Citrus Sinensis ID: 021968


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300----
MGSVALAGTLLVVALFLHRGVYGAYELKNDNKCDIFQGKWVYDPKYPLYNASNCPFIEQEFDCRKNGRPDNMYLKYRWKPTSCKLPRFRGGVFLERFRGKRILFVGDSISLNQWQSLTCMLHLAVPKAKYTLIRTGGLSTFSFPAHNVSVMFSRNAFLVDIVGEKSGRVLKLNSISSGDLWKTADVLIFDSWHWWLHTGRKQPSSDWGDRNAKNCIGETRPVMGRSYPGGRHPAEAIVENVVRKISKKVRLLNVTTLSQLRKDGHPSAYGYGGPRATDCSHWCLPGVPDTWNQLLYAVLFPDSN
ccHHHHHHHHHHHHHHHcccccccccccccccccccccEEEEcccccccccccccccccccccccccccccccEEEEEEccccccccccHHHHHHHHcccEEEEEEEcccccHHHHHHHHcccccccccEEEEEEccEEEEEEcccccEEEEEEccEEEEEEccccccEEEEEEcccccccEEccEEEEEcccccEEcccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHccccEEEEEEEcccccccccccccccccccccccccccccccccHHHHHHHHHHccccc
ccHEEEEEEEEEEEccccccccccccccccccccccccEEEEccccccccccccccccccccccHcccccHHHHEEEEcccccccccccHHHHHHHHcccEEEEEcccccHHHHHHHHHHHHHHcccccEEEEEcccEEEEEEEcccEEEEEEEccEEEEEccccccEEEEEccHccccccccccEEEEEcEEEEEcccccccHHHHccccccccccccccccccccccccHHHHHHHHHHHHHccccEEEEEHHHHHHHHHcccccHcccccccccccccccccccccHHHHHHHHHHHcccc
MGSVALAGTLLVVALFLHRgvygayelkndnkcdifqgkwvydpkyplynasncpfieqefdcrkngrpdnmylkyrwkptscklprfrggvflerfrgkrilfvgdsisLNQWQSLTCMLHlavpkakytlirtgglstfsfpahnvsvmfSRNAFLVDIVGEKSGRVLKLnsissgdlwktADVLIFDSWHWwlhtgrkqpssdwgdrnakncigetrpvmgrsypggrhpaEAIVENVVRKISKKVRLLNVTTLSQlrkdghpsaygyggpratdcshwclpgvpdtwNQLLYAVLFPDSN
MGSVALAGTLLVVALFLHRGVYGAYELKNDNKCDIFQGKWVYDPKYPLYNASNCPFIEQEFDCRKNGRPDNMYLKyrwkptscklprfrggvflerFRGKRILFVGDSISLNQWQSLTCMLHLAVPKAKYTLIRTGGLSTFSFPAHNVSVMFSRNAFLVDIVGEKSGRVLKLnsissgdlwKTADVLIFDSWHWWLHTgrkqpssdwgdrnAKNCIGETRPVMGRSYPGGRHPAEAIVENVVRKISKKVRLLnvttlsqlrkdghpsAYGYGGPRATDCSHWCLPGVPDTWNQLLYAVLFPDSN
MGSvalagtllvvalflHRGVYGAYELKNDNKCDIFQGKWVYDPKYPLYNASNCPFIEQEFDCRKNGRPDNMYLKYRWKPTSCKLPRFRGGVFLERFRGKRILFVGDSISLNQWQSLTCMLHLAVPKAKYTLIRTGGLSTFSFPAHNVSVMFSRNAFLVDIVGEKSGRVLKLNSISSGDLWKTADVLIFDSWHWWLHTGRKQPSSDWGDRNAKNCIGETRPVMGRSYPGGRHPAEAIVENVVRKISKKVRLLNVTTLSQLRKDGHPSAYGYGGPRATDCSHWCLPGVPDTWNQLLYAVLFPDSN
***VALAGTLLVVALFLHRGVYGAYELKNDNKCDIFQGKWVYDPKYPLYNASNCPFIEQEFDCRKNGRPDNMYLKYRWKPTSCKLPRFRGGVFLERFRGKRILFVGDSISLNQWQSLTCMLHLAVPKAKYTLIRTGGLSTFSFPAHNVSVMFSRNAFLVDIVGEKSGRVLKLNSISSGDLWKTADVLIFDSWHWWLHTG***************CI*****************AEAIVENVVRKISKKVRLLNVTTLSQLRKDGHPSAYGYGGPRATDCSHWCLPGVPDTWNQLLYAVLF****
*GSVALAGTLLVVAL******************DIFQGKWVYDPKYPLYNASNCPFIEQEFDCRKNGRPDNMYLKYRWKPTSCKLPRFRGGVFLERFRGKRILFVGDSISLNQWQSLTCMLHLAVPKAKYTLIRTGGLSTFSFPAHNVSVMFSRNAFLVDIVGEKSGRVLKLNSISSGDLWKTADVLIFDSWHWWLHTGRKQPSSDWGDRNAKNCIGETRPVMGRSYPGGRHPAEAIVENVVRKISKKVRLLNVTTLSQLRKDGHPSAYGYGGPRATDCSHWCLPGVPDTWNQLLYAVLFP***
MGSVALAGTLLVVALFLHRGVYGAYELKNDNKCDIFQGKWVYDPKYPLYNASNCPFIEQEFDCRKNGRPDNMYLKYRWKPTSCKLPRFRGGVFLERFRGKRILFVGDSISLNQWQSLTCMLHLAVPKAKYTLIRTGGLSTFSFPAHNVSVMFSRNAFLVDIVGEKSGRVLKLNSISSGDLWKTADVLIFDSWHWWLHTGR********DRNAKNCIGETRPVMGRSYPGGRHPAEAIVENVVRKISKKVRLLNVTTLSQLRKDGHPSAYGYGGPRATDCSHWCLPGVPDTWNQLLYAVLFPDSN
MGSVALAGTLLVVALFLHR***********NKCDIFQGKWVYDPKYPLYNASNCPFIEQEFDCRKNGRPDNMYLKYRWKPTSCKLPRFRGGVFLERFRGKRILFVGDSISLNQWQSLTCMLHLAVPKAKYTLIRTGGLSTFSFPAHNVSVMFSRNAFLVDIVGEKSGRVLKLNSISSGDLWKTADVLIFDSWHWWLHTGRKQPSSDWGDRNAKNCIGETRPVMGRSYPGGRHPAEAIVENVVRKISKKVRLLNVTTLSQLRKDGHPSAYGYGGPRATDCSHWCLPGVPDTWNQLLYAVLFPDS*
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHiiiiiiii
SSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MGSVALAGTLLVVALFLHRGVYGAYELKNDNKCDIFQGKWVYDPKYPLYNASNCPFIEQEFDCRKNGRPDNMYLKYRWKPTSCKLPRFRGGVFLERFRGKRILFVGDSISLNQWQSLTCMLHLAVPKAKYTLIRTGGLSTFSFPAHNVSVMFSRNAFLVDIVGEKSGRVLKLNSISSGDLWKTADVLIFDSWHWWLHTGRKQPSSDWGDRNAKNCIGETRPVMGRSYPGGRHPAEAIVENVVRKISKKVRLLNVTTLSQLRKDGHPSAYGYGGPRATDCSHWCLPGVPDTWNQLLYAVLFPDSN
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query304
255551531360 conserved hypothetical protein [Ricinus 0.980 0.827 0.578 1e-112
359485318353 PREDICTED: uncharacterized protein LOC10 0.976 0.841 0.536 1e-105
357459321351 hypothetical protein MTR_3g049330 [Medic 0.980 0.849 0.549 1e-104
356553583355 PREDICTED: uncharacterized protein LOC10 0.878 0.752 0.573 1e-101
302143483 741 unnamed protein product [Vitis vinifera] 0.976 0.400 0.529 1e-98
225446718361 PREDICTED: uncharacterized protein LOC10 0.976 0.822 0.529 2e-98
334184595368 trichome birefringence-like 43 protein [ 0.881 0.728 0.540 2e-97
356567743361 PREDICTED: uncharacterized protein LOC10 0.967 0.814 0.525 2e-97
3201617367 hypothetical protein [Arabidopsis thalia 0.881 0.730 0.540 3e-97
356567386352 PREDICTED: uncharacterized protein LOC10 0.888 0.767 0.544 6e-97
>gi|255551531|ref|XP_002516811.1| conserved hypothetical protein [Ricinus communis] gi|223543899|gb|EEF45425.1| conserved hypothetical protein [Ricinus communis] Back     alignment and taxonomy information
 Score =  411 bits (1057), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 206/356 (57%), Positives = 246/356 (69%), Gaps = 58/356 (16%)

Query: 1   MGSVALAGTLLVVALFLHRGVYGAYELKND---NKCDIFQGKWVYDPKYPLYNASNCPFI 57
           MG++ LA   ++V+L +H+ V+G   + N+   N CD++QG+WVYD  YPLYNAS+CPFI
Sbjct: 1   MGAIGLAALSVLVSL-IHQ-VHGMQSVVNNYHKNGCDLYQGQWVYDASYPLYNASDCPFI 58

Query: 58  EQEFDCRKNGRPDNMYLKYRWKPTSCKLPRFRGGVFLERFRGKRILFVGDSISLNQWQSL 117
            QEF+C+KNGRPD  YL YRWKPTSC+LPRF G  FL + +GK I+FVGDS+SLNQWQSL
Sbjct: 59  LQEFNCQKNGRPDKHYLSYRWKPTSCRLPRFNGKSFLLKMKGKNIMFVGDSLSLNQWQSL 118

Query: 118 TCMLHLAVPKAKYTLIRTGGLSTFSFPAHNVSVMFSRNAFLVDIVGEKSGRVLKLNSISS 177
            CMLH A+P+AKYTL R GGLSTF F  +NVS+M SRNA LVD V EK GRVLKL+SIS+
Sbjct: 119 NCMLHTALPEAKYTLDRVGGLSTFRFTEYNVSLMLSRNALLVDTVEEKIGRVLKLDSISN 178

Query: 178 GDLWKTADVLIFDSWHWWLHTGRKQP---------------------------------- 203
           G+LWK  D LIF+SWHWWLHTGRKQP                                  
Sbjct: 179 GELWKRVDTLIFNSWHWWLHTGRKQPWDFIQEGEKIYKDIDRLVAYEKALRTWARWIQHN 238

Query: 204 -------------------SSDWGDRNAKNCIGETRPVMGRSYPGGRHPAEAIVENVVRK 244
                              S+DWG+ + KNC GET P++  +YPGG+HPAEAIVE V+R 
Sbjct: 239 IDPTKTQVFFQGISPDHENSTDWGNPSRKNCRGETEPLLQPNYPGGKHPAEAIVERVLRT 298

Query: 245 ISKKVRLLNVTTLSQLRKDGHPSAYGYGGPRATDCSHWCLPGVPDTWNQLLYAVLF 300
           ISK V LLN+TTLSQLRKDGHPSAYGYG  +ATDCSHWCL GVPD WN+LLYA L 
Sbjct: 299 ISKPVYLLNITTLSQLRKDGHPSAYGYGDRQATDCSHWCLAGVPDAWNELLYAALI 354




Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359485318|ref|XP_002278078.2| PREDICTED: uncharacterized protein LOC100267770 [Vitis vinifera] Back     alignment and taxonomy information
>gi|357459321|ref|XP_003599941.1| hypothetical protein MTR_3g049330 [Medicago truncatula] gi|355488989|gb|AES70192.1| hypothetical protein MTR_3g049330 [Medicago truncatula] Back     alignment and taxonomy information
>gi|356553583|ref|XP_003545134.1| PREDICTED: uncharacterized protein LOC100799085 [Glycine max] Back     alignment and taxonomy information
>gi|302143483|emb|CBI22044.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|225446718|ref|XP_002282459.1| PREDICTED: uncharacterized protein LOC100262536 [Vitis vinifera] Back     alignment and taxonomy information
>gi|334184595|ref|NP_180647.2| trichome birefringence-like 43 protein [Arabidopsis thaliana] gi|50058955|gb|AAT69222.1| hypothetical protein At2g30900 [Arabidopsis thaliana] gi|330253360|gb|AEC08454.1| trichome birefringence-like 43 protein [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|356567743|ref|XP_003552076.1| PREDICTED: uncharacterized protein LOC100810342 [Glycine max] Back     alignment and taxonomy information
>gi|3201617|gb|AAC20724.1| hypothetical protein [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|356567386|ref|XP_003551901.1| PREDICTED: uncharacterized protein LOC100802364 [Glycine max] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query304
TAIR|locus:2037498359 TBL42 "TRICHOME BIREFRINGENCE- 0.562 0.476 0.582 1.9e-85
TAIR|locus:2041574367 TBL39 "AT2G42570" [Arabidopsis 0.592 0.490 0.566 2.8e-84
TAIR|locus:2029959380 TBL38 "AT1G29050" [Arabidopsis 0.559 0.447 0.543 4.5e-84
TAIR|locus:2099402356 TBL41 "TRICHOME BIREFRINGENCE- 0.562 0.480 0.567 4e-83
TAIR|locus:2055425385 TBL37 "AT2G34070" [Arabidopsis 0.585 0.462 0.513 7.4e-82
TAIR|locus:2055878364 AT2G31110 "AT2G31110" [Arabido 0.582 0.486 0.531 2.8e-78
TAIR|locus:2178813402 PMR5 "AT5G58600" [Arabidopsis 0.572 0.432 0.465 4.8e-66
TAIR|locus:2045688398 TBL45 "AT2G30010" [Arabidopsis 0.562 0.429 0.474 1.4e-64
TAIR|locus:2155874457 TBL4 "AT5G49340" [Arabidopsis 0.562 0.374 0.398 6.9e-55
TAIR|locus:2182157464 TBL11 "TRICHOME BIREFRINGENCE- 0.552 0.362 0.412 1.6e-53
TAIR|locus:2037498 TBL42 "TRICHOME BIREFRINGENCE-LIKE 42" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 558 (201.5 bits), Expect = 1.9e-85, Sum P(2) = 1.9e-85
 Identities = 102/175 (58%), Positives = 127/175 (72%)

