Citrus Sinensis ID: 021971


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300----
MLFVYGRILSQRLVNTVTSDKFLYQFVSSLIKYHMVICYFLYISGFVWFILTLKKKMYKYQFSQYAWTHMILIVVFAQSSFTVASIFEGIFWFLLPASLIVINDIAAYIFGFFFGRTPLIKLSPKKTWEGFIGASVATITSAFVLANIMGRFQWLTCPRKDLATGWLHCDPGPLFKPESFPLPGWLPWKEITILPVQWHALCLGLFASIIAPFGGFFASGFKRAFKIKDFGDSIPGHGGITDRMDCQMVMAVFAYIYHQSFIVPQSFRVEMILEQILTALTYEEQKALYMKLGEILQERLFGQS
cEEEcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccHHcccHHHHHHHHHHHHHHHHHccHHHHHHHHHccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHccHHHHHHHHHHHHHHHHHcccccc
cEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccEEEcccccHHHHHHHHHHHHHHHHHHHHHHHcccEEEccccccccccccccccccEEcccccccccccccEEEEcHHHHHHHHHHHHHHHHccccHHHHHHHHHHEEEccccccccccccccccccHHHHHHHHHHEHHHHHEccccccHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHcccc
MLFVYGRILSQRLVNTVTSDKFLYQFVSSLIKYHMVICYFLYISGFVWFILTLKKKMYKYQFSQYAWTHMILIVVFAQSSFTVASIFEGIFWFLLPASLIVINDIAAYIFGfffgrtpliklspkktwegFIGASVATITSAFVLANIMGRfqwltcprkdlatgwlhcdpgplfkpesfplpgwlpwkeitilPVQWHALCLGLFAsiiapfggffasgFKRAFKikdfgdsipghggitdrmDCQMVMAVFAYIYhqsfivpqSFRVEMILEQILTALTYEEQKALYMKLGEILQERLFGQS
mlfvygrilsqrlvntVTSDKFLYQFVSSLIKYHMVICYFLYISGFVWFILTLKKKMYKYQFSQYAWTHMILIVVFAQSSFTVASIFEGIFWFLLPASLIVINDIAAYIFGFFFGRTPLIKLSPKKTWEGFIGASVATITSAFVLANIMGRFQWLTCPRKDLATGWLHCDPGPLFKPESFPLPGWLPWKEITILPVQWHALCLGLFASIIAPFGGFFASGFKRAFKIKDFGDSIPGHGGITDRMDCQMVMAVFAYIYHQSFIVPQSFRVEMILEQILTALTYEEQKALYMKLGEILQERLFGQS
MLFVYGRILSQRLVNTVTSDKFLYQFVSSLIKYHMVICYFLYISGFVWFILTLKKKMYKYQFSQYAWTHMILIVVFAQSSFTVASIFEGIFWFLLPASLIVINDIAAYIFGFFFGRTPLIKLSPKKTWEGFIGASVATITSAFVLANIMGRFQWLTCPRKDLATGWLHCDPGPLFKPESFPLPGWLPWKEITILPVQWHALCLGLFASIIAPFGGFFASGFKRAFKIKDFGDSIPGHGGITDRMDCQMVMAVFAYIYHQSFIVPQSFRVEMILEQILTALTYEEQKALYMKLGEILQERLFGQS
*LFVYGRILSQRLVNTVTSDKFLYQFVSSLIKYHMVICYFLYISGFVWFILTLKKKMYKYQFSQYAWTHMILIVVFAQSSFTVASIFEGIFWFLLPASLIVINDIAAYIFGFFFGRTPLIKLSPKKTWEGFIGASVATITSAFVLANIMGRFQWLTCPRKDLATGWLHCDPGPLFKPESFPLPGWLPWKEITILPVQWHALCLGLFASIIAPFGGFFASGFKRAFKIKDFGDSIPGHGGITDRMDCQMVMAVFAYIYHQSFIVPQSFRVEMILEQILTALTYEEQKALYMKLGEILQERL****
MLFVYGRILSQRLVNTVTSDKFLYQFVSSLIKYHMVICYFLYISGFVWFILTLKKKMYKYQFSQYAWTHMILIVVFAQSSFTVASIFEGIFWFLLPASLIVINDIAAYIFGFFFGRTPLIKLSPKKTWEGFIGASVATITSAFVLANIMGRFQWLTCPRKDLATGWLHCDPGPLFKPESFPLPGWLPWKEITILPVQWHALCLGLFASIIAPFGGFFASGFKRAFKIKDFGDSIPGHGGITDRMDCQMVMAVFAYIYHQSFIVPQSFRVEMILEQILTALTYEEQKALYMKLGEIL********
MLFVYGRILSQRLVNTVTSDKFLYQFVSSLIKYHMVICYFLYISGFVWFILTLKKKMYKYQFSQYAWTHMILIVVFAQSSFTVASIFEGIFWFLLPASLIVINDIAAYIFGFFFGRTPLIKLSPKKTWEGFIGASVATITSAFVLANIMGRFQWLTCPRKDLATGWLHCDPGPLFKPESFPLPGWLPWKEITILPVQWHALCLGLFASIIAPFGGFFASGFKRAFKIKDFGDSIPGHGGITDRMDCQMVMAVFAYIYHQSFIVPQSFRVEMILEQILTALTYEEQKALYMKLGEILQERLFGQS
MLFVYGRILSQRLVNTVTSDKFLYQFVSSLIKYHMVICYFLYISGFVWFILTLKKKMYKYQFSQYAWTHMILIVVFAQSSFTVASIFEGIFWFLLPASLIVINDIAAYIFGFFFGRTPLIKLSPKKTWEGFIGASVATITSAFVLANIMGRFQWLTCPRKDLATGWLHCDPGPLFKPESFPLPGWLPWKEITILPVQWHALCLGLFASIIAPFGGFFASGFKRAFKIKDFGDSIPGHGGITDRMDCQMVMAVFAYIYHQSFIVPQSFRVEMILEQILTALTYEEQKALYMKLGEILQERL****
oooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
ooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
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MLFVYGRILSQRLVNTVTSDKFLYQFVSSLIKYHMVICYFLYISGFVWFILTLKKKMYKYQFSQYAWTHMILIVVFAQSSFTVASIFEGIFWFLLPASLIVINDIAAYIFGFFFGRTPLIKLSPKKTWEGFIGASVATITSAFVLANIMGRFQWLTCPRKDLATGWLHCDPGPLFKPESFPLPGWLPWKEITILPVQWHALCLGLFASIIAPFGGFFASGFKRAFKIKDFGDSIPGHGGITDRMDCQMVMAVFAYIYHQSFIVPQSFRVEMILEQILTALTYEEQKALYMKLGEILQERLFGQS
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query304 2.2.26 [Sep-21-2011]
O04928421 Phosphatidate cytidylyltr no no 0.986 0.712 0.828 1e-148
O04940424 Phosphatidate cytidylyltr N/A no 1.0 0.716 0.827 1e-145
Q92903461 Phosphatidate cytidylyltr yes no 0.953 0.629 0.457 2e-71
P98191461 Phosphatidate cytidylyltr yes no 0.953 0.629 0.457 3e-71
O35052461 Phosphatidate cytidylyltr yes no 0.953 0.629 0.457 3e-71
Q9P381439 Putative phosphatidate cy yes no 0.901 0.624 0.454 1e-68
Q99L43444 Phosphatidate cytidylyltr no no 0.953 0.653 0.437 3e-68
A0JNC1445 Phosphatidate cytidylyltr no no 0.953 0.651 0.437 5e-68
O95674445 Phosphatidate cytidylyltr no no 0.953 0.651 0.437 2e-67
Q91XU8443 Phosphatidate cytidylyltr no no 0.950 0.652 0.437 2e-66
>sp|O04928|CDS1_ARATH Phosphatidate cytidylyltransferase OS=Arabidopsis thaliana GN=CDS1 PE=2 SV=1 Back     alignment and function desciption
 Score =  523 bits (1346), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 252/304 (82%), Positives = 275/304 (90%), Gaps = 4/304 (1%)

