Citrus Sinensis ID: 022020

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300----
MADQNGLETKVSAALNCIDLSDPDIQKSAASLKQACMDSGFFYVINHGISKEFMDEVFAQSKKFFELPFDEKMKLWVERNRGYKQPLKNQFFDQETNQQAHGEAYSLVGPETEDDLDPEKPLCGPNVWPSADVLPGWKETMLRYQQEALNLGRKIGRIIALALDLDVDFFGKPEILGNAMPYVSFNHYGVQDADPSKEYILGTPAHSDPSLITLLATDEVPGLQICRNIHANPRVWENVVPLKDAFIVNIGDMLERMSNCVFRSTMHRVLFRQERYTIAYFVYPSNDAMIECFPTCKSEEKPPK
ccccccccccccccccEEEcccccHHHHHHHHHHHHHHccEEEEEcccccHHHHHHHHHHHHHHHcccHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccEEEcccccccccccccccccccccccccccEEEEcccccccEEEEccccccccEEEcccccccEEEEHHHHHHHHHcccccccccccccccccEEEEEEcccccccEEEccccccccccccc
ccccccccccccccccEEEcccccHHHHHHHHHHHHHHcccEEEEcccccHHHHHHHHHHHHHHHcccHHHHHHHHccccccccccccccccccccccccHHHEEEEEcccccccccccHcccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHcccccccEEEEEEEccccccccccccEEcccccccccEEEEEEccccccEEEEEcccccccEEEEEcccccEEEEEcccHHHHHccccEcEEEEEEEEccccEEEEEEcccccccEEcccHHccccccccc
MADQNGLETKVSAAlncidlsdpdIQKSAASLKQACMDSGFFYVINHGISKEFMDEVFAQSKkffelpfdEKMKLWVERNrgykqplknqffdqetnqqahgeayslvgpeteddldpekplcgpnvwpsadvlpgwKETMLRYQQEALNLGRKIGRIIALALdldvdffgkpeilgnampyvsfnhygvqdadpskeyilgtpahsdpslitllatdevpglqicrnihanprvwenvvplkdAFIVNIGDMLERMsncvfrstmhrvlfRQERYTIAYfvypsndamiecfptckseekppk
MADQNGLETKVSAALNCIDLSDPDIQKSAASLKQACMDSGFFYVINHGISKEFMDEVFAQSKKFFELPFDEKMKLWVERNRGYKQPLKNQFFDQETNQQAHGEAYSLVGPETEDDLDPEKPLCGPNVWPSADVLPGWKETMLRYQQEALNLGRKIGRIIALALDLDVDFFGKPEILGNAMPYVSFNHYGVQDADPSKEYILGTPAHSDPSLITLLATDEVPGLQICRNIHanprvwenvvPLKDAFIVNIGDMLERMSNCVFRSTMHRVLFRQERYTIAYFVYPSNDAMIECFptckseekppk
MADQNGLETKVSAALNCIDLSDPDIQKSAASLKQACMDSGFFYVINHGISKEFMDEVFAQSKKFFELPFDEKMKLWVERNRGYKQPLKNQFFDQETNQQAHGEAYSLVGPETEDDLDPEKPLCGPNVWPSADVLPGWKETMLRYQQEALNLGRKIGRIIALALDLDVDFFGKPEILGNAMPYVSFNHYGVQDADPSKEYILGTPAHSDPSLITLLATDEVPGLQICRNIHANPRVWENVVPLKDAFIVNIGDMLERMSNCVFRSTMHRVLFRQERYTIAYFVYPSNDAMIECFPTCKSEEKPPK
*************ALNCIDL*********ASLKQACMDSGFFYVINHGISKEFMDEVFAQSKKFFELPFDEKMKLWVERNRGYKQ************************************LCGPNVWPSADVLPGWKETMLRYQQEALNLGRKIGRIIALALDLDVDFFGKPEILGNAMPYVSFNHYGVQDADPSKEYILGTPAHSDPSLITLLATDEVPGLQICRNIHANPRVWENVVPLKDAFIVNIGDMLERMSNCVFRSTMHRVLFRQERYTIAYFVYPSNDAMIECFPTC********
**************LNCIDLSDPDIQKSAASLKQACMDSGFFYVINHGISKEFMDEVFAQSKKFFELPFDEKMKLWVERNRGYK***************AHGEAYSLVGPETEDDLDPEKPLCGPNVWPSADVLPGWKETMLRYQQEALNLGRKIGRIIALALDLDVDFFGKPEILGNAMPYVSFNHYGVQDADPSKEYILGTPAHSDPSLITLLATDEVPGLQICRNIHANPRVWENVVPLKDAFIVNIGDMLERMSNCVFRSTMHRVLFRQERYTIAYFVYPSNDAMIECFPTC********
********TKVSAALNCIDLSDPDIQKSAASLKQACMDSGFFYVINHGISKEFMDEVFAQSKKFFELPFDEKMKLWVERNRGYKQPLKNQFFDQETNQQAHGEAYSLVGPETEDDLDPEKPLCGPNVWPSADVLPGWKETMLRYQQEALNLGRKIGRIIALALDLDVDFFGKPEILGNAMPYVSFNHYGVQDADPSKEYILGTPAHSDPSLITLLATDEVPGLQICRNIHANPRVWENVVPLKDAFIVNIGDMLERMSNCVFRSTMHRVLFRQERYTIAYFVYPSNDAMIECFPT*********
*****GLETKVSAALNCIDLSDPDIQKSAASLKQACMDSGFFYVINHGISKEFMDEVFAQSKKFFELPFDEKMKLWVERNRGYKQPLKNQFFDQETNQQAHGEAYSLVGPETEDDLDPEKPLCGPNVWPSADVLPGWKETMLRYQQEALNLGRKIGRIIALALDLDVDFFGKPEILGNAMPYVSFNHYGVQDADPSKEYILGTPAHSDPSLITLLATDEVPGLQICRNIHANPRVWENVVPLKDAFIVNIGDMLERMSNCVFRSTMHRVLFRQERYTIAYFVYPSNDAMIECFPTCKS******
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MADQNGLETKVSAALNCIDLSDPDIQKSAASLKQACMDSGFFYVINHGISKEFMDEVFAQSKKFFELPFDEKMKLWVERNRGYKQPLKNQFFDQETNQQAHGEAYSLVGPETEDDLDPEKPLCGPNVWPSADVLPGWKETMLRYQQEALNLGRKIGRIIALALDLDVDFFGKPEILGNAMPYVSFNHYGVQDADPSKEYILGTPAHSDPSLITLLATDEVPGLQICRNIHANPRVWENVVPLKDAFIVNIGDMLERMSNCVFRSTMHRVLFRQERYTIAYFVYPSNDAMIECFPTCKSEEKPPK
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query304 2.2.26 [Sep-21-2011]
Q54RA4363 Probable iron/ascorbate o no no 0.799 0.669 0.309 1e-24
Q40062339 2'-deoxymugineic-acid 2'- N/A no 0.881 0.790 0.291 2e-23
D4N502360 Codeine O-demethylase OS= N/A no 0.746 0.630 0.317 4e-23
O04274362 Leucoanthocyanidin dioxyg N/A no 0.888 0.745 0.291 4e-23
A6BM06368 1-aminocyclopropane-1-car N/A no 0.878 0.725 0.286 5e-23
Q76NT9368 1-aminocyclopropane-1-car no no 0.878 0.725 0.286 5e-23
P51091357 Leucoanthocyanidin dioxyg N/A no 0.842 0.717 0.283 7e-23
Q96330336 Flavonol synthase/flavano no no 0.881 0.797 0.284 7e-23
P40902397 Sexual differentiation pr yes no 0.825 0.632 0.265 3e-21
Q9LHN8361 Feruloyl CoA ortho-hydrox no no 0.901 0.759 0.262 5e-21
>sp|Q54RA4|Y3291_DICDI Probable iron/ascorbate oxidoreductase DDB_G0283291 OS=Dictyostelium discoideum GN=DDB_G0283291 PE=3 SV=1 Back     alignment and function desciption
 Score =  114 bits (284), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 85/275 (30%), Positives = 136/275 (49%), Gaps = 32/275 (11%)

Query: 29  AASLKQACMDSGFFYVINHGISKEFMDEVFAQSKKFFELPFDEKMKLWVERNRGYKQPLK 88
           +  ++ AC + GFFY+  HGI +E +D +   SKKFF L    KMK  +E      Q   
Sbjct: 35  SKEIENACKNFGFFYIKGHGIDQELIDRLERLSKKFFSLDQSIKMKYRME----LAQKAW 90

Query: 89  NQFF---DQETNQQAHGEAYSLVGPETEDD---LDPEKPLCGPNVWPSADV-----LPGW 137
             +F    + T+     +    +G E  DD   +  + PL G N++P+ +      + G+
Sbjct: 91  RGYFVVGGELTSGLKDWKEGLYLGTELNDDHPLVIAQTPLHGLNLFPTLEEEIEYDIVGF 150

Query: 138 KETMLRYQQEALNLGRKIGRIIALALDLDVDFFGK-----PEILGNAMPYVSF------N 186
           K+T+L Y  +   LG  +  +IA++L+L  D+F       P IL     Y S       N
Sbjct: 151 KDTILTYIDKVTKLGHSLMELIAISLNLSADYFSSRYTKDPLILYRIFNYPSIISSGDDN 210

Query: 187 HYGVQDADPSKEYILGTPAHSDPSLITLLATDEVPGLQICRNIHANPRVWENVVPLKDAF 246
               + +D + +   G   H+D  ++T+L  D+V GLQ+      +   W +  P+K  F
Sbjct: 211 KTTGESSDDNDKVEWGVGEHTDYGVLTILYQDDVGGLQV-----HSKNGWISAPPIKGTF 265

Query: 247 IVNIGDMLERMSNCVFRSTMHRV-LFRQERYTIAY 280
           + NIGDML+RM+  ++RST HRV L R  R  I++
Sbjct: 266 VCNIGDMLDRMTGGLYRSTPHRVELNRSGRDRISF 300

Dictyostelium discoideum (taxid: 44689)
EC: 1EC: .EC: 1EC: 4EC: .EC: -EC: .EC: -
>sp|Q40062|IDS3_HORVU 2'-deoxymugineic-acid 2'-dioxygenase OS=Hordeum vulgare GN=IDS3 PE=1 SV=3 Back     alignment and function description
>sp|D4N502|DIOX3_PAPSO Codeine O-demethylase OS=Papaver somniferum GN=CODM PE=1 SV=1 Back     alignment and function description
>sp|O04274|LDOX_PERFR Leucoanthocyanidin dioxygenase OS=Perilla frutescens GN=ANS PE=2 SV=1 Back     alignment and function description
>sp|A6BM06|ACCO1_DICMU 1-aminocyclopropane-1-carboxylate oxidase OS=Dictyostelium mucoroides GN=aco PE=3 SV=1 Back     alignment and function description
>sp|Q76NT9|ACCO1_DICDI 1-aminocyclopropane-1-carboxylate oxidase OS=Dictyostelium discoideum GN=aco PE=2 SV=1 Back     alignment and function description
>sp|P51091|LDOX_MALDO Leucoanthocyanidin dioxygenase OS=Malus domestica GN=ANS PE=2 SV=1 Back     alignment and function description
>sp|Q96330|FLS1_ARATH Flavonol synthase/flavanone 3-hydroxylase OS=Arabidopsis thaliana GN=FLS1 PE=1 SV=1 Back     alignment and function description
>sp|P40902|ISP7_SCHPO Sexual differentiation process protein isp7 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=isp7 PE=2 SV=1 Back     alignment and function description
>sp|Q9LHN8|F6H1_ARATH Feruloyl CoA ortho-hydroxylase 1 OS=Arabidopsis thaliana GN=F6'H1 PE=1 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query304
255546339340 Hyoscyamine 6-dioxygenase, putative [Ric 0.980 0.876 0.570 2e-92
356495885331 PREDICTED: probable iron/ascorbate oxido 0.947 0.870 0.585 2e-92
224143624336 predicted protein [Populus trichocarpa] 0.970 0.877 0.574 3e-92
225445104358 PREDICTED: probable iron/ascorbate oxido 0.953 0.810 0.589 1e-91
297738763330 unnamed protein product [Vitis vinifera] 0.953 0.878 0.589 2e-91
255636224331 unknown [Glycine max] 0.947 0.870 0.582 2e-91
223944829329 unknown [Zea mays] gi|413947624|gb|AFW80 0.973 0.899 0.566 2e-90
388522983340 unknown [Medicago truncatula] 0.947 0.847 0.572 7e-90
357125936334 PREDICTED: probable iron/ascorbate oxido 0.957 0.871 0.571 8e-90
225445102364 PREDICTED: probable iron/ascorbate oxido 0.953 0.796 0.578 1e-89
>gi|255546339|ref|XP_002514229.1| Hyoscyamine 6-dioxygenase, putative [Ricinus communis] gi|223546685|gb|EEF48183.1| Hyoscyamine 6-dioxygenase, putative [Ricinus communis] Back     alignment and taxonomy information
 Score =  345 bits (885), Expect = 2e-92,   Method: Compositional matrix adjust.
 Identities = 175/307 (57%), Positives = 224/307 (72%), Gaps = 9/307 (2%)

Query: 3   DQNGLETKVSAALNCIDLSDPDIQKSAASLKQACMDSGFFYVINHGISKEFMDEVFAQSK 62
           +++G   +  + LN IDLS  DI +S + LKQAC+D GFFYVINHGIS+EFM+EVF +SK
Sbjct: 9   NRDGALNEKISFLNRIDLSSSDIHQSVSLLKQACLDCGFFYVINHGISEEFMEEVFKESK 68

Query: 63  KFFELPFDEKMK-LWVERNRGYKQPLKNQFFDQETNQQAHG---EAYSLVGPETEDDLDP 118
           KFFELP  EKMK L  E++RGY  P+ ++  D   + Q HG   E Y +     EDD + 
Sbjct: 69  KFFELPESEKMKVLRNEKHRGY-TPVLDELLD--PDNQVHGDYKEGYYIGVEVPEDDPEA 125

Query: 119 EKPLCGPNVWPSADVLPGWKETMLRYQQEALNLGRKIGRIIALALDLDVDFFGKPEILGN 178
           +KP  GPNVWP  D+LPGW++TM R+ QEAL + RKI RIIALALDLD +FF +PE+LG 
Sbjct: 126 DKPFYGPNVWPKPDLLPGWRQTMERFHQEALEVARKIARIIALALDLDANFFDRPEMLGQ 185

Query: 179 AMPYVSFNHYGVQDADPSKEYILGTPAHSDPSLITLLATDEVPGLQICRNIHANPRVWEN 238
            +  +   HYG   +DP K  + G  AHSD  LITLLATD+VPGLQIC++  + P+VWEN
Sbjct: 186 PIAVMRLLHYGAYVSDPLKG-LFGAGAHSDYGLITLLATDDVPGLQICKDKDSRPQVWEN 244

Query: 239 VVPLKDAFIVNIGDMLERMSNCVFRSTMHRVLFR-QERYTIAYFVYPSNDAMIECFPTCK 297
           + PLK AFIVN+GDMLER SNC+FRST+HRV+   QERY+IAYFV PS++ ++EC PTCK
Sbjct: 245 IAPLKGAFIVNLGDMLERWSNCIFRSTLHRVVGNGQERYSIAYFVEPSHECLVECLPTCK 304

Query: 298 SEEKPPK 304
           SE+ PP+
Sbjct: 305 SEKNPPR 311

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|356495885|ref|XP_003516801.1| PREDICTED: probable iron/ascorbate oxidoreductase DDB_G0283291-like [Glycine max] Back     alignment and taxonomy information
>gi|224143624|ref|XP_002325020.1| predicted protein [Populus trichocarpa] gi|222866454|gb|EEF03585.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|225445104|ref|XP_002283713.1| PREDICTED: probable iron/ascorbate oxidoreductase DDB_G0283291-like isoform 2 [Vitis vinifera] Back     alignment and taxonomy information
>gi|297738763|emb|CBI28008.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|255636224|gb|ACU18453.1| unknown [Glycine max] Back     alignment and taxonomy information
>gi|223944829|gb|ACN26498.1| unknown [Zea mays] gi|413947624|gb|AFW80273.1| hypothetical protein ZEAMMB73_441487 [Zea mays] Back     alignment and taxonomy information
>gi|388522983|gb|AFK49553.1| unknown [Medicago truncatula] Back     alignment and taxonomy information
>gi|357125936|ref|XP_003564645.1| PREDICTED: probable iron/ascorbate oxidoreductase DDB_G0283291-like [Brachypodium distachyon] Back     alignment and taxonomy information
>gi|225445102|ref|XP_002283708.1| PREDICTED: probable iron/ascorbate oxidoreductase DDB_G0283291-like isoform 1 [Vitis vinifera] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query304
TAIR|locus:2203325329 AT1G35190 [Arabidopsis thalian 0.967 0.893 0.543 8.7e-79
TAIR|locus:2075125330 AT3G46490 [Arabidopsis thalian 0.957 0.881 0.513 1.7e-73
TAIR|locus:2075130251 AT3G46500 [Arabidopsis thalian 0.713 0.864 0.467 1.5e-51
TAIR|locus:2078241286 AT3G46480 [Arabidopsis thalian 0.684 0.727 0.460 5.4e-51
TAIR|locus:504955434247 AT4G16765 [Arabidopsis thalian 0.588 0.724 0.464 5.3e-40
ASPGD|ASPL0000015471335 AN3672 [Emericella nidulans (t 0.898 0.814 0.320 4.1e-33
ASPGD|ASPL0000035942349 AN11188 [Emericella nidulans ( 0.871 0.759 0.325 2e-31
TAIR|locus:2074800332 AT3G50210 [Arabidopsis thalian 0.904 0.828 0.322 3e-30
TAIR|locus:2114683357 DIN11 "DARK INDUCIBLE 11" [Ara 0.878 0.747 0.321 2.7e-29
TIGR_CMR|SPO_2669317 SPO_2669 "oxidoreductase, 2OG- 0.871 0.835 0.341 1.3e-27
TAIR|locus:2203325 AT1G35190 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 792 (283.9 bits), Expect = 8.7e-79, P = 8.7e-79
 Identities = 167/307 (54%), Positives = 213/307 (69%)

Query:     4 QNGLETKVSAALNCIDLSDPDIQKSAASLKQACMDSGFFYVINHGISKEFMDEVFAQSKK 63
             +N    KVS+ LNCIDL++ D+  S  SLKQAC+D GFFYVINHGIS+EFMD+VF QSKK
Sbjct:     2 ENHTTMKVSS-LNCIDLANDDLNHSVVSLKQACLDCGFFYVINHGISEEFMDDVFEQSKK 60

Query:    64 FFELPFDEKMK-LWVERNRGYKQPLKNQFFDQETNQQA-HGEAYSLVGPETEDDLDP--E 119
              F LP +EKMK L  E++RGY  P+ ++  D +      H E Y  +G E   D DP  +
Sbjct:    61 LFALPLEEKMKVLRNEKHRGYT-PVLDELLDPKNQINGDHKEGY-YIGIEVPKD-DPHWD 117

Query:   120 KPLCGPNVWPSADVLPGWKETMLRYQQEALNLGRKIGRIIALALDLDVDFFGKPEILGNA 179
             KP  GPN WP ADVLPGW+ETM +Y QEAL +   I R++ALALDLDV +F + E+LG  
Sbjct:   118 KPFYGPNPWPDADVLPGWRETMEKYHQEALRVSMAIARLLALALDLDVGYFDRTEMLGKP 177

Query:   180 MPYVSFNHY-GVQDADPSKEYILGTPAHSDPSLITLLATDEVPGLQICRNIHANPRVWEN 238
             +  +    Y G+  +DPSK  I    AHSD  ++TLLATD V GLQIC++ +A P+ WE 
Sbjct:   178 IATMRLLRYQGI--SDPSKG-IYACGAHSDFGMMTLLATDGVMGLQICKDKNAMPQKWEY 234

Query:   239 VVPLKDAFIVNIGDMLERMSNCVFRSTMHRVLFR-QERYTIAYFVYPSNDAMIECFPTCK 297
             V P+K AFIVN+GDMLER SN  F+ST+HRVL   QERY+I +FV P++D ++EC PTCK
Sbjct:   235 VPPIKGAFIVNLGDMLERWSNGFFKSTLHRVLGNGQERYSIPFFVEPNHDCLVECLPTCK 294

Query:   298 SEEKPPK 304
             SE + PK
Sbjct:   295 SESELPK 301
GO:0005506 "iron ion binding" evidence=IEA
GO:0005737 "cytoplasm" evidence=ISM
GO:0009821 "alkaloid biosynthetic process" evidence=ISS
GO:0016491 "oxidoreductase activity" evidence=IEA
GO:0016706 "oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors" evidence=IEA;ISS
GO:0055114 "oxidation-reduction process" evidence=IEA
TAIR|locus:2075125 AT3G46490 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2075130 AT3G46500 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2078241 AT3G46480 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:504955434 AT4G16765 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
ASPGD|ASPL0000015471 AN3672 [Emericella nidulans (taxid:162425)] Back     alignment and assigned GO terms
ASPGD|ASPL0000035942 AN11188 [Emericella nidulans (taxid:162425)] Back     alignment and assigned GO terms
TAIR|locus:2074800 AT3G50210 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2114683 DIN11 "DARK INDUCIBLE 11" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TIGR_CMR|SPO_2669 SPO_2669 "oxidoreductase, 2OG-Fe(II) oxygenase family" [Ruegeria pomeroyi DSS-3 (taxid:246200)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer1.14.110.691
4th Layer1.14.11.4LOW CONFIDENCE prediction!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query304
PLN03002332 PLN03002, PLN03002, oxidoreductase, 2OG-Fe(II) oxy 1e-101
COG3491322 COG3491, PcbC, Isopenicillin N synthase and relate 7e-59
PTZ00273320 PTZ00273, PTZ00273, oxidase reductase; Provisional 9e-52
PLN02485329 PLN02485, PLN02485, oxidoreductase 1e-47
PLN02639337 PLN02639, PLN02639, oxidoreductase, 2OG-Fe(II) oxy 5e-38
PLN02393362 PLN02393, PLN02393, leucoanthocyanidin dioxygenase 6e-35
PLN02254358 PLN02254, PLN02254, gibberellin 3-beta-dioxygenase 7e-32
PLN02758361 PLN02758, PLN02758, oxidoreductase, 2OG-Fe(II) oxy 7e-32
PLN02750345 PLN02750, PLN02750, oxidoreductase, 2OG-Fe(II) oxy 3e-29
PLN02704335 PLN02704, PLN02704, flavonol synthase 5e-28
pfam14226113 pfam14226, DIOX_N, non-haem dioxygenase in morphin 6e-28
PLN03178360 PLN03178, PLN03178, leucoanthocyanidin dioxygenase 2e-27
PLN02947374 PLN02947, PLN02947, oxidoreductase 7e-27
PLN02984341 PLN02984, PLN02984, oxidoreductase, 2OG-Fe(II) oxy 1e-25
PLN02912348 PLN02912, PLN02912, oxidoreductase, 2OG-Fe(II) oxy 3e-25
PLN00417348 PLN00417, PLN00417, oxidoreductase, 2OG-Fe(II) oxy 3e-23
PLN02997325 PLN02997, PLN02997, flavonol synthase 4e-23
PLN02216357 PLN02216, PLN02216, protein SRG1 5e-23
PLN02403303 PLN02403, PLN02403, aminocyclopropanecarboxylate o 3e-22
PLN02515358 PLN02515, PLN02515, naringenin,2-oxoglutarate 3-di 1e-21
pfam0317196 pfam03171, 2OG-FeII_Oxy, 2OG-Fe(II) oxygenase supe 3e-21
PLN02904357 PLN02904, PLN02904, oxidoreductase 4e-20
PLN02299321 PLN02299, PLN02299, 1-aminocyclopropane-1-carboxyl 4e-20
PLN02156335 PLN02156, PLN02156, gibberellin 2-beta-dioxygenase 1e-19
PLN02365300 PLN02365, PLN02365, 2-oxoglutarate-dependent dioxy 4e-16
PLN02276361 PLN02276, PLN02276, gibberellin 20-oxidase 4e-15
PLN03001262 PLN03001, PLN03001, oxidoreductase, 2OG-Fe(II) oxy 3e-13
PLN02276361 PLN02276, PLN02276, gibberellin 20-oxidase 7e-07
PLN03176120 PLN03176, PLN03176, flavanone-3-hydroxylase; Provi 5e-04
>gnl|CDD|178579 PLN03002, PLN03002, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information 
 Score =  300 bits (768), Expect = e-101
 Identities = 161/307 (52%), Positives = 208/307 (67%), Gaps = 6/307 (1%)

Query: 1   MADQNGLETKVSAALNCIDLSDPDIQKSAASLKQACMDSGFFYVINHGISKEFMDEVFAQ 60
           M +     T   ++LNCIDL++ D+  S ASLKQAC+D GFFYVINHGI++EFMD+VF Q
Sbjct: 1   MENHTKDSTMKVSSLNCIDLANDDLNHSVASLKQACLDCGFFYVINHGINEEFMDDVFEQ 60

Query: 61  SKKFFELPFDEKMK-LWVERNRGYKQPLKNQFFDQETNQQAHGEAYSLVGPETEDDLDPE 119
           SKKFF LP +EKMK L  E++RGY   L  +   +      H E Y +     +DD   +
Sbjct: 61  SKKFFALPLEEKMKVLRNEKHRGYTPVLDEKLDPKNQINGDHKEGYYIGIEVPKDDPHWD 120

Query: 120 KPLCGPNVWPSADVLPGWKETMLRYQQEALNLGRKIGRIIALALDLDVDFFGKPEILGNA 179
           KP  GPN WP ADVLPGW+ETM +Y QEAL +   I +++ALALDLDV +F + E+LG  
Sbjct: 121 KPFYGPNPWPDADVLPGWRETMEKYHQEALRVSMAIAKLLALALDLDVGYFDRTEMLGKP 180

Query: 180 MPYVSFNHY-GVQDADPSKEYILGTPAHSDPSLITLLATDEVPGLQICRNIHANPRVWEN 238
           +  +    Y G+  +DPSK  I    AHSD  ++TLLATD V GLQIC++ +A P+ WE 
Sbjct: 181 IATMRLLRYQGI--SDPSKG-IYACGAHSDFGMMTLLATDGVMGLQICKDKNAMPQKWEY 237

Query: 239 VVPLKDAFIVNIGDMLERMSNCVFRSTMHRVLFR-QERYTIAYFVYPSNDAMIECFPTCK 297
           V P+K AFIVN+GDMLER SN  F+ST+HRVL   QERY+I +FV P++D ++EC PTCK
Sbjct: 238 VPPIKGAFIVNLGDMLERWSNGFFKSTLHRVLGNGQERYSIPFFVEPNHDCLVECLPTCK 297

Query: 298 SEEKPPK 304
           SE   PK
Sbjct: 298 SESDLPK 304

Length = 332
>gnl|CDD|226022 COG3491, PcbC, Isopenicillin N synthase and related dioxygenases [General function prediction only] Back     alignment and domain information
>gnl|CDD|140299 PTZ00273, PTZ00273, oxidase reductase; Provisional Back     alignment and domain information
>gnl|CDD|215267 PLN02485, PLN02485, oxidoreductase Back     alignment and domain information
>gnl|CDD|178245 PLN02639, PLN02639, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|215220 PLN02393, PLN02393, leucoanthocyanidin dioxygenase like protein Back     alignment and domain information
>gnl|CDD|215142 PLN02254, PLN02254, gibberellin 3-beta-dioxygenase Back     alignment and domain information
>gnl|CDD|215404 PLN02758, PLN02758, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|178351 PLN02750, PLN02750, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|166345 PLN02704, PLN02704, flavonol synthase Back     alignment and domain information
>gnl|CDD|222608 pfam14226, DIOX_N, non-haem dioxygenase in morphine synthesis N-terminal Back     alignment and domain information
>gnl|CDD|215614 PLN03178, PLN03178, leucoanthocyanidin dioxygenase; Provisional Back     alignment and domain information
>gnl|CDD|215510 PLN02947, PLN02947, oxidoreductase Back     alignment and domain information
>gnl|CDD|215534 PLN02984, PLN02984, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|178500 PLN02912, PLN02912, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|177810 PLN00417, PLN00417, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|178576 PLN02997, PLN02997, flavonol synthase Back     alignment and domain information
>gnl|CDD|215129 PLN02216, PLN02216, protein SRG1 Back     alignment and domain information
>gnl|CDD|178025 PLN02403, PLN02403, aminocyclopropanecarboxylate oxidase Back     alignment and domain information
>gnl|CDD|178130 PLN02515, PLN02515, naringenin,2-oxoglutarate 3-dioxygenase Back     alignment and domain information
>gnl|CDD|217403 pfam03171, 2OG-FeII_Oxy, 2OG-Fe(II) oxygenase superfamily Back     alignment and domain information
>gnl|CDD|178492 PLN02904, PLN02904, oxidoreductase Back     alignment and domain information
>gnl|CDD|215168 PLN02299, PLN02299, 1-aminocyclopropane-1-carboxylate oxidase Back     alignment and domain information
>gnl|CDD|177816 PLN02156, PLN02156, gibberellin 2-beta-dioxygenase Back     alignment and domain information
>gnl|CDD|177993 PLN02365, PLN02365, 2-oxoglutarate-dependent dioxygenase Back     alignment and domain information
>gnl|CDD|215156 PLN02276, PLN02276, gibberellin 20-oxidase Back     alignment and domain information
>gnl|CDD|166642 PLN03001, PLN03001, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|215156 PLN02276, PLN02276, gibberellin 20-oxidase Back     alignment and domain information
>gnl|CDD|178720 PLN03176, PLN03176, flavanone-3-hydroxylase; Provisional Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 304
PLN03002332 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PTZ00273320 oxidase reductase; Provisional 100.0
COG3491322 PcbC Isopenicillin N synthase and related dioxygen 100.0
PLN02254358 gibberellin 3-beta-dioxygenase 100.0
PLN02997325 flavonol synthase 100.0
PLN02750345 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN02485329 oxidoreductase 100.0
PLN02276361 gibberellin 20-oxidase 100.0
PLN02515358 naringenin,2-oxoglutarate 3-dioxygenase 100.0
PLN02216357 protein SRG1 100.0
PLN02758361 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN02639337 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN02156335 gibberellin 2-beta-dioxygenase 100.0
PLN02704335 flavonol synthase 100.0
PLN00417348 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN02912348 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN02904357 oxidoreductase 100.0
PLN03178360 leucoanthocyanidin dioxygenase; Provisional 100.0
PLN02393362 leucoanthocyanidin dioxygenase like protein 100.0
PLN02947374 oxidoreductase 100.0
PLN02299321 1-aminocyclopropane-1-carboxylate oxidase 100.0
PLN02365300 2-oxoglutarate-dependent dioxygenase 100.0
KOG0143322 consensus Iron/ascorbate family oxidoreductases [S 100.0
PLN02403303 aminocyclopropanecarboxylate oxidase 100.0
PLN02984341 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN03001262 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PF14226116 DIOX_N: non-haem dioxygenase in morphine synthesis 99.92
PF0317198 2OG-FeII_Oxy: 2OG-Fe(II) oxygenase superfamily Ent 99.91
PLN03176120 flavanone-3-hydroxylase; Provisional 99.75
PF13640100 2OG-FeII_Oxy_3: 2OG-Fe(II) oxygenase superfamily; 96.45
PRK05467226 Fe(II)-dependent oxygenase superfamily protein; Pr 95.28
PF12851171 Tet_JBP: Oxygenase domain of the 2OGFeDO superfami 95.18
smart00702178 P4Hc Prolyl 4-hydroxylase alpha subunit homologues 94.68
PRK15401213 alpha-ketoglutarate-dependent dioxygenase AlkB; Pr 93.39
PF13532194 2OG-FeII_Oxy_2: 2OG-Fe(II) oxygenase superfamily; 88.8
TIGR02466201 conserved hypothetical protein. This family consis 87.73
PRK08130213 putative aldolase; Validated 82.69
PRK08333184 L-fuculose phosphate aldolase; Provisional 82.61
>PLN03002 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information 
Probab=100.00  E-value=8.6e-74  Score=521.47  Aligned_cols=289  Identities=54%  Similarity=0.932  Sum_probs=248.1

Q ss_pred             CCCCceeeCCCcchHHHHHHHHHHHHhcceEEEEecCCChHHHHHHHHHHHHHhcCCHHHHhhhhhc-CCCCcccCCccc
Q 022020           12 SAALNCIDLSDPDIQKSAASLKQACMDSGFFYVINHGISKEFMDEVFAQSKKFFELPFDEKMKLWVE-RNRGYKQPLKNQ   90 (304)
Q Consensus        12 ~~~iPvIDl~~~~~~~~~~~l~~A~~~~Gff~l~nhGi~~~~~~~~~~~~~~fF~lp~e~K~~~~~~-~~~GY~~~~~e~   90 (304)
                      ..+||+|||+...+..++++|.+||+++|||||+||||+.++++++++.+++||+||.|+|+++... .++||.+.+.+ 
T Consensus        12 ~~~iP~IDl~~~~~~~~~~~l~~Ac~~~GFf~l~nHGI~~~l~~~~~~~~~~FF~LP~e~K~k~~~~~~~~GY~~~~~e-   90 (332)
T PLN03002         12 VSSLNCIDLANDDLNHSVASLKQACLDCGFFYVINHGINEEFMDDVFEQSKKFFALPLEEKMKVLRNEKHRGYTPVLDE-   90 (332)
T ss_pred             CCCCCEEeCCchhHHHHHHHHHHHHHhCCEEEEeCCCCCHHHHHHHHHHHHHHHcCCHHHHHhhccCCCCCCcCccccc-
Confidence            4589999998766777899999999999999999999999999999999999999999999999766 78999988776 


Q ss_pred             ccccccccCccc-chhhhcCCC-CCCCCCCCCCCCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCc
Q 022020           91 FFDQETNQQAHG-EAYSLVGPE-TEDDLDPEKPLCGPNVWPSADVLPGWKETMLRYQQEALNLGRKIGRIIALALDLDVD  168 (304)
Q Consensus        91 ~~~~~~~~~~d~-E~~~~~~~~-~~~~~~~~~~~~~~n~wP~~~~~~~f~~~~~~y~~~~~~la~~ll~~l~~~Lgl~~~  168 (304)
                      ..+.......|+ |.|. ++.+ |.+++.......++|.||+.+.+|+||+++++|+++|.+|+..||++|+++||++++
T Consensus        91 ~~~~~~~~~~d~kE~f~-~~~~~p~~~~~~~~~~~~~n~wP~~~~~p~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~  169 (332)
T PLN03002         91 KLDPKNQINGDHKEGYY-IGIEVPKDDPHWDKPFYGPNPWPDADVLPGWRETMEKYHQEALRVSMAIAKLLALALDLDVG  169 (332)
T ss_pred             ccccccCCCCcceeeeE-ecccCCCCCccccccccCCCCCcCCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChH
Confidence            443221123688 9998 8765 444332222345789999864578999999999999999999999999999999999


Q ss_pred             ccCCCcccCCCcceEEEEecCCCCCCCCcccccccccccCCCceeEEeeCCCCceeEEeCCCCCCCceEEccCCCCeEEE
Q 022020          169 FFGKPEILGNAMPYVSFNHYGVQDADPSKEYILGTPAHSDPSLITLLATDEVPGLQICRNIHANPRVWENVVPLKDAFIV  248 (304)
Q Consensus       169 ~~~~~~~~~~~~~~lr~~~Yp~~~~~~~~~~~~~~~~HtD~~~lTll~~d~~~GLqv~~~~~~~~~~W~~v~~~~g~~iV  248 (304)
                      +|.+...+..+.+.||++|||+++.. .. ..+|+++|||+|+||||+||+++||||+.++...+|+|++|+|+||++||
T Consensus       170 ~f~~~~~~~~~~~~lrl~~YP~~~~~-~~-~~~g~~~HTD~g~lTlL~qd~v~GLQV~~~~~~~~g~Wi~Vpp~pg~~VV  247 (332)
T PLN03002        170 YFDRTEMLGKPIATMRLLRYQGISDP-SK-GIYACGAHSDFGMMTLLATDGVMGLQICKDKNAMPQKWEYVPPIKGAFIV  247 (332)
T ss_pred             HhccccccCCCchheeeeeCCCCCCc-cc-CccccccccCCCeEEEEeeCCCCceEEecCCCCCCCcEEECCCCCCeEEE
Confidence            99832245666789999999998753 22 57999999999999999999999999987642123789999999999999


Q ss_pred             EcchhHHHHhCCcccccccccC-CCCceeEEEeeecCCCCceeecCCCCCCCCCCCC
Q 022020          249 NIGDMLERMSNCVFRSTMHRVL-FRQERYTIAYFVYPSNDAMIECFPTCKSEEKPPK  304 (304)
Q Consensus       249 n~Gd~l~~~T~G~~~s~~HRV~-~~~~R~S~~~f~~p~~d~~i~p~~~~~~~~~p~~  304 (304)
                      |+||+|++||||+|+|++|||+ ++.+|||++||+.|+.|++|.|+++|+++++|++
T Consensus       248 NiGD~L~~wTng~~kSt~HRVv~~~~~R~Sia~F~~p~~d~~i~pl~~~~~~~~p~~  304 (332)
T PLN03002        248 NLGDMLERWSNGFFKSTLHRVLGNGQERYSIPFFVEPNHDCLVECLPTCKSESDLPK  304 (332)
T ss_pred             EHHHHHHHHhCCeeECcCCeecCCCCCeeEEEEEecCCCCeeEecCCcccCCCCccc
Confidence            9999999999999999999999 8789999999999999999999999999988864

>PTZ00273 oxidase reductase; Provisional Back     alignment and domain information
>COG3491 PcbC Isopenicillin N synthase and related dioxygenases [General function prediction only] Back     alignment and domain information
>PLN02254 gibberellin 3-beta-dioxygenase Back     alignment and domain information
>PLN02997 flavonol synthase Back     alignment and domain information
>PLN02750 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN02485 oxidoreductase Back     alignment and domain information
>PLN02276 gibberellin 20-oxidase Back     alignment and domain information
>PLN02515 naringenin,2-oxoglutarate 3-dioxygenase Back     alignment and domain information
>PLN02216 protein SRG1 Back     alignment and domain information
>PLN02758 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN02639 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN02156 gibberellin 2-beta-dioxygenase Back     alignment and domain information
>PLN02704 flavonol synthase Back     alignment and domain information
>PLN00417 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN02912 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN02904 oxidoreductase Back     alignment and domain information
>PLN03178 leucoanthocyanidin dioxygenase; Provisional Back     alignment and domain information
>PLN02393 leucoanthocyanidin dioxygenase like protein Back     alignment and domain information
>PLN02947 oxidoreductase Back     alignment and domain information
>PLN02299 1-aminocyclopropane-1-carboxylate oxidase Back     alignment and domain information
>PLN02365 2-oxoglutarate-dependent dioxygenase Back     alignment and domain information
>KOG0143 consensus Iron/ascorbate family oxidoreductases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only] Back     alignment and domain information
>PLN02403 aminocyclopropanecarboxylate oxidase Back     alignment and domain information
>PLN02984 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN03001 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PF14226 DIOX_N: non-haem dioxygenase in morphine synthesis N-terminal; PDB: 3OOX_A 1BK0_A 1IPS_B 1QIQ_A 1OC1_A 2Y86_A 2Y60_A 1W03_A 2VE1_A 1QJF_A Back     alignment and domain information
>PF03171 2OG-FeII_Oxy: 2OG-Fe(II) oxygenase superfamily Entry for Lysyl hydrolases This Prosite entry is a sub-family of the Pfam entry; InterPro: IPR005123 This domain is found in members of the 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily [], as well as the C-terminal of prolyl 4-hydroxylase alpha subunit Back     alignment and domain information
>PLN03176 flavanone-3-hydroxylase; Provisional Back     alignment and domain information
>PF13640 2OG-FeII_Oxy_3: 2OG-Fe(II) oxygenase superfamily; PDB: 3DKQ_B 3GZE_D 3HQR_A 2Y34_A 2G1M_A 2G19_A 3OUI_A 3OUJ_A 2HBU_A 2Y33_A Back     alignment and domain information
>PRK05467 Fe(II)-dependent oxygenase superfamily protein; Provisional Back     alignment and domain information
>PF12851 Tet_JBP: Oxygenase domain of the 2OGFeDO superfamily ; InterPro: IPR024779 TETs are 2OG- and Fe(II)-dependent oxygenases that catalyse the conversion of 5 methyl-Cytosine (5-MC) to 5-hydroxymethyl-cytosine (hmC) in cultured cells and in vitro [] Back     alignment and domain information
>smart00702 P4Hc Prolyl 4-hydroxylase alpha subunit homologues Back     alignment and domain information
>PRK15401 alpha-ketoglutarate-dependent dioxygenase AlkB; Provisional Back     alignment and domain information
>PF13532 2OG-FeII_Oxy_2: 2OG-Fe(II) oxygenase superfamily; PDB: 2IUW_A 3BTZ_A 3RZL_A 3RZH_A 3S5A_A 3RZG_A 3RZJ_A 3BUC_A 3H8X_A 3H8R_A Back     alignment and domain information
>TIGR02466 conserved hypothetical protein Back     alignment and domain information
>PRK08130 putative aldolase; Validated Back     alignment and domain information
>PRK08333 L-fuculose phosphate aldolase; Provisional Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query304
2brt_A355 Anthocyanidin Synthase From Arabidopsis Thaliana Co 2e-20
1gp5_A356 Anthocyanidin Synthase From Arabidopsis Thaliana Co 2e-20
1gp4_A356 Anthocyanidin Synthase From Arabidopsis Thaliana (S 3e-19
1ips_A331 Isopenicillin N Synthase From Aspergillus Nidulans 6e-15
2bjs_A325 Isopenicillin N Synthase C-Terminal Truncation Muta 6e-15
1w9y_A319 The Structure Of Acc Oxidase Length = 319 1e-13
3oox_A312 Crystal Structure Of A Putative 2og-Fe(Ii) Oxygenas 6e-13
3on7_A280 Crystal Structure Of A Putative Oxygenase (So_2589) 2e-08
>pdb|2BRT|A Chain A, Anthocyanidin Synthase From Arabidopsis Thaliana Complexed With Naringenin Length = 355 Back     alignment and structure 
Iteration: 1

 Score = 96.3 bits (238), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 82/297 (27%), Positives = 141/297 (47%), Gaps = 27/297 (9%)
Query: 15  LNCIDLSDPDIQKSA-ASLKQACMDSGFFYVINHGISKEFMDEVFAQSKKFFELPFDEKM 73
           L  I+  D  I+++    LK+A +D G  ++INHGI  + M+ V    ++FF L  +EK 
Sbjct: 51  LKNIESDDEKIRENCIEELKKASLDWGVMHLINHGIPADLMERVKKAGEEFFSLSVEEKE 110
Query: 74  KLWVERNRGYKQPLKNQFFDQETNQ-QAHGEAYSLVGPETEDDLDPEKPLCGPNVWPSAD 132
           K   ++  G  Q   ++  +  + Q +     + L  PE + DL         ++WP   
Sbjct: 111 KYANDQATGKIQGYGSKLANNASGQLEWEDYFFHLAYPEEKRDL---------SIWPKTP 161
Query: 133 VLPGWKETMLRYQQEALNLGRKIGRIIALALDLDVDFFGKPEILG--NAMPYVSFNHYGV 190
               + E    Y +    L  K+ + +++ L L+ D   K E+ G    +  +  N+Y  
Sbjct: 162 --SDYIEATSEYAKCLRLLATKVFKALSVGLGLEPDRLEK-EVGGLEELLLQMKINYY-- 216
Query: 191 QDADPSKEYILGTPAHSDPSLITLLATDEVPGLQICRNIHANPRVWENVVPLKDAFIVNI 250
               P  E  LG  AH+D S +T +  + VPGLQ+    +    V    VP  D+ +++I
Sbjct: 217 -PKCPQPELALGVEAHTDVSALTFILHNMVPGLQL---FYEGKWVTAKCVP--DSIVMHI 270
Query: 251 GDMLERMSNCVFRSTMHRVLFRQERYTIAYFVY---PSNDAMIECFPTCKSEEKPPK 304
           GD LE +SN  ++S +HR L  +E+  I++ V+   P +  +++  P   S E P K
Sbjct: 271 GDTLEILSNGKYKSILHRGLVNKEKVRISWAVFCEPPKDKIVLKPLPEMVSVESPAK 327
>pdb|1GP5|A Chain A, Anthocyanidin Synthase From Arabidopsis Thaliana Complexed With Trans-Dihydroquercetin Length = 356 Back     alignment and structure
>pdb|1GP4|A Chain A, Anthocyanidin Synthase From Arabidopsis Thaliana (Selenomethionine Substituted) Length = 356 Back     alignment and structure
>pdb|1IPS|A Chain A, Isopenicillin N Synthase From Aspergillus Nidulans (Manganese Complex) Length = 331 Back     alignment and structure
>pdb|2BJS|A Chain A, Isopenicillin N Synthase C-Terminal Truncation Mutant Length = 325 Back     alignment and structure
>pdb|1W9Y|A Chain A, The Structure Of Acc Oxidase Length = 319 Back     alignment and structure
>pdb|3OOX|A Chain A, Crystal Structure Of A Putative 2og-Fe(Ii) Oxygenase Family Protein (Cc_0200) From Caulobacter Crescentus At 1.44 A Resolution Length = 312 Back     alignment and structure
>pdb|3ON7|A Chain A, Crystal Structure Of A Putative Oxygenase (So_2589) From Shewanella Oneidensis At 2.20 A Resolution Length = 280 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query304
3oox_A312 Putative 2OG-Fe(II) oxygenase family protein; stru 1e-100
1odm_A331 Isopenicillin N synthase; antibiotic biosynthesis, 9e-98
1dcs_A311 Deacetoxycephalosporin C synthase; ferrous oxygena 2e-87
3on7_A280 Oxidoreductase, iron/ascorbate family; structural 4e-82
1w9y_A319 1-aminocyclopropane-1-carboxylate oxidase 1; oxyge 4e-62
1gp6_A356 Leucoanthocyanidin dioxygenase; 2-oxoglutarate dep 3e-61
>3oox_A Putative 2OG-Fe(II) oxygenase family protein; structural genomics, joint center for structural genomics; HET: MSE; 1.44A {Caulobacter crescentus CB15} Length = 312 Back     alignment and structure
 Score =  296 bits (759), Expect = e-100
 Identities = 74/306 (24%), Positives = 127/306 (41%), Gaps = 31/306 (10%)

Query: 12  SAALNCIDLSD--PDIQKSAASLKQACMDSGFFYVINHGISKEFMDEVFAQSKKFFELPF 69
           ++A++ +  S    D  + A  L  +    GF  + ++ + +  +D     +K FF LP 
Sbjct: 4   TSAIDPVSFSLYAKDFTRFAQELGASFERYGFAVLSDYDLDQARIDAAVDSAKAFFALPV 63

Query: 70  DEKMKLWVER--NRGYKQPLKNQFFDQETNQQAHG---EAYSLVGPETEDDLDPEKPLCG 124
           + K +    +   RGY       F  +      H    E +  +G +        +    
Sbjct: 64  ETKKQYAGVKGGARGY-----IPFGVETAKGADHYDLKEFWH-MGRDLPPG-HRFRAHMA 116

Query: 125 PNVWPSADVLPGWKETMLRYQQEALNLGRKIGRIIALALDLDVDFFGKPEILGNAMPYVS 184
            NVWP+   +P +K  +         +G K+   IA  L L+ DFF     + +    + 
Sbjct: 117 DNVWPAE--IPAFKHDVSWLYNSLDGMGGKVLEAIATYLKLERDFFK--PTVQDGNSVLR 172

Query: 185 FNHYGVQDADPSKEYILGTPAHSDPSLITLLATDEVPGLQICRNIHANPRVWENVVPLKD 244
             HY     D +    +   AH D + ITLL   E  GL++          W  + P   
Sbjct: 173 LLHYPPIPKDAT---GVRAGAHGDINTITLLLGAEEGGLEVLD----RDGQWLPINPPPG 225

Query: 245 AFIVNIGDMLERMSNCVFRSTMHRVL------FRQERYTIAYFVYPSNDAMIECFPTCKS 298
             ++NIGDMLER++N V  ST+HRV+          RY+  +F++ ++D  I+    C +
Sbjct: 226 CLVINIGDMLERLTNNVLPSTVHRVVNPPPERRGVPRYSTPFFLHFASDYEIKTLQNCVT 285

Query: 299 EEKPPK 304
            E P +
Sbjct: 286 AENPDR 291
>1odm_A Isopenicillin N synthase; antibiotic biosynthesis, B-lactam antibiotic, oxygenase, penicillin biosynthesis, oxidoreductase, iron; HET: ASV; 1.15A {Emericella nidulans} SCOP: b.82.2.1 PDB: 1blz_A* 1hb1_A* 1hb2_A* 1hb3_A* 1hb4_A* 1ips_A 1obn_A* 1oc1_A* 1bk0_A* 1odn_A* 1qiq_A* 1qje_A* 1qjf_A* 1uzw_A* 1w03_A* 1w04_A* 1w05_A* 1w06_A* 1w3v_A* 1w3x_A* ... Length = 331 Back     alignment and structure
>1dcs_A Deacetoxycephalosporin C synthase; ferrous oxygenase, 2-oxoglutarate, oxidoreduc antibiotics, merohedral twinning; 1.30A {Streptomyces clavuligerus} SCOP: b.82.2.1 PDB: 1rxf_A 1rxg_A* 1unb_A* 1uo9_A 1uob_A* 1uof_A* 1uog_A* 2jb8_A 1w28_A 1w2a_X 1w2n_A* 1w2o_A* 1hjg_A 1hjf_A 1e5h_A 1e5i_A* Length = 311 Back     alignment and structure
>3on7_A Oxidoreductase, iron/ascorbate family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.20A {Shewanella oneidensis} Length = 280 Back     alignment and structure
>1w9y_A 1-aminocyclopropane-1-carboxylate oxidase 1; oxygenase, 2OG oxygenase, ACCO, ACC oxidase; 2.1A {Petunia hybrida} SCOP: b.82.2.1 PDB: 1wa6_X Length = 319 Back     alignment and structure
>1gp6_A Leucoanthocyanidin dioxygenase; 2-oxoglutarate dependent dioxygenase, flavonoid biosynthesis; HET: MES QUE DH2; 1.75A {Arabidopsis thaliana} SCOP: b.82.2.1 PDB: 1gp5_A* 1gp4_A* 2brt_A* Length = 356 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query304
3oox_A312 Putative 2OG-Fe(II) oxygenase family protein; stru 100.0
1gp6_A356 Leucoanthocyanidin dioxygenase; 2-oxoglutarate dep 100.0
1odm_A331 Isopenicillin N synthase; antibiotic biosynthesis, 100.0
1w9y_A319 1-aminocyclopropane-1-carboxylate oxidase 1; oxyge 100.0
1dcs_A311 Deacetoxycephalosporin C synthase; ferrous oxygena 100.0
3on7_A280 Oxidoreductase, iron/ascorbate family; structural 100.0
2rg4_A216 Uncharacterized protein; rhodobacterales, oceanico 93.25
3dkq_A243 PKHD-type hydroxylase SBAL_3634; putative oxygenas 93.01
3i3q_A211 Alpha-ketoglutarate-dependent dioxygenase ALKB; be 92.5
2hbt_A247 EGL nine homolog 1; prolyl hydroxylase, hypoxia in 92.2
2iuw_A238 Alkylated repair protein ALKB homolog 3; oxidoredu 88.86
3tht_A345 Alkylated DNA repair protein ALKB homolog 8; struc 87.55
3s57_A204 Alpha-ketoglutarate-dependent dioxygenase ALKB HO; 87.33
3itq_A216 Prolyl 4-hydroxylase, alpha subunit domain protei; 86.15
2jig_A224 Prolyl-4 hydroxylase; hydrolase; HET: PD2; 1.85A { 81.84
>3oox_A Putative 2OG-Fe(II) oxygenase family protein; structural genomics, joint center for structural genomics; HET: MSE; 1.44A {Caulobacter crescentus CB15} Back     alignment and structure
Probab=100.00  E-value=4.2e-73  Score=513.53  Aligned_cols=276  Identities=26%  Similarity=0.400  Sum_probs=244.0

Q ss_pred             CCCCceeeCCC--cchHHHHHHHHHHHHhcceEEEEecCCChHHHHHHHHHHHHHhcCCHHHHhhhhhc--CCCCcccCC
Q 022020           12 SAALNCIDLSD--PDIQKSAASLKQACMDSGFFYVINHGISKEFMDEVFAQSKKFFELPFDEKMKLWVE--RNRGYKQPL   87 (304)
Q Consensus        12 ~~~iPvIDl~~--~~~~~~~~~l~~A~~~~Gff~l~nhGi~~~~~~~~~~~~~~fF~lp~e~K~~~~~~--~~~GY~~~~   87 (304)
                      ..+||||||+.  ..+++++++|.+||++||||||+||||+.++++++++.+++||+||.|+|+++...  .++||.+.+
T Consensus         4 ~~~iPvIDls~~~~~~~~~~~~l~~A~~~~GFf~v~nHGi~~~~~~~~~~~~~~fF~lP~e~K~~~~~~~~~~~Gy~~~g   83 (312)
T 3oox_A            4 TSAIDPVSFSLYAKDFTRFAQELGASFERYGFAVLSDYDLDQARIDAAVDSAKAFFALPVETKKQYAGVKGGARGYIPFG   83 (312)
T ss_dssp             CCSSCCEETHHHHHCHHHHHHHHHHHHHHHSEEEEESCCSCHHHHHHHHHHHHHHHTSCHHHHGGGBSSGGGTSEEECCC
T ss_pred             CCCCCeEEChHhcccHHHHHHHHHHHHHhCcEEEEECCCCCHHHHHHHHHHHHHHHCCCHHHHhhhccCCCCcccccccc
Confidence            46899999974  35678999999999999999999999999999999999999999999999999763  789999888


Q ss_pred             cccccccccccCccc-chhhhcCCC-CCCCCCCCCCCCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHhCCC
Q 022020           88 KNQFFDQETNQQAHG-EAYSLVGPE-TEDDLDPEKPLCGPNVWPSADVLPGWKETMLRYQQEALNLGRKIGRIIALALDL  165 (304)
Q Consensus        88 ~e~~~~~~~~~~~d~-E~~~~~~~~-~~~~~~~~~~~~~~n~wP~~~~~~~f~~~~~~y~~~~~~la~~ll~~l~~~Lgl  165 (304)
                      .+ .....  ...|+ |+|. ++.+ +.+++.  .....+|.||+.  +|+||+++++|+++|.+|+.+||++|+++||+
T Consensus        84 ~e-~~~~~--~~~D~kE~~~-~~~~~~~~~~~--~~~~~~n~wP~~--~p~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl  155 (312)
T 3oox_A           84 VE-TAKGA--DHYDLKEFWH-MGRDLPPGHRF--RAHMADNVWPAE--IPAFKHDVSWLYNSLDGMGGKVLEAIATYLKL  155 (312)
T ss_dssp             CC-CSTTS--CSCCCCEEEE-ECCCCCTTCGG--GGTSCCCCCCTT--STTHHHHHHHHHHHHHHHHHHHHHHHHHHTTS
T ss_pred             ce-ecCCC--CCCCceeeeE-eecCCCcCCcc--hhccCCCCCCCc--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCc
Confidence            77 54433  56788 9999 8765 332211  123568999987  79999999999999999999999999999999


Q ss_pred             CCcccCCCcccCCCcceEEEEecCCCCCCCCcccccccccccCCCceeEEeeCCCCceeEEeCCCCCCCceEEccCCCCe
Q 022020          166 DVDFFGKPEILGNAMPYVSFNHYGVQDADPSKEYILGTPAHSDPSLITLLATDEVPGLQICRNIHANPRVWENVVPLKDA  245 (304)
Q Consensus       166 ~~~~~~~~~~~~~~~~~lr~~~Yp~~~~~~~~~~~~~~~~HtD~~~lTll~~d~~~GLqv~~~~~~~~~~W~~v~~~~g~  245 (304)
                      ++++|.  +.+..+.+.||++||||++... . + +|+++|||+|+||||+||+++||||+..+    |+|++|+|+||+
T Consensus       156 ~~~~f~--~~~~~~~~~lr~~~Ypp~~~~~-~-~-~g~~~HtD~g~lTlL~qd~v~GLqV~~~~----g~W~~V~p~pg~  226 (312)
T 3oox_A          156 ERDFFK--PTVQDGNSVLRLLHYPPIPKDA-T-G-VRAGAHGDINTITLLLGAEEGGLEVLDRD----GQWLPINPPPGC  226 (312)
T ss_dssp             CTTTTH--HHHTTCCCEEEEEEECCCSSCC-C----CEEEECCCSSEEEEECCTTSCEEEECTT----SCEEECCCCSSC
T ss_pred             CHHHHH--HHhcCCcceeeeEecCCCCCCc-C-C-cCccceecCceEEEEeEcCcCceEEECCC----CcEEECCCCCCe
Confidence            999999  8788888999999999998653 2 4 99999999999999999999999999876    679999999999


Q ss_pred             EEEEcchhHHHHhCCcccccccccC-C-----CCceeEEEeeecCCCCceeecCCCCCCCCCCCC
Q 022020          246 FIVNIGDMLERMSNCVFRSTMHRVL-F-----RQERYTIAYFVYPSNDAMIECFPTCKSEEKPPK  304 (304)
Q Consensus       246 ~iVn~Gd~l~~~T~G~~~s~~HRV~-~-----~~~R~S~~~f~~p~~d~~i~p~~~~~~~~~p~~  304 (304)
                      +||||||+||+||||+|||++|||+ +     +.+|||++||++|+.|++|.|+++|+++++|++
T Consensus       227 ~vVNiGD~l~~~TnG~~kS~~HRVv~~~~~~~~~~R~Sia~F~~P~~d~~i~pl~~~v~~~~p~~  291 (312)
T 3oox_A          227 LVINIGDMLERLTNNVLPSTVHRVVNPPPERRGVPRYSTPFFLHFASDYEIKTLQNCVTAENPDR  291 (312)
T ss_dssp             EEEEECHHHHHHTTTSSCCCCEEECCCCGGGTTSCEEECCEEECCCTTCEECCCGGGCCSSSCCS
T ss_pred             EEEEhHHHHHHHhCCeecCCCceEeCCCccCCCCCEEEEEEEecCCCCcEEecCccccCCCCccc
Confidence            9999999999999999999999999 5     357999999999999999999999999999874
>1gp6_A Leucoanthocyanidin dioxygenase; 2-oxoglutarate dependent dioxygenase, flavonoid biosynthesis; HET: MES QUE DH2; 1.75A {Arabidopsis thaliana} SCOP: b.82.2.1 PDB: 1gp5_A* 1gp4_A* 2brt_A* Back     alignment and structure
>1odm_A Isopenicillin N synthase; antibiotic biosynthesis, B-lactam antibiotic, oxygenase, penicillin biosynthesis, oxidoreductase, iron; HET: ASV; 1.15A {Emericella nidulans} SCOP: b.82.2.1 PDB: 1blz_A* 1hb1_A* 1hb2_A* 1hb3_A* 1hb4_A* 1ips_A 1obn_A* 1oc1_A* 1bk0_A* 1odn_A* 1qiq_A* 1qje_A* 1qjf_A* 1uzw_A* 1w03_A* 1w04_A* 1w05_A* 1w06_A* 1w3v_A* 1w3x_A* ... Back     alignment and structure
>1w9y_A 1-aminocyclopropane-1-carboxylate oxidase 1; oxygenase, 2OG oxygenase, ACCO, ACC oxidase; 2.1A {Petunia hybrida} SCOP: b.82.2.1 PDB: 1wa6_X Back     alignment and structure
>1dcs_A Deacetoxycephalosporin C synthase; ferrous oxygenase, 2-oxoglutarate, oxidoreduc antibiotics, merohedral twinning; 1.30A {Streptomyces clavuligerus} SCOP: b.82.2.1 PDB: 1rxf_A 1rxg_A* 1unb_A* 1uo9_A 1uob_A* 1uof_A* 1uog_A* 2jb8_A 1w28_A 1w2a_X 1w2n_A* 1w2o_A* 1hjg_A 1hjf_A 1e5h_A 1e5i_A* Back     alignment and structure
>3on7_A Oxidoreductase, iron/ascorbate family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.20A {Shewanella oneidensis} Back     alignment and structure
>2rg4_A Uncharacterized protein; rhodobacterales, oceanicola granulosus HTCC2516, Q2CBJ1_9RHO structural genomics, PSI-2; 1.90A {Oceanicola granulosus} PDB: 3bvc_A Back     alignment and structure
>3dkq_A PKHD-type hydroxylase SBAL_3634; putative oxygenase, structural genomics, JOI for structural genomics, JCSG; 2.26A {Shewanella baltica OS155} Back     alignment and structure
>3i3q_A Alpha-ketoglutarate-dependent dioxygenase ALKB; beta jellyroll, DNA damage, DNA repair, iron, M binding, oxidoreductase; HET: AKG; 1.40A {Escherichia coli} SCOP: b.82.2.10 PDB: 2fd8_A* 2fdg_A* 2fdh_A* 2fdf_A* 2fdj_A 2fdk_A* 2fdi_A* 3i2o_A* 3i3m_A* 3i49_A* 3t4h_B* 3t3y_A* 3t4v_A* 3o1t_A* 3o1o_A* 3o1m_A* 3o1r_A* 3o1s_A* 3o1p_A* 3o1u_A* ... Back     alignment and structure
>2hbt_A EGL nine homolog 1; prolyl hydroxylase, hypoxia inducible factor, HIF, 2- oxoglutarate, oxygenase, oxidoreductase; HET: UN9; 1.60A {Homo sapiens} PDB: 2hbu_A* 2g1m_A* 3hqu_A* 3hqr_A* 2y33_A* 2y34_A* 2g19_A* 3ouj_A* 3ouh_A* 3oui_A* Back     alignment and structure
>2iuw_A Alkylated repair protein ALKB homolog 3; oxidoreductase, DNA/RNA repair, demethylase, beta jellyroll; HET: AKG; 1.50A {Homo sapiens} SCOP: b.82.2.10 Back     alignment and structure
>3tht_A Alkylated DNA repair protein ALKB homolog 8; structural genomics, PSI-biology, northeast structural genom consortium, NESG; HET: AKG; 3.01A {Homo sapiens} PDB: 3thp_A* Back     alignment and structure
>3s57_A Alpha-ketoglutarate-dependent dioxygenase ALKB HO; protein-DNA complex, jelly-roll fold, dioxygenase, dsDNA BIN plasma, oxidoreductase-DNA complex; HET: AKG; 1.60A {Homo sapiens} PDB: 3s5a_A* 3rzg_A 3rzl_A 3rzh_A* 3rzj_A* 3rzk_A* 3rzm_A 3bty_A* 3buc_A* 3h8r_A* 3h8o_A* 3h8x_A* 3btx_A* 3bu0_A* 3btz_A* Back     alignment and structure
>3itq_A Prolyl 4-hydroxylase, alpha subunit domain protei; double-stranded beta helix, alpha-keto dependent non-heme iron oxygenase; 1.40A {Bacillus anthracis str} Back     alignment and structure
>2jig_A Prolyl-4 hydroxylase; hydrolase; HET: PD2; 1.85A {Chlamydomonas reinhardtii} PDB: 3gze_A 2v4a_A 2jij_A Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 304
d1dcsa_311 b.82.2.1 (A:) Deacetoxycephalosporin C synthase {S 1e-48
d1gp6a_349 b.82.2.1 (A:) Anthocyanidin synthase {Mouse-ear cr 3e-48
d1w9ya1307 b.82.2.1 (A:2-308) 1-aminocyclopropane-1-carboxyla 3e-45
d1odma_329 b.82.2.1 (A:) Isopenicillin N synthase {Emericella 2e-41
>d1dcsa_ b.82.2.1 (A:) Deacetoxycephalosporin C synthase {Streptomyces clavuligerus [TaxId: 1901]} Length = 311 Back     information, alignment and structure

class: All beta proteins
fold: Double-stranded beta-helix
superfamily: Clavaminate synthase-like
family: Penicillin synthase-like
domain: Deacetoxycephalosporin C synthase
species: Streptomyces clavuligerus [TaxId: 1901]

 Score =  162 bits (410), Expect = 1e-48
 Identities = 37/281 (13%), Positives = 83/281 (29%), Gaps = 21/281 (7%)

Query: 18  IDLSDPDIQKSAASLKQACMDSGFFYVINHGISKEFMDEVFAQSKKFFELPFDEKMKLWV 77
             L++          ++   D G FY+ + G++   +         FFE   + + +   
Sbjct: 8   FSLAELQQGLHQDEFRRCLRDKGLFYLTDCGLTDTELKSAKDLVIDFFEHGSEAEKRAV- 66

Query: 78  ERNRGYKQPLKNQFFDQETNQQAHGEAYSLVGPETEDDLDPEKPLCGPNVWPSADVLPGW 137
             +            + E+  Q              D           N++PS      +
Sbjct: 67  -TSPVPTMRRGFTGLESESTAQITNTG------SYSDYSMCYSMGTADNLFPS----GDF 115

Query: 138 KETMLRYQQEALNLGRKIGRIIALALDLDVDFFGKPEILGNAMPYVSFNHYGVQDADPSK 197
           +    +Y        R + R +  A   + D   +  +    +    +     +     +
Sbjct: 116 ERIWTQYFDRQYTASRAVAREVLRATGTEPDGGVEAFLDCEPLLRFRYFPQVPEHRSA-E 174