Query:    28 KNDNKCDIFQGKWVYD-PKYPLYNASNCPFIEQEFDCRKNGRPDNMYLKYRWKPTSCKLP 86
             KN  KC+I+QG+W+YD    PLY  S CPFI    DC+K GRPD  YL YRW+PT C +P
Sbjct:    33 KNATKCNIYQGRWIYDNSSNPLYGTSTCPFIG--LDCQKFGRPDKNYLHYRWQPTGCDIP 90

Query:    87 RFRGGVFLERFRGKRILFVGDSISLNQWQSLTCMLHLAVPKAKYTLIRTGGLSTFSFPAH 146
             RF G  FL RF+GK+ILFVGDS+S N W SL+CMLH AVP AKYT     GLSTF+ P +
Sbjct:    91 RFNGRDFLTRFKGKKILFVGDSLSNNMWVSLSCMLHAAVPNAKYTFQLNKGLSTFTIPEY 150

Query:   147 NVSVMFSRNAFLVDIVGEKS-GRVLKLNSISSGDLWKTADVLIFDSWHWWLHTGR 200
              +SV F +N FLVD+V +K+ G +LKL+SIS G+ W  +DV IF+++HWW HTGR
Sbjct:   151 GISVNFLKNGFLVDLVSDKTRGLILKLDSISRGNQWLGSDVAIFNTFHWWSHTGR 205


GO:0005576 "extracellular region" evidence=ISM
GO:0008150 "biological_process" evidence=ND
TAIR|locus:2041574 TBL39 "AT2G42570" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2029959 TBL38 "AT1G29050" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2099402 TBL41 "TRICHOME BIREFRINGENCE-LIKE 41" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2055425 TBL37 "AT2G34070" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2055878 AT2G31110 "AT2G31110" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2178813 PMR5 "AT5G58600" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2045688 TBL45 "AT2G30010" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2155874 TBL4 "AT5G49340" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2182157 TBL11 "TRICHOME BIREFRINGENCE-LIKE 11" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Fail to connect to STRING server


Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query304
PLN02629387 PLN02629, PLN02629, powdery mildew resistance 5 5e-88
pfam13839270 pfam13839, PC-Esterase, GDSL/SGNH-like Acyl-Estera 2e-75
pfam1441655 pfam14416, PMR5N, PMR5 N terminal Domain 8e-28
>gnl|CDD|215338 PLN02629, PLN02629, powdery mildew resistance 5 Back     alignment and domain information
 Score =  267 bits (685), Expect = 5e-88
 Identities = 136/338 (40%), Positives = 185/338 (54%), Gaps = 66/338 (19%)

Query: 29  NDNKCDIFQGKWVYDPKYPLYNASNCP-FIEQEFDCRKNGRPDNMYLKYRWKPTSCKLPR 87
           N + C +F G WV D  YPLY +S+CP  I+ EF+C+  GRPD+ YLKYRW+P +C+LPR
Sbjct: 49  NQSTCALFVGTWVRDDSYPLYQSSDCPGVIDPEFNCQMYGRPDSDYLKYRWQPLNCELPR 108

Query: 88  FRGGVFLERFRGKRILFVGDSISLNQWQSLTCMLHLAVPKAKYTLIRTGGLSTFSFPAHN 147
           F G  FL + +GK ++FVGDS+  NQW+SL C++  +VP  +  + R   LSTF F  + 
Sbjct: 109 FNGLEFLLKMKGKTVMFVGDSLGRNQWESLICLISSSVPSTRTQMSRGDPLSTFKFLDYG 168

Query: 148 VSVMFSRNAFLVDIVGEKSGRVLKLNSIS-SGDLWKTADVLIFDS--------------- 191
           VS+ F +  +LVDI   +  RVLKL  IS + + W+ ADVLIF++               
Sbjct: 169 VSISFYKAPYLVDIDAVQGKRVLKLEEISGNANAWRDADVLIFNTGHWWSHQGSLQGWDY 228

Query: 192 -----------------------WHWWLHTG----RKQ-------PS----SDWGDRNA- 212
                                  W +W+ T     R +       P+    S+W    + 
Sbjct: 229 IESGGTYYQDMDRLVALEKALRTWAYWVDTNVDRSRTRVFFQSISPTHYNPSEWSAGAST 288

Query: 213 --KNCIGETRPVMGRSYPGGRHPAEAIVENVVRKISKKVRLLNVTTLSQLRKDGHPSAY- 269
             KNC GET P+ G +YPG       +V+ V+R +     LL++T LS+LRKDGHPS Y 
Sbjct: 289 TTKNCYGETTPMSGMTYPGAYPDQMRVVDEVIRGMHNPAYLLDITLLSELRKDGHPSIYS 348

Query: 270 GYGGP-------RATDCSHWCLPGVPDTWNQLLYAVLF 300
           G   P       R+ DCSHWCLPG+PDTWNQL Y  LF
Sbjct: 349 GDLSPSQRANPDRSADCSHWCLPGLPDTWNQLFYTALF 386


Length = 387

>gnl|CDD|222410 pfam13839, PC-Esterase, GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p Back     alignment and domain information
>gnl|CDD|206583 pfam14416, PMR5N, PMR5 N terminal Domain Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 304
PLN02629387 powdery mildew resistance 5 100.0
PF13839263 PC-Esterase: GDSL/SGNH-like Acyl-Esterase family f 100.0
PF1441655 PMR5N: PMR5 N terminal Domain 99.95
cd01842183 SGNH_hydrolase_like_5 SGNH_hydrolase subfamily. SG 96.18
>PLN02629 powdery mildew resistance 5 Back     alignment and domain information
Probab=100.00  E-value=4.4e-102  Score=745.32  Aligned_cols=274  Identities=49%  Similarity=0.994  Sum_probs=248.7

Q ss_pred             CCCCCCCCCccCeeeeCCCCCCCCCCCCC-CcccccccccCCCCCCcCcceeeecCCCCCCCCChHHHHHHhcCCcEEEE
Q 021968           27 LKNDNKCDIFQGKWVYDPKYPLYNASNCP-FIEQEFDCRKNGRPDNMYLKYRWKPTSCKLPRFRGGVFLERFRGKRILFV  105 (304)
Q Consensus        27 ~~~~~~Cd~~~G~WV~d~~~p~Y~~~~Cp-~i~~~~~C~~nGRpD~~y~~WrWqP~~C~Lp~fd~~~fl~~lrgkri~FV  105 (304)
                      ..+++.||+|+|+||+|+++|+|++++|| ||+++|||++|||||++|++|||||++|+||||||.+|||+|||||||||
T Consensus        47 ~~~~~~CD~f~G~WV~D~s~PlY~~~~Cp~fi~~~~nC~knGRPD~~Yl~WRWqP~gC~LPRFda~~fLe~~RgKrl~FV  126 (387)
T PLN02629         47 QANQSTCALFVGTWVRDDSYPLYQSSDCPGVIDPEFNCQMYGRPDSDYLKYRWQPLNCELPRFNGLEFLLKMKGKTVMFV  126 (387)
T ss_pred             CCCccccCCCCCeEecCCCCCCCCCCCCccccccccchhhcCCCCcchhhccccCCCCCCCCcCHHHHHHHhcCCeEEEe
Confidence            45678899999999999999999999999 99999999999999999999999999999999999999999999999999


Q ss_pred             echhhHHHHHHHHHHhhhcCCCCceEEeecCceEEEEeccCceEEEEEeeceeeeeccccccceEEeccCCCC-CCCccc
Q 021968          106 GDSISLNQWQSLTCMLHLAVPKAKYTLIRTGGLSTFSFPAHNVSVMFSRNAFLVDIVGEKSGRVLKLNSISSG-DLWKTA  184 (304)
Q Consensus       106 GDSl~Rnq~~SL~ClL~~~~~~~~~~~~~~~~~~~~~f~~~n~tv~f~wsPfLv~~~~~~~~~~l~ld~~~~~-~~w~~~  184 (304)
                      ||||+|||||||+|||++++|+.++...+.++..+|+|++||+||+||||||||+.+..+..++|++|.++.. +.|+++
T Consensus       127 GDSL~RNQ~eSLvClL~~~~p~~~~~~~~~~~~~~~~F~~yN~TV~~ywspfLV~~~~~~~~~~l~LD~id~~a~~w~~~  206 (387)
T PLN02629        127 GDSLGRNQWESLICLISSSVPSTRTQMSRGDPLSTFKFLDYGVSISFYKAPYLVDIDAVQGKRVLKLEEISGNANAWRDA  206 (387)
T ss_pred             ccccchhHHHHHHHHhhccCCCCceeeecCCceEEEEeccCCEEEEEEecceEEeeecCCCceeEEecCcchhhhhhccC
Confidence            9999999999999999999987766666677889999999999999999999999887666689999999865 889999


Q ss_pred             cEEEEeccccccccCCCCCC-----------------------------------------------------CCCCCCC
Q 021968          185 DVLIFDSWHWWLHTGRKQPS-----------------------------------------------------SDWGDRN  211 (304)
Q Consensus       185 DvlV~nsG~W~~~~~~~~~~-----------------------------------------------------g~W~~g~  211 (304)
                      |||||||||||.+++..++|                                                     |+|++|+
T Consensus       207 DvlVfntghWw~~~~~~~~~~~~~~g~~~~~~~~~~~A~r~al~T~~~wv~~~~~~~kt~vffrT~SP~Hfe~g~Wn~gg  286 (387)
T PLN02629        207 DVLIFNTGHWWSHQGSLQGWDYIESGGTYYQDMDRLVALEKALRTWAYWVDTNVDRSRTRVFFQSISPTHYNPSEWSAGA  286 (387)
T ss_pred             CEEEEeCccccCCCCeeEEeeeeccCCccccCccHHHHHHHHHHHHHHHHHhcCCCCCcEEEEEecCcccccCCCcCCCC
Confidence            99999999999987643211                                                     8999873


Q ss_pred             ---CCCCCCCcccCCCCCCCCCCChHHHHHHHHHHhhcCceEEeecccccccccCCCCCCCCCC--------CCCCCCcc
Q 021968          212 ---AKNCIGETRPVMGRSYPGGRHPAEAIVENVVRKISKKVRLLNVTTLSQLRKDGHPSAYGYG--------GPRATDCS  280 (304)
Q Consensus       212 ---~g~C~~~T~P~~~~~~~~~~~~~~~~v~~~~~~~~~~v~lLdiT~ls~~R~DgHpg~y~~g--------~~~~~DC~  280 (304)
                         +|+|+++|+|+.++++.++.+.+++++++++++++.+|+|||||+||++|||||||+|+..        ...++||+
T Consensus       287 ~~~~~~C~~et~P~~~~~~~~~~~~~~~~ve~v~~~~~~~v~lLDIT~ls~lR~DgHPs~Y~~~~~~~~~~~p~~~~DC~  366 (387)
T PLN02629        287 STTTKNCYGETTPMSGMTYPGAYPDQMRVVDEVIRGMHNPAYLLDITLLSELRKDGHPSIYSGDLSPSQRANPDRSADCS  366 (387)
T ss_pred             CCCCCCCccCCccCcCccccCcchHHHHHHHHHHHhcCCceEEEechhhhhcCCCCCcccccCCCchhhccCCCCCCCcc
Confidence               3689999999997777777777888999999999999999999999999999999999632        12468999


Q ss_pred             ccccCCccchHHHHHHHHhC
Q 021968          281 HWCLPGVPDTWNQLLYAVLF  300 (304)
Q Consensus       281 HWCLPGv~DtWNelL~~~L~  300 (304)
                      ||||||||||||||||++|+
T Consensus       367 HWCLPGvpDTWNelL~a~L~  386 (387)
T PLN02629        367 HWCLPGLPDTWNQLFYTALF  386 (387)
T ss_pred             cccCCCCCccHHHHHHHHHh
Confidence            99999999999999999996



>PF13839 PC-Esterase: GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p Back     alignment and domain information
>PF14416 PMR5N: PMR5 N terminal Domain Back     alignment and domain information
>cd01842 SGNH_hydrolase_like_5 SGNH_hydrolase subfamily Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

No hit with e-value below 0.005

Structure Templates Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query304
4h08_A200 Putative hydrolase; GDSL-like lipase/acylhydrolase 86.04
4hf7_A209 Putative acylhydrolase; PF13472 family, structural 82.17
>4h08_A Putative hydrolase; GDSL-like lipase/acylhydrolase family protein, structural GE joint center for structural genomics, JCSG; HET: GOL; 1.80A {Bacteroides thetaiotaomicron} Back     alignment and structure
Probab=86.04  E-value=0.78  Score=38.07  Aligned_cols=36  Identities=28%  Similarity=0.707  Sum_probs=23.7

Q ss_pred             cCcce--eeecC--CCCCCCCChHHHHHHhcCCcEEEEechhhHHHHHHHHHHh
Q 021968           72 MYLKY--RWKPT--SCKLPRFRGGVFLERFRGKRILFVGDSISLNQWQSLTCML  121 (304)
Q Consensus        72 ~y~~W--rWqP~--~C~Lp~fd~~~fl~~lrgkri~FVGDSl~Rnq~~SL~ClL  121 (304)
                      +|..|  .|.|.  .=++|              ||+|+||||+..-...|..+|
T Consensus         3 ~~~ew~~~~~p~~~~~~~p--------------rVl~iGDSit~G~~~~l~~~l   42 (200)
T 4h08_A            3 EYIEWSDIWIPGANKTDLP--------------HVLLIGNSITRGYYGKVEAAL   42 (200)
T ss_dssp             SSCCCEEEECTTTTCCSSC--------------EEEEEESHHHHHHHHHHHHHT
T ss_pred             ceeehhhhccCCcccCCCC--------------eEEEEchhHHhhhHHHHHHHh
Confidence            57777  48775  33343              699999999986433444444



>4hf7_A Putative acylhydrolase; PF13472 family, structural genomics, joint center for struct genomics, JCSG, protein structure initiative; HET: OSE; 1.77A {Bacteroides thetaiotaomicron} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query304
d3bzwa1248 Uncharacterized protein BT2961 {Bacteroides thetai 89.03
d3dc7a1207 Uncharacterized protein Lp3323 {Lactobacillus plan 88.22
d1pvva2163 Ornithine transcarbamoylase {Archaeon Pyrococcus f 84.98
d1otha2170 Ornithine transcarbamoylase {Human (Homo sapiens) 80.17
>d3bzwa1 c.23.10.9 (A:38-285) Uncharacterized protein BT2961 {Bacteroides thetaiotaomicron [TaxId: 818]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: SGNH hydrolase
family: BT2961-like
domain: Uncharacterized protein BT2961
species: Bacteroides thetaiotaomicron [TaxId: 818]
Probab=89.03  E-value=0.066  Score=42.06  Aligned_cols=15  Identities=40%  Similarity=0.778  Sum_probs=13.2

Q ss_pred             cCCcEEEEechhhHH
Q 021968           98 RGKRILFVGDSISLN  112 (304)
Q Consensus        98 rgkri~FVGDSl~Rn  112 (304)
                      .||||+|+|||++-.
T Consensus         7 ~~kkI~~~GDS~T~g   21 (248)
T d3bzwa1           7 QGKKVGYIGDSITDP   21 (248)
T ss_dssp             TTCEEEEEESTTTCT
T ss_pred             CCCEEEEEehHHccC
Confidence            699999999999853



>d3dc7a1 c.23.10.9 (A:18-224) Uncharacterized protein Lp3323 {Lactobacillus plantarum [TaxId: 1590]} Back     information, alignment and structure
>d1pvva2 c.78.1.1 (A:151-313) Ornithine transcarbamoylase {Archaeon Pyrococcus furiosus [TaxId: 2261]} Back     information, alignment and structure
>d1otha2 c.78.1.1 (A:185-354) Ornithine transcarbamoylase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure