Citrus Sinensis ID: 021910

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-----
Protein Sequence
MMKGAELELPPGFRFHPTDEELVNHYLCRKCAGLPISVPIIAEIDLYKYDPWELPEMARYGEKEWYFFSPRDRKYPNGSRPNRAAGSGYWKATGADKPIGKPKTLGIKKALVFYAGKAPKGIKTNWIMHEYRPANVHRSPATKNNLRLDDWVLCRLYNKKGRMEKHYPSDQKSIGFPELEEDRKPNINISRQEVALGMPPHQGSPVPMMNDLLNMDTSDSVPRLQTDSSCSEHVLSPEIACDKEVQSVPKWNDLGNALNDDYNQFSFNYMDTNSFQDDPFGPQVQYQMDQLSPYQDLFMILQKPF
Secondary Structure (PSIPRED)
ccccccccccccccccccHHHHHHHHHHHHHcccccccccEEEEEcccccccccccccccccccEEEEccccccccccccccccccccccccccccccccccccccEEEEEEEEccccccccccccEEEEEcccccccccccccccccccEEEEEEEEEcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHccccccc
Secondary Structure Prediction (SSPRO)
ccccccccccccccccccHHHHHHHHHHHHHccccccccEEEEEEccccccccccHHccccccEEEEEcccccccccccccccccccccEEccccccccccccEEEEEEEEEEEcccccccccccEEEEEEEEcccccccccccccccccEEEEEEEEccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHcccccccccccccccccccccccccHHcccccccccHHHHHHHccccc
Coil and Loop (DISEMBL)
mmkgaelelppgfrfhptdeeLVNHYLCrkcaglpisvpiiaeidlykydpwelpemarygekewyffsprdrkypngsrpnraagsgywkatgadkpigkpktlGIKKALVFYagkapkgiktnwimheyrpanvhrspatknnlrldDWVLCRLYnkkgrmekhypsdqksigfpeleedrkpninisrqevalgmpphqgspvpmmndllnmdtsdsvprlqtdsscsehvlspeiacdkevqsvpkwndlgnalnddynqfsfnymdtnsfqddpfgpqvqyqmdqlspyQDLFMILQKPF
Flexible Loop (DISEMBL)
mmkgaelelppgfrfHPTDEELVNHYLCRKCAGLPISVPIIAEIDLYKYDPWELPEMARYGEKEWyffsprdrkypngsrpnraagsgywkatgadkpigkpktLGIKKALVFYAGKAPKGIKTNWIMHEYRpanvhrspatknnlrlddWVLCRLYNKkgrmekhypsdqksigfpeleedrkpNINISRQEVALGMPPHQGSPVPMMNDLLNMDTSDSVPRLQTDSSCSEHVLSpeiacdkevqSVPKWNDLGNALNDDYNQFSFNYMDTNSFQDDPFGPQVQYQMDQLSPYQDLFMILQKPF
Low Complexity Region (SEG)
MMKGAELELPPGFRFHPTDEELVNHYLCRKCAGLPISVPIIAEIDLYKYDPWELPEMARYGEKEWYFFSPRDRKYPNGSRPNRAAGSGYWKATGADKPIGKPKTLGIKKALVFYAGKAPKGIKTNWIMHEYRPANVHRSPATKNNLRLDDWVLCRLYNKKGRMEKHYPSDQKSIGFPELEEDRKPNINISRQEVALGMPPHQGSPVPMMNDLLNMDTSDSVPRLQTDSSCSEHVLSPEIACDKEVQSVPKWNDLGNALNDDYNQFSFNYMDTNSFQDDPFGPQVQYQMDQLSPYQDLFMILQKPF
Disordered region (IsUnstruct)
************FRFHPTDEELVNHYLCRKCAGLPISVPIIAEIDLYKYDPWELPEMARYGEKEWYFFS*******************YWKATGADKPIGKPKTLGIKKALVFYAGKAPKGIKTNWIMHEYRPANVHRSPATKNNLRLDDWVLCRLYNK*******************************************************************************IACDKEVQSVPKWNDLGNALNDDYNQFSFNYMDTNSFQDDPFGPQVQYQMDQLSPYQDLFMIL****
Disordered Region (DISOPRED)
******L***PGFRFHPTDEELVNHYLCRKCAGLPISVPIIAEIDLYKYDPWELPEMARYGEKEWYFFSPRDRKYPNGSRPNRAAGSGYWKATGADKPIGKPKTLGIKKALVFYAGKAPKGIKTNWIMHEYRPA***************DWVLCRLYN*************************************************************************************************************************************SPYQDLFMILQKP*
Disordered Region (DISEMBL)
MMKGAELELPPGFRFHPTDEELVNHYLCRKCAGLPISVPIIAEIDLYKYDPWELPEMARYGEKEWYFFSPRDRKYPNGSRPNRAAGSGYWKATGADKPIGKPKTLGIKKALVFYAGKAPKGIKTNWIMHEYRPANVHRSPATKNNLRLDDWVLCRLYNKKGRMEKHYPSDQKSIGFPELEEDRKPNINISRQEVALGMPPHQGSPVPMMNDLLNMDTSD*************HVLSPEIACDKEVQSVPKWNDLGNALNDDYNQFSFNYMDTNSFQDDPFGPQVQYQMDQLSPYQDLFMILQKPF
Disordered Region (DISPRO)
*******ELPPGFRFHPTDEELVNHYLCRKCAGLPISVPIIAEIDLYKYDPWELPEMARYGEKEWYFFSPRDRKYPNGSRPNRAAGSGYWKATGADKPIGKPKTLGIKKALVFYAGKAPKGIKTNWIMHEYRPANVHRS*****NLRLDDWVLCRLYNKKG***********************************************************V****T*SSCSEHVLSPEIACDKEVQSVPKWNDLGNALNDDYNQFSFNYMDTNSFQDDPFGPQVQYQMDQLSPYQDLFMILQKPF
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MMKGAELELPPGFRFHPTDEELVNHYLCRKCAGLPISVPIIAEIDLYKYDPWELPEMARYGEKEWYFFSPRDRKYPNGSRPNRAAGSGYWKATGADKPIGKPKTLGIKKALVFYAGKAPKGIKTNWIMHEYRPANVHRSPATKNNLRLDDWVLCRLYNKKGRMEKHYPSDQKSIGFPELEEDRKPNINISRQEVALGMPPHQGSPVPMMNDLLNMDTSDSVPRLQTDSSCSEHVLSPEIACDKEVQSVPKWNDLGNALNDDYNQFSFNYMDTNSFQDDPFGPQVQYQMDQLSPYQDLFMILQKPF
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	305	2.2.26 [Sep-21-2011]
Q39013	289	NAC domain-containing pro	yes	no	0.921	0.972	0.633	4e-96
Q8H115	312	NAC domain-containing pro	no	no	0.819	0.801	0.595	1e-91
Q9C598	283	Protein ATAF2 OS=Arabidop	no	no	0.845	0.911	0.602	3e-91
Q7F2L3	303	NAC domain-containing pro	yes	no	0.803	0.808	0.679	8e-91
Q53NF7	329	NAC domain-containing pro	no	no	0.954	0.884	0.478	5e-77
Q52QH4	318	NAC domain-containing pro	no	no	0.527	0.506	0.733	3e-68
A0SPJ3	405	NAC transcription factor	N/A	no	0.514	0.387	0.646	4e-61
A0SPJ9	402	NAC transcription factor	N/A	no	0.540	0.410	0.632	4e-61
A2YMR0	425	NAC transcription factor	N/A	no	0.521	0.374	0.622	5e-61
D2SMN4	406	NAC transcription factor	N/A	no	0.586	0.440	0.580	7e-61

>sp|Q39013|NAC2_ARATH NAC domain-containing protein 2 OS=Arabidopsis thaliana GN=NAC002 PE=2 SV=2

 Score =  351 bits (901), Expect = 4e-96,   Method: Compositional matrix adjust.
 Identities = 192/303 (63%), Positives = 216/303 (71%), Gaps = 22/303 (7%)

Query: 7   LELPPGFRFHPTDEELVNHYLCRKCAGLPISVPIIAEIDLYKYDPWELPEMARYGEKEWY 66
           L+LPPGFRFHPTDEELV HYLCRKCA   I+VPIIAEIDLYKYDPWELP +A YGEKEWY
Sbjct: 5   LQLPPGFRFHPTDEELVMHYLCRKCASQSIAVPIIAEIDLYKYDPWELPGLALYGEKEWY 64

Query: 67  FFSPRDRKYPNGSRPNRAAGSGYWKATGADKPIGKPKTLGIKKALVFYAGKAPKGIKTNW 126
           FFSPRDRKYPNGSRPNR+AGSGYWKATGADKPIG PK +GIKKALVFYAGKAPKG KTNW
Sbjct: 65  FFSPRDRKYPNGSRPNRSAGSGYWKATGADKPIGLPKPVGIKKALVFYAGKAPKGEKTNW 124

Query: 127 IMHEYRPANVHRSP-ATKNNLRLDDWVLCRLYNKKGRMEKHYPSDQKSIGFPELEEDRKP 185
           IMHEYR A+V RS    KN+LRLDDWVLCR+YNKKG  E+  P      G   +EE  KP
Sbjct: 125 IMHEYRLADVDRSVRKKKNSLRLDDWVLCRIYNKKGATERRGPPPPVVYGDEIMEE--KP 182

Query: 186 NINISRQEVALGMPPHQGSPVPMMNDLLNMDTSDSVPRLQ-TDSSCSEHVLSPEIACDKE 244
            +     E+ +  PP Q S      +    DTSDSVP+L  TDSSCSE V+SPE     E
Sbjct: 183 KVT----EMVMPPPPQQTS------EFAYFDTSDSVPKLHTTDSSCSEQVVSPEFTS--E 230

Query: 245 VQSVPKWNDLGNALNDDYNQ--FSFNYMDTNSFQDDPFGPQVQYQMDQLSPYQDLFMILQ 302
           VQS PKW D     ND+ N   F FNY+D     D+ FG       +Q+ P QD+FM +Q
Sbjct: 231 VQSEPKWKDWSAVSNDNNNTLDFGFNYIDATV--DNAFGGGG--SSNQMFPLQDMFMYMQ 286

Query: 303 KPF 305
           KP+
Sbjct: 287 KPY 289

Arabidopsis thaliana (taxid: 3702)

>sp|Q8H115|NA102_ARATH NAC domain-containing protein 102 OS=Arabidopsis thaliana GN=NAC102 PE=1 SV=1

 Score =  336 bits (862), Expect = 1e-91,   Method: Compositional matrix adjust.
 Identities = 184/309 (59%), Positives = 207/309 (66%), Gaps = 59/309 (19%)

Query: 5   AELELPPGFRFHPTDEELVNHYLCRKCAGLPISVPIIAEIDLYKYDPWELPEMARYGEKE 64
           AEL LP GFRFHPTDEELV  YLCR+CA  PI+VP+IAEIDLYK++PWELPEMA YGEKE
Sbjct: 46  AELNLPAGFRFHPTDEELVKFYLCRRCASEPINVPVIAEIDLYKFNPWELPEMALYGEKE 105

Query: 65  WYFFSPRDRKYPNGSRPNRAAGSGYWKATGADKPIGKPKTLGIKKALVFYAGKAPKGIKT 124
           WYFFS RDRKYPNGSRPNRAAG+GYWKATGADKPIGKPKTLGIKKALVFYAGKAPKGIKT
Sbjct: 106 WYFFSHRDRKYPNGSRPNRAAGTGYWKATGADKPIGKPKTLGIKKALVFYAGKAPKGIKT 165

Query: 125 NWIMHEYRPANVHRSPAT--KNNLRLDDWVLCRLYNKKGRMEKHYPSDQKSIGFPELEED 182
           NWIMHEYR ANV RS +T  KNNLRLDDWVLCR+YNKKG MEK+ P+  +          
Sbjct: 166 NWIMHEYRLANVDRSASTNKKNNLRLDDWVLCRIYNKKGTMEKYLPAAAE---------- 215

Query: 183 RKPNINISRQEVALGMPPHQGSPVPMMNDLLNMDTSDSVPRLQTDSSCSEHVLSPEIACD 242
            KP   +S                                   +DS CS HV+SP++ C 
Sbjct: 216 -KPTEKMS----------------------------------TSDSRCSSHVISPDVTCS 240

Query: 243 K--EVQSVPKWNDLGNAL---NDDYNQFSFNYMDTNSFQDDPFGPQVQYQ-MDQLSPYQD 296
              EV+S PKW +L +AL   NDD + FS         Q+D F PQ QYQ  D +  +QD
Sbjct: 241 DNWEVESEPKWINLEDALEAFNDDTSMFS----SIGLLQNDAFVPQFQYQSSDFVDSFQD 296

Query: 297 LFMILQKPF 305
            F   QKPF
Sbjct: 297 PFE--QKPF 303

May be involved in regulation of seed germination under flooding.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9C598|NAC81_ARATH Protein ATAF2 OS=Arabidopsis thaliana GN=NAC081 PE=1 SV=1

 Score =  335 bits (858), Expect = 3e-91,   Method: Compositional matrix adjust.
 Identities = 180/299 (60%), Positives = 202/299 (67%), Gaps = 41/299 (13%)

Query: 5   AELELPPGFRFHPTDEELVNHYLCRKCAGLPISVPIIAEIDLYKYDPWELPEMARYGEKE 64
           +EL LP GFRFHPTDEELV  YLCRKCA   IS P+IAEIDLYK++PWELPEM+ YGEKE
Sbjct: 3   SELNLPAGFRFHPTDEELVKFYLCRKCASEQISAPVIAEIDLYKFNPWELPEMSLYGEKE 62

Query: 65  WYFFSPRDRKYPNGSRPNRAAGSGYWKATGADKPIGKPKTLGIKKALVFYAGKAPKGIKT 124
           WYFFSPRDRKYPNGSRPNRAAG+GYWKATGADKPIGKPKTLGIKKALVFYAGKAPKGIKT
Sbjct: 63  WYFFSPRDRKYPNGSRPNRAAGTGYWKATGADKPIGKPKTLGIKKALVFYAGKAPKGIKT 122

Query: 125 NWIMHEYRPANVHRSPAT--KNNLRLDDWVLCRLYNKKGRMEKHYPSDQKSIGFPELEED 182
           NWIMHEYR ANV RS +   KNNLRLDDWVLCR+YNKKG MEK++P+D+K       E+ 
Sbjct: 123 NWIMHEYRLANVDRSASVNKKNNLRLDDWVLCRIYNKKGTMEKYFPADEKPRTTTMAEQS 182

Query: 183 RKPNINISRQEVALGMPPHQGSPVPMMNDLLNMDTSDSV-PRLQTDSSCSE----HVLSP 237
             P                              DTSDS  P LQ D S S     HV+SP
Sbjct: 183 SSP-----------------------------FDTSDSTYPTLQEDDSSSSGGHGHVVSP 213

Query: 238 EIACDKEVQSVPKWNDLGNALNDDYNQFSFNYMDTNSFQDDPFGPQVQYQMDQLSPYQD 296
           ++    EVQS PKW +L +AL         + M+    Q D F PQ  YQ D  + +QD
Sbjct: 214 DVL---EVQSEPKWGELEDALEAFDTSMFGSSMEL--LQPDAFVPQFLYQSDYFTSFQD 267

Arabidopsis thaliana (taxid: 3702)

>sp|Q7F2L3|NAC48_ORYSJ NAC domain-containing protein 48 OS=Oryza sativa subsp. japonica GN=NAC48 PE=2 SV=1

 Score =  333 bits (854), Expect = 8e-91,   Method: Compositional matrix adjust.
 Identities = 174/256 (67%), Positives = 193/256 (75%), Gaps = 11/256 (4%)

Query: 1   MMKGAELELPPGFRFHPTDEELVNHYLCRKCAGLPISVPIIAEIDLYKYDPWELPEMARY 60
           M  G +L+LPPGFRFHPTDEELV HYLCR+CAGLPI+VPIIAEIDLYK+DPW+LP MA Y
Sbjct: 1   MSGGQDLQLPPGFRFHPTDEELVMHYLCRRCAGLPIAVPIIAEIDLYKFDPWQLPRMALY 60

Query: 61  GEKEWYFFSPRDRKYPNGSRPNRAAGSGYWKATGADKPIGKPKTLGIKKALVFYAGKAPK 120
           GEKEWYFFSPRDRKYPNGSRPNRAAGSGYWKATGADKP+G PK + IKKALVFYAGKAPK
Sbjct: 61  GEKEWYFFSPRDRKYPNGSRPNRAAGSGYWKATGADKPVGSPKPVAIKKALVFYAGKAPK 120

Query: 121 GIKTNWIMHEYRPANVHRSPATKNNLRLDDWVLCRLYNKKGRMEKHYPSDQKSIGFPELE 180
           G KTNWIMHEYR A+V RS   KN+LRLDDWVLCR+YNKKG +EK   +   + G     
Sbjct: 121 GEKTNWIMHEYRLADVDRSARKKNSLRLDDWVLCRIYNKKGGLEKPPAAAVAAAGMVSSG 180

Query: 181 E--DRKPNINISRQEVALGMPPHQGSPV--PMMNDLLNM--DTSDSVPRLQTDSSCSEHV 234
               RKP + ++    A+  PP Q   V  P   DL       SDS+PRL  DSSCSE V
Sbjct: 181 GGVQRKPMVGVN---AAVSSPPEQKPVVAGPAFPDLAAYYDRPSDSMPRLHADSSCSEQV 237

Query: 235 LSPEIACDKEVQSVPK 250
           LSPE AC  EVQS PK
Sbjct: 238 LSPEFAC--EVQSQPK 251

Oryza sativa subsp. japonica (taxid: 39947)

>sp|Q53NF7|NAC71_ORYSJ NAC domain-containing protein 71 OS=Oryza sativa subsp. japonica GN=NAC71 PE=2 SV=1

 Score =  288 bits (736), Expect = 5e-77,   Method: Compositional matrix adjust.
 Identities = 164/343 (47%), Positives = 204/343 (59%), Gaps = 52/343 (15%)

Query: 1   MMKGAELELPPGFRFHPTDEELVNHYLCRKCAGLPISVPIIAEIDLYKYDPWELPEMARY 60
           M  G  L+LPPGFRFHPTD+ELV +YLCRKC GLP++ P+IAE+DLYK++PW+LPE A  
Sbjct: 1   MECGGALQLPPGFRFHPTDDELVMYYLCRKCGGLPLAAPVIAEVDLYKFNPWDLPERAMG 60

Query: 61  GEKEWYFFSPRDRKYPNGSRPNRAAGSGYWKATGADKPIGKPKTLGIKKALVFYAGKAPK 120
           GEKEWYFFSPRDRKYPNG RPNRAAG+GYWKATGADKP+G P+ + IKKALVFYAGK PK
Sbjct: 61  GEKEWYFFSPRDRKYPNGQRPNRAAGTGYWKATGADKPVGSPRAVAIKKALVFYAGKPPK 120

Query: 121 GIKTNWIMHEYRPANVHRSPATK-------NNLRLDDWVLCRLYNKKGRMEKHYPSDQKS 173
           G+KTNWIMHEYR A+V RS A +       N LRLDDWVLCR+YNKKG +E++   D   
Sbjct: 121 GVKTNWIMHEYRLADVDRSAAARKLSKSSHNALRLDDWVLCRIYNKKGVIERYDTVDAG- 179

Query: 174 IGFPELEEDRKPNINISRQEVALGMPPHQGSPVPM------------MNDLLNMDTS--- 218
                  ED KP    +  +          + + +             +++L  D S   
Sbjct: 180 -------EDVKPAAAAAAAKGGRIGGGGGAAAMKVELSDYGFYDQEPESEMLCFDRSGSA 232

Query: 219 --DSVPRLQTDSSCSEHVLSPEIACD--------KEVQSVPKWNDLG------NALNDDY 262
             DS+PRL TDSS SEHVLSP  + D           +S P     G       A+ DD 
Sbjct: 233 DRDSMPRLHTDSSGSEHVLSPSPSPDDFPGGGDHDYAESQPSGGCGGWPGVDWAAVGDD- 291

Query: 263 NQFSFNYMDTNSFQDDPFGPQVQYQMDQLSPYQDLFMILQKPF 305
                 ++  +S  + P            + + D+F  LQKPF
Sbjct: 292 -----GFVIDSSLFELPSPAAFSRAAGDGAAFGDMFTYLQKPF 329

Oryza sativa subsp. japonica (taxid: 39947)

>sp|Q52QH4|NAC68_ORYSJ NAC domain-containing protein 68 OS=Oryza sativa subsp. japonica GN=NAC68 PE=2 SV=1

 Score =  258 bits (660), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 121/165 (73%), Positives = 138/165 (83%), Gaps = 4/165 (2%)

Query: 5   AELELPPGFRFHPTDEELVNHYLCRKCAGLPISVPIIAEIDLYKYDPWELPEMARYGEKE 64
           AEL LPPGFRFHPTDEELV HYLCRK A  P+ VPIIAE+DLYK DPW+LPE A +G KE
Sbjct: 17  AELNLPPGFRFHPTDEELVVHYLCRKVARQPLPVPIIAEVDLYKLDPWDLPEKALFGRKE 76

Query: 65  WYFFSPRDRKYPNGSRPNRAAGSGYWKATGADKPI---GKPKTLGIKKALVFYAGKAPKG 121
           WYFF+PRDRKYPNGSRPNRAAG GYWKATGADKP+   G  +T+GIKKALVFY+GKAP+G
Sbjct: 77  WYFFTPRDRKYPNGSRPNRAAGRGYWKATGADKPVAPKGSARTVGIKKALVFYSGKAPRG 136

Query: 122 IKTNWIMHEYRPANVHRSP-ATKNNLRLDDWVLCRLYNKKGRMEK 165
           +KT+WIMHEYR A+  R+P   K + +LD+WVLCRLYNKK   EK
Sbjct: 137 VKTDWIMHEYRLADADRAPGGKKGSQKLDEWVLCRLYNKKNNWEK 181

Oryza sativa subsp. japonica (taxid: 39947)

>sp|A0SPJ3|NAMA1_TRIDB NAC transcription factor NAM-A1 OS=Triticum durum GN=NAM-A1 PE=2 SV=1

 Score =  234 bits (598), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 115/178 (64%), Positives = 130/178 (73%), Gaps = 21/178 (11%)

Query: 3   KGAELELPPGFRFHPTDEELVNHYLCRKCAGLPISVPIIAEIDLYKYDPWELPEMARYGE 62
           +G+  ELPPGFRFHPTDEELV HYL +K A +P+ V IIAE+DLYK+DPWELPE A +GE
Sbjct: 27  RGSAPELPPGFRFHPTDEELVVHYLKKKAAKVPLPVTIIAEVDLYKFDPWELPEKATFGE 86

Query: 63  KEWYFFSPRDRKYPNGSRPNRAAGSGYWKATGADKPIGKPKT--------LGIKKALVFY 114
           +EWYFFSPRDRKYPNG+RPNRAA SGYWKATG DKPI    T        LG+KKALVFY
Sbjct: 87  QEWYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPILASGTGCGLVREKLGVKKALVFY 146

Query: 115 AGKAPKGIKTNWIMHEYRPANVHRSPATKN-------------NLRLDDWVLCRLYNK 159
            GK PKG+KTNWIMHEYR  +V  S  T               +LRLDDWVLCR+Y K
Sbjct: 147 RGKPPKGLKTNWIMHEYRLTDVSGSTTTSRPPPPVTGGSRAAASLRLDDWVLCRIYKK 204

Transcription factor of the NAC family associated with the grain protein content (GPC). Accelerates senescence and increases nutrient remobilization from leaves to developing grains. The tetraploid cultivated wheat (T.durum) contains one additional gene encoding for a functional protein (NAM-B2) and one extra pseudogene (NAM-B1) (PubMed:17124321).

Triticum durum (taxid: 4567)

>sp|A0SPJ9|NAM2_HORVD NAC transcription factor NAM-2 OS=Hordeum vulgare var. distichum GN=NAM-2 PE=4 SV=1

 Score =  234 bits (598), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 117/185 (63%), Positives = 136/185 (73%), Gaps = 20/185 (10%)

Query: 4   GAELELPPGFRFHPTDEELVNHYLCRKCAGLPISVPIIAEIDLYKYDPWELPEMARYGEK 63
           G+  ELPPGFRFHPTDEELV HYL +K A +P+ V IIAE+DLYK+DPWELPE A +GE+
Sbjct: 23  GSAPELPPGFRFHPTDEELVVHYLKKKAAKVPLPVTIIAEVDLYKFDPWELPEKATFGEQ 82

Query: 64  EWYFFSPRDRKYPNGSRPNRAAGSGYWKATGADKPI-----GKPKTLGIKKALVFYAGKA 118
           EWYFFSPRDRKYPNG+RPNRAA SGYWKATG DKPI     G+ K +G+K ALVFY GK 
Sbjct: 83  EWYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPILASGCGREK-VGVKXALVFYRGKP 141

Query: 119 PKGIKTNWIMHEYRPANVHRSPATKN-----------NLRLDDWVLCRLYNKKGRMEKHY 167
           PKG+KTNWIMHEYR  +   S AT             +LRLDDWVLCR+Y K   + K  
Sbjct: 142 PKGLKTNWIMHEYRLTDASSSAATSRPPPVTGGSRAASLRLDDWVLCRIYKK---INKAA 198

Query: 168 PSDQK 172
            +DQ+
Sbjct: 199 AADQQ 203

Transcription factor of the NAC family associated with the grain protein content (GPC). Accelerates senescence and increases nutrient remobilization from leaves to developing grains. Sequences of 11 European varieties of H.vulgare tested belongs to the same haplotype while the sequence found in H.spontaneum, an ancestor of the cultivated H.vulgare which has a higher GPC, belongs to an other haplotype.

Hordeum vulgare var. distichum (taxid: 112509)

>sp|A2YMR0|NAC10_ORYSI NAC transcription factor ONAC010 OS=Oryza sativa subsp. indica GN=ONAC010 PE=3 SV=1

 Score =  234 bits (597), Expect = 5e-61,   Method: Compositional matrix adjust.
 Identities = 112/180 (62%), Positives = 129/180 (71%), Gaps = 21/180 (11%)

Query: 4   GAELELPPGFRFHPTDEELVNHYLCRKCAGLPISVPIIAEIDLYKYDPWELPEMARYGEK 63
           G+  ELPPGFRFHPTDEELV HYL +K A +P+ V IIAE+DLYK+DPWELPE A +GE+
Sbjct: 24  GSAPELPPGFRFHPTDEELVVHYLKKKAASVPLPVTIIAEVDLYKFDPWELPEKANFGEQ 83

Query: 64  EWYFFSPRDRKYPNGSRPNRAAGSGYWKATGADKPI----GKPKTLGIKKALVFYAGKAP 119
           EWYFFSPRDRKYPNG+RPNRAA SGYWKATG DKPI       + +G+KKALVFY GK P
Sbjct: 84  EWYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPIMASGSTREKVGVKKALVFYRGKPP 143

Query: 120 KGIKTNWIMHEYRPANVHRSPAT-----------------KNNLRLDDWVLCRLYNKKGR 162
           KG+KTNWIMHEYR  +   S A                    +LRLDDWVLCR+Y K  +
Sbjct: 144 KGVKTNWIMHEYRLTDTSSSAAAVATTRQPPPPITGGSRGAVSLRLDDWVLCRIYKKTNK 203

Transcription factor of the NAC family associated with male fertility.

Oryza sativa subsp. indica (taxid: 39946)

>sp|D2SMN4|NAMB1_HORVS NAC transcription factor NAM-B1 OS=Hordeum vulgare subsp. spontaneum GN=NAM-B1 PE=4 SV=1

 Score =  234 bits (596), Expect = 7e-61,   Method: Compositional matrix adjust.
 Identities = 115/198 (58%), Positives = 134/198 (67%), Gaps = 19/198 (9%)

Query: 4   GAELELPPGFRFHPTDEELVNHYLCRKCAGLPISVPIIAEIDLYKYDPWELPEMARYGEK 63
           G+  ELPPGFRFHPTDEELV HYL +K A  P+ V IIAE+DLYK+DPWELPE A +GE 
Sbjct: 30  GSAPELPPGFRFHPTDEELVVHYLKKKAAKAPLPVTIIAEVDLYKFDPWELPEKATFGEH 89

Query: 64  EWYFFSPRDRKYPNGSRPNRAAGSGYWKATGADKPIGKPKT------LGIKKALVFYAGK 117
           EWYFFSPRDRKYPNG+RPNRAA SGYWKATG DKPI    T      +G+KKALVFY GK
Sbjct: 90  EWYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPILASATGCGREKVGVKKALVFYRGK 149

Query: 118 APKGIKTNWIMHEYRPANVHRSPATKN-------------NLRLDDWVLCRLYNKKGRME 164
            P+G+KTNWIMHEYR         T +             +LRLDDWVLCR+Y K  +  
Sbjct: 150 PPRGLKTNWIMHEYRLTGASAGSTTTSRPPPVTGGSRAPASLRLDDWVLCRIYKKTSKAA 209

Query: 165 KHYPSDQKSIGFPELEED 182
                +Q+S+   +  ED
Sbjct: 210 AAVGDEQRSMECEDSVED 227

Transcription factor of the NAC family associated with the grain protein content (GPC). Sequences of the 11 European varieties of H.vulgare tested belongs to the same haplotype while the sequence found in H.spontaneum, an ancestor of the cultivated H.vulgare which has a higher GPC, belongs to an other haplotype.

Hordeum vulgare subsp. spontaneum (taxid: 77009)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	305
148615629	305	NAC domain protein [Citrus sinensis]	1.0	1.0	0.980	1e-178
224081060	307	NAC domain protein, IPR003441 [Populus t	0.957	0.951	0.727	1e-121
224093630	304	NAC domain protein, IPR003441 [Populus t	0.954	0.957	0.721	1e-119
255563837	349	NAC domain-containing protein, putative	0.947	0.828	0.726	1e-119
171452372	296	nam-like protein [Bruguiera gymnorhiza]	0.954	0.983	0.702	1e-118
21105734	312	nam-like protein 3 [Petunia x hybrida]	0.967	0.945	0.649	1e-111
154362215	303	putative NAC transcription factor [Avice	0.967	0.973	0.663	1e-110
124021383	298	NAC transcription factor [Cucumis melo]	0.947	0.969	0.676	1e-109
356508929	291	PREDICTED: NAC domain-containing protein	0.927	0.972	0.660	1e-108
356512866	298	PREDICTED: NAC domain-containing protein	0.934	0.956	0.660	1e-108

>gi|148615629|gb|ABQ96643.1| NAC domain protein [Citrus sinensis]

 Score =  629 bits (1623), Expect = e-178,   Method: Compositional matrix adjust.
 Identities = 299/305 (98%), Positives = 303/305 (99%)

Query: 1   MMKGAELELPPGFRFHPTDEELVNHYLCRKCAGLPISVPIIAEIDLYKYDPWELPEMARY 60
           MMKGAELELPPGFRFHPTDEELVNHYLCRKCAGLPISVPIIAEIDLYKYDPWELPEMARY
Sbjct: 1   MMKGAELELPPGFRFHPTDEELVNHYLCRKCAGLPISVPIIAEIDLYKYDPWELPEMARY 60

Query: 61  GEKEWYFFSPRDRKYPNGSRPNRAAGSGYWKATGADKPIGKPKTLGIKKALVFYAGKAPK 120
           GEKEWYFFSPRDRKYPNGSRPNRAAGSGYWKATGADKPIGKPKTLGIKKALVFYAGKAPK
Sbjct: 61  GEKEWYFFSPRDRKYPNGSRPNRAAGSGYWKATGADKPIGKPKTLGIKKALVFYAGKAPK 120

Query: 121 GIKTNWIMHEYRPANVHRSPATKNNLRLDDWVLCRLYNKKGRMEKHYPSDQKSIGFPELE 180
           GIKTNWIMHEYRPANVHRSPATKNNLRLDDWVLCRLY+KKGRMEKHYPSDQKSIGFPELE
Sbjct: 121 GIKTNWIMHEYRPANVHRSPATKNNLRLDDWVLCRLYDKKGRMEKHYPSDQKSIGFPELE 180

Query: 181 EDRKPNINISRQEVALGMPPHQGSPVPMMNDLLNMDTSDSVPRLQTDSSCSEHVLSPEIA 240
           EDRKPNINISRQEVALGMPPHQGSP PMMNDLL+MDTSDSVPRLQTDSSCSEHVLSPEI 
Sbjct: 181 EDRKPNINISRQEVALGMPPHQGSPAPMMNDLLHMDTSDSVPRLQTDSSCSEHVLSPEIT 240

Query: 241 CDKEVQSVPKWNDLGNALNDDYNQFSFNYMDTNSFQDDPFGPQVQYQMDQLSPYQDLFMI 300
           CDKEVQS+PKWNDLGNALNDDYNQF+FNYMDTNSFQDDPFGPQVQYQMDQLSPYQDLFMI
Sbjct: 241 CDKEVQSMPKWNDLGNALNDDYNQFNFNYMDTNSFQDDPFGPQVQYQMDQLSPYQDLFMI 300

Query: 301 LQKPF 305
           LQKPF
Sbjct: 301 LQKPF 305

Source: Citrus sinensis

Species: Citrus sinensis

Genus: Citrus

Family: Rutaceae

Order: Sapindales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224081060|ref|XP_002306280.1| NAC domain protein, IPR003441 [Populus trichocarpa] gi|222855729|gb|EEE93276.1| NAC domain protein, IPR003441 [Populus trichocarpa]

 Score =  441 bits (1134), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 222/305 (72%), Positives = 249/305 (81%), Gaps = 13/305 (4%)

Query: 6   ELELPPGFRFHPTDEELVNHYLCRKCAGLPISVPIIAEIDLYKYDPWELPEMARYGEKEW 65
           +LELP GFRFHPTD+ELVNHYL +KC G  ISVPIIAEIDLYKYDPW+LPEMA YGEKEW
Sbjct: 11  QLELPAGFRFHPTDDELVNHYLIKKCGGQSISVPIIAEIDLYKYDPWQLPEMALYGEKEW 70

Query: 66  YFFSPRDRKYPNGSRPNRAAGSGYWKATGADKPIGKPKTLGIKKALVFYAGKAPKGIKTN 125
           YFFSPRDRKYPNGSRPNRAAG+GYWKATGADKPIG+PK LGIKKALVFYAGKAP+GIKTN
Sbjct: 71  YFFSPRDRKYPNGSRPNRAAGTGYWKATGADKPIGRPKPLGIKKALVFYAGKAPRGIKTN 130

Query: 126 WIMHEYRPANVHRSPATKNNLRLDDWVLCRLYNKKGRMEKHYPSDQKSIG-FPELEEDRK 184
           WIMHEYR ANV RS   KNNLRLDDWVLCR+YNKKG +EKH+P+D+KSI  + E+EE +K
Sbjct: 131 WIMHEYRLANVDRSAGKKNNLRLDDWVLCRIYNKKGSIEKHFPADRKSITKYAEMEE-QK 189

Query: 185 PNINISRQEVALGMPPHQGSPVPMM---NDLLNMDTSDSVPRLQTDSSCSEHVLSPEIAC 241
           PNIN        G     G+P  MM   NDLLNMDTSDS PRL TDSSCSE VLSPE+ C
Sbjct: 190 PNINEMSGYKNGG--STMGAPTMMMSNSNDLLNMDTSDSTPRLHTDSSCSEQVLSPELTC 247

Query: 242 DKEVQSVPK-WNDLGNALNDDYNQFSFNYMDTNSFQDDPFGPQVQYQMDQLSPYQDLFMI 300
           ++EVQS PK WND  ++  D    F+FNY+D + FQDDPF  QVQ+QMDQLSP QD+FM 
Sbjct: 248 EREVQSQPKSWNDQLDSAFD----FNFNYID-DGFQDDPFASQVQFQMDQLSPLQDMFMY 302

Query: 301 LQKPF 305
           LQ+P 
Sbjct: 303 LQRPL 307

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224093630|ref|XP_002309945.1| NAC domain protein, IPR003441 [Populus trichocarpa] gi|222852848|gb|EEE90395.1| NAC domain protein, IPR003441 [Populus trichocarpa]

 Score =  434 bits (1117), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 220/305 (72%), Positives = 248/305 (81%), Gaps = 14/305 (4%)

Query: 6   ELELPPGFRFHPTDEELVNHYLCRKCAGLPISVPIIAEIDLYKYDPWELPEMARYGEKEW 65
           +LELP GFRFHPTD+ELVNHYL +KC G  IS PIIAEIDLYKYDPW+LPEMA YGEKEW
Sbjct: 9   QLELPAGFRFHPTDDELVNHYLLKKCGGQSISAPIIAEIDLYKYDPWQLPEMALYGEKEW 68

Query: 66  YFFSPRDRKYPNGSRPNRAAGSGYWKATGADKPIGKPKTLGIKKALVFYAGKAPKGIKTN 125
           YFFSPRDRKYPNGSRPNRAAG+GYWKATGADKPIG+PK LGIKKALVFYAGKAPKGIKTN
Sbjct: 69  YFFSPRDRKYPNGSRPNRAAGTGYWKATGADKPIGRPKPLGIKKALVFYAGKAPKGIKTN 128

Query: 126 WIMHEYRPANVHRSPATKNNLRLDDWVLCRLYNKKGRMEKHYPSDQKSIG-FPELEEDRK 184
           WIMHEYR ANV R+   KNNLRLDDWVLCR+YNKKG +EKH+P+++KSI  +PE+EE +K
Sbjct: 129 WIMHEYRLANVDRTAGKKNNLRLDDWVLCRIYNKKGSVEKHFPAERKSIAKYPEMEE-QK 187

Query: 185 PNINISRQEVALGMPPHQGSPVPMM---NDLLNMDTSDSVPRLQTDSSCSEHVLSPEIAC 241
           PNI+        GM     +P  MM   ND L MDTSDS+PRL TDSS SEHVLSPE+ C
Sbjct: 188 PNIS-EMSGYHNGM-SQIAAPTMMMSNSNDFLYMDTSDSIPRLNTDSSSSEHVLSPEVTC 245

Query: 242 DKEVQSVPKWND-LGNALNDDYNQFSFNYMDTNSFQDDPFGPQVQYQMDQLSPYQDLFMI 300
           +KEVQS PKWND L NA +     F+FNY+D + FQD PF  Q Q+Q+DQLSP QD+FM 
Sbjct: 246 EKEVQSQPKWNDQLDNAFD-----FNFNYID-DGFQDYPFASQDQFQLDQLSPLQDMFMY 299

Query: 301 LQKPF 305
           LQKPF
Sbjct: 300 LQKPF 304

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255563837|ref|XP_002522919.1| NAC domain-containing protein, putative [Ricinus communis] gi|223537846|gb|EEF39462.1| NAC domain-containing protein, putative [Ricinus communis]

 Score =  434 bits (1117), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 229/315 (72%), Positives = 245/315 (77%), Gaps = 26/315 (8%)

Query: 2   MKGAELELPPGFRFHPTDEELVNHYLCRKCAGLPISVPIIAEIDLYKYDPWELPEMARYG 61
           MKGAEL+LP GFRFHPTD+ELVNHYLCRKCAG  ISVPIIAEIDLYK+DPW+LPEMA YG
Sbjct: 50  MKGAELDLPAGFRFHPTDDELVNHYLCRKCAGQSISVPIIAEIDLYKHDPWQLPEMALYG 109

Query: 62  EKEWYFFSPRDRKYPNGSRPNRAAGSGYWKATGADKPIGKPKTLGIKKALVFYAGKAPKG 121
           EKEWYFFSPRDRKYPNGSRPNRAAGSGYWKATGADKPIGKPK LGIKKALVFYAGKAPKG
Sbjct: 110 EKEWYFFSPRDRKYPNGSRPNRAAGSGYWKATGADKPIGKPKPLGIKKALVFYAGKAPKG 169

Query: 122 IKTNWIMHEYRPANVHRSPATKNNLRLDDWVLCRLYNKKGRMEKHYP-SDQKSIGFPELE 180
           IKTNWIMHEYR ANV RS   K NLRLDDWVLCR+YNKKG MEKH P SD+K + +PE E
Sbjct: 170 IKTNWIMHEYRLANVDRSAGKKTNLRLDDWVLCRVYNKKGSMEKHQPVSDRKLLKYPEAE 229

Query: 181 EDRKPNINISRQEVALGMPPHQGSPVPMMNDLLNMD-------TSDSVPRLQTDSSCS-E 232
           ED+KP+I I   +      P       +MND  N D       TSDSVPRL TDSSCS E
Sbjct: 230 EDQKPDILIYGDKAISTFGP------SIMNDSSNNDLLAHMDTTSDSVPRLHTDSSCSEE 283

Query: 233 HVLSPEIACDKEVQSVPKWNDL-GNALNDDYNQFSFNYMDTNSFQD-DPFGPQVQYQMDQ 290
           HVLSPE    KEVQS P WN L  NAL+     F FNY+    FQD DPF  QVQ+QMDQ
Sbjct: 284 HVLSPE----KEVQSEPNWNALDSNALD-----FGFNYLVDGGFQDYDPFASQVQFQMDQ 334

Query: 291 LSPYQDLFMILQKPF 305
           LSP QD+FM LQKPF
Sbjct: 335 LSPLQDMFMFLQKPF 349

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|171452372|dbj|BAG15877.1| nam-like protein [Bruguiera gymnorhiza]

 Score =  429 bits (1103), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 217/309 (70%), Positives = 248/309 (80%), Gaps = 18/309 (5%)

Query: 2   MKGAELELPPGFRFHPTDEELVNHYLCRKCAGLPISVPIIAEIDLYKYDPWELPEMARYG 61
           MKGAE+ELPPGFRFHPTDEELVNHYL RKC G PI+VPIIAEIDLYK+DPW+LPE A  G
Sbjct: 1   MKGAEIELPPGFRFHPTDEELVNHYLLRKCGGQPIAVPIIAEIDLYKFDPWQLPEKAVSG 60

Query: 62  EKEWYFFSPRDRKYPNGSRPNRAAGSGYWKATGADKPIGKPKTLGIKKALVFYAGKAPKG 121
           EKEWYFFSPRDRKYPNGSRPNRAAG+GYWKATGADKPIG+PK LGIKKALVFYAGKAP+G
Sbjct: 61  EKEWYFFSPRDRKYPNGSRPNRAAGTGYWKATGADKPIGRPKPLGIKKALVFYAGKAPRG 120

Query: 122 IKTNWIMHEYRPANVHRSPATKNNLRLDDWVLCRLYNKKGRMEKHYPSDQKSIGFPELEE 181
           IKTNWIMHEYR ANV RS     NLRLDDWVLCR+YNKKG +EK+  S  + + + E  E
Sbjct: 121 IKTNWIMHEYRLANVDRSAGKTKNLRLDDWVLCRIYNKKGSIEKY--SVDRKLNYSET-E 177

Query: 182 DRKPNINISRQEVALGMPPHQGSPVP----MMNDLLNMDTSDSVPRLQTDSSCSEHVLSP 237
           D+KP+I+++ Q    GM   Q SP+     M +DLL++DTSDS+PRL TDSSCSEHVLSP
Sbjct: 178 DQKPDISMASQN---GMALPQRSPLAPSSMMSSDLLHVDTSDSIPRLHTDSSCSEHVLSP 234

Query: 238 EIACDKEVQSVPKWN-DLGNALNDDYNQFSFNYMDTNSFQDDPFGPQVQYQMDQLSPYQD 296
           E+ C+KEVQS PKWN DL N+ +     F+  YMD  +FQDDPF  QVQYQMD LSP Q+
Sbjct: 235 EVTCEKEVQSEPKWNADLENSFD-----FNLGYMD--AFQDDPFASQVQYQMDYLSPSQE 287

Query: 297 LFMILQKPF 305
           +FM  QKP 
Sbjct: 288 MFMYWQKPL 296

Source: Bruguiera gymnorhiza

Species: Bruguiera gymnorhiza

Genus: Bruguiera

Family: Rhizophoraceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|21105734|gb|AAM34766.1|AF509866_1 nam-like protein 3 [Petunia x hybrida]

 Score =  408 bits (1049), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 209/322 (64%), Positives = 242/322 (75%), Gaps = 27/322 (8%)

Query: 1   MMKGA----ELELPPGFRFHPTDEELVNHYLCRKCAGLPISVPIIAEIDLYKYDPWELPE 56
           M+KG     +LELP GFRFHPTDEELV HYLC+KCAG PI V IIAEIDLYK+DPW+LPE
Sbjct: 1   MIKGVSGNQQLELPAGFRFHPTDEELVQHYLCQKCAGQPICVSIIAEIDLYKFDPWQLPE 60

Query: 57  MARYGEKEWYFFSPRDRKYPNGSRPNRAAGSGYWKATGADKPIGKPKTLGIKKALVFYAG 116
            A YGEKEWYFFSPRDRKYPNGSRPNRAAG+GYWKATGADKP+GKP+TLGIKKALVFYAG
Sbjct: 61  KALYGEKEWYFFSPRDRKYPNGSRPNRAAGTGYWKATGADKPVGKPRTLGIKKALVFYAG 120

Query: 117 KAPKGIKTNWIMHEYRPANVHRSPATKNNLRLDDWVLCRLYNKKGRMEKHYPSDQKS-IG 175
           KAP+GIKTNWIMHEYR ANV RS    NNLRLDDWVLCR+YNKKG +EKHY  D K  + 
Sbjct: 121 KAPRGIKTNWIMHEYRLANVDRSAGKSNNLRLDDWVLCRIYNKKGTLEKHYNVDNKEDVR 180

Query: 176 FPELEEDRKPNINI--SRQEVALGMPPHQGSPVPM---MNDLLNMDTSDSVPRLQT---D 227
           F E+EED+KPNI     R E+   + P    P P     +D  + +TSDSV R+ T    
Sbjct: 181 FEEVEEDQKPNILTFSQRNEMLTQLAPAPMPPRPQSMPASDYFHFETSDSVTRMHTTNSS 240

Query: 228 SSCSEHVLSPEIACDKEVQSVPKWNDLGNALNDDYNQFSFNYMDTNSFQDDPFGPQVQYQ 287
           S+CSEHVLS   +CDKEVQS P W DL +ALN     +  NY+D   FQD+PFGPQ+Q Q
Sbjct: 241 SNCSEHVLS---SCDKEVQSAPTWEDLESALN-----YQLNYLD--GFQDEPFGPQMQQQ 290

Query: 288 ----MDQLSPYQDLFMILQKPF 305
               +DQ +P+ D+FM +QKP+
Sbjct: 291 NCNIIDQFNPFHDMFMYMQKPY 312

Source: Petunia x hybrida

Species: Petunia x hybrida

Genus: Petunia

Family: Solanaceae

Order: Solanales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|154362215|gb|ABS80935.1| putative NAC transcription factor [Avicennia marina]

 Score =  405 bits (1041), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 207/312 (66%), Positives = 237/312 (75%), Gaps = 17/312 (5%)

Query: 2   MKGA--ELELPPGFRFHPTDEELVNHYLCRKCAGLPISVPIIAEIDLYKYDPWELPEMAR 59
           MKG   +L LP GFRFHPTDEELV HYLCRKCAG  I VP+IAEIDLYK+DPWELP++A 
Sbjct: 1   MKGGDQQLNLPAGFRFHPTDEELVVHYLCRKCAGQQIGVPVIAEIDLYKFDPWELPDLAL 60

Query: 60  YGEKEWYFFSPRDRKYPNGSRPNRAAGSGYWKATGADKPIGKPKTLGIKKALVFYAGKAP 119
           YGEKEWYFFSPRDRKYPNGSRPNRAAG+GYWKATGADKP+GKPKTLGIKKALVFYAGKAP
Sbjct: 61  YGEKEWYFFSPRDRKYPNGSRPNRAAGTGYWKATGADKPVGKPKTLGIKKALVFYAGKAP 120

Query: 120 KGIKTNWIMHEYRPANVHRSPATKNNLRLDDWVLCRLYNKKGRMEKHYPSDQKSIGFPEL 179
           +G+KTNWIMHEYR ANV RS     NLRLDDWVLCR+YNKKG +EKH   DQK + F + 
Sbjct: 121 RGVKTNWIMHEYRLANVDRSAGKTKNLRLDDWVLCRIYNKKGTLEKHLSVDQKEVQFSDS 180

Query: 180 EEDRKPNINI--SRQEVALGMPPHQGSPVPM----MNDLLNMDTSDSVPRLQTDSSCSEH 233
           EE +KP ++       V  G  P   +PV +    MND ++ D SDS P+L TDSS SEH
Sbjct: 181 EE-QKPEVDAFPFGDMVMPGPAPPVQAPVTLASQRMNDYMHFDASDSFPKLHTDSSSSEH 239

Query: 234 VLSPEIACDKEVQSVPKWNDLGNALNDDYNQFSFNYMDTNSFQDDPFGPQVQYQMDQLSP 293
           VLSPE  CDKEVQS PKW++L + L+     F   YMD   FQDDPFG Q+QY  DQLS 
Sbjct: 240 VLSPEFMCDKEVQSAPKWSELESTLD-----FPLIYMD--GFQDDPFGSQMQYG-DQLSL 291

Query: 294 YQDLFMILQKPF 305
           + D++  +QKPF
Sbjct: 292 FPDMYAYMQKPF 303

Source: Avicennia marina

Species: Avicennia marina

Genus: Avicennia

Family: Acanthaceae

Order: Lamiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|124021383|gb|ABM88941.1| NAC transcription factor [Cucumis melo]

 Score =  399 bits (1025), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 209/309 (67%), Positives = 236/309 (76%), Gaps = 20/309 (6%)

Query: 2   MKGAELELPPGFRFHPTDEELVNHYLCRKCAGLPISVPIIAEIDLYKYDPWELPEMARYG 61
           M  A LELPPGFRFHPTDEELV HYLCRKC+  PI+VPII EIDLYKYDPW LPE+A  G
Sbjct: 1   MTVAGLELPPGFRFHPTDEELVLHYLCRKCSSQPIAVPIIKEIDLYKYDPWHLPELAVCG 60

Query: 62  EKEWYFFSPRDRKYPNGSRPNRAAGSGYWKATGADKPIGKPKTLGIKKALVFYAGKAPKG 121
           EKEWYFFSPRDRKYPNGSRPNRAAG+GYWKATGADKPIG+PKTLGIKKALVFYAGKAP+G
Sbjct: 61  EKEWYFFSPRDRKYPNGSRPNRAAGTGYWKATGADKPIGRPKTLGIKKALVFYAGKAPRG 120

Query: 122 IKTNWIMHEYRPANVHRSPATK-NNLRLDDWVLCRLYNKKGRMEKHYPS-DQKSIGFPEL 179
           +KTNWIMHEYR ANV RS A K NNLRLDDWVLCR+YNKKG +EKHY S D K+  FP+ 
Sbjct: 121 VKTNWIMHEYRLANVDRSAANKTNNLRLDDWVLCRIYNKKGCIEKHYQSTDDKAAEFPDF 180

Query: 180 EEDRKPNINISRQEVALGMPPHQGSPVPMMNDLLNMDTSDSVPRLQTDSSC-SEHVLSPE 238
            ED KPNI  +     + +P H         + L M+TSDSVPR+QT+SS  S+ V SPE
Sbjct: 181 -EDEKPNITTNNM---VQLPLH---------NQLQMETSDSVPRMQTESSSGSDLVTSPE 227

Query: 239 IACDKEVQSVPKWNDLGN---ALNDDYNQFSFNYMDTNSF-QDDPFGPQVQYQMDQLSPY 294
           +  DKEVQS  KW   G    A   D++ F FNYMD+ S  +D PFG QVQ+QMD LSP 
Sbjct: 228 LTWDKEVQSQSKWEGEGGGERAAVADFDFFEFNYMDSFSMPEDVPFGSQVQFQMDHLSPL 287

Query: 295 QDLFMILQK 303
           QD+F  LQ+
Sbjct: 288 QDMFSYLQR 296

Source: Cucumis melo

Species: Cucumis melo

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356508929|ref|XP_003523205.1| PREDICTED: NAC domain-containing protein 2-like [Glycine max]

 Score =  398 bits (1023), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 204/309 (66%), Positives = 233/309 (75%), Gaps = 26/309 (8%)

Query: 2   MKGAELELPPGFRFHPTDEELVNHYLCRKCAGLPISVPIIAEIDLYKYDPWELPEMARYG 61
           MKG ELELPPGFRFHPTDEELVNHYLCRKCAG PI+VP+I E+DLYK+DPW+LPE+  YG
Sbjct: 1   MKG-ELELPPGFRFHPTDEELVNHYLCRKCAGQPIAVPVIKEVDLYKFDPWQLPEIGFYG 59

Query: 62  EKEWYFFSPRDRKYPNGSRPNRAAGSGYWKATGADKPIGKPKTLGIKKALVFYAGKAPKG 121
           EKEWYFFSPRDRKYPNGSRPNRAAGSGYWKATGADKPIGKPK LGIKKALVFYAGKAPKG
Sbjct: 60  EKEWYFFSPRDRKYPNGSRPNRAAGSGYWKATGADKPIGKPKALGIKKALVFYAGKAPKG 119

Query: 122 IKTNWIMHEYRPANVHRSPATK--NNLRLDDWVLCRLYNKKGRMEKHYPSDQK----SIG 175
           +KTNWIMHEYR ANV RS + K  NNLRLDDWVLCR+YNKKG++EK+     K     + 
Sbjct: 120 VKTNWIMHEYRLANVDRSASKKKNNNLRLDDWVLCRIYNKKGKIEKYNTGAAKMNVEMVH 179

Query: 176 FPELEEDRKPNINISRQEVALGMPPHQGSPVPMMNDLLNMDTSDSVPRLQTDSSCSEHVL 235
             E E + KP I+                   + N+ L M+TSDSVPRL TDSS SEHV+
Sbjct: 180 SFEHENETKPEIH------------------KLGNEQLYMETSDSVPRLNTDSSSSEHVV 221

Query: 236 SPEIACDKEVQSVPKWNDLGNALNDDYNQFSFNYMDTNSFQ-DDPFGPQVQYQMDQLSPY 294
           SP++ C++EVQS PKWND  +   ++   F FNY+D N+   DD     VQYQM QLSP 
Sbjct: 222 SPDVTCEREVQSDPKWNDDLDLKLENAFDFQFNYLDDNNLSVDDYLFGTVQYQMGQLSPL 281

Query: 295 QDLFMILQK 303
           QD+FM LQK
Sbjct: 282 QDMFMYLQK 290

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356512866|ref|XP_003525136.1| PREDICTED: NAC domain-containing protein 2 [Glycine max]

 Score =  397 bits (1020), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 206/312 (66%), Positives = 230/312 (73%), Gaps = 27/312 (8%)

Query: 5   AELELPPGFRFHPTDEELVNHYLCRKCAGLPISVPIIAEIDLYKYDPWELPEMARYGEKE 64
            EL+LPPGFRFHPTD+ELVNHYLCRKCA   I+VPII EIDLYK+DPW+LPEMA YGEKE
Sbjct: 3   GELQLPPGFRFHPTDDELVNHYLCRKCAAQTIAVPIIKEIDLYKFDPWQLPEMALYGEKE 62

Query: 65  WYFFSPRDRKYPNGSRPNRAAGSGYWKATGADKPIGKPKTLGIKKALVFYAGKAPKGIKT 124
           WYFFSPRDRKYPNGSRPNRAAGSGYWKATGADKPIGKPK LGIKKALVFYAGKAPKG+KT
Sbjct: 63  WYFFSPRDRKYPNGSRPNRAAGSGYWKATGADKPIGKPKALGIKKALVFYAGKAPKGVKT 122

Query: 125 NWIMHEYRPANVHRSPA----TKNNLRLDDWVLCRLYNKKGRMEKH---YPSDQKSIGFP 177
           NWIMHEYR ANV RS +    T NNLRLDDWVLCR+YNKKG++EK+      DQK     
Sbjct: 123 NWIMHEYRLANVDRSASKKNTTTNNLRLDDWVLCRIYNKKGKIEKYNGVAVVDQKVAKLS 182

Query: 178 E----LEEDRKPNINISRQEVALGMPPHQGSPVPMMNDLLNMDTSDSVPRLQTDSSCSEH 233
           E     + + KP I +   +                ND L MDTSDS PRL TDSSCSEH
Sbjct: 183 EEEVQFQHETKPQIKMYGHD-------------DFRNDQLYMDTSDSGPRLHTDSSCSEH 229

Query: 234 VLSPEIACDKEVQSVPKWNDLGNALNDDYNQFSFNYMDTNSFQDDPFGPQVQYQMDQLSP 293
           V+SP+  C+KEVQS PKWNDL     D    F FN+MD  S  DD F PQVQYQ++ LSP
Sbjct: 230 VVSPDGTCEKEVQSEPKWNDL-ELGPDPALGFDFNFMDLTS--DDAFAPQVQYQINHLSP 286

Query: 294 YQDLFMILQKPF 305
           +Q++F  L K F
Sbjct: 287 WQEMFTYLPKTF 298

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	305
TAIR|locus:2198225	289	ATAF1 [Arabidopsis thaliana (t	0.921	0.972	0.633	3.8e-94
TAIR|locus:2160634	312	NAC102 "NAC domain containing	0.547	0.535	0.847	7e-92
TAIR|locus:504956335	283	ATAF2 [Arabidopsis thaliana (t	0.6	0.646	0.784	4.9e-91
TAIR|locus:2204685	253	NAC032 "NAC domain containing	0.540	0.652	0.795	3.6e-76
TAIR|locus:2011531	317	NAC019 "NAC domain containing	0.511	0.492	0.679	1.1e-60
TAIR|locus:2090186	364	NAC2 "NAC domain containing pr	0.629	0.527	0.571	1.2e-58
TAIR|locus:2090176	317	NAC3 "NAC domain containing pr	0.514	0.495	0.680	5.1e-58
TAIR|locus:2011516	320	NAM "NO APICAL MERISTEM" [Arab	0.521	0.496	0.641	8.4e-58
TAIR|locus:2008490	323	NAC025 "NAC domain containing	0.495	0.467	0.685	1.6e-56
TAIR|locus:2124014	314	RD26 "RESPONSIVE TO DESICCATIO	0.324	0.315	0.728	7.8e-56

TAIR|locus:2198225 ATAF1 [Arabidopsis thaliana (taxid:3702)]

 Score = 937 (334.9 bits), Expect = 3.8e-94, P = 3.8e-94
 Identities = 192/303 (63%), Positives = 216/303 (71%)

Query:     7 LELPPGFRFHPTDEELVNHYLCRKCAGLPISVPIIAEIDLYKYDPWELPEMARYGEKEWY 66
             L+LPPGFRFHPTDEELV HYLCRKCA   I+VPIIAEIDLYKYDPWELP +A YGEKEWY
Sbjct:     5 LQLPPGFRFHPTDEELVMHYLCRKCASQSIAVPIIAEIDLYKYDPWELPGLALYGEKEWY 64

Query:    67 FFSPRDRKYPNGSRPNRAAGSGYWKATGADKPIGKPKTLGIKKALVFYAGKAPKGIKTNW 126
             FFSPRDRKYPNGSRPNR+AGSGYWKATGADKPIG PK +GIKKALVFYAGKAPKG KTNW
Sbjct:    65 FFSPRDRKYPNGSRPNRSAGSGYWKATGADKPIGLPKPVGIKKALVFYAGKAPKGEKTNW 124

Query:   127 IMHEYRPANVHRSPATK-NNLRLDDWVLCRLYNKKGRMEKHYPSDQKSIGFPELEEDRKP 185
             IMHEYR A+V RS   K N+LRLDDWVLCR+YNKKG  E+  P      G   +EE  KP
Sbjct:   125 IMHEYRLADVDRSVRKKKNSLRLDDWVLCRIYNKKGATERRGPPPPVVYGDEIMEE--KP 182

Query:   186 NINISRQEVALGMPPHQGSPVPMMNDLLNMDTSDSVPRLQT-DSSCSEHVLSPEIACDKE 244
              +     E+ +  PP Q S      +    DTSDSVP+L T DSSCSE V+SPE     E
Sbjct:   183 KVT----EMVMPPPPQQTS------EFAYFDTSDSVPKLHTTDSSCSEQVVSPEFT--SE 230

Query:   245 VQSVPKWNDLGNALNDDYN--QFSFNYMDTNSFQDDPFGPQVQYQMDQLSPYQDLFMILQ 302
             VQS PKW D     ND+ N   F FNY+D     D+ FG       +Q+ P QD+FM +Q
Sbjct:   231 VQSEPKWKDWSAVSNDNNNTLDFGFNYIDATV--DNAFGGGGS--SNQMFPLQDMFMYMQ 286

Query:   303 KPF 305
             KP+
Sbjct:   287 KPY 289

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0009611 "response to wounding" evidence=IEP;RCA

GO:0009788 "negative regulation of abscisic acid mediated signaling pathway" evidence=IMP

GO:0009414 "response to water deprivation" evidence=RCA

GO:0009620 "response to fungus" evidence=RCA

GO:0009695 "jasmonic acid biosynthetic process" evidence=RCA

GO:0009737 "response to abscisic acid stimulus" evidence=RCA

GO:0009753 "response to jasmonic acid stimulus" evidence=RCA

GO:0010200 "response to chitin" evidence=RCA

GO:0042538 "hyperosmotic salinity response" evidence=RCA

TAIR|locus:2160634 NAC102 "NAC domain containing protein 102" [Arabidopsis thaliana (taxid:3702)]

 Score = 782 (280.3 bits), Expect = 7.0e-92, Sum P(2) = 7.0e-92
 Identities = 144/170 (84%), Positives = 154/170 (90%)

Query:     2 MKGAELELPPGFRFHPTDEELVNHYLCRKCAGLPISVPIIAEIDLYKYDPWELPEMARYG 61
             MK AEL LP GFRFHPTDEELV  YLCR+CA  PI+VP+IAEIDLYK++PWELPEMA YG
Sbjct:    44 MK-AELNLPAGFRFHPTDEELVKFYLCRRCASEPINVPVIAEIDLYKFNPWELPEMALYG 102

Query:    62 EKEWYFFSPRDRKYPNGSRPNRAAGSGYWKATGADKPIGKPKTLGIKKALVFYAGKAPKG 121
             EKEWYFFS RDRKYPNGSRPNRAAG+GYWKATGADKPIGKPKTLGIKKALVFYAGKAPKG
Sbjct:   103 EKEWYFFSHRDRKYPNGSRPNRAAGTGYWKATGADKPIGKPKTLGIKKALVFYAGKAPKG 162

Query:   122 IKTNWIMHEYRPANVHRSPAT--KNNLRLDDWVLCRLYNKKGRMEKHYPS 169
             IKTNWIMHEYR ANV RS +T  KNNLRLDDWVLCR+YNKKG MEK+ P+
Sbjct:   163 IKTNWIMHEYRLANVDRSASTNKKNNLRLDDWVLCRIYNKKGTMEKYLPA 212

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0001666 "response to hypoxia" evidence=IMP

GO:0009507 "chloroplast" evidence=IDA

GO:0005515 "protein binding" evidence=IPI

GO:0030968 "endoplasmic reticulum unfolded protein response" evidence=RCA

TAIR|locus:504956335 ATAF2 [Arabidopsis thaliana (taxid:3702)]

 Score = 792 (283.9 bits), Expect = 4.9e-91, Sum P(2) = 4.9e-91
 Identities = 146/186 (78%), Positives = 159/186 (85%)

Query:     2 MKGAELELPPGFRFHPTDEELVNHYLCRKCAGLPISVPIIAEIDLYKYDPWELPEMARYG 61
             MK +EL LP GFRFHPTDEELV  YLCRKCA   IS P+IAEIDLYK++PWELPEM+ YG
Sbjct:     1 MK-SELNLPAGFRFHPTDEELVKFYLCRKCASEQISAPVIAEIDLYKFNPWELPEMSLYG 59

Query:    62 EKEWYFFSPRDRKYPNGSRPNRAAGSGYWKATGADKPIGKPKTLGIKKALVFYAGKAPKG 121
             EKEWYFFSPRDRKYPNGSRPNRAAG+GYWKATGADKPIGKPKTLGIKKALVFYAGKAPKG
Sbjct:    60 EKEWYFFSPRDRKYPNGSRPNRAAGTGYWKATGADKPIGKPKTLGIKKALVFYAGKAPKG 119

Query:   122 IKTNWIMHEYRPANVHRSPAT--KNNLRLDDWVLCRLYNKKGRMEKHYPSDQKSIGFPEL 179
             IKTNWIMHEYR ANV RS +   KNNLRLDDWVLCR+YNKKG MEK++P+D+K       
Sbjct:   120 IKTNWIMHEYRLANVDRSASVNKKNNLRLDDWVLCRIYNKKGTMEKYFPADEKPRTTTMA 179

Query:   180 EEDRKP 185
             E+   P
Sbjct:   180 EQSSSP 185

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM;IDA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0009611 "response to wounding" evidence=IEP

GO:0008361 "regulation of cell size" evidence=IMP

GO:0009416 "response to light stimulus" evidence=IEP

GO:0009620 "response to fungus" evidence=IMP

GO:0009744 "response to sucrose stimulus" evidence=IEP

GO:0009751 "response to salicylic acid stimulus" evidence=IEP

GO:0009753 "response to jasmonic acid stimulus" evidence=IEP

GO:0043424 "protein histidine kinase binding" evidence=IPI

TAIR|locus:2204685 NAC032 "NAC domain containing protein 32" [Arabidopsis thaliana (taxid:3702)]

 Score = 739 (265.2 bits), Expect = 3.6e-76, Sum P(2) = 3.6e-76
 Identities = 132/166 (79%), Positives = 146/166 (87%)

Query:     1 MMK-GAELELPPGFRFHPTDEELVNHYLCRKCAGLPISVPIIAEIDLYKYDPWELPEMAR 59
             MMK GA+L+ PPGFRFHPTDEELV  YLCRKCA  PI  PII E+DLY+YDPW+LP+MA 
Sbjct:     1 MMKSGADLQFPPGFRFHPTDEELVLMYLCRKCASQPIPAPIITELDLYRYDPWDLPDMAL 60

Query:    60 YGEKEWYFFSPRDRKYPNGSRPNRAAGSGYWKATGADKPIGKPKTLGIKKALVFYAGKAP 119
             YGEKEWYFFSPRDRKYPNGSRPNRAAG+GYWKATGADKPIG+PK +GIKKALVFY+GK P
Sbjct:    61 YGEKEWYFFSPRDRKYPNGSRPNRAAGTGYWKATGADKPIGRPKPVGIKKALVFYSGKPP 120

Query:   120 KGIKTNWIMHEYRPANVHRSPATKNNLRLDDWVLCRLYNKKGRMEK 165
              G KTNWIMHEYR A+V RS   KN+LRLDDWVLCR+YNKKG +EK
Sbjct:   121 NGEKTNWIMHEYRLADVDRSVRKKNSLRLDDWVLCRIYNKKGVIEK 166

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM;IDA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0009407 "toxin catabolic process" evidence=RCA

GO:0010583 "response to cyclopentenone" evidence=RCA

TAIR|locus:2011531 NAC019 "NAC domain containing protein 19" [Arabidopsis thaliana (taxid:3702)]

 Score = 594 (214.2 bits), Expect = 1.1e-60, Sum P(2) = 1.1e-60
 Identities = 110/162 (67%), Positives = 127/162 (78%)

Query:     6 ELELPPGFRFHPTDEELVNHYLCRKCAGLPISVPIIAEIDLYKYDPWELPEMARYGEKEW 65
             +L LPPGFRF+PTDEEL+  YLCRK AG   S+ +IAEIDLYK+DPW LP  A +GEKEW
Sbjct:    11 QLSLPPGFRFYPTDEELMVQYLCRKAAGYDFSLQLIAEIDLYKFDPWVLPNKALFGEKEW 70

Query:    66 YFFSPRDRKYPNGSRPNRAAGSGYWKATGADKPIG-KPKTLGIKKALVFYAGKAPKGIKT 124
             YFFSPRDRKYPNGSRPNR AGSGYWKATG DK I  + + +GIKKALVFY GKAPKG KT
Sbjct:    71 YFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKIISTEGQRVGIKKALVFYIGKAPKGTKT 130

Query:   125 NWIMHEYRPANVHRSPATKN-NLRLDDWVLCRLYNKKGRMEK 165
             NWIMHEYR       P+ +N + +LDDWVLCR+Y K+   +K
Sbjct:   131 NWIMHEYRLIE----PSRRNGSTKLDDWVLCRIYKKQSSAQK 168

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS;IDA

GO:0005515 "protein binding" evidence=IPI

GO:0009414 "response to water deprivation" evidence=RCA;IMP

GO:0006612 "protein targeting to membrane" evidence=RCA

GO:0007165 "signal transduction" evidence=RCA

GO:0009409 "response to cold" evidence=RCA

GO:0009611 "response to wounding" evidence=RCA

GO:0009723 "response to ethylene stimulus" evidence=RCA

GO:0009733 "response to auxin stimulus" evidence=RCA

GO:0009737 "response to abscisic acid stimulus" evidence=RCA

GO:0009738 "abscisic acid mediated signaling pathway" evidence=RCA

GO:0009753 "response to jasmonic acid stimulus" evidence=RCA

GO:0009863 "salicylic acid mediated signaling pathway" evidence=RCA

GO:0009867 "jasmonic acid mediated signaling pathway" evidence=RCA

GO:0010286 "heat acclimation" evidence=RCA

GO:0010363 "regulation of plant-type hypersensitive response" evidence=RCA

GO:0042538 "hyperosmotic salinity response" evidence=RCA

TAIR|locus:2090186 NAC2 "NAC domain containing protein 2" [Arabidopsis thaliana (taxid:3702)]

 Score = 602 (217.0 bits), Expect = 1.2e-58, P = 1.2e-58
 Identities = 120/210 (57%), Positives = 144/210 (68%)

Query:     9 LPPGFRFHPTDEELVNHYLCRKCAGLPISVPIIAEIDLYKYDPWELPEMARYGEKEWYFF 68
             LPPGFRFHPTDEELV HYL RK A  P+ V IIAE+DLYK+DPWELP  A +GE+EWYFF
Sbjct:    17 LPPGFRFHPTDEELVVHYLKRKAASAPLPVAIIAEVDLYKFDPWELPAKASFGEQEWYFF 76

Query:    69 SPRDRKYPNGSRPNRAAGSGYWKATGADKPI----GKPKTLGIKKALVFYAGKAPKGIKT 124
             SPRDRKYPNG+RPNRAA SGYWKATG DKP+    G  K +G+KKALVFY+GK PKG+K+
Sbjct:    77 SPRDRKYPNGARPNRAATSGYWKATGTDKPVLASDGNQK-VGVKKALVFYSGKPPKGVKS 135

Query:   125 NWIMHEYR-----PANVHRSPAT-----KNNLRLDDWVLCRLYNKKGRMEKHYPSDQKSI 174
             +WIMHEYR     P N  R P       KN+LRLDDWVLCR+Y KK    +H  +D+   
Sbjct:   136 DWIMHEYRLIENKPNN--RPPGCDFGNKKNSLRLDDWVLCRIY-KKNNASRHVDNDKDHD 192

Query:   175 GFPELEEDRKPNINISRQEVALGMPPHQGS 204
                 +     P+++++     L    H  S
Sbjct:   193 MIDYIFRKIPPSLSMAAASTGLHQHHHNVS 222

GO:0003677 "DNA binding" evidence=IEA

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS;NAS

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

TAIR|locus:2090176 NAC3 "NAC domain containing protein 3" [Arabidopsis thaliana (taxid:3702)]

 Score = 596 (214.9 bits), Expect = 5.1e-58, P = 5.1e-58
 Identities = 111/163 (68%), Positives = 128/163 (78%)

Query:     5 AELELPPGFRFHPTDEELVNHYLCRKCAGLPISVPIIAEIDLYKYDPWELPEMARYGEKE 64
             A+L LPPGFRF+PTDEEL+  YLCRK AG   S+ +IAEIDLYK+DPW LP  A +GEKE
Sbjct:    10 AQLSLPPGFRFYPTDEELMVEYLCRKAAGHDFSLQLIAEIDLYKFDPWVLPSKALFGEKE 69

Query:    65 WYFFSPRDRKYPNGSRPNRAAGSGYWKATGADKPIG-KPKTLGIKKALVFYAGKAPKGIK 123
             WYFFSPRDRKYPNGSRPNR AGSGYWKATG DK I  + + +GIKKALVFY GKAPKG K
Sbjct:    70 WYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKVISTEGRRVGIKKALVFYIGKAPKGTK 129

Query:   124 TNWIMHEYRPANVHRSPATKN-NLRLDDWVLCRLYNKKGRMEK 165
             TNWIMHEYR       P+ +N + +LDDWVLCR+Y K+   +K
Sbjct:   130 TNWIMHEYRLIE----PSRRNGSTKLDDWVLCRIYKKQTSAQK 168

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS;IDA

GO:0009867 "jasmonic acid mediated signaling pathway" evidence=RCA;TAS

GO:0009414 "response to water deprivation" evidence=RCA;IMP

GO:0005515 "protein binding" evidence=IPI

GO:0000165 "MAPK cascade" evidence=RCA

GO:0006612 "protein targeting to membrane" evidence=RCA

GO:0007154 "cell communication" evidence=RCA

GO:0007165 "signal transduction" evidence=RCA

GO:0009409 "response to cold" evidence=RCA

GO:0009611 "response to wounding" evidence=RCA

GO:0009695 "jasmonic acid biosynthetic process" evidence=RCA

GO:0009723 "response to ethylene stimulus" evidence=RCA

GO:0009733 "response to auxin stimulus" evidence=RCA

GO:0009737 "response to abscisic acid stimulus" evidence=RCA

GO:0009738 "abscisic acid mediated signaling pathway" evidence=RCA

GO:0009753 "response to jasmonic acid stimulus" evidence=RCA

GO:0009862 "systemic acquired resistance, salicylic acid mediated signaling pathway" evidence=RCA

GO:0009863 "salicylic acid mediated signaling pathway" evidence=RCA

GO:0010363 "regulation of plant-type hypersensitive response" evidence=RCA

GO:0030968 "endoplasmic reticulum unfolded protein response" evidence=RCA

GO:0031348 "negative regulation of defense response" evidence=RCA

GO:0042538 "hyperosmotic salinity response" evidence=RCA

GO:0043069 "negative regulation of programmed cell death" evidence=RCA

GO:0050832 "defense response to fungus" evidence=RCA

TAIR|locus:2011516 NAM "NO APICAL MERISTEM" [Arabidopsis thaliana (taxid:3702)]

 Score = 594 (214.2 bits), Expect = 8.4e-58, P = 8.4e-58
 Identities = 109/170 (64%), Positives = 130/170 (76%)

Query:     9 LPPGFRFHPTDEELVNHYLCRKCAGLPISVPIIAEIDLYKYDPWELPEMARYGEKEWYFF 68
             LPPGFRFHPTDEELV HYL RK   +P+ V IIA++DLYK+DPWELP  A +GE+EWYFF
Sbjct:    17 LPPGFRFHPTDEELVIHYLKRKADSVPLPVAIIADVDLYKFDPWELPAKASFGEQEWYFF 76

Query:    69 SPRDRKYPNGSRPNRAAGSGYWKATGADKPI-----GKPKTLGIKKALVFYAGKAPKGIK 123
             SPRDRKYPNG+RPNRAA SGYWKATG DKP+     G  K +G+KKALVFY+GK PKG+K
Sbjct:    77 SPRDRKYPNGARPNRAATSGYWKATGTDKPVISTGGGGSKKVGVKKALVFYSGKPPKGVK 136

Query:   124 TNWIMHEYR-----PANVHRSPATKNNLRLDDWVLCRLYNKKGRM-EKHY 167
             ++WIMHEYR     P ++      KN+LRLDDWVLCR+Y K      +H+
Sbjct:   137 SDWIMHEYRLTDNKPTHICDFGNKKNSLRLDDWVLCRIYKKNNSTASRHH 186

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS;IDA

TAIR|locus:2008490 NAC025 "NAC domain containing protein 25" [Arabidopsis thaliana (taxid:3702)]

 Score = 582 (209.9 bits), Expect = 1.6e-56, P = 1.6e-56
 Identities = 111/162 (68%), Positives = 124/162 (76%)

Query:     9 LPPGFRFHPTDEELVNHYLCRKCAGLPISVPIIAEIDLYKYDPWELPEMARYGEKEWYFF 68
             LPPGFRFHPTDEELV HYL +K   +P+ V IIAEIDLYK+DPWELP  A +GE EWYFF
Sbjct:    16 LPPGFRFHPTDEELVVHYLKKKADSVPLPVSIIAEIDLYKFDPWELPSKASFGEHEWYFF 75

Query:    69 SPRDRKYPNGSRPNRAAGSGYWKATGADKPIGKPKT--LGIKKALVFYAGKAPKGIKTNW 126
             SPRDRKYPNG RPNRAA SGYWKATG DKPI    +  +G+KKALVFY GK PKGIKT+W
Sbjct:    76 SPRDRKYPNGVRPNRAATSGYWKATGTDKPIFTCNSHKVGVKKALVFYGGKPPKGIKTDW 135

Query:   127 IMHEYRPANVHRSPATK---------NNLRLDDWVLCRLYNK 159
             IMHEYR  + + S A K         N+LRLDDWVLCR+Y K
Sbjct:   136 IMHEYRLTDGNLSTAAKPPDLTTTRKNSLRLDDWVLCRIYKK 177

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

TAIR|locus:2124014 RD26 "RESPONSIVE TO DESICCATION 26" [Arabidopsis thaliana (taxid:3702)]

 Score = 395 (144.1 bits), Expect = 7.8e-56, Sum P(2) = 7.8e-56
 Identities = 75/103 (72%), Positives = 81/103 (78%)

Query:    58 ARYGEKEWYFFSPRDRKYPNGSRPNRAAGSGYWKATGADKPI-GKPKTLGIKKALVFYAG 116
             A +GEKEWYFFSPRDRKYPNGSRPNR AGSGYWKATG DK I    + +GIKKALVFYAG
Sbjct:    80 ALFGEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKIITADGRRVGIKKALVFYAG 139

Query:   117 KAPKGIKTNWIMHEYRPANVHRSPATKNNLRLDDWVLCRLYNK 159
             KAPKG KTNWIMHEYR     RS  +    +LDDWVLCR+Y K
Sbjct:   140 KAPKGTKTNWIMHEYRLIEHSRSHGSS---KLDDWVLCRIYKK 179

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM;IDA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS;IDA

GO:0009414 "response to water deprivation" evidence=RCA;IMP

GO:0009737 "response to abscisic acid stimulus" evidence=RCA;IMP

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=IDA

GO:0007165 "signal transduction" evidence=RCA

GO:0009409 "response to cold" evidence=RCA

GO:0009611 "response to wounding" evidence=RCA

GO:0009723 "response to ethylene stimulus" evidence=RCA

GO:0009733 "response to auxin stimulus" evidence=RCA

GO:0009738 "abscisic acid mediated signaling pathway" evidence=RCA

GO:0009753 "response to jasmonic acid stimulus" evidence=RCA

GO:0042538 "hyperosmotic salinity response" evidence=RCA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q39013	NAC2_ARATH	No assigned EC number	0.6336	0.9213	0.9723	yes	no
Q7F2L3	NAC48_ORYSJ	No assigned EC number	0.6796	0.8032	0.8085	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: NAC043 NAC domain protein, IPR003441 (307 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	305
pfam02365	130	pfam02365, NAM, No apical meristem (NAM) protein	6e-79

>gnl|CDD|216997 pfam02365, NAM, No apical meristem (NAM) protein

 Score =  235 bits (602), Expect = 6e-79
 Identities = 83/128 (64%), Positives = 102/128 (79%), Gaps = 4/128 (3%)

Query: 9   LPPGFRFHPTDEELVNHYLCRKCAGLPISVP-IIAEIDLYKYDPWELPEMARYG-EKEWY 66
           LPPGFRFHPTDEELV +YL RK  G P+ +  +I E+D+YK++PW+LP+    G ++EWY
Sbjct: 1   LPPGFRFHPTDEELVVYYLKRKVLGKPLPLLDVIPEVDIYKFEPWDLPDGKAKGGDREWY 60

Query: 67  FFSPRDRKYPNGSRPNRAAGSGYWKATGADKPI--GKPKTLGIKKALVFYAGKAPKGIKT 124
           FFSPRDRKYPNGSR NRA GSGYWKATG DKP+     + +G+KK LVFY G+APKG KT
Sbjct: 61  FFSPRDRKYPNGSRTNRATGSGYWKATGKDKPVLSKGGEVVGMKKTLVFYKGRAPKGEKT 120

Query: 125 NWIMHEYR 132
           +W+MHEYR
Sbjct: 121 DWVMHEYR 128

This is a family of no apical meristem (NAM) proteins these are plant development proteins. Mutations in NAM result in the failure to develop a shoot apical meristem in petunia embryos. NAM is indicated as having a role in determining positions of meristems and primordial. One member of this family NAP (NAC-like, activated by AP3/PI) is encoded by the target genes of the AP3/PI transcriptional activators and functions in the transition between growth by cell division and cell expansion in stamens and petals. Length = 130

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	305
PF02365	129	NAM: No apical meristem (NAM) protein; InterPro: I	100.0

>PF02365 NAM: No apical meristem (NAM) protein; InterPro: IPR003441 The NAC domain (for Petunia hybrida (Petunia) NAM and for Arabidopsis ATAF1, ATAF2, and CUC2) is an N-terminal module of ~160 amino acids, which is found in proteins of the NAC family of plant-specific transcriptional regulators (no apical meristem (NAM) proteins) []

Probab=100.00  E-value=3.9e-43  Score=293.74  Aligned_cols=126  Identities=60%  Similarity=1.206  Sum_probs=95.9

Q ss_pred             CCCceeeCCChHHHHHHHHHHhhcCCCCCC-CceeeccCCCCCCCCCccccccCCeeEEEecccCCCCCCCCCCceecCC
Q 021910            9 LPPGFRFHPTDEELVNHYLCRKCAGLPISV-PIIAEIDLYKYDPWELPEMARYGEKEWYFFSPRDRKYPNGSRPNRAAGS   87 (305)
Q Consensus         9 LPpGfRF~PTDeELV~~YL~~Ki~G~pl~~-~iI~evDVY~~ePwdLP~~~~~ge~eWYFFspr~rk~~~G~R~~RaaGg   87 (305)
                      |||||||+|||+|||.+||++|+.|.+++. .+|+++|||++|||+||+....++++||||+++++++.+|+|.+|++++
T Consensus         1 LP~G~rF~PtD~ELi~~yL~~k~~g~~~~~~~~i~~~Diy~~~P~~L~~~~~~~~~~~yFF~~~~~~~~~~~r~~R~~~~   80 (129)
T PF02365_consen    1 LPPGFRFRPTDEELINHYLRPKILGEPLPCEDVIHDVDIYSAHPWELPAKFKGGDEEWYFFSPRKKKYPNGGRPNRVTGG   80 (129)
T ss_dssp             --TTEEE---HHHHHHCTHHHHHTT-HHCS-CHSEE--GGGS-GGGCHHHSSS-SSEEEEEEE----------S-EEETT
T ss_pred             CCCceEecCChHHHHHHHHHHHhcCCCCCcccceeecccCccChHHhhhhccCCCceEEEEEecccccCCcccccccccc
Confidence            899999999999999999999999999888 7999999999999999954444677999999999999999999999999


Q ss_pred             CeEEecccccccC--CCcceeEEEEEEeecCCCCCCCccCeEEEEEeeC
Q 021910           88 GYWKATGADKPIG--KPKTLGIKKALVFYAGKAPKGIKTNWIMHEYRPA  134 (305)
Q Consensus        88 G~WK~tG~~k~V~--~gk~vG~KktL~Fy~gk~p~g~KT~WiMhEY~L~  134 (305)
                      |+||.+|+.++|.  ++++||+|++|+||.++.+++.+|+|+||||+|.
T Consensus        81 G~Wk~~g~~~~i~~~~g~~iG~k~~l~f~~~~~~~~~kt~W~M~EY~L~  129 (129)
T PF02365_consen   81 GYWKSTGKEKPIKDPGGKVIGFKKTLVFYSGKSPNGKKTGWVMHEYSLE  129 (129)
T ss_dssp             EEEEEECEEEEEEE-TTCEEEEEEEEEEEESSTTS-EEEEEEEEEEEE-
T ss_pred             eEEeecccccccccccceeeeeEEEEEEEeccCCCCCcCCeEEEEEEeC
Confidence            9999999999985  5899999999999998888899999999999983

NAC proteins are involved in developmental processes, including formation of the shoot apical meristem, floral organs and lateral shoots, as well as in plant hormonal control and defence. The NAC domain is accompanied by diverse C-terminal transcriptional activation domains. The NAC domain has been shown to be a DNA-binding domain (DBD) and a dimerization domain [,]. The NAC domain can be subdivided into five subdomains (A-E). Each subdomain is distinguishable by blocks of heterogeneous amino acids or gaps. While the NAC domains were rich in basic amino acids (R, K and H) as a whole, the distribution of positive and negative amino acids in each subdomain were unequal. Subdomains C and D are rich in basic amino acids but poor in acidic amino acids, while subdomain B contains a high proportion of acidic amino acids. Putative nuclear localization signals (NLS) have been detected in subdomains C and D []. The DBD is contained within a 60 amino acid region located within subdomains D and E []. The overall structure of the NAC domain monomer consists of a very twisted antiparallel beta-sheet, which packs against an N-terminal alpha-helix on one side and one shorter helix on the other side surrounded by a few helical elements. The structure suggests that the NAC domain mediates dimerization through conserved interactions including a salt bridge, and DNA binding through the NAC dimer face rich in positive charges [].; GO: 0003677 DNA binding, 0006355 regulation of transcription, DNA-dependent; PDB: 1UT4_A 3SWM_B 4DUL_B 3SWP_D 1UT7_B 3ULX_A.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	305
3ulx_A	174	Crystal Structural Of The Conserved Domain Of Rice		2e-66
1ut4_A	171	Structure Of The Conserved Domain Of Anac, A Member		6e-60
3swm_A	174	The Nac Domain Of Anac019 In Complex With Dna, Gold		7e-60

>pdb|3ULX|A Chain A, Crystal Structural Of The Conserved Domain Of Rice Stress-Responsive Nac1 Length = 174

Iteration: 1
 Score =  249 bits (636), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 122/164 (74%), Positives = 139/164 (84%), Gaps = 3/164 (1%)
Query: 5   AELELPPGFRFHPTDEELVNHYLCRKCAGLPISVPIIAEIDLYKYDPWELPEMARYGEKE 64
           AEL LPPGFRFHPTD+ELV HYLCRK AG  + VPIIAE+DLYK+DPW+LPE A +G +E
Sbjct: 11  AELNLPPGFRFHPTDDELVEHYLCRKAAGQRLPVPIIAEVDLYKFDPWDLPERALFGARE 70
Query: 65  WYFFSPRDRKYPNGSRPNRAAGSGYWKATGADKPIG-KPKTLGIKKALVFYAGKAPKGIK 123
           WYFF+PRDRKYPNGSRPNRAAG+GYWKATGADKP+  + +TLGIKKALVFYAGKAP+G+K
Sbjct: 71  WYFFTPRDRKYPNGSRPNRAAGNGYWKATGADKPVAPRGRTLGIKKALVFYAGKAPRGVK 130
Query: 124 TNWIMHEYR--PANVHRSPATKNNLRLDDWVLCRLYNKKGRMEK 165
           T+WIMHEYR   A    + A K +LRLDDWVLCRLYNKK   EK
Sbjct: 131 TDWIMHEYRLADAGRAAAGAKKGSLRLDDWVLCRLYNKKNEWEK 174

>pdb|1UT4|A Chain A, Structure Of The Conserved Domain Of Anac, A Member Of The Nac Family Of Transcription Factors Length = 171

Iteration: 1
 Score =  227 bits (579), Expect = 6e-60,   Method: Compositional matrix adjust.
 Identities = 110/163 (67%), Positives = 127/163 (77%), Gaps = 6/163 (3%)
Query: 5   AELELPPGFRFHPTDEELVNHYLCRKCAGLPISVPIIAEIDLYKYDPWELPEMARYGEKE 64
            +L LPPGFRF+PTDEEL+  YLCRK AG   S+ +IAEIDLYK+DPW LP  A +GEKE
Sbjct: 13  TQLSLPPGFRFYPTDEELMVQYLCRKAAGYDFSLQLIAEIDLYKFDPWVLPNKALFGEKE 72
Query: 65  WYFFSPRDRKYPNGSRPNRAAGSGYWKATGADKPIG-KPKTLGIKKALVFYAGKAPKGIK 123
           WYFFSPRDRKYPNGSRPNR AGSGYWKATG DK I  + + +GIKKALVFY GKAPKG K
Sbjct: 73  WYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKIISTEGQRVGIKKALVFYIGKAPKGTK 132
Query: 124 TNWIMHEYRPANVHRSPATKN-NLRLDDWVLCRLYNKKGRMEK 165
           TNWIMHEYR       P+ +N + +LDDWVLCR+Y K+   +K
Sbjct: 133 TNWIMHEYRLIE----PSRRNGSTKLDDWVLCRIYKKQSSAQK 171

>pdb|3SWM|A Chain A, The Nac Domain Of Anac019 In Complex With Dna, Gold Derivative Length = 174

Iteration: 1
 Score =  227 bits (578), Expect = 7e-60,   Method: Compositional matrix adjust.
 Identities = 110/163 (67%), Positives = 127/163 (77%), Gaps = 6/163 (3%)
Query: 5   AELELPPGFRFHPTDEELVNHYLCRKCAGLPISVPIIAEIDLYKYDPWELPEMARYGEKE 64
            +L LPPGFRF+PTDEEL+  YLCRK AG   S+ +IAEIDLYK+DPW LP  A +GEKE
Sbjct: 16  TQLSLPPGFRFYPTDEELMVQYLCRKAAGYDFSLQLIAEIDLYKFDPWVLPNKALFGEKE 75
Query: 65  WYFFSPRDRKYPNGSRPNRAAGSGYWKATGADKPIG-KPKTLGIKKALVFYAGKAPKGIK 123
           WYFFSPRDRKYPNGSRPNR AGSGYWKATG DK I  + + +GIKKALVFY GKAPKG K
Sbjct: 76  WYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKIISTEGQRVGIKKALVFYIGKAPKGTK 135
Query: 124 TNWIMHEYRPANVHRSPATKN-NLRLDDWVLCRLYNKKGRMEK 165
           TNWIMHEYR       P+ +N + +LDDWVLCR+Y K+   +K
Sbjct: 136 TNWIMHEYRLIE----PSRRNGSTKLDDWVLCRIYKKQSSAQK 174

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	305
3ulx_A	174	Stress-induced transcription factor NAC1; NAC fami	1e-105
1ut7_A	171	No apical meristem protein; transcription regulati	1e-105

>3ulx_A Stress-induced transcription factor NAC1; NAC family, stress-responsive, DNA binding protein; 2.60A {Oryza sativa subsp} Length = 174

 Score =  304 bits (780), Expect = e-105
 Identities = 122/168 (72%), Positives = 139/168 (82%), Gaps = 3/168 (1%)

Query: 1   MMKGAELELPPGFRFHPTDEELVNHYLCRKCAGLPISVPIIAEIDLYKYDPWELPEMARY 60
               AEL LPPGFRFHPTD+ELV HYLCRK AG  + VPIIAE+DLYK+DPW+LPE A +
Sbjct: 7   RDAEAELNLPPGFRFHPTDDELVEHYLCRKAAGQRLPVPIIAEVDLYKFDPWDLPERALF 66

Query: 61  GEKEWYFFSPRDRKYPNGSRPNRAAGSGYWKATGADKPI-GKPKTLGIKKALVFYAGKAP 119
           G +EWYFF+PRDRKYPNGSRPNRAAG+GYWKATGADKP+  + +TLGIKKALVFYAGKAP
Sbjct: 67  GAREWYFFTPRDRKYPNGSRPNRAAGNGYWKATGADKPVAPRGRTLGIKKALVFYAGKAP 126

Query: 120 KGIKTNWIMHEYR--PANVHRSPATKNNLRLDDWVLCRLYNKKGRMEK 165
           +G+KT+WIMHEYR   A    + A K +LRLDDWVLCRLYNKK   EK
Sbjct: 127 RGVKTDWIMHEYRLADAGRAAAGAKKGSLRLDDWVLCRLYNKKNEWEK 174

>1ut7_A No apical meristem protein; transcription regulation, transcription, transcription factor, DNA binding, abscisic acid response, NAC domain; 1.9A {Arabidopsis thaliana} SCOP: b.143.1.1 PDB: 1ut4_A 4dul_A 3swp_A 3swm_A Length = 171

 Score =  302 bits (776), Expect = e-105
 Identities = 109/166 (65%), Positives = 124/166 (74%), Gaps = 4/166 (2%)

Query: 1   MMKGAELELPPGFRFHPTDEELVNHYLCRKCAGLPISVPIIAEIDLYKYDPWELPEMARY 60
                +L LPPGFRF+PTDEEL+  YLCRK AG   S+ +IAEIDLYK+DPW LP  A +
Sbjct: 9   TDPLTQLSLPPGFRFYPTDEELMVQYLCRKAAGYDFSLQLIAEIDLYKFDPWVLPNKALF 68

Query: 61  GEKEWYFFSPRDRKYPNGSRPNRAAGSGYWKATGADKPI-GKPKTLGIKKALVFYAGKAP 119
           GEKEWYFFSPRDRKYPNGSRPNR AGSGYWKATG DK I  + + +GIKKALVFY GKAP
Sbjct: 69  GEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKIISTEGQRVGIKKALVFYIGKAP 128

Query: 120 KGIKTNWIMHEYRPANVHRSPATKNNLRLDDWVLCRLYNKKGRMEK 165
           KG KTNWIMHEYR     R      + +LDDWVLCR+Y K+   +K
Sbjct: 129 KGTKTNWIMHEYRLIEPSRR---NGSTKLDDWVLCRIYKKQSSAQK 171

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	305
3ulx_A	174	Stress-induced transcription factor NAC1; NAC fami	100.0
1ut7_A	171	No apical meristem protein; transcription regulati	100.0

>3ulx_A Stress-induced transcription factor NAC1; NAC family, stress-responsive, DNA binding protein; 2.60A {Oryza sativa subsp} SCOP: b.143.1.1

Probab=100.00  E-value=6.8e-57  Score=396.99  Aligned_cols=161  Identities=76%  Similarity=1.401  Sum_probs=136.6

Q ss_pred             CCCCCCCCceeeCCChHHHHHHHHHHhhcCCCCCCCceeeccCCCCCCCCCccccccCCeeEEEecccCCCCCCCCCCce
Q 021910            4 GAELELPPGFRFHPTDEELVNHYLCRKCAGLPISVPIIAEIDLYKYDPWELPEMARYGEKEWYFFSPRDRKYPNGSRPNR   83 (305)
Q Consensus         4 ~~~~~LPpGfRF~PTDeELV~~YL~~Ki~G~pl~~~iI~evDVY~~ePwdLP~~~~~ge~eWYFFspr~rk~~~G~R~~R   83 (305)
                      .+++.|||||||+|||||||.|||++|+.|.+++.++|+++|||++|||+||+.+..++++|||||++++|+++|+|++|
T Consensus        10 ~~~~~LPpGfRF~PTDeELV~~YL~~K~~g~~~~~~~I~evDvy~~~Pw~Lp~~~~~g~~ewYFFs~r~~ky~~g~R~nR   89 (174)
T 3ulx_A           10 EAELNLPPGFRFHPTDDELVEHYLCRKAAGQRLPVPIIAEVDLYKFDPWDLPERALFGAREWYFFTPRDRKYPNGSRPNR   89 (174)
T ss_dssp             CSTTTCCTTCCCCCCHHHHHHHTHHHHHHTCCCSSSCCEECCGGGSCGGGSGGGCSSCSSEEEEEEECCC-----CCSCE
T ss_pred             ccccCCCCcceeCCCHHHHHHHHHHHHhcCCCCCcCeeeecccccCCchhhhhhhccCCceEEEEeccccccCCCCCcee
Confidence            56789999999999999999999999999999999999999999999999999988888999999999999999999999


Q ss_pred             ecCCCeEEecccccccC-CCcceeEEEEEEeecCCCCCCCccCeEEEEEeeCCCCCCC--cccCCCCCCCEEEEEEEeeC
Q 021910           84 AAGSGYWKATGADKPIG-KPKTLGIKKALVFYAGKAPKGIKTNWIMHEYRPANVHRSP--ATKNNLRLDDWVLCRLYNKK  160 (305)
Q Consensus        84 aaGgG~WK~tG~~k~V~-~gk~vG~KktL~Fy~gk~p~g~KT~WiMhEY~L~~~~~s~--~~~~~~~~dd~VLCRIy~Kk  160 (305)
                      ++++||||++|++++|. .+++||+||+|+||.|+++++.||+|+||||+|.+.....  .+.+....++|||||||+|+
T Consensus        90 ~t~~G~WkatG~dk~I~~~g~~vG~KktLvFy~g~~p~g~kT~WvMhEY~L~~~~~~~~~~~~~~~~~~~wVlCrvf~K~  169 (174)
T 3ulx_A           90 AAGNGYWKATGADKPVAPRGRTLGIKKALVFYAGKAPRGVKTDWIMHEYRLADAGRAAAGAKKGSLRLDDWVLCRLYNKK  169 (174)
T ss_dssp             EETTEEEEECSCCEEECCSSSCCEEEEEEEEEESSTTSCEEEEEEEEEEEECSCC-----------CCSSEEEEEEEESC
T ss_pred             ecCCceEccCCCCcEEeeCCcEEEEEEEEEEecCCCCCCCcCCeEEEEEEeCCCCCcccccccCCCCCCCEEEEEEEEcC
Confidence            99999999999999995 4789999999999999999999999999999999765432  11223467899999999998


Q ss_pred             CCCC
Q 021910          161 GRME  164 (305)
Q Consensus       161 ~~~e  164 (305)
                      +.-+
T Consensus       170 ~~~~  173 (174)
T 3ulx_A          170 NEWE  173 (174)
T ss_dssp             C---
T ss_pred             CCcC
Confidence            7544

>1ut7_A No apical meristem protein; transcription regulation, transcription, transcription factor, DNA binding, abscisic acid response, NAC domain; 1.9A {Arabidopsis thaliana} SCOP: b.143.1.1 PDB: 1ut4_A 4dul_A 3swp_A 3swm_A

Probab=100.00  E-value=8.1e-56  Score=389.11  Aligned_cols=157  Identities=69%  Similarity=1.263  Sum_probs=131.2

Q ss_pred             CCCCCCCceeeCCChHHHHHHHHHHhhcCCCCCCCceeeccCCCCCCCCCccccccCCeeEEEecccCCCCCCCCCCcee
Q 021910            5 AELELPPGFRFHPTDEELVNHYLCRKCAGLPISVPIIAEIDLYKYDPWELPEMARYGEKEWYFFSPRDRKYPNGSRPNRA   84 (305)
Q Consensus         5 ~~~~LPpGfRF~PTDeELV~~YL~~Ki~G~pl~~~iI~evDVY~~ePwdLP~~~~~ge~eWYFFspr~rk~~~G~R~~Ra   84 (305)
                      .++.|||||||+|||||||.|||++|+.|.+++.++|+++|||++|||+||+.+..++++|||||++++|+++|.|++|+
T Consensus        13 ~~~~lPpGfRF~PTDeELv~~YL~~K~~g~~~~~~~I~e~Diy~~~Pw~Lp~~~~~g~~ewyFFs~r~~k~~~g~R~~R~   92 (171)
T 1ut7_A           13 TQLSLPPGFRFYPTDEELMVQYLCRKAAGYDFSLQLIAEIDLYKFDPWVLPNKALFGEKEWYFFSPRDRKYPNGSRPNRV   92 (171)
T ss_dssp             CSSCCCTTEEECCCHHHHHHHTHHHHHTTCCCSSCCSEECCGGGSCGGGHHHHSSSCSSEEEEEEECCC-------CCEE
T ss_pred             cccCCCCcceeCCChHHHHHHHHHHHhcCCCCCCCeEeecccccCChhHhhchhhcCCccEEEEeccccccCCCCccccc
Confidence            46899999999999999999999999999999999999999999999999999888899999999999999999999999


Q ss_pred             cCCCeEEecccccccC-CCcceeEEEEEEeecCCCCCCCccCeEEEEEeeCCCCCCCcccCCCCCCCEEEEEEEeeCCCC
Q 021910           85 AGSGYWKATGADKPIG-KPKTLGIKKALVFYAGKAPKGIKTNWIMHEYRPANVHRSPATKNNLRLDDWVLCRLYNKKGRM  163 (305)
Q Consensus        85 aGgG~WK~tG~~k~V~-~gk~vG~KktL~Fy~gk~p~g~KT~WiMhEY~L~~~~~s~~~~~~~~~dd~VLCRIy~Kk~~~  163 (305)
                      +++||||++|++++|. .+++||+|++|+||.++++++.||+|+||||+|.+...   +.+....++|||||||+|++..
T Consensus        93 t~~G~Wk~tG~~k~I~~~~~~vG~KktLvFy~g~~p~g~kT~WvMhEY~l~~~~~---~~~~~~~~~~VlCrv~~k~~~~  169 (171)
T 1ut7_A           93 AGSGYWKATGTDKIISTEGQRVGIKKALVFYIGKAPKGTKTNWIMHEYRLIEPSR---RNGSTKLDDWVLCRIYKKQSSA  169 (171)
T ss_dssp             ETTEEEEEEEEEEEEEETTEEEEEEEEEEEEESSTTSCEEEEEEEEEEEECCCC-----------CCEEEEEEEECC---
T ss_pred             CCCCEEeccCCCceEEecCcEEEEEEEEEEEcCcCCCCCcCCeEEEEEEcCCCcc---ccCcccCCCEEEEEEEEcCCCC
Confidence            9999999999999984 46899999999999999999999999999999987542   1123456899999999998764


Q ss_pred             C
Q 021910          164 E  164 (305)
Q Consensus       164 e  164 (305)
                      +
T Consensus       170 ~  170 (171)
T 1ut7_A          170 Q  170 (171)
T ss_dssp             -
T ss_pred             C
Confidence            3

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	305
d1ut7a_	166	b.143.1.1 (A:) No apical meristem (NAM, ANAC) {Mou	3e-74

>d1ut7a_ b.143.1.1 (A:) No apical meristem (NAM, ANAC) {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 166

class: All beta proteins
fold: NAC domain
superfamily: NAC domain
family: NAC domain
domain: No apical meristem (NAM, ANAC)
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

 Score =  223 bits (569), Expect = 3e-74
 Identities = 107/157 (68%), Positives = 121/157 (77%), Gaps = 4/157 (2%)

Query: 5   AELELPPGFRFHPTDEELVNHYLCRKCAGLPISVPIIAEIDLYKYDPWELPEMARYGEKE 64
            +L LPPGFRF+PTDEEL+  YLCRK AG   S+ +IAEIDLYK+DPW LP  A +GEKE
Sbjct: 13  TQLSLPPGFRFYPTDEELMVQYLCRKAAGYDFSLQLIAEIDLYKFDPWVLPNKALFGEKE 72

Query: 65  WYFFSPRDRKYPNGSRPNRAAGSGYWKATGADKPI-GKPKTLGIKKALVFYAGKAPKGIK 123
           WYFFSPRDRKYPNGSRPNR AGSGYWKATG DK I  + + +GIKKALVFY GKAPKG K
Sbjct: 73  WYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKIISTEGQRVGIKKALVFYIGKAPKGTK 132

Query: 124 TNWIMHEYRPANVHRSPATKNNLRLDDWVLCRLYNKK 160
           TNWIMHEYR            + +LDDWVLCR+Y K+
Sbjct: 133 TNWIMHEYRLIE---PSRRNGSTKLDDWVLCRIYKKQ 166

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	305
d1ut7a_	166	No apical meristem (NAM, ANAC) {Mouse-ear cress (A	100.0

>d1ut7a_ b.143.1.1 (A:) No apical meristem (NAM, ANAC) {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]}

class: All beta proteins
fold: NAC domain
superfamily: NAC domain
family: NAC domain
domain: No apical meristem (NAM, ANAC)
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=100.00  E-value=1.5e-53  Score=369.65  Aligned_cols=154  Identities=70%  Similarity=1.271  Sum_probs=131.2

Q ss_pred             CCCCCCCCceeeCCChHHHHHHHHHHhhcCCCCCCCceeeccCCCCCCCCCccccccCCeeEEEecccCCCCCCCCCCce
Q 021910            4 GAELELPPGFRFHPTDEELVNHYLCRKCAGLPISVPIIAEIDLYKYDPWELPEMARYGEKEWYFFSPRDRKYPNGSRPNR   83 (305)
Q Consensus         4 ~~~~~LPpGfRF~PTDeELV~~YL~~Ki~G~pl~~~iI~evDVY~~ePwdLP~~~~~ge~eWYFFspr~rk~~~G~R~~R   83 (305)
                      .++++|||||||+|||||||.|||.+|+.|.|++.++|+++|||++|||+||+....++++|||||++.+++++|+|.+|
T Consensus        12 ~~~l~LPpG~RF~PTDeELv~~YL~~Ki~g~~l~~~~I~~~Dvy~~~Pw~Lp~~~~~~~~~wyFft~~~~k~~~g~r~~R   91 (166)
T d1ut7a_          12 LTQLSLPPGFRFYPTDEELMVQYLCRKAAGYDFSLQLIAEIDLYKFDPWVLPNKALFGEKEWYFFSPRDRKYPNGSRPNR   91 (166)
T ss_dssp             CCSSCCCTTEEECCCHHHHHHHTHHHHHTTCCCSSCCSEECCGGGSCGGGHHHHSSSCSSEEEEEEECCC-------CCE
T ss_pred             cccccCCCccccCCCcHHHHHHHHHHHHcCCCCCcccceeccCCcCChhhccchhccCcceEEEEeeeccccCCCCcccc
Confidence            57899999999999999999999999999999999999999999999999999887788999999999999999999999


Q ss_pred             ecCCCeEEecccccccC-CCcceeEEEEEEeecCCCCCCCccCeEEEEEeeCCCCCCCcccCCCCCCCEEEEEEEeeC
Q 021910           84 AAGSGYWKATGADKPIG-KPKTLGIKKALVFYAGKAPKGIKTNWIMHEYRPANVHRSPATKNNLRLDDWVLCRLYNKK  160 (305)
Q Consensus        84 aaGgG~WK~tG~~k~V~-~gk~vG~KktL~Fy~gk~p~g~KT~WiMhEY~L~~~~~s~~~~~~~~~dd~VLCRIy~Kk  160 (305)
                      ++|+|+||++|+++.|. ++.+||+|++|+||+++.+++.+|+|+||||+|.+.....   +....++|||||||+|+
T Consensus        92 ~~g~G~Wk~~g~~~~i~~~g~~vG~kk~l~fy~~~~~~~~~t~W~M~EY~l~~~~~~~---~~~~~~~~VLCrI~~Kk  166 (166)
T d1ut7a_          92 VAGSGYWKATGTDKIISTEGQRVGIKKALVFYIGKAPKGTKTNWIMHEYRLIEPSRRN---GSTKLDDWVLCRIYKKQ  166 (166)
T ss_dssp             EETTEEEEEEEEEEEEEETTEEEEEEEEEEEEESSTTSCEEEEEEEEEEEECCCC-----------CCEEEEEEEECC
T ss_pred             ccCCCEecccCCCceEecCCcEEEEEEEEEEEecCCCCCCccCeEEEEEecCCccccc---CccccCCEEEEEEEecC
Confidence            99999999999999884 5789999999999999999999999999999998754321   23456799999999875