Citrus Sinensis ID: 021968
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 304 | ||||||
| 255551531 | 360 | conserved hypothetical protein [Ricinus | 0.980 | 0.827 | 0.578 | 1e-112 | |
| 359485318 | 353 | PREDICTED: uncharacterized protein LOC10 | 0.976 | 0.841 | 0.536 | 1e-105 | |
| 357459321 | 351 | hypothetical protein MTR_3g049330 [Medic | 0.980 | 0.849 | 0.549 | 1e-104 | |
| 356553583 | 355 | PREDICTED: uncharacterized protein LOC10 | 0.878 | 0.752 | 0.573 | 1e-101 | |
| 302143483 | 741 | unnamed protein product [Vitis vinifera] | 0.976 | 0.400 | 0.529 | 1e-98 | |
| 225446718 | 361 | PREDICTED: uncharacterized protein LOC10 | 0.976 | 0.822 | 0.529 | 2e-98 | |
| 334184595 | 368 | trichome birefringence-like 43 protein [ | 0.881 | 0.728 | 0.540 | 2e-97 | |
| 356567743 | 361 | PREDICTED: uncharacterized protein LOC10 | 0.967 | 0.814 | 0.525 | 2e-97 | |
| 3201617 | 367 | hypothetical protein [Arabidopsis thalia | 0.881 | 0.730 | 0.540 | 3e-97 | |
| 356567386 | 352 | PREDICTED: uncharacterized protein LOC10 | 0.888 | 0.767 | 0.544 | 6e-97 |
| >gi|255551531|ref|XP_002516811.1| conserved hypothetical protein [Ricinus communis] gi|223543899|gb|EEF45425.1| conserved hypothetical protein [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 411 bits (1057), Expect = e-112, Method: Compositional matrix adjust.
Identities = 206/356 (57%), Positives = 246/356 (69%), Gaps = 58/356 (16%)
Query: 1 MGSVALAGTLLVVALFLHRGVYGAYELKND---NKCDIFQGKWVYDPKYPLYNASNCPFI 57
MG++ LA ++V+L +H+ V+G + N+ N CD++QG+WVYD YPLYNAS+CPFI
Sbjct: 1 MGAIGLAALSVLVSL-IHQ-VHGMQSVVNNYHKNGCDLYQGQWVYDASYPLYNASDCPFI 58
Query: 58 EQEFDCRKNGRPDNMYLKYRWKPTSCKLPRFRGGVFLERFRGKRILFVGDSISLNQWQSL 117
QEF+C+KNGRPD YL YRWKPTSC+LPRF G FL + +GK I+FVGDS+SLNQWQSL
Sbjct: 59 LQEFNCQKNGRPDKHYLSYRWKPTSCRLPRFNGKSFLLKMKGKNIMFVGDSLSLNQWQSL 118
Query: 118 TCMLHLAVPKAKYTLIRTGGLSTFSFPAHNVSVMFSRNAFLVDIVGEKSGRVLKLNSISS 177
CMLH A+P+AKYTL R GGLSTF F +NVS+M SRNA LVD V EK GRVLKL+SIS+
Sbjct: 119 NCMLHTALPEAKYTLDRVGGLSTFRFTEYNVSLMLSRNALLVDTVEEKIGRVLKLDSISN 178
Query: 178 GDLWKTADVLIFDSWHWWLHTGRKQP---------------------------------- 203
G+LWK D LIF+SWHWWLHTGRKQP
Sbjct: 179 GELWKRVDTLIFNSWHWWLHTGRKQPWDFIQEGEKIYKDIDRLVAYEKALRTWARWIQHN 238
Query: 204 -------------------SSDWGDRNAKNCIGETRPVMGRSYPGGRHPAEAIVENVVRK 244
S+DWG+ + KNC GET P++ +YPGG+HPAEAIVE V+R
Sbjct: 239 IDPTKTQVFFQGISPDHENSTDWGNPSRKNCRGETEPLLQPNYPGGKHPAEAIVERVLRT 298
Query: 245 ISKKVRLLNVTTLSQLRKDGHPSAYGYGGPRATDCSHWCLPGVPDTWNQLLYAVLF 300
ISK V LLN+TTLSQLRKDGHPSAYGYG +ATDCSHWCL GVPD WN+LLYA L
Sbjct: 299 ISKPVYLLNITTLSQLRKDGHPSAYGYGDRQATDCSHWCLAGVPDAWNELLYAALI 354
