Citrus Sinensis ID: 021702

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------31
Protein Sequence
MPTSRYIYADELIDVLKKKHASGNYKSLVFYLEACESGSIFEGLLPEGLNIYATTASNAEESSWGTYCPGEIPGPPPEYSTCLGDLYSIAWMEDSDIHNLRTETLHQQYELVKTRTASYNSYGSHVMQYGDIGLSKNNLFTYLGTNPANDNYTFVDENSLRPASKAVNQRDADLLHFWDKYRKAPEGTPRKAEAQKQFFEAMSHRMHVDHSIKLIGKLLFGIEKGPEILNTVRPAGQPLVDDWGCLKSLVRTFESHCGALSQYGMKHMRSLANICNTGIGKEKMAEASAQACENIPSGPWSSLDKGFSA
Secondary Structure (PSIPRED)
ccccccccHHHHHHHHHHHHHcccccEEEEEEEEccccccccccccccccEEEEEccccccccccccccccccccccccccccccccccEEcccccccccccccHHHHHHHHHHHHccccccccccEEEcccccccccEEEEcccccccccccccccccccccccccccccHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccHHHHHHHHHHHHcccccHHHHHHHHHHHHHHcccccHHHHHHHHHHHcccccccccccccccccc
Secondary Structure Prediction (SSPRO)
ccccccccHHHHHHHHHHHHHcccccEEEEEEEEcccccHHccccccccEEEEEEcccccccccEEEcccccccccccccccccccEEHHHHHccccccccHHHHHHHHHHHHHHHccccccccEEEEEccccccHcHHHHHccccccccccccccccccccccccccccccHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHcccccccccccHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHcccccccccccccccccc
Coil and Loop (DISEMBL)
MPTSRYIYADELIDVLKKKHASGNYKSLVFYLEACesgsifegllpeglniyattasnaeesswgtycpgeipgpppeystclgdlysiawmedsdihnlrTETLHQQYELVKTRTAsynsygshvmqygdiglsknnlftylgtnpandnytfvdenslrpaskavnqrDADLLHFWDKyrkapegtprKAEAQKQFFEAMSHRMHVDHSIKLIGKLLFgiekgpeilntvrpagqplvddwgCLKSLVRTFESHCGALSQYGMKHMRSLANICNTGIGKEKMAEASAQacenipsgpwssldkgfsa
Flexible Loop (DISEMBL)
MPTSRYIYADELIDVLKKKHASGNYKSLVFYLEACESGSIFEGLLPEGLNIYATTASNAEESSWGTYCPGEIPGPPPEYSTCLGDLYSIAWMEDSDIHNLRTETLHQQYELVKTRTASYNSYGSHVMQYGDIGLSKNNLFTYLGTNPANDNYTFVDENSLRPASKAVNQRDADLLHFWDKYrkapegtpRKAEAQKQFFEAMSHRMHVDHSIKLIGKLLFGIEKGPEILNTVRPAGQPLVDDWGCLKSLVRTFESHCGALSQYGMKHMRSLANICNTGIGKEKMAEASAQAcenipsgpwssldkgfsa
Low Complexity Region (SEG)
MPTSRYIYADELIDVLKKKHASGNYKSLVFYLEACESGSIFEGLLPEGLNIYATTASNAEESSWGTYCPGEIPGPPPEYSTCLGDLYSIAWMEDSDIHNLRTETLHQQYELVKTRTASYNSYGSHVMQYGDIGLSKNNLFTYLGTNPANDNYTFVDENSLRPASKAVNQRDADLLHFWDKYRKAPEGTPRKAEAQKQFFEAMSHRMHVDHSIKLIGKLLFGIEKGPEILNTVRPAGQPLVDDWGCLKSLVRTFESHCGALSQYGMKHMRSLANICNTGIGKEKMAEASAQACENIPSGPWSSLDKGFSA
Disordered region (IsUnstruct)
*****YIYADELIDVLKKKHASGNYKSLVFYLEACESGSIFEGLLPEGLNIYATTASNAEESSWGTYCPGEIPGPPPEYSTCLGDLYSIAWMEDSDIHNLRTETLHQQYELVKTRTASYNSYGSHVMQYGDIGLSKNNLFTYLGTNPANDNYTFVDE************RDADLLHFWDKY****************FFEAMSHRMHVDHSIKLIGKLLFGIEKGPEILNTVRPAGQPLVDDWGCLKSLVRTFESHCGALSQYGMKHMRSLANICNTGIG*****************************
Disordered Region (DISOPRED)
***SRYIYADELIDVLKKKHASGNYKSLVFYLEACESGSIFEGLLPEGLNIYATTASNAEESSWGTYCPGEIPGPPPEYSTCLGDLYSIAWMEDSDIHNLRTETLHQQYELVKTRTASYNSYGSHVMQYGDIGLSKNNLFTYLGTNP***********************DADLLHFW*******************FFEAMSHRMHVDHSIKLIGKLLFG****************PLVDDWGCLKSLVRTFESHCGALSQYGMKHMRSLANICNTGIGKEKMAEASAQACENIPSGPWSS****F**
Disordered Region (DISEMBL)
MPTSRYIYADELIDVLKKKHASGNYKSLVFYLEACESGSIFEGLLPEGLNIYATTASNAEESSWGTYCPGEIPGPPPEYSTCLGDLYSIAWMEDSDIHNLRTETLHQQYELVKTRTASYNSYGSHVMQYGDIGLSKNNLFTYLGTNPANDNYTFVDENSLRPASKAVNQRDADLLHFWDKYRKA**********QKQFFEAMSHRMHVDHSIKLIGKLLFGIEKGPEILNTVRPAGQPLVDDWGCLKSLVRTFESHCGALSQYGMKHMRSLANICNTGIGKEKMAEASAQACENIPSGPW*********
Disordered Region (DISPRO)
***SRYIYADELIDVLKKKHASGNYKSLVFYLEACESGSIFEGLLPEGLNIYATTASNAEESSWGTYCPGEIPGPPPEYSTCLGDLYSIAWMEDSDIHNLRTETLHQQYELVKTRTASYNSYGSHVMQYGDIGLSKNNLFTYLGTNPA*DNYT**DENSLRPASKAVNQRDADLLHFWDKYRKAPEGTPRKAEAQKQFFEAMSHRMHVDHSIKLIGKLLFGIEKGPEILNTVRPAGQPLVDDWGCLKSLVRTFESHCGALSQYGMKHMRSLANICNTGIGKEKMAEASAQACENIPSG***********
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MPTSRYIYADELIDVLKKKHASGNYKSLVFYLEACESGSIFEGLLPEGLNIYATTASNAEESSWGTYCPGEIPGPPPEYSTCLGDLYSIAWMEDSDIHNLRTETLHQQYELVKTRTASYNSYGSHVMQYGDIGLSKNNLFTYLGTNPANDNYTFVDENSLRPASKAVNQRDADLLHFWDKYRKAPEGTPRKAEAQKQFFEAMSHRMHVDHSIKLIGKLLFGIEKGPEILNTVRPAGQPLVDDWGCLKSLVRTFESHCGALSQYGMKHMRSLANICNTGIGKEKMAEASAQACENIPSGPWSSLDKGFSA
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	309	2.2.26 [Sep-21-2011]
P49043	494	Vacuolar-processing enzym	no	no	1.0	0.625	0.996	0.0
O24325	484	Vacuolar-processing enzym	N/A	no	0.996	0.636	0.773	1e-144
Q39119	494	Vacuolar-processing enzym	yes	no	1.0	0.625	0.764	1e-138
P49044	493	Vacuolar-processing enzym	N/A	no	0.996	0.624	0.747	1e-135
P49047	478	Vacuolar-processing enzym	no	no	0.996	0.644	0.745	1e-132
P49042	497	Vacuolar-processing enzym	N/A	no	0.996	0.619	0.546	1e-100
P49045	495	Vacuolar-processing enzym	no	no	0.996	0.622	0.546	1e-100
P49046	475	Legumain OS=Canavalia ens	N/A	no	0.996	0.648	0.536	2e-96
Q39044	486	Vacuolar-processing enzym	no	no	0.935	0.594	0.568	2e-96
O24326	493	Vacuolar-processing enzym	N/A	no	0.996	0.624	0.543	1e-94

>sp|P49043|VPE_CITSI Vacuolar-processing enzyme OS=Citrus sinensis PE=2 SV=1

 Score =  646 bits (1667), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 308/309 (99%), Positives = 308/309 (99%)

Query: 1   MPTSRYIYADELIDVLKKKHASGNYKSLVFYLEACESGSIFEGLLPEGLNIYATTASNAE 60
           MPTSRYIYADELIDVLKKKHASGNYKSLVFYLEACESGSIFEGLL EGLNIYATTASNAE
Sbjct: 186 MPTSRYIYADELIDVLKKKHASGNYKSLVFYLEACESGSIFEGLLLEGLNIYATTASNAE 245

Query: 61  ESSWGTYCPGEIPGPPPEYSTCLGDLYSIAWMEDSDIHNLRTETLHQQYELVKTRTASYN 120
           ESSWGTYCPGEIPGPPPEYSTCLGDLYSIAWMEDSDIHNLRTETLHQQYELVKTRTASYN
Sbjct: 246 ESSWGTYCPGEIPGPPPEYSTCLGDLYSIAWMEDSDIHNLRTETLHQQYELVKTRTASYN 305

Query: 121 SYGSHVMQYGDIGLSKNNLFTYLGTNPANDNYTFVDENSLRPASKAVNQRDADLLHFWDK 180
           SYGSHVMQYGDIGLSKNNLFTYLGTNPANDNYTFVDENSLRPASKAVNQRDADLLHFWDK
Sbjct: 306 SYGSHVMQYGDIGLSKNNLFTYLGTNPANDNYTFVDENSLRPASKAVNQRDADLLHFWDK 365

Query: 181 YRKAPEGTPRKAEAQKQFFEAMSHRMHVDHSIKLIGKLLFGIEKGPEILNTVRPAGQPLV 240
           YRKAPEGTPRKAEAQKQFFEAMSHRMHVDHSIKLIGKLLFGIEKGPEILNTVRPAGQPLV
Sbjct: 366 YRKAPEGTPRKAEAQKQFFEAMSHRMHVDHSIKLIGKLLFGIEKGPEILNTVRPAGQPLV 425

Query: 241 DDWGCLKSLVRTFESHCGALSQYGMKHMRSLANICNTGIGKEKMAEASAQACENIPSGPW 300
           DDWGCLKSLVRTFESHCGALSQYGMKHMRSLANICNTGIGKEKMAEASAQACENIPSGPW
Sbjct: 426 DDWGCLKSLVRTFESHCGALSQYGMKHMRSLANICNTGIGKEKMAEASAQACENIPSGPW 485

Query: 301 SSLDKGFSA 309
           SSLDKGFSA
Sbjct: 486 SSLDKGFSA 494

Asparagine-specific endopeptidase that may be involved in processing of proteins targeted to vacuoles that accumulate during ethylene-regulated processes such as flower opening and flavedo degreening.
Citrus sinensis (taxid: 2711)
EC: 3EC: .EC: 4EC: .EC: 2EC: 2EC: .EC: -

>sp|O24325|VPE1_PHAVU Vacuolar-processing enzyme OS=Phaseolus vulgaris PE=1 SV=1

 Score =  511 bits (1317), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 239/309 (77%), Positives = 270/309 (87%), Gaps = 1/309 (0%)

Query: 2   PTSRYIYADELIDVLKKKHASGNYKSLVFYLEACESGSIFEGLLPEGLNIYATTASNAEE 61
           P   YIYA +L +VLKKKHASG YK+LVFYLEACESGSIFEGLLPE +N+YATTASNA+E
Sbjct: 176 PAGPYIYASDLNEVLKKKHASGTYKNLVFYLEACESGSIFEGLLPEDINVYATTASNADE 235

Query: 62  SSWGTYCPGEIPGPPPEYSTCLGDLYSIAWMEDSDIHNLRTETLHQQYELVKTRTASYN- 120
           SSWGTYCPGE P PPPEYSTCLGDLYS+AWMEDSD HNLRTETLHQQY+LVK RT S   
Sbjct: 236 SSWGTYCPGEDPSPPPEYSTCLGDLYSVAWMEDSDRHNLRTETLHQQYKLVKERTISGGL 295

Query: 121 SYGSHVMQYGDIGLSKNNLFTYLGTNPANDNYTFVDENSLRPASKAVNQRDADLLHFWDK 180
            YGSHVMQYGD+GLSK+ LF YLGT+PAN+N TFVDENSL  +SKAVNQRDADL+HFWDK
Sbjct: 296 YYGSHVMQYGDVGLSKDILFHYLGTDPANENLTFVDENSLWSSSKAVNQRDADLVHFWDK 355

Query: 181 YRKAPEGTPRKAEAQKQFFEAMSHRMHVDHSIKLIGKLLFGIEKGPEILNTVRPAGQPLV 240
           +RKAPEG+P+K EA+KQ  E MSHRMH+D S++L+GKLLFGIEK PE+LN VRPAG  LV
Sbjct: 356 FRKAPEGSPKKNEARKQVLEVMSHRMHIDDSVELVGKLLFGIEKAPELLNAVRPAGSALV 415

Query: 241 DDWGCLKSLVRTFESHCGALSQYGMKHMRSLANICNTGIGKEKMAEASAQACENIPSGPW 300
           DDW CLK++VRTFE+HCG+LSQYGMKHMRS AN+CN GI KE+M EASAQAC  IP+ PW
Sbjct: 416 DDWDCLKTMVRTFETHCGSLSQYGMKHMRSFANMCNVGIKKEQMREASAQACVTIPANPW 475

Query: 301 SSLDKGFSA 309
           SSL +GFSA
Sbjct: 476 SSLQRGFSA 484

Asparagine-specific endopeptidase. Probably involved in the degradation of phaseolin during and after germination.

Phaseolus vulgaris (taxid: 3885)

EC: 3

EC: .

EC: 4

EC: .

EC: 2

EC: 2

EC: .

EC: -

>sp|Q39119|VPEG_ARATH Vacuolar-processing enzyme gamma-isozyme OS=Arabidopsis thaliana GN=At4g32940 PE=2 SV=2

 Score =  491 bits (1265), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 237/310 (76%), Positives = 271/310 (87%), Gaps = 1/310 (0%)

Query: 1   MPTSRYIYADELIDVLKKKHASGNYKSLVFYLEACESGSIFEGLLPEGLNIYATTASNAE 60
           MPTS Y+YA++L DVLKKKHA G YKSLVFYLEACESGSIFEGLLPEGLNIYATTASNAE
Sbjct: 185 MPTSPYLYANDLNDVLKKKHALGTYKSLVFYLEACESGSIFEGLLPEGLNIYATTASNAE 244

Query: 61  ESSWGTYCPGEIPGPPPEYSTCLGDLYSIAWMEDSDIHNLRTETLHQQYELVKTRTASYN 120
           ESSWGTYCPGE P PPPEY TCLGDLYS+AWMEDS +HNL+TETLHQQYELVK RTA   
Sbjct: 245 ESSWGTYCPGEEPSPPPEYETCLGDLYSVAWMEDSGMHNLQTETLHQQYELVKRRTAPVG 304

Query: 121 -SYGSHVMQYGDIGLSKNNLFTYLGTNPANDNYTFVDENSLRPASKAVNQRDADLLHFWD 179
            SYGSHVMQYGD+G+SK+NL  Y+GTNPANDN+TF D NSL+P S+  NQRDADL+HFW+
Sbjct: 305 YSYGSHVMQYGDVGISKDNLDLYMGTNPANDNFTFADANSLKPPSRVTNQRDADLVHFWE 364

Query: 180 KYRKAPEGTPRKAEAQKQFFEAMSHRMHVDHSIKLIGKLLFGIEKGPEILNTVRPAGQPL 239
           KYRKAPEG+ RK EAQKQ  EAMSHR+H+D+S+ L+GK+LFGI +GPE+LN VR AGQPL
Sbjct: 365 KYRKAPEGSARKTEAQKQVLEAMSHRLHIDNSVILVGKILFGISRGPEVLNKVRSAGQPL 424

Query: 240 VDDWGCLKSLVRTFESHCGALSQYGMKHMRSLANICNTGIGKEKMAEASAQACENIPSGP 299
           VDDW CLK+ VR FE HCG+LSQYG+KHMRS ANICN GI  E+M EA++QAC  +P+GP
Sbjct: 425 VDDWNCLKNQVRAFERHCGSLSQYGIKHMRSFANICNAGIQMEQMEEAASQACTTLPTGP 484

Query: 300 WSSLDKGFSA 309
           WSSL++GFSA
Sbjct: 485 WSSLNRGFSA 494

Asparagine-specific endopeptidase involved in the processing of vacuolar seed protein precursors into the mature forms.

