Citrus Sinensis ID: 021863

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300------
Protein Sequence
MSSGDRREAAPAAGEVKNGVVSGDLSQRQIQSEPASGVVAPSQNQRLRLNPSKDHKPESYDDMQLDFSPSIFSSLERYLPPPMLGLNREEKVKFMREILMKYLPQGERTRVQRHRDYRQKIITNYQPLHRELYNLHIGNFFVPPFVKAIQDNTEESFRSIISEPSPGVFTFEMLQPRFCELLLAEVENFEKWVNEAKFRIMRPNTMNKYGAVLDDFGLETMLDKLMETYIRPLSKVFFAEVGGSTLDSHHGFVVEYGKDRDVDLGFHVDDSEVTLNVCLGKQFTGGELFFRGTRCEKHVNTGSQTE
Secondary Structure (PSIPRED)
ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHccccccccccHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHccccccHHHHccccccccccHHHHHHHHccHHHHHHHHccccccEEEEEcccHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccHHHHHHHHHHHHcccHHHHccccccccccccccEEEEEEEccccccccccccccEEEEEEEcccccccccEEEEEcccccccccccccc
Secondary Structure Prediction (SSPRO)
cccHHHHHHHHHHcccccccccccccccccccccccccccccccHHHccccccccccccHHHccccccHHHHHHHHHHccHHHHHHcHHHHcHHHHHHHccccccccccHcHHcHHHHHHHHHHcccccHHHHcccHHHHccHHHHHHHHHccHHHHHHHcccccccEEEEEcccHHHHHHHHHHHHHHcccccccccccccccccccccEEHHccccHHHHHHHHHHHHHHHHHHHccccccccccHHcEEEEEEcccccccccccccccEEEEEEEEccccccccEEEEEEccccccccccccc
Coil and Loop (DISEMBL)
mssgdrreaapaagevkngvvsgdlsqrqiqsepasgvvapsqnqrlrlnpskdhkpesyddmqldfspsifsslerylpppmlglnrEEKVKFMREILMKYlpqgertrVQRHRDYRQKIITNYQPLHRELYNLhignffvppfvkaIQDNTEESFRSiisepspgvftfemLQPRFCELLLAEVENFEKWVNEAKFrimrpntmnkygavldDFGLETMLDKLMETYIRPLSKVFFAEvggstldshhgfvveygkdrdvdlgfhvddseVTLNVClgkqftggelffrgtrcekhvntgsqte
Flexible Loop (DISEMBL)
mssgdrreaapaagevkngvvsgDLSQRQIQSepasgvvapsqnqrlrlnpskdhkpesYDDMQLDFSPSIFSSLERYLPPPMLGLNREEKVKFMREILMKylpqgertrvqrhRDYRQKIITNYQPLHRELYNLHIGNFFVPPFVKAIQDNTEESFRSIISEPSPGVFTFEMLQPRFCELLLAEVENFEKWVNEAkfrimrpntmnKYGAVLDDFGLETMLDKLMETYIRPLSKVFFAEVGGSTLDSHHGFVVEYGKDRDVDLGFHVDDSEVTLNVCLGKQftggelffrgtrcekhvntgsqte
Low Complexity Region (SEG)
MSSGDRREAAPAAGEVKNGVVSGDLSQRQIQSEPASGVVAPSQNQRLRLNPSKDHKPESYDDMQLDFSPSIFSSLERYLPPPMLGLNREEKVKFMREILMKYLPQGERTRVQRHRDYRQKIITNYQPLHRELYNLHIGNFFVPPFVKAIQDNTEESFRSIISEPSPGVFTFEMLQPRFCELLLAEVENFEKWVNEAKFRIMRPNTMNKYGAVLDDFGLETMLDKLMETYIRPLSKVFFAEVGGSTLDSHHGFVVEYGKDRDVDLGFHVDDSEVTLNVCLGKQFTGGELFFRGTRCEKHVNTGSQTE
Disordered region (IsUnstruct)
**************************************************************************LERYLPPPMLGLNREEKVKFMREILMKYLPQGERTRVQRHRDYRQKIITNYQPLHRELYNLHIGNFFVPPFVKAIQDNTEESFRSIISEPSPGVFTFEMLQPRFCELLLAEVENFEKWVNEAKFRIMRPNTMNKYGAVLDDFGLETMLDKLMETYIRPLSKVFFAEVGGSTLDSHHGFVVEYGKDRDVDLGFHVDDSEVTLNVCLGKQFTGGELFFRGTRCE**********
Disordered Region (DISOPRED)
***********************************************************YDDMQLDFSPSIFSSLERYLPPP***********FMREILMKYLPQGE***********QKIITNYQPLHRELYNLHIGNFFVPPFVKAIQDNTEESFRSIISEPSPGVFTFEMLQPRFCELLLAEVENFEKW***************KYGAVLDDFGLETMLDKLMETYIRPLSKVFFAEVGGSTLDSHHGFVVEYGKDRDVDLGFHVDDSEVTLNVCLGKQFTGGELFFRGTRCE**********
Disordered Region (DISEMBL)
**************EVKNGVVSGDL****************SQNQRLRLNPSKDHKPESYDDMQLDFSPSIFSSLERYLPPPMLGLNREEKVKFMREILMKYLPQGERTRVQRHRDYRQKIITNYQPLHRELYNLHIGNFFVPPFVKAIQDNTEESFRSIISEPSPGVFTFEMLQPRFCELLLAEVENFEKWVNEAKFRIMRPNTMNKYGAVLDDFGLETMLDKLMETYIRPLSKVFFAEVGGSTLDSHHGFVVEYGKDRDVDLGFHVDDSEVTLNVCLGKQFTGGELFFRGTRCEK*********
Disordered Region (DISPRO)
*******************************************NQRLRLNPSKDHKPESYDDMQLDFSPSIFSSLERYLPPPMLGLNREEKVKFMREILMKYLPQGERTRVQRHRDYRQKIITNYQPLHRELYNLHIGNFFVPPFVKAIQDNTEESFRSIISEPSPGVFTFEMLQPRFCELLLAEVENFEKWVNEAKFRIMRPNTMNKYGAVLDDFGLETMLDKLMETYIRPLSKVFFAEVGGSTLDSHHGFVVEYGKDRDVDLGFHVDDSEVTLNVCLGKQFTGGELFFRGTRCEKHV*******
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MSSGDRREAAPAAGEVKNGVVSGDLSQRQIQSEPASGVVAPSQNQRLRLNPSKDHKPESYDDMQLDFSPSIFSSLERYLPPPMLGLNREEKVKFMREILMKYLPQGERTRVQRHRDYRQKIITNYQPLHRELYNLHIGNFFVPPFVKAIQDNTEESFRSIISEPSPGVFTFEMLQPRFCELLLAEVENFEKWVNEAKFRIMRPNTMNKYGAVLDDFGLETMLDKLMETYIRPLSKVFFAEVGGSTLDSHHGFVVEYGKDRDVDLGFHVDDSEVTLNVCLGKQFTGGELFFRGTRCEKHVNTGSQTE
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	306	2.2.26 [Sep-21-2011]
Q3ED68	397	Uncharacterized PKHD-type	no	no	0.843	0.649	0.593	7e-95
A3KGZ2	345	2-oxoglutarate and iron-d	yes	no	0.604	0.536	0.388	4e-30
Q28C22	349	2-oxoglutarate and iron-d	yes	no	0.549	0.481	0.388	5e-28
Q9CQ04	349	2-oxoglutarate and iron-d	yes	no	0.591	0.518	0.333	2e-24
Q6N063	350	2-oxoglutarate and iron-d	no	no	0.584	0.511	0.331	6e-24
Q20679	730	Procollagen-lysine,2-oxog	yes	no	0.441	0.184	0.251	1e-06
Q5R6K5	738	Procollagen-lysine,2-oxog	no	no	0.434	0.180	0.280	8e-06
O60568	738	Procollagen-lysine,2-oxog	no	no	0.434	0.180	0.280	8e-06
Q9R0B9	737	Procollagen-lysine,2-oxog	no	no	0.424	0.176	0.308	1e-05
Q9R0E1	741	Procollagen-lysine,2-oxog	no	no	0.431	0.178	0.275	2e-05

>sp|Q3ED68|Y1295_ARATH Uncharacterized PKHD-type hydroxylase At1g22950 OS=Arabidopsis thaliana GN=At1g22950 PE=2 SV=2

 Score =  347 bits (890), Expect = 7e-95,   Method: Compositional matrix adjust.
 Identities = 153/258 (59%), Positives = 207/258 (80%)

Query: 46  RLRLNPSKDHKPESYDDMQLDFSPSIFSSLERYLPPPMLGLNREEKVKFMREILMKYLPQ 105
           +LR  P+++H+PE+Y+D+ LD+SPS+F+SLERYLP  +L   R +K  FMR++L++Y P 
Sbjct: 39  KLRRTPNEEHEPENYEDLPLDYSPSLFTSLERYLPEQLLNSTRIDKASFMRDLLLRYSPD 98

Query: 106 GERTRVQRHRDYRQKIITNYQPLHRELYNLHIGNFFVPPFVKAIQDNTEESFRSIISEPS 165
            ER RV RH++YR KI+++YQ LH E+Y L   +FF P F+ A    +E +FRS + E  
Sbjct: 99  TERVRVLRHKEYRDKIMSSYQRLHGEIYTLDPSSFFAPSFLGAFSRKSEPNFRSSMVESY 158

Query: 166 PGVFTFEMLQPRFCELLLAEVENFEKWVNEAKFRIMRPNTMNKYGAVLDDFGLETMLDKL 225
           PG+FTFEM +P+FCE+LLAEVE+ EKWV +++  IMRPNTMN +G VLDDFG ++ML KL
Sbjct: 159 PGIFTFEMFKPQFCEMLLAEVEHMEKWVYDSRSTIMRPNTMNNFGVVLDDFGFDSMLQKL 218

Query: 226 METYIRPLSKVFFAEVGGSTLDSHHGFVVEYGKDRDVDLGFHVDDSEVTLNVCLGKQFTG 285
           ++ +I P+++V F EV G++LDSHHG++VEYGKDRDVDLGFHVDDSEV+LNVCLGKQF+G
Sbjct: 219 VDDFISPIAQVLFPEVCGTSLDSHHGYIVEYGKDRDVDLGFHVDDSEVSLNVCLGKQFSG 278

Query: 286 GELFFRGTRCEKHVNTGS 303
           GEL+FRG RC+KHVN+ S
Sbjct: 279 GELYFRGVRCDKHVNSDS 296

Arabidopsis thaliana (taxid: 3702)
EC: 1EC: .EC: 1EC: 4EC: .EC: 1EC: 1EC: .EC: -

>sp|A3KGZ2|OGFD2_DANRE 2-oxoglutarate and iron-dependent oxygenase domain-containing protein 2 OS=Danio rerio GN=ogfod2 PE=2 SV=1

 Score =  132 bits (332), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 78/201 (38%), Positives = 115/201 (57%), Gaps = 16/201 (7%)

Query: 105 QGERTRVQRHR---DYRQKIITN-YQPLHRELYNLHIGNFFVPPFVKAI------QDNTE 154
           Q E  R Q H+     R  +I   Y PLH+ +Y+L   +F  P  ++ +      + N +
Sbjct: 59  QAEIERRQNHKLKSTERAAVIKEIYTPLHQHVYHLQ-ESFLAPELLEMVKYCASSEANVQ 117

Query: 155 ESFRSIISEPSPGVFTFEMLQPRFCELLLAEVENFEKWVNEAKFRIMRPNTMNKYGAVLD 214
              + I +E +  VF F++ +  FC+ LL E+E+FE    ++     RPNTMN YG VL+
Sbjct: 118 GLLKLIQTEAASRVFRFQVFRKEFCKDLLEELEHFE----QSDAPKGRPNTMNNYGIVLN 173

Query: 215 DFGL-ETMLDKLMETYIRPLSKVFFAEVGGSTLDSHHGFVVEYGKDRDVDLGFHVDDSEV 273
           + G  E  +  L E Y+RPL+ + +++ GG+ LDSH  FVV+Y    D++L +H D+SEV
Sbjct: 174 ELGFDEGFITPLREVYLRPLTALLYSDCGGNCLDSHKAFVVKYDMHEDLNLSYHYDNSEV 233

Query: 274 TLNVCLGKQFTGGELFFRGTR 294
           TLNV LGK FT G LFF   R
Sbjct: 234 TLNVSLGKDFTEGNLFFGDMR 254

Danio rerio (taxid: 7955)

EC: 1

EC: .

EC: 1

EC: 4

EC: .

EC: 1

EC: 1

EC: .

EC: -

>sp|Q28C22|OGFD2_XENTR 2-oxoglutarate and iron-dependent oxygenase domain-containing protein 2 OS=Xenopus tropicalis GN=ogfod2 PE=2 SV=1

 Score =  125 bits (313), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 70/180 (38%), Positives = 102/180 (56%), Gaps = 12/180 (6%)

Query: 118 RQKIITNYQPLHRELYNLHIGNFFVPPFVKAI------QDNTEESFRSIISEPSPGVFTF 171
           R++I  +Y+PL+ E+Y L   +F    F+ A+      Q N E     + S     ++  
Sbjct: 80  RREISLHYKPLYPEVYVLQ-ESFLAAEFLTAVKYSKSPQANVEGLLHHLHSITDKRIYRL 138

Query: 172 EMLQPRFCELLLAEVENFEKWVNEAKFRIMRPNTMNKYGAVLDDFG-LETMLDKLMETYI 230
            +  P FC  L+ E+ENFE+    +     RPNTMN YG +L++ G ++ +   L E YI
Sbjct: 139 PVFIPEFCAKLVEELENFER----SDLPKGRPNTMNNYGILLNELGFVDALTAPLCEKYI 194

Query: 231 RPLSKVFFAEVGGSTLDSHHGFVVEYGKDRDVDLGFHVDDSEVTLNVCLGKQFTGGELFF 290
            PL+ + F + GG  LDSH  FVV+Y    D+DL  H D++EVTLNV LGK+FT G L+F
Sbjct: 195 EPLTSLLFPDWGGGCLDSHRAFVVKYALQEDLDLSCHYDNAEVTLNVSLGKEFTDGNLYF 254

Xenopus tropicalis (taxid: 8364)

EC: 1

EC: .

EC: 1

EC: 4

EC: .

EC: 1

EC: 1

EC: .

