Citrus Sinensis ID: 021674

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------31
Protein Sequence
MGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSPAMAVLCMACSQGTDAFSQSGLYSNHQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSWDDVFKVSVGLYLVGTAVWNLFSTGEKVVD
Secondary Structure (PSIPRED)
ccccccccHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHcccccccccccHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHcccccccc
Secondary Structure Prediction (SSPRO)
ccccccccHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHcccccccccccHHHHHccccHHHEEEHHHcccHHHHHHHHccHHHHHHHHcccccHcHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccEEEEEEEEEHHccHHHHcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHccccHHcc
Coil and Loop (DISEMBL)
mgigegvampamNNILSKWVPVAERSRSLALVYSGMYlgsvtglafspflihrfgwpsvfysfgslGTVWFTVWLSkahsspaedpqlrpaeKKLIVSscaskepvktipwglilskppvWALIVSHFCHnwgtfilltwmptyynqVLHFNltesglfcvlpwLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIgflgpaffltqlshvdspAMAVLCMACsqgtdafsqsglysnhqdiaprySGVLLGLSNTAGVLAGVFGTAATGYilqhgswddvFKVSVGLYLVGTAVWNLFSTGEKVVD
Flexible Loop (DISEMBL)
mgigegvampAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVWLSKAHsspaedpqlrpAEKKLIVSscaskepvktipwglilSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSPAMAVLCMACSQGTDAFSQSGLYSNHQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSWDDVFKVSVGLYLVGTAVWnlfstgekvvd
Low Complexity Region (SEG)
MGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSPAMAVLCMACSQGTDAFSQSGLYSNHQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSWDDVFKVSVGLYLVGTAVWNLFSTGEKVVD
Disordered region (IsUnstruct)
**********AMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVWLS*******************IVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSPAMAVLCMACSQGTDAFSQSGLYSNHQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSWDDVFKVSVGLYLVGTAVWNLFST******
Disordered Region (DISOPRED)
MGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVWLSKAHSSPAEDPQLRP*********************GLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSPAMAVLCMACSQGTDAFSQSGLYSNHQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSWDDVFKVSVGLYLVGTAVWNLFSTGEKVV*
Disordered Region (DISEMBL)
MGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVWLSKA**********RPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSPAMAVLCMACSQGTDAFSQSGLYSNHQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSWDDVFKVSVGLYLVGTAVWNLFSTGEKVVD
Disordered Region (DISPRO)
**IGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSPAMAVLCMACSQGTDAFSQSGLYSNHQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSWDDVFKVSVGLYLVGTAVWNLFSTGEKV**
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHiiiiiii
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooooo
Transmembrane Helix (MEMSAT)
oooHHHHHHHHHHHHHHHHHHHHiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHHiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHoooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHiiiiiiii
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSPAMAVLCMACSQGTDAFSQSGLYSNHQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSWDDVFKVSVGLYLVGTAVWNLFSTGEKVVD
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	309	2.2.26 [Sep-21-2011]
Q9SDI4	529	Probable anion transporte	yes	no	1.0	0.584	0.889	1e-160
O82390	512	Sodium-dependent phosphat	yes	no	1.0	0.603	0.860	1e-158
Q8GX78	541	Probable anion transporte	no	no	1.0	0.571	0.828	1e-152
Q652N5	591	Probable anion transporte	no	no	1.0	0.522	0.831	1e-151
Q7XJR2	512	Probable anion transporte	no	no	0.983	0.593	0.412	6e-63
Q66GI9	533	Probable anion transporte	no	no	0.993	0.575	0.4	1e-62
Q8W0H5	519	Probable anion transporte	no	no	0.993	0.591	0.384	1e-61
Q53WP9	535	Probable anion transporte	no	no	0.996	0.575	0.385	1e-57
Q3E9A0	517	Probable anion transporte	no	no	0.967	0.578	0.401	1e-55
Q53P54	428	Probable anion transporte	no	no	1.0	0.721	0.350	3e-55

>sp|Q9SDI4|PHT41_ORYSJ Probable anion transporter 1, chloroplastic OS=Oryza sativa subsp. japonica GN=PHT4;1 PE=2 SV=1

 Score =  565 bits (1455), Expect = e-160,   Method: Compositional matrix adjust.
 Identities = 275/309 (88%), Positives = 285/309 (92%)

Query: 1   MGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVF 60
           MG+GEGVAMPAMNNILSKWVPV+ERSRSLALVYSGMYLGSVTGLAFSP LIH FGWPSVF
Sbjct: 221 MGVGEGVAMPAMNNILSKWVPVSERSRSLALVYSGMYLGSVTGLAFSPLLIHNFGWPSVF 280

Query: 61  YSFGSLGTVWFTVWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPV 120
           YSFGSLG  WF+ W SKA+SSP EDP +   EKKLI S     EPVK IPWGLILSKPPV
Sbjct: 281 YSFGSLGVFWFSTWASKAYSSPLEDPGISAEEKKLITSQTTGGEPVKEIPWGLILSKPPV 340

Query: 121 WALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADT 180
           WALIVSHFCHNWGTFILLTWMPTYYNQVL FNLTESGLFCVLPWLTMA SAN GGWIADT
Sbjct: 341 WALIVSHFCHNWGTFILLTWMPTYYNQVLKFNLTESGLFCVLPWLTMAVSANFGGWIADT 400

Query: 181 LVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSPAMAVLCMACSQGTDAFSQSGLYSN 240
           LVS+GLSVTTVRKIMQSIGFLGPAFFLTQLSH+DSPAMAVLCMACSQGTDAFSQSGLYSN
Sbjct: 401 LVSRGLSVTTVRKIMQSIGFLGPAFFLTQLSHIDSPAMAVLCMACSQGTDAFSQSGLYSN 460

Query: 241 HQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSWDDVFKVSVGLYLVGTAVWNL 300
           HQDI PRY+GVLLGLSNTAGVLAGVFGTAATGYILQHGSWDDVFKVSV LYLVGT VWNL
Sbjct: 461 HQDIGPRYAGVLLGLSNTAGVLAGVFGTAATGYILQHGSWDDVFKVSVVLYLVGTLVWNL 520

Query: 301 FSTGEKVVD 309
           FSTGEK++D
Sbjct: 521 FSTGEKIID 529

Probable anion transporter.
Oryza sativa subsp. japonica (taxid: 39947)

>sp|O82390|ANTR1_ARATH Sodium-dependent phosphate transport protein 1, chloroplastic OS=Arabidopsis thaliana GN=ANTR1 PE=1 SV=1

 Score =  556 bits (1434), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 266/309 (86%), Positives = 283/309 (91%)

Query: 1   MGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVF 60
           MG+GEGVAMPAMNNILSKWVPV ERSRSLALVYSGMYLGSVTGLAFSPFLIH+FGWPSVF
Sbjct: 204 MGVGEGVAMPAMNNILSKWVPVQERSRSLALVYSGMYLGSVTGLAFSPFLIHQFGWPSVF 263

Query: 61  YSFGSLGTVWFTVWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPV 120
           YSFGSLGTVW T+WL+KA SSP EDP L P E+KLI  +CASKEPVK+IPW LILSKPPV
Sbjct: 264 YSFGSLGTVWLTLWLTKAESSPLEDPTLLPEERKLIADNCASKEPVKSIPWRLILSKPPV 323

Query: 121 WALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADT 180
           WALI  HFCHNWGTFILLTWMPTYY+QVL FNL ESGL  V PW+TMA SAN GGWIADT
Sbjct: 324 WALISCHFCHNWGTFILLTWMPTYYHQVLKFNLMESGLLSVFPWMTMAISANAGGWIADT 383

Query: 181 LVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSPAMAVLCMACSQGTDAFSQSGLYSN 240
           LVS+G SVT VRKIMQ+IGFLGPAFFLTQL H+DSP MAVLCMACSQGTDAFSQSGLYSN
Sbjct: 384 LVSRGFSVTNVRKIMQTIGFLGPAFFLTQLKHIDSPTMAVLCMACSQGTDAFSQSGLYSN 443

Query: 241 HQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSWDDVFKVSVGLYLVGTAVWNL 300
           HQDIAPRYSGVLLGLSNTAGVLAGV GTAATG+ILQHGSWDDVF +SVGLYLVGT +WNL
Sbjct: 444 HQDIAPRYSGVLLGLSNTAGVLAGVLGTAATGHILQHGSWDDVFTISVGLYLVGTVIWNL 503

Query: 301 FSTGEKVVD 309
           FSTGEK++D
Sbjct: 504 FSTGEKIID 512

Specific for inorganic phosphate transport across the thylakoid membrane in a sodium dependent manner. Binds glutamate but cannot transport it.

Arabidopsis thaliana (taxid: 3702)

>sp|Q8GX78|ANTR2_ARATH Probable anion transporter 2, chloroplastic OS=Arabidopsis thaliana GN=ANTR2 PE=2 SV=1

 Score =  538 bits (1387), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 256/309 (82%), Positives = 281/309 (90%)

Query: 1   MGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVF 60
           MGIGEGVAMPAMNN+LSKW+PV+ERSRSLALVYSGMYLGSVTGLAFSP LI +FGWPSVF
Sbjct: 233 MGIGEGVAMPAMNNMLSKWIPVSERSRSLALVYSGMYLGSVTGLAFSPMLITKFGWPSVF 292

Query: 61  YSFGSLGTVWFTVWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPV 120
           YSFGSLG++WF +WL  A+SSP +DP L   EKK+I+     +EPV  IPW LILSKPPV
Sbjct: 293 YSFGSLGSIWFLLWLKFAYSSPKDDPDLSEEEKKVILGGSKPREPVTVIPWKLILSKPPV 352

Query: 121 WALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADT 180
           WALI+SHFCHNWGTFILLTWMPTYYNQVL FNLTESGL CVLPWLTMA  AN+GGWIADT
Sbjct: 353 WALIISHFCHNWGTFILLTWMPTYYNQVLKFNLTESGLLCVLPWLTMAVFANIGGWIADT 412

Query: 181 LVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSPAMAVLCMACSQGTDAFSQSGLYSN 240
           LVS+GLS+T VRKIMQSIGFLGPAFFL+QLSHV +PAMAVLCMACSQG+DAFSQSGLYSN
Sbjct: 413 LVSRGLSITNVRKIMQSIGFLGPAFFLSQLSHVKTPAMAVLCMACSQGSDAFSQSGLYSN 472

Query: 241 HQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSWDDVFKVSVGLYLVGTAVWNL 300
           HQDI PRY+GVLLGLSNTAGVLAGVFGTAATGYILQ GSWDDVFKV+V LYL+GT VWNL
Sbjct: 473 HQDIGPRYAGVLLGLSNTAGVLAGVFGTAATGYILQRGSWDDVFKVAVALYLIGTLVWNL 532

Query: 301 FSTGEKVVD 309
           F+TGEK++D
Sbjct: 533 FATGEKILD 541

Inorganic phosphate and probable anion transporter.

Arabidopsis thaliana (taxid: 3702)

>sp|Q652N5|PHT44_ORYSJ Probable anion transporter 4, chloroplastic OS=Oryza sativa subsp. japonica GN=PHT4;4 PE=2 SV=1

 Score =  533 bits (1372), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 257/309 (83%), Positives = 279/309 (90%)

Query: 1   MGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVF 60
           MGIGEGVAMPAMNNILSKWVPV+ERSRSLALVYSGMYLGSVTGLAFSP LI RFGWPSVF
Sbjct: 283 MGIGEGVAMPAMNNILSKWVPVSERSRSLALVYSGMYLGSVTGLAFSPLLISRFGWPSVF 342

Query: 61  YSFGSLGTVWFTVWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPV 120
           Y+FGSLG+VWF +W  KAHSSP+EDP+L  AEK+ I+     KEPV +IPW LILSKPPV
Sbjct: 343 YAFGSLGSVWFALWQRKAHSSPSEDPELSKAEKRYILGGSTLKEPVTSIPWKLILSKPPV 402

Query: 121 WALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADT 180
           WALIVSHFCHNWGTFILLTWMPTYYNQVL FNLTESGL CVLPWLTMA  AN+GGWIADT
Sbjct: 403 WALIVSHFCHNWGTFILLTWMPTYYNQVLKFNLTESGLLCVLPWLTMAIFANIGGWIADT 462

Query: 181 LVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSPAMAVLCMACSQGTDAFSQSGLYSN 240
           LV +G+S+T VRKIMQSIGFLGPA FLT LS V +PAMAVLCMACSQG+DAFSQSGLYSN
Sbjct: 463 LVGRGVSITNVRKIMQSIGFLGPALFLTLLSKVRTPAMAVLCMACSQGSDAFSQSGLYSN 522

Query: 241 HQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSWDDVFKVSVGLYLVGTAVWNL 300
           HQDI PRY+GVLLGLSNTAGVLAGVFGTAATGYILQ GSWD VF+V+V LY+VGT VWN+
Sbjct: 523 HQDIGPRYAGVLLGLSNTAGVLAGVFGTAATGYILQKGSWDSVFQVAVVLYIVGTVVWNV 582

Query: 301 FSTGEKVVD 309
           FSTGEKV++
Sbjct: 583 FSTGEKVLE 591

Probable anion transporter.

Oryza sativa subsp. japonica (taxid: 39947)

>sp|Q7XJR2|ANTR3_ARATH Probable anion transporter 3, chloroplastic OS=Arabidopsis thaliana GN=ANTR3 PE=2 SV=2

 Score =  241 bits (614), Expect = 6e-63,   Method: Compositional matrix adjust.
 Identities = 129/313 (41%), Positives = 187/313 (59%), Gaps = 9/313 (2%)

Query: 2   GIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFY 61
           G+ EGVAMP+M  +LS+W P+ ER+ ++ +  +G ++G+V GL  +P ++   G    F 
Sbjct: 201 GLAEGVAMPSMTTLLSRWFPMDERASAVGISMAGFHMGNVVGLLLTPLMLSSIGISGPFI 260

Query: 62  SFGSLGTVWFTVWLSKAHSSPAEDPQLRPAEKKLIVS------SCASKEPVKTIPWGLIL 115
            F SLG +W + W S   ++P + P +  +E +LI +      S  S +P  ++   L+L
Sbjct: 261 LFASLGLLWVSTWSSGVTNNPQDSPFITRSELRLIQAGKPVQPSTISPKPNPSLR--LLL 318

Query: 116 SKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGG 175
           SK P WA+I ++  +NWG F+LL+WMP Y+  V + NL ++  F  LPW TMA S    G
Sbjct: 319 SKLPTWAIIFANVTNNWGYFVLLSWMPVYFQTVFNVNLKQAAWFSALPWATMAISGYYAG 378

Query: 176 WIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSPAMAVLCMACSQGTDAFSQS 235
             +D L+  G SVT+VRKIMQSIGF+GP   L  L+   SP+ A + M  +    +FSQ+
Sbjct: 379 AASDFLIRTGHSVTSVRKIMQSIGFMGPGLSLLCLNFAKSPSCAAVFMTIALSLSSFSQA 438

Query: 236 GLYSNHQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQ-HGSWDDVFKVSVGLYLVG 294
           G   N QDIAP+Y+G L G+SN AG LA +  T  TGY +Q  GS+     V+  LY   
Sbjct: 439 GFLLNMQDIAPQYAGFLHGISNCAGTLAAIVSTIGTGYFVQWLGSFQAFLTVTAFLYFAT 498

Query: 295 TAVWNLFSTGEKV 307
           T  W LF+TGE+V
Sbjct: 499 TVFWLLFATGERV 511

Inorganic phosphate and probable anion transporter.

Arabidopsis thaliana (taxid: 3702)

>sp|Q66GI9|ANTR4_ARATH Probable anion transporter 4, chloroplastic OS=Arabidopsis thaliana GN=ANTR4 PE=2 SV=1

 Score =  240 bits (612), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 126/315 (40%), Positives = 191/315 (60%), Gaps = 8/315 (2%)

Query: 1   MGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVF 60
           +G+ EGVA+P MNN++++W P  ERSR++ +  +G  LG+V GL  SP L+ + G    F
Sbjct: 213 VGVAEGVALPCMNNMVARWFPPTERSRAVGIAMAGFQLGNVVGLMLSPILMSQGGIYGPF 272

Query: 61  YSFGSLGTVWFTVWLSKAHSSPAEDPQLRPAE-----KKLIVSSCASKEPVKT--IPWGL 113
             FG  G +W  VWLS   S+P   PQ+  +E     +K  +S+  +K    +   P+G 
Sbjct: 273 VIFGLSGFLWLLVWLSATSSAPDRHPQITKSELEYIKQKKQISTMENKRISTSGIPPFGR 332

Query: 114 ILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANL 173
           +LSK P WA+IV++  H+WG F++L+WMP Y+N V H NL ++  F  +PW  MAF+  +
Sbjct: 333 LLSKMPTWAVIVANSMHSWGFFVILSWMPIYFNSVYHVNLKQAAWFSAVPWSMMAFTGYI 392

Query: 174 GGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSPAMAVLCMACSQGTDAFS 233
            G+ +D L+ +G S+T  RKIMQSIGF+GP   L  L+    P +A   ++ + G  +FS
Sbjct: 393 AGFWSDLLIRRGTSITLTRKIMQSIGFIGPGIALIGLTTAKQPLVASAWLSLAVGLKSFS 452

Query: 234 QSGLYSNHQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQ-HGSWDDVFKVSVGLYL 292
             G   N Q+IAP YSGVL G+  TAG LA + GT   G+ ++  GS+     ++  LYL
Sbjct: 453 HLGFLINLQEIAPEYSGVLHGMCLTAGTLAAIVGTVGAGFFVELLGSFQGFILLTAILYL 512

Query: 293 VGTAVWNLFSTGEKV 307
           +    +N+++TGE+V
Sbjct: 513 LSALFYNIYATGERV 527

Inorganic phosphate and probable anion transporter.

Arabidopsis thaliana (taxid: 3702)

>sp|Q8W0H5|PHT43_ORYSJ Probable anion transporter 3, chloroplastic OS=Oryza sativa subsp. japonica GN=PHT4;3 PE=2 SV=1

 Score =  236 bits (603), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 121/315 (38%), Positives = 182/315 (57%), Gaps = 8/315 (2%)

Query: 1   MGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVF 60
           +G+ EGVA+P+MNN++ +W P  ERS ++ +  +G  LG+  GL  SP ++ R G    F
Sbjct: 199 LGMAEGVALPSMNNMVLRWFPRTERSSAVGIAMAGFQLGNTIGLLLSPIIMSRAGIFGPF 258

Query: 61  YSFGSLGTVWFTVWLSKAHSSPAEDPQLRPAE-------KKLIVSSCASKEPVKTIPWGL 113
             FG  G +W  VW+S    +P E+ Q+   E       +KL+ +    +   K  P+  
Sbjct: 259 VIFGLFGFLWVLVWISAISGTPGENAQISAHELDYITRGQKLVKTQSGGERLRKVPPFSK 318

Query: 114 ILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANL 173
           +LSK P WALI ++  H+WG F++L+WMP Y+  + H NL E+  F  LPW+ MA    +
Sbjct: 319 LLSKWPTWALISANAMHSWGYFVILSWMPVYFKTIYHVNLREAAWFSALPWVMMAVLGYV 378

Query: 174 GGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSPAMAVLCMACSQGTDAFS 233
            G ++D L+  G S+T  RKIMQ+IGF+GP   L  L+   SP +A   +  + G  +F 
Sbjct: 379 AGVVSDRLIQNGTSITLTRKIMQTIGFVGPGVALLGLNAAKSPVIASAWLTIAVGLKSFG 438

Query: 234 QSGLYSNHQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQH-GSWDDVFKVSVGLYL 292
            SG   N Q+IAP+Y+GVL G+SNTAG  A + GT   G+ +   GS+     ++  LY 
Sbjct: 439 HSGFLVNLQEIAPQYAGVLHGMSNTAGTFAAILGTVGAGFFVDRMGSFRGFLILTSLLYF 498

Query: 293 VGTAVWNLFSTGEKV 307
             T  W++F+TGE+V
Sbjct: 499 SSTLFWDIFATGERV 513

Probable anion transporter.

Oryza sativa subsp. japonica (taxid: 39947)

>sp|Q53WP9|PHT42_ORYSJ Probable anion transporter 2, chloroplastic OS=Oryza sativa subsp. japonica GN=PHT4;2 PE=2 SV=1

 Score =  223 bits (569), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 120/311 (38%), Positives = 176/311 (56%), Gaps = 3/311 (0%)

Query: 2   GIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFY 61
           G+ EGVA P M+  L KW P  ER+ ++ +   G +LG+V     +P ++   G    F 
Sbjct: 225 GLAEGVAFPTMSTFLPKWFPTHERATAVGISMGGFHLGNVISFLATPIIMSHIGLAGTFA 284

Query: 62  SFGSLGTVWFTVWLSKAHSSPAEDPQLRPAEKKLIVS-SCASKEPVKTIP-WGLILSKPP 119
            F SLG +W +VWL    S P +   +  +E +LI++   ASK      P    ILSK  
Sbjct: 285 FFASLGYLWLSVWLFNVESDPLDSRTISKSELQLILAGRSASKIQGSKFPSLREILSKIE 344

Query: 120 VWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIAD 179
           +WA+IV++  +NWG F+LL+WMP Y+  V + NL ++  F  +PW  MA S  + G  AD
Sbjct: 345 MWAIIVANVVNNWGYFVLLSWMPVYFKTVYNVNLKQAAWFSAIPWAVMALSGYVAGASAD 404

Query: 180 TLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSPAMAVLCMACSQGTDAFSQSGLYS 239
            L+  G SV  VRKIMQSIGF+GP   L  L    +P++A + M  +    +FSQ+G + 
Sbjct: 405 FLIKSGFSVALVRKIMQSIGFIGPGVSLLCLRFAQTPSVAAVLMTIALSLSSFSQAGYFC 464

Query: 240 NHQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQ-HGSWDDVFKVSVGLYLVGTAVW 298
           N QDIAP+Y+G L GL+N  G +A +  T  TGY +Q  GS+     ++  LY   T  +
Sbjct: 465 NVQDIAPKYAGSLHGLTNGIGTVAAIVSTIGTGYFVQWLGSFQAFLTLTAVLYFSATVFY 524

Query: 299 NLFSTGEKVVD 309
           N ++TG+ + D
Sbjct: 525 NTYATGDLIFD 535

Probable anion transporter.

Oryza sativa subsp. japonica (taxid: 39947)

>sp|Q3E9A0|ANTR6_ARATH Probable anion transporter 6, chloroplastic OS=Arabidopsis thaliana GN=ANTR6 PE=2 SV=1

 Score =  216 bits (551), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 127/316 (40%), Positives = 184/316 (58%), Gaps = 17/316 (5%)

Query: 1   MGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVF 60
           +GIGEGV+  A  +++++ +PV ERSR++  V+ G+ LGSV GL  +P +I  F W SVF
Sbjct: 199 VGIGEGVSPSAATDLIARTIPVKERSRAVGFVFGGLSLGSVMGLLLAPPIIETFNWESVF 258

Query: 61  YSFGSLGTVWFT--VWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPV----KTIPWGLI 114
           Y FG LG  WF    +L++   S  +  ++  + K    S  A+KE +    K IPW   
Sbjct: 259 YLFGLLGVGWFVGFQFLNEEEVS-YKGNEISTSHK----SENATKEELGSSLKEIPWKSF 313

Query: 115 LSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLG 174
              P VWA+I +HFC +WG +  L+W+PTY+++ L  NLTE+    +LP L      +L 
Sbjct: 314 FQSPAVWAMIYTHFCGSWGHYTCLSWLPTYFSEALSLNLTEAAWVSILPPLASIVVTSLA 373

Query: 175 GWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVD---SPAMAVLCMACSQGTDA 231
              AD L++ G+  TTVRKI Q+I F+ PA  +T LS VD    P   V  +       +
Sbjct: 374 SQFADYLITNGVDTTTVRKICQTIAFVAPAICMT-LSSVDIGLPPWEIVGILTAGLALSS 432

Query: 232 FSQSGLYSNHQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQHG-SWD-DVFKVSVG 289
           F+ SGLY  HQDI+P Y+ +LLG++NT G + G+ G A TG++L    SW   +F  S+ 
Sbjct: 433 FALSGLYCTHQDISPEYASILLGITNTVGAVPGIVGVALTGFLLDSTHSWTMSLFVPSIF 492

Query: 290 LYLVGTAVWNLFSTGE 305
            YL GT VW  F++ E
Sbjct: 493 FYLTGTVVWLAFASSE 508

Inorganic phosphate and probable anion transporter.

Arabidopsis thaliana (taxid: 3702)

>sp|Q53P54|PHT46_ORYSJ Probable anion transporter 6 OS=Oryza sativa subsp. japonica GN=PHT4;6 PE=2 SV=1

 Score =  215 bits (548), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 113/322 (35%), Positives = 184/322 (57%), Gaps = 13/322 (4%)

Query: 1   MGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVF 60
           +G+ +G+  P+++ +L++WVP  ERSRS++L  SGMYLG+  G+   P L+   G  SVF
Sbjct: 107 VGVAQGLIFPSIHTVLAQWVPPQERSRSVSLTTSGMYLGAACGMLLLPSLVKNMGPQSVF 166

Query: 61  YSFGSLGTVWFTVWLSKAHSSPAED-PQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPP 119
                LG  W  +W   A   P  D P++   +K  + +          IPW  IL   P
Sbjct: 167 SVEAMLGVAWLLIWFKFASDPPRTDLPKVASKDKMKVQTGGIMAPRTVKIPWARILFSLP 226

Query: 120 VWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIAD 179
           +WA++V++F  ++  ++L+ W+PTY+   L  +L + G   +LP+L M   +N+GG +AD
Sbjct: 227 IWAIVVNNFTFHYALYVLMNWLPTYFKLGLQLSLQDMGFSKMLPYLNMFLFSNIGGVLAD 286

Query: 180 TLVSKG-LSVTTVRKIMQSIGFLGPAFFLTQLSHVDSPAMAVLCMACSQGTDAFSQSGLY 238
            L+++  LSVT  RK++ ++GF+  A  L  L    +P+ A+ C + S G  A  ++G  
Sbjct: 287 HLITRKILSVTKTRKLLNTVGFVVSAIALMALPLFRTPSGAIFCSSVSLGFLALGRAGFA 346

Query: 239 SNHQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQHG-----------SWDDVFKVS 287
            NH D+AP+++G+++G+SNTAG LAG+ G   TG IL+             SW  VF V 
Sbjct: 347 VNHMDVAPKFAGIVMGISNTAGTLAGIVGVGLTGRILEAAKASNMDLTSSESWRTVFFVP 406

Query: 288 VGLYLVGTAVWNLFSTGEKVVD 309
             L +  + ++ +FSTGEK+ +
Sbjct: 407 GYLCIFSSFIFLIFSTGEKIFE 428

Probable anion transporter.

Oryza sativa subsp. japonica (taxid: 39947)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	309
224104305	520	predicted protein [Populus trichocarpa]	1.0	0.594	0.932	1e-166
449467759	356	PREDICTED: probable anion transporter 1,	1.0	0.867	0.928	1e-166
224054558	431	predicted protein [Populus trichocarpa]	1.0	0.716	0.928	1e-166
449515105	528	PREDICTED: sodium-dependent phosphate tr	1.0	0.585	0.925	1e-165
255569283	530	Sodium-dependent phosphate transport pro	1.0	0.583	0.912	1e-164
356566171	395	PREDICTED: probable anion transporter 1,	1.0	0.782	0.912	1e-164
225434656	514	PREDICTED: sodium-dependent phosphate tr	1.0	0.601	0.915	1e-163
356539597	511	PREDICTED: sodium-dependent phosphate tr	1.0	0.604	0.906	1e-163
358346124	516	Sodium-dependent phosphate transport pro	1.0	0.598	0.893	1e-162
388500962	516	unknown [Medicago truncatula]	1.0	0.598	0.893	1e-162

>gi|224104305|ref|XP_002313389.1| predicted protein [Populus trichocarpa] gi|222849797|gb|EEE87344.1| predicted protein [Populus trichocarpa]

 Score =  591 bits (1524), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 288/309 (93%), Positives = 298/309 (96%)

Query: 1   MGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVF 60
           MGIGEGVAMPAMNNILSKWVPV+ERSRSLA VYSGMYLGSVTGLAFSPFLIH+FGWPSVF
Sbjct: 212 MGIGEGVAMPAMNNILSKWVPVSERSRSLAFVYSGMYLGSVTGLAFSPFLIHQFGWPSVF 271

Query: 61  YSFGSLGTVWFTVWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPV 120
           YSFGSLGTVWF  WLSKAHSSP +DPQLRPAEKKLI ++  SKEPV++IPW LILSK PV
Sbjct: 272 YSFGSLGTVWFAAWLSKAHSSPLDDPQLRPAEKKLIFANSFSKEPVESIPWRLILSKAPV 331

Query: 121 WALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADT 180
           WALIVSHFCHNWGTFILLTWMPTYYNQVL FNLTESGLFCVLPWLTMAFSANLGGWIADT
Sbjct: 332 WALIVSHFCHNWGTFILLTWMPTYYNQVLKFNLTESGLFCVLPWLTMAFSANLGGWIADT 391

Query: 181 LVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSPAMAVLCMACSQGTDAFSQSGLYSN 240
           LVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSH+DSPAMAVLCMACSQGTDAFSQSGLYSN
Sbjct: 392 LVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHIDSPAMAVLCMACSQGTDAFSQSGLYSN 451

Query: 241 HQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSWDDVFKVSVGLYLVGTAVWNL 300
           HQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSWDDVFKVSVGLYLVGT VWNL
Sbjct: 452 HQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSWDDVFKVSVGLYLVGTVVWNL 511

Query: 301 FSTGEKVVD 309
           FSTGEK++D
Sbjct: 512 FSTGEKILD 520

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449467759|ref|XP_004151590.1| PREDICTED: probable anion transporter 1, chloroplastic-like, partial [Cucumis sativus]

 Score =  589 bits (1519), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 287/309 (92%), Positives = 298/309 (96%)

Query: 1   MGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVF 60
           MGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIH++GWPSVF
Sbjct: 48  MGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHQYGWPSVF 107

Query: 61  YSFGSLGTVWFTVWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPV 120
           +SFGSLG VWF VWL+KAHSSP +DPQLRP EKKLI +S  SKEPVK+IPWG ILSKPPV
Sbjct: 108 FSFGSLGAVWFAVWLNKAHSSPLDDPQLRPQEKKLIFASSVSKEPVKSIPWGTILSKPPV 167

Query: 121 WALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADT 180
           WALIVSHFCHNWGTFILLTWMPTYY+QVL FNLTESGL CVLPWLTMAFSANLGGWIADT
Sbjct: 168 WALIVSHFCHNWGTFILLTWMPTYYHQVLKFNLTESGLLCVLPWLTMAFSANLGGWIADT 227

Query: 181 LVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSPAMAVLCMACSQGTDAFSQSGLYSN 240
           LVS+GLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSPAMAVLCMACSQGTDAFSQSGLYSN
Sbjct: 228 LVSRGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSPAMAVLCMACSQGTDAFSQSGLYSN 287

Query: 241 HQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSWDDVFKVSVGLYLVGTAVWNL 300
           HQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSWDDVFKVSVGLYLVGT VWNL
Sbjct: 288 HQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSWDDVFKVSVGLYLVGTVVWNL 347

Query: 301 FSTGEKVVD 309
           FSTGEK++D
Sbjct: 348 FSTGEKILD 356

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224054558|ref|XP_002298320.1| predicted protein [Populus trichocarpa] gi|222845578|gb|EEE83125.1| predicted protein [Populus trichocarpa]

 Score =  589 bits (1519), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 287/309 (92%), Positives = 298/309 (96%)

Query: 1   MGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVF 60
           MGIGEGVAMPAMN ILSKWVPV+ERSRSLALVYSGMYLGSVTGL FSPFLIH+FGWPSVF
Sbjct: 123 MGIGEGVAMPAMNTILSKWVPVSERSRSLALVYSGMYLGSVTGLGFSPFLIHQFGWPSVF 182

Query: 61  YSFGSLGTVWFTVWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPV 120
           YSFGSLGTVWF  WLSKAHSSP +DPQLRP EKKLI ++ +SKEPVK+IPWGLILSK PV
Sbjct: 183 YSFGSLGTVWFAAWLSKAHSSPLDDPQLRPEEKKLIFANSSSKEPVKSIPWGLILSKGPV 242

Query: 121 WALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADT 180
           WALIVSHFCHNWGTFILLTWMPTYYNQVL FNLTESGLFCVLPWLTMAFSANLGGWIADT
Sbjct: 243 WALIVSHFCHNWGTFILLTWMPTYYNQVLKFNLTESGLFCVLPWLTMAFSANLGGWIADT 302

Query: 181 LVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSPAMAVLCMACSQGTDAFSQSGLYSN 240
           LVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSH+DSPAMAVLCMACSQGTDAFSQSGLYSN
Sbjct: 303 LVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHIDSPAMAVLCMACSQGTDAFSQSGLYSN 362

Query: 241 HQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSWDDVFKVSVGLYLVGTAVWNL 300
           HQDIAPRYSGVLLGLSNTAGVLAGVFGTA+TGYILQHGSWDDVFKVSVGLYLVGT VWNL
Sbjct: 363 HQDIAPRYSGVLLGLSNTAGVLAGVFGTASTGYILQHGSWDDVFKVSVGLYLVGTVVWNL 422

Query: 301 FSTGEKVVD 309
           FSTGEK++D
Sbjct: 423 FSTGEKILD 431

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449515105|ref|XP_004164590.1| PREDICTED: sodium-dependent phosphate transport protein 1, chloroplastic-like [Cucumis sativus]

 Score =  587 bits (1513), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 286/309 (92%), Positives = 298/309 (96%)

Query: 1   MGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVF 60
           MGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIH++GWPSVF
Sbjct: 220 MGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHQYGWPSVF 279

Query: 61  YSFGSLGTVWFTVWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPV 120
           +SFGSLG VWF VWL+KAHSSP +DPQLRP EKKLI ++  SKEPVK+IPWG ILSKPPV
Sbjct: 280 FSFGSLGAVWFAVWLNKAHSSPLDDPQLRPQEKKLIFANSVSKEPVKSIPWGTILSKPPV 339

Query: 121 WALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADT 180
           WALIVSHFCHNWGTFILLTWMPTYY+QVL FNLTESGL CVLPWLTMAFSANLGGWIADT
Sbjct: 340 WALIVSHFCHNWGTFILLTWMPTYYHQVLKFNLTESGLLCVLPWLTMAFSANLGGWIADT 399

Query: 181 LVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSPAMAVLCMACSQGTDAFSQSGLYSN 240
           LVS+GLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSPAMAVLCMACSQGTDAFSQSGLYSN
Sbjct: 400 LVSRGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSPAMAVLCMACSQGTDAFSQSGLYSN 459

Query: 241 HQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSWDDVFKVSVGLYLVGTAVWNL 300
           HQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSWDDVFKVSVGLYLVGT VWNL
Sbjct: 460 HQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSWDDVFKVSVGLYLVGTVVWNL 519

Query: 301 FSTGEKVVD 309
           FSTGEK++D
Sbjct: 520 FSTGEKILD 528

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255569283|ref|XP_002525609.1| Sodium-dependent phosphate transport protein, putative [Ricinus communis] gi|223535045|gb|EEF36727.1| Sodium-dependent phosphate transport protein, putative [Ricinus communis]

 Score =  585 bits (1507), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 282/309 (91%), Positives = 297/309 (96%)

Query: 1   MGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVF 60
           MGIGEGVAMPAM NILSKWVPV+ERSRSLALVYSGMYLGSVTGLAFSPFLIH+FGWPSVF
Sbjct: 222 MGIGEGVAMPAMTNILSKWVPVSERSRSLALVYSGMYLGSVTGLAFSPFLIHQFGWPSVF 281

Query: 61  YSFGSLGTVWFTVWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPV 120
           YSFGSLGT+WF VWL+KA+SSP +DPQLRP EK+LI+++ A KEPVK IPWGLILSKPPV
Sbjct: 282 YSFGSLGTIWFAVWLNKAYSSPLDDPQLRPEEKQLIIANSACKEPVKVIPWGLILSKPPV 341

Query: 121 WALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADT 180
           WALIVSHFCHNWGTFILLTWMPTYYNQVL F+LTESGL CVLPWLTMAFSANLGGWIADT
Sbjct: 342 WALIVSHFCHNWGTFILLTWMPTYYNQVLKFDLTESGLVCVLPWLTMAFSANLGGWIADT 401

Query: 181 LVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSPAMAVLCMACSQGTDAFSQSGLYSN 240
           LVSKG SVTTVRKIMQ+IGFLGPAFFLTQLSH++SPAMAVLCM CSQGTDAFSQSGLYSN
Sbjct: 402 LVSKGYSVTTVRKIMQTIGFLGPAFFLTQLSHINSPAMAVLCMTCSQGTDAFSQSGLYSN 461

Query: 241 HQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSWDDVFKVSVGLYLVGTAVWNL 300
           HQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSWDDVFKVSVGLYLVGT VWNL
Sbjct: 462 HQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSWDDVFKVSVGLYLVGTVVWNL 521

Query: 301 FSTGEKVVD 309
           FSTGEK+VD
Sbjct: 522 FSTGEKIVD 530

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356566171|ref|XP_003551308.1| PREDICTED: probable anion transporter 1, chloroplastic-like [Glycine max]

 Score =  582 bits (1499), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 282/309 (91%), Positives = 297/309 (96%)

Query: 1   MGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVF 60
           MGIGEGVAMPAMNNILSKWVPV+ERSRSLALVYSGMYLGSVTGLAFSPFLIH+FGWPSVF
Sbjct: 87  MGIGEGVAMPAMNNILSKWVPVSERSRSLALVYSGMYLGSVTGLAFSPFLIHQFGWPSVF 146

Query: 61  YSFGSLGTVWFTVWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPV 120
           YSFGSLGTVWF+VWLSKAHSSP EDP+LRP EKKLI ++C+SKEPVKTIPW LILSKPPV
Sbjct: 147 YSFGSLGTVWFSVWLSKAHSSPLEDPELRPEEKKLITTNCSSKEPVKTIPWRLILSKPPV 206

Query: 121 WALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADT 180
           WALIVSHFCHNWGTFILLTWMPTYYNQVL FNLTESGLFCVLPWL MA SAN+GGWIADT
Sbjct: 207 WALIVSHFCHNWGTFILLTWMPTYYNQVLKFNLTESGLFCVLPWLIMAISANVGGWIADT 266

Query: 181 LVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSPAMAVLCMACSQGTDAFSQSGLYSN 240
           LVSKG+SVT VRKIMQ+IGFLGPAFFLTQLSHV+SP MAVLCM CSQGTDAFSQSGLYSN
Sbjct: 267 LVSKGVSVTRVRKIMQTIGFLGPAFFLTQLSHVNSPVMAVLCMTCSQGTDAFSQSGLYSN 326

Query: 241 HQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSWDDVFKVSVGLYLVGTAVWNL 300
           HQDIAPRYSG+LLGLSNTAGVLAGVFGTAATGYILQHGSWDDVFKVSV LYLVGT V+NL
Sbjct: 327 HQDIAPRYSGILLGLSNTAGVLAGVFGTAATGYILQHGSWDDVFKVSVVLYLVGTVVFNL 386

Query: 301 FSTGEKVVD 309
           FSTGEKV++
Sbjct: 387 FSTGEKVLE 395

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225434656|ref|XP_002279594.1| PREDICTED: sodium-dependent phosphate transport protein 1, chloroplastic [Vitis vinifera] gi|297745933|emb|CBI15989.3| unnamed protein product [Vitis vinifera]

 Score =  579 bits (1493), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 283/309 (91%), Positives = 293/309 (94%)

Query: 1   MGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVF 60
           MGIGEGVAMPAMNNILSKWVPV+ERSRSLALVYSGMYLGSVTGLAFSPFLIH FGWPSVF
Sbjct: 206 MGIGEGVAMPAMNNILSKWVPVSERSRSLALVYSGMYLGSVTGLAFSPFLIHSFGWPSVF 265

Query: 61  YSFGSLGTVWFTVWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPV 120
           YSFGSLGTVW   WLSKA+SSP EDP+L P EKKLIVS+  +KEPVK IPW LILSKPPV
Sbjct: 266 YSFGSLGTVWLATWLSKAYSSPLEDPELLPKEKKLIVSNSVTKEPVKKIPWRLILSKPPV 325

Query: 121 WALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADT 180
           WALI SHFCHNWGTFILLTWMPTYYNQVL FNLTESGLFCVLPWLTMAFSANLGGWIADT
Sbjct: 326 WALIGSHFCHNWGTFILLTWMPTYYNQVLKFNLTESGLFCVLPWLTMAFSANLGGWIADT 385

Query: 181 LVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSPAMAVLCMACSQGTDAFSQSGLYSN 240
           LVSKGLSVTTVRKIMQ+IGFLGPAFFLTQLSHV+SPAMAVLCMACSQGTDAFSQSGLYSN
Sbjct: 386 LVSKGLSVTTVRKIMQTIGFLGPAFFLTQLSHVNSPAMAVLCMACSQGTDAFSQSGLYSN 445

Query: 241 HQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSWDDVFKVSVGLYLVGTAVWNL 300
           HQDIAPRYSGVLLGLSNTAGVLAGV GT ATGYILQHGSWDDVFKVSVGLYLVGT +WNL
Sbjct: 446 HQDIAPRYSGVLLGLSNTAGVLAGVLGTGATGYILQHGSWDDVFKVSVGLYLVGTVIWNL 505

Query: 301 FSTGEKVVD 309
           FSTGEK++D
Sbjct: 506 FSTGEKILD 514

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356539597|ref|XP_003538283.1| PREDICTED: sodium-dependent phosphate transport protein 1, chloroplastic-like [Glycine max]

 Score =  578 bits (1490), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 280/309 (90%), Positives = 295/309 (95%)

Query: 1   MGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVF 60
           MGIGEGVAMPAMNNILSKWVPV+ERSRSLALVYSGMYLGSVTGLAFSPFLIH+FGWPSVF
Sbjct: 203 MGIGEGVAMPAMNNILSKWVPVSERSRSLALVYSGMYLGSVTGLAFSPFLIHQFGWPSVF 262

Query: 61  YSFGSLGTVWFTVWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPV 120
           YSFGSLGTVW +VWLSKAHSSP EDP+LRP EKKLI ++C+SKEPVKTIPW LILSKPPV
Sbjct: 263 YSFGSLGTVWCSVWLSKAHSSPLEDPELRPEEKKLITANCSSKEPVKTIPWRLILSKPPV 322

Query: 121 WALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADT 180
           WALIVSHFCHNWGTFILLTWMPTYYNQVL FNLTESGLFCVLPW  MA SAN+GGWIADT
Sbjct: 323 WALIVSHFCHNWGTFILLTWMPTYYNQVLKFNLTESGLFCVLPWFIMAISANVGGWIADT 382

Query: 181 LVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSPAMAVLCMACSQGTDAFSQSGLYSN 240
           LVSKGLSVT VRKIMQ+IGFLGPAFFLTQLSH +SP MAVLCM CSQGTDAFSQSGLYSN
Sbjct: 383 LVSKGLSVTRVRKIMQTIGFLGPAFFLTQLSHANSPVMAVLCMTCSQGTDAFSQSGLYSN 442

Query: 241 HQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSWDDVFKVSVGLYLVGTAVWNL 300
           HQDIAPRYSG+LLGLSNTAGVLAGVFGTAATGYILQHGSWDDVFKVSVGLYLVGT V+NL
Sbjct: 443 HQDIAPRYSGILLGLSNTAGVLAGVFGTAATGYILQHGSWDDVFKVSVGLYLVGTVVFNL 502

Query: 301 FSTGEKVVD 309
           FSTGEK+++
Sbjct: 503 FSTGEKILE 511

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|358346124|ref|XP_003637121.1| Sodium-dependent phosphate transport protein [Medicago truncatula] gi|355503056|gb|AES84259.1| Sodium-dependent phosphate transport protein [Medicago truncatula]

 Score =  578 bits (1490), Expect = e-162,   Method: Compositional matrix adjust.
 Identities = 276/309 (89%), Positives = 294/309 (95%)

Query: 1   MGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVF 60
           MGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIH++GWPSVF
Sbjct: 208 MGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHQYGWPSVF 267

Query: 61  YSFGSLGTVWFTVWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPV 120
           YSFGSLGTVWF +WLSKAHSSP +DP++RP EKKLI ++  SKEPVK IPWGLILSKPPV
Sbjct: 268 YSFGSLGTVWFCIWLSKAHSSPLDDPEMRPEEKKLIATNGFSKEPVKEIPWGLILSKPPV 327

Query: 121 WALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADT 180
           WALIVSHFCHNWGTFILLTWMPTYYNQVL FNLTESGLFCVLPWLTMA SAN GGWIADT
Sbjct: 328 WALIVSHFCHNWGTFILLTWMPTYYNQVLKFNLTESGLFCVLPWLTMAISANFGGWIADT 387

Query: 181 LVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSPAMAVLCMACSQGTDAFSQSGLYSN 240
           LV++G+SVT VRKIMQ++GFLGPAFFLTQLSH+DSP +AVLCM CSQGTDAFSQSGLYSN
Sbjct: 388 LVTRGVSVTRVRKIMQTVGFLGPAFFLTQLSHIDSPVVAVLCMTCSQGTDAFSQSGLYSN 447

Query: 241 HQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSWDDVFKVSVGLYLVGTAVWNL 300
           HQDIAPRYSG+LLGLSNTAGVLAGV GTAATGYILQHGSWDDVFKVSVGLYLVGT VWNL
Sbjct: 448 HQDIAPRYSGILLGLSNTAGVLAGVLGTAATGYILQHGSWDDVFKVSVGLYLVGTVVWNL 507

Query: 301 FSTGEKVVD 309
           FSTGEK++D
Sbjct: 508 FSTGEKIID 516

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388500962|gb|AFK38547.1| unknown [Medicago truncatula]

 Score =  578 bits (1490), Expect = e-162,   Method: Compositional matrix adjust.
 Identities = 276/309 (89%), Positives = 294/309 (95%)

Query: 1   MGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVF 60
           MGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIH++GWPSVF
Sbjct: 208 MGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHQYGWPSVF 267

Query: 61  YSFGSLGTVWFTVWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPV 120
           YSFGSLGTVWF +WLSKAHSSP +DP++RP EKKLI ++  SKEPVK IPWGLILSKPPV
Sbjct: 268 YSFGSLGTVWFCIWLSKAHSSPLDDPEMRPEEKKLIATNGFSKEPVKEIPWGLILSKPPV 327

Query: 121 WALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADT 180
           WALIVSHFCHNWGTFILLTWMPTYYNQVL FNLTESGLFCVLPWLTMA SAN GGWIADT
Sbjct: 328 WALIVSHFCHNWGTFILLTWMPTYYNQVLKFNLTESGLFCVLPWLTMAISANFGGWIADT 387

Query: 181 LVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSPAMAVLCMACSQGTDAFSQSGLYSN 240
           LV++G+SVT VRKIMQ++GFLGPAFFLTQLSH+DSP +AVLCM CSQGTDAFSQSGLYSN
Sbjct: 388 LVTRGVSVTRVRKIMQTVGFLGPAFFLTQLSHIDSPVVAVLCMTCSQGTDAFSQSGLYSN 447

Query: 241 HQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSWDDVFKVSVGLYLVGTAVWNL 300
           HQDIAPRYSG+LLGLSNTAGVLAGV GTAATGYILQHGSWDDVFKVSVGLYLVGT VWNL
Sbjct: 448 HQDIAPRYSGILLGLSNTAGVLAGVLGTAATGYILQHGSWDDVFKVSVGLYLVGTVVWNL 507

Query: 301 FSTGEKVVD 309
           FSTGEK++D
Sbjct: 508 FSTGEKIID 516

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	309
TAIR|locus:2060694	512	PHT4;1 "AT2G29650" [Arabidopsi	1.0	0.603	0.860	2.7e-148
TAIR|locus:2126066	541	ANTR2 "AT4G00370" [Arabidopsis	1.0	0.571	0.828	4.2e-143
TAIR|locus:2065615	512	PHT4;2 "AT2G38060" [Arabidopsi	0.983	0.593	0.412	3.8e-62
TAIR|locus:2149199	517	PHT4;5 "phosphate transporter	0.980	0.586	0.394	1.1e-57
UNIPROTKB|E1B7R3	495	SLC17A5 "Uncharacterized prote	0.983	0.614	0.354	8e-53
UNIPROTKB|Q9NRA2	495	SLC17A5 "Sialin" [Homo sapiens	0.983	0.614	0.361	8e-53
MGI|MGI:1924105	495	Slc17a5 "solute carrier family	0.983	0.614	0.361	3.5e-52
UNIPROTKB|E2R8R4	495	SLC17A5 "Uncharacterized prote	0.983	0.614	0.351	9.2e-52
UNIPROTKB|Q5ZL94	484	SLC17A5 "Uncharacterized prote	0.983	0.628	0.358	1.9e-51
ZFIN|ZDB-GENE-060929-1158	489	slc17a5 "solute carrier family	0.980	0.619	0.364	1.9e-51

TAIR|locus:2060694 PHT4;1 "AT2G29650" [Arabidopsis thaliana (taxid:3702)]

 Score = 1448 (514.8 bits), Expect = 2.7e-148, P = 2.7e-148
 Identities = 266/309 (86%), Positives = 283/309 (91%)

Query:     1 MGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVF 60
             MG+GEGVAMPAMNNILSKWVPV ERSRSLALVYSGMYLGSVTGLAFSPFLIH+FGWPSVF
Sbjct:   204 MGVGEGVAMPAMNNILSKWVPVQERSRSLALVYSGMYLGSVTGLAFSPFLIHQFGWPSVF 263

Query:    61 YSFGSLGTVWFTVWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPV 120
             YSFGSLGTVW T+WL+KA SSP EDP L P E+KLI  +CASKEPVK+IPW LILSKPPV
Sbjct:   264 YSFGSLGTVWLTLWLTKAESSPLEDPTLLPEERKLIADNCASKEPVKSIPWRLILSKPPV 323

Query:   121 WALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADT 180
             WALI  HFCHNWGTFILLTWMPTYY+QVL FNL ESGL  V PW+TMA SAN GGWIADT
Sbjct:   324 WALISCHFCHNWGTFILLTWMPTYYHQVLKFNLMESGLLSVFPWMTMAISANAGGWIADT 383

Query:   181 LVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSPAMAVLCMACSQGTDAFSQSGLYSN 240
             LVS+G SVT VRKIMQ+IGFLGPAFFLTQL H+DSP MAVLCMACSQGTDAFSQSGLYSN
Sbjct:   384 LVSRGFSVTNVRKIMQTIGFLGPAFFLTQLKHIDSPTMAVLCMACSQGTDAFSQSGLYSN 443

Query:   241 HQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSWDDVFKVSVGLYLVGTAVWNL 300
             HQDIAPRYSGVLLGLSNTAGVLAGV GTAATG+ILQHGSWDDVF +SVGLYLVGT +WNL
Sbjct:   444 HQDIAPRYSGVLLGLSNTAGVLAGVLGTAATGHILQHGSWDDVFTISVGLYLVGTVIWNL 503

Query:   301 FSTGEKVVD 309
             FSTGEK++D
Sbjct:   504 FSTGEKIID 512

GO:0005351 "sugar:hydrogen symporter activity" evidence=ISS

GO:0008514 "organic anion transmembrane transporter activity" evidence=ISS

GO:0009507 "chloroplast" evidence=ISM

GO:0015144 "carbohydrate transmembrane transporter activity" evidence=ISS

GO:0016020 "membrane" evidence=ISS

GO:0055085 "transmembrane transport" evidence=IEA

GO:0009624 "response to nematode" evidence=IEP

GO:0005315 "inorganic phosphate transmembrane transporter activity" evidence=IDA

GO:0009535 "chloroplast thylakoid membrane" evidence=IDA

GO:0009579 "thylakoid" evidence=IDA

GO:0030504 "inorganic diphosphate transmembrane transporter activity" evidence=IGI

GO:0009416 "response to light stimulus" evidence=IEP

GO:0000165 "MAPK cascade" evidence=RCA

GO:0006612 "protein targeting to membrane" evidence=RCA

GO:0009595 "detection of biotic stimulus" evidence=RCA

GO:0009697 "salicylic acid biosynthetic process" evidence=RCA

GO:0009862 "systemic acquired resistance, salicylic acid mediated signaling pathway" evidence=RCA

GO:0009867 "jasmonic acid mediated signaling pathway" evidence=RCA

GO:0010200 "response to chitin" evidence=RCA

GO:0010310 "regulation of hydrogen peroxide metabolic process" evidence=RCA

GO:0010363 "regulation of plant-type hypersensitive response" evidence=RCA

GO:0015706 "nitrate transport" evidence=RCA

GO:0031348 "negative regulation of defense response" evidence=RCA

GO:0042631 "cellular response to water deprivation" evidence=RCA

GO:0042742 "defense response to bacterium" evidence=RCA

GO:0043900 "regulation of multi-organism process" evidence=RCA

GO:0050832 "defense response to fungus" evidence=RCA

TAIR|locus:2126066 ANTR2 "AT4G00370" [Arabidopsis thaliana (taxid:3702)]

 Score = 1399 (497.5 bits), Expect = 4.2e-143, P = 4.2e-143
 Identities = 256/309 (82%), Positives = 281/309 (90%)

Query:     1 MGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVF 60
             MGIGEGVAMPAMNN+LSKW+PV+ERSRSLALVYSGMYLGSVTGLAFSP LI +FGWPSVF
Sbjct:   233 MGIGEGVAMPAMNNMLSKWIPVSERSRSLALVYSGMYLGSVTGLAFSPMLITKFGWPSVF 292

Query:    61 YSFGSLGTVWFTVWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPV 120
             YSFGSLG++WF +WL  A+SSP +DP L   EKK+I+     +EPV  IPW LILSKPPV
Sbjct:   293 YSFGSLGSIWFLLWLKFAYSSPKDDPDLSEEEKKVILGGSKPREPVTVIPWKLILSKPPV 352

Query:   121 WALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADT 180
             WALI+SHFCHNWGTFILLTWMPTYYNQVL FNLTESGL CVLPWLTMA  AN+GGWIADT
Sbjct:   353 WALIISHFCHNWGTFILLTWMPTYYNQVLKFNLTESGLLCVLPWLTMAVFANIGGWIADT 412

Query:   181 LVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSPAMAVLCMACSQGTDAFSQSGLYSN 240
             LVS+GLS+T VRKIMQSIGFLGPAFFL+QLSHV +PAMAVLCMACSQG+DAFSQSGLYSN
Sbjct:   413 LVSRGLSITNVRKIMQSIGFLGPAFFLSQLSHVKTPAMAVLCMACSQGSDAFSQSGLYSN 472

Query:   241 HQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSWDDVFKVSVGLYLVGTAVWNL 300
             HQDI PRY+GVLLGLSNTAGVLAGVFGTAATGYILQ GSWDDVFKV+V LYL+GT VWNL
Sbjct:   473 HQDIGPRYAGVLLGLSNTAGVLAGVFGTAATGYILQRGSWDDVFKVAVALYLIGTLVWNL 532

Query:   301 FSTGEKVVD 309
             F+TGEK++D
Sbjct:   533 FATGEKILD 541

GO:0008514 "organic anion transmembrane transporter activity" evidence=ISS

GO:0009507 "chloroplast" evidence=ISM;IDA

GO:0016021 "integral to membrane" evidence=IEA

GO:0055085 "transmembrane transport" evidence=IEA

GO:0009706 "chloroplast inner membrane" evidence=IDA

GO:0005315 "inorganic phosphate transmembrane transporter activity" evidence=IDA

GO:0009536 "plastid" evidence=IDA

GO:0009941 "chloroplast envelope" evidence=IDA

GO:0006098 "pentose-phosphate shunt" evidence=RCA

TAIR|locus:2065615 PHT4;2 "AT2G38060" [Arabidopsis thaliana (taxid:3702)]

 Score = 635 (228.6 bits), Expect = 3.8e-62, P = 3.8e-62
 Identities = 129/313 (41%), Positives = 187/313 (59%)

Query:     2 GIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFY 61
             G+ EGVAMP+M  +LS+W P+ ER+ ++ +  +G ++G+V GL  +P ++   G    F 
Sbjct:   201 GLAEGVAMPSMTTLLSRWFPMDERASAVGISMAGFHMGNVVGLLLTPLMLSSIGISGPFI 260

Query:    62 SFGSLGTVWFTVWLSKAHSSPAEDPQLRPAEKKLIVS------SCASKEPVKTIPWGLIL 115
              F SLG +W + W S   ++P + P +  +E +LI +      S  S +P  ++   L+L
Sbjct:   261 LFASLGLLWVSTWSSGVTNNPQDSPFITRSELRLIQAGKPVQPSTISPKPNPSLR--LLL 318

Query:   116 SKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGG 175
             SK P WA+I ++  +NWG F+LL+WMP Y+  V + NL ++  F  LPW TMA S    G
Sbjct:   319 SKLPTWAIIFANVTNNWGYFVLLSWMPVYFQTVFNVNLKQAAWFSALPWATMAISGYYAG 378

Query:   176 WIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSPAMAVLCMACSQGTDAFSQS 235
               +D L+  G SVT+VRKIMQSIGF+GP   L  L+   SP+ A + M  +    +FSQ+
Sbjct:   379 AASDFLIRTGHSVTSVRKIMQSIGFMGPGLSLLCLNFAKSPSCAAVFMTIALSLSSFSQA 438

Query:   236 GLYSNHQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQH-GSWDDVFKVSVGLYLVG 294
             G   N QDIAP+Y+G L G+SN AG LA +  T  TGY +Q  GS+     V+  LY   
Sbjct:   439 GFLLNMQDIAPQYAGFLHGISNCAGTLAAIVSTIGTGYFVQWLGSFQAFLTVTAFLYFAT 498

Query:   295 TAVWNLFSTGEKV 307
             T  W LF+TGE+V
Sbjct:   499 TVFWLLFATGERV 511

GO:0005351 "sugar:hydrogen symporter activity" evidence=ISS

GO:0008514 "organic anion transmembrane transporter activity" evidence=ISS

GO:0015144 "carbohydrate transmembrane transporter activity" evidence=ISS

GO:0016020 "membrane" evidence=ISS

GO:0016021 "integral to membrane" evidence=IEA

GO:0055085 "transmembrane transport" evidence=IEA

GO:0005315 "inorganic phosphate transmembrane transporter activity" evidence=IDA

GO:0009536 "plastid" evidence=IDA

GO:0015706 "nitrate transport" evidence=RCA

TAIR|locus:2149199 PHT4;5 "phosphate transporter 4;5" [Arabidopsis thaliana (taxid:3702)]

 Score = 593 (213.8 bits), Expect = 1.1e-57, P = 1.1e-57
 Identities = 123/312 (39%), Positives = 180/312 (57%)

Query:     1 MGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVF 60
             +GIGEGV+  A  +++++ +PV ERSR++  V+ G+ LGSV GL  +P +I  F W SVF
Sbjct:   199 VGIGEGVSPSAATDLIARTIPVKERSRAVGFVFGGLSLGSVMGLLLAPPIIETFNWESVF 258

Query:    61 YSFGSLGTVWFT--VWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKP 118
             Y FG LG  WF    +L++   S  +  ++  + K    +       +K IPW      P
Sbjct:   259 YLFGLLGVGWFVGFQFLNEEEVS-YKGNEISTSHKSENATKEELGSSLKEIPWKSFFQSP 317

Query:   119 PVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIA 178
              VWA+I +HFC +WG +  L+W+PTY+++ L  NLTE+    +LP L      +L    A
Sbjct:   318 AVWAMIYTHFCGSWGHYTCLSWLPTYFSEALSLNLTEAAWVSILPPLASIVVTSLASQFA 377

Query:   179 DTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVD---SPAMAVLCMACSQGTDAFSQS 235
             D L++ G+  TTVRKI Q+I F+ PA  +T LS VD    P   V  +       +F+ S
Sbjct:   378 DYLITNGVDTTTVRKICQTIAFVAPAICMT-LSSVDIGLPPWEIVGILTAGLALSSFALS 436

Query:   236 GLYSNHQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQHG-SWD-DVFKVSVGLYLV 293
             GLY  HQDI+P Y+ +LLG++NT G + G+ G A TG++L    SW   +F  S+  YL 
Sbjct:   437 GLYCTHQDISPEYASILLGITNTVGAVPGIVGVALTGFLLDSTHSWTMSLFVPSIFFYLT 496

Query:   294 GTAVWNLFSTGE 305
             GT VW  F++ E
Sbjct:   497 GTVVWLAFASSE 508

GO:0009507 "chloroplast" evidence=ISM

GO:0016021 "integral to membrane" evidence=IEA

GO:0055085 "transmembrane transport" evidence=IEA

GO:0016020 "membrane" evidence=ISS

GO:0005315 "inorganic phosphate transmembrane transporter activity" evidence=IDA

GO:0009536 "plastid" evidence=IDA

GO:0015706 "nitrate transport" evidence=RCA

UNIPROTKB|E1B7R3 SLC17A5 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 547 (197.6 bits), Expect = 8.0e-53, P = 8.0e-53
 Identities = 110/310 (35%), Positives = 167/310 (53%)

Query:     2 GIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFY 61
             G+GEGV  PAM+ + S W P  ERS+ L++ Y+G  LG+V  L  S  + +   W  VFY
Sbjct:   172 GLGEGVTFPAMHAMWSSWAPPLERSKLLSISYAGAQLGTVVSLPLSGVICYYMNWTYVFY 231

Query:    62 SFGSLGTVWFTVWLSKAHSSPAEDPQLRPAEKKLIVSSCASK-EPVKTIPWGLILSKPPV 120
              FG +G +WF +W+     +P     + P EK+ I+SS  ++    K++PW  +L   P+
Sbjct:   232 FFGLVGIIWFILWICLVSDTPETHKTITPYEKEYILSSLKNQLSSQKSVPWIPMLKSLPL 291

Query:   121 WALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADT 180
             WA++V+HF +NW  + LLT +PTY  +VL FN+ E+G    +P+L       L G  AD 
Sbjct:   292 WAIVVAHFSYNWTFYTLLTLLPTYMKEVLRFNIQENGFLSAVPYLGCWLCMILSGQAADN 351

Query:   181 LVSK-GLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSP-AMAVLCMACSQGTDAFSQSGLY 238
             L ++   S   VR++   IG +GPA FL     +    ++AV  +  S     F  SG  
Sbjct:   352 LRARWNFSTLWVRRVFSLIGMIGPAIFLVAAGFIGCDYSLAVAFLTISTTLGGFCSSGFS 411

Query:   239 SNHQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQH---GSWDDVFKVSVGLYLVGT 295
              NH DIAP Y+G+LLG++NT   + G+ G      +      G W  VF ++  + + G 
Sbjct:   412 INHLDIAPSYAGILLGITNTFATIPGMIGPIIARSLTPENTIGEWQTVFCIAAAINVFGA 471

Query:   296 AVWNLFSTGE 305
               + LF+ GE
Sbjct:   472 IFFTLFAKGE 481

GO:0016023 "cytoplasmic membrane-bounded vesicle" evidence=IEA

GO:0015739 "sialic acid transport" evidence=IEA

GO:0015136 "sialic acid transmembrane transporter activity" evidence=IEA

GO:0005886 "plasma membrane" evidence=IEA

GO:0005765 "lysosomal membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

UNIPROTKB|Q9NRA2 SLC17A5 "Sialin" [Homo sapiens (taxid:9606)]

 Score = 547 (197.6 bits), Expect = 8.0e-53, P = 8.0e-53
 Identities = 112/310 (36%), Positives = 168/310 (54%)

Query:     2 GIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFY 61
             G+GEGV  PAM+ + S W P  ERS+ L++ Y+G  LG+V  L  S  + +   W  VFY
Sbjct:   172 GLGEGVTFPAMHAMWSSWAPPLERSKLLSISYAGAQLGTVISLPLSGIICYYMNWTYVFY 231

Query:    62 SFGSLGTVWFTVWLSKAHSSPAEDPQLRPAEKKLIVSSCASK-EPVKTIPWGLILSKPPV 120
              FG++G  WF +W+     +P +  ++   EK+ I+SS  ++    K++PW  IL   P+
Sbjct:   232 FFGTIGIFWFLLWIWLVSDTPQKHKRISHYEKEYILSSLRNQLSSQKSVPWVPILKSLPL 291

Query:   121 WALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADT 180
             WA++V+HF +NW  + LLT +PTY  ++L FN+ E+G    LP+L       L G  AD 
Sbjct:   292 WAIVVAHFSYNWTFYTLLTLLPTYMKEILRFNVQENGFLSSLPYLGSWLCMILSGQAADN 351

Query:   181 LVSK-GLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSP-AMAVLCMACSQGTDAFSQSGLY 238
             L +K   S   VR+I   IG +GPA FL     +    ++AV  +  S     F  SG  
Sbjct:   352 LRAKWNFSTLCVRRIFSLIGMIGPAVFLVAAGFIGCDYSLAVAFLTISTTLGGFCSSGFS 411

Query:   239 SNHQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQH---GSWDDVFKVSVGLYLVGT 295
              NH DIAP Y+G+LLG++NT   + G+ G      +      G W  VF ++  + + G 
Sbjct:   412 INHLDIAPSYAGILLGITNTFATIPGMVGPVIAKSLTPDNTVGEWQTVFYIAAAINVFGA 471

Query:   296 AVWNLFSTGE 305
               + LF+ GE
Sbjct:   472 IFFTLFAKGE 481

GO:0006865 "amino acid transport" evidence=IEA

GO:0030054 "cell junction" evidence=IEA

GO:0030672 "synaptic vesicle membrane" evidence=IEA

GO:0016020 "membrane" evidence=TAS

GO:0005351 "sugar:hydrogen symporter activity" evidence=TAS

GO:0005765 "lysosomal membrane" evidence=IDA;TAS

GO:0015136 "sialic acid transmembrane transporter activity" evidence=IDA

GO:0015739 "sialic acid transport" evidence=IDA

GO:0005887 "integral to plasma membrane" evidence=TAS

GO:0006820 "anion transport" evidence=TAS

GO:0006811 "ion transport" evidence=TAS

GO:0055085 "transmembrane transport" evidence=TAS

MGI|MGI:1924105 Slc17a5 "solute carrier family 17 (anion/sugar transporter), member 5" [Mus musculus (taxid:10090)]

 Score = 541 (195.5 bits), Expect = 3.5e-52, P = 3.5e-52
 Identities = 112/310 (36%), Positives = 165/310 (53%)

Query:     2 GIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFY 61
             G+GEGV  PAM+ + S W P  ERS+ L + Y+G  LG+V  L  S  + +   W  VFY
Sbjct:   172 GLGEGVTFPAMHAMWSSWAPPLERSKLLTISYAGAQLGTVISLPLSGIICYYMNWTYVFY 231

Query:    62 SFGSLGTVWFTVWLSKAHSSPAEDPQLRPAEKKLIVSSCASK-EPVKTIPWGLILSKPPV 120
              FG +G VWF +W+     +P     +   EK+ IVSS  ++    K +PWG IL   P+
Sbjct:   232 LFGIVGIVWFILWMWIVSDTPETHKTISHYEKEYIVSSLKNQLSSQKVVPWGSILKSLPL 291

Query:   121 WALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADT 180
             WA++V+HF +NW  + LLT +PTY  ++L FN+ E+G    LP+        L G  AD 
Sbjct:   292 WAIVVAHFSYNWSFYTLLTLLPTYMKEILRFNVQENGFLSALPYFGCWLCMILCGQAADY 351

Query:   181 L-VSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSP-AMAVLCMACSQGTDAFSQSGLY 238
             L V    S  +VR+I   +G +GPA FL     +    ++AV  +  S     F+ SG  
Sbjct:   352 LRVKWNFSTISVRRIFSLVGMVGPAVFLVAAGFIGCDYSLAVAFLTISTTLGGFASSGFS 411

Query:   239 SNHQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGS---WDDVFKVSVGLYLVGT 295
              NH DIAP Y+G+LLG++NT   + G+ G      +    +   W  VF ++  + + G 
Sbjct:   412 INHLDIAPSYAGILLGITNTFATIPGMTGPIIAKSLTPDNTIREWQTVFCIAAAINVFGA 471

Query:   296 AVWNLFSTGE 305
               + LF+ GE
Sbjct:   472 IFFTLFAKGE 481

GO:0005764 "lysosome" evidence=ISO

GO:0005765 "lysosomal membrane" evidence=ISO

GO:0005886 "plasma membrane" evidence=IDA

GO:0006810 "transport" evidence=IEA

GO:0006865 "amino acid transport" evidence=IEA

GO:0015136 "sialic acid transmembrane transporter activity" evidence=ISO

GO:0015293 "symporter activity" evidence=IEA

GO:0015739 "sialic acid transport" evidence=ISO

GO:0016020 "membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0016023 "cytoplasmic membrane-bounded vesicle" evidence=IDA

GO:0030054 "cell junction" evidence=IEA

GO:0031410 "cytoplasmic vesicle" evidence=IEA

GO:0045202 "synapse" evidence=IEA

GO:0055085 "transmembrane transport" evidence=ISO

UNIPROTKB|E2R8R4 SLC17A5 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 537 (194.1 bits), Expect = 9.2e-52, P = 9.2e-52
 Identities = 109/310 (35%), Positives = 167/310 (53%)

Query:     2 GIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFY 61
             G+GEGV  PAM+ + S W P  ERS+ L++ Y+G  LG+V  L  S  +     W  VFY
Sbjct:   172 GLGEGVTFPAMHAMWSSWAPPLERSKLLSISYAGAQLGTVISLPLSGIICFYMNWTYVFY 231

Query:    62 SFGSLGTVWFTVWLSKAHSSPAEDPQLRPAEKKLIVSSCASK-EPVKTIPWGLILSKPPV 120
              FG +G +WF +W+     +P     +   EK+ I+SS  ++    K++PW  +L   P+
Sbjct:   232 LFGIVGIIWFILWIFLVSETPETHKTISRQEKEYILSSLKNQLSSQKSVPWIPMLKSLPL 291

Query:   121 WALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADT 180
             WA++V+HF +NW  + LLT +PTY  ++L FN+ E+GL   LP+        L G  AD 
Sbjct:   292 WAIVVAHFSYNWTFYTLLTLLPTYMKEILRFNVQENGLLSALPYFGCWLCMILSGQAADN 351

Query:   181 LVSK-GLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSP-AMAVLCMACSQGTDAFSQSGLY 238
             L +K   S   VR++   IG +GPA FL     +    ++AV+ +  S     F  SG  
Sbjct:   352 LRAKWNFSTICVRRVFSLIGMIGPAVFLVAAGFIGCDYSLAVVFLTISTTLGGFCSSGFS 411

Query:   239 SNHQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGS---WDDVFKVSVGLYLVGT 295
              NH DIAP Y+G+LLG++NT   + G+ G      +    +   W  VF ++  + + G 
Sbjct:   412 INHLDIAPSYAGILLGITNTFATIPGMVGPVIAKSLTPDNTIREWQTVFYIAAAINVFGA 471

Query:   296 AVWNLFSTGE 305
               ++LF+ GE
Sbjct:   472 IFFSLFAKGE 481

GO:0016023 "cytoplasmic membrane-bounded vesicle" evidence=IEA

GO:0015739 "sialic acid transport" evidence=IEA

GO:0015136 "sialic acid transmembrane transporter activity" evidence=IEA

GO:0005886 "plasma membrane" evidence=IEA

GO:0005765 "lysosomal membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

UNIPROTKB|Q5ZL94 SLC17A5 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 534 (193.0 bits), Expect = 1.9e-51, P = 1.9e-51
 Identities = 111/310 (35%), Positives = 164/310 (52%)

Query:     2 GIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFY 61
             G+GEGV  PAM+++ S W P  ERS+ L++ Y+G  LG+V  L  S  + +   W  VFY
Sbjct:   161 GLGEGVTFPAMHSMWSSWAPPLERSKLLSISYAGAQLGTVVSLPLSGLICYYMNWVYVFY 220

Query:    62 SFGSLGTVWFTVWLSKAHSSPAEDPQLRPAEKKLIVSSCASK-EPVKTIPWGLILSKPPV 120
              FG+LG +WF  W+      P     +   E++ I+SS   +    K++PW  IL   P+
Sbjct:   221 IFGALGVLWFFFWMWLVSDKPETHKSISRIEREYILSSLKDQLSTQKSVPWRPILESLPL 280

Query:   121 WALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADT 180
             WA++V+HF +NW  + LLT +PTY  ++L F+  E+G    LP+        L G IAD 
Sbjct:   281 WAIVVAHFSYNWTFYTLLTLLPTYMKEILRFDAQENGFLSALPYFGCWLCIILSGQIADH 340

Query:   181 LVSK-GLSVTTVRKIMQSIGFLGPAFFLTQLSHVD-SPAMAVLCMACSQGTDAFSQSGLY 238
             L  K   S   VRK    IG +GPA FL     +  +  +AV  +  S     F  SG  
Sbjct:   341 LREKQNFSTVCVRKCFTLIGMIGPAVFLVAAGFIGCNYELAVAFVTISTTLGGFCTSGYS 400

Query:   239 SNHQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQH---GSWDDVFKVSVGLYLVGT 295
              NH DIAP Y+G+LLG++N+   + G+ G      +  +   G W  VF ++  + L G 
Sbjct:   401 INHLDIAPSYAGILLGITNSFATIPGMVGPVIAKNLTHNNTVGEWQTVFYIAASINLFGA 460

Query:   296 AVWNLFSTGE 305
               + LF++GE
Sbjct:   461 IFFALFASGE 470

GO:0016021 "integral to membrane" evidence=IEA

GO:0005765 "lysosomal membrane" evidence=IEA

GO:0005886 "plasma membrane" evidence=IEA

GO:0015136 "sialic acid transmembrane transporter activity" evidence=IEA

GO:0015739 "sialic acid transport" evidence=IEA

GO:0016023 "cytoplasmic membrane-bounded vesicle" evidence=IEA

ZFIN|ZDB-GENE-060929-1158 slc17a5 "solute carrier family 17 (anion/sugar transporter), member 5" [Danio rerio (taxid:7955)]

 Score = 534 (193.0 bits), Expect = 1.9e-51, P = 1.9e-51
 Identities = 113/310 (36%), Positives = 168/310 (54%)

Query:     2 GIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFY 61
             GIGEGV  PAM+ + + W P  ERSR L + Y+G  LG+V  L  S  +     W  VFY
Sbjct:   167 GIGEGVTYPAMHAMWASWAPPLERSRLLTISYTGAQLGTVVALPLSGQICFYLDWTYVFY 226

Query:    62 SFGSLGTVWFTVWLSKAHSSPAEDPQLRPAEKKLIVSSCASK-EPVKT-IPWGLILSKPP 119
              FG++G +WF +W+    +SP+   ++  AEK  I+SS  ++  P +  IPW  I    P
Sbjct:   227 IFGAVGLLWFFLWICFVSNSPSSHKRITEAEKTYIMSSLKNELSPTQDYIPWTSIFKSMP 286

Query:   120 VWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIAD 179
             +WA++V+HF +NW  + LLT +PTY N VL F++ ++G+   LP+L     A LGG +AD
Sbjct:   287 LWAIVVAHFSYNWTFYTLLTLLPTYMNDVLGFSIQQNGMLSALPYLGCWLLALLGGQLAD 346

Query:   180 TLVSKGLSVTT-VRKIMQSIGFLGPAFFLTQLSHVD-SPAMAVLCMACSQGTDAFSQSGL 237
              L  + L  T  VRK    +G  GPA FL    +   +  +AV  +  S      S SG 
Sbjct:   347 LLRERFLFRTVIVRKAFTVVGMAGPAVFLVAAGYTGCNYILAVAFLTISSSLGGISASGF 406

Query:   238 YSNHQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGS---WDDVFKVSVGLYLVG 294
               NH DIAP Y+G+LLG++N+   + G+ G      + +  +   W  VF +S  + + G
Sbjct:   407 NINHLDIAPSYAGILLGITNSFATIPGMVGPVIARSLTKSNTIPEWQIVFYISAAINIFG 466

Query:   295 TAVWNLFSTG 304
                + +F  G
Sbjct:   467 AVFFTIFGKG 476

GO:0016021 "integral to membrane" evidence=IEA

GO:0055085 "transmembrane transport" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q9SDI4	PHT41_ORYSJ	No assigned EC number	0.8899	1.0	0.5841	yes	no
O82390	ANTR1_ARATH	No assigned EC number	0.8608	1.0	0.6035	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input:
	gw1.IX.3850.1	hypothetical protein (415 aa)
		(Populus trichocarpa)
Predicted Functional Partners:
	fgenesh4_pm.C_LG_III000318	hypothetical protein (522 aa)			•						0.400

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	309
TIGR00894	465	TIGR00894, 2A0114euk, Na(+)-dependent inorganic ph	1e-50
TIGR00893	399	TIGR00893, 2A0114, D-galactonate transporter	2e-28
pfam07690	346	pfam07690, MFS_1, Major Facilitator Superfamily	2e-25
cd06174	352	cd06174, MFS, The Major Facilitator Superfamily (M	1e-20
TIGR00895	398	TIGR00895, 2A0115, benzoate transport	1e-10
TIGR00881	379	TIGR00881, 2A0104, phosphoglycerate transporter fa	2e-08
COG2814	394	COG2814, AraJ, Arabinose efflux permease [Carbohyd	8e-07
COG2223	417	COG2223, NarK, Nitrate/nitrite transporter [Inorga	1e-05
COG2271	448	COG2271, UhpC, Sugar phosphate permease [Carbohydr	1e-05
pfam07690	346	pfam07690, MFS_1, Major Facilitator Superfamily	2e-04

>gnl|CDD|129972 TIGR00894, 2A0114euk, Na(+)-dependent inorganic phosphate cotransporter

 Score =  173 bits (441), Expect = 1e-50
 Identities = 98/312 (31%), Positives = 150/312 (48%), Gaps = 8/312 (2%)

Query: 2   GIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLI-HRFGWPSVF 60
           G+ +G   PA + I+ KW P  ERSR L +  SG  LG+   L  S +L     GWP +F
Sbjct: 142 GLAQGSVSPATHKIIVKWAPPKERSRLLGMSTSGFQLGTFIFLPISGWLCESWGGWPMIF 201

Query: 61  YSFGSLGTVWFTVWLSKAHSSPAEDPQLRPAEKKLIVSSC-ASKEPV-KTIPWGLILSKP 118
           Y FG +G  W  +W       P+  P +   EKK I SS    K    +++P   I    
Sbjct: 202 YVFGIVGCAWSLLWFVFPADDPSIHPCISKFEKKYINSSLQGQKGSTRQSLPIKAIPKSL 261

Query: 119 PVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIA 178
           PVWA+  + F H W   IL T++PT+ + VL  +  E+GL   LP+L     +   G++A
Sbjct: 262 PVWAIWFAIFGHFWLYTILPTYLPTFISWVLRVSGKENGLLSSLPYLFAWLCSIFAGYLA 321

Query: 179 DTLVSKG-LSVTTVRKIMQSIGFLGPAFFLTQLSHVDSPAMAVLCMAC-SQGTDAFSQSG 236
           D L S   LS+T  RKI   IG LGP  F   L ++ +     + +   +    +   +G
Sbjct: 322 DFLKSSKTLSLTAARKIFNGIGGLGPGIFAYALPYLSAAFYLTIIILTLANAVSSGPLAG 381

Query: 237 LYSNHQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGS---WDDVFKVSVGLYLV 293
           +  N  D+APR+ G + G++   G + G+  +   G IL   S   W  VF +   + ++
Sbjct: 382 VLINSLDLAPRFLGFIKGITGLPGFIGGLIASTLAGNILSQDSKNVWLIVFLIMAFVNIL 441

Query: 294 GTAVWNLFSTGE 305
               + +F + E
Sbjct: 442 CVIFYLIFGSAE 453

[Transport and binding proteins, Anions]. Length = 465

>gnl|CDD|233174 TIGR00893, 2A0114, D-galactonate transporter

 Score =  112 bits (283), Expect = 2e-28
 Identities = 78/302 (25%), Positives = 126/302 (41%), Gaps = 10/302 (3%)

Query: 2   GIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFY 61
           G  E    P +  I++ W P +ER+ ++++  S   LG + G     +++  F W   F 
Sbjct: 93  GAAEAPFFPGIILIVASWFPASERATAVSIFNSAQGLGGIIGGPLVGWILIHFSWQWAFI 152

Query: 62  SFGSLGTVWFTVWLSKAHSSPAEDPQLRPAEKKLIV----SSCASKEPVKTIPWGL--IL 115
             G LG +W  +WL      P +   L   EK ++V    +    K P     + +  +L
Sbjct: 153 IEGVLGIIWGVLWLKFIPDPPQKAKWLTEEEKYIVVGGLLAEQQGKGPSTPKKYQIKELL 212

Query: 116 SKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGG 175
               VW L +  F  N G    LTW PTY  Q    ++ E+G    LP +       LGG
Sbjct: 213 KDRRVWGLALGQFLVNIGLGFFLTWFPTYLVQERGLSILEAGFMASLPGIVGFIGMILGG 272

Query: 176 WIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSPAMAVLCMACSQGTDAFSQS 235
            ++D L+ +G S+    +    I  L  +  +   ++V+ P  A+  +A          +
Sbjct: 273 RLSDLLLRRGKSL-VFARKTAIIAGLVLSLLMFATNYVNIPYAALALVALGFFGLGAG-A 330

Query: 236 GLYSNHQDIAPRYS-GVLLGLSNTAGVLAGVFGTAATGYIL-QHGSWDDVFKVSVGLYLV 293
             ++   D AP    G+  GL N+ G L G+ G    G I    GS+     V   L L+
Sbjct: 331 IGWALISDNAPGNIAGLTGGLINSLGNLGGIVGPIVIGAIAATTGSFAGALMVVAALALI 390

Query: 294 GT 295
           G 
Sbjct: 391 GA 392

[Transport and binding proteins, Carbohydrates, organic alcohols, and acids]. Length = 399

>gnl|CDD|219516 pfam07690, MFS_1, Major Facilitator Superfamily

 Score =  103 bits (259), Expect = 2e-25
 Identities = 70/269 (26%), Positives = 109/269 (40%), Gaps = 18/269 (6%)

Query: 1   MGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVF 60
            G+G G   PA   +++ W P  ER R+L L+ +G  LG+  G      L   FGW + F
Sbjct: 95  QGLGGGALFPAAAALIADWFPPEERGRALGLLSAGFGLGAALGPLLGGLLASLFGWRAAF 154

Query: 61  YSFGSLGTVWFTVWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPV 120
                L  +   +        P E  + +PAE+           P   +P   +L + PV
Sbjct: 155 LILAILALLAAVLAALLLPRPPPESKRPKPAEEA----------PAPLVPAWKLLLRDPV 204

Query: 121 WALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADT 180
             L+++     +  F LLT++P  Y +VL  +   +GL   L  L  A    L G ++D 
Sbjct: 205 LWLLLALLLFGFAFFALLTYLPL-YQEVLGLSALLAGLLLGLAGLLGAIGRLLLGRLSDR 263

Query: 181 LVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSPAMAVLCMACSQGTDAFSQSGLYSN 240
           L  +       R ++  +  +  A  L  LS  +S    ++ +             L + 
Sbjct: 264 LGRR------RRLLLALLLLILAALGLALLSLTESSLWLLVALLLLGFGAGLVFPALNAL 317

Query: 241 HQDIAP-RYSGVLLGLSNTAGVLAGVFGT 268
             D+AP    G   GL NTAG L G  G 
Sbjct: 318 VSDLAPKEERGTASGLYNTAGSLGGALGP 346

Length = 346

>gnl|CDD|119392 cd06174, MFS, The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters

 Score = 90.5 bits (225), Expect = 1e-20
 Identities = 74/302 (24%), Positives = 117/302 (38%), Gaps = 48/302 (15%)

Query: 1   MGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVF 60
           +G+G G   PA   ++++W P  ER R+L L  +G  LG++ G      L    GW  +F
Sbjct: 97  LGLGGGALYPAAAALIAEWFPPKERGRALGLFSAGFGLGALLGPLLGGLLAESLGWRWLF 156

Query: 61  YSFGSLGTVWFTVWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPV 120
                LG +   + L                                            +
Sbjct: 157 LILAILGLLLALLLL---------------------------------------FLLRLL 177

Query: 121 WALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADT 180
             L ++ F  ++G + LLT++P Y  +VL  +  E+GL   L  L     A LGG ++D 
Sbjct: 178 LLLALAFFLLSFGYYGLLTYLPLYLQEVLGLSAAEAGLLLSLFGLGGILGALLGGLLSDR 237

Query: 181 LVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSPAMAVLCMACSQGTDAFSQSGLYSN 240
           L          R+++  IG L  A  L  L+   S A+ ++ +        F+   L + 
Sbjct: 238 LGR--------RRLLLLIGLLLAALGLLLLALAPSLALLLVALLLLGFGLGFAFPALLTL 289

Query: 241 HQDIAP-RYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSWDDVFKVSVGLYLVGTAVWN 299
             ++AP    G   GL NT G L G  G    G +L  G +  VF +   L L+   +  
Sbjct: 290 ASELAPPEARGTASGLFNTFGSLGGALGPLLAGLLLDTGGYGGVFLILAALALLAALLLL 349

Query: 300 LF 301
           L 
Sbjct: 350 LL 351

MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3-phosphate transporter), LacY (lactose permease), and EmrD (multidrug transporter), MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement. Bacterial members function primarily for nutrient uptake, and as drug-efflux pumps to confer antibiotic resistance. Some MFS proteins have medical significance in humans such as the glucose transporter Glut4, which is impaired in type II diabetes, and glucose-6-phosphate transporter (G6PT), which causes glycogen storage disease when mutated. Length = 352

>gnl|CDD|233175 TIGR00895, 2A0115, benzoate transport

 Score = 61.2 bits (149), Expect = 1e-10
 Identities = 66/296 (22%), Positives = 117/296 (39%), Gaps = 35/296 (11%)

Query: 2   GIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFY 61
           G+G G  MP +N ++S++ P   R  ++ L++ G  +G+  G   + +LI  FGW S+FY
Sbjct: 116 GLGLGGLMPNLNALVSEYAPKRFRGTAVGLMFCGYPIGAAVGGFLAGWLIPVFGWRSLFY 175

Query: 62  SFGSLGTVWFTVWLSKAHSSPAEDPQLRPAEKKL-IVSSCA---------------SKEP 105
             G +  +   + L +      +    +  E    IV++ A               + + 
Sbjct: 176 -VGGIAPLLLLLLLMRFLPESIDFLVSKRPETVRRIVNAIAPQMQAEAQSALPEQKATQG 234

Query: 106 VKTIPWGLILSKPPVWA---LIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVL 162
            K   +  +           L + +F    G + L  W+P    + L F+L+ +     L
Sbjct: 235 TKRSVFKALFQGKTARITVLLWLLYFMLLVGVYFLTNWLPKLMVE-LGFSLSLAATGGAL 293

Query: 163 PWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSPAMAVLC 222
                   + + GW+AD L           ++   +  LG  F +   S + SP + +L 
Sbjct: 294 FNFGGVIGSIIFGWLADRL---------GPRVTALLLLLGAVFAVLVGSTLFSPTLLLLL 344

Query: 223 MACSQGTDAFSQSGLYSNHQDIAP---RYSGVLLGLSNTAGVLAGVFGTAATGYIL 275
            A +       QSGLY+      P   R +GV   +    G L  + G    GY+L
Sbjct: 345 GAIAGFFVNGGQSGLYALMALFYPTAIRATGVGWAIG--IGRLGAIIGPILAGYLL 398

[Transport and binding proteins, Carbohydrates, organic alcohols, and acids]. Length = 398

>gnl|CDD|233167 TIGR00881, 2A0104, phosphoglycerate transporter family protein

 Score = 54.7 bits (132), Expect = 2e-08
 Identities = 53/293 (18%), Positives = 100/293 (34%), Gaps = 17/293 (5%)

Query: 2   GIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGS--VTGLAFSPFLIHRFGWPSV 59
           GI +G+  P     ++KW   +ER   ++       +G   +  L         + W  V
Sbjct: 94  GIFQGMGWPPCGRTVTKWFSRSERGTWVSFWNCSHNVGGGLLPPLVLFGIAEL-YSWHWV 152

Query: 60  FYSFGSLGTVWFTVWLSKAHSSPAEDPQLRPAEKKLI--VSSCASKEPVKTIPWGL---- 113
           F   G +  +   +       SP +   L PAE+         A K+  +     +    
Sbjct: 153 FIVPGIIAIIVSLICFLLLRDSP-QSCGLPPAEEMPNEEPDGDAEKKEEELTKKQIFLQY 211

Query: 114 ILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANL 173
           +L    +W + + +         +L W P Y  Q   F+  ++     L  L       L
Sbjct: 212 VLLNKVLWYISLGYVFVYVVRTGILDWSPLYLTQEKGFSKEKASWAFTLYELGGLVGTLL 271

Query: 174 GGWIADTLV-SKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSPAMAVLCMACSQGTDAF 232
            GW++D L   +   +      +  +  L   ++L   +   +P M ++C+         
Sbjct: 272 AGWLSDKLFNGRRGPLAVFFMALIIVSLLV--YWLNPAA---NPLMDLICLFALGFLVYG 326

Query: 233 SQSGLYSNHQDIAP-RYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSWDDVF 284
            Q  +     ++AP + +G   G       L G+      GY+     W   F
Sbjct: 327 PQMLIGVIASELAPKKAAGTAAGFVGFFAYLGGILAGLPLGYLADGFGWAGAF 379

[Transport and binding proteins, Carbohydrates, organic alcohols, and acids]. Length = 379

>gnl|CDD|225371 COG2814, AraJ, Arabinose efflux permease [Carbohydrate transport and metabolism]

 Score = 49.5 bits (119), Expect = 8e-07
 Identities = 62/302 (20%), Positives = 108/302 (35%), Gaps = 27/302 (8%)

Query: 1   MGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVF 60
            G+  GV       + ++ VP  +R R+LALV++G+ L +V G+    FL   FGW + F
Sbjct: 111 AGLAHGVFWSIAAALAARLVPPGKRGRALALVFTGLTLATVLGVPLGTFLGQLFGWRATF 170

Query: 61  YSFGSLGTVWFTVWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPV 120
            +   L  +     L      P  +           +                +L +P V
Sbjct: 171 LAIAVLALL---ALLLLWKLLPPSEISGSLPGPLRTLLR--------------LLRRPGV 213

Query: 121 WALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADT 180
              +++ F    G F L T++  +   V  F+++   L  +   +       LGG +AD 
Sbjct: 214 LLGLLATFLFMTGHFALYTYIRPFLESVAGFSVSAVSLVLLAFGIAGFIGNLLGGRLADR 273

Query: 181 LVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSPAMAVLCMACSQGTDAFSQSGLYSN 240
              + L           +        LT      SPA+A+  +       + +  GL + 
Sbjct: 274 GPRRALIAAL-------LLLALALLALTFTGA--SPALALALLFLWGFAFSPALQGLQTR 324

Query: 241 HQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSWDDVFKVSVGLYLVGTAVWNL 300
              +AP  + +   L+  A  L    G A  G +L    +     V     L+   +  L
Sbjct: 325 LARLAPDAADLAGSLNVAAFNLGIALGAALGGLVLDALGYAATGWVG-AALLLLALLLAL 383

Query: 301 FS 302
            S
Sbjct: 384 LS 385

Length = 394

>gnl|CDD|225133 COG2223, NarK, Nitrate/nitrite transporter [Inorganic ion transport and metabolism]

 Score = 46.1 bits (110), Expect = 1e-05
 Identities = 66/297 (22%), Positives = 110/297 (37%), Gaps = 25/297 (8%)

Query: 2   GIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFY 61
           G+        M N  S + P  ++  +L +  +G    +V  L  +P +   FG+ +   
Sbjct: 116 GLAGASFAVGMPNA-SFFFPKEKQGLALGIAGAGNLGVAVAQL-VAPLVAVAFGFLAWRN 173

Query: 62  SFGSLGTVWFTVWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVW 121
             G    V   +    A     + P+ R            S +P        + S    W
Sbjct: 174 VAGIYV-VALAIAAVLAWLGMNDVPEHRA-----------SVKPQLPAQLKAVFSNKDTW 221

Query: 122 ALIVSHFCHNWGTFILLT-WMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADT 180
            L + +F   +G F+  + ++P Y       +   +GL   L  L  A +  LGGW++D 
Sbjct: 222 LLSLLYFA-TFGGFVGFSAYLPMYLVTQFGLSPVTAGLIAFLFPLIGALARPLGGWLSDR 280

Query: 181 LVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSPAMAVLCMACSQGTDAFSQSGLYSN 240
           +   G  VT    +  ++     + FLT   H  S  + V           F+  G  S 
Sbjct: 281 I--GGRRVTLAVFVGMALAAALLSLFLTGFGHGGSFVVFVAVFL---ALFVFAGLGNGSV 335

Query: 241 HQ---DIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQH-GSWDDVFKVSVGLYLV 293
            +    I P+ +G + G+    G L G F   A G  L   GS+   F + +  YLV
Sbjct: 336 FKMIPVIFPKETGAVTGIVGAIGGLGGFFLPLAFGVSLDLTGSYTGAFMLLLAFYLV 392

Length = 417

>gnl|CDD|225180 COG2271, UhpC, Sugar phosphate permease [Carbohydrate transport and metabolism]

 Score = 46.1 bits (110), Expect = 1e-05
 Identities = 64/333 (19%), Positives = 104/333 (31%), Gaps = 44/333 (13%)

Query: 2   GIGEGVAMPAMNNILSKWVPVAERSRSLALV-----YSGMYLGSVTGLAFSPFLIHRFGW 56
           G  +G+  P     ++ W    ER    ++        G     V  LAF        GW
Sbjct: 128 GWFQGMGWPPCARTITHWFSRKERGTWWSIWNTSHNIGGALAPLVALLAF---FAFHGGW 184

Query: 57  PSVFYSFGSLGTVWFTVWLSKAHSSPAEDPQLRPAEK---KLIVSSCASKE----PVKTI 109
            + FY  G +  +   + L        +   L P E+     +      KE        I
Sbjct: 185 RAAFYFPGIIAII-VALILLFLLRDRPQSEGLPPIEEYRGDPLEIYEEEKENEGLTAWQI 243

Query: 110 PWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAF 169
               +L    +W L +++       + +  W P Y ++V  F+L ++       W    F
Sbjct: 244 FVKYVLKNKLIWLLALANVFVYVVRYGINDWGPLYLSEVKGFSLVKAN------WAISLF 297

Query: 170 ------SANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLT--QLSHVDSPAMAVL 221
                    L GW++D  + KG      R  M  I  L     L    L+   S  +  +
Sbjct: 298 EVAGLPGTLLAGWLSD-KLFKGR-----RGPMALIFMLLITASLVLYWLAPNGSYLLDAI 351

Query: 222 CMACSQGTDAFSQ---SGLYSNHQDIAPRYS-GVLLGLSNTAGVLAG-VFGTAATGYILQ 276
            +    G   +      GL +   +  P+ + G   G       L G        GYI  
Sbjct: 352 LLFII-GFLIYGPQMLIGLAAA--EFVPKKAAGTATGFVGLFAYLIGAALAGLPLGYIAD 408

Query: 277 HGSWDDVFKVSVGLYLVGTAVWNLFSTGEKVVD 309
              WD  F V     L+   +       E+   
Sbjct: 409 TWGWDGGFIVLSIAALLAILLLLPVWNAEERKI 441

Length = 448

>gnl|CDD|219516 pfam07690, MFS_1, Major Facilitator Superfamily

 Score = 42.0 bits (99), Expect = 2e-04
 Identities = 38/180 (21%), Positives = 58/180 (32%), Gaps = 10/180 (5%)

Query: 123 LIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLV 182
           L ++ F    G  +L   +P Y  + L  + TE GL      L  A +  L G ++D   
Sbjct: 1   LFLAAFLAGLGRSLLGPALPLYLAEDLGISPTEIGLLLTAFSLGYALAQPLAGRLSDRF- 59

Query: 183 SKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSPAMAVLCMACSQGTDAFSQSGLYSNHQ 242
                    R+ +  IG L  A  L  L    S  + ++                 +   
Sbjct: 60  --------GRRRVLLIGLLLFALGLLLLLFASSLWLLLVLRVLQGLGGGALFPAAAALIA 111

Query: 243 DIAPR-YSGVLLGLSNTAGVLAGVFGTAATGYILQHGSWDDVFKVSVGLYLVGTAVWNLF 301
           D  P    G  LGL +    L    G    G +     W   F +   L L+   +  L 
Sbjct: 112 DWFPPEERGRALGLLSAGFGLGAALGPLLGGLLASLFGWRAAFLILAILALLAAVLAALL 171

Length = 346

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	309
KOG2532	466	consensus Permease of the major facilitator superf	100.0
COG2271	448	UhpC Sugar phosphate permease [Carbohydrate transp	100.0
TIGR00894	465	2A0114euk Na(+)-dependent inorganic phosphate cotr	100.0
COG2814	394	AraJ Arabinose efflux permease [Carbohydrate trans	99.97
PRK09556	467	uhpT sugar phosphate antiporter; Reviewed	99.97
TIGR00903	368	2A0129 major facilitator 4 family protein. This fa	99.97
PRK11663	434	regulatory protein UhpC; Provisional	99.97
TIGR00893	399	2A0114 d-galactonate transporter.	99.96
TIGR02332	412	HpaX 4-hydroxyphenylacetate permease. This protein	99.96
PRK03545	390	putative arabinose transporter; Provisional	99.96
PRK10406	432	alpha-ketoglutarate transporter; Provisional	99.95
PRK11273	452	glpT sn-glycerol-3-phosphate transporter; Provisio	99.95
TIGR00712	438	glpT glycerol-3-phosphate transporter. This model	99.95
PRK10642	490	proline/glycine betaine transporter; Provisional	99.94
PLN00028	476	nitrate transmembrane transporter; Provisional	99.94
PRK09952	438	shikimate transporter; Provisional	99.94
PRK09705	393	cynX putative cyanate transporter; Provisional	99.94
TIGR00897	402	2A0118 polyol permease family. This family of prot	99.94
COG2223	417	NarK Nitrate/nitrite transporter [Inorganic ion tr	99.93
PRK14995	495	methyl viologen resistance protein SmvA; Provision	99.93
PRK03699	394	putative transporter; Provisional	99.93
TIGR00899	375	2A0120 sugar efflux transporter. This family of pr	99.93
PRK10213	394	nepI ribonucleoside transporter; Reviewed	99.92
PRK11551	406	putative 3-hydroxyphenylpropionic transporter MhpT	99.92
PRK10091	382	MFS transport protein AraJ; Provisional	99.92
TIGR00890	377	2A0111 Oxalate/Formate Antiporter.	99.92
TIGR00881	379	2A0104 phosphoglycerate transporter family protein	99.92
PRK11010	491	ampG muropeptide transporter; Validated	99.92
PRK15402	406	multidrug efflux system translocase MdfA; Provisio	99.92
PRK15075	434	citrate-proton symporter; Provisional	99.92
PRK15011	393	sugar efflux transporter B; Provisional	99.92
TIGR00710	385	efflux_Bcr_CflA drug resistance transporter, Bcr/C	99.92
KOG2533	495	consensus Permease of the major facilitator superf	99.91
PRK15034	462	nitrate/nitrite transport protein NarU; Provisiona	99.91
TIGR00711	485	efflux_EmrB drug resistance transporter, EmrB/QacA	99.91
TIGR00892	455	2A0113 monocarboxylate transporter 1.	99.91
PRK10504	471	putative transporter; Provisional	99.91
TIGR00900	365	2A0121 H+ Antiporter protein.	99.91
PRK11102	377	bicyclomycin/multidrug efflux system; Provisional	99.91
TIGR00883	394	2A0106 metabolite-proton symporter. This model rep	99.9
PRK10489	417	enterobactin exporter EntS; Provisional	99.9
PRK12307	426	putative sialic acid transporter; Provisional	99.9
PRK05122	399	major facilitator superfamily transporter; Provisi	99.9
PF07690	352	MFS_1: Major Facilitator Superfamily; InterPro: IP	99.9
PRK11195	393	lysophospholipid transporter LplT; Provisional	99.9
TIGR00879	481	SP MFS transporter, sugar porter (SP) family. This	99.89
TIGR00891	405	2A0112 putative sialic acid transporter.	99.89
TIGR00887	502	2A0109 phosphate:H+ symporter. This model represen	99.89
PRK12382	392	putative transporter; Provisional	99.89
TIGR01299	742	synapt_SV2 synaptic vesicle protein SV2. This mode	99.89
PRK15403	413	multidrug efflux system protein MdtM; Provisional	99.89
PRK09874	408	drug efflux system protein MdtG; Provisional	99.88
PRK11043	401	putative transporter; Provisional	99.88
PRK10077	479	xylE D-xylose transporter XylE; Provisional	99.88
COG2807	395	CynX Cyanate permease [Inorganic ion transport and	99.88
PRK11902	402	ampG muropeptide transporter; Reviewed	99.88
TIGR00902	382	2A0127 phenyl proprionate permease family protein.	99.88
TIGR00886	366	2A0108 nitrite extrusion protein (nitrite facilita	99.88
TIGR00895	398	2A0115 benzoate transport.	99.88
TIGR01272	310	gluP glucose/galactose transporter. Disruption of	99.87
PRK10473	392	multidrug efflux system protein MdtL; Provisional	99.87
TIGR00896	355	CynX cyanate transporter. This family of proteins	99.87
PRK11652	394	emrD multidrug resistance protein D; Provisional	99.87
PRK11128	382	putative 3-phenylpropionic acid transporter; Provi	99.87
PRK11646	400	multidrug resistance protein MdtH; Provisional	99.87
PRK03893	496	putative sialic acid transporter; Provisional	99.87
PRK10133	438	L-fucose transporter; Provisional	99.87
PRK03633	381	putative MFS family transporter protein; Provision	99.86
PRK06814	1140	acylglycerophosphoethanolamine acyltransferase; Pr	99.86
cd06174	352	MFS The Major Facilitator Superfamily (MFS) is a l	99.86
TIGR02718	390	sider_RhtX_FptX siderophore transporter, RhtX/FptX	99.85
PRK09528	420	lacY galactoside permease; Reviewed	99.85
TIGR00898	505	2A0119 cation transport protein.	99.84
TIGR00901	356	2A0125 AmpG-related permease.	99.84
TIGR00882	396	2A0105 oligosaccharide:H+ symporter.	99.82
PRK10054	395	putative transporter; Provisional	99.82
TIGR00885	410	fucP L-fucose:H+ symporter permease. This family d	99.82
PRK08633	1146	2-acyl-glycerophospho-ethanolamine acyltransferase	99.81
TIGR00792	437	gph sugar (Glycoside-Pentoside-Hexuronide) transpo	99.8
TIGR00805	633	oat sodium-independent organic anion transporter.	99.79
KOG1330	493	consensus Sugar transporter/spinster transmembrane	99.76
KOG2504	509	consensus Monocarboxylate transporter [Carbohydrat	99.76
PF05977	524	MFS_3: Transmembrane secretion effector; InterPro:	99.75
TIGR00924	475	yjdL_sub1_fam amino acid/peptide transporter (Pept	99.72
PRK10207	489	dipeptide/tripeptide permease B; Provisional	99.72
TIGR00889	418	2A0110 nucleoside transporter. This family of prot	99.67
KOG3764	464	consensus Vesicular amine transporter [Intracellul	99.65
PF11700	477	ATG22: Vacuole effluxer Atg22 like; InterPro: IPR0	99.63
COG0738	422	FucP Fucose permease [Carbohydrate transport and m	99.61
KOG0569	485	consensus Permease of the major facilitator superf	99.61
PF13347	428	MFS_2: MFS/sugar transport protein	99.55
PRK09669	444	putative symporter YagG; Provisional	99.55
KOG0253	528	consensus Synaptic vesicle transporter SV2 (major	99.52
PRK09848	448	glucuronide transporter; Provisional	99.52
PRK10054	395	putative transporter; Provisional	99.52
PRK09584	500	tppB putative tripeptide transporter permease; Rev	99.49
KOG4686	459	consensus Predicted sugar transporter [Carbohydrat	99.48
TIGR00924	475	yjdL_sub1_fam amino acid/peptide transporter (Pept	99.47
PF06609	599	TRI12: Fungal trichothecene efflux pump (TRI12); I	99.47
PF03209	403	PUCC: PUCC protein; InterPro: IPR004896 This prote	99.46
PRK15462	493	dipeptide/tripeptide permease D; Provisional	99.45
PF00083	451	Sugar_tr: Sugar (and other) transporter; InterPro:	99.45
PRK09584	500	tppB putative tripeptide transporter permease; Rev	99.43
PRK11462	460	putative transporter; Provisional	99.41
KOG2563	480	consensus Permease of the major facilitator superf	99.41
PRK10429	473	melibiose:sodium symporter; Provisional	99.39
PRK09528	420	lacY galactoside permease; Reviewed	99.38
PRK11646	400	multidrug resistance protein MdtH; Provisional	99.37
PRK10504	471	putative transporter; Provisional	99.37
PRK11663	434	regulatory protein UhpC; Provisional	99.35
KOG0254	513	consensus Predicted transporter (major facilitator	99.33
TIGR00882	396	2A0105 oligosaccharide:H+ symporter.	99.32
PF07690	352	MFS_1: Major Facilitator Superfamily; InterPro: IP	99.32
PRK10207	489	dipeptide/tripeptide permease B; Provisional	99.31
KOG0255	521	consensus Synaptic vesicle transporter SVOP and re	99.31
PRK09874	408	drug efflux system protein MdtG; Provisional	99.31
TIGR00806	511	rfc RFC reduced folate carrier. Proteins of the RF	99.3
PRK05122	399	major facilitator superfamily transporter; Provisi	99.29
KOG2615	451	consensus Permease of the major facilitator superf	99.28
PRK10489	417	enterobactin exporter EntS; Provisional	99.28
TIGR00899	375	2A0120 sugar efflux transporter. This family of pr	99.28
TIGR01301	477	GPH_sucrose GPH family sucrose/H+ symporter. This	99.27
COG2211	467	MelB Na+/melibiose symporter and related transport	99.27
TIGR00886	366	2A0108 nitrite extrusion protein (nitrite facilita	99.26
PRK11043	401	putative transporter; Provisional	99.26
PLN00028	476	nitrate transmembrane transporter; Provisional	99.26
PF03137	539	OATP: Organic Anion Transporter Polypeptide (OATP)	99.25
TIGR00788	468	fbt folate/biopterin transporter. The only functio	99.25
PRK12382	392	putative transporter; Provisional	99.24
COG2271	448	UhpC Sugar phosphate permease [Carbohydrate transp	99.24
PTZ00207	591	hypothetical protein; Provisional	99.24
PF01306	412	LacY_symp: LacY proton/sugar symporter; InterPro:	99.23
PRK15011	393	sugar efflux transporter B; Provisional	99.23
TIGR02332	412	HpaX 4-hydroxyphenylacetate permease. This protein	99.23
TIGR00903	368	2A0129 major facilitator 4 family protein. This fa	99.22
PRK03699	394	putative transporter; Provisional	99.21
TIGR00900	365	2A0121 H+ Antiporter protein.	99.2
PRK03545	390	putative arabinose transporter; Provisional	99.2
TIGR00710	385	efflux_Bcr_CflA drug resistance transporter, Bcr/C	99.2
KOG3626	735	consensus Organic anion transporter [Secondary met	99.19
PRK11652	394	emrD multidrug resistance protein D; Provisional	99.19
PRK10091	382	MFS transport protein AraJ; Provisional	99.18
TIGR00897	402	2A0118 polyol permease family. This family of prot	99.17
TIGR00712	438	glpT glycerol-3-phosphate transporter. This model	99.17
PF03825	400	Nuc_H_symport: Nucleoside H+ symporter	99.17
PRK15403	413	multidrug efflux system protein MdtM; Provisional	99.16
TIGR00891	405	2A0112 putative sialic acid transporter.	99.16
PRK15462	493	dipeptide/tripeptide permease D; Provisional	99.16
PRK03633	381	putative MFS family transporter protein; Provision	99.15
PRK10213	394	nepI ribonucleoside transporter; Reviewed	99.14
KOG0252	538	consensus Inorganic phosphate transporter [Inorgan	99.14
TIGR00890	377	2A0111 Oxalate/Formate Antiporter.	99.14
PRK10473	392	multidrug efflux system protein MdtL; Provisional	99.14
COG2270	438	Permeases of the major facilitator superfamily [Ge	99.13
TIGR00895	398	2A0115 benzoate transport.	99.13
PRK14995	495	methyl viologen resistance protein SmvA; Provision	99.13
TIGR00711	485	efflux_EmrB drug resistance transporter, EmrB/QacA	99.12
PRK11551	406	putative 3-hydroxyphenylpropionic transporter MhpT	99.11
TIGR00893	399	2A0114 d-galactonate transporter.	99.11
TIGR00881	379	2A0104 phosphoglycerate transporter family protein	99.09
PRK15402	406	multidrug efflux system translocase MdfA; Provisio	99.09
cd06174	352	MFS The Major Facilitator Superfamily (MFS) is a l	99.08
PRK11273	452	glpT sn-glycerol-3-phosphate transporter; Provisio	99.08
PRK03893	496	putative sialic acid transporter; Provisional	99.08
PRK12307	426	putative sialic acid transporter; Provisional	99.08
PRK09705	393	cynX putative cyanate transporter; Provisional	99.06
TIGR00902	382	2A0127 phenyl proprionate permease family protein.	99.06
PRK11195	393	lysophospholipid transporter LplT; Provisional	99.05
PRK11102	377	bicyclomycin/multidrug efflux system; Provisional	99.05
PRK11128	382	putative 3-phenylpropionic acid transporter; Provi	99.04
TIGR00892	455	2A0113 monocarboxylate transporter 1.	99.01
COG2223	417	NarK Nitrate/nitrite transporter [Inorganic ion tr	98.99
COG2814	394	AraJ Arabinose efflux permease [Carbohydrate trans	98.97
PRK15034	462	nitrate/nitrite transport protein NarU; Provisiona	98.97
TIGR00885	410	fucP L-fucose:H+ symporter permease. This family d	98.96
TIGR01299	742	synapt_SV2 synaptic vesicle protein SV2. This mode	98.96
PF05977	524	MFS_3: Transmembrane secretion effector; InterPro:	98.94
TIGR00896	355	CynX cyanate transporter. This family of proteins	98.93
PRK10133	438	L-fucose transporter; Provisional	98.93
PRK06814	1140	acylglycerophosphoethanolamine acyltransferase; Pr	98.91
PRK11902	402	ampG muropeptide transporter; Reviewed	98.88
PRK09556	467	uhpT sugar phosphate antiporter; Reviewed	98.87
PRK11010	491	ampG muropeptide transporter; Validated	98.84
TIGR00894	465	2A0114euk Na(+)-dependent inorganic phosphate cotr	98.83
TIGR00880	141	2_A_01_02 Multidrug resistance protein.	98.82
TIGR00879	481	SP MFS transporter, sugar porter (SP) family. This	98.82
TIGR00792	437	gph sugar (Glycoside-Pentoside-Hexuronide) transpo	98.8
TIGR00806	511	rfc RFC reduced folate carrier. Proteins of the RF	98.79
PRK08633	1146	2-acyl-glycerophospho-ethanolamine acyltransferase	98.77
PF01306	412	LacY_symp: LacY proton/sugar symporter; InterPro:	98.72
PRK10406	432	alpha-ketoglutarate transporter; Provisional	98.7
PRK10077	479	xylE D-xylose transporter XylE; Provisional	98.7
PTZ00207	591	hypothetical protein; Provisional	98.68
PRK10642	490	proline/glycine betaine transporter; Provisional	98.68
PRK09952	438	shikimate transporter; Provisional	98.67
COG3104	498	PTR2 Dipeptide/tripeptide permease [Amino acid tra	98.65
TIGR00889	418	2A0110 nucleoside transporter. This family of prot	98.64
TIGR00901	356	2A0125 AmpG-related permease.	98.64
TIGR02718	390	sider_RhtX_FptX siderophore transporter, RhtX/FptX	98.6
PRK15075	434	citrate-proton symporter; Provisional	98.59
TIGR01301	477	GPH_sucrose GPH family sucrose/H+ symporter. This	98.58
TIGR00805	633	oat sodium-independent organic anion transporter.	98.51
PF06609	599	TRI12: Fungal trichothecene efflux pump (TRI12); I	98.49
TIGR00898	505	2A0119 cation transport protein.	98.47
TIGR00887	502	2A0109 phosphate:H+ symporter. This model represen	98.46
TIGR00880	141	2_A_01_02 Multidrug resistance protein.	98.44
KOG2816	463	consensus Predicted transporter ADD1 (major facili	98.41
PRK09669	444	putative symporter YagG; Provisional	98.4
TIGR00883	394	2A0106 metabolite-proton symporter. This model rep	98.38
PRK10429	473	melibiose:sodium symporter; Provisional	98.36
TIGR00788	468	fbt folate/biopterin transporter. The only functio	98.32
COG3104	498	PTR2 Dipeptide/tripeptide permease [Amino acid tra	98.28
PF13347	428	MFS_2: MFS/sugar transport protein	98.28
KOG2532	466	consensus Permease of the major facilitator superf	98.28
KOG1330	493	consensus Sugar transporter/spinster transmembrane	98.24
KOG3764	464	consensus Vesicular amine transporter [Intracellul	98.23
PRK11462	460	putative transporter; Provisional	98.22
PF12832	77	MFS_1_like: MFS_1 like family	98.15
COG0738	422	FucP Fucose permease [Carbohydrate transport and m	98.11
COG2807	395	CynX Cyanate permease [Inorganic ion transport and	98.1
PF03092	433	BT1: BT1 family; InterPro: IPR004324 Members of th	98.08
PF03825	400	Nuc_H_symport: Nucleoside H+ symporter	98.07
KOG0255	521	consensus Synaptic vesicle transporter SVOP and re	98.05
PF06963	432	FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 Thi	98.05
PRK09848	448	glucuronide transporter; Provisional	98.03
KOG2504	509	consensus Monocarboxylate transporter [Carbohydrat	97.97
KOG2615	451	consensus Permease of the major facilitator superf	97.92
TIGR00926	654	2A1704 Peptide:H+ symporter (also transports b-lac	97.89
COG2211	467	MelB Na+/melibiose symporter and related transport	97.83
KOG0569	485	consensus Permease of the major facilitator superf	97.82
PF07672	267	MFS_Mycoplasma: Mycoplasma MFS transporter; InterP	97.8
PF06813	250	Nodulin-like: Nodulin-like; InterPro: IPR010658 Th	97.52
KOG2325	488	consensus Predicted transporter/transmembrane prot	97.49
KOG0254	513	consensus Predicted transporter (major facilitator	97.43
PF01770	412	Folate_carrier: Reduced folate carrier; InterPro:	97.23
PF03092	433	BT1: BT1 family; InterPro: IPR004324 Members of th	97.19
KOG2816	463	consensus Predicted transporter ADD1 (major facili	97.15
PF05631	354	DUF791: Protein of unknown function (DUF791); Inte	97.08
TIGR00926	654	2A1704 Peptide:H+ symporter (also transports b-lac	97.08
PF11700	477	ATG22: Vacuole effluxer Atg22 like; InterPro: IPR0	97.08
KOG2533	495	consensus Permease of the major facilitator superf	97.04
KOG3810	433	consensus Micronutrient transporters (folate trans	97.0
PF05631	354	DUF791: Protein of unknown function (DUF791); Inte	96.82
PF03209	403	PUCC: PUCC protein; InterPro: IPR004896 This prote	96.8
TIGR00769	472	AAA ADP/ATP carrier protein family. These proteins	96.5
KOG0252	538	consensus Inorganic phosphate transporter [Inorgan	96.25
KOG3762	618	consensus Predicted transporter [General function	96.15
KOG3098	461	consensus Uncharacterized conserved protein [Funct	95.97
PF06963	432	FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 Thi	95.95
PF00083	451	Sugar_tr: Sugar (and other) transporter; InterPro:	95.93
PF06779	85	DUF1228: Protein of unknown function (DUF1228); In	95.91
KOG2325	488	consensus Predicted transporter/transmembrane prot	95.9
PF02487	402	CLN3: CLN3 protein; InterPro: IPR003492 Batten's d	95.9
PRK03612	521	spermidine synthase; Provisional	95.81
PF03219	491	TLC: TLC ATP/ADP transporter; InterPro: IPR004667	95.7
KOG0253	528	consensus Synaptic vesicle transporter SV2 (major	95.65
KOG2563	480	consensus Permease of the major facilitator superf	95.46
COG0477	338	ProP Permeases of the major facilitator superfamil	95.11
PF00854	372	PTR2: POT family; InterPro: IPR000109 This entry r	94.97
COG2270	438	Permeases of the major facilitator superfamily [Ge	94.89
COG0477	338	ProP Permeases of the major facilitator superfamil	94.44
KOG3762	618	consensus Predicted transporter [General function	94.41
KOG0637	498	consensus Sucrose transporter and related proteins	94.25
COG3202	509	ATP/ADP translocase [Energy production and convers	93.59
TIGR01272	310	gluP glucose/galactose transporter. Disruption of	92.08
TIGR00769	472	AAA ADP/ATP carrier protein family. These proteins	91.46
KOG3574	510	consensus Acetyl-CoA transporter [Inorganic ion tr	90.92
PF00854	372	PTR2: POT family; InterPro: IPR000109 This entry r	90.67
PF06813	250	Nodulin-like: Nodulin-like; InterPro: IPR010658 Th	87.73
PF05978	156	UNC-93: Ion channel regulatory protein UNC-93; Int	87.53
PF02990	521	EMP70: Endomembrane protein 70; InterPro: IPR00424	87.53
KOG0637	498	consensus Sucrose transporter and related proteins	86.26
KOG4686	459	consensus Predicted sugar transporter [Carbohydrat	85.59
KOG1237	571	consensus H+/oligopeptide symporter [Amino acid tr	82.89
PF13000	544	Acatn: Acetyl-coenzyme A transporter 1; InterPro:	82.55
PF05978	156	UNC-93: Ion channel regulatory protein UNC-93; Int	82.4

>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]

Probab=100.00  E-value=1.4e-39  Score=301.29  Aligned_cols=307  Identities=38%  Similarity=0.765  Sum_probs=269.4

Q ss_pred             CCcccccchhhHHHHHhccCCCcchhHHHHHHHhhhhhHHHHhhhhHHHHhhh-cCCcchhHhhhhHHHHHHHHHHhhcc
Q 021674            1 MGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHR-FGWPSVFYSFGSLGTVWFTVWLSKAH   79 (309)
Q Consensus         1 ~Gig~g~~~p~~~~~i~~~~p~~~rg~~~g~~~~~~~~g~~lg~~l~~~l~~~-~gWr~~F~i~~~~~~v~~~~~~~~~~   79 (309)
                      ||+++|..+|+...+.++|+|++||++..++..++..+|.+++.+++|++.+. +|||++|++.|.+++++.++|+....
T Consensus       138 qGl~~g~~~pa~~~i~~~W~P~~Ers~~~ail~~g~q~g~v~~mp~sg~lc~s~~GW~sifY~~g~~g~i~~~~w~~~~~  217 (466)
T KOG2532|consen  138 QGLGQGVLFPAIGSILAKWAPPNERSTFIAILTAGSQLGTIITMPVSGLLCESSLGWPSIFYVFGIVGLIWFILWFLFYS  217 (466)
T ss_pred             hHHHHhHHHhhhhceeeeECCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhccCCCCchHHHHHHHHHHHHHHHHHHHhc
Confidence            89999999999999999999999999999999999999999999999999999 99999999999999999888888889


Q ss_pred             cCCCCCCCCCHHHHHHHHhccCCCCCC--CCCChhHhhcchHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhCCCccchh
Q 021674           80 SSPAEDPQLRPAEKKLIVSSCASKEPV--KTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESG  157 (309)
Q Consensus        80 ~~p~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~wlp~~l~~~~g~s~~~~g  157 (309)
                      |+|+++|..+++|++.+++++.+++.+  .++||++++++|.+|.+++..++.+++.+.+.+|+|+|+++++|++..+.|
T Consensus       218 d~P~~h~~is~~El~~I~~~k~~~~~~~~~~vP~~~i~ts~~vwai~~~~f~~~~~~~~l~~y~PtY~~~VL~f~v~~~G  297 (466)
T KOG2532|consen  218 DSPSKHPNISEKELKYIEKGKSEAHVKKKPPVPYKAILTSPPVWAIWISAFGGNWGFYLLLTYLPTYLKEVLGFDVRETG  297 (466)
T ss_pred             CCcccCCCCCHHHHHHHHhcccccccCCCCCCCHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCCChhhhh
Confidence            999999999999988876654433322  478999999999999999999999999999999999999999999999999


Q ss_pred             hHhhhhHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHhhHHHHHHHHHhhccC--chHHHHHHHHHHHhhhhhhhc
Q 021674          158 LFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVD--SPAMAVLCMACSQGTDAFSQS  235 (309)
Q Consensus       158 ~~~~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~  235 (309)
                      ++.+++.+.+.+..+++|+++||+.+|.++.+..||.+..+++.+.++++..+...+  ....++.++.++.+...+...
T Consensus       298 ~~salP~l~~~~~k~~~g~lsD~l~~~~ls~t~~rkifn~i~~~~~ai~l~~l~~~~~~~~~~a~~~l~~~~~~~g~~~~  377 (466)
T KOG2532|consen  298 FLSALPFLAMAIVKFVAGQLSDRLTFRILSETTVRKIFNTIAFGGPAVFLLVLAFTSDEHRLLAVILLTIAIGLSGFNIS  377 (466)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhhccCchHhHHHHHHhHHHHHHHHHHHeeeecCCCcchHHHHHHHHHHHHcccchh
Confidence            999999999999999999999999877666777788888888888777766555433  344555555555555556666


Q ss_pred             chhhhhhccCCCchHHHHHHHhHhHhhhhhHHHhHHHhhccc---CCchHHHHHHHHHHHHHHHHHHhhcCCccc
Q 021674          236 GLYSNHQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQH---GSWDDVFKVSVGLYLVGTAVWNLFSTGEKV  307 (309)
Q Consensus       236 ~~~~~~~~~~~~~~g~a~~~~~~~~~lgg~i~~~~~g~l~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  307 (309)
                      +.+.+..+..|++.+..+|+.|..+.+.++++|.++|.+...   .+|+.+|++.+++++++.+++.++.++|+.
T Consensus       378 Gf~~~~~~~apq~a~~l~g~~~~~~~~~~~~~P~~vg~~~~~~t~~eW~~VF~i~a~i~~~~~i~f~~f~s~e~~  452 (466)
T KOG2532|consen  378 GFYKNHQDIAPQHAGFVMGIINFVGALAGFIAPLLVGIIVTDNTREEWRIVFLIAAGILIVGNIIFLFFGSGEPA  452 (466)
T ss_pred             hhHhhhhhccchHHHHHHHHHHHHHHHHHHHHHHheeeEeCCCCHHHHHHHHHHHHHHHHHhchheeEeecCccc
Confidence            777777776899999999999999999999999999999943   479999999999999999999999766653

>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]

Probab=100.00  E-value=1.2e-33  Score=249.96  Aligned_cols=292  Identities=18%  Similarity=0.245  Sum_probs=212.4

Q ss_pred             CCcccccchhhHHHHHhccCCCcchhHHHHHHHhhhhhHHHHhhhhH--HHHhhhcCCcchhHhhhhHHHHHHHHHHhhc
Q 021674            1 MGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFS--PFLIHRFGWPSVFYSFGSLGTVWFTVWLSKA   78 (309)
Q Consensus         1 ~Gig~g~~~p~~~~~i~~~~p~~~rg~~~g~~~~~~~~g~~lg~~l~--~~l~~~~gWr~~F~i~~~~~~v~~~~~~~~~   78 (309)
                      +|..+|..+|++.+.+++|||++|||+..++|+.+.++|+.+.+++.  +++.++++||..|+..+++++++.++.++..
T Consensus       127 ng~fQg~Gwpp~~~~i~~Wfsr~eRG~~~siWn~shNiGGal~~~~~~la~~~~~~~w~~~f~~pgiiaiival~~~~~~  206 (448)
T COG2271         127 NGWFQGMGWPPCARTITHWFSRKERGTWWSIWNTSHNIGGALAPLVALLAFFAFHGGWRAAFYFPGIIAIIVALILLFLL  206 (448)
T ss_pred             HHHHhcCCCcHHHHHHHHHcCccccCceEEEehhhhhcccchHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHHh
Confidence            36778899999999999999999999999999999999999999999  9999999999999999999988877777778


Q ss_pred             ccCCCCCCCCCHHHHHH--HHhccCCCCCCCCC-----ChhHhhcchHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhCC
Q 021674           79 HSSPAEDPQLRPAEKKL--IVSSCASKEPVKTI-----PWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHF  151 (309)
Q Consensus        79 ~~~p~~~~~~~~~~~~~--~~~~~~~~~~~~~~-----~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~wlp~~l~~~~g~  151 (309)
                      +|+|++.. +++.|+..  ..+...++++.+..     -++.++|||..|.+.+.+.+.+...|++..|.|.|+.|++|+
T Consensus       207 rd~Pqs~G-LP~ie~~~~d~~e~~~~~~~~~~ls~~~i~~~YVL~Nk~iW~la~a~vfvYivR~gi~dW~p~YL~e~k~~  285 (448)
T COG2271         207 RDRPQSEG-LPPIEEYRGDPLEIYEEEKENEGLTAWQIFVKYVLKNKLIWLLALANVFVYVVRYGINDWGPLYLSEVKGF  285 (448)
T ss_pred             CCCccccC-CCCHHHhhcCchhhhhhhccCCCccHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhcCC
Confidence            88887542 22211110  00000001111111     235678999999999999999999999999999999999999


Q ss_pred             CccchhhHhhhhHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHhhHHHHHHHHHhhcc--CchHHHHH-HHHHHHh
Q 021674          152 NLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHV--DSPAMAVL-CMACSQG  228 (309)
Q Consensus       152 s~~~~g~~~~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~-~~~~~~~  228 (309)
                      |..++....+...+++..|+++.||+|||+.+.+      |..+..+.+++..+++...+..  ++..+... +...++.
T Consensus       286 s~~~a~~a~~lfE~agl~G~Ll~GwlSDklfkgr------R~p~~~i~~~~i~~~~~~~w~~~~~~~~l~~~~l~~iGf~  359 (448)
T COG2271         286 SLVKANWAISLFEVAGLPGTLLAGWLSDKLFKGR------RGPMALIFMLLITASLVLYWLAPNGSYLLDAILLFIIGFL  359 (448)
T ss_pred             CHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcccc------cchHHHHHHHHHHHHHHHHHcCCCccHHHHHHHHHHHHHH
Confidence            9999999999999999999999999999997433      2222223333333333333332  22233222 2222322


Q ss_pred             h-hhhhhcchhhhhhccCCC-chHHHHHHHhHhHhh-hhhHHHhHHHhhcccCCchHHHHHHHHHHHHHHHHHHhh
Q 021674          229 T-DAFSQSGLYSNHQDIAPR-YSGVLLGLSNTAGVL-AGVFGTAATGYILQHGSWDDVFKVSVGLYLVGTAVWNLF  301 (309)
Q Consensus       229 ~-~~~~~~~~~~~~~~~~~~-~~g~a~~~~~~~~~l-gg~i~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~  301 (309)
                      . ++-..-++  ...|..|+ ..|+|.|+.+..+++ |.+.+....|++.|..+|...|.+..+..+++.+....+
T Consensus       360 IyGPqmLiGl--~a~e~~pK~AaGtA~Gf~Glf~Yl~Ga~~a~~~~g~i~d~~gW~g~Fi~~~~~a~l~~lll~~~  433 (448)
T COG2271         360 IYGPQMLIGL--AAAEFVPKKAAGTATGFVGLFAYLIGAALAGLPLGYIADTWGWDGGFIVLSIAALLAILLLLPV  433 (448)
T ss_pred             HhhHHHHHHH--HHhccccHhhccchhchhhhHHHHhhHHhcCCcceeeEecCCCcchHHHHHHHHHHHHHHHHHH
Confidence            1 11111112  22456664 689999999999999 778899999999999889999988777777666554444

>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter

Probab=100.00  E-value=1.1e-31  Score=251.87  Aligned_cols=305  Identities=31%  Similarity=0.567  Sum_probs=223.3

Q ss_pred             CCcccccchhhHHHHHhccCCCcchhHHHHHHHhhhhhHHHHhhhhHHHHhhhc-CCcchhHhhhhHHHHHHHHHHhhcc
Q 021674            1 MGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRF-GWPSVFYSFGSLGTVWFTVWLSKAH   79 (309)
Q Consensus         1 ~Gig~g~~~p~~~~~i~~~~p~~~rg~~~g~~~~~~~~g~~lg~~l~~~l~~~~-gWr~~F~i~~~~~~v~~~~~~~~~~   79 (309)
                      ||+++|...|...++++||+|++||++++++..++.++|.++++++++++.+.+ |||+.|++.+++++++.++++...+
T Consensus       141 ~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~i~~~l~~~l~~~~~gw~~~f~i~~~~~~~~~~~~~~~~~  220 (465)
T TIGR00894       141 QGLAQGSVSPATHKIIVKWAPPKERSRLLGMSTSGFQLGTFIFLPISGWLCESWGGWPMIFYVFGIVGCAWSLLWFVFPA  220 (465)
T ss_pred             HHHhcccchhhHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCeehhhhhHHHHHHHHHHHHHhc
Confidence            589999999999999999999999999999999999999999999999999984 9999999988888777666666666


Q ss_pred             cCCCCCCCCCHHHHHHHHhccC-CC-CCCCCCChhHhhcchHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhCCCccchh
Q 021674           80 SSPAEDPQLRPAEKKLIVSSCA-SK-EPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESG  157 (309)
Q Consensus        80 ~~p~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~wlp~~l~~~~g~s~~~~g  157 (309)
                      |+|+++++.+++|++...+... ++ +..++.++++++|+|.+|......++.+++.+.+.+|+|.|+++.+|++..+++
T Consensus       221 ~~p~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~g  300 (465)
T TIGR00894       221 DDPSIHPCISKFEKKYINSSLQGQKGSTRQSLPIKAIPKSLPVWAIWFAIFGHFWLYTILPTYLPTFISWVLRVSGKENG  300 (465)
T ss_pred             CCcccCCCCCHHHHHHHHhhcccccCCCCCCCCHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcChHHhH
Confidence            7776655544444433221111 11 111245688999999999999999999999999999999999999999999999


Q ss_pred             hHhhhhHHHHHHHHHHHHHHHHHHHHcCCChhh-HHHHHHHHhhHHHHHHHHHhhc-cCchHHHHHHHHHHHhhhhhhhc
Q 021674          158 LFCVLPWLTMAFSANLGGWIADTLVSKGLSVTT-VRKIMQSIGFLGPAFFLTQLSH-VDSPAMAVLCMACSQGTDAFSQS  235 (309)
Q Consensus       158 ~~~~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~  235 (309)
                      +...++.++..++.+++|+++||.++|+..... .++................... .++....+.++..+.+.......
T Consensus       301 ~~~~~~~~~~~i~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~  380 (465)
T TIGR00894       301 LLSSLPYLFAWLCSIFAGYLADFLKSSKTLSLTAARKIFNGIGGLGPGIFAYALPYLSAAFYLTIIILTLANAVSSGPLA  380 (465)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHhhhhhh
Confidence            999999999999999999999999876543322 2222222222111111111111 22333333333222222111122


Q ss_pred             chhhhhhccCCCchHHHHHHHhHhHhhhhhHHHhHHHhhccc---CCchHHHHHHHHHHHHHHHHHHhhcCCc
Q 021674          236 GLYSNHQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQH---GSWDDVFKVSVGLYLVGTAVWNLFSTGE  305 (309)
Q Consensus       236 ~~~~~~~~~~~~~~g~a~~~~~~~~~lgg~i~~~~~g~l~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~  305 (309)
                      .......+..|+.+|.+.++.|+.+++++.++|.+.|.+.|.   ++|..+|.+.+++.+++.+....+.+++
T Consensus       381 ~~~~~~~~~~~~~~g~~~g~~~~~~~l~~~i~p~l~g~~~~~~~~~~~~~~f~~~~~~~~i~~i~~~~~~~~~  453 (465)
T TIGR00894       381 GVLINSLDLAPRFLGFIKGITGLPGFIGGLIASTLAGNILSQDSKNVWLIVFLIMAFVNILCVIFYLIFGSAE  453 (465)
T ss_pred             hhhhchhhcChhHHHHHHHHHHHHHHHHHHHHHHhhheeeCCCCchHHHHHHHHHHHHHHHHHHHeeeeecce
Confidence            233334566788999999999999999999999999999886   3488889888888888877766655444

>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]

Probab=99.97  E-value=1.8e-29  Score=225.85  Aligned_cols=274  Identities=23%  Similarity=0.293  Sum_probs=203.8

Q ss_pred             CcccccchhhHHHHHhccCCCcchhHHHHHHHhhhhhHHHHhhhhHHHHhhhcCCcchhHhhhhHHHHHHHHHHhhcccC
Q 021674            2 GIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVWLSKAHSS   81 (309)
Q Consensus         2 Gig~g~~~p~~~~~i~~~~p~~~rg~~~g~~~~~~~~g~~lg~~l~~~l~~~~gWr~~F~i~~~~~~v~~~~~~~~~~~~   81 (309)
                      |+.+|..++....+..+..||+||+++++++..+.+++.++|.|+|.++.|++|||+.|++.+.++++..+..++..|  
T Consensus       112 g~a~G~f~~i~~~~a~~lvpp~~~~~Aiaiv~~G~tlA~v~GvPLGt~ig~~~GWR~~F~~ia~l~ll~~~~~~~~lP--  189 (394)
T COG2814         112 GLAHGVFWSIAAALAARLVPPGKRGRALALVFTGLTLATVLGVPLGTFLGQLFGWRATFLAIAVLALLALLLLWKLLP--  189 (394)
T ss_pred             HHHHHHHHHHHHHHHHHHcCccchhhHHHHHHHHHHHHHHHhccHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhCC--
Confidence            678899999999999999999999999999999999999999999999999999999999999998876554444444  


Q ss_pred             CCCCCCCCHHHHHHHHhccCCCCCCCCCChhHhhcchHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhCCCccchhhHhh
Q 021674           82 PAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCV  161 (309)
Q Consensus        82 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~wlp~~l~~~~g~s~~~~g~~~~  161 (309)
                      |++.++-+               +.+..+..+++|+|+.|......++.+.++|..++|+-+++++..|+|....++.+.
T Consensus       190 ~~~~~~~~---------------~~~~~~~~~~l~~p~v~~~l~~t~l~~~g~F~~ftYi~P~L~~v~g~s~~~vs~~Ll  254 (394)
T COG2814         190 PSEISGSL---------------PGPLRTLLRLLRRPGVLLGLLATFLFMTGHFALYTYIRPFLESVAGFSVSAVSLVLL  254 (394)
T ss_pred             CccCCCCC---------------CcchhHHHHHhcCchHHHHHHHHHHHHcchhhhHHhHHHHHHHccCCCHhHHHHHHH
Confidence            22211100               000112346899999999999999999999999999999999999999999999999


Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHH-hhHHHHHHHHHhhccCchHHHHHH-HHHHHhhhhhhhcchhh
Q 021674          162 LPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSI-GFLGPAFFLTQLSHVDSPAMAVLC-MACSQGTDAFSQSGLYS  239 (309)
Q Consensus       162 ~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~  239 (309)
                      ..++++.+|+.++|+++|| +.|+        .+... .++....... ....+++...... ..+++......+. ...
T Consensus       255 ~~Gv~~~~Gn~~gGrl~dr-~~~~--------~l~~~~~l~a~~~l~l-~~~~~~~~~~~~~~~~wg~a~~~~~~~-~~~  323 (394)
T COG2814         255 AFGIAGFIGNLLGGRLADR-GPRR--------ALIAALLLLALALLAL-TFTGASPALALALLFLWGFAFSPALQG-LQT  323 (394)
T ss_pred             HHHHHHHHHHHHHhhhccc-cchh--------HHHHHHHHHHHHHHHH-HHhcchHHHHHHHHHHHHHHhhhhhhH-HHH
Confidence            9999999999999999999 5442        11111 1111111111 1122233332222 2233332222111 222


Q ss_pred             hhhccCCCchHHHHHHHhHhHhhhhhHHHhHHHhhcccCCchHHHHHHHHHHHHHHHHHHhhcC
Q 021674          240 NHQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSWDDVFKVSVGLYLVGTAVWNLFST  303 (309)
Q Consensus       240 ~~~~~~~~~~g~a~~~~~~~~~lgg~i~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  303 (309)
                      ...+..|+.+..+.++++...|+|-.+|..++|.++|+.++....++.+.+.+++.+....-.+
T Consensus       324 ~~a~~~p~~~~~a~sl~~aa~nlgia~GA~lGG~v~~~~g~~~~~~~~a~l~~~a~~~~~~~~~  387 (394)
T COG2814         324 RLARLAPDAADLAGSLNVAAFNLGIALGAALGGLVLDALGYAATGWVGAALLLLALLLALLSAR  387 (394)
T ss_pred             HhcccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHh
Confidence            2233567899999999999999999999999999999999999999888888777655444433

>PRK09556 uhpT sugar phosphate antiporter; Reviewed

Probab=99.97  E-value=2.1e-29  Score=236.49  Aligned_cols=292  Identities=17%  Similarity=0.138  Sum_probs=199.3

Q ss_pred             CCcccccchhhHHHHHhccCCCcchhHHHHHHHhhhhhHHHHhhhhHHHHhhhc---CCcchhHhhhhHHHHHHHHHHhh
Q 021674            1 MGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRF---GWPSVFYSFGSLGTVWFTVWLSK   77 (309)
Q Consensus         1 ~Gig~g~~~p~~~~~i~~~~p~~~rg~~~g~~~~~~~~g~~lg~~l~~~l~~~~---gWr~~F~i~~~~~~v~~~~~~~~   77 (309)
                      +|+++|...|...+++++|+|++|||+++|++..+.++|.++++++..++.+++   +||..|.+.+++++++.++++..
T Consensus       132 ~G~~~~~~~~~~~~~i~~~~~~~~rg~a~gi~~~~~~lG~~l~~~i~~~~~~~~~~~~~~~~f~~~g~~~~~~~i~~~~~  211 (467)
T PRK09556        132 SGFFQSTGGPCSYSTITRWTPRRKRGRFLGFWNISHNLGGAGAGGVALWGANYFFDGHVIGMFIFPSIIALIIGFIGLRY  211 (467)
T ss_pred             HHHHHhccchHHHHHHHHHcCccceeeeEEeeecccchhhhHHHHHHHHHHHhhccCcchhHHHHHHHHHHHHHHHHHHh
Confidence            478899999999999999999999999999999999999999999988877764   69999998888887765555555


Q ss_pred             cccCCCCCCCCCHHHHHH-H-HhccCCCCCCCCCC-----hhHhhcchHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhC
Q 021674           78 AHSSPAEDPQLRPAEKKL-I-VSSCASKEPVKTIP-----WGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLH  150 (309)
Q Consensus        78 ~~~~p~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~-----~~~l~~~~~~~~~~~~~~~~~~~~~~~~~wlp~~l~~~~g  150 (309)
                      .+|+|++.+..+++|... . .+++.+++. ++.+     .++++|||.+|...+..++.....++..+|+|.|+++++|
T Consensus       212 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~p~yl~~~~g  290 (467)
T PRK09556        212 GSDSPEELGWGKAEEIFGEPISEEDKETES-TDMTKWQIFVEYVLKNPVIWLLCFANIFLYIVRIGIDNWSPVYAFQELG  290 (467)
T ss_pred             CCCChhhcCCCChhhcccCccchhhhcccc-ccCcHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccC
Confidence            566665433222221000 0 000000000 0111     1236899999998888888888888999999999999999


Q ss_pred             CCccchhhHhhhhHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHhhHHHHHHHHHhhccCchHHH-HHHHHHHHhh
Q 021674          151 FNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSPAMA-VLCMACSQGT  229 (309)
Q Consensus       151 ~s~~~~g~~~~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~  229 (309)
                      +|..++++......++..++.+++|+++||+++|+....      ...... ...........++.... +..+..+...
T Consensus       291 ~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~g~r~~~~~------~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~G~~~  363 (467)
T PRK09556        291 FSKEDAINTFTLFEIGALVGSLLWGWLSDLANGRRALVA------CIALAL-IIFTLGVYQHATSEYMYLASLFALGFLV  363 (467)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCchHHH------HHHHHH-HHHHHHHHHhcCcHHHHHHHHHHHHHHH
Confidence            999999999998999999999999999999987642111      001111 11111111122233222 2222222211


Q ss_pred             hhhhhcchhhh-hhccCCCchHHHHHHHhHhHhh-hhhHHHhHHHhhcc------------cCCchHHHHHHHHHHHHHH
Q 021674          230 DAFSQSGLYSN-HQDIAPRYSGVLLGLSNTAGVL-AGVFGTAATGYILQ------------HGSWDDVFKVSVGLYLVGT  295 (309)
Q Consensus       230 ~~~~~~~~~~~-~~~~~~~~~g~a~~~~~~~~~l-gg~i~~~~~g~l~~------------~~~~~~~~~~~~~~~~~~~  295 (309)
                      .... ...... .+..+++.+|++.|+.|..+++ |++++|.+.|++.|            ..+|+..|.+..++.+++.
T Consensus       364 ~~~~-~~~~~~~~~~~p~~~~g~a~gi~~~~g~l~g~~~~~~~~G~i~~~~~~g~~~~~~~~~~~~~~f~~~~~~~~~~~  442 (467)
T PRK09556        364 FGPQ-LLIGVAAVGFVPKKAIGVANGIKGTFAYLFGDSFAKVGLGMIADPTKNGTPIFGYTLTGWAGTFAALDIAAIGCI  442 (467)
T ss_pred             hhHH-HHHHHHHHhhcchhhHHHHHHHHHHHHHHHhHHHHhhhHHHHhcccccccccccccccChHHHHHHHHHHHHHHH
Confidence            1111 111111 2334556899999999999997 66999999999999            5679999988877777776


Q ss_pred             HHHHhh
Q 021674          296 AVWNLF  301 (309)
Q Consensus       296 ~~~~~~  301 (309)
                      +....+
T Consensus       443 ~~~~~~  448 (467)
T PRK09556        443 CLMAIV  448 (467)
T ss_pred             HHHHHH
Confidence            555544

>TIGR00903 2A0129 major facilitator 4 family protein

Probab=99.97  E-value=8.5e-29  Score=225.22  Aligned_cols=273  Identities=14%  Similarity=0.060  Sum_probs=185.3

Q ss_pred             CCcccccchhhHHHHHhccCCCcchhHHHHHHHhhhhhHHHHhhhhHHHHhhhcCCcchhHhhhhHHHHHHHHHHhhccc
Q 021674            1 MGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVWLSKAHS   80 (309)
Q Consensus         1 ~Gig~g~~~p~~~~~i~~~~p~~~rg~~~g~~~~~~~~g~~lg~~l~~~l~~~~gWr~~F~i~~~~~~v~~~~~~~~~~~   80 (309)
                      +|+|+|. .+.....++||+|+|||++++++...+.++|.++++++++++.+++|||+.|++.++++++..++++...||
T Consensus        89 ~G~g~~~-~~~~~~~~~~~~~~~~r~~a~~~~~~~~~lG~~l~~~~~~~l~~~~gWr~~f~~~~~l~~~~~~~~~~~lp~  167 (368)
T TIGR00903        89 AALGQPF-LLNAFAPAASQIREERRDLVISLLSFAMYLGIIFALAAGLKIYTAGGLQLLIIPIAAVAAAGIILVLAALPA  167 (368)
T ss_pred             HHhHhHH-HHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHHHHHHcCC
Confidence            5788885 566667779999999999999999999999999999999999999999999999888887765556656777


Q ss_pred             CCCCCCCCCHHHHHHHHhccCCCCCCCCCChhHhhcchHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhCCCccchhhHh
Q 021674           81 SPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFC  160 (309)
Q Consensus        81 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~wlp~~l~~~~g~s~~~~g~~~  160 (309)
                      +|+++++..+. ++          .  ..++++++|||.+|.+...+++.....|++.+|+|+|+++ +|+|.. .+...
T Consensus       168 ~p~~~~~~~~~-~~----------~--~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~wlp~~L~~-~g~s~~-~~~~~  232 (368)
T TIGR00903       168 LPFQAAEGFGF-KD----------A--VKEFGALAGRKDLWIIGAILGFGVALFDNLAIWLEAALRP-AGLEDI-AGDAV  232 (368)
T ss_pred             CCCCCCCCcch-HH----------H--HHHHHHHHcChhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-CCCChH-HHHHH
Confidence            66543211000 00          0  0136788999999999999999999999999999999965 688864 66666


Q ss_pred             hhhHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHhhHHHHHHHHHhhccCchHHHHHHHHHHHhhhhhhhcchhhh
Q 021674          161 VLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSPAMAVLCMACSQGTDAFSQSGLYSN  240 (309)
Q Consensus       161 ~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (309)
                      .++.+.+.++   .++++||..||+.+....+.    . ....+.........+++...+.++...........+..+..
T Consensus       233 ~l~~~~g~~g---~~~~~d~~~r~~~r~~~~~~----~-~~~~a~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~  304 (368)
T TIGR00903       233 ALAILAGLIG---VAVIPDRVARAGLRSIYIRA----A-ALLIAAFFLALAFELNRLALFAFIGIAGLLMLPAYAIIMDW  304 (368)
T ss_pred             HHHHHHHHHH---HHHhhHHhhhhhhHHHHHHH----H-HHHHHHHHHHHHHccccHHHHHHHHHHHHhhhhhHHHHHHH
Confidence            6666555544   58999998765422111111    1 11111111111222223332222222111111111223333


Q ss_pred             hhccCC-CchHHHHHHHhHhHhhhhhHHHhHHHhhcccCCchHHHHHHHHHHHHHHHHHH
Q 021674          241 HQDIAP-RYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSWDDVFKVSVGLYLVGTAVWN  299 (309)
Q Consensus       241 ~~~~~~-~~~g~a~~~~~~~~~lgg~i~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~  299 (309)
                      ..|..| +.||++.|+.|..+++++..+|.+.+.+++  +.+..|.+.+++.+++++...
T Consensus       305 ~~~~~p~~~rgt~~G~~~~~g~~~~~~~~~~~~~~~~--~~~~~f~~~~~~~~i~~~~~~  362 (368)
T TIGR00903       305 IGKFCDKELHGKAAGAIGFTSRAISVALALAAMLFIS--SAEAYFTFLAILITIAFAIAL  362 (368)
T ss_pred             HHHhcchhhcCcccchhhHHHHHHHHHHHHHHHHHhc--CHHHHHHHHHHHHHHHHHHHH
Confidence            345444 689999999999999999999999998884  566777777777777766644

This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.

>PRK11663 regulatory protein UhpC; Provisional

Probab=99.97  E-value=1.5e-28  Score=228.64  Aligned_cols=293  Identities=15%  Similarity=0.133  Sum_probs=193.8

Q ss_pred             CcccccchhhHHHHHhccCCCcchhHHHHHHHhhhhhHHHHhhhhHHHHhhhcCCcchhHhhhhHHHHHHHHHHhhcccC
Q 021674            2 GIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVWLSKAHSS   81 (309)
Q Consensus         2 Gig~g~~~p~~~~~i~~~~p~~~rg~~~g~~~~~~~~g~~lg~~l~~~l~~~~gWr~~F~i~~~~~~v~~~~~~~~~~~~   81 (309)
                      |+++|..+|...+++.||+|+|||++++++++.+.++|.++++++.+++.+++|||+.|++.+++.++..+......+|+
T Consensus       122 g~~~g~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~~gw~~~f~~~~i~~~~~~~~~~~~~~~~  201 (434)
T PRK11663        122 AFFQGWGWPVCAKLLTAWYSRTERGGWWAIWNTAHNVGGALIPLVVGAIALHYGWRYGMMIAGIIAIVVGLFLCWRLRDK  201 (434)
T ss_pred             HHHHHccchHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence            67788888999999999999999999999999999999999999999999999999999988877655433333344555


Q ss_pred             CCCC--CCCCHHHHHHHHhccCCCCCCCCCChh-----HhhcchHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhCCCcc
Q 021674           82 PAED--PQLRPAEKKLIVSSCASKEPVKTIPWG-----LILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLT  154 (309)
Q Consensus        82 p~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~l~~~~~~~~~~~~~~~~~~~~~~~~~wlp~~l~~~~g~s~~  154 (309)
                      |++.  ++.++.+++. .+...++ +.++.+++     ..+|+|++|......++.....+++.+|+|+|+++++|+|..
T Consensus       202 p~~~~~~~~~~~~~~~-~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~  279 (434)
T PRK11663        202 PQAMGLPSVGEWRHDA-LELAQQQ-EGAGLSRKEILTKYVLLNPYIWLLSFSYVLVYVVRAAINDWGNLYMSETLGVDLV  279 (434)
T ss_pred             HhhcCCCCcccccccc-cccchhc-cccCCChhhhHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCHH
Confidence            4322  1110000000 0000000 00011222     256789999887777777777788899999999888999999


Q ss_pred             chhhHhhhhHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHhhHHHHHHHHHhhccCchHHH-HHHHHHHHhhhhhh
Q 021674          155 ESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSPAMA-VLCMACSQGTDAFS  233 (309)
Q Consensus       155 ~~g~~~~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~  233 (309)
                      +++...+...+++.++.++.|+++||+.+|++...   ..............+... ...+.... ..+...++..... 
T Consensus       280 ~a~~~~~~~~~~~~~g~~~~g~l~dr~~~~~r~~~---~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~~~~-  354 (434)
T PRK11663        280 TANSAVSMFELGGFIGALVAGWGSDKLFNGNRGPM---NLIFAAGILLSVGSLWLM-PFASYVMQAACFFTIGFFVFGP-  354 (434)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhhHHHhccCCccHH---HHHHHHHHHHHHHHHHHc-ccccHHHHHHHHHHHHHHHhhH-
Confidence            99999999999999999999999999954332111   011111111111111111 11222221 1122222111100 


Q ss_pred             hcchhhhhhc-cCCCchHHHHHHHhHhHhhhhhHHHhHHHhhcccCCchHHHHHHHHHHHHHHHHHHhh
Q 021674          234 QSGLYSNHQD-IAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSWDDVFKVSVGLYLVGTAVWNLF  301 (309)
Q Consensus       234 ~~~~~~~~~~-~~~~~~g~a~~~~~~~~~lgg~i~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~  301 (309)
                      .........| .+++.++.++|+.|+..++|++++|.+.|++.|+.+|...|.+.+++.+++++.....
T Consensus       355 ~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~p~~~g~l~~~~g~~~~f~~~~~~~~~~~~~~~~~  423 (434)
T PRK11663        355 QMLIGMAAAECSHKEAAGAATGFVGLFAYLGAALSGYPLAKVLEIWHWTGFFVVISIAAGISALLLLPF  423 (434)
T ss_pred             HHHHHHHHHhcccHhhHHhHHHHHHHHHHHHHHHhcccHHHHHHhcccHHHHHHHHHHHHHHHHHHHHH
Confidence            1111112233 3457899999999999999999999999999999889999998888877776555443

>TIGR00893 2A0114 d-galactonate transporter

Probab=99.96  E-value=2.4e-27  Score=215.82  Aligned_cols=296  Identities=25%  Similarity=0.412  Sum_probs=202.4

Q ss_pred             CCcccccchhhHHHHHhccCCCcchhHHHHHHHhhhhhHHHHhhhhHHHHhhhcCCcchhHhhhhHHHHHHHHHHhhccc
Q 021674            1 MGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVWLSKAHS   80 (309)
Q Consensus         1 ~Gig~g~~~p~~~~~i~~~~p~~~rg~~~g~~~~~~~~g~~lg~~l~~~l~~~~gWr~~F~i~~~~~~v~~~~~~~~~~~   80 (309)
                      +|++.+...|...+++.|++|+|||++++++.....++|.++++++++++.++.+||+.|++.+++.++..+..+...+|
T Consensus        92 ~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  171 (399)
T TIGR00893        92 LGAAEAPFFPGIILIVASWFPASERATAVSIFNSAQGLGGIIGGPLVGWILIHFSWQWAFIIEGVLGIIWGVLWLKFIPD  171 (399)
T ss_pred             HHHHHHhhhhHHHHHHHHhCCHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHhhheecC
Confidence            47888899999999999999999999999999999999999999999999999999999998877766554443333444


Q ss_pred             CCCCCCCCCHHHHHHHHhc----c--CCCCCCCCCChhHhhcchHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhCCCcc
Q 021674           81 SPAEDPQLRPAEKKLIVSS----C--ASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLT  154 (309)
Q Consensus        81 ~p~~~~~~~~~~~~~~~~~----~--~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~wlp~~l~~~~g~s~~  154 (309)
                      +|+++++.++++++...++    .  .++++.+..+.++++|+|+++......++.....+...+|+|.|+++.+|+|..
T Consensus       172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  251 (399)
T TIGR00893       172 PPQKAKWLTEEEKYIVVGGLLAEQQGKGPSTPKKYQIKELLKDRRVWGLALGQFLVNIGLGFFLTWFPTYLVQERGLSIL  251 (399)
T ss_pred             CCCccccCCHHHHhhcchhhccccccccccCCCccchHHHhcCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcccHH
Confidence            4433222222222111110    0  011111223456788999999888888888888889999999999999999999


Q ss_pred             chhhHhhhhHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHhhHHHHHHHHHhhccCchHHHHHHHHHHHhhhhhhh
Q 021674          155 ESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSPAMAVLCMACSQGTDAFSQ  234 (309)
Q Consensus       155 ~~g~~~~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (309)
                      +.+.+.....++..++.++.|+++||+++|+........ ...................+...........+..... ..
T Consensus       252 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~  329 (399)
T TIGR00893       252 EAGFMASLPGIVGFIGMILGGRLSDLLLRRGKSLVFARK-TAIIAGLVLSLLMFATNYVNIPYAALALVALGFFGLG-AG  329 (399)
T ss_pred             HhhHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHH-HHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHhchh-hh
Confidence            999999999999999999999999999987532221111 1111111111111111111222222222222211111 12


Q ss_pred             cchhhhhhc-cCCCchHHHHHHHhHhHhhhhhHHHhHHHhhcccCC-chHHHHHHHHHHHHHHHHH
Q 021674          235 SGLYSNHQD-IAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGS-WDDVFKVSVGLYLVGTAVW  298 (309)
Q Consensus       235 ~~~~~~~~~-~~~~~~g~a~~~~~~~~~lgg~i~~~~~g~l~~~~~-~~~~~~~~~~~~~~~~~~~  298 (309)
                      +..+....| .++++++.+.++.+...++++.++|.+.|.+.|..+ |...|.+.+++.+++.+..
T Consensus       330 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~  395 (399)
T TIGR00893       330 AIGWALISDNAPGNIAGLTGGLINSLGNLGGIVGPIVIGAIAATTGSFAGALMVVAALALIGALSY  395 (399)
T ss_pred             hHHHHHHHhhcChhHHHHHHHHHHHHHHHhhhhhhHHhhhhccCCCchhHHHHHHHHHHHHHHHHH
Confidence            222333333 456789999999999999999999999999999866 8888888777776665544

>TIGR02332 HpaX 4-hydroxyphenylacetate permease

Probab=99.96  E-value=5.9e-28  Score=223.25  Aligned_cols=280  Identities=19%  Similarity=0.282  Sum_probs=189.0

Q ss_pred             CCcccccchhhHHHHHhccCCCcchhHHHHHHHhhhhhHHHHhhhhHHHHhh------hcCCcchhHhhhhHHHHHHHHH
Q 021674            1 MGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIH------RFGWPSVFYSFGSLGTVWFTVW   74 (309)
Q Consensus         1 ~Gig~g~~~p~~~~~i~~~~p~~~rg~~~g~~~~~~~~g~~lg~~l~~~l~~------~~gWr~~F~i~~~~~~v~~~~~   74 (309)
                      +|+++|+..|...++++||+|+|||++++++++.+.++|.++++++++++.+      ..|||++|++.++++++...+.
T Consensus       106 ~G~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~gwr~~f~~~~~~~l~~~~~~  185 (412)
T TIGR02332       106 VGIAEAGFLPGILLYLTFWFPAYFRARANALFMIAMPVTMALGLILSGYILALDGLMALKGWQWLFLLEGFPSVILGVMT  185 (412)
T ss_pred             HHHHHhhHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCccchhHHHHHHHHHHHHHHHHH
Confidence            5889999999999999999999999999999999999999999999998874      4799999999888776654444


Q ss_pred             HhhcccCCCCCCCCCHHHHHHHHh----ccCC-CCC-----CCCC----ChhHhhcchHHHHHHHHHHHHHHHHHHHHHh
Q 021674           75 LSKAHSSPAEDPQLRPAEKKLIVS----SCAS-KEP-----VKTI----PWGLILSKPPVWALIVSHFCHNWGTFILLTW  140 (309)
Q Consensus        75 ~~~~~~~p~~~~~~~~~~~~~~~~----~~~~-~~~-----~~~~----~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~w  140 (309)
                      ....+|+|++.+..+++|++...+    +..+ +++     .++.    .++++ ++|.+|.....+++....++++.+|
T Consensus       186 ~~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~  264 (412)
T TIGR02332       186 WFWLDDSPDKAKWLDEEDKKALKEMIDNDQLTLEQPEGAFAHAAMPQRSMLREI-FTPAIMLYTLAYFCLTNTLSAINIW  264 (412)
T ss_pred             hhccCCCcccCCCCCHHHHHHHHHHHHhccccccccccccccccccHHHHHHHh-cChHHHHHHHHHHHHHHHHHHHHHH
Confidence            445577765443333333321110    1000 000     0011    23443 3577888888888888889999999


Q ss_pred             HHHHHHH-HhCCCccchhhHhhhhHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHhhHHHHHHHHHhhccCchHHH
Q 021674          141 MPTYYNQ-VLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSPAMA  219 (309)
Q Consensus       141 lp~~l~~-~~g~s~~~~g~~~~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  219 (309)
                      +|+|+++ ..|+|..+++.+..+..++..++.++.|+++||+++|+....      .........+.+..  ..+++...
T Consensus       265 ~p~~l~~~~~~~s~~~~~~~~~~~~l~~~~g~l~~g~l~dr~~~r~~~~~------~~~~~~~~~~~~~~--~~~~~~~~  336 (412)
T TIGR02332       265 TPQILQSFNQGSSNIMIGLLAAIPQFCTIFGMIWWSRHSDRLKERKHHTA------LPYLFAAAGWLLAS--ATDHNLIQ  336 (412)
T ss_pred             HHHHHHhcCCCCcHHHhHHHhhHHHHHHHHHHHHHHHHhcccCccHHHHH------HHHHHHHHHHHHHH--hcCCHHHH
Confidence            9999987 347888899999999999999999999999999986531111      00001111111111  12222222


Q ss_pred             HH-HHHHHHhhhhhhhcch-hhhhh-ccCCCchHHHHHHHhHhHhhhhhHHHhHHHhhccc-CCchHHHHHHHHHH
Q 021674          220 VL-CMACSQGTDAFSQSGL-YSNHQ-DIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQH-GSWDDVFKVSVGLY  291 (309)
Q Consensus       220 ~~-~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~g~a~~~~~~~~~lgg~i~~~~~g~l~~~-~~~~~~~~~~~~~~  291 (309)
                      .. +.....+.  ...... +.... ..++++++++.|+.|..+++|++++|.+.|.+.|. ++|+..+.+.+++.
T Consensus       337 ~~~~~~~~~g~--~~~~~~~~~~~~~~~~~~~~~~a~g~~~~~~~~g~~~~p~~~g~i~~~~g~~~~~~~~~~~~~  410 (412)
T TIGR02332       337 LLGIIMASMGS--FSAMAIFWTTPDQSISLQARAIAIAVINATGNIGSALSPFLIGILKDATGSFNSGLWFVAALL  410 (412)
T ss_pred             HHHHHHHHHHh--hhhhhHHHhhcccccchHHHHHHHHHHHHhhhhhhhhhhhhcccccccCCCCchhHHHHHHHH
Confidence            11 11111111  111111 12222 34567899999999999999999999999999998 56998887666544

This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.

>PRK03545 putative arabinose transporter; Provisional

Probab=99.96  E-value=8.3e-27  Score=213.98  Aligned_cols=273  Identities=15%  Similarity=0.165  Sum_probs=195.4

Q ss_pred             CCcccccchhhHHHHHhccCCCcchhHHHHHHHhhhhhHHHHhhhhHHHHhhhcCCcchhHhhhhHHHHHHHHHHhhccc
Q 021674            1 MGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVWLSKAHS   80 (309)
Q Consensus         1 ~Gig~g~~~p~~~~~i~~~~p~~~rg~~~g~~~~~~~~g~~lg~~l~~~l~~~~gWr~~F~i~~~~~~v~~~~~~~~~~~   80 (309)
                      ||++.+...|...+++.|++|+|||++++|++..+.++|..+++++++.+.+++|||+.|++.+++.++......+..||
T Consensus       107 ~G~~~~~~~~~~~~~i~~~~~~~~r~~~~g~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~~~~l~~~~~~~~~~~  186 (390)
T PRK03545        107 IAFAHAIFWSITASLAIRVAPAGKKAQALSLLATGTALAMVLGLPLGRVIGQYLGWRTTFLAIGGGALITLLLLIKLLPL  186 (390)
T ss_pred             HHHHHHHHHHHHHHHHHHhCChhhhhhHHHHHHHHHHHHHHHHhhHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence            46777888899999999999999999999999999999999999999999999999999999888776654333333343


Q ss_pred             CCCCCCCCCHHHHHHHHhccCCCCCCCCCChhHhhcchHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhCCCccchhhHh
Q 021674           81 SPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFC  160 (309)
Q Consensus        81 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~wlp~~l~~~~g~s~~~~g~~~  160 (309)
                      +|++++   +              +  ..+.++++|||.++......++.....+...+|+|+|+++.+|+|..+.+.+.
T Consensus       187 ~~~~~~---~--------------~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~  247 (390)
T PRK03545        187 LPSEHS---G--------------S--LKSLPLLFRRPALVSLYLLTVVVVTAHFTAYSYIEPFVQQVAGLSENFATLLL  247 (390)
T ss_pred             CCCCCc---c--------------h--HHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccHHHHHH
Confidence            222110   0              0  01245678999888776666666667777889999999988999999999999


Q ss_pred             hhhHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHhhHHHHHHHHHhhccCchHHH-HHHHHHHHhhhhhhhcchhh
Q 021674          161 VLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSPAMA-VLCMACSQGTDAFSQSGLYS  239 (309)
Q Consensus       161 ~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~  239 (309)
                      ....++..+++++.|+++||+++|.        ............... ....++.... ......+.+..... .....
T Consensus       248 ~~~~~~~~~g~~~~g~l~dr~~~~~--------~~~~~~~~~~~~~~l-~~~~~~~~~~~~~~~l~g~~~~~~~-~~~~~  317 (390)
T PRK03545        248 LLFGGAGIIGSVLFSRLGNRHPSGF--------LLIAIALLLVCLLLL-LPAANSEWHLSVLSIFWGIAIMCIG-LAMQV  317 (390)
T ss_pred             HHHHHHHHHHHHHHHHHhhccchhH--------HHHHHHHHHHHHHHH-HHHhchHHHHHHHHHHHHHHHhcch-HHHHH
Confidence            9899999999999999999987542        111111111111111 1122223222 22222232221111 11222


Q ss_pred             hhhccCCCchHHHHHHHhHhHhhhhhHHHhHHHhhcccCCchHHHHHHHHHHHHHHHHHHhhc
Q 021674          240 NHQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSWDDVFKVSVGLYLVGTAVWNLFS  302 (309)
Q Consensus       240 ~~~~~~~~~~g~a~~~~~~~~~lgg~i~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~  302 (309)
                      ...+..|+.++.+.++.+...++|..+||.+.|.+.|+.+++..|...+.+.+++.+......
T Consensus       318 ~~~~~~~~~~~~~~g~~~~~~~~g~~~G~~~~G~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~  380 (390)
T PRK03545        318 KVLKLAPDATDVAMALFSGIFNIGIGAGALLGNQVSLHLGLSSIGYVGAALALAALVWSILIF  380 (390)
T ss_pred             HHHHhCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhccChhHHHHHHHHHHHHHHHHHHHHc
Confidence            333456778899999999999999999999999999998999999988888887776655555

>PRK10406 alpha-ketoglutarate transporter; Provisional

Probab=99.95  E-value=1.8e-26  Score=214.69  Aligned_cols=283  Identities=14%  Similarity=0.110  Sum_probs=182.2

Q ss_pred             CCcccccchhhHHHHHhccCCCcchhHHHHHHHhhhhhHHHHhhhhHHHHh--------hhcCCcchhHhhhhHHHHHHH
Q 021674            1 MGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLI--------HRFGWPSVFYSFGSLGTVWFT   72 (309)
Q Consensus         1 ~Gig~g~~~p~~~~~i~~~~p~~~rg~~~g~~~~~~~~g~~lg~~l~~~l~--------~~~gWr~~F~i~~~~~~v~~~   72 (309)
                      ||+|+|+++|.+.++++|++|+||||++.++...+...|..+++.+...+.        +.+|||++|++.++++++.  
T Consensus       134 ~G~g~g~~~~~~~~~i~e~~p~~~rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~gWr~~F~i~~~~~ll~--  211 (432)
T PRK10406        134 QGLSVGGEYGTSATYMSEVAVEGRKGFYASFQYVTLIGGQLLALLVVVVLQQTLEDAELREWGWRIPFALGAVLAVVA--  211 (432)
T ss_pred             HHhhhhhhHhhHHHHHHHhCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHhccchHHHHHHHHHHHHHH--
Confidence            699999999999999999999999999999999998888888887665543        3689999999877666554  


Q ss_pred             HHHhh-cccCCCCCCCCCHHHHHHHHhccCCCCCCCCCChhHhhcchHHHHHHHHHHH-HHHHHHHHHHhHHHHHHHHhC
Q 021674           73 VWLSK-AHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFC-HNWGTFILLTWMPTYYNQVLH  150 (309)
Q Consensus        73 ~~~~~-~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~-~~~~~~~~~~wlp~~l~~~~g  150 (309)
                      ++++. .+|+|+       .|++.       +++  ..++++++|+++.|......++ ....+|++.+|+|+|+++.+|
T Consensus       212 ~~~~~~~~e~~~-------~~~~~-------~~~--~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g  275 (432)
T PRK10406        212 LWLRRQLDETSQ-------QETRA-------LKE--AGSLKGLWRNRRAFIMVLGFTAAGSLCFYTFTTYMQKYLVNTAG  275 (432)
T ss_pred             HHHHhcCCCCch-------HHHhh-------hcc--cccHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence            22322 233221       11110       001  2357788999988876555444 366788999999999999899


Q ss_pred             CCccchhhHhhhhHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHhhHHHHH-HHHHhhccCchHHHHHHHHHHHhh
Q 021674          151 FNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAF-FLTQLSHVDSPAMAVLCMACSQGT  229 (309)
Q Consensus       151 ~s~~~~g~~~~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~  229 (309)
                      ++..+.+....+..++..++.++.|+++||++||+...      ...+....... ........+++...+.+...+...
T Consensus       276 ~s~~~~~~~~~i~~~~~~i~~~~~G~l~Dr~grr~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  349 (432)
T PRK10406        276 MHANVASGIMTAALFVFMLIQPLIGALSDKIGRRTSML------CFGSLAALFTVPILSALQNVSSPYAAFGLVMCALLI  349 (432)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHH------HHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHH
Confidence            99989988888888888889999999999998763111      00110100111 111111222333222222111111


Q ss_pred             hhhhhcchhhhhhc-cCCCchHHHHHHHhHhHhh-hhhHHHhHHHhhcccCCchHHHHHHHHHHHHHHHHHHhhcCCccc
Q 021674          230 DAFSQSGLYSNHQD-IAPRYSGVLLGLSNTAGVL-AGVFGTAATGYILQHGSWDDVFKVSVGLYLVGTAVWNLFSTGEKV  307 (309)
Q Consensus       230 ~~~~~~~~~~~~~~-~~~~~~g~a~~~~~~~~~l-gg~i~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  307 (309)
                      .............| .+++.|+++.|+.|..+++ .+...|.+.+.+-+.+.|...+...+++.+++.+...+..+|+|.
T Consensus       350 ~~~~~~~~~~~~~e~fp~~~r~t~~g~~~~~g~~~~g~~~p~~~~~l~~~g~~~~~~~~~~~~~~i~~~~~~~l~~~~~~  429 (432)
T PRK10406        350 VSFYTSISGILKAEMFPAQVRALGVGLSYAVANALFGGSAEYVALSLKSIGMETAFFWYVTLMAVVAFLVSLMLHRKGKG  429 (432)
T ss_pred             HHHHHHHHHHHHHHHCCCCccchhhhHHHHHHHHHHHhHHHHHHHHHHHhCCCcHHHHHHHHHHHHHHHHHHHhhhcccc
Confidence            11111112222233 4567899999999988875 355688888855333557667776666776666665666666554

>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional

Probab=99.95  E-value=4.2e-26  Score=213.37  Aligned_cols=290  Identities=17%  Similarity=0.215  Sum_probs=183.1

Q ss_pred             CCcccccchhhHHHHHhccCCCcchhHHHHHHHhhhhhHHHH-hhhhHHHHhhhcCCcchhHhhhhHHHHHHHHHHhhcc
Q 021674            1 MGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVT-GLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVWLSKAH   79 (309)
Q Consensus         1 ~Gig~g~~~p~~~~~i~~~~p~~~rg~~~g~~~~~~~~g~~l-g~~l~~~l~~~~gWr~~F~i~~~~~~v~~~~~~~~~~   79 (309)
                      +|+++|...|...+.+.+|+|+|+|++++++++.+.++|..+ ++.++..+....|||+.|++.+++.++..++.+...+
T Consensus       130 ~gi~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~gw~~~f~i~~~~~~~~~~l~~~~~~  209 (452)
T PRK11273        130 CGWFQGMGWPPCGRTMVHWWSQKERGGIVSVWNCAHNVGGGLPPLLFLLGMAWFNDWHAALYMPAFAAILVALFAFAMMR  209 (452)
T ss_pred             HHHHHhccchHHHHHHHHhCChHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHcc
Confidence            367788888988899999999999999999999999998755 4444434444569999999988776665444444455


Q ss_pred             cCCCCCCCCCHHHHHH-HHhccCCCCCCCCCCh-----hHhhcchHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhCCCc
Q 021674           80 SSPAEDPQLRPAEKKL-IVSSCASKEPVKTIPW-----GLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNL  153 (309)
Q Consensus        80 ~~p~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~-----~~l~~~~~~~~~~~~~~~~~~~~~~~~~wlp~~l~~~~g~s~  153 (309)
                      |+|++.+..+++|.+. ..++..+++. ++.+.     +.++|+|.+|...+..++.+...++..+|+|.|+++++|++.
T Consensus       210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~P~~l~~~~g~s~  288 (452)
T PRK11273        210 DTPQSCGLPPIEEYKNDYPDDYNEKHE-QELTAKQIFMQYVLPNKLLWYIAIANVFVYLLRYGILDWSPTYLKEVKHFAL  288 (452)
T ss_pred             CCHhhcCCCChhhhhhccccccccccC-CCccHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCH
Confidence            5554321111111000 0000000000 01111     236789999988888888877888999999999999999999


Q ss_pred             cchhhHhhhhHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHhhHHHHHHHHHhhccCchHHH-HHHHHHHHhhhhh
Q 021674          154 TESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSPAMA-VLCMACSQGTDAF  232 (309)
Q Consensus       154 ~~~g~~~~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~  232 (309)
                      .+++.+..+..++..++.++.|+++||++++++...    .+....+..............++... +.....+......
T Consensus       289 ~~~~~~~~~~~~~~~~g~~~~G~l~dr~~~~r~~~~----~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~  364 (452)
T PRK11273        289 DKSSWAYFLYEYAGIPGTLLCGWMSDKVFRGNRGAT----GVFFMTLVTIATIVYWLNPAGNPTVDMACMIVIGFLIYGP  364 (452)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCcchH----HHHHHHHHHHHHHHHHHhcccChHHHHHHHHHHHHHHHhH
Confidence            999988888888999999999999999964332111    01111111111111111112222222 2222222211111


Q ss_pred             hhcchhh-hhhccCCCchHHHHHHHhHhHhhhhhH-HHhHHHhhcccCCchHHHHHHHHHHHHHHH
Q 021674          233 SQSGLYS-NHQDIAPRYSGVLLGLSNTAGVLAGVF-GTAATGYILQHGSWDDVFKVSVGLYLVGTA  296 (309)
Q Consensus       233 ~~~~~~~-~~~~~~~~~~g~a~~~~~~~~~lgg~i-~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~  296 (309)
                       ...... ..+..+++.+|.++|+.+..+++++.+ +|.+.|++.|+.+|+..|++..++.+++++
T Consensus       365 -~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~g~~v~g~l~~~~g~~~~f~~~~~~~~~~~~  429 (452)
T PRK11273        365 -VMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFFGWDGGFMVMIGGSILAVI  429 (452)
T ss_pred             -HHHHHHHHHHHcChhhhhhHHHHHHHHHHHHHHHhhhhhHHHHHHHhcchHHHHHHHHHHHHHHH
Confidence             111111 123345678999999999999998875 799999999997899999877666665543

>TIGR00712 glpT glycerol-3-phosphate transporter

Probab=99.95  E-value=2.2e-26  Score=214.42  Aligned_cols=299  Identities=17%  Similarity=0.251  Sum_probs=192.4

Q ss_pred             CcccccchhhHHHHHhccCCCcchhHHHHHHHhhhhhHHHHhhhhHHHHhh-hcCCcchhHhhhhHHHHHHHHHHhhccc
Q 021674            2 GIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIH-RFGWPSVFYSFGSLGTVWFTVWLSKAHS   80 (309)
Q Consensus         2 Gig~g~~~p~~~~~i~~~~p~~~rg~~~g~~~~~~~~g~~lg~~l~~~l~~-~~gWr~~F~i~~~~~~v~~~~~~~~~~~   80 (309)
                      |+++|..+|.....+.|++|+|||++++++.+++.++|..+++++.+...+ +.|||+.|++.+++.++..+..+...+|
T Consensus       129 g~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~w~~~f~~~~~~~~i~~~~~~~~~~~  208 (438)
T TIGR00712       129 GWFQGMGWPPCGRTMVHWWSQSERGTIVSIWNCAHNIGGGIPPLLVLLGMAWFNDWHAALYFPAICAIIVALFAFAMMRD  208 (438)
T ss_pred             HHHhhcchHHHHHHHHHhcCcccchhHHHHHHHHHHhHhHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHhccC
Confidence            667788888889999999999999999999999999999999988776544 5799999999888776644333334455


Q ss_pred             CCCCCCCCCHHHHHHH-HhccCCCCCCCCCC-----hhHhhcchHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhCCCcc
Q 021674           81 SPAEDPQLRPAEKKLI-VSSCASKEPVKTIP-----WGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLT  154 (309)
Q Consensus        81 ~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~-----~~~l~~~~~~~~~~~~~~~~~~~~~~~~~wlp~~l~~~~g~s~~  154 (309)
                      +|++++ .++.++... .+++..+++.++.+     ++.++|||.+|......++.+...+++.+|+|.|+++..|+|+.
T Consensus       209 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~  287 (438)
T TIGR00712       209 TPQSCG-LPPIEEYRNDYPDDYNEKAEQELTAKEIFMQYVLPNKLLWYIAIANVFVYLLRYGVLDWSPTYLKEVKHFALD  287 (438)
T ss_pred             CHHhcC-CCCchhcccccccccccccccccchHHHHHHHHccCchHHHHHHHHHHHHHHHHHHHHhHHHHHHHccCCChh
Confidence            443221 111110000 00000000000111     23468899999887777777777889999999999998999999


Q ss_pred             chhhHhhhhHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHhhHHHHHHHHHhhccCchHHHHH-HHHHHHhhhhhh
Q 021674          155 ESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSPAMAVL-CMACSQGTDAFS  233 (309)
Q Consensus       155 ~~g~~~~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~  233 (309)
                      +++++..+..+...++++++|+++||++++++....   ... .................+...... .+..+.+.... 
T Consensus       288 ~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~---~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~-  362 (438)
T TIGR00712       288 KSSWAYFLYEYAGIPGTLLCGWMSDKVFKGNRGATG---VFF-MTLVTIAVIVYWMNPAGNPLVDMICMIVIGFLIYGP-  362 (438)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHhccCcccHHH---HHH-HHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHccH-
Confidence            999999989999999999999999999754322110   000 100011111111111122222211 11122211100 


Q ss_pred             hcchhh-hhhccCCCchHHHHHHHhHhHhhhh-hHHHhHHHhhcccCCchHHHHHHHHHHHHHHHHHHhhcCCcc
Q 021674          234 QSGLYS-NHQDIAPRYSGVLLGLSNTAGVLAG-VFGTAATGYILQHGSWDDVFKVSVGLYLVGTAVWNLFSTGEK  306 (309)
Q Consensus       234 ~~~~~~-~~~~~~~~~~g~a~~~~~~~~~lgg-~i~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  306 (309)
                      ...... ..+..+++.++++.|+.|..+++++ +++|.+.|.+.|+.+|+..+.+..++.+++.+...+..+.||
T Consensus       363 ~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~gg~~~gp~l~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  437 (438)
T TIGR00712       363 VMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFFGWDGGFMVMIGGSILAVILLIVVMIGEK  437 (438)
T ss_pred             HHHHHHHHHHhcChhheeeehhhhchHHHhhhhhhcchhHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence            010111 1233455789999999999999876 589999999999988999998877777767666555554443

This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.

>PRK10642 proline/glycine betaine transporter; Provisional

Probab=99.94  E-value=8.3e-25  Score=206.62  Aligned_cols=284  Identities=15%  Similarity=0.152  Sum_probs=171.1

Q ss_pred             CCcccccchhhHHHHHhccCCCcchhHHHHHHHhhhhhHHHHhhhhHHHHh--------hhcCCcchhHhhhhHHHHHHH
Q 021674            1 MGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLI--------HRFGWPSVFYSFGSLGTVWFT   72 (309)
Q Consensus         1 ~Gig~g~~~p~~~~~i~~~~p~~~rg~~~g~~~~~~~~g~~lg~~l~~~l~--------~~~gWr~~F~i~~~~~~v~~~   72 (309)
                      ||+|.|+++|++.++++||+|+|+||++.++...+..+|.++|+.+..++.        +++|||+.|++.++++++. .
T Consensus       128 ~G~g~g~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~G~~lg~~~~~~~~~~~~~~~~~~~gWR~~f~i~~~~~l~~-~  206 (490)
T PRK10642        128 QGFSVGGEYTGASIFVAEYSPDRKRGFMGSWLDFGSIAGFVLGAGVVVLISTIVGEANFLDWGWRIPFFIALPLGIIG-L  206 (490)
T ss_pred             HHhHhHhhHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHhcCccHHHHHHHHHHHHHHH-H
Confidence            699999999999999999999999999999999998899988887665443        3689999999866555432 2


Q ss_pred             HHHhhcccCCCCCCCCCHHHHHHHHhccCCCCCCCCCChhHhhcc-hHHHH-HHHHHHHHHHHHHHHHHhHHHHHHHHhC
Q 021674           73 VWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSK-PPVWA-LIVSHFCHNWGTFILLTWMPTYYNQVLH  150 (309)
Q Consensus        73 ~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~-~~~~~~~~~~~~~~~~~wlp~~l~~~~g  150 (309)
                      +..+..+|+|+..    +..++....+....++.++.++++++|+ ++.+. .....++.+..+|++.+|+|+|+++.+|
T Consensus       207 ~~~~~~~esp~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g  282 (490)
T PRK10642        207 YLRHALEETPAFQ----QHVDKLEQGDREGLQDGPKVSFKEIATKHWRSLLTCIGLVIATNVTYYMLLTYMPSYLSHNLH  282 (490)
T ss_pred             HHHHcCCCChhHH----HHHHhhhhhccccccccccCCHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence            2223345544311    0000000000000001123466777654 33332 2233345567788999999999998899


Q ss_pred             CCccchhhHhhhhHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHH-hhHHHHHHHHHhhccCchHHHHH-HHHHHHh
Q 021674          151 FNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSI-GFLGPAFFLTQLSHVDSPAMAVL-CMACSQG  228 (309)
Q Consensus       151 ~s~~~~g~~~~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~  228 (309)
                      ++..+.++......++..++.++.|+++||+|||+..       +... .+.............++...... ....+++
T Consensus       283 ~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~  355 (490)
T PRK10642        283 YSEDHGVLIIIAIMIGMLFVQPVMGLLSDRFGRRPFV-------ILGSVALFVLAIPAFILINSNVIGLIFAGLLMLAVI  355 (490)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHH-------HHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHH
Confidence            9988888877777888999999999999999976311       1111 11111111111111222222211 1111111


Q ss_pred             hhhhhhcchhhhhh-ccCCCchHHHHHHHhHhHhhhhhHHHhHHHhhccc-CCchHHHHHHHHHHHHHHHH
Q 021674          229 TDAFSQSGLYSNHQ-DIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQH-GSWDDVFKVSVGLYLVGTAV  297 (309)
Q Consensus       229 ~~~~~~~~~~~~~~-~~~~~~~g~a~~~~~~~~~lgg~i~~~~~g~l~~~-~~~~~~~~~~~~~~~~~~~~  297 (309)
                      .+.. .+....... ..+++.|+++.++.+..+++++.++|.+.+++.+. ++|...+....++.+++.+.
T Consensus       356 ~~~~-~g~~~~~~~~~~p~~~Rg~~~g~~~~~~~~~g~~~p~i~g~l~~~~~~~~~~~~~~~~~~~i~~~~  425 (490)
T PRK10642        356 LNCF-TGVMASTLPAMFPTHIRYSALAAAFNISVLVAGLTPTLAAWLVESTQNLMMPAYYLMVVAVIGLIT  425 (490)
T ss_pred             HHHH-HHHHHHHHHHHCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHH
Confidence            1111 111111122 34667899999986666888889999999999886 44554444444444444433

>PLN00028 nitrate transmembrane transporter; Provisional

Probab=99.94  E-value=4.4e-25  Score=207.67  Aligned_cols=290  Identities=14%  Similarity=0.097  Sum_probs=183.4

Q ss_pred             CCcccccchhhHHHHHhccCCCcchhHHHHHHHhhhhhHHHHhhhhHHHHhh---------hcCCcchhHhhhhHHHHHH
Q 021674            1 MGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIH---------RFGWPSVFYSFGSLGTVWF   71 (309)
Q Consensus         1 ~Gig~g~~~p~~~~~i~~~~p~~~rg~~~g~~~~~~~~g~~lg~~l~~~l~~---------~~gWr~~F~i~~~~~~v~~   71 (309)
                      +|++++...+ ....++||+|+++||+++|+.++..++|..+++.+.+.+..         ..|||+.|++.+++.++..
T Consensus       134 ~G~~~~~~~~-~~~~i~~~~~~~~rg~a~g~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~gWr~~f~i~g~l~l~~~  212 (476)
T PLN00028        134 IGFSLATFVS-CQYWMSTMFNGKIVGTANGIAAGWGNLGGGVTQLLMPLVFPLIKDAGAPSFTAWRIAFFVPGLLHIIMG  212 (476)
T ss_pred             HHHHHHhhHH-HHHHHHHhcChhheeHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcchhhhHHHHHHHHHHHHHHH
Confidence            3667766544 55688999999999999999998888888887766655432         2589999999888887654


Q ss_pred             HHHHhhcccCCCCCCCCCHHHHHHHHhccCCCCCCCCCChhHhhcchHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhCC
Q 021674           72 TVWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHF  151 (309)
Q Consensus        72 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~wlp~~l~~~~g~  151 (309)
                      +..+...+|.|+++  .++.++    +++.++++ ....+++.+++++.|...+.+++.....+.+.+|+|+|+++.+|+
T Consensus       213 l~~~~~~~~~p~~~--~~~~~~----~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~  285 (476)
T PLN00028        213 ILVLTLGQDLPDGN--YRELKK----SGTMPKDS-FSKVLRYGVTNYRTWILALTYGYSFGVELTMDNIIAEYFYDRFGL  285 (476)
T ss_pred             HHHHHHcCcCCCCc--hhhHHh----cCcccccc-HHHHHHHHHcCchhHHHHHHHHHHHHHHHHHHhHHHHHHHHhcCC
Confidence            44443333433221  111111    00000100 011245667889988877776665556678889999999988999


Q ss_pred             CccchhhHhhhhHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHhhHHHHHHHHHhhccCchHHHHH-HHHHHHhhh
Q 021674          152 NLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSPAMAVL-CMACSQGTD  230 (309)
Q Consensus       152 s~~~~g~~~~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~  230 (309)
                      +..+++.+..+..++..++.+++|+++||+++|.....  |+....................++....+. +...+++..
T Consensus       286 s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~~~r~~~~~--r~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~l~~~~~~  363 (476)
T PLN00028        286 SLETAGAIAASFGLMNLFARPAGGYLSDVAARRFGMRG--RLWALWIVQTLGGVFCIWLGRANSLGAAIVVMILFSIFVQ  363 (476)
T ss_pred             CHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHhcCcch--hHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999997632111  222221222112111122222223222221 111121111


Q ss_pred             hhhhcchhhhhhccCCCchHHHHHHHhHhHhhhhhHHHhHHHhhcccCCchHHHHHHHHHHHHHHHHHHhhc
Q 021674          231 AFSQSGLYSNHQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSWDDVFKVSVGLYLVGTAVWNLFS  302 (309)
Q Consensus       231 ~~~~~~~~~~~~~~~~~~~g~a~~~~~~~~~lgg~i~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~  302 (309)
                       ...+..++...+..|+.+|++.|+.|..+++|++++|.+.+ .-+.++|..+|.+.+++.+++.+...+..
T Consensus       364 -~~~~~~~~~~~~~~~~~~g~~~g~~~~~g~lg~~i~~~l~~-~~~~~~y~~~f~~~~~~~~i~~~~~~~~~  433 (476)
T PLN00028        364 -AACGATFGIVPFVSRRSLGVISGLTGAGGNVGAVLTQLLFF-TGSSYSTETGISLMGVMIIACTLPVAFIH  433 (476)
T ss_pred             -HhhhhhcccCcccChhhchhhhhhhhccccHHHHHHHHHHH-hcCCccHhhHHHHHHHHHHHHHHHHHhee
Confidence             11122333334566788999999999988888888887765 22345798999888877777776665553

>PRK09952 shikimate transporter; Provisional

Probab=99.94  E-value=1e-24  Score=203.24  Aligned_cols=285  Identities=15%  Similarity=0.188  Sum_probs=178.5

Q ss_pred             CCcccccchhhHHHHHhccCCCcchhHHHHHHHhhhhhHHHHhhhhHHHHhh--------hcCCcchhHhhhhHHHHHHH
Q 021674            1 MGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIH--------RFGWPSVFYSFGSLGTVWFT   72 (309)
Q Consensus         1 ~Gig~g~~~p~~~~~i~~~~p~~~rg~~~g~~~~~~~~g~~lg~~l~~~l~~--------~~gWr~~F~i~~~~~~v~~~   72 (309)
                      ||+++|+++|.+.++++|++|+|||++..+....+..+|.+++..+..++.+        ++|||+.|++.+++.++.  
T Consensus       135 ~G~~~g~~~~~~~~~~~e~~p~~~rg~~~~~~~~g~~~G~~l~~~~~~~l~~~~~~~~~~~~gWr~~f~~~~~~~l~~--  212 (438)
T PRK09952        135 QGFAVGGEWGGAALLAVESAPKNKKAFYSSGVQVGYGVGLLLSTGLVSLISMMTTDEQFLSWGWRIPFLFSIVLVLIA--  212 (438)
T ss_pred             HHhhhcccHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHhhccChHHHHHHHHHHHHHH--
Confidence            6999999999999999999999999999999999999999999888776653        589999999866655432  


Q ss_pred             HHHhh-cccCCCCCCCCCHHHHHHHHhccCCCCCCCCCCh-hHhhcchHHHHHHH-HHHHHHHHHHHHHHhHHHHHHHHh
Q 021674           73 VWLSK-AHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPW-GLILSKPPVWALIV-SHFCHNWGTFILLTWMPTYYNQVL  149 (309)
Q Consensus        73 ~~~~~-~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~~~~~~~~~~-~~~~~~~~~~~~~~wlp~~l~~~~  149 (309)
                      .+++. .+|+|+    ..  +++   ++.+++  +++.++ +.++|+|+.|.... ..++.....|...+|+|.|+++++
T Consensus       213 ~~l~~~~~es~~----~~--~~~---~~~~~~--~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~  281 (438)
T PRK09952        213 LWVRNGMEESAE----FE--QQQ---HEQAAA--KKRIPVIEALLRHPGAFLKIIALRLCELLTMYIVTAFALNYSTQNL  281 (438)
T ss_pred             HHHHHhCCCChh----HH--HHH---hhcccc--cccCCHHHHHHHchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence            23322 233221    10  110   000000  112233 34677887776543 455566778899999999999999


Q ss_pred             CCCccchhhHhhhhHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHhhHHHHH-HHHHhhccCchHHHHHHHHH-HH
Q 021674          150 HFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAF-FLTQLSHVDSPAMAVLCMAC-SQ  227 (309)
Q Consensus       150 g~s~~~~g~~~~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~-~~  227 (309)
                      |++..+........++...++.++.|+++||++||+....      ..+....... +.......+.....+..... +.
T Consensus       282 g~s~~~~~~~~~~~g~~~~i~~~~~g~l~Dr~grr~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~  355 (438)
T PRK09952        282 GLPRELFLNIGLLVGGLSCLTIPCFAWLADRFGRRRVYIT------GALIGTLSAFPFFMALEAQSIFWIVFFSIMLANI  355 (438)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHH------HHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHH
Confidence            9988765555556677788899999999999987632110      0010001111 11111111222222211111 11


Q ss_pred             hhhhhhhcchhhhhhc-cCCCchHHHHHHHhHhHh-hhhhHHHhHHHhhccc--CCchHHHHHHHHHHHHHHHHHHhhcC
Q 021674          228 GTDAFSQSGLYSNHQD-IAPRYSGVLLGLSNTAGV-LAGVFGTAATGYILQH--GSWDDVFKVSVGLYLVGTAVWNLFST  303 (309)
Q Consensus       228 ~~~~~~~~~~~~~~~~-~~~~~~g~a~~~~~~~~~-lgg~i~~~~~g~l~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~  303 (309)
                      +.+ ...+..++...| .+++.|+++.++.+..++ +++.++|.+.+++.|.  ++|...+...+++.+++.+......+
T Consensus       356 ~~~-~~~~~~~~~~~e~~p~~~r~tg~g~~~~~~~~lgg~~~p~i~g~l~~~~~~~~~~~~~~~~~~~~i~~v~~~~~~~  434 (438)
T PRK09952        356 AHD-MVVCVQQPMFTEMFGASYRYSGAGVGYQVASVVGGGFTPFIAAALVTYFGGSWHSVAIYLLAGCLISAMTALLMKD  434 (438)
T ss_pred             HHH-HHHHHHHHHHHHHCCcchhHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHHccc
Confidence            111 111222233334 345678888888665554 8999999999999885  35877777777777777666555554


Q ss_pred             Cc
Q 021674          304 GE  305 (309)
Q Consensus       304 ~~  305 (309)
                      +|
T Consensus       435 ~~  436 (438)
T PRK09952        435 NQ  436 (438)
T ss_pred             cc
Confidence            44

>PRK09705 cynX putative cyanate transporter; Provisional

Probab=99.94  E-value=1.7e-24  Score=199.03  Aligned_cols=271  Identities=17%  Similarity=0.183  Sum_probs=183.0

Q ss_pred             CCcccccchhhHHHHHhccCCCcchhHHHHHHHhhhhhHHHHhhhhHHHHhhhc-CCcchhHhhhhHHHHHHHHHHhhcc
Q 021674            1 MGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRF-GWPSVFYSFGSLGTVWFTVWLSKAH   79 (309)
Q Consensus         1 ~Gig~g~~~p~~~~~i~~~~p~~~rg~~~g~~~~~~~~g~~lg~~l~~~l~~~~-gWr~~F~i~~~~~~v~~~~~~~~~~   79 (309)
                      ||+|+|...+....++.+|+| +||+++++++.++.++|..+++.+++++.++. +||+.|.+.++..++....++...+
T Consensus       107 ~Gig~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~~g~~~~~~l~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~  185 (393)
T PRK09705        107 GGVGIGIIQAVMPSVIKRRFQ-QRTPLVMGLWSAALMGGGGLGAAITPWLVQHSETWYQTLAWWALPAVVALFAWWWQSA  185 (393)
T ss_pred             HHhHHHHHhhhhhHHHHHHcc-ccchhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHhc
Confidence            589999999999999999997 88999999999999999999999999999886 8999988766555443333322222


Q ss_pred             cCCCCCCCCCHHHHHHHHhccCCCCCCCCCChhHhhcchHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhCCCccchhhH
Q 021674           80 SSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLF  159 (309)
Q Consensus        80 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~wlp~~l~~~~g~s~~~~g~~  159 (309)
                      ++|+++    +            +++   .+.++.+|+|+.|.+....++.+..+++..+|+|+|+++ +|+|..+++..
T Consensus       186 ~~~~~~----~------------~~~---~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~lp~~l~~-~g~s~~~ag~~  245 (393)
T PRK09705        186 REVASS----H------------KTT---TTPVRVVFTPRAWTLGVYFGLINGGYASLIAWLPAFYIE-IGASAQYSGSL  245 (393)
T ss_pred             CCCccc----c------------CCC---cCCcccccCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCChhhhhHH
Confidence            222111    0            000   011235678888887777777777888999999999987 79999999999


Q ss_pred             hhhhHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHhhHHHHHHHHHhhccCchHHHHHHHHHHHhhhhhhhcchhh
Q 021674          160 CVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSPAMAVLCMACSQGTDAFSQSGLYS  239 (309)
Q Consensus       160 ~~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (309)
                      ..+..+++.+++++.|++.||.++|+.       ......+......... ....+..... ....+.+.+.........
T Consensus       246 ~~~~~i~~i~g~~~~g~l~~r~~~~~~-------~~~~~~l~~~~~~~~~-~~~~~~~~~~-~~l~g~g~g~~~~~~~~~  316 (393)
T PRK09705        246 LALMTLGQAAGALLMPAMARHQDRRKL-------LMLALVLQLVGFCGFI-WLPLQLPVLW-AMVCGLGLGGAFPLCLLL  316 (393)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhccchHH-------HHHHHHHHHHHHHHHH-HccchHHHHH-HHHHHHhccchHHHHHHH
Confidence            999999999999999999999986531       1111111111111111 1111111111 112222222111111111


Q ss_pred             hhhccC-CCchHHHHHHHhHhHhhhhhHHHhHHHhhccc-CCchHHHHHHHHHHHHHHHHHHhh
Q 021674          240 NHQDIA-PRYSGVLLGLSNTAGVLAGVFGTAATGYILQH-GSWDDVFKVSVGLYLVGTAVWNLF  301 (309)
Q Consensus       240 ~~~~~~-~~~~g~a~~~~~~~~~lgg~i~~~~~g~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~  301 (309)
                      ..++.+ +++++...++.+..+++++.++|.+.|++.|+ ++|...|.+.+.+.++..+....+
T Consensus       317 ~~~~~~~~~~~g~~~g~~~~~~~~~~~~gp~~~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~  380 (393)
T PRK09705        317 ALDHSVQPAIAGKLVAFMQGIGFIIAGLAPWFSGVLRSISGNYLMDWAFHALCVVGLMIITLRF  380 (393)
T ss_pred             HHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHh
Confidence            223333 35789999999999999999999999999998 568888888776666555444444

>TIGR00897 2A0118 polyol permease family

Probab=99.94  E-value=3.2e-24  Score=197.71  Aligned_cols=282  Identities=16%  Similarity=0.123  Sum_probs=186.9

Q ss_pred             CCcccccchhhHHHHHhccCCCcchhHHHHHHHhhhhhHH-HHhhhhHHHHhhhcCCcchhHhhhhHHHHHHHHHHhhcc
Q 021674            1 MGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGS-VTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVWLSKAH   79 (309)
Q Consensus         1 ~Gig~g~~~p~~~~~i~~~~p~~~rg~~~g~~~~~~~~g~-~lg~~l~~~l~~~~gWr~~F~i~~~~~~v~~~~~~~~~~   79 (309)
                      +|+|.+...+.....+.+++|+|||++++|+.+++.++|. ++++++++++.+++||+..++.......+...+.....+
T Consensus       115 ~G~g~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~g~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~  194 (402)
T TIGR00897       115 RGLGYPLFAYSFLVWVVYNTKQDNLSSAVGWFWAVYSIGIGVFGSYYSSYAIPAFGEMNTLWSALAFVLTGGVIALFSNK  194 (402)
T ss_pred             HHcchHHHHhHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHHHHHHHhccC
Confidence            4777777888888889999999999999999999999996 689999999999999776665433222221112222223


Q ss_pred             cCCCCCCCCCHHHHHHHHhccCCCCCCCCCChhHhhcchHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhCCCccchhhH
Q 021674           80 SSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLF  159 (309)
Q Consensus        80 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~wlp~~l~~~~g~s~~~~g~~  159 (309)
                      |+++.+ +.+++++        .++.  +.++++++|||++|...+..++.....++..+|+|.|+++ +|+|..+.+.+
T Consensus       195 ~~~~~~-~~~~~~~--------~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~-~g~s~~~~~~~  262 (402)
T TIGR00897       195 DIFTPQ-HMQTREK--------FSEL--GKAATILFTNPNVLLGGMVRIINTIGLFGFAVFLPMFVAE-LGFSTSEWLQI  262 (402)
T ss_pred             CCCCcc-cccCCcc--------hhhH--HHHHHHHHcChhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCChhHHHHH
Confidence            321110 0000000        0000  1134568899999988888888888889999999999865 89999999998


Q ss_pred             hhhhHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHhhHHHHHHHHHhh--ccCchHHH-HHHHHHHHhhhhhhhcc
Q 021674          160 CVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLS--HVDSPAMA-VLCMACSQGTDAFSQSG  236 (309)
Q Consensus       160 ~~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~-~~~~~~~~~~~~~~~~~  236 (309)
                      .....+++.++++..|+++||+++|+...     .............+....  ..++.... +.....+.+....  ..
T Consensus       263 ~~~~~~~~~ig~~~~g~l~dr~~~~~~~~-----~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~G~~~~~~--~~  335 (402)
T TIGR00897       263 WGTFFFTNIVFNVIFGIVGDKLGWMNTVR-----WFGGVGCGIFTLALYYIPQHFGHSFAVALIIAIALGIFLAGY--VP  335 (402)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhcchhHHH-----HHHHHHHHHHHHHHHHHHHccCCcHHHHHHHHHHHHHHHHHH--HH
Confidence            88889999999999999999998664211     000111111111111111  11222222 2222223222221  11


Q ss_pred             hhhhhhccCCCchHHHHHHHhHhHhhhhhHHHhHHHhhcccCCchHHHHHHHHHHHHHHHHHHhh
Q 021674          237 LYSNHQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSWDDVFKVSVGLYLVGTAVWNLF  301 (309)
Q Consensus       237 ~~~~~~~~~~~~~g~a~~~~~~~~~lgg~i~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~  301 (309)
                      ......+..|+++|.+.|+.|...++++.++|.+.|.+.|..++...+++.+++++++.+...+.
T Consensus       336 ~~~~~~~~~~~~~g~~~g~~~~~~~lg~~~gp~i~g~l~~~~g~~~~~~~~a~~~~i~~~~~~~~  400 (402)
T TIGR00897       336 LAAVFPTLAPKHKGAAMSVLNLSAGLSAFLAPAIAVLFIGFFGAIGVVWIFAALYVVSAFLTAFI  400 (402)
T ss_pred             HHHHHHhhCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHh
Confidence            22233456778899999999999999999999999999999888888888888887776655443

This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.

>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]

Probab=99.93  E-value=3.2e-25  Score=196.89  Aligned_cols=272  Identities=20%  Similarity=0.287  Sum_probs=199.0

Q ss_pred             ccchhhHHHHHhccCCCcchhHHHHHHHhhhhhHHHHhhhhHHHHhhhcC---CcchhHhhhhHHHHHHHHHHhhcccCC
Q 021674            6 GVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFG---WPSVFYSFGSLGTVWFTVWLSKAHSSP   82 (309)
Q Consensus         6 g~~~p~~~~~i~~~~p~~~rg~~~g~~~~~~~~g~~lg~~l~~~l~~~~g---Wr~~F~i~~~~~~v~~~~~~~~~~~~p   82 (309)
                      |+.+..+...+++|||||++|.++|+.. ..|+|..+...+..+++...|   ||.+-.+..+..++..++......|.|
T Consensus       119 GasFav~m~~~s~~fP~~~qG~AlGI~g-~GN~G~av~q~~~P~v~~~~g~~~w~~~~~i~~~~l~v~~v~~~~~~~d~p  197 (417)
T COG2223         119 GASFAVGMPNASFFFPKEKQGLALGIAG-AGNLGVAVAQLVAPLVAVAFGFLAWRNVAGIYVVALAIAAVLAWLGMNDVP  197 (417)
T ss_pred             cceehcccccccccCChhhhhHHHHHhc-cccccHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhCCCh
Confidence            5677888899999999999999999999 779999999999999999999   999998877666554444444455544


Q ss_pred             CCCCCCCHHHHHHHHhccCCCCCCCCCChhHhhcchHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhCCCccchhhHhhh
Q 021674           83 AEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVL  162 (309)
Q Consensus        83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~wlp~~l~~~~g~s~~~~g~~~~~  162 (309)
                      +.+++.++.               .+.+++.++||+..|.+.+.|+...-++-++..|+|.|+++++|.++.++|.+...
T Consensus       198 ~~r~~~~~~---------------~~~~~~~v~~~~~~W~lsllY~~tFG~Fvgfs~~l~~~~~~~fg~~~~~Ag~~a~~  262 (417)
T COG2223         198 EHRASVKPQ---------------LPAQLKAVFSNKDTWLLSLLYFATFGGFVGFSAYLPMYLVTQFGLSPVTAGLIAFL  262 (417)
T ss_pred             hhhcccccc---------------chhHHHHHhcCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhhHHHHHHH
Confidence            322111110               01235678899999999999998877889999999999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHhhHHHHHHHHHhhcc-----CchHHHHH-HHHHHHhhhhhhhcc
Q 021674          163 PWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHV-----DSPAMAVL-CMACSQGTDAFSQSG  236 (309)
Q Consensus       163 ~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~-~~~~~~~~~~~~~~~  236 (309)
                      ..+.+.+..+++|+++||+|.+|....      ..+.+..... .......     .+...... ++... .+....+..
T Consensus       263 f~~~g~l~Rp~GG~LsDR~Gg~rv~~~------~f~~~~~~~~-~l~~~~~~~~~~~~~~~~~~~~l~l~-~~~G~GnGs  334 (417)
T COG2223         263 FPLIGALARPLGGWLSDRIGGRRVTLA------VFVGMALAAA-LLSLFLTGFGHGGSFVVFVAVFLALF-VFAGLGNGS  334 (417)
T ss_pred             HHHHHHHHHhccchhhhhccchhHHHH------HHHHHHHHHH-HHHccccccccCcchHHHHHHHHHHH-HHhccCcch
Confidence            999999999999999999997742211      1111111111 1111110     11222222 22221 122344556


Q ss_pred             hhhhhhccCCCchHHHHHHHhHhHhhhhhHHHhHHHhhccc-CCchHHHHHHHHHHHHHHHHHHhh
Q 021674          237 LYSNHQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQH-GSWDDVFKVSVGLYLVGTAVWNLF  301 (309)
Q Consensus       237 ~~~~~~~~~~~~~g~a~~~~~~~~~lgg~i~~~~~g~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~  301 (309)
                      ++...+...|++.|.+.|+...++.+||+.-|...|...|. ++++..|++...+++++.+.....
T Consensus       335 vfk~Ip~if~~~~G~v~G~vga~G~lGGf~lp~~~g~~~~~tg~~~~~f~~~~~~~~~a~v~~~~~  400 (417)
T COG2223         335 VFKMIPVIFPKETGAVTGIVGAIGGLGGFFLPLAFGVSLDLTGSYTGAFMLLLAFYLVALVLTWAL  400 (417)
T ss_pred             heeechHHHHhhhhHHHHHHHHhccccccchhHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHH
Confidence            66666666778999999999999999999999999999998 558999999888888887644444

>PRK14995 methyl viologen resistance protein SmvA; Provisional

Probab=99.93  E-value=2.7e-24  Score=203.40  Aligned_cols=264  Identities=16%  Similarity=0.120  Sum_probs=180.6

Q ss_pred             CCcccccchhhHHHHHhccC-CCcchhHHHHHHHhhhhhHHHHhhhhHHHHhhhcCCcchhHhhhhHHHHHHHHHHhhcc
Q 021674            1 MGIGEGVAMPAMNNILSKWV-PVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVWLSKAH   79 (309)
Q Consensus         1 ~Gig~g~~~p~~~~~i~~~~-p~~~rg~~~g~~~~~~~~g~~lg~~l~~~l~~~~gWr~~F~i~~~~~~v~~~~~~~~~~   79 (309)
                      ||+|.++..|....++.+++ |+|||++++|++....++|..+||++++++.+++||||.|++..++.++...+..+..|
T Consensus       104 ~G~g~~~~~~~~~~~l~~~~~~~~~r~~~~g~~~~~~~~g~~~gp~lgg~l~~~~gwr~~f~i~~~~~~~~~~l~~~~l~  183 (495)
T PRK14995        104 LAIGAAMIVPATLAGIRATFTEEKQRNMALGVWAAVGSGGAAFGPLVGGILLEHFYWGSVFLINVPIVLVVMGLTARYVP  183 (495)
T ss_pred             HHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHHHHHHHhCC
Confidence            68899999999999888887 68999999999999999999999999999999999999999987777665444444445


Q ss_pred             cCCCCC-CCCCHHHHHH---------------------------------------HHhccCCCCCCCCCChhHhhcchH
Q 021674           80 SSPAED-PQLRPAEKKL---------------------------------------IVSSCASKEPVKTIPWGLILSKPP  119 (309)
Q Consensus        80 ~~p~~~-~~~~~~~~~~---------------------------------------~~~~~~~~~~~~~~~~~~l~~~~~  119 (309)
                      ++|+++ ++.+..+...                                       ...+...++|  ..|+ +++|+|.
T Consensus       184 ~~~~~~~~~~d~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~f~~~e~~~~~p--~~~~-~lf~~~~  260 (495)
T PRK14995        184 RQAGRRDQPLNLGHALMLIVAILLLVYSAKTALKGFLSLWVTSLTLLTGALLLGLFIRTQLAASRP--MIDM-RLFTHRI  260 (495)
T ss_pred             CCCCCCCCCCChHhHHHHHHHHHHHHHHHHhccccCCchHHHHHHHHHHHHHHHHHHHHHhcCCCC--CcCH-HHhCCcc
Confidence            544321 1122111000                                       0001111111  2233 5789998


Q ss_pred             HHHHHHHHHHHHHHHHHHHHhHHHHHHHHhCCCccchhhHhhhhHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHh
Q 021674          120 VWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIG  199 (309)
Q Consensus       120 ~~~~~~~~~~~~~~~~~~~~wlp~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~~~  199 (309)
                      ++......++.....++...++|.|+|+.+|+|+.++|+++.+..++..+++++.|++.||+++|+..         ..+
T Consensus       261 ~~~~~~~~~~~~~~~~~~~~~~~~~lq~v~g~s~~~ag~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~---------~~g  331 (495)
T PRK14995        261 ILSGVVMAMTAMITLVGFELLMAQELQFVHGLSPLEAGMFMLPVMVASGFSGPIAGILVSRLGLRLVA---------TGG  331 (495)
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHH---------HHH
Confidence            88777777777777888899999999999999999999999999999999999999999999865311         111


Q ss_pred             hHHHH---HHHHHhhccCchHH-HHHHHHHHHhhhhhhhcchhhhhhccCCCchHHHHHHHhHhHhhhhhHHHhHHHhhc
Q 021674          200 FLGPA---FFLTQLSHVDSPAM-AVLCMACSQGTDAFSQSGLYSNHQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYIL  275 (309)
Q Consensus       200 ~~~~~---~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~a~~~~~~~~~lgg~i~~~~~g~l~  275 (309)
                      .....   ..+......++... .......+++.+............+.++++++.+.++.|+.+++|+.+|+.+.|.+.
T Consensus       332 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~G~g~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~lG~~~G~ai~g~i~  411 (495)
T PRK14995        332 MALSALSFYGLAMTDFSTQQWQAWGLMALLGFSAASALLASTSAIMAAAPPEKAAAAGAIETMAYELGAGLGIAIFGLLL  411 (495)
T ss_pred             HHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCHHhcchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            11111   11111111122222 222222333333221111122234456678999999999999999999999999986


Q ss_pred             c
Q 021674          276 Q  276 (309)
Q Consensus       276 ~  276 (309)
                      +
T Consensus       412 ~  412 (495)
T PRK14995        412 S  412 (495)
T ss_pred             H
Confidence            5

>PRK03699 putative transporter; Provisional

Probab=99.93  E-value=5.3e-24  Score=195.72  Aligned_cols=269  Identities=14%  Similarity=0.192  Sum_probs=178.8

Q ss_pred             CCcccccchhhHHHHHhccCCCcchhHHHHHHHhhhhhHHHHhhhhHHHHhh-hcCCcchhHhhhhHHHHHHHHHHhhcc
Q 021674            1 MGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIH-RFGWPSVFYSFGSLGTVWFTVWLSKAH   79 (309)
Q Consensus         1 ~Gig~g~~~p~~~~~i~~~~p~~~rg~~~g~~~~~~~~g~~lg~~l~~~l~~-~~gWr~~F~i~~~~~~v~~~~~~~~~~   79 (309)
                      +|++.|...+....++.|++|+|+|+++++..+...++|..+++++.+.+.+ .+|||+.|.+.+++.++..++.++  .
T Consensus       105 ~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~gw~~~f~~~~~~~~~~~~~~~~--~  182 (394)
T PRK03699        105 LGVVSGITMSIGTFLITHVYEGKQRGSRLLFTDSFFSMAGMIFPIIAAYLLARSIEWYWVYACIGLVYVAIFILTLF--S  182 (394)
T ss_pred             HHHhhHhhccchhHHhhhhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHHh--c
Confidence            4677888888999999999999999999999999999999999998888764 579999999888776654433332  1


Q ss_pred             cCCCCCCCCCHHHHHHHHhccCCCCCCCCCChhHhhcchHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhCCCccchhhH
Q 021674           80 SSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLF  159 (309)
Q Consensus        80 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~wlp~~l~~~~g~s~~~~g~~  159 (309)
                      +.|+.+++.+  +         ++++.    .++ ..+++++...+..++.....+++.+|+|.|+++.+|+|+.+++.+
T Consensus       183 ~~p~~~~~~~--~---------~~~~~----~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~  246 (394)
T PRK03699        183 EFPALGKHAP--K---------ADKPV----AKE-KWGIGVLFLAIAALLYILAQLTFISWVPEYAQKKFGMSLEDAGNL  246 (394)
T ss_pred             CCccccccCc--c---------ccCcc----ccc-cCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHhhHH
Confidence            2222111000  0         00000    011 124566766666677767788899999999999999999999999


Q ss_pred             hhhhHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHhhHHHHHHHHHhhccCchH-HHHHHHHHHHhhhhhhhcchh
Q 021674          160 CVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSPA-MAVLCMACSQGTDAFSQSGLY  238 (309)
Q Consensus       160 ~~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~  238 (309)
                      .+...++..++.++.|+++||+++|+..        ..... ............++.. .....+..+++.+.. .+...
T Consensus       247 ~~~~~~~~~ig~~~~g~l~dr~~~~~~l--------~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~-~~~~~  316 (394)
T PRK03699        247 VSNFWMAYMVGMWIFSFIVRFFDLQRIL--------TVLAG-LALVLMYLFVNTDDPSHLLYAILGLGFFSSAI-YTTII  316 (394)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhchhhHH--------HHHHH-HHHHHHHHHHHcCCchHHHHHHHHHHHHHHHH-HHHHH
Confidence            9999999999999999999999876421        11111 1111111111222332 222222233222111 11122


Q ss_pred             hhhhccCCCchHHHHHHHhHhHhhhhhHHHhHHHhhcccCCchHHHHHHHHHHHHHHHH
Q 021674          239 SNHQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSWDDVFKVSVGLYLVGTAV  297 (309)
Q Consensus       239 ~~~~~~~~~~~g~a~~~~~~~~~lgg~i~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~  297 (309)
                      +...+..|+.++...+..+..+++|+.++|.+.|++.|..++...+++.+++++++.+.
T Consensus       317 ~~~~~~~~~~~~~~~g~~~~~~~~g~~i~p~~~G~l~~~~g~~~~~~~~~~~~~~~~~~  375 (394)
T PRK03699        317 TLGSQQTKVASPKLVNFILTCGTIGTMLTFVVTSPIVAHFGLQAALLTANGLYAVVFVM  375 (394)
T ss_pred             HHHHHHccCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHHhCchhhhhhhHHHHHHHHHH
Confidence            22233345555667788888999999999999999999878888888777777666443

>TIGR00899 2A0120 sugar efflux transporter

Probab=99.93  E-value=1.3e-23  Score=191.09  Aligned_cols=271  Identities=15%  Similarity=0.094  Sum_probs=180.7

Q ss_pred             CcccccchhhHHHHHhccCCCcchhHH--HHHHHhhhhhHHHHhhhhHHHHhhhcCCcchhHhhhhHHHHHHHHHHhhcc
Q 021674            2 GIGEGVAMPAMNNILSKWVPVAERSRS--LALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVWLSKAH   79 (309)
Q Consensus         2 Gig~g~~~p~~~~~i~~~~p~~~rg~~--~g~~~~~~~~g~~lg~~l~~~l~~~~gWr~~F~i~~~~~~v~~~~~~~~~~   79 (309)
                      |.+.+...|...++..|+.|+++|++.  .+....+.++|.++|+++++++.+++|||+.|++.+++.++.....++..|
T Consensus        98 g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ig~~~~~~l~~~~~~~~~f~~~~~~~~~~~~~~~~~~~  177 (375)
T TIGR00899        98 SSFASTANPQLFALAREHADRTGREAVMFSSVMRAQISLAWVIGPPLAFWLALGFGFTVMFLTAALAFVLCGVLVWLFLP  177 (375)
T ss_pred             HhhhhhhHHHHHHHHHHHhhhcchhhHHHHHHHHHHHhHHHHHhhhHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHhCC
Confidence            445667788888999999998888765  688888899999999999999999999999999987766554433333345


Q ss_pred             cCCCCCCCCCHHHHHHHHhccCCCCCCCCCChhHhhcchHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhCCCccchhhH
Q 021674           80 SSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLF  159 (309)
Q Consensus        80 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~wlp~~l~~~~g~s~~~~g~~  159 (309)
                      |+|+++++   ++          +    ..+.++.+|+|+.+......++.........+++|.|+++++|.++.+.+.+
T Consensus       178 ~~~~~~~~---~~----------~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~  240 (375)
T TIGR00899       178 SYPRGAPG---AL----------T----RLEVRGLLASRDTRLLFVACTLMWGCNILYIINMPLLIIHELGLPDKLAGLM  240 (375)
T ss_pred             CcccCccc---cc----------C----cchhhhhhcCcchHHHHHHHHHHHHHHHHHHhhhHHHHHHHcCCCHHHHHHH
Confidence            54432111   00          0    1123346677777765555555444455667889999999999999999988


Q ss_pred             hhhhHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHhhHHHHHHHHHhhccCchHHHHH-HHHHHHhhhhhhhcchh
Q 021674          160 CVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSPAMAVL-CMACSQGTDAFSQSGLY  238 (309)
Q Consensus       160 ~~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~  238 (309)
                      .........++.++.|++.||+++|+..        . ................++.+.... ....+.+.+.. .+...
T Consensus       241 ~~~~~~~~~~~~~~~g~l~~r~g~~~~~--------~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~-~~~~~  310 (375)
T TIGR00899       241 MGTAAGLEIPFMLLAGYLIKRFGKRRLM--------L-LAALAGVAFYTGLAADNSLWALLMLQLLNAIFIGIL-AGIGM  310 (375)
T ss_pred             HHHHHHHHHHHHHhHHHHHHHhcchhHH--------H-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHH
Confidence            8777677778889999999999876421        1 111111111111111122222211 11112222211 11122


Q ss_pred             hhhhccCCCchHHHHHHHhHhHhhhhhHHHhHHHhhcccCCchHHHHHHHHHHHHHHHHHH
Q 021674          239 SNHQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSWDDVFKVSVGLYLVGTAVWN  299 (309)
Q Consensus       239 ~~~~~~~~~~~g~a~~~~~~~~~lgg~i~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~  299 (309)
                      ...+|..|++++.+.++.+...++|+.++|.+.|.+.|..+|+..|.+.+++.+++.+...
T Consensus       311 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~  371 (375)
T TIGR00899       311 LYFQDLMPGRAGAATTLYTNTGRVGWIIAGSVGGILAERWSYHAVYWFAIVMLIVALFCLL  371 (375)
T ss_pred             HHHHHhCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHh
Confidence            2334556777789999999999999999999999999988899999888877777765543

This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.

>PRK10213 nepI ribonucleoside transporter; Reviewed

Probab=99.92  E-value=2.9e-23  Score=190.88  Aligned_cols=265  Identities=16%  Similarity=0.193  Sum_probs=174.6

Q ss_pred             CCcccccchhhHHHHHhccCCCcchhHHHHHHHhhhhhHHHHhhhhHHHHhhhcCCcchhHhhhhHHHHHHHHHHhhccc
Q 021674            1 MGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVWLSKAHS   80 (309)
Q Consensus         1 ~Gig~g~~~p~~~~~i~~~~p~~~rg~~~g~~~~~~~~g~~lg~~l~~~l~~~~gWr~~F~i~~~~~~v~~~~~~~~~~~   80 (309)
                      +|++.|...|...+++.|++|+|||++++++..++.++|..+++++++++.+++|||+.|++.+++.++......+..||
T Consensus       118 ~G~~~g~~~~~~~~~i~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~l~~~~~l~~~~~~p~  197 (394)
T PRK10213        118 LGLALGGFWAMSASLTMRLVPPRTVPKALSVIFGAVSIALVIAAPLGSFLGELIGWRNVFNAAAVMGVLCIFWIIKSLPS  197 (394)
T ss_pred             HHHhhHHHHHHHHHHHHHHcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHCCC
Confidence            47888899999999999999999999999999999999999999999999999999999998877666543333333343


Q ss_pred             CCCCCCCCCHHHHHHHHhccCCCCCCCCCChhHhhcchHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhCCCccchhhHh
Q 021674           81 SPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFC  160 (309)
Q Consensus        81 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~wlp~~l~~~~g~s~~~~g~~~  160 (309)
                      +|++++               ++    ..+.++++|+|++|......++.....++..+|+|+++.+++|+++.+.+...
T Consensus       198 ~~~~~~---------------~~----~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~g~~~  258 (394)
T PRK10213        198 LPGEPS---------------HQ----KQNTFRLLQRPGVMAGMIAIFMSFAGQFAFFTYIRPVYMNLAGFGVDGLTLVL  258 (394)
T ss_pred             CCcccc---------------cc----hhHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhHHHHHH
Confidence            221110               00    11234678999988876666666667777888886666677899999999988


Q ss_pred             hhhHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHhhHHHHHHHHHhhccCchHHHH-HHHHHHHhhhhhhhcchhh
Q 021674          161 VLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSPAMAV-LCMACSQGTDAFSQSGLYS  239 (309)
Q Consensus       161 ~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~  239 (309)
                      ....++..+++.+.+++.||.+++         .............+......++++... .....+++.... ......
T Consensus       259 ~~~~~~~iig~~~~~~l~~r~~~~---------~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~G~~~~~~-~~~~~~  328 (394)
T PRK10213        259 LSFGIASFVGTSLSSFILKRSVKL---------ALAGAPLVLAVSALVLTLWGSDKIVATGVAIIWGLTFALV-PVGWST  328 (394)
T ss_pred             HHHHHHHHHHHHHHHHHHhccchh---------HHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHhh-hHHHHH
Confidence            888888899998888888884322         111111111111111111112222221 222222222211 111221


Q ss_pred             hhhccCCCchHHHHHHHhHhHhhhhhHHHhHHHhhcccCCchHHHHHHHHHHHHH
Q 021674          240 NHQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSWDDVFKVSVGLYLVG  294 (309)
Q Consensus       240 ~~~~~~~~~~g~a~~~~~~~~~lgg~i~~~~~g~l~~~~~~~~~~~~~~~~~~~~  294 (309)
                      ..++..|++.+.+.+......++|..+||.+.|.+.|+.++...+...+.+.++.
T Consensus       329 ~~~~~~~~~~~~~~~~~~~~~~lg~~~G~~l~G~l~~~~g~~~~~~~~~~~~~~~  383 (394)
T PRK10213        329 WITRSLADQAEKAGSIQVAVIQLANTCGAAIGGYALDNIGLTSPLMLSGTLMLLT  383 (394)
T ss_pred             HHHHHCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHhccChhhHHHHHHHHHHHH
Confidence            2222335555666666677788999999999999999877777776655444433

>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional

Probab=99.92  E-value=1.8e-23  Score=192.64  Aligned_cols=273  Identities=20%  Similarity=0.228  Sum_probs=177.6

Q ss_pred             CCcccccchhhHHHHHhccCCCcchhHHHHHHHhhhhhHHHHhhhhHHHHhhhcCCcchhHhhhhHHHHHHHHHHhhccc
Q 021674            1 MGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVWLSKAHS   80 (309)
Q Consensus         1 ~Gig~g~~~p~~~~~i~~~~p~~~rg~~~g~~~~~~~~g~~lg~~l~~~l~~~~gWr~~F~i~~~~~~v~~~~~~~~~~~   80 (309)
                      +|++.+...|...+++.|++|+|+|++++++.+.+.++|..+++.++..+.+..+||+.|++.+++.++.........+|
T Consensus       113 ~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  192 (406)
T PRK11551        113 TGVGLGGALPNLIALTSEAVGPRLRGTAVSLMYCGVPFGGALASVIGVLAAGDAAWRHIFYVGGVGPLLLVPLLMRWLPE  192 (406)
T ss_pred             HHhhHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccCHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence            47888889999999999999999999999999999999999999999999899999999998776555443333333455


Q ss_pred             CCCCCCCCCHHHHHHHHhccCCCCCCCCCChhHhhcc---hHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhCCCccchh
Q 021674           81 SPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSK---PPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESG  157 (309)
Q Consensus        81 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~---~~~~~~~~~~~~~~~~~~~~~~wlp~~l~~~~g~s~~~~g  157 (309)
                      +|+.+++.+++           +++  +...+.++|+   +..+......++.....+...+|+|.|+++ +|++..+.+
T Consensus       193 ~~~~~~~~~~~-----------~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~-~g~s~~~~~  258 (406)
T PRK11551        193 SRAFAQAAGAG-----------KQR--APVLRALFGEGRATATLLLWISYFFTLIVLYFLLNWLPSLLVG-QGLSRSQAG  258 (406)
T ss_pred             ChhHHhccCcc-----------hhh--hhhHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CCCChhhhh
Confidence            43221100000           000  0011222222   233334444455555677888999999986 699999999


Q ss_pred             hHhhhhHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHhhHHHHHHHHHhhccCchHHHH-HHHHHHHhhhhhhhcc
Q 021674          158 LFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSPAMAV-LCMACSQGTDAFSQSG  236 (309)
Q Consensus       158 ~~~~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~  236 (309)
                      .......++..++.++.|+++||+++|+.        +. ...+............++..... .....+++... ..+.
T Consensus       259 ~~~~~~~~~~~~~~~~~g~l~dr~g~~~~--------~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~-~~~~  328 (406)
T PRK11551        259 LVQIAFNIGGALGSLLIGALMDRLRPRRV--------VL-LIYAGILASLAALAAAPSFAGMLLAGFAAGLFVVG-GQSV  328 (406)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhHHHH--------HH-HHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHh-HHHH
Confidence            99999999999999999999999987631        11 11111111111111222332221 11222221111 1122


Q ss_pred             hhhhh-hccCCCchHHHHHHHhHhHhhhhhHHHhHHHhhccc-CCchHHHHHHHHHHHHHHHH
Q 021674          237 LYSNH-QDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQH-GSWDDVFKVSVGLYLVGTAV  297 (309)
Q Consensus       237 ~~~~~-~~~~~~~~g~a~~~~~~~~~lgg~i~~~~~g~l~~~-~~~~~~~~~~~~~~~~~~~~  297 (309)
                      .+... +..++++++.+.|+.+...++++.++|.+.|.+.|+ +++...+.....+.+++.+.
T Consensus       329 ~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~  391 (406)
T PRK11551        329 LYALAPLFYPTQVRGTGVGAAVAVGRLGSMAGPLLAGQLLALGRSTVGVIGASIPVILVAALA  391 (406)
T ss_pred             HHHHHHHHcchhhhhhhhhHHHHhhhHHHHHHhhhHhhhhccCCchHHHHHHHHHHHHHHHHH
Confidence            22222 334667899999999999999999999999999998 45666666665555555433

>PRK10091 MFS transport protein AraJ; Provisional

Probab=99.92  E-value=1.5e-23  Score=191.93  Aligned_cols=267  Identities=16%  Similarity=0.206  Sum_probs=176.7

Q ss_pred             CCcccccchhhHHHHHhccCCCcchhHHHHHHHhhhhhHHHHhhhhHHHHhhhcCCcchhHhhhhHHHHHHHHHHhhccc
Q 021674            1 MGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVWLSKAHS   80 (309)
Q Consensus         1 ~Gig~g~~~p~~~~~i~~~~p~~~rg~~~g~~~~~~~~g~~lg~~l~~~l~~~~gWr~~F~i~~~~~~v~~~~~~~~~~~   80 (309)
                      +|+++|...|....++.|++|++||++++++...+..+|..+++++++++.+.+|||++|++.+++.++..+......||
T Consensus       101 ~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~lp~  180 (382)
T PRK10091        101 SGFPHGAFFGVGAIVLSKIIKPGKVTAAVAGMVSGMTVANLLGIPLGTYLSQEFSWRYTFLLIAVFNIAVLASIYFWVPD  180 (382)
T ss_pred             HHhhhHHHHHHHHHHHHHhCChHHhhHHHHHHHHHHHHHHHHhccHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence            47888888898899999999999999999999999999999999999999999999999999887766544333333444


Q ss_pred             CCCCCCCCCHHHHHHHHhccCCCCCCCCCChhHhhcchHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhCCCccchhhHh
Q 021674           81 SPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFC  160 (309)
Q Consensus        81 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~wlp~~l~~~~g~s~~~~g~~~  160 (309)
                      .++++ +  .+.               +.+ .+.+|+++.|......++.+.+.+...+++|+|+++.+|+|+.+.+++.
T Consensus       181 ~~~~~-~--~~~---------------~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~  241 (382)
T PRK10091        181 IRDEA-K--GGL---------------REQ-FHFLRSPAPWLIFAATMFGNAGVFAWFSYIKPYMMFISGFSETSMTFIM  241 (382)
T ss_pred             CCccc-c--cCH---------------HHH-HHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHH
Confidence            32111 0  000               001 2356788777766555555566667778889999988999999999999


Q ss_pred             hhhHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHhhHHHHHHHHHhhccCchHH-HHHHHHHHHhhhhhhhcchhh
Q 021674          161 VLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSPAM-AVLCMACSQGTDAFSQSGLYS  239 (309)
Q Consensus       161 ~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~  239 (309)
                      .+..++..++.++.|+++||+++|+...       ............... ..+.... .+.....+.+..... .....
T Consensus       242 ~~~~~~~~ig~~~~g~l~~r~~~~~~~~-------~~~~~~~i~~~~~~~-~~~~~~~~~~~~~~~~~g~~~~~-~~~~~  312 (382)
T PRK10091        242 MLVGLGMVLGNLLSGRLSGRYSPLRIAA-------VTDFIIVLALLMLFF-FGGMKTASLIFAFICCAGLFALS-APLQI  312 (382)
T ss_pred             HHHHHHHHHHhHHHheeccccCchhHHH-------HHHHHHHHHHHHHHH-HHhhHHHHHHHHHHHHHHHHhhh-HHHHH
Confidence            9999999999999999999998663211       111111111111111 1122222 222222222221111 11111


Q ss_pred             -hhhcc-CCCchHHHHHHHhHhHhhhhhHHHhHHHhhccc-CCchHHHHHHHHHHHHHHHH
Q 021674          240 -NHQDI-APRYSGVLLGLSNTAGVLAGVFGTAATGYILQH-GSWDDVFKVSVGLYLVGTAV  297 (309)
Q Consensus       240 -~~~~~-~~~~~g~a~~~~~~~~~lgg~i~~~~~g~l~~~-~~~~~~~~~~~~~~~~~~~~  297 (309)
                       ..++. +++..+.+.  .+...++|+++||.+.|.+.|+ .+|+..+.+.+.+.++....
T Consensus       313 ~~~~~~~~~~~~~~~~--~~~~~~~g~~~Gp~~~G~l~~~~~~~~~~~~~~~~~~~~~~~~  371 (382)
T PRK10091        313 LLLQNAKGGELLGAAG--GQIAFNLGSAIGAYCGGMMLTLGLAYNYVALPAALLSFAAMSS  371 (382)
T ss_pred             HHHHhCCcchHHHHHH--HHHHHHHHHHHHHHHhHHHHHcccCcchHHHHHHHHHHHHHHH
Confidence             11222 334455443  4677899999999999999996 68998888876665555433

>TIGR00890 2A0111 Oxalate/Formate Antiporter

Probab=99.92  E-value=8.9e-24  Score=191.52  Aligned_cols=273  Identities=18%  Similarity=0.151  Sum_probs=181.8

Q ss_pred             CCcccccchhhHHHHHhccCCCcchhHHHHHHHhhhhhHHHHhhhhHHHHhhhcCCcchhHhhhhHHHHHHHHHHhhccc
Q 021674            1 MGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVWLSKAHS   80 (309)
Q Consensus         1 ~Gig~g~~~p~~~~~i~~~~p~~~rg~~~g~~~~~~~~g~~lg~~l~~~l~~~~gWr~~F~i~~~~~~v~~~~~~~~~~~   80 (309)
                      +|+++|...+.....+.+|+| |||+++.++...+.++|..+++++.+.+.+..|||+.|++.+++.++.....+...++
T Consensus       101 ~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~  179 (377)
T TIGR00890       101 ASAGVGIAYGIALNTAVKWFP-DKRGLASGIIIGGYGLGSFILSPLITSVINLEGVPAAFIYMGIIFLLVIVLGAFLIGY  179 (377)
T ss_pred             HhHHHHHHHHhHHHHHHHHcC-cccHHHHHHHHHhcchhHhHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHheec
Confidence            478888888888999999998 6799999999999999999988888888888999999999888776654444333333


Q ss_pred             CCCCCCCCCHHHHHHHHhccCCCCCCCCCChhHhhcchHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhCCCccchhhHh
Q 021674           81 SPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFC  160 (309)
Q Consensus        81 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~wlp~~l~~~~g~s~~~~g~~~  160 (309)
                      +|+++++ +++           +.+.++.+.++.+|+|+.|......++..........+.|.|.+ ++|.+..+.+.+.
T Consensus       180 ~~~~~~~-~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~  246 (377)
T TIGR00890       180 PPGQLIK-TNI-----------EVSVKDYTVWEMLRTPQFWVLYLSFFLNAVSGLLLIGLYKPYGQ-SLGLSDGFLVLAV  246 (377)
T ss_pred             Cchhccc-cCc-----------ccchhhhhHHHHHcCccHHHHHHHHHHHhHHHHHHHHHHHHHHH-HcCCCHHHHHHHH
Confidence            2221110 000           00001123467889998887776666665555666677888865 4789888899999


Q ss_pred             hhhHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHhhHHHHHHHHHhhccCchHHH-HHHHHHHHhhhhhhhcchhh
Q 021674          161 VLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSPAMA-VLCMACSQGTDAFSQSGLYS  239 (309)
Q Consensus       161 ~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~  239 (309)
                      ....++..++.++.|+++||++||+....       ....................... ......+.+.+.. ......
T Consensus       247 ~~~~~~~~~~~~~~g~l~dr~g~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~-~~~~~~  318 (377)
T TIGR00890       247 SISSIFNGGGRPFLGALSDKIGRQKTMSI-------VFGISAVGMAAMLFIPMLNDVLFLATVALVFFTWGGT-ISLFPS  318 (377)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhhhhhhhH-------HHHHHHHHHHHHHHcccchhHHHHHHHHHHHHHhccc-hhccHH
Confidence            99999999999999999999987642211       11111111111111111111111 1111122211111 111111


Q ss_pred             hhh-ccCCCchHHHHHHHhHhHhhhhhHHHhHHHhhcccCCchHHHHHHHHHHHHHH
Q 021674          240 NHQ-DIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSWDDVFKVSVGLYLVGT  295 (309)
Q Consensus       240 ~~~-~~~~~~~g~a~~~~~~~~~lgg~i~~~~~g~l~~~~~~~~~~~~~~~~~~~~~  295 (309)
                      ... ..++++++.+.|+.+...++|+.++|.+.|.+.|+.+|+..|.+.+++.+++.
T Consensus       319 ~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~f~~~~~~~~~~~  375 (377)
T TIGR00890       319 LVSDIFGPANSAANYGFLYTAKAVAGIFGGLIASHALTEIGFEYTFIVTGAFALTSL  375 (377)
T ss_pred             HHHHHhhhhhhhhHhHHHHHHHHHHHHHHHHHHHHHHhhhchhhHHHHHHHHHHHhc
Confidence            222 34567899999999999999999999999999999889999988777766554

>TIGR00881 2A0104 phosphoglycerate transporter family protein

Probab=99.92  E-value=1.8e-24  Score=196.28  Aligned_cols=278  Identities=17%  Similarity=0.187  Sum_probs=181.5

Q ss_pred             CCcccccchhhHHHHHhccCCCcchhHHHHHHHhhhhhHHHHhh-hhHHHHhhhcCCcchhHhhhhHHHHHHHHHHhhcc
Q 021674            1 MGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGL-AFSPFLIHRFGWPSVFYSFGSLGTVWFTVWLSKAH   79 (309)
Q Consensus         1 ~Gig~g~~~p~~~~~i~~~~p~~~rg~~~g~~~~~~~~g~~lg~-~l~~~l~~~~gWr~~F~i~~~~~~v~~~~~~~~~~   79 (309)
                      +|++.+...|...++++|++|+|||++++++.+.+.++|..+++ .++..+.++.+||+.|++.+.+.++..+......+
T Consensus        93 ~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  172 (379)
T TIGR00881        93 NGIFQGMGWPPCGRTVTKWFSRSERGTWVSFWNCSHNVGGGLLPPLVLFGIAELYSWHWVFIVPGIIAIIVSLICFLLLR  172 (379)
T ss_pred             HHhhccccCCchHHHHHHhcCHhhheeeEeehhccchhHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHheeeC
Confidence            47888999999999999999999999999999999999999999 47777778899999999888776654444444445


Q ss_pred             cCCCCCCCCCHHHH-HHHHhc---cCCCC-CCCCCChhHhhcchHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhCCCcc
Q 021674           80 SSPAEDPQLRPAEK-KLIVSS---CASKE-PVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLT  154 (309)
Q Consensus        80 ~~p~~~~~~~~~~~-~~~~~~---~~~~~-~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~wlp~~l~~~~g~s~~  154 (309)
                      |+|++++..++++. ....++   +.+++ ...+..+++++|+|.+|...+..++.....+.+.+|+|.|+++.+|++..
T Consensus       173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~  252 (379)
T TIGR00881       173 DSPQSCGLPPAEEMPNEEPDGDAEKKEEELTKKQIFLQYVLLNKVLWYISLGYVFVYVVRTGILDWSPLYLTQEKGFSKE  252 (379)
T ss_pred             CCccccccCccccCcccccccccccccccccchHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHH
Confidence            44432211000000 000000   00000 01112245678999999888888887778888999999999999999999


Q ss_pred             chhhHhhhhHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHhhHHHHHHHHHhhccCchHHH-HHHHHHHHhhhhhh
Q 021674          155 ESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSPAMA-VLCMACSQGTDAFS  233 (309)
Q Consensus       155 ~~g~~~~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~  233 (309)
                      +.+.......++..++.++.|+++||..+|++....    ....................+.... ......+...... 
T Consensus       253 ~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~-  327 (379)
T TIGR00881       253 KASWAFTLYELGGLVGTLLAGWLSDKLFNGRRGPLA----VFFMALIIVSLLVYWLNPAANPLMDLICLFALGFLVYGP-  327 (379)
T ss_pred             HHHHHHHHHHHHcchhHHHHHHHHHHHcCCcchHHH----HHHHHHHHHHHHHHhcCcchhHHHHHHHHHHHHHHHhhh-
Confidence            999999999999999999999999997554322110    0111111111111111111122222 1112222111111 


Q ss_pred             hcchhhhh-hccCCCchHHHHHHHhHhHhhhhhHHHhHHHhhcccCCchHH
Q 021674          234 QSGLYSNH-QDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSWDDV  283 (309)
Q Consensus       234 ~~~~~~~~-~~~~~~~~g~a~~~~~~~~~lgg~i~~~~~g~l~~~~~~~~~  283 (309)
                      ........ +..+++.++.+.++.|...++++.++|.+.|.+.|+.+|+..
T Consensus       328 ~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~  378 (379)
T TIGR00881       328 QMLIGVIASELAPKKAAGTAAGFVGFFAYLGGILAGLPLGYLADGFGWAGA  378 (379)
T ss_pred             hHHHHHHHHHhcCcchhHHHHHHHHHhhhhhhhhhhhhHHHHHHhhccccc
Confidence            11111122 234567899999999999999999999999999998777653

>PRK11010 ampG muropeptide transporter; Validated

Probab=99.92  E-value=4.8e-23  Score=194.44  Aligned_cols=280  Identities=14%  Similarity=0.168  Sum_probs=184.5

Q ss_pred             CcccccchhhHHHHHhccCCCcchhHHHHHHHhhhhhHHHHhhhhHHHHhh-hcCCcchhHhhhhHHHHHHHHHHhhccc
Q 021674            2 GIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIH-RFGWPSVFYSFGSLGTVWFTVWLSKAHS   80 (309)
Q Consensus         2 Gig~g~~~p~~~~~i~~~~p~~~rg~~~g~~~~~~~~g~~lg~~l~~~l~~-~~gWr~~F~i~~~~~~v~~~~~~~~~~~   80 (309)
                      |++.+...+...+++.||+|+|||+++.++...+..+|.++++.++.++.+ .+|||..|++.+++.++..+..+ ..+|
T Consensus       118 ~~~~a~~~i~~~a~~~~~~~~~~rg~~~~i~~~g~~lG~llg~~l~~~l~~~~~GWr~~f~i~a~l~ll~~l~~~-~~~e  196 (491)
T PRK11010        118 AFCSASQDIVFDAWKTDVLPAEERGAGAAISVLGYRLAMLVSGGLALWLADRYLGWQGMYWLMAALLIPCIIATL-LAPE  196 (491)
T ss_pred             HHHHHHHHHHHHHHHHHhcChhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCHHHHHHHHHHHHHHHHHHHH-hcCC
Confidence            344556667788899999999999999999999999999999999999999 57999999998877665433322 2444


Q ss_pred             CCCCCCCCCHHHHHHHHhccCCCCCCCCCChhHhhcchHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhCCCccchhhHh
Q 021674           81 SPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFC  160 (309)
Q Consensus        81 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~wlp~~l~~~~g~s~~~~g~~~  160 (309)
                      +++++++   +++.        +++ ...++++++++++.|......++.....+...+|.|+|+.+++|+|..+.+.+.
T Consensus       197 ~~~~~~~---~~~~--------~~~-~~~~l~~~~~~~~~~~~ll~~~l~~~~~~~~~~~~~~~l~~~~G~s~~~~g~~~  264 (491)
T PRK11010        197 PTDTIPV---PKTL--------EQA-VVAPLRDFFGRNNAWLILLLIVLYKLGDAFAMSLTTTFLIRGVGFDAGEVGLVN  264 (491)
T ss_pred             Ccccccc---ccch--------hhh-HHHHHHHHHcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHH
Confidence            3221100   0000        000 012456778888877766666666666777788999999888999999999987


Q ss_pred             -hhhHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHH-HhhHHHHHHHHHhhcc-CchHHHHHHHHHHHhhhhhhhcch
Q 021674          161 -VLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQS-IGFLGPAFFLTQLSHV-DSPAMAVLCMACSQGTDAFSQSGL  237 (309)
Q Consensus       161 -~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~  237 (309)
                       ....++..++.+++|+++||+++|+.       .+.. +......+........ ++.........+......+.....
T Consensus       265 ~~~g~i~~iiG~ll~G~L~dr~g~~~~-------l~i~~~l~~l~~l~~~~l~~~~~~~~~l~~~~~l~~~~~g~~~~~~  337 (491)
T PRK11010        265 KTLGLLATIVGALYGGILMQRLSLFRA-------LMIFGILQGVSNAGYWLLSITDKNLYSMGAAVFFENLCGGMGTAAF  337 (491)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhHHHH-------HHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHHHH
Confidence             45567999999999999999997631       1111 1101111111111111 222221111111000011111112


Q ss_pred             hhhhhc-cCCCchHHHHHHHhHhHhhhhhHHHhHHHhhcccCCchHHHHHHHHHHHHHHHHHHhh
Q 021674          238 YSNHQD-IAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSWDDVFKVSVGLYLVGTAVWNLF  301 (309)
Q Consensus       238 ~~~~~~-~~~~~~g~a~~~~~~~~~lgg~i~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~  301 (309)
                      ++...+ .+++..++..++.|...++|+.+++.+.|.+.|..||...|.+.+++.+.+.+.....
T Consensus       338 ~a~~~~l~~~~~~~t~~gl~~s~~~lg~~~~~~~~G~l~~~~G~~~~f~~~~~~~l~~l~~~~~~  402 (491)
T PRK11010        338 VALLMTLCNKSFSATQFALLSALSAVGRVYVGPVAGWFVEAHGWPTFYLFSVAAAVPGLLLLLVC  402 (491)
T ss_pred             HHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHH
Confidence            222223 3445788899999999999999999999999998889999988888888776665544

>PRK15402 multidrug efflux system translocase MdfA; Provisional

Probab=99.92  E-value=1.4e-22  Score=186.90  Aligned_cols=288  Identities=13%  Similarity=0.045  Sum_probs=183.6

Q ss_pred             CCcccccchhhHHHHHhccCCCcchhHHHHHHHhhhhhHHHHhhhhHHHHhhhcCCcchhHhhhhHHHHHHHHHHhhccc
Q 021674            1 MGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVWLSKAHS   80 (309)
Q Consensus         1 ~Gig~g~~~p~~~~~i~~~~p~~~rg~~~g~~~~~~~~g~~lg~~l~~~l~~~~gWr~~F~i~~~~~~v~~~~~~~~~~~   80 (309)
                      +|++.+...|....++.|++|+++|++..++......+|..+++.+++++.++.|||+.|++.+++.++.....+...||
T Consensus       111 ~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~  190 (406)
T PRK15402        111 QGIGLCFIGAVGYAAIQESFEEADAIKITALMANVALLAPLLGPLVGAALIHVLPWRGMFVLFAALAALSFFGLWRAMPE  190 (406)
T ss_pred             HHhHhhhHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCccHHHHHHHHHHHHHHHHHHHhCCC
Confidence            46777888889999999999999999999999998899999999999999999999999998887776554433333444


Q ss_pred             CCCCCCCCCHHHHHHHHhccCCCCCCCCCChhHhhcchHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhCCCccchhhHh
Q 021674           81 SPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFC  160 (309)
Q Consensus        81 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~wlp~~l~~~~g~s~~~~g~~~  160 (309)
                      +++++++ +.+.++          .  ..++++++|||+++......++.....+...++.|.|+++++|+++.+.++..
T Consensus       191 ~~~~~~~-~~~~~~----------~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~~~~~~g~~~  257 (406)
T PRK15402        191 TAGRVGE-KLSLKE----------L--GRDYKLVLKNRRFVAGALALGLVSLPLLAWIALSPVILISGEQLSSYEYGLLQ  257 (406)
T ss_pred             CCccccc-cccHHH----------H--HHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCCHHHHHHHH
Confidence            3221110 000000          0  11346788999988877666666666667778899999999999999999888


Q ss_pred             hhhHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHhhHHHHHHHHHh--hccCchHHHH-HHHHHHHhhhhhhhcch
Q 021674          161 VLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQL--SHVDSPAMAV-LCMACSQGTDAFSQSGL  237 (309)
Q Consensus       161 ~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~-~~~~~~~~~~~~~~~~~  237 (309)
                      ....++..++.++.|+++||+++|+...      ................  ....+..+.. .....+.+.+.. .+..
T Consensus       258 ~~~~~~~~~g~~~~g~l~~r~~~~~~~~------~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~-~~~~  330 (406)
T PRK15402        258 VPVFGALIAGNLTLARLTSRRPLRSLIR------MGLWPMVAGLLLAALATVISSHAYLWLTAGLSLYAFGIGLA-NAGL  330 (406)
T ss_pred             HHHHHHHHHHHHHHHHHHHhcCHHHHHH------HHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHH-hhhH
Confidence            7777888999999999999998763111      0001011111111111  1112222222 122222222211 1122


Q ss_pred             hhhhhccCCCchHHHHHHHhHhHhhhhhHHHhHHHhhcccCCchHHHHHHHHHHHHHHHHHHhhcCCcccc
Q 021674          238 YSNHQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSWDDVFKVSVGLYLVGTAVWNLFSTGEKVV  308 (309)
Q Consensus       238 ~~~~~~~~~~~~g~a~~~~~~~~~lgg~i~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  308 (309)
                      ........++++|...++.+...+++..+|+.+.+.+.+..++.......+++.++..+....+.+++++.
T Consensus       331 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  401 (406)
T PRK15402        331 YRLTLFSSDVSKGTVSAAMGMLSMLIFTVGIELSKHAYLGGGNGLFNLFNLANGLLWLLLVRIFLKDKPMG  401 (406)
T ss_pred             HHHHhhhccccccHHHHHHHHHHHHHHHHHHHHHHhcccCCchHHHHHHHHHHHHHHHHHHHHHhccCCCc
Confidence            22222334578999999999999999999999999998885544333333333333333334444444443

>PRK15075 citrate-proton symporter; Provisional

Probab=99.92  E-value=6.3e-23  Score=190.97  Aligned_cols=259  Identities=12%  Similarity=0.137  Sum_probs=158.3

Q ss_pred             CCcccccchhhHHHHHhccCCCcchhHHHHHHHhhhhhHHHHhhhhHHHHh--------hhcCCcchhHhhhhHHHHHHH
Q 021674            1 MGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLI--------HRFGWPSVFYSFGSLGTVWFT   72 (309)
Q Consensus         1 ~Gig~g~~~p~~~~~i~~~~p~~~rg~~~g~~~~~~~~g~~lg~~l~~~l~--------~~~gWr~~F~i~~~~~~v~~~   72 (309)
                      ||+++|...|+...+++||+|+|+|++++++...+.++|..+++.+++.+.        +++|||+.|++..... +. .
T Consensus       127 ~G~~~g~~~~~~~~~~~e~~p~~~rg~~~~~~~~~~~~g~~~g~~~g~~l~~~~~~~~~~~~gWr~~f~~~~~~~-~~-~  204 (434)
T PRK15075        127 QGFSAGVELGGVSVYLAEIATPGRKGFYTSWQSASQQVAVVFAALLGYLLNQWLSPAQMAEWGWRIPFLIGCLIV-PF-I  204 (434)
T ss_pred             hhccccccHHHHHHHHHhhCCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHhccchHHHHHHHHHHH-HH-H
Confidence            689999999999999999999999999999999999998888888877763        5789999999743322 21 1


Q ss_pred             HHHhhcccCCCCCCCCCHHHHHHHHhccCCCCCCCCCChhHhhcchHHHHH-HHHHHHHHHHHHHHHHhHHHHHHHHhCC
Q 021674           73 VWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWAL-IVSHFCHNWGTFILLTWMPTYYNQVLHF  151 (309)
Q Consensus        73 ~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~wlp~~l~~~~g~  151 (309)
                      .+.+.   .++|+++   .+++   +    +++..+..++.+.|+++.+.. ....++.....+...+|+|.|+++++|+
T Consensus       205 ~~~~~---~~~e~~~---~~~~---~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~  271 (434)
T PRK15075        205 FLIRR---SLEETEE---FLAR---K----HRPSMREIFRSLAANWRIVLAGMLMVAMTTVSFYLITVYTPTFGKTVLHL  271 (434)
T ss_pred             HHHHH---hcCCCHH---HHHh---h----hccccccHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence            22221   1222110   0000   0    000001123444566655543 3333445566788899999999998999


Q ss_pred             CccchhhHhhhhHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHhhHHHHHHHHHhhccCchHHH-HHHHHHHHhhh
Q 021674          152 NLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSPAMA-VLCMACSQGTD  230 (309)
Q Consensus       152 s~~~~g~~~~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~  230 (309)
                      +..+.+++..+..++..++.+++|+++||++||+....     ...................++.... ......+.+.+
T Consensus       272 ~~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g  346 (434)
T PRK15075        272 SAADSLLVTLCVGVSNFIWLPIGGALSDRIGRRPVLIA-----FTVLAILTAYPALSWLVAAPSFARMLAVELWLSFLYG  346 (434)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHH-----HHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHH
Confidence            99999998888889999999999999999987632110     0001000000001111111222111 11111222221


Q ss_pred             hhhhcchhhhhhc-cCCCchHHHHHHHhHhHhh-hhhHHHhHHHhhcccCCc
Q 021674          231 AFSQSGLYSNHQD-IAPRYSGVLLGLSNTAGVL-AGVFGTAATGYILQHGSW  280 (309)
Q Consensus       231 ~~~~~~~~~~~~~-~~~~~~g~a~~~~~~~~~l-gg~i~~~~~g~l~~~~~~  280 (309)
                      .. .+.......| .+++.++++.++.+..++. ++.++|.+.|++.|+.++
T Consensus       347 ~~-~~~~~~~~~e~~p~~~rg~~~g~~~~~~~~~~g~~~p~~~g~i~~~~g~  397 (434)
T PRK15075        347 SY-NGAMVVALTEVMPAEVRTAGFSLAYSLATAIFGGFTPAISTWLIHVTGD  397 (434)
T ss_pred             HH-HhhHHHHHHHHCCCCccchheeHHHHHHHHHHhhhHHHHHHHHHHhcCC
Confidence            11 1112222223 4567899999987665654 588999999999998554

>PRK15011 sugar efflux transporter B; Provisional

Probab=99.92  E-value=7.5e-23  Score=188.03  Aligned_cols=267  Identities=15%  Similarity=0.078  Sum_probs=171.6

Q ss_pred             ccchhhHHHHHhccCCCcch--hHHHHHHHhhhhhHHHHhhhhHHHHhhhcCCcchhHhhhhHHHHHHHHHHhhcccCCC
Q 021674            6 GVAMPAMNNILSKWVPVAER--SRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVWLSKAHSSPA   83 (309)
Q Consensus         6 g~~~p~~~~~i~~~~p~~~r--g~~~g~~~~~~~~g~~lg~~l~~~l~~~~gWr~~F~i~~~~~~v~~~~~~~~~~~~p~   83 (309)
                      +...|...+++.++.|+++|  ++..++.+++.++|.++|+++++++.+++|||..|++.+++.++..+......||+++
T Consensus       120 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~g~~i~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~  199 (393)
T PRK15011        120 STANPQMFALAREHADKTGREAVMFSSFLRAQVSLAWVIGPPLAYALAMGFSFTVMYLSAAVAFIVCGVMVWLFLPSMRK  199 (393)
T ss_pred             HhhHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHHHHhhHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHhhcCccCC
Confidence            45677788888888887766  4667899999999999999999999999999999998887776654444444555443


Q ss_pred             CCCCCCHHHHHHHHhccCCCCCCCCCChhHhhcc-hHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhCCCccchhhHhhh
Q 021674           84 EDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSK-PPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVL  162 (309)
Q Consensus        84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~wlp~~l~~~~g~s~~~~g~~~~~  162 (309)
                      ++++. ++          +.+        ...++ +..+......++.....+.+..|+|.|+++++|+++.+.+.+...
T Consensus       200 ~~~~~-~~----------~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~~~~~~~~g~~~~~  260 (393)
T PRK15011        200 ELPLA-TG----------TLE--------APRRNRRDTLLLFVICTLMWGTNSLYIINMPLFIINELHLPEKLAGVMMGT  260 (393)
T ss_pred             CCccc-cc----------ccc--------ccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHH
Confidence            22110 00          000        01112 222333333344434455667899999999999999999988877


Q ss_pred             hHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHhhHHHHHHHHHhhccCchHHHHHHHHH-HHhhhhhhhcchhhhh
Q 021674          163 PWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSPAMAVLCMAC-SQGTDAFSQSGLYSNH  241 (309)
Q Consensus       163 ~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~  241 (309)
                      ..++..++.++.|+++||+++|+.        +. ................+++...+..... +...+.. .+......
T Consensus       261 ~~~~~i~~~~~~G~l~dr~g~~~~--------~~-~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~g~~-~~~~~~~~  330 (393)
T PRK15011        261 AAGLEIPTMLIAGYFAKRLGKRFL--------MR-VAAVAGVCFYAGMLMAHSPAILLGLQLLNAIYIGIL-GGIGMLYF  330 (393)
T ss_pred             HHHHHHHHHHHHHHHHHHhChHHH--------HH-HHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHH-HHHHHHHH
Confidence            777888899999999999987631        11 1111111111111122233322222111 1111111 11112223


Q ss_pred             hccCCCchHHHHHHHhHhHhhhhhHHHhHHHhhcccCCchHHHHHHHHHHHHHHHHHHhh
Q 021674          242 QDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSWDDVFKVSVGLYLVGTAVWNLF  301 (309)
Q Consensus       242 ~~~~~~~~g~a~~~~~~~~~lgg~i~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~  301 (309)
                      +|..|++++.+.++.+...++|+.++|.+.|.+.|+.+|+..|.+.+++.+++.+...+.
T Consensus       331 ~~~~p~~~g~~~~~~~~~~~lg~~~g~~l~G~i~~~~g~~~~~~~~~~~~~~~~~~~~~~  390 (393)
T PRK15011        331 QDLMPGQAGSATTLYTNTSRVGWIIAGSLAGIVAEIWNYHAVFWFALVMIIATLFCLLRI  390 (393)
T ss_pred             HHhCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhh
Confidence            455677799999999999999999999999999998789988887777776666554443

>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily

Probab=99.92  E-value=1.9e-22  Score=183.93  Aligned_cols=261  Identities=15%  Similarity=0.187  Sum_probs=173.7

Q ss_pred             CCcccccchhhHHHHHhccCCCcchhHHHHHHHhhhhhHHHHhhhhHHHHhhhcCCcchhHhhhhHHHHHHHHHHhhccc
Q 021674            1 MGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVWLSKAHS   80 (309)
Q Consensus         1 ~Gig~g~~~p~~~~~i~~~~p~~~rg~~~g~~~~~~~~g~~lg~~l~~~l~~~~gWr~~F~i~~~~~~v~~~~~~~~~~~   80 (309)
                      +|++.+...+...+++.|++|++||+++.++.+...++|..+++.+++.+.+++|||+.|++.+++.++.........+|
T Consensus       103 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  182 (385)
T TIGR00710       103 QAFGASAGSVISQALVRDIYPGEELSRIYSILMPVLALAPAVAPLLGGYILVWLSWHAIFAFLSLAGILLSALIFFILPE  182 (385)
T ss_pred             HHcchhHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence            47888999999999999999999999999999999999999999999999999999999998777666544333333444


Q ss_pred             CCCCCCCCCHHHHHHHHhccCCCCCCCCCChhHhhcchHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhCCCccchhhHh
Q 021674           81 SPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFC  160 (309)
Q Consensus        81 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~wlp~~l~~~~g~s~~~~g~~~  160 (309)
                      +++++++.+.++              ...++++++|||+++...+...+.....+...++.|.++++++|+++.+.+.+.
T Consensus       183 ~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~  248 (385)
T TIGR00710       183 TLPYEARIQIST--------------YFETFLLLLKSKMFWGYALIYGASFGGFFAFFSGAPFVYIDIMGVSPSVFGLLF  248 (385)
T ss_pred             CCCCcccCCHHH--------------HHHHHHHHHcCchhHHHHHHHHHHHHHHHHHHHcChHHHHHHcCCCHHHHHHHH
Confidence            332211100000              011245678899888877766666667788889999999999999999999999


Q ss_pred             hhhHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHhhHHHHHHHHHhhccC-chHHHHH--HHHHHHhhhhhhhcch
Q 021674          161 VLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVD-SPAMAVL--CMACSQGTDAFSQSGL  237 (309)
Q Consensus       161 ~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~--~~~~~~~~~~~~~~~~  237 (309)
                      ....++..++.++.|+++||+++|+....      ................... .......  ....+.+.+.. ....
T Consensus       249 ~~~~~~~~~~~~~~g~l~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~-~~~~  321 (385)
T TIGR00710       249 ALNIIAMIFGGFLNGRFIKKWGAKSLLRM------GLILFAVSAVLLEITAILGLGSWAMIIGPMMFVGIGNSMI-SSIA  321 (385)
T ss_pred             HHHHHHHHHHHHHHHHHHHhcCHHHHHHH------HHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHH-HHHH
Confidence            98999999999999999999987632111      1111111111111111111 1111111  11122222211 1112


Q ss_pred             hhhhhccCCCchHHHHHHHhHhHhhhhhHHHhHHHhhcccCCchH
Q 021674          238 YSNHQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSWDD  282 (309)
Q Consensus       238 ~~~~~~~~~~~~g~a~~~~~~~~~lgg~i~~~~~g~l~~~~~~~~  282 (309)
                      .....|..|+.++.+.++.|...+.++.+.+.+.+.+.+...+..
T Consensus       322 ~~~~~~~~~~~~g~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~~  366 (385)
T TIGR00710       322 MAYALEDFPHVAGTASALFGTLRLVLGAIVGYLVSLIHGNTAWPM  366 (385)
T ss_pred             HHHHhccCcccchHHHHHHHHHHHHHHHHHHHHHHhccccChHHH
Confidence            222334456788999999999998877777777785544344443

This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.

>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]

Probab=99.91  E-value=1.2e-23  Score=195.73  Aligned_cols=182  Identities=22%  Similarity=0.305  Sum_probs=151.9

Q ss_pred             CCcccccchhhHHHHHhccCCCcchhHHHHHHHhhhhhHHHHhhhhHHHHh------hhcCCcchhHhhhhHHHHHHHHH
Q 021674            1 MGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLI------HRFGWPSVFYSFGSLGTVWFTVW   74 (309)
Q Consensus         1 ~Gig~g~~~p~~~~~i~~~~p~~~rg~~~g~~~~~~~~g~~lg~~l~~~l~------~~~gWr~~F~i~~~~~~v~~~~~   74 (309)
                      .|+.|++.+|+...+++.||.++|||+.+|++++..++|+++|..+...+.      ...||||.|++.|+++++..++.
T Consensus       144 lGl~es~~wP~~~~~lg~wy~~~e~g~r~~~~~a~~~~g~i~ggliA~g~~~~~~~~~~~gW~~~FiI~G~i~~~~gi~~  223 (495)
T KOG2533|consen  144 LGLFESGGWPGVVAILGNWYGKSERGLRMGIWYASASLGNIFGGLIAYGVFKLNGSGGLAGWRWLFIIEGVITLVLGIVV  223 (495)
T ss_pred             HHHHhcccchHHHHHHHhhcChhhhhhhHHHHHHhcchhhHHHHHHHHHhhhhcCCCCcCCceeehhHHHHHHHHHHheE
Confidence            388999999999999999999999999999999999999999999998863      35799999999999998877777


Q ss_pred             HhhcccCCCCCCCCCHHHHHHHHh----ccCCC-CC-CCCCChhHhhcchHHHHHHHHHHHHHHHHHHHHHhHHHHHHHH
Q 021674           75 LSKAHSSPAEDPQLRPAEKKLIVS----SCASK-EP-VKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQV  148 (309)
Q Consensus        75 ~~~~~~~p~~~~~~~~~~~~~~~~----~~~~~-~~-~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~wlp~~l~~~  148 (309)
                      +...|+.|.+..-.+++|+....+    +..+. ++ .+...+++.+|+|.+|...+..++.....|++.+|+|.|+.+.
T Consensus       224 f~~lp~~P~~~~fl~~~ek~~~~~~~~~~~~~~~~~~~~~~~~~~a~~dp~vw~~~l~~~~~~lv~~~~~~~lpl~l~~~  303 (495)
T KOG2533|consen  224 FFFLPDNPSKAWFLTDEEKELVVERLRESPSGGIENKFKWKGFKEALKDPGVWPFSLCYFFLKLVNYGFSYWLPLYLKSN  303 (495)
T ss_pred             EEEecCChhhccccchHHHHHHHHHHHhccCCCcccccCHHHHHHHHhchhHHHHHHHHHHHhhccccHHHHHHHHHHcC
Confidence            777888887654455555432211    11111 11 2234467789999999999999999999999999999999997


Q ss_pred             hCCCccchhhHhhhhHHHHHHHHHHHHHHHHHHH
Q 021674          149 LHFNLTESGLFCVLPWLTMAFSANLGGWIADTLV  182 (309)
Q Consensus       149 ~g~s~~~~g~~~~~~~~~~~ig~~~~G~l~dr~~  182 (309)
                      .|+|..++..+..+..+++.++.+++|+++||..
T Consensus       304 ~~~s~~~a~~ls~~~~~~g~v~~i~ag~lsdr~~  337 (495)
T KOG2533|consen  304 GGYSELQANLLSTPYDVGGIVGLILAGYLSDRLK  337 (495)
T ss_pred             CCcChHHhccccchHHhhhHHHHHHHHHHHHHHh
Confidence            7899999999999999999999999999999963

>PRK15034 nitrate/nitrite transport protein NarU; Provisional

Probab=99.91  E-value=5.7e-23  Score=189.76  Aligned_cols=274  Identities=14%  Similarity=0.095  Sum_probs=170.4

Q ss_pred             CcccccchhhHHHHHhccCCCcchhHHHHHHHhhhhhHHHHhhhhHHHHh-----hhc-------------CCcchhHhh
Q 021674            2 GIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLI-----HRF-------------GWPSVFYSF   63 (309)
Q Consensus         2 Gig~g~~~p~~~~~i~~~~p~~~rg~~~g~~~~~~~~g~~lg~~l~~~l~-----~~~-------------gWr~~F~i~   63 (309)
                      |++ |+.++...+.+++|||+||||+++|+.....++|..++..+...++     +.+             +||.++++.
T Consensus       139 Gig-g~~f~~~~~~vs~wfp~~~rG~A~Gi~~g~G~~G~~l~~~l~p~~i~~~l~~~~G~~~~~~~~g~~~~~~~~~~~~  217 (462)
T PRK15034        139 GFA-GANFASSMGNISFFFPKAKQGSALGINGGLGNLGVSVMQLVAPLVIFVPVFAFLGVNGVPQADGSVMSLANAAWIW  217 (462)
T ss_pred             HHH-HHhHHHHHHHHHHHCCHhHhHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhccccccccccchHHHHHHHHHH
Confidence            666 7788999999999999999999999997777777776665554433     333             366666666


Q ss_pred             hhHHHHHHHHHHhhcccCCCCCCCCCHHHHHHHHhccCCCCCCCCCChhHhhcchHHHHHHHHHHHHHHHHHHHHHhHHH
Q 021674           64 GSLGTVWFTVWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPT  143 (309)
Q Consensus        64 ~~~~~v~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~wlp~  143 (309)
                      .++.++..++.+...+|.|+++  .+                  ..++++.+|+|..|...+.+++.+-++.++..|+|.
T Consensus       218 ~~~~iv~~i~~~~~~~~~~~~~--~~------------------~~~~~~vlk~~~~Wllslly~~tFG~fvg~s~~lp~  277 (462)
T PRK15034        218 VPLLAIATIAAWSGMNDIASSR--AS------------------IADQLPVLQRLHLWLLSLLYLATFGSFIGFSAGFAM  277 (462)
T ss_pred             HHHHHHHHHHHHHhCCCccccc--cC------------------HHHHHHHhCCCchhHHHHHHHHHHHHHHHHHHHHHH
Confidence            6655554333333322221110  00                  112456899999999999999887777788889999


Q ss_pred             HHHHHhCCCccchhhHhhhhHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHhhHHHHHH-HHHhhccC-chHH-HH
Q 021674          144 YYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFF-LTQLSHVD-SPAM-AV  220 (309)
Q Consensus       144 ~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~-~~~~-~~  220 (309)
                      |+++.+  +.........+..+...+..+++|+++||+|+|+....      ..+.+...... ........ .... ..
T Consensus       278 ~~~~~~--~~~~~l~~~~l~~l~~~l~rplgG~LADRiG~~~vl~~------~~i~~~i~~~~~~l~lp~~~~~~~~~~~  349 (462)
T PRK15034        278 LAKTQF--PDVNILRLAFFGPFIGAIARSVGGAISDKFGGVRVTLI------NFIFMAIFSALLFLTLPGTGSGNFIAFY  349 (462)
T ss_pred             HHHHHc--ChHHHHHHHHHHHHHHHHHHHhhHHHHHhcCchHHHHH------HHHHHHHHHHHHHHHhccccccHHHHHH
Confidence            998754  33333333344557788899999999999997642111      11111111111 11111111 1111 11


Q ss_pred             -HHHHHHHhhhhhhhcchhhhhhccCC----------------------CchHHHHHHHhHhHhhhhhHHHhHHHhhccc
Q 021674          221 -LCMACSQGTDAFSQSGLYSNHQDIAP----------------------RYSGVLLGLSNTAGVLAGVFGTAATGYILQH  277 (309)
Q Consensus       221 -~~~~~~~~~~~~~~~~~~~~~~~~~~----------------------~~~g~a~~~~~~~~~lgg~i~~~~~g~l~~~  277 (309)
                       .++..... ....+..++....+.-|                      ++.|.++|+.+.++.+||++-|.+.|...+.
T Consensus       350 ~~~~~l~~~-~G~gngsvfk~ip~~f~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~G~v~a~G~~Ggf~~p~~~g~~~~~  428 (462)
T PRK15034        350 AVFMGLFLT-AGLGSGSTFQMIAVIFRQITIYRVKMKGGSDEQAQREAVTETAAALGFISAIGAVGGFFIPQAFGMSLNM  428 (462)
T ss_pred             HHHHHHHHH-hcccchHHHHhhHHHHhhhhhhcccccccchhHHhhHHHHHHHHHHHHHHHHHHcccchhhHHHHHHHHH
Confidence             11111111 11223333322111111                      2689999999999999999999999999887


Q ss_pred             -CCchHHHHHHHHHHHHHHHHHHhhcCCc
Q 021674          278 -GSWDDVFKVSVGLYLVGTAVWNLFSTGE  305 (309)
Q Consensus       278 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~  305 (309)
                       +++...|+...+.+++|.++-.....|+
T Consensus       429 ~g~~~~~~~~~~~~~~~~~~~~w~~y~r~  457 (462)
T PRK15034        429 TGSPVGAMKVFLIFYIVCVLLTWLVYGRR  457 (462)
T ss_pred             cCCcHHHHHHHHHHHHHHHHHHHHHhccC
Confidence             7799999999889888865544444444

>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily

Probab=99.91  E-value=5.3e-23  Score=193.67  Aligned_cols=265  Identities=18%  Similarity=0.220  Sum_probs=180.6

Q ss_pred             CCcccccchhhHHHHHhccCCCcchhHHHHHHHhhhhhHHHHhhhhHHHHhhhcCCcchhHhhhhHHHHHHHHHHhhccc
Q 021674            1 MGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVWLSKAHS   80 (309)
Q Consensus         1 ~Gig~g~~~p~~~~~i~~~~p~~~rg~~~g~~~~~~~~g~~lg~~l~~~l~~~~gWr~~F~i~~~~~~v~~~~~~~~~~~   80 (309)
                      ||++.+...|...+++.|++|+++|+++++++..+..+|..+|+.+++++.+++|||+.|++.++++++.........++
T Consensus       100 ~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~w~~~f~~~~~~~~~~~~~~~~~~~~  179 (485)
T TIGR00711       100 QGFGGGPLIPLSFSTLLNIYPPEKRGRAMAIWGLTVLVAPALGPTLGGWIIENYHWRWIFLINVPIGIIVVVVAFFILPR  179 (485)
T ss_pred             HHhhhhhHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHhhhhhccHhHhccCcCceehhhhhhHHHHHHHHHHHHHcCC
Confidence            58889999999999999999999999999999999999999999999999999999999999877776554333333343


Q ss_pred             CCCCC-CCCCHHHH--------------------------HH--------------HHhccCCCCCCCCCChhHhhcchH
Q 021674           81 SPAED-PQLRPAEK--------------------------KL--------------IVSSCASKEPVKTIPWGLILSKPP  119 (309)
Q Consensus        81 ~p~~~-~~~~~~~~--------------------------~~--------------~~~~~~~~~~~~~~~~~~l~~~~~  119 (309)
                      +++++ ++.+....                          ..              ..++..++++  ..+ .+++|+|+
T Consensus       180 ~~~~~~~~~d~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~-~~~~~~~~  256 (485)
T TIGR00711       180 DKPAASENFDFLGLLLLSVGLGSLLYGLSEGPERGWFDSNEILILSITGLVAIIAFVVWELTDDNP--LVD-LRLFKYRN  256 (485)
T ss_pred             ccccccCCCcHHHHHHHHHHHHHHHHHHhhCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHcCCCC--ccC-HHHHcCCC
Confidence            32211 11111000                          00              0000011111  122 35788998


Q ss_pred             HHHHHHHHHHHHHHHHHHHHhHHHHHHHHhCCCccchhhHhhhhHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHh
Q 021674          120 VWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIG  199 (309)
Q Consensus       120 ~~~~~~~~~~~~~~~~~~~~wlp~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~~~  199 (309)
                      ++......++.....++..+++|.|+++.+|+++.++++...+..++..++.++.|++.||+++|+.        + ..+
T Consensus       257 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~--------~-~~g  327 (485)
T TIGR00711       257 FTIGCVYMSLLGLGLYGSFYLLPLYLQQVLGYTALQAGLHILPVGLAPMLSSPIAGRMGDKIDPRKL--------V-TIG  327 (485)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcHHH--------H-HHH
Confidence            8887777788888888999999999999999999999999999999999999999999999987631        1 111


Q ss_pred             hHHHHHHHHHhh---ccCchHH-H-HHHHHHHHhhhhhhhcchhhhhhccCCCchHHHHHHHhHhHhhhhhHHHhHHHhh
Q 021674          200 FLGPAFFLTQLS---HVDSPAM-A-VLCMACSQGTDAFSQSGLYSNHQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYI  274 (309)
Q Consensus       200 ~~~~~~~~~~~~---~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~a~~~~~~~~~lgg~i~~~~~g~l  274 (309)
                      ............   ..+.+.. . ......+++.+....+.......+.++++++.+.++.|+.+++|+.+|+.+.|.+
T Consensus       328 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~i~g~~  407 (485)
T TIGR00711       328 LILYAVGFYWRAFTFTPDTPFLAIALPQFIRGFGMGCFFMPLTTIALSGLPPHKIARGSSLSNFTRQLGGSIGTALITTI  407 (485)
T ss_pred             HHHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            211111111111   1122222 1 1222223332222111111223445668899999999999999999999999999


Q ss_pred             ccc
Q 021674          275 LQH  277 (309)
Q Consensus       275 ~~~  277 (309)
                      .++
T Consensus       408 ~~~  410 (485)
T TIGR00711       408 LTN  410 (485)
T ss_pred             HHH
Confidence            875

This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.

>TIGR00892 2A0113 monocarboxylate transporter 1

Probab=99.91  E-value=4.5e-23  Score=193.02  Aligned_cols=286  Identities=13%  Similarity=0.157  Sum_probs=181.9

Q ss_pred             CCcccccchhhHHHHHhccCCCcchhHHHHHHHhhhhhHHHHhhhhHHHHhhhcCCcchhHhhhhHHHHHHHHHHhhccc
Q 021674            1 MGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVWLSKAHS   80 (309)
Q Consensus         1 ~Gig~g~~~p~~~~~i~~~~p~~~rg~~~g~~~~~~~~g~~lg~~l~~~l~~~~gWr~~F~i~~~~~~v~~~~~~~~~~~   80 (309)
                      +|++.|...+...+++.+|+| +||+++.|+.+.+.++|..+++++++++.+.+|||+.|++.+++.++..+.++...++
T Consensus       118 ~G~~~~~~~~~~~~~~~~~~~-~~r~~a~g~~~~~~~~g~~~~~~l~~~l~~~~gwr~~f~~~~~~~~~~~v~~~~~~~~  196 (455)
T TIGR00892       118 TGLGLAFNFQPSLTMLGKYFY-RRRPLANGLAMAGSPVFLSTLAPLNQYLFESFGWRGSFLILGGLLLHCCVCGALMRPV  196 (455)
T ss_pred             HHhcchhhhhHHHHHHHHHHH-hhHHHHHHHHHhcccHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhCCC
Confidence            477888777788889999996 7899999999999999999999999999999999999999888766543322222221


Q ss_pred             CCCCCCCCCHHHHHH----HHhc----cCCCCCCCCCChhHhhcchHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhCCC
Q 021674           81 SPAEDPQLRPAEKKL----IVSS----CASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFN  152 (309)
Q Consensus        81 ~p~~~~~~~~~~~~~----~~~~----~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~wlp~~l~~~~g~s  152 (309)
                      .+++++...++++..    ..++    ...++..+..++ +++|+|+++......++...+.+...+|+|.|+++ +|++
T Consensus       197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~-~g~s  274 (455)
T TIGR00892       197 GPSQRVSKSKSKEGLPPDGSTKKLSKKSTAEKINRFLDF-SLFTHRGFLVYLSGNVIMFLGFFAPIIFLVPYAKD-KGVD  274 (455)
T ss_pred             CcccccccccccccCCCCCccccccccchhhhhhhhcch-HHhcCchHHHHHHHHHHHHHHccchHHHHHHHHHH-cCCC
Confidence            111000000000000    0000    000000011122 47899999887777777777788889999999976 7999


Q ss_pred             ccchhhHhhhhHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHhhHHHHHHHHHhhccCchHHH-HHHHHHHHhhhh
Q 021674          153 LTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSPAMA-VLCMACSQGTDA  231 (309)
Q Consensus       153 ~~~~g~~~~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~  231 (309)
                      ..+++++.++.+++..++.+++|+++||...|+.     ++......++...+........++.+.. +..+..+++.+.
T Consensus       275 ~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~-----~~~~~~~~~~~~~l~~ll~~~~~~~~~~~i~~~~~G~~~g~  349 (455)
T TIGR00892       275 EYEAAFLLSIIGFVDIFARPSCGLIAGLKWIRPH-----VQYLFSFALLFNGLTHLLCALAGDYTGLVIYCIFFGLSFGS  349 (455)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhcccccCHH-----HHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHhch
Confidence            9999999999999999999999999997422110     1111111111111111111122233322 222223332221


Q ss_pred             hhhcchhhhh-hccCCCchHHHHHHHhHhHhhhhhHHHhHHHhhccc-CCchHHHHHHHHHHHHHH
Q 021674          232 FSQSGLYSNH-QDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQH-GSWDDVFKVSVGLYLVGT  295 (309)
Q Consensus       232 ~~~~~~~~~~-~~~~~~~~g~a~~~~~~~~~lgg~i~~~~~g~l~~~-~~~~~~~~~~~~~~~~~~  295 (309)
                      . ....++.. +..++++++.+.++.+...++|++++|.+.|.+.|. ++|+..|.+.+++.+++.
T Consensus       350 ~-~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~igp~i~G~l~~~~g~~~~~f~~~~~~~li~~  414 (455)
T TIGR00892       350 V-GALLFEVLMDLVGAQRFSSAVGLVTIVECCAVLIGPPLAGRLVDATKNYKYIFYASGSIVVSAG  414 (455)
T ss_pred             H-HHHHHHHHHHHhhHHHHhhHHhHHHHHHHHHHHccccceeeeehhcCCcchHHHHhhHHHHHHH
Confidence            1 11222222 234567889999999999999999999999999997 468888877666555443

>PRK10504 putative transporter; Provisional

Probab=99.91  E-value=3.6e-22  Score=187.62  Aligned_cols=269  Identities=12%  Similarity=0.098  Sum_probs=176.5

Q ss_pred             CCcccccchhhHHHHHhccCCCcchhHHHHHHHhhhhhHHHHhhhhHHHHhhhcCCcchhHhhhhHHHHHHHHHHhhccc
Q 021674            1 MGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVWLSKAHS   80 (309)
Q Consensus         1 ~Gig~g~~~p~~~~~i~~~~p~~~rg~~~g~~~~~~~~g~~lg~~l~~~l~~~~gWr~~F~i~~~~~~v~~~~~~~~~~~   80 (309)
                      ||++.|...|....++.|++|+++|+++.++.....++|..+|+++++.+.++.|||+.|++..++..+.........++
T Consensus       108 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~g~l~~~~gw~~~f~~~~~~~~l~~~~~~~~~~~  187 (471)
T PRK10504        108 QGVGGAMMVPVGRLTVMKIVPREQYMAAMTFVTLPGQVGPLLGPALGGLLVEYASWHWIFLINIPVGIIGAIATLMLMPN  187 (471)
T ss_pred             HHhhhHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence            58899999999999999999999999999999999999999999999999999999999998776655443333333333


Q ss_pred             CCCCCCCCCHHHHHH---------------------------------------HHhccCCCCCCCCCChhHhhcchHHH
Q 021674           81 SPAEDPQLRPAEKKL---------------------------------------IVSSCASKEPVKTIPWGLILSKPPVW  121 (309)
Q Consensus        81 ~p~~~~~~~~~~~~~---------------------------------------~~~~~~~~~~~~~~~~~~l~~~~~~~  121 (309)
                      +++++++.+......                                       ..++...+  .+..+. +++|||+++
T Consensus       188 ~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~-~l~~~~~~~  264 (471)
T PRK10504        188 YTMQTRRFDLSGFLLLAVGMATLTLALDGSKGLGLSPLAIAGLVAVGVVALLLYLLHARNNN--RALFSL-KLFRTRTFS  264 (471)
T ss_pred             ccccCCCCChHHHHHHHHHHHHHHHHHhcCCcCCcchHHHHHHHHHHHHHHHHHHHHHhcCC--CCccCH-HHhcccchH
Confidence            322222222110000                                       00011111  123344 478999988


Q ss_pred             HHHHHHHHHHHHHHHHHHhHHHHHHHHhCCCccchhhHhhhhHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHhhH
Q 021674          122 ALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFL  201 (309)
Q Consensus       122 ~~~~~~~~~~~~~~~~~~wlp~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~~~~~  201 (309)
                      ......++...+......+.|.|++..+|.++.+++++..+..++..++.++.|+++||+++|+..       .......
T Consensus       265 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~r~g~~~~~-------~~~~~~~  337 (471)
T PRK10504        265 LGLAGSFAGRIGSGMLPFMTPVFLQIGLGFSPFHAGLMMIPMVLGSMGMKRIVVQVVNRFGYRRVL-------VATTLGL  337 (471)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHH-------HHHHHHH
Confidence            877777777667666778899999988999999999999888888888889999999999876321       1111111


Q ss_pred             HHH-HHHHHhhccCchHHH-HHHHHHHHhhhhhhhcchhh-hhhccCCCchHHHHHHHhHhHhhhhhHHHhHHHhhcccC
Q 021674          202 GPA-FFLTQLSHVDSPAMA-VLCMACSQGTDAFSQSGLYS-NHQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQHG  278 (309)
Q Consensus       202 ~~~-~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~g~a~~~~~~~~~lgg~i~~~~~g~l~~~~  278 (309)
                      ... .........++.... ......+.+.+.. .+.... ...+.+++.++.+.++.|+..++|..+|+.+.|.+++..
T Consensus       338 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~-~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~i~g~ll~~~  416 (471)
T PRK10504        338 ALVSLLFMLVALLGWYYLLPFVLFLQGMVNSTR-FSSMNTLTLKDLPDNLASSGNSLLSMIMQLSMSIGVTIAGLLLGLF  416 (471)
T ss_pred             HHHHHHHHhccccccHHHHHHHHHHHHHHHHHH-HHHHHHHHHHcCCHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            111 111111111222111 1122222221111 111111 123456678999999999999999999999999998864


Q ss_pred             Cc
Q 021674          279 SW  280 (309)
Q Consensus       279 ~~  280 (309)
                      ++
T Consensus       417 g~  418 (471)
T PRK10504        417 GQ  418 (471)
T ss_pred             hh
Confidence            33

>TIGR00900 2A0121 H+ Antiporter protein

Probab=99.91  E-value=1.4e-22  Score=183.11  Aligned_cols=257  Identities=14%  Similarity=0.115  Sum_probs=172.7

Q ss_pred             CCcccccchhhHHHHHhccCCCcchhHHHHHHHhhhhhHHHHhhhhHHHHhhhcCCcchhHhhhhHHHHHHHHHHh-hcc
Q 021674            1 MGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVWLS-KAH   79 (309)
Q Consensus         1 ~Gig~g~~~p~~~~~i~~~~p~~~rg~~~g~~~~~~~~g~~lg~~l~~~l~~~~gWr~~F~i~~~~~~v~~~~~~~-~~~   79 (309)
                      +|++.+...|+..+++.|++|++||++++++.+.+.++|.++++++++++.+++|||+.|++.++..++....... +.+
T Consensus       102 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~  181 (365)
T TIGR00900       102 LAIAQAFFTPAYQAMLPDLVPEEQLTQANSLSQAVRSLFYIVGPGIGGLMYATLGIKWAIWVDAVGFAISALLIVSVRIP  181 (365)
T ss_pred             HHHHHHHHHHHHHHHHHhcCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhcccc
Confidence            4678888899999999999999999999999999999999999999999999999999999866655443222222 222


Q ss_pred             cCCCCCCCCCHHHHHHHHhccCCCCCCCCCChhHhhcchHHHHHHHHHHHHHHHHHHHH-HhHHHHHHHHhCCCccchhh
Q 021674           80 SSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILL-TWMPTYYNQVLHFNLTESGL  158 (309)
Q Consensus        80 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~wlp~~l~~~~g~s~~~~g~  158 (309)
                      |++++++  ++.+++..+      +.  ..++++++|||.++......++.....+... .+.|.|+++.+|.+..+.+.
T Consensus       182 ~~~~~~~--~~~~~~~~~------~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  251 (365)
T TIGR00900       182 ELAASEI--QALSNAVLR------DT--REGIKFVLKNPLLRTLLLLALLFNLVFAPAIVALFPYVQSKYLGRGSTHYGW  251 (365)
T ss_pred             cCCCccc--cccchhHHH------HH--HhHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCchHHHHH
Confidence            2211111  110000000      00  1135667899998887777776666666666 89999999889999999999


Q ss_pred             HhhhhHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHhhHHHHHHHHHhhccC-chHHH-HHHHHHHHhhhhhhhcc
Q 021674          159 FCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVD-SPAMA-VLCMACSQGTDAFSQSG  236 (309)
Q Consensus       159 ~~~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~  236 (309)
                      +.....++..++.++.+++.||.++|+.        +. .+.....+........+ +.... +.....+++.+.. .+.
T Consensus       252 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~--------~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~-~~~  321 (365)
T TIGR00900       252 VLAAFGLGALLGALLLGLLGRYFKRMAL--------MT-GAIFVIGLAILVVGLTPPNFPLFLVLWFAIGVGYGPI-NVP  321 (365)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhchhHH--------HH-HHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHHHHHH-HHH
Confidence            9999999999999999999999876521        11 11111111111111111 12221 2222222222211 122


Q ss_pred             hhhhhh-ccCCCchHHHHHHHhHhHhhhhhHHHhHHHhhccc
Q 021674          237 LYSNHQ-DIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQH  277 (309)
Q Consensus       237 ~~~~~~-~~~~~~~g~a~~~~~~~~~lgg~i~~~~~g~l~~~  277 (309)
                      ...... ..++++++.+.++.|...++++.++|.+.|.+.|+
T Consensus       322 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~g~~~~g~l~~~  363 (365)
T TIGR00900       322 QGTLLQRRVPAELLGRVFGAQFSLSHAAWPLGLILAGPLADH  363 (365)
T ss_pred             HHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            222223 34567899999999999999999999999999886

>PRK11102 bicyclomycin/multidrug efflux system; Provisional

Probab=99.91  E-value=5e-22  Score=181.08  Aligned_cols=173  Identities=13%  Similarity=0.173  Sum_probs=134.8

Q ss_pred             CCcccccchhhHHHHHhccCCCcchhHHHHHHHhhhhhHHHHhhhhHHHHhhhcCCcchhHhhhhHHHHHHHHHHhhccc
Q 021674            1 MGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVWLSKAHS   80 (309)
Q Consensus         1 ~Gig~g~~~p~~~~~i~~~~p~~~rg~~~g~~~~~~~~g~~lg~~l~~~l~~~~gWr~~F~i~~~~~~v~~~~~~~~~~~   80 (309)
                      +|++.+...+...+++.|++|+|+|++++++.+....+|..+++.+++.+.+++|||+.|++.+.+.++..+......+|
T Consensus        89 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  168 (377)
T PRK11102         89 HGLAAAAASVVINALMRDMFPKEEFSRMMSFVTLVMTIAPLLAPIIGGWLLVWFSWHAIFWVLALAAILAAALVFFFIPE  168 (377)
T ss_pred             HHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHHHhCCc
Confidence            36777888889999999999999999999999999999999999999999999999999998777766544333333444


Q ss_pred             CCCCCCCCCHHHHHHHHhccCCCCCCCCCChhHhhcchHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhCCCccchhhHh
Q 021674           81 SPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFC  160 (309)
Q Consensus        81 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~wlp~~l~~~~g~s~~~~g~~~  160 (309)
                      +++++++.+.+.+          +  ...++++++|+|+.+......++...+.+.+.++.|.++.+.+|+++.+.+.+.
T Consensus       169 ~~~~~~~~~~~~~----------~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~  236 (377)
T PRK11102        169 TLPKERRQPFHLR----------T--TIRNFASLFRHKRVLGYMLASGFSFAGMFSFLTAGPFVYIELNGVSPQNFGYYF  236 (377)
T ss_pred             cCcccccCCCChH----------H--HHHHHHHHHcChHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHhCCCHHHHHHHH
Confidence            3222110000000          0  011345678898888766666666677788889999999998999999999999


Q ss_pred             hhhHHHHHHHHHHHHHHHHHHHHcC
Q 021674          161 VLPWLTMAFSANLGGWIADTLVSKG  185 (309)
Q Consensus       161 ~~~~~~~~ig~~~~G~l~dr~~~r~  185 (309)
                      .+..++..++.++.|++.||+++|+
T Consensus       237 ~~~~~~~~~~~~~~g~l~~r~g~~~  261 (377)
T PRK11102        237 ALNIVFLFVMTIINSRFVRRVGALN  261 (377)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhCHHH
Confidence            9999999999999999999998764

>TIGR00883 2A0106 metabolite-proton symporter

Probab=99.90  E-value=2e-22  Score=183.73  Aligned_cols=270  Identities=16%  Similarity=0.153  Sum_probs=172.5

Q ss_pred             CCcccccchhhHHHHHhccCCCcchhHHHHHHHhhhhhHHHHhhhhHHHHh--------hhcCCcchhHhhhhHHHHHHH
Q 021674            1 MGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLI--------HRFGWPSVFYSFGSLGTVWFT   72 (309)
Q Consensus         1 ~Gig~g~~~p~~~~~i~~~~p~~~rg~~~g~~~~~~~~g~~lg~~l~~~l~--------~~~gWr~~F~i~~~~~~v~~~   72 (309)
                      ||++.+...+....+++|++|+|||+++.++...+..+|.++++.++..+.        +.++||+.|++.+++.++.. 
T Consensus       106 ~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~G~~i~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~-  184 (394)
T TIGR00883       106 QGFSLGGEWGGAALYLAEYAPPGKRGFYGSFQQVGAPVGLLLAALTVLLLSYLLGDDALLEWGWRIPFLVSAVLVLIGL-  184 (394)
T ss_pred             HHhhccccccccHHHhhhcCCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHhhccchHHHHHHHHHHHHHHH-
Confidence            588999999999999999999999999999999999999999998876654        46799999998665554432 


Q ss_pred             HHHhhcccCCCCCCCCCHHHHHHHHhccCCCCCCCCCChhHhhcchH--HHHHHHHHHHHHHHHHHHHHhHHHHHHHHhC
Q 021674           73 VWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPP--VWALIVSHFCHNWGTFILLTWMPTYYNQVLH  150 (309)
Q Consensus        73 ~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~--~~~~~~~~~~~~~~~~~~~~wlp~~l~~~~g  150 (309)
                      ......+|+|++     ++++    + + +++  ++.++++.+|+++  ++......++.....+...+|+|.|+++++|
T Consensus       185 ~~~~~~~~~~~~-----~~~~----~-~-~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g  251 (394)
T TIGR00883       185 YLRRNLEETPVF-----EKAQ----E-K-HKK--KRGPIRETLTKHRKPFLLGLGLVIATTTTFYLITTYLPTYLTQTLG  251 (394)
T ss_pred             HHHHhcCCChhH-----HHHH----h-c-ccc--ccCCHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence            222223332211     0000    0 0 111  1234566777765  6666666666667778888999999999899


Q ss_pred             CCccchhhHhhhhHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHhhHHHH-HHHHHhhccCchHHHHHH-HHHHHh
Q 021674          151 FNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPA-FFLTQLSHVDSPAMAVLC-MACSQG  228 (309)
Q Consensus       151 ~s~~~~g~~~~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~-~~~~~~  228 (309)
                      .+..+.+.......++..++.++.|+++||+++|+...      .......... .........++....... ...+.+
T Consensus       252 ~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~  325 (394)
T TIGR00883       252 LSANSALLVLMLSLILFFITIPLSGALSDRIGRRPVLI------IFTVLAALLAVPLLMALLDSGSFTLFFFLVLGLALI  325 (394)
T ss_pred             CChhHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHH------HHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHH
Confidence            99999999988889999999999999999998763111      0111111111 111111111222222211 112222


Q ss_pred             hhhhhhcchhhhhhc-cCCCchHHHHHHH-hHhHhhhhhHHHhHHHhhcccCC-chHHHHHHHHHH
Q 021674          229 TDAFSQSGLYSNHQD-IAPRYSGVLLGLS-NTAGVLAGVFGTAATGYILQHGS-WDDVFKVSVGLY  291 (309)
Q Consensus       229 ~~~~~~~~~~~~~~~-~~~~~~g~a~~~~-~~~~~lgg~i~~~~~g~l~~~~~-~~~~~~~~~~~~  291 (309)
                      .+.. .+...+...| .+++.++.+.++. +....+|+.++|.+.|.+.|+.+ |...++....+.
T Consensus       326 ~~~~-~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~g~~~~p~~~g~l~~~~g~~~~~~~~~~~~~  390 (394)
T TIGR00883       326 GGMY-TGPMGSFLPELFPTEVRYTGASLAYNLAGAIFGGFAPYIAAALVAMTGDWYAIGYYLAALA  390 (394)
T ss_pred             HHHH-hhhHHHHHHHhCCccceeeEeeehhHhHHHHHhhHHHHHHHHHHHHcCcchhHHHHHHHHH
Confidence            1111 1222333333 3456788887774 44456788899999999999855 766655544443

This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.

>PRK10489 enterobactin exporter EntS; Provisional

Probab=99.90  E-value=3.9e-22  Score=184.61  Aligned_cols=274  Identities=16%  Similarity=0.088  Sum_probs=176.4

Q ss_pred             CcccccchhhHHHHHhccCCCcchhHHHHHHHhhhhhHHHHhhhhHHHHhhhcCCcchhHhhhhHHHHHHHHHHhhcccC
Q 021674            2 GIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVWLSKAHSS   81 (309)
Q Consensus         2 Gig~g~~~p~~~~~i~~~~p~~~rg~~~g~~~~~~~~g~~lg~~l~~~l~~~~gWr~~F~i~~~~~~v~~~~~~~~~~~~   81 (309)
                      |++.+...|+..+++.|++|+++|+++.++...+.++|..+|+.+++.+.+..|||+.|++.++..++..+. ....+++
T Consensus       121 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~g~l~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~  199 (417)
T PRK10489        121 GFFGSLGVTALLAATPALVGRENLMQAGAITMLTVRLGSVISPALGGLLIAAGGVAWNYGLAAAGTFITLLP-LLRLPAL  199 (417)
T ss_pred             HHHHHHHHHHHhhhhhhccCHHHHHHHHHHHHHHHhHHHHhHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHH-HHhCCCC
Confidence            556666778888999999999999999999999999999999999999999999999999866555443322 2333433


Q ss_pred             CCCCCCCCHHHHHHHHhccCCCCCCCCCChhHhhcchHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhCCCccchhhHhh
Q 021674           82 PAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCV  161 (309)
Q Consensus        82 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~wlp~~l~~~~g~s~~~~g~~~~  161 (309)
                      ++++.+. +++.         ++.  ..+++.++|+|.++...+..++.. ...+..+|+|.|+++.+|+++.+.+++..
T Consensus       200 ~~~~~~~-~~~~---------~~~--~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~p~~~~~~~g~~~~~~g~~~~  266 (417)
T PRK10489        200 PPPPQPR-EHPL---------RSL--LAGFRFLLASPVVGGIALLGGLLT-MASAVRVLYPALADEVWQMGAAQIGLLYA  266 (417)
T ss_pred             CCCCccc-ccch---------HHH--HHHHHHHHcChHHHHHHHHHHHHH-HHHhHHHhhHHHHHhccCCChhHhHHHHH
Confidence            2211000 0000         000  112455778888766555444432 34567889999999889999999999998


Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHhhHHHHHHHHHhhccCchHHHH-HHHHHHHhhhhhhhcchhhh
Q 021674          162 LPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSPAMAV-LCMACSQGTDAFSQSGLYSN  240 (309)
Q Consensus       162 ~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~  240 (309)
                      ...++..++.++.+++.||.++++        .+. .+.....+........++..... .....+.+.+ .........
T Consensus       267 ~~~~g~~ig~~~~~~l~~~~~~~~--------~l~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~  336 (417)
T PRK10489        267 AVPLGAALGALTSGWLAHSARPGL--------LML-LSTLGSFLAVGLFGLMPMWILAVLCLALFGYLSA-ISSLLQYTL  336 (417)
T ss_pred             HHHHHHHHHHHHHHHhhhccCcch--------HHH-HHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHH-HHHHHHHHH
Confidence            889999999999999999843221        111 11111111111122222222222 2222222221 111112233


Q ss_pred             hhcc-CCCchHHHHHHHhHhHhhhhhHHHhHHHhhcccCCchHHHHHHHHHHHH-HHHHHH
Q 021674          241 HQDI-APRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSWDDVFKVSVGLYLV-GTAVWN  299 (309)
Q Consensus       241 ~~~~-~~~~~g~a~~~~~~~~~lgg~i~~~~~g~l~~~~~~~~~~~~~~~~~~~-~~~~~~  299 (309)
                      .++. +++.+|.+.++.+...++|+.++|.+.|.+.|..++...+...+++.++ +.+.+.
T Consensus       337 ~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~l~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~  397 (417)
T PRK10489        337 LQTQTPDEMLGRINGLWTAQNVTGDAIGAALLGGLGAMMTPVASASASGFGLLIIGVLLLL  397 (417)
T ss_pred             HHhhCCHHHHHHHHHHHHHHHhhhHhHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHH
Confidence            3444 4467999999999999999999999999999987776666655555444 444433

>PRK12307 putative sialic acid transporter; Provisional

Probab=99.90  E-value=3.7e-22  Score=185.07  Aligned_cols=266  Identities=15%  Similarity=0.132  Sum_probs=165.4

Q ss_pred             CCcccccchhhHHHHHhccCCCcchhHHHHHHHhhhhhHHHHhhhhHHHHhhhcCCcchhHhhhhHHHHHHHHHHhh-cc
Q 021674            1 MGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVWLSK-AH   79 (309)
Q Consensus         1 ~Gig~g~~~p~~~~~i~~~~p~~~rg~~~g~~~~~~~~g~~lg~~l~~~l~~~~gWr~~F~i~~~~~~v~~~~~~~~-~~   79 (309)
                      +|+|.|...+....++.|++|+|+|+++.++...+.++|.++++.+.+.+.+++|||+.|++... ..+. .++++. .|
T Consensus       116 ~G~g~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~~~~~l~~~l~~~~~w~~~f~i~~~-~~~~-~~~~~~~~p  193 (426)
T PRK12307        116 VGMGMAGEYACASTYAVESWPKHLKSKASAFLVSGFGIGNIIAAYFMPSFAEAYGWRAAFFVGLL-PVLL-VIYIRARAP  193 (426)
T ss_pred             HHHHHhhHHHHHHHHHHHhCCHhHhhHhhhHHHHHHhHHHHHHHHHHHHHcccCCHHHHHHHHHH-HHHH-HHHHHHHCC
Confidence            47888999999999999999999999999999999999999999999999999999999997433 2222 122222 12


Q ss_pred             cCCCCCCCCCHHHHHHHHhccCCCC--CCCCCChhHhhcchHHHHHHHH---HHHHHHHHHHHHHhHHHHHHHHhCCCcc
Q 021674           80 SSPAEDPQLRPAEKKLIVSSCASKE--PVKTIPWGLILSKPPVWALIVS---HFCHNWGTFILLTWMPTYYNQVLHFNLT  154 (309)
Q Consensus        80 ~~p~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~~~~~~~~~~~---~~~~~~~~~~~~~wlp~~l~~~~g~s~~  154 (309)
                      |+++.      ++++...+++.+++  ...+.++++++|+|.++.....   .++.....+.+..|+|.|+++ +|+++.
T Consensus       194 ~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~  266 (426)
T PRK12307        194 ESKEW------EEAKLSGKGKHSQSAWSVFSLSMKGLFNRAQFPLTLCVFIVLFSIFGANWPIFGLLPTYLAG-EGFDTG  266 (426)
T ss_pred             CChHH------HHhhhhccccccccchhhhhHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCCHH
Confidence            21110      00000000000000  0011245678888877654322   222223345678899999986 599999


Q ss_pred             chhhHhhhhHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHhhHHHHHHHHHhhccCchHHHHHHHHHHHhhhhhhh
Q 021674          155 ESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSPAMAVLCMACSQGTDAFSQ  234 (309)
Q Consensus       155 ~~g~~~~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (309)
                      +.+.......++..++.++.|+++||+++|+..       ...................+.. ..+.....+.+......
T Consensus       267 ~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~  338 (426)
T PRK12307        267 VVSNLMTAAAFGTVLGNIVWGLCADRIGLKKTF-------SIGLLMSFLFIFPLFRIPQDNY-LLLGACLFGLMATNVGV  338 (426)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHH-------HHHHHHHHHHHHHHHHHccccH-HHHHHHHHHHHHhcccH
Confidence            999988888999999999999999999876311       1111111111111111111222 21111111111110001


Q ss_pred             cch-hhhh-hccCCCchHHHHHHHhHhHhhhhhHHHhHHHhhcccCCchHH
Q 021674          235 SGL-YSNH-QDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSWDDV  283 (309)
Q Consensus       235 ~~~-~~~~-~~~~~~~~g~a~~~~~~~~~lgg~i~~~~~g~l~~~~~~~~~  283 (309)
                      ... .... +..+++.+|.+.|+.+...++++.++|.+.|++.|+.++...
T Consensus       339 ~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~~~~~gp~~~g~l~~~~g~~~~  389 (426)
T PRK12307        339 GGLVPKFLYDYFPLEVRGLGTGLIYNLAATSGTFNSMAATWLGITMGLGAA  389 (426)
T ss_pred             hHHHHHHHHHhCcHHHHhhhhhHHHHHHhHHHHHHHHHHHHHHHcccHHHH
Confidence            111 1122 334556799999999999999999999999999998766543

>PRK05122 major facilitator superfamily transporter; Provisional

Probab=99.90  E-value=1.4e-21  Score=179.81  Aligned_cols=270  Identities=19%  Similarity=0.152  Sum_probs=173.3

Q ss_pred             CCcccccchhhHHHHHhccCCCcchhHHHHHHHhhhhhHHHHhhhhHHHHhhhcCCcchhHhhhhHHHHHHHHHHhhccc
Q 021674            1 MGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVWLSKAHS   80 (309)
Q Consensus         1 ~Gig~g~~~p~~~~~i~~~~p~~~rg~~~g~~~~~~~~g~~lg~~l~~~l~~~~gWr~~F~i~~~~~~v~~~~~~~~~~~   80 (309)
                      +|+|++...|...+++.|++|+|||++++++...+.++|.++|+++++++.+++|||+.|++..++.++.. +..+..  
T Consensus       122 ~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~g~~~~~~~~~~~~~~~~-~~~~~~--  198 (399)
T PRK05122        122 LGIGESLAGTGSILWGIGRVGALHTGRVISWNGIATYGALAIGAPLGVLLYHWGGLAGLGLLIMLLALLGL-LLARPR--  198 (399)
T ss_pred             HHhhHHhhcchHHHHHHhhcChhhhccchhhhhhhhhHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHH-HHHhcC--
Confidence            58899999999999999999999999999999999999999999999999999999999987666554432 222211  


Q ss_pred             CCCCCCCCCHHHHHHHHhccCCCCCCCCCChhHhhcchHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhCCCccchhhHh
Q 021674           81 SPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFC  160 (309)
Q Consensus        81 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~wlp~~l~~~~g~s~~~~g~~~  160 (309)
                       |+++++ ++ +               +.++++.+|+  .|.......+.........+|+|.|+++ +|+  .+.+...
T Consensus       199 -~~~~~~-~~-~---------------~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~--~~~~~~~  255 (399)
T PRK05122        199 -PAVPPV-KG-E---------------RLPFRRVLGR--VWPYGMGLALASIGFGTIATFITLYYAA-RGW--DGAALAL  255 (399)
T ss_pred             -CCCCCC-Cc-c---------------chhHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHH-ccc--ccchHHH
Confidence             211110 00 0               0122333332  2322222333445566777899999875 466  3456666


Q ss_pred             hhhHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHhhHHHHHHHHHhhccCchHHHH-HHHHHHHhhhhhhhcchhh
Q 021674          161 VLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSPAMAV-LCMACSQGTDAFSQSGLYS  239 (309)
Q Consensus       161 ~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~  239 (309)
                      ....++..++.++.|++.||+++|+.        +. ................++....+ .....+++.+.. .+....
T Consensus       256 ~~~~~~~~~~~~~~g~l~~r~~~~~~--------~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~-~~~~~~  325 (399)
T PRK05122        256 TLFGVAFVGARLLFGNLINRLGGLRV--------AI-VSLLVEILGLLLLWLAPSPWMALIGAALTGFGFSLV-FPALGV  325 (399)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhccHHH--------HH-HHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhHHHH-HHHHHH
Confidence            67778888999999999999986531        11 11111111111111222332222 222223222211 111111


Q ss_pred             -hhhccCCCchHHHHHHHhHhHhhhhhHHHhHHHhhcccCCchHHHHHHHHHHHHHHHHHHhhcCCcc
Q 021674          240 -NHQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSWDDVFKVSVGLYLVGTAVWNLFSTGEK  306 (309)
Q Consensus       240 -~~~~~~~~~~g~a~~~~~~~~~lgg~i~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  306 (309)
                       ..+..+++++|.+.++.+...++|+.++|.+.|.+.|+.+|+..+.+.+++.+++.+....+.+|++
T Consensus       326 ~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  393 (399)
T PRK05122        326 EAVKRVPPQNRGAALGAYSVFLDLSLGITGPLAGLVASWFGYPSIFLAAALAALLGLALTWLLYRRAP  393 (399)
T ss_pred             HHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHhccccc
Confidence             1234566789999999999999999999999999999888999998887777777655555544433

>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms

Probab=99.90  E-value=1.8e-23  Score=188.04  Aligned_cols=254  Identities=26%  Similarity=0.470  Sum_probs=167.6

Q ss_pred             CCcccccchhhHHHHHhccCCCcchhHHHHHHHhhhhhHHHHhhhhHHHHhhhcCCcchhHhhhhHHHHHHHHHHhhccc
Q 021674            1 MGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVWLSKAHS   80 (309)
Q Consensus         1 ~Gig~g~~~p~~~~~i~~~~p~~~rg~~~g~~~~~~~~g~~lg~~l~~~l~~~~gWr~~F~i~~~~~~v~~~~~~~~~~~   80 (309)
                      +|++.+...|...+++.|++|+|||++++++.....++|.++++.+++.+.+++|||+.|++.+++.++..++.....++
T Consensus        95 ~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~il~~~~~~~  174 (352)
T PF07690_consen   95 LGIGSGFFSPASNALIADWFPPEERGRAFGILSAGFSLGSILGPLLGGFLISYFGWRWAFLISAILSLIAAILFILFLPE  174 (352)
T ss_dssp             HHHHHHHHHHHHHHHHHHCCCTCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHCHHCCHHHHHHHHHHHHHHHHHCCC--
T ss_pred             cccccccccccccccccccchhhhhhhccccccchhhhhhhcccchhhhhhhccccccccccccchhhhhhhhHhhhhhh
Confidence            47788899999999999999999999999999999999999999999999999999999999888877664432233333


Q ss_pred             CCCCCCCCCHHHHHHHHhccCCCCCCCCCC-hhHhhcchHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhCCC-ccchhh
Q 021674           81 SPAEDPQLRPAEKKLIVSSCASKEPVKTIP-WGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFN-LTESGL  158 (309)
Q Consensus        81 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~~~wlp~~l~~~~g~s-~~~~g~  158 (309)
                      +|+++++.++++++       ++++.+..+ ++.++++|.+|......++.....+...+|+|.|+++.+|++ ..+.+.
T Consensus       175 ~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~  247 (352)
T PF07690_consen  175 PPPPRERESPKESE-------SKKPKPLKPGFKSLFKNPVLWILLIAFFLFFFVFSGFSFFLPLYLQEVLGFSGPSQAGL  247 (352)
T ss_dssp             -STTTT--SSTTTT---------HHHCCCH-CTHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCTHHHHHH
T ss_pred             cccccccccccccc-------cccccccccccccccccchhhhhhhhhhHHHHHHHHhhcccchhhhhccCCCHHHHHHH
Confidence            33222111111110       000001122 567788887775555555555677789999999999999999 789999


Q ss_pred             HhhhhHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHhhHHHHHHHHHhhccCchHHHH-HHHHHHHhhhhhhhcch
Q 021674          159 FCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSPAMAV-LCMACSQGTDAFSQSGL  237 (309)
Q Consensus       159 ~~~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~  237 (309)
                      +..+..+...++.++.|+++||+++|+      +..............+......++..+.. .....+.+.+ ...+..
T Consensus       248 ~~~~~~~~~~~~~~~~~~l~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~-~~~~~~  320 (352)
T PF07690_consen  248 LFSIFGIVGIIGSLLAGRLSDRFGRRR------RLLIAILLLILGALGLLLLPFSSSPVWLIIALFLIGFGFG-IVFPIL  320 (352)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHTTCHH------HHHHHHHHHHHHHHHHCCSHHHCHHHHHHHHHHHHHHHHH-HHCHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHcCcHH------HHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHH-HHHHHH
Confidence            899999999999999999999987542      11111111111111111111122222222 2222333222 112223


Q ss_pred             hhhhhc-cCCCchHHHHHHHhHhHhhhhhHHH
Q 021674          238 YSNHQD-IAPRYSGVLLGLSNTAGVLAGVFGT  268 (309)
Q Consensus       238 ~~~~~~-~~~~~~g~a~~~~~~~~~lgg~i~~  268 (309)
                      .....+ .+++++|.+.++.+...++++.++|
T Consensus       321 ~~~~~~~~~~~~~g~~~g~~~~~~~~~~~igP  352 (352)
T PF07690_consen  321 FSLIQELVPPEYRGTAFGLFNSIGSLGGIIGP  352 (352)
T ss_dssp             HHHHHCCCHTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHhCCHHHHHHHHHHHHHHHHHHHHHCC
Confidence            333333 4557899999999999999999987

These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.

>PRK11195 lysophospholipid transporter LplT; Provisional

Probab=99.90  E-value=8.4e-22  Score=181.12  Aligned_cols=287  Identities=12%  Similarity=0.012  Sum_probs=182.6

Q ss_pred             CCcccccchhhHHHHHhccCCCcchhHHHHHHHhhhhhHHHHhhhhHHHHhhhcCCcchhHhhhhHHHHHHHHHHhhccc
Q 021674            1 MGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVWLSKAHS   80 (309)
Q Consensus         1 ~Gig~g~~~p~~~~~i~~~~p~~~rg~~~g~~~~~~~~g~~lg~~l~~~l~~~~gWr~~F~i~~~~~~v~~~~~~~~~~~   80 (309)
                      ||+++|...|+..+++.|++|+|||++++|+.+...++|.++|+.+++++.++. |+..|.+.+...++. .+.....||
T Consensus        98 ~G~~~a~~~pa~~a~i~~~~~~~~~~~a~~~~~~~~~~~~~~Gp~lgG~l~~~~-~~~~~~i~~~~~~~~-~~~~~~l~~  175 (393)
T PRK11195         98 VGIGAAAYSPAKYGILTELLPGEKLVKANGWMEGSTIAAILLGTVLGGALADPH-AEAALAVCALIYLLA-ALFNLFIPR  175 (393)
T ss_pred             HHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHH-HHHHhcCCC
Confidence            689999999999999999999999999999999999999999999999998864 888887765443322 222233444


Q ss_pred             CCCCCCCCCHHHHHHHHhccCCCCCCCCCChhHhhcchHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhCCCccchhhHh
Q 021674           81 SPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFC  160 (309)
Q Consensus        81 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~wlp~~l~~~~g~s~~~~g~~~  160 (309)
                      +|+++++.+++++...++ .       ...++.++|+|.++.......+...........+|.|+++.+|+|+.+.|++.
T Consensus       176 ~~~~~~~~~~~~~~~~~~-~-------~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~s~~~~G~~~  247 (393)
T PRK11195        176 LGARRPGQSWNPIALLRD-F-------FHACRVLWRDKLGRFSLAGTTLFWGAGATLRFLVLAWAPVALGITLNQPAYLQ  247 (393)
T ss_pred             CcccccccCCCHHHHHHH-H-------HHHHHHHHhCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChhHHHHHH
Confidence            433221111111110000 0       01134677888766554444444444556667788899999999999999999


Q ss_pred             hhhHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHhhHHHHHHHHHhhccCchHHHHH-HHHHHHhhhhhhhcchhh
Q 021674          161 VLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSPAMAVL-CMACSQGTDAFSQSGLYS  239 (309)
Q Consensus       161 ~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~  239 (309)
                      ....+++.++++..+++.||.++|+.       ..  .++... .........++++.... ....+.+.+.. .....+
T Consensus       248 ~~~~~g~i~g~~~~~~l~~~~~~~~~-------~~--~g~~~~-~~~~~~~~~~~~~~~~~~~~~~G~~~g~~-~~~~~~  316 (393)
T PRK11195        248 AVVAIGIAVGAGAAARLVTLETVLRV-------LP--AGILMG-LVVLLMALQHSLLPAYPLLILIGALGGFF-VVPMNA  316 (393)
T ss_pred             HHHHHHHHHHHHHHHHHhcCCcccch-------HH--HHHHHH-HHHHHHHHHhHHHHHHHHHHHHHHhhhhh-hhhHHH
Confidence            99999999999999999888665421       11  111111 11111111222332222 22233322222 222333


Q ss_pred             hhhccCCC-c-hHHHHHHHhHhHhhhhhHHHhHHHhhcccCCchHHHHHHHHHHHHHHHHHHhh---cCCccccC
Q 021674          240 NHQDIAPR-Y-SGVLLGLSNTAGVLAGVFGTAATGYILQHGSWDDVFKVSVGLYLVGTAVWNLF---STGEKVVD  309 (309)
Q Consensus       240 ~~~~~~~~-~-~g~a~~~~~~~~~lgg~i~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~  309 (309)
                      ..++.+|+ . +|.+.++.|+.++++..++..+.+.+ +..+.+..+.+....++++....+.|   .+.++.+|
T Consensus       317 ~~q~~~~~~~~~g~~~a~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  390 (393)
T PRK11195        317 LLQHRGHVLVGAGHSIAVQNFNENLAMLLMLGLYSLL-VKLGVPVVAVIVGFGLLVALAMALLWRWHRRNQRQFD  390 (393)
T ss_pred             HHHhhCcccccchhHHHHHhHHHHHHHHHHHHHHHHH-HHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcccccc
Confidence            33444554 3 69999999999999999999998865 56667777777666666666665555   34444444

>TIGR00879 SP MFS transporter, sugar porter (SP) family

Probab=99.89  E-value=7.6e-22  Score=184.29  Aligned_cols=292  Identities=15%  Similarity=0.116  Sum_probs=174.2

Q ss_pred             CCcccccchhhHHHHHhccCCCcchhHHHHHHHhhhhhHHHHhhhhH---HHHhhhcCCcchhHhhhhHHHHHHHHHHhh
Q 021674            1 MGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFS---PFLIHRFGWPSVFYSFGSLGTVWFTVWLSK   77 (309)
Q Consensus         1 ~Gig~g~~~p~~~~~i~~~~p~~~rg~~~g~~~~~~~~g~~lg~~l~---~~l~~~~gWr~~F~i~~~~~~v~~~~~~~~   77 (309)
                      +|+|.|...+....+++|++|+++|++++++.+.+.++|..+++.++   ....+..|||+.|++.++..++. .+....
T Consensus       137 ~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~w~~~f~~~~~~~~~~-~~~~~~  215 (481)
T TIGR00879       137 LGIGVGIASALVPMYLSEIAPKALRGALTSLYQLAITFGILVAYGFGSGKVSLNNTLGWRIPLGLQLIPAGLL-FLGLFF  215 (481)
T ss_pred             HHhhhhHHHhHHHHHHHccCChhhhhhhhhHHHHHHHHHHHHHHHHHHHhhcCCCCccHHHHHHHHHHHHHHH-HHHHhc
Confidence            58899999999999999999999999999999999999999999999   77777889999999855544443 233334


Q ss_pred             cccCCCCC--CCCCHHHHHHHHhccCCCCC--------------------CCCCChhHhhcc------hHHHHHHHHHHH
Q 021674           78 AHSSPAED--PQLRPAEKKLIVSSCASKEP--------------------VKTIPWGLILSK------PPVWALIVSHFC  129 (309)
Q Consensus        78 ~~~~p~~~--~~~~~~~~~~~~~~~~~~~~--------------------~~~~~~~~l~~~------~~~~~~~~~~~~  129 (309)
                      .+|+|+..  ++..+++++...+....+++                    ..+..++++++.      +.++......+.
T Consensus       216 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  295 (481)
T TIGR00879       216 LPESPRWLVGKGRVEEARKSLARLRGTSGEDKELLDELELIDIKRSIEKRSVQPSWGSLFSSTRRIRRRLFLGVVLQWFQ  295 (481)
T ss_pred             CCCChHHHHHcCChHHHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHHhhccccHHHHHhcCchhHHHHHHHHHHHHHH
Confidence            55554310  00001100000000000000                    000112233321      222222222232


Q ss_pred             HHHHHHHHHHhHHHHHHHHhCCCccchhhHhhhhHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHhhHHHHHHHHH
Q 021674          130 HNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQ  209 (309)
Q Consensus       130 ~~~~~~~~~~wlp~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~~~~~~~~~~~~~  209 (309)
                      .........+|.|.+++ ++|++..+.+....+..++..++.+++|+++||+++|+....       .............
T Consensus       296 ~~~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~-------~~~~~~~~~~~~~  367 (481)
T TIGR00879       296 QFTGINAIMYYSPTIFE-NAGVSTDHAFLVSIIVGAVNFAFTFVAIFLVDRFGRRPLLLI-------GAAGMAICLFVLG  367 (481)
T ss_pred             HHhCCeehHHHHHHHHH-HcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHH-------HHHHHHHHHHHHH
Confidence            22233445667776665 579999888888888899999999999999999987642111       1111111111111


Q ss_pred             ---hhccCc-----hHHHH-HHHHHHHhhhhhhhcchhhhhhcc-CCCchHHHHHHHhHhHhhhhhHHHhHHHhhcccCC
Q 021674          210 ---LSHVDS-----PAMAV-LCMACSQGTDAFSQSGLYSNHQDI-APRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGS  279 (309)
Q Consensus       210 ---~~~~~~-----~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~a~~~~~~~~~lgg~i~~~~~g~l~~~~~  279 (309)
                         ....+.     ....+ .......+......+.......|. +++.++.+.++.+...+++++++|.+.+.+.++.+
T Consensus       368 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~lg~~i~~~~~~~~~~~~~  447 (481)
T TIGR00879       368 ILGASFVTGSSKSSGNVAIVFILLFIAFFAMGWGPVPWVIVSEIFPLSLRPKGISIAVAANWLANFIVGFLFPTMLESIG  447 (481)
T ss_pred             HHhhcccCCcccchhHHHHHHHHHHHHHHHccccCeehhhhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence               111111     11111 111111111111111122222344 44679999999999999999999999999999878


Q ss_pred             chHHHHHHHHHHHHHHHHHHhh
Q 021674          280 WDDVFKVSVGLYLVGTAVWNLF  301 (309)
Q Consensus       280 ~~~~~~~~~~~~~~~~~~~~~~  301 (309)
                      |...|++.+++.+++++...++
T Consensus       448 ~~~~f~~~~~~~~~~~i~~~~~  469 (481)
T TIGR00879       448 VGGVFIFFGGLNVLGLIFVYFF  469 (481)
T ss_pred             ccceehhHHHHHHHHHHHHhee
Confidence            8888888777777766665544

This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)

>TIGR00891 2A0112 putative sialic acid transporter

Probab=99.89  E-value=6.9e-22  Score=181.24  Aligned_cols=275  Identities=14%  Similarity=0.110  Sum_probs=166.9

Q ss_pred             CCcccccchhhHHHHHhccCCCcchhHHHHHHHhhhhhHHHHhhhhHHHHhhhcC--CcchhHhhhhHHHHHHHHHHhhc
Q 021674            1 MGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFG--WPSVFYSFGSLGTVWFTVWLSKA   78 (309)
Q Consensus         1 ~Gig~g~~~p~~~~~i~~~~p~~~rg~~~g~~~~~~~~g~~lg~~l~~~l~~~~g--Wr~~F~i~~~~~~v~~~~~~~~~   78 (309)
                      +|++.+...|...+++.|++|++||+++.++.+++.++|.++++.+++.+.++.+  ||+.|++.++..++. .......
T Consensus       110 ~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~~~w~~~f~~~~~~~~~~-~~~~~~~  188 (405)
T TIGR00891       110 IGIGMGGEYGSSAAYVIESWPKHLRNKASGLLISGYAVGAVVAAQVYSLVVPVWGDGWRALFFISILPIIFA-LWLRKNI  188 (405)
T ss_pred             HHhhhhhhhHHHHHHHHHhCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHH-HHHHHhC
Confidence            4788999999999999999999999999999999999999999999999998876  999999755444433 2333334


Q ss_pred             ccCCCCCCCCCHHH--HHHHHhccCCCCCCCCCChh----Hhh-cchH----HHHHHHHHHHHHHHHHHHHHhHHHHHHH
Q 021674           79 HSSPAEDPQLRPAE--KKLIVSSCASKEPVKTIPWG----LIL-SKPP----VWALIVSHFCHNWGTFILLTWMPTYYNQ  147 (309)
Q Consensus        79 ~~~p~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~----~l~-~~~~----~~~~~~~~~~~~~~~~~~~~wlp~~l~~  147 (309)
                      ||+++.+++.++++  ++...+ ..++++..+.+.+    ... +.++    +........+.+...+...+|+|.|+++
T Consensus       189 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  267 (405)
T TIGR00891       189 PEAEDWKEKHAGKALVRTMVDI-LYGGEHRIANIVMTLAAAMVQSAGKRWPTFVYLVVLVLFANLYSHPIQDLLPTYLKA  267 (405)
T ss_pred             CCChhHHHHhhhhhhhhhHHHH-HhccchhhhhhhhhhhHHhhhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhHHHHHH
Confidence            44332111000000  000000 0000000000000    001 1111    1222333333344556777899999999


Q ss_pred             HhCCCccchhhHhhhhHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHhhHHHHHHHHHhhccCchHHHHHH-HHHH
Q 021674          148 VLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSPAMAVLC-MACS  226 (309)
Q Consensus       148 ~~g~s~~~~g~~~~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~  226 (309)
                      ++|++..+.+.+.....++..+++++.|+++||+++|+....        ................++....... ...+
T Consensus       268 ~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  339 (405)
T TIGR00891       268 DLGLSPHTVANIVVFSNIGAIVGGCVFGFLGDWLGRRKAYVC--------SLLAGQLLIIPVFAIGANVAVLGLGLFFQQ  339 (405)
T ss_pred             HhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchhhhHH--------HHHHHHHHHHHHHHhCCchHHHHHHHHHHH
Confidence            999999999999999999999999999999999987642111        1111101111111112222221111 1111


Q ss_pred             Hhhhhhhhcchhhhhh-ccCCCchHHHHHHHhHhHhhhhhHHHhHHHhhcccCC-chHHHHH
Q 021674          227 QGTDAFSQSGLYSNHQ-DIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGS-WDDVFKV  286 (309)
Q Consensus       227 ~~~~~~~~~~~~~~~~-~~~~~~~g~a~~~~~~~~~lgg~i~~~~~g~l~~~~~-~~~~~~~  286 (309)
                      ...... .+....... ..++++++.+.|+.+...++++.++|.+.|++.|+.+ |+..+..
T Consensus       340 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~g~~~~g~l~~~~g~~~~~~~~  400 (405)
T TIGR00891       340 MLVQGI-WGILPKHLGEYFPTDQRAAGLGFTYQLGNLGGALAPIIGALLAQRLDEYGTALAS  400 (405)
T ss_pred             HHHccc-hhhHHHHHhhhCCcchhHHHhhHHHHHHHHHHHHHHHHHHHHHHhccccchhHHh
Confidence            111111 111112222 3456789999999999999999999999999999855 7765554

>TIGR00887 2A0109 phosphate:H+ symporter

Probab=99.89  E-value=2.6e-21  Score=183.34  Aligned_cols=296  Identities=14%  Similarity=0.120  Sum_probs=171.9

Q ss_pred             CCcccccchhhHHHHHhccCCCcchhHHHHHHHhhhhhHHHHhhhhHHHHhh-----------------------hcCCc
Q 021674            1 MGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIH-----------------------RFGWP   57 (309)
Q Consensus         1 ~Gig~g~~~p~~~~~i~~~~p~~~rg~~~g~~~~~~~~g~~lg~~l~~~l~~-----------------------~~gWr   57 (309)
                      +|++.|+..|....+++|++|+|+|++++++......+|..+++.++.++.+                       .++||
T Consensus       125 ~G~~~g~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~WR  204 (502)
T TIGR00887       125 LGVGIGGDYPLSAIITSEFATKKWRGAMMAAVFAMQGFGILAGAIVALIVLAGFKHSLEAAADEASCTGSCVPAVDYMWR  204 (502)
T ss_pred             HHHHHhhhhHHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccccccccccccchhcccHH
Confidence            4889999999999999999999999999999999999999999988876543                       24899


Q ss_pred             chhHhhhhHHHHHHHHHHhhcccCCCC---CCCCCHHHHHHHH-h---c-c-CCCC------CC--CCCChhHhhcch--
Q 021674           58 SVFYSFGSLGTVWFTVWLSKAHSSPAE---DPQLRPAEKKLIV-S---S-C-ASKE------PV--KTIPWGLILSKP--  118 (309)
Q Consensus        58 ~~F~i~~~~~~v~~~~~~~~~~~~p~~---~~~~~~~~~~~~~-~---~-~-~~~~------~~--~~~~~~~l~~~~--  118 (309)
                      ++|.+.++++++. .++.+..||+|+.   +.+.++++++... .   + . ..++      +.  .+.+++++++++  
T Consensus       205 ~~~~~~~ip~~i~-~~~~~~lpESpr~l~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~  283 (502)
T TIGR00887       205 ILIGFGAVPALLA-LYFRLTIPETPRYTADVAKDVEQAASDMSAVLQVKIEAEPDEVEKASTAVEVPKASWSDFFTHFFK  283 (502)
T ss_pred             HHHHHHHHHHHHH-HHHHHhCCCCHHHHHHhCcchHHHHHHHHHHhccccccCcccccchhccccchhhhHHHHHHHHhh
Confidence            9998766555543 3444567888873   1111111111111 0   0 0 0000      00  112466776532  


Q ss_pred             -HHHHH----HHHHHHHHHHHHHHHHhHHHHHHHHhCCCccchhh------------HhhhhHHHHHHHHHHHHHHHHHH
Q 021674          119 -PVWAL----IVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGL------------FCVLPWLTMAFSANLGGWIADTL  181 (309)
Q Consensus       119 -~~~~~----~~~~~~~~~~~~~~~~wlp~~l~~~~g~s~~~~g~------------~~~~~~~~~~ig~~~~G~l~dr~  181 (309)
                       +.++.    ....++....+|+...|.|+++++ .|++..+++.            ...+..++..++.++.++++||+
T Consensus       284 ~~~~~~~~~~~~~~~~~~~~~y~~~~~~p~i~~~-~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~l~dr~  362 (502)
T TIGR00887       284 WRHGKHLLGTAGSWFLLDIAFYGVNLNQKVILSA-IGYSPPAATNNAYEELYKTAVGNLIIALAGTVPGYWVTVFLVDII  362 (502)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHccccccHHHHHH-HcCCCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh
Confidence             22221    222344455678889999999964 6887654321            12333445667888999999999


Q ss_pred             HHcCCChhhHHHHHHHHhhHHHHHHHHHhh-ccCc-hHHHHHHHHHHH-hhhhhhhcchhhhhhccC-CCchHHHHHHHh
Q 021674          182 VSKGLSVTTVRKIMQSIGFLGPAFFLTQLS-HVDS-PAMAVLCMACSQ-GTDAFSQSGLYSNHQDIA-PRYSGVLLGLSN  257 (309)
Q Consensus       182 ~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~-~~~~g~a~~~~~  257 (309)
                      |||+.....      .+........+.... .... ......+....+ +.+.  .+..+....|.. ++.|+.+.++.+
T Consensus       363 gRR~~l~~~------~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~E~~p~~~R~~~~g~~~  434 (502)
T TIGR00887       363 GRKPIQLMG------FFILTVLFFVLGFAYNHLSTHGFLAIYVLAQFFANFGP--NATTFIVPGEVFPTRYRSTAHGISA  434 (502)
T ss_pred             cchhHHHHH------HHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHhcCC--CchhhhhhhccCchhHHHHHHHHHH
Confidence            987422110      000000111111111 1111 111111111111 1111  111222234444 467999999999


Q ss_pred             HhHhhhhhHHHhHHHhhcccC----------CchHHHHHHHHHHHHHHHHHHh-hcCCcc
Q 021674          258 TAGVLAGVFGTAATGYILQHG----------SWDDVFKVSVGLYLVGTAVWNL-FSTGEK  306 (309)
Q Consensus       258 ~~~~lgg~i~~~~~g~l~~~~----------~~~~~~~~~~~~~~~~~~~~~~-~~~~~~  306 (309)
                      ..++++++++|.+.+++.|..          ++...|.+.+++.+++.+.+.+ ..|+++
T Consensus       435 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~i~~~~lpEt~~~  494 (502)
T TIGR00887       435 ASGKAGAIIGQFGFLYLAQHGDPTKGYPTGIWMGHVLEIFALFMFLGILFTLLIPETKGK  494 (502)
T ss_pred             HHhhhHHHHHHHHhhhhhccccccccccccccchHHHHHHHHHHHHHHHHheEeccCCCC
Confidence            999999999999999999852          2345666666666655444332 344443

This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).

>PRK12382 putative transporter; Provisional

Probab=99.89  E-value=3.3e-21  Score=176.90  Aligned_cols=266  Identities=14%  Similarity=0.138  Sum_probs=169.5

Q ss_pred             CCcccccchhhHHHHHhccCCCcchhHHHHHHHhhhhhHHHHhhhhHHHHhhhcCCcchhHhhhhHHHHHHHHHHhhccc
Q 021674            1 MGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVWLSKAHS   80 (309)
Q Consensus         1 ~Gig~g~~~p~~~~~i~~~~p~~~rg~~~g~~~~~~~~g~~lg~~l~~~l~~~~gWr~~F~i~~~~~~v~~~~~~~~~~~   80 (309)
                      ||++.+...|+..+++.|++|+|||++++++.+.+.+.|..+|+++++++.+++|||+.+.+..++.++.. ...++.+|
T Consensus       122 ~G~~~~~~~~~~~~~~~~~~~~~~r~~a~~~~~~~~~~g~~~g~~~~~~l~~~~g~~~~~~~~~~~~~~~~-~~~~~~~~  200 (392)
T PRK12382        122 LGFGESQLLTGALTWGLGLVGPKHSGKVMSWNGMAMYGALAAGAPLGLLLHSHFGFAALALTTMVLPLLAW-AFNGTVRK  200 (392)
T ss_pred             HHHHHHHHHHHHHHHHHhhCCccccchhhhHHHHHHHHHHHHHHHHHHHHHhccChHHHHHHHHHHHHHHH-HHHHhccC
Confidence            57888888999999999999999999999999999999999999999999999999998876554443322 22222222


Q ss_pred             CCCCCCCCCHHHHHHHHhccCCCCCCCCCChhHhhcchHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhCCCccchhhHh
Q 021674           81 SPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFC  160 (309)
Q Consensus        81 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~wlp~~l~~~~g~s~~~~g~~~  160 (309)
                      +++++     +           +    +.+.++.+|  ..|.......+..........|.|.|+++ .|++  +.+...
T Consensus       201 ~~~~~-----~-----------~----~~~~~~~~~--~~~~~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~--~~~~~~  255 (392)
T PRK12382        201 VPAHA-----G-----------E----RPSLWSVVG--LIWKPGLGLALQGVGFAVIGTFVSLYFAS-KGWA--MAGFTL  255 (392)
T ss_pred             CCCCc-----c-----------c----CchHHHHHH--HHHHhHHHHHHHHHHHhHHHHHHHHHHHh-cCCc--hhHHHH
Confidence            11100     0           0    001122221  12221122233334556677899999976 4664  456666


Q ss_pred             hhhHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHhhHHHHHHHHHhhccCchHHHHH-HHHHHHhhhhhhhcchhh
Q 021674          161 VLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSPAMAVL-CMACSQGTDAFSQSGLYS  239 (309)
Q Consensus       161 ~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~  239 (309)
                      ....++..++.+..|++.||+++|+....       ............  ...++...... ....+.+.+. ..+....
T Consensus       256 ~~~~~~~~~~~~~~g~l~~r~g~~~~~~~-------~~~~~~~~~~~~--~~~~~~~~~~~~~~l~g~~~~~-~~~~~~~  325 (392)
T PRK12382        256 TAFGGAFVLMRVLFGWMPDRFGGVKVAIV-------SLLVETVGLLLL--WLAPTAWVALAGAALTGAGCSL-IFPALGV  325 (392)
T ss_pred             HHHHHHHHHHHHHHHHHHHhcCCCeehHH-------HHHHHHHHHHHH--HHcccHHHHHHHHHHHHHHHHh-HHHHHHH
Confidence            66677788899999999999987643211       111111111111  12223332222 2222222211 1121222


Q ss_pred             h-hhccCCCchHHHHHHHhHhHhhhhhHHHhHHHhhcccCCchHHHHHHHHHHHHHHHHHHhhc
Q 021674          240 N-HQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSWDDVFKVSVGLYLVGTAVWNLFS  302 (309)
Q Consensus       240 ~-~~~~~~~~~g~a~~~~~~~~~lgg~i~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~  302 (309)
                      . .+..+++++|.+.++.+...++++.++|.+.|.+.|+.+|+..|.+.+.+.+++.+....+.
T Consensus       326 ~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~  389 (392)
T PRK12382        326 EVVKRVPSQVRGTALGGYAAFQDIAYGVSGPLAGMLATSFGYPSVFLAGAISAVLGIIVTILSF  389 (392)
T ss_pred             HHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHhhc
Confidence            2 23356688999999999999999999999999999998899999998888877776655444

>TIGR01299 synapt_SV2 synaptic vesicle protein SV2

Probab=99.89  E-value=2.2e-21  Score=188.91  Aligned_cols=295  Identities=14%  Similarity=0.107  Sum_probs=177.0

Q ss_pred             CCcccccchhhHHHHHhccCCCcchhHHHHHHHhhhhhHHHHhhhhHHHHhhhc-------------CCcchhHhhhhHH
Q 021674            1 MGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRF-------------GWPSVFYSFGSLG   67 (309)
Q Consensus         1 ~Gig~g~~~p~~~~~i~~~~p~~~rg~~~g~~~~~~~~g~~lg~~l~~~l~~~~-------------gWr~~F~i~~~~~   67 (309)
                      +|+|.|+..|....+++|++|+++||+.++++.+...+|.++++.++.++.+++             +||+.|++.+++.
T Consensus       265 ~G~g~g~~~p~~~~~isE~~p~~~Rg~~~g~~~~~~~iG~ila~~la~~il~~~G~~~~~g~~~~~~gWR~l~~i~~lp~  344 (742)
T TIGR01299       265 SGFGIGGAIPIVFSYFAEFLAQEKRGEHLSWLCMFWMIGGIYAAAMAWAIIPHYGWSFQMGSAYQFHSWRVFVIVCAFPC  344 (742)
T ss_pred             HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhccccccccccHHHHHHHHHHHH
Confidence            478899999999999999999999999999999999999999999887777654             5889888766555


Q ss_pred             HHHHHHHHhhcccCCCCCCC-CCHHHH-HHHH-----------------------hccCCC-----CCCCC---------
Q 021674           68 TVWFTVWLSKAHSSPAEDPQ-LRPAEK-KLIV-----------------------SSCASK-----EPVKT---------  108 (309)
Q Consensus        68 ~v~~~~~~~~~~~~p~~~~~-~~~~~~-~~~~-----------------------~~~~~~-----~~~~~---------  108 (309)
                      ++. ++..+..||+|+.... .+.++. +.++                       .....+     +....         
T Consensus       345 ll~-ll~~~~lPESPrwL~~~gr~~eA~~iL~~i~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  423 (742)
T TIGR01299       345 VFA-IGALTFMPESPRFFLENGKHDEAWMILKLIHDTNMRAKGHPEKVFSVNHIKTIHQEDELIEIESDTGTWYQRCFVR  423 (742)
T ss_pred             HHH-HHHHHHcCCCHHHHHHCCCHHHHHHHHHHHhcCCCCCcCchhHHHHHHHHHHhhhhhhhhcccccccchhhcchhh
Confidence            443 3444557888753110 000000 0000                       000000     00000         


Q ss_pred             ---------CChhHhhcchH---HHHHHHHHHHHHHHHHHHHHhHHHHHHHH----h-----------------------
Q 021674          109 ---------IPWGLILSKPP---VWALIVSHFCHNWGTFILLTWMPTYYNQV----L-----------------------  149 (309)
Q Consensus       109 ---------~~~~~l~~~~~---~~~~~~~~~~~~~~~~~~~~wlp~~l~~~----~-----------------------  149 (309)
                               .+++.+|+.|.   .+.+++..++..+++|++.+|+|.++++.    +                       
T Consensus       424 ~~~~~~~~~~~~~~lf~~~~~~~tl~l~~~wf~~~~~yygl~~w~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  503 (742)
T TIGR01299       424 ALSEGGGIWGNFLRCFNPEVREITIKLMGVWFTLSFGYYGLSVWFPDMIKHLQADDYAALTKNFPGDKVAHFSFNFTLEN  503 (742)
T ss_pred             hhhhhhhHHHHHHHHcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccchhccccccchhh
Confidence                     02344554433   34456677888889999999999987541    0                       


Q ss_pred             --------------CCCc--------------------------------------------------------------
Q 021674          150 --------------HFNL--------------------------------------------------------------  153 (309)
Q Consensus       150 --------------g~s~--------------------------------------------------------------  153 (309)
                                    |+..                                                              
T Consensus       504 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c  583 (742)
T TIGR01299       504 QIHRGGEYDNDKFIGLKFKSVSFEDSLFEECTFDDVTSSNTFFKNCTFIDTLFENTDFEEYKFIDSEFQNCSFLHNKEGC  583 (742)
T ss_pred             hhccccccccchhhcccccccccccccccccceeeccccchhhhccchhhhhccccchhhhhhhhhhhhhccccccCCcc
Confidence                          0000                                                              


Q ss_pred             -----------cchhhHhhhhHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHhhHHHHHHHHHhhccCchHHHHH-
Q 021674          154 -----------TESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSPAMAVL-  221 (309)
Q Consensus       154 -----------~~~g~~~~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-  221 (309)
                                 ........+..++..++.+++|+++||+|||+.         +..++++.+++........+....+. 
T Consensus       584 ~~~~~~~~~~~~~~~~~~~l~~l~~i~G~il~g~L~Dr~GRr~~---------l~~~~~lsai~~ll~~~~~s~~~ll~~  654 (742)
T TIGR01299       584 PIDFDGDDEGAYMIYFVNFLGTLAVLPGNIVSALLMDKIGRLRM---------LAGSMVLSCISCFFLSFGNSESAMIAL  654 (742)
T ss_pred             CccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHH---------HHHHHHHHHHHHHHHHHHccHHHHHHH
Confidence                       001223445567889999999999999997631         12222222222222222222222222 


Q ss_pred             HHHHHHhhhhhhhcchhhhhhccCC-CchHHHHHHHhHhHhhhhhHHHhHHHhhcccCCchHHHHHHHHHHHHHHHHH-H
Q 021674          222 CMACSQGTDAFSQSGLYSNHQDIAP-RYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSWDDVFKVSVGLYLVGTAVW-N  299 (309)
Q Consensus       222 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~a~~~~~~~~~lgg~i~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~-~  299 (309)
                      ..+.++.... ..+..+....|..| +.|+++.|+.++.+++|++++|.++|.+.+.. ....|.+.+++.+++++.. .
T Consensus       655 ~~l~g~~~~~-~~~~~~a~~aEl~Pt~~Rgta~Gi~~~~~rlGaiigp~i~g~L~~~~-~~~pf~i~a~~lll~~ll~~~  732 (742)
T TIGR01299       655 LCLFGGLSIA-AWNALDVLTVELYPSDKRATAFGFLNALCKAAAVLGILIFGSFVGIT-KAAPILFASAALACGGLLALK  732 (742)
T ss_pred             HHHHHHHHHH-HHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh-hHHHHHHHHHHHHHHHHHHHh
Confidence            1112221111 12223333445545 67999999999999999999999999888753 4556666665655554433 3


Q ss_pred             hhcCCccc
Q 021674          300 LFSTGEKV  307 (309)
Q Consensus       300 ~~~~~~~~  307 (309)
                      +..|+++.
T Consensus       733 LPET~~~~  740 (742)
T TIGR01299       733 LPDTRGQV  740 (742)
T ss_pred             CCCCcccc
Confidence            34555443

This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.

>PRK15403 multidrug efflux system protein MdtM; Provisional

Probab=99.89  E-value=5e-21  Score=177.07  Aligned_cols=268  Identities=9%  Similarity=0.006  Sum_probs=169.4

Q ss_pred             CCcccccchhhHHHHHhccCCCcchhHHHHHHHhhhhhHHHHhhhhHHHHhhhcCCcchhHhhhhHHHHHHHHHHhhccc
Q 021674            1 MGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVWLSKAHS   80 (309)
Q Consensus         1 ~Gig~g~~~p~~~~~i~~~~p~~~rg~~~g~~~~~~~~g~~lg~~l~~~l~~~~gWr~~F~i~~~~~~v~~~~~~~~~~~   80 (309)
                      ||++++...+....++.|++|++||++++++++.+.++|..+|+.+++.+.+++|||+.|++.++++++..+......||
T Consensus       114 ~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lg~~l~~~~gw~~~f~~~~~~~~i~~~~~~~~lp~  193 (413)
T PRK15403        114 QGTSICFIATVGYVTVQEAFGQTKGIKLMAIITSIVLVAPIIGPLSGAALMHFVHWKVLFAIIAVMGLIAFVGLLLAMPE  193 (413)
T ss_pred             HHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence            57888877778888999999999999999999999999999999999999999999999999888776654333333454


Q ss_pred             CCCCCCCCCHHHHHHHHhccCCCCCCCCCChhHhhcchHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhCCCccchhhHh
Q 021674           81 SPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFC  160 (309)
Q Consensus        81 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~wlp~~l~~~~g~s~~~~g~~~  160 (309)
                      +++++++ +.+.+.            ...++++++|||++|...+...+.....+.+.++.|.++++.+|+++.+.++..
T Consensus       194 ~~~~~~~-~~~~~~------------~~~~~~~ll~~~~~~~~~l~~~~~~~~~~~~~~~~P~~l~~~~g~s~~~~gl~~  260 (413)
T PRK15403        194 TVKRGAV-PFSAKS------------VLRDFRNVFRNRLFLTGAATLSLSYIPMMSWVAVSPVILIDAGGMTTSQFAWTQ  260 (413)
T ss_pred             CccccCC-CCChHH------------HHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHhChHHHHHhcCCCHHHHHHHH
Confidence            3321100 000000            011356789999999887777777777888889999999999999999999998


Q ss_pred             hhhHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHhhHHHHHHHHHhhccCchHHHHHH-HHHHHhhhhhhhcchhh
Q 021674          161 VLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSPAMAVLC-MACSQGTDAFSQSGLYS  239 (309)
Q Consensus       161 ~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~  239 (309)
                      .+...+..+++.+.+.+.+|..+++. ... ......++.....  .......+........ ...+.+.+. ..+...+
T Consensus       261 ~~~~~~~~i~~~l~~~~~~~~~~~~~-~~~-~~~~~~ig~~l~~--~~~~~~~~~~~~~~~~~~l~~~G~~~-~~p~~~~  335 (413)
T PRK15403        261 VPVFGAVIVANAIVARFVKDPTEPRF-IWR-AVPIQLVGLALLI--VGNLLWPHVWLWSVLGTSLYAFGIGL-IFPTLFR  335 (413)
T ss_pred             HHHHHHHHHHHHHHHHHhccCCchhH-HHH-HHHHHHHHHHHHH--HHHHHccccHHHHHHHHHHHHHHHHH-HhHHHHH
Confidence            77777777777777665543322211 100 0001111111111  1111112222111111 111222211 1122221


Q ss_pred             hhhccCCCchHHHHHHHhHhHhhhhhHHHhHHHhhcccCCchHHHHHH
Q 021674          240 NHQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSWDDVFKVS  287 (309)
Q Consensus       240 ~~~~~~~~~~g~a~~~~~~~~~lgg~i~~~~~g~l~~~~~~~~~~~~~  287 (309)
                      ..........|++.++.+.....+...++...|++.+++ -...|...
T Consensus       336 ~al~~~~~~~G~a~a~~~~~~~~~~~~~~~~~g~~~~~~-~~~~~~~~  382 (413)
T PRK15403        336 FTLFSNNLPKGTVSASLNMVILMVMAVSVEIGRWLWFNG-GRLPFHLL  382 (413)
T ss_pred             HHhccCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHcC-CchHHHHH
Confidence            111112234688999999999899999999999987774 34444443

>PRK09874 drug efflux system protein MdtG; Provisional

Probab=99.88  E-value=5.6e-21  Score=175.90  Aligned_cols=279  Identities=16%  Similarity=0.163  Sum_probs=173.8

Q ss_pred             CcccccchhhHHHHHhccCCCcchhHHHHHHHhhhhhHHHHhhhhHHHHhhhcCCcchhHhhhhHHHHHHHHHHhhcccC
Q 021674            2 GIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVWLSKAHSS   81 (309)
Q Consensus         2 Gig~g~~~p~~~~~i~~~~p~~~rg~~~g~~~~~~~~g~~lg~~l~~~l~~~~gWr~~F~i~~~~~~v~~~~~~~~~~~~   81 (309)
                      |++. +..|....++.+++|++||+++.++...+.++|..+++++++.+.+++|||+.|++.+++.++..+......+|+
T Consensus       118 g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  196 (408)
T PRK09874        118 GLLG-GFVPNANALIATQVPRNKSGWALGTLSTGGVSGALLGPLAGGLLADSYGLRPVFFITASVLFLCFLVTLFCIREN  196 (408)
T ss_pred             HHhh-hhHHhHHHHHHHhcCHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhccC
Confidence            4443 456788889999999999999999999999999999999999999999999999988776655433333333432


Q ss_pred             CCCCCCCCHHHHHHHHhccCCCCCCCCCChhHhhcchHHHHHH-HHHHHHHHHHHHHHHhHHHHHHHHhCCCcc---chh
Q 021674           82 PAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALI-VSHFCHNWGTFILLTWMPTYYNQVLHFNLT---ESG  157 (309)
Q Consensus        82 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~-~~~~~~~~~~~~~~~wlp~~l~~~~g~s~~---~~g  157 (309)
                      +++++  ++++.+             ..+..+.+|+|+.+... ...++..........++|.|+++..+....   ..+
T Consensus       197 ~~~~~--~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g  261 (408)
T PRK09874        197 FQPVS--KKEMLH-------------MREVVTSLKNPKLVLSLFVTTLIIQVATGSIAPILTLYVRELAGNVSNIAFISG  261 (408)
T ss_pred             ccccc--chhhhH-------------HHHHHHhCcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHH
Confidence            21110  000000             00112345676655432 223333344455668889998875443221   245


Q ss_pred             hHhhhhHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHhhHHHHHHHHHhhccCchHHHH-HHHHHHHhhhhhhhcc
Q 021674          158 LFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSPAMAV-LCMACSQGTDAFSQSG  236 (309)
Q Consensus       158 ~~~~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~  236 (309)
                      .+.....++..++.+..|+++||+++|+...         .......+........++++... .....+.+.+.. .+.
T Consensus       262 ~~~~~~~l~~~~~~~~~g~l~dr~g~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~-~~~  331 (408)
T PRK09874        262 MIASVPGVAALLSAPRLGKLGDRIGPEKILI---------TALIFSVLLLIPMSFVQTPLQLGILRFLLGAADGAL-LPA  331 (408)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhccccchhHH---------HHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhhHhh-HHH
Confidence            5556667788889999999999998764211         11111111111111222333222 222222222211 121


Q ss_pred             hhhhh-hccCCCchHHHHHHHhHhHhhhhhHHHhHHHhhcccCCchHHHHHHHHHHHHHHHHHHhhcCCcc
Q 021674          237 LYSNH-QDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSWDDVFKVSVGLYLVGTAVWNLFSTGEK  306 (309)
Q Consensus       237 ~~~~~-~~~~~~~~g~a~~~~~~~~~lgg~i~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  306 (309)
                      ..... ...+++++|...++.+...++|..++|.+.|.+.|+.+|+..|.+.+++.+++.+......+|++
T Consensus       332 ~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~gp~~~G~l~~~~g~~~~f~~~~~~~l~~~~~~~~~~~~~~  402 (408)
T PRK09874        332 VQTLLVYNSSNQIAGRIFSYNQSFRDIGNVTGPLMGAAISANYGFRAVFLVTAGVVLFNAVYSWNSLRRRR  402 (408)
T ss_pred             HHHHHHHhCCcccceeeehHHHHHHHHHHHhhHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence            22222 23455778999999999999999999999999999988999999888888777766555444443

>PRK11043 putative transporter; Provisional

Probab=99.88  E-value=1.3e-20  Score=173.47  Aligned_cols=258  Identities=13%  Similarity=0.132  Sum_probs=169.7

Q ss_pred             CCcccccchhhHHHHHhccCCCcchhHHHHHHHhhhhhHHHHhhhhHHHHhhhcCCcchhHhhhhHHHHHHHHHHhhccc
Q 021674            1 MGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVWLSKAHS   80 (309)
Q Consensus         1 ~Gig~g~~~p~~~~~i~~~~p~~~rg~~~g~~~~~~~~g~~lg~~l~~~l~~~~gWr~~F~i~~~~~~v~~~~~~~~~~~   80 (309)
                      +|++.+...+...+++.|++|+++|++..+..+...++|..+++.+++++.+++|||+.|++.+.+.++..+..+ ..+|
T Consensus       104 ~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~g~~~~~~~~~~~~~~~~~~~~-~~~~  182 (401)
T PRK11043        104 QAVGVCSAAVIWQALVIDRYPAQKANRVFATIMPLVALSPALAPLLGAWLLNHFGWQAIFATLFAITLLLILPTL-RLKP  182 (401)
T ss_pred             HHhhhHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHH-HcCC
Confidence            467777777888889999999999999999999999999999999999999999999999988777765543332 2333


Q ss_pred             CCCCCCCCCHHHHHHHHhccCCCCCCCCCChhHhhcchHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhCCCccchhhHh
Q 021674           81 SPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFC  160 (309)
Q Consensus        81 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~wlp~~l~~~~g~s~~~~g~~~  160 (309)
                      ++++++    +++             ++.++++++|+|+.+.......+....++.+.+|.|.++++ +|+++.+.++..
T Consensus       183 ~~~~~~----~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~-~g~s~~~~g~~~  244 (401)
T PRK11043        183 SKKARK----QSQ-------------DALTFKQLLKSKTYLGNVLIFAACSAAFFAWLTGSPFILEQ-MGYSPADIGLSY  244 (401)
T ss_pred             CCCccc----cch-------------HHHHHHHHHcChhHHHHHHHHHHHHHHHHHHHHHhHHHHHH-cCCCHHHHHHHH
Confidence            221110    000             01245678889888766655555556677888999999865 799999999888


Q ss_pred             hhhHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHhhHHHHHHHHHhhccCchHHHHH-HHHHHHhhhhhhhcchhh
Q 021674          161 VLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSPAMAVL-CMACSQGTDAFSQSGLYS  239 (309)
Q Consensus       161 ~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~  239 (309)
                      ....++..++..+.+++.||+++|+...    ............+........++...... ....+.+.+.. .+....
T Consensus       245 ~~~~~~~~~g~~~~~~l~~r~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~  319 (401)
T PRK11043        245 VPQTIAFLVGGYGCRAALQKWGGEQLLP----WLLVLFAVSVIAIWLASLLSHPSLVPLLIPFCVMAAANGAI-YPIVVA  319 (401)
T ss_pred             HHHHHHHHHHHHHHHHHHHHcCHHHHHH----HHHHHHHHHHHHHHHHHHhccCcHHHHHHHHHHHHHHHHHH-HHHHHH
Confidence            7778888899999999999987653110    01111111111111111111222222211 11122222111 122222


Q ss_pred             hhhccCCCchHHHHHHHhHhHhhhhhHHHhHHHhhcccCCchH
Q 021674          240 NHQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSWDD  282 (309)
Q Consensus       240 ~~~~~~~~~~g~a~~~~~~~~~lgg~i~~~~~g~l~~~~~~~~  282 (309)
                      ...+..|+++|.+.++.|+.++.++..++.+.|.+.|......
T Consensus       320 ~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~g~l~~~~~~~~  362 (401)
T PRK11043        320 QALRPFPQATGKAAALQNTLQLGLCFLASLLVSALISTPLLTT  362 (401)
T ss_pred             HHhhhCcccChHHHHHHHHHHHHHHHHHHHHHHHccCCChhHH
Confidence            2233456789999999999999999999999999988644433

>PRK10077 xylE D-xylose transporter XylE; Provisional

Probab=99.88  E-value=6.2e-21  Score=179.49  Aligned_cols=291  Identities=14%  Similarity=0.106  Sum_probs=163.2

Q ss_pred             CCcccccchhhHHHHHhccCCCcchhHHHHHHHhhhhhHHHHhhhhHHHHh--------hhcCCcchhHhhhhHHHHHHH
Q 021674            1 MGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLI--------HRFGWPSVFYSFGSLGTVWFT   72 (309)
Q Consensus         1 ~Gig~g~~~p~~~~~i~~~~p~~~rg~~~g~~~~~~~~g~~lg~~l~~~l~--------~~~gWr~~F~i~~~~~~v~~~   72 (309)
                      ||++.|+..|...++++|++|+||||+++++...+..+|.++++.++..+.        +++|||+.|++.+++.++..+
T Consensus       130 ~G~~~g~~~~~~~~~i~e~~~~~~rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~gWr~~f~~~~~~~~~~~~  209 (479)
T PRK10077        130 GGIGVGLASMLSPMYIAEIAPAHIRGKLVSFNQFAIIFGQLVVYFVNYFIARSGDASWLNTDGWRYMFASEAIPALLFLM  209 (479)
T ss_pred             HhhhHhHHhhHHHHHHHhhCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhccCcccccccCChHHHHHHHHHHHHHHHH
Confidence            689999999999999999999999999999999999999999887766543        467999999987776665433


Q ss_pred             HHHhhcccCCCCCC-CCCHHHHHHHHhccCCC-CCCC-CCChhHhhcc-----hHHHH-----H----HHHHHHHHHHHH
Q 021674           73 VWLSKAHSSPAEDP-QLRPAEKKLIVSSCASK-EPVK-TIPWGLILSK-----PPVWA-----L----IVSHFCHNWGTF  135 (309)
Q Consensus        73 ~~~~~~~~~p~~~~-~~~~~~~~~~~~~~~~~-~~~~-~~~~~~l~~~-----~~~~~-----~----~~~~~~~~~~~~  135 (309)
                       .....||+|+... +.++++.+...++.... +..+ ..+.++.+++     +..+.     .    ....+....+.+
T Consensus       210 -~~~~l~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  288 (479)
T PRK10077        210 -LLYFVPETPRYLMSRGKQEQAEGILRKIMGNTLATQALQEIKHSLDHGRKTGGKLLMFGVGVIVIGVMLSVFQQFVGIN  288 (479)
T ss_pred             -HHHcCCCCcHHHHHcCCHHHHHHHHHHHcCChhHHHHHHHHHHHHHHhhhhhhhhcchhHHHHHHHHHHHHHHHHhChh
Confidence             3334577664211 11111111111100000 0000 0001111110     11100     0    011111122334


Q ss_pred             HHHHhHHHHHHHHhCCCccchhhHhhhhHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHhhHHHHHHHHHhhccCc
Q 021674          136 ILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDS  215 (309)
Q Consensus       136 ~~~~wlp~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  215 (309)
                      ...+|.|.++++ .|++..+......+..+...++.+++|+++||++||+.....      ........+.+......+.
T Consensus       289 ~~~~~~p~i~~~-~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~r~~~i~~------~~~~~v~~~~l~~~~~~~~  361 (479)
T PRK10077        289 VVLYYAPEIFKT-LGASTDIALLQTIIVGVINLTFTVLAIMTVDKFGRKPLQIIG------ALGMAIGMFSLGTAFYTQA  361 (479)
T ss_pred             HHHHHHHHHHHH-cCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhcChHHHHHh------HHHHHHHHHHHHHHHhcCc
Confidence            556677887754 799888788777788889999999999999999876422110      0111111111111111111


Q ss_pred             hH-HHHHHH-HHHHhhhhhhhcchhhhhhcc-CCCchHHHHHHHhHhHhhhhhHHHhHHHhhc------ccCCchHHHHH
Q 021674          216 PA-MAVLCM-ACSQGTDAFSQSGLYSNHQDI-APRYSGVLLGLSNTAGVLAGVFGTAATGYIL------QHGSWDDVFKV  286 (309)
Q Consensus       216 ~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~~-~~~~~g~a~~~~~~~~~lgg~i~~~~~g~l~------~~~~~~~~~~~  286 (309)
                      .. ....++ ..+.+......+..+....|. +++.|+.+.|+.+..+++++++++.+.+.+.      |+.++...|.+
T Consensus       362 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~  441 (479)
T PRK10077        362 PGIVALLSMLFYVAAFAMSWGPVCWVLLSEIFPNAIRGKALAIAVAAQWIANYFVSWTFPMMDKNSWLVAHFHNGFSYWI  441 (479)
T ss_pred             ccHHHHHHHHHHHHHHhccccchhHHHhHhhCChhHHHHHHHHHHHHHHHHHHHHHHHhHHHHhccchhhhccCccHHHH
Confidence            11 211111 111111111011222333344 4578999999999999999999876665443      45556667776


Q ss_pred             HHHHHHHHHHHHH
Q 021674          287 SVGLYLVGTAVWN  299 (309)
Q Consensus       287 ~~~~~~~~~~~~~  299 (309)
                      .+++.+++.+...
T Consensus       442 ~~~~~~~~~~~~~  454 (479)
T PRK10077        442 YGCMGVLAALFMW  454 (479)
T ss_pred             HHHHHHHHHHHHH
Confidence            6655555544433

>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]

Probab=99.88  E-value=9.9e-21  Score=165.12  Aligned_cols=273  Identities=16%  Similarity=0.198  Sum_probs=192.8

Q ss_pred             CcccccchhhHHHHHhccCCCcchhHHHHHHHhhhhhHHHHhhhhHHHHhhhc-CCcchhHhhhhHHHHHHHHHHhhccc
Q 021674            2 GIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRF-GWPSVFYSFGSLGTVWFTVWLSKAHS   80 (309)
Q Consensus         2 Gig~g~~~p~~~~~i~~~~p~~~rg~~~g~~~~~~~~g~~lg~~l~~~l~~~~-gWr~~F~i~~~~~~v~~~~~~~~~~~   80 (309)
                      |.|.+.......+++.+.|| ||-+..+|+++.+.++|+.+++.+...+.++. |||......+.++++.++.|++.. .
T Consensus       110 G~gIav~nVLLPslIK~~Fp-k~~~~mtglYs~sl~~~aaLaa~lavpla~~~~gW~~aL~~WAl~allAl~~WlPq~-~  187 (395)
T COG2807         110 GAGIAVINVLLPSLIKRDFP-KRVGLMTGLYSTSLGAGAALAAALAVPLAQHSGGWRGALGFWALLALLALLIWLPQA-L  187 (395)
T ss_pred             HhhHHHHHHhhhHHHHhhcc-cchhhHHhHHHHHHHHHHHHHhhhhhHHHHhhccHHHHHHHHHHHHHHHHHHHhhhc-c
Confidence            44555556666778889999 66899999999999999999999999999987 799999999999988877777542 1


Q ss_pred             CCCCCCCCCHHHHHHHHhccCCCCCCCCCChhHhhcchHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhCCCccchhhHh
Q 021674           81 SPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFC  160 (309)
Q Consensus        81 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~wlp~~l~~~~g~s~~~~g~~~  160 (309)
                      +++ .    +.+        ..+    ..+.+.++|||..|.+.+.+-+.+..+|..+.|+|.+++| +|+|..++|.+.
T Consensus       188 r~~-~----~~~--------~~~----~~~~~~vw~~~~aW~vtLfmGlqS~~~Y~~~~WLP~ili~-~G~sa~~aG~ll  249 (395)
T COG2807         188 REQ-A----ASI--------ATK----LVSVRKVWRSPLAWQVTLFMGLQSLLYYIVIGWLPAILID-RGLSAAEAGSLL  249 (395)
T ss_pred             ccc-c----ccc--------ccc----cccccccccCchhHHHHHHHHhhHHHHHHHHHHHHHHHHH-cCCCHHHhhhHH
Confidence            110 0    000        000    1122458999999999999999999999999999999986 699999999999


Q ss_pred             hhhHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHhhHHHHHHHHHhhccCchHHHHHHHHHHHhhh-hhhhcchhh
Q 021674          161 VLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSPAMAVLCMACSQGTD-AFSQSGLYS  239 (309)
Q Consensus       161 ~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~  239 (309)
                      +...+.....+++..++.+|...++....      ....+....++-........+++..  +..+.+.+ .+.......
T Consensus       250 sl~~l~~~~~~ll~P~la~R~~n~r~~~~------~~~~~~l~G~~G~~~~P~~~~~lw~--~llG~G~G~~F~laL~li  321 (395)
T COG2807         250 SLMQLAQLPTALLIPLLARRSKNQRPLVV------LALLLMLVGLVGLLLAPGQLPILWA--LLLGLGQGGAFPLALTLI  321 (395)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhcccchHHH------HHHHHHHHHHHHHHHhhhhHHHHHH--HHHhCccchHHHHHHHHH
Confidence            99999999999999999999654432111      1111111111111122223333332  22333321 222222222


Q ss_pred             hhhccCCCchHHHHHHHhHhHhhhhhHHHhHHHhhccc-CCchHHHHHHHHHHHHHHHHHHhhc
Q 021674          240 NHQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQH-GSWDDVFKVSVGLYLVGTAVWNLFS  302 (309)
Q Consensus       240 ~~~~~~~~~~g~a~~~~~~~~~lgg~i~~~~~g~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~  302 (309)
                      ..+..+|++.+.-++..+.++|+-+++||.+.|++-|. ++|+..+...+.+.+...+.-+...
T Consensus       322 ~~rs~~a~~Aa~LSgmaQg~GYllAa~GP~l~G~lhDa~gsw~~~~~~l~~~~i~m~i~Gl~a~  385 (395)
T COG2807         322 LLRSSDAAIAAALSGMAQGVGYLLAAFGPWLFGFLHDATGSWSAPLVLLALATLLMLIFGLRAG  385 (395)
T ss_pred             HhhcCChHHHHHHHHHhhhhhHHHHhhhhhhHhHHHHhcCChHHHHHHHHHHHHHHHHHHhhcc
Confidence            33445678888999999999999999999999999998 8899888777766655554434444

>PRK11902 ampG muropeptide transporter; Reviewed

Probab=99.88  E-value=2.1e-20  Score=172.27  Aligned_cols=272  Identities=14%  Similarity=0.122  Sum_probs=165.7

Q ss_pred             cccchhhHHHHHhccCCCcchhHHHHHHHhhhhhHHHHhhhhHHHHhhh-cCCcchhHhhhhHHHHHHHHHHhhcccCCC
Q 021674            5 EGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHR-FGWPSVFYSFGSLGTVWFTVWLSKAHSSPA   83 (309)
Q Consensus         5 ~g~~~p~~~~~i~~~~p~~~rg~~~g~~~~~~~~g~~lg~~l~~~l~~~-~gWr~~F~i~~~~~~v~~~~~~~~~~~~p~   83 (309)
                      .+...|+..+++.|++|+|||+++.++...+.++|.++++.+++++.+. +|||..|++.+++.++..+. ....+|+++
T Consensus       108 ~~~~~~~~~al~~~~~~~~~r~~~~~~~~~g~~~g~i~g~~l~~~l~~~~~gw~~~f~i~a~~~l~~~l~-~~~~~e~~~  186 (402)
T PRK11902        108 SASQDIVFDAYSTDVLHPEERGAGAAVKVLGYRLAMLVSGGLALWLADRVLGWGNTYLLMAGLMLAGALT-TLWAPEPEV  186 (402)
T ss_pred             HHHHHHHHHHHHHHhcChhhhhHHHHHHHHHHHHHHHHHhHHHHHHHhcccCHHHHHHHHHHHHHHHHHH-HHhcCCCcc
Confidence            4456678889999999999999999999999999999999999999886 59999999877766554332 223343222


Q ss_pred             CCCCCCHHHHHHHHhccCCCCCCCCCChhHhhcchHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhCCCccchhhHhhhh
Q 021674           84 EDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLP  163 (309)
Q Consensus        84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~wlp~~l~~~~g~s~~~~g~~~~~~  163 (309)
                      ++++ +++.++         +.  ..++++++|||.++......++.+........+.+.++.+++|+++.+.+++....
T Consensus       187 ~~~~-~~~~~~---------~~--~~~~~~l~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~l~~~~G~~~~~~g~~~~~~  254 (402)
T PRK11902        187 PARP-PRSLGE---------AV--VGPLRDFFSRRGAWALLLLIVLYKLGDAFAGSLSTTFLIRGAGFSAGEVGIVNKTL  254 (402)
T ss_pred             cccc-cchhHH---------HH--HHHHHHHHhCcCHHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCHHHHHHHHhHH
Confidence            1110 000000         00  12456789999988776666665555444456777788888999999999987655


Q ss_pred             H-HHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHhhHHHHHHHHHhhc-cCchHHHHHHHHH---HHhhhhhh-hcch
Q 021674          164 W-LTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSH-VDSPAMAVLCMAC---SQGTDAFS-QSGL  237 (309)
Q Consensus       164 ~-~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~---~~~~~~~~-~~~~  237 (309)
                      + ++..++.+++|++.||+++|+...      ..........+.+..... .++.+........   ..+..... ....
T Consensus       255 ~~~~~i~g~~~~g~l~~r~g~~~~l~------~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~  328 (402)
T PRK11902        255 GLAATIVGALAGGTLMVRLGLYRSLM------LFGVLQAVSNLGYWVLAVTPKHLWTMALAIGIENLCGGMGTAAFVALL  328 (402)
T ss_pred             HHHHHHHHHHHHHHHHHHHhHHHHHH------HHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            4 468899999999999998763110      011111111111111111 1232222222111   11111000 1111


Q ss_pred             hhhhhccCCCchHHHHHHHhHhHhhhhhHHHhHHHhhcccCCchHHHHHHHHHHHHHHHHH
Q 021674          238 YSNHQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSWDDVFKVSVGLYLVGTAVW  298 (309)
Q Consensus       238 ~~~~~~~~~~~~g~a~~~~~~~~~lgg~i~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~  298 (309)
                      ....++.   ..+...++.+....+++.+++.+.|.+.|+.||...|.+.+.+.+++.+..
T Consensus       329 ~~~~~~~---~~~~~~~~~~~~~~l~~~~~~~~~G~l~~~~G~~~~f~~~~~~~~~~~~~~  386 (402)
T PRK11902        329 MALCNRS---FSATQYALLSALASVGRVYVGPTSGYLVEAYGWPGFYLMTVVIALPGLALL  386 (402)
T ss_pred             HHhcCCC---CcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHH
Confidence            1111221   223334455555566776667789999999889998988887777665443

>TIGR00902 2A0127 phenyl proprionate permease family protein

Probab=99.88  E-value=1.3e-20  Score=172.61  Aligned_cols=267  Identities=10%  Similarity=0.019  Sum_probs=174.0

Q ss_pred             CcccccchhhHHHHHhccCCCcchhHHHHHHHhhhhhHHHHhhhhHHHHhhhcCCcchhHhhhhHHHHHHHHHHhhcccC
Q 021674            2 GIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVWLSKAHSS   81 (309)
Q Consensus         2 Gig~g~~~p~~~~~i~~~~p~~~rg~~~g~~~~~~~~g~~lg~~l~~~l~~~~gWr~~F~i~~~~~~v~~~~~~~~~~~~   81 (309)
                      |.+.+...|.+.++..++  +|||+++.|......++|.++++++++++.+++|||..|++...+..+.. ... ..+++
T Consensus       105 ~~~~~~~~p~~~al~~~~--~~~~~~~~g~~~~~~slG~~~g~~l~g~l~~~~g~~~~f~~~~~~~~~~~-~~~-~~~~~  180 (382)
T TIGR00902       105 ALFFSAGMPIGDALANTW--QKQFGLDYGKVRLIGSAAFIIGSALFGGLIGMFDEQNILAILTAGLAFML-IGF-LIKPT  180 (382)
T ss_pred             HHHHccchhHHHHHHHHH--HHHcCCCccHHHHHHHHHHHHHHHHHHHHHHHcChhHHHHHHHHHHHHHH-HHH-HcCCC
Confidence            455667788888887664  57899999999999999999999999999999999999988655432222 222 22222


Q ss_pred             CCCCCCCCHHHHHHHHhccCCCCCCCCCChhHhhcchHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhCCCccchhhHhh
Q 021674           82 PAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCV  161 (309)
Q Consensus        82 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~wlp~~l~~~~g~s~~~~g~~~~  161 (309)
                      ++++++ ++ ++        +++  +..++++++|||++|...+..++...+...+.+|.|.|+++ +|.|..+.|.+..
T Consensus       181 ~~~~~~-~~-~~--------~~~--~~~~~~~~l~~~~~~~~l~~~~l~~~~~~~~~~~~~~~l~~-~g~s~~~~g~l~~  247 (382)
T TIGR00902       181 IPPKDA-IP-ED--------ESQ--GDSAFIALLKNPMNLRFLAAVCLIQGAHAAYYGFSAIYWQA-AGISASATGLLWG  247 (382)
T ss_pred             CCCCcc-cc-cc--------ccc--cchhHHHHHcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-CCCCHhHHHHHHH
Confidence            111110 00 00        000  12245778999999988888888778888999999999976 8999999999888


Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHhhHHHHHHHHHhhccCchHHHHH-HHHHHHhhhhhhhcchhhh
Q 021674          162 LPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSPAMAVL-CMACSQGTDAFSQSGLYSN  240 (309)
Q Consensus       162 ~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~  240 (309)
                      ...++..++..+.+++.||++.|+        . ...+.....+........++++..+. ...-+...+.+ .......
T Consensus       248 ~~~~~~i~~~~~~~~l~~r~g~~~--------~-l~~~~~~~~~~~~~~~~~~~~~~~~~~q~l~g~~~~~~-~~~~~~~  317 (382)
T TIGR00902       248 IGVLAEIIIFAFSNKLFQNCSARD--------L-LLISAIACVGRWAIIGAIEAFPLIFLLQILHCGTFAVC-HLAAMRY  317 (382)
T ss_pred             HHHHHHHHHHHHhHHHHhhCCHHH--------H-HHHHHHHHHHHHHHHHhHhhHHHHHHHHHHHHHHHHHH-HHHHHHH
Confidence            777888888888888888887653        1 11222222211111222333332221 11112222211 1122222


Q ss_pred             hhccCCCchHHHHHHHhH-hHhhhhhHHHhHHHhhcccCCchHHHHHHHHHHHHHHH
Q 021674          241 HQDIAPRYSGVLLGLSNT-AGVLAGVFGTAATGYILQHGSWDDVFKVSVGLYLVGTA  296 (309)
Q Consensus       241 ~~~~~~~~~g~a~~~~~~-~~~lgg~i~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~  296 (309)
                      .++.+++.++.+.++.|. ...+|..++|.+.|++.|+.++ ..|...+.+.+++.+
T Consensus       318 i~~~~~~~~~~~q~~~~~~~~g~g~~~g~~~~G~l~~~~g~-~~~~~~~~~~~~~~~  373 (382)
T TIGR00902       318 IAAQPGSEIAKLQALYNALAMGGLIAIFTAFAGFIYPTLGA-GTFVFMAIIAAAAFF  373 (382)
T ss_pred             HHhCCHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccH-HHHHHHHHHHHHHHH
Confidence            234456678888888774 4568889999999999999765 567766666665543

This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.

>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator)

Probab=99.88  E-value=2.6e-21  Score=175.48  Aligned_cols=252  Identities=17%  Similarity=0.152  Sum_probs=154.4

Q ss_pred             CCcccccchhhHHHHHhccCCCcchhHHHHHHHhhhhhHHHHhhhhHHHHhh----------hcCCcchh-HhhhhHHHH
Q 021674            1 MGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIH----------RFGWPSVF-YSFGSLGTV   69 (309)
Q Consensus         1 ~Gig~g~~~p~~~~~i~~~~p~~~rg~~~g~~~~~~~~g~~lg~~l~~~l~~----------~~gWr~~F-~i~~~~~~v   69 (309)
                      +|++.+ .++....+++|++|+|||++++++.....++|..+++.+++.+.+          +.+||+.| +..+++..+
T Consensus       101 ~g~~~~-~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~  179 (366)
T TIGR00886       101 IGIAGG-SFASCMPWISFFFPKKIQGTALGLAAGWGNMGGGVAQFVMPPIIGSLIFGAGLPAHLAWGWAFVIVPAGILLL  179 (366)
T ss_pred             HHHhch-hhHhHHHHHHHhcCHhhhhHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhcccccccccccchhHHHHHHHHHH
Confidence            466654 456678999999999999999999998888888888877776665          34899999 444554444


Q ss_pred             HHHHHHhhcccCCCCCCCCCHHHHHHHHhccCCCCCCCCCChhHhhcchHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHh
Q 021674           70 WFTVWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVL  149 (309)
Q Consensus        70 ~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~wlp~~l~~~~  149 (309)
                      ...+.+...+|+|+++++.++.+.   .++....++....+.++.+|+|++|...+..++.....+.+.+|+|.|+++.+
T Consensus       180 ~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  256 (366)
T TIGR00886       180 PALLIFFVGADTPPGKPATGKLSF---KGARWSVGTGALGDQLKVFRDRHTWILALLYSVTFGSFLGVSSIFAMFFKDQF  256 (366)
T ss_pred             HHHHHHHhcccCCcccccchhccc---ccccccccchhHHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence            333333333444432211000000   00000000000113456788998888777777666667888999999999999


Q ss_pred             CCCccchhhHhhhhHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHhhHHHHHHHHHhhccC--chHHHHH-HHHHH
Q 021674          150 HFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVD--SPAMAVL-CMACS  226 (309)
Q Consensus       150 g~s~~~~g~~~~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~-~~~~~  226 (309)
                      |+++.+++.+..+..+...++.++.|+++||+++|+...       ..................+  +...... .....
T Consensus       257 g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  329 (366)
T TIGR00886       257 GLSKVTAGAYASLGGLLGSLARPLGGAISDRLGGARKLL-------MSFLGVAMGAFLVVLGLVSPLSLAVFIVLFVALF  329 (366)
T ss_pred             CCcHHHHHHHHHHHHHHHHHHhhccchHHHhhccchhHH-------HHHHHHHHHHHHHHhcCCCcchHHHHHHHHHHHH
Confidence            999999999888888999999999999999998764221       1111111111111111221  2222111 11111


Q ss_pred             HhhhhhhhcchhhhhhccCCCchHHHHHHHhHhHhhhh
Q 021674          227 QGTDAFSQSGLYSNHQDIAPRYSGVLLGLSNTAGVLAG  264 (309)
Q Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~g~a~~~~~~~~~lgg  264 (309)
                      ...+ ...+..++...+..|+++|.+.|+.+..+++|+
T Consensus       330 ~~~g-~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~  366 (366)
T TIGR00886       330 FFSG-AGNGSTFALVPHIFRRATGAVSGLVGAIGNLGG  366 (366)
T ss_pred             HHhc-cccchhhhcchhhchhhcccHHHHHHHhccCCC
Confidence            1111 122233444445667889999999999988764

>TIGR00895 2A0115 benzoate transport

Probab=99.88  E-value=1.3e-20  Score=172.25  Aligned_cols=264  Identities=23%  Similarity=0.333  Sum_probs=164.9

Q ss_pred             CCcccccchhhHHHHHhccCCCcchhHHHHHHHhhhhhHHHHhhhhHHHHhhhcCCcchhHhhhhHHHHHHHHHHhhccc
Q 021674            1 MGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVWLSKAHS   80 (309)
Q Consensus         1 ~Gig~g~~~p~~~~~i~~~~p~~~rg~~~g~~~~~~~~g~~lg~~l~~~l~~~~gWr~~F~i~~~~~~v~~~~~~~~~~~   80 (309)
                      +|++.+...|...+++.|++|+++|++++++...+..+|..+++.+++++.+.+|||+.|++.+++..+...+.....+|
T Consensus       115 ~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~  194 (398)
T TIGR00895       115 AGLGLGGLMPNLNALVSEYAPKRFRGTAVGLMFCGYPIGAAVGGFLAGWLIPVFGWRSLFYVGGIAPLLLLLLLMRFLPE  194 (398)
T ss_pred             HhcccccchhhHHHHHHHHcCHHhhchhHhhHhhHHHHHHHHHHHHHHHHhhcccceeehhhhhhHHHHHHHHHHHhCCC
Confidence            47889999999999999999999999999999999999999999999999999999999998766555443333334455


Q ss_pred             CCCCCCCCCHHHHHH----HHhc---c----CCCCCC----CCCChhHhhcch---HHHHHHHHHHHHHHHHHHHHHhHH
Q 021674           81 SPAEDPQLRPAEKKL----IVSS---C----ASKEPV----KTIPWGLILSKP---PVWALIVSHFCHNWGTFILLTWMP  142 (309)
Q Consensus        81 ~p~~~~~~~~~~~~~----~~~~---~----~~~~~~----~~~~~~~l~~~~---~~~~~~~~~~~~~~~~~~~~~wlp  142 (309)
                      +++...+.+++++..    ..++   +    .++++.    ++..++.+++++   +.+......++.....+...+|+|
T Consensus       195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  274 (398)
T TIGR00895       195 SIDFLVSKRPETVRRIVNAIAPQMQAEAQSALPEQKATQGTKRSVFKALFQGKTARITVLLWLLYFMLLVGVYFLTNWLP  274 (398)
T ss_pred             CChHHHhcCHHHHHHHHHHHHHhccccccccccccccccchhhHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            433111111111000    0000   0    000000    001122233332   233344445555667778889999


Q ss_pred             HHHHHHhCCCccchhhHhhhhHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHhhHHHHHHHHHhhccCchHHH-HH
Q 021674          143 TYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSPAMA-VL  221 (309)
Q Consensus       143 ~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~  221 (309)
                       ++.+++|++..+.+.......++..++.++.|+++||+++|. .       .. ................++.... ..
T Consensus       275 -~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~-------~~-~~~~~~~~~~~~~~~~~~~~~~~~~  344 (398)
T TIGR00895       275 -KLMVELGFSLSLAATGGALFNFGGVIGSIIFGWLADRLGPRV-T-------AL-LLLLGAVFAVLVGSTLFSPTLLLLL  344 (398)
T ss_pred             -HHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchHH-H-------HH-HHHHHHHHHHHHHHHhhCHHHHHHH
Confidence             666678999999999999999999999999999999998651 1       11 1111111111111111222222 22


Q ss_pred             HHHHHHhhhhhhhcchhhhhhc-cCCCchHHHHHHHhHhHhhhhhHHHhHHHhhc
Q 021674          222 CMACSQGTDAFSQSGLYSNHQD-IAPRYSGVLLGLSNTAGVLAGVFGTAATGYIL  275 (309)
Q Consensus       222 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~g~a~~~~~~~~~lgg~i~~~~~g~l~  275 (309)
                      ....+.+.+. ..+.......+ .+++.++.+.|+.+...++++.++|.+.|+++
T Consensus       345 ~~~~g~~~~~-~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~G~ll  398 (398)
T TIGR00895       345 GAIAGFFVNG-GQSGLYALMALFYPTAIRATGVGWAIGIGRLGAIIGPILAGYLL  398 (398)
T ss_pred             HHHHHHHHHH-HHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHhHHhcC
Confidence            2222222221 12222333333 35578999999999999999999999999763

>TIGR01272 gluP glucose/galactose transporter

Probab=99.87  E-value=2.3e-20  Score=166.01  Aligned_cols=266  Identities=12%  Similarity=0.071  Sum_probs=174.0

Q ss_pred             CcccccchhhHHHHHhccCCCcchhHHHHHHHhhhhhHHHHhhhhHHHHhh----------------hcCCcchhHhhhh
Q 021674            2 GIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIH----------------RFGWPSVFYSFGS   65 (309)
Q Consensus         2 Gig~g~~~p~~~~~i~~~~p~~~rg~~~g~~~~~~~~g~~lg~~l~~~l~~----------------~~gWr~~F~i~~~   65 (309)
                      |.|.+...+.+..++++..|+|++++.+++..+.+++|.+++|.+++.+..                ..+||++|++.+.
T Consensus        21 g~G~~~lq~~~n~~v~~~~~~~~~~~~l~~~~~~~~~G~~~gP~i~~~~i~~~~~~~~~~~~~~~~~~~~~~~~yl~ia~  100 (310)
T TIGR01272        21 ASGLTILQVAANPYVSILGPIETAASRLALTQAFNKLGTTVAPLFGGSLILSGAGDLSMQVATANAEAAKVHTPYLLLAG  100 (310)
T ss_pred             HhhHHHHHhhHHHHHHHHCCcchHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCCcchhhhhhhhhHHHHHHHHHHHHHHH
Confidence            678888999999999999999999999999999999999999999998873                2479999997766


Q ss_pred             HHHHHHHHHHh-hcccCCCCCCCCCHHHHHHHHhccCCCCCCCCCChhHhhcchHHHHHHHHHHHHHHHHHHHHHhHHHH
Q 021674           66 LGTVWFTVWLS-KAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTY  144 (309)
Q Consensus        66 ~~~v~~~~~~~-~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~wlp~~  144 (309)
                      +..+..+.+.+ ..||   .+++  ++++.      .+++   ..+.++++|+|..+...+..++..-.--+..+|+|.|
T Consensus       101 ~~~~~~i~~~~~~~p~---~~~~--~~~~~------~~~~---~~~~~~~~~~~~~~l~~~~~f~yvg~e~~~~~w~~~y  166 (310)
T TIGR01272       101 ALAVLAIIFAFLPLPE---LQEA--DVARV------SSGD---TTQKTSAFQFTHLVLGALGIFVYVGAEVSAGSFLVNF  166 (310)
T ss_pred             HHHHHHHHHHHccCCC---CCcc--ccccc------cccc---ccchhhHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            65444333322 2222   1111  00000      0000   0112346788888876666666554567889999999


Q ss_pred             HHHH--hCCCccchhhHhhhhHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHhhHHHHHHHHHhhccCchHHHHHH
Q 021674          145 YNQV--LHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSPAMAVLC  222 (309)
Q Consensus       145 l~~~--~g~s~~~~g~~~~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (309)
                      +.+.  +|+++.+.++..+....++.+|.+++++++||+++|+.        +. ......+.........+........
T Consensus       167 l~~~~~~g~s~~~a~~~~s~~~~~~~iGr~~~~~l~~r~g~~~~--------l~-~~~~l~~~~~~l~~~~~~~~~~~~~  237 (310)
T TIGR01272       167 LSDPHALGLPEDQAAHFTAYTWGGAMVGRFIGSAVMPMISQGRY--------LA-FNAFLAVLLSIGAALTHGYVAMWFV  237 (310)
T ss_pred             HHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHH--------HH-HHHHHHHHHHHHHHHcCCHHHHHHH
Confidence            9864  58999999999999999999999999999999987631        11 1111111111111111222111222


Q ss_pred             HHHHHhhhhhhhcchhhhhhccCCCchHHHHHHHhHhHhhhhhHHHhHHHhhcccCCchHHHHHHHHHHH
Q 021674          223 MACSQGTDAFSQSGLYSNHQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSWDDVFKVSVGLYL  292 (309)
Q Consensus       223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~a~~~~~~~~~lgg~i~~~~~g~l~~~~~~~~~~~~~~~~~~  292 (309)
                      ...+++.+ ...+..++...+..|+..+.++++. ..+.+|+++.|.+.|.+.|..+.+..|++...+++
T Consensus       238 ~l~g~~~s-~i~P~~~s~a~~~~~~~~~~asai~-~~~~~Gg~i~P~l~G~lad~~g~~~a~~v~~~~~~  305 (310)
T TIGR01272       238 LALGLFNS-IMFPTIFSLALNALGRHTSQGSGIL-CLAIVGGAIVPLLQGSLADCLGIQLAFALPVPCYL  305 (310)
T ss_pred             HHHHHHHH-HHHHHHHHHHHhhhhhhhhhhHHHH-HHHHhcchHHHHHHHHHHHhccchHHHHHHHHHHH
Confidence            22232222 1122233333333455566777775 56889999999999999998778888776555544

Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.

>PRK10473 multidrug efflux system protein MdtL; Provisional

Probab=99.87  E-value=4.3e-20  Score=169.53  Aligned_cols=170  Identities=15%  Similarity=0.153  Sum_probs=129.7

Q ss_pred             CCcccccchhhHHHHHhccCCCcchhHHHHHHHhhhhhHHHHhhhhHHHHhhhcCCcchhHhhhhHHHHHHHHHHhhccc
Q 021674            1 MGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVWLSKAHS   80 (309)
Q Consensus         1 ~Gig~g~~~p~~~~~i~~~~p~~~rg~~~g~~~~~~~~g~~lg~~l~~~l~~~~gWr~~F~i~~~~~~v~~~~~~~~~~~   80 (309)
                      +|++.+...+....++.|++|+|||+++.++.+...++|..+++.+++.+.+..|||+.|++.+.+.++...+.+...+|
T Consensus       101 ~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~i~~~~~~~i~~~l~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~  180 (392)
T PRK10473        101 QGIGAGCCYVVAFAILRDTLDDRRRAKVLSLLNGITCIIPVLAPVLGHLIMLKFPWQSLFYTMAAMGILVLLLSLFILKE  180 (392)
T ss_pred             HHhhhhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcChHHHHHHHHHHHHHHHHHHHHHcCC
Confidence            47788888899999999999999999999999999999999999999998889999999999887766554443334444


Q ss_pred             CCCCCCCCCHHHHHHHHhccCCCCCCCCCChhHhhcchHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhCCCccchhhHh
Q 021674           81 SPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFC  160 (309)
Q Consensus        81 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~wlp~~l~~~~g~s~~~~g~~~  160 (309)
                      +++++++   +++          +  ...+.++.+|||+.+.......+.....+.+..+.|.++++++|+++.+.+.+.
T Consensus       181 ~~~~~~~---~~~----------~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~  245 (392)
T PRK10473        181 TRPARAP---AAS----------S--KPRENSESLLNRFFLSRLVITTLSVTVILTFVNTSPVLLMEQMGFSRGEYAIIM  245 (392)
T ss_pred             CCCcccC---Ccc----------c--hHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHcCCCHHHHHHHH
Confidence            3221100   000          0  011234567888877655544444444556778889999999999999999988


Q ss_pred             hhhHHHHHHHHHHHHHHHHHHHHcC
Q 021674          161 VLPWLTMAFSANLGGWIADTLVSKG  185 (309)
Q Consensus       161 ~~~~~~~~ig~~~~G~l~dr~~~r~  185 (309)
                      ....++..++.++.+++.||+++|+
T Consensus       246 ~~~~~~~i~~~~~~~~l~~r~g~~~  270 (392)
T PRK10473        246 ALTAGVSMTVSFSTPFALGIFKPRT  270 (392)
T ss_pred             HHHHHHHHHHHHHHHHHHHhcCHHH
Confidence            8889999999999999999998763

>TIGR00896 CynX cyanate transporter

Probab=99.87  E-value=9.3e-21  Score=171.61  Aligned_cols=252  Identities=13%  Similarity=0.126  Sum_probs=163.5

Q ss_pred             CCcccccchhhHHHHHhccCCCcchhHHHHHHHhhhhhHHHHhhhhHHHHhhhc--CCcchhHhhhhHHHHHHHHHHhhc
Q 021674            1 MGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRF--GWPSVFYSFGSLGTVWFTVWLSKA   78 (309)
Q Consensus         1 ~Gig~g~~~p~~~~~i~~~~p~~~rg~~~g~~~~~~~~g~~lg~~l~~~l~~~~--gWr~~F~i~~~~~~v~~~~~~~~~   78 (309)
                      +|+|.+...+....++.|++| +||++++++.+.+.++|..+++.+++.+.++.  +||+.|.+.+.+.++....+.   
T Consensus        97 ~g~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~i~~~~~~~l~~~~~~~w~~~f~~~~~~~~~~~~~~~---  172 (355)
T TIGR00896        97 IGVGIAIINVLLPSLIKRDFP-QRVGLMTGLYSMALMGGAALAAAATVPLAQHSGGHWQQALAWWALPALLALLAWI---  172 (355)
T ss_pred             HHHHHHHHhccchHHHHHhCc-chhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHh---
Confidence            367777777788888999997 68999999999999999999999999988875  399999876655443322222   


Q ss_pred             ccCCCCCCCCCHHHHHHHHhccCCCCCCCCCChhHhhcchHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhCCCccchhh
Q 021674           79 HSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGL  158 (309)
Q Consensus        79 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~wlp~~l~~~~g~s~~~~g~  158 (309)
                      ++.++++++    +          + +.+..+.++++|||..|......++....++...+|+|.|+++ +|++..+.+.
T Consensus       173 ~~~~~~~~~----~----------~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~-~g~~~~~~g~  236 (355)
T TIGR00896       173 PQVRRRVAA----N----------Q-TTTRLTPVRIWRSPLAWQVTVFFGLQSGLYYSLIGWLPAILIS-HGASAATAGS  236 (355)
T ss_pred             hhhccccCC----C----------C-CCCCCCCchhhcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCCHHHHHH
Confidence            221111100    0          0 0001234567899998877766666667788899999999986 7999999999


Q ss_pred             HhhhhHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHhhHHHHHHHHHhhccCchHHHHHHHHHHHhhhhhhhcchh
Q 021674          159 FCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSPAMAVLCMACSQGTDAFSQSGLY  238 (309)
Q Consensus       159 ~~~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (309)
                      +.+...++..++.++.|+++||+++|+..      .................... +... ......+.+.+.. .+...
T Consensus       237 ~~~~~~~~~i~~~~~~g~l~dr~~~~~~~------~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~l~g~~~g~~-~~~~~  307 (355)
T TIGR00896       237 LLALMQLAQAASALLIPALARRVKDQRGI------VAVLAVLQLVGLCGLLFAPM-HGLW-AWALVLGLGQGGA-FPLAL  307 (355)
T ss_pred             HHHHHHHHHHHHHHhHHHHHhhhccchHH------HHHHHHHHHHHHHHHHHhhh-hHHH-HHHHHHHHhhhhH-hHHHH
Confidence            99999999999999999999999654311      11111111111111111111 1111 1122222222211 11111


Q ss_pred             hh-hhcc-CCCchHHHHHHHhHhHhhhhhHHHhHHHhhccc-CCch
Q 021674          239 SN-HQDI-APRYSGVLLGLSNTAGVLAGVFGTAATGYILQH-GSWD  281 (309)
Q Consensus       239 ~~-~~~~-~~~~~g~a~~~~~~~~~lgg~i~~~~~g~l~~~-~~~~  281 (309)
                      +. ..+. ++++++...++.+..+++++.++|.+.|++.|+ ++|.
T Consensus       308 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~gp~~~G~l~~~~g~~~  353 (355)
T TIGR00896       308 TLIGLRSRQAAQAAALSAMAQSIGYLLAALGPLFVGVLHDISGNWL  353 (355)
T ss_pred             HHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccC
Confidence            11 1222 345678889999999999999999999999997 4453

This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.

>PRK11652 emrD multidrug resistance protein D; Provisional

Probab=99.87  E-value=1.1e-19  Score=167.00  Aligned_cols=257  Identities=13%  Similarity=0.105  Sum_probs=169.4

Q ss_pred             CCcccccchhhHHHHHhccCCCcchhHHHHHHHhhhhhHHHHhhhhHHHHhhhcCCcchhHhhhhHHHHHHHHHHhhccc
Q 021674            1 MGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVWLSKAHS   80 (309)
Q Consensus         1 ~Gig~g~~~p~~~~~i~~~~p~~~rg~~~g~~~~~~~~g~~lg~~l~~~l~~~~gWr~~F~i~~~~~~v~~~~~~~~~~~   80 (309)
                      +|++.+...+....+..|++|++||+++.++.+.+..++..+++++++++.++.|||+.|++.+++.++.........+|
T Consensus       106 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~  185 (394)
T PRK11652        106 QGLGTGVGGVMARTLPRDLYEGTQLRHANSLLNMGILVSPLLAPLIGGLLTTLFGWRACYLFLLLLGAGVTFSMARWMPE  185 (394)
T ss_pred             HHhhhhHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccChHHHHHHHHHHHHHHHHHHHHhCCc
Confidence            36677777888888999999999999999999999999999999999999999999999998777665543333334454


Q ss_pred             CCCCCCCCCHHHHHHHHhccCCCCCCCCCChhHhhcchHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhCCCccchhhHh
Q 021674           81 SPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFC  160 (309)
Q Consensus        81 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~wlp~~l~~~~g~s~~~~g~~~  160 (309)
                      +++++++  +++              ...++++++|||+.|......+....+...+.++.|.++++.+|+|+.+.++..
T Consensus       186 ~~~~~~~--~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~  249 (394)
T PRK11652        186 TRPADAR--RTR--------------VLASYRTLLSNRRFNCYLLMLIGTLAGIAVFEACSGVLMGAVLGLSSMTVSILF  249 (394)
T ss_pred             cCccccc--hhH--------------HHHHHHHHHcChHHHHHHHHHHHHHHHHHHHHHhChHHHHHHcCCCHHHHHHHH
Confidence            3322111  000              012356678898887655555555555556667889999998999999999988


Q ss_pred             hhhHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHhhHHHHHHHH--HhhccCchHHHHH-HHHHHHhhhhhhhcch
Q 021674          161 VLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLT--QLSHVDSPAMAVL-CMACSQGTDAFSQSGL  237 (309)
Q Consensus       161 ~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~  237 (309)
                      ....++..+++.+.+++.||.+++.        ...............  ......+.+.... ....+.+.+ ...+..
T Consensus       250 ~~~~~~~~~g~~~~~~l~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~-~~~~~~  320 (394)
T PRK11652        250 ILPIPAAFFGAWFAGRPNKRFSTLM--------WQSVICCLLAGLLMWIPGWFGVMNVWTLLVPAALFFFGAG-MLFPLA  320 (394)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHH--------HHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHH-HHHHHH
Confidence            8777888888888888888886321        111111111111111  1111112222221 111222222 112223


Q ss_pred             hhhhhccCCCchHHHHHHHhHhHhhhhhHHHhHHHhhcccCCchH
Q 021674          238 YSNHQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSWDD  282 (309)
Q Consensus       238 ~~~~~~~~~~~~g~a~~~~~~~~~lgg~i~~~~~g~l~~~~~~~~  282 (309)
                      .+...+..|+++|.+.++.+...++|+.+++.+.+.+.+...+..
T Consensus       321 ~~~~~~~~~~~~g~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~  365 (394)
T PRK11652        321 TSGAMEPFPYLAGTAGALLGGLQNIGSGLAALLSAMLPQTGQFSL  365 (394)
T ss_pred             HHHHHhhccccchHHHHHHHHHHHHHHHHHHHHHHHccCCchHHH
Confidence            333345556788999999999999999999999999876654443

>PRK11128 putative 3-phenylpropionic acid transporter; Provisional

Probab=99.87  E-value=2.1e-20  Score=171.17  Aligned_cols=267  Identities=11%  Similarity=0.086  Sum_probs=170.4

Q ss_pred             CcccccchhhHHHHHhccCCCcchhHHHHHHHhhhhhHHHHhhhhHHHHhhhcCCcchhHhhhhHHHHHHHHHHhhcccC
Q 021674            2 GIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVWLSKAHSS   81 (309)
Q Consensus         2 Gig~g~~~p~~~~~i~~~~p~~~rg~~~g~~~~~~~~g~~lg~~l~~~l~~~~gWr~~F~i~~~~~~v~~~~~~~~~~~~   81 (309)
                      |++.+...|.+.++..+|  ++||+++.+......++|.++|+++++++.+++|||..|++.+...++.. +.....+|+
T Consensus       105 g~~~~~~~~~~~a~~~~~--~~~~~~a~~~~~~~~~lg~~igp~lgg~l~~~~g~~~~f~~~~~~~~~~~-~~~~~~~~~  181 (382)
T PRK11128        105 NLFFSPLVPLTDALANTW--QKQIGLDYGKVRLWGSIAFVIGSALTGKLVSWFGEQAILWILTAGVASML-LGQLLRPTI  181 (382)
T ss_pred             HHHHcccccHHHHHHHHH--HhhccCCcchHHHHHHHHHHHHHHHHHHHHHHcChhHHHHHHHHHHHHHH-HHHHccCCC
Confidence            556778888888887777  46788889999999999999999999999999999999997665443332 222222321


Q ss_pred             CCCCCCCCHHHHHHHHhccCCCCCCCCCChhHhhcchHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhCCCccchhhHhh
Q 021674           82 PAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCV  161 (309)
Q Consensus        82 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~wlp~~l~~~~g~s~~~~g~~~~  161 (309)
                      +   |+. ++++       ..+++  ..++++++|||++|......++.........+++|.|+++ .|++..+.|.+..
T Consensus       182 ~---~~~-~~~~-------~~~~~--~~~~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~-~g~s~~~~g~~~~  247 (382)
T PRK11128        182 M---PQG-ESRQ-------QESAG--WPAWKALLKEPTVWRFLLCVSLLQGSHAAYYGFSAIYWQA-AGYSASTIGYLWS  247 (382)
T ss_pred             C---Ccc-cccc-------ccccc--cchHHHHHcChhHHHHHHHHHHHHHHhHhHHHHHHHHHHH-CCCCHhHHHHHHH
Confidence            1   110 0000       00011  2357889999999988777777766777788899999965 7999999999988


Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHhhHHHHHHHHHhhccCchHHHHH-HHHHHHhhhhhhhcchhhh
Q 021674          162 LPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSPAMAVL-CMACSQGTDAFSQSGLYSN  240 (309)
Q Consensus       162 ~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~  240 (309)
                      ...++..+...+.|++.||+++|+.        + ..+.....+........++++..+. ....+.+.+.. .+.....
T Consensus       248 ~~~~~~~~~~~~~g~l~~r~~~~~~--------l-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~-~~~~~~~  317 (382)
T PRK11128        248 LGVVAEVLIFAFSNRLFRRWSARDL--------L-LLSAICGVVRWGLMGSTTALPWLIVIQILHCGTFTVC-HLAAMRY  317 (382)
T ss_pred             HHHHHHHHHHHHHHHHHHHCCHHHH--------H-HHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHH-HHHHHHH
Confidence            8888888888999999999886531        1 1122222222111223334443322 22222222211 1222222


Q ss_pred             hhccCCCchHHHHHHHhHhH-hhhhhHHHhHHHhhcccCCchHHHHHHHHHHHHHHH
Q 021674          241 HQDIAPRYSGVLLGLSNTAG-VLAGVFGTAATGYILQHGSWDDVFKVSVGLYLVGTA  296 (309)
Q Consensus       241 ~~~~~~~~~g~a~~~~~~~~-~lgg~i~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~  296 (309)
                      ..+.++++.+...+..+... .+|..++|.+.|.+.|+.++ ..+...+++.+++.+
T Consensus       318 ~~~~~~~~~~~~~~~~~~~~~~~g~~ig~~i~G~l~~~~g~-~~~~~~~~~~~~~~~  373 (382)
T PRK11128        318 IAARPGSEVIRLQALYSALAMGGSIAIMTVLSGFLYQHLGA-GVFWVMALVALPALF  373 (382)
T ss_pred             HHHCCHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccH-HHHHHHHHHHHHHHH
Confidence            23345555677788776443 45668999999999998665 355555555554443

>PRK11646 multidrug resistance protein MdtH; Provisional

Probab=99.87  E-value=2.7e-20  Score=171.55  Aligned_cols=270  Identities=11%  Similarity=0.058  Sum_probs=164.0

Q ss_pred             CCcccccchhhHHHHHhccCCCcchhHHHHHHHhhhhhHHHHhhhhHHHHhhhcCCcchhHhhhhHHHHHHHHHHhhccc
Q 021674            1 MGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVWLSKAHS   80 (309)
Q Consensus         1 ~Gig~g~~~p~~~~~i~~~~p~~~rg~~~g~~~~~~~~g~~lg~~l~~~l~~~~gWr~~F~i~~~~~~v~~~~~~~~~~~   80 (309)
                      +|++++...|+..+++.|++|+|||++++|+.....++|..+|+++++++. ++|||+.|++.+.+.++..++.....+|
T Consensus       109 ~g~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~g~l~-~~g~~~~f~~~~~~~~~~~i~~~~~~~~  187 (400)
T PRK11646        109 SGLGGTLFDPPRTALVIKLIRPHQRGRFFSLLMMQDSAGAVIGALLGSWLL-QYDFRLVCATGAVLFVLAAAFNAWLLPA  187 (400)
T ss_pred             HHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhhHHHHHHHHHHHHHHHHHHHHHhCCc
Confidence            467777888999999999999999999999999999999999999999998 7899999998776655443332333332


Q ss_pred             CCCCCCCCCHHHHHHHHhccCCCCCCCCCChhHhhcchHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhCCCccchhhHh
Q 021674           81 SPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFC  160 (309)
Q Consensus        81 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~wlp~~l~~~~g~s~~~~g~~~  160 (309)
                      . ++++.  ++            +.  ..++++++|||+++......+...........++|.|+++..+ ++.+.+.+.
T Consensus       188 ~-~~~~~--~~------------~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~-~~~~~g~l~  249 (400)
T PRK11646        188 Y-KLSTV--RT------------PV--REGMTRVLRDKRFVTYVLTLTGYYMLAVQVMLMLPIMVNDIAG-SPSAVKWMY  249 (400)
T ss_pred             c-ccccc--ch------------hh--HHHHHHHHcCchHHHHHHHHHHHHHHHHHHHHhhhhhHHhhcC-CchHHHHHH
Confidence            1 11100  00            00  1135677889888765554444333344456789999987644 778888887


Q ss_pred             hhhHHHHHHHHHHHHHHHHHH-HHcCCChhhHHHHHHHHhhHHHHHHHHHhhccCchHHHHHH-HHHHHhhhhhhhcchh
Q 021674          161 VLPWLTMAFSANLGGWIADTL-VSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSPAMAVLC-MACSQGTDAFSQSGLY  238 (309)
Q Consensus       161 ~~~~~~~~ig~~~~G~l~dr~-~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~  238 (309)
                      ....+....+....+++.||. +.++        .+. .++.............++....... ...+.+.. ...+...
T Consensus       250 ~~~~~~~~~~~~~~~~~~~~r~~~~~--------~~~-~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~g~~-~~~p~~~  319 (400)
T PRK11646        250 AIEACLSLTLLYPIARWSEKRFRLEH--------RLM-AGLLIMSLSMFPIGMVSNLQQLFTLICLFYIGSI-IAEPARE  319 (400)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhcchhH--------HHH-HHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHH-HHHccHH
Confidence            776666555554555666553 2221        111 1111111111111122223222211 11122211 1112222


Q ss_pred             hhhh-ccCCCchHHHHHHHhHhHhhhhhHHHhHHHhhcccC---C-chHHHHHHHHHHHHHHHHHH
Q 021674          239 SNHQ-DIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQHG---S-WDDVFKVSVGLYLVGTAVWN  299 (309)
Q Consensus       239 ~~~~-~~~~~~~g~a~~~~~~~~~lgg~i~~~~~g~l~~~~---~-~~~~~~~~~~~~~~~~~~~~  299 (309)
                      .... ..+++++|.+.++.|...++|+.++|.+.|.+.|+.   + ....+.....+.+++.+...
T Consensus       320 ~~~~~~~p~~~~g~~~g~~~~~~~~g~~ig~~l~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  385 (400)
T PRK11646        320 TLSASLADARARGSYMGFSRLGLALGGAIGYIGGGWLFDLGKALNQPELPWMMLGIIGLITLLALY  385 (400)
T ss_pred             HHHHhcCCcccchhhhhHHHHHHHHHHHhcccchHHHHHHHhhcCCcchHHHHHHHHHHHHHHHHH
Confidence            2222 345678999999999999999999999999999873   2 23455554555554544433

>PRK03893 putative sialic acid transporter; Provisional

Probab=99.87  E-value=6.2e-21  Score=180.31  Aligned_cols=283  Identities=12%  Similarity=0.138  Sum_probs=161.8

Q ss_pred             CCcccccchhhHHHHHhccCCCcchhHHHHHHHhhhhhHHHHhhhhHHHHhhhcCCcchhHhhhhHHHHHHHHHHhhccc
Q 021674            1 MGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVWLSKAHS   80 (309)
Q Consensus         1 ~Gig~g~~~p~~~~~i~~~~p~~~rg~~~g~~~~~~~~g~~lg~~l~~~l~~~~gWr~~F~i~~~~~~v~~~~~~~~~~~   80 (309)
                      +|++.++..+....++.|++|+|+|++++++...+.++|..+++.+.+.+.+++|||+.|++. .+..+.........||
T Consensus       118 ~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~w~~~f~~~-~~~~~~~~~~~~~~p~  196 (496)
T PRK03893        118 IGMGMAGEYGSSATYVIESWPKHLRNKASGFLISGFSIGAVVAAQVYSLVVPVWGWRALFFIG-ILPIIFALWLRKNLPE  196 (496)
T ss_pred             HHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCHHHHHHHH-HHHHHHHHHHHHhCCC
Confidence            367788889999999999999999999999999999999999999999999999999999873 3333322222223333


Q ss_pred             CCCCCCCCCHH-H-HHHHHhccCCCCCCCCCC--------hhHhh-------------------------------cchH
Q 021674           81 SPAEDPQLRPA-E-KKLIVSSCASKEPVKTIP--------WGLIL-------------------------------SKPP  119 (309)
Q Consensus        81 ~p~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~--------~~~l~-------------------------------~~~~  119 (309)
                      +++.+++.+++ + ++........++......        ....+                               +.+.
T Consensus       197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  276 (496)
T PRK03893        197 AEDWKEKHAGKAPVRTMVDILYRGEHRIINILLTLAAAAALWFCFAGNLQNAAIVAVLGLLCAAIFISFMVQSSGKRWPT  276 (496)
T ss_pred             chhhhhhccccccchhHHHHHhcchhHHHHHHHHHHHHHHHHHHHHhhhcchhHHHHHHHHHHHHHHHHHHHhcccchhH
Confidence            22111000000 0 000000000000000000        00000                               0000


Q ss_pred             HHHHHHHHHHHHHHHHHHHHhHHHHHHHHhCCCccchhhHhhhhHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHh
Q 021674          120 VWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIG  199 (309)
Q Consensus       120 ~~~~~~~~~~~~~~~~~~~~wlp~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~~~  199 (309)
                      ........++.....+....|+|.|+++++|++..+.+.+.+...++..++.++.|+++||+++|+.        +....
T Consensus       277 ~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~dr~g~~~~--------~~~~~  348 (496)
T PRK03893        277 GVMLMVVVLFAFLYSWPIQALLPTYLKTDLGYDPHTVANVLFFSGFGAAVGCCVGGFLGDWLGTRKA--------YVCSL  348 (496)
T ss_pred             HHHHHHHHHHHHhccchHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHH--------HHHHH
Confidence            0000001111111112456899999998899999999999999999999999999999999987632        11111


Q ss_pred             hHHHHHHHHHhhccCchHHHH-HHHHHHHhhhhhhhcchhhhhhc-cCCCchHHHHHHHhHhHhhhhhHHHhHHHhhccc
Q 021674          200 FLGPAFFLTQLSHVDSPAMAV-LCMACSQGTDAFSQSGLYSNHQD-IAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQH  277 (309)
Q Consensus       200 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~g~a~~~~~~~~~lgg~i~~~~~g~l~~~  277 (309)
                      .+............+...+.. .........+............+ .+++.++.+.++.+...++|+.++|.+.|.+.|+
T Consensus       349 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~lgp~l~g~l~~~  428 (496)
T PRK03893        349 LISQLLIIPVFAIGGANVWVLGLLLFFQQMLGQGISGLLPKLIGGYFDTEQRAAGLGFTYNVGALGGALAPILGALIAQR  428 (496)
T ss_pred             HHHHHHHHHHhhccccHHHHHHHHHHHHHHHhcccchhhHHHHHhhCCHHHhhcccchhhhhhhHHHHHHHHHHHHHhcc
Confidence            111111111111111221111 11111101110111111122233 3456899999999999999999999999999999


Q ss_pred             CCchHHHHHHHHHHH
Q 021674          278 GSWDDVFKVSVGLYL  292 (309)
Q Consensus       278 ~~~~~~~~~~~~~~~  292 (309)
                      .++...+.....+..
T Consensus       429 ~g~~~~~~~~~~~~~  443 (496)
T PRK03893        429 LDLGTALASLSFSLT  443 (496)
T ss_pred             CChHHHHHHHHHHHH
Confidence            778777655444433

>PRK10133 L-fucose transporter; Provisional

Probab=99.87  E-value=2.6e-20  Score=173.53  Aligned_cols=281  Identities=10%  Similarity=0.115  Sum_probs=176.9

Q ss_pred             CCcccccchhhHHHHHhccCCCcchhHHHHHHHhhhhhHHHHhhhhHHHHhh------------------h--------c
Q 021674            1 MGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIH------------------R--------F   54 (309)
Q Consensus         1 ~Gig~g~~~p~~~~~i~~~~p~~~rg~~~g~~~~~~~~g~~lg~~l~~~l~~------------------~--------~   54 (309)
                      ||+|.|...+....++.++.|++||.+.+++.+...++|..+|+.+++.+..                  .        .
T Consensus       127 ~G~g~g~~~~~~~~~v~~~~~~~~~~~~~s~~~~~~~~G~~~g~~~g~~l~~~~~~~~~~~~~~~l~~~~~~~w~~~~~~  206 (438)
T PRK10133        127 IAAGLGCLETAANPFVTVLGPESSGHFRLNLAQTFNSFGAIIAVVFGQSLILSNVPHQSQDVLDKMTPEQLSAYKHSLVL  206 (438)
T ss_pred             HHHHHHHHHhhHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchhhhhccChhhHHHHHHHHHH
Confidence            5889999999999999998888888888999999999999999988876541                  0        3


Q ss_pred             CCcchhHhhhhH-HHHHHHHHHhhcccCCCCCCCCCHHHHHHHHhccCCCCCCCCCChhHhhcchHHHHHHHHHHHHHHH
Q 021674           55 GWPSVFYSFGSL-GTVWFTVWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWG  133 (309)
Q Consensus        55 gWr~~F~i~~~~-~~v~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~  133 (309)
                      +||++|+....+ .++..++..+..||.+++++    +++        ++.+ ...++++++|+|.++...+..++....
T Consensus       207 ~w~~~f~~~~~v~~~~~~~~~~~~~p~~~~~~~----~~~--------~~~~-~~~~~~~ll~~~~~~~~~l~~~~~~~~  273 (438)
T PRK10133        207 SVQTPYMIIVAIVLLVALLIMLTKFPALQSDNH----SDA--------KQGS-FSASLSRLARIRHWRWAVLAQFCYVGA  273 (438)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccc----ccc--------cccc-hhhhHHHHHhCchHHHHHHHHHHHHHH
Confidence            577777643332 22222222222232111100    000        0000 012346788999988776666777777


Q ss_pred             HHHHHHhHHHHH-HHHhCCCccchhhHhhhhHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHhhHHHHHHHHHhhc
Q 021674          134 TFILLTWMPTYY-NQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSH  212 (309)
Q Consensus       134 ~~~~~~wlp~~l-~~~~g~s~~~~g~~~~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~  212 (309)
                      .++..+|+|+|+ ++.+|+|+.+++....+..+++.++++++|++.||+++|+..        .....+....++... .
T Consensus       274 ~~~~~~~~~~~l~~~~~g~s~~~ag~~~~~~~~~~~vG~~~~g~l~~r~g~~~~l--------~~~~~~~~~~~~~~~-~  344 (438)
T PRK10133        274 QTACWSYLIRYAVEEIPGMTAGFAANYLTGTMVCFFIGRFTGTWLISRFAPHKVL--------AAYALIAMALCLISA-F  344 (438)
T ss_pred             HHHHHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHH--------HHHHHHHHHHHHHHH-H
Confidence            788889999996 667899999999999999999999999999999999876321        111111111111111 1


Q ss_pred             cCchHHHHHHHHHHHhhhhhhhcchhhhhhccCCCchHHHHHHHhHhHhhhhhHHHhHHHhhcccCC-chHHHHHHHHHH
Q 021674          213 VDSPAMAVLCMACSQGTDAFSQSGLYSNHQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGS-WDDVFKVSVGLY  291 (309)
Q Consensus       213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~a~~~~~~~~~lgg~i~~~~~g~l~~~~~-~~~~~~~~~~~~  291 (309)
                      .+.......+..++++.+ ...+..++...+..+++.+.+.++.++ ..+++.++|++.|.+.|..+ .+..|++.+.++
T Consensus       345 ~~~~~~~~~~~l~glg~~-~i~P~~~s~a~~~~~~~~~~as~l~~~-~~~g~~~~~~i~G~l~~~~g~~~~~~~v~~~~~  422 (438)
T PRK10133        345 AGGHVGLIALTLCSAFMS-IQYPTIFSLGIKNLGQDTKYGSSFIVM-TIIGGGIVTPVMGFVSDAAGNIPTAELIPALCF  422 (438)
T ss_pred             cCChHHHHHHHHHHHHHH-HHHHHHHHHHHcccchhhccchhHHhH-HhccchHHHHHHHHHHHhccchHHHHHHHHHHH
Confidence            112221122222333322 122334444444456667788887764 55788999999999999865 677787666555


Q ss_pred             HHHHHHHHhhcCCcc
Q 021674          292 LVGTAVWNLFSTGEK  306 (309)
Q Consensus       292 ~~~~~~~~~~~~~~~  306 (309)
                      +... .+.....|++
T Consensus       423 ~~~~-~~~~~~~~~~  436 (438)
T PRK10133        423 AVIF-IFARFRSQTA  436 (438)
T ss_pred             HHHH-HHHHHhhccc
Confidence            4433 4455555543

>PRK03633 putative MFS family transporter protein; Provisional

Probab=99.86  E-value=6.6e-20  Score=167.77  Aligned_cols=270  Identities=13%  Similarity=0.043  Sum_probs=168.0

Q ss_pred             CCcccccchhhHHHHHhccCCCcchhHHHHHHHhhhhhHHHHhhhhHHHHhhhcCCcchhHhhhhHHHHHHHHHHhhccc
Q 021674            1 MGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVWLSKAHS   80 (309)
Q Consensus         1 ~Gig~g~~~p~~~~~i~~~~p~~~rg~~~g~~~~~~~~g~~lg~~l~~~l~~~~gWr~~F~i~~~~~~v~~~~~~~~~~~   80 (309)
                      +|++.+...|...+.+.++.|++||++++++++.+.++|..+|+.+++.+.+...|+..+. .+.+..........  +.
T Consensus       104 ~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~--~~  180 (381)
T PRK03633        104 AGIGCAMIWVVVESALMCSGTSRNRGRLLAAYMMVYYLGTVLGQLLVSKVSTELMSVLPWV-TGLVLAAILPLLFT--RI  180 (381)
T ss_pred             HHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccchHHHH-HHHHHHHHHHHHHh--cc
Confidence            4788888889888888899999999999999999999999999999999887654443333 23222111111111  11


Q ss_pred             CCCCCCCCCHHHHHHHHhccCCCCCCCCCChhHhhcchHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhCCCccchhhHh
Q 021674           81 SPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFC  160 (309)
Q Consensus        81 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~wlp~~l~~~~g~s~~~~g~~~  160 (309)
                      +|++++                +++  ..+.++.+|+|..+......+..........+|+|.|+++ .|.++.+.+.+.
T Consensus       181 ~~~~~~----------------~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~-~g~s~~~~g~~~  241 (381)
T PRK03633        181 LNQQAE----------------NHD--STSIWPMLKLRQARLGVNGCIISGIVLGSLYGLMPLYLNH-QGMSDASIGFWM  241 (381)
T ss_pred             cCCCCC----------------CCC--CCCHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCCHHHHHHHH
Confidence            111100                000  1234567888887755444444444455677899999976 699999999988


Q ss_pred             hhhHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHhhHHHHHHHHHhhccCchHHHHHHHHHHHhhhhhhhcchhhh
Q 021674          161 VLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSPAMAVLCMACSQGTDAFSQSGLYSN  240 (309)
Q Consensus       161 ~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (309)
                      ....++..++.+..|+++||+++|+.        +. .+.............  ...........+.+... ..+.....
T Consensus       242 ~~~~~~~~~~~~~~g~l~dr~~~~~~--------l~-~~~~~~~~~~~~~~~--~~~~~~~~~l~g~~~~~-~~p~~~~~  309 (381)
T PRK03633        242 ALLVSAGILGQWPIGRLADRFGRLLV--------LR-VQVFVVILGSIAMLS--QAAMAPALFILGAAGFT-LYPVAMAW  309 (381)
T ss_pred             HHHHHHHHHHHhhhHHHHHHcCcHHH--------HH-HHHHHHHHHHHHHhh--hHHHHHHHHHHHHHHHh-HHHHHHHH
Confidence            88889999999999999999986631        11 111111111110111  11111111111211111 11222222


Q ss_pred             h-hccCCCchHHHHHHHhHhHhhhhhHHHhHHHhhcccCCchHHHHHHHHHHHHHHHHHHhhcCCc
Q 021674          241 H-QDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSWDDVFKVSVGLYLVGTAVWNLFSTGE  305 (309)
Q Consensus       241 ~-~~~~~~~~g~a~~~~~~~~~lgg~i~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  305 (309)
                      . +..++++++.+.+..+...++|+.++|.+.|++.|+.++...|.+.+.+.+++. +...+.+||
T Consensus       310 ~~~~~~~~~~~~~~~~~~~~~~lG~~igp~~~G~l~~~~g~~~~f~~~~~~~l~~~-~~~~~~~~~  374 (381)
T PRK03633        310 ACEKVEHHELVAMNQALLLSYTVGSLLGPSFTAMLMQNYSDNLLFIMIASVSFIYL-LMLLRKAGH  374 (381)
T ss_pred             HHccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCccHHHHHHHHHHHHHH-HHHHhccCC
Confidence            2 233445667777778888899999999999999999889888888777776554 333333343

>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional

Probab=99.86  E-value=1.1e-20  Score=195.38  Aligned_cols=275  Identities=12%  Similarity=0.072  Sum_probs=181.3

Q ss_pred             CCcccccchhhHHHHHhccCCCcchhHHHHHHHhhhhhHHHHhhhhHHHHhhhcCCcchhHhhhhHHHHHHHHHHhhccc
Q 021674            1 MGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVWLSKAHS   80 (309)
Q Consensus         1 ~Gig~g~~~p~~~~~i~~~~p~~~rg~~~g~~~~~~~~g~~lg~~l~~~l~~~~gWr~~F~i~~~~~~v~~~~~~~~~~~   80 (309)
                      ||++.+...|+..+++.+++|++||++++|+.+++.++|.++|+++++++.+..|||+.|+..++..++.. +.....++
T Consensus       118 ~gi~~a~~~p~~~a~l~~~~~~~~~~~a~~~~~~~~~ig~~igp~l~g~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~  196 (1140)
T PRK06814        118 MGIHSALFGPIKYSILPDHLNKDELLGANALVEAGTFIAILLGTIIGGLATISGNFVILVALLMGIAVLGW-LASLFIPK  196 (1140)
T ss_pred             HHHHHHhhchHHHHhhHhhcCccccchhhHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHH-HHHhhCCC
Confidence            58899999999999999999999999999999999999999999999999999999999955444444332 22223333


Q ss_pred             CCCCCCCCCHHHHHHHHhccCCCCCCCCCChhHhhcchHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhCCCccchhhHh
Q 021674           81 SPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFC  160 (309)
Q Consensus        81 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~wlp~~l~~~~g~s~~~~g~~~  160 (309)
                      .+++++..+.... ...      +.  ...++.+.++|.+|...+..++.+...+.+.+|+|.|+++.+|.++.+.|++.
T Consensus       197 ~~~~~~~~~~~~~-~~~------~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~~~~~~g~~~  267 (1140)
T PRK06814        197 TGNAAPDLKIDRN-IIR------ST--ITLLKYAKADKRIWLAILGISWFWLVGAVVLSQLPLLAKETLGGDENVATLFL  267 (1140)
T ss_pred             CCCCCCCCeeccc-hHH------HH--HHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhHHHHHHHcCCchHHHHHHH
Confidence            3222111110000 000      00  11356778999999888777777777788889999999999999999999999


Q ss_pred             hhhHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHhhHHHHHHHH---------------HhhccCchHHH-HHHHH
Q 021674          161 VLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLT---------------QLSHVDSPAMA-VLCMA  224 (309)
Q Consensus       161 ~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~-~~~~~  224 (309)
                      +...+++.+|.++.|+++||..+++.....    ....+.....+...               .+....+.+.. +..+.
T Consensus       268 ~~~~~g~~ig~~~~g~l~~~~~~~~~~~~~----~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  343 (1140)
T PRK06814        268 AVFSVGVAVGSFLASKLSEGRITLLYVPIG----ALLMGLFGLDLAFASSSVPAEPAQLKSILVFLSKRHGWRILIDLFG  343 (1140)
T ss_pred             HHHHHHHHHHHHHHHHHhCCceeeeeehHH----HHHHHHHHHHHHhcccccccccccccchhhhhcccccHHHHHHHHH
Confidence            999999999999999999876654322111    01111100001110               00000122222 22222


Q ss_pred             HHHhhhhhhhcchhhhh-hccCCCchHHHHHHHhHhHhhhhhHHHhHHHhhccc-CCchHHHHHHHHH
Q 021674          225 CSQGTDAFSQSGLYSNH-QDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQH-GSWDDVFKVSVGL  290 (309)
Q Consensus       225 ~~~~~~~~~~~~~~~~~-~~~~~~~~g~a~~~~~~~~~lgg~i~~~~~g~l~~~-~~~~~~~~~~~~~  290 (309)
                      .+++.+.+ .....+.. ...+++.+|.+.|+.|+..+++..+++.+.|.+.+. .++...+++...+
T Consensus       344 ~g~~~~~~-~~~~~~~~~~~~p~~~~G~v~g~~~~~~~~~~~ig~~~~g~l~~~~~~~~~~~~~~~~~  410 (1140)
T PRK06814        344 LAAAGGLY-IVPLFAALQAWANPAHRARVIAANNVLNAAFMVAGTIILALLQALGFSIPWIILFIALA  410 (1140)
T ss_pred             HHHHHHHh-HHHHHHHHHhhCCcccceeeeHHHHHHHHHHHHHHHHHHHHHHHhccCHHHHHHHHHHH
Confidence            23222222 12233333 345667899999999999999999999999999754 4555555544433

>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters

Probab=99.86  E-value=2.8e-19  Score=160.27  Aligned_cols=250  Identities=29%  Similarity=0.491  Sum_probs=183.2

Q ss_pred             CCcccccchhhHHHHHhccCCCcchhHHHHHHHhhhhhHHHHhhhhHHHHhhhcCCcchhHhhhhHHHHHHHHHHhhccc
Q 021674            1 MGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVWLSKAHS   80 (309)
Q Consensus         1 ~Gig~g~~~p~~~~~i~~~~p~~~rg~~~g~~~~~~~~g~~lg~~l~~~l~~~~gWr~~F~i~~~~~~v~~~~~~~~~~~   80 (309)
                      +|++.+...|...+++.|++|+|||++++++.....++|..+++.+++.+.++.+||+.|++.+.+.++..+..... + 
T Consensus        97 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-  174 (352)
T cd06174          97 LGLGGGALYPAAAALIAEWFPPKERGRALGLFSAGFGLGALLGPLLGGLLAESLGWRWLFLILAILGLLLALLLLFL-L-  174 (352)
T ss_pred             HHcccccccHhHHHHHHHhCCccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHH-H-
Confidence            47888999999999999999999999999999999999999999999999999999999998777665543322111 0 


Q ss_pred             CCCCCCCCCHHHHHHHHhccCCCCCCCCCChhHhhcchHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhCCCccchhhHh
Q 021674           81 SPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFC  160 (309)
Q Consensus        81 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~wlp~~l~~~~g~s~~~~g~~~  160 (309)
                                                           |+++......++..........+.|.++++..|.+..+.+...
T Consensus       175 -------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  217 (352)
T cd06174         175 -------------------------------------RLLLLLALAFFLLSFGYYGLLTYLPLYLQEVLGLSAAEAGLLL  217 (352)
T ss_pred             -------------------------------------HHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCHHHHHHHH
Confidence                                                 4455566666777777888899999999988899999999999


Q ss_pred             hhhHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHhhHHHHHHHHHhhccCchHHHH-HHHHHHHhhhhhhhcchhh
Q 021674          161 VLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSPAMAV-LCMACSQGTDAFSQSGLYS  239 (309)
Q Consensus       161 ~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~  239 (309)
                      ....++..++.++.|+++||+++|+.       .+. .+..............++..... .....+.+.+ ...+....
T Consensus       218 ~~~~~~~~i~~~~~~~~~~~~~~~~~-------~~~-~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~  288 (352)
T cd06174         218 SLFGLGGILGALLGGLLSDRLGRRRL-------LLL-IGLLLAALGLLLLALAPSLALLLVALLLLGFGLG-FAFPALLT  288 (352)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhhH-------HHH-HHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHh-ccchhHHH
Confidence            99999999999999999999987631       111 11111111111112222232222 2222222222 11122222


Q ss_pred             hhhcc-CCCchHHHHHHHhHhHhhhhhHHHhHHHhhcccCCchHHHHHHHHHHHHHHHHH
Q 021674          240 NHQDI-APRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSWDDVFKVSVGLYLVGTAVW  298 (309)
Q Consensus       240 ~~~~~-~~~~~g~a~~~~~~~~~lgg~i~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~  298 (309)
                      ...+. ++++++...++.+...++++.++|.+.|.+.|..+|...+.+.+++.+++.+..
T Consensus       289 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~g~l~~~~~~~~~~~~~~~~~~i~~i~~  348 (352)
T cd06174         289 LASELAPPEARGTASGLFNTFGSLGGALGPLLAGLLLDTGGYGGVFLILAALALLAALLL  348 (352)
T ss_pred             HHHhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCcchHHHHHHHHHHHHHHHh
Confidence            23333 447899999999999999999999999999998889998888887777766554

MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3

>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family

Probab=99.85  E-value=5.7e-19  Score=162.06  Aligned_cols=261  Identities=14%  Similarity=0.162  Sum_probs=170.5

Q ss_pred             hhHHHHHhccCCCcchhHHHHHHHhhhhhHHHHhhhhHHHHhhhcCCcchhHhhhhHHHHHHHHHHhhcccCCCCCCCCC
Q 021674           10 PAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVWLSKAHSSPAEDPQLR   89 (309)
Q Consensus        10 p~~~~~i~~~~p~~~rg~~~g~~~~~~~~g~~lg~~l~~~l~~~~gWr~~F~i~~~~~~v~~~~~~~~~~~~p~~~~~~~   89 (309)
                      +..-++..|+.++|+++...+....+..+|.++|..+.+++.+++|||..|++.+.+.++..+..+. .+|+++++++  
T Consensus       116 ~~~d~~~~~~~~~~~~~~~~~~~~~g~~lG~~~g~~~~~~l~~~~gw~~~f~~~a~l~~~~~~~~~~-~~~~~~~~~~--  192 (390)
T TIGR02718       116 IATDGMAAEHFNGRTLAKGNAVQIAGVMIGFFGGGAGTLVLFGKFGQRPAFLLVACVPLASLVCVLW-LKDRAVASPE--  192 (390)
T ss_pred             HHHHHHHHHhCCHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHH-cCCCCcCccc--
Confidence            3344467788888888988888999999999999999999999999999999988777654433322 2222111110  


Q ss_pred             HHHHHHHHhccCCCCCCCCCChhHhhcchHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhCCCccchhhHhhhhHH-HHH
Q 021674           90 PAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWL-TMA  168 (309)
Q Consensus        90 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~wlp~~l~~~~g~s~~~~g~~~~~~~~-~~~  168 (309)
                       +++          +  +..++++++|+|..|......++...+.....+|.|.|++| +|+|+.+.|.+.....+ ...
T Consensus       193 -~~~----------~--~~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~-~G~s~~~ig~~~~~~~~~~~~  258 (390)
T TIGR02718       193 -APL----------A--RRASLFRFFRRPLAWSLLALALLSAMTAVSGFGLSKLYLVD-AGWPLEWIGRLGMAGGAVTVL  258 (390)
T ss_pred             -cch----------h--hHHHHHHHHcCcCHHHHHHHHHHHHHHHHHHHHHhhHHHHh-cCCCHHHHHHHHhHHHHHHHH
Confidence             000          0  01235678899988877777777777778888899999987 69999999998877764 667


Q ss_pred             HHHHHHHHHHHHHHHcCCChhhHHHHHHHHhhH-HHHHHHHHhhc---cCchHHHHHHHHHH-Hhhhhhhhcchhhh-hh
Q 021674          169 FSANLGGWIADTLVSKGLSVTTVRKIMQSIGFL-GPAFFLTQLSH---VDSPAMAVLCMACS-QGTDAFSQSGLYSN-HQ  242 (309)
Q Consensus       169 ig~~~~G~l~dr~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~~~---~~~~~~~~~~~~~~-~~~~~~~~~~~~~~-~~  242 (309)
                      ++..++|++.||+++|+....       ..... ...+.......   ...+.....+.... +..+ ......+.. .+
T Consensus       259 ~g~~~~g~l~~r~g~~~~l~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g-~~~~~~~~~~~~  330 (390)
T TIGR02718       259 LGCGGGAWLVRRAGLWRTFIL-------GVGLAGSLALLWFAQAAFWLAPGIAVAWSCSAFGSLITG-ITSVAIYTAFMR  330 (390)
T ss_pred             HHHHHHHHHHHHhhHHHHHHH-------HHHHHHHHHHHHHHHHHcccCCcHHHHHHHHHHHHHHHH-HHHHHHHHHHHH
Confidence            788999999999997642111       11000 00111111011   11222211111111 1111 111222222 22


Q ss_pred             ccCC-CchHHHHHHHhHhHhhhhhHHHhHHHhhcccCCchHHHHHHHHHHHHHH
Q 021674          243 DIAP-RYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSWDDVFKVSVGLYLVGT  295 (309)
Q Consensus       243 ~~~~-~~~g~a~~~~~~~~~lgg~i~~~~~g~l~~~~~~~~~~~~~~~~~~~~~  295 (309)
                      ..++ +.+++..++.|...++|+.++|.+.|.+.|+.+++..|.+.+++.+++.
T Consensus       331 ~~~~~~~~g~~~~~~~~~~~lg~~~g~~~~G~l~~~~G~~~~f~~~~~~~l~a~  384 (390)
T TIGR02718       331 FAGDGDQAGTDVTAVQSTRDLGELIASSIAGYLTDRFGYAGGFLSGTVLAVLAI  384 (390)
T ss_pred             HhCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHH
Confidence            3344 6789999999999999999999999999998889888888776666554

RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.

>PRK09528 lacY galactoside permease; Reviewed

Probab=99.85  E-value=1.9e-20  Score=173.49  Aligned_cols=274  Identities=11%  Similarity=0.105  Sum_probs=164.9

Q ss_pred             HHHhccCC--CcchhHHHHHHHhhhhhHHHHhhhhHHHHhhhcCCcchhHhhhhHHHHHHHHHHhhcccCCCCCCCCCHH
Q 021674           14 NILSKWVP--VAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVWLSKAHSSPAEDPQLRPA   91 (309)
Q Consensus        14 ~~i~~~~p--~~~rg~~~g~~~~~~~~g~~lg~~l~~~l~~~~gWr~~F~i~~~~~~v~~~~~~~~~~~~p~~~~~~~~~   91 (309)
                      ..+.+|.+  +++|++..|......++|..+++++++.+.+ .+||+.|++.+++.++.....+...+|++++ ++.+++
T Consensus       126 ~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~-~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~  203 (420)
T PRK09528        126 GAIEAYIERVSRRSGFEYGRARMWGSLGWALCAFIAGILFN-INPQINFWLGSGSALILLVLLFFAKPDAPST-AKVANA  203 (420)
T ss_pred             hhhhhHHHHHHhhccccchhhHHhhhHHHHHHHHHHHHHHh-cCchHhHHHHHHHHHHHHHHHhcccccccch-hhhccc
Confidence            33445544  3567888899999999999999999998876 5999999987766665443433322332221 110000


Q ss_pred             HHHHHHhccCCCCCCCCCChhHhhcchHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHh---CCCccchhhHhhhhHHHHH
Q 021674           92 EKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVL---HFNLTESGLFCVLPWLTMA  168 (309)
Q Consensus        92 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~wlp~~l~~~~---g~s~~~~g~~~~~~~~~~~  168 (309)
                      ++       .++++.+..+.++++|||++|.+.+..++....+.....+.|.|+.+..   +.+..+.+....+..++..
T Consensus       204 ~~-------~~~~~~~~~~~~~~l~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~  276 (420)
T PRK09528        204 LG-------ANASAVSLKDALALLKLPKFWFLVLYVIGVACFYDVFDQQFPNFFASFFATPEQGTRVFGYLNSFQVFLEA  276 (420)
T ss_pred             hh-------cccccccHHHHHHHccCCCeEeehHHHHHHHHHHHHHHHHHHHHHHHHHhccCcchHHHHHHHHHHHHHHH
Confidence            00       0011111112445788998876655544444444556678899887653   5566677888888888889


Q ss_pred             HHHHHHHHHHHHHHHcCCChhhHHHHHHHHhhHHHHHHHHHhhccCchHHHHHH-HHHHHhhhhhhhcchhhh-hhccCC
Q 021674          169 FSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSPAMAVLC-MACSQGTDAFSQSGLYSN-HQDIAP  246 (309)
Q Consensus       169 ig~~~~G~l~dr~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~-~~~~~~  246 (309)
                      ++.++.|+++||+++|+...         .+..............++++..+.. ...+.+.... ....... ....++
T Consensus       277 ~~~~~~g~l~dr~g~~~~~~---------~~~~l~~~~~~l~~~~~~~~~~~~~~~l~g~~~~~~-~~~~~~~~~~~~~~  346 (420)
T PRK09528        277 LIMFFAPFIINRIGAKNALL---------LAGTIMAVRIIGSGFATGPLEVSILKLLHAFEVPFL-LVGVFKYITLNFDV  346 (420)
T ss_pred             HHHHHHHHHHHHhCcchhhH---------HHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHcCc
Confidence            99999999999999774211         1111111111112223344433222 1112111111 1111122 223455


Q ss_pred             CchHHHHHH-HhHhHhhhhhHHHhHHHhhcccCCchHHHHHHHHHHHHHHHHHHhhcCCcc
Q 021674          247 RYSGVLLGL-SNTAGVLAGVFGTAATGYILQHGSWDDVFKVSVGLYLVGTAVWNLFSTGEK  306 (309)
Q Consensus       247 ~~~g~a~~~-~~~~~~lgg~i~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  306 (309)
                      +.+++..+. .|+...+|++++|.+.|++.|..||+..|...+++.++..++...+.++++
T Consensus       347 ~~~a~~~~~~~~~~~~lg~~ig~~~~G~l~~~~G~~~~f~~~~~~~~i~~~~~~~~~~~~~  407 (420)
T PRK09528        347 RLSATIYLVGFQFAKQLGAVFLSTLAGNLYDSIGFQGTYLILGGIVLLFTLISVFTLSGDR  407 (420)
T ss_pred             cceeeeeeehHHHHHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHhcCCc
Confidence            667766554 678889999999999999999988999999887777766666555554433

>TIGR00898 2A0119 cation transport protein

Probab=99.84  E-value=4.9e-19  Score=167.82  Aligned_cols=287  Identities=14%  Similarity=0.037  Sum_probs=161.3

Q ss_pred             CCcccccchhhHHHHHhccCCCcchhHHHHHHHhhhhhHHHHhhhhHHHHhhhcCCcchhHhhhhHHHHHHHHHHhhccc
Q 021674            1 MGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVWLSKAHS   80 (309)
Q Consensus         1 ~Gig~g~~~p~~~~~i~~~~p~~~rg~~~g~~~~~~~~g~~lg~~l~~~l~~~~gWr~~F~i~~~~~~v~~~~~~~~~~~   80 (309)
                      +|++.++..|....++.|++|+++|+++.++...+..+|.++++.++..+.+   ||+.|++.+++.++..+.+ ...+|
T Consensus       190 ~G~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~---wr~~~~~~~i~~~~~~~~~-~~~~e  265 (505)
T TIGR00898       190 VGMGIGGIWVQAVVLNTEFLPKKQRAIVGTLIQVFFSLGLVLLPLVAYFIPD---WRWLQLAVSLPTFLFFLLS-WFVPE  265 (505)
T ss_pred             HHhhccchHHHHHHHhheecChhhhHHHHHHHHHHHHHHHHHHHHHHHHhhH---HHHHHHHHHHHHHHHHHHH-HhcCC
Confidence            5889999999999999999999999999999999999999999988876644   9999998887776554333 45677


Q ss_pred             CCCCCC-CCCHHHH-HHH----Hhc--------------cCCCCCCCCCChhHhhcchHHHHHHHHHHHHHHHHHHHHHh
Q 021674           81 SPAEDP-QLRPAEK-KLI----VSS--------------CASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTW  140 (309)
Q Consensus        81 ~p~~~~-~~~~~~~-~~~----~~~--------------~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~w  140 (309)
                      +|+... +.+.+|. +..    ..+              +..+++.++.++++++|+|+++.......+.... ..+.++
T Consensus       266 sp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~-~~~~~~  344 (505)
T TIGR00898       266 SPRWLISQGRIEEALKILQRIAKINGKKLPAEVLSLSLEKDLSSSKKQYSFLDLFRTPNLRKTTLCLMMLWFT-TAFSYY  344 (505)
T ss_pred             ChHHHHHCCCHHHHHHHHHHHHHHcCCCCCHHHHhhhhhhhhhhccCCCcHHHHhCChHHHHHHHHHHHHHHH-HHHHHH
Confidence            664210 1111111 100    000              0000011123567889999887654443322221 122222


Q ss_pred             HHHHHHHHhCCCccchhhHhhhhHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHhhHHHHHH--HHHhhccCchHH
Q 021674          141 MPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFF--LTQLSHVDSPAM  218 (309)
Q Consensus       141 lp~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~  218 (309)
                      ...+..+..+.+..   .......+...++.++.++++||++||+.        +. ...+...+.  ............
T Consensus       345 ~~~~~~~~~~~~~~---~~~~~~~~~~i~~~~~~~~l~dr~grr~~--------~~-~~~~~~~~~~l~~~~~~~~~~~~  412 (505)
T TIGR00898       345 GLVLDLGNLGGNIY---LDLFISGLVELPAKLITLLLIDRLGRRYT--------MA-ASLLLAGVALLLLLFVPVDLYFL  412 (505)
T ss_pred             HHhccccccCCChH---HHHHHHHHHHHHHHHHHHHHHHHhCCHHH--------HH-HHHHHHHHHHHHHHHcCCCchHH
Confidence            22222223344422   33334566778889999999999987631        11 111111111  111111121122


Q ss_pred             HHHHHHH-HHhhhhhhhcchhhhhhccCC-CchHHHHHHHhHhHhhhhhHHHhHHHhhcccCCchHHHHHHHHHHHHHH-
Q 021674          219 AVLCMAC-SQGTDAFSQSGLYSNHQDIAP-RYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSWDDVFKVSVGLYLVGT-  295 (309)
Q Consensus       219 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~-~~~g~a~~~~~~~~~lgg~i~~~~~g~l~~~~~~~~~~~~~~~~~~~~~-  295 (309)
                      ....... .++.. ......+....|..| +.|+.+.|+.++.+++|++++|.+.+ +.+ .++...+.+.+++.+++. 
T Consensus       413 ~~~~~~~~~~~~~-~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~ig~~i~p~i~~-~~~-~~~~~~~~~~~~~~~~~~~  489 (505)
T TIGR00898       413 RTALAVLGKFGIT-SAFQMVYLYTAELYPTVVRNLGVGVCSTMARVGSIISPFLVY-LGE-KWLFLPLVLFGGLALLAGI  489 (505)
T ss_pred             HHHHHHHHHHHHH-HHHHHHHHHhcccccHHHHhhhHhHHHHHHHHHHHHHhHHHH-HHH-HHHhhHHHHHHHHHHHHHH
Confidence            2221111 11111 111222333344444 67999999999999999999999998 433 334445555444444443 


Q ss_pred             HHHHhhcCCccc
Q 021674          296 AVWNLFSTGEKV  307 (309)
Q Consensus       296 ~~~~~~~~~~~~  307 (309)
                      +.+.+..|+++.
T Consensus       490 ~~~~lpet~~~~  501 (505)
T TIGR00898       490 LTLFLPETKGVP  501 (505)
T ss_pred             HHHcCcCCCCCC
Confidence            333344555544

>TIGR00901 2A0125 AmpG-related permease

Probab=99.84  E-value=3.3e-19  Score=161.46  Aligned_cols=168  Identities=15%  Similarity=0.100  Sum_probs=124.0

Q ss_pred             cccchhhHHHHHhccCCCcchhHHHHHHHhhhhhHHHHhhhhHHHHhhhcC--------CcchhHhhhhHHHHHHHHHHh
Q 021674            5 EGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFG--------WPSVFYSFGSLGTVWFTVWLS   76 (309)
Q Consensus         5 ~g~~~p~~~~~i~~~~p~~~rg~~~g~~~~~~~~g~~lg~~l~~~l~~~~g--------Wr~~F~i~~~~~~v~~~~~~~   76 (309)
                      .+...|+..+++.|++|+|||+++.++...+.++|.++++.+++.+.+++|        ||..|++.+++.++.....+.
T Consensus        97 ~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~~~~g~~~~~~~~wr~~f~i~ai~~l~~~~~~~~  176 (356)
T TIGR00901        97 SATQDIALDAWRLEILSDEELGYGSTIYIVGYRAGMLLSGSLALVLASPEFANTGLITLWGYIFFWTALLILPGLLVTLF  176 (356)
T ss_pred             HHHHHHHHHHHHHHhCCHhhhchHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccccccHHHHHHHHHHHHHHHHHHHH
Confidence            344557778899999999999999999999999999999999999999988        999999877766554322222


Q ss_pred             hcccCCCCCCCCCHHHHHHHHhccCCCCCCCCCChhHhhcchH---HHHHHHHHHHHHHHHHHHHHhHHHHHHHHhCCCc
Q 021674           77 KAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPP---VWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNL  153 (309)
Q Consensus        77 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~---~~~~~~~~~~~~~~~~~~~~wlp~~l~~~~g~s~  153 (309)
                      ..+| |+++++.++++++       +  .  ..++++++|+|.   .+...+..++.....+...+|+|+|+++ +|+++
T Consensus       177 ~~~e-~~~~~~~~~~~~~-------~--~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~g~~~  243 (356)
T TIGR00901       177 LAKE-PQEDASVPKPLTQ-------A--V--LKPIREFFQRKNMIQALLLLLLIVLYKLGDSAATVLTTLFLLD-MGFSK  243 (356)
T ss_pred             hccC-CCcccccchhHHH-------H--H--HHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCCH
Confidence            2333 2221111111110       0  0  113456777765   6666666666677788899999999988 89999


Q ss_pred             cchhhHhhhhH-HHHHHHHHHHHHHHHHHHHcC
Q 021674          154 TESGLFCVLPW-LTMAFSANLGGWIADTLVSKG  185 (309)
Q Consensus       154 ~~~g~~~~~~~-~~~~ig~~~~G~l~dr~~~r~  185 (309)
                      .+.+.+....+ ++..++.+++|+++||+++|+
T Consensus       244 ~~~g~~~~~~~~~~~~~g~~~~g~l~~r~g~~~  276 (356)
T TIGR00901       244 EEIALVAKINGLLGAILGGLIGGIIMQPLNILY  276 (356)
T ss_pred             HHHHHHhHHHHHHHHHHHHHHHHHHHhhhhHHH
Confidence            99988876655 577899999999999999764

>TIGR00882 2A0105 oligosaccharide:H+ symporter

Probab=99.82  E-value=1.4e-18  Score=159.79  Aligned_cols=275  Identities=11%  Similarity=0.040  Sum_probs=165.5

Q ss_pred             ccccchhhHHHHHhccCCCcchhHHHHHHHhhhhhHHHHhhhhHHHHhhhcCCcchhHhhhhHHHHHHHHHHhhcccCCC
Q 021674            4 GEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVWLSKAHSSPA   83 (309)
Q Consensus         4 g~g~~~p~~~~~i~~~~p~~~rg~~~g~~~~~~~~g~~lg~~l~~~l~~~~gWr~~F~i~~~~~~v~~~~~~~~~~~~p~   83 (309)
                      +.+...|....+..+.-  +++++..|......++|.++|+++++.+.+ .|||..|++.+.++++..++.+...+|+|+
T Consensus       112 ~~~~~~~~~~~~~~~~~--~~~~~~~g~~~~~~~~g~~~g~~~~g~l~~-~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~  188 (396)
T TIGR00882       112 VFSAGAGAIEAYIEKVS--RNSNFEYGKARMFGCVGWALCASIAGILFS-IDPQIVFWLGSGFALILMLLLMFAKPKAPS  188 (396)
T ss_pred             HhccchhhHHHHHHHhh--hhcccccchhhhhcccHHHHHHHHHhhhhc-cCchHHHHHHHHHHHHHHHHHHHhCCCCch
Confidence            34444555544444421  344567788888889999999999998765 699999998887777654333332333221


Q ss_pred             CCCCCCHHHHHHHHhccCCCCCCCCCChhHhhcchHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHh---CCCccchhhHh
Q 021674           84 EDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVL---HFNLTESGLFC  160 (309)
Q Consensus        84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~wlp~~l~~~~---g~s~~~~g~~~  160 (309)
                      ++ +    .++   ..+.++++.+..+.++++|||++|......++....+.....|.|.|+++..   +.+..+.|...
T Consensus       189 ~~-~----~~~---~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~g~~~  260 (396)
T TIGR00882       189 SA-T----VAN---ALGANASAFSLKLALELFRQRKFWMFVLYVVGVACVYDVFDQQFANFFTSFFATPQQGTRVFGYVT  260 (396)
T ss_pred             hh-h----hhc---ccccccCCCCHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccchHHHHHHH
Confidence            11 0    000   0000111111234678899999887666655555555566678999998765   45556678888


Q ss_pred             hhhHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHhhHHHHHHHHHhhccCchHHHHHHH-HHHHhhhhhhhcchhh
Q 021674          161 VLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSPAMAVLCM-ACSQGTDAFSQSGLYS  239 (309)
Q Consensus       161 ~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~  239 (309)
                      ....+...++....|++.||+++|+...         .+..............++++...... ..+.+. +........
T Consensus       261 ~~~~i~~~~~~~~~g~l~~r~g~~~~l~---------~~~~l~~l~~~~~~~~~~~~~~~~~~~l~g~~~-~~~~~~~~~  330 (396)
T TIGR00882       261 TMGELLNALIMFCAPLIINRIGAKNALL---------IAGTIMSVRIIGSSFATTALEVVILKMLHAFEV-PFLLVGCFK  330 (396)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhccchhHH---------HHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHH-HHHHHHHHH
Confidence            8888888889999999999999774211         11111111111112233444332222 112211 111111111


Q ss_pred             h-hhccCCCchHHHHHH-HhHhHhhhhhHHHhHHHhhcccCCchHHHHHHHHHHHHHHHHHH
Q 021674          240 N-HQDIAPRYSGVLLGL-SNTAGVLAGVFGTAATGYILQHGSWDDVFKVSVGLYLVGTAVWN  299 (309)
Q Consensus       240 ~-~~~~~~~~~g~a~~~-~~~~~~lgg~i~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~  299 (309)
                      . ....+++.++++.+. .|....+|++++|.+.|++.|..||+..|.+.+++.++..++-.
T Consensus       331 ~~~~~~~~~~~at~~~~~~~~~~~lg~~~~~~l~G~l~~~~G~~~~f~~~~~~~~i~~~~~~  392 (396)
T TIGR00882       331 YITSQFDVRLSATIYLIGFQFAKQLAMIFLSTLAGNMYDSIGFQGAYLVLGCIVLLFTLISV  392 (396)
T ss_pred             HHHHhCCcceEEEeehHHHHHHHHHHHHHHHHhHHHHHHhcccHHHHHHHHHHHHHHHHHHH
Confidence            1 222345555655544 57888999999999999999988899999988888777765543

>PRK10054 putative transporter; Provisional

Probab=99.82  E-value=1.2e-18  Score=160.38  Aligned_cols=264  Identities=12%  Similarity=0.074  Sum_probs=161.1

Q ss_pred             ccccchhhHHHHHhccCCCcchhHHHHHHHhhhhhHHHHhhhhHHHHhhhcCCcchhHhhhhHHHHHHHHHHhhcccCCC
Q 021674            4 GEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVWLSKAHSSPA   83 (309)
Q Consensus         4 g~g~~~p~~~~~i~~~~p~~~rg~~~g~~~~~~~~g~~lg~~l~~~l~~~~gWr~~F~i~~~~~~v~~~~~~~~~~~~p~   83 (309)
                      +.+...|.......|.+|+++|+++.|+.+...++|.++++++++++.+ .|||.+|++.+++.++..+......+|+++
T Consensus       109 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~lg~~igp~l~~~l~~-~g~~~~f~~~~~~~~i~~i~~~~~~~~~~~  187 (395)
T PRK10054        109 AYSVFSTVLKAWFADNLSSTSKTKIFSLNYTMLNIGWTVGPPLGTLLVM-QSINLPFWLAAICSAFPLVFIQIWVQRSEK  187 (395)
T ss_pred             HHHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hccCcHHHHHHHHHHHHHHHHHHHHhcccc
Confidence            3445567788888999999999999999999999999999999998875 799999998776665543322222332211


Q ss_pred             CCCCCCHHHHHHHHhccCCCCCCCCCChhHhhcchHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHh--CCCccchhhHhh
Q 021674           84 EDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVL--HFNLTESGLFCV  161 (309)
Q Consensus        84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~wlp~~l~~~~--g~s~~~~g~~~~  161 (309)
                      +++    ++++        +    ..+.++++|||++|......++.......+..|.+.|+.+..  +.+....+.+..
T Consensus       188 ~~~----~~~~--------~----~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~  251 (395)
T PRK10054        188 AIA----TETG--------S----VWSPSVLLQDKALLWFTCSGFLASFVSGAFASCISQYVMVVADSDFAEKVVAVVLP  251 (395)
T ss_pred             ccc----cchh--------h----hhhhhhhccCceehHHHHHHHHHHHHHHHhhhhHHHHHHHhcccchHHHHHHHHHH
Confidence            110    0000        0    011256788999888777777766666677789999987543  444455566666


Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHhhHHHHHHHHHhhc-cCchH-HHHHHHHHHHhhhhhhhcchhh
Q 021674          162 LPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSH-VDSPA-MAVLCMACSQGTDAFSQSGLYS  239 (309)
Q Consensus       162 ~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~  239 (309)
                      ...+.........|++.||.++|+.        + ..++............ .++.. +.+.....+.+... ..+....
T Consensus       252 ~~~~~~~~~~~~~g~~~~~~~~~~~--------l-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~~p~~~~  321 (395)
T PRK10054        252 VNAAMVVSLQYSVGRRLNAANIRPL--------M-TAGTLCFVIGLVGFIFSGNSLLLWGMSAAVFTVGEII-YAPGEYM  321 (395)
T ss_pred             hhhhheeeehhHHHHHHccCCchhH--------H-HHHHHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHH-HHhhHHH
Confidence            6666666666788889998765531        1 1111111111111111 12222 21222222222111 1112222


Q ss_pred             hhhc-cCCCchHHHHHHHhHhHhhhhhHHHhHHHhhcccCCchHHHHHHHHHHHHHH
Q 021674          240 NHQD-IAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSWDDVFKVSVGLYLVGT  295 (309)
Q Consensus       240 ~~~~-~~~~~~g~a~~~~~~~~~lgg~i~~~~~g~l~~~~~~~~~~~~~~~~~~~~~  295 (309)
                      ...+ .+++.++...+..+ ...+|..+||.+.|.+.|+.+....|.+.+.+..++-
T Consensus       322 ~~~~~~p~~~~~~~~~~~~-~~~~G~~~Gp~~~G~l~~~~g~~~~~~~~~~~~~~~~  377 (395)
T PRK10054        322 LIDHIAPPGMKASYFSAQS-LGWLGAAINPLVSGVILTTLPPWSLFVILALAIVAAW  377 (395)
T ss_pred             HHHHhCCcccceehHhHHH-HHHHHHHHHHHHHHHHHHHcChhhHHHHHHHHHHHHH
Confidence            2222 34567788887655 5778999999999999999888777776555544333

>TIGR00885 fucP L-fucose:H+ symporter permease

Probab=99.82  E-value=3e-18  Score=158.32  Aligned_cols=268  Identities=13%  Similarity=0.100  Sum_probs=165.2

Q ss_pred             CCcccccchhhHHHHHhccCCCcchhHHHHHHHhhhhhHHHHhhhhHHHHhh--------------------------hc
Q 021674            1 MGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIH--------------------------RF   54 (309)
Q Consensus         1 ~Gig~g~~~p~~~~~i~~~~p~~~rg~~~g~~~~~~~~g~~lg~~l~~~l~~--------------------------~~   54 (309)
                      +|+|.|...+....++.+..|+|+|++.+++.+...++|..+++.+++.+..                          ..
T Consensus       104 ~G~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~~g~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  183 (410)
T TIGR00885       104 LTAGLGFLETAANPYILVMGPESTATRRLNLAQSFNPFGSIIGMVVAQQLILSNLPHQSQDVLDKLSPEELSAIKHSDLA  183 (410)
T ss_pred             HHhhHHHHHhhhhHHHHHHCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccchhhhhhhcCHHHHHHHHHHHHH
Confidence            3778888899999999999999999999999999999999999999887743                          24


Q ss_pred             CCcchhHhhhhHHHHHHHHHHhhcccCCCCCCCCCHHHHHHHHhccCCCCCCCCCChhHhhcchHHHHHHHHHHHHHHHH
Q 021674           55 GWPSVFYSFGSLGTVWFTVWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGT  134 (309)
Q Consensus        55 gWr~~F~i~~~~~~v~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~  134 (309)
                      +||++|.+.+.+.++..+++.+ .+ .|+.++  ++++          +++ ...+.++++|+|+++...+..++.....
T Consensus       184 ~w~~~fl~~a~~~~~~~~~~~~-~~-~p~~~~--~~~~----------~~~-~~~~~~~~~~~~~~~~~~l~~f~yvg~e  248 (410)
T TIGR00885       184 SVQTPYMIIGAVVLAVALLIML-TK-MPALNH--SDAK----------QIS-FSASLSRLARIRHYREGVIAQFFYVGVQ  248 (410)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHH-hc-CCCCCc--cccc----------ccc-chhhHHHHHhChhHHHHHHHHHHHHHHH
Confidence            7999999888877654333322 11 121110  0000          000 0113456789998888777777765566


Q ss_pred             HHHHHhHHHHHHHHh-CCCccchhhHhhhhHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHhhHHHHHHHHHhhcc
Q 021674          135 FILLTWMPTYYNQVL-HFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHV  213 (309)
Q Consensus       135 ~~~~~wlp~~l~~~~-g~s~~~~g~~~~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  213 (309)
                      .+..+|+|.|+++.. +.+...++.+......+..+|.++++++.||.++|+        .+..... ....+.......
T Consensus       249 ~~~~s~l~~y~~~~~~~~~~~~a~~~~~~~~~~~~vGR~~~~~l~~r~~~~~--------~l~i~~~-~~~~~~ll~~~~  319 (410)
T TIGR00885       249 IMCWTFIIQYAVRLIPGMTAGFAANYNIGAMVIFFISRFIGTWLISYLAAHK--------VLMAYAI-IGMALCLGSIFA  319 (410)
T ss_pred             HHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHH--------HHHHHHH-HHHHHHHHHHHc
Confidence            678899999997532 334344455566666788999999999999997663        1211111 111111111122


Q ss_pred             CchHHHHHHHHHHHhhhhhhhcchhhhhhccCCCchHHHHHHHhHhHhhhhhHHHhHHHhhcccC------CchHHHHHH
Q 021674          214 DSPAMAVLCMACSQGTDAFSQSGLYSNHQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQHG------SWDDVFKVS  287 (309)
Q Consensus       214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~a~~~~~~~~~lgg~i~~~~~g~l~~~~------~~~~~~~~~  287 (309)
                      +.......+..+++... ...+..++...+.-+++...+.+...+. -+|+++.|.+.|.+.|+.      +++..|.+.
T Consensus       320 ~~~~~~~~l~~~glf~s-~~fp~i~sl~~~~~g~~~~~~s~~l~~~-~~Gga~~p~l~G~~~d~~~~~~~~~~~~~~~~~  397 (410)
T TIGR00885       320 GGHVGLYCLTLCSAFMS-LMFPTIYGIALKGLGQDTKYGAAGLVMA-IIGGGIVPPLQGFIIDMKEIAAAPAVNTSFILP  397 (410)
T ss_pred             CChHHHHHHHHHHHHHH-HHHHHHHHHHHhhhhhhhhhhHHHHHHH-HhccchHHHHHHHHHHHhcccccCccchHHHHH
Confidence            22222222222222221 1123344433333333333333333332 389999999999999952      577888877


Q ss_pred             HHHHHHH
Q 021674          288 VGLYLVG  294 (309)
Q Consensus       288 ~~~~~~~  294 (309)
                      ..|++..
T Consensus       398 ~~~~~~~  404 (410)
T TIGR00885       398 LLCFAVI  404 (410)
T ss_pred             HHHHHHH
Confidence            7776544

This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.

>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated

Probab=99.81  E-value=1.5e-18  Score=179.43  Aligned_cols=273  Identities=19%  Similarity=0.148  Sum_probs=170.4

Q ss_pred             CCcccccchhhHHHHHhccCCCcchhHHHHHHHhhhhhHHHHhhhhHHHHhhh--------c-CCcchhHhhhhHHHHHH
Q 021674            1 MGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHR--------F-GWPSVFYSFGSLGTVWF   71 (309)
Q Consensus         1 ~Gig~g~~~p~~~~~i~~~~p~~~rg~~~g~~~~~~~~g~~lg~~l~~~l~~~--------~-gWr~~F~i~~~~~~v~~   71 (309)
                      +|++.|...|+..++++|++|++||++++|+...+.++|.++|+.+++++.+.        + +|++.+.+..+...+..
T Consensus       113 ~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~ig~~lg~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  192 (1146)
T PRK08633        113 LGAQSAIYSPAKYGIIPELVGKENLSRANGLLEAFTIVAILAGTALFSFLFESVNGNTPSEILGRIAPAGLVLLAVAVLG  192 (1146)
T ss_pred             HHHHHHhhchHHHhhhHHhcCcccchhhhhHHHHHHHHHHHHHHHHHHHHHHhhccccccccccchHHHHHHHHHHHHHH
Confidence            47888999999999999999999999999999999999999999999999886        3 45555544333322222


Q ss_pred             HHHHhhcccCCCCCCCCCHHHHHHHHhccCCCCCCCCCChhHhhcchHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhCC
Q 021674           72 TVWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHF  151 (309)
Q Consensus        72 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~wlp~~l~~~~g~  151 (309)
                      ++.....++.|+..+...+.++.       .........++.++++|.++...+..++.....+...+++|.|+++.+|+
T Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~  265 (1146)
T PRK08633        193 LIFAYRLPKVPAAAPEVFDKKKY-------LFPKLLWRNLKLLRSDRVLWLAIIGLSYFWFISQLAQANFPAYAKEVLGL  265 (1146)
T ss_pred             HHHHhcCcCCCCCCccccccccc-------ccHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCC
Confidence            22222334443322111000000       00000012356678888888776666666666777889999999999999


Q ss_pred             Ccc-chhhHhhhhHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHhhHHHHHHHHHhhccCchHHH-HHHHHHHHhh
Q 021674          152 NLT-ESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSPAMA-VLCMACSQGT  229 (309)
Q Consensus       152 s~~-~~g~~~~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~  229 (309)
                      +.. +.+++.....++..++.++.|+++||.++++...         ++.++.++....+....+.... +.++..+++.
T Consensus       266 s~~~~~g~~~~~~~ig~~~g~~~~g~l~~r~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~  336 (1146)
T PRK08633        266 DNTFQVQYLLAASAIGIGIGSLLAGRLSGRHIELGLVP---------LGALGLALSLFLLPTAPSLASVLVLFFLFGFSA  336 (1146)
T ss_pred             CcHHHHHHHHHHHHHHHHHHHHHHHHHhCCceEccchh---------HHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHH
Confidence            998 9999999999999999999999999987654221         1111111111111111222222 2222222222


Q ss_pred             hhhhhcchhhhhh-ccCCCchHHHHHHHhHhHhhhhhHHHhHHHhhccc-CCchHHHHHHHHH
Q 021674          230 DAFSQSGLYSNHQ-DIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQH-GSWDDVFKVSVGL  290 (309)
Q Consensus       230 ~~~~~~~~~~~~~-~~~~~~~g~a~~~~~~~~~lgg~i~~~~~g~l~~~-~~~~~~~~~~~~~  290 (309)
                      +.. .....+... ..+++.+|.+.++.|++.++++.+++.+.+.+... .++...+.+.+.+
T Consensus       337 ~~~-~~~~~~~~~~~~p~~~rg~~~~~~~~~~~lg~~~~~~~~~~l~~~~~~~~~~~~~~~~~  398 (1146)
T PRK08633        337 GLF-IVPLNALIQFRAPEKELGKVLAANNFLQNVGMLLFLALTTLFSGLGLSPAGLFYLIALV  398 (1146)
T ss_pred             HHh-hHHHHHHHhhcCCccchhhhhHHHHHHHHHHHHHHHHHHHHHHHhccCHHHHHHHHHHH
Confidence            211 122223333 34567899999999999999988887776665443 2344445444433

>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter

Probab=99.80  E-value=1.9e-18  Score=160.60  Aligned_cols=250  Identities=13%  Similarity=0.109  Sum_probs=152.4

Q ss_pred             hhhHHHHHhccC-CCcchhHHHHHHHhhhhhHHHHhhhhHHHHhh-------hcCCcchhHhhhhHHHHHHHHHHhhccc
Q 021674            9 MPAMNNILSKWV-PVAERSRSLALVYSGMYLGSVTGLAFSPFLIH-------RFGWPSVFYSFGSLGTVWFTVWLSKAHS   80 (309)
Q Consensus         9 ~p~~~~~i~~~~-p~~~rg~~~g~~~~~~~~g~~lg~~l~~~l~~-------~~gWr~~F~i~~~~~~v~~~~~~~~~~~   80 (309)
                      .+...++..|.. |++||++..++.+.+.++|.+++..+.+.+..       ..|||+.|.+.+++.++......+..+|
T Consensus       117 ~~~~~al~~~~~~~~~~R~~~~~~~~~~~~~g~~l~~~~~~~l~~~~~~~~~~~g~~~~~~i~~~l~~~~~~~~~~~~~e  196 (437)
T TIGR00792       117 NIPYWSLVPAITLDPRERESLSTFRRFGATLGGLLVAVIVLPLVSYFGGGDDKFGWFMFALVLALIGVVSLIICFFGTKE  196 (437)
T ss_pred             cccHhhCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccccHHHHHHHHHHHHHHHHHHHHcCCEe
Confidence            334456677777 67999999999999989988887766655542       4689999998888877665444444454


Q ss_pred             CCCCCCCCCHHHHHHHHhccCCCCCCCCCChhHhhcchHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhCCCccchhhHh
Q 021674           81 SPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFC  160 (309)
Q Consensus        81 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~wlp~~l~~~~g~s~~~~g~~~  160 (309)
                      +++++++    ++       +++.+ -...+++++|||+++......++...+.+....+.|.|++...+ +..+.+.+.
T Consensus       197 ~~~~~~~----~~-------~~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~  263 (437)
T TIGR00792       197 RYSEIPK----NI-------EKKLS-LKQIFKALFKNDQLLILCLAYLFYNLAFNIKNGVQVYYFTYVLG-DPELFSYMG  263 (437)
T ss_pred             cCCCCCc----cc-------ccCCC-HHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHcchhheeEeeecC-ChHHHHHHH
Confidence            4321110    00       00000 01135678899999888777777766666666677777765555 455666677


Q ss_pred             hhhHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHhhHHHHHHHHHhhccCchHHHH-HHHHHHHhhhhhhhcchhh
Q 021674          161 VLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSPAMAV-LCMACSQGTDAFSQSGLYS  239 (309)
Q Consensus       161 ~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~  239 (309)
                      ....++..++.++.++++||+++|+..       ................ ..++..... .....+++.+.. ....++
T Consensus       264 ~~~~i~~ii~~~~~~~l~~r~g~~~~~-------~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~~~~-~~~~~~  334 (437)
T TIGR00792       264 SIAIVAGLIGVLLFPRLVKKFGRKILF-------AGGILLMVLGYLIFFF-AGSNLPLILVLIILAGFGQNFV-TGLVWA  334 (437)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhCcHHHH-------HHHHHHHHHHHHHHHH-cchhHHHHHHHHHHHHHHHHHH-HHHHHH
Confidence            777889999999999999999876321       1111111111111111 112222222 222222222211 111111


Q ss_pred             hhhc--------cCCCchHHHHHHHhHhHhhhhhHHHhHHHhhcccCCc
Q 021674          240 NHQD--------IAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSW  280 (309)
Q Consensus       240 ~~~~--------~~~~~~g~a~~~~~~~~~lgg~i~~~~~g~l~~~~~~  280 (309)
                      ...|        ..++..|.+.|+.|+..++++.+++.+.|.++|..||
T Consensus       335 ~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~g~~lg~~i~g~ll~~~G~  383 (437)
T TIGR00792       335 LVADTVDYGEWKTGVRAEGLVYSVRTFVRKLGQALAGFLVGLILGIIGY  383 (437)
T ss_pred             HHhhhhhhhhhhcCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence            1111        2345689999999999999999999999999886444

GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.

>TIGR00805 oat sodium-independent organic anion transporter

Probab=99.79  E-value=1.1e-18  Score=169.01  Aligned_cols=184  Identities=15%  Similarity=0.225  Sum_probs=136.7

Q ss_pred             CCcccccchhhHHHHHhccCCCcchhHHHHHHHhhhhhHHHHhhhhHHHHhhhc----------------------CCcc
Q 021674            1 MGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRF----------------------GWPS   58 (309)
Q Consensus         1 ~Gig~g~~~p~~~~~i~~~~p~~~rg~~~g~~~~~~~~g~~lg~~l~~~l~~~~----------------------gWr~   58 (309)
                      ||+|++..++...+++.||+|+++|+++++++.++..+|.++|+.+++++.+.+                      +||.
T Consensus       182 ~GiG~~~~~~~~~~~i~d~~~~~~~~~~~~i~~~~~~iG~~lG~llgg~l~~~~~d~~~~~~~~~~l~~~dprWiGaWwl  261 (633)
T TIGR00805       182 RGIGATPIFPLGISYIDDFAKSKNSPLYIGILESIAVFGPAFGYLLGSFCLQIYVDTGSVNTEDVILTPTDPRWIGAWWI  261 (633)
T ss_pred             HhccCCcchhcCchhhhccCCccccHHHHHHHHHHHHhhhHHHHHHHHHHHhcccccccCCCCCCCCCCCCccHHHHHHH
Confidence            699999999999999999999999999999999999999999999999988654                      2677


Q ss_pred             hhHhhhhHHHHHHHHHHhhcccCCCCCC--CCCHHHHHHHHh-ccCC-CC---CCC--CCChhHhhcchHHHHHHHHHHH
Q 021674           59 VFYSFGSLGTVWFTVWLSKAHSSPAEDP--QLRPAEKKLIVS-SCAS-KE---PVK--TIPWGLILSKPPVWALIVSHFC  129 (309)
Q Consensus        59 ~F~i~~~~~~v~~~~~~~~~~~~p~~~~--~~~~~~~~~~~~-~~~~-~~---~~~--~~~~~~l~~~~~~~~~~~~~~~  129 (309)
                      .|++.++++++..+.++...++.|++..  +.+.++++...+ +... ++   ..+  ...+++++|||.++...+..++
T Consensus       262 ~Fli~g~l~~l~~v~l~~~p~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~n~~f~~~~l~~~~  341 (633)
T TIGR00805       262 GFLICGGVALLTSIPFFFFPKALPKEGKRVNVDVHETEKLEKSEDKSRKKNSDITKDFPKIIKRLLCNPIYMLVILAQVI  341 (633)
T ss_pred             HHHHHHHHHHHHHHHHHhCccccCCcccccchhhhhhhcccccccccchhhhhhHHHHHHHHHHHHcCcHHHHHHHHHHH
Confidence            7888888777654433332223332211  111111100000 0000 00   000  1135678999999999888888


Q ss_pred             HHHHHHHHHHhHHHHHHHHhCCCccchhhHhhhhHH-HHHHHHHHHHHHHHHHHHc
Q 021674          130 HNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWL-TMAFSANLGGWIADTLVSK  184 (309)
Q Consensus       130 ~~~~~~~~~~wlp~~l~~~~g~s~~~~g~~~~~~~~-~~~ig~~~~G~l~dr~~~r  184 (309)
                      .....+++.+|+|.|+++.+|+++.+++++..+..+ ++.++.+++|+++||++.+
T Consensus       342 ~~~~~~~~~~~lP~yl~~~~g~s~~~ag~l~~~~~i~~~~vG~~l~G~l~~r~~~~  397 (633)
T TIGR00805       342 DSLAFNGYITFLPKYLENQYGISSAEANFLIGVVNLPAAGLGYLIGGFIMKKFKLN  397 (633)
T ss_pred             HHHHHHHHHHHHHHHHHHHcCCcHHHHHHHhhhhhhhHHHHHHhhhhheeeeeccc
Confidence            888999999999999999999999999999887766 5789999999999999754

Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.

>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]

Probab=99.76  E-value=1.8e-18  Score=155.40  Aligned_cols=271  Identities=15%  Similarity=0.149  Sum_probs=162.6

Q ss_pred             CCcccccchhhHHHHHhccCCCcchhHHHHHHHhhhhhHHHHhhhhHHHHhhhcC-CcchhHhhhhHHHHHHHHHHhhcc
Q 021674            1 MGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFG-WPSVFYSFGSLGTVWFTVWLSKAH   79 (309)
Q Consensus         1 ~Gig~g~~~p~~~~~i~~~~p~~~rg~~~g~~~~~~~~g~~lg~~l~~~l~~~~g-Wr~~F~i~~~~~~v~~~~~~~~~~   79 (309)
                      .|+||+...|.+.++++|.||.++|++.+++++...++|+.+|.+.+..+..+.+ |||.|+..+++++++.++.....+
T Consensus       131 vGiGeAs~~~ia~s~IaD~f~~~~Rs~~~~ify~~ipvGsglG~vvgs~va~~~~~Wr~af~~~avl~vi~~~L~~~f~~  210 (493)
T KOG1330|consen  131 VGIGEASYSPIAPSLIADSFPDDKRSRVLGIFYFAIPVGSGLGYVVGSVVASLTFWWRWAFRGSAVLGVIVGLLVFLFVR  210 (493)
T ss_pred             hccchhhhcccchhHhhhcCcchhhhHHHHHhhhhcccccceeEEeeeeeccCccceEEEEEeehHHHHHHHHHHHhhcc
Confidence            4899999999999999999999999999999999999999999999999988766 999999999999887665554444


Q ss_pred             cCCCCCCCCCHHHHHHHHhccCCCCC-CCCCChhHhhcchHHHHHHHHHHHHHHHHHHHHHhHHHHHHHH---hCCCccc
Q 021674           80 SSPAEDPQLRPAEKKLIVSSCASKEP-VKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQV---LHFNLTE  155 (309)
Q Consensus        80 ~~p~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~wlp~~l~~~---~g~s~~~  155 (309)
                      | |++.    +.|+.. .+.+..++. ..-.+.+.+.|+|......+.+.......-++..|.|.+++..   .|++..+
T Consensus       211 e-P~rg----a~~~~~-~~~~~~~~~ts~~kDl~~l~~~~v~v~~sl~~~a~~fv~Gs~sww~p~~~~~~~~~~~~~~~~  284 (493)
T KOG1330|consen  211 E-PERG----ARDEVD-GENKMVKPFTSVWKDLKVLAKIKVFVLSSLGIIAAQFVIGSLSWWAPAFIYYSYELIGFDHNA  284 (493)
T ss_pred             C-cccc----cccccc-cCCcCCCCccchHHHHHHHHccCceeeehHHHHHHHHhccccchhhhhHHHHHHHHhCCcccc
Confidence            3 3321    111100 000000000 0011234455666655445555554444555667888887644   3445445


Q ss_pred             hhhHhhhhHHHHHHHHHHHHHHHHHHHHcCCChhhHHHH--HHHHhhHHHHHHHHHhhccCchHHH--HHHHHHHHhhhh
Q 021674          156 SGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKI--MQSIGFLGPAFFLTQLSHVDSPAMA--VLCMACSQGTDA  231 (309)
Q Consensus       156 ~g~~~~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~  231 (309)
                      ...+..+...++.+|.+++|.++||+-++..+....+.-  ....+..+.+.++..........+.  ++++..+.....
T Consensus       285 ~~ifg~vt~~~G~lGvl~Ggiisd~~~~~~~~~~~~~~~q~~~~~g~~~s~~~L~~~~~~~~~s~~~~~il~~~g~~~~~  364 (493)
T KOG1330|consen  285 TLIFGGVTCAGGSLGVLFGGIISDKLSRIFPNSGTLRASQLSAALGAPLSIPFLFLFPAFTSSSMIFGLILFLVGETISW  364 (493)
T ss_pred             chhhhhHHHhhchhhheehHHHHHHHHHhcccccchhHHHHHHhhhhhHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHh
Confidence            555556777889999999999999987644432221111  1111111122222211111112121  222222211111


Q ss_pred             hhhcchhhh-hhccCCCchHHHHHHHhHhHhhhhh-HHHhHHHhhccc
Q 021674          232 FSQSGLYSN-HQDIAPRYSGVLLGLSNTAGVLAGV-FGTAATGYILQH  277 (309)
Q Consensus       232 ~~~~~~~~~-~~~~~~~~~g~a~~~~~~~~~lgg~-i~~~~~g~l~~~  277 (309)
                      .+.+..... .+-.+|+.|.++.++--....+.|- -+|+++|.+-|+
T Consensus       365 ~~~a~n~~i~l~vV~p~~Rt~a~a~~~~~~h~fgd~~~p~ivGilsd~  412 (493)
T KOG1330|consen  365 FNWATNNPIFLEVVPPSRRTTAYALDTVFEHIFGDAASPYIVGILSDK  412 (493)
T ss_pred             cccccccceeeEecCcccccHHHHHHHHHHHHhccCCCcceehhHHHH
Confidence            111111111 2335788999999887777766554 556699999987

>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]

Probab=99.76  E-value=2.7e-17  Score=154.71  Aligned_cols=290  Identities=17%  Similarity=0.252  Sum_probs=197.0

Q ss_pred             CcccccchhhHHHHHhccCCCcchhHHHHHHHhhhhhHHHHhhhhHHHHhhhcCCcchhHhhhhHHHHHHHHHHhhcccC
Q 021674            2 GIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVWLSKAHSS   81 (309)
Q Consensus         2 Gig~g~~~p~~~~~i~~~~p~~~rg~~~g~~~~~~~~g~~lg~~l~~~l~~~~gWr~~F~i~~~~~~v~~~~~~~~~~~~   81 (309)
                      |+|.|..+..+..++.+||+ |||+++.|+..++.++|..+=+++..++.+.+|||+.+++.+.+.+-.........|..
T Consensus       146 G~G~~~~~~paiviv~~YF~-kkR~lA~Gia~~GsG~G~~~~~~l~~~l~~~~G~r~~~l~~~~~~l~~~~~~~~~rp~~  224 (509)
T KOG2504|consen  146 GLGLGLIYLPAVVILGTYFE-KKRALATGIAVSGTGVGTVVFPPLLKYLLSKYGWRGALLIFGGISLNVLVAGALLRPLS  224 (509)
T ss_pred             hccchhhhcchhhhhhhHhH-HHHHHHHhhhhccCCcceeeHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcCCCC
Confidence            88999999999999999988 77999999999999999999999999999999999999998876654433333333322


Q ss_pred             CCCCCC-----------------------------CCH----HHHHHHHhccCCC-CCCCCCCh---hHhhcchHHHHHH
Q 021674           82 PAEDPQ-----------------------------LRP----AEKKLIVSSCASK-EPVKTIPW---GLILSKPPVWALI  124 (309)
Q Consensus        82 p~~~~~-----------------------------~~~----~~~~~~~~~~~~~-~~~~~~~~---~~l~~~~~~~~~~  124 (309)
                      ++..+.                             ..+    ++....+.+++.. .+.+....   .+++|+|.++...
T Consensus       225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ll~~~~fl~~~  304 (509)
T KOG2504|consen  225 PPKKPNEEKDLRNSAASVESTPKPVELRISERDSGLKKLSLSNLATLKRGPDKWRNSPLQAFLSMLDLSLLKDPKFLLLA  304 (509)
T ss_pred             cCCCchhhhhhccccccccccccccccccccCCCCCCcccccchhhhhhCCccccccchhhhhhhhhHHHHcCchHHHHH
Confidence            221111                             000    0000000000000 01011111   4688999999988


Q ss_pred             HHHHHHHHHHHHHHHhHHHHHHHHhCCCccchhhHhhhhHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHhhHHHH
Q 021674          125 VSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPA  204 (309)
Q Consensus       125 ~~~~~~~~~~~~~~~wlp~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~~~~~~~~  204 (309)
                      ....+...+++....++|.|.. .+|++..++..+++..++...++.++.|+++||...++..       +..++++...
T Consensus       305 ~~~~~~~~g~~~p~~~l~~~~~-~~g~~~~~aa~l~Siigi~~i~gRi~~G~laD~~~~~~~~-------~~~~~ll~~g  376 (509)
T KOG2504|consen  305 LSNLFAYLGFNVPFVYLPSYAK-SLGLSSNDAAFLLSIIGVSDIIGRIILGLLADKPGIRALV-------LFLLTLLIAG  376 (509)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHh-hcCCChhhhHHHHHHHHHhhhhhhhhhhhhcCccccchHH-------HHHHHHHHHH
Confidence            8888888899999999999998 6899999999999999999999999999999997643221       2222222222


Q ss_pred             HHHHHhhccCch-HHHHHHHHHHHhhhhhhhcchhh-hhhc-cCCCchHHHHHHHhHhHhhhhhHHHhHHHhhccc-CCc
Q 021674          205 FFLTQLSHVDSP-AMAVLCMACSQGTDAFSQSGLYS-NHQD-IAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQH-GSW  280 (309)
Q Consensus       205 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~g~a~~~~~~~~~lgg~i~~~~~g~l~~~-~~~  280 (309)
                      +........++. .....+...++..+.+.  .+.. ...| ...+.-..+.|+......++..++|++.|++.|. ++|
T Consensus       377 l~~~~~p~~~~~~~l~~~~~~fG~~~g~~~--~l~~~i~~~~~g~~~l~~a~Gl~l~~~gi~~l~gpPiag~~~d~tg~Y  454 (509)
T KOG2504|consen  377 LARLFLPFATTYVGLIVFSILFGFCVGSFS--SLTPVILVDLVGLEKLSNAYGLLLLFQGIGALVGPPIAGLLYDITGNY  454 (509)
T ss_pred             HHHHHHHHhccHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHcChhhcchHHHHHHHHhHHHHHcCcccceeeeeccCCe
Confidence            222222222232 22333444444333322  1111 1223 3456678889999999999999999999999998 559


Q ss_pred             hHHHHHHHHHHHHHHHHHHhhc
Q 021674          281 DDVFKVSVGLYLVGTAVWNLFS  302 (309)
Q Consensus       281 ~~~~~~~~~~~~~~~~~~~~~~  302 (309)
                      ...|.....+.+++...+.+..
T Consensus       455 ~~~f~~~g~~~~~s~~~~~~~~  476 (509)
T KOG2504|consen  455 DHAFYFCGLCFLLSAVLLLILR  476 (509)
T ss_pred             eeehhhcChHHHHHHHHHHHhH
Confidence            9888888888887776665554

>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily

Probab=99.75  E-value=2.5e-16  Score=148.72  Aligned_cols=282  Identities=18%  Similarity=0.187  Sum_probs=184.1

Q ss_pred             CcccccchhhHHHHHhccCCCcchhHHHHHHHhhhhhHHHHhhhhHHHHhhhcCCcchhHhhhhHHHHHHHHHHhhcccC
Q 021674            2 GIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVWLSKAHSS   81 (309)
Q Consensus         2 Gig~g~~~p~~~~~i~~~~p~~~rg~~~g~~~~~~~~g~~lg~~l~~~l~~~~gWr~~F~i~~~~~~v~~~~~~~~~~~~   81 (309)
                      |++.+...|+-.+++.+.+|++|..+++++.+...+++-++||.++|.++..+|=.+.|.++++.-++. +..+...+.+
T Consensus       114 g~~~a~~~PA~~A~ip~lV~~~~L~~A~al~s~~~niar~iGPalgG~Lva~~G~~~~f~inalsfl~~-i~~l~~~~~~  192 (524)
T PF05977_consen  114 GIGSAFFNPAWQAIIPELVPKEDLPAANALNSISFNIARIIGPALGGILVAFFGAAAAFLINALSFLIS-ILALLRWKPP  192 (524)
T ss_pred             HHHHHHHHHHHHHHHHHhccHhhHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHcccc
Confidence            566778889999999999999999999999999999999999999999999999899999876533332 2222222221


Q ss_pred             CCCCCCCCHHHHHHHHhccCCCCCCCCCChhHhhcchHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhCCCccchhhHhh
Q 021674           82 PAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCV  161 (309)
Q Consensus        82 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~wlp~~l~~~~g~s~~~~g~~~~  161 (309)
                      +++ ++. +.|+ . .     ++-  +.-++.+.++|.+.......++.+.....+..-+|.+.++.+|.++..-|+++.
T Consensus       193 ~~~-~~~-~~e~-~-~-----~~l--~~G~ryv~~~~~l~~~l~~~~~~~l~~~a~~aLlPl~a~~~l~~~a~~yGll~a  261 (524)
T PF05977_consen  193 PPP-SSL-PRER-F-F-----SAL--REGLRYVRSSPPLRSVLLRSFLFNLFASAVWALLPLFARDVLGGGASGYGLLLA  261 (524)
T ss_pred             ccc-ccc-chhh-h-h-----hhH--HHHHHHHhcchHHHHHHHHHHHHHHhhhHHHHhhhHHHHHHhCCcHHHHHHHHH
Confidence            111 111 1111 0 0     000  112455667777766555555555555556677999999999999999999999


Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHhhHHHHHHHHHhhccCchHHHHHHHH-HHHhhhhhhhcchhhh
Q 021674          162 LPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSPAMAVLCMA-CSQGTDAFSQSGLYSN  240 (309)
Q Consensus       162 ~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~  240 (309)
                      ..++++.+|+++.+++.+|+.+++.        + ..+.+..++....+...++.+.....++ .+++.. .........
T Consensus       262 ~~gvGai~Gal~~~~l~~~~~~~~l--------v-~~~~~~~a~~~~~lal~~~~~~~~~~l~l~G~~~~-~~~~~~~t~  331 (524)
T PF05977_consen  262 AFGVGAILGALLLPRLRRRLSSRRL--------V-LLASLLFALALLLLALSPSFWLALIALFLAGAAWI-IANSSLNTL  331 (524)
T ss_pred             HHHHHHHHHHHHHHHhhcccCcchh--------h-HHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHH-HHHHHHHHH
Confidence            8888888888888887777654321        1 1122222222222333334433333222 222211 222222233


Q ss_pred             hh-ccCCCchHHHHHHHhHhHhhhhhHHHhHHHhhcccCCchHHHHHHHHHHHHHHHHHHhhcCCc
Q 021674          241 HQ-DIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSWDDVFKVSVGLYLVGTAVWNLFSTGE  305 (309)
Q Consensus       241 ~~-~~~~~~~g~a~~~~~~~~~lgg~i~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  305 (309)
                      .+ ..+++.+|.+.++.++..+.+..+|..+.|.+.|+.+....+.+++++.+++.++...+.-++
T Consensus       332 ~Q~~~P~~~~GRv~si~~~~~~g~~~lGsll~G~la~~~g~~~al~~a~~~lll~~~~~~~~~l~~  397 (524)
T PF05977_consen  332 VQLSVPDWVRGRVFSIYQMVFFGGMPLGSLLWGFLADHFGVRTALLIAGAALLLSALIALRFPLRQ  397 (524)
T ss_pred             HHHhCCHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHhcCcc
Confidence            33 345578999999999999999999999999999998787777777766666665555553333

EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].

>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial

Probab=99.72  E-value=2.3e-15  Score=141.67  Aligned_cols=297  Identities=15%  Similarity=0.091  Sum_probs=165.2

Q ss_pred             CCcccccchhhHHHHHhccCCCcc---hhHHHHHHHhhhhhHHHHhhhhHHHHhhhcCCcchhHhhhhHHHHHHHHHH--
Q 021674            1 MGIGEGVAMPAMNNILSKWVPVAE---RSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVWL--   75 (309)
Q Consensus         1 ~Gig~g~~~p~~~~~i~~~~p~~~---rg~~~g~~~~~~~~g~~lg~~l~~~l~~~~gWr~~F~i~~~~~~v~~~~~~--   75 (309)
                      +|+|.|...|+..+++++++|++|   |+++.++.+.+.++|..+|+++++++.+++|||+.|.+.++..++..+.++  
T Consensus       112 ~g~g~g~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~niG~~ig~~l~g~l~~~~g~~~~f~~~~~~~~~~~l~~~~~  191 (475)
T TIGR00924       112 IAVGSGLFKANPSSMVGKLYERGDMPRRDGGFTLFYMSINIGSFISPLLAGVIAENYGYHVGFNLAAVGMVIGLLTFFAG  191 (475)
T ss_pred             HHhccccccCCHHHHHHHhcCCCCcccccceehhHHHHHHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHc
Confidence            378889999999999999998765   899999999999999999999999999999999999986643322211211  


Q ss_pred             hh-cccCCCCCCCCCHHHHHHHH-------------------hcc--------------------CCCCCCCCCChhHhh
Q 021674           76 SK-AHSSPAEDPQLRPAEKKLIV-------------------SSC--------------------ASKEPVKTIPWGLIL  115 (309)
Q Consensus        76 ~~-~~~~p~~~~~~~~~~~~~~~-------------------~~~--------------------~~~~~~~~~~~~~l~  115 (309)
                      ++ .++.|+++++.++++++...                   .+.                    ...++  ..+..+-.
T Consensus       192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~  269 (475)
T TIGR00924       192 RHMLRDIGSVPDPLSGQGKTYGKLLLALLAALALVFFCAWLMHHVVIANILLMTVTLAVIIFFFRLAFKP--RLDAVARN  269 (475)
T ss_pred             ccccccCCCCCCCcchhhhhhHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHhc--cCCHHHHh
Confidence            11 12222221112211111000                   000                    00000  00111111


Q ss_pred             cchHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhCCCccc----hhhHhhhhHHHHHHHHHHHHHHHHHHHHcCCChhhH
Q 021674          116 SKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTE----SGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTV  191 (309)
Q Consensus       116 ~~~~~~~~~~~~~~~~~~~~~~~~wlp~~l~~~~g~s~~~----~g~~~~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~  191 (309)
                      |......+.....+....+....+-+|.|.++..+.+...    .+.+.++..+...+..++..++-.|..||+......
T Consensus       270 ~~~~~l~l~~~~~~~~~~~~Q~~s~l~l~~~~~~~~~~~~~~ip~~~~~~~n~~~iil~~p~~~~~~~~l~~~~~~~~~~  349 (475)
T TIGR00924       270 KMYAYIVLFLEAVVFWVLYAQMPTSLNFFADNNMHHEMLGMSVPVIWFQSLNPFWVVVGSPVLAMIWTRLGRKGKDPTTP  349 (475)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHhccccccceEECHHHHHhhhHHHHHHHHHHHHHHHHHHHhCCCCCCcH
Confidence            1122222233333333333444566788877665554333    678888888888888877777777777653322211


Q ss_pred             HHHHHHHhhHHHHHH--HHHh----h---ccCchHHHHHH-HHHHHhhhhhhhcchhhhh-hccCCCchHHHHHHHhHhH
Q 021674          192 RKIMQSIGFLGPAFF--LTQL----S---HVDSPAMAVLC-MACSQGTDAFSQSGLYSNH-QDIAPRYSGVLLGLSNTAG  260 (309)
Q Consensus       192 ~~~~~~~~~~~~~~~--~~~~----~---~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~-~~~~~~~~g~a~~~~~~~~  260 (309)
                      .|.  .++++...+.  ....    .   ...+.++.+.. ...+.+-. +..+..++.. +..+++.+|...|+.+...
T Consensus       350 ~k~--~~G~~l~~~~~~~~~~~~~~~~~~~~~s~~~~i~~~~~~~~ge~-~~~p~~~~~~~~~aP~~~~g~~~g~~~l~~  426 (475)
T TIGR00924       350 LKF--TLGMLFCGASFLTFAASIWFADAGGLTSPWFMVLIYLFQTLGEL-MISPLGLSWWTKIAPQRLMGQMLGMWFLAQ  426 (475)
T ss_pred             HHH--HHHHHHHHHHHHHHHHHHhhcCCCCccCHHHHHHHHHHHHHHHH-HHhHHHHHHHHHhCCHHHHHHHHHHHHHHH
Confidence            121  1222221111  1111    0   11233333322 22222211 1122222222 3345578999999999988


Q ss_pred             hhhhhHHHhHHHhhcccCCchHHHHHHHHHHHHHHHHHHhhc
Q 021674          261 VLAGVFGTAATGYILQHGSWDDVFKVSVGLYLVGTAVWNLFS  302 (309)
Q Consensus       261 ~lgg~i~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~  302 (309)
                      .+|..+++.+.....+..++...|...+.+.++..++..+..
T Consensus       427 ~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  468 (475)
T TIGR00924       427 AMGSLLGGYLATFGAVPQGVTGVFGKIGLVTLLVGVVMALMV  468 (475)
T ss_pred             HHHHHHHHHHHHHHhcccchhhHHHHHHHHHHHHHHHHHHHH
Confidence            889999988888777776788777776666665555554443

The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.

>PRK10207 dipeptide/tripeptide permease B; Provisional

Probab=99.72  E-value=2.4e-15  Score=141.84  Aligned_cols=297  Identities=17%  Similarity=0.187  Sum_probs=158.0

Q ss_pred             CCcccccchhhHHHHHhccCCCc--chhHHHHHHHhhhhhHHHHhhhhHHHHhhhcCCcchhHhhhhHHHHHHHHHH---
Q 021674            1 MGIGEGVAMPAMNNILSKWVPVA--ERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVWL---   75 (309)
Q Consensus         1 ~Gig~g~~~p~~~~~i~~~~p~~--~rg~~~g~~~~~~~~g~~lg~~l~~~l~~~~gWr~~F~i~~~~~~v~~~~~~---   75 (309)
                      ||+|+|...|...++++|+||++  ||+++.++++.+.++|+.+|+.+++++.+++|||+.|++.++ +++..++.+   
T Consensus       115 ~~ig~g~~~~~~~~li~~~~p~~~~~~~~~~~~~~~~~nig~~~g~~l~g~l~~~~gw~~~F~i~~i-~~~~~~~~~~~~  193 (489)
T PRK10207        115 IAVGNGLFKANPASLLSKCYPPKDPRLDGAFTLFYMSINIGSLISLSLAPVIADKFGYSVTYNLCGA-GLIIALLVYFAC  193 (489)
T ss_pred             HHhccccccCCHHHHHHHhcCCCchhhhcchhHHHHHHHHHHHHHHHHHHHHHHhhChHHHHHHHHH-HHHHHHHHHHHc
Confidence            58899999999999999999877  558899999999999999999999999999999999998543 333222111   


Q ss_pred             hhc-ccCCCCCCCC-CHHHHHHH------------HhccCCC-CCC-----------------CCCChhHhhcchHHHHH
Q 021674           76 SKA-HSSPAEDPQL-RPAEKKLI------------VSSCASK-EPV-----------------KTIPWGLILSKPPVWAL  123 (309)
Q Consensus        76 ~~~-~~~p~~~~~~-~~~~~~~~------------~~~~~~~-~~~-----------------~~~~~~~l~~~~~~~~~  123 (309)
                      ++. ++.++ +|+. +.+.+...            .....++ .+.                 +..+..+++|+|.+...
T Consensus       194 ~~~~~~~~~-~~~~~~~d~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~f~~~~~~~~~~~r~r~~~~~  272 (489)
T PRK10207        194 RGMVKDIGS-EPDHKPMSFSKLLLVLLGSVVMIFVCAWLMHNVEVANLVLIVLSIVVTIIFFREAFKLDKTGRNKMFVAF  272 (489)
T ss_pred             chhhcccCC-CCCccchhhhhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHH
Confidence            111 11110 1110 01100000            0000000 000                 00000134566554433


Q ss_pred             H-HHHHHHHHHHHH-HHHhHHHHHHHHhCCCcc----chhhHhhhhHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHH
Q 021674          124 I-VSHFCHNWGTFI-LLTWMPTYYNQVLHFNLT----ESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQS  197 (309)
Q Consensus       124 ~-~~~~~~~~~~~~-~~~wlp~~l~~~~g~s~~----~~g~~~~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~  197 (309)
                      . .......+..|. ..+-+|.|.++..+.+..    ....+.++..+...+.+++.+++.||+++|+.......+....
T Consensus       273 ~l~~~~~~f~~~~~q~~~~l~l~~~~~~~~~~~G~~i~~~~~~~~n~~~iii~~pl~~~l~~rl~~r~~~~~~~~k~~~G  352 (489)
T PRK10207        273 VLMLEAVVFYILYAQMPTSLNFFAINNVHHEILGFSINPVSFQALNPFWVVVASPILAGIYTHLGSKGKDLSMPMKFTLG  352 (489)
T ss_pred             HHHHHHHHHHHHHHHcccHHHHHHHHhccccccceEECHHHHHhHhHHHHHHHHHHHHHHHHHHhhCCCCCCcHHHHHHH
Confidence            2 222333344333 447788888753333211    2344444555677788889999999999886432222222111


Q ss_pred             HhhHHHHHHH-----HHhhcc---CchHHHHH-HHHHHHhhhhhhhcchhhhhhccCCCchHHHHHHHhHhHhhhhhHHH
Q 021674          198 IGFLGPAFFL-----TQLSHV---DSPAMAVL-CMACSQGTDAFSQSGLYSNHQDIAPRYSGVLLGLSNTAGVLAGVFGT  268 (309)
Q Consensus       198 ~~~~~~~~~~-----~~~~~~---~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~a~~~~~~~~~lgg~i~~  268 (309)
                      ..+....+..     ......   .+.++.+. ....+.+-......+.-......+++.+|.++|+.+...++|+.++.
T Consensus       353 ~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~i~~~~l~g~Ge~~~~~~g~~~~~~~aP~~~~g~~~g~~~l~~~ig~~lg~  432 (489)
T PRK10207        353 MFLCSLGFLTAAAAGMWFADAQGLTSPWFIVLVYLFQSLGELFISALGLAMIAALVPQHLMGFILGMWFLTQAAAFLLGG  432 (489)
T ss_pred             HHHHHHHHHHHHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHH
Confidence            1111111110     011111   12233222 22222222212111122223445667899999999999999999998


Q ss_pred             hHHHhhcc------c----CCchHHHHHHHHHHHHHHHHHH
Q 021674          269 AATGYILQ------H----GSWDDVFKVSVGLYLVGTAVWN  299 (309)
Q Consensus       269 ~~~g~l~~------~----~~~~~~~~~~~~~~~~~~~~~~  299 (309)
                      .+......      .    ..+...|...++..+++.+++.
T Consensus       433 ~l~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~v~~~  473 (489)
T PRK10207        433 YVATFTAVPDNITDPLETLPVYTNVFGKIGLVTLGVAVVMA  473 (489)
T ss_pred             HHHHHhccccccccchhhhhhHHHHHHHHHHHHHHHHHHHH
Confidence            88765521      1    1245566655555544444433

>TIGR00889 2A0110 nucleoside transporter

Probab=99.67  E-value=1.3e-14  Score=134.61  Aligned_cols=249  Identities=9%  Similarity=0.076  Sum_probs=142.3

Q ss_pred             cchhHHHHHHHhhhhhHHHHhhhhHHHHhhhcCCcchhHhhhhHHHHHHHHHHhhcccCCCCCCCCCHHHHHHHHhccCC
Q 021674           23 AERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVWLSKAHSSPAEDPQLRPAEKKLIVSSCAS  102 (309)
Q Consensus        23 ~~rg~~~g~~~~~~~~g~~lg~~l~~~l~~~~gWr~~F~i~~~~~~v~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~  102 (309)
                      ..|.|..|      ++|.++|+.+++.+....+|+. |++.+++.++..++ ....+|+|+.+++.+.+.+         
T Consensus       132 ~~~~r~~G------~lG~~ig~~l~g~l~~~~~~~~-f~~~~~~~~~~~~~-~~~~~e~~~~~~~~~~~~~---------  194 (418)
T TIGR00889       132 FPPIRVMG------TIGFIAAMWAVSLLDIELSNIQ-LYITAGSSALLGVF-ALTLPDIPVAKSTAKMSIK---------  194 (418)
T ss_pred             CCCeeeeh------hHHHHHHHHHHHHhcccchhHH-HHHHHHHHHHHHHH-HhcCCCCCCCccccccCHH---------
Confidence            34555555      3677888888887744444654 55556555543322 3344554322111000000         


Q ss_pred             CCCCCCCChhHhhcchHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhCCCc--------cchhhHhhhhHHHHHHHHHHH
Q 021674          103 KEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNL--------TESGLFCVLPWLTMAFSANLG  174 (309)
Q Consensus       103 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~wlp~~l~~~~g~s~--------~~~g~~~~~~~~~~~ig~~~~  174 (309)
                       +. ...+.++++|+|+++......++..........+.|.|+++ .|.++        .+.+...+...+...++.+..
T Consensus       195 -~~-~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~g~~~~~~~i~~i~~~~~~  271 (418)
T TIGR00889       195 -VM-LGLDAFILFKNKRMAIFFFFSMLLGAPLQITNIFGNGFLHE-FGRNPEFADSFVVKNASIWMSLSQFSEIFFILTI  271 (418)
T ss_pred             -HH-hhhhHHHHhcCCCeeeHHHHHHHHHhHHHHHHHhHHHHHHH-hcccccccchhhhhhHHHHHHHHHHHHHHHHHHH
Confidence             00 01134567899988877767666655555666888999875 46543        566888888888999999999


Q ss_pred             HHHHHHHHHcCCChhhHHHHHHHHhhHHHHHH--HHHhhccCc--hHHHH-HHHHHHHhhhhhhhcchhhhhh-ccCCCc
Q 021674          175 GWIADTLVSKGLSVTTVRKIMQSIGFLGPAFF--LTQLSHVDS--PAMAV-LCMACSQGTDAFSQSGLYSNHQ-DIAPRY  248 (309)
Q Consensus       175 G~l~dr~~~r~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~--~~~~~-~~~~~~~~~~~~~~~~~~~~~~-~~~~~~  248 (309)
                      |+++||+++|+.        +. .+.+...+.  .......+.  ..... .....+.+.+.. ......... ..+++.
T Consensus       272 g~l~dr~g~r~~--------l~-~~~~~~~v~~~l~~~~~~~~~~~~~l~l~~~l~g~~~~~~-~~~~~~~i~~~~p~~~  341 (418)
T TIGR00889       272 PFFLKRFGIKKV--------ML-LSLVAWALRFGFFAYGDPEYFGYALLFLSMIVYGCAFDFF-NISGSVFVEKEVPVHI  341 (418)
T ss_pred             HHHHHHhCcHHH--------HH-HHHHHHHHHHHHHHHcCcchhhHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHCCHHH
Confidence            999999987631        11 112111111  111111111  11111 111122221111 111112222 345578


Q ss_pred             hHHHHHHHh-HhHhhhhhHHHhHHHhhccc------CCchHHHHHHHHHHHHHHHHHHhh
Q 021674          249 SGVLLGLSN-TAGVLAGVFGTAATGYILQH------GSWDDVFKVSVGLYLVGTAVWNLF  301 (309)
Q Consensus       249 ~g~a~~~~~-~~~~lgg~i~~~~~g~l~~~------~~~~~~~~~~~~~~~~~~~~~~~~  301 (309)
                      ++.+.++.+ ....+|+.++|.+.|.+.|+      .+|+..|.+.+++.+++.+.+.++
T Consensus       342 ~g~~~g~~~~~~~~lg~~iGp~l~G~l~~~~g~~~~~~~~~~f~~~~~~~~i~~~l~~~~  401 (418)
T TIGR00889       342 RASAQGLFTLMCNGFGSLLGYILSGVMVEKMFAYGTFDWQTMWLFFAGYIAILAVLFMIF  401 (418)
T ss_pred             HHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhccccCCchHHHHHHHHHHHHHHHHHHHHH
Confidence            999999997 55678999999999999987      258888888777766665555554

This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.

>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]

Probab=99.65  E-value=1.6e-15  Score=133.89  Aligned_cols=275  Identities=17%  Similarity=0.148  Sum_probs=176.9

Q ss_pred             CCcccccchhhHHHHHhccCCCc-chhHHHHHHHhhhhhHHHHhhhhHHHHhhhcCCcchhHhhhhHHHHHHHHHHhhcc
Q 021674            1 MGIGEGVAMPAMNNILSKWVPVA-ERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVWLSKAH   79 (309)
Q Consensus         1 ~Gig~g~~~p~~~~~i~~~~p~~-~rg~~~g~~~~~~~~g~~lg~~l~~~l~~~~gWr~~F~i~~~~~~v~~~~~~~~~~   79 (309)
                      ||+|.+....+..+++++.||++ ||++++|+...+.++|.++||+.||.+-|..|-+..|.+++.+.++-..+-+...+
T Consensus       169 QgvgsA~~~tsglamlAd~f~~d~er~~vmGialgfislG~lvgPpfGGilYe~~Gk~aPFlVL~~v~Lld~~L~l~vi~  248 (464)
T KOG3764|consen  169 QGVGSAFADTSGLAMLADVFPEDNERGSVMGIALGFISLGVLVGPPFGGILYEFAGKSAPFLVLAIVLLLDGALQLLVIE  248 (464)
T ss_pred             hhhhHHHHHhhhHHHHHHHcccchhhhHHHHHHHHHHhccceecCCcccchHhhcCCcCcHHHHHHHHHHHHHHHHheeC
Confidence            89999999999999999999855 57999999999999999999999999999999999999999888765444333222


Q ss_pred             cCCCCCCCCCHHHHHHHHhccCCCCCCCCCChhHhhcchHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhCCCcc-chhh
Q 021674           80 SSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLT-ESGL  158 (309)
Q Consensus        80 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~wlp~~l~~~~g~s~~-~~g~  158 (309)
                        |.+.++               ++..+..++++++++|..+.........+...-.+---+|.+..+... ++. +.|+
T Consensus       249 --p~~~~~---------------~~~~~~~~~~~Ll~dP~I~~~agai~~~n~~lafLePtlslwm~e~m~-~p~w~~G~  310 (464)
T KOG3764|consen  249 --PTEMDP---------------DSTEQGTPMWSLLMDPYILLIAGAITFSNSSLAFLEPTLSLWMLETMF-TPGWEVGL  310 (464)
T ss_pred             --ccccCc---------------cccccCccHHHHHhCchHhhhhcchhhccchHHHhCcccHHHHHHhcc-CCCcceee
Confidence              211110               001113467889999998876655444444443444556677777777 455 9999


Q ss_pred             HhhhhHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHhhHHHHHHHHHhhccCchHHHHH-HHHHHHhhhhhhhcch
Q 021674          159 FCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSPAMAVL-CMACSQGTDAFSQSGL  237 (309)
Q Consensus       159 ~~~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~  237 (309)
                      ...+..+.-.++..+.|.++||++..++..       ...+++....+.......++....++ -...+++.. ...+.+
T Consensus       311 ~fLp~~~~y~ig~~lfg~la~k~~~~~wl~-------~~~gl~~~G~~~~~iP~~~~~~~L~vp~~~l~~~i~-~~dasl  382 (464)
T KOG3764|consen  311 AFLPASLSYAIGTNLFGKLADKYPHLRWLL-------SLGGLATVGVSSGPIPFATSIAQLWVPNFGLGFGIG-LADASL  382 (464)
T ss_pred             eecccccchhccCchHHHHHHhcCchhHHH-------HHHHHHHHHHHhchhHhhhhHHHHhhhhHHHHHHHH-HHHHHH
Confidence            999999999999999999999998543211       11111111111111111112111111 111111111 111111


Q ss_pred             ---hhhhhcc----CCCchHHHHHHHhHhHhhhhhHHHhHHHhhcccCCchHHHHHHHHHHHHHHHHHHhh
Q 021674          238 ---YSNHQDI----APRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSWDDVFKVSVGLYLVGTAVWNLF  301 (309)
Q Consensus       238 ---~~~~~~~----~~~~~g~a~~~~~~~~~lgg~i~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~  301 (309)
                         ....-|.    .-+.-|...++......+|-++||.++|.+.+.-|+.+.....+...++-+-+..+.
T Consensus       383 ~P~l~~lvd~rh~s~~~vYGsVyaIad~a~sla~a~GP~~gg~iv~~iGF~wl~~iig~~n~iyapvl~ll  453 (464)
T KOG3764|consen  383 IPTLGYLVDPRHVSGFNVYGSVYAIADAAFSLAYAIGPTFGGSLVEAIGFEWLMTIIGILNLIYAPVLLLL  453 (464)
T ss_pred             hhhhHHhcchhhccccceeeeHHHHHHHHHHHhhhccccccchheeehhHHHHHHHHHHHHHHHHHHHHHH
Confidence               1111111    112458888899999999999999999999999777766655555555544333333

>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions

Probab=99.63  E-value=2.3e-13  Score=127.36  Aligned_cols=288  Identities=18%  Similarity=0.184  Sum_probs=184.5

Q ss_pred             hhHHHHHhccCCCcch--------------------------hHHHHHHHhhhhhHHHHhhhhHHHHhhhcC--------
Q 021674           10 PAMNNILSKWVPVAER--------------------------SRSLALVYSGMYLGSVTGLAFSPFLIHRFG--------   55 (309)
Q Consensus        10 p~~~~~i~~~~p~~~r--------------------------g~~~g~~~~~~~~g~~lg~~l~~~l~~~~g--------   55 (309)
                      .--.+++.+..+++++                          ++..+.=.+..++|+++...+.-.+....+        
T Consensus       145 vfyna~LP~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vS~~G~a~Gy~G~~v~l~i~l~~~~~~~~~~~~~~~  224 (477)
T PF11700_consen  145 VFYNAYLPDLARPEPRVRAAREPSANGNISDSEYEAVDSLTRGRVSGLGWALGYIGGLVALLISLLLVISPGSTASNTWA  224 (477)
T ss_pred             HHHHHHhHhhcCCChhhhhhhhhhccCCCChhhhhhHHHhhhchhHHHHHHHHHHHHHHHHHHHHHHHHcCCCccccchh
Confidence            3445677888888877                          999999999999999888777655543322        


Q ss_pred             CcchhHhhhhHHHHHHHHHHhhcccCCCCCCCCCHHHHHHHHhccCCCCCCCCCChhHhhcchHHHHHHHHHHHHHHHHH
Q 021674           56 WPSVFYSFGSLGTVWFTVWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTF  135 (309)
Q Consensus        56 Wr~~F~i~~~~~~v~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~  135 (309)
                      =|..+.+.++--+++.+.+++..||+|+.++. ++.++ .....-  ++.  ...++++.|+|.+....+.+++.+-+..
T Consensus       225 ~r~~~~~~a~ww~vfsiP~~~~~~~~~~~~~~-~~~~~-~~~~g~--~~l--~~t~k~~~~~~~~~~fLia~~l~~dg~~  298 (477)
T PF11700_consen  225 IRVAFLIVALWWLVFSIPLFLWLPDRPGPRPL-PSGSS-YLRFGF--KRL--WRTFKEIRKLRQLFLFLIAYFLYSDGVN  298 (477)
T ss_pred             hhHHHHHHHHHHHHHHHHHHHhCCCCCCCCCC-Ccchh-HHHHHH--HHH--HHHHHHHHhChHHHHHHHHHHHHHHHHH
Confidence            36666665655444444455555665541111 11110 000000  000  1124566677888887888888888899


Q ss_pred             HHHHhHHHHHHHHhCCCccchhhHhhhhHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHhhHHHHHHHHHhh----
Q 021674          136 ILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLS----  211 (309)
Q Consensus       136 ~~~~wlp~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~----  211 (309)
                      .+......|.++++|+|..+...+.....+.+.+|+.+.|++.||+|.|++..     .+..............++    
T Consensus       299 ti~~~~~i~a~~~lg~s~~~l~~~~l~~~i~a~~Ga~~~g~l~~r~g~k~~~~-----l~~~l~~~~~i~~~g~~G~~~~  373 (477)
T PF11700_consen  299 TIISFAGIYATEVLGMSTTQLIVFGLVVQIVAIIGALLFGWLQDRFGPKTKRT-----LLISLILWIIIPLYGLFGFWPS  373 (477)
T ss_pred             HHHHHHHHHHHHhcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHH-----HHHHHHHHHHHHHHHHHHhhhc
Confidence            99999999999999999999999999999999999999999999999773211     111111110111111110    


Q ss_pred             --ccCchHH-HHHHHHHHHhhhhhhhcchhhhhhc-cCCCchHHHHHHHhHhHhhhhhHHHhHHHhhccc-CCchHHHHH
Q 021674          212 --HVDSPAM-AVLCMACSQGTDAFSQSGLYSNHQD-IAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQH-GSWDDVFKV  286 (309)
Q Consensus       212 --~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~g~a~~~~~~~~~lgg~i~~~~~g~l~~~-~~~~~~~~~  286 (309)
                        ..++++. .++....+...+.. ++..-+...+ .|+++.+.-.|+.+..++..+.+||.+.|.+.|. ++.+..+..
T Consensus       374 ~~g~~~~~~f~~~a~~~G~~~G~~-qs~sRs~~~~LiP~g~e~efFgly~i~gk~ss~lGPll~g~i~~~tg~~r~g~~~  452 (477)
T PF11700_consen  374 FFGLKSPWEFWVLAVLIGLFMGGI-QSASRSLFSRLIPPGREAEFFGLYAITGKASSWLGPLLFGLITDATGSQRYGFLF  452 (477)
T ss_pred             ccCcccHHHHHHHHHHHHHHhhhH-HHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHH
Confidence              0122222 22222222222221 1111111223 4566789999999999999999999999999998 568888888


Q ss_pred             HHHHHHHHHHHHHhhcCCccccC
Q 021674          287 SVGLYLVGTAVWNLFSTGEKVVD  309 (309)
Q Consensus       287 ~~~~~~~~~~~~~~~~~~~~~~~  309 (309)
                      ..++.+++.++......+|+.+|
T Consensus       453 l~~lf~~gl~ll~~v~~~~g~~~  475 (477)
T PF11700_consen  453 LLVLFLIGLILLFFVDVEKGRED  475 (477)
T ss_pred             HHHHHHHHHHHHhhccchhhhhc
Confidence            88888888888877777777665

Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.

>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]

Probab=99.61  E-value=1.7e-13  Score=121.79  Aligned_cols=274  Identities=13%  Similarity=0.129  Sum_probs=175.4

Q ss_pred             CcccccchhhHHHHHhccCCCcchhHHHHHHHhhhhhHHHHhhhhHHHHhhh-------------------cCCcchhHh
Q 021674            2 GIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHR-------------------FGWPSVFYS   62 (309)
Q Consensus         2 Gig~g~~~p~~~~~i~~~~p~~~rg~~~g~~~~~~~~g~~lg~~l~~~l~~~-------------------~gWr~~F~i   62 (309)
                      |.|.|..-.++..+++...|+++-.+.+.+....+++|++++|++++.++.+                   -.||++|.+
T Consensus       115 a~Gi~~LetaaNp~v~~lg~~~~a~~rlnl~q~fn~lGa~~gp~~g~~lils~~~~~~~~~~~~~~~~~~~~~v~~pYl~  194 (422)
T COG0738         115 ASGIGLLETAANPYVTLLGKPESAAFRLNLAQAFNGLGAILGPLLGSSLILSGVALTMSAAQILAIKGADASSVQFPYLI  194 (422)
T ss_pred             HhhhHHHHhccchHHHHhCCchhHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhhhhccCHHHHHHHHHHHHHhhhhHHHH
Confidence            4567777788899999999999999999999999999999999999998872                   258888887


Q ss_pred             hhhHHHHHHHH-HHhhcccCCCCCCCCCHHHHHHHHhccCCCCCCCCCChhHhhcchHHHHHHHHHHHHHHHHHHHHHhH
Q 021674           63 FGSLGTVWFTV-WLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWM  141 (309)
Q Consensus        63 ~~~~~~v~~~~-~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~wl  141 (309)
                      .+..-++..+. .+.+.|+.++++++              +.++ ++....+++|+|..+...+..|+..-.--+..+|+
T Consensus       195 ~~~~lvll~v~~~~~k~p~~~~~~~~--------------~~~~-~~~~~~~l~~~~~~~~gvl~~FlYVG~Eva~gsfl  259 (422)
T COG0738         195 LAGLLVLLAVLILLSKLPDLQVAAPS--------------LGAS-GSAGLSSLFQNKHLRLGVLAIFLYVGAEVAIGSFL  259 (422)
T ss_pred             HHHHHHHHHHHHHhccCCcCCccccc--------------cccc-ccchHHHHHhChHHHHHHHHHHHHHhHHHHHHHHH
Confidence            65544333222 22222222111111              0011 01134678999999888888887766678888999


Q ss_pred             HHHHHHHhCCCccchhhHhhhhHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHhhHHHHHHHHHhhccCchHHHHH
Q 021674          142 PTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSPAMAVL  221 (309)
Q Consensus       142 p~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  221 (309)
                      |+|+.+.+|++..++...++....+..+|..++.++..|+...        |.+...+.+...++.. ....++......
T Consensus       260 ~~y~~~~~g~~~~~aa~~~s~~~~~~~vGRFig~~lm~~~~~~--------k~Laf~a~~~ill~~~-~~l~~g~v~~~~  330 (422)
T COG0738         260 VSYLEELLGLNEQQAAYYLSFFWVGFMVGRFIGSALMSRIKPE--------KYLAFYALIAILLLLA-VALIGGVVALYA  330 (422)
T ss_pred             HHHHHhcCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHH--------HHHHHHHHHHHHHHHH-HHHhcChHHHHH
Confidence            9999998999999999999999999999999999999888653        2232222222222211 122233222222


Q ss_pred             HHHHHHhhhhhhhcchhhhhhccCCCchHHHHHHHhHhHhhhhhHHHhHHHhhcccCCchHHHH-HHHHHHHHHHHHHHh
Q 021674          222 CMACSQGTDAFSQSGLYSNHQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSWDDVFK-VSVGLYLVGTAVWNL  300 (309)
Q Consensus       222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~a~~~~~~~~~lgg~i~~~~~g~l~~~~~~~~~~~-~~~~~~~~~~~~~~~  300 (309)
                      ..+++...+ ...+..++...+.-+++...++++ -....+||++-|++.|++.|+.+....+. +...|++.. +.+.+
T Consensus       331 l~~ig~F~s-imfPTIfslal~~l~~~ts~~s~~-l~maivGGAiiP~l~G~i~d~~g~~~~~~~~pllc~lyV-~~~~~  407 (422)
T COG0738         331 LFLIGLFNS-IMFPTIFSLALKNLGEHTSVGSGL-LVMAIVGGAIIPPLQGVIADMFGIQLTFLIVPLLCYLYV-LFFAL  407 (422)
T ss_pred             HHHHHHHhH-HHHHHHHHHHHhccCcccccccee-eeeheecchHHHHHHHHHHHhhhhHHHHHHHHHHHHHHH-HHHHH
Confidence            233332211 122333333232333444444443 33467899999999999999965554444 445555433 55556


Q ss_pred             hc
Q 021674          301 FS  302 (309)
Q Consensus       301 ~~  302 (309)
                      +.
T Consensus       408 ~~  409 (422)
T COG0738         408 IG  409 (422)
T ss_pred             Hh
Confidence            65

>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]

Probab=99.61  E-value=1.3e-13  Score=127.68  Aligned_cols=186  Identities=16%  Similarity=0.149  Sum_probs=129.0

Q ss_pred             CcccccchhhHHHHHhccCCCcchhHHHHHHHhhhhhHHHHhhhhHH--HHhhhcCCcchhHhhhhHHHHHHHHHHhhcc
Q 021674            2 GIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSP--FLIHRFGWPSVFYSFGSLGTVWFTVWLSKAH   79 (309)
Q Consensus         2 Gig~g~~~p~~~~~i~~~~p~~~rg~~~g~~~~~~~~g~~lg~~l~~--~l~~~~gWr~~F~i~~~~~~v~~~~~~~~~~   79 (309)
                      |+..|.......-++.|-.|++.||....+...+..+|..++..++.  .+.+.-.|++.+....+++++.. +.+...|
T Consensus       127 Gl~~gl~~~~~pmyl~E~sP~~~RG~~g~~~~~~~~~g~ll~~~~~l~~ilGt~~~W~~l~~~~~i~~~~~l-~~l~~~P  205 (485)
T KOG0569|consen  127 GLACGLSTGLVPMYLTEISPKNLRGALGTLLQIGVVIGILLGQVLGLPSLLGTEDLWPYLLAFPLIPALLQL-ALLPFLP  205 (485)
T ss_pred             HHHhHHHHHHHHHHHhhcChhhhccHHHHHHHHHHHHHHHHHHHHccHHhcCCCcchHHHHHHHHHHHHHHH-HHHhcCC
Confidence            66777788888889999999999999999999999999999976653  34456679999998888777654 4455679


Q ss_pred             cCCCCC--CCCCHHHHHHH-----------------Hhc--cCCCCCCCCCChhHhhcchHHHHHHHH----HHHH-HHH
Q 021674           80 SSPAED--PQLRPAEKKLI-----------------VSS--CASKEPVKTIPWGLILSKPPVWALIVS----HFCH-NWG  133 (309)
Q Consensus        80 ~~p~~~--~~~~~~~~~~~-----------------~~~--~~~~~~~~~~~~~~l~~~~~~~~~~~~----~~~~-~~~  133 (309)
                      |+|+..  .+.+++|.+..                 .++  ..+.++.++.++++++|||..+.-...    .++. ..+
T Consensus       206 ESPk~Ll~~k~~~~~A~~sl~~y~G~~~~~~~~e~~~~e~~~~~~~~~~~~sl~~~~~~~~lR~~~~i~~~v~~~qq~sG  285 (485)
T KOG0569|consen  206 ESPKYLLIKKGDEEEARKALKFYRGKEDVEAEIEEMLREIEEEELEKKKQISLRQLLKNPTLRRPLLIGIVVSFAQQFSG  285 (485)
T ss_pred             CCcchHHHHcCCHHHHHHHHHHHhCCCcchhHHHHHHHHHHHhccccccCCcHHHHhcCcchhHHHHHHHHHHHHHHhcC
Confidence            999731  11122211100                 000  011112245678899998876653222    2222 223


Q ss_pred             HHHHHHhHHHHHHHHhCCCccchhhHhhhhHHHHHHHHHHHHHHHHHHHHcCCChh
Q 021674          134 TFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVT  189 (309)
Q Consensus       134 ~~~~~~wlp~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~G~l~dr~~~r~~~~~  189 (309)
                      .+....|...++++ -|++..++-......++...+.++++.++.||.|||++.+.
T Consensus       286 i~ai~~Yst~i~~~-aG~~~~~a~~an~~~g~v~~~~t~~~~~lid~~gRRpLll~  340 (485)
T KOG0569|consen  286 INAIFFYSTSIFKT-AGFTPEEAQYANLGIGIVNLLSTLVSPFLIDRLGRRPLLLI  340 (485)
T ss_pred             cceeHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHH
Confidence            44555666556654 69999999999999999999999999999999998865544

>PF13347 MFS_2: MFS/sugar transport protein

Probab=99.55  E-value=7.1e-13  Score=123.26  Aligned_cols=248  Identities=17%  Similarity=0.231  Sum_probs=156.4

Q ss_pred             hhHHHHHhccCC-CcchhHHHHHHHhhhhhHHHHhhhhHHHHhhhc-------CCcchhHhhhhHHHHHHHHHHhhcccC
Q 021674           10 PAMNNILSKWVP-VAERSRSLALVYSGMYLGSVTGLAFSPFLIHRF-------GWPSVFYSFGSLGTVWFTVWLSKAHSS   81 (309)
Q Consensus        10 p~~~~~i~~~~p-~~~rg~~~g~~~~~~~~g~~lg~~l~~~l~~~~-------gWr~~F~i~~~~~~v~~~~~~~~~~~~   81 (309)
                      ..-.++..|..+ ++||.+..+.-.....+|..+...+.+.+.+.+       +||+...+.+++.++...+.....+|+
T Consensus       122 i~~~al~~~lt~~~~~R~~l~~~~~~~~~~g~~l~~~~~~~l~~~~g~~~~~~~~~~~~~v~~iv~~v~~~i~~~~~ke~  201 (428)
T PF13347_consen  122 IPYNALIPELTPDPDERTRLSSWRMIFSMIGSLLASFLAPILVSWFGGGDTSNGYRWMALVLAIVGLVFFLITFFFVKER  201 (428)
T ss_pred             CchhhcCccccccHhhhhhHHHHHHHHHHHHHHHHHHHhhhhhhhhccCccchHHHHHHHHHHHHHHHHhhhhhheeeec
Confidence            344567888886 689999999999999999976666666555432       599999988887776655555455551


Q ss_pred             CCCCCCCCHHHHHHHHhccCCCCCCCCCChhHhhcchHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhCCCccchhhHhh
Q 021674           82 PAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCV  161 (309)
Q Consensus        82 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~wlp~~l~~~~g~s~~~~g~~~~  161 (309)
                      +++.   ++++         ++.+ -...++.++|||+++.+....++...+.....+..+.|.+...|.+ ...+.+..
T Consensus       202 ~~~~---~~~~---------~~~~-~~~~~~~~~~nr~~~~l~~~~~~~~~~~~~~~~~~~y~~~~vl~~~-~~~~~~~~  267 (428)
T PF13347_consen  202 SVEV---TEQE---------KKIS-LRDSLRSLFRNRPFRILLLAFFLQWLAFALMNTFLPYYFTYVLGNE-GLISIFML  267 (428)
T ss_pred             cccc---cccc---------cccc-cccchhhhcccchHHHHHHHHHHHHhhhhhhhhHHHHHHHHHhcCc-hhhHHHHH
Confidence            1111   0000         0101 1224678899999998888888877777777778888888888887 45566666


Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHhhHHHHHHHHHhhccCchHHH-HHHHHHHHhhhhhh--hcchh
Q 021674          162 LPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSPAMA-VLCMACSQGTDAFS--QSGLY  238 (309)
Q Consensus       162 ~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~--~~~~~  238 (309)
                      ...++..++.++.++++||+|+|+.....      ....+........... ++.... +.....+.+.+...  ...+.
T Consensus       268 ~~~~~~~v~~~~~~~l~~r~gk~~~~~~~------~~~~~~~~~~~~~~~~-~~~~~~~i~~~l~gi~~~~~~~~~~a~~  340 (428)
T PF13347_consen  268 IFFVASIVGSPLWGRLSKRFGKKKVYIIG------LLLAALGFLLLFFLGP-GSPWLVLILFILAGIGYGAFFVIPWAML  340 (428)
T ss_pred             HHHHHHHHHHHHHHHHHHHccceeehhhh------HHHHHHHHHHHHHHHh-hhHHHHHHHHHHhHhhhccccccccccc
Confidence            77889999999999999999987533211      0111111111111111 233322 22222333322221  11122


Q ss_pred             hhhhc-----cCCCchHHHHHHHhHhHhhhhhHHHhHHHhhcccC
Q 021674          239 SNHQD-----IAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQHG  278 (309)
Q Consensus       239 ~~~~~-----~~~~~~g~a~~~~~~~~~lgg~i~~~~~g~l~~~~  278 (309)
                      +...|     ...+..|.-.++.+....++..+++.+.|.+++..
T Consensus       341 ad~id~~e~~tg~r~~g~~~s~~~~~~k~~~~la~~i~g~~l~~~  385 (428)
T PF13347_consen  341 ADVIDYDEWKTGRRREGMYFSVNSFFIKIGQGLAGAIVGLLLALV  385 (428)
T ss_pred             ccchhhHHHhcCCCchHHHHHhhhhhhHHHHHHHHHHHHHHHHHh
Confidence            22111     12345799999999999999999999999998763

>PRK09669 putative symporter YagG; Provisional

Probab=99.55  E-value=7.8e-13  Score=123.58  Aligned_cols=247  Identities=14%  Similarity=0.116  Sum_probs=134.5

Q ss_pred             hHHHHHhccC-CCcchhHHHHHHHhhhhhHHHHhhhhHHHHhh-------hcCCcchhHhhhhHHHHHHHHHHhhcccCC
Q 021674           11 AMNNILSKWV-PVAERSRSLALVYSGMYLGSVTGLAFSPFLIH-------RFGWPSVFYSFGSLGTVWFTVWLSKAHSSP   82 (309)
Q Consensus        11 ~~~~~i~~~~-p~~~rg~~~g~~~~~~~~g~~lg~~l~~~l~~-------~~gWr~~F~i~~~~~~v~~~~~~~~~~~~p   82 (309)
                      .-.++.+|+. +++||.+..++-....++|..+++.+...+..       ..|||..+.+.+++.++.....+...+|++
T Consensus       129 p~~al~~~~t~~~~eR~~l~~~r~~~~~~G~~i~~~~~~pl~~~~~~~~~~~g~~~~~~i~~ii~~v~~~~~~~~~~e~~  208 (444)
T PRK09669        129 PYCAMPGAITNDPRERHSLQSWRFALSFIGGLIVSVIALPLVDILGKGDEQKGYFYAMMVMGLLGVVLFFCCFFMTKERY  208 (444)
T ss_pred             hHHHhHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHHHHHHHHHHHHhCCeEEec
Confidence            3446788888 67999999888888888887777655444333       347888888888777665433333334322


Q ss_pred             CCCCCCCHHHHHHHHhccCCCCCCCCCChhHhhcchHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhCCCccchhhHhhh
Q 021674           83 AEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVL  162 (309)
Q Consensus        83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~wlp~~l~~~~g~s~~~~g~~~~~  162 (309)
                      +.+ +    +         ++ +....++++++|||+++.+....++...+...... +..|+.+..--+....+.+...
T Consensus       209 ~~~-~----~---------~~-~~~~~~~~~~~~n~~~~~l~~~~~~~~~~~~~~~~-~~~y~~~~~~~~~~~~~~~~~~  272 (444)
T PRK09669        209 TPE-V----D---------NS-SSVWKDLKLLLGNSQWRIMFIFNVVLLTAVVTRGG-ATLYYVNYVLLRPDLATLFLVT  272 (444)
T ss_pred             CCC-C----c---------CC-CCHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHhh-hhheeeeeecCCHHHHHHHHHH
Confidence            110 0    0         00 00012356788999988877666655444433333 3344433211122233444445


Q ss_pred             hHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHhhHHHHHHHHHhhccCchHHH-HHHHHHHHhhhhhh--hcchhh
Q 021674          163 PWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSPAMA-VLCMACSQGTDAFS--QSGLYS  239 (309)
Q Consensus       163 ~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~--~~~~~~  239 (309)
                      ..+...++.++.++++||+++|+....      ............. ....++.... +.....+.+.+...  ...+.+
T Consensus       273 ~~i~~ii~~~~~~~l~~r~gk~~~~~~------~~~~~~~~~~~~~-~~~~~~~~~~~~~~~i~g~~~~~~~~~~~am~a  345 (444)
T PRK09669        273 GMIAGLFGALLSERLLGKFDRVRAFKW------TIVAFVILSALIF-FIPPSNVWLIFALNILFNFIQNLTTPLQWSMFS  345 (444)
T ss_pred             HHHHHHHHHHHHHHHHHHhChHHHHHH------HHHHHHHHHHHHH-HhCcchHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            557778888999999999987632111      0111111111111 1112233222 22222222222111  111222


Q ss_pred             hhhcc-----CCCchHHHHHHHhHhHhhhhhHHHhHHHhhcccCCc
Q 021674          240 NHQDI-----APRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSW  280 (309)
Q Consensus       240 ~~~~~-----~~~~~g~a~~~~~~~~~lgg~i~~~~~g~l~~~~~~  280 (309)
                      ...|.     ..+..|...+..++..++|.++++.+.|.++|..||
T Consensus       346 d~~d~~e~~~G~r~~g~~~s~~~~~~klg~alg~~i~g~ll~~~Gy  391 (444)
T PRK09669        346 DVVDYEEKRSGRRLDGLVFSTNLFAIKLGLAIGGAVVGWILAWVDY  391 (444)
T ss_pred             hhhhhhhhhcCcCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence            11111     123468888999999999999999999999886444

>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]

Probab=99.52  E-value=2.7e-12  Score=112.63  Aligned_cols=289  Identities=16%  Similarity=0.157  Sum_probs=159.3

Q ss_pred             CcccccchhhHHHHHhccCCCcchhHHHHHHHhhhhhHHHHhhhhHHHHhhhcCCcchhHhhhhHHHHHHHHHHhhcccC
Q 021674            2 GIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVWLSKAHSS   81 (309)
Q Consensus         2 Gig~g~~~p~~~~~i~~~~p~~~rg~~~g~~~~~~~~g~~lg~~l~~~l~~~~gWr~~F~i~~~~~~v~~~~~~~~~~~~   81 (309)
                      |+|.|+ .|...++-.|.-|..+|++-+-.. .-+.+|.++...+.-..++.+||||..+..+.+-.+ +..++...+|+
T Consensus       177 ~~g~gg-~pv~~~~yle~lp~~~r~~~~V~~-~~waig~v~ea~law~vm~~~gwr~~l~~~~~pl~~-~a~f~~w~~ES  253 (528)
T KOG0253|consen  177 GFGVGG-LPVDSAIYLEFLPSSHRWLLTVMS-FFWAIGQVFEALLAWGVMSNFGWRYLLFTSSTPLMF-AARFLVWVYES  253 (528)
T ss_pred             hccCCC-ccHhHHHHHHhccCcCCCcchhHH-HHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHhHHHH-HHHHHhhcccC
Confidence            677888 899889999999999999877777 888999999999988889999999998876644333 33444456888


Q ss_pred             CCCCCCCCHHHHH------HHH---------------------hc--------cCCCCCCCCCChhHhhcc---hHHHHH
Q 021674           82 PAEDPQLRPAEKK------LIV---------------------SS--------CASKEPVKTIPWGLILSK---PPVWAL  123 (309)
Q Consensus        82 p~~~~~~~~~~~~------~~~---------------------~~--------~~~~~~~~~~~~~~l~~~---~~~~~~  123 (309)
                      |+-+-....+++.      ..+                     ++        +..+++  ....+.++..   ++...+
T Consensus       254 pRf~~~~G~~~kAletL~kiArmNg~qlplgvl~~s~~~~~e~e~~~~~~~~~~a~ke~--rg~~~nLlsp~lrkttlll  331 (528)
T KOG0253|consen  254 PRFYLAKGDDYKALETLHKIARMNGKQLPLGVLESSAIDRQEQEESDLDDSKSSAAKEV--RGGTTNLLSPKLRKTTLLL  331 (528)
T ss_pred             cchhhhcCChHHHHHHHHHHHHhcCCCCCcceeeeehhhhhhhhhhchhhhhhcccccc--ccchHhhcChHHHHHHHHH
Confidence            8742111111110      000                     00        000111  1122333321   122234


Q ss_pred             HHHHHHHHHHHHHHHHhHHHHHHHH-----------------hCCCcc-chhhH-hhhhHHHHHHHHHHHHHHHHHHHHc
Q 021674          124 IVSHFCHNWGTFILLTWMPTYYNQV-----------------LHFNLT-ESGLF-CVLPWLTMAFSANLGGWIADTLVSK  184 (309)
Q Consensus       124 ~~~~~~~~~~~~~~~~wlp~~l~~~-----------------~g~s~~-~~g~~-~~~~~~~~~ig~~~~G~l~dr~~~r  184 (309)
                      +...|...+.+|+.........|..                 ..-... +..+. .....+.-.-|.++.+++.||+|||
T Consensus       332 w~iwfgnafsyyg~VLlttelfqsgd~c~~~~r~~p~e~e~~~~c~~s~~~dYrdllitslaefPGlLIt~~iverlGRK  411 (528)
T KOG0253|consen  332 WRIWFGNAFSYYGSVLLTTELFQSGDACPLYNRFLPTELETRANCPLSVAKDYRDLLITSLAEFPGLLITGVIVERLGRK  411 (528)
T ss_pred             HHHHHhhHHHHHHHHHHHHHHHhccCccccchhcchhHHHhhhcCCccchhHHHHHHHHHHhhCCchhHHHHHHHHhcch
Confidence            4444545556677665554444421                 111111 11222 2334567778889999999999987


Q ss_pred             CCChhhHHHHHHHHhhHHHHHHHHHhhccCchHHHHHHHHH--HHhhhhhhhcchhhhhhccCC-CchHHHHHHHhHhHh
Q 021674          185 GLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSPAMAVLCMAC--SQGTDAFSQSGLYSNHQDIAP-RYSGVLLGLSNTAGV  261 (309)
Q Consensus       185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~-~~~g~a~~~~~~~~~  261 (309)
                      +        .+. ..++...++........++.....+++.  .+..+++  ...|.+.+|..| +.|+++.|..+...+
T Consensus       412 k--------TMa-l~l~~f~iflfll~~c~~rn~~tvllf~arafisg~f--qvaYvYtPEVyPTavRatgvGtcSsmaR  480 (528)
T KOG0253|consen  412 K--------TMA-LSLILFGIFLFLLTTCKTRNAYTVLLFTARAFISGAF--QVAYVYTPEVYPTAVRATGVGTCSSMAR  480 (528)
T ss_pred             h--------HHH-HHHHHHHHHHHHHHHhcCcchhHHHHHHHHHHHhchh--eEEEEecCcccchhhhhcchhhhhhHHh
Confidence            4        111 1111112221111111122222222222  2222223  334555567777 479999999999999


Q ss_pred             hhhhHHHhHHHhhcccCCchHHHHHHHHHHHHHHHHHHh-hcCCccc
Q 021674          262 LAGVFGTAATGYILQHGSWDDVFKVSVGLYLVGTAVWNL-FSTGEKV  307 (309)
Q Consensus       262 lgg~i~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~  307 (309)
                      +|++++|.+. ...+.......+...+.+.+.+.....+ +.||.++
T Consensus       481 IggI~~p~iA-~~~e~s~sl~i~vy~~~~ilagIavcffPiEtkGR~  526 (528)
T KOG0253|consen  481 IGGIFSPVIA-MRAELSTSLPIFVYGALFILAGIAVCFFPIETKGRS  526 (528)
T ss_pred             hhhhhhhHHH-HHhccceeehHHHHHHHHHHHHHHheeeeeccCCCC
Confidence            9999999887 4444444555555555444444333333 3555544

>PRK09848 glucuronide transporter; Provisional

Probab=99.52  E-value=9.5e-13  Score=123.12  Aligned_cols=162  Identities=17%  Similarity=0.124  Sum_probs=99.1

Q ss_pred             hhHhhcchHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhCCCccchhhHhhhhHHHHHHHHHHHHHHHHHHHHcCCChhh
Q 021674          111 WGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTT  190 (309)
Q Consensus       111 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~wlp~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~  190 (309)
                      +++++|||+++...+..++...+.+...++.|.|+++.+|.+....++......++..++.++.++++||+++|+..   
T Consensus       221 ~~~l~~n~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~l~~r~g~~~~~---  297 (448)
T PRK09848        221 LQTLKRNRPLFMLCIGALCVLISTFAVSASSLFYVRYVLNDTGLFTVLVLVQNLVGTVASAPLVPGMVARIGKKNTF---  297 (448)
T ss_pred             HHHHhCCchHHHHHHHHHHHHHHHHHHhhhheeeEeeecCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHH---
Confidence            56789999998888887877777788888888899988898776666655555677888999999999999866311   


Q ss_pred             HHHHHHHHhhHHHHHHHHHhhccCchHHHHH-HHHHHHhhhhhhhcchhhhhhcc--------CCCchHHHHHHHhHhHh
Q 021674          191 VRKIMQSIGFLGPAFFLTQLSHVDSPAMAVL-CMACSQGTDAFSQSGLYSNHQDI--------APRYSGVLLGLSNTAGV  261 (309)
Q Consensus       191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~g~a~~~~~~~~~  261 (309)
                          .....+.............++.+.... ....+.+.+.. .....+...|.        ..+..|...++.|+...
T Consensus       298 ----~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~l~g~G~~~~-~~~~~al~~~~~~~~~~~~g~r~~G~~~~~~~~~~k  372 (448)
T PRK09848        298 ----LIGALLGTCGYLLFFWVSVWSLPVALVALAIASIGQGVT-MTVMWALEADTVEYGEYLTGVRIEGLTYSLFSFTRK  372 (448)
T ss_pred             ----HHHHHHHHHHHHHHHHcCchhHHHHHHHHHHHHHHHHHH-HHHHHHHHHHhhhhhHHhhCccchhHHHHHHHHHHH
Confidence                111111111111111111112222211 22222222211 11111111111        12356999999999999


Q ss_pred             hhhhHHHhHHHhhcccCCc
Q 021674          262 LAGVFGTAATGYILQHGSW  280 (309)
Q Consensus       262 lgg~i~~~~~g~l~~~~~~  280 (309)
                      +|+++++.+.|.+++..||
T Consensus       373 lg~aig~~i~g~~l~~~G~  391 (448)
T PRK09848        373 CGQAIGGSIPAFILGLSGY  391 (448)
T ss_pred             HHHHHHHHHHHHHHHHcCC
Confidence            9999999999998876433

>PRK10054 putative transporter; Provisional

Probab=99.52  E-value=7.4e-13  Score=121.92  Aligned_cols=171  Identities=13%  Similarity=0.092  Sum_probs=114.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhCCCccchhhHhhhhHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHH
Q 021674          119 PVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSI  198 (309)
Q Consensus       119 ~~~~~~~~~~~~~~~~~~~~~wlp~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~~  198 (309)
                      .++.+....++...+.+....++|.|+++++|+|..+.|+..+...++..++.+..|+++||+++|+...         .
T Consensus         8 ~~~~l~~~~~~~~~g~~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~k~~~~---------~   78 (395)
T PRK10054          8 STSALLASSLLLTIGRGATLPFMTIYLSRQYSLSVDLIGYAMTIALTIGVVFSLGFGILADKFDKKRYML---------L   78 (395)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhHH---------H
Confidence            3566777788888889999999999999999999999999999999999999999999999999874211         1


Q ss_pred             hhHHHHHHHHHhhccCchHHHHHHH-HHHHhhhhhhhcchhhhh-hccCCCchHHHHHHHhHhHhhhhhHHHhHHHhhcc
Q 021674          199 GFLGPAFFLTQLSHVDSPAMAVLCM-ACSQGTDAFSQSGLYSNH-QDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQ  276 (309)
Q Consensus       199 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~-~~~~~~~~g~a~~~~~~~~~lgg~i~~~~~g~l~~  276 (309)
                      +.....+........++.+..+.+. ..+.+...+ .+...... +..++++++.+.++.+...++|+.++|.+.+++.+
T Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~g~~~~~~~lg~~igp~l~~~l~~  157 (395)
T PRK10054         79 AITAFASGFIAIPLVNNVTLVVLFFALINCAYSVF-STVLKAWFADNLSSTSKTKIFSLNYTMLNIGWTVGPPLGTLLVM  157 (395)
T ss_pred             HHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            1111111111111222332222221 111111111 11112222 23456789999999999999999999999999876


Q ss_pred             cCCchHHHHHHHHHHHHHHHHHHh
Q 021674          277 HGSWDDVFKVSVGLYLVGTAVWNL  300 (309)
Q Consensus       277 ~~~~~~~~~~~~~~~~~~~~~~~~  300 (309)
                       .+|+..|...+++.+++.+...+
T Consensus       158 -~g~~~~f~~~~~~~~i~~i~~~~  180 (395)
T PRK10054        158 -QSINLPFWLAAICSAFPLVFIQI  180 (395)
T ss_pred             -hccCcHHHHHHHHHHHHHHHHHH
Confidence             47998998877777666544433

>PRK09584 tppB putative tripeptide transporter permease; Reviewed

Probab=99.49  E-value=6.8e-12  Score=118.93  Aligned_cols=65  Identities=18%  Similarity=0.429  Sum_probs=57.8

Q ss_pred             CCcccccchhhHHHHHhccCCCcc--hhHHHHHHHhhhhhHHHHhhhhHHHHhhhcCCcchhHhhhh
Q 021674            1 MGIGEGVAMPAMNNILSKWVPVAE--RSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGS   65 (309)
Q Consensus         1 ~Gig~g~~~p~~~~~i~~~~p~~~--rg~~~g~~~~~~~~g~~lg~~l~~~l~~~~gWr~~F~i~~~   65 (309)
                      +|+|.|...|...++++|++|+++  |.++.++++.+.++|..+|+.+++++.+++|||+.|.+.++
T Consensus       122 ~gig~g~~~~~~~~l~~~~f~~~~~~~~~~~~~~~~~~~iG~~~gp~i~g~l~~~~g~~~~F~i~~i  188 (500)
T PRK09584        122 IAVGNGLFKANPSSLLSTCYEKDDPRLDGAFTMYYMSINIGSFFSMLATPWLAAKYGWSVAFALSVV  188 (500)
T ss_pred             HHHhhhcccCCHHHHHHHhcCCCchhhhhcchHHHHHHHHHHHHHHHHHHHHHHhhCHHHHHHHHHH
Confidence            477888899999999999998654  56788999999999999999999999999999999998664

>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]

Probab=99.48  E-value=5.3e-12  Score=107.24  Aligned_cols=272  Identities=21%  Similarity=0.229  Sum_probs=164.6

Q ss_pred             CcccccchhhHHHHHhccCCCcchhHHHHHHHhhhhhHHHHhhhhHHHHhhhcCCcchh--HhhhhHHHHH---------
Q 021674            2 GIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVF--YSFGSLGTVW---------   70 (309)
Q Consensus         2 Gig~g~~~p~~~~~i~~~~p~~~rg~~~g~~~~~~~~g~~lg~~l~~~l~~~~gWr~~F--~i~~~~~~v~---------   70 (309)
                      |+|.=..-.+-.+++..||..||.+.++|+..+..-+|+..-..+-+++.+..+  ..|  .-...+++..         
T Consensus       147 GIGgESlAVaQN~yav~wFKGKELn~vfGlqlSvAR~GstvNf~lm~~ly~~~~--~~~~~~ghT~LG~~l~~~~~tc~~  224 (459)
T KOG4686|consen  147 GIGGESLAVAQNKYAVYWFKGKELNFVFGLQLSVARLGSTVNFLLMPFLYDTMG--RMFPGVGHTLLGLWLCFEVKTCKQ  224 (459)
T ss_pred             ccCchhhhhhhcceeEEEecCccccchhhHHHHHHHhhceeeeeecHHHHHHHH--HhcccchHHHHHHHHHHHHHHHHH
Confidence            455555566777899999999999999999999999999877777777766432  011  0011111110         


Q ss_pred             -HHHHH-hhcccCCCCCCCCCHHHHHHHHhccC-CCCCCCCCChhHhh-cchHHHHHHHHHHHHHHHHHHHHHhHHHHHH
Q 021674           71 -FTVWL-SKAHSSPAEDPQLRPAEKKLIVSSCA-SKEPVKTIPWGLIL-SKPPVWALIVSHFCHNWGTFILLTWMPTYYN  146 (309)
Q Consensus        71 -~~~~~-~~~~~~p~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~-~~~~~~~~~~~~~~~~~~~~~~~~wlp~~l~  146 (309)
                       .+..+ .-..|        +.+|+..-+++.. .++|  +  +.++. -.|++|.+..++.+.+...+-+++--|.+++
T Consensus       225 slical~lg~~D--------~rAerilh~e~g~~Ge~p--k--Ltdv~~f~ppfw~~~iicv~yyva~fPFi~lg~~fF~  292 (459)
T KOG4686|consen  225 SLICALSLGLSD--------DRAERILHLEEGFLGEEP--K--LTDVNTFYPPFWVLVIICVLYYVAWFPFITLGPMFFQ  292 (459)
T ss_pred             HHHHHHHhhhhh--------hHHHHHHhhhcCcccCCc--c--cccccccCccHHHHHHHHHHHHHHHHHHhhhhHHHHH
Confidence             00000 00011        1223222122211 1122  1  11222 2478999998888888888889999999999


Q ss_pred             HHhCCCccchhhHhhhhHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHhhHHHHHHHHHhhccCchHHHHHHHHHH
Q 021674          147 QVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSPAMAVLCMACS  226 (309)
Q Consensus       147 ~~~g~s~~~~g~~~~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (309)
                      +.+|+|+.+++-+.+.......+-+++.|.++||+|++-+++..  .   .+..++. =....+ .-.+|+...+++...
T Consensus       293 ~rfGlS~~~a~~i~s~vy~Isav~spvfg~i~Dk~G~n~~wv~~--a---~~~tl~~-H~~l~F-t~lsPy~~m~~lGLs  365 (459)
T KOG4686|consen  293 KRFGLSAVSAGNILSTVYGISAVLSPVFGAISDKYGFNLWWVAS--A---CILTLLG-HSGLFF-TFLSPYTSMTFLGLS  365 (459)
T ss_pred             HhhCCChhhccchhhhhhhhhhhhhhhHHHhHhhhcceehhHHH--H---HHHHHHH-hhhHHh-hhccHHHHHHHHhhh
Confidence            99999999999999999888999999999999999965222111  0   0111110 001111 113455444444332


Q ss_pred             HhhhhhhhcchhhhhhccCC-CchHHHHHHHhHhHhhhhhHHHhHHHhhccc-CCch--HH-HHHHHHHHHHHHHH
Q 021674          227 QGTDAFSQSGLYSNHQDIAP-RYSGVLLGLSNTAGVLAGVFGTAATGYILQH-GSWD--DV-FKVSVGLYLVGTAV  297 (309)
Q Consensus       227 ~~~~~~~~~~~~~~~~~~~~-~~~g~a~~~~~~~~~lgg~i~~~~~g~l~~~-~~~~--~~-~~~~~~~~~~~~~~  297 (309)
                      ....+.   .+++......| ++.|++.|..+.+.|+|-++.|.+.|.+.|+ +++.  -+ |+......+....+
T Consensus       366 ysllAc---slWP~va~~vpE~qLGTaygf~qsIqNLgla~i~Iiag~i~d~~g~y~~le~ffl~~~~~aL~svgi  438 (459)
T KOG4686|consen  366 YSLLAC---SLWPCVASLVPEEQLGTAYGFIQSIQNLGLAFIPIIAGFIADGDGSYDNLEAFFLIIGLMALTSVGI  438 (459)
T ss_pred             HHHHHH---HHhhhhhhhCCHHHhcchHHHHHHHHhhhhhHHhhhhheeecCCCchhhHHHHHHHHHHHHHHHHHH
Confidence            222211   12333333344 5789999999999999999999999999998 4443  23 33344444444433

>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial

Probab=99.47  E-value=2.2e-12  Score=121.47  Aligned_cols=176  Identities=13%  Similarity=0.115  Sum_probs=115.3

Q ss_pred             hcchH-HHHHHHHHHHHHHHHHHHHHhHHHHHHHH--hCCCccchhhHhhhhHHHHHHHHHHHHHHHHH-HHHcCCChhh
Q 021674          115 LSKPP-VWALIVSHFCHNWGTFILLTWMPTYYNQV--LHFNLTESGLFCVLPWLTMAFSANLGGWIADT-LVSKGLSVTT  190 (309)
Q Consensus       115 ~~~~~-~~~~~~~~~~~~~~~~~~~~wlp~~l~~~--~g~s~~~~g~~~~~~~~~~~ig~~~~G~l~dr-~~~r~~~~~~  190 (309)
                      +++|+ ++.+....++...++|+...++|.|+++.  +|+|..+++.......++..++.+++|+++|| +|||+.    
T Consensus         6 ~~~p~~~~~l~~~~~~~~~~~~~~~~~L~~yl~~~~~lg~s~~~ag~~~~~~~~~~~~~~~~~G~laDr~~G~~~~----   81 (475)
T TIGR00924         6 FGHPKPLFTLFFVELWERFSYYGMQGILAVYLVQQAGLGFSQEQAFIIFGAYSALVYLLTSVGWWFGDRVWGTKKT----   81 (475)
T ss_pred             cCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHhhcchHHH----
Confidence            44543 55566667777788999999999999987  89999999999999999999999999999999 787631    


Q ss_pred             HHHHHHHHhhHHHHHHHHHhhccCchHHH-HHHHHHHHhhhhhhhcchhhhhhcc-CC---CchHHHHHHHhHhHhhhhh
Q 021674          191 VRKIMQSIGFLGPAFFLTQLSHVDSPAMA-VLCMACSQGTDAFSQSGLYSNHQDI-AP---RYSGVLLGLSNTAGVLAGV  265 (309)
Q Consensus       191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~-~~---~~~g~a~~~~~~~~~lgg~  265 (309)
                          +. .+.....+........++.... +.....+.+.+.+ .+...+...+. ++   +.++.+.++.+...++|+.
T Consensus        82 ----l~-~~~~~~~~g~~~~~~~~~~~~~~~~~~l~g~g~g~~-~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~niG~~  155 (475)
T TIGR00924        82 ----MV-LGGIVLMLGHFMLAMSIYPDLIFYGLGTIAVGSGLF-KANPSSMVGKLYERGDMPRRDGGFTLFYMSINIGSF  155 (475)
T ss_pred             ----HH-HHHHHHHHHHHHHHhcccHhHHHHHHHHHHhccccc-cCCHHHHHHHhcCCCCcccccceehhHHHHHHHHHH
Confidence                11 1111111111111222222222 2222222222211 11111111111 22   3477888999999999999


Q ss_pred             HHHhHHHhhcccCCchHHHHHHHHHHHHHHHHHHh
Q 021674          266 FGTAATGYILQHGSWDDVFKVSVGLYLVGTAVWNL  300 (309)
Q Consensus       266 i~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~  300 (309)
                      ++|.+.|++.++.+|+..|.+.++..+++.+.+..
T Consensus       156 ig~~l~g~l~~~~g~~~~f~~~~~~~~~~~l~~~~  190 (475)
T TIGR00924       156 ISPLLAGVIAENYGYHVGFNLAAVGMVIGLLTFFA  190 (475)
T ss_pred             HHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999878999998877666555544433

The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.

>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins

Probab=99.47  E-value=1.3e-11  Score=117.22  Aligned_cols=265  Identities=17%  Similarity=0.169  Sum_probs=151.4

Q ss_pred             CcccccchhhHHHHHhccCCCcchhHHHHHHHhhhhhHHHHhhhhHHHHhhhcCCcchhHhhhhHHHHHHHHHHh-hccc
Q 021674            2 GIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVWLS-KAHS   80 (309)
Q Consensus         2 Gig~g~~~p~~~~~i~~~~p~~~rg~~~g~~~~~~~~g~~lg~~l~~~l~~~~gWr~~F~i~~~~~~v~~~~~~~-~~~~   80 (309)
                      |+|.|... .....++|..|.|.|....++.....-.....++.++..+..+-+|||.|++..+...+.++..+. +.|+
T Consensus       142 GvgaG~~~-~~~~~isEl~p~k~R~~~~~~~~~~~i~~~~~~~~ia~~~~~~~~WRw~~~~~~i~~~i~~vl~~~fY~PP  220 (599)
T PF06609_consen  142 GVGAGVQE-LAALAISELVPNKWRGLGLAIASIPFIITTWISPLIAQLFAAHSGWRWIFYIFIIWSGIALVLIFFFYFPP  220 (599)
T ss_pred             HHhhHHHH-HHHHHHHHhcccchhhhHhHHHHHHHHhhhcccHHHHHHhccCCCcchHHHHHHHHHHHHHHHHHHHhCCC
Confidence            55654444 445668999999999988887776655555567777777766789999999877655443322221 2221


Q ss_pred             C-CCCC-CCCCHHHH-HHH--------------------------------------------------HhccC-CCCCC
Q 021674           81 S-PAED-PQLRPAEK-KLI--------------------------------------------------VSSCA-SKEPV  106 (309)
Q Consensus        81 ~-p~~~-~~~~~~~~-~~~--------------------------------------------------~~~~~-~~~~~  106 (309)
                      + ++.+ ++.++.|+ +..                                                  .|... .++| 
T Consensus       221 ~~~~~~~~~~s~~~~l~~lD~IG~~L~~~Gl~LfLlgl~wgG~~~~~W~Sa~VIa~lviG~~~Lv~F~~wE~~~~~~~P-  299 (599)
T PF06609_consen  221 PRAQLHGRKLSKREQLKELDWIGIFLFIAGLALFLLGLSWGGYPYYPWKSAHVIAPLVIGFVLLVAFVVWEWFGAPKDP-  299 (599)
T ss_pred             chhhhccccCcHHHHHHHhhHHHHHHHHHHHHHHHHHHhccCCCCCCCCCccchhhHHHHHHHHHHHHHhhhhccCCCC-
Confidence            1 1111 11111111 000                                                  00000 0111 


Q ss_pred             CCCChhHhhcch-HHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhCCCcc---chhhHhhhhHHHHHHHHHHHHHHHHHHH
Q 021674          107 KTIPWGLILSKP-PVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLT---ESGLFCVLPWLTMAFSANLGGWIADTLV  182 (309)
Q Consensus       107 ~~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~wlp~~l~~~~g~s~~---~~g~~~~~~~~~~~ig~~~~G~l~dr~~  182 (309)
                       -.|. +++|++ .+.......+.....+|+...+.|...+..++-++.   +.+.+..+.+++..++..+.|.+..|.+
T Consensus       300 -l~P~-~Lf~~~r~~~~~lvi~fi~G~~~~s~~~l~p~~~~~vf~~d~~~~~~~~~~s~~~~fg~~~g~~i~g~l~~~ir  377 (599)
T PF06609_consen  300 -LFPH-RLFKDRRGFAALLVISFISGMNFFSVNILWPQQVVNVFGSDPISITEIGWISSPVGFGSCAGAVILGLLFSKIR  377 (599)
T ss_pred             -cCCH-HHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCcccceeehhhhhHHHHHHHHHHHHHHHHHHcc
Confidence             2344 478874 455555666666667888889999999888888764   6788888888888899999999998775


Q ss_pred             HcCCChhhHHHHHHHHhhHHHHHHHHH-hhccCchHHHHH-HHHHHHhhhhhhhcchhhhhhccCCCchHHHHHHHhHhH
Q 021674          183 SKGLSVTTVRKIMQSIGFLGPAFFLTQ-LSHVDSPAMAVL-CMACSQGTDAFSQSGLYSNHQDIAPRYSGVLLGLSNTAG  260 (309)
Q Consensus       183 ~r~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~a~~~~~~~~  260 (309)
                      +-|       ..+........+++... ....++....+. ....+++.+..............+++..|+++++...++
T Consensus       378 ~~K-------w~li~~~~~~ta~~Gama~~~~~n~~~~i~~~~l~g~giG~~~~~~~~~~ql~~p~~~ig~a~gL~~s~R  450 (599)
T PF06609_consen  378 HIK-------WQLIFGSVLMTAFCGAMAAVRPDNKNAAIAFLVLAGFGIGGILVPAIVIAQLIVPDEDIGTATGLTGSIR  450 (599)
T ss_pred             chh-------HHHHHHHHHHHHHHHHHHHccCCCcchHHHHHHHHHHhHHHHHHHHHHeeEeeeCchHHHHHHHHHHHHH
Confidence            321       11111111111111111 122233332222 222233332221111111122345567999999999999


Q ss_pred             hhhhhHHHhHHHhhccc
Q 021674          261 VLAGVFGTAATGYILQH  277 (309)
Q Consensus       261 ~lgg~i~~~~~g~l~~~  277 (309)
                      .+||.++..+...+..+
T Consensus       451 ~~GGsIg~aIy~~I~~n  467 (599)
T PF06609_consen  451 SIGGSIGYAIYNAIFTN  467 (599)
T ss_pred             HHhhHHHHHHHHHHHHh
Confidence            99999999888776653

Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].

>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon

Probab=99.46  E-value=1.1e-11  Score=111.07  Aligned_cols=283  Identities=17%  Similarity=0.204  Sum_probs=178.9

Q ss_pred             CcccccchhhHHHHHhccCCCcchhHHHHHHHhhhhhHHHHhhhhHHHHhhhcCCcchhHh---hhhHHHHHHHHHHhhc
Q 021674            2 GIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYS---FGSLGTVWFTVWLSKA   78 (309)
Q Consensus         2 Gig~g~~~p~~~~~i~~~~p~~~rg~~~g~~~~~~~~g~~lg~~l~~~l~~~~gWr~~F~i---~~~~~~v~~~~~~~~~   78 (309)
                      |+|.+.......++++|..|+|||+++.++..+-.-+|.+++..+.+.+.+.++=.-..-+   .+.+.++..++..+. 
T Consensus       100 G~G~~~s~T~~lALl~D~~~e~~R~~~v~ivw~Mli~G~iv~ai~~g~lL~~~s~~rL~~v~~~~a~i~~~l~~ia~wg-  178 (403)
T PF03209_consen  100 GLGVHASGTSFLALLADLAPEERRPRVVAIVWVMLIVGIIVSAIVFGRLLDPFSPERLIQVIQGVALIALLLNLIALWG-  178 (403)
T ss_pred             HhhHhHhHHHHHHHHHhcCCHhhhhhhHHHHHHHHHHHHHHHHHHHHHHccccCHHHHHHHHHHHHHHHHHHHHHHHHh-
Confidence            6777778888899999999999999999999999999999999999988887653333222   233333322222221 


Q ss_pred             ccCCCCCCCCCHHHHHHHHhccCCCCCCCCCChhHhhcchHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhCCCccchhh
Q 021674           79 HSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGL  158 (309)
Q Consensus        79 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~wlp~~l~~~~g~s~~~~g~  158 (309)
                      .| |++++..+.+         .++++.-...++++.+||+..+.....++...+++.--.-+-+|=-+++|+|+.|+..
T Consensus       179 ~E-~r~~~~~~~~---------~~~~~~f~~a~~~~~~~~~a~~f~~fl~l~t~a~~~QD~iLEPygg~Vfgmsv~eTT~  248 (403)
T PF03209_consen  179 QE-PRRSRRAAAA---------ERPRPPFREAWRQVWASPQARRFFVFLFLGTLAFFMQDVILEPYGGEVFGMSVGETTR  248 (403)
T ss_pred             cc-cCCcccccCC---------CCCCccHHHHHHHHHhCCChhHHHHHHHHHHHHHHhhHHHcCCchhHHcCCCHHHHHH
Confidence            22 2221111000         0111111224677788888887776667767777777788999999999999999999


Q ss_pred             HhhhhHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHhhHHHHHHH-HHhhccCchHH-HHHHHHHHHhhhhhhhcc
Q 021674          159 FCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFL-TQLSHVDSPAM-AVLCMACSQGTDAFSQSG  236 (309)
Q Consensus       159 ~~~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~  236 (309)
                      +......+..+|..+.|++..|..+++      +.....+.....++.+ ......++++. -...+.++++.+.++...
T Consensus       249 Lta~~~~G~L~G~~~~g~~l~~~~~~~------~~a~~G~~~~~~~f~lii~a~~~~~~~~~~~~~~l~G~g~G~f~vga  322 (403)
T PF03209_consen  249 LTAFWGGGTLLGMLLAGFLLSRRLGKK------RTAALGCLLGALAFALIILAGPLGSPWLFRPGVFLLGLGNGLFTVGA  322 (403)
T ss_pred             HHHHHHHHHHHHHHHHHHHhcCCCCch------HHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHhhhHHHHHH
Confidence            999999999999999999888532211      1111111111111221 11223333332 233344455555554444


Q ss_pred             hhhhhhccCCCchHHHHHHHhHhHhhhhhHHHhHHHhhccc-----C-----CchHHHHHHHHHHHHHHHHHHhh
Q 021674          237 LYSNHQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQH-----G-----SWDDVFKVSVGLYLVGTAVWNLF  301 (309)
Q Consensus       237 ~~~~~~~~~~~~~g~a~~~~~~~~~lgg~i~~~~~g~l~~~-----~-----~~~~~~~~~~~~~~~~~~~~~~~  301 (309)
                      +.....-..+++.|+.+|.=...+.++..++..+.|.+.|.     +     +|..+|.+=+.+.+++..+....
T Consensus       323 ls~mM~lt~~~~aG~~mG~WGaaQA~A~Glg~~~GG~~~D~~~~~~~~~~~~aY~~VF~lEa~ll~~a~~ll~~l  397 (403)
T PF03209_consen  323 LSLMMDLTSAGRAGLFMGAWGAAQAIARGLGTFLGGALRDLVRALFGNSPALAYGVVFALEAVLLLAALVLLGRL  397 (403)
T ss_pred             HHHHHhCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcchHHHHHHHHHHHHHHHHHHHHHHh
Confidence            43333334567889999998998888889999999988774     2     35667766555555555444433

It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.

>PRK15462 dipeptide/tripeptide permease D; Provisional

Probab=99.45  E-value=4.3e-12  Score=118.87  Aligned_cols=172  Identities=16%  Similarity=0.212  Sum_probs=112.3

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhCCCccchhhHhhhhHHHHHHHHHHHHHHHHHH-HHcCCChhhHHHHHH
Q 021674          118 PPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTL-VSKGLSVTTVRKIMQ  196 (309)
Q Consensus       118 ~~~~~~~~~~~~~~~~~~~~~~wlp~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~G~l~dr~-~~r~~~~~~~~~~~~  196 (309)
                      +.++.+..........+|++..++|.|+++.+|++..+++.+.........++.+++|+++||+ |||+.       .+ 
T Consensus         9 ~~l~~l~~~~~~e~fs~Yg~~~~L~~yL~~~lgls~~~a~~i~~~~~~~~~l~~ligG~LaDRilGrrr~-------il-   80 (493)
T PRK15462          9 RAIYYVVALQIWEYFSFYGMRALLILYLTNQLKYDDNHAYELFSAYCSLVYVTPILGGFLADKVLGNRMA-------VM-   80 (493)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCcHHH-------HH-
Confidence            4456666666777788999999999999999999999999999888888899999999999999 87631       11 


Q ss_pred             HHhhHHHHHHHHHhhcc-CchH-HHHHHHHHHHhhhhhhhcchhhhhhcc-CC--CchHHHHHHHhHhHhhhhhHHHhHH
Q 021674          197 SIGFLGPAFFLTQLSHV-DSPA-MAVLCMACSQGTDAFSQSGLYSNHQDI-AP--RYSGVLLGLSNTAGVLAGVFGTAAT  271 (309)
Q Consensus       197 ~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~--~~~g~a~~~~~~~~~lgg~i~~~~~  271 (309)
                       .+.+..++........ +.+. ..+.......+.+.+ .+...+...|. ++  ++|..+.++.+...++|+.++|.+.
T Consensus        81 -iG~il~~lg~lll~~~~~~~~~~~l~l~li~iG~G~~-~~~~~alv~elfp~~~~~R~sgf~i~Y~~~nlG~~iap~l~  158 (493)
T PRK15462         81 -LGALLMAIGHVVLGASEIHPSFLYLSLAIIVCGYGLF-KSNVSCLLGELYEPTDPRRDGGFSLMYAAGNVGSIIAPIAC  158 (493)
T ss_pred             -HHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHhcccc-cccHHHHHHHHCCCCCccccceehHHHHHHHHHHHHHHHHH
Confidence             1111111111111111 1111 111111111222211 11111222232 22  3688889999999999999999999


Q ss_pred             HhhcccCCchHHHHHHHHHHHHHHHHHH
Q 021674          272 GYILQHGSWDDVFKVSVGLYLVGTAVWN  299 (309)
Q Consensus       272 g~l~~~~~~~~~~~~~~~~~~~~~~~~~  299 (309)
                      |++.++.+|+..|...++..+++.+.+.
T Consensus       159 g~L~~~~Gw~~~F~iaaigm~l~li~~~  186 (493)
T PRK15462        159 GYAQEEYSWAMGFGLAAVGMIAGLVIFL  186 (493)
T ss_pred             HHHHhhhChHHHHHHHHHHHHHHHHHHH
Confidence            9999888899999887666555554443

>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters

Probab=99.45  E-value=5.8e-17  Score=151.41  Aligned_cols=298  Identities=16%  Similarity=0.148  Sum_probs=163.7

Q ss_pred             CCcccccchhhHHHHHhccCCCcchhHHHHHHHhhhhhHHHHhhhhHHHHhhh---cCCcchhHhhhhHHHHHHHHHHhh
Q 021674            1 MGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHR---FGWPSVFYSFGSLGTVWFTVWLSK   77 (309)
Q Consensus         1 ~Gig~g~~~p~~~~~i~~~~p~~~rg~~~g~~~~~~~~g~~lg~~l~~~l~~~---~gWr~~F~i~~~~~~v~~~~~~~~   77 (309)
                      +|+|.|+..+....++.|..|+|+|++..++......+|.+++..++....+.   .+||..+.+..+++++.. +....
T Consensus       112 ~G~~~g~~~~~~~~~~~E~~~~~~R~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~Wr~~~~~~~~~~l~~~-~~~~~  190 (451)
T PF00083_consen  112 IGFGIGGAYVVSPIYISEIAPPKHRGFLSSLFQLFWALGILLASLIGYIVSYYSDNWGWRILLIFGAIPSLLVL-LLRFF  190 (451)
T ss_pred             cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc-ccccc
Confidence            68999999999999999999999999999999999999999988877655443   459999998777775543 33345


Q ss_pred             cccCCCCC---CCCCHHHHHHHH------------hccCCCC--CCCCCChhHhhcchHH----HHHHHHHHHHHH-HHH
Q 021674           78 AHSSPAED---PQLRPAEKKLIV------------SSCASKE--PVKTIPWGLILSKPPV----WALIVSHFCHNW-GTF  135 (309)
Q Consensus        78 ~~~~p~~~---~~~~~~~~~~~~------------~~~~~~~--~~~~~~~~~l~~~~~~----~~~~~~~~~~~~-~~~  135 (309)
                      .||+|+..   .+.++.++...+            ++..+++  .+++..++++++++..    ........+... +.+
T Consensus       191 ~pESP~wL~~~~~~~~A~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~g~~  270 (451)
T PF00083_consen  191 LPESPRWLLSKGRDEEAEKVLRKLRGKEIEDEEIEEIKAEKKESQESKASWRDLFRNKKYRKRLLIALLLQFFQQFSGIN  270 (451)
T ss_pred             cccccceecccccccccccccccccccccccccccccccccccccccceeeeeccccccccccccccccccccccccccc
Confidence            78888732   111111111000            0000000  0011346667776441    111222222222 233


Q ss_pred             HHHHhHHHHHHHHhCCCccchhhHhhhhHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHhhHHHHHHHH--Hhhcc
Q 021674          136 ILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLT--QLSHV  213 (309)
Q Consensus       136 ~~~~wlp~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~  213 (309)
                      ....+.|.++ +..|.+..  -.......+...++.+++.++.||+|||+......      .........+.  .....
T Consensus       271 ~~~~~~~~i~-~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~GRr~~~i~~~------~~~~~~~~~~~~~~~~~~  341 (451)
T PF00083_consen  271 FIFYYSPSIF-ENAGISNS--FLATLILGLVNFLGTLLAIFLIDRFGRRKLLIIGL------LLMAICSLILGIIFFLGV  341 (451)
T ss_pred             cccccccccc-cccccccc--ccccccccccccccccccccccccccccccccccc------cccccccccccccccccc
Confidence            4445555555 44677665  22223344556677778889999999886443211      00000111110  11111


Q ss_pred             Cc----hHHHHHHHHHHHhhhhhhhcch-hhhhhcc-CCCchHHHHHHHhHhHhhhhhHHHhHHHhhcccCCchHHHHHH
Q 021674          214 DS----PAMAVLCMACSQGTDAFSQSGL-YSNHQDI-APRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSWDDVFKVS  287 (309)
Q Consensus       214 ~~----~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-~~~~~g~a~~~~~~~~~lgg~i~~~~~g~l~~~~~~~~~~~~~  287 (309)
                      +.    ....+.+............... +....|. +.+.|+.+.++.+..++++++++|.+...+.+..+....+.+.
T Consensus       342 ~~~~~~~~~~i~~~~l~~~~~~~g~~~~~~~~~~ElfPt~~R~~~~~~~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~i~  421 (451)
T PF00083_consen  342 SSSSWWSILSIVFLALFFAFFSLGWGPLPWIYTAELFPTKVRSTGIGLSYAVGRIGGFIIPFLFPYLFNNLGGWGVFLIF  421 (451)
T ss_pred             ccccccccccceeeeeccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccchhh
Confidence            11    1111111111100001111111 1222344 4568999999999999999999999988888775423344444


Q ss_pred             HHHHHHHHHHHH--hhcCCcccc
Q 021674          288 VGLYLVGTAVWN--LFSTGEKVV  308 (309)
Q Consensus       288 ~~~~~~~~~~~~--~~~~~~~~~  308 (309)
                      +++.+++.+...  ...||++++
T Consensus       422 ~~~~~i~~i~~~~~lpET~g~~l  444 (451)
T PF00083_consen  422 AGVCLIAIIFVYFFLPETKGKTL  444 (451)
T ss_pred             HHHHHHHHhheeEEEeeCCCCCH
Confidence            444444443333  336666553

Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane

>PRK09584 tppB putative tripeptide transporter permease; Reviewed

Probab=99.43  E-value=1.1e-11  Score=117.48  Aligned_cols=177  Identities=16%  Similarity=0.213  Sum_probs=110.4

Q ss_pred             CCChhHhhcchH-HHHHHHHHHHHHHHHHHHHHhHHHHHHHHhCCCccchhhHhhhhHHHHHHHHHHHHHHHHH-HHHcC
Q 021674          108 TIPWGLILSKPP-VWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADT-LVSKG  185 (309)
Q Consensus       108 ~~~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~wlp~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~G~l~dr-~~~r~  185 (309)
                      ..|.+ ++|+|+ +|......++...++|++.+|+|.|+++++|+|..+++..............+++|+++|| +|+|+
T Consensus        11 ~~~~~-~~~~p~~~~~~~~~~~~~~~~~y~~~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~~~~G~LaDr~~G~r~   89 (500)
T PRK09584         11 SVSLN-AFKQPKAFYLIFSIELWERFGYYGLQGIMAVYLVKQLGMSEADSITLFSSFSALVYGLVAIGGWLGDKVLGTKR   89 (500)
T ss_pred             CCChh-hhcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHH
Confidence            34444 557764 7777778888888999999999999999999999988877766555555556789999999 58763


Q ss_pred             CChhhHHHHHHHHhhHHHHHHHHHhhcc-CchHHHHH-HHHHHHhhhhhhhcchhhhhhcc-CC--CchHHHHHHHhHhH
Q 021674          186 LSVTTVRKIMQSIGFLGPAFFLTQLSHV-DSPAMAVL-CMACSQGTDAFSQSGLYSNHQDI-AP--RYSGVLLGLSNTAG  260 (309)
Q Consensus       186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-~~--~~~g~a~~~~~~~~  260 (309)
                      .       .+  .+.....+........ +....... ....+.+.+.. .+...+...+. ++  +++..+.++.++..
T Consensus        90 ~-------~~--~g~~~~~ig~~l~~~~~~~~~~l~~~~~l~gig~g~~-~~~~~~l~~~~f~~~~~~~~~~~~~~~~~~  159 (500)
T PRK09584         90 V-------IM--LGAIVLAIGYALVAWSGHDAGIVYMGMATIAVGNGLF-KANPSSLLSTCYEKDDPRLDGAFTMYYMSI  159 (500)
T ss_pred             H-------HH--HHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHhhhcc-cCCHHHHHHHhcCCCchhhhhcchHHHHHH
Confidence            1       11  1111111111111111 12222211 11222222211 11111222222 22  23455778889999


Q ss_pred             hhhhhHHHhHHHhhcccCCchHHHHHHHHHHHHHH
Q 021674          261 VLAGVFGTAATGYILQHGSWDDVFKVSVGLYLVGT  295 (309)
Q Consensus       261 ~lgg~i~~~~~g~l~~~~~~~~~~~~~~~~~~~~~  295 (309)
                      ++|+.++|.+.|++.|+.+|+..|.+.++..+++.
T Consensus       160 ~iG~~~gp~i~g~l~~~~g~~~~F~i~~i~~~i~~  194 (500)
T PRK09584        160 NIGSFFSMLATPWLAAKYGWSVAFALSVVGMLITV  194 (500)
T ss_pred             HHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHH
Confidence            99999999999999998889999988775555443

>PRK11462 putative transporter; Provisional

Probab=99.41  E-value=2.1e-10  Score=107.77  Aligned_cols=241  Identities=10%  Similarity=0.022  Sum_probs=130.4

Q ss_pred             HHHHhccCC-CcchhHHHHHHHhhhhhHHHHhhhhHHHHhhhc-------CCcchhHhhhhHHHHHHHHHHhhcccCCCC
Q 021674           13 NNILSKWVP-VAERSRSLALVYSGMYLGSVTGLAFSPFLIHRF-------GWPSVFYSFGSLGTVWFTVWLSKAHSSPAE   84 (309)
Q Consensus        13 ~~~i~~~~p-~~~rg~~~g~~~~~~~~g~~lg~~l~~~l~~~~-------gWr~~F~i~~~~~~v~~~~~~~~~~~~p~~   84 (309)
                      .++.+|..+ ++||++..++-..+.++|..+++.+...+.+.+       ||+....+.++++++...+.+...+|++++
T Consensus       131 ~al~~~lt~d~~eRt~l~s~r~~~~~iG~~~~~~~~~plv~~~g~~~~~~g~~~~~~i~~ii~~i~~~i~~~~~kE~~~~  210 (460)
T PRK11462        131 CALGGVITNDPTQRISLQSWRFVLATAGGMLSTVLMMPLVNLIGGDNKPLGFQGGIAVLSVVAFMMLAFCFFTTKERVEA  210 (460)
T ss_pred             HHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHHHHHHHHHHHHHhcceeccCC
Confidence            356677775 999999999999999999888877665555543       578877777777665544444333443211


Q ss_pred             CCCCCHHHHHHHHhccCCCCCCCCCChhHhhcchHHHHHHHHHHHHHHHH---HHHHHhHHHHHHHHhCCCccchhhHhh
Q 021674           85 DPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGT---FILLTWMPTYYNQVLHFNLTESGLFCV  161 (309)
Q Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~---~~~~~wlp~~l~~~~g~s~~~~g~~~~  161 (309)
                      ++     +          +.+ -+...+.++|||+++.+....++.....   .+...+.+.|.   .|.. ...+.++.
T Consensus       211 ~~-----~----------~~~-~~~~l~~~~~Nk~~~~l~~~~~~~~~~~~~~~~~~~y~~~y~---~g~~-~~~~~~l~  270 (460)
T PRK11462        211 PP-----T----------TTS-MREDLRDIWQNDQWRIVGLLTIFNILAVCVRGGAMMYYVTWI---LGTP-EVFVAFLT  270 (460)
T ss_pred             Cc-----c----------CCC-HHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhHhhhhhhhh---cCCh-HHHHHHHH
Confidence            10     0          000 0112456788888776655544444433   33344444443   3432 33445556


Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHhhHHHHHHHHHhhccCchH-HHHHHHHHHHhhhhhh--hcchh
Q 021674          162 LPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSPA-MAVLCMACSQGTDAFS--QSGLY  238 (309)
Q Consensus       162 ~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~--~~~~~  238 (309)
                      ...++..++++++++++||+++|+....      .........+..... ..++.. ..+.....+.+.+...  ...+.
T Consensus       271 ~~~i~~iig~~l~~~l~~r~gkk~~~~~------~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~g~~~~~~~~l~~~m~  343 (460)
T PRK11462        271 TYCVGNLIGSALAKPLTDWKCKVTIFWW------TNALLAVISLAMFFV-PMQASITMFVFIFVIGVLHQLVTPIQWVMM  343 (460)
T ss_pred             HHHHHHHHHHHHHHHHHHHhChHHHHHH------HHHHHHHHHHHHHHh-chhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            6678888999999999999987632110      011111111111111 111121 1111111222221111  01122


Q ss_pred             hhhhc---cC--CCchHHHHHHHhHhHhhhhhHHHhHHHhhcccCCc
Q 021674          239 SNHQD---IA--PRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSW  280 (309)
Q Consensus       239 ~~~~~---~~--~~~~g~a~~~~~~~~~lgg~i~~~~~g~l~~~~~~  280 (309)
                      +...|   ..  .+..|...+..+...++|.++++.+.|.+++..||
T Consensus       344 ad~~d~~e~~tG~r~~g~~~a~~~f~~Klg~alg~~i~g~iL~~~Gy  390 (460)
T PRK11462        344 SDTVDYGEWCNGKRLTGISFAGTLFVLKLGLAFGGALIGWMLAYGGY  390 (460)
T ss_pred             HHhHhhhHHhcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence            21111   11  22346667777788999999999999998876433

>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]

Probab=99.41  E-value=4.6e-12  Score=114.07  Aligned_cols=251  Identities=18%  Similarity=0.161  Sum_probs=153.0

Q ss_pred             HHHHhccCCCcchhHHHHHHHhhhhhHHHHhhhhHHHHhhhc------CCcc--hhHhhhhHHHHHHHHHHhhcccCCCC
Q 021674           13 NNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRF------GWPS--VFYSFGSLGTVWFTVWLSKAHSSPAE   84 (309)
Q Consensus        13 ~~~i~~~~p~~~rg~~~g~~~~~~~~g~~lg~~l~~~l~~~~------gWr~--~F~i~~~~~~v~~~~~~~~~~~~p~~   84 (309)
                      .++.+.|||++||+.+..+=..++.+|.++|..+...++++-      .|.-  .|+..+.++.+.+.+.....+++|+.
T Consensus       162 skiA~~WF~~~qra~A~~~~v~~n~LGvavg~llppilV~~~~~~~~~~~~~~~~f~~~~~l~~l~l~l~~~~~~~~P~t  241 (480)
T KOG2563|consen  162 SKIAAVWFPPDQRAIATVLGVMGNPLGVAVGFLLPPILVPSSKDSEDNSWLFFTLFLGVECLAALLLALVLFVFTKKPPT  241 (480)
T ss_pred             cHHHHhhCCcchhhhhhhHHHhcchHHHHHHhhccceecCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCC
Confidence            478899999999999999999999999999998888887653      5766  35545555554444555555666665


Q ss_pred             CCCCCHHHHHHHHhccCCCCCCCCCChhHhhcchHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhCCCccchhhHhhhhH
Q 021674           85 DPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPW  164 (309)
Q Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~wlp~~l~~~~g~s~~~~g~~~~~~~  164 (309)
                      +|....+...       +.+-  ....+.++||+++..++..+......+++..+.+-.-+ ...|++...+|.......
T Consensus       242 Pps~s~~~~~-------~~~f--~~si~~~~~n~~F~il~~~ygi~~g~F~~l~~~l~~~l-~~sgY~~~~aG~ig~l~i  311 (480)
T KOG2563|consen  242 PPSASQAALQ-------DASF--PKSIKSCFKNRQFIILAICYGIGLGLFNSLSTLLNLAL-CPSGYEGVFAGYIGALMI  311 (480)
T ss_pred             CCchhHhhhh-------cCcH--HHHHHHHHcCccHHHHHHHHhhhHHHHHHHHHHhhhcc-ccccCCccccchhHHHHH
Confidence            5433221110       0000  12356789999988877776665555666666554344 346888889999999899


Q ss_pred             HHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHhhHHHHHHHHH-hhccCchHHHHHHHHHHHhhhhhhhcch-h-hhh
Q 021674          165 LTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQ-LSHVDSPAMAVLCMACSQGTDAFSQSGL-Y-SNH  241 (309)
Q Consensus       165 ~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~  241 (309)
                      +++.+++.+.|.+.||.++-+.. .   +......+...+.+... ....+.......+...++..  ....++ + ...
T Consensus       312 v~Gmlga~~~gii~Dktk~fk~~-~---~v~~~~~~v~~~~l~~~t~~~~~~viv~~t~~~~g~~~--~~~~Pig~Elgv  385 (480)
T KOG2563|consen  312 VAGMLGALASGIIADKTKKFKLT-T---LVLYLFALVGTLMLLTCTLFLGDSVIVFTTCGLLGFFG--TGYLPIGFELGV  385 (480)
T ss_pred             HHHHHHHHHHHhhhhhhhhHHHH-H---HHHHHHHHHHHHHHHHhhccCCceEehhhhHHHHHHhh--cCCCCcceeeee
Confidence            99999999999999998542111 0   01111111111111111 11111111222222222211  111111 0 012


Q ss_pred             hccCCCchHHHHHHHhHhHhhhhhHHHhHHHhhcccCC
Q 021674          242 QDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGS  279 (309)
Q Consensus       242 ~~~~~~~~g~a~~~~~~~~~lgg~i~~~~~g~l~~~~~  279 (309)
                      +...|..=++.+|+.|..+++-+.+-..+.+...+..+
T Consensus       386 E~TyPv~E~tSsGll~~~gq~f~~~~~~~~~~~~~~~~  423 (480)
T KOG2563|consen  386 ETTYPVAEGTSSGLLNLSGQIFGVILVFIMGILAEDLG  423 (480)
T ss_pred             eeccccCCcccceeEEeehhHHHHHHHHHHHHHhhccC
Confidence            33567666788899999999999999999999887643

>PRK10429 melibiose:sodium symporter; Provisional

Probab=99.39  E-value=3e-11  Score=113.82  Aligned_cols=253  Identities=15%  Similarity=0.080  Sum_probs=138.2

Q ss_pred             hHHHHHhccC-CCcchhHHHHHHHhhhhhHHHHhhhhHHHHhhh-------cCCcchhHhhhhHHHHHHHHHHhhcccCC
Q 021674           11 AMNNILSKWV-PVAERSRSLALVYSGMYLGSVTGLAFSPFLIHR-------FGWPSVFYSFGSLGTVWFTVWLSKAHSSP   82 (309)
Q Consensus        11 ~~~~~i~~~~-p~~~rg~~~g~~~~~~~~g~~lg~~l~~~l~~~-------~gWr~~F~i~~~~~~v~~~~~~~~~~~~p   82 (309)
                      .-.++..|.. +++||.+..++-....++|..+.+.+...+.+.       .+|+....+.+++.++.....++..+|++
T Consensus       126 p~~al~~~lt~~~~eR~~l~~~~~~~~~ig~~~~~~~~~~~~~~~g~~~~~~g~~~~~~i~~~~~~~~~~~~~~~~~e~~  205 (473)
T PRK10429        126 PFWSLVPTLTLDKREREQLVPYPRFFASLAGFVTAGFTLPFVNYVGGGDRGFGFQMFTLVLIAFFIVSTIITLRNVHEVY  205 (473)
T ss_pred             hHHhhhHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHHHHHHHHHHHHHcCceecC
Confidence            3446778888 699999999997777777766665554433332       35677666666655544333333344432


Q ss_pred             CCCCCCCHHHHHHHHhccCCCCCCCCCChhHhhcchHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhCCCccchhhHhhh
Q 021674           83 AEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVL  162 (309)
Q Consensus        83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~wlp~~l~~~~g~s~~~~g~~~~~  162 (309)
                      +.+.. ++++        .++.+ -+..++.++|||+++.+....++.....+......+.|.+...+ +....+.+...
T Consensus       206 ~~~~~-~~~~--------~~~~~-~~~~~~~~~~n~~~~~ll~~~~~~~~~~~~~~~~~~y~~~y~~~-~~~~~~~~~~~  274 (473)
T PRK10429        206 SSDNQ-VSAE--------GSHLT-LKDIVALIYKNDQLSCLLGMALAYNIASNIINGFAIYYFTYVIG-DADLFPYYLSY  274 (473)
T ss_pred             Ccccc-cccc--------ccCCC-HHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHhhheeeEEEEECC-CHHHHHHHHHH
Confidence            11100 0000        00000 01123556789988887777777766666666666655544433 44556666666


Q ss_pred             hHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHhhHHHHHHHHHh--hccCchHHHH-HHHHHHHhhhhhh--hcch
Q 021674          163 PWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQL--SHVDSPAMAV-LCMACSQGTDAFS--QSGL  237 (309)
Q Consensus       163 ~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~-~~~~~~~~~~~~~--~~~~  237 (309)
                      ..++..++.++.++++||+|+|+....      .....+...+.....  ...++....+ .....+.+.+...  ...+
T Consensus       275 ~~i~~ii~~~~~~~l~~r~gkk~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~g~~~~~~~~~~~am  348 (473)
T PRK10429        275 AGAANLVTLILFPRLVKSLSRRILWAG------ASIFPVLSCGVLLLMGLAAPHNALLIVIAGILLNIGTALFWVLQVIM  348 (473)
T ss_pred             HHHHHHHHHHHHHHHHHHcCcHHHHHH------HHHHHHHHHHHHHHHhccCchhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            668888999999999999997742111      001101111111111  1122222222 1122222222111  1111


Q ss_pred             hhhhhc-----cCCCchHHHHHHHhHhHhhhhhHHHhHHHhhcccCCc
Q 021674          238 YSNHQD-----IAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSW  280 (309)
Q Consensus       238 ~~~~~~-----~~~~~~g~a~~~~~~~~~lgg~i~~~~~g~l~~~~~~  280 (309)
                      .+...|     ...+..|...+..++...++.++++.+.|.+++..||
T Consensus       349 ~ad~id~~e~~tG~R~~G~~~s~~~~~~K~~~al~~~i~g~~l~~~Gy  396 (473)
T PRK10429        349 VADTVDYGEYKLGIRCESIAYSVQTMVVKGGSAFAAFFIGVVLGLIGY  396 (473)
T ss_pred             HhhhhhhhhHhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence            111111     1223468899999999999999999999999876433

>PRK09528 lacY galactoside permease; Reviewed

Probab=99.38  E-value=1.2e-11  Score=114.58  Aligned_cols=181  Identities=16%  Similarity=0.123  Sum_probs=112.9

Q ss_pred             HhhcchHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhCCCccchhhHhhhhHHHHHHHHHHHHHHHHHHHHcCCChhhHH
Q 021674          113 LILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVR  192 (309)
Q Consensus       113 ~l~~~~~~~~~~~~~~~~~~~~~~~~~wlp~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~  192 (309)
                      ..+|+|++|.+...+++...+.+....++|.|+++++|+|+.+.|+..+...++..++.++.|+++||+++|+..     
T Consensus         5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~g~~~s~~~l~~~i~~~~~G~l~Dr~g~r~~~-----   79 (420)
T PRK09528          5 YYLKNPNYWIFSLFFFFFFFIWSSWFSFFPIWLHDINGLSGTDTGIIFSANSLFALLFQPLYGLISDKLGLKKHL-----   79 (420)
T ss_pred             hhhcCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHH-----
Confidence            356788999988888888877788899999999999999999999999999999999999999999999976421     


Q ss_pred             HHHHHHhhHHHHHH-HHHhhccC--chHHHHHHHHHHHhhhh-h-hhcchhhhhhccCCCchHHHHHHHhHhHhhhhhHH
Q 021674          193 KIMQSIGFLGPAFF-LTQLSHVD--SPAMAVLCMACSQGTDA-F-SQSGLYSNHQDIAPRYSGVLLGLSNTAGVLAGVFG  267 (309)
Q Consensus       193 ~~~~~~~~~~~~~~-~~~~~~~~--~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~g~a~~~~~~~~~lgg~i~  267 (309)
                        ............ ........  ...........+...+. . ..........+..+++++...+..+..+++|..++
T Consensus        80 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~  157 (420)
T PRK09528         80 --LWIISGLLVLFGPFFIYVFAPLLQYNILLGAIVGGIYLGFGFLAGAGAIEAYIERVSRRSGFEYGRARMWGSLGWALC  157 (420)
T ss_pred             --HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccchhhhhhHHHHHHhhccccchhhHHhhhHHHHHH
Confidence              111111110000 00000000  00000101111111110 0 00011111111123345667778888889999999


Q ss_pred             HhHHHhhcccCCchHHHHHHHHHHHHHHHHHHhh
Q 021674          268 TAATGYILQHGSWDDVFKVSVGLYLVGTAVWNLF  301 (309)
Q Consensus       268 ~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~  301 (309)
                      |.+.|.+.+. +|+..|++.+++.+++.+.+...
T Consensus       158 ~~~~g~l~~~-~~~~~f~~~~~~~~~~~~~~~~~  190 (420)
T PRK09528        158 AFIAGILFNI-NPQINFWLGSGSALILLVLLFFA  190 (420)
T ss_pred             HHHHHHHHhc-CchHhHHHHHHHHHHHHHHHhcc
Confidence            9999999875 68888887776666555444443

>PRK11646 multidrug resistance protein MdtH; Provisional

Probab=99.37  E-value=3.7e-11  Score=110.83  Aligned_cols=170  Identities=16%  Similarity=0.203  Sum_probs=113.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHhHHHHHHHHhCCCccchhhHhhhhHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHhh
Q 021674          121 WALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGF  200 (309)
Q Consensus       121 ~~~~~~~~~~~~~~~~~~~wlp~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~~~~  200 (309)
                      +.+....++...+.+.....+|.|+++++|+|+.+.|+......+...+..++.|+++||+++|+.        +. .+.
T Consensus        13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~gl~~~~~~l~~~~~~~~~G~l~dr~g~k~~--------l~-~~~   83 (400)
T PRK11646         13 YFLLIDNMLVVLGFFVVFPLISIRFVDQLGWAAVMVGIALGLRQFIQQGLGIFGGAIADRFGAKPM--------IV-TGM   83 (400)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHhhhhHHHHHhCchHH--------HH-HHH
Confidence            445567777788889999999999999999999999999999899998899999999999987632        11 111


Q ss_pred             HHHHHHHHHhhccCchHHHHHH-HHHHHhhhhhhhcchhhhhh-ccCCCchHHHHHHHhHhHhhhhhHHHhHHHhhcccC
Q 021674          201 LGPAFFLTQLSHVDSPAMAVLC-MACSQGTDAFSQSGLYSNHQ-DIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQHG  278 (309)
Q Consensus       201 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~a~~~~~~~~~lgg~i~~~~~g~l~~~~  278 (309)
                      .............++.+..... ...+.+.+ ...+...+... ..++++++.+.++.+...++|..++|.+.|++. ..
T Consensus        84 ~~~~~~~~~~~~~~~~~~l~~~~~l~g~~~~-~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~g~l~-~~  161 (400)
T PRK11646         84 LMRAAGFATMAIAHEPWLLWLSCILSGLGGT-LFDPPRTALVIKLIRPHQRGRFFSLLMMQDSAGAVIGALLGSWLL-QY  161 (400)
T ss_pred             HHHHHHHHHHHHhccHHHHHHHHHHHHHHHH-HHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-Hh
Confidence            1111111111222333332222 22222221 11122222222 345678999999999999999999999999998 55


Q ss_pred             CchHHHHHHHHHHHHHHHHHHhh
Q 021674          279 SWDDVFKVSVGLYLVGTAVWNLF  301 (309)
Q Consensus       279 ~~~~~~~~~~~~~~~~~~~~~~~  301 (309)
                      +|+..|++.+.+.+++.+....+
T Consensus       162 g~~~~f~~~~~~~~~~~i~~~~~  184 (400)
T PRK11646        162 DFRLVCATGAVLFVLAAAFNAWL  184 (400)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHh
Confidence            79998888776666555443333

>PRK10504 putative transporter; Provisional

Probab=99.37  E-value=4.4e-11  Score=112.49  Aligned_cols=173  Identities=14%  Similarity=0.172  Sum_probs=114.9

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhCCCccchhhHhhhhHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHH
Q 021674          118 PPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQS  197 (309)
Q Consensus       118 ~~~~~~~~~~~~~~~~~~~~~~wlp~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~  197 (309)
                      +++|.+....++.....+.+.+++|.+.++ +|.|..+.+...+...++..++.++.|+++||+|||+..        . 
T Consensus        10 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~-~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~--------~-   79 (471)
T PRK10504         10 WQLWIVAFGFFMQSLDTTIVNTALPSMAQS-LGESPLHMHMVIVSYVLTVAVMLPASGWLADRVGVRNIF--------F-   79 (471)
T ss_pred             HHHHHHHHHHHHHHHhHHHHHHHHHHHHHH-hCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHH--------H-
Confidence            356777777777777778888999999875 899999999998888899999999999999999987321        1 


Q ss_pred             HhhHHHHHHHHHhhccCchHHHHHH-HHHHHhhhhhhhcchhhhhhc-cCCCchHHHHHHHhHhHhhhhhHHHhHHHhhc
Q 021674          198 IGFLGPAFFLTQLSHVDSPAMAVLC-MACSQGTDAFSQSGLYSNHQD-IAPRYSGVLLGLSNTAGVLAGVFGTAATGYIL  275 (309)
Q Consensus       198 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~-~~~~~~g~a~~~~~~~~~lgg~i~~~~~g~l~  275 (309)
                      .+..............++....... ...+.+.+.. .+.......+ .++++++.+.++.+...++|..++|.+.|.+.
T Consensus        80 ~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~g~l~  158 (471)
T PRK10504         80 TAIVLFTLGSLFCALSGTLNELLLARVLQGVGGAMM-VPVGRLTVMKIVPREQYMAAMTFVTLPGQVGPLLGPALGGLLV  158 (471)
T ss_pred             HHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhhhHHH-HHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHhhhHHHHHHH
Confidence            1111111111111122333322222 2222222211 1111222223 35567899999999999999999999999999


Q ss_pred             ccCCchHHHHHHHHHHHHHHHHHHhh
Q 021674          276 QHGSWDDVFKVSVGLYLVGTAVWNLF  301 (309)
Q Consensus       276 ~~~~~~~~~~~~~~~~~~~~~~~~~~  301 (309)
                      |+.+|+..|.+...+..++.+.....
T Consensus       159 ~~~gw~~~f~~~~~~~~l~~~~~~~~  184 (471)
T PRK10504        159 EYASWHWIFLINIPVGIIGAIATLML  184 (471)
T ss_pred             hhccHHHHHHHHHHHHHHHHHHHHHh
Confidence            99889999988776666555444444

>PRK11663 regulatory protein UhpC; Provisional

Probab=99.35  E-value=4.8e-11  Score=111.21  Aligned_cols=163  Identities=15%  Similarity=0.115  Sum_probs=105.5

Q ss_pred             HHHHHHHHHHHHHHHHHHhHHHHHHHHhCCCccchhhHhhhhHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHhhH
Q 021674          122 ALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFL  201 (309)
Q Consensus       122 ~~~~~~~~~~~~~~~~~~wlp~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~~~~~  201 (309)
                      ...+.+++.+...+.+..++|.+.++ +|+|..+.+++.+...++..++.++.|+++||+|+|+...         .+..
T Consensus        27 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~r~~~~---------~~~~   96 (434)
T PRK11663         27 TMYLGYALFYFTRKSFNAAMPEMLAD-LGLSRSDIGLLATLFYITYGVSKFVSGIVSDRSNARYFMG---------IGLI   96 (434)
T ss_pred             HHHHHHHHHHHhhhhHHHhhHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHhhhhHHHhhcCCchhHH---------HHHH
Confidence            33444455445556777889888865 8999999999999999999999999999999999774211         1111


Q ss_pred             HHHHHHHHhhccCchHHHHHH-HHHHHhhhhhhhcchhhhhhc-cCCCchHHHHHHHhHhHhhhhhHHHhHHHhhcccCC
Q 021674          202 GPAFFLTQLSHVDSPAMAVLC-MACSQGTDAFSQSGLYSNHQD-IAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGS  279 (309)
Q Consensus       202 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~-~~~~~~g~a~~~~~~~~~lgg~i~~~~~g~l~~~~~  279 (309)
                      ...+........++....... ...+.+.+ ...........+ .++++++.+.++.+...++|+.++|.+.+.+.++.+
T Consensus        97 ~~~~~~~~~~~~~~~~~l~~~~~l~g~~~g-~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~~g  175 (434)
T PRK11663         97 ATGIINILFGFSSSLWAFALLWVLNAFFQG-WGWPVCAKLLTAWYSRTERGGWWAIWNTAHNVGGALIPLVVGAIALHYG  175 (434)
T ss_pred             HHHHHHHHHHHHhHHHHHHHHHHHHHHHHH-ccchHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccc
Confidence            111111112222233222221 11222221 111222222233 345689999999999999999999999999999888


Q ss_pred             chHHHHHHHHHHHHHH
Q 021674          280 WDDVFKVSVGLYLVGT  295 (309)
Q Consensus       280 ~~~~~~~~~~~~~~~~  295 (309)
                      |+..|.+.+++.++..
T Consensus       176 w~~~f~~~~i~~~~~~  191 (434)
T PRK11663        176 WRYGMMIAGIIAIVVG  191 (434)
T ss_pred             HHHHHHHHHHHHHHHH
Confidence            9999988766554443

>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]

Probab=99.33  E-value=4.8e-11  Score=113.60  Aligned_cols=184  Identities=14%  Similarity=0.116  Sum_probs=116.2

Q ss_pred             CCcccccchhhHHHHHhccCCCcchhHHHHHHHhhhhhHHHHhhhhHHHHhhh-cCCcchhHhhhhHHHHHHHHHHhhcc
Q 021674            1 MGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHR-FGWPSVFYSFGSLGTVWFTVWLSKAH   79 (309)
Q Consensus         1 ~Gig~g~~~p~~~~~i~~~~p~~~rg~~~g~~~~~~~~g~~lg~~l~~~l~~~-~gWr~~F~i~~~~~~v~~~~~~~~~~   79 (309)
                      +|+|.|+.......+++|..|++.||...+.......+|..++..++...-+. ++||..+.+..+.+++..+. +...|
T Consensus       152 ~G~g~G~~~~~~piy~sEiap~~~RG~l~~~~~l~~~~Gi~~~~~~~~~~~~~~~~Wr~~~~~~~i~~~~~~~~-~~~~p  230 (513)
T KOG0254|consen  152 TGLGVGGASVLAPVYISEIAPAHIRGTLVSLYQLFITIGILLGYCINYGTSKVYAGWRIPLGLALIPAVILALG-MLFLP  230 (513)
T ss_pred             hccchhhhhhcchhhHhhcCChhhhHHHHHHHHHHHHHHHHHHHHHhhhhccCCccHHHHHHHHHHHHHHHHHH-HHhCC
Confidence            58999999999999999999999999999999999999999996555544332 59999888866666655444 55678


Q ss_pred             cCCCCCCCC-CHHHH-HHH---Hh---------------cc-CCC-CCCCCCChhHhhcc----hHHHHHHHHHHHHHHH
Q 021674           80 SSPAEDPQL-RPAEK-KLI---VS---------------SC-ASK-EPVKTIPWGLILSK----PPVWALIVSHFCHNWG  133 (309)
Q Consensus        80 ~~p~~~~~~-~~~~~-~~~---~~---------------~~-~~~-~~~~~~~~~~l~~~----~~~~~~~~~~~~~~~~  133 (309)
                      |+|+..-+. +.+|. +..   +.               +. .+. ....+..++++++.    +......+..+-...+
T Consensus       231 esp~~L~~~g~~~~a~~~l~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~l~~fqq~tG  310 (513)
T KOG0254|consen  231 ESPRWLIEKGRLEEAKRSLKRLRGLSPEDVEVELELLKIKLLVEAEVAEGKASWGELFSPKVRKRLIIGLLLQLFQQLTG  310 (513)
T ss_pred             CChHHHHHcCChHHHHHHHHHHhCCCCcchHHHHHHHHHHHHHhhhcccccccHHHhcCcchHHHHHHHHHHHHHHHHhC
Confidence            888632111 11111 100   00               00 000 00011123444431    1122233333444445


Q ss_pred             HHHHHHhHHHHHHHHhCCCccchhhHhhhhHHHHHHHHHHHHHHHHHHHHcCCC
Q 021674          134 TFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLS  187 (309)
Q Consensus       134 ~~~~~~wlp~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~G~l~dr~~~r~~~  187 (309)
                      .....+|.+.++++ .|.+... .......++...+++.++.++.||+|||+..
T Consensus       311 ~~~~~~Y~~~if~~-~g~~~~~-~~~~~~~~~v~~~~t~~~~~lvd~~gRr~ll  362 (513)
T KOG0254|consen  311 INYVFYYSTTIFKS-AGLKSDT-FLASIILGVVNFLGTLVATYLVDRFGRRKLL  362 (513)
T ss_pred             CceEEeehHHHHHh-cCCCCch-HHHHHHHHHHHHHHHHHHHHHHHHhccHHHH
Confidence            56666888888765 4776443 4445566778888888999999999987543

>TIGR00882 2A0105 oligosaccharide:H+ symporter

Probab=99.32  E-value=6.4e-11  Score=108.94  Aligned_cols=175  Identities=14%  Similarity=0.103  Sum_probs=107.8

Q ss_pred             chHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhCCCccchhhHhhhhHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHH
Q 021674          117 KPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQ  196 (309)
Q Consensus       117 ~~~~~~~~~~~~~~~~~~~~~~~wlp~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~  196 (309)
                      ||.+|.....+++...+...+..++|.|+++++|+|+.+.|+..+...++..++.++.|+++||+|||+....      .
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~l~~~i~~~~~G~l~Dr~grr~~~~~------~   74 (396)
T TIGR00882         1 NTNFWMFGLFFFLYFFIMSAYFPFFPIWLHDVNGLSKTDTGIVFSCISLFSILFQPLFGLISDKLGLKKHLLW------I   74 (396)
T ss_pred             ChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHH------H
Confidence            5778888888888888888888999999999999999999999999999999999999999999997742211      0


Q ss_pred             HHhhHHHHHHHHHhhccC---c-hHHHHHH--HHHHHhhhhhhhcchhhhhhccCCCchHHHHHHHhHhHhhhhhHHHhH
Q 021674          197 SIGFLGPAFFLTQLSHVD---S-PAMAVLC--MACSQGTDAFSQSGLYSNHQDIAPRYSGVLLGLSNTAGVLAGVFGTAA  270 (309)
Q Consensus       197 ~~~~~~~~~~~~~~~~~~---~-~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~g~a~~~~~~~~~lgg~i~~~~  270 (309)
                      .................+   . .......  ...+.+... ..+.......+..+ .++...+.....+++|..++|.+
T Consensus        75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~-~~~~~~g~~~~~~~~g~~~g~~~  152 (396)
T TIGR00882        75 ISGLLVLFAPFFIYVFGPLLQSNILVGAIVGGLYLGFVFSA-GAGAIEAYIEKVSR-NSNFEYGKARMFGCVGWALCASI  152 (396)
T ss_pred             HHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhcc-chhhHHHHHHHhhh-hcccccchhhhhcccHHHHHHHH
Confidence            011111111000011111   0 1111111  111111111 11111111122222 23345566677788999999999


Q ss_pred             HHhhcccCCchHHHHHHHHHHHHHHHHHHh
Q 021674          271 TGYILQHGSWDDVFKVSVGLYLVGTAVWNL  300 (309)
Q Consensus       271 ~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~  300 (309)
                      .|.+.+. +|+..|.+.+.+.++..+....
T Consensus       153 ~g~l~~~-~~~~~f~~~~~~~~~~~~~~~~  181 (396)
T TIGR00882       153 AGILFSI-DPQIVFWLGSGFALILMLLLMF  181 (396)
T ss_pred             Hhhhhcc-CchHHHHHHHHHHHHHHHHHHH
Confidence            9988765 7998898877666665544433

>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms

Probab=99.32  E-value=1e-10  Score=105.02  Aligned_cols=163  Identities=19%  Similarity=0.299  Sum_probs=108.4

Q ss_pred             HHHHHHHHHHHHHHHhHHHHHHHHhCCCccchhhHhhhhHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHhhHHHH
Q 021674          125 VSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPA  204 (309)
Q Consensus       125 ~~~~~~~~~~~~~~~wlp~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~~~~~~~~  204 (309)
                      +..++...........+|.++.+++|.|..+.+++.+...++..++.+..|+++||+|||+        .+. .+.....
T Consensus         3 l~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~--------~l~-~~~~~~~   73 (352)
T PF07690_consen    3 LAFFLSGFGFSIISPALPLYLAEELGLSPSQIGLLFSAFFLGSALFSPFAGYLSDRFGRRR--------VLI-IGLLLFA   73 (352)
T ss_dssp             HHHHHHHHHHHHHHHHHH-HHHCCSTTTSHCHHHHHHHHHHHHHHHHHHHHHHHHHS-HHH--------HHH-HHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCee--------eEe-ehhhhhh
Confidence            4455556666667778887888889999999999999999999999999999999999873        111 1111111


Q ss_pred             HHHHHhhccCchHHHH-HHHHHHHhhhhhhhcchhhhhhcc-CCCchHHHHHHHhHhHhhhhhHHHhHHHhhcccCCchH
Q 021674          205 FFLTQLSHVDSPAMAV-LCMACSQGTDAFSQSGLYSNHQDI-APRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSWDD  282 (309)
Q Consensus       205 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~a~~~~~~~~~lgg~i~~~~~g~l~~~~~~~~  282 (309)
                      +........++.+..+ .....+.+.+ ...+.......+. ++++++.+.++.+...++|..++|.+.+.+.++.+|+.
T Consensus        74 ~~~~~~~~~~~~~~~~~~~~l~g~~~~-~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~~~~~  152 (352)
T PF07690_consen   74 LGSLLLAFASNFWLLLIARFLLGIGSG-FFSPASNALIADWFPPEERGRAFGILSAGFSLGSILGPLLGGFLISYFGWRW  152 (352)
T ss_dssp             HHHHHHHHHCCHHHHHHHHHHHHHHHH-HHHHHHHHHHHHCCCTCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHCHHCC
T ss_pred             hHHHHhhhhhhHHHHhhhccccccccc-cccccccccccccchhhhhhhccccccchhhhhhhcccchhhhhhhcccccc
Confidence            1111111112333222 2222232221 1122222333343 45689999999999999999999999999998888999


Q ss_pred             HHHHHHHHHHHHHHH
Q 021674          283 VFKVSVGLYLVGTAV  297 (309)
Q Consensus       283 ~~~~~~~~~~~~~~~  297 (309)
                      .|.+.+++.+++.+.
T Consensus       153 ~~~~~~~~~~~~~il  167 (352)
T PF07690_consen  153 AFLISAILSLIAAIL  167 (352)
T ss_dssp             HHHHHHHHHHHHHHH
T ss_pred             ccccccchhhhhhhh
Confidence            999888888877664

These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.

>PRK10207 dipeptide/tripeptide permease B; Provisional

Probab=99.31  E-value=1.2e-10  Score=110.04  Aligned_cols=171  Identities=12%  Similarity=0.169  Sum_probs=108.7

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhCCCccchhhHhhhhHHHHHHHHHHHHHHHHH-HHHcCCChhhHHHHHH
Q 021674          118 PPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADT-LVSKGLSVTTVRKIMQ  196 (309)
Q Consensus       118 ~~~~~~~~~~~~~~~~~~~~~~wlp~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~G~l~dr-~~~r~~~~~~~~~~~~  196 (309)
                      +.+|.+....++..+++|++..+++.|+++++|++..+++...........+..+++|+++|| +|||+..       ..
T Consensus        14 ~~~~~~~~~~~~er~~~y~~~~~l~~yl~~~lg~~~~~a~~i~~~~~~~~~~~~~~~G~laDr~~G~r~~~-------~~   86 (489)
T PRK10207         14 RPFFMIFFVELWERFGYYGVQGILAVFFVKQLGFSQEQAFITFGAFAALVYGLISIGGYVGDHLLGTKRTI-------VL   86 (489)
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhhHHHhhhhccchHHHH-------HH
Confidence            446666777777788999999999999999999999999888877777777888899999999 8887421       11


Q ss_pred             HHhhHHHHHHHHHhhccCchHHH-HHHHHHHHhhhhhhhcchhhhhhc-cCCC--chHHHHHHHhHhHhhhhhHHHhHHH
Q 021674          197 SIGFLGPAFFLTQLSHVDSPAMA-VLCMACSQGTDAFSQSGLYSNHQD-IAPR--YSGVLLGLSNTAGVLAGVFGTAATG  272 (309)
Q Consensus       197 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~-~~~~--~~g~a~~~~~~~~~lgg~i~~~~~g  272 (309)
                      ............... .+.+... +.....+.+.+.+ .+...+...| .+++  +++.+.++.+...++|..++|.+.|
T Consensus        87 g~~~~~~g~~~~~~~-~~~~~ll~~~~~l~~ig~g~~-~~~~~~li~~~~p~~~~~~~~~~~~~~~~~nig~~~g~~l~g  164 (489)
T PRK10207         87 GAIVLAIGYFMTGMS-LLKPDLIFIALGTIAVGNGLF-KANPASLLSKCYPPKDPRLDGAFTLFYMSINIGSLISLSLAP  164 (489)
T ss_pred             HHHHHHHHHHHHHHh-ccchhHHHHHHHHHHhccccc-cCCHHHHHHHhcCCCchhhhcchhHHHHHHHHHHHHHHHHHH
Confidence            111111111111111 1112212 1111122222211 1112222222 2333  4577888899999999999999999


Q ss_pred             hhcccCCchHHHHHHHHHHHHHHHH
Q 021674          273 YILQHGSWDDVFKVSVGLYLVGTAV  297 (309)
Q Consensus       273 ~l~~~~~~~~~~~~~~~~~~~~~~~  297 (309)
                      ++.++.+|+..|.+..+..+++.+.
T Consensus       165 ~l~~~~gw~~~F~i~~i~~~~~~~~  189 (489)
T PRK10207        165 VIADKFGYSVTYNLCGAGLIIALLV  189 (489)
T ss_pred             HHHHhhChHHHHHHHHHHHHHHHHH
Confidence            9999988999998865544444433

>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]

Probab=99.31  E-value=7.9e-10  Score=105.46  Aligned_cols=260  Identities=13%  Similarity=0.072  Sum_probs=141.9

Q ss_pred             CCcccccchhhHHHHHhccCCCcchhHHHHHHHhhhhhHHHHhhhhHHHHhhhcCCcchhHhhhhHHHHHHHHHHhhccc
Q 021674            1 MGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVWLSKAHS   80 (309)
Q Consensus         1 ~Gig~g~~~p~~~~~i~~~~p~~~rg~~~g~~~~~~~~g~~lg~~l~~~l~~~~gWr~~F~i~~~~~~v~~~~~~~~~~~   80 (309)
                      +|++.++....+..+++|++++|+|+.++.+ ......++.++++.++++.+  +||+.+++..+++.+.+++ ....+|
T Consensus       181 ~G~~~~~~~~~~~~~~~E~~~~~~R~~~~~~-~~~~~~~~~~~~~~~a~~~~--~Wr~~~~~~~~~~~~~~~~-~~l~~E  256 (521)
T KOG0255|consen  181 SGFFGSGPLTVGFGLVAEIVSPKQRGLALTL-GGFFFVGGLMLPAGAAYITR--DWRWLFWIISIPSGLFLLL-WFLPPE  256 (521)
T ss_pred             HHhhccchhHHhHhhheeecCcchhhHHHHH-HHHHHHHHHHHHHHHHHHHh--hHHHHHHHHHHHHHHHHHH-HHccCc
Confidence            4888999999999999999999999999999 88888999999999999988  8999999988888765433 233457


Q ss_pred             CCCCCC---CCCHHHH---HHHHhc---------------cC-CC--CCCCCCChhHhhcchHHHHHHHHHHHHHHHHHH
Q 021674           81 SPAEDP---QLRPAEK---KLIVSS---------------CA-SK--EPVKTIPWGLILSKPPVWALIVSHFCHNWGTFI  136 (309)
Q Consensus        81 ~p~~~~---~~~~~~~---~~~~~~---------------~~-~~--~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~  136 (309)
                      +|+...   +.++.++   +....+               .. .+  ...++..+.++++.|++........+ .+-.+.
T Consensus       257 s~rwl~~~g~~~~a~~~l~~~a~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~-~~~~~~  335 (521)
T KOG0255|consen  257 SPRWLLSKGRIDEAIKILKKIAKLNGRKLSVKELLRLELLLRPLKLLFTEPKISFLDLFRTPRLRYRTLYLLF-IWFVFS  335 (521)
T ss_pred             ChHHHHHcCchHHHHHHHHHHHhhcCCCCCcHHHHHHHHHhhHhhhhccCCCCchhhhhcCHHHHHHHHHHHH-HHHHHh
Confidence            776321   1111111   110000               00 00  00012335667788764433322222 222333


Q ss_pred             HHHhHHHHHHHHhCCCccchhhHhhhhHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHhhHHH-HHHHHHhhccCc
Q 021674          137 LLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGP-AFFLTQLSHVDS  215 (309)
Q Consensus       137 ~~~wlp~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~  215 (309)
                      +..+.-.+..+..|-+....   ....+..-..+....+...||.|||..        .....+... ..+.......+.
T Consensus       336 ~~y~gl~~~~~~lg~~~~~~---~~~~~~~~~p~~~~~~~~~~~~gR~~~--------~~~~~~~~~~~~~~~~~~~~~~  404 (521)
T KOG0255|consen  336 LVYYGLSLNVSGLGGNIYLN---FTLSGLVELPAYFRNGLLLPEFGRRPP--------LFLSLFLAGIGLLLFGWLPDDL  404 (521)
T ss_pred             HHHHhhhhhhhhcCchHHHH---HHHHHHHHhhHHHHHHHHHHHhCcHHH--------HHHHHHHHHHHHHHHHHhhccc
Confidence            44443334444444443322   222223444555566889999976521        111111111 111111111111


Q ss_pred             h-HHHHHHHHHHHhhhhhhhcchhhhhhccCC-CchHHHHHHHhHhHhhhhhHHHhHHHhhcc
Q 021674          216 P-AMAVLCMACSQGTDAFSQSGLYSNHQDIAP-RYSGVLLGLSNTAGVLAGVFGTAATGYILQ  276 (309)
Q Consensus       216 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~a~~~~~~~~~lgg~i~~~~~g~l~~  276 (309)
                      . .........+.+....+....+....|..| ..|..+.+..+...+++++++|.+.-....
T Consensus       405 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~pt~~r~~~~~~~~~~~~~~~i~ap~~~~~~~~  467 (521)
T KOG0255|consen  405 GGWLHWILPLLGKFFIGSAFNLIFLYSAELIPTVVRNTAVGAISAAARLGSILAPLFPLLLRQ  467 (521)
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence            1 011111111111111112222333344445 469999999999999999999988755433

>PRK09874 drug efflux system protein MdtG; Provisional

Probab=99.31  E-value=2.5e-10  Score=105.09  Aligned_cols=171  Identities=17%  Similarity=0.191  Sum_probs=108.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhCCCccch-----hhHhhhhHHHHHHHHHHHHHHHHHHHHcCCChhhHHH
Q 021674          119 PVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTES-----GLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRK  193 (309)
Q Consensus       119 ~~~~~~~~~~~~~~~~~~~~~wlp~~l~~~~g~s~~~~-----g~~~~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~  193 (309)
                      .+..+....++...+......++|.|+++ +|.+..+.     ++......+...++.++.|+++||++||+.       
T Consensus        15 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~-------   86 (408)
T PRK09874         15 NLTVAWLGCFLTGAAFSLVMPFLPLYVEQ-LGVTGHSALNMWSGLVFSITFLFSAIASPFWGGLADRKGRKIM-------   86 (408)
T ss_pred             HHHHHHHHHHHHHHHHHHhhhhHHHHHHH-hCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhCcHHH-------
Confidence            34445566677777777778899999975 78886653     788888889999999999999999987632       


Q ss_pred             HHHHHhhHHHHHHHHHhhccCchHHHHHH-HHHHHhhhhhhhcchhhh-hhccCCCchHHHHHHHhHhHhhhhhHHHhHH
Q 021674          194 IMQSIGFLGPAFFLTQLSHVDSPAMAVLC-MACSQGTDAFSQSGLYSN-HQDIAPRYSGVLLGLSNTAGVLAGVFGTAAT  271 (309)
Q Consensus       194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~-~~~~~~~~~g~a~~~~~~~~~lgg~i~~~~~  271 (309)
                       +. .+..............++....... ...+.+.+ . .+..... .+..++++++.+.++.+....+|..++|.+.
T Consensus        87 -~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~  162 (408)
T PRK09874         87 -LL-RSALGMGIVMVLMGLAQNIWQFLILRALLGLLGG-F-VPNANALIATQVPRNKSGWALGTLSTGGVSGALLGPLAG  162 (408)
T ss_pred             -HH-HHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhhh-h-HHhHHHHHHHhcCHhhhhHHHHHHHHHHHHHHHHHHHHH
Confidence             11 1111111111111122233222221 22222111 1 1111122 2334567889999999999999999999999


Q ss_pred             HhhcccCCchHHHHHHHHHHHHHHHHHHhh
Q 021674          272 GYILQHGSWDDVFKVSVGLYLVGTAVWNLF  301 (309)
Q Consensus       272 g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~  301 (309)
                      +.+.+..+|+..|.+.+++.+++.+...++
T Consensus       163 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~  192 (408)
T PRK09874        163 GLLADSYGLRPVFFITASVLFLCFLVTLFC  192 (408)
T ss_pred             HHHHHHhCHHHHHHHHHHHHHHHHHHHHHH
Confidence            999988789999888777766665544443

>TIGR00806 rfc RFC reduced folate carrier

Probab=99.30  E-value=1.9e-10  Score=105.78  Aligned_cols=60  Identities=17%  Similarity=0.252  Sum_probs=56.0

Q ss_pred             CcccccchhhHHHHHhccCCCcchhHHHHHHHhhhhhHHHHhhhhHHHHhhhcCCcchhHhh
Q 021674            2 GIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSF   63 (309)
Q Consensus         2 Gig~g~~~p~~~~~i~~~~p~~~rg~~~g~~~~~~~~g~~lg~~l~~~l~~~~gWr~~F~i~   63 (309)
                      |++||+.+ +..+++++|+|++||+++.|++.++..+|.+++++++++ +..+|||+-+.++
T Consensus       126 GvaEA~~~-A~~syI~~WfP~kER~ratsi~~sg~~vG~~Ia~~L~ql-l~s~gWr~y~~Ln  185 (511)
T TIGR00806       126 SVTMAARI-AYSSYIFSLVPPSRYQRAAAYSRAAVLLGVFLSSVLGQL-LVTLGWISYSTLN  185 (511)
T ss_pred             HHHHHHHH-HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHhcCchhHHHHH
Confidence            88999999 999999999999999999999999999999999999999 5678999977653

Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.

>PRK05122 major facilitator superfamily transporter; Provisional

Probab=99.29  E-value=1.1e-10  Score=107.37  Aligned_cols=171  Identities=18%  Similarity=0.160  Sum_probs=108.6

Q ss_pred             chHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhCCCccchhhHhhhhHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHH
Q 021674          117 KPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQ  196 (309)
Q Consensus       117 ~~~~~~~~~~~~~~~~~~~~~~~wlp~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~  196 (309)
                      ++++..+.+..+....+.......+|.++++++|.|..+.|+..+...++..++.++.|+++||+|||+.....      
T Consensus        14 ~~~~~~l~~~~~~~~~~~~~~~~~l~~~i~~~~g~s~~~~g~~~~~~~~~~~i~~~~~G~l~Dr~g~r~~l~~~------   87 (399)
T PRK05122         14 TLRIVSIVMFTFISYLTIGLPLAVLPGYVHDQLGFSAFLAGLVISLQYLATLLSRPHAGRYADTLGPKKAVVFG------   87 (399)
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHhchhhHhHHhccCCcchHHHH------
Confidence            44555566677777777777788999999999999999999999999999999999999999999987532110      


Q ss_pred             HHhhHHHHHHHHHhhccCc-----hHHHHHH-HHHHHhhhhhhhcchhhhh-hccCCCchHHHHHHHhHhHhhhhhHHHh
Q 021674          197 SIGFLGPAFFLTQLSHVDS-----PAMAVLC-MACSQGTDAFSQSGLYSNH-QDIAPRYSGVLLGLSNTAGVLAGVFGTA  269 (309)
Q Consensus       197 ~~~~~~~~~~~~~~~~~~~-----~~~~~~~-~~~~~~~~~~~~~~~~~~~-~~~~~~~~g~a~~~~~~~~~lgg~i~~~  269 (309)
                      .................++     ....+.. ...+.+.+.. ........ ...++++++.+.++.+...++|..++|.
T Consensus        88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~-~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~  166 (399)
T PRK05122         88 LCGCALSGLLYLLAGLLAAWPVLSLLLLLLGRLLLGIGESLA-GTGSILWGIGRVGALHTGRVISWNGIATYGALAIGAP  166 (399)
T ss_pred             HHHHHHHHHHHHHhhhhhccchhHHHHHHHHHHHHHhhHHhh-cchHHHHHHhhcChhhhccchhhhhhhhhHHHHHHHH
Confidence            0111111111111111111     1111111 1222222111 12122222 2345678899999888888888899999


Q ss_pred             HHHhhcccCCchHHHHHHHHHHHHH
Q 021674          270 ATGYILQHGSWDDVFKVSVGLYLVG  294 (309)
Q Consensus       270 ~~g~l~~~~~~~~~~~~~~~~~~~~  294 (309)
                      +.+.+.++.+|+..+.+...+.++.
T Consensus       167 l~~~l~~~~g~~~~~~~~~~~~~~~  191 (399)
T PRK05122        167 LGVLLYHWGGLAGLGLLIMLLALLG  191 (399)
T ss_pred             HHHHHHHcccHHHHHHHHHHHHHHH
Confidence            9999998888988776655544433

>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]

Probab=99.28  E-value=7.2e-11  Score=104.24  Aligned_cols=260  Identities=17%  Similarity=0.134  Sum_probs=135.5

Q ss_pred             chhhHHHHHhccCCCcchhHHHHHHHhhhhhHHHHhhhhHHHHhh---hcCCcchhHhhh----hHHHHHHHHHHhhccc
Q 021674            8 AMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIH---RFGWPSVFYSFG----SLGTVWFTVWLSKAHS   80 (309)
Q Consensus         8 ~~p~~~~~i~~~~p~~~rg~~~g~~~~~~~~g~~lg~~l~~~l~~---~~gWr~~F~i~~----~~~~v~~~~~~~~~~~   80 (309)
                      ....+.++++|.+++|+|++.++.++...++|-++||.+|+++.+   ..| +..|....    +++..-.....++.+|
T Consensus       137 nl~v~rAiisdV~sek~r~l~ms~v~~a~~lGfilGPmIGgyla~f~~~~g-~~p~alP~~~v~i~a~~~v~~~~~~lpE  215 (451)
T KOG2615|consen  137 NLSVIRAIISDVVSEKYRPLGMSLVGTAFGLGFILGPMIGGYLAQFSSISG-SYPFALPCLLVFILAAGDVTFFPWFLPE  215 (451)
T ss_pred             chHHHHHHHHhhcChhhccceeeeeehhhhcchhhcchhhhHHHhhHhhhc-cCchHHHHHHHHHHHHHHHHHHHHhCCc
Confidence            345677899999999999999999999999999999999999988   222 22232211    1121101122223344


Q ss_pred             CCCCCCCCCHHHHHHHHhccCCCCCCCCCCh---hHhhcchHH------HHHHHHHHHHHHHHHHHHHhHHHHH-HHHhC
Q 021674           81 SPAEDPQLRPAEKKLIVSSCASKEPVKTIPW---GLILSKPPV------WALIVSHFCHNWGTFILLTWMPTYY-NQVLH  150 (309)
Q Consensus        81 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~l~~~~~~------~~~~~~~~~~~~~~~~~~~wlp~~l-~~~~g  150 (309)
                      .-+.+++.  +|....++...+++...+.++   -..+||++.      |..+....+.+.-.|......+.++ .+.+|
T Consensus       216 TL~~rk~~--~~~~~~~~~~~~~~~~~~~~~~~~v~~lrn~p~~~~i~~~~i~~l~~~ly~~l~s~~~~t~~~l~~~rfg  293 (451)
T KOG2615|consen  216 TLPLRKRN--DEHSTLQEAADDRLALLKFARIFKVAALRNPPLLDFISVLRIFGLHYFLYLELFSGLENTVLFLTHGRFG  293 (451)
T ss_pred             cccchhhc--ccccchhhhhhhhhhhcchhhhhhhhhhcCccccchHHHHHHHHHHHHHHHHHHHHHHhhHHHhhcCccC
Confidence            32221111  110000000000000001110   123455432      2222222222223344444444444 67889


Q ss_pred             CCccchhhHhhhhHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHhhHHHHHHHHHhhccCchHHHHHHHHHHHhhh
Q 021674          151 FNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSPAMAVLCMACSQGTD  230 (309)
Q Consensus       151 ~s~~~~g~~~~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  230 (309)
                      +++.+.|.+.+..++.+.+....-....||.+.    ... .........+..++.+..  ....+....+....-....
T Consensus       294 ~ss~~~G~vl~~tGl~m~~~ql~~~~~l~~~~~----~~~-a~l~~~l~~~vP~~llls--~~~~~~~l~~~s~l~sf~~  366 (451)
T KOG2615|consen  294 YSSMQQGKVLSTTGLLMLVIQLALVPILPRYKG----NIK-AVLLFSLLLIVPAFLLLS--LARTPVVLYLGSTLKSFST  366 (451)
T ss_pred             CChhhheeeeehhhHHHHHHHHhcccccccccc----chh-hHHHHHHHHHHHHHHHHh--ccccchhhhHHHHHHHHHH
Confidence            999999999988877776665555555555431    111 111112222334443333  2222322211111111112


Q ss_pred             hhhhcchhhhhhcc-CCCchHHHHHHHhHhHhhhhhHHHhHHHhhccc
Q 021674          231 AFSQSGLYSNHQDI-APRYSGVLLGLSNTAGVLAGVFGTAATGYILQH  277 (309)
Q Consensus       231 ~~~~~~~~~~~~~~-~~~~~g~a~~~~~~~~~lgg~i~~~~~g~l~~~  277 (309)
                      +...+.+....+.. +++++|++.|+....+.++=++||.+.|.+..+
T Consensus       367 A~~vt~Lt~Lv~~~~~~~qrG~~~Gi~~Sl~alaRaiGPlv~g~i~~W  414 (451)
T KOG2615|consen  367 ASVVTCLTSLVHKYGPQSQRGTLNGIFRSLGALARAIGPLVSGVIFSW  414 (451)
T ss_pred             HHhhHHHHHHHHhcCCcccchHHHHHHHHHHHHHHHhhhhhhheeEEE
Confidence            22233344433333 456899999999999999999999999999887

>PRK10489 enterobactin exporter EntS; Provisional

Probab=99.28  E-value=8.8e-11  Score=108.75  Aligned_cols=185  Identities=16%  Similarity=0.135  Sum_probs=117.7

Q ss_pred             CChhHhhcchHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhCCCccchhhHhhhhHHHHHHHHHHHHHHHHHHHHcCCCh
Q 021674          109 IPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSV  188 (309)
Q Consensus       109 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~wlp~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~G~l~dr~~~r~~~~  188 (309)
                      .|++.+.|+|.++......++...+.......+|.+.++ .+.|+.+.|+......++..++.++.|+++||++||+...
T Consensus         8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~s~~~~g~~~~~~~l~~~~~~~~~G~l~dr~g~~~~l~   86 (417)
T PRK10489          8 LDLSLLKTHPAFRAVFIARFISIFGLGLLGVAVPVQIQM-MTGSTLQVGLSVTLTGGAMFIGLMVGGVLADRYDRKKLIL   86 (417)
T ss_pred             HHHHHHHhCCChhhHHHHHHHHHHHHHHHHHHHHHHHHH-HHCCHHHHHHHHHHHHHHHHHHHHhhHHHhhhcCCceEEE
Confidence            355666678888777777777777776777788888766 5779999999999999999999999999999999875432


Q ss_pred             hhHHHHHHHHhhHHHHHHHHHhhccCchHHHHH-HHHHHHhhhhhhhcchhhhhh-ccCCCchHHHHHHHhHhHhhhhhH
Q 021674          189 TTVRKIMQSIGFLGPAFFLTQLSHVDSPAMAVL-CMACSQGTDAFSQSGLYSNHQ-DIAPRYSGVLLGLSNTAGVLAGVF  266 (309)
Q Consensus       189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~a~~~~~~~~~lgg~i  266 (309)
                      ..  ..+...+.....  .......++...... ....+.+.+ ...+....... ..++++++.+.++.+...++|..+
T Consensus        87 ~~--~~~~~~~~~~~~--~~~~~~~~~~~~l~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~  161 (417)
T PRK10489         87 LA--RGTCGLGFIGLA--LNAFLPEPSLLAIYLLGLWDGFFGS-LGVTALLAATPALVGRENLMQAGAITMLTVRLGSVI  161 (417)
T ss_pred             eh--HHHHHHHHHHHH--HHHHcCCCcHHHHHHHHHHHHHHHH-HHHHHHhhhhhhccCHHHHHHHHHHHHHHHhHHHHh
Confidence            21  111111111110  001111222222221 111222211 11122222222 334567899999999999999999


Q ss_pred             HHhHHHhhcccCCchHHHHHHHHHHHHHHHHHH
Q 021674          267 GTAATGYILQHGSWDDVFKVSVGLYLVGTAVWN  299 (309)
Q Consensus       267 ~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~  299 (309)
                      +|.+.|.+.+..+|+..|.+.+...+++.+...
T Consensus       162 g~~l~g~l~~~~~~~~~~~~~~~~~~~~~~~~~  194 (417)
T PRK10489        162 SPALGGLLIAAGGVAWNYGLAAAGTFITLLPLL  194 (417)
T ss_pred             HHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHH
Confidence            999999999887888888877666665554433

>TIGR00899 2A0120 sugar efflux transporter

Probab=99.28  E-value=1.9e-10  Score=104.56  Aligned_cols=167  Identities=10%  Similarity=0.007  Sum_probs=104.0

Q ss_pred             HHHHHHHHHHHHHHHhHHHHHHHHhCCCccchhhHhhhhHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHhhHHHH
Q 021674          125 VSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPA  204 (309)
Q Consensus       125 ~~~~~~~~~~~~~~~wlp~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~~~~~~~~  204 (309)
                      +.+++...+.......+|.|+++++|.|..+.|++.+...+...+..++.|+++||+|||+.        +...+.....
T Consensus         4 ~~~~~~~~~~~~~~~~l~~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~--------~~~~~~~~~~   75 (375)
T TIGR00899         4 LVAFLTGIAGALQFPTLSLFLSEEVRARPAMIGLFYTGSAIVGIAVSQLLATRSDYQGDRKG--------LILFCCLLAA   75 (375)
T ss_pred             HHHHHHHHHHHHHhhHHHHHHHcccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchH--------HHHHHHHHHH
Confidence            44566667777788899999999999999999999999999999999999999999987641        1111111111


Q ss_pred             HHHHHhhccCchHHHHHH-HHHHHhhhhhhhcchhhhhhcc-CCCchHHH--HHHHhHhHhhhhhHHHhHHHhhcccCCc
Q 021674          205 FFLTQLSHVDSPAMAVLC-MACSQGTDAFSQSGLYSNHQDI-APRYSGVL--LGLSNTAGVLAGVFGTAATGYILQHGSW  280 (309)
Q Consensus       205 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~a--~~~~~~~~~lgg~i~~~~~g~l~~~~~~  280 (309)
                      .........++....+.. ...+.... ...+.......+. +++.++.+  .+..+...++|..++|.+.+.+.+..+|
T Consensus        76 ~~~~~~~~~~~~~~l~~~~~~~g~~~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ig~~~~~~l~~~~~~  154 (375)
T TIGR00899        76 LACLLFAWNRNYFLLLVLGVLLSSFAS-TANPQLFALAREHADRTGREAVMFSSVMRAQISLAWVIGPPLAFWLALGFGF  154 (375)
T ss_pred             HHHHHHHhcchHHHHHHHHHHHHhhhh-hhHHHHHHHHHHHhhhcchhhHHHHHHHHHHHhHHHHHhhhHHHHHHHhccc
Confidence            111111222333222211 11111111 1111112222222 23334433  5667777889999999999999988889


Q ss_pred             hHHHHHHHHHHHHHHHHHHh
Q 021674          281 DDVFKVSVGLYLVGTAVWNL  300 (309)
Q Consensus       281 ~~~~~~~~~~~~~~~~~~~~  300 (309)
                      +..|.+.+.+.++..+...+
T Consensus       155 ~~~f~~~~~~~~~~~~~~~~  174 (375)
T TIGR00899       155 TVMFLTAALAFVLCGVLVWL  174 (375)
T ss_pred             HHHHHHHHHHHHHHHHHHHH
Confidence            99999887776665544444

This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.

>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter

Probab=99.27  E-value=9.8e-10  Score=102.71  Aligned_cols=291  Identities=15%  Similarity=0.112  Sum_probs=152.7

Q ss_pred             cchhhHHHHHhccCCCcch--hHHHHHHHhhhhhHHHHhhhhHHHH--hhhc-------------CCcchhHhhhhHHHH
Q 021674            7 VAMPAMNNILSKWVPVAER--SRSLALVYSGMYLGSVTGLAFSPFL--IHRF-------------GWPSVFYSFGSLGTV   69 (309)
Q Consensus         7 ~~~p~~~~~i~~~~p~~~r--g~~~g~~~~~~~~g~~lg~~l~~~l--~~~~-------------gWr~~F~i~~~~~~v   69 (309)
                      ...+...++++|.+|+++|  +++.++.+...++|+++|+.+++.+  .+.+             +-|..|++.+++-++
T Consensus       130 ~~~~p~rALiaDl~p~~~~~~~~a~~~~~~~~~lG~ilg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~F~i~a~~l~i  209 (477)
T TIGR01301       130 MLQGPCRAFLADLTGGDARRTRIANAYFSFFMAIGNVLGYAAGAYSGLYKIFPFTKTEACGVSCANLKSCFLIDIILLAI  209 (477)
T ss_pred             HHHHHHHHhcccccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHhcccccccccccccchHHHHHHHHHHHHHH
Confidence            3456677899999998865  6899999999999999999999875  2322             457888875554444


Q ss_pred             HHHHHHhhcccCCCCCCCCCHHHHHHHHhccCCCCCCCCCChhHhh----cc-hHHHHHHHHHHHHHHHHHHHHHhHHHH
Q 021674           70 WFTVWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLIL----SK-PPVWALIVSHFCHNWGTFILLTWMPTY  144 (309)
Q Consensus        70 ~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~----~~-~~~~~~~~~~~~~~~~~~~~~~wlp~~  144 (309)
                      ...+.....+|+|..+++-.++++ .  ++  .++......+++++    +- |.+|.+....++.-.+.+.+..+.+.|
T Consensus       210 ~~l~t~~~v~E~~~~~~~~~~~~~-~--~~--~~~~~~~~~~~~i~~~~~~mP~~m~~l~~vqffsW~a~f~~~~y~T~~  284 (477)
T TIGR01301       210 LTYIALSAVKENPLIGSDDFINSE-A--AP--PSKHGEEAFFGELFGAFKYLPRPVWILLLVTCLNWIAWFPFILFDTDW  284 (477)
T ss_pred             HHHHHeeeeeccCCCccccchhhh-c--cc--ccccchhhhHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHhccHH
Confidence            333334445665432111000000 0  00  00000011223332    22 567888888999888999999999999


Q ss_pred             HH-HHhCCCccch---------hhH-hhhhHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHhhHHHHHHHHHhhc-
Q 021674          145 YN-QVLHFNLTES---------GLF-CVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSH-  212 (309)
Q Consensus       145 l~-~~~g~s~~~~---------g~~-~~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~-  212 (309)
                      .- +.++-++.+.         |.. .....+...+.+++--++.+|+|+|+. .+.....+..+++. ...+...... 
T Consensus       285 vg~~v~~~~~~~~~~y~~gvr~G~~~l~~~s~~~~i~s~~l~~l~~~~g~~k~-~~~~s~~~~~~~l~-~~~~i~~~~~~  362 (477)
T TIGR01301       285 MGREVYGGSVNQGAKYDDGVRAGAFGLMLNSVVLGITSIGMEKLCRGWGAGKR-LWGIVNIILAICLA-ATVLVTYVAKN  362 (477)
T ss_pred             HHHHHcCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchh-HHHHHHHHHHHHHH-HHHHHHhhhhc
Confidence            86 4555443221         222 233334444555566666777764321 11101011111111 1111111000 


Q ss_pred             --c---------Cch--HHHHHHHHHHHhhh-hhhhcchhhhh-hccC--CCchHHHHHHHhHhHhhhhhHHHhHHHhhc
Q 021674          213 --V---------DSP--AMAVLCMACSQGTD-AFSQSGLYSNH-QDIA--PRYSGVLLGLSNTAGVLAGVFGTAATGYIL  275 (309)
Q Consensus       213 --~---------~~~--~~~~~~~~~~~~~~-~~~~~~~~~~~-~~~~--~~~~g~a~~~~~~~~~lgg~i~~~~~g~l~  275 (309)
                        .         .+.  ....+......|.. +...+.=|+.. ++.+  .+..|.-+|+.|....+.+.+.....|.+.
T Consensus       363 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~Gi~~A~~~siPfal~s~~~~~~~~~~G~~mgilN~~I~lpQii~sl~~g~~~  442 (477)
T TIGR01301       363 SRYYDGDGESLPPPTGIKASALIVFAILGIPLAITYSIPFALASIRSSNLGAGQGLSMGVLNLAIVIPQIIVSLGSGPWD  442 (477)
T ss_pred             cccccccccccCcchhhHHHHHHHHHHhhHHHHHHHHHhHHHHHHHccccCCCCcchhhHHHHHHHHHHHHHHHHHHHHH
Confidence              0         000  12222221222221 11111112221 2222  356799999999999999998888888854


Q ss_pred             cc-C-CchHHHHHHHHHHHHHHHHHHhhcCC
Q 021674          276 QH-G-SWDDVFKVSVGLYLVGTAVWNLFSTG  304 (309)
Q Consensus       276 ~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~  304 (309)
                      +. + +....+.++++..+++++...+...|
T Consensus       443 ~~~g~~~~~~~~~~gv~~~~aa~~~~~~~~~  473 (477)
T TIGR01301       443 QLFGGGNLPAFVVGAVAAFVSGLLALILLPR  473 (477)
T ss_pred             HHcCCCCeeHHHHHHHHHHHHHHHHHHhCCC
Confidence            44 2 34556666777777776555554433

This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.

>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]

Probab=99.27  E-value=8.1e-10  Score=101.73  Aligned_cols=247  Identities=14%  Similarity=0.088  Sum_probs=154.2

Q ss_pred             HHHhccC-CCcchhHHHHHHHhhhhhHHHHhhhhHHHHhh-------hcCCcchhHhhhhHHHHHHHHHHhhcccCCCCC
Q 021674           14 NILSKWV-PVAERSRSLALVYSGMYLGSVTGLAFSPFLIH-------RFGWPSVFYSFGSLGTVWFTVWLSKAHSSPAED   85 (309)
Q Consensus        14 ~~i~~~~-p~~~rg~~~g~~~~~~~~g~~lg~~l~~~l~~-------~~gWr~~F~i~~~~~~v~~~~~~~~~~~~p~~~   85 (309)
                      ++.++.- +++||.+-.++-+...++|..+...+-+.++.       ..|||..-.+.++++.+..+..++..+|++.+.
T Consensus       135 al~~~iT~d~~ER~~l~s~R~~~~~~g~~l~~~~~~plv~~~g~~~~~~g~~~~~~~~~vi~~i~~l~~~~~v~ER~~~~  214 (467)
T COG2211         135 ALGPEITQDPQERASLTSWRMVFASLGGLLVAVLFPPLVKLFGGGDKALGYQGTALVLGVIGVILLLFCFFNVKERVVET  214 (467)
T ss_pred             hcchhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcchhhHHHHHHHHHHHHHHHHHHHHHHhhcccCcc
Confidence            4455555 58999999999999999998877655544443       358888888888888877666666666654322


Q ss_pred             CCCCHHHHHHHHhccCCCCCCCCCChhHhhcchHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhCCCccchhhHhhhhHH
Q 021674           86 PQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWL  165 (309)
Q Consensus        86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~wlp~~l~~~~g~s~~~~g~~~~~~~~  165 (309)
                      ...++           +.+.+.+.++..++||+++..+.+.+++...+..-..+..+-|.+..+|.+..+....+.....
T Consensus       215 ~~~~~-----------~~~~~~~~~~~~~~~Nrp~~~~l~~~l~~~~~~~i~~s~~~yy~~y~lg~~~l~~~~~~~~~~~  283 (467)
T COG2211         215 QPTKT-----------GVKLKLKDSFLLIFKNRPLLLLLLMNLLLFIAFNIRGSIMVYYVTYVLGDPELFAYLLLLASGA  283 (467)
T ss_pred             ccCcc-----------cccccHHHHHHHHHccchHHHHHHHHHHHHHHHHHHhhhhheeEEEEcCChHHHHHHHHHHHHH
Confidence            11000           0001001123467899998888877777766666666777788888888888888888877777


Q ss_pred             HHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHhhHHHHHHHHHhhccCchHHHHHHHHH-HHhhhhhhhcchhhhhh--
Q 021674          166 TMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSPAMAVLCMAC-SQGTDAFSQSGLYSNHQ--  242 (309)
Q Consensus       166 ~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~--  242 (309)
                      +..++.++..++++|+|+|+.....     ..+..+.. ..+... ..++....++..+. +.+.+. .....++...  
T Consensus       284 ~~l~~~~~~p~L~~~~gkk~~~~~~-----~~~~~i~~-~~~~f~-~~~~~~l~~~~~~i~~~g~~~-~~~l~wam~~d~  355 (467)
T COG2211         284 GLLIGLILWPRLVKKFGKKKLFLIG-----LLLLAVGY-LLLYFT-PAGSVVLIVVALIIAGVGTGI-ANPLPWAMVADT  355 (467)
T ss_pred             HHHHHHHhHHHHHHHhchHHHHHHH-----HHHHHHHH-HHHHhh-cCcchHHHHHHHHHHHHHhhc-cccccHHHhcch
Confidence            7778899999999999987422111     01111111 111111 12223233222222 222221 1111122211  


Q ss_pred             ----cc--CCCchHHHHHHHhHhHhhhhhHHHhHHHhhcccCC
Q 021674          243 ----DI--APRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGS  279 (309)
Q Consensus       243 ----~~--~~~~~g~a~~~~~~~~~lgg~i~~~~~g~l~~~~~  279 (309)
                          |.  ..+..|...+.+++.+.+|.+++..+.|++++..|
T Consensus       356 vDyge~~TG~R~eGi~~s~~tF~~K~g~ala~~~~g~~L~~~G  398 (467)
T COG2211         356 VDYGEWKTGVRREGIVYSGMTFFRKLGLALAGFIPGWILGAIG  398 (467)
T ss_pred             hhHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence                22  23456999999999999999999999999987643

>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator)

Probab=99.26  E-value=3.2e-10  Score=102.72  Aligned_cols=154  Identities=16%  Similarity=0.133  Sum_probs=98.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhHHHHHHHHhCCCccchhhHhhhhHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHh
Q 021674          120 VWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIG  199 (309)
Q Consensus       120 ~~~~~~~~~~~~~~~~~~~~wlp~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~~~  199 (309)
                      +|.....++......+....++|.++++++|+|..+.+++.....++..++.++.|+++||+|+|+..        . .+
T Consensus         3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~--------~-~~   73 (366)
T TIGR00886         3 LFFSWFGFFLSFSVWFAFSPLAVQMIKDDLGLSTAQLGNLVAVPVLAGAVLRIILGFLVDKFGPRYTT--------T-LS   73 (366)
T ss_pred             hHHHHHHHHHHHHHHHHhHHhhhHHHHHHhCCCHHHhhHhhHHHHHHHHHHHHHHHHHHHHhCchHHH--------H-HH
Confidence            45566666776777888889999989999999999999999999999999999999999999976421        1 11


Q ss_pred             hHHHHHHHHHhhccC-chHHHHH-HHHHHHhhhhhhhcchhhhhhc-cCCCchHHHHHHHhHhHhhhhhHHHhHHHhhcc
Q 021674          200 FLGPAFFLTQLSHVD-SPAMAVL-CMACSQGTDAFSQSGLYSNHQD-IAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQ  276 (309)
Q Consensus       200 ~~~~~~~~~~~~~~~-~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-~~~~~~g~a~~~~~~~~~lgg~i~~~~~g~l~~  276 (309)
                      .+...+........+ +...... -...+.+.+..  ........+ .++++|+.+.++.+...++|..+++.+.+.+.+
T Consensus        74 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~~~~--~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~  151 (366)
T TIGR00886        74 LLLLAIPCLWAGLAVQSYSVLLLLRLFIGIAGGSF--ASCMPWISFFFPKKIQGTALGLAAGWGNMGGGVAQFVMPPIIG  151 (366)
T ss_pred             HHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhchhh--HhHHHHHHHhcCHhhhhHHHHHHHHHhHHHHHHHHHHHHHHHH
Confidence            111111111111222 2322222 12222221111  111222233 355789999999887788888777777666554


Q ss_pred             ----------cCCchHHH
Q 021674          277 ----------HGSWDDVF  284 (309)
Q Consensus       277 ----------~~~~~~~~  284 (309)
                                +.+|+..|
T Consensus       152 ~~~~~~~~~~~~~w~~~~  169 (366)
T TIGR00886       152 SLIFGAGLPAHLAWGWAF  169 (366)
T ss_pred             HHHhcccccccccccchh
Confidence                      23688877

>PRK11043 putative transporter; Provisional

Probab=99.26  E-value=4.9e-10  Score=103.13  Aligned_cols=165  Identities=13%  Similarity=0.058  Sum_probs=103.0

Q ss_pred             HHHHHHHHHHHHHhHHHH--HHHHhCCCccchhhHhhhhHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHhhHHHH
Q 021674          127 HFCHNWGTFILLTWMPTY--YNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPA  204 (309)
Q Consensus       127 ~~~~~~~~~~~~~wlp~~--l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~~~~~~~~  204 (309)
                      ....+.++++...++|.+  +++++|.|..+.++..+...++..++.++.|+++||++||+..        . .+.....
T Consensus        12 ~~~~~~~~~~~~~~~p~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~--------~-~~~~~~~   82 (401)
T PRK11043         12 AGLSMLGFLATDMYLPAFKAIQADLQTSASAVSASLSLFLAGFALGQLLWGPLSDRYGRKPVL--------L-AGLSLFA   82 (401)
T ss_pred             HHHHHHHHHHHHHHHhhHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHhhhhHHhhcCCcHHH--------H-HHHHHHH
Confidence            333444556666777766  6778899999999999999999999999999999999977421        1 1111111


Q ss_pred             HHHHHhhccCchHHHHH-HHHHHHhhhhhhhcchhhhh-hccCCCchHHHHHHHhHhHhhhhhHHHhHHHhhcccCCchH
Q 021674          205 FFLTQLSHVDSPAMAVL-CMACSQGTDAFSQSGLYSNH-QDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSWDD  282 (309)
Q Consensus       205 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~-~~~~~~~~g~a~~~~~~~~~lgg~i~~~~~g~l~~~~~~~~  282 (309)
                      +........++...... ....+.+.+... ....... +..++++++.+.+..+....+++.++|.+.+++.++.+|+.
T Consensus        83 ~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~g~~~  161 (401)
T PRK11043         83 LGSLGMLWVESAAQLLVLRFVQAVGVCSAA-VIWQALVIDRYPAQKANRVFATIMPLVALSPALAPLLGAWLLNHFGWQA  161 (401)
T ss_pred             HHHHHHHHhcCHHHHHHHHHHHHhhhHHHH-HHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChHH
Confidence            11111112233332222 122222211111 1111122 23445567778888888889999999999999999888999


Q ss_pred             HHHHHHHHHHHHHHHHHhh
Q 021674          283 VFKVSVGLYLVGTAVWNLF  301 (309)
Q Consensus       283 ~~~~~~~~~~~~~~~~~~~  301 (309)
                      .|.+...+.++..+....+
T Consensus       162 ~~~~~~~~~~~~~~~~~~~  180 (401)
T PRK11043        162 IFATLFAITLLLILPTLRL  180 (401)
T ss_pred             HHHHHHHHHHHHHHHHHHc
Confidence            8887776666555444433

>PLN00028 nitrate transmembrane transporter; Provisional

Probab=99.26  E-value=5e-10  Score=105.66  Aligned_cols=178  Identities=15%  Similarity=0.061  Sum_probs=101.5

Q ss_pred             hcchHHHHHHHHHHHHHHHHHHHHHhHHH--HHHHHhCCCccchhhHhhhhHHHHHHHHHHHHHHHHHHHHcCCChhhHH
Q 021674          115 LSKPPVWALIVSHFCHNWGTFILLTWMPT--YYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVR  192 (309)
Q Consensus       115 ~~~~~~~~~~~~~~~~~~~~~~~~~wlp~--~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~  192 (309)
                      +++++.+.............+....|.|.  .+++++|+|..+.+.......++..++.++.|+++||+|+|+.      
T Consensus        30 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gls~~~~g~~~~~~~~~~~~~~~~~G~l~dr~G~r~~------  103 (476)
T PLN00028         30 FARPHMRAFHLSWISFFTCFVSTFAAAPLLPIIRDNLNLTKSDIGNAGIASVSGSIFSRLAMGPVCDLYGPRYG------  103 (476)
T ss_pred             CCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHH------
Confidence            45555444433333222233333344442  4567799999999998888888999999999999999997631      


Q ss_pred             HHHHHHhhHHHHHHHHHhhccCchHHHHH-HHHHHHhhhhhhhcchhhhhhccCCCchHHHHHHHhHhHhhhhhHHHhHH
Q 021674          193 KIMQSIGFLGPAFFLTQLSHVDSPAMAVL-CMACSQGTDAFSQSGLYSNHQDIAPRYSGVLLGLSNTAGVLAGVFGTAAT  271 (309)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~a~~~~~~~~~lgg~i~~~~~  271 (309)
                        + ..+.+...+........++...... .+..+++.+... ..........++++||.+.++.+..+++|+.+++.+.
T Consensus       104 --~-~~~~~~~~~~~~~~~~~~s~~~l~~~r~l~G~~~~~~~-~~~~~i~~~~~~~~rg~a~g~~~~~~~~g~~~~~~~~  179 (476)
T PLN00028        104 --S-AFLLMLTAPAVFCMSLVSSATGFIAVRFFIGFSLATFV-SCQYWMSTMFNGKIVGTANGIAAGWGNLGGGVTQLLM  179 (476)
T ss_pred             --H-HHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhhH-HHHHHHHHhcChhheeHHHHHHHHHHHHHHHHHHHHH
Confidence              1 1111111111111122233332222 222233222211 1111112224557899999999988888888887666


Q ss_pred             Hhhcc----c-----CCchHHHHHHHHHHHHHHHHHHhhc
Q 021674          272 GYILQ----H-----GSWDDVFKVSVGLYLVGTAVWNLFS  302 (309)
Q Consensus       272 g~l~~----~-----~~~~~~~~~~~~~~~~~~~~~~~~~  302 (309)
                      +.+.+    .     .+|+..|.+.+++.++..+...++.
T Consensus       180 ~~i~~~~~~~~~~~~~gWr~~f~i~g~l~l~~~l~~~~~~  219 (476)
T PLN00028        180 PLVFPLIKDAGAPSFTAWRIAFFVPGLLHIIMGILVLTLG  219 (476)
T ss_pred             HHHHHHHHhcCCcchhhhHHHHHHHHHHHHHHHHHHHHHc
Confidence            55432    1     3799999987777766655555443

>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs)

Probab=99.25  E-value=9.7e-13  Score=124.92  Aligned_cols=185  Identities=17%  Similarity=0.248  Sum_probs=2.8

Q ss_pred             CCcccccchhhHHHHHhccCCCcchhHHHHHHHhhhhhHHHHhhhhHHHHhhhc------------------C----Ccc
Q 021674            1 MGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRF------------------G----WPS   58 (309)
Q Consensus         1 ~Gig~g~~~p~~~~~i~~~~p~~~rg~~~g~~~~~~~~g~~lg~~l~~~l~~~~------------------g----Wr~   58 (309)
                      .|+|+...++...+++-|..++|+-+.++|++.+...+|+++|..+++.....+                  .    |=.
T Consensus       151 ~GiG~~pl~tLG~tYiDDnv~~~~splYiGi~~~~~~lGPa~Gf~lg~~~L~~yvD~~~~~~~~~~i~p~dp~WvGAWWL  230 (539)
T PF03137_consen  151 IGIGATPLYTLGITYIDDNVSKKNSPLYIGILYAMSILGPALGFLLGSFCLRIYVDFPKVPPDGVGITPSDPRWVGAWWL  230 (539)
T ss_dssp             -SSS----------------------------------------------------------------------------
T ss_pred             HhccccCCccceeeeeccccccccCccchhhhhHHhhccHHHHHHHHHHHHhceeCCccccccCCCCCCCCccHHHHHHH
Confidence            489999999999999999999999999999999999999999999988765422                  1    444


Q ss_pred             hhHhhhhHHHHHHHHHHhhcccCCCCC--CC-CCHHHHH---HHHhccCCCCC-------CC--CCChhHhhcchHHHHH
Q 021674           59 VFYSFGSLGTVWFTVWLSKAHSSPAED--PQ-LRPAEKK---LIVSSCASKEP-------VK--TIPWGLILSKPPVWAL  123 (309)
Q Consensus        59 ~F~i~~~~~~v~~~~~~~~~~~~p~~~--~~-~~~~~~~---~~~~~~~~~~~-------~~--~~~~~~l~~~~~~~~~  123 (309)
                      -|++.+.+.++..+.++.+.++.|+++  ++ .+.++++   ...++..+++.       .+  ....++++|||.+...
T Consensus       231 Gfli~g~~~~l~aipl~~FPk~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~df~~~l~~Ll~Np~f~~~  310 (539)
T PF03137_consen  231 GFLICGILLFLSAIPLFFFPKKLPGTSERQEEKESSERKEEDSDKDSFKDPKSKKSFGKSIKDFPKALKRLLTNPVFMCL  310 (539)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             HHHHHHHHHHHHHHHHHcCCccCCCcccccchhhhhhcchhhhhhhcccccccccchhhhhhhHHHHHHHHhcChHHHHH
Confidence            455555555544332222222222220  00 0000000   00000000000       00  1124678999998887


Q ss_pred             HHHHHHHHHHHHHHHHhHHHHHHHHhCCCccchhhHhhhhHH-HHHHHHHHHHHHHHHHHHcC
Q 021674          124 IVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWL-TMAFSANLGGWIADTLVSKG  185 (309)
Q Consensus       124 ~~~~~~~~~~~~~~~~wlp~~l~~~~g~s~~~~g~~~~~~~~-~~~ig~~~~G~l~dr~~~r~  185 (309)
                      .+...+.....-++.+++|.|+++.++.+++++.++.....+ ++.+|.+++|++..|++-+.
T Consensus       311 ~la~~~~~~~~~G~~tF~pKylE~QF~~sas~A~~l~G~v~ip~~~~G~llGG~ivkk~kl~~  373 (539)
T PF03137_consen  311 ILAGVFESFIVSGFATFLPKYLESQFGLSASQASLLTGIVSIPGAALGILLGGYIVKKFKLSA  373 (539)
T ss_dssp             ---------------------------------------------------------------
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHhhhhcchhheehheEEEEEEEecCcH
Confidence            777777777888999999999999999999999998865554 67799999999999986543

Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.

>TIGR00788 fbt folate/biopterin transporter

Probab=99.25  E-value=7.8e-11  Score=110.79  Aligned_cols=261  Identities=8%  Similarity=-0.041  Sum_probs=136.0

Q ss_pred             cccchhhHHHHHhccCCCcchhH---HHHHHHhhhhhHHHHhhhhHHHHhhhcCCcchhHhhhhHHHHHHHHHHhhcccC
Q 021674            5 EGVAMPAMNNILSKWVPVAERSR---SLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVWLSKAHSS   81 (309)
Q Consensus         5 ~g~~~p~~~~~i~~~~p~~~rg~---~~g~~~~~~~~g~~lg~~l~~~l~~~~gWr~~F~i~~~~~~v~~~~~~~~~~~~   81 (309)
                      .+..-+++-.+..|..+ |++..   .+++.....++|.++|+.+++.+.+.++||..|++.+.+.++..... ...+|+
T Consensus       134 ~a~~dv~~da~~~e~~~-~~~~~~~~~~s~~~~~~~~G~~vg~~l~G~l~~~~~~~~~f~~~a~l~ll~~~~~-~~~~E~  211 (468)
T TIGR00788       134 KALYDVLVDSLYSERIR-ESPSAGPSLVSWMWGASATGGLISSLLGGPLLDKTLTRILFLITAALLLLQLFVS-NLSKER  211 (468)
T ss_pred             HHHHHHhHHHHHhhhhh-cCCCcCCCeeeHHHHHHHHHHHHHHHHHHHHHHhcCcchHHHHHHHHHHHHHHHH-Hhcccc
Confidence            34444566678888888 44443   44444455668999999999999999999999998877766553222 233443


Q ss_pred             CC-CCCCCCHHHHHH--HHhcc-CCCCCCCCCChhHhhcchHHHHHHHHHHH-HHHH-HHHHHHhHHHHHHHHhCCCccc
Q 021674           82 PA-EDPQLRPAEKKL--IVSSC-ASKEPVKTIPWGLILSKPPVWALIVSHFC-HNWG-TFILLTWMPTYYNQVLHFNLTE  155 (309)
Q Consensus        82 p~-~~~~~~~~~~~~--~~~~~-~~~~~~~~~~~~~l~~~~~~~~~~~~~~~-~~~~-~~~~~~wlp~~l~~~~g~s~~~  155 (309)
                      ++ ..|+..+.+...  ..... .+.......+.++.+++|..|...+..++ .... ......++  +.++..|+|+.+
T Consensus       212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~i~~~l~fifl~~~~~~~~~~~~f~--~~~~~lG~s~~~  289 (468)
T TIGR00788       212 RAFVRPRIGTYLEMNMALLTLGVLANVKVQILGLRGAIQLLEIAKPLIFIFLSYANLPGASGSVFC--ATTQCLPGGPSF  289 (468)
T ss_pred             cccccccccccchhhhhhhhhhHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHhhcCCCCceeEE--EEcccCCCCcch
Confidence            21 111111100000  00000 00000000123455788888764443333 1111 11101111  334578999999


Q ss_pred             hhhHhhhhHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHhhHHHHHHHHH---h---hc----cCchHHHHHH-HH
Q 021674          156 SGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQ---L---SH----VDSPAMAVLC-MA  224 (309)
Q Consensus       156 ~g~~~~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~~~~~~~~~~~~~---~---~~----~~~~~~~~~~-~~  224 (309)
                      .|+...+.+++..++..+.+++.+|++.|        +.+. ++.+...+....   .   ..    ..+....... ..
T Consensus       290 ~G~~~~~~~v~~i~g~~~~~~~~~~~~~r--------~~l~-~~~~l~~~~~~~~~~l~~~~~~~~gi~~~~~~~~~~~l  360 (468)
T TIGR00788       290 SGMSKVVGNLGSLCGVGGYDRFLKTFPYR--------LLFG-VTTLLYTLSSLFDLILVKRWNLAFGISDEVFVLGDSII  360 (468)
T ss_pred             hhhHHHHHHHHHHHHHHHHHHHHhhCCHH--------HHHH-HHHHHHHHHHhCceeeeeccccccCCCCeeeeeehhHH
Confidence            99999887766666666666665555433        2221 222222111100   0   00    0111111111 11


Q ss_pred             HHHhhhhhhhcchhhhh-hccCCCchHHHHHHHhHhHhhhhhHHHhHHHhhcccCC
Q 021674          225 CSQGTDAFSQSGLYSNH-QDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGS  279 (309)
Q Consensus       225 ~~~~~~~~~~~~~~~~~-~~~~~~~~g~a~~~~~~~~~lgg~i~~~~~g~l~~~~~  279 (309)
                      -..+.+ +......... +..+++..|+..++.+...++|+.+++.++|.+.++.+
T Consensus       361 ~~~~~g-~~~~~~~~~~~~~~p~~~egt~~al~~s~~~lg~~v~~~~gg~l~~~~g  415 (468)
T TIGR00788       361 AEVLAQ-LKFMPFLVLLARLCPSGCESSVFALLASILHLGSSVSGFLGVLLMETIG  415 (468)
T ss_pred             HHHHHH-HHHccHHHHHHHhCCCCceehHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence            111111 1122222222 33456788999999999999999999999999887643

The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.

>PRK12382 putative transporter; Provisional

Probab=99.24  E-value=2.2e-10  Score=105.08  Aligned_cols=168  Identities=14%  Similarity=0.118  Sum_probs=103.9

Q ss_pred             chHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhCCCccchhhHhhhhHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHH
Q 021674          117 KPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQ  196 (309)
Q Consensus       117 ~~~~~~~~~~~~~~~~~~~~~~~wlp~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~  196 (309)
                      ++.++......++...........+|.++++++|+|+.+.|+..+...++..++.+..|+++||+|||+.....      
T Consensus        14 ~~~~~~~~~~~~~~~~~~~~~~p~l~~~l~~~lg~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~g~r~~l~~~------   87 (392)
T PRK12382         14 NFSLFRIAFAVFLTYMTVGLPLPVIPLFVHHDLGFGNTMVGIAVGIQFLATVLTRGYAGRLADQYGAKRSALQG------   87 (392)
T ss_pred             cccHHHHHHHHHHHHHHHHHHhhhhhHHHHHhcCCcHHHHHHHHHHHHHHHHHHhhhhhHHHHhhcchHHHHHH------
Confidence            44455555555555556666778888899999999999999999999999999999999999999987421110      


Q ss_pred             HHhhHHHHHHHHHhhc-----cCchHHHHHH-HHHHHhhhhhhhcchhhh-hhccCCCchHHHHHHHhHhHhhhhhHHHh
Q 021674          197 SIGFLGPAFFLTQLSH-----VDSPAMAVLC-MACSQGTDAFSQSGLYSN-HQDIAPRYSGVLLGLSNTAGVLAGVFGTA  269 (309)
Q Consensus       197 ~~~~~~~~~~~~~~~~-----~~~~~~~~~~-~~~~~~~~~~~~~~~~~~-~~~~~~~~~g~a~~~~~~~~~lgg~i~~~  269 (309)
                      ........+.......     ..+.....+. ...+.+.... .+...+. .+..++++|+.+.+..+...+++..++|.
T Consensus        88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~-~~~~~~~~~~~~~~~~r~~a~~~~~~~~~~g~~~g~~  166 (392)
T PRK12382         88 MLACGLAGLAYLLAAILPVSAPFKFALLVVGRLILGFGESQL-LTGALTWGLGLVGPKHSGKVMSWNGMAMYGALAAGAP  166 (392)
T ss_pred             HHHHHHHHHHHHhhhccccchhHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHhhCCccccchhhhHHHHHHHHHHHHHHH
Confidence            0111011111000001     0111111111 1222222111 1111111 22345678999999988888889999999


Q ss_pred             HHHhhcccCCchHHHHHHHHHH
Q 021674          270 ATGYILQHGSWDDVFKVSVGLY  291 (309)
Q Consensus       270 ~~g~l~~~~~~~~~~~~~~~~~  291 (309)
                      +.+.+.+..+|+..+.+.....
T Consensus       167 ~~~~l~~~~g~~~~~~~~~~~~  188 (392)
T PRK12382        167 LGLLLHSHFGFAALALTTMVLP  188 (392)
T ss_pred             HHHHHHhccChHHHHHHHHHHH
Confidence            9999988878887666544333

>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]

Probab=99.24  E-value=7.7e-11  Score=105.63  Aligned_cols=175  Identities=11%  Similarity=0.096  Sum_probs=118.0

Q ss_pred             HHHHHHHHHHHHHHH---HHHhHHHHHHHHhCCCccchhhHhhhhHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHH
Q 021674          122 ALIVSHFCHNWGTFI---LLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSI  198 (309)
Q Consensus       122 ~~~~~~~~~~~~~~~---~~~wlp~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~~  198 (309)
                      .+....++.+.++|-   .++..-+.++++.|+|-.|.|.+.+...++-.++..+.|.++||...|.         ++..
T Consensus        29 qif~~~fiGYa~fYl~RknF~~a~p~l~e~~~lsk~~lG~i~s~f~i~YG~sKf~~G~~sDr~npr~---------fm~~   99 (448)
T COG2271          29 QIFLSIFIGYAAFYLTRKNFNLAMPALIEDGGLSKTQLGILGSAFSITYGVSKFVMGVLSDRSNPRY---------FMAF   99 (448)
T ss_pred             HHHHHHHHHHHHHHHHHHhHhhccHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCce---------eehH
Confidence            344444554455544   2244445566667899999999999999999999999999999988663         2334


Q ss_pred             hhHHHHHHHHHhhccCchHHHHHH-HHHHHhhhhhhhcchhhhh-hccCCCchHHHHHHHhHhHhhhhhHHHhHH--Hhh
Q 021674          199 GFLGPAFFLTQLSHVDSPAMAVLC-MACSQGTDAFSQSGLYSNH-QDIAPRYSGVLLGLSNTAGVLAGVFGTAAT--GYI  274 (309)
Q Consensus       199 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~-~~~~~~~~g~a~~~~~~~~~lgg~i~~~~~--g~l  274 (309)
                      +++.+++....+...++.....++ ...+.. .....++..... +=.++++||+..++=|+..|+||++.|.+.  +.+
T Consensus       100 gLilsai~nil~Gfs~s~~~~~~l~~lng~f-Qg~Gwpp~~~~i~~Wfsr~eRG~~~siWn~shNiGGal~~~~~~la~~  178 (448)
T COG2271         100 GLILSAIVNILFGFSPSLFLFAVLWVLNGWF-QGMGWPPCARTITHWFSRKERGTWWSIWNTSHNIGGALAPLVALLAFF  178 (448)
T ss_pred             HHHHHHHHHHHHhhhhHHHHHHHHHHHHHHH-hcCCCcHHHHHHHHHcCccccCceEEEehhhhhcccchHHHHHHHHHH
Confidence            444455444444443332222222 222221 112223333332 334667899999999999999999999999  999


Q ss_pred             cccCCchHHHHHHHHHHHHHHHHHHhhcCCcc
Q 021674          275 LQHGSWDDVFKVSVGLYLVGTAVWNLFSTGEK  306 (309)
Q Consensus       275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  306 (309)
                      .++++|+..|++.+++.++..++..+..++.+
T Consensus       179 ~~~~~w~~~f~~pgiiaiival~~~~~~rd~P  210 (448)
T COG2271         179 AFHGGWRAAFYFPGIIAIIVALILLFLLRDRP  210 (448)
T ss_pred             HhccchhHHHHHHHHHHHHHHHHHHHHhCCCc
Confidence            99989999999988888877777666665554

>PTZ00207 hypothetical protein; Provisional

Probab=99.24  E-value=1.4e-09  Score=103.84  Aligned_cols=182  Identities=15%  Similarity=0.120  Sum_probs=119.3

Q ss_pred             CCcccccchhhHHHHHhccCCCcchhHHHHHHHhhhhhHHHHhhhhHHHHhhhcCCcchhHhhhhHHHHHHHHHHhhccc
Q 021674            1 MGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVWLSKAHS   80 (309)
Q Consensus         1 ~Gig~g~~~p~~~~~i~~~~p~~~rg~~~g~~~~~~~~g~~lg~~l~~~l~~~~gWr~~F~i~~~~~~v~~~~~~~~~~~   80 (309)
                      +|+|++...+++...+.+||| ++||+++|+..+..++|+++..++...+.+ .+|++.|++.+++++++.++++...++
T Consensus       130 ~G~G~~~~~~~~~~~i~~~Fp-~~RG~a~Gi~~~~~gLGsaI~~~l~~~l~~-~~~~~~fl~l~vl~~vv~ll~~~~vr~  207 (591)
T PTZ00207        130 MTLGCMLFDLGAVVTVLSVFP-SNRGAVVAIMKTFTGLGSAILGSIQLAFFS-DNTSAYFFFLMSFALVVGILAIVFMRL  207 (591)
T ss_pred             HHHHHHHHHHHHHHHHHHhCh-hhhHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhHHHHHHHHHHHHHHHHHHHHhheeC
Confidence            377888888999999999997 789999999999999999875555444444 479999999888887765555544433


Q ss_pred             CCCC-----CCCCCHHHHH------------------H-------------------------------------HH---
Q 021674           81 SPAE-----DPQLRPAEKK------------------L-------------------------------------IV---   97 (309)
Q Consensus        81 ~p~~-----~~~~~~~~~~------------------~-------------------------------------~~---   97 (309)
                      .|..     +.+.+++|+.                  .                                     ..   
T Consensus       208 p~~~~~~~~~~~~~~~~~~~~~~~~~~y~~q~~p~~~f~~~~~i~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~v~~~ll  287 (591)
T PTZ00207        208 PPFHLTGYQEKHLDEEEKAQRLMRKGVYLKQKAPMWRFVYGFVILIILIVFLPLQGALVAYLKLGSNFKVGFAVTVIVLT  287 (591)
T ss_pred             CcchhhcccccCCCHHHHHHHhhhhhhhhhcCCCceehhhHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHH
Confidence            3311     1111222221                  0                                     00   


Q ss_pred             ---h--------------c-cCC---------------C---------C---CCCCCChhHhhcchHHHHHHHHHHHHHH
Q 021674           98 ---S--------------S-CAS---------------K---------E---PVKTIPWGLILSKPPVWALIVSHFCHNW  132 (309)
Q Consensus        98 ---~--------------~-~~~---------------~---------~---~~~~~~~~~l~~~~~~~~~~~~~~~~~~  132 (309)
                         .              + +.+               +         +   |.....+.+.+++..+|.++..++|..-
T Consensus       288 l~~p~l~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~t~~q~l~~~d~Wll~~~~~cg~g  367 (591)
T PTZ00207        288 VIFPFMAFPLTTFDGKRPHDDSDGKAKEHVEAGEEVSAAEDKVVETDVDYIAPQFQETFIEGLKTARLWCLLWSIFCCVG  367 (591)
T ss_pred             HHHHHHhhhHHHhccCCcCCCccccccccccccccccccccccccccccCCCCCCcchHHHHHhchhHHHHHHHHHHhhC
Confidence               0              0 000               0         0   0000134556677889999988888766


Q ss_pred             HHHHHHHhHHHHHHHHhCCCccc--hhhHhhhhHHHHHHHHHHHHHHHHHHHHc
Q 021674          133 GTFILLTWMPTYYNQVLHFNLTE--SGLFCVLPWLTMAFSANLGGWIADTLVSK  184 (309)
Q Consensus       133 ~~~~~~~wlp~~l~~~~g~s~~~--~g~~~~~~~~~~~ig~~~~G~l~dr~~~r  184 (309)
                      ....+++.+-...+..-|.+..+  ..++.++.+++..+|.+..|+++...-+|
T Consensus       368 ~gl~~~~N~~qI~~sl~g~~~~~~~~~~~vsL~si~~~~GRl~~g~~~~~~~~~  421 (591)
T PTZ00207        368 AHFVIIFNARFIYTALAGEAPDDALNTLLTVLNGVGSAVGRLCMSYFEIWSQKR  421 (591)
T ss_pred             chheeeecHHHHHHHhcCCCCCccceeeehhhhhHHHHhhHHHHHHHHHHHHhh
Confidence            66677777777776543774333  33377889999999999999999444333

>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []

Probab=99.23  E-value=1.3e-09  Score=99.29  Aligned_cols=263  Identities=11%  Similarity=0.070  Sum_probs=143.7

Q ss_pred             hHHHHHHHhhhhhHHHHhhhhHHHHhhhcCCcchhHhhhhHHHHHHHHHHhhcccCCCCCCCCCHHHHHHHHhccCCCCC
Q 021674           26 SRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEP  105 (309)
Q Consensus        26 g~~~g~~~~~~~~g~~lg~~l~~~l~~~~gWr~~F~i~~~~~~v~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~  105 (309)
                      +.=.|=.-...++|-+++..++|.+.+. +=+..|++....+++..++.+...++++++.+. .++++       .++++
T Consensus       137 ~feYG~~R~wGSig~ai~s~~~G~L~~i-~p~~~fwi~s~~~~il~lll~~~~~~~~~~~~~-~~~~~-------~~~~~  207 (412)
T PF01306_consen  137 GFEYGRARMWGSIGFAIASLLAGILFNI-NPNIIFWIASAAAIILLLLLLLLKPDVPPQAEV-ADALG-------AKKDK  207 (412)
T ss_dssp             SS-HHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHSS---SSSSS-S-STTSS-------S----
T ss_pred             cCCcchHHHHhhHHHHHHHHHhheeeee-CccHHHHHHHHHHHHHHHHHHHcCCcCchhhhh-hcccc-------cCCCC
Confidence            3444555566788888888888888763 335778875555554433333233333322111 11000       00111


Q ss_pred             CCCCChhHhhcchHHHHHHHHHHHHHHHHHHHHHhHHHHHHHH---hCCCccchhhHhhhhHHHHHHHHHHHHHHHHHHH
Q 021674          106 VKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQV---LHFNLTESGLFCVLPWLTMAFSANLGGWIADTLV  182 (309)
Q Consensus       106 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~wlp~~l~~~---~g~s~~~~g~~~~~~~~~~~ig~~~~G~l~dr~~  182 (309)
                      .+..+..+++|+|++|.+.+........++.+-.-.|.|+.+-   .+.+....|.+.+...+.=.+...+..++.+|+|
T Consensus       208 ~~~~~~~~l~k~~~fw~~~l~v~g~~~~Y~vfdqqf~~y~~~~f~~~~~g~~~~G~l~s~~v~~E~~~m~~~p~li~rig  287 (412)
T PF01306_consen  208 VSLKDVLSLFKMRNFWFFVLFVIGVAAIYDVFDQQFPIYFASFFQSAGQGNQMYGYLWSVQVFLEALMMFFSPWLINRIG  287 (412)
T ss_dssp             --HHHHHHHTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-
T ss_pred             CcHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccChhHHhHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence            0011234688999999877665555444555555577777642   2344455677777777777888889999999999


Q ss_pred             HcCCChhhHHHHHHHHhhHHHHHHHHHhhccCchHHHHHHHHHHHhhhhhhhcchhhhh-hccCCCchHHHHHH-HhHhH
Q 021674          183 SKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSPAMAVLCMACSQGTDAFSQSGLYSNH-QDIAPRYSGVLLGL-SNTAG  260 (309)
Q Consensus       183 ~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~g~a~~~-~~~~~  260 (309)
                      .|+        .+...+.+.. +=.......++++.....=..-..-.+....+.+... ...+++..++...+ .+...
T Consensus       288 ~k~--------~Lllag~i~~-iRi~~~~~~~~~~~i~~~klLH~~e~~l~lva~fkYI~~~fd~rlsAt~y~v~~~~~~  358 (412)
T PF01306_consen  288 AKN--------LLLLAGVIMA-IRIIGSGFATNPWVISLIKLLHALEFPLLLVAAFKYITAHFDKRLSATLYLVGFQFAK  358 (412)
T ss_dssp             HHH--------HHHHHHHHHH-HHHHHHHT--SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS-GGGHHHHHHHHHTTTH
T ss_pred             hHh--------HHHHHHHHHH-HHHHHHhhhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhHHHHHHHHHHHHHH
Confidence            763        2222222211 1112223345555433221110000111112222222 33456677777776 46788


Q ss_pred             hhhhhHHHhHHHhhcccCCchHHHHHHHHHHHHHHHHHHhhcCCcc
Q 021674          261 VLAGVFGTAATGYILQHGSWDDVFKVSVGLYLVGTAVWNLFSTGEK  306 (309)
Q Consensus       261 ~lgg~i~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  306 (309)
                      +++.++.+.+.|.+-|+-|++..|++.+.+.++..++-.+..++++
T Consensus       359 ~~~~~i~s~~~G~lyd~~G~~~tylimg~iv~~~~li~~f~l~~~~  404 (412)
T PF01306_consen  359 QIGIIILSPLAGYLYDRIGFQHTYLIMGLIVLPFTLISAFTLKKDK  404 (412)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS--SS
T ss_pred             HHHHHHHhhhHHhhHhhcCcHHHHHHHHHHHHHHHHHheeeecCCC
Confidence            8999999999999999988888888877777666666555554444

The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.

>PRK15011 sugar efflux transporter B; Provisional

Probab=99.23  E-value=9.6e-10  Score=101.10  Aligned_cols=178  Identities=11%  Similarity=0.067  Sum_probs=105.6

Q ss_pred             hhcchHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhCCCccchhhHhhhhHH-HHHHHHHHHHHHHHHHHHcCCChhhHH
Q 021674          114 ILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWL-TMAFSANLGGWIADTLVSKGLSVTTVR  192 (309)
Q Consensus       114 l~~~~~~~~~~~~~~~~~~~~~~~~~wlp~~l~~~~g~s~~~~g~~~~~~~~-~~~ig~~~~G~l~dr~~~r~~~~~~~~  192 (309)
                      .+ |.+.+..+...++...+.......+|.|+++++|.|+.+.|+..+...+ +...+.+.+++ +||+|+|+.      
T Consensus        12 ~~-~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~~~~-~dr~g~r~~------   83 (393)
T PRK15011         12 SF-DLTSTAFLIVAFLTGIAGALQTPTLSIFLTDEVHARPAMVGFFFTGSAVIGILVSQFLAGR-SDKRGDRKS------   83 (393)
T ss_pred             hc-cchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHH-HhcccchhH------
Confidence            44 5556666667777777777888999999999999999999998765544 55566666777 999998742      


Q ss_pred             HHHHHHhhHHHHHHHHHhhccCchHHHHHHHHHHHhhhhhhhcchhhhhhcc-CCCc--hHHHHHHHhHhHhhhhhHHHh
Q 021674          193 KIMQSIGFLGPAFFLTQLSHVDSPAMAVLCMACSQGTDAFSQSGLYSNHQDI-APRY--SGVLLGLSNTAGVLAGVFGTA  269 (309)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~--~g~a~~~~~~~~~lgg~i~~~  269 (309)
                       .+. .......+........++............+......+.......+. +++.  .+...+..+...++|..++|.
T Consensus        84 -~~~-~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~g~~  161 (393)
T PRK15011         84 -LIV-FCCLLGVLACTLFAWNRNYFVLLFVGVFLSSFGSTANPQMFALAREHADKTGREAVMFSSFLRAQVSLAWVIGPP  161 (393)
T ss_pred             -HHH-HHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHHHHhhH
Confidence             111 11111111111111222232221111111111111111111112222 2222  344557788888999999999


Q ss_pred             HHHhhcccCCchHHHHHHHHHHHHHHHHHHhh
Q 021674          270 ATGYILQHGSWDDVFKVSVGLYLVGTAVWNLF  301 (309)
Q Consensus       270 ~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~  301 (309)
                      +.+.+.++.+|+..|++.++..++..+....+
T Consensus       162 i~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~  193 (393)
T PRK15011        162 LAYALAMGFSFTVMYLSAAVAFIVCGVMVWLF  193 (393)
T ss_pred             HHHHHHHhcChHHHHHHHHHHHHHHHHHHHhh
Confidence            99999988889999988777666555444443

>TIGR02332 HpaX 4-hydroxyphenylacetate permease

Probab=99.23  E-value=8.8e-10  Score=102.08  Aligned_cols=167  Identities=11%  Similarity=0.024  Sum_probs=104.1

Q ss_pred             HHHHHHHHHHHHHHHHhHHHHHHHHhCCCccchhhHhhhhHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHhhHHH
Q 021674          124 IVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGP  203 (309)
Q Consensus       124 ~~~~~~~~~~~~~~~~wlp~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~~~~~~~  203 (309)
                      .+.+++...-......-.| .+++++|+|..+.++..+...++..++.+..|+++||+|||+.        +. .+....
T Consensus        14 ~~~~~~~~~d~~~~~~~~~-~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~G~r~~--------~~-~~~~~~   83 (412)
T TIGR02332        14 FILFIFSFLDRINIGFAGL-TMGKDLGLSATMFGLAATLFYAAYVICGIPSNIMLAIIGARRW--------IA-GIMVLW   83 (412)
T ss_pred             HHHHHHHHhhhhhHHHHHH-hhHhhcCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhChHHH--------HH-HHHHHH
Confidence            3333433333344444444 7888999999999999999999999999999999999998741        11 111111


Q ss_pred             HHHHHHhhccCchHHHHH-HHHHHHhhhhhhhcchhhhhhcc-CCCchHHHHHHHhHhHhhhhhHHHhHHHhhcc-----
Q 021674          204 AFFLTQLSHVDSPAMAVL-CMACSQGTDAFSQSGLYSNHQDI-APRYSGVLLGLSNTAGVLAGVFGTAATGYILQ-----  276 (309)
Q Consensus       204 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~a~~~~~~~~~lgg~i~~~~~g~l~~-----  276 (309)
                      .+........++...... -...+.+.+.. .+.......+. ++++|+.+.++.+....+|..+++.+.+++.+     
T Consensus        84 ~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~-~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~  162 (412)
T TIGR02332        84 GIASTATMFATGPESLYLLRILVGIAEAGF-LPGILLYLTFWFPAYFRARANALFMIAMPVTMALGLILSGYILALDGLM  162 (412)
T ss_pred             HHHHHHHHHhcCHHHHHHHHHHHHHHHhhH-HHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCC
Confidence            111111122233333222 22223332221 12222223343 55689999999999999999999999998874     


Q ss_pred             -cCCchHHHHHHHHHHHHHHHHHHhh
Q 021674          277 -HGSWDDVFKVSVGLYLVGTAVWNLF  301 (309)
Q Consensus       277 -~~~~~~~~~~~~~~~~~~~~~~~~~  301 (309)
                       ..+|+..|.+.++..++..++..++
T Consensus       163 ~~~gwr~~f~~~~~~~l~~~~~~~~~  188 (412)
T TIGR02332       163 ALKGWQWLFLLEGFPSVILGVMTWFW  188 (412)
T ss_pred             CccchhHHHHHHHHHHHHHHHHHhhc
Confidence             2589999998766665554444444

This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.

>TIGR00903 2A0129 major facilitator 4 family protein

Probab=99.22  E-value=6.6e-10  Score=101.34  Aligned_cols=155  Identities=12%  Similarity=0.048  Sum_probs=98.1

Q ss_pred             HHHhHHHHHHHHhCCCccchhhHhhhhHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHhhHHHHHHHHHhhccCch
Q 021674          137 LLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSP  216 (309)
Q Consensus       137 ~~~wlp~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  216 (309)
                      +...+|.+ ++++|+|..+.|++.+...++..++.+..|+++||+|||+.        +. ..+.............++.
T Consensus        10 ~~~~lp~i-~~~~~~s~~~~g~~~s~~~~g~~i~~~~~G~l~Dr~grr~~--------~~-~~~~~~~~~~~~~~~~~~~   79 (368)
T TIGR00903        10 FSPVLSLV-AEDIDVSKEELGLLAITYPAAFLALTIPSGLLLDRAFKRWF--------LF-GSLATFAAAAGRLLDPFNY   79 (368)
T ss_pred             HHhhHHHH-HHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccchHH--------HH-HHHHHHHHHHHHHHHhccH
Confidence            33445555 55689999999999999999999999999999999996521        11 1111111111101111223


Q ss_pred             HHHHHH-HHHHHhhhhhhhcchhhhhhccCCCchHHHHHHHhHhHhhhhhHHHhHHHhhcccCCchHHHHHHHHHHHHHH
Q 021674          217 AMAVLC-MACSQGTDAFSQSGLYSNHQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSWDDVFKVSVGLYLVGT  295 (309)
Q Consensus       217 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~g~a~~~~~~~~~lgg~i~~~~~g~l~~~~~~~~~~~~~~~~~~~~~  295 (309)
                      ...+.. +..+.+.+.. ........+..++++|+.+.++.+....+|..+++.+.+.+.++.+|+..|.+.+++.++..
T Consensus        80 ~~l~~~R~l~G~g~~~~-~~~~~~~~~~~~~~~r~~a~~~~~~~~~lG~~l~~~~~~~l~~~~gWr~~f~~~~~l~~~~~  158 (368)
T TIGR00903        80 EWLLACQLLAALGQPFL-LNAFAPAASQIREERRDLVISLLSFAMYLGIIFALAAGLKIYTAGGLQLLIIPIAAVAAAGI  158 (368)
T ss_pred             HHHHHHHHHHHhHhHHH-HHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHH
Confidence            222222 2222222211 11111122345678999999999999999999999999999988899999988666665555


Q ss_pred             HHHHhhc
Q 021674          296 AVWNLFS  302 (309)
Q Consensus       296 ~~~~~~~  302 (309)
                      +.+.++.
T Consensus       159 ~~~~~~l  165 (368)
T TIGR00903       159 ILVLAAL  165 (368)
T ss_pred             HHHHHHc
Confidence            5545443

This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.

>PRK03699 putative transporter; Provisional

Probab=99.21  E-value=2.1e-09  Score=98.92  Aligned_cols=167  Identities=13%  Similarity=0.090  Sum_probs=102.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhHHHHHHHHhCCCccchhhHhhhhHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHh
Q 021674          120 VWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIG  199 (309)
Q Consensus       120 ~~~~~~~~~~~~~~~~~~~~wlp~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~~~  199 (309)
                      .|...+.+++.....+.+...+|.+. +++|+|..+.++..+...++..++.++.|+++||+++|+.        +. .+
T Consensus         9 ~~~~~~~~~~~~~~~~~~g~~~~~i~-~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~g~r~~--------~~-~~   78 (394)
T PRK03699          9 TWISFLSYALTGALVIVTGMVMGPIA-EYFNLPVSSMSNTFTFLNAGILISIFLNAWLMEIIPLKRQ--------LI-FG   78 (394)
T ss_pred             HHHHHHHHHHHHHHHHHHhhhhHHHH-HHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHH--------HH-HH
Confidence            34444444444444556667777765 5689999999999999999999999999999999998741        11 11


Q ss_pred             hHHHHHHHHHhhccCchHHHHHH-HHHHHhhhhhhhcchhhhhhc-cCCCchHHHHHHHhHhHhhhhhHHHhHHHhhccc
Q 021674          200 FLGPAFFLTQLSHVDSPAMAVLC-MACSQGTDAFSQSGLYSNHQD-IAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQH  277 (309)
Q Consensus       200 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~-~~~~~~g~a~~~~~~~~~lgg~i~~~~~g~l~~~  277 (309)
                      .....+........++....... ...+.+.+ ...+.......+ .++++|+.+.+..+....+++.++|.+.+.+++.
T Consensus        79 ~~~~~i~~~l~~~~~~~~~~~~~~~l~G~~~g-~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~  157 (394)
T PRK03699         79 FALMILAVAGLMFSHSLALFSIAMFVLGVVSG-ITMSIGTFLITHVYEGKQRGSRLLFTDSFFSMAGMIFPIIAAYLLAR  157 (394)
T ss_pred             HHHHHHHHHHHHHcchHHHHHHHHHHHHHhhH-hhccchhHHhhhhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence            11111111111122333322222 22222222 111112222223 3446789999988888889999999999988764


Q ss_pred             -CCchHHHHHHHHHHHHHHHH
Q 021674          278 -GSWDDVFKVSVGLYLVGTAV  297 (309)
Q Consensus       278 -~~~~~~~~~~~~~~~~~~~~  297 (309)
                       .+|+..|.+.+.+.++..+.
T Consensus       158 ~~gw~~~f~~~~~~~~~~~~~  178 (394)
T PRK03699        158 SIEWYWVYACIGLVYVAIFIL  178 (394)
T ss_pred             cccHHHHHHHHHHHHHHHHHH
Confidence             68999998776666554433

>TIGR00900 2A0121 H+ Antiporter protein

Probab=99.20  E-value=5.6e-10  Score=100.62  Aligned_cols=169  Identities=12%  Similarity=0.021  Sum_probs=105.2

Q ss_pred             HHHHHHHHHHHHHHHHHhHHHHHHHHhCCCccchhhHhhhhHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHhhHH
Q 021674          123 LIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLG  202 (309)
Q Consensus       123 ~~~~~~~~~~~~~~~~~wlp~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~~~~~~  202 (309)
                      +....++...+......-+|.|..+ .+.|..+.+++.+...++..++.++.|+++||+|||+....      .......
T Consensus         4 l~~~~~~~~~~~~~~~~~~~~~~~~-~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~g~r~~~~~------~~~~~~~   76 (365)
T TIGR00900         4 LFAAQLISLIGTAITQVALPLYVLA-GTGSASVLSLAALAGMLPYVVLSPIAGALADRYDRKKVMIG------ADLIRAV   76 (365)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHH-hhccHHHHHHHHHHHHHHHHHHHHhhhHHHHhhchhHHHHH------HHHHHHH
Confidence            3444555555555666777887765 69999999999999999999999999999999998742111      0010001


Q ss_pred             HHHHHHHhhcc--CchHHHHH-HHHHHHhhhhhhhcchhhhhhcc-CCCchHHHHHHHhHhHhhhhhHHHhHHHhhcccC
Q 021674          203 PAFFLTQLSHV--DSPAMAVL-CMACSQGTDAFSQSGLYSNHQDI-APRYSGVLLGLSNTAGVLAGVFGTAATGYILQHG  278 (309)
Q Consensus       203 ~~~~~~~~~~~--~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~a~~~~~~~~~lgg~i~~~~~g~l~~~~  278 (309)
                      ...........  .+.+.... ....+.+.+ ...+...+...|. ++++++.+.+..+....+|..++|.+.+.+.++.
T Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~  155 (365)
T TIGR00900        77 LVAVLPFVALLGGLNIWQVYVLAGILAIAQA-FFTPAYQAMLPDLVPEEQLTQANSLSQAVRSLFYIVGPGIGGLMYATL  155 (365)
T ss_pred             HHHHHHHHHHcCCCcHHHHHHHHHHHHHHHH-HHHHHHHHHHHhcCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            11111111111  12222222 122222221 1122222333343 4468999999999999999999999999999888


Q ss_pred             CchHHHHHHHHHHHHHHHHHH
Q 021674          279 SWDDVFKVSVGLYLVGTAVWN  299 (309)
Q Consensus       279 ~~~~~~~~~~~~~~~~~~~~~  299 (309)
                      +|+..|.+.+...+++.+...
T Consensus       156 g~~~~~~~~~~~~~~~~~~~~  176 (365)
T TIGR00900       156 GIKWAIWVDAVGFAISALLIV  176 (365)
T ss_pred             hHHHHHHHHHHHHHHHHHHHH
Confidence            899988877666655544433

>PRK03545 putative arabinose transporter; Provisional

Probab=99.20  E-value=8.1e-10  Score=101.41  Aligned_cols=170  Identities=16%  Similarity=0.071  Sum_probs=105.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhHHHHHHHHhCCCccchhhHhhhhHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHh
Q 021674          120 VWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIG  199 (309)
Q Consensus       120 ~~~~~~~~~~~~~~~~~~~~wlp~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~~~  199 (309)
                      .+.+.+..++.....+.....+|. +++++|.|..+.++......++..++.+..|+++||++||+.        +. .+
T Consensus        11 ~~~l~~~~~~~~~~~~~~~~~~~~-l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~--------~~-~~   80 (390)
T PRK03545         11 VVTLALAAFIFNTTEFVPVGLLSD-IAQSFHMQTAQVGLMLTIYAWVVALMSLPLMLLTSNVERRKL--------LI-GL   80 (390)
T ss_pred             HHHHHHHHHHHHhHHHHHHcchHH-HHhHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHH--------HH-HH
Confidence            344444444443444444445665 456799999999999999999999999999999999998731        11 11


Q ss_pred             hHHHHHHHHHhhccCchHHHHHH-HHHHHhhhhhhhcchhhhhhc-cCCCchHHHHHHHhHhHhhhhhHHHhHHHhhccc
Q 021674          200 FLGPAFFLTQLSHVDSPAMAVLC-MACSQGTDAFSQSGLYSNHQD-IAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQH  277 (309)
Q Consensus       200 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~-~~~~~~g~a~~~~~~~~~lgg~i~~~~~g~l~~~  277 (309)
                      ..............++.+..... ...+.+.+.. .+...+...+ .++++|+.+.++.+....++..++|.+.+.+.++
T Consensus        81 ~~~~~~~~~~~~~~~~~~~l~~~r~~~G~~~~~~-~~~~~~~i~~~~~~~~r~~~~g~~~~~~~~g~~ig~~l~~~l~~~  159 (390)
T PRK03545         81 FVLFIASHVLSALAWNFTVLLISRIGIAFAHAIF-WSITASLAIRVAPAGKKAQALSLLATGTALAMVLGLPLGRVIGQY  159 (390)
T ss_pred             HHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHH-HHHHHHHHHHhCChhhhhhHHHHHHHHHHHHHHHHhhHHHHHHHH
Confidence            11111111112223344333222 2222221111 1111222233 3557899999999999999999999999999888


Q ss_pred             CCchHHHHHHHHHHHHHHHHHHh
Q 021674          278 GSWDDVFKVSVGLYLVGTAVWNL  300 (309)
Q Consensus       278 ~~~~~~~~~~~~~~~~~~~~~~~  300 (309)
                      .+|+..|.+.+++.++..+....
T Consensus       160 ~gw~~~f~~~~~~~~l~~~~~~~  182 (390)
T PRK03545        160 LGWRTTFLAIGGGALITLLLLIK  182 (390)
T ss_pred             hcHHHHHHHHHHHHHHHHHHHHH
Confidence            88999998877776655544333

>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily

Probab=99.20  E-value=9.3e-10  Score=100.25  Aligned_cols=157  Identities=17%  Similarity=0.093  Sum_probs=98.6

Q ss_pred             HHHHHHHhHHHHHHHHhCCCccchhhHhhhhHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHhhHHHHHHHHHhhc
Q 021674          133 GTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSH  212 (309)
Q Consensus       133 ~~~~~~~wlp~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~  212 (309)
                      +.......+|. +++++|.|..+.++......++..++.++.|+++||++||+.        +. .+.............
T Consensus        20 ~~~~~~~~~p~-~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~g~r~~--------~~-~~~~~~~~~~~~~~~   89 (385)
T TIGR00710        20 GIDMYLPAFPE-IAADLSTPASIVQMTLTLYLLGFAAGQLLWGPLSDRYGRRPV--------LL-LGLFIFALSSLGLAL   89 (385)
T ss_pred             HHHHhcccHHH-HHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHH--------HH-HHHHHHHHHHHHHHH
Confidence            33334444554 456789999999999999999999999999999999987631        11 111111111111112


Q ss_pred             cCchHHHHHH-HHHHHhhhhhhhcchhhhhhc-cCCCchHHHHHHHhHhHhhhhhHHHhHHHhhcccCCchHHHHHHHHH
Q 021674          213 VDSPAMAVLC-MACSQGTDAFSQSGLYSNHQD-IAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSWDDVFKVSVGL  290 (309)
Q Consensus       213 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~-~~~~~~g~a~~~~~~~~~lgg~i~~~~~g~l~~~~~~~~~~~~~~~~  290 (309)
                      .++....... ...+.+.+.. .+.......| .++++++.+.++.+....++..++|.+.+.+.++.+|+..|.+.+++
T Consensus        90 ~~~~~~~~~~~~l~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~~~~~~  168 (385)
T TIGR00710        90 SNNIETLLVLRFVQAFGASAG-SVISQALVRDIYPGEELSRIYSILMPVLALAPAVAPLLGGYILVWLSWHAIFAFLSLA  168 (385)
T ss_pred             HccHHHHHHHHHHHHcchhHH-HHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHH
Confidence            2233322221 2222221111 1112222233 34567999999999999999999999999999988899988887766


Q ss_pred             HHHHHHHHHh
Q 021674          291 YLVGTAVWNL  300 (309)
Q Consensus       291 ~~~~~~~~~~  300 (309)
                      .+++.+....
T Consensus       169 ~~~~~~~~~~  178 (385)
T TIGR00710       169 GILLSALIFF  178 (385)
T ss_pred             HHHHHHHHHH
Confidence            6655544433

This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.

>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.19  E-value=3e-10  Score=108.99  Aligned_cols=184  Identities=16%  Similarity=0.226  Sum_probs=131.6

Q ss_pred             CCcccccchhhHHHHHhccCCCcchhHHHHHHHhhhhhHHHHhhhhHHHHhhhc-------------------CCcchhH
Q 021674            1 MGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRF-------------------GWPSVFY   61 (309)
Q Consensus         1 ~Gig~g~~~p~~~~~i~~~~p~~~rg~~~g~~~~~~~~g~~lg~~l~~~l~~~~-------------------gWr~~F~   61 (309)
                      .|+|+-..+|...+++-|...+|+-..++|++.+...+|+++|..+++++...+                   -|..-|+
T Consensus       247 ~GIG~Tpi~tlGisYiDDnvk~~~SplYlgi~~~~~~lGPaiGfllgS~~l~lYvD~~~~~~~it~~DPrWIGAWWlGFL  326 (735)
T KOG3626|consen  247 LGIGATPIFTLGISYIDDNVKKKNSPLYLGILYSMAILGPAIGFLLGSFCLKLYVDFGLSPIGITPTDPRWIGAWWLGFL  326 (735)
T ss_pred             hhcCCCCCccCCCccccccccccCCcHHHHHHHHHHHhhhHHHHHHHHHHHHeeeccccCCCCCCCCCcchhhHHHHHHH
Confidence            389999999999999999999999999999999999999999999999886532                   2566677


Q ss_pred             hhhhHHHHHHHHHHhhcccCCCCCCCCCHHHHHHHHhccC-CCC-CC--C---C--CChhHhhcchHHHHHHHHHHHHHH
Q 021674           62 SFGSLGTVWFTVWLSKAHSSPAEDPQLRPAEKKLIVSSCA-SKE-PV--K---T--IPWGLILSKPPVWALIVSHFCHNW  132 (309)
Q Consensus        62 i~~~~~~v~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~-~~~-~~--~---~--~~~~~l~~~~~~~~~~~~~~~~~~  132 (309)
                      +.|.+.++..+.++.+.++.|+..++....+.+..+++.. .++ +.  +   +  ...+++++||.+....+...+...
T Consensus       327 i~g~~~~~~a~p~f~fPk~lp~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~ikdfp~s~~~ll~N~if~~~~l~~~~~~~  406 (735)
T KOG3626|consen  327 ICGALLLFSAVPLFFFPKELPKSQKRKRARDLHVLKTESGGAKSDKTFGKKIKDFPKSIKRLLSNPIFMLVVLASVIESL  406 (735)
T ss_pred             HHHHHHHHHHHHHHhCcccCccccccchhhhhcccccccccccCCcchhhhHHHHHHHHHHHhcCchHHHHHHHHHHHHH
Confidence            7777666554433333334343221111111111111111 001 00  0   0  124568899998888888888888


Q ss_pred             HHHHHHHhHHHHHHHHhCCCccchhhHhhhhH-HHHHHHHHHHHHHHHHHHHc
Q 021674          133 GTFILLTWMPTYYNQVLHFNLTESGLFCVLPW-LTMAFSANLGGWIADTLVSK  184 (309)
Q Consensus       133 ~~~~~~~wlp~~l~~~~g~s~~~~g~~~~~~~-~~~~ig~~~~G~l~dr~~~r  184 (309)
                      .+-++.+++|.||++.+|.+...+.++..... -++.+|.+++|++.-|+.-+
T Consensus       407 ~~~G~~tFlPKyLE~Qfg~sas~An~l~G~i~vp~~~~Gi~lGG~iikkfkl~  459 (735)
T KOG3626|consen  407 AITGYITFLPKYLETQFGISASLANILTGSIGVPAAAVGIFLGGLIIKKFKLS  459 (735)
T ss_pred             HHhhHHHhhHHHHHHHcCCCHHHHHHHhhhhhhhhhhhhhhccceeeeeeccc
Confidence            89999999999999999999999999885554 46778999999999988543

>PRK11652 emrD multidrug resistance protein D; Provisional

Probab=99.19  E-value=1.5e-09  Score=99.70  Aligned_cols=162  Identities=11%  Similarity=-0.033  Sum_probs=97.5

Q ss_pred             HHHHHHHHHHHHhHHHHHHHHhCCCccchhhHhhhhHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHhhHHHHHHH
Q 021674          128 FCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFL  207 (309)
Q Consensus       128 ~~~~~~~~~~~~wlp~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~~~~~~~~~~~  207 (309)
                      .+...........+|.+. +++|.|+.+.++......++..++.++.|+++||+|||+..        . .+.....+..
T Consensus        18 ~~~~~~~~~~~p~~~~i~-~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~grr~~~--------~-~~~~~~~~~~   87 (394)
T PRK11652         18 AVGQMAQTIYVPAIADMA-RDLNVREGAVQAVMAAYLLTYGLSQLFYGPLSDRVGRRPVI--------L-VGMSIFILGT   87 (394)
T ss_pred             HHHHHHHHHHhccHHHHH-HHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHHH--------H-HHHHHHHHHH
Confidence            333333444445566655 56899999999999999999999999999999999976311        1 1111111111


Q ss_pred             HHhhccCchHHHHH-HHHHHHhhhhhhhcchhhhhhc-cCCCchHHHHHHHhHhHhhhhhHHHhHHHhhcccCCchHHHH
Q 021674          208 TQLSHVDSPAMAVL-CMACSQGTDAFSQSGLYSNHQD-IAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSWDDVFK  285 (309)
Q Consensus       208 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-~~~~~~g~a~~~~~~~~~lgg~i~~~~~g~l~~~~~~~~~~~  285 (309)
                      ......++...... ....+.+.+.. .........| .++++++.+.+..+....++..++|.+.+.+.++.+|+..|.
T Consensus        88 ~~~~~~~~~~~l~~~~~~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~g~~~~f~  166 (394)
T PRK11652         88 LVALFAHSLTVLIAASAIQGLGTGVG-GVMARTLPRDLYEGTQLRHANSLLNMGILVSPLLAPLIGGLLTTLFGWRACYL  166 (394)
T ss_pred             HHHHHHccHHHHHHHHHHHHhhhhHH-HHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccChHHHHH
Confidence            11112223322222 12222221111 1111111122 344678888888888889999999999999988888999998


Q ss_pred             HHHHHHHHHHHHHHh
Q 021674          286 VSVGLYLVGTAVWNL  300 (309)
Q Consensus       286 ~~~~~~~~~~~~~~~  300 (309)
                      +.+++.++..+....
T Consensus       167 ~~~~~~~~~~~~~~~  181 (394)
T PRK11652        167 FLLLLGAGVTFSMAR  181 (394)
T ss_pred             HHHHHHHHHHHHHHH
Confidence            876655544433333

>PRK10091 MFS transport protein AraJ; Provisional

Probab=99.18  E-value=1.4e-09  Score=99.58  Aligned_cols=169  Identities=12%  Similarity=0.064  Sum_probs=109.5

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhCCCccchhhHhhhhHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHH
Q 021674          118 PPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQS  197 (309)
Q Consensus       118 ~~~~~~~~~~~~~~~~~~~~~~wlp~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~  197 (309)
                      +..+.+....++.....+.....+|.+. +++|+|..+.++..+...++..++.+..|+++||++||+.        +. 
T Consensus         3 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~g~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~--------~~-   72 (382)
T PRK10091          3 KVILSLALGTFGLGMAEFGIMGVLTELA-HDVGISIPAAGHMISYYALGVVVGAPIIALFSSRYSLKHI--------LL-   72 (382)
T ss_pred             chHHHHHHHHHHHHhhHHHHHhChHHHH-HHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHHccCccHHH--------HH-
Confidence            3455566666776667777778887755 5689999999999999999999999999999999997631        11 


Q ss_pred             HhhHHHHHHHHHhhccCchHHHHHH-HHHHHhhhhhhhcchhhhhhc-cCCCchHHHHHHHhHhHhhhhhHHHhHHHhhc
Q 021674          198 IGFLGPAFFLTQLSHVDSPAMAVLC-MACSQGTDAFSQSGLYSNHQD-IAPRYSGVLLGLSNTAGVLAGVFGTAATGYIL  275 (309)
Q Consensus       198 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~-~~~~~~g~a~~~~~~~~~lgg~i~~~~~g~l~  275 (309)
                      .+.....+........++.+..... ...+.+.+... ........+ .++++++.+.+..+....++..++|.+.+.+.
T Consensus        73 ~~~~~~~~~~~l~~~~~~~~~l~~~r~l~G~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~  151 (382)
T PRK10091         73 FLVALCVIGNAMFTLSSSYLMLAIGRLVSGFPHGAFF-GVGAIVLSKIIKPGKVTAAVAGMVSGMTVANLLGIPLGTYLS  151 (382)
T ss_pred             HHHHHHHHHHHHHHHhCcHHHHHHHHHHHHhhhHHHH-HHHHHHHHHhCChHHhhHHHHHHHHHHHHHHHHhccHHHHHh
Confidence            1111111111112223344333222 22222222111 111112223 34457888899888888999999999999998


Q ss_pred             ccCCchHHHHHHHHHHHHHHHH
Q 021674          276 QHGSWDDVFKVSVGLYLVGTAV  297 (309)
Q Consensus       276 ~~~~~~~~~~~~~~~~~~~~~~  297 (309)
                      +..+|+..|.+.+++.++..+.
T Consensus       152 ~~~gwr~~f~~~~~~~~~~~~~  173 (382)
T PRK10091        152 QEFSWRYTFLLIAVFNIAVLAS  173 (382)
T ss_pred             hhccHHHHHHHHHHHHHHHHHH
Confidence            8888999998877666555443

>TIGR00897 2A0118 polyol permease family

Probab=99.17  E-value=1.9e-09  Score=99.48  Aligned_cols=159  Identities=11%  Similarity=0.040  Sum_probs=98.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhCCCccchhhHhhhhHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHH
Q 021674          119 PVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSI  198 (309)
Q Consensus       119 ~~~~~~~~~~~~~~~~~~~~~wlp~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~~  198 (309)
                      .+....+..++...+.+....++|++++ ++|+|..+.++......++..++.++.|+++||++||+...       ...
T Consensus        14 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~-~~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~dr~g~k~~l~-------~~~   85 (402)
T TIGR00897        14 NLLWGYIGVVVFMTGDGLEQGWLSPFLK-ALGLSPQQSASAFTLYGIAAAISAWISGVVAEIIGPLKTMM-------IGL   85 (402)
T ss_pred             hhhHHHHHHHHHHHhhhhHHHhHHHHHH-HhCCCHHHhHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHH-------HHH
Confidence            3445566666667777777889999995 57999999999999999999999999999999999874211       111


Q ss_pred             hhHHHH-HHHHHhhc-cCchHHHHH-HHHHHHhhhhhhhcchhhhh-hccCCCchHHHHHHHhHhHhhhh-hHHHhHHHh
Q 021674          199 GFLGPA-FFLTQLSH-VDSPAMAVL-CMACSQGTDAFSQSGLYSNH-QDIAPRYSGVLLGLSNTAGVLAG-VFGTAATGY  273 (309)
Q Consensus       199 ~~~~~~-~~~~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~-~~~~~~~~g~a~~~~~~~~~lgg-~i~~~~~g~  273 (309)
                      ...... ........ ..+...... ....+.+.... ........ +..++++++.+.|+.++..++|. .++|.+.+.
T Consensus        86 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~i~G~g~~~~-~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~g~~~~~~  164 (402)
T TIGR00897        86 LLWCVGHAAFIVFGLGHANYPLILLFYGIRGLGYPLF-AYSFLVWVVYNTKQDNLSSAVGWFWAVYSIGIGVFGSYYSSY  164 (402)
T ss_pred             HHHHHHHHHHHHHhccCccHHHHHHHHHHHHcchHHH-HhHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            111111 11111111 122222221 11122222111 11111222 33467789999999999989886 578999899


Q ss_pred             hcccCCchHHHHH
Q 021674          274 ILQHGSWDDVFKV  286 (309)
Q Consensus       274 l~~~~~~~~~~~~  286 (309)
                      +.+..+|...++.
T Consensus       165 l~~~~g~~~~~~~  177 (402)
T TIGR00897       165 AIPAFGEMNTLWS  177 (402)
T ss_pred             cccccchHHHHHH
Confidence            8887665444443

This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.

>TIGR00712 glpT glycerol-3-phosphate transporter

Probab=99.17  E-value=6.2e-10  Score=103.87  Aligned_cols=175  Identities=10%  Similarity=-0.008  Sum_probs=102.0

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhCCCccchhhHhhhhHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHH
Q 021674          118 PPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQS  197 (309)
Q Consensus       118 ~~~~~~~~~~~~~~~~~~~~~~wlp~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~  197 (309)
                      +.++...+.+.+.+.....+..++| ++++ +|+|+.+.++......++..++.+..|+++||+++|+.....      .
T Consensus        27 ~~~~~~~~~~~~~~~~~~~~~~~~p-~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~~~~~~~~------~   98 (438)
T TIGR00712        27 QVFLGIFFGYAAYYLVRKNFALAMP-YLVE-QGFSKGELGFALSAISIAYGFSKFIMGSVSDRSNPRVFLPAG------L   98 (438)
T ss_pred             HHHHHHHHHHHHHHHHhccHHhhhH-HHHH-cCCCHhHhHHHHHHHHHHHHHhhhccchhhhccCCceehHHH------H
Confidence            3333333433443333444556666 4555 599999999999999999999999999999999976422110      0


Q ss_pred             HhhHHHHHHHHHhhc-cCchHHHHH-HHHHHHhhhhhhhcchhhhh-hccCCCchHHHHHHHhHhHhhhhhHHHhHHHhh
Q 021674          198 IGFLGPAFFLTQLSH-VDSPAMAVL-CMACSQGTDAFSQSGLYSNH-QDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYI  274 (309)
Q Consensus       198 ~~~~~~~~~~~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~-~~~~~~~~g~a~~~~~~~~~lgg~i~~~~~g~l  274 (309)
                      +......+....... .++...... ....+.+.+.. .+...... +..++++++.+.++.+...++++.++|.+.+..
T Consensus        99 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~~~g~~-~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~~~~~l~~~~  177 (438)
T TIGR00712        99 ILSAAVMLLMGFVPWATSSIAIMFVLLFLNGWFQGMG-WPPCGRTMVHWWSQSERGTIVSIWNCAHNIGGGIPPLLVLLG  177 (438)
T ss_pred             HHHHHHHHHHhccccccchHHHHHHHHHHHHHHhhcc-hHHHHHHHHHhcCcccchhHHHHHHHHHHhHhHHHHHHHHHH
Confidence            111111111111111 112211111 11222221111 11111222 234567899999999999999999999888876


Q ss_pred             cc-cCCchHHHHHHHHHHHHHHHHHHhh
Q 021674          275 LQ-HGSWDDVFKVSVGLYLVGTAVWNLF  301 (309)
Q Consensus       275 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~  301 (309)
                      .+ +.+|+..|++.+++.++..+...++
T Consensus       178 ~~~~~~w~~~f~~~~~~~~i~~~~~~~~  205 (438)
T TIGR00712       178 MAWFNDWHAALYFPAICAIIVALFAFAM  205 (438)
T ss_pred             HHHhhhhHHHHHHHHHHHHHHHHHHHHh
Confidence            55 4689999988777766655444443

This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.

>PF03825 Nuc_H_symport: Nucleoside H+ symporter

Probab=99.17  E-value=1.5e-08  Score=93.26  Aligned_cols=184  Identities=15%  Similarity=0.189  Sum_probs=105.1

Q ss_pred             hHhhcchHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhCCCccchhhHhhhhHHHHHHHHHHHHHHHHHHHHcCCChhhH
Q 021674          112 GLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTV  191 (309)
Q Consensus       112 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~wlp~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~  191 (309)
                      .+++|||++....+..++.....-...++.+.|+++.-|++....+....+..++=.+.....+++..|++.|       
T Consensus       201 ~~llk~~~~~~Fll~~~l~~~~~~~~~~f~~~yl~~~gg~~~~~~g~~~~l~~~aEi~~f~~~~~~~~r~g~~-------  273 (400)
T PF03825_consen  201 LKLLKNPRFLVFLLAAFLIGISHAAYYTFFSIYLQELGGYSGSTIGILWALGVVAEIPFFFFSGRFLKRFGIK-------  273 (400)
T ss_pred             HHHhcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCHH-------
Confidence            4689999988777777776667777889999999876557777777766655555555555666666666543       


Q ss_pred             HHHHHHHhhHHHHHHHHHhhcc-CchHHHHHHHHH---HHh--hhhhhhcchhhh-hhccCCCchHHHHHHHhHhH-hhh
Q 021674          192 RKIMQSIGFLGPAFFLTQLSHV-DSPAMAVLCMAC---SQG--TDAFSQSGLYSN-HQDIAPRYSGVLLGLSNTAG-VLA  263 (309)
Q Consensus       192 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~---~~~--~~~~~~~~~~~~-~~~~~~~~~g~a~~~~~~~~-~lg  263 (309)
                       +.+ .++....++=....... ++.+........   ..+  .+.+ ....... ....+++.++++-++.+... .+|
T Consensus       274 -~ll-~~a~~~~~vR~~l~a~~~~~~~~~~~~~~l~q~lhG~tf~~~-~~a~~~yi~~~~p~~~~at~Q~l~~~~~~Glg  350 (400)
T PF03825_consen  274 -WLL-LLALVAYAVRWLLYAYFSDPWPFIVALQLLGQLLHGLTFGLF-HAASVRYIDRIAPPELRATAQGLYSALSFGLG  350 (400)
T ss_pred             -HHH-HHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHhhhhHHHHHH-HHHHHHHHHHhCCccchHHHHHHHHHHHhhHH
Confidence             122 22222221111111122 222222211111   111  1111 1111222 23346678899999888765 589


Q ss_pred             hhHHHhHHHhhcccCC------chHHHHHHHHHHHHHHHHHHhh-cCCc
Q 021674          264 GVFGTAATGYILQHGS------WDDVFKVSVGLYLVGTAVWNLF-STGE  305 (309)
Q Consensus       264 g~i~~~~~g~l~~~~~------~~~~~~~~~~~~~~~~~~~~~~-~~~~  305 (309)
                      +.+|..+.|++.|+.+      |...+.+.+++.++..+.+.++ .++|
T Consensus       351 ~~iG~~igG~l~~~~g~~~~~~~~~~~~v~a~~~~~~~~~f~~~fk~~~  399 (400)
T PF03825_consen  351 GAIGSLIGGWLYDAFGARGMFDWSAVFLVFAVMALVILVLFVILFKPKH  399 (400)
T ss_pred             HHHHHHHHHHHHHHhcchhhhhHHHHHHHHHHHHHHHHHHHHhhccCCC
Confidence            9999999999999843      4456666666555555444444 4343

>PRK15403 multidrug efflux system protein MdtM; Provisional

Probab=99.16  E-value=1.9e-09  Score=99.90  Aligned_cols=143  Identities=11%  Similarity=0.052  Sum_probs=92.9

Q ss_pred             HHHHhCCCccchhhHhhhhHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHhhHHHHHHHHHhhccCchHHHHHH-H
Q 021674          145 YNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSPAMAVLC-M  223 (309)
Q Consensus       145 l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~  223 (309)
                      +.+++|.|..+.+...+...++..++.+..|+++||+|||+..        . .+..............++....++. +
T Consensus        42 i~~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l--------~-~~~~~~~~~~~~~~~a~~~~~l~~~r~  112 (413)
T PRK15403         42 VVRDFNADVSLAPASVSLYLAGGMALQWLLGPLSDRIGRRPVL--------I-TGALIFTLACAATLFTTSMTQFLIARF  112 (413)
T ss_pred             HHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhHHHHHcCchHHH--------H-HHHHHHHHHHHHHHHcCCHHHHHHHHH
Confidence            4567899999999999999999999999999999999987421        1 1111111111111223344333222 2


Q ss_pred             HHHHhhhhhhhcchhhhhhcc-CCCchHHHHHHHhHhHhhhhhHHHhHHHhhcccCCchHHHHHHHHHHHHHHHH
Q 021674          224 ACSQGTDAFSQSGLYSNHQDI-APRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSWDDVFKVSVGLYLVGTAV  297 (309)
Q Consensus       224 ~~~~~~~~~~~~~~~~~~~~~-~~~~~g~a~~~~~~~~~lgg~i~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~  297 (309)
                      ..+.+.+ ......+....|. ++++++.+.++.+....++..++|.+.+.+.++.+|+..|.+.+++.+++.+.
T Consensus       113 l~Gi~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lg~~l~~~~gw~~~f~~~~~~~~i~~~~  186 (413)
T PRK15403        113 IQGTSIC-FIATVGYVTVQEAFGQTKGIKLMAIITSIVLVAPIIGPLSGAALMHFVHWKVLFAIIAVMGLIAFVG  186 (413)
T ss_pred             HHHHHHH-HHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHH
Confidence            2222221 1111112223344 44678888999999999999999999999988888999998877776666544

>TIGR00891 2A0112 putative sialic acid transporter

Probab=99.16  E-value=3.4e-09  Score=97.06  Aligned_cols=164  Identities=8%  Similarity=0.040  Sum_probs=101.4

Q ss_pred             HHHHHHHHHHHHHHHHHhHHHHHHHHhCCCccchhhHhhhhHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHhhHH
Q 021674          123 LIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLG  202 (309)
Q Consensus       123 ~~~~~~~~~~~~~~~~~wlp~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~~~~~~  202 (309)
                      ..+.+++.....+......|. +++++|+|..+.++..+...++..++.++.|+++||+|||+.        +. .+...
T Consensus        17 ~~~~~~~~~~~~~~~~~~~~~-l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~--------~~-~~~~~   86 (405)
T TIGR00891        17 AWLGWLLDAFDFFLVALVLAE-VAGEFGLTTVDAASLISAALISRWFGALMFGLWGDRYGRRLP--------MV-TSIVL   86 (405)
T ss_pred             HHHHHHHHHHHHHHHHHHHHH-HHHHhCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhccHHH--------HH-HHHHH
Confidence            344445555555555566665 567789999999999999999999999999999999997731        11 11111


Q ss_pred             HHHHHHHhhccCchHHHHHH-HHHHHhhhhhhhcchhhhh-hccCCCchHHHHHHHhHhHhhhhhHHHhHHHhhcccCC-
Q 021674          203 PAFFLTQLSHVDSPAMAVLC-MACSQGTDAFSQSGLYSNH-QDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGS-  279 (309)
Q Consensus       203 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~-~~~~~~~~g~a~~~~~~~~~lgg~i~~~~~g~l~~~~~-  279 (309)
                      ..+........++....... +..+.+.+.. ........ +..++++++.+.++.+....+|..+++.+.+.+.+..+ 
T Consensus        87 ~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~-~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~~  165 (405)
T TIGR00891        87 FSAGTLACGFAPGYITMFIARLVIGIGMGGE-YGSSAAYVIESWPKHLRNKASGLLISGYAVGAVVAAQVYSLVVPVWGD  165 (405)
T ss_pred             HHHHHHHHHHhccHHHHHHHHHHHHhhhhhh-hHHHHHHHHHhCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCc
Confidence            11111111122233322221 2222222211 11112222 23455789999999999999999999999999888744 


Q ss_pred             -chHHHHHHHHHHHHHHHH
Q 021674          280 -WDDVFKVSVGLYLVGTAV  297 (309)
Q Consensus       280 -~~~~~~~~~~~~~~~~~~  297 (309)
                       |+..|.+.+...++..+.
T Consensus       166 ~w~~~f~~~~~~~~~~~~~  184 (405)
T TIGR00891       166 GWRALFFISILPIIFALWL  184 (405)
T ss_pred             cHHHHHHHHHHHHHHHHHH
Confidence             988887765555544433

>PRK15462 dipeptide/tripeptide permease D; Provisional

Probab=99.16  E-value=2.8e-08  Score=93.41  Aligned_cols=63  Identities=16%  Similarity=0.289  Sum_probs=56.2

Q ss_pred             cccccchhhHHHHHhccCCCc--chhHHHHHHHhhhhhHHHHhhhhHHHHhhhcCCcchhHhhhh
Q 021674            3 IGEGVAMPAMNNILSKWVPVA--ERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGS   65 (309)
Q Consensus         3 ig~g~~~p~~~~~i~~~~p~~--~rg~~~g~~~~~~~~g~~lg~~l~~~l~~~~gWr~~F~i~~~   65 (309)
                      +|.|...|...++++|.||++  +|.+..++.+.+.++|+.++|.+.+++.+++|||+.|.+.++
T Consensus       112 iG~G~~~~~~~alv~elfp~~~~~R~sgf~i~Y~~~nlG~~iap~l~g~L~~~~Gw~~~F~iaai  176 (493)
T PRK15462        112 CGYGLFKSNVSCLLGELYEPTDPRRDGGFSLMYAAGNVGSIIAPIACGYAQEEYSWAMGFGLAAV  176 (493)
T ss_pred             HhcccccccHHHHHHHHCCCCCccccceehHHHHHHHHHHHHHHHHHHHHHhhhChHHHHHHHHH
Confidence            466777788889999999976  799999999999999999999999999999999999997543

>PRK03633 putative MFS family transporter protein; Provisional

Probab=99.15  E-value=4.1e-09  Score=96.45  Aligned_cols=151  Identities=15%  Similarity=0.050  Sum_probs=99.4

Q ss_pred             chHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhCCCccchhhHhhhhHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHH
Q 021674          117 KPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQ  196 (309)
Q Consensus       117 ~~~~~~~~~~~~~~~~~~~~~~~wlp~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~  196 (309)
                      ++.++.+....++...........+|.|+++ +|.|..+.|+..+...++..++.++.|+++||+|+|+.        +.
T Consensus         5 ~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~-~~~s~~~~G~~~s~~~l~~~~~~~~~g~l~dr~g~k~~--------~~   75 (381)
T PRK03633          5 TRPVLLLLCGLLLLTLAIAVLNTLVPLWLAQ-EHLPTWQVGVVSSSYFTGNLVGTLLAGYVIKRIGFNRS--------YY   75 (381)
T ss_pred             HHHHHHHHHHHHHHHHhhhhHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHH--------HH
Confidence            3456777777777777777788999999975 69999999999999999999999999999999998731        11


Q ss_pred             HHhhHHHHHHHHHhhccCchHHHHHH-HHHHHhhhhhhhcchhh-hhhccCCCchHHHHHHHhHhHhhhhhHHHhHHHhh
Q 021674          197 SIGFLGPAFFLTQLSHVDSPAMAVLC-MACSQGTDAFSQSGLYS-NHQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYI  274 (309)
Q Consensus       197 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~-~~~~~~~~~~g~a~~~~~~~~~lgg~i~~~~~g~l  274 (309)
                       .+..............++....... ...+.+.+.. .+.... ...+.++++++.+.+..+...++|..++|.+.+.+
T Consensus        76 -~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l  153 (381)
T PRK03633         76 -LASLIFAAGCAGLGLMVGFWSWLAWRFVAGIGCAMI-WVVVESALMCSGTSRNRGRLLAAYMMVYYLGTVLGQLLVSKV  153 (381)
T ss_pred             -HHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHH-HHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence             1111111111111222333332222 2222222211 111111 12334556789999999999999999999999998


Q ss_pred             cccC
Q 021674          275 LQHG  278 (309)
Q Consensus       275 ~~~~  278 (309)
                      .+..
T Consensus       154 ~~~~  157 (381)
T PRK03633        154 STEL  157 (381)
T ss_pred             cccc
Confidence            7753

>PRK10213 nepI ribonucleoside transporter; Reviewed

Probab=99.14  E-value=3.9e-09  Score=97.19  Aligned_cols=154  Identities=12%  Similarity=0.051  Sum_probs=98.5

Q ss_pred             HHHHHHHhHHHHHHHHhCCCccchhhHhhhhHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHhhHHHHHHHHHhhc
Q 021674          133 GTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSH  212 (309)
Q Consensus       133 ~~~~~~~wlp~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~  212 (309)
                      ..|.....+|.+. +++|+|+.+.++..+...++..++.++.|+++||+|||+.        +. .+.............
T Consensus        35 ~~~~~~~~l~~~~-~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~grr~~--------~~-~~~~~~~~~~~~~~~  104 (394)
T PRK10213         35 VEFLPVSLLTPMA-QDLGISEGVAGQSVTVTAFVAMFASLFITQTIQATDRRYV--------VI-LFAVLLTLSCLLVSF  104 (394)
T ss_pred             HHHHHHhhHHHHH-HHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccCcHHH--------HH-HHHHHHHHHHHHHHH
Confidence            3444445567655 5689999999999999999999999999999999997631        11 111111111111122


Q ss_pred             cCchHHHHHH-HHHHHhhhhhhhcchhhhhhc-cCCCchHHHHHHHhHhHhhhhhHHHhHHHhhcccCCchHHHHHHHHH
Q 021674          213 VDSPAMAVLC-MACSQGTDAFSQSGLYSNHQD-IAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSWDDVFKVSVGL  290 (309)
Q Consensus       213 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~-~~~~~~g~a~~~~~~~~~lgg~i~~~~~g~l~~~~~~~~~~~~~~~~  290 (309)
                      .++.+....+ ...+.+.+.. .+.......| .++++++.+.++.+...+++..++|.+.+.+.+..+|+..|.+.+.+
T Consensus       105 ~~~~~~l~~~r~l~G~~~g~~-~~~~~~~i~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~l  183 (394)
T PRK10213        105 ANSFSLLLIGRACLGLALGGF-WAMSASLTMRLVPPRTVPKALSVIFGAVSIALVIAAPLGSFLGELIGWRNVFNAAAVM  183 (394)
T ss_pred             HChHHHHHHHHHHHHHhhHHH-HHHHHHHHHHHcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHH
Confidence            2333333222 2222222211 1111222223 45678999999999999999999999999999988899999887666


Q ss_pred             HHHHHHH
Q 021674          291 YLVGTAV  297 (309)
Q Consensus       291 ~~~~~~~  297 (309)
                      .+++.+.
T Consensus       184 ~~~~~l~  190 (394)
T PRK10213        184 GVLCIFW  190 (394)
T ss_pred             HHHHHHH
Confidence            6555433

>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]

Probab=99.14  E-value=5.7e-11  Score=107.25  Aligned_cols=291  Identities=15%  Similarity=0.172  Sum_probs=167.8

Q ss_pred             CCcccccchhhHHHHHhccCCCcchhHHHHHHHhhhhhHHHHhhhhHHHHhhhc---------------CCcchhHhhhh
Q 021674            1 MGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRF---------------GWPSVFYSFGS   65 (309)
Q Consensus         1 ~Gig~g~~~p~~~~~i~~~~p~~~rg~~~g~~~~~~~~g~~lg~~l~~~l~~~~---------------gWr~~F~i~~~   65 (309)
                      .|+|.|+.+|.+.++.+|...+++||..++.+.+-...|...|.+++-.+...+               =||-.|-+-.+
T Consensus       154 LGiGIGGDYPlSAtI~SE~an~~~RGa~iaavFa~Qg~GilaG~ivt~Iv~~~fe~~~~~~~~~~~ld~vWRl~~glg~v  233 (538)
T KOG0252|consen  154 LGIGIGGDYPLSATIMSESANKKTRGAFIAAVFAMQGFGILAGGIVALIVSAIFEKIFNGPSTYPHLDGVWRIIFGLGAV  233 (538)
T ss_pred             hhccccCCCcchHHHhhhhhhhccccceeEEEEEecchhHhhccHHHHHHHHHHhccCCCCCCchHHHHHHHHHHHHHHH
Confidence            489999999999999999999999999999999998888888877665543211               29999997444


Q ss_pred             HHHHHHHHHHhhcccCCCCCC----CCCHHHH---HHHHh-----ccCCCC-CCCCCC---hhHhhcc---hHHHHHHHH
Q 021674           66 LGTVWFTVWLSKAHSSPAEDP----QLRPAEK---KLIVS-----SCASKE-PVKTIP---WGLILSK---PPVWALIVS  126 (309)
Q Consensus        66 ~~~v~~~~~~~~~~~~p~~~~----~~~~~~~---~~~~~-----~~~~~~-~~~~~~---~~~l~~~---~~~~~~~~~  126 (309)
                      ++++. ..+-...||+++-+.    +.+...+   +++..     +..+.. +.+...   +...+.+   +.+......
T Consensus       234 pa~~~-ly~Rl~M~Et~~Y~al~~~~~~~a~~d~~k~~~~~~~~~~~~~~~~~~~~~~~~~F~~~f~~~hg~~Llgt~~~  312 (538)
T KOG0252|consen  234 PALLV-LYFRLKMPETARYTALVSKKLKQAAGDMKKVLSVDIEAESTAESDVPPPSNSFGLFSRLFLRWHGKHLLGTAGT  312 (538)
T ss_pred             HHHHH-HHhhhcCCcchhHHHHhhcCHhhhhhccccccccccchhhccccCCCCcccccchHHHHHHHHHHHHHHHHHHH
Confidence            45443 333334566554221    1000000   00000     000000 000111   1122222   223334555


Q ss_pred             HHHHHHHHHHHHHhHHHHHHHHhCCCccchhh-----Hhh---hhHH-HHHHHHHHHHHHHHHHHHcCCChhhHHHHHHH
Q 021674          127 HFCHNWGTFILLTWMPTYYNQVLHFNLTESGL-----FCV---LPWL-TMAFSANLGGWIADTLVSKGLSVTTVRKIMQS  197 (309)
Q Consensus       127 ~~~~~~~~~~~~~wlp~~l~~~~g~s~~~~g~-----~~~---~~~~-~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~  197 (309)
                      .|....++|+...+.-..+++ .|+.+.+..+     ...   +..+ ....|..+..+++|++||+.         ...
T Consensus       313 WFllDiafy~~nL~~s~I~~~-ig~~~~~~~~~~~~~vA~~~~iia~~~~vPGyw~tv~~id~iGRk~---------iq~  382 (538)
T KOG0252|consen  313 WFLLDIAFYGQNLFQSVIFSA-IGVIPSANTYHELFKVAEGNLIIAVCSTVPGYWFTVYFIDIIGRKY---------IQL  382 (538)
T ss_pred             HHhhhhhhhccccHHHHHHHh-hccCCCcchHHHHHHHHHHHHHHHHHccCCceeEEEEEeehhhhHH---------HHH
Confidence            677778899999888888865 5887666555     111   1111 22235556778999999762         222


Q ss_pred             HhhHHHHHHHHHhh-ccCchH---HHHHHHHHHHhhhhhh-hcchhhhhhc-cCCCchHHHHHHHhHhHhhhhhHHHhHH
Q 021674          198 IGFLGPAFFLTQLS-HVDSPA---MAVLCMACSQGTDAFS-QSGLYSNHQD-IAPRYSGVLLGLSNTAGVLAGVFGTAAT  271 (309)
Q Consensus       198 ~~~~~~~~~~~~~~-~~~~~~---~~~~~~~~~~~~~~~~-~~~~~~~~~~-~~~~~~g~a~~~~~~~~~lgg~i~~~~~  271 (309)
                      .++....++..... ..++..   ..+++..+...++-+. +...+....| .+.+.|++.-|+....+.+|++++....
T Consensus       383 ~GF~~~~i~~~~~~~~y~~~~~~~Gf~v~y~l~~ff~NFGPn~ttfivpaE~FParvR~t~hGIsAA~GK~GAivg~~~F  462 (538)
T KOG0252|consen  383 MGFFIMTIFFFVIAGPYNQLENTIGFVVLYSLTFFFGNFGPNATTFIVPAEIFPARVRSTCHGISAASGKAGAIVGAFGF  462 (538)
T ss_pred             hhHHHHHHHHHHHcCCcccccccCceeehHHHHHHHHhcCCCceeEEeehhhchHHHhhhhhhHHHHhccchHHHHHHHh
Confidence            33333332322222 122111   1111111111111111 1112222233 3457899999999999999999999999


Q ss_pred             Hhhcc-----cCCchHHHHHHHHHHHHHHHHHHhhc
Q 021674          272 GYILQ-----HGSWDDVFKVSVGLYLVGTAVWNLFS  302 (309)
Q Consensus       272 g~l~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~  302 (309)
                      ..+.+     ..+...++++.+++..++.++-+++.
T Consensus       463 ~~~t~~~yp~~~g~~~v~~i~~~~~~~gi~~T~l~p  498 (538)
T KOG0252|consen  463 LYLTDHNYPPNIGVRNVFIILAGCMLLGILFTLLIP  498 (538)
T ss_pred             hHhhhccCCccccchHHHHHHHHHHHHhHheeEEee
Confidence            99988     34677889998888888877766664

>TIGR00890 2A0111 Oxalate/Formate Antiporter

Probab=99.14  E-value=1.1e-09  Score=99.11  Aligned_cols=157  Identities=15%  Similarity=0.130  Sum_probs=97.9

Q ss_pred             HHHHHHhHHHHHHHHhCCCccchhhHhhhhHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHhhHHHHHHHHHhhcc
Q 021674          134 TFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHV  213 (309)
Q Consensus       134 ~~~~~~wlp~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  213 (309)
                      .|....++| ++++++|+|..+.+...+...++..++.+..|+++||+|||+....         +.....+........
T Consensus        19 ~~~~~~~~~-~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~d~~G~r~~~~~---------~~~~~~~~~~~~~~~   88 (377)
T TIGR00890        19 VYTWTLLAP-PLGRYFGVGVTAVAIWFTLLLIGLAMSMPVGGLLADKFGPRAVAML---------GGILYGLGFTFYAIA   88 (377)
T ss_pred             HhhhhhHHH-HHHHHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHcCccchhHH---------hHHHHHHHHHHHHHH
Confidence            444445555 4556789999999999999999999999999999999998753221         111111111111112


Q ss_pred             CchHHHHHH-HHHHHhhhhhhhcchhhhhhccCCCchHHHHHHHhHhHhhhhhHHHhHHHhhcccCCchHHHHHHHHHHH
Q 021674          214 DSPAMAVLC-MACSQGTDAFSQSGLYSNHQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSWDDVFKVSVGLYL  292 (309)
Q Consensus       214 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~g~a~~~~~~~~~lgg~i~~~~~g~l~~~~~~~~~~~~~~~~~~  292 (309)
                      ++....... ...+.+.+.. .........+..|++|+.+.++.+....+|..+++++.+.+.+..+|+..|.+.+++.+
T Consensus        89 ~~~~~~~~~~~~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~f~~~~~~~~  167 (377)
T TIGR00890        89 DSLAALYLTYGLASAGVGIA-YGIALNTAVKWFPDKRGLASGIIIGGYGLGSFILSPLITSVINLEGVPAAFIYMGIIFL  167 (377)
T ss_pred             HHHHHHHHHHHHHhHHHHHH-HHhHHHHHHHHcCcccHHHHHHHHHhcchhHhHHHHHHHHHHhcccHHHHHHHHHHHHH
Confidence            222222221 1222222211 11112222334467899999999998889888888888888888889999988777766


Q ss_pred             HHHHHHHhh
Q 021674          293 VGTAVWNLF  301 (309)
Q Consensus       293 ~~~~~~~~~  301 (309)
                      +..+....+
T Consensus       168 ~~~~~~~~~  176 (377)
T TIGR00890       168 LVIVLGAFL  176 (377)
T ss_pred             HHHHHHHHh
Confidence            655444433

>PRK10473 multidrug efflux system protein MdtL; Provisional

Probab=99.14  E-value=4.8e-09  Score=96.25  Aligned_cols=165  Identities=13%  Similarity=0.056  Sum_probs=101.9

Q ss_pred             HHHHHHHHHHHHHHHHHhHHHHHHHHhCCCccchhhHhhhhHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHhhHH
Q 021674          123 LIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLG  202 (309)
Q Consensus       123 ~~~~~~~~~~~~~~~~~wlp~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~~~~~~  202 (309)
                      ..........+.......+|.+. +++|.|..+.+...+...++..++.++.|+++||+|||+.        +. .+...
T Consensus         8 ~~~~~~~~~~~~~~~~~~lp~~~-~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~--------l~-~~~~~   77 (392)
T PRK10473          8 SFALVLLYPAGIDMYLVGLPRIA-ADLNASEAQLHIAFSVYLAGMAAAMLFAGKIADRSGRKPV--------AI-PGAAL   77 (392)
T ss_pred             HHHHHHHHHHHHHHHhhhHHHHH-HHhCCCHHHHHHHHHHHHHHHHHHHHhHhHHHHHhCChHH--------HH-HHHHH
Confidence            33333444444455556677665 4589999999999999999999999999999999987631        11 11111


Q ss_pred             HHHHHHHhhccCchHHHHHH-HHHHHhhhhhhhcchhhhhh-ccCCCchHHHHHHHhHhHhhhhhHHHhHHHhhcccCCc
Q 021674          203 PAFFLTQLSHVDSPAMAVLC-MACSQGTDAFSQSGLYSNHQ-DIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSW  280 (309)
Q Consensus       203 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~a~~~~~~~~~lgg~i~~~~~g~l~~~~~~  280 (309)
                      ..+........++....... ...+.+.+.. ....+.... ..++++|+.+.+..+...+++..++|.+.+.+.+..+|
T Consensus        78 ~~i~~~~~~~~~~~~~~~~~~~l~g~~~~~~-~~~~~~~i~~~~~~~~r~~~~~~~~~~~~i~~~~~~~i~~~l~~~~g~  156 (392)
T PRK10473         78 FIIASLLCSLAETSSLFLAGRFLQGIGAGCC-YVVAFAILRDTLDDRRRAKVLSLLNGITCIIPVLAPVLGHLIMLKFPW  156 (392)
T ss_pred             HHHHHHHHHHhCcHHHHHHHHHHHHhhhhHH-HHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcCh
Confidence            11111111222233222221 2222221111 111222222 34567899999999999999999999999988888789


Q ss_pred             hHHHHHHHHHHHHHHHHH
Q 021674          281 DDVFKVSVGLYLVGTAVW  298 (309)
Q Consensus       281 ~~~~~~~~~~~~~~~~~~  298 (309)
                      +..|.+.+.+.+++.+..
T Consensus       157 ~~~~~~~~~~~~i~~~~~  174 (392)
T PRK10473        157 QSLFYTMAAMGILVLLLS  174 (392)
T ss_pred             HHHHHHHHHHHHHHHHHH
Confidence            988888776665555443

>COG2270 Permeases of the major facilitator superfamily [General function prediction only]

Probab=99.13  E-value=2.4e-09  Score=96.18  Aligned_cols=277  Identities=17%  Similarity=0.154  Sum_probs=161.6

Q ss_pred             chhhHHHHHhccCCCcchhHHHHHHHhhhhhHHHHhhhhHHH---HhhhcCCcchh-------H----hhhhHHHHHH--
Q 021674            8 AMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPF---LIHRFGWPSVF-------Y----SFGSLGTVWF--   71 (309)
Q Consensus         8 ~~p~~~~~i~~~~p~~~rg~~~g~~~~~~~~g~~lg~~l~~~---l~~~~gWr~~F-------~----i~~~~~~v~~--   71 (309)
                      ...--.+++.+..++++-+|..+.-.....+|+++.....-.   ..+.-+|.-.+       -    +.+.++.+|.  
T Consensus       132 s~Vfyds~L~~~~~k~~~~riS~lg~~~gylgs~i~li~~~~~~~~~~~~~~~~~l~~l~~~~~~~~ri~~~l~A~W~li  211 (438)
T COG2270         132 SNVFYDSMLPRLTTKDNMGRISGLGWALGYLGSVILLIFVVLGFALGQQTGITIILLGLPPADGEDVRITGLLAALWWLL  211 (438)
T ss_pred             hheehhhHhhhhcCccccCcccccccccccccchHHHHHHHHHHhcccccceeEEeeccCccccccchhHHHHHHHHHHH
Confidence            334455788899999999999888888888888777655422   22223454441       0    1122222221  


Q ss_pred             --HHHHhhcccCCCCCCCCCHHHHHHHHhccCCCCCCCCCChhHhhcchHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHh
Q 021674           72 --TVWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVL  149 (309)
Q Consensus        72 --~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~wlp~~l~~~~  149 (309)
                        +-.++..+|.++..    ..+++..++.-  ++.  ...++++.++++......+.++..=+.-+..+....|-.+++
T Consensus       212 ~~iPm~~~v~~~~~~~----~~~~~~l~~g~--k~L--~~t~k~i~~~~~i~~FLiA~~~~~DGv~til~~~~~fg~~~~  283 (438)
T COG2270         212 FALPMILNVHDAEKIS----SPPPTALRNGF--KEL--KSTFKEIRGRKNLVLFLIARFFYIDGVNTILAMGGVFGAADL  283 (438)
T ss_pred             HHhHHHhccccccccc----ccchHHHHHHH--HHH--HHHHHHHhcccchHHHHHHHHHHHhhHHHHHHHHHHHHHHHc
Confidence              11222223222111    01101010000  000  113456666776666555566555577788888889999999


Q ss_pred             CCCccchhhHhhhhHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHhhHHHHHHHHHhhccCchHHHHHHHHHHHhh
Q 021674          150 HFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSPAMAVLCMACSQGT  229 (309)
Q Consensus       150 g~s~~~~g~~~~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  229 (309)
                      |+|..|..++....++.+.+|+++.|++.||++.|+....        ...+....++............++.+..+...
T Consensus       284 gls~~~lll~g~~~~vvA~lg~ii~g~Ld~rfg~k~vl~~--------~lvi~~~~~~~~~~~~~~~~f~i~gll~g~s~  355 (438)
T COG2270         284 GLSSTELLLIGIALSVVAALGAIIAGFLDERFGSKPVLMI--------GLVILSIAALYLIFLEGELDFWILGLLVGTSL  355 (438)
T ss_pred             CccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCceeehH--------HHHHHHHHHHHHHHccccHHHHHHHHHHHHhc
Confidence            9999999999999999999999999999999997743221        11111112221111211222222222222222


Q ss_pred             hhh-hhcchhhhhhccCCCchHHHHHHHhHhHhhhhhHHHhHHHhhccc-CCchHHHHHHHHHHHHHHHHHHhh
Q 021674          230 DAF-SQSGLYSNHQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQH-GSWDDVFKVSVGLYLVGTAVWNLF  301 (309)
Q Consensus       230 ~~~-~~~~~~~~~~~~~~~~~g~a~~~~~~~~~lgg~i~~~~~g~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~  301 (309)
                      +.. +.+..+- .+..++++.+...|+.|..++....++|.+.+.+.|. ++-+..+.....+.+++.++....
T Consensus       356 G~~qA~SRSy~-~~lvp~~k~~~fFglyaltgra~S~~gp~lv~v~t~iTg~~r~g~~~i~vll~iGl~~L~~v  428 (438)
T COG2270         356 GGAQASSRSYL-ARLVPKGKEGRFFGLYALTGRAASFLGPFLVAVITQITGSSRAGVLSIIVLLLIGLLLLLRV  428 (438)
T ss_pred             chHHHHHHHHH-HHhCCCccccceeehhhhhhhHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHhhHhhEEee
Confidence            211 1111121 2335667889999999999999999999999999887 556666666666666666554333

>TIGR00895 2A0115 benzoate transport

Probab=99.13  E-value=2.6e-09  Score=97.41  Aligned_cols=153  Identities=16%  Similarity=0.150  Sum_probs=95.0

Q ss_pred             HHHHHHhHHHHHHHHhCCCccchhhHhhhhHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHhhHHHHHHHHHhhcc
Q 021674          134 TFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHV  213 (309)
Q Consensus       134 ~~~~~~wlp~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  213 (309)
                      .+.....+|.+ .+++|++..+.+++.....++..++.++.|+++||++||+.        +. .+.....+........
T Consensus        33 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~--------~~-~~~~~~~~~~~~~~~~  102 (398)
T TIGR00895        33 LAAMGFAAPAI-SAEWGLDPVQLGFLFSAGLIGMAFGALFFGPLADRIGRKRV--------LL-WSILLFSVFTLLCALA  102 (398)
T ss_pred             HHHHHhhHHHH-hhccCCCHHHHHHHHHHHHHHHHHHHHHhHHHHHHhhhHHH--------HH-HHHHHHHHHHHHHHHc
Confidence            34444555554 45689999999999999999999999999999999997631        11 1111111111111122


Q ss_pred             CchHHHHH-HHHHHHhhhhhhhcchhhhhhcc-CCCchHHHHHHHhHhHhhhhhHHHhHHHhhcccCCchHHHHHHHHHH
Q 021674          214 DSPAMAVL-CMACSQGTDAFSQSGLYSNHQDI-APRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSWDDVFKVSVGLY  291 (309)
Q Consensus       214 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~a~~~~~~~~~lgg~i~~~~~g~l~~~~~~~~~~~~~~~~~  291 (309)
                      ++...... ....+.+.+ ...+...+...|. ++++++.+.++.+....+|..++|.+.+.+.+..+|+..+.+.+++.
T Consensus       103 ~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~g~~~~~~~~~~~~  181 (398)
T TIGR00895       103 TNVTQLLILRFLAGLGLG-GLMPNLNALVSEYAPKRFRGTAVGLMFCGYPIGAAVGGFLAGWLIPVFGWRSLFYVGGIAP  181 (398)
T ss_pred             cchHHHHHHHHHHhcccc-cchhhHHHHHHHHcCHHhhchhHhhHhhHHHHHHHHHHHHHHHHhhcccceeehhhhhhHH
Confidence            23322222 222222221 1112222333333 44679999999999999999999999999999888988887765444


Q ss_pred             HHHHHH
Q 021674          292 LVGTAV  297 (309)
Q Consensus       292 ~~~~~~  297 (309)
                      ++..+.
T Consensus       182 ~~~~~~  187 (398)
T TIGR00895       182 LLLLLL  187 (398)
T ss_pred             HHHHHH
Confidence            444333

>PRK14995 methyl viologen resistance protein SmvA; Provisional

Probab=99.13  E-value=5.9e-09  Score=98.89  Aligned_cols=168  Identities=17%  Similarity=0.142  Sum_probs=108.5

Q ss_pred             HHHHHHHHHHHHHHHHHhHHHHHHHHhCCCccchhhHhhhhHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHhhHH
Q 021674          123 LIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLG  202 (309)
Q Consensus       123 ~~~~~~~~~~~~~~~~~wlp~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~~~~~~  202 (309)
                      +.+..++...-...+.+-+|.+.+ ++|.+..+.++......++..++.+..|+++||+|||+.        +. .+...
T Consensus        11 ~~~~~~~~~ld~tiv~~a~p~i~~-~l~~s~~~~~~~~~~~~l~~~~~~~~~G~l~D~~Grk~~--------l~-~~~~~   80 (495)
T PRK14995         11 IVLVYIPVAIDATVLHVAAPTLSM-TLGASGNELLWIIDIYSLVMAGMVLPMGALGDRIGFKRL--------LM-LGGTL   80 (495)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHH-HhCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHH--------HH-HHHHH
Confidence            444455555555566677888864 589999999999999999999999999999999998732        11 11111


Q ss_pred             HHHHHHHhhccCchHHHHHH-HHHHHhhhhhhhcchhhh-hhcc-CCCchHHHHHHHhHhHhhhhhHHHhHHHhhcccCC
Q 021674          203 PAFFLTQLSHVDSPAMAVLC-MACSQGTDAFSQSGLYSN-HQDI-APRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGS  279 (309)
Q Consensus       203 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~-~~~~-~~~~~g~a~~~~~~~~~lgg~i~~~~~g~l~~~~~  279 (309)
                      ...........++....+.. ...+.+.+.. .+..... ..+. ++++|+.+.++......+|..++|.+.|.+.++.+
T Consensus        81 ~~~~~~~~~~a~~~~~li~~r~l~G~g~~~~-~~~~~~~l~~~~~~~~~r~~~~g~~~~~~~~g~~~gp~lgg~l~~~~g  159 (495)
T PRK14995         81 FGLASLAAAFSPTASWLIATRALLAIGAAMI-VPATLAGIRATFTEEKQRNMALGVWAAVGSGGAAFGPLVGGILLEHFY  159 (495)
T ss_pred             HHHHHHHHHHcCCHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCC
Confidence            11111112223344433332 2222222211 1112221 2333 45789999999999999999999999999999989


Q ss_pred             chHHHHHHHHHHHHHHHHHHhh
Q 021674          280 WDDVFKVSVGLYLVGTAVWNLF  301 (309)
Q Consensus       280 ~~~~~~~~~~~~~~~~~~~~~~  301 (309)
                      |++.|++...+.+++.+....+
T Consensus       160 wr~~f~i~~~~~~~~~~l~~~~  181 (495)
T PRK14995        160 WGSVFLINVPIVLVVMGLTARY  181 (495)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHh
Confidence            9999988776666555443333

>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily

Probab=99.12  E-value=3.4e-09  Score=99.81  Aligned_cols=165  Identities=16%  Similarity=0.213  Sum_probs=104.1

Q ss_pred             HHHHHHHHHHHHHHHhHHHHHHHHhCCCccchhhHhhhhHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHhhHHHH
Q 021674          125 VSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPA  204 (309)
Q Consensus       125 ~~~~~~~~~~~~~~~wlp~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~~~~~~~~  204 (309)
                      +..++...........+|.+. +++|.|..+.++......++..++.++.|+++||+|||+.        +. .+.....
T Consensus         9 ~~~~~~~~~~~~~~~~~p~~~-~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~--------~~-~~~~~~~   78 (485)
T TIGR00711         9 LGTFMAVLDSTIVNVAIPTIA-GDLGSSLSQVQWVITSYMLANAISIPLTGWLAKRFGTRRL--------FL-ISTFAFT   78 (485)
T ss_pred             HHHHHHHHHHHHHHHHHHHHH-HhcCCChhhhhHHHHHHHHHHHHHHHhHHHHHHHhCcHHH--------HH-HHHHHHH
Confidence            334444444445556677665 5689999999999999999999999999999999997631        11 1111111


Q ss_pred             HHHHHhhccCchHHHHHH-HHHHHhhhhhhhcchhhhhhc-cCCCchHHHHHHHhHhHhhhhhHHHhHHHhhcccCCchH
Q 021674          205 FFLTQLSHVDSPAMAVLC-MACSQGTDAFSQSGLYSNHQD-IAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSWDD  282 (309)
Q Consensus       205 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~-~~~~~~g~a~~~~~~~~~lgg~i~~~~~g~l~~~~~~~~  282 (309)
                      +........++....+.. ...+.+.+.. .+.......+ .++++|+.+.++.+....+|..++|.+.|++.++.+|+.
T Consensus        79 ~~~~~~~~~~~~~~l~~~~~~~G~~~~~~-~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~w~~  157 (485)
T TIGR00711        79 LGSLLCGVAPNLELMIIFRVIQGFGGGPL-IPLSFSTLLNIYPPEKRGRAMAIWGLTVLVAPALGPTLGGWIIENYHWRW  157 (485)
T ss_pred             HHHHHHhCcCCHHHHHHHHHHHHhhhhhH-HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHhhhhhccHhHhccCcCcee
Confidence            111112223333332222 2222222211 1222222333 355789999999999999999999999999999988999


Q ss_pred             HHHHHHHHHHHHHHHHHh
Q 021674          283 VFKVSVGLYLVGTAVWNL  300 (309)
Q Consensus       283 ~~~~~~~~~~~~~~~~~~  300 (309)
                      .|++.+.+.+++.+...+
T Consensus       158 ~f~~~~~~~~~~~~~~~~  175 (485)
T TIGR00711       158 IFLINVPIGIIVVVVAFF  175 (485)
T ss_pred             hhhhhhHHHHHHHHHHHH
Confidence            988876665555443333

This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.

>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional

Probab=99.11  E-value=5.3e-09  Score=96.34  Aligned_cols=163  Identities=14%  Similarity=0.129  Sum_probs=101.2

Q ss_pred             HHHHHHHHHHHHHHhHHHHHHHHhCCCccchhhHhhhhHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHhhHHHHH
Q 021674          126 SHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAF  205 (309)
Q Consensus       126 ~~~~~~~~~~~~~~wlp~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~~~~~~~~~  205 (309)
                      ..++.....+......|.+. +++|+|+.+.+++.....++..++.++.|+++||+|+|+....         +.....+
T Consensus        23 ~~~~~~~~~~~~~~~~~~~~-~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~---------~~~~~~~   92 (406)
T PRK11551         23 VALLEGLDLQSAGVAAPRMA-QEFGLDVAQMGWAFSAGILGLLPGALLGGRLADRIGRKRILIV---------SVALFGL   92 (406)
T ss_pred             HHHHHHHHHHHHHHHHHHHH-HHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHH---------HHHHHHH
Confidence            33443444455555666665 5589999999999999999999999999999999998742211         1111111


Q ss_pred             HHHHhhccCchHHHHHH-HHHHHhhhhhhhcchhhhhhc-cCCCchHHHHHHHhHhHhhhhhHHHhHHHhhcccCCchHH
Q 021674          206 FLTQLSHVDSPAMAVLC-MACSQGTDAFSQSGLYSNHQD-IAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSWDDV  283 (309)
Q Consensus       206 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~-~~~~~~g~a~~~~~~~~~lgg~i~~~~~g~l~~~~~~~~~  283 (309)
                      ........++....... ...+.+.+.. .+...+...| .++++++.+.++.+....+|+.+++.+.+.+.+..+|+..
T Consensus        93 ~~~~~~~~~~~~~~~~~~~l~G~~~~~~-~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~  171 (406)
T PRK11551         93 FSLATAQAWDFPSLLVARLLTGVGLGGA-LPNLIALTSEAVGPRLRGTAVSLMYCGVPFGGALASVIGVLAAGDAAWRHI  171 (406)
T ss_pred             HHHHHHHhccHHHHHHHHHHHHhhHHHH-HHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccCHHHH
Confidence            11111122333332222 2222222211 1112222233 3457899999999999999999999998888887889998


Q ss_pred             HHHHHHHHHHHHHHHH
Q 021674          284 FKVSVGLYLVGTAVWN  299 (309)
Q Consensus       284 ~~~~~~~~~~~~~~~~  299 (309)
                      |.+.+.+.++..+...
T Consensus       172 ~~~~~~~~~~~~~~~~  187 (406)
T PRK11551        172 FYVGGVGPLLLVPLLM  187 (406)
T ss_pred             HHHHHHHHHHHHHHHH
Confidence            8876665554443333

>TIGR00893 2A0114 d-galactonate transporter

Probab=99.11  E-value=1.9e-09  Score=97.95  Aligned_cols=150  Identities=16%  Similarity=0.201  Sum_probs=97.5

Q ss_pred             HHHHHHHhCCCccchhhHhhhhHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHhhHHHHHHHHHhhccCchHHHHH
Q 021674          142 PTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSPAMAVL  221 (309)
Q Consensus       142 p~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  221 (309)
                      .+++++++|+|..+.+++.+...++..++.++.|+++||+|||+....         +..............++......
T Consensus        17 ~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~   87 (399)
T TIGR00893        17 APMLQEDLGLSAAQYGYVFSAFSWGYVVGQFPGGWLLDRFGARKTLAV---------FIVIWGVFTGLQAFAGAYVSLYI   87 (399)
T ss_pred             HHHHHHhhCCChhhHHHHHHHHHHHHHHHHHhHHHHHHhcCcceeeHH---------HHHHHHHHHHHHHHHcCHHHHHH
Confidence            344777899999999999999999999999999999999997753221         11111111111111223332222


Q ss_pred             H-HHHHHhhhhhhhcchhhhhhcc-CCCchHHHHHHHhHhHhhhhhHHHhHHHhhcccCCchHHHHHHHHHHHHHHHHHH
Q 021674          222 C-MACSQGTDAFSQSGLYSNHQDI-APRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSWDDVFKVSVGLYLVGTAVWN  299 (309)
Q Consensus       222 ~-~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~a~~~~~~~~~lgg~i~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~  299 (309)
                      . ...+.+.+.. .+.......|. ++++|+.+.++.+...++|..++|.+.+.+.++.+|+..|.+.+++.++..+...
T Consensus        88 ~~~l~g~~~~~~-~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~  166 (399)
T TIGR00893        88 LRVLLGAAEAPF-FPGIILIVASWFPASERATAVSIFNSAQGLGGIIGGPLVGWILIHFSWQWAFIIEGVLGIIWGVLWL  166 (399)
T ss_pred             HHHHHHHHHHhh-hhHHHHHHHHhCCHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHhh
Confidence            2 2222222211 12222223343 4568999999999999999999999999999988899999887776665555444


Q ss_pred             hh
Q 021674          300 LF  301 (309)
Q Consensus       300 ~~  301 (309)
                      ++
T Consensus       167 ~~  168 (399)
T TIGR00893       167 KF  168 (399)
T ss_pred             he
Confidence            43

>TIGR00881 2A0104 phosphoglycerate transporter family protein

Probab=99.09  E-value=9.2e-10  Score=99.66  Aligned_cols=163  Identities=13%  Similarity=0.017  Sum_probs=99.8

Q ss_pred             HHHHHHHHHHHHhHHHHHHHHhCCCccchhhHhhhhHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHhhHHHHHHH
Q 021674          128 FCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFL  207 (309)
Q Consensus       128 ~~~~~~~~~~~~wlp~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~~~~~~~~~~~  207 (309)
                      ++.+.....+...+| ++++++|+|..+.+++.+...++..++.++.|+++||++||+....         +.....+..
T Consensus         5 ~~~~~~~~~~~~~~~-~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~---------~~~~~~~~~   74 (379)
T TIGR00881         5 AAYYLVRKNFALAMP-YLVEEIGLSKTDLGLLLSSFSIAYGISKFVMGSVSDRSNPRVFLPI---------GLILCAIVN   74 (379)
T ss_pred             hHHHHhHHhhhhhhH-HHHHHhCCCHhHHHHHHHHHHHHHHhhhhhhhHHHHhhCCeehhHH---------HHHHHHHHH
Confidence            333344555556666 5667789999999999999999999999999999999998753211         111111111


Q ss_pred             HHhhccCchHHHHHH-HHHHHhhhhhhhcchhhhhhcc-CCCchHHHHHHHhHhHhhhhhHHHh-HHHhhcccCCchHHH
Q 021674          208 TQLSHVDSPAMAVLC-MACSQGTDAFSQSGLYSNHQDI-APRYSGVLLGLSNTAGVLAGVFGTA-ATGYILQHGSWDDVF  284 (309)
Q Consensus       208 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~a~~~~~~~~~lgg~i~~~-~~g~l~~~~~~~~~~  284 (309)
                      ......++....++. ...+.+.+ ...+...+...+. ++++++.+.++.+....+|+.++|. +.+.+.+..+|+..|
T Consensus        75 ~~~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~  153 (379)
T TIGR00881        75 LFFGFSTSLWVMAALWALNGIFQG-MGWPPCGRTVTKWFSRSERGTWVSFWNCSHNVGGGLLPPLVLFGIAELYSWHWVF  153 (379)
T ss_pred             HHHHHhhhHHHHHHHHHHHHhhcc-ccCCchHHHHHHhcCHhhheeeEeehhccchhHHHHHHHHHHHHHHhcCCchhHH
Confidence            111122233222222 22222221 1122222223333 4467899999999999999999994 656666667899888


Q ss_pred             HHHHHHHHHHHHHHHhh
Q 021674          285 KVSVGLYLVGTAVWNLF  301 (309)
Q Consensus       285 ~~~~~~~~~~~~~~~~~  301 (309)
                      .+.+.+.++..+....+
T Consensus       154 ~~~~~~~~~~~~~~~~~  170 (379)
T TIGR00881       154 IVPGIIAIIVSLICFLL  170 (379)
T ss_pred             HHHHHHHHHHHHHHhee
Confidence            87776665554444433

>PRK15402 multidrug efflux system translocase MdfA; Provisional

Probab=99.09  E-value=7.9e-09  Score=95.32  Aligned_cols=152  Identities=13%  Similarity=0.007  Sum_probs=93.2

Q ss_pred             HHHhHHHHHHHHhCCCccchhhHhhhhHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHhhHHHHHHHHHhhccCch
Q 021674          137 LLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSP  216 (309)
Q Consensus       137 ~~~wlp~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  216 (309)
                      +..-+|. +++++|.|..+.+...+...++..++.++.|+++||++||+.        +. .+.....+........++.
T Consensus        32 ~~~~~~~-~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~dr~g~r~~--------l~-~~~~~~~~~~~~~~~~~~~  101 (406)
T PRK15402         32 IQPGMLA-VVEDFNAGAEWVPTSMTAYLAGGMFLQWLLGPLSDRIGRRPV--------ML-AGVAFFILTCLAILLAQSI  101 (406)
T ss_pred             HhcchHH-HHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHH--------HH-HHHHHHHHHHHHHHHHccH
Confidence            3334454 446789999999999999999999999999999999987631        11 1111111111111122233


Q ss_pred             HHHHHH-HHHHHhhhhhhhcchhhhhhc-cCCCchHHHHHHHhHhHhhhhhHHHhHHHhhcccCCchHHHHHHHHHHHHH
Q 021674          217 AMAVLC-MACSQGTDAFSQSGLYSNHQD-IAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSWDDVFKVSVGLYLVG  294 (309)
Q Consensus       217 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~-~~~~~~g~a~~~~~~~~~lgg~i~~~~~g~l~~~~~~~~~~~~~~~~~~~~  294 (309)
                      ...... ...+.+.+.. .+.......| .+++++..+.++.+....++..++|.+.+.+.++.+|+..|.+.+++.+++
T Consensus       102 ~~l~~~~~l~G~~~~~~-~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~~w~~~~~~~~~~~~~~  180 (406)
T PRK15402        102 EQFTLLRFLQGIGLCFI-GAVGYAAIQESFEEADAIKITALMANVALLAPLLGPLVGAALIHVLPWRGMFVLFAALAALS  180 (406)
T ss_pred             HHHHHHHHHHHhHhhhH-HHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCccHHHHHHHHHHHHH
Confidence            322222 2222221111 1111222223 345667777888888888889999999999999888999998877776666


Q ss_pred             HHHHH
Q 021674          295 TAVWN  299 (309)
Q Consensus       295 ~~~~~  299 (309)
                      .+...
T Consensus       181 ~~~~~  185 (406)
T PRK15402        181 FFGLW  185 (406)
T ss_pred             HHHHH
Confidence            54433

>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters

Probab=99.08  E-value=4.3e-09  Score=94.06  Aligned_cols=165  Identities=18%  Similarity=0.212  Sum_probs=108.1

Q ss_pred             HHHHHHHHHHHHHHHHHhHHHHHHHHhCCCccchhhHhhhhHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHhhHH
Q 021674          123 LIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLG  202 (309)
Q Consensus       123 ~~~~~~~~~~~~~~~~~wlp~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~~~~~~  202 (309)
                      .....++.....+......|.+.++ +|.+..+.+.......++..++.++.|+++||++||+...         .+...
T Consensus         4 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~d~~g~r~~~~---------~~~~~   73 (352)
T cd06174           4 LFLGFFLSGLDRGLLSPALPLLAED-LGLSASQAGLIVSAFSLGYALGSLLAGYLSDRFGRRRVLL---------LGLLL   73 (352)
T ss_pred             HHHHHHHHHHhhhhhHhhHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCchhhH---------HHHHH
Confidence            3445556666677788888888865 6999999999999999999999999999999998775211         11111


Q ss_pred             HHHHHHHhhccCchHHHHHH-HHHHHhhhhhhhcchhhhhhcc-CCCchHHHHHHHhHhHhhhhhHHHhHHHhhcccCCc
Q 021674          203 PAFFLTQLSHVDSPAMAVLC-MACSQGTDAFSQSGLYSNHQDI-APRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSW  280 (309)
Q Consensus       203 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~a~~~~~~~~~lgg~i~~~~~g~l~~~~~~  280 (309)
                      ..+........++....... ...+.+.+ ...+...+...|. ++++|+.+.+..+...++|..++|.+.+.+.++.+|
T Consensus        74 ~~~~~~~~~~~~~~~~~~~~~~l~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~  152 (352)
T cd06174          74 FALGSLLLAFASSLWLLLVGRFLLGLGGG-ALYPAAAALIAEWFPPKERGRALGLFSAGFGLGALLGPLLGGLLAESLGW  152 (352)
T ss_pred             HHHHHHHHHHhccHHHHHHHHHHHHcccc-cccHhHHHHHHHhCCccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhH
Confidence            11111111112233322222 22222211 1112222223333 446899999999999999999999999999998889


Q ss_pred             hHHHHHHHHHHHHHHHHH
Q 021674          281 DDVFKVSVGLYLVGTAVW  298 (309)
Q Consensus       281 ~~~~~~~~~~~~~~~~~~  298 (309)
                      +..+.+.+.+.+++.+..
T Consensus       153 ~~~~~~~~~~~~~~~~~~  170 (352)
T cd06174         153 RWLFLILAILGLLLALLL  170 (352)
T ss_pred             HHHHHHHHHHHHHHHHHH
Confidence            988888777766665443

MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3

>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional

Probab=99.08  E-value=5e-09  Score=98.23  Aligned_cols=156  Identities=12%  Similarity=0.054  Sum_probs=88.6

Q ss_pred             HHHhHHHHHHHHhCCCccchhhHhhhhHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHhhHHHHHHHHHhh-ccCc
Q 021674          137 LLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLS-HVDS  215 (309)
Q Consensus       137 ~~~wlp~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~  215 (309)
                      +..++| +++++ |+|..+.++..+...++..++.++.|+++||+|+|+.....      .+......+...... ..++
T Consensus        48 ~~~~~p-~l~~~-g~s~~~~g~~~~~~~i~~~~~~~~~G~l~Dr~g~k~~l~~~------~~~~~i~~~~~~~~~~~~~~  119 (452)
T PRK11273         48 FALAMP-YLVEQ-GFSRGDLGFALSGISIAYGFSKFIMGSVSDRSNPRVFLPAG------LILAAAVMLFMGFVPWATSS  119 (452)
T ss_pred             HHHhhH-HHHHc-CCCHHHHHHHHHHHHHHHHHHHhhhhhhhhccCCchhHHHH------HHHHHHHHHHHHhhhccccc
Confidence            345566 56666 99999999999999999999999999999999987421110      011111111111111 1112


Q ss_pred             hHHHHH-HHHHHHhhhhhhhcchhhh-hhccCCCchHHHHHHHhHhHhhhhhHHHhHH-HhhcccCCchHHHHHHHHHHH
Q 021674          216 PAMAVL-CMACSQGTDAFSQSGLYSN-HQDIAPRYSGVLLGLSNTAGVLAGVFGTAAT-GYILQHGSWDDVFKVSVGLYL  292 (309)
Q Consensus       216 ~~~~~~-~~~~~~~~~~~~~~~~~~~-~~~~~~~~~g~a~~~~~~~~~lgg~i~~~~~-g~l~~~~~~~~~~~~~~~~~~  292 (309)
                      ...... ....+.+.+ ...+..... .+..++++++.+.++.|...++|+.+.+.+. ..+....+|+..|++.+.+.+
T Consensus       120 ~~~~~~~~~l~gi~~g-~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~gw~~~f~i~~~~~~  198 (452)
T PRK11273        120 IAVMFVLLFLCGWFQG-MGWPPCGRTMVHWWSQKERGGIVSVWNCAHNVGGGLPPLLFLLGMAWFNDWHAALYMPAFAAI  198 (452)
T ss_pred             HHHHHHHHHHHHHHHh-ccchHHHHHHHHhCChHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHhccHHHHHHHHHHHHH
Confidence            222222 222222221 111111111 2234567899999999999998875544443 333333589999988766655


Q ss_pred             HHHHHHHhh
Q 021674          293 VGTAVWNLF  301 (309)
Q Consensus       293 ~~~~~~~~~  301 (309)
                      +..++..++
T Consensus       199 ~~~~l~~~~  207 (452)
T PRK11273        199 LVALFAFAM  207 (452)
T ss_pred             HHHHHHHHH
Confidence            544443333

>PRK03893 putative sialic acid transporter; Provisional

Probab=99.08  E-value=1e-08  Score=97.10  Aligned_cols=160  Identities=7%  Similarity=0.037  Sum_probs=97.6

Q ss_pred             HHHHHHHHHHHHHHHHHhHHHHHHHHhCCCccchhhHhhhhHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHhhHH
Q 021674          123 LIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLG  202 (309)
Q Consensus       123 ~~~~~~~~~~~~~~~~~wlp~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~~~~~~  202 (309)
                      +.+..++...........+|. +++++|+|..+.+.......++..++.++.|+++||+|||+.        +. .+...
T Consensus        25 ~~~~~~~~~~~~~~~~~~~~~-i~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~--------~~-~~~~~   94 (496)
T PRK03893         25 AWLGYLLDGFDFVLITLVLTE-VQGEFGLTTVQAASLISAAFISRWFGGLLLGAMGDRYGRRLA--------MV-ISIVL   94 (496)
T ss_pred             HHHHHHHHHHHHHHHHHHHHH-HHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHH--------HH-HHHHH
Confidence            344444444444444455554 556789999999999999999999999999999999997631        11 11111


Q ss_pred             HHHHHHHhhccCchHHH-HHHHHHHHhhhhhhhcchhhhh-hccCCCchHHHHHHHhHhHhhhhhHHHhHHHhhcccCCc
Q 021674          203 PAFFLTQLSHVDSPAMA-VLCMACSQGTDAFSQSGLYSNH-QDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSW  280 (309)
Q Consensus       203 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~g~a~~~~~~~~~lgg~i~~~~~g~l~~~~~~  280 (309)
                      .++........++.... +.....+++.+.. ........ +..++++++.+.++.+...++|..++|.+.+.+.++.+|
T Consensus        95 ~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~-~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~w  173 (496)
T PRK03893         95 FSVGTLACGFAPGYWTLFIARLVIGMGMAGE-YGSSATYVIESWPKHLRNKASGFLISGFSIGAVVAAQVYSLVVPVWGW  173 (496)
T ss_pred             HHHHHHHHHHHhHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCH
Confidence            11111111112222222 2222222222111 11111222 234556789999999999999999999999999998899


Q ss_pred             hHHHHHHHHHHHH
Q 021674          281 DDVFKVSVGLYLV  293 (309)
Q Consensus       281 ~~~~~~~~~~~~~  293 (309)
                      +..|.+.+...++
T Consensus       174 ~~~f~~~~~~~~~  186 (496)
T PRK03893        174 RALFFIGILPIIF  186 (496)
T ss_pred             HHHHHHHHHHHHH
Confidence            9988765444433

>PRK12307 putative sialic acid transporter; Provisional

Probab=99.08  E-value=9e-09  Score=95.42  Aligned_cols=158  Identities=11%  Similarity=0.072  Sum_probs=96.9

Q ss_pred             HHHHHHHHHHHHHHHHHhHHHHHHHHhCCCccchhhHhhhhHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHhhHH
Q 021674          123 LIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLG  202 (309)
Q Consensus       123 ~~~~~~~~~~~~~~~~~wlp~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~~~~~~  202 (309)
                      ..+.++......+.....+| ++++++|.|..+.++......++..++.++.|+++||+|||+.        +. .+...
T Consensus        23 ~~~~~~~~~~~~~~~~~~~~-~i~~~~~~s~~~~~~~~~~~~~~~~l~~~~~g~l~dr~g~r~~--------l~-~~~~~   92 (426)
T PRK12307         23 AWLGYVFDGFDFMLIFYIMY-LIKADLGLTDMEGAFLATAAFIGRPFGGALFGLLADKFGRKPL--------MM-WSIVA   92 (426)
T ss_pred             HHHHHHHHHhHHHHHHHHHH-HHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHH--------HH-HHHHH
Confidence            33444444444444444444 4567789999999999999999999999999999999997631        11 11111


Q ss_pred             HHHHHHHhhccCchHHHHHH-HHHHHhhhhhhhcchhhhhhc-cCCCchHHHHHHHhHhHhhhhhHHHhHHHhhcccCCc
Q 021674          203 PAFFLTQLSHVDSPAMAVLC-MACSQGTDAFSQSGLYSNHQD-IAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSW  280 (309)
Q Consensus       203 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~-~~~~~~g~a~~~~~~~~~lgg~i~~~~~g~l~~~~~~  280 (309)
                      ..+........++......+ ...+.+.+.. .+.......| .++++|+.+.++.+....+|..+++.+.+.+.+..+|
T Consensus        93 ~~~~~~~~~~~~~~~~l~~~r~l~G~g~g~~-~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~~~~~l~~~l~~~~~w  171 (426)
T PRK12307         93 YSVGTGLSGLASGVIMLTLSRFIVGMGMAGE-YACASTYAVESWPKHLKSKASAFLVSGFGIGNIIAAYFMPSFAEAYGW  171 (426)
T ss_pred             HHHHHHHHHHHhHHHHHHHHHHHHHHHHhhH-HHHHHHHHHHhCCHhHhhHhhhHHHHHHhHHHHHHHHHHHHHcccCCH
Confidence            11111111122223222222 2223222211 1111122223 3557799999999999999999999999999888889


Q ss_pred             hHHHHHHHHHH
Q 021674          281 DDVFKVSVGLY  291 (309)
Q Consensus       281 ~~~~~~~~~~~  291 (309)
                      +..|.+.....
T Consensus       172 ~~~f~i~~~~~  182 (426)
T PRK12307        172 RAAFFVGLLPV  182 (426)
T ss_pred             HHHHHHHHHHH
Confidence            99887754433

>PRK09705 cynX putative cyanate transporter; Provisional

Probab=99.06  E-value=1e-08  Score=94.29  Aligned_cols=155  Identities=19%  Similarity=0.213  Sum_probs=97.3

Q ss_pred             HHHHHhHHHHHHHHhCCCccchhhHhhhhHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHhhHHHHHHHHHhhccC
Q 021674          135 FILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVD  214 (309)
Q Consensus       135 ~~~~~wlp~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  214 (309)
                      +.....+|... +++|+|..+.++..+...++..++.+..|+++||+|||+.        + ..+....++........+
T Consensus        26 ~~~~~~lp~i~-~~~~~s~~~~g~~~s~~~~~~~l~~~~~g~l~dr~G~r~~--------l-~~~~~l~~~~~~~~~~a~   95 (393)
T PRK09705         26 TSVGPLLPQLR-QASGMSFSVAALLTALPVVTMGGLALAGSWLHQHVSERRS--------V-AISLLLIAVGALMRELYP   95 (393)
T ss_pred             hccchhHHHHH-HHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHhCchHH--------H-HHHHHHHHHHHHHHHHCc
Confidence            44556676554 6789999999999999999999999999999999998742        1 122222222222222333


Q ss_pred             chHHHHH-HHHHHHhhhhhhhcchhhhhhccCCCchHHHHHHHhHhHhhhhhHHHhHHHhhccc-CCchHHHHHHHHHHH
Q 021674          215 SPAMAVL-CMACSQGTDAFSQSGLYSNHQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQH-GSWDDVFKVSVGLYL  292 (309)
Q Consensus       215 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~a~~~~~~~~~lgg~i~~~~~g~l~~~-~~~~~~~~~~~~~~~  292 (309)
                      +....+. -...+.+.+.. .........+..|++++.+.++.+....+|+.+++.+.+.+.++ .+|+..+...+...+
T Consensus        96 ~~~~ll~~r~l~Gig~~~~-~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~g~~~~~~l~~~~~~w~~~~~~~~~~~~  174 (393)
T PRK09705         96 QSALLLSSALLGGVGIGII-QAVMPSVIKRRFQQRTPLVMGLWSAALMGGGGLGAAITPWLVQHSETWYQTLAWWALPAV  174 (393)
T ss_pred             chHHHHHHHHHHHhHHHHH-hhhhhHHHHHHccccchhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHH
Confidence            3333222 22223332221 11112222334467889999999988889999999999998887 479887665444444


Q ss_pred             HHHHHHHh
Q 021674          293 VGTAVWNL  300 (309)
Q Consensus       293 ~~~~~~~~  300 (309)
                      +..+.+..
T Consensus       175 ~~~~~~~~  182 (393)
T PRK09705        175 VALFAWWW  182 (393)
T ss_pred             HHHHHHHH
Confidence            44433333

>TIGR00902 2A0127 phenyl proprionate permease family protein

Probab=99.06  E-value=6.5e-09  Score=95.22  Aligned_cols=163  Identities=10%  Similarity=-0.007  Sum_probs=100.5

Q ss_pred             HHHHHHHHHHHHHHHHHHhHHHHHHHHhCCCccchhhHhhhhHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHhhH
Q 021674          122 ALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFL  201 (309)
Q Consensus       122 ~~~~~~~~~~~~~~~~~~wlp~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~~~~~  201 (309)
                      .+...+++...+.-....++|.|+++ +|+|..+.|...+...+...++.++.|.++||++|+.   . .++.+. .+..
T Consensus         8 ~l~~~~~~~~~~~~~~~p~l~~~l~~-~g~s~~~ig~~~s~~~~~~~~~~~~~g~l~d~~~~~~---~-~~~~~~-~~~~   81 (382)
T TIGR00902         8 WLALGFFGYFCAYGIFLPFFPAWLKG-IGLGEEMIGLLIGAALIARFAGGLFFAPLIKDANHII---I-ALRLLA-LASA   81 (382)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHH---H-HHHHHH-HHHH
Confidence            34455566555555666889999965 7999999999999999999999999999999987531   1 111111 1111


Q ss_pred             HHHHHHHHhhccCchHHHHHHHH-HHHhhhhhhhcchhhhhhccCCCchHHHHHHHhHhHhhhhhHHHhHHHhhcccCCc
Q 021674          202 GPAFFLTQLSHVDSPAMAVLCMA-CSQGTDAFSQSGLYSNHQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSW  280 (309)
Q Consensus       202 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~g~a~~~~~~~~~lgg~i~~~~~g~l~~~~~~  280 (309)
                      ......  ....++.+..++... .+.+... ..+...+...+ ..++++.+.+.....+.+|..++|.+.|.+.++.+|
T Consensus        82 l~~~~~--~~~~~~~~~l~~~~~l~~~~~~~-~~p~~~al~~~-~~~~~~~~~g~~~~~~slG~~~g~~l~g~l~~~~g~  157 (382)
T TIGR00902        82 IFAAAF--SAGAHNAWLLFIAIGLFALFFSA-GMPIGDALANT-WQKQFGLDYGKVRLIGSAAFIIGSALFGGLIGMFDE  157 (382)
T ss_pred             HHHHHH--HHhhhhHHHHHHHHHHHHHHHcc-chhHHHHHHHH-HHHHcCCCccHHHHHHHHHHHHHHHHHHHHHHHcCh
Confidence            111111  112233333222211 1111111 11111111122 235677788888999999999999999999999889


Q ss_pred             hHHHHHHHHHHHHH
Q 021674          281 DDVFKVSVGLYLVG  294 (309)
Q Consensus       281 ~~~~~~~~~~~~~~  294 (309)
                      +..|.+...+.++.
T Consensus       158 ~~~f~~~~~~~~~~  171 (382)
T TIGR00902       158 QNILAILTAGLAFM  171 (382)
T ss_pred             hHHHHHHHHHHHHH
Confidence            98887765543333

This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.

>PRK11195 lysophospholipid transporter LplT; Provisional

Probab=99.05  E-value=5.7e-09  Score=96.03  Aligned_cols=170  Identities=14%  Similarity=0.088  Sum_probs=105.0

Q ss_pred             chHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhCCCccchhhHhhhhHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHH
Q 021674          117 KPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQ  196 (309)
Q Consensus       117 ~~~~~~~~~~~~~~~~~~~~~~~wlp~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~  196 (309)
                      +|+++.+....++...+......-+|.+. +++|.+..+.+.......+...+..++.|+++||++||+......     
T Consensus         2 ~~~f~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~~s~~~~~~~~~~~~l~~~l~~~~~G~laDr~grr~vl~~~~-----   75 (393)
T PRK11195          2 SKGFYAIMAAQFFSALADNALLFAAIALL-KELHYPDWSQPLLQMFFVLAYIVLAPFVGAFADSFPKGRVMFIAN-----   75 (393)
T ss_pred             CCcHHHHHHHHHHHHHHHHHHHHHHHHHH-HHcCCcHHHHHHHHHHHHHHHHHHHhhhhHhhhccCCchhhHHHH-----
Confidence            45566667777776666555555566554 567888889999999999999999999999999999885332210     


Q ss_pred             HHhhHHHHHHHHHhhccCchHHHHHHHHHHHhhhhhhhcchhhhhhc-cCCCchHHHHHHHhHhHhhhhhHHHhHHHhhc
Q 021674          197 SIGFLGPAFFLTQLSHVDSPAMAVLCMACSQGTDAFSQSGLYSNHQD-IAPRYSGVLLGLSNTAGVLAGVFGTAATGYIL  275 (309)
Q Consensus       197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~g~a~~~~~~~~~lgg~i~~~~~g~l~  275 (309)
                       .......+... .  ..++  .+.-...+.+.+ ...+...+...| .++++++.+.++.+....++..+||.+.|.+.
T Consensus        76 -~~~~~~~~~~~-~--~~~~--~~~r~l~G~~~a-~~~pa~~a~i~~~~~~~~~~~a~~~~~~~~~~~~~~Gp~lgG~l~  148 (393)
T PRK11195         76 -GIKLLGCLLML-F--GIHP--LLAYGLVGIGAA-AYSPAKYGILTELLPGEKLVKANGWMEGSTIAAILLGTVLGGALA  148 (393)
T ss_pred             -HHHHHHHHHHH-H--HHHH--HHHHHHHHHHHH-HHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence             11111111111 1  1112  111111222211 112222333334 35578999999999999999999999999999


Q ss_pred             ccCCchHHHHHHHHHHHHHHHHHHh
Q 021674          276 QHGSWDDVFKVSVGLYLVGTAVWNL  300 (309)
Q Consensus       276 ~~~~~~~~~~~~~~~~~~~~~~~~~  300 (309)
                      +.. |...+.+.+.+++++.+....
T Consensus       149 ~~~-~~~~~~i~~~~~~~~~~~~~~  172 (393)
T PRK11195        149 DPH-AEAALAVCALIYLLAALFNLF  172 (393)
T ss_pred             HHH-HHHHHHHHHHHHHHHHHHHhc
Confidence            864 666666655555545444333

>PRK11102 bicyclomycin/multidrug efflux system; Provisional

Probab=99.05  E-value=5.8e-09  Score=95.01  Aligned_cols=154  Identities=14%  Similarity=0.095  Sum_probs=97.6

Q ss_pred             HHHHhHHHHHHHHhCCCccchhhHhhhhHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHhhHHHHHHHHHhhccCc
Q 021674          136 ILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDS  215 (309)
Q Consensus       136 ~~~~wlp~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  215 (309)
                      .....+|.+.+ ++|+|+.+.++..+...++..++.++.|+++||++||+.        +. .+.+...+........++
T Consensus         9 ~~~p~~~~~~~-~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~--------~~-~~~~~~~i~~~~~~~~~~   78 (377)
T PRK11102          9 MYLPALPVIAA-DFGVSAGSVQMTLSAYILGFAIGQLFYGPMADSFGRKPV--------IL-GGTLVFALAAVACALAQT   78 (377)
T ss_pred             HHhccHHHHHH-HhCCCHHHHHHHHHHHHHHHHHHHHhhchHHhhcCChHH--------HH-HHHHHHHHHHHHHHHHcc
Confidence            34456677765 589999999999999999999999999999999986531        11 111111111111112223


Q ss_pred             hHHHHH-HHHHHHhhhhhhhcchhhhhhc-cCCCchHHHHHHHhHhHhhhhhHHHhHHHhhcccCCchHHHHHHHHHHHH
Q 021674          216 PAMAVL-CMACSQGTDAFSQSGLYSNHQD-IAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSWDDVFKVSVGLYLV  293 (309)
Q Consensus       216 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-~~~~~~g~a~~~~~~~~~lgg~i~~~~~g~l~~~~~~~~~~~~~~~~~~~  293 (309)
                      ...... ....+.+.+.. .....+...+ .++++++.+.++.+....+|..++|.+.+.+.+..+|+..|.+.+.+.++
T Consensus        79 ~~~~~~~~~l~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~  157 (377)
T PRK11102         79 IDQLIYMRFLHGLAAAAA-SVVINALMRDMFPKEEFSRMMSFVTLVMTIAPLLAPIIGGWLLVWFSWHAIFWVLALAAIL  157 (377)
T ss_pred             HHHHHHHHHHHHHHHHHH-HHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChHHHHHHHHHHHHH
Confidence            322222 22222222211 1112222233 34567999999999999999999999999999887899988877666665


Q ss_pred             HHHHHHh
Q 021674          294 GTAVWNL  300 (309)
Q Consensus       294 ~~~~~~~  300 (309)
                      ..+....
T Consensus       158 ~~~~~~~  164 (377)
T PRK11102        158 AAALVFF  164 (377)
T ss_pred             HHHHHHH
Confidence            5444333

>PRK11128 putative 3-phenylpropionic acid transporter; Provisional

Probab=99.04  E-value=8.2e-09  Score=94.53  Aligned_cols=159  Identities=10%  Similarity=-0.039  Sum_probs=97.0

Q ss_pred             HHHHHHHHHHHHHhHHHHHHHHhCCCccchhhHhhhhHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHhhHHHHHH
Q 021674          127 HFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFF  206 (309)
Q Consensus       127 ~~~~~~~~~~~~~wlp~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~~~~~~~~~~  206 (309)
                      +++...+...+..++|.|+++ +|.|..+.|...+...+...++.++.|.++||++||...    ++.+..... .....
T Consensus        13 ~~~~~~~~g~~~p~l~~~l~~-~g~s~~~iG~~~~~~~l~~~l~~~~~g~l~dr~g~~~~~----~~~~~~~~~-~~~~~   86 (382)
T PRK11128         13 YFGYFFAYGVFLPFWSVWLKG-QGYTPETIGLLLGAGLVARFLGSLLIAPRVKDPSQLIPA----LRLLALLTL-LFAVA   86 (382)
T ss_pred             HHHHHHHHHHHhhhHHHHHHh-cCCCHHHHHHHHHHHHHHHHhhhHHHHHHHhhhcchHHH----HHHHHHHHH-HHHHH
Confidence            455555566677899999966 699999999999999999999999999999999874210    111211111 11111


Q ss_pred             HHHhhccCchHHHHHHHH-HHHhhhhhhhcchhhhhhccCCCchHHHHHHHhHhHhhhhhHHHhHHHhhcccCCchHHHH
Q 021674          207 LTQLSHVDSPAMAVLCMA-CSQGTDAFSQSGLYSNHQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSWDDVFK  285 (309)
Q Consensus       207 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~g~a~~~~~~~~~lgg~i~~~~~g~l~~~~~~~~~~~  285 (309)
                      .  ....++.+....... .+.+.+ ...+...+...+. .++++.+.+..+..+++|..++|.+.|.+.++.+|+..|+
T Consensus        87 ~--~~~~~~~~~l~i~~~l~g~~~~-~~~~~~~a~~~~~-~~~~~~a~~~~~~~~~lg~~igp~lgg~l~~~~g~~~~f~  162 (382)
T PRK11128         87 F--WFGAHSFWLLFVAIGLFNLFFS-PLVPLTDALANTW-QKQIGLDYGKVRLWGSIAFVIGSALTGKLVSWFGEQAILW  162 (382)
T ss_pred             H--HHhcccHHHHHHHHHHHHHHHc-ccccHHHHHHHHH-HhhccCCcchHHHHHHHHHHHHHHHHHHHHHHcChhHHHH
Confidence            1  112233332222211 222111 1111111111222 2335555666777788999999999999999988999888


Q ss_pred             HHHHHHHHHH
Q 021674          286 VSVGLYLVGT  295 (309)
Q Consensus       286 ~~~~~~~~~~  295 (309)
                      +.++..++..
T Consensus       163 ~~~~~~~~~~  172 (382)
T PRK11128        163 ILTAGVASML  172 (382)
T ss_pred             HHHHHHHHHH
Confidence            7665554443

>TIGR00892 2A0113 monocarboxylate transporter 1

Probab=99.01  E-value=1.1e-08  Score=96.14  Aligned_cols=152  Identities=11%  Similarity=0.059  Sum_probs=97.1

Q ss_pred             HHHHHhHHHHHHHHhCCCccchhhHhhhhHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHhhHHHHHHHHHhhccC
Q 021674          135 FILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVD  214 (309)
Q Consensus       135 ~~~~~wlp~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  214 (309)
                      +.+..++|.+. +++|.|..+.++......+...++.++.|+++||++||+..        . .+..............+
T Consensus        36 ~~~~~~~~~i~-~~~g~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr~g~r~~l--------~-~~~~~~~~~~~~~~~~~  105 (455)
T TIGR00892        36 KAVTVFFKELQ-QIFQATYSETAWISSIMLAVLYAGGPISSILVNRFGCRPVV--------I-AGGLLASLGMILASFSS  105 (455)
T ss_pred             cchhhhHHHHH-HHhCcchhHHHHHHHHHHHHHHHhhHHHHHHHHHcCchHHH--------H-hhHHHHHHHHHHHHHhh
Confidence            34556677655 56899999999999888888899999999999999977421        1 11111111111111222


Q ss_pred             chHHHHH-H-HHHHHhhhhhhhcchhhhhhccCCCchHHHHHHHhHhHhhhhhHHHhHHHhhcccCCchHHHHHHHHHHH
Q 021674          215 SPAMAVL-C-MACSQGTDAFSQSGLYSNHQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSWDDVFKVSVGLYL  292 (309)
Q Consensus       215 ~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~g~a~~~~~~~~~lgg~i~~~~~g~l~~~~~~~~~~~~~~~~~~  292 (309)
                      +...... . +..+.+.+... ........+..+++|+.+.++.+....+|+.++|.+.+.+.+..+|+..|.+.+++.+
T Consensus       106 ~~~~l~~~~~~l~G~~~~~~~-~~~~~~~~~~~~~~r~~a~g~~~~~~~~g~~~~~~l~~~l~~~~gwr~~f~~~~~~~~  184 (455)
T TIGR00892       106 NVIELYLTAGFITGLGLAFNF-QPSLTMLGKYFYRRRPLANGLAMAGSPVFLSTLAPLNQYLFESFGWRGSFLILGGLLL  184 (455)
T ss_pred             hHHHHHHHHHHHHHhcchhhh-hHHHHHHHHHHHhhHHHHHHHHHhcccHHHHHHHHHHHHHHHHhChHHHHHHHHHHHH
Confidence            2222211 1 12222222111 1122222233467899999999999999999999999999998889999998877766


Q ss_pred             HHHHH
Q 021674          293 VGTAV  297 (309)
Q Consensus       293 ~~~~~  297 (309)
                      ++.+.
T Consensus       185 ~~~v~  189 (455)
T TIGR00892       185 HCCVC  189 (455)
T ss_pred             HHHHH
Confidence            55443

>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]

Probab=98.99  E-value=1.4e-08  Score=91.16  Aligned_cols=177  Identities=16%  Similarity=0.216  Sum_probs=111.8

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhCCCccchhhHhhhhHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHH
Q 021674          118 PPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQS  197 (309)
Q Consensus       118 ~~~~~~~~~~~~~~~~~~~~~~wlp~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~  197 (309)
                      +++|.... ++..++..+.+..=+-+++.+++|+|+.|.+++.+++.+.+.+..+.-|.+.||+|.|++.      .+..
T Consensus        14 ~~L~~S~~-af~v~F~VW~l~s~l~~~i~~~~~LS~~q~~ll~aiPil~GallRl~~g~l~drfGgR~~~------~~s~   86 (417)
T COG2223          14 RNLWLSTL-AFDVGFMVWTLFSPLGVFIKSDFGLSEGQKGLLVAIPILVGALLRLPYGFLTDRFGGRKWT------ILSM   86 (417)
T ss_pred             HHHHHHHH-HHHHHHHHHHHHHHHHhhhccccCCCHHHHHHHHHHHHHHhHHHHHHHHhhhcccCchHHH------HHHH
Confidence            34444333 3333444555555566777899999999999999999999999999999999999987421      1111


Q ss_pred             HhhHHHHHHHHHhhccCch-HHHHHHHHHHHhhhhhhhcchhhhhhc-cCCCchHHHHHHHhHhHhhhhhHHHhHHHhhc
Q 021674          198 IGFLGPAFFLTQLSHVDSP-AMAVLCMACSQGTDAFSQSGLYSNHQD-IAPRYSGVLLGLSNTAGVLAGVFGTAATGYIL  275 (309)
Q Consensus       198 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~g~a~~~~~~~~~lgg~i~~~~~g~l~  275 (309)
                      +.++.+++........++. ...++.+.++.+.+.++.+  .++... .+|+..|.|.|++. .+|+|..+.+.+...++
T Consensus        87 ~l~~IP~~~~~~a~~~~~~~~ll~~gll~G~~GasFav~--m~~~s~~fP~~~qG~AlGI~g-~GN~G~av~q~~~P~v~  163 (417)
T COG2223          87 LLLLIPCLGLAFAVTYPSTWQLLVIGLLLGLAGASFAVG--MPNASFFFPKEKQGLALGIAG-AGNLGVAVAQLVAPLVA  163 (417)
T ss_pred             HHHHHHHHHHHHHccCCchHHHHHHHHHHhcccceehcc--cccccccCChhhhhHHHHHhc-cccccHHHHHHHHHHHH
Confidence            2222233332222222211 2222333333333323222  222333 45678999999877 99999999999988888


Q ss_pred             ccCC---chHHHHHHHHHHHHHHHHHHhhcCC
Q 021674          276 QHGS---WDDVFKVSVGLYLVGTAVWNLFSTG  304 (309)
Q Consensus       276 ~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~  304 (309)
                      ...+   |+.+..+.+...++.++...+..++
T Consensus       164 ~~~g~~~w~~~~~i~~~~l~v~~v~~~~~~~d  195 (417)
T COG2223         164 VAFGFLAWRNVAGIYVVALAIAAVLAWLGMND  195 (417)
T ss_pred             HHHhhHHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence            8766   8888877777777766665555433

>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]

Probab=98.97  E-value=5.3e-08  Score=88.06  Aligned_cols=174  Identities=18%  Similarity=0.112  Sum_probs=117.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhCCCccchhhHhhhhHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHH
Q 021674          119 PVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSI  198 (309)
Q Consensus       119 ~~~~~~~~~~~~~~~~~~~~~wlp~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~~  198 (309)
                      +.+.+.+..|+....=+...--+|..-+ ++|.|..++|.+.+...++..+++++-..++||+.||++...         
T Consensus        14 ~l~aLa~~~F~igttEfv~~gLLp~iA~-dl~vs~~~aG~lis~yAl~~ai~ap~l~~lt~r~~Rr~lLl~---------   83 (394)
T COG2814          14 ALLALALAAFAIGTTEFVPVGLLPPIAA-DLGVSEGAAGQLITAYALGVALGAPLLALLTGRLERRRLLLG---------   83 (394)
T ss_pred             HHHHHHHHHHHHHhHHHHHHhchHHHHH-HcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcccchHHHHHH---------
Confidence            4556677777777777788888888775 589999999999999999999999999999999988742211         


Q ss_pred             hhHHHHHHHHHhhccCchHHHHHH-HHHHHhhhhhhhcchhhhhhccCCCchHHHHHHHhHhHhhhhhHHHhHHHhhccc
Q 021674          199 GFLGPAFFLTQLSHVDSPAMAVLC-MACSQGTDAFSQSGLYSNHQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQH  277 (309)
Q Consensus       199 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~g~a~~~~~~~~~lgg~i~~~~~g~l~~~  277 (309)
                      .+..............+....+.. ...+...+.+..........-.+|++++.|.+++++.-.++..+|.+++.++-|.
T Consensus        84 ~l~lFi~~n~l~alAp~f~~Ll~aR~~~g~a~G~f~~i~~~~a~~lvpp~~~~~Aiaiv~~G~tlA~v~GvPLGt~ig~~  163 (394)
T COG2814          84 LLALFIVSNLLSALAPSFAVLLLARALAGLAHGVFWSIAAALAARLVPPGKRGRALALVFTGLTLATVLGVPLGTFLGQL  163 (394)
T ss_pred             HHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccchhhHHHHHHHHHHHHHHHhccHHHHHHHH
Confidence            111111111111122233222221 1122222222111111122335778999999999999999999999999999999


Q ss_pred             CCchHHHHHHHHHHHHHHHHHHhhc
Q 021674          278 GSWDDVFKVSVGLYLVGTAVWNLFS  302 (309)
Q Consensus       278 ~~~~~~~~~~~~~~~~~~~~~~~~~  302 (309)
                      -||+..|++.+++.+++.+......
T Consensus       164 ~GWR~~F~~ia~l~ll~~~~~~~~l  188 (394)
T COG2814         164 FGWRATFLAIAVLALLALLLLWKLL  188 (394)
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHHhC
Confidence            8999999998888777765444443

>PRK15034 nitrate/nitrite transport protein NarU; Provisional

Probab=98.97  E-value=5e-08  Score=90.81  Aligned_cols=146  Identities=10%  Similarity=0.044  Sum_probs=81.9

Q ss_pred             chHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhCCCccchhhHhhhhHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHH
Q 021674          117 KPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQ  196 (309)
Q Consensus       117 ~~~~~~~~~~~~~~~~~~~~~~~wlp~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~  196 (309)
                      +|+++...+..+......+....-.|.+-++++|+|..|.+++.+.+.++..+..+..|++.||+|.|+..        .
T Consensus        33 ~r~l~~s~~~f~~~F~~w~~~~~l~~~~~~~~~~ls~~q~g~l~ai~~l~~al~rip~G~l~Dr~G~R~v~--------~  104 (462)
T PRK15034         33 RRNLWISVSCLLLAFCVWMLFSAVTVNLNKIGFNFTTDQLFLLTALPSVSGALLRVPYSFMVPIFGGRRWT--------V  104 (462)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHH--------H
Confidence            34555555554443333333334444444557999999999999999999999999999999999976311        1


Q ss_pred             HHhhHHHHHHHHHhhc-----cCchHHHH-HHHHHHHhhhhhhhcchhhhhhc-cCCCchHHHHHHHhHhHhhhhhHHHh
Q 021674          197 SIGFLGPAFFLTQLSH-----VDSPAMAV-LCMACSQGTDAFSQSGLYSNHQD-IAPRYSGVLLGLSNTAGVLAGVFGTA  269 (309)
Q Consensus       197 ~~~~~~~~~~~~~~~~-----~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~g~a~~~~~~~~~lgg~i~~~  269 (309)
                       ++.....+.......     .++....+ .....+.+.  ...........+ .+++++|.+.|+....+++|..+++.
T Consensus       105 -~~~ll~~i~~~~~~~a~~~~~~s~~~lli~r~l~Gigg--~~f~~~~~~vs~wfp~~~rG~A~Gi~~g~G~~G~~l~~~  181 (462)
T PRK15034        105 -FSTAILIIPCVWLGIAVQNPNTPFGIFIVIALLCGFAG--ANFASSMGNISFFFPKAKQGSALGINGGLGNLGVSVMQL  181 (462)
T ss_pred             -HHHHHHHHHHHHHHHHHcccCCCHHHHHHHHHHHHHHH--HhHHHHHHHHHHHCCHhHhHHHHHHHHHHHhhHHHHHHH
Confidence             111111111111111     12322222 222233321  122222222333 45578999999987777777776655


Q ss_pred             HHHh
Q 021674          270 ATGY  273 (309)
Q Consensus       270 ~~g~  273 (309)
                      +...
T Consensus       182 l~p~  185 (462)
T PRK15034        182 VAPL  185 (462)
T ss_pred             HHHH
Confidence            5544

>TIGR00885 fucP L-fucose:H+ symporter permease

Probab=98.96  E-value=8.3e-08  Score=88.89  Aligned_cols=165  Identities=9%  Similarity=0.033  Sum_probs=97.1

Q ss_pred             HHHHHHHHHHHHHHHHHhHHHHHHHHhCCCccchhhHhhhhHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHhhHH
Q 021674          123 LIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLG  202 (309)
Q Consensus       123 ~~~~~~~~~~~~~~~~~wlp~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~~~~~~  202 (309)
                      +...++............+|.+ ++++|+|..+.|++.+...++..++++..|++.||+|+|+.        + ..+...
T Consensus         8 ~~~~f~~~G~~~~~~~~l~~~~-~~~~~~s~~~~g~l~s~~~~g~~i~~~~~g~l~~r~G~r~~--------~-~~g~~l   77 (410)
T TIGR00885         8 ITSLFALWGFANDITNPMVPQF-QQAFTLTAFQAALVQSAFYGGYFIMAIPAAIFMKKLSYKAG--------I-LLGLFL   77 (410)
T ss_pred             HHHHHHHHHHHHHhHHHHHHHH-HHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHH--------H-HHHHHH
Confidence            3333443333332333555544 77899999999999999999999999999999999997631        1 111111


Q ss_pred             HHHHHH---HhhccCchHHHH-HHHHHHHhhhhhhhcchhhhhh-ccCCCchHHHHHHHhHhHhhhhhHHHhHHHhhccc
Q 021674          203 PAFFLT---QLSHVDSPAMAV-LCMACSQGTDAFSQSGLYSNHQ-DIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQH  277 (309)
Q Consensus       203 ~~~~~~---~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~a~~~~~~~~~lgg~i~~~~~g~l~~~  277 (309)
                      .+....   .....++....+ ..+..+.+.+.. .+...+... ..++++++...++.+...++|..++|.+.+.+...
T Consensus        78 ~~~g~~l~~~~~~~~~~~~~l~~~~l~G~g~g~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~~g~~i~~~l~~~  156 (410)
T TIGR00885        78 YALGAFLFWPAAEIMNYTLFLVGLFILTAGLGFL-ETAANPYILVMGPESTATRRLNLAQSFNPFGSIIGMVVAQQLILS  156 (410)
T ss_pred             HHHHHHHHHHHHhhccHHHHHHHHHHHHhhHHHH-HhhhhHHHHHHCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence            111111   111122222222 222233333222 111112222 23456688889999999999999999998887532


Q ss_pred             --------------------------CCchHHHHHHHHHHHHHHHHH
Q 021674          278 --------------------------GSWDDVFKVSVGLYLVGTAVW  298 (309)
Q Consensus       278 --------------------------~~~~~~~~~~~~~~~~~~~~~  298 (309)
                                                .+|+..|.+.+.+.++..+.+
T Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~fl~~a~~~~~~~~~~  203 (410)
T TIGR00885       157 NLPHQSQDVLDKLSPEELSAIKHSDLASVQTPYMIIGAVVLAVALLI  203 (410)
T ss_pred             CCccchhhhhhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence                                      248888877666655544443

This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.

>TIGR01299 synapt_SV2 synaptic vesicle protein SV2

Probab=98.96  E-value=5.5e-08  Score=95.69  Aligned_cols=147  Identities=19%  Similarity=0.178  Sum_probs=88.8

Q ss_pred             HhHHHHHHHHhCCCccchhhHhhhhHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHhhHHHHHHHHHhhccCchHH
Q 021674          139 TWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSPAM  218 (309)
Q Consensus       139 ~wlp~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  218 (309)
                      ..+| .+++.+|++..+.+++.+...++..++.++.|+++||+|||+..        . .+++...+........++...
T Consensus       188 ~ilp-~i~~~~gls~~~~g~l~s~~~lG~iiG~li~G~LsDR~GRR~~l--------i-i~lil~~i~~ll~afa~s~~~  257 (742)
T TIGR01299       188 FVLP-SAEKDLCIPDSGKGMLGLIVYLGMMVGAFFWGGLADKLGRKQCL--------L-ICLSVNGFFAFFSSFVQGYGF  257 (742)
T ss_pred             HHHH-HHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHH--------H-HHHHHHHHHHHHHHHHhhHHH
Confidence            4444 45567899999999999999999999999999999999987421        1 111111111111111222222


Q ss_pred             H-HHHHHHHHhhhhhhhcchhhhhhcc-CCCchHHHHHHHhHhHhhhhhHHHhHHHhhccc-------------CCchHH
Q 021674          219 A-VLCMACSQGTDAFSQSGLYSNHQDI-APRYSGVLLGLSNTAGVLAGVFGTAATGYILQH-------------GSWDDV  283 (309)
Q Consensus       219 ~-~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~a~~~~~~~~~lgg~i~~~~~g~l~~~-------------~~~~~~  283 (309)
                      . +.-+..+++.+.. .+.......+. +++.|+...+..++...+|+.+++.+...++.+             .+|+..
T Consensus       258 llv~R~l~G~g~g~~-~p~~~~~isE~~p~~~Rg~~~g~~~~~~~iG~ila~~la~~il~~~G~~~~~g~~~~~~gWR~l  336 (742)
T TIGR01299       258 FLFCRLLSGFGIGGA-IPIVFSYFAEFLAQEKRGEHLSWLCMFWMIGGIYAAAMAWAIIPHYGWSFQMGSAYQFHSWRVF  336 (742)
T ss_pred             HHHHHHHHHHHHHHH-HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhccccccccccHHHH
Confidence            2 2222233333221 12222333344 457899999999999999999998877665532             257777


Q ss_pred             HHHHHHHHHHHHH
Q 021674          284 FKVSVGLYLVGTA  296 (309)
Q Consensus       284 ~~~~~~~~~~~~~  296 (309)
                      +.+.+...+++.+
T Consensus       337 ~~i~~lp~ll~ll  349 (742)
T TIGR01299       337 VIVCAFPCVFAIG  349 (742)
T ss_pred             HHHHHHHHHHHHH
Confidence            7766655554443

This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.

>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily

Probab=98.94  E-value=3.5e-08  Score=93.71  Aligned_cols=182  Identities=13%  Similarity=0.128  Sum_probs=117.4

Q ss_pred             hhcchHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhCCCccchhhHhhhhHHHHHHHHHHHHHHHHHHHHcCCChhhHHH
Q 021674          114 ILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRK  193 (309)
Q Consensus       114 l~~~~~~~~~~~~~~~~~~~~~~~~~wlp~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~  193 (309)
                      -+|||.+..++...+..+.+.+....=++-+..+ ..-|+...+++.....+-..+.++.+|.++||+.||+..+..-  
T Consensus         6 plr~~~Fr~lw~a~~iS~lG~~~~~va~~wlv~~-lt~S~~~valv~~a~~LP~~Llsl~aG~laDr~drrrili~~~--   82 (524)
T PF05977_consen    6 PLRNRNFRRLWIAQLISNLGDWMQTVALAWLVTQ-LTGSPLMVALVQAASTLPILLLSLFAGALADRFDRRRILILSQ--   82 (524)
T ss_pred             cccCchHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHH--
Confidence            4788888888888888888776666555555543 4677888899888888899999999999999998775332210  


Q ss_pred             HHHHHhhHHHHHHHHHhhccCchHHHHHHHHHHHhh-hhhhhcchhhhhhcc-CCCchHHHHHHHhHhHhhhhhHHHhHH
Q 021674          194 IMQSIGFLGPAFFLTQLSHVDSPAMAVLCMACSQGT-DAFSQSGLYSNHQDI-APRYSGVLLGLSNTAGVLAGVFGTAAT  271 (309)
Q Consensus       194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~-~~~~~g~a~~~~~~~~~lgg~i~~~~~  271 (309)
                      .+..+..  ..+.........+++..+. +.+..++ .++..+...+...+. ++++...|.++++...++...+||.+.
T Consensus        83 ~~~~~~~--~~L~~l~~~~~~~~~~Ll~-~~fl~g~~~a~~~PA~~A~ip~lV~~~~L~~A~al~s~~~niar~iGPalg  159 (524)
T PF05977_consen   83 LLRALVA--LLLAVLAFFGLLSPWLLLI-LTFLLGIGSAFFNPAWQAIIPELVPKEDLPAANALNSISFNIARIIGPALG  159 (524)
T ss_pred             HHHHHHH--HHHHHHHHhCcCCHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhccHhhHHHHHHHHHHHHHHHHhccchHH
Confidence            0111100  1111111112223332222 2222222 233334444444454 445778889999999999999999999


Q ss_pred             HhhcccCCchHHHHHHHHHHHHHHHHHHhh
Q 021674          272 GYILQHGSWDDVFKVSVGLYLVGTAVWNLF  301 (309)
Q Consensus       272 g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~  301 (309)
                      |.++...|...+|.+-+.++++..+....+
T Consensus       160 G~Lva~~G~~~~f~inalsfl~~i~~l~~~  189 (524)
T PF05977_consen  160 GILVAFFGAAAAFLINALSFLISILALLRW  189 (524)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence            999988777888888888877765554444

EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].

>TIGR00896 CynX cyanate transporter

Probab=98.93  E-value=3.6e-08  Score=89.26  Aligned_cols=146  Identities=21%  Similarity=0.215  Sum_probs=90.9

Q ss_pred             HHhHHHHHHHHhCCCccchhhHhhhhHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHhhHHHHHHHHHhhccCchH
Q 021674          138 LTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSPA  217 (309)
Q Consensus       138 ~~wlp~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  217 (309)
                      ...+|.+ ++++|+|..+.++..+...++..++.+..|+++||+++|+.        +. .+........... ..++..
T Consensus        20 ~~~lp~l-~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~--------~~-~~~~~~~~~~~~~-~~~~~~   88 (355)
T TIGR00896        20 GPLLPQI-RSALGMSFSVAGLLTALPVLCFAVLAPLAPWLARRFGEERS--------VA-AGLLLIAAGILIR-SAPGTA   88 (355)
T ss_pred             cccHHHH-HHHhCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCchHH--------HH-HHHHHHHHHHHHH-HhccHH
Confidence            3456654 45789999999999999999999999999999999997742        11 1111111111111 222333


Q ss_pred             HHHHH-HHHHHhhhhhhhcchhhhhhccCCCchHHHHHHHhHhHhhhhhHHHhHHHhhcccC--CchHHHHHHHHHHHHH
Q 021674          218 MAVLC-MACSQGTDAFSQSGLYSNHQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQHG--SWDDVFKVSVGLYLVG  294 (309)
Q Consensus       218 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~g~a~~~~~~~~~lgg~i~~~~~g~l~~~~--~~~~~~~~~~~~~~~~  294 (309)
                      ..+.. ...+.+.+.. .........+..+++++.+.++.+...++|..+++.+.+.+.++.  +|+..|...+.+.+++
T Consensus        89 ~l~~~~~~~g~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~~~~~l~~~~~~~w~~~f~~~~~~~~~~  167 (355)
T TIGR00896        89 LLFAGTALIGVGIAII-NVLLPSLIKRDFPQRVGLMTGLYSMALMGGAALAAAATVPLAQHSGGHWQQALAWWALPALLA  167 (355)
T ss_pred             HHHHHHHHHHHHHHHH-hccchHHHHHhCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHH
Confidence            22211 2222222211 111112223445678999999999999999999999999888763  3888776655544444


Q ss_pred             H
Q 021674          295 T  295 (309)
Q Consensus       295 ~  295 (309)
                      .
T Consensus       168 ~  168 (355)
T TIGR00896       168 L  168 (355)
T ss_pred             H
Confidence            3

This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.

>PRK10133 L-fucose transporter; Provisional

Probab=98.93  E-value=1.6e-07  Score=87.75  Aligned_cols=144  Identities=11%  Similarity=0.096  Sum_probs=86.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHhHHHHHHHHhCCCccchhhHhhhhHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHhh
Q 021674          121 WALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGF  200 (309)
Q Consensus       121 ~~~~~~~~~~~~~~~~~~~wlp~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~~~~  200 (309)
                      ..+...++............+|.+ ++++|.|+.+.++......++..++.+..|+++||+|+|+..        . .+.
T Consensus        29 ~~~~~~~~~~~~~~~~~~~~~p~i-~~~~~~s~~~~gl~~~~~~~g~~i~~~~~g~l~dr~G~r~~l--------~-~g~   98 (438)
T PRK10133         29 ALLCSLFFLWAVANNLNDILLPQF-QQAFTLTNFQAGLIQSAFYFGYFIIPIPAGILMKKLSYKAGI--------I-TGL   98 (438)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHH-HHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHH--------H-HHH
Confidence            334444454445555666777776 888999999999999999999999999999999999987321        1 111


Q ss_pred             HHHHHHHHH---hhccCchHHHHH-HHHHHHhhhhhhhcchhhhhhccCCC-chHHHHHHHhHhHhhhhhHHHhHHHhhc
Q 021674          201 LGPAFFLTQ---LSHVDSPAMAVL-CMACSQGTDAFSQSGLYSNHQDIAPR-YSGVLLGLSNTAGVLAGVFGTAATGYIL  275 (309)
Q Consensus       201 ~~~~~~~~~---~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~a~~~~~~~~~lgg~i~~~~~g~l~  275 (309)
                      ...++....   ....++....+. .+..+.+.+.. .........+.+++ ++....+..+....+|..++|.+.+.+.
T Consensus        99 ~~~~~~~~l~~~~~~a~~~~~ll~~r~l~G~g~g~~-~~~~~~~v~~~~~~~~~~~~~s~~~~~~~~G~~~g~~~g~~l~  177 (438)
T PRK10133         99 FLYALGAALFWPAAEIMNYTLFLVGLFIIAAGLGCL-ETAANPFVTVLGPESSGHFRLNLAQTFNSFGAIIAVVFGQSLI  177 (438)
T ss_pred             HHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHH-HhhHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            111111111   112223332222 22233333222 11122222234444 4555688889999999999998877654

>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional

Probab=98.91  E-value=6e-08  Score=101.00  Aligned_cols=182  Identities=14%  Similarity=0.092  Sum_probs=101.0

Q ss_pred             HhhcchHHHHHHHHHHHHHHHHHH----HHHhHHHHHHHHhCCCc-cchhhHhhhhHHHHHHHHHHHHHHHHHHHHcCCC
Q 021674          113 LILSKPPVWALIVSHFCHNWGTFI----LLTWMPTYYNQVLHFNL-TESGLFCVLPWLTMAFSANLGGWIADTLVSKGLS  187 (309)
Q Consensus       113 ~l~~~~~~~~~~~~~~~~~~~~~~----~~~wlp~~l~~~~g~s~-~~~g~~~~~~~~~~~ig~~~~G~l~dr~~~r~~~  187 (309)
                      .++|+++++.++...++...+.+.    +..+.+..+.+..+.+. ...++..+...+...+.++++|+++||++||+..
T Consensus         6 ~l~~~~~f~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~~G~laDr~~rk~~~   85 (1140)
T PRK06814          6 YLMKSRRFAPLFWTQFFGAFNDNFLKNALVILILYGLSGALGAYNNALVTLAGAVFILPFFIFSALAGQLADKYDKAKLA   85 (1140)
T ss_pred             hhhhccccHHHHHHHHHhHHHHHHHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHHHHHhhhHHhhhhhccHHHHH
Confidence            466777776666665555444322    22222222322222222 3356667777888999999999999999987421


Q ss_pred             hhhHHHHHHHHhhHHHHHHHHHhhccCchHHHHHHH-HHHHhhhhhhhcchhhhhhc-cCCCchHHHHHHHhHhHhhhhh
Q 021674          188 VTTVRKIMQSIGFLGPAFFLTQLSHVDSPAMAVLCM-ACSQGTDAFSQSGLYSNHQD-IAPRYSGVLLGLSNTAGVLAGV  265 (309)
Q Consensus       188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~-~~~~~~g~a~~~~~~~~~lgg~  265 (309)
                      ..     +............... ..++.+..+++. ..+.+. ++..+...+...+ .++++++.+.++.++..++|..
T Consensus        86 ~~-----~~~~~~~~~~~~~~~~-~~~s~~~l~~~~~l~gi~~-a~~~p~~~a~l~~~~~~~~~~~a~~~~~~~~~ig~~  158 (1140)
T PRK06814         86 KI-----LKFAEIGIAALAIYGF-HLNSVPLLFAALFLMGIHS-ALFGPIKYSILPDHLNKDELLGANALVEAGTFIAIL  158 (1140)
T ss_pred             HH-----HHHHHHHHHHHHHHHH-HHhhHHHHHHHHHHHHHHH-HhhchHHHHhhHhhcCccccchhhHHHHHHHHHHHH
Confidence            00     0111111111111111 112333322222 222221 2222223333333 4557789999999999999999


Q ss_pred             HHHhHHHhhcccCCchHHHHHHHHHHHHHHHHHHhh
Q 021674          266 FGTAATGYILQHGSWDDVFKVSVGLYLVGTAVWNLF  301 (309)
Q Consensus       266 i~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~  301 (309)
                      +||.++|++.+..+|...|...+.+.+++.+.+..+
T Consensus       159 igp~l~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~  194 (1140)
T PRK06814        159 LGTIIGGLATISGNFVILVALLMGIAVLGWLASLFI  194 (1140)
T ss_pred             HHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHhhC
Confidence            999999999999889888855554454444444433

>PRK11902 ampG muropeptide transporter; Reviewed

Probab=98.88  E-value=1.4e-07  Score=87.02  Aligned_cols=164  Identities=10%  Similarity=0.033  Sum_probs=97.5

Q ss_pred             HHHHHHHHHHHHHhHHHHHHHHhCCCccchhhHhhhhHHHHHHHHHHHHHHHHHH-----HHcCCChhhHHHHHHHHhhH
Q 021674          127 HFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTL-----VSKGLSVTTVRKIMQSIGFL  201 (309)
Q Consensus       127 ~~~~~~~~~~~~~wlp~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~G~l~dr~-----~~r~~~~~~~~~~~~~~~~~  201 (309)
                      ++.......-...-+|.||++ .|+|..+.|++..+...  .+..++.|+++||+     |||+..       +. .+..
T Consensus         8 ~~~~~~~~~~~~~~~~~~l~~-~g~~~~~ig~~~~~~~~--~~~~~l~g~~~Dr~~~~~~g~rr~~-------l~-~~~~   76 (402)
T PRK11902          8 GFASGLPLALTSGTLQAWMTV-EGLDIQTIGFFSLVGQA--YIFKFLWAPLMDRYTPPLLGRRRGW-------LL-LTQV   76 (402)
T ss_pred             HHHHhhhHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHH--HHHHHHHHHHHHcccccCCCcchhH-------HH-HHHH
Confidence            444444555566789999986 59999999998766554  58889999999999     555321       11 1111


Q ss_pred             HH--HHHHHHhhcc-CchHHHHHHHHHHHhhhhhhhcchhhhhhc-cCCCchHHHHHHHhHhHhhhhhHHHhHHHhhccc
Q 021674          202 GP--AFFLTQLSHV-DSPAMAVLCMACSQGTDAFSQSGLYSNHQD-IAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQH  277 (309)
Q Consensus       202 ~~--~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~g~a~~~~~~~~~lgg~i~~~~~g~l~~~  277 (309)
                      ..  +......... ++.+....+................+...+ .++++|+.+.++......+|..+++.+.+.+.+.
T Consensus        77 ~~~l~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~al~~~~~~~~~r~~~~~~~~~g~~~g~i~g~~l~~~l~~~  156 (402)
T PRK11902         77 GLAASIAAMAFCPPHAALWPLAGLAVLVAFLSASQDIVFDAYSTDVLHPEERGAGAAVKVLGYRLAMLVSGGLALWLADR  156 (402)
T ss_pred             HHHHHHHHHHhcCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhhHHHHHHHHHHHHHHHHHhHHHHHHHhc
Confidence            11  1111111111 122222211111111111111111122223 4556799999999988889999999999999886


Q ss_pred             -CCchHHHHHHHHHHHHHHHHHHhh
Q 021674          278 -GSWDDVFKVSVGLYLVGTAVWNLF  301 (309)
Q Consensus       278 -~~~~~~~~~~~~~~~~~~~~~~~~  301 (309)
                       .+|+..|++.+++.+++.+.....
T Consensus       157 ~~gw~~~f~i~a~~~l~~~l~~~~~  181 (402)
T PRK11902        157 VLGWGNTYLLMAGLMLAGALTTLWA  181 (402)
T ss_pred             ccCHHHHHHHHHHHHHHHHHHHHhc
Confidence             589999988777766655543333

>PRK09556 uhpT sugar phosphate antiporter; Reviewed

Probab=98.87  E-value=1.5e-08  Score=95.40  Aligned_cols=159  Identities=15%  Similarity=0.023  Sum_probs=93.7

Q ss_pred             HHHhHHHHHHHHhCCCccchhhHhhhhHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHhhHHHHHHHHHhhccCch
Q 021674          137 LLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSP  216 (309)
Q Consensus       137 ~~~wlp~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  216 (309)
                      +..-+|. +++++|+|..+.|++.+...++..++.++.|+++||+|+|+.....    +...+..............++.
T Consensus        48 ~~~~~~~-i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~----~~~~~~~~~~~~~~~~~~~~~~  122 (467)
T PRK09556         48 FKAAQND-MISTYGLSTTELGMIGLGFSITYGVGKTLVGYYADGKNTKQFLPFL----LILSAICMLGFGASLGSGSVSL  122 (467)
T ss_pred             hhhhhHH-HHHhcCCCHHHHHHHHHHHHHHHHHHHhhhhhHhhccCccchHHHH----HHHHHHHHHHHHHHHhcccchH
Confidence            4444665 5567899999999999999999999999999999999987522110    0011111111111111112222


Q ss_pred             HHHHHH-HHHHHhhhhhhhcchhhhhhc-cCCCchHHHHHHHhHhHhhhhhHHHhHHHhhccc---CCchHHHHHHHHHH
Q 021674          217 AMAVLC-MACSQGTDAFSQSGLYSNHQD-IAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQH---GSWDDVFKVSVGLY  291 (309)
Q Consensus       217 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~-~~~~~~g~a~~~~~~~~~lgg~i~~~~~g~l~~~---~~~~~~~~~~~~~~  291 (309)
                      ...+.+ ...+.+.+ ...+.......+ .+++++|.+.++.+...++|+.+++.+..++.+.   ++|+..|.+.+.+.
T Consensus       123 ~~l~~~r~l~G~~~~-~~~~~~~~~i~~~~~~~~rg~a~gi~~~~~~lG~~l~~~i~~~~~~~~~~~~~~~~f~~~g~~~  201 (467)
T PRK09556        123 GLMIALWALSGFFQS-TGGPCSYSTITRWTPRRKRGRFLGFWNISHNLGGAGAGGVALWGANYFFDGHVIGMFIFPSIIA  201 (467)
T ss_pred             HHHHHHHHHHHHHHh-ccchHHHHHHHHHcCccceeeeEEeeecccchhhhHHHHHHHHHHHhhccCcchhHHHHHHHHH
Confidence            222222 22222211 112222233333 4567899999999999999999999888776654   25887777755555


Q ss_pred             HHHHHHHHhh
Q 021674          292 LVGTAVWNLF  301 (309)
Q Consensus       292 ~~~~~~~~~~  301 (309)
                      ++..+++.++
T Consensus       202 ~~~~i~~~~~  211 (467)
T PRK09556        202 LIIGFIGLRY  211 (467)
T ss_pred             HHHHHHHHHh
Confidence            5444444444

>PRK11010 ampG muropeptide transporter; Validated

Probab=98.84  E-value=2.3e-07  Score=87.91  Aligned_cols=174  Identities=10%  Similarity=0.034  Sum_probs=105.2

Q ss_pred             hcchHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhCCCccchhhHhhhhHHHHHHHHHHHHHHHHHH-----HHcCCChh
Q 021674          115 LSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTL-----VSKGLSVT  189 (309)
Q Consensus       115 ~~~~~~~~~~~~~~~~~~~~~~~~~wlp~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~G~l~dr~-----~~r~~~~~  189 (309)
                      .++++.+.+...++......+.....+|.++++ .|.|..+.+....+. ... +++++.|.++||+     |||+.+  
T Consensus         9 ~~~~~~~~~~~l~~~~gl~~~~~~~~l~~~l~~-~g~~~~~ig~~~~~~-~~~-~~~~l~gpl~Dr~~~~~~Grrr~~--   83 (491)
T PRK11010          9 FQQPNSAILLILGFASGLPLALTSGTLQAWMTV-ENIDLKTIGFFSLVG-QAY-VFKFLWSPLMDRYTPPFLGRRRGW--   83 (491)
T ss_pred             HcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CCCCHHHHHHHHHHH-HHH-HHHHHHHHHHHcccccCCCCchHH--
Confidence            455566666666666666777777889999876 499999999874322 222 6889999999998     765421  


Q ss_pred             hHHHHHHHHhhHHHHHH--HHHhh-ccCchHHHH-HHHHHHHhhhhhhhcchhhhhhc-cCCCchHHHHHHHhHhHhhhh
Q 021674          190 TVRKIMQSIGFLGPAFF--LTQLS-HVDSPAMAV-LCMACSQGTDAFSQSGLYSNHQD-IAPRYSGVLLGLSNTAGVLAG  264 (309)
Q Consensus       190 ~~~~~~~~~~~~~~~~~--~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~g~a~~~~~~~~~lgg  264 (309)
                           + ..+.+..+..  ..... ..++..... .....+++.. .......+...| .++++++.+.++.+...++|.
T Consensus        84 -----l-l~~~i~~~~~~~~~a~~~~~~~l~~l~~~~~l~~~~~a-~~~i~~~a~~~~~~~~~~rg~~~~i~~~g~~lG~  156 (491)
T PRK11010         84 -----L-LATQLLLLVAIAAMGFLEPGTQLRWLAALAVVIAFCSA-SQDIVFDAWKTDVLPAEERGAGAAISVLGYRLAM  156 (491)
T ss_pred             -----H-HHHHHHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHH-HHHHHHHHHHHHhcChhhhHHHHHHHHHHHHHHH
Confidence                 1 1111111111  11111 112222222 1121222111 111111122223 455789999999999999999


Q ss_pred             hHHHhHHHhhccc-CCchHHHHHHHHHHHHHHHHHHh
Q 021674          265 VFGTAATGYILQH-GSWDDVFKVSVGLYLVGTAVWNL  300 (309)
Q Consensus       265 ~i~~~~~g~l~~~-~~~~~~~~~~~~~~~~~~~~~~~  300 (309)
                      .+++.+.+++.++ .+|+..|++.+++.++..+...+
T Consensus       157 llg~~l~~~l~~~~~GWr~~f~i~a~l~ll~~l~~~~  193 (491)
T PRK11010        157 LVSGGLALWLADRYLGWQGMYWLMAALLIPCIIATLL  193 (491)
T ss_pred             HHHHHHHHHHHhcccCHHHHHHHHHHHHHHHHHHHHh
Confidence            9999999999984 68999999877776666544433

>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter

Probab=98.83  E-value=4.9e-08  Score=91.76  Aligned_cols=145  Identities=15%  Similarity=0.156  Sum_probs=92.7

Q ss_pred             HhCCCccchhhHhhhhHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHhhHHHHHH--HHHhhccCchHHHHH-HHH
Q 021674          148 VLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFF--LTQLSHVDSPAMAVL-CMA  224 (309)
Q Consensus       148 ~~g~s~~~~g~~~~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~-~~~  224 (309)
                      +++++..+.|.+.+...++..++.+.+|+++||+++|+....         +.+...+.  +.......+....+. -+.
T Consensus        70 ~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~l~~---------~~~~~~~~~~~~~~~~~~~~~~l~~~r~~  140 (465)
T TIGR00894        70 NFKWSGALQGLILSSHFYGQIIIQIPVGYLAGKYVFKWSIGI---------GMFLSSVISIVIPWAAGGGIALVVFCRVI  140 (465)
T ss_pred             CCCCCHHHhhHHHHHHHHHHHHHHcchHHHHHHhCcchhhHH---------HHHHHHHHHHHHHHHHHcCchHHHHHHHH
Confidence            578999999999999999999999999999999998742211         11111111  110111111222111 122


Q ss_pred             HHHhhhhhhhcchhhhhhcc-CCCchHHHHHHHhHhHhhhhhHHHhHHHhhccc-CCchHHHHHHHHHHHHHHHHHHhhc
Q 021674          225 CSQGTDAFSQSGLYSNHQDI-APRYSGVLLGLSNTAGVLAGVFGTAATGYILQH-GSWDDVFKVSVGLYLVGTAVWNLFS  302 (309)
Q Consensus       225 ~~~~~~~~~~~~~~~~~~~~-~~~~~g~a~~~~~~~~~lgg~i~~~~~g~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~  302 (309)
                      .+.+.+ ...+.......+. ++++|+.+.++.+...++|..++|.+.+.+.+. .+|+..|.+.+++.++..+.+..+.
T Consensus       141 ~G~~~~-~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~i~~~l~~~l~~~~~gw~~~f~i~~~~~~~~~~~~~~~~  219 (465)
T TIGR00894       141 QGLAQG-SVSPATHKIIVKWAPPKERSRLLGMSTSGFQLGTFIFLPISGWLCESWGGWPMIFYVFGIVGCAWSLLWFVFP  219 (465)
T ss_pred             HHHhcc-cchhhHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCeehhhhhHHHHHHHHHHHHHh
Confidence            222211 1112222223333 457899999999999999999999999999988 5999999887776665555555543

>TIGR00880 2_A_01_02 Multidrug resistance protein

Probab=98.82  E-value=9.1e-08  Score=73.67  Aligned_cols=132  Identities=17%  Similarity=0.154  Sum_probs=78.5

Q ss_pred             hhhhHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHhhHHHHHHHHHhhccCchHHHHH-HHHHHHhhhhhhhcchh
Q 021674          160 CVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSPAMAVL-CMACSQGTDAFSQSGLY  238 (309)
Q Consensus       160 ~~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~  238 (309)
                      .....++..++.+..|++.||++||+..        . ................++...... ....+.+.+.. .+...
T Consensus         4 ~~~~~~~~~~~~~~~g~~~d~~g~~~~~--------~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~-~~~~~   73 (141)
T TIGR00880         4 LAGYALGQLIYSPLSGLLTDRFGRKPVL--------L-VGLFIFVLSTAMFALSSNITVLIIARFLQGFGAAFA-LVAGA   73 (141)
T ss_pred             EEeehhHHHHHHhhHHHHHhhcchhHHH--------H-HHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHH-HHhHH
Confidence            4456678889999999999999876321        1 111111111111112233332222 22222222211 11222


Q ss_pred             hhhhc-cCCCchHHHHHHHhHhHhhhhhHHHhHHHhhcccCCchHHHHHHHHHHHHHHHHHHhh
Q 021674          239 SNHQD-IAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSWDDVFKVSVGLYLVGTAVWNLF  301 (309)
Q Consensus       239 ~~~~~-~~~~~~g~a~~~~~~~~~lgg~i~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~  301 (309)
                      ....| .++++++.+.++.+...+++..++|.+.+.+.+..+|+..+.+...+.+++.+....+
T Consensus        74 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  137 (141)
T TIGR00880        74 ALIADIYPPEERGVALGLMSAGIALGPLLGPPLGGVLAQFLGWRAPFLFLAILALAAFILLAFL  137 (141)
T ss_pred             HHHHHHCChhhhhHHHHHHHHhHHHHHHHhHHhHHHHhcccchHHHHHHHHHHHHHHHHHHhhc
Confidence            22233 3456799999999999999999999999999988889888887766666655444443

>TIGR00879 SP MFS transporter, sugar porter (SP) family

Probab=98.82  E-value=1.6e-07  Score=87.68  Aligned_cols=136  Identities=13%  Similarity=0.034  Sum_probs=81.7

Q ss_pred             ccchhhHhhhhHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHhhHHHHHHHHHhhccCch-HHHHHHHHHHHhhhh
Q 021674          153 LTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSP-AMAVLCMACSQGTDA  231 (309)
Q Consensus       153 ~~~~g~~~~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~  231 (309)
                      ..+.+.+.+...++..++.++.|+++||+|||+...      ...+................+. ...+.-...+.+.+.
T Consensus        70 ~~~~~~~~~~~~~~~~i~~~~~g~l~d~~grr~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~  143 (481)
T TIGR00879        70 SSLWGLVVSIFLVGGFIGALFAGWLSDRFGRKKSLL------IIALLFVIGAILMGLAAFALSVEMLIVGRVLLGIGVGI  143 (481)
T ss_pred             hhHHHHHHHHHHHHHHHHHHHhhHhhhhhhhHHHHH------HHHHHHHHHHHHHHHhccccchHHHHHHHHHHHhhhhH
Confidence            788999999999999999999999999999873211      0011111111111111111111 121222222222221


Q ss_pred             hhhcchhhhhhc-cCCCchHHHHHHHhHhHhhhhhHHHhHH---HhhcccCCchHHHHHHHHHHHHHH
Q 021674          232 FSQSGLYSNHQD-IAPRYSGVLLGLSNTAGVLAGVFGTAAT---GYILQHGSWDDVFKVSVGLYLVGT  295 (309)
Q Consensus       232 ~~~~~~~~~~~~-~~~~~~g~a~~~~~~~~~lgg~i~~~~~---g~l~~~~~~~~~~~~~~~~~~~~~  295 (309)
                      . .........| .++++|+.+.++.+....+|..+++.+.   +...+..+|+..|.+.+...++..
T Consensus       144 ~-~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~w~~~f~~~~~~~~~~~  210 (481)
T TIGR00879       144 A-SALVPMYLSEIAPKALRGALTSLYQLAITFGILVAYGFGSGKVSLNNTLGWRIPLGLQLIPAGLLF  210 (481)
T ss_pred             H-HhHHHHHHHccCChhhhhhhhhHHHHHHHHHHHHHHHHHHHhhcCCCCccHHHHHHHHHHHHHHHH
Confidence            1 1222222333 3567899999999999999999999998   666566789999888555544443

This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)

>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter

Probab=98.80  E-value=6.9e-08  Score=89.78  Aligned_cols=161  Identities=16%  Similarity=0.119  Sum_probs=94.1

Q ss_pred             HHHHHHHHHhHHHHHHHHhCCCccchhhHhhhhHHHHHHHHHHHHHHHHHHH----HcCCChhhHHHHHHHHhhHHHHHH
Q 021674          131 NWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLV----SKGLSVTTVRKIMQSIGFLGPAFF  206 (309)
Q Consensus       131 ~~~~~~~~~wlp~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~G~l~dr~~----~r~~~~~~~~~~~~~~~~~~~~~~  206 (309)
                      +.....+.+|++.|++++.|+|+.+.|.+.+...+...+..++.|+++||.+    |||.        ++..+....++.
T Consensus        12 ~~~~~~~~~~l~~~~~~~~g~s~~~~g~i~~~~~i~~~i~~p~~G~lsDr~~~r~Grrr~--------~i~~~~~~~~i~   83 (437)
T TIGR00792        12 NFIFAIVSTYLLFFYTDVLGLSAAFVGTLFLVARILDAITDPIMGNIVDRTRTRWGKFRP--------WLLIGAIPFSIV   83 (437)
T ss_pred             HHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHhccchheEeeecCCCCCCCcch--------hHHHhHHHHHHH
Confidence            3445556688999999999999999999999999999999999999999854    3321        111111111111


Q ss_pred             --HHHhhcc-Cch---HHHHHH-HHHHHhhhhhhhcchhhhhhc--cCCCchHHHHHHHhHhHhhhhhHHHhHHHhhcc-
Q 021674          207 --LTQLSHV-DSP---AMAVLC-MACSQGTDAFSQSGLYSNHQD--IAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQ-  276 (309)
Q Consensus       207 --~~~~~~~-~~~---~~~~~~-~~~~~~~~~~~~~~~~~~~~~--~~~~~~g~a~~~~~~~~~lgg~i~~~~~g~l~~-  276 (309)
                        +...... +..   .+.... .....+.. ....+..+...+  .++++|+...+..+...++|+.+++.+.+.+.. 
T Consensus        84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~al~~~~~~~~~~R~~~~~~~~~~~~~g~~l~~~~~~~l~~~  162 (437)
T TIGR00792        84 LVLLFTTPDFSATGKLVYAYITYILLGLFYS-FVNIPYWSLVPAITLDPRERESLSTFRRFGATLGGLLVAVIVLPLVSY  162 (437)
T ss_pred             HHHHHhCCCCCcchHHHHHHHHHHHHHHHHH-hhcccHhhCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence              1111111 111   111111 11111111 111122222222  245788888898888888888777666655542 


Q ss_pred             ------cCCchHHHHHHHHHHHHHHHHHHh
Q 021674          277 ------HGSWDDVFKVSVGLYLVGTAVWNL  300 (309)
Q Consensus       277 ------~~~~~~~~~~~~~~~~~~~~~~~~  300 (309)
                            ..+|+..+.+.+++.++..++..+
T Consensus       163 ~~~~~~~~g~~~~~~i~~~l~~~~~~~~~~  192 (437)
T TIGR00792       163 FGGGDDKFGWFMFALVLALIGVVSLIICFF  192 (437)
T ss_pred             hCCCcccccHHHHHHHHHHHHHHHHHHHHc
Confidence                  246887777776666655544333

GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.

>TIGR00806 rfc RFC reduced folate carrier

Probab=98.79  E-value=4e-07  Score=84.15  Aligned_cols=158  Identities=12%  Similarity=0.003  Sum_probs=97.2

Q ss_pred             HHhHHHHHHHHhCCCccc-hhhHhhhhHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHhhHHHHHHHHHhhccCch
Q 021674          138 LTWMPTYYNQVLHFNLTE-SGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSP  216 (309)
Q Consensus       138 ~~wlp~~l~~~~g~s~~~-~g~~~~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  216 (309)
                      ..+..+++.+++|+|..+ .|.+......+-.+..+.+|+++||+|.|+.        + ....+.-.+........++.
T Consensus        45 ~s~a~p~L~~elglT~~qv~G~I~s~F~ysYal~qIp~GlLaDrlG~K~v--------L-~l~~l~Wsl~t~L~~fa~Sl  115 (511)
T TIGR00806        45 ESFITPYLLTVLNFTEETVTNEIIPVLPYSHLAVLVPVFLLTDYLRYKPV--------L-VLQALSFVCVWLLLLLGTSV  115 (511)
T ss_pred             HHHHHHHHHHHcCCCHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCchHH--------H-HHHHHHHHHHHHHHHHHHHH
Confidence            355556888899999999 9999999999999999999999999987631        1 11111111111111112122


Q ss_pred             HH-HHHHHHHHHhhhhhhhcchhhhh-hccCCCchHHHHHHHhHhHhhhhhHHHhHHHhhcccCCchH---HHHHHHHHH
Q 021674          217 AM-AVLCMACSQGTDAFSQSGLYSNH-QDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSWDD---VFKVSVGLY  291 (309)
Q Consensus       217 ~~-~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~g~a~~~~~~~~~lgg~i~~~~~g~l~~~~~~~~---~~~~~~~~~  291 (309)
                      .. .+.=+..|.+-++. . ..+... .-.++++|+.++++.+.+..+|.++++.+.+.+ ...+|+.   ...+..+..
T Consensus       116 ~~L~i~R~llGvaEA~~-~-A~~syI~~WfP~kER~ratsi~~sg~~vG~~Ia~~L~qll-~s~gWr~y~~Ln~Isl~s~  192 (511)
T TIGR00806       116 WHMQLMEVFYSVTMAAR-I-AYSSYIFSLVPPSRYQRAAAYSRAAVLLGVFLSSVLGQLL-VTLGWISYSTLNIISLVFM  192 (511)
T ss_pred             HHHHHHHHHHHHHHHHH-H-HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhcCchhHHHHHHHHHHHH
Confidence            21 11112222222211 1 222222 335678999999999999999999999999994 4445654   344555555


Q ss_pred             HHHHHHHHhhcCCccc
Q 021674          292 LVGTAVWNLFSTGEKV  307 (309)
Q Consensus       292 ~~~~~~~~~~~~~~~~  307 (309)
                      .++.++..+.++.++|
T Consensus       193 ~~a~~~a~~LP~~~~s  208 (511)
T TIGR00806       193 TFSVFLALFLKRPKRS  208 (511)
T ss_pred             HHHHHHHHhCCCCchh
Confidence            5566555555555554

Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.

>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated

Probab=98.77  E-value=3.1e-07  Score=95.62  Aligned_cols=157  Identities=10%  Similarity=0.098  Sum_probs=92.7

Q ss_pred             hhcchHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhCCCcc--chhhHhhhhHHHHHHHHHHHHHHHHHHHHcCCChhhH
Q 021674          114 ILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLT--ESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTV  191 (309)
Q Consensus       114 l~~~~~~~~~~~~~~~~~~~~~~~~~wlp~~l~~~~g~s~~--~~g~~~~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~  191 (309)
                      +++++.++......++..++.......+..++.+.++.+..  ..++..+...++..++.++.|+++||+|||+..... 
T Consensus         5 ~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~G~l~Dr~grk~~l~~~-   83 (1146)
T PRK08633          5 LLKIIGFLPLLLTQFLNAFNDLGHKILIQNTLIKAYDGSEQVILTAIVNALFLLPFLLLSSPAGFLADKFSKNRVIRIV-   83 (1146)
T ss_pred             hhhhhhhHHHHHHHHHhHHHHHHHHHHHHHHHHHHcCcccHHHHHHHHHHHHHHHHHHHhhhHhhhcccccHHHHHHHH-
Confidence            56677777777677766666655555566666666666533  357777778888999999999999999987421110 


Q ss_pred             HHHHHHHhhHHHHHHHHHhhccCchHHHHHH-HHHHHhhhhhhhcchhhhhhc-cCCCchHHHHHHHhHhHhhhhhHHHh
Q 021674          192 RKIMQSIGFLGPAFFLTQLSHVDSPAMAVLC-MACSQGTDAFSQSGLYSNHQD-IAPRYSGVLLGLSNTAGVLAGVFGTA  269 (309)
Q Consensus       192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~-~~~~~~g~a~~~~~~~~~lgg~i~~~  269 (309)
                          ..+..+ ..++.......++....+++ +..+.+.+ ...+...+...+ .++++++.+.++.+....+|..+++.
T Consensus        84 ----~~~~~~-~~~~~~~~~~~~~~~~l~~~r~l~G~~~~-~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~ig~~lg~~  157 (1146)
T PRK08633         84 ----KLFEVG-LTLLIVLAYYLGWFWLAFAVTFLLGAQSA-IYSPAKYGIIPELVGKENLSRANGLLEAFTIVAILAGTA  157 (1146)
T ss_pred             ----HHHHHH-HHHHHHHHHHHccHHHHHHHHHHHHHHHH-hhchHHHhhhHHhcCcccchhhhhHHHHHHHHHHHHHHH
Confidence                000011 11111111112222222222 22222222 112222223333 35578999999999999999999999


Q ss_pred             HHHhhccc
Q 021674          270 ATGYILQH  277 (309)
Q Consensus       270 ~~g~l~~~  277 (309)
                      +.+++.+.
T Consensus       158 l~~~l~~~  165 (1146)
T PRK08633        158 LFSFLFES  165 (1146)
T ss_pred             HHHHHHHh
Confidence            99998775

>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []

Probab=98.72  E-value=6e-08  Score=88.55  Aligned_cols=71  Identities=24%  Similarity=0.271  Sum_probs=60.1

Q ss_pred             hcchHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhCCCccchhhHhhhhHHHHHHHHHHHHHHHHHHHHcC
Q 021674          115 LSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKG  185 (309)
Q Consensus       115 ~~~~~~~~~~~~~~~~~~~~~~~~~wlp~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~G~l~dr~~~r~  185 (309)
                      +||+..|.....+++....+-....+.|.+|+++.|+|..++|.+.+...+...+..++.|.++||++.|+
T Consensus         4 ~~~~~~~~~s~~~f~~Ff~~gi~~pF~~iWL~~~~GLs~~~iG~i~s~~~~~~l~~qp~~G~i~Dklg~kK   74 (412)
T PF01306_consen    4 FKNKNYWWLSLFYFFYFFIWGIFLPFFPIWLTQVAGLSGTEIGIIFSAGSLFALLAQPVYGFISDKLGLKK   74 (412)
T ss_dssp             CHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHTHHHHHHHHHHCTTCS
T ss_pred             ccCchHHHHHHHHHHHHHHHHHHHHHHHHHHccccCCCHHHHHHHHHHHHHHHHHHHHhHHHhcchhhhhH
Confidence            47888888888877777776677799999999989999999999999999999999999999999999775

The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.

>PRK10406 alpha-ketoglutarate transporter; Provisional

Probab=98.70  E-value=1.5e-06  Score=81.05  Aligned_cols=151  Identities=13%  Similarity=0.112  Sum_probs=78.3

Q ss_pred             HHHHHhHHHHHHHHhC---CCccc---hhhHhhhhHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHhhHHHHHHHH
Q 021674          135 FILLTWMPTYYNQVLH---FNLTE---SGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLT  208 (309)
Q Consensus       135 ~~~~~wlp~~l~~~~g---~s~~~---~g~~~~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~~~~~~~~~~~~  208 (309)
                      +.......+++.++++   .+..+   .+.......++..++++++|+++||+|||+.        +. .+.....+...
T Consensus        38 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~~~G~l~Dr~Grr~~--------l~-~~~~~~~~~~~  108 (432)
T PRK10406         38 FYVYSFCSLYFAHIFFPSGNTTTQLLQTAGVFAAGFLMRPIGGWLFGRIADKHGRKKS--------ML-ISVCMMCFGSL  108 (432)
T ss_pred             HHHHHHHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHH--------HH-HHHHHHHHHHH
Confidence            3345556567777664   44443   2334445556677999999999999998741        11 11111111111


Q ss_pred             HhhccCch--------HHHHHH-HHHHHhhhhhhhcchhhhhhc-cCCCchHHHHHHHhHhHhhhhhHHHhHHHhhc---
Q 021674          209 QLSHVDSP--------AMAVLC-MACSQGTDAFSQSGLYSNHQD-IAPRYSGVLLGLSNTAGVLAGVFGTAATGYIL---  275 (309)
Q Consensus       209 ~~~~~~~~--------~~~~~~-~~~~~~~~~~~~~~~~~~~~~-~~~~~~g~a~~~~~~~~~lgg~i~~~~~g~l~---  275 (309)
                      .....++.        ...+.+ +..+.+.+.. .+.......| .++++|+.+.++.+.....|..+++.+...+.   
T Consensus       109 ~~~~~~~~~~~~~~~~~~l~~~R~l~G~g~g~~-~~~~~~~i~e~~p~~~rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~  187 (432)
T PRK10406        109 VIACLPGYETIGTWAPALLLLARLFQGLSVGGE-YGTSATYMSEVAVEGRKGFYASFQYVTLIGGQLLALLVVVVLQQTL  187 (432)
T ss_pred             HHhhcCCchhHHHHHHHHHHHHHHHHHhhhhhh-HhhHHHHHHHhCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence            11111111        111111 1222222211 1112222233 45678999888877766666666665544332   


Q ss_pred             -----ccCCchHHHHHHHHHHHHHH
Q 021674          276 -----QHGSWDDVFKVSVGLYLVGT  295 (309)
Q Consensus       276 -----~~~~~~~~~~~~~~~~~~~~  295 (309)
                           +..+|+..|.+.++..++..
T Consensus       188 ~~~~~~~~gWr~~F~i~~~~~ll~~  212 (432)
T PRK10406        188 EDAELREWGWRIPFALGAVLAVVAL  212 (432)
T ss_pred             CHHHHhccchHHHHHHHHHHHHHHH
Confidence                 24689999988766655443

>PRK10077 xylE D-xylose transporter XylE; Provisional

Probab=98.70  E-value=7.1e-07  Score=84.05  Aligned_cols=140  Identities=11%  Similarity=0.087  Sum_probs=81.2

Q ss_pred             CCCccchhhHhhhhHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHhhHHHHHHHHHhh-------ccCc-h--HHH
Q 021674          150 HFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLS-------HVDS-P--AMA  219 (309)
Q Consensus       150 g~s~~~~g~~~~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~-~--~~~  219 (309)
                      |.+..+.++..+...++..++.++.|+++||+|||+....      ..+.+....+. ....       ...+ .  ...
T Consensus        51 ~~~~~~~~~~~s~~~ig~~~~~~~~G~l~dr~Grr~~~~~------~~~l~~i~~~~-~~~~~~~~~~~~~~~~~~~~~l  123 (479)
T PRK10077         51 SAANSLLGFCVASALIGCIIGGALGGYCSNRFGRRDSLKI------AAVLFFISALG-SAWPEFGFTSIGPDNTGYVPEF  123 (479)
T ss_pred             cCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHH------HHHHHHHHHHH-HHhhccccccccccchhHHHHH
Confidence            8888999999999999999999999999999998742111      00111111111 1100       0011 1  111


Q ss_pred             HHH-HHHHHhhhhhhhcchhhhhhc-cCCCchHHHHHHHhHhHhhhhhHHHhHHHhhc--------ccCCchHHHHHHHH
Q 021674          220 VLC-MACSQGTDAFSQSGLYSNHQD-IAPRYSGVLLGLSNTAGVLAGVFGTAATGYIL--------QHGSWDDVFKVSVG  289 (309)
Q Consensus       220 ~~~-~~~~~~~~~~~~~~~~~~~~~-~~~~~~g~a~~~~~~~~~lgg~i~~~~~g~l~--------~~~~~~~~~~~~~~  289 (309)
                      +.. ...+++.+.. .+.......| .++++|+.+.++.+....+|..+++.+.+.+.        +..+|+..|.+.++
T Consensus       124 ~~~R~l~G~~~g~~-~~~~~~~i~e~~~~~~rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~gWr~~f~~~~~  202 (479)
T PRK10077        124 VIYRIIGGIGVGLA-SMLSPMYIAEIAPAHIRGKLVSFNQFAIIFGQLVVYFVNYFIARSGDASWLNTDGWRYMFASEAI  202 (479)
T ss_pred             HHHHHHHhhhHhHH-hhHHHHHHHhhCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhccCcccccccCChHHHHHHHHH
Confidence            111 1122222211 1112222333 45578999999999888888888876655443        33579999887666


Q ss_pred             HHHHHHHH
Q 021674          290 LYLVGTAV  297 (309)
Q Consensus       290 ~~~~~~~~  297 (309)
                      ..++..+.
T Consensus       203 ~~~~~~~~  210 (479)
T PRK10077        203 PALLFLML  210 (479)
T ss_pred             HHHHHHHH
Confidence            65555443

>PTZ00207 hypothetical protein; Provisional

Probab=98.68  E-value=1.5e-06  Score=83.41  Aligned_cols=155  Identities=12%  Similarity=0.060  Sum_probs=84.9

Q ss_pred             HHHHHHhHHHHHHHHhCCCccchhhHhhhhHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHhhHHHHHH--HHHhh
Q 021674          134 TFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFF--LTQLS  211 (309)
Q Consensus       134 ~~~~~~wlp~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~~~~~~~~~~--~~~~~  211 (309)
                      .|++..+.|. +++++|+|..+.+.+.... .......+..|+++||+|+|+...         ++.+...+.  +....
T Consensus        43 ~y~fsv~s~~-L~~~lgls~~~l~~i~svg-~~~g~~~lp~G~L~Dr~G~R~vll---------ig~ll~~iG~ll~ala  111 (591)
T PTZ00207         43 MYAFNLISGA-MQARYNLTQRDLSTITTVG-IAVGYFLLPYSFIYDYLGPRPIFV---------LSMTVFCLGTLLFALT  111 (591)
T ss_pred             HHHHHHHHHH-HHHHhCcCHHHHHHHHHHH-HHHHHHHHHHHHHHHHhCcHHHHH---------HHHHHHHHHHHHHHHH
Confidence            4666666665 5778999999988887653 344456678899999999763211         111111111  11111


Q ss_pred             c----cCchHHHHH-HHHHHHhhhhhhhcchhhhhhccCCCchHHHHHHHhHhHhhhhhHHHhHHHhhcccCCchHHHHH
Q 021674          212 H----VDSPAMAVL-CMACSQGTDAFSQSGLYSNHQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSWDDVFKV  286 (309)
Q Consensus       212 ~----~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~a~~~~~~~~~lgg~i~~~~~g~l~~~~~~~~~~~~  286 (309)
                      .    ..+.+...+ ....+.+.+.. .........+..|++||.+.|+.+....+|+++.+.+...+.+ .+|...|++
T Consensus       112 ~~~~i~~s~~~l~l~r~l~G~G~~~~-~~~~~~~i~~~Fp~~RG~a~Gi~~~~~gLGsaI~~~l~~~l~~-~~~~~~fl~  189 (591)
T PTZ00207        112 FQEVIEGSVVRLSVYNGLMTLGCMLF-DLGAVVTVLSVFPSNRGAVVAIMKTFTGLGSAILGSIQLAFFS-DNTSAYFFF  189 (591)
T ss_pred             hcccccCcHHHHHHHHHHHHHHHHHH-HHHHHHHHHHhChhhhHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhHHHHHHH
Confidence            0    112222221 12222222211 1111222233457889999999999999999865544444443 246666666


Q ss_pred             HHHHHHHHHHHHHhh
Q 021674          287 SVGLYLVGTAVWNLF  301 (309)
Q Consensus       287 ~~~~~~~~~~~~~~~  301 (309)
                      .+++.++..+.+..+
T Consensus       190 l~vl~~vv~ll~~~~  204 (591)
T PTZ00207        190 LMSFALVVGILAIVF  204 (591)
T ss_pred             HHHHHHHHHHHHHhh
Confidence            555555554444444

>PRK10642 proline/glycine betaine transporter; Provisional

Probab=98.68  E-value=2.2e-06  Score=81.20  Aligned_cols=152  Identities=16%  Similarity=0.182  Sum_probs=79.7

Q ss_pred             HHHHHhHHHHHHHHhCCCccch-hhH-----hhhhHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHhhHHHHHHHH
Q 021674          135 FILLTWMPTYYNQVLHFNLTES-GLF-----CVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLT  208 (309)
Q Consensus       135 ~~~~~wlp~~l~~~~g~s~~~~-g~~-----~~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~~~~~~~~~~~~  208 (309)
                      +..+.+.-+++.+.++.+..+. ...     .+...++..+|.++.|+++||+|||+.        +. .+.....+...
T Consensus        32 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~Grr~~--------l~-~~~~l~~i~~~  102 (490)
T PRK10642         32 FGVYGFVAYALGKVFFPGADPSVQMIAALATFSVPFLIRPLGGLFFGMLGDKYGRQKI--------LA-ITIVIMSISTF  102 (490)
T ss_pred             HHHHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHH--------HH-HHHHHHHHHHH
Confidence            3444444456776665443221 221     345567888999999999999998742        11 11111111111


Q ss_pred             HhhccCchHH--------HHHH-HHHHHhhhhhhhcchhhhhhc-cCCCchHHHHHHHhHhHhhhhhHHHhHHHhhc---
Q 021674          209 QLSHVDSPAM--------AVLC-MACSQGTDAFSQSGLYSNHQD-IAPRYSGVLLGLSNTAGVLAGVFGTAATGYIL---  275 (309)
Q Consensus       209 ~~~~~~~~~~--------~~~~-~~~~~~~~~~~~~~~~~~~~~-~~~~~~g~a~~~~~~~~~lgg~i~~~~~g~l~---  275 (309)
                      .....++...        .+.+ +..+++.+.. .+.......| .++++||.+.++.+....+|..+++.+...+.   
T Consensus       103 ~~a~~~~~~~~g~~a~~~l~~~R~l~G~g~g~~-~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~G~~lg~~~~~~~~~~~  181 (490)
T PRK10642        103 CIGLIPSYATIGIWAPILLLLCKMAQGFSVGGE-YTGASIFVAEYSPDRKRGFMGSWLDFGSIAGFVLGAGVVVLISTIV  181 (490)
T ss_pred             HHHhcccHHHHHHHHHHHHHHHHHHHHhHhHhh-HHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence            1122222211        1111 1122222211 1112222333 45678999999888777777777775554332   


Q ss_pred             -----ccCCchHHHHHHHHHHHHHHH
Q 021674          276 -----QHGSWDDVFKVSVGLYLVGTA  296 (309)
Q Consensus       276 -----~~~~~~~~~~~~~~~~~~~~~  296 (309)
                           ++.+|+..|++.+.+.+++.+
T Consensus       182 ~~~~~~~~gWR~~f~i~~~~~l~~~~  207 (490)
T PRK10642        182 GEANFLDWGWRIPFFIALPLGIIGLY  207 (490)
T ss_pred             CHHHhcCccHHHHHHHHHHHHHHHHH
Confidence                 246899999887655554443

>PRK09952 shikimate transporter; Provisional

Probab=98.67  E-value=3.4e-06  Score=78.76  Aligned_cols=159  Identities=11%  Similarity=0.047  Sum_probs=82.4

Q ss_pred             HHHHHHHHHHHHHHHhHHHHHHHHh--CCCccchhhHh-----hhhHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHH
Q 021674          125 VSHFCHNWGTFILLTWMPTYYNQVL--HFNLTESGLFC-----VLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQS  197 (309)
Q Consensus       125 ~~~~~~~~~~~~~~~wlp~~l~~~~--g~s~~~~g~~~-----~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~  197 (309)
                      +..++..+-...+....|.++.+++  +.++.+ +...     ....++..+++++.|+++||+|||+.        +. 
T Consensus        29 ~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~g~~~~G~l~Dr~Grr~~--------l~-   98 (438)
T PRK09952         29 AGAVVDWYDFLLYGITAALVFNREFFPQVSPAM-GTLAAFATFGVGFLFRPLGGVVFGHFGDRLGRKRM--------LM-   98 (438)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcHH-HHHHHHHHHHHHHHHHhhHHHHHHHHHHhhccHHH--------HH-
Confidence            3334433333333344555666554  666653 4432     23345667888999999999998731        11 


Q ss_pred             HhhHHHHHHHHHhhccCchH--------HHHHH-HHHHHhhhhhhhcchhhhhhc-cCCCchHHHHHHHhHhHhhhhhHH
Q 021674          198 IGFLGPAFFLTQLSHVDSPA--------MAVLC-MACSQGTDAFSQSGLYSNHQD-IAPRYSGVLLGLSNTAGVLAGVFG  267 (309)
Q Consensus       198 ~~~~~~~~~~~~~~~~~~~~--------~~~~~-~~~~~~~~~~~~~~~~~~~~~-~~~~~~g~a~~~~~~~~~lgg~i~  267 (309)
                      .+.....+........++..        ..+.+ ...+.+.+.. .+.......| .++++|+...+..+....+|..++
T Consensus        99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~-~~~~~~~~~e~~p~~~rg~~~~~~~~g~~~G~~l~  177 (438)
T PRK09952         99 LTVWMMGIATALIGLLPSFSTIGWWAPVLLVTLRAIQGFAVGGE-WGGAALLAVESAPKNKKAFYSSGVQVGYGVGLLLS  177 (438)
T ss_pred             HHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhhhccc-HHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHH
Confidence            12222222211122222221        11111 1122222211 1111222233 456788988888888888888888


Q ss_pred             HhHHHhhcc--------cCCchHHHHHHHHHHHHH
Q 021674          268 TAATGYILQ--------HGSWDDVFKVSVGLYLVG  294 (309)
Q Consensus       268 ~~~~g~l~~--------~~~~~~~~~~~~~~~~~~  294 (309)
                      +.+...+..        ..+|+..|.+.+.+.+++
T Consensus       178 ~~~~~~l~~~~~~~~~~~~gWr~~f~~~~~~~l~~  212 (438)
T PRK09952        178 TGLVSLISMMTTDEQFLSWGWRIPFLFSIVLVLIA  212 (438)
T ss_pred             HHHHHHHHHhCCHHHhhccChHHHHHHHHHHHHHH
Confidence            777665542        357999998776655443

>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]

Probab=98.65  E-value=4.1e-07  Score=83.71  Aligned_cols=183  Identities=15%  Similarity=0.217  Sum_probs=110.9

Q ss_pred             HhhcchH-HHHHHHHHHHHHHHHHHHHHhHHHHHHHHhC----CCccchhhHhhhhHHHHHHHHHHHHHHHHHHHHcCCC
Q 021674          113 LILSKPP-VWALIVSHFCHNWGTFILLTWMPTYYNQVLH----FNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLS  187 (309)
Q Consensus       113 ~l~~~~~-~~~~~~~~~~~~~~~~~~~~wlp~~l~~~~g----~s~~~~g~~~~~~~~~~~ig~~~~G~l~dr~~~r~~~  187 (309)
                      ..+++|+ ++.+...-+.--+.+|++-.-+-.|+....+    +|.+++.-+.....--.=...+++||++||+-.++  
T Consensus        15 ~~f~~Pr~l~~if~vE~WERFsyYGmraiL~~Yl~~~~~~gLg~~~~~A~~l~~~y~slVY~t~i~GG~laDr~LG~~--   92 (498)
T COG3104          15 KFFGQPRGLYLIFFVELWERFSYYGMRAILILYLYYQLGDGLGFDETHATGLFSAYGSLVYLTPIIGGWLADRVLGTR--   92 (498)
T ss_pred             ccCCCCchHHHHHHHHHHHHHhhhhhHHHHHHHHHHhccccCCcChHhhHHHHHHHHHHHHHHHHHHHHHHHHhcchh--
Confidence            3566654 5556666677778899999999999988888    88888777666665555567889999999974332  


Q ss_pred             hhhHHHHHHHHhhHHHHHHHHHhhccCchHH---HHHHHHHHHhhhhhhhcchhhh-hhccCCCchHHHHHHHhHhHhhh
Q 021674          188 VTTVRKIMQSIGFLGPAFFLTQLSHVDSPAM---AVLCMACSQGTDAFSQSGLYSN-HQDIAPRYSGVLLGLSNTAGVLA  263 (309)
Q Consensus       188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~g~a~~~~~~~~~lg  263 (309)
                          +.++....++...-..........+..   .+.++.++.|..-.+.+.+... ..+.+|+ |-.+.++..+..|+|
T Consensus        93 ----~tI~lGail~~iGh~~L~~~~~~~~~gl~i~L~~I~iG~Gl~K~NiS~llg~ly~~~Dpr-rD~gFt~fY~~iNiG  167 (498)
T COG3104          93 ----RTIVLGAILMAIGHLVLAISSVSGPGGLYIGLALIIVGTGLFKPNISSLLGELYPKDDPR-RDGGFTLFYMGINIG  167 (498)
T ss_pred             ----HHHHHHHHHHHHHHHHHhccccccccHHHHHHHHHHhccccccccHHHHHHHhcCCCCcc-cCCCccEEEEEeehH
Confidence                112221111111111111111012222   1222222222111111111111 1223344 666778888999999


Q ss_pred             hhHHHhHHHhhcccCCchHHHHHHHHHHHHHHHHHHhhc
Q 021674          264 GVFGTAATGYILQHGSWDDVFKVSVGLYLVGTAVWNLFS  302 (309)
Q Consensus       264 g~i~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~  302 (309)
                      +.++|.+.+++.++.+|+.+|..+++-..++.+.+..-.
T Consensus       168 sl~~p~i~~~~~~~~g~~~gF~~aavGm~~gl~~f~~~~  206 (498)
T COG3104         168 SLIAPIITGLLAINYGWHVGFGLAAVGMIIGLVIFLLGR  206 (498)
T ss_pred             HHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHcc
Confidence            999999999999999999999998888887776655544

>TIGR00889 2A0110 nucleoside transporter

Probab=98.64  E-value=1.3e-06  Score=81.16  Aligned_cols=63  Identities=24%  Similarity=0.204  Sum_probs=52.9

Q ss_pred             HHHHHHHHHHHHHHHHHHhHHHHHHHHhCCCccchhhHhhhhHHHHHHHHHHHHHHHHHHHHc
Q 021674          122 ALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSK  184 (309)
Q Consensus       122 ~~~~~~~~~~~~~~~~~~wlp~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~G~l~dr~~~r  184 (309)
                      .+.+.+++.+..+-.....++.++++++|+|..+.|++.+...++..++.+..|+++||+++|
T Consensus         6 ~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~s~~~iGl~~a~~~~~~~i~~~~~g~l~dr~g~~   68 (418)
T TIGR00889         6 KLKFMSFLQWFIWGSWLVTLGSYMSKTLHFSGAEIGWVYSSTGIAAILMPILVGIIADKWLSA   68 (418)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence            345555665555555668999999999999999999999999999999999999999999764

This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.

>TIGR00901 2A0125 AmpG-related permease

Probab=98.64  E-value=1.3e-06  Score=78.98  Aligned_cols=150  Identities=12%  Similarity=0.035  Sum_probs=86.0

Q ss_pred             HhHHHHHHHHhCCCccchhhHhhhhHHHHHHHHHHHHHHHHHH-----HHcCCChhhHHHHHHHHhhHHHHHH--HHHhh
Q 021674          139 TWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTL-----VSKGLSVTTVRKIMQSIGFLGPAFF--LTQLS  211 (309)
Q Consensus       139 ~wlp~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~G~l~dr~-----~~r~~~~~~~~~~~~~~~~~~~~~~--~~~~~  211 (309)
                      .-+|.+++ +.|+|.++.|+.... .+...+ .++.|.++||+     |||+        .++..+.+..+..  .....
T Consensus         9 ~~~~~~~~-~~g~s~~~~g~~~~~-~~~~~~-~~~~g~~~Dr~~~~~~Grr~--------~~l~~~~~~~~~~~~~l~~~   77 (356)
T TIGR00901         9 NTLPYWLR-SKNVSLKTIGFFSLV-GLPYSL-KFLWSPLVDTVYLPFFGRRR--------SWLVLTQVLLLSLLLILSFL   77 (356)
T ss_pred             hHHHHHHH-HcCCCHHHHHHHHHH-HHHHHH-HHHHHHHHhcccCCCCCccH--------HHHHHHHHHHHHHHHHHHcC
Confidence            34566665 579999999998644 444444 88999999998     4432        1111111111111  11111


Q ss_pred             ccCchHHHHHHHHHHHhh-hhhhhcchhhhhhc-cCCCchHHHHHHHhHhHhhhhhHHHhHHHhhcccCC--------ch
Q 021674          212 HVDSPAMAVLCMACSQGT-DAFSQSGLYSNHQD-IAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGS--------WD  281 (309)
Q Consensus       212 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~-~~~~~~g~a~~~~~~~~~lgg~i~~~~~g~l~~~~~--------~~  281 (309)
                      ......+.+.......+. .+.......+...| .++++|+.+.++.....++|..+++.+.+.+.++.+        |+
T Consensus        78 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~~~~g~~~~~~~~wr  157 (356)
T TIGR00901        78 VPSTDLPLLAGLAFLIAFFSATQDIALDAWRLEILSDEELGYGSTIYIVGYRAGMLLSGSLALVLASPEFANTGLITLWG  157 (356)
T ss_pred             CcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhhhchHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccccccH
Confidence            111111111111111111 11111111222223 356789999999999999999999999999888766        99


Q ss_pred             HHHHHHHHHHHHHHHHHH
Q 021674          282 DVFKVSVGLYLVGTAVWN  299 (309)
Q Consensus       282 ~~~~~~~~~~~~~~~~~~  299 (309)
                      ..|.+.+++.+++.+...
T Consensus       158 ~~f~i~ai~~l~~~~~~~  175 (356)
T TIGR00901       158 YIFFWTALLILPGLLVTL  175 (356)
T ss_pred             HHHHHHHHHHHHHHHHHH
Confidence            999888877766554433

>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family

Probab=98.60  E-value=1.6e-06  Score=79.63  Aligned_cols=172  Identities=15%  Similarity=0.061  Sum_probs=97.0

Q ss_pred             HHHHHHHHHHHHHHHHHHhHHHHHHHHhCCCccchhhH--hhhhHHHHHHHHHHH-HHHHHHHHHcCCChhhHHHHHHHH
Q 021674          122 ALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLF--CVLPWLTMAFSANLG-GWIADTLVSKGLSVTTVRKIMQSI  198 (309)
Q Consensus       122 ~~~~~~~~~~~~~~~~~~wlp~~l~~~~g~s~~~~g~~--~~~~~~~~~ig~~~~-G~l~dr~~~r~~~~~~~~~~~~~~  198 (309)
                      .+...++............+|.|+++ +|+|..+.|++  ...+.+...+.+++. ++.+||+|+|+.++.       ..
T Consensus         5 ~~~~ly~~~g~~~~~~~p~lp~~l~~-~g~~~~~iGl~~~~~l~~~~~~l~~p~~~~~~~~~~g~r~~~i~-------~~   76 (390)
T TIGR02718         5 TLGLLYLSQGIPIGLAMDALPTLLRE-DGAPLTALAFLPLVGLPWVVKFLWAPLVDNWWSWRLGRRRSWVL-------PM   76 (390)
T ss_pred             HHHHHHHHHHhHHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHHHHHhccccccCCcchhHHH-------HH
Confidence            34455666666666677899999976 59999999997  355666666666666 667888887643211       11


Q ss_pred             hhHHH--HHHHHHhhccCc-hHHHHHHHHHHHhhhhhhhcchhh-hhhccCCCchHHHHHHHhHhHhhhhhHHHhHHHhh
Q 021674          199 GFLGP--AFFLTQLSHVDS-PAMAVLCMACSQGTDAFSQSGLYS-NHQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYI  274 (309)
Q Consensus       199 ~~~~~--~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~g~a~~~~~~~~~lgg~i~~~~~g~l  274 (309)
                      .....  ............ ..+...................-. ..++.++++++...+.......+|..+++...+++
T Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~d~~~d~~~~~~~~~~~~~~~~~~~~~g~~lG~~~g~~~~~~l  156 (390)
T TIGR02718        77 QCLVSACLASLALVGPDVAGAGWAVGLLACASLASATQDIATDGMAAEHFNGRTLAKGNAVQIAGVMIGFFGGGAGTLVL  156 (390)
T ss_pred             HHHHHHHHHHHHcCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhhhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            11111  111111111112 112121111111111111110111 11233445567777777776688888888888899


Q ss_pred             cccCCchHHHHHHHHHHHHHHHHHHhh
Q 021674          275 LQHGSWDDVFKVSVGLYLVGTAVWNLF  301 (309)
Q Consensus       275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~  301 (309)
                      .++.+|+..|++.+++.++..+....+
T Consensus       157 ~~~~gw~~~f~~~a~l~~~~~~~~~~~  183 (390)
T TIGR02718       157 FGKFGQRPAFLLVACVPLASLVCVLWL  183 (390)
T ss_pred             HHHhCHHHHHHHHHHHHHHHHHHHHHc
Confidence            998889999998887776655554444

RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.

>PRK15075 citrate-proton symporter; Provisional

Probab=98.59  E-value=4.6e-06  Score=77.79  Aligned_cols=156  Identities=12%  Similarity=0.072  Sum_probs=82.0

Q ss_pred             HHHHHHHHHHHHHHHHHhHHHHHHHHhCCCccchhhH-hhhh-----HHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHH
Q 021674          123 LIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLF-CVLP-----WLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQ  196 (309)
Q Consensus       123 ~~~~~~~~~~~~~~~~~wlp~~l~~~~g~s~~~~g~~-~~~~-----~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~  196 (309)
                      ..+..++..+-...+....| .+.++++.+..+.+.. .+..     .+...++.++.|+++||+|||+..        .
T Consensus        20 ~~~~~~~~~~d~~~~~~~~~-~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~Grr~~l--------~   90 (434)
T PRK15075         20 VTSGNFLEMFDFFLFGFYAT-AIAKTFFPAGNEFASLMLTFAVFGAGFLMRPLGAIVLGAYIDRVGRRKGL--------I   90 (434)
T ss_pred             HHHHHHHHHHHHHHHHHHHH-HHHHHhCCCCCchHHHHHHHHHHHHHHHHhhhHHHHHHHHhhhhchHHHH--------H
Confidence            44455555555555556666 4556678887765433 2222     222346788999999999987421        1


Q ss_pred             HHhhHHHHHHHHHhhccCchHH--------HHHH-HHHHHhhhhhhhcchhhhhhc-cCCCchHHHHHHHhHhHhhhhhH
Q 021674          197 SIGFLGPAFFLTQLSHVDSPAM--------AVLC-MACSQGTDAFSQSGLYSNHQD-IAPRYSGVLLGLSNTAGVLAGVF  266 (309)
Q Consensus       197 ~~~~~~~~~~~~~~~~~~~~~~--------~~~~-~~~~~~~~~~~~~~~~~~~~~-~~~~~~g~a~~~~~~~~~lgg~i  266 (309)
                       .+..............++...        .++. +..+.+.+. ..+.......| .++++|+.+.++.+...+++..+
T Consensus        91 -~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~-~~~~~~~~~~e~~p~~~rg~~~~~~~~~~~~g~~~  168 (434)
T PRK15075         91 -VTLSIMASGTLLIAFVPGYATIGLAAPLLVLLGRLLQGFSAGV-ELGGVSVYLAEIATPGRKGFYTSWQSASQQVAVVF  168 (434)
T ss_pred             -HHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHhhccccc-cHHHHHHHHHhhCCcccchHHHHHHHHHHHHHHHH
Confidence             111111111111122222211        1111 111222111 11111122233 45678999999988888888777


Q ss_pred             HHhHHHhhc--------ccCCchHHHHHHHH
Q 021674          267 GTAATGYIL--------QHGSWDDVFKVSVG  289 (309)
Q Consensus       267 ~~~~~g~l~--------~~~~~~~~~~~~~~  289 (309)
                      ++.+.+.+.        +..+|+..|.+...
T Consensus       169 g~~~g~~l~~~~~~~~~~~~gWr~~f~~~~~  199 (434)
T PRK15075        169 AALLGYLLNQWLSPAQMAEWGWRIPFLIGCL  199 (434)
T ss_pred             HHHHHHHHHHhCCHHHHhccchHHHHHHHHH
Confidence            777766552        44679988886543

>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter

Probab=98.58  E-value=2.2e-06  Score=80.36  Aligned_cols=169  Identities=13%  Similarity=0.097  Sum_probs=97.9

Q ss_pred             HHHHHHHHHHHHHHHHHhHHHHHHHHhCCCccchhhHhhhhHHHHHHHHHHHHHHHHH----HHHcCCChhhHHHHHHHH
Q 021674          123 LIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADT----LVSKGLSVTTVRKIMQSI  198 (309)
Q Consensus       123 ~~~~~~~~~~~~~~~~~wlp~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~G~l~dr----~~~r~~~~~~~~~~~~~~  198 (309)
                      +....+.....+-....++++|++ .+|.+..+.+.......+...+..++.|+++||    +|||+..        +..
T Consensus         9 ~~~~~~Giq~~~~l~~~~l~~yl~-~lg~~~~~~~~i~~~~~l~~~i~~Pi~G~lSDr~~sr~GRRrp~--------il~   79 (477)
T TIGR01301         9 VASVAAGVQFGWALQLSLLTPYVQ-ELGIPHAWASIIWLCGPLSGLLVQPLVGYLSDRCTSRFGRRRPF--------IAA   79 (477)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHH-HcCCCHHHHHHHHHHHHHHHHHHHhHeeehhcCCCCCCCChHHH--------HHH
Confidence            333444445555556688888885 589999999999999999999999999999995    8877422        111


Q ss_pred             hhHHHHHHHHHhhccCc-------------hHHHHHHHHHHH-----hhhhhhhcchhhhhhccCC-C--chHHHHHHHh
Q 021674          199 GFLGPAFFLTQLSHVDS-------------PAMAVLCMACSQ-----GTDAFSQSGLYSNHQDIAP-R--YSGVLLGLSN  257 (309)
Q Consensus       199 ~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~-~--~~g~a~~~~~  257 (309)
                      +.....+.+..+....+             ....+.....++     ..... ..+.-+...|..| +  +++.+.+..+
T Consensus        80 g~~~~~~~l~ll~~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~lld~~~n~~-~~p~rALiaDl~p~~~~~~~~a~~~~~  158 (477)
T TIGR01301        80 GAALVAFAVILIGFAADIGHLFGDNLDKKTKPRAIIVFVVGFWILDVANNML-QGPCRAFLADLTGGDARRTRIANAYFS  158 (477)
T ss_pred             HHHHHHHHHHHHHhCchhhhhccccccccchhHHHHHHHHHHHHHHHHHHHH-HHHHHHhcccccCchhHHHHHHHHHHH
Confidence            11111111111111111             111111111111     11111 1112222344443 3  2478999889


Q ss_pred             HhHhhhhhHHHhHHHhhc--cc-------------CCchHHHHHHHHHHHHHHHHHHhh
Q 021674          258 TAGVLAGVFGTAATGYIL--QH-------------GSWDDVFKVSVGLYLVGTAVWNLF  301 (309)
Q Consensus       258 ~~~~lgg~i~~~~~g~l~--~~-------------~~~~~~~~~~~~~~~~~~~~~~~~  301 (309)
                      ...++|+.+++.+.++.-  +.             .+.+..|.+.+++.+++.++-.+.
T Consensus       159 ~~~~lG~ilg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~F~i~a~~l~i~~l~t~~~  217 (477)
T TIGR01301       159 FFMAIGNVLGYAAGAYSGLYKIFPFTKTEACGVSCANLKSCFLIDIILLAILTYIALSA  217 (477)
T ss_pred             HHHHHHHHHHHHHHHHHhHHHhcccccccccccccchHHHHHHHHHHHHHHHHHHHeee
Confidence            999999999998887641  10             146778888777777666554444

This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.

>TIGR00805 oat sodium-independent organic anion transporter

Probab=98.51  E-value=2.5e-06  Score=83.27  Aligned_cols=155  Identities=15%  Similarity=0.117  Sum_probs=93.4

Q ss_pred             HHHHHHhCCCccchhhHhhhhHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHhhHHHHHHHHHhhc----------
Q 021674          143 TYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSH----------  212 (309)
Q Consensus       143 ~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------  212 (309)
                      +-++++++++..+.|++.+...++..++.++.|++.||.+||++....  ..+..++.+..+  +.++..          
T Consensus        57 ~~iek~F~lss~~~G~i~s~~~i~~~~~~i~v~~~~~r~~r~~~i~~g--~ll~~lg~ll~a--lphf~~~~y~~~~~~~  132 (633)
T TIGR00805        57 TTIERRFKLSTSSSGLINGSYEIGNLLLIIFVSYFGTKLHRPIVIGIG--CAIMGLGSFLLS--LPHFLSGRYSYSTTVS  132 (633)
T ss_pred             hhhhhhhCCCCCcceeeeehhhHHHHHHHHHHHHhhcccCcceEEEec--HHHHHHHHHHHh--ChHHhcCCcccccccc
Confidence            456778999999999999999999999999999999999877644332  112222221111  111000          


Q ss_pred             ---------------c-----------------C--c-hHHHH--HHHHHHHhhhhhhhcchhhhhhc-cCCCchHHHHH
Q 021674          213 ---------------V-----------------D--S-PAMAV--LCMACSQGTDAFSQSGLYSNHQD-IAPRYSGVLLG  254 (309)
Q Consensus       213 ---------------~-----------------~--~-~~~~~--~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~g~a~~  254 (309)
                                     .                 +  + ....+  .-+..+.+.+.. .+...+...| .++++++...+
T Consensus       133 ~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~GiG~~~~-~~~~~~~i~d~~~~~~~~~~~~  211 (633)
T TIGR00805       133 STGNLSSANSFLCMENLTQALRPTQCPSECQKQHKESLMWLLFLVSQLLRGIGATPI-FPLGISYIDDFAKSKNSPLYIG  211 (633)
T ss_pred             ccccccccccccccCCCCCCccccccccccccccCCCceehhhHHHHHHHhccCCcc-hhcCchhhhccCCccccHHHHH
Confidence                           0                 0  0 11111  111222222211 1112223334 45678999999


Q ss_pred             HHhHhHhhhhhHHHhHHHhhcccC----------------------CchHHHHHHHHHHHHHHHHHHhhc
Q 021674          255 LSNTAGVLAGVFGTAATGYILQHG----------------------SWDDVFKVSVGLYLVGTAVWNLFS  302 (309)
Q Consensus       255 ~~~~~~~lgg~i~~~~~g~l~~~~----------------------~~~~~~~~~~~~~~~~~~~~~~~~  302 (309)
                      +.+....+|..+|+.++|++.+..                      .|...|.+.+++.++..+.+..+.
T Consensus       212 i~~~~~~iG~~lG~llgg~l~~~~~d~~~~~~~~~~l~~~dprWiGaWwl~Fli~g~l~~l~~v~l~~~p  281 (633)
T TIGR00805       212 ILESIAVFGPAFGYLLGSFCLQIYVDTGSVNTEDVILTPTDPRWIGAWWIGFLICGGVALLTSIPFFFFP  281 (633)
T ss_pred             HHHHHHHhhhHHHHHHHHHHHhcccccccCCCCCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHhCc
Confidence            999999999999999999887531                      255567766666665555544444

Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.

>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins

Probab=98.49  E-value=1.5e-05  Score=76.35  Aligned_cols=175  Identities=12%  Similarity=0.100  Sum_probs=90.6

Q ss_pred             hcchHHHHHHHHHHHHHHHHHHHH---HhHHHHHHHHhCCCccchhhHhhhhHHHHHHHHHHHHHHHHHHHHcCCChhhH
Q 021674          115 LSKPPVWALIVSHFCHNWGTFILL---TWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTV  191 (309)
Q Consensus       115 ~~~~~~~~~~~~~~~~~~~~~~~~---~wlp~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~  191 (309)
                      +++|++...+....+.....|...   .=..+++.++.|-+ .+..++.....++..+..++.|.++|.+|||..     
T Consensus        37 ~~s~~~i~~~~~~~~~~~~~~~~~~~~a~~l~~I~~diG~~-~~~~w~~~~~~l~~av~~~~~G~LSDlfGRr~~-----  110 (599)
T PF06609_consen   37 YRSPRFIASFAAFSLAVIAAYFVLVLPASILPYINADIGGS-DNWSWFSTAWTLASAVSFPFVGRLSDLFGRRYF-----  110 (599)
T ss_pred             eeCHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHhcCCC-ccchHHHHHHHHHHHHHHHhhHHHHHHhcchHH-----
Confidence            467777655433333222222222   22234566666776 445556666778899999999999999998731     


Q ss_pred             HHHHHHHhhHHHHHHHHHhhccCchHHHHHH-HHHHHhhhhhhhcchhhhhhcc-CCCchHHHHHHHhHhHhhhhhHHHh
Q 021674          192 RKIMQSIGFLGPAFFLTQLSHVDSPAMAVLC-MACSQGTDAFSQSGLYSNHQDI-APRYSGVLLGLSNTAGVLAGVFGTA  269 (309)
Q Consensus       192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~a~~~~~~~~~lgg~i~~~  269 (309)
                         ++ .+.+...+-.......++....+.. ...+.+.+..  ........|. +.+.|+...++...........+|.
T Consensus       111 ---~i-~g~~l~vvG~Iv~atA~~~~~~iag~~l~GvgaG~~--~~~~~~isEl~p~k~R~~~~~~~~~~~i~~~~~~~~  184 (599)
T PF06609_consen  111 ---FI-IGSLLGVVGSIVCATAQNMNTFIAGMVLYGVGAGVQ--ELAALAISELVPNKWRGLGLAIASIPFIITTWISPL  184 (599)
T ss_pred             ---HH-HHHHHHHhHHHHhhcCCcHHHHHHHHHHHHHhhHHH--HHHHHHHHHhcccchhhhHhHHHHHHHHhhhcccHH
Confidence               11 1111111111111222333222221 1122222111  1111123344 4467877777665544344446666


Q ss_pred             HHHhhcccCCchHHHHHHHHHHHHHHHHHHhh
Q 021674          270 ATGYILQHGSWDDVFKVSVGLYLVGTAVWNLF  301 (309)
Q Consensus       270 ~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~  301 (309)
                      +...+..+.+|++.|.+..+...++.+...++
T Consensus       185 ia~~~~~~~~WRw~~~~~~i~~~i~~vl~~~f  216 (599)
T PF06609_consen  185 IAQLFAAHSGWRWIFYIFIIWSGIALVLIFFF  216 (599)
T ss_pred             HHHHhccCCCcchHHHHHHHHHHHHHHHHHHH
Confidence            66666666789999988777666665444444

Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].

>TIGR00898 2A0119 cation transport protein

Probab=98.47  E-value=1.2e-06  Score=83.22  Aligned_cols=141  Identities=9%  Similarity=-0.011  Sum_probs=85.5

Q ss_pred             HHHHhCCC---ccchhhHhhhhHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHhhHHHHHHHHHhhccCchHHHHH
Q 021674          145 YNQVLHFN---LTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSPAMAVL  221 (309)
Q Consensus       145 l~~~~g~s---~~~~g~~~~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  221 (309)
                      ++++.+++   ..+.++..+...++..++.++.|+++||+|||+.        +. .+.....+........++....++
T Consensus       115 i~~e~~l~c~~~~~~~~~~s~~~~g~~~g~~~~g~l~Dr~Grr~~--------~~-~~~~~~~i~~~~~~~~~~~~~~~~  185 (505)
T TIGR00898       115 IVTEWDLVCEDAWKVDLTQSCFFVGVLLGSFVFGYLSDRFGRKKV--------LL-LSTLVTAVSGVLTAFSPNYTVFLV  185 (505)
T ss_pred             EEEEecceechHHHHHHHHHHHHHHHHHHHHhHHHhhhhccchHH--------HH-HHHHHHHHHHHHHHHcccHHHHHH
Confidence            45678888   7889999999999999999999999999997631        11 111111111111122233333222


Q ss_pred             H-HHHHHhhhhhhhcchhhhhhc-cCCCchHHHHHHHhHhHhhhhhHHHhHHHhhcccCCchHHHHHHHHHHHHHHHHH
Q 021674          222 C-MACSQGTDAFSQSGLYSNHQD-IAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSWDDVFKVSVGLYLVGTAVW  298 (309)
Q Consensus       222 ~-~~~~~~~~~~~~~~~~~~~~~-~~~~~~g~a~~~~~~~~~lgg~i~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~  298 (309)
                      . ...+++.+.. .........| .++++|+.+.++.+....+|..++|.+.+.+.+   |+..+.+.++..++..+.+
T Consensus       186 ~r~l~G~~~~~~-~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~---wr~~~~~~~i~~~~~~~~~  260 (505)
T TIGR00898       186 FRLLVGMGIGGI-WVQAVVLNTEFLPKKQRAIVGTLIQVFFSLGLVLLPLVAYFIPD---WRWLQLAVSLPTFLFFLLS  260 (505)
T ss_pred             HHHHHHhhccch-HHHHHHHhheecChhhhHHHHHHHHHHHHHHHHHHHHHHHHhhH---HHHHHHHHHHHHHHHHHHH
Confidence            2 2222222211 1112222334 355679999998888888888888877655543   8888887776666555444

>TIGR00887 2A0109 phosphate:H+ symporter

Probab=98.46  E-value=1.8e-05  Score=75.35  Aligned_cols=138  Identities=13%  Similarity=0.033  Sum_probs=78.1

Q ss_pred             CCccchhhHhhhhHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHhhHHHHHHHHHhhccCc----hHHHHHH-HHH
Q 021674          151 FNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDS----PAMAVLC-MAC  225 (309)
Q Consensus       151 ~s~~~~g~~~~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~-~~~  225 (309)
                      .+..+.+++.+...++..++.++.|+++||+|||+....      ..+......+... ......    ....+.. +..
T Consensus        53 ~~~~~~~~~~~~~~ig~~ig~~~~g~l~d~~Grr~~~~~------~~~~~~v~~~~~~-~~~~~~~~~~~~~~~~~r~l~  125 (502)
T TIGR00887        53 LPSSVSAAVNGSASIGTLAGQLFFGWLADKLGRKRVYGM------ELIIMIIATVASG-LSPGSSPKSVMATLCFWRFWL  125 (502)
T ss_pred             chHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHH------HHHHHHHHHHHHH-HccCcccchHHHHHHHHHHHH
Confidence            344566888888999999999999999999998732110      0011111111111 111111    1122221 222


Q ss_pred             HHhhhhhhhcchhhhhhc-cCCCchHHHHHHHhHhHhhhhhHHHhHHHhhcc-----------------------cCCch
Q 021674          226 SQGTDAFSQSGLYSNHQD-IAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQ-----------------------HGSWD  281 (309)
Q Consensus       226 ~~~~~~~~~~~~~~~~~~-~~~~~~g~a~~~~~~~~~lgg~i~~~~~g~l~~-----------------------~~~~~  281 (309)
                      +++.+.. .+.......| .+++.|+.+.++.+....+|..+++.+...+..                       ..+|+
T Consensus       126 G~~~g~~-~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~WR  204 (502)
T TIGR00887       126 GVGIGGD-YPLSAIITSEFATKKWRGAMMAAVFAMQGFGILAGAIVALIVLAGFKHSLEAAADEASCTGSCVPAVDYMWR  204 (502)
T ss_pred             HHHHhhh-hHHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccccccccccccchhcccHH
Confidence            3332211 1112222333 456789999999999999999888888765432                       12698


Q ss_pred             HHHHHHHHHHHHHHH
Q 021674          282 DVFKVSVGLYLVGTA  296 (309)
Q Consensus       282 ~~~~~~~~~~~~~~~  296 (309)
                      ..+.+.+...++..+
T Consensus       205 ~~~~~~~ip~~i~~~  219 (502)
T TIGR00887       205 ILIGFGAVPALLALY  219 (502)
T ss_pred             HHHHHHHHHHHHHHH
Confidence            888766655554443

This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).

>TIGR00880 2_A_01_02 Multidrug resistance protein

Probab=98.44  E-value=2.8e-07  Score=70.87  Aligned_cols=70  Identities=27%  Similarity=0.485  Sum_probs=62.3

Q ss_pred             CcccccchhhHHHHHhccCCCcchhHHHHHHHhhhhhHHHHhhhhHHHHhhhcCCcchhHhhhhHHHHHH
Q 021674            2 GIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWF   71 (309)
Q Consensus         2 Gig~g~~~p~~~~~i~~~~p~~~rg~~~g~~~~~~~~g~~lg~~l~~~l~~~~gWr~~F~i~~~~~~v~~   71 (309)
                      |++.+...+....++.|.+|+++|+++.++.+....+|..+++.+.+.+.+..|||+.|++.+.+.++..
T Consensus        62 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  131 (141)
T TIGR00880        62 GFGAAFALVAGAALIADIYPPEERGVALGLMSAGIALGPLLGPPLGGVLAQFLGWRAPFLFLAILALAAF  131 (141)
T ss_pred             HHHHHHHHHhHHHHHHHHCChhhhhHHHHHHHHhHHHHHHHhHHhHHHHhcccchHHHHHHHHHHHHHHH
Confidence            5566777888999999999999999999999999999999999999999999999999998776665543

>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]

Probab=98.41  E-value=3.3e-06  Score=78.91  Aligned_cols=260  Identities=16%  Similarity=0.122  Sum_probs=148.5

Q ss_pred             cccchhhHHHHHhccCCCcchhHHHHHHHhhhhhHHHHhhhhHHHHhhhcCCcchhHhhhhHHHHHHHHHHhhcccCCCC
Q 021674            5 EGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVWLSKAHSSPAE   84 (309)
Q Consensus         5 ~g~~~p~~~~~i~~~~p~~~rg~~~g~~~~~~~~g~~lg~~l~~~l~~~~gWr~~F~i~~~~~~v~~~~~~~~~~~~p~~   84 (309)
                      -+......++++++....++|...+|+.+.....+..+++.+++.+.+..|--..|.+..+..++.........||+-.+
T Consensus       126 ~~~~~s~~~a~vadis~~~~R~~~~gll~~~~~~~~~~~p~~~~~~~~~~~~a~~f~ia~~~~~~~~~y~~~~l~Esl~~  205 (463)
T KOG2816|consen  126 FSAIFSVGFAYVADISSEEERSSSIGLLSGTFGAGLVIGPALGGYLVKFLGIALVFLIAAASGILSLLYMLLFLPESLQE  205 (463)
T ss_pred             hhhhhhhhhhheeeccchhHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHhhccccccCc
Confidence            34667788899999999999999999999999999999999999999999999999886665555433333334443222


Q ss_pred             CCCCCHHHHHHHHhccCCCC-CCCC-CChhHhhcchHHHHHHHHHHHHHHHHHHHHH-hHHHHHHHHhCCCccchhhHhh
Q 021674           85 DPQLRPAEKKLIVSSCASKE-PVKT-IPWGLILSKPPVWALIVSHFCHNWGTFILLT-WMPTYYNQVLHFNLTESGLFCV  161 (309)
Q Consensus        85 ~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-wlp~~l~~~~g~s~~~~g~~~~  161 (309)
                       ++.+.++......++...+ ..+. ...+..-.+|..+.+.+..++....-.+-.. -++.|+...+|++..+.+.+.+
T Consensus       206 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~l~l~l~~~~~~~~~~~~~~~~~~~yl~~~f~w~~~~~s~~~~  284 (463)
T KOG2816|consen  206 -KERSDATLRELTPGSLDSSHVADAFQSLTKVGPDRLLLLLLLVAFLSSLPEAGGASDVLLLYLKAKFGWNKKEFSDLLS  284 (463)
T ss_pred             -cccccccccccCCCcccchhhhhhhhhhcccCCCccchHHHHHHHHHHHHHhcCceeEEEEEEeeecCcCHHHHHHHHH
Confidence             1111000000000000000 0000 0011111234444444444443333222111 3366788889999999998888


Q ss_pred             hhHHHHHHHHHHHH-HHHHHHHHcCCChhhHHHHHHHHhhHHHHHHHHHhhccCchHHHH-HHHHHHHhhhhhhhcchhh
Q 021674          162 LPWLTMAFSANLGG-WIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSPAMAV-LCMACSQGTDAFSQSGLYS  239 (309)
Q Consensus       162 ~~~~~~~ig~~~~G-~l~dr~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~  239 (309)
                      .......++..+.. .+...++.|+         .+..++..-.+........+.++... ......+..  ...+..-+
T Consensus       285 ~~~~~~~i~~l~~~~~l~~~l~~~~---------~i~lGl~~~~~~~~~~af~~~~w~~~~~~v~~~~~~--~~~pa~~s  353 (463)
T KOG2816|consen  285 LVSILGIISQLLLLPLLSSILGEKR---------LISLGLLSEFLQLLLFAFATETWMMFAAGVVVALAG--IVFPAIRA  353 (463)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhhhh---------HhhHHHHHHHHHHHHHHHhccchhhhHHHHHHHhhc--chhHHHHh
Confidence            88888888887776 7777777653         11122221111111122222333221 111111111  11121212


Q ss_pred             h-hhccCCCchHHHHHHHhHhHhhhhhHHHhHHHhhcc
Q 021674          240 N-HQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQ  276 (309)
Q Consensus       240 ~-~~~~~~~~~g~a~~~~~~~~~lgg~i~~~~~g~l~~  276 (309)
                      . .....++++|.+.++...+..+.+.++|.+.+.+..
T Consensus       354 ~~s~~v~~~e~g~v~~~is~i~~l~~~~~~~~~~~i~~  391 (463)
T KOG2816|consen  354 FASILVSPEEQGKVFGIISGIEGLSGVVSPALYGNIFA  391 (463)
T ss_pred             HHHhhcccccccchhhHHHHHHHHhhhhhHHHHHHHHH
Confidence            1 223467789999999999999999999999888743

>PRK09669 putative symporter YagG; Provisional

Probab=98.40  E-value=2.8e-06  Score=79.47  Aligned_cols=52  Identities=15%  Similarity=0.211  Sum_probs=46.1

Q ss_pred             HHHHHHHHHHhHHHHHHHHhCCCccchhhHhhhhHHHHHHHHHHHHHHHHHH
Q 021674          130 HNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTL  181 (309)
Q Consensus       130 ~~~~~~~~~~wlp~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~G~l~dr~  181 (309)
                      .+.....+.+|++.|+.++.|+|+..+|.++.+.-+...+..++.|+++||.
T Consensus        21 ~~~~~~~~~~~l~~~~t~~~gls~~~~g~i~~i~~i~dai~dp~~G~lsD~~   72 (444)
T PRK09669         21 CNLVWQTVMLFLAYFYTDVFGLSAAIMGTMFLVVRVLDAVTDPLMGALVDRT   72 (444)
T ss_pred             hhHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHcccceeeEeeecC
Confidence            3444556678999999999999999999999999999999999999999994

>TIGR00883 2A0106 metabolite-proton symporter

Probab=98.38  E-value=2.5e-05  Score=70.94  Aligned_cols=54  Identities=17%  Similarity=0.204  Sum_probs=39.6

Q ss_pred             cCCCchHHHHHHHhHhHhhhhhHHHhHHHhhc--------ccCCchHHHHHHHHHHHHHHHH
Q 021674          244 IAPRYSGVLLGLSNTAGVLAGVFGTAATGYIL--------QHGSWDDVFKVSVGLYLVGTAV  297 (309)
Q Consensus       244 ~~~~~~g~a~~~~~~~~~lgg~i~~~~~g~l~--------~~~~~~~~~~~~~~~~~~~~~~  297 (309)
                      .++++|+...+..+....+|..+++.+.+.+.        +..+|+..|.+.+.+.+++.+.
T Consensus       125 ~~~~~r~~~~~~~~~~~~~G~~i~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~  186 (394)
T TIGR00883       125 APPGKRGFYGSFQQVGAPVGLLLAALTVLLLSYLLGDDALLEWGWRIPFLVSAVLVLIGLYL  186 (394)
T ss_pred             CCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHhhccchHHHHHHHHHHHHHHHHH
Confidence            45678999999988888888888888766553        2357888888776666555544

This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.

>PRK10429 melibiose:sodium symporter; Provisional

Probab=98.36  E-value=6.9e-06  Score=77.54  Aligned_cols=58  Identities=17%  Similarity=0.350  Sum_probs=49.2

Q ss_pred             HHHHHHHHHHHHhHHHHHHHHhCCCccchhhHhhhhHHHHHHHHHHHHHHHHHH----HHcC
Q 021674          128 FCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTL----VSKG  185 (309)
Q Consensus       128 ~~~~~~~~~~~~wlp~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~G~l~dr~----~~r~  185 (309)
                      +..+.....+.+|++.|++++.|+|+...|.++.+.-+...+..++.|+++||.    |||+
T Consensus        16 ~~~~~~~~~~~~~l~~yyt~v~Gls~~~vg~i~~i~ri~dai~dp~~G~lsD~t~sr~Grrr   77 (473)
T PRK10429         16 FGKDFAIGIVYMYLMYYYTDVVGLSVGLVGTLFLVARIWDAINDPIMGWIVNNTRSRWGKFK   77 (473)
T ss_pred             hHHhHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhhchheeehhcCCCCCCCcc
Confidence            334455566778999999999999999999999999999999999999999954    6654

>TIGR00788 fbt folate/biopterin transporter

Probab=98.32  E-value=1.3e-05  Score=75.48  Aligned_cols=174  Identities=16%  Similarity=0.109  Sum_probs=97.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHhHHHHHHHHhCCCccchhhHhhhhHHHHHHHHHHHHHHHHHHH---HcCCChhhHHHHHHH
Q 021674          121 WALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLV---SKGLSVTTVRKIMQS  197 (309)
Q Consensus       121 ~~~~~~~~~~~~~~~~~~~wlp~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~G~l~dr~~---~r~~~~~~~~~~~~~  197 (309)
                      ..+...++..... +....-++.++++++|+|+.+.+.+.+...+.-.+ .++.|.++||++   +||++      .+. 
T Consensus        29 ~~~~~~y~~qGl~-~l~~~~~~~~l~~~lg~s~~~i~~~~sl~~lpw~~-K~l~g~l~D~~~i~G~rRr~------~l~-   99 (468)
T TIGR00788        29 AIGLQVLFVKGIA-GLMRLPLSPMLTDDLGLDGARYQRLVGLSSLGWAL-KPFAGVMSDTFPLFGYTKRW------YLV-   99 (468)
T ss_pred             HHHHHHHHHhhHH-HHhhhhhhHHHHHhcCCCHHHHHHHHHHHHHHHHH-HHHHHHHHHhcCCCCccchH------HHH-
Confidence            3444456776666 77778899999999999999998888877777766 556999999995   33211      111 


Q ss_pred             HhhHHH-HHHHHHhhccCc-hHHHH-HHHHHHHhhhhh--hhcchhhhhhccCCCchHHHHHHHhHhHhhhhhHHHhHHH
Q 021674          198 IGFLGP-AFFLTQLSHVDS-PAMAV-LCMACSQGTDAF--SQSGLYSNHQDIAPRYSGVLLGLSNTAGVLAGVFGTAATG  272 (309)
Q Consensus       198 ~~~~~~-~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~g~a~~~~~~~~~lgg~i~~~~~g  272 (309)
                      ...+.. +..+......++ ..... .++...++....  ...+.+....+.+++..+...+......++|..+++.+.|
T Consensus       100 ~~~~l~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~a~~dv~~da~~~e~~~~~~~~~~~~~s~~~~~~~~G~~vg~~l~G  179 (468)
T TIGR00788       100 LSGLLGSAILYGLLPGKVSSAKVAAAFIFLAALAKALYDVLVDSLYSERIRESPSAGPSLVSWMWGASATGGLISSLLGG  179 (468)
T ss_pred             HHHHHHHHHHHHhcccccchHHHHHHHHHHHHHHHHHHHHhHHHHHhhhhhcCCCcCCCeeeHHHHHHHHHHHHHHHHHH
Confidence            111111 112121222122 22222 222222221111  1111222111111222232333333345578899999999


Q ss_pred             hhcccCCchHHHHHHHHHHHHHHHHHHhhcC
Q 021674          273 YILQHGSWDDVFKVSVGLYLVGTAVWNLFST  303 (309)
Q Consensus       273 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  303 (309)
                      .+.+..+|+..|.+.+++.++..+...++.+
T Consensus       180 ~l~~~~~~~~~f~~~a~l~ll~~~~~~~~~E  210 (468)
T TIGR00788       180 PLLDKTLTRILFLITAALLLLQLFVSNLSKE  210 (468)
T ss_pred             HHHHhcCcchHHHHHHHHHHHHHHHHHhccc
Confidence            9999888999998887777766555454443

The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.

>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]

Probab=98.28  E-value=9.9e-05  Score=68.31  Aligned_cols=64  Identities=23%  Similarity=0.482  Sum_probs=56.6

Q ss_pred             CcccccchhhHHHHHhccCCCc--chhHHHHHHHhhhhhHHHHhhhhHHHHhhhcCCcchhHhhhh
Q 021674            2 GIGEGVAMPAMNNILSKWVPVA--ERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGS   65 (309)
Q Consensus         2 Gig~g~~~p~~~~~i~~~~p~~--~rg~~~g~~~~~~~~g~~lg~~l~~~l~~~~gWr~~F~i~~~   65 (309)
                      ++|.|..=|+..++++|.+||+  ||-...+++..+.++|+.++|.+.+++.+.+||+..|-+.++
T Consensus       128 ~iG~Gl~K~NiS~llg~ly~~~DprrD~gFt~fY~~iNiGsl~~p~i~~~~~~~~g~~~gF~~aav  193 (498)
T COG3104         128 IVGTGLFKPNISSLLGELYPKDDPRRDGGFTLFYMGINIGSLIAPIITGLLAINYGWHVGFGLAAV  193 (498)
T ss_pred             HhccccccccHHHHHHHhcCCCCcccCCCccEEEEEeehHHHHHHHHHHHHHHhhCHHHHHHHHHH
Confidence            4788899999999999999744  467888999999999999999999999999999999997443

>PF13347 MFS_2: MFS/sugar transport protein

Probab=98.28  E-value=4.3e-06  Score=77.81  Aligned_cols=163  Identities=15%  Similarity=0.107  Sum_probs=95.7

Q ss_pred             HHHHHHHHHhHHHHHHHHhCCCccchhhHhhhhHHHHHHHHHHHHHHHH----HHHHcCCChhhHHHHHHHHhhHHHHHH
Q 021674          131 NWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIAD----TLVSKGLSVTTVRKIMQSIGFLGPAFF  206 (309)
Q Consensus       131 ~~~~~~~~~wlp~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~G~l~d----r~~~r~~~~~~~~~~~~~~~~~~~~~~  206 (309)
                      +.....+.+|++.|+++..|+++...|++.....+...+..++.|+++|    |+|||+.....        +.+..++.
T Consensus        14 ~~~~~~~~~~~~~f~~~~~gl~~~~~g~i~~~~~i~dai~dp~~G~~sDr~~tr~Grrrp~~l~--------g~i~~~~~   85 (428)
T PF13347_consen   14 NMIWSLLSSYLLYFYTDVLGLSPALAGLILLVGRIWDAITDPLIGYLSDRTRTRWGRRRPWILI--------GAILLALS   85 (428)
T ss_pred             HHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHhhhhcCCcEEEEEeeecccccccceEeeh--------hhHHHHHH
Confidence            3444556679999999999999999999999999999999999999999    67877544321        11111111


Q ss_pred             HHHhhcc-C---ch----HHHHH-HHHHHHhhhhhhhcchhhhhhcc--CCCchHHHHHHHhHhHhhhhhHHHhHHHhhc
Q 021674          207 LTQLSHV-D---SP----AMAVL-CMACSQGTDAFSQSGLYSNHQDI--APRYSGVLLGLSNTAGVLAGVFGTAATGYIL  275 (309)
Q Consensus       207 ~~~~~~~-~---~~----~~~~~-~~~~~~~~~~~~~~~~~~~~~~~--~~~~~g~a~~~~~~~~~lgg~i~~~~~g~l~  275 (309)
                      ...+... .   +.    .+..+ ..+...+. .+...+..+...|.  ++++|....+..+....+|+.+...+.+.+.
T Consensus        86 ~~llf~~~p~~~~~~~~~~~~~~~~~l~~~~~-t~~~i~~~al~~~lt~~~~~R~~l~~~~~~~~~~g~~l~~~~~~~l~  164 (428)
T PF13347_consen   86 FFLLFSPPPAGLSFTAKLVWLFVFYILFDIAY-TFVQIPYNALIPELTPDPDERTRLSSWRMIFSMIGSLLASFLAPILV  164 (428)
T ss_pred             HHHhhccccchhhhhhHHHHHHHHHHHHHHhh-hhccCchhhcCccccccHhhhhhHHHHHHHHHHHHHHHHHHHhhhhh
Confidence            1111111 0   11    11111 11111111 11111112222232  3457888888878878887776666766666


Q ss_pred             cc-C------CchHHHHHHHHHHHHHHHHHHhhc
Q 021674          276 QH-G------SWDDVFKVSVGLYLVGTAVWNLFS  302 (309)
Q Consensus       276 ~~-~------~~~~~~~~~~~~~~~~~~~~~~~~  302 (309)
                      +. +      +|.....+.+++.+++.++..+..
T Consensus       165 ~~~g~~~~~~~~~~~~~v~~iv~~v~~~i~~~~~  198 (428)
T PF13347_consen  165 SWFGGGDTSNGYRWMALVLAIVGLVFFLITFFFV  198 (428)
T ss_pred             hhhccCccchHHHHHHHHHHHHHHHHhhhhhhee
Confidence            43 1      467666766766666665544443

>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]

Probab=98.28  E-value=1.1e-05  Score=75.54  Aligned_cols=150  Identities=15%  Similarity=0.193  Sum_probs=100.6

Q ss_pred             HhCCCccchhhHhhhhHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHhhHHHHHH---HHHhhccCchHHHHHH-H
Q 021674          148 VLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFF---LTQLSHVDSPAMAVLC-M  223 (309)
Q Consensus       148 ~~g~s~~~~g~~~~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~-~  223 (309)
                      .+.+|..+.+++.+....+..++.+.+|++.||+|.|+.         ...+.+..++.   ........ .+..+++ +
T Consensus        67 ~~~ws~~~k~~i~ss~~~G~i~~~iP~g~l~~k~G~r~v---------~~~~~~~sa~~t~l~P~aa~~~-~~~~~~~R~  136 (466)
T KOG2532|consen   67 EYDWSSTEKGLIFSSFFWGYILGQIPGGYLADKFGARRV---------FFISGLISALLTLLTPLAASIG-FYLLLVLRF  136 (466)
T ss_pred             eecCCHHHHHHHHHHHHHHHHHHHcCcHHHHHHcCchHH---------HHHHHHHHHHHHHHHHHHHHhc-chhhHHHHH
Confidence            577889999999999999999999999999999997632         11222222211   11111111 1111111 1


Q ss_pred             HHHHhhhhhhhcchhhhhh-ccCCCchHHHHHHHhHhHhhhhhHHHhHHHhhccc-CCchHHHHHHHHHHHHHHHHHHhh
Q 021674          224 ACSQGTDAFSQSGLYSNHQ-DIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQH-GSWDDVFKVSVGLYLVGTAVWNLF  301 (309)
Q Consensus       224 ~~~~~~~~~~~~~~~~~~~-~~~~~~~g~a~~~~~~~~~lgg~i~~~~~g~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~  301 (309)
                      .-|++.+. ..+.+-.... =.+|++|+...++...+.++|.+++-++.|++.+. .||.++|.+.+++.++-.++|..+
T Consensus       137 lqGl~~g~-~~pa~~~i~~~W~P~~Ers~~~ail~~g~q~g~v~~mp~sg~lc~s~~GW~sifY~~g~~g~i~~~~w~~~  215 (466)
T KOG2532|consen  137 LQGLGQGV-LFPAIGSILAKWAPPNERSTFIAILTAGSQLGTIITMPVSGLLCESSLGWPSIFYVFGIVGLIWFILWFLF  215 (466)
T ss_pred             HhHHHHhH-HHhhhhceeeeECCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhccCCCCchHHHHHHHHHHHHHHHHHHH
Confidence            11222111 1111111111 24668999999999999999999999999999998 899999999999998888899888


Q ss_pred             cCCcccc
Q 021674          302 STGEKVV  308 (309)
Q Consensus       302 ~~~~~~~  308 (309)
                      .++++..
T Consensus       216 ~~d~P~~  222 (466)
T KOG2532|consen  216 YSDSPSK  222 (466)
T ss_pred             hcCCccc
Confidence            7776653

>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]

Probab=98.24  E-value=1.7e-06  Score=78.90  Aligned_cols=147  Identities=18%  Similarity=0.177  Sum_probs=94.4

Q ss_pred             HHHHhCCCccchhhHhhhhHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHhhHHHHHHHHHhhccCchHHHHHH-H
Q 021674          145 YNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSPAMAVLC-M  223 (309)
Q Consensus       145 l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~  223 (309)
                      .++.+|.++++.|++.....+...+.+++.|++.||+.|+++...... ++.      .+.+...+  ....+..+++ .
T Consensus        59 v~~~fni~~s~~Gll~~vf~v~~~i~sPl~gyLadryNR~~v~~vG~~-iW~------~Av~~~~f--s~~Fwq~~l~R~  129 (493)
T KOG1330|consen   59 VQTYFNISDSELGLLQTVFIVVFMIASPLFGYLADRYNRKRVIAVGIF-IWT------LAVFASGF--SNHFWQVLLCRG  129 (493)
T ss_pred             HHHhcCCCchhccchhHHHHHHHHHHHHHHHHHHhhcCcceEEeeHHH-HHH------HHHHHHHH--HHHHHHHHHHHH
Confidence            567789999999999999999999999999999999987654332210 111      11111111  1122222222 2


Q ss_pred             HHHHhhhhhhhcchhhhhhccCC-CchHHHHHHHhHhHhhhhhHHHhHHHhhcccCC-chHHHHHHHHHHHHHHHHHHhh
Q 021674          224 ACSQGTDAFSQSGLYSNHQDIAP-RYSGVLLGLSNTAGVLAGVFGTAATGYILQHGS-WDDVFKVSVGLYLVGTAVWNLF  301 (309)
Q Consensus       224 ~~~~~~~~~~~~~~~~~~~~~~~-~~~g~a~~~~~~~~~lgg~i~~~~~g~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~  301 (309)
                      ..+.|-..+ .+...+...|..+ +.|+...++.|+...+|..+|-...+.+.++.+ |+++|.+.+++.++..+...++
T Consensus       130 ~vGiGeAs~-~~ia~s~IaD~f~~~~Rs~~~~ify~~ipvGsglG~vvgs~va~~~~~Wr~af~~~avl~vi~~~L~~~f  208 (493)
T KOG1330|consen  130 FVGIGEASY-SPIAPSLIADSFPDDKRSRVLGIFYFAIPVGSGLGYVVGSVVASLTFWWRWAFRGSAVLGVIVGLLVFLF  208 (493)
T ss_pred             Hhccchhhh-cccchhHhhhcCcchhhhHHHHHhhhhcccccceeEEeeeeeccCccceEEEEEeehHHHHHHHHHHHhh
Confidence            222222112 1222233445544 579999999999999999998888888877744 9999988777776665444444

>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]

Probab=98.23  E-value=6.5e-06  Score=73.82  Aligned_cols=143  Identities=19%  Similarity=0.173  Sum_probs=92.0

Q ss_pred             hCCCccchhhHhhhhHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHhhHHHHHHHHHhhccCchHHHHHHHHH-HH
Q 021674          149 LHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSPAMAVLCMAC-SQ  227 (309)
Q Consensus       149 ~g~s~~~~g~~~~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~  227 (309)
                      ++-+.++.|+++....+...+.+++.|.++||+|.|         ..+.+++......-..+...++..+.++.-.. +.
T Consensus       101 ~~~e~~~iG~LFaskA~~qllvnp~~G~l~~~iGy~---------ipm~~Gl~vmf~sTilFafg~sy~~l~vAR~LQgv  171 (464)
T KOG3764|consen  101 LDRENTQIGLLFASKALVQLLVNPFFGNLIDRIGYK---------IPMVAGLFVMFLSTILFAFGNSYPMLFVARSLQGV  171 (464)
T ss_pred             ccccccchhHHHHHHHHHHHHhcccchhhHHHhccc---------cHHHHHHHHHHHHHHHHHHcchhHHHHHHHHHhhh
Confidence            345677899999999999999999999999999965         23333333222221222223333332222222 11


Q ss_pred             hhhhhhhcchhhhhhccCC--CchHHHHHHHhHhHhhhhhHHHhHHHhhcccCCchHHHHHHHHHHHHHHHHHHhh
Q 021674          228 GTDAFSQSGLYSNHQDIAP--RYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSWDDVFKVSVGLYLVGTAVWNLF  301 (309)
Q Consensus       228 ~~~~~~~~~~~~~~~~~~~--~~~g~a~~~~~~~~~lgg~i~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~  301 (309)
                      +. ++..+.-.+...+..|  ++|+.++|+.-.+..+|-.++|..+|.+=|..|+...|.+.+++.++-...-.+.
T Consensus       172 gs-A~~~tsglamlAd~f~~d~er~~vmGialgfislG~lvgPpfGGilYe~~Gk~aPFlVL~~v~Lld~~L~l~v  246 (464)
T KOG3764|consen  172 GS-AFADTSGLAMLADVFPEDNERGSVMGIALGFISLGVLVGPPFGGILYEFAGKSAPFLVLAIVLLLDGALQLLV  246 (464)
T ss_pred             hH-HHHHhhhHHHHHHHcccchhhhHHHHHHHHHHhccceecCCcccchHhhcCCcCcHHHHHHHHHHHHHHHHhe
Confidence            21 2222222222223333  3689999999999999999999999999999899999999888877665443333

>PRK11462 putative transporter; Provisional

Probab=98.22  E-value=5.1e-05  Score=71.39  Aligned_cols=157  Identities=12%  Similarity=-0.008  Sum_probs=88.9

Q ss_pred             HHHHHHHHHhHHHHHHHHhCCCccchhhHhhhhHHHHHHHHHHHHHHHHHH----HHcCCChhhHHHHHHHHhhHHHHHH
Q 021674          131 NWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTL----VSKGLSVTTVRKIMQSIGFLGPAFF  206 (309)
Q Consensus       131 ~~~~~~~~~wlp~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~G~l~dr~----~~r~~~~~~~~~~~~~~~~~~~~~~  206 (309)
                      +.......+|++.|+.+..|+++..+|.++.+.-+.-.+.-++.|+++||.    ||||.        ++..+.+..++.
T Consensus        22 ~~~~~~~~~~l~~fyt~~~Gl~~~~~g~i~~~~ri~Dai~Dp~~G~~~D~t~~r~Gr~rp--------~il~g~i~~~i~   93 (460)
T PRK11462         22 HIIFDNVMLYMMFFYTDIFGIPAGFVGTMFLVARALDAISDPCMGLLADRTRSRWGKFRP--------WVLFGALPFGIV   93 (460)
T ss_pred             hHHHHHHHHHHHHHHHHhhCCCHHHHHHHHHHHHHHHHHHhhhheehhccCCCCCCCcch--------hHhHHHHHHHHH
Confidence            344455668999999999999999999999999999999999999999985    33322        222221111111


Q ss_pred             HHHhhc-cC-c--h--HHHHHH-HHHHHhhhhhhhcchhh--hhhccCCCchHHHHHHHhHhHhhhhhHHHhHHHhhccc
Q 021674          207 LTQLSH-VD-S--P--AMAVLC-MACSQGTDAFSQSGLYS--NHQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQH  277 (309)
Q Consensus       207 ~~~~~~-~~-~--~--~~~~~~-~~~~~~~~~~~~~~~~~--~~~~~~~~~~g~a~~~~~~~~~lgg~i~~~~~g~l~~~  277 (309)
                      ...+.. .+ +  .  .+.... .....+.... ..+..+  .+...++++|....+....++++|+.+++.+...+++.
T Consensus        94 ~~llf~~p~~s~~~~~~y~~~~~~~~~~~~t~~-~ipy~al~~~lt~d~~eRt~l~s~r~~~~~iG~~~~~~~~~plv~~  172 (460)
T PRK11462         94 CVLAYSTPDLSMNGKMIYAAITYTLLTLLYTVV-NIPYCALGGVITNDPTQRISLQSWRFVLATAGGMLSTVLMMPLVNL  172 (460)
T ss_pred             HHHHHhCCCCCcchHHHHHHHHHHHHHHHHHHH-hccHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            111111 11 1  1  111111 1111111111 112222  22234577899999988888888887777665554432


Q ss_pred             -------CCchHHHHHHHHHHHHHHH
Q 021674          278 -------GSWDDVFKVSVGLYLVGTA  296 (309)
Q Consensus       278 -------~~~~~~~~~~~~~~~~~~~  296 (309)
                             .+|.....+.+++.+++.+
T Consensus       173 ~g~~~~~~g~~~~~~i~~ii~~i~~~  198 (460)
T PRK11462        173 IGGDNKPLGFQGGIAVLSVVAFMMLA  198 (460)
T ss_pred             hCCCchhhhHHHHHHHHHHHHHHHHH
Confidence                   1355444444444444443

>PF12832 MFS_1_like: MFS_1 like family

Probab=98.15  E-value=1.4e-05  Score=55.52  Aligned_cols=62  Identities=21%  Similarity=0.275  Sum_probs=53.3

Q ss_pred             HHHHHHHHHHHHHHHHHhHHHHHHHHhCCCccchhhHhhhhHHHHHHHHHHHHHHHHHHHHcC
Q 021674          123 LIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKG  185 (309)
Q Consensus       123 ~~~~~~~~~~~~~~~~~wlp~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~G~l~dr~~~r~  185 (309)
                      +-..+++...+.-.+..++|.|+++ .|+|+.++|.+..+..+...+++++.|+++||+++++
T Consensus         5 lk~~yf~~f~~~g~~~Pfl~~~~~~-~Gl~~~~iGil~~i~~~~~~~~~pl~g~laDk~~~~~   66 (77)
T PF12832_consen    5 LKAFYFFYFAALGCLYPFLPLYLKQ-LGLSPSQIGILSAIRPLIRFLAPPLWGFLADKFGKRK   66 (77)
T ss_pred             HHHHHHHHHHHHHHHHhhhhHhhhh-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCccH
Confidence            3344566666677788999999986 7999999999999999999999999999999998763

>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]

Probab=98.11  E-value=0.00026  Score=63.88  Aligned_cols=141  Identities=14%  Similarity=0.145  Sum_probs=82.4

Q ss_pred             HHHHHHHHH-HHHHHhHHHHHHHHhCCCccchhhHhhhhHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHhhHHHH
Q 021674          126 SHFCHNWGT-FILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPA  204 (309)
Q Consensus       126 ~~~~~~~~~-~~~~~wlp~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~~~~~~~~  204 (309)
                      ..++..|++ ....--+-+.+++.++++..|++++......+..+.++..|++.+|++.|+       .++  .++.+.+
T Consensus        19 t~lFfl~G~~~~l~diLip~l~~~f~ls~~~a~liqfaff~gYf~~~lpa~~~~kk~gyk~-------gi~--lgL~l~a   89 (422)
T COG0738          19 TSLFFLWGFITCLNDILIPHLKEVFDLTYFEASLIQFAFFGGYFIMSLPAGLLIKKLGYKA-------GIV--LGLLLYA   89 (422)
T ss_pred             HHHHHHHHHHhhcchhhHHHHHHHhCccHHHHHHHHHHHHHHHHHHhccHHHHHHHhhhHH-------HHH--HHHHHHH
Confidence            333444443 334445566778899999999999999999999999999999999999763       122  2222222


Q ss_pred             HHHHHhh---ccCchHHHH-HHHHHHHhhhhhhhcchhhhhhcc-CCCchHHHHHHHhHhHhhhhhHHHhHHHhhcc
Q 021674          205 FFLTQLS---HVDSPAMAV-LCMACSQGTDAFSQSGLYSNHQDI-APRYSGVLLGLSNTAGVLAGVFGTAATGYILQ  276 (309)
Q Consensus       205 ~~~~~~~---~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~a~~~~~~~~~lgg~i~~~~~g~l~~  276 (309)
                      .....++   ...+....+ .++..+.|.+.. .+...+..... +++....=+.+.+....+|+.++|.+++.++.
T Consensus        90 vg~~lF~pAa~~~~y~~FL~~lFila~Gi~~L-etaaNp~v~~lg~~~~a~~rlnl~q~fn~lGa~~gp~~g~~lil  165 (422)
T COG0738          90 VGAALFWPAASSKSYGFFLVALFILASGIGLL-ETAANPYVTLLGKPESAAFRLNLAQAFNGLGAILGPLLGSSLIL  165 (422)
T ss_pred             HHHHHHhhhhhhhhHHHHHHHHHHHHhhhHHH-HhccchHHHHhCCchhHHHHHHHHHHhhhhHHHHHHHHHHHHHH
Confidence            2222121   111222222 222233333322 11111222222 33334444567777888899999999999887

>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]

Probab=98.10  E-value=0.00016  Score=64.38  Aligned_cols=151  Identities=20%  Similarity=0.209  Sum_probs=97.0

Q ss_pred             HHHHhCCCccchhhHhhhhHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHhhHHHHHHHHHhhccCchHHHHHHHH
Q 021674          145 YNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSPAMAVLCMA  224 (309)
Q Consensus       145 l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (309)
                      +++++|.|.+.+|++..++.++..+.+++..++..|++.++       ...  .+++..+.-...-.....+....-...
T Consensus        38 Ir~~~gls~s~aGlLTtLPll~fg~~ap~a~~Lar~~g~er-------~l~--~~Llli~~G~~iR~~~~~~~L~~gt~l  108 (395)
T COG2807          38 IRQDLGLSFSVAGLLTTLPLLAFGLFAPAAPRLARRFGEER-------SLF--LALLLIAAGILIRSLGGLPLLFLGTLL  108 (395)
T ss_pred             HHHHhcccHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhhHH-------HHH--HHHHHHHHHHHHHhcccHHHHHHHHHH
Confidence            55778999999999999999999999999999999999652       111  111111111111011111111111111


Q ss_pred             HHHhhhhhhhcchhhhhhccCCCchHHHHHHHhHhHhhhhhHHHhHHHhhccc-CCchHHHHHHHHHHHHHHHHHHhhcC
Q 021674          225 CSQGTDAFSQSGLYSNHQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQH-GSWDDVFKVSVGLYLVGTAVWNLFST  303 (309)
Q Consensus       225 ~~~~~~~~~~~~~~~~~~~~~~~~~g~a~~~~~~~~~lgg~i~~~~~g~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~  303 (309)
                      .+.+.. ..+..+-+...+.-|++.+..+|+..+.-.+++++++.+.-.+.++ ++|+....+.+...+++.++|..-..
T Consensus       109 ~G~gIa-v~nVLLPslIK~~Fpk~~~~mtglYs~sl~~~aaLaa~lavpla~~~~gW~~aL~~WAl~allAl~~WlPq~~  187 (395)
T COG2807         109 AGAGIA-VINVLLPSLIKRDFPKRVGLMTGLYSTSLGAGAALAAALAVPLAQHSGGWRGALGFWALLALLALLIWLPQAL  187 (395)
T ss_pred             HHhhHH-HHHHhhhHHHHhhcccchhhHHhHHHHHHHHHHHHHhhhhhHHHHhhccHHHHHHHHHHHHHHHHHHHhhhcc
Confidence            222221 2222122223444688889999999999999999999888888777 47998888888888888877765533


Q ss_pred             Cc
Q 021674          304 GE  305 (309)
Q Consensus       304 ~~  305 (309)
                      |+
T Consensus       188 r~  189 (395)
T COG2807         188 RE  189 (395)
T ss_pred             cc
Confidence            43

>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins

Probab=98.08  E-value=3.9e-05  Score=71.59  Aligned_cols=50  Identities=24%  Similarity=0.303  Sum_probs=43.6

Q ss_pred             CcchhHHHHHHHhhhhhHHHHhhhhHHHHhhhcCCcchhHhhhhHHHHHH
Q 021674           22 VAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWF   71 (309)
Q Consensus        22 ~~~rg~~~g~~~~~~~~g~~lg~~l~~~l~~~~gWr~~F~i~~~~~~v~~   71 (309)
                      +++||.-++.......+|++++..++|.+.+..++|..|.+.+.+..+..
T Consensus       119 p~~~g~lqS~~~~~~~~G~lv~~~l~G~l~~~~~~~~~f~i~~~~~~l~~  168 (433)
T PF03092_consen  119 PESRGDLQSFVWGVRSVGSLVGSLLSGPLLDSFGPQGVFLISAALPLLML  168 (433)
T ss_pred             CchhHHHHHHHHHHHHHHHHHHHHhhhhhhhcCCCeEEehHHHHHHHHHH
Confidence            34489999999999999999999999999999999999998777766543

Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).

>PF03825 Nuc_H_symport: Nucleoside H+ symporter

Probab=98.07  E-value=0.00019  Score=66.18  Aligned_cols=62  Identities=24%  Similarity=0.260  Sum_probs=51.3

Q ss_pred             HHHHHHHHHHHHHHHHHHhHHHHHHHHhCCCccchhhHhhhhHHHHHHHHHHHHHHHHHHHHc
Q 021674          122 ALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSK  184 (309)
Q Consensus       122 ~~~~~~~~~~~~~~~~~~wlp~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~G~l~dr~~~r  184 (309)
                      ++...+++.....-....++|.||++ .|+|..|+|.+++...+...++.++.|+++||.+++
T Consensus         6 rLs~~~f~~f~~~G~~~p~~~~~L~~-~G~s~~qIG~l~a~~~~~~i~~~~~~g~~aDr~~~~   67 (400)
T PF03825_consen    6 RLSLMYFLYFFAYGAFLPYLPLYLES-RGFSGTQIGILLAVGPLARIVSPPFWGAIADRFGSA   67 (400)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHh-CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhH
Confidence            44555555555555667889999987 689999999999999999999999999999998754

>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]

Probab=98.05  E-value=4.9e-05  Score=72.62  Aligned_cols=138  Identities=14%  Similarity=0.052  Sum_probs=87.0

Q ss_pred             HHhCCCccchhhHhhhhHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHhhHHHHHHHHHhhccCchHHHHHHH-HH
Q 021674          147 QVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSPAMAVLCM-AC  225 (309)
Q Consensus       147 ~~~g~s~~~~g~~~~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~  225 (309)
                      +..+.+.....+..++..++..+|+++.|.++||+|||+.         ..+++....++........+....+.+- ..
T Consensus       111 ~~~c~~~~~~~~~~s~~~~G~~vG~~i~g~lsD~~GRk~~---------~~~~~~~~~i~~~~~a~a~~~~~~~~~Rfl~  181 (521)
T KOG0255|consen  111 NLVCDSSTLVALGQSLFFLGVLVGSLIFGPLSDRFGRKPV---------LLVSLLLFIIFGILTAFAPNYWMFLIFRFLS  181 (521)
T ss_pred             ceeeCcHhHHHHHHHHHHHHHHHHHhhheehHhhcccHHH---------HHHHHHHHHHHHHHHHHhCcHHHHHHHHHHH
Confidence            4455666777888888999999999999999999997732         1122222222222222333433333322 22


Q ss_pred             HHhhhhhhhcchhhhh-hccCCCchHHHHHHHhHhHhhhhhHHHhHHHhhcccCCchHHHHHHHHHHHHHHHH
Q 021674          226 SQGTDAFSQSGLYSNH-QDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSWDDVFKVSVGLYLVGTAV  297 (309)
Q Consensus       226 ~~~~~~~~~~~~~~~~-~~~~~~~~g~a~~~~~~~~~lgg~i~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~  297 (309)
                      +++..... ...+... +-..|++|+.+..+ ......++.++++..+++..  +|+..+++.....++..+.
T Consensus       182 G~~~~~~~-~~~~~~~~E~~~~~~R~~~~~~-~~~~~~~~~~~~~~~a~~~~--~Wr~~~~~~~~~~~~~~~~  250 (521)
T KOG0255|consen  182 GFFGSGPL-TVGFGLVAEIVSPKQRGLALTL-GGFFFVGGLMLPAGAAYITR--DWRWLFWIISIPSGLFLLL  250 (521)
T ss_pred             Hhhccchh-HHhHhhheeecCcchhhHHHHH-HHHHHHHHHHHHHHHHHHHh--hHHHHHHHHHHHHHHHHHH
Confidence            32222111 1112222 33577899999998 77788889999999999987  7998888877776655544

>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1

Probab=98.05  E-value=0.00028  Score=65.37  Aligned_cols=243  Identities=13%  Similarity=0.077  Sum_probs=129.0

Q ss_pred             CCcchhHHHHHHHhhhhhHHHHhhhhHHHHhhhcCCcchhHhhhhHHHHHHH---HHHhhc-ccCCC--CCCCCCHHHHH
Q 021674           21 PVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFT---VWLSKA-HSSPA--EDPQLRPAEKK   94 (309)
Q Consensus        21 p~~~rg~~~g~~~~~~~~g~~lg~~l~~~l~~~~gWr~~F~i~~~~~~v~~~---~~~~~~-~~~p~--~~~~~~~~~~~   94 (309)
                      +++++.+.++.+--.=.+-.+++|.+.|.+....|.+....+.+...++...   .++.+. +..|+  ++++.++++..
T Consensus       143 ~~~~La~~NA~mRRIDL~ckllaPl~vG~l~t~~s~~~~~~~i~~~N~~S~~vEy~~l~~VY~~~P~L~~~~~~~~~~~~  222 (432)
T PF06963_consen  143 DPGALARMNATMRRIDLFCKLLAPLFVGLLMTFASPVIAAIFIAGWNLASVFVEYFLLARVYNSVPALAVKKRSSESESS  222 (432)
T ss_pred             ChhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHhcCCCCCcccccc
Confidence            3555666666666666688999999999999988888877776665554332   111111 22221  00000000000


Q ss_pred             HHHh--ccCCCCC-----------CCCCChhHhhcchHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhCCCccchhhHhh
Q 021674           95 LIVS--SCASKEP-----------VKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCV  161 (309)
Q Consensus        95 ~~~~--~~~~~~~-----------~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~wlp~~l~~~~g~s~~~~g~~~~  161 (309)
                      ...+  +..++++           ....+|+..+|+|.+.......++.. ...++-.-+..|+.+. |+|+...|.+-.
T Consensus       223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~Y~~q~vflas~alalLY~-TVLsf~~lmt~yl~~~-G~s~~~igi~R~  300 (432)
T PF06963_consen  223 SDEESSSESSSDPSILKRLWNPLRTIIRGWRTYFRQPVFLASFALALLYF-TVLSFGGLMTAYLKSQ-GYSPSVIGIFRG  300 (432)
T ss_pred             ccccccccccchhhHHHHHHHHHHHHhccHHHHHhCHHHHHHHHHHHHHH-HHhcCcHHHHHHHHHC-CCCHHHHHHHHH
Confidence            0000  0000000           00234666777776655444444332 2445566777899865 999999999999


Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHhhHHHHHHHHHhhccCch--HHHHHHHHHH-----Hhhhhhhh
Q 021674          162 LPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSP--AMAVLCMACS-----QGTDAFSQ  234 (309)
Q Consensus       162 ~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~-----~~~~~~~~  234 (309)
                      ...+.+..++.+..++.+|+|..+.-.+  ....... +  .......+....++  ......+..+     .|...+-.
T Consensus       301 ~gav~Gl~gT~~~p~l~~riGlvr~G~~--~l~~q~~-~--L~~~v~~~~~~~~~~~~~s~~~l~~gi~~SR~GLW~fDL  375 (432)
T PF06963_consen  301 LGAVFGLLGTWVYPWLMKRIGLVRAGLW--SLWWQWV-C--LALCVVSFWAPGSPFSSISAYLLLGGIALSRIGLWSFDL  375 (432)
T ss_pred             HHHHHHHHHHHHHHHHHHHhcchhhHHH--HHHHHHH-H--HHHHHHHHhcCCCCchhhHHHHHHHHHHHHHHHHHhhhH
Confidence            9999999999999999999985431111  1111111 1  11222222232322  2222222222     12212211


Q ss_pred             cchhhhhhccCCCchHHHHHHHhHhHhhhhhHHHhH
Q 021674          235 SGLYSNHQDIAPRYSGVLLGLSNTAGVLAGVFGTAA  270 (309)
Q Consensus       235 ~~~~~~~~~~~~~~~g~a~~~~~~~~~lgg~i~~~~  270 (309)
                      ...+...++.++++||+..|+-+...++.-.+.-.+
T Consensus       376 ~~~qi~Qe~V~~~~Rg~v~gvq~sl~~lf~ll~~~~  411 (432)
T PF06963_consen  376 AVTQIMQENVPESERGAVSGVQNSLQSLFELLSFVL  411 (432)
T ss_pred             HHHHhhcccCCHHHhhHHHHHHHHHHHHHHHHHHHH
Confidence            111111233555789999999888887766544433

It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane

>PRK09848 glucuronide transporter; Provisional

Probab=98.03  E-value=0.00013  Score=68.38  Aligned_cols=54  Identities=19%  Similarity=0.341  Sum_probs=46.5

Q ss_pred             HHHHHHHHHHhHHHHHHHHhCCCccchhhHhhhhHHHHHHHHHHHHHHHHHHHH
Q 021674          130 HNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVS  183 (309)
Q Consensus       130 ~~~~~~~~~~wlp~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~G~l~dr~~~  183 (309)
                      .+........+++.|+++..|+++.++|.+..+..+...+..++.|+++||.++
T Consensus        20 ~~~~~~~~~~~l~~y~~~~~gl~~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~~~   73 (448)
T PRK09848         20 NNFAFAMGALFLLSYYTDVAGVGAAAAGTMLLLVRVFDAFADVFAGRVVDSVNT   73 (448)
T ss_pred             hHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhhhheeeeecCCC
Confidence            344445566778889999999999999999999999999999999999999854

>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]

Probab=97.97  E-value=0.0001  Score=70.05  Aligned_cols=165  Identities=13%  Similarity=0.084  Sum_probs=100.3

Q ss_pred             HHHHHHHHHHHHHHHHHHH---hHHHHHHHHhCCCccchhhHhhhhHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHH
Q 021674          121 WALIVSHFCHNWGTFILLT---WMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQS  197 (309)
Q Consensus       121 ~~~~~~~~~~~~~~~~~~~---wlp~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~  197 (309)
                      |...+..|..+...+++..   -+=..+++.++-+..+++++.++........+++.+.+.||+|.|..         ..
T Consensus        45 WvV~~a~fl~~~~~~g~~~~~Gv~~~~~~~~f~~s~~~~~~i~sl~~~~~~~~gpl~s~l~~rfg~R~v---------~i  115 (509)
T KOG2504|consen   45 WVVVFASFLVNLSTDGLINSFGLLFEELMDYFGSSSSQIAWIGSLLLGVYLLAGPLVSALCNRFGCRTV---------MI  115 (509)
T ss_pred             eeeeHhHHHHHHhhhcchheehhhHHHHHHHhCCCccHHHHHHHHHHHHHHHhccHHHHHHhhcCchHH---------HH
Confidence            4444555555444444331   12234567788888889999988888888999999999999997631         11


Q ss_pred             HhhHHHHHHHHHhhccCchHHHHHHHHH--HHhhhhhhhcchhhhhhccCCCchHHHHHHHhHhHhhhhhHHHhHHHhhc
Q 021674          198 IGFLGPAFFLTQLSHVDSPAMAVLCMAC--SQGTDAFSQSGLYSNHQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYIL  275 (309)
Q Consensus       198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~g~a~~~~~~~~~lgg~i~~~~~g~l~  275 (309)
                      ++.++....+.......+.+..++....  +.|.+....+.+ ......-.+.|+.|.|+...+.-+|.++-|.+.-+++
T Consensus       116 ~G~~v~~~g~~lssF~~~i~~l~lt~gvi~G~G~~~~~~pai-viv~~YF~kkR~lA~Gia~~GsG~G~~~~~~l~~~l~  194 (509)
T KOG2504|consen  116 AGGLVAALGLLLSSFATSLWQLYLTFGVIGGLGLGLIYLPAV-VILGTYFEKKRALATGIAVSGTGVGTVVFPPLLKYLL  194 (509)
T ss_pred             HHHHHHHHHHHHHHHHhhHHHHHHHHHHHhhccchhhhcchh-hhhhhHhHHHHHHHHhhhhccCCcceeeHHHHHHHHH
Confidence            2222111111111222333333332222  222221111211 1122334578999999999999999999999999999


Q ss_pred             ccCCchHHHHHHHHHHHHHH
Q 021674          276 QHGSWDDVFKVSVGLYLVGT  295 (309)
Q Consensus       276 ~~~~~~~~~~~~~~~~~~~~  295 (309)
                      +..+|+..++....+.+-++
T Consensus       195 ~~~G~r~~~l~~~~~~l~~~  214 (509)
T KOG2504|consen  195 SKYGWRGALLIFGGISLNVL  214 (509)
T ss_pred             HHhCcHHHHHHHHHHHHHHH
Confidence            99899988877666665444

>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]

Probab=97.92  E-value=5.7e-05  Score=67.55  Aligned_cols=130  Identities=18%  Similarity=0.167  Sum_probs=79.9

Q ss_pred             HHHHHhHHHHHHHHh----CCCccchhhHhhhhHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHhhHHHHHHHHHh
Q 021674          135 FILLTWMPTYYNQVL----HFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQL  210 (309)
Q Consensus       135 ~~~~~wlp~~l~~~~----g~s~~~~g~~~~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~  210 (309)
                      |.+..|+---+++.+    +-+..-+|++-+.+.+...+.++..|.++||+|||.         .+.++.++.++.....
T Consensus        45 ~~~~~~~V~~F~~a~~~~~~~~~~yaGflGSsF~ilQ~~sS~~~G~~SD~yGRkp---------vll~c~~~va~s~ll~  115 (451)
T KOG2615|consen   45 YPFVVFMVRDFNIAIGEPDGASVFYAGFLGSSFSILQFISSPLWGCLSDRYGRKP---------VLLACLIGVALSYLLW  115 (451)
T ss_pred             hHHHHHhhHHHHHhhCCcccccchhhhhHhhHHHHHHHHhhhhhhhhhhhhCchH---------HHHHHHHHHHHHHHHH
Confidence            334444444444433    445567888888889999999999999999999873         2233333444444333


Q ss_pred             hccCchHHHHHHHHHHHhhhhhh--hcchhhhhhcc-CCCchHHHHHHHhHhHhhhhhHHHhHHHhhcc
Q 021674          211 SHVDSPAMAVLCMACSQGTDAFS--QSGLYSNHQDI-APRYSGVLLGLSNTAGVLAGVFGTAATGYILQ  276 (309)
Q Consensus       211 ~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~-~~~~~g~a~~~~~~~~~lgg~i~~~~~g~l~~  276 (309)
                      ...++. .++..  .-+..+.+.  .+..-+...|. ++++++.+++.+++...+|-++||.++|++.+
T Consensus       116 ~~S~~F-~afv~--aR~l~Gi~kgnl~v~rAiisdV~sek~r~l~ms~v~~a~~lGfilGPmIGgyla~  181 (451)
T KOG2615|consen  116 ALSRNF-AAFVL--ARFLGGIFKGNLSVIRAIISDVVSEKYRPLGMSLVGTAFGLGFILGPMIGGYLAQ  181 (451)
T ss_pred             HHHHHH-HHHHH--HHHhhhhccCchHHHHHHHHhhcChhhccceeeeeehhhhcchhhcchhhhHHHh
Confidence            332222 11111  011111121  11122233454 45789999999999999999999999999987

>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors)

Probab=97.89  E-value=0.00038  Score=68.06  Aligned_cols=164  Identities=15%  Similarity=0.113  Sum_probs=95.9

Q ss_pred             HHHHHHHhHHHHHHHHhCCCccchhhHhhhhHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHhhH-HHHHHHHHhh
Q 021674          133 GTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFL-GPAFFLTQLS  211 (309)
Q Consensus       133 ~~~~~~~wlp~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~~  211 (309)
                      .+|++.+-+-.|+++.+|++..++..+........-+...++|+++|++-.|.       +.+.....+ .....+..+.
T Consensus         2 syYGm~aiLvlYl~~~lg~~~~~A~~i~~~f~~l~yl~pilGg~iAD~~lG~~-------~tIl~~~ii~~lG~~llai~   74 (654)
T TIGR00926         2 SYYGMRTILVLYFLNFLGFSESTSTVLFHTFTYLCYLTPLIGAIIADGWLGKF-------KTILYLSIVYVVGHALLSFG   74 (654)
T ss_pred             ceeecHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhH-------HHHHHHHHHHHHHHHHHHhc
Confidence            46778888889999999999888888777776677788899999999976542       111111111 1111111111


Q ss_pred             cc-C---chHH--HHH-HHHHHHhhhhh--hhcchhhhh-hccCCCchHHHHHHHhHhHhhhhhHHHhHHHhhccc----
Q 021674          212 HV-D---SPAM--AVL-CMACSQGTDAF--SQSGLYSNH-QDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQH----  277 (309)
Q Consensus       212 ~~-~---~~~~--~~~-~~~~~~~~~~~--~~~~~~~~~-~~~~~~~~g~a~~~~~~~~~lgg~i~~~~~g~l~~~----  277 (309)
                      .. .   ....  ..+ +...+.|.+.+  ..++..... .+..++.+-....+.....++|+.+++.+.+++-+.    
T Consensus        75 a~~~~~~~~~~~~~l~gLaLia~G~GgiKp~vsaf~gdqf~~~~~~~~~s~F~~fY~~iNiGSlis~~i~~~l~~~~~~f  154 (654)
T TIGR00926        75 AIPSSGHPLHDLLDLLGLALIALGTGGIKPCVSAFGGDQFEERQLSLRSRFFSFFYFAINAGSLISTIITPILRGDVGCF  154 (654)
T ss_pred             cCcccccchHHHHHHHHHHHHHhhccccccCchhhhHhhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccc
Confidence            11 0   1111  111 11112222211  111111111 111123467778888889999999999999988643    


Q ss_pred             ---CCchHHHHHHHHHHHHHHHHHHhhcC
Q 021674          278 ---GSWDDVFKVSVGLYLVGTAVWNLFST  303 (309)
Q Consensus       278 ---~~~~~~~~~~~~~~~~~~~~~~~~~~  303 (309)
                         .+|..+|.+.+++.+++.+++....+
T Consensus       155 g~~~~~~~aF~i~~i~m~ia~lvf~~g~k  183 (654)
T TIGR00926       155 GCQDCYPLAFGVPAILMILALIVFMAGSK  183 (654)
T ss_pred             ccCcchHHHHHHHHHHHHHHHHHHHHhcc
Confidence               25888999888888888877655443

>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]

Probab=97.83  E-value=0.00039  Score=64.62  Aligned_cols=176  Identities=15%  Similarity=0.136  Sum_probs=98.4

Q ss_pred             HHHHHHHHHHHHhHHHHHHHHhCCCccchhhHhhhhHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHhhHHHHHHH
Q 021674          128 FCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFL  207 (309)
Q Consensus       128 ~~~~~~~~~~~~wlp~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~~~~~~~~~~~  207 (309)
                      +..+...-....|++.|+.++.|+|+..+|.++.+.=+.-++.-++.|.++||..+|.    ..+|.++..+.+-.++..
T Consensus        22 ~~~~~~~~~~~~yLl~fYTdv~Gis~~~aG~iflv~RiiDAi~DP~~G~i~D~t~~r~----GrfRP~lL~g~ip~~i~~   97 (467)
T COG2211          22 FASNFAFGIVVLYLLFFYTDVFGLSAALAGTIFLVARIIDAITDPIMGFIVDRTRSRW----GRFRPWLLWGAIPFAIVA   97 (467)
T ss_pred             hHHHHHHHHHHHHHHHHHhcccCCcHHHHHHHHHHHHHHHHHhcchheeeeccccccc----ccccHHHHHHhHHHHHHH
Confidence            3444555567789999999999999999999999998999999999999999864321    113333333322222222


Q ss_pred             HHhhccC-----c-hHH-HHHHHHHHHhhhhhhhcc-hhhhhhccCCCchHHHHHHHhHhHhhhhhHHHhHHHhhccc--
Q 021674          208 TQLSHVD-----S-PAM-AVLCMACSQGTDAFSQSG-LYSNHQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQH--  277 (309)
Q Consensus       208 ~~~~~~~-----~-~~~-~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~g~a~~~~~~~~~lgg~i~~~~~g~l~~~--  277 (309)
                      .......     . ..+ .+..+....+....+.+- ....+...+|++|..-.+.-..+.++|+.+...+.+.+++.  
T Consensus        98 ~l~F~~p~~~~~~k~~ya~vtY~l~~l~YT~vniPy~al~~~iT~d~~ER~~l~s~R~~~~~~g~~l~~~~~~plv~~~g  177 (467)
T COG2211          98 VLLFITPDFSMTGKLIYALVTYMLLGLGYTLVNIPYGALGPEITQDPQERASLTSWRMVFASLGGLLVAVLFPPLVKLFG  177 (467)
T ss_pred             HHHHcCCCcccCcchHHHHHHHHHHHHHHHheeCchhhcchhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence            2222211     1 112 222222322222221110 11123335677888777777777777776666666555543  


Q ss_pred             -----CCchHHHHHHHHHHHHHHHHHHhhcCCcccc
Q 021674          278 -----GSWDDVFKVSVGLYLVGTAVWNLFSTGEKVV  308 (309)
Q Consensus       278 -----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  308 (309)
                           .+|.....+..++..+ ...+-++.+||+..
T Consensus       178 ~~~~~~g~~~~~~~~~vi~~i-~~l~~~~~v~ER~~  212 (467)
T COG2211         178 GGDKALGYQGTALVLGVIGVI-LLLFCFFNVKERVV  212 (467)
T ss_pred             CCcchhhHHHHHHHHHHHHHH-HHHHHHHHhhcccC
Confidence                 1344443333333332 33445556666653

>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]

Probab=97.82  E-value=0.0012  Score=61.86  Aligned_cols=154  Identities=15%  Similarity=0.196  Sum_probs=84.1

Q ss_pred             HhHHHHHHHHhCCCccch------hhHhhhhHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHhhHHHHHHHHHhhc
Q 021674          139 TWMPTYYNQVLHFNLTES------GLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSH  212 (309)
Q Consensus       139 ~wlp~~l~~~~g~s~~~~------g~~~~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~  212 (309)
                      .|.-.-+.+.+|.+..+.      +...+...+++.+|+.+.|+++||+|||+-.      .+.....++.+++......
T Consensus        39 ~f~n~t~~~r~g~~~s~~~~~~lwS~~vs~f~iG~~~Gs~~~~~la~~~GRK~~l------~~~~~l~~~~~~~~~~s~~  112 (485)
T KOG0569|consen   39 SFINETLIERYGLPLSDSTLDLLWSLIVSIFFIGGMIGSFSSGLLADRFGRKNAL------LLSNLLAVLAALLMGLSKS  112 (485)
T ss_pred             HHHHHHHHHhcCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchHHH------HHHHHHHHHHHHHHHHHHH
Confidence            444445566677554442      4556667789999999999999999987311      1111111122222211112


Q ss_pred             cCchHHHHHH-HHHHHhhh-hhhhcchhhhhhccCC-CchHHHHHHHhHhHhhhhhHHHhHH-Hhhccc-CCchHHHHHH
Q 021674          213 VDSPAMAVLC-MACSQGTD-AFSQSGLYSNHQDIAP-RYSGVLLGLSNTAGVLAGVFGTAAT-GYILQH-GSWDDVFKVS  287 (309)
Q Consensus       213 ~~~~~~~~~~-~~~~~~~~-~~~~~~~~~~~~~~~~-~~~g~a~~~~~~~~~lgg~i~~~~~-g~l~~~-~~~~~~~~~~  287 (309)
                      .+...+.+.. +..+...+ .....++|  ..|..| +.||......+....+|-.++..++ -.++++ ..|...+.+.
T Consensus       113 ~~~~e~li~GR~i~Gl~~gl~~~~~pmy--l~E~sP~~~RG~~g~~~~~~~~~g~ll~~~~~l~~ilGt~~~W~~l~~~~  190 (485)
T KOG0569|consen  113 APSFEMLILGRLIVGLACGLSTGLVPMY--LTEISPKNLRGALGTLLQIGVVIGILLGQVLGLPSLLGTEDLWPYLLAFP  190 (485)
T ss_pred             hhhHHHHHHHHHHHHHHhHHHHHHHHHH--HhhcChhhhccHHHHHHHHHHHHHHHHHHHHccHHhcCCCcchHHHHHHH
Confidence            2233333222 11121111 11122233  346666 5799999988888888777775444 445555 4588777776


Q ss_pred             HHHHHHHHHHHHh
Q 021674          288 VGLYLVGTAVWNL  300 (309)
Q Consensus       288 ~~~~~~~~~~~~~  300 (309)
                      .+..++..+...+
T Consensus       191 ~i~~~~~l~~l~~  203 (485)
T KOG0569|consen  191 LIPALLQLALLPF  203 (485)
T ss_pred             HHHHHHHHHHHhc
Confidence            6665555544333

>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS)

Probab=97.80  E-value=0.00036  Score=59.43  Aligned_cols=97  Identities=13%  Similarity=0.128  Sum_probs=55.2

Q ss_pred             CcchhHHHHHHHhhhhhHHHHhhhh--HH-HHhh--hcCCcchhHhhhhHHHHHHHHHHhhcccCCCCCCCCC-HHHHHH
Q 021674           22 VAERSRSLALVYSGMYLGSVTGLAF--SP-FLIH--RFGWPSVFYSFGSLGTVWFTVWLSKAHSSPAEDPQLR-PAEKKL   95 (309)
Q Consensus        22 ~~~rg~~~g~~~~~~~~g~~lg~~l--~~-~l~~--~~gWr~~F~i~~~~~~v~~~~~~~~~~~~p~~~~~~~-~~~~~~   95 (309)
                      .|||++...+-..+.++|+++....  -. -..+  .-+||+++-+.+.+.++.++++.+..++  -|....+ ++|+  
T Consensus         1 ~k~K~~~s~~n~~gf~iG~ii~~ipF~~~~~~~~~~~~~W~~I~si~~lL~~IpLIly~ifGk~--fd~~~~~~k~~k--   76 (267)
T PF07672_consen    1 QKKKSILSQFNPWGFNIGTIIVNIPFLISSSVVIALTNNWQWILSIFILLIFIPLILYIIFGKN--FDIYSPKEKQEK--   76 (267)
T ss_pred             CCccceeeeeccccchhhHHHHHhhHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc--ccccCccccccc--
Confidence            3678888888888999999887543  11 1111  2359999998888777665555544322  1111111 1111  


Q ss_pred             HHhccCCCCCCCCCChhHhhcchHHHHHHHHH
Q 021674           96 IVSSCASKEPVKTIPWGLILSKPPVWALIVSH  127 (309)
Q Consensus        96 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~  127 (309)
                        ++. +.+  ++....+++|++..|...+.+
T Consensus        77 --~~~-~~~--~~~s~~~~LK~K~tw~w~~~Y  103 (267)
T PF07672_consen   77 --ENS-TLS--KKPSYKSILKEKETWKWILIY  103 (267)
T ss_pred             --ccc-ccc--ccchHHHHHccchHHHHHHHH
Confidence              000 111  124567899999998755444

>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins

Probab=97.52  E-value=0.0038  Score=53.61  Aligned_cols=134  Identities=13%  Similarity=0.142  Sum_probs=77.4

Q ss_pred             HHHHHHhHHHHHHHHhCCCccchhhHhhhhHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHhhHHHHHH---HHHh
Q 021674          134 TFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFF---LTQL  210 (309)
Q Consensus       134 ~~~~~~wlp~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~~~~~~~~~~---~~~~  210 (309)
                      .|.+..|-|. +++.+|+|.+|...+.....++..+ ++..|.+.||++.+..       .+...........   +...
T Consensus        18 ~Y~Fs~yS~~-Lk~~l~~sq~~l~~l~~~~~~G~~~-G~~~G~l~d~~gp~~~-------l~iG~~~~~~GY~~~~l~~~   88 (250)
T PF06813_consen   18 TYTFSAYSPQ-LKSRLGYSQSQLNTLSTAGDIGSYF-GILAGLLYDRFGPWVV-------LLIGAVLGFVGYGLLWLAVS   88 (250)
T ss_pred             ccchhhhhHH-HHHHhCCCHHHHHHHHHHHHHHhhc-cHHHHHHHHhcchHHH-------HHHHHHHHHHHHHHHHHHHh
Confidence            4666666665 4567899999999998888888876 4889999999986521       1111111111111   1111


Q ss_pred             hccC-chHHHHHHHHHHHhh-hhhhhcc-hhhhhhccCCCchHHHHHHHhHhHhhhhhHHHhHHHhhccc
Q 021674          211 SHVD-SPAMAVLCMACSQGT-DAFSQSG-LYSNHQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQH  277 (309)
Q Consensus       211 ~~~~-~~~~~~~~~~~~~~~-~~~~~~~-~~~~~~~~~~~~~g~a~~~~~~~~~lgg~i~~~~~g~l~~~  277 (309)
                      ...+ .+.+.+++.....+. ..+.++. +..+.+. -|+.||.+.|+.-...-+++++-..+.-.+.+.
T Consensus        89 ~~i~~~~~~~~~~~~~l~~~s~~~~~ta~lvt~~~N-FP~~RG~vvgilk~~~GLSaai~t~i~~~~f~~  157 (250)
T PF06813_consen   89 GRIPSLPVWLMCLFLFLGGNSSCWFNTASLVTCVRN-FPRSRGTVVGILKGFFGLSAAIFTQIYSAFFGD  157 (250)
T ss_pred             CccCccchHHHHHHHHHHcccHHHhhhHHHHHHHHh-CccccCceehhhhHHHHhHHHHHHHHHHHHcCC
Confidence            1122 233333222211111 1222222 2333344 467899999999988888888777777666555

>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]

Probab=97.49  E-value=0.0025  Score=59.58  Aligned_cols=46  Identities=17%  Similarity=0.281  Sum_probs=37.7

Q ss_pred             cchhhHHHHHhccCCCcchhHHHHHHHhhhhhHHHHhhhhHHHHhh
Q 021674            7 VAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIH   52 (309)
Q Consensus         7 ~~~p~~~~~i~~~~p~~~rg~~~g~~~~~~~~g~~lg~~l~~~l~~   52 (309)
                      +.....-+++++....++|.|+++..+.+..+|.++||.++..+..
T Consensus       145 ~n~a~lR~Y~a~~s~~~dR~rA~a~~~~~~vlg~ilGp~~q~~f~~  190 (488)
T KOG2325|consen  145 GNFAVLRAYIADASTVEDRPRAFAATSGGFVLGIILGPTIQLAFTP  190 (488)
T ss_pred             ccHHHHHHHHHhccCccchHHHHHHhhhHHHHHHHHhHHHHHHHhh
Confidence            3455566799999989999999999999989999999888766544

>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]

Probab=97.43  E-value=0.0032  Score=60.12  Aligned_cols=130  Identities=18%  Similarity=0.200  Sum_probs=75.2

Q ss_pred             hhhHhhhhHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHhhHHHHHHHHHhhccCchHHHHHH-HHHHHhhhhhh-
Q 021674          156 SGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSPAMAVLC-MACSQGTDAFS-  233 (309)
Q Consensus       156 ~g~~~~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~-  233 (309)
                      .+++.+...++..++.++.|+++|++|||+..      .+..+.+....+..   ....+..+.... ...+++.+... 
T Consensus        91 ~s~~~s~~~lga~~g~l~~g~l~d~~GRk~~l------~~~~~~~~iG~ii~---~~a~~~~~l~~GR~l~G~g~G~~~~  161 (513)
T KOG0254|consen   91 QGLLTSILNLGALVGSLLAGRLGDRIGRKKTL------LLAVVLFLIGAIII---ALAPSWYQLIVGRILTGLGVGGASV  161 (513)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHH------HHHHHHHHHHHHHH---HHhhhHHHHHHHHHHhccchhhhhh
Confidence            37888889999999999999999999987311      11111111111111   112233333322 22333333221 


Q ss_pred             hcchhhhhhccCC-CchHHHHHHHhHhHhhhhhHHHhHHHhhcccC--CchHHHHHHHHHHHHHHHH
Q 021674          234 QSGLYSNHQDIAP-RYSGVLLGLSNTAGVLAGVFGTAATGYILQHG--SWDDVFKVSVGLYLVGTAV  297 (309)
Q Consensus       234 ~~~~~~~~~~~~~-~~~g~a~~~~~~~~~lgg~i~~~~~g~l~~~~--~~~~~~~~~~~~~~~~~~~  297 (309)
                      ..+++  ..|..| +.||.-.+..+....+|..++ .+.+...++.  +|+..+.+..+..++-.+.
T Consensus       162 ~~piy--~sEiap~~~RG~l~~~~~l~~~~Gi~~~-~~~~~~~~~~~~~Wr~~~~~~~i~~~~~~~~  225 (513)
T KOG0254|consen  162 LAPVY--ISEIAPAHIRGTLVSLYQLFITIGILLG-YCINYGTSKVYAGWRIPLGLALIPAVILALG  225 (513)
T ss_pred             cchhh--HhhcCChhhhHHHHHHHHHHHHHHHHHH-HHHhhhhccCCccHHHHHHHHHHHHHHHHHH
Confidence            12233  345555 589999998888877665555 7777776653  7987776655555544444

>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX)

Probab=97.23  E-value=0.1  Score=47.98  Aligned_cols=173  Identities=11%  Similarity=0.083  Sum_probs=88.6

Q ss_pred             hhHHHHHhccCCCcchhHHHHHHHhhhhhHHHHhhhhHHHHhhhc--CCcchhHhhhhHHHHHHHHHHhhcccCCCC---
Q 021674           10 PAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRF--GWPSVFYSFGSLGTVWFTVWLSKAHSSPAE---   84 (309)
Q Consensus        10 p~~~~~i~~~~p~~~rg~~~g~~~~~~~~g~~lg~~l~~~l~~~~--gWr~~F~i~~~~~~v~~~~~~~~~~~~p~~---   84 (309)
                      .+-++++-...|+++--|+.+...+..-+|-.++..+|-.++..-  +.+..+++ .........++-...|..++.   
T Consensus       112 vay~sYiys~v~~~~yq~vts~~raa~l~g~~~s~~lgQllvs~~~~sy~~L~~i-sl~~~~~a~~~~~fLP~~~~S~~f  190 (412)
T PF01770_consen  112 VAYYSYIYSVVDKEHYQKVTSYTRAATLVGRFISSLLGQLLVSFGGVSYFQLNYI-SLASVSLALLIALFLPMPKRSLFF  190 (412)
T ss_pred             HHHHHHheeecCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHH-HHHHHHHHHHHHHHcCCCCcccce
Confidence            345678888899999999999999999999999999998776632  33333333 221111111221222221110   


Q ss_pred             CCCCC------HHHHHHH---Hhcc--CCCCCC-CCC-----------ChhHhhcchHHHHHHHHHHHHHHHHHHHHHhH
Q 021674           85 DPQLR------PAEKKLI---VSSC--ASKEPV-KTI-----------PWGLILSKPPVWALIVSHFCHNWGTFILLTWM  141 (309)
Q Consensus        85 ~~~~~------~~~~~~~---~~~~--~~~~~~-~~~-----------~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~wl  141 (309)
                      +++..      +.+.+..   .++.  .++++. .+.           ++++..+||.++.-.+=..+...+++-+.++.
T Consensus       191 ~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~y~~~~ll~WSlWWa~atcgy~qv~nYv  270 (412)
T PF01770_consen  191 HRKPPAEQDANESESDKMNESPESSSSTEKSPSTESSSRKSVLRLLWKDFKSCYSNPRLLLWSLWWAFATCGYYQVINYV  270 (412)
T ss_pred             eccCccccccccccccccccccccccccccCcccccchHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHhHHHHHHHHH
Confidence            00000      0000000   0000  000000 000           12334466664432222223334556666666


Q ss_pred             HHHHHHH--hCCCccchhhHhhhhHHHHHHHHHHHHHHHHHHHH
Q 021674          142 PTYYNQV--LHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVS  183 (309)
Q Consensus       142 p~~l~~~--~g~s~~~~g~~~~~~~~~~~ig~~~~G~l~dr~~~  183 (309)
                      -....+.  .+-+..--|..-....+.+.++.+..|++..++.+
T Consensus       271 Q~LW~~v~~~~~~~vYNG~VeA~~tllgA~~al~~g~v~~~w~~  314 (412)
T PF01770_consen  271 QSLWDTVPPSDNESVYNGAVEAASTLLGAIAALLAGYVKVNWDR  314 (412)
T ss_pred             HHHHHhcCCCCCCcccchHHHHHHHHHHHHHHHHHhHhhcchHH
Confidence            6666544  23333345777777777888888899998555543

Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane

>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins

Probab=97.19  E-value=0.0028  Score=59.15  Aligned_cols=152  Identities=21%  Similarity=0.199  Sum_probs=84.7

Q ss_pred             HHHHHHhCCCccchhhHhhhhHHHHHHHHHHHHHHHHHHH---HcCCChhhHHHHHHHHhhHHHH---HHHHHhhc-cCc
Q 021674          143 TYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLV---SKGLSVTTVRKIMQSIGFLGPA---FFLTQLSH-VDS  215 (309)
Q Consensus       143 ~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~G~l~dr~~---~r~~~~~~~~~~~~~~~~~~~~---~~~~~~~~-~~~  215 (309)
                      .|+++++|+++.+...+.....+-- ...++.|.++|-+-   .||       |..+.++.+...   ..+..... .++
T Consensus        14 ~~l~~~l~ls~~~~~~~~~~~~lPw-~~Kp~~g~lsD~~pi~G~rr-------~~Y~~i~~~~~~~~~~~~~~~~~~~~s   85 (433)
T PF03092_consen   14 PFLKDDLGLSPAQLQRLSSLASLPW-SIKPLYGLLSDSFPIFGYRR-------KPYMIIGWLLGAVSALVLALLPASESS   85 (433)
T ss_pred             HHHHHHcCCCHHHHHHHHHHHhCch-HHhhhHHhhcccccccCCcc-------hHHHHHHHHHHHHHHHHHHhcccccch
Confidence            4788999999999887776555433 45779999999973   232       111122222221   11111111 112


Q ss_pred             hHHHHHH-HHHHHhhhh--hhhcchhhhhhccCCCchHHHHHHHhHhHhhhhhHHHhHHHhhcccCCchHHHHHHHHHHH
Q 021674          216 PAMAVLC-MACSQGTDA--FSQSGLYSNHQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSWDDVFKVSVGLYL  292 (309)
Q Consensus       216 ~~~~~~~-~~~~~~~~~--~~~~~~~~~~~~~~~~~~g~a~~~~~~~~~lgg~i~~~~~g~l~~~~~~~~~~~~~~~~~~  292 (309)
                      ...+..+ +...++...  ...-+.+.......|+.+|.--+.....+.+|+.++..+.|.+.+..+++..|.+.+.+..
T Consensus        86 ~~~~~~~l~la~~g~a~~DV~aDa~vvE~~~~~p~~~g~lqS~~~~~~~~G~lv~~~l~G~l~~~~~~~~~f~i~~~~~~  165 (433)
T PF03092_consen   86 AAIAVVLLFLASFGYAFADVAADALVVELARREPESRGDLQSFVWGVRSVGSLVGSLLSGPLLDSFGPQGVFLISAALPL  165 (433)
T ss_pred             hhhHHHHHHHHHHHHHHHHHhhhHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHHHHhhhhhhhcCCCeEEehHHHHHHH
Confidence            2222222 111121110  0111222222223444477777777888899999999999999999778777877776666


Q ss_pred             HHHHHHHhhc
Q 021674          293 VGTAVWNLFS  302 (309)
Q Consensus       293 ~~~~~~~~~~  302 (309)
                      +..+...++.
T Consensus       166 l~~~~~~~~~  175 (433)
T PF03092_consen  166 LMLIVALFLL  175 (433)
T ss_pred             HHHHHHHHhh
Confidence            5554444443

Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).

>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]

Probab=97.15  E-value=0.022  Score=53.58  Aligned_cols=126  Identities=21%  Similarity=0.145  Sum_probs=77.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHhhHHHHHHHHHhhccCchHHHHHHHHHHHhhhhhhhcchhhhhhc
Q 021674          164 WLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSPAMAVLCMACSQGTDAFSQSGLYSNHQD  243 (309)
Q Consensus       164 ~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (309)
                      ++...+.++.-|.++||+|||...      .+.....+...+.....     .++....... .+......+..++...|
T Consensus        72 ~~~~~i~s~~iG~lSD~~grk~~L------~~~~~~~~l~~~~~~~~-----~~~~~~~~~l-~g~~~~~~s~~~a~vad  139 (463)
T KOG2816|consen   72 GLLTLISSPLIGALSDRYGRKVVL------LLPLFGTILPALCLLFQ-----GYWFFLLLGL-SGGFSAIFSVGFAYVAD  139 (463)
T ss_pred             HHHHHHHHhhhHHhhhhhhhhhhH------HHHHHHHHHhHHHHHHH-----HHHHhhhccc-ccchhhhhhhhhhheee
Confidence            567778888999999999987321      11122222222222111     1222221111 11111112233444444


Q ss_pred             cCC-CchHHHHHHHhHhHhhhhhHHHhHHHhhcccCCchHHHHHHHHHHHHHHHHHHhh
Q 021674          244 IAP-RYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSWDDVFKVSVGLYLVGTAVWNLF  301 (309)
Q Consensus       244 ~~~-~~~g~a~~~~~~~~~lgg~i~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~  301 (309)
                      ... +.|....|+.+.....+..++|.+.+.+....++..+|.+..+..++..+-..++
T Consensus       140 is~~~~R~~~~gll~~~~~~~~~~~p~~~~~~~~~~~~a~~f~ia~~~~~~~~~y~~~~  198 (463)
T KOG2816|consen  140 ISSEEERSSSIGLLSGTFGAGLVIGPALGGYLVKFLGIALVFLIAAASGILSLLYMLLF  198 (463)
T ss_pred             ccchhHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHhhc
Confidence            443 5799999999998889999999999999999889999988887777666554444

>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function

Probab=97.08  E-value=0.062  Score=48.24  Aligned_cols=38  Identities=18%  Similarity=0.218  Sum_probs=35.1

Q ss_pred             HHhCCCccchhhHhhhhHHHHHHHHHHHHHHHHHHHHc
Q 021674          147 QVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSK  184 (309)
Q Consensus       147 ~~~g~s~~~~g~~~~~~~~~~~ig~~~~G~l~dr~~~r  184 (309)
                      +.+|++..+.+.+.....+...+.+.+.|.++||+|||
T Consensus        62 ~~yg~~~~qIa~Lf~~Gf~Ss~i~g~~~G~laD~~Grk   99 (354)
T PF05631_consen   62 ESYGFSEHQIAILFVAGFASSAIFGTFVGSLADRYGRK   99 (354)
T ss_pred             HHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCch
Confidence            46899999999999999999999999999999999977

>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors)

Probab=97.08  E-value=0.11  Score=51.08  Aligned_cols=72  Identities=21%  Similarity=0.264  Sum_probs=57.8

Q ss_pred             CcccccchhhHHHHHhccCCCc---chhHHHHHHHhhhhhHHHHhhhhHHHHhhhc-------CCcchhHhhhhHHHHHH
Q 021674            2 GIGEGVAMPAMNNILSKWVPVA---ERSRSLALVYSGMYLGSVTGLAFSPFLIHRF-------GWPSVFYSFGSLGTVWF   71 (309)
Q Consensus         2 Gig~g~~~p~~~~~i~~~~p~~---~rg~~~g~~~~~~~~g~~lg~~l~~~l~~~~-------gWr~~F~i~~~~~~v~~   71 (309)
                      .+|.|+.-|+..+...|-++++   +|-+...++..+.++|+.++.++.+++.+..       +|...|.+.++..++.+
T Consensus        96 a~G~GgiKp~vsaf~gdqf~~~~~~~~~s~F~~fY~~iNiGSlis~~i~~~l~~~~~~fg~~~~~~~aF~i~~i~m~ia~  175 (654)
T TIGR00926        96 ALGTGGIKPCVSAFGGDQFEERQLSLRSRFFSFFYFAINAGSLISTIITPILRGDVGCFGCQDCYPLAFGVPAILMILAL  175 (654)
T ss_pred             HhhccccccCchhhhHhhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCcchHHHHHHHHHHHHHHH
Confidence            3688899999999999999754   3677888889999999999999999887443       69999998776665544


Q ss_pred             HH
Q 021674           72 TV   73 (309)
Q Consensus        72 ~~   73 (309)
                      ++
T Consensus       176 lv  177 (654)
T TIGR00926       176 IV  177 (654)
T ss_pred             HH
Confidence            33

>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions

Probab=97.08  E-value=0.057  Score=51.08  Aligned_cols=55  Identities=20%  Similarity=0.233  Sum_probs=34.9

Q ss_pred             HHHHHHHhHhHhhhhhHHHhHHHhhccc-CC-------chHHHHHHHHHHHHHHHHHHhhcCC
Q 021674          250 GVLLGLSNTAGVLAGVFGTAATGYILQH-GS-------WDDVFKVSVGLYLVGTAVWNLFSTG  304 (309)
Q Consensus       250 g~a~~~~~~~~~lgg~i~~~~~g~l~~~-~~-------~~~~~~~~~~~~~~~~~~~~~~~~~  304 (309)
                      +..++.-...+++|+.+.-.+.-.++.. ++       .+..+...+...++..+.+.++.++
T Consensus       187 ~~vS~~G~a~Gy~G~~v~l~i~l~~~~~~~~~~~~~~~~r~~~~~~a~ww~vfsiP~~~~~~~  249 (477)
T PF11700_consen  187 GRVSGLGWALGYIGGLVALLISLLLVISPGSTASNTWAIRVAFLIVALWWLVFSIPLFLWLPD  249 (477)
T ss_pred             chhHHHHHHHHHHHHHHHHHHHHHHHHcCCCccccchhhhHHHHHHHHHHHHHHHHHHHhCCC
Confidence            7778887888899887776654443222 21       3556776777766666665655433

Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.

>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]

Probab=97.04  E-value=0.0041  Score=58.83  Aligned_cols=152  Identities=14%  Similarity=0.132  Sum_probs=92.4

Q ss_pred             HHHhCCCccchhhHhhhhHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHhhHHHHHHHHHhhccCchHHHHHHHHH
Q 021674          146 NQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSPAMAVLCMAC  225 (309)
Q Consensus       146 ~~~~g~s~~~~g~~~~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  225 (309)
                      +++.++.-.+-+....++.++..++.+.+|++.||+.-+        +.+....+....+........+-+....+-+..
T Consensus        73 ~edl~~~~~~l~~~~t~F~v~Yii~~~p~~~L~~r~~ls--------~~l~~~~~~w~~~~~~~~~~~s~~~~ialr~ll  144 (495)
T KOG2533|consen   73 KEDLKLVGNQLGVLDTVFYVGYIIGQFPSGLLGDRFPLS--------KGLSVSGILWGLFGFLTAAVHSFPGLIALRFLL  144 (495)
T ss_pred             ccccchhhhhhhhHHHHHHHHHHHHHhhHHHHHHhCChH--------HHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHH
Confidence            355667677788888899999999999999999999622        223322222222222222211222232222222


Q ss_pred             HHhhhhhhhcchhhhhh-ccCCCchHHHHHHHhHhHhhhhhHHHhHHHhhcc------cCCchHHHHHHHHHHHHHHHHH
Q 021674          226 SQGTDAFSQSGLYSNHQ-DIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQ------HGSWDDVFKVSVGLYLVGTAVW  298 (309)
Q Consensus       226 ~~~~~~~~~~~~~~~~~-~~~~~~~g~a~~~~~~~~~lgg~i~~~~~g~l~~------~~~~~~~~~~~~~~~~~~~~~~  298 (309)
                      |..= ....+....... -..+++++.-.++.+....+|+++|..+...+.+      ..+|++.|++-+++.++..++.
T Consensus       145 Gl~e-s~~wP~~~~~lg~wy~~~e~g~r~~~~~a~~~~g~i~ggliA~g~~~~~~~~~~~gW~~~FiI~G~i~~~~gi~~  223 (495)
T KOG2533|consen  145 GLFE-SGGWPGVVAILGNWYGKSERGLRMGIWYASASLGNIFGGLIAYGVFKLNGSGGLAGWRWLFIIEGVITLVLGIVV  223 (495)
T ss_pred             HHHh-cccchHHHHHHHhhcChhhhhhhHHHHHHhcchhhHHHHHHHHHhhhhcCCCCcCCceeehhHHHHHHHHHHheE
Confidence            2211 111222222222 2356789999999999999999999888877543      2579999999887777666665


Q ss_pred             HhhcCCcc
Q 021674          299 NLFSTGEK  306 (309)
Q Consensus       299 ~~~~~~~~  306 (309)
                      .++..+++
T Consensus       224 f~~lp~~P  231 (495)
T KOG2533|consen  224 FFFLPDNP  231 (495)
T ss_pred             EEEecCCh
Confidence            55554544

>KOG3810 consensus Micronutrient transporters (folate transporter family) [Coenzyme transport and metabolism]

Probab=97.00  E-value=0.041  Score=49.12  Aligned_cols=279  Identities=11%  Similarity=0.105  Sum_probs=126.1

Q ss_pred             hHHHHHhccCCCcchhHHHHHHHhhhhhHHHHhhhhHHHHhhhcCCcchhHhh--hhHHHHHHHHHHhhcccCCCCCCCC
Q 021674           11 AMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSF--GSLGTVWFTVWLSKAHSSPAEDPQL   88 (309)
Q Consensus        11 ~~~~~i~~~~p~~~rg~~~g~~~~~~~~g~~lg~~l~~~l~~~~gWr~~F~i~--~~~~~v~~~~~~~~~~~~p~~~~~~   88 (309)
                      +-++++-+-+||+++-++.|.--+..-.|-..|..++-.++.. +|-.-+..+  ..-......++-...|. |+++--.
T Consensus       114 AYysYIYs~Vd~~~Yqrvt~y~RaA~L~g~~~g~vlaQlLvs~-~~~sy~~LN~ISL~~~~ia~~~A~fLP~-v~rSl~f  191 (433)
T KOG3810|consen  114 AYYSYIYSKVDPEMYKRVTGYCRAAFLVGKFVGSVLAQLLVSL-ETLSYTTLNYISLAEVTIAVLLALFLPR-VKRSLYF  191 (433)
T ss_pred             hhhheeeeecCHHHHHHHHHHhHHHHHHHhHHHhHHHHHHhhh-cccchhhhchhhHHHHHHHHHHHhhCCC-Cchhhhh
Confidence            4467778888999999999999999888888888888877664 333333221  11111111111112222 2211101


Q ss_pred             CHHHHHHHHhccCCCCCC-CCC------------ChhHhhcchHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHh-CCCcc
Q 021674           89 RPAEKKLIVSSCASKEPV-KTI------------PWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVL-HFNLT  154 (309)
Q Consensus        89 ~~~~~~~~~~~~~~~~~~-~~~------------~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~wlp~~l~~~~-g~s~~  154 (309)
                      +..+++...++.++..++ +..            ++++..|||++..=.+=..+...++|-+.++.-....+.. .-...
T Consensus       192 ~~~~~~~~v~~~e~~~~~~~~~~~l~~~~~~l~~~l~~~y~np~ll~WSlWwAl~scg~~QV~nY~Q~LW~~~~~~~~~v  271 (433)
T KOG3810|consen  192 HRLEDKISVGDLEEMNPQASYMSYLRGAFVLLWRDLQECYSNPRLLKWSLWWALASCGYYQVTNYTQILWKEVAPNPANV  271 (433)
T ss_pred             hcccccceeccchhcCccchhhHHHHHHHHHHHHHHHHHhcCchhhhhHHHHHHhhchhHHHHHHHHHHHHhhCCCchhh
Confidence            111111001110000010 000            1233456776432111112223456666666655555432 00111


Q ss_pred             chhhHhhhhHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHhhHHHHHHHHHhhccCchHHHHHHHHHHHhhhhhhh
Q 021674          155 ESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSPAMAVLCMACSQGTDAFSQ  234 (309)
Q Consensus       155 ~~g~~~~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (309)
                      --|-.-.+..+.+.++.+..|++.-++.|.+       ..++.++...-+.++..+..+.+.++........-..-.+..
T Consensus       272 yNG~veAv~tlLGa~~~~~~g~l~i~w~r~g-------~~ll~~~s~~~agllf~m~~t~~Iw~~Ya~yvlfr~~y~l~i  344 (433)
T KOG3810|consen  272 YNGAVEAVSTLLGAIAALAAGYLNINWNRWG-------DLLLAVGSAVQAGLLFIMAQTQHIWVCYAGYVLFRVIYQLTI  344 (433)
T ss_pred             hcCHHHHHHHHHHHHHHHHHHheeeccchhh-------HHHHHHHHHHhhhhhhhhhcccceehhhhhHHHHHhhHhhhh
Confidence            1244444445567777788888876654432       223333333333334434444444332222111100000101


Q ss_pred             c-chhhhhhccCCCchHHHHHHHhHhHhhhhhHHHhHHHhhcccCC-----------chHHHHHHHHHHHHHHHHHHhh
Q 021674          235 S-GLYSNHQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGS-----------WDDVFKVSVGLYLVGTAVWNLF  301 (309)
Q Consensus       235 ~-~~~~~~~~~~~~~~g~a~~~~~~~~~lgg~i~~~~~g~l~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~  301 (309)
                      + ..+....+.+.+.-|...|++.+..-   ++-..+.-.++|..+           |..-|.+.++++++........
T Consensus       345 tiA~~~iA~nL~~e~~gLvFGiNTFvAl---~lQsilT~iVvd~~g~~L~ir~Q~~~Y~~Yf~v~~~i~~~~~~~~~~~  420 (433)
T KOG3810|consen  345 TIATFQIARNLSSELFGLVFGINTFVAL---ILQSILTLIVVDDRGLGLDIRTQFVVYSSYFIVLGVIFLIGFGIEYLM  420 (433)
T ss_pred             hHHHHHHHHhhhhhhheeeeehHHHHHH---HHHHhheEEEEcccccCCCcceeEEEEeehHHHHHHHHHHHHHHHHHH
Confidence            1 01111223344556777776444432   233344444556322           4456788888888886554444

>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function

Probab=96.82  E-value=0.027  Score=50.54  Aligned_cols=145  Identities=16%  Similarity=0.171  Sum_probs=79.9

Q ss_pred             CCcchhHHHHHHH-hhhhhHHHHhhhhHHHHhhhcCC--cchhHhhhhHHHHHHHHHHhhcccCCCCCCCCCHHHHHHHH
Q 021674           21 PVAERSRSLALVY-SGMYLGSVTGLAFSPFLIHRFGW--PSVFYSFGSLGTVWFTVWLSKAHSSPAEDPQLRPAEKKLIV   97 (309)
Q Consensus        21 p~~~rg~~~g~~~-~~~~~g~~lg~~l~~~l~~~~gW--r~~F~i~~~~~~v~~~~~~~~~~~~p~~~~~~~~~~~~~~~   97 (309)
                      |++..+.-.+... .++++-++++..++-++++..|-  .++|....++.++..++.....+|...++.+.++..+..  
T Consensus       156 ~~~~L~~tF~~~tf~~n~~vAI~aGv~a~~l~~~~~~g~vaPF~~a~~~l~~~~~~I~~~W~ENyg~~~~~~~~~~~~--  233 (354)
T PF05631_consen  156 PQEWLSDTFSLATFFGNGVVAIGAGVVANVLADWFGFGPVAPFDAAIVLLAVAAVLILKTWPENYGDTSSSSSLSGSF--  233 (354)
T ss_pred             ChHHHHHHHHHHHHHHhHHHHHHHhHHHHHHHHHhCCCCcchHHHHHHHHHHHHHHHHhcccccCCCcccccchHHHH--
Confidence            4444444444333 34444556666777777887765  778876444444333332222333222211100000000  


Q ss_pred             hccCCCCCCCCCChhHhhcchHHHHHHHHHHHHHHHHHHHH-HhHHHHHHHHhCCCccchhhHhhhhHHHHHHHHHHHHH
Q 021674           98 SSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILL-TWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGW  176 (309)
Q Consensus        98 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~wlp~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~G~  176 (309)
                                ...++.+++||+.+.+-....+....+|.+. .|.|..-.+  + ...--|++.+-..++..+|+.+..+
T Consensus       234 ----------~~a~~~i~~d~ril~LG~~qslFE~smy~FVflWtPaL~~~--~-~~~P~GlIFssFM~a~MlGS~lf~~  300 (354)
T PF05631_consen  234 ----------REAWRAILSDPRILLLGLIQSLFEGSMYLFVFLWTPALDPD--D-EELPLGLIFSSFMVAMMLGSSLFSR  300 (354)
T ss_pred             ----------HHHHHHHHcCchhHHHHHHHHHHHHHHHHheeeeeceecCC--C-CCCCchHHHHHHHHHHHHHHHHHHH
Confidence                      1124567889999988888888888887776 667665521  2 1233677777666777777777665


Q ss_pred             HHHH
Q 021674          177 IADT  180 (309)
Q Consensus       177 l~dr  180 (309)
                      +..|
T Consensus       301 l~s~  304 (354)
T PF05631_consen  301 LLSK  304 (354)
T ss_pred             HHhC
Confidence            5543

>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon

Probab=96.80  E-value=0.019  Score=52.36  Aligned_cols=134  Identities=15%  Similarity=0.055  Sum_probs=76.4

Q ss_pred             HHHHHhCCCccchhhHhhhhHHHHHHHHHHHHHHHHHHH-----HcCCChhhHHHHHHHHhhHHHHHHHHHhhc-----c
Q 021674          144 YYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLV-----SKGLSVTTVRKIMQSIGFLGPAFFLTQLSH-----V  213 (309)
Q Consensus       144 ~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~G~l~dr~~-----~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~  213 (309)
                      .+..+++++..-.+.+.....+... ..+..|+.||+..     ||...++.. ......+..........+..     .
T Consensus         5 VMIvEL~vpA~lv~~lval~~~~ap-~R~~~G~~SD~~~s~~G~rRtPyI~~G-~~~~~~g~~~ap~a~~~l~~~~~~~~   82 (403)
T PF03209_consen    5 VMIVELGVPAWLVALLVALHYLVAP-LRVWFGHRSDTHPSILGWRRTPYIWGG-TLLQAGGLAIAPFALLLLAESGQQSS   82 (403)
T ss_pred             hHHHHhccHHHHHHHHHHHHHHHHH-HHHHhccccccCcccCcCCchhhhHHH-HHHHHHHHHHHHHHHHHHcccccccc
Confidence            3456788888888888877765544 6889999999988     665544432 11221211111111111111     0


Q ss_pred             CchHH--HHH---HHHHHHhhhhhhhcchhhhhhc-cCCCchHHHHHHHhHhHhhhhhHHHhHHHhhcccCCc
Q 021674          214 DSPAM--AVL---CMACSQGTDAFSQSGLYSNHQD-IAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSW  280 (309)
Q Consensus       214 ~~~~~--~~~---~~~~~~~~~~~~~~~~~~~~~~-~~~~~~g~a~~~~~~~~~lgg~i~~~~~g~l~~~~~~  280 (309)
                      .+.+.  ...   +...+.+... ..+...+...| .+|++|+.+.++.-..--+|.+++..+.|.++|..+.
T Consensus        83 ~~~~~g~~~a~l~F~l~G~G~~~-s~T~~lALl~D~~~e~~R~~~v~ivw~Mli~G~iv~ai~~g~lL~~~s~  154 (403)
T PF03209_consen   83 GPFWLGLALAALAFLLYGLGVHA-SGTSFLALLADLAPEERRPRVVAIVWVMLIVGIIVSAIVFGRLLDPFSP  154 (403)
T ss_pred             cccHHHHHHHHHHHHHHHhhHhH-hHHHHHHHHHhcCCHhhhhhhHHHHHHHHHHHHHHHHHHHHHHccccCH
Confidence            11221  111   1122222221 12223333334 4567899999999988888999999999999998543

It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.

>TIGR00769 AAA ADP/ATP carrier protein family

Probab=96.50  E-value=0.78  Score=43.32  Aligned_cols=165  Identities=13%  Similarity=0.102  Sum_probs=87.2

Q ss_pred             HHHHHhccCCCcchhHHHHHHHhhhhhHHHHhhhhHHHHhhh--------cCCc----chhHhhhhHHHHHHHHHHhhcc
Q 021674           12 MNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHR--------FGWP----SVFYSFGSLGTVWFTVWLSKAH   79 (309)
Q Consensus        12 ~~~~i~~~~p~~~rg~~~g~~~~~~~~g~~lg~~l~~~l~~~--------~gWr----~~F~i~~~~~~v~~~~~~~~~~   79 (309)
                      -+....|.++.+|-.|..++++.+.++|.++++.+..++.+.        -.|.    ..+.+.++.+.+.. ..++...
T Consensus       150 FW~fandi~t~~qakRfy~l~~~ganlg~i~sg~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~~~~~~-~~~~~l~  228 (472)
T TIGR00769       150 FWGFANQITTIDEAKRFYALFGLGANVALIFSGRTIKYFSKLRASLGPGVDGWHVSLKNLMVIVICSGLAII-LLYWWVN  228 (472)
T ss_pred             HHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccChHHHHHHHHHHHHHHHHHHHH-HHHHHHH
Confidence            356788999999999999999999999999999998888732        2352    23343333333322 2222221


Q ss_pred             cCCCCCCCCCHHHHHHHHhccCCCCCCC--CCChhHhhcchHHHHHHHHHHHHHHHHHHH-HHhHHHHHHHHhCCCccc-
Q 021674           80 SSPAEDPQLRPAEKKLIVSSCASKEPVK--TIPWGLILSKPPVWALIVSHFCHNWGTFIL-LTWMPTYYNQVLHFNLTE-  155 (309)
Q Consensus        80 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~-~~wlp~~l~~~~g~s~~~-  155 (309)
                      +....+|+...++++     +++++++.  ....+.++|+|.++.+.....+.+...--+ ..|- ..+.+.+ -++.+ 
T Consensus       229 ~~~~~~~~~~~~~~~-----~~k~k~k~~~~es~k~i~~S~yL~~ia~~vi~y~~~~nlve~~~k-~~v~~~~-p~~~~~  301 (472)
T TIGR00769       229 RNVLTDPRSYNPALK-----EKKVKPKMSTMESLKFLVSSPYILDLALLVIAYGISINLVEVTWK-SKLKAQY-PSPNEY  301 (472)
T ss_pred             hcccCCccccchhhc-----cccCCCCCCHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHC-CCHHHH
Confidence            111112221111110     01111110  113567889998887766655543332222 2333 2333322 23322 


Q ss_pred             ---hhhHhhhhHHHHHHHHHHHHHHHHHHHHc
Q 021674          156 ---SGLFCVLPWLTMAFSANLGGWIADTLVSK  184 (309)
Q Consensus       156 ---~g~~~~~~~~~~~ig~~~~G~l~dr~~~r  184 (309)
                         .|.+....++...+..++++++.+|+|.+
T Consensus       302 ~~f~g~~~~~~gi~tl~~~l~~~~l~~~~Gw~  333 (472)
T TIGR00769       302 SAFMGDFSTWTGVVSVTMMLLSGNVIRKYGWL  333 (472)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHH
Confidence               23333444455555566668888888754

These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.

>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]

Probab=96.25  E-value=0.01  Score=54.80  Aligned_cols=37  Identities=16%  Similarity=0.254  Sum_probs=31.1

Q ss_pred             CCccchhhHhhhhHHHHHHHHHHHHHHHHHHHHcCCC
Q 021674          151 FNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLS  187 (309)
Q Consensus       151 ~s~~~~g~~~~~~~~~~~ig~~~~G~l~dr~~~r~~~  187 (309)
                      ++....+.......++..+|.+++||+.||+|||+..
T Consensus        81 ~ps~i~~~Vn~~A~vGti~GQl~FG~lgD~~GRK~vY  117 (538)
T KOG0252|consen   81 YPSGVLALVNAAALVGTIFGQLFFGWLGDKFGRKKVY  117 (538)
T ss_pred             CCchHHHHHHHHHHHHHHHHHHHHHHHHhhhcchhhh
Confidence            4556678888888899999999999999999988643

>KOG3762 consensus Predicted transporter [General function prediction only]

Probab=96.15  E-value=0.29  Score=46.37  Aligned_cols=184  Identities=11%  Similarity=0.037  Sum_probs=92.0

Q ss_pred             HhhcchHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhCCCccchhhHhhhhHHHHHHHHHHHHHHHHHHHHcCCChhhHH
Q 021674          113 LILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVR  192 (309)
Q Consensus       113 ~l~~~~~~~~~~~~~~~~~~~~~~~~~wlp~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~  192 (309)
                      +++.++......+...+...+.-.+.+++==++++ ++-...--|....+-..+=...-++.+++..|.|+-+...    
T Consensus       366 ~~~~s~~~llff~~av~mG~g~~lv~tFLfWHled-~~~~~~LfGv~~a~~~~gEI~~~ffs~klI~kiGHv~v~~----  440 (618)
T KOG3762|consen  366 KVFASPHILLFFFVAVVMGAGVGLVFTFLFWHLED-LGGIKTLFGVVSALCHAGEILFYFFSFKLIEKIGHVNVMY----  440 (618)
T ss_pred             HHhcCCCEEehhHHHHHHHHHHHHHHHHHHHHHhh-cCCcceeeeehhhhhccchHHHHHHHHHHHHHhcccceee----
Confidence            45666655444444444444444455666344544 5655555554444444555666778899999998543211    


Q ss_pred             HHHHHHhhHHHHHHHHHhhccCchHHHHHHHHH-HHhhhhhhhcchhhhh-hccCCCchHHHHHHHhHhHh-hhhhHHHh
Q 021674          193 KIMQSIGFLGPAFFLTQLSHVDSPAMAVLCMAC-SQGTDAFSQSGLYSNH-QDIAPRYSGVLLGLSNTAGV-LAGVFGTA  269 (309)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~-~~~~~~~~g~a~~~~~~~~~-lgg~i~~~  269 (309)
                           .++.....=+......+++|+.+-.=.. +.....+ .....++. ...+|+.++++-++...... +|=.+|..
T Consensus       441 -----lgLa~~~~Rf~~~S~L~n~W~vLPieilqgit~ali-Waa~~sY~s~vaPp~l~at~Q~l~~g~f~GlG~g~Gsl  514 (618)
T KOG3762|consen  441 -----LGLACNVGRFLYYSYLQNPWMVLPIEILQGITHALI-WAAIISYASHVAPPGLRATAQGLLQGIFHGLGKGLGSL  514 (618)
T ss_pred             -----ehhhHHHHHHHHHHHhcCchheeeHHHHHHHHHHHH-HHHHHHHHHhhCCCcchHHHHHHHHHHhcccCcchhhh
Confidence                 1111111112222344556543221111 1111111 11111222 34577888888888776553 55578899


Q ss_pred             HHHhhcccCCchHHHHHHHHHHH---HHHHHHHhhcCCccc
Q 021674          270 ATGYILQHGSWDDVFKVSVGLYL---VGTAVWNLFSTGEKV  307 (309)
Q Consensus       270 ~~g~l~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~  307 (309)
                      ++|.+.+..+-+..|....+.++   +..+...+..+|+..
T Consensus       515 IGG~~v~~fg~~ttf~~~giAcl~~l~~~~~iq~~l~~~~~  555 (618)
T KOG3762|consen  515 IGGFVVERFGARTTFRIFGIACLVTLALFISIQLLLKRRGF  555 (618)
T ss_pred             hhhhhheeehhHHHHHHHHHHHHHHHHHHHHhhhhhccccc
Confidence            99998887655555544332222   333444444444443

>KOG3098 consensus Uncharacterized conserved protein [Function unknown]

Probab=95.97  E-value=0.61  Score=43.69  Aligned_cols=46  Identities=11%  Similarity=0.166  Sum_probs=40.4

Q ss_pred             CCcccccchhhHHHHHhccCCCcchhHHHHHHHhhhhhHHHHhhhh
Q 021674            1 MGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAF   46 (309)
Q Consensus         1 ~Gig~g~~~p~~~~~i~~~~p~~~rg~~~g~~~~~~~~g~~lg~~l   46 (309)
                      .|+|.+..+.+--.+++|+.+++++.+..++.=+....+.++|..+
T Consensus       112 lG~Gaallw~GqG~ylt~~st~~tie~Nisi~Wai~~~~li~Ggi~  157 (461)
T KOG3098|consen  112 LGFGAALLWTGQGGYLTSNSTRETIERNISIFWAIGQSSLIIGGII  157 (461)
T ss_pred             hhhhHHheecccceehhhcCChhhHHHHHHHHHHHHHHHHHhhhHh
Confidence            3889999999999999999999999999999888888888777654

>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1

Probab=95.95  E-value=0.95  Score=42.21  Aligned_cols=66  Identities=18%  Similarity=0.315  Sum_probs=49.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhCCCccchhhHhhhhHHHHHHHHHHHHHHHHHHHHc
Q 021674          119 PVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSK  184 (309)
Q Consensus       119 ~~~~~~~~~~~~~~~~~~~~~wlp~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~G~l~dr~~~r  184 (309)
                      ..+.+....++..++-=...+-.|.|+.+.+.-+..-.+.+-....+...+.++..|...||..|.
T Consensus         3 ~~~~Ly~sh~ls~w~dR~w~Fa~~L~L~~i~p~sLl~~siygl~~~~~~~~f~~~vG~~iD~~~Rl   68 (432)
T PF06963_consen    3 ALWRLYLSHFLSTWGDRMWEFAVPLFLISIFPGSLLPVSIYGLVRSLSAILFGPWVGRWIDRSPRL   68 (432)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHhhHHHHHHHhCCcch
Confidence            345677888888888777777889999988666655566666666677778888889999987654

It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane

>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters

Probab=95.93  E-value=0.00034  Score=65.33  Aligned_cols=128  Identities=15%  Similarity=0.150  Sum_probs=68.1

Q ss_pred             hhhHhhhhHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHhhHHHHHHHHHhhccC---chHHHHHH-HHHHHhhhh
Q 021674          156 SGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVD---SPAMAVLC-MACSQGTDA  231 (309)
Q Consensus       156 ~g~~~~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~-~~~~~~~~~  231 (309)
                      .++..+...++..+|++++|+++||+|||+.....      ........+.   ....+   +....... ...+++.+.
T Consensus        48 ~~~~~~~~~~g~~~G~~~~g~~~d~~GRk~~~~~~------~~~~~i~~~~---~~~~~~~~~~~~~~~~R~~~G~~~g~  118 (451)
T PF00083_consen   48 SSLLTSSFFIGAIVGALIFGFLADRYGRKPALIIS------ALLMIIGSIL---IAFAPSYNNFWMLLIGRFLIGFGIGG  118 (451)
T ss_pred             HHHHHHHHHhhhccccccccccccccccccccccc------cccccccccc---cccccccccccccccccccccccccc
Confidence            46777888899999999999999999988532211      0111111111   11111   22222221 222333221


Q ss_pred             -hhhcchhhhhhcc-CCCchHHHHHHHhHhHhhhhhHHHhHHHhhccc---CCchHHHHHHHHHHHHH
Q 021674          232 -FSQSGLYSNHQDI-APRYSGVLLGLSNTAGVLAGVFGTAATGYILQH---GSWDDVFKVSVGLYLVG  294 (309)
Q Consensus       232 -~~~~~~~~~~~~~-~~~~~g~a~~~~~~~~~lgg~i~~~~~g~l~~~---~~~~~~~~~~~~~~~~~  294 (309)
                       ......+  ..|. +++.|+...++.+....+|..++..+.-.+.+.   .+|+..+.+.....++.
T Consensus       119 ~~~~~~~~--~~E~~~~~~R~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~Wr~~~~~~~~~~l~~  184 (451)
T PF00083_consen  119 AYVVSPIY--ISEIAPPKHRGFLSSLFQLFWALGILLASLIGYIVSYYSDNWGWRILLIFGAIPSLLV  184 (451)
T ss_pred             cccccccc--cccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence             1112222  2344 557888888888887777666665554333222   34877776655555433

Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane

>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters

Probab=95.91  E-value=0.056  Score=38.04  Aligned_cols=51  Identities=16%  Similarity=0.206  Sum_probs=42.4

Q ss_pred             HHHHHHHHHhHHHHHHHHhCCCccchhhHhhhhHHHHHHHHHHHHHHHHHHH
Q 021674          131 NWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLV  182 (309)
Q Consensus       131 ~~~~~~~~~wlp~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~G~l~dr~~  182 (309)
                      ..+.+.+..-+|...+ +.++|..+++.+.+...++-.+|.+...++.++..
T Consensus         5 GigRFayTplLP~M~~-~~~ls~~~ag~lasaNy~GYL~GAl~~~~~~~~~~   55 (85)
T PF06779_consen    5 GIGRFAYTPLLPLMQA-DGGLSLSQAGWLASANYLGYLVGALLASRLPRHSR   55 (85)
T ss_pred             hhHHHHHHhHhHHHHH-hcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence            3566777777776664 57999999999999999999999999998888744

Note that many members are hypothetical proteins.

>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]

Probab=95.90  E-value=0.095  Score=49.23  Aligned_cols=41  Identities=20%  Similarity=0.042  Sum_probs=33.6

Q ss_pred             HHHHH-HhCCCccchhhHhhhhHHHHHHHHHHHHHHHHHHHH
Q 021674          143 TYYNQ-VLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVS  183 (309)
Q Consensus       143 ~~l~~-~~g~s~~~~g~~~~~~~~~~~ig~~~~G~l~dr~~~  183 (309)
                      +|+++ +++-+...-|+......++..++++.+|+.+.|.++
T Consensus        59 pYl~~lD~~A~~~ffG~viaa~slg~~i~~liF~~Ws~k~~~  100 (488)
T KOG2325|consen   59 PYLQKLDPTATATFFGLVIAASSLGHAIFSLIFGIWSNKTGS  100 (488)
T ss_pred             hhhhhcCCCCCcchhhHHHHHHHHHHHhcchhhcccccccCC
Confidence            56654 356666778999999999999999999999999873

>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age

Probab=95.90  E-value=0.25  Score=45.48  Aligned_cols=50  Identities=16%  Similarity=0.167  Sum_probs=36.4

Q ss_pred             hccCCCcchhHHHHHHHhhhhhHHHHhhhhHHHHhhhcCC--cchhHhhhhHHHHHH
Q 021674           17 SKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGW--PSVFYSFGSLGTVWF   71 (309)
Q Consensus        17 ~~~~p~~~rg~~~g~~~~~~~~g~~lg~~l~~~l~~~~gW--r~~F~i~~~~~~v~~   71 (309)
                      +..+|+    ..++-|++|-+.|+++|+..=..+.+ .|+  |..+.+..++.++..
T Consensus       137 t~~y~~----~~l~~wssGTG~aGl~Ga~~y~~lT~-~g~s~~~tll~~~~lp~~~~  188 (402)
T PF02487_consen  137 THFYGK----SSLSAWSSGTGGAGLVGALYYLGLTT-LGLSPRTTLLIMLVLPAIFL  188 (402)
T ss_pred             HHhcCc----cccccccCCcChhhHHHHHHHHHHHH-hCcCHHHHHHHHHHHHHHHH
Confidence            456664    36899999999999999887666666 777  667777666665543

The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane

>PRK03612 spermidine synthase; Provisional

Probab=95.81  E-value=1  Score=43.18  Aligned_cols=53  Identities=15%  Similarity=0.099  Sum_probs=36.1

Q ss_pred             HHHHHHHHHHHHhHHHHHHHHhCCCccchhhHhhhhHHHHHHHHHHHHHHHHH
Q 021674          128 FCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADT  180 (309)
Q Consensus       128 ~~~~~~~~~~~~wlp~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~G~l~dr  180 (309)
                      ++.......+-.-.-..+....|-+....+.+.+.+.+++.+|+.+++++.++
T Consensus        24 f~sg~~~L~yEv~~~r~l~~~~G~s~~~~~~ii~~fl~glalGs~l~~~~~~~   76 (521)
T PRK03612         24 FVCAACGLVYELLLGTLASYLLGDSVTQFSTVIGLMLFAMGVGALLSKYLLRD   76 (521)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHhhhhh
Confidence            33333333444444456666678888888888888888888888888877644

>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions

Probab=95.70  E-value=2  Score=40.84  Aligned_cols=165  Identities=15%  Similarity=0.170  Sum_probs=85.9

Q ss_pred             HHHHhccCCCcchhHHHHHHHhhhhhHHHHhhhhHHHHhh---------hcCCcchhHh----hhhHHHHHHHHHHhhcc
Q 021674           13 NNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIH---------RFGWPSVFYS----FGSLGTVWFTVWLSKAH   79 (309)
Q Consensus        13 ~~~i~~~~p~~~rg~~~g~~~~~~~~g~~lg~~l~~~l~~---------~~gWr~~F~i----~~~~~~v~~~~~~~~~~   79 (309)
                      +....|.++.+|-.|..++++.+.++|.+++..+..++.+         .-.|...+..    ....+.+.. ..++...
T Consensus       166 W~fAN~itt~~eAKRfYpl~g~ganigli~sG~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~v~~~g~~i~-~~~~~~~  244 (491)
T PF03219_consen  166 WGFANEITTVEEAKRFYPLFGLGANIGLIFSGQLTSYFSSFLRKSLPAGVDAWELSLNSLMGIVLILGIVII-LLYRYMN  244 (491)
T ss_pred             HHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccccccHhHHHHHHHHHHHHHHHHHH-HHHHHHH
Confidence            5677889999999999999999999999999999888877         2246654432    222222221 2222221


Q ss_pred             cCCCCCCCCCHHHHHHHHhccCCCCCC-CCCChhHhhcchHHHHHHHHHHHHHHHHHHHH-HhHHHHHHHHhCCCccc--
Q 021674           80 SSPAEDPQLRPAEKKLIVSSCASKEPV-KTIPWGLILSKPPVWALIVSHFCHNWGTFILL-TWMPTYYNQVLHFNLTE--  155 (309)
Q Consensus        80 ~~p~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~wlp~~l~~~~g~s~~~--  155 (309)
                      +...++++..++++    ++++++++. -....+.++|+|.+..++....+.+...--+- .|- ..+++.+ -++.+  
T Consensus       245 ~~vl~~~~~~~~~~----~~kk~k~k~s~~es~k~l~kS~yL~~Ia~lvi~Ygi~inLvE~~wK-~~lk~~~-~~~~~ys  318 (491)
T PF03219_consen  245 KNVLTDPRFYPSAK----KKKKKKPKMSLKESFKLLLKSKYLLCIALLVIAYGISINLVEVVWK-SQLKQLY-PDPNDYS  318 (491)
T ss_pred             HHccCccccchhhh----cccccCCCccHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHC-CCchHHH
Confidence            11111111111110    000011100 01134667889988876665554433322222 222 2233222 23332  


Q ss_pred             --hhhHhhhhHHHHHHHHHHHHHHHHHHHHc
Q 021674          156 --SGLFCVLPWLTMAFSANLGGWIADTLVSK  184 (309)
Q Consensus       156 --~g~~~~~~~~~~~ig~~~~G~l~dr~~~r  184 (309)
                        .|-.....++...+-.++++.+.+|+|.+
T Consensus       319 afmG~~~~~tGivtii~~~l~~~iir~~GW~  349 (491)
T PF03219_consen  319 AFMGKFSSWTGIVTIIMMFLSSNIIRRFGWR  349 (491)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHhhHH
Confidence              23334445555666667778888777754

One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane

>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]

Probab=95.65  E-value=0.3  Score=44.31  Aligned_cols=49  Identities=22%  Similarity=0.224  Sum_probs=40.8

Q ss_pred             HHHhHHHHHHHHhCCCccchhhHhhhhHHHHHHHHHHHHHHHHHHHHcC
Q 021674          137 LLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKG  185 (309)
Q Consensus       137 ~~~wlp~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~G~l~dr~~~r~  185 (309)
                      +...+-+-+++.-|.+..+..++......++.+++..-|.++||+|||+
T Consensus        96 ~~s~i~~~l~~~w~~s~~q~~llt~~v~~gmllga~~w~l~~d~~grr~  144 (528)
T KOG0253|consen   96 LLSLILPALDEVWGPSEGQAPLLTLSVFLGMLVGAMVWGLSADTIGRRK  144 (528)
T ss_pred             HHHHHHHHHHhhhchhhhhhhHHHHHHHhhhhhhhhhhheehhhhhcch
Confidence            3344556677788888889999988888999999999999999999874

>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]

Probab=95.46  E-value=0.3  Score=45.19  Aligned_cols=128  Identities=15%  Similarity=0.079  Sum_probs=68.0

Q ss_pred             HHHHHHhCCCccchhhHhhhhHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHhhH-HHHHHHHHhhc-cCchHHHH
Q 021674          143 TYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFL-GPAFFLTQLSH-VDSPAMAV  220 (309)
Q Consensus       143 ~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~~~-~~~~~~~~  220 (309)
                      .|.++.+| |...+-+...+..+......+.+-|+.||+|-|...      .+-.+.-. +..+-+..... .++..+--
T Consensus        69 n~~~~~Yg-s~~~~~wlsmIym~v~vp~gf~~mw~ldk~GLR~a~------llgt~ln~iGa~Ir~iss~p~v~~~f~~~  141 (480)
T KOG2563|consen   69 NYVNSFYG-SSSAADWLSMIYMVVSVPFGFAAMWILDKFGLRTAL------LLGTVLNGIGAWIRLISSLPFVPPLFRRP  141 (480)
T ss_pred             HHHHHHhc-chHHHHHHHHHHHHHHHHHhhHHHHhhcccchHHHH------HHHHHHHHHHHHHhhhccCccccccchhh
Confidence            56666677 556666777777788888899999999999966311      11111111 11111111111 11211211


Q ss_pred             HHHHHHHhhhhhhhc---chhh--hhhccCCCchHHHHHHHhHhHhhhhhHHHhHHHhhcccC
Q 021674          221 LCMACSQGTDAFSQS---GLYS--NHQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQHG  278 (309)
Q Consensus       221 ~~~~~~~~~~~~~~~---~~~~--~~~~~~~~~~g~a~~~~~~~~~lgg~i~~~~~g~l~~~~  278 (309)
                      ++. .+-...+.++.   .+-+  ...=++|++|++|..+..+...+|.+++-.+-..++.+.
T Consensus       142 l~~-~Gq~iaa~Aq~Fim~lPskiA~~WF~~~qra~A~~~~v~~n~LGvavg~llppilV~~~  203 (480)
T KOG2563|consen  142 LTH-TGQSIAAAAQPFILGLPSKIAAVWFPPDQRAIATVLGVMGNPLGVAVGFLLPPILVPSS  203 (480)
T ss_pred             hhH-HhHHHHHHhhhHhhccccHHHHhhCCcchhhhhhhHHHhcchHHHHHHhhccceecCCC
Confidence            111 11111111111   1101  112257888999988877777888888877777776653

>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]

Probab=95.11  E-value=0.035  Score=47.54  Aligned_cols=69  Identities=30%  Similarity=0.586  Sum_probs=56.6

Q ss_pred             CCcccccchhhHHHHHhccCCC-cchhHHHHHHHh-hhhhHHHHhhhhHHHHhhh--cCCcchhHhhhhHHHH
Q 021674            1 MGIGEGVAMPAMNNILSKWVPV-AERSRSLALVYS-GMYLGSVTGLAFSPFLIHR--FGWPSVFYSFGSLGTV   69 (309)
Q Consensus         1 ~Gig~g~~~p~~~~~i~~~~p~-~~rg~~~g~~~~-~~~~g~~lg~~l~~~l~~~--~gWr~~F~i~~~~~~v   69 (309)
                      +|++.|...|....++.+++|+ ++|+...+.... ...+|.++++.+++.+.+.  .+||+.|.+.......
T Consensus       104 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  176 (338)
T COG0477         104 QGLGGGGLLPVASALLSEWFPEATERGLAVGLVTLGAGALGLALGPLLAGLLLGALLWGWRAAFLLAALLGLL  176 (338)
T ss_pred             HHhhhHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHH
Confidence            4788889999999999999998 789999999999 5888888888777776654  6899987775555543

>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters

Probab=94.97  E-value=0.031  Score=50.99  Aligned_cols=69  Identities=17%  Similarity=0.273  Sum_probs=58.6

Q ss_pred             CcccccchhhHHHHHhccCCCc---chhHHHHHHHhhhhhHHHHhhhhHHHHhhhcCCcchhHhhhhHHHHH
Q 021674            2 GIGEGVAMPAMNNILSKWVPVA---ERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVW   70 (309)
Q Consensus         2 Gig~g~~~p~~~~~i~~~~p~~---~rg~~~g~~~~~~~~g~~lg~~l~~~l~~~~gWr~~F~i~~~~~~v~   70 (309)
                      ++|.|+.=|+...+.+|-++++   +|.+...++..+.++|+.++..+.+++-++.||.+.|.+.++.-++.
T Consensus        44 a~G~G~~K~ni~~~~~dq~~~~~~~~~~~~F~~fY~~in~G~~~~~~~~~~i~~~~~~~~~f~i~~~~~~~~  115 (372)
T PF00854_consen   44 AVGTGGIKPNISPFGADQYDEDDDSRRDSFFNWFYWGINIGSLFSPTLVPYIQQNYGWFLGFGIPAIGMLLA  115 (372)
T ss_dssp             HHHHHCCHHHHHHHHHHCSSTTTTTHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCS-HHHHHHHHHHHHHHH
T ss_pred             HhccccccccHHHHHHHHhcccchhhhhhhHHHHHHHHhhhhHhhcccchhhccccchhhhhhHHHHHHHHH
Confidence            5788999999999999999765   56777888999999999999999999999999999999866654443

The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.

>COG2270 Permeases of the major facilitator superfamily [General function prediction only]

Probab=94.89  E-value=0.44  Score=43.82  Aligned_cols=163  Identities=19%  Similarity=0.126  Sum_probs=80.7

Q ss_pred             HHHhHHHHHHHHhCC---Cccch----hhHhhhhHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHhhHHHHHHHHH
Q 021674          137 LLTWMPTYYNQVLHF---NLTES----GLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQ  209 (309)
Q Consensus       137 ~~~wlp~~l~~~~g~---s~~~~----g~~~~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~~~~~~~~~~~~~  209 (309)
                      ..+..|.|+++..+-   ++.+.    +...++..+...+-+++-|.++|+.|+|++...    .+..+... ..+ ...
T Consensus        34 tt~ifply~~~~~~~~g~~~~~~~a~~gy~~aia~llia~LapiLG~iaD~~g~Rk~~~~----~f~~i~i~-~~~-~L~  107 (438)
T COG2270          34 TTFIFPLYFTSVAGAGGVDPASSTAYWGYASAIAGLLIALLAPILGTIADYPGPRKKFFG----FFTAIGII-STF-LLW  107 (438)
T ss_pred             eeehhHHHHHHHHhhcCCCCcchhhHHHHHHHHHHHHHHHHHHHhhhhhccCCCcchHHH----HHHHHHHH-HHH-HHH
Confidence            346778888866554   55543    444455566666777888999999998764321    11111111 111 111


Q ss_pred             hhccCchHHH-HHHHHHHHhhhhhhhcchhhhhhcc-CCCchHHHHHHHhHhHhhhhhHHHhHH--Hhhcc---------
Q 021674          210 LSHVDSPAMA-VLCMACSQGTDAFSQSGLYSNHQDI-APRYSGVLLGLSNTAGVLAGVFGTAAT--GYILQ---------  276 (309)
Q Consensus       210 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~a~~~~~~~~~lgg~i~~~~~--g~l~~---------  276 (309)
                      .....+.++. +++++.......+++....+...+. +++..+..+++.-..+++|+.+.-..+  +.+..         
T Consensus       108 ~i~~~s~~~~~l~~~il~~i~~~~s~Vfyds~L~~~~~k~~~~riS~lg~~~gylgs~i~li~~~~~~~~~~~~~~~~~l  187 (438)
T COG2270         108 FIPPGSYLLLLLLFLILASIGFEFSNVFYDSMLPRLTTKDNMGRISGLGWALGYLGSVILLIFVVLGFALGQQTGITIIL  187 (438)
T ss_pred             HhCCCchHHHHHHHHHHHHHhcchhheehhhHhhhhcCccccCcccccccccccccchHHHHHHHHHHhcccccceeEEe
Confidence            1122133332 2333222111111111111222222 233445555555666777775544332  11111         


Q ss_pred             -------cCCchHHHHHHHHHHHHHHHHHHhhcCCc
Q 021674          277 -------HGSWDDVFKVSVGLYLVGTAVWNLFSTGE  305 (309)
Q Consensus       277 -------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  305 (309)
                             ...-+.++.+.++..++-.+.+.+..++-
T Consensus       188 ~~l~~~~~~~~ri~~~l~A~W~li~~iPm~~~v~~~  223 (438)
T COG2270         188 LGLPPADGEDVRITGLLAALWWLLFALPMILNVHDA  223 (438)
T ss_pred             eccCccccccchhHHHHHHHHHHHHHhHHHhccccc
Confidence                   12345678888888888887777665543

>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]

Probab=94.44  E-value=2.7  Score=35.58  Aligned_cols=144  Identities=20%  Similarity=0.259  Sum_probs=70.8

Q ss_pred             HHHhHHHHHHHHhCCCc--cchhhHhhhhHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHh-hHHHHHHHHHhhcc
Q 021674          137 LLTWMPTYYNQVLHFNL--TESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIG-FLGPAFFLTQLSHV  213 (309)
Q Consensus       137 ~~~wlp~~l~~~~g~s~--~~~g~~~~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~  213 (309)
                      .....|.+..+ .+.+.  ...+.......+...++.+..|+++||.|||+.       ...... ......... ....
T Consensus        21 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~-------~~~~~~~~~~~~~~~~-~~~~   91 (338)
T COG0477          21 LSPALPLLLST-LSLSSGRLLYGLLLSAFFLGYAIGSLLAGPLGDRYGRRKV-------LIIGLLLFLLGTLLLA-LAPN   91 (338)
T ss_pred             HHHHHHHHHHH-cCCCchhHHHHHHHHHHHHHHHHHhhhhhhccccccchHH-------HHHHHHHHHHHHHHHH-hCcc
Confidence            33445555544 34444  467888888888888888999999999976521       111111 111111111 1111


Q ss_pred             CchHHHHHHHH-HHHhhhhhhhcchhhhhhccCC--CchHHHHHHHhH-hHhhhhhHHHhHHHhhccc--CCchHHHHHH
Q 021674          214 DSPAMAVLCMA-CSQGTDAFSQSGLYSNHQDIAP--RYSGVLLGLSNT-AGVLAGVFGTAATGYILQH--GSWDDVFKVS  287 (309)
Q Consensus       214 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~--~~~g~a~~~~~~-~~~lgg~i~~~~~g~l~~~--~~~~~~~~~~  287 (309)
                      ........... .+.+.+.. .+.......+..|  +.++...+.... ...++..++|.+.+.+.+.  .+|+..+...
T Consensus        92 ~~~~~~~~~~~~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  170 (338)
T COG0477          92 VGLALLLILRLLQGLGGGGL-LPVASALLSEWFPEATERGLAVGLVTLGAGALGLALGPLLAGLLLGALLWGWRAAFLLA  170 (338)
T ss_pred             chHHHHHHHHHHHHhhhHHH-HHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHH
Confidence            11222221111 12221111 1111122233344  367777777666 4666777777666666554  4576655444


Q ss_pred             HHH
Q 021674          288 VGL  290 (309)
Q Consensus       288 ~~~  290 (309)
                      ...
T Consensus       171 ~~~  173 (338)
T COG0477         171 ALL  173 (338)
T ss_pred             HHH
Confidence            433

>KOG3762 consensus Predicted transporter [General function prediction only]

Probab=94.41  E-value=0.04  Score=51.90  Aligned_cols=72  Identities=25%  Similarity=0.302  Sum_probs=62.9

Q ss_pred             CCcccccchhhHHHHHhccCCCcchhHHHHHHHhh-hhhHHHHhhhhHHHHhhhcCCcchhHhhhhHHHHHHH
Q 021674            1 MGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSG-MYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFT   72 (309)
Q Consensus         1 ~Gig~g~~~p~~~~~i~~~~p~~~rg~~~g~~~~~-~~~g~~lg~~l~~~l~~~~gWr~~F~i~~~~~~v~~~   72 (309)
                      ||+-.+..|.++.+++++..||+-|..+++++... ..+|--+|..+||.+.+.+|=|..|.+.++..+++++
T Consensus       469 qgit~aliWaa~~sY~s~vaPp~l~at~Q~l~~g~f~GlG~g~GslIGG~~v~~fg~~ttf~~~giAcl~~l~  541 (618)
T KOG3762|consen  469 QGITHALIWAAIISYASHVAPPGLRATAQGLLQGIFHGLGKGLGSLIGGFVVERFGARTTFRIFGIACLVTLA  541 (618)
T ss_pred             HHHHHHHHHHHHHHHHHhhCCCcchHHHHHHHHHHhcccCcchhhhhhhhhheeehhHHHHHHHHHHHHHHHH
Confidence            67888999999999999999999999999998765 4577888899999999999999999998877766543

>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]

Probab=94.25  E-value=0.25  Score=45.86  Aligned_cols=49  Identities=16%  Similarity=0.189  Sum_probs=38.6

Q ss_pred             hhHHHHHhccCCCcchhH-HHHHHHhhhhhHHHHhhhhHHHHhhhcCCcchhHh
Q 021674           10 PAMNNILSKWVPVAERSR-SLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYS   62 (309)
Q Consensus        10 p~~~~~i~~~~p~~~rg~-~~g~~~~~~~~g~~lg~~l~~~l~~~~gWr~~F~i   62 (309)
                      ..+-++++|....+++-+ ++++...-..+|+.+|..++.    +.|||-.|-.
T Consensus       161 gp~ra~L~Dl~~~d~~~~~Ans~f~~f~avGnvLGY~~g~----y~~~~~~~~F  210 (498)
T KOG0637|consen  161 GPCRALLADLARGDAKKTRANSVFSFFMAVGNVLGYALGS----YLGLYKIFPF  210 (498)
T ss_pred             hhHHHHHHHhccChhhhhccchhHHHHHHhcceeeeeccc----ccCceEEeeh
Confidence            345678899996666666 999999999999999998887    5678877643

>COG3202 ATP/ADP translocase [Energy production and conversion]

Probab=93.59  E-value=6.6  Score=37.04  Aligned_cols=39  Identities=13%  Similarity=0.154  Sum_probs=33.1

Q ss_pred             HHHhccCCCcchhHHHHHHHhhhhhHHHHhhhhHHHHhh
Q 021674           14 NILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIH   52 (309)
Q Consensus        14 ~~i~~~~p~~~rg~~~g~~~~~~~~g~~lg~~l~~~l~~   52 (309)
                      ....|..+.+|-.|..++++.+.+++..++..+..++.+
T Consensus       171 ~faNeitt~~eakRFy~lf~l~~ni~lllsg~~~~~~~k  209 (509)
T COG3202         171 QFANEITTIEEAKRFYPLFGLGANISLLLSGEVTSWLSK  209 (509)
T ss_pred             HHHHHhhhHHHhhhhHHHHHHHHHHHHHHHHHHHHHHhh
Confidence            345677788899999999999999999999888887765

>TIGR01272 gluP glucose/galactose transporter

Probab=92.08  E-value=0.18  Score=44.79  Aligned_cols=59  Identities=12%  Similarity=0.119  Sum_probs=49.4

Q ss_pred             CcccccchhhHHHHHhccCCCcchhHHHHHHHhhhhhHHHHhhhhHHHHhhhcCCcchhHh
Q 021674            2 GIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYS   62 (309)
Q Consensus         2 Gig~g~~~p~~~~~i~~~~p~~~rg~~~g~~~~~~~~g~~lg~~l~~~l~~~~gWr~~F~i   62 (309)
                      |++.+..+|...+...+.+|++ .+++.++.. ...+|..+.|++.|.+.|+.|-|..|++
T Consensus       241 g~~~s~i~P~~~s~a~~~~~~~-~~~asai~~-~~~~Gg~i~P~l~G~lad~~g~~~a~~v  299 (310)
T TIGR01272       241 GLFNSIMFPTIFSLALNALGRH-TSQGSGILC-LAIVGGAIVPLLQGSLADCLGIQLAFAL  299 (310)
T ss_pred             HHHHHHHHHHHHHHHHhhhhhh-hhhhHHHHH-HHHhcchHHHHHHHHHHHhccchHHHHH
Confidence            6788899999999999998853 556667764 5578999999999999999999999985

Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.

>TIGR00769 AAA ADP/ATP carrier protein family

Probab=91.46  E-value=12  Score=35.46  Aligned_cols=33  Identities=12%  Similarity=0.100  Sum_probs=27.9

Q ss_pred             cCCCchHHHHHHHhHhHhhhhhHHHhHHHhhcc
Q 021674          244 IAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQ  276 (309)
Q Consensus       244 ~~~~~~g~a~~~~~~~~~lgg~i~~~~~g~l~~  276 (309)
                      ..+++...-.++.+.++++|..+++.+..++.+
T Consensus       158 ~t~~qakRfy~l~~~ganlg~i~sg~~~~~~~~  190 (472)
T TIGR00769       158 TTIDEAKRFYALFGLGANVALIFSGRTIKYFSK  190 (472)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            455678888899999999999999999888763

These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.

>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism]

Probab=90.92  E-value=5.9  Score=36.37  Aligned_cols=164  Identities=13%  Similarity=-0.039  Sum_probs=83.1

Q ss_pred             hhHhhcchHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhCCCccchhhHhhhhHHHHHHHHHHHHHHHHHHHHcCCChhh
Q 021674          111 WGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTT  190 (309)
Q Consensus       111 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~wlp~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~  190 (309)
                      +++++|-|....++......-.++-+--.-.+.-+.| +|++..+-++...+..-...+.....|+++.+  .|++....
T Consensus       258 l~~vLklk~v~~la~i~lt~K~gf~a~da~t~LkLle-~Gv~ke~Lal~~v~~~plqI~l~~~~gk~ta~--~~pl~~~l  334 (510)
T KOG3574|consen  258 LRDVLKLKSVRWLAGILLTGKLGFQAADALTSLKLLE-HGVPKEELALIAVPLVPLQIALPLYIGKWTAG--PRPLNVFL  334 (510)
T ss_pred             HHHHHcCccHHHHHHHHHHHHHHhhhhhhccchHHHH-cCCChhHheeeeeehhhHHHhhhhhheeecCC--CCcchHHH
Confidence            3566777777666666666666666666666666654 79998888777654444555555555555442  23322221


Q ss_pred             HHHHHHHHhhHHHHHHHHHhhccCc-----hHHHHHHHHHHHhhhhhhhc----chhhh-hhccCCCchHHHHHHHhHhH
Q 021674          191 VRKIMQSIGFLGPAFFLTQLSHVDS-----PAMAVLCMACSQGTDAFSQS----GLYSN-HQDIAPRYSGVLLGLSNTAG  260 (309)
Q Consensus       191 ~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~----~~~~~-~~~~~~~~~g~a~~~~~~~~  260 (309)
                      .+...-...................     +....++..+..........    ...+- .+-.+|+.-|+-+++.|+..
T Consensus       335 ka~~~R~~~~~~~t~Lv~~~~~~~~~~G~~~~~~~il~i~~y~~~~~~~ts~fv~~maf~aqisdp~iggTymTlLNTLs  414 (510)
T KOG3574|consen  335 KAVPYRLGGGLVQTALVWWTPTLGHSDGTFPRGYYILLITSYAFHQVFVTSMFVSGMAFHAQISDPAIGGTYMTLLNTLS  414 (510)
T ss_pred             HhhhHHHHHHHHHHHHHhhhcccccCCCceeechHHHHHHHHHHhhhHHHHHHHHHHHHHhhcCCcccCccHHHHHHHHH
Confidence            1111111111111111111111111     11111111111111111011    11111 12346778899999999999


Q ss_pred             hhhhhHHHhHHHhhccc
Q 021674          261 VLAGVFGTAATGYILQH  277 (309)
Q Consensus       261 ~lgg~i~~~~~g~l~~~  277 (309)
                      |+||..=..+...+.|.
T Consensus       415 nLGg~wp~tv~l~l~D~  431 (510)
T KOG3574|consen  415 NLGGNWPGTVALWLADG  431 (510)
T ss_pred             HhcCCcHHHHHHHhccc
Confidence            99999888888888874

>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters

Probab=90.67  E-value=3.3  Score=37.66  Aligned_cols=59  Identities=14%  Similarity=0.058  Sum_probs=47.9

Q ss_pred             CCchHHHHHHHhHhHhhhhhHHHhHHHhhcccCCchHHHHHHHHHHHHHHHHHHhhcCC
Q 021674          246 PRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSWDDVFKVSVGLYLVGTAVWNLFSTG  304 (309)
Q Consensus       246 ~~~~g~a~~~~~~~~~lgg~i~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  304 (309)
                      ++++...........|+|+.+++.+.+++-++.+|...|.+..+..+++.+++..-.++
T Consensus        67 ~~~~~~~F~~fY~~in~G~~~~~~~~~~i~~~~~~~~~f~i~~~~~~~~~~~f~~~~~~  125 (372)
T PF00854_consen   67 DSRRDSFFNWFYWGINIGSLFSPTLVPYIQQNYGWFLGFGIPAIGMLLALIVFLSGRKR  125 (372)
T ss_dssp             TTHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCS-HHHHHHHHHHHHHHHHHHHHCCCCT
T ss_pred             hhhhhhhHHHHHHHHhhhhHhhcccchhhccccchhhhhhHHHHHHHHHHHHHHhCCcC
Confidence            45677778888999999999999999999989999999999998888887765554333

The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.

>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins

Probab=87.73  E-value=1.3  Score=38.18  Aligned_cols=49  Identities=8%  Similarity=-0.072  Sum_probs=36.1

Q ss_pred             ccccchhhHHHHHhccCCCcchhHHHHHHHhhhhhHHHHhhhhHHHHhhh
Q 021674            4 GEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHR   53 (309)
Q Consensus         4 g~g~~~p~~~~~i~~~~p~~~rg~~~g~~~~~~~~g~~lg~~l~~~l~~~   53 (309)
                      +.+....++...-.+.|| ++||++.|+.-+...+++.+=..+-..+-+.
T Consensus       109 s~~~~~ta~lvt~~~NFP-~~RG~vvgilk~~~GLSaai~t~i~~~~f~~  157 (250)
T PF06813_consen  109 SSCWFNTASLVTCVRNFP-RSRGTVVGILKGFFGLSAAIFTQIYSAFFGD  157 (250)
T ss_pred             cHHHhhhHHHHHHHHhCc-cccCceehhhhHHHHhHHHHHHHHHHHHcCC
Confidence            333444566677778998 5899999999999999987766665555444

>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans

Probab=87.53  E-value=13  Score=29.52  Aligned_cols=29  Identities=21%  Similarity=0.265  Sum_probs=22.2

Q ss_pred             hhhH-hhhhHHHHHHHHHHHHHHHHHHHHc
Q 021674          156 SGLF-CVLPWLTMAFSANLGGWIADTLVSK  184 (309)
Q Consensus       156 ~g~~-~~~~~~~~~ig~~~~G~l~dr~~~r  184 (309)
                      .|.. +.+......+.+++++.+.+|+|.|
T Consensus        38 ~G~~slai~Y~~~~~s~l~~P~iv~~lg~K   67 (156)
T PF05978_consen   38 LGYYSLAILYGSFAISCLFAPSIVNKLGPK   67 (156)
T ss_pred             ccHHHHHHHHHHHHHHHHhHHHHHHHHhhH
Confidence            3444 4566677888899999999999865

UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].

>PF02990 EMP70: Endomembrane protein 70; InterPro: IPR004240 The transmembrane 9 superfamily protein (TM9SF) may function as a channel or small molecule transporter

Probab=87.53  E-value=5.1  Score=38.48  Aligned_cols=70  Identities=17%  Similarity=0.297  Sum_probs=38.9

Q ss_pred             hHhhcchHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhCC-CccchhhHhhhhHHHHHHHHHHHHHHHHHHHH
Q 021674          112 GLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHF-NLTESGLFCVLPWLTMAFSANLGGWIADTLVS  183 (309)
Q Consensus       112 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~wlp~~l~~~~g~-s~~~~g~~~~~~~~~~~ig~~~~G~l~dr~~~  183 (309)
                      .++||.|+--. .++.+. ..|.-.+..-+-..+....|+ ++.+-|.++....+...+.+.++|+.+-|+-+
T Consensus       252 gDVFR~P~~~~-lls~lv-G~G~Qll~~~~~~~~~a~~g~~~~~~rg~l~t~~i~~y~~~~~iaGy~S~~~yk  322 (521)
T PF02990_consen  252 GDVFRPPKHPM-LLSALV-GTGIQLLFMALVTLFFAALGFLSPNNRGSLLTAAIILYALTSFIAGYVSARLYK  322 (521)
T ss_pred             HHHhcCcCCch-HHHhHh-cchhhhhHHHHHHHHHHHhhhccccCcchHHHHHHHHHHHHhhHHHHHHHHHHH
Confidence            56788876322 222222 223222222222233334454 66666777766677778888888888888753

Proteins in this group are endosomal integral membrane proteins.; GO: 0016021 integral to membrane

>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]

Probab=86.26  E-value=1.5  Score=40.81  Aligned_cols=64  Identities=14%  Similarity=0.087  Sum_probs=45.9

Q ss_pred             HHHHHHHHHHHHHHHHhHHHHHHHHhCCCccchhhHhhhhHHHHHHHHHHHHHHHHH----HHHcCCCh
Q 021674          124 IVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADT----LVSKGLSV  188 (309)
Q Consensus       124 ~~~~~~~~~~~~~~~~wlp~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~G~l~dr----~~~r~~~~  188 (309)
                      ....+...++.-.-.+++|+|+++ .|.+-.-.+.+-....+.+.+..++.|..+||    +||||..+
T Consensus        38 ~~ia~Gvqf~wA~elsy~tPyl~~-lGvphk~~S~iw~~gPi~G~~vQP~vG~~SDrc~sr~GRRRPfI  105 (498)
T KOG0637|consen   38 ASIAAGVQFGWALELSYLTPYLQS-LGVPHKWSSIIWLCGPLSGLLVQPLVGSASDRCTSRYGRRRPFI  105 (498)
T ss_pred             HHHHHHHHHHHHHHhccccHHHHH-cCCCcccccccccccccccceecccccccccccccccccccchH
Confidence            333344444444455899999986 59988777777776777888888999999998    56665433

>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]

Probab=85.59  E-value=0.82  Score=40.12  Aligned_cols=57  Identities=14%  Similarity=0.125  Sum_probs=46.2

Q ss_pred             HHHHhccCCCcchhHHHHHHHhhhhhHHHHhhhhHHHHhhhc---CCcchhHh-hhhHHHH
Q 021674           13 NNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRF---GWPSVFYS-FGSLGTV   69 (309)
Q Consensus        13 ~~~i~~~~p~~~rg~~~g~~~~~~~~g~~lg~~l~~~l~~~~---gWr~~F~i-~~~~~~v   69 (309)
                      +..++...|+++.|++.|+..+..++|-.+.+.+.+.+.++-   .|-.+|++ ++.+++.
T Consensus       374 WP~va~~vpE~qLGTaygf~qsIqNLgla~i~Iiag~i~d~~g~y~~le~ffl~~~~~aL~  434 (459)
T KOG4686|consen  374 WPCVASLVPEEQLGTAYGFIQSIQNLGLAFIPIIAGFIADGDGSYDNLEAFFLIIGLMALT  434 (459)
T ss_pred             hhhhhhhCCHHHhcchHHHHHHHHhhhhhHHhhhhheeecCCCchhhHHHHHHHHHHHHHH
Confidence            446677889999999999999999999999999999998864   47777775 3444443

>KOG1237 consensus H+/oligopeptide symporter [Amino acid transport and metabolism]

Probab=82.89  E-value=49  Score=32.27  Aligned_cols=172  Identities=15%  Similarity=0.149  Sum_probs=87.7

Q ss_pred             HHHHHHHHHHHHhHHHHHHHHhCCCccchhhHhhhhHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHhhHHHHHHH
Q 021674          128 FCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFL  207 (309)
Q Consensus       128 ~~~~~~~~~~~~wlp~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~~~~~~~~~~~  207 (309)
                      .+-..++|++..-+=.|+.++++.+...+.-......-......+.+++++|.+-.|.+.+.... .+...++.+..+..
T Consensus        47 ~~e~~a~~g~~~nlv~ylt~~~~~~~~~aa~~v~~f~G~~~~~~l~g~~laD~f~gry~tI~~~s-~i~~~G~~~lt~~a  125 (571)
T KOG1237|consen   47 VLERLAFFGLVSNLVTYLTLELHASGGGAANNVNAFGGTQFLLPLLGAFLADSFLGRYFTINIGS-LISLLGLFGLTLSA  125 (571)
T ss_pred             HHHHHhHhcchhHHHHHHHHHhccchHHHHHHHHHHhhHHHHHHHHHHHHHHHHhHHHHHHHHHH-HHHHHHHHHHHHHH
Confidence            34455677777778889999999987655555555555566777899999999876632221110 11111111111110


Q ss_pred             --HHhhc-------c----CchH-HHHHHHHHHHhhhhhhh----cchhhhhhc----cCCC-ch--HHHHHHHhHhHhh
Q 021674          208 --TQLSH-------V----DSPA-MAVLCMACSQGTDAFSQ----SGLYSNHQD----IAPR-YS--GVLLGLSNTAGVL  262 (309)
Q Consensus       208 --~~~~~-------~----~~~~-~~~~~~~~~~~~~~~~~----~~~~~~~~~----~~~~-~~--g~a~~~~~~~~~l  262 (309)
                        .....       .    ..+. .....+..+....+.+.    +.+.+-..|    ..|+ .+  ..-........++
T Consensus       126 ~~~~l~p~~~~~~~~~~~c~~~s~~q~~~~~~~l~lia~G~gg~r~~~~~fGadQfd~~~~~~~~~~~~fFnW~yf~~~~  205 (571)
T KOG1237|consen  126 MIPALLPFMCKFKPGGNVCESPSKLQLAVLYGALYLIALGAGGIRPCLLAFGADQFDELDPVEVKGIPSFFNWFYFSQNG  205 (571)
T ss_pred             HhhhcCCccccCCCCCCcccCcchHHHHHHHHHHHHheeccCCCCCcchhhcccccCccCcchhhCcccchhHHHHHHHH
Confidence              00000       0    0010 11111111111111111    111111111    1232 22  2334444555677


Q ss_pred             hhhHHHhHHHhhcccCCchHHHHHHHHHHHHHHHHHHh
Q 021674          263 AGVFGTAATGYILQHGSWDDVFKVSVGLYLVGTAVWNL  300 (309)
Q Consensus       263 gg~i~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~  300 (309)
                      |..++..+.-++=|+.+|...|.+..++.+++.+++..
T Consensus       206 g~l~a~t~~vyiq~~~~w~lgf~i~~~~~~lai~iF~~  243 (571)
T KOG1237|consen  206 GALLAQTVLVYIQDNVGWKLGFGIPTVLNALAILIFLP  243 (571)
T ss_pred             HHHHHHHHHHhhhhcccceeeccHHHHHHHHHHHHHHc
Confidence            88888888888878888999888887777777666543

>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]

Probab=82.55  E-value=42  Score=32.04  Aligned_cols=34  Identities=21%  Similarity=0.331  Sum_probs=29.6

Q ss_pred             cCCCchHHHHHHHhHhHhhhhhHHHhHHHhhccc
Q 021674          244 IAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQH  277 (309)
Q Consensus       244 ~~~~~~g~a~~~~~~~~~lgg~i~~~~~g~l~~~  277 (309)
                      .+|..-|+-+.+.|+..|+||---..++=+++|.
T Consensus       434 SDP~IGGTYMTLLNTvSNLGGtWP~~~vL~lVD~  467 (544)
T PF13000_consen  434 SDPAIGGTYMTLLNTVSNLGGTWPRTFVLWLVDY  467 (544)
T ss_pred             cCcccchHHHHHHHHHHhcCCCchHHHHHHHhhh
Confidence            4688999999999999999998888887777774

This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane

>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans

Probab=82.40  E-value=1.6  Score=34.66  Aligned_cols=50  Identities=16%  Similarity=0.284  Sum_probs=42.9

Q ss_pred             CCcccccchhhHHHHHhccCCCcchhHHHHHHHhhhhhHHHHhhhhHHHH
Q 021674            1 MGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFL   50 (309)
Q Consensus         1 ~Gig~g~~~p~~~~~i~~~~p~~~rg~~~g~~~~~~~~g~~lg~~l~~~l   50 (309)
                      .|+|++..|.+.-.++.+..++++|+|..++.-+....+.++|..+.-.+
T Consensus        99 ~G~~~a~lW~aqg~ylt~~s~~~~~~~~~~ifw~i~~~s~i~G~~~~~~~  148 (156)
T PF05978_consen   99 LGFGAALLWTAQGTYLTSYSTEETIGRNTGIFWAIFQSSLIFGNLFLFFI  148 (156)
T ss_pred             HhhhhHHhhHhhhHHHHHcCCHHHHhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence            48899999999999999999999999999998888888887777665443

UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	309
1pw4_A	451	Glycerol-3-phosphate transporter; transmembrane, i	9e-45

>1pw4_A Glycerol-3-phosphate transporter; transmembrane, inner membrane, major facilitator superfamily, secondary active membrane transporter; 3.30A {Escherichia coli} SCOP: f.38.1.1 Length = 451

 Score =  157 bits (398), Expect = 9e-45
 Identities = 58/314 (18%), Positives = 108/314 (34%), Gaps = 12/314 (3%)

Query: 1   MGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGS-VTGLAFSPFLIHRFGWPSV 59
            G  +G+  P     +  W    ER   +++      +G  +  L F   +     W + 
Sbjct: 129 CGWFQGMGWPPCGRTMVHWWSQKERGGIVSVWNCAHNVGGGIPPLLFLLGMAWFNDWHAA 188

Query: 60  FYSFGSLGTVWFTVWLSKAHSSPAEDPQLRPAEKKLI-----VSSCASKEPVKTIPWGLI 114
            Y       +      +    +P         E K             +   K I    +
Sbjct: 189 LYMPAFCAILVALFAFAMMRDTPQSCGLPPIEEYKNDYPDDYNEKAEQELTAKQIFMQYV 248

Query: 115 LSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLG 174
           L    +W + +++       + +L W PTY  +V HF L +S     L          L 
Sbjct: 249 LPNKLLWYIAIANVFVYLLRYGILDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLC 308

Query: 175 GWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSPAMAVLCMACSQGTDAFSQ 234
           GW++D +       T V      +  +  A  +  ++   +P + ++CM           
Sbjct: 309 GWMSDKVFRGNRGATGVFF----MTLVTIATIVYWMNPAGNPTVDMICMIVIGFLIYGPV 364

Query: 235 SGLYSNHQDIAPRYS-GVLLGLSNTAGVLAG-VFGTAATGYILQHGSWDDVFKVSVGLYL 292
             +  +  ++AP+ + G   G +   G L G V  +A  GY +    WD  F V +G  +
Sbjct: 365 MLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFFGWDGGFMVMIGGSI 424

Query: 293 VGTAVWNLFSTGEK 306
           +   +  +   GEK
Sbjct: 425 LAVILLIVVMIGEK 438

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	309
1pw4_A	451	Glycerol-3-phosphate transporter; transmembrane, i	99.96
3o7q_A	438	L-fucose-proton symporter; transporter, multi-PASS	99.94
2gfp_A	375	EMRD, multidrug resistance protein D; membrane pro	99.9
4aps_A	491	DI-OR tripeptide H+ symporter; transport protein,	99.88
2cfq_A	417	Lactose permease; transport, transport mechanism,	99.88
4gc0_A	491	D-xylose-proton symporter; MFS, transport protein;	99.82
2xut_A	524	Proton/peptide symporter family protein; transport	99.72
4aps_A	491	DI-OR tripeptide H+ symporter; transport protein,	99.48
2xut_A	524	Proton/peptide symporter family protein; transport	99.4
1pw4_A	451	Glycerol-3-phosphate transporter; transmembrane, i	99.29
3o7q_A	438	L-fucose-proton symporter; transporter, multi-PASS	99.28
2cfq_A	417	Lactose permease; transport, transport mechanism,	99.16
2gfp_A	375	EMRD, multidrug resistance protein D; membrane pro	99.13
4gc0_A	491	D-xylose-proton symporter; MFS, transport protein;	98.13

>1pw4_A Glycerol-3-phosphate transporter; transmembrane, inner membrane, major facilitator superfamily, secondary active membrane transporter; 3.30A {Escherichia coli} SCOP: f.38.1.1

Probab=99.96  E-value=3.5e-28  Score=224.47  Aligned_cols=292  Identities=16%  Similarity=0.196  Sum_probs=202.3

Q ss_pred             CCcccccchhhHHHHHhccCCCcchhHHHHHHHhhhhhHHHHhhhhHHHHhhhcC-CcchhHhhhhHHHHHHHHHHhhcc
Q 021674            1 MGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFG-WPSVFYSFGSLGTVWFTVWLSKAH   79 (309)
Q Consensus         1 ~Gig~g~~~p~~~~~i~~~~p~~~rg~~~g~~~~~~~~g~~lg~~l~~~l~~~~g-Wr~~F~i~~~~~~v~~~~~~~~~~   79 (309)
                      +|++.|...|...++++|++|+|||++++++.+.+.++|.++++.+++++.+++| ||+.|++.+++.++..++.+...+
T Consensus       129 ~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g~w~~~f~~~~~~~~~~~~~~~~~~~  208 (451)
T 1pw4_A          129 CGWFQGMGWPPCGRTMVHWWSQKERGGIVSVWNCAHNVGGGIPPLLFLLGMAWFNDWHAALYMPAFCAILVALFAFAMMR  208 (451)
T ss_dssp             HHHHHHHTHHHHHHHHHTTCTTTHHHHHHHHHHHHHHHHHTSHHHHHHHHHHHTCCSTTCTHHHHHHHHHHHHHHHHHCC
T ss_pred             HHHHhhhccchHHHHHHHHCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhhcc
Confidence            4788899999999999999999999999999999999999999999999999999 999999988877665444444556


Q ss_pred             cCCCCCCCCCHHHH----HHHHhccCC-CCCCCCCChhHhhcchHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhCCCcc
Q 021674           80 SSPAEDPQLRPAEK----KLIVSSCAS-KEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLT  154 (309)
Q Consensus        80 ~~p~~~~~~~~~~~----~~~~~~~~~-~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~wlp~~l~~~~g~s~~  154 (309)
                      |+|++..+.++++.    +...+++.+ +...++..+++++|+|.+|...+..++.....+++.+|+|.|+++.+|++..
T Consensus       209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~  288 (451)
T 1pw4_A          209 DTPQSCGLPPIEEYKNDYPDDYNEKAEQELTAKQIFMQYVLPNKLLWYIAIANVFVYLLRYGILDWSPTYLKEVKHFALD  288 (451)
T ss_dssp             CSSTTTCCCSCTTTCCC-------------CCTHHHHHHTSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHBTTBSCCCHH
T ss_pred             CCHhhcCCCChhhhcccccccchhhhhcccccccchHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHH
Confidence            65543211111100    000000000 0010111146778999999988888888888899999999999988999999


Q ss_pred             chhhHhhhhHHHHHHHHHHHHHHHHHH--HHcCCChhhHHHHHHHHhhHHHHHHHHHhhcc--CchHHHH-HHHHHHHhh
Q 021674          155 ESGLFCVLPWLTMAFSANLGGWIADTL--VSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHV--DSPAMAV-LCMACSQGT  229 (309)
Q Consensus       155 ~~g~~~~~~~~~~~ig~~~~G~l~dr~--~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~-~~~~~~~~~  229 (309)
                      +.+.+..+..++..++.++.|+++||+  ++|+        .+.....+............  ++..... .....+.+.
T Consensus       289 ~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~  360 (451)
T 1pw4_A          289 KSSWAYFLYEYAGIPGTLLCGWMSDKVFRGNRG--------ATGVFFMTLVTIATIVYWMNPAGNPTVDMICMIVIGFLI  360 (451)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHTSTTCHH--------HHHHHHHHHHHHHHHHTTSCCTTCHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCch--------hHHHHHHHHHHHHHHHHHHhcccCHHHHHHHHHHHHHHH
Confidence            999999999999999999999999998  6542        12111111111222222222  1332222 222222222


Q ss_pred             hhhhhcchhhhhhc-cCCCchHHHHHHHhHhHhh-hhhHHHhHHHhhcccCCchHHHHHHHHHHHHHHHHHHhh
Q 021674          230 DAFSQSGLYSNHQD-IAPRYSGVLLGLSNTAGVL-AGVFGTAATGYILQHGSWDDVFKVSVGLYLVGTAVWNLF  301 (309)
Q Consensus       230 ~~~~~~~~~~~~~~-~~~~~~g~a~~~~~~~~~l-gg~i~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~  301 (309)
                      ... .........+ .+++.++.+.++.+...++ |+.++|.+.|.+.|+.++...|.+.+++.+++.+.....
T Consensus       361 ~~~-~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~  433 (451)
T 1pw4_A          361 YGP-VMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFFGWDGGFMVMIGGSILAVILLIVV  433 (451)
T ss_dssp             THH-HHHHHHHHHHTSCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSHHHHHHHHHHHHHHHHHHHHH
T ss_pred             hch-HHHHHHHHHHHhchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHH
Confidence            211 1222222333 4556799999999999999 999999999999999889999988877777766554443

>3o7q_A L-fucose-proton symporter; transporter, multi-PASS membrane protei transport protein; HET: BNG; 3.14A {Escherichia coli} PDB: 3o7p_A*

Probab=99.94  E-value=3.6e-26  Score=210.28  Aligned_cols=280  Identities=10%  Similarity=0.075  Sum_probs=191.5

Q ss_pred             CCcccccchhhHHHHHhccCCCcchhHHHHHHHhhhhhHHHHhhhhHHHHh-hhcC------------------------
Q 021674            1 MGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLI-HRFG------------------------   55 (309)
Q Consensus         1 ~Gig~g~~~p~~~~~i~~~~p~~~rg~~~g~~~~~~~~g~~lg~~l~~~l~-~~~g------------------------   55 (309)
                      +|+|.|...|...++++|++|+|||++++++.+...++|.++++.+++++. +..+                        
T Consensus       127 ~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  206 (438)
T 3o7q_A          127 IAAGLGCLETAANPFVTVLGPESSGHFRLNLAQTFNSFGAIIAVVFGQSLILSNVPHQSQDVLDKMSPEQLSAYKHSLVL  206 (438)
T ss_dssp             HHHHHHHHHHHHHHHHHHSSCSTTHHHHHHHHHHHHHHHHHHHHHHTTHHHHTSSCCCCHHHHHHSCHHHHHHHHHHHHH
T ss_pred             HHhhHHHhhhhHHHHHHHHcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccccccCCcchhhhhhhhhhh
Confidence            478899999999999999999999999999999999999999999999998 5555                        


Q ss_pred             -CcchhHhhhhHHHHHHHHHHh-hcccCCCCCCCCCHHHHHHHHhccCCCCCCCCCChhHhhcchHHHHHHHHHHHHHHH
Q 021674           56 -WPSVFYSFGSLGTVWFTVWLS-KAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWG  133 (309)
Q Consensus        56 -Wr~~F~i~~~~~~v~~~~~~~-~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~  133 (309)
                       ||+.|++.+.+.++..++++. ..||++++++   ++          ++++..+.++++++|+|++|...+..++....
T Consensus       207 ~w~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~---~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  273 (438)
T 3o7q_A          207 SVQTPYMIIVAIVLLVALLIMLTKFPALQSDNH---SD----------AKQGSFSASLSRLARIRHWRWAVLAQFCYVGA  273 (438)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHCCCCCCTTTCC---CC----------SSTTSHHHHHHHHTTCSHHHHHHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHcCCccccccc---cc----------ccccchhhhHHHHHhChHHHHHHHHHHHHHHH
Confidence             999998777666554333332 2232221110   00          01111123467889999999988888888888


Q ss_pred             HHHHHHhHHHH-HHHHhCCCccchhhHhhhhHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHhhHHHHHHHHHhhc
Q 021674          134 TFILLTWMPTY-YNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSH  212 (309)
Q Consensus       134 ~~~~~~wlp~~-l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~  212 (309)
                      .+...+|+|.| +++.+|++..+++.+.....++..++.++.|+++||+++|+        .+. ...............
T Consensus       274 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~--------~~~-~~~~~~~~~~~~~~~  344 (438)
T 3o7q_A          274 QTACWSYLIRYAVEEIPGMTAGFAANYLTGTMVCFFIGRFTGTWLISRFAPHK--------VLA-AYALIAMALCLISAF  344 (438)
T ss_dssp             HHHHHHHHHHHHHHHSTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCHHH--------HHH-HHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhhhccCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcchH--------HHH-HHHHHHHHHHHHHHH
Confidence            88999999999 88888999999999999999999999999999999998763        111 111111122111222


Q ss_pred             cCchHHHHHHHHHHHhhhhhhhcchhhhhhccCCCchHHHHHHHhHhHhhhhhHHHhHHHhhcccCC-chHHHHHHHHHH
Q 021674          213 VDSPAMAVLCMACSQGTDAFSQSGLYSNHQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGS-WDDVFKVSVGLY  291 (309)
Q Consensus       213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~a~~~~~~~~~lgg~i~~~~~g~l~~~~~-~~~~~~~~~~~~  291 (309)
                      .++....+.....+++.+. ..+..++...+..|++++.+.++.+ .+++++.++|.+.|.+.|..+ +...|.+.+++.
T Consensus       345 ~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~  422 (438)
T 3o7q_A          345 AGGHVGLIALTLCSAFMSI-QYPTIFSLGIKNLGQDTKYGSSFIV-MTIIGGGIVTPVMGFVSDAAGNIPTAELIPALCF  422 (438)
T ss_dssp             CCHHHHHHHHHHHHHHHTT-HHHHHHHHHHSSCGGGHHHHHHHHH-HTTHHHHHHHHHHHHHHHHHTSSGGGGHHHHHHH
T ss_pred             cCCcHHHHHHHHHHHHHHH-HHHHHHHHHHhhccccccchhhHHH-HHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHH
Confidence            2233222222222322221 1222333323344445888888766 678999999999999999855 888888766555


Q ss_pred             HHHHHHHHhhcCCc
Q 021674          292 LVGTAVWNLFSTGE  305 (309)
Q Consensus       292 ~~~~~~~~~~~~~~  305 (309)
                      ++..+ +.++.+|+
T Consensus       423 ~~~~~-~~~~~~~~  435 (438)
T 3o7q_A          423 AVIFI-FARFRSQT  435 (438)
T ss_dssp             HHHHH-HHTTCCCC
T ss_pred             HHHHH-HHHHHHhc
Confidence            54443 33444333

>2gfp_A EMRD, multidrug resistance protein D; membrane protein, multidrug transporter; 3.50A {Escherichia coli}

Probab=99.90  E-value=2.4e-25  Score=201.11  Aligned_cols=263  Identities=11%  Similarity=0.061  Sum_probs=185.8

Q ss_pred             CCcccccchhhHHHHHhccCCCcchhHHHHHHHhhhhhHHHHhhhhHHHHhhhcCCcchhHhhhhHHHHHHHHHHhhccc
Q 021674            1 MGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVWLSKAHS   80 (309)
Q Consensus         1 ~Gig~g~~~p~~~~~i~~~~p~~~rg~~~g~~~~~~~~g~~lg~~l~~~l~~~~gWr~~F~i~~~~~~v~~~~~~~~~~~   80 (309)
                      +|++.+...|...+++.|++|+|||++++++.+.+.++|.++++++++++.+++|||+.|++.+++.++..+......||
T Consensus        98 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  177 (375)
T 2gfp_A           98 QGMGTGVGGVMARTLPRDLYERTQLRHANSLLNMGILVSPLLAPLIGGLLDTMWNWRACYLFLLVLCAGVTFSMARWMPE  177 (375)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTSSCCSHHHHHHHHHHHHHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHHHCCCCCSSCC
T ss_pred             HHHHHHhhhhhHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHCcc
Confidence            47788889999999999999999999999999999999999999999999999999999998777776543322333344


Q ss_pred             CCCCCCCCCHHHHHHHHhccCCCCCCCCCChhHhhcchHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhCCCccchhhHh
Q 021674           81 SPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFC  160 (309)
Q Consensus        81 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~wlp~~l~~~~g~s~~~~g~~~  160 (309)
                      +++++++              +++  +..++++++|+|+++...+..++.....+...+|+|.|+++.+|+++.+.+.+.
T Consensus       178 ~~~~~~~--------------~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~  241 (375)
T 2gfp_A          178 TRPVDAP--------------RTR--LLTSYKTLFGNSGFNCYLLMLIGGLAGIAAFEACSGVLMGAVLGLSSMTVSILF  241 (375)
T ss_dssp             CSTTTCC--------------CCC--TTTCSTHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSCSSHHHHHHHHHHHHHHH
T ss_pred             cCCCCcc--------------ccc--HHHHHHHHhcCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHH
Confidence            3322110              011  123456789999999888888888888899999999999998999999999999


Q ss_pred             hhhHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHh-h-HHHHHHHHHhhccCchHHH-HHHHHHHHhhhhhhhcch
Q 021674          161 VLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIG-F-LGPAFFLTQLSHVDSPAMA-VLCMACSQGTDAFSQSGL  237 (309)
Q Consensus       161 ~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~  237 (309)
                      ....++..++.++.+++.||.+++  .      ...... . .............++.+.. ......+++.+. ..+..
T Consensus       242 ~~~~~~~~~~~~~~~~l~~r~~~~--~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~-~~~~~  312 (375)
T 2gfp_A          242 ILPIPAAFFGAWFAGRPNKRFSTL--M------WQSVICCLLAGLLMWIPDWFGVMNVWTLLVPAALFFFGAGM-LFPLA  312 (375)
T ss_dssp             HTHHHHHHHHHHHHHTTTTHHHHH--H------HHHHHHHHHTSSSSSHHHHHHHHHHHHHHHHHHHHHHHHHH-TSSTT
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHH--H------HHHHHHHHHHHHHHHHHhhhccccHHHHHHHHHHHHHHHHH-hhHHH
Confidence            999999999999999999998752  0      010010 0 0000001100001122221 112222222221 12223


Q ss_pred             hhhhhccCCCchHHHHHHHhHhHhhhhhHHHhHHHhhcccCCchHHHHHHH
Q 021674          238 YSNHQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSWDDVFKVSV  288 (309)
Q Consensus       238 ~~~~~~~~~~~~g~a~~~~~~~~~lgg~i~~~~~g~l~~~~~~~~~~~~~~  288 (309)
                      .....|..|++++.+.++.+..+++|+.++|.+.|.+.++.++...+.+.+
T Consensus       313 ~~~~~~~~p~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~  363 (375)
T 2gfp_A          313 TSGAMEPFPFLAGTAGALVGGLQNIGSGVLASLSAMLPQTGQGSLGLLMTL  363 (375)
T ss_dssp             HHHHHTHHHHHHHHHHHHHHHHHHHHHHCCSTTCTHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHhCCcccchHHHHHHHHHHHHHHHHHHHHHHHhcCCcccHHHHHHH
Confidence            333344445789999999999999999999999999988777777766543

>4aps_A DI-OR tripeptide H+ symporter; transport protein, peptide transport, major facilitator SUPE transporter, MFS; 3.30A {Streptococcus thermophilus}

Probab=99.88  E-value=6.2e-22  Score=184.96  Aligned_cols=295  Identities=12%  Similarity=0.046  Sum_probs=174.8

Q ss_pred             CCcccccchhhHHHHHhccCCCcc--hhHHHHHHHhhhhhHHHHhhhhHHHHhhhcCCcchhHhhhhHHHHHHHHHHhhc
Q 021674            1 MGIGEGVAMPAMNNILSKWVPVAE--RSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVWLSKA   78 (309)
Q Consensus         1 ~Gig~g~~~p~~~~~i~~~~p~~~--rg~~~g~~~~~~~~g~~lg~~l~~~l~~~~gWr~~F~i~~~~~~v~~~~~~~~~   78 (309)
                      +|+|.|...|...++++|++|+++  |+++.++++.+.++|..+++++++++.++.|||+.|++.++..++..+..+...
T Consensus       118 ~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~  197 (491)
T 4aps_A          118 IIIGTGFLKPNVSTLVGTLYDEHDRRRDAGFSIFVFGINLGAFIAPLIVGAAQEAAGYHVAFSLAAIGMFIGLLVYYFGG  197 (491)
T ss_dssp             HHHHHHHHHHHHHHHHHHHSSSCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHhccchHHHHHHHHcCcccccceeeehHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHhC
Confidence            478899999999999999999998  788899899999999999999999999999999999987665544332222211


Q ss_pred             cc-CCC--CCCC--CCHHHHHHHHhc-----------------cCCCC------------------------CCCCCChh
Q 021674           79 HS-SPA--EDPQ--LRPAEKKLIVSS-----------------CASKE------------------------PVKTIPWG  112 (309)
Q Consensus        79 ~~-~p~--~~~~--~~~~~~~~~~~~-----------------~~~~~------------------------~~~~~~~~  112 (309)
                      ++ .++  ++++  .++++++...+.                 ....+                        ..+..+..
T Consensus       198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  277 (491)
T 4aps_A          198 KKTLDPHYLRPTDPLAPEEVKPLLVKVSLAVAGFIAIIVVMNLVGWNSLPAYINLLTIVAIAIPVFYFAWMISSVKVTST  277 (491)
T ss_dssp             HTTCCSCCSCCSCCCSHHHHHHHHHHCCCCCHHHHHHHHHHHHHSSCCTTHHHHHHHHHHHHHHHHHHHHHC--------
T ss_pred             cccccccccCCCCccccchhHHHHHHHHHHHHHHHHHHHHHHhccCcccccchhhhhHHHHHHHHHHHHHHhhcccccHH
Confidence            11 111  1111  112221110000                 00000                        00000001


Q ss_pred             HhhcchHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhCCCccchhhHhhhhHHHHHHHHHHHHHHHHHHHHcCCChhhHH
Q 021674          113 LILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVR  192 (309)
Q Consensus       113 ~l~~~~~~~~~~~~~~~~~~~~~~~~~wlp~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~  192 (309)
                      +..+....+......++....+....+++|.|+++..+.+..+.+.+.....++..++.++.|+++||++||+....  +
T Consensus       278 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~r~~~r~~~~~--~  355 (491)
T 4aps_A          278 EHLRVVSYIPLFIAAVLFWAIEEQGSVVLATFAAERVDSSWFPVSWFQSLNPLFIMLYTPFFAWLWTAWKKNQPSSP--T  355 (491)
T ss_dssp             ----CTTHHHHHHHHHHHHHHHGGGGTHHHHHHHHSCCCSSSCSGGGTTHHHHHHHHHHHHHHHHHHHTTTC---CH--H
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHhccCccCHHHHhccchHHHHHHHHHHHHHHHHHhccCCCch--H
Confidence            11122223444444444444556667889999999889988889999999999999999999999999988754321  1


Q ss_pred             HHHHHHhhHHHHHHHH--Hh-h-----c-cCchHHH-HHHHHHHHhhhhhhhcchhhhhhc-cCCCchHHHHHHHhHhHh
Q 021674          193 KIMQSIGFLGPAFFLT--QL-S-----H-VDSPAMA-VLCMACSQGTDAFSQSGLYSNHQD-IAPRYSGVLLGLSNTAGV  261 (309)
Q Consensus       193 ~~~~~~~~~~~~~~~~--~~-~-----~-~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~g~a~~~~~~~~~  261 (309)
                      ..  ..+.........  .. .     . ..+..+. ......+.+.+. ..+..+....+ .+++.++.+.++.+...+
T Consensus       356 ~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~-~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~  432 (491)
T 4aps_A          356 KF--AVGLMFAGLSFLLMAIPGALYGTSGKVSPLWLVGSWALVILGEML-ISPVGLSVTTKLAPKAFNSQMMSMWFLSSS  432 (491)
T ss_dssp             HH--HHHHHHHHHHHTTTHHHHHHCCCCTTCCTHHHHHHHHHHHHHHHT-TTTHHHHHHHHHTTTTCSSSSTHHHHHHHH
T ss_pred             HH--HHHHHHHHHHHHHHHHHHHhcCCCCCccHHHHHHHHHHHHHHHHH-HhHHHHHHHHHhCCHHHHHHHHHHHHHHHH
Confidence            11  111111111111  01 0     0 0122222 222222222221 11222333333 455679999999999999


Q ss_pred             hhhhHHHhHHHhhcccCCchHHHHHHHHHHHHHHHHHHhh
Q 021674          262 LAGVFGTAATGYILQHGSWDDVFKVSVGLYLVGTAVWNLF  301 (309)
Q Consensus       262 lgg~i~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~  301 (309)
                      +|+.++|.+.+.+.|. ++...|.+.+++.+++.+....+
T Consensus       433 ~g~~i~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~  471 (491)
T 4aps_A          433 VGSALNAQLVTLYNAK-SEVAYFSYFGLGSVVLGIVLVFL  471 (491)
T ss_dssp             HHHHHHHHHGGGGGGS-STTHHHHHTHHHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHHHHhcc-cHHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999988776 45566766666665555444444

>2cfq_A Lactose permease; transport, transport mechanism, lactose/H+ symport, sugar transport, transmembrane, formylation; 2.95A {Escherichia coli} SCOP: f.38.1.2 PDB: 1pv7_A* 1pv6_A 2cfp_A 2v8n_A 2y5y_A*

Probab=99.88  E-value=4.2e-22  Score=182.95  Aligned_cols=286  Identities=11%  Similarity=0.037  Sum_probs=172.7

Q ss_pred             cccccchhhHHHHHhccCCC--cchhHHHHHHHhhhhhHHHHhhhhHHHHhhhcCCcchhHhhhhHHHHHHHHHHhhccc
Q 021674            3 IGEGVAMPAMNNILSKWVPV--AERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVWLSKAHS   80 (309)
Q Consensus         3 ig~g~~~p~~~~~i~~~~p~--~~rg~~~g~~~~~~~~g~~lg~~l~~~l~~~~gWr~~F~i~~~~~~v~~~~~~~~~~~   80 (309)
                      ++.|..+++....+.++.++  ++|++..+......++|..+++.+++++.+ .+||+.|++.+++.++..+..+ ..++
T Consensus       112 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~l~~~l~~-~~~~~~f~~~~~~~~~~~~~~~-~~~~  189 (417)
T 2cfq_A          112 IYLGFCFNAGAPAVEAFIEKVSRRSNFEFGRARMFGCVGWALGASIVGIMFT-INNQFVFWLGSGCALILAVLLF-FAKT  189 (417)
T ss_dssp             SSTTHHHHTTHHHHHHHHHHHHHHHTCCHHHHSSSTTTHHHHHHHHHHHHHH-HCSHHHHTTTTTTTTTHHHHSC-SSCC
T ss_pred             HHHHHHHhhhHHHHHHHHHHhhhhcccchHHHHHHHHHHHHHHHHHHHHHHH-hchhHHHHHHHHHHHHHHHHHH-HcCc
Confidence            33444455555666666654  466888889988899999999999999987 5899999986666544333322 2222


Q ss_pred             CCCCCCCCCHHHHHHHHhccCCCCCCCCCChhHhhcchHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhCC---Cccchh
Q 021674           81 SPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHF---NLTESG  157 (309)
Q Consensus        81 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~wlp~~l~~~~g~---s~~~~g  157 (309)
                      +|+++++  ++|+    + +.++++.+..++++++|+|++|...+..++....++.+.+|+|.|+++.++.   +..+.+
T Consensus       190 ~~~~~~~--~~~~----~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g  262 (417)
T 2cfq_A          190 DAPSSAT--VANA----V-GANHSAFSLKLALELFRQPKLWFLSLYVIGVSCTYDVFDQQFANFFTSFFATGEQGTRVFG  262 (417)
T ss_dssp             CCSCSSC--SSSS----S-SSCCCCCCHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSSSHHHHTHHHH
T ss_pred             ccccccc--cccc----c-ccccccccHHHHHHHhcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCChhHHH
Confidence            2211110  0000    0 0001110111345688999988766665555555666778999999775542   344557


Q ss_pred             hHhhhhHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHhhHHHHHHHHHhhccCchHHHHHHH-HHHHhhhhhhhcc
Q 021674          158 LFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSPAMAVLCM-ACSQGTDAFSQSG  236 (309)
Q Consensus       158 ~~~~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~  236 (309)
                      ....+..++..++.++.|+++||+++|+        .+. .+....++........++....+... ..+.+.... ...
T Consensus       263 ~~~~~~~~~~~~~~~~~g~l~dr~g~~~--------~l~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~~~  332 (417)
T 2cfq_A          263 YVTTMGELLNASIMFFAPLIINRIGGKN--------ALL-LAGTIMSVRIIGSSFATSALEVVILKTLHMFEVPFL-LVG  332 (417)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHCHHH--------HHH-HHHHHHHHHHHHHTTCCSHHHHHHHTTHHHHHHHHH-HHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhcHHH--------HHH-HHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHH-HHH
Confidence            7777777888899999999999998763        111 12222222222222233333222211 111111111 111


Q ss_pred             hhhhhhc-cCCCchHHHHHH-HhHhHhhhhhHHHhHHHhhcccCCchHHHHHHHHHHHHHHHHHHhhcCCccc
Q 021674          237 LYSNHQD-IAPRYSGVLLGL-SNTAGVLAGVFGTAATGYILQHGSWDDVFKVSVGLYLVGTAVWNLFSTGEKV  307 (309)
Q Consensus       237 ~~~~~~~-~~~~~~g~a~~~-~~~~~~lgg~i~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  307 (309)
                      .+....| .+++.+|++.++ .|..+++|+.++|.+.|.+.|+.++...|.+.+++.+++.+....+.+++++
T Consensus       333 ~~~~~~~~~p~~~~g~~~g~~~~~~~~lg~~~gp~l~G~l~~~~g~~~~f~~~~~~~l~~~~~~~~~~~~~~~  405 (417)
T 2cfq_A          333 CFKYITSQFEVRFSATIYLVCFCFFKQLAMIFMSVLAGNMYESIGFQGAYLVLGLVALGFTLISVFTLSGPGP  405 (417)
T ss_dssp             HHHHHHHHSCHHHHHHHHHHHHTTTHHHHHHHHTHHHHTHHHHSHHHHHHHHHHHHHHHHHHHHTTSSCCSCT
T ss_pred             HHHHHHHHCCHHHHHHHHHHHHHHHHhHHHHHhhhhHHHHHHhcCcHHHHHHHHHHHHHHHHHHHhhhcCCCc
Confidence            2222333 355679999998 4888899999999999999998778888888888877777665555444444

>4gc0_A D-xylose-proton symporter; MFS, transport protein; HET: 6BG BNG; 2.60A {Escherichia coli} PDB: 4gbz_A* 4gby_A*

Probab=99.82  E-value=1.1e-19  Score=169.49  Aligned_cols=300  Identities=16%  Similarity=0.096  Sum_probs=174.3

Q ss_pred             CCcccccchhhHHHHHhccCCCcchhHHHHHHHhhhhhHHHHhhhhHHHHhhh--------cCCcchhHhhhhHHHHHHH
Q 021674            1 MGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHR--------FGWPSVFYSFGSLGTVWFT   72 (309)
Q Consensus         1 ~Gig~g~~~p~~~~~i~~~~p~~~rg~~~g~~~~~~~~g~~lg~~l~~~l~~~--------~gWr~~F~i~~~~~~v~~~   72 (309)
                      ||+|.|+..+.+..+++|+.|+++|++..++...+..+|.+++..++..+.+.        .+||..+.+..+..++. .
T Consensus       136 ~G~g~G~~~~~~~~~i~E~~p~~~rg~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~  214 (491)
T 4gc0_A          136 GGIGVGLASMLSPMYIAELAPAHIRGKLVSFNQFAIIFGQLLVYCVNYFIARSGDASWLNTDGWRYMFASECIPALLF-L  214 (491)
T ss_dssp             HHHHHHHHHHHHHHHHHTTSCGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCTTTTTTTHHHHHHHTTHHHHHHH-H
T ss_pred             HHHHHHHHHHHHHHHHHhhCCHHhhhhhHHhhhhhhhhhhhhhhhcchhhccccccccccchhhHHHhhhhhhhhhhh-h
Confidence            58999999999999999999999999999999999999999999888776543        35777777655555543 3


Q ss_pred             HHHhhcccCCCCCC-CCCHHHH-HHHHh---c----------cC-CCCCCCCCChhHhhcchHHHHHHHH-HHHHHHHHH
Q 021674           73 VWLSKAHSSPAEDP-QLRPAEK-KLIVS---S----------CA-SKEPVKTIPWGLILSKPPVWALIVS-HFCHNWGTF  135 (309)
Q Consensus        73 ~~~~~~~~~p~~~~-~~~~~~~-~~~~~---~----------~~-~~~~~~~~~~~~l~~~~~~~~~~~~-~~~~~~~~~  135 (309)
                      +.....||+|+... +.+.+|. +..++   +          +. .++..+.......++.++....... .+....+.+
T Consensus       215 ~~~~~~peSp~~L~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  294 (491)
T 4gc0_A          215 MLLYTVPESPRWLMSRGKQEQAEGILRKIMGNTLATQAVQEIKHSLDHGRKTGGRLLMFGVGVIVIGVMLSIFQQFVGIN  294 (491)
T ss_dssp             HHGGGSCCCHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTHHHHSCCTHHHHHHHHHHHHHHTCHH
T ss_pred             hhhhcCCCChHHHHHcCchhHHHHhHHHhcCCchhHHHHHHHHHHHHhhhhhhhHHHHhcccHHHHHHHHHHHHHHhhhh
Confidence            44445677775210 1111111 10000   0          00 0000001112223344444333333 333334456


Q ss_pred             HHHHhHHHHHHHHhCCCccchhhHhhhhHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHhhHHHHHHHHH-hhccC
Q 021674          136 ILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQ-LSHVD  214 (309)
Q Consensus       136 ~~~~wlp~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~  214 (309)
                      .+..|.|.+.+ ..+.+..+.........+...++.++++++.||+|||+....      .........+.+.. .....
T Consensus       295 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~dr~Grr~~~~~------~~~~~~~~~~~l~~~~~~~~  367 (491)
T 4gc0_A          295 VVLYYAPEVFK-TLGASTDIALLQTIIVGVINLTFTVLAIMTVDKFGRKPLQII------GALGMAIGMFSLGTAFYTQA  367 (491)
T ss_dssp             HHHHHHHHHHH-HSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSHHHHHH------HHHHHHHHHHHHHHHHHTTC
T ss_pred             HHHhcchHHHH-hcCCCccchhhHHHHHHHHHHHHHHHHHHHHHhhcCcchhcc------chHHHHHHHHHHHHHHhccc
Confidence            66666666665 467877777777778888999999999999999998742111      01111111111111 11222


Q ss_pred             chHHHHHHHHHHHhhhhhhhcc-hhhhhhccCC-CchHHHHHHHhHhHhhhhhHHHhHHHhhccc------CCchHHHHH
Q 021674          215 SPAMAVLCMACSQGTDAFSQSG-LYSNHQDIAP-RYSGVLLGLSNTAGVLAGVFGTAATGYILQH------GSWDDVFKV  286 (309)
Q Consensus       215 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~-~~~g~a~~~~~~~~~lgg~i~~~~~g~l~~~------~~~~~~~~~  286 (309)
                      .....+...............+ .+....|..| +.|+++.++.+..+++++++++.+.+.+.+.      .++...|++
T Consensus       368 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~fPt~~R~~~~g~~~~~~~~~~~i~~~~~p~l~~~~~~~~~~~~~~~~~i  447 (491)
T 4gc0_A          368 PGIVALLSMLFYVAAFAMSWGPVCWVLLSEIFPNAIRGKALAIAVAAQWLANYFVSWTFPMMDKNSWLVAHFHNGFSYWI  447 (491)
T ss_dssp             CHHHHHHHHHHHHHHHHTTTTHHHHHHHHHSSCTTTHHHHHHHHHHHHHHHHHHHHTHHHHHCHHHHHHHHHTTCHHHHH
T ss_pred             chHHHHHHHHHHHHHHHhHHHHHHHHHHHHhCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHH
Confidence            2222222211111111111111 2233345544 6899999999999999999999988877653      234456666


Q ss_pred             HHHHHHHHHHHHHh--hcCCcccc
Q 021674          287 SVGLYLVGTAVWNL--FSTGEKVV  308 (309)
Q Consensus       287 ~~~~~~~~~~~~~~--~~~~~~~~  308 (309)
                      .+++.+++.+...+  ..||++++
T Consensus       448 ~~~~~~~~~i~~~~~~PETkg~tL  471 (491)
T 4gc0_A          448 YGCMGVLAALFMWKFVPETKGKTL  471 (491)
T ss_dssp             HHHHHHHHHHHHHHHCCCCTTCCH
T ss_pred             HHHHHHHHHHHHHheecCCCCCCH
Confidence            66666666544333  36777654

>2xut_A Proton/peptide symporter family protein; transport protein, membrane protein, major facilitator super transporter; 3.62A {Shewanella oneidensis}

Probab=99.72  E-value=3.3e-17  Score=154.16  Aligned_cols=73  Identities=21%  Similarity=0.269  Sum_probs=64.0

Q ss_pred             CCcccccchhhHHHHHhccCCCcchhHHHHH---HHhhhhhHHHHhhhhHHHHhhhcCCcchhHhhhhHHHHHHHH
Q 021674            1 MGIGEGVAMPAMNNILSKWVPVAERSRSLAL---VYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTV   73 (309)
Q Consensus         1 ~Gig~g~~~p~~~~~i~~~~p~~~rg~~~g~---~~~~~~~g~~lg~~l~~~l~~~~gWr~~F~i~~~~~~v~~~~   73 (309)
                      +|++.|...|...++++|++|+++|+++.+.   .+...++|.++++.+++++.++.|||+.|++.+++.++..+.
T Consensus       119 ~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g~~~~f~~~~~~~~~~~~~  194 (524)
T 2xut_A          119 IALGSGGIKPLVSSFMGDQFDQSNKSLAQKAFDMFYFTINFGSFFASLSMPLLLKNFGAAVAFGIPGVLMFVATVF  194 (524)
T ss_dssp             HHHHHHTTHHHHHHHHHHTCSTTTTTHHHHHHHHHHHHHHHHHHHHHHTSTHHHHTSCHHHHHHHHHHHHHHHHHH
T ss_pred             HHHhccccchhHHHHHHHHcCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHH
Confidence            4788899999999999999999999887777   999999999999999999999999999999877776554333

>4aps_A DI-OR tripeptide H+ symporter; transport protein, peptide transport, major facilitator SUPE transporter, MFS; 3.30A {Streptococcus thermophilus}

Probab=99.48  E-value=2e-12  Score=120.32  Aligned_cols=174  Identities=10%  Similarity=0.072  Sum_probs=120.2

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHhHHHHHHHH-----hCCCccchhhHhhhhHHHHHHHHHHHHHHHHH-HHHcCCChhhH
Q 021674          118 PPVWALIVSHFCHNWGTFILLTWMPTYYNQV-----LHFNLTESGLFCVLPWLTMAFSANLGGWIADT-LVSKGLSVTTV  191 (309)
Q Consensus       118 ~~~~~~~~~~~~~~~~~~~~~~wlp~~l~~~-----~g~s~~~~g~~~~~~~~~~~ig~~~~G~l~dr-~~~r~~~~~~~  191 (309)
                      +..|.+....++...++|+...++|.|+++.     +|+|..+.+++.+...++..++.++.|+++|| +|||+      
T Consensus        13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~g~r~------   86 (491)
T 4aps_A           13 LGLSTLFMTEMWERFSYYGMRAILLYYMWFLISTGDLHITRATAASIMAIYASMVYLSGTIGGFVADRIIGARP------   86 (491)
T ss_dssp             THHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCHHH------
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchH------
Confidence            3566777777888888999999999999998     99999999999999999999999999999999 89763      


Q ss_pred             HHHHHHHhhHHHHHHHHHhhccCchHHHH-HHHHHHHhhhhhhhcchhhhhhc-cCCCc--hHHHHHHHhHhHhhhhhHH
Q 021674          192 RKIMQSIGFLGPAFFLTQLSHVDSPAMAV-LCMACSQGTDAFSQSGLYSNHQD-IAPRY--SGVLLGLSNTAGVLAGVFG  267 (309)
Q Consensus       192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-~~~~~--~g~a~~~~~~~~~lgg~i~  267 (309)
                        .+. .+.....+........++..... .....+.+.+.. .+.......| .++++  ++.+.++.+...++|..++
T Consensus        87 --~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~-~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~  162 (491)
T 4aps_A           87 --AVF-WGGVLIMLGHIVLALPFGASALFGSIILIIIGTGFL-KPNVSTLVGTLYDEHDRRRDAGFSIFVFGINLGAFIA  162 (491)
T ss_dssp             --HHH-HHHHHHHHHHHHHHSCCSTTHHHHHHHHHHHHHHHH-HHHHHHHHHHHSSSCTTHHHHHHHHHHHHHHHHHHHH
T ss_pred             --HHH-HHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHhc-cchHHHHHHHHcCcccccceeeehHHHHHHHHHHHHH
Confidence              111 22222222222222333333322 222233332221 1222222223 34455  8889998999999999999


Q ss_pred             HhHHHhhcccCCchHHHHHHHHHHHHHHHHHHhh
Q 021674          268 TAATGYILQHGSWDDVFKVSVGLYLVGTAVWNLF  301 (309)
Q Consensus       268 ~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~  301 (309)
                      |.+.+.+.++.+|+..|.+.+++.+++.+.+.+.
T Consensus       163 ~~~~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~  196 (491)
T 4aps_A          163 PLIVGAAQEAAGYHVAFSLAAIGMFIGLLVYYFG  196 (491)
T ss_dssp             HHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHh
Confidence            9999999998889999988777766666554443

>2xut_A Proton/peptide symporter family protein; transport protein, membrane protein, major facilitator super transporter; 3.62A {Shewanella oneidensis}

Probab=99.40  E-value=4.6e-12  Score=118.94  Aligned_cols=172  Identities=14%  Similarity=0.073  Sum_probs=116.0

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhC------CCccchhhHhhhhHHHHHHHHHHHHHHHHHH-HHcCCChhh
Q 021674          118 PPVWALIVSHFCHNWGTFILLTWMPTYYNQVLH------FNLTESGLFCVLPWLTMAFSANLGGWIADTL-VSKGLSVTT  190 (309)
Q Consensus       118 ~~~~~~~~~~~~~~~~~~~~~~wlp~~l~~~~g------~s~~~~g~~~~~~~~~~~ig~~~~G~l~dr~-~~r~~~~~~  190 (309)
                      +.+|.+....++...++|+...++|.|+++++|      +|..+.+.+.+...++..++.+++|+++||+ |||+     
T Consensus        12 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~~g~r~-----   86 (524)
T 2xut_A           12 RQIPYIIASEACERFSFYGMRNILTPFLMTALLLSIPEELRGAVAKDVFHSFVIGVYFFPLLGGWIADRFFGKYN-----   86 (524)
T ss_dssp             -CCTHHHHHHHHHHHHHHHHHHHHHHHHHHSCSSCCSSSTTTTTHHHHHHHHHHHHHHTHHHHHHHHTTSSCSHH-----
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchH-----
Confidence            455667777888888899999999999999999      9999999999999999999999999999999 8763     


Q ss_pred             HHHHHHHHhhHHHHHHHHHhhccC-chHHHHH-HHHHHHhhhhhhhcchhhhhhc-cCCCchHHHHHH---HhHhHhhhh
Q 021674          191 VRKIMQSIGFLGPAFFLTQLSHVD-SPAMAVL-CMACSQGTDAFSQSGLYSNHQD-IAPRYSGVLLGL---SNTAGVLAG  264 (309)
Q Consensus       191 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-~~~~~~g~a~~~---~~~~~~lgg  264 (309)
                         .+. .+.....+........+ +...... ....+.+.+.. .+...+...| .++++++.+.+.   .+...++|+
T Consensus        87 ---~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~-~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~g~  161 (524)
T 2xut_A           87 ---TIL-WLSLIYCVGHAFLAIFEHSVQGFYTGLFLIALGSGGI-KPLVSSFMGDQFDQSNKSLAQKAFDMFYFTINFGS  161 (524)
T ss_dssp             ---HHH-HHHHHHHHHHHHHHHTSSCHHHHHHHHHHHHHHHHTT-HHHHHHHHHHTCSTTTTTHHHHHHHHHHHHHHHHH
T ss_pred             ---HHH-HHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHhcccc-chhHHHHHHHHcCccchHHHHHHHHHHHHHHHHHH
Confidence               111 11211111111122223 3333222 22223322211 1222222233 355667655555   888899999


Q ss_pred             hHHHhHHHhhcccCCchHHHHHHHHHHHHHHHHHH
Q 021674          265 VFGTAATGYILQHGSWDDVFKVSVGLYLVGTAVWN  299 (309)
Q Consensus       265 ~i~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~  299 (309)
                      .++|.+.+.+.++.+|+..|.+.+++.+++.+.+.
T Consensus       162 ~~g~~~~~~l~~~~g~~~~f~~~~~~~~~~~~~~~  196 (524)
T 2xut_A          162 FFASLSMPLLLKNFGAAVAFGIPGVLMFVATVFFW  196 (524)
T ss_dssp             HHHHHTSTHHHHTSCHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999888899999887777766655543

>1pw4_A Glycerol-3-phosphate transporter; transmembrane, inner membrane, major facilitator superfamily, secondary active membrane transporter; 3.30A {Escherichia coli} SCOP: f.38.1.1

Probab=99.29  E-value=4.9e-11  Score=109.36  Aligned_cols=170  Identities=12%  Similarity=0.029  Sum_probs=108.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhHHHHHHHHhCCCccchhhHhhhhHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHh
Q 021674          120 VWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIG  199 (309)
Q Consensus       120 ~~~~~~~~~~~~~~~~~~~~wlp~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~~~  199 (309)
                      ++......++.....+.+...+|.+.++ + .|..+.+++.+...++..++.++.|+++||+|||+.        +. .+
T Consensus        30 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~r~~--------l~-~~   98 (451)
T 1pw4_A           30 FLGIFFGYAAYYLVRKNFALAMPYLVEQ-G-FSRGDLGFALSGISIAYGFSKFIMGSVSDRSNPRVF--------LP-AG   98 (451)
T ss_dssp             HHHHHHHHHHHHHHHTSHHHHHHHTTSS-T-TCSSCHHHHHHHHHHHHHHHHHHHHHHHHHSCHHHH--------HH-HH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHH-h-ccHhHHHHHHHHHHHHHHHHHHhHHHHHHhcCchHH--------HH-HH
Confidence            3444445555555555566777777655 5 999999999999999999999999999999998731        11 11


Q ss_pred             hHHHHHHHHHhhc----cCchHHH-HHHHHHHHhhhhhhhcchhhhhhcc-CCCchHHHHHHHhHhHhhhhhHHHhHHHh
Q 021674          200 FLGPAFFLTQLSH----VDSPAMA-VLCMACSQGTDAFSQSGLYSNHQDI-APRYSGVLLGLSNTAGVLAGVFGTAATGY  273 (309)
Q Consensus       200 ~~~~~~~~~~~~~----~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~a~~~~~~~~~lgg~i~~~~~g~  273 (309)
                      ....++.......    .++.... +.....+.+.+.. .+...+...|. ++++|+.+.++.+....+|..++|.+.+.
T Consensus        99 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~-~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~  177 (451)
T 1pw4_A           99 LILAAAVMLFMGFVPWATSSIAVMFVLLFLCGWFQGMG-WPPCGRTMVHWWSQKERGGIVSVWNCAHNVGGGIPPLLFLL  177 (451)
T ss_dssp             HHHHHHHHHHHHHCHHHHSSSSHHHHHHHHHHHHHHHT-HHHHHHHHHTTCTTTHHHHHHHHHHHHHHHHHTSHHHHHHH
T ss_pred             HHHHHHHHHHHHhhhhccccHHHHHHHHHHHHHHhhhc-cchHHHHHHHHCCchhhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence            1111111111111    2233222 2222233322211 12222333343 45789999999999999999999999999


Q ss_pred             hcccCC-chHHHHHHHHHHHHHHHHHHhh
Q 021674          274 ILQHGS-WDDVFKVSVGLYLVGTAVWNLF  301 (309)
Q Consensus       274 l~~~~~-~~~~~~~~~~~~~~~~~~~~~~  301 (309)
                      +.+..+ |+..|.+.+++.++..+...++
T Consensus       178 l~~~~g~w~~~f~~~~~~~~~~~~~~~~~  206 (451)
T 1pw4_A          178 GMAWFNDWHAALYMPAFCAILVALFAFAM  206 (451)
T ss_dssp             HHHHTCCSTTCTHHHHHHHHHHHHHHHHH
T ss_pred             HHHHhccHHHHHHHHHHHHHHHHHHHHhh
Confidence            888877 9999988777776665544444

>3o7q_A L-fucose-proton symporter; transporter, multi-PASS membrane protei transport protein; HET: BNG; 3.14A {Escherichia coli} PDB: 3o7p_A*

Probab=99.28  E-value=2.4e-10  Score=104.35  Aligned_cols=168  Identities=11%  Similarity=0.088  Sum_probs=106.2

Q ss_pred             HHHHHHHHHHHHHHHHHhHHHHHHHHhCCCccchhhHhhhhHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHhhHH
Q 021674          123 LIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLG  202 (309)
Q Consensus       123 ~~~~~~~~~~~~~~~~~wlp~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~~~~~~  202 (309)
                      ....+++...........+|. +++++|+|..+.+++.+...++..++.++.|+++||+|||+.        +. .+...
T Consensus        31 ~~~~~~~~~~~~~~~~~~~~~-~~~~~g~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~g~r~~--------l~-~~~~~  100 (438)
T 3o7q_A           31 LCSLFFLWAVANNLNDILLPQ-FQQAFTLTNFQAGLIQSAFYFGYFIIPIPAGILMKKLSYKAG--------II-TGLFL  100 (438)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHH-HHHHSCCCSHHHHHHHHHHHHHHHTTHHHHHHHHHHSCHHHH--------HH-HHHHH
T ss_pred             HHHHHHHHHHHHHhHHHHHHH-HHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhcchHH--------HH-HHHHH
Confidence            344444444445555566766 556789999999999999999999999999999999998731        11 11111


Q ss_pred             HHHHHHHh---hccCchHHHHHH-HHHHHhhhhhhhcchhhhhhc-cCCCchHHHHHHHhHhHhhhhhHHHhHHHhhc-c
Q 021674          203 PAFFLTQL---SHVDSPAMAVLC-MACSQGTDAFSQSGLYSNHQD-IAPRYSGVLLGLSNTAGVLAGVFGTAATGYIL-Q  276 (309)
Q Consensus       203 ~~~~~~~~---~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~-~~~~~~g~a~~~~~~~~~lgg~i~~~~~g~l~-~  276 (309)
                      .++.....   ...++....+.. ...+.+.+.. .+...+...| .++++|+.+.++.+....+|..++|.+.+.+. +
T Consensus       101 ~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~-~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~  179 (438)
T 3o7q_A          101 YALGAALFWPAAEIMNYTLFLVGLFIIAAGLGCL-ETAANPFVTVLGPESSGHFRLNLAQTFNSFGAIIAVVFGQSLILS  179 (438)
T ss_dssp             HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH-HHHHHHHHHHSSCSTTHHHHHHHHHHHHHHHHHHHHHHTTHHHHT
T ss_pred             HHHHHHHHHhccccccHHHHHHHHHHHHhhHHHh-hhhHHHHHHHHcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence            11111111   233344333222 2233332221 2222233333 45678999999999999999999999999998 5


Q ss_pred             cCC-------------------------chHHHHHHHHHHHHHHHHHHhh
Q 021674          277 HGS-------------------------WDDVFKVSVGLYLVGTAVWNLF  301 (309)
Q Consensus       277 ~~~-------------------------~~~~~~~~~~~~~~~~~~~~~~  301 (309)
                      ..+                         |+..|.+.+++.++..+.+.+.
T Consensus       180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~  229 (438)
T 3o7q_A          180 NVPHQSQDVLDKMSPEQLSAYKHSLVLSVQTPYMIIVAIVLLVALLIMLT  229 (438)
T ss_dssp             SSCCCCHHHHHHSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred             ccccccccccccCCcchhhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHH
Confidence            543                         8888877666655555444443

>2cfq_A Lactose permease; transport, transport mechanism, lactose/H+ symport, sugar transport, transmembrane, formylation; 2.95A {Escherichia coli} SCOP: f.38.1.2 PDB: 1pv7_A* 1pv6_A 2cfp_A 2v8n_A 2y5y_A*

Probab=99.16  E-value=2.1e-12  Score=118.16  Aligned_cols=172  Identities=14%  Similarity=0.186  Sum_probs=105.6

Q ss_pred             hhcchHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhCCCccchhhHhhhhHHHHHHHHHHHHHHHHHHHHcCCChhhHHH
Q 021674          114 ILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRK  193 (309)
Q Consensus       114 l~~~~~~~~~~~~~~~~~~~~~~~~~wlp~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~  193 (309)
                      ++|||++|......++....+.....++|.|+++++|+|+.+.|++.+...++..++.++.|+++||+|||+.....   
T Consensus         3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~g~~~~~~~~~~~i~~~~~G~lsDr~Grr~~l~~~---   79 (417)
T 2cfq_A            3 YLKNTNFWMFGLFFFFYFFIMGAYFPFFPIWLHDINHISKSDTGIIFAAISLFSLLFQPLFGLLSDKLGLRKYLLWI---   79 (417)
T ss_dssp             TTSCHHHHHHHHHHHHHHHHHHHHTTTHHHHHHTTTCCCTTTSHHHHHHHHHHHHHHHHHHHHHHTTSTTCCHHHHH---
T ss_pred             cccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHH---
Confidence            68999999888777777667777789999999988999999999999999999999999999999999987522110   


Q ss_pred             HHHHHhhHHHHHHHHHhh---ccCchHHHHHHHHHHHhhhhhhhcchhhhhhcc---CCCchHHHHHHHhHhHhhhhhHH
Q 021674          194 IMQSIGFLGPAFFLTQLS---HVDSPAMAVLCMACSQGTDAFSQSGLYSNHQDI---APRYSGVLLGLSNTAGVLAGVFG  267 (309)
Q Consensus       194 ~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~g~a~~~~~~~~~lgg~i~  267 (309)
                       .................   ..... ..  ....+...+ ...+.......+.   .++.++.+.+..+..+.+|..++
T Consensus        80 -~~~~~~~~~~~~~~~~~~~~~~~~~-~~--~~~~~~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~  154 (417)
T 2cfq_A           80 -ITGMLVMFAPFFIFIFGPLLQYNIL-VG--SIVGGIYLG-FCFNAGAPAVEAFIEKVSRRSNFEFGRARMFGCVGWALG  154 (417)
T ss_dssp             -HHHTTSCHHHHHHHTHHHHHHTTCC-HH--HHGGGSSTT-HHHHTTHHHHHHHHHHHHHHHTCCHHHHSSSTTTHHHHH
T ss_pred             -HHHHHHHHHHHHHHHHHHHHHHHHH-HH--HHHHHHHHH-HHHhhhHHHHHHHHHHhhhhcccchHHHHHHHHHHHHHH
Confidence             00000000011100000   00010 00  000000000 0000011111111   12345767788888889999999


Q ss_pred             HhHHHhhcccCCchHHHHHHHHHHHHH
Q 021674          268 TAATGYILQHGSWDDVFKVSVGLYLVG  294 (309)
Q Consensus       268 ~~~~g~l~~~~~~~~~~~~~~~~~~~~  294 (309)
                      |.+.+++.+. +|+..|++.+++.++.
T Consensus       155 ~~l~~~l~~~-~~~~~f~~~~~~~~~~  180 (417)
T 2cfq_A          155 ASIVGIMFTI-NNQFVFWLGSGCALIL  180 (417)
T ss_dssp             HHHHHHHHHH-CSHHHHTTTTTTTTTH
T ss_pred             HHHHHHHHHh-chhHHHHHHHHHHHHH
Confidence            9999999875 5888887655544333

>2gfp_A EMRD, multidrug resistance protein D; membrane protein, multidrug transporter; 3.50A {Escherichia coli}

Probab=99.13  E-value=1.3e-10  Score=104.24  Aligned_cols=163  Identities=12%  Similarity=0.015  Sum_probs=104.4

Q ss_pred             HHHHHHHHHHHHHHHHHhHHHHHHHHhCCCccchhhHhhhhHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHhhHH
Q 021674          123 LIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLG  202 (309)
Q Consensus       123 ~~~~~~~~~~~~~~~~~wlp~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~~~~~~  202 (309)
                      +....++...........+|.+. +++|.|..+.++..+...++..++.+..|+++||+|||+.....  .....+    
T Consensus         5 ~~~~~~~~~~~~~~~~~~~~~~~-~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~--~~~~~~----   77 (375)
T 2gfp_A            5 LVLLVAVGQMAQTIYIPAIADMA-RDLNVREGAVQSVMGAYLLTYGVSQLFYGPISDRVGRRPVILVG--MSIFML----   77 (375)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHH-TTSSSTTHHHHHHHHHHHHHHHHHHTTHHHHHTTSCCCCCCHHH--HHHHHH----
T ss_pred             HHHHHHHHHHHHHHHhhhhHHHH-HHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHH--HHHHHH----
Confidence            34445555555555666677654 56899999999999999999999999999999999987644321  011111    


Q ss_pred             HHHHHHHhhccCchHHHHH-HHHHHHhhhhhhhcchhhhhhc-cCCCchHHHHHHHhHhHhhhhhHHHhHHHhhcccCCc
Q 021674          203 PAFFLTQLSHVDSPAMAVL-CMACSQGTDAFSQSGLYSNHQD-IAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSW  280 (309)
Q Consensus       203 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-~~~~~~g~a~~~~~~~~~lgg~i~~~~~g~l~~~~~~  280 (309)
                      ..+...   ..++...... ....+.+.+.. .+...+...| .++++++.+.+..+....+|..++|.+.+.+.++.+|
T Consensus        78 ~~~~~~---~~~~~~~l~~~~~l~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~  153 (375)
T 2gfp_A           78 ATLVAV---TTSSLTVLIAASAMQGMGTGVG-GVMARTLPRDLYERTQLRHANSLLNMGILVSPLLAPLIGGLLDTMWNW  153 (375)
T ss_dssp             HHHHHH---HHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHTSSCCSHHHHHHHHHHHHHHHHHHHHHHSSCHHHH
T ss_pred             HHHHHH---HhccHHHHHHHHHHHHHHHHhh-hhhHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhccH
Confidence            111111   1112222222 22222222211 1112222223 3457889999999999999999999999999988789


Q ss_pred             hHHHHHHHHHHHHHHH
Q 021674          281 DDVFKVSVGLYLVGTA  296 (309)
Q Consensus       281 ~~~~~~~~~~~~~~~~  296 (309)
                      +..|.+.+++.++..+
T Consensus       154 ~~~~~~~~~~~~~~~~  169 (375)
T 2gfp_A          154 RACYLFLLVLCAGVTF  169 (375)
T ss_dssp             HHHHHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHHHHHHH
Confidence            9999887777766654

>4gc0_A D-xylose-proton symporter; MFS, transport protein; HET: 6BG BNG; 2.60A {Escherichia coli} PDB: 4gbz_A* 4gby_A*

Probab=98.13  E-value=6.1e-05  Score=69.45  Aligned_cols=113  Identities=10%  Similarity=0.071  Sum_probs=62.4

Q ss_pred             cchhhHhhhhHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHhhHHHHHHHHHhh------------------ccCc
Q 021674          154 TESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLS------------------HVDS  215 (309)
Q Consensus       154 ~~~g~~~~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------~~~~  215 (309)
                      .+.|++.+...++..+|+++.|+++||+|||+.        +. ++.+...+......                  ..++
T Consensus        55 ~~~g~~~s~~~~G~~iG~~~~G~laDr~GRk~~--------l~-~~~~l~~i~~i~~a~~~~~~~~~~~~~~~~~~~a~~  125 (491)
T 4gc0_A           55 SLLGFCVASALIGCIIGGALGGYCSNRFGRRDS--------LK-IAAVLFFISGVGSAWPELGFTSINPDNTVPVYLAGY  125 (491)
T ss_dssp             HHHHHHHHTHHHHHHHHHHHHHHHHHHTCHHHH--------HH-HHHHHHHHHHHHHHCTTTTTSCSSSSSSCCGGGGGC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHH--------HH-HHHHHHHHHHHHHHHHhhhhhhhcchhHHHHHHhhh
Confidence            345777788889999999999999999998731        11 11111111111001                  1122


Q ss_pred             hHHHHHH-HHHHHhhhhhhhcchhhhhhcc-CCCchHHHHHHHhHhHhhhhhHHHhHHHhhcc
Q 021674          216 PAMAVLC-MACSQGTDAFSQSGLYSNHQDI-APRYSGVLLGLSNTAGVLAGVFGTAATGYILQ  276 (309)
Q Consensus       216 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~a~~~~~~~~~lgg~i~~~~~g~l~~  276 (309)
                      ....++. +..+++.+.. .+.......|. +++.|+...+..+....+|..+++.+...+.+
T Consensus       126 ~~~l~~~R~l~G~g~G~~-~~~~~~~i~E~~p~~~rg~~~~~~~~~~~~g~~~~~~~~~~~~~  187 (491)
T 4gc0_A          126 VPEFVIYRIIGGIGVGLA-SMLSPMYIAELAPAHIRGKLVSFNQFAIIFGQLLVYCVNYFIAR  187 (491)
T ss_dssp             HHHHHHHHHHHHHHHHHH-HHHHHHHHHTTSCGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHHHHH-HHHHHHHHHhhCCHHhhhhhHHhhhhhhhhhhhhhhhcchhhcc
Confidence            2222222 2223333221 11112223344 55789999999888887777777766655544

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	309
d1pv7a_	417	f.38.1.2 (A:) Lactose permease {Escherichia coli [	0.002

>d1pv7a_ f.38.1.2 (A:) Lactose permease {Escherichia coli [TaxId: 562]} Length = 417

class: Membrane and cell surface proteins and peptides
fold: MFS general substrate transporter
superfamily: MFS general substrate transporter
family: LacY-like proton/sugar symporter
domain: Lactose permease
species: Escherichia coli [TaxId: 562]

 Score = 37.1 bits (84), Expect = 0.002
 Identities = 21/187 (11%), Positives = 56/187 (29%), Gaps = 2/187 (1%)

Query: 115 LSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLG 174
           L     W   +  F + +       + P + + + H + +++G+      L       L 
Sbjct: 4   LKNTNFWMFGLFFFFYFFIMGAYFPFFPIWLHDINHISKSDTGIIFAAISLFSLLFQPLF 63

Query: 175 GWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSPAMAVLCMACSQGTDAFSQ 234
           G ++D L  +   +  +      + F     F+       +  +  +      G    + 
Sbjct: 64  GLLSDKLGLRKYLLWII--TGMLVMFAPFFIFIFGPLLQYNILVGSIVGGIYLGFCFNAG 121

Query: 235 SGLYSNHQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSWDDVFKVSVGLYLVG 294
           +       +   R S    G +   G +    G +  G +    +    +  S    ++ 
Sbjct: 122 APAVEAFIEKVSRRSNFEFGRARMFGCVGWALGASIVGIMFTINNQFVFWLGSGCALILA 181

Query: 295 TAVWNLF 301
             ++   
Sbjct: 182 VLLFFAK 188

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	309
d1pw4a_	447	Glycerol-3-phosphate transporter {Escherichia coli	99.95
d1pv7a_	417	Lactose permease {Escherichia coli [TaxId: 562]}	99.69
d1pv7a_	417	Lactose permease {Escherichia coli [TaxId: 562]}	99.34
d1pw4a_	447	Glycerol-3-phosphate transporter {Escherichia coli	99.19

>d1pw4a_ f.38.1.1 (A:) Glycerol-3-phosphate transporter {Escherichia coli [TaxId: 562]}

class: Membrane and cell surface proteins and peptides
fold: MFS general substrate transporter
superfamily: MFS general substrate transporter
family: Glycerol-3-phosphate transporter
domain: Glycerol-3-phosphate transporter
species: Escherichia coli [TaxId: 562]

Probab=99.95  E-value=4.8e-27  Score=213.68  Aligned_cols=296  Identities=16%  Similarity=0.227  Sum_probs=197.3

Q ss_pred             CCcccccchhhHHHHHhccCCCcchhHHHHHHHhhhhhHHHHhhhhHHHHhhh-cCCcchhHhhhhHHHHHHHHHHhhcc
Q 021674            1 MGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHR-FGWPSVFYSFGSLGTVWFTVWLSKAH   79 (309)
Q Consensus         1 ~Gig~g~~~p~~~~~i~~~~p~~~rg~~~g~~~~~~~~g~~lg~~l~~~l~~~-~gWr~~F~i~~~~~~v~~~~~~~~~~   79 (309)
                      +|+++|...|...++++|++|+|||++++++++.+.++|..+++.+++.+.+. .+||+.|++.+.+.++..++.+...+
T Consensus       126 ~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~  205 (447)
T d1pw4a_         126 CGWFQGMGWPPCGRTMVHWWSQKERGGIVSVWNCAHNVGGGIPPLLFLLGMAWFNDWHAALYMPAFCAILVALFAFAMMR  205 (447)
T ss_dssp             HHHHHHHTHHHHHHHHHTTCTTTHHHHHHHHHHHHHHHHHTSHHHHHHHHHHHTCCSTTCTHHHHHHHHHHHHHHHHHCC
T ss_pred             HHHhhhhhhhHHHHHHHHHHHhhcccccccccccccchhhhhhhhhhhhHhhhhhcccccchhhhhhHHHHHHHHHHhcc
Confidence            36788899999999999999999999999999999999999999999887775 48999999988777665555555555


Q ss_pred             cCCCCCCCCCHHHH--HHH---HhccCCCCCCCCCChhHhhcchHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhCCCcc
Q 021674           80 SSPAEDPQLRPAEK--KLI---VSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLT  154 (309)
Q Consensus        80 ~~p~~~~~~~~~~~--~~~---~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~wlp~~l~~~~g~s~~  154 (309)
                      |.|++.+..+.+|.  +..   .++..++...+....+.++++|.+|......++.....++..+|.|.|+++.++++..
T Consensus       206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  285 (447)
T d1pw4a_         206 DTPQSCGLPPIEEYKNDYPDDYNEKAEQELTAKQIFMQYVLPNKLLWYIAIANVFVYLLRYGILDWSPTYLKEVKHFALD  285 (447)
T ss_dssp             CSSTTTCCCSCTTTCCC-------------CCTHHHHHHTSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHBTTBSCCCHH
T ss_pred             cchhhcccchhhhhhhhcccchhhccccccchhhHHHHHHHcCchHHHHHHHhhhhhhhhhcchhhhhhhcccccccccc
Confidence            55543321111110  000   0000001111122346678899999888888888888999999999999999999999


Q ss_pred             chhhHhhhhHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHhhHHHHHHHHHhhccCchHHHHHH-HHHHHhhhhhh
Q 021674          155 ESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSPAMAVLC-MACSQGTDAFS  233 (309)
Q Consensus       155 ~~g~~~~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~  233 (309)
                      +.+.......++..++.++.|+++||.++++....    ..........+.........++......+ ...+++.... 
T Consensus       286 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~-  360 (447)
T d1pw4a_         286 KSSWAYFLYEYAGIPGTLLCGWMSDKVFRGNRGAT----GVFFMTLVTIATIVYWMNPAGNPTVDMICMIVIGFLIYGP-  360 (447)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHTSTTCHHHH----HHHHHHHHHHHHHHTTSCCTTCHHHHHHHHHHHHHHHTHH-
T ss_pred             hhhhhhhcchhhhhhhhhhhhhhhhhccccccccc----cchhHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHHHHH-
Confidence            99999999999999999999999999986642111    11111111111111111122333333222 2222222111 


Q ss_pred             hcchhhhhhc-cCCCchHHHHHHHhHhHhhhh-hHHHhHHHhhcccCCchHHHHHHHHHHHHHHHHHHhh
Q 021674          234 QSGLYSNHQD-IAPRYSGVLLGLSNTAGVLAG-VFGTAATGYILQHGSWDDVFKVSVGLYLVGTAVWNLF  301 (309)
Q Consensus       234 ~~~~~~~~~~-~~~~~~g~a~~~~~~~~~lgg-~i~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~  301 (309)
                      .........| .+++.+|++.|+.|..+++++ .++|.+.|++.|+.+|...|.+..++.+++.+....+
T Consensus       361 ~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~~g~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~~~  430 (447)
T d1pw4a_         361 VMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFFGWDGGFMVMIGGSILAVILLIVV  430 (447)
T ss_dssp             HHHHHHHHHHTSCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHH
Confidence            1112222233 455679999999999998865 5679999999999889888877666666555444433

>d1pv7a_ f.38.1.2 (A:) Lactose permease {Escherichia coli [TaxId: 562]}

class: Membrane and cell surface proteins and peptides
fold: MFS general substrate transporter
superfamily: MFS general substrate transporter
family: LacY-like proton/sugar symporter
domain: Lactose permease
species: Escherichia coli [TaxId: 562]

Probab=99.69  E-value=8.7e-16  Score=135.69  Aligned_cols=285  Identities=11%  Similarity=0.034  Sum_probs=159.0

Q ss_pred             cccchhhHHHHHhccCC--CcchhHHHHHHHhhhhhHHHHhhhhHHHHhhhcCCcchhHhhhhHHHHHHHHHHhhcccCC
Q 021674            5 EGVAMPAMNNILSKWVP--VAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVWLSKAHSSP   82 (309)
Q Consensus         5 ~g~~~p~~~~~i~~~~p--~~~rg~~~g~~~~~~~~g~~lg~~l~~~l~~~~gWr~~F~i~~~~~~v~~~~~~~~~~~~p   82 (309)
                      .+...+.......+..+  .+++.+..+........+..+++.+++.+.+. +|+..+........+...+.....+++|
T Consensus       114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~  192 (417)
T d1pv7a_         114 LGFCFNAGAPAVEAFIEKVSRRSNFEFGRARMFGCVGWALGASIVGIMFTI-NNQFVFWLGSGCALILAVLLFFAKTDAP  192 (417)
T ss_dssp             GGGGGTTHHHHHHHHHHHHHHHHSCCHHHHHHHHHHHHHHHHHHHHHHHHH-CHHHHHHHHHHHHHHHHHHHHSSCCCSC
T ss_pred             ccccccchhhcccccccchhhhhHHHHHHHhhhhccccccccccccccccc-cccccccchhhHHHHHHHHHHHHhcccc
Confidence            33334444444444443  23456677888888889999999999988764 5666666555555444344444444444


Q ss_pred             CCCCCCCHHHHHHHHhccCCCCCCCCCChhHhhcchHHHHHHHHHHHHHHHHHHHHHhHHHHHH---HHhCCCccchhhH
Q 021674           83 AEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYN---QVLHFNLTESGLF  159 (309)
Q Consensus        83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~wlp~~l~---~~~g~s~~~~g~~  159 (309)
                      +++++ +++++       .++++.+.....+.++++..+.......+..........+.+.+..   +..+.+....+..
T Consensus       193 ~~~~~-~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  264 (417)
T d1pv7a_         193 SSATV-ANAVG-------ANHSAFSLKLALELFRQPKLWFLSLYVIGVSCTYDVFDQQFANFFTSFFATGEQGTRVFGYV  264 (417)
T ss_dssp             SSSCS-SHHHH-------SCCCCCCHHHHHHHTTSSHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSSSCHHHHHHHHHHH
T ss_pred             cchhh-hhhhh-------hhcccccccccccccccccccchhhhhHHHHHHHHhhhccccccccccccccccchhhhccc
Confidence            33221 11111       0111111112234455555554444433333333333333333332   2334445566777


Q ss_pred             hhhhHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHhhHHHHHHHHHhhccCchHHHHH-HHHHHHhhhhhhhcchh
Q 021674          160 CVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSPAMAVL-CMACSQGTDAFSQSGLY  238 (309)
Q Consensus       160 ~~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~  238 (309)
                      .....++..++..+.+++.||.++|+        .+ ..+..............++.+.... ....+.+.+.. .+...
T Consensus       265 ~~~~~~~~~~~~~~~~~l~~r~~~~~--------~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~-~~~~~  334 (417)
T d1pv7a_         265 TTMGELLNASIMFFAPLIINRIGGKN--------AL-LLAGTIMSVRIIGSSFATSALEVVILKTLHMFEVPFL-LVGCF  334 (417)
T ss_dssp             HHHHHHHHHHHHTTHHHHHHHHCHHH--------HH-HHHHHHHHHHHHHHHTCCCHHHHHHHHHHHHHHHHHH-HHHHH
T ss_pred             ccccccccccchhhhhhhhccccccc--------ch-hhhHHHHHHhhhccccccccchhhHHHHHHHHHHHHH-HHHHH
Confidence            77777888899999999999998652        11 1222222222222233344443322 22222222211 22222


Q ss_pred             hhhh-ccCCCchHHHHHHH-hHhHhhhhhHHHhHHHhhcccCCchHHHHHHHHHHHHHHHHHHhhcCCcccc
Q 021674          239 SNHQ-DIAPRYSGVLLGLS-NTAGVLAGVFGTAATGYILQHGSWDDVFKVSVGLYLVGTAVWNLFSTGEKVV  308 (309)
Q Consensus       239 ~~~~-~~~~~~~g~a~~~~-~~~~~lgg~i~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  308 (309)
                      .... ..+++.++.+.++. +....+|+.++|.+.|++.|+.|++..|.+.+++.+++.++..+..++++..
T Consensus       335 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~~~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~~~~  406 (417)
T d1pv7a_         335 KYITSQFEVRFSATIYLVCFCFFKQLAMIFMSVLAGNMYESIGFQGAYLVLGLVALGFTLISVFTLSGPGPL  406 (417)
T ss_dssp             HHHHHHSCGGGHHHHHHHHHTTTHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHSCCSSCT
T ss_pred             HHHHHHCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHhhcCCCcc
Confidence            3333 34567899999975 5566789999999999999998899999888888877777766766666543

>d1pv7a_ f.38.1.2 (A:) Lactose permease {Escherichia coli [TaxId: 562]}

class: Membrane and cell surface proteins and peptides
fold: MFS general substrate transporter
superfamily: MFS general substrate transporter
family: LacY-like proton/sugar symporter
domain: Lactose permease
species: Escherichia coli [TaxId: 562]

Probab=99.34  E-value=2.8e-12  Score=112.61  Aligned_cols=72  Identities=15%  Similarity=0.244  Sum_probs=66.6

Q ss_pred             hhcchHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhCCCccchhhHhhhhHHHHHHHHHHHHHHHHHHHHcC
Q 021674          114 ILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKG  185 (309)
Q Consensus       114 l~~~~~~~~~~~~~~~~~~~~~~~~~wlp~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~G~l~dr~~~r~  185 (309)
                      .+|||++|.+...+++...........+|.|++++.|+|..+.|++.+...++..++.++.|+++||+|||+
T Consensus         3 ~lkn~~~~~l~~~~f~~~~~~~~~~~~l~~~l~~~~g~s~~~~g~i~s~~~l~~~i~~~~~G~l~Dr~grr~   74 (417)
T d1pv7a_           3 YLKNTNFWMFGLFFFFYFFIMGAYFPFFPIWLHDINHISKSDTGIIFAAISLFSLLFQPLFGLLSDKLGLRK   74 (417)
T ss_dssp             HHHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHTTCT
T ss_pred             cccCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchH
Confidence            579999999998888888877778889999999999999999999999999999999999999999999875

>d1pw4a_ f.38.1.1 (A:) Glycerol-3-phosphate transporter {Escherichia coli [TaxId: 562]}

class: Membrane and cell surface proteins and peptides
fold: MFS general substrate transporter
superfamily: MFS general substrate transporter
family: Glycerol-3-phosphate transporter
domain: Glycerol-3-phosphate transporter
species: Escherichia coli [TaxId: 562]

Probab=99.19  E-value=2.4e-10  Score=101.98  Aligned_cols=152  Identities=13%  Similarity=0.052  Sum_probs=95.3

Q ss_pred             hHHHHHHHHhCCCccchhhHhhhhHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHhhHHHHHHHHHhh----ccCc
Q 021674          140 WMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLS----HVDS  215 (309)
Q Consensus       140 wlp~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~  215 (309)
                      ..-+++++ .|+|..+.|++.+...++..++.++.|+++||+|||+.        +. .+.+..........    ..++
T Consensus        46 ~~~p~~~~-~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~r~~--------~~-~~~~~~~~~~~~~~~~~~~~~~  115 (447)
T d1pw4a_          46 LAMPYLVE-QGFSRGDLGFALSGISIAYGFSKFIMGSVSDRSNPRVF--------LP-AGLILAAAVMLFMGFVPWATSS  115 (447)
T ss_dssp             HHHHHTTS-STTCSSCHHHHHHHHHHHHHHHHHHHHHHHHHSCHHHH--------HH-HHHHHHHHHHHHHHHCHHHHSS
T ss_pred             HHHHHHHH-hCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHH--------HH-HHHHHHHHHHhhccccchhhhh
Confidence            33346664 79999999999999999999999999999999998731        11 11111111111111    1112


Q ss_pred             hH-HHHHHHHHHHhhhhhhhcchhhhhh-ccCCCchHHHHHHHhHhHhhhhhHHHhHHHhhccc-CCchHHHHHHHHHHH
Q 021674          216 PA-MAVLCMACSQGTDAFSQSGLYSNHQ-DIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQH-GSWDDVFKVSVGLYL  292 (309)
Q Consensus       216 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~a~~~~~~~~~lgg~i~~~~~g~l~~~-~~~~~~~~~~~~~~~  292 (309)
                      .. ..+.....+.+.+.. .+....... ..++++|+.+.++.+....+|+.++|.+.+.+.+. .+|+..|.+.+.+.+
T Consensus       116 ~~~~~~~~~~~g~~~~~~-~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~~~~~~~~w~~~~~~~~~~~~  194 (447)
T d1pw4a_         116 IAVMFVLLFLCGWFQGMG-WPPCGRTMVHWWSQKERGGIVSVWNCAHNVGGGIPPLLFLLGMAWFNDWHAALYMPAFCAI  194 (447)
T ss_dssp             SSHHHHHHHHHHHHHHHT-HHHHHHHHHTTCTTTHHHHHHHHHHHHHHHHHTSHHHHHHHHHHHTCCSTTCTHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhhhhh-hhHHHHHHHHHHHhhcccccccccccccchhhhhhhhhhhhHhhhhhcccccchhhhhhHH
Confidence            22 222222223222211 122222223 34567899999999999999999999998887775 678888877666666


Q ss_pred             HHHHHHHhhc
Q 021674          293 VGTAVWNLFS  302 (309)
Q Consensus       293 ~~~~~~~~~~  302 (309)
                      +..+....+.
T Consensus       195 ~~~~~~~~~~  204 (447)
T d1pw4a_         195 LVALFAFAMM  204 (447)
T ss_dssp             HHHHHHHHHC
T ss_pred             HHHHHHHHhc
Confidence            5555545443