Citrus Sinensis ID: 021841

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------
MGTKAVFLLLALLSFSAVSLRSALAENEEDPGLVMNFYKDTCPQAEDIIREQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEMDRSFGMRNFRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLYPEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLATDKRTRPYVKKMAKSQDYFFKEFSRAITLLSENNPLTGTKGEIRKVCNLANKLHDKS
ccHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccHHHHHHHHHHHHHHHccccHHHHHHHHHccccccccccccccccccccccccccccccccccccHHHHHcccccccccccccccHHccHHHHHcccccccccHHHHHHHHHHccccccccHHccccccccccccccccccccccccccccHHHHHHHHHccccccccccccccccccccccHHccHHHHHHHHcccccccccHHHHcccccHHHHHHHHccHHHHHHHHHHHHHHHccccccccccccccccccccccccccc
cccHHHHHHHHHHHHHHHHHHHHHcccccccccEccccccccccHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHccccccHHHccccccccccccccHHHccccccccEEEcccccccccccccccccccHHHHHcccccccccHHHHHHHHHHccccHHHHHHHccccHccccHHHHHHHHHcccccccccHHHHHHHHHHccccccccccccccccccccccccccHHHHHHHccccccHHHHHHHHccccHHHHHHHHHcHHHHHHHHHHHHHHHcccccEEHHHcEccccccccccccccc
MGTKAVFLLLALLSFSAVSLRSALaeneedpglvmnfykdtcpqAEDIIREQVKLLYKRHKNTAFSWLRNIFhdcavqscdaslLLDSTRKTLSEKEMDRSFGMRNFRDGVValggpyiplktgrrdgrKSRAEILEQylpdhndsMSVVLERFAAIGIDAPGLVALLgshsvgrthcVKLVHrlypevdpalnpdhvphmlhkcpdaipdpkavqyvrndrgtpmvldnnyyrnildnkglmmvdhqlatdkrtrpyvKKMAKSQDYFFKEFSRAITLLsennpltgtkgEIRKVCNLANKLHDKS
MGTKAVFLLLALLSFSAVSLRSALAeneedpglVMNFYKDTCPQAEDIIREQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLsekemdrsfgmrnfrdgvvalggpyiplktgrrdgrkSRAEILEqylpdhndSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLYPEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNdrgtpmvldnNYYRNILDNKGLMMVDHQLatdkrtrpyvKKMAKSQDYFFKEFSRAITLLsennpltgtkgeiRKVCNLANKLHDKS
MGTKavflllallsfsavslrsalaENEEDPGLVMNFYKDTCPQAEDIIREQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEMDRSFGMRNFRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLYPEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLATDKRTRPYVKKMAKSQDYFFKEFSRAITLLSENNPLTGTKGEIRKVCNLANKLHDKS
****AVFLLLALLSFSAVSLRSALAENEEDPGLVMNFYKDTCPQAEDIIREQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLD**************FGMRNFRDGVVALGGPYIPLKT***********ILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLYPEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLATDKRTRPYVKKMAKSQDYFFKEFSRAITLLSENNPLTGTKGEIRKVCNL********
*****VFLLLALLSFSAVSLRSALAENEEDPGLVMNFYKDTCPQAEDIIREQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKT***KEMDRSFGMRNFRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLYPEVDPALNPDHVPHMLHKCP******KAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLATDKRTRPYVKKMAKSQDYFFKEFSRAITLLSENNPLTGTKGEIRKVCN***K*****
MGTKAVFLLLALLSFSAVSLRSALAENEEDPGLVMNFYKDTCPQAEDIIREQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEMDRSFGMRNFRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLYPEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLATDKRTRPYVKKMAKSQDYFFKEFSRAITLLSENNPLTGTKGEIRKVCNLANKLHDKS
***KAVFLLLALLSFSAVSLRSALAENEEDPGLVMNFYKDTCPQAEDIIREQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEMDRSFGMRNFRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLYPEVDPALNPDHVPHMLHKCPDAIP***AVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLATDKRTRPYVKKMAKSQDYFFKEFSRAITLLSENNPLTGTKGEIRKVCN*********
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
SSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MGTKAVFLLLALLSFSAVSLRSALAENEEDPGLVMNFYKDTCPQAEDIIREQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEMDRSFGMRNFRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLYPEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLATDKRTRPYVKKMAKSQDYFFKEFSRAITLLSENNPLTGTKGEIRKVCNLANKLHDKS
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query307 2.2.26 [Sep-21-2011]
Q9SB81330 Peroxidase 42 OS=Arabidop yes no 0.983 0.915 0.746 1e-144
Q42580327 Peroxidase 21 OS=Arabidop no no 0.876 0.822 0.536 3e-90
Q9FL16328 Peroxidase 63 OS=Arabidop no no 0.869 0.814 0.324 6e-41
P84516362 Cationic peroxidase SPC4 N/A no 0.866 0.734 0.335 1e-40
Q9LHA7316 Peroxidase 31 OS=Arabidop no no 0.866 0.841 0.337 7e-39
Q96520358 Peroxidase 12 OS=Arabidop no no 0.951 0.815 0.328 7e-39
Q9LSP0339 Peroxidase 29 OS=Arabidop no no 0.941 0.852 0.295 3e-38
Q9SI17337 Peroxidase 14 OS=Arabidop no no 0.960 0.875 0.302 3e-38
O81755404 Putative Peroxidase 48 OS no no 0.905 0.688 0.288 4e-38
Q9SI16338 Peroxidase 15 OS=Arabidop no no 0.853 0.775 0.313 7e-38
>sp|Q9SB81|PER42_ARATH Peroxidase 42 OS=Arabidopsis thaliana GN=PER42 PE=1 SV=2 Back     alignment and function desciption
 Score =  511 bits (1315), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 248/332 (74%), Positives = 275/332 (82%), Gaps = 30/332 (9%)

Query: 1   MGTKAVFLLLALLSFSAVSLRSALAENEEDPGLVMNFYKDTCPQAEDIIREQVKLLYKRH 60
           MG K V +++A+L   A+S  S  A  E +PGL+MNFYKDTCPQAEDI+REQVKLLYKRH
Sbjct: 1   MGGKGV-MMVAILCLWALSATSE-AVTEAEPGLMMNFYKDTCPQAEDIVREQVKLLYKRH 58

Query: 61  KNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEMDRSFGMRNF------------- 107
           KNTAFSWLRNIFHDCAV+SCDASLLLDSTR+ L EKE DRSFG+RNF             
Sbjct: 59  KNTAFSWLRNIFHDCAVESCDASLLLDSTRRELGEKEHDRSFGLRNFRYIEEIKEALERE 118

Query: 108 ---------------RDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLE 152
                          R+G+ A+GGPYIPLKTGRRDG KSR ++LE YLPDHN+S+SVVLE
Sbjct: 119 CPGVVSCSDILVLSAREGIEAVGGPYIPLKTGRRDGLKSRTDMLESYLPDHNESISVVLE 178

Query: 153 RFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLYPEVDPALNPDHVPHMLHKCPDAIPDP 212
           +F +IGID PGLVALLGSHSVGRTHCVKLVHRLYPEVDP+LNPDHVPHMLHKCPD+IPDP
Sbjct: 179 KFKSIGIDTPGLVALLGSHSVGRTHCVKLVHRLYPEVDPSLNPDHVPHMLHKCPDSIPDP 238

Query: 213 KAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLATDKRTRPYVKKMAKSQDYFFKE 272
           KAVQYVRNDRGTPMVLDNNYYRNILDNKGL++VDHQLA DKRTRP VKKMAK Q YFFKE
Sbjct: 239 KAVQYVRNDRGTPMVLDNNYYRNILDNKGLLLVDHQLAHDKRTRPIVKKMAKDQAYFFKE 298

Query: 273 FSRAITLLSENNPLTGTKGEIRKVCNLANKLH 304
           F+RAI +LSENNPLTG+KGEIRK CNLANK H
Sbjct: 299 FTRAIQILSENNPLTGSKGEIRKQCNLANKNH 330
Might function as heat shock-like defense protein.
Arabidopsis thaliana (taxid: 3702)
EC: 1EC: .EC: 1EC: 1EC: .EC: 1EC: .EC: 7
>sp|Q42580|PER21_ARATH Peroxidase 21 OS=Arabidopsis thaliana GN=PER21 PE=1 SV=1 Back     alignment and function description
>sp|Q9FL16|PER63_ARATH Peroxidase 63 OS=Arabidopsis thaliana GN=PER63 PE=2 SV=1 Back     alignment and function description
>sp|P84516|PER1_SORBI Cationic peroxidase SPC4 OS=Sorghum bicolor GN=SORBIDRAFT_03g046810 PE=1 SV=2 Back     alignment and function description
>sp|Q9LHA7|PER31_ARATH Peroxidase 31 OS=Arabidopsis thaliana GN=PER31 PE=2 SV=1 Back     alignment and function description
>sp|Q96520|PER12_ARATH Peroxidase 12 OS=Arabidopsis thaliana GN=PER12 PE=1 SV=1 Back     alignment and function description
>sp|Q9LSP0|PER29_ARATH Peroxidase 29 OS=Arabidopsis thaliana GN=PER29 PE=2 SV=2 Back     alignment and function description
>sp|Q9SI17|PER14_ARATH Peroxidase 14 OS=Arabidopsis thaliana GN=PER14 PE=3 SV=1 Back     alignment and function description
>sp|O81755|PER48_ARATH Putative Peroxidase 48 OS=Arabidopsis thaliana GN=PER48 PE=2 SV=3 Back     alignment and function description
>sp|Q9SI16|PER15_ARATH Peroxidase 15 OS=Arabidopsis thaliana GN=PER15 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query307
224076226331 predicted protein [Populus trichocarpa] 0.986 0.915 0.798 1e-155
290760238332 peroxidase [Bruguiera gymnorhiza] 0.986 0.912 0.783 1e-152
167367332 peroxidase [Gossypium hirsutum] 0.977 0.903 0.786 1e-152
251826416337 peroxidase [Camellia oleifera] 0.986 0.899 0.775 1e-150
125620184331 cationic peroxidase [Nelumbo nucifera] 0.986 0.915 0.768 1e-149
341819281338 class III peroxidase [Hevea brasiliensis 0.915 0.831 0.815 1e-149
225444515334 PREDICTED: peroxidase 42 isoform 1 [Viti 0.938 0.862 0.804 1e-148
307136213331 peroxidase [Cucumis melo subsp. melo] 0.938 0.870 0.797 1e-148
402228004330 peroxidase [Fragaria x ananassa] 0.905 0.842 0.810 1e-148
428135690336 peroxidase 4 [Pyrus pyrifolia] 0.921 0.842 0.803 1e-147
>gi|224076226|ref|XP_002304909.1| predicted protein [Populus trichocarpa] gi|118487860|gb|ABK95753.1| unknown [Populus trichocarpa] gi|222847873|gb|EEE85420.1| predicted protein [Populus trichocarpa] gi|225626261|gb|ACN97180.1| peroxidase [Populus trichocarpa] Back     alignment and taxonomy information
 Score =  553 bits (1424), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 265/332 (79%), Positives = 291/332 (87%), Gaps = 29/332 (8%)

Query: 1   MGTKAVFLLLALLSFSAVSLRSALAENEEDPGLVMNFYKDTCPQAEDIIREQVKLLYKRH 60
           M  KA+F   ALLSFSAVS+R ALAENEEDPGLVMNFYKDTCPQAEDI++EQV+LLYKRH
Sbjct: 1   MDAKALFFF-ALLSFSAVSVRPALAENEEDPGLVMNFYKDTCPQAEDIVKEQVRLLYKRH 59

Query: 61  KNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEMDRSFGMRNF------------- 107
           KNTAFSWLRNIFHDCAVQSCDASLLLDSTR+TLSEKE DRSFG+RNF             
Sbjct: 60  KNTAFSWLRNIFHDCAVQSCDASLLLDSTRRTLSEKETDRSFGLRNFRYFDDIKEAVERE 119

Query: 108 ---------------RDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLE 152
                          RDG+V+LGGP+IPLKTGRRDGRKSRA+++E YLPDHN+S+SVVL+
Sbjct: 120 CPGVVSCADILVLSARDGIVSLGGPHIPLKTGRRDGRKSRADVIEDYLPDHNESISVVLD 179

Query: 153 RFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLYPEVDPALNPDHVPHMLHKCPDAIPDP 212
           RFA++GID PGLVALLG+HSVGRTHCVKLVHRLYPEVDPALNPDHV HML+KCPD+IPDP
Sbjct: 180 RFASMGIDTPGLVALLGAHSVGRTHCVKLVHRLYPEVDPALNPDHVEHMLYKCPDSIPDP 239

Query: 213 KAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLATDKRTRPYVKKMAKSQDYFFKE 272
           KAVQYVRNDRGTPMVLDNNYYRNILDNKGL++VDHQLATDKRT+PYVKKMAKSQDYFFKE
Sbjct: 240 KAVQYVRNDRGTPMVLDNNYYRNILDNKGLLIVDHQLATDKRTKPYVKKMAKSQDYFFKE 299

Query: 273 FSRAITLLSENNPLTGTKGEIRKVCNLANKLH 304
           FSRAIT+LSENNPLTGTKGEIRK C +ANK H
Sbjct: 300 FSRAITILSENNPLTGTKGEIRKQCTVANKHH 331

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|290760238|gb|ADD54644.1| peroxidase [Bruguiera gymnorhiza] Back     alignment and taxonomy information
>gi|167367|gb|AAA99868.1| peroxidase [Gossypium hirsutum] Back     alignment and taxonomy information
>gi|251826416|gb|ACT21094.1| peroxidase [Camellia oleifera] Back     alignment and taxonomy information
>gi|125620184|gb|ABN46984.1| cationic peroxidase [Nelumbo nucifera] Back     alignment and taxonomy information
>gi|341819281|gb|AEK87128.1| class III peroxidase [Hevea brasiliensis] Back     alignment and taxonomy information
>gi|225444515|ref|XP_002274769.1| PREDICTED: peroxidase 42 isoform 1 [Vitis vinifera] gi|147768417|emb|CAN60224.1| hypothetical protein VITISV_039918 [Vitis vinifera] Back     alignment and taxonomy information
>gi|307136213|gb|ADN34050.1| peroxidase [Cucumis melo subsp. melo] Back     alignment and taxonomy information
>gi|402228004|gb|AFQ36035.1| peroxidase [Fragaria x ananassa] Back     alignment and taxonomy information
>gi|428135690|gb|AFY97687.1| peroxidase 4 [Pyrus pyrifolia] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query307
TAIR|locus:2141637330 PRXR1 [Arabidopsis thaliana (t 0.641 0.596 0.852 1.8e-131
TAIR|locus:2061794327 AT2G37130 [Arabidopsis thalian 0.631 0.593 0.569 1e-84
TAIR|locus:2173757328 AT5G40150 [Arabidopsis thalian 0.625 0.585 0.360 1.2e-41
TAIR|locus:2098308316 AT3G28200 [Arabidopsis thalian 0.622 0.604 0.371 1.4e-40
TAIR|locus:2013001358 AT1G71695 [Arabidopsis thalian 0.618 0.530 0.364 4e-39
TAIR|locus:2129386326 AT4G17690 [Arabidopsis thalian 0.631 0.595 0.358 8.3e-39
TAIR|locus:2086047339 AT3G17070 [Arabidopsis thalian 0.618 0.560 0.321 8.3e-39
TAIR|locus:2053129338 AT2G18150 [Arabidopsis thalian 0.622 0.565 0.315 1.7e-38
TAIR|locus:2053139337 AT2G18140 [Arabidopsis thalian 0.618 0.563 0.328 2.2e-38
TAIR|locus:2080928344 AT3G50990 [Arabidopsis thalian 0.628 0.561 0.343 3.5e-38
TAIR|locus:2141637 PRXR1 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 919 (328.6 bits), Expect = 1.8e-131, Sum P(2) = 1.8e-131
 Identities = 168/197 (85%), Positives = 184/197 (93%)

Query:   108 RDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVAL 167
             R+G+ A+GGPYIPLKTGRRDG KSR ++LE YLPDHN+S+SVVLE+F +IGID PGLVAL
Sbjct:   134 REGIEAVGGPYIPLKTGRRDGLKSRTDMLESYLPDHNESISVVLEKFKSIGIDTPGLVAL 193

Query:   168 LGSHSVGRTHCVKLVHRLYPEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMV 227
             LGSHSVGRTHCVKLVHRLYPEVDP+LNPDHVPHMLHKCPD+IPDPKAVQYVRNDRGTPMV
Sbjct:   194 LGSHSVGRTHCVKLVHRLYPEVDPSLNPDHVPHMLHKCPDSIPDPKAVQYVRNDRGTPMV 253

Query:   228 LDNNYYRNILDNKGLMMVDHQLATDKRTRPYVKKMAKSQDYFFKEFSRAITLLSENNPLT 287
             LDNNYYRNILDNKGL++VDHQLA DKRTRP VKKMAK Q YFFKEF+RAI +LSENNPLT
Sbjct:   254 LDNNYYRNILDNKGLLLVDHQLAHDKRTRPIVKKMAKDQAYFFKEFTRAIQILSENNPLT 313

Query:   288 GTKGEIRKVCNLANKLH 304
             G+KGEIRK CNLANK H
Sbjct:   314 GSKGEIRKQCNLANKNH 330
GO:0004601 "peroxidase activity" evidence=IEA;ISS
GO:0005576 "extracellular region" evidence=ISM
GO:0006979 "response to oxidative stress" evidence=IEA
GO:0020037 "heme binding" evidence=IEA
GO:0055114 "oxidation-reduction process" evidence=IEA
GO:0006833 "water transport" evidence=RCA
GO:0009651 "response to salt stress" evidence=RCA
GO:0009750 "response to fructose stimulus" evidence=RCA
GO:0019344 "cysteine biosynthetic process" evidence=RCA
GO:0019761 "glucosinolate biosynthetic process" evidence=RCA
GO:0030003 "cellular cation homeostasis" evidence=RCA
GO:0070838 "divalent metal ion transport" evidence=RCA
TAIR|locus:2061794 AT2G37130 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2173757 AT5G40150 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2098308 AT3G28200 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2013001 AT1G71695 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2129386 AT4G17690 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2086047 AT3G17070 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2053129 AT2G18150 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2053139 AT2G18140 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2080928 AT3G50990 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q9SB81PER42_ARATH1, ., 1, 1, ., 1, ., 70.74690.98370.9151yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
4th Layer1.11.1.70.979
3rd Layer1.11.10.983

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
PO1
SubName- Full=Putative uncharacterized protein; (331 aa)
(Populus trichocarpa)
Predicted Functional Partners:
gw1.XIV.3012.1
aspartate transaminase (EC-2.6.1.1) (403 aa)
     •  0.899
gw1.VI.2755.1
aspartate transaminase (EC-2.6.1.1) (397 aa)
     •  0.899
gw1.41.216.1
histidinol-phosphate aminotransferase (366 aa)
     •  0.899
gw1.28.655.1
annotation not avaliable (78 aa)
     •  0.899
f5h
SubName- Full=Ferulate-5-hydroxylase; Flags- Precursor; (501 aa)
     •  0.899
grail3.0013044701
aspartate transaminase (EC-2.6.1.1) (466 aa)
     •  0.899
PAL
RecName- Full=Phenylalanine ammonia-lyase; EC=4.3.1.24;; This is a key enzyme of plant metaboli [...] (715 aa)
     •  0.899
SAD
SubName- Full=Cinnamyl alcohol dehydrogenase; (362 aa)
     •  0.899
fgenesh4_pg.C_scaffold_803000002
hypothetical protein (316 aa)
     •  0.899
AMT7
aminotransferase family protein (EC-2.6.1.5) (407 aa)
     •  0.899

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query307
cd00693298 cd00693, secretory_peroxidase, Horseradish peroxid 1e-115
PLN03030324 PLN03030, PLN03030, cationic peroxidase; Provision 4e-47
pfam00141180 pfam00141, peroxidase, Peroxidase 2e-30
cd00691253 cd00691, ascorbate_peroxidase, Ascorbate peroxidas 2e-16
cd00314255 cd00314, plant_peroxidase_like, Heme-dependent per 2e-15
PLN02608289 PLN02608, PLN02608, L-ascorbate peroxidase 5e-09
cd00692328 cd00692, ligninase, Ligninase and other manganese- 8e-09
PLN02879251 PLN02879, PLN02879, L-ascorbate peroxidase 1e-08
PLN02364250 PLN02364, PLN02364, L-ascorbate peroxidase 1 4e-08
pfam00141180 pfam00141, peroxidase, Peroxidase 1e-05
cd08201264 cd08201, plant_peroxidase_like_1, Uncharacterized 0.002
>gnl|CDD|173827 cd00693, secretory_peroxidase, Horseradish peroxidase and related secretory plant peroxidases Back     alignment and domain information 
 Score =  334 bits (859), Expect = e-115
 Identities = 112/300 (37%), Positives = 150/300 (50%), Gaps = 37/300 (12%)

Query: 32  GLVMNFYKDTCPQAEDIIREQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRK 91
            L + FY  +CP AE I+R  V+   K     A + LR  FHDC V+ CDAS+LLDST  
Sbjct: 1   QLSVGFYSKSCPNAESIVRSVVRAAVKADPRLAAALLRLHFHDCFVRGCDASVLLDSTAN 60

Query: 92  TLSEKEMDRSFGMRNF----------------------------RDGVVALGGPYIPLKT 123
             SEK+   +  +R F                            RD VV  GGP   +  
Sbjct: 61  NTSEKDAPPNLSLRGFDVIDDIKAALEAACPGVVSCADILALAARDAVVLAGGPSYEVPL 120

Query: 124 GRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVH 183
           GRRDGR S A      LP    S+S ++  FA+ G+    LVAL G+H++GR HC     
Sbjct: 121 GRRDGRVSSAN-DVGNLPSPFFSVSQLISLFASKGLTVTDLVALSGAHTIGRAHCSSFSD 179

Query: 184 RLYP-----EVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILD 238
           RLY      + DP L+P +   +  KCP    D      V  D GTP   DN+YY+N+L 
Sbjct: 180 RLYNFSGTGDPDPTLDPAYAAQLRKKCPAGGDDD---TLVPLDPGTPNTFDNSYYKNLLA 236

Query: 239 NKGLMMVDHQLATDKRTRPYVKKMAKSQDYFFKEFSRAITLLSENNPLTGTKGEIRKVCN 298
            +GL+  D  L +D RTR  V + A +QD FF++F+ A+  +     LTG++GEIRK C 
Sbjct: 237 GRGLLTSDQALLSDPRTRAIVNRYAANQDAFFRDFAAAMVKMGNIGVLTGSQGEIRKNCR 296

Secretory peroxidases belong to class III of the plant heme-dependent peroxidase superfamily. All members of the superfamily share a heme prosthetic group and catalyze a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. Class III peroxidases are found in the extracellular space or in the vacuole in plants where they have been implicated in hydrogen peroxide detoxification, auxin catabolism and lignin biosynthesis, and stress response. Class III peroxidases contain four conserved disulphide bridges and two conserved calcium binding sites. Length = 298
>gnl|CDD|215545 PLN03030, PLN03030, cationic peroxidase; Provisional Back     alignment and domain information
>gnl|CDD|215745 pfam00141, peroxidase, Peroxidase Back     alignment and domain information
>gnl|CDD|173825 cd00691, ascorbate_peroxidase, Ascorbate peroxidases and cytochrome C peroxidases Back     alignment and domain information
>gnl|CDD|173823 cd00314, plant_peroxidase_like, Heme-dependent peroxidases similar to plant peroxidases Back     alignment and domain information
>gnl|CDD|178218 PLN02608, PLN02608, L-ascorbate peroxidase Back     alignment and domain information
>gnl|CDD|173826 cd00692, ligninase, Ligninase and other manganese-dependent fungal peroxidases Back     alignment and domain information
>gnl|CDD|178467 PLN02879, PLN02879, L-ascorbate peroxidase Back     alignment and domain information
>gnl|CDD|166005 PLN02364, PLN02364, L-ascorbate peroxidase 1 Back     alignment and domain information
>gnl|CDD|215745 pfam00141, peroxidase, Peroxidase Back     alignment and domain information
>gnl|CDD|173829 cd08201, plant_peroxidase_like_1, Uncharacterized family of plant peroxidase-like proteins Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 307
PLN03030324 cationic peroxidase; Provisional 100.0
cd00693298 secretory_peroxidase Horseradish peroxidase and re 100.0
PLN02608289 L-ascorbate peroxidase 100.0
PF00141230 peroxidase: Peroxidase; InterPro: IPR002016 Peroxi 100.0
cd00691253 ascorbate_peroxidase Ascorbate peroxidases and cyt 100.0
PLN02364250 L-ascorbate peroxidase 1 100.0
cd00692328 ligninase Ligninase and other manganese-dependent 100.0
PLN02879251 L-ascorbate peroxidase 100.0
cd00314255 plant_peroxidase_like Heme-dependent peroxidases s 100.0
cd00649409 catalase_peroxidase_1 N-terminal catalytic domain 100.0
TIGR00198 716 cat_per_HPI catalase/peroxidase HPI. Note that the 100.0
cd08201264 plant_peroxidase_like_1 Uncharacterized family of 100.0
PRK15061 726 catalase/hydroperoxidase HPI(I); Provisional 100.0
cd08200297 catalase_peroxidase_2 C-terminal non-catalytic dom 99.96
TIGR00198716 cat_per_HPI catalase/peroxidase HPI. Note that the 99.92
PRK15061726 catalase/hydroperoxidase HPI(I); Provisional 99.91
COG0376 730 KatG Catalase (peroxidase I) [Inorganic ion transp 99.87
COG0376730 KatG Catalase (peroxidase I) [Inorganic ion transp 97.46
>PLN03030 cationic peroxidase; Provisional Back     alignment and domain information 
Probab=100.00  E-value=2.1e-96  Score=697.81  Aligned_cols=266  Identities=36%  Similarity=0.629  Sum_probs=249.9

Q ss_pred             CCCCCCcccccccCchHHHHHHHHHHHHHHhCcCcccchhhhhhcccCCCCCCCccccccccCccccccccCCCCCcccc
Q 021841           29 EDPGLVMNFYKDTCPQAEDIIREQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEMDRSFGMRNFR  108 (307)
Q Consensus        29 ~~~~L~~~fY~~sCP~~e~iVr~~v~~~~~~d~~~aa~lLRL~FHDCfv~GCDaSiLL~~~~~~~~Ek~a~~N~~lrgf~  108 (307)
                      ..++|+++||++|||++|+||+++|++++++||+++|++||||||||||+||||||||+++   ..||++++|.+||||+
T Consensus        21 ~~~~L~~~fY~~sCP~aE~iV~~~v~~~~~~d~~~aa~llRL~FHDCfv~GCDaSvLl~~~---~~Ek~a~~N~~l~Gf~   97 (324)
T PLN03030         21 QGQGTRVGFYSTTCPQAESIVRKTVQSHFQSNPAIAPGLLRMHFHDCFVRGCDASILIDGS---NTEKTALPNLLLRGYD   97 (324)
T ss_pred             hhccCccchhhCcCCCHHHHHHHHHHHHHhhCcccchhhhhhhhhhheecCCceEEeeCCC---cccccCCCCcCcchHH
Confidence            3457999999999999999999999999999999999999999999999999999999965   3699999999999998


Q ss_pred             ----------------------------ceeEecCCCccccCCCCCCCCCCchhhhccCCCCCCccHHHHHHHHHhcCCC
Q 021841          109 ----------------------------DGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGID  160 (307)
Q Consensus       109 ----------------------------daV~~~GGP~~~v~~GRrD~~~s~~~~a~~~LP~p~~~~~~l~~~F~~~Gl~  160 (307)
                                                  |||+++|||.|+|++||||+++|.++++. +||+|+.++++|++.|++|||+
T Consensus        98 ~i~~iK~~~e~~CPg~VSCADilalAarDaV~~~gGP~~~v~~GRrDg~~s~~~~~~-~LP~p~~~~~~l~~~F~~~Gl~  176 (324)
T PLN03030         98 VIDDAKTQLEAACPGVVSCADILALAARDSVVLTNGLTWPVPTGRRDGRVSLASDAS-NLPGFTDSIDVQKQKFAAKGLN  176 (324)
T ss_pred             HHHHHHHHHHhhCCCcccHHHHHHHHhhccccccCCCceeeeccccCCCCCCccccc-CCcCCCCCHHHHHHHHHHcCCC
Confidence                                        89999999999999999999999887775 8999999999999999999999


Q ss_pred             cccceeeccccccccccccccccccCC------CCCCCCCcchHhHhhhcCCCCCCCCCcccccccCCCCCcccchHHHH
Q 021841          161 APGLVALLGSHSVGRTHCVKLVHRLYP------EVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYR  234 (307)
Q Consensus       161 ~~dlVaLsGaHTiG~ahc~~f~~Rly~------~~dp~~d~~~~~~L~~~Cp~~~~~~~~~~~~~lD~~tp~~FDN~Yy~  234 (307)
                      .+|||+||||||||++||.+|.+||||      .+||+|||.|+.+|++.||...+..+.   +++|+.||.+|||+||+
T Consensus       177 ~~DlVaLsGAHTiG~ahC~~f~~Rlynf~~~~~~~Dp~~d~~~~~~L~~~Cp~~~~~~~~---~~lD~~Tp~~FDn~Yy~  253 (324)
T PLN03030        177 TQDLVTLVGGHTIGTTACQFFRYRLYNFTTTGNGADPSIDASFVPQLQALCPQNGDGSRR---IALDTGSSNRFDASFFS  253 (324)
T ss_pred             HHHheeeeeccccceeeeeccccccccccCCCCCCCCchhHHHHHHHhccCCCCCCCCcc---ccCCCCCCcccccHHHH
Confidence            999999999999999999999999996      369999999999999999953222223   58999999999999999


Q ss_pred             HHhcccCCcccccccccCcCcHHHHHHHhhcH----HHHHHHHHHHHHHhhhCCCCCCCCCcccccccccc
Q 021841          235 NILDNKGLMMVDHQLATDKRTRPYVKKMAKSQ----DYFFKEFSRAITLLSENNPLTGTKGEIRKVCNLAN  301 (307)
Q Consensus       235 ~l~~~~glL~SD~~L~~d~~t~~~V~~~A~~~----~~F~~~Fa~Am~Km~~i~v~tG~~GeiR~~C~~~N  301 (307)
                      ||+.++|+|+|||+|++|++|+++|++||.|+    +.|+++|++||+|||+|+||||++|||||+|+++|
T Consensus       254 nll~~rGlL~SDq~L~~d~~T~~~V~~~A~~~~~~~~~F~~~Fa~AmvKMg~i~VlTG~~GEIRk~C~~vN  324 (324)
T PLN03030        254 NLKNGRGILESDQKLWTDASTRTFVQRFLGVRGLAGLNFNVEFGRSMVKMSNIGVKTGTNGEIRKVCSAIN  324 (324)
T ss_pred             HHHhcCCCcCCchHhhcCccHHHHHHHHhcccccchhhhHHHHHHHHHHHccCCCCCCCCCceeccccccC
Confidence            99999999999999999999999999999874    59999999999999999999999999999999998

>cd00693 secretory_peroxidase Horseradish peroxidase and related secretory plant peroxidases Back     alignment and domain information
>PLN02608 L-ascorbate peroxidase Back     alignment and domain information
>PF00141 peroxidase: Peroxidase; InterPro: IPR002016 Peroxidases are haem-containing enzymes that use hydrogen peroxide as the electron acceptor to catalyse a number of oxidative reactions Back     alignment and domain information
>cd00691 ascorbate_peroxidase Ascorbate peroxidases and cytochrome C peroxidases Back     alignment and domain information
>PLN02364 L-ascorbate peroxidase 1 Back     alignment and domain information
>cd00692 ligninase Ligninase and other manganese-dependent fungal peroxidases Back     alignment and domain information
>PLN02879 L-ascorbate peroxidase Back     alignment and domain information
>cd00314 plant_peroxidase_like Heme-dependent peroxidases similar to plant peroxidases Back     alignment and domain information
>cd00649 catalase_peroxidase_1 N-terminal catalytic domain of catalase-peroxidases Back     alignment and domain information
>TIGR00198 cat_per_HPI catalase/peroxidase HPI Back     alignment and domain information
>cd08201 plant_peroxidase_like_1 Uncharacterized family of plant peroxidase-like proteins Back     alignment and domain information
>PRK15061 catalase/hydroperoxidase HPI(I); Provisional Back     alignment and domain information
>cd08200 catalase_peroxidase_2 C-terminal non-catalytic domain of catalase-peroxidases Back     alignment and domain information
>TIGR00198 cat_per_HPI catalase/peroxidase HPI Back     alignment and domain information
>PRK15061 catalase/hydroperoxidase HPI(I); Provisional Back     alignment and domain information
>COG0376 KatG Catalase (peroxidase I) [Inorganic ion transport and metabolism] Back     alignment and domain information
>COG0376 KatG Catalase (peroxidase I) [Inorganic ion transport and metabolism] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query307
1bgp_A309 Crystal Structure Of Barley Grain Peroxidase 1 Leng 2e-39
1pa2_A306 Arabidopsis Thaliana Peroxidase A2 Length = 306 2e-35
4a5g_A308 Raphanus Sativus Anionic Peroxidase. Length = 308 9e-33
1sch_A294 Peanut Peroxidase Length = 294 4e-31
1w4w_A323 Ferric Horseradish Peroxidase C1a In Complex With F 1e-30
1gx2_A309 Recombinant Horseradish Peroxidase Phe209ser Comple 2e-30
1gw2_A308 Recombinant Horseradish Peroxidase C1a Thr171ser In 2e-30
1gwo_A309 Recombinant Horseradish Peroxidase C1a Ala170gln Le 2e-30
2ylj_A306 Horse Radish Peroxidase, Mutant S167y Length = 306 3e-30
1gwu_A309 Recombinant Horseradish Peroxidase C1a Ala140gly Le 3e-30
2atj_A308 Recombinant Horseradish Peroxidase Complex With Ben 3e-30
3atj_A309 Heme Ligand Mutant Of Recombinant Horseradish Perox 3e-30
6atj_A308 Recombinant Horseradish Peroxidase C Complex With F 3e-30
1atj_A306 Recombinant Horseradish Peroxidase C1a Length = 306 3e-30
3hdl_A304 Crystal Structure Of Highly Glycosylated Peroxidase 1e-29
4atj_A309 Distal Heme Pocket Mutant (H42e) Of Recombinant Hor 3e-29
1kzm_A308 Distal Heme Pocket Mutant (r38s/h42e) Of Recombinan 1e-28
1qgj_A300 Arabidopsis Thaliana Peroxidase N Length = 300 4e-27
1fhf_A304 The Structure Of Soybean Peroxidase Length = 304 3e-24
3riw_A271 The Crystal Structure Of Leishmania Major Peroxidas 5e-09
3riv_A271 The Crystal Structure Of Leishmania Major Peroxidas 2e-08
4ged_A268 Crystal Structure Of The Leishmania Major Peroxidas 2e-08
1jci_A294 Stabilization Of The Engineered Cation-Binding Loop 1e-07
1apx_A249 Crystal Structure Of Recombinant Ascorbate Peroxida 2e-07
2cl4_X261 Ascorbate Peroxidase R172a Mutant Length = 261 3e-07
1krj_A294 Engineering Calcium-Binding Site Into Cytochrome C 4e-07
2y6a_A249 Ascorbate Peroxidase R38a Mutant Length = 249 6e-07
2y6b_A249 Ascorbate Peroxidase R38k Mutant Length = 249 6e-07
2vcf_X264 Structure Of Isoniazid (Inh) Bound To Cytosolic Soy 7e-07
2xif_A249 The Structure Of Ascorbate Peroxidase Compound Ii L 7e-07
2vcs_A261 Structure Of Isoniazid (Inh) Bound To Cytosolic Soy 7e-07
1oaf_A261 Ascobate Peroxidase From Soybean Cytosol In Complex 7e-07
3zcg_A261 Ascorbate Peroxidase W41a-h42c Mutant Length = 261 8e-07
2ggn_X261 Conformational Mobility In The Active Site Of A Hem 8e-07
3zcy_A249 Ascorbate Peroxidase W41a-h42y Mutant Length = 249 8e-07
3zch_A261 Ascorbate Peroxidase W41a-h42m Mutant Length = 261 9e-07
1jdr_A294 Crystal Structure Of A Proximal Domain Potassium Bi 1e-06
1ccl_A291 Probing The Strength And Character Of An Asp-His-X 4e-06
1cck_A291 Altering Substrate Specificity Of Cytochrome C Pero 6e-06
3ccx_A294 Altering Substrate Specificity At The Heme Edge Of 6e-06
1cpg_A296 A Cation Binding Motif Stabilizes The Compound I Ra 9e-06
2aqd_A294 Cytochrome C Peroxidase (Ccp) In Complex With 2,5- 1e-05
1cci_A294 How Flexible Are Proteins? Trapping Of A Flexible L 1e-05
1cpd_A296 A Cation Binding Motif Stabilizes The Compound I Ra 1e-05
2v2e_A294 Structure Of Isoniazid (Inh) Bound To Cytochrome C 1e-05
3exb_A295 Crystal Structure Of Cytochrome C Peroxidase With A 1e-05
1sog_A294 Cyrstal Structure Of Cytochrome C Peroxidase Mutant 1e-05
2v23_A296 Structure Of Cytochrome C Peroxidase Mutant N184r Y 1e-05
1kxn_A289 Crystal Structure Of Cytochrome C Peroxidase With A 1e-05
1kxm_A290 Crystal Structure Of Cytochrome C Peroxidase With A 1e-05
3m23_A291 Crystallographic And Single Crystal Spectral Analys 1e-05
1s6v_A294 Structure Of A Cytochrome C Peroxidase-Cytochrome C 1e-05
1bva_A294 Manganese Binding Mutant In Cytochrome C Peroxidase 1e-05
2gb8_A294 Solution Structure Of The Complex Between Yeast Iso 2e-05
1cca_A297 The Asp-His-Fe Triad Of Cytochrome C Peroxidase Con 2e-05
2pcb_A296 Crystal Structure Of A Complex Between Electron Tra 2e-05
6ccp_A296 Effect Of Arginine-48 Replacement On The Reaction B 2e-05
4ccx_A294 Altering Substrate Specificity At The Heme Edge Of 2e-05
7ccp_A296 Effect Of Arginine-48 Replacement On The Reaction B 2e-05
4a71_A296 Cytochrome C Peroxidase In Complex With Phenol Leng 2e-05
5ccp_A296 Histidine 52 Is A Critical Residue For Rapid Format 2e-05
1dj1_A291 Crystal Structure Of R48a Mutant Of Cytochrome C Pe 2e-05
4a7m_A296 Cytochrome C Peroxidase S81w Mutant Length = 296 2e-05
4ccp_A296 X-Ray Structures Of Recombinant Yeast Cytochrome C 2e-05
3r98_A293 Joint Neutron And X-Ray Structure Of Cytochrome C P 2e-05
1kok_A294 Crystal Structure Of Mesopone Cytochrome C Peroxida 2e-05
2xj5_A294 The Structure Of Cytochrome C Peroxidase Compound I 2e-05
2xil_A294 The Structure Of Cytochrome C Peroxidase Compound I 2e-05
1dcc_A296 2.2 Angstrom Structure Of Oxyperoxidase: A Model Fo 2e-05
1mk8_A294 Crystal Structure Of A Mutant Cytochrome C Peroxida 2e-05
1cyf_A296 Identifying The Physiological Electron Transfer Sit 2e-05
3e2n_A287 Engineering Ascorbate Peroxidase Activity Into Cyto 2e-05
2x07_A293 Cytochrome C Peroxidase: Engineered Ascorbate Bindi 2e-05
4a78_A296 Cytochrome C Peroxidase M119w In Complex With Guiac 2e-05
1bem_A291 Interaction Between Proximal And Distals Regions Of 3e-05
2anz_A294 Cytochrome C Peroxidase In Complex With 2,6-Diamino 3e-05
1cmu_A294 The Role Of Aspartate-235 In The Binding Of Cations 4e-05
2rbu_X292 Cytochrome C Peroxidase In Complex With Cyclopentan 4e-05
2cep_A296 Role Of Met-230 In Intramolecular Electron Transfer 4e-05
1beq_A291 Interaction Between Proximal And Distals Regions Of 4e-05
1bej_A291 Interaction Between Proximal And Distals Regions Of 4e-05
1stq_A294 Cyrstal Structure Of Cytochrome C Peroxidase Mutant 4e-05
1ccb_A297 The Asp-His-Fe Triad Of Cytochrome C Peroxidase Con 5e-05
1a2f_A291 Probing The Strength And Character Of An Asp-His-X 5e-05
2ccp_A296 X-Ray Structures Of Recombinant Yeast Cytochrome C 5e-05
1bek_A291 Effect Of Unnatural Heme Substitution On Kinetics O 6e-05
1ebe_A294 Laue Diffraction Study On The Structure Of Cytochro 6e-05
1bep_A291 Effect Of Unnatural Heme Substitution On Kinetics O 6e-05
1iyn_A295 Crystal Structure Of Chloroplastic Ascorbate Peroxi 6e-05
1a2g_A291 Probing The Strength And Character Of An Asp-His-X 8e-05
2ia8_A291 Kinetic And Crystallographic Studies Of A Redesigne 1e-04
3e2o_A294 Crystal Structure Of Cytochrome C Peroxidase, N184r 1e-04
1ccc_A297 The Asp-His-Fe Triad Of Cytochrome C Peroxidase Con 1e-04
1dse_A292 Cytochrome C Peroxidase H175g Mutant, Imidazole Com 2e-04
1ds4_A292 Cytochrome C Peroxidase H175g Mutant, Imidazole Com 2e-04
1cce_A291 Construction Of A Bis-Aquo Heme Enzyme And Replacem 2e-04
>pdb|1BGP|A Chain A, Crystal Structure Of Barley Grain Peroxidase 1 Length = 309 Back     alignment and structure 
Iteration: 1

 Score =  159 bits (401), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 100/304 (32%), Positives = 150/304 (49%), Gaps = 38/304 (12%)
Query: 31  PGLVMNFYKDTCPQAEDIIREQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTR 90
           PGL  +FY  TCP+AE I+RE V+   ++    A   LR  FHDC VQ CDAS+LLD + 
Sbjct: 7   PGLSFDFYWQTCPRAESIVREFVQEAVRKDIGLAAGLLRLHFHDCFVQGCDASVLLDGSA 66
Query: 91  KTLSEKEMDRSFGMR-------------------------------NFRDGVVALGGPYI 119
               E++   +  +R                                 RD VV  GGP  
Sbjct: 67  TGPGEQQAPPNLTLRPSAFKAVNDIRDRLERECRGAVVSCSDILALAARDSVVVSGGPDY 126
Query: 120 PLKTGRRDGRK--SRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTH 177
            +  GRRD R   S  ++L   LP  + ++  +L     +G+DA  LV + G H++G  H
Sbjct: 127 RVPLGRRDSRSFASTQDVLSD-LPGPSSNVQSLLALLGRLGLDATDLVTISGGHTIGLAH 185
Query: 178 CVKLVHRLYPEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNIL 237
           C     RL+P  DP ++P  +  +   CP    D + V  VR    TP V DN YY +++
Sbjct: 186 CSSFEDRLFPRPDPTISPTFLSRLKRTCPAKGTDRRTVLDVR----TPNVFDNKYYIDLV 241
Query: 238 DNKGLMMVDHQLATDKRTRPYVKKMAKSQDYFFKEFSRAITLLSENNPLTGTKGEIRKVC 297
           + +GL + D  L T+  TRP V++ A+SQ  FF++F  +I  + +    T  +GE+R+ C
Sbjct: 242 NREGLFVSDQDLFTNAITRPIVERFAQSQQDFFEQFGVSIGKMGQMRVRTSDQGEVRRNC 301
Query: 298 NLAN 301
           ++ N
Sbjct: 302 SVRN 305
>pdb|1PA2|A Chain A, Arabidopsis Thaliana Peroxidase A2 Length = 306 Back     alignment and structure
>pdb|4A5G|A Chain A, Raphanus Sativus Anionic Peroxidase. Length = 308 Back     alignment and structure
>pdb|1SCH|A Chain A, Peanut Peroxidase Length = 294 Back     alignment and structure
>pdb|1W4W|A Chain A, Ferric Horseradish Peroxidase C1a In Complex With Formate Length = 323 Back     alignment and structure
>pdb|1GX2|A Chain A, Recombinant Horseradish Peroxidase Phe209ser Complex With Benzhydroxamic Acid Length = 309 Back     alignment and structure
>pdb|1GW2|A Chain A, Recombinant Horseradish Peroxidase C1a Thr171ser In Complex With Ferulic Acid Length = 308 Back     alignment and structure
>pdb|1GWO|A Chain A, Recombinant Horseradish Peroxidase C1a Ala170gln Length = 309 Back     alignment and structure
>pdb|2YLJ|A Chain A, Horse Radish Peroxidase, Mutant S167y Length = 306 Back     alignment and structure
>pdb|1GWU|A Chain A, Recombinant Horseradish Peroxidase C1a Ala140gly Length = 309 Back     alignment and structure
>pdb|2ATJ|A Chain A, Recombinant Horseradish Peroxidase Complex With Benzhydroxamic Acid Length = 308 Back     alignment and structure
>pdb|3ATJ|A Chain A, Heme Ligand Mutant Of Recombinant Horseradish Peroxidase In Complex With Benzhydroxamic Acid Length = 309 Back     alignment and structure
>pdb|6ATJ|A Chain A, Recombinant Horseradish Peroxidase C Complex With Ferulic Acid Length = 308 Back     alignment and structure
>pdb|1ATJ|A Chain A, Recombinant Horseradish Peroxidase C1a Length = 306 Back     alignment and structure
>pdb|3HDL|A Chain A, Crystal Structure Of Highly Glycosylated Peroxidase From Royal Palm Tree Length = 304 Back     alignment and structure
>pdb|4ATJ|A Chain A, Distal Heme Pocket Mutant (H42e) Of Recombinant Horseradish Peroxidase In Complex With Benzhydroxamic Acid Length = 309 Back     alignment and structure
>pdb|1KZM|A Chain A, Distal Heme Pocket Mutant (r38s/h42e) Of Recombinant Horseradish Peroxidase C (hrp C) Length = 308 Back     alignment and structure
>pdb|1QGJ|A Chain A, Arabidopsis Thaliana Peroxidase N Length = 300 Back     alignment and structure
>pdb|1FHF|A Chain A, The Structure Of Soybean Peroxidase Length = 304 Back     alignment and structure
>pdb|3RIW|A Chain A, The Crystal Structure Of Leishmania Major Peroxidase Mutant C197t Length = 271 Back     alignment and structure
>pdb|3RIV|A Chain A, The Crystal Structure Of Leishmania Major Peroxidase Length = 271 Back     alignment and structure
>pdb|4GED|A Chain A, Crystal Structure Of The Leishmania Major Peroxidase-Cytochrome C Complex Length = 268 Back     alignment and structure
>pdb|1JCI|A Chain A, Stabilization Of The Engineered Cation-Binding Loop In Cytochrome C Peroxidase (Ccp) Length = 294 Back     alignment and structure
>pdb|1APX|A Chain A, Crystal Structure Of Recombinant Ascorbate Peroxidase Length = 249 Back     alignment and structure
>pdb|2CL4|X Chain X, Ascorbate Peroxidase R172a Mutant Length = 261 Back     alignment and structure
>pdb|1KRJ|A Chain A, Engineering Calcium-Binding Site Into Cytochrome C Peroxidase (Ccp) Length = 294 Back     alignment and structure
>pdb|2Y6A|A Chain A, Ascorbate Peroxidase R38a Mutant Length = 249 Back     alignment and structure
>pdb|2Y6B|A Chain A, Ascorbate Peroxidase R38k Mutant Length = 249 Back     alignment and structure
>pdb|2VCF|X Chain X, Structure Of Isoniazid (Inh) Bound To Cytosolic Soybean Ascorbate Peroxidase Length = 264 Back     alignment and structure
>pdb|2XIF|A Chain A, The Structure Of Ascorbate Peroxidase Compound Ii Length = 249 Back     alignment and structure
>pdb|2VCS|A Chain A, Structure Of Isoniazid (Inh) Bound To Cytosolic Soybean Ascorbate Peroxidase Mutant H42a Length = 261 Back     alignment and structure
>pdb|1OAF|A Chain A, Ascobate Peroxidase From Soybean Cytosol In Complex With Ascorbate Length = 261 Back     alignment and structure
>pdb|3ZCG|A Chain A, Ascorbate Peroxidase W41a-h42c Mutant Length = 261 Back     alignment and structure
>pdb|2GGN|X Chain X, Conformational Mobility In The Active Site Of A Heme Peroxidase Length = 261 Back     alignment and structure
>pdb|3ZCY|A Chain A, Ascorbate Peroxidase W41a-h42y Mutant Length = 249 Back     alignment and structure
>pdb|3ZCH|A Chain A, Ascorbate Peroxidase W41a-h42m Mutant Length = 261 Back     alignment and structure
>pdb|1JDR|A Chain A, Crystal Structure Of A Proximal Domain Potassium Binding Variant Of Cytochrome C Peroxidase Length = 294 Back     alignment and structure
>pdb|1CCL|A Chain A, Probing The Strength And Character Of An Asp-His-X Hydrogen Bond By Introducing Buried Charges Length = 291 Back     alignment and structure
>pdb|1CCK|A Chain A, Altering Substrate Specificity Of Cytochrome C Peroxidase Towards A Small Molecular Substrate Peroxidase By Substituting Tyrosine For Phe 202 Length = 291 Back     alignment and structure
>pdb|3CCX|A Chain A, Altering Substrate Specificity At The Heme Edge Of Cytochrome C Peroxidase Length = 294 Back     alignment and structure
>pdb|1CPG|A Chain A, A Cation Binding Motif Stabilizes The Compound I Radical Of Cytochrome C Peroxidase Length = 296 Back     alignment and structure
>pdb|2AQD|A Chain A, Cytochrome C Peroxidase (Ccp) In Complex With 2,5- Diaminopyridine Length = 294 Back     alignment and structure
>pdb|1CCI|A Chain A, How Flexible Are Proteins? Trapping Of A Flexible Loop Length = 294 Back     alignment and structure
>pdb|1CPD|A Chain A, A Cation Binding Motif Stabilizes The Compound I Radical Of Cytochrome C Peroxidase Length = 296 Back     alignment and structure
>pdb|2V2E|A Chain A, Structure Of Isoniazid (Inh) Bound To Cytochrome C Peroxidase Mutant N184r Y36a Length = 294 Back     alignment and structure
>pdb|3EXB|A Chain A, Crystal Structure Of Cytochrome C Peroxidase With A Proposed Electron Pathway Excised In A Complex With A Peptide Wire Length = 295 Back     alignment and structure
>pdb|1SOG|A Chain A, Cyrstal Structure Of Cytochrome C Peroxidase Mutant: Ccpk2m2 Length = 294 Back     alignment and structure
>pdb|2V23|A Chain A, Structure Of Cytochrome C Peroxidase Mutant N184r Y36a Length = 296 Back     alignment and structure
>pdb|1KXN|A Chain A, Crystal Structure Of Cytochrome C Peroxidase With A Proposed Electron Transfer Pathway Excised To Form A Ligand Binding Channel Length = 289 Back     alignment and structure
>pdb|1KXM|A Chain A, Crystal Structure Of Cytochrome C Peroxidase With A Proposed Electron Transfer Pathway Excised To Form A Ligand Binding Channel Length = 290 Back     alignment and structure
>pdb|3M23|A Chain A, Crystallographic And Single Crystal Spectral Analysis Of The Peroxidase Ferryl Intermediate Length = 291 Back     alignment and structure
>pdb|1S6V|A Chain A, Structure Of A Cytochrome C Peroxidase-Cytochrome C Site Specific Cross-Link Length = 294 Back     alignment and structure
>pdb|1BVA|A Chain A, Manganese Binding Mutant In Cytochrome C Peroxidase Length = 294 Back     alignment and structure
>pdb|2GB8|A Chain A, Solution Structure Of The Complex Between Yeast Iso-1- Cytochrome C And Yeast Cytochrome C Peroxidase Length = 294 Back     alignment and structure
>pdb|1CCA|A Chain A, The Asp-His-Fe Triad Of Cytochrome C Peroxidase Controls The Reduction Potential, Electronic Structure, And Coupling Of The Tryptophan Free-Radical To The Heme Length = 297 Back     alignment and structure
>pdb|2PCB|A Chain A, Crystal Structure Of A Complex Between Electron Transfer Partners, Cytochrome C Peroxidase And Cytochrome C Length = 296 Back     alignment and structure
>pdb|6CCP|A Chain A, Effect Of Arginine-48 Replacement On The Reaction Between Cytochrome C Peroxidase And Hydrogen Peroxide Length = 296 Back     alignment and structure
>pdb|4CCX|A Chain A, Altering Substrate Specificity At The Heme Edge Of Cytochrome C Peroxidase Length = 294 Back     alignment and structure
>pdb|7CCP|A Chain A, Effect Of Arginine-48 Replacement On The Reaction Between Cytochrome C Peroxidase And Hydrogen Peroxide Length = 296 Back     alignment and structure
>pdb|4A71|A Chain A, Cytochrome C Peroxidase In Complex With Phenol Length = 296 Back     alignment and structure
>pdb|5CCP|A Chain A, Histidine 52 Is A Critical Residue For Rapid Formation Of Cytochrome C Peroxidase Compound I Length = 296 Back     alignment and structure
>pdb|1DJ1|A Chain A, Crystal Structure Of R48a Mutant Of Cytochrome C Peroxidase Length = 291 Back     alignment and structure
>pdb|4A7M|A Chain A, Cytochrome C Peroxidase S81w Mutant Length = 296 Back     alignment and structure
>pdb|4CCP|A Chain A, X-Ray Structures Of Recombinant Yeast Cytochrome C Peroxidase And Three Heme-Cleft Mutants Prepared By Site-Directed Mutagenesis Length = 296 Back     alignment and structure
>pdb|3R98|A Chain A, Joint Neutron And X-Ray Structure Of Cytochrome C Peroxidase Length = 293 Back     alignment and structure
>pdb|1KOK|A Chain A, Crystal Structure Of Mesopone Cytochrome C Peroxidase (Mpccp) Length = 294 Back     alignment and structure
>pdb|2XJ5|A Chain A, The Structure Of Cytochrome C Peroxidase Compound Ii Length = 294 Back     alignment and structure
>pdb|2XIL|A Chain A, The Structure Of Cytochrome C Peroxidase Compound I Length = 294 Back     alignment and structure
>pdb|1DCC|A Chain A, 2.2 Angstrom Structure Of Oxyperoxidase: A Model For The Enzyme:peroxide Complex Length = 296 Back     alignment and structure
>pdb|1MK8|A Chain A, Crystal Structure Of A Mutant Cytochrome C Peroxidase Showing A Novel Trp-Tyr Covalent Cross-Link Length = 294 Back     alignment and structure
>pdb|1CYF|A Chain A, Identifying The Physiological Electron Transfer Site Of Cytochrome C Peroxidase By Structure-Based Engineering Length = 296 Back     alignment and structure
>pdb|3E2N|A Chain A, Engineering Ascorbate Peroxidase Activity Into Cytochrome C Peroxidase Length = 287 Back     alignment and structure
>pdb|2X07|A Chain A, Cytochrome C Peroxidase: Engineered Ascorbate Binding Site Length = 293 Back     alignment and structure
>pdb|4A78|A Chain A, Cytochrome C Peroxidase M119w In Complex With Guiacol Length = 296 Back     alignment and structure
>pdb|1BEM|A Chain A, Interaction Between Proximal And Distals Regions Of Cytochrome C Peroxidase Length = 291 Back     alignment and structure
>pdb|2ANZ|A Chain A, Cytochrome C Peroxidase In Complex With 2,6-Diaminopyridine Length = 294 Back     alignment and structure
>pdb|1CMU|A Chain A, The Role Of Aspartate-235 In The Binding Of Cations To An Artificial Cavity At The Radical Site Of Cytochrome C Peroxidase Length = 294 Back     alignment and structure
>pdb|2RBU|X Chain X, Cytochrome C Peroxidase In Complex With Cyclopentane-Carboximidamide Length = 292 Back     alignment and structure
>pdb|2CEP|A Chain A, Role Of Met-230 In Intramolecular Electron Transfer Between The Oxyferryl Heme And Trp 191 In Cytochrome C Peroxidase Compound Ii Length = 296 Back     alignment and structure
>pdb|1BEQ|A Chain A, Interaction Between Proximal And Distals Regions Of Cytochrome C Peroxidase Length = 291 Back     alignment and structure
>pdb|1BEJ|A Chain A, Interaction Between Proximal And Distals Regions Of Cytochrome C Peroxidase Length = 291 Back     alignment and structure
>pdb|1STQ|A Chain A, Cyrstal Structure Of Cytochrome C Peroxidase Mutant: Ccpk2m3 Length = 294 Back     alignment and structure
>pdb|1CCB|A Chain A, The Asp-His-Fe Triad Of Cytochrome C Peroxidase Controls The Reduction Potential, Electronic Structure, And Coupling Of The Tryptophan Free-Radical To The Heme Length = 297 Back     alignment and structure
>pdb|1A2F|A Chain A, Probing The Strength And Character Of An Asp-His-X Hydrogen Bond By Introducing Buried Charges Length = 291 Back     alignment and structure
>pdb|2CCP|A Chain A, X-Ray Structures Of Recombinant Yeast Cytochrome C Peroxidase And Three Heme-Cleft Mutants Prepared By Site-Directed Mutagenesis Length = 296 Back     alignment and structure
>pdb|1BEK|A Chain A, Effect Of Unnatural Heme Substitution On Kinetics Of Electron Transfer In Cytochrome C Peroxidase Length = 291 Back     alignment and structure
>pdb|1EBE|A Chain A, Laue Diffraction Study On The Structure Of Cytochrome C Peroxidase Compound I Length = 294 Back     alignment and structure
>pdb|1BEP|A Chain A, Effect Of Unnatural Heme Substitution On Kinetics Of Electron Transfer In Cytochrome C Peroxidase Length = 291 Back     alignment and structure
>pdb|1IYN|A Chain A, Crystal Structure Of Chloroplastic Ascorbate Peroxidase From Tobacco Plants And Structural Insights For Its Instability Length = 295 Back     alignment and structure
>pdb|1A2G|A Chain A, Probing The Strength And Character Of An Asp-His-X Hydrogen Bond By Introducing Buried Charges Length = 291 Back     alignment and structure
>pdb|2IA8|A Chain A, Kinetic And Crystallographic Studies Of A Redesigned Manganese-Binding Site In Cytochrome C Peroxidase Length = 291 Back     alignment and structure
>pdb|3E2O|A Chain A, Crystal Structure Of Cytochrome C Peroxidase, N184r Mutant Length = 294 Back     alignment and structure
>pdb|1CCC|A Chain A, The Asp-His-Fe Triad Of Cytochrome C Peroxidase Controls The Reduction Potential, Electronic Structure, And Coupling Of The Tryptophan Free-Radical To The Heme Length = 297 Back     alignment and structure
>pdb|1DSE|A Chain A, Cytochrome C Peroxidase H175g Mutant, Imidazole Complex, With Phosphate Bound, Ph 6, 100k Length = 292 Back     alignment and structure
>pdb|1DS4|A Chain A, Cytochrome C Peroxidase H175g Mutant, Imidazole Complex, Ph 6, 100k Length = 292 Back     alignment and structure
>pdb|1CCE|A Chain A, Construction Of A Bis-Aquo Heme Enzyme And Replacement With Exogenous Ligand Length = 291 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query307
1bgp_A309 Barley grain peroxidase; chromoprotein, oxidoreduc 9e-87
3hdl_A304 Royal PALM TREE peroxidase; glycosylated, oxidored 1e-83
1sch_A294 PNP, peanut peroxidase, major cationic isozyme; ca 1e-83
1fhf_A304 SEED coat peroxidase; oxidoreductase; HET: HEM; 2. 3e-82
1pa2_A306 Peroxidase, ATP A2; oxidoreductase; HET: HEM; 1.45 4e-81
1gwu_A309 Peroxidase C1A; oxidoreductase, glycoprotein, heme 7e-80
1qgj_A300 Peroxidase N; oxidoreductase; HET: HEM GSH; 1.90A 4e-76
3m5q_A357 Manganese peroxidase 1; heme, Mn(II)-binding site, 1e-43
3fmu_A331 VersatIle peroxidase VPL2; class II (fungal) perox 2e-43
1iyn_A295 Chloroplastic ascorbate peroxidase; hydrogen perox 2e-43
2vcn_A261 Ascorbate peroxidase; INH, APX, isoniazid, oxidore 4e-41
3q3u_A338 Lignin peroxidase; oxidoreductase; HET: HEM; 1.85A 2e-38
2e39_A344 Peroxidase; heme protein, coordination geometry of 2e-36
1llp_A343 LIP4.15, lignin peroxidase; heme protein, glyco pr 1e-34
3riv_A271 Ascorbate peroxidase; alpha helical bundle, heme p 5e-18
3e2o_A294 CCP, cytochrome C peroxidase; cytochrome C peroxid 2e-15
>1bgp_A Barley grain peroxidase; chromoprotein, oxidoreductase; HET: HEM; 1.90A {Hordeum vulgare} SCOP: a.93.1.1 Length = 309 Back     alignment and structure
 Score =  261 bits (669), Expect = 9e-87
 Identities = 97/303 (32%), Positives = 148/303 (48%), Gaps = 36/303 (11%)

Query: 31  PGLVMNFYKDTCPQAEDIIREQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTR 90
           PGL  +FY  TCP+AE I+RE V+   ++    A   LR  FHDC VQ CDAS+LLD + 
Sbjct: 7   PGLSFDFYWQTCPRAESIVREFVQEAVRKDIGLAAGLLRLHFHDCFVQGCDASVLLDGSA 66

Query: 91  KTLSEKEM--DRSFGMRNF-----------------------------RDGVVALGGPYI 119
               E++   + +     F                             RD VV  GGP  
Sbjct: 67  TGPGEQQAPPNLTLRPSAFKAVNDIRDRLERECRGAVVSCSDILALAARDSVVVSGGPDY 126

Query: 120 PLKTGRRDGRK-SRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHC 178
            +  GRRD R  +  + +   LP  + ++  +L     +G+DA  LV + G H++G  HC
Sbjct: 127 RVPLGRRDSRSFASTQDVLSDLPGPSSNVQSLLALLGRLGLDATDLVTISGGHTIGLAHC 186

Query: 179 VKLVHRLYPEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILD 238
                RL+P  DP ++P  +  +   CP    D + V     D  TP V DN YY ++++
Sbjct: 187 SSFEDRLFPRPDPTISPTFLSRLKRTCPAKGTDRRTV----LDVRTPNVFDNKYYIDLVN 242

Query: 239 NKGLMMVDHQLATDKRTRPYVKKMAKSQDYFFKEFSRAITLLSENNPLTGTKGEIRKVCN 298
            +GL + D  L T+  TRP V++ A+SQ  FF++F  +I  + +    T  +GE+R+ C+
Sbjct: 243 REGLFVSDQDLFTNAITRPIVERFAQSQQDFFEQFGVSIGKMGQMRVRTSDQGEVRRNCS 302

Query: 299 LAN 301
           + N
Sbjct: 303 VRN 305
>3hdl_A Royal PALM TREE peroxidase; glycosylated, oxidoreductase; HET: HEM MES NAG FUC MAN; 1.85A {Roystonea regia} Length = 304 Back     alignment and structure
>1sch_A PNP, peanut peroxidase, major cationic isozyme; calcium binding, glycosylation, oxidoreductase; HET: NAG HEM; 2.56A {Arachis hypogaea} SCOP: a.93.1.1 Length = 294 Back     alignment and structure
>1fhf_A SEED coat peroxidase; oxidoreductase; HET: HEM; 2.80A {Glycine max} SCOP: a.93.1.1 Length = 304 Back     alignment and structure
>1pa2_A Peroxidase, ATP A2; oxidoreductase; HET: HEM; 1.45A {Arabidopsis thaliana} SCOP: a.93.1.1 PDB: 1qo4_A* Length = 306 Back     alignment and structure
>1gwu_A Peroxidase C1A; oxidoreductase, glycoprotein, heme, multigene family, signal,; HET: HEM; 1.31A {Armoracia rusticana} SCOP: a.93.1.1 PDB: 1w4w_A* 1w4y_A* 1gwo_A* 2atj_A* 1gwt_A* 3atj_A* 1gx2_A* 7atj_A* 1h55_A* 1h58_A* 1h5a_A* 1h5c_A* 1h5d_A* 1h5e_A* 1h5f_A* 1h57_A* 1h5h_A* 1h5i_A* 1h5j_A* 1h5k_A* ... Length = 309 Back     alignment and structure
>1qgj_A Peroxidase N; oxidoreductase; HET: HEM GSH; 1.90A {Arabidopsis thaliana} SCOP: a.93.1.1 Length = 300 Back     alignment and structure
>3m5q_A Manganese peroxidase 1; heme, Mn(II)-binding site, Ca(II)-binding site, glycosylation, ultrahigh resolution, calcium; HET: NAG MAN HEM; 0.93A {Phanerochaete chrysosporium} PDB: 1mnp_A* 1yyg_A* 1yzp_A* 1yzr_A* 1yyd_A* 3m8m_A* 1mn1_A* 1mn2_A* Length = 357 Back     alignment and structure
>3fmu_A VersatIle peroxidase VPL2; class II (fungal) peroxidases, protoporphyrin IX, electron T lignin peroxidase, lignin degradation; HET: HEM; 1.04A {Pleurotus eryngii} PDB: 3fjw_A* 2boq_A* 3fm1_A* 3fm4_A* 3fm6_A* 3fkg_A* 2w23_A* 2vka_A* Length = 331 Back     alignment and structure
>1iyn_A Chloroplastic ascorbate peroxidase; hydrogen peroxide, tobacco plant, stromal ascorbate peroxidase, oxidoreductase; HET: HEM; 1.60A {Nicotiana tabacum} SCOP: a.93.1.1 Length = 295 Back     alignment and structure
>2vcn_A Ascorbate peroxidase; INH, APX, isoniazid, oxidoreductase; HET: HEM ISZ; 1.20A {Glycine max} PDB: 2ggn_X* 2ghd_X* 2ghe_X* 2ghc_X* 2vnx_X* 2vnz_X* 2vo2_X* 2wd4_A* 1oaf_A* 1oag_A* 1v0h_X* 2ghh_X* 2ghk_X* 2vcf_X* 2cl4_X* 2vcs_A* 2xi6_A* 2xif_A* 2xih_A* 2xj6_A* ... Length = 261 Back     alignment and structure
>3q3u_A Lignin peroxidase; oxidoreductase; HET: HEM; 1.85A {Trametes cervina} Length = 338 Back     alignment and structure
>2e39_A Peroxidase; heme protein, coordination geometry of heme iron, ARP, perox oxidoreductase; HET: NAG MAN HEM; 1.30A {'arthromyces ramosus'} SCOP: a.93.1.1 PDB: 1arp_A* 1arv_A* 1arw_A* 1arx_A* 1ary_A* 1c8i_A* 1ck6_A* 1gza_A* 1gzb_A* 1hsr_A* 1aru_A* 2e3a_A* 2e3b_A* 1lyk_A* 1lyc_A* 1ly9_A* 1h3j_A* 1ly8_A* Length = 344 Back     alignment and structure
>1llp_A LIP4.15, lignin peroxidase; heme protein, glyco protein,, oxidoreductase; HET: NAG MAN A2G HEM; 1.70A {Phanerochaete chrysosporium} SCOP: a.93.1.1 PDB: 1lga_A* 1b80_A* 1b82_A* 1b85_A* 1qpa_A* Length = 343 Back     alignment and structure
>3riv_A Ascorbate peroxidase; alpha helical bundle, heme peroxidase, oxidoreductase; HET: HEM; 1.76A {Leishmania major} PDB: 3riw_A* Length = 271 Back     alignment and structure
>3e2o_A CCP, cytochrome C peroxidase; cytochrome C peroxidase (CCP), heme, hydrogen peroxide, iron, metal-binding, mitochondrion; HET: HEM; 1.06A {Saccharomyces cerevisiae} PDB: 1z53_A* 1kok_A* 1sbm_A* 1sdq_A* 1s73_A* 1zby_A* 1zbz_A* 2b0z_A* 2b10_A* 2b11_A* 2b12_A* 2cyp_A* 2ycg_A* 2v23_A* 1ebe_A* 3r98_A* 3r99_A* 1mkr_A* 1mk8_A* 1mkq_A* ... Length = 294 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query307
3hdl_A304 Royal PALM TREE peroxidase; glycosylated, oxidored 100.0
1fhf_A304 SEED coat peroxidase; oxidoreductase; HET: HEM; 2. 100.0
1pa2_A306 Peroxidase, ATP A2; oxidoreductase; HET: HEM; 1.45 100.0
1sch_A294 PNP, peanut peroxidase, major cationic isozyme; ca 100.0
1gwu_A309 Peroxidase C1A; oxidoreductase, glycoprotein, heme 100.0
1bgp_A309 Barley grain peroxidase; chromoprotein, oxidoreduc 100.0
1qgj_A300 Peroxidase N; oxidoreductase; HET: HEM GSH; 1.90A 100.0
1iyn_A295 Chloroplastic ascorbate peroxidase; hydrogen perox 100.0
2cca_A 740 Peroxidase/catalase T; oxidoreductase, catalase-pe 100.0
1llp_A343 LIP4.15, lignin peroxidase; heme protein, glyco pr 100.0
2e39_A344 Peroxidase; heme protein, coordination geometry of 100.0
1itk_A 731 Catalase-peroxidase; heme protein, oxidoreductase; 100.0
1ub2_A 720 Catalase-peroxidase; KATG, cyanobacteria, oxidored 100.0
2vcn_A261 Ascorbate peroxidase; INH, APX, isoniazid, oxidore 100.0
3fmu_A331 VersatIle peroxidase VPL2; class II (fungal) perox 100.0
3m5q_A357 Manganese peroxidase 1; heme, Mn(II)-binding site, 100.0
3q3u_A338 Lignin peroxidase; oxidoreductase; HET: HEM; 1.85A 100.0
3riv_A271 Ascorbate peroxidase; alpha helical bundle, heme p 100.0
3ut2_A 764 Catalase-peroxidase 2; KATG, fungal, heme enzyme, 100.0
3n3r_A 748 Catalase-peroxidase; E198A variant, tuberclosis, i 100.0
3vli_A 737 Catalase-peroxidase 2; oxidoreductase; HET: HEM; 1 100.0
3e2o_A294 CCP, cytochrome C peroxidase; cytochrome C peroxid 100.0
1u2k_A309 Peroxidase/catalase HPI; KATG, catalase-peroxidase 100.0
1ub2_A720 Catalase-peroxidase; KATG, cyanobacteria, oxidored 100.0
2cca_A740 Peroxidase/catalase T; oxidoreductase, catalase-pe 100.0
1itk_A731 Catalase-peroxidase; heme protein, oxidoreductase; 100.0
3rrw_A268 Thylakoid lumenal 29 kDa protein, chloroplastic; c 100.0
3vli_A737 Catalase-peroxidase 2; oxidoreductase; HET: HEM; 1 100.0
3ut2_A764 Catalase-peroxidase 2; KATG, fungal, heme enzyme, 100.0
3n3r_A748 Catalase-peroxidase; E198A variant, tuberclosis, i 100.0
>3hdl_A Royal PALM TREE peroxidase; glycosylated, oxidoreductase; HET: HEM MES NAG FUC MAN; 1.85A {Roystonea regia} SCOP: a.93.1.0 Back     alignment and structure
Probab=100.00  E-value=3.2e-98  Score=706.81  Aligned_cols=267  Identities=33%  Similarity=0.555  Sum_probs=255.6

Q ss_pred             CCcccccccCchHHHHHHHHHHHHHHhCcCcccchhhhhhcccCCCCCCCccccccccCccccccccCCC-CCcccc---
Q 021841           33 LVMNFYKDTCPQAEDIIREQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEMDRSF-GMRNFR---  108 (307)
Q Consensus        33 L~~~fY~~sCP~~e~iVr~~v~~~~~~d~~~aa~lLRL~FHDCfv~GCDaSiLL~~~~~~~~Ek~a~~N~-~lrgf~---  108 (307)
                      |+++||++|||++|+|||++|++++.+||+++|+|||||||||||+||||||||++++++.+||++++|. +||||+   
T Consensus         2 L~~~fY~~sCP~~e~iVr~~v~~~~~~d~~~aa~llRL~FHDCfv~GCDgSiLld~t~~~~~Ek~~~~N~~~lrgf~vid   81 (304)
T 3hdl_A            2 LQIGFYNTSCPTAESLVQQAVAAAFANNSGIAPGLIRMHFHDCFVRGCDASVLLDSTANNTAEKDAIPNNPSLRGFEVIT   81 (304)
T ss_dssp             CEETTTTTTCTTHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHHTTTSSSSGGGCCCBTTBCCGGGSTTTTTTCCCHHHHH
T ss_pred             CccChhhCcCcCHHHHHHHHHHHHHHhCCcchHHHHHHheecccCCCCCeeeeecCCCCCcccccCCCcccchHHHHHHH
Confidence            7899999999999999999999999999999999999999999999999999999998888999999998 899998   


Q ss_pred             -------------------------ceeEecCCCccccCCCCCCCCCCchhhhccCCCCCCccHHHHHHHHHhcCCCccc
Q 021841          109 -------------------------DGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPG  163 (307)
Q Consensus       109 -------------------------daV~~~GGP~~~v~~GRrD~~~s~~~~a~~~LP~p~~~~~~l~~~F~~~Gl~~~d  163 (307)
                                               |||+++|||.|+|++||||++++...+++.+||+|+.++++|++.|++||||.+|
T Consensus        82 ~iK~~le~~Cp~~VScADilalAardav~~~GGP~~~v~~GRrD~~~s~~~~~~~~lP~p~~~~~~l~~~F~~~Gl~~~d  161 (304)
T 3hdl_A           82 AAKSAVEAACPQTVSCADILAFAARDSANLAGNITYQVPSGRRDGTVSLASEANAQIPSPLFNATQLINSFANKTLTADE  161 (304)
T ss_dssp             HHHHHHHHHSTTTSCHHHHHHHHHHHHHHHHHCCCCCCEECCCBCSCCCHHHHHHHSCCTTCCHHHHHHHHHTTTCCHHH
T ss_pred             HHHHHHHhhCCCCccHHHHHHHHHhhhhhccCCCccccccCccCCCCCCccccccCCCCCCCCHHHHHHHHHHcCCCHHH
Confidence                                     7889999999999999999999999888889999999999999999999999999


Q ss_pred             ceeeccccccccccccccccccCC-----CCCCCCCcchHhHhhhcCCCCCC--CCCcccccccCCCCCcccchHHHHHH
Q 021841          164 LVALLGSHSVGRTHCVKLVHRLYP-----EVDPALNPDHVPHMLHKCPDAIP--DPKAVQYVRNDRGTPMVLDNNYYRNI  236 (307)
Q Consensus       164 lVaLsGaHTiG~ahc~~f~~Rly~-----~~dp~~d~~~~~~L~~~Cp~~~~--~~~~~~~~~lD~~tp~~FDN~Yy~~l  236 (307)
                      |||||||||||++||.+|.+||||     .+||+||+.|++.|++.||.+.+  +.++   ++||+.||.+|||+||+||
T Consensus       162 ~VaLsGaHTiG~ahC~~f~~Rly~f~~~~~~DP~ld~~~a~~L~~~Cp~~~~~~~~~~---~~lD~~TP~~FDN~Yy~nL  238 (304)
T 3hdl_A          162 MVTLSGAHSIGVAHCSSFTNRLYNFNSGSGIDPTLSPSYAALLRNTCPANSTRFTPIT---VSLDIITPSVLDNMYYTGV  238 (304)
T ss_dssp             HHHHGGGGGSSEEEGGGTGGGTSSCSSSSSSCTTSCHHHHHHHHHHSCTTCCTTSCCE---EESCSSSTTSCSTHHHHHH
T ss_pred             hhhhhccccccccccchhhhhhcccCCCCCCCCcccHHHHHHHhccCCCCCCCCCccc---cCCCCCCcccccHHHHHHH
Confidence            999999999999999999999997     47999999999999999997544  3333   5899999999999999999


Q ss_pred             hcccCCcccccccccCcCcHHHHHHHhhcHHHHHHHHHHHHHHhhhCCCCCCCCCccccccccccC
Q 021841          237 LDNKGLMMVDHQLATDKRTRPYVKKMAKSQDYFFKEFSRAITLLSENNPLTGTKGEIRKVCNLANK  302 (307)
Q Consensus       237 ~~~~glL~SD~~L~~d~~t~~~V~~~A~~~~~F~~~Fa~Am~Km~~i~v~tG~~GeiR~~C~~~N~  302 (307)
                      +.++|||+|||+|+.|++|+++|++||.||+.||++|++||+||++|+||||++||||++|+++|+
T Consensus       239 ~~~~glL~SDq~L~~d~~t~~~V~~yA~~~~~F~~~Fa~AmvKmg~igv~tg~~GeIR~~C~~~N~  304 (304)
T 3hdl_A          239 QLTLGLLTSDQALVTEANLSAAVKANAMNLTAWASKFAQAMVKMGQIEVLTGTQGEIRTNCSVVNS  304 (304)
T ss_dssp             HTTCCCSHHHHGGGSSHHHHHHHHHHHHCHHHHHHHHHHHHHHHTTTTCCCTTSSBCCSBTTBCC-
T ss_pred             HhCcCCCCCCHHHhcCccHHHHHHHhccCHHHHHHHHHHHHHHHHhcCCCCCCCCeeeCCccccCC
Confidence            999999999999999999999999999999999999999999999999999999999999999993
>1fhf_A SEED coat peroxidase; oxidoreductase; HET: HEM; 2.80A {Glycine max} SCOP: a.93.1.1 Back     alignment and structure
>1pa2_A Peroxidase, ATP A2; oxidoreductase; HET: HEM; 1.45A {Arabidopsis thaliana} SCOP: a.93.1.1 PDB: 1qo4_A* Back     alignment and structure
>1sch_A PNP, peanut peroxidase, major cationic isozyme; calcium binding, glycosylation, oxidoreductase; HET: NAG HEM; 2.56A {Arachis hypogaea} SCOP: a.93.1.1 Back     alignment and structure
>1gwu_A Peroxidase C1A; oxidoreductase, glycoprotein, heme, multigene family, signal,; HET: HEM; 1.31A {Armoracia rusticana} SCOP: a.93.1.1 PDB: 1w4w_A* 1w4y_A* 1gwo_A* 2atj_A* 1gwt_A* 3atj_A* 1gx2_A* 7atj_A* 1h55_A* 1h58_A* 1h5a_A* 1h5c_A* 1h5d_A* 1h5e_A* 1h5f_A* 1h57_A* 1h5h_A* 1h5i_A* 1h5j_A* 1h5k_A* ... Back     alignment and structure
>1bgp_A Barley grain peroxidase; chromoprotein, oxidoreductase; HET: HEM; 1.90A {Hordeum vulgare} SCOP: a.93.1.1 Back     alignment and structure
>1qgj_A Peroxidase N; oxidoreductase; HET: HEM GSH; 1.90A {Arabidopsis thaliana} SCOP: a.93.1.1 Back     alignment and structure
>1iyn_A Chloroplastic ascorbate peroxidase; hydrogen peroxide, tobacco plant, stromal ascorbate peroxidase, oxidoreductase; HET: HEM; 1.60A {Nicotiana tabacum} SCOP: a.93.1.1 Back     alignment and structure
>2cca_A Peroxidase/catalase T; oxidoreductase, catalase-peroxidase, KATG, heme, hydrogen peroxide, iron, metal-binding, organic radical; HET: HEM; 2.0A {Mycobacterium tuberculosis} SCOP: a.93.1.3 a.93.1.3 PDB: 1sj2_A* 2ccd_A* Back     alignment and structure
>1llp_A LIP4.15, lignin peroxidase; heme protein, glyco protein,, oxidoreductase; HET: NAG MAN A2G HEM; 1.70A {Phanerochaete chrysosporium} SCOP: a.93.1.1 PDB: 1lga_A* 1b80_A* 1b82_A* 1b85_A* 1qpa_A* Back     alignment and structure
>2e39_A Peroxidase; heme protein, coordination geometry of heme iron, ARP, perox oxidoreductase; HET: NAG MAN HEM; 1.30A {'arthromyces ramosus'} SCOP: a.93.1.1 PDB: 1arp_A* 1arv_A* 1arw_A* 1arx_A* 1ary_A* 1c8i_A* 1ck6_A* 1gza_A* 1gzb_A* 1hsr_A* 1aru_A* 2e3a_A* 2e3b_A* 1lyk_A* 1lyc_A* 1ly9_A* 1h3j_A* 1ly8_A* Back     alignment and structure
>1itk_A Catalase-peroxidase; heme protein, oxidoreductase; HET: HEM; 2.00A {Haloarcula marismortui} SCOP: a.93.1.3 a.93.1.3 Back     alignment and structure
>1ub2_A Catalase-peroxidase; KATG, cyanobacteria, oxidoreductase; HET: HEM; 2.40A {Synechococcus elongatus} SCOP: a.93.1.3 a.93.1.3 Back     alignment and structure
>2vcn_A Ascorbate peroxidase; INH, APX, isoniazid, oxidoreductase; HET: HEM ISZ; 1.20A {Glycine max} PDB: 2ggn_X* 2ghd_X* 2ghe_X* 2ghc_X* 2vnx_X* 2vnz_X* 2vo2_X* 2wd4_A* 1oaf_A* 1oag_A* 1v0h_X* 2ghh_X* 2ghk_X* 2vcf_X* 2cl4_X* 2vcs_A* 2xi6_A* 2xif_A* 2xih_A* 2xj6_A* ... Back     alignment and structure
>3fmu_A VersatIle peroxidase VPL2; class II (fungal) peroxidases, protoporphyrin IX, electron T lignin peroxidase, lignin degradation; HET: HEM; 1.04A {Pleurotus eryngii} PDB: 3fjw_A* 2boq_A* 3fm1_A* 3fm4_A* 3fm6_A* 3fkg_A* 2w23_A* 2vka_A* 4fcn_A* 4g05_A* 4fcs_A* 4fef_A* 4fdq_A* Back     alignment and structure
>3m5q_A Manganese peroxidase 1; heme, Mn(II)-binding site, Ca(II)-binding site, glycosylation, ultrahigh resolution, calcium; HET: NAG MAN HEM; 0.93A {Phanerochaete chrysosporium} SCOP: a.93.1.1 PDB: 1mnp_A* 1yyg_A* 1yzp_A* 1yzr_A* 1yyd_A* 3m8m_A* 1mn1_A* 1mn2_A* Back     alignment and structure
>3q3u_A Lignin peroxidase; oxidoreductase; HET: HEM; 1.85A {Trametes cervina} SCOP: a.93.1.0 Back     alignment and structure
>3riv_A Ascorbate peroxidase; alpha helical bundle, heme peroxidase, oxidoreductase; HET: HEM; 1.76A {Leishmania major} PDB: 3riw_A* 4ged_A* Back     alignment and structure
>3ut2_A Catalase-peroxidase 2; KATG, fungal, heme enzyme, oxidoreducta; HET: TOX HEM; 1.55A {Magnaporthe oryzae 70-15} Back     alignment and structure
>3n3r_A Catalase-peroxidase; E198A variant, tuberclosis, isonicotini hydrazide binding, oxidoreductase; HET: TOX HEM; 1.60A {Burkholderia pseudomallei} PDB: 3n3s_A* 3n3o_A* 2fxj_A* 3n3p_A* 2fxg_A* 3n3n_A* 2fxh_A* 2dv2_A* 3n3q_A* 2dv1_A* 1x7u_A* 1mwv_A* 2b2o_A* 2b2q_A* 2b2r_A* 2b2s_A* Back     alignment and structure
>3vli_A Catalase-peroxidase 2; oxidoreductase; HET: HEM; 1.70A {Haloarcula marismortui} PDB: 3vlh_A* 3vlj_A* 3vlk_A* 3vll_A* 3uw8_A* 3vlm_A* 1itk_A* Back     alignment and structure
>3e2o_A CCP, cytochrome C peroxidase; cytochrome C peroxidase (CCP), heme, hydrogen peroxide, iron, metal-binding, mitochondrion; HET: HEM; 1.06A {Saccharomyces cerevisiae} SCOP: a.93.1.1 PDB: 4a71_A* 1z53_A* 1kok_A* 1sbm_A* 1sdq_A* 1s73_A* 1zby_A* 1zbz_A* 2b0z_A* 2b10_A* 2b11_A* 2b12_A* 2cyp_A* 2ycg_A* 4a6z_A* 2v23_A* 1ebe_A* 3r98_A* 3r99_A* 1mkr_A* ... Back     alignment and structure
>1u2k_A Peroxidase/catalase HPI; KATG, catalase-peroxidase, C-terminal domain, oxidoreductase; 2.00A {Escherichia coli} SCOP: a.93.1.3 PDB: 1u2l_A 1u2j_A Back     alignment and structure
>1ub2_A Catalase-peroxidase; KATG, cyanobacteria, oxidoreductase; HET: HEM; 2.40A {Synechococcus elongatus} SCOP: a.93.1.3 a.93.1.3 Back     alignment and structure
>2cca_A Peroxidase/catalase T; oxidoreductase, catalase-peroxidase, KATG, heme, hydrogen peroxide, iron, metal-binding, organic radical; HET: HEM; 2.0A {Mycobacterium tuberculosis} SCOP: a.93.1.3 a.93.1.3 PDB: 1sj2_A* 2ccd_A* Back     alignment and structure
>1itk_A Catalase-peroxidase; heme protein, oxidoreductase; HET: HEM; 2.00A {Haloarcula marismortui} SCOP: a.93.1.3 a.93.1.3 Back     alignment and structure
>3rrw_A Thylakoid lumenal 29 kDa protein, chloroplastic; chloroplast thylakoid lumen, plant protein; 2.50A {Arabidopsis thaliana} Back     alignment and structure
>3vli_A Catalase-peroxidase 2; oxidoreductase; HET: HEM; 1.70A {Haloarcula marismortui} PDB: 3vlh_A* 3vlj_A* 3vlk_A* 3vll_A* 3uw8_A* 3vlm_A* 1itk_A* Back     alignment and structure
>3ut2_A Catalase-peroxidase 2; KATG, fungal, heme enzyme, oxidoreducta; HET: TOX HEM; 1.55A {Magnaporthe oryzae 70-15} Back     alignment and structure
>3n3r_A Catalase-peroxidase; E198A variant, tuberclosis, isonicotini hydrazide binding, oxidoreductase; HET: TOX HEM; 1.60A {Burkholderia pseudomallei} PDB: 3n3s_A* 3n3o_A* 2fxj_A* 3n3p_A* 2fxg_A* 3n3n_A* 2fxh_A* 2dv2_A* 3n3q_A* 2dv1_A* 1x7u_A* 1mwv_A* 2b2o_A* 2b2q_A* 2b2r_A* 2b2s_A* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 307
d1bgpa_309 a.93.1.1 (A:) Plant peroxidase {Barley (Hordeum vu 3e-81
d1pa2a_306 a.93.1.1 (A:) Plant peroxidase {Mouse-ear cress (A 6e-80
d1fhfa_304 a.93.1.1 (A:) Plant peroxidase {Soybean (Glycine m 2e-77
d1scha_294 a.93.1.1 (A:) Plant peroxidase {Peanut (Arachis hy 2e-75
d1qgja_300 a.93.1.1 (A:) Plant peroxidase {Mouse-ear cress (A 2e-74
d1gwua_307 a.93.1.1 (A:) Plant peroxidase {Horseradish (Armor 2e-72
d2e39a1336 a.93.1.1 (A:9-344) Fungal peroxidase (ligninase) { 6e-35
d1yyda1357 a.93.1.1 (A:1-357) Fungal peroxidase (ligninase) { 1e-34
d1llpa_343 a.93.1.1 (A:) Fungal peroxidase (ligninase) {White 4e-34
d2euta1291 a.93.1.1 (A:4-294) Cytochrome c peroxidase, CCP {B 4e-29
d1oafa_250 a.93.1.1 (A:) Ascorbate peroxidase {Soybean (Glyci 3e-25
d1iyna_275 a.93.1.1 (A:) Ascorbate peroxidase {Common tobacco 2e-22
d1itka2308 a.93.1.3 (A:424-731) Catalase-peroxidase KatG {Arc 2e-07
d1ub2a2294 a.93.1.3 (A:427-720) Catalase-peroxidase KatG {Syn 4e-07
d1mwva2308 a.93.1.3 (A:441-748) Catalase-peroxidase KatG {Bur 1e-06
d1itka1406 a.93.1.3 (A:18-423) Catalase-peroxidase KatG {Arch 2e-06
d2ccaa1410 a.93.1.3 (A:26-435) Catalase-peroxidase KatG {Myco 4e-06
d1u2ka_292 a.93.1.3 (A:) Catalase-peroxidase KatG {Burkholder 7e-06
d1mwva1406 a.93.1.3 (A:35-440) Catalase-peroxidase KatG {Burk 4e-04
>d1bgpa_ a.93.1.1 (A:) Plant peroxidase {Barley (Hordeum vulgare), peroxidase 1 [TaxId: 4513]} Length = 309 Back     information, alignment and structure

class: All alpha proteins
fold: Heme-dependent peroxidases
superfamily: Heme-dependent peroxidases
family: CCP-like
domain: Plant peroxidase
species: Barley (Hordeum vulgare), peroxidase 1 [TaxId: 4513]

 Score =  246 bits (629), Expect = 3e-81
 Identities = 97/303 (32%), Positives = 147/303 (48%), Gaps = 36/303 (11%)

Query: 31  PGLVMNFYKDTCPQAEDIIREQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTR 90
           PGL  +FY  TCP+AE I+RE V+   ++    A   LR  FHDC VQ CDAS+LLD + 
Sbjct: 7   PGLSFDFYWQTCPRAESIVREFVQEAVRKDIGLAAGLLRLHFHDCFVQGCDASVLLDGSA 66

Query: 91  KTLSEKEMDRSFGMRNF-------------------------------RDGVVALGGPYI 119
               E++   +  +R                                 RD VV  GGP  
Sbjct: 67  TGPGEQQAPPNLTLRPSAFKAVNDIRDRLERECRGAVVSCSDILALAARDSVVVSGGPDY 126

Query: 120 PLKTGRRDGRKSRAEI-LEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHC 178
            +  GRRD R   +   +   LP  + ++  +L     +G+DA  LV + G H++G  HC
Sbjct: 127 RVPLGRRDSRSFASTQDVLSDLPGPSSNVQSLLALLGRLGLDATDLVTISGGHTIGLAHC 186

Query: 179 VKLVHRLYPEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILD 238
                RL+P  DP ++P  +  +   CP    D + V     D  TP V DN YY ++++
Sbjct: 187 SSFEDRLFPRPDPTISPTFLSRLKRTCPAKGTDRRTVL----DVRTPNVFDNKYYIDLVN 242

Query: 239 NKGLMMVDHQLATDKRTRPYVKKMAKSQDYFFKEFSRAITLLSENNPLTGTKGEIRKVCN 298
            +GL + D  L T+  TRP V++ A+SQ  FF++F  +I  + +    T  +GE+R+ C+
Sbjct: 243 REGLFVSDQDLFTNAITRPIVERFAQSQQDFFEQFGVSIGKMGQMRVRTSDQGEVRRNCS 302

Query: 299 LAN 301
           + N
Sbjct: 303 VRN 305
>d1pa2a_ a.93.1.1 (A:) Plant peroxidase {Mouse-ear cress (Arabidopsis thaliana), peroxidase A2 [TaxId: 3702]} Length = 306 Back     information, alignment and structure
>d1fhfa_ a.93.1.1 (A:) Plant peroxidase {Soybean (Glycine max) [TaxId: 3847]} Length = 304 Back     information, alignment and structure
>d1scha_ a.93.1.1 (A:) Plant peroxidase {Peanut (Arachis hypogaea) [TaxId: 3818]} Length = 294 Back     information, alignment and structure
>d1qgja_ a.93.1.1 (A:) Plant peroxidase {Mouse-ear cress (Arabidopsis thaliana), peroxidase N [TaxId: 3702]} Length = 300 Back     information, alignment and structure
>d1gwua_ a.93.1.1 (A:) Plant peroxidase {Horseradish (Armoracia rusticana) [TaxId: 3704]} Length = 307 Back     information, alignment and structure
>d2e39a1 a.93.1.1 (A:9-344) Fungal peroxidase (ligninase) {Arthromyces ramosus [TaxId: 5451]} Length = 336 Back     information, alignment and structure
>d1yyda1 a.93.1.1 (A:1-357) Fungal peroxidase (ligninase) {Basidomycetos fungus (Phanerochaete chrysosporium) [TaxId: 5306]} Length = 357 Back     information, alignment and structure
>d1llpa_ a.93.1.1 (A:) Fungal peroxidase (ligninase) {White rot basidiomycete (Phanerochaete chrysosporium) [TaxId: 5306]} Length = 343 Back     information, alignment and structure
>d2euta1 a.93.1.1 (A:4-294) Cytochrome c peroxidase, CCP {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 291 Back     information, alignment and structure
>d1oafa_ a.93.1.1 (A:) Ascorbate peroxidase {Soybean (Glycine max) [TaxId: 3847]} Length = 250 Back     information, alignment and structure
>d1iyna_ a.93.1.1 (A:) Ascorbate peroxidase {Common tobacco (Nicotiana tabacum) [TaxId: 4097]} Length = 275 Back     information, alignment and structure
>d1itka2 a.93.1.3 (A:424-731) Catalase-peroxidase KatG {Archaeon Haloarcula marismortui [TaxId: 2238]} Length = 308 Back     information, alignment and structure
>d1ub2a2 a.93.1.3 (A:427-720) Catalase-peroxidase KatG {Synechococcus sp. pcc 7942 [TaxId: 1140]} Length = 294 Back     information, alignment and structure
>d1mwva2 a.93.1.3 (A:441-748) Catalase-peroxidase KatG {Burkholderia pseudomallei [TaxId: 28450]} Length = 308 Back     information, alignment and structure
>d1itka1 a.93.1.3 (A:18-423) Catalase-peroxidase KatG {Archaeon Haloarcula marismortui [TaxId: 2238]} Length = 406 Back     information, alignment and structure
>d2ccaa1 a.93.1.3 (A:26-435) Catalase-peroxidase KatG {Mycobacterium tuberculosis [TaxId: 1773]} Length = 410 Back     information, alignment and structure
>d1u2ka_ a.93.1.3 (A:) Catalase-peroxidase KatG {Burkholderia pseudomallei [TaxId: 28450]} Length = 292 Back     information, alignment and structure
>d1mwva1 a.93.1.3 (A:35-440) Catalase-peroxidase KatG {Burkholderia pseudomallei [TaxId: 28450]} Length = 406 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query307
d1fhfa_304 Plant peroxidase {Soybean (Glycine max) [TaxId: 38 100.0
d1pa2a_306 Plant peroxidase {Mouse-ear cress (Arabidopsis tha 100.0
d1bgpa_309 Plant peroxidase {Barley (Hordeum vulgare), peroxi 100.0
d1qgja_300 Plant peroxidase {Mouse-ear cress (Arabidopsis tha 100.0
d1gwua_307 Plant peroxidase {Horseradish (Armoracia rusticana 100.0
d1scha_294 Plant peroxidase {Peanut (Arachis hypogaea) [TaxId 100.0
d1iyna_275 Ascorbate peroxidase {Common tobacco (Nicotiana ta 100.0
d1yyda1357 Fungal peroxidase (ligninase) {Basidomycetos fungu 100.0
d2e39a1336 Fungal peroxidase (ligninase) {Arthromyces ramosus 100.0
d1llpa_343 Fungal peroxidase (ligninase) {White rot basidiomy 100.0
d1oafa_250 Ascorbate peroxidase {Soybean (Glycine max) [TaxId 100.0
d2euta1291 Cytochrome c peroxidase, CCP {Baker's yeast (Sacch 100.0
d1mwva2308 Catalase-peroxidase KatG {Burkholderia pseudomalle 99.97
d1ub2a2294 Catalase-peroxidase KatG {Synechococcus sp. pcc 79 99.96
d1u2ka_292 Catalase-peroxidase KatG {Burkholderia pseudomalle 99.95
d1itka2308 Catalase-peroxidase KatG {Archaeon Haloarcula mari 99.95
d1itka1406 Catalase-peroxidase KatG {Archaeon Haloarcula mari 99.95
d1mwva1406 Catalase-peroxidase KatG {Burkholderia pseudomalle 99.95
d2ccaa1410 Catalase-peroxidase KatG {Mycobacterium tuberculos 99.95
d1ub2a1406 Catalase-peroxidase KatG {Synechococcus sp. pcc 79 99.92
d2ccaa2285 Catalase-peroxidase KatG {Mycobacterium tuberculos 99.86
>d1fhfa_ a.93.1.1 (A:) Plant peroxidase {Soybean (Glycine max) [TaxId: 3847]} Back     information, alignment and structure
class: All alpha proteins
fold: Heme-dependent peroxidases
superfamily: Heme-dependent peroxidases
family: CCP-like
domain: Plant peroxidase
species: Soybean (Glycine max) [TaxId: 3847]

Probab=100.00  E-value=8.4e-93  Score=669.15  Aligned_cols=268  Identities=32%  Similarity=0.537  Sum_probs=255.8

Q ss_pred             CCCcccccccCchHHHHHHHHHHHHHHhCcCcccchhhhhhcccCCCCCCCccccccccCccccccccCCCC-Ccccc--
Q 021841           32 GLVMNFYKDTCPQAEDIIREQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEMDRSFG-MRNFR--  108 (307)
Q Consensus        32 ~L~~~fY~~sCP~~e~iVr~~v~~~~~~d~~~aa~lLRL~FHDCfv~GCDaSiLL~~~~~~~~Ek~a~~N~~-lrgf~--  108 (307)
                      ||+++||++|||++|+|||++|++++.+||+++|+|||||||||||+||||||||++++.+.+|+++++|.+ ++||+  
T Consensus         1 qL~~~~Y~~sCp~~e~iV~~~v~~~~~~d~~~aa~llRL~FHDCfv~GCDgSill~~~~~~~~E~~~~~N~~~~~g~~~i   80 (304)
T d1fhfa_           1 QLTPTFYRETCPNLFPIVFGVIFDASFTDPRIGASLMRLHFHDCFVQGCDGSVLLNNTDTIESEQDALPNINSIRGLDVV   80 (304)
T ss_dssp             CCBTTTTTTTSTTHHHHHHHHHHHTTSSCTTHHHHHHHHHHHHHTTTCSSSGGGCCCCSSCCCGGGSTTTTTTCCCHHHH
T ss_pred             CCCCccccccCcCHHHHHHHHHHHHHHhCCchhHHHHHHHHHhhccCCCCeeEeecCCCCccccccCCcccccchhHHHH
Confidence            799999999999999999999999999999999999999999999999999999999888889999999985 69997  


Q ss_pred             --------------------------ceeEecCCCccccCCCCCCCCCCchhhhccCCCCCCccHHHHHHHHHhcCCCcc
Q 021841          109 --------------------------DGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAP  162 (307)
Q Consensus       109 --------------------------daV~~~GGP~~~v~~GRrD~~~s~~~~a~~~LP~p~~~~~~l~~~F~~~Gl~~~  162 (307)
                                                |||+++|||.|+|++||+|+++|+..++..+||.|+.++++|++.|++||||.+
T Consensus        81 d~iK~~le~~cp~~VScADIlalAardAv~~~GGP~~~v~~GR~D~~~s~~~~~~~~lP~p~~~~~~l~~~F~~~Gl~~~  160 (304)
T d1fhfa_          81 NDIKTAVENSCPDTVSCADILAIAAEIASVLGGGPGWPVPLGRRDSLTANRTLANQNLPAPFFNLTQLKASFAVQGLNTL  160 (304)
T ss_dssp             HHHHHHHHTTSTTTSCHHHHHHHHHHHHHHTTTCCCCCCCBCCCBCSCCCHHHHHHHSCCTTCCHHHHHHHHHHTTCCHH
T ss_pred             HHHHHHHHhhCCCccCHHHHHHHHHhhhhhhcCCCcccccCCCcCcCccccccccccCCCCCCCHHHHHHHHHHcCCCHH
Confidence                                      789999999999999999999999988888999999999999999999999999


Q ss_pred             cceeeccccccccccccccccccCC-----CCCCCCCcchHhHhhhcCCCCCCCCCcccccccCCCCCcccchHHHHHHh
Q 021841          163 GLVALLGSHSVGRTHCVKLVHRLYP-----EVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNIL  237 (307)
Q Consensus       163 dlVaLsGaHTiG~ahc~~f~~Rly~-----~~dp~~d~~~~~~L~~~Cp~~~~~~~~~~~~~lD~~tp~~FDN~Yy~~l~  237 (307)
                      ||||||||||||++||.+|..|+|+     .+||++++.|+..|+..||....+.+.   +.+|..||.+|||+||++++
T Consensus       161 d~VaLsGaHTiG~ahc~~~~~rl~~~~~~~~~d~~~~~~~~~~L~~~c~~~~~~~~~---~~~d~~tp~~fDn~Yy~~l~  237 (304)
T d1fhfa_         161 DLVTLSGGHTFGRARCSTFINRLYNFSNTGNPDPTLNTTYLEVLRARCPQNATGDNL---TNLDLSTPDQFDNRYYSNLL  237 (304)
T ss_dssp             HHHHHGGGGGSCEEEGGGTGGGTSCGGGSSSCCTTSCHHHHHHHHHHSCSSCSSCCE---EESCSSSTTSCSTHHHHHHH
T ss_pred             HHHHHhhhhhhcccccccccccccCCCCCCCCCcccCHHHHHHHHHhcCCCCCCCcc---cccCCCCCCccccHHHHHHh
Confidence            9999999999999999999999996     689999999999999999976544444   58999999999999999999


Q ss_pred             cccCCcccccccccCc--CcHHHHHHHhhcHHHHHHHHHHHHHHhhhCCCCCCCCCccccccccccC
Q 021841          238 DNKGLMMVDHQLATDK--RTRPYVKKMAKSQDYFFKEFSRAITLLSENNPLTGTKGEIRKVCNLANK  302 (307)
Q Consensus       238 ~~~glL~SD~~L~~d~--~t~~~V~~~A~~~~~F~~~Fa~Am~Km~~i~v~tG~~GeiR~~C~~~N~  302 (307)
                      .++|+|+|||+|+.||  +|+++|++||.||+.|+++|++||+||++|+||||.+||||++|+++|.
T Consensus       238 ~~~glL~SD~~L~~dp~~~t~~~V~~yA~d~~~F~~~F~~Am~Km~~lgv~tg~~GeiR~~C~~~N~  304 (304)
T d1fhfa_         238 QLNGLLQSDQELFSTPGADTIPIVNSFSSNQNTFFSNFRVSMIKMGNIGVLTGDEGEIRLQCNFVNG  304 (304)
T ss_dssp             TTCCSSHHHHTTTSSTTCSSHHHHHHHHHCHHHHHHHHHHHHHHHTTTTCCCTTSSBCCSBTTBCCC
T ss_pred             hcCcccHhhHHHHhCCCchHHHHHHHHhhCHHHHHHHHHHHHHHHhcCCCCCCCCCcccCcccCcCC
Confidence            9999999999999996  7999999999999999999999999999999999999999999999994
>d1pa2a_ a.93.1.1 (A:) Plant peroxidase {Mouse-ear cress (Arabidopsis thaliana), peroxidase A2 [TaxId: 3702]} Back     information, alignment and structure
>d1bgpa_ a.93.1.1 (A:) Plant peroxidase {Barley (Hordeum vulgare), peroxidase 1 [TaxId: 4513]} Back     information, alignment and structure
>d1qgja_ a.93.1.1 (A:) Plant peroxidase {Mouse-ear cress (Arabidopsis thaliana), peroxidase N [TaxId: 3702]} Back     information, alignment and structure
>d1gwua_ a.93.1.1 (A:) Plant peroxidase {Horseradish (Armoracia rusticana) [TaxId: 3704]} Back     information, alignment and structure
>d1scha_ a.93.1.1 (A:) Plant peroxidase {Peanut (Arachis hypogaea) [TaxId: 3818]} Back     information, alignment and structure
>d1iyna_ a.93.1.1 (A:) Ascorbate peroxidase {Common tobacco (Nicotiana tabacum) [TaxId: 4097]} Back     information, alignment and structure
>d1yyda1 a.93.1.1 (A:1-357) Fungal peroxidase (ligninase) {Basidomycetos fungus (Phanerochaete chrysosporium) [TaxId: 5306]} Back     information, alignment and structure
>d2e39a1 a.93.1.1 (A:9-344) Fungal peroxidase (ligninase) {Arthromyces ramosus [TaxId: 5451]} Back     information, alignment and structure
>d1llpa_ a.93.1.1 (A:) Fungal peroxidase (ligninase) {White rot basidiomycete (Phanerochaete chrysosporium) [TaxId: 5306]} Back     information, alignment and structure
>d1oafa_ a.93.1.1 (A:) Ascorbate peroxidase {Soybean (Glycine max) [TaxId: 3847]} Back     information, alignment and structure
>d2euta1 a.93.1.1 (A:4-294) Cytochrome c peroxidase, CCP {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1mwva2 a.93.1.3 (A:441-748) Catalase-peroxidase KatG {Burkholderia pseudomallei [TaxId: 28450]} Back     information, alignment and structure
>d1ub2a2 a.93.1.3 (A:427-720) Catalase-peroxidase KatG {Synechococcus sp. pcc 7942 [TaxId: 1140]} Back     information, alignment and structure
>d1u2ka_ a.93.1.3 (A:) Catalase-peroxidase KatG {Burkholderia pseudomallei [TaxId: 28450]} Back     information, alignment and structure
>d1itka2 a.93.1.3 (A:424-731) Catalase-peroxidase KatG {Archaeon Haloarcula marismortui [TaxId: 2238]} Back     information, alignment and structure
>d1itka1 a.93.1.3 (A:18-423) Catalase-peroxidase KatG {Archaeon Haloarcula marismortui [TaxId: 2238]} Back     information, alignment and structure
>d1mwva1 a.93.1.3 (A:35-440) Catalase-peroxidase KatG {Burkholderia pseudomallei [TaxId: 28450]} Back     information, alignment and structure
>d2ccaa1 a.93.1.3 (A:26-435) Catalase-peroxidase KatG {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure
>d1ub2a1 a.93.1.3 (A:21-426) Catalase-peroxidase KatG {Synechococcus sp. pcc 7942 [TaxId: 1140]} Back     information, alignment and structure
>d2ccaa2 a.93.1.3 (A:436-720) Catalase-peroxidase KatG {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure