Citrus Sinensis ID: 021952

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-----
MLKWQKVNSGIPSGRFGHTCVVIGDCLVLFGGINDRGNRHNDTWIGQIACHENLGITLSWRLLDVGSIAPPARGAHAACCIDNRKMVIHAGIGLYGLRLGDTWVLELSENFCFGSWQQLVTHPSPPARSGHSLTRIGGNRTVLFGGRGVGYEVLNDVWFLDVYEGFFKWVQIPYELQNIPAGFSLPRVGHSATLILGGRVLIYGGEDSARRRKDDFWVLDTKAIPFTSVQQSMLDSRGLLLNMWKRLRAEGYKPNCRSFHRACPDYSGRYLYVFGGMVDGLVQPADTSGLRFDGRLLLVELVPLL
ccEEEEccccccccccccEEEEEccEEEEEccccccccccccEEEEEccccccccccccEEEEEccccccccccccEEEEEcccEEEEEEEccccccccccEEEEEcccccccccEEEEccccccccccccEEEEEEccEEEEEEcccccccEEcEEEEEEcccccEEEEEEcEEcccccccccccccccEEEEEEccEEEEEEcccccccccccEEEEEcccccccccccccccccccccccEEEEEccccccccccccEEEEEEcccEEEEEcccccccccccccccEEEcccEEEEEccccc
ccEEEEEcccccccccccEEEEEccEEEEEEcccccccccccEEEEEcccccccccccEEEEEcccccccccccccEEEEEcccEEEEEEcccccccccccEEEEEccccccccEEEEEccccccccccccEEEEEcccEEEEEEcccccccccccEEEEEccccccEEEEEccccccccccccccccccEEEEEcccEEEEEEcccccccccccEEEEcccccccccccccccccccccccccEccccccccccccccccEEEEEcccEEEEEEcccccccccccccEEccccccEEEEEEEcc
mlkwqkvnsgipsgrfghtcvVIGDCLVlfggindrgnrhndtwigqiachenlgITLSWRlldvgsiappargahaaccidNRKMVIHAGIGLYGLRLGDTWVLELSEnfcfgswqqlvthpspparsghsltriggnrtvlfggrgvgyevLNDVWFLDVYEGFFKWVQIpyelqnipagfslprvghsatliLGGRVliyggedsarrrkddfwvldtkaipftSVQQSMLDSRGLLLNMWKRLRaegykpncrsfhracpdysgryLYVFGGmvdglvqpadtsglrfdgRLLLVELVPLL
mlkwqkvnsgipsgrfgHTCVVIGDCLVLFGGINDRGNRHNDTWIGQIACHENLGITLSWRLLDVGSIAPPARGAHAACCIDNRKMVIHAGIGLYGLRLGDTWVLELSENFCFGSWQQLVTHPSPPARSGHSLTRIGGNRTVLFGGRGVGYEVLNDVWFLDVYEGFFKWVQIPYELQNIPAGFSLPRVGHSATLILGGRVLIYGGEDSARRRKDDFWVLDTkaipftsvqqsmlDSRGLLLNMWKRLRAEGYKPNCRSFHRACPDYSGRYLYVFGGMVDGLVQPADtsglrfdgRLLLVELVPLL
MLKWQKVNSGIPSGRFGHTCVVIGDCLVLFGGINDRGNRHNDTWIGQIACHENLGITLSWRLLDVGSIAPPARGAHAACCIDNRKMVIHAGIGLYGLRLGDTWVLELSENFCFGSWQQLVTHPSPPARSGHSLTRIGGNRTVLFGGRGVGYEVLNDVWFLDVYEGFFKWVQIPYELQNIPAGFSLPRVGHSATLILGGRVLIYGGEDSARRRKDDFWVLDTKAIPFTSVQQSMLDSRGLLLNMWKRLRAEGYKPNCRSFHRACPDYSGRYLYVFGGMVDGLVQPADTSGLRFDGRlllvelvpll
**********IPSGRFGHTCVVIGDCLVLFGGINDRGNRHNDTWIGQIACHENLGITLSWRLLDVGSIAPPARGAHAACCIDNRKMVIHAGIGLYGLRLGDTWVLELSENFCFGSWQQLVTH**********LTRIGGNRTVLFGGRGVGYEVLNDVWFLDVYEGFFKWVQIPYELQNIPAGFSLPRVGHSATLILGGRVLIYGGEDSARRRKDDFWVLDTKAIPFTSVQQSMLDSRGLLLNMWKRLRAEGYKPNCRSFHRACPDYSGRYLYVFGGMVDGLVQPADTSGLRFDGRLLLVELV***
MLKWQKVNSGIPSGRFGHTCVVIGDCLVLFGGINDRGNRHNDTWIGQIACHENLGITLSWRLLDVGSIAPPARGAHAACCIDNRKMVIHAGIGLYGLRLGDTWVLELSENFCFGSWQQ*****SPPARSGHSLTRIGGNRTVLFGGRGVGYEVLNDVWFLDVYEGFFKWVQIP***********LPRVGHSATLILGGRVLIYGGEDSARRRKDDFWVLDTKAIPFTSVQQSMLDSRGLLLNMWKRLRAEGYKPNCRSFHRACPDYSGRYLYVFGGMVDGLVQPADTSGLRFDGRLLLVELVPLL
MLKWQKVNSGIPSGRFGHTCVVIGDCLVLFGGINDRGNRHNDTWIGQIACHENLGITLSWRLLDVGSIAPPARGAHAACCIDNRKMVIHAGIGLYGLRLGDTWVLELSENFCFGSWQQLVTHPSPPARSGHSLTRIGGNRTVLFGGRGVGYEVLNDVWFLDVYEGFFKWVQIPYELQNIPAGFSLPRVGHSATLILGGRVLIYGGEDSARRRKDDFWVLDTKAIPFTSVQQSMLDSRGLLLNMWKRLRAEGYKPNCRSFHRACPDYSGRYLYVFGGMVDGLVQPADTSGLRFDGRLLLVELVPLL
MLKWQKVNSGIPSGRFGHTCVVIGDCLVLFGGINDRGNRHNDTWIGQIACHENLGITLSWRLLDVGSIAPPARGAHAACCIDNRKMVIHAGIGLYGLRLGDTWVLELSENFCFGSWQQLVTHPSPPARSGHSLTRIGGNRTVLFGGRGVGYEVLNDVWFLDVYEGFFKWVQIPYELQNIPAGFSLPRVGHSATLILGGRVLIYGGEDSARRRKDDFWVLDTKAIPFTSVQQ********LLNMWKRLRAEGYKPNCRSFHRACPDYSGRYLYVFGGMVDGLVQPADTSGLRFDGRLLLVELVPLL
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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iiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MLKWQKVNSGIPSGRFGHTCVVIGDCLVLFGGINDRGNRHNDTWIGQIACHENLGITLSWRLLDVGSIAPPARGAHAACCIDNRKMVIHAGIGLYGLRLGDTWVLELSENFCFGSWQQLVTHPSPPARSGHSLTRIGGNRTVLFGGRGVGYEVLNDVWFLDVYEGFFKWVQIPYELQNIPAGFSLPRVGHSATLILGGRVLIYGGEDSARRRKDDFWVLDTKAIPFTSVQQSMLDSRGLLLNMWKRLRAEGYKPNCRSFHRACPDYSGRYLYVFGGMVDGLVQPADTSGLRFDGRLLLVELVPLL
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query305 2.2.26 [Sep-21-2011]
Q9C8K7478 F-box/kelch-repeat protei yes no 0.960 0.612 0.644 1e-108
Q8W420611 Adagio protein 2 OS=Arabi no no 0.816 0.407 0.295 1e-19
Q7M3S9 943 RING finger protein B OS= yes no 0.609 0.197 0.324 1e-18
Q67UX0635 Putative adagio-like prot no no 0.681 0.327 0.311 1e-17
Q2R2W1630 Adagio-like protein 3 OS= no no 0.675 0.326 0.299 1e-17
Q5Z8K3630 Adagio-like protein 1 OS= no no 0.681 0.330 0.307 2e-17
Q94BT6609 Adagio protein 1 OS=Arabi no no 0.681 0.341 0.302 2e-17
Q9C9W9619 Adagio protein 3 OS=Arabi no no 0.678 0.334 0.285 2e-15
Q39610 4499 Dynein alpha chain, flage N/A no 0.622 0.042 0.276 1e-13
Q61191 2045 Host cell factor 1 OS=Mus yes no 0.767 0.114 0.260 3e-13
>sp|Q9C8K7|FBK21_ARATH F-box/kelch-repeat protein At1g51550 OS=Arabidopsis thaliana GN=At1g51550 PE=2 SV=1 Back     alignment and function desciption
 Score =  390 bits (1002), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 199/309 (64%), Positives = 236/309 (76%), Gaps = 16/309 (5%)

Query: 1   MLKWQKVNSGIPSGRFGHTCVVIGDCLVLFGGINDRGNRHNDTWIGQIACHENLGITLSW 60
           +LKW+KV SG PSGRFGHTC+VIG+ L+LFGGINDRG R NDTWIGQ+ CHE L    SW
Sbjct: 163 ILKWKKVKSGTPSGRFGHTCIVIGEYLLLFGGINDRGERLNDTWIGQVFCHEGL----SW 218

Query: 61  RLLDVGSIA---PPARGAHAACCIDNRKMVIHAGIGLYGLRLGDTWVLELSENFCFGSWQ 117
           +LL+VGS+    PP RGAH+ACCI  +KMV+H GIGL G+RLGDTW+LELSE+F  G+W 
Sbjct: 219 KLLNVGSLQRPRPPPRGAHSACCIAEKKMVVHGGIGLNGVRLGDTWILELSEDFSSGTWH 278

Query: 118 QLVTHPSPPARSGHSLTRIGGNRTVLFGGRGVGYEVLNDVWFLDVYEGF-FKWVQIPYEL 176
            + +   PP RSGH+LT I  N+ VLFGGRG+GY+VL+DVW LD+ E    KW+QI Y+ 
Sbjct: 279 MVESPQLPPPRSGHTLTCIRENQVVLFGGRGLGYDVLDDVWILDIQEPCEEKWIQIFYDF 338

Query: 177 QNIPAGFSLPRVGHSATLILGGRVLIYGGEDSARRRKDDFWVLDTKAIPFTSVQQSMLDS 236
           Q++P   SLPRVGHSATL+LGGR+LIYGGEDS R RKDDFWVLD K IP      S L  
Sbjct: 339 QDVPEYASLPRVGHSATLVLGGRILIYGGEDSYRHRKDDFWVLDVKTIP-----SSGLKP 393

Query: 237 RGLLLN---MWKRLRAEGYKPNCRSFHRACPDYSGRYLYVFGGMVDGLVQPADTSGLRFD 293
           +GL LN   +WK+L    Y P  RSFHRAC D SGR+LYVFGGMVDGL+QPA +SGLRFD
Sbjct: 394 QGLSLNGSSVWKKLDRISYGPKSRSFHRACADCSGRFLYVFGGMVDGLLQPAASSGLRFD 453

Query: 294 GRLLLVELV 302
           G L +VELV
Sbjct: 454 GELFMVELV 462

Arabidopsis thaliana (taxid: 3702)
>sp|Q8W420|ADO2_ARATH Adagio protein 2 OS=Arabidopsis thaliana GN=ADO2 PE=1 SV=1 Back     alignment and function description
>sp|Q7M3S9|RNGB_DICDI RING finger protein B OS=Dictyostelium discoideum GN=rngB PE=2 SV=2 Back     alignment and function description
>sp|Q67UX0|ADO2_ORYSJ Putative adagio-like protein 2 OS=Oryza sativa subsp. japonica GN=Os02g0150800 PE=3 SV=1 Back     alignment and function description
>sp|Q2R2W1|ADO3_ORYSJ Adagio-like protein 3 OS=Oryza sativa subsp. japonica GN=Os11g0547000 PE=2 SV=2 Back     alignment and function description
>sp|Q5Z8K3|ADO1_ORYSJ Adagio-like protein 1 OS=Oryza sativa subsp. japonica GN=Os06g0694000 PE=2 SV=1 Back     alignment and function description
>sp|Q94BT6|ADO1_ARATH Adagio protein 1 OS=Arabidopsis thaliana GN=ADO1 PE=1 SV=2 Back     alignment and function description
>sp|Q9C9W9|ADO3_ARATH Adagio protein 3 OS=Arabidopsis thaliana GN=ADO3 PE=1 SV=1 Back     alignment and function description
>sp|Q39610|DYHA_CHLRE Dynein alpha chain, flagellar outer arm OS=Chlamydomonas reinhardtii GN=ODA11 PE=3 SV=2 Back     alignment and function description
>sp|Q61191|HCFC1_MOUSE Host cell factor 1 OS=Mus musculus GN=Hcfc1 PE=1 SV=2 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query305
225443349 473 PREDICTED: F-box/kelch-repeat protein At 0.990 0.638 0.729 1e-128
147799808 473 hypothetical protein VITISV_029196 [Viti 0.990 0.638 0.729 1e-128
224100511 475 predicted protein [Populus trichocarpa] 0.986 0.633 0.738 1e-127
224109986 469 predicted protein [Populus trichocarpa] 0.983 0.639 0.748 1e-126
356522260 498 PREDICTED: F-box/kelch-repeat protein At 0.990 0.606 0.689 1e-125
255555596 462 ubiquitin-protein ligase, putative [Rici 0.980 0.647 0.733 1e-123
356526302 459 PREDICTED: F-box/kelch-repeat protein At 0.947 0.629 0.659 1e-114
297852882 477 hypothetical protein ARALYDRAFT_474268 [ 0.960 0.614 0.640 1e-106
18403574 478 F-box/kelch-repeat protein [Arabidopsis 0.960 0.612 0.644 1e-106
51968990 476 unknown protein [Arabidopsis thaliana] g 0.960 0.615 0.644 1e-106
>gi|225443349|ref|XP_002264976.1| PREDICTED: F-box/kelch-repeat protein At1g51550 [Vitis vinifera] gi|297735772|emb|CBI18459.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
 Score =  464 bits (1195), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 221/303 (72%), Positives = 255/303 (84%), Gaps = 1/303 (0%)

Query: 1   MLKWQKVNSGIPSGRFGHTCVVIGDCLVLFGGINDRGNRHNDTWIGQIACHENLGITLSW 60
           ML+W+K+ SGIPSGRFGHTCVVIG+ LVLFGGIND G RHNDTW+GQ+A +E LG T+SW
Sbjct: 168 MLRWEKITSGIPSGRFGHTCVVIGNHLVLFGGINDDGIRHNDTWVGQVALNETLGFTVSW 227

Query: 61  RLLDVGSIAPPARGAHAACCIDNRKMVIHAGIGLYGLRLGDTWVLELSENFCFGSWQQLV 120
           RLLDVGS+APP RGAHA CCI N +MVIH GIGLYGLRLGDTW+L+LSEN CFG+W ++V
Sbjct: 228 RLLDVGSVAPPPRGAHAGCCIGNNRMVIHGGIGLYGLRLGDTWMLDLSENLCFGTWHEVV 287

Query: 121 THPSPPARSGHSLTRIGGNRTVLFGGRGVGYEVLNDVWFLDVYEGFFKWVQIPYELQNIP 180
           THPSPPARSGH+LT IGG+RTVLFGGRG+ Y VLND+W  +  E + KWVQI YEL+N+P
Sbjct: 288 THPSPPARSGHTLTCIGGSRTVLFGGRGLSYNVLNDLWLFEFSEVYSKWVQILYELKNVP 347

Query: 181 AGFSLPRVGHSATLILGGRVLIYGGEDSARRRKDDFWVLDTKAI-PFTSVQQSMLDSRGL 239
            G SLPRVGHSATLILGGRVLIYGGEDS R RKDDFWVLDT AI     +    L+SRGL
Sbjct: 348 GGISLPRVGHSATLILGGRVLIYGGEDSQRHRKDDFWVLDTGAITSVNPINPIPLNSRGL 407

Query: 240 LLNMWKRLRAEGYKPNCRSFHRACPDYSGRYLYVFGGMVDGLVQPADTSGLRFDGRLLLV 299
           L+N+WKRL AEGYKP CRSFH AC D SGR+L+VFGGMVDGL++PA+ +G+RFD  L L 
Sbjct: 408 LVNIWKRLNAEGYKPECRSFHGACTDRSGRFLFVFGGMVDGLIRPAEPAGMRFDAELFLA 467

Query: 300 ELV 302
           ELV
Sbjct: 468 ELV 470

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|147799808|emb|CAN68359.1| hypothetical protein VITISV_029196 [Vitis vinifera] Back     alignment and taxonomy information
>gi|224100511|ref|XP_002311905.1| predicted protein [Populus trichocarpa] gi|222851725|gb|EEE89272.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|224109986|ref|XP_002315377.1| predicted protein [Populus trichocarpa] gi|222864417|gb|EEF01548.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|356522260|ref|XP_003529765.1| PREDICTED: F-box/kelch-repeat protein At1g51550-like [Glycine max] Back     alignment and taxonomy information
>gi|255555596|ref|XP_002518834.1| ubiquitin-protein ligase, putative [Ricinus communis] gi|223542007|gb|EEF43552.1| ubiquitin-protein ligase, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|356526302|ref|XP_003531757.1| PREDICTED: F-box/kelch-repeat protein At1g51550-like [Glycine max] Back     alignment and taxonomy information
>gi|297852882|ref|XP_002894322.1| hypothetical protein ARALYDRAFT_474268 [Arabidopsis lyrata subsp. lyrata] gi|297340164|gb|EFH70581.1| hypothetical protein ARALYDRAFT_474268 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|18403574|ref|NP_564592.1| F-box/kelch-repeat protein [Arabidopsis thaliana] gi|75169531|sp|Q9C8K7.1|FBK21_ARATH RecName: Full=F-box/kelch-repeat protein At1g51550 gi|12325373|gb|AAG52632.1|AC024261_19 hypothetical protein; 21456-23101 [Arabidopsis thaliana] gi|115646730|gb|ABJ17097.1| At1g51550 [Arabidopsis thaliana] gi|332194561|gb|AEE32682.1| F-box/kelch-repeat protein [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|51968990|dbj|BAD43187.1| unknown protein [Arabidopsis thaliana] gi|51969154|dbj|BAD43269.1| unknown protein [Arabidopsis thaliana] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query305
TAIR|locus:2033934478 AT1G51550 "AT1G51550" [Arabido 0.944 0.602 0.637 5.4e-102
TAIR|locus:505006254611 LKP2 "AT2G18915" [Arabidopsis 0.681 0.340 0.318 1.3e-22
GENEDB_PFALCIPARUM|PF14_0630 889 PF14_0630 "protein serine/thre 0.655 0.224 0.336 3.9e-20
UNIPROTKB|Q8IKH5 889 PF14_0630 "Serine/threonine-pr 0.655 0.224 0.336 3.9e-20
TAIR|locus:2172994626 ZTL "AT5G57360" [Arabidopsis t 0.681 0.332 0.302 5.5e-20
DICTYBASE|DDB_G0268860 943 rngB "Kelch repeat-containing 0.629 0.203 0.333 1.4e-18
TAIR|locus:2200176619 FKF1 "AT1G68050" [Arabidopsis 0.672 0.331 0.296 1.4e-18
UNIPROTKB|E2RDX4 790 HCFC2 "Uncharacterized protein 0.672 0.259 0.288 9.7e-13
UNIPROTKB|E1BEJ7 792 HCFC2 "Uncharacterized protein 0.672 0.258 0.288 9.7e-13
UNIPROTKB|F1SRK9 792 HCFC2 "Uncharacterized protein 0.672 0.258 0.288 1.6e-12
TAIR|locus:2033934 AT1G51550 "AT1G51550" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1011 (360.9 bits), Expect = 5.4e-102, P = 5.4e-102
 Identities = 190/298 (63%), Positives = 229/298 (76%)

Query:     1 MLKWQKVNSGIPSGRFGHTCVVIGDCLVLFGGINDRGNRHNDTWIGQIACHENLGITLSW 60
             +LKW+KV SG PSGRFGHTC+VIG+ L+LFGGINDRG R NDTWIGQ+ CHE L    SW
Sbjct:   163 ILKWKKVKSGTPSGRFGHTCIVIGEYLLLFGGINDRGERLNDTWIGQVFCHEGL----SW 218

Query:    61 RLLDVGSIA---PPARGAHAACCIDNRKMVIHAGIGLYGLRLGDTWVLELSENFCFGSWQ 117
             +LL+VGS+    PP RGAH+ACCI  +KMV+H GIGL G+RLGDTW+LELSE+F  G+W 
Sbjct:   219 KLLNVGSLQRPRPPPRGAHSACCIAEKKMVVHGGIGLNGVRLGDTWILELSEDFSSGTWH 278

Query:   118 QLVTHPSPPARSGHSLTRIGGNRTVLFGGRGVGYEVLNDVWFLDVYEGFF-KWVQIPYEL 176
              + +   PP RSGH+LT I  N+ VLFGGRG+GY+VL+DVW LD+ E    KW+QI Y+ 
Sbjct:   279 MVESPQLPPPRSGHTLTCIRENQVVLFGGRGLGYDVLDDVWILDIQEPCEEKWIQIFYDF 338

Query:   177 QNIPAGFSLPRVGHSATLILGGRVLIYGGEDSARRRKDDFWVLDTKAIPFTSVQQSMLDS 236
             Q++P   SLPRVGHSATL+LGGR+LIYGGEDS R RKDDFWVLD K IP + ++   L  
Sbjct:   339 QDVPEYASLPRVGHSATLVLGGRILIYGGEDSYRHRKDDFWVLDVKTIPSSGLKPQGLSL 398

Query:   237 RGLLLNMWKRLRAEGYKPNCRSFHRACPDYSGRYLYVFGGMVDGLVQPADTSGLRFDG 294
              G   ++WK+L    Y P  RSFHRAC D SGR+LYVFGGMVDGL+QPA +SGLRFDG
Sbjct:   399 NGS--SVWKKLDRISYGPKSRSFHRACADCSGRFLYVFGGMVDGLLQPAASSGLRFDG 454
GO:0004842 "ubiquitin-protein ligase activity" evidence=ISS
GO:0005634 "nucleus" evidence=ISM
GO:0006511 "ubiquitin-dependent protein catabolic process" evidence=TAS
GO:0045892 "negative regulation of transcription, DNA-dependent" evidence=RCA
TAIR|locus:505006254 LKP2 "AT2G18915" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
GENEDB_PFALCIPARUM|PF14_0630 PF14_0630 "protein serine/threonine phosphatase" [Plasmodium falciparum (taxid:5833)] Back     alignment and assigned GO terms
UNIPROTKB|Q8IKH5 PF14_0630 "Serine/threonine-protein phosphatase" [Plasmodium falciparum 3D7 (taxid:36329)] Back     alignment and assigned GO terms
TAIR|locus:2172994 ZTL "AT5G57360" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
DICTYBASE|DDB_G0268860 rngB "Kelch repeat-containing protein" [Dictyostelium discoideum (taxid:44689)] Back     alignment and assigned GO terms
TAIR|locus:2200176 FKF1 "AT1G68050" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
UNIPROTKB|E2RDX4 HCFC2 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|E1BEJ7 HCFC2 "Uncharacterized protein" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|F1SRK9 HCFC2 "Uncharacterized protein" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q9C8K7FBK21_ARATHNo assigned EC number0.64400.96060.6129yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query305
pfam1341849 pfam13418, Kelch_4, Galactose oxidase, central dom 4e-06
pfam1341849 pfam13418, Kelch_4, Galactose oxidase, central dom 4e-05
pfam1341548 pfam13415, Kelch_3, Galactose oxidase, central dom 9e-05
pfam1341849 pfam13418, Kelch_4, Galactose oxidase, central dom 3e-04
pfam1341548 pfam13415, Kelch_3, Galactose oxidase, central dom 4e-04
pfam1341849 pfam13418, Kelch_4, Galactose oxidase, central dom 5e-04
pfam1341548 pfam13415, Kelch_3, Galactose oxidase, central dom 0.002
pfam1385442 pfam13854, Kelch_5, Kelch motif 0.002
>gnl|CDD|205596 pfam13418, Kelch_4, Galactose oxidase, central domain Back     alignment and domain information 
 Score = 42.6 bits (101), Expect = 4e-06
 Identities = 18/47 (38%), Positives = 24/47 (51%), Gaps = 2/47 (4%)

Query: 127 ARSGHSLTRIGGNRTVLFGGRGVGYEVLNDVWFLDVYEGFFKWVQIP 173
            R+ H+ T IG  R  LFGG      VL+DVW  D+      W ++P
Sbjct: 1   PRAYHTSTSIGDGRLYLFGGENEDGSVLSDVWVFDLSTN--TWTRLP 45

Length = 49
>gnl|CDD|205596 pfam13418, Kelch_4, Galactose oxidase, central domain Back     alignment and domain information
>gnl|CDD|222113 pfam13415, Kelch_3, Galactose oxidase, central domain Back     alignment and domain information
>gnl|CDD|205596 pfam13418, Kelch_4, Galactose oxidase, central domain Back     alignment and domain information
>gnl|CDD|222113 pfam13415, Kelch_3, Galactose oxidase, central domain Back     alignment and domain information
>gnl|CDD|205596 pfam13418, Kelch_4, Galactose oxidase, central domain Back     alignment and domain information
>gnl|CDD|222113 pfam13415, Kelch_3, Galactose oxidase, central domain Back     alignment and domain information
>gnl|CDD|222419 pfam13854, Kelch_5, Kelch motif Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 305
KOG1230 521 consensus Protein containing repeated kelch motifs 100.0
KOG4693392 consensus Uncharacterized conserved protein, conta 100.0
PLN02153341 epithiospecifier protein 100.0
PLN02193470 nitrile-specifier protein 100.0
KOG0379 482 consensus Kelch repeat-containing proteins [Genera 100.0
PLN02153341 epithiospecifier protein 100.0
PLN02193470 nitrile-specifier protein 100.0
PHA02713557 hypothetical protein; Provisional 100.0
TIGR03548323 mutarot_permut cyclically-permuted mutatrotase fam 100.0
KOG4693 392 consensus Uncharacterized conserved protein, conta 100.0
KOG0379 482 consensus Kelch repeat-containing proteins [Genera 100.0
PHA03098534 kelch-like protein; Provisional 100.0
KOG4441571 consensus Proteins containing BTB/POZ and Kelch do 100.0
TIGR03547346 muta_rot_YjhT mutatrotase, YjhT family. Members of 100.0
KOG4152 830 consensus Host cell transcription factor HCFC1 [Ce 100.0
PRK14131376 N-acetylneuraminic acid mutarotase; Provisional 100.0
TIGR03548323 mutarot_permut cyclically-permuted mutatrotase fam 99.97
KOG4441571 consensus Proteins containing BTB/POZ and Kelch do 99.97
TIGR03547346 muta_rot_YjhT mutatrotase, YjhT family. Members of 99.97
KOG1230521 consensus Protein containing repeated kelch motifs 99.97
PRK14131376 N-acetylneuraminic acid mutarotase; Provisional 99.96
PHA03098534 kelch-like protein; Provisional 99.96
PHA02790480 Kelch-like protein; Provisional 99.96
PHA02713557 hypothetical protein; Provisional 99.96
KOG4152 830 consensus Host cell transcription factor HCFC1 [Ce 99.96
PHA02790480 Kelch-like protein; Provisional 99.95
COG3055381 Uncharacterized protein conserved in bacteria [Fun 99.86
KOG2437 723 consensus Muskelin [Signal transduction mechanisms 99.79
COG3055381 Uncharacterized protein conserved in bacteria [Fun 99.75
KOG2437 723 consensus Muskelin [Signal transduction mechanisms 99.59
PF03089337 RAG2: Recombination activating protein 2; InterPro 99.23
PLN02772398 guanylate kinase 99.18
PF1396450 Kelch_6: Kelch motif 99.18
PF03089337 RAG2: Recombination activating protein 2; InterPro 99.16
PF1396450 Kelch_6: Kelch motif 99.14
PLN02772 398 guanylate kinase 99.11
PF1341549 Kelch_3: Galactose oxidase, central domain 99.05
PF1341849 Kelch_4: Galactose oxidase, central domain; PDB: 2 99.03
PF1341849 Kelch_4: Galactose oxidase, central domain; PDB: 2 99.02
PF1341549 Kelch_3: Galactose oxidase, central domain 99.01
PF0764649 Kelch_2: Kelch motif; InterPro: IPR011498 Kelch is 98.88
PF1385442 Kelch_5: Kelch motif 98.87
PF0134447 Kelch_1: Kelch motif; InterPro: IPR006652 Kelch is 98.84
PF0134447 Kelch_1: Kelch motif; InterPro: IPR006652 Kelch is 98.83
PF1385442 Kelch_5: Kelch motif 98.8
PF0764649 Kelch_2: Kelch motif; InterPro: IPR011498 Kelch is 98.78
smart0061247 Kelch Kelch domain. 98.45
smart0061247 Kelch Kelch domain. 98.28
PF07250243 Glyoxal_oxid_N: Glyoxal oxidase N-terminus; InterP 98.19
PF07250243 Glyoxal_oxid_N: Glyoxal oxidase N-terminus; InterP 97.36
TIGR01640230 F_box_assoc_1 F-box protein interaction domain. Th 97.31
PF12768281 Rax2: Cortical protein marker for cell polarity 96.98
PRK11138394 outer membrane biogenesis protein BamB; Provisiona 96.32
PF12768 281 Rax2: Cortical protein marker for cell polarity 96.02
PRK11138394 outer membrane biogenesis protein BamB; Provisiona 95.21
TIGR01640230 F_box_assoc_1 F-box protein interaction domain. Th 95.01
PRK13684334 Ycf48-like protein; Provisional 94.88
PF07893342 DUF1668: Protein of unknown function (DUF1668); In 94.76
PF07893342 DUF1668: Protein of unknown function (DUF1668); In 93.85
TIGR03300377 assembly_YfgL outer membrane assembly lipoprotein 93.36
PF13088275 BNR_2: BNR repeat-like domain; PDB: 2F11_A 2F0Z_A 93.33
PF13360238 PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A 92.65
PRK13684334 Ycf48-like protein; Provisional 92.47
PF13360238 PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A 91.99
cd00216 488 PQQ_DH Dehydrogenases with pyrrolo-quinoline quino 91.84
KOG2055514 consensus WD40 repeat protein [General function pr 91.63
KOG2055514 consensus WD40 repeat protein [General function pr 91.4
PF12217367 End_beta_propel: Catalytic beta propeller domain o 90.99
TIGR03075 527 PQQ_enz_alc_DH PQQ-dependent dehydrogenase, methan 90.24
PF08268129 FBA_3: F-box associated domain; InterPro: IPR01318 89.74
PLN00033398 photosystem II stability/assembly factor; Provisio 88.79
PLN00033398 photosystem II stability/assembly factor; Provisio 87.33
PF14870302 PSII_BNR: Photosynthesis system II assembly factor 87.29
TIGR03300377 assembly_YfgL outer membrane assembly lipoprotein 86.95
PF14870302 PSII_BNR: Photosynthesis system II assembly factor 86.12
PF08268129 FBA_3: F-box associated domain; InterPro: IPR01318 84.68
PF12217367 End_beta_propel: Catalytic beta propeller domain o 83.92
PF05096264 Glu_cyclase_2: Glutamine cyclotransferase; InterPr 83.84
PF10282345 Lactonase: Lactonase, 7-bladed beta-propeller; Int 80.37
cd00216 488 PQQ_DH Dehydrogenases with pyrrolo-quinoline quino 80.33
>KOG1230 consensus Protein containing repeated kelch motifs [General function prediction only] Back     alignment and domain information 
Probab=100.00  E-value=2e-39  Score=273.25  Aligned_cols=258  Identities=25%  Similarity=0.422  Sum_probs=214.9

Q ss_pred             CCCCCCcceeEEEEC--CEEEEEccccCCCC---CcccceeecccccccccccceEEecccCCCCCCCCCCceeEEecCC
Q 021952           10 GIPSGRFGHTCVVIG--DCLVLFGGINDRGN---RHNDTWIGQIACHENLGITLSWRLLDVGSIAPPARGAHAACCIDNR   84 (305)
Q Consensus        10 ~~p~~r~~~~~~~~~--~~lyv~GG~~~~~~---~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~   84 (305)
                      .+|.||.+.++++.-  +.|++|||...+++   ..+|+|+|++       .+++|+++..++ .|+||+.|.++++..+
T Consensus        62 ~~PspRsn~sl~~nPekeELilfGGEf~ngqkT~vYndLy~Yn~-------k~~eWkk~~spn-~P~pRsshq~va~~s~  133 (521)
T KOG1230|consen   62 PPPSPRSNPSLFANPEKEELILFGGEFYNGQKTHVYNDLYSYNT-------KKNEWKKVVSPN-APPPRSSHQAVAVPSN  133 (521)
T ss_pred             CCCCCCCCcceeeccCcceeEEecceeecceeEEEeeeeeEEec-------cccceeEeccCC-CcCCCccceeEEeccC
Confidence            368899999998773  45999999866554   5689999999       899999998775 8999999999999877


Q ss_pred             EEEEEecc--CCCCC---ccCcEEEEeccCCCCCcCeEEcccCCCCCccCCCeeEEEeCCEEEEEcccCCC---Ccccce
Q 021952           85 KMVIHAGI--GLYGL---RLGDTWVLELSENFCFGSWQQLVTHPSPPARSGHSLTRIGGNRTVLFGGRGVG---YEVLND  156 (305)
Q Consensus        85 ~lyv~GG~--~~~~~---~~~~~~~~d~~~~~~~~~W~~~~~~~~p~~r~~~~~~~~~~~~i~v~GG~~~~---~~~~~~  156 (305)
                      .+|+|||.  +++..   ...|+|+||+.++    +|+++..+..|+||++|-|++. +++++||||+...   ..++||
T Consensus       134 ~l~~fGGEfaSPnq~qF~HYkD~W~fd~~tr----kweql~~~g~PS~RSGHRMvaw-K~~lilFGGFhd~nr~y~YyND  208 (521)
T KOG1230|consen  134 ILWLFGGEFASPNQEQFHHYKDLWLFDLKTR----KWEQLEFGGGPSPRSGHRMVAW-KRQLILFGGFHDSNRDYIYYND  208 (521)
T ss_pred             eEEEeccccCCcchhhhhhhhheeeeeeccc----hheeeccCCCCCCCccceeEEe-eeeEEEEcceecCCCceEEeee
Confidence            99999995  33332   2689999999999    9999997789999999999999 4899999999433   447899


Q ss_pred             eEEEEccccceeEEEeccccCCCCCCCCCCcceeEEEEEeCCEEEEEeccCC--------CCCccCcEEEEecCCCCccc
Q 021952          157 VWFLDVYEGFFKWVQIPYELQNIPAGFSLPRVGHSATLILGGRVLIYGGEDS--------ARRRKDDFWVLDTKAIPFTS  228 (305)
Q Consensus       157 ~~~~d~~~~~~~W~~~~~~~~~~~~~~p~~r~~~~~~~~~~~~l~v~GG~~~--------~~~~~~~~~~~d~~~~~~~~  228 (305)
                      +|+||+++  -+|++++     +++..|.||.+|+..+.-++.|||+||++.        .+...+|+|.+++++.... 
T Consensus       209 vy~FdLdt--ykW~Kle-----psga~PtpRSGcq~~vtpqg~i~vyGGYsK~~~kK~~dKG~~hsDmf~L~p~~~~~d-  280 (521)
T KOG1230|consen  209 VYAFDLDT--YKWSKLE-----PSGAGPTPRSGCQFSVTPQGGIVVYGGYSKQRVKKDVDKGTRHSDMFLLKPEDGRED-  280 (521)
T ss_pred             eEEEeccc--eeeeecc-----CCCCCCCCCCcceEEecCCCcEEEEcchhHhhhhhhhhcCceeeeeeeecCCcCCCc-
Confidence            99999999  9999997     567789999999988856999999999953        2445689999999854321 


Q ss_pred             cccccccccccccccceeecccCcCCCCCceeeeeeeCCCcEEEEEcCccCCCcccCCCccccccCceeeEeee
Q 021952          229 VQQSMLDSRGLLLNMWKRLRAEGYKPNCRSFHRACPDYSGRYLYVFGGMVDGLVQPADTSGLRFDGRLLLVELV  302 (305)
Q Consensus       229 ~~~~~~~~~~~~~~~W~~v~~~~~~p~~r~~~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~~~~~d~~~~~~~  302 (305)
                                  +..|++++..|..|.||+++++++.. +++-|.|||.-+-+-. .+....+|.+|+|.|++.
T Consensus       281 ------------Kw~W~kvkp~g~kPspRsgfsv~va~-n~kal~FGGV~D~eee-eEsl~g~F~NDLy~fdlt  340 (521)
T KOG1230|consen  281 ------------KWVWTKVKPSGVKPSPRSGFSVAVAK-NHKALFFGGVCDLEEE-EESLSGEFFNDLYFFDLT  340 (521)
T ss_pred             ------------ceeEeeccCCCCCCCCCCceeEEEec-CCceEEecceeccccc-chhhhhhhhhhhhheecc
Confidence                        68899999999999999999998875 5589999998663322 234444789999999975

