Citrus Sinensis ID: 022010
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 304 | ||||||
| 118488459 | 365 | unknown [Populus trichocarpa] | 0.976 | 0.813 | 0.898 | 1e-157 | |
| 224100481 | 342 | predicted protein [Populus trichocarpa] | 0.976 | 0.868 | 0.898 | 1e-157 | |
| 255544502 | 375 | Mitochondrial deoxynucleotide carrier, p | 0.976 | 0.792 | 0.882 | 1e-149 | |
| 225443377 | 356 | PREDICTED: protein brittle-1, chloroplas | 0.976 | 0.834 | 0.865 | 1e-147 | |
| 147790081 | 356 | hypothetical protein VITISV_024610 [Viti | 0.976 | 0.834 | 0.865 | 1e-147 | |
| 359483221 | 335 | PREDICTED: protein brittle-1, chloroplas | 0.976 | 0.886 | 0.865 | 1e-146 | |
| 356526346 | 380 | PREDICTED: protein brittle-1, chloroplas | 0.990 | 0.792 | 0.823 | 1e-141 | |
| 359807467 | 381 | uncharacterized protein LOC100795558 [Gl | 0.990 | 0.790 | 0.800 | 1e-138 | |
| 449447996 | 381 | PREDICTED: protein brittle-1, chloroplas | 0.967 | 0.771 | 0.835 | 1e-135 | |
| 297830712 | 348 | mitochondrial substrate carrier family p | 1.0 | 0.873 | 0.753 | 1e-134 |
| >gi|118488459|gb|ABK96044.1| unknown [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 558 bits (1439), Expect = e-157, Method: Compositional matrix adjust.
Identities = 267/297 (89%), Positives = 283/297 (95%)
Query: 1 MKVREVREFLSGALAGAMTKAVLAPLETIRTRMVVGVGSKNISGSFIEVIEQQGWQGLWA 60
M+ RE EFLSGALAGAMTKAVLAPLETIRTRMVVGVGSKNISGSF+EVIEQQGWQGLWA
Sbjct: 63 MRSREAGEFLSGALAGAMTKAVLAPLETIRTRMVVGVGSKNISGSFLEVIEQQGWQGLWA 122
Query: 61 GNGINMLRIIPTQAIELGTFECVKRAMTTAQEKWSQEECPKVQIGPLSLSFSLSWISPVA 120
GNGINMLRIIPTQAIELGTFECVKRAMT+AQEKWSQ ECP+VQ+GPLSLSFSLSWISPVA
Sbjct: 123 GNGINMLRIIPTQAIELGTFECVKRAMTSAQEKWSQSECPRVQLGPLSLSFSLSWISPVA 182
Query: 121 VAGAAAGVVSTLACHPLEVLKDRLTVSHDVYPSLSIAISKIYKEGGIGAFYAGISPTLIG 180
V GAAAG+ STLACHPLEVLKDRLTVS D+YP+LSIAISKIYK+GGIGAFYAGISPTLIG
Sbjct: 183 VGGAAAGIFSTLACHPLEVLKDRLTVSRDIYPTLSIAISKIYKDGGIGAFYAGISPTLIG 242
Query: 181 MLPYSTCYYFMYETLKKKYCNSKNKRSLNRPEMLALGALAGFTASTISFPLEVARKRLMV 240
MLPYSTCYYFMY+T+K YC KNK+SLNRPEML +GA +GFTAST+SFPLEVARKRLMV
Sbjct: 243 MLPYSTCYYFMYDTMKTSYCKGKNKKSLNRPEMLLIGAFSGFTASTLSFPLEVARKRLMV 302
Query: 241 GALQGKCPPHMAAALAEVIREEGLMGLYRGWGASCLKVMPSSGITWMFYEAWKDILL 297
GALQGKCPPHMAAAL+EVIRE GLMGLYRGWGASCLKVMPSSGITWMFYEAWKDILL
Sbjct: 303 GALQGKCPPHMAAALSEVIREGGLMGLYRGWGASCLKVMPSSGITWMFYEAWKDILL 359
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224100481|ref|XP_002311894.1| predicted protein [Populus trichocarpa] gi|222851714|gb|EEE89261.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
| >gi|255544502|ref|XP_002513312.1| Mitochondrial deoxynucleotide carrier, putative [Ricinus communis] gi|223547220|gb|EEF48715.1| Mitochondrial deoxynucleotide carrier, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
| >gi|225443377|ref|XP_002266396.1| PREDICTED: protein brittle-1, chloroplastic/amyloplastic isoform 1 [Vitis vinifera] gi|297735760|emb|CBI18447.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
| >gi|147790081|emb|CAN64851.1| hypothetical protein VITISV_024610 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
| >gi|359483221|ref|XP_003632922.1| PREDICTED: protein brittle-1, chloroplastic/amyloplastic isoform 2 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
| >gi|356526346|ref|XP_003531779.1| PREDICTED: protein brittle-1, chloroplastic/amyloplastic-like [Glycine max] | Back alignment and taxonomy information |
|---|
| >gi|359807467|ref|NP_001241139.1| uncharacterized protein LOC100795558 [Glycine max] gi|255648051|gb|ACU24481.1| unknown [Glycine max] | Back alignment and taxonomy information |
|---|
| >gi|449447996|ref|XP_004141752.1| PREDICTED: protein brittle-1, chloroplastic/amyloplastic-like [Cucumis sativus] gi|449491783|ref|XP_004159002.1| PREDICTED: protein brittle-1, chloroplastic/amyloplastic-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
| >gi|297830712|ref|XP_002883238.1| mitochondrial substrate carrier family protein [Arabidopsis lyrata subsp. lyrata] gi|297329078|gb|EFH59497.1| mitochondrial substrate carrier family protein [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
|---|
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 304 | ||||||
| TAIR|locus:2087545 | 348 | AT3G20240 "AT3G20240" [Arabido | 0.996 | 0.870 | 0.732 | 4.1e-120 | |
| TAIR|locus:2127851 | 392 | SHS1 "AT4G32400" [Arabidopsis | 0.549 | 0.426 | 0.434 | 2.9e-54 | |
| MGI|MGI:1914222 | 467 | Slc25a23 "solute carrier famil | 0.529 | 0.344 | 0.329 | 3.1e-32 | |
| ZFIN|ZDB-GENE-030131-3299 | 321 | slc25a16 "solute carrier famil | 0.546 | 0.517 | 0.352 | 1.1e-31 | |
| WB|WBGene00009666 | 294 | F43G9.3 [Caenorhabditis elegan | 0.552 | 0.571 | 0.358 | 6.1e-31 | |
| UNIPROTKB|F1NH71 | 300 | SLC25A42 "Uncharacterized prot | 0.904 | 0.916 | 0.296 | 6.9e-31 | |
| RGD|1588586 | 467 | Slc25a23 "solute carrier famil | 0.888 | 0.578 | 0.303 | 4.9e-30 | |
| UNIPROTKB|F1NWC1 | 324 | SLC25A16 "Uncharacterized prot | 0.546 | 0.512 | 0.331 | 1.1e-29 | |
| UNIPROTKB|C8C417 | 501 | SLC25A25 "Solute carrier famil | 0.878 | 0.532 | 0.302 | 3.7e-29 | |
| UNIPROTKB|Q8N5S1 | 370 | SLC25A41 "Solute carrier famil | 0.516 | 0.424 | 0.331 | 7.1e-29 |
| TAIR|locus:2087545 AT3G20240 "AT3G20240" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1182 (421.1 bits), Expect = 4.1e-120, P = 4.1e-120
Identities = 222/303 (73%), Positives = 258/303 (85%)
Query: 2 KVREVREFLSGALAGAMTKAVLAPLETIRTRMVVGVGSKNISGSFIEVIEQQGWQGLWAG 61
K RE REFLSGALAGAMTKAVLAPLETIRTRM+VGVGS++I GSF+EV+++QGWQGLWAG
Sbjct: 45 KSREAREFLSGALAGAMTKAVLAPLETIRTRMIVGVGSRSIPGSFLEVVQKQGWQGLWAG 104
Query: 62 NGINMLRIIPTQAIELGTFECVKRAMTTAQEKWSQEECPKVQIGPLSLSFSLSWISPXXX 121
N INM+RIIPTQAIELGTFE VKRAMT+AQ K + E K++IG S S S+SWISP
Sbjct: 105 NEINMIRIIPTQAIELGTFEWVKRAMTSAQVKLKKIEDAKIEIGDFSFSPSISWISPVAV 164
Query: 122 XXXXXXXXSTLACHPLEVLKDRLTVSHDVYPSLSIAISKIYKEGGIGAFYAGISPTLIGM 181
STL CHPLEVLKDRLTVS ++YPSLS+AI +I++ GI FYAG+ PTL+GM
Sbjct: 165 AGASAGIASTLVCHPLEVLKDRLTVSPEIYPSLSLAIPRIFRADGIRGFYAGLGPTLVGM 224
Query: 182 LPYSTCYYFMYETLKKKYCNSKNKRSLNRPEMLALGALAGFTASTISFPLEVARKRLMVG 241
LPYSTCYYFMY+ +K YC SKNK++L+RPEML LGALAG TASTISFPLEVARKRLMVG
Sbjct: 225 LPYSTCYYFMYDKMKTSYCKSKNKKALSRPEMLVLGALAGLTASTISFPLEVARKRLMVG 284
Query: 242 ALQGKCPPHMAAALAEVIREEGLMGLYRGWGASCLKVMPSSGITWMFYEAWKDILLPLKP 301
AL+G+CPP+MAAA+AEV+++EG+MGLYRGWGASCLKVMPSSGITW+FYEAWKDILL
Sbjct: 285 ALKGECPPNMAAAIAEVVKKEGVMGLYRGWGASCLKVMPSSGITWVFYEAWKDILLAANT 344
Query: 302 GPI 304
P+
Sbjct: 345 KPL 347
|
|
| TAIR|locus:2127851 SHS1 "AT4G32400" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| MGI|MGI:1914222 Slc25a23 "solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 23" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
|---|
| ZFIN|ZDB-GENE-030131-3299 slc25a16 "solute carrier family 25, member 16" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
|---|
| WB|WBGene00009666 F43G9.3 [Caenorhabditis elegans (taxid:6239)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|F1NH71 SLC25A42 "Uncharacterized protein" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
|---|
| RGD|1588586 Slc25a23 "solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 23" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|F1NWC1 SLC25A16 "Uncharacterized protein" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|C8C417 SLC25A25 "Solute carrier family 25 member 25" [Sus scrofa (taxid:9823)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|Q8N5S1 SLC25A41 "Solute carrier family 25 member 41" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 304 | |||
| pfam00153 | 96 | pfam00153, Mito_carr, Mitochondrial carrier protei | 6e-20 | |
| pfam00153 | 96 | pfam00153, Mito_carr, Mitochondrial carrier protei | 3e-19 | |
| pfam00153 | 96 | pfam00153, Mito_carr, Mitochondrial carrier protei | 2e-18 | |
| PTZ00169 | 300 | PTZ00169, PTZ00169, ADP/ATP transporter on adenyla | 1e-17 | |
| PTZ00168 | 259 | PTZ00168, PTZ00168, mitochondrial carrier protein; | 1e-10 | |
| PTZ00168 | 259 | PTZ00168, PTZ00168, mitochondrial carrier protein; | 1e-08 |
| >gnl|CDD|215754 pfam00153, Mito_carr, Mitochondrial carrier protein | Back alignment and domain information |
|---|
Score = 82.3 bits (204), Expect = 6e-20
Identities = 33/96 (34%), Positives = 47/96 (48%), Gaps = 6/96 (6%)
Query: 114 SWISPVA--VAGAAAGVVSTLACHPLEVLKDRL----TVSHDVYPSLSIAISKIYKEGGI 167
S +S +A +AG AG ++ +PL+V+K RL Y + KIYKE GI
Sbjct: 1 SPLSFLASLLAGGIAGAIAATVTYPLDVVKTRLQSSAAGGSRKYKGILDCFKKIYKEEGI 60
Query: 168 GAFYAGISPTLIGMLPYSTCYYFMYETLKKKYCNSK 203
Y G+ P L+ + P + Y+ YETLKK
Sbjct: 61 RGLYKGLLPNLLRVAPAAAIYFGTYETLKKLLLKKL 96
|
Length = 96 |
| >gnl|CDD|215754 pfam00153, Mito_carr, Mitochondrial carrier protein | Back alignment and domain information |
|---|
| >gnl|CDD|215754 pfam00153, Mito_carr, Mitochondrial carrier protein | Back alignment and domain information |
|---|
| >gnl|CDD|240302 PTZ00169, PTZ00169, ADP/ATP transporter on adenylate translocase; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|185494 PTZ00168, PTZ00168, mitochondrial carrier protein; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|185494 PTZ00168, PTZ00168, mitochondrial carrier protein; Provisional | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 304 | |||
| KOG0752 | 320 | consensus Mitochondrial solute carrier protein [En | 100.0 | |
| KOG0764 | 299 | consensus Mitochondrial FAD carrier protein [Energ | 100.0 | |
| PTZ00169 | 300 | ADP/ATP transporter on adenylate translocase; Prov | 100.0 | |
| KOG0760 | 302 | consensus Mitochondrial carrier protein MRS3/4 [En | 100.0 | |
| KOG0758 | 297 | consensus Mitochondrial carnitine-acylcarnitine ca | 100.0 | |
| KOG0753 | 317 | consensus Mitochondrial fatty acid anion carrier p | 100.0 | |
| KOG0759 | 286 | consensus Mitochondrial oxoglutarate/malate carrie | 100.0 | |
| KOG0757 | 319 | consensus Mitochondrial carrier protein - Rim2p/Mr | 100.0 | |
| PTZ00168 | 259 | mitochondrial carrier protein; Provisional | 100.0 | |
| KOG0754 | 294 | consensus Mitochondrial oxodicarboxylate carrier p | 100.0 | |
| KOG0762 | 311 | consensus Mitochondrial carrier protein [Energy pr | 100.0 | |
| KOG0761 | 361 | consensus Mitochondrial carrier protein CGI-69 [En | 100.0 | |
| KOG0751 | 694 | consensus Mitochondrial aspartate/glutamate carrie | 100.0 | |
| KOG0768 | 323 | consensus Mitochondrial carrier protein PET8 [Ener | 100.0 | |
| KOG0749 | 298 | consensus Mitochondrial ADP/ATP carrier proteins [ | 100.0 | |
| KOG0766 | 297 | consensus Predicted mitochondrial carrier protein | 100.0 | |
| KOG0755 | 320 | consensus Mitochondrial oxaloacetate carrier prote | 100.0 | |
| KOG0765 | 333 | consensus Predicted mitochondrial carrier protein | 100.0 | |
| KOG0770 | 353 | consensus Predicted mitochondrial carrier protein | 100.0 | |
| KOG0036 | 463 | consensus Predicted mitochondrial carrier protein | 100.0 | |
| KOG0756 | 299 | consensus Mitochondrial tricarboxylate/dicarboxyla | 100.0 | |
| KOG0769 | 308 | consensus Predicted mitochondrial carrier protein | 100.0 | |
| KOG0750 | 304 | consensus Mitochondrial solute carrier protein [En | 100.0 | |
| KOG0767 | 333 | consensus Mitochondrial phosphate carrier protein | 100.0 | |
| KOG0763 | 301 | consensus Mitochondrial ornithine transporter [Ene | 100.0 | |
| KOG0764 | 299 | consensus Mitochondrial FAD carrier protein [Energ | 100.0 | |
| KOG0760 | 302 | consensus Mitochondrial carrier protein MRS3/4 [En | 100.0 | |
| PTZ00169 | 300 | ADP/ATP transporter on adenylate translocase; Prov | 100.0 | |
| KOG0752 | 320 | consensus Mitochondrial solute carrier protein [En | 100.0 | |
| KOG0757 | 319 | consensus Mitochondrial carrier protein - Rim2p/Mr | 100.0 | |
| KOG0753 | 317 | consensus Mitochondrial fatty acid anion carrier p | 100.0 | |
| KOG0758 | 297 | consensus Mitochondrial carnitine-acylcarnitine ca | 99.97 | |
| PTZ00168 | 259 | mitochondrial carrier protein; Provisional | 99.97 | |
| KOG0768 | 323 | consensus Mitochondrial carrier protein PET8 [Ener | 99.97 | |
| KOG0762 | 311 | consensus Mitochondrial carrier protein [Energy pr | 99.97 | |
| KOG0754 | 294 | consensus Mitochondrial oxodicarboxylate carrier p | 99.97 | |
| KOG0759 | 286 | consensus Mitochondrial oxoglutarate/malate carrie | 99.96 | |
| KOG0761 | 361 | consensus Mitochondrial carrier protein CGI-69 [En | 99.96 | |
| KOG0767 | 333 | consensus Mitochondrial phosphate carrier protein | 99.96 | |
| KOG0770 | 353 | consensus Predicted mitochondrial carrier protein | 99.96 | |
| KOG1519 | 297 | consensus Predicted mitochondrial carrier protein | 99.94 | |
| KOG0751 | 694 | consensus Mitochondrial aspartate/glutamate carrie | 99.94 | |
| KOG0036 | 463 | consensus Predicted mitochondrial carrier protein | 99.94 | |
| KOG0766 | 297 | consensus Predicted mitochondrial carrier protein | 99.94 | |
| KOG0769 | 308 | consensus Predicted mitochondrial carrier protein | 99.94 | |
| KOG0763 | 301 | consensus Mitochondrial ornithine transporter [Ene | 99.93 | |
| KOG0756 | 299 | consensus Mitochondrial tricarboxylate/dicarboxyla | 99.93 | |
| KOG0765 | 333 | consensus Predicted mitochondrial carrier protein | 99.93 | |
| KOG0750 | 304 | consensus Mitochondrial solute carrier protein [En | 99.93 | |
| KOG0755 | 320 | consensus Mitochondrial oxaloacetate carrier prote | 99.9 | |
| KOG2745 | 321 | consensus Mitochondrial carrier protein [General f | 99.87 | |
| KOG0749 | 298 | consensus Mitochondrial ADP/ATP carrier proteins [ | 99.86 | |
| PF00153 | 95 | Mito_carr: Mitochondrial carrier protein; InterPro | 99.78 | |
| KOG2954 | 427 | consensus Mitochondrial carrier protein [General f | 99.77 | |
| PF00153 | 95 | Mito_carr: Mitochondrial carrier protein; InterPro | 99.7 | |
| KOG2745 | 321 | consensus Mitochondrial carrier protein [General f | 99.63 | |
| KOG1519 | 297 | consensus Predicted mitochondrial carrier protein | 99.45 | |
| KOG2954 | 427 | consensus Mitochondrial carrier protein [General f | 98.77 |
| >KOG0752 consensus Mitochondrial solute carrier protein [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.9e-58 Score=383.99 Aligned_cols=280 Identities=38% Similarity=0.647 Sum_probs=248.5
Q ss_pred hhhHHHHHHHHHHHHHHHhhchHHHhHHHHhcCC------CCCChHHHHHHHHHhhccceeccccchhhhhhccchhhhH
Q 022010 4 REVREFLSGALAGAMTKAVLAPLETIRTRMVVGV------GSKNISGSFIEVIEQQGWQGLWAGNGINMLRIIPTQAIEL 77 (304)
Q Consensus 4 ~~~~~~~~g~~a~~~~~~~~~Pld~ik~~~q~~~------~~~~~~~~~~~i~~~~G~~~ly~G~~~~l~~~~~~~~~~~ 77 (304)
...+.+++|++|++++.+++.|+|+||+|+|++. .+.+..+.+++|+++||++|||||..+..++.+++.++.|
T Consensus 26 ~~~~~llAGgvAGavsrt~~APLd~iKIlfQ~~~~~~~~~k~~g~~~~~~~I~~eEG~~g~wkGn~~~~~r~~pY~avqf 105 (320)
T KOG0752|consen 26 TGAKSLLAGGVAGAVSRTVTAPLDRIKILFQVQVEPSKTSKYPGVIQAFKSIYREEGLRGFWKGNGPAQIRIIPYGAVQF 105 (320)
T ss_pred HHHHHHhcchHHHHHHHHhcCchhHceEEEEeccccccccccccHHHHHHHHHHHhchhhhhcCcccceeeeeecchhhh
Confidence 4567899999999999999999999999999975 2467899999999999999999999999999999999999
Q ss_pred hhHHHHHHHHhHhhhhhhcccCCcccCCCCcccccccchhhHHHHhhHHHHHHHhhcccHHHHHHHHHhcCC--CCCCHH
Q 022010 78 GTFECVKRAMTTAQEKWSQEECPKVQIGPLSLSFSLSWISPVAVAGAAAGVVSTLACHPLEVLKDRLTVSHD--VYPSLS 155 (304)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~v~~P~d~ik~r~q~~~~--~~~~~~ 155 (304)
..||..+++.....+ . ........+++|++||.++.++++|+|++|+|+-++.. .|++..
T Consensus 106 ~aye~~k~~~~~~~~--------------~----~~~~~~~~l~aGalAG~~a~~~tyPLDlvRtRLa~q~~~~~y~~l~ 167 (320)
T KOG0752|consen 106 SAYEQYKKLVLGVDP--------------N----GSLSPLVRLVAGALAGMTATLATYPLDLLRTRLAVQGELKVYRGLL 167 (320)
T ss_pred hHHHHhhhhhhccCc--------------c----cccchhHHHHHHHHHHHHHHHhcCcHHHhhhheeeecccccCCcHH
Confidence 999999986332111 0 02223456789999999999999999999999988765 599999
Q ss_pred HHHHHHHHhcchhhcccChhhhhhccccchhHHHHHHHHHHH-HhhcccCCCCCChhHHHHHHHHHHHhHhhhhccHHHH
Q 022010 156 IAISKIYKEGGIGAFYAGISPTLIGMLPYSTCYYFMYETLKK-KYCNSKNKRSLNRPEMLALGALAGFTASTISFPLEVA 234 (304)
Q Consensus 156 ~~~~~i~~~~G~~~ly~G~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~P~d~v 234 (304)
+++++|+++||++|||||+.|++++.+|+.++.|.+||.+++ .+.+...+++.+.+.++++|++||.++..+++|||+|
T Consensus 168 ~a~~~I~~~eGi~gfYrGl~ptllgi~Pyag~~F~~Yd~lk~~~~~~~~~~~~~~~~~~l~~GalAG~~aqti~yPlD~v 247 (320)
T KOG0752|consen 168 HAFKTIYREEGIRGFYRGLGPTLLGIAPYAGINFFAYDTLKKWQYLKSSGNKELSNFERLLCGALAGAVAQTITYPLDTV 247 (320)
T ss_pred HHHHHHHHhcchhhhhcCcchhhheehhhhhhHHHHHHHHHHhhcccccccchhhhHHHHHHHHHHHHHHhhhcccHHHH
Confidence 999999999999999999999999999999999999999999 5555555566778889999999999999999999999
Q ss_pred HHHHhcCccc----CCCCccHHHHHHHHHHhhcccccccchHhhHhhhhhhhhHHHHHHHHHHHhhcCCCC
Q 022010 235 RKRLMVGALQ----GKCPPHMAAALAEVIREEGLMGLYRGWGASCLKVMPSSGITWMFYEAWKDILLPLKP 301 (304)
Q Consensus 235 k~r~q~~~~~----~~~~~~~~~~~~~~~~~~G~~~ly~G~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~ 301 (304)
|+|||+.... ..++.++++|++.++++||+.|||||+.|++++.+|+.++.|.+||.+|+++.....
T Consensus 248 RrrmQ~~~~~~~~~~~~~~~~~~~~~~i~~~EG~~gLYkGl~p~~lK~~P~~ai~F~~Ye~~k~~l~~~~~ 318 (320)
T KOG0752|consen 248 RRRMQLGGLKYFGGGFRYKGVLDAFRQIVKTEGVKGLYKGLSPNLLKVVPSVAISFTTYEILKDLLRLLKR 318 (320)
T ss_pred HHHHhccCccccccccccccHHHHHHHHHHHhhhhhhhccccHHHHHhcccceeeeehHHHHHHHhhcccc
Confidence 9999997643 235689999999999999999999999999999999999999999999988876543
|
|
| >KOG0764 consensus Mitochondrial FAD carrier protein [Energy production and conversion] | Back alignment and domain information |
|---|
| >PTZ00169 ADP/ATP transporter on adenylate translocase; Provisional | Back alignment and domain information |
|---|
| >KOG0760 consensus Mitochondrial carrier protein MRS3/4 [Energy production and conversion] | Back alignment and domain information |
|---|
| >KOG0758 consensus Mitochondrial carnitine-acylcarnitine carrier protein [Energy production and conversion] | Back alignment and domain information |
|---|
| >KOG0753 consensus Mitochondrial fatty acid anion carrier protein/Uncoupling protein [Energy production and conversion] | Back alignment and domain information |
|---|
| >KOG0759 consensus Mitochondrial oxoglutarate/malate carrier proteins [Energy production and conversion] | Back alignment and domain information |
|---|
| >KOG0757 consensus Mitochondrial carrier protein - Rim2p/Mrs12p [Energy production and conversion] | Back alignment and domain information |
|---|
| >PTZ00168 mitochondrial carrier protein; Provisional | Back alignment and domain information |
|---|
| >KOG0754 consensus Mitochondrial oxodicarboxylate carrier protein [Energy production and conversion] | Back alignment and domain information |
|---|
| >KOG0762 consensus Mitochondrial carrier protein [Energy production and conversion] | Back alignment and domain information |
|---|
| >KOG0761 consensus Mitochondrial carrier protein CGI-69 [Energy production and conversion] | Back alignment and domain information |
|---|
| >KOG0751 consensus Mitochondrial aspartate/glutamate carrier protein Aralar/Citrin (contains EF-hand Ca2+-binding domains) [Energy production and conversion] | Back alignment and domain information |
|---|
| >KOG0768 consensus Mitochondrial carrier protein PET8 [Energy production and conversion] | Back alignment and domain information |
|---|
| >KOG0749 consensus Mitochondrial ADP/ATP carrier proteins [Energy production and conversion] | Back alignment and domain information |
|---|
| >KOG0766 consensus Predicted mitochondrial carrier protein [Energy production and conversion] | Back alignment and domain information |
|---|
| >KOG0755 consensus Mitochondrial oxaloacetate carrier protein [Energy production and conversion] | Back alignment and domain information |
|---|
| >KOG0765 consensus Predicted mitochondrial carrier protein [Energy production and conversion] | Back alignment and domain information |
|---|
| >KOG0770 consensus Predicted mitochondrial carrier protein [Energy production and conversion] | Back alignment and domain information |
|---|
| >KOG0036 consensus Predicted mitochondrial carrier protein [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
| >KOG0756 consensus Mitochondrial tricarboxylate/dicarboxylate carrier proteins [Energy production and conversion] | Back alignment and domain information |
|---|
| >KOG0769 consensus Predicted mitochondrial carrier protein [Energy production and conversion] | Back alignment and domain information |
|---|
| >KOG0750 consensus Mitochondrial solute carrier protein [Energy production and conversion] | Back alignment and domain information |
|---|
| >KOG0767 consensus Mitochondrial phosphate carrier protein [Energy production and conversion] | Back alignment and domain information |
|---|
| >KOG0763 consensus Mitochondrial ornithine transporter [Energy production and conversion] | Back alignment and domain information |
|---|
| >KOG0764 consensus Mitochondrial FAD carrier protein [Energy production and conversion] | Back alignment and domain information |
|---|
| >KOG0760 consensus Mitochondrial carrier protein MRS3/4 [Energy production and conversion] | Back alignment and domain information |
|---|
| >PTZ00169 ADP/ATP transporter on adenylate translocase; Provisional | Back alignment and domain information |
|---|
| >KOG0752 consensus Mitochondrial solute carrier protein [Energy production and conversion] | Back alignment and domain information |
|---|
| >KOG0757 consensus Mitochondrial carrier protein - Rim2p/Mrs12p [Energy production and conversion] | Back alignment and domain information |
|---|
| >KOG0753 consensus Mitochondrial fatty acid anion carrier protein/Uncoupling protein [Energy production and conversion] | Back alignment and domain information |
|---|
| >KOG0758 consensus Mitochondrial carnitine-acylcarnitine carrier protein [Energy production and conversion] | Back alignment and domain information |
|---|
| >PTZ00168 mitochondrial carrier protein; Provisional | Back alignment and domain information |
|---|
| >KOG0768 consensus Mitochondrial carrier protein PET8 [Energy production and conversion] | Back alignment and domain information |
|---|
| >KOG0762 consensus Mitochondrial carrier protein [Energy production and conversion] | Back alignment and domain information |
|---|
| >KOG0754 consensus Mitochondrial oxodicarboxylate carrier protein [Energy production and conversion] | Back alignment and domain information |
|---|
| >KOG0759 consensus Mitochondrial oxoglutarate/malate carrier proteins [Energy production and conversion] | Back alignment and domain information |
|---|
| >KOG0761 consensus Mitochondrial carrier protein CGI-69 [Energy production and conversion] | Back alignment and domain information |
|---|
| >KOG0767 consensus Mitochondrial phosphate carrier protein [Energy production and conversion] | Back alignment and domain information |
|---|
| >KOG0770 consensus Predicted mitochondrial carrier protein [Energy production and conversion] | Back alignment and domain information |
|---|
| >KOG1519 consensus Predicted mitochondrial carrier protein [General function prediction only] | Back alignment and domain information |
|---|
| >KOG0751 consensus Mitochondrial aspartate/glutamate carrier protein Aralar/Citrin (contains EF-hand Ca2+-binding domains) [Energy production and conversion] | Back alignment and domain information |
|---|
| >KOG0036 consensus Predicted mitochondrial carrier protein [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
| >KOG0766 consensus Predicted mitochondrial carrier protein [Energy production and conversion] | Back alignment and domain information |
|---|
| >KOG0769 consensus Predicted mitochondrial carrier protein [Energy production and conversion] | Back alignment and domain information |
|---|
| >KOG0763 consensus Mitochondrial ornithine transporter [Energy production and conversion] | Back alignment and domain information |
|---|
| >KOG0756 consensus Mitochondrial tricarboxylate/dicarboxylate carrier proteins [Energy production and conversion] | Back alignment and domain information |
|---|
| >KOG0765 consensus Predicted mitochondrial carrier protein [Energy production and conversion] | Back alignment and domain information |
|---|
| >KOG0750 consensus Mitochondrial solute carrier protein [Energy production and conversion] | Back alignment and domain information |
|---|
| >KOG0755 consensus Mitochondrial oxaloacetate carrier protein [Energy production and conversion] | Back alignment and domain information |
|---|
| >KOG2745 consensus Mitochondrial carrier protein [General function prediction only] | Back alignment and domain information |
|---|
| >KOG0749 consensus Mitochondrial ADP/ATP carrier proteins [Energy production and conversion] | Back alignment and domain information |
|---|
| >PF00153 Mito_carr: Mitochondrial carrier protein; InterPro: IPR018108 A variety of substrate carrier proteins that are involved in energy transfer are found in the inner mitochondrial membrane or integral to the membrane of other eukaryotic organelles such as the peroxisome [, , , , , ] | Back alignment and domain information |
|---|
| >KOG2954 consensus Mitochondrial carrier protein [General function prediction only] | Back alignment and domain information |
|---|
| >PF00153 Mito_carr: Mitochondrial carrier protein; InterPro: IPR018108 A variety of substrate carrier proteins that are involved in energy transfer are found in the inner mitochondrial membrane or integral to the membrane of other eukaryotic organelles such as the peroxisome [, , , , , ] | Back alignment and domain information |
|---|
| >KOG2745 consensus Mitochondrial carrier protein [General function prediction only] | Back alignment and domain information |
|---|
| >KOG1519 consensus Predicted mitochondrial carrier protein [General function prediction only] | Back alignment and domain information |
|---|
| >KOG2954 consensus Mitochondrial carrier protein [General function prediction only] | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 304 | ||||
| 1okc_A | 297 | Structure Of Mitochondrial AdpATP CARRIER IN COMPLE | 5e-15 | ||
| 1okc_A | 297 | Structure Of Mitochondrial AdpATP CARRIER IN COMPLE | 4e-05 | ||
| 2lck_A | 303 | Structure Of The Mitochondrial Uncoupling Protein 2 | 2e-06 |
| >pdb|1OKC|A Chain A, Structure Of Mitochondrial AdpATP CARRIER IN COMPLEX WITH Carboxyatractyloside Length = 297 | Back alignment and structure |
|
| >pdb|1OKC|A Chain A, Structure Of Mitochondrial AdpATP CARRIER IN COMPLEX WITH Carboxyatractyloside Length = 297 | Back alignment and structure |
| >pdb|2LCK|A Chain A, Structure Of The Mitochondrial Uncoupling Protein 2 Determined By Nmr Molecular Fragment Replacement Length = 303 | Back alignment and structure |
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 304 | |||
| 1okc_A | 297 | ADP, ATP carrier protein heart isoform T1; mitocho | 8e-81 | |
| 1okc_A | 297 | ADP, ATP carrier protein heart isoform T1; mitocho | 8e-37 | |
| 1okc_A | 297 | ADP, ATP carrier protein heart isoform T1; mitocho | 5e-14 | |
| 2lck_A | 303 | Mitochondrial uncoupling protein 2; membrane prote | 7e-39 | |
| 2lck_A | 303 | Mitochondrial uncoupling protein 2; membrane prote | 1e-21 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 1e-04 |
| >1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Length = 297 | Back alignment and structure |
|---|
Score = 246 bits (629), Expect = 8e-81
Identities = 64/309 (20%), Positives = 131/309 (42%), Gaps = 37/309 (11%)
Query: 6 VREFLSGALAGAMTKAVLAPLETIRTRMVVGVGS---------KNISGSFIEVIEQQGWQ 56
+++FL+G +A A++K +AP+E ++ + V S K I + + ++QG+
Sbjct: 8 LKDFLAGGVAAAISKTAVAPIERVKLLLQVQHASKQISAEKQYKGIIDCVVRIPKEQGFL 67
Query: 57 GLWAGNGINMLRIIPTQAIELGTFECVKRAMTTAQEKWSQEECPKVQIGPLSLSFSLSWI 116
W GN N++R PTQA+ + K+ ++ Q +
Sbjct: 68 SFWRGNLANVIRYFPTQALNFAFKDKYKQIFLGGVDRHKQFW---------------RYF 112
Query: 117 SPVAVAGAAAGVVSTLACHPLEVLKDRLTV------SHDVYPSLSIAISKIYKEGGIGAF 170
+ +G AAG S +PL+ + RL + + L I+KI+K G+
Sbjct: 113 AGNLASGGAAGATSLCFVYPLDFARTRLAADVGKGAAQREFTGLGNCITKIFKSDGLRGL 172
Query: 171 YAGISPTLIGMLPYSTCYYFMYETLKKKYCNSKNKRSLNRPEMLALGALAGFTASTISFP 230
Y G + ++ G++ Y Y+ +Y+T K + KN ++ + A +S+P
Sbjct: 173 YQGFNVSVQGIIIYRAAYFGVYDTAKGMLPDPKN---VHIIVSWMIAQTVTAVAGLVSYP 229
Query: 231 LEVARKRLMVGALQGKCPPH---MAAALAEVIREEGLMGLYRGWGASCLKVMPSSGITWM 287
+ R+R+M+ + + ++ ++EG ++G ++ L+ M +
Sbjct: 230 FDTVRRRMMMQSGRKGADIMYTGTVDCWRKIAKDEGPKAFFKGAWSNVLRGMG-GAFVLV 288
Query: 288 FYEAWKDIL 296
Y+ K +
Sbjct: 289 LYDEIKKFV 297
|
| >1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Length = 297 | Back alignment and structure |
|---|
| >1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Length = 297 | Back alignment and structure |
|---|
| >2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Length = 303 | Back alignment and structure |
|---|
| >2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Length = 303 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 304 | |||
| 1okc_A | 297 | ADP, ATP carrier protein heart isoform T1; mitocho | 100.0 | |
| 2lck_A | 303 | Mitochondrial uncoupling protein 2; membrane prote | 100.0 | |
| 1okc_A | 297 | ADP, ATP carrier protein heart isoform T1; mitocho | 100.0 | |
| 2lck_A | 303 | Mitochondrial uncoupling protein 2; membrane prote | 100.0 |
| >1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-55 Score=381.94 Aligned_cols=275 Identities=22% Similarity=0.410 Sum_probs=236.6
Q ss_pred hhhhHHHHHHHHHHHHHHHhhchHHHhHHHHhcCC---------CCCChHHHHHHHHHhhccceeccccchhhhhhccch
Q 022010 3 VREVREFLSGALAGAMTKAVLAPLETIRTRMVVGV---------GSKNISGSFIEVIEQQGWQGLWAGNGINMLRIIPTQ 73 (304)
Q Consensus 3 ~~~~~~~~~g~~a~~~~~~~~~Pld~ik~~~q~~~---------~~~~~~~~~~~i~~~~G~~~ly~G~~~~l~~~~~~~ 73 (304)
.+.++++++|++|++++.++++|+|+||+|+|++. .+.+..+++++++++||++|||||+.+++++.++..
T Consensus 5 ~~~~~~~~aG~~ag~~~~~~~~Pld~vKtrlQ~~~~~~~~~~~~~~~~~~~~~~~i~~~eG~~glyrG~~~~l~~~~~~~ 84 (297)
T 1okc_A 5 LSFLKDFLAGGVAAAISKTAVAPIERVKLLLQVQHASKQISAEKQYKGIIDCVVRIPKEQGFLSFWRGNLANVIRYFPTQ 84 (297)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHGGGCSSCCGGGSCCSHHHHHHHHHHHHCGGGGGTTTHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHhcccccccccccccccHHHHHHHHHhccchhheecccHHHHHHHHHHH
Confidence 45678999999999999999999999999999864 367899999999999999999999999999999999
Q ss_pred hhhHhhHHHHHHHHhHhhhhhhcccCCcccCCCCcccccccchhhHHHHhhHHHHHHHhhcccHHHHHHHHHhcC-----
Q 022010 74 AIELGTFECVKRAMTTAQEKWSQEECPKVQIGPLSLSFSLSWISPVAVAGAAAGVVSTLACHPLEVLKDRLTVSH----- 148 (304)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~v~~P~d~ik~r~q~~~----- 148 (304)
+++|.+||.+++.+....+ +. ..........+++|++||+++.++++|+|++|+|+|++.
T Consensus 85 ~~~f~~ye~~k~~~~~~~~-------------~~--~~~~~~~~~~~~ag~~ag~~~~~~~~Pld~vktrlq~~~~~~~~ 149 (297)
T 1okc_A 85 ALNFAFKDKYKQIFLGGVD-------------RH--KQFWRYFAGNLASGGAAGATSLCFVYPLDFARTRLAADVGKGAA 149 (297)
T ss_dssp HHHHHHHHHHHHHHHTTCC-------------TT--TCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCSSTT
T ss_pred HHHHHHHHHHHHHhccccC-------------cc--cchHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHhccccCCCc
Confidence 9999999999985433110 00 001122355678999999999999999999999999974
Q ss_pred -CCCCCHHHHHHHHHHhcchhhcccChhhhhhccccchhHHHHHHHHHHHHhhcccCCCCCChhHHHHHHHHHHHhHhhh
Q 022010 149 -DVYPSLSIAISKIYKEGGIGAFYAGISPTLIGMLPYSTCYYFMYETLKKKYCNSKNKRSLNRPEMLALGALAGFTASTI 227 (304)
Q Consensus 149 -~~~~~~~~~~~~i~~~~G~~~ly~G~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~a~~~~~~~ 227 (304)
.+|++.++++++++++||+++||||+.|++++++|+++++|.+||.+++.+.+.. +.+....+++|++|+++++++
T Consensus 150 ~~~~~~~~~~~~~i~~~eG~~glyrG~~~~l~~~~~~~~~~f~~ye~~k~~~~~~~---~~~~~~~~~~g~~ag~~a~~~ 226 (297)
T 1okc_A 150 QREFTGLGNCITKIFKSDGLRGLYQGFNVSVQGIIIYRAAYFGVYDTAKGMLPDPK---NVHIIVSWMIAQTVTAVAGLV 226 (297)
T ss_dssp TCSCSSHHHHHHHHHHHHCHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHSSCGGG---CSCHHHHHHHHHHHHHHHHHH
T ss_pred CcCCCCHHHHHHHHHHhccHHHhcCCchHHHHHHHHHHHHHHHHHHHHHHHhccCC---CccHHHHHHHHHHHHHHHHHh
Confidence 3689999999999999999999999999999999999999999999999765432 345667799999999999999
Q ss_pred hccHHHHHHHHhcCccc---CCCCccHHHHHHHHHHhhcccccccchHhhHhhhhhhhhHHHHHHHHHHHhh
Q 022010 228 SFPLEVARKRLMVGALQ---GKCPPHMAAALAEVIREEGLMGLYRGWGASCLKVMPSSGITWMFYEAWKDIL 296 (304)
Q Consensus 228 ~~P~d~vk~r~q~~~~~---~~~~~~~~~~~~~~~~~~G~~~ly~G~~~~~~~~~~~~~~~~~~~e~~~~~~ 296 (304)
++|+|+||+|||.+... ...|.++++|+++++++||+++||||+.+++++. +..+++|.+||.+|+++
T Consensus 227 t~P~dvvktr~q~~~~~~~~~~~y~~~~~~~~~i~~~eG~~glyrG~~~~~~r~-~~~~~~f~~ye~~k~~l 297 (297)
T 1okc_A 227 SYPFDTVRRRMMMQSGRKGADIMYTGTVDCWRKIAKDEGPKAFFKGAWSNVLRG-MGGAFVLVLYDEIKKFV 297 (297)
T ss_dssp HHHHHHHHHHHHTTTTCCGGGCSCSSHHHHHHHHHHHHCGGGGGTTHHHHHHHH-HHHHHHHHHHHTC----
T ss_pred cChHHHHHHHHhhcCCCCCCCCCCCCHHHHHHHHHHHcCcCeEecchHHHHHhh-ccceeeehHHHHHHhhC
Confidence 99999999999986432 2368999999999999999999999999999996 56789999999998763
|
| >2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} | Back alignment and structure |
|---|
| >1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* | Back alignment and structure |
|---|
| >2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} | Back alignment and structure |
|---|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 304 | ||||
| d1okca_ | 292 | f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos ta | 3e-25 | |
| d1okca_ | 292 | f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos ta | 9e-10 |
| >d1okca_ f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos taurus), heart isoform t1 [TaxId: 9913]} Length = 292 | Back information, alignment and structure |
|---|
class: Membrane and cell surface proteins and peptides fold: Mitochondrial carrier superfamily: Mitochondrial carrier family: Mitochondrial carrier domain: ADP,ATP carrier protein species: Cow (Bos taurus), heart isoform t1 [TaxId: 9913]
Score = 100 bits (248), Expect = 3e-25
Identities = 63/303 (20%), Positives = 128/303 (42%), Gaps = 37/303 (12%)
Query: 6 VREFLSGALAGAMTKAVLAPLETIRTRMVVGVGS---------KNISGSFIEVIEQQGWQ 56
+++FL+G +A A++K +AP+E ++ + V S K I + + ++QG+
Sbjct: 7 LKDFLAGGVAAAISKTAVAPIERVKLLLQVQHASKQISAEKQYKGIIDCVVRIPKEQGFL 66
Query: 57 GLWAGNGINMLRIIPTQAIELGTFECVKRAMTTAQEKWSQEECPKVQIGPLSLSFSLSWI 116
W GN N++R PTQA+ + K+ ++ Q +
Sbjct: 67 SFWRGNLANVIRYFPTQALNFAFKDKYKQIFLGGVDRHKQFWR---------------YF 111
Query: 117 SPVAVAGAAAGVVSTLACHPLEVLKDRLTVS------HDVYPSLSIAISKIYKEGGIGAF 170
+ +G AAG S +PL+ + RL + L I+KI+K G+
Sbjct: 112 AGNLASGGAAGATSLCFVYPLDFARTRLAADVGKGAAQREFTGLGNCITKIFKSDGLRGL 171
Query: 171 YAGISPTLIGMLPYSTCYYFMYETLKKKYCNSKNKRSLNRPEMLALGALAGFTASTISFP 230
Y G + ++ G++ Y Y+ +Y+T K + KN + + A +S+P
Sbjct: 172 YQGFNVSVQGIIIYRAAYFGVYDTAKGMLPDPKNVHIIVS---WMIAQTVTAVAGLVSYP 228
Query: 231 LEVARKRLMVGALQGKCPPH---MAAALAEVIREEGLMGLYRGWGASCLKVMPSSGITWM 287
+ R+R+M+ + + ++ ++EG ++G ++ L+ M + +
Sbjct: 229 FDTVRRRMMMQSGRKGADIMYTGTVDCWRKIAKDEGPKAFFKGAWSNVLRGMGGA-FVLV 287
Query: 288 FYE 290
Y+
Sbjct: 288 LYD 290
|
| >d1okca_ f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos taurus), heart isoform t1 [TaxId: 9913]} Length = 292 | Back information, alignment and structure |
|---|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 304 | |||
| d1okca_ | 292 | ADP,ATP carrier protein {Cow (Bos taurus), heart i | 100.0 | |
| d1okca_ | 292 | ADP,ATP carrier protein {Cow (Bos taurus), heart i | 99.97 |
| >d1okca_ f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos taurus), heart isoform t1 [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Membrane and cell surface proteins and peptides fold: Mitochondrial carrier superfamily: Mitochondrial carrier family: Mitochondrial carrier domain: ADP,ATP carrier protein species: Cow (Bos taurus), heart isoform t1 [TaxId: 9913]
Probab=100.00 E-value=7.9e-51 Score=349.54 Aligned_cols=271 Identities=22% Similarity=0.417 Sum_probs=237.1
Q ss_pred hhhhHHHHHHHHHHHHHHHhhchHHHhHHHHhcCC---------CCCChHHHHHHHHHhhccceeccccchhhhhhccch
Q 022010 3 VREVREFLSGALAGAMTKAVLAPLETIRTRMVVGV---------GSKNISGSFIEVIEQQGWQGLWAGNGINMLRIIPTQ 73 (304)
Q Consensus 3 ~~~~~~~~~g~~a~~~~~~~~~Pld~ik~~~q~~~---------~~~~~~~~~~~i~~~~G~~~ly~G~~~~l~~~~~~~ 73 (304)
.+.++++++|++|++++.+++||||+||+|+|++. .+.+.++++++++++||+++||+|+.+.+++..+..
T Consensus 4 ~~~~~~~laG~~a~~i~~~~~~Pld~iK~r~Q~~~~~~~~~~~~~~~~~~~~~~~i~~~~G~~~ly~G~~~~l~~~~~~~ 83 (292)
T d1okca_ 4 LSFLKDFLAGGVAAAISKTAVAPIERVKLLLQVQHASKQISAEKQYKGIIDCVVRIPKEQGFLSFWRGNLANVIRYFPTQ 83 (292)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHGGGCSSCCGGGSCCSHHHHHHHHHHHHCGGGGGTTTHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhcCCCCCCCCcccccCCHHHHHHHHHHhhhhhhhhhccchhhhhhhccc
Confidence 46788999999999999999999999999999853 256899999999999999999999999999999999
Q ss_pred hhhHhhHHHHHHHHhHhhhhhhcccCCcccCCCCcccccccchhhHHHHhhHHHHHHHhhcccHHHHHHHHHhcC-----
Q 022010 74 AIELGTFECVKRAMTTAQEKWSQEECPKVQIGPLSLSFSLSWISPVAVAGAAAGVVSTLACHPLEVLKDRLTVSH----- 148 (304)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~v~~P~d~ik~r~q~~~----- 148 (304)
.++|.+|+.+++.+.+..... ..........+++|.+|++++.++++|+|++|+|+|.+.
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~a~~~~~~~~~P~~~ik~r~~~~~~~~~~ 148 (292)
T d1okca_ 84 ALNFAFKDKYKQIFLGGVDRH---------------KQFWRYFAGNLASGGAAGATSLCFVYPLDFARTRLAADVGKGAA 148 (292)
T ss_dssp HHHHHHHHHHHHHHHTTCCTT---------------TCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCSSTT
T ss_pred chhHHHHHHHHHHHhcccccc---------------cccchhhhhhhhhhhhhhhhHHhhhhhhhhhheeeecccccccc
Confidence 999999999998887632210 111222345678999999999999999999999999974
Q ss_pred -CCCCCHHHHHHHHHHhcchhhcccChhhhhhccccchhHHHHHHHHHHHHhhcccCCCCCChhHHHHHHHHHHHhHhhh
Q 022010 149 -DVYPSLSIAISKIYKEGGIGAFYAGISPTLIGMLPYSTCYYFMYETLKKKYCNSKNKRSLNRPEMLALGALAGFTASTI 227 (304)
Q Consensus 149 -~~~~~~~~~~~~i~~~~G~~~ly~G~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~a~~~~~~~ 227 (304)
..+.+..+.++++++++|+++||+|+.+.+++++++++++|..||.+++.+.+. ........++++.+++++++++
T Consensus 149 ~~~~~~~~~~~~~~~~~~G~~~l~~G~~~~~~~~~~~~~~~~~~~~~~k~~~~~~---~~~~~~~~~~~~~~~~~~a~~~ 225 (292)
T d1okca_ 149 QREFTGLGNCITKIFKSDGLRGLYQGFNVSVQGIIIYRAAYFGVYDTAKGMLPDP---KNVHIIVSWMIAQTVTAVAGLV 225 (292)
T ss_dssp TCSCSSHHHHHHHHHHHHCHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHSSCGG---GCSCHHHHHHHHHHHHHHHHHH
T ss_pred ccccccHHHHHHHhhhccchhhhhccccccccceehHhhhhhhhccchhhhcccc---cccchHHHHHHHHHHHHHHhhc
Confidence 357889999999999999999999999999999999999999999999876543 3356677799999999999999
Q ss_pred hccHHHHHHHHhcCcccC---CCCccHHHHHHHHHHhhcccccccchHhhHhhhhhhhhHHHHHHHHH
Q 022010 228 SFPLEVARKRLMVGALQG---KCPPHMAAALAEVIREEGLMGLYRGWGASCLKVMPSSGITWMFYEAW 292 (304)
Q Consensus 228 ~~P~d~vk~r~q~~~~~~---~~~~~~~~~~~~~~~~~G~~~ly~G~~~~~~~~~~~~~~~~~~~e~~ 292 (304)
++|+||||+|||.+.... ..|.++++|+++++++||+++||||+.+++++.++ ++++|.+||.+
T Consensus 226 t~P~dvvktR~q~~~~~~~~~~~y~~~~~~~~~i~~~eG~~~lyrG~~~~~~r~i~-~~i~~~~ye~l 292 (292)
T d1okca_ 226 SYPFDTVRRRMMMQSGRKGADIMYTGTVDCWRKIAKDEGPKAFFKGAWSNVLRGMG-GAFVLVLYDEI 292 (292)
T ss_dssp HHHHHHHHHHHHTTTTCCGGGCSCSSHHHHHHHHHHHHCGGGGGTTHHHHHHHHHH-HHHHHHHHHTC
T ss_pred cccHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHhcCcCcccccHHHHHHHHHH-HHhhhhHhhcC
Confidence 999999999999875433 26889999999999999999999999999999876 57889999963
|
| >d1okca_ f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos taurus), heart isoform t1 [TaxId: 9913]} | Back information, alignment and structure |
|---|