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|359485318|ref|XP_002278078.2| PREDICTED: uncharacterized protein LOC100267770 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
| >gi|357459321|ref|XP_003599941.1| hypothetical protein MTR_3g049330 [Medicago truncatula] gi|355488989|gb|AES70192.1| hypothetical protein MTR_3g049330 [Medicago truncatula] | Back alignment and taxonomy information |
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| >gi|356553583|ref|XP_003545134.1| PREDICTED: uncharacterized protein LOC100799085 [Glycine max] | Back alignment and taxonomy information |
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| >gi|302143483|emb|CBI22044.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|225446718|ref|XP_002282459.1| PREDICTED: uncharacterized protein LOC100262536 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
| >gi|334184595|ref|NP_180647.2| trichome birefringence-like 43 protein [Arabidopsis thaliana] gi|50058955|gb|AAT69222.1| hypothetical protein At2g30900 [Arabidopsis thaliana] gi|330253360|gb|AEC08454.1| trichome birefringence-like 43 protein [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
| >gi|356567743|ref|XP_003552076.1| PREDICTED: uncharacterized protein LOC100810342 [Glycine max] | Back alignment and taxonomy information |
|---|
| >gi|3201617|gb|AAC20724.1| hypothetical protein [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
| >gi|356567386|ref|XP_003551901.1| PREDICTED: uncharacterized protein LOC100802364 [Glycine max] | Back alignment and taxonomy information |
|---|
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 304 | ||||||
| TAIR|locus:2037498 | 359 | TBL42 "TRICHOME BIREFRINGENCE- | 0.562 | 0.476 | 0.582 | 1.9e-85 | |
| TAIR|locus:2041574 | 367 | TBL39 "AT2G42570" [Arabidopsis | 0.592 | 0.490 | 0.566 | 2.8e-84 | |
| TAIR|locus:2029959 | 380 | TBL38 "AT1G29050" [Arabidopsis | 0.559 | 0.447 | 0.543 | 4.5e-84 | |
| TAIR|locus:2099402 | 356 | TBL41 "TRICHOME BIREFRINGENCE- | 0.562 | 0.480 | 0.567 | 4e-83 | |
| TAIR|locus:2055425 | 385 | TBL37 "AT2G34070" [Arabidopsis | 0.585 | 0.462 | 0.513 | 7.4e-82 | |
| TAIR|locus:2055878 | 364 | AT2G31110 "AT2G31110" [Arabido | 0.582 | 0.486 | 0.531 | 2.8e-78 | |
| TAIR|locus:2178813 | 402 | PMR5 "AT5G58600" [Arabidopsis | 0.572 | 0.432 | 0.465 | 4.8e-66 | |
| TAIR|locus:2045688 | 398 | TBL45 "AT2G30010" [Arabidopsis | 0.562 | 0.429 | 0.474 | 1.4e-64 | |
| TAIR|locus:2155874 | 457 | TBL4 "AT5G49340" [Arabidopsis | 0.562 | 0.374 | 0.398 | 6.9e-55 | |
| TAIR|locus:2182157 | 464 | TBL11 "TRICHOME BIREFRINGENCE- | 0.552 | 0.362 | 0.412 | 1.6e-53 |