Query: 1   MLFVYGRILSQRLVNTVTSDKFLYQFVSSLIKYHMVICYFLYISGFVWFILTLKKKMYKY 60
           MLFVYGRILSQRL NT+T+D+F Y+ VS LIKYHM ICY LYI GF+WFILTLKKKMYKY
Sbjct: 117 MLFVYGRILSQRLANTMTADQFFYRLVSGLIKYHMAICYLLYIIGFMWFILTLKKKMYKY 176

Query: 61  QFSQYAWTHMILIVVFAQSSFTVASIFEGIFWFLLPASLIVINDIAAYIFGFFFGRTPLI 120
           QF QYAWTHMILIVVF QSSFTVA+IFEGIFWFLLPASLI+INDI AYIFGFFFGRTPLI
Sbjct: 177 QFGQYAWTHMILIVVFTQSSFTVANIFEGIFWFLLPASLIIINDIFAYIFGFFFGRTPLI 236

Query: 121 KLSPKKTWEGFIGASVATITSAFVLANIMGRFQWLTCPRKDLATGWLHCDPGPLFKPESF 180
           KLSPKKTWEGFIGASV TI SAFVLANI+GRF WLTCPR+DL+TGWL CD  PLFKPE F
Sbjct: 237 KLSPKKTWEGFIGASVTTIISAFVLANILGRFPWLTCPRQDLSTGWLQCDADPLFKPEPF 296

Query: 181 PLPGWL----PWKEITILPVQWHALCLGLFASIIAPFGGFFASGFKRAFKIKDFGDSIPG 236
            LP W+    PWKE+TILPVQWHALCLGLFASIIAPFGGFFASGFKRAFKIKDFGDSIPG
Sbjct: 297 ALPAWIPEWFPWKEMTILPVQWHALCLGLFASIIAPFGGFFASGFKRAFKIKDFGDSIPG 356

Query: 237 HGGITDRMDCQMVMAVFAYIYHQSFIVPQSFRVEMILEQILTALTYEEQKALYMKLGEIL 296
           HGGITDRMDCQMVMAVFAYIY QSFIV QS  V+ IL+QILT LT+EEQ+AL++KLG++L
Sbjct: 357 HGGITDRMDCQMVMAVFAYIYLQSFIVSQSVSVDKILDQILTNLTFEEQQALFVKLGQML 416

Query: 297 QERL 300
           +++L
Sbjct: 417 KDKL 420




May be involved in the synthesis of minor phospholipids and in modulation of IP3-mediated signal transduction.
Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 7EC: .EC: 7EC: .EC: 4EC: 1
>sp|O04940|CDS1_SOLTU Phosphatidate cytidylyltransferase OS=Solanum tuberosum GN=CDS1 PE=2 SV=1 Back     alignment and function description
>sp|Q92903|CDS1_HUMAN Phosphatidate cytidylyltransferase 1 OS=Homo sapiens GN=CDS1 PE=2 SV=2 Back     alignment and function description
>sp|P98191|CDS1_MOUSE Phosphatidate cytidylyltransferase 1 OS=Mus musculus GN=Cds1 PE=2 SV=2 Back     alignment and function description
>sp|O35052|CDS1_RAT Phosphatidate cytidylyltransferase 1 OS=Rattus norvegicus GN=Cds1 PE=1 SV=2 Back     alignment and function description
>sp|Q9P381|CDSH_SCHPO Putative phosphatidate cytidylyltransferase OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC13A2.03 PE=1 SV=1 Back     alignment and function description
>sp|Q99L43|CDS2_MOUSE Phosphatidate cytidylyltransferase 2 OS=Mus musculus GN=Cds2 PE=1 SV=1 Back     alignment and function description
>sp|A0JNC1|CDS2_BOVIN Phosphatidate cytidylyltransferase 2 OS=Bos taurus GN=CDS2 PE=1 SV=1 Back     alignment and function description
>sp|O95674|CDS2_HUMAN Phosphatidate cytidylyltransferase 2 OS=Homo sapiens GN=CDS2 PE=1 SV=1 Back     alignment and function description
>sp|Q91XU8|CDS2_RAT Phosphatidate cytidylyltransferase 2 OS=Rattus norvegicus GN=Cds2 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query304
356576511 424 PREDICTED: phosphatidate cytidylyltransf 1.0 0.716 0.853 1e-153
255554719 423 phosphatidate cytidylyltransferase, puta 1.0 0.718 0.860 1e-153
449434016 422 PREDICTED: phosphatidate cytidylyltransf 0.993 0.715 0.849 1e-151
356535384 424 PREDICTED: phosphatidate cytidylyltransf 0.980 0.702 0.864 1e-151
357447853 426 Phosphatidate cytidylyltransferase [Medi 0.980 0.699 0.857 1e-151
297799782 423 hypothetical protein ARALYDRAFT_492631 [ 0.996 0.716 0.843 1e-151
79325225 447 cytidinediphosphate diacylglycerol synth 0.996 0.677 0.837 1e-149
15235611 423 cytidinediphosphate diacylglycerol synth 0.996 0.716 0.837 1e-149
42572989365 cytidinediphosphate diacylglycerol synth 0.996 0.830 0.837 1e-149
224118188 422 predicted protein [Populus trichocarpa] 0.983 0.708 0.841 1e-148
>gi|356576511|ref|XP_003556374.1| PREDICTED: phosphatidate cytidylyltransferase-like [Glycine max] Back     alignment and taxonomy information
 Score =  547 bits (1409), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 263/308 (85%), Positives = 285/308 (92%), Gaps = 4/308 (1%)

Query: 1   MLFVYGRILSQRLVNTVTSDKFLYQFVSSLIKYHMVICYFLYISGFVWFILTLKKKMYKY 60
           MLFVYGRILSQRLVNTVTSD  LY+ VS+LIKYHMVICY LYI+GF+WFILTLKKKMYKY
Sbjct: 117 MLFVYGRILSQRLVNTVTSDMVLYRLVSNLIKYHMVICYSLYIAGFMWFILTLKKKMYKY 176

Query: 61  QFSQYAWTHMILIVVFAQSSFTVASIFEGIFWFLLPASLIVINDIAAYIFGFFFGRTPLI 120
           QF QYAWTHMILIVVF QSSFTVASIFEGIFWFLLPA+LIVINDIAAYIFGFFFGRTPLI
Sbjct: 177 QFGQYAWTHMILIVVFGQSSFTVASIFEGIFWFLLPATLIVINDIAAYIFGFFFGRTPLI 236

Query: 121 KLSPKKTWEGFIGASVATITSAFVLANIMGRFQWLTCPRKDLATGWLHCDPGPLFKPESF 180
           KLSPKKTWEGFIGASV TI SAF+LANIMGR QWLTCPRKDL+TGWLHCDPGPLFKPES+
Sbjct: 237 KLSPKKTWEGFIGASVTTIISAFMLANIMGRSQWLTCPRKDLSTGWLHCDPGPLFKPESY 296

Query: 181 PLPGWLP----WKEITILPVQWHALCLGLFASIIAPFGGFFASGFKRAFKIKDFGDSIPG 236
           PL GW+     WKEI+ILP+QWH+LCLGLFASIIAPFGGFFASGFKRAFKIKDFGDSIPG
Sbjct: 297 PLQGWISHWFAWKEISILPIQWHSLCLGLFASIIAPFGGFFASGFKRAFKIKDFGDSIPG 356

Query: 237 HGGITDRMDCQMVMAVFAYIYHQSFIVPQSFRVEMILEQILTALTYEEQKALYMKLGEIL 296
           HGGITDRMDCQMVMAVFAYIYHQSF+VPQ+  VEMIL+QIL  LT++EQ+ALY +LGEIL
Sbjct: 357 HGGITDRMDCQMVMAVFAYIYHQSFVVPQTLSVEMILDQILINLTFDEQEALYWRLGEIL 416

Query: 297 QERLFGQS 304
           Q+ +  +S
Sbjct: 417 QQGITRKS 424




Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255554719|ref|XP_002518397.1| phosphatidate cytidylyltransferase, putative [Ricinus communis] gi|223542242|gb|EEF43784.1| phosphatidate cytidylyltransferase, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|449434016|ref|XP_004134792.1| PREDICTED: phosphatidate cytidylyltransferase-like [Cucumis sativus] gi|449516305|ref|XP_004165187.1| PREDICTED: phosphatidate cytidylyltransferase-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|356535384|ref|XP_003536226.1| PREDICTED: phosphatidate cytidylyltransferase-like [Glycine max] Back     alignment and taxonomy information
>gi|357447853|ref|XP_003594202.1| Phosphatidate cytidylyltransferase [Medicago truncatula] gi|87241162|gb|ABD33020.1| Phosphatidate cytidylyltransferase [Medicago truncatula] gi|355483250|gb|AES64453.1| Phosphatidate cytidylyltransferase [Medicago truncatula] Back     alignment and taxonomy information
>gi|297799782|ref|XP_002867775.1| hypothetical protein ARALYDRAFT_492631 [Arabidopsis lyrata subsp. lyrata] gi|297313611|gb|EFH44034.1| hypothetical protein ARALYDRAFT_492631 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|79325225|ref|NP_001031697.1| cytidinediphosphate diacylglycerol synthase 2 [Arabidopsis thaliana] gi|332659197|gb|AEE84597.1| cytidinediphosphate diacylglycerol synthase 2 [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|15235611|ref|NP_193965.1| cytidinediphosphate diacylglycerol synthase 2 [Arabidopsis thaliana] gi|4455156|emb|CAA16784.1| CDP-diacylglycerol synthetase-like protein [Arabidopsis thaliana] gi|7269080|emb|CAB79189.1| CDP-diacylglycerol synthetase-like protein [Arabidopsis thaliana] gi|17644177|gb|AAL38786.1| putative CDP-diacylglycerol synthetase [Arabidopsis thaliana] gi|20259077|gb|AAM14254.1| putative CDP-diacylglycerol synthetase [Arabidopsis thaliana] gi|21536804|gb|AAM61136.1| CDP-diacylglycerol synthetase-like protein [Arabidopsis thaliana] gi|332659195|gb|AEE84595.1| cytidinediphosphate diacylglycerol synthase 2 [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|42572989|ref|NP_974591.1| cytidinediphosphate diacylglycerol synthase 2 [Arabidopsis thaliana] gi|332659196|gb|AEE84596.1| cytidinediphosphate diacylglycerol synthase 2 [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|224118188|ref|XP_002331579.1| predicted protein [Populus trichocarpa] gi|222873803|gb|EEF10934.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query304
TAIR|locus:2132026447 CDS2 "cytidinediphosphate diac 0.993 0.675 0.839 8.9e-141
TAIR|locus:2027144421 CDS1 "CDP-diacylglycerol synth 0.986 0.712 0.828 4e-138
TAIR|locus:2116272471 AT4G26770 [Arabidopsis thalian 0.996 0.643 0.781 1.2e-134
ASPGD|ASPL0000030062450 AN5166 [Emericella nidulans (t 0.957 0.646 0.471 4.1e-72
UNIPROTKB|F6Z956467 CDS1 "Phosphatidate cytidylylt 0.953 0.620 0.460 2.9e-71
ZFIN|ZDB-GENE-070705-78431 si:ch211-168m18.1 "si:ch211-16 0.953 0.672 0.463 1.3e-70
UNIPROTKB|G1LAF9459 CDS1 "Phosphatidate cytidylylt 0.953 0.631 0.463 1.6e-70
UNIPROTKB|G3MZU2461 LOC100336936 "Phosphatidate cy 0.953 0.629 0.463 2.1e-70
UNIPROTKB|F6SYW0461 CDS1 "Phosphatidate cytidylylt 0.953 0.629 0.460 2.1e-70
UNIPROTKB|Q5R9Z3461 DKFZp459A2126 "Putative unchar 0.953 0.629 0.457 2.6e-70
TAIR|locus:2132026 CDS2 "cytidinediphosphate diacylglycerol synthase 2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1377 (489.8 bits), Expect = 8.9e-141, P = 8.9e-141
 Identities = 257/306 (83%), Positives = 280/306 (91%)

Query:     1 MLFVYGRILSQRLVNTVTSDKFLYQFVSSLIKYHMVICYFLYISGFVWFILTLKKKMYKY 60
             MLFVYGRILSQRLVNTVT DK LY+ V+SLIKYHM ICY LYISGFVWFILTLKKKMYKY
Sbjct:   141 MLFVYGRILSQRLVNTVTPDKVLYRLVTSLIKYHMAICYSLYISGFVWFILTLKKKMYKY 200

Query:    61 QFSQYAWTHMILIVVFAQSSFTVASIFEGIFWFLLPASLIVINDIAAYIFGFFFGRTPLI 120
             QFSQYAWTHMILIVVF QSSFTVA+IFEGIFWFLLPASLIVINDI AYI GFFFGRTPLI
Sbjct:   201 QFSQYAWTHMILIVVFTQSSFTVANIFEGIFWFLLPASLIVINDIFAYICGFFFGRTPLI 260

Query:   121 KLSPKKTWEGFIGASVATITSAFVLANIMGRFQWLTCPRKDLATGWLHCDPGPLFKPESF 180
             KLSPKKTWEGFIGAS+ T+ SAF+LANIMGRF WLTCPR+DL+TGWL CDPGPLFK E+ 
Sbjct:   261 KLSPKKTWEGFIGASITTVISAFLLANIMGRFLWLTCPREDLSTGWLLCDPGPLFKQETH 320

Query:   181 PLPGW----LPWKEITILPVQWHALCLGLFASIIAPFGGFFASGFKRAFKIKDFGDSIPG 236
              LPGW    LPWKEI+ILPVQWHALCLGLFASIIAPFGGFFASGFKRAFKIKDFGDSIPG
Sbjct:   321 ALPGWISDWLPWKEISILPVQWHALCLGLFASIIAPFGGFFASGFKRAFKIKDFGDSIPG 380

Query:   237 HGGITDRMDCQMVMAVFAYIYHQSFIVPQSFRVEMILEQILTALTYEEQKALYMKLGEIL 296
             HGGITDRMDCQMVMAVFAYIYHQSF+VP+   V+ +L+QI+T+LT EEQ+AL +KLG++L
Sbjct:   381 HGGITDRMDCQMVMAVFAYIYHQSFVVPEVLSVDKLLDQIITSLTLEEQQALLVKLGQML 440

Query:   297 QERLFG 302
             QE++ G
Sbjct:   441 QEKVIG 446




GO:0004605 "phosphatidate cytidylyltransferase activity" evidence=IEA;ISS;IMP
GO:0016020 "membrane" evidence=IEA
GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA
GO:0019408 "dolichol biosynthetic process" evidence=RCA
GO:0005783 "endoplasmic reticulum" evidence=IDA
TAIR|locus:2027144 CDS1 "CDP-diacylglycerol synthase 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2116272 AT4G26770 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
ASPGD|ASPL0000030062 AN5166 [Emericella nidulans (taxid:162425)] Back     alignment and assigned GO terms
UNIPROTKB|F6Z956 CDS1 "Phosphatidate cytidylyltransferase" [Monodelphis domestica (taxid:13616)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-070705-78 si:ch211-168m18.1 "si:ch211-168m18.1" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
UNIPROTKB|G1LAF9 CDS1 "Phosphatidate cytidylyltransferase" [Ailuropoda melanoleuca (taxid:9646)] Back     alignment and assigned GO terms
UNIPROTKB|G3MZU2 LOC100336936 "Phosphatidate cytidylyltransferase" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|F6SYW0 CDS1 "Phosphatidate cytidylyltransferase" [Equus caballus (taxid:9796)] Back     alignment and assigned GO terms
UNIPROTKB|Q5R9Z3 DKFZp459A2126 "Putative uncharacterized protein DKFZp459A2126" [Pongo abelii (taxid:9601)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
O04940CDS1_SOLTU2, ., 7, ., 7, ., 4, 10.82791.00.7169N/Ano

EC Number Prediction by Ezypred Server ?

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
4th Layer2.7.7.410.991
3rd Layer2.7.70.976

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Fail to connect to STRING server


Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query304
PLN02594342 PLN02594, PLN02594, phosphatidate cytidylyltransfe 0.0
pfam01148259 pfam01148, CTP_transf_1, Cytidylyltransferase fami 6e-42
COG0575265 COG0575, CdsA, CDP-diglyceride synthetase [Lipid m 1e-26
COG4589303 COG4589, COG4589, Predicted CDP-diglyceride synthe 1e-12
PLN02953403 PLN02953, PLN02953, phosphatidate cytidylyltransfe 5e-12
PRK11624285 PRK11624, cdsA, CDP-diglyceride synthase; Provisio 1e-10
>gnl|CDD|215322 PLN02594, PLN02594, phosphatidate cytidylyltransferase Back     alignment and domain information
 Score =  562 bits (1451), Expect = 0.0
 Identities = 257/308 (83%), Positives = 276/308 (89%), Gaps = 4/308 (1%)

Query: 1   MLFVYGRILSQRLVNTVTSDKFLYQFVSSLIKYHMVICYFLYISGFVWFILTLKKKMYKY 60
           M FVYGR L Q+LVNTVTSDKFLY+ VS LIKYHM ICY LYI+GFVWFILTLKK MYKY
Sbjct: 35  MFFVYGRFLKQQLVNTVTSDKFLYRLVSGLIKYHMAICYSLYIAGFVWFILTLKKGMYKY 94

Query: 61  QFSQYAWTHMILIVVFAQSSFTVASIFEGIFWFLLPASLIVINDIAAYIFGFFFGRTPLI 120
           QF QYAWTHMILIVVF QSSFTVA+IFEGIFWFLLPASLIVINDIAAY+FGFFFGRTPLI
Sbjct: 95  QFGQYAWTHMILIVVFTQSSFTVANIFEGIFWFLLPASLIVINDIAAYLFGFFFGRTPLI 154

Query: 121 KLSPKKTWEGFIGASVATITSAFVLANIMGRFQWLTCPRKDLATGWLHCDPGPLFKPESF 180
           KLSPKKTWEGFIGASV T+ SAF LANIMG+FQWLTCPRKDL+TGWL CDP PLFKPE++
Sbjct: 155 KLSPKKTWEGFIGASVTTLISAFYLANIMGKFQWLTCPRKDLSTGWLECDPDPLFKPETY 214

Query: 181 PLPGW----LPWKEITILPVQWHALCLGLFASIIAPFGGFFASGFKRAFKIKDFGDSIPG 236
           PLPGW     PWKE+++LPVQWHAL LGLFASIIAPFGGFFASGFKRAFKIKDFGDSIPG
Sbjct: 215 PLPGWIPRWFPWKEVSVLPVQWHALSLGLFASIIAPFGGFFASGFKRAFKIKDFGDSIPG 274

Query: 237 HGGITDRMDCQMVMAVFAYIYHQSFIVPQSFRVEMILEQILTALTYEEQKALYMKLGEIL 296
           HGGITDRMDCQMVMAVFAYIY+QSFIVPQS  V  +L+QILT LT EEQK LY+KLG++L
Sbjct: 275 HGGITDRMDCQMVMAVFAYIYYQSFIVPQSVSVGKLLDQILTLLTDEEQKELYVKLGQML 334

Query: 297 QERLFGQS 304
           QER  G  
Sbjct: 335 QERGLGLG 342


Length = 342

>gnl|CDD|216329 pfam01148, CTP_transf_1, Cytidylyltransferase family Back     alignment and domain information
>gnl|CDD|223648 COG0575, CdsA, CDP-diglyceride synthetase [Lipid metabolism] Back     alignment and domain information
>gnl|CDD|226955 COG4589, COG4589, Predicted CDP-diglyceride synthetase/phosphatidate cytidylyltransferase [General function prediction only] Back     alignment and domain information
>gnl|CDD|178539 PLN02953, PLN02953, phosphatidate cytidylyltransferase Back     alignment and domain information
>gnl|CDD|183240 PRK11624, cdsA, CDP-diglyceride synthase; Provisional Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 304
PLN02594342 phosphatidate cytidylyltransferase 100.0
KOG1440432 consensus CDP-diacylglycerol synthase [Lipid trans 100.0
PRK11624285 cdsA CDP-diglyceride synthase; Provisional 100.0
PLN02953403 phosphatidate cytidylyltransferase 100.0
COG0575265 CdsA CDP-diglyceride synthetase [Lipid metabolism] 100.0
PF01148259 CTP_transf_1: Cytidylyltransferase family; InterPr 100.0
COG4589303 Predicted CDP-diglyceride synthetase/phosphatidate 100.0
PRK04032159 hypothetical protein; Provisional 99.94
PF01864175 DUF46: Putative integral membrane protein DUF46; I 99.67
KOG4453269 consensus Predicted ER membrane protein [Function 97.58
COG0170216 SEC59 Dolichol kinase [Lipid metabolism] 97.17
KOG2468510 consensus Dolichol kinase [Lipid transport and met 94.24
>PLN02594 phosphatidate cytidylyltransferase Back     alignment and domain information
Probab=100.00  E-value=4.6e-88  Score=644.95  Aligned_cols=304  Identities=85%  Similarity=1.449  Sum_probs=291.3

Q ss_pred             CeeeehHHHHHHHHHhhcchhhHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHHHHH
Q 021971            1 MLFVYGRILSQRLVNTVTSDKFLYQFVSSLIKYHMVICYFLYISGFVWFILTLKKKMYKYQFSQYAWTHMILIVVFAQSS   80 (304)
Q Consensus         1 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~ly~~~~v~fvlsL~k~~~~~~~~~~~~t~~~ll~v~~~~~   80 (304)
                      +||+|||++.+++.+.+.+++.+..++.++++||+++||++|++|+++||++|+|+++++|+.+++||++++++++.+++
T Consensus        35 ~~~~yg~~~~~~~~~~~~~~~~l~~~~~~~~~~h~~isf~ly~~gfv~FvlsL~k~~~k~qf~~~a~t~~~llyV~~~~~  114 (342)
T PLN02594         35 MFFVYGRFLKQQLVNTVTSDKFLYRLVSGLIKYHMAICYSLYIAGFVWFILTLKKGMYKYQFGQYAWTHMILIVVFTQSS  114 (342)
T ss_pred             HHHHhhHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccHHHHHHHHHHHHHHHHHHH
Confidence            48899999999999999999998888889999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHhhhhhhHHHHHHHHHHHhhchhHhhhhcccCCccccccCCCCCchHHHHHHHHHHHHHHHHHHHhhhccccccCCC
Q 021971           81 FTVASIFEGIFWFLLPASLIVINDIAAYIFGFFFGRTPLIKLSPKKTWEGFIGASVATITSAFVLANIMGRFQWLTCPRK  160 (304)
Q Consensus        81 ~~i~~~~~G~~w~il~~~~v~~nD~~AY~~G~~fGk~kL~~iSP~KTwEG~iGG~i~t~i~~~~~~~~~~~~~~~~cp~~  160 (304)
                      +.+.|+++|..|+++|+.+||+||++||++||.||||||+++||||||||++||+++|++++.+++.++++++|++||.+
T Consensus       115 ~ii~ni~~G~~w~~l~~~lV~~nDi~AY~~G~~fGk~kL~~iSPkKTwEGfiGg~i~T~i~~~~~~~~~~~~~~~~cp~~  194 (342)
T PLN02594        115 FTVANIFEGIFWFLLPASLIVINDIAAYLFGFFFGRTPLIKLSPKKTWEGFIGASVTTLISAFYLANIMGKFQWLTCPRK  194 (342)
T ss_pred             HHHHHccccHHHHHHHHHHHHHHhHHHHHHHHHhcCCCCCccCCCCchhhhHHHHHHHHHHHHHHHHHhcccccccCCcc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCccccCCCCCCCCCcCCCCCCC----CccccccchhHHHHHHHHHHHHHhhhhhhHHHHHhhhcCCCCCCCCCCCC
Q 021971          161 DLATGWLHCDPGPLFKPESFPLPGWL----PWKEITILPVQWHALCLGLFASIIAPFGGFFASGFKRAFKIKDFGDSIPG  236 (304)
Q Consensus       161 ~~~~~~~~c~~~~~f~~~~~~~~~~~----~~~~~~~~~~~~~~l~l~~~~sl~a~~GDl~~S~iKR~~gIKD~G~~iPG  236 (304)
                      +++.++++||||++|++++|.+|.|.    ++.++++.|.++|++++|+++|++||+||++||++||++||||||+++||
T Consensus       195 ~~~~~~~~C~p~~~f~~~~~~~p~~~~~~~~~~~i~~~~~~~h~l~l~l~aSl~a~fGdlfaS~~KR~~~IKDfG~~IPG  274 (342)
T PLN02594        195 DLSTGWLECDPDPLFKPETYPLPGWIPRWFPWKEVSVLPVQWHALSLGLFASIIAPFGGFFASGFKRAFKIKDFGDSIPG  274 (342)
T ss_pred             ccccCcccCCCccccccccccCCccccccccccccccchHHHHHHHHHHHHHHHHHhhhHHHHHHHHccCCCcccCccCC
Confidence            99988999999999999999999652    33456677889999999999999999999999999999999999999999


Q ss_pred             CcchhhhhhhhhHHHHHHHHHHHHhccCCCCCHHHHHHHHHhcCCHHHHHHHHHHHHHHHhhcccCCC
Q 021971          237 HGGITDRMDCQMVMAVFAYIYHQSFIVPQSFRVEMILEQILTALTYEEQKALYMKLGEILQERLFGQS  304 (304)
Q Consensus       237 HGGilDR~Dsll~~~~f~y~y~~~fi~~~~~~~~~~~~~~~~~l~~~~~~~l~~~l~~~~~~~~~~~~  304 (304)
                      |||++||+||+++|+|++|+|+++||+.+++|++++++++.++|++|||++|++.|+++|+++|++.+
T Consensus       275 HGGilDRfDs~l~~~~f~y~y~~~fi~~~~~~~~~il~~i~~~l~~~~q~~l~~~l~~~l~~~g~~~~  342 (342)
T PLN02594        275 HGGITDRMDCQMVMAVFAYIYYQSFIVPQSVSVGKLLDQILTLLTDEEQKELYVKLGQMLQERGLGLG  342 (342)
T ss_pred             CccccccccHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCCCC
Confidence            99999999999999999999999999999999999999998889999999999999999999998764



>KOG1440 consensus CDP-diacylglycerol synthase [Lipid transport and metabolism] Back     alignment and domain information
>PRK11624 cdsA CDP-diglyceride synthase; Provisional Back     alignment and domain information
>PLN02953 phosphatidate cytidylyltransferase Back     alignment and domain information
>COG0575 CdsA CDP-diglyceride synthetase [Lipid metabolism] Back     alignment and domain information
>PF01148 CTP_transf_1: Cytidylyltransferase family; InterPro: IPR000374 Phosphatidate cytidylyltransferase (2 Back     alignment and domain information
>COG4589 Predicted CDP-diglyceride synthetase/phosphatidate cytidylyltransferase [General function prediction only] Back     alignment and domain information
>PRK04032 hypothetical protein; Provisional Back     alignment and domain information
>PF01864 DUF46: Putative integral membrane protein DUF46; InterPro: IPR002726 This archaebacterial protein has no known function Back     alignment and domain information
>KOG4453 consensus Predicted ER membrane protein [Function unknown] Back     alignment and domain information
>COG0170 SEC59 Dolichol kinase [Lipid metabolism] Back     alignment and domain information
>KOG2468 consensus Dolichol kinase [Lipid transport and metabolism] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query304
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 6e-05
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
 Score = 43.7 bits (102), Expect = 6e-05
 Identities = 55/375 (14%), Positives = 95/375 (25%), Gaps = 138/375 (36%)

Query: 1   MLFVYGRILSQRLVNTVTSDKFLYQFVSSLIKYHMV---ICYFLYIS------------- 44
            L      + Q+ V  V      Y+F+ S IK       +   +YI              
Sbjct: 70  TLLSKQEEMVQKFVEEVLRIN--YKFLMSPIKTEQRQPSMMTRMYIEQRDRLYNDNQVFA 127

Query: 45  -GFVW---FILTLKKKMYKYQFSQYAWTH-M------ILIVVFAQSSFTVASIFEGIFWF 93
              V      L L++ + + + ++      +       + +    S      +   IFW 
Sbjct: 128 KYNVSRLQPYLKLRQALLELRPAKNVLIDGVLGSGKTWVALDVCLSYKVQCKMDFKIFWL 187

Query: 94  LL-----PASLI--------------------------VINDIAAYIFGFFFGR---TPL 119
            L     P +++                           I+ I A +      +     L
Sbjct: 188 NLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCL 247

Query: 120 IKL---SPKKTWEGF-IG---------ASVATITSAFVLANI-MGRFQW-LTCPR-KDLA 163
           + L      K W  F +            V    SA    +I +      LT    K L 
Sbjct: 248 LVLLNVQNAKAWNAFNLSCKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLL 307

Query: 164 TGWLHCDPGPLFKPESFPLPGWLPWKEITILPVQWHALCLGLFASIIAPFGGFFASGFKR 223
             +L C P  L            P + +T  P       L + A                
Sbjct: 308 LKYLDCRPQDL------------PREVLTTNP-----RRLSIIAE--------------- 335

Query: 224 AFKIKDFGDSIPGHGGITDRMDCQMVMAVFAYIYHQSFIVPQSFRVEMILEQILTALTYE 283
              I+D               D            H         ++  I+E  L  L   
Sbjct: 336 --SIRDG----------LATWD---------NWKH-----VNCDKLTTIIESSLNVLEPA 369

Query: 284 EQKALYMKLGEILQE 298
           E + ++ +L  +   
Sbjct: 370 EYRKMFDRLS-VFPP 383


Structure Templates Detected by HHsearch ?

No hit with probability above 80.00


Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

No hit with probability above 80.00