Query: 198 EYILGTPAHSDPSLITLLATDEVPGLQICRNIHANPRVWENVVPLKDAFIVNIGDMLERM 257
           E  L    H D S++TL+         +          + ++    DA +V  G +   +
Sbjct: 175 EQPLRMAPHYDLSMVTLIQQTPCANGFVSLQAE-VGGAFTDLPYRPDAVLVFCGAIATLV 233

Query: 258 SNCVFRSTMHRVL-------FRQERYTIAYFVYPSNDAMIE 291
           +    ++  H V            R +  +F+ P+ D    
Sbjct: 234 TGGQVKAPRHHVAAPRRDQIAGSSRTSSVFFLRPNADFTFS 274
>d1gp6a_ b.82.2.1 (A:) Anthocyanidin synthase {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 349 Back     information, alignment and structure
>d1w9ya1 b.82.2.1 (A:2-308) 1-aminocyclopropane-1-carboxylate oxidase 1 {Petunia hybrida [TaxId: 4102]} Length = 307 Back     information, alignment and structure
>d1odma_ b.82.2.1 (A:) Isopenicillin N synthase {Emericella nidulans [TaxId: 162425]} Length = 329 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query304
d1gp6a_349 Anthocyanidin synthase {Mouse-ear cress (Arabidops 100.0
d1w9ya1307 1-aminocyclopropane-1-carboxylate oxidase 1 {Petun 100.0
d1odma_329 Isopenicillin N synthase {Emericella nidulans [Tax 100.0
d1dcsa_311 Deacetoxycephalosporin C synthase {Streptomyces cl 100.0
d2iuwa1210 AlkB homolog 3 {Human (Homo sapiens) [TaxId: 9606] 94.12
d2fdia1200 Alkylated DNA repair protein AlkB {Escherichia col 87.27
>d1gp6a_ b.82.2.1 (A:) Anthocyanidin synthase {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]} Back     information, alignment and structure
class: All beta proteins
fold: Double-stranded beta-helix
superfamily: Clavaminate synthase-like
family: Penicillin synthase-like
domain: Anthocyanidin synthase
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=100.00  E-value=1.6e-65  Score=469.43  Aligned_cols=269  Identities=27%  Similarity=0.409  Sum_probs=223.9

Q ss_pred             cCCCCceeeCCC------cchHHHHHHHHHHHHhcceEEEEecCCChHHHHHHHHHHHHHhcCCHHHHhhhhhc----CC
Q 022020           11 VSAALNCIDLSD------PDIQKSAASLKQACMDSGFFYVINHGISKEFMDEVFAQSKKFFELPFDEKMKLWVE----RN   80 (304)
Q Consensus        11 ~~~~iPvIDl~~------~~~~~~~~~l~~A~~~~Gff~l~nhGi~~~~~~~~~~~~~~fF~lp~e~K~~~~~~----~~   80 (304)
                      ...+||||||+.      ..+++++++|.+||+++|||||+||||+.++++++++.+++||+||.|+|+++...    .+
T Consensus        42 ~~~~IPvIDls~l~~~d~~~r~~~~~~l~~A~~~~GFf~l~nHGI~~~li~~~~~~~~~FF~lP~eeK~k~~~~~~~~~~  121 (349)
T d1gp6a_          42 DGPQVPTIDLKNIESDDEKIRENCIEELKKASLDWGVMHLINHGIPADLMERVKKAGEEFFSLSVEEKEKYANDQATGKI  121 (349)
T ss_dssp             CSCCCCEEECTTTTCSCHHHHHHHHHHHHHHHHHTSEEEEESCSCCHHHHHHHHHHHHHHHTSCHHHHGGGBCBGGGTBC
T ss_pred             CCCCcCeEEChhcCCCCHHHHHHHHHHHHHHHHhCCEEEEEccCCCHHHHHHHHHHHHHHHcCCHHHHhhhhcccccCCc
Confidence            456899999963      23567999999999999999999999999999999999999999999999999765    23


Q ss_pred             CCcccCCcccccccccccCccc-chhhhcCCCCCCCCCCCCCCCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHHHHHH
Q 022020           81 RGYKQPLKNQFFDQETNQQAHG-EAYSLVGPETEDDLDPEKPLCGPNVWPSADVLPGWKETMLRYQQEALNLGRKIGRII  159 (304)
Q Consensus        81 ~GY~~~~~e~~~~~~~~~~~d~-E~~~~~~~~~~~~~~~~~~~~~~n~wP~~~~~~~f~~~~~~y~~~~~~la~~ll~~l  159 (304)
                      .||.....+ .  ..  ...++ +.+. ....+.       ....+|.||..  .+.|++.+++|+++|.+++.+|++++
T Consensus       122 ~~~g~~~~~-~--~~--~~~~~~~~~~-~~~~~~-------~~~~~n~wp~~--~~~f~e~~~~~~~~~~~la~~ll~~l  186 (349)
T d1gp6a_         122 QGYGSKLAN-N--AS--GQLEWEDYFF-HLAYPE-------EKRDLSIWPKT--PSDYIEATSEYAKCLRLLATKVFKAL  186 (349)
T ss_dssp             SEEECCCCC-S--TT--CCCCSCEEEE-EEEESG-------GGCCGGGSCCS--STTHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ccccccccc-c--cc--cccchhhhhc-cccccc-------ccccccccccc--cchHHHHHHHHHHHHHHHHHhhhHHH
Confidence            333332222 1  11  22333 3222 111111       12467899988  78999999999999999999999999


Q ss_pred             HHhCCCCCcccCCCccc---CCCcceEEEEecCCCCCCCCcccccccccccCCCceeEEeeCCCCceeEEeCCCCCCCce
Q 022020          160 ALALDLDVDFFGKPEIL---GNAMPYVSFNHYGVQDADPSKEYILGTPAHSDPSLITLLATDEVPGLQICRNIHANPRVW  236 (304)
Q Consensus       160 ~~~Lgl~~~~~~~~~~~---~~~~~~lr~~~Yp~~~~~~~~~~~~~~~~HtD~~~lTll~~d~~~GLqv~~~~~~~~~~W  236 (304)
                      +++||+++++|.  +.+   ....+.||++|||+++...   ..+|+++|||+|+||||+|+.++||||+.+     |+|
T Consensus       187 a~~Lgl~~~~~~--~~~~~~~~~~~~lrl~~Yp~~~~~~---~~~g~~~HtD~g~lTlL~q~~~~GLqv~~~-----g~W  256 (349)
T d1gp6a_         187 SVGLGLEPDRLE--KEVGGLEELLLQMKINYYPKCPQPE---LALGVEAHTDVSALTFILHNMVPGLQLFYE-----GKW  256 (349)
T ss_dssp             HHHTTSCTTHHH--HHTTHHHHCEEEEEEEEECCCSSTT---TCCSEEEECCCSSEEEEEECSCCCEEEEET-----TEE
T ss_pred             HHHcCCCHHHHH--HHhccccccceeeeecccccccchh---hccccccCCCCcceEEEeccCCcceeeecC-----Cce
Confidence            999999999887  554   3467899999999987542   678999999999999999999999999764     569


Q ss_pred             EEccCCCCeEEEEcchhHHHHhCCcccccccccC-C-CCceeEEEeeecCCCCcee-ecCCCCCCCCCCCC
Q 022020          237 ENVVPLKDAFIVNIGDMLERMSNCVFRSTMHRVL-F-RQERYTIAYFVYPSNDAMI-ECFPTCKSEEKPPK  304 (304)
Q Consensus       237 ~~v~~~~g~~iVn~Gd~l~~~T~G~~~s~~HRV~-~-~~~R~S~~~f~~p~~d~~i-~p~~~~~~~~~p~~  304 (304)
                      ++|+|.+|++|||+||+|++||||+|||++|||+ + +++|||++||++|+.|++| .|+++|+++++|+|
T Consensus       257 ~~V~p~~~a~vVNvGD~l~~~TnG~~~St~HRVv~~~~~~R~Si~~F~~p~~d~~i~~pl~~~v~~~~p~~  327 (349)
T d1gp6a_         257 VTAKCVPDSIVMHIGDTLEILSNGKYKSILHRGLVNKEKVRISWAVFCEPPKDKIVLKPLPEMVSVESPAK  327 (349)
T ss_dssp             EECCCCTTCEEEEECHHHHHHTTTSSCCCCEEECCCSSCCEEEEEEEEECCTTTCEECCCGGGCCSSSCCS
T ss_pred             EEccCCCCCeeeeHHhHHHHHhCCCccCcCccccCCCCCCeEEEEEEecCCCcceeecCCHHHcCCCCCCC
Confidence            9999999999999999999999999999999999 4 6799999999999999765 89999999999875
>d1w9ya1 b.82.2.1 (A:2-308) 1-aminocyclopropane-1-carboxylate oxidase 1 {Petunia hybrida [TaxId: 4102]} Back     information, alignment and structure
>d1odma_ b.82.2.1 (A:) Isopenicillin N synthase {Emericella nidulans [TaxId: 162425]} Back     information, alignment and structure
>d1dcsa_ b.82.2.1 (A:) Deacetoxycephalosporin C synthase {Streptomyces clavuligerus [TaxId: 1901]} Back     information, alignment and structure
>d2iuwa1 b.82.2.10 (A:70-279) AlkB homolog 3 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2fdia1 b.82.2.10 (A:15-214) Alkylated DNA repair protein AlkB {Escherichia coli [TaxId: 562]} Back     information, alignment and structure