Arabidopsis thaliana (taxid: 3702)

EC: 3

EC: .

EC: 4

EC: .

EC: 2

EC: 2

EC: .

EC: -

>sp|P49044|VPE_VICSA Vacuolar-processing enzyme OS=Vicia sativa PE=1 SV=1

 Score =  482 bits (1240), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 234/313 (74%), Positives = 268/313 (85%), Gaps = 5/313 (1%)

Query: 1   MPTSRYIYADELIDVLKKKHASGNYKSLVFYLEACESGSIFEGLLPEGLNIYATTASNAE 60
           MP   Y+YA +L +VLKKKHASG YKSLVFYLEACESGSIFEGLLP+ LNIYATTASNAE
Sbjct: 182 MPVGPYLYASDLNEVLKKKHASGTYKSLVFYLEACESGSIFEGLLPDDLNIYATTASNAE 241

Query: 61  ESSWGTYCPGEIPGPPPEYSTCLGDLYSIAWMEDSDIHNLRTETLHQQYELVKTRTASYN 120
           ESSWG YCPG+ P PPPEYSTCLGDLYSIAWMEDS++HNL+TE+L QQY+LVK RT S  
Sbjct: 242 ESSWGYYCPGDKPPPPPEYSTCLGDLYSIAWMEDSEVHNLQTESLQQQYKLVKNRTIS-E 300

Query: 121 SYGSHVMQYGDIGLSKNNLFTYLGTNPANDNYTFVDEN----SLRPASKAVNQRDADLLH 176
            YGSHVM+YGDIGLSKN+L+ YLGTNPANDN +FVDE      LR  S AVNQRDADL+H
Sbjct: 301 PYGSHVMEYGDIGLSKNDLYQYLGTNPANDNNSFVDETENSLKLRTPSAAVNQRDADLIH 360

Query: 177 FWDKYRKAPEGTPRKAEAQKQFFEAMSHRMHVDHSIKLIGKLLFGIEKGPEILNTVRPAG 236
           FW+K+RKAPEG+ +K EA+KQ  EAMSHR H+D+S+KLIG+LLFGIEKG E+L+ VRPAG
Sbjct: 361 FWEKFRKAPEGSSQKNEAEKQVLEAMSHRKHIDNSVKLIGQLLFGIEKGTELLDVVRPAG 420

Query: 237 QPLVDDWGCLKSLVRTFESHCGALSQYGMKHMRSLANICNTGIGKEKMAEASAQACENIP 296
            PLVD+W CLK++V+TFE+HCG+LSQYGMKHMRS ANICN GI  E MAEASAQAC +IP
Sbjct: 421 SPLVDNWDCLKTMVKTFETHCGSLSQYGMKHMRSFANICNAGIPNEPMAEASAQACASIP 480

Query: 297 SGPWSSLDKGFSA 309
           + PWSSL  GFSA
Sbjct: 481 ANPWSSLQGGFSA 493

Asparagine-specific endopeptidase involved in the processing of vacuolar seed protein precursors into the mature forms.

Vicia sativa (taxid: 3908)

EC: 3

EC: .

EC: 4

EC: .

EC: 2

EC: 2

EC: .

EC: -

>sp|P49047|VPEA_ARATH Vacuolar-processing enzyme alpha-isozyme OS=Arabidopsis thaliana GN=At2g25940 PE=2 SV=2

 Score =  472 bits (1214), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 231/310 (74%), Positives = 267/310 (86%), Gaps = 2/310 (0%)

Query: 1   MPTSRYIYADELIDVLKKKHASGNYKSLVFYLEACESGSIFEGLLPEGLNIYATTASNAE 60
           MPTS  +YA++L DVLKKK+ASG YKSLVFYLEACESGSIFEGLLPEGLNIYATTASNAE
Sbjct: 170 MPTSPNLYANDLNDVLKKKYASGTYKSLVFYLEACESGSIFEGLLPEGLNIYATTASNAE 229

Query: 61  ESSWGTYCPGEIPGPPPEYSTCLGDLYSIAWMEDSDIHNLRTETLHQQYELVKTRTA-SY 119
           ESSWGTYCPGE P PP EY TCLGDLYS+AW+EDS+ HNL+TETLH+QYELVK RTA S 
Sbjct: 230 ESSWGTYCPGEDPSPPSEYETCLGDLYSVAWIEDSEKHNLQTETLHEQYELVKKRTAGSG 289

Query: 120 NSYGSHVMQYGDIGLSKNNLFTYLGTNPANDNYTFVDENSLRPASKAVNQRDADLLHFWD 179
            SYGSHVM++GDIGLSK  L  ++GTNPA++N+TFV+ENS+RP S+  NQRDADL+HFW 
Sbjct: 290 KSYGSHVMEFGDIGLSKEKLVLFMGTNPADENFTFVNENSIRPPSRVTNQRDADLVHFWH 349

Query: 180 KYRKAPEGTPRKAEAQKQFFEAMSHRMHVDHSIKLIGKLLFGIEKGPEILNTVRPAGQPL 239
           KY+KAPEG+ RK EAQKQ  EAMSHR+HVD+SI LIG LLFG+E G  +LN VRP+G+PL
Sbjct: 350 KYQKAPEGSARKVEAQKQVLEAMSHRLHVDNSILLIGILLFGLE-GHAVLNKVRPSGEPL 408

Query: 240 VDDWGCLKSLVRTFESHCGALSQYGMKHMRSLANICNTGIGKEKMAEASAQACENIPSGP 299
           VDDW CLKSLVR FE HCG+LSQYG+KHMRS+AN+CN GI   +M EA+ QAC  IP+ P
Sbjct: 409 VDDWDCLKSLVRAFERHCGSLSQYGIKHMRSIANMCNAGIQMRQMEEAAMQACPTIPTSP 468

Query: 300 WSSLDKGFSA 309
           WSSLD+GFSA
Sbjct: 469 WSSLDRGFSA 478

Asparagine-specific endopeptidase involved in the processing of vacuolar seed protein precursors into the mature forms.

Arabidopsis thaliana (taxid: 3702)

EC: 3

EC: .

EC: 4

EC: .

EC: 2

EC: 2

EC: .

EC: -

>sp|P49042|VPE_RICCO Vacuolar-processing enzyme OS=Ricinus communis PE=1 SV=1

 Score =  365 bits (937), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 170/311 (54%), Positives = 225/311 (72%), Gaps = 3/311 (0%)

Query: 1   MPTSRYIYADELIDVLKKKHASGNYKSLVFYLEACESGSIFEGLLPEGLNIYATTASNAE 60
           MP   Y+YA + I+VLKKKHA+G YK +V Y+EACESGSIFEG++P+ ++IY TTASNA+
Sbjct: 188 MPNLPYLYAMDFIEVLKKKHAAGGYKKMVIYVEACESGSIFEGIMPKDVDIYVTTASNAQ 247

Query: 61  ESSWGTYCPGEIPGPPPEYSTCLGDLYSIAWMEDSDIHNLRTETLHQQYELVKTRTASYN 120
           ESSWGTYCPG  P PPPE++TCLGDLYS+AWMEDS+ HNL+ ET+ QQY  VK RT++YN
Sbjct: 248 ESSWGTYCPGMEPSPPPEFTTCLGDLYSVAWMEDSESHNLKKETVKQQYSSVKARTSNYN 307

Query: 121 SY--GSHVMQYGDIGLSKNNLFTYLGTNPANDNYTFVDENSLRPASKAVNQRDADLLHFW 178
           +Y  GSHVMQYG+  +  + L+ + G +PA+ N+   +   L    + VNQRDA+L   W
Sbjct: 308 TYAAGSHVMQYGNQSIKADKLYLFQGFDPASVNFP-PNNAHLNAPMEVVNQRDAELHFMW 366

Query: 179 DKYRKAPEGTPRKAEAQKQFFEAMSHRMHVDHSIKLIGKLLFGIEKGPEILNTVRPAGQP 238
             Y+++  G+ +K E  +Q  +A+ HR H+D S++LIG LLFG +K   IL +VR  G P
Sbjct: 367 QLYKRSENGSEKKKEILQQIKDAIKHRSHLDSSMQLIGDLLFGPKKASAILKSVREPGSP 426

Query: 239 LVDDWGCLKSLVRTFESHCGALSQYGMKHMRSLANICNTGIGKEKMAEASAQACENIPSG 298
           LVDDWGCLKS+VR FE+ CG+L+QYGMKHMR+ ANICN G+    M EA   AC    +G
Sbjct: 427 LVDDWGCLKSMVRVFETCCGSLTQYGMKHMRTFANICNAGVSHTSMEEACNAACSGHDAG 486

Query: 299 PWSSLDKGFSA 309
            W   ++G+SA
Sbjct: 487 QWHPTNQGYSA 497

Asparagine-specific endopeptidase involved in the processing of vacuolar seed protein precursors into the mature forms.

Ricinus communis (taxid: 3988)

EC: 3

EC: .

EC: 4

EC: .

EC: 2

EC: 2

EC: .

EC: -

>sp|P49045|VPE_SOYBN Vacuolar-processing enzyme OS=Glycine max PE=2 SV=1

 Score =  365 bits (937), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 170/311 (54%), Positives = 222/311 (71%), Gaps = 3/311 (0%)

Query: 1   MPTSRYIYADELIDVLKKKHASGNYKSLVFYLEACESGSIFEGLLPEGLNIYATTASNAE 60
           MP   Y+YA + IDVLKKKHASG+YK +V Y+EACESGS+FEG++P+ LNIY TTASNA+
Sbjct: 186 MPNMPYLYAMDFIDVLKKKHASGSYKEMVIYVEACESGSVFEGIMPKDLNIYVTTASNAQ 245

Query: 61  ESSWGTYCPGEIPGPPPEYSTCLGDLYSIAWMEDSDIHNLRTETLHQQYELVKTRTASYN 120
           E+SWGTYCPG  P PPPEY TCLGDLYS+AWMEDS+ HNL+ E++ QQY+ VK RT+++N
Sbjct: 246 ENSWGTYCPGMDPSPPPEYITCLGDLYSVAWMEDSEAHNLKRESVKQQYKSVKQRTSNFN 305

Query: 121 SY--GSHVMQYGDIGLSKNNLFTYLGTNPANDNYTFVDENSLRPASKAVNQRDADLLHFW 178
           +Y  GSHVMQYGD  ++   L+ Y G +PA  N+       L    + VNQRDA+L   W
Sbjct: 306 NYAMGSHVMQYGDTNITAEKLYLYQGFDPATVNFP-PQNGRLETKMEVVNQRDAELFLLW 364

Query: 179 DKYRKAPEGTPRKAEAQKQFFEAMSHRMHVDHSIKLIGKLLFGIEKGPEILNTVRPAGQP 238
             Y+++   +  K +  KQ  E + HR H+D S++LIG LL+G  KG  +L +VR  G  
Sbjct: 365 QMYQRSNHQSENKTDILKQIAETVKHRKHIDGSVELIGVLLYGPGKGSSVLQSVRAPGSS 424

Query: 239 LVDDWGCLKSLVRTFESHCGALSQYGMKHMRSLANICNTGIGKEKMAEASAQACENIPSG 298
           LVDDW CLKS+VR FE+HCG L+QYGMKHMR+ ANICN+G+ +  M EA   ACE   +G
Sbjct: 425 LVDDWTCLKSMVRVFETHCGTLTQYGMKHMRAFANICNSGVSEASMEEACLAACEGYNAG 484

Query: 299 PWSSLDKGFSA 309
            +   ++G+SA
Sbjct: 485 LFHPSNRGYSA 495

Asparagine-specific endopeptidase involved in the processing of vacuolar seed protein precursors into the mature forms.

Glycine max (taxid: 3847)

EC: 3

EC: .

EC: 4

EC: .

EC: 2

EC: 2

EC: .

EC: -

>sp|P49046|LEGU_CANEN Legumain OS=Canavalia ensiformis PE=1 SV=1

 Score =  352 bits (903), Expect = 2e-96,   Method: Compositional matrix adjust.
 Identities = 167/311 (53%), Positives = 220/311 (70%), Gaps = 3/311 (0%)

Query: 1   MPTSRYIYADELIDVLKKKHASGNYKSLVFYLEACESGSIFEGLLPEGLNIYATTASNAE 60
           MP + ++YA + IDVLKKKHASG YK +V Y+EACESGSIFEG++P+ LNIY TTASNA+
Sbjct: 166 MPNAPFVYAMDFIDVLKKKHASGGYKEMVIYIEACESGSIFEGIMPKDLNIYVTTASNAQ 225

Query: 61  ESSWGTYCPGEIPGPPPEYSTCLGDLYSIAWMEDSDIHNLRTETLHQQYELVKTRTASYN 120
           E+S+GTYCPG  P PP EY TCLGDLYS++WMEDS+ HNL+ ET+ QQY+ V+ RT++ N
Sbjct: 226 ENSFGTYCPGMNPPPPEEYVTCLGDLYSVSWMEDSETHNLKRETVQQQYQSVRKRTSNSN 285

Query: 121 SY--GSHVMQYGDIGLSKNNLFTYLGTNPANDNYTFVDENSLRPASKAVNQRDADLLHFW 178
           SY  GSHVMQYGD  ++   L+ Y G +PA  N+   + N L    + VNQRDA+LL  W
Sbjct: 286 SYRFGSHVMQYGDTNITAEKLYLYHGFDPATVNFPPHNGN-LEAKMEVVNQRDAELLFMW 344

Query: 179 DKYRKAPEGTPRKAEAQKQFFEAMSHRMHVDHSIKLIGKLLFGIEKGPEILNTVRPAGQP 238
             Y+++     +K    +Q  E + HR H+D S++LIG LL+G  K   +L++VR  G P
Sbjct: 345 QMYQRSNHQPEKKTHILEQITETVKHRNHLDGSVELIGVLLYGPGKSSSVLHSVRAPGLP 404

Query: 239 LVDDWGCLKSLVRTFESHCGALSQYGMKHMRSLANICNTGIGKEKMAEASAQACENIPSG 298
           LVDDW CLKS+VR FE+HCG+L+QYGMKHMR+  N+CN+G+ K  M EA   AC    +G
Sbjct: 405 LVDDWTCLKSMVRVFETHCGSLTQYGMKHMRAFGNVCNSGVSKASMEEACKAACGGYDAG 464

Query: 299 PWSSLDKGFSA 309
                + G+SA
Sbjct: 465 LLYPSNTGYSA 475

Canavalia ensiformis (taxid: 3823)

EC: 3

EC: .

EC: 4

EC: .

EC: 2

EC: 2

EC: .

EC: 3

EC: 4

>sp|Q39044|VPEB_ARATH Vacuolar-processing enzyme beta-isozyme OS=Arabidopsis thaliana GN=At1g62710 PE=2 SV=3

 Score =  352 bits (903), Expect = 2e-96,   Method: Compositional matrix adjust.
 Identities = 167/294 (56%), Positives = 211/294 (71%), Gaps = 5/294 (1%)

Query: 1   MPTSRYIYADELIDVLKKKHASGNYKSLVFYLEACESGSIFEGLLPEGLNIYATTASNAE 60
           MP + +IYA + I+ LKKKHASG YK +V Y+EACESGSIFEG++P+ LNIY TTASNA+
Sbjct: 177 MPNTPHIYAADFIETLKKKHASGTYKEMVIYVEACESGSIFEGIMPKDLNIYVTTASNAQ 236

Query: 61  ESSWGTYCPGEIPGPPPEYSTCLGDLYSIAWMEDSDIHNLRTETLHQQYELVKTRTASYN 120
           ESS+GTYCPG  P PP EY TCLGDLYS+AWMEDS+ HNL+ ET+ QQY  VK RT++YN
Sbjct: 237 ESSYGTYCPGMNPSPPSEYITCLGDLYSVAWMEDSETHNLKKETIKQQYHTVKMRTSNYN 296

Query: 121 SY--GSHVMQYGDIGLSKNNLFTYLGTNPANDNYTFVDENSLRPASKAVNQRDADLLHFW 178
           +Y  GSHVM+YG+  +    L+ Y G +PA  N   ++E  ++     VNQRDADLL  W
Sbjct: 297 TYSGGSHVMEYGNNSIKSEKLYLYQGFDPATVNLP-LNELPVKSKIGVVNQRDADLLFLW 355

Query: 179 DKYRKAPEGTPRKAEAQKQFFEAMSHRMHVDHSIKLIGKLLFGIEKGPEILNTVRPAGQP 238
             YR + +G+ +K +  K+  E   HR H+D S++LI  +LFG      +LN VR  G P
Sbjct: 356 HMYRTSEDGSRKKDDTLKELTETTRHRKHLDASVELIATILFGPTM--NVLNLVREPGLP 413

Query: 239 LVDDWGCLKSLVRTFESHCGALSQYGMKHMRSLANICNTGIGKEKMAEASAQAC 292
           LVDDW CLKS+VR FE HCG+L+QYGMKHMR+ AN+CN G+ KE M EAS  AC
Sbjct: 414 LVDDWECLKSMVRVFEEHCGSLTQYGMKHMRAFANVCNNGVSKELMEEASTAAC 467

Asparagine-specific endopeptidase involved in the processing of vacuolar seed protein precursors into the mature forms.

Arabidopsis thaliana (taxid: 3702)

EC: 3

EC: .

EC: 4

EC: .

EC: 2

EC: 2

EC: .

EC: -

>sp|O24326|VPE2_PHAVU Vacuolar-processing enzyme OS=Phaseolus vulgaris PE=2 SV=1

 Score =  346 bits (888), Expect = 1e-94,   Method: Compositional matrix adjust.
 Identities = 169/311 (54%), Positives = 221/311 (71%), Gaps = 3/311 (0%)

Query: 1   MPTSRYIYADELIDVLKKKHASGNYKSLVFYLEACESGSIFEGLLPEGLNIYATTASNAE 60
           MP   Y+YA + IDVLKKKHASG YK +V Y+EACESGSIFEG++P+ LNIY TTASNA+
Sbjct: 184 MPNMPYLYAMDFIDVLKKKHASGGYKEMVIYVEACESGSIFEGIMPKDLNIYVTTASNAQ 243

Query: 61  ESSWGTYCPGEIPGPPPEYSTCLGDLYSIAWMEDSDIHNLRTETLHQQYELVKTRTASYN 120
           E+SWGTYCPG  P PPPEY TCLGDLYS+AWMEDS+ HNL+ E++ QQY+ VK RT+++ 
Sbjct: 244 ENSWGTYCPGMYPPPPPEYITCLGDLYSVAWMEDSESHNLKKESVEQQYQSVKQRTSNFE 303

Query: 121 SY--GSHVMQYGDIGLSKNNLFTYLGTNPANDNYTFVDENSLRPASKAVNQRDADLLHFW 178
           +Y  GSHVMQYGD  ++   L+ Y G +PA  N+       L+   + VNQRDA+LL  W
Sbjct: 304 AYAMGSHVMQYGDANMTAEKLYLYHGFDPATVNFP-PHNGRLKSKMEVVNQRDAELLFMW 362

Query: 179 DKYRKAPEGTPRKAEAQKQFFEAMSHRMHVDHSIKLIGKLLFGIEKGPEILNTVRPAGQP 238
             Y+++     +K +  KQ  E + HR H+D S++LIG LL+G EK   +L +VR  G P
Sbjct: 363 QVYQRSNHLPEKKTDILKQIEEIVKHRKHLDGSVELIGVLLYGPEKASSVLRSVRTTGLP 422

Query: 239 LVDDWGCLKSLVRTFESHCGALSQYGMKHMRSLANICNTGIGKEKMAEASAQACENIPSG 298
           LVDDW CLKS+VR +E+HCG+L+QYGMKHMR+ ANICN+G+ +  M +A   AC    +G
Sbjct: 423 LVDDWTCLKSMVRVYETHCGSLTQYGMKHMRAFANICNSGVSETSMEKACVAACGGYHAG 482

Query: 299 PWSSLDKGFSA 309
                + G+SA
Sbjct: 483 LLHPSNTGYSA 493

Asparagine-specific endopeptidase involved in the processing of vacuolar seed protein precursors into the mature forms.

Phaseolus vulgaris (taxid: 3885)

EC: 3

EC: .

EC: 4

EC: .

EC: 2

EC: 2

EC: .

EC: -

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	309
1351408	494	RecName: Full=Vacuolar-processing enzyme	1.0	0.625	0.996	0.0
224141591	489	predicted protein [Populus trichocarpa]	1.0	0.631	0.841	1e-158
233142300	493	vacuolar processing enzyme a [Populus to	1.0	0.626	0.841	1e-156
224088921	493	predicted protein [Populus trichocarpa]	1.0	0.626	0.848	1e-156
255550848	492	Vacuolar-processing enzyme precursor, pu	1.0	0.628	0.835	1e-156
225429442	493	PREDICTED: vacuolar-processing enzyme [V	1.0	0.626	0.829	1e-155
147799465	493	hypothetical protein VITISV_040193 [Viti	1.0	0.626	0.829	1e-154
237861979	494	vacuolar processing enzyme [Malus hupehe	1.0	0.625	0.816	1e-154
356514571	484	PREDICTED: vacuolar-processing enzyme-li	1.0	0.638	0.816	1e-151
34530959	483	unnamed protein product [Homo sapiens]	1.0	0.639	0.809	1e-149

>gi|1351408|sp|P49043.1|VPE_CITSI RecName: Full=Vacuolar-processing enzyme; Short=VPE; Flags: Precursor gi|633185|emb|CAA87720.1| cystein proteinase (by similarity) [Citrus sinensis] gi|1588548|prf||2208463A vascular processing protease

 Score =  646 bits (1667), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 308/309 (99%), Positives = 308/309 (99%)

Query: 1   MPTSRYIYADELIDVLKKKHASGNYKSLVFYLEACESGSIFEGLLPEGLNIYATTASNAE 60
           MPTSRYIYADELIDVLKKKHASGNYKSLVFYLEACESGSIFEGLL EGLNIYATTASNAE
Sbjct: 186 MPTSRYIYADELIDVLKKKHASGNYKSLVFYLEACESGSIFEGLLLEGLNIYATTASNAE 245

Query: 61  ESSWGTYCPGEIPGPPPEYSTCLGDLYSIAWMEDSDIHNLRTETLHQQYELVKTRTASYN 120
           ESSWGTYCPGEIPGPPPEYSTCLGDLYSIAWMEDSDIHNLRTETLHQQYELVKTRTASYN
Sbjct: 246 ESSWGTYCPGEIPGPPPEYSTCLGDLYSIAWMEDSDIHNLRTETLHQQYELVKTRTASYN 305

Query: 121 SYGSHVMQYGDIGLSKNNLFTYLGTNPANDNYTFVDENSLRPASKAVNQRDADLLHFWDK 180
           SYGSHVMQYGDIGLSKNNLFTYLGTNPANDNYTFVDENSLRPASKAVNQRDADLLHFWDK
Sbjct: 306 SYGSHVMQYGDIGLSKNNLFTYLGTNPANDNYTFVDENSLRPASKAVNQRDADLLHFWDK 365

Query: 181 YRKAPEGTPRKAEAQKQFFEAMSHRMHVDHSIKLIGKLLFGIEKGPEILNTVRPAGQPLV 240
           YRKAPEGTPRKAEAQKQFFEAMSHRMHVDHSIKLIGKLLFGIEKGPEILNTVRPAGQPLV
Sbjct: 366 YRKAPEGTPRKAEAQKQFFEAMSHRMHVDHSIKLIGKLLFGIEKGPEILNTVRPAGQPLV 425

Query: 241 DDWGCLKSLVRTFESHCGALSQYGMKHMRSLANICNTGIGKEKMAEASAQACENIPSGPW 300
           DDWGCLKSLVRTFESHCGALSQYGMKHMRSLANICNTGIGKEKMAEASAQACENIPSGPW
Sbjct: 426 DDWGCLKSLVRTFESHCGALSQYGMKHMRSLANICNTGIGKEKMAEASAQACENIPSGPW 485

Query: 301 SSLDKGFSA 309
           SSLDKGFSA
Sbjct: 486 SSLDKGFSA 494

Source: Citrus sinensis

Species: Citrus sinensis

Genus: Citrus

Family: Rutaceae

Order: Sapindales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224141591|ref|XP_002324151.1| predicted protein [Populus trichocarpa] gi|222865585|gb|EEF02716.1| predicted protein [Populus trichocarpa]

 Score =  564 bits (1453), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 261/310 (84%), Positives = 288/310 (92%), Gaps = 1/310 (0%)

Query: 1   MPTSRYIYADELIDVLKKKHASGNYKSLVFYLEACESGSIFEGLLPEGLNIYATTASNAE 60
           MPT+ Y+YAD+LIDVLKKKHASG YKSLVFYLEACESGSIFEGLLP+GLNIYATTASNAE
Sbjct: 180 MPTNPYLYADDLIDVLKKKHASGTYKSLVFYLEACESGSIFEGLLPQGLNIYATTASNAE 239

Query: 61  ESSWGTYCPGEIPGPPPEYSTCLGDLYSIAWMEDSDIHNLRTETLHQQYELVKTRTASYN 120
           ESSWGTYCPGE P PPPEY TCLGDLYS+AWMEDSDIHNL+TETLHQQYELVK RT++ N
Sbjct: 240 ESSWGTYCPGENPSPPPEYETCLGDLYSVAWMEDSDIHNLQTETLHQQYELVKRRTSNDN 299

Query: 121 S-YGSHVMQYGDIGLSKNNLFTYLGTNPANDNYTFVDENSLRPASKAVNQRDADLLHFWD 179
           S YGSHVMQYGD+GLSK+N+F Y+GTNPANDN+TF+DEN LRP SKAVNQRDADL+HFWD
Sbjct: 300 SPYGSHVMQYGDVGLSKDNIFLYMGTNPANDNFTFMDENLLRPRSKAVNQRDADLVHFWD 359

Query: 180 KYRKAPEGTPRKAEAQKQFFEAMSHRMHVDHSIKLIGKLLFGIEKGPEILNTVRPAGQPL 239
           KYRKAPEG+ RK EAQKQF EAMSHRMH+DHSIKLIGKLLFGIEK  E+LN +RPAGQPL
Sbjct: 360 KYRKAPEGSSRKVEAQKQFVEAMSHRMHIDHSIKLIGKLLFGIEKASEVLNAIRPAGQPL 419

Query: 240 VDDWGCLKSLVRTFESHCGALSQYGMKHMRSLANICNTGIGKEKMAEASAQACENIPSGP 299
           VDDW CLK+LVRTFE+HCG++SQYGMKHMRSLAN+CN GIGKE+MAEASAQAC + PSGP
Sbjct: 420 VDDWDCLKTLVRTFETHCGSVSQYGMKHMRSLANLCNAGIGKEQMAEASAQACVSFPSGP 479

Query: 300 WSSLDKGFSA 309
           WS+L KGFSA
Sbjct: 480 WSTLHKGFSA 489

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|233142300|gb|ACQ91103.1| vacuolar processing enzyme a [Populus tomentosa]

 Score =  558 bits (1437), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 261/310 (84%), Positives = 285/310 (91%), Gaps = 1/310 (0%)

Query: 1   MPTSRYIYADELIDVLKKKHASGNYKSLVFYLEACESGSIFEGLLPEGLNIYATTASNAE 60
           MPT+ Y+YAD+LIDVLKKKHASG YKSLVFYLEACESGSIFEGLLP+GLNIYATTASNAE
Sbjct: 184 MPTNPYLYADDLIDVLKKKHASGTYKSLVFYLEACESGSIFEGLLPQGLNIYATTASNAE 243

Query: 61  ESSWGTYCPGEIPGPPPEYSTCLGDLYSIAWMEDSDIHNLRTETLHQQYELVKTRTASYN 120
           ESSWGTYCPGE P PPPEY TCLGDLYS+AWMEDSDIHNLRTETLHQQYELVK RT+  N
Sbjct: 244 ESSWGTYCPGEYPSPPPEYETCLGDLYSVAWMEDSDIHNLRTETLHQQYELVKRRTSDEN 303

Query: 121 S-YGSHVMQYGDIGLSKNNLFTYLGTNPANDNYTFVDENSLRPASKAVNQRDADLLHFWD 179
           S YGSHVMQYGD+GLSK +LF Y+GTNPANDN+TF+++NSLRP SKAVNQRDADL+HFW 
Sbjct: 304 SAYGSHVMQYGDVGLSKEDLFQYMGTNPANDNFTFLEDNSLRPPSKAVNQRDADLVHFWA 363

Query: 180 KYRKAPEGTPRKAEAQKQFFEAMSHRMHVDHSIKLIGKLLFGIEKGPEILNTVRPAGQPL 239
           KYRKAPEG+ RK EAQKQF EAMSHRMH+DHSIKLIGKLLFGIEK  E+LN VRPAGQPL
Sbjct: 364 KYRKAPEGSSRKVEAQKQFVEAMSHRMHIDHSIKLIGKLLFGIEKASEVLNNVRPAGQPL 423

Query: 240 VDDWGCLKSLVRTFESHCGALSQYGMKHMRSLANICNTGIGKEKMAEASAQACENIPSGP 299
           VDDW CLK+LVRTFE+HCG++SQYGMKHMRSLAN+CN GI KE+MAEASAQAC +IPSG 
Sbjct: 424 VDDWVCLKTLVRTFETHCGSISQYGMKHMRSLANLCNAGIVKEQMAEASAQACVSIPSGS 483

Query: 300 WSSLDKGFSA 309
           WSSL KGFSA
Sbjct: 484 WSSLHKGFSA 493

Source: Populus tomentosa

Species: Populus tomentosa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224088921|ref|XP_002308580.1| predicted protein [Populus trichocarpa] gi|222854556|gb|EEE92103.1| predicted protein [Populus trichocarpa]

 Score =  558 bits (1437), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 263/310 (84%), Positives = 284/310 (91%), Gaps = 1/310 (0%)

Query: 1   MPTSRYIYADELIDVLKKKHASGNYKSLVFYLEACESGSIFEGLLPEGLNIYATTASNAE 60
           MPT+ Y+YAD+LIDVLKKKHASG YKSLVFYLEACESGSIFEGLLP+GLNIYATTASNAE
Sbjct: 184 MPTNPYLYADDLIDVLKKKHASGTYKSLVFYLEACESGSIFEGLLPQGLNIYATTASNAE 243

Query: 61  ESSWGTYCPGEIPGPPPEYSTCLGDLYSIAWMEDSDIHNLRTETLHQQYELVKTRTASYN 120
           ESSWGTYCPGE P PPPEY TCLGDLYS+AWMEDSDIHNLRTETLHQQYELVK RT+  N
Sbjct: 244 ESSWGTYCPGEYPSPPPEYETCLGDLYSVAWMEDSDIHNLRTETLHQQYELVKRRTSYDN 303

Query: 121 S-YGSHVMQYGDIGLSKNNLFTYLGTNPANDNYTFVDENSLRPASKAVNQRDADLLHFWD 179
           S YGSHVMQYGD+GLSK++LF Y+GTNPANDNYTFV+ENSLRP SK VNQRDADL+HFW 
Sbjct: 304 SPYGSHVMQYGDVGLSKDDLFQYMGTNPANDNYTFVEENSLRPHSKVVNQRDADLVHFWT 363

Query: 180 KYRKAPEGTPRKAEAQKQFFEAMSHRMHVDHSIKLIGKLLFGIEKGPEILNTVRPAGQPL 239
           KYRKAPEG+ RK EAQKQF EAMSHRMH+DHSIKLIGKLLFGIEK  E LNTVRPAGQPL
Sbjct: 364 KYRKAPEGSSRKVEAQKQFVEAMSHRMHIDHSIKLIGKLLFGIEKASEALNTVRPAGQPL 423

Query: 240 VDDWGCLKSLVRTFESHCGALSQYGMKHMRSLANICNTGIGKEKMAEASAQACENIPSGP 299
           VDDW CLK+LVRTFE+HCG++SQYGMKHMRSLAN+CN GI KE+MAEASAQAC + PSG 
Sbjct: 424 VDDWVCLKTLVRTFETHCGSISQYGMKHMRSLANLCNAGIVKEQMAEASAQACVSFPSGS 483

Query: 300 WSSLDKGFSA 309
           WSSL KGFSA
Sbjct: 484 WSSLHKGFSA 493

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255550848|ref|XP_002516472.1| Vacuolar-processing enzyme precursor, putative [Ricinus communis] gi|223544292|gb|EEF45813.1| Vacuolar-processing enzyme precursor, putative [Ricinus communis]

 Score =  557 bits (1435), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 259/310 (83%), Positives = 285/310 (91%), Gaps = 1/310 (0%)

Query: 1   MPTSRYIYADELIDVLKKKHASGNYKSLVFYLEACESGSIFEGLLPEGLNIYATTASNAE 60
           MPT+ Y+YA++LIDVLKKKHASG YKSLVFYLEACESGSIFEGLLPEGLNIYATTASNAE
Sbjct: 183 MPTNPYLYANDLIDVLKKKHASGTYKSLVFYLEACESGSIFEGLLPEGLNIYATTASNAE 242

Query: 61  ESSWGTYCPGEIPGPPPEYSTCLGDLYSIAWMEDSDIHNLRTETLHQQYELVKTRTASYN 120
           ESSWGTYCPGE P PPPEY TCLGDLYSIAWMEDSD+HNL+TETLHQQYELVK RT++ N
Sbjct: 243 ESSWGTYCPGEYPSPPPEYETCLGDLYSIAWMEDSDVHNLQTETLHQQYELVKRRTSNGN 302

Query: 121 S-YGSHVMQYGDIGLSKNNLFTYLGTNPANDNYTFVDENSLRPASKAVNQRDADLLHFWD 179
           S YGSHVMQYGD+GLS+ NLF Y+GTNPANDNYTFVDENSL P SKAVNQRDADL+HFWD
Sbjct: 303 SAYGSHVMQYGDVGLSRENLFLYMGTNPANDNYTFVDENSLTPPSKAVNQRDADLVHFWD 362

Query: 180 KYRKAPEGTPRKAEAQKQFFEAMSHRMHVDHSIKLIGKLLFGIEKGPEILNTVRPAGQPL 239
           KYRKAP+G+ RK +AQKQF EAMSHRMH+DHS+KLIGKLLFG+EK  E+L+TVRPAGQPL
Sbjct: 363 KYRKAPDGSARKDQAQKQFVEAMSHRMHIDHSVKLIGKLLFGLEKASEVLSTVRPAGQPL 422

Query: 240 VDDWGCLKSLVRTFESHCGALSQYGMKHMRSLANICNTGIGKEKMAEASAQACENIPSGP 299
           VDDW CLK LVRTFE+HCG++SQYGMKHMRSLAN+CN GI +E+MAEASAQAC   PSGP
Sbjct: 423 VDDWDCLKKLVRTFETHCGSISQYGMKHMRSLANLCNAGIREEQMAEASAQACITFPSGP 482

Query: 300 WSSLDKGFSA 309
           WSSL KGFSA
Sbjct: 483 WSSLHKGFSA 492

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225429442|ref|XP_002276759.1| PREDICTED: vacuolar-processing enzyme [Vitis vinifera] gi|296081609|emb|CBI20614.3| unnamed protein product [Vitis vinifera]

 Score =  552 bits (1423), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 257/310 (82%), Positives = 284/310 (91%), Gaps = 1/310 (0%)

Query: 1   MPTSRYIYADELIDVLKKKHASGNYKSLVFYLEACESGSIFEGLLPEGLNIYATTASNAE 60
           MPTS Y+YA++LI+VLKKKHASG Y SLVFYLEACESGSIFEGLLPEGLNIYATTA+NAE
Sbjct: 184 MPTSPYLYANDLIEVLKKKHASGTYNSLVFYLEACESGSIFEGLLPEGLNIYATTAANAE 243

Query: 61  ESSWGTYCPGEIPGPPPEYSTCLGDLYSIAWMEDSDIHNLRTETLHQQYELVKTRTASYN 120
           ESSWGTYCPGE P PPPEY TCLGDLYS+AWMEDSD+HNLRTETL QQYELVK RTA+ N
Sbjct: 244 ESSWGTYCPGEDPSPPPEYETCLGDLYSVAWMEDSDVHNLRTETLRQQYELVKKRTANDN 303

Query: 121 S-YGSHVMQYGDIGLSKNNLFTYLGTNPANDNYTFVDENSLRPASKAVNQRDADLLHFWD 179
           S YGSHVMQYGD+GL+K +L  Y+GTNPANDNYTFVD NSLR  SKAVNQRDADL+HFWD
Sbjct: 304 SVYGSHVMQYGDLGLNKEDLVLYMGTNPANDNYTFVDNNSLRLPSKAVNQRDADLVHFWD 363

Query: 180 KYRKAPEGTPRKAEAQKQFFEAMSHRMHVDHSIKLIGKLLFGIEKGPEILNTVRPAGQPL 239
           K+RKAPEG+PRKAEAQKQF EAMSHR H+DH+IKL+G+LLFG++KG E+L TVRPAGQPL
Sbjct: 364 KFRKAPEGSPRKAEAQKQFLEAMSHRTHIDHAIKLVGRLLFGMKKGSEVLKTVRPAGQPL 423

Query: 240 VDDWGCLKSLVRTFESHCGALSQYGMKHMRSLANICNTGIGKEKMAEASAQACENIPSGP 299
           VDDW CLK+LVRTFE+HCG+LSQYGMKHMRS+ANICN GI KE+MAEASAQAC  IP GP
Sbjct: 424 VDDWHCLKTLVRTFEAHCGSLSQYGMKHMRSIANICNAGIEKEQMAEASAQACVTIPPGP 483

Query: 300 WSSLDKGFSA 309
           WSSLDKGFSA
Sbjct: 484 WSSLDKGFSA 493

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147799465|emb|CAN70603.1| hypothetical protein VITISV_040193 [Vitis vinifera]

 Score =  551 bits (1419), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 257/310 (82%), Positives = 284/310 (91%), Gaps = 1/310 (0%)

Query: 1   MPTSRYIYADELIDVLKKKHASGNYKSLVFYLEACESGSIFEGLLPEGLNIYATTASNAE 60
           MPTS Y+YA++LI+VLKKKHASG Y SLVFYLEACESGSIFEGLLPEGLNIYATTA+NAE
Sbjct: 184 MPTSPYLYANDLIEVLKKKHASGTYNSLVFYLEACESGSIFEGLLPEGLNIYATTAANAE 243

Query: 61  ESSWGTYCPGEIPGPPPEYSTCLGDLYSIAWMEDSDIHNLRTETLHQQYELVKTRTASYN 120
           ESSWGTYCPGE P PPPEY TCLGDLYS+AWMEDSD+HNLRTETL QQYELVK RTA+ N
Sbjct: 244 ESSWGTYCPGEDPSPPPEYETCLGDLYSVAWMEDSDVHNLRTETLRQQYELVKKRTANDN 303

Query: 121 S-YGSHVMQYGDIGLSKNNLFTYLGTNPANDNYTFVDENSLRPASKAVNQRDADLLHFWD 179
           S YGSHVMQYGD+GL+K +L  Y+GTNPANDNYTFVD NSLR  SKAVNQRDADL+HFWD
Sbjct: 304 SVYGSHVMQYGDLGLNKEDLVLYMGTNPANDNYTFVDNNSLRLPSKAVNQRDADLVHFWD 363

Query: 180 KYRKAPEGTPRKAEAQKQFFEAMSHRMHVDHSIKLIGKLLFGIEKGPEILNTVRPAGQPL 239
           K+RKAPEG+PRKAEAQKQF EAMSHR H+DH+IKL+G+LLFG++KG E+L TVRPAGQPL
Sbjct: 364 KFRKAPEGSPRKAEAQKQFLEAMSHRTHIDHAIKLVGRLLFGMKKGSEVLKTVRPAGQPL 423

Query: 240 VDDWGCLKSLVRTFESHCGALSQYGMKHMRSLANICNTGIGKEKMAEASAQACENIPSGP 299
           VDDW CLK+LVRTFE+HCG+LSQYGMKHMRS+ANICN GI KE+MAEASAQAC  IP GP
Sbjct: 424 VDDWHCLKTLVRTFEAHCGSLSQYGMKHMRSIANICNAGIEKEQMAEASAQACVTIPPGP 483

Query: 300 WSSLDKGFSA 309
           WSSLDKGFSA
Sbjct: 484 WSSLDKGFSA 493

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|237861979|gb|ACR24644.1| vacuolar processing enzyme [Malus hupehensis var. mengshanensis]

 Score =  549 bits (1415), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 253/310 (81%), Positives = 284/310 (91%), Gaps = 1/310 (0%)

Query: 1   MPTSRYIYADELIDVLKKKHASGNYKSLVFYLEACESGSIFEGLLPEGLNIYATTASNAE 60
           MPTS YIYA++LI+VLKKKHA+G YKSLVFYLEACESGSIFEGLLPEGLNI+ATTASNAE
Sbjct: 185 MPTSPYIYANDLIEVLKKKHAAGTYKSLVFYLEACESGSIFEGLLPEGLNIFATTASNAE 244

Query: 61  ESSWGTYCPGEIPGPPPEYSTCLGDLYSIAWMEDSDIHNLRTETLHQQYELVKTRTASYN 120
           ESSWGTYCPGE P PPPEY TCLGDLYS+ WMEDSD+HNLR+ETLHQQYELVK RTA+ N
Sbjct: 245 ESSWGTYCPGEYPSPPPEYXTCLGDLYSVVWMEDSDVHNLRSETLHQQYELVKMRTANDN 304

Query: 121 S-YGSHVMQYGDIGLSKNNLFTYLGTNPANDNYTFVDENSLRPASKAVNQRDADLLHFWD 179
           S +GSHVMQYGD+GLSKNNLF Y+GTNPANDNYTF+ ENSLRP+SKAVNQRDADLL FW 
Sbjct: 305 SGFGSHVMQYGDVGLSKNNLFVYMGTNPANDNYTFLGENSLRPSSKAVNQRDADLLRFWH 364

Query: 180 KYRKAPEGTPRKAEAQKQFFEAMSHRMHVDHSIKLIGKLLFGIEKGPEILNTVRPAGQPL 239
           KYRKAPEG+ RK +AQK F EAMSHRMH+D ++KLIGKLLFGIEKGP++LN VRPAGQPL
Sbjct: 365 KYRKAPEGSARKIQAQKDFVEAMSHRMHIDQTMKLIGKLLFGIEKGPQVLNAVRPAGQPL 424

Query: 240 VDDWGCLKSLVRTFESHCGALSQYGMKHMRSLANICNTGIGKEKMAEASAQACENIPSGP 299
           VDDW CLK++VR+FE+HCG+LSQYGMKHMRSLANICN G+ +E+MAEASAQAC + PSG 
Sbjct: 425 VDDWDCLKTMVRSFETHCGSLSQYGMKHMRSLANICNAGMTQEQMAEASAQACVSAPSGR 484

Query: 300 WSSLDKGFSA 309
           WSSL +GFSA
Sbjct: 485 WSSLHRGFSA 494

Source: Malus hupehensis var. mengshanensis

Species: Malus hupehensis

Genus: Malus

Family: Rosaceae

Order: Rosales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356514571|ref|XP_003525979.1| PREDICTED: vacuolar-processing enzyme-like [Glycine max]

 Score =  539 bits (1389), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 253/310 (81%), Positives = 280/310 (90%), Gaps = 1/310 (0%)

Query: 1   MPTSRYIYADELIDVLKKKHASGNYKSLVFYLEACESGSIFEGLLPEGLNIYATTASNAE 60
           MPT+ Y+YA +LI+VLKKKHASG YKSLVFYLEACESGSIFEGLLPEGLNIYATTASNAE
Sbjct: 175 MPTNPYMYASDLIEVLKKKHASGTYKSLVFYLEACESGSIFEGLLPEGLNIYATTASNAE 234

Query: 61  ESSWGTYCPGEIPGPPPEYSTCLGDLYSIAWMEDSDIHNLRTETLHQQYELVKTRTASYN 120
           ESSWGTYCPGE P PPPEY TCLGDLYS+AWMEDSDIHNLRTETLHQQY+LVK RT + N
Sbjct: 235 ESSWGTYCPGEYPSPPPEYETCLGDLYSVAWMEDSDIHNLRTETLHQQYDLVKERTMNGN 294

Query: 121 S-YGSHVMQYGDIGLSKNNLFTYLGTNPANDNYTFVDENSLRPASKAVNQRDADLLHFWD 179
           S YGSHVMQYGDIGLSKNNL  YLGTNPANDN+TFV +NSL P SKAVNQRDADL+HFWD
Sbjct: 295 SIYGSHVMQYGDIGLSKNNLVLYLGTNPANDNFTFVHKNSLVPPSKAVNQRDADLIHFWD 354

Query: 180 KYRKAPEGTPRKAEAQKQFFEAMSHRMHVDHSIKLIGKLLFGIEKGPEILNTVRPAGQPL 239
           K+RKAP G+ RKA A+K+  EAMSHRMH+D ++KLIGKLLFGIEKGPE+L++VRPAGQPL
Sbjct: 355 KFRKAPVGSSRKAAAEKEILEAMSHRMHIDDNMKLIGKLLFGIEKGPELLSSVRPAGQPL 414

Query: 240 VDDWGCLKSLVRTFESHCGALSQYGMKHMRSLANICNTGIGKEKMAEASAQACENIPSGP 299
           VDDW CLK+LVRTFE+HCG+LSQYGMKHMRS AN CN GI KE+MAEASAQAC +IP+  
Sbjct: 415 VDDWDCLKTLVRTFETHCGSLSQYGMKHMRSFANFCNAGIRKEQMAEASAQACVSIPASS 474

Query: 300 WSSLDKGFSA 309
           WSSL +GFSA
Sbjct: 475 WSSLHRGFSA 484

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|34530959|dbj|BAC86022.1| unnamed protein product [Homo sapiens]

 Score =  534 bits (1376), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 251/310 (80%), Positives = 278/310 (89%), Gaps = 1/310 (0%)

Query: 1   MPTSRYIYADELIDVLKKKHASGNYKSLVFYLEACESGSIFEGLLPEGLNIYATTASNAE 60
           MPT+ Y+YA +LI+VLKKKHASG+YKSLVFYLEACESGSIFEGLLPEGLNIYATTASNAE
Sbjct: 174 MPTNPYVYASDLIEVLKKKHASGSYKSLVFYLEACESGSIFEGLLPEGLNIYATTASNAE 233

Query: 61  ESSWGTYCPGEIPGPPPEYSTCLGDLYSIAWMEDSDIHNLRTETLHQQYELVKTRTASYN 120
           ESSWGTYCPGE P PP EY TCLGDLYS+AWMEDSDIHNL+TETLHQQYELVK RT + N
Sbjct: 234 ESSWGTYCPGEYPSPPSEYETCLGDLYSVAWMEDSDIHNLQTETLHQQYELVKQRTMNGN 293

Query: 121 S-YGSHVMQYGDIGLSKNNLFTYLGTNPANDNYTFVDENSLRPASKAVNQRDADLLHFWD 179
           S YGSHVMQYGDIGLS+NNL  YLGTNPANDN+TFV +NSL P SKAVNQRDADL+HFWD
Sbjct: 294 SIYGSHVMQYGDIGLSENNLVLYLGTNPANDNFTFVLKNSLVPPSKAVNQRDADLIHFWD 353

Query: 180 KYRKAPEGTPRKAEAQKQFFEAMSHRMHVDHSIKLIGKLLFGIEKGPEILNTVRPAGQPL 239
           K+RKAP G+ RKA A+KQ  EAMSHRMH+D S+K IGKL FGIEKGPE+L++VRPAGQPL
Sbjct: 354 KFRKAPVGSSRKAAAEKQILEAMSHRMHIDDSMKRIGKLFFGIEKGPELLSSVRPAGQPL 413

Query: 240 VDDWGCLKSLVRTFESHCGALSQYGMKHMRSLANICNTGIGKEKMAEASAQACENIPSGP 299
           VDDW CLK+LVRTFE+HCG+LSQYGMKHMRS AN CN GI KE+MAEASAQAC NIP+  
Sbjct: 414 VDDWDCLKTLVRTFETHCGSLSQYGMKHMRSFANFCNAGIRKEQMAEASAQACVNIPASS 473

Query: 300 WSSLDKGFSA 309
           WSS+ +GFSA
Sbjct: 474 WSSMHRGFSA 483

Source: Homo sapiens

Species: Homo sapiens

Genus: Homo

Family: Hominidae

Order: Primates

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	309
TAIR|locus:2123782	494	GAMMA-VPE "gamma vacuolar proc	1.0	0.625	0.764	9.8e-135
TAIR|locus:2043510	478	ALPHA-VPE "alpha-vacuolar proc	0.996	0.644	0.745	1.2e-127
TAIR|locus:2026242	486	BETA-VPE "beta vacuolar proces	0.935	0.594	0.568	3.1e-90
TAIR|locus:2087625	466	DELTA-VPE "delta vacuolar proc	0.941	0.624	0.469	5.5e-70
WB|WBGene00012144	462	T28H10.3 [Caenorhabditis elega	0.799	0.534	0.353	3.6e-34
ZFIN|ZDB-GENE-021030-1	438	lgmn "legumain" [Danio rerio (	0.844	0.595	0.309	3.8e-30
UNIPROTKB|E1C958	431	LGMN "Uncharacterized protein"	0.779	0.559	0.328	2.4e-28
UNIPROTKB|E2QXF2	433	LGMN "Uncharacterized protein"	0.404	0.288	0.434	7.2e-28
UNIPROTKB|Q95M12	433	LGMN "Legumain" [Bos taurus (t	0.838	0.598	0.304	9.4e-27
RGD|619832	435	Lgmn "legumain" [Rattus norveg	0.404	0.287	0.427	4.5e-26

TAIR|locus:2123782 GAMMA-VPE "gamma vacuolar processing enzyme" [Arabidopsis thaliana (taxid:3702)]

 Score = 1320 (469.7 bits), Expect = 9.8e-135, P = 9.8e-135
 Identities = 237/310 (76%), Positives = 271/310 (87%)

Query:     1 MPTSRYIYADELIDVLKKKHASGNYKSLVFYLEACESGSIFEGLLPEGLNIYATTASNAE 60
             MPTS Y+YA++L DVLKKKHA G YKSLVFYLEACESGSIFEGLLPEGLNIYATTASNAE
Sbjct:   185 MPTSPYLYANDLNDVLKKKHALGTYKSLVFYLEACESGSIFEGLLPEGLNIYATTASNAE 244

Query:    61 ESSWGTYCPGEIPGPPPEYSTCLGDLYSIAWMEDSDIHNLRTETLHQQYELVKTRTASYN 120
             ESSWGTYCPGE P PPPEY TCLGDLYS+AWMEDS +HNL+TETLHQQYELVK RTA   
Sbjct:   245 ESSWGTYCPGEEPSPPPEYETCLGDLYSVAWMEDSGMHNLQTETLHQQYELVKRRTAPVG 304

Query:   121 -SYGSHVMQYGDIGLSKNNLFTYLGTNPANDNYTFVDENSLRPASKAVNQRDADLLHFWD 179
              SYGSHVMQYGD+G+SK+NL  Y+GTNPANDN+TF D NSL+P S+  NQRDADL+HFW+
Sbjct:   305 YSYGSHVMQYGDVGISKDNLDLYMGTNPANDNFTFADANSLKPPSRVTNQRDADLVHFWE 364

Query:   180 KYRKAPEGTPRKAEAQKQFFEAMSHRMHVDHSIKLIGKLLFGIEKGPEILNTVRPAGQPL 239
             KYRKAPEG+ RK EAQKQ  EAMSHR+H+D+S+ L+GK+LFGI +GPE+LN VR AGQPL
Sbjct:   365 KYRKAPEGSARKTEAQKQVLEAMSHRLHIDNSVILVGKILFGISRGPEVLNKVRSAGQPL 424

Query:   240 VDDWGCLKSLVRTFESHCGALSQYGMKHMRSLANICNTGIGKEKMAEASAQACENIPSGP 299
             VDDW CLK+ VR FE HCG+LSQYG+KHMRS ANICN GI  E+M EA++QAC  +P+GP
Sbjct:   425 VDDWNCLKNQVRAFERHCGSLSQYGIKHMRSFANICNAGIQMEQMEEAASQACTTLPTGP 484

Query:   300 WSSLDKGFSA 309
             WSSL++GFSA
Sbjct:   485 WSSLNRGFSA 494

GO:0004197 "cysteine-type endopeptidase activity" evidence=IEA;ISS;IDA

GO:0005576 "extracellular region" evidence=ISM

GO:0006508 "proteolysis" evidence=IEA;ISS

GO:0000323 "lytic vacuole" evidence=IDA

GO:0006944 "cellular membrane fusion" evidence=RCA

GO:0048193 "Golgi vesicle transport" evidence=RCA

GO:0006624 "vacuolar protein processing" evidence=ISS

TAIR|locus:2043510 ALPHA-VPE "alpha-vacuolar processing enzyme" [Arabidopsis thaliana (taxid:3702)]

 Score = 1253 (446.1 bits), Expect = 1.2e-127, P = 1.2e-127
 Identities = 231/310 (74%), Positives = 267/310 (86%)

Query:     1 MPTSRYIYADELIDVLKKKHASGNYKSLVFYLEACESGSIFEGLLPEGLNIYATTASNAE 60
             MPTS  +YA++L DVLKKK+ASG YKSLVFYLEACESGSIFEGLLPEGLNIYATTASNAE
Sbjct:   170 MPTSPNLYANDLNDVLKKKYASGTYKSLVFYLEACESGSIFEGLLPEGLNIYATTASNAE 229

Query:    61 ESSWGTYCPGEIPGPPPEYSTCLGDLYSIAWMEDSDIHNLRTETLHQQYELVKTRTA-SY 119
             ESSWGTYCPGE P PP EY TCLGDLYS+AW+EDS+ HNL+TETLH+QYELVK RTA S 
Sbjct:   230 ESSWGTYCPGEDPSPPSEYETCLGDLYSVAWIEDSEKHNLQTETLHEQYELVKKRTAGSG 289

Query:   120 NSYGSHVMQYGDIGLSKNNLFTYLGTNPANDNYTFVDENSLRPASKAVNQRDADLLHFWD 179
              SYGSHVM++GDIGLSK  L  ++GTNPA++N+TFV+ENS+RP S+  NQRDADL+HFW 
Sbjct:   290 KSYGSHVMEFGDIGLSKEKLVLFMGTNPADENFTFVNENSIRPPSRVTNQRDADLVHFWH 349

Query:   180 KYRKAPEGTPRKAEAQKQFFEAMSHRMHVDHSIKLIGKLLFGIEKGPEILNTVRPAGQPL 239
             KY+KAPEG+ RK EAQKQ  EAMSHR+HVD+SI LIG LLFG+E G  +LN VRP+G+PL
Sbjct:   350 KYQKAPEGSARKVEAQKQVLEAMSHRLHVDNSILLIGILLFGLE-GHAVLNKVRPSGEPL 408

Query:   240 VDDWGCLKSLVRTFESHCGALSQYGMKHMRSLANICNTGIGKEKMAEASAQACENIPSGP 299
             VDDW CLKSLVR FE HCG+LSQYG+KHMRS+AN+CN GI   +M EA+ QAC  IP+ P
Sbjct:   409 VDDWDCLKSLVRAFERHCGSLSQYGIKHMRSIANMCNAGIQMRQMEEAAMQACPTIPTSP 468

Query:   300 WSSLDKGFSA 309
             WSSLD+GFSA
Sbjct:   469 WSSLDRGFSA 478

GO:0004197 "cysteine-type endopeptidase activity" evidence=IEA;ISS

GO:0005576 "extracellular region" evidence=ISM

GO:0006508 "proteolysis" evidence=IEA;ISS

GO:0006624 "vacuolar protein processing" evidence=ISS

TAIR|locus:2026242 BETA-VPE "beta vacuolar processing enzyme" [Arabidopsis thaliana (taxid:3702)]

 Score = 900 (321.9 bits), Expect = 3.1e-90, P = 3.1e-90
 Identities = 167/294 (56%), Positives = 211/294 (71%)

Query:     1 MPTSRYIYADELIDVLKKKHASGNYKSLVFYLEACESGSIFEGLLPEGLNIYATTASNAE 60
             MP + +IYA + I+ LKKKHASG YK +V Y+EACESGSIFEG++P+ LNIY TTASNA+
Sbjct:   177 MPNTPHIYAADFIETLKKKHASGTYKEMVIYVEACESGSIFEGIMPKDLNIYVTTASNAQ 236

Query:    61 ESSWGTYCPGEIPGPPPEYSTCLGDLYSIAWMEDSDIHNLRTETLHQQYELVKTRTASYN 120
             ESS+GTYCPG  P PP EY TCLGDLYS+AWMEDS+ HNL+ ET+ QQY  VK RT++YN
Sbjct:   237 ESSYGTYCPGMNPSPPSEYITCLGDLYSVAWMEDSETHNLKKETIKQQYHTVKMRTSNYN 296

Query:   121 SY--GSHVMQYGDIGLSKNNLFTYLGTNPANDNYTFVDENSLRPASKAVNQRDADLLHFW 178
             +Y  GSHVM+YG+  +    L+ Y G +PA  N   ++E  ++     VNQRDADLL  W
Sbjct:   297 TYSGGSHVMEYGNNSIKSEKLYLYQGFDPATVNLP-LNELPVKSKIGVVNQRDADLLFLW 355

Query:   179 DKYRKAPEGTPRKAEAQKQFFEAMSHRMHVDHSIKLIGKLLFGIEKGPEILNTVRPAGQP 238
               YR + +G+ +K +  K+  E   HR H+D S++LI  +LFG      +LN VR  G P
Sbjct:   356 HMYRTSEDGSRKKDDTLKELTETTRHRKHLDASVELIATILFGPTMN--VLNLVREPGLP 413

Query:   239 LVDDWGCLKSLVRTFESHCGALSQYGMKHMRSLANICNTGIGKEKMAEASAQAC 292
             LVDDW CLKS+VR FE HCG+L+QYGMKHMR+ AN+CN G+ KE M EAS  AC
Sbjct:   414 LVDDWECLKSMVRVFEEHCGSLTQYGMKHMRAFANVCNNGVSKELMEEASTAAC 467

GO:0004197 "cysteine-type endopeptidase activity" evidence=IEA;ISS

GO:0006508 "proteolysis" evidence=IEA;ISS

GO:0006624 "vacuolar protein processing" evidence=ISS

TAIR|locus:2087625 DELTA-VPE "delta vacuolar processing enzyme" [Arabidopsis thaliana (taxid:3702)]

 Score = 709 (254.6 bits), Expect = 5.5e-70, P = 5.5e-70
 Identities = 138/294 (46%), Positives = 186/294 (63%)

Query:     1 MPTSRYIYADELIDVLKKKHASGNYKSLVFYLEACESGSIFEGLLPEGLNIYATTASNAE 60
             MPT   + A +  +VL+K H    Y  +V Y+EACESGS+FEG+L + LNIYA TA+N++
Sbjct:   172 MPTGDEVMAKDFNEVLEKMHKRKKYNKMVIYVEACESGSMFEGILKKNLNIYAVTAANSK 231

Query:    61 ESSWGTYCPGEIPGPPPEYSTCLGDLYSIAWMEDSDIHNLRTETLHQQYELVKTRTASYN 120
             ESSWG YCP   P PP E  TCLGD +SI+W+EDSD+H++  ETL QQY +VK R  S  
Sbjct:   232 ESSWGVYCPESYPPPPSEIGTCLGDTFSISWLEDSDLHDMSKETLEQQYHVVKRRVGSDV 291

Query:   121 SYGSHVMQYGDIGLSKNNLFTYLGTNPANDNYTFVDENSLRPASKA--VNQRDADLLHFW 178
                SHV ++G   + K+ L +Y+G NP NDN+TF +  S  P S +  VN RD  LL+  
Sbjct:   292 PETSHVCRFGTEKMLKDYLSSYIGRNPENDNFTFTESFS-SPISNSGLVNPRDIPLLYLQ 350

Query:   179 DKYRKAPEGTPRKAEAQKQFFEAMSHRMHVDHSIKLIGKLLFGIEKGPEILNTVRPAGQP 238
              K +KAP G+    EAQK+  +  +HR  +D SI  I +L         +L + R  GQP
Sbjct:   351 RKIQKAPMGSLESKEAQKKLLDEKNHRKQIDQSITDILRLSVKQTNVLNLLTSTRTTGQP 410

Query:   239 LVDDWGCLKSLVRTFESHCGALSQYGMKHMRSLANICNTGIGKEKMAEASAQAC 292
             LVDDW C K+LV +F++HCGA   YG+K+  +LANICN G+  ++   A  QAC
Sbjct:   411 LVDDWDCFKTLVNSFKNHCGATVHYGLKYTGALANICNMGVDVKQTVSAIEQAC 464

GO:0004197 "cysteine-type endopeptidase activity" evidence=IEA;ISS;IDA

GO:0006508 "proteolysis" evidence=IEA;ISS

GO:0009507 "chloroplast" evidence=ISM

GO:0006624 "vacuolar protein processing" evidence=ISS

GO:0005615 "extracellular space" evidence=IDA

GO:0010214 "seed coat development" evidence=IMP

GO:0012501 "programmed cell death" evidence=IMP

GO:0009686 "gibberellin biosynthetic process" evidence=RCA

GO:0009737 "response to abscisic acid stimulus" evidence=RCA

GO:0009740 "gibberellic acid mediated signaling pathway" evidence=RCA

GO:0009793 "embryo development ending in seed dormancy" evidence=RCA

GO:0009845 "seed germination" evidence=RCA

GO:0010162 "seed dormancy process" evidence=RCA

GO:0048608 "reproductive structure development" evidence=RCA

WB|WBGene00012144 T28H10.3 [Caenorhabditis elegans (taxid:6239)]

 Score = 371 (135.7 bits), Expect = 3.6e-34, P = 3.6e-34
 Identities = 95/269 (35%), Positives = 151/269 (56%)

Query:    11 ELIDVLKKKHASGNYKSLVFYLEACESGSIFEGLLPEGLNIYATTASNAEESSWGTYCPG 70
             +L DVL   H +  Y  L FYLEACESGS+FE +L   ++IYA +A+N+ ESSWGT+C  
Sbjct:   178 QLNDVLVWMHKNKKYSQLTFYLEACESGSMFEEVLRSDMDIYAISAANSHESSWGTFCEN 237

Query:    71 EIPGPPPEYSTCLGDLYSIAWMEDSDIHNLRTETLHQQYELVKTRTASYNSYGSHVMQYG 130
             ++  P      CLGDL+S+ WM DSD  +L+TETL  QYELVK  T   N   SHVMQ+G
Sbjct:   238 DMNLP------CLGDLFSVNWMTDSDGEDLKTETLEFQYELVKKET---NL--SHVMQFG 286

Query:   131 DIGLSKNNLFTYLGTNPANDNYTFVDENSLRPASKAVN--QRDADLLHFWDKYRKAPEGT 188
             D  ++K  +  + G     ++  +V++  L  ASK+VN   RD +L H   ++RK+ +  
Sbjct:   287 DKDIAKEAVALFQGDK---EDREYVEDFGLS-ASKSVNWPARDIELNHLISQHRKSNDLL 342

Query:   189 PRKAEAQKQFFEAMSHRMHVDHSIKLIGKLLFGIEKGPEILNTVRPAGQPLVDDWGCLKS 248
                 + + +       R  +  ++ +I +  F  E   ++++ V    +P++D   C   
Sbjct:   343 SSN-KLEYKINRIKETRRAIKRNVHMIVQKFFDGES-EDLISRVLTQTRPVLD-LRCHHI 399

Query:   249 LVRTFESHCGALSQY--GMKHMRSLANIC 275
              V  F+ +C   ++Y   MK+++ + N+C
Sbjct:   400 AVHLFKKYCINFNEYEYAMKYVKVINNMC 428

GO:0004197 "cysteine-type endopeptidase activity" evidence=IEA

GO:0006508 "proteolysis" evidence=IEA

GO:0009792 "embryo development ending in birth or egg hatching" evidence=IMP

ZFIN|ZDB-GENE-021030-1 lgmn "legumain" [Danio rerio (taxid:7955)]

 Score = 333 (122.3 bits), Expect = 3.8e-30, P = 3.8e-30
 Identities = 92/297 (30%), Positives = 153/297 (51%)

Query:     7 IYADELIDVLKKKHASGNYKSLVFYLEACESGSIFEGLLPEGLNIYATTASNAEESSWGT 66
             ++ D+L+D +K  H++  YK +VFY+EACESGS+ + L P  +N+YATTA+N +ESS+  
Sbjct:   163 LHVDDLMDTIKYMHSNNKYKKMVFYVEACESGSMMKPL-PVDINVYATTAANPDESSYAC 221

Query:    67 YCPGEIPGPPPEYSTCLGDLYSIAWMEDSDIHNLRTETLHQQYELVKTRTASYNSYGSHV 126
             Y             T LGD YS+ WMEDSD+ +L  ETL +Q+++VK +T   N+  SHV
Sbjct:   222 YYD-------EARDTYLGDWYSVNWMEDSDVEDLSKETLAKQFKIVKAKT---NT--SHV 269

Query:   127 MQYGDIGLSKNNLFTYLGTNPANDNYTFVDENSLRPASK--AVNQRDADLLHFWDKYRKA 184
             MQYG+  LS   +  + G++   D    V+  SL   ++   ++  D  L     K +K 
Sbjct:   270 MQYGNKTLSHMKVMAFQGSSKGLDKA--VEPVSLPVIAEHDLMSSPDVPLAILKRKLQKT 327

Query:   185 PE-----GTPRKAEAQKQFFEAMSHRMHVDHSIKLIGKLLFGIEKGPEILNTVRPAGQPL 239
              +     G   +  A  Q  E + + M      K++  ++   E+  + L+     G+  
Sbjct:   328 NDVDAVVGYLNEIHAHLQVRELLGNTMR-----KIVEHVVQDKEEVQDYLD-----GRSD 377

