Citrus Sinensis ID: 021767

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------31
MAFSSSTTPTVAYFSCFNTFNEISSPLFKPPKLPLFWPWEKVKMGPLSASPMGFGTWAWGNQFLWGYQESMDSQLQQTFNLAVENGINLFDTADSYGTGRLNGKSEKLLGKFISEIPGQKQVQNNIVIATKFAAYPWRLTPGQFVNACRASLARLQIEQIGIGQLHWSTANYAPPQELALWNGLVAMYEKGLVRAVGVSNYGPNQLVKIHDYLTARGVPLCSAQVQFSLLSMGENQLEIKNICDSLGIRLISYSPLGLGMLTGKYTPSKLPRGPRALLFRQILPGLKPLLRSLKEIAERRGKTIPQLL
cccccccccccccccccccccccccccccccccccccccEEccccccccccccccccccccccccccccccHHHHHHHHHHHHHccccEEEcccccccccccccHHHHHHHHHHcccccccccccEEEEEccccccccccHHHHHHHHHHHHHHHccccccEEEEccccccccHHHHHHHHHHHHHHHHcccccEEEEccccHHHHHHHHHHHHHccccEEEccccccccccccccccHHHHHHHHccEEEEEcccccccccccccccccccccccccHHcccccHHHHHHHHHHHHHHHcccccccc
cccccccccccccccccccccccccccccccccccccEEEEccccccEEEEEEEcccccccccccccccccHHHHHHHHHHHHHccccEEEccccccccccccccHHHHHHHHHHccccccccccEEEEEEEccccccccHHHHHHHHHHHHHHHcccEEEEEEEccccccccHHHHHHHHHHHHHHHHcccEEEEEccccHHHHHHHHHHHHHHccccEEEEccccccccccHHHHHHHHHHHHcccEEEEEcccHHHHHHcccHHHccccccHHHHcHcccHHHHHHHHHHHHHHHHccccccEEc
mafsssttptvaYFSCFntfneissplfkppklplfwpwekvkmgplsaspmgfgtwawgNQFLWGYQESMDSQLQQTFNLAVENGINlfdtadsygtgrlngksEKLLGKFiseipgqkqvqNNIVIATkfaaypwrltpgqFVNACRASLARLQIEQIGigqlhwstanyappqELALWNGLVAMYEKGLVRAVgvsnygpnqlvKIHDYLtargvplcsAQVQFSLLSMGENQLEIKNICDSLGirlisysplglgmltgkytpsklprgprallFRQILPGLKPLLRSLKEIAERRgktipqll
mafsssttptVAYFSCFNTFNEISSPLFKPPKLPLFWPWEKVKMGPLSASPMGFGTWAWGNQFLWGYQESMDSQLQQTFNLAVENGINLFDTADSYGTGRLNGKSEKLLGKFISeipgqkqvqNNIVIATKFAAYPWRLTPGQFVNACRASLARLQIEQIGIGQLHWSTANYAPPQELALWNGLVAMYEKGLVRAVGVSNYGPNQLVKIHDYLTARGVPLCSAQVQFSLLSMGENQLEIKNICDSLGIRLISYSPLGLGMLTGKYTPSKLPRGPRALLFRQILPGLKPLLRSLKeiaerrgktipqll
MAFSSSTTPTVAYFSCFNTFNEISSplfkppklplfwpwEKVKMGPLSASPMGFGTWAWGNQFLWGYQESMDSQLQQTFNLAVENGINLFDTADSYGTGRLNGKSEKLLGKFISEIPGQKQVQNNIVIATKFAAYPWRLTPGQFVNACRASLARLQIEQIGIGQLHWSTANYAPPQELALWNGLVAMYEKGLVRAVGVSNYGPNQLVKIHDYLTARGVPLCSAQVQFSLLSMGENQLEIKNICDSLGIRLISYSPLGLGMLTGKYTPSKLPRGPRALLFRQILPGLKPLLRSLKEIAERRGKTIPQLL
*********TVAYFSCFNTFNEISSPLFKPPKLPLFWPWEKVKMGPLSASPMGFGTWAWGNQFLWGYQESMDSQLQQTFNLAVENGINLFDTADSYGTGRLNGKSEKLLGKFISEIPGQKQVQNNIVIATKFAAYPWRLTPGQFVNACRASLARLQIEQIGIGQLHWSTANYAPPQELALWNGLVAMYEKGLVRAVGVSNYGPNQLVKIHDYLTARGVPLCSAQVQFSLLSMGENQLEIKNICDSLGIRLISYSPLGLGMLTGKYTPSKLPRGPRALLFRQILPGLKPLLRS****************
************************************WPWEKVKMGPLSASPMGFGTWAWGNQFLWGYQESMDSQLQQTFNLAVENGINLFDTADSYGTGRLNGKSEKLLGKFISEIPGQKQVQNNIVIATKFAAYPWRLTPGQFVNACRASLARLQIEQIGIGQLHWSTANYAPPQELALWNGLVAMYEKGLVRAVGVSNYGPNQLVKIHDYLTARGVPLCSAQVQFSLLSMGENQLEIKNICDSLGIRLISYSPLGLGMLTGKYTPSKLPRGPRALLFRQILPGLKPLLRSLKEIAERRGKTIPQLL
*********TVAYFSCFNTFNEISSPLFKPPKLPLFWPWEKVKMGPLSASPMGFGTWAWGNQFLWGYQESMDSQLQQTFNLAVENGINLFDTADSYGTGRLNGKSEKLLGKFISEIPGQKQVQNNIVIATKFAAYPWRLTPGQFVNACRASLARLQIEQIGIGQLHWSTANYAPPQELALWNGLVAMYEKGLVRAVGVSNYGPNQLVKIHDYLTARGVPLCSAQVQFSLLSMGENQLEIKNICDSLGIRLISYSPLGLGMLTGKYTPSKLPRGPRALLFRQILPGLKPLLRSLKEIAERRGKTIPQLL
**********************ISSPLFKPPKLPLFWPWEKVKMGPLSASPMGFGTWAWGNQFLWGYQESMDSQLQQTFNLAVENGINLFDTADSYGTGRLNGKSEKLLGKFISEIPGQKQVQNNIVIATKFAAYPWRLTPGQFVNACRASLARLQIEQIGIGQLHWSTANYAPPQELALWNGLVAMYEKGLVRAVGVSNYGPNQLVKIHDYLTARGVPLCSAQVQFSLLSMGENQLEIKNICDSLGIRLISYSPLGLGMLTGKYTPSKLPRGPRALLFRQILPGLKPLLRSLKEIAERRGKTIPQLL
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
MAFSSSTTPTVAYFSCFNTFNEISSPLFKPPKLPLFWPWEKVKMGPLSASPMGFGTWAWGNQFLWGYQESMDSQLQQTFNLAVENGINLFDTADSYGTGRLNGKSEKLLGKFISEIPGQKQVQNNIVIATKFAAYPWRLTPGQFVNACRASLARLQIEQIGIGQLHWSTANYAPPQELALWNGLVAMYEKGLVRAVGVSNYGPNQLVKIHDYLTARGVPLCSAQVQFSLLSMGENQLEIKNICDSLGIRLISYSPLGLGMLTGKYTPSKLPRGPRALLFRQILPGLKPLLRSLKEIAERRGKTIPQLL
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query308 2.2.26 [Sep-21-2011]
Q56Y42365 Pyridoxal reductase,chlor yes no 0.990 0.835 0.785 1e-140
Q94A68377 Uncharacterized oxidoredu no no 0.831 0.679 0.398 4e-48
Q3L181337 Perakine reductase OS=Rau N/A no 0.685 0.626 0.293 8e-19
P63485323 Uncharacterized oxidoredu yes no 0.733 0.699 0.330 2e-18
P63484323 Uncharacterized oxidoredu yes no 0.733 0.699 0.330 2e-18
P80874331 General stress protein 69 yes no 0.642 0.598 0.324 2e-15
Q27955367 Voltage-gated potassium c yes no 0.922 0.773 0.266 3e-15
Q13303367 Voltage-gated potassium c yes no 0.922 0.773 0.266 4e-15
P62483367 Voltage-gated potassium c yes no 0.922 0.773 0.263 1e-14
P62482367 Voltage-gated potassium c yes no 0.922 0.773 0.263 1e-14
>sp|Q56Y42|PLR1_ARATH Pyridoxal reductase,chloroplastic OS=Arabidopsis thaliana GN=PLR1 PE=1 SV=1 Back     alignment and function desciption
 Score =  498 bits (1283), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 241/307 (78%), Positives = 266/307 (86%), Gaps = 2/307 (0%)

Query: 1   MAFSSSTTPTVAYFSCFNTFNEISSPLFKPPKLPLFWPWEKVKMGPLSASPMGFGTWAWG 60
           MA + STT T    +C N  + I++  FKP KLPLFWPW+KVKMGPLS SPMGFGTWAWG
Sbjct: 1   MALTLSTTKTFTNINCSNNTSNITT--FKPLKLPLFWPWQKVKMGPLSVSPMGFGTWAWG 58

Query: 61  NQFLWGYQESMDSQLQQTFNLAVENGINLFDTADSYGTGRLNGKSEKLLGKFISEIPGQK 120
           NQ LWGYQ SMD QLQQ F LA+ENGINLFDTADSYGTGRLNG+SE+LLGKFI E  G K
Sbjct: 59  NQLLWGYQTSMDDQLQQAFELALENGINLFDTADSYGTGRLNGQSERLLGKFIKESQGLK 118

Query: 121 QVQNNIVIATKFAAYPWRLTPGQFVNACRASLARLQIEQIGIGQLHWSTANYAPPQELAL 180
             QN +V+ATKFAAYPWRLT GQFVNACRASL RLQI+Q+GIGQLHWSTA+YAP QEL L
Sbjct: 119 GKQNEVVVATKFAAYPWRLTSGQFVNACRASLDRLQIDQLGIGQLHWSTASYAPLQELVL 178

Query: 181 WNGLVAMYEKGLVRAVGVSNYGPNQLVKIHDYLTARGVPLCSAQVQFSLLSMGENQLEIK 240
           W+GLV MYEKGLVRAVGVSNYGP QLVKIHDYL  RGVPLCSAQVQFSLLSMG+ QLEIK
Sbjct: 179 WDGLVQMYEKGLVRAVGVSNYGPQQLVKIHDYLKTRGVPLCSAQVQFSLLSMGKEQLEIK 238

Query: 241 NICDSLGIRLISYSPLGLGMLTGKYTPSKLPRGPRALLFRQILPGLKPLLRSLKEIAERR 300
           +ICD LGIRLISYSPLGLGMLTGKY+ SKLP GPR+LLFRQILPGL+PLL +L EIA++R
Sbjct: 239 SICDELGIRLISYSPLGLGMLTGKYSSSKLPTGPRSLLFRQILPGLEPLLLALSEIAKKR 298

Query: 301 GKTIPQL 307
           GKT+PQ+
Sbjct: 299 GKTMPQV 305
Catalyzes the reduction of pyridoxal (PL) with NADPH and oxidation of pyridoxine (PN) with NADP(+). Involved in the PLP salvage pathway.
Arabidopsis thaliana (taxid: 3702)
EC: 1EC: .EC: 1EC: .EC: 1EC: .EC: 6EC: 5
>sp|Q94A68|Y1669_ARATH Uncharacterized oxidoreductase At1g06690, chloroplastic OS=Arabidopsis thaliana GN=At1g06690 PE=1 SV=1 Back     alignment and function description
>sp|Q3L181|PERR_RAUSE Perakine reductase OS=Rauvolfia serpentina GN=PR PE=1 SV=1 Back     alignment and function description
>sp|P63485|Y2320_MYCBO Uncharacterized oxidoreductase Mb2320 OS=Mycobacterium bovis (strain ATCC BAA-935 / AF2122/97) GN=Mb2320 PE=3 SV=1 Back     alignment and function description
>sp|P63484|Y2298_MYCTU Uncharacterized oxidoreductase Rv2298/MT2355 OS=Mycobacterium tuberculosis GN=Rv2298 PE=3 SV=1 Back     alignment and function description
>sp|P80874|GS69_BACSU General stress protein 69 OS=Bacillus subtilis (strain 168) GN=yhdN PE=1 SV=2 Back     alignment and function description
>sp|Q27955|KCAB2_BOVIN Voltage-gated potassium channel subunit beta-2 OS=Bos taurus GN=KCNAB2 PE=1 SV=1 Back     alignment and function description
>sp|Q13303|KCAB2_HUMAN Voltage-gated potassium channel subunit beta-2 OS=Homo sapiens GN=KCNAB2 PE=1 SV=2 Back     alignment and function description
>sp|P62483|KCAB2_RAT Voltage-gated potassium channel subunit beta-2 OS=Rattus norvegicus GN=Kcnab2 PE=1 SV=1 Back     alignment and function description
>sp|P62482|KCAB2_MOUSE Voltage-gated potassium channel subunit beta-2 OS=Mus musculus GN=Kcnab2 PE=1 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query308
225455264367 PREDICTED: uncharacterized oxidoreductas 0.980 0.822 0.842 1e-146
30696358365 aldo/keto reductase family protein [Arab 0.990 0.835 0.785 1e-138
46931336365 At5g53580 [Arabidopsis thaliana] 0.990 0.835 0.781 1e-137
297796191361 aldo/keto reductase family protein [Arab 0.977 0.833 0.781 1e-137
255549134391 aldo/keto reductase, putative [Ricinus c 0.892 0.703 0.844 1e-136
449497466365 PREDICTED: uncharacterized oxidoreductas 0.957 0.808 0.772 1e-135
449456506365 PREDICTED: uncharacterized oxidoreductas 0.957 0.808 0.769 1e-135
399920240374 aldo-keto reductase [Rosa rugosa] 0.967 0.796 0.769 1e-134
224132648314 predicted protein [Populus trichocarpa] 0.860 0.843 0.860 1e-132
302143959330 unnamed protein product [Vitis vinifera] 0.844 0.787 0.875 1e-132
>gi|225455264|ref|XP_002273477.1| PREDICTED: uncharacterized oxidoreductase At1g06690, chloroplastic-like [Vitis vinifera] Back     alignment and taxonomy information
 Score =  524 bits (1349), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 257/305 (84%), Positives = 279/305 (91%), Gaps = 3/305 (0%)

Query: 5   SSTTPTVAYFSCFNTFNE--ISSPLFKPPKLPLFWPWEKVKMGPLSASPMGFGTWAWGNQ 62
           S+ +PT AYFS F+  N+  ISS  FKP KLP  WPW+KVKMGPL+ SPMGFGTWAWGNQ
Sbjct: 4   STLSPT-AYFSSFSPSNDSLISSSPFKPFKLPTLWPWQKVKMGPLTVSPMGFGTWAWGNQ 62

Query: 63  FLWGYQESMDSQLQQTFNLAVENGINLFDTADSYGTGRLNGKSEKLLGKFISEIPGQKQV 122
            LWGYQESMDS LQ+TFNLAVENGINLFDTADSYGTGRLNG+SEKLLGKFI E  GQKQ+
Sbjct: 63  LLWGYQESMDSDLQRTFNLAVENGINLFDTADSYGTGRLNGQSEKLLGKFIREFQGQKQI 122

Query: 123 QNNIVIATKFAAYPWRLTPGQFVNACRASLARLQIEQIGIGQLHWSTANYAPPQELALWN 182
           Q+NIVIATKFAAYPWRLTPGQFVNAC++SL R+Q+EQIGIGQLHWSTANYAP QELALW+
Sbjct: 123 QDNIVIATKFAAYPWRLTPGQFVNACKSSLDRMQLEQIGIGQLHWSTANYAPLQELALWD 182

Query: 183 GLVAMYEKGLVRAVGVSNYGPNQLVKIHDYLTARGVPLCSAQVQFSLLSMGENQLEIKNI 242
           GLVAMYEKGLVRAVGVSNYGP QLVKIHDYL ARGVPLCSAQVQFSLLS GE+Q+EIKNI
Sbjct: 183 GLVAMYEKGLVRAVGVSNYGPKQLVKIHDYLKARGVPLCSAQVQFSLLSKGEDQIEIKNI 242

Query: 243 CDSLGIRLISYSPLGLGMLTGKYTPSKLPRGPRALLFRQILPGLKPLLRSLKEIAERRGK 302
           C SLGIRLISYSPLGLGMLTGKYTPSKLPRGPRALLFRQILPGL+PLL SL+EIA++R K
Sbjct: 243 CGSLGIRLISYSPLGLGMLTGKYTPSKLPRGPRALLFRQILPGLEPLLNSLREIAQKRRK 302

Query: 303 TIPQL 307
           TIPQ+
Sbjct: 303 TIPQV 307

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|30696358|ref|NP_200170.2| aldo/keto reductase family protein [Arabidopsis thaliana] gi|75218023|sp|Q56Y42.1|PLR1_ARATH RecName: Full=Pyridoxal reductase,chloroplastic; Flags: Precursor gi|62320310|dbj|BAD94642.1| aldo/keto reductase-like protein [Arabidopsis thaliana] gi|332008997|gb|AED96380.1| aldo/keto reductase family protein [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|46931336|gb|AAT06472.1| At5g53580 [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|297796191|ref|XP_002865980.1| aldo/keto reductase family protein [Arabidopsis lyrata subsp. lyrata] gi|297311815|gb|EFH42239.1| aldo/keto reductase family protein [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|255549134|ref|XP_002515622.1| aldo/keto reductase, putative [Ricinus communis] gi|223545260|gb|EEF46767.1| aldo/keto reductase, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|449497466|ref|XP_004160409.1| PREDICTED: uncharacterized oxidoreductase At1g06690, chloroplastic-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|449456506|ref|XP_004145990.1| PREDICTED: uncharacterized oxidoreductase At1g06690, chloroplastic-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|399920240|gb|AFP55587.1| aldo-keto reductase [Rosa rugosa] Back     alignment and taxonomy information
>gi|224132648|ref|XP_002321374.1| predicted protein [Populus trichocarpa] gi|222868370|gb|EEF05501.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|302143959|emb|CBI23064.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query308
TAIR|locus:2168601365 PLR1 "AT5G53580" [Arabidopsis 0.990 0.835 0.749 1.5e-120
TAIR|locus:2009120377 AT1G06690 "AT1G06690" [Arabido 0.850 0.694 0.403 3e-46
TIGR_CMR|DET_0217324 DET_0217 "oxidoreductase, aldo 0.792 0.753 0.289 9.2e-20
UNIPROTKB|Q0C2F5344 HNE_1371 "Dimethylsulfoxide re 0.785 0.703 0.32 3.7e-18
ZFIN|ZDB-GENE-070912-690369 si:dkeyp-94h10.1 "si:dkeyp-94h 0.798 0.666 0.283 5.8e-18
UNIPROTKB|Q9PWR1401 KCNAB1 "Voltage-gated potassiu 0.798 0.613 0.280 8.5e-18
UNIPROTKB|I3LP21334 KCNAB2 "Uncharacterized protei 0.795 0.733 0.282 8.7e-18
UNIPROTKB|F1NDV0404 KCNAB1 "Voltage-gated potassiu 0.798 0.608 0.280 8.8e-18
UNIPROTKB|Q58HC3353 KCNAB2 "Potassium voltage-gate 0.795 0.694 0.282 1e-17
ZFIN|ZDB-GENE-080219-36440 zgc:171453 "zgc:171453" [Danio 0.795 0.556 0.289 1.2e-17
TAIR|locus:2168601 PLR1 "AT5G53580" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1186 (422.6 bits), Expect = 1.5e-120, P = 1.5e-120
 Identities = 230/307 (74%), Positives = 255/307 (83%)

Query:     1 MAFSSSTTPTVAYFSCFNTFNEISSXXXXXXXXXXXXXXEKVKMGPLSASPMGFGTWAWG 60
             MA + STT T    +C N  + I++              +KVKMGPLS SPMGFGTWAWG
Sbjct:     1 MALTLSTTKTFTNINCSNNTSNITTFKPLKLPLFWPW--QKVKMGPLSVSPMGFGTWAWG 58

Query:    61 NQFLWGYQESMDSQLQQTFNLAVENGINLFDTADSYGTGRLNGKSEKLLGKFISEIPGQK 120
             NQ LWGYQ SMD QLQQ F LA+ENGINLFDTADSYGTGRLNG+SE+LLGKFI E  G K
Sbjct:    59 NQLLWGYQTSMDDQLQQAFELALENGINLFDTADSYGTGRLNGQSERLLGKFIKESQGLK 118

Query:   121 QVQNNIVIATKFAAYPWRLTPGQFVNACRASLARLQIEQIGIGQLHWSTANYAPPQELAL 180
               QN +V+ATKFAAYPWRLT GQFVNACRASL RLQI+Q+GIGQLHWSTA+YAP QEL L
Sbjct:   119 GKQNEVVVATKFAAYPWRLTSGQFVNACRASLDRLQIDQLGIGQLHWSTASYAPLQELVL 178

Query:   181 WNGLVAMYEKGLVRAVGVSNYGPNQLVKIHDYLTARGVPLCSAQVQFSLLSMGENQLEIK 240
             W+GLV MYEKGLVRAVGVSNYGP QLVKIHDYL  RGVPLCSAQVQFSLLSMG+ QLEIK
Sbjct:   179 WDGLVQMYEKGLVRAVGVSNYGPQQLVKIHDYLKTRGVPLCSAQVQFSLLSMGKEQLEIK 238

Query:   241 NICDSLGIRLISYSPLGLGMLTGKYTPSKLPRGPRALLFRQILPGLKPLLRSLKEIAERR 300
             +ICD LGIRLISYSPLGLGMLTGKY+ SKLP GPR+LLFRQILPGL+PLL +L EIA++R
Sbjct:   239 SICDELGIRLISYSPLGLGMLTGKYSSSKLPTGPRSLLFRQILPGLEPLLLALSEIAKKR 298

Query:   301 GKTIPQL 307
             GKT+PQ+
Sbjct:   299 GKTMPQV 305
GO:0004033 "aldo-keto reductase (NADP) activity" evidence=ISS
GO:0009507 "chloroplast" evidence=ISM;IDA
GO:0009443 "pyridoxal 5'-phosphate salvage" evidence=IDA
GO:0042821 "pyridoxal biosynthetic process" evidence=IDA
GO:0050236 "pyridoxine:NADP 4-dehydrogenase activity" evidence=IDA
GO:0070402 "NADPH binding" evidence=IDA
GO:0000023 "maltose metabolic process" evidence=RCA
GO:0006098 "pentose-phosphate shunt" evidence=RCA
GO:0019252 "starch biosynthetic process" evidence=RCA
GO:0019761 "glucosinolate biosynthetic process" evidence=RCA
GO:0043085 "positive regulation of catalytic activity" evidence=RCA
TAIR|locus:2009120 AT1G06690 "AT1G06690" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TIGR_CMR|DET_0217 DET_0217 "oxidoreductase, aldo/keto reductase family" [Dehalococcoides ethenogenes 195 (taxid:243164)] Back     alignment and assigned GO terms
UNIPROTKB|Q0C2F5 HNE_1371 "Dimethylsulfoxide reductase chain B" [Hyphomonas neptunium ATCC 15444 (taxid:228405)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-070912-690 si:dkeyp-94h10.1 "si:dkeyp-94h10.1" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
UNIPROTKB|Q9PWR1 KCNAB1 "Voltage-gated potassium channel subunit beta-1" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
UNIPROTKB|I3LP21 KCNAB2 "Uncharacterized protein" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
UNIPROTKB|F1NDV0 KCNAB1 "Voltage-gated potassium channel subunit beta-1" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
UNIPROTKB|Q58HC3 KCNAB2 "Potassium voltage-gated channel, shaker-related subfamily, beta member 2, transcript variant 2" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-080219-36 zgc:171453 "zgc:171453" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q56Y42PLR1_ARATH1, ., 1, ., 1, ., 6, 50.78500.99020.8356yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query308
cd06660285 cd06660, Aldo_ket_red, Aldo-keto reductases (AKRs) 3e-61
COG0667316 COG0667, Tas, Predicted oxidoreductases (related t 2e-57
pfam00248277 pfam00248, Aldo_ket_red, Aldo/keto reductase famil 1e-56
COG0656280 COG0656, ARA1, Aldo/keto reductases, related to di 2e-34
TIGR01293317 TIGR01293, Kv_beta, voltage-dependent potassium ch 3e-16
PRK10625346 PRK10625, tas, putative aldo-keto reductase; Provi 3e-15
PRK09912346 PRK09912, PRK09912, L-glyceraldehyde 3-phosphate r 7e-15
COG4989298 COG4989, COG4989, Predicted oxidoreductase [Genera 3e-12
PLN02587314 PLN02587, PLN02587, L-galactose dehydrogenase 1e-10
COG1453 391 COG1453, COG1453, Predicted oxidoreductases of the 2e-10
PRK11565275 PRK11565, dkgA, 2,5-diketo-D-gluconate reductase A 5e-09
PRK10376290 PRK10376, PRK10376, putative oxidoreductase; Provi 5e-04
PRK11172267 PRK11172, dkgB, 2,5-diketo-D-gluconate reductase B 0.002
>gnl|CDD|119408 cd06660, Aldo_ket_red, Aldo-keto reductases (AKRs) are a superfamily of soluble NAD(P)(H) oxidoreductases whose chief purpose is to reduce aldehydes and ketones to primary and secondary alcohols Back     alignment and domain information 
 Score =  195 bits (499), Expect = 3e-61
 Identities = 87/265 (32%), Positives = 125/265 (47%), Gaps = 36/265 (13%)

Query: 47  LSASPMGFGTWAWGNQFLWGYQESMDSQLQQTFNLAVENGINLFDTADSYGTGRLNGKSE 106
           L  S +G GTW  G  ++       + +       A++ GIN  DTAD YG    +G+SE
Sbjct: 9   LKVSRLGLGTWQLGGGYV------DEEEAAAAVRAALDAGINFIDTADVYG----DGESE 58

Query: 107 KLLGKFISEIPGQKQVQNNIVIATKFAAYPW---RLTPGQFVNACRASLARLQIEQIGIG 163
           +LLG+ + E   +++V     IATK    P     L+P     A   SL RL  + I + 
Sbjct: 59  ELLGEALKERGPREEV----FIATKVGPRPGDGRDLSPEHIRRAVEESLKRLGTDYIDLY 114

Query: 164 QLHWSTANYAPPQELALWNGLVAMYEKGLVRAVGVSNYGPNQLVKIHDYLTARGVPLCSA 223
            LHW   +   P        L  + ++G +RA+GVSN+   QL +        GVP    
Sbjct: 115 LLHW--PDPDTPDIEETLRALEELVKEGKIRAIGVSNFSAEQLEEALAAA---GVPPAVN 169

Query: 224 QVQFSLLSMGENQLEIKNICDSLGIRLISYSPLGLGMLTGKYTPSKLPRGPRALLFRQIL 283
           QV+++LL   + + E+   C   GI +I+YSPL  G+LTGKY P   P            
Sbjct: 170 QVEYNLLDR-QAEEELLPYCREHGIGVIAYSPLAGGLLTGKYLPGAPPPEGD-------- 220

Query: 284 PGLKPLLRSLKEIAERRGKTIPQLL 308
                LL +LKEIAE+ G T  Q+ 
Sbjct: 221 -----LLEALKEIAEKHGVTPAQVA 240

AKRs are present in all phyla and are of importance to both health and industrial applications. Members have very distinct functions and include the prokaryotic 2,5-diketo-D-gluconic acid reductases and beta-keto ester reductases, the eukaryotic aldose reductases, aldehyde reductases, hydroxysteroid dehydrogenases, steroid 5beta-reductases, potassium channel beta-subunits and aflatoxin aldehyde reductases, among others. Length = 285
>gnl|CDD|223739 COG0667, Tas, Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) [Energy production and conversion] Back     alignment and domain information
>gnl|CDD|215817 pfam00248, Aldo_ket_red, Aldo/keto reductase family Back     alignment and domain information
>gnl|CDD|223729 COG0656, ARA1, Aldo/keto reductases, related to diketogulonate reductase [General function prediction only] Back     alignment and domain information
>gnl|CDD|213602 TIGR01293, Kv_beta, voltage-dependent potassium channel beta subunit, animal Back     alignment and domain information
>gnl|CDD|236727 PRK10625, tas, putative aldo-keto reductase; Provisional Back     alignment and domain information
>gnl|CDD|182140 PRK09912, PRK09912, L-glyceraldehyde 3-phosphate reductase; Provisional Back     alignment and domain information
>gnl|CDD|227322 COG4989, COG4989, Predicted oxidoreductase [General function prediction only] Back     alignment and domain information
>gnl|CDD|178198 PLN02587, PLN02587, L-galactose dehydrogenase Back     alignment and domain information
>gnl|CDD|224370 COG1453, COG1453, Predicted oxidoreductases of the aldo/keto reductase family [General function prediction only] Back     alignment and domain information
>gnl|CDD|183203 PRK11565, dkgA, 2,5-diketo-D-gluconate reductase A; Provisional Back     alignment and domain information
>gnl|CDD|236676 PRK10376, PRK10376, putative oxidoreductase; Provisional Back     alignment and domain information
>gnl|CDD|183012 PRK11172, dkgB, 2,5-diketo-D-gluconate reductase B; Provisional Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 308
KOG1575336 consensus Voltage-gated shaker-like K+ channel, su 100.0
COG0667316 Tas Predicted oxidoreductases (related to aryl-alc 100.0
COG0656280 ARA1 Aldo/keto reductases, related to diketogulona 100.0
PRK09912346 L-glyceraldehyde 3-phosphate reductase; Provisiona 100.0
TIGR01293317 Kv_beta voltage-dependent potassium channel beta s 100.0
PRK10625346 tas putative aldo-keto reductase; Provisional 100.0
PLN02587314 L-galactose dehydrogenase 100.0
KOG1577300 consensus Aldo/keto reductase family proteins [Gen 100.0
PRK10376290 putative oxidoreductase; Provisional 100.0
cd06660285 Aldo_ket_red Aldo-keto reductases (AKRs) are a sup 100.0
PRK11172267 dkgB 2,5-diketo-D-gluconate reductase B; Provision 100.0
COG4989298 Predicted oxidoreductase [General function predict 100.0
PF00248283 Aldo_ket_red: Aldo/keto reductase family; InterPro 100.0
PRK14863292 bifunctional regulator KidO; Provisional 100.0
PRK11565275 dkgA 2,5-diketo-D-gluconate reductase A; Provision 100.0
KOG1576342 consensus Predicted oxidoreductase [Energy product 100.0
COG1453 391 Predicted oxidoreductases of the aldo/keto reducta 100.0
KOG3023285 consensus Glutamate-cysteine ligase regulatory sub 98.35
PF07021193 MetW: Methionine biosynthesis protein MetW; InterP 94.09
cd03319316 L-Ala-DL-Glu_epimerase L-Ala-D/L-Glu epimerase cat 92.91
PF03102241 NeuB: NeuB family; InterPro: IPR013132 NeuB is the 89.67
PRK08392215 hypothetical protein; Provisional 89.18
PRK07945335 hypothetical protein; Provisional 88.66
cd03315265 MLE_like Muconate lactonizing enzyme (MLE) like su 84.64
PRK08609570 hypothetical protein; Provisional 84.3
cd03316357 MR_like Mandelate racemase (MR)-like subfamily of 83.89
PRK13796365 GTPase YqeH; Provisional 83.63
COG0635416 HemN Coproporphyrinogen III oxidase and related Fe 83.44
PRK09856 275 fructoselysine 3-epimerase; Provisional 83.25
COG1748389 LYS9 Saccharopine dehydrogenase and related protei 80.68
PRK04452319 acetyl-CoA decarbonylase/synthase complex subunit 80.48
KOG0259 447 consensus Tyrosine aminotransferase [Amino acid tr 80.16
>KOG1575 consensus Voltage-gated shaker-like K+ channel, subunit beta/KCNAB [Energy production and conversion] Back     alignment and domain information 
Probab=100.00  E-value=3.9e-55  Score=394.51  Aligned_cols=255  Identities=36%  Similarity=0.581  Sum_probs=222.5

Q ss_pred             CCcceeecC--CceeCcceeccCccCCCCcCCCCCCcHHHHHHHHHHHHHcCCCceeCCcCCCCCCCCCchHHHHHHHHh
Q 021767           37 WPWEKVKMG--PLSASPMGFGTWAWGNQFLWGYQESMDSQLQQTFNLAVENGINLFDTADSYGTGRLNGKSEKLLGKFIS  114 (308)
Q Consensus        37 ~~m~~~~lg--g~~vs~lglG~~~~g~~~~~~~~~~~~~~~~~~l~~A~e~Gi~~~DtA~~Yg~~~~~g~sE~~lG~~L~  114 (308)
                      ..|+++++|  |++||++|||||.+   ..|+.. .+++++++++++|+++|+|+||||++||+    |.+|+++|++|+
T Consensus        10 ~~~~~~~lg~~gl~Vs~lglG~m~~---~~~~~~-~~~e~a~~~m~~a~e~Gin~fDtAe~Yg~----~~~E~llg~~i~   81 (336)
T KOG1575|consen   10 LGMLRRKLGNSGLKVSPLGLGCMGW---TTFGGQ-IDKEEAFELLDHAYEAGINFFDTAEVYGN----GQSEELLGEFIK   81 (336)
T ss_pred             hcceeeeccCCCceecceeecceee---eccccC-CCHHHHHHHHHHHHHcCCCEEehhhhcCC----cccHHHHHHHHH
Confidence            458999999  89999999999843   345555 78899999999999999999999999998    999999999999


Q ss_pred             hCCCCCCCCCCEEEEeccCCCC-----CCCChHHHHHHHHHHHHhhCCCcccEEEecCCCCCCCChhHHHHHHHHHHHHH
Q 021767          115 EIPGQKQVQNNIVIATKFAAYP-----WRLTPGQFVNACRASLARLQIEQIGIGQLHWSTANYAPPQELALWNGLVAMYE  189 (308)
Q Consensus       115 ~~~~~~~~R~~v~i~tK~~~~~-----~~~~~~~i~~~~e~sL~~L~~d~iDl~~lH~~~~~~~~~~~~~~~~~l~~l~~  189 (308)
                      +++   ..|++|+|+||++...     .+.+..++...++.||++|+++||||||+||+|.. .|++  +++++|.++++
T Consensus        82 ~~~---~~R~~vviaTK~~~~~~~~~~~G~~~~~i~~~~~~s~~rl~~~~IDl~q~Hr~D~~-~pie--e~m~aL~~lve  155 (336)
T KOG1575|consen   82 SRG---WRRDKVVIATKFGFDYGGETPRGLSRKHIIEGVRDSLRRLQTDYIDLLQVHRWDPM-VPIE--ETMRALTDLVE  155 (336)
T ss_pred             hcC---CcCCcEEEEEEEeccCCCcCCCCCcHHHHHHHHHHHHHhcCCCeeEEEEEcccCCC-CCHH--HHHHHHHHHHh
Confidence            965   5899999999998643     55688999999999999999999999999998754 6765  49999999999


Q ss_pred             cCCccEEEeecCCHHHHHHHHHHHHHcCCCceeeeeccCcccCCcchhhHHHHHHHhCCcEEEcccccccccCCCCCCC-
Q 021767          190 KGLVRAVGVSNYGPNQLVKIHDYLTARGVPLCSAQVQFSLLSMGENQLEIKNICDSLGIRLISYSPLGLGMLTGKYTPS-  268 (308)
Q Consensus       190 ~G~ir~iGvSn~~~~~l~~~~~~~~~~~~~~~~~Q~~~~~~~~~~~~~~l~~~~~~~gi~v~a~spl~~G~L~~~~~~~-  268 (308)
                      +||||+||+|+++++++.++...+.   +|+.++|++||+++|+.++.+++++|++.||++++||||++|+|+++|... 
T Consensus       156 ~Gki~yiGlSe~sa~~I~~a~~~~~---~p~~s~Q~eysl~~Rd~ee~~i~~~c~~~Gi~li~ysPL~~G~Ltgk~~~~e  232 (336)
T KOG1575|consen  156 QGKIRYWGLSEWSAEEIREAHAVAP---IPIVAVQVEYSLLSRDKEERGIIPLCRELGIGLIAWSPLGRGLLTGKYKLGE  232 (336)
T ss_pred             cCceEEEEeccCCHHHHHHHHHhcC---CCceEeeeechhhhcchhhhhHHHHHHHcCcceEEecccccceeccCccccc
Confidence            9999999999999999999988743   669999999999999988878999999999999999999999999998654 


Q ss_pred             CCCCCchhhhhhccc------cChHHHHHHHHHHHHHhCCCcccCC
Q 021767          269 KLPRGPRALLFRQIL------PGLKPLLRSLKEIAERRGKTIPQLL  308 (308)
Q Consensus       269 ~~~~~~~~~~~~~~~------~~~~~~~~~l~~ia~~~g~s~aqva  308 (308)
                      +.+.+.....|....      +.+..+++++.++|+|+|+|++|+|
T Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iA~k~g~T~~qlA  278 (336)
T KOG1575|consen  233 DSRNGDKRFQFLGLSPQTEEGDKQKPILEALSKIAEKHGCTVPQLA  278 (336)
T ss_pred             ccccccccccccccccccchhhhHHHHHHHHHHHHHHcCCCHHHHH
Confidence            445554443333322      4477889999999999999999986

>COG0667 Tas Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) [Energy production and conversion] Back     alignment and domain information
>COG0656 ARA1 Aldo/keto reductases, related to diketogulonate reductase [General function prediction only] Back     alignment and domain information
>PRK09912 L-glyceraldehyde 3-phosphate reductase; Provisional Back     alignment and domain information
>TIGR01293 Kv_beta voltage-dependent potassium channel beta subunit, animal Back     alignment and domain information
>PRK10625 tas putative aldo-keto reductase; Provisional Back     alignment and domain information
>PLN02587 L-galactose dehydrogenase Back     alignment and domain information
>KOG1577 consensus Aldo/keto reductase family proteins [General function prediction only] Back     alignment and domain information
>PRK10376 putative oxidoreductase; Provisional Back     alignment and domain information
>cd06660 Aldo_ket_red Aldo-keto reductases (AKRs) are a superfamily of soluble NAD(P)(H) oxidoreductases whose chief purpose is to reduce aldehydes and ketones to primary and secondary alcohols Back     alignment and domain information
>PRK11172 dkgB 2,5-diketo-D-gluconate reductase B; Provisional Back     alignment and domain information
>COG4989 Predicted oxidoreductase [General function prediction only] Back     alignment and domain information
>PF00248 Aldo_ket_red: Aldo/keto reductase family; InterPro: IPR023210 The aldo-keto reductase family includes a number of related monomeric NADPH-dependent oxidoreductases, such as aldehyde reductase, aldose reductase, prostaglandin F synthase, xylose reductase, rho crystallin, and many others [] Back     alignment and domain information
>PRK14863 bifunctional regulator KidO; Provisional Back     alignment and domain information
>PRK11565 dkgA 2,5-diketo-D-gluconate reductase A; Provisional Back     alignment and domain information
>KOG1576 consensus Predicted oxidoreductase [Energy production and conversion] Back     alignment and domain information
>COG1453 Predicted oxidoreductases of the aldo/keto reductase family [General function prediction only] Back     alignment and domain information
>KOG3023 consensus Glutamate-cysteine ligase regulatory subunit [Amino acid transport and metabolism] Back     alignment and domain information
>PF07021 MetW: Methionine biosynthesis protein MetW; InterPro: IPR010743 This family consists of several bacterial and one archaeal methionine biosynthesis MetW proteins Back     alignment and domain information
>cd03319 L-Ala-DL-Glu_epimerase L-Ala-D/L-Glu epimerase catalyzes the epimerization of L-Ala-D/L-Glu and other dipeptides Back     alignment and domain information
>PF03102 NeuB: NeuB family; InterPro: IPR013132 NeuB is the prokaryotic N-acetylneuraminic acid synthase (Neu5Ac) Back     alignment and domain information
>PRK08392 hypothetical protein; Provisional Back     alignment and domain information
>PRK07945 hypothetical protein; Provisional Back     alignment and domain information
>cd03315 MLE_like Muconate lactonizing enzyme (MLE) like subgroup of the enolase superfamily Back     alignment and domain information
>PRK08609 hypothetical protein; Provisional Back     alignment and domain information
>cd03316 MR_like Mandelate racemase (MR)-like subfamily of the enolase superfamily Back     alignment and domain information
>PRK13796 GTPase YqeH; Provisional Back     alignment and domain information
>COG0635 HemN Coproporphyrinogen III oxidase and related Fe-S oxidoreductases [Coenzyme metabolism] Back     alignment and domain information
>PRK09856 fructoselysine 3-epimerase; Provisional Back     alignment and domain information
>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism] Back     alignment and domain information
>PRK04452 acetyl-CoA decarbonylase/synthase complex subunit delta; Provisional Back     alignment and domain information
>KOG0259 consensus Tyrosine aminotransferase [Amino acid transport and metabolism] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query308
3uyi_A337 Crystal Structure Of Perakine Reductase, Founder Me 5e-20
3v0t_A337 Crystal Structure Of Perakine Reductase, Founder Me 3e-19
3v0u_A338 Crystal Structure Of Perakine Reductase, Founder Me 3e-19
3v0s_A337 Crystal Structure Of Perakine Reductase, Founder Me 2e-18
3n2t_A348 Structure Of The Glycerol Dehydrogenase Akr11b4 Fro 2e-16
1zsx_A347 Crystal Structure Of Human Potassium Channel Kv Bet 3e-16
1pz1_A333 Structure Of Nadph-Dependent Family 11 Aldo-Keto Re 7e-16
2a79_A333 Mammalian Shaker Kv1.2 Potassium Channel- Beta Subu 8e-16
1exb_A332 Structure Of The Cytoplasmic Beta Subunit-T1 Assemb 9e-16
1qrq_A325 Structure Of A Voltage-Dependent K+ Channel Beta Su 9e-16
3eau_A327 Voltage-Dependent K+ Channel Beta Subunit In Comple 9e-16
3eb3_A327 Voltage-Dependent K+ Channel Beta Subunit (W121a) I 1e-15
3lut_A367 A Structural Model For The Full-Length Shaker Potas 1e-15
3eb4_A327 Voltage-Dependent K+ Channel Beta Subunit (I211r) I 2e-15
4aub_A366 The Complex Structure Of The Bacterial Aldo-Keto Re 6e-13
3n6q_A346 Crystal Structure Of Yghz From E. Coli Length = 346 6e-13
1lqa_A346 Tas Protein From Escherichia Coli In Complex With N 1e-12
2wzm_A283 Crystal Structure Of A Mycobacterium Aldo-Keto Redu 1e-12
1pyf_A312 Structure Of Nadph-Dependent Family 11 Aldo-Keto Re 2e-12
1qwk_A317 Structural Genomics Of Caenorhabditis Elegans: Hypo 2e-11
1ynp_A317 Aldo-keto Reductase Akr11c1 From Bacillus Haloduran 6e-10
1cwn_A324 Crystal Structure Of Porcine Aldehyde Reductase Hol 1e-09
1ae4_A325 Aldehyde Reductase Complexed With Cofactor And Inhi 2e-09
3cv7_A325 Crystal Structure Of Porcine Aldehyde Reductase Ter 2e-09
3h7u_A335 Crystal Structure Of The Plant Stress-Response Enzy 5e-09
3erp_A353 Structure Of Idp01002, A Putative Oxidoreductase Fr 6e-09
1hqt_A326 The Crystal Structure Of An Aldehyde Reductase Y50f 8e-09
2alr_A324 Aldehyde Reductase Length = 324 1e-08
4gac_A324 High Resolution Structure Of Mouse Aldehyde Reducta 3e-08
2bgq_A344 Apo Aldose Reductase From Barley Length = 344 1e-07
1zgd_A312 Chalcone Reductase Complexed With Nadp+ At 1.7 Angs 1e-07
3krb_A334 Structure Of Aldose Reductase From Giardia Lamblia 2e-07
3h7r_A331 Crystal Structure Of The Plant Stress-Response Enzy 2e-07
3qkz_A316 Crystal Structure Of Mutant His269arg Akr1b14 Lengt 1e-06
3o3r_A316 Crystal Structure Of Akr1b14 In Complex With Nadp L 1e-06
2bp1_B360 Structure Of The Aflatoxin Aldehyde Reductase In Co 1e-06
1q5m_A322 Binary Complex Of Rabbit 20alpha-Hydroxysteroid Deh 2e-06
1q13_A323 Crystal Structure Of Rabbit 20alpha Hyroxysteroid D 2e-06
3cv6_A323 The Crystal Structure Of Mouse 17-Alpha Hydroxyster 2e-06
1mzr_A296 Structure Of Dkga From E.Coli At 2.13 A Resolution 2e-06
4f40_A288 X-Ray Crystal Structure Of Apo Prostaglandin F Synt 2e-06
1frb_A315 Fr-1 ProteinNADPHZOPOLRESTAT COMPLEX Length = 315 2e-06
2c91_A338 Mouse Succinic Semialdehyde Reductase, Akr7a5 Lengt 3e-06
1hw6_A278 Crystal Structure Of Apo-2,5-Diketo-D-Gluconate Red 4e-06
1zua_X317 Crystal Structure Of Akr1b10 Complexed With Nadp+ A 4e-06
1a80_A277 Native 2,5-Diketo-D-Gluconic Acid Reductase A From 4e-06
1m9h_A278 Corynebacterium 2,5-dkgr A And Phe 22 Replaced With 4e-06
4fzi_A290 Crystal Structure Of Prostaglandin F Synthase From 4e-06
3fjn_A323 The Crystal Structure Of 17-Alpha Hydroxysteroid De 4e-06
2he5_A323 Crystal Structure Of 17alpha-Hydroxysteroid Dehydro 4e-06
2ipf_A318 Crystal Structure Of 17alpha-Hydroxysteroid Dehydro 5e-06
2ipg_A319 Crystal Structure Of 17alpha-Hydroxysteroid Dehydro 6e-06
3b3d_A314 B.Subtilis Ytbe Length = 314 7e-06
3gug_A323 Crystal Structure Of Akr1c1 L308v Mutant In Complex 1e-05
1mrq_A323 Crystal Structure Of Human 20alpha-hsd In Ternary C 1e-05
3c3u_A323 Crystal Structure Of Akr1c1 In Complex With Nadp An 1e-05
1xjb_A325 Crystal Structure Of Human Type 3 3alpha-Hydroxyste 2e-05
1ihi_A323 Crystal Structure Of Human Type Iii 3-Alpha-Hydroxy 2e-05
1j96_A323 Human 3alpha-Hsd Type 3 In Ternary Complex With Nad 2e-05
4exa_A292 Crystal Structure Of The Pa4992, The Putative Aldo- 3e-05
1vbj_A281 The Crystal Structure Of Prostaglandin F Synthase F 3e-05
3ln3_A324 Crystal Structure Of Putative Reductase (Np_038806. 3e-05
3f7j_A276 B.Subtilis Yvgn Length = 276 4e-05
3d3f_A275 Crystal Structure Of Yvgn And Cofactor Nadph From B 4e-05
1vp5_A298 Crystal Structure Of 2,5-diketo-d-gluconic Acid Red 4e-05
2ipj_A321 Crystal Structure Of H3alpha-Hydroxysteroid Dehydro 7e-05
3o0k_A283 Crystal Structure Of AldoKETO REDUCTASE FROM BRUCEL 8e-05
1ah0_A316 Pig Aldose Reductase Complexed With Sorbinil Length 1e-04
1c9w_A315 Cho Reductase With Nadp+ Length = 315 1e-04
1dla_A314 Novel Nadph-Binding Domain Revealed By The Crystal 1e-04
1eko_A315 Pig Aldose Reductase Complexed With Idd384 Inhibito 1e-04
1lwi_A322 3-Alpha-HydroxysteroidDIHYDRODIOL DEHYDROGENASE FRO 1e-04
1afs_A323 Recombinant Rat Liver 3-Alpha-Hydroxysteroid Dehydr 1e-04
1ral_A308 Three-Dimensional Structure Of Rat Liver 3alpha- Hy 1e-04
2ipw_A315 Crystal Structure Of C298a W219y Aldose Reductase C 2e-04
3rx2_A336 Crystal Structure Of Human Aldose Reductase Complex 3e-04
1z3n_A319 Human Aldose Reductase In Complex With Nadp+ And Th 4e-04
2agt_A319 Aldose Reductase Mutant Leu 300 Pro Complexed With 4e-04
1pwl_A316 Crystal Structure Of Human Aldose Reductase Complex 4e-04
1ry0_A323 Structure Of Prostaglandin F Synthase With Prostagl 4e-04
2pdf_A316 Human Aldose Reductase Mutant L300p Complexed With 4e-04
2pdb_A316 Human Aldose Reductase Mutant F121p Complexed With 4e-04
2r24_A316 Human Aldose Reductase Structure Length = 316 4e-04
2pdm_A316 Human Aldose Reductase Mutant S302r Complexed With 4e-04
2pdk_A316 Human Aldose Reductase Mutant L301m Complexed With 4e-04
2pdi_A316 Human Aldose Reductase Mutant L300a Complexed With 4e-04
2is7_A315 Crystal Structure Of Aldose Reductase Complexed Wit 4e-04
1el3_A316 Human Aldose Reductase Complexed With Idd384 Inhibi 4e-04
1xgd_A315 Apo R268a Human Aldose Reductase Length = 315 4e-04
3r43_A331 Akr1c3 Complexed With Mefenamic Acid Length = 331 4e-04
1ef3_A315 Fidarestat Bound To Human Aldose Reductase Length = 4e-04
1s1p_A331 Crystal Structures Of Prostaglandin D2 11-Ketoreduc 4e-04
2pdq_A316 Human Aldose Reductase Mutant C303d Complexed With 4e-04
1abn_A315 The Crystal Structure Of The Aldose Reductase Nadph 4e-04
3uwe_A331 Akr1c3 Complexed With 3-Phenoxybenzoic Acid Length 4e-04
2pdx_A316 Human Aldose Reductase Double Mutant S302r-C303d Co 4e-04
3q67_A316 Human Aldose Reductase C298s Mutant In Complex With 5e-04
2pd5_A316 Human Aldose Reductase Mutant V47i Complexed With Z 5e-04
3lqg_A316 Human Aldose Reductase Mutant T113a Complexed With 6e-04
3onb_A315 Bond Breakage And Relocation Of A Covalently Bound 7e-04
2fvl_A324 Crystal Structure Of Human 3-alpha Hydroxysteroid/d 8e-04
>pdb|3UYI|A Chain A, Crystal Structure Of Perakine Reductase, Founder Member Of A Novel Akr Subfamily With Unique Conformational Changes During Nadph Binding Length = 337 Back     alignment and structure 
Iteration: 1

 Score = 94.7 bits (234), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 71/242 (29%), Positives = 118/242 (48%), Gaps = 31/242 (12%)
Query: 41  KVKMGP--LSASPMGFGTWAWGNQFLWGYQESMD-SQLQQTFNLAVENGINLFDTADSYG 97
           +VK+G   L  S +GFG       +     E    + +++ FN     GI  FDT+D YG
Sbjct: 4   RVKLGTQGLEVSKLGFGCMGLSGDYNDALPEEQGIAVIKEAFNC----GITFFDTSDIYG 59
Query: 98  TGRLNGKSEKLLGKFISEIPGQKQVQNNIVIATKFAAYPW-------RLTPGQFVNACRA 150
               NG +E+LLGK + ++P +K     I + TKF  +         + TP    + C A
Sbjct: 60  E---NGSNEELLGKALKQLPREK-----IQVGTKFGIHEIGFSGVKAKGTPDYVRSCCEA 111
Query: 151 SLARLQIEQIGIGQLHWSTANYAPPQELALWNGLVAMYEKGLVRAVGVSNYGPNQLVKIH 210
           SL RL ++ I +  +H    +   P E+ +   L  + E+G ++ VG+S   P+ + + H
Sbjct: 112 SLKRLDVDYIDLFYIH--RIDTTVPIEITMGE-LXKLVEEGKIKYVGLSEASPDTIRRAH 168
Query: 211 DYLTARGVPLCSAQVQFSLLSMGENQLEIKNICDSLGIRLISYSPLGLGMLTGKYTPSKL 270
                   P+ + Q+++SL +  + + EI  +C  LGI ++ YSP+G G+  GK     L
Sbjct: 169 AVH-----PVTALQIEYSLWTR-DIEDEIVPLCRQLGIGIVPYSPIGRGLFAGKAIKESL 222
Query: 271 PR 272
           P 
Sbjct: 223 PE 224
>pdb|3V0T|A Chain A, Crystal Structure Of Perakine Reductase, Founder Member Of A Novel Akr Subfamily With Unique Conformational Changes During Nadph Binding Length = 337 Back     alignment and structure
>pdb|3V0U|A Chain A, Crystal Structure Of Perakine Reductase, Founder Member Of A Novel Akr Subfamily With Unique Conformational Changes During Nadph Binding Length = 338 Back     alignment and structure
>pdb|3V0S|A Chain A, Crystal Structure Of Perakine Reductase, Founder Member Of A Novel Akr Subfamily With Unique Conformational Changes During Nadph Binding Length = 337 Back     alignment and structure
>pdb|3N2T|A Chain A, Structure Of The Glycerol Dehydrogenase Akr11b4 From Gluconobacter Oxydans Length = 348 Back     alignment and structure
>pdb|1ZSX|A Chain A, Crystal Structure Of Human Potassium Channel Kv Beta-Subunit (Kcnab2) Length = 347 Back     alignment and structure
>pdb|1PZ1|A Chain A, Structure Of Nadph-Dependent Family 11 Aldo-Keto Reductase Akr11b(Holo) Length = 333 Back     alignment and structure
>pdb|2A79|A Chain A, Mammalian Shaker Kv1.2 Potassium Channel- Beta Subunit Complex Length = 333 Back     alignment and structure
>pdb|1EXB|A Chain A, Structure Of The Cytoplasmic Beta Subunit-T1 Assembly Of Voltage-Dependent K Channels Length = 332 Back     alignment and structure
>pdb|1QRQ|A Chain A, Structure Of A Voltage-Dependent K+ Channel Beta Subunit Length = 325 Back     alignment and structure
>pdb|3EAU|A Chain A, Voltage-Dependent K+ Channel Beta Subunit In Complex With Cortisone Length = 327 Back     alignment and structure
>pdb|3EB3|A Chain A, Voltage-Dependent K+ Channel Beta Subunit (W121a) In Complex With Cortisone Length = 327 Back     alignment and structure
>pdb|3LUT|A Chain A, A Structural Model For The Full-Length Shaker Potassium Channel Kv1.2 Length = 367 Back     alignment and structure
>pdb|3EB4|A Chain A, Voltage-Dependent K+ Channel Beta Subunit (I211r) In Complex With Cortisone Length = 327 Back     alignment and structure
>pdb|4AUB|A Chain A, The Complex Structure Of The Bacterial Aldo-Keto Reductase Akr14a1 With Nadp And Citrate Length = 366 Back     alignment and structure
>pdb|3N6Q|A Chain A, Crystal Structure Of Yghz From E. Coli Length = 346 Back     alignment and structure
>pdb|1LQA|A Chain A, Tas Protein From Escherichia Coli In Complex With Nadph Length = 346 Back     alignment and structure
>pdb|2WZM|A Chain A, Crystal Structure Of A Mycobacterium Aldo-Keto Reductase In Its Apo And Liganded Form Length = 283 Back     alignment and structure
>pdb|1PYF|A Chain A, Structure Of Nadph-Dependent Family 11 Aldo-Keto Reductase Akr11a(Apo) Length = 312 Back     alignment and structure
>pdb|1QWK|A Chain A, Structural Genomics Of Caenorhabditis Elegans: Hypothetical 35.2 Kda Protein (Aldose Reductase Family Member) Length = 317 Back     alignment and structure
>pdb|1YNP|A Chain A, Aldo-keto Reductase Akr11c1 From Bacillus Halodurans (apo Form) Length = 317 Back     alignment and structure
>pdb|1CWN|A Chain A, Crystal Structure Of Porcine Aldehyde Reductase Holoenzyme Length = 324 Back     alignment and structure
>pdb|1AE4|A Chain A, Aldehyde Reductase Complexed With Cofactor And Inhibitor, Alpha Carbon Atoms Only Length = 325 Back     alignment and structure
>pdb|3CV7|A Chain A, Crystal Structure Of Porcine Aldehyde Reductase Ternary Complex Length = 325 Back     alignment and structure
>pdb|3H7U|A Chain A, Crystal Structure Of The Plant Stress-Response Enzyme Akr4c9 Length = 335 Back     alignment and structure
>pdb|3ERP|A Chain A, Structure Of Idp01002, A Putative Oxidoreductase From And Essential Gene Of Salmonella Typhimurium Length = 353 Back     alignment and structure
>pdb|1HQT|A Chain A, The Crystal Structure Of An Aldehyde Reductase Y50f Mutant- Nadp Complex And Its Implications For Substrate Binding Length = 326 Back     alignment and structure
>pdb|2ALR|A Chain A, Aldehyde Reductase Length = 324 Back     alignment and structure
>pdb|4GAC|A Chain A, High Resolution Structure Of Mouse Aldehyde Reductase (akr1a4) In Its Apo-form Length = 324 Back     alignment and structure
>pdb|2BGQ|A Chain A, Apo Aldose Reductase From Barley Length = 344 Back     alignment and structure
>pdb|1ZGD|A Chain A, Chalcone Reductase Complexed With Nadp+ At 1.7 Angstrom Resolution Length = 312 Back     alignment and structure
>pdb|3KRB|A Chain A, Structure Of Aldose Reductase From Giardia Lamblia At 1.75a Resolution Length = 334 Back     alignment and structure
>pdb|3H7R|A Chain A, Crystal Structure Of The Plant Stress-Response Enzyme Akr4c8 Length = 331 Back     alignment and structure
>pdb|3QKZ|A Chain A, Crystal Structure Of Mutant His269arg Akr1b14 Length = 316 Back     alignment and structure
>pdb|3O3R|A Chain A, Crystal Structure Of Akr1b14 In Complex With Nadp Length = 316 Back     alignment and structure
>pdb|1Q5M|A Chain A, Binary Complex Of Rabbit 20alpha-Hydroxysteroid Dehydrogenase With Nadph Length = 322 Back     alignment and structure
>pdb|1Q13|A Chain A, Crystal Structure Of Rabbit 20alpha Hyroxysteroid Dehydrogenase In Ternary Complex With Nadp And Testosterone Length = 323 Back     alignment and structure
>pdb|3CV6|A Chain A, The Crystal Structure Of Mouse 17-Alpha Hydroxysteroid Dehydrogenase Gg225.226pp Mutant In Complex With Inhibitor And Cofactor Nadp+. Length = 323 Back     alignment and structure
>pdb|1MZR|A Chain A, Structure Of Dkga From E.Coli At 2.13 A Resolution Solved By Molecular Replacement Length = 296 Back     alignment and structure
>pdb|4F40|A Chain A, X-Ray Crystal Structure Of Apo Prostaglandin F Synthase From Leishmania Major Friedlin Length = 288 Back     alignment and structure
>pdb|1FRB|A Chain A, Fr-1 ProteinNADPHZOPOLRESTAT COMPLEX Length = 315 Back     alignment and structure
>pdb|2C91|A Chain A, Mouse Succinic Semialdehyde Reductase, Akr7a5 Length = 338 Back     alignment and structure
>pdb|1HW6|A Chain A, Crystal Structure Of Apo-2,5-Diketo-D-Gluconate Reductase Length = 278 Back     alignment and structure
>pdb|1ZUA|X Chain X, Crystal Structure Of Akr1b10 Complexed With Nadp+ And Tolrestat Length = 317 Back     alignment and structure
>pdb|1A80|A Chain A, Native 2,5-Diketo-D-Gluconic Acid Reductase A From Corynbacterium Sp. Complexed With Nadph Length = 277 Back     alignment and structure
>pdb|1M9H|A Chain A, Corynebacterium 2,5-dkgr A And Phe 22 Replaced With Tyr (f22y), Lys 232 Replaced With Gly (k232g), Arg 238 Replaced With His (r238h)and Ala 272 Replaced With Gly (a272g)in Presence Of Nadh Cofactor Length = 278 Back     alignment and structure
>pdb|4FZI|A Chain A, Crystal Structure Of Prostaglandin F Synthase From Trypanosoma Cruzi Length = 290 Back     alignment and structure
>pdb|3FJN|A Chain A, The Crystal Structure Of 17-Alpha Hydroxysteroid Dehydrogenase Y224d Mutant. Length = 323 Back     alignment and structure
>pdb|2HE5|A Chain A, Crystal Structure Of 17alpha-Hydroxysteroid Dehydrogenase In Binary Complex With Nadp(H) In An Open Conformation Length = 323 Back     alignment and structure
>pdb|2IPF|A Chain A, Crystal Structure Of 17alpha-Hydroxysteroid Dehydrogenase In Complex With Nadp+ And Epi-Testosterone Length = 318 Back     alignment and structure
>pdb|2IPG|A Chain A, Crystal Structure Of 17alpha-Hydroxysteroid Dehydrogenase Mutant K31a In Complex With Nadp+ And Epi-Testosterone Length = 319 Back     alignment and structure
>pdb|3B3D|A Chain A, B.Subtilis Ytbe Length = 314 Back     alignment and structure
>pdb|3GUG|A Chain A, Crystal Structure Of Akr1c1 L308v Mutant In Complex With Nadp And 3,5-Dichlorosalicylic Acid Length = 323 Back     alignment and structure
>pdb|1MRQ|A Chain A, Crystal Structure Of Human 20alpha-hsd In Ternary Complex With Nadp And 20alpha-hydroxy-progesterone Length = 323 Back     alignment and structure
>pdb|3C3U|A Chain A, Crystal Structure Of Akr1c1 In Complex With Nadp And 3,5- Dichlorosalicylic Acid Length = 323 Back     alignment and structure
>pdb|1XJB|A Chain A, Crystal Structure Of Human Type 3 3alpha-Hydroxysteroid Dehydrogenase In Complex With Nadp(H), Citrate And Acetate Molecules Length = 325 Back     alignment and structure
>pdb|1IHI|A Chain A, Crystal Structure Of Human Type Iii 3-Alpha-Hydroxysteroid DehydrogenaseBILE ACID BINDING PROTEIN (AKR1C2) COMPLEXED With Nadp+ And Ursodeoxycholate Length = 323 Back     alignment and structure
>pdb|1J96|A Chain A, Human 3alpha-Hsd Type 3 In Ternary Complex With Nadp And Testosterone Length = 323 Back     alignment and structure
>pdb|4EXA|A Chain A, Crystal Structure Of The Pa4992, The Putative Aldo-keto Reductase From Pseudomona Aeruginosa Length = 292 Back     alignment and structure
>pdb|1VBJ|A Chain A, The Crystal Structure Of Prostaglandin F Synthase From Trypanosoma Brucei Length = 281 Back     alignment and structure
>pdb|3LN3|A Chain A, Crystal Structure Of Putative Reductase (Np_038806.2) From Mus Musculus At 1.18 A Resolution Length = 324 Back     alignment and structure
>pdb|3F7J|A Chain A, B.Subtilis Yvgn Length = 276 Back     alignment and structure
>pdb|3D3F|A Chain A, Crystal Structure Of Yvgn And Cofactor Nadph From Bacillus Subtilis Length = 275 Back     alignment and structure
>pdb|1VP5|A Chain A, Crystal Structure Of 2,5-diketo-d-gluconic Acid Reductase (tm1009) From Thermotoga Maritima At 2.40 A Resolution Length = 298 Back     alignment and structure
>pdb|2IPJ|A Chain A, Crystal Structure Of H3alpha-Hydroxysteroid Dehydrogenase Type 3 Mutant Y24a In Complex With Nadp+ And Epi-Testosterone Length = 321 Back     alignment and structure
>pdb|3O0K|A Chain A, Crystal Structure Of AldoKETO REDUCTASE FROM BRUCELLA MELITENSIS Length = 283 Back     alignment and structure
>pdb|1AH0|A Chain A, Pig Aldose Reductase Complexed With Sorbinil Length = 316 Back     alignment and structure
>pdb|1C9W|A Chain A, Cho Reductase With Nadp+ Length = 315 Back     alignment and structure
>pdb|1DLA|A Chain A, Novel Nadph-Binding Domain Revealed By The Crystal Structure Of Aldose Reductase Length = 314 Back     alignment and structure
>pdb|1EKO|A Chain A, Pig Aldose Reductase Complexed With Idd384 Inhibitor Length = 315 Back     alignment and structure
>pdb|1LWI|A Chain A, 3-Alpha-HydroxysteroidDIHYDRODIOL DEHYDROGENASE FROM Rattus Norvegicus Length = 322 Back     alignment and structure
>pdb|1AFS|A Chain A, Recombinant Rat Liver 3-Alpha-Hydroxysteroid Dehydrogenase (3-Alpha-Hsd) Complexed With Nadp And Testosterone Length = 323 Back     alignment and structure
>pdb|1RAL|A Chain A, Three-Dimensional Structure Of Rat Liver 3alpha- Hydroxysteroid(Slash)dihydrodiol Dehydrogenase: A Member Of The Aldo-Keto Reductase Superfamily Length = 308 Back     alignment and structure
>pdb|2IPW|A Chain A, Crystal Structure Of C298a W219y Aldose Reductase Complexed With Dichlorophenylacetic Acid Length = 315 Back     alignment and structure
>pdb|3RX2|A Chain A, Crystal Structure Of Human Aldose Reductase Complexed With Sulindac Sulfone Length = 336 Back     alignment and structure
>pdb|1Z3N|A Chain A, Human Aldose Reductase In Complex With Nadp+ And The Inhibitor Lidorestat At 1.04 Angstrom Length = 319 Back     alignment and structure
>pdb|2AGT|A Chain A, Aldose Reductase Mutant Leu 300 Pro Complexed With Fidarestat Length = 319 Back     alignment and structure
>pdb|1PWL|A Chain A, Crystal Structure Of Human Aldose Reductase Complexed With Nadp And Minalrestat Length = 316 Back     alignment and structure
>pdb|1RY0|A Chain A, Structure Of Prostaglandin F Synthase With Prostaglandin D2 Length = 323 Back     alignment and structure
>pdb|2PDF|A Chain A, Human Aldose Reductase Mutant L300p Complexed With Zopolrestat. Length = 316 Back     alignment and structure
>pdb|2PDB|A Chain A, Human Aldose Reductase Mutant F121p Complexed With Zopolrestat. Length = 316 Back     alignment and structure
>pdb|2R24|A Chain A, Human Aldose Reductase Structure Length = 316 Back     alignment and structure
>pdb|2PDM|A Chain A, Human Aldose Reductase Mutant S302r Complexed With Zopolrestat. Length = 316 Back     alignment and structure
>pdb|2PDK|A Chain A, Human Aldose Reductase Mutant L301m Complexed With Sorbinil. Length = 316 Back     alignment and structure
>pdb|2PDI|A Chain A, Human Aldose Reductase Mutant L300a Complexed With Zopolrestat At 1.55 A. Length = 316 Back     alignment and structure
>pdb|2IS7|A Chain A, Crystal Structure Of Aldose Reductase Complexed With Dichlorophenylacetic Acid Length = 315 Back     alignment and structure
>pdb|1EL3|A Chain A, Human Aldose Reductase Complexed With Idd384 Inhibitor Length = 316 Back     alignment and structure
>pdb|1XGD|A Chain A, Apo R268a Human Aldose Reductase Length = 315 Back     alignment and structure
>pdb|3R43|A Chain A, Akr1c3 Complexed With Mefenamic Acid Length = 331 Back     alignment and structure
>pdb|1EF3|A Chain A, Fidarestat Bound To Human Aldose Reductase Length = 315 Back     alignment and structure
>pdb|1S1P|A Chain A, Crystal Structures Of Prostaglandin D2 11-Ketoreductase (Akr1c3) In Complex With The Non-Steroidal Anti- Inflammatory Drugs Flufenamic Acid And Indomethacin Length = 331 Back     alignment and structure
>pdb|2PDQ|A Chain A, Human Aldose Reductase Mutant C303d Complexed With Uracil- Type Inhibitor. Length = 316 Back     alignment and structure
>pdb|1ABN|A Chain A, The Crystal Structure Of The Aldose Reductase Nadph Binary Complex Length = 315 Back     alignment and structure
>pdb|3UWE|A Chain A, Akr1c3 Complexed With 3-Phenoxybenzoic Acid Length = 331 Back     alignment and structure
>pdb|2PDX|A Chain A, Human Aldose Reductase Double Mutant S302r-C303d Complexed With Zopolrestat. Length = 316 Back     alignment and structure
>pdb|3Q67|A Chain A, Human Aldose Reductase C298s Mutant In Complex With Nadp+ In Space Group P212121 Length = 316 Back     alignment and structure
>pdb|2PD5|A Chain A, Human Aldose Reductase Mutant V47i Complexed With Zopolrestat Length = 316 Back     alignment and structure
>pdb|3LQG|A Chain A, Human Aldose Reductase Mutant T113a Complexed With Idd388 Length = 316 Back     alignment and structure
>pdb|3ONB|A Chain A, Bond Breakage And Relocation Of A Covalently Bound Bromine Of Idd594 In A Complex With Har T113a Mutant After Extensive Radiation Dose Length = 315 Back     alignment and structure
>pdb|2FVL|A Chain A, Crystal Structure Of Human 3-alpha Hydroxysteroid/dihydrodiol Dehydrogenase (akr1c4) Complexed With Nadp+ Length = 324 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query308
1pyf_A312 IOLS protein; beta-alpha barrel, aldo-keto reducta 2e-49
1pz1_A333 GSP69, general stress protein 69; beta-alpha barre 5e-48
3n2t_A348 Putative oxidoreductase; aldo/keto reductase super 1e-46
3n6q_A346 YGHZ aldo-keto reductase; TIM barrel, oxidoreducta 4e-40
1ur3_M319 Hypothetical oxidoreductase YDHF; NADP binding, al 5e-40
1ynp_A317 Oxidoreductase, AKR11C1; aldo-keto reductase, NADP 2e-39
1gve_A327 Aflatoxin B1 aldehyde reductase member 3; oxidored 2e-38
2bp1_A360 Aflatoxin B1 aldehyde reductase member 2; oxidored 2e-38
3erp_A353 Putative oxidoreductase; funded by the national in 4e-38
1lqa_A346 TAS protein; TIM barrel, structure 2 function proj 1e-37
3eau_A327 Voltage-gated potassium channel subunit beta-2; kv 6e-35
3lut_A367 Voltage-gated potassium channel subunit beta-2; vo 4e-34
3v0s_A337 Perakine reductase; AKR superfamily, oxidoreductas 3e-31
1qwk_A317 Aldose reductase, aldo-keto reductase family 1 mem 1e-21
1afs_A323 3-alpha-HSD, 3-alpha-hydroxysteroid dehydrogenase; 5e-20
1s1p_A331 Aldo-keto reductase family 1 member C3; TIM-barrel 5e-20
1zgd_A312 Chalcone reductase; polyketide, deoxychalcone, iso 6e-20
3buv_A326 3-OXO-5-beta-steroid 4-dehydrogenase; 5-beta-reduc 4e-19
3h7u_A335 Aldo-keto reductase; stress response, NADP, drough 2e-18
4gie_A290 Prostaglandin F synthase; structural genomics, nia 2e-18
1us0_A316 Aldose reductase; oxidoreductase, NADP, IDD594; HE 2e-18
1vp5_A298 2,5-diketo-D-gluconic acid reductase; TM1009, stru 2e-18
4f40_A288 Prostaglandin F2-alpha synthase/D-arabinose dehyd; 4e-18
2bgs_A344 Aldose reductase; holoenzyme, aldo/keto reductase, 4e-18
1mzr_A296 2,5-diketo-D-gluconate reductase A; alpha/beta-bar 7e-18
3up8_A298 Putative 2,5-diketo-D-gluconic acid reductase B; n 1e-17
3h7r_A331 Aldo-keto reductase; stress response, NADP, drough 1e-17
3o3r_A316 Aldo-keto reductase family 1, member B7; aldose re 2e-17
1vbj_A281 Prostaglandin F synthase; TIM barrel, oxidoreducta 3e-17
2ao0_A324 Aldehyde dehydrogenase; TIM barrel, aldo-keto redu 3e-17
3krb_A334 Aldose reductase; ssgcid, SBRI, emerald biostructu 4e-17
1hw6_A278 2,5-diketo-D-gluconic acid reductase; aldo-keto re 6e-17
3o0k_A283 Aldo/keto reductase; ssgcid, ALS collaborative cry 6e-17
2wzm_A283 Aldo-keto reductase; oxidoreductase; HET: NA7; 1.6 7e-17
1mi3_A322 Xylose reductase, XR; aldo-keto reductase, beta-al 8e-17
3b3e_A310 YVGN protein; aldo-keto reductase, oxidoreductase; 9e-17
3f7j_A276 YVGN protein; aldo-keto reductase, oxidoreductase; 1e-16
3ln3_A324 Dihydrodiol dehydrogenase; putative reductase, str 2e-15
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 1e-04
>1pyf_A IOLS protein; beta-alpha barrel, aldo-keto reductase, TIM barrel, oxidoreductase; 1.80A {Bacillus subtilis} SCOP: c.1.7.1 PDB: 1pz0_A* Length = 312 Back     alignment and structure
 Score =  165 bits (421), Expect = 2e-49
 Identities = 79/289 (27%), Positives = 120/289 (41%), Gaps = 49/289 (16%)

Query: 40  EKVKMGP--LSASPMGFGTWAWGNQFLWGYQESMDSQLQQTFNLAVENGINLFDTADSYG 97
           +K K+G   L   P+G GT A G   L+      +   ++    A+ NG+ + DTA  YG
Sbjct: 2   KKAKLGKSDLQVFPIGLGTNAVGGHNLYPNLN--EETGKELVREAIRNGVTMLDTAYIYG 59

Query: 98  TGRLNGKSEKLLGKFISEIPGQKQVQNNIVIATKFAAYPWRLTPGQFV---------NAC 148
            GR    SE+L+G+ + E   +      +VIATK A    R     FV          + 
Sbjct: 60  IGR----SEELIGEVLREFNRED-----VVIATKAA---HRKQGNDFVFDNSPDFLKKSV 107

Query: 149 RASLARLQIEQIGIGQLHWSTANYAPPQELALWNGLVAMYEKGLVRAVGVSNYGPNQLVK 208
             SL RL  + I +  +H+   +   P++ A  N L  M + G +R++GVSN+   QL +
Sbjct: 108 DESLKRLNTDYIDLFYIHF--PDEHTPKDEA-VNALNEMKKAGKIRSIGVSNFSLEQLKE 164

Query: 209 IHDYLTARGV-PLCSAQVQFSLLSMGENQLEIKNICDSLGIRLISYSPLGLGMLTGKYTP 267
                 A     +   Q +++LL+    +           I  I Y PL  G+L GKYT 
Sbjct: 165 ------ANKDGLVDVLQGEYNLLNREAEK-TFFPYTKEHNISFIPYFPLVSGLLAGKYTE 217

Query: 268 -SKLPRGPRALLFRQILPGLKP--------LLRSLKEIAERRGKTIPQL 307
            +  P G      R      K          +  L  IAE+    IP +
Sbjct: 218 DTTFPEGD----LRNEQEHFKGERFKENIRKVNKLAPIAEKHNVDIPHI 262
>1pz1_A GSP69, general stress protein 69; beta-alpha barrel, aldo-keto reductase, TIM barrel, oxidoreductase; HET: NAP; 2.20A {Bacillus subtilis} SCOP: c.1.7.1 Length = 333 Back     alignment and structure
>3n2t_A Putative oxidoreductase; aldo/keto reductase superfamily, AKR, AKR11B4, TIM barrel; 2.00A {Gluconobacter oxydans} Length = 348 Back     alignment and structure
>3n6q_A YGHZ aldo-keto reductase; TIM barrel, oxidoreductase; 1.80A {Escherichia coli} Length = 346 Back     alignment and structure
>1ur3_M Hypothetical oxidoreductase YDHF; NADP binding, aldo-keto reductase; 2.57A {Escherichia coli} SCOP: c.1.7.1 PDB: 1og6_A* Length = 319 Back     alignment and structure
>1ynp_A Oxidoreductase, AKR11C1; aldo-keto reductase, NADPH; HET: SUC; 1.25A {Bacillus halodurans} PDB: 1ynq_A* Length = 317 Back     alignment and structure
>1gve_A Aflatoxin B1 aldehyde reductase member 3; oxidoreductase, aldo-keto reductase, succinic semialdehyde oxidoreductase, AKR7 family; HET: NAP CIT; 1.38A {Rattus norvegicus} SCOP: c.1.7.1 PDB: 2clp_A* 2c91_A* Length = 327 Back     alignment and structure
>3erp_A Putative oxidoreductase; funded by the national institute of allergy and infectious D of NIH contract number HHSN272200700058C; 1.55A {Salmonella enterica subsp} Length = 353 Back     alignment and structure
>1lqa_A TAS protein; TIM barrel, structure 2 function project, S2F, structural GE oxidoreductase; HET: NDP; 1.60A {Escherichia coli} SCOP: c.1.7.1 Length = 346 Back     alignment and structure
>3eau_A Voltage-gated potassium channel subunit beta-2; kvbeta, cortisone, NADPH, cytoplasm, ION transport, ionic channel, NADP, phosphoprotein; HET: NDP PDN; 1.82A {Rattus norvegicus} SCOP: c.1.7.1 PDB: 2r9r_A* 2a79_A* 3lnm_A* 1exb_A* 3eb4_A* 3eb3_A* 1qrq_A* 1zsx_A* Length = 327 Back     alignment and structure
>3lut_A Voltage-gated potassium channel subunit beta-2; voltage gating, potassium channel, KV1.2, gating charges, no analysis, ION transport; HET: NAP; 2.90A {Rattus norvegicus} Length = 367 Back     alignment and structure
>3v0s_A Perakine reductase; AKR superfamily, oxidoreductase; HET: MLZ M3L MLY ATR; 1.77A {Rauvolfia serpentina} PDB: 3v0u_A 3v0t_A* 3uyi_A* Length = 337 Back     alignment and structure
>1qwk_A Aldose reductase, aldo-keto reductase family 1 member C1, XH961; structural genomics, PSI, protein structure initiative; 1.60A {Caenorhabditis elegans} SCOP: c.1.7.1 Length = 317 Back     alignment and structure
>1afs_A 3-alpha-HSD, 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, NAD; HET: NAP TES; 2.50A {Rattus norvegicus} SCOP: c.1.7.1 PDB: 1lwi_A* Length = 323 Back     alignment and structure
>1s1p_A Aldo-keto reductase family 1 member C3; TIM-barrel, oxidoreductase; HET: NAP; 1.20A {Homo sapiens} SCOP: c.1.7.1 PDB: 1s1r_A* 1s2a_A* 1s2c_A* 3uwe_A* 3r58_A* 3r43_A* 3r7m_A* 3r6i_A* 3r8h_A* 3r94_A* 3r8g_A* 1zq5_A* 1ry8_A* 1xf0_A* 1ry0_A* 2f38_A* 2fgb_A* 4dbs_A* 4dbu_A* 3gug_A* ... Length = 331 Back     alignment and structure
>1zgd_A Chalcone reductase; polyketide, deoxychalcone, isoflavonoid, biosynthesis, plant protein; HET: NAP; 1.70A {Medicago sativa} Length = 312 Back     alignment and structure
>3buv_A 3-OXO-5-beta-steroid 4-dehydrogenase; 5-beta-reductase, catalytic tetrad, hepes, NADP, bIle catabolism, disease mutation, lipid metabolism; HET: NAP EPE; 1.35A {Homo sapiens} PDB: 3bur_A* 3bv7_A* 3caq_A* 3cas_A* 3cav_A* 3g1r_A* 3cot_A* 3dop_A* 3cmf_A* 3uzx_A* 3uzw_A* 3uzy_A* 3uzz_A* Length = 326 Back     alignment and structure
>3h7u_A Aldo-keto reductase; stress response, NADP, drought tolerance, oxidoreductase; HET: NAP; 1.25A {Arabidopsis thaliana} Length = 335 Back     alignment and structure
>4gie_A Prostaglandin F synthase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: NAP; 1.25A {Trypanosoma cruzi} PDB: 4fzi_A* Length = 290 Back     alignment and structure
>1us0_A Aldose reductase; oxidoreductase, NADP, IDD594; HET: NDP LDT CIT; 0.66A {Homo sapiens} SCOP: c.1.7.1 PDB: 1pwl_A* 1t41_A* 1pwm_A* 1x96_A* 1x97_A* 1x98_A* 1z89_A* 1z8a_A* 2dux_A* 2duz_A* 2dv0_A* 2fz8_A* 2fz9_A* 2fzb_A* 2fzd_A* 2hv5_A* 2hvn_A* 2hvo_A* 2i16_A* 2i17_A* ... Length = 316 Back     alignment and structure
>1vp5_A 2,5-diketo-D-gluconic acid reductase; TM1009, structural genomics, joint center for structural genomics, PSI, protein structure initiative; HET: NAP; 2.40A {Thermotoga maritima} SCOP: c.1.7.1 Length = 298 Back     alignment and structure
>4f40_A Prostaglandin F2-alpha synthase/D-arabinose dehyd; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: CIT; 1.60A {Leishmania major} Length = 288 Back     alignment and structure
>2bgs_A Aldose reductase; holoenzyme, aldo/keto reductase, oxidoreductase; HET: NDP; 1.64A {Hordeum vulgare} PDB: 2bgq_A* 2vdg_A* Length = 344 Back     alignment and structure
>1mzr_A 2,5-diketo-D-gluconate reductase A; alpha/beta-barrel, aldo-ketoreductase, NADPH dependant, BACT targets at IGS-CNRS, france, BIGS; 2.13A {Escherichia coli} SCOP: c.1.7.1 Length = 296 Back     alignment and structure
>3up8_A Putative 2,5-diketo-D-gluconic acid reductase B; nysgrc, PSI-biology, structural genomics; 1.96A {Sinorhizobium meliloti} Length = 298 Back     alignment and structure
>3h7r_A Aldo-keto reductase; stress response, NADP, drought tolerance, oxidoreductase; HET: NAP; 1.40A {Arabidopsis thaliana} Length = 331 Back     alignment and structure
>3o3r_A Aldo-keto reductase family 1, member B7; aldose reductase like protein, AKR1B14, oxidoreductase; HET: NAP; 1.86A {Rattus norvegicus} PDB: 3qkz_A* Length = 316 Back     alignment and structure
>1vbj_A Prostaglandin F synthase; TIM barrel, oxidoreductase; HET: NAP CIT; 2.10A {Trypanosoma brucei} Length = 281 Back     alignment and structure
>3krb_A Aldose reductase; ssgcid, SBRI, emerald biostructures, university of washingto niaid, oxidoreductase, S genomics; HET: NAP; 1.75A {Giardia lamblia} Length = 334 Back     alignment and structure
>1hw6_A 2,5-diketo-D-gluconic acid reductase; aldo-keto reductase, TIM barrel, oxidoreductase; 1.90A {Corynebacterium SP} SCOP: c.1.7.1 PDB: 1a80_A* 1m9h_A* Length = 278 Back     alignment and structure
>3o0k_A Aldo/keto reductase; ssgcid, ALS collaborative crystallography; 1.80A {Brucella melitensis biovar} Length = 283 Back     alignment and structure
>2wzm_A Aldo-keto reductase; oxidoreductase; HET: NA7; 1.64A {Mycobacterium smegmatis} PDB: 2wzt_A Length = 283 Back     alignment and structure
>1mi3_A Xylose reductase, XR; aldo-keto reductase, beta-alpha barrel, dimer, oxidoreductase; HET: NAD; 1.80A {Candida tenuis} SCOP: c.1.7.1 PDB: 1jez_A* 1k8c_A* 1ye6_A* 1ye4_A* 1sm9_A* 1r38_A* 1z9a_A* Length = 322 Back     alignment and structure
>3f7j_A YVGN protein; aldo-keto reductase, oxidoreductase; 1.70A {Bacillus subtilis} PDB: 3d3f_A* Length = 276 Back     alignment and structure
>3ln3_A Dihydrodiol dehydrogenase; putative reductase, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; HET: MLY MSE NAD; 1.18A {Mus musculus} Length = 324 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query308
3lut_A367 Voltage-gated potassium channel subunit beta-2; vo 100.0
3eau_A327 Voltage-gated potassium channel subunit beta-2; kv 100.0
3erp_A353 Putative oxidoreductase; funded by the national in 100.0
3n6q_A346 YGHZ aldo-keto reductase; TIM barrel, oxidoreducta 100.0
1pyf_A312 IOLS protein; beta-alpha barrel, aldo-keto reducta 100.0
3n2t_A348 Putative oxidoreductase; aldo/keto reductase super 100.0
1lqa_A346 TAS protein; TIM barrel, structure 2 function proj 100.0
1pz1_A333 GSP69, general stress protein 69; beta-alpha barre 100.0
3v0s_A337 Perakine reductase; AKR superfamily, oxidoreductas 100.0
1ur3_M319 Hypothetical oxidoreductase YDHF; NADP binding, al 100.0
3f7j_A276 YVGN protein; aldo-keto reductase, oxidoreductase; 100.0
3o0k_A283 Aldo/keto reductase; ssgcid, ALS collaborative cry 100.0
3b3e_A310 YVGN protein; aldo-keto reductase, oxidoreductase; 100.0
2bp1_A360 Aflatoxin B1 aldehyde reductase member 2; oxidored 100.0
1ynp_A317 Oxidoreductase, AKR11C1; aldo-keto reductase, NADP 100.0
1vbj_A281 Prostaglandin F synthase; TIM barrel, oxidoreducta 100.0
1gve_A327 Aflatoxin B1 aldehyde reductase member 3; oxidored 100.0
4f40_A288 Prostaglandin F2-alpha synthase/D-arabinose dehyd; 100.0
1hw6_A278 2,5-diketo-D-gluconic acid reductase; aldo-keto re 100.0
2wzm_A283 Aldo-keto reductase; oxidoreductase; HET: NA7; 1.6 100.0
3up8_A298 Putative 2,5-diketo-D-gluconic acid reductase B; n 100.0
3buv_A326 3-OXO-5-beta-steroid 4-dehydrogenase; 5-beta-reduc 100.0
3ln3_A324 Dihydrodiol dehydrogenase; putative reductase, str 100.0
1afs_A323 3-alpha-HSD, 3-alpha-hydroxysteroid dehydrogenase; 100.0
4gie_A290 Prostaglandin F synthase; structural genomics, nia 100.0
4exb_A292 Putative uncharacterized protein; aldo-keto reduct 100.0
1mzr_A296 2,5-diketo-D-gluconate reductase A; alpha/beta-bar 100.0
1s1p_A331 Aldo-keto reductase family 1 member C3; TIM-barrel 100.0
1qwk_A317 Aldose reductase, aldo-keto reductase family 1 mem 100.0
3h7u_A335 Aldo-keto reductase; stress response, NADP, drough 100.0
3krb_A334 Aldose reductase; ssgcid, SBRI, emerald biostructu 100.0
1zgd_A312 Chalcone reductase; polyketide, deoxychalcone, iso 100.0
1us0_A316 Aldose reductase; oxidoreductase, NADP, IDD594; HE 100.0
1mi3_A322 Xylose reductase, XR; aldo-keto reductase, beta-al 100.0
3o3r_A316 Aldo-keto reductase family 1, member B7; aldose re 100.0
3b3d_A314 YTBE protein, putative morphine dehydrogenase; ald 100.0
1vp5_A298 2,5-diketo-D-gluconic acid reductase; TM1009, stru 100.0
3h7r_A331 Aldo-keto reductase; stress response, NADP, drough 100.0
2bgs_A344 Aldose reductase; holoenzyme, aldo/keto reductase, 100.0
4gac_A324 Alcohol dehydrogenase [NADP(+)]; TIM barrel, aldhe 100.0
3cf4_A 807 Acetyl-COA decarboxylase/synthase alpha subunit; m 97.66
3i4k_A383 Muconate lactonizing enzyme; structural genomics, 89.42
3gd6_A391 Muconate cycloisomerase; structural genomics, NYSG 87.99
2ovl_A371 Putative racemase; structural genomics, PSI-2, pro 87.4
2rdx_A379 Mandelate racemase/muconate lactonizing enzyme, P; 86.84
2zad_A345 Muconate cycloisomerase; muconate lactonizing enzy 86.81
1tkk_A366 Similar to chloromuconate cycloisomerase; epimeras 86.2
1nu5_A370 Chloromuconate cycloisomerase; enzyme, dehalogenat 86.07
1r0m_A375 N-acylamino acid racemase; isomerase; 1.30A {Deino 85.96
2pgw_A384 Muconate cycloisomerase; enolase superfamily, octa 85.81
3mwc_A400 Mandelate racemase/muconate lactonizing protein; e 85.8
2o56_A407 Putative mandelate racemase; dehydratase, structur 84.7
2p8b_A369 Mandelate racemase/muconate lactonizing enzyme fam 84.61
3i6e_A385 Muconate cycloisomerase I; structural genomics, NY 84.47
3q45_A368 Mandelate racemase/muconate lactonizing enzyme FA 84.34
2nql_A388 AGR_PAT_674P, isomerase/lactonizing enzyme; enolas 84.33
2qgy_A391 Enolase from the environmental genome shotgun sequ 84.27
1mdl_A359 Mandelate racemase; isomerase, mandelate pathway, 84.23
3dg3_A367 Muconate cycloisomerase; muconate lactonizing enzy 83.7
3p6l_A262 Sugar phosphate isomerase/epimerase; TIM barrel, s 83.21
2og9_A393 Mandelate racemase/muconate lactonizing enzyme; NY 82.97
1sjd_A368 N-acylamino acid racemase; lyase, isomerase; HET: 82.89
3jva_A354 Dipeptide epimerase; enolase superfamily, isomeras 82.8
2qde_A397 Mandelate racemase/muconate lactonizing enzyme FA 82.75
3ik4_A365 Mandelate racemase/muconate lactonizing protein; s 82.27
2poz_A392 Putative dehydratase; octamer, structural genomics 81.84
2hzg_A401 Mandelate racemase/muconate lactonizing enzyme/EN 80.86
3rr1_A405 GALD, putative D-galactonate dehydratase; enolase, 80.6
2pp0_A398 L-talarate/galactarate dehydratase; enolase superf 80.59
3qld_A388 Mandelate racemase/muconate lactonizing protein; s 80.57
>3lut_A Voltage-gated potassium channel subunit beta-2; voltage gating, potassium channel, KV1.2, gating charges, no analysis, ION transport; HET: NAP; 2.90A {Rattus norvegicus} Back     alignment and structure
Probab=100.00  E-value=5.6e-56  Score=414.98  Aligned_cols=253  Identities=27%  Similarity=0.463  Sum_probs=211.6

Q ss_pred             CCcceeecC--CceeCcceeccC-ccCCCCcCCCCCCcHHHHHHHHHHHHHcCCCceeCCcCCCCCCCCCchHHHHHHHH
Q 021767           37 WPWEKVKMG--PLSASPMGFGTW-AWGNQFLWGYQESMDSQLQQTFNLAVENGINLFDTADSYGTGRLNGKSEKLLGKFI  113 (308)
Q Consensus        37 ~~m~~~~lg--g~~vs~lglG~~-~~g~~~~~~~~~~~~~~~~~~l~~A~e~Gi~~~DtA~~Yg~~~~~g~sE~~lG~~L  113 (308)
                      ..| |++||  |++||+|||||| .+|+       ..+++++.++|+.|++.|||+||||+.||+    |.||+.||++|
T Consensus        36 ~~m-yr~lG~tg~~vs~iglGt~~~~g~-------~~~~~~~~~~l~~Al~~Gi~~~DTA~~Yg~----G~sE~~lG~al  103 (367)
T 3lut_A           36 LQF-YRNLGKSGLRVSCLGLGTWVTFGG-------QITDEMAEHLMTLAYDNGINLFDTAEVYAA----GKAEVVLGNII  103 (367)
T ss_dssp             CCS-EEESTTSSCEEESEEEECTTCCCC-------CSCHHHHHHHHHHHHHTTCCEEEEETTGGG----GHHHHHHHHHH
T ss_pred             hhc-eeecCCCCCcccceeECCccccCC-------CCCHHHHHHHHHHHHHcCCCEEECccccCC----CchHHHHHHHH
Confidence            359 99999  999999999998 4442       256788999999999999999999999998    99999999999


Q ss_pred             hhCCCCCCCCCCEEEEeccCCCC-----CCCChHHHHHHHHHHHHhhCCCcccEEEecCCCCCCCChhHHHHHHHHHHHH
Q 021767          114 SEIPGQKQVQNNIVIATKFAAYP-----WRLTPGQFVNACRASLARLQIEQIGIGQLHWSTANYAPPQELALWNGLVAMY  188 (308)
Q Consensus       114 ~~~~~~~~~R~~v~i~tK~~~~~-----~~~~~~~i~~~~e~sL~~L~~d~iDl~~lH~~~~~~~~~~~~~~~~~l~~l~  188 (308)
                      ++..   ++|+++||+||++...     .+.+++.+++++++||++||+||||||++|||+.. .+.  +++|++|++|+
T Consensus       104 ~~~~---~~R~~v~I~TK~~~~~~~~~~~~~s~~~i~~~~e~SL~rLg~dyiDl~~lH~pd~~-~~~--~e~~~al~~l~  177 (367)
T 3lut_A          104 KKKG---WRRSSLVITTKIFWGGKAETERGLSRKHIIEGLKASLERLQLEYVDVVFANRPDPN-TPM--EETVRAMTHVI  177 (367)
T ss_dssp             HHHT---CCGGGCEEEEEESBCCSSGGGBSSCHHHHHHHHHHHHHHHTCSCEEEEEESSCCTT-SCH--HHHHHHHHHHH
T ss_pred             HhCC---CCCceEEEEeccccCCCCccCCCCCHHHHHHHHHHHHHHhCCCccceEEecCCCCC-CCH--HHHHHHHHHHH
Confidence            8742   5799999999995421     24579999999999999999999999999999754 343  45999999999


Q ss_pred             HcCCccEEEeecCCHHHHHHHHHHHHHcC-CCceeeeeccCcccCCcchhhHHHHHHHhCCcEEEcccccccccCCCCCC
Q 021767          189 EKGLVRAVGVSNYGPNQLVKIHDYLTARG-VPLCSAQVQFSLLSMGENQLEIKNICDSLGIRLISYSPLGLGMLTGKYTP  267 (308)
Q Consensus       189 ~~G~ir~iGvSn~~~~~l~~~~~~~~~~~-~~~~~~Q~~~~~~~~~~~~~~l~~~~~~~gi~v~a~spl~~G~L~~~~~~  267 (308)
                      ++||||+||||||+.+++.++...++..+ ++|+++|++||++++...+.+++++|+++||++++|+||++|+|+++|..
T Consensus       178 ~~Gkir~iGvSn~~~~~l~~~~~~~~~~~~~~~~~~Q~~~~~~~~~~~e~~l~~~~~~~gi~v~a~spL~~G~Ltgk~~~  257 (367)
T 3lut_A          178 NQGMAMYWGTSRWSSMEIMEAYSVARQFNLIPPICEQAEYHMFQREKVEVQLPELFHKIGVGAMTWSPLACGIVSGKYDS  257 (367)
T ss_dssp             HTTSEEEEEEESCCHHHHHHHHHHHHHHTCCCCCEEEEECBTTBCHHHHTHHHHHHHHHCCEEEEECTTGGGGGGTTTTT
T ss_pred             HcCCeeEEEecCCCHHHHHHHHHHHHHcCCCCceeeeccccceecchhHhHHHHHHHHcCCeEEEecccccccccCCcCC
Confidence            99999999999999999999988876655 58999999999998876444899999999999999999999999999976


Q ss_pred             CCCCCCchhhh--h--------hccccChHHHHHHHHHHHHHhCCCcccCC
Q 021767          268 SKLPRGPRALL--F--------RQILPGLKPLLRSLKEIAERRGKTIPQLL  308 (308)
Q Consensus       268 ~~~~~~~~~~~--~--------~~~~~~~~~~~~~l~~ia~~~g~s~aqva  308 (308)
                      ..++ ..+...  +        ..........++.|+++|++||+|++|||
T Consensus       258 ~~~~-~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~iA~~~g~t~aqva  307 (367)
T 3lut_A          258 GIPP-YSRASLKGYQWLKDKILSEEGRRQQAKLKELQAIAERLGCTLPQLA  307 (367)
T ss_dssp             SCCT-TSGGGSTTCHHHHHHHTSHHHHHHHHHHHHHHHHHHHTTSCHHHHH
T ss_pred             CCCC-cccccccccccccccccchhhHHHHHHHHHHHHHHHHhCCCHHHHH
Confidence            5332 222210  1        01112234567899999999999999985
>3eau_A Voltage-gated potassium channel subunit beta-2; kvbeta, cortisone, NADPH, cytoplasm, ION transport, ionic channel, NADP, phosphoprotein; HET: NDP PDN; 1.82A {Rattus norvegicus} SCOP: c.1.7.1 PDB: 2r9r_A* 2a79_A* 3lnm_A* 1exb_A* 3eb4_A* 3eb3_A* 1qrq_A* 1zsx_A* Back     alignment and structure
>3erp_A Putative oxidoreductase; funded by the national institute of allergy and infectious D of NIH contract number HHSN272200700058C; 1.55A {Salmonella enterica subsp} Back     alignment and structure
>3n6q_A YGHZ aldo-keto reductase; TIM barrel, oxidoreductase; 1.80A {Escherichia coli} SCOP: c.1.7.0 PDB: 4ast_A 4aub_A* Back     alignment and structure
>1pyf_A IOLS protein; beta-alpha barrel, aldo-keto reductase, TIM barrel, oxidoreductase; 1.80A {Bacillus subtilis} SCOP: c.1.7.1 PDB: 1pz0_A* Back     alignment and structure
>3n2t_A Putative oxidoreductase; aldo/keto reductase superfamily, AKR, AKR11B4, TIM barrel; 2.00A {Gluconobacter oxydans} SCOP: c.1.7.0 Back     alignment and structure
>1lqa_A TAS protein; TIM barrel, structure 2 function project, S2F, structural GE oxidoreductase; HET: NDP; 1.60A {Escherichia coli} SCOP: c.1.7.1 Back     alignment and structure
>1pz1_A GSP69, general stress protein 69; beta-alpha barrel, aldo-keto reductase, TIM barrel, oxidoreductase; HET: NAP; 2.20A {Bacillus subtilis} SCOP: c.1.7.1 Back     alignment and structure
>3v0s_A Perakine reductase; AKR superfamily, oxidoreductase; HET: MLZ M3L MLY ATR; 1.77A {Rauvolfia serpentina} PDB: 3v0u_A 3v0t_A* 3uyi_A* Back     alignment and structure
>1ur3_M Hypothetical oxidoreductase YDHF; NADP binding, aldo-keto reductase; 2.57A {Escherichia coli} SCOP: c.1.7.1 PDB: 1og6_A* Back     alignment and structure
>3f7j_A YVGN protein; aldo-keto reductase, oxidoreductase; 1.70A {Bacillus subtilis} PDB: 3d3f_A* Back     alignment and structure
>3o0k_A Aldo/keto reductase; ssgcid, ALS collaborative crystallography; 1.80A {Brucella melitensis biovar} Back     alignment and structure
>1ynp_A Oxidoreductase, AKR11C1; aldo-keto reductase, NADPH; HET: SUC; 1.25A {Bacillus halodurans} PDB: 1ynq_A* Back     alignment and structure
>1vbj_A Prostaglandin F synthase; TIM barrel, oxidoreductase; HET: NAP CIT; 2.10A {Trypanosoma brucei} Back     alignment and structure
>1gve_A Aflatoxin B1 aldehyde reductase member 3; oxidoreductase, aldo-keto reductase, succinic semialdehyde oxidoreductase, AKR7 family; HET: NAP CIT; 1.38A {Rattus norvegicus} SCOP: c.1.7.1 PDB: 2clp_A* 2c91_A* Back     alignment and structure
>4f40_A Prostaglandin F2-alpha synthase/D-arabinose dehyd; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: CIT; 1.60A {Leishmania major} PDB: 4g5d_A* Back     alignment and structure
>1hw6_A 2,5-diketo-D-gluconic acid reductase; aldo-keto reductase, TIM barrel, oxidoreductase; 1.90A {Corynebacterium SP} SCOP: c.1.7.1 PDB: 1a80_A* 1m9h_A* Back     alignment and structure
>2wzm_A Aldo-keto reductase; oxidoreductase; HET: NA7; 1.64A {Mycobacterium smegmatis} PDB: 2wzt_A Back     alignment and structure
>3up8_A Putative 2,5-diketo-D-gluconic acid reductase B; nysgrc, PSI-biology, structural genomics; 1.96A {Sinorhizobium meliloti} Back     alignment and structure
>3buv_A 3-OXO-5-beta-steroid 4-dehydrogenase; 5-beta-reductase, catalytic tetrad, hepes, NADP, bIle catabolism, disease mutation, lipid metabolism; HET: NAP EPE; 1.35A {Homo sapiens} PDB: 3bur_A* 3bv7_A* 3caq_A* 3cas_A* 3cav_A* 3g1r_A* 3cot_A* 3dop_A* 3cmf_A* 3uzx_A* 3uzw_A* 3uzy_A* 3uzz_A* Back     alignment and structure
>3ln3_A Dihydrodiol dehydrogenase; putative reductase, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; HET: MLY MSE NAD; 1.18A {Mus musculus} SCOP: c.1.7.1 Back     alignment and structure
>1afs_A 3-alpha-HSD, 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, NAD; HET: NAP TES; 2.50A {Rattus norvegicus} SCOP: c.1.7.1 PDB: 1lwi_A* Back     alignment and structure
>4gie_A Prostaglandin F synthase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: NAP; 1.25A {Trypanosoma cruzi} PDB: 4fzi_A* Back     alignment and structure
>4exb_A Putative uncharacterized protein; aldo-keto reductase, NADP+ binding, oxidoreducta; 2.75A {Pseudomonas aeruginosa} PDB: 4exa_A Back     alignment and structure
>1mzr_A 2,5-diketo-D-gluconate reductase A; alpha/beta-barrel, aldo-ketoreductase, NADPH dependant, BACT targets at IGS-CNRS, france, BIGS; 2.13A {Escherichia coli} SCOP: c.1.7.1 Back     alignment and structure
>1s1p_A Aldo-keto reductase family 1 member C3; TIM-barrel, oxidoreductase; HET: NAP; 1.20A {Homo sapiens} SCOP: c.1.7.1 PDB: 1s1r_A* 1s2a_A* 1s2c_A* 3uwe_A* 3r58_A* 3r43_A* 3r7m_A* 3r6i_A* 3r8h_A* 3r94_A* 3r8g_A* 1zq5_A* 1ry8_A* 1xf0_A* 1ry0_A* 2f38_A* 2fgb_A* 4dbs_A* 4dbu_A* 3gug_A* ... Back     alignment and structure
>1qwk_A Aldose reductase, aldo-keto reductase family 1 member C1, XH961; structural genomics, PSI, protein structure initiative; 1.60A {Caenorhabditis elegans} SCOP: c.1.7.1 Back     alignment and structure
>3h7u_A Aldo-keto reductase; stress response, NADP, drought tolerance, oxidoreductase; HET: NAP; 1.25A {Arabidopsis thaliana} Back     alignment and structure
>3krb_A Aldose reductase; ssgcid, SBRI, emerald biostructures, university of washingto niaid, oxidoreductase, S genomics; HET: NAP; 1.75A {Giardia lamblia} Back     alignment and structure
>1zgd_A Chalcone reductase; polyketide, deoxychalcone, isoflavonoid, biosynthesis, plant protein; HET: NAP; 1.70A {Medicago sativa} Back     alignment and structure
>1us0_A Aldose reductase; oxidoreductase, NADP, IDD594; HET: NDP LDT CIT; 0.66A {Homo sapiens} SCOP: c.1.7.1 PDB: 1pwl_A* 1t41_A* 1pwm_A* 1x96_A* 1x97_A* 1x98_A* 1z89_A* 1z8a_A* 2dux_A* 2duz_A* 2dv0_A* 2fz8_A* 2fz9_A* 2fzb_A* 2fzd_A* 2hv5_A* 2hvn_A* 2hvo_A* 2i16_A* 2i17_A* ... Back     alignment and structure
>1mi3_A Xylose reductase, XR; aldo-keto reductase, beta-alpha barrel, dimer, oxidoreductase; HET: NAD; 1.80A {Candida tenuis} SCOP: c.1.7.1 PDB: 1jez_A* 1k8c_A* 1ye6_A* 1ye4_A* 1sm9_A* 1r38_A* 1z9a_A* Back     alignment and structure
>3o3r_A Aldo-keto reductase family 1, member B7; aldose reductase like protein, AKR1B14, oxidoreductase; HET: NAP; 1.86A {Rattus norvegicus} SCOP: c.1.7.1 PDB: 3qkz_A* Back     alignment and structure
>3b3d_A YTBE protein, putative morphine dehydrogenase; aldo-keto reductase, oxidoreductase; 2.30A {Bacillus subtilis} Back     alignment and structure
>1vp5_A 2,5-diketo-D-gluconic acid reductase; TM1009, structural genomics, joint center for structural genomics, PSI, protein structure initiative; HET: NAP; 2.40A {Thermotoga maritima} SCOP: c.1.7.1 Back     alignment and structure
>3h7r_A Aldo-keto reductase; stress response, NADP, drought tolerance, oxidoreductase; HET: NAP; 1.40A {Arabidopsis thaliana} Back     alignment and structure
>2bgs_A Aldose reductase; holoenzyme, aldo/keto reductase, oxidoreductase; HET: NDP; 1.64A {Hordeum vulgare} PDB: 2bgq_A* 2vdg_A* Back     alignment and structure
>4gac_A Alcohol dehydrogenase [NADP(+)]; TIM barrel, aldheyde reductase AKR1A4, SMAR1, oxidoreductase; HET: FLC; 1.64A {Mus musculus} PDB: 2alr_A 3h4g_A* 3cv7_A* 3fx4_A* 1ae4_A* 1cwn_A* 1hqt_A* Back     alignment and structure
>3cf4_A Acetyl-COA decarboxylase/synthase alpha subunit; methanomicrobia, iron-nikel-sulfur, 4Fe-NI-4S, oxidoreductas; 2.00A {Methanosarcina barkeri} Back     alignment and structure
>3i4k_A Muconate lactonizing enzyme; structural genomics, NYSGXRC, target 9450D, isomerase, PSI-2, protein structure initiative; 2.20A {Corynebacterium glutamicum} Back     alignment and structure
>3gd6_A Muconate cycloisomerase; structural genomics, NYSGXRC, target 9375A, divergent enolase, lyase, PSI-2; 1.60A {Oceanobacillus iheyensis HTE831} PDB: 2oqy_A 3es8_A 3es7_A 3fyy_A 3hpf_A* Back     alignment and structure
>2ovl_A Putative racemase; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.13A {Streptomyces coelicolor A3} PDB: 3ck5_A Back     alignment and structure
>2rdx_A Mandelate racemase/muconate lactonizing enzyme, P; enolase, structural genomics, PSI, protein structu initiative, nysgrc; 2.00A {Roseovarius nubinhibens} Back     alignment and structure
>2zad_A Muconate cycloisomerase; muconate lactonizing enzyme (MLE), TM0006, struct genomics, NPPSFA; HET: 1PE; 1.60A {Thermotoga maritima} PDB: 3deq_A 3der_A* 3des_A* 3dfy_A Back     alignment and structure
>1tkk_A Similar to chloromuconate cycloisomerase; epimerase, enolase super family,; 2.10A {Bacillus subtilis} SCOP: c.1.11.2 d.54.1.1 PDB: 1jpm_A Back     alignment and structure
>1nu5_A Chloromuconate cycloisomerase; enzyme, dehalogenation; 1.95A {Pseudomonas SP} SCOP: c.1.11.2 d.54.1.1 Back     alignment and structure
>1r0m_A N-acylamino acid racemase; isomerase; 1.30A {Deinococcus radiodurans} SCOP: c.1.11.2 d.54.1.1 PDB: 1xpy_A* 1xs2_A 2ggj_A 2ggi_A 2ggh_A* 2ggg_A* 2fkp_A Back     alignment and structure
>2pgw_A Muconate cycloisomerase; enolase superfamily, octamer, small metabolism, PSI-II, NYSGXRC, structural genomics, PR structure initiative; 1.95A {Sinorhizobium meliloti} Back     alignment and structure
>3mwc_A Mandelate racemase/muconate lactonizing protein; enolase, structural genomics, protein structure initiative, nysgrc; 1.80A {Kosmotoga olearia} Back     alignment and structure
>2o56_A Putative mandelate racemase; dehydratase, structural genomics, protein structure initiati 2; 2.00A {Salmonella typhimurium} Back     alignment and structure
>2p8b_A Mandelate racemase/muconate lactonizing enzyme family protein; enolase superfamily, prediction of function; HET: NSK; 1.70A {Bacillus cereus atcc 14579} PDB: 2p88_A* 2p8c_A* Back     alignment and structure
>3i6e_A Muconate cycloisomerase I; structural genomics, NYSGXRC, targer 9468A, muconate lactonizing enzyme, PSI-2, protein structure initiative; 1.70A {Ruegeria pomeroyi} PDB: 3i6t_A Back     alignment and structure
>3q45_A Mandelate racemase/muconate lactonizing enzyme FA possible chloromuconate cycloisomerase...; (beta/alpha)8-barrel; 3.00A {Cytophaga hutchinsonii} PDB: 3q4d_A Back     alignment and structure
>2nql_A AGR_PAT_674P, isomerase/lactonizing enzyme; enolase, structural genomics, protein structure initiative, nysgxrc; 1.80A {Agrobacterium tumefaciens str} PDB: 4dn1_A Back     alignment and structure
>2qgy_A Enolase from the environmental genome shotgun sequencing of the sargasso SEA; structural genomics, unknown function, PSI-2; 1.80A {Environmental sample} Back     alignment and structure
>1mdl_A Mandelate racemase; isomerase, mandelate pathway, magnesium; HET: RMN SMN; 1.85A {Pseudomonas aeruginosa} SCOP: c.1.11.2 d.54.1.1 PDB: 1mdr_A* 3uxk_A* 3uxl_A* 1dtn_A* 1mra_A* 2mnr_A 1mns_A Back     alignment and structure
>3dg3_A Muconate cycloisomerase; muconate lactonizing enzyme, muconolactone binding; 1.60A {Mycobacterium smegmatis} PDB: 3dg6_A* 3dg7_A* Back     alignment and structure
>3p6l_A Sugar phosphate isomerase/epimerase; TIM barrel, structural genomics, joint center for structural genomics, JCSG; HET: CIT; 1.85A {Parabacteroides distasonis} Back     alignment and structure
>2og9_A Mandelate racemase/muconate lactonizing enzyme; NYSGXRC, protein structure initiative (PSI) II, PSI-2, 9382A mandelate racemase; 1.90A {Polaromonas SP} PDB: 3cb3_A* Back     alignment and structure
>1sjd_A N-acylamino acid racemase; lyase, isomerase; HET: NPG; 1.87A {Amycolatopsis SP} SCOP: c.1.11.2 d.54.1.1 PDB: 1sja_A* 1sjb_A* 1sjc_A* Back     alignment and structure
>3jva_A Dipeptide epimerase; enolase superfamily, isomerase; 1.70A {Enterococcus faecalis V583} PDB: 3jw7_A* 3jzu_A* 3k1g_A* 3kum_A* Back     alignment and structure
>2qde_A Mandelate racemase/muconate lactonizing enzyme FA protein; PSI-II, NYSGXRC, enolase, structural genomics, protei structure initiative, PSI-2; 1.93A {Azoarcus SP} Back     alignment and structure
>3ik4_A Mandelate racemase/muconate lactonizing protein; structural genomics, enolase, epimerase, PSI-2, protein STRU initiative; 2.10A {Herpetosiphon aurantiacus atcc 23779} Back     alignment and structure
>2poz_A Putative dehydratase; octamer, structural genomics, P protein structure initiative, NEW YORK SGX research center structural genomics, nysgxrc; 2.04A {Mesorhizobium loti} Back     alignment and structure
>2hzg_A Mandelate racemase/muconate lactonizing enzyme/EN superfamily; structural genomics, predicted mandelate racemase, PSI; 2.02A {Rhodobacter sphaeroides} Back     alignment and structure
>3rr1_A GALD, putative D-galactonate dehydratase; enolase, magnesium binding site, lyase; 1.95A {Ralstonia pickettii} PDB: 3rra_A Back     alignment and structure
>2pp0_A L-talarate/galactarate dehydratase; enolase superfamily, LYA; 2.20A {Salmonella typhimurium} PDB: 2pp1_A* 2pp3_A* Back     alignment and structure
>3qld_A Mandelate racemase/muconate lactonizing protein; structural genomics, PSI-2, isomerase; HET: MSE; 1.85A {Alicyclobacillus acidocaldarius LAA1} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 308
d1lqaa_346 c.1.7.1 (A:) Tas protein {Escherichia coli [TaxId: 6e-35
d1pyfa_311 c.1.7.1 (A:) Putative oxidoreductase IolS {Bacillu 3e-26
d3eaua1326 c.1.7.1 (A:36-361) Voltage-dependent K+ channel be 2e-24
d1us0a_314 c.1.7.1 (A:) Aldose reductase (aldehyde reductase) 2e-19
d1s1pa_315 c.1.7.1 (A:) Prostaglandin d2 11-ketoreductase (ak 3e-19
d1hqta_324 c.1.7.1 (A:) Aldose reductase (aldehyde reductase) 4e-18
d1afsa_319 c.1.7.1 (A:) 3-alpha-hydroxysteroid dehydrogenase 2e-17
d1gvea_324 c.1.7.1 (A:) Aflatoxin aldehyde reductase (akr7a1) 1e-15
d1mzra_274 c.1.7.1 (A:) 2,5-diketo-D-gluconic acid reductase 7e-15
d1qwka_312 c.1.7.1 (A:) Hypothetical protein C07D8.6 {Nematod 2e-14
d1pz1a_333 c.1.7.1 (A:) Putative oxidoreductase YhdN {Bacillu 4e-14
d1frba_315 c.1.7.1 (A:) FR-1 (fibroblast growth factor-induce 4e-13
d1ur3m_298 c.1.7.1 (M:) Hypothetical oxidoreductase YdhF {Esc 4e-13
d1mi3a_319 c.1.7.1 (A:) Xylose reductase {Fungi (Candida tenu 1e-12
d1vp5a_284 c.1.7.1 (A:) 2,5-diketo-D-gluconic acid reductase 1e-11
d1hw6a_262 c.1.7.1 (A:) 2,5-diketo-D-gluconic acid reductase 3e-08
>d1lqaa_ c.1.7.1 (A:) Tas protein {Escherichia coli [TaxId: 562]} Length = 346 Back     information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: NAD(P)-linked oxidoreductase
family: Aldo-keto reductases (NADP)
domain: Tas protein
species: Escherichia coli [TaxId: 562]

 Score =  127 bits (320), Expect = 6e-35
 Identities = 66/289 (22%), Positives = 114/289 (39%), Gaps = 36/289 (12%)

Query: 47  LSASPMGFGTWAWGNQFLWGYQESMDSQLQQTFNLAVENGINLFDTADSYGTG---RLNG 103
           L  S +G GT  +G Q       + ++      + AV  GINL D A+ Y         G
Sbjct: 11  LEVSTLGLGTMTFGEQ-------NSEADAHAQLDYAVAQGINLIDVAEMYPVPPRPETQG 63

Query: 104 KSEKLLGKFISEIPGQKQVQNNIVIA------TKFAAYPWRLTPGQFVNACRASLARLQI 157
            +E  +G ++++   ++++     ++       K       L       A   SL RLQ 
Sbjct: 64  LTETYVGNWLAKHGSREKLIIASKVSGPSRNNDKGIRPDQALDRKNIREALHDSLKRLQT 123

Query: 158 EQIGIGQLHWS--------------TANYAPPQELALWNGLVAMYEKGLVRAVGVSNYGP 203
           + + + Q+HW               T +      L   + L      G +R +GVSN   
Sbjct: 124 DYLDLYQVHWPQRPTNCFGKLGYSWTDSAPAVSLLDTLDALAEYQRAGKIRYIGVSNETA 183

Query: 204 NQLVKIHDYLTARGVP-LCSAQVQFSLLSMGENQLEIKNICDSLGIRLISYSPLGLGMLT 262
             +++         +P + + Q  +SLL+    ++ +  +    G+ L++YS LG G LT
Sbjct: 184 FGVMRYLHLADKHDLPRIVTIQNPYSLLNR-SFEVGLAEVSQYEGVELLAYSCLGFGTLT 242

Query: 263 GKYTPSKLPRGPRALLFRQILPG----LKPLLRSLKEIAERRGKTIPQL 307
           GKY     P G R  LF +         +  + +  +IA R G    Q+
Sbjct: 243 GKYLNGAKPAGARNTLFSRFTRYSGEQTQKAVAAYVDIARRHGLDPAQM 291
>d1pyfa_ c.1.7.1 (A:) Putative oxidoreductase IolS {Bacillus subtilis [TaxId: 1423]} Length = 311 Back     information, alignment and structure
>d3eaua1 c.1.7.1 (A:36-361) Voltage-dependent K+ channel beta subunit {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 326 Back     information, alignment and structure
>d1us0a_ c.1.7.1 (A:) Aldose reductase (aldehyde reductase) {Human (Homo sapiens) [TaxId: 9606]} Length = 314 Back     information, alignment and structure
>d1s1pa_ c.1.7.1 (A:) Prostaglandin d2 11-ketoreductase (akr1c3) {Human (Homo sapiens) [TaxId: 9606]} Length = 315 Back     information, alignment and structure
>d1hqta_ c.1.7.1 (A:) Aldose reductase (aldehyde reductase) {Pig (Sus scrofa) [TaxId: 9823]} Length = 324 Back     information, alignment and structure
>d1afsa_ c.1.7.1 (A:) 3-alpha-hydroxysteroid dehydrogenase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 319 Back     information, alignment and structure
>d1mzra_ c.1.7.1 (A:) 2,5-diketo-D-gluconic acid reductase A {Escherichia coli [TaxId: 562]} Length = 274 Back     information, alignment and structure
>d1qwka_ c.1.7.1 (A:) Hypothetical protein C07D8.6 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 312 Back     information, alignment and structure
>d1pz1a_ c.1.7.1 (A:) Putative oxidoreductase YhdN {Bacillus subtilis [TaxId: 1423]} Length = 333 Back     information, alignment and structure
>d1frba_ c.1.7.1 (A:) FR-1 (fibroblast growth factor-induced) protein {Mouse (Mus musculus) [TaxId: 10090]} Length = 315 Back     information, alignment and structure
>d1ur3m_ c.1.7.1 (M:) Hypothetical oxidoreductase YdhF {Escherichia coli [TaxId: 562]} Length = 298 Back     information, alignment and structure
>d1mi3a_ c.1.7.1 (A:) Xylose reductase {Fungi (Candida tenuis) [TaxId: 45596]} Length = 319 Back     information, alignment and structure
>d1vp5a_ c.1.7.1 (A:) 2,5-diketo-D-gluconic acid reductase A {Thermotoga maritima [TaxId: 2336]} Length = 284 Back     information, alignment and structure
>d1hw6a_ c.1.7.1 (A:) 2,5-diketo-D-gluconic acid reductase A {Corynebacterium sp. [TaxId: 1720]} Length = 262 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query308
d1lqaa_346 Tas protein {Escherichia coli [TaxId: 562]} 100.0
d1pyfa_311 Putative oxidoreductase IolS {Bacillus subtilis [T 100.0
d1gvea_324 Aflatoxin aldehyde reductase (akr7a1) {Rat (Rattus 100.0
d1pz1a_333 Putative oxidoreductase YhdN {Bacillus subtilis [T 100.0
d3eaua1326 Voltage-dependent K+ channel beta subunit {Rat (Ra 100.0
d1ur3m_298 Hypothetical oxidoreductase YdhF {Escherichia coli 100.0
d1hw6a_262 2,5-diketo-D-gluconic acid reductase A {Corynebact 100.0
d1s1pa_315 Prostaglandin d2 11-ketoreductase (akr1c3) {Human 100.0
d1qwka_312 Hypothetical protein C07D8.6 {Nematode (Caenorhabd 100.0
d1afsa_319 3-alpha-hydroxysteroid dehydrogenase {Rat (Rattus 100.0
d1mzra_274 2,5-diketo-D-gluconic acid reductase A {Escherichi 100.0
d1mi3a_319 Xylose reductase {Fungi (Candida tenuis) [TaxId: 4 100.0
d1us0a_314 Aldose reductase (aldehyde reductase) {Human (Homo 100.0
d1hqta_324 Aldose reductase (aldehyde reductase) {Pig (Sus sc 100.0
d1vp5a_284 2,5-diketo-D-gluconic acid reductase A {Thermotoga 100.0
d1frba_315 FR-1 (fibroblast growth factor-induced) protein {M 100.0
d1sjda1242 N-acylamino acid racemase {Amycolatopsis sp. [TaxI 88.77
d2chra1244 Chlormuconate cycloisomerase {Alcaligenes eutrophu 86.99
d1r0ma1243 N-acylamino acid racemase {Deinococcus radiodurans 84.88
d1wufa1244 N-acylamino acid racemase {Listeria innocua [TaxId 83.15
d1jpma1234 L-Ala-D/L-Glu epimerase {Bacillus subtilis [TaxId: 81.77
>d1lqaa_ c.1.7.1 (A:) Tas protein {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: NAD(P)-linked oxidoreductase
family: Aldo-keto reductases (NADP)
domain: Tas protein
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=1.8e-49  Score=365.77  Aligned_cols=259  Identities=25%  Similarity=0.384  Sum_probs=211.1

Q ss_pred             cceeecC--CceeCcceeccCccCCCCcCCCCCCcHHHHHHHHHHHHHcCCCceeCCcCCCCCC---CCCchHHHHHHHH
Q 021767           39 WEKVKMG--PLSASPMGFGTWAWGNQFLWGYQESMDSQLQQTFNLAVENGINLFDTADSYGTGR---LNGKSEKLLGKFI  113 (308)
Q Consensus        39 m~~~~lg--g~~vs~lglG~~~~g~~~~~~~~~~~~~~~~~~l~~A~e~Gi~~~DtA~~Yg~~~---~~g~sE~~lG~~L  113 (308)
                      |+||+||  |++||+||||||+||+.       .+++++.++|+.|++.|||+||||+.||.++   ..|.+|..+|+++
T Consensus         1 M~yr~lG~tgl~vs~iglGt~~~g~~-------~~~~~a~~~l~~A~~~Gin~~DTA~~Yg~~~~~~~~G~~E~~~g~~~   73 (346)
T d1lqaa_           1 MQYHRIPHSSLEVSTLGLGTMTFGEQ-------NSEADAHAQLDYAVAQGINLIDVAEMYPVPPRPETQGLTETYVGNWL   73 (346)
T ss_dssp             CCEEECTTSSCEEESEEEECTTBTTT-------BCHHHHHHHHHHHHHTTCCEEECCTTCSSSCCTTTTTHHHHHHHHHH
T ss_pred             CCCeECCCCCCEecCeeEeCccCCCC-------CCHHHHHHHHHHHHHcCCCEEEcccccCCCcccccccchhhhhcchh
Confidence            8999999  99999999999998753       4678899999999999999999999999643   4699999999999


Q ss_pred             hhCCCCCCCCCCEEEEeccCCC---------CCCCChHHHHHHHHHHHHhhCCCcccEEEecCCCCCC------------
Q 021767          114 SEIPGQKQVQNNIVIATKFAAY---------PWRLTPGQFVNACRASLARLQIEQIGIGQLHWSTANY------------  172 (308)
Q Consensus       114 ~~~~~~~~~R~~v~i~tK~~~~---------~~~~~~~~i~~~~e~sL~~L~~d~iDl~~lH~~~~~~------------  172 (308)
                      +...   ..........+.+..         .+..+++.+++++++||+|||+||||+|++|||+...            
T Consensus        74 ~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~SL~rL~~d~iDl~~lH~~d~~~~~~~~~~~~~~~  150 (346)
T d1lqaa_          74 AKHG---SREKLIIASKVSGPSRNNDKGIRPDQALDRKNIREALHDSLKRLQTDYLDLYQVHWPQRPTNCFGKLGYSWTD  150 (346)
T ss_dssp             HHHC---CGGGCEEEEEECCSCCTTCCCSSTTCCSSHHHHHHHHHHHHHHHTSSCEEEEEECSCSSCCSCTTCCSCCCCS
T ss_pred             hhcc---ccceeeeeecccCCCccccccccccccccHHHHHHHHHHHHHHhCCCeeeeeehhccCccccccccccccccc
Confidence            8753   122233333332211         2345899999999999999999999999999986321            


Q ss_pred             --CChhHHHHHHHHHHHHHcCCccEEEeecCCHHHHHHHHHHHHHcCC-CceeeeeccCcccCCcchhhHHHHHHHhCCc
Q 021767          173 --APPQELALWNGLVAMYEKGLVRAVGVSNYGPNQLVKIHDYLTARGV-PLCSAQVQFSLLSMGENQLEIKNICDSLGIR  249 (308)
Q Consensus       173 --~~~~~~~~~~~l~~l~~~G~ir~iGvSn~~~~~l~~~~~~~~~~~~-~~~~~Q~~~~~~~~~~~~~~l~~~~~~~gi~  249 (308)
                        ......++|++|++|+++||||+||||||+.+++.++++.+...+. +++++|++||++++..+. +++++|+++||.
T Consensus       151 ~~~~~~~~~~~~~l~~l~~~G~ir~iGvS~~~~~~~~~~~~~~~~~~~~~~~~~q~~yn~~~~~~e~-~~~~~~~~~~i~  229 (346)
T d1lqaa_         151 SAPAVSLLDTLDALAEYQRAGKIRYIGVSNETAFGVMRYLHLADKHDLPRIVTIQNPYSLLNRSFEV-GLAEVSQYEGVE  229 (346)
T ss_dssp             SCCSSCHHHHHHHHHHHHHTTSEEEEEEESCCHHHHHHHHHHHHHHTCCCCCEEEEECBTTBCTHHH-HHHHHHHHHCCE
T ss_pred             ccccccHHHHHHHHHHHHhCCCeeEEEEeccCHHHHHHHHHHhhhcCCCCeEEEeCCCccccchHHH-HHHHHHHHhCCe
Confidence              1224567999999999999999999999999999999988776664 699999999999988665 999999999999


Q ss_pred             EEEcccccccccCCCCCCCCCCCCchhhhhh----ccccChHHHHHHHHHHHHHhCCCcccCC
Q 021767          250 LISYSPLGLGMLTGKYTPSKLPRGPRALLFR----QILPGLKPLLRSLKEIAERRGKTIPQLL  308 (308)
Q Consensus       250 v~a~spl~~G~L~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~l~~ia~~~g~s~aqva  308 (308)
                      +++|+||++|+|+++|.....|.........    .......++++.+.++|++||+|++|||
T Consensus       230 v~a~~pl~~G~Ltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~g~s~aq~a  292 (346)
T d1lqaa_         230 LLAYSCLGFGTLTGKYLNGAKPAGARNTLFSRFTRYSGEQTQKAVAAYVDIARRHGLDPAQMA  292 (346)
T ss_dssp             EEEECTTGGGGGGTTTGGGCCCTTCHHHHCTTCCTTCSHHHHHHHHHHHHHHHHTTCCHHHHH
T ss_pred             EEEecccccccccCCccCCCCCccccccccchhhhhhHHHHHHHHHHHHHHHHHHCcCHHHHH
Confidence            9999999999999999776554433222221    1334566788899999999999999975
>d1pyfa_ c.1.7.1 (A:) Putative oxidoreductase IolS {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1pz1a_ c.1.7.1 (A:) Putative oxidoreductase YhdN {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d3eaua1 c.1.7.1 (A:36-361) Voltage-dependent K+ channel beta subunit {Rat (Rattus norvegicus) [TaxId: 10116]} Back     information, alignment and structure
>d1ur3m_ c.1.7.1 (M:) Hypothetical oxidoreductase YdhF {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1hw6a_ c.1.7.1 (A:) 2,5-diketo-D-gluconic acid reductase A {Corynebacterium sp. [TaxId: 1720]} Back     information, alignment and structure
>d1s1pa_ c.1.7.1 (A:) Prostaglandin d2 11-ketoreductase (akr1c3) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1qwka_ c.1.7.1 (A:) Hypothetical protein C07D8.6 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Back     information, alignment and structure
>d1afsa_ c.1.7.1 (A:) 3-alpha-hydroxysteroid dehydrogenase {Rat (Rattus norvegicus) [TaxId: 10116]} Back     information, alignment and structure
>d1mzra_ c.1.7.1 (A:) 2,5-diketo-D-gluconic acid reductase A {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1mi3a_ c.1.7.1 (A:) Xylose reductase {Fungi (Candida tenuis) [TaxId: 45596]} Back     information, alignment and structure
>d1us0a_ c.1.7.1 (A:) Aldose reductase (aldehyde reductase) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1hqta_ c.1.7.1 (A:) Aldose reductase (aldehyde reductase) {Pig (Sus scrofa) [TaxId: 9823]} Back     information, alignment and structure
>d1vp5a_ c.1.7.1 (A:) 2,5-diketo-D-gluconic acid reductase A {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1frba_ c.1.7.1 (A:) FR-1 (fibroblast growth factor-induced) protein {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1sjda1 c.1.11.2 (A:126-367) N-acylamino acid racemase {Amycolatopsis sp. [TaxId: 37632]} Back     information, alignment and structure
>d2chra1 c.1.11.2 (A:127-370) Chlormuconate cycloisomerase {Alcaligenes eutrophus [TaxId: 106590]} Back     information, alignment and structure
>d1r0ma1 c.1.11.2 (A:133-375) N-acylamino acid racemase {Deinococcus radiodurans [TaxId: 1299]} Back     information, alignment and structure
>d1wufa1 c.1.11.2 (A:1127-1370) N-acylamino acid racemase {Listeria innocua [TaxId: 1642]} Back     information, alignment and structure
>d1jpma1 c.1.11.2 (A:126-359) L-Ala-D/L-Glu epimerase {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure