Citrus Sinensis ID: 021825

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------
MILIREFVRTFREKGIPCDVIWMDIDYMDGFRCFTFDKERFPDPKSLAADLHLNGFKAIWMLDPGIKHEDGYFVYDSGSKIDVWIQKADGTPFIGEVWPGPCVFPDYTQSKVRSWWGSLVKDFIYNGVDGIWNDMNEPAVFKSVTKTMPESNIHRGDDEIGGCQNHSYYHNVYGMLMARSTYEGMKLADKDKRPFVLTRAGFIGSQRYAATWTGDNVSNWEHLHMSISMVLQLGLSGQPFSGPDIGGFDGNATPRLFGRWMGIGAMFPFCRGHTESDAIDHEPWSFGEEVLFCSSIVIIAFFWFKLE
cHHHHHHHHHHHHccccccEEEcccccccccccEEccccccccHHHHHHHHHHcccEEEEEEcccccccccccccHHcccccEEEEccccccEEEEEccccccccccccHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHccccccEEEEcccccccccccEEEccccccccHHHHHHHHHHHHcccccccccccccccccccccHHHHHHHHHHccccccccccccccccccccccccHHHHHHHHHHHHHHcccccc
cHHHHHHHHHHHHccccccEEEEEHHcccccEEEEccccccccHHHHHHHHHHcccEEEEEEcccccccccccEHHHHccccEEEEcccccccccEcccccccccccccHHHHHHHHHHHHHHHHccccEEEcccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHccccccEEEEEccccccccEEEEEcccccccHHHHHHHHHHHHHcccccccccccccccccccccHHHHHHHHHHHcccHHHHccccccccccccccccHHHHHHHHHHHHHHEEEccc
MILIREFVRTFrekgipcdviwmdidymdgfrcftfdkerfpdpkslaADLHLNGFKAiwmldpgikhedgyfvydsgskiDVWIqkadgtpfigevwpgpcvfpdytqskvRSWWGSLVKDFIYNgvdgiwndmnepavfksvtktmpesnihrgddeiggcqnhsyyHNVYGMLMARSTYegmkladkdkrpfvltragfigsqryaatwtgdnvsnwEHLHMSISMVLQLglsgqpfsgpdiggfdgnatprlfgrwmgigamfpfcrghtesdaidhepwsfgeevLFCSSIVIIAFFWFKLE
MILIREFVRtfrekgipcdvIWMDIDYMDGFRCFTFDKERFPDPKSLAADLHLNGFKAIWMLDPGIKHEDGYFVYDSGSKIDVWIQKADGTPFIGEVWPGPCVFPDYTQSKVRSWWGSLVKDFIYNGVDGIWNDMNEPAVFKSVTKTMPESNIHRGDDEIGGCQNHSYYHNVYGMLMARSTYEGMKLADKDKRPFVLTRAGFIGSQRYAATWTGDNVSNWEHLHMSISMVLQLGLSGQPFSGPDIGGFDGNATPRLFGRWMGIGAMFPFCRGHTESDAIDHEPWSFGEEVLFCSSIVIIAFFWFKLE
MILIREFVRTFREKGIPCDVIWMDIDYMDGFRCFTFDKERFPDPKSLAADLHLNGFKAIWMLDPGIKHEDGYFVYDSGSKIDVWIQKADGTPFIGEVWPGPCVFPDYTQSKVRSWWGSLVKDFIYNGVDGIWNDMNEPAVFKSVTKTMPESNIHRGDDEIGGCQNHSYYHNVYGMLMARSTYEGMKLADKDKRPFVLTRAGFIGSQRYAATWTGDNVSNWEHLHMSISMVLQLGLSGQPFSGPDIGGFDGNATPRLFGRWMGIGAMFPFCRGHTESDAIDHEPWSFGEEVLFCSSIVIIAFFWFKLE
*ILIREFVRTFREKGIPCDVIWMDIDYMDGFRCFTFDKERFPDPKSLAADLHLNGFKAIWMLDPGIKHEDGYFVYDSGSKIDVWIQKADGTPFIGEVWPGPCVFPDYTQSKVRSWWGSLVKDFIYNGVDGIWNDMNEPAVFKSVTK******IHRGDDEIGGCQNHSYYHNVYGMLMARSTYEGMKLADKDKRPFVLTRAGFIGSQRYAATWTGDNVSNWEHLHMSISMVLQLGLSGQPFSGPDIGGFDGNATPRLFGRWMGIGAMFPFCRGHTESDAIDHEPWSFGEEVLFCSSIVIIAFFWFK**
*ILIREFVRTFREKGIPCDVIWMDIDYMDGFRCFTFDKERFPDPKSLAADLHLNGFKAIWMLDPGIKHEDGYFVYDSGSKIDVWIQKADGTPFIGEVWPGPCVFPDYTQSKVRSWWGSLVKDFIYNGVDGIWNDMNEPAVFKSVTKTMPESNIHRGDDEIGGCQNHSYYHNVYGMLMARSTYEGMKLADKDKRPFVLTRAGFIGSQRYAATWTGDNVSNWEHLHMSISMVLQLGLSGQPFSGPDIGGFDGNATPRLFGRWMGIGAMFPFCRGHTESDAIDHEPWSFGEEVLFCSSIVIIAFFWFKL*
MILIREFVRTFREKGIPCDVIWMDIDYMDGFRCFTFDKERFPDPKSLAADLHLNGFKAIWMLDPGIKHEDGYFVYDSGSKIDVWIQKADGTPFIGEVWPGPCVFPDYTQSKVRSWWGSLVKDFIYNGVDGIWNDMNEPAVFKSVTKTMPESNIHRGDDEIGGCQNHSYYHNVYGMLMARSTYEGMKLADKDKRPFVLTRAGFIGSQRYAATWTGDNVSNWEHLHMSISMVLQLGLSGQPFSGPDIGGFDGNATPRLFGRWMGIGAMFPFCRGHTESDAIDHEPWSFGEEVLFCSSIVIIAFFWFKLE
MILIREFVRTFREKGIPCDVIWMDIDYMDGFRCFTFDKERFPDPKSLAADLHLNGFKAIWMLDPGIKHEDGYFVYDSGSKIDVWIQKADGTPFIGEVWPGPCVFPDYTQSKVRSWWGSLVKDFIYNGVDGIWNDMNEPAVFKSVTKTMPESNIHRGDDEIGGCQNHSYYHNVYGMLMARSTYEGMKLADKDKRPFVLTRAGFIGSQRYAATWTGDNVSNWEHLHMSISMVLQLGLSGQPFSGPDIGGFDGNATPRLFGRWMGIGAMFPFCRGHTESDAIDHEPWSFGEEVLFCSSIVIIAFFWFKLE
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHi
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oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHiii
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MILIREFVRTFREKGIPCDVIWMDIDYMDGFRCFTFDKERFPDPKSLAADLHLNGFKAIWMLDPGIKHEDGYFVYDSGSKIDVWIQKADGTPFIGEVWPGPCVFPDYTQSKVRSWWGSLVKDFIYNGVDGIWNDMNEPAVFKSVTKTMPESNIHRGDDEIGGCQNHSYYHNVYGMLMARSTYEGMKLADKDKRPFVLTRAGFIGSQRYAATWTGDNVSNWEHLHMSISMVLQLGLSGQPFSGPDIGGFDGNATPRLFGRWMGIGAMFPFCRGHTESDAIDHEPWSFGEEVLFCSSIVIIAFFWFKLE
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query307 2.2.26 [Sep-21-2011]
Q9F234 787 Alpha-glucosidase 2 OS=Ba N/A no 0.918 0.358 0.503 9e-80
Q8TET4 914 Neutral alpha-glucosidase yes no 0.889 0.298 0.427 1e-58
Q9BE70 769 Neutral alpha-glucosidase N/A no 0.889 0.355 0.420 1e-57
Q4R4N7 944 Neutral alpha-glucosidase N/A no 0.885 0.288 0.402 4e-57
Q14697 944 Neutral alpha-glucosidase no no 0.885 0.288 0.399 4e-57
P79403 944 Neutral alpha-glucosidase no no 0.895 0.291 0.4 6e-57
Q8BVW0 898 Neutral alpha-glucosidase yes no 0.889 0.304 0.424 6e-57
Q8BHN3 944 Neutral alpha-glucosidase no no 0.902 0.293 0.385 8e-56
Q94502 943 Neutral alpha-glucosidase yes no 0.899 0.292 0.389 2e-55
Q6P7A9 953 Lysosomal alpha-glucosida no no 0.928 0.299 0.353 2e-51
>sp|Q9F234|AGL2_BACTQ Alpha-glucosidase 2 OS=Bacillus thermoamyloliquefaciens PE=3 SV=1 Back     alignment and function desciption
 Score =  296 bits (759), Expect = 9e-80,   Method: Compositional matrix adjust.
 Identities = 144/286 (50%), Positives = 182/286 (63%), Gaps = 4/286 (1%)

Query: 4   IREFVRTFREKGIPCDVIWMDIDYMDGFRCFTFDKERFPDPKSLAADLHLNGFKAIWMLD 63
           +RE  +TF EK IP DVI++DI YM+G+R FTFD+ RFP+ K L ADL   G + + ++D
Sbjct: 277 VREIAQTFIEKDIPLDVIYLDIHYMNGYRVFTFDRNRFPNLKQLIADLKQKGIRVVPIVD 336

Query: 64  PGIKHEDGYFVYDSGSKIDVWIQKADGTPFIGEVWPGPCVFPDYTQSKVRSWWGSLVKDF 123
           PG+K +  Y +Y  G + D + +  +G  + GEVWPG   FPD+T  KVR WWG   + +
Sbjct: 337 PGVKEDPEYVIYQEGIRHDYFCKYIEGNVYFGEVWPGKSAFPDFTNKKVRKWWGEKHQFY 396

Query: 124 IYNGVDGIWNDMNEPAVFKSVTKTMPESNIHRGDDEIGGCQNHSYYHNVYGMLMARSTYE 183
              G++GIWNDMNEP+VF   TKTM    IH  D   G  + H   HNVYG +M  +TY+
Sbjct: 397 TDLGIEGIWNDMNEPSVFNE-TKTMDVKVIHDND---GDPKTHRELHNVYGFMMGEATYK 452

Query: 184 GMKLADKDKRPFVLTRAGFIGSQRYAATWTGDNVSNWEHLHMSISMVLQLGLSGQPFSGP 243
           GMK     KRPF+LTRAGF G QRYAA WTGDN S WEHL MS+ M + LGLSG  F GP
Sbjct: 453 GMKKLLNGKRPFLLTRAGFSGIQRYAAVWTGDNRSFWEHLQMSLPMCMNLGLSGVAFCGP 512

Query: 244 DIGGFDGNATPRLFGRWMGIGAMFPFCRGHTESDAIDHEPWSFGEE 289
           D+GGF  N    L  RWM +GA  P+ R H        EPW+FGE+
Sbjct: 513 DVGGFAHNTNGELLTRWMQVGAFTPYFRNHCAIGFRRQEPWAFGEK 558

Bacillus thermoamyloliquefaciens (taxid: 1425)
EC: 3EC: .EC: 2EC: .EC: 1EC: .EC: 2EC: 0
>sp|Q8TET4|GANC_HUMAN Neutral alpha-glucosidase C OS=Homo sapiens GN=GANC PE=2 SV=3 Back     alignment and function description
>sp|Q9BE70|GANC_MACFA Neutral alpha-glucosidase C (Fragment) OS=Macaca fascicularis GN=GANC PE=2 SV=2 Back     alignment and function description
>sp|Q4R4N7|GANAB_MACFA Neutral alpha-glucosidase AB OS=Macaca fascicularis GN=GANAB PE=2 SV=1 Back     alignment and function description
>sp|Q14697|GANAB_HUMAN Neutral alpha-glucosidase AB OS=Homo sapiens GN=GANAB PE=1 SV=3 Back     alignment and function description
>sp|P79403|GANAB_PIG Neutral alpha-glucosidase AB OS=Sus scrofa GN=GANAB PE=1 SV=1 Back     alignment and function description
>sp|Q8BVW0|GANC_MOUSE Neutral alpha-glucosidase C OS=Mus musculus GN=Ganc PE=2 SV=2 Back     alignment and function description
>sp|Q8BHN3|GANAB_MOUSE Neutral alpha-glucosidase AB OS=Mus musculus GN=Ganab PE=1 SV=1 Back     alignment and function description
>sp|Q94502|GANAB_DICDI Neutral alpha-glucosidase AB OS=Dictyostelium discoideum GN=modA PE=3 SV=1 Back     alignment and function description
>sp|Q6P7A9|LYAG_RAT Lysosomal alpha-glucosidase OS=Rattus norvegicus GN=Gaa PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query307
359474648 991 PREDICTED: alpha-glucosidase 2-like [Vit 0.967 0.299 0.83 1e-153
296088485 1057 unnamed protein product [Vitis vinifera] 0.967 0.280 0.83 1e-153
297831124 988 hypothetical protein ARALYDRAFT_898886 [ 0.931 0.289 0.846 1e-148
357484583 1058 Alpha glucosidase-like protein [Medicago 0.960 0.278 0.802 1e-148
18403833 991 heteroglycan glucosidase 1 [Arabidopsis 0.960 0.297 0.818 1e-148
356508232 988 PREDICTED: alpha-glucosidase 2-like [Gly 0.960 0.298 0.802 1e-147
9294522 959 alpha glucosidase-like protein [Arabidop 0.960 0.307 0.818 1e-147
255557713 991 neutral alpha-glucosidase ab precursor, 0.960 0.297 0.818 1e-147
449456921 1058 PREDICTED: alpha-glucosidase 2-like [Cuc 0.960 0.278 0.798 1e-145
224138396 1001 predicted protein [Populus trichocarpa] 0.951 0.291 0.802 1e-145
>gi|359474648|ref|XP_002263148.2| PREDICTED: alpha-glucosidase 2-like [Vitis vinifera] Back     alignment and taxonomy information
 Score =  546 bits (1406), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 249/300 (83%), Positives = 271/300 (90%), Gaps = 3/300 (1%)

Query: 2   ILIREFVRTFREKGIPCDVIWMDIDYMDGFRCFTFDKERFPDPKSLAADLHLNGFKAIWM 61
           + + E  RTFREKGIPCDVIWMDIDYMDGFRCFTFD+ERF DPKSL  DLHLNGFKAIWM
Sbjct: 213 VRVLEVARTFREKGIPCDVIWMDIDYMDGFRCFTFDQERFSDPKSLGKDLHLNGFKAIWM 272

Query: 62  LDPGIKHEDGYFVYDSGSKIDVWIQKADGTPFIGEVWPGPCVFPDYTQSKVRSWWGSLVK 121
           LDPGIK EDGYFVYDSGS  DVWI KADGTPF+G+VWPGPCVFPD+TQSK RSWW  LVK
Sbjct: 273 LDPGIKQEDGYFVYDSGSANDVWIHKADGTPFVGKVWPGPCVFPDFTQSKARSWWACLVK 332

Query: 122 DFIYNGVDGIWNDMNEPAVFKSVTKTMPESNIHRGDDEIGGCQNHSYYHNVYGMLMARST 181
           DFI NGVDGIWNDMNEPAVFK+VTKTMPE N+HRGD E+GGCQNHS+YHNVYGMLMARST
Sbjct: 333 DFISNGVDGIWNDMNEPAVFKTVTKTMPEDNVHRGDAELGGCQNHSHYHNVYGMLMARST 392

Query: 182 YEGMKLADKDKRPFVLTRAGFIGSQRYAATWTGDNVSNWEHLHMSISMVLQLGLSGQPFS 241
           YEGMKLA+++KRPFVLTRAG+IGSQRYAATWTGDN+SNW+HLHMSISMVLQLGLSGQP S
Sbjct: 393 YEGMKLANENKRPFVLTRAGYIGSQRYAATWTGDNLSNWDHLHMSISMVLQLGLSGQPLS 452

Query: 242 GPDIGGFDGNATPRLFGRWMGIGAMFPFCRGHTESDAIDHEPWSFGEEVLFCSSIVIIAF 301
           GPDIGGF GNATPRLFGRWMG+GAMFPFCRGH+E+  +DHEPWSFGEE   C  +  +A 
Sbjct: 453 GPDIGGFAGNATPRLFGRWMGVGAMFPFCRGHSETGTVDHEPWSFGEE---CEEVCRLAL 509

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|296088485|emb|CBI37476.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|297831124|ref|XP_002883444.1| hypothetical protein ARALYDRAFT_898886 [Arabidopsis lyrata subsp. lyrata] gi|297329284|gb|EFH59703.1| hypothetical protein ARALYDRAFT_898886 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|357484583|ref|XP_003612579.1| Alpha glucosidase-like protein [Medicago truncatula] gi|355513914|gb|AES95537.1| Alpha glucosidase-like protein [Medicago truncatula] Back     alignment and taxonomy information
>gi|18403833|ref|NP_566736.1| heteroglycan glucosidase 1 [Arabidopsis thaliana] gi|186510357|ref|NP_001118685.1| heteroglycan glucosidase 1 [Arabidopsis thaliana] gi|16648903|gb|AAL24303.1| alpha glucosidase-like protein [Arabidopsis thaliana] gi|27311799|gb|AAO00865.1| Unknown protein [Arabidopsis thaliana] gi|31711788|gb|AAP68250.1| At3g23640 [Arabidopsis thaliana] gi|332643272|gb|AEE76793.1| heteroglycan glucosidase 1 [Arabidopsis thaliana] gi|332643273|gb|AEE76794.1| heteroglycan glucosidase 1 [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|356508232|ref|XP_003522863.1| PREDICTED: alpha-glucosidase 2-like [Glycine max] Back     alignment and taxonomy information
>gi|9294522|dbj|BAB02784.1| alpha glucosidase-like protein [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|255557713|ref|XP_002519886.1| neutral alpha-glucosidase ab precursor, putative [Ricinus communis] gi|223540932|gb|EEF42490.1| neutral alpha-glucosidase ab precursor, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|449456921|ref|XP_004146197.1| PREDICTED: alpha-glucosidase 2-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|224138396|ref|XP_002326592.1| predicted protein [Populus trichocarpa] gi|222833914|gb|EEE72391.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query307
TAIR|locus:2088035 991 HGL1 "heteroglycan glucosidase 0.931 0.288 0.846 7.8e-142
TAIR|locus:2163976 921 RSW3 "RADIAL SWELLING 3" [Arab 0.885 0.295 0.432 5.7e-61
WB|WBGene00009583 924 aagr-3 [Caenorhabditis elegans 0.889 0.295 0.409 8.3e-58
UNIPROTKB|Q8TET4 914 GANC "Neutral alpha-glucosidas 0.889 0.298 0.431 2.1e-56
UNIPROTKB|F1N6Y1 966 GANAB "Uncharacterized protein 0.895 0.284 0.4 2.4e-56
UNIPROTKB|J9NYZ4 738 GANC "Uncharacterized protein" 0.889 0.369 0.416 2.5e-56
UNIPROTKB|F5H6X6 847 GANAB "Neutral alpha-glucosida 0.885 0.321 0.395 2.7e-56
UNIPROTKB|E1BKJ4 916 GANC "Uncharacterized protein" 0.889 0.298 0.431 2.8e-56
UNIPROTKB|E9PKU7 852 GANAB "Neutral alpha-glucosida 0.885 0.319 0.395 3e-56
UNIPROTKB|E1BTT7 914 GANC "Uncharacterized protein" 0.889 0.298 0.406 4.6e-56
TAIR|locus:2088035 HGL1 "heteroglycan glucosidase 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1387 (493.3 bits), Expect = 7.8e-142, P = 7.8e-142
 Identities = 242/286 (84%), Positives = 261/286 (91%)

Query:     4 IREFVRTFREKGIPCDVIWMDIDYMDGFRCFTFDKERFPDPKSLAADLHLNGFKAIWMLD 63
             + E  +TFR+K IP DVIWMDIDYMDGFRCFTFDKERFPDP +LA DLH NGFKAIWMLD
Sbjct:   215 VAEIAQTFRDKKIPSDVIWMDIDYMDGFRCFTFDKERFPDPSALAKDLHSNGFKAIWMLD 274

Query:    64 PGIKHEDGYFVYDSGSKIDVWIQKADGTPFIGEVWPGPCVFPDYTQSKVRSWWGSLVKDF 123
             PGIK E+GY+VYDSGSK DVWI +ADG PF GEVWPGPCVFPDYT SK RSWW +LVK+F
Sbjct:   275 PGIKQEEGYYVYDSGSKNDVWISRADGKPFTGEVWPGPCVFPDYTNSKARSWWANLVKEF 334

Query:   124 IYNGVDGIWNDMNEPAVFKSVTKTMPESNIHRGDDEIGGCQNHSYYHNVYGMLMARSTYE 183
             + NGVDGIWNDMNEPAVFK VTKTMPE+NIH GDDE+GG QNHS+YHNVYGMLMARSTYE
Sbjct:   335 VSNGVDGIWNDMNEPAVFKVVTKTMPENNIHHGDDELGGVQNHSHYHNVYGMLMARSTYE 394

Query:   184 GMKLADKDKRPFVLTRAGFIGSQRYAATWTGDNVSNWEHLHMSISMVLQLGLSGQPFSGP 243
             GM+LADK+KRPFVLTRAGFIGSQRYAATWTGDN+SNWEHLHMSISMVLQLGLSGQP SGP
Sbjct:   395 GMELADKNKRPFVLTRAGFIGSQRYAATWTGDNLSNWEHLHMSISMVLQLGLSGQPLSGP 454

Query:   244 DIGGFDGNATPRLFGRWMGIGAMFPFCRGHTESDAIDHEPWSFGEE 289
             DIGGF GNATPRLFGRWMG+GAMFPFCRGH+E+   DHEPWSFGEE
Sbjct:   455 DIGGFAGNATPRLFGRWMGVGAMFPFCRGHSEAGTDDHEPWSFGEE 500
GO:0004553 "hydrolase activity, hydrolyzing O-glycosyl compounds" evidence=IEA;ISS
GO:0005634 "nucleus" evidence=ISM
GO:0005975 "carbohydrate metabolic process" evidence=IEA
GO:0009507 "chloroplast" evidence=IDA
TAIR|locus:2163976 RSW3 "RADIAL SWELLING 3" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
WB|WBGene00009583 aagr-3 [Caenorhabditis elegans (taxid:6239)] Back     alignment and assigned GO terms
UNIPROTKB|Q8TET4 GANC "Neutral alpha-glucosidase C" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|F1N6Y1 GANAB "Uncharacterized protein" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|J9NYZ4 GANC "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|F5H6X6 GANAB "Neutral alpha-glucosidase AB" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|E1BKJ4 GANC "Uncharacterized protein" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|E9PKU7 GANAB "Neutral alpha-glucosidase AB" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|E1BTT7 GANC "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer3.2.10.691

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
GSVIVG00003171001
SubName- Full=Chromosome chr2 scaffold_140, whole genome shotgun sequence; (795 aa)
(Vitis vinifera)
Predicted Functional Partners:
GSVIVG00003168001
SubName- Full=Chromosome chr2 scaffold_140, whole genome shotgun sequence; (237 aa)
  •     0.493

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query307
PLN02763 978 PLN02763, PLN02763, hydrolase, hydrolyzing O-glyco 0.0
cd06604339 cd06604, GH31_glucosidase_II_MalA, Alpha-glucosida 1e-177
pfam01055 436 pfam01055, Glyco_hydro_31, Glycosyl hydrolases fam 1e-124
cd06603339 cd06603, GH31_GANC_GANAB_alpha, This family includ 1e-110
cd06602339 cd06602, GH31_MGAM_SI_GAA, This family includes th 2e-96
COG1501 772 COG1501, COG1501, Alpha-glucosidases, family 31 of 1e-91
cd06600317 cd06600, GH31_MGAM-like, This family includes the 1e-90
cd06589265 cd06589, GH31, The enzymes of glycosyl hydrolase f 4e-62
cd06599317 cd06599, GH31_glycosidase_Aec37, Glycosyl hydrolas 5e-51
cd06593308 cd06593, GH31_xylosidase_YicI, YicI alpha-xylosida 2e-50
cd06598317 cd06598, GH31_transferase_CtsZ, CtsZ (cyclic tetra 3e-49
cd06591319 cd06591, GH31_xylosidase_XylS, XylS is a glycosyl 5e-48
cd06601332 cd06601, GH31_lyase_GLase, GLases (alpha-1,4-gluca 3e-46
cd06597340 cd06597, GH31_transferase_CtsY, CtsY (cyclic tetra 8e-20
PRK10658665 PRK10658, PRK10658, putative alpha-glucosidase; Pr 1e-18
cd06595292 cd06595, GH31_xylosidase_XylS-like, This family re 1e-17
cd06594317 cd06594, GH31_glucosidase_YihQ, YihQ is a bacteria 5e-17
PRK10426 635 PRK10426, PRK10426, alpha-glucosidase; Provisional 5e-17
cd06592303 cd06592, GH31_glucosidase_KIAA1161, KIAA1161 is an 1e-14
cd06596261 cd06596, GH31_CPE1046, CPE1046 is an uncharacteriz 3e-14
>gnl|CDD|215408 PLN02763, PLN02763, hydrolase, hydrolyzing O-glycosyl compounds Back     alignment and domain information 
 Score =  573 bits (1479), Expect = 0.0
 Identities = 239/287 (83%), Positives = 259/287 (90%)

Query: 4   IREFVRTFREKGIPCDVIWMDIDYMDGFRCFTFDKERFPDPKSLAADLHLNGFKAIWMLD 63
           + E  RTFREK IPCDV+WMDIDYMDGFRCFTFDKERFPDPK LA DLH  GFKAIWMLD
Sbjct: 203 VAEIARTFREKKIPCDVVWMDIDYMDGFRCFTFDKERFPDPKGLADDLHSIGFKAIWMLD 262

Query: 64  PGIKHEDGYFVYDSGSKIDVWIQKADGTPFIGEVWPGPCVFPDYTQSKVRSWWGSLVKDF 123
           PGIK E+GYFVYDSG + DVWIQ ADG PF+GEVWPGPCVFPD+T  K RSWW +LVKDF
Sbjct: 263 PGIKAEEGYFVYDSGCENDVWIQTADGKPFVGEVWPGPCVFPDFTNKKTRSWWANLVKDF 322

Query: 124 IYNGVDGIWNDMNEPAVFKSVTKTMPESNIHRGDDEIGGCQNHSYYHNVYGMLMARSTYE 183
           + NGVDGIWNDMNEPAVFK+VTKTMPE+NIHRGD+E+GG QNHS+YHNVYGMLMARSTYE
Sbjct: 323 VSNGVDGIWNDMNEPAVFKTVTKTMPETNIHRGDEELGGVQNHSHYHNVYGMLMARSTYE 382

Query: 184 GMKLADKDKRPFVLTRAGFIGSQRYAATWTGDNVSNWEHLHMSISMVLQLGLSGQPFSGP 243
           GM LA+K+KRPFVLTRAGFIGSQRYAATWTGDN+SNWEHLHMSI MVLQLGLSGQP SGP
Sbjct: 383 GMLLANKNKRPFVLTRAGFIGSQRYAATWTGDNLSNWEHLHMSIPMVLQLGLSGQPLSGP 442

Query: 244 DIGGFDGNATPRLFGRWMGIGAMFPFCRGHTESDAIDHEPWSFGEEV 290
           DIGGF G+ATP+LFGRWMG+GAMFPF RGH+E   IDHEPWSFGEE 
Sbjct: 443 DIGGFAGDATPKLFGRWMGVGAMFPFARGHSEQGTIDHEPWSFGEEC 489

Length = 978
>gnl|CDD|133135 cd06604, GH31_glucosidase_II_MalA, Alpha-glucosidase II (alpha-D-glucoside glucohydrolase) is a glycosyl hydrolase family 31 (GH31) enzyme, found in bacteria and plants, which has exo-alpha-1,4-glucosidase and oligo-1,6-glucosidase activities Back     alignment and domain information
>gnl|CDD|216268 pfam01055, Glyco_hydro_31, Glycosyl hydrolases family 31 Back     alignment and domain information
>gnl|CDD|133134 cd06603, GH31_GANC_GANAB_alpha, This family includes the closely related glycosyl hydrolase family 31 (GH31) isozymes, neutral alpha-glucosidase C (GANC) and the alpha subunit of heterodimeric neutral alpha-glucosidase AB (GANAB) Back     alignment and domain information
>gnl|CDD|133133 cd06602, GH31_MGAM_SI_GAA, This family includes the following three closely related glycosyl hydrolase family 31 (GH31) enzymes: maltase-glucoamylase (MGAM), sucrase-isomaltase (SI), and lysosomal acid alpha-glucosidase (GAA), also known as acid-maltase Back     alignment and domain information
>gnl|CDD|224418 COG1501, COG1501, Alpha-glucosidases, family 31 of glycosyl hydrolases [Carbohydrate transport and metabolism] Back     alignment and domain information
>gnl|CDD|133131 cd06600, GH31_MGAM-like, This family includes the following closely related glycosyl hydrolase family 31 (GH31) enzymes: maltase-glucoamylase (MGAM), sucrase-isomaltase (SI), lysosomal acid alpha-glucosidase (GAA), neutral alpha-glucosidase C (GANC), the alpha subunit of neutral alpha-glucosidase AB (GANAB), and alpha-glucosidase II Back     alignment and domain information
>gnl|CDD|133121 cd06589, GH31, The enzymes of glycosyl hydrolase family 31 (GH31) occur in prokaryotes, eukaryotes, and archaea with a wide range of hydrolytic activities, including alpha-glucosidase (glucoamylase and sucrase-isomaltase), alpha-xylosidase, 6-alpha-glucosyltransferase, 3-alpha-isomaltosyltransferase and alpha-1,4-glucan lyase Back     alignment and domain information
>gnl|CDD|133130 cd06599, GH31_glycosidase_Aec37, Glycosyl hydrolase family 31 (GH31) domain of a bacterial protein family represented by Escherichia coli protein Aec37 Back     alignment and domain information
>gnl|CDD|133124 cd06593, GH31_xylosidase_YicI, YicI alpha-xylosidase is a glycosyl hydrolase family 31 (GH31) enzyme that catalyzes the release of an alpha-xylosyl residue from the non-reducing end of alpha-xyloside substrates such as alpha-xylosyl fluoride and isoprimeverose Back     alignment and domain information
>gnl|CDD|133129 cd06598, GH31_transferase_CtsZ, CtsZ (cyclic tetrasaccharide-synthesizing enzyme Z) is a bacterial 6-alpha-glucosyltransferase, first identified in Arthrobacter globiformis, that produces cyclic tetrasaccharides together with a closely related enzyme CtsY Back     alignment and domain information
>gnl|CDD|133122 cd06591, GH31_xylosidase_XylS, XylS is a glycosyl hydrolase family 31 (GH31) alpha-xylosidase found in prokaryotes, eukaryotes, and archaea, that catalyzes the release of alpha-xylose from the non-reducing terminal side of the alpha-xyloside substrate Back     alignment and domain information
>gnl|CDD|133132 cd06601, GH31_lyase_GLase, GLases (alpha-1,4-glucan lyases) are glycosyl hydrolase family 31 (GH31) enzymes that degrade alpha-1,4-glucans and maltooligosaccharides via a nonhydrolytic pathway to yield 1,5-D-anhydrofructose from the nonreducing end Back     alignment and domain information
>gnl|CDD|133128 cd06597, GH31_transferase_CtsY, CtsY (cyclic tetrasaccharide-synthesizing enzyme Y) is a bacterial 3-alpha-isomaltosyltransferase, first identified in Arthrobacter globiformis, that produces cyclic tetrasaccharides together with a closely related enzyme CtsZ Back     alignment and domain information
>gnl|CDD|236731 PRK10658, PRK10658, putative alpha-glucosidase; Provisional Back     alignment and domain information
>gnl|CDD|133126 cd06595, GH31_xylosidase_XylS-like, This family represents an uncharacterized glycosyl hydrolase family 31 (GH31) enzyme found in bacteria and eukaryotes that is related to the XylS xylosidase of Sulfolobus solfataricus Back     alignment and domain information
>gnl|CDD|133125 cd06594, GH31_glucosidase_YihQ, YihQ is a bacterial alpha-glucosidase with a conserved glycosyl hydrolase family 31 (GH31) domain that catalyzes the release of an alpha-glucosyl residue from the non-reducing end of alpha-glucoside substrates such as alpha-glucosyl fluoride Back     alignment and domain information
>gnl|CDD|236691 PRK10426, PRK10426, alpha-glucosidase; Provisional Back     alignment and domain information
>gnl|CDD|133123 cd06592, GH31_glucosidase_KIAA1161, KIAA1161 is an uncharacterized Homo sapiens protein with a glycosyl hydrolase family 31 (GH31) domain that is homologous to the Escherichia coli YihQ glucosidase Back     alignment and domain information
>gnl|CDD|133127 cd06596, GH31_CPE1046, CPE1046 is an uncharacterized Clostridium perfringens protein with a glycosyl hydrolase family 31 (GH31) domain Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 307
PLN02763 978 hydrolase, hydrolyzing O-glycosyl compounds 100.0
cd06604339 GH31_glucosidase_II_MalA Alpha-glucosidase II (alp 100.0
cd06600317 GH31_MGAM-like This family includes the following 100.0
cd06603339 GH31_GANC_GANAB_alpha This family includes the clo 100.0
cd06598317 GH31_transferase_CtsZ CtsZ (cyclic tetrasaccharide 100.0
cd06602339 GH31_MGAM_SI_GAA This family includes the followin 100.0
cd06593308 GH31_xylosidase_YicI YicI alpha-xylosidase is a gl 100.0
KOG1066 915 consensus Glucosidase II catalytic (alpha) subunit 100.0
cd06601332 GH31_lyase_GLase GLases (alpha-1,4-glucan lyases) 100.0
PRK10658665 putative alpha-glucosidase; Provisional 100.0
cd06591319 GH31_xylosidase_XylS XylS is a glycosyl hydrolase 100.0
COG1501 772 Alpha-glucosidases, family 31 of glycosyl hydrolas 100.0
cd06599317 GH31_glycosidase_Aec37 Glycosyl hydrolase family 3 100.0
cd06594317 GH31_glucosidase_YihQ YihQ is a bacterial alpha-gl 100.0
PF01055441 Glyco_hydro_31: Glycosyl hydrolases family 31 ; In 100.0
cd06597340 GH31_transferase_CtsY CtsY (cyclic tetrasaccharide 100.0
PRK10426 635 alpha-glucosidase; Provisional 100.0
cd06592303 GH31_glucosidase_KIAA1161 KIAA1161 is an uncharact 100.0
cd06595292 GH31_xylosidase_XylS-like This family represents a 100.0
cd06589265 GH31 The enzymes of glycosyl hydrolase family 31 ( 100.0
KOG1065 805 consensus Maltase glucoamylase and related hydrola 100.0
cd06596261 GH31_CPE1046 CPE1046 is an uncharacterized Clostri 100.0
PF02065394 Melibiase: Melibiase; InterPro: IPR000111 O-Glycos 99.73
PLN03231357 putative alpha-galactosidase; Provisional 99.43
PLN02229427 alpha-galactosidase 99.27
PLN02692412 alpha-galactosidase 99.26
PLN02808386 alpha-galactosidase 99.23
COG3345687 GalA Alpha-galactosidase [Carbohydrate transport a 99.22
PLN02899 633 alpha-galactosidase 99.17
KOG2366414 consensus Alpha-D-galactosidase (melibiase) [Carbo 98.25
PLN02355 758 probable galactinol--sucrose galactosyltransferase 97.67
PLN02219 775 probable galactinol--sucrose galactosyltransferase 97.57
PLN02711 777 Probable galactinol--sucrose galactosyltransferase 97.56
TIGR02456 539 treS_nterm trehalose synthase. Trehalose synthase 97.55
PLN02684 750 Probable galactinol--sucrose galactosyltransferase 97.42
PF02638311 DUF187: Glycosyl hydrolase like GH101; InterPro: I 97.39
PF14871132 GHL6: Hypothetical glycosyl hydrolase 6 97.37
PF00128316 Alpha-amylase: Alpha amylase, catalytic domain; In 97.29
PRK10785598 maltodextrin glucosidase; Provisional 97.26
PRK10933 551 trehalose-6-phosphate hydrolase; Provisional 97.25
PLN00196428 alpha-amylase; Provisional 97.23
TIGR01515 613 branching_enzym alpha-1,4-glucan:alpha-1,4-glucan 97.23
TIGR02403 543 trehalose_treC alpha,alpha-phosphotrehalase. Treha 97.2
PF05691 747 Raffinose_syn: Raffinose synthase or seed imbibiti 97.14
TIGR02104 605 pulA_typeI pullulanase, type I. Pullulan is an unu 96.99
PF13200316 DUF4015: Putative glycosyl hydrolase domain 96.96
COG1649418 Uncharacterized protein conserved in bacteria [Fun 96.95
PRK03705 658 glycogen debranching enzyme; Provisional 96.8
PRK09441479 cytoplasmic alpha-amylase; Reviewed 96.56
PRK14510 1221 putative bifunctional 4-alpha-glucanotransferase/g 96.45
PRK12313 633 glycogen branching enzyme; Provisional 96.37
TIGR02100 688 glgX_debranch glycogen debranching enzyme GlgX. Th 96.35
PLN02361401 alpha-amylase 96.33
TIGR01370315 cysRS possible cysteinyl-tRNA synthetase, Methanoc 96.16
PLN02960 897 alpha-amylase 96.12
PRK14706 639 glycogen branching enzyme; Provisional 96.08
COG0366 505 AmyA Glycosidases [Carbohydrate transport and meta 96.06
PRK14705 1224 glycogen branching enzyme; Provisional 96.05
TIGR02402 542 trehalose_TreZ malto-oligosyltrehalose trehalohydr 96.04
PLN02784894 alpha-amylase 95.97
PRK12568 730 glycogen branching enzyme; Provisional 95.92
PLN02447 758 1,4-alpha-glucan-branching enzyme 95.86
PRK05402 726 glycogen branching enzyme; Provisional 95.85
TIGR02102 1111 pullulan_Gpos pullulanase, extracellular, Gram-pos 95.84
PLN03244 872 alpha-amylase; Provisional 95.63
COG1523 697 PulA Type II secretory pathway, pullulanase PulA a 95.58
KOG0471 545 consensus Alpha-amylase [Carbohydrate transport an 95.51
PRK09505683 malS alpha-amylase; Reviewed 95.43
COG0296 628 GlgB 1,4-alpha-glucan branching enzyme [Carbohydra 95.16
TIGR02103 898 pullul_strch alpha-1,6-glucosidases, pullulanase-t 95.08
PF10566273 Glyco_hydro_97: Glycoside hydrolase 97 ; InterPro: 94.61
PF13199 559 Glyco_hydro_66: Glycosyl hydrolase family 66; PDB: 94.29
COG2342300 Predicted extracellular endo alpha-1,4 polygalacto 94.09
PRK13840 495 sucrose phosphorylase; Provisional 93.9
PLN02877 970 alpha-amylase/limit dextrinase 93.58
KOG0470 757 consensus 1,4-alpha-glucan branching enzyme/starch 93.21
PF02449374 Glyco_hydro_42: Beta-galactosidase; InterPro: IPR0 90.01
TIGR03852 470 sucrose_gtfA sucrose phosphorylase. In the forward 88.11
PLN02982 865 galactinol-raffinose galactosyltransferase/ghydrol 87.7
smart00642166 Aamy Alpha-amylase domain. 87.17
TIGR02455 688 TreS_stutzeri trehalose synthase, Pseudomonas stut 85.88
PF01120346 Alpha_L_fucos: Alpha-L-fucosidase; InterPro: IPR00 85.47
PF1488579 GHL15: Hypothetical glycosyl hydrolase family 15 82.85
PRK14582671 pgaB outer membrane N-deacetylase; Provisional 82.59
PF01301319 Glyco_hydro_35: Glycosyl hydrolases family 35; Int 81.36
cd0488372 ACT_AcuB C-terminal ACT domain of the Bacillus sub 80.17
COG4868 493 Uncharacterized protein conserved in bacteria [Fun 80.12
>PLN02763 hydrolase, hydrolyzing O-glycosyl compounds Back     alignment and domain information 
Probab=100.00  E-value=2.1e-83  Score=642.14  Aligned_cols=305  Identities=79%  Similarity=1.426  Sum_probs=291.8

Q ss_pred             hHHHHHHHHHHHcCCCcceEEecccccCCcceeeecCCCCCChHHHHHHHHHCCCeEEeecCCccccCCCcccccccccc
Q 021825            2 ILIREFVRTFREKGIPCDVIWMDIDYMDGFRCFTFDKERFPDPKSLAADLHLNGFKAIWMLDPGIKHEDGYFVYDSGSKI   81 (307)
Q Consensus         2 ~~v~~~~~~~~~~~iP~d~i~lD~~w~~~~~~f~~d~~~FPd~~~~~~~l~~~G~k~~~~~~P~i~~~~~~~~~~~~~~~   81 (307)
                      ++|++++++||+++||||+||+|++|++++++|+||+++||||++|+++||++|+|++++++|.|..+++|++|+++.++
T Consensus       201 ~eV~eva~~fre~~IP~DvIwlDidYm~g~~~FTwD~~rFPdP~~mv~~Lh~~G~kvv~iidPgI~~d~gY~~y~eg~~~  280 (978)
T PLN02763        201 KRVAEIARTFREKKIPCDVVWMDIDYMDGFRCFTFDKERFPDPKGLADDLHSIGFKAIWMLDPGIKAEEGYFVYDSGCEN  280 (978)
T ss_pred             HHHHHHHHHHHHcCCCceEEEEehhhhcCCCceeECcccCCCHHHHHHHHHHCCCEEEEEEcCCCccCCCCHHHHhHhhc
Confidence            68999999999999999999999999999999999999999999999999999999999999999998889999999999


Q ss_pred             ceeEEcCCCCceeeeecCCCccCCCCCChHHHHHHHHHHHHHhhcCccEEEecCCCCcccCCCCCCCCCCcccCCCCCCC
Q 021825           82 DVWIQKADGTPFIGEVWPGPCVFPDYTQSKVRSWWGSLVKDFIYNGVDGIWNDMNEPAVFKSVTKTMPESNIHRGDDEIG  161 (307)
Q Consensus        82 ~~~~~~~~g~~~~~~~w~g~~~~~Dftnp~a~~ww~~~l~~l~~~Gvdg~w~D~~e~~~~~~~~~~~p~~~~~~~~~~~~  161 (307)
                      ++|+++++|+++++.+|||.++++|||||+|++||.++++++++.||||||+|+|||+.|+...+++|.+..|.+....+
T Consensus       281 ~~fvk~~~G~~y~G~vWpG~~~fpDFTnP~ar~WW~~~~k~l~d~GVDG~W~DmnEPa~f~~~~~t~P~~~~h~g~~~~g  360 (978)
T PLN02763        281 DVWIQTADGKPFVGEVWPGPCVFPDFTNKKTRSWWANLVKDFVSNGVDGIWNDMNEPAVFKTVTKTMPETNIHRGDEELG  360 (978)
T ss_pred             CeeEECCCCCeeEeeecCCCccccCCCCHHHHHHHHHHHHHHhcCCCcEEEccCCCCccccCCcCCCCccccccCCcccC
Confidence            99999999999999999999999999999999999999999999999999999999999987777899888887765556


Q ss_pred             CccccccccchhHHHHHHHHHHHHHhhcCCCCcEEEEccccCCCCcceeeecCCCCCCchHHHHHHHHHHHhcccCCCcc
Q 021825          162 GCQNHSYYHNVYGMLMARSTYEGMKLADKDKRPFVLTRAGFIGSQRYAATWTGDNVSNWEHLHMSISMVLQLGLSGQPFS  241 (307)
Q Consensus       162 ~~~~~~~~hn~y~~~~~~~~~~~~~~~~~~~r~~~~sRs~~~G~qr~~~~w~GD~~s~W~~L~~~i~~~l~~~l~G~p~~  241 (307)
                      +..+|..+||+|++++++++||++++..+++|||++|||+|+|+|||+++|+||+.++|+.|+.+|+++|++||||+|||
T Consensus       361 G~~~h~~~HNlYgll~akatyEgl~~~~~~kRPFilTRSgfaGsQRYaa~WtGDn~SsWe~L~~sI~~~LnlgLSGipf~  440 (978)
T PLN02763        361 GVQNHSHYHNVYGMLMARSTYEGMLLANKNKRPFVLTRAGFIGSQRYAATWTGDNLSNWEHLHMSIPMVLQLGLSGQPLS  440 (978)
T ss_pred             CccCHHHHhhhhHHHHHHHHHHHHHHhCCCCCcEEEEccccCcCCCCceEECCCccCCHHHHHHHHHHHHHHHhcCCccc
Confidence            66678999999999999999999998888999999999999999999999999999999999999999999999999999


Q ss_pred             cccCCCCCCCCChhHHHHHHHhhhhcccccccCCCCCCCCCccccChhhHHHHHHHH-----HHhhhhhc
Q 021825          242 GPDIGGFDGNATPRLFGRWMGIGAMFPFCRGHTESDAIDHEPWSFGEEVLFCSSIVI-----IAFFWFKL  306 (307)
Q Consensus       242 g~DigGf~~~~~~EL~~RW~Q~~af~P~~r~h~~~~~~~~~Pw~~~~~~~~~~r~~i-----~l~~~~~~  306 (307)
                      |+|||||.+++++|||+||+|+|+|+|+||+|+..++.++|||.|++++++++|++|     +|||+|||
T Consensus       441 G~DIGGF~G~~~~ELy~RW~Q~GaF~P~fR~Hs~~gt~~qEPW~fgeev~~i~R~ai~LRYrLLPYiYSL  510 (978)
T PLN02763        441 GPDIGGFAGDATPKLFGRWMGVGAMFPFARGHSEQGTIDHEPWSFGEECEEVCRLALKRRYRLLPHFYTL  510 (978)
T ss_pred             ccccCCCCCCCCHHHHHHHHHHhhhhHHhhhccCCCCCCcCCeecChHHHHHHHHHHHHHHHHHHHHHHH
Confidence            999999999999999999999999999999999887789999999999999999998     77899986

>cd06604 GH31_glucosidase_II_MalA Alpha-glucosidase II (alpha-D-glucoside glucohydrolase) is a glycosyl hydrolase family 31 (GH31) enzyme, found in bacteria and plants, which has exo-alpha-1,4-glucosidase and oligo-1,6-glucosidase activities Back     alignment and domain information
>cd06600 GH31_MGAM-like This family includes the following closely related glycosyl hydrolase family 31 (GH31) enzymes: maltase-glucoamylase (MGAM), sucrase-isomaltase (SI), lysosomal acid alpha-glucosidase (GAA), neutral alpha-glucosidase C (GANC), the alpha subunit of neutral alpha-glucosidase AB (GANAB), and alpha-glucosidase II Back     alignment and domain information
>cd06603 GH31_GANC_GANAB_alpha This family includes the closely related glycosyl hydrolase family 31 (GH31) isozymes, neutral alpha-glucosidase C (GANC) and the alpha subunit of heterodimeric neutral alpha-glucosidase AB (GANAB) Back     alignment and domain information
>cd06598 GH31_transferase_CtsZ CtsZ (cyclic tetrasaccharide-synthesizing enzyme Z) is a bacterial 6-alpha-glucosyltransferase, first identified in Arthrobacter globiformis, that produces cyclic tetrasaccharides together with a closely related enzyme CtsY Back     alignment and domain information
>cd06602 GH31_MGAM_SI_GAA This family includes the following three closely related glycosyl hydrolase family 31 (GH31) enzymes: maltase-glucoamylase (MGAM), sucrase-isomaltase (SI), and lysosomal acid alpha-glucosidase (GAA), also known as acid-maltase Back     alignment and domain information
>cd06593 GH31_xylosidase_YicI YicI alpha-xylosidase is a glycosyl hydrolase family 31 (GH31) enzyme that catalyzes the release of an alpha-xylosyl residue from the non-reducing end of alpha-xyloside substrates such as alpha-xylosyl fluoride and isoprimeverose Back     alignment and domain information
>KOG1066 consensus Glucosidase II catalytic (alpha) subunit and related enzymes, glycosyl hydrolase family 31 [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis; Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>cd06601 GH31_lyase_GLase GLases (alpha-1,4-glucan lyases) are glycosyl hydrolase family 31 (GH31) enzymes that degrade alpha-1,4-glucans and maltooligosaccharides via a nonhydrolytic pathway to yield 1,5-D-anhydrofructose from the nonreducing end Back     alignment and domain information
>PRK10658 putative alpha-glucosidase; Provisional Back     alignment and domain information
>cd06591 GH31_xylosidase_XylS XylS is a glycosyl hydrolase family 31 (GH31) alpha-xylosidase found in prokaryotes, eukaryotes, and archaea, that catalyzes the release of alpha-xylose from the non-reducing terminal side of the alpha-xyloside substrate Back     alignment and domain information
>COG1501 Alpha-glucosidases, family 31 of glycosyl hydrolases [Carbohydrate transport and metabolism] Back     alignment and domain information
>cd06599 GH31_glycosidase_Aec37 Glycosyl hydrolase family 31 (GH31) domain of a bacterial protein family represented by Escherichia coli protein Aec37 Back     alignment and domain information
>cd06594 GH31_glucosidase_YihQ YihQ is a bacterial alpha-glucosidase with a conserved glycosyl hydrolase family 31 (GH31) domain that catalyzes the release of an alpha-glucosyl residue from the non-reducing end of alpha-glucoside substrates such as alpha-glucosyl fluoride Back     alignment and domain information
>PF01055 Glyco_hydro_31: Glycosyl hydrolases family 31 ; InterPro: IPR000322 O-Glycosyl hydrolases 3 Back     alignment and domain information
>cd06597 GH31_transferase_CtsY CtsY (cyclic tetrasaccharide-synthesizing enzyme Y) is a bacterial 3-alpha-isomaltosyltransferase, first identified in Arthrobacter globiformis, that produces cyclic tetrasaccharides together with a closely related enzyme CtsZ Back     alignment and domain information
>PRK10426 alpha-glucosidase; Provisional Back     alignment and domain information
>cd06592 GH31_glucosidase_KIAA1161 KIAA1161 is an uncharacterized Homo sapiens protein with a glycosyl hydrolase family 31 (GH31) domain that is homologous to the Escherichia coli YihQ glucosidase Back     alignment and domain information
>cd06595 GH31_xylosidase_XylS-like This family represents an uncharacterized glycosyl hydrolase family 31 (GH31) enzyme found in bacteria and eukaryotes that is related to the XylS xylosidase of Sulfolobus solfataricus Back     alignment and domain information
>cd06589 GH31 The enzymes of glycosyl hydrolase family 31 (GH31) occur in prokaryotes, eukaryotes, and archaea with a wide range of hydrolytic activities, including alpha-glucosidase (glucoamylase and sucrase-isomaltase), alpha-xylosidase, 6-alpha-glucosyltransferase, 3-alpha-isomaltosyltransferase and alpha-1,4-glucan lyase Back     alignment and domain information
>KOG1065 consensus Maltase glucoamylase and related hydrolases, glycosyl hydrolase family 31 [Carbohydrate transport and metabolism] Back     alignment and domain information
>cd06596 GH31_CPE1046 CPE1046 is an uncharacterized Clostridium perfringens protein with a glycosyl hydrolase family 31 (GH31) domain Back     alignment and domain information
>PF02065 Melibiase: Melibiase; InterPro: IPR000111 O-Glycosyl hydrolases 3 Back     alignment and domain information
>PLN03231 putative alpha-galactosidase; Provisional Back     alignment and domain information
>PLN02229 alpha-galactosidase Back     alignment and domain information
>PLN02692 alpha-galactosidase Back     alignment and domain information
>PLN02808 alpha-galactosidase Back     alignment and domain information
>COG3345 GalA Alpha-galactosidase [Carbohydrate transport and metabolism] Back     alignment and domain information
>PLN02899 alpha-galactosidase Back     alignment and domain information
>KOG2366 consensus Alpha-D-galactosidase (melibiase) [Carbohydrate transport and metabolism] Back     alignment and domain information
>PLN02355 probable galactinol--sucrose galactosyltransferase 1 Back     alignment and domain information
>PLN02219 probable galactinol--sucrose galactosyltransferase 2 Back     alignment and domain information
>PLN02711 Probable galactinol--sucrose galactosyltransferase Back     alignment and domain information
>TIGR02456 treS_nterm trehalose synthase Back     alignment and domain information
>PLN02684 Probable galactinol--sucrose galactosyltransferase Back     alignment and domain information
>PF02638 DUF187: Glycosyl hydrolase like GH101; InterPro: IPR003790 This entry describes proteins of unknown function Back     alignment and domain information
>PF14871 GHL6: Hypothetical glycosyl hydrolase 6 Back     alignment and domain information
>PF00128 Alpha-amylase: Alpha amylase, catalytic domain; InterPro: IPR006047 O-Glycosyl hydrolases 3 Back     alignment and domain information
>PRK10785 maltodextrin glucosidase; Provisional Back     alignment and domain information
>PRK10933 trehalose-6-phosphate hydrolase; Provisional Back     alignment and domain information
>PLN00196 alpha-amylase; Provisional Back     alignment and domain information
>TIGR01515 branching_enzym alpha-1,4-glucan:alpha-1,4-glucan 6-glycosyltransferase Back     alignment and domain information
>TIGR02403 trehalose_treC alpha,alpha-phosphotrehalase Back     alignment and domain information
>PF05691 Raffinose_syn: Raffinose synthase or seed imbibition protein Sip1; InterPro: IPR008811 This family consists of several raffinose synthase proteins, also known as seed imbibition (Sip1) proteins Back     alignment and domain information
>TIGR02104 pulA_typeI pullulanase, type I Back     alignment and domain information
>PF13200 DUF4015: Putative glycosyl hydrolase domain Back     alignment and domain information
>COG1649 Uncharacterized protein conserved in bacteria [Function unknown] Back     alignment and domain information
>PRK03705 glycogen debranching enzyme; Provisional Back     alignment and domain information
>PRK09441 cytoplasmic alpha-amylase; Reviewed Back     alignment and domain information
>PRK14510 putative bifunctional 4-alpha-glucanotransferase/glycogen debranching enzyme; Provisional Back     alignment and domain information
>PRK12313 glycogen branching enzyme; Provisional Back     alignment and domain information
>TIGR02100 glgX_debranch glycogen debranching enzyme GlgX Back     alignment and domain information
>PLN02361 alpha-amylase Back     alignment and domain information
>TIGR01370 cysRS possible cysteinyl-tRNA synthetase, Methanococcus type Back     alignment and domain information
>PLN02960 alpha-amylase Back     alignment and domain information
>PRK14706 glycogen branching enzyme; Provisional Back     alignment and domain information
>COG0366 AmyA Glycosidases [Carbohydrate transport and metabolism] Back     alignment and domain information
>PRK14705 glycogen branching enzyme; Provisional Back     alignment and domain information
>TIGR02402 trehalose_TreZ malto-oligosyltrehalose trehalohydrolase Back     alignment and domain information
>PLN02784 alpha-amylase Back     alignment and domain information
>PRK12568 glycogen branching enzyme; Provisional Back     alignment and domain information
>PLN02447 1,4-alpha-glucan-branching enzyme Back     alignment and domain information
>PRK05402 glycogen branching enzyme; Provisional Back     alignment and domain information
>TIGR02102 pullulan_Gpos pullulanase, extracellular, Gram-positive Back     alignment and domain information
>PLN03244 alpha-amylase; Provisional Back     alignment and domain information
>COG1523 PulA Type II secretory pathway, pullulanase PulA and related glycosidases [Carbohydrate transport and metabolism] Back     alignment and domain information
>KOG0471 consensus Alpha-amylase [Carbohydrate transport and metabolism] Back     alignment and domain information
>PRK09505 malS alpha-amylase; Reviewed Back     alignment and domain information
>COG0296 GlgB 1,4-alpha-glucan branching enzyme [Carbohydrate transport and metabolism] Back     alignment and domain information
>TIGR02103 pullul_strch alpha-1,6-glucosidases, pullulanase-type Back     alignment and domain information
>PF10566 Glyco_hydro_97: Glycoside hydrolase 97 ; InterPro: IPR019563 O-Glycosyl hydrolases 3 Back     alignment and domain information
>PF13199 Glyco_hydro_66: Glycosyl hydrolase family 66; PDB: 3VMO_A 3VMN_A 3VMP_A Back     alignment and domain information
>COG2342 Predicted extracellular endo alpha-1,4 polygalactosaminidase or related polysaccharide hydrolase [Carbohydrate transport and metabolism] Back     alignment and domain information
>PRK13840 sucrose phosphorylase; Provisional Back     alignment and domain information
>PLN02877 alpha-amylase/limit dextrinase Back     alignment and domain information
>KOG0470 consensus 1,4-alpha-glucan branching enzyme/starch branching enzyme II [Carbohydrate transport and metabolism] Back     alignment and domain information
>PF02449 Glyco_hydro_42: Beta-galactosidase; InterPro: IPR013529 O-Glycosyl hydrolases 3 Back     alignment and domain information
>TIGR03852 sucrose_gtfA sucrose phosphorylase Back     alignment and domain information
>PLN02982 galactinol-raffinose galactosyltransferase/ghydrolase, hydrolyzing O-glycosyl compounds Back     alignment and domain information
>smart00642 Aamy Alpha-amylase domain Back     alignment and domain information
>TIGR02455 TreS_stutzeri trehalose synthase, Pseudomonas stutzeri type Back     alignment and domain information
>PF01120 Alpha_L_fucos: Alpha-L-fucosidase; InterPro: IPR000933 O-Glycosyl hydrolases 3 Back     alignment and domain information
>PF14885 GHL15: Hypothetical glycosyl hydrolase family 15 Back     alignment and domain information
>PRK14582 pgaB outer membrane N-deacetylase; Provisional Back     alignment and domain information
>PF01301 Glyco_hydro_35: Glycosyl hydrolases family 35; InterPro: IPR001944 O-Glycosyl hydrolases 3 Back     alignment and domain information
>cd04883 ACT_AcuB C-terminal ACT domain of the Bacillus subtilis acetoin utilization protein, AcuB Back     alignment and domain information
>COG4868 Uncharacterized protein conserved in bacteria [Function unknown] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query307
3l4t_A 875 Crystal Complex Of N-Terminal Human Maltase-Glucoam 2e-50
2qly_A 870 Crystral Structure Of The N-Terminal Subunit Of Hum 2e-50
2g3m_A 693 Crystal Structure Of The Sulfolobus Solfataricus Al 4e-49
3lpo_A 898 Crystal Structure Of The N-Terminal Domain Of Sucra 2e-48
3pha_A 667 The Crystal Structure Of The W169y Mutant Of Alpha- 2e-47
3nuk_A 666 The Crystal Structure Of The W169y Mutant Of Alpha- 2e-47
3m46_A 666 The Crystal Structure Of The D73a Mutant Of Glycosi 2e-47
3nsx_A 666 The Crystal Structure Of The The Crystal Structure 1e-46
3m6d_A 666 The Crystal Structure Of The D307a Mutant Of Glycos 1e-46
3n04_A 666 The Crystal Structure Of The Alpha-Glucosidase (Fam 1e-37
3ton_A 908 Crystral Structure Of The C-Terminal Subunit Of Hum 3e-27
4b9y_A 817 Crystal Structure Of Apo Agd31b, Alpha-transglucosy 1e-24
1xsi_A 778 Structure Of A Family 31 Alpha Glycosidase Length = 7e-18
2f2h_A 773 Structure Of The Yici Thiosugar Michaelis Complex L 8e-18
2x2h_A 1027 Crystal Structure Of The Gracilariopsis Lemaneiform 3e-17
1we5_A 772 Crystal Structure Of Alpha-Xylosidase From Escheric 1e-16
2xvg_A 1020 Crystal Structure Of Alpha-Xylosidase (Gh31) From C 1e-14
>pdb|3L4T|A Chain A, Crystal Complex Of N-Terminal Human Maltase-Glucoamylase With Bj2661 Length = 875 Back     alignment and structure 
Iteration: 1

 Score =  195 bits (496), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 121/317 (38%), Positives = 156/317 (49%), Gaps = 26/317 (8%)
Query: 4   IREFVRTFREKGIPCDVIWMDIDYMDGFRCFTFDKERFPDPKSLAADLHLNGFKAIWMLD 63
           +RE V   R   +P DV   DIDYMD  R FT+D   F        +LH NG K + ++D
Sbjct: 307 MREVVERNRAAQLPYDVQHADIDYMDERRDFTYDSVDFKGFPEFVNELHNNGQKLVIIVD 366
Query: 64  PGIKHEDG----YFVYDSGSKIDVWIQKADG-TPFIGEVWPGPCVFPDYTQSKVRSWWGS 118
           P I +       Y  YD GS + +W+  +DG TP IGEVWPG  VFPDYT      WW  
Sbjct: 367 PAISNNSSSSKPYGPYDRGSDMKIWVNSSDGVTPLIGEVWPGQTVFPDYTNPNCAVWWTK 426
Query: 119 LVKDFIYNGV--DGIWNDMNEPAVFKSVTKTMPESNIHRGD------------------D 158
             + F +N V  DGIW DMNE + F   + +   +N                       D
Sbjct: 427 EFELF-HNQVEFDGIWIDMNEVSNFVDGSVSGCSTNNLNNPPFTPRILDGYLFCKTLCMD 485
Query: 159 EIGGCQNHSYYHNVYGMLMARSTYEGMKLADKDKRPFVLTRAGFIGSQRYAATWTGDNVS 218
            +         HN+YG  MA +T E  K    +KR F+LTR+ F GS ++AA W GDN +
Sbjct: 486 AVQHWGKQYDIHNLYGYSMAVATAEAAKTVFPNKRSFILTRSTFAGSGKFAAHWLGDNTA 545
Query: 219 NWEHLHMSISMVLQLGLSGQPFSGPDIGGFDGNATPRLFGRWMGIGAMFPFCRGHTESDA 278
            W+ L  SI  VL+  L G P  GPDI GF  +    L  RWM +GA +PF R H     
Sbjct: 546 TWDDLRWSIPGVLEFNLFGIPMVGPDICGFALDTPEELCRRWMQLGAFYPFSRNHNGQGY 605
Query: 279 IDHEPWSFGEEVLFCSS 295
            D +P SFG + L  +S
Sbjct: 606 KDQDPASFGADSLLLNS 622
>pdb|2QLY|A Chain A, Crystral Structure Of The N-Terminal Subunit Of Human Maltase- Glucoamylase Length = 870 Back     alignment and structure
>pdb|2G3M|A Chain A, Crystal Structure Of The Sulfolobus Solfataricus Alpha- Glucosidase Mala Length = 693 Back     alignment and structure
>pdb|3LPO|A Chain A, Crystal Structure Of The N-Terminal Domain Of Sucrase-Isomal Length = 898 Back     alignment and structure
>pdb|3PHA|A Chain A, The Crystal Structure Of The W169y Mutant Of Alpha-Glucosidase (Gh31 Family) From Ruminococcus Obeum Atcc 29174 In Complex With Acarbose Length = 667 Back     alignment and structure
>pdb|3NUK|A Chain A, The Crystal Structure Of The W169y Mutant Of Alpha-Glucosidase (Family 31) From Ruminococcus Obeum Atcc 29174 Length = 666 Back     alignment and structure
>pdb|3M46|A Chain A, The Crystal Structure Of The D73a Mutant Of Glycoside Hydrolase (Family 31) From Ruminococcus Obeum Atcc 29174 Length = 666 Back     alignment and structure
>pdb|3NSX|A Chain A, The Crystal Structure Of The The Crystal Structure Of The D420a Mutant Of The Alpha-Glucosidase (Family 31) From Ruminococcus Obeum Atcc 29174 Length = 666 Back     alignment and structure
>pdb|3M6D|A Chain A, The Crystal Structure Of The D307a Mutant Of Glycoside Hydrolase (Family 31) From Ruminococcus Obeum Atcc 29174 Length = 666 Back     alignment and structure
>pdb|3N04|A Chain A, The Crystal Structure Of The Alpha-Glucosidase (Family 31) From Ruminococcus Obeum Atcc 29174 Length = 666 Back     alignment and structure
>pdb|3TON|A Chain A, Crystral Structure Of The C-Terminal Subunit Of Human Maltase- Glucoamylase Length = 908 Back     alignment and structure
>pdb|4B9Y|A Chain A, Crystal Structure Of Apo Agd31b, Alpha-transglucosylase In Glycoside Hydrolase Family 31 Length = 817 Back     alignment and structure
>pdb|1XSI|A Chain A, Structure Of A Family 31 Alpha Glycosidase Length = 778 Back     alignment and structure
>pdb|2F2H|A Chain A, Structure Of The Yici Thiosugar Michaelis Complex Length = 773 Back     alignment and structure
>pdb|2X2H|A Chain A, Crystal Structure Of The Gracilariopsis Lemaneiformis Alpha- 1,4-Glucan Lyase Length = 1027 Back     alignment and structure
>pdb|1WE5|A Chain A, Crystal Structure Of Alpha-Xylosidase From Escherichia Coli Length = 772 Back     alignment and structure
>pdb|2XVG|A Chain A, Crystal Structure Of Alpha-Xylosidase (Gh31) From Cellvibrio Japonicus Length = 1020 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query307
2g3m_A 693 Maltase, alpha-glucosidase; hydrolase, glycoside h 1e-144
3nsx_A 666 Alpha-glucosidase; structural genomics, PSI-2, pro 1e-140
3l4y_A 875 Maltase-glucoamylase, intestinal; glycoside hydrol 1e-136
3lpp_A 898 Sucrase-isomaltase; glycoside hydrolase family 31, 1e-132
2f2h_A 773 Putative family 31 glucosidase YICI; BETA8alpha8 b 1e-124
2x2h_A 1027 Alpha-1,4-glucan lyase isozyme 1; anhydrofructose 1e-117
3top_A 908 Maltase-glucoamylase, intestinal; membrane, hydrol 1e-114
2xvl_A 1020 Alpha-xylosidase, putative, XYL31A; hydrolase, gly 1e-109
1zy9_A564 Alpha-galactosidase; TM1192, struc genomics, joint 7e-09
>2g3m_A Maltase, alpha-glucosidase; hydrolase, glycoside hydrolase family 31, multidomain protein, (beta/alpha)8 barrel, retaining mechanism; 2.55A {Sulfolobus solfataricus} PDB: 2g3n_A* Length = 693 Back     alignment and structure
 Score =  420 bits (1082), Expect = e-144
 Identities = 103/313 (32%), Positives = 160/313 (51%), Gaps = 31/313 (9%)

Query: 4   IREFVRTFREKGIPCDVIWMDIDYMDGFRCFTFDKERFPDPKSLAADLHLNGFKAIWMLD 63
           + E V   +++G     +++DI YMD ++ FT+   RFP+PK L  +LH    K I ++D
Sbjct: 192 VVELVDIMQKEGFRVAGVFLDIHYMDSYKLFTWHPYRFPEPKKLIDELHKRNVKLITIVD 251

Query: 64  PGIKHEDGYFVYDSGSKIDVWIQKADGTPFIGEVWPGPCVFPDYTQSKVRSWWGSLVKDF 123
            GI+ +  Y  + SG  +  + +   G  F+G++WPG  V+PD+ +   R WW  L+ ++
Sbjct: 252 HGIRVDQNYSPFLSG--MGKFCEIESGELFVGKMWPGTTVYPDFFREDTREWWAGLISEW 309

Query: 124 IYNGVDGIWNDMNEPAVF-------------------KSVTKTMPESNIHRGDDEIGGCQ 164
           +  GVDGIW DMNEP  F                     +  T P++ +H      G   
Sbjct: 310 LSQGVDGIWLDMNEPTDFSRAIEIRDVLSSLPVQFRDDRLVTTFPDNVVHYLR---GKRV 366

Query: 165 NHSYYHNVYGMLMARSTYEGMKLADKDKRPFVLTRAGFIGSQRYAATWTGDNVSNWEHLH 224
            H    N Y +  A +T++G + + +    F+L+RAG+ G QRYA  WTGDN  +W+ L 
Sbjct: 367 KHEKVRNAYPLYEAMATFKGFRTSHR-NEIFILSRAGYAGIQRYAFIWTGDNTPSWDDLK 425

Query: 225 MSISMVLQLGLSGQPFSGPDIGGFDG------NATPRLFGRWMGIGAMFPFCRGHTESDA 278
           + + +VL L +SG PF G DIGGF G      + +  L  ++  +   FPF R H  +D 
Sbjct: 426 LQLQLVLGLSISGVPFVGCDIGGFQGRNFAEIDNSMDLLVKYYALALFFPFYRSHKATDG 485

Query: 279 IDHEPWSFGEEVL 291
           ID EP    +   
Sbjct: 486 IDTEPVFLPDYYK 498
>3nsx_A Alpha-glucosidase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, acarbose; 1.57A {Ruminococcus obeum} PDB: 3ffj_A 3n04_A 3pha_A* 3nuk_A 3nxm_A* 3m46_A 3mkk_A* 3m6d_A* 3nqq_A* 3poc_A* Length = 666 Back     alignment and structure
>3l4y_A Maltase-glucoamylase, intestinal; glycoside hydrolase family 31, cell membrane, disulfide bond, glycoprotein, glycosidase, hydrolase, membrane; HET: NR4 NAG; 1.80A {Homo sapiens} PDB: 3l4u_A* 3l4v_A* 3l4w_A* 3l4x_A* 3l4t_A* 3l4z_A* 2qmj_A* 2qly_A* 3ctt_A* Length = 875 Back     alignment and structure
>3lpp_A Sucrase-isomaltase; glycoside hydrolase family 31, alpha-glucosidase membrane, disease mutation, disulfide bond, glycoprotein, glycosidase; HET: NAG BMA MAN KTL; 2.15A {Homo sapiens} PDB: 3lpo_A* Length = 898 Back     alignment and structure
>2f2h_A Putative family 31 glucosidase YICI; BETA8alpha8 barrel, hydrolase; HET: MPO XTG; 1.95A {Escherichia coli} SCOP: b.150.1.1 b.30.5.11 b.71.1.4 c.1.8.13 PDB: 1xsj_A 1xsi_A 1xsk_A* 1we5_A* Length = 773 Back     alignment and structure
>2x2h_A Alpha-1,4-glucan lyase isozyme 1; anhydrofructose pathway, glycoside hydrolase family 3 starch binding domain; 2.06A {Gracilariopsis lemaneiformis} PDB: 2x2i_A* 2x2j_A* Length = 1027 Back     alignment and structure
>3top_A Maltase-glucoamylase, intestinal; membrane, hydrolase-hydrolase inhibitor complex; HET: ACR; 2.88A {Homo sapiens} PDB: 3ton_A* Length = 908 Back     alignment and structure
>2xvl_A Alpha-xylosidase, putative, XYL31A; hydrolase, glycosyl hydrolase family 31, (beta/alpha)8 barre; HET: PXN; 2.30A {Cellvibrio japonicus} PDB: 2xvg_A* 2xvk_A* Length = 1020 Back     alignment and structure
>1zy9_A Alpha-galactosidase; TM1192, struc genomics, joint center for structural genomics, JCSG, prote structure initiative, PSI, hydrolase; 2.34A {Thermotoga maritima} SCOP: b.30.5.11 c.1.8.13 Length = 564 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query307
3nsx_A 666 Alpha-glucosidase; structural genomics, PSI-2, pro 100.0
3lpp_A 898 Sucrase-isomaltase; glycoside hydrolase family 31, 100.0
3l4y_A 875 Maltase-glucoamylase, intestinal; glycoside hydrol 100.0
3top_A 908 Maltase-glucoamylase, intestinal; membrane, hydrol 100.0
2g3m_A 693 Maltase, alpha-glucosidase; hydrolase, glycoside h 100.0
4ba0_A 817 Alpha-glucosidase, putative, ADG31B; hydrolase; HE 100.0
2f2h_A 773 Putative family 31 glucosidase YICI; BETA8alpha8 b 100.0
2xvl_A 1020 Alpha-xylosidase, putative, XYL31A; hydrolase, gly 100.0
2x2h_A 1027 Alpha-1,4-glucan lyase isozyme 1; anhydrofructose 100.0
2xn2_A732 Alpha-galactosidase; hydrolase, glycosidase; HET: 99.92
1zy9_A564 Alpha-galactosidase; TM1192, struc genomics, joint 99.88
3mi6_A 745 Alpha-galactosidase; NESG, structural genomics, PS 99.86
2yfo_A720 Alpha-galactosidase-sucrose kinase agask; hydrolas 99.85
4fnq_A729 Alpha-galactosidase AGAB; glycoside hydrolase, hyd 99.73
3cc1_A433 BH1870 protein, putative alpha-N-acetylgalactosami 99.63
3hg3_A 404 Alpha-galactosidase A; glycoprotein, carbohydrate- 99.42
1uas_A362 Alpha-galactosidase; TIM-barrel, beta-alpha-barrel 99.41
3a5v_A397 Alpha-galactosidase; beta/alpha barrel, N-glycosyl 99.36
3lrk_A 479 Alpha-galactosidase 1; tetramer, GH27, glycoprotei 99.35
1szn_A417 Alpha-galactosidase; (beta/alpha)8 barrel,TWO doma 99.34
3a21_A 614 Putative secreted alpha-galactosidase; beta-alpha- 99.12
4do4_A400 Alpha-N-acetylgalactosaminidase; pharmacological c 99.11
1ua7_A422 Alpha-amylase; beta-alpha-barrels, acarbose, greek 97.47
3zss_A 695 Putative glucanohydrolase PEP1A; alpha-glucan bios 97.43
4aie_A 549 Glucan 1,6-alpha-glucosidase; hydrolase, glycoside 97.42
1m53_A 570 Isomaltulose synthase; klebsiella SP. LX3, sucrose 97.32
4gqr_A 496 Pancreatic alpha-amylase; glycosyl hydrolase, diab 97.3
1wza_A 488 Alpha-amylase A; hydrolase, halophilic, thermophil 97.28
3dhu_A 449 Alpha-amylase; structural genomics, hydrolase, gly 97.21
1lwj_A441 4-alpha-glucanotransferase; alpha-amylase family, 97.18
1gcy_A 527 Glucan 1,4-alpha-maltotetrahydrolase; beta-alpha-b 97.17
2aaa_A 484 Alpha-amylase; glycosidase; 2.10A {Aspergillus nig 97.17
3aj7_A 589 Oligo-1,6-glucosidase; (beta/alpha)8-barrel, hydro 97.15
2zic_A 543 Dextran glucosidase; TIM barrel, (beta/alpha)8-bar 97.08
1zja_A 557 Trehalulose synthase; sucrose isomerase, alpha-amy 97.06
2guy_A478 Alpha-amylase A; (beta-alpha) 8 barrel, hydrolase; 97.06
1ht6_A405 AMY1, alpha-amylase isozyme 1; barley, beta-alpha- 97.06
3edf_A 601 FSPCMD, cyclomaltodextrinase; alpha-cyclodextrin c 97.0
1g5a_A 628 Amylosucrase; glycosyltransferase, glycoside hydro 96.99
1uok_A 558 Oligo-1,6-glucosidase; sugar degradation, hydrolas 96.99
2ze0_A 555 Alpha-glucosidase; TIM barrel, glucoside hydrolase 96.98
2wsk_A 657 Glycogen debranching enzyme; carbohydrate metaboli 96.95
1m7x_A 617 1,4-alpha-glucan branching enzyme; alpha/beta barr 96.92
1wzl_A585 Alpha-amylase II; pullulan, GH-13, alpha-amylase f 96.9
2bhu_A 602 Maltooligosyltrehalose trehalohydrolase; alpha-amy 96.89
2z1k_A475 (NEO)pullulanase; hydrolase, structural genomics, 96.8
2e8y_A 718 AMYX protein, pullulanase; multiple domain, beta-a 96.71
3k1d_A 722 1,4-alpha-glucan-branching enzyme; mycobacterium t 96.7
1ea9_C583 Cyclomaltodextrinase; hydrolase, glycosidase; 3.2A 96.69
2vr5_A 718 Glycogen operon protein GLGX; hydrolase, glycosida 96.67
2wc7_A 488 Alpha amylase, catalytic region; CD/PUL-hydrolyzin 96.67
1j0h_A588 Neopullulanase; beta-alpha-barrels, hydrolase; 1.9 96.58
1g94_A 448 Alpha-amylase; beta-alpha-8-barrel, 3 domain struc 96.51
3czg_A 644 Sucrose hydrolase; (alpha/beta)8-barrel; HET: GLC; 96.5
3m07_A 618 Putative alpha amylase; IDP00968, csgid, structura 96.47
1jae_A 471 Alpha-amylase; glycosidase, carbohydrate metabolis 96.47
3aml_A 755 OS06G0726400 protein; starch-branching, transferas 96.44
2aam_A309 Hypothetical protein TM1410; structural genomics, 96.39
1bf2_A 750 Isoamylase; hydrolase, glycosidase, debranching en 96.33
1d3c_A 686 Cyclodextrin glycosyltransferase; alpha-amylase, p 96.22
4aee_A696 Alpha amylase, catalytic region; hydrolase, hypert 96.21
3bmv_A 683 Cyclomaltodextrin glucanotransferase; glycosidase, 96.2
3bc9_A599 AMYB, alpha amylase, catalytic region; acarbose, t 96.19
2wan_A 921 Pullulanase; hydrolase, glycoside hydrolase, polys 96.19
3ucq_A 655 Amylosucrase; thermostability, amylose synthesis, 96.17
1cyg_A 680 Cyclodextrin glucanotransferase; glycosyltransfera 96.14
1ud2_A480 Amylase, alpha-amylase; calcium-free, alkaline, hy 96.14
3bh4_A483 Alpha-amylase; calcium, carbohydrate metabolism, g 96.1
3faw_A 877 Reticulocyte binding protein; TIM barrel, beta bar 95.99
1mxg_A435 Alpha amylase; hyperthermostable, family 13 glycos 95.95
1hvx_A 515 Alpha-amylase; hydrolase, glycosyltransferase, the 95.94
1ji1_A 637 Alpha-amylase I; beta/alpha barrel, hydrolase; 1.6 95.83
2ya0_A 714 Putative alkaline amylopullulanase; hydrolase, gly 95.81
1wpc_A485 Glucan 1,4-alpha-maltohexaosidase; maltohexaose-pr 95.79
3a24_A641 Alpha-galactosidase; glycoside hydrolase family 97 95.79
1qho_A 686 Alpha-amylase; glycoside hydrolase, starch degrada 95.76
4aef_A645 Neopullulanase (alpha-amylase II); hydrolase, ther 95.41
3vgf_A 558 Malto-oligosyltrehalose trehalohydrolase; alpha/be 95.24
2ya1_A 1014 Putative alkaline amylopullulanase; hydrolase, gly 95.22
2dh2_A 424 4F2 cell-surface antigen heavy chain; TIM-barrel, 94.32
1r7a_A 504 Sucrose phosphorylase; beta-alpha-barrels, dimer, 94.07
3k8k_A 669 Alpha-amylase, SUSG; alpha8/BETA8 barrel, CBM, bet 94.06
2d73_A738 Alpha-glucosidase SUSB; glycoside hydrolase family 93.25
2fhf_A 1083 Pullulanase; multiple domain, beta-alpha-barrel, a 93.1
4aio_A 884 Limit dextrinase; hydrolase, pullulanase, glycosid 92.9
1gjw_A637 Maltodextrin glycosyltransferase; alpha-amylase, m 92.41
1iv8_A 720 Maltooligosyl trehalose synthase; beta alpha barre 90.82
3hje_A 704 704AA long hypothetical glycosyltransferase; treha 89.47
3vmn_A 643 Dextranase; TIM barrel, immunoglobrin fold, greek- 87.44
2zxd_A455 Alpha-L-fucosidase, putative; TIM barrel, hydrolas 86.53
3tty_A 675 Beta-GAL, beta-galactosidase; TIM barrel, glycosid 86.44
3ues_A 478 Alpha-1,3/4-fucosidase; TIM barrel, hydrolase-hydr 83.87
4awe_A387 Endo-beta-D-1,4-mannanase; hydrolase, endo-mannana 82.39
1kwg_A 645 Beta-galactosidase; TIM barrel, glycoside hydrolas 82.23
2wvv_A450 Alpha-L-fucosidase; alpha-L-fucose, hydrolase, gly 81.68
3thd_A 654 Beta-galactosidase; TIM-barrel domain, glycosyl hy 81.12
>3nsx_A Alpha-glucosidase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, acarbose; 1.57A {Ruminococcus obeum} PDB: 3ffj_A 3n04_A 3pha_A* 3nuk_A 3nxm_A* 3m46_A 3mkk_A* 3m6d_A* 3nqq_A* 3poc_A* Back     alignment and structure
Probab=100.00  E-value=3.8e-81  Score=619.85  Aligned_cols=300  Identities=33%  Similarity=0.658  Sum_probs=275.1

Q ss_pred             hHHHHHHHHHHHcCCCcceEEecccccCCcceeeecCCCCCChHHHHHHHHHCCCeEEeecCCccccCCCcccccccccc
Q 021825            2 ILIREFVRTFREKGIPCDVIWMDIDYMDGFRCFTFDKERFPDPKSLAADLHLNGFKAIWMLDPGIKHEDGYFVYDSGSKI   81 (307)
Q Consensus         2 ~~v~~~~~~~~~~~iP~d~i~lD~~w~~~~~~f~~d~~~FPd~~~~~~~l~~~G~k~~~~~~P~i~~~~~~~~~~~~~~~   81 (307)
                      ++|+++++++|+++||||+||+|++|++++++|+||+++||||++|+++||++|+|++++++|+|+.+++|.+|+++.++
T Consensus       178 ~~v~~v~~~~~~~~IP~dvi~lD~dy~~~~~~ft~d~~~FPdp~~mv~~Lh~~G~k~v~~idP~i~~~~~~~~y~e~~~~  257 (666)
T 3nsx_A          178 EDFRAVAKGYRENHIPIDMIYMDIDYMQDFKDFTVNEKNFPDFPEFVKEMKDQELRLIPIIDAGVKVEKGYEVYEEGVKN  257 (666)
T ss_dssp             HHHHHHHHHHHHTTCCCCEEEECGGGSSTTCTTCCCTTTCTTHHHHHHHHHTTTCEEEEEEESCEECCTTCHHHHHHHHT
T ss_pred             HHHHHHHHHHHhcCCCcceEEEecHHHHhhcccccChhhCCCHHHHHHHHHHcCceEEeeeccceeeecCchHHhhhccc
Confidence            68999999999999999999999999999999999999999999999999999999999999999988888999999999


Q ss_pred             ceeEEcCCCCceeeeecCCCccCCCCCChHHHHHHHHHHHHHhhcCccEEEecCCCCcccCCCCC---------------
Q 021825           82 DVWIQKADGTPFIGEVWPGPCVFPDYTQSKVRSWWGSLVKDFIYNGVDGIWNDMNEPAVFKSVTK---------------  146 (307)
Q Consensus        82 ~~~~~~~~g~~~~~~~w~g~~~~~Dftnp~a~~ww~~~l~~l~~~Gvdg~w~D~~e~~~~~~~~~---------------  146 (307)
                      ++|+++++|+++++.+|||.+++||||||+|++||.++++.+++.||||||+|+|||+.|+..+.               
T Consensus       258 g~fvk~~~G~~~~g~~WpG~~~~pDftnp~a~~ww~~~~~~~~~~Gidg~W~DmnEp~~f~~~~~~~~~~~~~~~~~~~~  337 (666)
T 3nsx_A          258 NYFCKREDGSDFVAAVWPGDTHFPDMLNPEARKWFGDKYRFLIDQGIEGFWNDMNEPAIFYSSEGLAEAKEFAGEFAKDT  337 (666)
T ss_dssp             TCBCBCTTSCBCCEEETTEEEECBCTTSHHHHHHHHHTTHHHHTTTCCEEEEESTTTCCSEEHHHHHHHHHHHHHHHHCC
T ss_pred             CccccCCCCCcceEEecCCccCCccccCHHHHHHhhhhhhHHHhccchhhhhccCCcceEecHHHHHHHHHHHHhhhccc
Confidence            99999999999999999999999999999999999999999999999999999999998853210               


Q ss_pred             -CCCC-------------------CcccCCCCCCCCccccccccchhHHHHHHHHHHHHHhhcCCCCcEEEEccccCCCC
Q 021825          147 -TMPE-------------------SNIHRGDDEIGGCQNHSYYHNVYGMLMARSTYEGMKLADKDKRPFVLTRAGFIGSQ  206 (307)
Q Consensus       147 -~~p~-------------------~~~~~~~~~~~~~~~~~~~hn~y~~~~~~~~~~~~~~~~~~~r~~~~sRs~~~G~q  206 (307)
                       .++.                   ...|..   .|+...|+++||+|++++++++++++++..+++|||++|||+|+|+|
T Consensus       338 ~~~~~~~~~~~~~~~l~~~~~~~~~~~h~~---~g~~~~~~~~hNlYg~~~~~at~e~l~~~~~~~RpfilsRS~~aGsq  414 (666)
T 3nsx_A          338 EGKIHPWAMQAKMKDIVNSPEDYKRFYHNV---NGKKIRHDKVHNLFGYNMTRAAGEAFERIDPEKRFLMFSRSSYIGMH  414 (666)
T ss_dssp             SSCSCHHHHHHHHHHTTTCHHHHTSCEEEE---TTEEEEGGGGGGGHHHHHHHHHHHHHHHHCTTCCCEEEESSEETTGG
T ss_pred             cchhhhhhHHHHHhhhcCChHHHHHHhhhc---CCeEEehhhhhhhhccchhHHHHHHHHhhCCCceEEEEeccceecee
Confidence             0100                   001110   02234688999999999999999999999889999999999999999


Q ss_pred             cceeeecCCCCCCchHHHHHHHHHHHhcccCCCcccccCCCCCCCCChhHHHHHHHhhhhcccccccCCCCCCCCCcccc
Q 021825          207 RYAATWTGDNVSNWEHLHMSISMVLQLGLSGQPFSGPDIGGFDGNATPRLFGRWMGIGAMFPFCRGHTESDAIDHEPWSF  286 (307)
Q Consensus       207 r~~~~w~GD~~s~W~~L~~~i~~~l~~~l~G~p~~g~DigGf~~~~~~EL~~RW~Q~~af~P~~r~h~~~~~~~~~Pw~~  286 (307)
                      ||+++|+||+.++|+.||.+|+++|++||+|+||||+|||||.+++++|||+||+|+|||+|+||+|+..++.++|||.|
T Consensus       415 ry~~~W~GDn~s~W~~L~~sI~~~L~~~l~G~p~~g~DIGGF~g~~~~EL~~RW~Q~GaF~P~~R~H~~~~~~~~ePw~~  494 (666)
T 3nsx_A          415 RYGGIWMGANKSWWSHILLNLKMLPSLNMCGFMYTGADLGGFGDDTTRDLLLRFLALGVFTPLMRDHAAEGTREQECYQF  494 (666)
T ss_dssp             GTCEEEECCSSCCTHHHHHHHHHHHHHHHTTCCSEEECCCCCBTCSCHHHHHHHHHHHTTSSSEEEEECSSBCCCCGGGS
T ss_pred             ecCceecCCCccHHHHHHHhhhhccccccceeeeeccccCcCCCCchHHHHHHHHHHhcCchhhhcccccCccccccccc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999887788999999


Q ss_pred             ChhhHHHHHHHH-----HHhhhhhc
Q 021825          287 GEEVLFCSSIVI-----IAFFWFKL  306 (307)
Q Consensus       287 ~~~~~~~~r~~i-----~l~~~~~~  306 (307)
                      +  +++++|++|     +|||+|||
T Consensus       495 ~--~~~~~r~~i~lRy~LlPYlYtl  517 (666)
T 3nsx_A          495 E--NIEDFRSVINARYRLVPYLYSE  517 (666)
T ss_dssp             T--TTHHHHHHHHHHHHHHHHHHHH
T ss_pred             C--CHHHHHHHhhhhhhhHHHHHHH
Confidence            8  899999998     67899986
>3lpp_A Sucrase-isomaltase; glycoside hydrolase family 31, alpha-glucosidase membrane, disease mutation, disulfide bond, glycoprotein, glycosidase; HET: NAG BMA MAN KTL; 2.15A {Homo sapiens} PDB: 3lpo_A* Back     alignment and structure
>3l4y_A Maltase-glucoamylase, intestinal; glycoside hydrolase family 31, cell membrane, disulfide bond, glycoprotein, glycosidase, hydrolase, membrane; HET: NR4 NAG; 1.80A {Homo sapiens} PDB: 3l4u_A* 3l4v_A* 3l4w_A* 3l4x_A* 3l4t_A* 3l4z_A* 2qmj_A* 2qly_A* 3ctt_A* Back     alignment and structure
>3top_A Maltase-glucoamylase, intestinal; membrane, hydrolase-hydrolase inhibitor complex; HET: ACR; 2.88A {Homo sapiens} PDB: 3ton_A* Back     alignment and structure
>2g3m_A Maltase, alpha-glucosidase; hydrolase, glycoside hydrolase family 31, multidomain protein, (beta/alpha)8 barrel, retaining mechanism; 2.55A {Sulfolobus solfataricus} PDB: 2g3n_A* Back     alignment and structure
>4ba0_A Alpha-glucosidase, putative, ADG31B; hydrolase; HET: 5GF PGE ARG; 1.85A {Cellvibrio japonicus} PDB: 4b9z_A* 4b9y_A* Back     alignment and structure
>2f2h_A Putative family 31 glucosidase YICI; BETA8alpha8 barrel, hydrolase; HET: MPO XTG; 1.95A {Escherichia coli} SCOP: b.150.1.1 b.30.5.11 b.71.1.4 c.1.8.13 PDB: 1xsj_A 1xsi_A 1xsk_A* 1we5_A* Back     alignment and structure
>2xvl_A Alpha-xylosidase, putative, XYL31A; hydrolase, glycosyl hydrolase family 31, (beta/alpha)8 barre; HET: PXN; 2.30A {Cellvibrio japonicus} PDB: 2xvg_A* 2xvk_A* Back     alignment and structure
>2x2h_A Alpha-1,4-glucan lyase isozyme 1; anhydrofructose pathway, glycoside hydrolase family 3 starch binding domain; 2.06A {Gracilariopsis lemaneiformis} PDB: 2x2i_A* 2x2j_A* Back     alignment and structure
>2xn2_A Alpha-galactosidase; hydrolase, glycosidase; HET: SME GLA IMD; 1.58A {Lactobacillus acidophilus ncfm} PDB: 2xn1_A* 2xn0_A* Back     alignment and structure
>1zy9_A Alpha-galactosidase; TM1192, struc genomics, joint center for structural genomics, JCSG, prote structure initiative, PSI, hydrolase; 2.34A {Thermotoga maritima} SCOP: b.30.5.11 c.1.8.13 Back     alignment and structure
>3mi6_A Alpha-galactosidase; NESG, structural genomics, PSI-2, protein structure initiati northeast structural genomics consortium, hydrolase; 2.70A {Lactobacillus brevis} Back     alignment and structure
>2yfo_A Alpha-galactosidase-sucrose kinase agask; hydrolase; HET: GLA GAL; 1.35A {Ruminococcus gnavus E1} PDB: 2yfn_A* Back     alignment and structure
>4fnq_A Alpha-galactosidase AGAB; glycoside hydrolase, hydrolase; 1.80A {Geobacillus stearothermophilus} PDB: 4fnr_A 4fnu_A* 4fnt_A* 4fns_A* 4fnp_A* Back     alignment and structure
>3cc1_A BH1870 protein, putative alpha-N-acetylgalactosaminidase; structural genomic center for structural genomics, JCSG; HET: MSE PGE PG4 P33; 2.00A {Bacillus halodurans c-125} Back     alignment and structure
>3hg3_A Alpha-galactosidase A; glycoprotein, carbohydrate-binding protein, glycosidase, Lys enzyme, (beta/alpha)8 barrel, disease mutation; HET: NAG BMA MAN GLA GLC 2PE; 1.90A {Homo sapiens} PDB: 3tv8_A* 3lx9_A* 3lxa_A* 3lxb_A* 3lxc_A* 3s5z_A* 1r47_A* 1r46_A* 3gxn_A* 3gxt_A* 3hg2_A* 3hg4_A* 3hg5_A* 3gxp_A* 3s5y_A* Back     alignment and structure
>1uas_A Alpha-galactosidase; TIM-barrel, beta-alpha-barrel, greek KEY motif, hydrolase; HET: GLA; 1.50A {Oryza sativa} SCOP: b.71.1.1 c.1.8.1 Back     alignment and structure
>3a5v_A Alpha-galactosidase; beta/alpha barrel, N-glycosylation, hydrolase; HET: MAN NAG BMA 1PG; 2.00A {Umbelopsis vinacea} Back     alignment and structure
>3lrk_A Alpha-galactosidase 1; tetramer, GH27, glycoprotein, glycosida hydrolase; HET: NAG BTB; 1.95A {Saccharomyces cerevisiae} PDB: 3lrl_A* 3lrm_A* Back     alignment and structure
>1szn_A Alpha-galactosidase; (beta/alpha)8 barrel,TWO domains, glycoprotein, hydrolase; HET: NAG BMA MAN; 1.54A {Hypocrea jecorina} SCOP: b.71.1.1 c.1.8.1 PDB: 1t0o_A* Back     alignment and structure
>3a21_A Putative secreted alpha-galactosidase; beta-alpha-barrel, greek KEY motif, beta-jellyroll, beta-TRE hydrolase; HET: GOL 1PG EPE; 1.51A {Streptomyces avermitilis} PDB: 3a22_A* 3a23_A* Back     alignment and structure
>4do4_A Alpha-N-acetylgalactosaminidase; pharmacological chaperone, (beta/alpha)8 barrel, glycosidase carbohydrate-binding protein, glycoprotein, lysosome; HET: NAG BMA MAN DJN CIT FUC; 1.40A {Homo sapiens} PDB: 3h54_A* 3h53_A* 3igu_A* 3h55_A* 4do5_A* 4do6_A* 1ktb_A* 1ktc_A* Back     alignment and structure
>1ua7_A Alpha-amylase; beta-alpha-barrels, acarbose, greek-KEY motif, hydrolase; HET: ACI GLD GLC G6D BGC; 2.21A {Bacillus subtilis} SCOP: b.71.1.1 c.1.8.1 PDB: 1bag_A* 3dc0_A Back     alignment and structure
>3zss_A Putative glucanohydrolase PEP1A; alpha-glucan biosynthesis, glycoside hydrolase FA; 1.80A {Streptomyces coelicolor} PDB: 3zst_A* 3zt5_A* 3zt6_A* 3zt7_A* Back     alignment and structure
>4aie_A Glucan 1,6-alpha-glucosidase; hydrolase, glycoside hydrolase 13; HET: MES GOL; 2.05A {Lactobacillus acidophilus ncfm} Back     alignment and structure
>1m53_A Isomaltulose synthase; klebsiella SP. LX3, sucrose isomerization, isomerase; 2.20A {Klebsiella SP} SCOP: b.71.1.1 c.1.8.1 Back     alignment and structure
>4gqr_A Pancreatic alpha-amylase; glycosyl hydrolase, diabetes, obesity, digestion, glycosidas inhibition, flavonol, drug design; HET: NAG MYC; 1.20A {Homo sapiens} PDB: 1cpu_A* 1bsi_A 1u2y_A* 1u30_A* 1u33_A* 1xcw_A* 1xcx_A* 1xd0_A* 1xd1_A* 2qmk_A* 2qv4_A* 3bai_A* 3baj_A* 3baw_A* 3ij7_A* 1hny_A* 3ij9_A* 3ij8_A* 4gqq_A* 1kgw_A* ... Back     alignment and structure
>1wza_A Alpha-amylase A; hydrolase, halophilic, thermophilic; 1.60A {Halothermothrix orenii} SCOP: b.71.1.1 c.1.8.1 Back     alignment and structure
>3dhu_A Alpha-amylase; structural genomics, hydrolase, glycosidase, PSI-2, protein structure initiative; 2.00A {Lactobacillus plantarum} Back     alignment and structure
>1lwj_A 4-alpha-glucanotransferase; alpha-amylase family, acarbose, (beta/alpha)8 barrel; HET: ACG; 2.50A {Thermotoga maritima} SCOP: b.71.1.1 c.1.8.1 PDB: 1lwh_A* Back     alignment and structure
>1gcy_A Glucan 1,4-alpha-maltotetrahydrolase; beta-alpha-barrel, beta sheet; 1.60A {Pseudomonas stutzeri} SCOP: b.71.1.1 c.1.8.1 PDB: 1jdc_A* 1jda_A* 1jdd_A* 1qi5_A* 1qi3_A* 1qi4_A* 2amg_A 1qpk_A* Back     alignment and structure
>2aaa_A Alpha-amylase; glycosidase; 2.10A {Aspergillus niger} SCOP: b.71.1.1 c.1.8.1 Back     alignment and structure
>3aj7_A Oligo-1,6-glucosidase; (beta/alpha)8-barrel, hydrolase; 1.30A {Saccharomyces cerevisiae} PDB: 3a4a_A* 3a47_A 3axi_A* 3axh_A* Back     alignment and structure
>2zic_A Dextran glucosidase; TIM barrel, (beta/alpha)8-barrel, hydrolase; 2.20A {Streptococcus mutans} PDB: 2zid_A* Back     alignment and structure
>1zja_A Trehalulose synthase; sucrose isomerase, alpha-amylase family, (beta/alpha)8 barrel; 1.60A {Pseudomonas mesoacidophila} PDB: 1zjb_A 2pwd_A* 2pwh_A 2pwg_A 2pwe_A* 2pwf_A* 3gbe_A* 3gbd_A* Back     alignment and structure
>2guy_A Alpha-amylase A; (beta-alpha) 8 barrel, hydrolase; HET: NAG BMA; 1.59A {Aspergillus oryzae} SCOP: b.71.1.1 c.1.8.1 PDB: 2gvy_A* 3kwx_A* 6taa_A 7taa_A* 2taa_A Back     alignment and structure
>1ht6_A AMY1, alpha-amylase isozyme 1; barley, beta-alpha-barrel, hydrolase; 1.50A {Hordeum vulgare} SCOP: b.71.1.1 c.1.8.1 PDB: 1p6w_A* 1rpk_A* 3bsg_A 2qpu_A* 1rp8_A* 1rp9_A* 2qps_A 3bsh_A* 1ava_A 1amy_A 1bg9_A* Back     alignment and structure
>3edf_A FSPCMD, cyclomaltodextrinase; alpha-cyclodextrin complex, glycosidase, hydrolase; HET: CE6 ACX; 1.65A {Flavobacterium SP} PDB: 3edj_A* 3edk_A* 3ede_A 3edd_A* 1h3g_A Back     alignment and structure
>1g5a_A Amylosucrase; glycosyltransferase, glycoside hydrolase, (beta-alpha)8 barrel; HET: EPE; 1.40A {Neisseria polysaccharea} SCOP: b.71.1.1 c.1.8.1 PDB: 1jg9_A* 1mw1_A* 1mw2_A* 1mw3_A* 3ueq_A* 1jgi_A* 1mvy_A* 1mw0_A* 1s46_A* 1zs2_A* Back     alignment and structure
>1uok_A Oligo-1,6-glucosidase; sugar degradation, hydrolase, TIM-barrel glycosidase; 2.00A {Bacillus cereus} SCOP: b.71.1.1 c.1.8.1 Back     alignment and structure
>2ze0_A Alpha-glucosidase; TIM barrel, glucoside hydrolase, extremophIle, hydrolase; 2.00A {Geobacillus SP} Back     alignment and structure
>2wsk_A Glycogen debranching enzyme; carbohydrate metabolism, hydrolase, glycosidase, ISO-amylase glycosyl hydrolase, glycogen metabolism; 2.25A {Escherichia coli k-12} Back     alignment and structure
>1m7x_A 1,4-alpha-glucan branching enzyme; alpha/beta barrel, beta sandwich, transferase; 2.30A {Escherichia coli} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 3o7y_A* 3o7z_A* Back     alignment and structure
>1wzl_A Alpha-amylase II; pullulan, GH-13, alpha-amylase family, hydrolase; 2.00A {Thermoactinomyces vulgaris} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 1ji2_A 1bvz_A 1vfk_A* 3a6o_A* 1wzm_A 1jf6_A 1wzk_A 2d2o_A* 1jib_A* 1jl8_A* 1vb9_A* 1g1y_A* 1vfo_A* 1vfm_A* 1vfu_A* 1jf5_A Back     alignment and structure
>2bhu_A Maltooligosyltrehalose trehalohydrolase; alpha-amylase, protein-carbohydrate complex, desiccation resistance; HET: TRS PGE; 1.1A {Deinococcus radiodurans} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 2bhy_A* 2bhz_A* 2bxy_A* 2bxz_A* 2by0_A* 2by1_A* 2by2_A* 2by3_A* Back     alignment and structure
>2z1k_A (NEO)pullulanase; hydrolase, structural genomics, NPPSFA, national project on structural and functional analyses; HET: GLC; 2.30A {Thermus thermophilus} Back     alignment and structure
>2e8y_A AMYX protein, pullulanase; multiple domain, beta-alpha-barrel, alpha-amylase-family, HY; 2.11A {Bacillus subtilis} PDB: 2e8z_A* 2e9b_A* Back     alignment and structure
>3k1d_A 1,4-alpha-glucan-branching enzyme; mycobacterium tuberculosis H37RV, mesophilic human pathogen, RV1326C gene, glycosyl transferase; 2.33A {Mycobacterium tuberculosis} Back     alignment and structure
>1ea9_C Cyclomaltodextrinase; hydrolase, glycosidase; 3.2A {Bacillus SP} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 Back     alignment and structure
>2vr5_A Glycogen operon protein GLGX; hydrolase, glycosidase, glycosyl hydrolase, glycogen debraching; HET: GLC A16; 2.8A {Sulfolobus solfataricus} PDB: 2vnc_A* 2vuy_A Back     alignment and structure
>2wc7_A Alpha amylase, catalytic region; CD/PUL-hydrolyzing enzymes, hydrolase, glycosidase, neopullu; 2.37A {Nostoc punctiforme} PDB: 2wcs_A 2wkg_A Back     alignment and structure
>1j0h_A Neopullulanase; beta-alpha-barrels, hydrolase; 1.90A {Geobacillus stearothermophilus} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 1j0i_A* 1j0j_A* 1j0k_A* 1sma_A 1gvi_A* Back     alignment and structure
>1g94_A Alpha-amylase; beta-alpha-8-barrel, 3 domain structure, hydrolase; HET: DAF GLC; 1.74A {Pseudoalteromonas haloplanktis} SCOP: b.71.1.1 c.1.8.1 PDB: 1g9h_A* 1l0p_A 1aqm_A* 1aqh_A* 1b0i_A 1jd7_A 1jd9_A 1kxh_A* Back     alignment and structure
>3czg_A Sucrose hydrolase; (alpha/beta)8-barrel; HET: GLC; 1.80A {Xanthomonas axonopodis PV} PDB: 3cze_A* 3czl_A* 3czk_A* 2wpg_A Back     alignment and structure
>3m07_A Putative alpha amylase; IDP00968, csgid, structural genomics, center for structural genomics of infectious diseases, unknown function; HET: BTB PG4 PGE; 1.40A {Salmonella enterica subsp} Back     alignment and structure
>1jae_A Alpha-amylase; glycosidase, carbohydrate metabolism, 4-glucan-4-glucanohydrolase, hydrolase; 1.65A {Tenebrio molitor} SCOP: b.71.1.1 c.1.8.1 PDB: 1clv_A 1tmq_A 1viw_A* Back     alignment and structure
>3aml_A OS06G0726400 protein; starch-branching, transferase; HET: EPE; 1.70A {Oryza sativa japonica group} PDB: 3amk_A Back     alignment and structure
>2aam_A Hypothetical protein TM1410; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; HET: MSE UNL; 2.20A {Thermotoga maritima} SCOP: c.1.8.15 Back     alignment and structure
>1bf2_A Isoamylase; hydrolase, glycosidase, debranching enzyme; 2.00A {Pseudomonas amyloderamosa} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 Back     alignment and structure
>1d3c_A Cyclodextrin glycosyltransferase; alpha-amylase, product complex, oligosaccharide, family 13 glycosyl hydrolase, transglycosylation; HET: GLC; 1.78A {Bacillus circulans} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1 PDB: 1cxf_A* 1cxk_A* 1cdg_A* 1cxe_A* 1cxh_A* 1cxi_A* 2cxg_A* 1cgv_A* 2dij_A* 1cgy_A* 1kck_A* 1cgx_A* 1cxl_A* 1cgw_A* 1tcm_A 1kcl_A* 1eo5_A* 1eo7_A* 1dtu_A* 1ot1_A* ... Back     alignment and structure
>4aee_A Alpha amylase, catalytic region; hydrolase, hyperthermostable, cyclodextrin hydrolase, GH13; 2.28A {Staphylothermus marinus} Back     alignment and structure
>3bmv_A Cyclomaltodextrin glucanotransferase; glycosidase, thermostable, family 13 glycosyl hydrolas; 1.60A {Thermoanaerobacterium thermosulfurigenorganism_taxid} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1 PDB: 3bmw_A* 1ciu_A 1a47_A 1pj9_A* 1cgt_A Back     alignment and structure
>3bc9_A AMYB, alpha amylase, catalytic region; acarbose, thermostable, halophilic, N domain, starch binding, hydrolase; HET: G6D GLC ACI BGC ACR; 1.35A {Halothermothrix orenii} PDB: 3bcd_A* 3bcf_A Back     alignment and structure
>2wan_A Pullulanase; hydrolase, glycoside hydrolase, polysaccharide, amylase, starch, carbohydrate; 1.65A {Bacillus acidopullulyticus} Back     alignment and structure
>3ucq_A Amylosucrase; thermostability, amylose synthesis, sucrose isomerization, beta/alpha-barrel, carbohydrate binding, transferase; 1.97A {Deinococcus geothermalis} PDB: 3uer_A* Back     alignment and structure
>1cyg_A Cyclodextrin glucanotransferase; glycosyltransferase; 2.50A {Geobacillus stearothermophilus} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1 Back     alignment and structure
>1ud2_A Amylase, alpha-amylase; calcium-free, alkaline, hydrolase; 2.13A {Bacillus SP} SCOP: b.71.1.1 c.1.8.1 PDB: 1ud4_A 1ud5_A 1ud6_A 1ud8_A 1ud3_A Back     alignment and structure
>3bh4_A Alpha-amylase; calcium, carbohydrate metabolism, glycosidase, hydrolase, metal-binding, secreted; 1.40A {Bacillus amyloliquefaciens} PDB: 1e43_A 1e3z_A* 1e40_A* 1e3x_A 1vjs_A 1ob0_A 1bli_A 1bpl_B 1bpl_A Back     alignment and structure
>3faw_A Reticulocyte binding protein; TIM barrel, beta barrel, hydrolase, cell WALL, peptidoglycan-anchor, secreted; 2.10A {Streptococcus agalactiae COH1} PDB: 3fax_A* Back     alignment and structure
>1mxg_A Alpha amylase; hyperthermostable, family 13 glycosyl hydrola (beta/alpha)8-barrel, hydrolase; HET: ACR ETE; 1.60A {Pyrococcus woesei} SCOP: b.71.1.1 c.1.8.1 PDB: 1mwo_A* 1mxd_A* 3qgv_A* Back     alignment and structure
>1hvx_A Alpha-amylase; hydrolase, glycosyltransferase, thermostability; 2.00A {Geobacillus stearothermophilus} SCOP: b.71.1.1 c.1.8.1 Back     alignment and structure
>1ji1_A Alpha-amylase I; beta/alpha barrel, hydrolase; 1.60A {Thermoactinomyces vulgaris} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 1uh3_A* 2d0f_A* 1izj_A 1uh4_A* 1uh2_A* 2d0g_A* 2d0h_A* 1izk_A Back     alignment and structure
>2ya0_A Putative alkaline amylopullulanase; hydrolase, glycoside hydrolase; 1.85A {Streptococcus pneumoniae} PDB: 2ya2_A* Back     alignment and structure
>1wpc_A Glucan 1,4-alpha-maltohexaosidase; maltohexaose-producing amylase, alpha-amylase, acarbose, HYD; HET: ACI GLC GAL; 1.90A {Bacillus SP} SCOP: b.71.1.1 c.1.8.1 PDB: 1wp6_A* 2d3l_A* 2d3n_A* 2die_A 2gjp_A* 2gjr_A 1w9x_A* Back     alignment and structure
>3a24_A Alpha-galactosidase; glycoside hydrolase family 97, retaining glycosidase; HET: MES; 2.30A {Bacteroides thetaiotaomicron} Back     alignment and structure
>1qho_A Alpha-amylase; glycoside hydrolase, starch degradation; HET: MAL ABD; 1.70A {Geobacillus stearothermophilus} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1 PDB: 1qhp_A* Back     alignment and structure
>4aef_A Neopullulanase (alpha-amylase II); hydrolase, thermostability, high temperature; 2.34A {Pyrococcus furiosus} Back     alignment and structure
>3vgf_A Malto-oligosyltrehalose trehalohydrolase; alpha/beta barrel, alpha-amylas hydrolase; HET: GLC FLC; 2.30A {Sulfolobus solfataricus} PDB: 3vge_A* 3vgd_A* 3vgb_A* 1eh9_A* 3vgh_A* 3vgg_A* 1eha_A Back     alignment and structure
>2ya1_A Putative alkaline amylopullulanase; hydrolase, glycoside hydrolase; HET: BGC GLC; 2.25A {Streptococcus pneumoniae} Back     alignment and structure
>2dh2_A 4F2 cell-surface antigen heavy chain; TIM-barrel, glycosidase like, antiparallel beta-sheet, greek terminal domain, extracellular domain; 2.10A {Homo sapiens} PDB: 2dh3_A Back     alignment and structure
>1r7a_A Sucrose phosphorylase; beta-alpha-barrels, dimer, glycoside hydrolase, transferase; 1.77A {Bifidobacterium adolescentis} SCOP: b.71.1.1 c.1.8.1 PDB: 2gdv_A* 2gdu_A* Back     alignment and structure
>3k8k_A Alpha-amylase, SUSG; alpha8/BETA8 barrel, CBM, beta-sandwich, membrane protein; 2.20A {Bacteroides thetaiotaomicron} PDB: 3k8m_A* 3k8l_A* Back     alignment and structure
>2d73_A Alpha-glucosidase SUSB; glycoside hydrolase family 97, TIM barrel; 1.60A {Bacteroides thetaiotaomicron vpi-5482} PDB: 2zq0_A* 2jke_A* 2jka_A* 2jkp_A* Back     alignment and structure
>2fhf_A Pullulanase; multiple domain, beta-alpha-barrel, alpha-amylase-family, complex with maltotetraose, hydrolase; HET: GLC; 1.65A {Klebsiella aerogenes} SCOP: b.1.18.2 b.1.18.2 b.3.1.3 b.71.1.1 c.1.8.1 PDB: 2fh6_A* 2fh8_A* 2fhb_A* 2fhc_A* 2fgz_A* Back     alignment and structure
>4aio_A Limit dextrinase; hydrolase, pullulanase, glycoside hydrolase family 13; 1.90A {Hordeum vulgare} PDB: 2x4c_A* 2y4s_A* 2y5e_A* 2x4b_A Back     alignment and structure
>1gjw_A Maltodextrin glycosyltransferase; alpha-amylase, maltosyltransferase; HET: MAL GLC; 2.1A {Thermotoga maritima} SCOP: b.71.1.1 c.1.8.1 PDB: 1gju_A* Back     alignment and structure
>1iv8_A Maltooligosyl trehalose synthase; beta alpha barrel, intramolecular transglucosylation, isomerase; HET: MLZ MLY; 1.90A {Sulfolobus acidocaldarius} SCOP: b.71.1.1 c.1.8.1 Back     alignment and structure
>3hje_A 704AA long hypothetical glycosyltransferase; trehalose biosynthesis, maltooligoside trehalose synthase (M family 13 glycoside hydrolases; 1.90A {Sulfolobus tokodaii str} Back     alignment and structure
>3vmn_A Dextranase; TIM barrel, immunoglobrin fold, greek-KEY-motif, glycoside H family 66, hydrolase; 1.60A {Streptococcus mutans} PDB: 3vmo_A* 3vmp_A* Back     alignment and structure
>2zxd_A Alpha-L-fucosidase, putative; TIM barrel, hydrolase; HET: ZXD; 2.15A {Thermotoga maritima} PDB: 2zwy_A* 2zx5_A* 2zx6_A* 2zx7_A* 2zwz_A* 2zx9_A* 2zxa_A* 2zxb_A* 2zx8_A* 1hl9_A* 1hl8_A* 1odu_A* 2wsp_A* Back     alignment and structure
>3tty_A Beta-GAL, beta-galactosidase; TIM barrel, glycoside hydrolase, hydrolase; HET: GLA; 2.25A {Bacillus circulans subsp} PDB: 3tts_A* Back     alignment and structure
>3ues_A Alpha-1,3/4-fucosidase; TIM barrel, hydrolase-hydrolase inhibitor complex; HET: DFU; 1.60A {Bifidobacterium longum subsp} PDB: 3mo4_A* 3uet_A* Back     alignment and structure
>4awe_A Endo-beta-D-1,4-mannanase; hydrolase, endo-mannanase, glycosyl hydrolase, GH5; HET: NAG; 1.40A {Neurospora sitophila} Back     alignment and structure
>1kwg_A Beta-galactosidase; TIM barrel, glycoside hydrolase family 42, trimer, hydrolase; 1.60A {Thermus thermophilus} SCOP: b.71.1.1 c.1.8.1 c.23.16.5 PDB: 1kwk_A* Back     alignment and structure
>2wvv_A Alpha-L-fucosidase; alpha-L-fucose, hydrolase, glycoside hydrolase family 29; 1.73A {Bacteroides thetaiotaomicron} PDB: 2xii_A* 2xib_A* 2wvv_B 2wvt_A* 2wvu_A* 2wvs_A* Back     alignment and structure
>3thd_A Beta-galactosidase; TIM-barrel domain, glycosyl hydrolase, glycosylation, hydrolase; HET: NAG DGJ; 1.79A {Homo sapiens} PDB: 3thc_A* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 307
d2f2ha4338 c.1.8.13 (A:248-585) Putative glucosidase YicI, do 2e-78
d1zy9a2348 c.1.8.13 (A:178-525) Alpha-galactosidase GalA cata 5e-22
>d2f2ha4 c.1.8.13 (A:248-585) Putative glucosidase YicI, domain 2 {Escherichia coli [TaxId: 562]} Length = 338 Back     information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: (Trans)glycosidases
family: YicI catalytic domain-like
domain: Putative glucosidase YicI, domain 2
species: Escherichia coli [TaxId: 562]

 Score =  240 bits (612), Expect = 2e-78
 Identities = 65/290 (22%), Positives = 114/290 (39%), Gaps = 21/290 (7%)

Query: 4   IREFVRTFREKGIPCDVIWMDIDYMDGFRC--FTFDKERFPDPKSLAADLHLNGFKAIWM 61
           +  F+    E+ +P  V   D  +M  F+   F +D   FPDP+ +   L   G K    
Sbjct: 39  VNSFIDGMAERNLPLHVFHFDCFWMKAFQWCDFEWDPLTFPDPEGMIRRLKAKGLKICVW 98

Query: 62  LDPGIKHEDGYFVYDSGSKIDVWIQKADGTPFIGEVWPGPCVFPDYTQSKVRSWWGSLVK 121
           ++P I  +    V+    +    +++ DG+ +  + W       D+T      W+   +K
Sbjct: 99  INPYIGQK--SPVFKELQEKGYLLKRPDGSLWQWDKWQPGLAIYDFTNPDACKWYADKLK 156

Query: 122 DFIYNGVDGIWNDMNEPAVFKSVTKTMPESNIHRGDDEIGGCQNHSYYHNVYGMLMARST 181
             +  GVD    D  E                   D +     +    HN Y  +     
Sbjct: 157 GLVAMGVDCFKTDFGERIPT---------------DVQWFDGSDPQKMHNHYAYIYNELV 201

Query: 182 YEGMKLADKDKRPFVLTRAGFIGSQRYAATWTGDNVSNWEHLHMSISMVLQLGLSGQPFS 241
           +  +K    ++   +  R+  +G+Q++   W GD  +N+E +  S+   L +GLSG  F 
Sbjct: 202 WNVLKDTVGEEEAVLFARSASVGAQKFPVHWGGDCYANYESMAESLRGGLSIGLSGFGFW 261

Query: 242 GPDIGGFDGNATPRLFGRWMGIGAMFPFCRGHTESDAIDHEPWSFGEEVL 291
             DIGGF+  A   ++ RW   G +    R H         PW++ +E  
Sbjct: 262 SHDIGGFENTAPAHVYKRWCAFGLLSSHSRLH--GSKSYRVPWAYDDESC 309
>d1zy9a2 c.1.8.13 (A:178-525) Alpha-galactosidase GalA catalytic domain {Thermotoga maritima [TaxId: 2336]} Length = 348 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query307
d2f2ha4338 Putative glucosidase YicI, domain 2 {Escherichia c 100.0
d1zy9a2348 Alpha-galactosidase GalA catalytic domain {Thermot 99.9
d1szna2314 Melibiase {Trichoderma reesei [TaxId: 51453]} 99.56
d1uasa2273 Melibiase {Rice (Oryza sativa) [TaxId: 4530]} 99.52
d1r46a2292 Melibiase {Human (Homo sapiens) [TaxId: 9606]} 99.34
d1ktba2293 Melibiase {Chicken (Gallus gallus) [TaxId: 9031]} 99.1
d1ua7a2344 Bacterial alpha-amylase {Bacillus subtilis [TaxId: 97.78
d1gcya2357 G4-amylase (1,4-alpha-D-glucan maltotetrahydrolase 97.75
d1jaea2378 Animal alpha-amylase {Yellow mealworm (Tenebrio mo 97.53
d1m53a2 478 Isomaltulose synthase PalI {Klebsiella sp., lx3 [T 97.51
d1ht6a2347 Plant alpha-amylase {Barley (Hordeum vulgare), AMY 97.45
d1uoka2 479 Oligo-1,6, glucosidase {Bacillus cereus [TaxId: 13 97.44
d2bhua3420 Glycosyltrehalose trehalohydrolase, central domain 97.4
d2aaaa2381 Fungal alpha-amylases {Aspergillus niger, acid amy 97.36
d1j0ha3382 Neopullulanase, central domain {Bacillus stearothe 97.32
d1wzaa2409 Bacterial alpha-amylase {Halothermothrix orenii [T 97.3
d1hvxa2393 Bacterial alpha-amylase {Bacillus stearothermophil 97.29
d2guya2381 Fungal alpha-amylases {Aspergillus oryzae, Taka-am 97.28
d1lwha2391 4-alpha-glucanotransferase {Thermotoga maritima [T 97.28
d1h3ga3422 Cyclomaltodextrinase, central domain {Flavobacteri 97.25
d1hx0a2403 Animal alpha-amylase {Pig (Sus scrofa) [TaxId: 982 97.22
d1eh9a3400 Glycosyltrehalose trehalohydrolase, central domain 97.1
d1wzla3382 Maltogenic amylase, central domain {Thermoactinomy 97.06
d2d3na2394 Bacterial alpha-amylase {Bacillus sp. 707 [TaxId: 97.04
d1g94a2354 Bacterial alpha-amylase {Pseudoalteromonas halopla 96.97
d1m7xa3396 1,4-alpha-glucan branching enzyme, central domain 96.95
d1qhoa4407 Cyclodextrin glycosyltransferase {Bacillus stearot 96.94
d1g5aa2554 Amylosucrase {Neisseria polysaccharea [TaxId: 489] 96.92
d1bf2a3475 Isoamylase, central domain {Pseudomonas amyloderam 96.89
d3bmva4406 Cyclodextrin glycosyltransferase {Thermoanaerobact 96.8
d1e43a2393 Bacterial alpha-amylase {Chimera (Bacillus amyloli 96.7
d1ea9c3382 Maltogenic amylase, central domain {Bacillus sp., 96.51
d2aama1285 Hypothetical protein TM1410 {Thermotoga maritima [ 96.23
d1mxga2361 Bacterial alpha-amylase {Archaeon Pyrococcus woese 94.84
d1ud2a2390 Bacterial alpha-amylase {Bacillus sp., ksm-k38 [Ta 94.67
d2fhfa5 563 Pullulanase PulA {Klebsiella pneumoniae [TaxId: 57 92.54
d1hl9a2350 Putative alpha-L-fucosidase, catalytic domain {The 90.03
d1r7aa2434 Sucrose phosphorylase {Bifidobacterium adolescenti 88.96
d1qnra_344 Beta-mannanase {Trichoderma reesei [TaxId: 51453]} 87.57
d1ji1a3432 Maltogenic amylase, central domain {Thermoactinomy 85.1
d1kwga2393 A4 beta-galactosidase {Thermus thermophilus [TaxId 84.08
d1iv8a2 653 Maltooligosyl trehalose synthase {Archaeon Sulfolo 80.63
>d2f2ha4 c.1.8.13 (A:248-585) Putative glucosidase YicI, domain 2 {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: (Trans)glycosidases
family: YicI catalytic domain-like
domain: Putative glucosidase YicI, domain 2
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=3.6e-74  Score=529.38  Aligned_cols=286  Identities=22%  Similarity=0.448  Sum_probs=263.0

Q ss_pred             hHHHHHHHHHHHcCCCcceEEecccccCCc--ceeeecCCCCCChHHHHHHHHHCCCeEEeecCCccccCCCcccccccc
Q 021825            2 ILIREFVRTFREKGIPCDVIWMDIDYMDGF--RCFTFDKERFPDPKSLAADLHLNGFKAIWMLDPGIKHEDGYFVYDSGS   79 (307)
Q Consensus         2 ~~v~~~~~~~~~~~iP~d~i~lD~~w~~~~--~~f~~d~~~FPd~~~~~~~l~~~G~k~~~~~~P~i~~~~~~~~~~~~~   79 (307)
                      ++|+++++++|+++||||+|+||++|+++.  ++|+||+++||||++|+++||++|+|+++|++|+|..++.  .|+++.
T Consensus        37 ~~v~~~~~~~r~~~iP~d~i~iD~~w~~~~~~~~f~~d~~~FPdp~~~i~~l~~~G~~~~l~~~P~i~~~~~--~~~~~~  114 (338)
T d2f2ha4          37 ATVNSFIDGMAERNLPLHVFHFDCFWMKAFQWCDFEWDPLTFPDPEGMIRRLKAKGLKICVWINPYIGQKSP--VFKELQ  114 (338)
T ss_dssp             HHHHHHHHHHHHTTCCCCEEEECGGGBCTTCCSSCCBCTTTCSCHHHHHHHHHHTTCEEEEEECSEECTTST--THHHHH
T ss_pred             HHHHHHHHHHHHcCCCcceEEEcCchhcCCCcCceeeCcccCCCHHHHHHHHHHCCCeEEEeecCccCCCCh--hHHHHH
Confidence            469999999999999999999999999854  6899999999999999999999999999999999988764  688899


Q ss_pred             ccceeEEcCCCCceeeeecCCCccCCCCCChHHHHHHHHHHHHHhhcCccEEEecCCCCcccCCCCCCCCCCcccCCCCC
Q 021825           80 KIDVWIQKADGTPFIGEVWPGPCVFPDYTQSKVRSWWGSLVKDFIYNGVDGIWNDMNEPAVFKSVTKTMPESNIHRGDDE  159 (307)
Q Consensus        80 ~~~~~~~~~~g~~~~~~~w~g~~~~~Dftnp~a~~ww~~~l~~l~~~Gvdg~w~D~~e~~~~~~~~~~~p~~~~~~~~~~  159 (307)
                      ++++++++++|+++.+.+|++..+++|||||++++||.+.++.+++.||||||+|++|+..+         +..+...  
T Consensus       115 ~~g~~~~~~~g~~~~~~~~~~~~~~~D~tnp~a~~w~~~~~~~~~~~Gidg~w~D~~e~~~~---------d~~~~~~--  183 (338)
T d2f2ha4         115 EKGYLLKRPDGSLWQWDKWQPGLAIYDFTNPDACKWYADKLKGLVAMGVDCFKTDFGERIPT---------DVQWFDG--  183 (338)
T ss_dssp             HHTCBCBCTTSSBCCBSSSSTTBEEBCTTSHHHHHHHHHHHHHHHHTTCCEEEECCCCCCCS---------SSBCTTC--
T ss_pred             hCCEEEECCCCCceeeecCCCCccccccCCHHHHHHHHHHhhcccccCCceEEecCCCCCCC---------ccccccC--
Confidence            99999999999999999999999999999999999999999999999999999999997432         2222111  


Q ss_pred             CCCccccccccchhHHHHHHHHHHHHHhhcCCCCcEEEEccccCCCCcceeeecCCCCCCchHHHHHHHHHHHhcccCCC
Q 021825          160 IGGCQNHSYYHNVYGMLMARSTYEGMKLADKDKRPFVLTRAGFIGSQRYAATWTGDNVSNWEHLHMSISMVLQLGLSGQP  239 (307)
Q Consensus       160 ~~~~~~~~~~hn~y~~~~~~~~~~~~~~~~~~~r~~~~sRs~~~G~qr~~~~w~GD~~s~W~~L~~~i~~~l~~~l~G~p  239 (307)
                          ..+..+||.|++++++++++++++..+.+|+++++||+++|+|||+++|+||+.++|++||.+|+.+|++|++|+|
T Consensus       184 ----~~~~~~~n~y~~~~~~~~~~~~~~~~~~~r~~~~~rs~~~Gsqry~~~W~GD~~s~w~~L~~~i~~~l~~~l~G~p  259 (338)
T d2f2ha4         184 ----SDPQKMHNHYAYIYNELVWNVLKDTVGEEEAVLFARSASVGAQKFPVHWGGDCYANYESMAESLRGGLSIGLSGFG  259 (338)
T ss_dssp             ----CCHHHHHHHHHHHHHHHHHHHHHTTTCGGGCCEEESCBCTTGGGSCCEECCCCCSSHHHHHHHHHHHHHHHTTTCC
T ss_pred             ----cchhhhcchhHHHHHHHHHHHHHHhccccccceeeccccccccccceEecCCCCCChHHHHHHHHHHHHHHHcCCC
Confidence                1456799999999999999999988878999999999999999999999999999999999999999999999999


Q ss_pred             cccccCCCCCCCCChhHHHHHHHhhhhcccccccCCCCCCCCCccccChhhHHHHHHHH-----HHhhhhhc
Q 021825          240 FSGPDIGGFDGNATPRLFGRWMGIGAMFPFCRGHTESDAIDHEPWSFGEEVLFCSSIVI-----IAFFWFKL  306 (307)
Q Consensus       240 ~~g~DigGf~~~~~~EL~~RW~Q~~af~P~~r~h~~~~~~~~~Pw~~~~~~~~~~r~~i-----~l~~~~~~  306 (307)
                      ++|+|||||.+++++|||+||+|+|+|+|+||+|+..  .+++||.|++++++++|+++     +|||+||+
T Consensus       260 ~~g~DigGf~~~~~~EL~~RW~q~~~f~P~~r~h~~~--~~~~Pw~~~~~~~~~~r~~~~lRy~LlPY~Ys~  329 (338)
T d2f2ha4         260 FWSHDIGGFENTAPAHVYKRWCAFGLLSSHSRLHGSK--SYRVPWAYDDESCDVVRFFTQLKCRMMPYLYRE  329 (338)
T ss_dssp             CEEEETTCSSSCCCHHHHHHHHHHHHTSSEEEECCSS--SCCCGGGTCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ccCCCcCCCCCCCCHHHHHHHHHHHhcchheecCCCC--CCCCCccCChHHHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999999999999999999999999975  57999999999999999998     77899986
>d1zy9a2 c.1.8.13 (A:178-525) Alpha-galactosidase GalA catalytic domain {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1szna2 c.1.8.1 (A:1-314) Melibiase {Trichoderma reesei [TaxId: 51453]} Back     information, alignment and structure
>d1uasa2 c.1.8.1 (A:1-273) Melibiase {Rice (Oryza sativa) [TaxId: 4530]} Back     information, alignment and structure
>d1r46a2 c.1.8.1 (A:32-323) Melibiase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1ktba2 c.1.8.1 (A:1-293) Melibiase {Chicken (Gallus gallus) [TaxId: 9031]} Back     information, alignment and structure
>d1ua7a2 c.1.8.1 (A:4-347) Bacterial alpha-amylase {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1gcya2 c.1.8.1 (A:1-357) G4-amylase (1,4-alpha-D-glucan maltotetrahydrolase) {Pseudomonas stutzeri [TaxId: 316]} Back     information, alignment and structure
>d1jaea2 c.1.8.1 (A:1-378) Animal alpha-amylase {Yellow mealworm (Tenebrio molitor), larva [TaxId: 7067]} Back     information, alignment and structure
>d1m53a2 c.1.8.1 (A:43-520) Isomaltulose synthase PalI {Klebsiella sp., lx3 [TaxId: 576]} Back     information, alignment and structure
>d1ht6a2 c.1.8.1 (A:1-347) Plant alpha-amylase {Barley (Hordeum vulgare), AMY1 isozyme [TaxId: 4513]} Back     information, alignment and structure
>d1uoka2 c.1.8.1 (A:1-479) Oligo-1,6, glucosidase {Bacillus cereus [TaxId: 1396]} Back     information, alignment and structure
>d2bhua3 c.1.8.1 (A:111-530) Glycosyltrehalose trehalohydrolase, central domain {Deinococcus radiodurans [TaxId: 1299]} Back     information, alignment and structure
>d2aaaa2 c.1.8.1 (A:1-381) Fungal alpha-amylases {Aspergillus niger, acid amylase [TaxId: 5061]} Back     information, alignment and structure
>d1j0ha3 c.1.8.1 (A:124-505) Neopullulanase, central domain {Bacillus stearothermophilus [TaxId: 1422]} Back     information, alignment and structure
>d1wzaa2 c.1.8.1 (A:28-436) Bacterial alpha-amylase {Halothermothrix orenii [TaxId: 31909]} Back     information, alignment and structure
>d1hvxa2 c.1.8.1 (A:1-393) Bacterial alpha-amylase {Bacillus stearothermophilus [TaxId: 1422]} Back     information, alignment and structure
>d2guya2 c.1.8.1 (A:1-381) Fungal alpha-amylases {Aspergillus oryzae, Taka-amylase [TaxId: 5062]} Back     information, alignment and structure
>d1lwha2 c.1.8.1 (A:1-391) 4-alpha-glucanotransferase {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1h3ga3 c.1.8.1 (A:96-517) Cyclomaltodextrinase, central domain {Flavobacterium sp. 92 [TaxId: 197856]} Back     information, alignment and structure
>d1hx0a2 c.1.8.1 (A:1-403) Animal alpha-amylase {Pig (Sus scrofa) [TaxId: 9823]} Back     information, alignment and structure
>d1eh9a3 c.1.8.1 (A:91-490) Glycosyltrehalose trehalohydrolase, central domain {Archaeon Sulfolobus solfataricus, km1 [TaxId: 2287]} Back     information, alignment and structure
>d1wzla3 c.1.8.1 (A:121-502) Maltogenic amylase, central domain {Thermoactinomyces vulgaris, TVAII [TaxId: 2026]} Back     information, alignment and structure
>d2d3na2 c.1.8.1 (A:5-398) Bacterial alpha-amylase {Bacillus sp. 707 [TaxId: 1416]} Back     information, alignment and structure
>d1g94a2 c.1.8.1 (A:1-354) Bacterial alpha-amylase {Pseudoalteromonas haloplanktis (Alteromonas haloplanktis) [TaxId: 228]} Back     information, alignment and structure
>d1m7xa3 c.1.8.1 (A:227-622) 1,4-alpha-glucan branching enzyme, central domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1qhoa4 c.1.8.1 (A:1-407) Cyclodextrin glycosyltransferase {Bacillus stearothermophilus, maltogenic alpha-amylase [TaxId: 1422]} Back     information, alignment and structure
>d1g5aa2 c.1.8.1 (A:1-554) Amylosucrase {Neisseria polysaccharea [TaxId: 489]} Back     information, alignment and structure
>d1bf2a3 c.1.8.1 (A:163-637) Isoamylase, central domain {Pseudomonas amyloderamosa [TaxId: 32043]} Back     information, alignment and structure
>d3bmva4 c.1.8.1 (A:1-406) Cyclodextrin glycosyltransferase {Thermoanaerobacterium [TaxId: 28895]} Back     information, alignment and structure
>d1e43a2 c.1.8.1 (A:1-393) Bacterial alpha-amylase {Chimera (Bacillus amyloliquefaciens) and (Bacillus licheniformis) [TaxId: 1390]} Back     information, alignment and structure
>d1ea9c3 c.1.8.1 (C:122-503) Maltogenic amylase, central domain {Bacillus sp., cyclomaltodextrinase [TaxId: 1409]} Back     information, alignment and structure
>d2aama1 c.1.8.15 (A:28-312) Hypothetical protein TM1410 {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1mxga2 c.1.8.1 (A:1-361) Bacterial alpha-amylase {Archaeon Pyrococcus woesei [TaxId: 2262]} Back     information, alignment and structure
>d1ud2a2 c.1.8.1 (A:1-390) Bacterial alpha-amylase {Bacillus sp., ksm-k38 [TaxId: 1409]} Back     information, alignment and structure
>d2fhfa5 c.1.8.1 (A:403-965) Pullulanase PulA {Klebsiella pneumoniae [TaxId: 573]} Back     information, alignment and structure
>d1hl9a2 c.1.8.11 (A:7-356) Putative alpha-L-fucosidase, catalytic domain {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1r7aa2 c.1.8.1 (A:1-434) Sucrose phosphorylase {Bifidobacterium adolescentis [TaxId: 1680]} Back     information, alignment and structure
>d1qnra_ c.1.8.3 (A:) Beta-mannanase {Trichoderma reesei [TaxId: 51453]} Back     information, alignment and structure
>d1ji1a3 c.1.8.1 (A:123-554) Maltogenic amylase, central domain {Thermoactinomyces vulgaris, TVAI [TaxId: 2026]} Back     information, alignment and structure
>d1kwga2 c.1.8.1 (A:1-393) A4 beta-galactosidase {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1iv8a2 c.1.8.1 (A:1-653) Maltooligosyl trehalose synthase {Archaeon Sulfolobus acidocaldarius [TaxId: 2285]} Back     information, alignment and structure