Query:   240 VDDWGCLKSLVRTFESHC----GALSQYGMKHMRSLANICNTGIGKEKMAEASAQAC 292
             +  + C K+ VR ++ HC        +Y ++H+ +L N+C  G    ++  A    C
Sbjct:   378 LTQYNCYKTAVRHYKKHCFNWHEQKFEYALRHLYALVNLCEGGYQAHRITAAMDDVC 434

GO:0004197 "cysteine-type endopeptidase activity" evidence=IEA

GO:0006508 "proteolysis" evidence=IEA

GO:0005575 "cellular_component" evidence=ND

UNIPROTKB|E1C958 LGMN "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 316 (116.3 bits), Expect = 2.4e-28, P = 2.4e-28
 Identities = 91/277 (32%), Positives = 145/277 (52%)

Query:    25 YKSLVFYLEACESGSIFEGLLPEGLNIYATTASNAEESSWGTYCPGEIPGPPPEYSTCLG 84
             Y+ +VFY+EACESGS+   L  + +N+YATTA+N  ESS+  Y   E         T LG
Sbjct:   179 YQKMVFYIEACESGSMMNHLA-DNINVYATTAANPRESSYACYYDDE-------RQTYLG 230

Query:    85 DLYSIAWMEDSDIHNLRTETLHQQYELVKTRTASYNSYGSHVMQYGDIGLSKNNLFTY-- 142
             D YS+ WMEDSD+ +LR ETLH+Q++LVK RT   N+  SHVMQYG+  +S   +  +  
Sbjct:   231 DWYSVNWMEDSDMEDLRKETLHKQFQLVKKRT---NT--SHVMQYGNKSISSMKVMQFQG 285

Query:   143 LGTNPANDNYTFVDENSLRPASK---AVNQRDADLLHFWDKYRKAPEGTPRKAEAQKQFF 199
             +G      +   V+ + L P+     A+ +R   L+   D Y    E     AE  K   
Sbjct:   286 MGKKAVPISLPPVEHHDLTPSPDVPLAIMKRK--LMATNDMY----EAKKIAAE-MKAHL 338

Query:   200 EAMSHRMHVDHSIKLIGKLLFGIEKGPEILNTVRPAGQPLVDDWGCLKSLVRTFESHC-- 257
             EA   + ++  S++ I  L+ G     E+ N +  + +  + ++ C ++ V  F++HC  
Sbjct:   339 EA---KEYIQESMRKIVTLITG---STELTNQIL-SDRLTISNYDCYQAAVNYFKTHCFN 391

Query:   258 --GALSQYGMKHMRSLANICNTGIGKEKMAEASAQAC 292
                 L +Y ++ + +L N+C      +++  A  Q C
Sbjct:   392 WHSPLYEYALRQLYALVNVCEGRYSIDRIFLAMDQVC 428

GO:0004197 "cysteine-type endopeptidase activity" evidence=IEA

GO:0001101 "response to acid" evidence=IEA

GO:0005770 "late endosome" evidence=IEA

GO:0006508 "proteolysis" evidence=IEA

GO:0040015 "negative regulation of multicellular organism growth" evidence=IEA

GO:0043524 "negative regulation of neuron apoptotic process" evidence=IEA

GO:0045177 "apical part of cell" evidence=IEA

UNIPROTKB|E2QXF2 LGMN "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 272 (100.8 bits), Expect = 7.2e-28, Sum P(2) = 7.2e-28
 Identities = 60/138 (43%), Positives = 85/138 (61%)

Query:     7 IYADELIDVLKKKHASGNYKSLVFYLEACESGSIFEGLLPEGLNIYATTASNAEESSWGT 66
             ++  +L D +   +    Y+ +VFY+EACESGS+   L P  +N+YATTA+N  ESS+  
Sbjct:   161 LHVKDLNDTIHYMYKHKMYQKMVFYIEACESGSMMRHL-PSNINVYATTAANPSESSYAC 219

Query:    67 YCPGEIPGPPPEYSTCLGDLYSIAWMEDSDIHNLRTETLHQQYELVKTRTASYNSYGSHV 126
             Y          + ST LGD YS+ WMEDSD+ +L  ETLH+QY+LVK+ T   N+  SHV
Sbjct:   220 YYD-------EKRSTFLGDWYSVNWMEDSDVEDLTKETLHRQYQLVKSHT---NT--SHV 267

Query:   127 MQYGDIGLSKNNLFTYLG 144
             MQYG+  +S   +  + G
Sbjct:   268 MQYGNKSISAMKVMQFQG 285

GO:0045177 "apical part of cell" evidence=IEA

GO:0043524 "negative regulation of neuron apoptotic process" evidence=IEA

GO:0040015 "negative regulation of multicellular organism growth" evidence=IEA

GO:0006508 "proteolysis" evidence=IEA

GO:0005770 "late endosome" evidence=IEA

GO:0001101 "response to acid" evidence=IEA

GO:0004197 "cysteine-type endopeptidase activity" evidence=IEA

UNIPROTKB|Q95M12 LGMN "Legumain" [Bos taurus (taxid:9913)]

 Score = 301 (111.0 bits), Expect = 9.4e-27, P = 9.4e-27
 Identities = 90/296 (30%), Positives = 149/296 (50%)

Query:     7 IYADELIDVLKKKHASGNYKSLVFYLEACESGSIFEGLLPEGLNIYATTASNAEESSWGT 66
             ++  +L + ++  +    Y+ +VFY+EACESGS+   L P+ +N+YATTA+N  ESS+  
Sbjct:   161 LHVKDLNETIRYMYEHKMYQKMVFYIEACESGSMMNHLPPD-INVYATTAANPRESSYAC 219

Query:    67 YCPGEIPGPPPEYSTCLGDLYSIAWMEDSDIHNLRTETLHQQYELVKTRTASYNSYGSHV 126
             Y          + ST LGD YS+ WMEDSD+ +L  ETLH+QY+LVK+ T   N+  SHV
Sbjct:   220 YYD-------EQRSTFLGDWYSVNWMEDSDVEDLTKETLHKQYQLVKSHT---NT--SHV 267

Query:   127 MQYGDIGLSKNNLFTYLGT-NPANDNYTF--VDENSLRPASK---AVNQRDADLLHFWDK 180
             MQYG+  +S   L  + G  + A+   +   V    L P+ +   ++ +R     +   +
Sbjct:   268 MQYGNKSISAMKLMQFQGLKHQASSPISLPAVSRLDLTPSPEVPLSIMKRKLMSTNDLQE 327

Query:   181 YRKAPEGTPRKAEAQKQFFEAMSHRMHVDHSIKLIGKLLFGIEKGPEILNTVRPAGQPLV 240
              R+  +   R  EA          R  ++ S++ I  L+ G     + L + R    PL 
Sbjct:   328 SRRLVQKIDRHLEA----------RNIIEKSVRKIVTLVSGSAAEVDRLLSQRA---PLT 374

Query:   241 DDWGCLKSLVRTFESHC----GALSQYGMKHMRSLANICNTGIGKEKMAEASAQAC 292
             +   C ++ V  F SHC        +Y ++H+  L N+C      +++  +  + C
Sbjct:   375 EH-ACYQTAVSHFRSHCFNWHNPTYEYALRHLYVLVNLCENPYPIDRIKLSMNKVC 429

GO:0005764 "lysosome" evidence=IEA

GO:0045177 "apical part of cell" evidence=IEA

GO:0043524 "negative regulation of neuron apoptotic process" evidence=IEA

GO:0040015 "negative regulation of multicellular organism growth" evidence=IEA

GO:0006508 "proteolysis" evidence=IEA

GO:0005770 "late endosome" evidence=IEA

GO:0001101 "response to acid" evidence=IEA

GO:0004197 "cysteine-type endopeptidase activity" evidence=IEA

RGD|619832 Lgmn "legumain" [Rattus norvegicus (taxid:10116)]

 Score = 266 (98.7 bits), Expect = 4.5e-26, Sum P(2) = 4.5e-26
 Identities = 59/138 (42%), Positives = 85/138 (61%)

Query:     7 IYADELIDVLKKKHASGNYKSLVFYLEACESGSIFEGLLPEGLNIYATTASNAEESSWGT 66
             ++  +L   ++  +    Y+ +VFY+EACESGS+   L P+ +++YATTA+N  ESS+  
Sbjct:   163 LHVKDLNKTIRYMYEHKMYQKMVFYIEACESGSMMNHL-PDDIDVYATTAANPNESSYAC 221

Query:    67 YCPGEIPGPPPEYSTCLGDLYSIAWMEDSDIHNLRTETLHQQYELVKTRTASYNSYGSHV 126
             Y          E ST LGD YS+ WMEDSD+ +L  ETLH+QY LVK+ T   N+  SHV
Sbjct:   222 YYD-------EERSTYLGDWYSVNWMEDSDVEDLTKETLHKQYHLVKSHT---NT--SHV 269

Query:   127 MQYGDIGLSKNNLFTYLG 144
             MQYG+  +S   +  + G
Sbjct:   270 MQYGNKSISTMKVMQFQG 287

GO:0001101 "response to acid" evidence=IEA;ISO

GO:0004197 "cysteine-type endopeptidase activity" evidence=IEA

GO:0005764 "lysosome" evidence=IEA

GO:0005770 "late endosome" evidence=IEA;ISO

GO:0006508 "proteolysis" evidence=IEA;ISO

GO:0008233 "peptidase activity" evidence=ISO

GO:0040015 "negative regulation of multicellular organism growth" evidence=IEA;ISO

GO:0043524 "negative regulation of neuron apoptotic process" evidence=IEA;ISO

GO:0045177 "apical part of cell" evidence=IEA;ISO

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q39119	VPEG_ARATH	3, ., 4, ., 2, 2, ., -	0.7645	1.0	0.6255	yes	no
O24325	VPE1_PHAVU	3, ., 4, ., 2, 2, ., -	0.7734	0.9967	0.6363	N/A	no
P49044	VPE_VICSA	3, ., 4, ., 2, 2, ., -	0.7476	0.9967	0.6247	N/A	no
P49043	VPE_CITSI	3, ., 4, ., 2, 2, ., -	0.9967	1.0	0.6255	no	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	3.4.22	0.766
3rd Layer	3.4.22.34	0.824

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: estExt_Genewise1_v1.C_LG_XVIII0730 hypothetical protein (489 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	309
pfam01650	258	pfam01650, Peptidase_C13, Peptidase C13 family	4e-67

>gnl|CDD|216627 pfam01650, Peptidase_C13, Peptidase C13 family

 Score =  210 bits (536), Expect = 4e-67
 Identities = 86/145 (59%), Positives = 103/145 (71%), Gaps = 12/145 (8%)

Query: 1   MPTSRYIYADELIDVLKKKHASGNYKSLVFYLEACESGSIFEGLLPEGLNIYATTASNAE 60
            P   Y+YA +L + LKK HA G YK LVFY+EACESGS+FEG LP+ +NIYATTA+NA+
Sbjct: 126 FPELDYLYAKDLAEALKKMHARGKYKKLVFYVEACESGSMFEG-LPKDINIYATTAANAD 184

Query: 61  ESSWGTYCPGEIPGPPPEYSTCLGDLYSIAWMEDSDIHNLRTETLHQQYELVKTRTASYN 120
           ESSWGTYC      P PE  TCLGDL+S+ WMEDSD H+L  ETL QQ+ELVK RT    
Sbjct: 185 ESSWGTYC------PDPEDGTCLGDLFSVNWMEDSDDHDLSKETLEQQFELVKNRTT--- 235

Query: 121 SYGSHVMQYGDIGLSKNNLFTYLGT 145
             GSHVMQYGD  + +  +  + GT
Sbjct: 236 --GSHVMQYGDKSIPQLPVSLFQGT 258

Members of this family are asparaginyl peptidases. The blood fluke parasite Schistosoma mansoni has at least five Clan CA cysteine peptidases in its digestive tract including cathepsins B (2 isoforms), C, F and L. All have been recombinantly expressed as active enzymes, albeit in various stages of activation. In addition, a Clan CD peptidase, termed asparaginyl endopeptidase or 'legumain' has been identified. This has formerly been characterized as a 'haemoglobinase', but this term is probably incorrect. Two cDNAs have been described for Schistosoma mansoni legumain; one encodes an active enzyme whereas the active site cysteine residue encoded by the second cDNA is substituted by an asparagine residue. Both forms have been recombinantly expressed. Length = 258

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	309
KOG1348	477	consensus Asparaginyl peptidases [Posttranslationa	100.0
PF01650	256	Peptidase_C13: Peptidase C13 family; InterPro: IPR	100.0
KOG1349	309	consensus Gpi-anchor transamidase [Posttranslation	99.89
COG5206	382	GPI8 Glycosylphosphatidylinositol transamidase (GP	99.78
PF00656	248	Peptidase_C14: Caspase domain; InterPro: IPR011600	92.84

>KOG1348 consensus Asparaginyl peptidases [Posttranslational modification, protein turnover, chaperones]

Probab=100.00  E-value=3e-101  Score=725.07  Aligned_cols=306  Identities=61%  Similarity=1.059  Sum_probs=295.3

Q ss_pred             CCCCCCCCHHHHHHHHHHHHHcCCCCeeEEEEeeccccccccCCCCCCCcEEEEccCCCCCcccccCCCCCCCCCCCccc
Q 021702            1 MPTSRYIYADELIDVLKKKHASGNYKSLVFYLEACESGSIFEGLLPEGLNIYATTASNAEESSWGTYCPGEIPGPPPEYS   80 (309)
Q Consensus         1 ~P~~~~l~a~dL~~~l~~M~~~~~Y~~lvfyiEaC~SgSmf~~~lp~~~nIya~TAan~~EsS~a~yc~~~~~~~~~~~~   80 (309)
                      ||+++.|||+||+++|++||+.|+|++||||||||||||||||+||+|+|||||||||+.|||||+|||+++|.||+++.
T Consensus       172 mP~~~~l~akdlnevL~kmhk~k~Y~~mvfYlEACESGSmfegiLp~~lnIYatTAaNa~ESSwgtycp~~~psppse~~  251 (477)
T KOG1348|consen  172 MPTSPDLYAKDLNEVLKKMHKSKTYKKMVFYLEACESGSMFEGILPKNLNIYATTAANARESSWGTYCPGEYPSPPSEYS  251 (477)
T ss_pred             cCCCcchhHHHHHHHHHHHHhccchheEEEEeeeccCcchhhhhccCCCcEEEeecCCccccccceeCCCCCCCChhhcc
Confidence            89999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ccccchhhhhhcccccccccccccHHHHHHHHHhhhccCCCCCCCceeecCCccccccchhhcccCCCCCCCcccCCCCC
Q 021702           81 TCLGDLYSIAWMEDSDIHNLRTETLHQQYELVKTRTASYNSYGSHVMQYGDIGLSKNNLFTYLGTNPANDNYTFVDENSL  160 (309)
Q Consensus        81 tcLgD~fs~~wme~~d~~~~~~~Tl~~~f~~v~~~t~~~~~~~Shv~~yGd~~~~~~~l~~f~g~~~~~~~~~~~~~~~~  160 (309)
                      |||||+|||+||||+|.||+++|||.+||+.||++|+.....+||||||||..|+++.|..|||.+|+++++++. +.+.
T Consensus       252 tcLGDlySV~WmeDSd~hdL~kETL~qQYhlVK~rt~~s~s~gsHVmqyGd~~iske~l~lfqG~~pa~~nf~l~-~~s~  330 (477)
T KOG1348|consen  252 TCLGDLYSVNWMEDSDVHDLKKETLHQQYHLVKKRTNTSYSYGSHVMQYGDKTISKEKLMLFQGMKPANENFTLP-ASSH  330 (477)
T ss_pred             cccccceeeeeeccCccccchHHHHHHHHHHHHHhcCCCCCCcceeeecCcchhhHHHHHHHcCCCcccCCCCCC-ccCc
Confidence            999999999999999999999999999999999999976668889999999999999999999999999998865 4445


Q ss_pred             CcccccccccchhHHHHHHHHHcCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCccccccccCCCCCCCc
Q 021702          161 RPASKAVNQRDADLLHFWDKYRKAPEGTPRKAEAQKQFFEAMSHRMHVDHSIKLIGKLLFGIEKGPEILNTVRPAGQPLV  240 (309)
Q Consensus       161 ~~~~~~v~srDa~L~~L~~k~~~a~~~~~~k~~a~~el~~~l~~R~~id~~v~~I~~~l~g~~~~~~~l~~~~~~g~~l~  240 (309)
                      .+++..|||||+||+|||+|++++++++.++.+++++|.+++.+|++||++|..|+.++||. .++.+|+.+|+.|+|++
T Consensus       331 ~~~s~~~n~rD~~L~~l~~k~rka~dgs~~s~e~~k~i~~~~~hR~~id~sV~~I~~llf~~-~~~~~l~~vr~~g~Plv  409 (477)
T KOG1348|consen  331 KSPSGLTNQRDAPLLHLWRKYRKANDGSAESRELQKEILRHKDHRKHIDKSVRLIVSLLFGS-EGEAVLNQVRSEGQPLV  409 (477)
T ss_pred             CCccccCCCCCccHHHHHHHHhcCcccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCc-chHHHHHHhhcCCCCcc
Confidence            56778999999999999999999999998999999999999999999999999999999997 55779999999999999


Q ss_pred             CccchHHHHHHHHHhhcCCCchhhhhHHHHHHHHHcCCCCHHHHHHHHHhhhcCCCCCCCCCcccCCC
Q 021702          241 DDWGCLKSLVRTFESHCGALSQYGMKHMRSLANICNTGIGKEKMAEASAQACENIPSGPWSSLDKGFS  308 (309)
Q Consensus       241 ~d~dCyk~~V~~Fe~~Cg~l~eY~lk~~~~laNLC~~g~~~~~i~~Ai~~~C~~~~~~~~~~~~~~~~  308 (309)
                      +||+|++.+|++|++|||+++||||||+|+|+||||.|++.++|..|+.++|..++..+|+++..|||
T Consensus       410 ddw~C~k~~v~~F~~hCg~~~~YglKh~~~~aN~Cn~g~~~e~~~~A~~~aC~~~~~~~~~~~~~gfs  477 (477)
T KOG1348|consen  410 DDWDCLKSAVRHFETHCGSTYEYGLKHMRVLANMCNKGVPLEQIELAMDQACLGIYTEPWSSLRRGFS  477 (477)
T ss_pred             chHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHhcCccHHHHHHHHHhHhcCCccccchhhcccCC
Confidence            99999999999999999999999999999999999999999999999999999999999999999997

>PF01650 Peptidase_C13: Peptidase C13 family; InterPro: IPR001096 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families

Probab=100.00  E-value=2e-38  Score=294.43  Aligned_cols=133  Identities=50%  Similarity=0.806  Sum_probs=127.6

Q ss_pred             CCCCCCCCHHHHHHHHHHHHHcCCCCeeEEEEeeccccccccCCCCCCCcEEEEccCCCCCcccccCCCCCCCCCCCccc
Q 021702            1 MPTSRYIYADELIDVLKKKHASGNYKSLVFYLEACESGSIFEGLLPEGLNIYATTASNAEESSWGTYCPGEIPGPPPEYS   80 (309)
Q Consensus         1 ~P~~~~l~a~dL~~~l~~M~~~~~Y~~lvfyiEaC~SgSmf~~~lp~~~nIya~TAan~~EsS~a~yc~~~~~~~~~~~~   80 (309)
                      ||+.+.|++.||+++|++|+++++|||||||||||+|||||++ |++++|||++|||+++|+|||+||+      +++++
T Consensus       124 ~~~~~~l~~~~L~~~L~~m~~~~~y~~lv~~veaC~SGs~~~~-L~~~~nv~~iTAa~~~e~Sy~~~~~------~~~~~  196 (256)
T PF01650_consen  124 FPDGEELTADDLADALDKMHEKKRYKKLVFVVEACYSGSFFEG-LLKSPNVYVITAANADESSYGCYCS------DDSIG  196 (256)
T ss_pred             CCCcccccHHHHHHHHHHHHhhCCcceEEEEEecccccchhhc-cCCCCCEEEEecCCccccccccccc------ccccc
Confidence            6878899999999999999999999999999999999999999 7889999999999999999999993      39999


Q ss_pred             ccccchhhhhhcccccccccccccHHHHHHHHHhhhccCCCCCCCceeecCCccccccchhhccc
Q 021702           81 TCLGDLYSIAWMEDSDIHNLRTETLHQQYELVKTRTASYNSYGSHVMQYGDIGLSKNNLFTYLGT  145 (309)
Q Consensus        81 tcLgD~fs~~wme~~d~~~~~~~Tl~~~f~~v~~~t~~~~~~~Shv~~yGd~~~~~~~l~~f~g~  145 (309)
                      +||||+||++||++++.++++.+||.+||+.|+++|.     +|||++|||.++.+++|++|+|.
T Consensus       197 ~~l~d~fs~~~m~~~~~~~~~~~Tl~~~f~~v~~~~~-----~shv~~~gd~s~~~~~v~~f~g~  256 (256)
T PF01650_consen  197 TYLGDAFSYNWMEDSDSHPLSEETLDDQFEYVKRKTT-----GSHVQQYGDPSIPQLPVSEFQGT  256 (256)
T ss_pred             cEeHHHHHHHhhhhhccCCccccCHHHHHHHHHHhcc-----cchHHhcCCCCccccCHHHhcCC
Confidence            9999999999999999888999999999999999998     99999999999999999999994

Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Cysteine peptidases have characteristic molecular topologies, which can be seen not only in their three-dimensional structures, but commonly also in the two-dimensional structures. These are peptidases in which the nucleophile is the sulphydryl group of a cysteine residue. Cysteine proteases are divided into clans (proteins which are evolutionary related), and further sub-divided into families, on the basis of the architecture of their catalytic dyad or triad []. This group of cysteine peptidases belong to the MEROPS peptidase family C13 (legumain family, clan CD). A type example is legumain from Canavalia ensiformis (Jack bean, Horse bean). The blood fluke parasite Schistosoma mansoni has two cysteine proteases in its digestive tract, one a cathepsin B-like protease, the other termed hemoglobinase [, ]. The latter has been hard to purify, free of cathepsin B, and expressed forms in Escherichia coli prove to be inactive, suggesting that hemoglobinase may act in association with cathepsin B [, ]. Plant vacuolar processing enzyme and legumain from legumes [] have been shown to have sequence and functional similarity to hemoglobinase. The catalytic residues of the family are currently unknown, but sequence alignments reveal one totally conserved cysteine and two totally conserved histidines.; GO: 0004197 cysteine-type endopeptidase activity, 0006508 proteolysis

>KOG1349 consensus Gpi-anchor transamidase [Posttranslational modification, protein turnover, chaperones]

Probab=99.89  E-value=5.4e-24  Score=194.01  Aligned_cols=132  Identities=17%  Similarity=0.306  Sum_probs=119.5

Q ss_pred             CCCCCCCHHHHHHHHHHHHHcCCCCeeEEEEeeccccccccCCCCCCCcEEEEccCCCCCcccccCCCCCCCCCCCcccc
Q 021702            2 PTSRYIYADELIDVLKKKHASGNYKSLVFYLEACESGSIFEGLLPEGLNIYATTASNAEESSWGTYCPGEIPGPPPEYST   81 (309)
Q Consensus         2 P~~~~l~a~dL~~~l~~M~~~~~Y~~lvfyiEaC~SgSmf~~~lp~~~nIya~TAan~~EsS~a~yc~~~~~~~~~~~~t   81 (309)
                      -+.++|+.+||+++|+|||+++||+||+|+|++|++.|||+.+..  |||+|+.+|..+|+||+++.|       ++||+
T Consensus       157 qd~eelts~dLadai~qm~e~~Ryneil~miDTCQaasly~~~~s--PNVLav~SS~~ge~SySh~~d-------~~Igv  227 (309)
T KOG1349|consen  157 QDAEELTSDDLADAIQQMWEKKRYNEILFMIDTCQAASLYERFYS--PNVLAVASSLVGEPSYSHHSD-------SDIGV  227 (309)
T ss_pred             ccHHHhhhHHHHHHHHHHHHhhhhceEEEEeeccchHHHHHhhcC--CCeEEEeecccCCcccccCCC-------cccce
Confidence            356789999999999999999999999999999999999999754  699999999999999999998       89999


Q ss_pred             cccchhhhhhccccccc-ccccccHHHHHHHHHhhhccCCCCCCCceeecCC---ccccccchhhcccCC
Q 021702           82 CLGDLYSIAWMEDSDIH-NLRTETLHQQYELVKTRTASYNSYGSHVMQYGDI---GLSKNNLFTYLGTNP  147 (309)
Q Consensus        82 cLgD~fs~~wme~~d~~-~~~~~Tl~~~f~~v~~~t~~~~~~~Shv~~yGd~---~~~~~~l~~f~g~~~  147 (309)
                      .+.|+|++..+++.++. +....||+++|+.+.++.+     +||+....|+   ...+.++++|||...
T Consensus       228 ~vIDrftyy~l~flek~~~~~~~~l~dl~~s~~~~~~-----~St~gvr~dl~~r~~~~v~itDFFg~vr  292 (309)
T KOG1349|consen  228 YVIDRFTYYTLEFLEKGIGAKNRTLQDLFDSCPKRLL-----GSTPGVRTDLYQRDPKDVLITDFFGSVR  292 (309)
T ss_pred             eeeccchHHHHHHHHhcccchhhhHHHHHHhCChhhh-----cCCcCcccccccCCcccceeeeecccce
Confidence            99999999999999874 4455689999999999998     9999887775   677899999999743

>COG5206 GPI8 Glycosylphosphatidylinositol transamidase (GPIT), subunit GPI8 [Posttranslational modification, protein turnover, chaperones]

Probab=99.78  E-value=1.7e-19  Score=165.80  Aligned_cols=130  Identities=15%  Similarity=0.228  Sum_probs=114.8

Q ss_pred             CCCCCCHHHHHHHHHHHHHcCCCCeeEEEEeeccccccccCCCCCCCcEEEEccCCCCCcccccCCCCCCCCCCCccccc
Q 021702            3 TSRYIYADELIDVLKKKHASGNYKSLVFYLEACESGSIFEGLLPEGLNIYATTASNAEESSWGTYCPGEIPGPPPEYSTC   82 (309)
Q Consensus         3 ~~~~l~a~dL~~~l~~M~~~~~Y~~lvfyiEaC~SgSmf~~~lp~~~nIya~TAan~~EsS~a~yc~~~~~~~~~~~~tc   82 (309)
                      +-++++.+||+++|++||++|||+|++|+|++|++.+|+..++.  |||+|+++|.-++|||+++.|       .+||+-
T Consensus       158 daeemtseDladai~ql~~~kRyNeIlfmiDTCQAnaly~k~ys--PNvLavgsSeig~ssyShhsd-------~~Igva  228 (382)
T COG5206         158 DAEEMTSEDLADAISQLAAKKRYNEILFMIDTCQANALYDKSYS--PNVLAVGSSEIGQSSYSHHSD-------SLIGVA  228 (382)
T ss_pred             cHHHhhhHHHHHHHHHHHHhhhhceEEEEeeccccchhhhhccC--CceEEEeccccCCccccccch-------hhhhHH
Confidence            45689999999999999999999999999999999999998765  599999999999999999998       899999


Q ss_pred             ccchhhhhhcccccc-cccccccHHHHHHHHHhhhccCCCCCCCceeec---CCccccccchhhcccC
Q 021702           83 LGDLYSIAWMEDSDI-HNLRTETLHQQYELVKTRTASYNSYGSHVMQYG---DIGLSKNNLFTYLGTN  146 (309)
Q Consensus        83 LgD~fs~~wme~~d~-~~~~~~Tl~~~f~~v~~~t~~~~~~~Shv~~yG---d~~~~~~~l~~f~g~~  146 (309)
                      +.|+|++.++++.++ ...++.||++++........     +|||...-   |.+.++..+++|||+.
T Consensus       229 VIDrFty~~l~fle~id~~skltlqDL~~s~n~e~i-----hS~~gv~~~~fdr~p~d~litDFF~nV  291 (382)
T COG5206         229 VIDRFTYFFLKFLEKIDIGSKLTLQDLLASLNKEPI-----HSHVGVRELVFDRRPSDFLITDFFANV  291 (382)
T ss_pred             HhhcchHHHHHHHhhcCcCCeeEHHHHHHhcCcccc-----cCCCCcccccccCCccceeehHhhhhh
Confidence            999999999888876 34679999999999988876     99997543   3455667789999864

>PF00656 Peptidase_C14: Caspase domain; InterPro: IPR011600 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families

Probab=92.84  E-value=0.18  Score=45.29  Aligned_cols=92  Identities=25%  Similarity=0.369  Sum_probs=64.4

Q ss_pred             HHHHHHHHHHcC-CCC-eeEEEEeeccccccccCCC----------------------------CCCCcEEEEccCCCCC
Q 021702           12 LIDVLKKKHASG-NYK-SLVFYLEACESGSIFEGLL----------------------------PEGLNIYATTASNAEE   61 (309)
Q Consensus        12 L~~~l~~M~~~~-~Y~-~lvfyiEaC~SgSmf~~~l----------------------------p~~~nIya~TAan~~E   61 (309)
                      +.+.|..+..+. .=+ + ||++++|+||.+..+..                            +...+++.++|+.++|
T Consensus       103 ~~~~l~~~~~~~~~~~~k-~~ilD~C~sg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~as~~~~  181 (248)
T PF00656_consen  103 LDDELRDLLCKSLPKKPK-LFILDCCRSGGFIDGLSSSSGESSKREERKLSSSIPPEDPNRSDVPSPSGFIVLSASRPGQ  181 (248)
T ss_dssp             HHHHTSTTTTGGGTTS-E-EEEEESESSSBTBCEEEEEESSSTSS-EECHCCCCCCSSCCSEEEETTTSEEEEESSSTTB
T ss_pred             HHHHHhhhhhhhccCCcc-EEeeccccCCccCCccccccccccccccccccccccccccccccccCCCCcEEEEeccccc
Confidence            455555555541 112 4 99999999999877311                            1345899999999999


Q ss_pred             cccccCCCCCCCCCCCcccccccchhhhhhccccccc------ccccccHHHHHHHHHhhhc
Q 021702           62 SSWGTYCPGEIPGPPPEYSTCLGDLYSIAWMEDSDIH------NLRTETLHQQYELVKTRTA  117 (309)
Q Consensus        62 sS~a~yc~~~~~~~~~~~~tcLgD~fs~~wme~~d~~------~~~~~Tl~~~f~~v~~~t~  117 (309)
                      .||..  +           ..=+-+|+.++++-+...      .....+|.+++..|++++.
T Consensus       182 ~s~e~--~-----------~~~~g~ft~~L~~~L~~~~~~~~~~~~~~~l~~~~~~v~~~~~  230 (248)
T PF00656_consen  182 TSYED--S-----------PGSGGLFTYALLEALKGNAADDPNQSWDELLEELLTEVNQKVA  230 (248)
T ss_dssp             CEEEE--C-----------TTTEEHHHHHHHHHHHHHTTTSTTCCTTSBHHHHHHHHHHHHH
T ss_pred             eeecc--c-----------CccCHHHHHHHHHHHHhhcccccchhHHHHHHHHHHHHHhHCC
Confidence            99887  2           233446899988877432      2336899999999998873

Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Cysteine peptidases have characteristic molecular topologies, which can be seen not only in their three-dimensional structures, but commonly also in the two-dimensional structures. These are peptidases in which the nucleophile is the sulphydryl group of a cysteine residue. Cysteine proteases are divided into clans (proteins which are evolutionary related), and further sub-divided into families, on the basis of the architecture of their catalytic dyad or triad []. This group of sequences represent the p20 (20kDa) and p10 (10kDa) subunits of caspases, which together form the catalytic domain of the caspase and are derived from the p45 (45 kDa) precursor (IPR002398 from INTERPRO) []. Caspases (Cysteine-dependent ASPartyl-specific proteASE) are cysteine peptidases that belong to the MEROPS peptidase family C14 (caspase family, clan CD) based on the architecture of their catalytic dyad or triad []. Caspases are tightly regulated proteins that require zymogen activation to become active, and once active can be regulated by caspase inhibitors. Activated caspases act as cysteine proteases, using the sulphydryl group of a cysteine side chain for catalysing peptide bond cleavage at aspartyl residues in their substrates. The catalytic cysteine and histidine residues are on the p20 subunit after cleavage of the p45 precursor. Caspases are mainly involved in mediating cell death (apoptosis) [, , ]. They have two main roles within the apoptosis cascade: as initiators that trigger the cell death process, and as effectors of the process itself. Caspase-mediated apoptosis follows two main pathways, one extrinsic and the other intrinsic or mitochondrial-mediated. The extrinsic pathway involves the stimulation of various TNF (tumour necrosis factor) cell surface receptors on cells targeted to die by various TNF cytokines that are produced by cells such as cytotoxic T cells. The activated receptor transmits the signal to the cytoplasm by recruiting FADD, which forms a death-inducing signalling complex (DISC) with caspase-8. The subsequent activation of caspase-8 initiates the apoptosis cascade involving caspases 3, 4, 6, 7, 9 and 10. The intrinsic pathway arises from signals that originate within the cell as a consequence of cellular stress or DNA damage. The stimulation or inhibition of different Bcl-2 family receptors results in the leakage of cytochrome c from the mitochondria, and the formation of an apoptosome composed of cytochrome c, Apaf1 and caspase-9. The subsequent activation of caspase-9 initiates the apoptosis cascade involving caspases 3 and 7, among others. At the end of the cascade, caspases act on a variety of signal transduction proteins, cytoskeletal and nuclear proteins, chromatin-modifying proteins, DNA repair proteins and endonucleases that destroy the cell by disintegrating its contents, including its DNA. The different caspases have different domain architectures depending upon where they fit into the apoptosis cascades, however they all carry the catalytic p10 and p20 subunits. Caspases can have roles other than in apoptosis, such as caspase-1 (interleukin-1 beta convertase) (3.4.22.36 from EC), which is involved in the inflammatory process. The activation of apoptosis can sometimes lead to caspase-1 activation, providing a link between apoptosis and inflammation, such as during the targeting of infected cells. Caspases may also be involved in cell differentiation [].; GO: 0004197 cysteine-type endopeptidase activity, 0006508 proteolysis; PDB: 1M72_C 2NN3_C 3V4L_A 3IBF_B 2QLF_D 2QLB_C 3IBC_B 2QL9_A 3R5K_B 3H1P_A ....

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	309
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	1e-04
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	2e-04

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 42.9 bits (100), Expect = 1e-04
 Identities = 45/316 (14%), Positives = 81/316 (25%), Gaps = 121/316 (38%)

Query: 3   TSRYIYADELIDVLKKKHASGNYKSLVFYLEACESGSIF-------EGLLPE-------- 47
           T+R+    + +      H S ++ S+    +  E  S+           LP         
Sbjct: 271 TTRFKQVTDFLSAATTTHISLDHHSMTLTPD--EVKSLLLKYLDCRPQDLPREVLTTNPR 328

Query: 48  GLNIYATTASNAEESSWGTY--------------CPGEIPGPPPEYSTCLGDL------- 86
            L+I A +  +   ++W  +                  +   P EY      L       
Sbjct: 329 RLSIIAESIRD-GLATWDNWKHVNCDKLTTIIESSLNVL--EPAEYRKMFDRLSVFPPSA 385

Query: 87  ------YSIAWMEDSD--------------------------IHNLRTE---------TL 105
                  S+ W +                             I ++  E          L
Sbjct: 386 HIPTILLSLIWFDVIKSDVMVVVNKLHKYSLVEKQPKESTISIPSIYLELKVKLENEYAL 445

Query: 106 HQ----QYELVKTRTAS-----------YNSYGSHVMQYGDIGLSKNNLFT--YLGTNPA 148
           H+     Y + KT  +            Y+  G H+         +  LF   +L     
Sbjct: 446 HRSIVDHYNIPKTFDSDDLIPPYLDQYFYSHIGHHLKNIEHPE--RMTLFRMVFL----- 498

Query: 149 NDNYTFVDENSLRPASKAVNQRD--ADLLHFWDKYRK-------APEGTPRKAEAQKQFF 199
             ++ F+ E  +R  S A N      + L     Y+          E   R   A   F 
Sbjct: 499 --DFRFL-EQKIRHDSTAWNASGSILNTLQQLKFYKPYICDNDPKYE---RLVNAILDFL 552

Query: 200 EAMSHRMHVDHSIKLI 215
             +   +       L+
Sbjct: 553 PKIEENLICSKYTDLL 568

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 42.1 bits (98), Expect = 2e-04
 Identities = 31/218 (14%), Positives = 56/218 (25%), Gaps = 70/218 (32%)

Query: 98  HNLRTETLHQQY-----------ELVK----------TRTASYNSYGSHVMQYGDIGLSK 136
           H++  ET   QY             V            ++        H++   D     
Sbjct: 5   HHMDFETGEHQYQYKDILSVFEDAFVDNFDCKDVQDMPKSILSKEEIDHIIMSKDAVSGT 64

Query: 137 NNLFTYLGTNPANDNYTFVDENSLRPASKAVNQRDADLLHFWDKYRKAPEGTPRKAEAQK 196
             LF  L +        FV+E         V + +   L      +       R+     
Sbjct: 65  LRLFWTLLSKQEEMVQKFVEE---------VLRINYKFL--MSPIKT----EQRQPSMMT 109

Query: 197 QFFEAMSHRMHVDHSIKLIGKLLFGIEKGPEILNTVRPAGQPLVDDWGCLKSLVRTFESH 256
           + +     R++ D+ +           K     N  R   QP +     L+  +      
Sbjct: 110 RMYIEQRDRLYNDNQV---------FAK----YNVSRL--QPYLK----LRQALLELRPA 150

Query: 257 CGALSQYGMKHMRSLANICNTGIGKEKMAEASAQACEN 294
              +   G+            G GK  +A      C +
Sbjct: 151 KN-VLIDGVL-----------GSGKTWVA---LDVCLS 173

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	309
3bij_A	285	Uncharacterized protein GSU0716; alpha-beta protei	97.35
4af8_A	367	Metacaspase MCA2; hydrolase, cysteine peptidase, c	93.83
3uoa_B	390	Mucosa-associated lymphoid tissue lymphoma transl	93.8
4f6o_A	350	Metacaspase-1; rossmann fold, hydrolase; HET: DFH;	89.73

>3bij_A Uncharacterized protein GSU0716; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.50A {Geobacter sulfurreducens pca}

Probab=97.35  E-value=0.00022  Score=65.98  Aligned_cols=118  Identities=12%  Similarity=0.099  Sum_probs=82.2

Q ss_pred             CCCCCCCHHHHHHHHHHHHHcCCCCeeEEEEeeccccccccC----------------------CCC-------------
Q 021702            2 PTSRYIYADELIDVLKKKHASGNYKSLVFYLEACESGSIFEG----------------------LLP-------------   46 (309)
Q Consensus         2 P~~~~l~a~dL~~~l~~M~~~~~Y~~lvfyiEaC~SgSmf~~----------------------~lp-------------   46 (309)
                      |.+..|..++|.+.|+.+   ++-+++++++|+|+||++..+                      .+|             
T Consensus       105 p~D~~i~~~~l~~~l~~l---~~~~~~~vilD~C~SG~~~~~~p~~~~~~~~~~~~~~g~~~~r~~~~~~~~~~~~~~~~  181 (285)
T 3bij_A          105 LFDGELIDDELYALLGKF---AAGVRVLVFSDSCHSGTVVKMAYYNGTTAARSAGPDEGEIRYRAMPQSVAMRTYRANRE  181 (285)
T ss_dssp             CSSSEEEHHHHHHHHTTS---CSSCEEEEEEECCCCCCHHHHHHTTC-------------CEESBCCHHHHHHHHHHTHH
T ss_pred             ecCCCccHHHHHHHHHhc---cCCCeEEEEEecCCCCccccccccccccccccccccccccceeecCchhhhhhhhcchh
Confidence            433446677888887665   335789999999999998762                      111             


Q ss_pred             ----------------CCCcEEEEccCCCCCcccccCCCCCCCCCCCcccccccchhhhhhcccccccccccccHHHHHH
Q 021702           47 ----------------EGLNIYATTASNAEESSWGTYCPGEIPGPPPEYSTCLGDLYSIAWMEDSDIHNLRTETLHQQYE  110 (309)
Q Consensus        47 ----------------~~~nIya~TAan~~EsS~a~yc~~~~~~~~~~~~tcLgD~fs~~wme~~d~~~~~~~Tl~~~f~  110 (309)
                                      ...+++.++|+.++|.||-.          ..     .-.||.+.++-+... ....|+.++++
T Consensus       182 ~~~~l~~~~~~~~~~~~~~~~i~lsa~~~~q~A~e~----------~~-----~G~FT~aLl~~L~~~-~~~~s~~~l~~  245 (285)
T 3bij_A          182 FYDTIQQKTKKVDLADVKASILLISGCQDNQLSQDG----------AF-----NGAFTGQLLRVWKNG-LYKGSYRSFHK  245 (285)
T ss_dssp             HHHHHHHHCCCCCTTTCSSEEEEEESSCTTSCCEEC----------SS-----SCHHHHHHHHHHGGG-TCCSCHHHHHH
T ss_pred             HHHHHhhhcccccccCCCCCEEEEEeCCCCcccccc----------cc-----CCHHHHHHHHHHhhC-CCCcCHHHHHH
Confidence                            23468999999999999752          11     146999998866532 24579999999


Q ss_pred             HHHhhhccCCCCCCCceeecCCccccccchhhcccC
Q 021702          111 LVKTRTASYNSYGSHVMQYGDIGLSKNNLFTYLGTN  146 (309)
Q Consensus       111 ~v~~~t~~~~~~~Shv~~yGd~~~~~~~l~~f~g~~  146 (309)
                      .|++.+..    ..|++.||..+    .-..|++..
T Consensus       246 ~v~~~~~~----~Q~P~~~~~g~----~~~~Fl~~~  273 (285)
T 3bij_A          246 AIVRRMPP----DQTPNFFTAGT----PDPAFLKQR  273 (285)
T ss_dssp             HHHHHSCT----TCCCEEEEEES----CCHHHHHSC
T ss_pred             HHHHhcCC----CCCcceeCCCC----CCcccccCC
Confidence            99998763    78888887532    224566543

>4af8_A Metacaspase MCA2; hydrolase, cysteine peptidase, caspase/hemoglobin fold; 1.40A {Trypanosoma brucei} PDB: 4afp_A 4afv_A 4afr_A

Probab=93.83  E-value=0.094  Score=50.31  Aligned_cols=98  Identities=15%  Similarity=0.100  Sum_probs=64.7

Q ss_pred             CCCHHHHHHHH-HHHHHcCCCCeeEEEEeeccccccccCCCC-------------------------CCCcEEEEccCCC
Q 021702            6 YIYADELIDVL-KKKHASGNYKSLVFYLEACESGSIFEGLLP-------------------------EGLNIYATTASNA   59 (309)
Q Consensus         6 ~l~a~dL~~~l-~~M~~~~~Y~~lvfyiEaC~SgSmf~~~lp-------------------------~~~nIya~TAan~   59 (309)
                      .|..+||.+.| +.+   .+=.++++++|+|+||++.+  ||                         ..-+|+.++|+..
T Consensus       206 ~I~ddeL~~lLv~~l---~~g~~v~vIlD~ChSGt~~d--lp~~~~~r~~~~~~~~~~~~~~~~~~~~~~~vi~~Sac~d  280 (367)
T 4af8_A          206 CIVDDDIHKLLFSRL---PEKVRLTAVFDCGHSGSIMD--LPFTYVCSGGEQASGTPHMKRIREGNDVLGDVMMISGCAD  280 (367)
T ss_dssp             CEEHHHHHHHHTTTC---CTTCEEEEEEECTTCCCCTT--CSEEEECCTTCCTTSCCCCEECSSCCCCCSEEEEEEEECC
T ss_pred             CccHHHHHHHHHHhc---cCCCEEEEEEeCCCCCcccc--cccccccccccccccchhhhhhccCCCCCCCEEEEEecCC
Confidence            35556666653 222   22369999999999999976  22                         1235788888888


Q ss_pred             CCcccccCCCCCCCCCCCcc---cccccchhhhhhcccccccccccccHHHHHHHHHhhhc
Q 021702           60 EESSWGTYCPGEIPGPPPEY---STCLGDLYSIAWMEDSDIHNLRTETLHQQYELVKTRTA  117 (309)
Q Consensus        60 ~EsS~a~yc~~~~~~~~~~~---~tcLgD~fs~~wme~~d~~~~~~~Tl~~~f~~v~~~t~  117 (309)
                      .|.|.-..-.       ..+   +..=.-.||+++++-+..  .+..|..++++.++....
T Consensus       281 ~QtSad~~~~-------~~f~~g~~~~~GafTyali~~L~~--~~~~Ty~~Ll~~vr~~l~  332 (367)
T 4af8_A          281 EQTSADVKNT-------ATFGTGSTGAGGAATQCITCMLMN--NQSLSYGKLLIETRDMLK  332 (367)
T ss_dssp             CSCCCCCC--------------CCCBCBSHHHHHHHHHHHC--CSCCBHHHHHHHHHHHHH
T ss_pred             CCchhhhhcc-------ccccccccCcccHHHHHHHHHHHh--CCCCCHHHHHHHHHHHHH
Confidence            8888653210       001   113346899999988753  467799999998887664

>3uoa_B Mucosa-associated lymphoid tissue lymphoma transl protein 1; paracaspase, lymphoma, NF-KB signalling, caspase fold, immun fold, hydrolase-hydrolase inhibitor complex; 1.75A {Homo sapiens} PDB: 3uo8_B 3v55_A 3v4l_A* 3v4o_A*

Probab=93.80  E-value=0.29  Score=47.28  Aligned_cols=92  Identities=11%  Similarity=0.142  Sum_probs=66.3

Q ss_pred             CCHHHHHHHHHHHHHcCCCCeeEEEEeeccccccccC------CCCCCCcEEEEccCCCCCcccccCCCCCCCCCCCccc
Q 021702            7 IYADELIDVLKKKHASGNYKSLVFYLEACESGSIFEG------LLPEGLNIYATTASNAEESSWGTYCPGEIPGPPPEYS   80 (309)
Q Consensus         7 l~a~dL~~~l~~M~~~~~Y~~lvfyiEaC~SgSmf~~------~lp~~~nIya~TAan~~EsS~a~yc~~~~~~~~~~~~   80 (309)
                      |..++|.+.|+..    .=|.-||+|+||++|..|.+      .+|...|++...|+.+++-||-.--+       +.-|
T Consensus       103 isl~~Ll~~l~~~----~~K~kL~ILDACrg~~~~~~~~~~~~~ip~~ad~Li~yAT~pG~~A~r~~~d-------~~~g  171 (390)
T 3uoa_B          103 LCVQNILKLMQEK----ETGLNVFLLDMCRKRNDYDDTIPILDALKVTANIVFGYATCQGAEAFEIQHS-------GLAN  171 (390)
T ss_dssp             EEHHHHHHHHHHT----TCSEEEEEEESCCCCCTTCCCCCCCCCCCCCSCEEEEESSCTTCCCEECSSC-------TTCC
T ss_pred             eeHHHHHHHHHhc----CCCceEEEEECCCCCCcccccccccccCcccCCcEEEEEcCCCcEeeecCCC-------CCCC
Confidence            5556666655532    34567999999999755542      35666789999999999999876532       2223


Q ss_pred             ccccchhhhhhcccccccccccccHHHHHHHHHhhhc
Q 021702           81 TCLGDLYSIAWMEDSDIHNLRTETLHQQYELVKTRTA  117 (309)
Q Consensus        81 tcLgD~fs~~wme~~d~~~~~~~Tl~~~f~~v~~~t~  117 (309)
                          -+|+.+..+-+..    ..+|.++|..|.+++.
T Consensus       172 ----S~FtqaL~e~L~~----~~dl~~LLt~Vn~~Va  200 (390)
T 3uoa_B          172 ----GIFMKFLKDRLLE----DKKITVLLDEVAEDMG  200 (390)
T ss_dssp             ----CHHHHHHTTTTTC----SSCHHHHHHHHHHHHT
T ss_pred             ----CHHHHHHHHHHcc----CCCHHHHHHHHHHHHh
Confidence                3588888877653    6889999999999985

>4f6o_A Metacaspase-1; rossmann fold, hydrolase; HET: DFH; 1.68A {Saccharomyces cerevisiae}

Probab=89.73  E-value=0.28  Score=46.67  Aligned_cols=32  Identities=9%  Similarity=0.084  Sum_probs=24.9

Q ss_pred             cchhhhhhcccccccccccccHHHHHHHHHhhhc
Q 021702           84 GDLYSIAWMEDSDIHNLRTETLHQQYELVKTRTA  117 (309)
Q Consensus        84 gD~fs~~wme~~d~~~~~~~Tl~~~f~~v~~~t~  117 (309)
                      .-.||+++++-+..  .+..|..++++.++....
T Consensus       296 ~GAmTyafi~aL~~--~p~~tY~~Ll~~~r~~L~  327 (350)
T 4f6o_A          296 TGAMSHAFIKVMTL--QPQQSYLSLLQNMRKELA  327 (350)
T ss_dssp             CCHHHHHHHHHHHH--CCCCBHHHHHHHHHHHHT
T ss_pred             eehhHHHHHHHHHH--CCCCCHHHHHHHHHHHHH
Confidence            44688988887764  477899999999988764

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	309
g1qtn.1	242	Caspase-8 {Human (Homo sapiens) [TaxId: 9606]}	81.65