>KOG4693 consensus Uncharacterized conserved protein, contains kelch repeat [General function prediction only] Back     alignment and domain information
>PLN02153 epithiospecifier protein Back     alignment and domain information
>PLN02193 nitrile-specifier protein Back     alignment and domain information
>KOG0379 consensus Kelch repeat-containing proteins [General function prediction only] Back     alignment and domain information
>PLN02153 epithiospecifier protein Back     alignment and domain information
>PLN02193 nitrile-specifier protein Back     alignment and domain information
>PHA02713 hypothetical protein; Provisional Back     alignment and domain information
>TIGR03548 mutarot_permut cyclically-permuted mutatrotase family protein Back     alignment and domain information
>KOG4693 consensus Uncharacterized conserved protein, contains kelch repeat [General function prediction only] Back     alignment and domain information
>KOG0379 consensus Kelch repeat-containing proteins [General function prediction only] Back     alignment and domain information
>PHA03098 kelch-like protein; Provisional Back     alignment and domain information
>KOG4441 consensus Proteins containing BTB/POZ and Kelch domains, involved in regulatory/signal transduction processes [Signal transduction mechanisms; General function prediction only] Back     alignment and domain information
>TIGR03547 muta_rot_YjhT mutatrotase, YjhT family Back     alignment and domain information
>KOG4152 consensus Host cell transcription factor HCFC1 [Cell cycle control, cell division, chromosome partitioning; Transcription] Back     alignment and domain information
>PRK14131 N-acetylneuraminic acid mutarotase; Provisional Back     alignment and domain information
>TIGR03548 mutarot_permut cyclically-permuted mutatrotase family protein Back     alignment and domain information
>KOG4441 consensus Proteins containing BTB/POZ and Kelch domains, involved in regulatory/signal transduction processes [Signal transduction mechanisms; General function prediction only] Back     alignment and domain information
>TIGR03547 muta_rot_YjhT mutatrotase, YjhT family Back     alignment and domain information
>KOG1230 consensus Protein containing repeated kelch motifs [General function prediction only] Back     alignment and domain information
>PRK14131 N-acetylneuraminic acid mutarotase; Provisional Back     alignment and domain information
>PHA03098 kelch-like protein; Provisional Back     alignment and domain information
>PHA02790 Kelch-like protein; Provisional Back     alignment and domain information
>PHA02713 hypothetical protein; Provisional Back     alignment and domain information
>KOG4152 consensus Host cell transcription factor HCFC1 [Cell cycle control, cell division, chromosome partitioning; Transcription] Back     alignment and domain information
>PHA02790 Kelch-like protein; Provisional Back     alignment and domain information
>COG3055 Uncharacterized protein conserved in bacteria [Function unknown] Back     alignment and domain information
>KOG2437 consensus Muskelin [Signal transduction mechanisms] Back     alignment and domain information
>COG3055 Uncharacterized protein conserved in bacteria [Function unknown] Back     alignment and domain information
>KOG2437 consensus Muskelin [Signal transduction mechanisms] Back     alignment and domain information
>PF03089 RAG2: Recombination activating protein 2; InterPro: IPR004321 The variable portion of the genes encoding immunoglobulins and T cell receptors are assembled from component V, D, and J DNA segments by a site-specific recombination reaction termed V(D)J recombination Back     alignment and domain information
>PLN02772 guanylate kinase Back     alignment and domain information
>PF13964 Kelch_6: Kelch motif Back     alignment and domain information
>PF03089 RAG2: Recombination activating protein 2; InterPro: IPR004321 The variable portion of the genes encoding immunoglobulins and T cell receptors are assembled from component V, D, and J DNA segments by a site-specific recombination reaction termed V(D)J recombination Back     alignment and domain information
>PF13964 Kelch_6: Kelch motif Back     alignment and domain information
>PLN02772 guanylate kinase Back     alignment and domain information
>PF13415 Kelch_3: Galactose oxidase, central domain Back     alignment and domain information
>PF13418 Kelch_4: Galactose oxidase, central domain; PDB: 2UVK_B Back     alignment and domain information
>PF13418 Kelch_4: Galactose oxidase, central domain; PDB: 2UVK_B Back     alignment and domain information
>PF13415 Kelch_3: Galactose oxidase, central domain Back     alignment and domain information
>PF07646 Kelch_2: Kelch motif; InterPro: IPR011498 Kelch is a 50-residue motif, named after the Drosophila mutant in which it was first identified [] Back     alignment and domain information
>PF13854 Kelch_5: Kelch motif Back     alignment and domain information
>PF01344 Kelch_1: Kelch motif; InterPro: IPR006652 Kelch is a 50-residue motif, named after the Drosophila mutant in which it was first identified [] Back     alignment and domain information
>PF01344 Kelch_1: Kelch motif; InterPro: IPR006652 Kelch is a 50-residue motif, named after the Drosophila mutant in which it was first identified [] Back     alignment and domain information
>PF13854 Kelch_5: Kelch motif Back     alignment and domain information
>PF07646 Kelch_2: Kelch motif; InterPro: IPR011498 Kelch is a 50-residue motif, named after the Drosophila mutant in which it was first identified [] Back     alignment and domain information
>smart00612 Kelch Kelch domain Back     alignment and domain information
>smart00612 Kelch Kelch domain Back     alignment and domain information
>PF07250 Glyoxal_oxid_N: Glyoxal oxidase N-terminus; InterPro: IPR009880 This entry represents the N terminus (approximately 300 residues) of a number of plant and fungal glyoxal oxidase enzymes Back     alignment and domain information
>PF07250 Glyoxal_oxid_N: Glyoxal oxidase N-terminus; InterPro: IPR009880 This entry represents the N terminus (approximately 300 residues) of a number of plant and fungal glyoxal oxidase enzymes Back     alignment and domain information
>TIGR01640 F_box_assoc_1 F-box protein interaction domain Back     alignment and domain information
>PF12768 Rax2: Cortical protein marker for cell polarity Back     alignment and domain information
>PRK11138 outer membrane biogenesis protein BamB; Provisional Back     alignment and domain information
>PF12768 Rax2: Cortical protein marker for cell polarity Back     alignment and domain information
>PRK11138 outer membrane biogenesis protein BamB; Provisional Back     alignment and domain information
>TIGR01640 F_box_assoc_1 F-box protein interaction domain Back     alignment and domain information
>PRK13684 Ycf48-like protein; Provisional Back     alignment and domain information
>PF07893 DUF1668: Protein of unknown function (DUF1668); InterPro: IPR012871 The hypothetical proteins found in this family are expressed by Oryza sativa (Rice) and are of unknown function Back     alignment and domain information
>PF07893 DUF1668: Protein of unknown function (DUF1668); InterPro: IPR012871 The hypothetical proteins found in this family are expressed by Oryza sativa (Rice) and are of unknown function Back     alignment and domain information
>TIGR03300 assembly_YfgL outer membrane assembly lipoprotein YfgL Back     alignment and domain information
>PF13088 BNR_2: BNR repeat-like domain; PDB: 2F11_A 2F0Z_A 1VCU_B 2F25_B 1SO7_A 2F29_A 1SNT_A 2F13_A 2F28_A 2F27_A Back     alignment and domain information
>PF13360 PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A 3Q54_A 2YH3_A 3PRW_A 3P1L_A 3Q7M_A 3Q7O_A 3Q7N_A Back     alignment and domain information
>PRK13684 Ycf48-like protein; Provisional Back     alignment and domain information
>PF13360 PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A 3Q54_A 2YH3_A 3PRW_A 3P1L_A 3Q7M_A 3Q7O_A 3Q7N_A Back     alignment and domain information
>cd00216 PQQ_DH Dehydrogenases with pyrrolo-quinoline quinone (PQQ) as cofactor, like ethanol, methanol, and membrane bound glucose dehydrogenases Back     alignment and domain information
>KOG2055 consensus WD40 repeat protein [General function prediction only] Back     alignment and domain information
>KOG2055 consensus WD40 repeat protein [General function prediction only] Back     alignment and domain information
>PF12217 End_beta_propel: Catalytic beta propeller domain of bacteriophage endosialidase; InterPro: IPR024428 This entry represents the beta propeller domain of endosialidases, which consists of catalytically active part of the enzymes Back     alignment and domain information
>TIGR03075 PQQ_enz_alc_DH PQQ-dependent dehydrogenase, methanol/ethanol family Back     alignment and domain information
>PF08268 FBA_3: F-box associated domain; InterPro: IPR013187 This domain occurs in a diverse superfamily of genes in plants Back     alignment and domain information
>PLN00033 photosystem II stability/assembly factor; Provisional Back     alignment and domain information
>PLN00033 photosystem II stability/assembly factor; Provisional Back     alignment and domain information
>PF14870 PSII_BNR: Photosynthesis system II assembly factor YCF48; PDB: 2XBG_A Back     alignment and domain information
>TIGR03300 assembly_YfgL outer membrane assembly lipoprotein YfgL Back     alignment and domain information
>PF14870 PSII_BNR: Photosynthesis system II assembly factor YCF48; PDB: 2XBG_A Back     alignment and domain information
>PF08268 FBA_3: F-box associated domain; InterPro: IPR013187 This domain occurs in a diverse superfamily of genes in plants Back     alignment and domain information
>PF12217 End_beta_propel: Catalytic beta propeller domain of bacteriophage endosialidase; InterPro: IPR024428 This entry represents the beta propeller domain of endosialidases, which consists of catalytically active part of the enzymes Back     alignment and domain information
>PF05096 Glu_cyclase_2: Glutamine cyclotransferase; InterPro: IPR007788 This family of enzymes 2 Back     alignment and domain information
>PF10282 Lactonase: Lactonase, 7-bladed beta-propeller; InterPro: IPR019405 6-phosphogluconolactonases (6PGL) 3 Back     alignment and domain information
>cd00216 PQQ_DH Dehydrogenases with pyrrolo-quinoline quinone (PQQ) as cofactor, like ethanol, methanol, and membrane bound glucose dehydrogenases Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query305
2zwa_A695 Leucine carboxyl methyltransferase 2; HET: SAH CIT 3e-33
2zwa_A695 Leucine carboxyl methyltransferase 2; HET: SAH CIT 6e-31
2zwa_A 695 Leucine carboxyl methyltransferase 2; HET: SAH CIT 7e-29
2zwa_A695 Leucine carboxyl methyltransferase 2; HET: SAH CIT 3e-28
2zwa_A695 Leucine carboxyl methyltransferase 2; HET: SAH CIT 5e-15
2uvk_A357 YJHT; unknown function, hypothetical protein, sial 2e-16
2uvk_A357 YJHT; unknown function, hypothetical protein, sial 1e-11
2uvk_A357 YJHT; unknown function, hypothetical protein, sial 6e-10
2uvk_A 357 YJHT; unknown function, hypothetical protein, sial 4e-07
4asc_A315 Kelch repeat and BTB domain-containing protein 5; 2e-06
4asc_A315 Kelch repeat and BTB domain-containing protein 5; 3e-05
2woz_A318 Kelch repeat and BTB domain-containing protein 10; 1e-05
2woz_A318 Kelch repeat and BTB domain-containing protein 10; 5e-04
2vpj_A301 Kelch-like protein 12; adaptor protein, WNT signal 4e-05
1zgk_A308 Kelch-like ECH-associated protein 1; beta-propelle 7e-05
3ii7_A306 Kelch-like protein 7; protein-binding, kelch-repea 8e-05
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A* Length = 695 Back     alignment and structure
 Score =  128 bits (322), Expect = 3e-33
 Identities = 31/210 (14%), Positives = 60/210 (28%), Gaps = 22/210 (10%)

Query: 3   KWQKVNSGIPSGRFGHTCVVIGD-CLVLFGGINDRGNRHNDTWIGQIACHENLGITLSWR 61
           +W  + S +   RF H+   + D  +++ GG+ +                        ++
Sbjct: 479 EWSMIKS-LSHTRFRHSACSLPDGNVLILGGVTEGPAMLLYNVT-----------EEIFK 526

Query: 62  LLDVGSIAPPARGAHAACCID---NRKMVIHAGIGLYGLRLGDTWVLELSENFCFGSWQQ 118
            +             A    D    + +++  G            + +            
Sbjct: 527 DVTPKDEFFQNSLVSAGLEFDPVSKQGIILGGGFMDQTTVSDKAIIFKYDAENATEPITV 586

Query: 119 LVTHPSPP-ARSGHSLTRIGGNRTVLFGGRGVG--YEVLNDVWFLDVYEGFFKWVQIPYE 175
           +     P   R G  +  I   + ++ GG      ++  N +  LD          IP  
Sbjct: 587 IKKLQHPLFQRYGSQIKYITPRKLLIVGGTSPSGLFDRTNSIISLDP--LSETLTSIPIS 644

Query: 176 LQNIPAGFSLPRVGHSATLILGGRVLIYGG 205
            + I    SL   G S      G + I GG
Sbjct: 645 -RRIWEDHSLMLAGFSLVSTSMGTIHIIGG 673
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A* Length = 695 Back     alignment and structure
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A* Length = 695 Back     alignment and structure
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A* Length = 695 Back     alignment and structure
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A* Length = 695 Back     alignment and structure
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli} Length = 357 Back     alignment and structure
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli} Length = 357 Back     alignment and structure
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli} Length = 357 Back     alignment and structure
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli} Length = 357 Back     alignment and structure
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens} Length = 315 Back     alignment and structure
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens} Length = 315 Back     alignment and structure
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus} Length = 318 Back     alignment and structure
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus} Length = 318 Back     alignment and structure
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens} Length = 301 Back     alignment and structure
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A Length = 308 Back     alignment and structure
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens} Length = 306 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query305
3ii7_A306 Kelch-like protein 7; protein-binding, kelch-repea 100.0
4asc_A315 Kelch repeat and BTB domain-containing protein 5; 100.0
1zgk_A308 Kelch-like ECH-associated protein 1; beta-propelle 100.0
2xn4_A302 Kelch-like protein 2; structural protein, cytoskel 100.0
2woz_A318 Kelch repeat and BTB domain-containing protein 10; 100.0
2vpj_A301 Kelch-like protein 12; adaptor protein, WNT signal 100.0
1zgk_A308 Kelch-like ECH-associated protein 1; beta-propelle 100.0
2uvk_A357 YJHT; unknown function, hypothetical protein, sial 100.0
4asc_A315 Kelch repeat and BTB domain-containing protein 5; 100.0
2woz_A318 Kelch repeat and BTB domain-containing protein 10; 100.0
2zwa_A695 Leucine carboxyl methyltransferase 2; HET: SAH CIT 100.0
3ii7_A306 Kelch-like protein 7; protein-binding, kelch-repea 100.0
2vpj_A301 Kelch-like protein 12; adaptor protein, WNT signal 100.0
2uvk_A357 YJHT; unknown function, hypothetical protein, sial 100.0
2xn4_A302 Kelch-like protein 2; structural protein, cytoskel 100.0
2zwa_A695 Leucine carboxyl methyltransferase 2; HET: SAH CIT 100.0
1k3i_A656 Galactose oxidase precursor; blade beta propeller, 99.94
1k3i_A 656 Galactose oxidase precursor; blade beta propeller, 99.94
3mbr_X243 Glutamine cyclotransferase; beta-propeller; 1.44A 97.17
3dsm_A328 Uncharacterized protein bacuni_02894; seven_blated 96.74
3nol_A262 Glutamine cyclotransferase; beta-propeller, glutam 96.58
3nok_A268 Glutaminyl cyclase; beta-propeller, cyclotransfera 96.37
3dsm_A328 Uncharacterized protein bacuni_02894; seven_blated 96.02
3mbr_X243 Glutamine cyclotransferase; beta-propeller; 1.44A 95.96
2iwa_A266 Glutamine cyclotransferase; pyroglutamate, acyltra 95.71
3q7m_A376 Lipoprotein YFGL, BAMB; beta-propeller, BAM comple 95.03
3nol_A262 Glutamine cyclotransferase; beta-propeller, glutam 94.6
3nok_A268 Glutaminyl cyclase; beta-propeller, cyclotransfera 94.1
2iwa_A266 Glutamine cyclotransferase; pyroglutamate, acyltra 94.04
1l0q_A 391 Surface layer protein; SLP, S-layer, 7-bladed beta 93.75
2xbg_A327 YCF48-like protein; photosynthesis, photosystem II 93.0
3jrp_A 379 Fusion protein of protein transport protein SEC13 92.97
3bws_A433 Protein LP49; two-domain, immunoglobulin-like, 7-b 92.93
2xbg_A327 YCF48-like protein; photosynthesis, photosystem II 92.64
3ju4_A 670 Endo-N-acetylneuraminidase; endonf, polysia, high- 92.57
2hqs_A415 Protein TOLB; TOLB, PAL, TOL, transport protein-li 92.56
3q7m_A376 Lipoprotein YFGL, BAMB; beta-propeller, BAM comple 92.49
3v9f_A781 Two-component system sensor histidine kinase/RESP 91.65
3jrp_A379 Fusion protein of protein transport protein SEC13 91.46
2dg1_A333 DRP35, lactonase; beta propeller, hydrolase; 1.72A 91.26
1kb0_A 677 Quinohemoprotein alcohol dehydrogenase; beta-prope 90.04
3jro_A 753 Fusion protein of protein transport protein SEC13 89.91
1yiq_A 689 Quinohemoprotein alcohol dehydrogenase; electron t 89.86
3c5m_A396 Oligogalacturonate lyase; blade-shaped beta-propel 89.8
3bws_A433 Protein LP49; two-domain, immunoglobulin-like, 7-b 89.52
2dg1_A333 DRP35, lactonase; beta propeller, hydrolase; 1.72A 89.37
4a2l_A795 BT_4663, two-component system sensor histidine kin 89.21
1kb0_A 677 Quinohemoprotein alcohol dehydrogenase; beta-prope 88.37
3hfq_A347 Uncharacterized protein LP_2219; Q88V64_lacpl, NES 87.96
1kv9_A 668 Type II quinohemoprotein alcohol dehydrogenase; el 87.74
2ad6_A 571 Methanol dehydrogenase subunit 1; PQQ configuratio 87.66
2aq5_A402 Coronin-1A; WD40 repeat, 7-bladed beta-propeller, 87.59
1k8k_C 372 P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta- 87.59
1l0q_A 391 Surface layer protein; SLP, S-layer, 7-bladed beta 87.53
3ott_A758 Two-component system sensor histidine kinase; beta 87.0
3jro_A 753 Fusion protein of protein transport protein SEC13 86.81
3ju4_A670 Endo-N-acetylneuraminidase; endonf, polysia, high- 86.3
3vgz_A353 Uncharacterized protein YNCE; beta-propeller, prot 86.2
2ad6_A 571 Methanol dehydrogenase subunit 1; PQQ configuratio 86.19
1jmx_B349 Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 86.17
3vgz_A353 Uncharacterized protein YNCE; beta-propeller, prot 85.92
1flg_A 582 Protein (quinoprotein ethanol dehydrogenase); supe 85.47
1w6s_A 599 Methanol dehydrogenase subunit 1; anisotropic, ele 85.35
3pe7_A388 Oligogalacturonate lyase; seven-bladed beta-propel 85.06
3v9f_A781 Two-component system sensor histidine kinase/RESP 84.81
4d9s_A406 UVB-resistance protein UVR8; UV resistance, UV-B p 84.53
4d9s_A406 UVB-resistance protein UVR8; UV resistance, UV-B p 84.31
3scy_A 361 Hypothetical bacterial 6-phosphogluconolactonase; 83.94
1q7f_A286 NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL 83.87
1r5m_A425 SIR4-interacting protein SIF2; transcription corep 82.91
1k8k_C 372 P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta- 82.39
1nir_A 543 Nitrite reductase; hemoprotein, denitrification, d 82.27
1w6s_A 599 Methanol dehydrogenase subunit 1; anisotropic, ele 82.2
4gqb_B344 Methylosome protein 50; TIM barrel, beta-propeller 81.9
1ri6_A343 Putative isomerase YBHE; 7-bladed propeller, enzym 81.4
4g56_B357 MGC81050 protein; protein arginine methyltransfera 81.31
3dwl_C 377 Actin-related protein 2/3 complex subunit 1; prope 81.01
4e54_B435 DNA damage-binding protein 2; beta barrel, double 80.92
3fm0_A345 Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD r 80.6
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens} Back     alignment and structure
Probab=100.00  E-value=4.5e-38  Score=272.47  Aligned_cols=222  Identities=19%  Similarity=0.267  Sum_probs=193.4

Q ss_pred             ceEecCCCCCCCCcceeEEEECCEEEEEccccCCCCCcccceeecccccccccccceEEecccCCCCCCCCCCceeEEec
Q 021952            3 KWQKVNSGIPSGRFGHTCVVIGDCLVLFGGINDRGNRHNDTWIGQIACHENLGITLSWRLLDVGSIAPPARGAHAACCID   82 (305)
Q Consensus         3 ~W~~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~p~~r~~~~~~~~~   82 (305)
                      +|++++ ..|.+|.+|+++.++++||++||..  ....+++++||+       .+.+|+.+..   +|.+|..|+++.++
T Consensus        35 ~W~~~~-~~p~~r~~~~~~~~~~~lyv~GG~~--~~~~~~~~~~d~-------~~~~W~~~~~---~p~~r~~~~~~~~~  101 (306)
T 3ii7_A           35 SWTDIR-CPFEKRRDAACVFWDNVVYILGGSQ--LFPIKRMDCYNV-------VKDSWYSKLG---PPTPRDSLAACAAE  101 (306)
T ss_dssp             EEEECC-CCSCCCBSCEEEEETTEEEEECCBS--SSBCCEEEEEET-------TTTEEEEEEC---CSSCCBSCEEEEET
T ss_pred             CEecCC-CCCcccceeEEEEECCEEEEEeCCC--CCCcceEEEEeC-------CCCeEEECCC---CCccccceeEEEEC
Confidence            699996 5788999999999999999999987  456789999999       8999999863   68899999999998


Q ss_pred             CCEEEEEeccCCCCCccCcEEEEeccCCCCCcCeEEcccCCCCCccCCCeeEEEeCCEEEEEcccCCCCc---ccceeEE
Q 021952           83 NRKMVIHAGIGLYGLRLGDTWVLELSENFCFGSWQQLVTHPSPPARSGHSLTRIGGNRTVLFGGRGVGYE---VLNDVWF  159 (305)
Q Consensus        83 ~~~lyv~GG~~~~~~~~~~~~~~d~~~~~~~~~W~~~~~~~~p~~r~~~~~~~~~~~~i~v~GG~~~~~~---~~~~~~~  159 (305)
                      + +||++||.......++++++||+.++    +|++++  ++|.+|..|+++.+ +++||++||......   ..+++++
T Consensus       102 ~-~iyv~GG~~~~~~~~~~~~~~d~~~~----~W~~~~--~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~~~  173 (306)
T 3ii7_A          102 G-KIYTSGGSEVGNSALYLFECYDTRTE----SWHTKP--SMLTQRCSHGMVEA-NGLIYVCGGSLGNNVSGRVLNSCEV  173 (306)
T ss_dssp             T-EEEEECCBBTTBSCCCCEEEEETTTT----EEEEEC--CCSSCCBSCEEEEE-TTEEEEECCEESCTTTCEECCCEEE
T ss_pred             C-EEEEECCCCCCCcEeeeEEEEeCCCC----ceEeCC--CCcCCcceeEEEEE-CCEEEEECCCCCCCCcccccceEEE
Confidence            7 99999998645567899999999999    999997  88999999999998 589999999853332   2889999


Q ss_pred             EEccccceeEEEeccccCCCCCCCCCCcceeEEEEEeCCEEEEEeccCCCCCccCcEEEEecCCCCcccccccccccccc
Q 021952          160 LDVYEGFFKWVQIPYELQNIPAGFSLPRVGHSATLILGGRVLIYGGEDSARRRKDDFWVLDTKAIPFTSVQQSMLDSRGL  239 (305)
Q Consensus       160 ~d~~~~~~~W~~~~~~~~~~~~~~p~~r~~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~  239 (305)
                      ||+.+  ++|+++.        ++|.+|..|++++ .+++|||+||.+.. ...+++++||+.                 
T Consensus       174 yd~~~--~~W~~~~--------~~p~~r~~~~~~~-~~~~i~v~GG~~~~-~~~~~~~~yd~~-----------------  224 (306)
T 3ii7_A          174 YDPAT--ETWTELC--------PMIEARKNHGLVF-VKDKIFAVGGQNGL-GGLDNVEYYDIK-----------------  224 (306)
T ss_dssp             EETTT--TEEEEEC--------CCSSCCBSCEEEE-ETTEEEEECCEETT-EEBCCEEEEETT-----------------
T ss_pred             eCCCC--CeEEECC--------CccchhhcceEEE-ECCEEEEEeCCCCC-CCCceEEEeeCC-----------------
Confidence            99999  9999994        7899999999887 69999999998654 457889999998                 


Q ss_pred             ccccceeecccCcCCCCCceeeeeeeCCCcEEEEEcCccCC
Q 021952          240 LLNMWKRLRAEGYKPNCRSFHRACPDYSGRYLYVFGGMVDG  280 (305)
Q Consensus       240 ~~~~W~~v~~~~~~p~~r~~~~~~~~~~~~~i~v~GG~~~~  280 (305)
                       +++|+.+..   +|.+|..|+++++  +++|||+||....
T Consensus       225 -~~~W~~~~~---~p~~r~~~~~~~~--~~~i~v~GG~~~~  259 (306)
T 3ii7_A          225 -LNEWKMVSP---MPWKGVTVKCAAV--GSIVYVLAGFQGV  259 (306)
T ss_dssp             -TTEEEECCC---CSCCBSCCEEEEE--TTEEEEEECBCSS
T ss_pred             -CCcEEECCC---CCCCccceeEEEE--CCEEEEEeCcCCC
Confidence             889999864   8899999988875  6899999998543
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens} Back     alignment and structure
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A Back     alignment and structure
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens} Back     alignment and structure
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus} Back     alignment and structure
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens} Back     alignment and structure
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A Back     alignment and structure
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli} Back     alignment and structure
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens} Back     alignment and structure
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus} Back     alignment and structure
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A* Back     alignment and structure
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens} Back     alignment and structure
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens} Back     alignment and structure
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli} Back     alignment and structure
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens} Back     alignment and structure
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A* Back     alignment and structure
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A Back     alignment and structure
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A Back     alignment and structure
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris} Back     alignment and structure
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis} Back     alignment and structure
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A Back     alignment and structure
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus} Back     alignment and structure
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis} Back     alignment and structure
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris} Back     alignment and structure
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A* Back     alignment and structure
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A Back     alignment and structure
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A Back     alignment and structure
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus} Back     alignment and structure
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A* Back     alignment and structure
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3 Back     alignment and structure
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus} Back     alignment and structure
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae} Back     alignment and structure
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans} Back     alignment and structure
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus} Back     alignment and structure
>3ju4_A Endo-N-acetylneuraminidase; endonf, polysia, high-resolution, glycosidase, hydrolase; HET: SLB; 0.98A {Enterobacteria phage K1F} PDB: 3gvl_A* 3gvj_A* 3gvk_A* 1v0e_A 1v0f_A* Back     alignment and structure
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A Back     alignment and structure
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A Back     alignment and structure
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron} Back     alignment and structure
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae} Back     alignment and structure
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A Back     alignment and structure
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1 Back     alignment and structure
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae} Back     alignment and structure
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida} Back     alignment and structure
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633} Back     alignment and structure
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans} Back     alignment and structure
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A Back     alignment and structure
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A* Back     alignment and structure
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1 Back     alignment and structure
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum} Back     alignment and structure
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1 Back     alignment and structure
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A* Back     alignment and structure
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A Back     alignment and structure
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C Back     alignment and structure
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3 Back     alignment and structure
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A Back     alignment and structure
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae} Back     alignment and structure
>3ju4_A Endo-N-acetylneuraminidase; endonf, polysia, high-resolution, glycosidase, hydrolase; HET: SLB; 0.98A {Enterobacteria phage K1F} PDB: 3gvl_A* 3gvj_A* 3gvk_A* 1v0e_A 1v0f_A* Back     alignment and structure
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A* Back     alignment and structure
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A* Back     alignment and structure
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B* Back     alignment and structure
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A* Back     alignment and structure
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1 Back     alignment and structure
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A* Back     alignment and structure
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp} Back     alignment and structure
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron} Back     alignment and structure
>4d9s_A UVB-resistance protein UVR8; UV resistance, UV-B photoreceptor, tryptophan chromophores, homodimer, COP1, chromatin-binding protein; 1.70A {Arabidopsis thaliana} PDB: 4dnw_A 4dnu_A 4dnv_A Back     alignment and structure
>4d9s_A UVB-resistance protein UVR8; UV resistance, UV-B photoreceptor, tryptophan chromophores, homodimer, COP1, chromatin-binding protein; 1.70A {Arabidopsis thaliana} PDB: 4dnw_A 4dnu_A 4dnv_A Back     alignment and structure
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A Back     alignment and structure
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1 Back     alignment and structure
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae} Back     alignment and structure
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C Back     alignment and structure
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A* Back     alignment and structure
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A* Back     alignment and structure
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} Back     alignment and structure
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1 Back     alignment and structure
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis} Back     alignment and structure
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe} Back     alignment and structure
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B* Back     alignment and structure
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query305
d1zgka1288 Kelch-like ECH-associated protein 1, KEAP1 {Human 100.0
d1zgka1288 Kelch-like ECH-associated protein 1, KEAP1 {Human 99.96
d1k3ia3387 Galactose oxidase, central domain {Fungi (Fusarium 99.95
d1k3ia3 387 Galactose oxidase, central domain {Fungi (Fusarium 99.81
d1nr0a2299 Actin interacting protein 1 {Nematode (Caenorhabdi 92.14
d1nr0a2299 Actin interacting protein 1 {Nematode (Caenorhabdi 91.54
d1kb0a2 573 Quinoprotein alcohol dehydrogenase, N-terminal dom 89.17
d2ad6a1 571 Methanol dehydrogenase, heavy chain {Methylophilus 87.0
d1kv9a2 560 Quinoprotein alcohol dehydrogenase, N-terminal dom 86.73
d1k8kc_ 371 Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taur 84.36
d1kb0a2 573 Quinoprotein alcohol dehydrogenase, N-terminal dom 81.98
d1w6sa_ 596 Methanol dehydrogenase, heavy chain {Methylobacter 81.55
d2ad6a1 571 Methanol dehydrogenase, heavy chain {Methylophilus 81.24
>d1zgka1 b.68.11.1 (A:322-609) Kelch-like ECH-associated protein 1, KEAP1 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Kelch motif
family: Kelch motif
domain: Kelch-like ECH-associated protein 1, KEAP1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=7.9e-32  Score=228.62  Aligned_cols=221  Identities=19%  Similarity=0.248  Sum_probs=188.1

Q ss_pred             ceEecCCCCCCCCcceeEEEECCEEEEEccccCC---CCCcccceeecccccccccccceEEecccCCCCCCCCCCceeE
Q 021952            3 KWQKVNSGIPSGRFGHTCVVIGDCLVLFGGINDR---GNRHNDTWIGQIACHENLGITLSWRLLDVGSIAPPARGAHAAC   79 (305)
Q Consensus         3 ~W~~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~---~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~p~~r~~~~~~   79 (305)
                      +|++++ ..|.+|.+|+++.++++|||+||....   ....+++|+||+       .+.+|+++.   .+|.+|..|+++
T Consensus        30 ~W~~~~-~~p~~R~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~yd~-------~~~~w~~~~---~~p~~r~~~~~~   98 (288)
T d1zgka1          30 TWLRLA-DLQVPRSGLAGCVVGGLLYAVGGRNNSPDGNTDSSALDCYNP-------MTNQWSPCA---PMSVPRNRIGVG   98 (288)
T ss_dssp             EEEECC-CCSSCCBSCEEEEETTEEEEECCEEEETTEEEECCCEEEEET-------TTTEEEECC---CCSSCCBTCEEE
T ss_pred             eEEECC-CCCCccceeEEEEECCEEEEEeCcccCCCCccccchhhhccc-------ccccccccc---cccceecceecc
Confidence            699996 578999999999999999999997532   235689999999       899999977   378899999999


Q ss_pred             EecCCEEEEEeccCCCCCccCcEEEEeccCCCCCcCeEEcccCCCCCccCCCeeEEEeCCEEEEEcccCCCCcccceeEE
Q 021952           80 CIDNRKMVIHAGIGLYGLRLGDTWVLELSENFCFGSWQQLVTHPSPPARSGHSLTRIGGNRTVLFGGRGVGYEVLNDVWF  159 (305)
Q Consensus        80 ~~~~~~lyv~GG~~~~~~~~~~~~~~d~~~~~~~~~W~~~~~~~~p~~r~~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~  159 (305)
                      ..++ ++|++||.... ..+++.+.+|+.++    +|...+  ..+.+|.+|+++.. +++++++||.. .....++++.
T Consensus        99 ~~~~-~i~~~gg~~~~-~~~~~~~~~~~~~~----~~~~~~--~~~~~r~~~~~~~~-~~~~~~~GG~~-~~~~~~~~~~  168 (288)
T d1zgka1          99 VIDG-HIYAVGGSHGC-IHHNSVERYEPERD----EWHLVA--PMLTRRIGVGVAVL-NRLLYAVGGFD-GTNRLNSAEC  168 (288)
T ss_dssp             EETT-EEEEECCEETT-EECCCEEEEETTTT----EEEECC--CCSSCCBSCEEEEE-TTEEEEECCBC-SSCBCCCEEE
T ss_pred             ccce-eeEEecceecc-cccceeeeeccccC----cccccc--ccccccccceeeee-eecceEecCcc-cccccceEEE
Confidence            9987 99999997433 46788999999998    999887  77889999999998 58999999985 5566788999


Q ss_pred             EEccccceeEEEeccccCCCCCCCCCCcceeEEEEEeCCEEEEEeccCCCCCccCcEEEEecCCCCcccccccccccccc
Q 021952          160 LDVYEGFFKWVQIPYELQNIPAGFSLPRVGHSATLILGGRVLIYGGEDSARRRKDDFWVLDTKAIPFTSVQQSMLDSRGL  239 (305)
Q Consensus       160 ~d~~~~~~~W~~~~~~~~~~~~~~p~~r~~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~  239 (305)
                      ||+.+  .+|....        ..+.++..++++. .+++|+++||.+.. ...+++++||..                 
T Consensus       169 ~d~~~--~~~~~~~--------~~~~~~~~~~~~~-~~~~i~i~GG~~~~-~~~~~~~~~~~~-----------------  219 (288)
T d1zgka1         169 YYPER--NEWRMIT--------AMNTIRSGAGVCV-LHNCIYAAGGYDGQ-DQLNSVERYDVE-----------------  219 (288)
T ss_dssp             EETTT--TEEEECC--------CCSSCCBSCEEEE-ETTEEEEECCBCSS-SBCCCEEEEETT-----------------
T ss_pred             eeccc--ccccccc--------ccccccccccccc-eeeeEEEecCcccc-ccccceeeeeec-----------------
Confidence            99999  9999884        6777888887776 78999999998754 457889999998                 


Q ss_pred             ccccceeecccCcCCCCCceeeeeeeCCCcEEEEEcCccC
Q 021952          240 LLNMWKRLRAEGYKPNCRSFHRACPDYSGRYLYVFGGMVD  279 (305)
Q Consensus       240 ~~~~W~~v~~~~~~p~~r~~~~~~~~~~~~~i~v~GG~~~  279 (305)
                       +.+|+.+..   .|.+|..|++++.  +++|||+||...
T Consensus       220 -~~~~~~~~~---~p~~r~~~~~~~~--~~~l~v~GG~~~  253 (288)
T d1zgka1         220 -TETWTFVAP---MKHRRSALGITVH--QGRIYVLGGYDG  253 (288)
T ss_dssp             -TTEEEECCC---CSSCCBSCEEEEE--TTEEEEECCBCS
T ss_pred             -ceeeecccC---ccCcccceEEEEE--CCEEEEEecCCC
Confidence             889998865   7899999998874  689999999844
>d1zgka1 b.68.11.1 (A:322-609) Kelch-like ECH-associated protein 1, KEAP1 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1k3ia3 b.69.1.1 (A:151-537) Galactose oxidase, central domain {Fungi (Fusarium sp.) [TaxId: 29916]} Back     information, alignment and structure
>d1k3ia3 b.69.1.1 (A:151-537) Galactose oxidase, central domain {Fungi (Fusarium sp.) [TaxId: 29916]} Back     information, alignment and structure
>d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Back     information, alignment and structure
>d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Back     information, alignment and structure
>d1kb0a2 b.70.1.1 (A:1-573) Quinoprotein alcohol dehydrogenase, N-terminal domain {Comamonas testosteroni [TaxId: 285]} Back     information, alignment and structure
>d2ad6a1 b.70.1.1 (A:1-571) Methanol dehydrogenase, heavy chain {Methylophilus methylotrophus, w3a1 [TaxId: 17]} Back     information, alignment and structure
>d1kv9a2 b.70.1.1 (A:1-560) Quinoprotein alcohol dehydrogenase, N-terminal domain {Pseudomonas putida, hk5 [TaxId: 303]} Back     information, alignment and structure
>d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
>d1kb0a2 b.70.1.1 (A:1-573) Quinoprotein alcohol dehydrogenase, N-terminal domain {Comamonas testosteroni [TaxId: 285]} Back     information, alignment and structure
>d1w6sa_ b.70.1.1 (A:) Methanol dehydrogenase, heavy chain {Methylobacterium extorquens [TaxId: 408]} Back     information, alignment and structure
>d2ad6a1 b.70.1.1 (A:1-571) Methanol dehydrogenase, heavy chain {Methylophilus methylotrophus, w3a1 [TaxId: 17]} Back     information, alignment and structure