Citrus Sinensis ID: 021989
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 304 | 2.2.26 [Sep-21-2011] | |||||||
| Q9FV52 | 369 | Methionine aminopeptidase | yes | no | 0.907 | 0.747 | 0.762 | 1e-121 | |
| Q9FV51 | 344 | Methionine aminopeptidase | no | no | 0.766 | 0.677 | 0.743 | 3e-99 | |
| Q9FV50 | 350 | Methionine aminopeptidase | no | no | 0.802 | 0.697 | 0.619 | 1e-83 | |
| Q54VU7 | 404 | Methionine aminopeptidase | yes | no | 0.759 | 0.571 | 0.517 | 7e-64 | |
| Q6UB28 | 335 | Methionine aminopeptidase | yes | no | 0.690 | 0.626 | 0.557 | 7e-63 | |
| Q9CPW9 | 335 | Methionine aminopeptidase | yes | no | 0.690 | 0.626 | 0.557 | 5e-62 | |
| Q4VBS4 | 338 | Methionine aminopeptidase | yes | no | 0.799 | 0.718 | 0.478 | 5e-60 | |
| Q9SLN5 | 398 | Methionine aminopeptidase | no | no | 0.717 | 0.547 | 0.480 | 7e-56 | |
| P53582 | 386 | Methionine aminopeptidase | no | no | 0.726 | 0.572 | 0.472 | 5e-54 | |
| Q5RBF3 | 386 | Methionine aminopeptidase | no | no | 0.726 | 0.572 | 0.472 | 8e-54 |
| >sp|Q9FV52|AMP1B_ARATH Methionine aminopeptidase 1B, chloroplastic OS=Arabidopsis thaliana GN=MAP1B PE=2 SV=2 | Back alignment and function desciption |
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Score = 434 bits (1117), Expect = e-121, Method: Compositional matrix adjust.
Identities = 212/278 (76%), Positives = 236/278 (84%), Gaps = 2/278 (0%)
Query: 29 SALFTGAPLSLSPSSTG--RQARCPNKLVVHAKRISGLEEAMRIRRERELQTTTKFRKRP 86
S F GAP++ S S + + P + V AK++SGLEEA+RIR+ REL+T +K R+ P
Sbjct: 30 SRCFLGAPVTSSSLSLSGKKNSYSPRQFHVSAKKVSGLEEAIRIRKMRELETKSKVRRNP 89
Query: 87 PLRRGRVSPRLPVPDHIPKPPYVSSTSLPDLSPEYQIHDSESIAKMRAACELAARVLDAA 146
PLRRGRVSPRL VPDHIP+PPYV S LPD+S E+QI E IAKMRAACELAARVL+ A
Sbjct: 90 PLRRGRVSPRLLVPDHIPRPPYVESGVLPDISSEFQIPGPEGIAKMRAACELAARVLNYA 149
Query: 147 GKLVRPSVTTNEIDKAVHQMIIEAGAYPSPLGYGGFPKSVCTSVNECMCHGIPDSRQLQD 206
G LV+PSVTTNEIDKAVH MIIEAGAYPSPLGYGGFPKSVCTSVNECMCHGIPDSRQLQ
Sbjct: 150 GTLVKPSVTTNEIDKAVHDMIIEAGAYPSPLGYGGFPKSVCTSVNECMCHGIPDSRQLQS 209
Query: 207 GDIINIDVTVYLNGYHGDTSKTFLCGNVSDGLKRLVKVTEECLEKGIAVCKDGASFKKIG 266
GDIINIDVTVYL+GYHGDTS+TF CG V +G KRLVKVTEECLE+GIAVCKDGASFKKIG
Sbjct: 210 GDIINIDVTVYLDGYHGDTSRTFFCGEVDEGFKRLVKVTEECLERGIAVCKDGASFKKIG 269
Query: 267 KRISEHAEKYGFGVVERFVGHGVGKVFHSEPIIYHNRK 304
KRISEHAEK+G+ VVERFVGHGVG VFHSEP+IYH R
Sbjct: 270 KRISEHAEKFGYNVVERFVGHGVGPVFHSEPLIYHYRN 307
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Removes the N-terminal methionine from nascent proteins. Arabidopsis thaliana (taxid: 3702) EC: 3EC: .EC: 4EC: .EC: 1EC: 1EC: .EC: 1EC: 8 |
| >sp|Q9FV51|AMP1C_ARATH Methionine aminopeptidase 1C, chloroplastic/mitochondrial OS=Arabidopsis thaliana GN=MAP1C PE=2 SV=2 | Back alignment and function description |
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| >sp|Q9FV50|AMP1D_ARATH Methionine aminopeptidase 1D, chloroplastic/mitochondrial OS=Arabidopsis thaliana GN=MAP1D PE=2 SV=1 | Back alignment and function description |
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| >sp|Q54VU7|AMP1D_DICDI Methionine aminopeptidase 1D, mitochondrial OS=Dictyostelium discoideum GN=metap1d PE=3 SV=1 | Back alignment and function description |
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| >sp|Q6UB28|AMP1D_HUMAN Methionine aminopeptidase 1D, mitochondrial OS=Homo sapiens GN=METAP1D PE=1 SV=1 | Back alignment and function description |
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| >sp|Q9CPW9|AMP1D_MOUSE Methionine aminopeptidase 1D, mitochondrial OS=Mus musculus GN=Metap1d PE=2 SV=1 | Back alignment and function description |
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| >sp|Q4VBS4|AMP1D_DANRE Methionine aminopeptidase 1D, mitochondrial OS=Danio rerio GN=metap1d PE=2 SV=1 | Back alignment and function description |
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| >sp|Q9SLN5|AMP1A_ARATH Methionine aminopeptidase 1A OS=Arabidopsis thaliana GN=MAP1A PE=2 SV=1 | Back alignment and function description |
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| >sp|P53582|AMPM1_HUMAN Methionine aminopeptidase 1 OS=Homo sapiens GN=METAP1 PE=1 SV=2 | Back alignment and function description |
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| >sp|Q5RBF3|AMPM1_PONAB Methionine aminopeptidase 1 OS=Pongo abelii GN=METAP1 PE=2 SV=1 | Back alignment and function description |
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Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 304 | ||||||
| 118488012 | 342 | unknown [Populus trichocarpa] | 0.901 | 0.801 | 0.843 | 1e-133 | |
| 255566855 | 365 | methionine aminopeptidase, putative [Ric | 0.901 | 0.750 | 0.830 | 1e-132 | |
| 356495984 | 366 | PREDICTED: methionine aminopeptidase 1B, | 0.973 | 0.808 | 0.743 | 1e-128 | |
| 449498639 | 369 | PREDICTED: methionine aminopeptidase 1B, | 0.898 | 0.739 | 0.802 | 1e-127 | |
| 449458896 | 369 | PREDICTED: methionine aminopeptidase 1B, | 0.898 | 0.739 | 0.799 | 1e-127 | |
| 224099327 | 299 | predicted protein [Populus trichocarpa] | 0.779 | 0.792 | 0.898 | 1e-124 | |
| 356499713 | 366 | PREDICTED: methionine aminopeptidase 1B, | 0.898 | 0.745 | 0.789 | 1e-124 | |
| 225423897 | 368 | PREDICTED: methionine aminopeptidase 1B, | 0.996 | 0.823 | 0.765 | 1e-123 | |
| 297844232 | 369 | hypothetical protein ARALYDRAFT_471483 [ | 0.907 | 0.747 | 0.773 | 1e-122 | |
| 357488339 | 364 | Methionine aminopeptidase [Medicago trun | 0.855 | 0.714 | 0.811 | 1e-121 |
| >gi|118488012|gb|ABK95827.1| unknown [Populus trichocarpa] | Back alignment and taxonomy information |
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Score = 481 bits (1238), Expect = e-133, Method: Compositional matrix adjust.
Identities = 232/275 (84%), Positives = 248/275 (90%), Gaps = 1/275 (0%)
Query: 30 ALFTGAPLSLSPSSTGRQARCPNKLVVHAKRISGLEEAMRIRRERELQTTTKFRKRPPLR 89
ALF+ P+S SP TG+ A+ +LVV +KR+S LEE MRIRRERELQ T KFRKRPPLR
Sbjct: 30 ALFSVTPVSFSPP-TGKNAQYRKRLVVLSKRVSPLEEGMRIRRERELQKTVKFRKRPPLR 88
Query: 90 RGRVSPRLPVPDHIPKPPYVSSTSLPDLSPEYQIHDSESIAKMRAACELAARVLDAAGKL 149
RGRVSPRLPVPD IPKPPY+ S LPD+S E+QIHDSE I KMRAACELAARVLD AGKL
Sbjct: 89 RGRVSPRLPVPDDIPKPPYLGSNELPDISSEHQIHDSEGIVKMRAACELAARVLDNAGKL 148
Query: 150 VRPSVTTNEIDKAVHQMIIEAGAYPSPLGYGGFPKSVCTSVNECMCHGIPDSRQLQDGDI 209
VRPSVTTNEIDKAVHQMII+AGAYPSPLGYGGFPKSVCTSVNECMCHGIPDSRQLQDGDI
Sbjct: 149 VRPSVTTNEIDKAVHQMIIDAGAYPSPLGYGGFPKSVCTSVNECMCHGIPDSRQLQDGDI 208
Query: 210 INIDVTVYLNGYHGDTSKTFLCGNVSDGLKRLVKVTEECLEKGIAVCKDGASFKKIGKRI 269
INIDVTVYLNGYHGDTSKTFLCGNV+D L RLVKVTEECLE+GIA+CKDGASFKKIGKRI
Sbjct: 209 INIDVTVYLNGYHGDTSKTFLCGNVNDALMRLVKVTEECLERGIALCKDGASFKKIGKRI 268
Query: 270 SEHAEKYGFGVVERFVGHGVGKVFHSEPIIYHNRK 304
SEHAEKYG+GVVERFVGHGVG VFHSEP+I HNR
Sbjct: 269 SEHAEKYGYGVVERFVGHGVGTVFHSEPLILHNRN 303
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Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255566855|ref|XP_002524411.1| methionine aminopeptidase, putative [Ricinus communis] gi|223536372|gb|EEF38022.1| methionine aminopeptidase, putative [Ricinus communis] | Back alignment and taxonomy information |
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| >gi|356495984|ref|XP_003516850.1| PREDICTED: methionine aminopeptidase 1B, chloroplastic-like [Glycine max] | Back alignment and taxonomy information |
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| >gi|449498639|ref|XP_004160592.1| PREDICTED: methionine aminopeptidase 1B, chloroplastic-like [Cucumis sativus] | Back alignment and taxonomy information |
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| >gi|449458896|ref|XP_004147182.1| PREDICTED: methionine aminopeptidase 1B, chloroplastic-like [Cucumis sativus] | Back alignment and taxonomy information |
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| >gi|224099327|ref|XP_002311439.1| predicted protein [Populus trichocarpa] gi|222851259|gb|EEE88806.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
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| >gi|356499713|ref|XP_003518681.1| PREDICTED: methionine aminopeptidase 1B, chloroplastic-like [Glycine max] | Back alignment and taxonomy information |
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| >gi|225423897|ref|XP_002278748.1| PREDICTED: methionine aminopeptidase 1B, chloroplastic [Vitis vinifera] gi|297737860|emb|CBI27061.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|297844232|ref|XP_002889997.1| hypothetical protein ARALYDRAFT_471483 [Arabidopsis lyrata subsp. lyrata] gi|297335839|gb|EFH66256.1| hypothetical protein ARALYDRAFT_471483 [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
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| >gi|357488339|ref|XP_003614457.1| Methionine aminopeptidase [Medicago truncatula] gi|355515792|gb|AES97415.1| Methionine aminopeptidase [Medicago truncatula] | Back alignment and taxonomy information |
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Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 304 | ||||||
| TAIR|locus:2205329 | 369 | MAP1C "methionine aminopeptida | 0.904 | 0.745 | 0.772 | 1.1e-112 | |
| TAIR|locus:2085979 | 344 | MAP1B "methionine aminopeptida | 0.786 | 0.694 | 0.727 | 1.2e-90 | |
| TAIR|locus:2115125 | 350 | MAP1D "methionine aminopeptida | 0.799 | 0.694 | 0.621 | 1.4e-78 | |
| DICTYBASE|DDB_G0280127 | 404 | map1d "methionine aminopeptida | 0.792 | 0.596 | 0.506 | 1.5e-60 | |
| UNIPROTKB|F1P5C7 | 320 | METAP1D "Methionine aminopepti | 0.690 | 0.656 | 0.561 | 1.5e-60 | |
| UNIPROTKB|F1PFF1 | 451 | METAP1D "Methionine aminopepti | 0.799 | 0.538 | 0.507 | 1.5e-60 | |
| UNIPROTKB|F1S085 | 338 | METAP1D "Methionine aminopepti | 0.802 | 0.721 | 0.498 | 2.4e-60 | |
| UNIPROTKB|F1MKP7 | 331 | METAP1D "Methionine aminopepti | 0.802 | 0.737 | 0.498 | 6.4e-60 | |
| UNIPROTKB|Q6UB28 | 335 | METAP1D "Methionine aminopepti | 0.802 | 0.728 | 0.494 | 8.1e-60 | |
| RGD|1307413 | 334 | Metap1d "methionyl aminopeptid | 0.690 | 0.628 | 0.552 | 3.5e-59 |
| TAIR|locus:2205329 MAP1C "methionine aminopeptidase 1B" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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Score = 1112 (396.5 bits), Expect = 1.1e-112, P = 1.1e-112
Identities = 214/277 (77%), Positives = 239/277 (86%)
Query: 29 SALFTGAPL-SLSPSSTGRQ-ARCPNKLVVHAKRISGLEEAMRIRRERELQTTTKFRKRP 86
S F GAP+ S S S +G++ + P + V AK++SGLEEA+RIR+ REL+T +K R+ P
Sbjct: 30 SRCFLGAPVTSSSLSLSGKKNSYSPRQFHVSAKKVSGLEEAIRIRKMRELETKSKVRRNP 89
Query: 87 PLRRGRVSPRLPVPDHIPKPPYVSSTSLPDLSPEYQIHDSESIAKMRAACELAARVLDAA 146
PLRRGRVSPRL VPDHIP+PPYV S LPD+S E+QI E IAKMRAACELAARVL+ A
Sbjct: 90 PLRRGRVSPRLLVPDHIPRPPYVESGVLPDISSEFQIPGPEGIAKMRAACELAARVLNYA 149
Query: 147 GKLVRPSVTTNEIDKAVHQMIIEAGAYPSPLGYGGFPKSVCTSVNECMCHGIPDSRQLQD 206
G LV+PSVTTNEIDKAVH MIIEAGAYPSPLGYGGFPKSVCTSVNECMCHGIPDSRQLQ
Sbjct: 150 GTLVKPSVTTNEIDKAVHDMIIEAGAYPSPLGYGGFPKSVCTSVNECMCHGIPDSRQLQS 209
Query: 207 GDIINIDVTVYLNGYHGDTSKTFLCGNVSDGLKRLVKVTEECLEKGIAVCKDGASFKKIG 266
GDIINIDVTVYL+GYHGDTS+TF CG V +G KRLVKVTEECLE+GIAVCKDGASFKKIG
Sbjct: 210 GDIINIDVTVYLDGYHGDTSRTFFCGEVDEGFKRLVKVTEECLERGIAVCKDGASFKKIG 269
Query: 267 KRISEHAEKYGFGVVERFVGHGVGKVFHSEPIIYHNR 303
KRISEHAEK+G+ VVERFVGHGVG VFHSEP+IYH R
Sbjct: 270 KRISEHAEKFGYNVVERFVGHGVGPVFHSEPLIYHYR 306
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| TAIR|locus:2085979 MAP1B "methionine aminopeptidase 1C" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2115125 MAP1D "methionine aminopeptidase 1D" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| DICTYBASE|DDB_G0280127 map1d "methionine aminopeptidase" [Dictyostelium discoideum (taxid:44689)] | Back alignment and assigned GO terms |
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| UNIPROTKB|F1P5C7 METAP1D "Methionine aminopeptidase" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
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| UNIPROTKB|F1PFF1 METAP1D "Methionine aminopeptidase" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
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| UNIPROTKB|F1S085 METAP1D "Methionine aminopeptidase" [Sus scrofa (taxid:9823)] | Back alignment and assigned GO terms |
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| UNIPROTKB|F1MKP7 METAP1D "Methionine aminopeptidase" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
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| UNIPROTKB|Q6UB28 METAP1D "Methionine aminopeptidase 1D, mitochondrial" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
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| RGD|1307413 Metap1d "methionyl aminopeptidase type 1D (mitochondrial)" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
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Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
| ID | Name | Annotated EC number | Identity | Query coverage | Hit coverage | RBH(Q2H) | RBH(H2Q) |
| Q9CPW9 | AMP1D_MOUSE | 3, ., 4, ., 1, 1, ., 1, 8 | 0.5571 | 0.6907 | 0.6268 | yes | no |
| Q9FV52 | AMP1B_ARATH | 3, ., 4, ., 1, 1, ., 1, 8 | 0.7625 | 0.9078 | 0.7479 | yes | no |
| Q6UB28 | AMP1D_HUMAN | 3, ., 4, ., 1, 1, ., 1, 8 | 0.5571 | 0.6907 | 0.6268 | yes | no |
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
| Prediction Level | EC number | Confidence of Prediction |
| 3rd Layer | 3.4.11.18 | 0.946 |
| 3rd Layer | 3.4.11 | 0.963 |
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 304 | |||
| cd01086 | 238 | cd01086, MetAP1, Methionine Aminopeptidase 1 | 1e-100 | |
| PRK05716 | 252 | PRK05716, PRK05716, methionine aminopeptidase; Val | 5e-94 | |
| PLN03158 | 396 | PLN03158, PLN03158, methionine aminopeptidase; Pro | 3e-88 | |
| COG0024 | 255 | COG0024, Map, Methionine aminopeptidase [Translati | 2e-81 | |
| PRK12896 | 255 | PRK12896, PRK12896, methionine aminopeptidase; Rev | 2e-76 | |
| TIGR00500 | 247 | TIGR00500, met_pdase_I, methionine aminopeptidase, | 6e-73 | |
| PRK12318 | 291 | PRK12318, PRK12318, methionine aminopeptidase; Pro | 6e-62 | |
| pfam00557 | 208 | pfam00557, Peptidase_M24, Metallopeptidase family | 3e-51 | |
| cd01066 | 207 | cd01066, APP_MetAP, A family including aminopeptid | 1e-38 | |
| PRK12897 | 248 | PRK12897, PRK12897, methionine aminopeptidase; Rev | 3e-38 | |
| COG0006 | 384 | COG0006, PepP, Xaa-Pro aminopeptidase [Amino acid | 2e-28 | |
| cd01092 | 208 | cd01092, APP-like, Similar to Prolidase and Aminop | 9e-27 | |
| PRK07281 | 286 | PRK07281, PRK07281, methionine aminopeptidase; Rev | 1e-24 | |
| PRK08671 | 291 | PRK08671, PRK08671, methionine aminopeptidase; Pro | 2e-24 | |
| TIGR00501 | 295 | TIGR00501, met_pdase_II, methionine aminopeptidase | 5e-21 | |
| cd01088 | 291 | cd01088, MetAP2, Methionine Aminopeptidase 2 | 7e-20 | |
| cd01087 | 243 | cd01087, Prolidase, Prolidase | 2e-10 | |
| PRK10879 | 438 | PRK10879, PRK10879, proline aminopeptidase P II; P | 2e-07 | |
| cd01089 | 228 | cd01089, PA2G4-like, Related to aminopepdidase M, | 2e-07 | |
| TIGR00495 | 389 | TIGR00495, crvDNA_42K, 42K curved DNA binding prot | 8e-06 | |
| PRK09795 | 361 | PRK09795, PRK09795, aminopeptidase; Provisional | 1e-05 | |
| cd01090 | 228 | cd01090, Creatinase, Creatine amidinohydrolase | 8e-05 | |
| PRK14575 | 406 | PRK14575, PRK14575, putative peptidase; Provisiona | 2e-04 | |
| PRK15173 | 323 | PRK15173, PRK15173, peptidase; Provisional | 3e-04 |
| >gnl|CDD|238519 cd01086, MetAP1, Methionine Aminopeptidase 1 | Back alignment and domain information |
|---|
Score = 294 bits (755), Expect = e-100
Identities = 97/173 (56%), Positives = 122/173 (70%)
Query: 129 IAKMRAACELAARVLDAAGKLVRPSVTTNEIDKAVHQMIIEAGAYPSPLGYGGFPKSVCT 188
I MR A + A VLD K ++P VTT E+D+ H+ I E GAYP+PLGY GFPKS+CT
Sbjct: 1 IEGMREAGRIVAEVLDELAKAIKPGVTTKELDQIAHEFIEEHGAYPAPLGYYGFPKSICT 60
Query: 189 SVNECMCHGIPDSRQLQDGDIINIDVTVYLNGYHGDTSKTFLCGNVSDGLKRLVKVTEEC 248
SVNE +CHGIPD R L+DGDI+NIDV V L+GYHGD+++TF+ G VS+ K+LV+VTEE
Sbjct: 61 SVNEVVCHGIPDDRVLKDGDIVNIDVGVELDGYHGDSARTFIVGEVSEEAKKLVEVTEEA 120
Query: 249 LEKGIAVCKDGASFKKIGKRISEHAEKYGFGVVERFVGHGVGKVFHSEPIIYH 301
L KGI K G IG I ++AEK G+ VV F GHG+G+ FH EP I +
Sbjct: 121 LYKGIEAVKPGNRIGDIGHAIEKYAEKNGYSVVREFGGHGIGRKFHEEPQIPN 173
|
E.C. 3.4.11.18. Also known as methionyl aminopeptidase and Peptidase M. Catalyzes release of N-terminal amino acids, preferentially methionine, from peptides and arylamides. Length = 238 |
| >gnl|CDD|235576 PRK05716, PRK05716, methionine aminopeptidase; Validated | Back alignment and domain information |
|---|
| >gnl|CDD|215607 PLN03158, PLN03158, methionine aminopeptidase; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|223103 COG0024, Map, Methionine aminopeptidase [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
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| >gnl|CDD|237252 PRK12896, PRK12896, methionine aminopeptidase; Reviewed | Back alignment and domain information |
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| >gnl|CDD|129591 TIGR00500, met_pdase_I, methionine aminopeptidase, type I | Back alignment and domain information |
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| >gnl|CDD|183434 PRK12318, PRK12318, methionine aminopeptidase; Provisional | Back alignment and domain information |
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| >gnl|CDD|215993 pfam00557, Peptidase_M24, Metallopeptidase family M24 | Back alignment and domain information |
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| >gnl|CDD|238514 cd01066, APP_MetAP, A family including aminopeptidase P, aminopeptidase M, and prolidase | Back alignment and domain information |
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| >gnl|CDD|171806 PRK12897, PRK12897, methionine aminopeptidase; Reviewed | Back alignment and domain information |
|---|
| >gnl|CDD|223085 COG0006, PepP, Xaa-Pro aminopeptidase [Amino acid transport and metabolism] | Back alignment and domain information |
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| >gnl|CDD|238525 cd01092, APP-like, Similar to Prolidase and Aminopeptidase P | Back alignment and domain information |
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| >gnl|CDD|180918 PRK07281, PRK07281, methionine aminopeptidase; Reviewed | Back alignment and domain information |
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| >gnl|CDD|181534 PRK08671, PRK08671, methionine aminopeptidase; Provisional | Back alignment and domain information |
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| >gnl|CDD|129592 TIGR00501, met_pdase_II, methionine aminopeptidase, type II | Back alignment and domain information |
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| >gnl|CDD|238521 cd01088, MetAP2, Methionine Aminopeptidase 2 | Back alignment and domain information |
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| >gnl|CDD|238520 cd01087, Prolidase, Prolidase | Back alignment and domain information |
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| >gnl|CDD|182804 PRK10879, PRK10879, proline aminopeptidase P II; Provisional | Back alignment and domain information |
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| >gnl|CDD|238522 cd01089, PA2G4-like, Related to aminopepdidase M, this family contains proliferation-associated protein 2G4 | Back alignment and domain information |
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| >gnl|CDD|129586 TIGR00495, crvDNA_42K, 42K curved DNA binding protein | Back alignment and domain information |
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| >gnl|CDD|182080 PRK09795, PRK09795, aminopeptidase; Provisional | Back alignment and domain information |
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| >gnl|CDD|238523 cd01090, Creatinase, Creatine amidinohydrolase | Back alignment and domain information |
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| >gnl|CDD|173039 PRK14575, PRK14575, putative peptidase; Provisional | Back alignment and domain information |
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| >gnl|CDD|185095 PRK15173, PRK15173, peptidase; Provisional | Back alignment and domain information |
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Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 304 | |||
| KOG2738 | 369 | consensus Putative methionine aminopeptidase [Post | 100.0 | |
| PLN03158 | 396 | methionine aminopeptidase; Provisional | 100.0 | |
| COG0024 | 255 | Map Methionine aminopeptidase [Translation, riboso | 100.0 | |
| PRK12318 | 291 | methionine aminopeptidase; Provisional | 100.0 | |
| PRK12897 | 248 | methionine aminopeptidase; Reviewed | 100.0 | |
| PRK07281 | 286 | methionine aminopeptidase; Reviewed | 100.0 | |
| TIGR00500 | 247 | met_pdase_I methionine aminopeptidase, type I. Met | 100.0 | |
| PRK12896 | 255 | methionine aminopeptidase; Reviewed | 100.0 | |
| PRK05716 | 252 | methionine aminopeptidase; Validated | 100.0 | |
| PRK09795 | 361 | aminopeptidase; Provisional | 100.0 | |
| COG0006 | 384 | PepP Xaa-Pro aminopeptidase [Amino acid transport | 100.0 | |
| cd01086 | 238 | MetAP1 Methionine Aminopeptidase 1. E.C. 3.4.11.18 | 100.0 | |
| PRK10879 | 438 | proline aminopeptidase P II; Provisional | 100.0 | |
| PRK15173 | 323 | peptidase; Provisional | 100.0 | |
| PRK14575 | 406 | putative peptidase; Provisional | 100.0 | |
| TIGR02993 | 391 | ectoine_eutD ectoine utilization protein EutD. Mem | 100.0 | |
| cd01090 | 228 | Creatinase Creatine amidinohydrolase. E.C.3.5.3.3. | 100.0 | |
| cd01087 | 243 | Prolidase Prolidase. E.C. 3.4.13.9. Also known as | 100.0 | |
| PRK14576 | 405 | putative endopeptidase; Provisional | 100.0 | |
| cd01092 | 208 | APP-like Similar to Prolidase and Aminopeptidase P | 100.0 | |
| TIGR00495 | 389 | crvDNA_42K 42K curved DNA binding protein. Protein | 100.0 | |
| PF00557 | 207 | Peptidase_M24: Metallopeptidase family M24 This Pr | 100.0 | |
| PRK13607 | 443 | proline dipeptidase; Provisional | 100.0 | |
| PTZ00053 | 470 | methionine aminopeptidase 2; Provisional | 100.0 | |
| cd01066 | 207 | APP_MetAP A family including aminopeptidase P, ami | 100.0 | |
| cd01085 | 224 | APP X-Prolyl Aminopeptidase 2. E.C. 3.4.11.9. Also | 100.0 | |
| PRK08671 | 291 | methionine aminopeptidase; Provisional | 100.0 | |
| TIGR00501 | 295 | met_pdase_II methionine aminopeptidase, type II. M | 99.98 | |
| cd01088 | 291 | MetAP2 Methionine Aminopeptidase 2. E.C. 3.4.11.18 | 99.97 | |
| cd01091 | 243 | CDC68-like Related to aminopeptidase P and aminope | 99.97 | |
| cd01089 | 228 | PA2G4-like Related to aminopepdidase M, this famil | 99.97 | |
| KOG2414 | 488 | consensus Putative Xaa-Pro aminopeptidase [Amino a | 99.95 | |
| KOG2737 | 492 | consensus Putative metallopeptidase [General funct | 99.95 | |
| KOG1189 | 960 | consensus Global transcriptional regulator, cell d | 99.8 | |
| KOG2413 | 606 | consensus Xaa-Pro aminopeptidase [Amino acid trans | 99.7 | |
| KOG2776 | 398 | consensus Metallopeptidase [General function predi | 99.63 | |
| KOG2775 | 397 | consensus Metallopeptidase [General function predi | 99.52 | |
| COG5406 | 1001 | Nucleosome binding factor SPN, SPT16 subunit [Tran | 99.49 | |
| cd01066 | 207 | APP_MetAP A family including aminopeptidase P, ami | 97.37 | |
| PRK05716 | 252 | methionine aminopeptidase; Validated | 97.17 | |
| cd01092 | 208 | APP-like Similar to Prolidase and Aminopeptidase P | 97.14 | |
| TIGR00500 | 247 | met_pdase_I methionine aminopeptidase, type I. Met | 97.03 | |
| cd01086 | 238 | MetAP1 Methionine Aminopeptidase 1. E.C. 3.4.11.18 | 96.94 | |
| PRK15173 | 323 | peptidase; Provisional | 96.9 | |
| PRK12897 | 248 | methionine aminopeptidase; Reviewed | 96.81 | |
| PRK14575 | 406 | putative peptidase; Provisional | 96.75 | |
| PRK14576 | 405 | putative endopeptidase; Provisional | 96.69 | |
| PRK08671 | 291 | methionine aminopeptidase; Provisional | 96.64 | |
| PRK12896 | 255 | methionine aminopeptidase; Reviewed | 96.62 | |
| cd01088 | 291 | MetAP2 Methionine Aminopeptidase 2. E.C. 3.4.11.18 | 96.56 | |
| cd01091 | 243 | CDC68-like Related to aminopeptidase P and aminope | 96.56 | |
| PRK12318 | 291 | methionine aminopeptidase; Provisional | 96.55 | |
| cd01090 | 228 | Creatinase Creatine amidinohydrolase. E.C.3.5.3.3. | 96.5 | |
| PRK07281 | 286 | methionine aminopeptidase; Reviewed | 96.46 | |
| TIGR02993 | 391 | ectoine_eutD ectoine utilization protein EutD. Mem | 96.43 | |
| PRK09795 | 361 | aminopeptidase; Provisional | 96.28 | |
| cd01089 | 228 | PA2G4-like Related to aminopepdidase M, this famil | 96.18 | |
| PLN03158 | 396 | methionine aminopeptidase; Provisional | 96.17 | |
| cd01087 | 243 | Prolidase Prolidase. E.C. 3.4.13.9. Also known as | 95.91 | |
| PF00557 | 207 | Peptidase_M24: Metallopeptidase family M24 This Pr | 95.91 | |
| TIGR00501 | 295 | met_pdase_II methionine aminopeptidase, type II. M | 95.84 | |
| TIGR00495 | 389 | crvDNA_42K 42K curved DNA binding protein. Protein | 95.41 | |
| COG0024 | 255 | Map Methionine aminopeptidase [Translation, riboso | 95.2 | |
| COG0006 | 384 | PepP Xaa-Pro aminopeptidase [Amino acid transport | 95.07 | |
| PTZ00053 | 470 | methionine aminopeptidase 2; Provisional | 94.31 | |
| KOG2738 | 369 | consensus Putative methionine aminopeptidase [Post | 93.65 | |
| PRK10879 | 438 | proline aminopeptidase P II; Provisional | 93.03 | |
| cd01085 | 224 | APP X-Prolyl Aminopeptidase 2. E.C. 3.4.11.9. Also | 91.13 | |
| PRK13607 | 443 | proline dipeptidase; Provisional | 86.04 |
| >KOG2738 consensus Putative methionine aminopeptidase [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-67 Score=472.65 Aligned_cols=237 Identities=62% Similarity=1.031 Sum_probs=224.3
Q ss_pred HHHHHhhhhccCCCCCCCCCCccccCCCCccCCCCCCCCCcccCCCC----CCCCc-ccccCCHHHHHHHHHHHHHHHHH
Q 021989 68 MRIRRERELQTTTKFRKRPPLRRGRVSPRLPVPDHIPKPPYVSSTSL----PDLSP-EYQIHDSESIAKMRAACELAARV 142 (304)
Q Consensus 68 ~~~~~~~~~~~~~~~~~~~~l~~g~~s~~~~vp~~i~~p~y~~~~~~----~~l~~-~R~vKs~~EIe~mR~A~~ia~~~ 142 (304)
+.+...+++++++.|.|+++||||++||+++||++|++|+|++.+.+ +.... ...+++++||+.||+||++++++
T Consensus 56 ~~~~~~g~~~p~p~~~~~g~Lr~~pvsprr~VP~hI~rPdya~~g~s~se~~~~~s~~i~i~~~e~ie~mR~ac~Larev 135 (369)
T KOG2738|consen 56 LRIRKEGQYNPWPKFRFTGPLRPGPVSPRRPVPDHIPRPDYADSGVSLSEQPEISSNEIKILDPEGIEGMRKACRLAREV 135 (369)
T ss_pred hhhhhhccCCCCccccccCCccccCCCCCCcCCccCCCCchhhcCCcccccccccccceeccCHHHHHHHHHHHHHHHHH
Confidence 34455667888999999999999999999999999999999987443 22222 35689999999999999999999
Q ss_pred HHHHHHhcCCCCcHHHHHHHHHHHHHHcCCCCCCCCCCCCCCeeeecCCCCcccCCCCCCCCCCCCEEEEEeecccCcEE
Q 021989 143 LDAAGKLVRPSVTTNEIDKAVHQMIIEAGAYPSPLGYGGFPKSVCTSVNECMCHGIPDSRQLQDGDIINIDVTVYLNGYH 222 (304)
Q Consensus 143 l~~~~~~i~pGvTe~eI~~~~~~~~~~~G~~ps~l~y~gfp~~v~sg~n~~~~H~~p~~r~l~~GDiv~iD~~~~~~GY~ 222 (304)
++++..+++||||++|||+++|++++++|+|||+|||++||+++|+|+|+++|||+||.|+|++||||+||++++++|||
T Consensus 136 Ld~Aa~~v~PgvTTdEiD~~VH~a~Ierg~YPSPLnYy~FPKS~CTSVNEviCHGIPD~RpLedGDIvNiDVtvY~~GyH 215 (369)
T KOG2738|consen 136 LDYAATLVRPGVTTDEIDRAVHNAIIERGAYPSPLNYYGFPKSVCTSVNEVICHGIPDSRPLEDGDIVNIDVTVYLNGYH 215 (369)
T ss_pred HHHHhhhcCCCccHHHHHHHHHHHHHhcCCcCCCcccCCCchhhhcchhheeecCCCCcCcCCCCCEEeEEEEEEecccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eceeeeEEccCCCHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHHHcCCCccCcceeeecCCCCccCCCcCCC
Q 021989 223 GDTSKTFLCGNVSDGLKRLVKVTEECLEKGIAVCKDGASFKKIGKRISEHAEKYGFGVVERFVGHGVGKVFHSEPIIYHN 302 (304)
Q Consensus 223 ~D~sRT~~vG~~~~e~~~l~~~~~ea~~~~i~~~kPG~~~~dI~~~i~~~~~~~G~~~~~~~~GHgIG~~~he~P~i~~~ 302 (304)
+|+++||+||+++++.++|+++++||++.||++||||++|++|++.|++++.++||++++.|+|||||..||..|+|+||
T Consensus 216 GDlneTffvG~Vde~~k~LVkvT~EcL~kaI~~~kpGv~freiG~iI~kha~~~g~sVVr~ycGHGig~~FH~~PnipHy 295 (369)
T KOG2738|consen 216 GDLNETFFVGNVDEKAKKLVKVTRECLEKAIAIVKPGVSFREIGNIIQKHATKNGYSVVRSYCGHGIGRVFHCAPNIPHY 295 (369)
T ss_pred CccccceEeeccCHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHhhhcCceeehhhhccccccccccCCCchhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CC
Q 021989 303 RK 304 (304)
Q Consensus 303 ~n 304 (304)
.|
T Consensus 296 a~ 297 (369)
T KOG2738|consen 296 AK 297 (369)
T ss_pred cc
Confidence 86
|
|
| >PLN03158 methionine aminopeptidase; Provisional | Back alignment and domain information |
|---|
| >COG0024 Map Methionine aminopeptidase [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
| >PRK12318 methionine aminopeptidase; Provisional | Back alignment and domain information |
|---|
| >PRK12897 methionine aminopeptidase; Reviewed | Back alignment and domain information |
|---|
| >PRK07281 methionine aminopeptidase; Reviewed | Back alignment and domain information |
|---|
| >TIGR00500 met_pdase_I methionine aminopeptidase, type I | Back alignment and domain information |
|---|
| >PRK12896 methionine aminopeptidase; Reviewed | Back alignment and domain information |
|---|
| >PRK05716 methionine aminopeptidase; Validated | Back alignment and domain information |
|---|
| >PRK09795 aminopeptidase; Provisional | Back alignment and domain information |
|---|
| >COG0006 PepP Xaa-Pro aminopeptidase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
| >cd01086 MetAP1 Methionine Aminopeptidase 1 | Back alignment and domain information |
|---|
| >PRK10879 proline aminopeptidase P II; Provisional | Back alignment and domain information |
|---|
| >PRK15173 peptidase; Provisional | Back alignment and domain information |
|---|
| >PRK14575 putative peptidase; Provisional | Back alignment and domain information |
|---|
| >TIGR02993 ectoine_eutD ectoine utilization protein EutD | Back alignment and domain information |
|---|
| >cd01090 Creatinase Creatine amidinohydrolase | Back alignment and domain information |
|---|
| >cd01087 Prolidase Prolidase | Back alignment and domain information |
|---|
| >PRK14576 putative endopeptidase; Provisional | Back alignment and domain information |
|---|
| >cd01092 APP-like Similar to Prolidase and Aminopeptidase P | Back alignment and domain information |
|---|
| >TIGR00495 crvDNA_42K 42K curved DNA binding protein | Back alignment and domain information |
|---|
| >PF00557 Peptidase_M24: Metallopeptidase family M24 This Prosite entry corresponds to sub-family M24B This Prosite entry corresponds to sub-families M24A and M24C; InterPro: IPR000994 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families | Back alignment and domain information |
|---|
| >PRK13607 proline dipeptidase; Provisional | Back alignment and domain information |
|---|
| >PTZ00053 methionine aminopeptidase 2; Provisional | Back alignment and domain information |
|---|
| >cd01066 APP_MetAP A family including aminopeptidase P, aminopeptidase M, and prolidase | Back alignment and domain information |
|---|
| >cd01085 APP X-Prolyl Aminopeptidase 2 | Back alignment and domain information |
|---|
| >PRK08671 methionine aminopeptidase; Provisional | Back alignment and domain information |
|---|
| >TIGR00501 met_pdase_II methionine aminopeptidase, type II | Back alignment and domain information |
|---|
| >cd01088 MetAP2 Methionine Aminopeptidase 2 | Back alignment and domain information |
|---|
| >cd01091 CDC68-like Related to aminopeptidase P and aminopeptidase M, a member of this domain family is present in cell division control protein 68, a transcription factor | Back alignment and domain information |
|---|
| >cd01089 PA2G4-like Related to aminopepdidase M, this family contains proliferation-associated protein 2G4 | Back alignment and domain information |
|---|
| >KOG2414 consensus Putative Xaa-Pro aminopeptidase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
| >KOG2737 consensus Putative metallopeptidase [General function prediction only] | Back alignment and domain information |
|---|
| >KOG1189 consensus Global transcriptional regulator, cell division control protein [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
| >KOG2413 consensus Xaa-Pro aminopeptidase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
| >KOG2776 consensus Metallopeptidase [General function prediction only] | Back alignment and domain information |
|---|
| >KOG2775 consensus Metallopeptidase [General function prediction only] | Back alignment and domain information |
|---|
| >COG5406 Nucleosome binding factor SPN, SPT16 subunit [Transcription / DNA replication, recombination, and repair / Chromatin structure and dynamics] | Back alignment and domain information |
|---|
| >cd01066 APP_MetAP A family including aminopeptidase P, aminopeptidase M, and prolidase | Back alignment and domain information |
|---|
| >PRK05716 methionine aminopeptidase; Validated | Back alignment and domain information |
|---|
| >cd01092 APP-like Similar to Prolidase and Aminopeptidase P | Back alignment and domain information |
|---|
| >TIGR00500 met_pdase_I methionine aminopeptidase, type I | Back alignment and domain information |
|---|
| >cd01086 MetAP1 Methionine Aminopeptidase 1 | Back alignment and domain information |
|---|
| >PRK15173 peptidase; Provisional | Back alignment and domain information |
|---|
| >PRK12897 methionine aminopeptidase; Reviewed | Back alignment and domain information |
|---|
| >PRK14575 putative peptidase; Provisional | Back alignment and domain information |
|---|
| >PRK14576 putative endopeptidase; Provisional | Back alignment and domain information |
|---|
| >PRK08671 methionine aminopeptidase; Provisional | Back alignment and domain information |
|---|
| >PRK12896 methionine aminopeptidase; Reviewed | Back alignment and domain information |
|---|
| >cd01088 MetAP2 Methionine Aminopeptidase 2 | Back alignment and domain information |
|---|
| >cd01091 CDC68-like Related to aminopeptidase P and aminopeptidase M, a member of this domain family is present in cell division control protein 68, a transcription factor | Back alignment and domain information |
|---|
| >PRK12318 methionine aminopeptidase; Provisional | Back alignment and domain information |
|---|
| >cd01090 Creatinase Creatine amidinohydrolase | Back alignment and domain information |
|---|
| >PRK07281 methionine aminopeptidase; Reviewed | Back alignment and domain information |
|---|
| >TIGR02993 ectoine_eutD ectoine utilization protein EutD | Back alignment and domain information |
|---|
| >PRK09795 aminopeptidase; Provisional | Back alignment and domain information |
|---|
| >cd01089 PA2G4-like Related to aminopepdidase M, this family contains proliferation-associated protein 2G4 | Back alignment and domain information |
|---|
| >PLN03158 methionine aminopeptidase; Provisional | Back alignment and domain information |
|---|
| >cd01087 Prolidase Prolidase | Back alignment and domain information |
|---|
| >PF00557 Peptidase_M24: Metallopeptidase family M24 This Prosite entry corresponds to sub-family M24B This Prosite entry corresponds to sub-families M24A and M24C; InterPro: IPR000994 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families | Back alignment and domain information |
|---|
| >TIGR00501 met_pdase_II methionine aminopeptidase, type II | Back alignment and domain information |
|---|
| >TIGR00495 crvDNA_42K 42K curved DNA binding protein | Back alignment and domain information |
|---|
| >COG0024 Map Methionine aminopeptidase [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
| >COG0006 PepP Xaa-Pro aminopeptidase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
| >PTZ00053 methionine aminopeptidase 2; Provisional | Back alignment and domain information |
|---|
| >KOG2738 consensus Putative methionine aminopeptidase [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >PRK10879 proline aminopeptidase P II; Provisional | Back alignment and domain information |
|---|
| >cd01085 APP X-Prolyl Aminopeptidase 2 | Back alignment and domain information |
|---|
| >PRK13607 proline dipeptidase; Provisional | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 304 | ||||
| 4fli_A | 326 | Human Metap1 With Bengamide Analog Y16, In Mn Form | 5e-55 | ||
| 2b3h_A | 329 | Crystal Structure Of Human Methionine Aminopeptidas | 7e-55 | ||
| 2g6p_A | 304 | Crystal Structure Of Truncated (Delta 1-89) Human M | 8e-55 | ||
| 4fuk_A | 337 | Aminopeptidase From Trypanosoma Brucei Length = 337 | 3e-53 | ||
| 3iu7_A | 288 | M. Tuberculosis Methionine Aminopeptidase With Mn I | 9e-53 | ||
| 1y1n_A | 291 | Identification Of Sh3 Motif In M. Tuberculosis Meth | 9e-53 | ||
| 3pka_A | 285 | M. Tuberculosis Metap With Bengamide Analog Y02, In | 9e-53 | ||
| 3ror_A | 291 | Crystal Structure Of C105s Mutant Of Mycobacterium | 1e-51 | ||
| 3s6b_A | 368 | Crystal Structure Of Methionine Aminopeptidase 1b F | 1e-48 | ||
| 3mx6_A | 262 | Crystal Structure Of Methionine Aminopeptidase From | 4e-47 | ||
| 3mr1_A | 252 | Crystal Structure Of Methionine Aminopeptidase From | 6e-47 | ||
| 4mat_A | 278 | E.Coli Methionine Aminopeptidase His79ala Mutant Le | 4e-40 | ||
| 2gg0_A | 263 | Novel Bacterial Methionine Aminopeptidase Inhibitor | 5e-40 | ||
| 1xnz_A | 264 | Crystal Structure Of Mn(Ii) Form Of E. Coli. Methio | 5e-40 | ||
| 2gu4_A | 263 | E. Coli Methionine Aminopeptidase In Complex With N | 5e-40 | ||
| 2gtx_A | 261 | Structural Basis Of Catalysis By Mononuclear Methio | 5e-40 | ||
| 4a6v_A | 265 | X-Ray Structures Of Oxazole Hydroxamate Ecmetap-Mn | 5e-40 | ||
| 1c27_A | 263 | E. Coli Methionine Aminopeptidase:norleucine Phosph | 5e-40 | ||
| 2p98_A | 262 | E. Coli Methionine Aminopeptidase Monometalated Wit | 5e-40 | ||
| 2mat_A | 264 | E.Coli Methionine Aminopeptidase At 1.9 Angstrom Re | 5e-40 | ||
| 2p99_A | 261 | E. Coli Methionine Aminopeptidase Monometalated Wit | 6e-40 | ||
| 3mat_A | 265 | E.coli Methionine Aminopeptidase Transition-state I | 6e-40 | ||
| 3tav_A | 286 | Crystal Structure Of A Methionine Aminopeptidase Fr | 5e-28 | ||
| 3tb5_A | 264 | Crystal Structure Of The Enterococcus Faecalis Meth | 2e-25 | ||
| 1qxw_A | 252 | Crystal Structure Of Staphyloccocus Aureus In Compl | 2e-25 | ||
| 1o0x_A | 262 | Crystal Structure Of Methionine Aminopeptidase (Tm1 | 3e-25 | ||
| 1xgs_A | 295 | Methionine Aminopeptidase From Hyperthermophile Pyr | 5e-17 | ||
| 2dfi_A | 301 | Crystal Structure Of Pf-Map(1-292)-C Length = 301 | 5e-17 | ||
| 3q6d_A | 356 | Xaa-Pro Dipeptidase From Bacillus Anthracis. Length | 7e-11 | ||
| 1pv9_A | 348 | Prolidase From Pyrococcus Furiosus Length = 348 | 3e-10 | ||
| 1wn1_A | 356 | Crystal Structure Of Dipeptiase From Pyrococcus Hor | 2e-09 | ||
| 1wy2_A | 351 | Crystal Structure Of The Prolidase From Pyrococcus | 3e-09 | ||
| 1wl9_A | 440 | Structure Of Aminopeptidase P From E. Coli Length = | 1e-08 | ||
| 2v3z_A | 440 | Glu383ala Escherichia Coli Aminopeptidase P In Comp | 2e-08 | ||
| 2bwv_A | 440 | His361ala Escherichia Coli Aminopeptidase P Length | 2e-08 | ||
| 1m35_A | 440 | Aminopeptidase P From Escherichia Coli Length = 440 | 4e-08 | ||
| 2bwy_A | 440 | Glu383ala Escherichia Coli Aminopeptidase P Length | 4e-08 | ||
| 1jaw_A | 440 | Aminopeptidase P From E. Coli Low Ph Form Length = | 5e-08 | ||
| 2bww_A | 440 | His350ala Escherichia Coli Aminopeptidase P Length | 5e-08 | ||
| 2zsg_A | 359 | Crystal Structure Of X-Pro Aminopeptidase From Ther | 5e-08 | ||
| 2bws_A | 440 | His243ala Escherichia Coli Aminopeptidase P Length | 2e-07 | ||
| 2bwt_A | 440 | Asp260ala Escherichia Coli Aminopeptidase P Length | 4e-07 | ||
| 2bwu_A | 440 | Asp271ala Escherichia Coli Aminopeptidase P Length | 4e-07 | ||
| 2bwx_A | 441 | His354ala Escherichia Coli Aminopeptidase P Length | 5e-07 | ||
| 4fkc_A | 377 | Recombinant Prolidase From Thermococcus Sibiricus L | 5e-07 | ||
| 2v6c_A | 353 | Crystal Structure Of Erbb3 Binding Protein 1 (Ebp1) | 6e-06 | ||
| 3j2i_A | 394 | Structure Of Late Pre-60s Ribosomal Subunits With N | 2e-05 | ||
| 2q8k_A | 401 | The Crystal Structure Of Ebp1 Length = 401 | 2e-05 | ||
| 4ege_A | 378 | Crystal Structure Of Dipeptidase Pepe From Mycobact | 3e-05 | ||
| 1chm_B | 401 | Enzymatic Mechanism Of Creatine Amidinohydrolase As | 3e-04 | ||
| 1chm_A | 401 | Enzymatic Mechanism Of Creatine Amidinohydrolase As | 3e-04 |
| >pdb|4FLI|A Chain A, Human Metap1 With Bengamide Analog Y16, In Mn Form Length = 326 | Back alignment and structure |
|
| >pdb|2B3H|A Chain A, Crystal Structure Of Human Methionine Aminopeptidase Type I With A Third Cobalt In The Active Site Length = 329 | Back alignment and structure |
| >pdb|2G6P|A Chain A, Crystal Structure Of Truncated (Delta 1-89) Human Methionine Aminopeptidase Type 1 In Complex With Pyridyl Pyrimidine Derivative Length = 304 | Back alignment and structure |
| >pdb|4FUK|A Chain A, Aminopeptidase From Trypanosoma Brucei Length = 337 | Back alignment and structure |
| >pdb|3IU7|A Chain A, M. Tuberculosis Methionine Aminopeptidase With Mn Inhibitor A02 Length = 288 | Back alignment and structure |
| >pdb|1Y1N|A Chain A, Identification Of Sh3 Motif In M. Tuberculosis Methionine Aminopeptidase Suggests A Mode Of Interaction With The Ribosome Length = 291 | Back alignment and structure |
| >pdb|3PKA|A Chain A, M. Tuberculosis Metap With Bengamide Analog Y02, In Mn Form Length = 285 | Back alignment and structure |
| >pdb|3ROR|A Chain A, Crystal Structure Of C105s Mutant Of Mycobacterium Tuberculosis Methionine Aminopeptidase Length = 291 | Back alignment and structure |
| >pdb|3S6B|A Chain A, Crystal Structure Of Methionine Aminopeptidase 1b From Plasmodium Falciparum, Pf10_0150 Length = 368 | Back alignment and structure |
| >pdb|3MX6|A Chain A, Crystal Structure Of Methionine Aminopeptidase From Ricketts Prowazekii Bound To Methionine Length = 262 | Back alignment and structure |
| >pdb|3MR1|A Chain A, Crystal Structure Of Methionine Aminopeptidase From Ricketts Prowazekii Length = 252 | Back alignment and structure |
| >pdb|4MAT|A Chain A, E.Coli Methionine Aminopeptidase His79ala Mutant Length = 278 | Back alignment and structure |
| >pdb|2GG0|A Chain A, Novel Bacterial Methionine Aminopeptidase Inhibitors Length = 263 | Back alignment and structure |
| >pdb|1XNZ|A Chain A, Crystal Structure Of Mn(Ii) Form Of E. Coli. Methionine Aminopeptidase In Complex With 5-(2-Chlorophenyl)furan-2- Carboxylic Acid Length = 264 | Back alignment and structure |
| >pdb|2GU4|A Chain A, E. Coli Methionine Aminopeptidase In Complex With Nlep, 1: 0.5, Di-Metalated Length = 263 | Back alignment and structure |
| >pdb|2GTX|A Chain A, Structural Basis Of Catalysis By Mononuclear Methionine Aminopeptidase Length = 261 | Back alignment and structure |
| >pdb|4A6V|A Chain A, X-Ray Structures Of Oxazole Hydroxamate Ecmetap-Mn Complexes Length = 265 | Back alignment and structure |
| >pdb|1C27|A Chain A, E. Coli Methionine Aminopeptidase:norleucine Phosphonate Complex Length = 263 | Back alignment and structure |
| >pdb|2P98|A Chain A, E. Coli Methionine Aminopeptidase Monometalated With Inhibitor Ye7 Length = 262 | Back alignment and structure |
| >pdb|2MAT|A Chain A, E.Coli Methionine Aminopeptidase At 1.9 Angstrom Resolution Length = 264 | Back alignment and structure |
| >pdb|2P99|A Chain A, E. Coli Methionine Aminopeptidase Monometalated With Inhibitor Ye6 Length = 261 | Back alignment and structure |
| >pdb|3MAT|A Chain A, E.coli Methionine Aminopeptidase Transition-state Inhibitor Complex Length = 265 | Back alignment and structure |
| >pdb|3TAV|A Chain A, Crystal Structure Of A Methionine Aminopeptidase From Mycobacterium Abscessus Length = 286 | Back alignment and structure |
| >pdb|3TB5|A Chain A, Crystal Structure Of The Enterococcus Faecalis Methionine Aminopeptidase Apo Form Length = 264 | Back alignment and structure |
| >pdb|1QXW|A Chain A, Crystal Structure Of Staphyloccocus Aureus In Complex With An Aminoketone Inhibitor 54135. Length = 252 | Back alignment and structure |
| >pdb|1O0X|A Chain A, Crystal Structure Of Methionine Aminopeptidase (Tm1478) From Thermotoga Maritima At 1.90 A Resolution Length = 262 | Back alignment and structure |
| >pdb|1XGS|A Chain A, Methionine Aminopeptidase From Hyperthermophile Pyrococcus Furiosus Length = 295 | Back alignment and structure |
| >pdb|2DFI|A Chain A, Crystal Structure Of Pf-Map(1-292)-C Length = 301 | Back alignment and structure |
| >pdb|3Q6D|A Chain A, Xaa-Pro Dipeptidase From Bacillus Anthracis. Length = 356 | Back alignment and structure |
| >pdb|1PV9|A Chain A, Prolidase From Pyrococcus Furiosus Length = 348 | Back alignment and structure |
| >pdb|1WN1|A Chain A, Crystal Structure Of Dipeptiase From Pyrococcus Horikoshii Ot3 Length = 356 | Back alignment and structure |
| >pdb|1WY2|A Chain A, Crystal Structure Of The Prolidase From Pyrococcus Horikoshii Ot3 Length = 351 | Back alignment and structure |
| >pdb|1WL9|A Chain A, Structure Of Aminopeptidase P From E. Coli Length = 440 | Back alignment and structure |
| >pdb|2V3Z|A Chain A, Glu383ala Escherichia Coli Aminopeptidase P In Complex With Substrate Length = 440 | Back alignment and structure |
| >pdb|2BWV|A Chain A, His361ala Escherichia Coli Aminopeptidase P Length = 440 | Back alignment and structure |
| >pdb|1M35|A Chain A, Aminopeptidase P From Escherichia Coli Length = 440 | Back alignment and structure |
| >pdb|2BWY|A Chain A, Glu383ala Escherichia Coli Aminopeptidase P Length = 440 | Back alignment and structure |
| >pdb|1JAW|A Chain A, Aminopeptidase P From E. Coli Low Ph Form Length = 440 | Back alignment and structure |
| >pdb|2BWW|A Chain A, His350ala Escherichia Coli Aminopeptidase P Length = 440 | Back alignment and structure |
| >pdb|2ZSG|A Chain A, Crystal Structure Of X-Pro Aminopeptidase From Thermotoga Maritima Msb8 Length = 359 | Back alignment and structure |
| >pdb|2BWS|A Chain A, His243ala Escherichia Coli Aminopeptidase P Length = 440 | Back alignment and structure |
| >pdb|2BWT|A Chain A, Asp260ala Escherichia Coli Aminopeptidase P Length = 440 | Back alignment and structure |
| >pdb|2BWU|A Chain A, Asp271ala Escherichia Coli Aminopeptidase P Length = 440 | Back alignment and structure |
| >pdb|4FKC|A Chain A, Recombinant Prolidase From Thermococcus Sibiricus Length = 377 | Back alignment and structure |
| >pdb|2V6C|A Chain A, Crystal Structure Of Erbb3 Binding Protein 1 (Ebp1) Length = 353 | Back alignment and structure |
| >pdb|3J2I|A Chain A, Structure Of Late Pre-60s Ribosomal Subunits With Nuclear Export Factor Arx1 Bound At The Peptide Exit Tunnel Length = 394 | Back alignment and structure |
| >pdb|2Q8K|A Chain A, The Crystal Structure Of Ebp1 Length = 401 | Back alignment and structure |
| >pdb|4EGE|A Chain A, Crystal Structure Of Dipeptidase Pepe From Mycobacterium Ulcerans Length = 378 | Back alignment and structure |
| >pdb|1CHM|B Chain B, Enzymatic Mechanism Of Creatine Amidinohydrolase As Deduced From Crystal Structures Length = 401 | Back alignment and structure |
| >pdb|1CHM|A Chain A, Enzymatic Mechanism Of Creatine Amidinohydrolase As Deduced From Crystal Structures Length = 401 | Back alignment and structure |
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >3pka_A Methionine aminopeptidase; hydrolase-hydrolase inhibitor complex; HET: Y02; 1.25A {Mycobacterium tuberculosis} PDB: 3pkb_A* 3pkc_A* 3pkd_A* 3pke_A* 3iu7_A* 3iu8_A* 3iu9_A* 1y1n_A 1yj3_A Length = 285 | Back alignment and structure |
|---|
Score = 383 bits (986), Expect = e-135
Identities = 100/218 (45%), Positives = 132/218 (60%), Gaps = 1/218 (0%)
Query: 84 KRPPLRRGRVSPRLPVPDHIPKPPYVSSTSLPDLSPEYQIHDSESIAKMRAACELAARVL 143
R L G +SP PVP+ I +P YV E + E I KMR A +AA L
Sbjct: 3 SRTALSPGVLSPTRPVPNWIARPEYVG-KPAAQEGSEPWVQTPEVIEKMRVAGRIAAGAL 61
Query: 144 DAAGKLVRPSVTTNEIDKAVHQMIIEAGAYPSPLGYGGFPKSVCTSVNECMCHGIPDSRQ 203
AGK V P VTT+E+D+ H+ +++ GAYPS LGY GFPKS CTS+NE +CHGIPDS
Sbjct: 62 AEAGKAVAPGVTTDELDRIAHEYLVDNGAYPSTLGYKGFPKSCCTSLNEVICHGIPDSTV 121
Query: 204 LQDGDIINIDVTVYLNGYHGDTSKTFLCGNVSDGLKRLVKVTEECLEKGIAVCKDGASFK 263
+ DGDI+NIDVT Y+ G HGDT+ TF G+V+D + LV T E + I K G +
Sbjct: 122 ITDGDIVNIDVTAYIGGVHGDTNATFPAGDVADEHRLLVDRTREATMRAINTVKPGRALS 181
Query: 264 KIGKRISEHAEKYGFGVVERFVGHGVGKVFHSEPIIYH 301
IG+ I +A ++G+ VV F GHG+G FH+ ++ H
Sbjct: 182 VIGRVIESYANRFGYNVVRDFTGHGIGTTFHNGLVVLH 219
|
| >3s6b_A Methionine aminopeptidase; malaria, proteolysis, "PITA bread" fold, structur genomics, structural genomics consortium, SGC, hydrolase; 1.95A {Plasmodium falciparum} Length = 368 | Back alignment and structure |
|---|
| >2b3h_A Methionine aminopeptidase 1; hydrolase, metalloprotease, pitab; HET: GOL; 1.10A {Homo sapiens} PDB: 2b3k_A 2b3l_A 2gz5_A* 2nq6_A* 2nq7_A* 2g6p_A* Length = 329 | Back alignment and structure |
|---|
| >3mx6_A Methionine aminopeptidase; seattle structural genomics center for infectious disease, S aminopeptidase, protease, epidermic typhus; 1.70A {Rickettsia prowazekii} PDB: 3mr1_A Length = 262 | Back alignment and structure |
|---|
| >2gg2_A Methionine aminopeptidase; PITA-bread fold, MAP inhibitor, antibacterial, hydrolase; HET: U12; 1.00A {Escherichia coli K12} SCOP: d.127.1.1 PDB: 2gg0_A* 2gg3_A* 2gg5_A* 2gg7_A* 2gg8_A* 2gg9_A* 2ggb_A* 2ggc_A 2q93_A* 2q95_A* 2q96_A* 1xnz_A* 1mat_A* 2bb7_A* 2evc_A* 2evm_A* 2evo_A* 3mat_A* 1yvm_A* 2mat_A ... Length = 263 | Back alignment and structure |
|---|
| >1qxy_A Methionyl aminopeptidase; PITA bread fold, hydrolase; HET: M2C; 1.04A {Staphylococcus aureus} SCOP: d.127.1.1 PDB: 1qxw_A* 1qxz_A* Length = 252 | Back alignment and structure |
|---|
| >3tb5_A Methionine aminopeptidase; hydrolase, metalloprotease, enter feacalis; HET: CIT; 2.30A {Enterococcus faecalis} Length = 264 | Back alignment and structure |
|---|
| >1o0x_A Methionine aminopeptidase; TM1478, structural genomics, JCSG, PSI, protein structure initiative, joint center for structural genomics; 1.90A {Thermotoga maritima} SCOP: d.127.1.1 Length = 262 | Back alignment and structure |
|---|
| >3tav_A Methionine aminopeptidase; ssgcid, seattle structural genomics center for infectious DI protease, hydrolase; 2.15A {Mycobacterium abscessus} Length = 286 | Back alignment and structure |
|---|
| >1xgs_A Methionine aminopeptidase; hyperthermophIle; 1.75A {Pyrococcus furiosus} SCOP: a.4.5.25 d.127.1.1 PDB: 1xgm_A 1xgn_A 1xgo_A 1wkm_A 2dfi_A Length = 295 | Back alignment and structure |
|---|
| >2q8k_A Proliferation-associated protein 2G4; EBP1, PA2G4, methionine aminopeptidase, PITA-bread, transcri; 1.60A {Homo sapiens} PDB: 2v6c_A Length = 401 | Back alignment and structure |
|---|
| >1b6a_A Methionine aminopeptidase; angiogenesis inhibitor; HET: TN4; 1.60A {Homo sapiens} SCOP: a.4.5.25 d.127.1.1 PDB: 1qzy_A* 1boa_A* 1kq0_A 1kq9_A 1bn5_A* 1b59_A* 1yw9_A* 1r5g_A* 1r5h_A* 1r58_A* 1yw8_A* 1yw7_A* 2adu_A* 2ea2_A* 2ea4_A* 2ga2_A* 2oaz_A* Length = 478 | Back alignment and structure |
|---|
| >1wy2_A XAA-Pro dipeptidase; structural genomics, prolidase, riken structural genomics/PR initiative, RSGI, hydrolase; 1.70A {Pyrococcus horikoshii} PDB: 1pv9_A Length = 351 | Back alignment and structure |
|---|
| >1wn1_A Dipeptidase; prolidase, cobalt(II), structural genomics, riken structural genomics/proteomics initiative, RSGI, hydrolase; 2.25A {Pyrococcus horikoshii} PDB: 2how_A Length = 356 | Back alignment and structure |
|---|
| >1kp0_A Creatine amidinohydrolase; alpha betal, 3-layer(ABA) sandwich; 2.70A {Actinobacillus} SCOP: c.55.2.1 d.127.1.1 Length = 402 | Back alignment and structure |
|---|
| >3q6d_A Proline dipeptidase; structural genomics, csgid, center for structural genomics O infectious diseases, aminopeptidase, viral protein; 1.97A {Bacillus anthracis} Length = 356 | Back alignment and structure |
|---|
| >2zsg_A Aminopeptidase P, putative; hydrolase; 1.65A {Thermotoga maritima} Length = 359 | Back alignment and structure |
|---|
| >1chm_A Creatine amidinohydrolase; creatinase; 1.90A {Pseudomonas putida} SCOP: c.55.2.1 d.127.1.1 Length = 401 | Back alignment and structure |
|---|
| >4ege_A Dipeptidase PEPE; structural genomics, seattle structural genomics center for infectious disease, ssgcid, hydrolase; 2.20A {Mycobacterium ulcerans} Length = 378 | Back alignment and structure |
|---|
| >3cb6_A FACT complex subunit SPT16; peptidase homology domain, histone binding module, histone H chaperone, PITA-bread fold; 1.84A {Schizosaccharomyces pombe} PDB: 3cb5_A Length = 444 | Back alignment and structure |
|---|
| >4b28_A Metallopeptidase, family M24, putative; lyase, imethylsulfonioproionate, acrylate, dimethylsulfide; 2.15A {Roseobacter denitrificans och 114} Length = 470 | Back alignment and structure |
|---|
| >3biq_A FACT complex subunit SPT16; PITA-bread, aminopeptidase, chromatin, replication, AC chromosomal protein, DNA damage, DNA repair; 1.73A {Saccharomyces cerevisiae} PDB: 3bip_A 3bit_A* Length = 467 | Back alignment and structure |
|---|
| >3ig4_A XAA-Pro aminopeptidase; csgid, hydrolase, struct genomics, center for structural genomics of infectious DISE; HET: SO4; 2.89A {Bacillus anthracis} Length = 427 | Back alignment and structure |
|---|
| >2v3z_A XAA-Pro aminopeptidase; 'PITA-bread' enzyme, proline- specific enzyme, aminopeptidas manganese enzyme, protease, manganese; HET: CSO; 1.56A {Escherichia coli} SCOP: c.55.2.1 d.127.1.1 PDB: 2bwy_A* 1wl9_A 1m35_A 1n51_A* 1w2m_A 1a16_A 1wbq_A 1wl6_A* 1w7v_A 1wlr_A* 2bh3_A* 2bha_A* 2bhb_A* 2bhc_A* 2bhd_A* 2bn7_A* 1jaw_A 2bwt_A* 2bwu_A* 2bww_A* ... Length = 440 | Back alignment and structure |
|---|
| >3rva_A Organophosphorus acid anhydrolase; PITA-bread fold, binuclea center, BI-functional, prolidase, nerve agents, XAA-Pro DIP hydrolase; 1.80A {Alteromonas macleodii} Length = 451 | Back alignment and structure |
|---|
| >2iw2_A XAA-Pro dipeptidase; metallocarboxypeptidase, disease mutation, XAA-Pro dipeptida dipeptidase, peptidase D, collagen degradation; 1.82A {Homo sapiens} PDB: 2okn_A Length = 494 | Back alignment and structure |
|---|
| >3l24_A XAA-Pro dipeptidase; PITA-bread, detoxification, hydrolase, manganese, metal-binding, metalloprotease, protease; 2.30A {Alteromonas SP} PDB: 3l7g_A* Length = 517 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 304 | |||
| 3s6b_A | 368 | Methionine aminopeptidase; malaria, proteolysis, " | 100.0 | |
| 4fuk_A | 337 | Methionine aminopeptidase; structural genomics con | 100.0 | |
| 2b3h_A | 329 | Methionine aminopeptidase 1; hydrolase, metallopro | 100.0 | |
| 3pka_A | 285 | Methionine aminopeptidase; hydrolase-hydrolase inh | 100.0 | |
| 3mx6_A | 262 | Methionine aminopeptidase; seattle structural geno | 100.0 | |
| 3tb5_A | 264 | Methionine aminopeptidase; hydrolase, metalloprote | 100.0 | |
| 3tav_A | 286 | Methionine aminopeptidase; ssgcid, seattle structu | 100.0 | |
| 1o0x_A | 262 | Methionine aminopeptidase; TM1478, structural geno | 100.0 | |
| 2gg2_A | 263 | Methionine aminopeptidase; PITA-bread fold, MAP in | 100.0 | |
| 1qxy_A | 252 | Methionyl aminopeptidase; PITA bread fold, hydrola | 100.0 | |
| 3q6d_A | 356 | Proline dipeptidase; structural genomics, csgid, c | 100.0 | |
| 2zsg_A | 359 | Aminopeptidase P, putative; hydrolase; 1.65A {Ther | 100.0 | |
| 1wy2_A | 351 | XAA-Pro dipeptidase; structural genomics, prolidas | 100.0 | |
| 2q8k_A | 401 | Proliferation-associated protein 2G4; EBP1, PA2G4, | 100.0 | |
| 1wn1_A | 356 | Dipeptidase; prolidase, cobalt(II), structural gen | 100.0 | |
| 4fkc_A | 377 | XAA-Pro aminopeptidase; PITA-bread structure, prol | 100.0 | |
| 4ege_A | 378 | Dipeptidase PEPE; structural genomics, seattle str | 100.0 | |
| 3ig4_A | 427 | XAA-Pro aminopeptidase; csgid, hydrolase, struct g | 100.0 | |
| 2v3z_A | 440 | XAA-Pro aminopeptidase; 'PITA-bread' enzyme, proli | 100.0 | |
| 3fm3_A | 358 | Methionine aminopeptidase 2; metap2, structural ge | 100.0 | |
| 1xgs_A | 295 | Methionine aminopeptidase; hyperthermophIle; 1.75A | 100.0 | |
| 3rva_A | 451 | Organophosphorus acid anhydrolase; PITA-bread fold | 100.0 | |
| 1kp0_A | 402 | Creatine amidinohydrolase; alpha betal, 3-layer(AB | 100.0 | |
| 2nw5_A | 360 | Methionine aminopeptidase 2; metap2, structural ge | 100.0 | |
| 3biq_A | 467 | FACT complex subunit SPT16; PITA-bread, aminopepti | 100.0 | |
| 3cb6_A | 444 | FACT complex subunit SPT16; peptidase homology dom | 100.0 | |
| 3l24_A | 517 | XAA-Pro dipeptidase; PITA-bread, detoxification, h | 100.0 | |
| 1chm_A | 401 | Creatine amidinohydrolase; creatinase; 1.90A {Pseu | 100.0 | |
| 2iw2_A | 494 | XAA-Pro dipeptidase; metallocarboxypeptidase, dise | 100.0 | |
| 4b28_A | 470 | Metallopeptidase, family M24, putative; lyase, ime | 100.0 | |
| 1b6a_A | 478 | Methionine aminopeptidase; angiogenesis inhibitor; | 100.0 | |
| 3ctz_A | 623 | XAA-Pro aminopeptidase 1; PITA-bread fold, alterna | 100.0 | |
| 4b6a_t | 614 | Probable metalloprotease ARX1; large ribosomal sub | 99.84 | |
| 1o0x_A | 262 | Methionine aminopeptidase; TM1478, structural geno | 96.35 | |
| 3q6d_A | 356 | Proline dipeptidase; structural genomics, csgid, c | 96.29 | |
| 3pka_A | 285 | Methionine aminopeptidase; hydrolase-hydrolase inh | 96.26 | |
| 3mx6_A | 262 | Methionine aminopeptidase; seattle structural geno | 96.16 | |
| 4ege_A | 378 | Dipeptidase PEPE; structural genomics, seattle str | 96.02 | |
| 3tav_A | 286 | Methionine aminopeptidase; ssgcid, seattle structu | 96.01 | |
| 1wy2_A | 351 | XAA-Pro dipeptidase; structural genomics, prolidas | 95.95 | |
| 1qxy_A | 252 | Methionyl aminopeptidase; PITA bread fold, hydrola | 95.88 | |
| 2gg2_A | 263 | Methionine aminopeptidase; PITA-bread fold, MAP in | 95.84 | |
| 2zsg_A | 359 | Aminopeptidase P, putative; hydrolase; 1.65A {Ther | 95.8 | |
| 1wn1_A | 356 | Dipeptidase; prolidase, cobalt(II), structural gen | 95.77 | |
| 3tb5_A | 264 | Methionine aminopeptidase; hydrolase, metalloprote | 95.7 | |
| 2b3h_A | 329 | Methionine aminopeptidase 1; hydrolase, metallopro | 95.47 | |
| 3cb6_A | 444 | FACT complex subunit SPT16; peptidase homology dom | 95.44 | |
| 3s6b_A | 368 | Methionine aminopeptidase; malaria, proteolysis, " | 95.28 | |
| 4fkc_A | 377 | XAA-Pro aminopeptidase; PITA-bread structure, prol | 95.1 | |
| 3biq_A | 467 | FACT complex subunit SPT16; PITA-bread, aminopepti | 95.09 | |
| 1kp0_A | 402 | Creatine amidinohydrolase; alpha betal, 3-layer(AB | 94.85 | |
| 2v3z_A | 440 | XAA-Pro aminopeptidase; 'PITA-bread' enzyme, proli | 94.65 | |
| 3ig4_A | 427 | XAA-Pro aminopeptidase; csgid, hydrolase, struct g | 94.64 | |
| 1xgs_A | 295 | Methionine aminopeptidase; hyperthermophIle; 1.75A | 94.28 | |
| 1chm_A | 401 | Creatine amidinohydrolase; creatinase; 1.90A {Pseu | 94.0 | |
| 2nw5_A | 360 | Methionine aminopeptidase 2; metap2, structural ge | 93.7 | |
| 2q8k_A | 401 | Proliferation-associated protein 2G4; EBP1, PA2G4, | 92.74 | |
| 4b28_A | 470 | Metallopeptidase, family M24, putative; lyase, ime | 90.87 | |
| 4fuk_A | 337 | Methionine aminopeptidase; structural genomics con | 90.81 | |
| 3rva_A | 451 | Organophosphorus acid anhydrolase; PITA-bread fold | 90.55 | |
| 3fm3_A | 358 | Methionine aminopeptidase 2; metap2, structural ge | 89.9 | |
| 3ctz_A | 623 | XAA-Pro aminopeptidase 1; PITA-bread fold, alterna | 89.18 | |
| 1b6a_A | 478 | Methionine aminopeptidase; angiogenesis inhibitor; | 88.22 | |
| 3l24_A | 517 | XAA-Pro dipeptidase; PITA-bread, detoxification, h | 88.01 | |
| 2iw2_A | 494 | XAA-Pro dipeptidase; metallocarboxypeptidase, dise | 87.86 |
| >3s6b_A Methionine aminopeptidase; malaria, proteolysis, "PITA bread" fold, structur genomics, structural genomics consortium, SGC, hydrolase; 1.95A {Plasmodium falciparum} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.2e-53 Score=400.86 Aligned_cols=229 Identities=43% Similarity=0.711 Sum_probs=217.6
Q ss_pred hhccCCCCCCCCCCccccCCCCccCCCCCCCCCcccCCCCCC-----CCcccccCCHHHHHHHHHHHHHHHHHHHHHHHh
Q 021989 75 ELQTTTKFRKRPPLRRGRVSPRLPVPDHIPKPPYVSSTSLPD-----LSPEYQIHDSESIAKMRAACELAARVLDAAGKL 149 (304)
Q Consensus 75 ~~~~~~~~~~~~~l~~g~~s~~~~vp~~i~~p~y~~~~~~~~-----l~~~R~vKs~~EIe~mR~A~~ia~~~l~~~~~~ 149 (304)
.+..++.|.|+++||||.+||.+.||++|++|+|+..+.+.. -...+.|||++||+.||+|+++++++++.+.+.
T Consensus 50 ~~~~~~~~~~~~~~~~~~~~~~~~vp~~i~~p~y~~~~~~~~~~~~~~~~~~~IKs~~EIe~mR~A~~ia~~al~~~~~~ 129 (368)
T 3s6b_A 50 HLKNFVNFKFTGDVRPWPLSKINHVPSHIERPDYAISSIPESELIYKRKSDIYVNNEEEIQRIREACILGRKTLDYAHTL 129 (368)
T ss_dssp TGGGGTTCCCSSSCCCCCCCCCCCCCTTSCCCTTTTTSCCHHHHSCCCTTCCCCCCHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred ccCCCCCCCcCCcccccccCCCCCCCcCCCCCccccCCCChhhhhccccCCceeCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345789999999999999999999999999999998765421 134689999999999999999999999999999
Q ss_pred cCCCCcHHHHHHHHHHHHHHcCCCCCCCCCCCCCCeeeecCCCCcccCCCCCCCCCCCCEEEEEeecccCcEEeceeeeE
Q 021989 150 VRPSVTTNEIDKAVHQMIIEAGAYPSPLGYGGFPKSVCTSVNECMCHGIPDSRQLQDGDIINIDVTVYLNGYHGDTSKTF 229 (304)
Q Consensus 150 i~pGvTe~eI~~~~~~~~~~~G~~ps~l~y~gfp~~v~sg~n~~~~H~~p~~r~l~~GDiv~iD~~~~~~GY~~D~sRT~ 229 (304)
++||+||.||++.+++.+.++|++|++++|.+||++||+|.|+++||++|++++|++||+|+||+|+.++||++|++|||
T Consensus 130 ikpGvTE~El~~~~~~~~~~~Ga~ps~l~y~~Fp~iv~sg~N~~i~H~~p~~r~L~~GDiV~iD~G~~~~GY~sDitRT~ 209 (368)
T 3s6b_A 130 VSPGVTTDEIDRKVHEFIIKNNAYPSTLNYYKFPKSCCTSVNEIVCHGIPDYRPLKSGDIINIDISVFYKGVHSDLNETY 209 (368)
T ss_dssp CCTTCBHHHHHHHHHHHHHHTTCEETTTTGGGCCSSEEEEETTEEECCCCCSCBCCTTCEEEEEEEEEETTEEEEEEEEE
T ss_pred ccCCCCHHHHHHHHHHHHHHcCCccccccccCCCCeEEEcCccccccCCCCCccccCCCEEEEEEeEEECcEEEEEEEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred Ecc---CCCHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHHHcCCCccCcceeeecCCCCccCCCcCCCC
Q 021989 230 LCG---NVSDGLKRLVKVTEECLEKGIAVCKDGASFKKIGKRISEHAEKYGFGVVERFVGHGVGKVFHSEPIIYHNR 303 (304)
Q Consensus 230 ~vG---~~~~e~~~l~~~~~ea~~~~i~~~kPG~~~~dI~~~i~~~~~~~G~~~~~~~~GHgIG~~~he~P~i~~~~ 303 (304)
++| +++++++++|++++++++++++++|||++++||+++++++++++||..+.+++|||||+++||.|.|+++.
T Consensus 210 ~vGg~~~~s~e~~~ly~~v~ea~~aai~~ikPG~~~~dI~~aa~~~i~~~G~~~~~~~~GHGIG~~vHE~P~i~~~~ 286 (368)
T 3s6b_A 210 FVGDINDVPKEGKELVETCYFSLMEAIKKCKPGMFYKNIGTLIDAYVSKKNFSVVRSYSGHGVGKLFHSNPTVPHFK 286 (368)
T ss_dssp ECSCGGGSCHHHHHHHHHHHHHHHHHHHHCCTTCBTHHHHHHHHHHHHTTTCEECCSCCEEECSSSSSEEEEECSSS
T ss_pred EECCCCCCCHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHHHcCCCcccceeeCCCCccccCCCcccccc
Confidence 999 89999999999999999999999999999999999999999999999888999999999999999999863
|
| >4fuk_A Methionine aminopeptidase; structural genomics consortium, SGC, hydrolase; 1.75A {Trypanosoma brucei brucei} | Back alignment and structure |
|---|
| >2b3h_A Methionine aminopeptidase 1; hydrolase, metalloprotease, pitab; HET: GOL; 1.10A {Homo sapiens} PDB: 2b3k_A 2b3l_A 2gz5_A* 2nq6_A* 2nq7_A* 2g6p_A* | Back alignment and structure |
|---|
| >3pka_A Methionine aminopeptidase; hydrolase-hydrolase inhibitor complex; HET: Y02; 1.25A {Mycobacterium tuberculosis} PDB: 3pkb_A* 3pkc_A* 3pkd_A* 3pke_A* 3iu7_A* 3iu8_A* 3iu9_A* 1y1n_A 1yj3_A 3ror_A | Back alignment and structure |
|---|
| >3mx6_A Methionine aminopeptidase; seattle structural genomics center for infectious disease, S aminopeptidase, protease, epidermic typhus; 1.70A {Rickettsia prowazekii} PDB: 3mr1_A | Back alignment and structure |
|---|
| >3tb5_A Methionine aminopeptidase; hydrolase, metalloprotease, enter feacalis; HET: CIT; 2.30A {Enterococcus faecalis} | Back alignment and structure |
|---|
| >3tav_A Methionine aminopeptidase; ssgcid, seattle structural genomics center for infectious DI protease, hydrolase; 2.15A {Mycobacterium abscessus} | Back alignment and structure |
|---|
| >1o0x_A Methionine aminopeptidase; TM1478, structural genomics, JCSG, PSI, protein structure initiative, joint center for structural genomics; 1.90A {Thermotoga maritima} SCOP: d.127.1.1 | Back alignment and structure |
|---|
| >2gg2_A Methionine aminopeptidase; PITA-bread fold, MAP inhibitor, antibacterial, hydrolase; HET: U12; 1.00A {Escherichia coli K12} SCOP: d.127.1.1 PDB: 2gg0_A* 2gg3_A* 2gg5_A* 2gg7_A* 2gg8_A* 2gg9_A* 2ggb_A* 2ggc_A 2q93_A* 2q95_A* 2q96_A* 1xnz_A* 1mat_A* 2bb7_A* 2evc_A* 2evm_A* 2evo_A* 3mat_A* 1yvm_A* 2mat_A ... | Back alignment and structure |
|---|
| >1qxy_A Methionyl aminopeptidase; PITA bread fold, hydrolase; HET: M2C; 1.04A {Staphylococcus aureus} SCOP: d.127.1.1 PDB: 1qxw_A* 1qxz_A* | Back alignment and structure |
|---|
| >3q6d_A Proline dipeptidase; structural genomics, csgid, center for structural genomics O infectious diseases, aminopeptidase, viral protein; 1.97A {Bacillus anthracis} | Back alignment and structure |
|---|
| >2zsg_A Aminopeptidase P, putative; hydrolase; 1.65A {Thermotoga maritima} | Back alignment and structure |
|---|
| >1wy2_A XAA-Pro dipeptidase; structural genomics, prolidase, riken structural genomics/PR initiative, RSGI, hydrolase; 1.70A {Pyrococcus horikoshii} PDB: 1pv9_A | Back alignment and structure |
|---|
| >2q8k_A Proliferation-associated protein 2G4; EBP1, PA2G4, methionine aminopeptidase, PITA-bread, transcri; 1.60A {Homo sapiens} PDB: 2v6c_A | Back alignment and structure |
|---|
| >1wn1_A Dipeptidase; prolidase, cobalt(II), structural genomics, riken structural genomics/proteomics initiative, RSGI, hydrolase; 2.25A {Pyrococcus horikoshii} PDB: 2how_A | Back alignment and structure |
|---|
| >4fkc_A XAA-Pro aminopeptidase; PITA-bread structure, prolidase, hydrolase; 2.60A {Thermococcus sibiricus} | Back alignment and structure |
|---|
| >4ege_A Dipeptidase PEPE; structural genomics, seattle structural genomics center for infectious disease, ssgcid, hydrolase; 2.20A {Mycobacterium ulcerans} | Back alignment and structure |
|---|
| >3ig4_A XAA-Pro aminopeptidase; csgid, hydrolase, struct genomics, center for structural genomics of infectious DISE; HET: SO4; 2.89A {Bacillus anthracis} | Back alignment and structure |
|---|
| >2v3z_A XAA-Pro aminopeptidase; 'PITA-bread' enzyme, proline- specific enzyme, aminopeptidas manganese enzyme, protease, manganese; HET: CSO; 1.56A {Escherichia coli} SCOP: c.55.2.1 d.127.1.1 PDB: 2bwy_A* 1wl9_A 1m35_A 1n51_A* 1w2m_A 1a16_A 1wbq_A 1wl6_A* 1w7v_A 1wlr_A* 2bh3_A* 2bha_A* 2bhb_A* 2bhc_A* 2bhd_A* 2bn7_A* 1jaw_A 2bwt_A* 2bwu_A* 2bww_A* ... | Back alignment and structure |
|---|
| >3fm3_A Methionine aminopeptidase 2; metap2, structural genomics, PSI-2, protein structure initiative; 2.18A {Encephalitozoon cuniculi} PDB: 3fmq_A* 3fmr_A* | Back alignment and structure |
|---|
| >1xgs_A Methionine aminopeptidase; hyperthermophIle; 1.75A {Pyrococcus furiosus} SCOP: a.4.5.25 d.127.1.1 PDB: 1xgm_A 1xgn_A 1xgo_A 1wkm_A 2dfi_A | Back alignment and structure |
|---|
| >3rva_A Organophosphorus acid anhydrolase; PITA-bread fold, binuclea center, BI-functional, prolidase, nerve agents, XAA-Pro DIP hydrolase; 1.80A {Alteromonas macleodii} | Back alignment and structure |
|---|
| >1kp0_A Creatine amidinohydrolase; alpha betal, 3-layer(ABA) sandwich; 2.70A {Actinobacillus} SCOP: c.55.2.1 d.127.1.1 | Back alignment and structure |
|---|
| >3biq_A FACT complex subunit SPT16; PITA-bread, aminopeptidase, chromatin, replication, AC chromosomal protein, DNA damage, DNA repair; 1.73A {Saccharomyces cerevisiae} PDB: 3bip_A 3bit_A* | Back alignment and structure |
|---|
| >3cb6_A FACT complex subunit SPT16; peptidase homology domain, histone binding module, histone H chaperone, PITA-bread fold; 1.84A {Schizosaccharomyces pombe} PDB: 3cb5_A | Back alignment and structure |
|---|
| >3l24_A XAA-Pro dipeptidase; PITA-bread, detoxification, hydrolase, manganese, metal-binding, metalloprotease, protease; 2.30A {Alteromonas SP} PDB: 3l7g_A* | Back alignment and structure |
|---|
| >1chm_A Creatine amidinohydrolase; creatinase; 1.90A {Pseudomonas putida} SCOP: c.55.2.1 d.127.1.1 | Back alignment and structure |
|---|
| >2iw2_A XAA-Pro dipeptidase; metallocarboxypeptidase, disease mutation, XAA-Pro dipeptida dipeptidase, peptidase D, collagen degradation; 1.82A {Homo sapiens} PDB: 2okn_A | Back alignment and structure |
|---|
| >4b28_A Metallopeptidase, family M24, putative; lyase, imethylsulfonioproionate, acrylate, dimethylsulfide; 2.15A {Roseobacter denitrificans och 114} | Back alignment and structure |
|---|
| >1b6a_A Methionine aminopeptidase; angiogenesis inhibitor; HET: TN4; 1.60A {Homo sapiens} SCOP: a.4.5.25 d.127.1.1 PDB: 1qzy_A* 1boa_A* 1kq0_A 1kq9_A 1bn5_A* 1b59_A* 1yw9_A* 1r5g_A* 1r5h_A* 1r58_A* 1yw8_A* 1yw7_A* 2adu_A* 2ea2_A* 2ea4_A* 2ga2_A* 2oaz_A* | Back alignment and structure |
|---|
| >3ctz_A XAA-Pro aminopeptidase 1; PITA-bread fold, alternative splicing, cytoplasm, hydrolase, manganese, metal-binding, metalloprotease, protease; HET: P6G; 1.60A {Homo sapiens} | Back alignment and structure |
|---|
| >4b6a_t Probable metalloprotease ARX1; large ribosomal subunit, ribosome biogenesis, ribosome matur factor, ribosome; 8.10A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
| >1o0x_A Methionine aminopeptidase; TM1478, structural genomics, JCSG, PSI, protein structure initiative, joint center for structural genomics; 1.90A {Thermotoga maritima} SCOP: d.127.1.1 | Back alignment and structure |
|---|
| >3q6d_A Proline dipeptidase; structural genomics, csgid, center for structural genomics O infectious diseases, aminopeptidase, viral protein; 1.97A {Bacillus anthracis} | Back alignment and structure |
|---|
| >3pka_A Methionine aminopeptidase; hydrolase-hydrolase inhibitor complex; HET: Y02; 1.25A {Mycobacterium tuberculosis} PDB: 3pkb_A* 3pkc_A* 3pkd_A* 3pke_A* 3iu7_A* 3iu8_A* 3iu9_A* 1y1n_A 1yj3_A 3ror_A | Back alignment and structure |
|---|
| >3mx6_A Methionine aminopeptidase; seattle structural genomics center for infectious disease, S aminopeptidase, protease, epidermic typhus; 1.70A {Rickettsia prowazekii} PDB: 3mr1_A | Back alignment and structure |
|---|
| >4ege_A Dipeptidase PEPE; structural genomics, seattle structural genomics center for infectious disease, ssgcid, hydrolase; 2.20A {Mycobacterium ulcerans} | Back alignment and structure |
|---|
| >3tav_A Methionine aminopeptidase; ssgcid, seattle structural genomics center for infectious DI protease, hydrolase; 2.15A {Mycobacterium abscessus} | Back alignment and structure |
|---|
| >1wy2_A XAA-Pro dipeptidase; structural genomics, prolidase, riken structural genomics/PR initiative, RSGI, hydrolase; 1.70A {Pyrococcus horikoshii} PDB: 1pv9_A | Back alignment and structure |
|---|
| >1qxy_A Methionyl aminopeptidase; PITA bread fold, hydrolase; HET: M2C; 1.04A {Staphylococcus aureus} SCOP: d.127.1.1 PDB: 1qxw_A* 1qxz_A* | Back alignment and structure |
|---|
| >2gg2_A Methionine aminopeptidase; PITA-bread fold, MAP inhibitor, antibacterial, hydrolase; HET: U12; 1.00A {Escherichia coli K12} SCOP: d.127.1.1 PDB: 2gg0_A* 2gg3_A* 2gg5_A* 2gg7_A* 2gg8_A* 2gg9_A* 2ggb_A* 2ggc_A 2q93_A* 2q95_A* 2q96_A* 1xnz_A* 1mat_A* 2bb7_A* 2evc_A* 2evm_A* 2evo_A* 3mat_A* 1yvm_A* 2mat_A ... | Back alignment and structure |
|---|
| >2zsg_A Aminopeptidase P, putative; hydrolase; 1.65A {Thermotoga maritima} | Back alignment and structure |
|---|
| >1wn1_A Dipeptidase; prolidase, cobalt(II), structural genomics, riken structural genomics/proteomics initiative, RSGI, hydrolase; 2.25A {Pyrococcus horikoshii} PDB: 2how_A | Back alignment and structure |
|---|
| >3tb5_A Methionine aminopeptidase; hydrolase, metalloprotease, enter feacalis; HET: CIT; 2.30A {Enterococcus faecalis} | Back alignment and structure |
|---|
| >2b3h_A Methionine aminopeptidase 1; hydrolase, metalloprotease, pitab; HET: GOL; 1.10A {Homo sapiens} PDB: 2b3k_A 2b3l_A 2gz5_A* 2nq6_A* 2nq7_A* 2g6p_A* | Back alignment and structure |
|---|
| >3cb6_A FACT complex subunit SPT16; peptidase homology domain, histone binding module, histone H chaperone, PITA-bread fold; 1.84A {Schizosaccharomyces pombe} PDB: 3cb5_A | Back alignment and structure |
|---|
| >3s6b_A Methionine aminopeptidase; malaria, proteolysis, "PITA bread" fold, structur genomics, structural genomics consortium, SGC, hydrolase; 1.95A {Plasmodium falciparum} | Back alignment and structure |
|---|
| >4fkc_A XAA-Pro aminopeptidase; PITA-bread structure, prolidase, hydrolase; 2.60A {Thermococcus sibiricus} | Back alignment and structure |
|---|
| >3biq_A FACT complex subunit SPT16; PITA-bread, aminopeptidase, chromatin, replication, AC chromosomal protein, DNA damage, DNA repair; 1.73A {Saccharomyces cerevisiae} PDB: 3bip_A 3bit_A* | Back alignment and structure |
|---|
| >1kp0_A Creatine amidinohydrolase; alpha betal, 3-layer(ABA) sandwich; 2.70A {Actinobacillus} SCOP: c.55.2.1 d.127.1.1 | Back alignment and structure |
|---|
| >2v3z_A XAA-Pro aminopeptidase; 'PITA-bread' enzyme, proline- specific enzyme, aminopeptidas manganese enzyme, protease, manganese; HET: CSO; 1.56A {Escherichia coli} SCOP: c.55.2.1 d.127.1.1 PDB: 2bwy_A* 1wl9_A 1m35_A 1n51_A* 1w2m_A 1a16_A 1wbq_A 1wl6_A* 1w7v_A 1wlr_A* 2bh3_A* 2bha_A* 2bhb_A* 2bhc_A* 2bhd_A* 2bn7_A* 1jaw_A 2bwt_A* 2bwu_A* 2bww_A* ... | Back alignment and structure |
|---|
| >3ig4_A XAA-Pro aminopeptidase; csgid, hydrolase, struct genomics, center for structural genomics of infectious DISE; HET: SO4; 2.89A {Bacillus anthracis} | Back alignment and structure |
|---|
| >1xgs_A Methionine aminopeptidase; hyperthermophIle; 1.75A {Pyrococcus furiosus} SCOP: a.4.5.25 d.127.1.1 PDB: 1xgm_A 1xgn_A 1xgo_A 1wkm_A 2dfi_A | Back alignment and structure |
|---|
| >1chm_A Creatine amidinohydrolase; creatinase; 1.90A {Pseudomonas putida} SCOP: c.55.2.1 d.127.1.1 | Back alignment and structure |
|---|
| >2q8k_A Proliferation-associated protein 2G4; EBP1, PA2G4, methionine aminopeptidase, PITA-bread, transcri; 1.60A {Homo sapiens} PDB: 2v6c_A | Back alignment and structure |
|---|
| >4b28_A Metallopeptidase, family M24, putative; lyase, imethylsulfonioproionate, acrylate, dimethylsulfide; 2.15A {Roseobacter denitrificans och 114} | Back alignment and structure |
|---|
| >4fuk_A Methionine aminopeptidase; structural genomics consortium, SGC, hydrolase; 1.75A {Trypanosoma brucei brucei} | Back alignment and structure |
|---|
| >3rva_A Organophosphorus acid anhydrolase; PITA-bread fold, binuclea center, BI-functional, prolidase, nerve agents, XAA-Pro DIP hydrolase; 1.80A {Alteromonas macleodii} | Back alignment and structure |
|---|
| >3fm3_A Methionine aminopeptidase 2; metap2, structural genomics, PSI-2, protein structure initiative; 2.18A {Encephalitozoon cuniculi} PDB: 3fmq_A* 3fmr_A* | Back alignment and structure |
|---|
| >3ctz_A XAA-Pro aminopeptidase 1; PITA-bread fold, alternative splicing, cytoplasm, hydrolase, manganese, metal-binding, metalloprotease, protease; HET: P6G; 1.60A {Homo sapiens} | Back alignment and structure |
|---|
| >1b6a_A Methionine aminopeptidase; angiogenesis inhibitor; HET: TN4; 1.60A {Homo sapiens} SCOP: a.4.5.25 d.127.1.1 PDB: 1qzy_A* 1boa_A* 1kq0_A 1kq9_A 1bn5_A* 1b59_A* 1yw9_A* 1r5g_A* 1r5h_A* 1r58_A* 1yw8_A* 1yw7_A* 2adu_A* 2ea2_A* 2ea4_A* 2ga2_A* 2oaz_A* | Back alignment and structure |
|---|
| >3l24_A XAA-Pro dipeptidase; PITA-bread, detoxification, hydrolase, manganese, metal-binding, metalloprotease, protease; 2.30A {Alteromonas SP} PDB: 3l7g_A* | Back alignment and structure |
|---|
| >2iw2_A XAA-Pro dipeptidase; metallocarboxypeptidase, disease mutation, XAA-Pro dipeptida dipeptidase, peptidase D, collagen degradation; 1.82A {Homo sapiens} PDB: 2okn_A | Back alignment and structure |
|---|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 304 | ||||
| d2gg2a1 | 262 | d.127.1.1 (A:3-264) Methionine aminopeptidase {Esc | 6e-43 | |
| d1o0xa_ | 249 | d.127.1.1 (A:) Methionine aminopeptidase {Thermoto | 1e-30 | |
| d1b6aa2 | 295 | d.127.1.1 (A:110-374,A:449-478) Methionine aminope | 4e-25 | |
| d1pv9a2 | 221 | d.127.1.1 (A:125-345) Aminopeptidase P, C-terminal | 6e-21 | |
| d2v3za2 | 264 | d.127.1.1 (A:177-440) Aminopeptidase P, C-terminal | 1e-20 | |
| d1xgsa2 | 218 | d.127.1.1 (A:1-194,A:272-295) Methionine aminopept | 9e-20 | |
| d1qxya_ | 249 | d.127.1.1 (A:) Methionine aminopeptidase {Staphylo | 1e-18 | |
| d1chma2 | 246 | d.127.1.1 (A:157-402) Creatinase, catalytic (C-ter | 8e-18 |
| >d2gg2a1 d.127.1.1 (A:3-264) Methionine aminopeptidase {Escherichia coli [TaxId: 562]} Length = 262 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Creatinase/aminopeptidase superfamily: Creatinase/aminopeptidase family: Creatinase/aminopeptidase domain: Methionine aminopeptidase species: Escherichia coli [TaxId: 562]
Score = 146 bits (368), Expect = 6e-43
Identities = 83/185 (44%), Positives = 116/185 (62%), Gaps = 2/185 (1%)
Query: 122 QIHDSESIAKMRAACELAARVLDAAGKLVRPSVTTNEIDKAVHQMII-EAGAYPSPLGYG 180
I E I KMR A LAA VL+ V+P V+T E+D+ + I+ E A + LGY
Sbjct: 2 SIKTPEDIEKMRVAGRLAAEVLEMIEPYVKPGVSTGELDRICNDYIVNEQHAVSACLGYH 61
Query: 181 GFPKSVCTSVNECMCHGIP-DSRQLQDGDIINIDVTVYLNGYHGDTSKTFLCGNVSDGLK 239
G+PKSVC S+NE +CHGIP D++ L+DGDI+NIDVTV +G+HGDTSK F+ G + +
Sbjct: 62 GYPKSVCISINEVVCHGIPDDAKLLKDGDIVNIDVTVIKDGFHGDTSKMFIVGKPTIMGE 121
Query: 240 RLVKVTEECLEKGIAVCKDGASFKKIGKRISEHAEKYGFGVVERFVGHGVGKVFHSEPII 299
RL ++T+E L + + K G + ++IG I + E GF VV + GHG+G+ FH EP +
Sbjct: 122 RLCRITQESLYLALRMVKPGINLREIGAAIQKFVEAEGFSVVREYCGHGIGRGFHEEPQV 181
Query: 300 YHNRK 304
H
Sbjct: 182 LHYDS 186
|
| >d1o0xa_ d.127.1.1 (A:) Methionine aminopeptidase {Thermotoga maritima [TaxId: 2336]} Length = 249 | Back information, alignment and structure |
|---|
| >d1b6aa2 d.127.1.1 (A:110-374,A:449-478) Methionine aminopeptidase {Human (Homo sapiens) [TaxId: 9606]} Length = 295 | Back information, alignment and structure |
|---|
| >d1pv9a2 d.127.1.1 (A:125-345) Aminopeptidase P, C-terminal domain {Archaeon Pyrococcus furiosus [TaxId: 2261]} Length = 221 | Back information, alignment and structure |
|---|
| >d2v3za2 d.127.1.1 (A:177-440) Aminopeptidase P, C-terminal domain {Escherichia coli [TaxId: 562]} Length = 264 | Back information, alignment and structure |
|---|
| >d1xgsa2 d.127.1.1 (A:1-194,A:272-295) Methionine aminopeptidase {Archaeon Pyrococcus furiosus [TaxId: 2261]} Length = 218 | Back information, alignment and structure |
|---|
| >d1qxya_ d.127.1.1 (A:) Methionine aminopeptidase {Staphylococcus aureus [TaxId: 1280]} Length = 249 | Back information, alignment and structure |
|---|
| >d1chma2 d.127.1.1 (A:157-402) Creatinase, catalytic (C-terminal) domain {Pseudomonas putida [TaxId: 303]} Length = 246 | Back information, alignment and structure |
|---|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 304 | |||
| d1o0xa_ | 249 | Methionine aminopeptidase {Thermotoga maritima [Ta | 100.0 | |
| d1pv9a2 | 221 | Aminopeptidase P, C-terminal domain {Archaeon Pyro | 100.0 | |
| d2gg2a1 | 262 | Methionine aminopeptidase {Escherichia coli [TaxId | 100.0 | |
| d1qxya_ | 249 | Methionine aminopeptidase {Staphylococcus aureus [ | 100.0 | |
| d1chma2 | 246 | Creatinase, catalytic (C-terminal) domain {Pseudom | 100.0 | |
| d1xgsa2 | 218 | Methionine aminopeptidase {Archaeon Pyrococcus fur | 100.0 | |
| d2v3za2 | 264 | Aminopeptidase P, C-terminal domain {Escherichia c | 99.98 | |
| d1b6aa2 | 295 | Methionine aminopeptidase {Human (Homo sapiens) [T | 99.97 | |
| d1pv9a2 | 221 | Aminopeptidase P, C-terminal domain {Archaeon Pyro | 96.86 | |
| d1chma2 | 246 | Creatinase, catalytic (C-terminal) domain {Pseudom | 96.26 | |
| d2gg2a1 | 262 | Methionine aminopeptidase {Escherichia coli [TaxId | 95.98 | |
| d1xgsa2 | 218 | Methionine aminopeptidase {Archaeon Pyrococcus fur | 95.7 | |
| d1o0xa_ | 249 | Methionine aminopeptidase {Thermotoga maritima [Ta | 94.66 | |
| d1qxya_ | 249 | Methionine aminopeptidase {Staphylococcus aureus [ | 94.53 | |
| d2v3za2 | 264 | Aminopeptidase P, C-terminal domain {Escherichia c | 92.23 | |
| d1b6aa2 | 295 | Methionine aminopeptidase {Human (Homo sapiens) [T | 84.55 |
| >d1o0xa_ d.127.1.1 (A:) Methionine aminopeptidase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Creatinase/aminopeptidase superfamily: Creatinase/aminopeptidase family: Creatinase/aminopeptidase domain: Methionine aminopeptidase species: Thermotoga maritima [TaxId: 2336]
Probab=100.00 E-value=1.3e-38 Score=283.93 Aligned_cols=182 Identities=34% Similarity=0.604 Sum_probs=173.2
Q ss_pred ccccCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHcCCCCCCCCCCCCCCeeeecCCCCcccCCC
Q 021989 120 EYQIHDSESIAKMRAACELAARVLDAAGKLVRPSVTTNEIDKAVHQMIIEAGAYPSPLGYGGFPKSVCTSVNECMCHGIP 199 (304)
Q Consensus 120 ~R~vKs~~EIe~mR~A~~ia~~~l~~~~~~i~pGvTe~eI~~~~~~~~~~~G~~ps~l~y~gfp~~v~sg~n~~~~H~~p 199 (304)
+|.|||++||+.||+|+++++++++++.+.++||+||.||++.+++.+.+.|+.+.+.++.+++.+++.+.++..+|+.+
T Consensus 1 m~~IKs~~Ei~~mr~A~~ia~~~~~~~~~~i~~G~te~ev~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (249)
T d1o0xa_ 1 MIRIKTPSEIEKMKKAGKAVAVALREVRKVIVPGKTAWDVETLVLEIFKKLRVKPAFKGYGGYKYATCVSVNEEVVHGLP 80 (249)
T ss_dssp CCCCCCHHHHHHHHHHHHHHHHHHHHGGGGCSTTCBHHHHHHHHHHHHHHHTCEESSTTGGGCCCSEEEEETTBCSCCCC
T ss_pred CCccCCHHHHHHHHHHHHHHHHHHHHHHHHCcCCCCHHHHHHHHHHHHHHhhhhhhccccccccccccccCcccccceee
Confidence 58899999999999999999999999999999999999999999999999999988888888888899999998888765
Q ss_pred -CCCCCCCCCEEEEEeecccCcEEeceeeeEEccCCCHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHHHcCC
Q 021989 200 -DSRQLQDGDIINIDVTVYLNGYHGDTSKTFLCGNVSDGLKRLVKVTEECLEKGIAVCKDGASFKKIGKRISEHAEKYGF 278 (304)
Q Consensus 200 -~~r~l~~GDiv~iD~~~~~~GY~~D~sRT~~vG~~~~e~~~l~~~~~ea~~~~i~~~kPG~~~~dI~~~i~~~~~~~G~ 278 (304)
+++++++||+|.+|+++.++||++|++|||++|+++++++++++.++++++++++.+|||++++||++++++++++.||
T Consensus 81 ~~~~~~~~gd~v~id~g~~~~gy~~D~~RT~~~G~~s~~~~~~~~~~~~a~~a~i~~~kpG~~~~dv~~~~~~~~~~~g~ 160 (249)
T d1o0xa_ 81 LKEKVFKEGDIVSVDVGAVYQGLYGDAAVTYIVGETDERGKELVRVTREVLEKAIKMIKPGIRLGDVSHCIQETVESVGF 160 (249)
T ss_dssp CTTCBCCTTCEEEEEEEEEETTEEEEEEEEEESSCCCHHHHHHHHHHHHHHHHHHHTCCTTSBHHHHHHHHHHHHHHTTC
T ss_pred ccccccccccceeeecceeecceecccccceeecCcChhhHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHhcCC
Confidence 6789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccCcceeeecCCCCccCCCcCC
Q 021989 279 GVVERFVGHGVGKVFHSEPIIYH 301 (304)
Q Consensus 279 ~~~~~~~GHgIG~~~he~P~i~~ 301 (304)
..+++++|||||+.+||.|.+..
T Consensus 161 ~~~~~~~GHgiG~~~~~~p~~~~ 183 (249)
T d1o0xa_ 161 NVIRDYVGHGVGRELHEDPQIPN 183 (249)
T ss_dssp EECCSSCEEECSSSSSEEEEECS
T ss_pred eeecCCcccccccCCCcCCccce
Confidence 88889999999999999988754
|
| >d1pv9a2 d.127.1.1 (A:125-345) Aminopeptidase P, C-terminal domain {Archaeon Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
| >d2gg2a1 d.127.1.1 (A:3-264) Methionine aminopeptidase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d1qxya_ d.127.1.1 (A:) Methionine aminopeptidase {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
|---|
| >d1chma2 d.127.1.1 (A:157-402) Creatinase, catalytic (C-terminal) domain {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
| >d1xgsa2 d.127.1.1 (A:1-194,A:272-295) Methionine aminopeptidase {Archaeon Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
| >d2v3za2 d.127.1.1 (A:177-440) Aminopeptidase P, C-terminal domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d1b6aa2 d.127.1.1 (A:110-374,A:449-478) Methionine aminopeptidase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1pv9a2 d.127.1.1 (A:125-345) Aminopeptidase P, C-terminal domain {Archaeon Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
| >d1chma2 d.127.1.1 (A:157-402) Creatinase, catalytic (C-terminal) domain {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
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| >d2gg2a1 d.127.1.1 (A:3-264) Methionine aminopeptidase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
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| >d1xgsa2 d.127.1.1 (A:1-194,A:272-295) Methionine aminopeptidase {Archaeon Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
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| >d1o0xa_ d.127.1.1 (A:) Methionine aminopeptidase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
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| >d1qxya_ d.127.1.1 (A:) Methionine aminopeptidase {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
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| >d2v3za2 d.127.1.1 (A:177-440) Aminopeptidase P, C-terminal domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
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| >d1b6aa2 d.127.1.1 (A:110-374,A:449-478) Methionine aminopeptidase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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