| TAIR|locus:2037498 TBL42 "TRICHOME BIREFRINGENCE-LIKE 42" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 558 (201.5 bits), Expect = 1.9e-85, Sum P(2) = 1.9e-85
Identities = 102/175 (58%), Positives = 127/175 (72%)
Query: 28 KNDNKCDIFQGKWVYD-PKYPLYNASNCPFIEQEFDCRKNGRPDNMYLKYRWKPTSCKLP 86
KN KC+I+QG+W+YD PLY S CPFI DC+K GRPD YL YRW+PT C +P
Sbjct: 33 KNATKCNIYQGRWIYDNSSNPLYGTSTCPFIG--LDCQKFGRPDKNYLHYRWQPTGCDIP 90
Query: 87 RFRGGVFLERFRGKRILFVGDSISLNQWQSLTCMLHLAVPKAKYTLIRTGGLSTFSFPAH 146
RF G FL RF+GK+ILFVGDS+S N W SL+CMLH AVP AKYT GLSTF+ P +
Sbjct: 91 RFNGRDFLTRFKGKKILFVGDSLSNNMWVSLSCMLHAAVPNAKYTFQLNKGLSTFTIPEY 150
Query: 147 NVSVMFSRNAFLVDIVGEKS-GRVLKLNSISSGDLWKTADVLIFDSWHWWLHTGR 200
+SV F +N FLVD+V +K+ G +LKL+SIS G+ W +DV IF+++HWW HTGR
Sbjct: 151 GISVNFLKNGFLVDLVSDKTRGLILKLDSISRGNQWLGSDVAIFNTFHWWSHTGR 205
|
|
| TAIR|locus:2041574 TBL39 "AT2G42570" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2029959 TBL38 "AT1G29050" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2099402 TBL41 "TRICHOME BIREFRINGENCE-LIKE 41" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2055425 TBL37 "AT2G34070" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2055878 AT2G31110 "AT2G31110" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2178813 PMR5 "AT5G58600" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2045688 TBL45 "AT2G30010" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2155874 TBL4 "AT5G49340" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2182157 TBL11 "TRICHOME BIREFRINGENCE-LIKE 11" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 304 | |||
| PLN02629 | 387 | PLN02629, PLN02629, powdery mildew resistance 5 | 5e-88 | |
| pfam13839 | 270 | pfam13839, PC-Esterase, GDSL/SGNH-like Acyl-Estera | 2e-75 | |
| pfam14416 | 55 | pfam14416, PMR5N, PMR5 N terminal Domain | 8e-28 |
| >gnl|CDD|215338 PLN02629, PLN02629, powdery mildew resistance 5 | Back alignment and domain information |
|---|
Score = 267 bits (685), Expect = 5e-88
Identities = 136/338 (40%), Positives = 185/338 (54%), Gaps = 66/338 (19%)
Query: 29 NDNKCDIFQGKWVYDPKYPLYNASNCP-FIEQEFDCRKNGRPDNMYLKYRWKPTSCKLPR 87
N + C +F G WV D YPLY +S+CP I+ EF+C+ GRPD+ YLKYRW+P +C+LPR
Sbjct: 49 NQSTCALFVGTWVRDDSYPLYQSSDCPGVIDPEFNCQMYGRPDSDYLKYRWQPLNCELPR 108
Query: 88 FRGGVFLERFRGKRILFVGDSISLNQWQSLTCMLHLAVPKAKYTLIRTGGLSTFSFPAHN 147
F G FL + +GK ++FVGDS+ NQW+SL C++ +VP + + R LSTF F +
Sbjct: 109 FNGLEFLLKMKGKTVMFVGDSLGRNQWESLICLISSSVPSTRTQMSRGDPLSTFKFLDYG 168
Query: 148 VSVMFSRNAFLVDIVGEKSGRVLKLNSIS-SGDLWKTADVLIFDS--------------- 191
VS+ F + +LVDI + RVLKL IS + + W+ ADVLIF++
Sbjct: 169 VSISFYKAPYLVDIDAVQGKRVLKLEEISGNANAWRDADVLIFNTGHWWSHQGSLQGWDY 228
Query: 192 -----------------------WHWWLHTG----RKQ-------PS----SDWGDRNA- 212
W +W+ T R + P+ S+W +
Sbjct: 229 IESGGTYYQDMDRLVALEKALRTWAYWVDTNVDRSRTRVFFQSISPTHYNPSEWSAGAST 288
Query: 213 --KNCIGETRPVMGRSYPGGRHPAEAIVENVVRKISKKVRLLNVTTLSQLRKDGHPSAY- 269
KNC GET P+ G +YPG +V+ V+R + LL++T LS+LRKDGHPS Y
Sbjct: 289 TTKNCYGETTPMSGMTYPGAYPDQMRVVDEVIRGMHNPAYLLDITLLSELRKDGHPSIYS 348
Query: 270 GYGGP-------RATDCSHWCLPGVPDTWNQLLYAVLF 300
G P R+ DCSHWCLPG+PDTWNQL Y LF
Sbjct: 349 GDLSPSQRANPDRSADCSHWCLPGLPDTWNQLFYTALF 386
|
Length = 387 |
| >gnl|CDD|222410 pfam13839, PC-Esterase, GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p | Back alignment and domain information |
|---|
| >gnl|CDD|206583 pfam14416, PMR5N, PMR5 N terminal Domain | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 304 | |||
| PLN02629 | 387 | powdery mildew resistance 5 | 100.0 | |
| PF13839 | 263 | PC-Esterase: GDSL/SGNH-like Acyl-Esterase family f | 100.0 | |
| PF14416 | 55 | PMR5N: PMR5 N terminal Domain | 99.95 | |
| cd01842 | 183 | SGNH_hydrolase_like_5 SGNH_hydrolase subfamily. SG | 96.18 |
| >PLN02629 powdery mildew resistance 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-102 Score=745.32 Aligned_cols=274 Identities=49% Similarity=0.994 Sum_probs=248.7
Q ss_pred CCCCCCCCCccCeeeeCCCCCCCCCCCCC-CcccccccccCCCCCCcCcceeeecCCCCCCCCChHHHHHHhcCCcEEEE
Q 021968 27 LKNDNKCDIFQGKWVYDPKYPLYNASNCP-FIEQEFDCRKNGRPDNMYLKYRWKPTSCKLPRFRGGVFLERFRGKRILFV 105 (304)
Q Consensus 27 ~~~~~~Cd~~~G~WV~d~~~p~Y~~~~Cp-~i~~~~~C~~nGRpD~~y~~WrWqP~~C~Lp~fd~~~fl~~lrgkri~FV 105 (304)
..+++.||+|+|+||+|+++|+|++++|| ||+++|||++|||||++|++|||||++|+||||||.+|||+|||||||||
T Consensus 47 ~~~~~~CD~f~G~WV~D~s~PlY~~~~Cp~fi~~~~nC~knGRPD~~Yl~WRWqP~gC~LPRFda~~fLe~~RgKrl~FV 126 (387)
T PLN02629 47 QANQSTCALFVGTWVRDDSYPLYQSSDCPGVIDPEFNCQMYGRPDSDYLKYRWQPLNCELPRFNGLEFLLKMKGKTVMFV 126 (387)
T ss_pred CCCccccCCCCCeEecCCCCCCCCCCCCccccccccchhhcCCCCcchhhccccCCCCCCCCcCHHHHHHHhcCCeEEEe
Confidence 45678899999999999999999999999 99999999999999999999999999999999999999999999999999
Q ss_pred echhhHHHHHHHHHHhhhcCCCCceEEeecCceEEEEeccCceEEEEEeeceeeeeccccccceEEeccCCCC-CCCccc
Q 021968 106 GDSISLNQWQSLTCMLHLAVPKAKYTLIRTGGLSTFSFPAHNVSVMFSRNAFLVDIVGEKSGRVLKLNSISSG-DLWKTA 184 (304)
Q Consensus 106 GDSl~Rnq~~SL~ClL~~~~~~~~~~~~~~~~~~~~~f~~~n~tv~f~wsPfLv~~~~~~~~~~l~ld~~~~~-~~w~~~ 184 (304)
||||+|||||||+|||++++|+.++...+.++..+|+|++||+||+||||||||+.+..+..++|++|.++.. +.|+++
T Consensus 127 GDSL~RNQ~eSLvClL~~~~p~~~~~~~~~~~~~~~~F~~yN~TV~~ywspfLV~~~~~~~~~~l~LD~id~~a~~w~~~ 206 (387)
T PLN02629 127 GDSLGRNQWESLICLISSSVPSTRTQMSRGDPLSTFKFLDYGVSISFYKAPYLVDIDAVQGKRVLKLEEISGNANAWRDA 206 (387)
T ss_pred ccccchhHHHHHHHHhhccCCCCceeeecCCceEEEEeccCCEEEEEEecceEEeeecCCCceeEEecCcchhhhhhccC
Confidence 9999999999999999999987766666677889999999999999999999999887666689999999865 889999
Q ss_pred cEEEEeccccccccCCCCCC-----------------------------------------------------CCCCCCC
Q 021968 185 DVLIFDSWHWWLHTGRKQPS-----------------------------------------------------SDWGDRN 211 (304)
Q Consensus 185 DvlV~nsG~W~~~~~~~~~~-----------------------------------------------------g~W~~g~ 211 (304)
|||||||||||.+++..++| |+|++|+
T Consensus 207 DvlVfntghWw~~~~~~~~~~~~~~g~~~~~~~~~~~A~r~al~T~~~wv~~~~~~~kt~vffrT~SP~Hfe~g~Wn~gg 286 (387)
T PLN02629 207 DVLIFNTGHWWSHQGSLQGWDYIESGGTYYQDMDRLVALEKALRTWAYWVDTNVDRSRTRVFFQSISPTHYNPSEWSAGA 286 (387)
T ss_pred CEEEEeCccccCCCCeeEEeeeeccCCccccCccHHHHHHHHHHHHHHHHHhcCCCCCcEEEEEecCcccccCCCcCCCC
Confidence 99999999999987643211 8999873
Q ss_pred ---CCCCCCCcccCCCCCCCCCCChHHHHHHHHHHhhcCceEEeecccccccccCCCCCCCCCC--------CCCCCCcc
Q 021968 212 ---AKNCIGETRPVMGRSYPGGRHPAEAIVENVVRKISKKVRLLNVTTLSQLRKDGHPSAYGYG--------GPRATDCS 280 (304)
Q Consensus 212 ---~g~C~~~T~P~~~~~~~~~~~~~~~~v~~~~~~~~~~v~lLdiT~ls~~R~DgHpg~y~~g--------~~~~~DC~ 280 (304)
+|+|+++|+|+.++++.++.+.+++++++++++++.+|+|||||+||++|||||||+|+.. ...++||+
T Consensus 287 ~~~~~~C~~et~P~~~~~~~~~~~~~~~~ve~v~~~~~~~v~lLDIT~ls~lR~DgHPs~Y~~~~~~~~~~~p~~~~DC~ 366 (387)
T PLN02629 287 STTTKNCYGETTPMSGMTYPGAYPDQMRVVDEVIRGMHNPAYLLDITLLSELRKDGHPSIYSGDLSPSQRANPDRSADCS 366 (387)
T ss_pred CCCCCCCccCCccCcCccccCcchHHHHHHHHHHHhcCCceEEEechhhhhcCCCCCcccccCCCchhhccCCCCCCCcc
Confidence 3689999999997777777777888999999999999999999999999999999999632 12468999
Q ss_pred ccccCCccchHHHHHHHHhC
Q 021968 281 HWCLPGVPDTWNQLLYAVLF 300 (304)
Q Consensus 281 HWCLPGv~DtWNelL~~~L~ 300 (304)
||||||||||||||||++|+
T Consensus 367 HWCLPGvpDTWNelL~a~L~ 386 (387)
T PLN02629 367 HWCLPGLPDTWNQLFYTALF 386 (387)
T ss_pred cccCCCCCccHHHHHHHHHh
Confidence 99999999999999999996
|
|
| >PF13839 PC-Esterase: GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p | Back alignment and domain information |
|---|
| >PF14416 PMR5N: PMR5 N terminal Domain | Back alignment and domain information |
|---|
| >cd01842 SGNH_hydrolase_like_5 SGNH_hydrolase subfamily | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
No hit with e-value below 0.005
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 304 | |||
| 4h08_A | 200 | Putative hydrolase; GDSL-like lipase/acylhydrolase | 86.04 | |
| 4hf7_A | 209 | Putative acylhydrolase; PF13472 family, structural | 82.17 |
| >4h08_A Putative hydrolase; GDSL-like lipase/acylhydrolase family protein, structural GE joint center for structural genomics, JCSG; HET: GOL; 1.80A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=86.04 E-value=0.78 Score=38.07 Aligned_cols=36 Identities=28% Similarity=0.707 Sum_probs=23.7
Q ss_pred cCcce--eeecC--CCCCCCCChHHHHHHhcCCcEEEEechhhHHHHHHHHHHh
Q 021968 72 MYLKY--RWKPT--SCKLPRFRGGVFLERFRGKRILFVGDSISLNQWQSLTCML 121 (304)
Q Consensus 72 ~y~~W--rWqP~--~C~Lp~fd~~~fl~~lrgkri~FVGDSl~Rnq~~SL~ClL 121 (304)
+|..| .|.|. .=++| ||+|+||||+..-...|..+|
T Consensus 3 ~~~ew~~~~~p~~~~~~~p--------------rVl~iGDSit~G~~~~l~~~l 42 (200)
T 4h08_A 3 EYIEWSDIWIPGANKTDLP--------------HVLLIGNSITRGYYGKVEAAL 42 (200)
T ss_dssp SSCCCEEEECTTTTCCSSC--------------EEEEEESHHHHHHHHHHHHHT
T ss_pred ceeehhhhccCCcccCCCC--------------eEEEEchhHHhhhHHHHHHHh
Confidence 57777 48775 33343 699999999986433444444
|
| >4hf7_A Putative acylhydrolase; PF13472 family, structural genomics, joint center for struct genomics, JCSG, protein structure initiative; HET: OSE; 1.77A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
No hit with e-value below 0.005
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 304 | |||
| d3bzwa1 | 248 | Uncharacterized protein BT2961 {Bacteroides thetai | 89.03 | |
| d3dc7a1 | 207 | Uncharacterized protein Lp3323 {Lactobacillus plan | 88.22 | |
| d1pvva2 | 163 | Ornithine transcarbamoylase {Archaeon Pyrococcus f | 84.98 | |
| d1otha2 | 170 | Ornithine transcarbamoylase {Human (Homo sapiens) | 80.17 |
| >d3bzwa1 c.23.10.9 (A:38-285) Uncharacterized protein BT2961 {Bacteroides thetaiotaomicron [TaxId: 818]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Flavodoxin-like superfamily: SGNH hydrolase family: BT2961-like domain: Uncharacterized protein BT2961 species: Bacteroides thetaiotaomicron [TaxId: 818]
Probab=89.03 E-value=0.066 Score=42.06 Aligned_cols=15 Identities=40% Similarity=0.778 Sum_probs=13.2
Q ss_pred cCCcEEEEechhhHH
Q 021968 98 RGKRILFVGDSISLN 112 (304)
Q Consensus 98 rgkri~FVGDSl~Rn 112 (304)
.||||+|+|||++-.
T Consensus 7 ~~kkI~~~GDS~T~g 21 (248)
T d3bzwa1 7 QGKKVGYIGDSITDP 21 (248)
T ss_dssp TTCEEEEEESTTTCT
T ss_pred CCCEEEEEehHHccC
Confidence 699999999999853
|
| >d3dc7a1 c.23.10.9 (A:18-224) Uncharacterized protein Lp3323 {Lactobacillus plantarum [TaxId: 1590]} | Back information, alignment and structure |
|---|
| >d1pvva2 c.78.1.1 (A:151-313) Ornithine transcarbamoylase {Archaeon Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
| >d1otha2 c.78.1.1 (A:185-354) Ornithine transcarbamoylase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|