Citrus Sinensis ID: 021785

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------
Protein Sequence
MEMTKMSTTTTTSSDNKLQNHEEVMLPGFRFHPTDEELVGFYLRRKVEKKPISIEIIKQADIYKYDPWDLPKVSTVGDKEWYFFCIRGRKYRNSIRPNRVTGSGFWKATGIDKPIHSAKEPHECIGLKKSLVYYRGSAGKGTKTDWMMHEFRLPPNGKITNFSNTKDIAQEAEVWTLCRIFKRTPSYKKYTPNWKDSSTVAAANATKLHNPTDSSSKTCSSSLESETSCEQQQYMHQQKETKPFIINHVDQRNHPLTTQSQLSPYPASYYSSLWNLNGDDFFTNGNWDELRSVVELAVDPPHVYDCR
Secondary Structure (PSIPRED)
cccccccccccccccHHHcccccccccccccccccHHHHHHHHHHHHcccccccccEEEEEccccccccccccccccccEEEEcccccccccccccccccccccccccccccccccccccccEEEEEEEEEEEcccccccccccccEEEcccccccccccccccccccccccccEEEEEEEEccccccccccccccccHHHHccccccccccccccccccccccccccHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHccccccccccc
Secondary Structure Prediction (SSPRO)
cccEEEccccccccccccccccccccccccccccHHHHHHHHHHHHHcccccccEEEEEEEEcccccccccccccccccEEEEEcccccccccccccccccccccEEccccccccccccccccEEEEEEEEEEEcccccccccccEEEEEEEccccccccccccccccccccccEEEEEEEEccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHccccccccccc
Coil and Loop (DISEMBL)
memtkmstttttssdnklqnheevmlpgfrfhptdeELVGFYLRRKVEKKPISIeiikqadiykydpwdlpkvstvgdkeWYFFCIRgrkyrnsirpnrvtgsgfwkatgidkpihsakepheciglkKSLVYYRgsagkgtktdwmmhefrlppngkitnfsntkDIAQEAEVWTLCRifkrtpsykkytpnwkdssTVAAANatklhnptdsssktcssslesetsCEQQQYMHQqketkpfiinhvdqrnhplttqsqlspypasyysslwnlngddfftngnwDELRSVVElavdpphvydcr
Flexible Loop (DISEMBL)
memtkmstttttssdnklqNHEEVMLPGFRFHPTDEELVGFYLRrkvekkpisieiikqadiykydpwdlpkvstvgdkEWYFFCIRgrkyrnsirpnrvtgsgfWKATGIDKPIHSAKEPHECIGLKKSLVYYRGSAGKGTKTDWMMHEFRLPPNGKITNFSNTKDIAQEAEVWTLCRIfkrtpsykkytpnwkDSSTVAAANAtklhnptdssskTCSSSLESETSCEQQQYMHQQKETKPFIINHVDQRNHPLTTQSQLSPYPASYYSSLWNLNGDDFFTNGNWDELRSVVelavdpphvydcr
Low Complexity Region (SEG)
MEMTKMstttttssDNKLQNHEEVMLPGFRFHPTDEELVGFYLRRKVEKKPISIEIIKQADIYKYDPWDLPKVSTVGDKEWYFFCIRGRKYRNSIRPNRVTGSGFWKATGIDKPIHSAKEPHECIGLKKSLVYYRGSAGKGTKTDWMMHEFRLPPNGKITNFSNTKDIAQEAEVWTLCRIFKRTPSYKKYTPNWKDSSTVAAANATKLHNPTDsssktcssslesetsceqqqYMHQQKETKPFIINHVDQRNHPLTTqsqlspypasyysslWNLNGDDFFTNGNWDELRSVVELAVDPPHVYDCR
Disordered region (IsUnstruct)
************************MLPGFRFHPTDEELVGFYLRRKVEKKPISIEIIKQADIYKYDPWDLPKVSTVGDKEWYFFCIRGRKYRNSIRPNRVTGSGFWKATGIDKPIHSAKEPHECIGLKKSLVYYRGSAGKGTKTDWMMHEFRLPPNGKITNFSNTKDIAQEAEVWTLCRIFKRTPSYKKYTPNW*************************************************FIINHV**************PYPASYYSSLWNLNGDDFFTNGNWDELRSVVELAVDPPHV****
Disordered Region (DISOPRED)
***************************GFRFHPTDEELVGFYLRRKVEKKPISIEIIKQADIYKYDPWDLPKVSTVGDKEWYFFCIRGRKYRNSIRPNRVTGSGFWKATGIDKPIHSAKEPHECIGLKKSLVYYRGSAGKGTKTDWMMHEFRLPPN****************EVWTLCRIFKR***********************************************************************************************DDFFTNGNWDELRSVVELAVDPP*VYDC*
Disordered Region (DISEMBL)
****************KLQNHEEVMLPGFRFHPTDEELVGFYLRRKVEKKPISIEIIKQADIYKYDPWDLPKVSTVGDKEWYFFCIRGRKYRNSIRPNRVTGSGFWKATGIDKPIHSAKEPHECIGLKKSLVYYRGSAGKGTKTDWMMHEFRLPPNGKITNFSNTKDIAQEAEVWTLCRIFKRTPSYKKYTPNWKDSSTVAAANATK*******************************KETKPFIINHVDQRNHPLTTQSQLSPYPASYYSSLWNLNGDDFFTNGNWDELRSVVELAVDPPHVYDCR
Disordered Region (DISPRO)
***********************VMLPGFRFHPTDEELVGFYLRRKVEKKPISIEIIKQADIYKYDPWDLPKVSTVGDKEWYFFCIRGRKYRNSIRPNRVTGSGFWKATGIDKPIHSAKEPHECIGLKKSLVYYRGSAGKGTKTDWMMHEFRLPPN************AQEAEVWTLCRIFKRTP***********************************************************IINH*DQRNHPLTTQSQLSPYPASYYSSLWNLNGDDFFTNGNWDELRSVVELAVDPPHVY*CR
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
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TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MEMTKMSTTTTTSSDNKLQNHEEVMLPGFRFHPTDEELVGFYLRRKVEKKPISIEIIKQADIYKYDPWDLPKVSTVGDKEWYFFCIRGRKYRNSIRPNRVTGSGFWKATGIDKPIHSAKEPHECIGLKKSLVYYRGSAGKGTKTDWMMHEFRLPPNGKITNFSNTKDIAQEAEVWTLCRIFKRTPSYKKYTPNWKDSSTVAAANATKLHNPTDSSSKTCSSSLESETSCEQQQYMHQQKETKPFIINHVDQRNHPLTTQSQLSPYPASYYSSLWNLNGDDFFTNGNWDELRSVVELAVDPPHVYDCR
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	307	2.2.26 [Sep-21-2011]
Q9SK55	275	Transcription factor JUNG	yes	no	0.876	0.978	0.538	3e-77
Q9FIW5	337	Putative NAC domain-conta	no	no	0.543	0.495	0.586	9e-61
Q9ZVH0	418	Protein FEZ OS=Arabidopsi	no	no	0.537	0.394	0.642	9e-60
Q52QH4	318	NAC domain-containing pro	no	no	0.713	0.688	0.414	8e-47
Q8H4S4	425	NAC transcription factor	no	no	0.517	0.374	0.488	3e-45
Q9C598	283	Protein ATAF2 OS=Arabidop	no	no	0.644	0.699	0.449	2e-44
A2YMR0	425	NAC transcription factor	N/A	no	0.517	0.374	0.477	2e-44
Q8H115	312	NAC domain-containing pro	no	no	0.648	0.637	0.449	2e-44
A0SPJ6	396	NAC transcription factor	N/A	no	0.498	0.386	0.5	2e-44
A0SPJ9	402	NAC transcription factor	N/A	no	0.498	0.380	0.494	7e-44

>sp|Q9SK55|NAC42_ARATH Transcription factor JUNGBRUNNEN 1 OS=Arabidopsis thaliana GN=JUB1 PE=1 SV=1

 Score =  288 bits (737), Expect = 3e-77,   Method: Compositional matrix adjust.
 Identities = 162/301 (53%), Positives = 196/301 (65%), Gaps = 32/301 (10%)

Query: 6   MSTTTTTSSDNKLQNHEEVMLPGFRFHPTDEELVGFYLRRKVEKKPISIEIIKQADIYKY 65
           MS       D++ +N  E  LPGFRFHPTDEEL+G+YLRRKVE K I +E+IKQ DIYKY
Sbjct: 1   MSGEGNLGKDHEEEN--EAPLPGFRFHPTDEELLGYYLRRKVENKTIKLELIKQIDIYKY 58

Query: 66  DPWDLPKVSTVGDKEWYFFCIRGRKYRNSIRPNRVTGSGFWKATGIDKPIHSAKEPHECI 125
           DPWDLP+VS+VG+KEWYFFC+RGRKYRNS+RPNRVTGSGFWKATGIDKP++S     +C+
Sbjct: 59  DPWDLPRVSSVGEKEWYFFCMRGRKYRNSVRPNRVTGSGFWKATGIDKPVYSNL---DCV 115

Query: 126 GLKKSLVYYRGSAGKGTKTDWMMHEFRLPPNGKITNFSNTKDIAQEAEVWTLCRIFKRTP 185
           GLKKSLVYY GSAGKGTKTDWMMHEFRLP   K      T   AQ+AEVWTLCRIFKR  
Sbjct: 116 GLKKSLVYYLGSAGKGTKTDWMMHEFRLPSTTK------TDSPAQQAEVWTLCRIFKRVT 169

Query: 186 SYKKYTPNWKDSSTVAAANATKLHNPTDSSSKTCSSSLESE-TSCEQQQYMHQQ----KE 240
           S +        + T+   N   +   TD+ SKT  SSL+S+ TS      M  +    + 
Sbjct: 170 SQR--------NPTILPPNRKPVITLTDTCSKT--SSLDSDHTSHRTVDSMSHEPPLPQP 219

Query: 241 TKPFIINHVDQRNHPLTTQSQLSPYPASYYSSLWNLNGDDFFTN-GNWDELRSVVELAVD 299
             P+   H+   N P  T +       +   S WN NG DF  +  +WDELRSV++    
Sbjct: 220 QNPYWNQHIVGFNQPTYTGND-----NNLLMSFWNGNGGDFIGDSASWDELRSVIDGNTK 274

Query: 300 P 300
           P
Sbjct: 275 P 275

Arabidopsis thaliana (taxid: 3702)

>sp|Q9FIW5|NAC94_ARATH Putative NAC domain-containing protein 94 OS=Arabidopsis thaliana GN=ANAC094 PE=4 SV=1

 Score =  234 bits (596), Expect = 9e-61,   Method: Compositional matrix adjust.
 Identities = 108/184 (58%), Positives = 136/184 (73%), Gaps = 17/184 (9%)

Query: 16  NKLQNHEEVMLPGFRFHPTDEELVGFYLRRKVEKKPISIEIIKQADIYKYDPWDLPKVST 75
           N ++ +++V+LPGFRFHPTDEELV FYL+RKV  K +  ++IK+ DIYKYDPWDLPK++ 
Sbjct: 11  NNVERYDDVVLPGFRFHPTDEELVSFYLKRKVLHKSLPFDLIKKVDIYKYDPWDLPKLAA 70

Query: 76  VGDKEWYFFCIRGRKYRNSIRPNRVTGSGFWKATGIDKPIHSAKEPHECIGLKKSLVYYR 135
           +G+KEWYF+C R RKYRNS RPNRVTG GFWKATG D+PI+S  +   CIGLKKSLV+YR
Sbjct: 71  MGEKEWYFYCPRDRKYRNSTRPNRVTGGGFWKATGTDRPIYSL-DSTRCIGLKKSLVFYR 129

Query: 136 GSAGKGTKTDWMMHEFRLP----------PN-----GKITNFSNTKDIAQEAEVWTLCRI 180
           G A KG KTDWMMHEFRLP          PN       + N +N+K++    + W +CRI
Sbjct: 130 GRAAKGVKTDWMMHEFRLPSLSDSHHSSYPNYNNKKQHLNNNNNSKELPSN-DAWAICRI 188

Query: 181 FKRT 184
           FK+T
Sbjct: 189 FKKT 192

Arabidopsis thaliana (taxid: 3702)

>sp|Q9ZVH0|FEZ_ARATH Protein FEZ OS=Arabidopsis thaliana GN=FEZ PE=2 SV=1

 Score =  230 bits (587), Expect = 9e-60,   Method: Compositional matrix adjust.
 Identities = 108/168 (64%), Positives = 131/168 (77%), Gaps = 3/168 (1%)

Query: 19  QNHEEVMLPGFRFHPTDEELVGFYLRRKVEKKPISIEIIKQADIYKYDPWDLPKVSTVGD 78
           Q  E+V+LPGFRFHPTDEELV FYL+RKV+  P+SIE+I+Q DIYKYDPWDLPK +  G+
Sbjct: 10  QKMEDVLLPGFRFHPTDEELVSFYLKRKVQHNPLSIELIRQLDIYKYDPWDLPKFAMTGE 69

Query: 79  KEWYFFCIRGRKYRNSIRPNRVTGSGFWKATGIDKPIHSAKEPHECIGLKKSLVYYRGSA 138
           KEWYF+C R RKYRNS RPNRVTG+GFWKATG D+PI+S+ E ++CIGLKKSLV+Y+G A
Sbjct: 70  KEWYFYCPRDRKYRNSSRPNRVTGAGFWKATGTDRPIYSS-EGNKCIGLKKSLVFYKGRA 128

Query: 139 GKGTKTDWMMHEFRLPPNGKITNFSNT--KDIAQEAEVWTLCRIFKRT 184
            KG KTDWMMHEFRLP   + +  S           + W +CRIFK+T
Sbjct: 129 AKGVKTDWMMHEFRLPSLSEPSPPSKRFFDSPVSPNDSWAICRIFKKT 176

Promotes periclinal root capforming cell divisions. Activates expression of its negative regulator SMB in a feedback loop for controlled switches in cell division plane.

Arabidopsis thaliana (taxid: 3702)

>sp|Q52QH4|NAC68_ORYSJ NAC domain-containing protein 68 OS=Oryza sativa subsp. japonica GN=NAC68 PE=2 SV=1

 Score =  187 bits (475), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 95/229 (41%), Positives = 133/229 (58%), Gaps = 10/229 (4%)

Query: 6   MSTTTTTSSDNKLQNHEEVMLP-GFRFHPTDEELVGFYLRRKVEKKPISIEIIKQADIYK 64
           M          +     E+ LP GFRFHPTDEELV  YL RKV ++P+ + II + D+YK
Sbjct: 1   MEMAAAVGGSGRRDAEAELNLPPGFRFHPTDEELVVHYLCRKVARQPLPVPIIAEVDLYK 60

Query: 65  YDPWDLPKVSTVGDKEWYFFCIRGRKYRNSIRPNRVTGSGFWKATGIDKPIHSAKEPHEC 124
            DPWDLP+ +  G KEWYFF  R RKY N  RPNR  G G+WKATG DKP+ + K     
Sbjct: 61  LDPWDLPEKALFGRKEWYFFTPRDRKYPNGSRPNRAAGRGYWKATGADKPV-APKGSART 119

Query: 125 IGLKKSLVYYRGSAGKGTKTDWMMHEFRLPPNGKITNFSNTKDIAQEAEVWTLCRIFKRT 184
           +G+KK+LV+Y G A +G KTDW+MHE+RL            K  +Q+ + W LCR++ + 
Sbjct: 120 VGIKKALVFYSGKAPRGVKTDWIMHEYRL---ADADRAPGGKKGSQKLDEWVLCRLYNKK 176

Query: 185 PSYKKYTPNWKDSSTVAAANATKLHNPTD-----SSSKTCSSSLESETS 228
            +++K     +D ++VAAA     H+        +++ T S S ++  S
Sbjct: 177 NNWEKVKLEQQDVASVAAAAPRNHHHQNGEVMDAAAADTMSDSFQTHDS 225

Oryza sativa subsp. japonica (taxid: 39947)

>sp|Q8H4S4|NAC10_ORYSJ NAC transcription factor ONAC010 OS=Oryza sativa subsp. japonica GN=ONAC010 PE=2 SV=1

 Score =  182 bits (462), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 85/174 (48%), Positives = 111/174 (63%), Gaps = 15/174 (8%)

Query: 25  MLPGFRFHPTDEELVGFYLRRKVEKKPISIEIIKQADIYKYDPWDLPKVSTVGDKEWYFF 84
           + PGFRFHPTDEELV  YL++K    P+ + II + D+YK+DPWDLP+ +  G++EWYFF
Sbjct: 29  LPPGFRFHPTDEELVVHYLKKKAASVPLPVTIIAEVDLYKFDPWDLPEKANFGEQEWYFF 88

Query: 85  CIRGRKYRNSIRPNRVTGSGFWKATGIDKPIHSAKEPHECIGLKKSLVYYRGSAGKGTKT 144
             R RKY N  RPNR   SG+WKATG DKPI S+    E +G+KK+LV+YRG   KG KT
Sbjct: 89  SPRDRKYPNGARPNRAATSGYWKATGTDKPIMSSGSTREKVGVKKALVFYRGKPPKGVKT 148

Query: 145 DWMMHEFRLP--------------PNGKITNFSNTKDIAQEAEVWTLCRIFKRT 184
           +W+MHE+RL               P   IT  S    ++   + W LCRI+K+T
Sbjct: 149 NWIMHEYRLTDTSSSAAAVATTRRPPPPITGGSKGA-VSLRLDDWVLCRIYKKT 201

Transcription factor of the NAC family associated with male fertility. Involved in anther development, but not in senescence. Reduced expression of NAC5 via RNAi leads to male-sterility.

Oryza sativa subsp. japonica (taxid: 39947)

>sp|Q9C598|NAC81_ARATH Protein ATAF2 OS=Arabidopsis thaliana GN=NAC081 PE=1 SV=1

 Score =  179 bits (455), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 93/207 (44%), Positives = 129/207 (62%), Gaps = 9/207 (4%)

Query: 23  EVMLP-GFRFHPTDEELVGFYLRRKVEKKPISIEIIKQADIYKYDPWDLPKVSTVGDKEW 81
           E+ LP GFRFHPTDEELV FYL RK   + IS  +I + D+YK++PW+LP++S  G+KEW
Sbjct: 4   ELNLPAGFRFHPTDEELVKFYLCRKCASEQISAPVIAEIDLYKFNPWELPEMSLYGEKEW 63

Query: 82  YFFCIRGRKYRNSIRPNRVTGSGFWKATGIDKPIHSAKEPHECIGLKKSLVYYRGSAGKG 141
           YFF  R RKY N  RPNR  G+G+WKATG DKPI   K     +G+KK+LV+Y G A KG
Sbjct: 64  YFFSPRDRKYPNGSRPNRAAGTGYWKATGADKPIGKPK----TLGIKKALVFYAGKAPKG 119

Query: 142 TKTDWMMHEFRLPPNGKITNFSNTKDIAQEAEVWTLCRIFKRTPSYKKYTPNWKDSSTVA 201
            KT+W+MHE+RL    +  + +   ++    + W LCRI+ +  + +KY P   D     
Sbjct: 120 IKTNWIMHEYRLANVDRSASVNKKNNL--RLDDWVLCRIYNKKGTMEKYFP--ADEKPRT 175

Query: 202 AANATKLHNPTDSSSKTCSSSLESETS 228
              A +  +P D+S  T  +  E ++S
Sbjct: 176 TTMAEQSSSPFDTSDSTYPTLQEDDSS 202

Arabidopsis thaliana (taxid: 3702)

>sp|A2YMR0|NAC10_ORYSI NAC transcription factor ONAC010 OS=Oryza sativa subsp. indica GN=ONAC010 PE=3 SV=1

 Score =  179 bits (455), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 83/174 (47%), Positives = 111/174 (63%), Gaps = 15/174 (8%)

Query: 25  MLPGFRFHPTDEELVGFYLRRKVEKKPISIEIIKQADIYKYDPWDLPKVSTVGDKEWYFF 84
           + PGFRFHPTDEELV  YL++K    P+ + II + D+YK+DPW+LP+ +  G++EWYFF
Sbjct: 29  LPPGFRFHPTDEELVVHYLKKKAASVPLPVTIIAEVDLYKFDPWELPEKANFGEQEWYFF 88

Query: 85  CIRGRKYRNSIRPNRVTGSGFWKATGIDKPIHSAKEPHECIGLKKSLVYYRGSAGKGTKT 144
             R RKY N  RPNR   SG+WKATG DKPI ++    E +G+KK+LV+YRG   KG KT
Sbjct: 89  SPRDRKYPNGARPNRAATSGYWKATGTDKPIMASGSTREKVGVKKALVFYRGKPPKGVKT 148

Query: 145 DWMMHEFRLP--------------PNGKITNFSNTKDIAQEAEVWTLCRIFKRT 184
           +W+MHE+RL               P   IT  S    ++   + W LCRI+K+T
Sbjct: 149 NWIMHEYRLTDTSSSAAAVATTRQPPPPITGGSRGA-VSLRLDDWVLCRIYKKT 201

Transcription factor of the NAC family associated with male fertility.

Oryza sativa subsp. indica (taxid: 39946)

>sp|Q8H115|NA102_ARATH NAC domain-containing protein 102 OS=Arabidopsis thaliana GN=NAC102 PE=1 SV=1

 Score =  179 bits (454), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 93/207 (44%), Positives = 134/207 (64%), Gaps = 8/207 (3%)

Query: 23  EVMLP-GFRFHPTDEELVGFYLRRKVEKKPISIEIIKQADIYKYDPWDLPKVSTVGDKEW 81
           E+ LP GFRFHPTDEELV FYL R+   +PI++ +I + D+YK++PW+LP+++  G+KEW
Sbjct: 47  ELNLPAGFRFHPTDEELVKFYLCRRCASEPINVPVIAEIDLYKFNPWELPEMALYGEKEW 106

Query: 82  YFFCIRGRKYRNSIRPNRVTGSGFWKATGIDKPIHSAKEPHECIGLKKSLVYYRGSAGKG 141
           YFF  R RKY N  RPNR  G+G+WKATG DKPI   K     +G+KK+LV+Y G A KG
Sbjct: 107 YFFSHRDRKYPNGSRPNRAAGTGYWKATGADKPIGKPK----TLGIKKALVFYAGKAPKG 162

Query: 142 TKTDWMMHEFRLPPNGKITNFSNTKDIAQEAEVWTLCRIFKRTPSYKKYTPNWKDSSTVA 201
            KT+W+MHE+RL  N   +  +N K+  +  + W LCRI+ +  + +KY P   +  T  
Sbjct: 163 IKTNWIMHEYRL-ANVDRSASTNKKNNLR-LDDWVLCRIYNKKGTMEKYLPAAAEKPTEK 220

Query: 202 AANA-TKLHNPTDSSSKTCSSSLESET 227
            + + ++  +   S   TCS + E E+
Sbjct: 221 MSTSDSRCSSHVISPDVTCSDNWEVES 247

May be involved in regulation of seed germination under flooding.

Arabidopsis thaliana (taxid: 3702)

>sp|A0SPJ6|NAMB2_TRIDB NAC transcription factor NAM-B2 OS=Triticum durum GN=NAM-B2 PE=2 SV=1

 Score =  179 bits (454), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 84/168 (50%), Positives = 112/168 (66%), Gaps = 15/168 (8%)

Query: 27  PGFRFHPTDEELVGFYLRRKVEKKPISIEIIKQADIYKYDPWDLPKVSTVGDKEWYFFCI 86
           PGFRFHPTDEELV  YL++K  K P+ + II + D+YK+DPW+LP+ +T G++EWYFF  
Sbjct: 30  PGFRFHPTDEELVVHYLKKKAAKVPLPVTIITEVDLYKFDPWELPEKATFGEQEWYFFSP 89

Query: 87  RGRKYRNSIRPNRVTGSGFWKATGIDKPIHSAKEPHECIGLKKSLVYYRGSAGKGTKTDW 146
           R RKY N  RPNR   SG+WKATG DKPI ++    E +G+KK+LV+YRG   KG KT+W
Sbjct: 90  RDRKYPNGARPNRAATSGYWKATGTDKPILASGCGREKVGVKKALVFYRGKPPKGLKTNW 149

Query: 147 MMHEFRL-----------PPNGKITNFSNTKDIAQEAEVWTLCRIFKR 183
           +MHE+RL           PP   +T  S +  +    + W LCRI+K+
Sbjct: 150 IMHEYRLTDASSSATTSRPP--PVTGGSRSASL--RLDDWVLCRIYKK 193

Transcription factor of the NAC family associated with the grain protein content (GPC). Accelerates senescence and increases nutrient remobilization from leaves to developing grains. The tetraploid cultivated wheat (T.durum) contains one additional gene encoding for a functional protein (NAM-A1) and one extra pseudogene (NAM-B1) (PubMed:17124321). Plays a weaker role in terminal senescence than NAM-A1.

Triticum durum (taxid: 4567)

>sp|A0SPJ9|NAM2_HORVD NAC transcription factor NAM-2 OS=Hordeum vulgare var. distichum GN=NAM-2 PE=4 SV=1

 Score =  177 bits (450), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 83/168 (49%), Positives = 110/168 (65%), Gaps = 15/168 (8%)

Query: 27  PGFRFHPTDEELVGFYLRRKVEKKPISIEIIKQADIYKYDPWDLPKVSTVGDKEWYFFCI 86
           PGFRFHPTDEELV  YL++K  K P+ + II + D+YK+DPW+LP+ +T G++EWYFF  
Sbjct: 30  PGFRFHPTDEELVVHYLKKKAAKVPLPVTIIAEVDLYKFDPWELPEKATFGEQEWYFFSP 89

Query: 87  RGRKYRNSIRPNRVTGSGFWKATGIDKPIHSAKEPHECIGLKKSLVYYRGSAGKGTKTDW 146
           R RKY N  RPNR   SG+WKATG DKPI ++    E +G+K +LV+YRG   KG KT+W
Sbjct: 90  RDRKYPNGARPNRAATSGYWKATGTDKPILASGCGREKVGVKXALVFYRGKPPKGLKTNW 149

Query: 147 MMHEFRL-----------PPNGKITNFSNTKDIAQEAEVWTLCRIFKR 183
           +MHE+RL           PP   +T  S    +    + W LCRI+K+
Sbjct: 150 IMHEYRLTDASSSAATSRPP--PVTGGSRAASL--RLDDWVLCRIYKK 193

Transcription factor of the NAC family associated with the grain protein content (GPC). Accelerates senescence and increases nutrient remobilization from leaves to developing grains. Sequences of 11 European varieties of H.vulgare tested belongs to the same haplotype while the sequence found in H.spontaneum, an ancestor of the cultivated H.vulgare which has a higher GPC, belongs to an other haplotype.

Hordeum vulgare var. distichum (taxid: 112509)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	307
225446795	298	PREDICTED: NAC domain-containing protein	0.951	0.979	0.668	1e-112
224062643	293	NAC domain protein, IPR003441 [Populus t	0.908	0.952	0.682	1e-105
224085391	305	NAC domain protein, IPR003441 [Populus t	0.947	0.954	0.650	1e-104
357494187	311	NAC domain protein IPR003441 [Medicago t	0.902	0.890	0.650	1e-101
356499340	320	PREDICTED: NAC domain-containing protein	0.905	0.868	0.671	1e-101
356567447	304	PREDICTED: NAC domain-containing protein	0.921	0.930	0.621	5e-99
363806732	325	uncharacterized protein LOC100795553 [Gl	0.885	0.836	0.663	5e-98
363814338	304	uncharacterized protein LOC100810472 [Gl	0.925	0.934	0.614	9e-97
296082752	284	unnamed protein product [Vitis vinifera]	0.895	0.968	0.579	3e-88
359494561	279	PREDICTED: NAC domain-containing protein	0.876	0.964	0.584	9e-88

>gi|225446795|ref|XP_002283251.1| PREDICTED: NAC domain-containing protein 42 [Vitis vinifera] gi|302143522|emb|CBI22083.3| unnamed protein product [Vitis vinifera]

 Score =  409 bits (1051), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 206/308 (66%), Positives = 240/308 (77%), Gaps = 16/308 (5%)

Query: 6   MSTTTTTSSDNKLQNHEEVMLPGFRFHPTDEELVGFYLRRKVEKKPISIEIIKQADIYKY 65
           M    T++ DNK  + EEV+LPGFRFHPTDEELVGFYLRRKVEKKPIS+E+IKQ DIYKY
Sbjct: 1   MEVEKTSTLDNKKDDDEEVVLPGFRFHPTDEELVGFYLRRKVEKKPISLELIKQVDIYKY 60

Query: 66  DPWDLPKVST-VGDKEWYFFCIRGRKYRNSIRPNRVTGSGFWKATGIDKPIHSAKEPHEC 124
           DPWDLP+VST +GD+EWYFFCIRGRKYRNSIRPNRVTGSGFWKATGIDKPI+S +  +EC
Sbjct: 61  DPWDLPRVSTNMGDREWYFFCIRGRKYRNSIRPNRVTGSGFWKATGIDKPIYSVEATNEC 120

Query: 125 IGLKKSLVYYRGSAGKGTKTDWMMHEFRLPPNGKITNFSNTKDIAQEAEVWTLCRIFKRT 184
           IGLKKSLVYYRGSAGKGTKTDWMMHEFRLPP GK T F N K++ QEAEVWTLCRIFKR+
Sbjct: 121 IGLKKSLVYYRGSAGKGTKTDWMMHEFRLPPGGKGTYFPNAKNVTQEAEVWTLCRIFKRS 180

Query: 185 PSYKKYTPNWKDSSTVAAANATKLHNPTDSSSKTCSSSLESETSCEQQQYMHQQKETK-- 242
           P+Y+KYTP  K S        +     TDSSSKTC  SLES+ + +   + +    TK  
Sbjct: 181 PTYRKYTPEGKGS-------ISNKQVATDSSSKTC--SLESDNNDKYLSFENSTTRTKNS 231

Query: 243 PFIINHVDQRNHPLTTQ--SQLSPYPASYYSSLWNLNGDD-FFTNGNWDELRSVVELAVD 299
             + + +D+R+  +  Q  S +SPY    YSS WN NG+D FFT+GNWDELRS+VE A+D
Sbjct: 232 TVVDSSIDERSQLVVGQMSSFVSPYSGP-YSSFWNPNGNDQFFTSGNWDELRSIVESAID 290

Query: 300 PPHVYDCR 307
           PPHVYDCR
Sbjct: 291 PPHVYDCR 298

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224062643|ref|XP_002300866.1| NAC domain protein, IPR003441 [Populus trichocarpa] gi|222842592|gb|EEE80139.1| NAC domain protein, IPR003441 [Populus trichocarpa]

 Score =  387 bits (994), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 211/309 (68%), Positives = 229/309 (74%), Gaps = 30/309 (9%)

Query: 12  TSSDNKLQNHEEVMLPGFRFHPTDEELVGFYLRRKVEKKPISIEIIKQADIYKYDPWDLP 71
           +SSD      EEVMLPGFRFHPTDEELVGFYLRRKVEKKP+  E+IKQ DIYKYDPWDLP
Sbjct: 2   SSSDIDHNEDEEVMLPGFRFHPTDEELVGFYLRRKVEKKPLRFELIKQIDIYKYDPWDLP 61

Query: 72  KVSTVGDKEWYFFCIRGRKYRNSIRPNRVTGSGFWKATGIDKPIHSAKEPHECIGLKKSL 131
           KVS  GD+EWYFFCIRGRKYRNSIRPNRVTGSGFWKATGIDKPI+S KEPHECIGLKKSL
Sbjct: 62  KVSNAGDREWYFFCIRGRKYRNSIRPNRVTGSGFWKATGIDKPIYSVKEPHECIGLKKSL 121

Query: 132 VYYRGSAGKGTKTDWMMHEFRLPPNGKITNFSNTKDIAQEAEVWTLCRIFKRTPSYKKYT 191
           VYYRGSAGKGTKTDWMMHEFRLPPNGK T   N K+IAQEAEVWTLCRI KR PS+KKY 
Sbjct: 122 VYYRGSAGKGTKTDWMMHEFRLPPNGKTT---NPKNIAQEAEVWTLCRILKRVPSHKKYA 178

Query: 192 PNWKDSSTVAAANATKLHNPTDSSSKTCSSSLESETSCEQQ----QYMHQQKETKPFII- 246
                      A A K H   DS+SKTC  S ESE S EQ         Q+ E KP II 
Sbjct: 179 -----------AAAAKQHPIIDSNSKTC--SFESEISAEQNVSFGDSFGQRNERKPVIID 225

Query: 247 NHVD-QRNHPLTTQSQLS----PYPASYYSSLWNLN-GDDFFTNGNWDELRSVVEL-AVD 299
           N V+ +RNH  T     S    P+ A+ + + WN + GDDFF NGNWDELR+VVEL A+D
Sbjct: 226 NQVNHERNHFFTGGQYDSITEAPFTAA-FQNFWNPDVGDDFFDNGNWDELRTVVELGAID 284

Query: 300 PPHVYD-CR 307
           P   YD CR
Sbjct: 285 PAQAYDYCR 293

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224085391|ref|XP_002307563.1| NAC domain protein, IPR003441 [Populus trichocarpa] gi|222857012|gb|EEE94559.1| NAC domain protein, IPR003441 [Populus trichocarpa]

 Score =  382 bits (982), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 205/315 (65%), Positives = 225/315 (71%), Gaps = 24/315 (7%)

Query: 3   MTKMSTTTTTSSDNKLQNHEEVMLPGFRFHPTDEELVGFYLRRKVEKKPISIEIIKQADI 62
           MTKMS     SSDN     EEV+LPGFRFHPTDEELVGFYLRRKVEKK I IE+IKQ DI
Sbjct: 4   MTKMSGCI--SSDN-YDKDEEVILPGFRFHPTDEELVGFYLRRKVEKKRIGIELIKQIDI 60

Query: 63  YKYDPWDLPKVSTVGDKEWYFFCIRGRKYRNSIRPNRVTGSGFWKATGIDKPIHSAKEPH 122
           YKYDPWDLP +ST  DKEWYFFC+RGRKYRNS+RPNRVT SGFWKATGIDKPI+S KE H
Sbjct: 61  YKYDPWDLP-ISTAEDKEWYFFCLRGRKYRNSVRPNRVTRSGFWKATGIDKPIYSDKETH 119

Query: 123 ECIGLKKSLVYYRGSAGKGTKTDWMMHEFRLPPNGKITNFSNTKDIAQEAEVWTLCRIFK 182
           ECIGLKK LVYYRGSAGKGTKTDWMMHEFRLPPNGK TN  N ++IAQEAEVWTLCRI K
Sbjct: 120 ECIGLKKCLVYYRGSAGKGTKTDWMMHEFRLPPNGKTTNPLNARNIAQEAEVWTLCRILK 179

Query: 183 RTPSYKKYTPNWKDSSTVAAANATKLHNPTDSSSKTCSSSLESETSCEQQ----QYMHQQ 238
           R PSYKKY         VAA  AT+   P +  S + S S ESETS EQ         Q+
Sbjct: 180 RIPSYKKY---------VAAVPATE-QKPINCDSNSKSCSFESETSTEQDVSFGDSFVQR 229

Query: 239 KETKPFIINHVDQRNHPLTTQSQL-----SPYPASYYSSLWNLNGDDFFTNGNWDELRSV 293
            E KP  I+ VD   + L    Q      +P+ A+Y        GDDFF NGNWD+LR+V
Sbjct: 230 NERKPVTIDQVDHERNNLFMGGQYDSVTEAPFTAAYQGFRNTGIGDDFFVNGNWDDLRTV 289

Query: 294 VELAVDPPHVYD-CR 307
           VELA+DP  V D CR
Sbjct: 290 VELAIDPAQVPDECR 304

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357494187|ref|XP_003617382.1| NAC domain protein IPR003441 [Medicago truncatula] gi|355518717|gb|AET00341.1| NAC domain protein IPR003441 [Medicago truncatula]

 Score =  375 bits (963), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 197/303 (65%), Positives = 221/303 (72%), Gaps = 26/303 (8%)

Query: 22  EEVMLPGFRFHPTDEELVGFYLRRKVEKKPISIEIIKQADIYKYDPWDLPKVSTVGDKEW 81
           +EV+LPGFRFHPTD+ELVGFYLRRKVEKKP+ IE+IK+ DIYKYDPWDLPK STVG+KE 
Sbjct: 15  DEVVLPGFRFHPTDDELVGFYLRRKVEKKPLRIELIKEIDIYKYDPWDLPKASTVGEKEC 74

Query: 82  YFFCIRGRKYRNSIRPNRVTGSGFWKATGIDKPIHSAKEPHECIGLKKSLVYYRGSAGKG 141
           YFFC+RGRKYRNSIRPNRVTGSGFWKATGIDKPI+  KE HECIGLKKSLVYYRGSAGKG
Sbjct: 75  YFFCLRGRKYRNSIRPNRVTGSGFWKATGIDKPIYCVKESHECIGLKKSLVYYRGSAGKG 134

Query: 142 TKTDWMMHEFRLPPNGKITN---FSNTKDIAQEAEVWTLCRIFKRTPSYKKYTPNWKDSS 198
           TKTDWMMHEFRLPP GK +N    ++T D+ QEAEVWTLCRIFKR PSYKKYTPN K  S
Sbjct: 135 TKTDWMMHEFRLPPKGKTSNNQVLNHTNDV-QEAEVWTLCRIFKRIPSYKKYTPNVKKDS 193

Query: 199 TVAAANATKLHNPTDSSSKTCSSSLESETSCEQ-------QQYMHQQKETKPFIINH-VD 250
             AA           SSSKTC  SL+S+ +  Q       Q  + Q  ETKPFI  H VD
Sbjct: 194 EAAAFTINS------SSSKTC--SLDSDNTKPQYLTFTNSQHVVQQNHETKPFINGHVVD 245

Query: 251 QR-NHPLTTQ---SQLSPYPASYYSSLWNLNG--DDFFTNGNWDELRSVVELAVDPPHVY 304
           QR N+    Q   +   P     +SS WN     DD F N NWD+LRS+V+   DP  VY
Sbjct: 246 QRFNNSFLNQLGNAAQVPTTTLSHSSFWNDQNVLDDAFANENWDDLRSIVQFTFDPSKVY 305

Query: 305 DCR 307
           DC+
Sbjct: 306 DCK 308

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356499340|ref|XP_003518499.1| PREDICTED: NAC domain-containing protein 42-like [Glycine max]

 Score =  373 bits (957), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 198/295 (67%), Positives = 221/295 (74%), Gaps = 17/295 (5%)

Query: 25  MLPGFRFHPTDEELVGFYLRRKVEKKPISIEIIKQADIYKYDPWDLPKVSTVGDKEWYFF 84
           +LPGFRFHPTDEELVGFYLRRKVE KP+ IE+IKQ DIYKYDPWDLPKVS+VG+KEWYFF
Sbjct: 21  VLPGFRFHPTDEELVGFYLRRKVENKPLRIELIKQIDIYKYDPWDLPKVSSVGEKEWYFF 80

Query: 85  CIRGRKYRNSIRPNRVTGSGFWKATGIDKPIHSAKEPHECIGLKKSLVYYRGSAGKGTKT 144
           CIRGRKYRNSIRPNRVTGSGFWKATGIDKPI+  KEPHECIGLKKSLVYYRGSAGKGTKT
Sbjct: 81  CIRGRKYRNSIRPNRVTGSGFWKATGIDKPIYCVKEPHECIGLKKSLVYYRGSAGKGTKT 140

Query: 145 DWMMHEFRLPPNGKITNFSNTKDIAQEAEVWTLCRIFKRTPSYKKYTPNWKDSSTVAAAN 204
           DWMMHEFRLPPNGK +N     D AQEAEVWTLCRI KR PSYKKYTPN KDS+  AA  
Sbjct: 141 DWMMHEFRLPPNGKTSNNPQAND-AQEAEVWTLCRILKRFPSYKKYTPNLKDSA--AAPI 197

Query: 205 ATKLHNPTDSSSKTCSSSLESETSCEQQQY-------MHQQKETKPFIINHVD-QRNHPL 256
            TK + PT+SSS + + SLES+       +       + QQ E KP I  HVD +RNH  
Sbjct: 198 MTKPNYPTNSSSTSKTCSLESDNGKPYLTFTNSLSPLLIQQNERKPAINGHVDVERNHLF 257

Query: 257 TTQ--SQLSPYPASY-YSSLWNLNGDDF--FTNGNWDELRSVVELA-VDPPHVYD 305
             Q    ++  P S  YSS WN +  +   F N NWD+L SVV+ A +DP  V D
Sbjct: 258 LGQLGINVAQAPTSLSYSSFWNRHHQNNVEFANENWDDLTSVVQFANIDPSRVSD 312

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356567447|ref|XP_003551931.1| PREDICTED: NAC domain-containing protein 42-like [Glycine max]

 Score =  367 bits (941), Expect = 5e-99,   Method: Compositional matrix adjust.
 Identities = 194/312 (62%), Positives = 226/312 (72%), Gaps = 29/312 (9%)

Query: 6   MSTTTTTSSDNKLQNHEEVMLPGFRFHPTDEELVGFYLRRKVEKKPISIEIIKQADIYKY 65
           M+    +S D K    EEV+LPGFRFHPTDEELVGFYL+RKV+KKP+ IE+IKQ DIYKY
Sbjct: 1   MNVKVHSSDDTK--KDEEVVLPGFRFHPTDEELVGFYLQRKVDKKPLKIELIKQVDIYKY 58

Query: 66  DPWDLPKVSTVGDKEWYFFCIRGRKYRNSIRPNRVTGSGFWKATGIDKPIHSAKEPHECI 125
           DPWDLPKV++ GDKEWYFFCIRGRKYRNS+RPNRVT SGFWKATGIDK I+  KEPHECI
Sbjct: 59  DPWDLPKVNSFGDKEWYFFCIRGRKYRNSVRPNRVTRSGFWKATGIDKSIYCVKEPHECI 118

Query: 126 GLKKSLVYYRGSAGKGTKTDWMMHEFRLPPNGKITNFSNTKDIAQEAEVWTLCRIFKRTP 185
           GLKKSLVYYRGSAGKGTKTDWMMHEFRLPPN K    S+  D+ QEAEVWTLCRIFKR P
Sbjct: 119 GLKKSLVYYRGSAGKGTKTDWMMHEFRLPPNAK----SSPNDV-QEAEVWTLCRIFKRIP 173

Query: 186 SYKKYTPNWKDSSTVAAANATKLHNPTDSSSKTCSSSLESETSCE-----QQQYMHQQKE 240
           S+KKY PN KDS+      ATK  NP +S+    +S+L+S+  C+     +   M QQ E
Sbjct: 174 SFKKYAPNLKDSTP-----ATK-PNPVNSN----ASTLDSDNCCKPYLICRDPMMMQQIE 223

Query: 241 TKPFIINHVDQRNHPLTTQ----SQLSPYPASYYSSLWNLNG--DDFFTNGNWDELRSVV 294
            KP +I  VD++ H    Q    S L     + Y + WN N   D  F N NWD+LRSVV
Sbjct: 224 RKP-VIGQVDEKKHLFLGQFGPLSHLQAPSTTPYPNFWNQNNVEDHAFANENWDDLRSVV 282

Query: 295 ELAVDPPHVYDC 306
           + A+DP  V+DC
Sbjct: 283 QFAIDPSTVFDC 294

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|363806732|ref|NP_001242528.1| uncharacterized protein LOC100795553 [Glycine max] gi|255638953|gb|ACU19778.1| unknown [Glycine max]

 Score =  363 bits (932), Expect = 5e-98,   Method: Compositional matrix adjust.
 Identities = 195/294 (66%), Positives = 220/294 (74%), Gaps = 22/294 (7%)

Query: 24  VMLPGFRFHPTDEELVGFYLRRKVEKKPISIEIIKQADIYKYDPWDLPKVSTVGDKEWYF 83
           V+LPGFRFHPTDEELVGFYLRRKVEKKP+ IE+IKQ DIYKYDPWDLP +S+VG+KEWYF
Sbjct: 34  VVLPGFRFHPTDEELVGFYLRRKVEKKPLRIELIKQIDIYKYDPWDLP-MSSVGEKEWYF 92

Query: 84  FCIRGRKYRNSIRPNRVTGSGFWKATGIDKPIHSAKEPHECIGLKKSLVYYRGSAGKGTK 143
           FCIRGRKYRNSIRPNRVTGSGFWKATGIDKPI+  +EP ECIGLKKSLVYYRGSAGKGTK
Sbjct: 93  FCIRGRKYRNSIRPNRVTGSGFWKATGIDKPIYCVREPQECIGLKKSLVYYRGSAGKGTK 152

Query: 144 TDWMMHEFRLPPNGKITNFSNTKDI--AQEAEVWTLCRIFKRTPSYKKYTPNWKDSSTVA 201
           TDWMMHEFRLPPNGK +N     D    QEAEVWTLCRIFKR P+YKKYTPN KDS    
Sbjct: 153 TDWMMHEFRLPPNGKTSNNPQANDANDVQEAEVWTLCRIFKRVPTYKKYTPNLKDS---- 208

Query: 202 AANATKLHNPTD-SSSKTCSSSLESE--------TSCEQQQYMHQQKETKPFIINHVD-Q 251
           AA  T+ ++PT+ SSSKTC  SLES+        T+    Q +  Q E KP I  HVD +
Sbjct: 209 AAPITEPNHPTNSSSSKTC--SLESDNCKPYLTFTNSSSPQLI-LQNERKPVINGHVDVE 265

Query: 252 RNHPLTTQSQLSPYPASYYSSLWNLNGDDFFTNGNWDELRSVVELAVDPPHVYD 305
           RNH L  Q        S+++   N N +  F N NWD+L SVV+ A+DP  V D
Sbjct: 266 RNHLLLGQLGNVAQAPSFWNHHQNNNVE--FANENWDDLTSVVQFAIDPSRVSD 317

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|363814338|ref|NP_001242810.1| uncharacterized protein LOC100810472 [Glycine max] gi|255635676|gb|ACU18187.1| unknown [Glycine max]

 Score =  359 bits (921), Expect = 9e-97,   Method: Compositional matrix adjust.
 Identities = 191/311 (61%), Positives = 220/311 (70%), Gaps = 27/311 (8%)

Query: 6   MSTTTTTSSDNKLQNHEEVMLPGFRFHPTDEELVGFYLRRKVEKKPISIEIIKQADIYKY 65
           M+    +S D K    EEV+LPGFRFHPTDEELVGFYL+RKV+KKP+ IE+IKQ DIYKY
Sbjct: 1   MNAKVHSSDDTK--EDEEVVLPGFRFHPTDEELVGFYLQRKVDKKPLKIELIKQVDIYKY 58

Query: 66  DPWDLPKVSTVGDKEWYFFCIRGRKYRNSIRPNRVTGSGFWKATGIDKPIHSAKEPHECI 125
           DPWDLPKV++ G+KEWYFFCIRGRKYRNS+RPNRVT SGFWKATGIDK I+  KEPHECI
Sbjct: 59  DPWDLPKVNSFGEKEWYFFCIRGRKYRNSVRPNRVTRSGFWKATGIDKSIYCVKEPHECI 118

Query: 126 GLKKSLVYYRGSAGKGTKTDWMMHEFRLPPNGKITNFSNTKDIAQEAEVWTLCRIFKRTP 185
           GLKKSLVYYRGSAGKGTKTDWMMHEFRLPPN K    SN  D+ QEAEVWTLCRIFKR P
Sbjct: 119 GLKKSLVYYRGSAGKGTKTDWMMHEFRLPPNAK----SNPNDL-QEAEVWTLCRIFKRIP 173

Query: 186 SYKKYTPNWKDSSTVAAANATKLHNPTDSSSKTCSS-SLESETSCEQQQYMHQQKETKPF 244
           S+KK TPN KDS+ V         NP +S++ T +S + E    C     M QQ E KP 
Sbjct: 174 SFKKCTPNLKDSTPVTKP------NPVNSNTFTLNSDNCEPYLICRDPMVM-QQIERKP- 225

Query: 245 IINHVDQRNHPLTTQSQLSPYPASY-------YSSLWNLNG--DDFFTNGNWDELRSVVE 295
           +I  VD++ H      Q  P P  +       Y + W+ N   D  F N NWD+LRSV +
Sbjct: 226 VIGQVDEKKHMFL--GQFGPLPHHFQAPSTTPYPNFWDQNNVEDYTFANENWDDLRSVAQ 283

Query: 296 LAVDPPHVYDC 306
            AVDP  V+DC
Sbjct: 284 FAVDPSTVFDC 294

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|296082752|emb|CBI21757.3| unnamed protein product [Vitis vinifera]

 Score =  331 bits (848), Expect = 3e-88,   Method: Compositional matrix adjust.
 Identities = 172/297 (57%), Positives = 210/297 (70%), Gaps = 22/297 (7%)

Query: 13  SSDNKLQNHEEVMLPGFRFHPTDEELVGFYLRRKVEKKPISIEIIKQADIYKYDPWDLPK 72
           SS +  ++ ++V+LPGFRFHPTDEELV FYL+RK+EKK ISIE IKQ DIYKY+PWDL K
Sbjct: 4   SSMDATKDDDQVVLPGFRFHPTDEELVSFYLQRKIEKKLISIEFIKQIDIYKYEPWDLAK 63

Query: 73  -VSTVGDKEWYFFCIRGRKYRNSIRPNRVTGSGFWKATGIDKPIHSAK-EPHECIGLKKS 130
            ++T+ DKEWYFFC RGRKYRNSIRPNRVT SGFWKATGIDKPI+S   E H+CIGLKKS
Sbjct: 64  NINTLTDKEWYFFCKRGRKYRNSIRPNRVTRSGFWKATGIDKPIYSNNGEGHDCIGLKKS 123

Query: 131 LVYYRGSAGKGTKTDWMMHEFRLPPNGKITNFSNTKDIAQEAEVWTLCRIFKRTPSYKKY 190
           LVYYRGSAGKGTKTDWMMHEFRLP N K TN  N K   QEAE+WTLCRIFKR  SY+KY
Sbjct: 124 LVYYRGSAGKGTKTDWMMHEFRLPANQKNTNLPNAKAADQEAEIWTLCRIFKRDVSYRKY 183

Query: 191 TPNWKDSSTVAAANATKLHNPTDSSSKTCSSSLES----ETSCEQQQYMHQQKETKPFII 246
           TP+W++SS          HNP ++ +KTC +  E+      S      +  +K  KP + 
Sbjct: 184 TPDWRESSA--------RHNPVNARTKTCDADSENLEYYNISFGASAALDDEK--KPVVG 233

Query: 247 NHVDQRNHPLTTQSQLSPYPASYYSSLWNLNGDDFFTNGNWDELRSVVELAVDPPHV 303
           + +D R      Q  +   P S  S++ +    +FFTNGNWDE+ S ++ A DP H+
Sbjct: 234 HSMDGR-----IQLHVGSEPES-CSTVLSEEAREFFTNGNWDEIVSAMDFAFDPYHL 284

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359494561|ref|XP_002265956.2| PREDICTED: NAC domain-containing protein 42 [Vitis vinifera]

 Score =  329 bits (844), Expect = 9e-88,   Method: Compositional matrix adjust.
 Identities = 170/291 (58%), Positives = 207/291 (71%), Gaps = 22/291 (7%)

Query: 19  QNHEEVMLPGFRFHPTDEELVGFYLRRKVEKKPISIEIIKQADIYKYDPWDLPK-VSTVG 77
           ++ ++V+LPGFRFHPTDEELV FYL+RK+EKK ISIE IKQ DIYKY+PWDL K ++T+ 
Sbjct: 5   KDDDQVVLPGFRFHPTDEELVSFYLQRKIEKKLISIEFIKQIDIYKYEPWDLAKNINTLT 64

Query: 78  DKEWYFFCIRGRKYRNSIRPNRVTGSGFWKATGIDKPIHSAK-EPHECIGLKKSLVYYRG 136
           DKEWYFFC RGRKYRNSIRPNRVT SGFWKATGIDKPI+S   E H+CIGLKKSLVYYRG
Sbjct: 65  DKEWYFFCKRGRKYRNSIRPNRVTRSGFWKATGIDKPIYSNNGEGHDCIGLKKSLVYYRG 124

Query: 137 SAGKGTKTDWMMHEFRLPPNGKITNFSNTKDIAQEAEVWTLCRIFKRTPSYKKYTPNWKD 196
           SAGKGTKTDWMMHEFRLP N K TN  N K   QEAE+WTLCRIFKR  SY+KYTP+W++
Sbjct: 125 SAGKGTKTDWMMHEFRLPANQKNTNLPNAKAADQEAEIWTLCRIFKRDVSYRKYTPDWRE 184

Query: 197 SSTVAAANATKLHNPTDSSSKTCSSSLES----ETSCEQQQYMHQQKETKPFIINHVDQR 252
           SS          HNP ++ +KTC +  E+      S      +  +K  KP + + +D R
Sbjct: 185 SSA--------RHNPVNARTKTCDADSENLEYYNISFGASAALDDEK--KPVVGHSMDGR 234

Query: 253 NHPLTTQSQLSPYPASYYSSLWNLNGDDFFTNGNWDELRSVVELAVDPPHV 303
                 Q  +   P S  S++ +    +FFTNGNWDE+ S ++ A DP H+
Sbjct: 235 -----IQLHVGSEPES-CSTVLSEEAREFFTNGNWDEIVSAMDFAFDPYHL 279

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	307
TAIR|locus:2045570	275	NAC042 "NAC domain containing	0.563	0.629	0.697	8.2e-67
TAIR|locus:2089205	303	AT3G12910 [Arabidopsis thalian	0.586	0.594	0.645	3.3e-63
TAIR|locus:2202820	418	FEZ "FEZ" [Arabidopsis thalian	0.530	0.389	0.641	1.9e-58
TAIR|locus:2056266	414	LOV1 "LONG VEGETATIVE PHASE 1"	0.514	0.381	0.523	5.6e-45
TAIR|locus:2198225	289	ATAF1 [Arabidopsis thaliana (t	0.517	0.550	0.506	1.6e-43
TAIR|locus:504956335	283	ATAF2 [Arabidopsis thaliana (t	0.602	0.653	0.461	1.7e-43
TAIR|locus:2160634	312	NAC102 "NAC domain containing	0.534	0.525	0.502	1.7e-43
TAIR|locus:2090186	364	NAC2 "NAC domain containing pr	0.557	0.469	0.474	2.2e-43
TAIR|locus:2007166	268	NAP "NAC-like, activated by AP	0.524	0.600	0.491	7.3e-43
TAIR|locus:2008490	323	NAC025 "NAC domain containing	0.521	0.495	0.485	1.5e-42

TAIR|locus:2045570 NAC042 "NAC domain containing protein 42" [Arabidopsis thaliana (taxid:3702)]

 Score = 679 (244.1 bits), Expect = 8.2e-67, P = 8.2e-67
 Identities = 129/185 (69%), Positives = 146/185 (78%)

Query:    19 QNHEEVMLPGFRFHPTDEELVGFYLRRKVEKKPISIEIIKQADIYKYDPWDLPKVSTVGD 78
             +   E  LPGFRFHPTDEEL+G+YLRRKVE K I +E+IKQ DIYKYDPWDLP+VS+VG+
Sbjct:    12 EEENEAPLPGFRFHPTDEELLGYYLRRKVENKTIKLELIKQIDIYKYDPWDLPRVSSVGE 71

Query:    79 KEWYFFCIRGRKYRNSIRPNRVTGSGFWKATGIDKPIHSAKEPHECIGLKKSLVYYRGSA 138
             KEWYFFC+RGRKYRNS+RPNRVTGSGFWKATGIDKP++S  +   C+GLKKSLVYY GSA
Sbjct:    72 KEWYFFCMRGRKYRNSVRPNRVTGSGFWKATGIDKPVYSNLD---CVGLKKSLVYYLGSA 128

Query:   139 GKGTKTDWMMHEFRLPPNGKITNFSNTKDIAQEAEVWTLCRIFKRTPSYKKYT---PNWK 195
             GKGTKTDWMMHEFRLP   K      T   AQ+AEVWTLCRIFKR  S +  T   PN K
Sbjct:   129 GKGTKTDWMMHEFRLPSTTK------TDSPAQQAEVWTLCRIFKRVTSQRNPTILPPNRK 182

Query:   196 DSSTV 200
                T+
Sbjct:   183 PVITL 187

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0010120 "camalexin biosynthetic process" evidence=IMP

GO:0005992 "trehalose biosynthetic process" evidence=IMP

GO:0006561 "proline biosynthetic process" evidence=IMP

GO:0009718 "anthocyanin-containing compound biosynthetic process" evidence=IMP

GO:0010150 "leaf senescence" evidence=IMP

GO:0042538 "hyperosmotic salinity response" evidence=IMP

GO:1900056 "negative regulation of leaf senescence" evidence=IMP

GO:0009627 "systemic acquired resistance" evidence=RCA

GO:0009723 "response to ethylene stimulus" evidence=RCA

GO:0034976 "response to endoplasmic reticulum stress" evidence=RCA

TAIR|locus:2089205 AT3G12910 [Arabidopsis thaliana (taxid:3702)]

 Score = 614 (221.2 bits), Expect = 3.3e-63, Sum P(2) = 3.3e-63
 Identities = 124/192 (64%), Positives = 143/192 (74%)

Query:    15 DNKLQNHEE--VMLPGFRFHPTDEELVGFYLRRKVE-KKPISI-EIIKQADIYKYDPWDL 70
             DN  ++ +E  + LPGFRFHPTDEELVG+YL +KV  KK   I EI+ Q DIYK+DPWDL
Sbjct:     9 DNTRESEDEDALKLPGFRFHPTDEELVGYYLSKKVLLKKTSKIDEIVSQIDIYKFDPWDL 68

Query:    71 PKVSTVGDKEWYFFCIRGRKYRNSIRPNRVTGSGFWKATGIDKPIHSAKEPHECIGLKKS 130
             P+ S   +KE YFFC RGRKYRNSIRPNRVTGSGFWKATGIDKP++S       IGLKK+
Sbjct:    69 PR-SRNTEKESYFFCKRGRKYRNSIRPNRVTGSGFWKATGIDKPVYSDGSNKAVIGLKKT 127

Query:   131 LVYYRGSAGKGTKTDWMMHEFRLP------PNGKITNFSNTKDIAQEAEVWTLCRIFKRT 184
             LVYY GSAGKG KTDWMMHEFRLP      P G  T+ + T      AEVWTLCRIFKRT
Sbjct:   128 LVYYLGSAGKGNKTDWMMHEFRLPTANDTIPGGP-THSNPTPTSLLHAEVWTLCRIFKRT 186

Query:   185 PSYKKYTPNWKD 196
              S +KYTP+W++
Sbjct:   187 VSSRKYTPDWRE 198

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA;TAS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

TAIR|locus:2202820 FEZ "FEZ" [Arabidopsis thaliana (taxid:3702)]

 Score = 600 (216.3 bits), Expect = 1.9e-58, P = 1.9e-58
 Identities = 109/170 (64%), Positives = 134/170 (78%)

Query:    19 QNHEEVMLPGFRFHPTDEELVGFYLRRKVEKKPISIEIIKQADIYKYDPWDLPKVSTVGD 78
             Q  E+V+LPGFRFHPTDEELV FYL+RKV+  P+SIE+I+Q DIYKYDPWDLPK +  G+
Sbjct:    10 QKMEDVLLPGFRFHPTDEELVSFYLKRKVQHNPLSIELIRQLDIYKYDPWDLPKFAMTGE 69

Query:    79 KEWYFFCIRGRKYRNSIRPNRVTGSGFWKATGIDKPIHSAKEPHECIGLKKSLVYYRGSA 138
             KEWYF+C R RKYRNS RPNRVTG+GFWKATG D+PI+S+ E ++CIGLKKSLV+Y+G A
Sbjct:    70 KEWYFYCPRDRKYRNSSRPNRVTGAGFWKATGTDRPIYSS-EGNKCIGLKKSLVFYKGRA 128

Query:   139 GKGTKTDWMMHEFRLP----PNGKITNFSNTKDIAQEAEVWTLCRIFKRT 184
              KG KTDWMMHEFRLP    P+     F ++     ++  W +CRIFK+T
Sbjct:   129 AKGVKTDWMMHEFRLPSLSEPSPPSKRFFDSPVSPNDS--WAICRIFKKT 176

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM;IDA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0009733 "response to auxin stimulus" evidence=IEP

GO:0045770 "positive regulation of asymmetric cell division" evidence=IMP

GO:0048103 "somatic stem cell division" evidence=IMP

GO:0048829 "root cap development" evidence=IMP

TAIR|locus:2056266 LOV1 "LONG VEGETATIVE PHASE 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 473 (171.6 bits), Expect = 5.6e-45, P = 5.6e-45
 Identities = 89/170 (52%), Positives = 126/170 (74%)

Query:    15 DNKLQNHE-EVMLPGFRFHPTDEELVGFYLRRKVEKKPISIEIIKQADIYKYDPWDLPKV 73
             +++  +H+ ++++PGFRFHPT+EEL+ FYLRRKVE K  ++E+I   D+Y+YDPW+LP +
Sbjct:    40 EDEADDHDHDMVMPGFRFHPTEEELIEFYLRRKVEGKRFNVELITFLDLYRYDPWELPAM 99

Query:    74 STVGDKEWYFFCIRGRKYRNSIRPNRVTGSGFWKATGIDKPIHSAKEPHECIGLKKSLVY 133
             + +G+KEWYF+  R RKYRN  RPNRVT SG+WKATG D+ I S  E    IGLKK+LV+
Sbjct:   100 AAIGEKEWYFYVPRDRKYRNGDRPNRVTTSGYWKATGADRMIRS--ETSRPIGLKKTLVF 157

Query:   134 YRGSAGKGTKTDWMMHEFRLPPNGKITNFSNTKDIAQEAEVWTLCRIFKR 183
             Y G A KGT+T W+M+E+RLP +        T+   Q+AE+ +LCR++KR
Sbjct:   158 YSGKAPKGTRTSWIMNEYRLPHH-------ETEKY-QKAEI-SLCRVYKR 198

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

TAIR|locus:2198225 ATAF1 [Arabidopsis thaliana (taxid:3702)]

 Score = 438 (159.2 bits), Expect = 1.6e-43, Sum P(2) = 1.6e-43
 Identities = 84/166 (50%), Positives = 109/166 (65%)

Query:    27 PGFRFHPTDEELVGFYLRRKVEKKPISIEIIKQADIYKYDPWDLPKVSTVGDKEWYFFCI 86
             PGFRFHPTDEELV  YL RK   + I++ II + D+YKYDPW+LP ++  G+KEWYFF  
Sbjct:     9 PGFRFHPTDEELVMHYLCRKCASQSIAVPIIAEIDLYKYDPWELPGLALYGEKEWYFFSP 68

Query:    87 RGRKYRNSIRPNRVTGSGFWKATGIDKPIHSAKEPHECIGLKKSLVYYRGSAGKGTKTDW 146
             R RKY N  RPNR  GSG+WKATG DKPI   K P   +G+KK+LV+Y G A KG KT+W
Sbjct:    69 RDRKYPNGSRPNRSAGSGYWKATGADKPIGLPK-P---VGIKKALVFYAGKAPKGEKTNW 124

Query:   147 MMHEFRLPPNGKITNFSNTKDIAQEAEVWTLCRIFKRTPSYKKYTP 192
             +MHE+RL     +      K  +   + W LCRI+ +  + ++  P
Sbjct:   125 IMHEYRL---ADVDRSVRKKKNSLRLDDWVLCRIYNKKGATERRGP 167

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0009611 "response to wounding" evidence=IEP;RCA

GO:0009788 "negative regulation of abscisic acid mediated signaling pathway" evidence=IMP

GO:0009414 "response to water deprivation" evidence=RCA

GO:0009620 "response to fungus" evidence=RCA

GO:0009695 "jasmonic acid biosynthetic process" evidence=RCA

GO:0009737 "response to abscisic acid stimulus" evidence=RCA

GO:0009753 "response to jasmonic acid stimulus" evidence=RCA

GO:0010200 "response to chitin" evidence=RCA

GO:0042538 "hyperosmotic salinity response" evidence=RCA

TAIR|locus:504956335 ATAF2 [Arabidopsis thaliana (taxid:3702)]

 Score = 459 (166.6 bits), Expect = 1.7e-43, P = 1.7e-43
 Identities = 89/193 (46%), Positives = 125/193 (64%)

Query:    23 EVMLP-GFRFHPTDEELVGFYLRRKVEKKPISIEIIKQADIYKYDPWDLPKVSTVGDKEW 81
             E+ LP GFRFHPTDEELV FYL RK   + IS  +I + D+YK++PW+LP++S  G+KEW
Sbjct:     4 ELNLPAGFRFHPTDEELVKFYLCRKCASEQISAPVIAEIDLYKFNPWELPEMSLYGEKEW 63

Query:    82 YFFCIRGRKYRNSIRPNRVTGSGFWKATGIDKPIHSAKEPHECIGLKKSLVYYRGSAGKG 141
             YFF  R RKY N  RPNR  G+G+WKATG DKPI   K     +G+KK+LV+Y G A KG
Sbjct:    64 YFFSPRDRKYPNGSRPNRAAGTGYWKATGADKPIGKPKT----LGIKKALVFYAGKAPKG 119

Query:   142 TKTDWMMHEFRLPPNGKITNFSNTKDIAQEAEVWTLCRIFKRTPSYKKYTP-NWKDSSTV 200
              KT+W+MHE+RL    +  + +   ++    + W LCRI+ +  + +KY P + K  +T 
Sbjct:   120 IKTNWIMHEYRLANVDRSASVNKKNNL--RLDDWVLCRIYNKKGTMEKYFPADEKPRTTT 177

Query:   201 AAANATKLHNPTD 213
              A  ++   + +D
Sbjct:   178 MAEQSSSPFDTSD 190

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM;IDA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0009611 "response to wounding" evidence=IEP

GO:0008361 "regulation of cell size" evidence=IMP

GO:0009416 "response to light stimulus" evidence=IEP

GO:0009620 "response to fungus" evidence=IMP

GO:0009744 "response to sucrose stimulus" evidence=IEP

GO:0009751 "response to salicylic acid stimulus" evidence=IEP

GO:0009753 "response to jasmonic acid stimulus" evidence=IEP

GO:0043424 "protein histidine kinase binding" evidence=IPI

TAIR|locus:2160634 NAC102 "NAC domain containing protein 102" [Arabidopsis thaliana (taxid:3702)]

 Score = 459 (166.6 bits), Expect = 1.7e-43, P = 1.7e-43
 Identities = 86/171 (50%), Positives = 119/171 (69%)

Query:    23 EVMLP-GFRFHPTDEELVGFYLRRKVEKKPISIEIIKQADIYKYDPWDLPKVSTVGDKEW 81
             E+ LP GFRFHPTDEELV FYL R+   +PI++ +I + D+YK++PW+LP+++  G+KEW
Sbjct:    47 ELNLPAGFRFHPTDEELVKFYLCRRCASEPINVPVIAEIDLYKFNPWELPEMALYGEKEW 106

Query:    82 YFFCIRGRKYRNSIRPNRVTGSGFWKATGIDKPIHSAKEPHECIGLKKSLVYYRGSAGKG 141
             YFF  R RKY N  RPNR  G+G+WKATG DKPI   K     +G+KK+LV+Y G A KG
Sbjct:   107 YFFSHRDRKYPNGSRPNRAAGTGYWKATGADKPIGKPKT----LGIKKALVFYAGKAPKG 162

Query:   142 TKTDWMMHEFRLPPNGKITNFSNTKDIAQEAEVWTLCRIFKRTPSYKKYTP 192
              KT+W+MHE+RL  N   +  +N K+  +  + W LCRI+ +  + +KY P
Sbjct:   163 IKTNWIMHEYRLA-NVDRSASTNKKNNLR-LDDWVLCRIYNKKGTMEKYLP 211

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0001666 "response to hypoxia" evidence=IMP

GO:0009507 "chloroplast" evidence=IDA

GO:0005515 "protein binding" evidence=IPI

GO:0030968 "endoplasmic reticulum unfolded protein response" evidence=RCA

TAIR|locus:2090186 NAC2 "NAC domain containing protein 2" [Arabidopsis thaliana (taxid:3702)]

 Score = 458 (166.3 bits), Expect = 2.2e-43, P = 2.2e-43
 Identities = 85/179 (47%), Positives = 119/179 (66%)

Query:    27 PGFRFHPTDEELVGFYLRRKVEKKPISIEIIKQADIYKYDPWDLPKVSTVGDKEWYFFCI 86
             PGFRFHPTDEELV  YL+RK    P+ + II + D+YK+DPW+LP  ++ G++EWYFF  
Sbjct:    19 PGFRFHPTDEELVVHYLKRKAASAPLPVAIIAEVDLYKFDPWELPAKASFGEQEWYFFSP 78

Query:    87 RGRKYRNSIRPNRVTGSGFWKATGIDKPIHSAKEPHECIGLKKSLVYYRGSAGKGTKTDW 146
             R RKY N  RPNR   SG+WKATG DKP+  A + ++ +G+KK+LV+Y G   KG K+DW
Sbjct:    79 RDRKYPNGARPNRAATSGYWKATGTDKPV-LASDGNQKVGVKKALVFYSGKPPKGVKSDW 137

Query:   147 MMHEFRL---PPNGKIT--NFSNTKDIAQEAEVWTLCRIFKRTPSYKKYTPNWKDSSTV 200
             +MHE+RL    PN +    +F N K+ +   + W LCRI+K+  +  ++  N KD   +
Sbjct:   138 IMHEYRLIENKPNNRPPGCDFGNKKN-SLRLDDWVLCRIYKKNNA-SRHVDNDKDHDMI 194

GO:0003677 "DNA binding" evidence=IEA

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS;NAS

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

TAIR|locus:2007166 NAP "NAC-like, activated by AP3/PI" [Arabidopsis thaliana (taxid:3702)]

 Score = 453 (164.5 bits), Expect = 7.3e-43, P = 7.3e-43
 Identities = 82/167 (49%), Positives = 110/167 (65%)

Query:    22 EEVMLPGFRFHPTDEELVGFYLRRKVEKKPISIEIIKQADIYKYDPWDLPKVSTVGDKEW 81
             +  + PGFRFHPTDEEL+ +YLR +   KP  + II + DIYK+DPW LP+ +  G+ EW
Sbjct:     6 QSTLPPGFRFHPTDEELIVYYLRNQTMSKPCPVSIIPEVDIYKFDPWQLPEKTEFGENEW 65

Query:    82 YFFCIRGRKYRNSIRPNRVTGSGFWKATGIDKPIHSAKEPHECIGLKKSLVYYRGSAGKG 141
             YFF  R RKY N +RPNR   SG+WKATG DK IHS       +G+KK+LV+Y+G   KG
Sbjct:    66 YFFSPRERKYPNGVRPNRAAVSGYWKATGTDKAIHSGSSN---VGVKKALVFYKGRPPKG 122

Query:   142 TKTDWMMHEFRLPPNGKITNFSNTKDIAQEAEVWTLCRIFKRTPSYK 188
              KTDW+MHE+RL  + K    S  ++ +   + W LCRI+K+  + K
Sbjct:   123 IKTDWIMHEYRLHDSRKA---STKRNGSMRLDEWVLCRIYKKRGASK 166

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM;IDA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0010150 "leaf senescence" evidence=IMP

GO:0009617 "response to bacterium" evidence=RCA

GO:0045087 "innate immune response" evidence=RCA

GO:0009825 "multidimensional cell growth" evidence=IMP

GO:0009908 "flower development" evidence=IMP

TAIR|locus:2008490 NAC025 "NAC domain containing protein 25" [Arabidopsis thaliana (taxid:3702)]

 Score = 450 (163.5 bits), Expect = 1.5e-42, P = 1.5e-42
 Identities = 81/167 (48%), Positives = 111/167 (66%)

Query:    27 PGFRFHPTDEELVGFYLRRKVEKKPISIEIIKQADIYKYDPWDLPKVSTVGDKEWYFFCI 86
             PGFRFHPTDEELV  YL++K +  P+ + II + D+YK+DPW+LP  ++ G+ EWYFF  
Sbjct:    18 PGFRFHPTDEELVVHYLKKKADSVPLPVSIIAEIDLYKFDPWELPSKASFGEHEWYFFSP 77

Query:    87 RGRKYRNSIRPNRVTGSGFWKATGIDKPIHSAKEPHECIGLKKSLVYYRGSAGKGTKTDW 146
             R RKY N +RPNR   SG+WKATG DKPI +    H+ +G+KK+LV+Y G   KG KTDW
Sbjct:    78 RDRKYPNGVRPNRAATSGYWKATGTDKPIFTCNS-HK-VGVKKALVFYGGKPPKGIKTDW 135

Query:   147 MMHEFRLPPNGKIT-----NFSNTKDIAQEAEVWTLCRIFKRTPSYK 188
             +MHE+RL      T     + + T+  +   + W LCRI+K+  S +
Sbjct:   136 IMHEYRLTDGNLSTAAKPPDLTTTRKNSLRLDDWVLCRIYKKNSSQR 182

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q9SK55	NAC42_ARATH	No assigned EC number	0.5382	0.8762	0.9781	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	307
pfam02365	130	pfam02365, NAM, No apical meristem (NAM) protein	7e-70

>gnl|CDD|216997 pfam02365, NAM, No apical meristem (NAM) protein

 Score =  212 bits (542), Expect = 7e-70
 Identities = 78/132 (59%), Positives = 99/132 (75%), Gaps = 4/132 (3%)

Query: 25  MLPGFRFHPTDEELVGFYLRRKVEKKPISI-EIIKQADIYKYDPWDLPK-VSTVGDKEWY 82
           + PGFRFHPTDEELV +YL+RKV  KP+ + ++I + DIYK++PWDLP   +  GD+EWY
Sbjct: 1   LPPGFRFHPTDEELVVYYLKRKVLGKPLPLLDVIPEVDIYKFEPWDLPDGKAKGGDREWY 60

Query: 83  FFCIRGRKYRNSIRPNRVTGSGFWKATGIDKPIHSAKEPHECIGLKKSLVYYRGSAGKGT 142
           FF  R RKY N  R NR TGSG+WKATG DKP+ S     E +G+KK+LV+Y+G A KG 
Sbjct: 61  FFSPRDRKYPNGSRTNRATGSGYWKATGKDKPVLSKG--GEVVGMKKTLVFYKGRAPKGE 118

Query: 143 KTDWMMHEFRLP 154
           KTDW+MHE+RL 
Sbjct: 119 KTDWVMHEYRLE 130

This is a family of no apical meristem (NAM) proteins these are plant development proteins. Mutations in NAM result in the failure to develop a shoot apical meristem in petunia embryos. NAM is indicated as having a role in determining positions of meristems and primordial. One member of this family NAP (NAC-like, activated by AP3/PI) is encoded by the target genes of the AP3/PI transcriptional activators and functions in the transition between growth by cell division and cell expansion in stamens and petals. Length = 130

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	307
PF02365	129	NAM: No apical meristem (NAM) protein; InterPro: I	100.0

>PF02365 NAM: No apical meristem (NAM) protein; InterPro: IPR003441 The NAC domain (for Petunia hybrida (Petunia) NAM and for Arabidopsis ATAF1, ATAF2, and CUC2) is an N-terminal module of ~160 amino acids, which is found in proteins of the NAC family of plant-specific transcriptional regulators (no apical meristem (NAM) proteins) []

Probab=100.00  E-value=9e-43  Score=292.04  Aligned_cols=128  Identities=52%  Similarity=1.037  Sum_probs=96.8

Q ss_pred             CCCCceecCChHHHHHHHHHHHHhCCCCCc-CceeeccCCCCCCCCCCCccCCCCceEEEEeeeccccCCCCCCcccccC
Q 021785           25 MLPGFRFHPTDEELVGFYLRRKVEKKPISI-EIIKQADIYKYDPWDLPKVSTVGDKEWYFFCIRGRKYRNSIRPNRVTGS  103 (307)
Q Consensus        25 lpPGfRF~PTDeELV~~YL~~Ki~g~pl~~-~~I~~~DVY~~~PwdLp~~~~~gd~ewYFFs~r~~k~~~g~R~~R~tg~  103 (307)
                      |||||||+|||+|||.+||++|+.|.+++. .+|+++|||++|||+|++....++++||||+++++++.++.|.+|++++
T Consensus         1 LP~G~rF~PtD~ELi~~yL~~k~~g~~~~~~~~i~~~Diy~~~P~~L~~~~~~~~~~~yFF~~~~~~~~~~~r~~R~~~~   80 (129)
T PF02365_consen    1 LPPGFRFRPTDEELINHYLRPKILGEPLPCEDVIHDVDIYSAHPWELPAKFKGGDEEWYFFSPRKKKYPNGGRPNRVTGG   80 (129)
T ss_dssp             --TTEEE---HHHHHHCTHHHHHTT-HHCS-CHSEE--GGGS-GGGCHHHSSS-SSEEEEEEE----------S-EEETT
T ss_pred             CCCceEecCChHHHHHHHHHHHhcCCCCCcccceeecccCccChHHhhhhccCCCceEEEEEecccccCCcccccccccc
Confidence            799999999999999999999999999887 6999999999999999953333677999999999999999999999999


Q ss_pred             ceeeecCCCcceecCCCCceeeEEEEEEeeecCCCCCCCccCceeeeEEcC
Q 021785          104 GFWKATGIDKPIHSAKEPHECIGLKKSLVYYRGSAGKGTKTDWMMHEFRLP  154 (307)
Q Consensus       104 G~Wk~~G~~k~I~~~~~~g~~IG~Kk~L~Fy~g~~~~~~kT~W~MhEYrL~  154 (307)
                      |+||++|+.++|...  ++.+||+|++|+||.++.+++.+|+|+||||+|.
T Consensus        81 G~Wk~~g~~~~i~~~--~g~~iG~k~~l~f~~~~~~~~~kt~W~M~EY~L~  129 (129)
T PF02365_consen   81 GYWKSTGKEKPIKDP--GGKVIGFKKTLVFYSGKSPNGKKTGWVMHEYSLE  129 (129)
T ss_dssp             EEEEEECEEEEEEE---TTCEEEEEEEEEEEESSTTS-EEEEEEEEEEEE-
T ss_pred             eEEeecccccccccc--cceeeeeEEEEEEEeccCCCCCcCCeEEEEEEeC
Confidence            999999999999985  6899999999999998888899999999999983

NAC proteins are involved in developmental processes, including formation of the shoot apical meristem, floral organs and lateral shoots, as well as in plant hormonal control and defence. The NAC domain is accompanied by diverse C-terminal transcriptional activation domains. The NAC domain has been shown to be a DNA-binding domain (DBD) and a dimerization domain [,]. The NAC domain can be subdivided into five subdomains (A-E). Each subdomain is distinguishable by blocks of heterogeneous amino acids or gaps. While the NAC domains were rich in basic amino acids (R, K and H) as a whole, the distribution of positive and negative amino acids in each subdomain were unequal. Subdomains C and D are rich in basic amino acids but poor in acidic amino acids, while subdomain B contains a high proportion of acidic amino acids. Putative nuclear localization signals (NLS) have been detected in subdomains C and D []. The DBD is contained within a 60 amino acid region located within subdomains D and E []. The overall structure of the NAC domain monomer consists of a very twisted antiparallel beta-sheet, which packs against an N-terminal alpha-helix on one side and one shorter helix on the other side surrounded by a few helical elements. The structure suggests that the NAC domain mediates dimerization through conserved interactions including a salt bridge, and DNA binding through the NAC dimer face rich in positive charges [].; GO: 0003677 DNA binding, 0006355 regulation of transcription, DNA-dependent; PDB: 1UT4_A 3SWM_B 4DUL_B 3SWP_D 1UT7_B 3ULX_A.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	307
3swm_A	174	The Nac Domain Of Anac019 In Complex With Dna, Gold		1e-39
1ut4_A	171	Structure Of The Conserved Domain Of Anac, A Member		1e-39
3ulx_A	174	Crystal Structural Of The Conserved Domain Of Rice		6e-39

>pdb|3SWM|A Chain A, The Nac Domain Of Anac019 In Complex With Dna, Gold Derivative Length = 174

Iteration: 1
 Score =  160 bits (404), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 81/163 (49%), Positives = 106/163 (65%), Gaps = 10/163 (6%)
Query: 27  PGFRFHPTDEELVGFYLRRKVEKKPISIEIIKQADIYKYDPWDLPKVSTVGDKEWYFFCI 86
           PGFRF+PTDEEL+  YL RK      S+++I + D+YK+DPW LP  +  G+KEWYFF  
Sbjct: 22  PGFRFYPTDEELMVQYLCRKAAGYDFSLQLIAEIDLYKFDPWVLPNKALFGEKEWYFFSP 81
Query: 87  RGRKYRNSIRPNRVTGSGFWKATGIDKPIHSAKEPHECIGLKKSLVYYRGSAGKGTKTDW 146
           R RKY N  RPNRV GSG+WKATG DK I +     + +G+KK+LV+Y G A KGTKT+W
Sbjct: 82  RDRKYPNGSRPNRVAGSGYWKATGTDKIISTE---GQRVGIKKALVFYIGKAPKGTKTNW 138
Query: 147 MMHEFRLPPNGKITNFSNTKDIAQEAEVWTLCRIFKRTPSYKK 189
           +MHE+RL    +    +   D       W LCRI+K+  S +K
Sbjct: 139 IMHEYRLIEPSRRNGSTKLDD-------WVLCRIYKKQSSAQK 174

>pdb|1UT4|A Chain A, Structure Of The Conserved Domain Of Anac, A Member Of The Nac Family Of Transcription Factors Length = 171

Iteration: 1
 Score =  160 bits (404), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 81/163 (49%), Positives = 106/163 (65%), Gaps = 10/163 (6%)
Query: 27  PGFRFHPTDEELVGFYLRRKVEKKPISIEIIKQADIYKYDPWDLPKVSTVGDKEWYFFCI 86
           PGFRF+PTDEEL+  YL RK      S+++I + D+YK+DPW LP  +  G+KEWYFF  
Sbjct: 19  PGFRFYPTDEELMVQYLCRKAAGYDFSLQLIAEIDLYKFDPWVLPNKALFGEKEWYFFSP 78
Query: 87  RGRKYRNSIRPNRVTGSGFWKATGIDKPIHSAKEPHECIGLKKSLVYYRGSAGKGTKTDW 146
           R RKY N  RPNRV GSG+WKATG DK I +     + +G+KK+LV+Y G A KGTKT+W
Sbjct: 79  RDRKYPNGSRPNRVAGSGYWKATGTDKIISTE---GQRVGIKKALVFYIGKAPKGTKTNW 135
Query: 147 MMHEFRLPPNGKITNFSNTKDIAQEAEVWTLCRIFKRTPSYKK 189
           +MHE+RL    +    +   D       W LCRI+K+  S +K
Sbjct: 136 IMHEYRLIEPSRRNGSTKLDD-------WVLCRIYKKQSSAQK 171

>pdb|3ULX|A Chain A, Crystal Structural Of The Conserved Domain Of Rice Stress-Responsive Nac1 Length = 174

Iteration: 1
 Score =  157 bits (397), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 76/163 (46%), Positives = 105/163 (64%), Gaps = 5/163 (3%)
Query: 27  PGFRFHPTDEELVGFYLRRKVEKKPISIEIIKQADIYKYDPWDLPKVSTVGDKEWYFFCI 86
           PGFRFHPTD+ELV  YL RK   + + + II + D+YK+DPWDLP+ +  G +EWYFF  
Sbjct: 17  PGFRFHPTDDELVEHYLCRKAAGQRLPVPIIAEVDLYKFDPWDLPERALFGAREWYFFTP 76
Query: 87  RGRKYRNSIRPNRVTGSGFWKATGIDKPIHSAKEPHECIGLKKSLVYYRGSAGKGTKTDW 146
           R RKY N  RPNR  G+G+WKATG DKP+         +G+KK+LV+Y G A +G KTDW
Sbjct: 77  RDRKYPNGSRPNRAAGNGYWKATGADKPVAPR---GRTLGIKKALVFYAGKAPRGVKTDW 133
Query: 147 MMHEFRLPPNGKITNFSNTKDIAQEAEVWTLCRIFKRTPSYKK 189
           +MHE+RL   G+    +    +    + W LCR++ +   ++K
Sbjct: 134 IMHEYRLADAGRAAAGAKKGSL--RLDDWVLCRLYNKKNEWEK 174

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	307
3ulx_A	174	Stress-induced transcription factor NAC1; NAC fami	2e-90
1ut7_A	171	No apical meristem protein; transcription regulati	6e-89

>3ulx_A Stress-induced transcription factor NAC1; NAC family, stress-responsive, DNA binding protein; 2.60A {Oryza sativa subsp} Length = 174

 Score =  266 bits (681), Expect = 2e-90
 Identities = 78/171 (45%), Positives = 107/171 (62%), Gaps = 5/171 (2%)

Query: 19  QNHEEVMLPGFRFHPTDEELVGFYLRRKVEKKPISIEIIKQADIYKYDPWDLPKVSTVGD 78
              E  + PGFRFHPTD+ELV  YL RK   + + + II + D+YK+DPWDLP+ +  G 
Sbjct: 9   AEAELNLPPGFRFHPTDDELVEHYLCRKAAGQRLPVPIIAEVDLYKFDPWDLPERALFGA 68

Query: 79  KEWYFFCIRGRKYRNSIRPNRVTGSGFWKATGIDKPIHSAKEPHECIGLKKSLVYYRGSA 138
           +EWYFF  R RKY N  RPNR  G+G+WKATG DKP+         +G+KK+LV+Y G A
Sbjct: 69  REWYFFTPRDRKYPNGSRPNRAAGNGYWKATGADKPVAPRGRT---LGIKKALVFYAGKA 125

Query: 139 GKGTKTDWMMHEFRLPPNGKITNFSNTKDIAQEAEVWTLCRIFKRTPSYKK 189
            +G KTDW+MHE+RL   G     +  K  +   + W LCR++ +   ++K
Sbjct: 126 PRGVKTDWIMHEYRLADAG--RAAAGAKKGSLRLDDWVLCRLYNKKNEWEK 174

>1ut7_A No apical meristem protein; transcription regulation, transcription, transcription factor, DNA binding, abscisic acid response, NAC domain; 1.9A {Arabidopsis thaliana} SCOP: b.143.1.1 PDB: 1ut4_A 4dul_A 3swp_A 3swm_A Length = 171

 Score =  261 bits (670), Expect = 6e-89
 Identities = 81/169 (47%), Positives = 110/169 (65%), Gaps = 11/169 (6%)

Query: 22  EEVMLP-GFRFHPTDEELVGFYLRRKVEKKPISIEIIKQADIYKYDPWDLPKVSTVGDKE 80
            ++ LP GFRF+PTDEEL+  YL RK      S+++I + D+YK+DPW LP  +  G+KE
Sbjct: 13  TQLSLPPGFRFYPTDEELMVQYLCRKAAGYDFSLQLIAEIDLYKFDPWVLPNKALFGEKE 72

Query: 81  WYFFCIRGRKYRNSIRPNRVTGSGFWKATGIDKPIHSAKEPHECIGLKKSLVYYRGSAGK 140
           WYFF  R RKY N  RPNRV GSG+WKATG DK I +  +    +G+KK+LV+Y G A K
Sbjct: 73  WYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKIISTEGQR---VGIKKALVFYIGKAPK 129

Query: 141 GTKTDWMMHEFRLPPNGKITNFSNTKDIAQEAEVWTLCRIFKRTPSYKK 189
           GTKT+W+MHE+RL    +          + + + W LCRI+K+  S +K
Sbjct: 130 GTKTNWIMHEYRLIEPSRRNG-------STKLDDWVLCRIYKKQSSAQK 171

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	307
3ulx_A	174	Stress-induced transcription factor NAC1; NAC fami	100.0
1ut7_A	171	No apical meristem protein; transcription regulati	100.0

>3ulx_A Stress-induced transcription factor NAC1; NAC family, stress-responsive, DNA binding protein; 2.60A {Oryza sativa subsp} SCOP: b.143.1.1

Probab=100.00  E-value=4.4e-55  Score=384.34  Aligned_cols=163  Identities=47%  Similarity=0.974  Sum_probs=135.2

Q ss_pred             CCCCCCCCCceecCChHHHHHHHHHHHHhCCCCCcCceeeccCCCCCCCCCCCccCCCCceEEEEeeeccccCCCCCCcc
Q 021785           20 NHEEVMLPGFRFHPTDEELVGFYLRRKVEKKPISIEIIKQADIYKYDPWDLPKVSTVGDKEWYFFCIRGRKYRNSIRPNR   99 (307)
Q Consensus        20 ~~~~~lpPGfRF~PTDeELV~~YL~~Ki~g~pl~~~~I~~~DVY~~~PwdLp~~~~~gd~ewYFFs~r~~k~~~g~R~~R   99 (307)
                      .....|||||||+|||||||.|||++|+.|.+++..+|+++|||++|||+||+.+..++++|||||++.+||++|.|++|
T Consensus        10 ~~~~~LPpGfRF~PTDeELV~~YL~~K~~g~~~~~~~I~evDvy~~~Pw~Lp~~~~~g~~ewYFFs~r~~ky~~g~R~nR   89 (174)
T 3ulx_A           10 EAELNLPPGFRFHPTDDELVEHYLCRKAAGQRLPVPIIAEVDLYKFDPWDLPERALFGAREWYFFTPRDRKYPNGSRPNR   89 (174)
T ss_dssp             CSTTTCCTTCCCCCCHHHHHHHTHHHHHHTCCCSSSCCEECCGGGSCGGGSGGGCSSCSSEEEEEEECCC-----CCSCE
T ss_pred             ccccCCCCcceeCCCHHHHHHHHHHHHhcCCCCCcCeeeecccccCCchhhhhhhccCCceEEEEeccccccCCCCCcee
Confidence            33456999999999999999999999999999999999999999999999999877788899999999999999999999


Q ss_pred             cccCceeeecCCCcceecCCCCceeeEEEEEEeeecCCCCCCCccCceeeeEEcCCCCCCCCCCCCccccccCCceEEEE
Q 021785          100 VTGSGFWKATGIDKPIHSAKEPHECIGLKKSLVYYRGSAGKGTKTDWMMHEFRLPPNGKITNFSNTKDIAQEAEVWTLCR  179 (307)
Q Consensus       100 ~tg~G~Wk~~G~~k~I~~~~~~g~~IG~Kk~L~Fy~g~~~~~~kT~W~MhEYrL~~~~~~~~~~~~~~~~~e~~~~VLCR  179 (307)
                      ++++||||++|++++|...   |.+||+||+|+||.|+++++.||+|+||||+|......... + .......++|||||
T Consensus        90 ~t~~G~WkatG~dk~I~~~---g~~vG~KktLvFy~g~~p~g~kT~WvMhEY~L~~~~~~~~~-~-~~~~~~~~~wVlCr  164 (174)
T 3ulx_A           90 AAGNGYWKATGADKPVAPR---GRTLGIKKALVFYAGKAPRGVKTDWIMHEYRLADAGRAAAG-A-KKGSLRLDDWVLCR  164 (174)
T ss_dssp             EETTEEEEECSCCEEECCS---SSCCEEEEEEEEEESSTTSCEEEEEEEEEEEECSCC-------------CCSSEEEEE
T ss_pred             ecCCceEccCCCCcEEeeC---CcEEEEEEEEEEecCCCCCCCcCCeEEEEEEeCCCCCcccc-c-ccCCCCCCCEEEEE
Confidence            9999999999999999864   78999999999999999999999999999999887533210 0 11113457899999


Q ss_pred             EEeeCCCC
Q 021785          180 IFKRTPSY  187 (307)
Q Consensus       180 Ifkk~~~~  187 (307)
                      ||+|++..
T Consensus       165 vf~K~~~~  172 (174)
T 3ulx_A          165 LYNKKNEW  172 (174)
T ss_dssp             EEESCC--
T ss_pred             EEEcCCCc
Confidence            99987653

>1ut7_A No apical meristem protein; transcription regulation, transcription, transcription factor, DNA binding, abscisic acid response, NAC domain; 1.9A {Arabidopsis thaliana} SCOP: b.143.1.1 PDB: 1ut4_A 4dul_A 3swp_A 3swm_A

Probab=100.00  E-value=3.5e-55  Score=384.16  Aligned_cols=157  Identities=50%  Similarity=0.950  Sum_probs=130.7

Q ss_pred             CCCCCCCceecCChHHHHHHHHHHHHhCCCCCcCceeeccCCCCCCCCCCCccCCCCceEEEEeeeccccCCCCCCcccc
Q 021785           22 EEVMLPGFRFHPTDEELVGFYLRRKVEKKPISIEIIKQADIYKYDPWDLPKVSTVGDKEWYFFCIRGRKYRNSIRPNRVT  101 (307)
Q Consensus        22 ~~~lpPGfRF~PTDeELV~~YL~~Ki~g~pl~~~~I~~~DVY~~~PwdLp~~~~~gd~ewYFFs~r~~k~~~g~R~~R~t  101 (307)
                      ...|||||||+|||||||.|||++|+.|.+++..+|+++|||++|||+||+.+..++++|||||++.++|++|.|++|+|
T Consensus        14 ~~~lPpGfRF~PTDeELv~~YL~~K~~g~~~~~~~I~e~Diy~~~Pw~Lp~~~~~g~~ewyFFs~r~~k~~~g~R~~R~t   93 (171)
T 1ut7_A           14 QLSLPPGFRFYPTDEELMVQYLCRKAAGYDFSLQLIAEIDLYKFDPWVLPNKALFGEKEWYFFSPRDRKYPNGSRPNRVA   93 (171)
T ss_dssp             SSCCCTTEEECCCHHHHHHHTHHHHHTTCCCSSCCSEECCGGGSCGGGHHHHSSSCSSEEEEEEECCC-------CCEEE
T ss_pred             ccCCCCcceeCCChHHHHHHHHHHHhcCCCCCCCeEeecccccCChhHhhchhhcCCccEEEEeccccccCCCCcccccC
Confidence            34699999999999999999999999999999999999999999999999987778899999999999999999999999


Q ss_pred             cCceeeecCCCcceecCCCCceeeEEEEEEeeecCCCCCCCccCceeeeEEcCCCCCCCCCCCCccccccCCceEEEEEE
Q 021785          102 GSGFWKATGIDKPIHSAKEPHECIGLKKSLVYYRGSAGKGTKTDWMMHEFRLPPNGKITNFSNTKDIAQEAEVWTLCRIF  181 (307)
Q Consensus       102 g~G~Wk~~G~~k~I~~~~~~g~~IG~Kk~L~Fy~g~~~~~~kT~W~MhEYrL~~~~~~~~~~~~~~~~~e~~~~VLCRIf  181 (307)
                      ++|+||++|++++|...   +.+||+||+|+||+|+++++.||+|+||||+|......       ......++|||||||
T Consensus        94 ~~G~Wk~tG~~k~I~~~---~~~vG~KktLvFy~g~~p~g~kT~WvMhEY~l~~~~~~-------~~~~~~~~~VlCrv~  163 (171)
T 1ut7_A           94 GSGYWKATGTDKIISTE---GQRVGIKKALVFYIGKAPKGTKTNWIMHEYRLIEPSRR-------NGSTKLDDWVLCRIY  163 (171)
T ss_dssp             TTEEEEEEEEEEEEEET---TEEEEEEEEEEEEESSTTSCEEEEEEEEEEEECCCC---------------CCEEEEEEE
T ss_pred             CCCEEeccCCCceEEec---CcEEEEEEEEEEEcCcCCCCCcCCeEEEEEEcCCCccc-------cCcccCCCEEEEEEE
Confidence            99999999999999975   69999999999999999999999999999999876521       111345789999999


Q ss_pred             eeCCCCC
Q 021785          182 KRTPSYK  188 (307)
Q Consensus       182 kk~~~~r  188 (307)
                      +|+.+.+
T Consensus       164 ~k~~~~~  170 (171)
T 1ut7_A          164 KKQSSAQ  170 (171)
T ss_dssp             ECC----
T ss_pred             EcCCCCC
Confidence            9886543

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	307
d1ut7a_	166	b.143.1.1 (A:) No apical meristem (NAM, ANAC) {Mou	2e-60

>d1ut7a_ b.143.1.1 (A:) No apical meristem (NAM, ANAC) {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 166

class: All beta proteins
fold: NAC domain
superfamily: NAC domain
family: NAC domain
domain: No apical meristem (NAM, ANAC)
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

 Score =  188 bits (478), Expect = 2e-60
 Identities = 79/170 (46%), Positives = 108/170 (63%), Gaps = 11/170 (6%)

Query: 15  DNKLQNHEEVMLP-GFRFHPTDEELVGFYLRRKVEKKPISIEIIKQADIYKYDPWDLPKV 73
             +     ++ LP GFRF+PTDEEL+  YL RK      S+++I + D+YK+DPW LP  
Sbjct: 6   IQETDPLTQLSLPPGFRFYPTDEELMVQYLCRKAAGYDFSLQLIAEIDLYKFDPWVLPNK 65

Query: 74  STVGDKEWYFFCIRGRKYRNSIRPNRVTGSGFWKATGIDKPIHSAKEPHECIGLKKSLVY 133
           +  G+KEWYFF  R RKY N  RPNRV GSG+WKATG DK I +     + +G+KK+LV+
Sbjct: 66  ALFGEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKIISTEG---QRVGIKKALVF 122

Query: 134 YRGSAGKGTKTDWMMHEFRLPPNGKITNFSNTKDIAQEAEVWTLCRIFKR 183
           Y G A KGTKT+W+MHE+RL    +          + + + W LCRI+K+
Sbjct: 123 YIGKAPKGTKTNWIMHEYRLIEPSRRNG-------STKLDDWVLCRIYKK 165

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	307
d1ut7a_	166	No apical meristem (NAM, ANAC) {Mouse-ear cress (A	100.0

>d1ut7a_ b.143.1.1 (A:) No apical meristem (NAM, ANAC) {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]}

class: All beta proteins
fold: NAC domain
superfamily: NAC domain
family: NAC domain
domain: No apical meristem (NAM, ANAC)
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=100.00  E-value=6.4e-52  Score=359.39  Aligned_cols=151  Identities=52%  Similarity=0.982  Sum_probs=127.7

Q ss_pred             CCCCCceecCChHHHHHHHHHHHHhCCCCCcCceeeccCCCCCCCCCCCccCCCCceEEEEeeeccccCCCCCCcccccC
Q 021785           24 VMLPGFRFHPTDEELVGFYLRRKVEKKPISIEIIKQADIYKYDPWDLPKVSTVGDKEWYFFCIRGRKYRNSIRPNRVTGS  103 (307)
Q Consensus        24 ~lpPGfRF~PTDeELV~~YL~~Ki~g~pl~~~~I~~~DVY~~~PwdLp~~~~~gd~ewYFFs~r~~k~~~g~R~~R~tg~  103 (307)
                      .|||||||+|||||||.|||++|+.|.|++..+|+++|||++|||+||+.+..++++||||+++.++++++.|.+|++|+
T Consensus        16 ~LPpG~RF~PTDeELv~~YL~~Ki~g~~l~~~~I~~~Dvy~~~Pw~Lp~~~~~~~~~wyFft~~~~k~~~g~r~~R~~g~   95 (166)
T d1ut7a_          16 SLPPGFRFYPTDEELMVQYLCRKAAGYDFSLQLIAEIDLYKFDPWVLPNKALFGEKEWYFFSPRDRKYPNGSRPNRVAGS   95 (166)
T ss_dssp             CCCTTEEECCCHHHHHHHTHHHHHTTCCCSSCCSEECCGGGSCGGGHHHHSSSCSSEEEEEEECCC-------CCEEETT
T ss_pred             cCCCccccCCCcHHHHHHHHHHHHcCCCCCcccceeccCCcCChhhccchhccCcceEEEEeeeccccCCCCccccccCC
Confidence            48899999999999999999999999999999999999999999999987766888999999999999999999999999


Q ss_pred             ceeeecCCCcceecCCCCceeeEEEEEEeeecCCCCCCCccCceeeeEEcCCCCCCCCCCCCccccccCCceEEEEEEee
Q 021785          104 GFWKATGIDKPIHSAKEPHECIGLKKSLVYYRGSAGKGTKTDWMMHEFRLPPNGKITNFSNTKDIAQEAEVWTLCRIFKR  183 (307)
Q Consensus       104 G~Wk~~G~~k~I~~~~~~g~~IG~Kk~L~Fy~g~~~~~~kT~W~MhEYrL~~~~~~~~~~~~~~~~~e~~~~VLCRIfkk  183 (307)
                      |+||++|++++|.+.   |.+||+|++|+||+++.+++.+|+|+||||+|.......       ...+.++|||||||+|
T Consensus        96 G~Wk~~g~~~~i~~~---g~~vG~kk~l~fy~~~~~~~~~t~W~M~EY~l~~~~~~~-------~~~~~~~~VLCrI~~K  165 (166)
T d1ut7a_          96 GYWKATGTDKIISTE---GQRVGIKKALVFYIGKAPKGTKTNWIMHEYRLIEPSRRN-------GSTKLDDWVLCRIYKK  165 (166)
T ss_dssp             EEEEEEEEEEEEEET---TEEEEEEEEEEEEESSTTSCEEEEEEEEEEEECCCC---------------CCEEEEEEEEC
T ss_pred             CEecccCCCceEecC---CcEEEEEEEEEEEecCCCCCCccCeEEEEEecCCccccc-------CccccCCEEEEEEEec
Confidence            999999999988764   789999999999999999999999999999998765322       1234678999999987


Q ss_pred             C
Q 021785          184 T  184 (307)
Q Consensus       184 ~  184 (307)
                      +
T Consensus       166 k  166 (166)
T d1ut7a_         166 Q  166 (166)
T ss_dssp             C
T ss_pred             C
Confidence            4