EC: -

>sp|Q9CQ04|OGFD2_MOUSE 2-oxoglutarate and iron-dependent oxygenase domain-containing protein 2 OS=Mus musculus GN=Ogfod2 PE=2 SV=1

 Score =  113 bits (282), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 66/198 (33%), Positives = 108/198 (54%), Gaps = 17/198 (8%)

Query: 106 GERTRVQRHRDYRQKII-TNYQPLHRELYNLHIGNFFVPPFVKAIQDNTE---------E 155
           G R R+ +    R+ +I ++Y P   E+Y+        P F+ A + +T          +
Sbjct: 68  GRRRRLGQESAVRKALIASSYHPARPEVYSSLQDAALAPEFMAAAEYSTSPGADLEGLLQ 127

Query: 156 SFRSIISEPSPGVFTFEMLQPRFCELLLAEVENFEKWVNEAKFRIMRPNTMNKYGAVLDD 215
              ++  E    ++   +   +FC+ LL E+E+FE    ++     RPNTMN +G ++ +
Sbjct: 128 RLETVSEEKR--IYRVPVFSAKFCQTLLEELEHFE----QSDMPKGRPNTMNNHGVLMYE 181

Query: 216 FGLET-MLDKLMETYIRPLSKVFFAEVGGSTLDSHHGFVVEYGKDRDVDLGFHVDDSEVT 274
            GL+  ++  L E ++ PL  + + + GG  LDSH  FVV+Y   +D+DLG H D++E+T
Sbjct: 182 LGLDDPLVTPLRERFLLPLMALLYPDYGGGYLDSHRAFVVKYALGQDLDLGCHYDNAELT 241

Query: 275 LNVCLGKQFTGGELFFRG 292
           LNV LGK FTGG L+F G
Sbjct: 242 LNVALGKDFTGGALYFGG 259

Mus musculus (taxid: 10090)

EC: 1

EC: .

EC: 1

EC: 4

EC: .

EC: 1

EC: 1

EC: .

EC: -

>sp|Q6N063|OGFD2_HUMAN 2-oxoglutarate and iron-dependent oxygenase domain-containing protein 2 OS=Homo sapiens GN=OGFOD2 PE=2 SV=2

 Score =  111 bits (278), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 65/196 (33%), Positives = 105/196 (53%), Gaps = 17/196 (8%)

Query: 108 RTRVQRHRDYRQKII-TNYQPLHRELYNLHIGNFFVPPFVKAIQDNTE---------ESF 157
           R R+ +    R+ +I ++Y P   E+Y+        P F+   + +           +  
Sbjct: 71  RQRLGQESAARKALIASSYHPARPEVYDSLQDAALAPEFLAVTEYSVSPDADLKGLLQRL 130

Query: 158 RSIISEPSPGVFTFEMLQPRFCELLLAEVENFEKWVNEAKFRIMRPNTMNKYGAVLDDFG 217
            ++  E    ++   +    FC+ LL E+E+FE    ++     RPNTMN YG +L + G
Sbjct: 131 ETVSEEKR--IYRVPVFTAPFCQALLEELEHFE----QSDMPKGRPNTMNNYGVLLHELG 184

Query: 218 L-ETMLDKLMETYIRPLSKVFFAEVGGSTLDSHHGFVVEYGKDRDVDLGFHVDDSEVTLN 276
           L E ++  L E +++PL  + + + GG  LDSH  FVV+Y   +D++LG H D++E+TLN
Sbjct: 185 LDEPLMTPLRERFLQPLMALLYPDCGGGRLDSHRAFVVKYAPGQDLELGCHYDNAELTLN 244

Query: 277 VCLGKQFTGGELFFRG 292
           V LGK FTGG L+F G
Sbjct: 245 VALGKVFTGGALYFGG 260

Homo sapiens (taxid: 9606)

EC: 1

EC: .

EC: 1

EC: 4

EC: .

EC: 1

EC: 1

EC: .

EC: -

>sp|Q20679|PLOD_CAEEL Procollagen-lysine,2-oxoglutarate 5-dioxygenase OS=Caenorhabditis elegans GN=let-268 PE=1 SV=1

 Score = 54.3 bits (129), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 36/143 (25%), Positives = 66/143 (46%), Gaps = 8/143 (5%)

Query: 160 IISEPSPGVFTFEMLQPRFCELLLAEVENFEKWV----NEAKFRIMRPNTMNKYGAVLDD 215
           ++ +  P V+ F ++  RFCE L+ E+E F +W     N+ +      N   +    ++ 
Sbjct: 549 VVDQACPDVYDFPLMSERFCEELIEEMEGFGRWSDGSNNDKRLAGGYENVPTR-DIHMNQ 607

Query: 216 FGLETMLDKLMETYIRPLSKVFFAEVGGSTLDSHHGFVVEYGKDRDVDLGFHVDDSEVTL 275
            G E      M+TY+RP+ +  F       ++S+  FVV Y  +    L  H D S  ++
Sbjct: 608 VGFERQWLYFMDTYVRPVQEKTFIGYYHQPVESNMMFVVRYKPEEQPSLRPHHDASTFSI 667

Query: 276 NVCL---GKQFTGGELFFRGTRC 295
           ++ L   G+ + GG + +    C
Sbjct: 668 DIALNKKGRDYEGGGVRYIRYNC 690

Forms hydroxylysine residues in collagen type IV.

Caenorhabditis elegans (taxid: 6239)

EC: 1

EC: .

EC: 1

EC: 4

EC: .

EC: 1

EC: 1

EC: .

EC: 4

>sp|Q5R6K5|PLOD3_PONAB Procollagen-lysine,2-oxoglutarate 5-dioxygenase 3 OS=Pongo abelii GN=PLOD3 PE=2 SV=1

 Score = 51.6 bits (122), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 41/146 (28%), Positives = 63/146 (43%), Gaps = 13/146 (8%)

Query: 159 SIISEPSPGVFTFEMLQPRFCELLLAEVENFEKWVNEAKFRIMRPNTMNKYGAV------ 212
            I+ +P P V+ F +L  + C+ L+AE+E++ +W   +  R         Y  V      
Sbjct: 557 GIVEQPCPDVYWFPLLSEQMCDELVAEMEHYGQW---SGGRHEDSRLAGGYENVPTVDIH 613

Query: 213 LDDFGLETMLDKLMETYIRPLSKVFFAEVGGSTLDSHHGFVVEYGKDRDVDLGFHVDDSE 272
           +   G E    +L+ TY+ P+++  F     +   +   FVV Y  D    L  H D S 
Sbjct: 614 MKQVGYEDQWLQLLRTYVGPMTESLFPGY-HTKARAVMNFVVRYRPDEQPSLRPHHDSST 672

Query: 273 VTLNVCL---GKQFTGGELFFRGTRC 295
            TLNV L   G  + GG   F    C
Sbjct: 673 FTLNVALNHKGLDYEGGGCRFLRYDC 698

Forms hydroxylysine residues in -Xaa-Lys-Gly- sequences in collagens. These hydroxylysines serve as sites of attachment for carbohydrate units and are essential for the stability of the intermolecular collagen cross-links.

Pongo abelii (taxid: 9601)

EC: 1

EC: .

EC: 1

EC: 4

EC: .

EC: 1

EC: 1

EC: .

EC: 4

>sp|O60568|PLOD3_HUMAN Procollagen-lysine,2-oxoglutarate 5-dioxygenase 3 OS=Homo sapiens GN=PLOD3 PE=1 SV=1

 Score = 51.2 bits (121), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 41/146 (28%), Positives = 63/146 (43%), Gaps = 13/146 (8%)

Query: 159 SIISEPSPGVFTFEMLQPRFCELLLAEVENFEKWVNEAKFRIMRPNTMNKYGAV------ 212
            I+ +P P V+ F +L  + C+ L+AE+E++ +W   +  R         Y  V      
Sbjct: 557 GIVEQPCPDVYWFPLLSEQMCDELVAEMEHYGQW---SGGRHEDSRLAGGYENVPTVDIH 613

Query: 213 LDDFGLETMLDKLMETYIRPLSKVFFAEVGGSTLDSHHGFVVEYGKDRDVDLGFHVDDSE 272
           +   G E    +L+ TY+ P+++  F     +   +   FVV Y  D    L  H D S 
Sbjct: 614 MKQVGYEDQWLQLLRTYVGPMTESLFPGY-HTKARAVMNFVVRYRPDEQPSLRPHHDSST 672

Query: 273 VTLNVCL---GKQFTGGELFFRGTRC 295
            TLNV L   G  + GG   F    C
Sbjct: 673 FTLNVALNHKGLDYEGGGCRFLRYDC 698

Forms hydroxylysine residues in -Xaa-Lys-Gly- sequences in collagens. These hydroxylysines serve as sites of attachment for carbohydrate units and are essential for the stability of the intermolecular collagen cross-links.

Homo sapiens (taxid: 9606)

EC: 1

EC: .

EC: 1

EC: 4

EC: .

EC: 1

EC: 1

EC: .

EC: 4

>sp|Q9R0B9|PLOD2_MOUSE Procollagen-lysine,2-oxoglutarate 5-dioxygenase 2 OS=Mus musculus GN=Plod2 PE=2 SV=2

 Score = 50.8 bits (120), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 46/149 (30%), Positives = 69/149 (46%), Gaps = 19/149 (12%)

Query: 159 SIISEPSPGVFTFEMLQPRFCELLLAEVENFEKWVNEAKFRIMRPNTMNKYGAVLDD--- 215
           +I+ +P P VF F +   R C+ L+ E+E++ KW +  K    R      Y  V  D   
Sbjct: 556 NIVEQPCPDVFWFPIFSERACDELVEEMEHYGKW-SGGKHHDSR--ISGGYENVPTDDIH 612

Query: 216 ---FGLETMLDKLMETYIRPLS-KVF--FAEVGGSTLDSHHGFVVEYGKDRDVDLGFHVD 269
               GLE +    +  +I P++ KVF  +   G + L+    FVV+Y  +R   L  H D
Sbjct: 613 MKQIGLENVWLHFIREFIAPVTLKVFAGYYTKGFALLN----FVVKYSPERQRSLRPHHD 668

Query: 270 DSEVTLNVCL---GKQFTGGELFFRGTRC 295
            S  T+N+ L   G+ F GG   F    C
Sbjct: 669 ASTFTINIALNNVGEDFQGGGCKFLRYNC 697

Forms hydroxylysine residues in -Xaa-Lys-Gly- sequences in collagens. These hydroxylysines serve as sites of attachment for carbohydrate units and are essential for the stability of the intermolecular collagen cross-links.

Mus musculus (taxid: 10090)

EC: 1

EC: .

EC: 1

EC: 4

EC: .

EC: 1

EC: 1

EC: .

EC: 4

>sp|Q9R0E1|PLOD3_MOUSE Procollagen-lysine,2-oxoglutarate 5-dioxygenase 3 OS=Mus musculus GN=Plod3 PE=1 SV=1

 Score = 50.1 bits (118), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 40/145 (27%), Positives = 62/145 (42%), Gaps = 13/145 (8%)

Query: 160 IISEPSPGVFTFEMLQPRFCELLLAEVENFEKWVNEAKFRIMRPNTMNKYGAV------L 213
           ++ +P P V+ F +L  + C+ L+ E+E++ +W   +  R         Y  V      +
Sbjct: 561 LVEQPCPDVYWFPLLTEQMCDELVEEMEHYGQW---SGGRHEDSRLAGGYENVPTVDIHM 617

Query: 214 DDFGLETMLDKLMETYIRPLSKVFFAEVGGSTLDSHHGFVVEYGKDRDVDLGFHVDDSEV 273
              G E    +L+ TY+ P+++  F      T  +   FVV Y  D    L  H D S  
Sbjct: 618 KQVGYEDQWLQLLRTYVGPMTEYLFPGYHTKT-RAVMNFVVRYRPDEQPSLRPHHDSSTF 676

Query: 274 TLNVCL---GKQFTGGELFFRGTRC 295
           TLNV L   G  + GG   F    C
Sbjct: 677 TLNVALNHKGVDYEGGGCRFLRYDC 701

Forms hydroxylysine residues in -Xaa-Lys-Gly- sequences in collagens. These hydroxylysines serve as sites of attachment for carbohydrate units and are essential for the stability of the intermolecular collagen cross-links.

Mus musculus (taxid: 10090)

EC: 1

EC: .

EC: 1

EC: 4

EC: .

EC: 1

EC: 1

EC: .

EC: 4

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	306
359490986	395	PREDICTED: uncharacterized PKHD-type hyd	0.954	0.739	0.754	1e-136
255567788	411	oxidoreductase, putative [Ricinus commun	0.990	0.737	0.727	1e-134
224135445	391	predicted protein [Populus trichocarpa]	0.957	0.749	0.759	1e-130
356531172	379	PREDICTED: uncharacterized PKHD-type hyd	0.852	0.688	0.793	1e-125
356520629	370	PREDICTED: uncharacterized PKHD-type hyd	0.898	0.743	0.754	1e-125
255570701	379	oxidoreductase, putative [Ricinus commun	0.879	0.709	0.744	1e-122
449458771	384	PREDICTED: uncharacterized PKHD-type hyd	0.888	0.708	0.731	1e-122
297834722	394	oxidoreductase [Arabidopsis lyrata subsp	0.937	0.728	0.693	1e-121
217075821	371	unknown [Medicago truncatula]	0.885	0.730	0.753	1e-121
357500135	371	PKHD-type hydroxylase, putative [Medicag	0.885	0.730	0.753	1e-121

>gi|359490986|ref|XP_002277437.2| PREDICTED: uncharacterized PKHD-type hydroxylase At1g22950-like [Vitis vinifera]

 Score =  489 bits (1258), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 237/314 (75%), Positives = 266/314 (84%), Gaps = 22/314 (7%)

Query: 3   SGDRREAAP-----AAGEVK-----NGVVSGDLSQRQIQSEPASGVVAPSQNQRLRLNPS 52
           S DRRE  P      +G +      NGVVSGD S+  + S            QRLRLNP+
Sbjct: 6   SADRREDPPPPQNNGSGAIASIGGGNGVVSGDSSRPFVPS------------QRLRLNPN 53

Query: 53  KDHKPESYDDMQLDFSPSIFSSLERYLPPPMLGLNREEKVKFMREILMKYLPQGERTRVQ 112
           KDHKP++YDD+QLDF+PSIFSSLERYLPP ML ++RE KV+FMREIL++YLPQGE+TR Q
Sbjct: 54  KDHKPDNYDDLQLDFNPSIFSSLERYLPPSMLSVSREAKVQFMREILLRYLPQGEQTRAQ 113

Query: 113 RHRDYRQKIITNYQPLHRELYNLHIGNFFVPPFVKAIQDNTEESFRSIISEPSPGVFTFE 172
           RHR+YRQKII+NYQPLHRELY +H   FF P F+KAI DNTEESFRSI+SEPSPGV+TFE
Sbjct: 114 RHREYRQKIISNYQPLHRELYAMHPATFFAPQFLKAINDNTEESFRSIMSEPSPGVYTFE 173

Query: 173 MLQPRFCELLLAEVENFEKWVNEAKFRIMRPNTMNKYGAVLDDFGLETMLDKLMETYIRP 232
           M QP FCELLL EVENFE WVNEAKFRIMRPNTMNK+GAVLDDFGLETMLDKLME +IRP
Sbjct: 174 MFQPHFCELLLHEVENFENWVNEAKFRIMRPNTMNKFGAVLDDFGLETMLDKLMEGFIRP 233

Query: 233 LSKVFFAEVGGSTLDSHHGFVVEYGKDRDVDLGFHVDDSEVTLNVCLGKQFTGGELFFRG 292
           +SKVFF+EVGGSTLDSHHGFVVEYGKDRDVDLGFHVDDSEVTLNVCLGK+F+GGELFFRG
Sbjct: 234 ISKVFFSEVGGSTLDSHHGFVVEYGKDRDVDLGFHVDDSEVTLNVCLGKEFSGGELFFRG 293

Query: 293 TRCEKHVNTGSQTE 306
           TRC+KHVNTGSQ+E
Sbjct: 294 TRCDKHVNTGSQSE 307

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255567788|ref|XP_002524872.1| oxidoreductase, putative [Ricinus communis] gi|223535835|gb|EEF37496.1| oxidoreductase, putative [Ricinus communis]

 Score =  482 bits (1241), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 235/323 (72%), Positives = 267/323 (82%), Gaps = 20/323 (6%)

Query: 3   SGDRREAAPAAGEVKNGVVSGDLSQRQIQSEPASG-------------------VVAPSQ 43
           S D REA P  GE  NGVV+   S +Q  +  A+                    V + + 
Sbjct: 2   SVDHREATPVTGE-GNGVVAAVESVKQTNTATATATTTTAATTTTTTTTNAPVVVGSVTA 60

Query: 44  NQRLRLNPSKDHKPESYDDMQLDFSPSIFSSLERYLPPPMLGLNREEKVKFMREILMKYL 103
           +QRLRLNP+KDHKPESY+D+QLDF PS+FSSLERYLPP ML ++RE KVKFMR+IL+KYL
Sbjct: 61  SQRLRLNPNKDHKPESYEDLQLDFCPSVFSSLERYLPPSMLSVSRENKVKFMRDILLKYL 120

Query: 104 PQGERTRVQRHRDYRQKIITNYQPLHRELYNLHIGNFFVPPFVKAIQDNTEESFRSIISE 163
           P GERTR QR R+YRQKII+NYQPL+RELY +H  +FFVP F+KAI DNTEESFR I+SE
Sbjct: 121 PHGERTRAQRQREYRQKIISNYQPLNRELYAMHPSSFFVPSFIKAINDNTEESFRHIMSE 180

Query: 164 PSPGVFTFEMLQPRFCELLLAEVENFEKWVNEAKFRIMRPNTMNKYGAVLDDFGLETMLD 223
           PSPGVFTFEMLQP FC LLL+EVENFEKWVN++KFRIMRPNTMNKYGAVLDDFGLETMLD
Sbjct: 181 PSPGVFTFEMLQPHFCNLLLSEVENFEKWVNDSKFRIMRPNTMNKYGAVLDDFGLETMLD 240

Query: 224 KLMETYIRPLSKVFFAEVGGSTLDSHHGFVVEYGKDRDVDLGFHVDDSEVTLNVCLGKQF 283
           KLM+ +IRP+SKVFF EVGGSTLDSHHGFVVEYGKDRDVDLGFHVDDSEVTLNVCLGKQF
Sbjct: 241 KLMDGFIRPISKVFFPEVGGSTLDSHHGFVVEYGKDRDVDLGFHVDDSEVTLNVCLGKQF 300

Query: 284 TGGELFFRGTRCEKHVNTGSQTE 306
           +GG+LFFRG RC+KHVNTGSQ+E
Sbjct: 301 SGGDLFFRGIRCDKHVNTGSQSE 323

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224135445|ref|XP_002322075.1| predicted protein [Populus trichocarpa] gi|222869071|gb|EEF06202.1| predicted protein [Populus trichocarpa]

 Score =  471 bits (1213), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 231/304 (75%), Positives = 261/304 (85%), Gaps = 11/304 (3%)

Query: 3   SGDRREAAPAAGEVKNGVVSGDLSQRQIQSEPASGVVAPSQNQRLRLNPSKDHKPESYDD 62
           SGDRRE+ P  G   NGVV       + + +PA  V+ PSQ  RLRL+ +KDH PESY+D
Sbjct: 2   SGDRRESPPVTGG-GNGVV-------EPEKKPAP-VIVPSQ--RLRLHANKDHMPESYED 50

Query: 63  MQLDFSPSIFSSLERYLPPPMLGLNREEKVKFMREILMKYLPQGERTRVQRHRDYRQKII 122
           +QLDF PSIFSSLE+YLPP ML  +REEKVKFMR+IL+KYLP GERTR Q+HR+YRQKII
Sbjct: 51  LQLDFCPSIFSSLEKYLPPNMLHDSREEKVKFMRDILLKYLPHGERTRAQKHREYRQKII 110

Query: 123 TNYQPLHRELYNLHIGNFFVPPFVKAIQDNTEESFRSIISEPSPGVFTFEMLQPRFCELL 182
           ++Y+PL RELY +H   FFVP F+KAI DNTE+S RSIISEPSPGV TFEMLQPRFCELL
Sbjct: 111 SHYKPLKRELYTMHPVTFFVPSFMKAINDNTEDSLRSIISEPSPGVLTFEMLQPRFCELL 170

Query: 183 LAEVENFEKWVNEAKFRIMRPNTMNKYGAVLDDFGLETMLDKLMETYIRPLSKVFFAEVG 242
           +AEVENFE WVN+ KFRIMRPNTMNKYGAVLDDFGLETMLDKLM+ +IRP+SKVFF +VG
Sbjct: 171 VAEVENFEAWVNDTKFRIMRPNTMNKYGAVLDDFGLETMLDKLMDGFIRPISKVFFPDVG 230

Query: 243 GSTLDSHHGFVVEYGKDRDVDLGFHVDDSEVTLNVCLGKQFTGGELFFRGTRCEKHVNTG 302
           G+TLDSHHGFVVEYGKD DVDLGFHVDDSEVTLNVCLGKQF+GGELFFRGTRC+KHVNTG
Sbjct: 231 GATLDSHHGFVVEYGKDWDVDLGFHVDDSEVTLNVCLGKQFSGGELFFRGTRCDKHVNTG 290

Query: 303 SQTE 306
           SQ E
Sbjct: 291 SQPE 294

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356531172|ref|XP_003534152.1| PREDICTED: uncharacterized PKHD-type hydroxylase At1g22950-like [Glycine max]

 Score =  454 bits (1167), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 207/261 (79%), Positives = 236/261 (90%)

Query: 46  RLRLNPSKDHKPESYDDMQLDFSPSIFSSLERYLPPPMLGLNREEKVKFMREILMKYLPQ 105
           RLRLNP+K+HKP+ Y+DMQLDFSP+IFSSLERYLPP ML + R+EK  FMREIL+KYLP 
Sbjct: 31  RLRLNPNKEHKPDGYEDMQLDFSPNIFSSLERYLPPSMLNVPRDEKANFMREILLKYLPL 90

Query: 106 GERTRVQRHRDYRQKIITNYQPLHRELYNLHIGNFFVPPFVKAIQDNTEESFRSIISEPS 165
           GER R Q+HR+YR++II NYQPLHRELY++    FFVP F++AI DNTE+S RSI+SEPS
Sbjct: 91  GERNRAQKHREYRERIIANYQPLHRELYSVDPATFFVPTFLRAINDNTEQSIRSIVSEPS 150

Query: 166 PGVFTFEMLQPRFCELLLAEVENFEKWVNEAKFRIMRPNTMNKYGAVLDDFGLETMLDKL 225
           PG+F F++ Q  FCELLL+E+ENFEKWVNE KFRIMRPNTMNK+GAVLDDFGLETMLDKL
Sbjct: 151 PGIFIFDIFQTHFCELLLSEIENFEKWVNETKFRIMRPNTMNKFGAVLDDFGLETMLDKL 210

Query: 226 METYIRPLSKVFFAEVGGSTLDSHHGFVVEYGKDRDVDLGFHVDDSEVTLNVCLGKQFTG 285
           ME +IRPLS+VFFAEVGGSTLDSHHGFVVEYGKDRDVDLGFHVDDSEVTLNVCLGKQF+G
Sbjct: 211 MEGFIRPLSRVFFAEVGGSTLDSHHGFVVEYGKDRDVDLGFHVDDSEVTLNVCLGKQFSG 270

Query: 286 GELFFRGTRCEKHVNTGSQTE 306
           GELFFRG RCEKHVNTG+ +E
Sbjct: 271 GELFFRGIRCEKHVNTGTHSE 291

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356520629|ref|XP_003528963.1| PREDICTED: uncharacterized PKHD-type hydroxylase At1g22950-like [Glycine max]

 Score =  453 bits (1165), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 209/277 (75%), Positives = 240/277 (86%), Gaps = 2/277 (0%)

Query: 32  SEPASGVVAPSQNQ--RLRLNPSKDHKPESYDDMQLDFSPSIFSSLERYLPPPMLGLNRE 89
           S   +G VA +     RLRLNP+K+HKP+ Y+DMQLDFSP+IFSSLERYLPP ML + R+
Sbjct: 6   SASGNGTVAAASTASLRLRLNPNKEHKPDGYEDMQLDFSPNIFSSLERYLPPSMLNVTRD 65

Query: 90  EKVKFMREILMKYLPQGERTRVQRHRDYRQKIITNYQPLHRELYNLHIGNFFVPPFVKAI 149
           EK KFMREIL+KYLP GER R Q+HR+YR++II NYQPLH ELY++    FFVP F++AI
Sbjct: 66  EKAKFMREILLKYLPLGERNRAQKHREYRERIIANYQPLHLELYSVDPAAFFVPTFLRAI 125

Query: 150 QDNTEESFRSIISEPSPGVFTFEMLQPRFCELLLAEVENFEKWVNEAKFRIMRPNTMNKY 209
            DNTE+S+RSI+SEP PG+F F++ Q  FCELLL+E+ENFEKWV E KFRIM PNTMNK+
Sbjct: 126 NDNTEQSYRSIVSEPFPGIFIFDIFQTHFCELLLSEIENFEKWVTETKFRIMHPNTMNKF 185

Query: 210 GAVLDDFGLETMLDKLMETYIRPLSKVFFAEVGGSTLDSHHGFVVEYGKDRDVDLGFHVD 269
           GAVLDDFGLETMLDKLME +IRPLS+VFFAEVGGSTLDSHHGFVVEYGKDRDVDLGFHVD
Sbjct: 186 GAVLDDFGLETMLDKLMEGFIRPLSRVFFAEVGGSTLDSHHGFVVEYGKDRDVDLGFHVD 245

Query: 270 DSEVTLNVCLGKQFTGGELFFRGTRCEKHVNTGSQTE 306
           DSEVTLNVCLGKQF+GGELFFRG RCEKHVNTGS +E
Sbjct: 246 DSEVTLNVCLGKQFSGGELFFRGVRCEKHVNTGSHSE 282

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255570701|ref|XP_002526305.1| oxidoreductase, putative [Ricinus communis] gi|223534386|gb|EEF36094.1| oxidoreductase, putative [Ricinus communis]

 Score =  444 bits (1143), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 201/270 (74%), Positives = 238/270 (88%), Gaps = 1/270 (0%)

Query: 38  VVAPSQ-NQRLRLNPSKDHKPESYDDMQLDFSPSIFSSLERYLPPPMLGLNREEKVKFMR 96
           VV P+Q   RLRLNPS DH PESYDD+QL+FSP +FSSLERYLPP ML L+R+ K++FM+
Sbjct: 22  VVLPTQVTHRLRLNPSTDHNPESYDDLQLEFSPLLFSSLERYLPPSMLNLSRDSKIQFMK 81

Query: 97  EILMKYLPQGERTRVQRHRDYRQKIITNYQPLHRELYNLHIGNFFVPPFVKAIQDNTEES 156
           +IL++Y P+GERTR+Q+HR+YRQKII+NYQPLHRELY ++   FFVP F+KAI +NTEE 
Sbjct: 82  DILVRYSPEGERTRIQKHREYRQKIISNYQPLHRELYTVNAAKFFVPSFLKAINENTEEG 141

Query: 157 FRSIISEPSPGVFTFEMLQPRFCELLLAEVENFEKWVNEAKFRIMRPNTMNKYGAVLDDF 216
           FR+I  EP+PGV+ FEMLQP FCE+L++EVENFE+WV+E KFRIMRPNTMN YGAVLDDF
Sbjct: 142 FRNIWVEPTPGVYVFEMLQPNFCEMLMSEVENFERWVHETKFRIMRPNTMNNYGAVLDDF 201

Query: 217 GLETMLDKLMETYIRPLSKVFFAEVGGSTLDSHHGFVVEYGKDRDVDLGFHVDDSEVTLN 276
           GLETMLDKLM+ YIRP+SK+FF EVGGSTLDSHHGF+VEYG DRDV+LGFHVDDSEVTLN
Sbjct: 202 GLETMLDKLMDEYIRPMSKLFFPEVGGSTLDSHHGFIVEYGVDRDVELGFHVDDSEVTLN 261

Query: 277 VCLGKQFTGGELFFRGTRCEKHVNTGSQTE 306
           VCL KQF GG+LFFRG RC+KHVNT +Q E
Sbjct: 262 VCLSKQFVGGDLFFRGVRCDKHVNTETQAE 291

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449458771|ref|XP_004147120.1| PREDICTED: uncharacterized PKHD-type hydroxylase At1g22950-like [Cucumis sativus] gi|449503401|ref|XP_004161984.1| PREDICTED: uncharacterized PKHD-type hydroxylase At1g22950-like [Cucumis sativus]

 Score =  442 bits (1137), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 202/276 (73%), Positives = 244/276 (88%), Gaps = 4/276 (1%)

Query: 35  ASGVVAPS----QNQRLRLNPSKDHKPESYDDMQLDFSPSIFSSLERYLPPPMLGLNREE 90
            +GVV+P+       RLRL P +DHK ESY+D+QL+FSP +FS LER+LPP ML + RE 
Sbjct: 21  GNGVVSPTPQSLSTHRLRLQPKEDHKSESYEDLQLEFSPVLFSMLERHLPPNMLNVAREV 80

Query: 91  KVKFMREILMKYLPQGERTRVQRHRDYRQKIITNYQPLHRELYNLHIGNFFVPPFVKAIQ 150
           K+++MR+IL++Y P+GER RVQRHR+YRQKII+NYQPLHRELY++H  NFFVP F+KAI 
Sbjct: 81  KLQYMRDILLRYAPEGERNRVQRHREYRQKIISNYQPLHRELYSMHAANFFVPSFLKAIN 140

Query: 151 DNTEESFRSIISEPSPGVFTFEMLQPRFCELLLAEVENFEKWVNEAKFRIMRPNTMNKYG 210
           +N+EESFR I+SEPSPG++ FEMLQP+FCE LL+EVE+FE+WV+E KFRIMRPNTMNKYG
Sbjct: 141 ENSEESFRRIMSEPSPGIYKFEMLQPQFCEKLLSEVESFERWVHETKFRIMRPNTMNKYG 200

Query: 211 AVLDDFGLETMLDKLMETYIRPLSKVFFAEVGGSTLDSHHGFVVEYGKDRDVDLGFHVDD 270
           AVLDDFGLETMLDKLM+ +IRP+S+VFF EVGG+TLDSHHGFVVEYG DRDV+LGFHVDD
Sbjct: 201 AVLDDFGLETMLDKLMDDFIRPISRVFFPEVGGATLDSHHGFVVEYGIDRDVELGFHVDD 260

Query: 271 SEVTLNVCLGKQFTGGELFFRGTRCEKHVNTGSQTE 306
           SEVTLNVCLGKQF+GGELFFRG RC+KHVNT +Q+E
Sbjct: 261 SEVTLNVCLGKQFSGGELFFRGIRCDKHVNTETQSE 296

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297834722|ref|XP_002885243.1| oxidoreductase [Arabidopsis lyrata subsp. lyrata] gi|297331083|gb|EFH61502.1| oxidoreductase [Arabidopsis lyrata subsp. lyrata]

 Score =  441 bits (1135), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 201/290 (69%), Positives = 248/290 (85%), Gaps = 3/290 (1%)

Query: 18  NGVVSGDLSQRQIQSE-PASGVVAPSQNQRLRLNPSKDHKPESYDDMQLDFSPSIFSSLE 76
           NG + G+ S   + +   A+  +A  Q  RLRLNP+ +H+P++Y+D+QLDF  S++SSLE
Sbjct: 20  NGTIGGNNSHSAVAATLRATSTMASCQ--RLRLNPNNEHRPDTYEDLQLDFPNSVYSSLE 77

Query: 77  RYLPPPMLGLNREEKVKFMREILMKYLPQGERTRVQRHRDYRQKIITNYQPLHRELYNLH 136
           +YLPP ML  NR+EK+KFM +I++++LP GER+R QRHRDYRQKII+NYQPLHRELY L 
Sbjct: 78  KYLPPNMLVSNRDEKIKFMTDIMLRHLPHGERSRAQRHRDYRQKIISNYQPLHRELYTLV 137

Query: 137 IGNFFVPPFVKAIQDNTEESFRSIISEPSPGVFTFEMLQPRFCELLLAEVENFEKWVNEA 196
               FVP F+KAI ++TEESFR+IISEPSPGVF F+MLQP FCE++L+E++NFE+WV E 
Sbjct: 138 PTVCFVPSFLKAINESTEESFRNIISEPSPGVFVFDMLQPSFCEMMLSEIDNFERWVGET 197

Query: 197 KFRIMRPNTMNKYGAVLDDFGLETMLDKLMETYIRPLSKVFFAEVGGSTLDSHHGFVVEY 256
           KFRIMRPNTMNKYGAVLDDFGL+TMLDKLME +IRP+SK+FF++VGG++LDSHHGFVVEY
Sbjct: 198 KFRIMRPNTMNKYGAVLDDFGLDTMLDKLMEGFIRPISKLFFSDVGGASLDSHHGFVVEY 257

Query: 257 GKDRDVDLGFHVDDSEVTLNVCLGKQFTGGELFFRGTRCEKHVNTGSQTE 306
           GKDRDVDLGFHVDDSEVTLNVCLG QF GGELFFRGTRCEKHVNT ++ +
Sbjct: 258 GKDRDVDLGFHVDDSEVTLNVCLGNQFVGGELFFRGTRCEKHVNTATKAD 307

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|217075821|gb|ACJ86270.1| unknown [Medicago truncatula]

 Score =  441 bits (1133), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 205/272 (75%), Positives = 240/272 (88%), Gaps = 1/272 (0%)

Query: 35  ASGVVAPSQNQRLRLNPSKDHKPESYDDMQLDFSPSIFSSLERYLPPPMLGLNREEKVKF 94
            +G +A S+  RLRLNP+KDHKPE YDD++LDFSPSIFSSLE++LPP ML  +R++K KF
Sbjct: 13  GNGTMANSR-MRLRLNPNKDHKPEGYDDLELDFSPSIFSSLEKHLPPNMLVFSRDDKAKF 71

Query: 95  MREILMKYLPQGERTRVQRHRDYRQKIITNYQPLHRELYNLHIGNFFVPPFVKAIQDNTE 154
           MREIL+KYLP GER R Q+H++YRQKI ++YQPLH ELY L+   FFVP F+KAI DNTE
Sbjct: 72  MREILLKYLPNGERHRTQKHKEYRQKINSHYQPLHHELYTLNPTAFFVPTFLKAISDNTE 131

Query: 155 ESFRSIISEPSPGVFTFEMLQPRFCELLLAEVENFEKWVNEAKFRIMRPNTMNKYGAVLD 214
           +SFRSIISEPSP ++ F+M QP FCELL AE+ENFEKWV EAKFRIMRPN MNKYGAVLD
Sbjct: 132 QSFRSIISEPSPDIYVFQMFQPEFCELLQAEIENFEKWVAEAKFRIMRPNRMNKYGAVLD 191

Query: 215 DFGLETMLDKLMETYIRPLSKVFFAEVGGSTLDSHHGFVVEYGKDRDVDLGFHVDDSEVT 274
           DFGLE MLDKLM+ ++RPLS+VF+ EVGG+TLDSHHGFVVEYG+D+D+DLGFHVDDSEVT
Sbjct: 192 DFGLEPMLDKLMDDFVRPLSRVFYPEVGGATLDSHHGFVVEYGEDKDLDLGFHVDDSEVT 251

Query: 275 LNVCLGKQFTGGELFFRGTRCEKHVNTGSQTE 306
           LNVCLGK+F+GGELFFRGTRCEKHVNTGSQ E
Sbjct: 252 LNVCLGKEFSGGELFFRGTRCEKHVNTGSQPE 283

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357500135|ref|XP_003620356.1| PKHD-type hydroxylase, putative [Medicago truncatula] gi|355495371|gb|AES76574.1| PKHD-type hydroxylase, putative [Medicago truncatula]

 Score =  441 bits (1133), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 205/272 (75%), Positives = 240/272 (88%), Gaps = 1/272 (0%)

Query: 35  ASGVVAPSQNQRLRLNPSKDHKPESYDDMQLDFSPSIFSSLERYLPPPMLGLNREEKVKF 94
            +G +A S+  RLRLNP+KDHKPE YDD++LDFSPSIFSSLE++LPP ML  +R++K KF
Sbjct: 13  GNGTMANSR-MRLRLNPNKDHKPEGYDDLELDFSPSIFSSLEKHLPPNMLVFSRDDKAKF 71

Query: 95  MREILMKYLPQGERTRVQRHRDYRQKIITNYQPLHRELYNLHIGNFFVPPFVKAIQDNTE 154
           MREIL+KYLP GER R Q+H++YRQKI ++YQPLH ELY L+   FFVP F+KAI DNTE
Sbjct: 72  MREILLKYLPNGERHRTQKHKEYRQKINSHYQPLHHELYTLNPTAFFVPTFLKAISDNTE 131

Query: 155 ESFRSIISEPSPGVFTFEMLQPRFCELLLAEVENFEKWVNEAKFRIMRPNTMNKYGAVLD 214
           +SFRSIISEPSP ++ F+M QP FCELL AE+ENFEKWV EAKFRIMRPN MNKYGAVLD
Sbjct: 132 QSFRSIISEPSPDIYVFQMFQPEFCELLQAEIENFEKWVAEAKFRIMRPNRMNKYGAVLD 191

Query: 215 DFGLETMLDKLMETYIRPLSKVFFAEVGGSTLDSHHGFVVEYGKDRDVDLGFHVDDSEVT 274
           DFGLE MLDKLM+ ++RPLS+VF+ EVGG+TLDSHHGFVVEYG+D+D+DLGFHVDDSEVT
Sbjct: 192 DFGLEPMLDKLMDDFVRPLSRVFYPEVGGATLDSHHGFVVEYGEDKDLDLGFHVDDSEVT 251

Query: 275 LNVCLGKQFTGGELFFRGTRCEKHVNTGSQTE 306
           LNVCLGK+F+GGELFFRGTRCEKHVNTGSQ E
Sbjct: 252 LNVCLGKEFSGGELFFRGTRCEKHVNTGSQPE 283

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	306
TAIR|locus:2092727	394	AT3G18210 [Arabidopsis thalian	0.941	0.730	0.698	3.3e-111
TAIR|locus:2017774	397	AT1G22950 [Arabidopsis thalian	0.928	0.715	0.561	4.6e-89
TAIR|locus:2158327	410	AT5G43660 [Arabidopsis thalian	0.852	0.636	0.528	1.9e-74
TAIR|locus:2008189	291	AT1G48700 [Arabidopsis thalian	0.643	0.676	0.578	1.3e-59
ZFIN|ZDB-GENE-061215-54	345	zgc:158437 "zgc:158437" [Danio	0.656	0.582	0.381	5.4e-31
DICTYBASE|DDB_G0270778	417	DDB_G0270778 "putative prolyl	0.581	0.426	0.322	6.4e-28
UNIPROTKB|F1NPS1	350	F1NPS1 "Uncharacterized protei	0.647	0.565	0.348	1.3e-27
MGI|MGI:1913877	349	Ogfod2 "2-oxoglutarate and iro	0.617	0.541	0.344	1.8e-25
UNIPROTKB|E2QZH8	351	OGFOD2 "Uncharacterized protei	0.640	0.558	0.342	3.6e-25
UNIPROTKB|F1RFJ5	350	OGFOD2 "Uncharacterized protei	0.584	0.511	0.338	5.9e-25

TAIR|locus:2092727 AT3G18210 [Arabidopsis thaliana (taxid:3702)]

 Score = 1098 (391.6 bits), Expect = 3.3e-111, P = 3.3e-111
 Identities = 202/289 (69%), Positives = 242/289 (83%)

Query:    18 NGVVSGDLSQRQIQSEPASGVVAPSQNQRLRLNPSKDHKPESYDDMQLDFSPSIFSSLER 77
             NG ++G  S     +   +     S  QRLRLNP+ +H+P+SY+D+QLDF  S++SSLE+
Sbjct:    20 NGTIAGQNSHSAAPTTLRATSTMVSC-QRLRLNPNNEHRPDSYEDLQLDFPNSVYSSLEK 78

Query:    78 YLPPPMLGLNREEKVKFMREILMKYLPQGERTRVQRHRDYRQKIITNYQPLHRELYNLHI 137
             YLPP ML  NR+EK+KFM +I++++LP GER+R QRH DYR KI TNYQPLH+ELY L  
Sbjct:    79 YLPPNMLVSNRDEKIKFMTDIMLRHLPHGERSRAQRHSDYRLKITTNYQPLHKELYTLVP 138

Query:   138 GNFFVPPFVKAIQDNTEESFRSIISEPSPGVFTFEMLQPRFCELLLAEVENFEKWVNEAK 197
                FVP F+KAI +NTEESFR+IISEPSPGVF F+MLQP FCE++LAE++NFE+WV E K
Sbjct:   139 TVCFVPAFLKAINENTEESFRNIISEPSPGVFVFDMLQPSFCEMMLAEIDNFERWVGETK 198

Query:   198 FRIMRPNTMNKYGAVLDDFGLETMLDKLMETYIRPLSKVFFAEVGGSTLDSHHGFVVEYG 257
             FRIMRPNTMNKYGAVLDDFGL+TMLDKLME +IRP+SKVFF++VGG+TLDSHHGFVVEYG
Sbjct:   199 FRIMRPNTMNKYGAVLDDFGLDTMLDKLMEGFIRPISKVFFSDVGGATLDSHHGFVVEYG 258

Query:   258 KDRDVDLGFHVDDSEVTLNVCLGKQFTGGELFFRGTRCEKHVNTGSQTE 306
             KDRDVDLGFHVDDSEVTLNVCLG QF GGELFFRGTRCEKHVNT ++ +
Sbjct:   259 KDRDVDLGFHVDDSEVTLNVCLGNQFVGGELFFRGTRCEKHVNTATKAD 307

GO:0005506 "iron ion binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0016705 "oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen" evidence=IEA

GO:0031418 "L-ascorbic acid binding" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

TAIR|locus:2017774 AT1G22950 [Arabidopsis thaliana (taxid:3702)]

 Score = 889 (318.0 bits), Expect = 4.6e-89, P = 4.6e-89
 Identities = 160/285 (56%), Positives = 218/285 (76%)

Query:    22 SGDLSQRQIQSEPASGVVAPSQNQRLRLNPSKDHKPESYDDMQLDFSPSIFSSLERYLPP 81
             SG   ++Q Q +P +         +LR  P+++H+PE+Y+D+ LD+SPS+F+SLERYLP 
Sbjct:    15 SGKQPEQQQQQQPRASSGNGEARLKLRRTPNEEHEPENYEDLPLDYSPSLFTSLERYLPE 74

Query:    82 PMLGLNREEKVKFMREILMKYLPQGERTRVQRHRDYRQKIITNYQPLHRELYNLHIGNFF 141
              +L   R +K  FMR++L++Y P  ER RV RH++YR KI+++YQ LH E+Y L   +FF
Sbjct:    75 QLLNSTRIDKASFMRDLLLRYSPDTERVRVLRHKEYRDKIMSSYQRLHGEIYTLDPSSFF 134

Query:   142 VPPFVKAIQDNTEESFRSIISEPSPGVFTFEMLQPRFCELLLAEVENFEKWVNEAKFRIM 201
              P F+ A    +E +FRS + E  PG+FTFEM +P+FCE+LLAEVE+ EKWV +++  IM
Sbjct:   135 APSFLGAFSRKSEPNFRSSMVESYPGIFTFEMFKPQFCEMLLAEVEHMEKWVYDSRSTIM 194

Query:   202 RPNTMNKYGAVLDDFGLETMLDKLMETYIRPLSKVFFAEVGGSTLDSHHGFVVEYGKDRD 261
             RPNTMN +G VLDDFG ++ML KL++ +I P+++V F EV G++LDSHHG++VEYGKDRD
Sbjct:   195 RPNTMNNFGVVLDDFGFDSMLQKLVDDFISPIAQVLFPEVCGTSLDSHHGYIVEYGKDRD 254

Query:   262 VDLGFHVDDSEVTLNVCLGKQFTGGELFFRGTRCEKHVNTGSQTE 306
             VDLGFHVDDSEV+LNVCLGKQF+GGEL+FRG RC+KHVN+ S TE
Sbjct:   255 VDLGFHVDDSEVSLNVCLGKQFSGGELYFRGVRCDKHVNSDS-TE 298

GO:0005506 "iron ion binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0016705 "oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen" evidence=IEA

GO:0016706 "oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors" evidence=IEA

GO:0031418 "L-ascorbic acid binding" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

TAIR|locus:2158327 AT5G43660 [Arabidopsis thaliana (taxid:3702)]

 Score = 751 (269.4 bits), Expect = 1.9e-74, P = 1.9e-74
 Identities = 138/261 (52%), Positives = 188/261 (72%)

Query:    46 RLRLNPSKDHKPESYDDMQLDFSPSIFSSLERYLPPPMLGLNREEKVKFMREILMKYLPQ 105
             RL L P+ +H  ++Y+D++L+FS S+  SLERYLPP +L  NREEK KFM +IL KY+ +
Sbjct:    54 RLSLLPNNEHNSDNYEDLELEFSSSVLRSLERYLPPEILTANREEKAKFMSDILHKYISR 113

Query:   106 GERTRVQRHRDYRQKIITNYQPLHRELYNLHIGNFFVPPFVKAIQDNTEESFRSIISEPS 165
              E  +  R ++YR+ I++NYQP  RELY L   +  +P F KA+++NTEESFR I+ EP 
Sbjct:   114 EECAKAIRFKNYREWIMSNYQPRFRELYKLDPESLLLPCFRKAVRENTEESFRRIMFEPF 173

Query:   166 PGVFTFEMLQPRFCELLLAEVENFEKWVNEAKFRIMRPNTMNKYGAVLDDFGLETMLDKL 225
             PGV+ F+M QP F + LL EVEN  KW++EAK  I +PN  +KYG VLDDFG++ ML  L
Sbjct:   174 PGVYVFKMFQPDFFQKLLVEVENMRKWLHEAKLMIRKPNNKSKYGVVLDDFGMDIMLKPL 233

Query:   226 METYIRPLSKVFFAEVGGSTLDSHHGFVVEYGKDRDVDLGFHVDDSEVTLNVCLGKQFTG 285
             +E +I P+ KVFF +V G+  D+ HGFV+E  +DRD +LGFHV++S++TLNVCL KQ  G
Sbjct:   234 VEDFIFPICKVFFPQVCGTMFDTQHGFVIENCEDRDAELGFHVENSDITLNVCLSKQSEG 293

Query:   286 GELFFRGTRCEKHVNTGSQTE 306
             GE+ F GTRC KH+  G + E
Sbjct:   294 GEILFTGTRCNKHLKAGPKPE 314

GO:0005506 "iron ion binding" evidence=IEA

GO:0005575 "cellular_component" evidence=ND

GO:0016705 "oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen" evidence=IEA

GO:0031418 "L-ascorbic acid binding" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

TAIR|locus:2008189 AT1G48700 [Arabidopsis thaliana (taxid:3702)]

 Score = 611 (220.1 bits), Expect = 1.3e-59, P = 1.3e-59
 Identities = 114/197 (57%), Positives = 142/197 (72%)

Query:   110 RVQRHRDYRQKIITNYQPLHRELYNLHIGNFFVPPFVKAIQDNTEESFRSIISEPSPGVF 169
             + +R + YRQ+II+NYQP  + LY L    F +P F KAI +NTEESFR IISEP PGVF
Sbjct:     3 QAKRRKTYRQEIISNYQPRFKGLYKLDPKLFLLPSFRKAISENTEESFRRIISEPFPGVF 62

Query:   170 TFEMLQPRFCELLLAEVENFEKWVNEAKFRIMRPNTMNKYGAVLDDFGLETMLDKLMETY 229
              F+M QP F E LL EVENF KW NE  F I RP+  +KYG VLDDFGL+ ML +LM+ +
Sbjct:    63 VFKMFQPDFSEKLLLEVENFRKWANETNFTIRRPDNTSKYGVVLDDFGLDIMLKQLMDDF 122

Query:   230 IRPLSKVFFAEVGGSTLDSHHGFVVEYGKDRDVDLGFHVDDSEVTLNVCLGKQFTGGELF 289
             I P+ KVFF EV G+  DSH+GF +E G+DRD D+GFHV+DS++TLNVCL KQ  GGE+ 
Sbjct:   123 IFPICKVFFPEVCGTMFDSHYGFFIENGEDRDADVGFHVEDSDITLNVCLSKQGEGGEIL 182

Query:   290 FRGTRCEKHVNTGSQTE 306
             F G RC KH++   + E
Sbjct:   183 FAGARCNKHMDIDPKPE 199

GO:0005506 "iron ion binding" evidence=IEA

GO:0005575 "cellular_component" evidence=ND

GO:0016705 "oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen" evidence=IEA

GO:0031418 "L-ascorbic acid binding" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

ZFIN|ZDB-GENE-061215-54 zgc:158437 "zgc:158437" [Danio rerio (taxid:7955)]

 Score = 341 (125.1 bits), Expect = 5.4e-31, P = 5.4e-31
 Identities = 84/220 (38%), Positives = 127/220 (57%)

Query:    86 LNREEKVKFMREILMKYLPQGERTRVQRHR---DYRQKIITN-YQPLHRELYNLHIGNFF 141
             L  E + +F R+++ K   Q E  R Q H+     R  +I   Y PLH+ +Y+L   +F 
Sbjct:    43 LGCESESQF-RDVIGKI--QAEIERRQNHKLKSTERAAVIKEIYTPLHQHVYHLQ-ESFL 98

Query:   142 VPPFVKAI------QDNTEESFRSIISEPSPGVFTFEMLQPRFCELLLAEVENFEKWVNE 195
              P  ++ +      + N +   + I +E +  VF F++ +  FC+ LL E+E+FE+  ++
Sbjct:    99 APELLEMVKYCASSEANVQGLLKLIQTEAASRVFRFQVFRKEFCKDLLEELEHFEQ--SD 156

Query:   196 AKFRIMRPNTMNKYGAVLDDFGL-ETMLDKLMETYIRPLSKVFFAEVGGSTLDSHHGFVV 254
             A     RPNTMN YG VL++ G  E  +  L E Y+RPL+ + +++ GG+ LDSH  FVV
Sbjct:   157 APKG--RPNTMNNYGIVLNELGFDEGFITPLREVYLRPLTALLYSDCGGNCLDSHKAFVV 214

Query:   255 EYGKDRDVDLGFHVDDSEVTLNVCLGKQFTGGELFFRGTR 294
             +Y    D++L +H D+SEVTLNV LGK FT G LFF   R
Sbjct:   215 KYDMHEDLNLSYHYDNSEVTLNVSLGKDFTEGNLFFGDMR 254

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0031418 "L-ascorbic acid binding" evidence=IEA

GO:0005506 "iron ion binding" evidence=IEA

GO:0016705 "oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0016706 "oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors" evidence=IEA

GO:0005575 "cellular_component" evidence=ND

GO:0046872 "metal ion binding" evidence=IEA

GO:0016702 "oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen" evidence=IEA

DICTYBASE|DDB_G0270778 DDB_G0270778 "putative prolyl 4-hydroxylase alpha subunit" [Dictyostelium discoideum (taxid:44689)]

 Score = 312 (114.9 bits), Expect = 6.4e-28, P = 6.4e-28
 Identities = 61/189 (32%), Positives = 107/189 (56%)

Query:   110 RVQRHRDYRQKIITN-YQPLHRELYNLHIGNFFVPPFVKAIQD-----NTEESFRSIISE 163
             ++ + R+ R  +I+  Y+  + E++ L    +F   F++ I+      N ++  +++   
Sbjct:   172 KLLKMREARINMISKLYKRKYPEIFELR-EEYFDKDFIEPIKQYKKTKNQDDLLKALTKL 230

Query:   164 PSPGVFTFEMLQPRFCELLLAEVENFEKWVNEAKFRIMRPNTMNKYGAVLDDFGLETMLD 223
                 +++F +    FC  LL E+ENF+           RPN+MN YGAVLD+ G      
Sbjct:   231 TETRIYSFRIFTMEFCTKLLEEIENFKN----TGLPTARPNSMNNYGAVLDEMGFTEFFK 286

Query:   224 KLMETYIRPLSKVFFAEVGGSTLDSHHGFVVEYGKDRDVDLGFHVDDSEVTLNVCLGKQF 283
             +L E Y+   + + + +  G  L+SHH F V+Y  D++ +LGFH D+S++T+N+CLG +F
Sbjct:   287 QLREDYLSLFTSILYKDYNGEKLNSHHAFAVQYKMDKEKELGFHYDESDITVNLCLGSEF 346

Query:   284 TGGELFFRG 292
             TGG L+F+G
Sbjct:   347 TGGSLYFKG 355

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0031418 "L-ascorbic acid binding" evidence=IEA

GO:0016706 "oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors" evidence=IEA

GO:0016705 "oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0005506 "iron ion binding" evidence=IEA

GO:0005575 "cellular_component" evidence=ND

UNIPROTKB|F1NPS1 F1NPS1 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 309 (113.8 bits), Expect = 1.3e-27, P = 1.3e-27
 Identities = 75/215 (34%), Positives = 116/215 (53%)

Query:    85 GLNREEKVKFMREILMKYLPQGERTRVQRHRDYRQKIITN--YQPLHRELYNLHIGNFFV 142
             G   EE+   M  +L +   + ER +   H+   +K I +  Y+  H E+Y L   +F  
Sbjct:    48 GCGSEEQ---MAAVLREIEAEVERRKHLVHQSAERKAIISQCYKRKHSEVYTLQ-DSFLA 103

Query:   143 PPFVKAIQ-----D-NTEESFRSIISEPSPGVFTFEMLQPRFCELLLAEVENFEKWVNEA 196
             P F++ ++     D N     R   S     +F   +    FC+  + E+ENFE    ++
Sbjct:   104 PGFLEIVRYCTSPDANLHGLLRYTESFSDKRIFRLPVFTEEFCQAFIEELENFE----QS 159

Query:   197 KFRIMRPNTMNKYGAVLDDFGL-ETMLDKLMETYIRPLSKVFFAEVGGSTLDSHHGFVVE 255
                  RPN+MN YG +L++ G+ E+ +  L E Y+RP++ + + +VGG+ LDSH  FVV+
Sbjct:   160 DMPKGRPNSMNNYGVLLNELGMDESFITPLREKYLRPITALLYPDVGGACLDSHKAFVVK 219

Query:   256 YGKDRDVDLGFHVDDSEVTLNVCLGKQFTGGELFF 290
             Y    D+DL  H D++EVTLNV LGK FT G L+F
Sbjct:   220 YSLHEDLDLSSHYDNAEVTLNVSLGKDFTEGNLYF 254

GO:0005506 "iron ion binding" evidence=IEA

GO:0016706 "oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors" evidence=IEA

GO:0031418 "L-ascorbic acid binding" evidence=IEA

MGI|MGI:1913877 Ogfod2 "2-oxoglutarate and iron-dependent oxygenase domain containing 2" [Mus musculus (taxid:10090)]

 Score = 289 (106.8 bits), Expect = 1.8e-25, P = 1.8e-25
 Identities = 71/206 (34%), Positives = 115/206 (55%)

Query:    99 LMKYLPQ--GERTRVQRHRDYRQKII-TNYQPLHRELYNLHIGNFFVPPFVKAIQDNT-- 153
             L++ L Q  G R R+ +    R+ +I ++Y P   E+Y+        P F+ A + +T  
Sbjct:    59 LLEELEQEVGRRRRLGQESAVRKALIASSYHPARPEVYSSLQDAALAPEFMAAAEYSTSP 118

Query:   154 ----EESFRSI--ISEPSPGVFTFEMLQPRFCELLLAEVENFEKWVNEAKFRIMRPNTMN 207
                 E   + +  +SE    ++   +   +FC+ LL E+E+FE    ++     RPNTMN
Sbjct:   119 GADLEGLLQRLETVSEEKR-IYRVPVFSAKFCQTLLEELEHFE----QSDMPKGRPNTMN 173

Query:   208 KYGAVLDDFGLET-MLDKLMETYIRPLSKVFFAEVGGSTLDSHHGFVVEYGKDRDVDLGF 266
              +G ++ + GL+  ++  L E ++ PL  + + + GG  LDSH  FVV+Y   +D+DLG 
Sbjct:   174 NHGVLMYELGLDDPLVTPLRERFLLPLMALLYPDYGGGYLDSHRAFVVKYALGQDLDLGC 233

Query:   267 HVDDSEVTLNVCLGKQFTGGELFFRG 292
             H D++E+TLNV LGK FTGG L+F G
Sbjct:   234 HYDNAELTLNVALGKDFTGGALYFGG 259

GO:0003674 "molecular_function" evidence=ND

GO:0005506 "iron ion binding" evidence=IEA

GO:0005575 "cellular_component" evidence=ND

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0016702 "oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen" evidence=IEA

GO:0016705 "oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen" evidence=IEA

GO:0016706 "oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors" evidence=IEA

GO:0031418 "L-ascorbic acid binding" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

UNIPROTKB|E2QZH8 OGFOD2 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 286 (105.7 bits), Expect = 3.6e-25, P = 3.6e-25
 Identities = 72/210 (34%), Positives = 112/210 (53%)

Query:    93 KFMREILMKYLPQGERT-RVQRHRDYRQKIITN-YQPLHRELYNLHIGNFFVPPFVKAIQ 150
             K  +E+L +   + ER  R+ +    R+ +I++ Y P   +LYN        P F+ A +
Sbjct:    55 KDFQELLGELEQEVERRQRLGQESAARKALISSSYHPARPDLYNTLQDEALAPEFLAAAE 114

Query:   151 DNTEES--FRSIIS--EPSPG---VFTFEMLQPRFCELLLAEVENFEKWVNEAKFRIMRP 203
              +         ++   E   G   ++   +    FC  LL E+E+FE    ++     RP
Sbjct:   115 YSASPGADLEGLLQRLEMVSGEKRIYRLPVFTAPFCRALLEELEHFE----QSDMPKGRP 170

Query:   204 NTMNKYGAVLDDFGL-ETMLDKLMETYIRPLSKVFFAEVGGSTLDSHHGFVVEYGKDRDV 262
             NTMN YG +L + GL E ++  L E +++PL  + + + GG  LDSH  FVV+Y   +D 
Sbjct:   171 NTMNNYGVLLHELGLDEPLVTPLRERFLQPLMALLYPDCGGGWLDSHRAFVVKYALGQDR 230

Query:   263 DLGFHVDDSEVTLNVCLGKQFTGGELFFRG 292
             +LG H D++E+TLNV LGK FTGG L+F G
Sbjct:   231 ELGCHYDNAELTLNVALGKTFTGGALYFGG 260

GO:0005506 "iron ion binding" evidence=IEA

GO:0031418 "L-ascorbic acid binding" evidence=IEA

GO:0016706 "oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors" evidence=IEA

UNIPROTKB|F1RFJ5 OGFOD2 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 284 (105.0 bits), Expect = 5.9e-25, P = 5.9e-25
 Identities = 65/192 (33%), Positives = 106/192 (55%)

Query:   108 RTRVQRHRDYRQKII-TNYQPLHRELYNLHIGNFFVPPFVKAIQDNTEES--FRSIISE- 163
             R R+ +    R+ +I ++Y P+  ++Y+L       P F+ A + +T      + ++   
Sbjct:    71 RQRLGQESAARKALIASSYHPVRPDIYSLLQDEALAPEFLAAAEYSTSPGADLKGLLQRL 130

Query:   164 ----PSPGVFTFEMLQPRFCELLLAEVENFEKWVNEAKFRIMRPNTMNKYGAVLDDFGL- 218
                     ++   +    FC+ LL E+E+FE    ++     RPNTMN YG +L + GL 
Sbjct:   131 ETVSEEKRIYRLPVFTAPFCQALLQELEHFE----QSDLPKGRPNTMNNYGVLLYELGLD 186

Query:   219 ETMLDKLMETYIRPLSKVFFAEVGGSTLDSHHGFVVEYGKDRDVDLGFHVDDSEVTLNVC 278
             E ++  L E +++PL  + + + GG  LDSH  FVV+Y   +D +LG H D++E+TLNV 
Sbjct:   187 EPLVTPLRERFLQPLMALLYPDCGGGWLDSHRAFVVKYAPGQDRELGCHYDNAELTLNVS 246

Query:   279 LGKQFTGGELFF 290
             LGK FTGG L+F
Sbjct:   247 LGKAFTGGALYF 258

GO:0031418 "L-ascorbic acid binding" evidence=IEA

GO:0016706 "oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors" evidence=IEA

GO:0005506 "iron ion binding" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	1.14.11	LOW CONFIDENCE prediction!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: gw1.XV.847.1 hypothetical protein (342 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	306
smart00702	165	smart00702, P4Hc, Prolyl 4-hydroxylase alpha subun	4e-17

>gnl|CDD|214780 smart00702, P4Hc, Prolyl 4-hydroxylase alpha subunit homologues

 Score = 77.0 bits (190), Expect = 4e-17
 Identities = 37/128 (28%), Positives = 45/128 (35%), Gaps = 13/128 (10%)

Query: 175 QPRFCELLLAEVENFEKWVNEAKFRIMRPNTMNKYGAVLDDFGLETMLDK--LMETYIRP 232
            P  C+ LL E E    W  E    I  PN  ++Y       G    L +  L+   IR 
Sbjct: 1   SPAECQKLLEEAEPLG-WRGEVTRGIGNPNETSQY---RQSNGTWLELLERDLVIERIRQ 56

Query: 233 LSKVFFAEVGGSTLDSHHGFVVEYGKDRDVDLGFHVD-----DSEVTLNVCLGKQFTGGE 287
               F   + G  L +    V  YG       G HVD     D   T  + L     GGE
Sbjct: 57  RLADFLGLLAGLPLSAEDAQVARYGPG--GHYGPHVDNFLYGDRIATFILYLNDVEEGGE 114

Query: 288 LFFRGTRC 295
           L F G R 
Sbjct: 115 LVFPGLRL 122

Mammalian enzymes catalyse hydroxylation of collagen, for example. Prokaryotic enzymes might catalyse hydroxylation of antibiotic peptides. These are 2-oxoglutarate-dependent dioxygenases, requiring 2-oxoglutarate and dioxygen as cosubstrates and ferrous iron as a cofactor. Length = 165

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	306
KOG1971	415	consensus Lysyl hydroxylase [Posttranslational mod	100.0
KOG1971	415	consensus Lysyl hydroxylase [Posttranslational mod	99.59
smart00702	178	P4Hc Prolyl 4-hydroxylase alpha subunit homologues	98.79
PRK05467	226	Fe(II)-dependent oxygenase superfamily protein; Pr	97.98
PF03171	98	2OG-FeII_Oxy: 2OG-Fe(II) oxygenase superfamily Ent	95.06
PLN00052	310	prolyl 4-hydroxylase; Provisional	92.58
PF13661	70	2OG-FeII_Oxy_4: 2OG-Fe(II) oxygenase superfamily	90.76
PHA02813	354	hypothetical protein; Provisional	87.54
PHA02869	418	C4L/C10L-like gene family protein; Provisional	85.17
PF13640	100	2OG-FeII_Oxy_3: 2OG-Fe(II) oxygenase superfamily;	84.26

>KOG1971 consensus Lysyl hydroxylase [Posttranslational modification, protein turnover, chaperones]

Probab=100.00  E-value=6.8e-50  Score=389.53  Aligned_cols=259  Identities=38%  Similarity=0.530  Sum_probs=254.4

Q ss_pred             cccccccCCCCCCCCCCCCCccccCChhHHHHhhhcCCCccCCCCHHHHHHHHHHHHHHhCCccchhhhhccHHhhhhHh
Q 021863           43 QNQRLRLNPSKDHKPESYDDMQLDFSPSIFSSLERYLPPPMLGLNREEKVKFMREILMKYLPQGERTRVQRHRDYRQKII  122 (306)
Q Consensus        43 ~~~rl~~~p~~~h~~~~y~d~~l~~~~~~~~~le~~lp~~~~~~~r~~k~~fm~~iL~~~~~~~eR~r~~~~~e~~~~I~  122 (306)
                      .+.++.+.|+.+|.+++|+|++|+|+++..++||.|+|+.+|++.|+.|+|||.++|.+|++..++.++..+..|+.+|.
T Consensus        30 ni~ld~~~~~fq~l~g~~~dv~Lkf~~~~~~~ln~~~pt~~l~~~~n~~~K~~~d~l~nY~~r~~~~~~l~~~~~r~~~~  109 (415)
T KOG1971|consen   30 NITLDHRSRIFQNLNGAYEDVVLKFSSGQVRALNVAYPTLPLTVHGNGPAKFMLDYLGNYIPREWTGCSLCCKNYRELIK  109 (415)
T ss_pred             cccccCcCcccccCcCCcCCeeEecccCchhhhhhcCCCcceeeccCccHHHHHHHHhhhcchhhhhhhccccccchhhh
Confidence            55799999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hcCCCCCccccccCcccCCCchhHHHhhhccHhhhhccccccCCceeEeecCCHHHHHHHHHHHHHhhhhhhcccCCCCC
Q 021863          123 TNYQPLHRELYNLHIGNFFVPPFVKAIQDNTEESFRSIISEPSPGVFTFEMLQPRFCELLLAEVENFEKWVNEAKFRIMR  202 (306)
Q Consensus       123 ~~Y~pLhpdLy~lnpe~yl~P~f~~ai~~~tee~~~~ii~EpcPdVY~FP~Ft~~FC~~LIeE~E~F~~Ws~gs~~pi~R  202 (306)
                      ++||+|+-..|.++|+.++.|+|..+...++++.|+++++|+.|++|.||||++.||+++++|||+|++|+.+++.+|+|
T Consensus       110 s~~q~l~~~~Y~~dp~~l~i~n~~~~~~~~~~~~~~~~~~e~~p~~~v~~~~~~~~~ea~~~evE~~r~~~~dad~~i~~  189 (415)
T KOG1971|consen  110 SNLQRLLELDYPLDPENLFIPNFEVAHSANIKEFFRRHGSEYSPGKFVFPMFQPDFSEARLMEVEHFRKFSVDADFVITR  189 (415)
T ss_pred             hccccchhccCCCCHHHhccccccccchhccHHHHHHhccccCCeeEEeeccCccHHHHHHHHHHHhhhcccccceeccC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCCcccccccc--ChHHHHHHHHHHHhchhhh---------------------hhccccCCCCCcccceEEEEEecC
Q 021863          203 PNTMNKYGAVLDDF--GLETMLDKLMETYIRPLSK---------------------VFFAEVGGSTLDSHHGFVVEYGKD  259 (306)
Q Consensus       203 PntMN~YG~VL~ei--G~e~~~~~ll~~yi~Pl~~---------------------~Lfp~~~g~~Ldsh~~FVVrY~p~  259 (306)
                      ||+|++||++++++  ||..+..+|.++|+.||++                     .+||.++|..||+|++|+|+|..+
T Consensus       190 P~~~~~li~~~k~~ia~l~~~~~kL~enF~~al~~~~yyars~dy~~~v~g~~vg~~~~P~v~~~yl~~~~~f~~e~~~~  269 (415)
T KOG1971|consen  190 PNTLRNLIVLNKEFIAPLVSRHGKLWENFWGALSADGYYARSEDYVDIVQGNRVGVWNVPYVCGAYLDSHDAFRVESSED  269 (415)
T ss_pred             ChhHHHHHHHhhhccchhhhhhHHHHHHhhhhhccccchhhhhhhhhhhcccceeEEeecccceeEEecccceeeeccCc
Confidence            99999999999999  9999999999999999999                     999999999999999999999665


Q ss_pred             -CCCCCCccccCCceeeeeecCCCccCCceeeeeccccccccC
Q 021863          260 -RDVDLGFHVDDSEVTLNVCLGKQFTGGELFFRGTRCEKHVNT  301 (306)
Q Consensus       260 -~d~~L~~H~DdSevTLNV~LgkdFeGGgl~F~g~~C~~hv~~  301 (306)
                       .|+++++|+|++++|+|+||+++|+||.++|.+.+|++|+++
T Consensus       270 ~~Dpdm~~~~~~~e~~l~v~l~nq~~gG~L~~~~~~~~~h~~~  312 (415)
T KOG1971|consen  270 NRDPDMGFCVDAREVGLFVCLSNQFEGGELLFTGKYCTKHLRT  312 (415)
T ss_pred             CCCCccccccchhhcceeEEecccccCCeeEeeccccccccCC
Confidence             999999999999999999999999999999999999999998

>KOG1971 consensus Lysyl hydroxylase [Posttranslational modification, protein turnover, chaperones]

Probab=99.59  E-value=5.4e-16  Score=152.57  Aligned_cols=110  Identities=22%  Similarity=0.483  Sum_probs=98.0

Q ss_pred             hhccHHhhhhHhh-cCC--CCCc-ccccc--Cc----ccCCCchhHHHhhhccHhhhhccccccCCceeEeecCCHHHHH
Q 021863          111 VQRHRDYRQKIIT-NYQ--PLHR-ELYNL--HI----GNFFVPPFVKAIQDNTEESFRSIISEPSPGVFTFEMLQPRFCE  180 (306)
Q Consensus       111 ~~~~~e~~~~I~~-~Y~--pLhp-dLy~l--np----e~yl~P~f~~ai~~~tee~~~~ii~EpcPdVY~FP~Ft~~FC~  180 (306)
                      +.|++++|+++.. .|+  ++++ ++|+|  |+    ++|||++|.++.+.+      .++.++||+|||||++  ++|+
T Consensus       290 l~nq~~gG~L~~~~~~~~~h~~~~~~~EiFdn~h~p~qa~LHrg~~~~~a~~------~~~~~~~~nv~~~~~~--~~c~  361 (415)
T KOG1971|consen  290 LSNQFEGGELLFTGKYCTKHLRTDDLWEIFDNSHDPGQAYLHRGYHKHGARA------TIVGQPCPNVYWFPIS--SLCD  361 (415)
T ss_pred             ecccccCCeeEeeccccccccCCCchhhhccCcCCCccceecCcchhccccc------cCCCCCCCceeeehhH--HHHH
Confidence            7899999999988 887  7777 99998  43    999999999999986      4889999999999999  9999


Q ss_pred             HHHHHHHHhhhhhhcccCCCCCCCCCCCcccc------ccccChHHHHHHHHHHHhc
Q 021863          181 LLLAEVENFEKWVNEAKFRIMRPNTMNKYGAV------LDDFGLETMLDKLMETYIR  231 (306)
Q Consensus       181 ~LIeE~E~F~~Ws~gs~~pi~RPntMN~YG~V------L~eiG~e~~~~~ll~~yi~  231 (306)
                      +|++||++|++|++|.+.++   +..++|++|      |+++|++..|..++..||+
T Consensus       362 el~~~me~f~~Ws~g~~~D~---r~~~gye~~~trdi~m~q~~~e~~~~~~~~~~~~  415 (415)
T KOG1971|consen  362 ELVEEMEEFGRWSGGCAEDK---RLAGGYENVPTRDIHMRQVGFERLWLKFLRTYVR  415 (415)
T ss_pred             HHHHHHHHhhcccccchhhh---hhcCCcccCCchhhHHHhhhhHHHHHHHHHHhhC
Confidence            99999999999999999874   356677776      7889999999999999985

>smart00702 P4Hc Prolyl 4-hydroxylase alpha subunit homologues

Probab=98.79  E-value=2.9e-08  Score=85.46  Aligned_cols=122  Identities=30%  Similarity=0.428  Sum_probs=74.9

Q ss_pred             CceeEee-cCCHHHHHHHHHHHHHhhhhhhcccCCCCCCCCC----CCccccccccChHHHHHHHHHHHhchhhhhhccc
Q 021863          166 PGVFTFE-MLQPRFCELLLAEVENFEKWVNEAKFRIMRPNTM----NKYGAVLDDFGLETMLDKLMETYIRPLSKVFFAE  240 (306)
Q Consensus       166 PdVY~FP-~Ft~~FC~~LIeE~E~F~~Ws~gs~~pi~RPntM----N~YG~VL~eiG~e~~~~~ll~~yi~Pl~~~Lfp~  240 (306)
                      |+||.++ +||+++|++|+++.+..+ |........+.++..    +.....++.-.-+.     +.++|....+.+++.
T Consensus         1 P~i~~~~~~ls~~ec~~li~~~~~~~-~~~~~~~~~~~~~~~~~~R~~~~~~l~~~~~~~-----~~~~l~~~i~~~~~~   74 (178)
T smart00702        1 PGVVVFHDFLSPAECQKLLEEAEPLG-WRGEVTRGDTNPNHDSKYRQSNGTWLELLKGDL-----VIERIRQRLADFLGL   74 (178)
T ss_pred             CcEEEECCCCCHHHHHHHHHHhhhhc-ccceeecCCCCccccCCCEeecceecCCCCCCH-----HHHHHHHHHHHHHCC
Confidence            7899997 999999999999999876 332222111111100    01122232211011     112222222233322


Q ss_pred             cCCCCCcccceEEEEEecCCCCCCCccccCC--------ceeeeeecCCCccCCceeeeeccc
Q 021863          241 VGGSTLDSHHGFVVEYGKDRDVDLGFHVDDS--------EVTLNVCLGKQFTGGELFFRGTRC  295 (306)
Q Consensus       241 ~~g~~Ldsh~~FVVrY~p~~d~~L~~H~DdS--------evTLNV~LgkdFeGGgl~F~g~~C  295 (306)
                      ..+.........+++|.++  ..+.+|+|.+        .+|+.|-|+++++||++.|.+..+
T Consensus        75 ~~~~~~~~~~~~~~~Y~~g--~~~~~H~D~~~~~~~~~r~~T~~~yLn~~~~GG~~~f~~~~~  135 (178)
T smart00702       75 LRGLPLSAEDAQVARYGPG--GHYGPHVDNFEDDENGDRIATFLLYLNDVEEGGELVFPGLGL  135 (178)
T ss_pred             CchhhccCcceEEEEECCC--CcccCcCCCCCCCCCCCeEEEEEEEeccCCcCceEEecCCCC
Confidence            1111224567899999885  6899999955        799999999999999999998876

Mammalian enzymes catalyse hydroxylation of collagen, for example. Prokaryotic enzymes might catalyse hydroxylation of antibiotic peptides. These are 2-oxoglutarate-dependent dioxygenases, requiring 2-oxoglutarate and dioxygen as cosubstrates and ferrous iron as a cofactor.

>PRK05467 Fe(II)-dependent oxygenase superfamily protein; Provisional

Probab=97.98  E-value=5.3e-05  Score=70.29  Aligned_cols=114  Identities=22%  Similarity=0.359  Sum_probs=68.9

Q ss_pred             ecCCHHHHHHHHHHHHHhhhhhhcccCCC-CCCCCCCCccccccccChHHHHHHHHHHHhc--hhhhhhccccCCCCCcc
Q 021863          172 EMLQPRFCELLLAEVENFEKWVNEAKFRI-MRPNTMNKYGAVLDDFGLETMLDKLMETYIR--PLSKVFFAEVGGSTLDS  248 (306)
Q Consensus       172 P~Ft~~FC~~LIeE~E~F~~Ws~gs~~pi-~RPntMN~YG~VL~eiG~e~~~~~ll~~yi~--Pl~~~Lfp~~~g~~Lds  248 (306)
                      .+||++.|+.+++.+|.- .|..|...-- ..+.--||--+..+.- +...+...+..++.  |+    |-.. +-+..-
T Consensus         7 ~vLs~eec~~~~~~le~~-~~~dg~~taG~~~~~vKnN~ql~~d~~-~a~~l~~~i~~~L~~~~l----~~sa-~lp~~i   79 (226)
T PRK05467          7 DVLSPEEVAQIRELLDAA-EWVDGRVTAGAQAAQVKNNQQLPEDSP-LARELGNLILDALTRNPL----FFSA-ALPRKI   79 (226)
T ss_pred             ccCCHHHHHHHHHHHHhc-CCccCCcCcCccchhcccccccCCCCH-HHHHHHHHHHHHHhcCch----hhhh-cccccc
Confidence            479999999999999984 5765443210 0011233323333333 43444444555553  43    2111 111122


Q ss_pred             cceEEEEEecCCCCCCCccccCC-------------ceeeeeecC--CCccCCceeeeecc
Q 021863          249 HHGFVVEYGKDRDVDLGFHVDDS-------------EVTLNVCLG--KQFTGGELFFRGTR  294 (306)
Q Consensus       249 h~~FVVrY~p~~d~~L~~H~DdS-------------evTLNV~Lg--kdFeGGgl~F~g~~  294 (306)
                      +.-.+.+|.++  -..++|+|++             .+|+.|-|+  ++|+||+|.|....
T Consensus        80 ~~~~f~rY~~G--~~y~~H~D~~~~~~~~~~~~~rs~lS~~lyLnd~~~yeGGEl~~~~~~  138 (226)
T PRK05467         80 HPPLFNRYEGG--MSYGFHVDNAVRSLPGTGGRVRTDLSATLFLSDPDDYDGGELVIEDTY  138 (226)
T ss_pred             ccceEEEECCC--CccCccccCCcccCCCCCcceeEEEEEEEEeCCCCCCcCCceEEecCC
Confidence            34457899877  6889999975             678999998  47999999998643

>PF03171 2OG-FeII_Oxy: 2OG-Fe(II) oxygenase superfamily Entry for Lysyl hydrolases This Prosite entry is a sub-family of the Pfam entry; InterPro: IPR005123 This domain is found in members of the 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily [], as well as the C-terminal of prolyl 4-hydroxylase alpha subunit

Probab=95.06  E-value=0.021  Score=44.45  Aligned_cols=47  Identities=23%  Similarity=0.172  Sum_probs=36.5

Q ss_pred             cceEEEEEe-cCCCCCCCccccC--CceeeeeecCCCccCCceeeeeccccccc
Q 021863          249 HHGFVVEYG-KDRDVDLGFHVDD--SEVTLNVCLGKQFTGGELFFRGTRCEKHV  299 (306)
Q Consensus       249 h~~FVVrY~-p~~d~~L~~H~Dd--SevTLNV~LgkdFeGGgl~F~g~~C~~hv  299 (306)
                      ++..+.+|. +++...+++|+|.  +.+||++.    .++|||+|....+...|
T Consensus         2 ~~~~~~~Y~~~~~~~~~~~H~D~~~~~~Til~~----~~~~gL~~~~~~~~~~v   51 (98)
T PF03171_consen    2 SQLRLNRYPPPENGVGIGPHTDDEDGLLTILFQ----DEVGGLQVRDDGEWVDV   51 (98)
T ss_dssp             -EEEEEEE-SCCGCEEEEEEEES--SSEEEEEE----TSTS-EEEEETTEEEE-
T ss_pred             CEEEEEECCCcccCCceeCCCcCCCCeEEEEec----ccchheeccccccccCc
Confidence            456789999 7789999999999  99999998    78999999987544433

The holoenzyme has the activity (1.14.11.2 from EC) catalysing the reaction: Procollagen L-proline + 2-oxoglutarate + O2 = procollagen trans-4-hydroxy-L-proline + succinate + CO2. The full enzyme consists of a alpha2 beta2 complex with the alpha subunit contributing most of the parts of the active site []. The family also includes lysyl hydrolases, isopenicillin synthases and AlkB. ; GO: 0016491 oxidoreductase activity, 0016706 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors, 0055114 oxidation-reduction process; PDB: 3ON7_D 1BK0_A 1IPS_B 1QIQ_A 1OC1_A 2Y86_A 2Y60_A 1W03_A 2VE1_A 1QJF_A ....

>PLN00052 prolyl 4-hydroxylase; Provisional

Probab=92.58  E-value=0.76  Score=44.80  Aligned_cols=117  Identities=19%  Similarity=0.355  Sum_probs=65.0

Q ss_pred             CCceeEee-cCCHHHHHHHHHHHHH-hhhhhh---cccCCCCCCCCCCCccccccccChHHHHHHHHHHHhchhhhhhcc
Q 021863          165 SPGVFTFE-MLQPRFCELLLAEVEN-FEKWVN---EAKFRIMRPNTMNKYGAVLDDFGLETMLDKLMETYIRPLSKVFFA  239 (306)
Q Consensus       165 cPdVY~FP-~Ft~~FC~~LIeE~E~-F~~Ws~---gs~~pi~RPntMN~YG~VL~eiG~e~~~~~ll~~yi~Pl~~~Lfp  239 (306)
                      -|.||.++ +||++.|+.||+-.+. +..+.-   +++.... ...-..+++.|+.-. +.....+ ++.|+-++  ..|
T Consensus        53 ~P~i~~~~nfLs~~Ecd~Li~la~~~l~~S~v~~~~~g~~~~-s~~RTS~~~~l~~~~-dpvv~~I-~~Ria~~t--~lp  127 (310)
T PLN00052         53 QPRIFVYKGFLSDAECDHLVKLAKKKIQRSMVADNKSGKSVM-SEVRTSSGMFLDKRQ-DPVVSRI-EERIAAWT--FLP  127 (310)
T ss_pred             CCCEEEECCcCCHHHHHHHHHhcccccccceeecCCCCcccc-CCCEEecceeecCCC-CHHHHHH-HHHHHHHh--CCC
Confidence            58999886 8999999999988765 222110   0000000 000112344443321 2222222 22222222  122


Q ss_pred             ccCCCCCcccceEEEEEecCCCCCCCcccc------------CCceeeeeecCCCccCCceeeeec
Q 021863          240 EVGGSTLDSHHGFVVEYGKDRDVDLGFHVD------------DSEVTLNVCLGKQFTGGELFFRGT  293 (306)
Q Consensus       240 ~~~g~~Ldsh~~FVVrY~p~~d~~L~~H~D------------dSevTLNV~LgkdFeGGgl~F~g~  293 (306)
                      -..+     -..-|++|.+++  ...+|+|            +.-.|+=|=|+...+||++.|-..
T Consensus       128 ~~~~-----E~lQVlrY~~Gq--~Y~~H~D~~~~~~~~~~gg~R~aTvL~YLndv~~GGeT~FP~~  186 (310)
T PLN00052        128 EENA-----ENIQILRYEHGQ--KYEPHFDYFHDKINQALGGHRYATVLMYLSTVDKGGETVFPNA  186 (310)
T ss_pred             cccC-----cceEEEecCCCC--CCCCCCCccccccccccCCceeEEEEEEeccCCCCCceecCCc
Confidence            1111     134699999885  4677877            235777788899899999999875

>PF13661 2OG-FeII_Oxy_4: 2OG-Fe(II) oxygenase superfamily

Probab=90.76  E-value=0.33  Score=36.72  Aligned_cols=42  Identities=38%  Similarity=0.593  Sum_probs=33.5

Q ss_pred             EEEEecCCCCCCCccccCCc--------eeeeeecC----CCccCCceeeeecc
Q 021863          253 VVEYGKDRDVDLGFHVDDSE--------VTLNVCLG----KQFTGGELFFRGTR  294 (306)
Q Consensus       253 VVrY~p~~d~~L~~H~DdSe--------vTLNV~Lg----kdFeGGgl~F~g~~  294 (306)
                      +-.|+......+.+|+|+..        +|+-|-|+    .+|.||.+.|....
T Consensus        13 ~~~~~~~~g~~~~~H~D~~~~~~~~~r~~t~llYLn~~w~~d~~Gg~~~f~~~~   66 (70)
T PF13661_consen   13 FRFYRYRRGDFFGWHVDADPSSSGKRRFLTLLLYLNEDWDEDFGGGELFFDDDG   66 (70)
T ss_pred             eeEEEcCCCCEeeeeEcCCccccccceeEEEEEEecccccCccCCcEEEEeCCC
Confidence            33466677889999999655        78889998    78999999997654

>PHA02813 hypothetical protein; Provisional

Probab=87.54  E-value=3.7  Score=41.08  Aligned_cols=120  Identities=11%  Similarity=0.176  Sum_probs=63.2

Q ss_pred             CceeEeecCCHHHHHHH----HHHHHHh-hhhhhcccCCC------CCCCCCCCccccccccChHHHHHHHHHHHhchhh
Q 021863          166 PGVFTFEMLQPRFCELL----LAEVENF-EKWVNEAKFRI------MRPNTMNKYGAVLDDFGLETMLDKLMETYIRPLS  234 (306)
Q Consensus       166 PdVY~FP~Ft~~FC~~L----IeE~E~F-~~Ws~gs~~pi------~RPntMN~YG~VL~eiG~e~~~~~ll~~yi~Pl~  234 (306)
                      .|+-+.-+|+...-..+    +.+++-- -.|+.+.-++-      ..++.-|+=-+++++.  +..|..+..       
T Consensus         5 ~~~l~~~~F~~~~f~~~k~~l~~~i~~~d~~~~~s~i~~~~~~ge~l~~~iRnNkrviid~~--~~L~erIr~-------   75 (354)
T PHA02813          5 DGIIKVKTFNDDYFNNVKKIIMDMIKYKDIIWEESKVFDHEKGGEVINTNERQCKQYIIRGL--DDIFKVIRK-------   75 (354)
T ss_pred             CCceEEEEecHHHHHHHHHHHHHHHhccccCccccceeccccCceEEccccccceEEEEcCH--HHHHHHHHH-------
Confidence            36677788888844444    4444400 13655333320      0111111112334444  555555433       


Q ss_pred             hhhccccCCC------CCcccceEEEEEecCC--CCCCCccc----cCCceeeeeecCCCccCCceeeeecccc
Q 021863          235 KVFFAEVGGS------TLDSHHGFVVEYGKDR--DVDLGFHV----DDSEVTLNVCLGKQFTGGELFFRGTRCE  296 (306)
Q Consensus       235 ~~Lfp~~~g~------~Ldsh~~FVVrY~p~~--d~~L~~H~----DdSevTLNV~LgkdFeGGgl~F~g~~C~  296 (306)
                       .|+.+..|.      .+..+..| ++|.++.  +.+-.+++    +.|.+||=+=|++.++||++.|.--.++
T Consensus        76 -~Lp~~l~~~~lv~~V~vnerirf-yrY~kGq~F~~H~Dg~~~r~k~~s~~tLLLYLN~~~~GGeT~f~~~~~t  147 (354)
T PHA02813         76 -KLLLSFEFPQKISDIILDNTITL-IKYEKGDFFNNHRDFIHFKSKNCYCYHLVLYLNNTSKGGNTNIHIKDNT  147 (354)
T ss_pred             -hhHHHhcCCccceeEEEcceEEE-EEECCCcccCcccCCceeecCCceEEEEEEEEeccCCCCceEEEcCCCc
Confidence             233333232      23445444 5788776  33333332    3477889999999999999999865444

>PHA02869 C4L/C10L-like gene family protein; Provisional

Probab=85.17  E-value=5.4  Score=40.70  Aligned_cols=119  Identities=17%  Similarity=0.106  Sum_probs=67.0

Q ss_pred             CceeEeecCCHHHHHH----HHHHHH----Hhh--hhhhcccCCCCCCCCCCCcccc------ccccChHHHHHHHHHHH
Q 021863          166 PGVFTFEMLQPRFCEL----LLAEVE----NFE--KWVNEAKFRIMRPNTMNKYGAV------LDDFGLETMLDKLMETY  229 (306)
Q Consensus       166 PdVY~FP~Ft~~FC~~----LIeE~E----~F~--~Ws~gs~~pi~RPntMN~YG~V------L~eiG~e~~~~~ll~~y  229 (306)
                      .++-..-+|++..-..    |+++++    ++-  .|+.+.-++     ..++++++      -.|+=++..+..-+-+-
T Consensus         9 ~~~l~vh~Fsd~~f~~~K~~~~~~i~~~~~n~~~~~~~~s~i~~-----~~~g~e~~~~~~~ksKqii~e~~La~~L~er   83 (418)
T PHA02869          9 NNQLAVHRFTETRFTSFKKELLVNLGISDLNDIKNICEDSKIFF-----PEKRTELLSIKDRKSKQIVFENSLNDDLLKK   83 (418)
T ss_pred             CCeEEEEEecHHHHHHHHHHHHHHhccccccccccccccceeec-----cccCceeEeeccccceeEEechHHHHHHHHH
Confidence            4677888999984444    444443    222  465544443     23344443      23455554333333333


Q ss_pred             hchhhhhhcccc-CCCCCcccceEEEEEecCCCCCCCccccC--------CceeeeeecCCCccCCceeeee
Q 021863          230 IRPLSKVFFAEV-GGSTLDSHHGFVVEYGKDRDVDLGFHVDD--------SEVTLNVCLGKQFTGGELFFRG  292 (306)
Q Consensus       230 i~Pl~~~Lfp~~-~g~~Ldsh~~FVVrY~p~~d~~L~~H~Dd--------SevTLNV~LgkdFeGGgl~F~g  292 (306)
                      |+++.-.-|-++ .--.+..+..| ++|.++.  .+.+|.|.        |.+||=+=|++.++||++.|.-
T Consensus        84 lr~lLp~~lk~~v~~V~lnerirf-yrY~kGq--~F~~H~Dg~~~rs~e~s~~tLLLYLNd~~~GGET~f~~  152 (418)
T PHA02869         84 LHALIYDELSTVVDSVTVENTVTL-IMYEKGD--YFARHRDFSTVFSKNIICVHLLLYLEQPETGGETVIYI  152 (418)
T ss_pred             HHHhhhHHhhCccceEEEcceEEE-EEECCCC--cccccccCceecCCCEEEEEEEEEEeccCCCCceEEEe
Confidence            333322222221 11133445444 5787664  45577776        6789999999999999999987

>PF13640 2OG-FeII_Oxy_3: 2OG-Fe(II) oxygenase superfamily; PDB: 3DKQ_B 3GZE_D 3HQR_A 2Y34_A 2G1M_A 2G19_A 3OUI_A 3OUJ_A 2HBU_A 2Y33_A

Probab=84.26  E-value=0.63  Score=36.16  Aligned_cols=40  Identities=35%  Similarity=0.510  Sum_probs=27.8

Q ss_pred             EEEEecCCCCCCCccccC-----CceeeeeecC-CC--ccCCceeeeecc
Q 021863          253 VVEYGKDRDVDLGFHVDD-----SEVTLNVCLG-KQ--FTGGELFFRGTR  294 (306)
Q Consensus       253 VVrY~p~~d~~L~~H~Dd-----SevTLNV~Lg-kd--FeGGgl~F~g~~  294 (306)
                      +.+|.+  ...+.+|+|.     ..+|+-+-|+ .+  ++||++.|....
T Consensus         3 ~~~y~~--G~~~~~H~D~~~~~~~~~t~llyL~~~~~~~~GG~l~~~~~~   50 (100)
T PF13640_consen    3 LNRYPP--GGFFGPHTDNSYDPHRRVTLLLYLNDPEWEFEGGELEFYPSK   50 (100)
T ss_dssp             EEEEET--TEEEEEEESSSCCCSEEEEEEEESS-CS-HCEE--EEETTTS
T ss_pred             EEEECc--CCEEeeeECCCCCCcceEEEEEEECCCCcccCCCEEEEeccc
Confidence            456643  4588899998     5677777787 44  799999999763

...

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	306
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	2e-04

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 42.5 bits (99), Expect = 2e-04
 Identities = 32/221 (14%), Positives = 77/221 (34%), Gaps = 70/221 (31%)

Query: 20  VVSGDLSQRQIQSEPASGVVA-PSQNQRLRLNPSKD---HK--------PESYDDMQLDF 67
           VV+       ++ +P    ++ PS    L++    +   H+        P+++D    D 
Sbjct: 407 VVNKLHKYSLVEKQPKESTISIPSIYLELKVKLENEYALHRSIVDHYNIPKTFD--SDDL 464

Query: 68  SPS-----IFSSLERYLPPPMLGLNREEKVKFMREILMKYLPQGERTRVQRHRDYR---Q 119
            P       +S    ++   +  +   E++   R +   +L            D+R   Q
Sbjct: 465 IPPYLDQYFYS----HIGHHLKNIEHPERMTLFRMV---FL------------DFRFLEQ 505

Query: 120 KIITNYQPLHRELYNLHIGNFFVPPFVKAIQDNTEESFRSIISEPSPGVFTFEMLQPRFC 179
           KI  +    +     L+            +Q    + ++  I +  P    +E       
Sbjct: 506 KIRHDSTAWNASGSILNT-----------LQQ--LKFYKPYICDNDP---KYER------ 543

Query: 180 ELLLAEVENF----EKWVNEAKF-RIMRPNTMNKYGAVLDD 215
             L+  + +F    E+ +  +K+  ++R   M +  A+ ++
Sbjct: 544 --LVNAILDFLPKIEENLICSKYTDLLRIALMAEDEAIFEE 582

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	306
3itq_A	216	Prolyl 4-hydroxylase, alpha subunit domain protei;	96.81
3dkq_A	243	PKHD-type hydroxylase SBAL_3634; putative oxygenas	96.51
2jig_A	224	Prolyl-4 hydroxylase; hydrolase; HET: PD2; 1.85A {	95.59
2hbt_A	247	EGL nine homolog 1; prolyl hydroxylase, hypoxia in	88.59

>3itq_A Prolyl 4-hydroxylase, alpha subunit domain protei; double-stranded beta helix, alpha-keto dependent non-heme iron oxygenase; 1.40A {Bacillus anthracis str}

Probab=96.81  E-value=0.0051  Score=55.04  Aligned_cols=116  Identities=21%  Similarity=0.278  Sum_probs=67.1

Q ss_pred             CCceeEee-cCCHHHHHHHHHHHHH-hhhhhhcccCCCCCCCCCCCccccccccChHHHHHHHHHHHhchhhhhhccccC
Q 021863          165 SPGVFTFE-MLQPRFCELLLAEVEN-FEKWVNEAKFRIMRPNTMNKYGAVLDDFGLETMLDKLMETYIRPLSKVFFAEVG  242 (306)
Q Consensus       165 cPdVY~FP-~Ft~~FC~~LIeE~E~-F~~Ws~gs~~pi~RPntMN~YG~VL~eiG~e~~~~~ll~~yi~Pl~~~Lfp~~~  242 (306)
                      .|.|+.++ +||++.|+.|++..+. +..-.-+.+..  ....-+-.++.|++   +.... -+.+.|+.++-.  | ..
T Consensus        38 ~P~i~~~~~fLs~~Ec~~Li~~a~~~l~~s~v~~~~~--~~~~RtS~~~wl~~---~~~v~-~i~~Ri~~~~gl--~-~~  108 (216)
T 3itq_A           38 EPLIVVLGNVLSDEECDELIELSKSKLARSKVGSSRD--VNDIRTSSGAFLDD---NELTA-KIEKRISSIMNV--P-AS  108 (216)
T ss_dssp             TTTEEEEESCSCHHHHHHHHHHHHHHHC--------C--CCCGGGTTCEECCC---CHHHH-HHHHHHHHHHTS--C-GG
T ss_pred             CCCEEEECCcCCHHHHHHHHHHhhcccccceeccCCc--cCCcEeeeeEEeCC---cHHHH-HHHHHHHHhcCc--e-ec
Confidence            69999998 9999999999999885 33310001100  00111112444555   22222 222223322211  1 00


Q ss_pred             CCCCcccceEEEEEecCCCCCCCccccCCc-----------eeeeeecCCCccCCceeeeeccc
Q 021863          243 GSTLDSHHGFVVEYGKDRDVDLGFHVDDSE-----------VTLNVCLGKQFTGGELFFRGTRC  295 (306)
Q Consensus       243 g~~Ldsh~~FVVrY~p~~d~~L~~H~DdSe-----------vTLNV~LgkdFeGGgl~F~g~~C  295 (306)
                          ..-.-.+++|.++.  ...+|+|...           +|+-+-|+..++||++.|-....
T Consensus       109 ----~~E~lqv~~Y~~G~--~y~~H~D~~~~~~~~~~~~R~~T~l~YLnd~~~GGeT~Fp~~~~  166 (216)
T 3itq_A          109 ----HGEGLHILNYEVDQ--QYKAHYDYFAEHSRSAANNRISTLVMYLNDVEEGGETFFPKLNL  166 (216)
T ss_dssp             ----GBCCCEEEEECBTC--CEEEECSSCCTTSGGGGGCEEEEEEEECSCCSEECCEEETTTTE
T ss_pred             ----cccceeEEEeCCCC--ccccccCCCcCCCcccCCceEEEEEEecccCCcCceeEecCCCC
Confidence                11134699998874  4688998643           89999999999999999976543

>3dkq_A PKHD-type hydroxylase SBAL_3634; putative oxygenase, structural genomics, JOI for structural genomics, JCSG; 2.26A {Shewanella baltica OS155}

Probab=96.51  E-value=0.0037  Score=57.07  Aligned_cols=121  Identities=15%  Similarity=0.276  Sum_probs=66.1

Q ss_pred             CceeEee-cCCHHHHHHHHHHHHHhhhhhhcccCCC-CCCCCCCCccccccccChHHHHHHHHHHHhchhhhh-hccccC
Q 021863          166 PGVFTFE-MLQPRFCELLLAEVENFEKWVNEAKFRI-MRPNTMNKYGAVLDDFGLETMLDKLMETYIRPLSKV-FFAEVG  242 (306)
Q Consensus       166 PdVY~FP-~Ft~~FC~~LIeE~E~F~~Ws~gs~~pi-~RPntMN~YG~VL~eiG~e~~~~~ll~~yi~Pl~~~-Lfp~~~  242 (306)
                      +.++.+| +||++.|++|++.++.- .|..+....- .-...-|+--..-++ -+-..+...+...+.   .. +|-.. 
T Consensus        19 ~~i~~i~dvLs~~Ec~~li~~~e~~-~~~dg~~t~g~~~~~vr~n~~l~~d~-~~~~~l~~~i~~~l~---~~~~f~~~-   92 (243)
T 3dkq_A           19 GMLIEIPNVFSKQEVSHLREQLDAR-RWIDGNQTSGAMATTRKRNQQLDKDD-PVAVALGQQIMDRLL---AHPQFVSA-   92 (243)
T ss_dssp             TTBEEECCSSCHHHHHHHHHHHHTS-CCEEECCCSSBSSCCCEEEEECCTTC-HHHHHHHHHHHHHHH---TCHHHHHH-
T ss_pred             CCEEEECCCCCHHHHHHHHHHHhhC-CCccCcccCCCccccceeeeEECCCC-HHHHHHHHHHHHHHc---cCcchhhc-
Confidence            4566665 89999999999999863 4654332110 001111221112222 121222222222221   11 11100 


Q ss_pred             CCCCcccceEEEEEecCCCCCCCccccCC-----------ceeeeeecCC--CccCCceeeeecc
Q 021863          243 GSTLDSHHGFVVEYGKDRDVDLGFHVDDS-----------EVTLNVCLGK--QFTGGELFFRGTR  294 (306)
Q Consensus       243 g~~Ldsh~~FVVrY~p~~d~~L~~H~DdS-----------evTLNV~Lgk--dFeGGgl~F~g~~  294 (306)
                      +-.....-..+.+|.++  ....+|+|.+           .+|+-+-|+.  +|+||++.|....
T Consensus        93 ~L~~~~e~~~~~rY~~G--~~y~~H~D~~~~~~~~~~~~r~~T~~lYLndp~~~~GGetvf~~~~  155 (243)
T 3dkq_A           93 ALPLQFYPPLFNRYQGG--ETFGYHIDNAIRSTPDGMIRTDLSATLFLSEPENYQGGELVIQDTY  155 (243)
T ss_dssp             HCEEEEEEEEEEEECTT--CEEEEECBCSEEEETTEEEECCEEEEEECSCGGGEEECCEEEEETT
T ss_pred             ccccccccceEEEECCC--CeeccCCCCCCCCCCCccccceEEEEEEeCCCCCCCCceEEEeeCC
Confidence            00112334568999887  5688999964           6788889998  9999999998754

>2jig_A Prolyl-4 hydroxylase; hydrolase; HET: PD2; 1.85A {Chlamydomonas reinhardtii} PDB: 3gze_A 2v4a_A 2jij_A

Probab=95.59  E-value=0.022  Score=49.93  Aligned_cols=117  Identities=17%  Similarity=0.271  Sum_probs=63.6

Q ss_pred             CCceeEee-cCCHHHHHHHHHHHHH-hhh--hhhcc-cCCCCCCCCCCCccccccccChHHHHHHHHHHHhchhhhhhcc
Q 021863          165 SPGVFTFE-MLQPRFCELLLAEVEN-FEK--WVNEA-KFRIMRPNTMNKYGAVLDDFGLETMLDKLMETYIRPLSKVFFA  239 (306)
Q Consensus       165 cPdVY~FP-~Ft~~FC~~LIeE~E~-F~~--Ws~gs-~~pi~RPntMN~YG~VL~eiG~e~~~~~ll~~yi~Pl~~~Lfp  239 (306)
                      -|.|+.++ +||++.|+.||+..+. +..  |..+. +... ..+.-+...+.|+.- .+..... +.+.|..++-  +|
T Consensus        19 ~P~i~~~~~fLs~~Ec~~li~~~~~~~~~s~v~~~~~g~~~-~~~~R~s~~~~l~~~-~~~~~~~-i~~ri~~~~g--l~   93 (224)
T 2jig_A           19 SPRAFLLKNFLSDEECDYIVEKARPKMVKSSVVDNESGKSV-DSEIRTSTGTWFAKG-EDSVISK-IEKRVAQVTM--IP   93 (224)
T ss_dssp             TTTEEEETTCSCHHHHHHHHHHHGGGCEECEEEETTTTEEE-ECSSBCSEEEECCTT-CSHHHHH-HHHHHHHHHT--CC
T ss_pred             CCCEEEEcccCCHHHHHHHHHHhhccCeeeeeecCCCCccc-ccCCEEEeeeEecCC-CCHHHHH-HHHHHHHHhC--CC
Confidence            57787665 8999999999999985 221  21111 1000 001111122233321 1122222 2222322221  11


Q ss_pred             ccCCCCCcccceEEEEEecCCCCCCCccccC--------------CceeeeeecCCCccCCceeeeec
Q 021863          240 EVGGSTLDSHHGFVVEYGKDRDVDLGFHVDD--------------SEVTLNVCLGKQFTGGELFFRGT  293 (306)
Q Consensus       240 ~~~g~~Ldsh~~FVVrY~p~~d~~L~~H~Dd--------------SevTLNV~LgkdFeGGgl~F~g~  293 (306)
                       ..    ..-..-+++|.++.  ...+|+|.              +.+|+-|=|+...+||++.|-..
T Consensus        94 -~~----~~e~~qv~rY~~G~--~y~~H~D~~~~~~~~~~~~~~~R~~T~l~YLnd~~~GGeT~Fp~~  154 (224)
T 2jig_A           94 -LE----NHEGLQVLHYHDGQ--KYEPHYDYFHDPVNAGPEHGGQRVVTMLMYLTTVEEGGETVLPNA  154 (224)
T ss_dssp             -GG----GBCCCEEEEEETTC--CEEEECCSSCCTTSSSCCCCSCEEEEEEEECSCCSEECCEEETTS
T ss_pred             -cc----cccceEEEecCCCc--cccCcccCCCCccccccccCCCeEEEEEEEecCCCCCCceeCCCc
Confidence             00    11134588999864  47889995              34888899999999999999765

>2hbt_A EGL nine homolog 1; prolyl hydroxylase, hypoxia inducible factor, HIF, 2- oxoglutarate, oxygenase, oxidoreductase; HET: UN9; 1.60A {Homo sapiens} PDB: 2hbu_A* 2g1m_A* 3hqu_A* 3hqr_A* 2y33_A* 2y34_A* 2g19_A* 3ouj_A* 3ouh_A* 3oui_A*

Probab=88.59  E-value=1.3  Score=39.79  Aligned_cols=42  Identities=29%  Similarity=0.279  Sum_probs=32.0

Q ss_pred             EEEEEecCCCCCCCccccCC-----ceeeeeecCCCc----cCCceeeeecc
Q 021863          252 FVVEYGKDRDVDLGFHVDDS-----EVTLNVCLGKQF----TGGELFFRGTR  294 (306)
Q Consensus       252 FVVrY~p~~d~~L~~H~DdS-----evTLNV~LgkdF----eGGgl~F~g~~  294 (306)
                      -+..|.+ ....+.+|+|..     .+|+-+-|++++    .||+|+|....
T Consensus       120 ~~~~Y~~-~G~~y~~H~D~~~~~~R~~T~vlYLN~~w~~~~~GG~l~~~~~~  170 (247)
T 2hbt_A          120 MVACYPG-NGTGYVRHVDNPNGDGRCVTCIYYLNKDWDAKVSGGILRIFPEG  170 (247)
T ss_dssp             EEEEECS-SSCCEEEECSSCSCCSEEEEEEEECBTTCCHHHHBCCEEECCTT
T ss_pred             EEEEecC-CCCcccccccCCCCCCceEEEEEEeCCCCCCCCCceeEEEecCC
Confidence            4678976 346888999963     689999999854    59999987543

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	306
d2iuwa1	210	AlkB homolog 3 {Human (Homo sapiens) [TaxId: 9606]	80.47

>d2iuwa1 b.82.2.10 (A:70-279) AlkB homolog 3 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Double-stranded beta-helix
superfamily: Clavaminate synthase-like
family: AlkB-like
domain: AlkB homolog 3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=80.47  E-value=0.62  Score=37.74  Aligned_cols=30  Identities=10%  Similarity=0.249  Sum_probs=24.4

Q ss_pred             CCceeEee-cCCHHHHHHHHHHHHHhhhhhh
Q 021863          165 SPGVFTFE-MLQPRFCELLLAEVENFEKWVN  194 (306)
Q Consensus       165 cPdVY~FP-~Ft~~FC~~LIeE~E~F~~Ws~  194 (306)
                      ++||+-+| +|+++-.+.|++++.+-..|..
T Consensus        18 ~~~l~y~p~fLs~~e~~~Ll~~L~~e~~w~~   48 (210)
T d2iuwa1          18 VSRVCLYPGFVDVKEADWILEQLCQDVPWKQ   48 (210)
T ss_dssp             CEEEEEETTSSCHHHHHHHHHHHHHHSCCBC
T ss_pred             cceEEEECCcCCHHHHHHHHHHHHhhCCccc
Confidence            47888887 7799999999999987666643