Citrus Sinensis ID: 022028
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
ID ![]() | Alignment graph ![]() | Length ![]() |
Definition ![]() |
RBH(Q2H) ![]() |
RBH(H2Q) ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 304 | 2.2.26 [Sep-21-2011] | |||||||
| A5UMN6 | 435 | 5-methylthioadenosine/S-a | yes | no | 0.835 | 0.583 | 0.371 | 7e-42 | |
| Q466Q9 | 432 | 5-methylthioadenosine/S-a | yes | no | 0.835 | 0.587 | 0.333 | 8e-36 | |
| Q8PUQ3 | 432 | 5-methylthioadenosine/S-a | yes | no | 0.835 | 0.587 | 0.325 | 3e-35 | |
| Q8TRA4 | 432 | 5-methylthioadenosine/S-a | yes | no | 0.828 | 0.583 | 0.319 | 7e-34 | |
| A5D1G6 | 433 | 5-methylthioadenosine/S-a | yes | no | 0.842 | 0.591 | 0.306 | 6e-32 | |
| Q0AYV2 | 431 | 5-methylthioadenosine/S-a | yes | no | 0.835 | 0.589 | 0.313 | 1e-31 | |
| B0K2W0 | 431 | 5-methylthioadenosine/S-a | yes | no | 0.707 | 0.498 | 0.317 | 6e-30 | |
| B0K8R8 | 431 | 5-methylthioadenosine/S-a | yes | no | 0.707 | 0.498 | 0.317 | 6e-30 | |
| A4J675 | 433 | 5-methylthioadenosine/S-a | yes | no | 0.845 | 0.593 | 0.287 | 6e-30 | |
| O27549 | 427 | 5-methylthioadenosine/S-a | yes | no | 0.782 | 0.557 | 0.333 | 1e-29 |
| >sp|A5UMN6|MTAD_METS3 5-methylthioadenosine/S-adenosylhomocysteine deaminase OS=Methanobrevibacter smithii (strain PS / ATCC 35061 / DSM 861) GN=mtaD PE=3 SV=1 | Back alignment and function desciption |
|---|
Score = 171 bits (432), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 103/277 (37%), Positives = 161/277 (58%), Gaps = 23/277 (8%)
Query: 17 SSSTMILHNAVIVT-MD-KESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQ 74
+ +T+++ +A+I+ +D KE + G + + D+I IG D D++ID +
Sbjct: 2 TDNTILIKDALILNPLDFKEIK----GSLLIKNDKIAEIGTDID-----ESNVDKVIDAK 52
Query: 75 SQILLPGFVNTHVHTSQQLAKGIADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIEL 134
+ILLPGFVNTH H S L +G+ADD+ L +WL+D IWP E+N+T E YI LL IEL
Sbjct: 53 GKILLPGFVNTHTHLSMTLFRGLADDLSLDSWLNDNIWPMEANLTSEYCYIGALLGAIEL 112
Query: 135 IHSGVTCFAEAGGQHVSEMAKAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQK 194
I SG T F++ ++ ++AKAVE G+RA L +D G+ + I+
Sbjct: 113 IKSGTTTFSDM-YFYMEDVAKAVEESGIRAVLSYGMIDFGDD-------EKREHEIKENI 164
Query: 195 ELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVM 254
L+ K + ADGRI+++FG A+ LL + R +A E+ TGIH+HV+E E +
Sbjct: 165 ALFEKCNGMADGRIKVFFGPHSPYTASKDLLEDVRWLANEYNTGIHIHVSETQKE---IN 221
Query: 255 DTRKV-DHGTVTFLDKIEFLQNNLLSAHTVWVNHTEV 290
D+ + D +LD I FL ++++AH+VW++H E+
Sbjct: 222 DSLEAHDLRPFEYLDSIGFLGPDVVAAHSVWLSHNEI 258
|
Catalyzes the deamination of 5-methylthioadenosine and S-adenosyl-L-homocysteine into 5-methylthioinosine and S-inosyl-L-homocysteine, respectively. Is also able to deaminate adenosine. Methanobrevibacter smithii (strain PS / ATCC 35061 / DSM 861) (taxid: 420247) EC: 3EC: .EC: 5EC: .EC: 4EC: .EC: 3EC: 1 |
| >sp|Q466Q9|MTAD_METBF 5-methylthioadenosine/S-adenosylhomocysteine deaminase OS=Methanosarcina barkeri (strain Fusaro / DSM 804) GN=mtaD PE=3 SV=1 | Back alignment and function description |
|---|
Score = 150 bits (380), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 90/270 (33%), Positives = 140/270 (51%), Gaps = 16/270 (5%)
Query: 21 MILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLP 80
+I+ NA ++TMD + +NG V + +I IG+ + S+ AD +ID + +++P
Sbjct: 4 IIVKNAYVMTMDPDEGDLKNGTVVIEDGKITEIGE------KTSESADTVIDAKHSVVMP 57
Query: 81 GFVNTHVHTSQQLAKGIADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVT 140
G VNTH H + L +G ADD+ L WL IWP E+ +T ED Y +LL +E+I SG T
Sbjct: 58 GLVNTHTHAAMTLFRGYADDLQLADWLEGHIWPAEAKLTAEDVYKGSLLACLEMIRSGTT 117
Query: 141 CFAEAGGQHVSEMAKAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYAKH 200
FA+ ++ E AKAVE GLRA L GL W ++ K
Sbjct: 118 SFADM-YFYMDETAKAVEASGLRASLCH-------GLIELWNEEKGATDLKEGKRFVRAW 169
Query: 201 HHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVD 260
AADGRI+ +G ++ L + R+ A GIH+H+ E E +++ +
Sbjct: 170 QGAADGRIKTMYGPHAPNTCSEEFLAKVREEANRDGAGIHIHLLET--EAELLAMKERYG 227
Query: 261 HGTVTFLDKIEFLQNNLLSAHTVWVNHTEV 290
+V L+ I FL ++L+AH VW++ ++
Sbjct: 228 KCSVHLLEDIGFLGPDVLAAHCVWLSDGDI 257
|
Catalyzes the deamination of 5-methylthioadenosine and S-adenosyl-L-homocysteine into 5-methylthioinosine and S-inosyl-L-homocysteine, respectively. Is also able to deaminate adenosine. Methanosarcina barkeri (strain Fusaro / DSM 804) (taxid: 269797) EC: 3 EC: . EC: 5 EC: . EC: 4 EC: . EC: 3 EC: 1 |
| >sp|Q8PUQ3|MTAD_METMA 5-methylthioadenosine/S-adenosylhomocysteine deaminase OS=Methanosarcina mazei (strain ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM 88) GN=mtaD PE=3 SV=2 | Back alignment and function description |
|---|
Score = 149 bits (375), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 88/270 (32%), Positives = 139/270 (51%), Gaps = 16/270 (5%)
Query: 21 MILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLP 80
+I+ NA ++TMD ++ + G V + +I IG + + AD +ID + +++P
Sbjct: 4 IIIKNAYVLTMDPDAGDIKKGTVVIEDGKITEIGV------KTKESADTVIDAKGSVVMP 57
Query: 81 GFVNTHVHTSQQLAKGIADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVT 140
G VNTH H + L +G ADD+ L WL IWP E+ +T ED Y +LL +E+I SG T
Sbjct: 58 GLVNTHTHAAMTLFRGYADDLQLAEWLEKHIWPAEAQLTAEDVYRGSLLACLEMIRSGTT 117
Query: 141 CFAEAGGQHVSEMAKAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYAKH 200
FA+ + E AKAVE GLRA L GL W ++ ++ K
Sbjct: 118 SFADM-YFFMDETAKAVEASGLRASL-------SHGLIELWNEEKGENDLKEGKRFVRAW 169
Query: 201 HHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVD 260
AA GRI+ +G +D L + ++ AR+ G+H+HV E E +++ +
Sbjct: 170 QGAAKGRIKTMYGPHAPNTCSDEFLAKVKEAARQDGAGLHIHVLET--EAELLAMKERYG 227
Query: 261 HGTVTFLDKIEFLQNNLLSAHTVWVNHTEV 290
+V LD I F ++L+AH VW++ ++
Sbjct: 228 KCSVHMLDDIGFFGPDVLAAHCVWLSDGDI 257
|
Catalyzes the deamination of 5-methylthioadenosine and S-adenosyl-L-homocysteine into 5-methylthioinosine and S-inosyl-L-homocysteine, respectively. Is also able to deaminate adenosine. Methanosarcina mazei (strain ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM 88) (taxid: 192952) EC: 3 EC: . EC: 5 EC: . EC: 4 EC: . EC: 3 EC: 1 |
| >sp|Q8TRA4|MTAD_METAC 5-methylthioadenosine/S-adenosylhomocysteine deaminase OS=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) GN=mtaD PE=3 SV=2 | Back alignment and function description |
|---|
Score = 144 bits (364), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 87/272 (31%), Positives = 139/272 (51%), Gaps = 20/272 (7%)
Query: 21 MILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLP 80
+I+ NA ++TMD ++ +NG V + +I IG++ + AD +ID + +++P
Sbjct: 4 IIIKNAYVLTMDPDAGDLKNGTVVIEDGKITEIGENT------KENADTVIDAKGSVVMP 57
Query: 81 GFVNTHVHTSQQLAKGIADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVT 140
G NTH H + L +G ADD+ L WL IWP E+ + ED Y +LL +E+I SG T
Sbjct: 58 GLANTHTHAAMTLFRGYADDLQLAEWLEKHIWPAEAQLKAEDVYKGSLLACLEMIKSGTT 117
Query: 141 CFAEAGGQHVSEMAKAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYAKH 200
FA+ ++ E AKAVE GLRA L GL W + ++ K
Sbjct: 118 SFADM-YFYMDETAKAVEASGLRASLSH-------GLIELWNEEKGEADLKEGKRFVRAW 169
Query: 201 HHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVD 260
AADGRI+ +G ++ L + ++ A G+H+HV E E ++ K
Sbjct: 170 QGAADGRIKTMYGPHAPNTCSEEFLTKVKEEAHRDGAGLHIHVLETEAE----LNAMKER 225
Query: 261 HG--TVTFLDKIEFLQNNLLSAHTVWVNHTEV 290
+G +V L+ I F ++L+AH VW++ ++
Sbjct: 226 YGKCSVHLLEDIGFFGPDVLAAHCVWLSDGDI 257
|
Catalyzes the deamination of 5-methylthioadenosine and S-adenosyl-L-homocysteine into 5-methylthioinosine and S-inosyl-L-homocysteine, respectively. Is also able to deaminate adenosine. Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) (taxid: 188937) EC: 3 EC: . EC: 5 EC: . EC: 4 EC: . EC: 3 EC: 1 |
| >sp|A5D1G6|MTAD_PELTS 5-methylthioadenosine/S-adenosylhomocysteine deaminase OS=Pelotomaculum thermopropionicum (strain DSM 13744 / JCM 10971 / SI) GN=mtaD PE=3 SV=1 | Back alignment and function description |
|---|
Score = 138 bits (347), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 84/274 (30%), Positives = 138/274 (50%), Gaps = 18/274 (6%)
Query: 19 STMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQIL 78
+ +++ A ++TM+ V+R+G + + + I ++G + + F + ID +
Sbjct: 2 ANILIQGATVLTMEGPDGVYRDGEIAIAGNSILSVGPRGSVPEGFRP--GRSIDGTGMVA 59
Query: 79 LPGFVNTHVHTSQQLAKGIADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSG 138
+PGFVN H H + L + ADD+ LM WL ++IWP E + ED Y T+LC +E+I SG
Sbjct: 60 MPGFVNCHTHAAMTLLRSYADDMPLMKWLSEKIWPVEERLQPEDIYWGTMLCCLEMIKSG 119
Query: 139 VTCFAEAGGQHVSEMAKAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYA 198
T FA+ + +A AVE G+RACL + + G G A + D+ + +E
Sbjct: 120 TTTFADM-YFSMERVAAAVEESGMRACLSRGMIGVGSG-----ARKAIDESLSFVREW-- 171
Query: 199 KHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRK 258
+ ADGRI FG L + D+A GIH+HVAE E + + +
Sbjct: 172 --NGGADGRITAMFGPHAPYTCPPEYLKKVVDLAAREGAGIHIHVAETRDEIEQI----R 225
Query: 259 VDHGT--VTFLDKIEFLQNNLLSAHTVWVNHTEV 290
+GT V +LD + +L+AH V ++ ++
Sbjct: 226 AGYGTTPVRYLDAAGVFELPVLAAHCVHLDEGDI 259
|
Catalyzes the deamination of 5-methylthioadenosine and S-adenosyl-L-homocysteine into 5-methylthioinosine and S-inosyl-L-homocysteine, respectively. Is also able to deaminate adenosine. Pelotomaculum thermopropionicum (strain DSM 13744 / JCM 10971 / SI) (taxid: 370438) EC: 3 EC: . EC: 5 EC: . EC: 4 EC: . EC: 3 EC: 1 |
| >sp|Q0AYV2|MTAD_SYNWW 5-methylthioadenosine/S-adenosylhomocysteine deaminase OS=Syntrophomonas wolfei subsp. wolfei (strain Goettingen) GN=mtaD PE=3 SV=1 | Back alignment and function description |
|---|
Score = 137 bits (345), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 85/271 (31%), Positives = 135/271 (49%), Gaps = 17/271 (6%)
Query: 21 MILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLP 80
++L N I+ + + G + + IK +G +F D IID ++Q+LLP
Sbjct: 3 ILLDNISIIPVSGSNSFIEKGYLLIEDVFIKELGTGKAPEGEF----DHIIDGENQVLLP 58
Query: 81 GFVNTHVHTSQQLAKGIADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVT 140
GF+N H H + L +G ADD+ LM WL ++IWP E+ +T ED Y T+L +E+I SG T
Sbjct: 59 GFINAHTHAAMTLLRGYADDLPLMEWLENKIWPLEAKLTPEDIYWGTMLAIVEMIKSGTT 118
Query: 141 CFAEAGGQHVSEMAKAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYAKH 200
F + + E+A+AVEL G+RA L + + G ++ I+ +EL K
Sbjct: 119 TFNDM-YFCMDEVARAVELSGMRAVLARGMVGVGP---------ESEQAIEDSRELIGKW 168
Query: 201 HHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVD 260
A GRI G L ++ E + GIH+HVAE E + ++ ++
Sbjct: 169 QGQAGGRISFRLGPHAPYTCPPAYLERVMQLSDELQAGIHIHVAETRVEYEDIL--KQYG 226
Query: 261 HGTVTFLDKIEFLQ-NNLLSAHTVWVNHTEV 290
V+ L+ + Q +L+AH V +N E+
Sbjct: 227 KTPVSHLESLGLFQGRQVLAAHCVHLNEEEI 257
|
Catalyzes the deamination of 5-methylthioadenosine and S-adenosyl-L-homocysteine into 5-methylthioinosine and S-inosyl-L-homocysteine, respectively. Is also able to deaminate adenosine. Syntrophomonas wolfei subsp. wolfei (strain Goettingen) (taxid: 335541) EC: 3 EC: . EC: 5 EC: . EC: 4 EC: . EC: 3 EC: 1 |
| >sp|B0K2W0|MTAD_THEPX 5-methylthioadenosine/S-adenosylhomocysteine deaminase OS=Thermoanaerobacter sp. (strain X514) GN=mtaD PE=3 SV=1 | Back alignment and function description |
|---|
Score = 131 bits (330), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 73/230 (31%), Positives = 119/230 (51%), Gaps = 15/230 (6%)
Query: 21 MILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQ-SADILQQFSQMADQIIDLQSQILL 79
+++ N +++M +E + N +++ D I IG+ + DI D++ID +I
Sbjct: 3 LLIKNVALLSMKEEQPLMENTNIYIEGDTITYIGEINPDI------KVDRVIDGTKKIAT 56
Query: 80 PGFVNTHVHTSQQLAKGIADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGV 139
PG +N H H L + ADDV L WL IWP ES ++ ED Y +LL IE+I+SG
Sbjct: 57 PGLINAHTHLGMSLLRNYADDVPLFDWLSKHIWPVESKLSAEDVYWGSLLSMIEMIYSGT 116
Query: 140 TCFAEAGGQHVSEMAKAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYAK 199
T F + + E+AKA E +G+R L + ++ + + ++ ++LY
Sbjct: 117 TTFCDMYF-FMDEVAKATEEVGIRGVLTRGIIEESDA-------EINKEKLRDTRKLYNT 168
Query: 200 HHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYE 249
H+ ADGRI++ G + L E ++A+E TGIH+HV+E E
Sbjct: 169 WHNKADGRIKVMVGPHAPYTCSSSYLKEVVELAKELNTGIHIHVSETKKE 218
|
Catalyzes the deamination of 5-methylthioadenosine and S-adenosyl-L-homocysteine into 5-methylthioinosine and S-inosyl-L-homocysteine, respectively. Is also able to deaminate adenosine. Thermoanaerobacter sp. (strain X514) (taxid: 399726) EC: 3 EC: . EC: 5 EC: . EC: 4 EC: . EC: 3 EC: 1 |
| >sp|B0K8R8|MTAD_THEP3 5-methylthioadenosine/S-adenosylhomocysteine deaminase OS=Thermoanaerobacter pseudethanolicus (strain ATCC 33223 / 39E) GN=mtaD PE=3 SV=1 | Back alignment and function description |
|---|
Score = 131 bits (330), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 73/230 (31%), Positives = 119/230 (51%), Gaps = 15/230 (6%)
Query: 21 MILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQ-SADILQQFSQMADQIIDLQSQILL 79
+++ N +++M +E + N +++ D I IG+ + DI D++ID +I
Sbjct: 3 LLIKNVALLSMKEEQPLMENTNIYIEGDTITYIGEINPDI------KVDRVIDGTKKIAT 56
Query: 80 PGFVNTHVHTSQQLAKGIADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGV 139
PG +N H H L + ADDV L WL IWP ES ++ ED Y +LL IE+I+SG
Sbjct: 57 PGLINAHTHLGMSLLRNYADDVPLFDWLSKHIWPVESKLSAEDVYWGSLLSMIEMIYSGT 116
Query: 140 TCFAEAGGQHVSEMAKAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYAK 199
T F + + E+AKA E +G+R L + ++ + + ++ ++LY
Sbjct: 117 TTFCDMYF-FMDEVAKATEEVGIRGVLTRGIIEESDA-------EINKEKLRDTRKLYNT 168
Query: 200 HHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYE 249
H+ ADGRI++ G + L E ++A+E TGIH+HV+E E
Sbjct: 169 WHNKADGRIKVMVGPHAPYTCSSSYLKEVVELAKELNTGIHIHVSETKKE 218
|
Catalyzes the deamination of 5-methylthioadenosine and S-adenosyl-L-homocysteine into 5-methylthioinosine and S-inosyl-L-homocysteine, respectively. Is also able to deaminate adenosine. Thermoanaerobacter pseudethanolicus (strain ATCC 33223 / 39E) (taxid: 340099) EC: 3 EC: . EC: 5 EC: . EC: 4 EC: . EC: 3 EC: 1 |
| >sp|A4J675|MTAD_DESRM 5-methylthioadenosine/S-adenosylhomocysteine deaminase OS=Desulfotomaculum reducens (strain MI-1) GN=mtaD PE=3 SV=1 | Back alignment and function description |
|---|
Score = 131 bits (330), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 78/271 (28%), Positives = 135/271 (49%), Gaps = 14/271 (5%)
Query: 21 MILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLP 80
+++ A I+TM+ + G + + I +G F D++I+ Q+ +P
Sbjct: 4 LLIRGATILTMEGPEAIIETGELLIEDGWITHVGLPGSASGSFDM--DEVIEADGQVAMP 61
Query: 81 GFVNTHVHTSQQLAKGIADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVT 140
GF+N H H + L +G ADD+ LMTWL ++IWP+E MT ED Y T+L +E+I SG T
Sbjct: 62 GFINCHTHAAMTLLRGYADDLPLMTWLSEKIWPFEGRMTNEDIYWGTMLACLEMIKSGTT 121
Query: 141 CFAEAGGQHVSEMAKAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYAKH 200
CF + + ++A+AVE G+RA L + + T D + +EL
Sbjct: 122 CFGDM-YDCMHDVARAVEKTGMRAMLSRGMIGIAP---------TADKALIEAEELARNW 171
Query: 201 HHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVD 260
+ ADGRI + L + ++A + K GI++H+AE E + + ++
Sbjct: 172 NGKADGRITVMVAPHAPYTCPPDYLDKAMNLAAKHKLGINIHLAETLTEFEDI--KKQYG 229
Query: 261 HGTVTFLDKIEFLQNNLLSAHTVWVNHTEVN 291
V LD++ + +L+AH V ++ +++
Sbjct: 230 KTPVKHLDQLGLFKLPVLAAHCVHLDEEDMD 260
|
Catalyzes the deamination of 5-methylthioadenosine and S-adenosyl-L-homocysteine into 5-methylthioinosine and S-inosyl-L-homocysteine, respectively. Is also able to deaminate adenosine. Desulfotomaculum reducens (strain MI-1) (taxid: 349161) EC: 3 EC: . EC: 5 EC: . EC: 4 EC: . EC: 3 EC: 1 |
| >sp|O27549|MTAD_METTH 5-methylthioadenosine/S-adenosylhomocysteine deaminase OS=Methanothermobacter thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM 10044 / NBRC 100330 / Delta H) GN=mtaD PE=3 SV=1 | Back alignment and function description |
|---|
Score = 130 bits (328), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 85/255 (33%), Positives = 130/255 (50%), Gaps = 17/255 (6%)
Query: 38 FRNGGVFVVQDRIKAIGQSADILQQFSQM-ADQIIDLQSQILLPGFVNTHVHTSQQLAKG 96
R G V + +RI AD+ S AD +ID ++L+PG VNTH H S L +G
Sbjct: 19 IRRGSVLIEDNRI------ADVSNTLSPGDADTVIDGTGKLLIPGLVNTHTHLSMTLFRG 72
Query: 97 IADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQHVSEMAKA 156
IADD+ L WL+D IWP E+ + + Y LL IE+I SG T F + ++ +A+A
Sbjct: 73 IADDLPLDRWLNDHIWPAEARLNGDYCYAGALLGCIEMIRSGTTSFNDM-YFYMDHVARA 131
Query: 157 VELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQ 216
VE GLR + +D G+ + +R + + + + H AD RIR+ G
Sbjct: 132 VEEAGLRCVISHGMIDLGDTEKMTAELRES-------RRIIKECHGMADDRIRVALGPHS 184
Query: 217 IMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNN 276
++ LL ET +A + IH+HV+E EN+V +R V +LD++ L
Sbjct: 185 PYTCSEELLKETAALADKNDLMIHIHVSET--ENEVSEVSRSHGMTPVEYLDEVGVLGPR 242
Query: 277 LLSAHTVWVNHTEVN 291
++AH VW+ E++
Sbjct: 243 TVAAHCVWLKDWEID 257
|
Catalyzes the deamination of 5-methylthioadenosine and S-adenosyl-L-homocysteine into 5-methylthioinosine and S-inosyl-L-homocysteine, respectively. Is also able to deaminate adenosine. Methanothermobacter thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM 10044 / NBRC 100330 / Delta H) (taxid: 187420) EC: 3 EC: . EC: 5 EC: . EC: 4 EC: . EC: 3 EC: 1 |
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 304 | ||||||
| 255547626 | 471 | Atrazine chlorohydrolase, putative [Rici | 0.901 | 0.581 | 0.817 | 1e-133 | |
| 225425192 | 469 | PREDICTED: 5-methylthioadenosine/S-adeno | 0.901 | 0.584 | 0.795 | 1e-129 | |
| 296088709 | 493 | unnamed protein product [Vitis vinifera] | 0.898 | 0.553 | 0.798 | 1e-129 | |
| 147857762 | 470 | hypothetical protein VITISV_008190 [Viti | 0.901 | 0.582 | 0.795 | 1e-129 | |
| 449468824 | 484 | PREDICTED: 5-methylthioadenosine/S-adeno | 0.901 | 0.566 | 0.802 | 1e-129 | |
| 357152672 | 468 | PREDICTED: 5-methylthioadenosine/S-adeno | 0.904 | 0.587 | 0.724 | 1e-120 | |
| 115488528 | 471 | Os12g0468600 [Oryza sativa Japonica Grou | 0.881 | 0.569 | 0.717 | 1e-116 | |
| 226502244 | 468 | LOC100283572 [Zea mays] gi|195635661|gb| | 0.881 | 0.572 | 0.721 | 1e-115 | |
| 351721551 | 262 | uncharacterized protein LOC100500128 [Gl | 0.815 | 0.946 | 0.737 | 1e-109 | |
| 253761793 | 281 | hypothetical protein SORBIDRAFT_0011s011 | 0.815 | 0.882 | 0.746 | 1e-108 |
| >gi|255547626|ref|XP_002514870.1| Atrazine chlorohydrolase, putative [Ricinus communis] gi|223545921|gb|EEF47424.1| Atrazine chlorohydrolase, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 479 bits (1232), Expect = e-133, Method: Compositional matrix adjust.
Identities = 224/274 (81%), Positives = 245/274 (89%)
Query: 17 SSSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQ 76
SS +ILHNA IVTMD ESRVFRNGGVF+ QD+IKAIGQS+DIL ++S +AD II+L Q
Sbjct: 7 SSVLIILHNAAIVTMDAESRVFRNGGVFIEQDKIKAIGQSSDILGEYSTIADHIINLHGQ 66
Query: 77 ILLPGFVNTHVHTSQQLAKGIADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIH 136
LLPGFVNTHVHTSQQL +GIADDVDLMTWLH RIWPYESNMTE DSYISTLLCGIELIH
Sbjct: 67 FLLPGFVNTHVHTSQQLGRGIADDVDLMTWLHRRIWPYESNMTELDSYISTLLCGIELIH 126
Query: 137 SGVTCFAEAGGQHVSEMAKAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKEL 196
SGVTCFAEAGGQHVS MAKA E LGLRACL QS MD GEGLP SWA RTTDDCIQSQKEL
Sbjct: 127 SGVTCFAEAGGQHVSGMAKAAEELGLRACLTQSVMDSGEGLPPSWASRTTDDCIQSQKEL 186
Query: 197 YAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDT 256
Y K+H+ A+GRIR+WFGIRQIMN+TDRLLLETRD+ARE TGIHMHV+EI YENQVVMDT
Sbjct: 187 YEKYHNTAEGRIRVWFGIRQIMNSTDRLLLETRDIARELNTGIHMHVSEIAYENQVVMDT 246
Query: 257 RKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEV 290
RKV+HGTVTFLDKI+FLQ NLL+AHTVWVN+ E+
Sbjct: 247 RKVEHGTVTFLDKIDFLQKNLLAAHTVWVNNAEI 280
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225425192|ref|XP_002265828.1| PREDICTED: 5-methylthioadenosine/S-adenosylhomocysteine deaminase [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 468 bits (1205), Expect = e-129, Method: Compositional matrix adjust.
Identities = 218/274 (79%), Positives = 242/274 (88%)
Query: 17 SSSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQ 76
SSS +LHNA+IVTMD E+RVF NG + V +DRI A+GQS +I QF+ +A + DL Q
Sbjct: 5 SSSVTLLHNALIVTMDSETRVFYNGAIVVEKDRIIALGQSHNIFNQFAPLAQNVFDLHGQ 64
Query: 77 ILLPGFVNTHVHTSQQLAKGIADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIH 136
ILLPGF+NTHVHTSQQL +GIADDVDLMTWLH+RIWPYESNMTEEDSYISTLLCGIELIH
Sbjct: 65 ILLPGFINTHVHTSQQLGRGIADDVDLMTWLHERIWPYESNMTEEDSYISTLLCGIELIH 124
Query: 137 SGVTCFAEAGGQHVSEMAKAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKEL 196
SGVTCFAEAGGQHVSEMA+AVELLGLRACLVQSTMD G+GLP SWA RTTDDCIQSQKEL
Sbjct: 125 SGVTCFAEAGGQHVSEMARAVELLGLRACLVQSTMDSGQGLPPSWADRTTDDCIQSQKEL 184
Query: 197 YAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDT 256
Y KHH ADGRIRIW GIRQIMNATDRLLLETRD+A+E KTGIHMHVAEI YENQVV DT
Sbjct: 185 YEKHHDTADGRIRIWLGIRQIMNATDRLLLETRDVAKELKTGIHMHVAEISYENQVVKDT 244
Query: 257 RKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEV 290
RKVD+GTV++L+KI+ L NLL+AHTVWVN TE+
Sbjct: 245 RKVDYGTVSYLEKIDLLNGNLLAAHTVWVNDTEI 278
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|296088709|emb|CBI38159.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 468 bits (1205), Expect = e-129, Method: Compositional matrix adjust.
Identities = 218/273 (79%), Positives = 241/273 (88%)
Query: 17 SSSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQ 76
SSS +LHNA+IVTMD E+RVF NG + V +DRI A+GQS +I QF+ +A + DL Q
Sbjct: 5 SSSVTLLHNALIVTMDSETRVFYNGAIVVEKDRIIALGQSHNIFNQFAPLAQNVFDLHGQ 64
Query: 77 ILLPGFVNTHVHTSQQLAKGIADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIH 136
ILLPGF+NTHVHTSQQL +GIADDVDLMTWLH+RIWPYESNMTEEDSYISTLLCGIELIH
Sbjct: 65 ILLPGFINTHVHTSQQLGRGIADDVDLMTWLHERIWPYESNMTEEDSYISTLLCGIELIH 124
Query: 137 SGVTCFAEAGGQHVSEMAKAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKEL 196
SGVTCFAEAGGQHVSEMA+AVELLGLRACLVQSTMD G+GLP SWA RTTDDCIQSQKEL
Sbjct: 125 SGVTCFAEAGGQHVSEMARAVELLGLRACLVQSTMDSGQGLPPSWADRTTDDCIQSQKEL 184
Query: 197 YAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDT 256
Y KHH ADGRIRIW GIRQIMNATDRLLLETRD+A+E KTGIHMHVAEI YENQVV DT
Sbjct: 185 YEKHHDTADGRIRIWLGIRQIMNATDRLLLETRDVAKELKTGIHMHVAEISYENQVVKDT 244
Query: 257 RKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTE 289
RKVD+GTV++L+KI+ L NLL+AHTVWVN TE
Sbjct: 245 RKVDYGTVSYLEKIDLLNGNLLAAHTVWVNDTE 277
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|147857762|emb|CAN80808.1| hypothetical protein VITISV_008190 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 468 bits (1204), Expect = e-129, Method: Compositional matrix adjust.
Identities = 218/274 (79%), Positives = 241/274 (87%)
Query: 17 SSSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQ 76
SSS +LHNA+IVTMD E+RVF NG + V +DRI A+GQS +I QF+ +A + DL Q
Sbjct: 5 SSSVTLLHNALIVTMDSETRVFYNGAIVVEKDRIIALGQSHNIFNQFAPLAQNVFDLHGQ 64
Query: 77 ILLPGFVNTHVHTSQQLAKGIADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIH 136
ILLPGF+NTHVHTSQQL +GIADDVDLMTWLH+RIWPYESNMTEEDSYISTLLCGIELIH
Sbjct: 65 ILLPGFINTHVHTSQQLGRGIADDVDLMTWLHERIWPYESNMTEEDSYISTLLCGIELIH 124
Query: 137 SGVTCFAEAGGQHVSEMAKAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKEL 196
SGVTCFAEAGGQHVSEMA+AVELLGLRACLVQSTMD G+GLP SWA RTTDDCIQSQKEL
Sbjct: 125 SGVTCFAEAGGQHVSEMARAVELLGLRACLVQSTMDSGQGLPPSWADRTTDDCIQSQKEL 184
Query: 197 YAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDT 256
Y KHH ADGRIRIW GIRQIMNATDRLLLETRD+A+E KTGIHMHVAEI YENQVV DT
Sbjct: 185 YEKHHDTADGRIRIWLGIRQIMNATDRLLLETRDVAKELKTGIHMHVAEISYENQVVKDT 244
Query: 257 RKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEV 290
RKVD+GTV +L+KI+ L NLL+AHTVWVN TE+
Sbjct: 245 RKVDYGTVAYLEKIDLLNGNLLAAHTVWVNDTEI 278
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449468824|ref|XP_004152121.1| PREDICTED: 5-methylthioadenosine/S-adenosylhomocysteine deaminase-like [Cucumis sativus] gi|449484683|ref|XP_004156951.1| PREDICTED: 5-methylthioadenosine/S-adenosylhomocysteine deaminase-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 467 bits (1201), Expect = e-129, Method: Compositional matrix adjust.
Identities = 220/274 (80%), Positives = 241/274 (87%)
Query: 18 SSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQI 77
+S +LHNA+I+TMD SRVFRNGG+ + D+IKAIG S++IL QFS A IIDL SQI
Sbjct: 21 NSLTLLHNALIITMDSHSRVFRNGGIVISGDKIKAIGHSSEILHQFSASAHHIIDLHSQI 80
Query: 78 LLPGFVNTHVHTSQQLAKGIADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHS 137
LLPGF+NTHVHTSQQLA+ IADDVDLMTWLH RIWPYESNMTEEDSYISTLLCGIELIHS
Sbjct: 81 LLPGFINTHVHTSQQLARSIADDVDLMTWLHHRIWPYESNMTEEDSYISTLLCGIELIHS 140
Query: 138 GVTCFAEAGGQHVSEMAKAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELY 197
GVTCFAEAGGQHVS MAKAVELLGLRACL QS MDCGEGLPA WA TTDDCIQSQKELY
Sbjct: 141 GVTCFAEAGGQHVSGMAKAVELLGLRACLTQSIMDCGEGLPAPWAAVTTDDCIQSQKELY 200
Query: 198 AKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTR 257
KHH+ ADGRIRIWFGIRQIMNATDRLL+ETRD A E +TGIHMHVAEI YENQ V++ R
Sbjct: 201 KKHHNTADGRIRIWFGIRQIMNATDRLLIETRDNALELETGIHMHVAEIAYENQKVINER 260
Query: 258 KVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEVN 291
KVDHGTVT+L+KI+FL NNLLSAHTVWVN E++
Sbjct: 261 KVDHGTVTYLEKIQFLGNNLLSAHTVWVNDNEIS 294
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|357152672|ref|XP_003576198.1| PREDICTED: 5-methylthioadenosine/S-adenosylhomocysteine deaminase-like isoform 1 [Brachypodium distachyon] | Back alignment and taxonomy information |
|---|
Score = 436 bits (1122), Expect = e-120, Method: Compositional matrix adjust.
Identities = 200/276 (72%), Positives = 240/276 (86%), Gaps = 1/276 (0%)
Query: 16 GSSSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQS 75
SS+ ++LHNA +VTMD V R+G V V+ DRI A+G SAD+L F + A Q +DL
Sbjct: 4 ASSADVVLHNAFVVTMDSADAVLRDGAVAVMGDRIAAVGPSADVLAAFPRAA-QTLDLAG 62
Query: 76 QILLPGFVNTHVHTSQQLAKGIADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELI 135
+IL+PGFVNTHVHTSQQLA+GIADDVDLMTWLH RIWPYES+MTEEDSY STLLC IELI
Sbjct: 63 RILIPGFVNTHVHTSQQLARGIADDVDLMTWLHGRIWPYESHMTEEDSYASTLLCCIELI 122
Query: 136 HSGVTCFAEAGGQHVSEMAKAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKE 195
SGVTCFAEAGGQ+VSEMA+AVELLGLRACL +STMDCG+GLP +W+ +TDDCIQSQK+
Sbjct: 123 RSGVTCFAEAGGQYVSEMARAVELLGLRACLTKSTMDCGDGLPPNWSSCSTDDCIQSQKD 182
Query: 196 LYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMD 255
LYAKHH+ ADGRIRIWFG+RQIMNATDRLLLETRD+A+E TGIHMH+AEIP+ENQ+VM
Sbjct: 183 LYAKHHNTADGRIRIWFGLRQIMNATDRLLLETRDVAQELNTGIHMHIAEIPHENQLVMR 242
Query: 256 TRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEVN 291
T+ +DHGTVT+L+KI+FL++NLL+AH+VW+N E+N
Sbjct: 243 TKGIDHGTVTYLEKIDFLRSNLLAAHSVWLNEPEIN 278
|
Source: Brachypodium distachyon Species: Brachypodium distachyon Genus: Brachypodium Family: Poaceae Order: Poales Class: Liliopsida Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|115488528|ref|NP_001066751.1| Os12g0468600 [Oryza sativa Japonica Group] gi|77555621|gb|ABA98417.1| Amidohydrolase family protein, expressed [Oryza sativa Japonica Group] gi|108862664|gb|ABG22018.1| Amidohydrolase family protein, expressed [Oryza sativa Japonica Group] gi|113649258|dbj|BAF29770.1| Os12g0468600 [Oryza sativa Japonica Group] gi|215686380|dbj|BAG87641.1| unnamed protein product [Oryza sativa Japonica Group] gi|215713483|dbj|BAG94620.1| unnamed protein product [Oryza sativa Japonica Group] gi|222617055|gb|EEE53187.1| hypothetical protein OsJ_36050 [Oryza sativa Japonica Group] | Back alignment and taxonomy information |
|---|
Score = 423 bits (1087), Expect = e-116, Method: Compositional matrix adjust.
Identities = 193/269 (71%), Positives = 230/269 (85%), Gaps = 1/269 (0%)
Query: 22 ILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPG 81
+LH V+V+MD RVF++G V V DRI A+G SAD+L F A +DL +ILLPG
Sbjct: 13 VLHGGVVVSMDGGFRVFQDGAVAVAGDRIAAVGPSADVLSSFPGAA-ATVDLAGRILLPG 71
Query: 82 FVNTHVHTSQQLAKGIADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTC 141
FVNTHVHTSQQLA+GIADDVDLM WLH RIWPYES+MTEEDSY STLLCGIELI SGVTC
Sbjct: 72 FVNTHVHTSQQLARGIADDVDLMAWLHGRIWPYESHMTEEDSYASTLLCGIELIRSGVTC 131
Query: 142 FAEAGGQHVSEMAKAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYAKHH 201
FAEAGGQ+VSEMA+AVELLGLRACL +S MDCG+GLP +W+ +TDDCIQSQK+LY KHH
Sbjct: 132 FAEAGGQYVSEMARAVELLGLRACLTKSIMDCGDGLPPNWSSCSTDDCIQSQKDLYEKHH 191
Query: 202 HAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDH 261
+ ADGRIRIWFG+RQIMNATDRLLLETRD A++ TGIHMH+AEIPYEN++VM T+ +DH
Sbjct: 192 NTADGRIRIWFGLRQIMNATDRLLLETRDAAQKLNTGIHMHIAEIPYENELVMQTKGIDH 251
Query: 262 GTVTFLDKIEFLQNNLLSAHTVWVNHTEV 290
GTVT+L+KI+FL++NLL+AH+VW+N E+
Sbjct: 252 GTVTYLEKIDFLRSNLLAAHSVWLNKPEI 280
|
Source: Oryza sativa Japonica Group Species: Oryza sativa Genus: Oryza Family: Poaceae Order: Poales Class: Liliopsida Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|226502244|ref|NP_001149944.1| LOC100283572 [Zea mays] gi|195635661|gb|ACG37299.1| amidohydrolase family protein [Zea mays] | Back alignment and taxonomy information |
|---|
Score = 421 bits (1082), Expect = e-115, Method: Compositional matrix adjust.
Identities = 194/269 (72%), Positives = 230/269 (85%), Gaps = 1/269 (0%)
Query: 22 ILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPG 81
+ HNAVIVTMD RV ++G V V DRI A+G SAD+L F A Q +DL +I+LP
Sbjct: 10 VFHNAVIVTMDDAFRVLQDGAVAVAGDRIAAVGPSADVLAAFP-CAVQTLDLGGRIVLPE 68
Query: 82 FVNTHVHTSQQLAKGIADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTC 141
VNTHVHTSQQLA+GIADDVDLMTWLH RIWPYES+MTEEDSY STLLCGIELI SGVTC
Sbjct: 69 LVNTHVHTSQQLARGIADDVDLMTWLHGRIWPYESHMTEEDSYASTLLCGIELIRSGVTC 128
Query: 142 FAEAGGQHVSEMAKAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYAKHH 201
FAEAGGQ VSEMA+AVELLG RACL +STMDCG+GLP +W+ +TDDCIQSQKELY KHH
Sbjct: 129 FAEAGGQFVSEMARAVELLGFRACLTKSTMDCGDGLPPNWSCCSTDDCIQSQKELYEKHH 188
Query: 202 HAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDH 261
+ ADGRIRIWFG+RQIMNATDRLLLETRD+A++ TGIHMH+AEIPYENQ+++ T+ +DH
Sbjct: 189 NTADGRIRIWFGLRQIMNATDRLLLETRDIAQKLNTGIHMHIAEIPYENQLILRTKGIDH 248
Query: 262 GTVTFLDKIEFLQNNLLSAHTVWVNHTEV 290
GTVT+L+KI+FL++NLL+AH+VW+N E+
Sbjct: 249 GTVTYLEKIDFLRSNLLAAHSVWLNVPEI 277
|
Source: Zea mays Species: Zea mays Genus: Zea Family: Poaceae Order: Poales Class: Liliopsida Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|351721551|ref|NP_001237213.1| uncharacterized protein LOC100500128 [Glycine max] gi|255629396|gb|ACU15043.1| unknown [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 402 bits (1032), Expect = e-109, Method: Compositional matrix adjust.
Identities = 183/248 (73%), Positives = 215/248 (86%)
Query: 22 ILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPG 81
+LH +I+TMD+E RV+R+GG+ V D+IKAIGQSADIL +FS +AD I+DL ILLPG
Sbjct: 15 VLHGGMIITMDEEQRVYRDGGIVVEHDKIKAIGQSADILAEFSDVADSIVDLSGHILLPG 74
Query: 82 FVNTHVHTSQQLAKGIADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTC 141
F+NTHVH+SQQ+A+GIADDVDLMTWLH+RIWPYESNM+E+DSY+STLLCGIELIHSGVTC
Sbjct: 75 FINTHVHSSQQMARGIADDVDLMTWLHERIWPYESNMSEQDSYLSTLLCGIELIHSGVTC 134
Query: 142 FAEAGGQHVSEMAKAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYAKHH 201
FAEAGGQHVS MA+AV LLGLRACL QSTMD G GLP SWA RTT CIQSQK+ Y K+H
Sbjct: 135 FAEAGGQHVSGMARAVGLLGLRACLTQSTMDSGHGLPPSWATRTTHQCIQSQKDNYHKYH 194
Query: 202 HAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDH 261
+ A GRIRIWF IRQIMN+T RLL++TRD A + TGIHMHVAEIP+ENQ+VMD K+DH
Sbjct: 195 NTAQGRIRIWFAIRQIMNSTPRLLIQTRDAATQLNTGIHMHVAEIPHENQLVMDVHKIDH 254
Query: 262 GTVTFLDK 269
GTVT+LD+
Sbjct: 255 GTVTYLDR 262
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|253761793|ref|XP_002489271.1| hypothetical protein SORBIDRAFT_0011s011820 [Sorghum bicolor] gi|241947020|gb|EES20165.1| hypothetical protein SORBIDRAFT_0011s011820 [Sorghum bicolor] | Back alignment and taxonomy information |
|---|
Score = 398 bits (1023), Expect = e-108, Method: Compositional matrix adjust.
Identities = 186/249 (74%), Positives = 215/249 (86%), Gaps = 1/249 (0%)
Query: 22 ILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPG 81
+LHNAVIVT+D RV R+G V V DRI A+G SAD+L F A Q +DL +I+LPG
Sbjct: 34 VLHNAVIVTIDGALRVLRDGAVAVAGDRIAAVGPSADVLAAFP-CAVQTLDLGGRIVLPG 92
Query: 82 FVNTHVHTSQQLAKGIADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTC 141
VNTHVHTSQQLA+GIADDVDLMTWLH RIWPYES+MTEEDSY STLLCGIELI SGVTC
Sbjct: 93 LVNTHVHTSQQLARGIADDVDLMTWLHGRIWPYESHMTEEDSYASTLLCGIELIRSGVTC 152
Query: 142 FAEAGGQHVSEMAKAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYAKHH 201
FAEAGGQ VSEMA+AVELLGLRACL +STMDCG+GLP +W+ +TDDCIQSQKELY KHH
Sbjct: 153 FAEAGGQFVSEMARAVELLGLRACLTKSTMDCGDGLPPNWSCCSTDDCIQSQKELYEKHH 212
Query: 202 HAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDH 261
+ ADGRIRIWFG+RQIMNATDRLLLETRD+A++ TGIHMH+AEIPYENQ+++ T+ +DH
Sbjct: 213 NTADGRIRIWFGLRQIMNATDRLLLETRDVAQKLNTGIHMHIAEIPYENQLIVRTKGIDH 272
Query: 262 GTVTFLDKI 270
GTVT+L+KI
Sbjct: 273 GTVTYLEKI 281
|
Source: Sorghum bicolor Species: Sorghum bicolor Genus: Sorghum Family: Poaceae Order: Poales Class: Liliopsida Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 304 | ||||||
| ASPGD|ASPL0000035211 | 464 | AN3194 [Emericella nidulans (t | 0.911 | 0.596 | 0.296 | 1.1e-34 | |
| TIGR_CMR|CHY_0698 | 444 | CHY_0698 "amidohydrolase famil | 0.855 | 0.585 | 0.315 | 9.8e-32 | |
| POMBASE|SPAC1F8.04c | 463 | SPAC1F8.04c "hydrolase (predic | 0.848 | 0.557 | 0.271 | 4.8e-25 | |
| UNIPROTKB|Q81S14 | 435 | mtaD "5-methylthioadenosine/S- | 0.822 | 0.574 | 0.292 | 1.3e-23 | |
| TIGR_CMR|BA_1865 | 435 | BA_1865 "chlorohydrolase famil | 0.822 | 0.574 | 0.292 | 1.3e-23 | |
| UNIPROTKB|Q48FM5 | 443 | PSPPH_3669 "Hydrolase, Atz/Trz | 0.838 | 0.575 | 0.293 | 5.6e-22 | |
| TIGR_CMR|CHY_1438 | 433 | CHY_1438 "amidohydrolase famil | 0.825 | 0.579 | 0.272 | 1.1e-19 | |
| DICTYBASE|DDB_G0285467 | 482 | DDB_G0285467 "putative amidohy | 0.766 | 0.483 | 0.274 | 1.2e-18 | |
| TIGR_CMR|CBU_0521 | 484 | CBU_0521 "chlorohydrolase fami | 0.838 | 0.526 | 0.244 | 3.4e-18 | |
| UNIPROTKB|Q46812 | 442 | ssnA [Escherichia coli K-12 (t | 0.894 | 0.615 | 0.224 | 5.7e-08 |
| ASPGD|ASPL0000035211 AN3194 [Emericella nidulans (taxid:162425)] | Back alignment and assigned GO terms |
|---|
Score = 376 (137.4 bits), Expect = 1.1e-34, P = 1.1e-34
Identities = 87/293 (29%), Positives = 156/293 (53%)
Query: 21 MILHNAVIVTMDKESRVFRNGGVFVVQ--DRIKAIGQSADILQQFSQMADQIIDLQSQIL 78
M+ +A I+T+D R+ +G ++V + +RI ++G++A +L Q+ ++ DL +I+
Sbjct: 1 MLFTHATILTLDSTRRIITDGAIYVPRGSNRISSLGKTAALLAQYPD--EEKYDLTGRIV 58
Query: 79 LPGFVNTHVHTSQQLAKGIADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSG 138
+PG V+TH+HT+Q L +G ADD++L++WL +RIW + N T++D Y + L E++ SG
Sbjct: 59 IPGLVSTHMHTAQTLLRGTADDLELVSWLCERIWVLQGNFTKDDGYAAARLSIAEMLKSG 118
Query: 139 VTCFAEA--GGQHVSE-MAKAVELLGLRACLVQSTMDCGE-GLPASWA-----VRTTDDC 189
TCF E+ ++ E + +AV G+R CL + MD G +WA + +
Sbjct: 119 TTCFLESMFADRYGFEGLCQAVAESGIRGCLGKIVMDKGTYAADDAWAMHPGLIEDRETS 178
Query: 190 IQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYE 249
+ +++ K + AD RIR+WFG R +D L E ++RE I MH AE+ +
Sbjct: 179 LLGTVKMWEKWNGKADDRIRVWFGARTPGGVSDELYREMTAISREKNIPITMHCAEVKAD 238
Query: 250 NQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEVNCTFGNFKYAVH 302
V H +T+ + L + + H V ++ +++ + + H
Sbjct: 239 RAFF---GSVGHTPMTYCSSVGLLSPSTVLVHMVHLDDRDISLLSESGTHVAH 288
|
|
| TIGR_CMR|CHY_0698 CHY_0698 "amidohydrolase family protein" [Carboxydothermus hydrogenoformans Z-2901 (taxid:246194)] | Back alignment and assigned GO terms |
|---|
Score = 348 (127.6 bits), Expect = 9.8e-32, P = 9.8e-32
Identities = 86/273 (31%), Positives = 144/273 (52%)
Query: 20 TMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILL 79
++++ N IVTM+++ + + G +++ + IK IG S D+ D++ID ++++
Sbjct: 2 SILIKNGTIVTMNEKREILK-GDLYIEGNIIKDIGPSLDV------QTDKVIDAAGKVVI 54
Query: 80 PGFVNTHVHTSQQLAKGIADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGI-ELIHSG 138
PG + TH+H Q L +G ADD++L+ WL RIWP E E Y S +L GI EL G
Sbjct: 55 PGLIQTHIHLCQTLFRGQADDLELLDWLKLRIWPLEGGHDPESLYYSAML-GIGELFKGG 113
Query: 139 VTCFAE-AGGQHVSEMAKAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELY 197
T + A H +A+ G+RA + MD G +P S TT++ I +L
Sbjct: 114 TTAIVDMATVNHTDSNFQAIYDSGIRAISGKCMMDYGTEVPKSMQ-DTTENAIDESVQLL 172
Query: 198 AKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTR 257
K H +GRI F R ++ T+ LL E +A ++K +H H +E E ++V+ R
Sbjct: 173 EKWHGKDNGRILYAFTPRFAVSCTEDLLKEVVKLAEQYKVRVHTHASENKGEVELVLKER 232
Query: 258 KVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEV 290
+ + V +L+K+ NL+ AH + ++ E+
Sbjct: 233 GMRN--VLYLEKLGMTAPNLILAHCIHLDEREM 263
|
|
| POMBASE|SPAC1F8.04c SPAC1F8.04c "hydrolase (predicted)" [Schizosaccharomyces pombe (taxid:4896)] | Back alignment and assigned GO terms |
|---|
Score = 288 (106.4 bits), Expect = 4.8e-25, P = 4.8e-25
Identities = 74/273 (27%), Positives = 131/273 (47%)
Query: 21 MILHNAVIVTMDKESRVFRNGGVFVVQ--DRIKAIGQSADILQQFSQMADQIIDLQSQIL 78
M+ +A I+T++ + +G + V + I IG++ ++ + + L+ I+
Sbjct: 1 MLYTHANIITVNPTRDILIDGAILVKDGSNTIDDIGKTDRLVSIYPNEKHK--SLEGHIV 58
Query: 79 LPGFVNTHVHTSQQLAKGIADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSG 138
+PG ++ HVH +Q L + ADD+ L++WL D +W + N T+ED Y+++ L E++ SG
Sbjct: 59 MPGLISLHVHLAQSLLRSAADDLPLISWLCDTVWKMQGNFTQEDGYVASQLTIAEMLKSG 118
Query: 139 VTCFAEA-GGQH--VSEMAKAVELLGLRACLVQSTMD-----CGEGLPASWAVRTTDDCI 190
T F EA Q + KAV G+R C+ + MD G+ + + +
Sbjct: 119 TTTFVEALFAQRYGIEGAVKAVIESGIRGCIGKVVMDQPRYATQTGVSMHEGLIENSNSL 178
Query: 191 QSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYEN 250
E ++K H +GR+ IWFG R ++ L + +AR GI MH AE+ +
Sbjct: 179 NQAVESHSKFHGKGNGRVEIWFGARTPGGVSEELYRKMVKIARANNIGITMHCAEVKADR 238
Query: 251 QVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTV 283
+ +H +T+ + L + AH V
Sbjct: 239 EFFASK---EHTPMTYCKDLGLLGPKTVLAHMV 268
|
|
| UNIPROTKB|Q81S14 mtaD "5-methylthioadenosine/S-adenosylhomocysteine deaminase" [Bacillus anthracis (taxid:1392)] | Back alignment and assigned GO terms |
|---|
Score = 274 (101.5 bits), Expect = 1.3e-23, P = 1.3e-23
Identities = 79/270 (29%), Positives = 126/270 (46%)
Query: 25 NAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVN 84
NA IVTM++++ V NG + V D+I + S + F D++ID++ + +LPG VN
Sbjct: 7 NATIVTMNEQNEVIENGYIIVENDKIIDVN-SGEFASDFE--VDEVIDMKGKWVLPGLVN 63
Query: 85 THVHTSQQLAKGIADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAE 144
TH H L +GI DD+ L WL RIWP ES T E + ST L +E++ SG T F++
Sbjct: 64 THTHVVMSLLRGIGDDMLLQPWLETRIWPLESQFTPELAVASTELGLLEMVKSGTTSFSD 123
Query: 145 AG---GQHVSEMAKAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYAKHH 201
G + + V G+RA + ++ G A+ + E Y K +
Sbjct: 124 MFNPIGVDQDAIMETVSRSGMRAAVSRTLFSFGTQEDEKKAIE--------EAEKYVKRY 175
Query: 202 HAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDH 261
+ G + + LL E +A E +T +H+H++E E V D + +
Sbjct: 176 YNESGMLTTMVAPHSPYTCSTELLEECARIAVENQTMVHIHLSETERE---VRDI-EAQY 231
Query: 262 GT--VTFLDKIEFLQNNLLSAHTVWVNHTE 289
G V ++ + + AH V +N E
Sbjct: 232 GKRPVEYVASCGLFKRPTVIAHGVVLNDNE 261
|
|
| TIGR_CMR|BA_1865 BA_1865 "chlorohydrolase family protein" [Bacillus anthracis str. Ames (taxid:198094)] | Back alignment and assigned GO terms |
|---|
Score = 274 (101.5 bits), Expect = 1.3e-23, P = 1.3e-23
Identities = 79/270 (29%), Positives = 126/270 (46%)
Query: 25 NAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVN 84
NA IVTM++++ V NG + V D+I + S + F D++ID++ + +LPG VN
Sbjct: 7 NATIVTMNEQNEVIENGYIIVENDKIIDVN-SGEFASDFE--VDEVIDMKGKWVLPGLVN 63
Query: 85 THVHTSQQLAKGIADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAE 144
TH H L +GI DD+ L WL RIWP ES T E + ST L +E++ SG T F++
Sbjct: 64 THTHVVMSLLRGIGDDMLLQPWLETRIWPLESQFTPELAVASTELGLLEMVKSGTTSFSD 123
Query: 145 AG---GQHVSEMAKAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYAKHH 201
G + + V G+RA + ++ G A+ + E Y K +
Sbjct: 124 MFNPIGVDQDAIMETVSRSGMRAAVSRTLFSFGTQEDEKKAIE--------EAEKYVKRY 175
Query: 202 HAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDH 261
+ G + + LL E +A E +T +H+H++E E V D + +
Sbjct: 176 YNESGMLTTMVAPHSPYTCSTELLEECARIAVENQTMVHIHLSETERE---VRDI-EAQY 231
Query: 262 GT--VTFLDKIEFLQNNLLSAHTVWVNHTE 289
G V ++ + + AH V +N E
Sbjct: 232 GKRPVEYVASCGLFKRPTVIAHGVVLNDNE 261
|
|
| UNIPROTKB|Q48FM5 PSPPH_3669 "Hydrolase, Atz/Trz family" [Pseudomonas syringae pv. phaseolicola 1448A (taxid:264730)] | Back alignment and assigned GO terms |
|---|
Score = 260 (96.6 bits), Expect = 5.6e-22, P = 5.6e-22
Identities = 80/273 (29%), Positives = 129/273 (47%)
Query: 21 MILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLP 80
++L A +V ++ V ++ G+ V I IG + L+Q A Q+ +L +L P
Sbjct: 10 LLLLPAWLVPVEPAGVVLKDHGIGVRDGCIVYIGPRTEALRQ---NAVQVQELPGMLLSP 66
Query: 81 GFVNTHVHTSQQLAKGIADDVDLMTWLHDRIWPYESNMTEEDSYI--STLLCGIELIHSG 138
G +N H H + L +G+ADD+ LMTWL D IWP E ED ++ T L E + G
Sbjct: 67 GLINAHGHAAMTLFRGLADDLPLMTWLQDHIWPAEGKWVNED-FVRDGTDLAIAEQLKGG 125
Query: 139 VTCFAEAGGQHVSEMAKAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYA 198
+TCF++ + A+ V G+RA + +D P A TTD+ + + EL+
Sbjct: 126 ITCFSDMYF-YPKVAAERVHASGMRAQITVPVLD----FPIPGA-HTTDEALHNGIELFN 179
Query: 199 K-HHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTR 257
HH RI+I FG D L + R +A E I MHV E +E + ++ R
Sbjct: 180 DLAHHP---RIKIAFGPHAPYTVGDENLEKVRVIADELDAMIQMHVHETAFEVEQAVEQR 236
Query: 258 KVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEV 290
+ + L+++ L + H +N ++
Sbjct: 237 Q--ERPLARLNRLGMLGPRFQAVHMTQINDDDL 267
|
|
| TIGR_CMR|CHY_1438 CHY_1438 "amidohydrolase family protein" [Carboxydothermus hydrogenoformans Z-2901 (taxid:246194)] | Back alignment and assigned GO terms |
|---|
Score = 239 (89.2 bits), Expect = 1.1e-19, P = 1.1e-19
Identities = 75/275 (27%), Positives = 132/275 (48%)
Query: 20 TMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILL 79
T+++ N ++ ++K + V + + ++I IG ++ + + +IID +++ L
Sbjct: 6 TILIKNTTVLDLNKFAAV--ENDILIEGNKISKIGVDIEVNDKENL---KIIDGSNKVAL 60
Query: 80 PGFVNTHVHTSQQLAKGIADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGV 139
PG +N H H + L +G +DD+ LM WL++ IWP ES +T ED Y +LL +E+I SG
Sbjct: 61 PGLINGHTHVAMTLFRGASDDLPLMDWLNNVIWPSESRLTGEDVYWGSLLGIVEMIKSGT 120
Query: 140 TCFAEAGGQHVSEMAKAVELLGLRACLVQS--TMDCGEGLPASWAVRTTDDCIQSQKELY 197
T F + + E+A AVE G+RA L + +D G ++ + D I+
Sbjct: 121 TTFCDMYF-FMDEVAHAVEQSGIRAILSRGMVALDPENG---EKGLKESIDFIE------ 170
Query: 198 AKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTR 257
K A+GRI L + A+ I++H++E E ++
Sbjct: 171 -KWQGKANGRITTALAPHAPYTCPPEFLKDVIWEAKRLNVPINIHISETLDEISII---- 225
Query: 258 KVDHGT--VTFLDKIEFLQNNLLSAHTVWVNHTEV 290
K +GT V L+ + + + AH V V+ E+
Sbjct: 226 KERYGTTPVRHLESLGLFEVKTIGAHLVHVDDEEI 260
|
|
| DICTYBASE|DDB_G0285467 DDB_G0285467 "putative amidohydrolase" [Dictyostelium discoideum (taxid:44689)] | Back alignment and assigned GO terms |
|---|
Score = 231 (86.4 bits), Expect = 1.2e-18, P = 1.2e-18
Identities = 68/248 (27%), Positives = 120/248 (48%)
Query: 58 DILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIADDVDLMTWLHDRIWPYES- 116
D+ + S + I IL PGF+N H H++ L +G ADDV L WL IWP E+
Sbjct: 72 DLKEMNSDTSSSISSTSEYILAPGFINMHTHSAMSLLRGYADDVSLHDWLTKFIWPAEAQ 131
Query: 117 NMTEEDSYISTLLCGIELIHSGVTCFAEAGGQHVSEM-AKAVELLGLRACLVQSTMDCGE 175
++ EE + T L +E+I +G TC + + E+ A+ VE G+RA L +
Sbjct: 132 HVGEEFVKVGTELACLEMIKTGTTCCNDM--YYYPEVSAQVVEQFGMRATLAAPIIK--- 186
Query: 176 GLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREF 235
P +A ++ + I+ +L K+ + +I+I G + TD L+ ++++ ++
Sbjct: 187 -FPTVYA-QSEQEYIEKGIQLIEKYKDHS--KIKISLGPHAVYTITDEAYLKVKELSEKY 242
Query: 236 KTGIHMHVAEIPYENQVVMDTRKVD-HGTVTFLDKIEFLQNNLLSAHTVWVNHTEVNCTF 294
IH H+ E +E V + KV + L + L ++L++AH + +++ T
Sbjct: 243 GVKIHTHLHETTHE---VSEEVKVSGKRPIERLRDLGVLSSSLIAAHMTQLTSEDLDLTA 299
Query: 295 GNFKYAVH 302
+ VH
Sbjct: 300 KSGINVVH 307
|
|
| TIGR_CMR|CBU_0521 CBU_0521 "chlorohydrolase family protein" [Coxiella burnetii RSA 493 (taxid:227377)] | Back alignment and assigned GO terms |
|---|
Score = 227 (85.0 bits), Expect = 3.4e-18, P = 3.4e-18
Identities = 66/270 (24%), Positives = 115/270 (42%)
Query: 35 SRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLA 94
+++ N + V + I + A+ ++++ ADQ ++L ++LPG VN H HT L
Sbjct: 53 NQILENFALAVRDEYIVDLLPQAEANKKYT--ADQHLELNDHVVLPGLVNAHTHTPMNLF 110
Query: 95 KGIADDVDLMTWLHDRIWPYESNMTEEDSY-ISTLLCGIELIHSGVTCFAEAGGQHVSEM 153
+G+ADD+ L+ WL + IWP E + +S T L E++ G TCF + H +
Sbjct: 111 RGLADDLQLLDWLQNHIWPAEKALINAESVRAGTRLAIAEMLRGGTTCFNDHYFFH-DTI 169
Query: 154 AKAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIW-F 212
AKA G+RA + M +P WA ++Q+ L +H+ + W
Sbjct: 170 AKAASEAGMRALIGVVIMS----VPTEWASDEKAYLARAQETLEKAENHS----LITWAL 221
Query: 213 GIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEF 272
+D E + +A + IH+H+ E E + + + L +
Sbjct: 222 APHAPYTVSDTAFKEIKKLAEYYDLPIHIHLHETKVE--IEQGLKSYGKRPLAHLHDLGL 279
Query: 273 LQNNLLSAHTVWVNHTEVNCTFGNFKYAVH 302
L L++ H + E+ VH
Sbjct: 280 LSQRLIAVHMTQLTSEEIKLVADTQTNIVH 309
|
|
| UNIPROTKB|Q46812 ssnA [Escherichia coli K-12 (taxid:83333)] | Back alignment and assigned GO terms |
|---|
Score = 150 (57.9 bits), Expect = 5.7e-08, P = 5.7e-08
Identities = 66/294 (22%), Positives = 123/294 (41%)
Query: 21 MILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLP 80
+IL N V + ++V + + D I AIG + + Q++ + + ++ +I++P
Sbjct: 2 LILKNVTAVQLHP-AKVQEGVDIAIENDVIVAIGDA--LTQRYPDASFK--EMHGRIVMP 56
Query: 81 GFVNTHVHTSQQLAKGIADDV----DLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIH 136
G V +H H L++GI ++ D ++ L + W + + EE Y S L+C +E I
Sbjct: 57 GIVCSHNHFYSGLSRGIMANIAPCPDFISTLKNLWWRLDRALDEESLYYSGLICSLEAIK 116
Query: 137 SGVTCF-------AEAGGQHVSEMAKAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDC 189
SG T A GG +S + A +GLRA T D G+ ++
Sbjct: 117 SGCTSVIDHHASPAYIGGS-LSTLRDAFLKVGLRAMTCFETTDRNNGIKE--LQEGVEEN 173
Query: 190 IQSQKEL-YAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPY 248
I+ + + AK + + G D L R+ + G+H+H AE Y
Sbjct: 174 IRFARLIDEAKKATSEPYLVEAHIGAHAPFTVPDAGLEMLREAVKATGRGLHIHAAEDLY 233
Query: 249 ENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEVNCTFGNFKYAVH 302
+ V + L + + + + L AH ++++ ++ + VH
Sbjct: 234 D--VSYSHHWYGKDLLARLAQFDLIDSKTLVAHGLYLSKDDITLLNQRDAFLVH 285
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries 
Original result of BLAST against SWISS-PROT
No confident hit for EC number transfering in SWISSPROT detected by BLAST
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 304 | |||
| cd01298 | 411 | cd01298, ATZ_TRZ_like, TRZ/ATZ family contains enz | 1e-79 | |
| PRK07228 | 445 | PRK07228, PRK07228, N-ethylammeline chlorohydrolas | 1e-57 | |
| PRK06038 | 430 | PRK06038, PRK06038, N-ethylammeline chlorohydrolas | 3e-49 | |
| COG0402 | 421 | COG0402, SsnA, Cytosine deaminase and related meta | 1e-39 | |
| PRK06380 | 418 | PRK06380, PRK06380, metal-dependent hydrolase; Pro | 2e-36 | |
| PRK08393 | 424 | PRK08393, PRK08393, N-ethylammeline chlorohydrolas | 6e-34 | |
| PRK09045 | 443 | PRK09045, PRK09045, N-ethylammeline chlorohydrolas | 3e-30 | |
| PRK08203 | 451 | PRK08203, PRK08203, hydroxydechloroatrazine ethyla | 2e-27 | |
| PRK15493 | 435 | PRK15493, PRK15493, 5-methylthioadenosine/S-adenos | 6e-27 | |
| PRK06687 | 419 | PRK06687, PRK06687, chlorohydrolase; Validated | 2e-26 | |
| PRK07203 | 442 | PRK07203, PRK07203, putative chlorohydrolase/amino | 4e-26 | |
| TIGR03314 | 441 | TIGR03314, Se_ssnA, putative selenium metabolism p | 4e-24 | |
| PRK08204 | 449 | PRK08204, PRK08204, hypothetical protein; Provisio | 7e-17 | |
| PRK12393 | 457 | PRK12393, PRK12393, amidohydrolase; Provisional | 1e-13 | |
| TIGR02967 | 401 | TIGR02967, guan_deamin, guanine deaminase | 2e-10 | |
| COG1574 | 535 | COG1574, COG1574, Predicted metal-dependent hydrol | 2e-09 | |
| cd01303 | 429 | cd01303, GDEase, Guanine deaminase (GDEase) | 3e-09 | |
| PRK06151 | 488 | PRK06151, PRK06151, N-ethylammeline chlorohydrolas | 2e-08 | |
| PRK09356 | 406 | PRK09356, PRK09356, imidazolonepropionase; Validat | 2e-08 | |
| PRK09228 | 433 | PRK09228, PRK09228, guanine deaminase; Provisional | 9e-08 | |
| cd00854 | 374 | cd00854, NagA, N-acetylglucosamine-6-phosphate dea | 1e-06 | |
| pfam13594 | 66 | pfam13594, Amidohydro_5, Amidohydrolase | 1e-06 | |
| cd01300 | 479 | cd01300, YtcJ_like, YtcJ_like metal dependent amid | 8e-06 | |
| COG0044 | 430 | COG0044, PyrC, Dihydroorotase and related cyclic a | 3e-05 | |
| PRK08418 | 408 | PRK08418, PRK08418, chlorohydrolase; Provisional | 3e-05 | |
| COG1820 | 380 | COG1820, NagA, N-acetylglucosamine-6-phosphate dea | 8e-05 | |
| PRK09357 | 423 | PRK09357, pyrC, dihydroorotase; Validated | 1e-04 | |
| PRK13404 | 477 | PRK13404, PRK13404, dihydropyrimidinase; Provision | 3e-04 | |
| COG1228 | 406 | COG1228, HutI, Imidazolonepropionase and related a | 3e-04 | |
| PRK14085 | 382 | PRK14085, PRK14085, imidazolonepropionase; Provisi | 4e-04 | |
| PRK09236 | 444 | PRK09236, PRK09236, dihydroorotase; Reviewed | 4e-04 | |
| PRK15446 | 383 | PRK15446, PRK15446, phosphonate metabolism protein | 5e-04 | |
| PRK10657 | 388 | PRK10657, PRK10657, isoaspartyl dipeptidase; Provi | 7e-04 | |
| cd01296 | 371 | cd01296, Imidazolone-5PH, Imidazolonepropionase/im | 7e-04 | |
| PRK05985 | 391 | PRK05985, PRK05985, cytosine deaminase; Provisiona | 7e-04 | |
| TIGR03178 | 443 | TIGR03178, allantoinase, allantoinase | 0.001 | |
| cd01315 | 447 | cd01315, L-HYD_ALN, L-Hydantoinases (L-HYDs) and A | 0.003 | |
| cd01314 | 447 | cd01314, D-HYD, D-hydantoinases (D-HYD) also calle | 0.003 | |
| cd01308 | 387 | cd01308, Isoaspartyl-dipeptidase, Isoaspartyl dipe | 0.004 |
| >gnl|CDD|238623 cd01298, ATZ_TRZ_like, TRZ/ATZ family contains enzymes from the atrazine degradation pathway and related hydrolases | Back alignment and domain information |
|---|
Score = 247 bits (632), Expect = 1e-79
Identities = 96/273 (35%), Positives = 148/273 (54%), Gaps = 15/273 (5%)
Query: 21 MILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLP 80
+++ N IVT D RV +G V V RI A+G + + AD++ID + ++++P
Sbjct: 1 ILIRNGTIVTTD-PRRVLEDGDVLVEDGRIVAVGPAL---PLPAYPADEVIDAKGKVVMP 56
Query: 81 GFVNTHVHTSQQLAKGIADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVT 140
G VNTH H + L +G+ADD+ LM WL D IWP E +TEED Y+ LL E+I SG T
Sbjct: 57 GLVNTHTHLAMTLLRGLADDLPLMEWLKDLIWPLERLLTEEDVYLGALLALAEMIRSGTT 116
Query: 141 CFAEAGGQHVSEMAKAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYAKH 200
FA+ + +A+A E LG+RA L + MD G V T++ + + L +
Sbjct: 117 TFADMYFFYPDAVAEAAEELGIRAVLGRGIMDLGTE-----DVEETEEALAEAERLIREW 171
Query: 201 HHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVD 260
H AADGRIR+ +D LL E ++ARE+ +H+H+AE E ++
Sbjct: 172 HGAADGRIRVALAPHAPYTCSDELLREVAELAREYGVPLHIHLAETEDE----VEESLEK 227
Query: 261 HG--TVTFLDKIEFLQNNLLSAHTVWVNHTEVN 291
+G V +L+++ L +++ AH VW+ E+
Sbjct: 228 YGKRPVEYLEELGLLGPDVVLAHCVWLTDEEIE 260
|
Atrazine, a chlorinated herbizide, can be catabolized by a variety of different bacteria. The first three steps of the atrazine dehalogenation pathway are catalyzed by atrazine chlorohydrolase (AtzA), hydroxyatrazine ethylaminohydrolase (AtzB), and N-isopropylammelide N-isopropylaminohydrolase (AtzC). All three enzymes belong to the superfamily of metal dependent hydrolases. AtzA and AtzB, beside other related enzymes are represented in this CD. Length = 411 |
| >gnl|CDD|180895 PRK07228, PRK07228, N-ethylammeline chlorohydrolase; Provisional | Back alignment and domain information |
|---|
Score = 191 bits (487), Expect = 1e-57
Identities = 93/272 (34%), Positives = 142/272 (52%), Gaps = 10/272 (3%)
Query: 19 STMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQIL 78
T+++ NA IVTM+ R +G V + DRI A+G D+ + D ID +++
Sbjct: 1 MTILIKNAGIVTMN-AKREIVDGDVLIEDDRIAAVGDRLDL-----EDYDDHIDATGKVV 54
Query: 79 LPGFVNTHVHTSQQLAKGIADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSG 138
+PG + H+H Q L +GIADD++L+ WL DRIWP E+ E Y S LL ELI SG
Sbjct: 55 IPGLIQGHIHLCQTLFRGIADDLELLDWLKDRIWPLEAAHDAESMYYSALLGIGELIESG 114
Query: 139 VTCFAEAGGQHVSEMA-KAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELY 197
T + H ++ A +A G+RA L + MD G+ +P T+ + L
Sbjct: 115 TTTIVDMESVHHTDSAFEAAGESGIRAVLGKVMMDYGDDVPEGLQ-EDTEASLAESVRLL 173
Query: 198 AKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTR 257
K H A +GRIR F R ++ T+ LL RD+A E+ IH H +E E + V +
Sbjct: 174 EKWHGADNGRIRYAFTPRFAVSCTEELLRGVRDLADEYGVRIHTHASENRGEIETVEEET 233
Query: 258 KVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTE 289
+ + + +LD++ +L+ AH VW++ E
Sbjct: 234 GMRN--IHYLDEVGLTGEDLILAHCVWLDEEE 263
|
Length = 445 |
| >gnl|CDD|180363 PRK06038, PRK06038, N-ethylammeline chlorohydrolase; Provisional | Back alignment and domain information |
|---|
Score = 169 bits (429), Expect = 3e-49
Identities = 88/271 (32%), Positives = 142/271 (52%), Gaps = 18/271 (6%)
Query: 21 MILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLP 80
+I+ NA ++TMD + + G V + I + +S AD +ID + +++P
Sbjct: 4 IIIKNAYVLTMD--AGDLKKGSVVIEDGTITEVSEST------PGDADTVIDAKGSVVMP 55
Query: 81 GFVNTHVHTSQQLAKGIADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVT 140
G VNTH H + L +G ADD+ L WL+D IWP E+ +T ED Y +LL +E+I SG T
Sbjct: 56 GLVNTHTHAAMTLFRGYADDLPLAEWLNDHIWPAEAKLTAEDVYAGSLLACLEMIKSGTT 115
Query: 141 CFAEAGGQHVSEMAKAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYAKH 200
FA+ ++ E+AKAVE GLRA L G+ + ++ K +
Sbjct: 116 SFADM-YFYMDEVAKAVEESGLRAAL-------SYGMIDLGDDEKGEAELKEGKRFVKEW 167
Query: 201 HHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVD 260
H AADGRI++ +G ++ L + + +A + GIH+HV E E ++ +
Sbjct: 168 HGAADGRIKVMYGPHAPYTCSEEFLSKVKKLANKDGVGIHIHVLET--EAELNQMKEQYG 225
Query: 261 HGTVTFLDKIEFLQNNLLSAHTVWVNHTEVN 291
+V +LD I FL ++L+AH VW++ ++
Sbjct: 226 MCSVNYLDDIGFLGPDVLAAHCVWLSDGDIE 256
|
Length = 430 |
| >gnl|CDD|223479 COG0402, SsnA, Cytosine deaminase and related metal-dependent hydrolases [Nucleotide transport and metabolism / General function prediction only] | Back alignment and domain information |
|---|
Score = 143 bits (362), Expect = 1e-39
Identities = 77/276 (27%), Positives = 132/276 (47%), Gaps = 18/276 (6%)
Query: 18 SSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQI 77
+ +++ +++T D E R+ +G + + +I AIG +A+ +++ID + ++
Sbjct: 1 MTMLLIRGDLLLTNDPEGRI-EDGDLVIEDGKIVAIGANAEGPP-----DEEVIDAKGKL 54
Query: 78 LLPGFVNTHVHTSQQLAKGIADDVDLMTWLHDRIWPYESNM-TEEDSYISTLLCGIELIH 136
+LPGFVN H H Q L +G+ADD+ L+ WL +WP E+ + TEED Y LL +E++
Sbjct: 55 VLPGFVNAHTHLDQTLLRGLADDLPLLEWLERYVWPREARLLTEEDLYARALLALLEMLR 114
Query: 137 SGVTC---FAEAGGQHVSEMAKAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQ 193
+G T + + +A +GLRA L D P A TD+ ++
Sbjct: 115 NGTTTARTHVDVVAESADAAFEAALEVGLRAVLGPVLQD--VAFPDPGAE--TDEELEET 170
Query: 194 KELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVV 253
+EL + H GR + + LL ++AR++ +H+H+AE E V
Sbjct: 171 EELLREAHGL--GRDVVGLAPHFPYTVSPELLESLDELARKYGLPVHIHLAETLDE--VE 226
Query: 254 MDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTE 289
V LD + L ++ L AH V ++ E
Sbjct: 227 RVLEPYGARPVERLDLLGLLGSHTLLAHCVHLSEEE 262
|
Length = 421 |
| >gnl|CDD|180548 PRK06380, PRK06380, metal-dependent hydrolase; Provisional | Back alignment and domain information |
|---|
Score = 134 bits (338), Expect = 2e-36
Identities = 88/281 (31%), Positives = 144/281 (51%), Gaps = 41/281 (14%)
Query: 20 TMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILL 79
++++ NA IVT +++ + + G V++ ++I +G + AD IID ++++
Sbjct: 2 SILIKNAWIVTQNEKREILQ-GNVYIEGNKIVYVGDVNE-------EADYIIDATGKVVM 53
Query: 80 PGFVNTHVHTSQQLAKGIADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGV 139
PG +NTH H +KG+ DDVDL +L + + Y+S T E Y S L E+I+SG+
Sbjct: 54 PGLINTHAHVGMTASKGLFDDVDLEEFL-MKTFKYDSKRTREGIYNSAKLGMYEMINSGI 112
Query: 140 TCFAEAGGQHVSE--MAKAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQK--- 194
T F + + SE +AKA E LG+RA L SWA D+ I +QK
Sbjct: 113 TAFVDL---YYSEDIIAKAAEELGIRAFL-------------SWA--VLDEEITTQKGDP 154
Query: 195 ----ELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYEN 250
E + + H + + G++ I A D L+ +++A ++ T +HMH++E E
Sbjct: 155 LNNAENFIREHRNEE-LVTPSIGVQGIYVANDETYLKAKEIAEKYDTIMHMHLSETRKE- 212
Query: 251 QVVMDTRK-VDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEV 290
V D K V L+KI FL + L++AH VW + E+
Sbjct: 213 --VYDHVKRTGERPVEHLEKIGFLNSKLIAAHCVWATYHEI 251
|
Length = 418 |
| >gnl|CDD|181411 PRK08393, PRK08393, N-ethylammeline chlorohydrolase; Provisional | Back alignment and domain information |
|---|
Score = 127 bits (322), Expect = 6e-34
Identities = 75/271 (27%), Positives = 135/271 (49%), Gaps = 18/271 (6%)
Query: 20 TMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILL 79
++++ N ++ + +V R V + ++I + ++ ++ AD +ID ++
Sbjct: 2 SILIKNGYVIYGE-NLKVIR-ADVLIEGNKIVEVKRN------INKPADTVIDASGSVVS 53
Query: 80 PGFVNTHVHTSQQLAKGIADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGV 139
PGF+N H H+ L +G+ADDV LM WL + IWP E + +D Y L +E+I SG
Sbjct: 54 PGFINAHTHSPMVLLRGLADDVPLMEWLQNYIWPRERKLKRKDIYWGAYLGLLEMIKSGT 113
Query: 140 TCFAEAGGQHVSEMAKAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYAK 199
T F + H+ E+AKA +GLR L +D G+ ++ T+ ++ ++L +
Sbjct: 114 TTFVDMYF-HMEEVAKATLEVGLRGYLSYGMVDLGDEEKREKEIKETEKLMEFIEKLNSP 172
Query: 200 HHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKV 259
R+ FG + LL R+ ARE+ I +H++E E + + K
Sbjct: 173 -------RVHFVFGPHAPYTCSLALLKWVREKAREWNKLITIHLSETMDEIKQI--REKY 223
Query: 260 DHGTVTFLDKIEFLQNNLLSAHTVWVNHTEV 290
V LD+I FL ++++AH VW++ ++
Sbjct: 224 GKSPVVLLDEIGFLNEDVIAAHGVWLSSRDI 254
|
Length = 424 |
| >gnl|CDD|236366 PRK09045, PRK09045, N-ethylammeline chlorohydrolase; Provisional | Back alignment and domain information |
|---|
Score = 118 bits (297), Expect = 3e-30
Identities = 75/280 (26%), Positives = 124/280 (44%), Gaps = 31/280 (11%)
Query: 21 MILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLP 80
+++ IV ++ V + V + RI AI A+ +++ A + ++L +L+P
Sbjct: 9 LLIEARWIVPVEPAGVVLEDHAVAIRDGRIVAILPRAEARARYA--AAETVELPDHVLIP 66
Query: 81 GFVNTHVHTSQQLAKGIADDVDLMTWLHDRIWPYESNMTEEDS-YISTLLCGIELIHSGV 139
G +N H H + L +G+ADD+ LMTWL D IWP E E+ TLL E++ G
Sbjct: 67 GLINAHTHAAMSLLRGLADDLPLMTWLQDHIWPAEGAWVSEEFVRDGTLLAIAEMLRGGT 126
Query: 140 TCFAEAGGQHVSEM-------AKAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQS 192
TCF ++M A+A G+RA + +D P +WA D+ +
Sbjct: 127 TCF--------NDMYFFPEAAAEAAHQAGMRAQIGMPVLD----FPTAWA-SDADEYLAK 173
Query: 193 QKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQV 252
EL+ + H I F +D L R +A + IH+H+ E E
Sbjct: 174 GLELHDQWRH--HPLISTAFAPHAPYTVSDENLERIRTLAEQLDLPIHIHLHETAQE--- 228
Query: 253 VMDTRKVDHGT--VTFLDKIEFLQNNLLSAHTVWVNHTEV 290
+ D+ K HG + L ++ L L++ H + E+
Sbjct: 229 IADSLK-QHGQRPLARLARLGLLGPRLIAVHMTQLTDAEI 267
|
Length = 443 |
| >gnl|CDD|236184 PRK08203, PRK08203, hydroxydechloroatrazine ethylaminohydrolase; Reviewed | Back alignment and domain information |
|---|
Score = 110 bits (277), Expect = 2e-27
Identities = 66/249 (26%), Positives = 106/249 (42%), Gaps = 22/249 (8%)
Query: 18 SSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQI 77
++ I + IVTMD R +GG+ V RI +G + Q AD++ D + +
Sbjct: 1 TTLWIKNPLAIVTMDAARREIADGGLVVEGGRIVEVGPGGALPQP----ADEVFDARGHV 56
Query: 78 LLPGFVNTHVHTSQQLAKGI--ADDVDLMTWLHD--RIWPYESNMTEEDSYISTLLCGIE 133
+ PG VNTH H Q L + + A D +L WL +W + +T E ++T E
Sbjct: 57 VTPGLVNTHHHFYQTLTRALPAAQDAELFPWLTTLYPVW---ARLTPEMVRVATQTALAE 113
Query: 134 LIHSGVTC-------FAEAGGQHVSEMAKAVELLGLRACLVQSTMDCGE---GLPASWAV 183
L+ SG T F + + +A +G+R + +M GE GLP V
Sbjct: 114 LLLSGCTTSSDHHYLFPNGLRDALDDQIEAAREIGMRFHATRGSMSLGESDGGLPPDSVV 173
Query: 184 RTTDDCIQSQKELYAKHHHAADG-RIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMH 242
D + + L ++H G +RI + + L+ E+ +AR +H H
Sbjct: 174 EDEDAILADSQRLIDRYHDPGPGAMLRIALAPCSPFSVSRELMRESAALARRLGVRLHTH 233
Query: 243 VAEIPYENQ 251
+AE E
Sbjct: 234 LAETLDEEA 242
|
Length = 451 |
| >gnl|CDD|185390 PRK15493, PRK15493, 5-methylthioadenosine/S-adenosylhomocysteine deaminase; Provisional | Back alignment and domain information |
|---|
Score = 108 bits (272), Expect = 6e-27
Identities = 76/268 (28%), Positives = 123/268 (45%), Gaps = 16/268 (5%)
Query: 25 NAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVN 84
NA IVTM++++ V NG + V D+I + S + F D++ID++ + +LPG VN
Sbjct: 7 NATIVTMNEQNEVIENGYIIVENDQIIDV-NSGEFASDFE--VDEVIDMKGKWVLPGLVN 63
Query: 85 THVHTSQQLAKGIADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAE 144
TH H L +GI DD+ L WL RIWP ES T E + ST L +E++ SG T F++
Sbjct: 64 THTHVVMSLLRGIGDDMLLQPWLETRIWPLESQFTPELAVASTELGLLEMVKSGTTSFSD 123
Query: 145 AG---GQHVSEMAKAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYAKHH 201
G + + V G+RA + ++ G A+ + E Y K +
Sbjct: 124 MFNPIGVDQDAIMETVSRSGMRAAVSRTLFSFGTKEDEKKAIE--------EAEKYVKRY 175
Query: 202 HAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDH 261
+ G + + LL E +A E +T +H+H++E E + + +
Sbjct: 176 YNESGMLTTMVAPHSPYTCSTELLEECARIAVENQTMVHIHLSETEREVRDI--EAQYGK 233
Query: 262 GTVTFLDKIEFLQNNLLSAHTVWVNHTE 289
V + + + AH V +N E
Sbjct: 234 RPVEYAASCGLFKRPTVIAHGVVLNDNE 261
|
Length = 435 |
| >gnl|CDD|180657 PRK06687, PRK06687, chlorohydrolase; Validated | Back alignment and domain information |
|---|
Score = 107 bits (268), Expect = 2e-26
Identities = 70/272 (25%), Positives = 130/272 (47%), Gaps = 16/272 (5%)
Query: 22 ILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPG 81
+ + IVT D++ V+ +G + V +I +GQ F + A+QIID Q ++PG
Sbjct: 3 VFQHVNIVTCDQDFHVYLDGILAVKDSQIVYVGQDK---PAFLEQAEQIIDYQGAWIMPG 59
Query: 82 FVNTHVHTSQQLAKGIADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTC 141
VN H H++ +GI DD +L WL+D IWP ES T + + + E++ SG T
Sbjct: 60 LVNCHTHSAMTGLRGIRDDSNLHEWLNDYIWPAESEFTPDMTTNAVKEALTEMLQSGTTT 119
Query: 142 FAE---AGGQHVSEMAKAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYA 198
F + G + ++ + V+ +R C T+ E TT + I + +
Sbjct: 120 FNDMYNPNGVDIQQIYQVVKTSKMR-CYFSPTLFSSE-------TETTAETISRTRSIID 171
Query: 199 KHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRK 258
+ + ++ + + LL + +MA+E +H+HVAE E+ +++ ++
Sbjct: 172 EILKYKNPNFKVMVAPHSPYSCSRDLLEASLEMAKELNIPLHVHVAETKEESGIIL--KR 229
Query: 259 VDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEV 290
+ FL+++ +L + + AH V +N E+
Sbjct: 230 YGKRPLAFLEELGYLDHPSVFAHGVELNEREI 261
|
Length = 419 |
| >gnl|CDD|235963 PRK07203, PRK07203, putative chlorohydrolase/aminohydrolase; Validated | Back alignment and domain information |
|---|
Score = 106 bits (267), Expect = 4e-26
Identities = 75/291 (25%), Positives = 132/291 (45%), Gaps = 43/291 (14%)
Query: 21 MILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLP 80
+++ N +T D V +G + + + I IG + ++ ++ + ID + ++++P
Sbjct: 2 LLIGNGTAITRDPAKPVIEDGAIAIEGNVIVEIGTTDELKAKYPD--AEFIDAKGKLIMP 59
Query: 81 GFVNTHVHTSQQLAKGIADDV----DLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIH 136
G +N+H H LA+G+ ++ D ++ L + W + +T ED Y S L+C +E I
Sbjct: 60 GLINSHNHIYSGLARGMMANIPPPPDFISILKNLWWRLDRALTLEDVYYSALICSLEAIK 119
Query: 137 SGVTC-------FAEAGGQHVSEMAKAVELLGLRACLVQSTMDCGEGLPASWAVRTTD-D 188
+GVT GG + +A A + +GLRA L C E T+D D
Sbjct: 120 NGVTTVFDHHASPNYIGGS-LFTIADAAKKVGLRAML------CYE---------TSDRD 163
Query: 189 CIQSQKE------LYAKHHHAADG-RIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHM 241
+ +E + KH A + FG+ +D L + R+ +E G H+
Sbjct: 164 GEKELQEGVEENIRFIKHIDEAKDDMVEAMFGLHASFTLSDATLEKCREAVKETGRGYHI 223
Query: 242 HVAEIPYENQVVMDTRKVDHGT--VTFLDKIEFLQNNLLSAHTVWVNHTEV 290
HVAE Y+ V D+ K +G V L L L+AH ++++ E+
Sbjct: 224 HVAEGIYD---VSDSHK-KYGKDIVERLADFGLLGEKTLAAHCIYLSDEEI 270
|
Length = 442 |
| >gnl|CDD|132357 TIGR03314, Se_ssnA, putative selenium metabolism protein SsnA | Back alignment and domain information |
|---|
Score = 101 bits (252), Expect = 4e-24
Identities = 69/282 (24%), Positives = 118/282 (41%), Gaps = 25/282 (8%)
Query: 21 MILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLP 80
+++ N V +D + G + + D IKA+G + ++ Q++ ID + ++++P
Sbjct: 1 LLIGNGTAVQLDPTRPIQEGGDIAIDGDVIKAVGPTEELKQKYP--EATFIDAKGKLIMP 58
Query: 81 GFVNTHVHTSQQLAKGIADDV----DLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIH 136
GF+NTH H A+G+ D+ D ++ L + W + +T ED Y S L+C ++ I
Sbjct: 59 GFINTHNHFYSTFARGMMADIPPPPDFISILKNLWWRLDRALTLEDVYYSGLICSLDAIK 118
Query: 137 SGVTC-------FAEAGGQHVSEMAKAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDC 189
SG T G +S + KA + GLR L T D G V
Sbjct: 119 SGCTTVIDHHASPNAITGS-LSTIRKAADEAGLRTMLCYETSDRDGGKEMQEGV------ 171
Query: 190 IQSQKELYAKHHHAADGR-IRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPY 248
+ + K + + G +D L R+ + G H+HVAE Y
Sbjct: 172 --EENIAFIKKSSGKEPYLVEAHIGAHAPFTVSDAGLEMCREAVQATGRGFHIHVAEDIY 229
Query: 249 ENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEV 290
+ V K V L L + L+AH ++++ E+
Sbjct: 230 D--VEDSHHKYGKDIVERLADFGLLGSKTLAAHCIYLSDREI 269
|
Members of this protein family are found exclusively in genomes that contain putative set of labile selenium-dependent enzyme accessory proteins as well as homologs of a labile selenium-dependent purine hydroxylase. A mutant in this gene in Escherichia coli had improved stationary phase viability. The function is unknown. Length = 441 |
| >gnl|CDD|181288 PRK08204, PRK08204, hypothetical protein; Provisional | Back alignment and domain information |
|---|
Score = 80.0 bits (198), Expect = 7e-17
Identities = 40/152 (26%), Positives = 67/152 (44%), Gaps = 17/152 (11%)
Query: 21 MILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLP 80
++ ++TMD G + + DRI A+ S + +++D + I++P
Sbjct: 4 TLIRGGTVLTMDPAIGDLPRGDILIEGDRIAAVAPSIE------APDAEVVDARGMIVMP 57
Query: 81 GFVNTHVHTSQQLAKGIADDVDLMT---WLHDRIWPYESNMTEEDSYISTLLCGIELIHS 137
G V+TH HT Q + +GI D L T +H + P ED YI+ LL +E + +
Sbjct: 58 GLVDTHRHTWQSVLRGIGADWTLQTYFREIHGNLGPM---FRPEDVYIANLLGALEALDA 114
Query: 138 GVT-----CFAEAGGQHVSEMAKAVELLGLRA 164
GVT +H + + G+RA
Sbjct: 115 GVTTLLDWSHINNSPEHADAAIRGLAEAGIRA 146
|
Length = 449 |
| >gnl|CDD|237088 PRK12393, PRK12393, amidohydrolase; Provisional | Back alignment and domain information |
|---|
Score = 70.5 bits (173), Expect = 1e-13
Identities = 70/297 (23%), Positives = 120/297 (40%), Gaps = 37/297 (12%)
Query: 17 SSSTMILHNAVIVTMDKESRVFRNGGVFVVQD-RIKAIGQSADILQQFSQMADQIIDLQS 75
S +I + A I+T G ++D RI AIG +++ID
Sbjct: 1 MPSLLIRNAAAIMTGLPGDAARLGGPDIRIRDGRIAAIGALT------PLPGERVIDATD 54
Query: 76 QILLPGFVNTHVHTSQQLAKGI--ADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIE 133
++ PG+VNTH H Q L KG+ + L WL + + + E+ ++ + +E
Sbjct: 55 CVVYPGWVNTHHHLFQSLLKGVPAGINQSLTAWLAAVPYRFRARFDEDLFRLAARIGLVE 114
Query: 134 LIHSGVTCFAE------AGGQHVSEMA--KAVELLGLRACL-----VQSTMDCGEGLPAS 180
L+ SG T A+ G + E LG+R L Q+ D GLP +
Sbjct: 115 LLRSGCTTVADHHYLYHPGMPFDTGDILFDEAEALGMRFVLCRGGATQTRGDHP-GLPTA 173
Query: 181 WAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIM-------NATDRLLLETRDMAR 233
T D + + L +++H A+ +R R ++ + LL E AR
Sbjct: 174 LRPETLDQMLADVERLVSRYHDASPDSLR-----RVVVAPTTPTFSLPPELLREVARAAR 228
Query: 234 EFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEV 290
+H H++E + V K V F+ + ++L ++ AH V ++ E+
Sbjct: 229 GMGLRLHSHLSET--VDYVDFCREKYGMTPVQFVAEHDWLGPDVWFAHLVKLDAEEI 283
|
Length = 457 |
| >gnl|CDD|132012 TIGR02967, guan_deamin, guanine deaminase | Back alignment and domain information |
|---|
Score = 60.7 bits (148), Expect = 2e-10
Identities = 56/269 (20%), Positives = 107/269 (39%), Gaps = 26/269 (9%)
Query: 36 RVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQ--QL 93
F +G + V RI A+G A++ + +I D + +++PGF++TH+H Q +
Sbjct: 2 EYFEDGLLVVENGRIVAVGDYAELKETLPA-GVEIDDYRGHLIMPGFIDTHIHYPQTEMI 60
Query: 94 AKGIADDVDLMTWLHDRIWPYESNMTEED--SYISTLLCGIELIHSGVTC---FAEAGGQ 148
A + L+ WL +P E+ + D ++ EL+ +G T FA +
Sbjct: 61 A---SYGEQLLEWLEKYTFPTEARFADPDHAEEVAEFFLD-ELLRNGTTTALVFATVHPE 116
Query: 149 HVSEMAKAVELLGLRACLVQSTMD--CGEGLPASWAVRTTDDCIQSQKELYAKHHHAADG 206
V + +A G+R + MD + L T + K L + H G
Sbjct: 117 SVDALFEAALKRGMRMIAGKVLMDRNAPDYL-----RDTAESSYDESKALIERWH----G 167
Query: 207 RIRIWFGI--RQIMNATDRLLLETRDMAREFK-TGIHMHVAEIPYENQVVMDTRKVDHGT 263
+ R+ + + R ++ L ++A+E+ + H++E E V +
Sbjct: 168 KGRLLYAVTPRFAPTSSPEQLAAAGELAKEYPDVYVQTHLSENKDEIAWVKELFPEAKDY 227
Query: 264 VTFLDKIEFLQNNLLSAHTVWVNHTEVNC 292
+ D L + AH + ++ E
Sbjct: 228 LDVYDHYGLLGRRSVFAHCIHLSDEECQR 256
|
This model describes guanine deaminase, which hydrolyzes guanine to xanthine and ammonia. Xanthine can then be converted to urate by xanthine dehydrogenase, and urate subsequently degraded. In some bacteria, the guanine deaminase gene is found near the xdhABC genes for xanthine dehydrogenase. Non-homologous forms of guanine deaminase also exist, as well as distantly related forms outside the scope of this model [Purines, pyrimidines, nucleosides, and nucleotides, Other]. Length = 401 |
| >gnl|CDD|224490 COG1574, COG1574, Predicted metal-dependent hydrolase with the TIM-barrel fold [General function prediction only] | Back alignment and domain information |
|---|
Score = 58.1 bits (141), Expect = 2e-09
Identities = 25/71 (35%), Positives = 40/71 (56%), Gaps = 3/71 (4%)
Query: 18 SSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQI 77
++ +ILHN I TMD+ V + RI A+G A++ A ++IDL+ +
Sbjct: 4 AADLILHNGRIYTMDEARPTAE--AVAIKDGRIVAVGSDAELKALAGP-ATEVIDLKGKF 60
Query: 78 LLPGFVNTHVH 88
+LPGFV+ H+H
Sbjct: 61 VLPGFVDAHLH 71
|
Length = 535 |
| >gnl|CDD|238628 cd01303, GDEase, Guanine deaminase (GDEase) | Back alignment and domain information |
|---|
Score = 57.3 bits (139), Expect = 3e-09
Identities = 54/241 (22%), Positives = 91/241 (37%), Gaps = 30/241 (12%)
Query: 28 IVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHV 87
+ ++ RV +G + VV I A G + + + A ++ID +Q +LPGF++TH+
Sbjct: 14 LELVEDALRVVEDGLIVVVDGNIIAAGAAETLKRAAKPGA-RVIDSPNQFILPGFIDTHI 72
Query: 88 HTSQQLAKGIADDVDLMTWLHDRIWPYESNMTEED-------SYISTLLCGIELIHSGVT 140
H Q G L+ WL +P E+ + ++ EL+ +G T
Sbjct: 73 HAPQYANIGSGLGEPLLDWLETYTFPEEAKFADPAYAREVYGRFLD------ELLRNGTT 126
Query: 141 C---FAEAGGQHVSEMAKAVELLGLRACLVQSTMD--CGEGL--PASWAVRTTDDCIQSQ 193
FA + + + G RA + MD E A + R T I+
Sbjct: 127 TACYFATIHPESTEALFEEAAKRGQRAIAGKVCMDRNAPEYYRDTAESSYRDTKRLIERW 186
Query: 194 KELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREF-KTGIHMHVAEIPYENQV 252
+ A R F + ++ LL +A+E I H++E E
Sbjct: 187 HGKSGRVKPAITPR----FAP----SCSEELLAALGKLAKEHPDLHIQTHISENLDEIAW 238
Query: 253 V 253
V
Sbjct: 239 V 239
|
Guanine deaminase is an aminohydrolase responsible for the conversion of guanine to xanthine and ammonia, the first step to utilize guanine as a nitrogen source. This reaction also removes the guanine base from the pool and therefore can play a role in the regulation of cellular GTP and the guanylate nucleotide pool. Length = 429 |
| >gnl|CDD|180428 PRK06151, PRK06151, N-ethylammeline chlorohydrolase; Provisional | Back alignment and domain information |
|---|
Score = 54.7 bits (132), Expect = 2e-08
Identities = 63/279 (22%), Positives = 100/279 (35%), Gaps = 53/279 (18%)
Query: 36 RVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAK 95
R+ R+G V DRI +G F D++ID + ++ PGF++ +
Sbjct: 19 RLLRDGEVVFEGDRILFVGHR------FDGEVDRVIDAGNALVGPGFIDLDALS------ 66
Query: 96 GIADDVD---LMTWLHD-----RIWP-------YESNMTEEDSYISTLLCGIELIHSGVT 140
D+D L R+W T E+ +L+ +G+T
Sbjct: 67 ----DLDTTILGLDNGPGWAKGRVWSRDYVEAGRREMYTPEELAFQKRYAFAQLLRNGIT 122
Query: 141 CFAEAG-------GQHVSEMAKAVEL---LGLRACLVQSTMDCGEGLPASWAVRTTDDCI 190
+ +E A A E LGLR L + G L A ++ D
Sbjct: 123 TAMPIASLFYRQWAETYAEFAAAAEAAGRLGLRVYLGPAYRSGGSVLEADGSLEVVFDEA 182
Query: 191 QSQKEL-----YAKHHHAA-DGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVA 244
+ L + K A +G +R +I T LL T ARE + +H A
Sbjct: 183 RGLAGLEEAIAFIKRVDGAHNGLVRGMLAPDRIETCTVDLLRRTAAAARELGCPVRLHCA 242
Query: 245 EIPYENQVVMDTRKVDHGT--VTFLDKIEFLQNNLLSAH 281
+ E ++T + HGT + +L + L LL H
Sbjct: 243 QGVLE----VETVRRLHGTTPLEWLADVGLLGPRLLIPH 277
|
Length = 488 |
| >gnl|CDD|236478 PRK09356, PRK09356, imidazolonepropionase; Validated | Back alignment and domain information |
|---|
Score = 54.4 bits (132), Expect = 2e-08
Identities = 17/75 (22%), Positives = 36/75 (48%), Gaps = 7/75 (9%)
Query: 18 SSTMILHNAVIVTMDKESR----VFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDL 73
+ ++ NA + TMD + +G + + +I +G AD+ + A ++ID
Sbjct: 2 MADLLWTNAQLATMDGGGMGELGIIEDGAIAIEDGKIVWVGPEADLP---AAYAAEVIDA 58
Query: 74 QSQILLPGFVNTHVH 88
+++ PG ++ H H
Sbjct: 59 GGKLVTPGLIDCHTH 73
|
Length = 406 |
| >gnl|CDD|236419 PRK09228, PRK09228, guanine deaminase; Provisional | Back alignment and domain information |
|---|
Score = 52.5 bits (127), Expect = 9e-08
Identities = 24/86 (27%), Positives = 41/86 (47%), Gaps = 12/86 (13%)
Query: 36 RVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQ---- 91
R +G + V RI A G A++ Q A ++ D + +++LPGF++TH+H Q
Sbjct: 27 RYIEDGLLLVEDGRIVAAGPYAELRAQLPADA-EVTDYRGKLILPGFIDTHIHYPQTDMI 85
Query: 92 -QLAKGIADDVDLMTWLHDRIWPYES 116
+ L+ WL+ +P E
Sbjct: 86 ASYGEQ------LLDWLNTYTFPEER 105
|
Length = 433 |
| >gnl|CDD|238434 cd00854, NagA, N-acetylglucosamine-6-phosphate deacetylase, NagA, catalyzes the hydrolysis of the N-acetyl group of N-acetyl-glucosamine-6-phosphate (GlcNAc-6-P) to glucosamine 6-phosphate and acetate | Back alignment and domain information |
|---|
Score = 49.1 bits (118), Expect = 1e-06
Identities = 35/134 (26%), Positives = 58/134 (43%), Gaps = 20/134 (14%)
Query: 21 MILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLP 80
+I+ NA I+T +G V V +I AIG ++ + AD+IIDL+ Q L+P
Sbjct: 1 LIIKNARILTPGGL----EDGAVLVEDGKIVAIGPEDEL-----EEADEIIDLKGQYLVP 51
Query: 81 GFVNTHVHTSQQLAKGIADDVDLMTWLHDRIWPYESNMTEE--DSYISTLL-CGIELIHS 137
GF++ H+H G D M + + + + S++ T + E I
Sbjct: 52 GFIDIHIH-------GGG-GADFMDGTAEALKTIAEALAKHGTTSFLPTTVTAPPEEIAK 103
Query: 138 GVTCFAEAGGQHVS 151
+ AEA +
Sbjct: 104 ALAAIAEAIAEGQG 117
|
This is the first committed step in the biosynthetic pathway to amino-sugar-nucleotides, which is needed for cell wall peptidoglycan and teichoic acid biosynthesis. Deacetylation of N-acetylglucosamine is also important in lipopolysaccharide synthesis and cell wall recycling. Length = 374 |
| >gnl|CDD|222250 pfam13594, Amidohydro_5, Amidohydrolase | Back alignment and domain information |
|---|
Score = 44.6 bits (106), Expect = 1e-06
Identities = 12/58 (20%), Positives = 26/58 (44%), Gaps = 5/58 (8%)
Query: 43 VFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIADD 100
+ + +I AIG ++ID + + +LPG ++ HVH ++ + +
Sbjct: 1 ILIEDGKIAAIGGDDLP-----DAEAEVIDAEGKYVLPGLIDMHVHLGEEPGRETLET 53
|
This family of enzymes are a part of a large metal dependent hydrolase superfamily. The family includes Adenine deaminase EC:3.5.4.2 that hydrolyses adenine to form hypoxanthine and ammonia. Adenine deaminases reaction is important for adenine utilisation as a purine and also as a nitrogen source. This family also includes dihydroorotase and N-acetylglucosamine-6-phosphate deacetylases, EC:3.5.1.25 These enzymes catalyze the reaction N-acetyl-D-glucosamine 6-phosphate + H2O <=> D-glucosamine 6-phosphate + acetate. This family includes the catalytic domain of urease alpha subunit. Dihydroorotases (EC:3.5.2.3) are also included. Length = 66 |
| >gnl|CDD|238625 cd01300, YtcJ_like, YtcJ_like metal dependent amidohydrolases | Back alignment and domain information |
|---|
Score = 46.5 bits (111), Expect = 8e-06
Identities = 17/47 (36%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Query: 42 GVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVH 88
V V RI A+G A+ A ++IDL+ + +LPGF+++H H
Sbjct: 1 AVAVRDGRIVAVGSDAEAKA-LKGPATEVIDLKGKTVLPGFIDSHSH 46
|
YtcJ is a Bacillus subtilis ORF of unknown function. The Arabidopsis homolog LAF3 has been identified as a factor required for photochrome A signalling. Length = 479 |
| >gnl|CDD|223122 COG0044, PyrC, Dihydroorotase and related cyclic amidohydrolases [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
Score = 44.6 bits (106), Expect = 3e-05
Identities = 17/69 (24%), Positives = 34/69 (49%), Gaps = 9/69 (13%)
Query: 20 TMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILL 79
+++ NA +V ++ + + +I AIG++ + +IID + ++L
Sbjct: 2 DLLIKNARVVDPGEDEV----ADILIKDGKIAAIGKNLEP-----TSGAEIIDAKGLLVL 52
Query: 80 PGFVNTHVH 88
PG V+ HVH
Sbjct: 53 PGLVDLHVH 61
|
Length = 430 |
| >gnl|CDD|181419 PRK08418, PRK08418, chlorohydrolase; Provisional | Back alignment and domain information |
|---|
Score = 44.6 bits (106), Expect = 3e-05
Identities = 18/61 (29%), Positives = 32/61 (52%), Gaps = 3/61 (4%)
Query: 28 IVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHV 87
I T D+ + +G V V D+I IG ++ +++ +I ++ +LLP F+N H
Sbjct: 9 IFTCDENFEILEDGAV-VFDDKILEIGDYENLKKKYPNA--KIQFFKNSVLLPAFINPHT 65
Query: 88 H 88
H
Sbjct: 66 H 66
|
Length = 408 |
| >gnl|CDD|224733 COG1820, NagA, N-acetylglucosamine-6-phosphate deacetylase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Score = 43.4 bits (103), Expect = 8e-05
Identities = 19/69 (27%), Positives = 31/69 (44%), Gaps = 9/69 (13%)
Query: 20 TMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILL 79
L N I T V G V + +I+A+ + +IIDL+ +L+
Sbjct: 1 MYALKNGRIFT---GHGVLDGGAVVIEDGKIEAVVPAELP------ADAEIIDLKGALLV 51
Query: 80 PGFVNTHVH 88
PGF++ H+H
Sbjct: 52 PGFIDLHIH 60
|
Length = 380 |
| >gnl|CDD|236479 PRK09357, pyrC, dihydroorotase; Validated | Back alignment and domain information |
|---|
Score = 42.9 bits (102), Expect = 1e-04
Identities = 13/46 (28%), Positives = 23/46 (50%), Gaps = 6/46 (13%)
Query: 43 VFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVH 88
V + +I AIG++ + ++ID ++ PG V+ HVH
Sbjct: 22 VLIDDGKIAAIGENIEAE------GAEVIDATGLVVAPGLVDLHVH 61
|
Length = 423 |
| >gnl|CDD|184033 PRK13404, PRK13404, dihydropyrimidinase; Provisional | Back alignment and domain information |
|---|
Score = 42.0 bits (99), Expect = 3e-04
Identities = 21/81 (25%), Positives = 36/81 (44%), Gaps = 13/81 (16%)
Query: 22 ILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPG 81
++ +VT + F+ + + RI A+G+ + ID +++LPG
Sbjct: 7 VIRGGTVVTA---TDTFQ-ADIGIRGGRIAALGEGLG-------PGAREIDATGRLVLPG 55
Query: 82 FVNTHVHTSQQLAKGI--ADD 100
V++H H Q GI ADD
Sbjct: 56 GVDSHCHIDQPSGDGIMMADD 76
|
Length = 477 |
| >gnl|CDD|224149 COG1228, HutI, Imidazolonepropionase and related amidohydrolases [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Score = 41.6 bits (98), Expect = 3e-04
Identities = 13/76 (17%), Positives = 34/76 (44%), Gaps = 8/76 (10%)
Query: 17 SSSTMILHNAVIVTMDKE----SRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIID 72
++ ++ + A++ T+ + +G V + +I A+G + ++ID
Sbjct: 1 TALDLLANIAMLATLAGRGLPGLGIIEDGAVLIEDGKIVAVGPEEIDIPA----GAEVID 56
Query: 73 LQSQILLPGFVNTHVH 88
+ + + PG ++ H H
Sbjct: 57 AKGKTVTPGLIDAHTH 72
|
Length = 406 |
| >gnl|CDD|237604 PRK14085, PRK14085, imidazolonepropionase; Provisional | Back alignment and domain information |
|---|
Score = 41.5 bits (98), Expect = 4e-04
Identities = 25/76 (32%), Positives = 39/76 (51%), Gaps = 10/76 (13%)
Query: 18 SSTMILHNAVIVTMDKE-----SRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIID 72
ST+I + +VT D E V R+ V V R+ +G +AD + AD+ +D
Sbjct: 1 MSTLITNIGELVTNDPELGEGPLGVLRDAAVVVEGGRVAWVGPAAD-----APAADERVD 55
Query: 73 LQSQILLPGFVNTHVH 88
+ +LPGFV++H H
Sbjct: 56 AGGRAVLPGFVDSHSH 71
|
Length = 382 |
| >gnl|CDD|181716 PRK09236, PRK09236, dihydroorotase; Reviewed | Back alignment and domain information |
|---|
Score = 41.4 bits (98), Expect = 4e-04
Identities = 23/71 (32%), Positives = 31/71 (43%), Gaps = 10/71 (14%)
Query: 18 SSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQI 77
+I NA IV E ++F G V + RI I S AD +ID +
Sbjct: 2 KRILI-KNARIVN---EGKIFE-GDVLIENGRIAKIASSISAKS-----ADTVIDAAGRY 51
Query: 78 LLPGFVNTHVH 88
LLPG ++ VH
Sbjct: 52 LLPGMIDDQVH 62
|
Length = 444 |
| >gnl|CDD|237967 PRK15446, PRK15446, phosphonate metabolism protein PhnM; Provisional | Back alignment and domain information |
|---|
Score = 40.9 bits (97), Expect = 5e-04
Identities = 22/69 (31%), Positives = 29/69 (42%), Gaps = 11/69 (15%)
Query: 18 SSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQI 77
MIL NA +V V +G + + RI AI A S + ID +
Sbjct: 1 MMEMILSNARLVL---PDEVV-DGSLLIEDGRIAAIDPGA------SALP-GAIDAEGDY 49
Query: 78 LLPGFVNTH 86
LLPG V+ H
Sbjct: 50 LLPGLVDLH 58
|
Length = 383 |
| >gnl|CDD|182623 PRK10657, PRK10657, isoaspartyl dipeptidase; Provisional | Back alignment and domain information |
|---|
Score = 40.6 bits (96), Expect = 7e-04
Identities = 14/46 (30%), Positives = 26/46 (56%), Gaps = 2/46 (4%)
Query: 43 VFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVH 88
+ + +I AI + +I + ++ID +IL+PGF++ HVH
Sbjct: 21 ILIAGGKIIAIADNINIPDIVPDI--EVIDASGKILVPGFIDQHVH 64
|
Length = 388 |
| >gnl|CDD|238621 cd01296, Imidazolone-5PH, Imidazolonepropionase/imidazolone-5-propionate hydrolase (Imidazolone-5PH) catalyzes the third step in the histidine degradation pathway, the hydrolysis of (S)-3-(5-oxo-4,5-dihydro-3H-imidazol-4-yl)propanoate to N-formimidoyl-L-glutamate | Back alignment and domain information |
|---|
Score = 40.3 bits (95), Expect = 7e-04
Identities = 14/46 (30%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
Query: 43 VFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVH 88
+ + RI A+G +A L A + ID + + PG V+ H H
Sbjct: 1 IAIRDGRIAAVGPAAS-LPAPGPAAAEEIDAGGRAVTPGLVDCHTH 45
|
In bacteria, the enzyme is part of histidine utilization (hut) operon. Length = 371 |
| >gnl|CDD|180337 PRK05985, PRK05985, cytosine deaminase; Provisional | Back alignment and domain information |
|---|
Score = 40.3 bits (95), Expect = 7e-04
Identities = 17/61 (27%), Positives = 27/61 (44%), Gaps = 13/61 (21%)
Query: 36 RVFRN----GG----VFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHV 87
+FRN GG + + RI AIG + + ++ D + LPG V+ H+
Sbjct: 4 LLFRNVRPAGGAAVDILIRDGRIAAIGPALA-----APPGAEVEDGGGALALPGLVDGHI 58
Query: 88 H 88
H
Sbjct: 59 H 59
|
Length = 391 |
| >gnl|CDD|163175 TIGR03178, allantoinase, allantoinase | Back alignment and domain information |
|---|
Score = 40.1 bits (94), Expect = 0.001
Identities = 22/71 (30%), Positives = 34/71 (47%), Gaps = 10/71 (14%)
Query: 21 MILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLP 80
+I+ ++ + E V V +I AIG DIL A +IID ++ P
Sbjct: 2 LIIRGGRVILPNGEREA----DVGVKGGKIAAIGP--DILGP----AAKIIDAGGLVVFP 51
Query: 81 GFVNTHVHTSQ 91
G V+THVH ++
Sbjct: 52 GVVDTHVHINE 62
|
This enzyme carries out the first step in the degradation of allantoin, a ring-opening hydrolysis. The seed members of this model are all in the vicinity of other genes involved in the processes of xanthine/urate/allantoin catabolism. Although not included in the seed, many eukaryotic homologs of this family are included above the trusted cutoff. Below the noise cutoff are related hydantoinases. Length = 443 |
| >gnl|CDD|238640 cd01315, L-HYD_ALN, L-Hydantoinases (L-HYDs) and Allantoinase (ALN); L-Hydantoinases are a member of the dihydropyrimidinase family, which catalyzes the reversible hydrolytic ring opening of dihydropyrimidines and hydantoins (five-membered cyclic diamides used in biotechnology) | Back alignment and domain information |
|---|
Score = 38.8 bits (91), Expect = 0.003
Identities = 19/68 (27%), Positives = 34/68 (50%), Gaps = 9/68 (13%)
Query: 21 MILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLP 80
+++ N +VT D R + V +I AIG + A+++ID +++P
Sbjct: 2 LVIKNGRVVTPDGV----READIAVKGGKIAAIGPDIANTE-----AEEVIDAGGLVVMP 52
Query: 81 GFVNTHVH 88
G ++THVH
Sbjct: 53 GLIDTHVH 60
|
But L-HYDs differ by having an L-enantio specificity and by lacking activity on possible natural substrates such as dihydropyrimidines. Allantoinase catalyzes the hydrolytic cleavage of the five-member ring of allantoin (5-ureidohydantoin) to form allantoic acid. Length = 447 |
| >gnl|CDD|238639 cd01314, D-HYD, D-hydantoinases (D-HYD) also called dihydropyrimidases (DHPase) and related proteins; DHPases are a family of enzymes that catalyze the reversible hydrolytic ring opening of the amide bond in five- or six-membered cyclic diamides, like dihydropyrimidine or hydantoin | Back alignment and domain information |
|---|
Score = 38.7 bits (91), Expect = 0.003
Identities = 20/81 (24%), Positives = 36/81 (44%), Gaps = 10/81 (12%)
Query: 21 MILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLP 80
+I+ N IVT D + + + +I AIG + + + ++ID + +LP
Sbjct: 1 LIIKNGTIVTADGSFK----ADILIEDGKIVAIGPNLE-----APGGVEVIDATGKYVLP 51
Query: 81 GFVNTHVHTSQQLAKGI-ADD 100
G ++ H H + ADD
Sbjct: 52 GGIDPHTHLELPFMGTVTADD 72
|
The hydrolysis of dihydropyrimidines is the second step of reductive catabolism of pyrimidines in human. The hydrolysis of 5-substituted hydantoins in microorganisms leads to enantiomerically pure N-carbamyl amino acids, which are used for the production of antibiotics, peptide hormones, pyrethroids, and pesticides. HYDs are classified depending on their stereoselectivity. This family also includes collapsin response regulators (CRMPs), cytosolic proteins involved in neuronal differentiation and axonal guidance which have strong homology to DHPases, but lack most of the active site residues. Length = 447 |
| >gnl|CDD|238633 cd01308, Isoaspartyl-dipeptidase, Isoaspartyl dipeptidase hydrolyzes the beta-L-isoaspartyl linkages in dipeptides, as part of the degradative pathway to eliminate proteins with beta-L-isoaspartyl peptide bonds, bonds whereby the beta-group of an aspartate forms the peptide link with the amino group of the following amino acid | Back alignment and domain information |
|---|
Score = 38.1 bits (89), Expect = 0.004
Identities = 15/46 (32%), Positives = 24/46 (52%), Gaps = 3/46 (6%)
Query: 43 VFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVH 88
+ + +I AI D L ++DL +IL+PGF++ HVH
Sbjct: 20 ILIAGGKILAI---EDQLNLPGYENVTVVDLHGKILVPGFIDQHVH 62
|
Formation of this bond is a spontaneous nonenzymatic reaction in nature and can profoundly effect the function of the protein. Isoaspartyl dipeptidase is an octameric enzyme that contains a binuclear zinc center in the active site of each subunit and shows a strong preference of hydrolyzing Asp-Leu dipeptides. Length = 387 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 304 | |||
| PRK15493 | 435 | 5-methylthioadenosine/S-adenosylhomocysteine deami | 100.0 | |
| TIGR03314 | 441 | Se_ssnA putative selenium metabolism protein SsnA. | 100.0 | |
| PRK06687 | 419 | chlorohydrolase; Validated | 100.0 | |
| PRK07203 | 442 | putative chlorohydrolase/aminohydrolase; Validated | 100.0 | |
| PRK09045 | 443 | N-ethylammeline chlorohydrolase; Provisional | 100.0 | |
| PRK12393 | 457 | amidohydrolase; Provisional | 100.0 | |
| cd01303 | 429 | GDEase Guanine deaminase (GDEase). Guanine deamina | 100.0 | |
| PRK09228 | 433 | guanine deaminase; Provisional | 100.0 | |
| PRK08203 | 451 | hydroxydechloroatrazine ethylaminohydrolase; Revie | 100.0 | |
| PRK07228 | 445 | N-ethylammeline chlorohydrolase; Provisional | 100.0 | |
| PRK06380 | 418 | metal-dependent hydrolase; Provisional | 100.0 | |
| PRK06038 | 430 | N-ethylammeline chlorohydrolase; Provisional | 100.0 | |
| PRK08418 | 408 | chlorohydrolase; Provisional | 100.0 | |
| COG0402 | 421 | SsnA Cytosine deaminase and related metal-dependen | 100.0 | |
| PRK08393 | 424 | N-ethylammeline chlorohydrolase; Provisional | 100.0 | |
| TIGR02967 | 401 | guan_deamin guanine deaminase. This model describe | 100.0 | |
| cd01313 | 418 | Met_dep_hydrolase_E Metallo-dependent hydrolases, | 100.0 | |
| cd01312 | 381 | Met_dep_hydrolase_D Metallo-dependent hydrolases, | 100.0 | |
| PRK06151 | 488 | N-ethylammeline chlorohydrolase; Provisional | 100.0 | |
| TIGR02022 | 455 | hutF formiminoglutamate deiminase. In some species | 100.0 | |
| PRK09229 | 456 | N-formimino-L-glutamate deiminase; Validated | 100.0 | |
| PRK08204 | 449 | hypothetical protein; Provisional | 100.0 | |
| cd01298 | 411 | ATZ_TRZ_like TRZ/ATZ family contains enzymes from | 100.0 | |
| KOG3968 | 439 | consensus Atrazine chlorohydrolase/guanine deamina | 100.0 | |
| PRK07213 | 375 | chlorohydrolase; Provisional | 100.0 | |
| PRK09230 | 426 | cytosine deaminase; Provisional | 99.97 | |
| cd01293 | 398 | Bact_CD Bacterial cytosine deaminase and related m | 99.96 | |
| PRK07572 | 426 | cytosine deaminase; Validated | 99.95 | |
| PRK09356 | 406 | imidazolonepropionase; Validated | 99.95 | |
| PRK14085 | 382 | imidazolonepropionase; Provisional | 99.94 | |
| TIGR01224 | 377 | hutI imidazolonepropionase. This enzyme catalyzes | 99.93 | |
| cd01305 | 263 | archeal_chlorohydrolases Predicted chlorohydrolase | 99.91 | |
| cd01296 | 371 | Imidazolone-5PH Imidazolonepropionase/imidazolone- | 99.9 | |
| PRK05985 | 391 | cytosine deaminase; Provisional | 99.89 | |
| cd01314 | 447 | D-HYD D-hydantoinases (D-HYD) also called dihydrop | 99.89 | |
| PRK06846 | 410 | putative deaminase; Validated | 99.88 | |
| PLN02942 | 486 | dihydropyrimidinase | 99.88 | |
| PRK12394 | 379 | putative metallo-dependent hydrolase; Provisional | 99.88 | |
| TIGR02033 | 454 | D-hydantoinase D-hydantoinase. This model represen | 99.87 | |
| TIGR01792 | 567 | urease_alph urease, alpha subunit. This model desc | 99.86 | |
| PRK07583 | 438 | cytosine deaminase-like protein; Validated | 99.86 | |
| PRK08323 | 459 | phenylhydantoinase; Validated | 99.84 | |
| PRK10657 | 388 | isoaspartyl dipeptidase; Provisional | 99.84 | |
| PLN02303 | 837 | urease | 99.82 | |
| TIGR01975 | 389 | isoAsp_dipep isoaspartyl dipeptidase IadA. The L-i | 99.79 | |
| COG3964 | 386 | Predicted amidohydrolase [General function predict | 99.78 | |
| PRK09357 | 423 | pyrC dihydroorotase; Validated | 99.77 | |
| cd01297 | 415 | D-aminoacylase D-aminoacylases (N-acyl-D-Amino aci | 99.75 | |
| PRK13309 | 572 | ureC urease subunit alpha; Reviewed | 99.74 | |
| PLN02795 | 505 | allantoinase | 99.74 | |
| cd01299 | 342 | Met_dep_hydrolase_A Metallo-dependent hydrolases, | 99.73 | |
| KOG2584 | 522 | consensus Dihydroorotase and related enzymes [Nucl | 99.73 | |
| TIGR03178 | 443 | allantoinase allantoinase. This enzyme carries out | 99.72 | |
| PRK09237 | 380 | dihydroorotase; Provisional | 99.72 | |
| PRK09061 | 509 | D-glutamate deacylase; Validated | 99.71 | |
| PRK15446 | 383 | phosphonate metabolism protein PhnM; Provisional | 99.71 | |
| cd01308 | 387 | Isoaspartyl-dipeptidase Isoaspartyl dipeptidase hy | 99.71 | |
| cd01315 | 447 | L-HYD_ALN L-Hydantoinases (L-HYDs) and Allantoinas | 99.7 | |
| cd00854 | 374 | NagA N-acetylglucosamine-6-phosphate deacetylase, | 99.7 | |
| COG1228 | 406 | HutI Imidazolonepropionase and related amidohydrol | 99.69 | |
| TIGR00221 | 380 | nagA N-acetylglucosamine-6-phosphate deacetylase. | 99.68 | |
| PRK13404 | 477 | dihydropyrimidinase; Provisional | 99.68 | |
| PRK13985 | 568 | ureB urease subunit beta; Provisional | 99.68 | |
| PRK13308 | 569 | ureC urease subunit alpha; Reviewed | 99.67 | |
| cd00375 | 567 | Urease_alpha Urease alpha-subunit; Urease is a nic | 99.67 | |
| PRK13206 | 573 | ureC urease subunit alpha; Reviewed | 99.67 | |
| PRK13207 | 568 | ureC urease subunit alpha; Reviewed | 99.67 | |
| PRK06886 | 329 | hypothetical protein; Validated | 99.66 | |
| PRK11170 | 382 | nagA N-acetylglucosamine-6-phosphate deacetylase; | 99.64 | |
| PRK07575 | 438 | dihydroorotase; Provisional | 99.64 | |
| cd01307 | 338 | Met_dep_hydrolase_B Metallo-dependent hydrolases, | 99.64 | |
| COG1574 | 535 | Predicted metal-dependent hydrolase with the TIM-b | 99.64 | |
| COG1820 | 380 | NagA N-acetylglucosamine-6-phosphate deacetylase [ | 99.61 | |
| PRK07627 | 425 | dihydroorotase; Provisional | 99.61 | |
| PRK09236 | 444 | dihydroorotase; Reviewed | 99.59 | |
| TIGR02318 | 376 | phosphono_phnM phosphonate metabolism protein PhnM | 99.59 | |
| cd01300 | 479 | YtcJ_like YtcJ_like metal dependent amidohydrolase | 99.59 | |
| PRK02382 | 443 | dihydroorotase; Provisional | 99.58 | |
| PRK07369 | 418 | dihydroorotase; Provisional | 99.58 | |
| PF01979 | 333 | Amidohydro_1: Amidohydrolase family; InterPro: IPR | 99.58 | |
| PRK06189 | 451 | allantoinase; Provisional | 99.57 | |
| PF13594 | 68 | Amidohydro_5: Amidohydrolase; PDB: 4F0R_A 4F0S_A 1 | 99.57 | |
| PRK09059 | 429 | dihydroorotase; Validated | 99.57 | |
| TIGR01178 | 552 | ade adenine deaminase. The family described by thi | 99.56 | |
| COG0044 | 430 | PyrC Dihydroorotase and related cyclic amidohydrol | 99.55 | |
| TIGR03583 | 365 | EF_0837 probable amidohydrolase EF_0837/AHA_3915. | 99.53 | |
| cd01292 | 275 | metallo-dependent_hydrolases Superfamily of metall | 99.51 | |
| PRK09358 | 340 | adenosine deaminase; Provisional | 99.5 | |
| PRK09060 | 444 | dihydroorotase; Validated | 99.49 | |
| COG1001 | 584 | AdeC Adenine deaminase [Nucleotide transport and m | 99.48 | |
| cd01320 | 325 | ADA Adenosine deaminase (ADA) is a monomeric zinc | 99.46 | |
| TIGR03121 | 556 | one_C_dehyd_A formylmethanofuran dehydrogenase sub | 99.45 | |
| PRK08044 | 449 | allantoinase; Provisional | 99.44 | |
| PRK10027 | 588 | cryptic adenine deaminase; Provisional | 99.43 | |
| PRK08417 | 386 | dihydroorotase; Provisional | 99.42 | |
| cd01304 | 541 | FMDH_A Formylmethanofuran dehydrogenase (FMDH) sub | 99.41 | |
| TIGR00857 | 411 | pyrC_multi dihydroorotase, multifunctional complex | 99.39 | |
| TIGR01430 | 324 | aden_deam adenosine deaminase. This family include | 99.39 | |
| COG0804 | 568 | UreC Urea amidohydrolase (urease) alpha subunit [A | 99.37 | |
| cd01309 | 359 | Met_dep_hydrolase_C Metallo-dependent hydrolases, | 99.32 | |
| COG3454 | 377 | Metal-dependent hydrolase involved in phosphonate | 99.22 | |
| COG1229 | 575 | FwdA Formylmethanofuran dehydrogenase subunit A [E | 99.2 | |
| COG3653 | 579 | N-acyl-D-aspartate/D-glutamate deacylase [Secondar | 99.18 | |
| cd01317 | 374 | DHOase_IIa Dihydroorotase (DHOase), subgroup IIa; | 99.18 | |
| PRK01211 | 409 | dihydroorotase; Provisional | 99.1 | |
| PRK04250 | 398 | dihydroorotase; Provisional | 99.1 | |
| KOG3892 | 407 | consensus N-acetyl-glucosamine-6-phosphate deacety | 99.05 | |
| PRK00369 | 392 | pyrC dihydroorotase; Provisional | 98.75 | |
| cd01295 | 422 | AdeC Adenine deaminase (AdeC) directly deaminates | 98.73 | |
| cd00530 | 293 | PTE Phosphotriesterase (PTE) catalyzes the hydroly | 98.45 | |
| cd01302 | 337 | Cyclic_amidohydrolases Cyclic amidohydrolases, inc | 98.35 | |
| cd00443 | 305 | ADA_AMPD Adenosine/AMP deaminase. Adenosine deamin | 98.14 | |
| PRK09875 | 292 | putative hydrolase; Provisional | 98.12 | |
| cd01318 | 361 | DHOase_IIb Dihydroorotase (DHOase), subgroup IIb; | 98.01 | |
| PF13147 | 304 | Amidohydro_4: Amidohydrolase; PDB: 3SFW_B 2FTW_A 2 | 97.84 | |
| PF02126 | 308 | PTE: Phosphotriesterase family; InterPro: IPR00155 | 97.75 | |
| PTZ00124 | 362 | adenosine deaminase; Provisional | 97.71 | |
| cd01321 | 345 | ADGF Adenosine deaminase-related growth factors (A | 97.62 | |
| cd01306 | 325 | PhnM PhnM is believed to be a subunit of the membr | 97.6 | |
| PF07969 | 404 | Amidohydro_3: Amidohydrolase family; InterPro: IPR | 97.57 | |
| TIGR00010 | 252 | hydrolase, TatD family. Several genomes have multi | 97.52 | |
| cd01294 | 335 | DHOase Dihydroorotase (DHOase) catalyzes the rever | 97.51 | |
| COG1099 | 254 | Predicted metal-dependent hydrolases with the TIM- | 97.41 | |
| COG1735 | 316 | Php Predicted metal-dependent hydrolase with the T | 97.34 | |
| cd01310 | 251 | TatD_DNAse TatD like proteins; E.coli TatD is a cy | 97.17 | |
| cd01316 | 344 | CAD_DHOase The eukaryotic CAD protein is a trifunc | 97.04 | |
| PF00449 | 121 | Urease_alpha: Urease alpha-subunit, N-terminal dom | 96.96 | |
| PRK11449 | 258 | putative deoxyribonuclease YjjV; Provisional | 96.84 | |
| COG0084 | 256 | TatD Mg-dependent DNase [DNA replication, recombin | 96.77 | |
| PRK10812 | 265 | putative DNAse; Provisional | 96.66 | |
| PRK10425 | 258 | DNase TatD; Provisional | 96.61 | |
| PF01026 | 255 | TatD_DNase: TatD related DNase The Pfam entry find | 96.44 | |
| COG1816 | 345 | Add Adenosine deaminase [Nucleotide transport and | 96.42 | |
| PF00962 | 331 | A_deaminase: Adenosine/AMP deaminase immunodeficie | 95.91 | |
| cd01311 | 263 | PDC_hydrolase 2-pyrone-4,6-dicarboxylic acid (PDC) | 95.04 | |
| KOG1097 | 399 | consensus Adenine deaminase/adenosine deaminase [N | 94.89 | |
| PF12890 | 142 | DHOase: Dihydro-orotase-like; InterPro: IPR024403 | 93.66 | |
| TIGR01431 | 479 | adm_rel adenosine deaminase-related growth factor. | 93.23 | |
| COG5016 | 472 | Pyruvate/oxaloacetate carboxyltransferase [Energy | 85.81 | |
| TIGR00856 | 341 | pyrC_dimer dihydroorotase, homodimeric type. This | 84.64 |
| >PRK15493 5-methylthioadenosine/S-adenosylhomocysteine deaminase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.9e-45 Score=332.30 Aligned_cols=270 Identities=27% Similarity=0.392 Sum_probs=234.8
Q ss_pred cEEEEccEEEecCCCCceeeeeeEEEeCCEEEEecCChhhhhhhcCCCceEEeCCCCEeeccccccCccchhhhhhcccC
Q 022028 20 TMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIAD 99 (304)
Q Consensus 20 ~~li~~~~ii~~~~~~~~~~~~~I~I~~g~I~~i~~~~~~~~~~~~~~~~vID~~g~iv~PG~ID~H~Hl~~s~~~g~~~ 99 (304)
.++|+|++|+++++...++++++|+|+||+|++|++..... . ..+.++||++|++|+|||||+|+|+.++.+||..+
T Consensus 2 ~~li~~~~v~t~~~~~~~~~~g~V~i~~g~I~~vg~~~~~~-~--~~~~~viD~~g~~i~PGlVn~H~H~~~~~~rg~~~ 78 (435)
T PRK15493 2 KTTYVNATIVTMNEQNEVIENGYIIVENDQIIDVNSGEFAS-D--FEVDEVIDMKGKWVLPGLVNTHTHVVMSLLRGIGD 78 (435)
T ss_pred eEEEEccEEEEeCCCCcEecCcEEEEECCEEEEEcCccccc-c--CCCCeEEeCCCCEEccceeecccCccchhhhccCC
Confidence 37899999999887667889999999999999999853211 1 12568999999999999999999999999999988
Q ss_pred CCCccccccccccCccCCCChHHHHHHHHHHHHHHHhcCcceeecCCC---CCHHHHHHHHHHcCCeEEeecccccCCCC
Q 022028 100 DVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGG---QHVSEMAKAVELLGLRACLVQSTMDCGEG 176 (304)
Q Consensus 100 ~~~~~~~l~~~~~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~d~~~---~~~~~~~~~~~~~gir~~~~~~~~d~g~~ 176 (304)
+.++.+|+...+|+.+..+++++.|..++.++.++|++||||++|++. ...+...+++.+.|+|.++++.+++.+.
T Consensus 79 ~~~l~~wl~~~~~~~~~~~~~e~~~~~a~~~~~e~l~~G~Ttv~d~~~~~~~~~~~~~~a~~~~GiR~~~~~~~~~~~~- 157 (435)
T PRK15493 79 DMLLQPWLETRIWPLESQFTPELAVASTELGLLEMVKSGTTSFSDMFNPIGVDQDAIMETVSRSGMRAAVSRTLFSFGT- 157 (435)
T ss_pred CCCHHHHHHhchhhchhcCCHHHHHHHHHHHHHHHHhCCccEEEccccccccCHHHHHHHHHHcCCcEEEeeeecCCCC-
Confidence 889999999888999888999999999999999999999999999763 2346778899999999999987776432
Q ss_pred CCCCcccCChHHHHHHHHHHHHHHcCCCCCCeEEEEeeCcccCCCHHHHHHHHHHHHHhCCeeeEEecCChhhHHHHHHh
Q 022028 177 LPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDT 256 (304)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~e~l~~~~~~a~~~~~~~~~H~~E~~~~~~~~~~~ 256 (304)
+ ......++..++++++|... .+++++.++|++++++++++++++.++|+++|+++++|++|+..+.+.+++.
T Consensus 158 -~-----~~~~~~~~~~~~~~~~~~~~-~~~i~~~~~~~~~~t~s~e~l~~~~~~A~~~g~~v~~H~~e~~~e~~~~~~~ 230 (435)
T PRK15493 158 -K-----EDEKKAIEEAEKYVKRYYNE-SGMLTTMVAPHSPYTCSTELLEECARIAVENQTMVHIHLSETEREVRDIEAQ 230 (435)
T ss_pred -C-----ccHHHHHHHHHHHHHHhcCC-CCCeEEEEeCCCCCcCCHHHHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHH
Confidence 1 12345667777888887643 4689999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCHHHHHHHhCCCCCCeeEEEeccCCcchhc-----------ccccccccccc
Q 022028 257 RKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEVN-----------CTFGNFKYAVH 302 (304)
Q Consensus 257 ~g~~~~~~~~l~~~g~l~~~~~~~H~~~l~~~di~-----------~p~sN~~l~~~ 302 (304)
+|.+ +++++++.|+|+++++++||++++++|++ ||.||++|++.
T Consensus 231 ~g~~--~~~~l~~~Gll~~~~~~~H~~~l~~~d~~~la~~g~~v~~~P~sn~~l~~g 285 (435)
T PRK15493 231 YGKR--PVEYAASCGLFKRPTVIAHGVVLNDNERAFLAEHDVRVAHNPNSNLKLGSG 285 (435)
T ss_pred hCCC--HHHHHHHcCCCCCCcEEEEeecCCHHHHHHHHHcCCeEEEChHHHHHHhcC
Confidence 9975 99999999999999999999999999997 99999988764
|
|
| >TIGR03314 Se_ssnA putative selenium metabolism protein SsnA | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-44 Score=331.41 Aligned_cols=271 Identities=25% Similarity=0.429 Sum_probs=231.9
Q ss_pred EEEEccEEEecCCCCceeeeeeEEEeCCEEEEecCChhhhhhhcCCCceEEeCCCCEeeccccccCccchhhhhhcccCC
Q 022028 21 MILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIADD 100 (304)
Q Consensus 21 ~li~~~~ii~~~~~~~~~~~~~I~I~~g~I~~i~~~~~~~~~~~~~~~~vID~~g~iv~PG~ID~H~Hl~~s~~~g~~~~ 100 (304)
++|+|++|+++++...++++++|.|+||+|++|++..+....++ +.++||++|++|+|||||+|+|+.++.+||...+
T Consensus 1 ~li~~~~i~t~~~~~~~~~~~~v~i~~g~I~~vg~~~~~~~~~~--~~~~id~~g~~v~PG~vd~H~H~~~~~~rg~~~d 78 (441)
T TIGR03314 1 LLIGNGTAVQLDPTRPIQEGGDIAIDGDVIKAVGPTEELKQKYP--EATFIDAKGKLIMPGFINTHNHFYSTFARGMMAD 78 (441)
T ss_pred CEEECCEEEecCCCCceEeccEEEEECCEEEEEcCchhhcccCC--CCeEEeCCCCEEecCeeecccchhhhhhcccccc
Confidence 36899999987765557889999999999999998643321122 4589999999999999999999999999987644
Q ss_pred ----CCccccccccccCccCCCChHHHHHHHHHHHHHHHhcCcceeecCCCC------CHHHHHHHHHHcCCeEEeeccc
Q 022028 101 ----VDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQ------HVSEMAKAVELLGLRACLVQST 170 (304)
Q Consensus 101 ----~~~~~~l~~~~~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~d~~~~------~~~~~~~~~~~~gir~~~~~~~ 170 (304)
.++.+|+...+|+.+..++++++|.+++.++.+++++||||++|+... ..+.+.+++.+.|+|.+++..+
T Consensus 79 ~~~~~~~~~~l~~~~~~~~~~~~~e~~~~~a~~~~~e~l~~GtTt~~d~~~~~~~~~~~~~~~~~a~~~~GiR~~~~~~~ 158 (441)
T TIGR03314 79 IPPPPDFISILKNLWWRLDRALTLEDVYYSGLICSLDAIKSGCTTVIDHHASPNAITGSLSTIRKAADEAGLRTMLCYET 158 (441)
T ss_pred CCCCCCHHHHHHHHHHHhhhhCCHHHHHHHHHHHHHHHHHcCCeEEEecccccccccchHHHHHHHHHHhCCeEEEeeee
Confidence 368899988888988889999999999999999999999999998521 1456789999999999998877
Q ss_pred ccCCCCCCCCcccCChHHHHHHHHHHHHHHcCCCCCCeEEEEeeCcccCCCHHHHHHHHHHHHHhCCeeeEEecCChhhH
Q 022028 171 MDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYEN 250 (304)
Q Consensus 171 ~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~e~l~~~~~~a~~~~~~~~~H~~E~~~~~ 250 (304)
++.... ....+.++...++++++....++++++.++|+++++++++.++.+.++|+++++++++|++|+..+.
T Consensus 159 ~~~~~~-------~~~~~~l~~~~~~~~~~~~~~~~~i~~~~~p~~~~t~s~~~l~~~~~lA~~~~~~i~~H~~E~~~e~ 231 (441)
T TIGR03314 159 SDRDGG-------KEMQEGVEENIAFIKKSSGKEPYLVEAHIGAHAPFTVSDAGLEMCREAVQATGRGFHIHVAEDIYDV 231 (441)
T ss_pred ecCCCc-------ccHHHHHHHHHHHHHHhccCCCCceEEEEecCCCCCCCHHHHHHHHHHHHHcCCCEEEEcCCCHHHH
Confidence 763211 1234556667778888876556789999999999999999999999999999999999999999999
Q ss_pred HHHHHhcCCCCCHHHHHHHhCCCCCCeeEEEeccCCcchhc-----------ccccccccccc
Q 022028 251 QVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEVN-----------CTFGNFKYAVH 302 (304)
Q Consensus 251 ~~~~~~~g~~~~~~~~l~~~g~l~~~~~~~H~~~l~~~di~-----------~p~sN~~l~~~ 302 (304)
+.+++++|++ ++++|++.|+|+++++++||++++++|++ ||.||++|++.
T Consensus 232 ~~~~~~~g~~--~~~~l~~~G~l~~~~~~~H~~~~~~~d~~~la~~g~~v~~cP~sn~~l~~G 292 (441)
T TIGR03314 232 EDSHHKYGKD--IVERLADFGLLGSKTLAAHCIYLSDREIELLNETDTFVVHNPESNMGNAVG 292 (441)
T ss_pred HHHHHHcCCC--HHHHHHHCCCCCCCeEEEEEecCCHHHHHHHHHcCCcEEECHHHHhhhccC
Confidence 9999999985 99999999999999999999999999998 99999999864
|
Members of this protein family are found exclusively in genomes that contain putative set of labile selenium-dependent enzyme accessory proteins as well as homologs of a labile selenium-dependent purine hydroxylase. A mutant in this gene in Escherichia coli had improved stationary phase viability. The function is unknown. |
| >PRK06687 chlorohydrolase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-43 Score=322.47 Aligned_cols=269 Identities=25% Similarity=0.420 Sum_probs=234.1
Q ss_pred EEEEccEEEecCCCCceeeeeeEEEeCCEEEEecCChhhhhhhcCCCceEEeCCCCEeeccccccCccchhhhhhcccCC
Q 022028 21 MILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIADD 100 (304)
Q Consensus 21 ~li~~~~ii~~~~~~~~~~~~~I~I~~g~I~~i~~~~~~~~~~~~~~~~vID~~g~iv~PG~ID~H~Hl~~s~~~g~~~~ 100 (304)
++|+|++|+++++..+++++++|+|+||+|++|++..+.. ...+.++||+.|++|+|||||+|+|+.++.+||...+
T Consensus 2 ~~~~n~~vvt~d~~~~~~~~g~VlV~~g~I~aVg~~~~~~---~~~~~~viD~~g~~v~PGlIn~H~H~~~~~~rg~~~~ 78 (419)
T PRK06687 2 KVFQHVNIVTCDQDFHVYLDGILAVKDSQIVYVGQDKPAF---LEQAEQIIDYQGAWIMPGLVNCHTHSAMTGLRGIRDD 78 (419)
T ss_pred cceEeeEEEEeCCCceEecCcEEEEECCEEEEecCccccc---ccccCeEEeCCCCEEccceeeeccCCCccccccccCC
Confidence 5799999999987777889999999999999999864321 1124689999999999999999999999999998877
Q ss_pred CCccccccccccCccCCCChHHHHHHHHHHHHHHHhcCcceeecCCC---CCHHHHHHHHHHcCCeEEeecccccCCCCC
Q 022028 101 VDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGG---QHVSEMAKAVELLGLRACLVQSTMDCGEGL 177 (304)
Q Consensus 101 ~~~~~~l~~~~~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~d~~~---~~~~~~~~~~~~~gir~~~~~~~~d~g~~~ 177 (304)
.++.+|+...+|+.+..+++++.+..++.++.+++++||||++|+.. ...+...+++.+.|+|.++++.+++.+.
T Consensus 79 ~~~~~wl~~~~~~~~~~~~~~~~~~~~~~a~~e~l~~GvTTv~d~~~~~~~~~~~~~~a~~~~Gir~~~~~~~~~~~~-- 156 (419)
T PRK06687 79 SNLHEWLNDYIWPAESEFTPDMTTNAVKEALTEMLQSGTTTFNDMYNPNGVDIQQIYQVVKTSKMRCYFSPTLFSSET-- 156 (419)
T ss_pred CCHHHHHHhhhccccccCCHHHHHHHHHHHHHHHHhcCcceeehhhccccccHHHHHHHHHHhCCceEeccccccCCc--
Confidence 88999999988988888999999999999999999999999999753 2356778899999999988776654221
Q ss_pred CCCcccCChHHHHHHHHHHHHHHcCCCCCCeEEEEeeCcccCCCHHHHHHHHHHHHHhCCeeeEEecCChhhHHHHHHhc
Q 022028 178 PASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTR 257 (304)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~e~l~~~~~~a~~~~~~~~~H~~E~~~~~~~~~~~~ 257 (304)
....+.++..+++++++.....++++++++|++++++++++++++.++|+++|+++++|+.|+..+.+.+.+.+
T Consensus 157 ------~~~~~~~~~~~~~i~~~~~~~~~~i~~~~~~~~~~~~s~e~l~~~~~~A~~~g~~i~~H~~e~~~e~~~~~~~~ 230 (419)
T PRK06687 157 ------ETTAETISRTRSIIDEILKYKNPNFKVMVAPHSPYSCSRDLLEASLEMAKELNIPLHVHVAETKEESGIILKRY 230 (419)
T ss_pred ------ccHHHHHHHHHHHHHHHhccCCCceEEEEeCCCCCCCCHHHHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHH
Confidence 12456677788888888765567799999999999999999999999999999999999999999999999999
Q ss_pred CCCCCHHHHHHHhCCCCCCeeEEEeccCCcchhc-----------ccccccccccc
Q 022028 258 KVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEVN-----------CTFGNFKYAVH 302 (304)
Q Consensus 258 g~~~~~~~~l~~~g~l~~~~~~~H~~~l~~~di~-----------~p~sN~~l~~~ 302 (304)
|.+ +++++++.|+|+++++++||++++++|++ ||.||.+++..
T Consensus 231 g~~--~~~~l~~~g~l~~~~~~~H~~~~~~~~~~~la~~g~~v~~~P~sn~~l~~g 284 (419)
T PRK06687 231 GKR--PLAFLEELGYLDHPSVFAHGVELNEREIERLASSQVAIAHNPISNLKLASG 284 (419)
T ss_pred CcC--HHHHHHHcCCCCCCeEEEEEecCCHHHHHHHHHcCCeEEECcHHhhhhccC
Confidence 975 99999999999999999999999999998 99999988764
|
|
| >PRK07203 putative chlorohydrolase/aminohydrolase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.9e-43 Score=322.16 Aligned_cols=271 Identities=25% Similarity=0.436 Sum_probs=230.0
Q ss_pred EEEEccEEEecCCCCceeeeeeEEEeCCEEEEecCChhhhhhhcCCCceEEeCCCCEeeccccccCccchhhhhhcccC-
Q 022028 21 MILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIAD- 99 (304)
Q Consensus 21 ~li~~~~ii~~~~~~~~~~~~~I~I~~g~I~~i~~~~~~~~~~~~~~~~vID~~g~iv~PG~ID~H~Hl~~s~~~g~~~- 99 (304)
++|+|++|+++++...++++++|.|+||+|++|++..+....+ .+.++||++|++|+|||||+|+|++++.++|...
T Consensus 2 ~li~~~~i~~~~~~~~~~~~~~v~I~~g~I~~Vg~~~~~~~~~--~~~~viD~~g~lv~PGfID~H~H~~~~~~rg~~~~ 79 (442)
T PRK07203 2 LLIGNGTAITRDPAKPVIEDGAIAIEGNVIVEIGTTDELKAKY--PDAEFIDAKGKLIMPGLINSHNHIYSGLARGMMAN 79 (442)
T ss_pred EEEECCEEEeCCCCCceeeccEEEEECCEEEEEeCchhhcccc--CCCeEEeCCCCEEecceeeccccchhhhhcccccc
Confidence 6799999998765545778899999999999999753322111 2458999999999999999999999998888642
Q ss_pred ---CCCccccccccccCccCCCChHHHHHHHHHHHHHHHhcCcceeecCCCC------CHHHHHHHHHHcCCeEEeeccc
Q 022028 100 ---DVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQ------HVSEMAKAVELLGLRACLVQST 170 (304)
Q Consensus 100 ---~~~~~~~l~~~~~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~d~~~~------~~~~~~~~~~~~gir~~~~~~~ 170 (304)
..++.+|+...+|+....++++++|.+++.++.+++++||||++|+... ..+...+++++.|+|.+++..+
T Consensus 80 ~~~~~~l~~~l~~~~~~~~~~~t~e~~~~~a~~~~~e~l~~GtTt~~d~~~~~~~~~~~~~~~~~a~~~~GiR~~~~~~~ 159 (442)
T PRK07203 80 IPPPPDFISILKNLWWRLDRALTLEDVYYSALICSLEAIKNGVTTVFDHHASPNYIGGSLFTIADAAKKVGLRAMLCYET 159 (442)
T ss_pred cCCCCCHHHHHHhheehhhhcCCHHHHHHHHHHHHHHHHHcCceEEEccccccccccchHHHHHHHHHHhCCeEEEeccc
Confidence 2478899988888888889999999999999999999999999987521 2356778899999999988777
Q ss_pred ccCCCCCCCCcccCChHHHHHHHHHHHHHHcCCCCCCeEEEEeeCcccCCCHHHHHHHHHHHHHhCCeeeEEecCChhhH
Q 022028 171 MDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYEN 250 (304)
Q Consensus 171 ~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~e~l~~~~~~a~~~~~~~~~H~~E~~~~~ 250 (304)
+|.+ ......+.++...++++.+....++++...++|+++++++++.++.+.++|+++|+++++|++|+..+.
T Consensus 160 ~d~~-------~~~~~~~~l~~~~~~~~~~~~~~~~~v~~~~~p~~~~~~s~~~l~~~~~lA~~~g~~i~~H~~E~~~e~ 232 (442)
T PRK07203 160 SDRD-------GEKELQEGVEENIRFIKHIDEAKDDMVEAMFGLHASFTLSDATLEKCREAVKETGRGYHIHVAEGIYDV 232 (442)
T ss_pred ccCC-------cchhHHHHHHHHHHHHHHhcCCCCCceEEEEccCCCcCcCHHHHHHHHHHHHHcCCcEEEEecCChHHH
Confidence 6532 111234566777888888876556689999999999999999999999999999999999999999999
Q ss_pred HHHHHhcCCCCCHHHHHHHhCCCCCCeeEEEeccCCcchhc-----------ccccccccccc
Q 022028 251 QVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEVN-----------CTFGNFKYAVH 302 (304)
Q Consensus 251 ~~~~~~~g~~~~~~~~l~~~g~l~~~~~~~H~~~l~~~di~-----------~p~sN~~l~~~ 302 (304)
+.+.++||.+ +++++++.|+|+++++++||++++++|++ ||.||+++++.
T Consensus 233 ~~~~~~~g~~--~v~~l~~~Gll~~~~~~~H~~~~~~~d~~~la~~g~~v~~~P~sn~~l~~g 293 (442)
T PRK07203 233 SDSHKKYGKD--IVERLADFGLLGEKTLAAHCIYLSDEEIDLLKETDTFVVHNPESNMGNAVG 293 (442)
T ss_pred HHHHHHcCCC--HHHHHHhCCCCCCCcEEEEeecCCHHHHHHHHhcCCeEEECchhhhhcccC
Confidence 9999999985 99999999999999999999999999997 99999998764
|
|
| >PRK09045 N-ethylammeline chlorohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-40 Score=306.80 Aligned_cols=273 Identities=27% Similarity=0.451 Sum_probs=231.1
Q ss_pred CcccEEEEccEEEecCCCCceeeeeeEEEeCCEEEEecCChhhhhhhcCCCceEEeCCCCEeeccccccCccchhhhhhc
Q 022028 17 SSSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKG 96 (304)
Q Consensus 17 ~~~~~li~~~~ii~~~~~~~~~~~~~I~I~~g~I~~i~~~~~~~~~~~~~~~~vID~~g~iv~PG~ID~H~Hl~~s~~~g 96 (304)
.+.+++|+|++|+++++..+++++++|+|+||+|++|++..+....+ .+.++||++|++|+|||||+|+|+.++.++|
T Consensus 5 ~~~~~li~~~~v~~~~~~~~~~~~~~v~i~~g~I~~Vg~~~~~~~~~--~~~~~iD~~g~~v~PG~id~H~Hl~~~~~~g 82 (443)
T PRK09045 5 EPVDLLIEARWIVPVEPAGVVLEDHAVAIRDGRIVAILPRAEARARY--AAAETVELPDHVLIPGLINAHTHAAMSLLRG 82 (443)
T ss_pred ccccEEEEccEEEEeCCCceEeeccEEEEECCEEEEecCcccccccC--CcceEEeCCCCEEecCEeccccChhhHhhhh
Confidence 34578999999999886567889999999999999999865432222 2568999999999999999999999999998
Q ss_pred ccCCCCccccccccccCcc-CCCChHHHHHHHHHHHHHHHhcCcceeecCCCCCHHHHHHHHHHcCCeEEeecccccCCC
Q 022028 97 IADDVDLMTWLHDRIWPYE-SNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQHVSEMAKAVELLGLRACLVQSTMDCGE 175 (304)
Q Consensus 97 ~~~~~~~~~~l~~~~~~~~-~~~~~e~~~~~~~~~~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~gir~~~~~~~~d~g~ 175 (304)
...+.++.+|+...+|+.+ ..+++++.+..++.++.+++++||||++|+. .+.+...+++.+.|+|.+++...++..
T Consensus 83 ~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~G~Ttv~d~~-~~~~~~~~~~~~~G~R~~~~~~~~~~~- 160 (443)
T PRK09045 83 LADDLPLMTWLQDHIWPAEGAWVSEEFVRDGTLLAIAEMLRGGTTCFNDMY-FFPEAAAEAAHQAGMRAQIGMPVLDFP- 160 (443)
T ss_pred ccCCCCHHHHHHhhhhhhhhccCCHHHHHHHHHHHHHHHHhcCCcEEEecc-ccHHHHHHHHHHcCCeEEEecccccCC-
Confidence 8777888899987776544 4478999999999999999999999999976 455667888899999999888776532
Q ss_pred CCCCCcccCChHHHHHHHHHHHHHHcCCCCCCeEEEEeeCcccCCCHHHHHHHHHHHHHhCCeeeEEecCChhhHHHHHH
Q 022028 176 GLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMD 255 (304)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~e~l~~~~~~a~~~~~~~~~H~~E~~~~~~~~~~ 255 (304)
..+ ....++.++...++++.+.. .+++++.++++++++++++.+++++++|+++|+++++|++|+..+.+.+.+
T Consensus 161 ---~~~-~~~~~~~l~~~~~~~~~~~~--~~~i~~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~~e~~~~~~~~~~ 234 (443)
T PRK09045 161 ---TAW-ASDADEYLAKGLELHDQWRH--HPLISTAFAPHAPYTVSDENLERIRTLAEQLDLPIHIHLHETAQEIADSLK 234 (443)
T ss_pred ---Ccc-ccCHHHHHHHHHHHHHHhcC--CCcEEEEEeCCCCCCCCHHHHHHHHHHHHHcCCCEEEeecCcHHHHHHHHH
Confidence 111 23456677777777777753 478999999999999999999999999999999999999999999998888
Q ss_pred hcCCCCCHHHHHHHhCCCCCCeeEEEeccCCcchhc-----------cccccccccc
Q 022028 256 TRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEVN-----------CTFGNFKYAV 301 (304)
Q Consensus 256 ~~g~~~~~~~~l~~~g~l~~~~~~~H~~~l~~~di~-----------~p~sN~~l~~ 301 (304)
.+|.+ +++++++.|+++++++++||+++++++++ ||.+|+.++.
T Consensus 235 ~~g~~--~~~~l~~~g~l~~r~~~~H~~~l~~~~~~~la~~g~~i~~~P~~~~~~~~ 289 (443)
T PRK09045 235 QHGQR--PLARLARLGLLGPRLIAVHMTQLTDAEIALLAETGCSVVHCPESNLKLAS 289 (443)
T ss_pred HhCCC--HHHHHHHcCCCCCCeEEEEecCCCHHHHHHHHHcCCeEEECHHHHhhhcc
Confidence 89974 99999999999999999999999999987 9999987654
|
|
| >PRK12393 amidohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-40 Score=306.48 Aligned_cols=277 Identities=23% Similarity=0.311 Sum_probs=228.1
Q ss_pred cccEEEEccE-EEecCCCCceeeee-eEEEeCCEEEEecCChhhhhhhcCCCceEEeCCCCEeeccccccCccchhhhhh
Q 022028 18 SSTMILHNAV-IVTMDKESRVFRNG-GVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAK 95 (304)
Q Consensus 18 ~~~~li~~~~-ii~~~~~~~~~~~~-~I~I~~g~I~~i~~~~~~~~~~~~~~~~vID~~g~iv~PG~ID~H~Hl~~s~~~ 95 (304)
|.+++|+|++ |++.++..+++.++ +|+|+||+|++|++... ..+.++||+.|++|+|||||+|+|+.++.+|
T Consensus 1 ~~~~li~~~~~v~~~~~~~~~~~~~~~v~I~~g~I~~Vg~~~~------~~~~~viD~~g~~v~PG~VnaH~Hl~~~~~r 74 (457)
T PRK12393 1 MPSLLIRNAAAIMTGLPGDAARLGGPDIRIRDGRIAAIGALTP------LPGERVIDATDCVVYPGWVNTHHHLFQSLLK 74 (457)
T ss_pred CCcEEEECCeEEEecCCCccccccCceEEEECCEEEEEeccCC------CCCCeEEeCCCCEEecCEeecccCccccccc
Confidence 4568999995 78766543445555 89999999999997311 1256899999999999999999999999999
Q ss_pred ccc--CCCCccccccccccCccCCCChHHHHHHHHHHHHHHHhcCcceeecCCCC--------CHHHHHHHHHHcCCeEE
Q 022028 96 GIA--DDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQ--------HVSEMAKAVELLGLRAC 165 (304)
Q Consensus 96 g~~--~~~~~~~~l~~~~~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~d~~~~--------~~~~~~~~~~~~gir~~ 165 (304)
|.. .+.++.+|+....|+.+..++++++|..++.++.++|++||||++|+... ..+.+++++.+.|+|.+
T Consensus 75 g~~~~~~~~~~~wl~~~~~~~~~~~~~~~~~~~a~~~~~e~l~~G~Ttv~d~~~~~~~~~~~~~~~~~~~a~~~~G~R~~ 154 (457)
T PRK12393 75 GVPAGINQSLTAWLAAVPYRFRARFDEDLFRLAARIGLVELLRSGCTTVADHHYLYHPGMPFDTGDILFDEAEALGMRFV 154 (457)
T ss_pred ccccccCCchHHHhhhCcchhhhhCCHHHHHHHHHHHHHHHHhCCccEeecchhhcccccccchHHHHHHHHHHcCCeEE
Confidence 874 35678899988788888889999999999999999999999999997421 24678899999999999
Q ss_pred eecccccCCCCCCC----CcccCChHHHHHHHHHHHHHHcCCC-CCCeEEEEeeCcc-cCCCHHHHHHHHHHHHHhCCee
Q 022028 166 LVQSTMDCGEGLPA----SWAVRTTDDCIQSQKELYAKHHHAA-DGRIRIWFGIRQI-MNATDRLLLETRDMAREFKTGI 239 (304)
Q Consensus 166 ~~~~~~d~g~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~~~~~~~~~-~~~~~e~l~~~~~~a~~~~~~~ 239 (304)
+++...+...+... .......++.++..+++++++.... .+++.+.++|+.+ ++++++.++++.++|+++|+++
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~~a~~~g~~~ 234 (457)
T PRK12393 155 LCRGGATQTRGDHPGLPTALRPETLDQMLADVERLVSRYHDASPDSLRRVVVAPTTPTFSLPPELLREVARAARGMGLRL 234 (457)
T ss_pred EEccccccccccCCCCCCcccccCHHHHHHHHHHHHHHhcCCCcCCceEEEEcCCCCCCCcCHHHHHHHHHHHHHcCCeE
Confidence 88765543211111 1112335666777788888876532 3467888999988 8999999999999999999999
Q ss_pred eEEecCChhhHHHHHHhcCCCCCHHHHHHHhCCCCCCeeEEEeccCCcchhc-----------ccccccccccc
Q 022028 240 HMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEVN-----------CTFGNFKYAVH 302 (304)
Q Consensus 240 ~~H~~E~~~~~~~~~~~~g~~~~~~~~l~~~g~l~~~~~~~H~~~l~~~di~-----------~p~sN~~l~~~ 302 (304)
++|+.|+.++++.+++.+|.+ +++++++.|+|+++++++||++++++|++ ||.||.++|..
T Consensus 235 ~~H~~e~~~~~~~~~~~~g~~--~~~~l~~~g~l~~~~~~~H~~~l~~~d~~~la~~g~~v~~~P~sn~~lg~g 306 (457)
T PRK12393 235 HSHLSETVDYVDFCREKYGMT--PVQFVAEHDWLGPDVWFAHLVKLDAEEIALLAQTGTGIAHCPQSNGRLGSG 306 (457)
T ss_pred EEEeCCCHHHHHHHHHHhCCC--HHHHHHHcCCCCCCeEEEEEecCCHHHHHHHHHcCCeEEECchhhhhhccc
Confidence 999999999999999999975 99999999999999999999999999998 99999999864
|
|
| >cd01303 GDEase Guanine deaminase (GDEase) | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-40 Score=304.59 Aligned_cols=270 Identities=22% Similarity=0.284 Sum_probs=225.2
Q ss_pred EEecCCCCceeeeeeEEEeCCEEEEecCChhhhhhhcCCCceEEeCCCCEeeccccccCccchhhhhhcccCCCCccccc
Q 022028 28 IVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIADDVDLMTWL 107 (304)
Q Consensus 28 ii~~~~~~~~~~~~~I~I~~g~I~~i~~~~~~~~~~~~~~~~vID~~g~iv~PG~ID~H~Hl~~s~~~g~~~~~~~~~~l 107 (304)
++++|...+++++++|+|+||+|++|++..+.....+ .+.++||++|++|+|||||+|+|++++.+||...+.++.+|+
T Consensus 14 ~~~~d~~~~~~~~g~V~v~~g~I~~vG~~~~~~~~~~-~~~~viD~~g~~v~PGlVn~H~Hl~~~~~rg~~~~~~l~~wl 92 (429)
T cd01303 14 LELVEDALRVVEDGLIVVVDGNIIAAGAAETLKRAAK-PGARVIDSPNQFILPGFIDTHIHAPQYANIGSGLGEPLLDWL 92 (429)
T ss_pred ccccCCcEEEECCeEEEEECCEEEEeCchhhhhhhcC-CCceEEcCCCCEEecceeeeeecccccccccccCCCcHHHHH
Confidence 4566777788999999999999999998654321112 246899999999999999999999999999987788999999
Q ss_pred cccccCccCC-CChHHHHHHHHHHHHHHHhcCcceeecCCCC---CHHHHHHHHHHcCCeEEeecccccCCCCCCCCccc
Q 022028 108 HDRIWPYESN-MTEEDSYISTLLCGIELIHSGVTCFAEAGGQ---HVSEMAKAVELLGLRACLVQSTMDCGEGLPASWAV 183 (304)
Q Consensus 108 ~~~~~~~~~~-~~~e~~~~~~~~~~~~~l~~GvTtv~d~~~~---~~~~~~~~~~~~gir~~~~~~~~d~g~~~~~~~~~ 183 (304)
...+|+.+.. .++++.+..++.++.+++++||||++++... ..+..++++.+.|+|.++++..++... +....
T Consensus 93 ~~~~~~~e~~~~~~~~~~~~a~~~~~e~l~~GvTtv~d~~~~~~~~~~~~~~a~~~~G~R~~~~~~~~~~~~---~~~~~ 169 (429)
T cd01303 93 ETYTFPEEAKFADPAYAREVYGRFLDELLRNGTTTACYFATIHPESTEALFEEAAKRGQRAIAGKVCMDRNA---PEYYR 169 (429)
T ss_pred HhhhhHHHHhcCCHHHHHHHHHHHHHHHHhCCceEEEeecccChhHHHHHHHHHHHhCCeEEEeeeeecCCC---Ccccc
Confidence 8877777665 5778888899999999999999999998643 345778889999999999887765421 22222
Q ss_pred CChHHHHHHHHHHHHHHcCCCCCCeEEEEeeCcccCCCHHHHHHHHHHHHHhC-CeeeEEecCChhhHHHHHHhcCCCCC
Q 022028 184 RTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFK-TGIHMHVAEIPYENQVVMDTRKVDHG 262 (304)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~e~l~~~~~~a~~~~-~~~~~H~~E~~~~~~~~~~~~g~~~~ 262 (304)
....+.++...++++.+... .+.+...++|+.+++++++.++++.++|++++ +++++|++|+..+.+.+++.+|...+
T Consensus 170 ~~~~~~~~~~~~~i~~~~~~-~~~v~~~~~p~~~~~~s~e~l~~~~~~A~~~g~~~v~~H~~e~~~e~~~~~~~~g~~~~ 248 (429)
T cd01303 170 DTAESSYRDTKRLIERWHGK-SGRVKPAITPRFAPSCSEELLAALGKLAKEHPDLHIQTHISENLDEIAWVKELFPGARD 248 (429)
T ss_pred cCHHHHHHHHHHHHHHHhCc-CCceEEEEecCcCCcCCHHHHHHHHHHHHHCCCCeEEEeeCCCHHHHHHHHHHcCCCCC
Confidence 23455667778888888764 46788899999999999999999999999999 99999999999999999999983235
Q ss_pred HHHHHHHhCCCCCCeeEEEeccCCcchhc-----------ccccccccccc
Q 022028 263 TVTFLDKIEFLQNNLLSAHTVWVNHTEVN-----------CTFGNFKYAVH 302 (304)
Q Consensus 263 ~~~~l~~~g~l~~~~~~~H~~~l~~~di~-----------~p~sN~~l~~~ 302 (304)
+++++++.|+|+++++++||+++++++++ ||.||.+|+..
T Consensus 249 p~~~l~~~G~l~~~~~l~H~~~l~~~~~~~l~~~g~~v~~~P~sn~~l~~g 299 (429)
T cd01303 249 YLDVYDKYGLLTEKTVLAHCVHLSEEEFNLLKERGASVAHCPTSNLFLGSG 299 (429)
T ss_pred HHHHHHHCCCCCCCcEEEeCCCCCHHHHHHHHHcCCEEEECccchhhhccC
Confidence 99999999999999999999999999987 99999998764
|
Guanine deaminase is an aminohydrolase responsible for the conversion of guanine to xanthine and ammonia, the first step to utilize guanine as a nitrogen source. This reaction also removes the guanine base from the pool and therefore can play a role in the regulation of cellular GTP and the guanylate nucleotide pool. |
| >PRK09228 guanine deaminase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-40 Score=302.24 Aligned_cols=277 Identities=22% Similarity=0.266 Sum_probs=225.3
Q ss_pred ccEEEEccEEE-ecC-------CCCceeeeeeEEEeCCEEEEecCChhhhhhhcCCCceEEeCCCCEeeccccccCccch
Q 022028 19 STMILHNAVIV-TMD-------KESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTS 90 (304)
Q Consensus 19 ~~~li~~~~ii-~~~-------~~~~~~~~~~I~I~~g~I~~i~~~~~~~~~~~~~~~~vID~~g~iv~PG~ID~H~Hl~ 90 (304)
+.+++++..+. +.. +..+++++++|+|+||||++|++..+....++ .+.++||++|++|+|||||+|+|+.
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~I~I~~g~I~~Vg~~~~~~~~~~-~~~~viD~~g~lv~PGlVn~H~H~~ 80 (433)
T PRK09228 2 TTKAYRGRLLHFTADPAEVDDEDALRYIEDGLLLVEDGRIVAAGPYAELRAQLP-ADAEVTDYRGKLILPGFIDTHIHYP 80 (433)
T ss_pred ceEEEEEEEEccCCCccccCCCCcEEEECCeEEEEECCEEEEEcChHHhhhhcC-CCCeEEeCCCCEEecceeccccccc
Confidence 44566666555 222 34568899999999999999998654332222 1358999999999999999999999
Q ss_pred hhhhhcccCCCCccccccccccCccCC-CChHHHHHHHHHHHHHHHhcCcceeecCCCC---CHHHHHHHHHHcCCeEEe
Q 022028 91 QQLAKGIADDVDLMTWLHDRIWPYESN-MTEEDSYISTLLCGIELIHSGVTCFAEAGGQ---HVSEMAKAVELLGLRACL 166 (304)
Q Consensus 91 ~s~~~g~~~~~~~~~~l~~~~~~~~~~-~~~e~~~~~~~~~~~~~l~~GvTtv~d~~~~---~~~~~~~~~~~~gir~~~ 166 (304)
++..+|.. +.++.+|+...+|+.+.. .++++.+..++.++.+++++||||++|+... ..+.+.+++.+.|+|.++
T Consensus 81 ~~~~~g~~-~~~l~~wl~~~~~~~e~~~~~~~~~~~~a~~~~~e~l~~G~Ttv~d~~~~~~~~~~~~~~a~~~~GiR~~~ 159 (433)
T PRK09228 81 QTDMIASY-GEQLLDWLNTYTFPEERRFADPAYAREVAEFFLDELLRNGTTTALVFGTVHPQSVDALFEAAEARNMRMIA 159 (433)
T ss_pred chhhccCC-chHHHHHHHhhhhHHHHHhCCHHHHHHHHHHHHHHHHhCCceEEEeccccCHHHHHHHHHHHHHcCCeEEe
Confidence 99888743 446889998877776654 4778889999999999999999999997543 246778889999999999
Q ss_pred ecccccCCCCCCCCcccCChHHHHHHHHHHHHHHcCCCCCCeEEEEeeCcccCCCHHHHHHHHHHHHHh-CCeeeEEecC
Q 022028 167 VQSTMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREF-KTGIHMHVAE 245 (304)
Q Consensus 167 ~~~~~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~e~l~~~~~~a~~~-~~~~~~H~~E 245 (304)
+..+++.+ .+........+.++..+++++++... +++++.++|+.+++++++.++++.++|+++ ++++++|++|
T Consensus 160 ~~~~~~~~---~~~~~~~~~~~~l~~~~~~~~~~~~~--~~~~~~~~p~~~~t~s~~~l~~~~~lA~~~~~~~i~~Hl~E 234 (433)
T PRK09228 160 GKVLMDRN---APDGLRDTAESGYDDSKALIERWHGK--GRLLYAITPRFAPTSTPEQLEAAGALAREHPDVWIQTHLSE 234 (433)
T ss_pred eeeeecCC---CCcccccCHHHHHHHHHHHHHHHhCC--CCceEEEECCcCCcCCHHHHHHHHHHHHHCCCCceEEeecC
Confidence 88777642 12222234556677788888888653 578899999999999999999999999998 9999999999
Q ss_pred ChhhHHHHHHhcCCCCCHHHHHHHhCCCCCCeeEEEeccCCcchhc-----------ccccccccccc
Q 022028 246 IPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEVN-----------CTFGNFKYAVH 302 (304)
Q Consensus 246 ~~~~~~~~~~~~g~~~~~~~~l~~~g~l~~~~~~~H~~~l~~~di~-----------~p~sN~~l~~~ 302 (304)
+..+.+.+.+.+|.+.++++++++.|+|+++++++||++++++|++ ||.||++|+..
T Consensus 235 ~~~e~~~~~~~~g~~~~~~~~l~~~G~l~~~~~~~H~~~l~~~~~~~la~~g~~v~~~P~sn~~lg~g 302 (433)
T PRK09228 235 NLDEIAWVKELFPEARDYLDVYERYGLLGPRAVFAHCIHLEDRERRRLAETGAAIAFCPTSNLFLGSG 302 (433)
T ss_pred ChhHHHHHHHHcCCCCCHHHHHHHcCCCCCCeEEEeccCCCHHHHHHHHHcCCeEEECCccHHhhcCC
Confidence 9999999999998755689999999999999999999999999887 99999998764
|
|
| >PRK08203 hydroxydechloroatrazine ethylaminohydrolase; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.1e-40 Score=302.55 Aligned_cols=274 Identities=27% Similarity=0.452 Sum_probs=229.0
Q ss_pred EEEEccEEEecCCCCceeeeeeEEEeCCEEEEecCChhhhhhhcCCCceEEeCCCCEeeccccccCccchhhhhhcc--c
Q 022028 21 MILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGI--A 98 (304)
Q Consensus 21 ~li~~~~ii~~~~~~~~~~~~~I~I~~g~I~~i~~~~~~~~~~~~~~~~vID~~g~iv~PG~ID~H~Hl~~s~~~g~--~ 98 (304)
+++.++.|+++++..+++.+++|+|+||+|++|++..+.+ ..+.++||+.|++|+|||||+|+|++++.+++. .
T Consensus 4 ~i~~~~~v~~~~~~~~~~~~~~v~I~~g~I~~Vg~~~~~~----~~~~~vID~~g~~v~PGlVn~H~H~~~~~~~g~~~~ 79 (451)
T PRK08203 4 WIKNPLAIVTMDAARREIADGGLVVEGGRIVEVGPGGALP----QPADEVFDARGHVVTPGLVNTHHHFYQTLTRALPAA 79 (451)
T ss_pred EEEeccEEEEeCCCceEeeccEEEEECCEEEEEeCCccCC----CCCCeEEeCCCCEEecceEeccccccchhccccccc
Confidence 4556679999887667889999999999999999875421 124689999999999999999999999999887 5
Q ss_pred CCCCccccccccccCccCCCChHHHHHHHHHHHHHHHhcCcceeecCCCC-------CHHHHHHHHHHcCCeEEeecccc
Q 022028 99 DDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQ-------HVSEMAKAVELLGLRACLVQSTM 171 (304)
Q Consensus 99 ~~~~~~~~l~~~~~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~d~~~~-------~~~~~~~~~~~~gir~~~~~~~~ 171 (304)
.+.++.+|+.. .++....+++++++..++.++.+++++||||++|+... ..+..++++.+.|+|.+++...+
T Consensus 80 ~~~~~~~~~~~-~~~~~~~~~~e~~~~~a~~~~~e~l~~G~Ttv~d~~~~~~~~~~~~~~~~~~a~~~~G~R~~~~~~~~ 158 (451)
T PRK08203 80 QDAELFPWLTT-LYPVWARLTPEMVRVATQTALAELLLSGCTTSSDHHYLFPNGLRDALDDQIEAAREIGMRFHATRGSM 158 (451)
T ss_pred CCCcHHHHHHH-HhHHHHhCCHHHHHHHHHHHHHHHHhcCcCEEEcceeeccccccchHHHHHHHHHHcCCeEEEeccee
Confidence 67788899865 45666678999999999999999999999999997522 14567899999999999887665
Q ss_pred cCCC---CCCCCcccCChHHHHHHHHHHHHHHcCCCC-CCeEEEEeeCcccCCCHHHHHHHHHHHHHhCCeeeEEecCCh
Q 022028 172 DCGE---GLPASWAVRTTDDCIQSQKELYAKHHHAAD-GRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIP 247 (304)
Q Consensus 172 d~g~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~i~~~~~~~~~~~~~~e~l~~~~~~a~~~~~~~~~H~~E~~ 247 (304)
+.+. +.++.......++.++..+++++++..... +++++.++++++++++++.+++++++|+++|+++++|++|+.
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~i~~~~~~~~~~~i~~~~~~~~~~~~~~e~l~~~~~~A~~~g~~v~~H~~e~~ 238 (451)
T PRK08203 159 SLGESDGGLPPDSVVEDEDAILADSQRLIDRYHDPGPGAMLRIALAPCSPFSVSRELMRESAALARRLGVRLHTHLAETL 238 (451)
T ss_pred ecCCccCCCCccccccCHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCCCCcCCHHHHHHHHHHHHHcCCcEEEEeCCCH
Confidence 4321 122232233456777788888888865433 688999999999999999999999999999999999999999
Q ss_pred hhHHHHHHhcCCCCCHHHHHHHhCCCCCCeeEEEeccCCcchhc-----------cccccccccc
Q 022028 248 YENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEVN-----------CTFGNFKYAV 301 (304)
Q Consensus 248 ~~~~~~~~~~g~~~~~~~~l~~~g~l~~~~~~~H~~~l~~~di~-----------~p~sN~~l~~ 301 (304)
.+.+.+.+.+|.+ +++++.+.|+++++++++||++++++|++ ||.+|.+++.
T Consensus 239 ~~~~~~~~~~g~~--~~~~l~~~g~l~~~~~~~H~~~l~~~~~~~la~~g~~v~~~P~~~~~l~~ 301 (451)
T PRK08203 239 DEEAFCLERFGMR--PVDYLEDLGWLGPDVWLAHCVHLDDAEIARLARTGTGVAHCPCSNMRLAS 301 (451)
T ss_pred HHHHHHHHHhCCC--HHHHHHHcCCCCCCeEEEEEeCCCHHHHHHHHhcCCeEEECcHHhhhhcc
Confidence 9999999989985 99999999999999999999999999987 9999988874
|
|
| >PRK07228 N-ethylammeline chlorohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-39 Score=299.27 Aligned_cols=273 Identities=34% Similarity=0.567 Sum_probs=233.0
Q ss_pred EEEEccEEEecCCCCceeeeeeEEEeCCEEEEecCChhhhhhhcCCCceEEeCCCCEeeccccccCccchhhhhhcccCC
Q 022028 21 MILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIADD 100 (304)
Q Consensus 21 ~li~~~~ii~~~~~~~~~~~~~I~I~~g~I~~i~~~~~~~~~~~~~~~~vID~~g~iv~PG~ID~H~Hl~~s~~~g~~~~ 100 (304)
++|+|++|+++++. ..+++++|+|+||+|++|++..++ ....++||++|++|+|||||+|+|+.++..++...+
T Consensus 3 ~~i~~~~vi~~~~~-~~~~~g~V~I~dg~I~~vg~~~~~-----~~~~~vID~~G~~vlPGlId~H~H~~~~~~~g~~~~ 76 (445)
T PRK07228 3 ILIKNAGIVTMNAK-REIVDGDVLIEDDRIAAVGDRLDL-----EDYDDHIDATGKVVIPGLIQGHIHLCQTLFRGIADD 76 (445)
T ss_pred EEEEccEEEecCCC-cEecccEEEEECCEEEEecCCccc-----CcCCeEEeCCCCEEecCEEecccCCccccceeccCC
Confidence 78999999998754 456899999999999999986432 125689999999999999999999999888888777
Q ss_pred CCccccccccccCccCCCChHHHHHHHHHHHHHHHhcCcceeecCCCC-CHHHHHHHHHHcCCeEEeecccccCCCCCCC
Q 022028 101 VDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQ-HVSEMAKAVELLGLRACLVQSTMDCGEGLPA 179 (304)
Q Consensus 101 ~~~~~~l~~~~~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~d~~~~-~~~~~~~~~~~~gir~~~~~~~~d~g~~~~~ 179 (304)
.++.+|+...+++.+..+++++.+..++.++.++|++||||++|+.+. ......+++.+.|+|.+.++.+++.+.. .+
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~e~L~~GvTtv~d~~~~~~~~~~~~a~~~~g~r~~~~~~~~~~~~~-~p 155 (445)
T PRK07228 77 LELLDWLKDRIWPLEAAHDAESMYYSALLGIGELIESGTTTIVDMESVHHTDSAFEAAGESGIRAVLGKVMMDYGDD-VP 155 (445)
T ss_pred CCHHHHHHhhhhhhhhhCCHHHHHHHHHHHHHHHHhcCceEEEccccccChHHHHHHHHHcCCeEEEecceecCCcC-CC
Confidence 889999988888888889999999999999999999999999998743 3567788999999999998888775421 12
Q ss_pred CcccCChHHHHHHHHHHHHHHcCCCCCCeEEEEeeCcccCCCHHHHHHHHHHHHHhCCeeeEEecCChhhHHHHHHhcCC
Q 022028 180 SWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKV 259 (304)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~e~l~~~~~~a~~~~~~~~~H~~E~~~~~~~~~~~~g~ 259 (304)
........+.+++..++++.+.....+.+...++|+...+++++.+++++++|+++|+++++|+.|+..+.+.+++.+|.
T Consensus 156 ~~~~~~~~~~l~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~e~~~~~~~~~~~~g~ 235 (445)
T PRK07228 156 EGLQEDTEASLAESVRLLEKWHGADNGRIRYAFTPRFAVSCTEELLRGVRDLADEYGVRIHTHASENRGEIETVEEETGM 235 (445)
T ss_pred ccccccHHHHHHHHHHHHHHhcCCCCCceEEEEeCCCCCCCCHHHHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHhCC
Confidence 22223456777888889988865545667777888888889999999999999999999999999999999999999998
Q ss_pred CCCHHHHHHHhCCCCCCeeEEEeccCCcchhc-----------ccccccccccc
Q 022028 260 DHGTVTFLDKIEFLQNNLLSAHTVWVNHTEVN-----------CTFGNFKYAVH 302 (304)
Q Consensus 260 ~~~~~~~l~~~g~l~~~~~~~H~~~l~~~di~-----------~p~sN~~l~~~ 302 (304)
+ +++++++.|+++++++++||+++++++++ ||.+|..++..
T Consensus 236 ~--~~~~l~~~g~~~~~~~l~H~~~~~~~~~~~~~~~g~~v~~~P~~~~~~~~~ 287 (445)
T PRK07228 236 R--NIHYLDEVGLTGEDLILAHCVWLDEEEREILAETGTHVTHCPSSNLKLASG 287 (445)
T ss_pred C--HHHHHHHCCCCCCCcEEEEEecCCHHHHHHHHHcCCeEEEChHHhhhcccc
Confidence 5 99999999999999999999999999987 99999887653
|
|
| >PRK06380 metal-dependent hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-39 Score=295.93 Aligned_cols=260 Identities=31% Similarity=0.507 Sum_probs=221.8
Q ss_pred EEEEccEEEecCCCCceeeeeeEEEeCCEEEEecCChhhhhhhcCCCceEEeCCCCEeeccccccCccchhhhhhcccCC
Q 022028 21 MILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIADD 100 (304)
Q Consensus 21 ~li~~~~ii~~~~~~~~~~~~~I~I~~g~I~~i~~~~~~~~~~~~~~~~vID~~g~iv~PG~ID~H~Hl~~s~~~g~~~~ 100 (304)
++|+|++|++++.. ..+.+++|+|+||+|++|++..+ .+.++||++|++|+|||||+|+|+.++.+||..++
T Consensus 3 ~li~~~~v~~~~~~-~~~~~~~v~i~~g~I~~ig~~~~-------~~~~viD~~g~~v~PG~Vd~H~Hl~~~~~rg~~~~ 74 (418)
T PRK06380 3 ILIKNAWIVTQNEK-REILQGNVYIEGNKIVYVGDVNE-------EADYIIDATGKVVMPGLINTHAHVGMTASKGLFDD 74 (418)
T ss_pred EEEEeeEEEECCCC-ceeeeeeEEEECCEEEEecCCCC-------CCCEEEECCCCEEccCEEeeccCCCccccCCcccC
Confidence 68999999997643 35568999999999999998532 14589999999999999999999999999998888
Q ss_pred CCccccccccccCccCCCChHHHHHHHHHHHHHHHhcCcceeecCCCCCHHHHHHHHHHcCCeEEeecccccCCCCCCCC
Q 022028 101 VDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQHVSEMAKAVELLGLRACLVQSTMDCGEGLPAS 180 (304)
Q Consensus 101 ~~~~~~l~~~~~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~gir~~~~~~~~d~g~~~~~~ 180 (304)
.++.+|+.. .+++...+++++++..++.++.+++++||||++|+. ...+.+.+++.+.|+|.+++...++... ...
T Consensus 75 ~~l~~~~~~-~~~~~~~~~~e~~~~~~~~~~~e~l~~G~Tt~~d~~-~~~~~~~~a~~~~G~r~~~~~~~~~~~~--~~~ 150 (418)
T PRK06380 75 VDLEEFLMK-TFKYDSKRTREGIYNSAKLGMYEMINSGITAFVDLY-YSEDIIAKAAEELGIRAFLSWAVLDEEI--TTQ 150 (418)
T ss_pred CCHHHHHHH-HHhhhhcCCHHHHHHHHHHHHHHHHhcCCeEEEccc-cChHHHHHHHHHhCCeEEEecccccCCc--ccc
Confidence 899999987 678878899999999999999999999999999986 3456778999999999999877765321 011
Q ss_pred cccCChHHHHHHHHHHHHHHcCCCCCCeEEEEeeCcccCCCHHHHHHHHHHHHHhCCeeeEEecCChhhHHHHHHhcCCC
Q 022028 181 WAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVD 260 (304)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~e~l~~~~~~a~~~~~~~~~H~~E~~~~~~~~~~~~g~~ 260 (304)
....++...++++++.. .+++.+.++++++++++++.+++++++|+++|+++++|++|+..+...+.+++|.+
T Consensus 151 -----~~~~~~~~~~~~~~~~~--~~~v~~~~~~~~~~~~s~e~l~~~~~~A~~~g~~v~~H~~e~~~~~~~~~~~~g~~ 223 (418)
T PRK06380 151 -----KGDPLNNAENFIREHRN--EELVTPSIGVQGIYVANDETYLKAKEIAEKYDTIMHMHLSETRKEVYDHVKRTGER 223 (418)
T ss_pred -----cchHHHHHHHHHHHhcC--CCCeEEEEECCCCccCCHHHHHHHHHHHHHcCCCEEEEeCCcHHHHHHHHHHhCCC
Confidence 11234456666776653 36788999999999999999999999999999999999999988888788888985
Q ss_pred CCHHHHHHHhCCCCCCeeEEEeccCCcchhc-----------cccccccccc
Q 022028 261 HGTVTFLDKIEFLQNNLLSAHTVWVNHTEVN-----------CTFGNFKYAV 301 (304)
Q Consensus 261 ~~~~~~l~~~g~l~~~~~~~H~~~l~~~di~-----------~p~sN~~l~~ 301 (304)
+++++++.|+++++++++||++++++|++ ||.||.+++.
T Consensus 224 --~ie~~~~~g~l~~~~~~~H~~~l~~~d~~~la~~g~~v~~~P~sn~~l~~ 273 (418)
T PRK06380 224 --PVEHLEKIGFLNSKLIAAHCVWATYHEIKLLSKNGVKVSWNSVSNFKLGT 273 (418)
T ss_pred --HHHHHHHCCCCCCCeEEEEeecCCHHHHHHHHHcCCEEEECHHHHHhhcc
Confidence 99999999999999999999999999987 9999999876
|
|
| >PRK06038 N-ethylammeline chlorohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.7e-39 Score=293.94 Aligned_cols=266 Identities=35% Similarity=0.592 Sum_probs=229.0
Q ss_pred ccEEEEccEEEecCCCCceeeeeeEEEeCCEEEEecCChhhhhhhcCCCceEEeCCCCEeeccccccCccchhhhhhccc
Q 022028 19 STMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIA 98 (304)
Q Consensus 19 ~~~li~~~~ii~~~~~~~~~~~~~I~I~~g~I~~i~~~~~~~~~~~~~~~~vID~~g~iv~PG~ID~H~Hl~~s~~~g~~ 98 (304)
++++|+|++|++++. ..+.+++|+|+||+|++|++..+. .+.++||+.|++|+|||||+|+|+.++.++|..
T Consensus 2 ~~~~~~~~~i~~~~~--~~~~~~~v~v~~g~I~~i~~~~~~------~~~~~id~~g~~v~PG~vd~H~H~~~~~~~g~~ 73 (430)
T PRK06038 2 ADIIIKNAYVLTMDA--GDLKKGSVVIEDGTITEVSESTPG------DADTVIDAKGSVVMPGLVNTHTHAAMTLFRGYA 73 (430)
T ss_pred CCEEEEccEEEECCC--CeeeccEEEEECCEEEEecCCCCC------CCCEEEeCCCCEEecCeeecccCcchhhhhhcc
Confidence 357899999998763 356788999999999999986321 245899999999999999999999999999987
Q ss_pred CCCCccccccccccCccCCCChHHHHHHHHHHHHHHHhcCcceeecCCCCCHHHHHHHHHHcCCeEEeecccccCCCCCC
Q 022028 99 DDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQHVSEMAKAVELLGLRACLVQSTMDCGEGLP 178 (304)
Q Consensus 99 ~~~~~~~~l~~~~~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~gir~~~~~~~~d~g~~~~ 178 (304)
.+.++.+|+....++....+++++++..++.++.+++++|+||++|+. .+.+...+++.+.|+|.+.+....+.+.
T Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~e~l~~G~Ttv~D~~-~~~~~~~~a~~~~GiR~~~~~~~~d~~~--- 149 (430)
T PRK06038 74 DDLPLAEWLNDHIWPAEAKLTAEDVYAGSLLACLEMIKSGTTSFADMY-FYMDEVAKAVEESGLRAALSYGMIDLGD--- 149 (430)
T ss_pred CCCCHHHHHHhhhhhchhcCCHHHHHHHHHHHHHHHHhcCceeEEccc-cCHHHHHHHHHHhCCeEEEEchhccCCC---
Confidence 778999999887777777889999999999999999999999999987 4566778889999999987765544321
Q ss_pred CCcccCChHHHHHHHHHHHHHHcCCCCCCeEEEEeeCcccCCCHHHHHHHHHHHHHhCCeeeEEecCChhhHHHHHHhcC
Q 022028 179 ASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRK 258 (304)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~e~l~~~~~~a~~~~~~~~~H~~E~~~~~~~~~~~~g 258 (304)
.......++...++++.+.....+.+...++|+++++++++++++++++|+++|+++++|+.|+..+...+.+.+|
T Consensus 150 ----~~~~~~~l~~~~~~i~~~~~~~~g~v~~~~~~~~~~~~s~e~l~~~~~~A~~~g~~v~~H~~e~~~~~~~~~~~~G 225 (430)
T PRK06038 150 ----DEKGEAELKEGKRFVKEWHGAADGRIKVMYGPHAPYTCSEEFLSKVKKLANKDGVGIHIHVLETEAELNQMKEQYG 225 (430)
T ss_pred ----ccchHHHHHHHHHHHHHhcCCCCCceEEEEeCCcCccCCHHHHHHHHHHHHHcCCcEEEEcCCCHHHHHHHHHHhC
Confidence 1224456777888888887655678888999999999999999999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHhCCCCCCeeEEEeccCCcchhc-----------ccccccccccc
Q 022028 259 VDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEVN-----------CTFGNFKYAVH 302 (304)
Q Consensus 259 ~~~~~~~~l~~~g~l~~~~~~~H~~~l~~~di~-----------~p~sN~~l~~~ 302 (304)
.+ +++++++.|+|+++++++||++++++|++ ||.+|..++..
T Consensus 226 ~~--~i~~l~~~g~l~~r~~~~H~~~l~~~~~~~la~~g~~v~~~P~~n~~~~~~ 278 (430)
T PRK06038 226 MC--SVNYLDDIGFLGPDVLAAHCVWLSDGDIEILRERGVNVSHNPVSNMKLASG 278 (430)
T ss_pred CC--HHHHHHHcCCCCCCeEEEEEecCCHHHHHHHHhcCCEEEEChHHhhhhccC
Confidence 85 99999999999999999999999999987 99999988754
|
|
| >PRK08418 chlorohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-39 Score=293.44 Aligned_cols=266 Identities=19% Similarity=0.244 Sum_probs=211.1
Q ss_pred EEEEccEEEecCCCCceeeeeeEEEeCCEEEEecCChhhhhhhcCCCceEEeCCCCEeeccccccCccchhhhhhcccCC
Q 022028 21 MILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIADD 100 (304)
Q Consensus 21 ~li~~~~ii~~~~~~~~~~~~~I~I~~g~I~~i~~~~~~~~~~~~~~~~vID~~g~iv~PG~ID~H~Hl~~s~~~g~~~~ 100 (304)
++|+|++|++++....++++++|.|+ |+|++|++..+....++ +.++||+.|++|+|||||+|+|+.++.+||..++
T Consensus 2 ~~i~~~~v~t~~~~~~~~~~~~v~v~-~~I~~ig~~~~~~~~~~--~~~vid~~g~~v~PG~Vn~H~H~~~~~~rg~~~~ 78 (408)
T PRK08418 2 KIIGASYIFTCDENFEILEDGAVVFD-DKILEIGDYENLKKKYP--NAKIQFFKNSVLLPAFINPHTHLEFSANKTTLDY 78 (408)
T ss_pred EEEEccEEEecCCCCceeeccEEEEC-CEEEEecCHHHHHhhCC--CCcEEecCCcEEccCccccccchhhhhhccccCC
Confidence 57899999997755567899999999 99999998644322222 3468999999999999999999999999998777
Q ss_pred CCccccccccccCccCCCChHHHHHHHHHHHHHHHhcCcceeecCCCCCHHHHHHHHHHcCCeEEeecccccCCCCCCCC
Q 022028 101 VDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQHVSEMAKAVELLGLRACLVQSTMDCGEGLPAS 180 (304)
Q Consensus 101 ~~~~~~l~~~~~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~gir~~~~~~~~d~g~~~~~~ 180 (304)
.++.+|+...+++.+ .+++++.+..++.++.+++++||||+.|+... ....+++.+.|+|.+++...++.. ..
T Consensus 79 ~~~~~wl~~~~~~~~-~l~~~~~~~~~~~~~~E~l~~GtTtv~d~~~~--~~~~~a~~~~GiR~~~~~~~~~~~----~~ 151 (408)
T PRK08418 79 GDFIPWLGSVINHRE-DLLEKCKGALIQQAINEMLKSGVGTIGAISSF--GIDLEICAKSPLRVVFFNEILGSN----AS 151 (408)
T ss_pred CchHHHHHHHhhhhh-hcCHHHHHHHHHHHHHHHHhcCceEEEEeecc--hhhHHHHHhcCCeEEEEeeeeCCC----cc
Confidence 788999987665553 47788888899999999999999999988642 233688899999998876554421 11
Q ss_pred cccCChHHHHHHHHHHHHHHcCCCCCCeEEEEeeCcccCCCHHHHHHHHHHHHHhCCeeeEEecCChhhHHHHHHhcCC-
Q 022028 181 WAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKV- 259 (304)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~e~l~~~~~~a~~~~~~~~~H~~E~~~~~~~~~~~~g~- 259 (304)
+. ....+...+.++.......++++..++|+++++|+++.++++.++|+++++++++|++|+..|++.+.+.+|.
T Consensus 152 ~~----~~~~~~~~~~~~~~~~~~~~~~~~~~aph~~~t~s~e~l~~~~~~A~~~~~~i~~H~~E~~~E~~~~~~~~G~~ 227 (408)
T PRK08418 152 AV----DELYQDFLARFEESKKFKSKKFIPAIAIHSPYSVHPILAKKALQLAKKENLLVSTHFLESKAEREWLEESKGWF 227 (408)
T ss_pred ch----hhhHHHHHHHHHhhhcccCCceeEEEeCCCCCCCCHHHHHHHHHHHHHcCCeEEEEecCCHHHHHHHHhccCch
Confidence 11 1111111122222211234678999999999999999999999999999999999999999999999998883
Q ss_pred -------------CCCHHHHHHHhCCCCCCeeEEEeccCCcchhc-----------ccccccccccc
Q 022028 260 -------------DHGTVTFLDKIEFLQNNLLSAHTVWVNHTEVN-----------CTFGNFKYAVH 302 (304)
Q Consensus 260 -------------~~~~~~~l~~~g~l~~~~~~~H~~~l~~~di~-----------~p~sN~~l~~~ 302 (304)
..+|++|++..| +++++++||++++++|++ ||.||.+||+.
T Consensus 228 ~~~~~~~~~~~~~~~~pv~~l~~~g--~~~~~~~H~~~~~~~di~~la~~g~~v~~cP~sn~~lg~g 292 (408)
T PRK08418 228 KKFFEKFLKEPKPLYTPKEFLELFK--GLRTLFTHCVYASEEELEKIKSKNASITHCPFSNRLLSNK 292 (408)
T ss_pred hhhhhhhcccccccCCHHHHHHHhC--CCCeEEEecccCCHHHHHHHHHcCCcEEECHhHHHHhcCC
Confidence 125999999887 679999999999999998 99999999875
|
|
| >COG0402 SsnA Cytosine deaminase and related metal-dependent hydrolases [Nucleotide transport and metabolism / General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-39 Score=295.35 Aligned_cols=270 Identities=29% Similarity=0.481 Sum_probs=231.5
Q ss_pred ccEEEEccEEEecCCCCceeeeeeEEEeCCEEEEecCChhhhhhhcCCCceEEeCCCCEeeccccccCccchhhhhhccc
Q 022028 19 STMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIA 98 (304)
Q Consensus 19 ~~~li~~~~ii~~~~~~~~~~~~~I~I~~g~I~~i~~~~~~~~~~~~~~~~vID~~g~iv~PG~ID~H~Hl~~s~~~g~~ 98 (304)
.++++++..++..+++.. ++++++.|+||||+.|++..+.+ .+.++||++|++|+|||||+|+|++++.++|..
T Consensus 2 ~~~~i~~~~~~~~d~~~~-~~~~~~~i~~g~I~~ig~~~~~~-----~~~~~iD~~~~lv~Pgfvn~H~H~~~t~~~g~~ 75 (421)
T COG0402 2 TMLLIRGDLLLTNDPEGR-IEDGDLVIEDGKIVAIGANAEGP-----PDEEVIDAKGKLVLPGFVNAHTHLDQTLLRGLA 75 (421)
T ss_pred cceeeeCcEEeecCcccc-eeeeeEEEcCCEEEEeCCcCCCC-----CCceeecCCCCEeccCccccccchHHHHHhhhh
Confidence 457788998888755433 67899999999999999876531 357899999999999999999999999999998
Q ss_pred CCCCccccccccccCccCC-CChHHHHHHHHHHHHHHHhcCcceeecCCCC---CHHHHHHHHHHcCCeEEeecccccCC
Q 022028 99 DDVDLMTWLHDRIWPYESN-MTEEDSYISTLLCGIELIHSGVTCFAEAGGQ---HVSEMAKAVELLGLRACLVQSTMDCG 174 (304)
Q Consensus 99 ~~~~~~~~l~~~~~~~~~~-~~~e~~~~~~~~~~~~~l~~GvTtv~d~~~~---~~~~~~~~~~~~gir~~~~~~~~d~g 174 (304)
.+.++..|+.+.+|+.+.. +++++++..++.++.+++++|+|++..+... ......+++.+.|+|.+.+..+++.+
T Consensus 76 ~~~~l~~wl~~~~~~~~~~~~~~e~~~~~a~~~~~e~l~~G~t~~~~~~~~~~~~~~~~~~a~~~~g~r~~~~~~~~~~~ 155 (421)
T COG0402 76 DDLPLLEWLERYVWPREARLLTEEDLYARALLALLEMLRNGTTTARTHVDVVAESADAAFEAALEVGLRAVLGPVLQDVA 155 (421)
T ss_pred cccchHHHHHHHHhHHHhhcCCHHHHHHHHHHHHHHHHhcCccccccccchhhhhHHHHHHHHHHhCCeeEeeeccccCC
Confidence 8777999999989888777 7888999999999999999999997655432 23457889999999999999888754
Q ss_pred CCCCCCcccCChHHHHHHHHHHHHHHcCCCCCCeEEEEeeCcccCCCHHHHHHHHHHHHHhCCeeeEEecCChhhHHHHH
Q 022028 175 EGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVM 254 (304)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~e~l~~~~~~a~~~~~~~~~H~~E~~~~~~~~~ 254 (304)
++..... ..+. ++..+++++++...+ ++.++++|+++++++++.++.+.++++++|+++++|++|+..+.+.++
T Consensus 156 --~p~~~~~-~~~~-~~~~~~~~~~~~~~~--~~~~~~~p~~~~~~~~~~~~~~~~l~~~~~~~v~iH~~E~~~e~~~~~ 229 (421)
T COG0402 156 --FPDPGAE-TDEE-LEETEELLREAHGLG--RDVVGLAPHFPYTVSPELLESLDELARKYGLPVHIHLAETLDEVERVL 229 (421)
T ss_pred --CCccccc-chHH-HHHHHHHHHHHhcCC--CeeEEEecCCCCCCCHHHHHHHHHHHhcCCCceEEEecCcHHHHHHHH
Confidence 2222222 1222 677889999988753 788899999999999999999999999999999999999999999999
Q ss_pred HhcCCCCCHHHHHHHhCCCCCCeeEEEeccCCcchhc-----------ccccccccccc
Q 022028 255 DTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEVN-----------CTFGNFKYAVH 302 (304)
Q Consensus 255 ~~~g~~~~~~~~l~~~g~l~~~~~~~H~~~l~~~di~-----------~p~sN~~l~~~ 302 (304)
+.+|.+ ++++++..|+++++++++||+|+++.|+. ||.||++|++.
T Consensus 230 ~~~g~~--~~~~~~~~g~l~~~~~~~H~~~~~~~e~~~l~~~g~~v~~cP~sN~~L~sG 286 (421)
T COG0402 230 EPYGAR--PVERLDLLGLLGSHTLLAHCVHLSEEELELLAESGASVVHCPRSNLKLGSG 286 (421)
T ss_pred hhcCCC--HHHHHHHcCCCCCCeEEEEeccCCHHHHHHHhhCCCeEEECcchhccccCC
Confidence 988985 99999999999999999999999999998 99999999986
|
|
| >PRK08393 N-ethylammeline chlorohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.9e-39 Score=292.00 Aligned_cols=265 Identities=28% Similarity=0.486 Sum_probs=225.6
Q ss_pred cEEEEccEEEecCCCCceeeeeeEEEeCCEEEEecCChhhhhhhcCCCceEEeCCCCEeeccccccCccchhhhhhcccC
Q 022028 20 TMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIAD 99 (304)
Q Consensus 20 ~~li~~~~ii~~~~~~~~~~~~~I~I~~g~I~~i~~~~~~~~~~~~~~~~vID~~g~iv~PG~ID~H~Hl~~s~~~g~~~ 99 (304)
+++|+|++|++++. ....+++|.|+||+|++|++.... + +.++||+.|++|+|||||+|+|++++.+||...
T Consensus 2 ~~~i~~~~i~~~~~--~~~~~~~i~i~~g~I~~v~~~~~~----~--~~~~id~~~~~v~Pg~vd~H~H~~~~~~rg~~~ 73 (424)
T PRK08393 2 SILIKNGYVIYGEN--LKVIRADVLIEGNKIVEVKRNINK----P--ADTVIDASGSVVSPGFINAHTHSPMVLLRGLAD 73 (424)
T ss_pred eEEEECcEEEeCCC--CceecceEEEECCEEEEecCCCCC----C--CCeEEeCCCCEEccCeeeeccCcchHhhhhccC
Confidence 37899999999763 345678999999999999875421 2 457999999999999999999999999999888
Q ss_pred CCCccccccccccCccCCCChHHHHHHHHHHHHHHHhcCcceeecCCCCCHHHHHHHHHHcCCeEEeecccccCCCCCCC
Q 022028 100 DVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQHVSEMAKAVELLGLRACLVQSTMDCGEGLPA 179 (304)
Q Consensus 100 ~~~~~~~l~~~~~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~gir~~~~~~~~d~g~~~~~ 179 (304)
+.++.+|+....|+....+++++++..++.++.+++++|+||++|+. ...+...+++.+.|+|.+++....+.. .+
T Consensus 74 ~~~l~~~l~~~~~~~~~~~~~~~~~~~a~~~~~e~l~~GvTtv~d~~-~~~~~~~~a~~~~G~r~~~~~~~~~~~---~~ 149 (424)
T PRK08393 74 DVPLMEWLQNYIWPRERKLKRKDIYWGAYLGLLEMIKSGTTTFVDMY-FHMEEVAKATLEVGLRGYLSYGMVDLG---DE 149 (424)
T ss_pred CCCHHHHHHhhhccccccCCHHHHHHHHHHHHHHHHhcCceEEeccc-cCHHHHHHHHHHhCCeEEEeceEecCC---Cc
Confidence 88999999887888777799999999999999999999999999987 556788899999999998876544321 11
Q ss_pred CcccCChHHHHHHHHHHHHHHcCCCCCCeEEEEeeCcccCCCHHHHHHHHHHHHHhCCeeeEEecCChhhHHHHHHhcCC
Q 022028 180 SWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKV 259 (304)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~e~l~~~~~~a~~~~~~~~~H~~E~~~~~~~~~~~~g~ 259 (304)
. .....++...+.++.+.....+.+...++|+.+++++++++++++++|+++++++++|++|+..+.+.+.+.+|.
T Consensus 150 ~----~~~~~l~~~~~~~~~~~~~~~~~v~~~~~p~~~~~~s~~~l~~~~~~A~~~g~~v~~H~~e~~~~~~~~~~~~g~ 225 (424)
T PRK08393 150 E----KREKEIKETEKLMEFIEKLNSPRVHFVFGPHAPYTCSLALLKWVREKAREWNKLITIHLSETMDEIKQIREKYGK 225 (424)
T ss_pred c----chHHHHHHHHHHHHHHhcCCCCceEEEEeCCcCCcCCHHHHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHhCc
Confidence 1 223445556666666666556678888999999999999999999999999999999999999999999999997
Q ss_pred CCCHHHHHHHhCCCCCCeeEEEeccCCcchhc-----------ccccccccccc
Q 022028 260 DHGTVTFLDKIEFLQNNLLSAHTVWVNHTEVN-----------CTFGNFKYAVH 302 (304)
Q Consensus 260 ~~~~~~~l~~~g~l~~~~~~~H~~~l~~~di~-----------~p~sN~~l~~~ 302 (304)
+ +++++++.|+|+++++++||++++++|++ ||.||.+++..
T Consensus 226 ~--~~~~l~~~G~l~~~~~~~H~~~l~~~~l~~la~~g~~v~~~P~sn~~lg~g 277 (424)
T PRK08393 226 S--PVVLLDEIGFLNEDVIAAHGVWLSSRDIRILASAGVTVAHNPASNMKLGSG 277 (424)
T ss_pred C--HHHHHHHcCCCCCCcEEEEeecCCHHHHHHHHhcCCEEEECHHHHHhhccC
Confidence 5 99999999999999999999999999988 99999998864
|
|
| >TIGR02967 guan_deamin guanine deaminase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.4e-38 Score=285.77 Aligned_cols=260 Identities=21% Similarity=0.314 Sum_probs=214.8
Q ss_pred ceeeeeeEEEeCCEEEEecCChhhhhhhcCCCceEEeCCCCEeeccccccCccchhhhhhcccCCCCccccccccccCcc
Q 022028 36 RVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIADDVDLMTWLHDRIWPYE 115 (304)
Q Consensus 36 ~~~~~~~I~I~~g~I~~i~~~~~~~~~~~~~~~~vID~~g~iv~PG~ID~H~Hl~~s~~~g~~~~~~~~~~l~~~~~~~~ 115 (304)
+++++++|+|+||||++|++..+....++ .+.++||++|++|+|||||+|+|++++..+| ..+.++..|+....++.+
T Consensus 2 ~~~~~~~V~V~~g~I~~Vg~~~~~~~~~~-~~~~viD~~g~~v~PGlId~H~Hl~~~~~~g-~~~~~~~~~~~~~~~~~~ 79 (401)
T TIGR02967 2 EYFEDGLLVVENGRIVAVGDYAELKETLP-AGVEIDDYRGHLIMPGFIDTHIHYPQTEMIA-SYGEQLLEWLEKYTFPTE 79 (401)
T ss_pred eEEeceEEEEECCEEEEecCcchhhhccC-CCCeEEeCCCCEEecceeecccCchhhhhcc-cCCchHHHHHhhCcCccc
Confidence 45688999999999999998654322222 2468999999999999999999999988887 456678899987666665
Q ss_pred CC-CChHHHHHHHHHHHHHHHhcCcceeecCCCCC---HHHHHHHHHHcCCeEEeecccccCCCCCCCCcccCChHHHHH
Q 022028 116 SN-MTEEDSYISTLLCGIELIHSGVTCFAEAGGQH---VSEMAKAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQ 191 (304)
Q Consensus 116 ~~-~~~e~~~~~~~~~~~~~l~~GvTtv~d~~~~~---~~~~~~~~~~~gir~~~~~~~~d~g~~~~~~~~~~~~~~~~~ 191 (304)
.. .++++.+..++.++.+++++||||++|++..+ .+...+++.+.|+|.+.+...++.. .+ ..........++
T Consensus 80 ~~~~~~~~~~~~a~~~~~e~l~~GvTtv~d~~~~~~~~~~~~~~a~~~~G~R~~~~~~~~d~~--~~-~~~~~~~~~~~~ 156 (401)
T TIGR02967 80 ARFADPDHAEEVAEFFLDELLRNGTTTALVFATVHPESVDALFEAALKRGMRMIAGKVLMDRN--AP-DYLRDTAESSYD 156 (401)
T ss_pred cccCCHHHHHHHHHHHHHHHHhCCCcEEEeccccCHHHHHHHHHHHHHCCCeEEEeeeeecCC--CC-cccccCHHHHHH
Confidence 54 47888899999999999999999999987443 3467888999999998887776622 12 111223456667
Q ss_pred HHHHHHHHHcCCCCCCeEEEEeeCcccCCCHHHHHHHHHHHHHh-CCeeeEEecCChhhHHHHHHhcCCCCCHHHHHHHh
Q 022028 192 SQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREF-KTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKI 270 (304)
Q Consensus 192 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~e~l~~~~~~a~~~-~~~~~~H~~E~~~~~~~~~~~~g~~~~~~~~l~~~ 270 (304)
..+++++++.. .+.++++++|+.+++++++.++++.++|+++ |+++++|++|+..+.+.+.+.+|...++++++++.
T Consensus 157 ~~~~~i~~~~~--~g~i~~~~~~~~~~~~s~e~l~~~~~~A~~~~g~~v~~H~~e~~~~~~~~~~~~~~~~~~~~~l~~~ 234 (401)
T TIGR02967 157 ESKALIERWHG--KGRLLYAVTPRFAPTSSPEQLAAAGELAKEYPDVYVQTHLSENKDEIAWVKELFPEAKDYLDVYDHY 234 (401)
T ss_pred HHHHHHHHHhC--cCCceEEEECCcCCcCcHHHHHHHHHHHHhCCCCeeEEEECCCchHHHHHHHHcCCCCcHHHHHHHC
Confidence 78888888765 3678899999999999999999999999999 99999999999999999999998865579999999
Q ss_pred CCCCCCeeEEEeccCCcchhc-----------ccccccccccc
Q 022028 271 EFLQNNLLSAHTVWVNHTEVN-----------CTFGNFKYAVH 302 (304)
Q Consensus 271 g~l~~~~~~~H~~~l~~~di~-----------~p~sN~~l~~~ 302 (304)
|+|+++++++||+++++++++ ||.||.+++..
T Consensus 235 g~lg~~~~~~H~~~~~~~~~~~l~~~g~~v~~~P~~~~~~~~g 277 (401)
T TIGR02967 235 GLLGRRSVFAHCIHLSDEECQRLAETGAAIAHCPTSNLFLGSG 277 (401)
T ss_pred CCCCCCeEEEecccCCHHHHHHHHHcCCeEEEChHHHHHhccC
Confidence 999999999999999999987 99999988754
|
This model describes guanine deaminase, which hydrolyzes guanine to xanthine and ammonia. Xanthine can then be converted to urate by xanthine dehydrogenase, and urate subsequently degraded. In some bacteria, the guanine deaminase gene is found near the xdhABC genes for xanthine dehydrogenase. Non-homologous forms of guanine deaminase also exist, as well as distantly related forms outside the scope of this model. |
| >cd01313 Met_dep_hydrolase_E Metallo-dependent hydrolases, subgroup D is part of the superfamily of metallo-dependent hydrolases, a large group of proteins that show conservation in their 3-dimensional fold (TIM barrel) and in details of their active site | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.3e-38 Score=286.39 Aligned_cols=252 Identities=18% Similarity=0.206 Sum_probs=204.7
Q ss_pred ceeeeeeE-EEeCCEEEEecCChhhhhhhcCCCceEEeCCCCEeeccccccCccchhhhhhcccC-----CCCccccccc
Q 022028 36 RVFRNGGV-FVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIAD-----DVDLMTWLHD 109 (304)
Q Consensus 36 ~~~~~~~I-~I~~g~I~~i~~~~~~~~~~~~~~~~vID~~g~iv~PG~ID~H~Hl~~s~~~g~~~-----~~~~~~~l~~ 109 (304)
++.++++| +|+||||++|++... .++||+.|++|+|||||+|+|++++.+||..+ +.++.+|+.
T Consensus 6 ~~~~~~~i~~v~~g~I~~Vg~~~~---------~~~iD~~g~lv~PGfVn~H~Hl~~~~~rg~~~~~~~~~~~l~~w~~- 75 (418)
T cd01313 6 GWERNVRIEVDADGRIAAVNPDTA---------TEAVALLGGALLPGMPNLHSHAFQRAMAGLTEYRGSAADSFWTWRE- 75 (418)
T ss_pred ceecCeEEEEeCCCeEEEecCCCC---------CcccccCCCeeccCccccCccHHHHHhcccccccCCCCCChhhHHH-
Confidence 67889999 999999999997532 24699999999999999999999999999765 467888985
Q ss_pred cccCccCCCChHHHHHHHHHHHHHHHhcCcceeecCCCC--------------CHHHHHHHHHHcCCeEEeecccccCCC
Q 022028 110 RIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQ--------------HVSEMAKAVELLGLRACLVQSTMDCGE 175 (304)
Q Consensus 110 ~~~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~d~~~~--------------~~~~~~~~~~~~gir~~~~~~~~d~g~ 175 (304)
..++....++++++|..++.++.+++++||||++|+... ..+...+++.+.|+|.++++.+++...
T Consensus 76 ~~~~~~~~~t~e~~~~~a~~~~~e~l~~G~Ttv~d~~~~~~~~~~~~~~~~~~~~~a~~~a~~~~GiR~~~~~~~~~~~~ 155 (418)
T cd01313 76 LMYRFAARLTPEQIEAIARQLYIEMLLAGITAVGEFHYVHHDPDGTPYADPAELAQRVIAAASDAGIGITLLPVLYARAG 155 (418)
T ss_pred HHHHHHHhCCHHHHHHHHHHHHHHHHHhCCCEEEEeeeeccCCCCCccCChhhhHHHHHHHHHHhCCeEEeeeeEEeccC
Confidence 456677789999999999999999999999999986421 135678899999999998877665321
Q ss_pred CCCCC-c-----ccCChHHHHHHHHHHHHHHcCCCCCCeEEEEeeCcccCCCHHHHHHHHHHHHHhCCeeeEEecCChhh
Q 022028 176 GLPAS-W-----AVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYE 249 (304)
Q Consensus 176 ~~~~~-~-----~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~e~l~~~~~~a~~~~~~~~~H~~E~~~~ 249 (304)
..... . ......+.++..++.++.+.. .+.+..+++|+++++++++.++++.++|++ |+++++|++|+..+
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~p~~~~~~s~e~l~~~~~~a~~-g~~i~~H~~e~~~e 232 (418)
T cd01313 156 FGGPAPNPGQRRFINGYEDFLGLLEKALRAVKE--HAAARIGVAPHSLRAVPAEQLAALAALASE-KAPVHIHLAEQPKE 232 (418)
T ss_pred CCCCCCchhhhhhcccHHHHHHHHHHHhhhhcc--CCceEEEEccCCCCCCCHHHHHHHHHHHhc-CCceEEEeCCCHHH
Confidence 11111 0 011123333444444444432 367889999999999999999999999999 99999999999999
Q ss_pred HHHHHHhcCCCCCHHHHHHHhCCCCCCeeEEEeccCCcchhc-----------ccccccccccc
Q 022028 250 NQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEVN-----------CTFGNFKYAVH 302 (304)
Q Consensus 250 ~~~~~~~~g~~~~~~~~l~~~g~l~~~~~~~H~~~l~~~di~-----------~p~sN~~l~~~ 302 (304)
.+.+++.+|.+ +++++++.|+++++++++||++++++|++ ||.||+++++.
T Consensus 233 ~~~~~~~~g~~--~i~~l~~~g~l~~~~~~~H~~~l~~~~~~~la~~g~~v~~~P~sn~~lg~g 294 (418)
T cd01313 233 VDDCLAAHGRR--PVELLLDHGHLDARWCLVHATHLTDNETLLLGRSGAVVGLCPTTEANLGDG 294 (418)
T ss_pred HHHHHHHcCCC--HHHHHHHcCCCCCCEEEEeCCCCCHHHHHHHHHcCCEEEECCCchhhccCC
Confidence 99999999985 99999999999999999999999999987 99999999864
|
The vast majority of the members have a conserved metal binding site, involving four histidines and one aspartic acid residue. In the common reaction mechanism, the metal ion (or ions) deprotonate a water molecule for a nucleophilic attack on the substrate. The function of this subgroup is unknown. |
| >cd01312 Met_dep_hydrolase_D Metallo-dependent hydrolases, subgroup D is part of the superfamily of metallo-dependent hydrolases, a large group of proteins that show conservation in their 3-dimensional fold (TIM barrel) and in details of their active site | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.5e-38 Score=281.81 Aligned_cols=240 Identities=16% Similarity=0.201 Sum_probs=196.4
Q ss_pred CEEEEecCChhhhhhhcCCCceEEeCCCCEeeccccccCccchhhhhhcccCCCCccccccccccCccCCCChHHHHHHH
Q 022028 48 DRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIADDVDLMTWLHDRIWPYESNMTEEDSYIST 127 (304)
Q Consensus 48 g~I~~i~~~~~~~~~~~~~~~~vID~~g~iv~PG~ID~H~Hl~~s~~~g~~~~~~~~~~l~~~~~~~~~~~~~e~~~~~~ 127 (304)
|+|++||+..+....++ +.+++|+.|++|+|||||+|+|+.++.+|+..++.++.+|+...+ +....+++++.|..+
T Consensus 1 ~~I~aVG~~~~~~~~~~--~~~v~d~~g~~v~PGlVnaH~H~~~~~~rg~~~~~~~~~wl~~~~-~~~~~~~~e~~~~~a 77 (381)
T cd01312 1 DKILEVGDYEKLEKRYP--GAKHEFFPNGVLLPGLINAHTHLEFSANVAQFTYGRFRAWLLSVI-NSRDELLKQPWEEAI 77 (381)
T ss_pred CeEEEECChHHHHhhcC--CCeEEecCCcEEecCccccccccchhccccccCCCchHHHHHHHH-HHHHhcChHHHHHHH
Confidence 69999998655433333 468999999999999999999999999998777788999997643 555678899999999
Q ss_pred HHHHHHHHhcCcceeecCCCCCHHHHHHHHHHcCCeEEeecccccCCCCCCCCcccCChHHHHHHHHHHHHHHcCCCCCC
Q 022028 128 LLCGIELIHSGVTCFAEAGGQHVSEMAKAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGR 207 (304)
Q Consensus 128 ~~~~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~gir~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (304)
+.++.|++++||||+.|++. ..+ ..+++.+.|+|.+++..+++..+ ..+ .+..+...+.++++....+++
T Consensus 78 ~~~~~E~l~~G~Tt~~d~~~-~~~-~~~a~~~~GiR~~~~~~~~~~~~---~~~-----~~~~~~~~~~~~~~~~~~~~~ 147 (381)
T cd01312 78 RQGIRQMLESGTTSIGAISS-DGS-LLPALASSGLRGVFFNEVIGSNP---SAI-----DFKGETFLERFKRSKSFESQL 147 (381)
T ss_pred HHHHHHHHHhCCeEEEEecC-CHH-HHHHHHHcCCcEEEEEeeECCCC---chh-----hhhHHHHHHHHHHhhccCccc
Confidence 99999999999999999873 333 78889999999999988876331 111 111222223333332223578
Q ss_pred eEEEEeeCcccCCCHHHHHHHHHHHHHhCCeeeEEecCChhhHHHHHHhc------------------CCCCCHHHHHHH
Q 022028 208 IRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTR------------------KVDHGTVTFLDK 269 (304)
Q Consensus 208 i~~~~~~~~~~~~~~e~l~~~~~~a~~~~~~~~~H~~E~~~~~~~~~~~~------------------g~~~~~~~~l~~ 269 (304)
++++++|+++++++++.++.+.++|+++++++++|++|+..+.+.+++.+ |. +++++|++
T Consensus 148 v~~~~~p~a~~~~s~e~l~~~~~lA~~~g~~i~~Hl~E~~~e~~~~~~~~g~~~~~~~~~~~~~~~~~g~--~pv~~l~~ 225 (381)
T cd01312 148 FIPAISPHAPYSVHPELAQDLIDLAKKLNLPLSTHFLESKEEREWLEESKGWFKHFWESFLKLPKPKKLA--TAIDFLDM 225 (381)
T ss_pred eEEEECCCCCcccCHHHHHHHHHHHHHcCCeEEEEecCcHHHHHHHHHhccchhhHhhhhcccccccCCC--CHHHHHHH
Confidence 99999999999999999999999999999999999999999999887654 55 49999999
Q ss_pred hCCCCCCeeEEEeccCCcchhc-----------ccccccccccc
Q 022028 270 IEFLQNNLLSAHTVWVNHTEVN-----------CTFGNFKYAVH 302 (304)
Q Consensus 270 ~g~l~~~~~~~H~~~l~~~di~-----------~p~sN~~l~~~ 302 (304)
.|+|+++++++||++++++|++ ||.||.+++..
T Consensus 226 ~g~L~~~~~~~H~~~l~~~~~~~l~~~g~~v~~~P~sn~~lg~g 269 (381)
T cd01312 226 LGGLGTRVSFVHCVYANLEEAEILASRGASIALCPRSNRLLNGG 269 (381)
T ss_pred cCCCCCCcEEEECCcCCHHHHHHHHHcCCeEEECcchhhhhcCC
Confidence 9999999999999999999998 99999998753
|
The vast majority of the members have a conserved metal binding site, involving four histidines and one aspartic acid residue. In the common reaction mechanism, the metal ion (or ions) deprotonate a water molecule for a nucleophilic attack on the substrate. The function of this subgroup is unknown. |
| >PRK06151 N-ethylammeline chlorohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.9e-37 Score=284.14 Aligned_cols=273 Identities=20% Similarity=0.297 Sum_probs=216.4
Q ss_pred cEEEEccEEEecCCCC-ceeeeeeEEEeCCEEEEecCChhhhhhhcCCCceEEeCCCCEeeccccccCccchhhhhhccc
Q 022028 20 TMILHNAVIVTMDKES-RVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIA 98 (304)
Q Consensus 20 ~~li~~~~ii~~~~~~-~~~~~~~I~I~~g~I~~i~~~~~~~~~~~~~~~~vID~~g~iv~PG~ID~H~Hl~~s~~~g~~ 98 (304)
.++|+|++|++.++.. .++++++|+|+||+|++|++... ..+.++||+.|++|+|||||+|+|+.++..++..
T Consensus 2 ~~li~~~~v~~~d~~~~~~~~~~~VlVe~g~I~~Vg~~~~------~~~~~viD~~g~~vlPGlVdaH~Hl~~~~~~~~~ 75 (488)
T PRK06151 2 RTLIKARWVLGFDDGDHRLLRDGEVVFEGDRILFVGHRFD------GEVDRVIDAGNALVGPGFIDLDALSDLDTTILGL 75 (488)
T ss_pred eEEEEccEEEEEcCCCCeEEeCcEEEEECCEEEEecCCCC------CCCCeEEeCCCCEEecCEEeeecccchhhhhccc
Confidence 5789999999877643 47899999999999999998532 1135799999999999999999999764433222
Q ss_pred CCCCccccccccccCc-------cCCCChHHHHHHHHHHHHHHHhcCcceeecCCCC----------CHHHHHHHHHHcC
Q 022028 99 DDVDLMTWLHDRIWPY-------ESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQ----------HVSEMAKAVELLG 161 (304)
Q Consensus 99 ~~~~~~~~l~~~~~~~-------~~~~~~e~~~~~~~~~~~~~l~~GvTtv~d~~~~----------~~~~~~~~~~~~g 161 (304)
.+ ...|+...+|+. ...++++++|..++.++.++|++||||++|+... ..+..++++.+.|
T Consensus 76 ~~--~~~~~~~~~~~~~~~~~~~~~~~t~e~~~~~a~~~~~e~L~~GvTt~~d~~~~~~~~~~~~~~~~~~~~~a~~~~G 153 (488)
T PRK06151 76 DN--GPGWAKGRVWSRDYVEAGRREMYTPEELAFQKRYAFAQLLRNGITTAMPIASLFYRQWAETYAEFAAAAEAAGRLG 153 (488)
T ss_pred cc--chhHHhcccCchhhhhcchhhcCCHHHHHHHHHHHHHHHHhcCeeEEehhhhhhccccccccchHHHHHHHHHHcC
Confidence 11 125655444442 1358899999999999999999999999986421 2356778889999
Q ss_pred CeEEeecccccCCCCC------CCCcccCChHHHHHHHHHHHHHHcCCCCCCeEEEEeeCcccCCCHHHHHHHHHHHHHh
Q 022028 162 LRACLVQSTMDCGEGL------PASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREF 235 (304)
Q Consensus 162 ir~~~~~~~~d~g~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~e~l~~~~~~a~~~ 235 (304)
+|.++++.+++.+... .+.+......+.+++.+++++.+...+.+.+++.++|+.+++++++++++++++|+++
T Consensus 154 iR~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~~~~~g~~~i~~~~~p~~~~~~s~e~l~~~~~~A~~~ 233 (488)
T PRK06151 154 LRVYLGPAYRSGGSVLEADGSLEVVFDEARGLAGLEEAIAFIKRVDGAHNGLVRGMLAPDRIETCTVDLLRRTAAAAREL 233 (488)
T ss_pred CeEEecchhccCccccccCCCCCccccchhHHHHHHHHHHHHHHhhcccCCceEEEEcCCCCCCCCHHHHHHHHHHHHHC
Confidence 9999887665422111 1111112234556778888888877677889999999999999999999999999999
Q ss_pred CCeeeEEecCChhhHHHHHHhcCCCCCHHHHHHHhCCCCCCeeEEEeccCCc---------chhc-----------cccc
Q 022028 236 KTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNH---------TEVN-----------CTFG 295 (304)
Q Consensus 236 ~~~~~~H~~E~~~~~~~~~~~~g~~~~~~~~l~~~g~l~~~~~~~H~~~l~~---------~di~-----------~p~s 295 (304)
|+++++|++|+..+.+.+.+.+|.+ +++++++.|+++++++++||+++++ +|++ ||.+
T Consensus 234 g~~v~~H~~e~~~~~~~~~~~~g~~--~~~~~~~~g~l~~r~~l~H~~~l~~~~~~~~~~~~~~~~la~~g~~v~~~P~~ 311 (488)
T PRK06151 234 GCPVRLHCAQGVLEVETVRRLHGTT--PLEWLADVGLLGPRLLIPHATYISGSPRLNYSGGDDLALLAEHGVSIVHCPLV 311 (488)
T ss_pred CCcEEEEECCchHHHHHHHHHcCCC--HHHHHHHcCCCCCCcEEEEEEEcCCccccccCCHHHHHHHHhcCCEEEECchh
Confidence 9999999999999999999999975 9999999999999999999999999 8887 8999
Q ss_pred ccccccc
Q 022028 296 NFKYAVH 302 (304)
Q Consensus 296 N~~l~~~ 302 (304)
|.+++..
T Consensus 312 ~~~~g~~ 318 (488)
T PRK06151 312 SARHGSA 318 (488)
T ss_pred hhhhccc
Confidence 9887753
|
|
| >TIGR02022 hutF formiminoglutamate deiminase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-37 Score=287.12 Aligned_cols=265 Identities=17% Similarity=0.174 Sum_probs=208.6
Q ss_pred ccEEEEccEEEecCCCCceeeeeeEEEe-CCEEEEecCChhhhhhhcCCCceEEeCCCCEeeccccccCccchhhhhhcc
Q 022028 19 STMILHNAVIVTMDKESRVFRNGGVFVV-QDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGI 97 (304)
Q Consensus 19 ~~~li~~~~ii~~~~~~~~~~~~~I~I~-~g~I~~i~~~~~~~~~~~~~~~~vID~~g~iv~PG~ID~H~Hl~~s~~~g~ 97 (304)
+.+.++|+++- + ++.++++|+|+ ||||++|++.... + ... +..|++|+|||||+|+|++++.+||.
T Consensus 2 ~~~~~~~~~~~--~---~~~~~~~i~I~~~g~I~~vg~~~~~----~-~~~---~~~g~lvlPGfVn~H~H~~~~~~rg~ 68 (455)
T TIGR02022 2 TVYWAERALLP--D---GWAEGVRIAVAADGRILAIETGVPA----A-PGA---ERLSGPLLPGLANLHSHAFQRAMAGL 68 (455)
T ss_pred cchhHHhccCC--C---ccccCceEEEecCCEEEEecCCCCc----c-ccc---ccCCCEEccCCcccCcchhhHhhcCC
Confidence 34567788773 2 36678899999 9999999985431 1 122 23588999999999999999999997
Q ss_pred cC-----CCCccccccccccCccCCCChHHHHHHHHHHHHHHHhcCcceeecCCCC--------------CHHHHHHHHH
Q 022028 98 AD-----DVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQ--------------HVSEMAKAVE 158 (304)
Q Consensus 98 ~~-----~~~~~~~l~~~~~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~d~~~~--------------~~~~~~~~~~ 158 (304)
.. +.++++|+. .+|+....++++++|..++.++.+++++||||++|+... ..+.++++++
T Consensus 69 ~~~~~~~~~~l~~w~~-~~~~~~~~~t~e~~~~~a~~~~~e~l~~G~Ttv~d~~~~~~~~~~~~~~~~~~~~~a~~~a~~ 147 (455)
T TIGR02022 69 AEVAGSGGDSFWTWRE-LMYRFVDRLTPEQLQAIARQLYVEMLEAGFTRVGEFHYLHHAPDGTPYADPAEMAERIAAAAA 147 (455)
T ss_pred cccccCCCCCHHHHHH-HHHHHHHhCCHHHHHHHHHHHHHHHHHhCCCEEEeeeeecccCCCccccchhhhHHHHHHHHH
Confidence 64 247888975 567777789999999999999999999999999986421 1467889999
Q ss_pred HcCCeEEeecccccCCC--CCCCCc----ccCChHHHHHHHHHHHHHHcCCCCCCeEEEEeeCcccCCCHHHHHHHHHHH
Q 022028 159 LLGLRACLVQSTMDCGE--GLPASW----AVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMA 232 (304)
Q Consensus 159 ~~gir~~~~~~~~d~g~--~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~e~l~~~~~~a 232 (304)
+.|+|..+++.+++... +.++.. .....++..+..+++.+.+.. .+.+.+.++|+++++++++.++++++ +
T Consensus 148 e~G~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~p~~~~~~s~e~l~~~~~-a 224 (455)
T TIGR02022 148 DAGIGLTLLPVFYAHSGFGGAAPNPGQRRFIHDVERFARLVEVLRRELAA--QPAAVLGLAPHSLRAVTPEQLAAVLQ-A 224 (455)
T ss_pred HhCCeEEeeeeeeecCCCCCCCCcccchhhccCHHHHHHHHHHHHHHhcc--CCceEEEEecCCCCcCCHHHHHHHHH-H
Confidence 99999988876654321 122210 111233344444444444432 35688889999999999999999999 8
Q ss_pred HHhCCeeeEEecCChhhHHHHHHhcCCCCCHHHHHHHhCCCCCCeeEEEeccCCcchhc-----------cccccccccc
Q 022028 233 REFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEVN-----------CTFGNFKYAV 301 (304)
Q Consensus 233 ~~~~~~~~~H~~E~~~~~~~~~~~~g~~~~~~~~l~~~g~l~~~~~~~H~~~l~~~di~-----------~p~sN~~l~~ 301 (304)
+++|+++++|++|+..+.+.+.+.+|.+ +++++++.|+|+++++++||++++++|++ ||.||.++++
T Consensus 225 ~~~g~~v~~H~~e~~~e~~~~~~~~G~~--~v~~l~~~g~l~~~~~~~H~~~l~~~d~~~la~~g~~v~~~P~sn~~lg~ 302 (455)
T TIGR02022 225 SDRQAPVHIHVAEQQKEVDDCLAWSGRR--PVEWLLDHGPVDARWCLVHATHLTDEETALLARSGAVAGLCPTTEANLGD 302 (455)
T ss_pred HhCCCceEEEECCChHHHHHHHHHhCCC--HHHHHHHcCCCCCCEEEEEeecCCHHHHHHHHHcCCeEEEChhhhccccC
Confidence 8999999999999999999999999985 99999999999999999999999999998 9999999986
Q ss_pred c
Q 022028 302 H 302 (304)
Q Consensus 302 ~ 302 (304)
.
T Consensus 303 g 303 (455)
T TIGR02022 303 G 303 (455)
T ss_pred C
Confidence 4
|
In some species, histidine utilization goes via urocanate to glutamate in four step, the last being removal of formamide. This model describes an alternate fourth step, formiminoglutamate hydrolase, which leads to N-formyl-L-glutamate. This product may be acted on by formylglutamate amidohydrolase (TIGR02017) and bypass glutamate as a product during its degradation. Alternatively, removal of formate (by EC 3.5.1.68) would yield glutamate. |
| >PRK09229 N-formimino-L-glutamate deiminase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.7e-37 Score=282.27 Aligned_cols=265 Identities=17% Similarity=0.189 Sum_probs=210.6
Q ss_pred cccEEEEccEEEecCCCCceeeeeeEEEeC-CEEEEecCChhhhhhhcCCCceEEeCCCCEeeccccccCccchhhhhhc
Q 022028 18 SSTMILHNAVIVTMDKESRVFRNGGVFVVQ-DRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKG 96 (304)
Q Consensus 18 ~~~~li~~~~ii~~~~~~~~~~~~~I~I~~-g~I~~i~~~~~~~~~~~~~~~~vID~~g~iv~PG~ID~H~Hl~~s~~~g 96 (304)
|.+++++++.+. + .++++++|+|+| |||++|++... + . .++..|++|+|||||+|+|+.++.+||
T Consensus 2 ~~~~~~~~~~~~--~---~~~~~~~v~i~~~grI~~vg~~~~-----~-~---~~~~~g~~vlPGlVn~H~H~~~~~~rg 67 (456)
T PRK09229 2 MTTLFAERALLP--D---GWARNVRLTVDADGRIAAVEPGAA-----P-A---GAERLAGPVLPGMPNLHSHAFQRAMAG 67 (456)
T ss_pred chhHHHHHhhCC--C---ccccCcEEEEecCCeEEEecCCCC-----C-c---cccccCcEEccCcccccccHhhHhhcC
Confidence 445566677663 3 267889999999 99999998542 1 1 234589999999999999999999999
Q ss_pred ccCC-----CCccccccccccCccCCCChHHHHHHHHHHHHHHHhcCcceeecCCCC--------------CHHHHHHHH
Q 022028 97 IADD-----VDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQ--------------HVSEMAKAV 157 (304)
Q Consensus 97 ~~~~-----~~~~~~l~~~~~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~d~~~~--------------~~~~~~~~~ 157 (304)
...+ .++.+|+. .+|+....+++++.+..++.++.++|++||||+.|+... ..+..++++
T Consensus 68 ~~~~~~~~~~~l~~w~~-~~~~~~~~~~~e~~~~~a~~~~~e~L~~G~Ttv~d~~~~~~~~~~~~~~~~~~~~~a~~~a~ 146 (456)
T PRK09229 68 LTEVRGPPQDSFWSWRE-LMYRFALRLTPDQLEAIARQLYVEMLEAGYTSVGEFHYLHHDPDGTPYADPAEMALRIVAAA 146 (456)
T ss_pred cccccCCCCCChHHHHH-HHHHHHHhCCHHHHHHHHHHHHHHHHhhCCcEEEeeeeeccCCCCCccCChHHHHHHHHHHH
Confidence 7642 56778975 457777789999999999999999999999999986421 136778999
Q ss_pred HHcCCeEEeecccccCCC--CCCCC----cccCChHHHHHHHHHHHHHHcCCCCCCeEEEEeeCcccCCCHHHHHHHHHH
Q 022028 158 ELLGLRACLVQSTMDCGE--GLPAS----WAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDM 231 (304)
Q Consensus 158 ~~~gir~~~~~~~~d~g~--~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~e~l~~~~~~ 231 (304)
.+.|+|.++++.+++... +.++. ......+..++..+++.+.+.. .++++++++|+++++++++++++++++
T Consensus 147 ~e~GiR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~p~~~~~~s~e~l~~~~~~ 224 (456)
T PRK09229 147 RAAGIGLTLLPVLYAHSGFGGQPPNPGQRRFINDPDGFLRLLEALRRALAA--LPGARLGLAPHSLRAVTPDQLAAVLAL 224 (456)
T ss_pred HHcCCEEEeceeeeecCCCCCCCCchhhcccccCHHHHHHHHHHHHHhhcC--CCceEEEEeCCCCCCCCHHHHHHHHHH
Confidence 999999998876665321 11211 0112333444444455554443 368899999999999999999999999
Q ss_pred HHHhCCeeeEEecCChhhHHHHHHhcCCCCCHHHHHHHhCCCCCCeeEEEeccCCcchhc-----------ccccccccc
Q 022028 232 AREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEVN-----------CTFGNFKYA 300 (304)
Q Consensus 232 a~~~~~~~~~H~~E~~~~~~~~~~~~g~~~~~~~~l~~~g~l~~~~~~~H~~~l~~~di~-----------~p~sN~~l~ 300 (304)
| ++|+++++|++|+..+...+++.+|.+ +++++++.|+++++++++||++++++|++ ||.||.+++
T Consensus 225 A-~~g~~i~~H~~e~~~e~~~~~~~~g~~--~~~~l~~~g~l~~~~~l~H~~~l~~~d~~~la~~g~~v~~~P~sn~~lg 301 (456)
T PRK09229 225 A-APDGPVHIHIAEQTKEVDDCLAWSGAR--PVEWLLDHAPVDARWCLVHATHLTDAETARLARSGAVAGLCPTTEANLG 301 (456)
T ss_pred h-cCCCceEEEeCCCHHHHHHHHHHcCCC--HHHHHHHcCCCCCCeEEEeeccCCHHHHHHHHHcCCeEEECchhhhhhc
Confidence 9 999999999999999999999999985 99999999999999999999999999998 999999988
Q ss_pred cc
Q 022028 301 VH 302 (304)
Q Consensus 301 ~~ 302 (304)
+.
T Consensus 302 ~g 303 (456)
T PRK09229 302 DG 303 (456)
T ss_pred CC
Confidence 64
|
|
| >PRK08204 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=9e-36 Score=274.97 Aligned_cols=266 Identities=21% Similarity=0.304 Sum_probs=217.1
Q ss_pred cccEEEEccEEEecCCCCceeeeeeEEEeCCEEEEecCChhhhhhhcCCCceEEeCCCCEeeccccccCccchhhhhhcc
Q 022028 18 SSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGI 97 (304)
Q Consensus 18 ~~~~li~~~~ii~~~~~~~~~~~~~I~I~~g~I~~i~~~~~~~~~~~~~~~~vID~~g~iv~PG~ID~H~Hl~~s~~~g~ 97 (304)
|.+++|+|++|++.++..+++++++|+|++|+|++|++..+. + +.++||++|++|+|||||+|+|+.++..++.
T Consensus 1 ~~~~li~~~~v~~~~~~~~~~~~~~v~V~~g~I~~Vg~~~~~----~--~~~viD~~g~~v~PGlId~H~H~~~~~~~~~ 74 (449)
T PRK08204 1 MKRTLIRGGTVLTMDPAIGDLPRGDILIEGDRIAAVAPSIEA----P--DAEVVDARGMIVMPGLVDTHRHTWQSVLRGI 74 (449)
T ss_pred CCcEEEECcEEEecCCCCCccccceEEEECCEEEEecCCCCC----C--CCeEEeCCCCEEecCEEeeeeccchhhhccc
Confidence 456789999999977655678899999999999999986431 1 4579999999999999999999999988888
Q ss_pred cCCCCccccccccccCccCCCChHHHHHHHHHHHHHHHhcCcceeecCCCC-----CHHHHHHHHHHcCCeEEeeccccc
Q 022028 98 ADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQ-----HVSEMAKAVELLGLRACLVQSTMD 172 (304)
Q Consensus 98 ~~~~~~~~~l~~~~~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~d~~~~-----~~~~~~~~~~~~gir~~~~~~~~d 172 (304)
..+.++.+|+....++....+++++.+..++.++.++|++||||+++++.. .....++++.+.|+|.+++....+
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~L~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~G~r~~~~~~~~~ 154 (449)
T PRK08204 75 GADWTLQTYFREIHGNLGPMFRPEDVYIANLLGALEALDAGVTTLLDWSHINNSPEHADAAIRGLAEAGIRAVFAHGSPG 154 (449)
T ss_pred cCCCcHHHHHHhhcccccccCCHHHHHHHHHHHHHHHHhcCCeEEeecccccCChhHHHHHHHHHHHcCCeEEEEccccC
Confidence 777788889887767777889999999999999999999999999986532 345678888999999988776655
Q ss_pred CCCCCCCCcccCChHHHHHHHHHHHHHHcCCCCCCeEEEEeeCcccCCCHHHHHHHHHHHHHhCCeeeEEecCChhhHHH
Q 022028 173 CGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQV 252 (304)
Q Consensus 173 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~e~l~~~~~~a~~~~~~~~~H~~E~~~~~~~ 252 (304)
.++ .+......+.++..+++++++....++.+...++++++..++++.+++++++|+++|+++++|+.|+...
T Consensus 155 ~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~~A~~~g~~v~~H~~e~~~~--- 227 (449)
T PRK08204 155 PSP----YWPFDSVPHPREDIRRVKKRYFSSDDGLLTLGLAIRGPEFSSWEVARADFRLARELGLPISMHQGFGPWG--- 227 (449)
T ss_pred CCC----CCCcchhhhhHHHHHHHHHhhccCCCCceEEEEecCCcccCCHHHHHHHHHHHHHcCCcEEEEEcCCCcc---
Confidence 432 2222233455566667777776655566777888888888899999999999999999999999988653
Q ss_pred HHHhcCCCCCHHHHHHHhCCCCCCeeEEEeccCCcchhc-----------ccccccccccc
Q 022028 253 VMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEVN-----------CTFGNFKYAVH 302 (304)
Q Consensus 253 ~~~~~g~~~~~~~~l~~~g~l~~~~~~~H~~~l~~~di~-----------~p~sN~~l~~~ 302 (304)
.+. .+++++.+.|+++++++++||++++++|++ ||.+|.+++.+
T Consensus 228 ----~~~--~~~~~l~~~g~~~~~~~i~H~~~~~~~~~~~la~~g~~v~~~P~~~~~~g~~ 282 (449)
T PRK08204 228 ----ATP--RGVEQLHDAGLLGPDLNLVHGNDLSDDELKLLADSGGSFSVTPEIEMMMGHG 282 (449)
T ss_pred ----cCC--CHHHHHHHCCCCCCCeEEEecCCCCHHHHHHHHHcCCCEEEChHHHhhhcCC
Confidence 122 389999999999999999999999999998 99999887753
|
|
| >cd01298 ATZ_TRZ_like TRZ/ATZ family contains enzymes from the atrazine degradation pathway and related hydrolases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-35 Score=270.14 Aligned_cols=270 Identities=36% Similarity=0.595 Sum_probs=222.7
Q ss_pred EEEEccEEEecCCCCceeeeeeEEEeCCEEEEecCChhhhhhhcCCCceEEeCCCCEeeccccccCccchhhhhhcccCC
Q 022028 21 MILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIADD 100 (304)
Q Consensus 21 ~li~~~~ii~~~~~~~~~~~~~I~I~~g~I~~i~~~~~~~~~~~~~~~~vID~~g~iv~PG~ID~H~Hl~~s~~~g~~~~ 100 (304)
++|+|++|+++++ .+.+++++|+|+||||++|++..+.+ . +.+.++||++|++|+|||||+|+|+.++.+++...+
T Consensus 1 ~~i~~~~v~~~~~-~~~~~~~~v~i~~g~I~~ig~~~~~~--~-~~~~~viD~~g~~i~PGlid~H~Hl~~~~~~~~~~~ 76 (411)
T cd01298 1 ILIRNGTIVTTDP-RRVLEDGDVLVEDGRIVAVGPALPLP--A-YPADEVIDAKGKVVMPGLVNTHTHLAMTLLRGLADD 76 (411)
T ss_pred CeEEeeEEEEeCC-cceeecceEEEECCEEEEecCccccc--c-CCcCeEEeCCCCEEccCccccccchhhHHhhcccCC
Confidence 4789999999765 46788999999999999999865421 0 125689999999999999999999999988887666
Q ss_pred CCccccccccccCccCCCChHHHHHHHHHHHHHHHhcCcceeecCCCCCHHHHHHHHHHcCCeEEeecccccCCCCCCCC
Q 022028 101 VDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQHVSEMAKAVELLGLRACLVQSTMDCGEGLPAS 180 (304)
Q Consensus 101 ~~~~~~l~~~~~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~gir~~~~~~~~d~g~~~~~~ 180 (304)
.++.+|+....++.....++++++..++.++.+++.+||||++++.....+...+++.+.|+|..++..+++.....
T Consensus 77 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~g~r~~~~~~~~~~~~~~--- 153 (411)
T cd01298 77 LPLMEWLKDLIWPLERLLTEEDVYLGALLALAEMIRSGTTTFADMYFFYPDAVAEAAEELGIRAVLGRGIMDLGTED--- 153 (411)
T ss_pred CCHHHHHHhhhhhhhhcCCHHHHHHHHHHHHHHHHhcCccEEECccccchHHHHHHHHHhCCeEEEEcceecCCCcc---
Confidence 77899998877776667888999999999999999999999999874332566777888899988776665432211
Q ss_pred cccCChHHHHHHHHHHHHHHcCCCCCCeEEEEeeCcccCCCHHHHHHHHHHHHHhCCeeeEEecCChhhHHHHHHhcCCC
Q 022028 181 WAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVD 260 (304)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~e~l~~~~~~a~~~~~~~~~H~~E~~~~~~~~~~~~g~~ 260 (304)
.......+++..++++++...+.+.++++++++.++.++++.++++++.|+++|+++.+|+.|+....+.+.+.+|..
T Consensus 154 --~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~~e~~~~~~~~~~~~~~~ 231 (411)
T cd01298 154 --VEETEEALAEAERLIREWHGAADGRIRVALAPHAPYTCSDELLREVAELAREYGVPLHIHLAETEDEVEESLEKYGKR 231 (411)
T ss_pred --cccHHHHHHHHHHHHHHhcCCCCCceEEEEeCCCCccCCHHHHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHhCCC
Confidence 113445666777778777655567788889998888899999999999999999999999999998888888888875
Q ss_pred CCHHHHHHHhCCCCCCeeEEEeccCCcchhc-----------cccccccccc
Q 022028 261 HGTVTFLDKIEFLQNNLLSAHTVWVNHTEVN-----------CTFGNFKYAV 301 (304)
Q Consensus 261 ~~~~~~l~~~g~l~~~~~~~H~~~l~~~di~-----------~p~sN~~l~~ 301 (304)
+++++.+.|+++.++.+.||+++++++++ ||.+|.+++.
T Consensus 232 --~~~~~~~~~~~~~~~~i~H~~~l~~~~~~~l~~~gi~~~~~p~~~~~~~~ 281 (411)
T cd01298 232 --PVEYLEELGLLGPDVVLAHCVWLTDEEIELLAETGTGVAHNPASNMKLAS 281 (411)
T ss_pred --HHHHHHHcCCCCCCeEEEEecCCCHHHHHHHHHcCCeEEEChHHhhhhhh
Confidence 89999999999999999999999999887 9999987753
|
Atrazine, a chlorinated herbizide, can be catabolized by a variety of different bacteria. The first three steps of the atrazine dehalogenation pathway are catalyzed by atrazine chlorohydrolase (AtzA), hydroxyatrazine ethylaminohydrolase (AtzB), and N-isopropylammelide N-isopropylaminohydrolase (AtzC). All three enzymes belong to the superfamily of metal dependent hydrolases. AtzA and AtzB, beside other related enzymes are represented in this CD. |
| >KOG3968 consensus Atrazine chlorohydrolase/guanine deaminase [Nucleotide transport and metabolism; Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.7e-34 Score=245.35 Aligned_cols=269 Identities=23% Similarity=0.307 Sum_probs=222.0
Q ss_pred CCceeeeeeEEEeC-CEEEEecCChhhhhhh-----cCCCceEEeCCCCEeeccccccCccchhhhh-hcccCCCCcccc
Q 022028 34 ESRVFRNGGVFVVQ-DRIKAIGQSADILQQF-----SQMADQIIDLQSQILLPGFVNTHVHTSQQLA-KGIADDVDLMTW 106 (304)
Q Consensus 34 ~~~~~~~~~I~I~~-g~I~~i~~~~~~~~~~-----~~~~~~vID~~g~iv~PG~ID~H~Hl~~s~~-~g~~~~~~~~~~ 106 (304)
+..+.++..+.|.| |||+.|++......+. .-+..++++.+|.++||||||+|+|....+. .+..-+.++.+|
T Consensus 21 ~l~i~e~~sl~Vd~~GKi~~i~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~mPGfVdtH~H~a~q~~~s~~g~d~pll~w 100 (439)
T KOG3968|consen 21 ELEILEGSSLGVDDTGKIVFIGKAYFDENKLKGEGVEKENTKIKLSSGHFLMPGFVDTHIHPAHQFAMSGAGTDMPLLQW 100 (439)
T ss_pred ceEEecCcceeecCCccEEEeeccccchhhhcccccccccceeeecCCcEEecceeecccchHhhhhhhccccCcHHHHH
Confidence 46677888889976 9999999865322111 1114588999999999999999999644433 455568899999
Q ss_pred ccccccCccCCCCh-HHHHHHHHHHHHHHHhcCcceeecCCCCCH---HHHHHHHHHcCCeEEeecccccCCCCCCCCcc
Q 022028 107 LHDRIWPYESNMTE-EDSYISTLLCGIELIHSGVTCFAEAGGQHV---SEMAKAVELLGLRACLVQSTMDCGEGLPASWA 182 (304)
Q Consensus 107 l~~~~~~~~~~~~~-e~~~~~~~~~~~~~l~~GvTtv~d~~~~~~---~~~~~~~~~~gir~~~~~~~~d~g~~~~~~~~ 182 (304)
+..+.|+.+..++. |+.|..-...+.++|++|+||+..+...+. ..+++++.+.|+|+.++...++.+.. ++++.
T Consensus 101 l~~~~f~le~~~~~~e~~~q~~~~vv~~mL~~GTTt~~~f~~~~~~s~~ll~~~~~~~G~R~~igkv~m~~~~~-~~p~~ 179 (439)
T KOG3968|consen 101 LGKYTFPLEATFTNEEDARQVYQRVVKEMLRAGTTTVEYFSTLHLDSELLLARAAIRAGQRALIGKVCMDCNAH-AVPKG 179 (439)
T ss_pred hhcceeecchhhhhHHHHHHHHHHHHHHHHHcCceehhhhhccCchhHHHHHHHHHHhCCceeeeeehhccCCC-CCCcc
Confidence 99999999988887 677777788899999999999987765433 46789999999999999999987643 34444
Q ss_pred cCChHHHHHHHHHHHHHHcCCCCCCeEEEEeeCcccCCCHHHHHHHHHHHHHhCCeeeEEecCChhhHHHHHHhcCCCCC
Q 022028 183 VRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHG 262 (304)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~e~l~~~~~~a~~~~~~~~~H~~E~~~~~~~~~~~~g~~~~ 262 (304)
....+..++..++++........+.+...+.|....+|+.++++.+.++|+.+++.+++|+.|...|++.+++.|+....
T Consensus 180 ~~~~E~si~~t~~~i~~~~~~~~~~~~~~vt~~fa~~c~k~v~~~l~~lak~~~l~~q~hIsen~~EI~~~~~ff~~~~~ 259 (439)
T KOG3968|consen 180 VETTEESIESTEDLIPKLEKLKREKVNPIVTPRFAASCSKGVFEELSKLAKYHNLHIQIHISENGKEIEAVKNFFPEKLS 259 (439)
T ss_pred chhHHHHHHHHHHHHHHHHhhccCCCCCcccccccCCCcchhHHHHHHHHHhhhhhhhhhhhhcHHHHHHHHHhhhhccc
Confidence 55667888888888887777666666666677767789999999999999999999999999999999999999997656
Q ss_pred HHHHHHHhCCCCCCeeEEEeccCCcchhc-----------cccccccccccC
Q 022028 263 TVTFLDKIEFLQNNLLSAHTVWVNHTEVN-----------CTFGNFKYAVHQ 303 (304)
Q Consensus 263 ~~~~l~~~g~l~~~~~~~H~~~l~~~di~-----------~p~sN~~l~~~~ 303 (304)
+..-+++.|+|++.++++|+++|+++++. ||.||.+|++.+
T Consensus 260 y~~~yd~~~lL~~ktvlaH~~hl~d~ei~~l~k~g~svshCP~Sn~~L~sG~ 311 (439)
T KOG3968|consen 260 YTDVYDKGGLLTEKTVLAHLEHLSDEEIELLAKRGCSVSHCPTSNSILGSGI 311 (439)
T ss_pred chHHHHHhcccchHhHhhhheecCchhHHHHHhcCCceEECCcchhhhccCC
Confidence 88888899999999999999999999998 999999999875
|
|
| >PRK07213 chlorohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-32 Score=246.78 Aligned_cols=247 Identities=13% Similarity=0.187 Sum_probs=190.9
Q ss_pred EEEEccEEEecCCCCceeeeeeEEEeCCEEEEecCChhhhhhhcCCCceEEeCCCCEeeccccccCccchhhhhhcccCC
Q 022028 21 MILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIADD 100 (304)
Q Consensus 21 ~li~~~~ii~~~~~~~~~~~~~I~I~~g~I~~i~~~~~~~~~~~~~~~~vID~~g~iv~PG~ID~H~Hl~~s~~~g~~~~ 100 (304)
++|+|++|++++. ..+.+++|+|++|+|.+|++.. + +.++||+.|++| |||||+|+|+..+.+||...+
T Consensus 2 ~li~~~~v~~~~~--~~~~~~~v~i~~g~I~~i~~~~------~--~~~~id~~g~~v-PGlvd~H~H~~~~~~rg~~~~ 70 (375)
T PRK07213 2 LVYLNGNFLYGED--FEPKKGNLVIEDGIIKGFTNEV------H--EGNVIDAKGLVI-PPLINAHTHIGDSSIKDIGIG 70 (375)
T ss_pred EEEEeeEEEeCCC--CceeeeEEEEECCEEEEeccCC------C--CCeEEeCCCCEe-cceeeeccccCchhhhcCCCC
Confidence 6799999998542 3456789999999999998641 1 457999999999 999999999999999998877
Q ss_pred CCccccccc---cccCccCCCChHHHHHHHHHHHHHHHhcCcceeecCCCCC---HHHHHHHHHHcCCeEEeecccccCC
Q 022028 101 VDLMTWLHD---RIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQH---VSEMAKAVELLGLRACLVQSTMDCG 174 (304)
Q Consensus 101 ~~~~~~l~~---~~~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~d~~~~~---~~~~~~~~~~~gir~~~~~~~~d~g 174 (304)
.++.+|+.. ..+.....+++++++..++.++.+++++||||++|+.... .+.+.+++.+.|+|..+. ...
T Consensus 71 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~e~l~~G~Ttv~D~~~~~~~~~~~~~~a~~~~~~r~~~~----~~~ 146 (375)
T PRK07213 71 KSLDELVKPPNGLKHKFLNSCSDKELVEGMKEGLYDMYNNGIKAFCDFREGGIKGINLLKKASSDLPIKPIIL----GRP 146 (375)
T ss_pred CCHHHHccCCCcchHHHHhcCCHHHHHHHHHHHHHHHHHcCCeEEEEhhhcChhHHHHHHHHHHcCCCceEEe----cCC
Confidence 788888642 1112235688999999999999999999999999964222 345677778888887521 100
Q ss_pred CCCCCCcccCChHHHHHHHHHHHHHHcCCCCCCeEEEEeeCcccCCCHHHHHHHHHHHHHhCCeeeEEecCChhhHHHHH
Q 022028 175 EGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVM 254 (304)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~e~l~~~~~~a~~~~~~~~~H~~E~~~~~~~~~ 254 (304)
... ..+...+..+..++. . .+++++++..++++.+++++++|+++++++++|++|+..+.+.+.
T Consensus 147 ----~~~---~~~~~~~~~~~~~~~----~-----~g~~~~~~~~~s~~~l~~~~~~A~~~g~~v~~H~~e~~~e~~~~~ 210 (375)
T PRK07213 147 ----TEA---DENELKKEIREILKN----S-----DGIGLSGANEYSDEELKFICKECKREKKIFSIHAAEHKGSVEYSL 210 (375)
T ss_pred ----Ccc---cchhhHHHHHHHHHh----c-----ccccccccccCCHHHHHHHHHHHHHcCCEEEEeeCCchhHHHHHH
Confidence 010 011222223333321 1 135666777889999999999999999999999999999999999
Q ss_pred HhcCCCCCHHHHHHHhCCCCCCeeEEEeccCCcchhc-----------ccccccccccc
Q 022028 255 DTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEVN-----------CTFGNFKYAVH 302 (304)
Q Consensus 255 ~~~g~~~~~~~~l~~~g~l~~~~~~~H~~~l~~~di~-----------~p~sN~~l~~~ 302 (304)
+.+|.+ +++++.+.|++ ++ .++||++++++|++ ||.||.+++..
T Consensus 211 ~~~G~~--~v~~~~~~G~~-~~-~i~H~~~~~~~~i~~la~~g~~v~~~P~sn~~l~~g 265 (375)
T PRK07213 211 EKYGMT--EIERLINLGFK-PD-FIVHATHPSNDDLELLKENNIPVVVCPRANASFNVG 265 (375)
T ss_pred HHcCCC--hHHHHHhcCCC-CC-EEEECCCCCHHHHHHHHHcCCcEEECCcchhhhccC
Confidence 999985 99999999997 67 58999999999998 99999998754
|
|
| >PRK09230 cytosine deaminase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=7.2e-30 Score=232.94 Aligned_cols=246 Identities=13% Similarity=0.134 Sum_probs=176.4
Q ss_pred cccEEEEccEEEecCCCCceeeeeeEEEeCCEEEEecCChhhhhhhcCCCceEEeCCCCEeeccccccCccchhhhhhcc
Q 022028 18 SSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGI 97 (304)
Q Consensus 18 ~~~~li~~~~ii~~~~~~~~~~~~~I~I~~g~I~~i~~~~~~~~~~~~~~~~vID~~g~iv~PG~ID~H~Hl~~s~~~g~ 97 (304)
...++|+|+++++.. . ..+|.|+||+|.+|++..+.. ..+.++||++|++|+|||||+|+|+.++..++.
T Consensus 3 ~~~~li~~~~~~~~~---~---~~~i~i~~g~I~~i~~~~~~~----~~~~~~id~~g~~v~PGlid~H~H~~~~~~~~~ 72 (426)
T PRK09230 3 NALMTIKNARLPGKE---G---LWQITIEDGKISAIEPQSEAS----LEAGEVLDAEGGLAIPPFIEPHIHLDTTQTAGE 72 (426)
T ss_pred CceEEEECcEEcCCC---e---eEEEEEECCEEEEecCCCCCC----CCCCceEeCCCCEeccceeEEEEccccceecCC
Confidence 356889999998632 1 258999999999999864311 124579999999999999999999999888775
Q ss_pred c---CCCCccccccccccCccCCCChHHHHHHHHHHHHHHHhcCcceeecCCCCC------HHHHHHHHHHc------CC
Q 022028 98 A---DDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQH------VSEMAKAVELL------GL 162 (304)
Q Consensus 98 ~---~~~~~~~~l~~~~~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~d~~~~~------~~~~~~~~~~~------gi 162 (304)
. .+.++.+|+... ++....+++++++..+..++.+++++|+|++.++.... .+.+.++.++. ++
T Consensus 73 ~~~~~~~~l~~~i~~~-~~~~~~~t~ed~~~~a~~~~~e~l~~GvTtvr~~~d~~~~~~~~~~a~~~~~~~~~~~~~~~i 151 (426)
T PRK09230 73 PNWNQSGTLFEGIERW-AERKALLTHEDVKQRAWQTLKWQIANGIQHVRTHVDVSDPTLTALKAMLEVKEEVAPWVDLQI 151 (426)
T ss_pred CccCCCCCHHHHHHHH-HHHHhcCCHHHHHHHHHHHHHHHHHcCcccEEeccccCCcchhHHHHHHHHHHHhhCcceEEE
Confidence 4 456788898763 55556688999999999999999999999998765321 13334444333 33
Q ss_pred eEEeecccccCCCCCCCCcccCChHHHHHHHHHHHHHHcCCCCCCeEEEEeeCcccCC--CHHHHHHHHHHHHHhCCeee
Q 022028 163 RACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNA--TDRLLLETRDMAREFKTGIH 240 (304)
Q Consensus 163 r~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~--~~e~l~~~~~~a~~~~~~~~ 240 (304)
+++....+++. ....+.++...+ ...+. ++..|+..++. +++.++.++++|+++|++++
T Consensus 152 ~a~~~~~~~~~----------~~~~~~l~~a~~-------~~~~~--vg~~p~~~~~~~~~~e~l~~~~~~A~~~g~~~~ 212 (426)
T PRK09230 152 VAFPQEGILSY----------PNGEALLEEALR-------LGADV--VGAIPHFEFTREYGVESLHKAFALAQKYDRLID 212 (426)
T ss_pred EeccCccccCC----------ccHHHHHHHHHH-------cCCCE--EeCCCCccccchhHHHHHHHHHHHHHHhCCCcE
Confidence 43222222211 011222222222 12222 34556666554 68899999999999999999
Q ss_pred EEecCChhhHHHHHHhcCCCCCHHHHHHHhCCCCCCeeEEEeccC-------Ccchhc-----------ccccccccc
Q 022028 241 MHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWV-------NHTEVN-----------CTFGNFKYA 300 (304)
Q Consensus 241 ~H~~E~~~~~~~~~~~~g~~~~~~~~l~~~g~l~~~~~~~H~~~l-------~~~di~-----------~p~sN~~l~ 300 (304)
+|++|+.++.....+ ++++++.+.| ++++++++||+++ ++++++ ||.||++|+
T Consensus 213 ~H~~E~~~~~~~~~~------~~~~~~~~~g-l~~~v~~~H~~~l~~~~~~~~~~~~~~La~~gv~vv~cP~sn~~l~ 283 (426)
T PRK09230 213 VHCDEIDDEQSRFVE------TVAALAHREG-MGARVTASHTTAMHSYNGAYTSRLFRLLKMSGINFVANPLVNIHLQ 283 (426)
T ss_pred EEECCCCCcchHHHH------HHHHHHHHhC-CCCCEEEEecCchhcCCHHHHHHHHHHHHHcCCeEEECcchhhhhc
Confidence 999999877653333 2899999999 6999999999999 455665 999999997
|
|
| >cd01293 Bact_CD Bacterial cytosine deaminase and related metal-dependent hydrolases | Back alignment and domain information |
|---|
Probab=99.96 E-value=1e-27 Score=218.21 Aligned_cols=249 Identities=16% Similarity=0.109 Sum_probs=170.3
Q ss_pred EEEccEEEecCCCCceeeeeeEEEeCCEEEEecCChhhhhhhcCCCceEEeCCCCEeeccccccCccchhhhhhcccCCC
Q 022028 22 ILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIADDV 101 (304)
Q Consensus 22 li~~~~ii~~~~~~~~~~~~~I~I~~g~I~~i~~~~~~~~~~~~~~~~vID~~g~iv~PG~ID~H~Hl~~s~~~g~~~~~ 101 (304)
+|+|++|+++. ..+++|+|+||+|++|++..+. +.+.++||++|++|+|||||+|+|+.++.+++...+.
T Consensus 1 ~~~~~~~~~~~-----~~~~~v~I~~g~I~~Vg~~~~~-----~~~~~vID~~g~~v~PGlId~H~H~~~~~~~~~~~~~ 70 (398)
T cd01293 1 LLRNARLADGG-----TALVDIAIEDGRIAAIGPALAV-----PPDAEEVDAKGRLVLPAFVDPHIHLDKTFTGGRWPNN 70 (398)
T ss_pred CeeeeEEeCCC-----ceEEEEEEECCEEEEEecCCCC-----CCCCceEeCCCCEEccCEeeeeeccCcccccCCCCCC
Confidence 37899999841 3788999999999999986542 1356899999999999999999999988888766555
Q ss_pred Ccccccccc--ccCccCCCChHHHHHHHHHHHHHHHhcCcceeecCCCC-------CHHHHHHHHHHcCCeEEeeccccc
Q 022028 102 DLMTWLHDR--IWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQ-------HVSEMAKAVELLGLRACLVQSTMD 172 (304)
Q Consensus 102 ~~~~~l~~~--~~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~d~~~~-------~~~~~~~~~~~~gir~~~~~~~~d 172 (304)
....|+... ..+....+++++.+..++.++.+++++||||++++... ..+...++.+..+.+.........
T Consensus 71 ~~~~~~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~l~~GvTtv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (398)
T cd01293 71 SGGTLLEAIIAWEERKLLLTAEDVKERAERALELAIAHGTTAIRTHVDVDPAAGLKALEALLELREEWADLIDLQIVAFP 150 (398)
T ss_pred CccccHHHHHHHHHHHhccChHHHHHHHHHHHHHHHHcChhheeeeecccccccchHHHHHHHHHHHhhccceEEEEecc
Confidence 444554221 11223567899999999999999999999999775431 123445555555544433221111
Q ss_pred CCCCCCCCcccCChHHHHHHHHHHHHHHcCCCCCCeEEEEeeCcccCCCHHHHHHHHHHHHHhCCeeeEEecCChhhHHH
Q 022028 173 CGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQV 252 (304)
Q Consensus 173 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~e~l~~~~~~a~~~~~~~~~H~~E~~~~~~~ 252 (304)
. ..... . +..+++++.+...+...+ .++.+.....++++.++++++.|+++|+++++|+.|...+...
T Consensus 151 ~-----~~~~~--~----~~~~~~v~~~~~~g~~~~-~~~~~~~~~~~s~e~l~~~~~~A~~~g~~v~~H~~e~~~~~~~ 218 (398)
T cd01293 151 Q-----HGLLS--T----PGGEELMREALKMGADVV-GGIPPAEIDEDGEESLDTLFELAQEHGLDIDLHLDETDDPGSR 218 (398)
T ss_pred C-----ccccC--C----CCHHHHHHHHHHhCCCEE-eCCCCCcCCccHHHHHHHHHHHHHHhCCCCEEEeCCCCCcchh
Confidence 0 00110 0 123344444433322222 2233333456789999999999999999999999998766443
Q ss_pred HHHhcCCCCCHHHHHHHhCCCCCCeeEEEeccCCc---ch----hc-----------cccccccc
Q 022028 253 VMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNH---TE----VN-----------CTFGNFKY 299 (304)
Q Consensus 253 ~~~~~g~~~~~~~~l~~~g~l~~~~~~~H~~~l~~---~d----i~-----------~p~sN~~l 299 (304)
..+. +++++.+.|++ +++.+.||+++++ ++ ++ ||.+|.++
T Consensus 219 ~~~~------~~~~~~~~g~~-~~~~i~H~~~~~~~~~~~~~~~~~~l~~~g~~v~~~p~s~~~l 276 (398)
T cd01293 219 TLEE------LAEEAERRGMQ-GRVTCSHATALGSLPEAEVSRLADLLAEAGISVVSLPPINLYL 276 (398)
T ss_pred HHHH------HHHHHHHhCCC-CCEEeeecchhhcCCHHHHHHHHHHHHHcCCeEEeCCCcchhh
Confidence 3331 67888899988 7899999999974 22 33 99999876
|
Cytosine deaminases (CDs) catalyze the deamination of cytosine, producing uracil and ammonia. They play an important role in pyrimidine salvage. CDs are present in prokaryotes and fungi, but not mammalian cells. The bacterial enzymes, but not the fungal enzymes, are related to the adenosine deaminases (ADA). The bacterial enzymes are iron dependent and hexameric. |
| >PRK07572 cytosine deaminase; Validated | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.4e-26 Score=212.03 Aligned_cols=247 Identities=15% Similarity=0.126 Sum_probs=168.9
Q ss_pred cEEEEccEEEecCCCCceeeeeeEEEeCCEEEEecCChhhhhhhcCCCceEEeCCCCEeeccccccCccchhhhhhcc--
Q 022028 20 TMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGI-- 97 (304)
Q Consensus 20 ~~li~~~~ii~~~~~~~~~~~~~I~I~~g~I~~i~~~~~~~~~~~~~~~~vID~~g~iv~PG~ID~H~Hl~~s~~~g~-- 97 (304)
+++|+|+++++.. ...+|.|+||+|++|++..+ ....++||++|++|+|||||+|+|+.++..++.
T Consensus 3 ~~~i~~~~i~~~~------~~~~i~i~~g~I~~v~~~~~------~~~~~~id~~g~~~~PG~id~h~h~~~~~~~~~~~ 70 (426)
T PRK07572 3 DLIVRNANLPDGR------TGIDIGIAGGRIAAVEPGLQ------AEAAEEIDAAGRLVSPPFVDPHFHMDATLSYGLPR 70 (426)
T ss_pred cEEEECeEECCCC------eeEEEEEECCEEEEecCCCC------CCcCceEeCCCCEEcccceehhhCcchhhccCCCC
Confidence 4689999998732 25689999999999987543 124579999999999999999999998876654
Q ss_pred -cCCCCccccccccccC-ccCCCChHHHHHHHHHHHHHHHhcCcceeecCCC---CC---HHHHHHHHHHcCCeEEeec-
Q 022028 98 -ADDVDLMTWLHDRIWP-YESNMTEEDSYISTLLCGIELIHSGVTCFAEAGG---QH---VSEMAKAVELLGLRACLVQ- 168 (304)
Q Consensus 98 -~~~~~~~~~l~~~~~~-~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~d~~~---~~---~~~~~~~~~~~gir~~~~~- 168 (304)
..+.++.+|+. +++ ....+++++++.+++.++.+++++|+|+++++.. .. ...+.+.....+.+..+..
T Consensus 71 ~~~~g~l~e~l~--~~~~~~~~~t~edl~~~a~~~~~e~l~~G~Ttvrd~~d~~~~~~~~~~a~~~~~~~~~~~~~~~~~ 148 (426)
T PRK07572 71 VNASGTLLEGIA--LWGELKPLLTQEALVERALRYCDWAVARGLLAIRSHVDVCDPRLLAVEALLEVRERVAPYLDLQLV 148 (426)
T ss_pred CCCCCCHHHHHH--HHHHHHhcCCHHHHHHHHHHHHHHHHHcCcccEeeccccCCCcccHHHHHHHHHHHhhccceEEEE
Confidence 24567778873 232 2234789999999999999999999999998632 11 1222232233333322111
Q ss_pred ccccCCCCCCCCcccCChHHHHHHHHHHHHHHcCCCCCCeEEEEeeCcccCCCH--HHHHHHHHHHHHhCCeeeEEecCC
Q 022028 169 STMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATD--RLLLETRDMAREFKTGIHMHVAEI 246 (304)
Q Consensus 169 ~~~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~--e~l~~~~~~a~~~~~~~~~H~~E~ 246 (304)
.+...|. + . .....+..++.++. +.+.+ +..|+...+++. +.++.++++|+++|+++++|++|+
T Consensus 149 a~~~~g~-~----~---~~~~~~~~~~~l~~----g~d~i--Gg~p~~~~~~~~~~e~l~~~~~~A~~~g~~v~~H~~e~ 214 (426)
T PRK07572 149 AFPQDGV-L----R---SPGAVDNLERALDM----GVDVV--GGIPHFERTMADGAESVRLLCEIAAERGLRVDMHCDES 214 (426)
T ss_pred eccChhh-c----c---CccHHHHHHHHHHc----CCCEE--eCCCCCccccchHHHHHHHHHHHHHHcCCCeEEEECCC
Confidence 1111110 0 0 01122233444432 22233 223555544444 899999999999999999999999
Q ss_pred hhhHHHHHHhcCCCCCHHHHHHHhCCCCCCeeEEEeccCCcch-------hc-----------cccccccccc
Q 022028 247 PYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTE-------VN-----------CTFGNFKYAV 301 (304)
Q Consensus 247 ~~~~~~~~~~~g~~~~~~~~l~~~g~l~~~~~~~H~~~l~~~d-------i~-----------~p~sN~~l~~ 301 (304)
.++.....+. .++++.+.|+++ +++++||+++++.| ++ ||.+|++++.
T Consensus 215 ~~~~~~~~~~------~~~~~~~~G~~~-~v~~~H~~~l~~~~~~~~~~~~~~la~~g~~vv~~P~~n~~l~~ 280 (426)
T PRK07572 215 DDPLSRHIET------LAAETQRLGLQG-RVAGSHLTSMHSMDNYYVSKLIPLMAEAGVNAIANPLINITLQG 280 (426)
T ss_pred CChhHHHHHH------HHHHHHHhCCCC-CEEEEccchhhcCCHHHHHHHHHHHHHcCCeEEECchhhhhhcC
Confidence 8877665553 577888999988 89999999999855 43 9999998863
|
|
| >PRK09356 imidazolonepropionase; Validated | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.6e-26 Score=210.90 Aligned_cols=260 Identities=15% Similarity=0.197 Sum_probs=167.6
Q ss_pred CcccEEEEccEEEecCCCC----ceeeeeeEEEeCCEEEEecCChhhhhhhcCCCceEEeCCCCEeeccccccCccchhh
Q 022028 17 SSSTMILHNAVIVTMDKES----RVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQ 92 (304)
Q Consensus 17 ~~~~~li~~~~ii~~~~~~----~~~~~~~I~I~~g~I~~i~~~~~~~~~~~~~~~~vID~~g~iv~PG~ID~H~Hl~~s 92 (304)
||.+++|+|++|++++... +++++++|+|+||||.+|++..+.+. ..+.++||+.|++|+|||||+|+|++.+
T Consensus 1 ~~~~~li~~~~v~~~~~~~~~~~~~~~~~~v~i~~g~I~~vg~~~~~~~---~~~~~~iD~~g~~v~PG~id~H~Hl~~~ 77 (406)
T PRK09356 1 MMADLLWTNAQLATMDGGGMGELGIIEDGAIAIEDGKIVWVGPEADLPA---AYAAEVIDAGGKLVTPGLIDCHTHLVFG 77 (406)
T ss_pred CCceEEEECCEEEecCCCCccccccccCcEEEEECCEEEEEeCcccccc---ccCceEEECCCCEEeeceEecCCCcccC
Confidence 4566899999999876542 67889999999999999998654211 1135899999999999999999999876
Q ss_pred hhhcc-----cCCCCcccccccc--c---cCccCCCChHHHHHHHHHHHHHHHhcCcceeecCCCC--C---HHHHHHHH
Q 022028 93 LAKGI-----ADDVDLMTWLHDR--I---WPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQ--H---VSEMAKAV 157 (304)
Q Consensus 93 ~~~g~-----~~~~~~~~~l~~~--~---~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~d~~~~--~---~~~~~~~~ 157 (304)
..++. ..+.++.+|+... + +.....+++++++..++.++.+++++||||+.++... . ....+++.
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~a~~~~~~~l~~GvTtv~~~~~~~~~~~~~~~~~~~~ 157 (406)
T PRK09356 78 GNRANEFELRLQGVSYEEIAAQGGGILSTVRATRAASEEELFAQALPRLDALLAEGVTTVEIKSGYGLDLETELKMLRVA 157 (406)
T ss_pred CCcHHHHHHHHCCCcHHHHHHhcCChHHHHHHHHhCCHHHHHHHHHHHHHHHHhcCceEEEeeccCCCCHHHHHHHHHHH
Confidence 54442 1223444443321 1 1123457889999999999999999999999875421 1 11233444
Q ss_pred HHc----CCeEEeecccccCCCCCCCCcccCChHHHHHHH-HHHHHHHcCCCCCCeEEEEeeCcccCCCHHHHHHHHHHH
Q 022028 158 ELL----GLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQ-KELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMA 232 (304)
Q Consensus 158 ~~~----gir~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~i~~~~~~~~~~~~~~e~l~~~~~~a 232 (304)
... +++... .+.+ +.++++... ...+..++.. .++++.+... +.+............+++++++++++|
T Consensus 158 ~~~~~~~~i~~~~--~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~--~~~~~i~~~~~~~~~~~~~l~~~~~~A 231 (406)
T PRK09356 158 RRLGEEHPVDVVT--TFLG-AHAVPPEYK-GRPDAYIDLVCEEMLPAVAEE--GLADAVDVFCETGAFSVEQSERVLEAA 231 (406)
T ss_pred HHHhhhCCCceEe--eeee-cccCCcccc-CCHHHHHHHHHHHHhHHHHhc--CCcceEEEEecCCCCCHHHHHHHHHHH
Confidence 443 343321 1111 122333221 1223333332 2344443322 233322222333456899999999999
Q ss_pred HHhCCeeeEEecCChhhHHHHHHhcCCCCCHHHHHHHhCCCCCCeeEEEeccCCcchhc-----------cccccccccc
Q 022028 233 REFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEVN-----------CTFGNFKYAV 301 (304)
Q Consensus 233 ~~~~~~~~~H~~E~~~~~~~~~~~~g~~~~~~~~l~~~g~l~~~~~~~H~~~l~~~di~-----------~p~sN~~l~~ 301 (304)
+++|+++++|+.|.... ..+++..+.|.+ .+.||+++++++++ ||.+|.+++.
T Consensus 232 ~~~g~~v~~H~~~~~~~------------~~~~~~~~~~~~----~~~H~~~~~~~~~~~la~~g~~~~~~P~~~~~l~~ 295 (406)
T PRK09356 232 KALGLPVKIHAEQLSNL------------GGAELAAEYGAL----SADHLEYLDEAGIAAMAEAGTVAVLLPGAFYFLRE 295 (406)
T ss_pred HHCCCCEEEEEecccCC------------CHHHHHHHcCCc----EehHhhcCCHHHHHHHHHhCCEEEECccchhhcCc
Confidence 99999999999875321 145555555543 58899999999887 9999988864
|
|
| >PRK14085 imidazolonepropionase; Provisional | Back alignment and domain information |
|---|
Probab=99.94 E-value=9.4e-26 Score=203.87 Aligned_cols=253 Identities=17% Similarity=0.209 Sum_probs=162.0
Q ss_pred cEEEEc-cEEEecCCCC-----ceeeeeeEEEeCCEEEEecCChhhhhhhcCCCceEEeCCCCEeeccccccCccchhhh
Q 022028 20 TMILHN-AVIVTMDKES-----RVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQL 93 (304)
Q Consensus 20 ~~li~~-~~ii~~~~~~-----~~~~~~~I~I~~g~I~~i~~~~~~~~~~~~~~~~vID~~g~iv~PG~ID~H~Hl~~s~ 93 (304)
.++|+| ++|+++++.. .+++++.|+|+||||++|++..+. +.+.++||++|++|+|||||+|+|+.++.
T Consensus 2 ~~l~~~~~~i~~~~~~~~~~~~~~~~~~~v~i~~g~I~~Vg~~~~~-----~~~~~~iD~~g~~v~PGlId~H~Hl~~~~ 76 (382)
T PRK14085 2 STLITNIGELVTNDPELGEGPLGVLRDAAVVVEGGRVAWVGPAADA-----PAADERVDAGGRAVLPGFVDSHSHLVFAG 76 (382)
T ss_pred cEEEEcccEEEcCCCcccCCCcccccCcEEEEECCEEEEEcCCccC-----CCCCeEEeCCCCEEecCeEecCcCccccC
Confidence 467999 5999987654 688999999999999999986432 12568999999999999999999998765
Q ss_pred hhccc--CCCCccccccccc---cCccCCCChHHHHHHHHHHHHHHHhcCcceeecCCCC--CHHHHHHHHHHcCCeEEe
Q 022028 94 AKGIA--DDVDLMTWLHDRI---WPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQ--HVSEMAKAVELLGLRACL 166 (304)
Q Consensus 94 ~~g~~--~~~~~~~~l~~~~---~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~d~~~~--~~~~~~~~~~~~gir~~~ 166 (304)
.|+.. ...+...|+...+ ++....+++++++..+..++.+++++|+||+++.+.. ......+..+..+ +...
T Consensus 77 ~r~~~~~~~~~~~~~~~~~i~~~~~~~~~~t~e~~~~~a~~~~~~~l~~G~Ttv~~~~~~~~~~~~~~~~~~~~~-~~~~ 155 (382)
T PRK14085 77 DRSAEFAARMAGEPYSAGGIRTTVAATRAASDEELRANVRRLVAEALRQGTTTVETKTGYGLTVEDEARSARIAA-EFTD 155 (382)
T ss_pred ChhHHHHhhhcCCCccCCChHHHHHHHHhCCHHHHHHHHHHHHHHHHhCCceEEEcCCcCCCCHHHHHHHHHHHH-Hhhh
Confidence 55421 1111122222211 2334567899999999999999999999999987632 2333333333222 1111
Q ss_pred ecccccCCCCCCCCcccCChHHHHHHHH-HHHHHHcCCCCCCeEEEEeeCcccCCCHHHHHHHHHHHHHhCCeeeEEecC
Q 022028 167 VQSTMDCGEGLPASWAVRTTDDCIQSQK-ELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAE 245 (304)
Q Consensus 167 ~~~~~d~g~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~~~~~~~~~~~~~e~l~~~~~~a~~~~~~~~~H~~E 245 (304)
..... .+..+++.+. ...+..++... ..+.... .....+++.... ...+++.++++++.|+++|+++.+|+.+
T Consensus 156 ~~~~~-g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~-~~~~~idi~~~~---~~~~~~~l~~~~~~a~~~g~~v~~H~~~ 229 (382)
T PRK14085 156 EVTFL-GAHVVPPEYA-GDADEYVDLVCGPMLDAVA-PHARWIDVFCER---GAFDEDQSRRVLTAGRAAGLGLRVHGNQ 229 (382)
T ss_pred cceee-ccccCCcccC-CCHHHHHHHHHHHHHHHHH-HhCCeEEEEecC---CCCCHHHHHHHHHHHHHcCCCeEEEeCc
Confidence 11111 1111222211 23334443322 1111111 123445544332 2457899999999999999999999976
Q ss_pred ChhhHHHHHHhcCCCCCHHHHHHHhCCCCCCeeEEEeccCCcchhc-----------ccccccccc
Q 022028 246 IPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEVN-----------CTFGNFKYA 300 (304)
Q Consensus 246 ~~~~~~~~~~~~g~~~~~~~~l~~~g~l~~~~~~~H~~~l~~~di~-----------~p~sN~~l~ 300 (304)
.... ..++++.+.|+++ +.||+++++++++ ||.+|+.++
T Consensus 230 ~~~~------------~~v~~~~~~g~~~----i~H~~~l~~~~~~~la~~gv~~~~~P~~~~~~~ 279 (382)
T PRK14085 230 LGPG------------PGVRLAVELGAAS----VDHCTYLTDADVDALAGSGTVATLLPGAEFSTR 279 (382)
T ss_pred ccCC------------hHHHHHHHcCCCc----HHHhCCCCHHHHHHHHHcCCEEEECcHHHHhcC
Confidence 3211 1467777777753 8899999999987 888887654
|
|
| >TIGR01224 hutI imidazolonepropionase | Back alignment and domain information |
|---|
Probab=99.93 E-value=7.7e-25 Score=197.97 Aligned_cols=236 Identities=17% Similarity=0.186 Sum_probs=155.2
Q ss_pred eeeeEEEeCCEEEEecCChhhhhhhcCCCceEEeCCCCEeeccccccCccchhhhhhcc-----cCCCCcccccccc--c
Q 022028 39 RNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGI-----ADDVDLMTWLHDR--I 111 (304)
Q Consensus 39 ~~~~I~I~~g~I~~i~~~~~~~~~~~~~~~~vID~~g~iv~PG~ID~H~Hl~~s~~~g~-----~~~~~~~~~l~~~--~ 111 (304)
++++|+|+||+|++|++..+.+ .+ .+.++||++|++|+|||||+|+|++.+..|+. .++.++.+|+... +
T Consensus 2 ~~~~v~i~~g~I~~vg~~~~~~-~~--~~~~~iD~~g~~v~PGlin~H~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (377)
T TIGR01224 2 EDAVILIHGGKIVWIGQLAALP-GE--EATEIIDCGGGLVTPGLVDPHTHLVFAGDRVNEFEMKLQGASYLEILAQGGGI 78 (377)
T ss_pred CceEEEEECCEEEEEechhhCC-cc--cCCeEEeCCCCEEcccEEecccCccccCCcHHHHHHHhCCCCHHHHHHhcCCh
Confidence 5789999999999999853221 11 15689999999999999999999988766652 3466888998652 2
Q ss_pred c---CccCCCChHHHHHHHHHHHHHHHhcCcceeecCCCCC-----HHHHHHHH----HHcCCeEEeecccccCCCCCCC
Q 022028 112 W---PYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQH-----VSEMAKAV----ELLGLRACLVQSTMDCGEGLPA 179 (304)
Q Consensus 112 ~---~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~d~~~~~-----~~~~~~~~----~~~gir~~~~~~~~d~g~~~~~ 179 (304)
+ +....+++++++..++.++.+++++||||+....... .....+++ .+.|++.... +.+ ...++.
T Consensus 79 ~~~~~~~~~~~~ed~~~~a~~~~~e~l~~Gvt~ve~~~~~g~~~~~~~~~~~a~~~~~~~~~i~~~~~--~~~-~~~~~~ 155 (377)
T TIGR01224 79 LSTVRATRAASEEELLKLALFRLKSMLRSGTTTAEVKSGYGLDLETELKMLRAAKALHEEQPVDVVTT--FLG-AHAVPP 155 (377)
T ss_pred HHHHHHHHhCCHHHHHHHHHHHHHHHHHCCceEEEecccCCCCHHHHHHHHHHHHHHHhhCCCceEee--eee-cccCCc
Confidence 2 5556789999999999999999999999983321111 11233333 3455555432 111 111222
Q ss_pred CcccCChHHHHHHH-HHHHHHHcCCCCCCeEE--EEeeCcccCCCHHHHHHHHHHHHHhCCeeeEEecCChhhHHHHHHh
Q 022028 180 SWAVRTTDDCIQSQ-KELYAKHHHAADGRIRI--WFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDT 256 (304)
Q Consensus 180 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~i~~--~~~~~~~~~~~~e~l~~~~~~a~~~~~~~~~H~~E~~~~~~~~~~~ 256 (304)
.... ..++.++.. +..++++... +.+.. .++++.. .+.+.+++++++|+++|+++++|+.|....
T Consensus 156 ~~~~-~~~~~~~~~~~~~~~~~~~~--~~v~~~~~~~~~~~--~~~~~~~~~~~~A~~~g~~v~~H~~e~~~~------- 223 (377)
T TIGR01224 156 EFQG-RPDDYVDGICEELIPQVAEE--GLASFADVFCEAGV--FSVEQSRRILQAAQEAGLPVKLHAEELSNL------- 223 (377)
T ss_pred cccC-CHHHHHHHHHHHHHHHHHHh--CCCCeeEEEecCCC--cCHHHHHHHHHHHHHCCCCEEEEecCCCCC-------
Confidence 1111 122333322 2345544321 22222 2444444 357789999999999999999999885421
Q ss_pred cCCCCCHHHHHHHhCCCCCCeeEEEeccCCcchhc-----------cccccccccc
Q 022028 257 RKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEVN-----------CTFGNFKYAV 301 (304)
Q Consensus 257 ~g~~~~~~~~l~~~g~l~~~~~~~H~~~l~~~di~-----------~p~sN~~l~~ 301 (304)
..++++.+.|.+ .+.||+++++++++ ||.+|.+++.
T Consensus 224 -----~~~~~~~~~g~~----~~~H~~~~~~~~l~~la~~g~~~~~~P~~~~~l~~ 270 (377)
T TIGR01224 224 -----GGAELAAKLGAV----SADHLEHASDAGIKALAEAGTVAVLLPGTTFYLRE 270 (377)
T ss_pred -----CHHHHHHHcCCC----ccHHHhcCCHHHHHHHHhcCCEEEECchHHHhcCC
Confidence 146666666653 36799999999887 9999998764
|
This enzyme catalyzes the third step in histidine degradation. |
| >cd01305 archeal_chlorohydrolases Predicted chlorohydrolases | Back alignment and domain information |
|---|
Probab=99.91 E-value=2.2e-24 Score=185.43 Aligned_cols=185 Identities=15% Similarity=0.213 Sum_probs=140.5
Q ss_pred EeeccccccCccchhhhhhcccCCCCccccc---cccccCccCCCChHHHHHHHHHHHHHHHhcCcceeecCCCC---CH
Q 022028 77 ILLPGFVNTHVHTSQQLAKGIADDVDLMTWL---HDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQ---HV 150 (304)
Q Consensus 77 iv~PG~ID~H~Hl~~s~~~g~~~~~~~~~~l---~~~~~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~d~~~~---~~ 150 (304)
+|+|||||+|+|+.++.+||...+.++.+|+ ....|+.+..++++++|.+++.++.+++++||||++|+... ..
T Consensus 1 ~v~PG~vn~H~H~~~~~~rg~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~e~l~~GtTt~~d~~~~~~~~~ 80 (263)
T cd01305 1 ILIPALVNAHTHLGDSAIKEVGDGLPLDDLVAPPDGLKHRLLAQADDRELAEAMRKVLRDMRETGIGAFADFREGGVEGI 80 (263)
T ss_pred CccccceeccccHHHHHhhcCCCCCcHHHHhcCcccchHHHHHhCCHHHHHHHHHHHHHHHHhcCCeEEEEccCcchhHH
Confidence 5899999999999999999998888887765 33345667789999999999999999999999999998532 35
Q ss_pred HHHHHHHHHcCCeEEeecccccCCCCCCCCcccCChHHHHHHHHHHHHHHcCCCCCCeEEEEeeCcccCCCHHHHHHHHH
Q 022028 151 SEMAKAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRD 230 (304)
Q Consensus 151 ~~~~~~~~~~gir~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~e~l~~~~~ 230 (304)
+.+.++.++.|+|. ..+++. + .. ++..+ ++ .+ +...++++++++++ ++++++
T Consensus 81 ~a~~~a~~~~g~r~---~~~~~~----~-~~-----~~~~~---~~-~~--------~~~~~~~~~~~~~~---l~~~~~ 132 (263)
T cd01305 81 ELLRRALGKLPVPF---EVILGR----P-TE-----PDDPE---IL-LE--------VADGLGLSSANDVD---LEDILE 132 (263)
T ss_pred HHHHHHHHhcCCCc---eEEecc----C-Cc-----chHHH---HH-Hh--------hcccccCCCCCccC---HHHHHH
Confidence 67888999999995 222221 1 11 01111 11 11 12246677777666 899999
Q ss_pred HHHHhCCeeeEEecCChhhHHHHHHhcCCCCCHHHHHHHhCCCCCCeeEEEeccCCcchhc-----------cccccccc
Q 022028 231 MAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEVN-----------CTFGNFKY 299 (304)
Q Consensus 231 ~a~~~~~~~~~H~~E~~~~~~~~~~~~g~~~~~~~~l~~~g~l~~~~~~~H~~~l~~~di~-----------~p~sN~~l 299 (304)
+|+++|+++++|++|...+. |. ++++++.+. +++. ++||+++++++++ ||.||.++
T Consensus 133 ~A~~~g~~v~~H~~e~~~~~-------g~--~~i~~~~~~---~~~~-i~H~~~l~~~~~~~la~~g~~v~~~P~sn~~l 199 (263)
T cd01305 133 LLRRRGKLFAIHASETRESV-------GM--TDIERALDL---EPDL-LVHGTHLTDEDLELVRENGVPVVLCPRSNLYF 199 (263)
T ss_pred HHHHCCCeeEEecCCCCCCC-------Cc--hhHHHHHhC---CCCE-EEEcCCCCHHHHHHHHHcCCcEEEChhhHHHh
Confidence 99999999999999987643 32 378888776 5564 7999999999998 99999988
Q ss_pred ccc
Q 022028 300 AVH 302 (304)
Q Consensus 300 ~~~ 302 (304)
+..
T Consensus 200 ~~g 202 (263)
T cd01305 200 GVG 202 (263)
T ss_pred CCC
Confidence 753
|
These metallo-dependent hydrolases from archea are part of the superfamily of metallo-dependent hydrolases, a large group of proteins that show conservation in their 3-dimensional fold (TIM barrel) and in details of their active site. They have a conserved metal binding site, involving four histidines and one aspartic acid residue. In the common reaction mechanism, the metal ion (or ions) deprotonate a water molecule for a nucleophilic attack on the substrate. Some members of this subgroup are predicted to be chlorohyrolases. |
| >cd01296 Imidazolone-5PH Imidazolonepropionase/imidazolone-5-propionate hydrolase (Imidazolone-5PH) catalyzes the third step in the histidine degradation pathway, the hydrolysis of (S)-3-(5-oxo-4,5-dihydro-3H-imidazol-4-yl)propanoate to N-formimidoyl-L-glutamate | Back alignment and domain information |
|---|
Probab=99.90 E-value=7.8e-23 Score=184.52 Aligned_cols=236 Identities=15% Similarity=0.185 Sum_probs=148.8
Q ss_pred EEEeCCEEEEecCChhhhhhhcCCCceEEeCCCCEeeccccccCccchhhhhhcc-----cCCCCcccccccc---cc--
Q 022028 43 VFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGI-----ADDVDLMTWLHDR---IW-- 112 (304)
Q Consensus 43 I~I~~g~I~~i~~~~~~~~~~~~~~~~vID~~g~iv~PG~ID~H~Hl~~s~~~g~-----~~~~~~~~~l~~~---~~-- 112 (304)
|+|+||||++|++..+.+.. .+.+.++||++|++|+|||||+|+|++++..++. ..+..+.+|+... .+
T Consensus 1 i~i~~g~I~~ig~~~~~~~~-~~~~~~~iD~~G~~v~Pg~vn~H~Hl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (371)
T cd01296 1 IAIRDGRIAAVGPAASLPAP-GPAAAEEIDAGGRAVTPGLVDCHTHLVFAGDRVDEFAARLAGASYEEILAAGGGILSTV 79 (371)
T ss_pred CEEECCEEEEEeCchhcccc-cCCCceEEECCCCEEecceeecCCCCcCCCCcHHHHHHHHCCCCHHHHHHcCCChHHHH
Confidence 57899999999986532100 0124589999999999999999999988765542 1345677787641 22
Q ss_pred CccCCCChHHHHHHHHHHHHHHHhcCcceeecCCCC-----CHHHHHHHHHHcCCe--EEeecccccCCCCCCCCcccCC
Q 022028 113 PYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQ-----HVSEMAKAVELLGLR--ACLVQSTMDCGEGLPASWAVRT 185 (304)
Q Consensus 113 ~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~d~~~~-----~~~~~~~~~~~~gir--~~~~~~~~d~g~~~~~~~~~~~ 185 (304)
+....+++++++..++.++.+++++|||++.++... ......+++.+.+.+ ..+...+.+ +..++.... .
T Consensus 80 ~~~~~~~~~d~~~~a~~~~~~~~~~Gvt~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~-~~~~p~~~~--~ 156 (371)
T cd01296 80 RATRAASEDELFASALRRLARMLRHGTTTVEVKSGYGLDLETELKMLRVIRRLKEEGPVDLVSTFLG-AHAVPPEYK--G 156 (371)
T ss_pred HHHHhCCHHHHHHHHHHHHHHHHHCCceEEEecccCCCCHHHHHHHHHHHHHHHhhCCCceEeeeee-cccCCcccC--C
Confidence 344668899999999999999999999999873211 122345555555442 222222221 111222211 1
Q ss_pred hHHHHH-HHHHHHHHHcC-CCCCCeEEEEeeCcccCCCHHHHHHHHHHHHHhCCeeeEEecCChhhHHHHHHhcCCCCCH
Q 022028 186 TDDCIQ-SQKELYAKHHH-AADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGT 263 (304)
Q Consensus 186 ~~~~~~-~~~~~~~~~~~-~~~~~i~~~~~~~~~~~~~~e~l~~~~~~a~~~~~~~~~H~~E~~~~~~~~~~~~g~~~~~ 263 (304)
....++ ..++.++.+.. .....+++ ..... ..+++.+++++++|+++|+++.+|+.|.... ..
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~--~~~~~~~~~~~~~A~~~g~~v~~H~~e~~~~------------~~ 221 (371)
T cd01296 157 REEYIDLVIEEVLPAVAEENLADFCDV-FCEKG--AFSLEQSRRILEAAKEAGLPVKIHADELSNI------------GG 221 (371)
T ss_pred hHHHHHHHHHHHHHHHHHhCCCCEEEE-eecCC--ccCHHHHHHHHHHHHHCCCeEEEEEcCcCCC------------CH
Confidence 122222 23444444331 11122222 23322 2458899999999999999999999886421 13
Q ss_pred HHHHHHhCCCCCCeeEEEeccCCcchhc-----------cccccccccc
Q 022028 264 VTFLDKIEFLQNNLLSAHTVWVNHTEVN-----------CTFGNFKYAV 301 (304)
Q Consensus 264 ~~~l~~~g~l~~~~~~~H~~~l~~~di~-----------~p~sN~~l~~ 301 (304)
++...+.|.. .+.||+++++++++ ||.+|.+++.
T Consensus 222 ~~~~~~~g~~----~i~H~~~~~~~~i~~la~~g~~v~~~P~~~~~l~~ 266 (371)
T cd01296 222 AELAAELGAL----SADHLEHTSDEGIAALAEAGTVAVLLPGTAFSLRE 266 (371)
T ss_pred HHHHHHcCCC----eeHHhcCCCHHHHHHHHHcCCeEEEChHHHHHhCC
Confidence 4544455543 47999999998876 9999987764
|
In bacteria, the enzyme is part of histidine utilization (hut) operon. |
| >PRK05985 cytosine deaminase; Provisional | Back alignment and domain information |
|---|
Probab=99.89 E-value=2.6e-22 Score=182.20 Aligned_cols=236 Identities=15% Similarity=0.142 Sum_probs=150.9
Q ss_pred cccEEEEccEEEecCCCCceeeeeeEEEeCCEEEEecCChhhhhhhcCCCceEEeCCCCEeeccccccCccchhhhhhcc
Q 022028 18 SSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGI 97 (304)
Q Consensus 18 ~~~~li~~~~ii~~~~~~~~~~~~~I~I~~g~I~~i~~~~~~~~~~~~~~~~vID~~g~iv~PG~ID~H~Hl~~s~~~g~ 97 (304)
|++++|+|++|+++. ..+|.|+||+|++|++..+. ..+.++||++|++|+|||||+|+|+.....+..
T Consensus 1 ~~~~~i~~~~i~~~~-------~~~v~i~~g~i~~i~~~~~~-----~~~~~~id~~g~~v~Pg~iD~h~h~~~~~~~~~ 68 (391)
T PRK05985 1 MTDLLFRNVRPAGGA-------AVDILIRDGRIAAIGPALAA-----PPGAEVEDGGGALALPGLVDGHIHLDKTFWGDP 68 (391)
T ss_pred CCCEEEECcEECCCC-------eeEEEEECCEEEEecCCCCC-----CCCCcEEECCCCEEecceEeeEEccCccccCCc
Confidence 356789999999742 45899999999999986432 124579999999999999999999986543211
Q ss_pred cC----CCCccccccccccCccCCCChHHHHHHHHHHHHHHHhcCcceeecCCCC-------CHHHHHHHHHHcCCeEEe
Q 022028 98 AD----DVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQ-------HVSEMAKAVELLGLRACL 166 (304)
Q Consensus 98 ~~----~~~~~~~l~~~~~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~d~~~~-------~~~~~~~~~~~~gir~~~ 166 (304)
.. ...+.+++.... ....++.++++..+...+.+++++|+|+++++... ..+.+.++.+. .|..+
T Consensus 69 ~~~~~~~~~~~~~i~~~~--~~~~~~~~~~~~~a~~~~~~~l~~G~t~vr~~~~~~~~~~~~~~~~~~~~~~~--~~~~~ 144 (391)
T PRK05985 69 WYPNEPGPSLRERIANER--RRRAASGHPAAERALALARAAAAAGTTAMRSHVDVDPDAGLRHLEAVLAARET--LRGLI 144 (391)
T ss_pred cccCCCCCCHHHHHHHHH--HhhccchhHHHHHHHHHHHHHHhcCcceEEeeEccCCCcccchHHHHHHHHHH--hhCcc
Confidence 10 122233222110 01245667889999999999999999999876532 13345555333 33222
Q ss_pred ecccccCCCCCCCCcccCChHHHHHHHHHHHHHHcCCCCCCeEEEEeeCcccCCCHHHHHHHHHHHHHhCCeeeEEecCC
Q 022028 167 VQSTMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEI 246 (304)
Q Consensus 167 ~~~~~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~e~l~~~~~~a~~~~~~~~~H~~E~ 246 (304)
...+.+. ++......+ . ..+++++....+.+ +..++.|+.+..++++.+++++++|+++|+++++|++|+
T Consensus 145 ~~~~v~~----~~~g~~~~~-~----~~~ll~~~l~~g~~-~~gg~~p~~~~~~~~~~l~~~~~~A~~~g~~i~~Hv~e~ 214 (391)
T PRK05985 145 DIQIVAF----PQSGVLSRP-G----TAELLDAALRAGAD-VVGGLDPAGIDGDPEGQLDIVFGLAERHGVGIDIHLHEP 214 (391)
T ss_pred cEEEEec----cCccccCCc-C----HHHHHHHHHHcCCC-EEeCCCCCCcCCCHHHHHHHHHHHHHHhCCCcEEeeCCC
Confidence 2222221 111111110 0 12333333332323 445567778888999999999999999999999999998
Q ss_pred hhhHHHHHHhcCCCCCHHHHHHHhCCCCCCeeEEEeccCC
Q 022028 247 PYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVN 286 (304)
Q Consensus 247 ~~~~~~~~~~~g~~~~~~~~l~~~g~l~~~~~~~H~~~l~ 286 (304)
.+....... ..++...+.|+.+ ++.+.||+.++
T Consensus 215 ~d~~~~~~~------~~~e~~~~~g~~~-~~~i~H~~~l~ 247 (391)
T PRK05985 215 GELGAFQLE------RIAARTRALGMQG-RVAVSHAFCLG 247 (391)
T ss_pred CCccHHHHH------HHHHHHHHhCCCC-CEehhhhhhhh
Confidence 764322222 1456666777744 78999999874
|
|
| >cd01314 D-HYD D-hydantoinases (D-HYD) also called dihydropyrimidases (DHPase) and related proteins; DHPases are a family of enzymes that catalyze the reversible hydrolytic ring opening of the amide bond in five- or six-membered cyclic diamides, like dihydropyrimidine or hydantoin | Back alignment and domain information |
|---|
Probab=99.89 E-value=3.9e-22 Score=184.20 Aligned_cols=225 Identities=20% Similarity=0.219 Sum_probs=142.1
Q ss_pred EEEEccEEEecCCCCceeeeeeEEEeCCEEEEecCChhhhhhhcCCCceEEeCCCCEeeccccccCccchhhhhhcccCC
Q 022028 21 MILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIADD 100 (304)
Q Consensus 21 ~li~~~~ii~~~~~~~~~~~~~I~I~~g~I~~i~~~~~~~~~~~~~~~~vID~~g~iv~PG~ID~H~Hl~~s~~~g~~~~ 100 (304)
++|+|++|++++ . +.+++|+|+||||++|++.... ..+.++||++|++|+|||||+|+|+.....
T Consensus 1 lli~~~~v~~~~---~-~~~~~i~I~~g~I~~ig~~~~~-----~~~~~viD~~g~~vlPGlID~H~H~~~~~~------ 65 (447)
T cd01314 1 LIIKNGTIVTAD---G-SFKADILIEDGKIVAIGPNLEA-----PGGVEVIDATGKYVLPGGIDPHTHLELPFM------ 65 (447)
T ss_pred CEEECCEEECCC---C-ceeeeEEEECCEEEEeeCCCCC-----CCCceEEECCCCEEecCEEecccccccccc------
Confidence 478999999854 2 3578999999999999875321 123589999999999999999999965210
Q ss_pred CCccccccccccCccCCCChHHHHHHHHHHHHHHHhcCcceeecCCCCCH-HHHHHHHHHcCCeEEeecccccCCCCCCC
Q 022028 101 VDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQHV-SEMAKAVELLGLRACLVQSTMDCGEGLPA 179 (304)
Q Consensus 101 ~~~~~~l~~~~~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~d~~~~~~-~~~~~~~~~~gir~~~~~~~~d~g~~~~~ 179 (304)
...++++++..++. ++.+||||++|+..... ....++.+....+. ......+.+....
T Consensus 66 ---------------~~~~~e~~~~~~~~----a~~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~-~~~~~~d~~~~~~- 124 (447)
T cd01314 66 ---------------GTVTADDFESGTRA----AAAGGTTTIIDFAIPNKGQSLLEAVEKWRGKA-DGKSVIDYGFHMI- 124 (447)
T ss_pred ---------------CccCcchHHHHHHH----HHhCCCcEEEeCCCCCCCCCHHHHHHHHHHHh-cCCCcccEEEEEe-
Confidence 01235565555443 46799999999763211 22222222221111 1111222110000
Q ss_pred CcccCChHHHHHHHHHHHHHHcCCCCCCeEEEEeeCcccCCCHHHHHHHHHHHHHhCCeeeEEecCChhhHHHHHHhc--
Q 022028 180 SWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTR-- 257 (304)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~e~l~~~~~~a~~~~~~~~~H~~E~~~~~~~~~~~~-- 257 (304)
......+.+++..++++ .+...++++++++..+.++++.++++++.|+++++++++|+ |+..+.+...+++
T Consensus 125 --~~~~~~~~~~~~~~l~~----~g~~~ik~~~~~~~~~~~s~~~l~~~~~~a~~~g~~v~~H~-E~~~~~~~~~~~~~~ 197 (447)
T cd01314 125 --ITDWTDSVIEELPELVK----KGISSFKVFMAYKGLLMVDDEELLDVLKRAKELGALVMVHA-ENGDVIAELQKKLLA 197 (447)
T ss_pred --ecCCChHHHHHHHHHHH----cCCCEEEEEeccCCCCCCCHHHHHHHHHHHHhcCCeEEEEc-CCHHHHHHHHHHHHH
Confidence 00011233444444444 23356888888888888999999999999999999999995 9988877777655
Q ss_pred -CCCC-------CHHHH--------HHHhCCCCCCeeEEEeccCCcc
Q 022028 258 -KVDH-------GTVTF--------LDKIEFLQNNLLSAHTVWVNHT 288 (304)
Q Consensus 258 -g~~~-------~~~~~--------l~~~g~l~~~~~~~H~~~l~~~ 288 (304)
|... +|.+. +.-.++++.+++++|++....-
T Consensus 198 ~g~~~~~~~~~~~p~~~e~~~v~~~~~la~~~~~~~~~~H~s~~~~~ 244 (447)
T cd01314 198 QGKTGPEYHALSRPPEVEAEATARAIRLAELAGAPLYIVHVSSKEAA 244 (447)
T ss_pred cCCCChHHhhhcCCHHHHHHHHHHHHHHHHHhCCCEEEEeCCCHHHH
Confidence 6430 12211 2334567889889998876543
|
The hydrolysis of dihydropyrimidines is the second step of reductive catabolism of pyrimidines in human. The hydrolysis of 5-substituted hydantoins in microorganisms leads to enantiomerically pure N-carbamyl amino acids, which are used for the production of antibiotics, peptide hormones, pyrethroids, and pesticides. HYDs are classified depending on their stereoselectivity. This family also includes collapsin response regulators (CRMPs), cytosolic proteins involved in neuronal differentiation and axonal guidance which have strong homology to DHPases, but lack most of the active site residues. |
| >PRK06846 putative deaminase; Validated | Back alignment and domain information |
|---|
Probab=99.88 E-value=1.4e-21 Score=178.26 Aligned_cols=245 Identities=13% Similarity=0.079 Sum_probs=152.8
Q ss_pred cEEEEccEEEecCCC------CceeeeeeEEEeCCEEEEecCChhhhhhhcCCCceEEeCCCCEeeccccccCccchhhh
Q 022028 20 TMILHNAVIVTMDKE------SRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQL 93 (304)
Q Consensus 20 ~~li~~~~ii~~~~~------~~~~~~~~I~I~~g~I~~i~~~~~~~~~~~~~~~~vID~~g~iv~PG~ID~H~Hl~~s~ 93 (304)
.+.|+|+++..+... ......++|.|++|+|++|++.... +..+.++||++|++|+|||||+|+|+.+..
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~~g~I~~i~~~~~~----~~~~~~~id~~g~~v~Pg~iD~H~H~~~~~ 80 (410)
T PRK06846 5 HYWLTNVRLETGFDYENGVIVQTETALCTLEIQDGKIVAIRPNKQV----PDATLPTYDANGLLMLPAFREMHIHLDKTY 80 (410)
T ss_pred ceEEEeeecCccccccCceecCCceeeEEEEEECCEEEEeecCCCC----CCCCCceEeCCCCEEecCEEeeeecccchh
Confidence 467888877543320 1123467999999999999975321 112357999999999999999999998876
Q ss_pred hhcccC----CCCccccccccccCccCCCChHHHHHHHHHHHHHHHhcCcceeecCCCCC-------HHHHHHHHHHcCC
Q 022028 94 AKGIAD----DVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQH-------VSEMAKAVELLGL 162 (304)
Q Consensus 94 ~~g~~~----~~~~~~~l~~~~~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~d~~~~~-------~~~~~~~~~~~gi 162 (304)
.++... ...+.+|+....+... .+.+.....+...+..++..|+|+++++.... .+.+.++..+...
T Consensus 81 ~~~~~~~~~~~~g~~~~l~~~~~~~~--~~~~~~~~~a~~~l~~~~~~Gtt~~r~~v~~~~~~~~~~~~a~~e~l~e~~~ 158 (410)
T PRK06846 81 YGGPWKACRPAKTIQDRIELEQKELP--ELLPTTQERAEKLIELLQSKGATHIRSHCNIDPVIGLKNLENLQAALERYKD 158 (410)
T ss_pred hccchhhcCCcccHHHHHhhhhhhHH--HhHHHHHHHHHHHHHHHHhCCccEEEEEEeeCcccccchHHHHHHHHHHhhC
Confidence 654321 1334566643222111 11123334445566677777999987654311 1333444555333
Q ss_pred eEEeecccccCCCCCCCCcccCChHHHHHHHHHHHHHHcCCCCCCeEEEEeeCcccCCCHHHHHHHHHHHHHhCCeeeEE
Q 022028 163 RACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMH 242 (304)
Q Consensus 163 r~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~e~l~~~~~~a~~~~~~~~~H 242 (304)
+...+..... ..+. .... ..+++++....+.. +..++.|.....++++.+++++++|+++|+++++|
T Consensus 159 ~v~~~~~a~~-~~g~----~~~~-------~~~lL~~al~~Ga~-~i~gl~p~~~~~~~~~~l~~~~~lA~~~g~~v~~H 225 (410)
T PRK06846 159 GFTYEIVAFP-QHGL----LRSN-------SEPLMREAMKMGAH-LVGGVDPASVDGAIEKSLDTMFQIAVDFNKGVDIH 225 (410)
T ss_pred cceEEEEecc-Cccc----CCcc-------HHHHHHHHHHcCCC-EEeCCCCccCCcCHHHHHHHHHHHHHHhCCCcEEE
Confidence 3222111111 0010 0011 12334444333333 33356677777889999999999999999999999
Q ss_pred ecCChhhHHHHHHhcCCCCCHHHHHHHhCCCCCCeeEEEeccC---Ccchh
Q 022028 243 VAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWV---NHTEV 290 (304)
Q Consensus 243 ~~E~~~~~~~~~~~~g~~~~~~~~l~~~g~l~~~~~~~H~~~l---~~~di 290 (304)
+.|...+.....+. +++++.+.|+++ +++++||+++ +++++
T Consensus 226 v~e~~~~~~~~~~~------~~~~~~~~gl~~-~v~~~H~~~l~~~~~~e~ 269 (410)
T PRK06846 226 LHDTGPLGVATIKY------LVETTEEAQWKG-KVTISHAFALGDLNEEEV 269 (410)
T ss_pred ECCCCChhHHHHHH------HHHHHHHhCCCC-CEEEEecchhhcCCHHHH
Confidence 99988766555442 789999999887 9999999986 66664
|
|
| >PLN02942 dihydropyrimidinase | Back alignment and domain information |
|---|
Probab=99.88 E-value=7.1e-21 Score=176.80 Aligned_cols=227 Identities=17% Similarity=0.244 Sum_probs=145.9
Q ss_pred cccEEEEccEEEecCCCCceeeeeeEEEeCCEEEEecCChhhhhhhcCCCceEEeCCCCEeeccccccCccchhhhhhcc
Q 022028 18 SSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGI 97 (304)
Q Consensus 18 ~~~~li~~~~ii~~~~~~~~~~~~~I~I~~g~I~~i~~~~~~~~~~~~~~~~vID~~g~iv~PG~ID~H~Hl~~s~~~g~ 97 (304)
+++++|+|++|++.+. ...++|+|+||+|++|++..+. ..+.++||++|++|+|||||+|+|+..+.+
T Consensus 4 ~~~lli~~~~v~~~~~----~~~~~i~I~~g~I~~i~~~~~~-----~~~~~~iD~~g~~v~PG~ID~H~H~~~~~~--- 71 (486)
T PLN02942 4 STKILIKGGTVVNAHH----QELADVYVEDGIIVAVAPNLKV-----PDDVRVIDATGKFVMPGGIDPHTHLAMPFM--- 71 (486)
T ss_pred CCcEEEECcEEEcCCC----CeEeEEEEECCEEEEEcCCCCC-----CCCCeEEECCCCEEecCEeeeeeccCcccC---
Confidence 4568999999998542 2467999999999999875421 124689999999999999999999976321
Q ss_pred cCCCCccccccccccCccCCCChHHHHHHHHHHHHHHHhcCcceeecCCCC---CHHHHHHHHHHcCCeEEeecccccCC
Q 022028 98 ADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQ---HVSEMAKAVELLGLRACLVQSTMDCG 174 (304)
Q Consensus 98 ~~~~~~~~~l~~~~~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~d~~~~---~~~~~~~~~~~~gir~~~~~~~~d~g 174 (304)
.....|+++.+++ .++.+||||++|+... .....++...+...+.. .+.+
T Consensus 72 ------------------~~~~~ed~~s~s~----aAl~gGvTTv~D~~~~~~~~~~~~~~~~~~~~~~~~-----~d~~ 124 (486)
T PLN02942 72 ------------------GTETIDDFFSGQA----AALAGGTTMHIDFVIPVNGNLLAGYEAYEKKAEKSC-----MDYG 124 (486)
T ss_pred ------------------CCcccchHHHHHH----HHHcCCCeEEEeCCCCCCCCHHHHHHHHHHHHhhcC-----CCEE
Confidence 0122455555444 4699999999997521 11222222222211211 1111
Q ss_pred CCCC-CCcccCChHHHHHHHHHHHHHHcCCCCCCeEEEEeeCcccCCCHHHHHHHHHHHHHhCCeeeEEecCChhhHHHH
Q 022028 175 EGLP-ASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVV 253 (304)
Q Consensus 175 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~e~l~~~~~~a~~~~~~~~~H~~E~~~~~~~~ 253 (304)
.... ..+ ....+++..++++.+ +...+++++++++.+.++++.+.++++.+++++..+++| +|+....+.+
T Consensus 125 ~~~~~~~~----~~~~~~e~~~l~~~~---gv~~~k~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~H-aE~~~~~~~~ 196 (486)
T PLN02942 125 FHMAITKW----DDTVSRDMETLVKEK---GINSFKFFMAYKGSLMVTDELLLEGFKRCKSLGALAMVH-AENGDAVFEG 196 (486)
T ss_pred EEEEecCC----cHhHHHHHHHHHHhC---CCceEEEEEecCCCCCCCHHHHHHHHHHHHhcCCeEEEE-cCCHHHHHHH
Confidence 0000 001 112223344444433 123477777777777788999999999999999999999 8998776655
Q ss_pred HHh---cCCC-------CCH-------HHHHH-HhCCCCCCeeEEEeccCCc-chhc
Q 022028 254 MDT---RKVD-------HGT-------VTFLD-KIEFLQNNLLSAHTVWVNH-TEVN 291 (304)
Q Consensus 254 ~~~---~g~~-------~~~-------~~~l~-~~g~l~~~~~~~H~~~l~~-~di~ 291 (304)
.++ .|.. .+| ++++. -.++++.+++++|++++++ ++|.
T Consensus 197 ~~~~~~~G~~~~~~~~~~rP~~~E~~av~~~~~la~~~g~~~~i~H~s~~~~~e~i~ 253 (486)
T PLN02942 197 QKRMIELGITGPEGHALSRPPLLEGEATARAIRLAKFVNTPLYVVHVMSIDAMEEIA 253 (486)
T ss_pred HHHHHHcCCCChhhhhccCCchHHHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHHH
Confidence 543 3431 023 44444 3377888999999999998 7775
|
|
| >PRK12394 putative metallo-dependent hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=99.88 E-value=2.4e-21 Score=174.90 Aligned_cols=210 Identities=15% Similarity=0.206 Sum_probs=136.1
Q ss_pred cccEEEEccEEEecCCCCceeeeeeEEEeCCEEEEecCChhhhhhhcCCCceEEeCCCCEeeccccccCccchhhhhhcc
Q 022028 18 SSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGI 97 (304)
Q Consensus 18 ~~~~li~~~~ii~~~~~~~~~~~~~I~I~~g~I~~i~~~~~~~~~~~~~~~~vID~~g~iv~PG~ID~H~Hl~~s~~~g~ 97 (304)
+.+++|+|++|++... ....+++|+|++|+|++|++... ..+.++||++|++|+|||||+|+|+.. ++.
T Consensus 2 ~~~~li~~~~i~~~~~--~~~~~~~i~i~~g~I~~i~~~~~------~~~~~viD~~g~~v~PGliD~H~H~~~---~g~ 70 (379)
T PRK12394 2 KNDILITNGHIIDPAR--NINEINNLRIINDIIVDADKYPV------ASETRIIHADGCIVTPGLIDYHAHVFY---DGT 70 (379)
T ss_pred CccEEEECcEEECCCC--CcccccEEEEECCEEEEEcCCCC------CCCCeEEECCCCEEECCEEEeeecCCC---CCc
Confidence 3468899999997542 23456799999999999987432 124589999999999999999999953 110
Q ss_pred cCCCCccccccccccCccCCCChHHHHHHHHHHHHHHHhcCcceeecCCCCC------HHHHHHHHHHcCCeEEeecccc
Q 022028 98 ADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQH------VSEMAKAVELLGLRACLVQSTM 171 (304)
Q Consensus 98 ~~~~~~~~~l~~~~~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~d~~~~~------~~~~~~~~~~~gir~~~~~~~~ 171 (304)
. ...+++. .++++|+||++|++... ......+..+.|+|.++.....
T Consensus 71 ~-----------------~~~~~~~----------~~l~~G~Ttv~d~g~~~~~~~~~~~~~~~a~~~~gira~l~~~~~ 123 (379)
T PRK12394 71 E-----------------GGVRPDM----------YMPPNGVTTVVDAGSAGTANFDAFYRTVICASKVRIKAFLTVSPP 123 (379)
T ss_pred c-----------------cccCHHH----------HHHhCCccEEEECCCCCcccHHHHHHHHhhhhcceeeeEEeeecc
Confidence 0 0112221 27899999999986321 2222335678889998876655
Q ss_pred cCCC-CCCCCcccCChHHHHHHHHHHHHHHcCCCCCCeEEE--EeeCcccCCCHHHHHHHHHHHHHhCCeeeEEecCChh
Q 022028 172 DCGE-GLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIW--FGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPY 248 (304)
Q Consensus 172 d~g~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~--~~~~~~~~~~~e~l~~~~~~a~~~~~~~~~H~~E~~~ 248 (304)
+... +.+.... ......++.+++++.+.....+ +++. .++++ ..+++.+++..++|+++|+++++|+.|+..
T Consensus 124 ~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~g-~ki~~~~~~~~--~~~~~~l~~~~~~A~~~g~~v~iH~~e~~~ 198 (379)
T PRK12394 124 GQTWSGYQENYD--PDNIDENKIHALFRQYRNVLQG-LKLRVQTEDIA--EYGLKPLTETLRIANDLRCPVAVHSTHPVL 198 (379)
T ss_pred cccccCcccccC--hhHCCHHHHHHHHHHCcCcEEE-EEEEEeccccc--ccchHHHHHHHHHHHHcCCCEEEEeCCCCc
Confidence 3211 1111100 0011135666777766543222 2333 33333 467889999999999999999999988754
Q ss_pred hHHHHHHhcCCCCCHHHHHHHhCCCCCCeeEEEeccCC
Q 022028 249 ENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVN 286 (304)
Q Consensus 249 ~~~~~~~~~g~~~~~~~~l~~~g~l~~~~~~~H~~~l~ 286 (304)
+. .+..+++.++.++.||++.+
T Consensus 199 ~~----------------~~~~~~l~~g~~~~H~~~~~ 220 (379)
T PRK12394 199 PM----------------KELVSLLRRGDIIAHAFHGK 220 (379)
T ss_pred cH----------------HHHHHhcCCCCEEEecCCCC
Confidence 21 22355577777899999955
|
|
| >TIGR02033 D-hydantoinase D-hydantoinase | Back alignment and domain information |
|---|
Probab=99.87 E-value=2e-21 Score=179.95 Aligned_cols=225 Identities=15% Similarity=0.202 Sum_probs=138.4
Q ss_pred EEEEccEEEecCCCCceeeeeeEEEeCCEEEEecCChhhhhhhcCCCceEEeCCCCEeeccccccCccchhhhhhcccCC
Q 022028 21 MILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIADD 100 (304)
Q Consensus 21 ~li~~~~ii~~~~~~~~~~~~~I~I~~g~I~~i~~~~~~~~~~~~~~~~vID~~g~iv~PG~ID~H~Hl~~s~~~g~~~~ 100 (304)
++|+|++|++++. ..+++|+|+||||++|++.... +.+.++||++|++|+|||||+|+|+....
T Consensus 1 ~li~n~~vv~~~~----~~~~~V~I~dg~I~~Ig~~~~~-----~~~~~vIDa~G~~vlPGlID~H~H~~~~~------- 64 (454)
T TIGR02033 1 KLIRGGTVVNADD----VFQADVLIEGGKIVAVGRNLSP-----PDAVEEIDATGKYVMPGGIDVHTHLEMPF------- 64 (454)
T ss_pred CEEECcEEEcCCC----ceEEEEEEECCEEEEecCCCCC-----CCCCcEEECCCCEEecCEecceeccCccc-------
Confidence 3689999998652 2568999999999999875321 12458999999999999999999996421
Q ss_pred CCccccccccccCccCCCChHHHHHHHHHHHHHHHhcCcceeecCCCCC----HHHHHHHHHHcCCeEEeecccccCCCC
Q 022028 101 VDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQH----VSEMAKAVELLGLRACLVQSTMDCGEG 176 (304)
Q Consensus 101 ~~~~~~l~~~~~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~d~~~~~----~~~~~~~~~~~gir~~~~~~~~d~g~~ 176 (304)
....++++++..++ .++.+||||++|+.... ....++...+... +....+.+..
T Consensus 65 --------------~~~~~~e~~~~~s~----~a~~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~ 122 (454)
T TIGR02033 65 --------------GGTVTADDFFTGTK----AAAAGGTTTIIDFALPHKGESLTEALETWHEKAE----GKSVIDYGFH 122 (454)
T ss_pred --------------CCCCCcchHHHHHH----HHHhCCCCEEEeCcCCCCCCCHHHHHHHHHHHhc----cCceEEEEEE
Confidence 01234556655544 35689999999975321 1222333222211 1111111100
Q ss_pred CCCCcccCChHHHHHHHHHHHHHHcCCCCCCeEEEEeeCcccCCCHHHHHHHHHHHHHhCCeeeEEecCChhhHHHHHHh
Q 022028 177 LPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDT 256 (304)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~e~l~~~~~~a~~~~~~~~~H~~E~~~~~~~~~~~ 256 (304)
.... ....+.+++..+.+.+ .+...++++++++..+.++++.++++++.|+++++++++|. |+..+.+.+.++
T Consensus 123 ~~~~---~~~~~~~~~~~~~~~~---~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~H~-E~~~~~~~~~~~ 195 (454)
T TIGR02033 123 MMIT---HWNDEVLEEHIPELVE---EGITSFKVFMAYKNLLMVDDEELFEILKRAKELGALLQVHA-ENGDVIAELQAR 195 (454)
T ss_pred eccc---CCcHHHHHHHHHHHHh---cCCcEEEEEeecCCCCCCCHHHHHHHHHHHHhCCCeEEEEc-CCHHHHHHHHHH
Confidence 0000 0011223332333322 23456888888888888999999999999999999999995 988776655554
Q ss_pred c---CCCC-------CHH-------HH-HHHhCCCCCCeeEEEeccC-Ccchh
Q 022028 257 R---KVDH-------GTV-------TF-LDKIEFLQNNLLSAHTVWV-NHTEV 290 (304)
Q Consensus 257 ~---g~~~-------~~~-------~~-l~~~g~l~~~~~~~H~~~l-~~~di 290 (304)
+ |... +|. ++ +.-.++++.+++++|+.+- +.+++
T Consensus 196 ~~~~G~~~~~~~~~~~p~~~e~~~v~~~~~~~~~~~~~~~i~H~s~~~~~~~i 248 (454)
T TIGR02033 196 LLAQGKTGPEYHALSRPPESEAEAVARAIALAALANAPLYVVHVSTASAVDEI 248 (454)
T ss_pred HHHcCCCChhHhhhcCCHHHHHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHH
Confidence 4 5420 121 12 2223567778888888873 23444
|
This model represents the D-hydantoinase (dihydropyrimidinase) which primarily converts 5,6-dihydrouracil to 3-ureidopropanoate but also acts on dihydrothymine and hydantoin. The enzyme is a metalloenzyme. |
| >TIGR01792 urease_alph urease, alpha subunit | Back alignment and domain information |
|---|
Probab=99.86 E-value=8.8e-21 Score=174.55 Aligned_cols=189 Identities=17% Similarity=0.191 Sum_probs=132.8
Q ss_pred cccEEEEccEEEecCCCCceeeeeeEEEeCCEEEEecCChhhh--hhh---cCCCceEEeCCCCEeeccccccCccchhh
Q 022028 18 SSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADIL--QQF---SQMADQIIDLQSQILLPGFVNTHVHTSQQ 92 (304)
Q Consensus 18 ~~~~li~~~~ii~~~~~~~~~~~~~I~I~~g~I~~i~~~~~~~--~~~---~~~~~~vID~~g~iv~PG~ID~H~Hl~~s 92 (304)
..+++|+|++|++.. . +..++|.|+||||++|++..++. ... .+.+.++||++|++|+|||||+|+|+..
T Consensus 65 ~MDlVIkNg~VID~~---g-i~kaDI~IkDGrIaaIG~~~~p~~~~~v~~~~~~~tEVIDa~GkIV~PGlIDtHvH~~~- 139 (567)
T TIGR01792 65 VLDLVITNALILDWT---G-IYKADIGIKNGRIVGIGKAGNPDTMDGVDMIVGASTEAISGEGKIVTAGGIDTHVHYIS- 139 (567)
T ss_pred cCcEEEECeEEECCC---C-eEEEEEEEECCEEEEEcCCCcccccccccccCCCCCeEEECCCCEEEECeEEeecCCCC-
Confidence 345899999999732 3 45789999999999999754321 000 0125689999999999999999999722
Q ss_pred hhhcccCCCCccccccccccCccCCCChHHHHHHHHHHHHHHHhcCcceeecCCC---------------CCHHHHHHHH
Q 022028 93 LAKGIADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGG---------------QHVSEMAKAV 157 (304)
Q Consensus 93 ~~~g~~~~~~~~~~l~~~~~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~d~~~---------------~~~~~~~~~~ 157 (304)
++. ...++..|+||+.+.+. .+...+.+++
T Consensus 140 ---------------------------P~~--------~~aAl~gGVTTmI~~Gtgp~~~t~pTt~t~~~~~~~~~l~aa 184 (567)
T TIGR01792 140 ---------------------------PQQ--------VQAALDNGITTLIGGGTGPADGTNATTCTPGPWYLHRMLQAA 184 (567)
T ss_pred ---------------------------ccH--------HHHHHhCceEEEecCCCccccCCCCcccccchhhHHHHHHHh
Confidence 111 23468889999988431 1123445666
Q ss_pred HHcCCeEEeecccccCCCCCCCCcccCChHHHHHHHHHHHHHHcCCCCCCeEEEEeeCcccCCCHHHHHHHHHHHHHhCC
Q 022028 158 ELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKT 237 (304)
Q Consensus 158 ~~~gir~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~e~l~~~~~~a~~~~~ 237 (304)
+..+++..+. ..+ . . ...+...+.++ . |. .++.++..+.++++.+++++++|+++++
T Consensus 185 ~~~~in~g~~----g~g--~--~-------~~~~~L~e~i~----a--Ga--~gfK~h~~y~~s~e~L~~al~~A~e~gv 241 (567)
T TIGR01792 185 DGLPINFGFT----GKG--S--G-------SGPAALIEQIE----A--GA--CGLKVHEDWGATPAAIDNALSVADEYDV 241 (567)
T ss_pred ccCCccEEEE----eCC--c--c-------chHHHHHHHHH----c--CC--cEEEeCCCCCCCHHHHHHHHHHHHHcCC
Confidence 6677764221 111 0 0 11122223322 1 22 4567888889999999999999999999
Q ss_pred eeeEEecCChhh---HHHHHHhcCCCCCHHHHHHHhCC
Q 022028 238 GIHMHVAEIPYE---NQVVMDTRKVDHGTVTFLDKIEF 272 (304)
Q Consensus 238 ~~~~H~~E~~~~---~~~~~~~~g~~~~~~~~l~~~g~ 272 (304)
++++|+ |+..| .+.+++.+|.. +++++...|+
T Consensus 242 ~V~iH~-ET~~E~g~ve~t~~a~g~r--pIh~~H~~G~ 276 (567)
T TIGR01792 242 QVAVHT-DTLNESGFVEDTIAAFKGR--TIHTYHTEGA 276 (567)
T ss_pred EEEEeC-CCcccchHHHHHHHHHCCC--cchhHhhcCC
Confidence 999999 99999 99999999874 9999998886
|
This model describes the urease alpha subunit UreC (designated beta or B chain, UreB in Helicobacter species). Accessory proteins for incorporation of the nickel cofactor are usually found in addition to the urease alpha, beta, and gamma subunits. The trusted cutoff is set above the scores of many reported fragments and of a putative second urease alpha chain in Streptomyces coelicolor. |
| >PRK07583 cytosine deaminase-like protein; Validated | Back alignment and domain information |
|---|
Probab=99.86 E-value=4.9e-20 Score=169.39 Aligned_cols=259 Identities=16% Similarity=0.078 Sum_probs=153.6
Q ss_pred CCcccEEEEccEEEecCCCC--------ceeeeeeEEEeCCEEEEecCChhhhhhhcCCCceEEeCCCCEeeccccccCc
Q 022028 16 GSSSTMILHNAVIVTMDKES--------RVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHV 87 (304)
Q Consensus 16 ~~~~~~li~~~~ii~~~~~~--------~~~~~~~I~I~~g~I~~i~~~~~~~~~~~~~~~~vID~~g~iv~PG~ID~H~ 87 (304)
+....++|+|+++-+..... .-....+|.|+||||.+|++..+. ..+.++||++|++|+|||||+|+
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~dg~i~~i~~~~~~-----~~~~~~id~~g~~v~Pg~id~H~ 82 (438)
T PRK07583 8 PESGRYWLKNARVPAALLEGGVPPGDTLEGLVLVDIEIADGKIAAILPAGGA-----PDELPAVDLKGRMVWPCFVDMHT 82 (438)
T ss_pred CCCCcEEEeccccccccccCccCCCcCCCCcEEEEEEEECCEEEEEecCCCC-----CCCCceecCCCCcccCCccccee
Confidence 44567899999864332211 123456999999999999986531 12568999999999999999999
Q ss_pred cchhhhhhccc--CCCCccccccccccCccCCCChHHHHHHHHHHHHHHHhcCcceeecCCC---C----CHHHHHHHHH
Q 022028 88 HTSQQLAKGIA--DDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGG---Q----HVSEMAKAVE 158 (304)
Q Consensus 88 Hl~~s~~~g~~--~~~~~~~~l~~~~~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~d~~~---~----~~~~~~~~~~ 158 (304)
|+++...++.. ...++..++..........++.++++.++..++..++..|+|+++.+.. . ..+.+.+..+
T Consensus 83 Hld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~a~~~Gtt~vRt~vd~~~~~~~~~~~~i~~~~~ 162 (438)
T PRK07583 83 HLDKGHIWPRSPNPDGTFPGALDAVTADREAHWSAEDLYRRMEFGLRCAYAHGTSAIRTHLDSFAPQAAISWEVFAELRE 162 (438)
T ss_pred ccccceecCCCCCCCCCHHHHHHHHHHHhhccCCHHHHHHHHHHHHHHHHHhChhhEEeeeccCCCCcccHHHHHHHHHH
Confidence 99987655422 1223333321111011123456777888888999999999996654321 1 1222334444
Q ss_pred HcCCeEEeecccccCCCCCCCCcccCChHHHHHHHHHHHHHHcCCCCCCeEEEEeeCcccCCCHHHHHHHHHHHHHhCCe
Q 022028 159 LLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTG 238 (304)
Q Consensus 159 ~~gir~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~e~l~~~~~~a~~~~~~ 238 (304)
...-+.-..... + ++....... .. .+..+.+.+. .+.+. ++ +...+ ..++.+..++++|+++|++
T Consensus 163 ~~~~~~~~~~v~-~----~p~~~~~~~--~~-~eL~~~v~~~----~gv~g-~~-~~~~~-~~d~~l~~i~~lA~~~G~~ 227 (438)
T PRK07583 163 AWAGRIALQAVS-L----VPLDAYLTD--AG-ERLADLVAEA----GGLLG-GV-TYMNP-DLDAQLDRLFRLARERGLD 227 (438)
T ss_pred HhhccCeEEEEE-e----cChhhccCc--hH-HHHHHHHHHc----CCEEe-CC-CCCCC-CHHHHHHHHHHHHHHhCCC
Confidence 332222111000 0 011111111 11 2222233222 12222 11 11112 2567899999999999999
Q ss_pred eeEEecCChhhHHHHHHhcCCCCCHHHHHHHhCCCCCCeeEEEeccCCcc-------hhc-----------ccccccccc
Q 022028 239 IHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHT-------EVN-----------CTFGNFKYA 300 (304)
Q Consensus 239 ~~~H~~E~~~~~~~~~~~~g~~~~~~~~l~~~g~l~~~~~~~H~~~l~~~-------di~-----------~p~sN~~l~ 300 (304)
+.+|++|+.+......+. ..+++.+.|+.+ +++++||++++.. +++ ||.+|++++
T Consensus 228 v~vH~~E~~~~~~~~l~~------~~~~~~~~G~~~-~v~i~H~~~l~~~~~~~~~~~i~~la~~gv~vv~~P~~~~~l~ 300 (438)
T PRK07583 228 LDLHVDETGDPASRTLKA------VAEAALRNGFEG-KVTCGHCCSLAVQPEEQAQATIALVAEAGIAIVSLPMCNLYLQ 300 (438)
T ss_pred cEEeECCCCCchHHHHHH------HHHHHHHhCCCC-CEEEEeccchhcCCHHHHHHHHHHHHHcCCeEEECcchhhhhc
Confidence 999999887654433332 456666778754 6999999999843 333 999998875
Q ss_pred c
Q 022028 301 V 301 (304)
Q Consensus 301 ~ 301 (304)
.
T Consensus 301 ~ 301 (438)
T PRK07583 301 D 301 (438)
T ss_pred C
Confidence 3
|
|
| >PRK08323 phenylhydantoinase; Validated | Back alignment and domain information |
|---|
Probab=99.84 E-value=3.5e-20 Score=171.83 Aligned_cols=216 Identities=18% Similarity=0.208 Sum_probs=135.6
Q ss_pred cEEEEccEEEecCCCCceeeeeeEEEeCCEEEEecCChhhhhhhcCCCceEEeCCCCEeeccccccCccchhhhhhcccC
Q 022028 20 TMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIAD 99 (304)
Q Consensus 20 ~~li~~~~ii~~~~~~~~~~~~~I~I~~g~I~~i~~~~~~~~~~~~~~~~vID~~g~iv~PG~ID~H~Hl~~s~~~g~~~ 99 (304)
+++|+|++|++.+ . +.+++|+|+||||.+|++. + +.++||++|++|+|||||+|+|+.....
T Consensus 2 d~li~n~~v~~~~---~-~~~~~v~I~~g~I~~i~~~-~--------~~~viD~~g~~v~PGlID~H~H~~~~~~----- 63 (459)
T PRK08323 2 STLIKNGTVVTAD---D-TYKADVLIEDGKIAAIGAN-L--------GDEVIDATGKYVMPGGIDPHTHMEMPFG----- 63 (459)
T ss_pred cEEEECCEEEcCC---C-ceEEEEEEECCEEEEEecC-C--------CceEEECCCCEEeccEEeeeeccccccC-----
Confidence 4789999999854 2 3468999999999999864 1 3579999999999999999999954110
Q ss_pred CCCccccccccccCccCCCChHHHHHHHHHHHHHHHhcCcceeecCCCC----CHHHHHHHHHHcCCeEEeecccccCCC
Q 022028 100 DVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQ----HVSEMAKAVELLGLRACLVQSTMDCGE 175 (304)
Q Consensus 100 ~~~~~~~l~~~~~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~d~~~~----~~~~~~~~~~~~gir~~~~~~~~d~g~ 175 (304)
....+++++..++ .++.+||||++++... .....++........ ....+.+.
T Consensus 64 ----------------~~~~~e~~~~~~~----~a~~~GvTt~~d~~~~~~~~~~~~~~~~~~~~~~~----~~~~d~~~ 119 (459)
T PRK08323 64 ----------------GTVSSDDFETGTR----AAACGGTTTIIDFALQPKGQSLREALEAWHGKAAG----KAVIDYGF 119 (459)
T ss_pred ----------------CccccCcHHHHHH----HHHhCCCCEEEeCcCCCCCCChHHHHHHHHHHhcc----CceEEEEE
Confidence 0112344444333 4568999999997532 112222222221111 01111110
Q ss_pred CCCCCcccCChHHHHHHHHHHHHHHcCCCCCCeEEEEeeCcccCCCHHHHHHHHHHHHHhCCeeeEEecCChhhHHHHHH
Q 022028 176 GLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMD 255 (304)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~e~l~~~~~~a~~~~~~~~~H~~E~~~~~~~~~~ 255 (304)
..... ....+.+++..++++. +...+++++.+++.+.++++.++++++.|+++|.++++| .|+..+.+.+.+
T Consensus 120 ~~~~~---~~~~~~~~~~~~~~~~----g~~~ik~~~~~~~~~~~s~~~l~~~~~~a~~~g~~v~~H-~e~~~~~~~~~~ 191 (459)
T PRK08323 120 HMIIT---DWNEVVLDEMPELVEE----GITSFKLFMAYKGALMLDDDELLRALQRAAELGALPMVH-AENGDAIAYLQA 191 (459)
T ss_pred EEEec---CCcHHHHHHHHHHHHc----CCCEEEEEEecCCCCCCCHHHHHHHHHHHHhcCCEEEEE-cCChHHHHHHHH
Confidence 00000 0112333444444432 224578777777778899999999999999999999999 588877776665
Q ss_pred hc---CCC-------CCHHHH--------HHHhCCCCCCeeEEEeccC
Q 022028 256 TR---KVD-------HGTVTF--------LDKIEFLQNNLLSAHTVWV 285 (304)
Q Consensus 256 ~~---g~~-------~~~~~~--------l~~~g~l~~~~~~~H~~~l 285 (304)
++ |.. .+|.++ ++-.+.++.+++++|+...
T Consensus 192 ~~~~~g~~~~~~~~~~~p~~~e~~~v~~~~~~a~~~~~~~~i~H~s~~ 239 (459)
T PRK08323 192 KLLAEGKTGPEYHALSRPPEVEGEATNRAIMLAELAGAPLYIVHVSCK 239 (459)
T ss_pred HHHHcCCCChhhhhccCCHHHHHHHHHHHHHHHHHhCCCEEEEeCCCH
Confidence 54 431 124444 2444667778888887754
|
|
| >PRK10657 isoaspartyl dipeptidase; Provisional | Back alignment and domain information |
|---|
Probab=99.84 E-value=1.1e-19 Score=164.98 Aligned_cols=211 Identities=21% Similarity=0.266 Sum_probs=137.4
Q ss_pred EEEEccEEEecCCCCceeeeeeEEEeCCEEEEecCChhhhhhhcCCCceEEeCCCCEeeccccccCccchhhhhhcccCC
Q 022028 21 MILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIADD 100 (304)
Q Consensus 21 ~li~~~~ii~~~~~~~~~~~~~I~I~~g~I~~i~~~~~~~~~~~~~~~~vID~~g~iv~PG~ID~H~Hl~~s~~~g~~~~ 100 (304)
++|+|++|++.+. ..+++|.|+||+|++|++..+.... ..+.++||++|++|+|||||+|+|+.... . +
T Consensus 3 ~~i~~~~v~~~~~----~~~~~i~i~~g~I~~v~~~~~~~~~--~~~~~~id~~g~~v~PG~id~H~H~~~~~----~-~ 71 (388)
T PRK10657 3 TLLKNAHVYAPED----LGKKDILIAGGKIIAIADNINIPDI--VPDIEVIDASGKILVPGFIDQHVHIIGGG----G-E 71 (388)
T ss_pred EEEEccEEECCCC----CcceEEEEECCEEEEecCCcccccc--CCCCeEEECCCCEEcccceeeeeCcccCC----C-C
Confidence 6899999998652 3568999999999999875432111 12468999999999999999999996311 0 1
Q ss_pred CCccccccccccCccCCCChHHHHHHHHHHHHHHHhcCcceeecCCC-----CCH---HHHHHHHHHcCCeEEeeccccc
Q 022028 101 VDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGG-----QHV---SEMAKAVELLGLRACLVQSTMD 172 (304)
Q Consensus 101 ~~~~~~l~~~~~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~d~~~-----~~~---~~~~~~~~~~gir~~~~~~~~d 172 (304)
.. | ...+++ .++.+++++|+||++|+.+ ... ....+++.+.|+|.+.....++
T Consensus 72 ~~---~---------~~~t~~-------~~~~~~~~~GvTTvvd~~~~~~~~~~~~~~~~~~~~~~~~Gv~~~~~~~~~~ 132 (388)
T PRK10657 72 GG---F---------STRTPE-------VQLSDLTEAGITTVVGLLGTDGITRSMESLLAKARALEEEGISAYMYTGSYH 132 (388)
T ss_pred cc---c---------ccCCHH-------HHHHHHHhCCceEEECCCCCCCCCCCHHHHHHHHHHHHhhCCEEEEEecCCC
Confidence 00 1 112332 3566789999999999863 122 3345666789999985543332
Q ss_pred CCCCCCCCcccCChHHHHHHHHHHHHHHcCCCCCCeEEEEeeCcccCCCHHHHHHHHHHHHHhCC------eeeEEecCC
Q 022028 173 CGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKT------GIHMHVAEI 246 (304)
Q Consensus 173 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~e~l~~~~~~a~~~~~------~~~~H~~E~ 246 (304)
. +..+ ..+.+.+.....+++... + ++.+.++.....+++.++++.+.++..+. ++++|++|+
T Consensus 133 ~----~~~~----~~~~~~~~~~~~~~~~g~--g--~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~~g~~~~i~vH~~~~ 200 (388)
T PRK10657 133 V----PVRT----ITGSIRKDIVLIDKVIGV--G--EIAISDHRSSQPTVEELARLAAEARVGGLLSGKAGIVHVHMGDG 200 (388)
T ss_pred C----Cchh----hhcchhhceehhhhhhCc--c--eeeeccCCCCCCCHHHHHHHHHHHHHHHHhcCCCCEEEEEeCCc
Confidence 1 1100 011112222233333221 1 45667777778899999999988886554 799999986
Q ss_pred hhhHHHHHHhcCCCCCHH-HHHHHhCCCCCCeeEEEecc
Q 022028 247 PYENQVVMDTRKVDHGTV-TFLDKIEFLQNNLLSAHTVW 284 (304)
Q Consensus 247 ~~~~~~~~~~~g~~~~~~-~~l~~~g~l~~~~~~~H~~~ 284 (304)
....+ .+ +++++.|+...++...|+.+
T Consensus 201 ~~~l~-----------~v~~~l~~~Gv~~~~~~~~H~~~ 228 (388)
T PRK10657 201 KKGLQ-----------PLFELLENTDIPISQFLPTHVNR 228 (388)
T ss_pred hHHHH-----------HHHHHHHhcCCCcceeeCcccCC
Confidence 65433 34 67778899887877777775
|
|
| >PLN02303 urease | Back alignment and domain information |
|---|
Probab=99.82 E-value=9e-19 Score=165.23 Aligned_cols=211 Identities=17% Similarity=0.170 Sum_probs=131.6
Q ss_pred CCCCCCCCC-CCcccEEEEccEEEecCCCCceeeeeeEEEeCCEEEEecCChhhhh-h------hcCCCceEEeCCCCEe
Q 022028 7 GGGSSSGSL-GSSSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQ-Q------FSQMADQIIDLQSQIL 78 (304)
Q Consensus 7 ~~~~~~~~~-~~~~~~li~~~~ii~~~~~~~~~~~~~I~I~~g~I~~i~~~~~~~~-~------~~~~~~~vID~~g~iv 78 (304)
|+++++... ....+++|+|++|++.. . +..++|.|+||||++|++..++.. . ..+.+.++||++|++|
T Consensus 321 gm~~~~~~~~~~~~DlVItNa~IID~~---G-i~kaDI~IkDGrIvaIGkagnp~i~~gv~~~~~~g~~teVIDAeGlIV 396 (837)
T PLN02303 321 GMGQATGYGAADSLDTVITNAVIIDYT---G-IYKADIGIKDGLIVGIGKAGNPDVMDGVTSNMIVGVNTEVIAGEGMIV 396 (837)
T ss_pred CCCcCCCCCCcCcCCEEEeCeEEECCC---C-cEEeEEEEECCEEEEecCCCCcccccccccccccCCCCeEEECCCCEE
Confidence 445544432 22456899999999733 3 356799999999999997542210 0 0112468999999999
Q ss_pred eccccccCccchhhhhhcccCCCCccccccccccCccCCCChHHHHHHHHHHHHHHHhcCcceeecC-------CCCCHH
Q 022028 79 LPGFVNTHVHTSQQLAKGIADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEA-------GGQHVS 151 (304)
Q Consensus 79 ~PG~ID~H~Hl~~s~~~g~~~~~~~~~~l~~~~~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~d~-------~~~~~~ 151 (304)
+|||||+|+|+.. +.........+...++..|++++.+. +.....
T Consensus 397 tPG~ID~HVHf~~----------------------------Pg~~~eaLasGVTTai~GGtgp~pnT~ptt~t~g~e~I~ 448 (837)
T PLN02303 397 TAGGIDCHVHFIC----------------------------PQLATEAIASGITTLVGGGTGPAHGTCATTCTPAPSHMK 448 (837)
T ss_pred EeCEEEeecCCCC----------------------------CcHHHHHHHHhHHHHHhcCCCCCCcccCcCCCCCHHHHH
Confidence 9999999999832 11111222233344444444432111 111123
Q ss_pred HHHHHHHHcCCeEEeecccccCCCCCCCCcccCChHHHHHHHHHHHHHHcCCCCCCeEEEEeeCcccCCCHHHHHHHHHH
Q 022028 152 EMAKAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDM 231 (304)
Q Consensus 152 ~~~~~~~~~gir~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~e~l~~~~~~ 231 (304)
.++++.+...+...+. +.+.. ..+++..++++. |. .++.++..+.++++.+++++++
T Consensus 449 ~~L~aa~~~pvn~Gf~------gkG~~---------s~l~eL~eliea------Ga--~GfK~h~d~gvTpelL~raLe~ 505 (837)
T PLN02303 449 LMLQSTDDLPLNFGFT------GKGNT---------AKPEGLHEIIKA------GA--MGLKLHEDWGTTPAAIDNCLDV 505 (837)
T ss_pred HHHHhcccCCCcEEEE------ccCcc---------cCHHHHHHHHHc------Cc--EEEEECCCCCCCHHHHHHHHHH
Confidence 3444444444443221 11100 111222333221 22 2455666678899999999999
Q ss_pred HHHhCCeeeEEecCChhh---HHHHHHhcCCCCCHHHHHHHhCCCCC
Q 022028 232 AREFKTGIHMHVAEIPYE---NQVVMDTRKVDHGTVTFLDKIEFLQN 275 (304)
Q Consensus 232 a~~~~~~~~~H~~E~~~~---~~~~~~~~g~~~~~~~~l~~~g~l~~ 275 (304)
|+++++++++| +|+.++ .+.+++.||.+ +++++++.|+++.
T Consensus 506 AkelGVpVaIH-AEdLnE~G~vE~t~~a~G~R--pIh~~h~~Ga~gg 549 (837)
T PLN02303 506 AEEYDIQVTIH-TDTLNESGCVEHSIAAFKGR--TIHTYHSEGAGGG 549 (837)
T ss_pred HHHcCCEEEEe-cCcccccchHHHHHHHHCCC--hHHHHHhcCCCCC
Confidence 99999999999 799888 89999999984 9999999999984
|
|
| >TIGR01975 isoAsp_dipep isoaspartyl dipeptidase IadA | Back alignment and domain information |
|---|
Probab=99.79 E-value=3.3e-18 Score=153.66 Aligned_cols=194 Identities=20% Similarity=0.245 Sum_probs=125.5
Q ss_pred EEEEccEEEecCCCCceeeeeeEEEeCCEEEEecCChhhhhhhcCCCceEEeCCCCEeeccccccCccchhhhhhcccCC
Q 022028 21 MILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIADD 100 (304)
Q Consensus 21 ~li~~~~ii~~~~~~~~~~~~~I~I~~g~I~~i~~~~~~~~~~~~~~~~vID~~g~iv~PG~ID~H~Hl~~s~~~g~~~~ 100 (304)
++|+|++|++++. +.+.+|+|+||||++|++..++...++ ....++|++|++|+|||||+|+|+.... ..+
T Consensus 2 ~li~n~~v~~~~~----~~~~dvlI~~gkI~~Ig~~~~~~~~~~-~~~~i~d~~G~~v~PGlID~HvH~~~gg----~~~ 72 (389)
T TIGR01975 2 TLLKGAEVYAPEY----IGKKDILIANDKIIAIADEIPSTKDFV-PNCVVVGLEGMIAVPGFIDQHVHIIGGG----GEG 72 (389)
T ss_pred EEEECcEEEcCCc----CcceeEEEECCEEEEEcCCccccccCC-CCeEEECCCCCEEccCEeehhhcccccc----ccC
Confidence 5899999998642 357899999999999998765322121 1234556699999999999999997621 111
Q ss_pred CCccccccccccCccCCCChHHHHHHHHHHHHHHHhcCcceeecCCC-----CC---HHHHHHHHHHcCCeEEeeccccc
Q 022028 101 VDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGG-----QH---VSEMAKAVELLGLRACLVQSTMD 172 (304)
Q Consensus 101 ~~~~~~l~~~~~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~d~~~-----~~---~~~~~~~~~~~gir~~~~~~~~d 172 (304)
.. ...+++ .++.+++++||||++++.+ .+ .....++..+.|+|.+......+
T Consensus 73 ~~-------------~~~~~e-------~~~~e~l~~GvTTv~d~~g~~~~~~~~~~~~a~~~al~~~Gir~~~~~g~~~ 132 (389)
T TIGR01975 73 GP-------------TTRTPE-------LTLSDITKGGVTTVVGLLGTDGITRHMESLLAKARALEEEGISCYMLTGAYH 132 (389)
T ss_pred CC-------------ccCCHH-------HHHHHHHhCCcEEEecCcccCccccChhhHHHHHHHHHHhCCEEEEEccccc
Confidence 11 012333 2478899999999999764 22 33678889999999987765544
Q ss_pred CCCCCCCCcccCChHHHHHHHHHHHHHHcCCCCCCeEEEEeeCcccCCCHHHHHHHHHHHHHhC----Ce--eeEEecCC
Q 022028 173 CGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFK----TG--IHMHVAEI 246 (304)
Q Consensus 173 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~e~l~~~~~~a~~~~----~~--~~~H~~E~ 246 (304)
.. .... ...+.....+++... |.-++.++-+-....+-+.++.+.+.++.-| ++ +++|+...
T Consensus 133 ~p----~~t~----t~~~~~d~~~~d~ii----G~~~ia~sd~r~~~~~~~~l~~~~~~~~~~g~~~~~~g~~~vH~g~~ 200 (389)
T TIGR01975 133 VP----SRTI----TGSVESDLLLIDKVI----GVGEIAISDHRSAQPTVEHLTNMAAEARVGGLLGGKPGIVNFHVGDS 200 (389)
T ss_pred CC----Cccc----ccchhhheeeehhhc----ccceEEEccCcCCCCCHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCc
Confidence 21 1110 011111111222211 1112445555445667788888999999988 88 99999988
Q ss_pred hhhHHHHHH
Q 022028 247 PYENQVVMD 255 (304)
Q Consensus 247 ~~~~~~~~~ 255 (304)
+...+...+
T Consensus 201 ~~~l~~l~~ 209 (389)
T TIGR01975 201 KRALQPIYE 209 (389)
T ss_pred hhhHHHHHH
Confidence 776665544
|
The L-isoaspartyl derivative of Asp arises non-enzymatically over time as a form of protein damage. In this isomerization, the connectivity of the polypeptide changes to pass through the beta-carboxyl of the side chain. Much but not all of this damage can be repaired by protein-L-isoaspartate (D-aspartate) O-methyltransferase. This model describes the isoaspartyl dipeptidase IadA, apparently one of two such enzymes in E. coli, an enzyme that degrades isoaspartyl dipeptides and may unblock degradation of proteins that cannot be repaired. This model also describes closely related proteins from other species (e.g. Clostridium perfringens, Thermoanaerobacter tengcongensis) that we assume to be equivalent in function. This family shows homology to dihydroorotases. |
| >COG3964 Predicted amidohydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.78 E-value=3.1e-18 Score=142.06 Aligned_cols=214 Identities=18% Similarity=0.199 Sum_probs=129.8
Q ss_pred CCcccEEEEccEEEecCCCCceeeeeeEEEeCCEEEEecCChhhhhhhcCCCceEEeCCCCEeeccccccCccchhhhhh
Q 022028 16 GSSSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAK 95 (304)
Q Consensus 16 ~~~~~~li~~~~ii~~~~~~~~~~~~~I~I~~g~I~~i~~~~~~~~~~~~~~~~vID~~g~iv~PG~ID~H~Hl~~s~~~ 95 (304)
+|+.++++++++++++.. ..-...+|.|.||||.+++ ..+. +.+.++||+.|++|.|||||.|+|.++..
T Consensus 1 ~mqfdiLLt~~rlidpa~--g~d~~tniai~ngkIaa~~-d~~a-----pa~tq~Ida~Gc~VspG~iDlHvHvy~gg-- 70 (386)
T COG3964 1 MMQFDILLTGGRLIDPAR--GIDEITNIAIINGKIAAAD-DYPA-----PAETQIIDADGCIVSPGLIDLHVHVYYGG-- 70 (386)
T ss_pred CCccceeeeCCeeccccc--ccCccceeeeecCeEEecc-CcCC-----ChhheEEccCccEeccCeeeeeeEEecCC--
Confidence 467889999999998653 3446678999999999999 3332 23579999999999999999999997632
Q ss_pred cccCCCCccccccccccCccCCCChHHHHHHHHHHHHHHHhcCcceeecCCCCC---HHHHHHHH---HHcCCeEEeecc
Q 022028 96 GIADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQH---VSEMAKAV---ELLGLRACLVQS 169 (304)
Q Consensus 96 g~~~~~~~~~~l~~~~~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~d~~~~~---~~~~~~~~---~~~gir~~~~~~ 169 (304)
+.. ...|+. .+..+||||+.|.++.. .+.+.+.. ....+.+++...
T Consensus 71 ------t~~------------~v~pd~----------~ga~~GvTTvVDAGSaGaanf~gF~r~vie~Sr~RI~Aflnvs 122 (386)
T COG3964 71 ------TEG------------GVRPDM----------YGAPNGVTTVVDAGSAGAANFDGFYRTVIEASRVRIKAFLNVS 122 (386)
T ss_pred ------Ccc------------CcCHHH----------ccccCCceEEEecCCcCccchhhHHHHhhcchhheeeeeeecc
Confidence 110 111221 25689999999988643 23333322 222334433322
Q ss_pred cccCCCCCCCCcccCChHHHH--HHHHHHHHHHcCCCCCC-eEEEEeeCcccCCCHHHHHHHHHHHHHhCCeeeEEecCC
Q 022028 170 TMDCGEGLPASWAVRTTDDCI--QSQKELYAKHHHAADGR-IRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEI 246 (304)
Q Consensus 170 ~~d~g~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~-i~~~~~~~~~~~~~~e~l~~~~~~a~~~~~~~~~H~~E~ 246 (304)
. .|-.-+.+.. ..+.+ ++..+.++++.+.-.|+ ++..-...+.+..+| ++...+.|+..++++++|+.|.
T Consensus 123 ~--~Gl~a~nE~~---d~~nid~d~i~aa~reh~d~ivGlKvR~s~~~~g~~GitP--l~la~~ia~~~klPlmvHigeP 195 (386)
T COG3964 123 P--PGLTASNELY---DPDNIDEDKIHAAFREHRDVIVGLKVRVSTEDIGEYGITP--LTLALRIANDLKLPLMVHIGEP 195 (386)
T ss_pred C--cceeeehhhC---ChhhCCHHHHHHHHHhCcCcEEEEEEEeeeccccccCCch--HHHHHHHHhhcCCceEEecCCC
Confidence 1 1211111111 11111 23445555544321111 112222334567777 6667889999999999999997
Q ss_pred hhhHHHHHHhcCCCCCHHHHHHHhCCCCCCeeEEEeccCCcchh
Q 022028 247 PYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEV 290 (304)
Q Consensus 247 ~~~~~~~~~~~g~~~~~~~~l~~~g~l~~~~~~~H~~~l~~~di 290 (304)
....+.+.++ |++.-++.||.+-.+.-+
T Consensus 196 p~~~dEvler----------------L~~GDIitHcfngkpn~~ 223 (386)
T COG3964 196 PVLMDEVLER----------------LRRGDIITHCFNGKPNTI 223 (386)
T ss_pred CccHHHHHHh----------------ccCCceeeeeccCCCCCc
Confidence 7654433322 455668999998765444
|
|
| >PRK09357 pyrC dihydroorotase; Validated | Back alignment and domain information |
|---|
Probab=99.77 E-value=2.4e-17 Score=151.24 Aligned_cols=174 Identities=18% Similarity=0.265 Sum_probs=116.3
Q ss_pred EEEEccEEEecCCCCceeeeeeEEEeCCEEEEecCChhhhhhhcCCCceEEeCCCCEeeccccccCccchhhhhhcccCC
Q 022028 21 MILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIADD 100 (304)
Q Consensus 21 ~li~~~~ii~~~~~~~~~~~~~I~I~~g~I~~i~~~~~~~~~~~~~~~~vID~~g~iv~PG~ID~H~Hl~~s~~~g~~~~ 100 (304)
++|+|++|++.+ ..+.+++|.|+||+|.+|++... ..+.++||++|++|+|||||+|+|+...
T Consensus 3 ~~i~~~~v~~~~---~~~~~~~I~I~dg~I~~i~~~~~------~~~~~~iD~~g~~v~PG~ID~H~H~~~~-------- 65 (423)
T PRK09357 3 ILIKNGRVIDPK---GLDEVADVLIDDGKIAAIGENIE------AEGAEVIDATGLVVAPGLVDLHVHLREP-------- 65 (423)
T ss_pred EEEEeEEEECCC---CCcceeeEEEECCEEEEeeCCCC------CCCCeEEECCCCEEeCCEEecccccCCC--------
Confidence 789999999743 34578999999999999986421 1246899999999999999999997431
Q ss_pred CCccccccccccCccCCCChHHHHHHHHHHHHHHHhcCcceeecCCCC--------CHHHHHHHHHHcCCeEEeeccccc
Q 022028 101 VDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQ--------HVSEMAKAVELLGLRACLVQSTMD 172 (304)
Q Consensus 101 ~~~~~~l~~~~~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~d~~~~--------~~~~~~~~~~~~gir~~~~~~~~d 172 (304)
. ..+.++++..++. ++++||||++++... ..+...+++++.+++.+.....++
T Consensus 66 ~---------------~~~~e~~~~~~~~----a~~~GvTt~~d~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 126 (423)
T PRK09357 66 G---------------QEDKETIETGSRA----AAAGGFTTVVAMPNTKPVIDTPEVVEYVLDRAKEAGLVDVLPVGAIT 126 (423)
T ss_pred C---------------ccccccHHHHHHH----HHhCCCeEEEecCCCCCCCCcHHHHHHHHHHhccCCcccEEEEEEEE
Confidence 0 1123444444443 469999999987631 234455666666766555443333
Q ss_pred CCCCCCCCcccCChHHHHHHHHHHHHHHcCCCCCCeEEEEeeCcccCCCHHHHHHHHHHHHHhCCeeeEEecCChh
Q 022028 173 CGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPY 248 (304)
Q Consensus 173 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~e~l~~~~~~a~~~~~~~~~H~~E~~~ 248 (304)
.+ ... ..+++..++.+ .+ + ..+.+++.+.++++.++.+++.|+++|.++++|+.|+.-
T Consensus 127 ~~--~~~--------~~~~~~~~l~~------~g-v-~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~iH~ee~~~ 184 (423)
T PRK09357 127 KG--LAG--------EELTEFGALKE------AG-V-VAFSDDGIPVQDARLMRRALEYAKALDLLIAQHCEDPSL 184 (423)
T ss_pred eC--CCC--------ccHHHHHHHHh------CC-c-EEEECCCcccCCHHHHHHHHHHHHhcCCEEEEeCCCHHH
Confidence 22 111 11122222222 12 2 245566777788999999999999999999999987654
|
|
| >cd01297 D-aminoacylase D-aminoacylases (N-acyl-D-Amino acid amidohydrolases) catalyze the hydrolysis of N-acyl-D-amino acids to produce the corresponding D-amino acids, which are used as intermediates in the synthesis of pesticides, bioactive peptides, and antibiotics | Back alignment and domain information |
|---|
Probab=99.75 E-value=9.1e-17 Score=146.84 Aligned_cols=214 Identities=17% Similarity=0.137 Sum_probs=124.9
Q ss_pred EEEEccEEEecCCCCceeeeeeEEEeCCEEEEecCChhhhhhhcCCCceEEeCCCCEeeccccccCccchhhhhhcccCC
Q 022028 21 MILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIADD 100 (304)
Q Consensus 21 ~li~~~~ii~~~~~~~~~~~~~I~I~~g~I~~i~~~~~~~~~~~~~~~~vID~~g~iv~PG~ID~H~Hl~~s~~~g~~~~ 100 (304)
++|+|++|+++.+ .....++|.|+||||++|++..+ +.+.++||++|++|+|||||+|+|+......
T Consensus 2 ~~i~n~~v~~~~~--~~~~~~~i~I~~g~I~~i~~~~~------~~~~~~iD~~G~~v~PG~iD~H~H~~~~~~~----- 68 (415)
T cd01297 2 LVIRNGTVVDGTG--APPFTADVGIRDGRIAAIGPILS------TSAREVIDAAGLVVAPGFIDVHTHYDGQVFW----- 68 (415)
T ss_pred EEEECCEEECCCC--CccccceEEEECCEEEEEecCCC------CCCCeEEECCCCEEccCEeeeeecCCccccc-----
Confidence 6899999998543 23456899999999999986532 1246899999999999999999999652110
Q ss_pred CCccccccccccCccCCCChHHHHHHHHHHHHHHHhcCcceeecCCC---------------------------------
Q 022028 101 VDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGG--------------------------------- 147 (304)
Q Consensus 101 ~~~~~~l~~~~~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~d~~~--------------------------------- 147 (304)
. . ....++..||||+++...
T Consensus 69 -------------------~-~-------~~~~a~~~GvTt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 121 (415)
T cd01297 69 -------------------D-P-------DLRPSSRQGVTTVVLGNCGVSPAPANPDDLARLIMLMEGLVALGEGLPWGW 121 (415)
T ss_pred -------------------C-c-------chhhHHhCcEEEEEeccccCccCCCChhhhhhhhhhhhcccccccccCCCC
Confidence 0 0 012356789999876421
Q ss_pred CCHHHHHHHHHHc--CCeEEe--e-cccccCCCCCCCCcccCChHHHHHHHHHHHHHHcCCCCCCeEEEEeeCcccCCCH
Q 022028 148 QHVSEMAKAVELL--GLRACL--V-QSTMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATD 222 (304)
Q Consensus 148 ~~~~~~~~~~~~~--gir~~~--~-~~~~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 222 (304)
.......+.++.. .+.... . ..+....-+.. . ....++.+++..++++++.+.+.-.++.+..+......++
T Consensus 122 ~~~~~~~~~~~~~~~~~~~~~~~~h~~l~~~~~g~~--~-~~~~~~~~~~~~~l~~~al~~Ga~g~~~~~~y~~~~~~~~ 198 (415)
T cd01297 122 ATFAEYLDALEARPPAVNVAALVGHAALRRAVMGLD--A-REATEEELAKMRELLREALEAGALGISTGLAYAPRLYAGT 198 (415)
T ss_pred CCHHHHHHHHHhcCCCcCeeeccCcHHHHHHHhCcC--C-CCCCHHHHHHHHHHHHHHHHCCCeEEEcccccCCcccCCH
Confidence 0112223333222 222210 0 00000000000 0 0112344566677776655543323333322211125688
Q ss_pred HHHHHHHHHHHHhCCeeeEEecCCh-hhHHHHHHhcCCCCCHHHHHHHhCCCCCCeeEEEeccCCc
Q 022028 223 RLLLETRDMAREFKTGIHMHVAEIP-YENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNH 287 (304)
Q Consensus 223 e~l~~~~~~a~~~~~~~~~H~~E~~-~~~~~~~~~~g~~~~~~~~l~~~g~l~~~~~~~H~~~l~~ 287 (304)
+++.+++++++++|..+.+|+.+.. .+.+...+ .++..... +.++.+.|++....
T Consensus 199 ~~l~~~~~~a~~~g~~v~~H~e~~~~~e~~av~~-------~~~~a~~~---g~r~~i~H~ss~~~ 254 (415)
T cd01297 199 AELVALARVAARYGGVYQTHVRYEGDSILEALDE-------LLRLGRET---GRPVHISHLKSAGA 254 (415)
T ss_pred HHHHHHHHHHHHcCCEEEEEECcccccHHHHHHH-------HHHHHHHh---CCCEEEEEEecCCC
Confidence 8999999999999999999985432 23333222 33333333 45899999998876
|
|
| >PRK13309 ureC urease subunit alpha; Reviewed | Back alignment and domain information |
|---|
Probab=99.74 E-value=9.5e-17 Score=148.22 Aligned_cols=193 Identities=19% Similarity=0.196 Sum_probs=125.6
Q ss_pred cccEEEEccEEEecCCCCceeeeeeEEEeCCEEEEecCChhhhh-------hhcCCCceEEeCCCCEeeccccccCccch
Q 022028 18 SSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQ-------QFSQMADQIIDLQSQILLPGFVNTHVHTS 90 (304)
Q Consensus 18 ~~~~li~~~~ii~~~~~~~~~~~~~I~I~~g~I~~i~~~~~~~~-------~~~~~~~~vID~~g~iv~PG~ID~H~Hl~ 90 (304)
..+++|+|++|++.. ..+ ..++|.|+||||++|++...+.. ...+.+.++||++|++|+|||||+|+|+.
T Consensus 67 ~~DlVI~Ng~ViD~~--~gi-~kaDI~IkdGrI~aIG~~~~p~~~~~v~~~~~~g~~tevIDa~G~iVtPG~ID~HvH~~ 143 (572)
T PRK13309 67 VLDLVITNVTIVDAR--LGV-IKADVGIRDGKIVGIGKSGNPSTMDGVTQGMVVGVSTDAISGEHLILTAAGIDTHIHLI 143 (572)
T ss_pred cCCEEEECeEEEcCC--CCE-EEEEEEEECCEEEEecCCCccccccccccccccCCCceEEECCCCEEEeCEEEeecccC
Confidence 346899999999743 233 47899999999999987543210 00012468999999999999999999973
Q ss_pred hhhhhcccCCCCccccccccccCccCCCChHHHHHHHHHHHHHHHhcCcceeecCCC---------------CCHHHHHH
Q 022028 91 QQLAKGIADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGG---------------QHVSEMAK 155 (304)
Q Consensus 91 ~s~~~g~~~~~~~~~~l~~~~~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~d~~~---------------~~~~~~~~ 155 (304)
. |... ..++.+||||+.+.+. +....+.+
T Consensus 144 ~----------------------------P~~~--------~aAl~gGVTTvi~~G~gp~~~~n~~~~t~g~~~i~~~l~ 187 (572)
T PRK13309 144 S----------------------------PQQA--------YHALSNGVTTFFGGGIGPTDGTNGTTVTPGPWNIRQMLR 187 (572)
T ss_pred C----------------------------cchH--------HHHHcCceEEEEecCCCCccCCCCCCCCCCHHHHHHHHH
Confidence 3 1100 2478999999995320 01334455
Q ss_pred HHHHcCCeEEeecccccCCCCCCCCcccCChHHHHHHHHHHHHHHcCCCCCCeEEEEeeCcccCCCHHHHHHHHHHHHHh
Q 022028 156 AVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREF 235 (304)
Q Consensus 156 ~~~~~gir~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~e~l~~~~~~a~~~ 235 (304)
+++...+...+. +.+.. . .+.+..++++. |.+ ++..+..+..+++.+.+++++|+++
T Consensus 188 ~a~~~pvn~g~~------gkg~~------~---~~~~l~el~~a------Ga~--gfk~~~d~g~t~~~L~~aLe~A~~~ 244 (572)
T PRK13309 188 SIEGLPVNVGIL------GKGNS------Y---GRGPLLEQAIA------GVA--GYKVHEDWGATAAALRHALRVADEV 244 (572)
T ss_pred HhccCCcCEEEE------cCCCC------C---CHHHHHHHHhc------CcE--EEEecCcCCcCHHHHHHHHHHHHhc
Confidence 555444443211 11100 0 01222222221 322 2333334556899999999999999
Q ss_pred CCeeeEE---ecCChhhHHHHHHhcCCCCCHHHHHHHhCCCCC
Q 022028 236 KTGIHMH---VAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQN 275 (304)
Q Consensus 236 ~~~~~~H---~~E~~~~~~~~~~~~g~~~~~~~~l~~~g~l~~ 275 (304)
+.++.+| ++|. ..++.+.++++. ++++++...|+++.
T Consensus 245 gv~VaiH~d~lnE~-g~vE~~~aa~~g--rpih~~H~~Gaggg 284 (572)
T PRK13309 245 DIQVAVHTDSLNEC-GYVEDTIDAFEG--RTIHTFHTEGAGGG 284 (572)
T ss_pred CCEEEEeCCccccc-hhHHHHHHHhCC--CceeeeeccCcccC
Confidence 9999999 7777 667777888887 48999998888763
|
|
| >PLN02795 allantoinase | Back alignment and domain information |
|---|
Probab=99.74 E-value=1.8e-16 Score=147.69 Aligned_cols=186 Identities=15% Similarity=0.152 Sum_probs=109.8
Q ss_pred cccEEEEccEEEecCCCCceeeeeeEEEeCCEEEEecCChhhhhhhcCCCceEEeCCCCEeeccccccCccchhhhhhcc
Q 022028 18 SSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGI 97 (304)
Q Consensus 18 ~~~~li~~~~ii~~~~~~~~~~~~~I~I~~g~I~~i~~~~~~~~~~~~~~~~vID~~g~iv~PG~ID~H~Hl~~s~~~g~ 97 (304)
+.+++|+|++|++.+ .+ ..++|.|+||+|++|++..+....+ .+.++||++|++|+|||||+|+|+...
T Consensus 43 ~~~~vi~~~~vv~~~---~~-~~~~v~i~dG~I~~I~~~~~~~~~~--~~~~~ida~G~~v~PG~ID~H~H~~~~----- 111 (505)
T PLN02795 43 WPHFVLYSKRVVTPA---GV-IPGAVEVEGGRIVSVTKEEEAPKSQ--KKPHVLDYGNAVVMPGLIDVHVHLNEP----- 111 (505)
T ss_pred ccceEEECCEEEECC---Ce-EEEEEEEECCEEEEecCcccccccc--CCCEEEECCCCEEecCEEecccCcCCC-----
Confidence 367999999999854 33 3589999999999998754311101 145899999999999999999998431
Q ss_pred cCCCCccccccccccCccCCCChHHHHHHHHHHHHHHHhcCcceeecCCC-CC----HHHHHHHHHHcCCeEEeeccccc
Q 022028 98 ADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGG-QH----VSEMAKAVELLGLRACLVQSTMD 172 (304)
Q Consensus 98 ~~~~~~~~~l~~~~~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~d~~~-~~----~~~~~~~~~~~gir~~~~~~~~d 172 (304)
.+.. .+++.. ....++.+||||++|+.. .. .....+... +......+.+
T Consensus 112 ----~~~~--------------~e~~~~----~~~aa~~gGvTtv~dmp~~~~P~~~~~~~~~~~~----~~~~~~~~vd 165 (505)
T PLN02795 112 ----GRTE--------------WEGFPT----GTKAAAAGGITTLVDMPLNSFPSTTSVETLELKI----EAAKGKLYVD 165 (505)
T ss_pred ----Cccc--------------hhHHHH----HHHHHHcCCcEEEECCCCCCCCCCChHHHHHHHH----HHhccCceee
Confidence 0111 133333 334466799999999862 11 112222211 1111111222
Q ss_pred CCCCCCCCcccCChHHHHHHHHHHHHHHcCCCCCCeEEEEeeCccc---CCCHHHHHHHHHHHHHhCCeeeEEecCChh
Q 022028 173 CGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIM---NATDRLLLETRDMAREFKTGIHMHVAEIPY 248 (304)
Q Consensus 173 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~---~~~~e~l~~~~~~a~~~~~~~~~H~~E~~~ 248 (304)
.+. .... ...... ..+.++.+...+.-.+++++.+++.+ .++++.+.++++.++++|+++++|+ |...
T Consensus 166 ~~~--~~~~-~~~~~~----~~~~l~~~~~~G~~g~k~f~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~iH~-E~~~ 236 (505)
T PLN02795 166 VGF--WGGL-VPENAH----NASVLEELLDAGALGLKSFMCPSGINDFPMTTATHIKAALPVLAKYGRPLLVHA-EVVS 236 (505)
T ss_pred eec--eecc-cCcchh----HHHHHHHHHHCCCcEEEEEecccCCCCcccCCHHHHHHHHHHHHHhCCEEEEec-CChh
Confidence 111 0000 000111 12223333222222367777666543 5688899999999999999999996 4443
|
|
| >cd01299 Met_dep_hydrolase_A Metallo-dependent hydrolases, subgroup A is part of the superfamily of metallo-dependent hydrolases, a large group of proteins that show conservation in their 3-dimensional fold (TIM barrel) and in details of their active site | Back alignment and domain information |
|---|
Probab=99.73 E-value=5.4e-17 Score=144.89 Aligned_cols=188 Identities=16% Similarity=0.160 Sum_probs=115.5
Q ss_pred eEEeCCCCEeeccccccCccchhhhhhcccCCCCccccccccccCccCCCChHHHHHHHHHHHHHHHhcCcceeecCCCC
Q 022028 69 QIIDLQSQILLPGFVNTHVHTSQQLAKGIADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQ 148 (304)
Q Consensus 69 ~vID~~g~iv~PG~ID~H~Hl~~s~~~g~~~~~~~~~~l~~~~~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~d~~~~ 148 (304)
++||++|++|+|||||+|+|+.... .....|. ..+++.....+...+..+|.+||||++|+++.
T Consensus 2 ~vID~~g~~v~PGliD~H~Hl~~~~-------~~~~~~~---------~~~~~~~~~~~~~~~~~~l~~GvTtv~d~g~~ 65 (342)
T cd01299 2 QVIDLGGKTLMPGLIDAHTHLGSDP-------GDLPLDL---------ALPVEYRTIRATRQARAALRAGFTTVRDAGGA 65 (342)
T ss_pred cEEeCCCCEECCCeeeeeeeccccC-------CCccccc---------cCCHHHHHHHHHHHHHHHHhCCCcEEEeCCCc
Confidence 6899999999999999999986521 1111111 12455555566778889999999999999854
Q ss_pred CHHH---HHHHHHHcCCeEEeecccccCCCCCCCCc---------ccCChHHHHHHHHHHHHHHcCCCCCCeEEEEeeCc
Q 022028 149 HVSE---MAKAVELLGLRACLVQSTMDCGEGLPASW---------AVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQ 216 (304)
Q Consensus 149 ~~~~---~~~~~~~~gir~~~~~~~~d~g~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 216 (304)
.... ..+.....|.|.+.+........+..... .........++.++.+++....+.+.+|+++....
T Consensus 66 ~~~~~~~~~~~g~~~gPr~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~G~~~iK~~~~g~~ 145 (342)
T cd01299 66 DYGLLRDAIDAGLIPGPRVFASGRALSQTGGHGDPRGLSGLFPAGGLAAVVDGVEEVRAAVREQLRRGADQIKIMATGGV 145 (342)
T ss_pred chHHHHHHHHcCCccCCceeecchhhcccCCCCccccccccccccCCcceecCHHHHHHHHHHHHHhCCCEEEEeccCCc
Confidence 3222 12222234556655444332111111000 00001111233444555555556678888775321
Q ss_pred --------ccCCCHHHHHHHHHHHHHhCCeeeEEecCChhhHHHHHHhcCCCCCHHHHHHHhCCCCCCeeEEEeccCCcc
Q 022028 217 --------IMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHT 288 (304)
Q Consensus 217 --------~~~~~~e~l~~~~~~a~~~~~~~~~H~~E~~~~~~~~~~~~g~~~~~~~~l~~~g~l~~~~~~~H~~~l~~~ 288 (304)
...++++.++++++.|+++|+++.+|+.+.. .++.+.+.|. ..+.||.+++++
T Consensus 146 ~~~~~~~~~~~~~~e~l~~~~~~A~~~g~~v~~H~~~~~---------------~i~~~l~~G~----~~i~H~~~~~~~ 206 (342)
T cd01299 146 LSPGDPPPDTQFSEEELRAIVDEAHKAGLYVAAHAYGAE---------------AIRRAIRAGV----DTIEHGFLIDDE 206 (342)
T ss_pred CCCCCCCcccCcCHHHHHHHHHHHHHcCCEEEEEeCCHH---------------HHHHHHHcCC----CEEeecCCCCHH
Confidence 1257899999999999999999999986532 2344444554 258999999998
Q ss_pred hhc
Q 022028 289 EVN 291 (304)
Q Consensus 289 di~ 291 (304)
+++
T Consensus 207 ~~~ 209 (342)
T cd01299 207 TIE 209 (342)
T ss_pred HHH
Confidence 887
|
The vast majority of the members have a conserved metal binding site, involving four histidines and one aspartic acid residue. In the common reaction mechanism, the metal ion (or ions) deprotonate a water molecule for a nucleophilic attack on the substrate. The function of this subgroup is unknown. |
| >KOG2584 consensus Dihydroorotase and related enzymes [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.73 E-value=1.5e-16 Score=137.95 Aligned_cols=193 Identities=17% Similarity=0.244 Sum_probs=129.9
Q ss_pred CcccEEEEccEEEecCCCCceeeeeeEEEeCCEEEEecCChhhhhhhcCCCceEEeCCCCEeeccccccCccchhhhhhc
Q 022028 17 SSSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKG 96 (304)
Q Consensus 17 ~~~~~li~~~~ii~~~~~~~~~~~~~I~I~~g~I~~i~~~~~~~~~~~~~~~~vID~~g~iv~PG~ID~H~Hl~~s~~~g 96 (304)
+...++|+|++|+..|. . ...||+++||.|.+|+++..+ +.+.++||+.|++|+||.||.|+|+.+.
T Consensus 12 ~s~rllikgg~vvN~d~--~--~~aDV~vedGiI~~vg~~l~i-----pgg~~~ida~g~~ViPGgID~Hthlq~p---- 78 (522)
T KOG2584|consen 12 ASNRLLIKGGRVVNDDQ--S--FKADVYVEDGIIKEVGENLII-----PGGVKVIDATGKMVIPGGIDPHTHLQMP---- 78 (522)
T ss_pred cccceeeeCCEEEccCC--c--eeeeEEeccCEEEEecccEEc-----CCCceEEecCCcEEecCccCccceeccc----
Confidence 45568999999998652 2 356999999999999998764 3478999999999999999999999552
Q ss_pred ccCCCCccccccccccCccCCCChHHHHHHHHHHHHHHHhcCcceeecCCCC-CHHHHHHHHHHcCCeEEeecccccCCC
Q 022028 97 IADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQ-HVSEMAKAVELLGLRACLVQSTMDCGE 175 (304)
Q Consensus 97 ~~~~~~~~~~l~~~~~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~d~~~~-~~~~~~~~~~~~gir~~~~~~~~d~g~ 175 (304)
| ....+.++++.++.. +|..|+|++.|+.-. ....++++.+...-. .-...++|.|.
T Consensus 79 ------~-----------~G~ts~DdF~~GTkA----AlaGGtTmiID~vlp~~~~slv~afe~wr~~-Ad~k~cCDygl 136 (522)
T KOG2584|consen 79 ------F-----------MGMTSVDDFFQGTKA----ALAGGTTMIIDFVLPDKGTSLVEAFEKWREW-ADPKVCCDYGL 136 (522)
T ss_pred ------c-----------CCccchhhhhcccHH----HhcCCceEEEEEecCCCCchHHHHHHHHHhh-cCCceeeeeee
Confidence 1 122345667766554 678999999997521 112233333322111 01122334332
Q ss_pred CCC-CCcccCChHHHHHHHHHHHHHHcCCCCCCeEEEEeeCcccCCCHHHHHHHHHHHHHhCCeeeEEecCChhhHHH
Q 022028 176 GLP-ASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQV 252 (304)
Q Consensus 176 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~e~l~~~~~~a~~~~~~~~~H~~E~~~~~~~ 252 (304)
... ..|. ..+++..+.+.. +.+.+.++.+++....+.+++++|.+.++.+++.+...++|+ |+.+-++.
T Consensus 137 hv~It~W~-----~~v~eem~~l~~--ekGvnsF~~fmayk~~~~v~d~~lye~l~~~~~lgala~vHA-Engd~iae 206 (522)
T KOG2584|consen 137 HVGITWWS-----PSVKEEMEILVK--EKGVNSFKFFMAYKDLYMVRDSELYEALKVCAELGALAMVHA-ENGDAIAE 206 (522)
T ss_pred eEeeeecC-----cchHHHHHHHhh--hcCcceEEeeeeeccccccCHHHHHHHHHHHhhcchhheehh-hcchhhhh
Confidence 111 1222 223333444442 334567888999999999999999999999999999999995 77765544
|
|
| >TIGR03178 allantoinase allantoinase | Back alignment and domain information |
|---|
Probab=99.72 E-value=1.7e-16 Score=146.31 Aligned_cols=177 Identities=18% Similarity=0.152 Sum_probs=107.1
Q ss_pred cEEEEccEEEecCCCCceeeeeeEEEeCCEEEEecCChhhhhhhcCCCceEEeCCCCEeeccccccCccchhhhhhcccC
Q 022028 20 TMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIAD 99 (304)
Q Consensus 20 ~~li~~~~ii~~~~~~~~~~~~~I~I~~g~I~~i~~~~~~~~~~~~~~~~vID~~g~iv~PG~ID~H~Hl~~s~~~g~~~ 99 (304)
+++|+|++|+++++ . ..++|.|+||+|++|++... +.+.++||++|++|+|||||+|+|+....
T Consensus 1 dl~i~~~~v~~~~~---~-~~~~v~i~dg~I~~i~~~~~------~~~~~~id~~g~~v~PG~ID~H~H~~~~~------ 64 (443)
T TIGR03178 1 DLIIRGGRVILPNG---E-READVGVKGGKIAAIGPDIL------GPAAKIIDAGGLVVFPGVVDTHVHINEPG------ 64 (443)
T ss_pred CEEEECcEEECCCC---c-eEEEEEEECCEEEEeeCCCC------CCCCeEEECCCCEEeccEeccccccCCCC------
Confidence 36899999998652 2 46899999999999987532 12568999999999999999999985410
Q ss_pred CCCccccccccccCccCCCChHHHHHHHHHHHHHHHhcCcceeecCC-CC-C---HHHHHHHHHHcCC-eEEeecccccC
Q 022028 100 DVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAG-GQ-H---VSEMAKAVELLGL-RACLVQSTMDC 173 (304)
Q Consensus 100 ~~~~~~~l~~~~~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~d~~-~~-~---~~~~~~~~~~~gi-r~~~~~~~~d~ 173 (304)
... .+++. .+...++.+||||++++. .. . .....+...+... +..+...+. .
T Consensus 65 ---~~~--------------~~~~~----~~~~~~~~gGvTtv~dmp~~~~p~~~~~~~~~~~~~~~~~~~~~d~~~~-~ 122 (443)
T TIGR03178 65 ---RTE--------------WEGFE----TGTRAAAAGGITTYIDMPLNSIPATTTRASLEAKFEAAKGKLAVDVGFW-G 122 (443)
T ss_pred ---ccc--------------cchHH----HHHHHHHcCCeEEEEECCCCCCCCCCcHHHHHHHHHHhccCCceeEEEE-e
Confidence 000 12222 233457899999999985 21 1 1111222111111 111100000 0
Q ss_pred CCCCCCCcccCChHHHHHHHHHHHHHHcCCCCCCeEEEEeeCcc---cCCCHHHHHHHHHHHHHhCCeeeEEecCChhh
Q 022028 174 GEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQI---MNATDRLLLETRDMAREFKTGIHMHVAEIPYE 249 (304)
Q Consensus 174 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~---~~~~~e~l~~~~~~a~~~~~~~~~H~~E~~~~ 249 (304)
+ ..+ +..++ ++.+...+...+++++++.+. ...+++.+.++++.++++|+.+.+| +|+...
T Consensus 123 ~--~~~--------~~~~~----i~~~~~~G~~~ik~~~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H-~E~~~~ 186 (443)
T TIGR03178 123 G--LVP--------YNLDD----LRELDEAGVVGFKAFLSPSGDDEFPHVDDWQLYKGMRELARLGQLLLVH-AENPAI 186 (443)
T ss_pred c--cCC--------CCHHH----HHHHHHCCCcEEEEEecccCCCCcccCCHHHHHHHHHHHHhcCCeEEEe-ccChHH
Confidence 0 000 11122 233333333456777665443 3567888999999999999999999 677654
|
This enzyme carries out the first step in the degradation of allantoin, a ring-opening hydrolysis. The seed members of this model are all in the vicinity of other genes involved in the processes of xanthine/urate/allantoin catabolism. Although not included in the seed, many eukaryotic homologs of this family are included above the trusted cutoff. Below the noise cutoff are related hydantoinases. |
| >PRK09237 dihydroorotase; Provisional | Back alignment and domain information |
|---|
Probab=99.72 E-value=4.5e-16 Score=140.85 Aligned_cols=210 Identities=16% Similarity=0.156 Sum_probs=118.4
Q ss_pred EEEEccEEEecCCCCceeeeeeEEEeCCEEEEecCChhhhhhhcCCCceEEeCCCCEeeccccccCccchhhhhhcccCC
Q 022028 21 MILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIADD 100 (304)
Q Consensus 21 ~li~~~~ii~~~~~~~~~~~~~I~I~~g~I~~i~~~~~~~~~~~~~~~~vID~~g~iv~PG~ID~H~Hl~~s~~~g~~~~ 100 (304)
++|+|++|++... ......+|+|+||||++|++..+. +.+.++||++|++|+|||||+|+|+..+..
T Consensus 1 ~~i~~~~v~d~~~--~~~~~~~v~i~~g~I~~v~~~~~~-----~~~~~~iD~~g~~v~PG~iD~H~H~~~~~~------ 67 (380)
T PRK09237 1 LLLRGGRVIDPAN--GIDGVIDIAIEDGKIAAVAGDIDG-----SQAKKVIDLSGLYVSPGWIDLHVHVYPGST------ 67 (380)
T ss_pred CEEEeEEEECCCC--CcccceEEEEECCEEEEecCCCCC-----CCCCeEEECCCCEEecCEEEeeecCCCCCC------
Confidence 4789999998553 234668999999999999875431 124689999999999999999999864210
Q ss_pred CCccccccccccCccCCCChHHHHHHHHHHHHHHHhcCcceeecCCC---CCHHHHHHHHHHc-CCeEEeecccccCCCC
Q 022028 101 VDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGG---QHVSEMAKAVELL-GLRACLVQSTMDCGEG 176 (304)
Q Consensus 101 ~~~~~~l~~~~~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~d~~~---~~~~~~~~~~~~~-gir~~~~~~~~d~g~~ 176 (304)
.+ . .+. ...++..|+||++++.. ...+.+.+...+. +.+......+...++.
T Consensus 68 ----~~--------~--~~~----------~~~~~~~G~Ttv~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~g~~ 123 (380)
T PRK09237 68 ----PY--------G--DEP----------DEVGVRSGVTTVVDAGSAGADNFDDFRKLTIEASKTRVLAFLNISRIGLL 123 (380)
T ss_pred ----cc--------C--CCH----------HHHHHhCCcCEEEECCCCCCCCHHHHHHHHHhhhCcEEEEEEeeeccccc
Confidence 00 0 001 12368999999998653 2344555555544 6654332222212221
Q ss_pred CCCCcccCChHHHHHHHHHHHHHHcCCCCCC--eEEEEeeCcccCCCHHHHHHHHHHHHHhCCeeeEEecCChhhHHHHH
Q 022028 177 LPASWAVRTTDDCIQSQKELYAKHHHAADGR--IRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVM 254 (304)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--i~~~~~~~~~~~~~~e~l~~~~~~a~~~~~~~~~H~~E~~~~~~~~~ 254 (304)
.+. ..........++..++++++.. +. ++..+..........+.++...+++++.++++.+|+.+...+.+..
T Consensus 124 ~~~-~~~~~~~~~~~~~~~~~~~~~~---~v~glk~~~~~~v~~~~~~~~~~~~~~~a~~~g~~v~~H~~~~~~~~~~l- 198 (380)
T PRK09237 124 AQD-ELADLEDIDADAVAEAVKRNPD---FIVGIKARMSSSVVGDNGIEPLELAKAIAAEANLPLMVHIGNPPPSLEEI- 198 (380)
T ss_pred ccc-hhcCHhHCCHHHHHHHHHhCcC---cEEEEEEEEecccccccCCchHHHHHHHHHhcCCCEEEEcCCCCCCHHHH-
Confidence 111 1100111122344555554432 22 2333321111111113445556667789999999986654332221
Q ss_pred HhcCCCCCHHHHHHHhCCCCCCeeEEEeccCCc
Q 022028 255 DTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNH 287 (304)
Q Consensus 255 ~~~g~~~~~~~~l~~~g~l~~~~~~~H~~~l~~ 287 (304)
.+++.+..++.||++.++
T Consensus 199 ---------------~~~l~~g~~~~H~~~~~~ 216 (380)
T PRK09237 199 ---------------LELLRPGDILTHCFNGKP 216 (380)
T ss_pred ---------------HhhccCCCEEEecCCCCC
Confidence 112333447899999986
|
|
| >PRK09061 D-glutamate deacylase; Validated | Back alignment and domain information |
|---|
Probab=99.71 E-value=2.1e-15 Score=140.69 Aligned_cols=213 Identities=17% Similarity=0.149 Sum_probs=127.3
Q ss_pred CcccEEEEccEEEecCCCCceeeeeeEEEeCCEEEEecCChhhhhhhcCCCceEEeCCCCEeeccccccCccchhhhhhc
Q 022028 17 SSSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKG 96 (304)
Q Consensus 17 ~~~~~li~~~~ii~~~~~~~~~~~~~I~I~~g~I~~i~~~~~~~~~~~~~~~~vID~~g~iv~PG~ID~H~Hl~~s~~~g 96 (304)
++.+++|+|++|++++. .....++|.|+||+|++|++... .+.++||++|++|+|||||+|+|....
T Consensus 17 ~~~~~li~~~~vid~~~--~~~~~~~v~I~~G~I~~ig~~~~-------~~~~viD~~g~~v~PG~ID~H~H~~~~---- 83 (509)
T PRK09061 17 APYDLVIRNGRVVDPET--GLDAVRDVGIKGGKIAAVGTAAI-------EGDRTIDATGLVVAPGFIDLHAHGQSV---- 83 (509)
T ss_pred ccCCEEEECcEEEeCCC--CeeccceEEEECCEEEEecCCCC-------CCCeEEeCCCCEEecCeEeeeeCCCCC----
Confidence 34568999999998553 23345799999999999987431 246899999999999999999997420
Q ss_pred ccCCCCccccccccccCccCCCChHHHHHHHHHHHHHHHhcCcceeecCC-C-CCHHHHHHHHHHcC--CeEEeeccc--
Q 022028 97 IADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAG-G-QHVSEMAKAVELLG--LRACLVQST-- 170 (304)
Q Consensus 97 ~~~~~~~~~~l~~~~~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~d~~-~-~~~~~~~~~~~~~g--ir~~~~~~~-- 170 (304)
+ . ....+..||||+++.. + .......+.....+ +........
T Consensus 84 ---------~---------------~--------~~~~~~~GvTtvv~~~~~~~p~~~~~~~~~~~~~~vn~~~~~~~~~ 131 (509)
T PRK09061 84 ---------A---------------A--------YRMQAFDGVTTALELEAGVLPVARWYAEQAGEGRPLNYGASVGWTP 131 (509)
T ss_pred ---------c---------------c--------chhhccCCceeEEeeccCCCCHHHHHHHHHhcCCcceeehhcCcHH
Confidence 0 0 1124678999998862 2 22333344433333 232211111
Q ss_pred -----ccCCCCCC------------CCcc-cCChHHHHHHHHHHHHHHcCCCCCCeEEEEeeCcccCCCHHHHHHHHHHH
Q 022028 171 -----MDCGEGLP------------ASWA-VRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMA 232 (304)
Q Consensus 171 -----~d~g~~~~------------~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~e~l~~~~~~a 232 (304)
+. ++-+. ..+. .....+.+++..+++++..+.+...++.+.. .....+++.+.++++.|
T Consensus 132 ~R~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~t~~el~~m~~ll~~al~~Ga~gis~~~~--y~p~~~~~eL~~l~~~A 208 (509)
T PRK09061 132 ARIAVLT-GPQAEGTIADFGKALGDPRWQERAATPAELAEILELLEQGLDEGALGIGIGAG--YAPGTGHKEYLELARLA 208 (509)
T ss_pred HHHHHhC-CcccccccccccccccccccccCCCCHHHHHHHHHHHHHHHHCCCCEEecCCc--cCCCCCHHHHHHHHHHH
Confidence 11 10000 0011 0111234455566666555543333332121 22356888899999999
Q ss_pred HHhCCeeeEEecCChh-----hHHHHHHhcCCCCCHHHHHHHhCCCCCCeeEEEeccCCc
Q 022028 233 REFKTGIHMHVAEIPY-----ENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNH 287 (304)
Q Consensus 233 ~~~~~~~~~H~~E~~~-----~~~~~~~~~g~~~~~~~~l~~~g~l~~~~~~~H~~~l~~ 287 (304)
+++|..+.+|+.+... +.+.+.+ .++...+.|. ++.++|++.+..
T Consensus 209 ~~~g~~v~~H~e~~~~~~~~~e~~av~~-------~i~lA~~~G~---rv~IsHlss~g~ 258 (509)
T PRK09061 209 ARAGVPTYTHVRYLSNVDPRSSVDAYQE-------LIAAAAETGA---HMHICHVNSTSL 258 (509)
T ss_pred HHcCCEEEEEecCcccCCchhHHHHHHH-------HHHHHHHhCC---CEEEEeeccCCc
Confidence 9999999999875431 2233332 4555555564 788999988654
|
|
| >PRK15446 phosphonate metabolism protein PhnM; Provisional | Back alignment and domain information |
|---|
Probab=99.71 E-value=4e-16 Score=140.72 Aligned_cols=97 Identities=30% Similarity=0.439 Sum_probs=68.0
Q ss_pred ccEEEEccEEEecCCCCceeeeeeEEEeCCEEEEecCChhhhhhhcCCCceEEeCCCCEeeccccccCccchhhhhhccc
Q 022028 19 STMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIA 98 (304)
Q Consensus 19 ~~~li~~~~ii~~~~~~~~~~~~~I~I~~g~I~~i~~~~~~~~~~~~~~~~vID~~g~iv~PG~ID~H~Hl~~s~~~g~~ 98 (304)
++++|+|++|++.+ ..+ +++|.|+||||++|++..+ ...++||++|++|+|||||+|+|...
T Consensus 2 ~~~~i~~~~v~~~~---~~~-~~~i~i~~g~I~~i~~~~~-------~~~~~iDa~g~~v~PG~ID~H~h~~~------- 63 (383)
T PRK15446 2 MEMILSNARLVLPD---EVV-DGSLLIEDGRIAAIDPGAS-------ALPGAIDAEGDYLLPGLVDLHTDNLE------- 63 (383)
T ss_pred ccEEEECcEEEcCC---Cce-eeeEEEECCEEEEecCCCC-------CCCceEeCCCCEEEeCeEEcccCCcc-------
Confidence 45899999999854 344 7899999999999987532 13478999999999999999996531
Q ss_pred CCCCccccccccccCccCCCChHHHHHHHHHHHHHHHhcCcceeecC
Q 022028 99 DDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEA 145 (304)
Q Consensus 99 ~~~~~~~~l~~~~~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~d~ 145 (304)
..+.+|.... |+. .++++ .+.++++.+||||+.|+
T Consensus 64 --~~~~p~~~~~-~~~-----~~~~~----~~~~~a~~gG~Tt~~d~ 98 (383)
T PRK15446 64 --KHLAPRPGVD-WPA-----DAALA----AHDAQLAAAGITTVFDA 98 (383)
T ss_pred --cccCCCCCCc-cch-----HHHHH----HHHHHHHhCCccEeeee
Confidence 1222332211 221 12222 23367889999999996
|
|
| >cd01308 Isoaspartyl-dipeptidase Isoaspartyl dipeptidase hydrolyzes the beta-L-isoaspartyl linkages in dipeptides, as part of the degradative pathway to eliminate proteins with beta-L-isoaspartyl peptide bonds, bonds whereby the beta-group of an aspartate forms the peptide link with the amino group of the following amino acid | Back alignment and domain information |
|---|
Probab=99.71 E-value=1.1e-15 Score=138.61 Aligned_cols=188 Identities=21% Similarity=0.241 Sum_probs=114.1
Q ss_pred EEEEccEEEecCCCCceeeeeeEEEeCCEEEEecCChhhhhhhcCCCceEEeCCCCEeeccccccCccchhhhhhcccCC
Q 022028 21 MILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIADD 100 (304)
Q Consensus 21 ~li~~~~ii~~~~~~~~~~~~~I~I~~g~I~~i~~~~~~~~~~~~~~~~vID~~g~iv~PG~ID~H~Hl~~s~~~g~~~~ 100 (304)
++|+|++|++++. ..+++|+|+||+|++|++..+.+ ...+.++||++|++|+|||||+|+|+..... .
T Consensus 2 ~~i~~~~v~~~~~----~~~~~v~i~~g~I~~v~~~~~~~---~~~~~~~id~~g~~v~PG~id~H~H~~~~~~-----~ 69 (387)
T cd01308 2 TLIKNAEVYAPEY----LGKKDILIAGGKILAIEDQLNLP---GYENVTVVDLHGKILVPGFIDQHVHIIGGGG-----E 69 (387)
T ss_pred EEEECcEEeCCCC----ccceEEEEECCEEEEEeCCcccc---cCCCCeEEECCCCEEccCeeehhhCcccccC-----C
Confidence 4799999998542 36789999999999999765321 1125689999999999999999999964210 0
Q ss_pred CCccccccccccCccCCCChHHHHHHHHHHHHHHHhcCcceeecCCC-----CCH---HHHHHHHHHcCCeEEeeccccc
Q 022028 101 VDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGG-----QHV---SEMAKAVELLGLRACLVQSTMD 172 (304)
Q Consensus 101 ~~~~~~l~~~~~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~d~~~-----~~~---~~~~~~~~~~gir~~~~~~~~d 172 (304)
..+ ...+++ .++.+++.+|+||++|+.. ... ....+++.+.|+|.+.+..+++
T Consensus 70 ~~~------------~~~~~~-------~~~~~~~~~G~tt~~d~~~~~~~~~~~~~~~~~~~~~~~~Gv~~v~~~~~~~ 130 (387)
T cd01308 70 GGP------------STRTPE-------VTLSDLTTAGVTTVVGCLGTDGISRSMEDLLAKARALEEEGITCFVYTGSYE 130 (387)
T ss_pred Ccc------------cccCHH-------HHHHHHHhCCceEEecCcCCCCCCCCHHHHHHHHHHHHHhCCEEEEEecccC
Confidence 000 012222 2455789999999999762 122 2446666889999988765443
Q ss_pred CCCCCCCCcccCChHHHHHHHHHHHHHHcCCCCCCeEEEEeeCcccCCCHHHHHHHHHHHHHhCC------eeeEEecCC
Q 022028 173 CGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKT------GIHMHVAEI 246 (304)
Q Consensus 173 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~e~l~~~~~~a~~~~~------~~~~H~~E~ 246 (304)
.. .. ...+.++.....++.+.. .+ ...+..........+.+.++.+.++..+. .+++|..+.
T Consensus 131 ~~----~~----~~~~~~~~~~~~i~~~~~--~g--~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~vh~~~~ 198 (387)
T cd01308 131 VP----TR----TITGSIRKDLLLIDKVIG--VG--EIAISDHRSSQPTVEELARIAAEARVGGLLGGKAGIVHIHLGDG 198 (387)
T ss_pred CC----Cc----CchhhHHHHHHHHHHhcC--cc--eEEEcCCCCCCCCHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCc
Confidence 21 11 122333333344555432 12 12222222223455566667777765332 478888876
Q ss_pred hhhHH
Q 022028 247 PYENQ 251 (304)
Q Consensus 247 ~~~~~ 251 (304)
....+
T Consensus 199 ~~~~~ 203 (387)
T cd01308 199 KRALS 203 (387)
T ss_pred hHHHH
Confidence 54443
|
Formation of this bond is a spontaneous nonenzymatic reaction in nature and can profoundly effect the function of the protein. Isoaspartyl dipeptidase is an octameric enzyme that contains a binuclear zinc center in the active site of each subunit and shows a strong preference of hydrolyzing Asp-Leu dipeptides. |
| >cd01315 L-HYD_ALN L-Hydantoinases (L-HYDs) and Allantoinase (ALN); L-Hydantoinases are a member of the dihydropyrimidinase family, which catalyzes the reversible hydrolytic ring opening of dihydropyrimidines and hydantoins (five-membered cyclic diamides used in biotechnology) | Back alignment and domain information |
|---|
Probab=99.70 E-value=1.2e-15 Score=140.99 Aligned_cols=174 Identities=18% Similarity=0.223 Sum_probs=104.0
Q ss_pred cEEEEccEEEecCCCCceeeeeeEEEeCCEEEEecCChhhhhhhcCCCceEEeCCCCEeeccccccCccchhhhhhcccC
Q 022028 20 TMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIAD 99 (304)
Q Consensus 20 ~~li~~~~ii~~~~~~~~~~~~~I~I~~g~I~~i~~~~~~~~~~~~~~~~vID~~g~iv~PG~ID~H~Hl~~s~~~g~~~ 99 (304)
+++|+|++|++++ . ..+++|+|+||||++|++..+. ..+.++||++|++|+|||||+|+|+....
T Consensus 1 dl~i~~~~v~~~~---~-~~~~~v~I~~g~I~~i~~~~~~-----~~~~~~iDa~G~~v~PG~ID~H~H~~~~~------ 65 (447)
T cd01315 1 DLVIKNGRVVTPD---G-VREADIAVKGGKIAAIGPDIAN-----TEAEEVIDAGGLVVMPGLIDTHVHINEPG------ 65 (447)
T ss_pred CEEEECCEEECCC---C-ceEeEEEEECCEEEEEeCCCCC-----CCCCeEEECCCCEEeccEeeceeccCCCC------
Confidence 3689999999853 2 3568999999999999875421 13568999999999999999999985310
Q ss_pred CCCccccccccccCccCCCChHHHHHHHHHHHHHHHhcCcceeecCCCC------CHHHHHHHHHHcCCeEEeecccccC
Q 022028 100 DVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQ------HVSEMAKAVELLGLRACLVQSTMDC 173 (304)
Q Consensus 100 ~~~~~~~l~~~~~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~d~~~~------~~~~~~~~~~~~gir~~~~~~~~d~ 173 (304)
... .+++.. ..+.++.+||||++++... ..+.+....+.......+...+..
T Consensus 66 ---~~~--------------~e~~~~----~s~aal~gGvTtv~d~p~~~~p~~~~~~~~~~~~~~~~~~~~~d~~~~~- 123 (447)
T cd01315 66 ---RTE--------------WEGFET----GTKAAAAGGITTIIDMPLNSIPPTTTVENLEAKLEAAQGKLHVDVGFWG- 123 (447)
T ss_pred ---ccc--------------cccHHH----HHHHHHhCCceEEEeCCCCCCCCcCCHHHHHHHHHHhccCceeeEEEEE-
Confidence 000 112222 2334699999999998521 122222222222111111111100
Q ss_pred CCCCCCCcccCChHHHHHHHHHHHHHHcCCCCCCeEEEEeeCcc---cCCCHHHHHHHHHHHHHhCCeeeEEec
Q 022028 174 GEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQI---MNATDRLLLETRDMAREFKTGIHMHVA 244 (304)
Q Consensus 174 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~---~~~~~e~l~~~~~~a~~~~~~~~~H~~ 244 (304)
+ +... .+++.+++. ..+...+++++.+... ...+.+.+.++++.|+++|+++.+|+-
T Consensus 124 ~--~~~~--------~~~ei~~l~----~~G~~giKv~~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~vH~e 183 (447)
T cd01315 124 G--LVPG--------NLDQLRPLD----EAGVVGFKCFLCPSGVDEFPAVDDEQLEEAMKELAKTGSVLAVHAE 183 (447)
T ss_pred e--ecCC--------CHHHHHHHH----HcCCcEEEEEecccCCCCcccCCHHHHHHHHHHHHhcCCeEEEEcC
Confidence 0 0110 112222332 2233346666554332 235788899999999999999999963
|
But L-HYDs differ by having an L-enantio specificity and by lacking activity on possible natural substrates such as dihydropyrimidines. Allantoinase catalyzes the hydrolytic cleavage of the five-member ring of allantoin (5-ureidohydantoin) to form allantoic acid. |
| >cd00854 NagA N-acetylglucosamine-6-phosphate deacetylase, NagA, catalyzes the hydrolysis of the N-acetyl group of N-acetyl-glucosamine-6-phosphate (GlcNAc-6-P) to glucosamine 6-phosphate and acetate | Back alignment and domain information |
|---|
Probab=99.70 E-value=1.9e-16 Score=142.67 Aligned_cols=225 Identities=25% Similarity=0.289 Sum_probs=129.8
Q ss_pred EEEEccEEEecCCCCceeeeeeEEEeCCEEEEecCChhhhhhhcCCCceEEeCCCCEeeccccccCccchhhhhhcccCC
Q 022028 21 MILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIADD 100 (304)
Q Consensus 21 ~li~~~~ii~~~~~~~~~~~~~I~I~~g~I~~i~~~~~~~~~~~~~~~~vID~~g~iv~PG~ID~H~Hl~~s~~~g~~~~ 100 (304)
++|+|++|++. ....+++|.|+||||++|++..+. +...++||++|++|+|||||+|+|....
T Consensus 1 ~~i~~~~v~~~----~~~~~~~i~i~~g~I~~i~~~~~~-----~~~~~vid~~g~~l~PG~iD~H~H~~~g-------- 63 (374)
T cd00854 1 LIIKNARILTP----GGLEDGAVLVEDGKIVAIGPEDEL-----EEADEIIDLKGQYLVPGFIDIHIHGGGG-------- 63 (374)
T ss_pred CEEEeEEEeCC----CEEcccEEEEECCEEEEecCCCCc-----ccCCcEEECCCCEecccEEEeeecccCC--------
Confidence 36899999974 455788999999999999875432 1245899999999999999999998541
Q ss_pred CCccccccccccCccCCCChHHHHHHHHHHHHHHHhcCcceeecCCCC-CHHH-------HHHHHHHc-CCeEEeecccc
Q 022028 101 VDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQ-HVSE-------MAKAVELL-GLRACLVQSTM 171 (304)
Q Consensus 101 ~~~~~~l~~~~~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~d~~~~-~~~~-------~~~~~~~~-gir~~~~~~~~ 171 (304)
..+. ..+.+++ +.....+++.|||+++++... ..+. ..+..++- |.+.+ + +.
T Consensus 64 ~~~~------------~~~~e~~----~~~~~~~~~~GvTtv~~t~~t~~~~~~~~~l~~~~~~~~~~~g~~~~-g--~h 124 (374)
T cd00854 64 ADFM------------DGTAEAL----KTIAEALAKHGTTSFLPTTVTAPPEEIAKALAAIAEAIAEGQGAEIL-G--IH 124 (374)
T ss_pred CCCC------------CCCHHHH----HHHHHHHHccCcceeeccccCCCHHHHHHHHHHHHHHhhcCCCCeeE-E--Ee
Confidence 1110 0112332 334556889999999987521 1221 11221111 23321 1 12
Q ss_pred cCCCCCCCCcccCChHHHHH-HHHHHHHHHcCCCCCCeEEEEeeCcccCCCHHHH--HHHHHHHHHhCCeee-EEecCCh
Q 022028 172 DCGEGLPASWAVRTTDDCIQ-SQKELYAKHHHAADGRIRIWFGIRQIMNATDRLL--LETRDMAREFKTGIH-MHVAEIP 247 (304)
Q Consensus 172 d~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~e~l--~~~~~~a~~~~~~~~-~H~~E~~ 247 (304)
-+||++.+...+....+.++ ...+.++++.....+.+|+. +.+||+. .++.+.++++|+.+. -|..-+.
T Consensus 125 leGP~~~~~~~g~h~~~~~~~~~~~~~~~~~~~~~~~ik~~-------tlaPE~~~~~~~i~~~~~~gi~v~~GH~~a~~ 197 (374)
T cd00854 125 LEGPFISPEKKGAHPPEYLRAPDPEELKKWLEAAGGLIKLV-------TLAPELDGALELIRYLVERGIIVSIGHSDATY 197 (374)
T ss_pred eecCccCcccCCCCCHHHcCCcCHHHHHHHHHhcCCCEEEE-------EECCCCCChHHHHHHHHHCCeEEEeeCCcCCH
Confidence 25666655544443333322 22234444444344667753 3345555 678899999999995 8876443
Q ss_pred hhHHHHHHhcCCCCCHHHHH---------HHhCC----C-CCC--e-eEEEeccCCcchhc
Q 022028 248 YENQVVMDTRKVDHGTVTFL---------DKIEF----L-QNN--L-LSAHTVWVNHTEVN 291 (304)
Q Consensus 248 ~~~~~~~~~~g~~~~~~~~l---------~~~g~----l-~~~--~-~~~H~~~l~~~di~ 291 (304)
.+.....+ .|.+ .++++ ++.|. | .++ . ++.|+.+++++++.
T Consensus 198 ~~~~~a~~-~G~~--~~tH~~n~m~~~~~r~~~~~~a~l~~~~~~~~li~dg~Hv~~~~~~ 255 (374)
T cd00854 198 EQAVAAFE-AGAT--HVTHLFNAMSPLHHREPGVVGAALSDDDVYAELIADGIHVHPAAVR 255 (374)
T ss_pred HHHHHHHH-cCCC--eeeECCCCCCCcCCCCCcHHHHhhcCCCCeEEEEcCCCcCCHHHHH
Confidence 33333332 2432 12221 11111 2 221 2 67899999998876
|
This is the first committed step in the biosynthetic pathway to amino-sugar-nucleotides, which is needed for cell wall peptidoglycan and teichoic acid biosynthesis. Deacetylation of N-acetylglucosamine is also important in lipopolysaccharide synthesis and cell wall recycling. |
| >COG1228 HutI Imidazolonepropionase and related amidohydrolases [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=99.69 E-value=2.7e-16 Score=141.55 Aligned_cols=218 Identities=14% Similarity=0.126 Sum_probs=120.8
Q ss_pred cccEEEEccEEEecCCCCceeeeeeEEEeCCEEEEecCCh-hhhhhhcCCCceEEeCCCCEeeccccccCccchhhhhhc
Q 022028 18 SSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSA-DILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKG 96 (304)
Q Consensus 18 ~~~~li~~~~ii~~~~~~~~~~~~~I~I~~g~I~~i~~~~-~~~~~~~~~~~~vID~~g~iv~PG~ID~H~Hl~~s~~~g 96 (304)
...+.+.+++.++. ...++++.|+|+||||++|++.. .. +.+.++||++|++|+|||||+|+|+.+...++
T Consensus 9 ~~~~~~~~~~~~~~---~~~i~~~~v~i~~GkI~~vg~~~~~~-----~~~~~viD~~G~~V~PGLID~HtHl~~~~~~~ 80 (406)
T COG1228 9 IAMLATLAGRGLPG---LGIIEDGAVLIEDGKIVAVGPEEIDI-----PAGAEVIDAKGKTVTPGLIDAHTHLGFGGSRG 80 (406)
T ss_pred hhhheeeccccCCC---cceeecceEEEECCEEEEecCcccCC-----CCCCeEEeCCCCEEccceeeccccccccCCcc
Confidence 34567788888764 35667799999999999999873 22 23579999999999999999999998755443
Q ss_pred ccC-----CCCcccccc--ccccCccCC---CChHHHHHHHHHHHHHHHhcCcceeecCCCCCH-----HHHHHHHHHcC
Q 022028 97 IAD-----DVDLMTWLH--DRIWPYESN---MTEEDSYISTLLCGIELIHSGVTCFAEAGGQHV-----SEMAKAVELLG 161 (304)
Q Consensus 97 ~~~-----~~~~~~~l~--~~~~~~~~~---~~~e~~~~~~~~~~~~~l~~GvTtv~d~~~~~~-----~~~~~~~~~~g 161 (304)
... +.++...+. ..+++.... .+.......+...+..++..|+|+......... ..+.+.....+
T Consensus 81 ~~~~~~~~~~~~~~i~~~~~gi~~~~~~~~~a~~~g~~~~~~~~l~~~~~~g~~~~e~~~~~g~~~~~e~~~~~~~~~~~ 160 (406)
T COG1228 81 GEFELREAGASYTEILAAGGGILPLDRGFTTARDGGLKATALPRLKRAGSAGVTTGERKSGYGLDLETEGGHLRAAAGLK 160 (406)
T ss_pred chhhhcccCccHHHHHHhcCChhhhHHHHHHHhhcchHHHHHHHHHHHHHcCCcccceeeeecccccccccccchhhhcc
Confidence 211 111111111 011111111 112233344566678888899998754432211 11222222222
Q ss_pred C--eEEeecccccCCCCCCCCcccCChHHHHHHHHHHHHHHcCCCCCCeEEEEeeCcccCCCHHHHHHHHHHHHHhCCee
Q 022028 162 L--RACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGI 239 (304)
Q Consensus 162 i--r~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~e~l~~~~~~a~~~~~~~ 239 (304)
. ......... .-.+ .+.......+..++..+.+++..... ++....=..+.....++++++++++.|++.++++
T Consensus 161 ~~~~~~~~~t~~-~~~~-~~~~~~~~r~~~~~g~~~~i~~~a~~--~l~~~~d~~~~~~~fs~~e~~~~l~~a~~~g~~v 236 (406)
T COG1228 161 ESRPVAVGSTPL-AAHG-VPEERKATREAYVAGARLLIKIVATG--GLASFVDAFCEGGQFSPEEIRAVLAAALKAGIPV 236 (406)
T ss_pred ccccccccCccc-cccC-CcccccchHHHHHHHHHHHHHHHHhc--cccchhhccccccccCHHHHHHHHHHHHHCCCce
Confidence 1 000111110 0011 12222223344444444445554432 2221111122335678899999999999999999
Q ss_pred eEEecCCh
Q 022028 240 HMHVAEIP 247 (304)
Q Consensus 240 ~~H~~E~~ 247 (304)
.+|+++..
T Consensus 237 ~~HA~~~~ 244 (406)
T COG1228 237 KAHAHGAD 244 (406)
T ss_pred EEEecccc
Confidence 99987765
|
|
| >TIGR00221 nagA N-acetylglucosamine-6-phosphate deacetylase | Back alignment and domain information |
|---|
Probab=99.68 E-value=1.4e-15 Score=136.28 Aligned_cols=196 Identities=19% Similarity=0.206 Sum_probs=121.8
Q ss_pred ccEEEEccEEEecCCCCceeeeeeEEEeCCEEEEecCChhhhhhhcCCCceEEeCCCCEeeccccccCccchhhhhhccc
Q 022028 19 STMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIA 98 (304)
Q Consensus 19 ~~~li~~~~ii~~~~~~~~~~~~~I~I~~g~I~~i~~~~~~~~~~~~~~~~vID~~g~iv~PG~ID~H~Hl~~s~~~g~~ 98 (304)
.+++|+|++|++.+ ..+.+++|.|+||||++|++..+. + .+.++||++|++|+|||||+|+|.....
T Consensus 3 ~~~~i~n~~i~~~~---~~~~~~~i~V~dGkI~~I~~~~~~----~-~~~~viD~~G~~i~PGfID~HvHg~~g~----- 69 (380)
T TIGR00221 3 ESYLLKDIAIVTGN---EVIDNGAVGINDGKISTVSTEAEL----E-PEIKEIDLPGNVLTPGFIDIHIHGCGGV----- 69 (380)
T ss_pred ceEEEEeeEEECCC---CEEeccEEEEECCEEEEEcccccC----C-CCCeEEECCCCEEccceeeeeeccccCc-----
Confidence 34889999999854 566789999999999999875432 1 2457999999999999999999985411
Q ss_pred CCCCccccccccccCccCCCChHHHHHHHHHHHHHHHhcCcceeecCCCC-CHH---HHHHHHHH----cCCeEEeeccc
Q 022028 99 DDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQ-HVS---EMAKAVEL----LGLRACLVQST 170 (304)
Q Consensus 99 ~~~~~~~~l~~~~~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~d~~~~-~~~---~~~~~~~~----~gir~~~~~~~ 170 (304)
.+. ..+.+++. .....+++.|||+++..... ..+ ..++...+ ..-...++ +
T Consensus 70 ---~~~------------~~~~e~~~----~~~~~~~~~GvTt~l~t~~t~~~~~~~~~l~~~~~~~~~~~~a~~lG--~ 128 (380)
T TIGR00221 70 ---DTN------------DASFETLE----IMSERLPKSGCTSFLPTLITQPDENIKQAVKNMREYLAKEKNAQALG--L 128 (380)
T ss_pred ---CCC------------CCCHHHHH----HHHHHHHhcCeeEEeeeccCCCHHHHHHHHHHHHHHHhccCCceeee--E
Confidence 110 01233333 33456788999999876422 111 11222211 10001122 2
Q ss_pred ccCCCCCCCCcccCChHHHHH-HHHHHHHHHcCCCCCCeE-EEEeeCcccCCCHHHHHHHHHHHHHhCCeeeEEecCChh
Q 022028 171 MDCGEGLPASWAVRTTDDCIQ-SQKELYAKHHHAADGRIR-IWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPY 248 (304)
Q Consensus 171 ~d~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~i~-~~~~~~~~~~~~~e~l~~~~~~a~~~~~~~~~H~~E~~~ 248 (304)
.-+||++++.+.+.++.+.++ -..+.++++.+...+.++ +.++|.-+ -. .++.+.+.++|+.+. +.++..
T Consensus 129 HlEGPfi~~~~~Gah~~~~i~~p~~~~~~~~~~~~~~~i~~vTlAPE~~--~~----~~~i~~l~~~gi~vs--~GHs~A 200 (380)
T TIGR00221 129 HLEGPFLSPEKKGAHPPEYIREPDVELFKKFLCEAGGVITKVTLAPEED--QH----FELIRHLKDAGIIVS--AGHTNA 200 (380)
T ss_pred eeecCcCChhhcCCCCHHHhhCcCHHHHHHHHHhcCCCEEEEEECCCCC--Ch----HHHHHHHHHCCeEEE--eeCCCC
Confidence 227899999999999988887 344666666654456665 33444321 12 235566777787655 455555
Q ss_pred hHHHHHHh
Q 022028 249 ENQVVMDT 256 (304)
Q Consensus 249 ~~~~~~~~ 256 (304)
..+++.+.
T Consensus 201 ~~~~~~~a 208 (380)
T TIGR00221 201 TYELAKAA 208 (380)
T ss_pred CHHHHHHH
Confidence 56666553
|
|
| >PRK13404 dihydropyrimidinase; Provisional | Back alignment and domain information |
|---|
Probab=99.68 E-value=1.9e-15 Score=140.10 Aligned_cols=184 Identities=19% Similarity=0.272 Sum_probs=107.7
Q ss_pred CcccEEEEccEEEecCCCCceeeeeeEEEeCCEEEEecCChhhhhhhcCCCceEEeCCCCEeeccccccCccchhhhhhc
Q 022028 17 SSSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKG 96 (304)
Q Consensus 17 ~~~~~li~~~~ii~~~~~~~~~~~~~I~I~~g~I~~i~~~~~~~~~~~~~~~~vID~~g~iv~PG~ID~H~Hl~~s~~~g 96 (304)
|+.+++|+|++|++.+ .. .+++|+|+||+|++|++..+ .+.++||++|++|+|||||+|+|+......+
T Consensus 2 ~~~d~~i~~~~v~~~~---~~-~~~~i~I~dg~I~~i~~~~~-------~~~~~iD~~G~~v~PG~ID~H~H~~~~~~~~ 70 (477)
T PRK13404 2 MAFDLVIRGGTVVTAT---DT-FQADIGIRGGRIAALGEGLG-------PGAREIDATGRLVLPGGVDSHCHIDQPSGDG 70 (477)
T ss_pred CCCcEEEECCEEEcCC---Cc-eEEEEEEECCEEEEecCCCC-------CCCeEEECCCCEEecCEEEeEEcCCccccCC
Confidence 4456889999999854 23 36899999999999986431 2458999999999999999999996521000
Q ss_pred ccCCCCccccccccccCccCCCChHHHHHHHHHHHHHHHhcCcceeecCCCC----CHHHHHHHHHHc-CCeEEeecccc
Q 022028 97 IADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQ----HVSEMAKAVELL-GLRACLVQSTM 171 (304)
Q Consensus 97 ~~~~~~~~~~l~~~~~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~d~~~~----~~~~~~~~~~~~-gir~~~~~~~~ 171 (304)
+ ...+++... ...++..||||++++... .....++..... .-+.++
T Consensus 71 ------~--------------~~~e~~~~~----s~aa~~gGvTtv~~~~~~~~~~~~~~~l~~~~~~~~~~~~v----- 121 (477)
T PRK13404 71 ------I--------------MMADDFYTG----TVSAAFGGTTTVIPFAAQHRGQSLREAVEDYHRRAAGKAVI----- 121 (477)
T ss_pred ------c--------------cccchHHHH----HHHHHcCCccEEEEccCCCCCCCHHHHHHHHHHHhccCcEE-----
Confidence 0 012333332 334568999999997532 122222222211 111111
Q ss_pred cCCCCCCCCcccCChHHHHHHHHHHHHHHcCCCCCCeEEEEeeCcccCCCHHHHHHHHHHHHHhCCeeeEEecCChh
Q 022028 172 DCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPY 248 (304)
Q Consensus 172 d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~e~l~~~~~~a~~~~~~~~~H~~E~~~ 248 (304)
+.+....... ...+...++..++. ..+...+|+++.... ...+++.+.++++.|+++|.++.+|+ |...
T Consensus 122 d~~~~~~~~~--~~~~~~~~~v~~l~----~~G~~~iKi~~~~~~-~~~~~~~l~~~~~~a~~~g~~V~~Ha-e~~~ 190 (477)
T PRK13404 122 DYAFHLIVAD--PTEEVLTEELPALI----AQGYTSFKVFMTYDD-LKLDDRQILDVLAVARRHGAMVMVHA-ENHD 190 (477)
T ss_pred EEEEEEEecC--CChhhHHHHHHHHH----HcCCCEEEEEecCCC-CCCCHHHHHHHHHHHHhcCCEEEEEe-CCHH
Confidence 1110000000 00111112333332 233456776654222 45678889999999999999999996 5443
|
|
| >PRK13985 ureB urease subunit beta; Provisional | Back alignment and domain information |
|---|
Probab=99.68 E-value=4.4e-15 Score=135.67 Aligned_cols=179 Identities=20% Similarity=0.269 Sum_probs=110.7
Q ss_pred CCCCCCCCCCCcccEEEEccEEEecCCCCceeeeeeEEEeCCEEEEecCChhhhhh-------hcCCCceEEeCCCCEee
Q 022028 7 GGGSSSGSLGSSSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQ-------FSQMADQIIDLQSQILL 79 (304)
Q Consensus 7 ~~~~~~~~~~~~~~~li~~~~ii~~~~~~~~~~~~~I~I~~g~I~~i~~~~~~~~~-------~~~~~~~vID~~g~iv~ 79 (304)
|+++++.......+++|+|++|++.. .+ ..++|.|+||||++|++..++... ....+.++||++|++|+
T Consensus 53 g~~~~~~~~~~~~DlVI~Na~IiD~~---gi-~kaDI~IkdGrIaaIG~~gn~~~~~~v~~~~~ig~~tevIDa~G~iV~ 128 (568)
T PRK13985 53 GMSQSNNPSKEELDLIITNALIIDYT---GI-YKADIGIKDGKIAGIGKGGNKDMQDGVKNNLSVGPATEALAGEGLIVT 128 (568)
T ss_pred CCCCCCCCCCCcCCEEEECeEEECCC---Cc-EEEEEEEECCEEEEeecCCCccccccccccccCCCCceEEECCCCEEE
Confidence 44554443334567899999999732 33 467999999999999975432100 00135689999999999
Q ss_pred ccccccCccchhhhhhcccCCCCccccccccccCccCCCChHHHHHHHHHHHHHHHhcCcceeecCCC-----C------
Q 022028 80 PGFVNTHVHTSQQLAKGIADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGG-----Q------ 148 (304)
Q Consensus 80 PG~ID~H~Hl~~s~~~g~~~~~~~~~~l~~~~~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~d~~~-----~------ 148 (304)
|||||+|+|+.. |... ..++.+||||+.+.+. .
T Consensus 129 PG~ID~HvH~~~----------------------------P~~~--------~~AlagGVTTvI~~G~gP~~~T~p~~~t 172 (568)
T PRK13985 129 AGGIDTHIHFIS----------------------------PQQI--------PTAFASGVTTMIGGGTGPADGTNATTIT 172 (568)
T ss_pred eCEEEeeCCCCC----------------------------ccHH--------HHHhcCceEEEEccCcCCCCCCCCcCCC
Confidence 999999999832 1111 2378999999998421 0
Q ss_pred ----CHHHHHHHHHHcCCeEEeecccccCCCCCCCCcccCChHHHHHHHHHHHHHHcCCCCCCeEEEEeeCcccCCCHHH
Q 022028 149 ----HVSEMAKAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRL 224 (304)
Q Consensus 149 ----~~~~~~~~~~~~gir~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~e~ 224 (304)
....+.+.++...+...+ . +.+.. ..+++..++++. |.+ ++..+..+..++..
T Consensus 173 pg~~~i~~ml~~a~~~pvn~gf----~--gkG~~---------~~l~eL~el~~a------GA~--GfK~~ed~g~t~~~ 229 (568)
T PRK13985 173 PGRRNLKWMLRAAEEYSMNLGF----L--GKGNS---------SNDASLADQIEA------GAI--GFKIHEDWGTTPSA 229 (568)
T ss_pred CcHHHHHHHHHHhhccCccEEE----e--cCCcc---------CCHHHHHHHHHc------CCE--EEEECCccCCCHHH
Confidence 123444554544433211 1 11110 111223333321 322 33344445678999
Q ss_pred HHHHHHHHHHhCCeeeEEecCChhh
Q 022028 225 LLETRDMAREFKTGIHMHVAEIPYE 249 (304)
Q Consensus 225 l~~~~~~a~~~~~~~~~H~~E~~~~ 249 (304)
+..++++|++++.++.+|+ ++.++
T Consensus 230 I~~aL~vA~~~dv~V~iHt-dtlne 253 (568)
T PRK13985 230 INHALDVADKYDVQVAIHT-DTLNE 253 (568)
T ss_pred HHHHHHHHHHcCCEEEEeC-CCCCC
Confidence 9999999999999999996 44443
|
|
| >PRK13308 ureC urease subunit alpha; Reviewed | Back alignment and domain information |
|---|
Probab=99.67 E-value=2.4e-15 Score=137.90 Aligned_cols=176 Identities=19% Similarity=0.241 Sum_probs=108.2
Q ss_pred CCCCCCCCC--CCcccEEEEccEEEecCCCCceeeeeeEEEeCCEEEEecCChhhhh-------hhcCCCceEEeCCCCE
Q 022028 7 GGGSSSGSL--GSSSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQ-------QFSQMADQIIDLQSQI 77 (304)
Q Consensus 7 ~~~~~~~~~--~~~~~~li~~~~ii~~~~~~~~~~~~~I~I~~g~I~~i~~~~~~~~-------~~~~~~~~vID~~g~i 77 (304)
|+++++... ....+++|+|++|+++.. . +..++|.|+||||++|++..++.. ...+.+.++||++|++
T Consensus 54 g~~~~~~~~~~~~~~DlVItNa~IIDp~~--G-i~kaDIgIkDGrIaaIG~~~npd~~~gv~p~~~~g~~teVIDaeG~I 130 (569)
T PRK13308 54 GMGMAPGVTSADGALDFVLCNVTVIDPVL--G-IVKGDIGIRDGRIVGIGKAGNPDIMDGVDPRLVVGPGTDVRPAEGLI 130 (569)
T ss_pred CCCCCCCCCCccCcCCEEEECeEEEcCCC--C-eEEeEEEEECCEEEEecCCCCccccccccccccCCCCCeEEECCCCE
Confidence 455544433 224568999999997432 3 357899999999999997542210 0011356899999999
Q ss_pred eeccccccCccchhhhhhcccCCCCccccccccccCccCCCChHHHHHHHHHHHHHHHhcCcceeecCC--C------C-
Q 022028 78 LLPGFVNTHVHTSQQLAKGIADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAG--G------Q- 148 (304)
Q Consensus 78 v~PG~ID~H~Hl~~s~~~g~~~~~~~~~~l~~~~~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~d~~--~------~- 148 (304)
|+|||||+|+|+.. +... ..++.+||||+++.+ + .
T Consensus 131 VtPG~ID~HVH~~~----------------------------Pg~~--------~aALagGVTTVi~gg~gPt~p~~t~g 174 (569)
T PRK13308 131 ATPGAIDVHVHFDS----------------------------AQLV--------DHALASGITTMLGGGLGPTVGIDSGG 174 (569)
T ss_pred EEeCEEEeeeCCCC----------------------------ccHH--------HHHHcCCCcEEecCCcCCCCCCCCCC
Confidence 99999999999843 0000 357899999999742 1 1
Q ss_pred --CHHHHHHHHHHcCCeEEeecccccCCCCCCCCcccCChHHHHHHHHHHHHHHcCCCCCCeEEEEeeCcccCCCHHHHH
Q 022028 149 --HVSEMAKAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLL 226 (304)
Q Consensus 149 --~~~~~~~~~~~~gir~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~e~l~ 226 (304)
....+.++++...+...+ . +.+.. ...+...++++ . |.+ ++..+.-+..+++.+.
T Consensus 175 ~~~i~~~l~aa~~~pvN~g~----~--gkG~~---------s~~aeL~eli~----a--GA~--GfKi~ed~g~t~~~i~ 231 (569)
T PRK13308 175 PFNTGRMLQAAEAWPVNFGF----L--GRGNS---------SKPAALIEQVE----A--GAC--GLKIHEDWGAMPAAID 231 (569)
T ss_pred HHHHHHHHHHHhcCCccEEE----E--cCCcc---------cCHHHHHHHHH----C--CCC--EEeecCCCCCCHHHHH
Confidence 133445554443333211 1 11110 01122333332 1 222 2223333456889999
Q ss_pred HHHHHHHHhCCeeeEEec
Q 022028 227 ETRDMAREFKTGIHMHVA 244 (304)
Q Consensus 227 ~~~~~a~~~~~~~~~H~~ 244 (304)
++++.|+++++++.+|+.
T Consensus 232 ~aL~~A~~~dv~VaiHad 249 (569)
T PRK13308 232 TCLEVADEYDFQVQLHTD 249 (569)
T ss_pred HHHHHHHhcCCEEEEeCC
Confidence 999999999999999963
|
|
| >cd00375 Urease_alpha Urease alpha-subunit; Urease is a nickel-dependent metalloenzyme that catalyzes the hydrolysis of urea to form ammonia and carbon dioxide | Back alignment and domain information |
|---|
Probab=99.67 E-value=8.5e-15 Score=134.24 Aligned_cols=179 Identities=21% Similarity=0.263 Sum_probs=110.5
Q ss_pred CCCCCCCCC-CCcccEEEEccEEEecCCCCceeeeeeEEEeCCEEEEecCChhhhh-------hhcCCCceEEeCCCCEe
Q 022028 7 GGGSSSGSL-GSSSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQ-------QFSQMADQIIDLQSQIL 78 (304)
Q Consensus 7 ~~~~~~~~~-~~~~~~li~~~~ii~~~~~~~~~~~~~I~I~~g~I~~i~~~~~~~~-------~~~~~~~~vID~~g~iv 78 (304)
|+++++... ....+++|+|++|++.. .+ ..++|.|+||||++|++..++.. ...+.+.++||++|++|
T Consensus 52 g~~~~~~~~~~~~~DlVI~Na~IiD~~---gi-~~adI~IkdGrIvaIG~agnp~~~~~v~~~~~~g~~teVIDaeG~iV 127 (567)
T cd00375 52 GMGQSSGYTREDVLDLVITNALIIDYT---GI-YKADIGIKDGRIVAIGKAGNPDIMDGVTPNMIVGPSTEVIAGEGKIV 127 (567)
T ss_pred CCCCCCCCCccccCCEEEECeEEECCC---Cc-EEEEEEEECCEEEEEecCCCccccccccccccCCCCCeEEECCCCEE
Confidence 455554443 22456899999999743 23 46899999999999987642110 01123568999999999
Q ss_pred eccccccCccchhhhhhcccCCCCccccccccccCccCCCChHHHHHHHHHHHHHHHhcCcceeecC--CC---------
Q 022028 79 LPGFVNTHVHTSQQLAKGIADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEA--GG--------- 147 (304)
Q Consensus 79 ~PG~ID~H~Hl~~s~~~g~~~~~~~~~~l~~~~~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~d~--~~--------- 147 (304)
+|||||+|+|+.. |.. ...++.+||||+.++ .+
T Consensus 128 ~PG~ID~HvH~~~----------------------------P~~--------~~aAlagGVTTvI~~G~gP~~gtnatp~ 171 (567)
T cd00375 128 TAGGIDTHVHFIC----------------------------PQQ--------IEEALASGITTMIGGGTGPAAGTKATTC 171 (567)
T ss_pred eeceEECccCCCC----------------------------ccH--------HHHHHcCCCcEEEcCCcCcccccCCCCC
Confidence 9999999999732 111 135789999999985 11
Q ss_pred ----CCHHHHHHHHHHcCCeEEeecccccCCCCCCCCcccCChHHHHHHHHHHHHHHcCCCCCCeEEEEeeCcccCCCHH
Q 022028 148 ----QHVSEMAKAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDR 223 (304)
Q Consensus 148 ----~~~~~~~~~~~~~gir~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~e 223 (304)
+....+.+.++...+...+.. .+ . ...++...++++. |.+ ++..+.-+..++.
T Consensus 172 t~g~~~l~~ml~aa~~~pin~g~~g----kg--~---------~~~l~eL~e~~~a------GA~--GfK~~eD~g~t~~ 228 (567)
T cd00375 172 TPGPWNIKRMLQAADGLPVNIGFLG----KG--N---------GSSPDALAEQIEA------GAC--GLKLHEDWGATPA 228 (567)
T ss_pred CCCHHHHHHHHHHhhcCCceEEEEe----cC--c---------cccHHHHHHHHHc------CCE--EEEecCCCCCCHH
Confidence 112344555554443332110 11 0 0111222233221 322 2333334567899
Q ss_pred HHHHHHHHHHHhCCeeeEEecCChhh
Q 022028 224 LLLETRDMAREFKTGIHMHVAEIPYE 249 (304)
Q Consensus 224 ~l~~~~~~a~~~~~~~~~H~~E~~~~ 249 (304)
.+.++++.|++++..+.+|. ++.++
T Consensus 229 ~i~~aL~~A~~~dv~VaiHa-dtlne 253 (567)
T cd00375 229 AIDTCLSVADEYDVQVAIHT-DTLNE 253 (567)
T ss_pred HHHHHHHHHHhhCCEEEEEC-CCCCc
Confidence 99999999999999999996 44443
|
Nickel-dependent ureases are found in bacteria, fungi and plants. Their primary role is to allow the use of external and internally generated urea as a nitrogen source. The enzyme consists of 3 subunits, alpha, beta and gamma, which can be fused and present on a single protein chain and which in turn forms multimers, mainly trimers. The large alpha subunit is the catalytic domain containing an active site with a bi-nickel center complexed by a carbamylated lysine. The beta and gamma subunits play a role in subunit association to form the higher order trimers. |
| >PRK13206 ureC urease subunit alpha; Reviewed | Back alignment and domain information |
|---|
Probab=99.67 E-value=6e-15 Score=135.80 Aligned_cols=179 Identities=19% Similarity=0.244 Sum_probs=107.1
Q ss_pred CCCCCCCCCC-CcccEEEEccEEEecCCCCceeeeeeEEEeCCEEEEecCChhhhh-------hhcCCCceEEeCCCCEe
Q 022028 7 GGGSSSGSLG-SSSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQ-------QFSQMADQIIDLQSQIL 78 (304)
Q Consensus 7 ~~~~~~~~~~-~~~~~li~~~~ii~~~~~~~~~~~~~I~I~~g~I~~i~~~~~~~~-------~~~~~~~~vID~~g~iv 78 (304)
|+++++.... ...+++|+|++|++.. .+ ..++|.|+||||++|++..++.. .+...+.++||++|++|
T Consensus 58 g~~~~~~~~~~~~~DlVI~Na~IiD~~---gi-~~adI~IkDGrIvaIG~~~~p~~~~gv~~~~~ig~~tevIDaeG~iV 133 (573)
T PRK13206 58 SMGQGRATRAEGAPDTVITGAVILDHW---GI-VKADVGIRDGRIVAIGKAGNPDIMDGVHPDLVIGPSTEIIAGNGRIL 133 (573)
T ss_pred ccCccCCCCCCCCCCEEEECeEEECCC---Ce-EEEEEEEECCEEEEEeCCCCccccccccccccCCCCCEEEECCCCEE
Confidence 4455444332 2456899999999743 33 45799999999999997532110 01112468999999999
Q ss_pred eccccccCccchhhhhhcccCCCCccccccccccCccCCCChHHHHHHHHHHHHHHHhcCcceeecCCCC----------
Q 022028 79 LPGFVNTHVHTSQQLAKGIADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQ---------- 148 (304)
Q Consensus 79 ~PG~ID~H~Hl~~s~~~g~~~~~~~~~~l~~~~~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~d~~~~---------- 148 (304)
+|||||+|+|+.. +.. ...++.+||||+++++..
T Consensus 134 ~PG~ID~HVH~~~----------------------------Pg~--------~~aALagGVTTvi~~G~gP~~~t~~~t~ 177 (573)
T PRK13206 134 TAGAIDCHVHFIC----------------------------PQI--------VDEALAAGITTLIGGGTGPAEGSKATTV 177 (573)
T ss_pred EeCEEeeeeccCC----------------------------chH--------HHHHHcCCeEEEEcCCCCccccCccccc
Confidence 9999999999732 111 145789999999985211
Q ss_pred -----CHHHHHHHHHHcCCeEEeecccccCCCCCCCCcccCChHHHHHHHHHHHHHHcCCCCCCeEEEEeeCcccCCCHH
Q 022028 149 -----HVSEMAKAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDR 223 (304)
Q Consensus 149 -----~~~~~~~~~~~~gir~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~e 223 (304)
....+.+.++...+...+ . +.+ ... . .+...++++ .+.-.+| .+..+..+++
T Consensus 178 t~g~~~l~~~~~aa~~~pvn~g~----~--g~g--~~~---~----~~~L~el~~----aGA~GfK----i~~d~g~t~~ 234 (573)
T PRK13206 178 TPGAWHLARMLEALDGWPVNVAL----L--GKG--NTV---S----AEALWEQLR----GGAGGFK----LHEDWGSTPA 234 (573)
T ss_pred ccchhHHHHHHHHhhcCceeEEE----e--cCc--CcC---C----HHHHHHHHH----CCCcEEe----ecCccCCCHH
Confidence 111233333322222211 0 110 000 0 112223322 2222233 2233568999
Q ss_pred HHHHHHHHHHHhCCeeeEEecCChhh
Q 022028 224 LLLETRDMAREFKTGIHMHVAEIPYE 249 (304)
Q Consensus 224 ~l~~~~~~a~~~~~~~~~H~~E~~~~ 249 (304)
.+.+++++|+++++++.+|. |+.++
T Consensus 235 ~i~~aL~~A~~~gv~V~iHa-dtlne 259 (573)
T PRK13206 235 AIDACLRVADAAGVQVALHS-DTLNE 259 (573)
T ss_pred HHHHHHHHHHHhCCEEEEEC-CCccc
Confidence 99999999999999999996 55554
|
|
| >PRK13207 ureC urease subunit alpha; Reviewed | Back alignment and domain information |
|---|
Probab=99.67 E-value=3.9e-15 Score=137.34 Aligned_cols=175 Identities=18% Similarity=0.234 Sum_probs=105.8
Q ss_pred CCCCCCCCC-CCcccEEEEccEEEecCCCCceeeeeeEEEeCCEEEEecCChhhhh-----hhcCCCceEEeCCCCEeec
Q 022028 7 GGGSSSGSL-GSSSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQ-----QFSQMADQIIDLQSQILLP 80 (304)
Q Consensus 7 ~~~~~~~~~-~~~~~~li~~~~ii~~~~~~~~~~~~~I~I~~g~I~~i~~~~~~~~-----~~~~~~~~vID~~g~iv~P 80 (304)
|+++++... ....+++|+|++|++.. .+ ..++|.|+||||++|++...+.. ..++.+.++||++|++|+|
T Consensus 54 ~~~~~~~~~~~~~mDlVI~Na~Vvd~~---gi-~~adI~I~dGrI~~IG~~~~p~~~~~v~~~~~~~~eVIDa~G~iV~P 129 (568)
T PRK13207 54 GMGQSQRARADGAVDTVITNALILDHW---GI-VKADIGIKDGRIVAIGKAGNPDIQDGVDIIIGPGTEVIAGEGLIVTA 129 (568)
T ss_pred ccCcCCCCCccccCCEEEECeEEECCC---Ce-EEEEEEEECCEEEEEeCCCCccccccccccCCCCCeEEECCCCEEEe
Confidence 445555543 22356899999999742 33 47899999999999987532110 0011356899999999999
Q ss_pred cccccCccchhhhhhcccCCCCccccccccccCccCCCChHHHHHHHHHHHHHHHhcCcceeecCCCC-----C------
Q 022028 81 GFVNTHVHTSQQLAKGIADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQ-----H------ 149 (304)
Q Consensus 81 G~ID~H~Hl~~s~~~g~~~~~~~~~~l~~~~~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~d~~~~-----~------ 149 (304)
||||+|+|+.. +.. ...++.+||||+++++.. .
T Consensus 130 G~ID~HvH~~~----------------------------P~~--------~~aALagGVTTVi~mg~gP~~gt~~~t~tp 173 (568)
T PRK13207 130 GGIDTHIHFIC----------------------------PQQ--------IEEALASGVTTMIGGGTGPATGTNATTCTP 173 (568)
T ss_pred CeEECccCCcc----------------------------ccH--------HHHHHcCCCCEEEcCCcCCccCCccccccc
Confidence 99999999743 111 145789999999986311 0
Q ss_pred ----HHHHHHHHHHcCCeEEeecccccCCCCCCCCcccCChHHHHHHHHHHHHHHcCCCCCCeEEEEeeCcccCCCHHHH
Q 022028 150 ----VSEMAKAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLL 225 (304)
Q Consensus 150 ----~~~~~~~~~~~gir~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~e~l 225 (304)
...+.+.++...+...+ ...+ + ...++..+++++. +...+|+. ..+..+++.+
T Consensus 174 G~~~l~~~l~~a~~~pin~g~----~g~g------~-----~~~~~~L~e~i~a----GA~gfKi~----~d~g~t~~~l 230 (568)
T PRK13207 174 GPWHIHRMLQAADAFPMNIGF----LGKG------N-----ASLPEALEEQIEA----GAIGLKLH----EDWGATPAAI 230 (568)
T ss_pred chHHHHHHHHHhhcCCceEEE----EcCC------C-----cccHHHHHHHHHc----CCCEEeec----CCCCCCHHHH
Confidence 12222332322222111 0001 0 0112233333322 22233322 2345688999
Q ss_pred HHHHHHHHHhCCeeeEEec
Q 022028 226 LETRDMAREFKTGIHMHVA 244 (304)
Q Consensus 226 ~~~~~~a~~~~~~~~~H~~ 244 (304)
.++++.|+++++++.+|+.
T Consensus 231 ~~aL~~A~~~gv~V~iHa~ 249 (568)
T PRK13207 231 DNCLSVADEYDVQVAIHTD 249 (568)
T ss_pred HHHHHHHHHhCCEEEEeCC
Confidence 9999999999999999973
|
|
| >PRK06886 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=99.66 E-value=2.9e-15 Score=131.32 Aligned_cols=197 Identities=16% Similarity=0.109 Sum_probs=125.1
Q ss_pred cccccCccchhhhhhccc-----CCCCccccccccccCccCCCChHHHHHHHHHHHHHHHhcCcceeecCCC-------C
Q 022028 81 GFVNTHVHTSQQLAKGIA-----DDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGG-------Q 148 (304)
Q Consensus 81 G~ID~H~Hl~~s~~~g~~-----~~~~~~~~l~~~~~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~d~~~-------~ 148 (304)
||||.|+|++.+..-+.. ...++.+.+.. .......++.++++.++..++..++..|+|.++.+-. .
T Consensus 21 gfv~~H~HlDk~~~~~~~~~~~~~~g~l~e~i~~-~~~~k~~~t~~dv~~Ra~~~l~~~~~~Gtt~iRtHvdvd~~~~l~ 99 (329)
T PRK06886 21 GWVNAHAHADRAFTMTPEKIAIYHYANLQQKWDL-VDEVKRNSTVEDYYARFSQAIELMISQGVTAFGTFVDIDPICEDR 99 (329)
T ss_pred CCccccccccccccCCCccccccCCCCHHHHHHH-HHHHhccCCHHHHHHHHHHHHHHHHHcCcccEeeeeccCCCcccc
Confidence 899999999997754431 23455443321 1123456789999999999999999999999975431 2
Q ss_pred CHHHHHHHHHHcCCeEEeecccc-cCCCCCCCCcccCChHHHHHHHHHHHHHHcCCCCCCeEEEEeeCc---ccCCCHHH
Q 022028 149 HVSEMAKAVELLGLRACLVQSTM-DCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQ---IMNATDRL 224 (304)
Q Consensus 149 ~~~~~~~~~~~~gir~~~~~~~~-d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~---~~~~~~e~ 224 (304)
..+.+.++.++..-+.-+....+ .+| + ..... ++++++.... .+.+. ++ |+. ....+++.
T Consensus 100 ~~~a~~~~r~~~~~~idlq~vafPq~g--~----~~~~~-------~~l~~~al~~-advvG-Gi-P~~~~~~~~~~~e~ 163 (329)
T PRK06886 100 AIIAAHKAREVYKHDIILKFANQTLKG--V----IEPTA-------KKWFDIGSEM-VDMIG-GL-PYRDELDYGRGLEA 163 (329)
T ss_pred HHHHHHHHHHHhcCcceEEEEecChhh--c----cCccH-------HHHHHHHHHh-CCEEe-Cc-cCCcCCCCCCCHHH
Confidence 24455555555544332221111 011 1 11111 1222222111 13332 22 443 23678899
Q ss_pred HHHHHHHHHHhCCeeeEEecCChhhHHHHHHhcCCCCCHHHHHHHhCCCCCCeeEEEeccCCcch-------hc------
Q 022028 225 LLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTE-------VN------ 291 (304)
Q Consensus 225 l~~~~~~a~~~~~~~~~H~~E~~~~~~~~~~~~g~~~~~~~~l~~~g~l~~~~~~~H~~~l~~~d-------i~------ 291 (304)
++.++++|+++|+++++|++|+.++.....+.+ .+...+.|+++ +++++||++|++.| ++
T Consensus 164 l~~~~~lA~~~g~~Id~Hlde~~~~~~~~le~l------~~~~~~~Gl~g-rV~~sH~~~L~~~~~~~~~~~i~~La~ag 236 (329)
T PRK06886 164 MDILLDTAKSLGKMVHVHVDQFNTPKEKETEQL------CDKTIEHGMQG-RVVAIHGISIGAHSKEYRYRLYQKMREAD 236 (329)
T ss_pred HHHHHHHHHHcCCCeEEeECCCCchhHHHHHHH------HHHHHHcCCCC-CEEEEEeccccCcChhhHHHHHHHHHHcC
Confidence 999999999999999999999887665544432 23334789976 79999999999887 43
Q ss_pred -----cccccccccc
Q 022028 292 -----CTFGNFKYAV 301 (304)
Q Consensus 292 -----~p~sN~~l~~ 301 (304)
||.||++|+.
T Consensus 237 i~Vv~~P~snl~l~~ 251 (329)
T PRK06886 237 MMVIACPMAWIDSNR 251 (329)
T ss_pred CeEEECchhhhhhcc
Confidence 9999987654
|
|
| >PRK11170 nagA N-acetylglucosamine-6-phosphate deacetylase; Provisional | Back alignment and domain information |
|---|
Probab=99.64 E-value=2.1e-14 Score=129.08 Aligned_cols=197 Identities=16% Similarity=0.087 Sum_probs=119.2
Q ss_pred EEEEccEEEecCCCCceeeeeeEEEeCCEEEEecCChhhhhhhcCCCceEEeCCCCEeeccccccCccchhhhhhcccCC
Q 022028 21 MILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIADD 100 (304)
Q Consensus 21 ~li~~~~ii~~~~~~~~~~~~~I~I~~g~I~~i~~~~~~~~~~~~~~~~vID~~g~iv~PG~ID~H~Hl~~s~~~g~~~~ 100 (304)
++|+|++|++.+ +++.+++|+|+||||++|++..+. + .+.++||++|++|+|||||+|+|....
T Consensus 2 ~~i~n~~i~~~~---~~~~~~~v~IedgkI~~I~~~~~~----~-~~~~~ID~~G~~l~PG~ID~HvHG~~g-------- 65 (382)
T PRK11170 2 YALTNGRIYTGH---EVLDDHAVVIADGLIEAVCPVAEL----P-PGIEQRDLNGAILSPGFIDLQLNGCGG-------- 65 (382)
T ss_pred EEEEeeEEECCC---CeEeCCEEEEECCEEEEecCCccC----C-CCCeEEeCCCCEEccceeeeeecCccC--------
Confidence 678999999865 567788999999999999875431 1 244799999999999999999998541
Q ss_pred CCccccccccccCccCCCChHHHHHHHHHHHHHHHhcCcceeecCCCC-CHHH---HHHHHHHc---CCeEEeecccccC
Q 022028 101 VDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQ-HVSE---MAKAVELL---GLRACLVQSTMDC 173 (304)
Q Consensus 101 ~~~~~~l~~~~~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~d~~~~-~~~~---~~~~~~~~---gir~~~~~~~~d~ 173 (304)
..+. ......+.+. .+.....+++.|||+++..... ..+. .++...+. +-...++ +.-+
T Consensus 66 ~~~~--------~~~~~~~~~~----l~~~~~~~~~~GvTt~lpT~it~~~~~~~~~l~~~~~~~~~~~a~~~G--~HlE 131 (382)
T PRK11170 66 VQFN--------DTAEAISVET----LEIMQKANEKSGCTSFLPTLITSSDELMKQAVRVMREYLAKHPNQALG--LHLE 131 (382)
T ss_pred cccc--------cCccCCCHHH----HHHHHHHHHhcCEeEEeeeccCCCHHHHHHHHHHHHHHHhcCCCeEEE--EEee
Confidence 1110 0000112222 2233344789999999876421 1222 22222211 1011122 2227
Q ss_pred CCCCCCCcccCChHHHHH-HHHHHHHHHcCCCCCCeE-EEEeeCcccCCCHHHHHHHHHHHHHhCCeeeEEecCChhhHH
Q 022028 174 GEGLPASWAVRTTDDCIQ-SQKELYAKHHHAADGRIR-IWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQ 251 (304)
Q Consensus 174 g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~i~-~~~~~~~~~~~~~e~l~~~~~~a~~~~~~~~~H~~E~~~~~~ 251 (304)
||++++.+.+.+.+++++ -..+.++.+.+.. +.++ +.++|. .. . . ++.+.+.++|+.+.+ .++....+
T Consensus 132 GPfi~~~~~Gah~~~~~~~p~~~~~~~~~~~~-~~i~~iTlAPE-~~--~---~-~~i~~l~~~gi~vs~--GHs~A~~~ 201 (382)
T PRK11170 132 GPYLNLVKKGTHNPEFIRKPDAEMVDFLCENA-DVITKVTLAPE-MV--D---A-EVIRKLVEAGIVVSA--GHSNATYE 201 (382)
T ss_pred cCCCCcccCCCCCHHHhcCcCHHHHHHHHhcc-CCEEEEEECCC-CC--c---H-HHHHHHHHCCcEEEe--eCCcCCHH
Confidence 898999998888888877 3445666666544 4454 445553 11 1 2 456667777877654 45555566
Q ss_pred HHHHhc
Q 022028 252 VVMDTR 257 (304)
Q Consensus 252 ~~~~~~ 257 (304)
++.+.+
T Consensus 202 ~~~~a~ 207 (382)
T PRK11170 202 EAKAGF 207 (382)
T ss_pred HHHHHH
Confidence 555543
|
|
| >PRK07575 dihydroorotase; Provisional | Back alignment and domain information |
|---|
Probab=99.64 E-value=3.6e-15 Score=137.10 Aligned_cols=95 Identities=27% Similarity=0.416 Sum_probs=68.9
Q ss_pred cccEEEEccEEEecCCCCceeeeeeEEEeCCEEEEecCChhhhhhhcCCCceEEeCCCCEeeccccccCccchhhhhhcc
Q 022028 18 SSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGI 97 (304)
Q Consensus 18 ~~~~li~~~~ii~~~~~~~~~~~~~I~I~~g~I~~i~~~~~~~~~~~~~~~~vID~~g~iv~PG~ID~H~Hl~~s~~~g~ 97 (304)
|.+++|+|++|++.+ .....++|.|+||||.+|++..+. +.+.++||++|++|+|||||+|+|+... +
T Consensus 2 ~~~~~i~~~~i~~~~---~~~~~~~I~I~dg~I~~ig~~~~~-----~~~~~vid~~g~~v~PG~ID~H~H~~~~---~- 69 (438)
T PRK07575 2 MMSLLIRNARILLPS---GELLLGDVLVEDGKIVAIAPEISA-----TAVDTVIDAEGLTLLPGVIDPQVHFREP---G- 69 (438)
T ss_pred cceEEEECCEEECCC---CCEEeeeEEEECCEEEEecCCCCC-----CCCCeEEECCCCEEcccEEEeeeccCCC---C-
Confidence 446789999999854 223568999999999999875321 1135899999999999999999996421 0
Q ss_pred cCCCCccccccccccCccCCCChHHHHHHHHHHHHHHHhcCcceeecCCC
Q 022028 98 ADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGG 147 (304)
Q Consensus 98 ~~~~~~~~~l~~~~~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~d~~~ 147 (304)
.-+.|+++..++ .++++||||++|+..
T Consensus 70 -------------------~~~~e~~~~~~~----aa~~gGvTt~~dmp~ 96 (438)
T PRK07575 70 -------------------LEHKEDLFTASR----ACAKGGVTSFLEMPN 96 (438)
T ss_pred -------------------CcCcchHHHHHH----HHHhCCEEEEEECCC
Confidence 012345555444 358999999999753
|
|
| >cd01307 Met_dep_hydrolase_B Metallo-dependent hydrolases, subgroup B is part of the superfamily of metallo-dependent hydrolases, a large group of proteins that show conservation in their 3-dimensional fold (TIM barrel) and in details of their active site | Back alignment and domain information |
|---|
Probab=99.64 E-value=6.8e-15 Score=131.06 Aligned_cols=192 Identities=17% Similarity=0.156 Sum_probs=107.0
Q ss_pred eEEEeCCEEEEecCChhhhhhhcCCCceEEeCCCCEeeccccccCccchhhhhhcccCCCCccccccccccCccCCCChH
Q 022028 42 GVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIADDVDLMTWLHDRIWPYESNMTEE 121 (304)
Q Consensus 42 ~I~I~~g~I~~i~~~~~~~~~~~~~~~~vID~~g~iv~PG~ID~H~Hl~~s~~~g~~~~~~~~~~l~~~~~~~~~~~~~e 121 (304)
+|+|+||||++|++.... +.+.++||++|++|+|||||+|+|+...... ...+
T Consensus 1 ~i~i~~g~I~~i~~~~~~-----~~~~~~id~~g~~v~PG~iD~H~H~~~~g~~--------------------~~~~-- 53 (338)
T cd01307 1 DVAIENGKIAAVGAALAA-----PAATQIVDAGGCYVSPGWIDLHVHVYQGGTR--------------------YGDR-- 53 (338)
T ss_pred CEEEECCEEEEccCCCCC-----CCCCeEEECCCCEEecCeEEeeecCCCCCcc--------------------cCCC--
Confidence 589999999999985431 1246899999999999999999999653210 0001
Q ss_pred HHHHHHHHHHHHHHhcCcceeecCCCC---CHHHHHHHH-HHcCCeEEeecccccCCCCCCCCcccCChHH-HHHHHHHH
Q 022028 122 DSYISTLLCGIELIHSGVTCFAEAGGQ---HVSEMAKAV-ELLGLRACLVQSTMDCGEGLPASWAVRTTDD-CIQSQKEL 196 (304)
Q Consensus 122 ~~~~~~~~~~~~~l~~GvTtv~d~~~~---~~~~~~~~~-~~~gir~~~~~~~~d~g~~~~~~~~~~~~~~-~~~~~~~~ 196 (304)
....++..|+||++|+... ......+.. ...+.+......+.-.|...++.+. .... ..+...+.
T Consensus 54 --------~~~~a~~~GvTtvvd~~~~~~~~~~~~~~~~~~~~~~~v~a~~~~~~~g~~~~~~~~--~~~~~~~~~l~~~ 123 (338)
T cd01307 54 --------PDMIGVKSGVTTVVDAGSAGADNIDGFRYTVIERSATRVYAFLNISRVGLVAQDELP--DPDNIDEDAVVAA 123 (338)
T ss_pred --------HhHHHHcCceeEEEeCCCCCCCCHHHHHHHHHHhhhceEEEEEeeeccccccccccC--ChhHCCHHHHHHH
Confidence 1123688999999987632 223323333 3444432221111111111111111 1111 11222233
Q ss_pred HHHHcCCCCCCeEEEEeeCcccCCCHHHHHHHHHHHHHhCCeeeEEecCChhhHHHHHHhcCCCCCHHHHHHHhCCCCCC
Q 022028 197 YAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNN 276 (304)
Q Consensus 197 ~~~~~~~~~~~i~~~~~~~~~~~~~~e~l~~~~~~a~~~~~~~~~H~~E~~~~~~~~~~~~g~~~~~~~~l~~~g~l~~~ 276 (304)
+++... +-..+++++..+.......+.+++..+++++.|+++.+|+.+...+.+.+.+ ++.+.
T Consensus 124 ~~e~~~-gi~gik~~~~~~~~~~~~~~~l~~~~~~a~~~~~pi~vH~~~~~~~~~~~~~----------------~l~~g 186 (338)
T cd01307 124 AREYPD-VIVGLKARASKSVVGEWGIKPLELAKKIAKEADLPLMVHIGSPPPILDEVVP----------------LLRRG 186 (338)
T ss_pred HHHCcC-cEEEEEEEeecccccccCCcHHHHHHHHHHHcCCCEEEEeCCCCCCHHHHHH----------------HhcCC
Confidence 322221 1112566555444332233338889999999999999999776654332221 13444
Q ss_pred eeEEEeccCCc
Q 022028 277 LLSAHTVWVNH 287 (304)
Q Consensus 277 ~~~~H~~~l~~ 287 (304)
..+.||++.+.
T Consensus 187 ~~~~H~~~g~~ 197 (338)
T cd01307 187 DVLTHCFNGKP 197 (338)
T ss_pred CEEEeccCCCC
Confidence 57999999765
|
The vast majority of the members have a conserved metal binding site, involving four histidines and one aspartic acid residue. In the common reaction mechanism, the metal ion (or ions) deprotonate a water molecule for a nucleophilic attack on the substrate. The function of this subgroup is unknown. |
| >COG1574 Predicted metal-dependent hydrolase with the TIM-barrel fold [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.64 E-value=3.8e-14 Score=130.85 Aligned_cols=72 Identities=35% Similarity=0.582 Sum_probs=60.7
Q ss_pred CCcccEEEEccEEEecCCCCceeeeeeEEEeCCEEEEecCChhhhhhhcCCCceEEeCCCCEeeccccccCccch
Q 022028 16 GSSSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTS 90 (304)
Q Consensus 16 ~~~~~~li~~~~ii~~~~~~~~~~~~~I~I~~g~I~~i~~~~~~~~~~~~~~~~vID~~g~iv~PG~ID~H~Hl~ 90 (304)
+|+.++++.|++|+|++.+... ...|.|+||||++||+..+....+. ...++||++|++|+|||||+|.|+.
T Consensus 2 ~~~adlil~nG~i~T~~~~~p~--aeAvaI~dGrI~avG~~~~~~~~~~-~~t~viDL~Gk~v~PGfvDaH~Hl~ 73 (535)
T COG1574 2 AMAADLILHNGRIYTMDEARPT--AEAVAIKDGRIVAVGSDAELKALAG-PATEVIDLKGKFVLPGFVDAHLHLI 73 (535)
T ss_pred CcccceeEECCEEEeccCCCcc--eeEEEEcCCEEEEEcChHHHHhhcC-CCceEEeCCCCEeccccchhhHHHH
Confidence 3567899999999999865333 4589999999999999877665443 4789999999999999999999995
|
|
| >COG1820 NagA N-acetylglucosamine-6-phosphate deacetylase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.61 E-value=2.8e-14 Score=124.44 Aligned_cols=195 Identities=20% Similarity=0.225 Sum_probs=123.0
Q ss_pred EEEEccEEEecCCCCceeeeeeEEEeCCEEEEecCChhhhhhhcCCCceEEeCCCCEeeccccccCccchhhhhhcccCC
Q 022028 21 MILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIADD 100 (304)
Q Consensus 21 ~li~~~~ii~~~~~~~~~~~~~I~I~~g~I~~i~~~~~~~~~~~~~~~~vID~~g~iv~PG~ID~H~Hl~~s~~~g~~~~ 100 (304)
..++|++|++.. .++.++.|.|+||+|.+|.+.. . +.+.++||.+|.+++|||||+|+|.+...
T Consensus 2 ~~~~~~~i~t~~---~~~~~~~v~i~dg~I~~i~~~~-~-----p~~~e~id~~G~~l~PGfID~hihG~gG~------- 65 (380)
T COG1820 2 YALKNGRIFTGH---GVLDGGAVVIEDGKIEAVVPAE-L-----PADAEIIDLKGALLVPGFIDLHIHGGGGA------- 65 (380)
T ss_pred ceeeccEEEcCc---ceEECcEEEEcCCEEEEEecCc-C-----CCcceeecCCCCEecccEEEEeecCcCcc-------
Confidence 468999999854 7888999999999999999822 1 24679999999999999999999997632
Q ss_pred CCccccccccccCccCCCChHHHHHHHHHHHHHHHhcCcceeecCC-CCCHHH---HHHHH---HHcCCeEEeecccccC
Q 022028 101 VDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAG-GQHVSE---MAKAV---ELLGLRACLVQSTMDC 173 (304)
Q Consensus 101 ~~~~~~l~~~~~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~d~~-~~~~~~---~~~~~---~~~gir~~~~~~~~d~ 173 (304)
.+.+ .-+.+. ...-....++.|||++.-.. ....+. .++++ ...+...++|..+ +
T Consensus 66 -~~~D-----------~~~~~~----l~~i~~~~~~~GtTsfLpT~iT~~~e~i~~al~~~~e~~~~~ga~ilGiHL--E 127 (380)
T COG1820 66 -DFMD-----------AGSVET----LETMAEAHLRHGTTSFLPTLITASLEKIKAALRAIREAIAKGGAQILGIHL--E 127 (380)
T ss_pred -cccC-----------ccCHHH----HHHHHHHhhhcCeeeeeeecccCCHHHHHHHHHHHHHHHhccCCceEEEEe--e
Confidence 1110 011222 22334557889999986422 122222 22221 1111111222222 8
Q ss_pred CCCCCCCcccCChHHHHH-HHHHHHHHHcCCCCCCeE-EEEeeCcccCCCHHHHHHHHHHHHHhCCeeeEEecCChhhHH
Q 022028 174 GEGLPASWAVRTTDDCIQ-SQKELYAKHHHAADGRIR-IWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQ 251 (304)
Q Consensus 174 g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~i~-~~~~~~~~~~~~~e~l~~~~~~a~~~~~~~~~H~~E~~~~~~ 251 (304)
||++++...++++++.++ ...+.+++|....++.++ +.++|... -+.|.++ .+.+.|+. +-+.++....+
T Consensus 128 GP~ls~~kkGAh~~~~ir~~~~~~~~~~~~~a~g~i~~vTlAPE~~--~~~e~i~----~l~~~gii--vs~GHS~Atye 199 (380)
T COG1820 128 GPFLSPEKKGAHNPEYIRPPDPEELEQLIAAADGLIKLVTLAPELD--GTKELIR----LLANAGIV--VSIGHSNATYE 199 (380)
T ss_pred cCccCHhhccCCCHHHhCCCCHHHHHHHHhhccCceEEEEECCCCC--CCHHHHH----HHHhCCeE--EEecCccccHH
Confidence 999999999999999987 566777888776666553 45555322 1444443 44445654 44566666666
Q ss_pred HHHHhc
Q 022028 252 VVMDTR 257 (304)
Q Consensus 252 ~~~~~~ 257 (304)
..++.+
T Consensus 200 ~~~~a~ 205 (380)
T COG1820 200 QARAAF 205 (380)
T ss_pred HHHHHH
Confidence 666644
|
|
| >PRK07627 dihydroorotase; Provisional | Back alignment and domain information |
|---|
Probab=99.61 E-value=9.3e-14 Score=127.01 Aligned_cols=65 Identities=23% Similarity=0.361 Sum_probs=52.4
Q ss_pred cEEEEccEEEecCCCCceeeeeeEEEeCCEEEEecCChhhhhhhcCCCceEEeCCCCEeeccccccCccchh
Q 022028 20 TMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQ 91 (304)
Q Consensus 20 ~~li~~~~ii~~~~~~~~~~~~~I~I~~g~I~~i~~~~~~~~~~~~~~~~vID~~g~iv~PG~ID~H~Hl~~ 91 (304)
+++|+|++|+++.. ....+++|+|+||||++|++.... ..+.++||++|++|+|||||+|+|+..
T Consensus 2 ~~~i~~~~v~~~~~--~~~~~~~I~I~~g~I~~i~~~~~~-----~~~~~~iDa~g~~vlPG~iD~H~H~~~ 66 (425)
T PRK07627 2 KIHIKGGRLIDPAA--GTDRQADLYVAAGKIAAIGQAPAG-----FNADKTIDASGLIVCPGLVDLSARLRE 66 (425)
T ss_pred eEEEEeeEEECCCC--CccceeEEEEECCEEEEecCCCcC-----CCCCeEEECCCCEEeccEEeccccccC
Confidence 47899999997653 234678999999999999875321 135689999999999999999999954
|
|
| >PRK09236 dihydroorotase; Reviewed | Back alignment and domain information |
|---|
Probab=99.59 E-value=4.7e-14 Score=130.04 Aligned_cols=65 Identities=31% Similarity=0.547 Sum_probs=51.3
Q ss_pred cccEEEEccEEEecCCCCceeeeeeEEEeCCEEEEecCChhhhhhhcCCCceEEeCCCCEeeccccccCccchh
Q 022028 18 SSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQ 91 (304)
Q Consensus 18 ~~~~li~~~~ii~~~~~~~~~~~~~I~I~~g~I~~i~~~~~~~~~~~~~~~~vID~~g~iv~PG~ID~H~Hl~~ 91 (304)
|++++|+|++|++.+ .+ ..++|+|+||+|++|++.... ..+.++||++|++|+|||||+|+|+..
T Consensus 1 ~~~~~i~~~~v~~~~---~~-~~~~i~i~~g~I~~i~~~~~~-----~~~~~~id~~g~~v~PG~ID~HvH~~~ 65 (444)
T PRK09236 1 MKRILIKNARIVNEG---KI-FEGDVLIENGRIAKIASSISA-----KSADTVIDAAGRYLLPGMIDDQVHFRE 65 (444)
T ss_pred CccEEEECCEEEcCC---Cc-eEeEEEEECCEEEEecCCCCC-----CCCCeEEECCCCEECCCEEEccccccc
Confidence 355789999999843 33 357899999999999865321 124589999999999999999999743
|
|
| >TIGR02318 phosphono_phnM phosphonate metabolism protein PhnM | Back alignment and domain information |
|---|
Probab=99.59 E-value=1.7e-13 Score=123.29 Aligned_cols=59 Identities=31% Similarity=0.521 Sum_probs=48.2
Q ss_pred EEEccEEEecCCCCceeeeeeEEEeCCEEEEecCChhhhhhhcCCCceEEeCCCCEeeccccccCccchh
Q 022028 22 ILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQ 91 (304)
Q Consensus 22 li~~~~ii~~~~~~~~~~~~~I~I~~g~I~~i~~~~~~~~~~~~~~~~vID~~g~iv~PG~ID~H~Hl~~ 91 (304)
+|+|++|++.+ .++. ++|.|+||||++|++... ...++||++|++|+|||||+|+|...
T Consensus 1 ~i~~~~vv~~~---~~~~-~~i~i~dg~I~~i~~~~~-------~~~~~iD~~G~~v~PGlID~H~h~~e 59 (376)
T TIGR02318 1 VLSNARLVLED---EVVE-GSVVIEDGAIADIGEGPV-------ALAEAIDGEGDLLLPGLIDLHTDNLE 59 (376)
T ss_pred CEeCeEEECCC---ceEe-eeEEEECCEEEEecCCCC-------CCCceEeCCCCEEeccEEEcccCccc
Confidence 48999999755 3554 499999999999987432 14568999999999999999999864
|
This family consists of proteins from in the PhnM family. PhnM is a a protein associated with phosphonate utilization in a number of bacterial species. In Pseudomonas stutzeri WM88, a protein that is part of a system for the oxidation of phosphites (another form of reduced phosphorous compound) scores between trusted and noise cutoffs. |
| >cd01300 YtcJ_like YtcJ_like metal dependent amidohydrolases | Back alignment and domain information |
|---|
Probab=99.59 E-value=2.6e-13 Score=126.55 Aligned_cols=73 Identities=14% Similarity=0.075 Sum_probs=56.0
Q ss_pred cCCCHHHHHHHHHHHHHhCCeeeEEecCChhhHHHHHHhcCCCCCHHHH-HHHhCCCCCCeeEEEeccCCcchhc-----
Q 022028 218 MNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTF-LDKIEFLQNNLLSAHTVWVNHTEVN----- 291 (304)
Q Consensus 218 ~~~~~e~l~~~~~~a~~~~~~~~~H~~E~~~~~~~~~~~~g~~~~~~~~-l~~~g~l~~~~~~~H~~~l~~~di~----- 291 (304)
..++++.++++++.|+++|+++++|+.+ ....+.+.+. ++. ..+.|+++.+..++||..+++++++
T Consensus 290 ~~~~~e~l~~~~~~a~~~g~~v~~Ha~g-d~~i~~~l~~-------~~~~~~~~g~~~~r~~i~H~~~~~~~~~~~l~~~ 361 (479)
T cd01300 290 LLISPEELEELVRAADEAGLQVAIHAIG-DRAVDTVLDA-------LEAALKDNPRADHRHRIEHAQLVSPDDIPRFAKL 361 (479)
T ss_pred ccCCHHHHHHHHHHHHHCCCCEEEEEec-HHHHHHHHHH-------HHHHHHhcCCCCCCceeeecccCCHHHHHHHHHc
Confidence 4578999999999999999999999864 4445544442 232 3345777888999999999999887
Q ss_pred ------ccccccc
Q 022028 292 ------CTFGNFK 298 (304)
Q Consensus 292 ------~p~sN~~ 298 (304)
||..+.+
T Consensus 362 gv~~~~~P~~~~~ 374 (479)
T cd01300 362 GVIASVQPNHLYS 374 (479)
T ss_pred CCceEeCcccccC
Confidence 7776654
|
YtcJ is a Bacillus subtilis ORF of unknown function. The Arabidopsis homolog LAF3 has been identified as a factor required for photochrome A signalling. |
| >PRK02382 dihydroorotase; Provisional | Back alignment and domain information |
|---|
Probab=99.58 E-value=3.2e-13 Score=124.52 Aligned_cols=177 Identities=18% Similarity=0.216 Sum_probs=102.5
Q ss_pred cccEEEEccEEEecCCCCceeeeeeEEEeCCEEEEecCChhhhhhhcCCCceEEeCCCCEeeccccccCccchhhhhhcc
Q 022028 18 SSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGI 97 (304)
Q Consensus 18 ~~~~li~~~~ii~~~~~~~~~~~~~I~I~~g~I~~i~~~~~~~~~~~~~~~~vID~~g~iv~PG~ID~H~Hl~~s~~~g~ 97 (304)
|.+++|+|++|++.+ . +.+++|+|+||||++|++..+. +.+.++||++|++|+|||||+|+|+.....
T Consensus 1 ~~dl~i~n~~v~~~~---~-~~~~~v~I~dg~I~~i~~~~~~-----~~~~~~id~~g~~v~PG~ID~H~H~~~~g~--- 68 (443)
T PRK02382 1 MRDALLKDGRVYYNN---S-LQPRDVRIDGGKITAVGKDLDG-----SSSEEVIDARGMLLLPGGIDVHVHFREPGY--- 68 (443)
T ss_pred CceEEEECCEEEeCC---C-ceEEEEEEECCEEEEecCCCCC-----CCCCeEEECCCCEEcCCEeeeeeeccCCCC---
Confidence 356899999999732 2 3578999999999999764321 124689999999999999999999754110
Q ss_pred cCCCCccccccccccCccCCCChHHHHHHHHHHHHHHHhcCcceeecCCCCC-----HHHHHHHHHHcCCeEEeeccccc
Q 022028 98 ADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQH-----VSEMAKAVELLGLRACLVQSTMD 172 (304)
Q Consensus 98 ~~~~~~~~~l~~~~~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~d~~~~~-----~~~~~~~~~~~gir~~~~~~~~d 172 (304)
...+++. .....++..||||++++.... .+.+....+...-+.++...+.
T Consensus 69 --------------------~~~e~~~----~~~~aa~~gGvTtv~~~~~t~p~~~~~~~~~~~~~~a~~~s~v~~~~~- 123 (443)
T PRK02382 69 --------------------THKETWY----TGSRSAAAGGVTTVVDQPNTDPPTVDGESFDEKAELAARKSIVDFGIN- 123 (443)
T ss_pred --------------------CchhhHH----HHHHHHHhCCcEEEEECCCCCCCCChHHHHHHHHHHhCcCceEEEEEE-
Confidence 0112222 223457889999999875321 1222222222222222211111
Q ss_pred CCCCCCCCcccCChHHHHHHHHHHHHHHcCCCCCCe-EEEEee-CcccCCCHHHHHHHHHHHHHhCCeeeEEecCCh
Q 022028 173 CGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRI-RIWFGI-RQIMNATDRLLLETRDMAREFKTGIHMHVAEIP 247 (304)
Q Consensus 173 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i-~~~~~~-~~~~~~~~e~l~~~~~~a~~~~~~~~~H~~E~~ 247 (304)
+. .. ..+++...+.+. +.-.+ +++... .+....+++.+.++++.+++.++++.+|+ |..
T Consensus 124 -~~--~~--------~~~~~l~~l~~~----gv~~~gkv~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~-e~~ 184 (443)
T PRK02382 124 -GG--VT--------GNWDPLESLWER----GVFALGEIFMADSTGGMGIDEELFEEALAEAARLGVLATVHA-EDE 184 (443)
T ss_pred -ee--ec--------cchhhHHHHHhc----CccceeEEEEEecCCCcccCHHHHHHHHHHHHhcCCeEEEec-CCH
Confidence 10 00 001122223221 11112 333322 12235577889999999999999999996 443
|
|
| >PRK07369 dihydroorotase; Provisional | Back alignment and domain information |
|---|
Probab=99.58 E-value=3.2e-13 Score=123.10 Aligned_cols=96 Identities=23% Similarity=0.185 Sum_probs=68.6
Q ss_pred cccEEEEccEEEecCCCCceeeeeeEEEeCCEEEEecCChhhhhhhcCCCceEEeCCCCEeeccccccCccchhhhhhcc
Q 022028 18 SSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGI 97 (304)
Q Consensus 18 ~~~~li~~~~ii~~~~~~~~~~~~~I~I~~g~I~~i~~~~~~~~~~~~~~~~vID~~g~iv~PG~ID~H~Hl~~s~~~g~ 97 (304)
|.+++|+|++|+++.. .....++|+|+||+|++|++.... ++.+.++||++|++|+|||||+|+|+....
T Consensus 1 ~~~~~i~n~~v~d~~~--~~~~~~~v~I~dg~I~~i~~~~~~----~~~~~~~iDa~G~~vlPG~ID~H~H~~~~~---- 70 (418)
T PRK07369 1 MSNELLQQVRVLDPVS--NTDRIADVLIEDGKIQAIEPHIDP----IPPDTQIIDASGLILGPGLVDLYSHSGEPG---- 70 (418)
T ss_pred CCCEEEeCeEEECCCC--CcccceeEEEECCEEEEecCCccc----CCCCCEEEECCCCEEecCEEecccccCCCC----
Confidence 5678899999996442 223678999999999999865321 113568999999999999999999974310
Q ss_pred cCCCCccccccccccCccCCCChHHHHHHHHHHHHHHHhcCcceeecCC
Q 022028 98 ADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAG 146 (304)
Q Consensus 98 ~~~~~~~~~l~~~~~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~d~~ 146 (304)
....+++... ...++..|+||+.++.
T Consensus 71 -------------------~~~~e~~~s~----~~aa~~GGvTtv~~~p 96 (418)
T PRK07369 71 -------------------FEERETLASL----AAAAAAGGFTRVAILP 96 (418)
T ss_pred -------------------cCCCccHHHH----HHHHHhCCceEEEECC
Confidence 0012233322 3457889999999875
|
|
| >PF01979 Amidohydro_1: Amidohydrolase family; InterPro: IPR006680 This group of enzymes represents a large metal dependent hydrolase superfamily [] | Back alignment and domain information |
|---|
Probab=99.58 E-value=9.7e-16 Score=136.09 Aligned_cols=198 Identities=20% Similarity=0.252 Sum_probs=127.1
Q ss_pred EeeccccccCccchhhhhhcccCCCCccccccccccCccCCCChHHHHHHHHHHHHHHHhcCcceeecCCC--CCHH---
Q 022028 77 ILLPGFVNTHVHTSQQLAKGIADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGG--QHVS--- 151 (304)
Q Consensus 77 iv~PG~ID~H~Hl~~s~~~g~~~~~~~~~~l~~~~~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~d~~~--~~~~--- 151 (304)
+|+|||||+|+|+..+..++. +++++.+...+.+..+++++||||++++.. ....
T Consensus 1 ~v~PGlID~H~H~~~~~~~~~--------------------~~~~~~~~~~~~~~~~~l~~GvTtv~~~~~~~~~~~~~~ 60 (333)
T PF01979_consen 1 YVMPGLIDAHVHGGQGGLRGL--------------------LDPEDHYESIRTGAKAALKGGVTTVLDTPHTSPNPDIEL 60 (333)
T ss_dssp EEEE-EEEEEEEGGGTTHTTS--------------------SSHHHHHHHHHHHHHHHHHTTEEEEEEEEESSHCHHHHH
T ss_pred CEEcChhHHhhCcCCcCcccc--------------------CCHHHHHHHHHHHHHHHHhcCeEEEEcCcccCCcccccc
Confidence 699999999999998766542 457788888899999999999999999831 2221
Q ss_pred --HHHHHH---HHcCCe-EEee-ccccc--CCCCCCCCcccCChHHH---HHHHHHHHHHHcCCCC--CCeEEEEeeCcc
Q 022028 152 --EMAKAV---ELLGLR-ACLV-QSTMD--CGEGLPASWAVRTTDDC---IQSQKELYAKHHHAAD--GRIRIWFGIRQI 217 (304)
Q Consensus 152 --~~~~~~---~~~gir-~~~~-~~~~d--~g~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~--~~i~~~~~~~~~ 217 (304)
...+.. ...... ..+. ..... .+...+.... ..... ..+..+.+..+..... ..+...+.+..+
T Consensus 61 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 138 (333)
T PF01979_consen 61 RNEIMEGLAAAPKIEPAMTLLGTGSVGGHGEGPNEPPDKN--GPHDEAFEGEDFIKFIEEAGSEIKRIDGVIPAISPHNP 138 (333)
T ss_dssp HHHHHHHHHHHHHHEEEEEEEEECECSEEEECHHHHHHHH--SEHHHHHHHHHHHHHHHHHTTTCEEEECEEEEEEHHTT
T ss_pred ccccccccccchhhhccccccccccccccccccccccccc--cCCchhhhHHHHHHHhhhhhhhhccccccccccccccc
Confidence 111111 111111 1110 00000 0000000000 00000 0112333333322211 144566777888
Q ss_pred cCCCHHHHHHHHHHHHH-----h-CCeeeEEecCChhhHHHHHHhcCCCCCHHHHHHHhCCC-----CCCeeEEEeccCC
Q 022028 218 MNATDRLLLETRDMARE-----F-KTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFL-----QNNLLSAHTVWVN 286 (304)
Q Consensus 218 ~~~~~e~l~~~~~~a~~-----~-~~~~~~H~~E~~~~~~~~~~~~g~~~~~~~~l~~~g~l-----~~~~~~~H~~~l~ 286 (304)
..++.+.++...+++++ . ++++++|+.|.....+.+.+.++. ++++++...+++ ++..++.||++++
T Consensus 139 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~ 216 (333)
T PF01979_consen 139 YTVSDEELREAVELAKEFLAAEKLGIPVHIHVAEGTGEVEAMTHLYGM--SPIEALDHLGLLEEAIDDGVDLIAHGTHLS 216 (333)
T ss_dssp TTSCHHHHHHHHHHHHHHHHHHHHTHEEEEEESSSHHHHCCCHHHHSH--HHHHHHHHHHSCHHHHHHHCEEEEEHTTSE
T ss_pred ccchhhhhhhHHhhhhhHHHHHhhcccceeeeccCcccceeEeeeeec--cchhhhccchhhhhhcccccceeeccccCC
Confidence 89999999999999999 4 999999999999887777777765 489999988998 7789999999999
Q ss_pred cchhc-----------ccccccc
Q 022028 287 HTEVN-----------CTFGNFK 298 (304)
Q Consensus 287 ~~di~-----------~p~sN~~ 298 (304)
++++. ||.+|..
T Consensus 217 ~~~~~~l~~~~~~~~~~~~~~~~ 239 (333)
T PF01979_consen 217 DEEIELLKETGIGIIHCPISNDS 239 (333)
T ss_dssp HHHHHHHHHHTHEEEEEHHHHHH
T ss_pred HHHhhhhhccCCccccccchhhh
Confidence 88774 7877776
|
The family includes adenine deaminase (3.5.4.2 from EC) that hydrolyses adenine to form hypoxanthine and ammonia. The adenine deaminase reaction is important for adenine utilization as a purine and also as a nitrogen source []. This family also includes dihydroorotase and N-acetylglucosamine-6-phosphate deacetylases (3.5.1.25 from EC). These enzymes catalyse the reaction: |
| >PRK06189 allantoinase; Provisional | Back alignment and domain information |
|---|
Probab=99.57 E-value=3e-13 Score=124.98 Aligned_cols=93 Identities=20% Similarity=0.279 Sum_probs=67.2
Q ss_pred CcccEEEEccEEEecCCCCceeeeeeEEEeCCEEEEecCChhhhhhhcCCCceEEeCCCCEeeccccccCccchhhhhhc
Q 022028 17 SSSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKG 96 (304)
Q Consensus 17 ~~~~~li~~~~ii~~~~~~~~~~~~~I~I~~g~I~~i~~~~~~~~~~~~~~~~vID~~g~iv~PG~ID~H~Hl~~s~~~g 96 (304)
|+.+++|+|++|++.+ .. ..++|+|+||+|.+|++..+ ..+.++||++|++|+|||||+|+|+....
T Consensus 1 ~~~~~~i~~~~v~~~~---~~-~~~~v~i~~G~I~~i~~~~~------~~~~~~iD~~g~~vlPG~ID~H~H~~~~~--- 67 (451)
T PRK06189 1 MMYDLIIRGGKVVTPE---GV-YRADIGIKNGKIAEIAPEIS------SPAREIIDADGLYVFPGMIDVHVHFNEPG--- 67 (451)
T ss_pred CCccEEEECCEEEcCC---Cc-EEEEEEEECCEEEEecCCCC------CCCCeEEECCCCEEecCEEEeeeccCCCC---
Confidence 3456899999999854 22 46899999999999986532 12467999999999999999999975410
Q ss_pred ccCCCCccccccccccCccCCCChHHHHHHHHHHHHHHHhcCcceeecCC
Q 022028 97 IADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAG 146 (304)
Q Consensus 97 ~~~~~~~~~~l~~~~~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~d~~ 146 (304)
. -..+++.. ....++..|+||++++.
T Consensus 68 ----~----------------~~~~~~~~----~~~aa~~gGvTt~~~~p 93 (451)
T PRK06189 68 ----R----------------THWEGFAT----GSAALAAGGCTTYFDMP 93 (451)
T ss_pred ----C----------------CCcccHHH----HHHHHHhCCEEEEEECC
Confidence 0 00122222 23457889999999874
|
|
| >PF13594 Amidohydro_5: Amidohydrolase; PDB: 4F0R_A 4F0S_A 1NFG_C 2FVM_A 2FVK_A 2FTY_D 1YBQ_B 1POJ_B 1ONW_A 2AQO_B | Back alignment and domain information |
|---|
Probab=99.57 E-value=5.1e-15 Score=99.79 Aligned_cols=44 Identities=27% Similarity=0.663 Sum_probs=34.3
Q ss_pred EEEeCCEEEEecCChhhhhhhcCCCceEEeCCCCEeeccccccCccch
Q 022028 43 VFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTS 90 (304)
Q Consensus 43 I~I~~g~I~~i~~~~~~~~~~~~~~~~vID~~g~iv~PG~ID~H~Hl~ 90 (304)
|+|+||||++|++..+. +..+.++||++|++|+|||||+|+|+.
T Consensus 1 V~I~~g~I~~v~~~~~~----~~~~~~viD~~g~~v~PG~ID~H~H~~ 44 (68)
T PF13594_consen 1 VLIEDGKIVAVGPDSEL----PADAAEVIDAKGKYVMPGFIDMHTHLG 44 (68)
T ss_dssp EEEETTEEEEEESSCCT----TSTCCEEEEETTCEEEE-EEEEEE-TT
T ss_pred CEEECCEEEEeCCCCCC----CCCCCEEEECCCCEEeCCeEeeeeccc
Confidence 78999999999654432 123568999999999999999999986
|
... |
| >PRK09059 dihydroorotase; Validated | Back alignment and domain information |
|---|
Probab=99.57 E-value=7.2e-13 Score=121.32 Aligned_cols=100 Identities=20% Similarity=0.223 Sum_probs=70.0
Q ss_pred CcccEEEEccEEEecCCCCceeeeeeEEEeCCEEEEecCChhhhhhhcCCCceEEeCCCCEeeccccccCccchhhhhhc
Q 022028 17 SSSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKG 96 (304)
Q Consensus 17 ~~~~~li~~~~ii~~~~~~~~~~~~~I~I~~g~I~~i~~~~~~~~~~~~~~~~vID~~g~iv~PG~ID~H~Hl~~s~~~g 96 (304)
|+..++|+|++|++.+. ....+++|+|+||||++|++..... ..+ .+.++||++|++|+|||||+|+|+....
T Consensus 1 ~~~~~~i~n~~v~~~~~--~~~~~~~v~I~~G~I~~i~~~~~~~-~~~-~~~~viDa~G~~v~PG~ID~HvH~~~~~--- 73 (429)
T PRK09059 1 MMRPILLANARIIDPSR--GLDEIGTVLIEDGVIVAAGKGAGNQ-GAP-EGAEIVDCAGKAVAPGLVDARVFVGEPG--- 73 (429)
T ss_pred CCcCEEEEeeEEECCCC--CcccceEEEEECCEEEEecCccccc-cCC-CCCeEEECCCCEEeccEEecccccCCCC---
Confidence 46778999999998653 3345789999999999998653210 011 2458999999999999999999984310
Q ss_pred ccCCCCccccccccccCccCCCChHHHHHHHHHHHHHHHhcCcceeecCCC
Q 022028 97 IADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGG 147 (304)
Q Consensus 97 ~~~~~~~~~~l~~~~~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~d~~~ 147 (304)
. ...+++ ......++..||||+.++..
T Consensus 74 -------~-------------~~~e~~----~~~s~aa~~gGvTtv~~~p~ 100 (429)
T PRK09059 74 -------A-------------EHRETI----ASASRAAAAGGVTSIIMMPD 100 (429)
T ss_pred -------c-------------hhhhhH----HHHHHHHHhCCcEEEEeccC
Confidence 0 001122 22334578899999998753
|
|
| >TIGR01178 ade adenine deaminase | Back alignment and domain information |
|---|
Probab=99.56 E-value=2.9e-13 Score=126.80 Aligned_cols=174 Identities=18% Similarity=0.267 Sum_probs=104.9
Q ss_pred cEEEEccEEEecCCCCceeeeeeEEEeCCEEEEecCChhhhhhhcCCCceEEeCCCCEeeccccccCccchhhhhhcccC
Q 022028 20 TMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIAD 99 (304)
Q Consensus 20 ~~li~~~~ii~~~~~~~~~~~~~I~I~~g~I~~i~~~~~~~~~~~~~~~~vID~~g~iv~PG~ID~H~Hl~~s~~~g~~~ 99 (304)
+++|+|++|++.... . ...++|.|+||||++|++.. +.++||++|++|+|||||+|+|+..+.
T Consensus 1 dlli~n~~ivd~~~~-~-~~~~dI~I~~g~I~~ig~~~---------~~~viDa~G~~v~PG~ID~H~Hi~~~~------ 63 (552)
T TIGR01178 1 DIVIKNAKIIDVYNG-E-IIPGDIAIANGHIAGVGKYN---------GVKVIDALGEYAVPGFIDAHIHIESSM------ 63 (552)
T ss_pred CEEEEeeEEEeCCCC-c-EEeeeEEEECCEEEEecCCC---------CCeEEECCCCEEEeCeEecccccCCCC------
Confidence 368999999975432 3 34679999999999997631 357999999999999999999996521
Q ss_pred CCCccccccccccCccCCCChHHHHHHHHHHHHHHHhcCcceeecCCCC--------CHHHHHHHHHHcCCeEEeecccc
Q 022028 100 DVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQ--------HVSEMAKAVELLGLRACLVQSTM 171 (304)
Q Consensus 100 ~~~~~~~l~~~~~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~d~~~~--------~~~~~~~~~~~~gir~~~~~~~~ 171 (304)
++++++. ..++..||||+++.... ..+.+.+.++...++.+...+.
T Consensus 64 ------------------~~~~~~~-------~~al~~GvTtvv~~P~~~~~v~g~~~~~~~~~~a~~~~~d~~~~~~s- 117 (552)
T TIGR01178 64 ------------------LTPSEFA-------KLVLPHGVTTVVSDPHEIANVNGEDGINFMLNNAKKTPLNFYFMLPS- 117 (552)
T ss_pred ------------------CChhHHH-------HHHHCCCEEEEEcCCCCCCCCCCHHHHHHHHHHhhcCCcEEEEECCC-
Confidence 1222221 23689999999974321 1233455555556665443321
Q ss_pred cCCCCCCCCcccCChHHHHHHHHHHHHHHcCCCCCC--eEEEEeeCcccCCCHHHHHHHHHHHHHhCCeeeEEecC
Q 022028 172 DCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGR--IRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAE 245 (304)
Q Consensus 172 d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--i~~~~~~~~~~~~~~e~l~~~~~~a~~~~~~~~~H~~E 245 (304)
..++.+.++.+.. -..++..++++. ++. ++..+...+.....++.++.+ +.+++.+..+..|+..
T Consensus 118 -~vp~~~~e~~g~~--~~~~~i~~~~~~-----~~V~glke~m~~~~v~~~d~~~l~~i-~~a~~~g~~I~gHap~ 184 (552)
T TIGR01178 118 -CVPALQFETSGAV--LTAEDIDELMEL-----DEVLGLAEVMDYPGVINADIEMLNKI-NSARKRNKVIDGHCPG 184 (552)
T ss_pred -CCCCCcccCCCCc--cCHHHHHHHHcC-----CCccEEEEEecchhhcCCCHHHHHHH-HHHHhCCCEEEecCCC
Confidence 1222221221110 012233333332 132 344443323334567777755 7889999999999743
|
The family described by this model includes an experimentally characterized adenine deaminase of Bacillus subtilis. It also include a member from Methanobacterium thermoautotrophicum, in which adenine deaminase activity has been detected. |
| >COG0044 PyrC Dihydroorotase and related cyclic amidohydrolases [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.55 E-value=7.6e-13 Score=120.00 Aligned_cols=174 Identities=18% Similarity=0.203 Sum_probs=105.0
Q ss_pred cEEEEccEEEecCCCCceeeeeeEEEeCCEEEEecCChhhhhhhcCCCceEEeCCCCEeeccccccCccchhhhhhcccC
Q 022028 20 TMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIAD 99 (304)
Q Consensus 20 ~~li~~~~ii~~~~~~~~~~~~~I~I~~g~I~~i~~~~~~~~~~~~~~~~vID~~g~iv~PG~ID~H~Hl~~s~~~g~~~ 99 (304)
+++|+|+++++++ ....++|.|+||+|++|++.... . .+.++||++|++|+|||||.|+|+....
T Consensus 2 ~~lIk~~~iv~~~----~~~~~di~i~~g~I~~Ig~~l~~----~-~~~~iiD~~g~~v~PG~ID~HVH~repg------ 66 (430)
T COG0044 2 DLLIKNARVVDPG----EDEVADILIKDGKIAAIGKNLEP----T-SGAEIIDAKGLLVLPGLVDLHVHFREPG------ 66 (430)
T ss_pred cEEEeccEEEcCC----CceEecEEEECCEEEEeccCCCC----C-CCCcEEECCCCEEccCeeEEEEecCCCC------
Confidence 4789999999852 23678999999999999987542 1 3678999999999999999999995411
Q ss_pred CCCccccccccccCccCCCChHHHHHHHHHHHHHHHhcCcceeecCCCCC-----HHHH---HHHHHHc-CCeEEeeccc
Q 022028 100 DVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQH-----VSEM---AKAVELL-GLRACLVQST 170 (304)
Q Consensus 100 ~~~~~~~l~~~~~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~d~~~~~-----~~~~---~~~~~~~-gir~~~~~~~ 170 (304)
. -..|++ ..+.+.++..|+|||+++.... .+.+ .+.++.. -++......+
T Consensus 67 ----~-------------~~ke~~----~tgs~AAa~GG~Ttv~dmPnt~P~~~~~~~~~~~~~~a~~~~~vd~~~~~~i 125 (430)
T COG0044 67 ----F-------------EHKETF----ETGSRAAAAGGVTTVVDMPNTKPPIDTAEALEDKLERAKGKSVVDYAFYGGL 125 (430)
T ss_pred ----c-------------chhhhH----HHHHHHHHcCCceEEEECCCCCCCCCCHHHHHHHHHHhhccceeEEEEEEEE
Confidence 0 012332 3344567899999999975421 1221 2222211 1122111111
Q ss_pred ccCCCCCCCCcccCChHHHHHHHHHHHHHHcCCCCCCeEEEEeeCcccCCCHHHHHHHHHHHHHhCCeeeEEecCChhhH
Q 022028 171 MDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYEN 250 (304)
Q Consensus 171 ~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~e~l~~~~~~a~~~~~~~~~H~~E~~~~~ 250 (304)
.. ... ...++.+... ..+ ++.+..-.. .......+++..+.++..+..+.+|+ |...-.
T Consensus 126 t~-------~~~---------~~~~~~~~~~--~~g-~~~F~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~H~-Ed~~~~ 184 (430)
T COG0044 126 TK-------GNL---------GKLELTERGV--EAG-FKGFMDDST-GALDDDVLEEALEYAAELGALILVHA-EDDDLI 184 (430)
T ss_pred ec-------ccc---------chhhhhhhhh--ccc-eEEEecCCc-CcCCHHHHHHHHHHHHhcCCeEEEec-CChhHh
Confidence 10 000 0011111111 012 233333322 34678889999999999999999995 766533
|
|
| >TIGR03583 EF_0837 probable amidohydrolase EF_0837/AHA_3915 | Back alignment and domain information |
|---|
Probab=99.53 E-value=7.9e-13 Score=119.07 Aligned_cols=186 Identities=14% Similarity=0.202 Sum_probs=100.7
Q ss_pred cEEEEccEEEecCCCCceeeeeeEEEeCCEEEEecCChhhhhhhcCCCceEEeCCC-CEeeccccccCccchhhhhhccc
Q 022028 20 TMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQS-QILLPGFVNTHVHTSQQLAKGIA 98 (304)
Q Consensus 20 ~~li~~~~ii~~~~~~~~~~~~~I~I~~g~I~~i~~~~~~~~~~~~~~~~vID~~g-~iv~PG~ID~H~Hl~~s~~~g~~ 98 (304)
+++|+|++|++.. ..+|.|+||||++|++..+. .+.++||++| ++|+|||||+|+|+....
T Consensus 2 ~~~i~n~~i~~~~-------~~~v~i~~g~I~~v~~~~~~------~~~~~iD~~g~~~l~PG~ID~H~H~~~~~----- 63 (365)
T TIGR03583 2 DLLIKNGRTVNGT-------PVDIAIEDGKIAAVGTTITG------SAKQTIDLEGETYVSAGWIDDHTHCFPKS----- 63 (365)
T ss_pred cEEEECcEEecCC-------eeEEEEECCEEEEecCCCCC------CCCeEEECCCCeEEecCEEEeeeccCCCc-----
Confidence 4789999999631 24899999999999764321 1458999999 999999999999985311
Q ss_pred CCCCccccccccccCccCCCChHHHHHHHHHHHHHHHhcCcceeecCCC---CCHHHHHHHHHHcCCeEEeecccccCCC
Q 022028 99 DDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGG---QHVSEMAKAVELLGLRACLVQSTMDCGE 175 (304)
Q Consensus 99 ~~~~~~~~l~~~~~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~d~~~---~~~~~~~~~~~~~gir~~~~~~~~d~g~ 175 (304)
.. + .++.. ...+..|||++.++.. ...+.+.+.++..+.+.+....+. ..
T Consensus 64 ---~~--~-------------~~~~~-------~~a~~~GvTt~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~--~~ 116 (365)
T TIGR03583 64 ---AL--Y-------------YDEPD-------EIGVKTGVTTVVDAGSTGADDIDDFYRLAQQAKTNVFALLNIS--RI 116 (365)
T ss_pred ---cc--c-------------cCCHh-------HhhhcCceeEEEeCCCCCCCCHHHHHHHHHhhCCcEEEEeeeh--hc
Confidence 00 0 00100 1136789999998542 334555555555554432211111 11
Q ss_pred CC-CCCcccCChHHHHHHHHHHHHHHcCCCCCCe---EEEEeeCcc--cCCCHHHHHHHHHHHHHhCCeeeEEecCChhh
Q 022028 176 GL-PASWAVRTTDDCIQSQKELYAKHHHAADGRI---RIWFGIRQI--MNATDRLLLETRDMAREFKTGIHMHVAEIPYE 249 (304)
Q Consensus 176 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i---~~~~~~~~~--~~~~~e~l~~~~~~a~~~~~~~~~H~~E~~~~ 249 (304)
|. ++...........++.+++++.+ .+.+ +..+++... ...++..+......+ +.++++.+|+.+...+
T Consensus 117 G~~~~~~~~~~~~~~~~~l~~~~~~~----~~~vv~~~~~~t~~~i~E~gl~~~~~~~~l~~~-~~~~pv~vH~~~a~~~ 191 (365)
T TIGR03583 117 GLVAQDELADLSNLDASAVKQAVERY----PDFIVGLKARMSKSVVGDNGIEPLEIAKQIQQE-NLELPLMVHIGSAPPE 191 (365)
T ss_pred cccChhhhhChHHhHHHHHHHHHHhC----cCcEEEEEEeecccccccCCcCHHHHHHHHHHh-cCCCcEEEEeCCCccC
Confidence 22 11110000111222333333332 2222 333443211 122244333333333 5789999999988766
Q ss_pred HHHHHH
Q 022028 250 NQVVMD 255 (304)
Q Consensus 250 ~~~~~~ 255 (304)
.+.+.+
T Consensus 192 ~~~i~~ 197 (365)
T TIGR03583 192 LDEILA 197 (365)
T ss_pred HHHHHH
Confidence 555444
|
Members of this family of relatively uncommon proteins are found in both Gram-positive (e.g. Enterococcus faecalis) and Gram-negative (e.g. Aeromonas hydrophila) bacteria, as part of a cluster of conserved proteins. These proteins resemble aminohydrolases (see pfam01979), including dihydroorotases. The function is unknown. |
| >cd01292 metallo-dependent_hydrolases Superfamily of metallo-dependent hydrolases (also called amidohydrolase superfamily) is a large group of proteins that show conservation in their 3-dimensional fold (TIM barrel) and in details of their active site | Back alignment and domain information |
|---|
Probab=99.51 E-value=6.5e-13 Score=114.09 Aligned_cols=186 Identities=21% Similarity=0.282 Sum_probs=125.9
Q ss_pred ccccCccchhhhhhcccCCCCccccccccccCccCCCChHHHHHHHHHHHHHHHhcCcceeecCCCC--------CHHHH
Q 022028 82 FVNTHVHTSQQLAKGIADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQ--------HVSEM 153 (304)
Q Consensus 82 ~ID~H~Hl~~s~~~g~~~~~~~~~~l~~~~~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~d~~~~--------~~~~~ 153 (304)
|||+|+|+..+.+++......+ .| ....++++.+......+.+++++||||+.++... ..+.+
T Consensus 1 ~ID~H~H~~~~~~~~~~~~~~~-~~--------~~~~~~~~~~~~~~~~~~~~~~~Gvttv~~~~~~~~~~~~~~~~~~~ 71 (275)
T cd01292 1 FIDTHVHLDGSALRGTRLNLEL-KE--------AEELSPEDLYEDTLRALEALLAGGVTTVVDMGSTPPPTTTKAAIEAV 71 (275)
T ss_pred CcccchhhHHHHHccCCCcccc-cc--------ccccCHHHHHHHHHHHHHHHHhcCceEEEeeEeecCccccchHHHHH
Confidence 7999999998877664422211 11 3567888999999999999999999999986532 23567
Q ss_pred HHHHHHc-CCeEEeecccccCCCCCCCCcccCChHHHHHHHHHHHHHHcCCCCCCeEEEEeeCcccCC---CHHHHHHHH
Q 022028 154 AKAVELL-GLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNA---TDRLLLETR 229 (304)
Q Consensus 154 ~~~~~~~-gir~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~---~~e~l~~~~ 229 (304)
.+++.+. |++.+......+.. ... .+.......+.++.+.. ....++.++..... +++.++.++
T Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~----~~~----~~~~~~~~~~~i~~~~~----~~~~gi~~~~~~~~~~~~~~~~~~~~ 139 (275)
T cd01292 72 AEAARASAGIRVVLGLGIPGVP----AAV----DEDAEALLLELLRRGLE----LGAVGLKLAGPYTATGLSDESLRRVL 139 (275)
T ss_pred HHHHHHhcCeeeEEeccCCCCc----ccc----chhHHHHHHHHHHHHHh----cCCeeEeeCCCCCCCCCCcHHHHHHH
Confidence 7888888 88887665544321 000 12223334444544432 12234555555444 788999999
Q ss_pred HHHHHhCCeeeEEecCChhhHHHHHHhcCCCCCHHHHHHHhCCCCCCeeEEEeccCCcchhc-----------ccccccc
Q 022028 230 DMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEVN-----------CTFGNFK 298 (304)
Q Consensus 230 ~~a~~~~~~~~~H~~E~~~~~~~~~~~~g~~~~~~~~l~~~g~l~~~~~~~H~~~l~~~di~-----------~p~sN~~ 298 (304)
++|+++++++.+|+.+...+ . ++++.+.+.+.++.++++.||.++++++++ ||.+|.+
T Consensus 140 ~~a~~~~~~i~~H~~~~~~~---------~--~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 208 (275)
T cd01292 140 EEARKLGLPVVIHAGELPDP---------T--RALEDLVALLRLGGRVVIGHVSHLDPELLELLKEAGVSLEVCPLSNYL 208 (275)
T ss_pred HHHHHcCCeEEEeeCCcccC---------c--cCHHHHHHHHhcCCCEEEECCccCCHHHHHHHHHcCCeEEECCccccc
Confidence 99999999999999887653 0 134444444434678999999999887776 8888876
Q ss_pred c
Q 022028 299 Y 299 (304)
Q Consensus 299 l 299 (304)
+
T Consensus 209 ~ 209 (275)
T cd01292 209 L 209 (275)
T ss_pred c
Confidence 5
|
The vast majority of the members have a conserved metal binding site, involving four histidines and one aspartic acid residue. In the common reaction mechanism, the metal ion (or ions) deprotonate a water molecule for a nucleophilic attack on the substrate. The family includes urease alpha, adenosine deaminase, phosphotriesterase dihydroorotases, allantoinases, hydantoinases, AMP-, adenine and cytosine deaminases, imidazolonepropionase, aryldialkylphosphatase, chlorohydrolases, formylmethanofuran dehydrogenases and others. |
| >PRK09358 adenosine deaminase; Provisional | Back alignment and domain information |
|---|
Probab=99.50 E-value=4.7e-13 Score=119.32 Aligned_cols=178 Identities=17% Similarity=0.121 Sum_probs=116.7
Q ss_pred hcccCCCCccccccccccCccCCCChHHHHHHHHHHHHHHHhcCccee---ecCCC-----CC--------HHHHHHHHH
Q 022028 95 KGIADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCF---AEAGG-----QH--------VSEMAKAVE 158 (304)
Q Consensus 95 ~g~~~~~~~~~~l~~~~~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv---~d~~~-----~~--------~~~~~~~~~ 158 (304)
|+..+..++.+|+....++.....++++++..++.++.++++.|||++ .+... .. .+.+.++..
T Consensus 51 r~~~~~~~l~~~l~~~~~~~~~~~t~ed~~~~~~~~~~e~~~~Gvty~E~~~~p~~~~~~gl~~~~~~~a~~~~~~~a~~ 130 (340)
T PRK09358 51 RAAYDFRDLQSFLDKYDAGVAVLQTEEDLRRLAFEYLEDAAADGVVYAEIRFDPQLHTERGLPLEEVVEAVLDGLRAAEA 130 (340)
T ss_pred cccccCCCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcCCEEEEEEeChhhhhhcCCCHHHHHHHHHHHHHHHHH
Confidence 444455678889988777777778999999999999999999999975 33221 00 223455566
Q ss_pred HcCCeEEeecccccCCCCCCCCcccCChHHHHHHHHHHHHHHcCCCCCCeEEEEeeCcc-cCCCHHHHHHHHHHHHHhCC
Q 022028 159 LLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQI-MNATDRLLLETRDMAREFKT 237 (304)
Q Consensus 159 ~~gir~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~~~~e~l~~~~~~a~~~~~ 237 (304)
+.|+|..+...++... ..+...+..+++++.+.. ++.+ ++.+.+. ...+++.++.++++|+++|+
T Consensus 131 ~~gi~~~li~~~~r~~----------~~~~~~~~~~~~~~~~~~--~~vv--g~~l~g~e~~~~~~~~~~~~~~A~~~g~ 196 (340)
T PRK09358 131 EFGISVRLILCFMRHF----------GEEAAARELEALAARYRD--DGVV--GFDLAGDELGFPPSKFARAFDRARDAGL 196 (340)
T ss_pred hcCceEEEEEEecCCC----------CHHHHHHHHHHHHHHhcC--CcEE--EEeCCCcCCCCCHHHHHHHHHHHHHCCC
Confidence 7799987765544311 122333334445544332 2333 4444333 34678899999999999999
Q ss_pred eeeEEecCChhhHHHHHHhcCCCCCHHHHHHHhCCCCCCeeEEEeccCCcch--hc-----------cccccccccc
Q 022028 238 GIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTE--VN-----------CTFGNFKYAV 301 (304)
Q Consensus 238 ~~~~H~~E~~~~~~~~~~~~g~~~~~~~~l~~~g~l~~~~~~~H~~~l~~~d--i~-----------~p~sN~~l~~ 301 (304)
++++|++|+....+. .+.+..+|. + -+.||+++++++ ++ ||.||.+++.
T Consensus 197 ~~~~H~~E~~~~~~~-----------~~al~~lg~---~-ri~Hg~~l~~~~~~~~~l~~~gi~v~~cP~Sn~~l~~ 258 (340)
T PRK09358 197 RLTAHAGEAGGPESI-----------WEALDELGA---E-RIGHGVRAIEDPALMARLADRRIPLEVCPTSNVQTGA 258 (340)
T ss_pred CeEEcCCCCCchhHH-----------HHHHHHcCC---c-ccchhhhhccCHHHHHHHHHcCCeEEECCCccccccc
Confidence 999999997643221 122222333 3 379999997554 44 9999999875
|
|
| >PRK09060 dihydroorotase; Validated | Back alignment and domain information |
|---|
Probab=99.49 E-value=5.4e-12 Score=116.30 Aligned_cols=93 Identities=25% Similarity=0.321 Sum_probs=67.0
Q ss_pred CcccEEEEccEEEecCCCCceeeeeeEEEeCCEEEEecCChhhhhhhcCCCceEEeCCCCEeeccccccCccchhhhhhc
Q 022028 17 SSSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKG 96 (304)
Q Consensus 17 ~~~~~li~~~~ii~~~~~~~~~~~~~I~I~~g~I~~i~~~~~~~~~~~~~~~~vID~~g~iv~PG~ID~H~Hl~~s~~~g 96 (304)
|..+++|+|++|++.+. . ..++|.|+||+|.+|++..+ ..+.++||++|++|+|||||+|+|+....
T Consensus 3 ~~~d~~i~~~~v~~~~~---~-~~~~i~i~~g~I~~i~~~~~------~~~~~~iD~~G~~v~PG~ID~HvH~~~~~--- 69 (444)
T PRK09060 3 QTFDLILKGGTVVNPDG---E-GRADIGIRDGRIAAIGDLSG------ASAGEVIDCRGLHVLPGVIDSQVHFREPG--- 69 (444)
T ss_pred CcCcEEEECCEEECCCC---C-eeeEEEEECCEEEEecCCCC------CCCceEEECCCCEEccCEEeccccccCCC---
Confidence 34568899999998542 2 35899999999999986432 12458999999999999999999974310
Q ss_pred ccCCCCccccccccccCccCCCChHHHHHHHHHHHHHHHhcCcceeecCC
Q 022028 97 IADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAG 146 (304)
Q Consensus 97 ~~~~~~~~~~l~~~~~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~d~~ 146 (304)
....+++.. ....++..||||++++.
T Consensus 70 --------------------~~~~e~~~t----~~~aa~~gGvTtv~~~p 95 (444)
T PRK09060 70 --------------------LEHKEDLET----GSRAAVLGGVTAVFEMP 95 (444)
T ss_pred --------------------CCccchHHH----HHHHHHhCCcEEEEECC
Confidence 001233333 23356899999999875
|
|
| >COG1001 AdeC Adenine deaminase [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.48 E-value=8.6e-13 Score=120.11 Aligned_cols=181 Identities=17% Similarity=0.272 Sum_probs=111.5
Q ss_pred cccEEEEccEEEecCCCCceeeeeeEEEeCCEEEEe-cCChhhhhhhcCCCceEEeCCCCEeeccccccCccchhhhhhc
Q 022028 18 SSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAI-GQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKG 96 (304)
Q Consensus 18 ~~~~li~~~~ii~~~~~~~~~~~~~I~I~~g~I~~i-~~~~~~~~~~~~~~~~vID~~g~iv~PG~ID~H~Hl~~s~~~g 96 (304)
..+++++|+++++.-. +-+-.++|.|.+|||+.| ++.. .++.++||+.|++|.|||||+|.|+..|
T Consensus 23 ~adlv~~ng~ivdv~~--gei~~~dIaI~~grI~~v~~~~~-------~e~~~~iDa~g~yivPGfID~H~HIESS---- 89 (584)
T COG1001 23 KADLVLKNGRIVDVVT--GEIYKGDIAIAGGRIVGVIGEYR-------AEATEVIDAAGRYIVPGFIDAHLHIESS---- 89 (584)
T ss_pred CCCEEEECCEEEEeee--ccEEeeeEEEECCEEEEeecCcC-------cccceeecCCCCEeccceeecceecccc----
Confidence 4678999999998653 334577999999999995 4432 1367999999999999999999999663
Q ss_pred ccCCCCccccccccccCccCCCChHHHHHHHHHHHHHHHhcCcceee-cCCC-------CCHHHHHHHHHHcCCeEEeec
Q 022028 97 IADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFA-EAGG-------QHVSEMAKAVELLGLRACLVQ 168 (304)
Q Consensus 97 ~~~~~~~~~~l~~~~~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~-d~~~-------~~~~~~~~~~~~~gir~~~~~ 168 (304)
.++|.++. +..+..||||+. |... ....-+++.++...++.++..
T Consensus 90 --------------------m~tP~~FA-------~~Vlp~GtTtvV~DPHEIaNV~G~~Gi~~ml~~a~~~pl~~~~~~ 142 (584)
T COG1001 90 --------------------MLTPSEFA-------RAVLPHGTTTVVSDPHEIANVLGEDGIRFMLDEAKETPLKVYVML 142 (584)
T ss_pred --------------------ccCHHHHH-------HHhhccCceEEeeCcHHHHhhccHHHHHHHHHHHhhCCeEEEEec
Confidence 34554433 336789999986 3221 124457788888888887654
Q ss_pred ccccCCCCCCCCcccCChHHHHHHHHHHHHHHcCCCCCCeEEEEeeCcccCCCHHHHHHHHHHHHHhCCeeeEEecCC
Q 022028 169 STMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEI 246 (304)
Q Consensus 169 ~~~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~e~l~~~~~~a~~~~~~~~~H~~E~ 246 (304)
+.. -|..+-+..+ ..-..++.+++++ |... -.+.-.+...+...-.++.+. ..+.+++.|+++.-|+.--
T Consensus 143 pSc--VPat~~Et~G--a~l~a~~i~e~~~-~p~V--igl~E~Mn~pgVi~~D~~~l~-kl~a~~~~~k~VdGHapgl 212 (584)
T COG1001 143 PSC--VPATPFETSG--AELTAEDIKELLE-HPEV--IGLGEMMNFPGVIEGDPDMLA-KLEAARKAGKPVDGHAPGL 212 (584)
T ss_pred ccC--ccCCccccCC--ceecHHHHHHHhh-CCCc--cchhhhcCCchhccCCHHHHH-HHHHHHHcCCeecccCCCC
Confidence 321 1111111111 1111122233332 2111 001112222334455666665 7788999999999997543
|
|
| >cd01320 ADA Adenosine deaminase (ADA) is a monomeric zinc dependent enzyme which catalyzes the irreversible hydrolytic deamination of both adenosine, as well as desoxyadenosine, to ammonia and inosine or desoxyinosine, respectively | Back alignment and domain information |
|---|
Probab=99.46 E-value=1.2e-12 Score=115.94 Aligned_cols=177 Identities=18% Similarity=0.120 Sum_probs=113.6
Q ss_pred hcccCCCCccccccccccCccCCCChHHHHHHHHHHHHHHHhcCcceeecCC--C----C-------C----HHHHHHHH
Q 022028 95 KGIADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAG--G----Q-------H----VSEMAKAV 157 (304)
Q Consensus 95 ~g~~~~~~~~~~l~~~~~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~d~~--~----~-------~----~~~~~~~~ 157 (304)
++..++.++.+|+....++....+++++++..++.++.+++++|||++ ++. + . . .+.+.++.
T Consensus 43 ~~~~~~~~l~~~l~~~~~~~~~~~~~ed~~~~~~~~~~e~~~~Gvt~~-E~~~~p~~~~~~~~~~~~~~~~~~~ai~~~~ 121 (325)
T cd01320 43 VAAYNFSDLQDFLAKYDFGLSVLQTEEDFERLAYEYLEDAAADGVVYA-EIRFSPQLHTRRGLSFDEVVEAVLRGLDEAE 121 (325)
T ss_pred hccccCCCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcCCEEE-EEEeCchhhccCCCCHHHHHHHHHHHHHHHH
Confidence 344456677888887777777778999999999999999999999965 321 1 0 0 12344555
Q ss_pred HHcCCeEEeecccccCCCCCCCCcccCChHHHHHHHHHHHHHHcCCCCCCeEEEEeeCcccCCCHHHHHHHHHHHHHhCC
Q 022028 158 ELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKT 237 (304)
Q Consensus 158 ~~~gir~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~e~l~~~~~~a~~~~~ 237 (304)
++.|+|+.+........ ..+..++..+++.++.. +..+.+.++... ...+.+.++.+++.|+++|+
T Consensus 122 ~~~gi~~~l~~~~~~~~-----------~~~~~~~~~~~~~~~~~--~~vvg~~l~~~~-~~~~~~~~~~~~~~A~~~g~ 187 (325)
T cd01320 122 AEFGIKARLILCGLRHL-----------SPESAQETLELALKYRD--KGVVGFDLAGDE-VGFPPEKFVRAFQRAREAGL 187 (325)
T ss_pred HhcCCeEEEEEEecCCC-----------CHHHHHHHHHHHHhccC--CCEEEeecCCCC-CCCCHHHHHHHHHHHHHCCC
Confidence 66799987654432110 11233444455545533 223444343222 23478889999999999999
Q ss_pred eeeEEecCChhhHHHHHHhcCCCCCHHHHHHHhCCCCCCeeEEEeccCCcc--hhc-----------cccccccccc
Q 022028 238 GIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHT--EVN-----------CTFGNFKYAV 301 (304)
Q Consensus 238 ~~~~H~~E~~~~~~~~~~~~g~~~~~~~~l~~~g~l~~~~~~~H~~~l~~~--di~-----------~p~sN~~l~~ 301 (304)
++.+|++|+....+. .+.++..|. + .+.||++++++ +++ ||.||.+++.
T Consensus 188 ~v~~H~~E~~~~~~~-----------~~a~~~~g~---~-~i~H~~~l~~~~~~~~~l~~~gi~v~~~P~sn~~l~~ 249 (325)
T cd01320 188 RLTAHAGEAGGPESV-----------RDALDLLGA---E-RIGHGIRAIEDPELVKRLAERNIPLEVCPTSNVQTGA 249 (325)
T ss_pred ceEEeCCCCCCHHHH-----------HHHHHHcCC---c-ccchhhccCccHHHHHHHHHcCCeEEECCCccccccc
Confidence 999999998533221 122222343 2 48999999654 454 9999999875
|
ADA plays an important role in the purine pathway. Low, as well as high levels of ADA activity have been linked to several diseases. |
| >TIGR03121 one_C_dehyd_A formylmethanofuran dehydrogenase subunit A | Back alignment and domain information |
|---|
Probab=99.45 E-value=1.5e-12 Score=119.91 Aligned_cols=114 Identities=17% Similarity=0.160 Sum_probs=74.9
Q ss_pred EEEEccEEEecCCCCceeeeeeEEEeCCEEEEecCChhhhhhhcCCCceEEeCCCCEeeccccccCccchhhhh---hcc
Q 022028 21 MILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLA---KGI 97 (304)
Q Consensus 21 ~li~~~~ii~~~~~~~~~~~~~I~I~~g~I~~i~~~~~~~~~~~~~~~~vID~~g~iv~PG~ID~H~Hl~~s~~---~g~ 97 (304)
++|+|++|++.... .....++|+|+||+|++|++..+ .+.++||++|++|+|||||+|+|+..... |+.
T Consensus 2 ~iIkng~I~dp~~~-~~~~~~dI~IedGkIveIg~~~~-------~~~eVIDa~G~vVmPGfID~HvHg~gG~~~~~R~~ 73 (556)
T TIGR03121 2 ILIKNGTVYDPANG-IDGEVMDIFIRDGKIVEPVSGGT-------KPAKVIDASGKLVMAGGVDSHTHIAGPKVNVGRLL 73 (556)
T ss_pred EEEEeEEEEcCCCC-ccccccEEEEECCEEEEecCCCC-------CCCeEEECCCCEEEeCEEeeeECCCcccccccccc
Confidence 57899999985421 11235899999999999976432 13479999999999999999999976321 111
Q ss_pred cCCCCccccccccccCccCCCChH--HHHHHHHHHHHHHHhcCcceeecCCC
Q 022028 98 ADDVDLMTWLHDRIWPYESNMTEE--DSYISTLLCGIELIHSGVTCFAEAGG 147 (304)
Q Consensus 98 ~~~~~~~~~l~~~~~~~~~~~~~e--~~~~~~~~~~~~~l~~GvTtv~d~~~ 147 (304)
....|..... +.....+.. .++..+.....++++.|+||++|...
T Consensus 74 ----~pE~~~~~~~-~~~~~~r~Gtt~~lPTt~tt~y~ya~mGyTt~~eaa~ 120 (556)
T TIGR03121 74 ----RPEDHRRDPE-PRTGLTRAGSGFSVPSTYATGYRYARMGYTTVFEAAV 120 (556)
T ss_pred ----CHHHHhhcch-hhhhhcCCCcceEehhHhHHHHHHHhCCccEEecCCC
Confidence 1112221000 111112222 34566677789999999999999764
|
Members of this largely archaeal protein family are subunit A of the formylmethanofuran dehydrogenase. Nomenclature in some bacteria may reflect inclusion of the formyltransferase described by TIGR03119 as part of the complex, and therefore call this protein formyltransferase/hydrolase complex Fhc subunit A. Note that this model does not distinguish tungsten (FwdA) from molybdenum-containing (FmdA) forms of this enzyme; a single gene from this family is expressed constitutively in Methanobacterium thermoautotrophicum, which has both tungsten and molybdenum forms and may work interchangeably. |
| >PRK08044 allantoinase; Provisional | Back alignment and domain information |
|---|
Probab=99.44 E-value=2.1e-11 Score=112.49 Aligned_cols=91 Identities=24% Similarity=0.319 Sum_probs=66.7
Q ss_pred cccEEEEccEEEecCCCCceeeeeeEEEeCCEEEEecCChhhhhhhcCCCceEEeCCCCEeeccccccCccchhhhhhcc
Q 022028 18 SSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGI 97 (304)
Q Consensus 18 ~~~~li~~~~ii~~~~~~~~~~~~~I~I~~g~I~~i~~~~~~~~~~~~~~~~vID~~g~iv~PG~ID~H~Hl~~s~~~g~ 97 (304)
+.+++|+|++|++.+ .. ..++|+|+||+|.+|++..+ .+.++||++|.+++|||||+|+|+.....
T Consensus 2 ~~~~~i~n~~vi~~~---~~-~~~~i~I~dg~I~~i~~~~~-------~~~~~iD~~G~~v~Pg~iD~h~h~~~~~~--- 67 (449)
T PRK08044 2 SFDLIIKNGTVILEN---EA-RVVDIAVKGGKIAAIGQDLG-------DAKEVMDASGLVVSPGMVDAHTHISEPGR--- 67 (449)
T ss_pred CceEEEECcEEEcCC---CC-EEEEEEEECCEEEEecCCCC-------CCCeEEECCCCEEcCCeeccccccCCCCc---
Confidence 346889999999843 22 34799999999999986431 24589999999999999999999854110
Q ss_pred cCCCCccccccccccCccCCCChHHHHHHHHHHHHHHHhcCcceeecCC
Q 022028 98 ADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAG 146 (304)
Q Consensus 98 ~~~~~~~~~l~~~~~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~d~~ 146 (304)
.. .+++ ......++..|+||++|+.
T Consensus 68 -------------------~~-~e~~----~~~~~aa~~gGvTtv~d~~ 92 (449)
T PRK08044 68 -------------------SH-WEGY----ETGTRAAAKGGITTMIEMP 92 (449)
T ss_pred -------------------cc-cccH----HHHHHHHHhCCceEEECCc
Confidence 00 1222 2334567899999999986
|
|
| >PRK10027 cryptic adenine deaminase; Provisional | Back alignment and domain information |
|---|
Probab=99.43 E-value=6.2e-12 Score=118.15 Aligned_cols=176 Identities=15% Similarity=0.161 Sum_probs=105.0
Q ss_pred ccEEEEccEEEecCCCCceeeeeeEEEeCCEEEEecCChhhhhhhcCCCceEEeCCCCEeeccccccCccchhhhhhccc
Q 022028 19 STMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIA 98 (304)
Q Consensus 19 ~~~li~~~~ii~~~~~~~~~~~~~I~I~~g~I~~i~~~~~~~~~~~~~~~~vID~~g~iv~PG~ID~H~Hl~~s~~~g~~ 98 (304)
.+++|+|++|++.... .+ ..++|.|++|+|.+|++..+. ..+.++||++|++|+|||||+|+|+..+.
T Consensus 30 ~dllI~ng~vv~~~~~-~~-~~~~V~I~~GrI~~Vg~~~~~-----~~~~~vIDa~G~~v~PGlIDaHvHiess~----- 97 (588)
T PRK10027 30 ADYIIDNVSILDLING-GE-ISGPIVIKGRYIAGVGAEYAD-----APALQRIDARGATAVPGFIDAHLHIESSM----- 97 (588)
T ss_pred CCEEEECcEEEeCCCC-cE-EeeEEEEECCEEEEeCCCCCC-----CCCCeEEECCCCEEEECeEeccccCCccc-----
Confidence 4578999999985422 33 457899999999999764321 12458999999999999999999996531
Q ss_pred CCCCccccccccccCccCCCChHHHHHHHHHHHHHHHhcCcceeecCCCC--------CHHHHHHHHHHcCCeEEeeccc
Q 022028 99 DDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQ--------HVSEMAKAVELLGLRACLVQST 170 (304)
Q Consensus 99 ~~~~~~~~l~~~~~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~d~~~~--------~~~~~~~~~~~~gir~~~~~~~ 170 (304)
++++++. ..++..|+||+++.... ..+.+.+.+...+++.+...
T Consensus 98 -------------------~~p~~~a-------~aal~~G~TtVv~dPhei~nv~g~~gi~~~l~~a~~~p~~~~~~~-- 149 (588)
T PRK10027 98 -------------------MTPVTFE-------TATLPRGLTTVICDPHEIVNVMGEAGFAWFARCAEQARQNQYLQV-- 149 (588)
T ss_pred -------------------CCHhHHH-------HHHHhCceEEEEcCCCCcccCCCHHHHHHHHHHhhhCCCeeEEee--
Confidence 2233332 13689999999873221 13345556666676654332
Q ss_pred ccCCCCCC-CCcccCChHHHHHHHHHHHHHHcCCCCCCeE--EEEeeCcccCCCHHHHHHHHHHHHHhCCeeeEEec
Q 022028 171 MDCGEGLP-ASWAVRTTDDCIQSQKELYAKHHHAADGRIR--IWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVA 244 (304)
Q Consensus 171 ~d~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~--~~~~~~~~~~~~~e~l~~~~~~a~~~~~~~~~H~~ 244 (304)
...+|..+ -+..++ .-..++..++++. +..+. -.+...+.....++.++.+... +++.+.-|..
T Consensus 150 ps~vpa~~~~Et~Ga--~~~~~~~~~~l~~-----~~v~glgEvMn~~~V~~~d~~~~~ki~~~---~~~~idGH~p 216 (588)
T PRK10027 150 SSCVPALEGCDVNGA--SFTLEQMLAWRDH-----PQVTGLAEMMDYPGVISGQNALLDKLDAF---RHLTLDGHCP 216 (588)
T ss_pred cccCcCCcccccCCC--cCCHHHHHHHhcC-----CCceeEEeccCccccccCCHHHHHHHHHh---CCCceECCCC
Confidence 22333222 111111 0111223333321 12221 1122234456688888877733 7889999975
|
|
| >PRK08417 dihydroorotase; Provisional | Back alignment and domain information |
|---|
Probab=99.42 E-value=1e-11 Score=112.48 Aligned_cols=148 Identities=14% Similarity=0.167 Sum_probs=84.2
Q ss_pred EEEeCCEEEEecCChhhhhhhcCCCceEEeCCCCEeeccccccCccchhhhhhcccCCCCccccccccccCccCCCChHH
Q 022028 43 VFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIADDVDLMTWLHDRIWPYESNMTEED 122 (304)
Q Consensus 43 I~I~~g~I~~i~~~~~~~~~~~~~~~~vID~~g~iv~PG~ID~H~Hl~~s~~~g~~~~~~~~~~l~~~~~~~~~~~~~e~ 122 (304)
|+|+||||++|++.. .+.++||++|++|+|||||+|+|+... ..+.++
T Consensus 1 i~I~dG~I~~i~~~~--------~~~~viDa~g~~vlPG~ID~HvH~~~~------------------------~~~~e~ 48 (386)
T PRK08417 1 IRIKDGKITEIGSDL--------KGEEILDAKGKTLLPALVDLNVSLKND------------------------SLSSKN 48 (386)
T ss_pred CEEECCEEEEecCCC--------CCCeEEECCCCEEccCeeEEeeeeCCC------------------------CcChhh
Confidence 579999999997653 145899999999999999999998431 011233
Q ss_pred HHHHHHHHHHHHHhcCcceeecCCCCCH----HHHHHHHHH-cCCeEEeecccccCCCCCCCCcccCChHHHHHHHHHHH
Q 022028 123 SYISTLLCGIELIHSGVTCFAEAGGQHV----SEMAKAVEL-LGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELY 197 (304)
Q Consensus 123 ~~~~~~~~~~~~l~~GvTtv~d~~~~~~----~~~~~~~~~-~gir~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~~~ 197 (304)
+. .+...++.+||||++++..... ...++...+ .+-.. ..+.+... .. . ..+.+++..++.
T Consensus 49 ~~----t~s~aA~aGGvTtv~dmpnt~P~~~~~~~~~~~~~~~~~~~---~~~~~~~~-~~-~-----~~~~~~~i~~l~ 114 (386)
T PRK08417 49 LK----SLENECLKGGVGSIVLYPDSTPAIDNEIALELINSAQRELP---MQIFPSIR-AL-D-----EDGKLSNIATLL 114 (386)
T ss_pred HH----HHHHHHHcCCcEEEEeCCCCCCCCCCHHHHHHHHHHhhccC---CcEEEEEE-EE-C-----CCccHHHHHHHH
Confidence 33 3345578999999999863211 112222111 11100 00111100 00 0 011122333332
Q ss_pred HHHcCCCCCCeEEEEeeCcccCCCHHHHHHHHHHHHHhCCeeeEEecCCh
Q 022028 198 AKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIP 247 (304)
Q Consensus 198 ~~~~~~~~~~i~~~~~~~~~~~~~~e~l~~~~~~a~~~~~~~~~H~~E~~ 247 (304)
.. |...+... ...++..+.++++.++++|+++.+|+ |..
T Consensus 115 ----~~--Gv~~~k~~----~~~~~~~l~~~~~~a~~~g~~V~~Ha-Ed~ 153 (386)
T PRK08417 115 ----KK--GAKALELS----SDLDANLLKVIAQYAKMLDVPIFCRC-EDS 153 (386)
T ss_pred ----HC--CCEEEECC----CCCCHHHHHHHHHHHHHcCCEEEEeC-CCH
Confidence 21 22211111 14678889999999999999999996 553
|
|
| >cd01304 FMDH_A Formylmethanofuran dehydrogenase (FMDH) subunit A; Methanogenic bacteria and archea derive the energy for autotrophic growth from methanogenesis, the reduction of CO2 with molecular hydrogen as the electron donor | Back alignment and domain information |
|---|
Probab=99.41 E-value=6.7e-12 Score=115.13 Aligned_cols=61 Identities=16% Similarity=0.266 Sum_probs=48.8
Q ss_pred EEccEEEecCCCCceeeeeeEEEeCCEEEEecCChhhhhhhcCCCceEEeCCCCEeeccccccCccchhh
Q 022028 23 LHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQ 92 (304)
Q Consensus 23 i~~~~ii~~~~~~~~~~~~~I~I~~g~I~~i~~~~~~~~~~~~~~~~vID~~g~iv~PG~ID~H~Hl~~s 92 (304)
|+|++|++.... ....+++|+|+||||++|++.. + +.++||++|++|+|||||+|+|+...
T Consensus 1 Ikng~V~d~~~~-~~~~~~dI~IedGkIv~Vg~~~------~--~~~vID~~G~~VmPGfID~HtH~~gg 61 (541)
T cd01304 1 IKNGTVYDPLNG-INGEKMDIFIRDGKIVESSSGA------K--PAKVIDASGKVVMAGGVDMHSHIAGG 61 (541)
T ss_pred CEEEEEEcCCCc-ccccccEEEEECCEEEEEccCC------C--CCeEEECCCCEEECCeeeeeeCcccc
Confidence 578999986532 2246789999999999998642 1 34799999999999999999999753
|
FMDH catalyzes the first step in methanogenesis, the formyl-methanofuran synthesis. In this step, CO2 is bound to methanofuran and subsequently reduced to the formyl state with electrons derived from hydrogen. |
| >TIGR00857 pyrC_multi dihydroorotase, multifunctional complex type | Back alignment and domain information |
|---|
Probab=99.39 E-value=5.5e-11 Score=108.69 Aligned_cols=156 Identities=19% Similarity=0.197 Sum_probs=86.5
Q ss_pred eeeeEEEeCCEEEEecCChhhhhhhcCCCceEEeCCCCEeeccccccCccchhhhhhcccCCCCccccccccccCccCCC
Q 022028 39 RNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIADDVDLMTWLHDRIWPYESNM 118 (304)
Q Consensus 39 ~~~~I~I~~g~I~~i~~~~~~~~~~~~~~~~vID~~g~iv~PG~ID~H~Hl~~s~~~g~~~~~~~~~~l~~~~~~~~~~~ 118 (304)
..++|+|+||||++|++... +.+.++||++|++|+|||||+|+|+... . ..
T Consensus 4 ~~~~v~I~~g~I~~i~~~~~------~~~~~~ida~g~~v~PG~ID~H~H~~~~--------~---------------~~ 54 (411)
T TIGR00857 4 TEVDILVEGGRIKKIGKLRI------PPDAEVIDAKGLLVLPGFIDLHVHLRDP--------G---------------EE 54 (411)
T ss_pred EEEEEEEECCEEEEeeccCC------CCCCeEEECCCCEEecCEEEcccCCCCC--------C---------------Cc
Confidence 46799999999999974211 1245799999999999999999999530 0 01
Q ss_pred ChHHHHHHHHHHHHHHHhcCcceeecCCCC-----CHHHHHHHHHHcC----CeEEeecccccCCCCCCCCcccCChHHH
Q 022028 119 TEEDSYISTLLCGIELIHSGVTCFAEAGGQ-----HVSEMAKAVELLG----LRACLVQSTMDCGEGLPASWAVRTTDDC 189 (304)
Q Consensus 119 ~~e~~~~~~~~~~~~~l~~GvTtv~d~~~~-----~~~~~~~~~~~~g----ir~~~~~~~~d~g~~~~~~~~~~~~~~~ 189 (304)
..+++.. ....++..||||++++... ..+.+....+... +.......+.. .. ....
T Consensus 55 ~~~~~~~----~~~~~~~~GvTtv~~~~~t~p~~~~~~~l~~~~~~~~~~~~vd~~~~~~~~~-------~~----~~~~ 119 (411)
T TIGR00857 55 YKEDIES----GSKAAAHGGFTTVADMPNTKPPIDTPETLEWKLQRLKKVSLVDVHLYGGVTQ-------GN----QGKE 119 (411)
T ss_pred cHhHHHH----HHHHHHhCCeEEEEEecCCCCCCCcHHHHHHHHHHhccCCcccEEEEEEEec-------CC----cccc
Confidence 1223222 2345789999999986421 1122222212211 11111111110 00 0011
Q ss_pred HHHHHHHHHHHcCCCCCCeEEEEeeCcccCCCHHHHHHHHHHHHHhCCeeeEEec
Q 022028 190 IQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVA 244 (304)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~e~l~~~~~~a~~~~~~~~~H~~ 244 (304)
+++..++.+ .|.+...+........++..+.++++.++++|+++.+|+-
T Consensus 120 l~e~~~l~~------~Gv~g~~f~~~~~~~~~~~~l~~~~~~a~~~g~~v~iH~E 168 (411)
T TIGR00857 120 LTEAYELKE------AGAVGRMFTDDGSEVQDILSMRRALEYAAIAGVPIALHAE 168 (411)
T ss_pred HHHHHHHHH------CCcEEEEEEeCCcccCCHHHHHHHHHHHHHcCCEEEEecC
Confidence 222223221 1222211222122235777888999999999999999963
|
All proteins described by this model should represent active and inactive dihydroorotase per se and functionally equivalent domains of multifunctional proteins from higher eukaryotes, but exclude related proteins such as allantoinase. |
| >TIGR01430 aden_deam adenosine deaminase | Back alignment and domain information |
|---|
Probab=99.39 E-value=4.7e-12 Score=112.16 Aligned_cols=170 Identities=17% Similarity=0.146 Sum_probs=110.2
Q ss_pred CCccccccccccCccCCCChHHHHHHHHHHHHHHHhcCcceeecCC--CC---------------CHHHHHHHHHHcCCe
Q 022028 101 VDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAG--GQ---------------HVSEMAKAVELLGLR 163 (304)
Q Consensus 101 ~~~~~~l~~~~~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~d~~--~~---------------~~~~~~~~~~~~gir 163 (304)
.+|.+|+....|+.....++++++..++..+.++++.||| +.++. +. ..+.+.++.++.|++
T Consensus 48 ~~l~~~l~~~~~~~~~~~t~e~l~~~~~~~~~e~~~~Gv~-y~E~r~~p~~~~~~g~~~~~~~~~~~~~i~~a~~~~gi~ 126 (324)
T TIGR01430 48 RDLQDFLAKYDFGVEVLRTEDDFKRLAYEYVEKAAKDGVV-YAEVFFDPQLHTNRGISPDTVVEAVLDGLDEAERDFGIK 126 (324)
T ss_pred CCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcCCE-EEEEEeCccccccCCCCHHHHHHHHHHHHHHHHHhcCCe
Confidence 4577888877777777789999999999999999999995 55532 10 012345556778998
Q ss_pred EEeecccccCCCCCCCCcccCChHHHHHHHHHHHHHHcCCCCCCeEEEEeeCcccCCCHHHHHHHHHHHHHhCCeeeEEe
Q 022028 164 ACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHV 243 (304)
Q Consensus 164 ~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~e~l~~~~~~a~~~~~~~~~H~ 243 (304)
+.+...++... . .+.+++..++...+.. +..+.+.+.. .....+++.++.+++.|+++|+++.+|+
T Consensus 127 ~~li~~~~r~~----------~-~~~~~~~~~~~~~~~~--~~vvg~~l~~-~e~~~~~~~~~~~~~~A~~~g~~i~~Ha 192 (324)
T TIGR01430 127 SRLILCGMRHK----------Q-PEAAEETLELAKPYKE--QTIVGFGLAG-DERGGPPPDFVRAFAIARELGLHLTVHA 192 (324)
T ss_pred EEEEEEEeCCC----------C-HHHHHHHHHHHHhhcc--CcEEEecCCC-CCCCCCHHHHHHHHHHHHHCCCCeEEec
Confidence 86655554321 1 1233334444444332 1233333332 2245678899999999999999999999
Q ss_pred cCChhhHHHHHHhcCCCCCHHHHHHHhCCCCCCeeEEEeccCCc--chhc-----------ccccccccc
Q 022028 244 AEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNH--TEVN-----------CTFGNFKYA 300 (304)
Q Consensus 244 ~E~~~~~~~~~~~~g~~~~~~~~l~~~g~l~~~~~~~H~~~l~~--~di~-----------~p~sN~~l~ 300 (304)
+|+....+ ..+.+...|. . .++||+++++ ++++ ||.||++++
T Consensus 193 ~E~~~~~~-----------~~~~~~~~g~---~-ri~Hg~~l~~~~~~i~~l~~~gi~v~~cP~Sn~~l~ 247 (324)
T TIGR01430 193 GELGGPES-----------VREALDDLGA---T-RIGHGVRALEDPELLKRLAQENITLEVCPTSNVALG 247 (324)
T ss_pred CCCCChHH-----------HHHHHHHcCc---h-hcchhhhhccCHHHHHHHHHcCceEEECCccccccc
Confidence 99843211 1122223444 2 4899999954 4555 999999987
|
This family includes the experimentally verified adenosine deaminases of mammals and E. coli. Other members of this family are predicted also to be adenosine deaminase, an enzyme of nucleotide degradation. This family is distantly related to AMP deaminase. |
| >COG0804 UreC Urea amidohydrolase (urease) alpha subunit [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.37 E-value=1.7e-11 Score=106.01 Aligned_cols=180 Identities=20% Similarity=0.276 Sum_probs=123.1
Q ss_pred CCCCCCCCC-CCcccEEEEccEEEecCCCCceeeeeeEEEeCCEEEEecCChhhhhh-----hcCCCceEEeCCCCEeec
Q 022028 7 GGGSSSGSL-GSSSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQ-----FSQMADQIIDLQSQILLP 80 (304)
Q Consensus 7 ~~~~~~~~~-~~~~~~li~~~~ii~~~~~~~~~~~~~I~I~~g~I~~i~~~~~~~~~-----~~~~~~~vID~~g~iv~P 80 (304)
|++++.... ....+++|+|+.|++.. .+ -+++|.|+||||.+||.+..+..+ ..+...++|-++|+++..
T Consensus 54 GMgqs~~~~~~~~~D~VITNa~IiD~~---Gi-~KADiGikdGrI~~IGKaGNPd~~dgV~iiiG~sTe~iagEg~I~TA 129 (568)
T COG0804 54 GMGQSQRLTRAGALDLVITNALIIDYW---GI-VKADIGIKDGRIAGIGKAGNPDIMDGVTIIIGPSTEIIAGEGKIVTA 129 (568)
T ss_pred ccCcCccccccCcccEEEeeeEEEecc---ce-EEeecccccceEEEeecCCCCCccCCceEEeccccceecCCceEEee
Confidence 445444433 33457899999999853 45 478999999999999987764321 112356899999999999
Q ss_pred cccccCccchhhhhhcccCCCCccccccccccCccCCCChHHHHHHHHHHHHHHHhcCcceeec---------------C
Q 022028 81 GFVNTHVHTSQQLAKGIADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAE---------------A 145 (304)
Q Consensus 81 G~ID~H~Hl~~s~~~g~~~~~~~~~~l~~~~~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~d---------------~ 145 (304)
|-||+|+|.-. |+++. ++|.+|+||+.. .
T Consensus 130 GGiDtHiHfI~----------------------------Pqqi~--------~Al~sGiTtmiGGGtGpa~Gt~aTT~Tp 173 (568)
T COG0804 130 GGIDTHIHFIC----------------------------PQQIE--------EALASGITTMIGGGTGPADGTNATTCTP 173 (568)
T ss_pred ccccceeEEec----------------------------HHHHH--------HHHhcCcEEEecCccCCCCCcccccccC
Confidence 99999999843 33333 478899999863 2
Q ss_pred CCCCHHHHHHHHHHcCCeEEeecccccCCCCCCCCcccCChHHHHHHHHHHHHHHcCCCCCCeEEEEeeCcccCCCHHHH
Q 022028 146 GGQHVSEMAKAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLL 225 (304)
Q Consensus 146 ~~~~~~~~~~~~~~~gir~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~e~l 225 (304)
+.++...++++++...+..-+ ...|....+. ...+.++. |- +++..|--|..++..+
T Consensus 174 G~w~i~rMl~a~d~~p~N~g~----lgKGn~s~~~-----------~L~Eqi~a------Ga--~GlKlHEDWG~TpaaI 230 (568)
T COG0804 174 GPWHIARMLQAADGLPMNIGF----LGKGNASNPA-----------PLAEQIEA------GA--IGLKLHEDWGATPAAI 230 (568)
T ss_pred CHHHHHHHHHhhhcCceeeEE----eecCCCCCch-----------hHHHHHhh------cc--ceeEeecccCCCHHHH
Confidence 234577889998888777622 1122211111 11222222 22 3566777899999999
Q ss_pred HHHHHHHHHhCCeeeEEecCChhhH
Q 022028 226 LETRDMAREFKTGIHMHVAEIPYEN 250 (304)
Q Consensus 226 ~~~~~~a~~~~~~~~~H~~E~~~~~ 250 (304)
+.++++|.++++.+.+|- ++.+|.
T Consensus 231 ~~~L~VAD~~DvqVaiHt-DTLNEs 254 (568)
T COG0804 231 DTCLSVADEYDVQVAIHT-DTLNES 254 (568)
T ss_pred HHHHhhhhhhceEEEEee-cccccc
Confidence 999999999999999994 454443
|
|
| >cd01309 Met_dep_hydrolase_C Metallo-dependent hydrolases, subgroup C is part of the superfamily of metallo-dependent hydrolases, a large group of proteins that show conservation in their 3-dimensional fold (TIM barrel) and in details of their active site | Back alignment and domain information |
|---|
Probab=99.32 E-value=7.7e-12 Score=112.21 Aligned_cols=88 Identities=18% Similarity=0.234 Sum_probs=56.9
Q ss_pred CCEEEEecCChhhhhhhcCCCceEEeCCCCEeeccccccCccchhhhhhcccCCCCccccccccccCccCCCChHHHHHH
Q 022028 47 QDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIADDVDLMTWLHDRIWPYESNMTEEDSYIS 126 (304)
Q Consensus 47 ~g~I~~i~~~~~~~~~~~~~~~~vID~~g~iv~PG~ID~H~Hl~~s~~~g~~~~~~~~~~l~~~~~~~~~~~~~e~~~~~ 126 (304)
||||++|++.... +.+.++||++|++|+|||||+|+|++.+.........+..++. .+....++..+.+..
T Consensus 1 ~gkI~~i~~~~~~-----~~~~~vid~~g~~v~Pg~id~h~h~~~~~~~~~~~~~d~~e~~----~~~~p~~~~~d~~~~ 71 (359)
T cd01309 1 DGKIVAVGAEITT-----PADAEVIDAKGKHVTPGLIDAHSHLGLDEEGGVRETSDANEET----DPVTPHVRAIDGINP 71 (359)
T ss_pred CCEEEEEcCCCCC-----CCCCeEEeCCCCEEcCcEEecccccCccccCCCcCcCCccccC----CCCCceeEeecccCC
Confidence 6999999986542 2367899999999999999999999886554322211111011 111122333344444
Q ss_pred HHHHHHHHHhcCcceee
Q 022028 127 TLLCGIELIHSGVTCFA 143 (304)
Q Consensus 127 ~~~~~~~~l~~GvTtv~ 143 (304)
....+..+..+|||++.
T Consensus 72 ~~~~~~~a~~~GvT~~~ 88 (359)
T cd01309 72 DDEAFKRARAGGVTTVQ 88 (359)
T ss_pred CCHhHHHHHhcCceEEE
Confidence 44566678899999984
|
The vast majority of the members have a conserved metal binding site, involving four histidines and one aspartic acid residue. In the common reaction mechanism, the metal ion (or ions) deprotonate a water molecule for a nucleophilic attack on the substrate. The function of this subgroup is unknown. |
| >COG3454 Metal-dependent hydrolase involved in phosphonate metabolism [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.22 E-value=4.1e-11 Score=101.09 Aligned_cols=94 Identities=31% Similarity=0.435 Sum_probs=64.4
Q ss_pred EEEccEEEecCCCCceeeeeeEEEeCCEEEEecCChhhhhhhcCCCceEEeCCCCEeeccccccCccchhhhhhcccCCC
Q 022028 22 ILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIADDV 101 (304)
Q Consensus 22 li~~~~ii~~~~~~~~~~~~~I~I~~g~I~~i~~~~~~~~~~~~~~~~vID~~g~iv~PG~ID~H~Hl~~s~~~g~~~~~ 101 (304)
++.|++|+..| +++ ++.|+|+||+|..|...... ...-+|++|.+++|||||+|+--..-.+ ...
T Consensus 2 ~lsnarivl~D---~v~-~gsv~i~DG~Ia~i~~g~s~-------~~~~~d~eGd~LLPGlIeLHtD~lE~~~----~PR 66 (377)
T COG3454 2 ILSNARIVLED---RVV-NGSVLIRDGLIADIDEGISP-------LAAGIDGEGDYLLPGLIELHTDNLERFM----TPR 66 (377)
T ss_pred ccccceEEeec---cee-eeeEEEecceEeeeccccCc-------ccccccCCCCeecccchhhcchhhhccc----CCC
Confidence 57899999866 565 49999999999999887642 2457899999999999999986543211 011
Q ss_pred CccccccccccCccCCCChHHHHHHHHHHHHHHHhcCcceeecC
Q 022028 102 DLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEA 145 (304)
Q Consensus 102 ~~~~~l~~~~~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~d~ 145 (304)
+-.. ||. ..+....=..++.+|+|||+|.
T Consensus 67 PgV~------wp~---------~aAi~ahD~~l~~sGITTv~da 95 (377)
T COG3454 67 PGVR------WPP---------IAAILAHDAQLAASGITTVLDA 95 (377)
T ss_pred CCCC------CCc---------hHHHHHhhHHHHhcChhhHHhh
Confidence 1111 211 1122223356789999999874
|
|
| >COG1229 FwdA Formylmethanofuran dehydrogenase subunit A [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=99.20 E-value=7.7e-10 Score=96.05 Aligned_cols=67 Identities=15% Similarity=0.295 Sum_probs=53.0
Q ss_pred CcccEEEEccEEEecCCCCceeeeeeEEEeCCEEEEecCChhhhhhhcCCCceEEeCCCCEeeccccccCccchh
Q 022028 17 SSSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQ 91 (304)
Q Consensus 17 ~~~~~li~~~~ii~~~~~~~~~~~~~I~I~~g~I~~i~~~~~~~~~~~~~~~~vID~~g~iv~PG~ID~H~Hl~~ 91 (304)
|+..++|||+.|+++-.+.. -+..+|.|+||||+.-..-. +...++||++|+++|||-||.|+|...
T Consensus 1 m~~e~~IKNg~V~dPlngin-gE~MDI~vkdGKIVe~sev~-------~~~aKVIDA~gklvm~GGvD~HsHvAG 67 (575)
T COG1229 1 MAMEILIKNGIVYDPLNGIN-GEKMDICVKDGKIVEESEVS-------ESKAKVIDASGKLVMPGGVDSHSHVAG 67 (575)
T ss_pred CCceEEeecCEEecCccCCC-CceeeEEeecCeEeeecccc-------cccceEEeccCcEEecCcccccccccc
Confidence 45678999999998654321 26789999999999754332 124689999999999999999999976
|
|
| >COG3653 N-acyl-D-aspartate/D-glutamate deacylase [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=99.18 E-value=2.7e-11 Score=105.61 Aligned_cols=70 Identities=19% Similarity=0.317 Sum_probs=55.8
Q ss_pred cccEEEEccEEEecCCCCceeeeeeEEEeCCEEEEecCChhhhhhhcCCCceEEeCCCCEeeccccccCccchhhh
Q 022028 18 SSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQL 93 (304)
Q Consensus 18 ~~~~li~~~~ii~~~~~~~~~~~~~I~I~~g~I~~i~~~~~~~~~~~~~~~~vID~~g~iv~PG~ID~H~Hl~~s~ 93 (304)
.++++|+++.|+++.+.. .+ ..+|.|+||+|++|+.....- ..+.++||+.|++|.|||||.|+|-+...
T Consensus 5 ~YD~ViR~g~ifDGtGnp-~f-~tdvgIrDGvIaav~kg~~dg----~~~~eevDaagriVaPGFIDvHtHyD~~~ 74 (579)
T COG3653 5 TYDVVIRDGLIFDGTGNP-PF-TTDVGIRDGVIAAVAKGALDG----TGCPEEVDAAGRIVAPGFIDVHTHYDAEV 74 (579)
T ss_pred eeeEEEeeceEEeCCCCC-cc-ccccccccceEEEEecccccc----cCCCeeecccCcEecccEEEeeeccccee
Confidence 577899999999987643 33 349999999999999865421 11348999999999999999999986633
|
|
| >cd01317 DHOase_IIa Dihydroorotase (DHOase), subgroup IIa; DHOases catalyze the reversible interconversion of carbamoyl aspartate to dihydroorotate, a key reaction in pyrimidine biosynthesis | Back alignment and domain information |
|---|
Probab=99.18 E-value=2.6e-10 Score=103.03 Aligned_cols=70 Identities=7% Similarity=0.069 Sum_probs=49.1
Q ss_pred cCCCH-HHHHHHHHHHHHhCCeeeEEecCChhhHHHHHHhcCCCCCHHHHHHHhCCCCCCeeEEEeccCCcchhcccccc
Q 022028 218 MNATD-RLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEVNCTFGN 296 (304)
Q Consensus 218 ~~~~~-e~l~~~~~~a~~~~~~~~~H~~E~~~~~~~~~~~~g~~~~~~~~l~~~g~l~~~~~~~H~~~l~~~di~~p~sN 296 (304)
+..++ +.+..+.++|++++++++++...+....+ .++...+.|++....++.|+.+++++++....+|
T Consensus 166 p~~~e~~~v~~~~~la~~~~~~i~i~h~ss~~~l~-----------~i~~~~~~G~~~~~e~~~h~L~ld~~~~~~~~~~ 234 (374)
T cd01317 166 PPEAETIMVARDLELAEATGARVHFQHLSTARSLE-----------LIRKAKAKGLPVTAEVTPHHLLLDDEALESYDTN 234 (374)
T ss_pred CHHHHHHHHHHHHHHHHHhCCcEEEEeCCCHHHHH-----------HHHHHHHCCCCEEEEecHHHHhcCHHHHhccCCc
Confidence 34444 36778899999999999884444554443 3455566787766788999999999998644444
Q ss_pred cc
Q 022028 297 FK 298 (304)
Q Consensus 297 ~~ 298 (304)
.+
T Consensus 235 ~k 236 (374)
T cd01317 235 AK 236 (374)
T ss_pred eE
Confidence 33
|
This subgroup also contains proteins that lack the active site, like unc-33, a C.elegans protein involved in axon growth. |
| >PRK01211 dihydroorotase; Provisional | Back alignment and domain information |
|---|
Probab=99.10 E-value=1.8e-10 Score=104.57 Aligned_cols=73 Identities=25% Similarity=0.292 Sum_probs=54.4
Q ss_pred eeeeeEEEeCCEEEEecCChhhhhhhcCCCceEEeCCCCEeeccccccCccchhhhhhcccCCCCccccccccccCccCC
Q 022028 38 FRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIADDVDLMTWLHDRIWPYESN 117 (304)
Q Consensus 38 ~~~~~I~I~~g~I~~i~~~~~~~~~~~~~~~~vID~~g~iv~PG~ID~H~Hl~~s~~~g~~~~~~~~~~l~~~~~~~~~~ 117 (304)
...++|.|+||||++|++... +.++||++| +|+|||||+|+|+.... .
T Consensus 13 ~~~~di~I~dGkI~~i~~~~~--------~~~~ida~g-~vlPG~ID~HvH~r~pg-----------------------~ 60 (409)
T PRK01211 13 FDYLEIEVEDGKIKSIKKDAG--------NIGKKELKG-AILPAATDIHVHFRTPG-----------------------E 60 (409)
T ss_pred EEEEEEEEECCEEEEecCCCC--------CceEEEecc-EEcCCeEEeeeccCCCC-----------------------C
Confidence 356799999999999976431 357899999 99999999999985411 0
Q ss_pred CChHHHHHHHHHHHHHHHhcCcceeecCC
Q 022028 118 MTEEDSYISTLLCGIELIHSGVTCFAEAG 146 (304)
Q Consensus 118 ~~~e~~~~~~~~~~~~~l~~GvTtv~d~~ 146 (304)
-..|++...+ +.++..||||++++.
T Consensus 61 ~~ked~~s~s----~AAaaGGvTtv~dmP 85 (409)
T PRK01211 61 TEKEDFSTGT----LSAIFGGTTFIMDMP 85 (409)
T ss_pred cccCcHHHHH----HHHHcCCcEEEEECC
Confidence 1134444443 346889999999985
|
|
| >PRK04250 dihydroorotase; Provisional | Back alignment and domain information |
|---|
Probab=99.10 E-value=2.3e-10 Score=103.79 Aligned_cols=85 Identities=21% Similarity=0.356 Sum_probs=59.8
Q ss_pred ccEEEecCCCCceeeeeeEEEeCCEEEEecCChhhhhhhcCCCceEEeCCCCEeeccccccCccchhhhhhcccCCCCcc
Q 022028 25 NAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIADDVDLM 104 (304)
Q Consensus 25 ~~~ii~~~~~~~~~~~~~I~I~~g~I~~i~~~~~~~~~~~~~~~~vID~~g~iv~PG~ID~H~Hl~~s~~~g~~~~~~~~ 104 (304)
++++++.+ .+. +++|+|+||+|.+|++... .+.++||++|++|+|||||+|+|+... .
T Consensus 3 ~~~v~~~~---~~~-~~~i~i~~G~I~~i~~~~~-------~~~~~iD~~g~~v~PG~ID~HvH~~~~--------~--- 60 (398)
T PRK04250 3 EGKFLLKG---RIV-EGGIGIENGRISKISLRDL-------KGKEVIKVKGGIILPGLIDVHVHLRDF--------E--- 60 (398)
T ss_pred eEEEEECC---cEE-EEEEEEECCEEEEeeCCCC-------CCCeEEECCCCEEccCEEeccccccCC--------C---
Confidence 56777743 333 7899999999999974111 145899999999999999999998320 0
Q ss_pred ccccccccCccCCCChHHHHHHHHHHHHHHHhcCcceeecCCC
Q 022028 105 TWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGG 147 (304)
Q Consensus 105 ~~l~~~~~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~d~~~ 147 (304)
....+++ ......++..||||++++..
T Consensus 61 ------------~~~~e~~----~~~~~aa~~gGvTtv~~~p~ 87 (398)
T PRK04250 61 ------------ESYKETI----ESGTKAALHGGITLVFDMPN 87 (398)
T ss_pred ------------CCcHHHH----HHHHHHHHhCCeEEEEECCC
Confidence 0112232 33445678999999999753
|
|
| >KOG3892 consensus N-acetyl-glucosamine-6-phosphate deacetylase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.05 E-value=8.8e-10 Score=90.88 Aligned_cols=136 Identities=22% Similarity=0.273 Sum_probs=91.5
Q ss_pred EEEEccEEEecCCCCceeeeeeEEEeCCEEEEecCChhhhhhhcCCCceEEeCCCCEeeccccccCccchhhhhhcccCC
Q 022028 21 MILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIADD 100 (304)
Q Consensus 21 ~li~~~~ii~~~~~~~~~~~~~I~I~~g~I~~i~~~~~~~~~~~~~~~~vID~~g~iv~PG~ID~H~Hl~~s~~~g~~~~ 100 (304)
+-|+|++|+... +. ..-+++|+||||..-.+-. .+....+++.|||+|+++.|||||.....++.
T Consensus 14 lQFtNCrilR~g---~l-~~edlWVR~GRIldpe~vF---FeErt~Ad~riDCgG~IlaPGfIDlQiNGGfG-------- 78 (407)
T KOG3892|consen 14 LQFTNCRILRGG---KL-LREDLWVRGGRILDPEKVF---FEERTVADERIDCGGRILAPGFIDLQINGGFG-------- 78 (407)
T ss_pred eeeeeeEEeeCC---ce-eehheeEeCCeecCccccc---ceeccchhheeccCCeeecCceEEEEecCccc--------
Confidence 458999999843 33 4569999999998644311 00012366899999999999999999988762
Q ss_pred CCccccccccccCccCCCChHHHHHHHHHHHHHHHhcCcceeecCC-CCCHHH---H----------HHHHHHcCCeEEe
Q 022028 101 VDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAG-GQHVSE---M----------AKAVELLGLRACL 166 (304)
Q Consensus 101 ~~~~~~l~~~~~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~d~~-~~~~~~---~----------~~~~~~~gir~~~ 166 (304)
.+| ..+.|++..+....+++++++|+|+++-.- ....+. + -+.+..+|++.
T Consensus 79 vDF-------------S~dte~~~eGvAlVAr~ll~hGvtsf~Pt~~tsp~~~YHkilP~ip~~~~~p~GaG~LG~Hl-- 143 (407)
T KOG3892|consen 79 VDF-------------SQDTEDVGEGVALVARQLLSHGVTSFCPTLVTSPPEVYHKILPQIPVKSGGPHGAGVLGLHL-- 143 (407)
T ss_pred ccc-------------ccchhhhhhhHHHHHHHHHhcCCCcCCCccccCCchhhhhhccccccccCCCCccceeeeec--
Confidence 222 134567778888889999999999987421 010110 0 01112223333
Q ss_pred ecccccCCCCCCCCcccCChHHHHHH
Q 022028 167 VQSTMDCGEGLPASWAVRTTDDCIQS 192 (304)
Q Consensus 167 ~~~~~d~g~~~~~~~~~~~~~~~~~~ 192 (304)
+||+++++.++..++..++.
T Consensus 144 ------EGPFIs~~KrG~HPE~~i~s 163 (407)
T KOG3892|consen 144 ------EGPFISREKRGAHPEAHIRS 163 (407)
T ss_pred ------cCCccChhhcCCCHHHHHhc
Confidence 78999999999888888874
|
|
| >PRK00369 pyrC dihydroorotase; Provisional | Back alignment and domain information |
|---|
Probab=98.75 E-value=1.6e-08 Score=91.53 Aligned_cols=74 Identities=26% Similarity=0.249 Sum_probs=53.8
Q ss_pred eeeeEEEeCCEEEEecCChhhhhhhcCCCceEEeC-CCCEeeccccccCccchhhhhhcccCCCCccccccccccCccCC
Q 022028 39 RNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDL-QSQILLPGFVNTHVHTSQQLAKGIADDVDLMTWLHDRIWPYESN 117 (304)
Q Consensus 39 ~~~~I~I~~g~I~~i~~~~~~~~~~~~~~~~vID~-~g~iv~PG~ID~H~Hl~~s~~~g~~~~~~~~~~l~~~~~~~~~~ 117 (304)
.+..|.|++|+|..|++..+ .+.++||+ +|++|+|||||+|+|+.... +
T Consensus 12 ~~~~~~~~~~~~~~i~~~~~-------~~~~~id~~~G~~vlPG~ID~HvH~r~pg---------~-------------- 61 (392)
T PRK00369 12 GKEIKEICINFDRRIKEIKS-------RCKPDLDLPQGTLILPGAIDLHVHLRGLK---------L-------------- 61 (392)
T ss_pred CCceEEEeeeeeeeEeeccC-------CCCceeecCCCCEEeCCEEEcccccCCCC---------C--------------
Confidence 45678888999988887531 25689999 69999999999999995410 0
Q ss_pred CChHHHHHHHHHHHHHHHhcCcceeecCC
Q 022028 118 MTEEDSYISTLLCGIELIHSGVTCFAEAG 146 (304)
Q Consensus 118 ~~~e~~~~~~~~~~~~~l~~GvTtv~d~~ 146 (304)
...|++...+ +.++..|+||++++.
T Consensus 62 ~~~ed~~sgs----~AAa~GGvTtv~~mP 86 (392)
T PRK00369 62 SYKEDVASGT----SEAAYGGVTLVADMP 86 (392)
T ss_pred cccccHHHHH----HHHHhCCcEEEEECC
Confidence 0123444433 346889999999985
|
|
| >cd01295 AdeC Adenine deaminase (AdeC) directly deaminates adenine to form hypoxanthine | Back alignment and domain information |
|---|
Probab=98.73 E-value=1.8e-07 Score=85.89 Aligned_cols=135 Identities=15% Similarity=0.245 Sum_probs=73.5
Q ss_pred eCCCCEeeccccccCccchhhhhhcccCCCCccccccccccCccCCCChHHHHHHHHHHHHHHHhcCcceeecCCC----
Q 022028 72 DLQSQILLPGFVNTHVHTSQQLAKGIADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGG---- 147 (304)
Q Consensus 72 D~~g~iv~PG~ID~H~Hl~~s~~~g~~~~~~~~~~l~~~~~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~d~~~---- 147 (304)
|++|++|+|||||+|+|+..+. ++++++ ...++..||||+.+...
T Consensus 1 Da~G~~v~PG~ID~H~Hi~~~~------------------------~~~~~~-------~~~a~~~GvTtvv~~p~~~~~ 49 (422)
T cd01295 1 DAEGKYIVPGFIDAHLHIESSM------------------------LTPSEF-------AKAVLPHGTTTVIADPHEIAN 49 (422)
T ss_pred CCCCCEEccCEEEccCCcCCCC------------------------CChHHH-------HHHHHCCCcEEEEeCCCCCCc
Confidence 7899999999999999996521 122221 34578899999998531
Q ss_pred ----CCHHHHHHHHHHcCCeEEeecccccCCCCCCCCcccCChHHHHHHHHHHHHHHcCCCCCCeEEE--EeeCcccCCC
Q 022028 148 ----QHVSEMAKAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIW--FGIRQIMNAT 221 (304)
Q Consensus 148 ----~~~~~~~~~~~~~gir~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~--~~~~~~~~~~ 221 (304)
...+.+.+.++...++.+...+. ..+..+.+... .....++..++++. .+.+.+. +..... ...
T Consensus 50 v~g~~~~~~~~~~a~~~p~~~~~~~p~--~vp~t~~e~~g--~~~~~~~i~~l~~~-----~~vvglgE~md~~~v-~~~ 119 (422)
T cd01295 50 VAGVDGIEFMLEDAKKTPLDIFWMLPS--CVPATPFETSG--AELTAEDIKELLEH-----PEVVGLGEVMDFPGV-IEG 119 (422)
T ss_pred CCCHHHHHHHHHHHhCCCceEEEeCCC--cCCCCCCCCCC--CcCCHHHHHHHhcC-----CCCcEEEEeccCccc-cCC
Confidence 12334455555566666544321 11111111000 00012233333321 1232222 111111 235
Q ss_pred HHHHHHHHHHHHHhCCeeeEEecCCh
Q 022028 222 DRLLLETRDMAREFKTGIHMHVAEIP 247 (304)
Q Consensus 222 ~e~l~~~~~~a~~~~~~~~~H~~E~~ 247 (304)
++.+.+..+.|+++++++.+|+....
T Consensus 120 ~~~l~~~i~~A~~~g~~v~~Ha~g~~ 145 (422)
T cd01295 120 DDEMLAKIQAAKKAGKPVDGHAPGLS 145 (422)
T ss_pred cHHHHHHHHHHHhCCCEEEEeCCCCC
Confidence 56777788999999999999986544
|
This reaction is part of one of the adenine salvage pathways, as well as the degradation pathway. It is important for adenine utilization as a purine, as well as a nitrogen source in bacteria and archea. |
| >cd00530 PTE Phosphotriesterase (PTE) catalyzes the hydrolysis of organophosphate nerve agents, including the chemical warfare agents VX, soman, and sarin as well as the insecticide paraoxon | Back alignment and domain information |
|---|
Probab=98.45 E-value=8.7e-06 Score=71.10 Aligned_cols=155 Identities=11% Similarity=0.070 Sum_probs=88.0
Q ss_pred HHHHHHHHHHHHhcCcceeecCCCC----CHHHHHHHHHHcCCeEEeecccccCCCCCCCCcc-cCChHHHHHHHHHHHH
Q 022028 124 YISTLLCGIELIHSGVTCFAEAGGQ----HVSEMAKAVELLGLRACLVQSTMDCGEGLPASWA-VRTTDDCIQSQKELYA 198 (304)
Q Consensus 124 ~~~~~~~~~~~l~~GvTtv~d~~~~----~~~~~~~~~~~~gir~~~~~~~~d~g~~~~~~~~-~~~~~~~~~~~~~~~~ 198 (304)
...+...+.++.++|+|++++.+.. ....+.+.+++.|++.+.+..+.... ..+.+. ....+...+...+.+.
T Consensus 31 ~~~~~~~~~~~~~~Gvttiv~~~~~~~~~~~~~~~~~~~~~g~~v~~~~G~hp~~--~~~~~~~~~~~~~l~~~~~~~l~ 108 (293)
T cd00530 31 VEAAKEELKRFRAHGGRTIVDATPPGIGRDVEKLAEVARATGVNIVAATGFYKDA--FYPEWVRLRSVEELTDMLIREIE 108 (293)
T ss_pred HHHHHHHHHHHHHcCCCeEEEcCCcccCcCHHHHHHHHHHhCCcEEEecccCCCc--cChHHHhhCCHHHHHHHHHHHHH
Confidence 4567778889999999999988742 35667788888998876554332211 011111 1111222222222222
Q ss_pred HHcCCC---CCCeEEEEeeCcccCCCHHHHHHHHHHHHHhCCeeeEEecCChhhHHHHHHhcCCCCCHHHHHHHhCCCCC
Q 022028 199 KHHHAA---DGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQN 275 (304)
Q Consensus 199 ~~~~~~---~~~i~~~~~~~~~~~~~~e~l~~~~~~a~~~~~~~~~H~~E~~~~~~~~~~~~g~~~~~~~~l~~~g~l~~ 275 (304)
...... .+.++.............+.+++.+++|++.|+++.+|+.+.....+ ..++.+.+.|+..+
T Consensus 109 ~~~~~~~i~~~~IGEigld~~~~~~q~~~f~~~~~lA~~~~~Pv~iH~~~~~~~~~----------~~l~~l~~~g~~~~ 178 (293)
T cd00530 109 EGIEGTGIKAGIIKEAGGSPAITPLEEKVLRAAARAQKETGVPISTHTQAGLTMGL----------EQLRILEEEGVDPS 178 (293)
T ss_pred hccccCCcCceEEEEeecCCCCCHHHHHHHHHHHHHHHHHCCeEEEcCCCCccccH----------HHHHHHHHcCCChh
Confidence 211111 01121111111222334447889999999999999999876411111 15777888888766
Q ss_pred CeeEEEecc-CCcchh
Q 022028 276 NLLSAHTVW-VNHTEV 290 (304)
Q Consensus 276 ~~~~~H~~~-l~~~di 290 (304)
++++.||.. -+.+++
T Consensus 179 ~~vi~H~~~~~~~~~~ 194 (293)
T cd00530 179 KVVIGHLDRNDDPDYL 194 (293)
T ss_pred heEEeCCCCCCCHHHH
Confidence 788999984 343433
|
PTE exists as a homodimer with one active site per monomer. The active site is located next to a binuclear metal center, at the C-terminal end of a TIM alpha- beta barrel motif. The native enzyme contains two zinc ions at the active site however these can be replaced with other metals such as cobalt, cadmium, nickel or manganese and the enzyme remains active. |
| >cd01302 Cyclic_amidohydrolases Cyclic amidohydrolases, including hydantoinase, dihydropyrimidinase, allantoinase, and dihydroorotase, are involved in the metabolism of pyrimidines and purines, sharing the property of hydrolyzing the cyclic amide bond of each substrate to the corresponding N-carbamyl amino acids | Back alignment and domain information |
|---|
Probab=98.35 E-value=1.3e-05 Score=71.49 Aligned_cols=172 Identities=15% Similarity=0.221 Sum_probs=86.2
Q ss_pred CEeeccccccCccchhhhhhcccCCCCccccccccccCccCCCChHHHHHHHHHHHHHHHhcCcceeecCCCC-----CH
Q 022028 76 QILLPGFVNTHVHTSQQLAKGIADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQ-----HV 150 (304)
Q Consensus 76 ~iv~PG~ID~H~Hl~~s~~~g~~~~~~~~~~l~~~~~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~d~~~~-----~~ 150 (304)
++|+||+||+|+|+..... ....|++...+ +.++..|+||++++... ..
T Consensus 1 ~~vlPG~iD~HvH~r~pg~----------------------~~~~e~~~t~t----~aA~~GG~Ttv~~mpn~~p~~~~~ 54 (337)
T cd01302 1 LLVLPGFIDIHVHLRDPGG----------------------TTYKEDFESGS----RAAAAGGVTTVIDMPNTGPPPIDL 54 (337)
T ss_pred CEecCCeeEeeeccCCCCC----------------------CCchhHHHHHH----HHHHhCCCcEEEECCCCCCCCCcH
Confidence 4799999999999954110 00134444433 45688999999997531 12
Q ss_pred HHHHHHHHHcCCeEEeecccccCCCCCCCCcccCChHHHHHHHHHHHHHHcCCCCCCeEEEEeeCc-cc-CCCHHHHHHH
Q 022028 151 SEMAKAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQ-IM-NATDRLLLET 228 (304)
Q Consensus 151 ~~~~~~~~~~gir~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~-~~~~e~l~~~ 228 (304)
+.+....+...-+.++-..+. +. .... ..+++..++. ..+...++.+..... .. ..+++.+.++
T Consensus 55 ~~~~~~~~~a~~~~~~d~~~~--~~-~~~~-------~~~~el~~l~----~~Gv~g~K~f~~~~~~~~~~~~~~~l~~~ 120 (337)
T cd01302 55 PAIELKIKLAEESSYVDFSFH--AG-IGPG-------DVTDELKKLF----DAGINSLKVFMNYYFGELFDVDDGTLMRT 120 (337)
T ss_pred HHHHHHHHHhCcCcEeeEEEE--Ee-ccCc-------cCHHHHHHHH----HcCCcEEEEEEeccCCCccccCHHHHHHH
Confidence 333222233222221111110 00 0010 1122222222 122234565543222 11 4577778888
Q ss_pred HHHHHHhCCeeeEEecCChhhHHHHHHhcCCC--------CCHHHHH---HHhCCCCCCeeEEEeccCCcchhc
Q 022028 229 RDMAREFKTGIHMHVAEIPYENQVVMDTRKVD--------HGTVTFL---DKIEFLQNNLLSAHTVWVNHTEVN 291 (304)
Q Consensus 229 ~~~a~~~~~~~~~H~~E~~~~~~~~~~~~g~~--------~~~~~~l---~~~g~l~~~~~~~H~~~l~~~di~ 291 (304)
++.+++.+.++.+|. | .....+ +..|.. ...++.+ ++.|+----.++.|...|+++++.
T Consensus 121 ~~~~~~~g~~v~~H~-E--r~~~la-~~~g~~l~i~Hiss~~~le~i~~ak~~g~~vt~ev~ph~L~l~~~~~~ 190 (337)
T cd01302 121 FLEIASRGGPVMVHA-E--RAAQLA-EEAGANVHIAHVSSGEALELIKFAKNKGVKVTCEVCPHHLFLDESMLR 190 (337)
T ss_pred HHHHHhcCCeEEEeH-H--HHHHHH-HHhCCcEEEEeCCCHHHHHHHHHHHHCCCcEEEEcChhhheeCHHHhh
Confidence 888888899999996 4 222222 224432 1133333 344541112357888888887764
|
Allantoinases catalyze the degradation of purines, while dihydropyrimidinases and hydantoinases, a microbial counterpart of dihydropyrimidinase, are involved in pyrimidine degradation. Dihydroorotase participates in the de novo synthesis of pyrimidines. |
| >cd00443 ADA_AMPD Adenosine/AMP deaminase | Back alignment and domain information |
|---|
Probab=98.14 E-value=2.7e-05 Score=68.34 Aligned_cols=157 Identities=13% Similarity=0.072 Sum_probs=88.3
Q ss_pred CChHHHHHHHHHHHHHHHhcCcceee---cCC------CCCH----HHHH----HHHHHcC-CeEEeecccccCCCCCCC
Q 022028 118 MTEEDSYISTLLCGIELIHSGVTCFA---EAG------GQHV----SEMA----KAVELLG-LRACLVQSTMDCGEGLPA 179 (304)
Q Consensus 118 ~~~e~~~~~~~~~~~~~l~~GvTtv~---d~~------~~~~----~~~~----~~~~~~g-ir~~~~~~~~d~g~~~~~ 179 (304)
.+.++++..+...+..+.+.||..+- +.. +... +.+. ++....+ +...+-..+.-. .++
T Consensus 39 ~~~~~l~~~~~~~~~~~~~d~V~Y~E~r~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~~~lI~~~~R~---~~~ 115 (305)
T cd00443 39 QKGEALARALKEVIEEFAEDNVQYLELRTTPRLLETEKGLTKEQYWLLVIEGISEAKQWFPPIKVRLILSVDRR---GPY 115 (305)
T ss_pred CCHHHHHHHHHHHHHHHHHcCCEEEEEEcchhhcCcccCCCHHHHHHHHHHHHHHHHHHcCCeeEeEEEEEeCC---CCh
Confidence 45677777788888999999998762 111 1111 1222 2223333 433222111111 111
Q ss_pred CcccCChHHHHHHHHHHHHHHcCCCCCCeEEEEeeCcccCC---CHHHHHHHHHHHHHhC-CeeeEEecCChhhHHHHHH
Q 022028 180 SWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNA---TDRLLLETRDMAREFK-TGIHMHVAEIPYENQVVMD 255 (304)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~---~~e~l~~~~~~a~~~~-~~~~~H~~E~~~~~~~~~~ 255 (304)
+ ..........++...+.+ . .+++...+.+.. +...+...++.|++.| +++.+|++|+.....
T Consensus 116 ~----~~~~~~~~~~~l~~~~~~----~-vvG~Dl~g~E~~~~~~~~~f~~~~~~ar~~g~l~~t~HaGE~~~~~~---- 182 (305)
T cd00443 116 V----QNYLVASEILELAKFLSN----Y-VVGIDLVGDESKGENPLRDFYSYYEYARRLGLLGLTLHCGETGNREE---- 182 (305)
T ss_pred h----hhhhhHHHHHHHHHHhcC----C-EEEEEcCCCCCCCCCCHHHHHHHHHHHHHcCCcceEEeecCCCChHH----
Confidence 1 001122334444444432 2 345665555444 5777888999999999 999999999843221
Q ss_pred hcCCCCCHHHHHHHhCCCCCCeeEEEeccCCc--chhc-----------ccccccccccc
Q 022028 256 TRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNH--TEVN-----------CTFGNFKYAVH 302 (304)
Q Consensus 256 ~~g~~~~~~~~l~~~g~l~~~~~~~H~~~l~~--~di~-----------~p~sN~~l~~~ 302 (304)
..+...++- .-+.||+++.+ +.++ ||+||..++.-
T Consensus 183 ----------v~~~~~~~~--~RIgHg~~~~~~p~~~~~l~~~~i~ie~CP~SN~~~~~~ 230 (305)
T cd00443 183 ----------LLQALLLLP--DRIGHGIFLLKHPELIYLVKLRNIPIEVCPTSNVVLGTV 230 (305)
T ss_pred ----------HHHHHHhcc--ceeeceEecCCCHHHHHHHHHcCCEEEECcchhhhhcCC
Confidence 111122232 25999999988 5554 99999998753
|
Adenosine deaminases (ADAs) are present in pro- and eukaryotic organisms and catalyze the zinc dependent irreversible deamination of adenosine nucleosides to inosine nucleosides and ammonia. The eukaryotic AMP deaminase catalyzes a similar reaction leading to the hydrolytic removal of an amino group at the 6 position of the adenine nucleotide ring, a branch point in the adenylate catabolic pathway. |
| >PRK09875 putative hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=98.12 E-value=0.00017 Score=62.55 Aligned_cols=151 Identities=12% Similarity=0.080 Sum_probs=93.1
Q ss_pred HHHHHHHHHHHhcCcceeecCCC----CCHHHHHHHHHHcCCeEEeecccccCCCCCCCCcccCChHHHHHHHHHHHHHH
Q 022028 125 ISTLLCGIELIHSGVTCFAEAGG----QHVSEMAKAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYAKH 200 (304)
Q Consensus 125 ~~~~~~~~~~l~~GvTtv~d~~~----~~~~~~~~~~~~~gir~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (304)
..+..-+.++.+.|..|++|... +....+.+..++.|++.+.+-.+.. .+..|......+.++..+...+.+...
T Consensus 34 ~~~~~el~~~~~~Gg~tiVd~T~~g~GRd~~~l~~is~~tgv~Iv~~TG~y~-~~~~p~~~~~~~~e~la~~~i~ei~~G 112 (292)
T PRK09875 34 AFICQEMNDLMTRGVRNVIEMTNRYMGRNAQFMLDVMRETGINVVACTGYYQ-DAFFPEHVATRSVQELAQEMVDEIEQG 112 (292)
T ss_pred HHHHHHHHHHHHhCCCeEEecCCCccCcCHHHHHHHHHHhCCcEEEcCcCCC-CccCCHHHhcCCHHHHHHHHHHHHHHh
Confidence 33444556677889999998754 4567888889999999977655443 223344333445555555555555555
Q ss_pred cCC---CCCCe-EEEEeeCcccCCCHHHHHHHHHHHHHhCCeeeEEecCChhhHHHHHHhcCCCCCHHHHHHHhCCCCCC
Q 022028 201 HHA---ADGRI-RIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNN 276 (304)
Q Consensus 201 ~~~---~~~~i-~~~~~~~~~~~~~~e~l~~~~~~a~~~~~~~~~H~~E~~~~~~~~~~~~g~~~~~~~~l~~~g~l~~~ 276 (304)
.+. ..|.| +++......-..-.+.+++..+.+++.|.++.+|........+ -++.+.+.|+--.+
T Consensus 113 i~gt~ikaGvIGeiG~~~~~it~~E~kvl~Aaa~a~~~TG~pi~~Ht~~~~~g~e-----------~l~il~e~Gvd~~r 181 (292)
T PRK09875 113 IDGTELKAGIIAEIGSSEGKITPLEEKVFIAAALAHNQTGRPISTHTSFSTMGLE-----------QLALLQAHGVDLSR 181 (292)
T ss_pred hccCCCcccEEEEEecCCCCCCHHHHHHHHHHHHHHHHHCCcEEEcCCCccchHH-----------HHHHHHHcCcCcce
Confidence 431 23444 3333321111122336788888888899999999654322111 46777888885568
Q ss_pred eeEEEeccCCc
Q 022028 277 LLSAHTVWVNH 287 (304)
Q Consensus 277 ~~~~H~~~l~~ 287 (304)
+++.|+-...+
T Consensus 182 vvi~H~d~~~d 192 (292)
T PRK09875 182 VTVGHCDLKDN 192 (292)
T ss_pred EEEeCCCCCCC
Confidence 99999875433
|
|
| >cd01318 DHOase_IIb Dihydroorotase (DHOase), subgroup IIb; DHOases catalyze the reversible interconversion of carbamoyl aspartate to dihydroorotate, a key reaction in pyrimidine biosynthesis | Back alignment and domain information |
|---|
Probab=98.01 E-value=0.00011 Score=66.15 Aligned_cols=45 Identities=27% Similarity=0.384 Sum_probs=31.0
Q ss_pred CCEeeccccccCccchhhhhhcccCCCCccccccccccCccCCCChHHHHHHHHHHHHHHHhcCcceeecCC
Q 022028 75 SQILLPGFVNTHVHTSQQLAKGIADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAG 146 (304)
Q Consensus 75 g~iv~PG~ID~H~Hl~~s~~~g~~~~~~~~~~l~~~~~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~d~~ 146 (304)
|++|+|||||+|+|+.... + -..|++...+ +.++..|+||++++.
T Consensus 1 G~~vlPG~iD~HvH~r~pg---------~--------------~~~ed~~s~t----~aA~~GGvTtv~~mP 45 (361)
T cd01318 1 GLLILPGVIDIHVHFREPG---------L--------------TYKEDFVSGS----RAAAAGGVTTVMDMP 45 (361)
T ss_pred CCEEecCeeEeeecCCCCC---------C--------------CccCcHHHHH----HHHHcCCCEEEEECC
Confidence 6899999999999995410 0 0123433333 346889999999975
|
This group contains the archeal members of the DHOase family. |
| >PF13147 Amidohydro_4: Amidohydrolase; PDB: 3SFW_B 2FTW_A 2PUZ_B 2GOK_B 3HM7_E 3D6N_A 1XRT_A 1XRF_A 1YNY_B 1K1D_F | Back alignment and domain information |
|---|
Probab=97.84 E-value=1.1e-05 Score=69.80 Aligned_cols=63 Identities=22% Similarity=0.334 Sum_probs=36.8
Q ss_pred eCCCCEeeccccccCcc--chhhhhhcccCCCCccccccccccCccCCCChHHHHHHHHHHHHHHHhcCcceeecCCCCC
Q 022028 72 DLQSQILLPGFVNTHVH--TSQQLAKGIADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQH 149 (304)
Q Consensus 72 D~~g~iv~PG~ID~H~H--l~~s~~~g~~~~~~~~~~l~~~~~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~d~~~~~ 149 (304)
|++|++|+|||||+|+| +.. ...... ...........++.+|+|++.+.....
T Consensus 1 D~~G~~v~PGlID~H~H~~~~~--------~~~~~~-----------------~~~~~~~~~~~~~~~G~tt~~~~~~~~ 55 (304)
T PF13147_consen 1 DASGKYVLPGLIDLHVHGPLGR--------SEDGAP-----------------WAEQAAAASAAALAGGVTTVVDMPGTN 55 (304)
T ss_dssp E-TTSEEEE-EEEEEEECCSSC--------ETTTEE-----------------HSSHHHHHHHHHHHTTEEEEEESSSSS
T ss_pred CCCCCEEccceeeeeeCCCcCC--------CCCCcc-----------------chhhHHHHHHHHHhCCEeEEecCCCCC
Confidence 88999999999999999 211 000000 011222334567899999999866555
Q ss_pred HHHHHHHHHH
Q 022028 150 VSEMAKAVEL 159 (304)
Q Consensus 150 ~~~~~~~~~~ 159 (304)
..........
T Consensus 56 ~~~~~~~~~~ 65 (304)
T PF13147_consen 56 PEELNRARRR 65 (304)
T ss_dssp HHHHHHHHHH
T ss_pred chhhHHHHhh
Confidence 5544444333
|
... |
| >PF02126 PTE: Phosphotriesterase family; InterPro: IPR001559 Synonym(s): Paraoxonase, A-esterase, Aryltriphosphatase, Phosphotriesterase, Paraoxon hydrolase Bacteria such as Brevundimonas diminuta (Pseudomonas diminuta) harbour a plasmid that carries the gene for Aryldialkylphosphatase (3 | Back alignment and domain information |
|---|
Probab=97.75 E-value=0.00028 Score=61.70 Aligned_cols=152 Identities=10% Similarity=0.017 Sum_probs=85.8
Q ss_pred HHHHHHHHHHHHhcCcceeecCCC----CCHHHHHHHHHHcCCeEEeecccccCCCCCCCCcccCChHHHHHHHHHHHHH
Q 022028 124 YISTLLCGIELIHSGVTCFAEAGG----QHVSEMAKAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYAK 199 (304)
Q Consensus 124 ~~~~~~~~~~~l~~GvTtv~d~~~----~~~~~~~~~~~~~gir~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (304)
...+..-+..+-..|+.|++|... .....+.+..++.|++.+.+-.+.-. +..|+.....+.++..+...+.+..
T Consensus 37 ~~~~~~El~~~k~~Gg~tiVd~T~~g~GRd~~~l~~is~~tGv~II~~TG~y~~-~~~p~~~~~~s~e~la~~~i~Ei~~ 115 (308)
T PF02126_consen 37 VEAAVAELKEFKAAGGRTIVDATPIGLGRDVEALREISRRTGVNIIASTGFYKE-PFYPEWVREASVEELADLFIREIEE 115 (308)
T ss_dssp HHHHHHHHHHHHHTTEEEEEE--SGGGTB-HHHHHHHHHHHT-EEEEEEEE-SG-GCSCHHHHTSHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHcCCCEEEecCCcccCcCHHHHHHHHHHhCCeEEEeCCCCcc-ccCChhhhcCCHHHHHHHHHHHHHh
Confidence 444555567777889999999764 45678889999999999766544321 2222222233333333334444444
Q ss_pred HcC---CCCCCeEEEEeeCcccCCCHHHHHHHHHHHHHhCCeeeEEecCCh-hhHHHHHHhcCCCCCHHHHHHHhCCCCC
Q 022028 200 HHH---AADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIP-YENQVVMDTRKVDHGTVTFLDKIEFLQN 275 (304)
Q Consensus 200 ~~~---~~~~~i~~~~~~~~~~~~~~e~l~~~~~~a~~~~~~~~~H~~E~~-~~~~~~~~~~g~~~~~~~~l~~~g~l~~ 275 (304)
-.+ ...|.|+.+.+.......-+..++++...+++.|+++.+|..... ...+ .++.|.+.|+-=.
T Consensus 116 GidgT~ikaG~Ik~~~~~~~it~~E~k~lrAaa~A~~~TG~pI~~H~~~g~~~~~e-----------~~~il~e~Gv~~~ 184 (308)
T PF02126_consen 116 GIDGTGIKAGIIKEIGSSNPITPLEEKVLRAAARAHKETGAPISTHTGRGTRMGLE-----------QLDILEEEGVDPS 184 (308)
T ss_dssp -STTSSB-ESEEEEEEBTTBCEHHHHHHHHHHHHHHHHHT-EEEEEESTTGTCHHH-----------HHHHHHHTT--GG
T ss_pred cCCCCccchhheeEeeccCCCCHHHHHHHHHHHHHHHHhCCeEEEcCCCCCcCHHH-----------HHHHHHHcCCChh
Confidence 332 123556654433222122233678788888889999999986654 2222 4677888888556
Q ss_pred CeeEEEeccCCc
Q 022028 276 NLLSAHTVWVNH 287 (304)
Q Consensus 276 ~~~~~H~~~l~~ 287 (304)
++++.|+--..+
T Consensus 185 rvvigH~D~~~D 196 (308)
T PF02126_consen 185 RVVIGHMDRNPD 196 (308)
T ss_dssp GEEETSGGGST-
T ss_pred HeEEeCCCCCCC
Confidence 889999774333
|
1.8.1 from EC) (PTE) (also known as parathion hydrolase). This enzyme has attracted interest because of its potential use in the detoxification of chemical waste and warfare agents and its ability to degrade agricultural pesticides such as parathion. It acts specifically on synthetic organophosphate triesters and phosphorofluoridates. It does not seem to have a natural occuring substrate and may thus have optimally evolved for utilizing paraoxon. Aryldialkylphosphatase belongs to a family [, ] of enzymes that possess a binuclear zinc metal centre at their active site. The two zinc ions are coordinated by six different residues, six of which being histidines. This family so far includes, in addition to the parathion hydrolase, the following proteins: Escherichia coli protein Php, the substrate of which is not yet known. Mycobacterium tuberculosis phosphotriesterase homology protein Rv0230C. Mammalian phosphotriesterase related protein (PTER) (RPR-1). ; GO: 0008270 zinc ion binding, 0016788 hydrolase activity, acting on ester bonds, 0009056 catabolic process; PDB: 3MSR_A 3OVG_D 3K2G_C 1BF6_B 3OQE_A 3C86_A 3SO7_A 2D2G_A 2R1P_A 2D2H_A .... |
| >PTZ00124 adenosine deaminase; Provisional | Back alignment and domain information |
|---|
Probab=97.71 E-value=0.0014 Score=58.78 Aligned_cols=77 Identities=13% Similarity=0.149 Sum_probs=48.5
Q ss_pred EEEeeCcccCCCHHHHHHHHHHHHHhCCeeeEEecCCh--hhHHHHHHhcCCCCCHHHHHHHhCCCCCCeeEEEeccCCc
Q 022028 210 IWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIP--YENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNH 287 (304)
Q Consensus 210 ~~~~~~~~~~~~~e~l~~~~~~a~~~~~~~~~H~~E~~--~~~~~~~~~~g~~~~~~~~l~~~g~l~~~~~~~H~~~l~~ 287 (304)
+++...+.... ...+..+++.|++.|+++.+|++|.. ..... ..+-+..+|. .| +.||+.+.+
T Consensus 194 vGiDLaG~E~~-~~~f~~~f~~Ar~~Gl~~t~HaGE~~~~~~~~~----------v~~ai~~l~~--~R--IGHG~~~~~ 258 (362)
T PTZ00124 194 VGFDHAGHEVD-LKPFKDIFDYVREAGVNLTVHAGEDVTLPNLNT----------LYSAIQVLKV--KR--IGHGIRVAE 258 (362)
T ss_pred EEEeccCCCCC-cHHHHHHHHHHHHCCCCEEEEeCCCCCCCcchh----------HHHHHHHhCC--Cc--cccccccCC
Confidence 45555555432 24477789999999999999999952 21111 1112222333 23 899999963
Q ss_pred c--hhc-----------cccccccccc
Q 022028 288 T--EVN-----------CTFGNFKYAV 301 (304)
Q Consensus 288 ~--di~-----------~p~sN~~l~~ 301 (304)
+ -++ ||+||..++.
T Consensus 259 d~~l~~~l~~~~I~lEvCPtSN~~~~~ 285 (362)
T PTZ00124 259 SQELIDMVKEKDILLEVCPISNVLLNN 285 (362)
T ss_pred CHHHHHHHHHcCCeEEECCcchhhhhc
Confidence 3 222 9999998864
|
|
| >cd01321 ADGF Adenosine deaminase-related growth factors (ADGF), a novel family of secreted growth-factors with sequence similarty to adenosine deaminase | Back alignment and domain information |
|---|
Probab=97.62 E-value=0.00074 Score=60.22 Aligned_cols=77 Identities=12% Similarity=0.032 Sum_probs=50.9
Q ss_pred EEEeeCccc--CCCHHHHHHHHHHHHHhC--CeeeEEecCChhh----HHHHHHhcCCCCCHHHHHHHhCCCCCCeeEEE
Q 022028 210 IWFGIRQIM--NATDRLLLETRDMAREFK--TGIHMHVAEIPYE----NQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAH 281 (304)
Q Consensus 210 ~~~~~~~~~--~~~~e~l~~~~~~a~~~~--~~~~~H~~E~~~~----~~~~~~~~g~~~~~~~~l~~~g~l~~~~~~~H 281 (304)
+++...+.. ..+.+.+..+++.|++.| +++.+|+.|.... .+. ..+-+ .+|. +| +.|
T Consensus 164 vGidL~G~E~~~~~~~~f~~~f~~ar~~g~~l~~t~HAGE~~~~~~~~~~~----------v~~al-~lg~--~R--IGH 228 (345)
T cd01321 164 AGFDLVGQEDAGRPLLDFLPQLLWFPKQCAEIPFFFHAGETNGDGTETDEN----------LVDAL-LLNT--KR--IGH 228 (345)
T ss_pred EEEecCCCccCCCCHHHHHHHHHHHHHhCCCCceEeecCCCcCCCCCChhH----------HHHHH-HhCC--Cc--Ccc
Confidence 456665554 345777888999999999 9999999998631 111 11222 1222 34 899
Q ss_pred eccCCcchhc-------------cccccccccc
Q 022028 282 TVWVNHTEVN-------------CTFGNFKYAV 301 (304)
Q Consensus 282 ~~~l~~~di~-------------~p~sN~~l~~ 301 (304)
|+.+.+++-. ||+||..++.
T Consensus 229 G~~~~~dp~ll~~l~~~~I~lEvCPtSN~~~~~ 261 (345)
T cd01321 229 GFALPKHPLLMDLVKKKNIAIEVCPISNQVLGL 261 (345)
T ss_pred ccccCcCHHHHHHHHHcCCeEEECcchhhhhcc
Confidence 9999743221 9999998864
|
|
| >cd01306 PhnM PhnM is believed to be a subunit of the membrane associated C-P lyase complex | Back alignment and domain information |
|---|
Probab=97.60 E-value=0.0024 Score=56.37 Aligned_cols=37 Identities=14% Similarity=0.023 Sum_probs=31.5
Q ss_pred CCCHHHHHHHHHHHHHhCCeeeEEecCChhhHHHHHH
Q 022028 219 NATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMD 255 (304)
Q Consensus 219 ~~~~e~l~~~~~~a~~~~~~~~~H~~E~~~~~~~~~~ 255 (304)
..+++.++++++.|+++|+++.+|..++....+.+.+
T Consensus 159 ~~~~~~~~~iv~~A~~~gl~vasH~d~~~~~v~~a~~ 195 (325)
T cd01306 159 AYAPANRSELAALARARGIPLASHDDDTPEHVAEAHE 195 (325)
T ss_pred hcCHHHHHHHHHHHHHCCCcEEEecCCChHHHHHHHH
Confidence 3467889999999999999999999888777666666
|
C-P lyase is thought to catalyze the direct cleavage of inactivated C-P bonds to yield inorganic phosphate and the corresponding hydrocarbons. It is responsible for cleavage of alkylphosphonates, which are utilized as sole phosphorus sources by many bacteria. |
| >PF07969 Amidohydro_3: Amidohydrolase family; InterPro: IPR013108 Amidohydrolases are a diverse superfamily of enzymes which catalyse the hydrolysis of amide or amine bonds in a large number of different substrates including urea, cytosine, AMP, formylmethanofuran, etc [, ] | Back alignment and domain information |
|---|
Probab=97.57 E-value=0.00054 Score=62.58 Aligned_cols=64 Identities=13% Similarity=0.057 Sum_probs=42.1
Q ss_pred eCcccCCCHHHHHHHHHHHHHhCCeeeEEecCChhhHHHHHHhcCCCCCHHHHHHHhCCCCCCeeEEEeccCCcchhc
Q 022028 214 IRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEVN 291 (304)
Q Consensus 214 ~~~~~~~~~e~l~~~~~~a~~~~~~~~~H~~E~~~~~~~~~~~~g~~~~~~~~l~~~g~l~~~~~~~H~~~l~~~di~ 291 (304)
.++....+++.+.++++.|.+.|..+.+|+... .....+. +-+++...- ..+.|+..+++++++
T Consensus 216 ~~g~~~~~~~~l~~~v~~a~~~g~~v~vHa~gd-~a~~~~l----------~a~~~~~~~---~~i~h~~~~~~~~~~ 279 (404)
T PF07969_consen 216 ISGLPSFDPEELEELVRAAREAGLQVAVHAIGD-RAIDEAL----------DAIEAARAR---GRIEHAELIDPDDIE 279 (404)
T ss_dssp ETC--SSSHHHHHHHHHHHHHCT-EEEEEEESH-HHHHHHH----------HHHHHHTCC---HEEEEHCBCCHHHHH
T ss_pred ccccccccchhHHHHHHHHHhcCCeeEEEEcCC-chHHhHH----------HHHHhhccc---ceeeccccCCHHHHH
Confidence 344456778889999999999999999998433 3333332 222233221 179999999998887
|
Also included in this superfamily are the phopshotriesterase enzymes, which hydrolyse P-O bonds. Members participate in a large number of processes including nucleotide metabolism, detoxification and neuronal development. They use a variety of divalent metal cofactors for catalysis: for example adenosine deaminase binds a single zinc ion, phopsphotriesterase binds two, while urease binds nickel. It has been postulated that since some of these proteins, such as those some of those involved in neuronal devlopment, appear to have lost their metal-binding centres, their function may simply be to bind, but not hydrolyse, their target molecules. This entry represents a subset of amidohydrolase domains that participate in different functions including cytosine degradation, atrazine degradation and other metabolic processes. The structure of the domain from Escherichia coli has been studied, and like other amidohydrolases it forms a classical alpha-beta TIM-barrel fold []. The active site is located in the mouth of the enzyme barrel and contains a bound iron ion that coordinates a hydroxyl nucleophile. Substrate binding involves a significant conformational change that sequesters the reaction complex from solvent.; PDB: 4F0R_A 4F0S_A 1V4Y_A 1M7J_A 1RK5_A 1RJP_A 1RJR_A 1RJQ_A 1RK6_A 1V51_A .... |
| >TIGR00010 hydrolase, TatD family | Back alignment and domain information |
|---|
Probab=97.52 E-value=0.00056 Score=58.15 Aligned_cols=126 Identities=12% Similarity=0.066 Sum_probs=64.8
Q ss_pred HHHHhcCcceeecCCCC--CHHHHHHHHHHcCCeEEeecccccCCCCCCCCcccCChHHHHHHHHHHHHHHcCCCCCCeE
Q 022028 132 IELIHSGVTCFAEAGGQ--HVSEMAKAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIR 209 (304)
Q Consensus 132 ~~~l~~GvTtv~d~~~~--~~~~~~~~~~~~gir~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 209 (304)
.++...|+++++.++.. ..+.+.+.++..+ +.+.+..+. |.+........+++.++.++ . ..+.
T Consensus 22 ~~~~~~Gv~~~v~~~~~~~~~~~~~~~~~~~~-~i~~~~Gih-------P~~~~~~~~~~~~~l~~~l~----~--~~~~ 87 (252)
T TIGR00010 22 ERAKAAGVTAVVAVGTDLEDFLRALELAEKYP-NVYAAVGVH-------PLDVDDDTKEDIKELERLAA----H--PKVV 87 (252)
T ss_pred HHHHHcCCCEEEEecCCHHHHHHHHHHHHHCC-CEEEEEEeC-------cchhhcCCHHHHHHHHHHcc----C--CCEE
Confidence 45678899999876532 2345566667777 665433221 21111111222233333322 1 1111
Q ss_pred EEEeeCccc---C-C----CHHHHHHHHHHHHHhCCeeeEEecCChhhHHHHHHhcCCCCCHHHHHHHhCCCCCCeeEEE
Q 022028 210 IWFGIRQIM---N-A----TDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAH 281 (304)
Q Consensus 210 ~~~~~~~~~---~-~----~~e~l~~~~~~a~~~~~~~~~H~~E~~~~~~~~~~~~g~~~~~~~~l~~~g~l~~~~~~~H 281 (304)
+++-.+.. . . ..+.+++..++|+++++++.+|......+ .++.+.+.+. ....+.|
T Consensus 88 -~iGEiGld~~~~~~~~~~q~~~~~~~~~~a~~~~~pv~iH~~~~~~~-------------~~~~l~~~~~--~~~~i~H 151 (252)
T TIGR00010 88 -AIGETGLDYYKADEYKRRQEEVFRAQLQLAEELNLPVIIHARDAEED-------------VLDILREEKP--KVGGVLH 151 (252)
T ss_pred -EEEecccCcCCCCCCHHHHHHHHHHHHHHHHHhCCCeEEEecCccHH-------------HHHHHHhcCC--CCCEEEE
Confidence 22222111 1 1 23688888999999999999998754333 3344444441 2345668
Q ss_pred eccCCc
Q 022028 282 TVWVNH 287 (304)
Q Consensus 282 ~~~l~~ 287 (304)
+..-+.
T Consensus 152 ~~~~~~ 157 (252)
T TIGR00010 152 CFTGDA 157 (252)
T ss_pred ccCCCH
Confidence 764443
|
Several genomes have multiple paralogs related to this family. However, a set of 17 proteins can be found, one each from 17 of the first 20 genomes, such that each member forms a bidirectional best hit across genomes with all other members of the set. This core set (and one other near-perfect member), but not the other paralogs, form the seed for this model. Additionally, members of the seed alignment and all trusted hits, but not all paralogs, have a conserved motif DxHxH near the amino end. The member from E. coli was recently shown to have DNase activity. |
| >cd01294 DHOase Dihydroorotase (DHOase) catalyzes the reversible interconversion of carbamoyl aspartate to dihydroorotate, a key reaction in the pyrimidine biosynthesis | Back alignment and domain information |
|---|
Probab=97.51 E-value=0.0037 Score=55.70 Aligned_cols=23 Identities=4% Similarity=0.036 Sum_probs=20.0
Q ss_pred CHHHHHHHHHHHHHhCCeeeEEe
Q 022028 221 TDRLLLETRDMAREFKTGIHMHV 243 (304)
Q Consensus 221 ~~e~l~~~~~~a~~~~~~~~~H~ 243 (304)
+.+.+..+.+.++++|+++.+|+
T Consensus 111 d~~~l~~~~e~~~~~g~~V~vHa 133 (335)
T cd01294 111 DLEKIYPVLEAMQKLGMPLLVHG 133 (335)
T ss_pred CHHHHHHHHHHHHHcCCeEEEec
Confidence 45678889999999999999996
|
In contrast to the large polyfunctional CAD proteins of higher organisms, this group of DHOases is monofunctional and mainly dimeric. |
| >COG1099 Predicted metal-dependent hydrolases with the TIM-barrel fold [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.41 E-value=0.0042 Score=50.60 Aligned_cols=106 Identities=15% Similarity=0.166 Sum_probs=63.1
Q ss_pred HHHcCCeEEeecccccCCCCCCCCcccCChHHHHHHHHHHHHHHcCCCCCCeEEEEeeCcccCCCHH---HHHHHHHHHH
Q 022028 157 VELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDR---LLLETRDMAR 233 (304)
Q Consensus 157 ~~~~gir~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~e---~l~~~~~~a~ 233 (304)
+.+.|++..++..+... ++|+++ ......+..+.. ..+. +.++-.+....|++ .+++=+++|+
T Consensus 59 a~~~Gl~~~vavGvHPr--~iP~e~---------~~~l~~L~~~l~-~e~V--vAiGEiGLe~~t~~E~evf~~QL~LA~ 124 (254)
T COG1099 59 AEKAGLKLKVAVGVHPR--AIPPEL---------EEVLEELEELLS-NEDV--VAIGEIGLEEATDEEKEVFREQLELAR 124 (254)
T ss_pred HHhhCceeeEEeccCCC--CCCchH---------HHHHHHHHhhcc-cCCe--eEeeecccccCCHHHHHHHHHHHHHHH
Confidence 57788888776554322 234332 222233333322 1222 24555555566665 5677789999
Q ss_pred HhCCeeeEEecCChhhHHHHHHhcCCCCCHHHHHHHhCCCCCCeeEEEecc
Q 022028 234 EFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVW 284 (304)
Q Consensus 234 ~~~~~~~~H~~E~~~~~~~~~~~~g~~~~~~~~l~~~g~l~~~~~~~H~~~ 284 (304)
++++++.+|-...... +...+ .++.+.+.|+-...+++-|+..
T Consensus 125 e~dvPviVHTPr~nK~-e~t~~-------ildi~~~~~l~~~lvvIDH~N~ 167 (254)
T COG1099 125 ELDVPVIVHTPRRNKK-EATSK-------ILDILIESGLKPSLVVIDHVNE 167 (254)
T ss_pred HcCCcEEEeCCCCcch-hHHHH-------HHHHHHHcCCChhheehhcccH
Confidence 9999999998766443 33322 5777777887555666777754
|
|
| >COG1735 Php Predicted metal-dependent hydrolase with the TIM-barrel fold [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.34 E-value=0.011 Score=50.55 Aligned_cols=144 Identities=13% Similarity=0.054 Sum_probs=82.7
Q ss_pred HHHHHHHHhcCcceeecCCC----CCHHHHHHHHHHcCCeEEeecccccCCCCCCCCcccCCh-HHHHHHHHHHHHHHcC
Q 022028 128 LLCGIELIHSGVTCFAEAGG----QHVSEMAKAVELLGLRACLVQSTMDCGEGLPASWAVRTT-DDCIQSQKELYAKHHH 202 (304)
Q Consensus 128 ~~~~~~~l~~GvTtv~d~~~----~~~~~~~~~~~~~gir~~~~~~~~d~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 202 (304)
..-+...+..|+.|++|... +....+.+.+++.|++.+.+-.+.-.. +-+.|....+ ++.-+.....+++...
T Consensus 51 ~~e~~~~~a~Gg~TIVD~T~~~~GRdv~~m~~vs~atglnIV~~TGfy~~~--~~p~~~~~~~i~~~ae~~v~ei~~Gi~ 128 (316)
T COG1735 51 IAELKRLMARGGQTIVDATNIGIGRDVLKMRRVAEATGLNIVAATGFYKAA--FHPEYFALRPIEELAEFVVKEIEEGIA 128 (316)
T ss_pred HHHHHHHHHcCCCeEeeCCccccCcCHHHHHHHHHHhCCcEEEeccccccc--cchhHHhhCCHHHHHHHHHHHHHhccc
Confidence 33455677789999998753 456788999999999987654443221 1123332222 2222233333332211
Q ss_pred ---CCCCCeEEEEeeCcccCCCHH---HHHHHHHHHHHhCCeeeEEecCChhhHHHHHHhcCCCCCHHHHHHHhCCCCCC
Q 022028 203 ---AADGRIRIWFGIRQIMNATDR---LLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNN 276 (304)
Q Consensus 203 ---~~~~~i~~~~~~~~~~~~~~e---~l~~~~~~a~~~~~~~~~H~~E~~~~~~~~~~~~g~~~~~~~~l~~~g~l~~~ 276 (304)
...|.|+..-. ....++. .++++....++.+.++++|.....-..+ -++.+.+.|+-=.+
T Consensus 129 gT~ikAGiIk~~~~---~~~iTp~Eek~lrAaA~A~~~Tg~Pi~tHt~~gt~g~e-----------q~~il~~egvdl~~ 194 (316)
T COG1735 129 GTGIKAGIIKEAGG---SPAITPLEEKSLRAAARAHKETGAPISTHTPAGTMGLE-----------QLRILAEEGVDLRK 194 (316)
T ss_pred CCccccceeeeccC---cccCCHHHHHHHHHHHHHhhhcCCCeEEeccchhhhHH-----------HHHHHHHcCCChhH
Confidence 12244443221 1224443 5666667777789999999865542222 46778888863347
Q ss_pred eeEEEec-cCCc
Q 022028 277 LLSAHTV-WVNH 287 (304)
Q Consensus 277 ~~~~H~~-~l~~ 287 (304)
+.+.||- +.++
T Consensus 195 v~igH~d~n~dd 206 (316)
T COG1735 195 VSIGHMDPNTDD 206 (316)
T ss_pred eeEeccCCCCCh
Confidence 8999998 4444
|
|
| >cd01310 TatD_DNAse TatD like proteins; E | Back alignment and domain information |
|---|
Probab=97.17 E-value=0.0041 Score=52.70 Aligned_cols=51 Identities=10% Similarity=0.131 Sum_probs=34.7
Q ss_pred CHHHHHHHHHHHHHhCCeeeEEecCChhhHHHHHHhcCCCCCHHHHHHHhCCCCCCeeEEEeccCC
Q 022028 221 TDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVN 286 (304)
Q Consensus 221 ~~e~l~~~~~~a~~~~~~~~~H~~E~~~~~~~~~~~~g~~~~~~~~l~~~g~l~~~~~~~H~~~l~ 286 (304)
..+.++...++|+++++++.+|+.....+ ..+.+.+.+ .+..++.|+..-+
T Consensus 106 q~~~~~~~~~~a~e~~~pv~iH~~~~~~~-------------~~~l~~~~~--~~~~~i~H~~~~~ 156 (251)
T cd01310 106 QKEVFRAQLELAKELNLPVVIHSRDAHED-------------VLEILKEYG--PPKRGVFHCFSGS 156 (251)
T ss_pred HHHHHHHHHHHHHHhCCCeEEEeeCchHH-------------HHHHHHhcC--CCCCEEEEccCCC
Confidence 34678999999999999999998755332 344555554 1245666776533
|
coli TatD is a cytoplasmic protein, shown to have magnesium dependent DNase activity. |
| >cd01316 CAD_DHOase The eukaryotic CAD protein is a trifunctional enzyme of carbamoylphosphate synthetase-aspartate transcarbamoylase-dihydroorotase, which catalyzes the first three steps of de novo pyrimidine nucleotide biosynthesis | Back alignment and domain information |
|---|
Probab=97.04 E-value=0.00042 Score=61.85 Aligned_cols=44 Identities=27% Similarity=0.360 Sum_probs=30.1
Q ss_pred CEeeccccccCccchhhhhhcccCCCCccccccccccCccCCCChHHHHHHHHHHHHHHHhcCcceeecCC
Q 022028 76 QILLPGFVNTHVHTSQQLAKGIADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAG 146 (304)
Q Consensus 76 ~iv~PG~ID~H~Hl~~s~~~g~~~~~~~~~~l~~~~~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~d~~ 146 (304)
.+|+|||||.|+|+.... .-..|++...+ +.++..|+||+.|+.
T Consensus 2 ~~vlPG~ID~HvH~r~pg-----------------------~~~~ed~~sgs----~AAa~GGvTtv~dmP 45 (344)
T cd01316 2 TIRLPGLIDVHVHLREPG-----------------------ATHKEDFASGT----KAALAGGFTMVRAMP 45 (344)
T ss_pred eEEeCCeEEeeeccCCCC-----------------------cCCcChHHHHH----HHHHhCCCeEEEECC
Confidence 479999999999995410 01123444433 346889999999974
|
Dihydroorotase (DHOase) catalyzes the third step, the reversible interconversion of carbamoyl aspartate to dihydroorotate. |
| >PF00449 Urease_alpha: Urease alpha-subunit, N-terminal domain; InterPro: IPR011612 Urease (urea amidohydrolase, 3 | Back alignment and domain information |
|---|
Probab=96.96 E-value=0.0024 Score=46.11 Aligned_cols=49 Identities=24% Similarity=0.454 Sum_probs=34.0
Q ss_pred CCCCCCCCCCC-cccEEEEccEEEecCCCCceeeeeeEEEeCCEEEEecCChhh
Q 022028 7 GGGSSSGSLGS-SSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADI 59 (304)
Q Consensus 7 ~~~~~~~~~~~-~~~~li~~~~ii~~~~~~~~~~~~~I~I~~g~I~~i~~~~~~ 59 (304)
|+++++..... ..+++|+|+.|++. ..+ .+++|.|+||||+.|+.+..|
T Consensus 53 GMgq~~~~~~~~~lD~VItNa~IiD~---~GI-~KADIGIkdG~I~gIGkAGNP 102 (121)
T PF00449_consen 53 GMGQSSGATRDEALDLVITNALIIDY---TGI-VKADIGIKDGRIVGIGKAGNP 102 (121)
T ss_dssp TTTB-SSSGTTCC-SEEEEEEEEEET---TEE-EEEEEEEETTEEEEEE-EB-T
T ss_pred CCCcCCCCCccccccEEEeCcEEEec---CCc-EEeeEEeeCCEEEEEeccCCc
Confidence 44455444322 46789999999985 345 578999999999999998764
|
5.1.5 from EC) catalyses the hydrolysis of urea to form ammonia and carbamate. The subunit composition of urease from different sources varies [], but each holoenzyme consists of four structural domains []: three structural domains and a nickel-binding catalytic domain common to amidohydrolases []. Urease is unique among nickel metalloenzymes in that it catalyses a hydrolysis rather than a redox reaction. In Helicobacter pylori, the gamma and beta domains are fused and called the alpha subunit (IPR008223 from INTERPRO). The catalytic subunit (called beta or B) has the same organisation as the Klebsiella alpha subunit. Jack bean (Canavalia ensiformis) urease has a fused gamma-beta-alpha organisation (IPR008221 from INTERPRO). The N-terminal domain is a composite domain and plays a major trimer stabilising role by contacting the catalytic domain of the symmetry related alpha-subunit []. ; GO: 0009039 urease activity, 0016151 nickel ion binding, 0019627 urea metabolic process; PDB: 3LA4_A 2UBP_C 3UBP_C 1UBP_C 1S3T_C 1IE7_C 4UBP_C 1E9Y_B 1E9Z_B 3QGA_O .... |
| >PRK11449 putative deoxyribonuclease YjjV; Provisional | Back alignment and domain information |
|---|
Probab=96.84 E-value=0.017 Score=49.42 Aligned_cols=55 Identities=13% Similarity=0.136 Sum_probs=37.5
Q ss_pred HHHHHHHHHHHHHhCCeeeEEecCChhhHHHHHHhcCCCCCHHHHHHHhCCCCCCeeEEEeccCCcchhc
Q 022028 222 DRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEVN 291 (304)
Q Consensus 222 ~e~l~~~~~~a~~~~~~~~~H~~E~~~~~~~~~~~~g~~~~~~~~l~~~g~l~~~~~~~H~~~l~~~di~ 291 (304)
.+.+++-+++|+++++++.+|+-....+ .++.+.+.+. +.-.+.||..-+.+...
T Consensus 113 ~~vf~~ql~lA~~~~~Pv~iH~r~a~~~-------------~~~il~~~~~--~~~~i~H~fsG~~~~a~ 167 (258)
T PRK11449 113 QWLLDEQLKLAKRYDLPVILHSRRTHDK-------------LAMHLKRHDL--PRTGVVHGFSGSLQQAE 167 (258)
T ss_pred HHHHHHHHHHHHHhCCCEEEEecCccHH-------------HHHHHHhcCC--CCCeEEEcCCCCHHHHH
Confidence 3567888999999999999998654433 3455555443 12357888777765554
|
|
| >COG0084 TatD Mg-dependent DNase [DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
Probab=96.77 E-value=0.028 Score=47.84 Aligned_cols=55 Identities=13% Similarity=0.121 Sum_probs=39.4
Q ss_pred HHHHHHHHHHHHHhCCeeeEEecCChhhHHHHHHhcCCCCCHHHHHHHhCCCCCCeeEEEeccCCcchhc
Q 022028 222 DRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEVN 291 (304)
Q Consensus 222 ~e~l~~~~~~a~~~~~~~~~H~~E~~~~~~~~~~~~g~~~~~~~~l~~~g~l~~~~~~~H~~~l~~~di~ 291 (304)
.+.+++-.++|+++++++.+|.-+..++ .++.|.+.+. +...+.||..=+.+...
T Consensus 111 ~~~F~~ql~lA~~~~lPviIH~R~A~~d-------------~~~iL~~~~~--~~~gi~HcFsGs~e~a~ 165 (256)
T COG0084 111 EEVFEAQLELAKELNLPVIIHTRDAHED-------------TLEILKEEGA--PVGGVLHCFSGSAEEAR 165 (256)
T ss_pred HHHHHHHHHHHHHcCCCEEEEccccHHH-------------HHHHHHhcCC--CCCEEEEccCCCHHHHH
Confidence 4467888999999999999998776554 4455555554 34567888877765554
|
|
| >PRK10812 putative DNAse; Provisional | Back alignment and domain information |
|---|
Probab=96.66 E-value=0.014 Score=50.10 Aligned_cols=56 Identities=11% Similarity=0.144 Sum_probs=36.9
Q ss_pred HHHHHHHHHHHHHhCCeeeEEecCChhhHHHHHHhcCCCCCHHHHHHHhCCCCCCeeEEEeccCCcchhc
Q 022028 222 DRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEVN 291 (304)
Q Consensus 222 ~e~l~~~~~~a~~~~~~~~~H~~E~~~~~~~~~~~~g~~~~~~~~l~~~g~l~~~~~~~H~~~l~~~di~ 291 (304)
.+.+++.+++|+++++++.+|.-....+ .++.|.+.+.-..+ .+.||..-+.+...
T Consensus 110 ~~vf~~ql~lA~e~~~Pv~iH~r~a~~~-------------~l~iL~~~~~~~~~-~v~H~fsG~~~~a~ 165 (265)
T PRK10812 110 QESFRHHIQIGRELNKPVIVHTRDARAD-------------TLAILREEKVTDCG-GVLHCFTEDRETAG 165 (265)
T ss_pred HHHHHHHHHHHHHhCCCeEEEeeCchHH-------------HHHHHHhhcCCCCC-EEEEeecCCHHHHH
Confidence 3467888999999999999998654432 45555555442223 45899866644443
|
|
| >PRK10425 DNase TatD; Provisional | Back alignment and domain information |
|---|
Probab=96.61 E-value=0.018 Score=49.29 Aligned_cols=55 Identities=15% Similarity=0.133 Sum_probs=36.1
Q ss_pred HHHHHHHHHHHHhCCeeeEEecCChhhHHHHHHhcCCCCCHHHHHHHhCCCCCCeeEEEeccCCcchhc
Q 022028 223 RLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEVN 291 (304)
Q Consensus 223 e~l~~~~~~a~~~~~~~~~H~~E~~~~~~~~~~~~g~~~~~~~~l~~~g~l~~~~~~~H~~~l~~~di~ 291 (304)
+.+++-+++|+++++++.+|.-+...+ .++.+.+..-..++ .+.||..-+.+...
T Consensus 108 ~vF~~ql~lA~~~~~Pv~iH~r~a~~~-------------~l~iL~~~~~~~~~-~i~H~fsG~~~~~~ 162 (258)
T PRK10425 108 RAFVAQLAIAAELNMPVFMHCRDAHER-------------FMALLEPWLDKLPG-AVLHCFTGTREEMQ 162 (258)
T ss_pred HHHHHHHHHHHHhCCCeEEEEeCchHH-------------HHHHHHHhccCCCC-eEEEecCCCHHHHH
Confidence 467888999999999999998754433 34444432111123 45688877776665
|
|
| >PF01026 TatD_DNase: TatD related DNase The Pfam entry finds members not in the Prosite definition | Back alignment and domain information |
|---|
Probab=96.44 E-value=0.012 Score=50.33 Aligned_cols=136 Identities=10% Similarity=0.049 Sum_probs=68.9
Q ss_pred HHHHhcCcceeecCCCC--CHHHHHHHHHHcCCeEEeecccccCCCCCCCCcccCChHHHHHHHHHHHHHHcCCCCCCeE
Q 022028 132 IELIHSGVTCFAEAGGQ--HVSEMAKAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIR 209 (304)
Q Consensus 132 ~~~l~~GvTtv~d~~~~--~~~~~~~~~~~~gir~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 209 (304)
..+..+|++.++..+.. ......+.+...+.+.+.+..+. |.+.....++..+...++ ..... ...+.
T Consensus 21 ~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~v~~~~GiH-------P~~~~~~~~~~~~~l~~l-~~~~~--~~~~a 90 (255)
T PF01026_consen 21 ERAREAGVSAIIIVSTDPEDWERVLELASQYPDRVYPALGIH-------PWEAHEVNEEDLEELEEL-INLNR--PKVVA 90 (255)
T ss_dssp HHHHHTTEEEEEEEESSHHHHHHHHHHHHHTTTEEEEEE----------GGGGGGHSHHHHHHHHHH-HHHTS--TTEEE
T ss_pred HHHHHcCCCEEEEcCCCHHHhHHHHHHHhcCCCeEEEEecCC-------cchhhhhhHHHHHHHHHH-HHhcc--cccee
Confidence 45678899998765532 22345555566666554433221 211111112333333333 22221 11211
Q ss_pred ---EEEeeCc----ccCCCHHHHHHHHHHHHHhCCeeeEEecCChhhHHHHHHhcCCCCCHHHHHHHhCCCCCCeeEEEe
Q 022028 210 ---IWFGIRQ----IMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHT 282 (304)
Q Consensus 210 ---~~~~~~~----~~~~~~e~l~~~~~~a~~~~~~~~~H~~E~~~~~~~~~~~~g~~~~~~~~l~~~g~l~~~~~~~H~ 282 (304)
+++.... ....-.+.+++.+++|+++++++.+|+-....+ .++.+.+.+.-+ -..+.||
T Consensus 91 IGEiGLD~~~~~~~~~~~Q~~vF~~ql~lA~~~~~pv~iH~r~a~~~-------------~l~il~~~~~~~-~~~i~H~ 156 (255)
T PF01026_consen 91 IGEIGLDYYWRNEEDKEVQEEVFERQLELAKELNLPVSIHCRKAHEE-------------LLEILKEYGPPN-LRVIFHC 156 (255)
T ss_dssp EEEEEEETTTTSSSGHHHHHHHHHHHHHHHHHHTCEEEEEEESHHHH-------------HHHHHHHTTGGT-SEEEETT
T ss_pred eeeeccCcccccCCcHHHHHHHHHHHHHHHHHhCCcEEEecCCcHHH-------------HHHHHHhccccc-eeEEEec
Confidence 2233211 112234468888999999999999998653222 566677776322 2588899
Q ss_pred ccCCcchhc
Q 022028 283 VWVNHTEVN 291 (304)
Q Consensus 283 ~~l~~~di~ 291 (304)
..-+.++..
T Consensus 157 f~g~~~~~~ 165 (255)
T PF01026_consen 157 FSGSPEEAK 165 (255)
T ss_dssp --S-HHHHH
T ss_pred CCCCHHHHH
Confidence 887776655
|
; InterPro: IPR001130 This family of proteins are related to a large superfamily of metalloenzymes []. TatD, a member of this family has been shown experimentally to be a DNase enzyme []. Allantoinase 3.5.2.5 from EC, N-isopropylammelide isopropyl amidohydrolase 3.5.1 from EC and the SCN1 protein from fission yeast belong to this family.; GO: 0016888 endodeoxyribonuclease activity, producing 5'-phosphomonoesters; PDB: 3E2V_B 1XWY_A 3GUW_D 3RCM_A 1ZZM_A 2XIO_A 1J6O_A 2GZX_A 3IPW_A 2Y1H_A .... |
| >COG1816 Add Adenosine deaminase [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.42 E-value=0.05 Score=48.19 Aligned_cols=154 Identities=16% Similarity=0.132 Sum_probs=84.9
Q ss_pred CChHHHHHHHHHHHHHHHhcCcceee---cCCC-----CCHH--------HHHHHHHHcCCeEEeecccccCCCCCCCCc
Q 022028 118 MTEEDSYISTLLCGIELIHSGVTCFA---EAGG-----QHVS--------EMAKAVELLGLRACLVQSTMDCGEGLPASW 181 (304)
Q Consensus 118 ~~~e~~~~~~~~~~~~~l~~GvTtv~---d~~~-----~~~~--------~~~~~~~~~gir~~~~~~~~d~g~~~~~~~ 181 (304)
.++++++.-+...+..++.+|+-..- +... ...+ .+..++++.|++.-+-....-
T Consensus 78 ~~~~~~~~la~~~~~~~~~~~~vy~Ei~f~p~~~t~~~l~~~~~~e~~~~~~~~~~~~~gi~s~li~~~~r--------- 148 (345)
T COG1816 78 RTEEDFYRLAYEYLEDAAADNVVYAEIRFDPYLHTKRGLSVDTVVEGLIAGFRPAERDFGIHSKLIVCLLR--------- 148 (345)
T ss_pred ccHHHHHHHHHHHHHHHHhcCCeEEEEEeCcchhhhccCCHHHHHHHHHHHHHHHhhccCCccceEEEEEe---------
Confidence 45677788888888999999987752 2211 1112 223334455555422111110
Q ss_pred ccCChHHHHHHHHHHHHHHcCCCCCCeEEEEeeCcc-cCCCHHHHHHHHHHHHHhCCeeeEEecCChhhHHHHHHhcCCC
Q 022028 182 AVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQI-MNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVD 260 (304)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~~~~e~l~~~~~~a~~~~~~~~~H~~E~~~~~~~~~~~~g~~ 260 (304)
.... +...+..+....+... .++ +++..+. ....++....+++++++.|+++.+|+.|.......
T Consensus 149 -~~~~-e~~~~~~~~a~~~~~~---~~~-~~~l~~~e~~~p~~~f~~~f~~~r~~gl~lt~HaGE~~~~~~i-------- 214 (345)
T COG1816 149 -HLGF-ESADEELELALRYRDK---LVT-GVGLAGSESGYPPELFVSLFKLARDNGLKLTIHAGEAGGPESI-------- 214 (345)
T ss_pred -ecCH-HHHHHHHHHHhhcccc---cCc-cCCCCcccccCCHHHHHHHHHHHHHcCceEEEeccccCCcHHH--------
Confidence 0112 2223333333333322 221 2222222 34577888899999999999999999987654432
Q ss_pred CCHHHHHHHhCCCCCCeeEEEeccCCcchhc-------------cccccccccc
Q 022028 261 HGTVTFLDKIEFLQNNLLSAHTVWVNHTEVN-------------CTFGNFKYAV 301 (304)
Q Consensus 261 ~~~~~~l~~~g~l~~~~~~~H~~~l~~~di~-------------~p~sN~~l~~ 301 (304)
.+.+.-.+. + -+.||+.+-++..- ||.||..++.
T Consensus 215 ---~~al~~~~~--~--rI~HGi~~~~d~~L~~~l~~~qI~levCP~SNi~~~~ 261 (345)
T COG1816 215 ---RDALDLLGA--E--RIGHGIRAIEDPELLYRLAERQIPLEVCPLSNIQLGV 261 (345)
T ss_pred ---HHHHHHhch--h--hhccccccccCHHHHHHHHHhCCeeEECCcchhhccc
Confidence 222222222 1 37888888644322 9999987664
|
|
| >PF00962 A_deaminase: Adenosine/AMP deaminase immunodeficiency disease (SCID); InterPro: IPR001365 Adenosine deaminase (3 | Back alignment and domain information |
|---|
Probab=95.91 E-value=0.028 Score=49.98 Aligned_cols=153 Identities=17% Similarity=0.159 Sum_probs=86.3
Q ss_pred ChHHHHHHHHHHHHHHHhcCcceeec---------CCC-CCHH--------HHHHHHHHcCCeEEeecccccCCCCCCCC
Q 022028 119 TEEDSYISTLLCGIELIHSGVTCFAE---------AGG-QHVS--------EMAKAVELLGLRACLVQSTMDCGEGLPAS 180 (304)
Q Consensus 119 ~~e~~~~~~~~~~~~~l~~GvTtv~d---------~~~-~~~~--------~~~~~~~~~gir~~~~~~~~d~g~~~~~~ 180 (304)
++++++..+...+.++.+.||..+-- .++ ...+ .+.++.++.++..-+-....- .
T Consensus 72 ~~e~~~~~~~~~l~~~~~dnV~YlElr~~P~~~~~~~~~~~~~~~~~~i~~~~~~a~~~~~i~~~li~~~~R-~------ 144 (331)
T PF00962_consen 72 TPEDLRRYAYEVLEDFAEDNVVYLELRFSPQFHAQLGGNLSFDEVVEAIIEGIDRAEKEFGIKVRLIISVLR-H------ 144 (331)
T ss_dssp SHHHHHHHHHHHHHHHHHTTEEEEEEEESHHHHHTTTCSSTHHHHHHHHHHHHHHHHHHHTTEEEEEEEEET-T------
T ss_pred cHHHHHHHHHHHHHHHHHcCCeEEEEEeccccccccCCCCCHHHHHHHHHhhhhhccccccccccccccccc-c------
Confidence 57777777888889999999988621 111 1111 223333445644422211111 0
Q ss_pred cccCChHHHHHHHHHHHHHHcCCCCCCeEEEEeeCcc-cCCCHHHHHHHHHHHHHhCCeeeEEecCChhhHHHHHHhcCC
Q 022028 181 WAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQI-MNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKV 259 (304)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~~~~e~l~~~~~~a~~~~~~~~~H~~E~~~~~~~~~~~~g~ 259 (304)
...+..++..++..++... .. +++...+. ....+..+..+++.|++.|+++.+|++|.......
T Consensus 145 ----~~~~~~~~~~~~~~~~~~~--~v--vG~dl~g~E~~~~~~~~~~~~~~a~~~gl~~t~HaGE~~~~~~~------- 209 (331)
T PF00962_consen 145 ----FPDEWAEEIVELASKYPDK--GV--VGFDLAGDEDGGPPLKFAPAFRKAREAGLKLTVHAGETGGPEHI------- 209 (331)
T ss_dssp ----STHHHHHHHHHHHHHTTTT--TE--EEEEEESSTTSTTGGGHHHHHHHHHHTT-EEEEEESSSSTHHHH-------
T ss_pred ----chHHHHHHHHHHHhhcccc--eE--EEEEecCCcccCchHHHHHHHhhhcccceeecceecccCCcccc-------
Confidence 1234445566666666542 23 34444443 33344457779999999999999999998864321
Q ss_pred CCCHHHHHHHhCCCCCCeeEEEeccCCcchh--c-----------cccccccccc
Q 022028 260 DHGTVTFLDKIEFLQNNLLSAHTVWVNHTEV--N-----------CTFGNFKYAV 301 (304)
Q Consensus 260 ~~~~~~~l~~~g~l~~~~~~~H~~~l~~~di--~-----------~p~sN~~l~~ 301 (304)
.+.+.. |+.+ =+.||+.+..+.- + ||+||..++.
T Consensus 210 ----~~ai~~---l~~~-RIgHG~~~~~~p~l~~~~~~~~I~iEvcptSN~~~~~ 256 (331)
T PF00962_consen 210 ----RDAILL---LGAD-RIGHGVRLIKDPELLELLAERQIPIEVCPTSNVQLGA 256 (331)
T ss_dssp ----HHHHHT---ST-S-EEEE-GGGGGSHHHHHHHHHTT-EEEE-HHHHHHTTS
T ss_pred ----cchhhh---ccce-eecchhhhhhhhHHHHHHHHhCCCeeeCCCcCcccce
Confidence 122222 3422 3999999975442 1 9999999864
|
5.4.4 from EC) catalyzes the hydrolytic deamination of adenosine into inosine and AMP deaminase (3.5.4.6 from EC) catalyzes the hydrolytic deamination of AMP into IMP. It has been shown [] that these two enzymes share three regions of sequence similarities; these regions are centred on residues which are proposed to play an important role in the catalytic mechanism of these two enzymes.; GO: 0019239 deaminase activity, 0009168 purine ribonucleoside monophosphate biosynthetic process; PDB: 3LGG_B 3LGD_B 2AMX_B 3EWD_A 2QVN_A 2PGF_A 2PGR_A 3EWC_A 1W1I_G 1O5R_A .... |
| >cd01311 PDC_hydrolase 2-pyrone-4,6-dicarboxylic acid (PDC) hydrolase hydrolyzes PDC to yield 4-oxalomesaconic acid (OMA) or its tautomer, 4-carboxy-2-hydroxymuconic acid (CHM) | Back alignment and domain information |
|---|
Probab=95.04 E-value=1.1 Score=38.35 Aligned_cols=51 Identities=16% Similarity=0.152 Sum_probs=35.1
Q ss_pred CHHHHHHHHHHHHHhCCeeeEEecCChhhHHHHHHhcCCCCCHHHHHHHhCCCCCCeeEEEeccCC
Q 022028 221 TDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVN 286 (304)
Q Consensus 221 ~~e~l~~~~~~a~~~~~~~~~H~~E~~~~~~~~~~~~g~~~~~~~~l~~~g~l~~~~~~~H~~~l~ 286 (304)
+++.+..+.+.+.++|+.+.+|+..... .. ..+.+.+. +-++++.|+....
T Consensus 108 ~~~~~~~~~~~~~~~gl~v~~~~~~~~l--~~----------l~~l~~~~---~l~ivldH~G~p~ 158 (263)
T cd01311 108 NKDELDEIAKRAAELGWHVQVYFDAVDL--PA----------LLPFLQKL---PVAVVIDHFGRPD 158 (263)
T ss_pred CHHHHHHHHHHHHHcCCEEEEEeCHhhH--HH----------HHHHHHHC---CCCEEEECCCCCC
Confidence 6677788999999999999999853221 11 23344444 3478899987654
|
This reaction is part of the protocatechuate (PCA) 4,5-cleavage pathway. PCA is one of the most important intermediate metabolites in the bacterial pathways for various phenolic compounds, including lignin, which is the most abundant aromatic material in nature. |
| >KOG1097 consensus Adenine deaminase/adenosine deaminase [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
Probab=94.89 E-value=0.15 Score=45.58 Aligned_cols=78 Identities=15% Similarity=0.155 Sum_probs=52.5
Q ss_pred EEEEeeCccc--CCCHHHHHHHHHHHHHhCCeeeEEecCChhhHHHHHHhcCCCCCHHHHHHHhCCCC-CCeeEEEeccC
Q 022028 209 RIWFGIRQIM--NATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQ-NNLLSAHTVWV 285 (304)
Q Consensus 209 ~~~~~~~~~~--~~~~e~l~~~~~~a~~~~~~~~~H~~E~~~~~~~~~~~~g~~~~~~~~l~~~g~l~-~~~~~~H~~~l 285 (304)
.+++...+.. .-+...+..+...+.+.|+++.+|++|+...-+ .++-+.+ +|+ .| +.|++.+
T Consensus 211 VvGidL~G~e~~~~p~~~f~~vl~~~~~~gi~~t~HaGE~~~~~~-----------~v~~~LD--~l~~~R--IGHG~~l 275 (399)
T KOG1097|consen 211 VVGIDLVGQEDLGGPLSLFLEVLAKAPAKGIHLTFHAGETNGGAS-----------VVKNALD--LLGTER--IGHGYFL 275 (399)
T ss_pred EEEEecCCCCCCCCChhhhHHHHHhhhhcCCcEEEEccccCCChH-----------HHHHHHH--hhCCcc--ccCceec
Confidence 3456655543 234445666777777789999999999962222 2333333 454 34 8999999
Q ss_pred Ccch--hc-----------cccccccccc
Q 022028 286 NHTE--VN-----------CTFGNFKYAV 301 (304)
Q Consensus 286 ~~~d--i~-----------~p~sN~~l~~ 301 (304)
..++ +. ||.||.+++.
T Consensus 276 ~~dp~L~~~~k~~nI~lEiCP~SN~vl~~ 304 (399)
T KOG1097|consen 276 TKDPELINLLKSRNIALEICPISNQVLGL 304 (399)
T ss_pred cCCHHHHHHHHhcCceEEEccchhhheec
Confidence 9988 32 9999999875
|
|
| >PF12890 DHOase: Dihydro-orotase-like; InterPro: IPR024403 This entry represents a small family of dihydro-orotase-like proteins from bacteria | Back alignment and domain information |
|---|
Probab=93.66 E-value=0.021 Score=42.74 Aligned_cols=17 Identities=41% Similarity=0.958 Sum_probs=15.3
Q ss_pred CCEeeccccccCccchh
Q 022028 75 SQILLPGFVNTHVHTSQ 91 (304)
Q Consensus 75 g~iv~PG~ID~H~Hl~~ 91 (304)
|++++|||||.|+|+..
T Consensus 1 ~kli~~g~vd~hVhlre 17 (142)
T PF12890_consen 1 GKLILPGLVDVHVHLRE 17 (142)
T ss_pred Cceeehhhhhhhhhhhc
Confidence 68999999999999964
|
|
| >TIGR01431 adm_rel adenosine deaminase-related growth factor | Back alignment and domain information |
|---|
Probab=93.23 E-value=0.64 Score=43.47 Aligned_cols=82 Identities=10% Similarity=0.051 Sum_probs=48.2
Q ss_pred EEEEeeCccc--CCCHHHHHHHHH-HHHHhCCeeeEEecCChhhHHHHHHhcCCCCCHHHHHHHhCCCCCCeeEEEeccC
Q 022028 209 RIWFGIRQIM--NATDRLLLETRD-MAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWV 285 (304)
Q Consensus 209 ~~~~~~~~~~--~~~~e~l~~~~~-~a~~~~~~~~~H~~E~~~~~~~~~~~~g~~~~~~~~l~~~g~l~~~~~~~H~~~l 285 (304)
.+++...+.. ..+...+...+. ++++.++++.+|+.|+... |.. ..-...+.. +|+.+ =+.||+.+
T Consensus 290 vvGfDL~G~E~~g~pl~~f~~~~~~~~~~~gl~~t~HAGE~~~~--------g~~-~d~nl~dAI-lLg~~-RIGHG~~l 358 (479)
T TIGR01431 290 VAGFDLVGQEDKGRSLLDFIDALLGPSDKEKLPYFFHAGETNWQ--------GTT-VDENLIDAL-LLNTT-RIGHGFAL 358 (479)
T ss_pred EEEEeccCCCCCCCCHHHHHHHHHHHHHhCCCCEEEecCCcCCC--------CCC-chhHHHHHH-HcCCc-cccCcccc
Confidence 3456666654 334555544544 5666899999999998631 100 001111222 34432 28999999
Q ss_pred Ccchhc-------------cccccccccc
Q 022028 286 NHTEVN-------------CTFGNFKYAV 301 (304)
Q Consensus 286 ~~~di~-------------~p~sN~~l~~ 301 (304)
..+... ||.||..++.
T Consensus 359 ~~~P~l~~~vke~~I~lEvCP~SN~~l~~ 387 (479)
T TIGR01431 359 VKHPLVLQMLKERNIAVEVNPISNQVLQL 387 (479)
T ss_pred cCCHHHHHHHHHhCCeEEECccchhhhcc
Confidence 854322 9999998864
|
Members of this family have been described as secreted proteins with growth factor activity and regions of adenosine deaminase homology in insects, mollusks, and vertebrates. |
| >COG5016 Pyruvate/oxaloacetate carboxyltransferase [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=85.81 E-value=15 Score=33.37 Aligned_cols=105 Identities=13% Similarity=0.020 Sum_probs=59.6
Q ss_pred HHHHHHHhcCcceeecCCC----CCHHHHHHHHHHcCCeEEeecccccCCCCCCCCcccCChHHHHHHHHHHHHHHcCCC
Q 022028 129 LCGIELIHSGVTCFAEAGG----QHVSEMAKAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAA 204 (304)
Q Consensus 129 ~~~~~~l~~GvTtv~d~~~----~~~~~~~~~~~~~gir~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (304)
..+..+.++|++.|+-|.. .+....++++++.|.+.-...+ ++. +|. ..++...++.++....+
T Consensus 102 ~Fv~ka~~nGidvfRiFDAlND~RNl~~ai~a~kk~G~h~q~~i~-YT~----sPv-------Ht~e~yv~~akel~~~g 169 (472)
T COG5016 102 KFVEKAAENGIDVFRIFDALNDVRNLKTAIKAAKKHGAHVQGTIS-YTT----SPV-------HTLEYYVELAKELLEMG 169 (472)
T ss_pred HHHHHHHhcCCcEEEechhccchhHHHHHHHHHHhcCceeEEEEE-ecc----CCc-------ccHHHHHHHHHHHHHcC
Confidence 3456678999999986643 3455667888888886533222 221 221 22334455555555554
Q ss_pred CCCeEEEEeeCcccCCCHHHHHHHHHHHH-HhCCeeeEEecCChh
Q 022028 205 DGRIRIWFGIRQIMNATDRLLLETRDMAR-EFKTGIHMHVAEIPY 248 (304)
Q Consensus 205 ~~~i~~~~~~~~~~~~~~e~l~~~~~~a~-~~~~~~~~H~~E~~~ 248 (304)
.+.|.+ .-.+- -.+|....+++...+ +.++++.+|.+.+..
T Consensus 170 ~DSIci--KDmaG-lltP~~ayelVk~iK~~~~~pv~lHtH~TsG 211 (472)
T COG5016 170 VDSICI--KDMAG-LLTPYEAYELVKAIKKELPVPVELHTHATSG 211 (472)
T ss_pred CCEEEe--ecccc-cCChHHHHHHHHHHHHhcCCeeEEecccccc
Confidence 454431 11111 235554444554444 579999999988864
|
|
| >TIGR00856 pyrC_dimer dihydroorotase, homodimeric type | Back alignment and domain information |
|---|
Probab=84.64 E-value=12 Score=33.43 Aligned_cols=24 Identities=4% Similarity=0.057 Sum_probs=20.1
Q ss_pred CHHHHHHHHHHHHHhCCeeeEEec
Q 022028 221 TDRLLLETRDMAREFKTGIHMHVA 244 (304)
Q Consensus 221 ~~e~l~~~~~~a~~~~~~~~~H~~ 244 (304)
++..+..+++.++++|+++.+|+-
T Consensus 113 dd~~l~~~~e~~~e~g~~v~vHaE 136 (341)
T TIGR00856 113 DIDAIMPVLEAMEKIGLPLLLHGE 136 (341)
T ss_pred CHHHHHHHHHHHHHcCCeEEEeec
Confidence 346777899999999999999963
|
This homodimeric form of dihydroorotase is less common in microbial genomes than a related dihydroorotase that appears in a complex with aspartyltranscarbamoylase or as a homologous domain in multifunctional proteins of pyrimidine biosynthesis in higher eukaryotes. |
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 304 | ||||
| 3hpa_A | 479 | Crystal Structure Of An Amidohydrolase Gi:44264246 | 2e-22 | ||
| 4dyk_A | 451 | Crystal Structure Of An Adenosine Deaminase From Ps | 1e-18 | ||
| 3lnp_A | 468 | Crystal Structure Of Amidohydrolase Family Protein | 3e-16 | ||
| 1p1m_A | 406 | Structure Of Thermotoga Maritima Amidohydrolase Tm0 | 6e-15 | ||
| 4dzh_A | 472 | Crystal Structure Of An Adenosine Deaminase From Xa | 1e-14 | ||
| 1j6p_A | 418 | Crystal Structure Of Metal-Dependent Hydrolase Of C | 5e-14 | ||
| 4f0r_A | 447 | Crystal Structure Of An Adenosine Deaminase Homolog | 4e-10 | ||
| 2paj_A | 492 | Crystal Structure Of An Amidohydrolase From An Envi | 5e-10 | ||
| 2uz9_A | 476 | Human Guanine Deaminase (Guad) In Complex With Zinc | 3e-08 | ||
| 2i9u_A | 439 | Crystal Structure Of Guanine Deaminase From C. Acet | 2e-07 | ||
| 3e0l_A | 455 | Computationally Designed Ammelide Deaminase Length | 2e-06 | ||
| 2ood_A | 475 | Crystal Structure Of Guanine Deaminase From Bradyrh | 3e-05 | ||
| 3ls9_A | 456 | Crystal Structure Of Atrazine Chlorohydrolase Trzn | 4e-05 | ||
| 3lsb_A | 456 | Crystal Structure Of The Mutant E241q Of Atrazine C | 1e-04 |
| >pdb|3HPA|A Chain A, Crystal Structure Of An Amidohydrolase Gi:44264246 From An Evironmental Sample Of Sargasso Sea Length = 479 | Back alignment and structure |
|
| >pdb|4DYK|A Chain A, Crystal Structure Of An Adenosine Deaminase From Pseudomonas Aeruginosa Pao1 (Target Nysgrc-200449) With Bound Zn Length = 451 | Back alignment and structure |
|
| >pdb|3LNP|A Chain A, Crystal Structure Of Amidohydrolase Family Protein Olei01672_1_465 From Oleispira Antarctica Length = 468 | Back alignment and structure |
|
| >pdb|1P1M|A Chain A, Structure Of Thermotoga Maritima Amidohydrolase Tm0936 Bound To Ni And Methionine Length = 406 | Back alignment and structure |
|
| >pdb|4DZH|A Chain A, Crystal Structure Of An Adenosine Deaminase From Xanthomonas Campestris (Target Nysgrc-200456) With Bound Zn Length = 472 | Back alignment and structure |
|
| >pdb|1J6P|A Chain A, Crystal Structure Of Metal-Dependent Hydrolase Of CytosinedemaniaseCHLOROHYDROLASE FAMILY (TM0936) FROM THERMOTOGA Maritima At 1.9 A Resolution Length = 418 | Back alignment and structure |
|
| >pdb|4F0R|A Chain A, Crystal Structure Of An Adenosine Deaminase Homolog From Chromobacterium Violaceum (Target Nysgrc-019589) Bound Zn And 5'- Methylthioadenosine (Unproductive Complex) Length = 447 | Back alignment and structure |
|
| >pdb|2PAJ|A Chain A, Crystal Structure Of An Amidohydrolase From An Environmental Sample Of Sargasso Sea Length = 492 | Back alignment and structure |
|
| >pdb|2UZ9|A Chain A, Human Guanine Deaminase (Guad) In Complex With Zinc And Its Product Xanthine. Length = 476 | Back alignment and structure |
|
| >pdb|2I9U|A Chain A, Crystal Structure Of Guanine Deaminase From C. Acetobutylicum With Bound Guanine In The Active Site Length = 439 | Back alignment and structure |
|
| >pdb|3E0L|A Chain A, Computationally Designed Ammelide Deaminase Length = 455 | Back alignment and structure |
|
| >pdb|2OOD|A Chain A, Crystal Structure Of Guanine Deaminase From Bradyrhizobium Japonicum Length = 475 | Back alignment and structure |
|
| >pdb|3LS9|A Chain A, Crystal Structure Of Atrazine Chlorohydrolase Trzn From Arthrobacter Aurescens Tc1 Complexed With Zinc Length = 456 | Back alignment and structure |
|
| >pdb|3LSB|A Chain A, Crystal Structure Of The Mutant E241q Of Atrazine Chlorohydrolase Trzn From Arthrobacter Aurescens Tc1 Complexed With Zinc And Ametrin Length = 456 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 304 | |||
| 3lnp_A | 468 | Amidohydrolase family protein OLEI01672_1_465; TIM | 4e-87 | |
| 3h4u_A | 479 | Amidohydrolase; signature of Zn ligands, structura | 9e-86 | |
| 4dzh_A | 472 | Amidohydrolase; adenosine deaminase, nysgrc, struc | 8e-85 | |
| 4dyk_A | 451 | Amidohydrolase; adenosine deaminase, nysgrc, struc | 4e-84 | |
| 4f0r_A | 447 | 5-methylthioadenosine/S-adenosylhomocysteine DEAM; | 1e-83 | |
| 1p1m_A | 406 | Hypothetical protein TM0936; putative metal depend | 1e-81 | |
| 3ls9_A | 456 | Triazine hydrolase; atrazine chlorohydrolase TRZN; | 9e-81 | |
| 2paj_A | 492 | Putative cytosine/guanine deaminase; NYSGXRC, PSI- | 5e-78 | |
| 3v7p_A | 427 | Amidohydrolase family protein; iron binding site, | 1e-70 | |
| 2imr_A | 420 | Hypothetical protein DR_0824; zinc, NYSGXRC, PSI2, | 3e-58 | |
| 2ood_A | 475 | BLR3880 protein; PSI-II, PSI-2, guanine deaminase, | 9e-52 | |
| 2i9u_A | 439 | Cytosine/guanine deaminase related protein; protei | 3e-51 | |
| 4aql_A | 476 | Guanine deaminase; hydrolase, purine metabolism; H | 1e-49 | |
| 3mdu_A | 453 | N-formimino-L-glutamate iminohydrolase; amonohydra | 6e-45 | |
| 4f0l_A | 458 | Amidohydrolase; ssgcid, structural genomics, seatt | 3e-44 | |
| 2bb0_A | 421 | Imidazolonepropionase; TIM barrel, hydrolase; 2.00 | 2e-33 | |
| 2puz_A | 419 | Imidazolonepropionase; NYSGXRC, PSI-2, N-formimino | 4e-33 | |
| 1ra0_A | 430 | Cytosine deaminase; alpha-beta barrel, hexamer, co | 3e-20 | |
| 2q09_A | 416 | Imidazolonepropionase; 9252H, NYSGXRC, 3-(2, 5-dio | 7e-18 | |
| 2qt3_A | 403 | N-isopropylammelide isopropyl amidohydrolase; N-is | 6e-17 | |
| 2ogj_A | 417 | Dihydroorotase; TIM barrel, binuclear zinc, imidaz | 6e-14 | |
| 2vun_A | 386 | Enamidase; nicotinate degradation, binuclear metal | 2e-12 | |
| 3icj_A | 534 | Uncharacterized metal-dependent hydrolase; structu | 3e-11 | |
| 2vhl_A | 396 | N-acetylglucosamine-6-phosphate deacetylase; N- ac | 5e-10 | |
| 2p9b_A | 458 | Possible prolidase; protein structure initiative I | 2e-09 | |
| 3be7_A | 408 | Zn-dependent arginine carboxypeptidase; unknown so | 4e-09 | |
| 3ggm_A | 81 | Uncharacterized protein BT9727_2919; bacillus cere | 5e-09 | |
| 3iv8_A | 381 | N-acetylglucosamine-6-phosphate deacetylase; IDP01 | 1e-08 | |
| 3gnh_A | 403 | L-lysine, L-arginine carboxypeptidase CC2672; N-me | 3e-08 | |
| 2qs8_A | 418 | XAA-Pro dipeptidase; amidohydrolase, TIM barrel, p | 5e-08 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 5e-08 | |
| 3nqb_A | 608 | Adenine deaminase 2; PSI-II, structural genomics, | 9e-08 | |
| 3feq_A | 423 | Putative amidohydrolase; unknown source, sargasso | 1e-07 | |
| 1yrr_A | 382 | N-acetylglucosamine-6-phosphate deacetylase; (beta | 1e-07 | |
| 2gwn_A | 452 | Dihydroorotase; zinc-binding prote structural geno | 1e-07 | |
| 3ooq_A | 396 | Amidohydrolase; structural genomics, protein struc | 3e-07 | |
| 2r8c_A | 426 | Putative amidohydrolase; unknown source, sargasso | 3e-07 | |
| 3hm7_A | 448 | Allantoinase; metallo-dependent hydrolase, protein | 6e-07 | |
| 1o12_A | 376 | N-acetylglucosamine-6-phosphate deacetylase; struc | 8e-07 | |
| 1xrt_A | 467 | Dihydroorotase, dhoase; amidohydrolase, metalloenz | 8e-07 | |
| 3mpg_A | 428 | Dihydroorotase, dhoase; hydrolase; 2.60A {Bacillus | 4e-06 | |
| 1gkr_A | 458 | Hydantoinase, non-ATP dependent L-selective hydant | 5e-06 | |
| 3e74_A | 473 | Allantoinase; (beta/alpha)8-barrel domain, small b | 6e-06 | |
| 3gri_A | 424 | Dihydroorotase, dhoase; hydrolase, IDP00795, metal | 6e-06 | |
| 1gkp_A | 458 | Hydantoinase; hydrolase, dihydropyrimidinase, cycl | 8e-06 | |
| 1onw_A | 390 | Isoaspartyl dipeptidase; amidohydrolase, hydrolase | 9e-06 | |
| 3dc8_A | 490 | Dihydropyrimidinase; TIM-barrel, hydrolase; HET: K | 9e-06 | |
| 2fty_A | 559 | Dihydropyrimidinase; alpha/beta barrel, beta-sandw | 1e-05 | |
| 2ftw_A | 521 | Dihydropyrimidine amidohydrolase; (beta-alpha)8-ba | 1e-05 | |
| 3sfw_A | 461 | Dihydropyrimidinase; hydrolase, zinc binding; HET: | 2e-05 | |
| 1rk6_A | 496 | D-aminoacylase; TIM barrel, beta barrel, insertion | 3e-05 | |
| 2z00_A | 426 | Dihydroorotase; zinc binding protein, hydrolase, m | 3e-05 | |
| 1nfg_A | 457 | D-hydantoinase; TIM barrel, hydrolase; HET: KCX; 2 | 3e-05 | |
| 2vr2_A | 541 | Dihydropyrimidinase; hydantoinase, metal-binding, | 4e-05 | |
| 2vm8_A | 501 | Dihydropyrimidinase-related protein 2; neurogenesi | 2e-04 | |
| 2ics_A | 379 | Adenine deaminase; TIM barrel, binuclear zinc, ade | 6e-04 | |
| 3gip_A | 480 | N-acyl-D-glutamate deacylase; amidohydrolase famil | 7e-04 |
| >3lnp_A Amidohydrolase family protein OLEI01672_1_465; TIM barrel, beta-fold, structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.10A {Oleispira antarctica} Length = 468 | Back alignment and structure |
|---|
Score = 267 bits (685), Expect = 4e-87
Identities = 68/299 (22%), Positives = 124/299 (41%), Gaps = 26/299 (8%)
Query: 4 NSSGGGSSSGSLGSSSTMILHNAVIVTMD------KESRVFRNGGVFVVQDRIKAIGQSA 57
+ S + + + +++ I+ ++ S + + + + I AI +
Sbjct: 8 SESNLAQRQSQPKAHADLRINSHWIIPIENTTDHNLVSNILIDHCLLIKDGIILAIEPQS 67
Query: 58 DILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIADDVDLMTWLHDRIWPYESN 117
A + +DL Q+L+PG+VN H H + L +G+ADD+ LMTWL + +WP E+
Sbjct: 68 SCQIP----ATETLDLGQQVLMPGWVNAHGHAAMSLFRGLADDLPLMTWLQEHVWPAEAQ 123
Query: 118 MT-EEDSYISTLLCGIELIHSGVTCFAEAGGQHVSEMAKAVELLGLRACLVQSTMDCGEG 176
E T L E+I SG T FA+ + + +A G+RA +D
Sbjct: 124 HVDEHFVKQGTELAIAEMIQSGTTTFADMYF-YPQQSGEAALAAGIRAVCFAPVLD---- 178
Query: 177 LPASWAVRTTDDCIQSQKEL---YAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAR 233
P ++A + D+ I+ E + H G ++I FG +D L E ++
Sbjct: 179 FPTNYA-QNADEYIRKAIECNDRFNNHPMNEQGLVQIGFGPHAPYTVSDEPLKEITMLSD 237
Query: 234 EFKTGIHMHVAEIPYENQVVMDTRKVDHG--TVTFLDKIEFLQNNLLSAHTVWVNHTEV 290
+ + +H+ E +E ++T L I FL + H V+ ++
Sbjct: 238 QLDMPVQIHLHETDFEVSESLET----FNKRPTQRLADIGFLNERVSCVHMTQVDDGDI 292
|
| >4dzh_A Amidohydrolase; adenosine deaminase, nysgrc, structural GENO YORK structural genomics research consortium; 1.55A {Xanthomonas campestris PV} Length = 472 | Back alignment and structure |
|---|
Score = 261 bits (670), Expect = 8e-85
Identities = 64/273 (23%), Positives = 109/273 (39%), Gaps = 17/273 (6%)
Query: 21 MILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLP 80
+++ +V ++ + V + V V I A+ +AD +F+ + + L+P
Sbjct: 16 LLIEAGYVVPIEPHAVVLEDHAVAVSNGVIVAVLPTADARVRFA--PARTVSRPDAALMP 73
Query: 81 GFVNTHVHTSQQLAKGIADDVDLMTWLHDRIWPYESNMT-EEDSYISTLLCGIELIHSGV 139
G VN H H L +G+ADD+ LM WL IWP E+ + E T L E++ G
Sbjct: 74 GLVNAHTHNPMTLLRGVADDLPLMVWLQQHIWPVEAAVIGPEFVADGTTLAIAEMLRGGT 133
Query: 140 TCFAEAGGQHVSEMAKAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYAK 199
TC E A + G RA + +D P +WA + D+ EL+ +
Sbjct: 134 TCVNE-NYFFADVQAAVYKQHGFRALVGAVIID----FPTAWA-SSDDEYFARAGELHDQ 187
Query: 200 HHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKV 259
D I F D R +A + +H+H E E +
Sbjct: 188 WRD--DPLISTAFAPHAPYTVNDANFERVRMLADQLDMPVHLHTHETAQEVADSVAQ--- 242
Query: 260 DHG--TVTFLDKIEFLQNNLLSAHTVWVNHTEV 290
+G + LD++ + + L++ H + E+
Sbjct: 243 -YGQRPLARLDRLGLVNDRLIAVHMTQLTEAEI 274
|
| >4dyk_A Amidohydrolase; adenosine deaminase, nysgrc, structural GENO PSI-biology, NEW YORK structural genomics research consorti hydrolase; 2.00A {Pseudomonas aeruginosa} Length = 451 | Back alignment and structure |
|---|
Score = 259 bits (664), Expect = 4e-84
Identities = 72/273 (26%), Positives = 119/273 (43%), Gaps = 18/273 (6%)
Query: 21 MILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLP 80
++L IV ++ V R+ + + +I + ++ A +I +L +L P
Sbjct: 10 LLLLPTWIVPVEPAGVVLRDHALGIRDGQIALVAPREQAMRHG---ATEIRELPGMLLAP 66
Query: 81 GFVNTHVHTSQQLAKGIADDVDLMTWLHDRIWPYESNMTEEDS-YISTLLCGIELIHSGV 139
G VN H H++ L +G+ADD+ LMTWL D IWP E ED T L E + G+
Sbjct: 67 GLVNAHGHSAMSLFRGLADDLPLMTWLQDHIWPAEGQWVSEDFIRDGTELAIAEQVKGGI 126
Query: 140 TCFAEAGGQHVSEMAKAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYAK 199
TCF++ + + V G+RA + +D P A R + + I+ L+
Sbjct: 127 TCFSDMYF-YPQAICGVVHDSGVRAQVAIPVLD----FPIPGA-RDSAEAIRQGMALFDD 180
Query: 200 HHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKV 259
H RIRI FG +D L + + E I MHV E +E + M+
Sbjct: 181 LKH--HPRIRIAFGPHAPYTVSDDKLEQILVLTEELDASIQMHVHETAFEVEQAMER--- 235
Query: 260 DHG--TVTFLDKIEFLQNNLLSAHTVWVNHTEV 290
+G + L ++ L + H V++ ++
Sbjct: 236 -NGERPLARLHRLGLLGPRFQAVHMTQVDNDDL 267
|
| >4f0r_A 5-methylthioadenosine/S-adenosylhomocysteine DEAM; structural genomics, PSI-biology; HET: MSE MTA; 1.80A {Chromobacterium violaceum} PDB: 4f0s_A* Length = 447 | Back alignment and structure |
|---|
Score = 258 bits (661), Expect = 1e-83
Identities = 68/272 (25%), Positives = 119/272 (43%), Gaps = 18/272 (6%)
Query: 22 ILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPG 81
I+ I+T++ + V N + + +I AI +AD AD+ ++L +L+PG
Sbjct: 9 IISARWIITVETDGEVLENHAIAIRDGKIAAIIPAADAAGLE---ADERLELPDHVLMPG 65
Query: 82 FVNTHVHTSQQLAKGIADDVDLMTWLHDRIWPYESNMTEEDS-YISTLLCGIELIHSGVT 140
+N H H++ L +G+ADD LM WL + IWP E +D + +LL E+I G T
Sbjct: 66 LINLHGHSAMSLLRGLADDKALMDWLTNYIWPTEGKHVHDDFVFDGSLLAMGEMIRGGTT 125
Query: 141 CFAEAGGQHVSEMAKAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYAKH 200
+ + + +A+A G+R + S ++ P ++A DD I K + +
Sbjct: 126 TINDMYF-YNAAVARAGLASGMRTFVGCSILE----FPTNYA-SNADDYI--AKGMAERS 177
Query: 201 HHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVD 260
+ + +D + +A + IH H+ E E +
Sbjct: 178 QFLGEDLLTFTLAPHAPYTVSDDTFRKVVTLAEQEDMLIHCHIHETADEVNNSVKE---- 233
Query: 261 HG--TVTFLDKIEFLQNNLLSAHTVWVNHTEV 290
HG + L ++ L L++AH V +N EV
Sbjct: 234 HGQRPLARLQRLGLLSPRLVAAHMVHLNDAEV 265
|
| >1p1m_A Hypothetical protein TM0936; putative metal dependent hydrolase, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: b.92.1.4 c.1.9.9 PDB: 2plm_A* 1j6p_A Length = 406 | Back alignment and structure |
|---|
Score = 251 bits (644), Expect = 1e-81
Identities = 59/270 (21%), Positives = 106/270 (39%), Gaps = 33/270 (12%)
Query: 21 MILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLP 80
MI+ N +I+ G V + IK + Q +DL ++++P
Sbjct: 1 MIIGNCLILKDFS--SEPFWGAVEIENGTIKRVLQGE---------VKVDLDLSGKLVMP 49
Query: 81 GFVNTHVHTSQQLAKGIADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVT 140
NTH H L +G+A+D+ WL ++ P E +TE+ +Y T+L +E+ G+
Sbjct: 50 ALFNTHTHAPMTLLRGVAEDLSFEEWLFSKVLPIEDRLTEKMAYYGTILAQMEMARHGIA 109
Query: 141 CFAEAGGQHVSEMAKAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYAKH 200
F + H +AKAV G+RA L + +D ++ +LY +
Sbjct: 110 GFVDMYF-HEEWIAKAVRDFGMRALLTRGLVDSNG---------DDGGRLEENLKLYNE- 158
Query: 201 HHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVD 260
+ +GRI + FG ++ L D A+ + +H+ E E
Sbjct: 159 WNGFEGRIFVGFGPHSPYLCSEEYLKRVFDTAKSLNAPVTIHLYETSKEEY--------- 209
Query: 261 HGTVTFLDKIEFLQNNLLSAHTVWVNHTEV 290
+ + I + ++AH V +
Sbjct: 210 --DLEDILNIGLKEVKTIAAHCVHLPERYF 237
|
| >3ls9_A Triazine hydrolase; atrazine chlorohydrolase TRZN; 1.40A {Arthrobacter aurescens} PDB: 3lsc_A* 3lsb_A* Length = 456 | Back alignment and structure |
|---|
Score = 250 bits (641), Expect = 9e-81
Identities = 57/291 (19%), Positives = 102/291 (35%), Gaps = 29/291 (9%)
Query: 21 MIL-HNA-VIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQIL 78
MIL ++T D + R + + + +I A+G+ + ID + I
Sbjct: 1 MILIRGLTRVITFDDQERELEDADILIDGPKIVAVGKDLSDRS-----VSRTIDGRGMIA 55
Query: 79 LPGFVNTHVHTSQQLAKGIA--DDVDLMTWLHDRI-----WPYESNMTEEDSYISTLLCG 131
LPG +N+H H + + I + V + +WL + W + +
Sbjct: 56 LPGLINSHQHLYEGAMRAIPQLERVTMASWLEGVLTRSAGWWRDGKFGPDVIREVARAVL 115
Query: 132 IELIHSGVTCFAE--------AGGQHVSEMAKAVELLGLRACLVQSTMDCGE---GLPAS 180
+E + G+T A+ ++ +A LG+R +S+M G+ G
Sbjct: 116 LESLLGGITTVADQHLFFPGATADSYIDATIEAATDLGIRFHAARSSMTLGKSEGGFCDD 175
Query: 181 WAVRTTDDCIQSQKELYAKHHHAA-DGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGI 239
V D +Q L ++H G +RI G + L MA ++ +
Sbjct: 176 LFVEPVDRVVQHCLGLIDQYHEPEPFGMVRIALGPCGVPYDKPELFEAFAQMAADYDVRL 235
Query: 240 HMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEV 290
H H E FL+K + + + AH V E+
Sbjct: 236 HTHFYEPLDAGMSD---HLYGMTPWRFLEKHGWASDRVWLAHAVVPPREEI 283
|
| >2paj_A Putative cytosine/guanine deaminase; NYSGXRC, PSI-II, amidohydrolase, sargasso SEA, enviro sample, structural genomics; 2.70A {Unidentified} SCOP: b.92.1.4 c.1.9.9 Length = 492 | Back alignment and structure |
|---|
Score = 244 bits (626), Expect = 5e-78
Identities = 65/303 (21%), Positives = 117/303 (38%), Gaps = 33/303 (10%)
Query: 11 SSGSLGSSSTMILHNAVIVTMDK-----ESRVFRNGGVFVVQDRIKAIGQSADILQQFSQ 65
S + + + ++ NA + + + +V D I AIG A +
Sbjct: 2 SLTTYDTQPSTLIRNAAAIMTGGRGTADDPSRVPGPDIRIVGDTIDAIGALAP------R 55
Query: 66 MADQIIDLQSQILLPGFVNTHVHTSQQLAKGI--ADDVDLMTWLHDRIWPYESNMTEEDS 123
+ I+D ++ P +VNTH H Q L KG D L WL + + + E
Sbjct: 56 PGETIVDATDCVIYPAWVNTHHHLFQSLLKGEPAGLDATLTPWLAATPYRFRALFDERRF 115
Query: 124 YISTLLCGIELIHSGVTCFAE--------AGGQHVSEMAKAVELLGLRACLVQSTMDCGE 175
++ + IEL SG A+ + + + E LGLR L++
Sbjct: 116 RLAARIGLIELARSGCATVADHNYVYYPGMPFDSSAILFEEAEKLGLRFVLLRGGATQTR 175
Query: 176 ----GLPASWAVRTTDDCIQSQKELYAKHHHAADGR-IRIWFGIRQIM-NATDRLLLETR 229
LP + T D + + L A++H A+ R+ ++ + + R + ET
Sbjct: 176 QLEADLPTALRPETLDAYVADIERLAARYHDASPRAMRRVVMAPTTVLYSISPREMRETA 235
Query: 230 DMAREFKTGIHMHVAEIPYENQVVMDTRKVDHG--TVTFLDKIEFLQNNLLSAHTVWVNH 287
+AR +H H++E +G V F + ++L +++ AH V V+
Sbjct: 236 AVARRLGLRMHSHLSETVGYQDSAYSM----YGKSPVAFCGEHDWLGSDVWYAHLVKVDA 291
Query: 288 TEV 290
E+
Sbjct: 292 DEI 294
|
| >3v7p_A Amidohydrolase family protein; iron binding site, enzyme functio initiative, EFI; HET: TLA; 1.35A {Nitratiruptor SP} Length = 427 | Back alignment and structure |
|---|
Score = 224 bits (572), Expect = 1e-70
Identities = 48/281 (17%), Positives = 91/281 (32%), Gaps = 29/281 (10%)
Query: 22 ILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPG 81
I+ I+T + ++ V +I+AI ++++++ + ++ +LLPG
Sbjct: 3 IIKPFAILTPQ---TIIQDKAV-AFDKKIEAIDTVENLIKKYP--NAAVEHDENSLLLPG 56
Query: 82 FVNTHVHTSQQLAKGIADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTC 141
F N H+H K D + WL+ I E + D +I +G T
Sbjct: 57 FANPHLHLEFSANKATLQYGDFIPWLYSVIRHREDLLPLCD-GACLEQTLSSIIQTGTTA 115
Query: 142 FAEAGGQHVSEMAKAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYAKHH 201
E +A L+ + T D S E + +
Sbjct: 116 IGAIS--SYGEDLQACIDSALKVVYFNEVIGSNA--------ATADVMYASFLERFHQSK 165
Query: 202 HAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDT----- 256
+ R + I + L D+A+++ + + +H E E + +
Sbjct: 166 KHENERFKAAVAIHSPYSVHYILAKRALDIAKKYGSLVSVHFMESRAEREWLDKGSGEFA 225
Query: 257 -----RKVDHGTVTFLDKI--EFLQNNLLSAHTVWVNHTEV 290
V F + + L H VW N E+
Sbjct: 226 KFFKEFLNQTRPVNDTKSFLELFKELHTLFVHMVWANEEEI 266
|
| >2imr_A Hypothetical protein DR_0824; zinc, NYSGXRC, PSI2, structural genomics, protein structure initiative; 1.78A {Deinococcus radiodurans} SCOP: b.92.1.11 c.1.9.16 Length = 420 | Back alignment and structure |
|---|
Score = 191 bits (488), Expect = 3e-58
Identities = 44/312 (14%), Positives = 86/312 (27%), Gaps = 44/312 (14%)
Query: 3 TNSSGGGSSSGSLGSSSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQ 62
T S + + + + +L V+ T GGV VV + + A G ++ +Q
Sbjct: 21 TFSEATTPDALTPDAHTPRLLTCDVLYTGM--GGAQSPGGVVVVGETVAAAGHPDELRRQ 78
Query: 63 FSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIADDVDLMTWLHDRIWPYESNMTEED 122
+ + ++ P VN H H + A + W+ + +
Sbjct: 79 Y---PHAAEERAGAVIAPPPVNAHTHLDMSAYEFQA--LPYFQWIPEVVIRGRHLRGVA- 132
Query: 123 SYISTLLCGIELIHSGVTCFAEAGGQHVSEMAKAVELLGLRACLVQSTMDCGEGLPASWA 182
+ L G + M + L L ++
Sbjct: 133 ---AAQAGADTLTRLGAGGVGDIVW-APEVMDALLAREDLSGTLYFEVLN--------PF 180
Query: 183 VRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMH 242
D+ + + + +R+ + RL+ D A + +H
Sbjct: 181 PDKADEVFAAARTHLERWRRLERPGLRLGLSPHTPFTVSHRLMRLLSDYAAGEGLPLQIH 240
Query: 243 VAEIPYENQVVMDTRKVDHGT------------------------VTFLDKIEFLQNNLL 278
VAE P E ++ V +LD++ L
Sbjct: 241 VAEHPTELEMFRTGGGPLWDNRMPALYPHTLAEVIGREPGPDLTPVRYLDELGVLAARPT 300
Query: 279 SAHTVWVNHTEV 290
H V V ++
Sbjct: 301 LVHMVNVTPDDI 312
|
| >2ood_A BLR3880 protein; PSI-II, PSI-2, guanine deaminase, guanine, structural genomics, protein structure initiative; HET: GUN; 2.62A {Bradyrhizobium japonicum} SCOP: b.92.1.4 c.1.9.9 Length = 475 | Back alignment and structure |
|---|
Score = 176 bits (447), Expect = 9e-52
Identities = 53/270 (19%), Positives = 101/270 (37%), Gaps = 13/270 (4%)
Query: 28 IVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHV 87
I +R ++G + V IKA G I +I ++ +I++PGF++ H+
Sbjct: 23 IGNEQAAARFHQDGLMVVTDGVIKAFGPYEKIAAAHP--GVEITHIKDRIIVPGFIDGHI 80
Query: 88 HTSQQLAKGIADDVDLMTWLHDRIWPYESNMTEED-SYISTLLCGIELIHSGVTCFAEAG 146
H Q G + L+ WL I+P E + + + L+ +G T
Sbjct: 81 HLPQTRVLGAYGE-QLLPWLQKSIYPEEIKYKDRNYAREGVKRFLDALLAAGTTTCQAFT 139
Query: 147 ---GQHVSEMAKAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHA 203
E+ + +R + +D PA + T ++ + K L A++H
Sbjct: 140 SSSPVATEELFEEASRRNMRVIAGLTGIDR--NAPAEFI-DTPENFYRDSKRLIAQYHD- 195
Query: 204 ADGRIRIWFGIRQIMNATDRLLLETRDMAREFK-TGIHMHVAEIPYENQVVMDTRKVDHG 262
GR R A+ LL + + E ++ H++E P E V+
Sbjct: 196 -KGRNLYAITPRFAFGASPELLKACQRLKHEHPDCWVNTHISENPAECSGVLVEHPDCQD 254
Query: 263 TVTFLDKIEFLQNNLLSAHTVWVNHTEVNC 292
+ +K + + H V++++ E
Sbjct: 255 YLGVYEKFDLVGPKFSGGHGVYLSNNEFRR 284
|
| >2i9u_A Cytosine/guanine deaminase related protein; protein structure initiative II (PSI-II), amidohydrol guanine deaminase; HET: GUN; 2.05A {Clostridium acetobutylicum} SCOP: b.92.1.4 c.1.9.9 Length = 439 | Back alignment and structure |
|---|
Score = 173 bits (441), Expect = 3e-51
Identities = 53/274 (19%), Positives = 108/274 (39%), Gaps = 14/274 (5%)
Query: 22 ILHNAVIVTMDKES-RVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLP 80
I +I T + + ++ + V+ +I ++ + + + IID ++ I++P
Sbjct: 12 IFKGNLIFTKTSDKFTIMKDSYIVVIDGKIASVSSNLPDKYK----GNPIIDFRNNIIIP 67
Query: 81 GFVNTHVHTSQQLAKGIADDVDLMTWLHDRIWPYESNMTEED-SYISTLLCGIELIHSGV 139
G + H H SQ GI D +L+ WL++ +P E+ D + + +LI +G
Sbjct: 68 GMNDLHAHASQYKNLGIGMDKELLPWLNNYTFPEEAKFLNVDYAKKTYGRLIKDLIKNGT 127
Query: 140 TCFAEAGGQH---VSEMAKAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKEL 196
T A H E+ + G+ A + + MD P + +E+
Sbjct: 128 TRVALFATLHKDSTIELFNMLIKSGIGAYVGKVNMDYNC--PDYLT-ENYITSLNDTEEI 184
Query: 197 YAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDT 256
K+ ++ R + + ++ L+ ++ +++ + H++E E VV
Sbjct: 185 ILKYKD-KSNIVKPIITPRFVPSCSNELMDGLGKLSYKYRLPVQSHLSENLDEIAVVKSL 243
Query: 257 RKVDHGTVTFLDKIEFLQNN-LLSAHTVWVNHTE 289
K + DK N L AH + + E
Sbjct: 244 HKKSNFYGEVYDKFGLFGNTPTLMAHCIHSSKEE 277
|
| >4aql_A Guanine deaminase; hydrolase, purine metabolism; HET: TXC; 1.99A {Homo sapiens} PDB: 2uz9_A* 3e0l_A Length = 476 | Back alignment and structure |
|---|
Score = 170 bits (433), Expect = 1e-49
Identities = 54/284 (19%), Positives = 110/284 (38%), Gaps = 12/284 (4%)
Query: 17 SSSTMILHNAVIVTMDKES-RVFRNGGVFVVQDR-IKAIGQSAD---ILQQFSQMADQII 71
I + + V R+ + V I + +++ + +++ +I
Sbjct: 29 PPLAHIFRGTFVHSTWTCPMEVLRDHLLGVSDSGKIVFLEEASQQEKLAKEWCFKPCEIR 88
Query: 72 DL-QSQILLPGFVNTHVHTSQQLAKGIADDVDLMTWLHDRIWPYESNMTEED-SYISTLL 129
+L + +PG V+TH+H SQ G + D+ L+ WL +P E D +
Sbjct: 89 ELSHHEFFMPGLVDTHIHASQYSFAGSSIDLPLLEWLTKYTFPAEHRFQNIDFAEEVYTR 148
Query: 130 CGIELIHSGVTC---FAEAGGQHVSEMAKAVELLGLRACLVQSTMDCGEGLPASWAVRTT 186
+ +G T FA +A + G RA + + MD + P TT
Sbjct: 149 VVRRTLKNGTTTACYFATIHTDSSLLLADITDKFGQRAFVGKVCMDLNDTFPE--YKETT 206
Query: 187 DDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEI 246
++ I+ + ++ R++ R ++ ++ L+ E ++A+ I H++E
Sbjct: 207 EESIKETERFVSEMLQKNYSRVKPIVTPRFSLSCSETLMGELGNIAKTRDLHIQSHISEN 266
Query: 247 PYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEV 290
E + V + + DK L N + AH +++ E+
Sbjct: 267 RDEVEAVKNLYPSYKNYTSVYDKNNLLTNKTVMAHGCYLSAEEL 310
|
| >3mdu_A N-formimino-L-glutamate iminohydrolase; amonohydralase family, N-formimino-L-glutamate iminohydrolas guanidino-L-glutamate; HET: NGQ; 1.40A {Pseudomonas aeruginosa} PDB: 3mdw_A* Length = 453 | Back alignment and structure |
|---|
Score = 157 bits (399), Expect = 6e-45
Identities = 47/285 (16%), Positives = 91/285 (31%), Gaps = 33/285 (11%)
Query: 30 TMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHT 89
+ E + G V+ I A G A+I + +LPG N H H
Sbjct: 3 AIFAERALLPEGWARNVRFEISADGVLAEIRPDA---NADGAERLGGAVLPGMPNLHSHA 59
Query: 90 SQQLAKGIAD-----DVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAE 144
Q+ G+A+ + TW + ++ + ++ E + IE++ +G T AE
Sbjct: 60 FQRAMAGLAEVAGNPNDSFWTWR-ELMYRMVARLSPEQIEVIACQLYIEMLKAGYTAVAE 118
Query: 145 --------------AGGQHVSEMAKAVELLGLRACLVQSTMDCGE--GLPASWAVRTTDD 188
+ +++A G+ L+ G PAS R +
Sbjct: 119 FHYVHHDLDGRSYADPAELSLRISRAASAAGIGLTLLPVLYSHAGFGGQPASEGQRRFIN 178
Query: 189 CIQSQKELYAKHHHAADG-RIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIP 247
++ EL + + + + T + + + +H+H+AE
Sbjct: 179 GSEAYLELLQRLRAPLEAAGHSLGLCFHSLRAVTPQQIATVLAAGHD-DLPVHIHIAEQQ 237
Query: 248 YENQVVMDTRKVDHGT--VTFLDKIEFLQNNLLSAHTVWVNHTEV 290
E G + +L + + H + EV
Sbjct: 238 KEVDDCQAW----SGRRPLQWLYENVAVDQRWCLVHATHADPAEV 278
|
| >4f0l_A Amidohydrolase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 2.05A {Brucella melitensis biovar abortus} Length = 458 | Back alignment and structure |
|---|
Score = 155 bits (394), Expect = 3e-44
Identities = 44/305 (14%), Positives = 86/305 (28%), Gaps = 47/305 (15%)
Query: 13 GSLGSSSTM-ILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQII 71
GS+ S+ +H + D N + + I +I
Sbjct: 3 GSMSDQSSQHFIHARQALLPD---GWAENVRIGIAGGVICSIETGV---------LAGPD 50
Query: 72 DLQSQILLPGFVNTHVHTSQQLAKGIADDV-----DLMTWLHDRIWPYESNMTEEDSYIS 126
D + +++ G N H H Q G+A+ +W ++ + MT E +
Sbjct: 51 DERQSVVVAGMANLHSHAFQYGMAGLAERRGPSADSFWSWRE-IMYKFALTMTPEQAEAV 109
Query: 127 TLLCGIELIHSGVTCFAE--------------AGGQHVSEMAKAVELLGLRACLVQSTMD 172
L ++++ +G T E + +A A G+ L+
Sbjct: 110 ALRLYVDMLEAGFTRVGEFHYLHHDCDGTPYANLSEMADRIAAAATTAGMGLTLLPVFYA 169
Query: 173 CGEGLPASWAVRTTDDCIQSQKELYAKHH-----HAADGRIRIWFGIRQIMNATDRLLLE 227
G + A I + + + T L
Sbjct: 170 HS-GFGGAAANEGQRRFINDPERFARLIEGCRKTLEGFEGAVLGVAPHSLRAVTPDELDS 228
Query: 228 TRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGT--VTFLDKIEFLQNNLLSAHTVWV 285
+ + +H+HVAE E + + G V +L + + H +
Sbjct: 229 VTQLLPD--APVHIHVAEQVKEVEDCIAW----SGKRPVEWLLDHQDVTARWCLIHATHM 282
Query: 286 NHTEV 290
+ E
Sbjct: 283 SDEET 287
|
| >2bb0_A Imidazolonepropionase; TIM barrel, hydrolase; 2.00A {Bacillus subtilis} SCOP: b.92.1.10 c.1.9.17 PDB: 2g3f_A Length = 421 | Back alignment and structure |
|---|
Score = 125 bits (316), Expect = 2e-33
Identities = 41/276 (14%), Positives = 82/276 (29%), Gaps = 34/276 (12%)
Query: 19 STMILHNAVIVTMDKES----------RVFRNGGVFVVQDRIKAIGQSADILQQFSQMAD 68
T++++ ++TM+ V + V + + +I GQ AD
Sbjct: 6 DTILINIGQLLTMESSGPRAGKSMQDLHVIEDAVVGIHEQKIVFAGQKGAEAGYE---AD 62
Query: 69 QIIDLQSQILLPGFVNTHVHTSQQLAKGIADDVDLMTWLHDRIWPYE----------SNM 118
+IID +++ PG V+ H H ++ ++ L + I
Sbjct: 63 EIIDCSGRLVTPGLVDPHTHLVFGGSREKEMNLKLQGISYLDILAQGGGILSTVKDTRAA 122
Query: 119 TEEDSYISTLLCGIELIHSGVTCFAEAGGQHVSEMAKAVELLGLRACLVQSTMDCGEGLP 178
+EE+ ++ G T G + + + +L + +D
Sbjct: 123 SEEELLQKAHFHLQRMLSYGTTTAEVKSGYGLEKETELKQLRVAKKLHESQPVDLVSTFM 182
Query: 179 ASWAV-----RTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAR 233
+ A+ DD + L + F + + + A
Sbjct: 183 GAHAIPPEYQNDPDDFLDQMLSLLPEIKEQELASFADIFTETGVFTVSQSRRYLQK--AA 240
Query: 234 EFKTGIHMHVAEIPYENQVVM----DTRKVDHGTVT 265
E G+ +H EI + DH T
Sbjct: 241 EAGFGLKIHADEIDPLGGAELAGKLKAVSADHLVGT 276
|
| >2puz_A Imidazolonepropionase; NYSGXRC, PSI-2, N-formimino-L- glutamate, product-bound, structural genomics, protein STRU initiative; HET: NIG; 1.83A {Agrobacterium tumefaciens str} SCOP: b.92.1.10 c.1.9.17 PDB: 2gok_A Length = 419 | Back alignment and structure |
|---|
Score = 125 bits (314), Expect = 4e-33
Identities = 45/294 (15%), Positives = 93/294 (31%), Gaps = 26/294 (8%)
Query: 6 SGGGSSSGSLGSSSTMILHNAVIVTMDKESR---VFRNGGVFVVQDRIKAIGQSADILQQ 62
G S+ G+ ++T + NA + T++ N + V RI G +D+
Sbjct: 2 PGNNSAKGTATGNATALWRNAQLATLNPAMDGIGAVENAVIAVRNGRIAFAGPESDLPDD 61
Query: 63 FSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIADDVDLMTWLHDRIWPYE------- 115
S AD+ D + + P ++ H H + + ++ L ++ I
Sbjct: 62 LST-ADETTDCGGRWITPALIDCHTHLVFGGNRAMEFEMRLNGATYEEIAKAGGGIVSSV 120
Query: 116 ---SNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQHVS-----EMAKAVELLG-LRACL 166
+++E L L+ GV+ G + +M + L LR
Sbjct: 121 RDTRALSDEVLVAQALPRLDTLLSEGVSTIEIKSGYGLDIETELKMLRVARRLETLRPVR 180
Query: 167 VQSTMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLL 226
+ ++ PA + R D A+G G + + + + +
Sbjct: 181 IVTSYLAAHATPADYKGRNADYITDVVLPGL--EKAHAEGLADAVDGFCEGIAFSVKEID 238
Query: 227 ETRDMAREFKTGIHMHVAEI----PYENQVVMDTRKVDHGTVTFLDKIEFLQNN 276
A++ + +H ++ E + DH + L
Sbjct: 239 RVFAAAQQRGLPVKLHAEQLSNLGGAELAASYNALSADHLEYLDETGAKALAKA 292
|
| >1ra0_A Cytosine deaminase; alpha-beta barrel, hexamer, conformation change, D314G mutant, hydrolase; 1.12A {Escherichia coli} SCOP: b.92.1.2 c.1.9.5 PDB: 1r9x_A 1ra5_A 1r9y_A 1r9z_A 1rak_A 3r0d_A* 3o7u_A* 3rn6_A* 1k6w_A 1k70_A 3g77_A Length = 430 | Back alignment and structure |
|---|
Score = 89.3 bits (221), Expect = 3e-20
Identities = 40/279 (14%), Positives = 92/279 (32%), Gaps = 32/279 (11%)
Query: 13 GSLGSSSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIID 72
S+ +++ + NA + + ++ G +I AI + ++ + +D
Sbjct: 2 SSMANNALQTIINARLPGEEGLWQIHLQDG------KISAIDAQSGVMPI----TENSLD 51
Query: 73 LQSQILLPGFVNTHVHTSQQLAKGIAD---DVDLMTWLHDRIWPYESNMTEEDSYISTLL 129
+ +++P FV H+H G + L + +R ++ +T +D
Sbjct: 52 AEQGLVIPPFVEPHIHLDTTQTAGQPNWNQSGTLFEGI-ERWAERKALLTHDDVKQRAWQ 110
Query: 130 CGIELIHSGVTCFAEAGGQHV---SEMAKAVELLGLRACLVQSTMDCGEGLPASWAVRTT 186
I +G+ HV A++ + V +D + +
Sbjct: 111 TLKWQIANGIQHVRT----HVDVSDATLTALKAMLEVKQEVAPWIDLQIVAFPQEGILSY 166
Query: 187 DDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEI 246
+ + L + + L +T +A+++ I +H EI
Sbjct: 167 PNG----EALLEEALRLGADVVGAIPHFEFTREYGVESLHKTFALAQKYDRLIDVHCDEI 222
Query: 247 PYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWV 285
E ++ TV L E + + ++HT +
Sbjct: 223 DDEQSRFVE-------TVAALAHHEGMGARVTASHTTAM 254
|
| >2q09_A Imidazolonepropionase; 9252H, NYSGXRC, 3-(2, 5-dioxo-imidazo 4YL)-propionic acid, PSI-2 community, structural genomics, structure initiative; HET: DI6; 1.97A {Unidentified} SCOP: b.92.1.10 c.1.9.17 PDB: 2oof_A* Length = 416 | Back alignment and structure |
|---|
Score = 82.2 bits (203), Expect = 7e-18
Identities = 38/283 (13%), Positives = 84/283 (29%), Gaps = 30/283 (10%)
Query: 18 SSTMILHNAVIVTMDKESR---VFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQ 74
+ + N T+ + + + V + RI A+ D+ + D++
Sbjct: 4 NCERVWLNVTPATLRSDLADYGLLEPHALGVHEGRIHALVPMQDLKGPY---PAHWQDMK 60
Query: 75 SQILLPGFVNTHVHTSQ---------QLAKGI--ADDVDLMTWLHDRIWPYESNMTEEDS 123
+++ PG ++ H H KG+ A+ + +E+
Sbjct: 61 GKLVTPGLIDCHTHLIFAGSRAEEFELRQKGVPYAEIARKGGGII-STVRATRAASEDQL 119
Query: 124 YISTLLCGIELIHSGVTCFAEAGGQHVS-----EMAKAVELLGLRACLVQSTMDCGEG-L 177
+ L LI GVT G ++ +M + LG + T +
Sbjct: 120 FELALPRVKSLIREGVTTVEIKSGYGLTLEDELKMLRVARRLGEALPIRVKTTLLAAHAV 179
Query: 178 PASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKT 237
P + +E+ A F + + + + A ++
Sbjct: 180 PPEYRDDPDSWVETICQEIIPAAAEAGLADAVDVFC--EHIGFSLAQTEQVYLAADQYGL 237
Query: 238 GIHMHVAEIPYENQVVM----DTRKVDHGTVTFLDKIEFLQNN 276
+ H+ ++ + VDH + I+ L +
Sbjct: 238 AVKGHMDQLSNLGGSTLAANFGALSVDHLEYLDPEGIQALAHR 280
|
| >2qt3_A N-isopropylammelide isopropyl amidohydrolase; N-isopropylammelide isopropylaminohydrolase ATZC, structural genomics, NYSGXRC, target 9364B; 2.24A {Pseudomonas SP} Length = 403 | Back alignment and structure |
|---|
Score = 79.6 bits (196), Expect = 6e-17
Identities = 37/232 (15%), Positives = 64/232 (27%), Gaps = 25/232 (10%)
Query: 21 MILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLP 80
+I+ NA + D + +V DRI I + ID + ++ P
Sbjct: 7 LIIRNAYLSEKDSVYDIG------IVGDRIIKIEAKIE------GTVKDEIDAKGNLVSP 54
Query: 81 GFVNTHVHTSQQLAKGIADDVDLMTWLHDRIW------PYESNMTEEDSYISTLLCGIEL 134
GFV+ H H + + + R Y N T E+ +
Sbjct: 55 GFVDAHTHMDKSFTSTGERLPKFWSRPYTRDAAIEDGLKYYKNATHEEIKRHVIEHAHMQ 114
Query: 135 IHSGVTCFAEAGGQHVSEMAKAVE-LLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQ 193
+ G KAVE +L + L S +
Sbjct: 115 VLHGTLYTRTHVDVDSVAKTKAVEAVLEAKEELKDLIDIQVVAFAQSGFFVDLES----- 169
Query: 194 KELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAE 245
E + + N + L +A+E+ I H+ +
Sbjct: 170 -ESLIRKSLDMGCDLVGGVDPATRENNVEGSLDLCFKLAKEYDVDIDYHIHD 220
|
| >2ogj_A Dihydroorotase; TIM barrel, binuclear zinc, imidazole complex, amido hydrola 9244B, structural genomics, PSI-2; HET: KCX; 2.62A {Agrobacterium tumefaciens} Length = 417 | Back alignment and structure |
|---|
Score = 70.5 bits (172), Expect = 6e-14
Identities = 42/243 (17%), Positives = 81/243 (33%), Gaps = 40/243 (16%)
Query: 18 SSTMILHNAVIVTMDKESRVFRNGGVFVVQD-RIKAIGQSADILQQFSQMADQIIDLQSQ 76
+ ++L N V + + + + D +I A+G + Q ID +
Sbjct: 14 QAPILLTNVKPVGFG-KGASQSSTDILIGGDGKIAAVGSALQAPA-----DTQRIDAKGA 67
Query: 77 ILLPGFVNTHVHTSQQLAKGIADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIH 136
+ PG+V+ HVH IW ++++ S L+
Sbjct: 68 FISPGWVDLHVH----------------------IWHGGTDISIRPSECGAERGVTTLVD 105
Query: 137 SGVTCFAEAGGQHVSEMAKAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDC----IQS 192
+G A G + + E ++A L GL A V D +
Sbjct: 106 AGSAGEANFHGFREYIIEPSRE--RIKAFLNL----GSIGLVACNRVPELRDIKDIDLDR 159
Query: 193 QKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQV 252
E YA++ G +++ + + + +A+ K + +HV E P
Sbjct: 160 ILECYAENSEHIVG-LKVRASHVITGSWGVTPVKLGKKIAKILKVPMMVHVGEPPALYDE 218
Query: 253 VMD 255
V++
Sbjct: 219 VLE 221
|
| >2vun_A Enamidase; nicotinate degradation, binuclear metal center, amidohydrolases, stereospecificity, hydrolase; 1.89A {Eubacterium barkeri} Length = 386 | Back alignment and structure |
|---|
Score = 66.1 bits (161), Expect = 2e-12
Identities = 41/257 (15%), Positives = 69/257 (26%), Gaps = 39/257 (15%)
Query: 18 SSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQI 77
S T+I + IV+ D +S V + + V I AIG + IID
Sbjct: 2 SKTIIKNIGKIVSGDIKSPVLQADTIVVEDGLIAAIGGEELMKDAG---DATIIDAAGST 58
Query: 78 LLPGFVNTHVHTSQQLAKGIADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHS 137
+ PG ++THVH + +H
Sbjct: 59 VTPGLLDTHVH-------------------------VSGGDYAPRQKTMDFI--SSALHG 91
Query: 138 GVTCFAEAGGQHVSEMAKAVELLGLRA---CLVQSTMDCGEGLPASWAVRTTDDCIQSQK 194
GVT AG H + + G +A L +S + + +++
Sbjct: 92 GVTTMISAGSPH--FPGRPKDAAGTKALAITLSKSYYNARPAGVKVHGGAVILEKGLTEE 149
Query: 195 ELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVM 254
+ + G I N + A + + MH +
Sbjct: 150 DFIEMKKEGVWIVGEVGLGT--IKN--PEDAAPMVEWAHKHGFKVQMHTGGTSIPGSSTV 205
Query: 255 DTRKVDHGTVTFLDKIE 271
V + I
Sbjct: 206 TADDVIKTKPDVVSHIN 222
|
| >3icj_A Uncharacterized metal-dependent hydrolase; structural genomics, amidohydrolase, PSI-2, protein structur initiative; HET: KCX; 1.95A {Pyrococcus furiosus} PDB: 3etk_A* 3igh_X* Length = 534 | Back alignment and structure |
|---|
Score = 63.0 bits (154), Expect = 3e-11
Identities = 17/67 (25%), Positives = 32/67 (47%), Gaps = 2/67 (2%)
Query: 22 ILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPG 81
L N I T + G+ + +R+ G S+ L+ +IIDL+ + ++P
Sbjct: 39 ALINGTIYTSFSPVKKVS--GLVISNERVLYAGDSSTALRIAELAGGEIIDLKGKFVMPA 96
Query: 82 FVNTHVH 88
F ++H+H
Sbjct: 97 FFDSHLH 103
|
| >2vhl_A N-acetylglucosamine-6-phosphate deacetylase; N- acetyleglucosamine-6-phosphate, carbohydrate metabolism, hydrolase; HET: GLP PGE; 2.05A {Bacillus subtilis} Length = 396 | Back alignment and structure |
|---|
Score = 58.8 bits (143), Expect = 5e-10
Identities = 16/71 (22%), Positives = 33/71 (46%), Gaps = 7/71 (9%)
Query: 18 SSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQI 77
+ ++++ + IVT E+ V +NG V + +I + + +I +
Sbjct: 2 AESLLIKDIAIVT---ENEVIKNGYVGINDGKISTVSTERPKEPY----SKEIQAPADSV 54
Query: 78 LLPGFVNTHVH 88
LLPG ++ H+H
Sbjct: 55 LLPGMIDIHIH 65
|
| >2p9b_A Possible prolidase; protein structure initiative II, PSI-2, amidohydrolase, structural genomics; 1.70A {Bifidobacterium longum NCC2705} SCOP: b.92.1.10 c.1.9.17 Length = 458 | Back alignment and structure |
|---|
Score = 56.7 bits (137), Expect = 2e-09
Identities = 30/131 (22%), Positives = 47/131 (35%), Gaps = 5/131 (3%)
Query: 18 SSTMILHNAVIVTMDKESRVFRNGGVFVVQD-RIKAIGQSADILQQFSQMADQIIDLQSQ 76
L +A IVT DK + RN + V D RI+ + S + +D +
Sbjct: 11 VEPFALAHATIVTGDKAGTILRNMTIVVGADGRIEQVAPSIETSIPA---EYHYLDGTGK 67
Query: 77 ILLPGFVNTHVHTSQQLAKGIADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIH 136
I++PG +N H H Q K + + S + + + L+
Sbjct: 68 IVMPGLINAHTHLFSQ-GKPLNPKLATPKGQRMVATFAHSPLGKPYMAATVKHNATTLLE 126
Query: 137 SGVTCFAEAGG 147
SGVT G
Sbjct: 127 SGVTTIRTLGD 137
|
| >3be7_A Zn-dependent arginine carboxypeptidase; unknown source, amidohydrolase, sargasso SEA, structural GEN protein structure initiative, PSI; HET: ARG; 2.30A {Unidentified} SCOP: b.92.1.9 c.1.9.18 PDB: 3dug_A* Length = 408 | Back alignment and structure |
|---|
Score = 56.2 bits (136), Expect = 4e-09
Identities = 13/72 (18%), Positives = 30/72 (41%), Gaps = 9/72 (12%)
Query: 17 SSSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQ 76
+S ++ + + D ++ + + +I IG+ +I +
Sbjct: 4 TSEDFLIKSKGYL--DIQTGEIIKADLLIRNGKIAEIGKINTK-------DATVISIPDL 54
Query: 77 ILLPGFVNTHVH 88
IL+PG +++HVH
Sbjct: 55 ILIPGLMDSHVH 66
|
| >3ggm_A Uncharacterized protein BT9727_2919; bacillus cereus group., structural genomics, PSI-2, protein structure initiative; 2.00A {Bacillus thuringiensis serovarkonkukian} Length = 81 | Back alignment and structure |
|---|
Score = 51.4 bits (124), Expect = 5e-09
Identities = 18/69 (26%), Positives = 30/69 (43%), Gaps = 6/69 (8%)
Query: 21 MILHNAVIVTMDKESRVFRNGGVFVVQD-RIKAIGQSADILQQFSQMADQIIDLQSQILL 79
MIL+N I T+D + D I A+G + + IDL+ + +
Sbjct: 6 MILYNGKITTLDPS---QPEVSAIAITDGLITAVGGDELLNSATE--KTKKIDLKRKRAI 60
Query: 80 PGFVNTHVH 88
PG ++H+H
Sbjct: 61 PGLNDSHIH 69
|
| >3iv8_A N-acetylglucosamine-6-phosphate deacetylase; IDP01334, fruct phosphate, carbohydrate metabolism, hydrolase; HET: F6P; 2.53A {Vibrio cholerae} PDB: 3egj_A* Length = 381 | Back alignment and structure |
|---|
Score = 54.5 bits (132), Expect = 1e-08
Identities = 17/72 (23%), Positives = 30/72 (41%), Gaps = 9/72 (12%)
Query: 18 SSTM-ILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQ 76
S+ M L N I T + V V + D+I+A+ + ++DL
Sbjct: 1 SNAMYALTNCKIYT---GNDVLVKHAVIINGDKIEAVCPIESLPS-----EMNVVDLNGA 52
Query: 77 ILLPGFVNTHVH 88
L PGF++ ++
Sbjct: 53 NLSPGFIDLQLN 64
|
| >2qs8_A XAA-Pro dipeptidase; amidohydrolase, TIM barrel, protein structure initiative, PSI-2, NYSGXRC, structural genomics; 2.33A {Alteromonas macleodii} SCOP: b.92.1.9 c.1.9.18 Length = 418 | Back alignment and structure |
|---|
Score = 52.8 bits (127), Expect = 5e-08
Identities = 18/76 (23%), Positives = 32/76 (42%), Gaps = 7/76 (9%)
Query: 14 SLGSSSTMILHNAVIVTMDKESRVFRNGGVFVVQD-RIKAIGQSADILQQFSQMADQIID 72
SL S ++H ++ D +S ++ V+ I I + + ID
Sbjct: 2 SLDVDSKTLIHAGKLI--DGKSDQVQSRISIVIDGNIISDIKKGFISSND----FEDYID 55
Query: 73 LQSQILLPGFVNTHVH 88
L+ +LPG ++ HVH
Sbjct: 56 LRDHTVLPGLMDMHVH 71
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 53.3 bits (127), Expect = 5e-08
Identities = 46/310 (14%), Positives = 88/310 (28%), Gaps = 92/310 (29%)
Query: 55 QSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIADDVDLMTWLHDRIWPY 114
Q+A F +L +ILL T++ K + D + T H + +
Sbjct: 254 QNAKAWNAF--------NLSCKILL---------TTRF--KQVTDFLSAATTTHISLDHH 294
Query: 115 ESNMTEEDSY--------------------ISTLLCGI--ELIHSGVTC---FAEAGGQH 149
+T ++ + I E I G+ +
Sbjct: 295 SMTLTPDEVKSLLLKYLDCRPQDLPREVLTTNPRRLSIIAESIRDGLATWDNWKHVNCDK 354
Query: 150 VSE-MAKAVELLG---LRACLVQ-STMDCGEGLPAS-----WAVRTTDDCIQSQKELYAK 199
++ + ++ +L R + S +P W D + +L+
Sbjct: 355 LTTIIESSLNVLEPAEYRKMFDRLSVFPPSAHIPTILLSLIWFDVIKSDVMVVVNKLHKY 414
Query: 200 ---HHHAADGRIRIWFGI-----RQIMNATD--RLLLETRDMAREFKT------------ 237
+ I I I ++ N R +++ ++ + F +
Sbjct: 415 SLVEKQPKESTISI-PSIYLELKVKLENEYALHRSIVDHYNIPKTFDSDDLIPPYLDQYF 473
Query: 238 ----GIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEVNCT 293
G H+ E E + R V FLD FL+ + T W + T
Sbjct: 474 YSHIGHHLKNIE-HPERMTLF--RMV------FLD-FRFLEQKIRHDSTAWNASGSILNT 523
Query: 294 FGNFK-YAVH 302
K Y +
Sbjct: 524 LQQLKFYKPY 533
|
| >3nqb_A Adenine deaminase 2; PSI-II, structural genomics, protein structure initiative, N SGX research center for structural genomics, nysgxrc; 2.21A {Agrobacterium tumefaciens} PDB: 3t81_A 3t8l_A Length = 608 | Back alignment and structure |
|---|
Score = 52.3 bits (125), Expect = 9e-08
Identities = 40/274 (14%), Positives = 76/274 (27%), Gaps = 49/274 (17%)
Query: 21 MILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLP 80
+++ +V D + R + +V I ++ + A A Q+ID + P
Sbjct: 37 VLITGGTLV--DVVTGELRPADIGIVGALIASVHEPASRRD-----AAQVIDAGGAYVSP 89
Query: 81 GFVNTHVHTSQQLAKGIADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVT 140
G ++TH+H ES+M +Y + ++ T
Sbjct: 90 GLIDTHMH-------------------------IESSMITPAAYAAAVVA-----RGVTT 119
Query: 141 CFAEAGGQHVSEMAKAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYAKH 200
+ V + + P V + + + A
Sbjct: 120 IVWDPHEFGNVHGVDGVRW--AAKAIENLPLRAILLAP--SCVPSAPGLERGGADFDAAI 175
Query: 201 HHAADGRIRIWFGIRQIMNAT-----DRLLLETRDMAREFKTGIHMHVAEIPYENQVVMD 255
I GI +IMN D + + + H + +
Sbjct: 176 LADLLSWPEIG-GIAEIMNMRGVIERDPRMSGIVQAGLAAEKLVCGHARGLKNADLNAFM 234
Query: 256 TRKV--DHGTVTFLDKIEFLQNNLLSAHTVWVNH 287
V DH V+ D + L+ L +H
Sbjct: 235 AAGVSSDHELVSGEDLMAKLRAGLTIELRGSHDH 268
|
| >3feq_A Putative amidohydrolase; unknown source, sargasso SEA, structural genomics, protein structure initiative, PSI; 2.63A {Unidentified} PDB: 3lwy_A* 3n2c_A* Length = 423 | Back alignment and structure |
|---|
Score = 52.0 bits (125), Expect = 1e-07
Identities = 15/72 (20%), Positives = 34/72 (47%), Gaps = 6/72 (8%)
Query: 17 SSSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQ 76
S + +L ++ +++ + + V + +RI + L Q ID++ +
Sbjct: 2 SLTITVLQGGNVLDLERG-VLLEHHHVVIDGERIVEVTDRPVDLP-----NAQAIDVRGK 55
Query: 77 ILLPGFVNTHVH 88
++PGF++ HVH
Sbjct: 56 TVMPGFIDCHVH 67
|
| >1yrr_A N-acetylglucosamine-6-phosphate deacetylase; (beta/alpha)8 barrel, beta sandwich, hydrolase; 2.00A {Escherichia coli} SCOP: b.92.1.5 c.1.9.10 PDB: 1ymy_A 2p50_A 2p53_A* Length = 382 | Back alignment and structure |
|---|
Score = 51.4 bits (124), Expect = 1e-07
Identities = 13/66 (19%), Positives = 24/66 (36%), Gaps = 8/66 (12%)
Query: 23 LHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGF 82
L I T + V + IK++ A++ + L IL PGF
Sbjct: 4 LTQGRIFT---GHEFLDDHAVVIADGLIKSVCPVAEL-----PPEIEQRSLNGAILSPGF 55
Query: 83 VNTHVH 88
++ ++
Sbjct: 56 IDVQLN 61
|
| >2gwn_A Dihydroorotase; zinc-binding prote structural genomics, PSI, protein structure initiative, MID center for structural genomics, MCSG; HET: KCX GOL; 1.85A {Porphyromonas gingivalis} Length = 452 | Back alignment and structure |
|---|
Score = 51.4 bits (124), Expect = 1e-07
Identities = 18/69 (26%), Positives = 32/69 (46%), Gaps = 5/69 (7%)
Query: 20 TMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILL 79
++L NA+I E + F G V + I I + ++ + AD++I+ L
Sbjct: 5 KILLRNALITN---EGKTFP-GSVMIDGAFISRIIEG-ELPADDNLSADEVIECSGLRLF 59
Query: 80 PGFVNTHVH 88
PG ++ VH
Sbjct: 60 PGCIDDQVH 68
|
| >3ooq_A Amidohydrolase; structural genomics, protein structure INI NEW YORK structural genomix research consortium, NYSGXRC, H PSI-2; 2.06A {Thermotoga maritima} Length = 396 | Back alignment and structure |
|---|
Score = 50.4 bits (120), Expect = 3e-07
Identities = 30/260 (11%), Positives = 68/260 (26%), Gaps = 30/260 (11%)
Query: 15 LGSSSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQ 74
+ S ++ NA + + G V V +++ +G++ + +I+DL
Sbjct: 1 MSLSVKILFKNATVFPITSRPF---KGDVLVSNGKVEKVGENIEDP------DAEIVDLT 51
Query: 75 SQILLPGFVNTHVH--TSQQLAKGIADDVDLMT-------WLHDRIWPYESNMTEEDSYI 125
+ L PGFV+ H H ++ D + T D P + + +
Sbjct: 52 GKFLFPGFVDAHSHIGLFEEGVGYYYSDGNEATDPVTPHVKALDGFNPQDPAIERALAGG 111
Query: 126 ST---LLCGIELIHSGVTCFAEAGGQHVSEMAKAVELLGLRACLVQSTMDCGEGLPASWA 182
T ++ G G + V E ++
Sbjct: 112 VTSVMIVPGSANPVGGQGSVIKFRSIIVEECI-------VKDPAGLKMAFGENPKRVYGE 164
Query: 183 VRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTG--IH 240
+ T + + ++ ++ L+ +
Sbjct: 165 RKQTPSTRMGTAGVIRDYFTKVKNYMKKKELAQKEGKEFTETDLKMEVGEMVLRKKIPAR 224
Query: 241 MHVAEIPYENQVVMDTRKVD 260
MH + +
Sbjct: 225 MHAHRADDILTAIRIAEEFG 244
|
| >2r8c_A Putative amidohydrolase; unknown source, sargasso SEA, structural genomics, protein structure initiative, PSI; 2.31A {Unidentified} SCOP: b.92.1.9 c.1.9.18 PDB: 3mkv_A* Length = 426 | Back alignment and structure |
|---|
Score = 50.4 bits (121), Expect = 3e-07
Identities = 19/131 (14%), Positives = 45/131 (34%), Gaps = 22/131 (16%)
Query: 17 SSSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQ 76
S +T + N ++ D + + + + I+ + +ID++ +
Sbjct: 2 SLTTFLFRNGALLDPDHP-DLLQGFEILIEDGFIREVSDKPIKSS-----NAHVIDVKGK 55
Query: 77 ILLPGFVNTHVHTSQQLAKGIADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIH 136
++PG ++ HVH A + +L + + + ++
Sbjct: 56 TIMPGLIDLHVHVV-------AIEFNLPRVA---------TLPNVLVTLRAVPIMRAMLR 99
Query: 137 SGVTCFAEAGG 147
G T +AGG
Sbjct: 100 RGFTTVRDAGG 110
|
| >3hm7_A Allantoinase; metallo-dependent hydrolase, protein structure initiative, PSI-2, NEW YORK structural genomix research CON nysgxrc; 2.60A {Bacillus halodurans} Length = 448 | Back alignment and structure |
|---|
Score = 49.5 bits (119), Expect = 6e-07
Identities = 18/68 (26%), Positives = 29/68 (42%), Gaps = 8/68 (11%)
Query: 21 MILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLP 80
+I+ ++ +VT E+ +R V + + AI + I ID L P
Sbjct: 8 LIIRSSTVVT---ETTTYR-ADVAIRNGIVSAITEPGSISSD----DGPAIDGTGLHLFP 59
Query: 81 GFVNTHVH 88
G V+ HVH
Sbjct: 60 GMVDVHVH 67
|
| >1o12_A N-acetylglucosamine-6-phosphate deacetylase; structural genomics, TM0814, JCSG, PSI, protein structure initiative; 2.50A {Thermotoga maritima} SCOP: b.92.1.5 c.1.9.10 Length = 376 | Back alignment and structure |
|---|
Score = 48.8 bits (117), Expect = 8e-07
Identities = 15/79 (18%), Positives = 28/79 (35%), Gaps = 17/79 (21%)
Query: 10 SSSGSLGSSSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQ 69
S MI+ +IV G V + + +I + ++
Sbjct: 2 GSDKIHHHHHHMIVEKVLIVD---PIDGEFTGDVEIEEGKIVKV--------------EK 44
Query: 70 IIDLQSQILLPGFVNTHVH 88
+ +L+PGFV+ H+H
Sbjct: 45 RECIPRGVLMPGFVDPHIH 63
|
| >1xrt_A Dihydroorotase, dhoase; amidohydrolase, metalloenzyme, pyrimidine; 1.61A {Aquifex aeolicus} SCOP: b.92.1.3 c.1.9.6 PDB: 1xrf_A 3d6n_A* Length = 467 | Back alignment and structure |
|---|
Score = 49.1 bits (118), Expect = 8e-07
Identities = 17/70 (24%), Positives = 31/70 (44%), Gaps = 8/70 (11%)
Query: 19 STMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQIL 78
+I+ N ++ D + + V +IK I ++ +IID + I+
Sbjct: 47 LKLIVKNGYVI--DPSQNLEGEFDILVENGKIKKIDKNIL------VPEAEIIDAKGLIV 98
Query: 79 LPGFVNTHVH 88
PGF++ HVH
Sbjct: 99 CPGFIDIHVH 108
|
| >3mpg_A Dihydroorotase, dhoase; hydrolase; 2.60A {Bacillus anthracis} Length = 428 | Back alignment and structure |
|---|
Score = 46.7 bits (112), Expect = 4e-06
Identities = 12/69 (17%), Positives = 26/69 (37%), Gaps = 9/69 (13%)
Query: 20 TMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILL 79
+ N + E + V +I + ++ ++ID+ +++
Sbjct: 2 NYLFKNGRYMN---EEGKIVATDLLVQDGKIAKVAENIT------ADNAEVIDVNGKLIA 52
Query: 80 PGFVNTHVH 88
PG V+ HVH
Sbjct: 53 PGLVDVHVH 61
|
| >1gkr_A Hydantoinase, non-ATP dependent L-selective hydantoinase; hydrolase, dihydropyrimidinase, cyclic amidase; HET: KCX; 2.60A {Arthrobacter aurescens} SCOP: b.92.1.3 c.1.9.6 Length = 458 | Back alignment and structure |
|---|
Score = 46.4 bits (111), Expect = 5e-06
Identities = 15/68 (22%), Positives = 30/68 (44%), Gaps = 9/68 (13%)
Query: 21 MILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLP 80
+I+ N +V+ + + V ++ AI ++ A + ID + ++P
Sbjct: 4 VIVKNCRLVS---SDGITE-ADILVKDGKVAAISADTSDVE-----ASRTIDAGGKFVMP 54
Query: 81 GFVNTHVH 88
G V+ HVH
Sbjct: 55 GVVDEHVH 62
|
| >3e74_A Allantoinase; (beta/alpha)8-barrel domain, small beta-sheet domain, hydrolase, metal-binding, purine metabolism, zinc; HET: KCX; 2.10A {Escherichia coli} Length = 473 | Back alignment and structure |
|---|
Score = 46.5 bits (111), Expect = 6e-06
Identities = 16/68 (23%), Positives = 30/68 (44%), Gaps = 11/68 (16%)
Query: 21 MILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLP 80
+I+ N ++ ++ R + V +I AIGQ A +++D ++ P
Sbjct: 25 LIIKNGTVILENEA----RVVDIAVKGGKIAAIGQDLG-------DAKEVMDASGLVVSP 73
Query: 81 GFVNTHVH 88
G V+ H H
Sbjct: 74 GMVDAHTH 81
|
| >3gri_A Dihydroorotase, dhoase; hydrolase, IDP00795, metal-binding, pyrimidine biosynthesis, structural genomics; 2.00A {Staphylococcus aureus subsp} Length = 424 | Back alignment and structure |
|---|
Score = 46.3 bits (111), Expect = 6e-06
Identities = 16/69 (23%), Positives = 27/69 (39%), Gaps = 10/69 (14%)
Query: 21 MIL-HNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILL 79
M L N ++ + + + + IK I + + IID + +
Sbjct: 1 MKLIKNGKVLQNGELQQ----ADILIDGKVIKQIAPAIEPSN-----GVDIIDAKGHFVS 51
Query: 80 PGFVNTHVH 88
PGFV+ HVH
Sbjct: 52 PGFVDVHVH 60
|
| >1gkp_A Hydantoinase; hydrolase, dihydropyrimidinase, cyclic amidase; HET: KCX EPE; 1.29A {Thermus SP} SCOP: b.92.1.3 c.1.9.6 PDB: 1gkq_A* Length = 458 | Back alignment and structure |
|---|
Score = 46.0 bits (110), Expect = 8e-06
Identities = 15/68 (22%), Positives = 32/68 (47%), Gaps = 9/68 (13%)
Query: 21 MILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLP 80
+++ N I+T ++ ++ + I IGQ+ + ++ID + + P
Sbjct: 2 LLIKNGEIIT---ADSRYK-ADIYAEGETITRIGQNLEAPP-----GTEVIDATGKYVFP 52
Query: 81 GFVNTHVH 88
GF++ HVH
Sbjct: 53 GFIDPHVH 60
|
| >1onw_A Isoaspartyl dipeptidase; amidohydrolase, hydrolase, metalloprotease; HET: KCX; 1.65A {Escherichia coli} SCOP: b.92.1.7 c.1.9.13 PDB: 1onx_A* 1po9_A* 1poj_A* 1pok_B* 2aqo_A* 1ybq_A* 2aqv_A* Length = 390 | Back alignment and structure |
|---|
Score = 45.9 bits (109), Expect = 9e-06
Identities = 17/73 (23%), Positives = 29/73 (39%), Gaps = 8/73 (10%)
Query: 17 SSSTMIL-HNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQS 75
+++ L A + + V V +I A+ + ++DL
Sbjct: 5 TAAGFTLLQGAHLYAPED----RGICDVLVANGKIIAVA---SNIPSDIVPNCTVVDLSG 57
Query: 76 QILLPGFVNTHVH 88
QIL PGF++ HVH
Sbjct: 58 QILCPGFIDQHVH 70
|
| >3dc8_A Dihydropyrimidinase; TIM-barrel, hydrolase; HET: KCX; 1.85A {Sinorhizobium meliloti} Length = 490 | Back alignment and structure |
|---|
Score = 45.7 bits (109), Expect = 9e-06
Identities = 15/68 (22%), Positives = 24/68 (35%), Gaps = 12/68 (17%)
Query: 21 MILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLP 80
++ IVT D V V RI IG + + +D ++P
Sbjct: 3 TVIKGGTIVTADLT----YKADVKVEGGRIVEIGPNLS--------GAETLDATGCYVMP 50
Query: 81 GFVNTHVH 88
G ++ H H
Sbjct: 51 GGIDPHTH 58
|
| >2fty_A Dihydropyrimidinase; alpha/beta barrel, beta-sandwich, hydrolase; HET: KCX; 2.40A {Lachancea kluyveri} SCOP: b.92.1.3 c.1.9.6 PDB: 2fvk_A* 2fvm_A* Length = 559 | Back alignment and structure |
|---|
Score = 45.9 bits (109), Expect = 1e-05
Identities = 16/68 (23%), Positives = 31/68 (45%), Gaps = 9/68 (13%)
Query: 21 MILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLP 80
+I+ N +I T S ++ + V +++ I S D ++ID + + P
Sbjct: 5 LIIKNGIICT---ASDIYA-AEIAVNNGKVQLIAASIDPSL-----GSEVIDAEGAFITP 55
Query: 81 GFVNTHVH 88
G ++ HVH
Sbjct: 56 GGIDAHVH 63
|
| >2ftw_A Dihydropyrimidine amidohydrolase; (beta-alpha)8-barrel, beta-sandwich; HET: KCX; 2.05A {Dictyostelium discoideum} SCOP: b.92.1.3 c.1.9.6 Length = 521 | Back alignment and structure |
|---|
Score = 45.4 bits (108), Expect = 1e-05
Identities = 18/72 (25%), Positives = 36/72 (50%), Gaps = 9/72 (12%)
Query: 17 SSSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQ 76
+ T+++ N +V + R F+ V V IK I ++ + + +++D +
Sbjct: 6 QTGTILIKNGTVVN---DDRYFK-SDVLVENGIIKEISKNIEPKE-----GIKVVDATDK 56
Query: 77 ILLPGFVNTHVH 88
+LLPG ++TH H
Sbjct: 57 LLLPGGIDTHTH 68
|
| >3sfw_A Dihydropyrimidinase; hydrolase, zinc binding; HET: KCX; 1.73A {Brevibacillus agri} PDB: 1yny_A 1k1d_A* Length = 461 | Back alignment and structure |
|---|
Score = 44.9 bits (107), Expect = 2e-05
Identities = 16/69 (23%), Positives = 28/69 (40%), Gaps = 10/69 (14%)
Query: 20 TMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILL 79
+ N +VT S ++ V + +++ AIG ++ID LL
Sbjct: 2 KKWIRNGTVVT---ASDTYQ-ADVLIDGEKVVAIGSDLQA------TDAEVIDATGYYLL 51
Query: 80 PGFVNTHVH 88
PG ++ H H
Sbjct: 52 PGGIDPHTH 60
|
| >1rk6_A D-aminoacylase; TIM barrel, beta barrel, insertion, hydrolase; 1.43A {Alcaligenes faecalis} SCOP: b.92.1.6 b.92.1.6 c.1.9.11 PDB: 1rjp_A 1v51_A 1rjq_A 1rjr_A 1rk5_A 1v4y_A 1m7j_A Length = 496 | Back alignment and structure |
|---|
Score = 44.6 bits (105), Expect = 3e-05
Identities = 22/86 (25%), Positives = 36/86 (41%), Gaps = 12/86 (13%)
Query: 12 SGSLGSSSTM----ILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMA 67
GS+ IL ++ D + R V V DRI A+G + A
Sbjct: 10 HGSMSQPDATPFDYILSGGTVI--DGTNAPGRLADVGVRGDRIAAVGDLSA------SSA 61
Query: 68 DQIIDLQSQILLPGFVNTHVHTSQQL 93
+ ID+ +++ PGF+++H H L
Sbjct: 62 RRRIDVAGKVVSPGFIDSHTHDDNYL 87
|
| >2z00_A Dihydroorotase; zinc binding protein, hydrolase, metal-binding, pyrimidine biosynthesis, structural genomics, NPPSFA; 2.42A {Thermus thermophilus} Length = 426 | Back alignment and structure |
|---|
Score = 44.0 bits (105), Expect = 3e-05
Identities = 18/69 (26%), Positives = 27/69 (39%), Gaps = 13/69 (18%)
Query: 21 MIL-HNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILL 79
MIL N +V D V + + RI ++ A Q++D L
Sbjct: 1 MILIRNVRLV--DARGE-RGPADVLIGEGRILSLEGGE---------AKQVVDGTGCFLA 48
Query: 80 PGFVNTHVH 88
PGF++ H H
Sbjct: 49 PGFLDLHAH 57
|
| >1nfg_A D-hydantoinase; TIM barrel, hydrolase; HET: KCX; 2.70A {Ralstonia pickettii} SCOP: b.92.1.3 c.1.9.6 Length = 457 | Back alignment and structure |
|---|
Score = 44.1 bits (105), Expect = 3e-05
Identities = 16/68 (23%), Positives = 28/68 (41%), Gaps = 11/68 (16%)
Query: 21 MILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLP 80
+I+ N IVT D + + +I IG + A++ ID + + P
Sbjct: 3 IIIKNGTIVTADGI----SRADLGIKDGKITQIGGALG-------PAERTIDAAGRYVFP 51
Query: 81 GFVNTHVH 88
G ++ H H
Sbjct: 52 GGIDVHTH 59
|
| >2vr2_A Dihydropyrimidinase; hydantoinase, metal-binding, disease mutation, dihydropyrimi amidohydrolase, nucleotide metabolism, DPYS, dhpase, hydrolase; 2.80A {Homo sapiens} Length = 541 | Back alignment and structure |
|---|
Score = 43.9 bits (104), Expect = 4e-05
Identities = 14/72 (19%), Positives = 30/72 (41%), Gaps = 5/72 (6%)
Query: 17 SSSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQ 76
+ S +++ +V D V V ++A+G +++D +
Sbjct: 25 APSRLLIRGGRVVNDDFS----EVADVLVEDGVVRALGHDLLPPGGAPA-GLRVLDAAGK 79
Query: 77 ILLPGFVNTHVH 88
++LPG ++TH H
Sbjct: 80 LVLPGGIDTHTH 91
|
| >2vm8_A Dihydropyrimidinase-related protein 2; neurogenesis, phosphoprotein, differentiation, CRMP, cytoplasm, TIM barrel, polymorphism, axonal pathfinding; 1.9A {Homo sapiens} PDB: 2gse_A 1kcx_A Length = 501 | Back alignment and structure |
|---|
Score = 41.9 bits (99), Expect = 2e-04
Identities = 13/72 (18%), Positives = 32/72 (44%), Gaps = 9/72 (12%)
Query: 17 SSSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQ 76
+S +++ IV D+ +++ IK IG++ + + I+ S+
Sbjct: 24 TSDRLLIKGGKIVNDDQS----FYADIYMEDGLIKQIGENLIVPG-----GVKTIEAHSR 74
Query: 77 ILLPGFVNTHVH 88
+++PG ++ H
Sbjct: 75 MVIPGGIDVHTR 86
|
| >2ics_A Adenine deaminase; TIM barrel, binuclear zinc, adenine complex, amidohydrolase, structural genomics, PSI, protein structure initiative; HET: KCX ADE; 2.30A {Enterococcus faecalis} SCOP: b.92.1.8 c.1.9.14 Length = 379 | Back alignment and structure |
|---|
Score = 40.1 bits (93), Expect = 6e-04
Identities = 9/68 (13%), Positives = 23/68 (33%), Gaps = 12/68 (17%)
Query: 21 MILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLP 80
+++ N V + + + +I A+ + + I +
Sbjct: 7 LLIKNGQTVNG-------MPVEIAIKEKKIAAVAATIS-----GSAKETIHLEPGTYVSA 54
Query: 81 GFVNTHVH 88
G+++ HVH
Sbjct: 55 GWIDDHVH 62
|
| >3gip_A N-acyl-D-glutamate deacylase; amidohydrolase family, hydrolase; 1.50A {Bordetella bronchiseptica} PDB: 3giq_A* Length = 480 | Back alignment and structure |
|---|
Score = 40.0 bits (93), Expect = 7e-04
Identities = 15/70 (21%), Positives = 22/70 (31%), Gaps = 19/70 (27%)
Query: 37 VFRNGGVF-------------VVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFV 83
G + V RI AIG+ + A D +I+ PGF+
Sbjct: 10 KITGGWIIDGTGAPRRRADLGVRDGRIAAIGELG------AHPARHAWDASGKIVAPGFI 63
Query: 84 NTHVHTSQQL 93
+ H H
Sbjct: 64 DVHGHDDLMF 73
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 304 | |||
| 4aql_A | 476 | Guanine deaminase; hydrolase, purine metabolism; H | 100.0 | |
| 4dyk_A | 451 | Amidohydrolase; adenosine deaminase, nysgrc, struc | 100.0 | |
| 4dzh_A | 472 | Amidohydrolase; adenosine deaminase, nysgrc, struc | 100.0 | |
| 3lnp_A | 468 | Amidohydrolase family protein OLEI01672_1_465; TIM | 100.0 | |
| 4f0r_A | 447 | 5-methylthioadenosine/S-adenosylhomocysteine DEAM; | 100.0 | |
| 3h4u_A | 479 | Amidohydrolase; signature of Zn ligands, structura | 100.0 | |
| 3ls9_A | 456 | Triazine hydrolase; atrazine chlorohydrolase TRZN; | 100.0 | |
| 3v7p_A | 427 | Amidohydrolase family protein; iron binding site, | 100.0 | |
| 4f0l_A | 458 | Amidohydrolase; ssgcid, structural genomics, seatt | 100.0 | |
| 3mdu_A | 453 | N-formimino-L-glutamate iminohydrolase; amonohydra | 100.0 | |
| 2i9u_A | 439 | Cytosine/guanine deaminase related protein; protei | 100.0 | |
| 2paj_A | 492 | Putative cytosine/guanine deaminase; NYSGXRC, PSI- | 100.0 | |
| 2ood_A | 475 | BLR3880 protein; PSI-II, PSI-2, guanine deaminase, | 100.0 | |
| 2imr_A | 420 | Hypothetical protein DR_0824; zinc, NYSGXRC, PSI2, | 99.98 | |
| 3hpa_A | 479 | Amidohydrolase; signature of Zn ligands, structura | 99.97 | |
| 1p1m_A | 406 | Hypothetical protein TM0936; putative metal depend | 99.97 | |
| 1ra0_A | 430 | Cytosine deaminase; alpha-beta barrel, hexamer, co | 99.95 | |
| 3feq_A | 423 | Putative amidohydrolase; unknown source, sargasso | 99.94 | |
| 3gnh_A | 403 | L-lysine, L-arginine carboxypeptidase CC2672; N-me | 99.93 | |
| 2r8c_A | 426 | Putative amidohydrolase; unknown source, sargasso | 99.93 | |
| 2qt3_A | 403 | N-isopropylammelide isopropyl amidohydrolase; N-is | 99.92 | |
| 2qs8_A | 418 | XAA-Pro dipeptidase; amidohydrolase, TIM barrel, p | 99.91 | |
| 3be7_A | 408 | Zn-dependent arginine carboxypeptidase; unknown so | 99.9 | |
| 1yrr_A | 382 | N-acetylglucosamine-6-phosphate deacetylase; (beta | 99.89 | |
| 2bb0_A | 421 | Imidazolonepropionase; TIM barrel, hydrolase; 2.00 | 99.89 | |
| 2q09_A | 416 | Imidazolonepropionase; 9252H, NYSGXRC, 3-(2, 5-dio | 99.89 | |
| 2p9b_A | 458 | Possible prolidase; protein structure initiative I | 99.89 | |
| 2puz_A | 419 | Imidazolonepropionase; NYSGXRC, PSI-2, N-formimino | 99.88 | |
| 2vhl_A | 396 | N-acetylglucosamine-6-phosphate deacetylase; N- ac | 99.84 | |
| 3ooq_A | 396 | Amidohydrolase; structural genomics, protein struc | 99.83 | |
| 2fty_A | 559 | Dihydropyrimidinase; alpha/beta barrel, beta-sandw | 99.83 | |
| 2vr2_A | 541 | Dihydropyrimidinase; hydantoinase, metal-binding, | 99.81 | |
| 2vm8_A | 501 | Dihydropyrimidinase-related protein 2; neurogenesi | 99.8 | |
| 2vun_A | 386 | Enamidase; nicotinate degradation, binuclear metal | 99.79 | |
| 2ftw_A | 521 | Dihydropyrimidine amidohydrolase; (beta-alpha)8-ba | 99.79 | |
| 1gkp_A | 458 | Hydantoinase; hydrolase, dihydropyrimidinase, cycl | 99.79 | |
| 1e9y_B | 569 | Urease subunit beta; hydrolase, dodecamer; HET: KC | 99.78 | |
| 2ogj_A | 417 | Dihydroorotase; TIM barrel, binuclear zinc, imidaz | 99.78 | |
| 1gkr_A | 458 | Hydantoinase, non-ATP dependent L-selective hydant | 99.77 | |
| 3dc8_A | 490 | Dihydropyrimidinase; TIM-barrel, hydrolase; HET: K | 99.77 | |
| 1rk6_A | 496 | D-aminoacylase; TIM barrel, beta barrel, insertion | 99.77 | |
| 3sfw_A | 461 | Dihydropyrimidinase; hydrolase, zinc binding; HET: | 99.77 | |
| 3icj_A | 534 | Uncharacterized metal-dependent hydrolase; structu | 99.77 | |
| 1xrt_A | 467 | Dihydroorotase, dhoase; amidohydrolase, metalloenz | 99.76 | |
| 2ics_A | 379 | Adenine deaminase; TIM barrel, binuclear zinc, ade | 99.74 | |
| 3gri_A | 424 | Dihydroorotase, dhoase; hydrolase, IDP00795, metal | 99.74 | |
| 2z00_A | 426 | Dihydroorotase; zinc binding protein, hydrolase, m | 99.74 | |
| 3mpg_A | 428 | Dihydroorotase, dhoase; hydrolase; 2.60A {Bacillus | 99.74 | |
| 3gip_A | 480 | N-acyl-D-glutamate deacylase; amidohydrolase famil | 99.74 | |
| 3e74_A | 473 | Allantoinase; (beta/alpha)8-barrel domain, small b | 99.73 | |
| 1o12_A | 376 | N-acetylglucosamine-6-phosphate deacetylase; struc | 99.71 | |
| 3hm7_A | 448 | Allantoinase; metallo-dependent hydrolase, protein | 99.7 | |
| 4ac7_C | 570 | Urease subunit alpha; hydrolase, bacillus pasteuri | 99.69 | |
| 4ubp_C | 570 | Protein (urease (chain C)); bacillus pasteurii, ni | 99.69 | |
| 3iv8_A | 381 | N-acetylglucosamine-6-phosphate deacetylase; IDP01 | 99.68 | |
| 2gwn_A | 452 | Dihydroorotase; zinc-binding prote structural geno | 99.68 | |
| 3nqb_A | 608 | Adenine deaminase 2; PSI-II, structural genomics, | 99.68 | |
| 3mtw_A | 403 | L-arginine carboxypeptidase CC2672; hydrolase; HET | 99.67 | |
| 1onw_A | 390 | Isoaspartyl dipeptidase; amidohydrolase, hydrolase | 99.67 | |
| 3ggm_A | 81 | Uncharacterized protein BT9727_2919; bacillus cere | 99.66 | |
| 4gy7_A | 840 | Urease; JACK bean, hydrolase, ME binding, nickel; | 99.66 | |
| 1nfg_A | 457 | D-hydantoinase; TIM barrel, hydrolase; HET: KCX; 2 | 99.65 | |
| 3mkv_A | 426 | Putative amidohydrolase; sargasso SEA, structural | 99.62 | |
| 4ep8_C | 566 | Urease subunit alpha; alpha-beta barrel, nickel me | 99.51 | |
| 2pgf_A | 371 | Adenosine deaminase; metallo-dependent hydrolase, | 99.36 | |
| 3pao_A | 326 | Adenosine deaminase; structural genomics, PSI-2, p | 98.97 | |
| 3rys_A | 343 | Adenosine deaminase 1; SGX, hydrolase; HET: ADE; 2 | 98.88 | |
| 2vc7_A | 314 | Aryldialkylphosphatase; phosphotriesterase, promis | 98.69 | |
| 3iar_A | 367 | Adenosine deaminase; purine metabolism structural | 98.52 | |
| 2ob3_A | 330 | Parathion hydrolase; metalloenzyme, TIM barrel, ne | 98.34 | |
| 3tn4_A | 360 | Phosphotriesterase; lactonase, hydrolase; HET: KCX | 98.2 | |
| 1bf6_A | 291 | Phosphotriesterase homology protein; hypothetical | 98.16 | |
| 2z26_A | 347 | Dihydroorotase, dhoase; TIM barrel, hydrolase; HET | 98.06 | |
| 3pnu_A | 359 | Dihydroorotase; TIM barrel, zinc binding, hydrolas | 98.06 | |
| 2y1h_A | 272 | Putative deoxyribonuclease tatdn3; hydrolase; 2.50 | 97.74 | |
| 3ovg_A | 363 | Amidohydrolase; structural genomics, PSI-2, protei | 97.7 | |
| 3gtx_A | 339 | Organophosphorus hydrolase; mutant, amidohydrolase | 97.68 | |
| 3k2g_A | 364 | Resiniferatoxin-binding, phosphotriesterase- relat | 97.6 | |
| 3pnz_A | 330 | Phosphotriesterase family protein; amidohydrolase | 97.58 | |
| 1zzm_A | 259 | Putative deoxyribonuclease YJJV; hydrolaze, zinc, | 97.52 | |
| 1xwy_A | 264 | DNAse TATD, deoxyribonuclease TATD; TIM barrael, z | 97.3 | |
| 3rcm_A | 287 | TATD family hydrolase; HET: CIT; 2.05A {Pseudomona | 97.27 | |
| 4gxw_A | 380 | Adenosine deaminase; amidohydrolase, COG1816, EFI, | 97.26 | |
| 3ipw_A | 325 | Hydrolase TATD family protein; niaid, ssgcid, seat | 97.06 | |
| 4i6k_A | 294 | Amidohydrolase family protein; enzyme function ini | 96.87 | |
| 3guw_A | 261 | Uncharacterized protein AF_1765; alpha-beta protei | 96.82 | |
| 3lgd_A | 508 | Adenosine deaminase CECR1; TIM barrel, dimerizatio | 96.82 | |
| 3rhg_A | 365 | Putative phophotriesterase; hydrolase, amidohydrol | 96.74 | |
| 1j6o_A | 268 | TATD-related deoxyribonuclease; structural genomic | 96.62 | |
| 1yix_A | 265 | Deoxyribonuclease YCFH; TIM barrel, zinc ION, NEW | 96.44 | |
| 2xio_A | 301 | Putative deoxyribonuclease tatdn1; hydrolase; 1.19 | 96.42 | |
| 2ffi_A | 288 | 2-pyrone-4,6-dicarboxylic acid hydrolase, putativ; | 96.39 | |
| 2gzx_A | 265 | Putative TATD related DNAse; deoxyribonuclease, NE | 95.61 | |
| 3gg7_A | 254 | Uncharacterized metalloprotein; structural genomic | 95.47 | |
| 4d9a_A | 303 | 2-pyrone-4,6-dicarbaxylate hydrolase; structural g | 94.98 | |
| 2dvt_A | 327 | Thermophilic reversible gamma-resorcylate decarbo; | 94.93 | |
| 4do7_A | 303 | Amidohydrolase 2; enzyme function initiative, EFI, | 94.85 | |
| 2a3l_A | 701 | AMP deaminase, AMPD; atampd, AT2G38280, adenosine | 93.96 | |
| 3irs_A | 291 | Uncharacterized protein BB4693; structural genomic | 93.64 | |
| 3e2v_A | 401 | 3'-5'-exonuclease; structural genomics, hydrolase, | 92.71 | |
| 2f6k_A | 307 | Metal-dependent hydrolase; metal dependent hydroly | 91.55 | |
| 3cjp_A | 272 | Predicted amidohydrolase, dihydroorotase family; s | 87.41 | |
| 2gwg_A | 350 | 4-oxalomesaconate hydratase; TIM-barrel like prote | 86.0 | |
| 1nfg_A | 457 | D-hydantoinase; TIM barrel, hydrolase; HET: KCX; 2 | 82.91 |
| >4aql_A Guanine deaminase; hydrolase, purine metabolism; HET: TXC; 1.99A {Homo sapiens} PDB: 2uz9_A* 3e0l_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-40 Score=306.56 Aligned_cols=283 Identities=19% Similarity=0.277 Sum_probs=238.3
Q ss_pred cccEEEEccEEEecCC-CCceeeeeeEEEeC-CEEEEecCChhhh---hhhcCCCceEEeC-CCCEeeccccccCccchh
Q 022028 18 SSTMILHNAVIVTMDK-ESRVFRNGGVFVVQ-DRIKAIGQSADIL---QQFSQMADQIIDL-QSQILLPGFVNTHVHTSQ 91 (304)
Q Consensus 18 ~~~~li~~~~ii~~~~-~~~~~~~~~I~I~~-g~I~~i~~~~~~~---~~~~~~~~~vID~-~g~iv~PG~ID~H~Hl~~ 91 (304)
+..++|++..|.+... +..++++++|+|+| |||++|++..+++ ..++..+.++||+ +|++|+|||||+|+|+.+
T Consensus 30 ~~~~~~~g~~i~~~~~~~~~~~~~~~v~I~~~g~I~~vg~~~~~~~~~~~~~~~~~~viD~~~g~~v~PG~ID~H~H~~~ 109 (476)
T 4aql_A 30 PLAHIFRGTFVHSTWTCPMEVLRDHLLGVSDSGKIVFLEEASQQEKLAKEWCFKPCEIRELSHHEFFMPGLVDTHIHASQ 109 (476)
T ss_dssp -CCEEEEEEEEECCSSCSCEEEEEEEEEECTTSBEEEEEEGGGHHHHHHHTTCCGGGCEECCTTCEEEECEEEEEEEGGG
T ss_pred CccEEEEccEEecCCCCceeEecCcEEEEecCCeEEEecCcchhhhhhhhccCCCceEEEcCCCCEEeCCeeccccchHH
Confidence 3457889999987643 45678999999998 9999999875431 1122235689995 589999999999999999
Q ss_pred hhhhcccCCCCccccccccccCccCCCChHHHHHHHHHH-HHHHHhcCcceeecCCCCCHHH---HHHHHHHcCCeEEee
Q 022028 92 QLAKGIADDVDLMTWLHDRIWPYESNMTEEDSYISTLLC-GIELIHSGVTCFAEAGGQHVSE---MAKAVELLGLRACLV 167 (304)
Q Consensus 92 s~~~g~~~~~~~~~~l~~~~~~~~~~~~~e~~~~~~~~~-~~~~l~~GvTtv~d~~~~~~~~---~~~~~~~~gir~~~~ 167 (304)
+.+||...+.++.+|+...+|+.+..+++++.+...... +.+++++||||+.++...+.+. +.+++.+.|+|.+++
T Consensus 110 ~~~rg~~~d~~l~~wL~~~~~p~e~~~~~~~~~~~~~~~~~~e~l~~G~Tt~~~~~~~~~~~~~~~~~a~~~~G~r~~~~ 189 (476)
T 4aql_A 110 YSFAGSSIDLPLLEWLTKYTFPAEHRFQNIDFAEEVYTRVVRRTLKNGTTTACYFATIHTDSSLLLADITDKFGQRAFVG 189 (476)
T ss_dssp GGGTTSCCCSCHHHHHHHTHHHHHHGGGSHHHHHHHHHHHHHHHHHTTEEEEEEECCSCHHHHHHHHHHHHHHTCEEEEE
T ss_pred HHHHHHhcCCCHHHHHHHhhhhHHHhcCCHHHHHHHHHHHHHHHHHCCeeEEEEecccCchHHHHHHHHHHHhCCEEEEe
Confidence 999999999999999999999999888888766555444 5789999999999886555543 688899999999999
Q ss_pred cccccCCCCCCCCcccCChHHHHHHHHHHHHHHcCCCCCCeEEEEeeCcccCCCHHHHHHHHHHHHHhCCeeeEEecCCh
Q 022028 168 QSTMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIP 247 (304)
Q Consensus 168 ~~~~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~e~l~~~~~~a~~~~~~~~~H~~E~~ 247 (304)
+.+++.+... +. .....++.+++.++++++|....++++++.++|+.+++++++.++++.++|+++|+++++|++|+.
T Consensus 190 ~~~~d~~~~~-p~-~~~~~~~~l~~~~~~i~~~~~~~~~~v~~~l~p~~~~~~s~e~l~~~~~~A~~~g~~v~~H~~e~~ 267 (476)
T 4aql_A 190 KVCMDLNDTF-PE-YKETTEESIKETERFVSEMLQKNYSRVKPIVTPRFSLSCSETLMGELGNIAKTRDLHIQSHISENR 267 (476)
T ss_dssp CEECSCCSSC-TT-SCCCHHHHHHHHHHHHHHHHHHTCSSEEECBEECCTTTSCHHHHHHHHHHHHHTTCCEEEEESCSH
T ss_pred eccccCCCCC-cc-cccCHHHHHHHHHHHHHHHhcCCCCceEEEEeCCcCCcCCHHHHHHHHHHHHHcCCceEEEecCCH
Confidence 9988865322 23 344677888899999999876666889999999999999999999999999999999999999999
Q ss_pred hhHHHHHHhcCCCCCHHHHHHHhCCCCCCeeEEEeccCCcchhc-----------ccccccccccc
Q 022028 248 YENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEVN-----------CTFGNFKYAVH 302 (304)
Q Consensus 248 ~~~~~~~~~~g~~~~~~~~l~~~g~l~~~~~~~H~~~l~~~di~-----------~p~sN~~l~~~ 302 (304)
.+.+.+++.||...++++++++.|+++++++++||++++++|++ ||.||.++++.
T Consensus 268 ~e~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~H~~~l~~~~~~~l~~~g~~v~~~P~sn~~l~~g 333 (476)
T 4aql_A 268 DEVEAVKNLYPSYKNYTSVYDKNNLLTNKTVMAHGCYLSAEELNVFHERGASIAHCPNSNLSLSSG 333 (476)
T ss_dssp HHHHHHHHHCTTSSSHHHHHHTTTCCSTTEEEEECTTCCHHHHHHHHHHTCEEEECHHHHHHTTCC
T ss_pred HHHHHHHHHhCCCCCHHHHHHHcCCCCCCEEEEeCCCCCHHHHHHHHHcCCEEEECchhhhhhCcc
Confidence 99999999998733499999999999999999999999999987 99999998764
|
| >4dyk_A Amidohydrolase; adenosine deaminase, nysgrc, structural GENO PSI-biology, NEW YORK structural genomics research consorti hydrolase; 2.00A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-39 Score=299.53 Aligned_cols=273 Identities=26% Similarity=0.426 Sum_probs=236.9
Q ss_pred CcccEEEEccEEEecCCCCceeeeeeEEEeCCEEEEecCChhhhhhhcCCCceEEeCCCCEeeccccccCccchhhhhhc
Q 022028 17 SSSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKG 96 (304)
Q Consensus 17 ~~~~~li~~~~ii~~~~~~~~~~~~~I~I~~g~I~~i~~~~~~~~~~~~~~~~vID~~g~iv~PG~ID~H~Hl~~s~~~g 96 (304)
++.+++|+|++|+++++...++++++|+|+||||++|++..+. .. ..+.++||++|++|+|||||+|+|+.++.++|
T Consensus 6 ~~~~~li~~~~v~~~~~~~~~~~~~~v~i~~g~I~~ig~~~~~-~~--~~~~~viD~~g~~v~PG~ID~H~H~~~~~~~g 82 (451)
T 4dyk_A 6 NPFDLLLLPTWIVPVEPAGVVLRDHALGIRDGQIALVAPREQA-MR--HGATEIRELPGMLLAPGLVNAHGHSAMSLFRG 82 (451)
T ss_dssp CCEEEEEEEEEECCSSSTTCCEESEEEEEETTEEEEEEEHHHH-TT--TCEEEEEEEEEEEEEECEEECCCCGGGGGGTT
T ss_pred chhcEEEECCEEEeeCCCCcEEeccEEEEECCEEEEEeCcccc-cc--CCCCeEEeCCCCEEeecccchhhChhhHHhcc
Confidence 4567899999999987666788999999999999999986643 11 23568999999999999999999999999999
Q ss_pred ccCCCCccccccccccCccC-CCChHHHHHHHHHHHHHHHhcCcceeecCCCCCHHHHHHHHHHcCCeEEeecccccCCC
Q 022028 97 IADDVDLMTWLHDRIWPYES-NMTEEDSYISTLLCGIELIHSGVTCFAEAGGQHVSEMAKAVELLGLRACLVQSTMDCGE 175 (304)
Q Consensus 97 ~~~~~~~~~~l~~~~~~~~~-~~~~e~~~~~~~~~~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~gir~~~~~~~~d~g~ 175 (304)
...+.++.+|+...+|+.+. .+++++.+..++.++.+++++||||++|+. ...+.+.+++.+.|+|.+++..+++..
T Consensus 83 ~~~~~~l~~wl~~~~~~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~d~~-~~~~~~~~a~~~~g~r~~~~~~~~~~~- 160 (451)
T 4dyk_A 83 LADDLPLMTWLQDHIWPAEGQWVSEDFIRDGTELAIAEQVKGGITCFSDMY-FYPQAICGVVHDSGVRAQVAIPVLDFP- 160 (451)
T ss_dssp SSCSSCHHHHHHHTHHHHHHHHCSHHHHHHHHHHHHHHHHHTTEEEEEEEC-SCHHHHHHHHHHHTCEEEEEEEECSSC-
T ss_pred CCCCCCHHHHHHHhhhhhhhccCCHHHHHHHHHHHHHHHHhCCcEEEEEcc-cCHHHHHHHHHHcCCeEEEEchhhCCC-
Confidence 98888999999988887765 488999999999999999999999999985 567788899999999999888777632
Q ss_pred CCCCCcccCChHHHHHHHHHHHHHHcCCCCCCeEEEEeeCcccCCCHHHHHHHHHHHHHhCCeeeEEecCChhhHHHHHH
Q 022028 176 GLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMD 255 (304)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~e~l~~~~~~a~~~~~~~~~H~~E~~~~~~~~~~ 255 (304)
.. .....++.++...++++.+.. .+.+++.++++.+++++++.+++++++|+++|+++++|+.|+..+.+.+.+
T Consensus 161 ---~~-~~~~~~~~~~~~~~~~~~~~~--~~~v~~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~~e~~~~~~~~~~ 234 (451)
T 4dyk_A 161 ---IP-GARDSAEAIRQGMALFDDLKH--HPRIRIAFGPHAPYTVSDDKLEQILVLTEELDASIQMHVHETAFEVEQAME 234 (451)
T ss_dssp ---BT-TBSSHHHHHHHHHHHHHHTTT--CSSEEEEEEECCGGGSCHHHHHHHHHHHHHHTCCEEEEESCCHHHHHHHHH
T ss_pred ---Cc-cccCHHHHHHHHHHHHHHhcC--CCceEEEEecCCCCccCHHHHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHH
Confidence 11 123456777778888888764 478999999999999999999999999999999999999999999999999
Q ss_pred hcCCCCCHHHHHHHhCCCCCCeeEEEeccCCcchhc-----------ccccccccccc
Q 022028 256 TRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEVN-----------CTFGNFKYAVH 302 (304)
Q Consensus 256 ~~g~~~~~~~~l~~~g~l~~~~~~~H~~~l~~~di~-----------~p~sN~~l~~~ 302 (304)
.+|.. +++++.+.|++++++++.||+++++++++ ||.||.+++..
T Consensus 235 ~~g~~--~i~~~~~~g~~~~~~~~~H~~~~~~~~~~~l~~~g~~v~~~p~s~~~~~~~ 290 (451)
T 4dyk_A 235 RNGER--PLARLHRLGLLGPRFQAVHMTQVDNDDLAMLVETNSSVIHCPESNLKLASG 290 (451)
T ss_dssp HHSSC--HHHHHHHTTCCSTTEEEEECCCCCHHHHHHHHHHTCEEEECHHHHHHTTCC
T ss_pred HhCCC--HHHHHHHCCCCCCCeEEEECCCCCHHHHHHHHHcCCEEEEChhhhhhccCC
Confidence 99975 99999999999999999999999999987 99999988753
|
| >4dzh_A Amidohydrolase; adenosine deaminase, nysgrc, structural GENO YORK structural genomics research consortium; 1.55A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-39 Score=300.58 Aligned_cols=273 Identities=23% Similarity=0.373 Sum_probs=237.5
Q ss_pred cccEEEEccEEEecCCCCceeeeeeEEEeCCEEEEecCChhhhhhhcCCCceEEeCCCCEeeccccccCccchhhhhhcc
Q 022028 18 SSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGI 97 (304)
Q Consensus 18 ~~~~li~~~~ii~~~~~~~~~~~~~I~I~~g~I~~i~~~~~~~~~~~~~~~~vID~~g~iv~PG~ID~H~Hl~~s~~~g~ 97 (304)
..+++|+|++|+++++...++++++|+|+||||++|++..+.+..++ +.++||++|++|+|||||+|+|+.++.++|.
T Consensus 13 ~~d~li~~~~v~~~~~~~~~~~~~~v~I~~g~I~~vg~~~~~~~~~~--~~~viD~~g~~v~PGlID~H~Hl~~~~~~g~ 90 (472)
T 4dzh_A 13 PCDLLIEAGYVVPIEPHAVVLEDHAVAVSNGVIVAVLPTADARVRFA--PARTVSRPDAALMPGLVNAHTHNPMTLLRGV 90 (472)
T ss_dssp EEEEEEEEEEECCSSSTTCCEEEEEEEEETTEEEEEEEHHHHHHHEE--EEEEEEEEEEEEEECEEEEEECGGGGGGTTS
T ss_pred cCcEEEECCEEEecCCCCcEecceEEEEECCEEEEEeCchhhhhcCC--CCeEEeCCCcEEEECccccccChhhHHhccc
Confidence 35689999999998866678899999999999999998765432222 5689999999999999999999999999998
Q ss_pred cCCCCccccccccccCccC-CCChHHHHHHHHHHHHHHHhcCcceeecCCCCCHHHHHHHHHHcCCeEEeecccccCCCC
Q 022028 98 ADDVDLMTWLHDRIWPYES-NMTEEDSYISTLLCGIELIHSGVTCFAEAGGQHVSEMAKAVELLGLRACLVQSTMDCGEG 176 (304)
Q Consensus 98 ~~~~~~~~~l~~~~~~~~~-~~~~e~~~~~~~~~~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~gir~~~~~~~~d~g~~ 176 (304)
..+.++.+|+...+|+.+. .+++++.+..++.++.+++++||||+.|++ ...+...+++.+.|+|.+++..+++..
T Consensus 91 ~~~~~l~~~l~~~~~~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~d~~-~~~~~~~~a~~~~g~r~~~~~~~~~~~-- 167 (472)
T 4dzh_A 91 ADDLPLMVWLQQHIWPVEAAVIGPEFVADGTTLAIAEMLRGGTTCVNENY-FFADVQAAVYKQHGFRALVGAVIIDFP-- 167 (472)
T ss_dssp SCSCCHHHHHHHTHHHHHHHHCSHHHHHHHHHHHHHHHHHTTEEEEEEEC-SCHHHHHHHHHHTTCEEEEEEEECSSC--
T ss_pred cCCCCHHHHHHHhhhhhhhccCCHHHHHHHHHHHHHHHHhCCcEEEEEcc-cCHHHHHHHHHHhCCeEEEEecccCCC--
Confidence 8889999999988887754 488999999999999999999999999987 567788899999999998887766532
Q ss_pred CCCCcccCChHHHHHHHHHHHHHHcCCCCCCeEEEEeeCcccCCCHHHHHHHHHHHHHhCCeeeEEecCChhhHHHHHHh
Q 022028 177 LPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDT 256 (304)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~e~l~~~~~~a~~~~~~~~~H~~E~~~~~~~~~~~ 256 (304)
.. .....++.++..+++++.+.. .+.+++.++++.+++++++.+++++++|+++|+++++|+.|+..+.+.+.+.
T Consensus 168 --~~-~~~~~~~~~~~~~~~~~~~~~--~~~i~~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~iH~~e~~~~~~~~~~~ 242 (472)
T 4dzh_A 168 --TA-WASSDDEYFARAGELHDQWRD--DPLISTAFAPHAPYTVNDANFERVRMLADQLDMPVHLHTHETAQEVADSVAQ 242 (472)
T ss_dssp --CS-SCSSHHHHHHHHHHHHHHHTT--CSSEEEEEEECCTTTSCHHHHHHHHHHHHHHTCCEEEEESCCHHHHHHHHHH
T ss_pred --cc-cccCHHHHHHHHHHHHHHhCC--CCceEEEEecCCCCCCCHHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHH
Confidence 22 223466777888888888865 4789999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCHHHHHHHhCCCCCCeeEEEeccCCcchhc-----------ccccccccccc
Q 022028 257 RKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEVN-----------CTFGNFKYAVH 302 (304)
Q Consensus 257 ~g~~~~~~~~l~~~g~l~~~~~~~H~~~l~~~di~-----------~p~sN~~l~~~ 302 (304)
+|.. +++++.+.|++++++++.||+++++++++ ||.||.+++..
T Consensus 243 ~g~~--~i~~~~~~g~~~~~~~~~H~~~l~~~~i~~l~~~g~~v~~~p~s~~~~~~~ 297 (472)
T 4dzh_A 243 YGQR--PLARLDRLGLVNDRLIAVHMTQLTEAEIHLCAERGVSVVHCPESNLKLASG 297 (472)
T ss_dssp HSSC--HHHHHHHHTCCSTTEEEEECCSCCHHHHHHHHHHTCEEEECHHHHHHTTCC
T ss_pred hCCC--HHHHHHHcCCCCCCeEEEeccCCCHHHHHHHHHcCCEEEEChHHHHhcCCC
Confidence 9975 99999999999999999999999999987 99999988754
|
| >3lnp_A Amidohydrolase family protein OLEI01672_1_465; TIM barrel, beta-fold, structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.10A {Oleispira antarctica} | Back alignment and structure |
|---|
Probab=100.00 E-value=9.9e-39 Score=295.11 Aligned_cols=273 Identities=25% Similarity=0.411 Sum_probs=234.8
Q ss_pred cccEEEEccEEEecCCCC------ceeeeeeEEEeCCEEEEecCChhhhhhhcCCCceEEeCCCCEeeccccccCccchh
Q 022028 18 SSTMILHNAVIVTMDKES------RVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQ 91 (304)
Q Consensus 18 ~~~~li~~~~ii~~~~~~------~~~~~~~I~I~~g~I~~i~~~~~~~~~~~~~~~~vID~~g~iv~PG~ID~H~Hl~~ 91 (304)
+++++|+|++|+++++.. .++++++|+|+||||++|++..+. ...+.++||++|++|+|||||+|+|+.+
T Consensus 22 ~~~~li~~~~v~~~~~~~~~~~~~~~~~~~~v~i~~g~I~~vg~~~~~----~~~~~~viD~~g~~v~PGlID~H~H~~~ 97 (468)
T 3lnp_A 22 HADLRINSHWIIPIENTTDHNLVSNILIDHCLLIKDGIILAIEPQSSC----QIPATETLDLGQQVLMPGWVNAHGHAAM 97 (468)
T ss_dssp CEEEEEEEEEECCSSCC-----CCSCEEEEEEEEETTEEEEEEETTTC----CCCEEEEEECCSEEEEECEEECSCCGGG
T ss_pred cccEEEECCEEEeecCCcccccCccEecceEEEEECCEEEEEeCCccc----cCCCCeEEeCCCcEEEeCeechhhChhh
Confidence 456899999999988665 678999999999999999986541 1235689999999999999999999999
Q ss_pred hhhhcccCCCCccccccccccCccC-CCChHHHHHHHHHHHHHHHhcCcceeecCCCCCHHHHHHHHHHcCCeEEeeccc
Q 022028 92 QLAKGIADDVDLMTWLHDRIWPYES-NMTEEDSYISTLLCGIELIHSGVTCFAEAGGQHVSEMAKAVELLGLRACLVQST 170 (304)
Q Consensus 92 s~~~g~~~~~~~~~~l~~~~~~~~~-~~~~e~~~~~~~~~~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~gir~~~~~~~ 170 (304)
+.++|...+.++.+|+...+|+.+. .+++++.+..++.++.+++++||||+.|+. ...+.+.+++.+.|+|.+++..+
T Consensus 98 ~~~~g~~~~~~l~~wl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTtv~d~~-~~~~~~~~~~~~~g~r~~~~~~~ 176 (468)
T 3lnp_A 98 SLFRGLADDLPLMTWLQEHVWPAEAQHVDEHFVKQGTELAIAEMIQSGTTTFADMY-FYPQQSGEAALAAGIRAVCFAPV 176 (468)
T ss_dssp GGGTTSSCSCCHHHHHHHTHHHHHHHHCSHHHHHHHHHHHHHHHHHTTEEEEEECC-SCHHHHHHHHHHHTCEEEEEEEE
T ss_pred hhhccCcCCCCHHHHHHHhhhhhhhccCCHHHHHHHHHHHHHHHHhCCcEEEEEcc-cCHHHHHHHHHHcCCeEEEeccc
Confidence 9999988888999999988887655 488899999999999999999999999986 55677888999999999888777
Q ss_pred ccCCCCCCCCcccCChHHHHHHHHHHHHHHcCCC---CCCeEEEEeeCcccCCCHHHHHHHHHHHHHhCCeeeEEecCCh
Q 022028 171 MDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAA---DGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIP 247 (304)
Q Consensus 171 ~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~i~~~~~~~~~~~~~~e~l~~~~~~a~~~~~~~~~H~~E~~ 247 (304)
++.. .. .....++.++..+++++.+.... .+.+++.++++.++.++++.+++++++|+++|+++++|+.|+.
T Consensus 177 ~~~~----~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~~e~~ 251 (468)
T 3lnp_A 177 LDFP----TN-YAQNADEYIRKAIECNDRFNNHPMNEQGLVQIGFGPHAPYTVSDEPLKEITMLSDQLDMPVQIHLHETD 251 (468)
T ss_dssp CSSC----CS-SCSSHHHHHHHHHHHHHHHHSCGGGTTCCEEEEEEECCTTTSCHHHHHHHHHHHHHHTCCEEEEESCSH
T ss_pred cCCC----cc-cccCHHHHHHHHHHHHHHhhcCCcccCceEEEEEEcCCCCCCCHHHHHHHHHHHHHcCCcEEEEeCCCH
Confidence 6532 11 12346677788888888887643 4588999999999999999999999999999999999999999
Q ss_pred hhHHHHHHhcCCCCCHHHHHHHhCCCCCCeeEEEeccCCcchhc-----------ccccccccccc
Q 022028 248 YENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEVN-----------CTFGNFKYAVH 302 (304)
Q Consensus 248 ~~~~~~~~~~g~~~~~~~~l~~~g~l~~~~~~~H~~~l~~~di~-----------~p~sN~~l~~~ 302 (304)
.+.+.+.+.+|.. +++++++.|++++++++.||+++++++++ ||.+|.+++..
T Consensus 252 ~~~~~~~~~~g~~--~i~~~~~~g~l~~~~~~~H~~~~~~~~~~~l~~~g~~v~~~p~s~~~~~~~ 315 (468)
T 3lnp_A 252 FEVSESLETFNKR--PTQRLADIGFLNERVSCVHMTQVDDGDIKILQKTGASIIHCPESNLKLASG 315 (468)
T ss_dssp HHHHHHHHHHSSC--HHHHHHHTTCCSTTEEEEECCSCCHHHHHHHHHHCCEEEECHHHHHHTTCC
T ss_pred HHHHHHHHHhCCC--HHHHHHHcCCCCCCeEEEeccCCCHHHHHHHHhcCCEEEEChhhhhhcCCC
Confidence 9999999989985 99999999999999999999999999987 99999888754
|
| >4f0r_A 5-methylthioadenosine/S-adenosylhomocysteine DEAM; structural genomics, PSI-biology; HET: MSE MTA; 1.80A {Chromobacterium violaceum} PDB: 4f0s_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-38 Score=293.06 Aligned_cols=273 Identities=24% Similarity=0.352 Sum_probs=234.0
Q ss_pred CcccEEEEccEEEecCCCCceeeeeeEEEeCCEEEEecCChhhhhhhcCCCceEEeCCCCEeeccccccCccchhhhhhc
Q 022028 17 SSSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKG 96 (304)
Q Consensus 17 ~~~~~li~~~~ii~~~~~~~~~~~~~I~I~~g~I~~i~~~~~~~~~~~~~~~~vID~~g~iv~PG~ID~H~Hl~~s~~~g 96 (304)
|+.+++|+|++|+++++...++.+++|+|+||||++|++..+.+ . ..+.++||++|++|+|||||+|+|+.++.++|
T Consensus 4 ~~~~~li~~~~v~~~~~~~~~~~~~~v~i~~g~I~~vg~~~~~~-~--~~~~~viD~~g~~v~PGlID~H~Hl~~~~~~g 80 (447)
T 4f0r_A 4 SRYEKIISARWIITVETDGEVLENHAIAIRDGKIAAIIPAADAA-G--LEADERLELPDHVLMPGLINLHGHSAMSLLRG 80 (447)
T ss_dssp -CEEEEEEEEEEECCSSTTCEEEEEEEEEETTEEEEEEEHHHHT-T--SCEEEEEEEEEEEEEECEEEEEECGGGGGGTT
T ss_pred CcccEEEECCEEEeeCCCCcEeeceEEEEECCEEEEEecccccc-c--CCCCeEEeCCCcEEeeCccchhhChhhHhhcc
Confidence 55678999999999887667889999999999999999876532 1 23568999999999999999999999999999
Q ss_pred ccCCCCccccccccccCccC-CCChHHHHHHHHHHHHHHHhcCcceeecCCCCCHHHHHHHHHHcCCeEEeecccccCCC
Q 022028 97 IADDVDLMTWLHDRIWPYES-NMTEEDSYISTLLCGIELIHSGVTCFAEAGGQHVSEMAKAVELLGLRACLVQSTMDCGE 175 (304)
Q Consensus 97 ~~~~~~~~~~l~~~~~~~~~-~~~~e~~~~~~~~~~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~gir~~~~~~~~d~g~ 175 (304)
...+.++.+|+...+|+.+. .+++++.+..++.++.+++++||||+.++. ...+...+++.+.|+|.+++..+.+..
T Consensus 81 ~~~~~~~~~wl~~~~~~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~d~~-~~~~~~~~~~~~~g~r~~~~~~~~~~~- 158 (447)
T 4f0r_A 81 LADDKALMDWLTNYIWPTEGKHVHDDFVFDGSLLAMGEMIRGGTTTINDMY-FYNAAVARAGLASGMRTFVGCSILEFP- 158 (447)
T ss_dssp SSCSSCHHHHHHHTHHHHHHHHCSHHHHHHHHHHHHHHHHHTTEEEEEECB-SCHHHHHHHHHHHTCEEEEEEEECSSC-
T ss_pred CCCCCCHHHHHHHhhhhhhhccCCHHHHHHHHHHHHHHHHhCCcEEEEEcc-cCHHHHHHHHHHcCCeEEEEchhcCCC-
Confidence 88888999999988887654 478999999999999999999999999986 557778888999999998887766532
Q ss_pred CCCCCcccCChHHHHHHHHHHHHHHcCCCCCCeEEEEeeCcccCCCHHHHHHHHHHHHHhCCeeeEEecCChhhHHHHHH
Q 022028 176 GLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMD 255 (304)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~e~l~~~~~~a~~~~~~~~~H~~E~~~~~~~~~~ 255 (304)
.. .....++.++..+++++++.. .+.+++.++++.++.++++.+++++++|+++|+++++|+.|+..+.+.+.+
T Consensus 159 ---~~-~~~~~~~~~~~~~~~~~~~~~--~~~i~~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~iH~~~~~~~~~~~~~ 232 (447)
T 4f0r_A 159 ---TN-YASNADDYIAKGMAERSQFLG--EDLLTFTLAPHAPYTVSDDTFRKVVTLAEQEDMLIHCHIHETADEVNNSVK 232 (447)
T ss_dssp ---CS-SCSSHHHHHHHHHHHHHTTTT--CTTEEEEEEECCGGGSCHHHHHHHHHHHHHHTCCEEEEESCCHHHHHHHHH
T ss_pred ---cc-cccCHHHHHHHHHHHHHHhcC--CCceEEEEecCCCCCCCHHHHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHH
Confidence 11 123456777777788777653 478899999999999999999999999999999999999999988999998
Q ss_pred hcCCCCCHHHHHHHhCCCCCCeeEEEeccCCcchhc-----------ccccccccccc
Q 022028 256 TRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEVN-----------CTFGNFKYAVH 302 (304)
Q Consensus 256 ~~g~~~~~~~~l~~~g~l~~~~~~~H~~~l~~~di~-----------~p~sN~~l~~~ 302 (304)
.+|.. +++++++.|+++++.++.||+++++++++ ||.+|.+++..
T Consensus 233 ~~g~~--~i~~~~~~g~~~~~~~~~H~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~ 288 (447)
T 4f0r_A 233 EHGQR--PLARLQRLGLLSPRLVAAHMVHLNDAEVELAARHGLSTAHNPASNMKLASG 288 (447)
T ss_dssp HHSSC--HHHHHHHHTCCSTTEEEEECCSCCHHHHHHHHHHTCEEEECHHHHHHTTCC
T ss_pred HcCCC--HHHHHHHcCCCCCCcEEEeccCCCHHHHHHHHHcCCEEEECchhhhhcCCC
Confidence 89885 99999999999999999999999999887 99999887653
|
| >3ls9_A Triazine hydrolase; atrazine chlorohydrolase TRZN; 1.40A {Arthrobacter aurescens} PDB: 3lsc_A* 3lsb_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-37 Score=286.39 Aligned_cols=273 Identities=20% Similarity=0.292 Sum_probs=230.7
Q ss_pred EEEEcc-EEEecCCCCceeeeeeEEEeCCEEEEecCChhhhhhhcCCCceEEeCCCCEeeccccccCccchhhhhhcccC
Q 022028 21 MILHNA-VIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIAD 99 (304)
Q Consensus 21 ~li~~~-~ii~~~~~~~~~~~~~I~I~~g~I~~i~~~~~~~~~~~~~~~~vID~~g~iv~PG~ID~H~Hl~~s~~~g~~~ 99 (304)
++|+|+ .|+++++...++++++|+|+||||++|++..+. +.+.++||++|++|+|||||+|+|+.++.+||..+
T Consensus 2 ~li~n~~~v~t~d~~~~~~~~~~v~i~~g~I~~vg~~~~~-----~~~~~viD~~g~~v~PG~ID~H~H~~~~~~~g~~~ 76 (456)
T 3ls9_A 2 ILIRGLTRVITFDDQERELEDADILIDGPKIVAVGKDLSD-----RSVSRTIDGRGMIALPGLINSHQHLYEGAMRAIPQ 76 (456)
T ss_dssp EEEEEEEEEECCCTTCCEEEEEEEEEETTEEEEEESSCCC-----TTCSEEEECTTEEEEECEEEEEECGGGGGGBTCGG
T ss_pred EEEEcCcEEEEcCCCCceeccceEEEECCEEEEeCCCCCC-----CCCCeEEeCCCCEEecCeeecccccchhhhccccc
Confidence 689999 888888767788999999999999999987431 23578999999999999999999999999998754
Q ss_pred --CCCcccccccc------ccCccCCCChHHHHHHHHHHHHHHHhcCcceeecCCC--------CCHHHHHHHHHHcCCe
Q 022028 100 --DVDLMTWLHDR------IWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGG--------QHVSEMAKAVELLGLR 163 (304)
Q Consensus 100 --~~~~~~~l~~~------~~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~d~~~--------~~~~~~~~~~~~~gir 163 (304)
+.++.+|+... +++. ..+++++++..++.++.+++++||||+.++.. ...+...+++.+.|+|
T Consensus 77 ~~~~~l~~~l~~~~~~~~~~~~~-~~~~~e~~~~~~~~~~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~~~~a~~~~g~r 155 (456)
T 3ls9_A 77 LERVTMASWLEGVLTRSAGWWRD-GKFGPDVIREVARAVLLESLLGGITTVADQHLFFPGATADSYIDATIEAATDLGIR 155 (456)
T ss_dssp GSSCCHHHHHHHHHHHHHHHHHT-TSSSHHHHHHHHHHHHHHHHHTTEEEEEEEECCCCSSSCCTHHHHHHHHHHHHTCE
T ss_pred CCCCCHHHHHHHhcccccccccc-ccCCHHHHHHHHHHHHHHHHhCCeeEEEeccccccCcccchhHHHHHHHHHHcCCE
Confidence 78899999876 3332 26899999999999999999999999998732 1234568889999999
Q ss_pred EEeecccccCC---CCCCCCcccCChHHHHHHHHHHHHHHcCC-CCCCeEEEEeeCcccCCCHHHHHHHHHHHHHhCCee
Q 022028 164 ACLVQSTMDCG---EGLPASWAVRTTDDCIQSQKELYAKHHHA-ADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGI 239 (304)
Q Consensus 164 ~~~~~~~~d~g---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~~e~l~~~~~~a~~~~~~~ 239 (304)
.+++...++.+ .+.++........+.++...++++.+... ..+.+.+.++++++++++++.+++++++|+++|+++
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v 235 (456)
T 3ls9_A 156 FHAARSSMTLGKSEGGFCDDLFVEPVDRVVQHCLGLIDQYHEPEPFGMVRIALGPCGVPYDKPELFEAFAQMAADYDVRL 235 (456)
T ss_dssp EEEEECCCCCCGGGTCSSCGGGCCCHHHHHHHHHHHHHHHCCCSTTCSEEEEECCCCTTTSCHHHHHHHHHHHHHHTCEE
T ss_pred EEEEccccccccccccCCccccccCHHHHHHHHHHHHHHhhCcCCCCceEEEEecCCCCCCCHHHHHHHHHHHHHCCCCE
Confidence 98877766542 12344444456677888888999998762 357889999999999999999999999999999999
Q ss_pred eEEecCChhhHHHHHHhcCCCCCHHHHHHHhCCCCCCeeEEEeccCCcchhc-----------ccccccccccc
Q 022028 240 HMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEVN-----------CTFGNFKYAVH 302 (304)
Q Consensus 240 ~~H~~E~~~~~~~~~~~~g~~~~~~~~l~~~g~l~~~~~~~H~~~l~~~di~-----------~p~sN~~l~~~ 302 (304)
++|+.|+..+ +.+.+.+|.+ +++++.+.|++++++.+.||+++++++++ ||.||.+++..
T Consensus 236 ~~H~~e~~~~-~~~~~~~~~~--~~~~~~~~g~~~~~~~i~H~~~~~~~~~~~l~~~g~~~~~~p~s~~~l~~~ 306 (456)
T 3ls9_A 236 HTHFYEPLDA-GMSDHLYGMT--PWRFLEKHGWASDRVWLAHAVVPPREEIPEFADAGVAIAHLIAPDLRMGWG 306 (456)
T ss_dssp EEEECCTTHH-HHHHHHHSSC--HHHHHHHTTCSSTTEEEEECCSCCGGGHHHHHHHTCEEEECHHHHHHTTCC
T ss_pred EEEeCCCchH-HHHHHHhCCC--HHHHHHHcCCCCCCcEEEeccCCCHHHHHHHHHcCCEEEEChhHHhhcCCC
Confidence 9999999998 8999999985 99999999999999999999999999987 99999988754
|
| >3v7p_A Amidohydrolase family protein; iron binding site, enzyme functio initiative, EFI; HET: TLA; 1.35A {Nitratiruptor SP} | Back alignment and structure |
|---|
Probab=100.00 E-value=8e-37 Score=279.22 Aligned_cols=265 Identities=19% Similarity=0.256 Sum_probs=212.3
Q ss_pred EEEEccEEEecCCCCceeeeeeEEEeCCEEEEecCChhhhhhhcCCCceEEeCCCCEeeccccccCccchhhhhhcccCC
Q 022028 21 MILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIADD 100 (304)
Q Consensus 21 ~li~~~~ii~~~~~~~~~~~~~I~I~~g~I~~i~~~~~~~~~~~~~~~~vID~~g~iv~PG~ID~H~Hl~~s~~~g~~~~ 100 (304)
++|+|++|+++++ ++++++|+| ||||++|++..+.+..++ +.++||++|++|+|||||+|+|+.++.+||....
T Consensus 2 ~~i~~~~v~~~~~---~~~~~~v~i-~g~I~~Vg~~~~~~~~~~--~~~vid~~g~~v~PGlId~H~H~~~~~~rg~~~~ 75 (427)
T 3v7p_A 2 RIIKPFAILTPQT---IIQDKAVAF-DKKIEAIDTVENLIKKYP--NAAVEHDENSLLLPGFANPHLHLEFSANKATLQY 75 (427)
T ss_dssp EEEEEEEEECSSS---EEESCEEEE-SSBEEEEECHHHHHHHCT--TSEEEEEEEEEEEECEEEEEECGGGTTCSSCSCC
T ss_pred EEEECCEEEcCCC---EEeCcEEEE-CCEEEEecChhhhccccC--CceEEeCCCCEEecCEeecccCcchhhccccccc
Confidence 5799999999873 788999999 999999998765443333 5689999999999999999999999999998888
Q ss_pred CCccccccccccCccCCCChHHHHHHHHHHHHHHHhcCcceeecCCCCCHHHHHHHHHHcCCeEEeecccccCCCCCCCC
Q 022028 101 VDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQHVSEMAKAVELLGLRACLVQSTMDCGEGLPAS 180 (304)
Q Consensus 101 ~~~~~~l~~~~~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~gir~~~~~~~~d~g~~~~~~ 180 (304)
.++.+|+...+++... +++++.+..++.++.+++++||||+.|+.... ...+++.+.|+|.+++...++.. +.
T Consensus 76 ~~l~~wl~~~~~~~~~-~~~~~~~~~~~~~~~e~l~~GvTtv~d~~~~~--~~~~a~~~~Gir~~~~~~~~~~~----~~ 148 (427)
T 3v7p_A 76 GDFIPWLYSVIRHRED-LLPLCDGACLEQTLSSIIQTGTTAIGAISSYG--EDLQACIDSALKVVYFNEVIGSN----AA 148 (427)
T ss_dssp SSHHHHHHHHHHHHHH-HHHHSCHHHHHHHHHHHHHTTEEEEEEEESSS--TTHHHHHHBSSEEEEEEEECBCC----GG
T ss_pred CCHHHHHHHHHHhHHh-cCHHHHHHHHHHHHHHHHHhCCEEEEEecCcH--HHHHHHHhcCCeEEEeccccCCC----hh
Confidence 8999999988776653 55677888889999999999999999986432 23688899999998877665422 11
Q ss_pred cccCChHHHHHHHHHHHHHHcCCCCCCeEEEEeeCcccCCCHHHHHHHHHHHHHhCCeeeEEecCChhhHHHHHHhcCC-
Q 022028 181 WAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKV- 259 (304)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~e~l~~~~~~a~~~~~~~~~H~~E~~~~~~~~~~~~g~- 259 (304)
...+.+++..+.++.+....++.+++.++++++++++++.++.+.++|+++|+++++|++|+..+.+.+++.+|.
T Consensus 149 ----~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~s~e~l~~~~~~A~~~g~~v~~H~~E~~~e~~~~~~~~g~~ 224 (427)
T 3v7p_A 149 ----TADVMYASFLERFHQSKKHENERFKAAVAIHSPYSVHYILAKRALDIAKKYGSLVSVHFMESRAEREWLDKGSGEF 224 (427)
T ss_dssp ----GHHHHHHHHHHHHHHHHTTCBTTEEEEEEECCTTTBCHHHHHHHHHHHHHHTCCEEEEESCSHHHHHHHHHSCSHH
T ss_pred ----hhhHHHHHHHHHHHHhhhccCCceEEEEecCCCCcCCHHHHHHHHHHHHhCCCCEEEEeCCCHHHHHHHHHhcCcc
Confidence 123344445555555555556789999999999999999999999999999999999999999999999887661
Q ss_pred ---------CCCHHHHHHH-hCC-CCCCeeEEEeccCCcchhc-----------ccccccccccc
Q 022028 260 ---------DHGTVTFLDK-IEF-LQNNLLSAHTVWVNHTEVN-----------CTFGNFKYAVH 302 (304)
Q Consensus 260 ---------~~~~~~~l~~-~g~-l~~~~~~~H~~~l~~~di~-----------~p~sN~~l~~~ 302 (304)
..++++.+.+ +++ ++++++++||++++++|++ ||.||.++++.
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~H~~~~~~~~~~~l~~~g~~~~~~p~s~~~~~~~ 289 (427)
T 3v7p_A 225 AKFFKEFLNQTRPVNDTKSFLELFKELHTLFVHMVWANEEEIQTIASYNAHIIHCPISNRLLGNG 289 (427)
T ss_dssp HHHHHHHTCCCSCSSCHHHHHHTTTTSEEEEEECTTCCHHHHHHHHHSEEEEEECHHHHHHTTCC
T ss_pred hhhhhhhccCCCcccCHHHHHhhhcCCCEEEEECCCCCHHHHHHHHHcCCEEEECHHHHHHhcCC
Confidence 1123333333 455 7899999999999999987 99999988764
|
| >4f0l_A Amidohydrolase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 2.05A {Brucella melitensis biovar abortus} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-36 Score=278.24 Aligned_cols=266 Identities=15% Similarity=0.143 Sum_probs=214.3
Q ss_pred CCcccEEEEccEEEecCCCCceeeeeeEEEeCCEEEEecCChhhhhhhcCCCceEEeCCCCEeeccccccCccchhhhhh
Q 022028 16 GSSSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAK 95 (304)
Q Consensus 16 ~~~~~~li~~~~ii~~~~~~~~~~~~~I~I~~g~I~~i~~~~~~~~~~~~~~~~vID~~g~iv~PG~ID~H~Hl~~s~~~ 95 (304)
++|..++++|+.+. + ..+++++|+|+||||++|++..+ .++||++|++|+|||||+|+|+.++.+|
T Consensus 9 ~~m~~l~~~~~~~~--~---~~~~~~~v~I~~g~I~~Ig~~~~---------~~~iD~~g~~v~PGlID~H~H~~~~~~r 74 (458)
T 4f0l_A 9 SSQHFIHARQALLP--D---GWAENVRIGIAGGVICSIETGVL---------AGPDDERQSVVVAGMANLHSHAFQYGMA 74 (458)
T ss_dssp --CEEEEEEEEEET--T---EEEEEEEEEEETTEEEEEECSCC---------CCTTCEEEEEEEECEEEEEECGGGGGGT
T ss_pred cchhHhhhcceecc--C---ccccCceEEEECCEEEEEeCCCc---------cccccCCCCEEccCceecccchhhhhhc
Confidence 34556777887663 2 46789999999999999998642 2468999999999999999999999999
Q ss_pred cccC-----CCCccccccccccCccCCCChHHHHHHHHHHHHHHHhcCcceeecCCCC--------------CHHHHHHH
Q 022028 96 GIAD-----DVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQ--------------HVSEMAKA 156 (304)
Q Consensus 96 g~~~-----~~~~~~~l~~~~~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~d~~~~--------------~~~~~~~~ 156 (304)
|... +.++.+|+. .+|+....+++++.+..++.++.+++++||||+.|+... ..+...++
T Consensus 75 g~~~~~~~~~~~~~~w~~-~~~~~~~~~~~e~~~~~~~~~~~e~l~~GvTtv~d~~~~~~~~~g~~~~~~~~~~~~~~~a 153 (458)
T 4f0l_A 75 GLAERRGPSADSFWSWRE-IMYKFALTMTPEQAEAVALRLYVDMLEAGFTRVGEFHYLHHDCDGTPYANLSEMADRIAAA 153 (458)
T ss_dssp TSSCBCCSCSSTTHHHHH-HHHHHHHHCCHHHHHHHHHHHHHHHHHTTEEEEEEEECCCSCTTSCCCSSTTHHHHHHHHH
T ss_pred ccccccccCCCcHHHHHH-HhhhhhhhCCHHHHHHHHHHHHHHHHhcCCcEEEeeeeeccccccccccchhhhHHHHHHH
Confidence 8765 678889975 467777779999999999999999999999999985321 14577889
Q ss_pred HHHcCCeEEeecccccCCC--CCCCC----cccCChHHHHHHHHHHHHHHcCCCCCCeEEEEeeCcccCCCHHHHHHHHH
Q 022028 157 VELLGLRACLVQSTMDCGE--GLPAS----WAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRD 230 (304)
Q Consensus 157 ~~~~gir~~~~~~~~d~g~--~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~e~l~~~~~ 230 (304)
+.+.|+|.+++..+++.+. +.++. ......++.++..+++.+.+.. .+.+.++++++++++++++.++.+.+
T Consensus 154 ~~~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~l~~~~~ 231 (458)
T 4f0l_A 154 ATTAGMGLTLLPVFYAHSGFGGAAANEGQRRFINDPERFARLIEGCRKTLEG--FEGAVLGVAPHSLRAVTPDELDSVTQ 231 (458)
T ss_dssp HHHHTCEEEEEEEECCEEETTTEECCGGGTTTCCCHHHHHHHHHHHHHHHTT--CTTCEECBEECBTTTSCHHHHHHHTT
T ss_pred HHHcCCeEEEecchhccccccccCCchhhhhhhcCHHHHHHHHHHHHHHhcc--CCceEEEEecCCcCcCCHHHHHHHHH
Confidence 9999999988766654221 01111 1123445555555566665543 35778889999999999999999999
Q ss_pred HHHHhCCeeeEEecCChhhHHHHHHhcCCCCCHHHHHHHhCCCCCCeeEEEeccCCcchhc-----------cccccccc
Q 022028 231 MAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEVN-----------CTFGNFKY 299 (304)
Q Consensus 231 ~a~~~~~~~~~H~~E~~~~~~~~~~~~g~~~~~~~~l~~~g~l~~~~~~~H~~~l~~~di~-----------~p~sN~~l 299 (304)
+|+ ++++++|++|+..+.+.+.+.+|.+ +++++.+.|+++++++++||++++++|++ ||.||.++
T Consensus 232 ~a~--g~~v~~H~~e~~~~~~~~~~~~g~~--~~~~l~~~g~l~~~~~~~H~~~~~~~~~~~l~~~g~~~~~~p~s~~~l 307 (458)
T 4f0l_A 232 LLP--DAPVHIHVAEQVKEVEDCIAWSGKR--PVEWLLDHQDVTARWCLIHATHMSDEETKHMAKAGAIAGLCPVTEANL 307 (458)
T ss_dssp SST--TSCEEEEESCSHHHHHHHHHHHSSC--HHHHHHHHSCCCTTEEEEECCSCCHHHHHHHHHHTCEEEECHHHHHHT
T ss_pred Hhc--CCCEEEEeCCCHHHHHHHHHHhCCC--HHHHHHHcCCCCCCeEEEEeccCCHHHHHHHHHcCCeEEECccccccc
Confidence 998 9999999999999999999999985 99999999999999999999999999987 99999998
Q ss_pred ccc
Q 022028 300 AVH 302 (304)
Q Consensus 300 ~~~ 302 (304)
++.
T Consensus 308 ~~~ 310 (458)
T 4f0l_A 308 GDG 310 (458)
T ss_dssp TCC
T ss_pred cCC
Confidence 764
|
| >3mdu_A N-formimino-L-glutamate iminohydrolase; amonohydralase family, N-formimino-L-glutamate iminohydrolas guanidino-L-glutamate; HET: NGQ; 1.40A {Pseudomonas aeruginosa} PDB: 3mdw_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-35 Score=273.21 Aligned_cols=261 Identities=18% Similarity=0.215 Sum_probs=212.0
Q ss_pred EEccEEEecCCCCceeeeeeEEE-eCCEEEEecCChhhhhhhcCCCceEEeCCCCEeeccccccCccchhhhhhcccC--
Q 022028 23 LHNAVIVTMDKESRVFRNGGVFV-VQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIAD-- 99 (304)
Q Consensus 23 i~~~~ii~~~~~~~~~~~~~I~I-~~g~I~~i~~~~~~~~~~~~~~~~vID~~g~iv~PG~ID~H~Hl~~s~~~g~~~-- 99 (304)
+...+++..+ .++++++|.| +||+|++|++..++ .+++|++| +|+|||||+|+|+.++.+||...
T Consensus 4 ~~~~~~~~~~---~~~~~~~v~i~~~g~I~~ig~~~~~--------~~~~d~~g-~v~PGfId~H~H~~~~~~rg~~~~~ 71 (453)
T 3mdu_A 4 IFAERALLPE---GWARNVRFEISADGVLAEIRPDANA--------DGAERLGG-AVLPGMPNLHSHAFQRAMAGLAEVA 71 (453)
T ss_dssp EEEEEEEETT---EEEEEEEEEECTTSBEEEEESSCCC--------TTSEECSS-CEEECEEEEEECGGGGGGTTTTCCC
T ss_pred cchhheecCC---ceecCeEEEEecCCEEEEecCCCCc--------ccccccCC-cccccceecccchHHHhhccccccc
Confidence 3455566544 4788999999 89999999987531 23579999 99999999999999999999764
Q ss_pred ---CCCccccccccccCccCCCChHHHHHHHHHHHHHHHhcCcceeecCCCCC--------------HHHHHHHHHHcCC
Q 022028 100 ---DVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQH--------------VSEMAKAVELLGL 162 (304)
Q Consensus 100 ---~~~~~~~l~~~~~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~d~~~~~--------------~~~~~~~~~~~gi 162 (304)
+.+|.+|+. .+|+....+++++++..++.++.+++++||||+.++...+ .+.+++++++.|+
T Consensus 72 ~~~~~~l~~wl~-~~~~~~~~~~~e~~~~~a~~~~~e~l~~GvTtv~d~~~~~~~~~g~~~~~~~~~~~~~~~a~~~~Gi 150 (453)
T 3mdu_A 72 GNPNDSFWTWRE-LMYRMVARLSPEQIEVIACQLYIEMLKAGYTAVAEFHYVHHDLDGRSYADPAELSLRISRAASAAGI 150 (453)
T ss_dssp SSTTCCHHHHHH-HHHHHHTTCCHHHHHHHHHHHHHHHHHHTEEEEEEEECCCSCTTSCCCSSTTHHHHHHHHHHHHHTC
T ss_pred cCCCCcHHHHHH-HHhhhhhhCCHHHHHHHHHHHHHHHHHcCCcEEEEeeEeccccccccccchhhHHHHHHHHHHHhCC
Confidence 467899975 4678888899999999999999999999999999853211 3577889999999
Q ss_pred eEEeecccccCCC-C-CCCCc----ccCChHHHHHHHHHHHHHHcCCCCCCeEEEEeeCcccCCCHHHHHHHHHHHHHhC
Q 022028 163 RACLVQSTMDCGE-G-LPASW----AVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFK 236 (304)
Q Consensus 163 r~~~~~~~~d~g~-~-~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~e~l~~~~~~a~~~~ 236 (304)
|.+++..+++.+. + .++.. .....+..++..+++.+.+... +. .+.++|+++++++++.+++++++|+ +|
T Consensus 151 r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~-~~~~~p~~~~~~~~e~l~~~~~~A~-~g 226 (453)
T 3mdu_A 151 GLTLLPVLYSHAGFGGQPASEGQRRFINGSEAYLELLQRLRAPLEAA--GH-SLGLCFHSLRAVTPQQIATVLAAGH-DD 226 (453)
T ss_dssp EEEEEECBCCBSSTTTCBCCGGGGGGCCCHHHHHHHHHHHHHHHHHH--TC-EECEEEEETTTSCHHHHHHHHTSSC-TT
T ss_pred eEEEecchhccccccCCCCchhhhhccCCHHHHHHHHHHHHHHhhcC--CC-eEEEecCCCCcCCHHHHHHHHHHHh-cC
Confidence 9998876665421 1 12221 1234556666566666555432 34 7788999999999999999999999 99
Q ss_pred CeeeEEecCChhhHHHHHHhcCCCCCHHHHHHHhCCCCCCeeEEEeccCCcchhc-----------ccccccccccc
Q 022028 237 TGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEVN-----------CTFGNFKYAVH 302 (304)
Q Consensus 237 ~~~~~H~~E~~~~~~~~~~~~g~~~~~~~~l~~~g~l~~~~~~~H~~~l~~~di~-----------~p~sN~~l~~~ 302 (304)
+++++|++|+..+.+.+.+.+|.+ +++++.+.|+++++++++||++++++|++ ||.||.++++.
T Consensus 227 ~~v~~H~~e~~~e~~~~~~~~g~~--~v~~l~~~g~~~~~~~~~H~~~~~~~~i~~la~~g~~v~~~P~sn~~lg~g 301 (453)
T 3mdu_A 227 LPVHIHIAEQQKEVDDCQAWSGRR--PLQWLYENVAVDQRWCLVHATHADPAEVAAMARSGAVAGLCLSTEANLGDG 301 (453)
T ss_dssp SCEEEEESCSHHHHHHHHHHHSSC--HHHHHHHHSCCCTTEEEEECCSCCHHHHHHHHHHTCEEEECHHHHHHTTCC
T ss_pred CCEEEEeCCCHHHHHHHHHHhCCC--HHHHHHHcCCCCCCeEEEEcCCCCHHHHHHHHHcCCEEEECchhHhhcCCC
Confidence 999999999999999999999985 99999999999999999999999999987 99999998864
|
| >2i9u_A Cytosine/guanine deaminase related protein; protein structure initiative II (PSI-II), amidohydrol guanine deaminase; HET: GUN; 2.05A {Clostridium acetobutylicum} SCOP: b.92.1.4 c.1.9.9 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-33 Score=257.04 Aligned_cols=276 Identities=20% Similarity=0.292 Sum_probs=213.3
Q ss_pred cccEEEEccEEEecCC-CCceeeeeeEEEeCCEEEEecCChhhhhhhcCCCceEEeCCCCEeeccccccCccchhhhhhc
Q 022028 18 SSTMILHNAVIVTMDK-ESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKG 96 (304)
Q Consensus 18 ~~~~li~~~~ii~~~~-~~~~~~~~~I~I~~g~I~~i~~~~~~~~~~~~~~~~vID~~g~iv~PG~ID~H~Hl~~s~~~g 96 (304)
|.+++|+|++|++++. ..+++.+++|+|+||||++|++..+. +..+.++||++|++|+|||||+|+|+..+.++|
T Consensus 8 m~~~li~~~~v~~~~~~~~~~~~~~~v~I~~g~I~~ig~~~~~----~~~~~~viD~~G~~v~PGlID~H~H~~~~~~~g 83 (439)
T 2i9u_A 8 INLKIFKGNLIFTKTSDKFTIMKDSYIVVIDGKIASVSSNLPD----KYKGNPIIDFRNNIIIPGMNDLHAHASQYKNLG 83 (439)
T ss_dssp -CEEEEEEEEEEEEETTEEEEEEEEEEEEETTEEEEEESSCCG----GGTTSCEEEEEEEEEEECEEEEEEEGGGGGGTT
T ss_pred cccEEEEeeEEEecCCccceEEeccEEEEECCEEEEecccccc----cCCCceEEcCCCeEEEecceecccccchHhhhC
Confidence 4568999999999762 23466889999999999999864321 112457999999999999999999999888877
Q ss_pred ccCCCCccccccccccCccCCC-ChHHHHHHHHHHHHHHHhcCcceeecCCCCC---HHHHHHHHHHcCCeEEeeccccc
Q 022028 97 IADDVDLMTWLHDRIWPYESNM-TEEDSYISTLLCGIELIHSGVTCFAEAGGQH---VSEMAKAVELLGLRACLVQSTMD 172 (304)
Q Consensus 97 ~~~~~~~~~~l~~~~~~~~~~~-~~e~~~~~~~~~~~~~l~~GvTtv~d~~~~~---~~~~~~~~~~~gir~~~~~~~~d 172 (304)
...+.++.+|+....|+.+..+ ++++++..+..++.+++++||||++++.... ....++++.+.|+|.+.+..+++
T Consensus 84 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~GvTtv~~~~~~~~~~~~~~~~~~~~~g~r~~~~~~~~~ 163 (439)
T 2i9u_A 84 IGMDKELLPWLNNYTFPEEAKFLNVDYAKKTYGRLIKDLIKNGTTRVALFATLHKDSTIELFNMLIKSGIGAYVGKVNMD 163 (439)
T ss_dssp CCCSSCHHHHHHHTHHHHHHGGGSHHHHHHHHHHHHHHHHHTTEEEEEEECCSCHHHHHHHHHHHHHHTCEEEEECEECC
T ss_pred CcCCCCHHHHHHhcccchhhccCCHHHHHHHHHHHHHHHHhcCceEEEEccccccchHHHHHHHHHHcCCEEEEEeeecc
Confidence 6666788888876555544333 6777888888889999999999999976433 24567778889999877655544
Q ss_pred CCCCCCCCcccCChHHHHHHHHHHHHHHcCCCCCCeEEEEeeCcccCCCHHHHHHHHHHHHHhCCeeeEEecCChhhHHH
Q 022028 173 CGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQV 252 (304)
Q Consensus 173 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~e~l~~~~~~a~~~~~~~~~H~~E~~~~~~~ 252 (304)
.. .+..+ .......++...++++.+... .+.+++.++++.+..++++.++++++.|+++|+++.+|+.|+..+.+.
T Consensus 164 ~~--~p~~~-~~~~~~~~~~~~~~~~~~~~~-~~~i~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~ 239 (439)
T 2i9u_A 164 YN--CPDYL-TENYITSLNDTEEIILKYKDK-SNIVKPIITPRFVPSCSNELMDGLGKLSYKYRLPVQSHLSENLDEIAV 239 (439)
T ss_dssp SS--CCTTS-CCCHHHHHHHHHHHHHHHTTT-CSSEEECBEECCGGGCCHHHHHHHHHHHHHHTCCEEEEESCCHHHHHH
T ss_pred cc--CCccc-chhHHHHHHHHHHHHHHHhCC-CCceEEEEecCCcCcCCHHHHHHHHHHHHhcCCcEEEeecCChHHHHH
Confidence 21 11111 112334556677777777542 467777788887778899999999999999999999999999988999
Q ss_pred HHHhcCCCCCHHHHHHHhCCCC-CCeeEEEeccCCcchhc-----------cccccccccc
Q 022028 253 VMDTRKVDHGTVTFLDKIEFLQ-NNLLSAHTVWVNHTEVN-----------CTFGNFKYAV 301 (304)
Q Consensus 253 ~~~~~g~~~~~~~~l~~~g~l~-~~~~~~H~~~l~~~di~-----------~p~sN~~l~~ 301 (304)
+.+.+|....+++.+.+.|+++ +++++.||+++++++++ ||.+|..++.
T Consensus 240 ~~~~~~~~~~~~~~~~~~g~~~~~~~~i~H~~~~~~~~~~~l~~~g~~~~~~p~~~~~l~~ 300 (439)
T 2i9u_A 240 VKSLHKKSNFYGEVYDKFGLFGNTPTLMAHCIHSSKEEINLIKRNNVTIVHCPTSNFNLGS 300 (439)
T ss_dssp HHHHCTTCSSHHHHHHHTTCSSSSCEEEEECCSCCHHHHHHHHHTTCEEEECHHHHHHTTC
T ss_pred HHHHhCCCCCHHHHHHHcCCCCCCCeEEEEEecCCHHHHHHHHHcCCEEEECccchhhccc
Confidence 8888887445899999999998 99999999999998876 8888877754
|
| >2paj_A Putative cytosine/guanine deaminase; NYSGXRC, PSI-II, amidohydrolase, sargasso SEA, enviro sample, structural genomics; 2.70A {Unidentified} SCOP: b.92.1.4 c.1.9.9 | Back alignment and structure |
|---|
Probab=100.00 E-value=9.3e-33 Score=256.65 Aligned_cols=274 Identities=24% Similarity=0.331 Sum_probs=192.9
Q ss_pred ccEEEEccE-EEecCCCCc-----eeeeeeEEEeCCEEEEecCChhhhhhhcCCCceEEeCCCCEeeccccccCccchhh
Q 022028 19 STMILHNAV-IVTMDKESR-----VFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQ 92 (304)
Q Consensus 19 ~~~li~~~~-ii~~~~~~~-----~~~~~~I~I~~g~I~~i~~~~~~~~~~~~~~~~vID~~g~iv~PG~ID~H~Hl~~s 92 (304)
.+++|+|++ |++++ ... .+.+++|+|+||||++|++..+ + .+.++||++|++|+|||||+|+|+..+
T Consensus 10 ~~~li~n~~~i~~~~-~~~~~~~~~~~~~~v~I~~g~I~~vg~~~~-----~-~~~~viD~~G~~v~PG~ID~H~H~~~~ 82 (492)
T 2paj_A 10 PSTLIRNAAAIMTGG-RGTADDPSRVPGPDIRIVGDTIDAIGALAP-----R-PGETIVDATDCVIYPAWVNTHHHLFQS 82 (492)
T ss_dssp CEEEEECBSEEBCCC-CSSSSSCSBCCCCCEEEETTEEEEESSCCC-----C-TTCEEEECBTCEEEECEECCCCCGGGG
T ss_pred CCeEEECCEEEEecC-CccccccceecccEEEEECCEEEEEcCCCC-----C-CCCeEEECCCcEEeeCccccccChhhH
Confidence 357899999 99976 220 3468899999999999997642 1 246899999999999999999999887
Q ss_pred hhhccc--CCCCccccccccccCccCCCChHHHHHHHHHHHHHHHhcCcceeecCCC-C-------CHHHHHHHHHHcCC
Q 022028 93 LAKGIA--DDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGG-Q-------HVSEMAKAVELLGL 162 (304)
Q Consensus 93 ~~~g~~--~~~~~~~~l~~~~~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~d~~~-~-------~~~~~~~~~~~~gi 162 (304)
..++.. .+.++.+|+....|+....+++++++..++.++.+++++||||++++.. . ..+...++.++.|+
T Consensus 83 ~~~g~~~~~~~~~~~~l~~~~~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~g~ 162 (492)
T 2paj_A 83 LLKGEPAGLDATLTPWLAATPYRFRALFDERRFRLAARIGLIELARSGCATVADHNYVYYPGMPFDSSAILFEEAEKLGL 162 (492)
T ss_dssp GCCSCC-----------------CGGGCCHHHHHHHHHHHHHHHHTTTEEEEEECCCCCCTTCSSCHHHHHHHHHHHTTC
T ss_pred hhcCccCCCCCCHHHHHHhcccchhhcCCHHHHHHHHHHHHHHHHhcCcEEEEechhhcccccccchHHHHHHHHHHcCC
Confidence 766654 4567788988877888888899999999999999999999999999753 1 13556777788999
Q ss_pred eEEeecccccCCC----CCCCCcccCChHHHHHHHHHHHHHHcCCCC-CCeEEEEeeCcc-cCCCHHHHHHHHHHHHHhC
Q 022028 163 RACLVQSTMDCGE----GLPASWAVRTTDDCIQSQKELYAKHHHAAD-GRIRIWFGIRQI-MNATDRLLLETRDMAREFK 236 (304)
Q Consensus 163 r~~~~~~~~d~g~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~i~~~~~~~~~-~~~~~e~l~~~~~~a~~~~ 236 (304)
|.++.....+.+. +..+........+.++...++++.+....+ +.+++.++++.. ..++++.++++++.|+++|
T Consensus 163 r~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~g 242 (492)
T 2paj_A 163 RFVLLRGGATQTRQLEADLPTALRPETLDAYVADIERLAARYHDASPRAMRRVVMAPTTVLYSISPREMRETAAVARRLG 242 (492)
T ss_dssp EEEEEECCCSCCCSCSTTSCGGGCCCCHHHHHHHHHHHHHHTCCCSTTCSEEEEECCTTTTTSSCHHHHHHHHHHHHHTT
T ss_pred EEEEEchhhcccccccccCCccccccCHHHHHHHHHHHHHHhccCCCCCceEEEEecccCCCCCCHHHHHHHHHHHHHcC
Confidence 9987665543221 111111122234556667777777654333 568888888887 7899999999999999999
Q ss_pred CeeeEEecCChhhHHHHHHhcCCCCCHHHHHHHhCCCCCCeeEEEeccCCcchhc-----------cccccccccc
Q 022028 237 TGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEVN-----------CTFGNFKYAV 301 (304)
Q Consensus 237 ~~~~~H~~E~~~~~~~~~~~~g~~~~~~~~l~~~g~l~~~~~~~H~~~l~~~di~-----------~p~sN~~l~~ 301 (304)
+++.+|+.++..+.+.+.+.+|.+ +++++.+.|+++++.++.||+++++++++ ||.+|.+++.
T Consensus 243 ~~v~~H~~~~~~~~~~~~~~~g~~--~~~~~~~~g~~~~~~~i~H~~~~~~~~i~~l~~~gv~v~~~p~~~~~l~~ 316 (492)
T 2paj_A 243 LRMHSHLSETVGYQDSAYSMYGKS--PVAFCGEHDWLGSDVWYAHLVKVDADEIALLAQTGTGVAHCPQSNGRLGS 316 (492)
T ss_dssp CEEEEECC-------------CCC--HHHHHHHTTCCSTTEEEESCCSCCHHHHHHHHHHTCEEEECHHHHHCC--
T ss_pred CcEEEEeCCChHHHHHHHHHcCCC--HHHHHHHCCCCCCCcEEEEEecCCHHHHHHHHHcCCEEEECchhhcccCC
Confidence 999999999888888888888874 99999999999999999999999999887 8999888763
|
| >2ood_A BLR3880 protein; PSI-II, PSI-2, guanine deaminase, guanine, structural genomics, protein structure initiative; HET: GUN; 2.62A {Bradyrhizobium japonicum} SCOP: b.92.1.4 c.1.9.9 | Back alignment and structure |
|---|
Probab=100.00 E-value=4.1e-33 Score=258.06 Aligned_cols=275 Identities=19% Similarity=0.284 Sum_probs=215.8
Q ss_pred ccEEEEccEEEecCCC-----------CceeeeeeEEEeCCEEEEecCChhhhhhhcCCCceEEeCCCCEeeccccccCc
Q 022028 19 STMILHNAVIVTMDKE-----------SRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHV 87 (304)
Q Consensus 19 ~~~li~~~~ii~~~~~-----------~~~~~~~~I~I~~g~I~~i~~~~~~~~~~~~~~~~vID~~g~iv~PG~ID~H~ 87 (304)
..++|.+++|+++... .+++++++|+|+||||++|++..+.+..+ .+.++||++|++|+|||||+|+
T Consensus 3 ~~~~~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~V~I~~G~I~~Vg~~~~~~~~~--~~~~viD~~G~~v~PG~ID~H~ 80 (475)
T 2ood_A 3 LTTVGIRGTFFDFVDDPWKHIGNEQAAARFHQDGLMVVTDGVIKAFGPYEKIAAAH--PGVEITHIKDRIIVPGFIDGHI 80 (475)
T ss_dssp CCEEEEEEEEEEESSCGGGSTTCGGGGEEEEEEEEEEEESSBEEEEEEHHHHHHHS--TTCEEEEEEEEEEEECEEEEEE
T ss_pred ccceEEEEEEEecCCccccccccCCCcceEEECCEEEEECCEEEEEeChhhhcccc--CCCeEEeCCCcEEecceecCcc
Confidence 4456889999987641 34678999999999999999764432111 2468999999999999999999
Q ss_pred cchhhhhhcccCCCCccccccccccCccCCC-ChHHHHHHHHHHHHHHHhcCcceeecCCCCC---HHHHHHHHHHcCCe
Q 022028 88 HTSQQLAKGIADDVDLMTWLHDRIWPYESNM-TEEDSYISTLLCGIELIHSGVTCFAEAGGQH---VSEMAKAVELLGLR 163 (304)
Q Consensus 88 Hl~~s~~~g~~~~~~~~~~l~~~~~~~~~~~-~~e~~~~~~~~~~~~~l~~GvTtv~d~~~~~---~~~~~~~~~~~gir 163 (304)
|+.++.++|.. +.++.+|+....|+.+..+ ++++++..+..++.+++++||||++++.... .+.+.+++++.|+|
T Consensus 81 Hl~~~~~~g~~-~~~~~~~l~~~~~~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~~~~~~~~~~~~~~~~~~~~~g~r 159 (475)
T 2ood_A 81 HLPQTRVLGAY-GEQLLPWLQKSIYPEEIKYKDRNYAREGVKRFLDALLAAGTTTCQAFTSSSPVATEELFEEASRRNMR 159 (475)
T ss_dssp EGGGTTCTTCC-SCCHHHHHHHHTHHHHGGGGSHHHHHHHHHHHHHHHHHTTEEEEEEECCSSHHHHHHHHHHHHHHTCC
T ss_pred cHHhHhhcCCC-CCCHHHHHHHhccchhhccCCHHHHHHHHHHHHHHHHhcCceEEEEecccCchhHHHHHHHHHHcCCe
Confidence 99988777654 4467788877666554443 5788888888999999999999999975433 34567788889999
Q ss_pred EEeecccccCCCCCCCCcccCChHHHHHHHHHHHHHHcCCCCCCeEEEEeeCcccCCCHHHHHHHHHHHHHh-CCeeeEE
Q 022028 164 ACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREF-KTGIHMH 242 (304)
Q Consensus 164 ~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~e~l~~~~~~a~~~-~~~~~~H 242 (304)
.+++..+.+.+ . +.......++.+++..++++.+.. .+.++..++++..++++++.++++.++|+++ |+++++|
T Consensus 160 ~~~g~~~~~~~--~-~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~e~l~~~~~~a~~~~g~~v~~H 234 (475)
T 2ood_A 160 VIAGLTGIDRN--A-PAEFIDTPENFYRDSKRLIAQYHD--KGRNLYAITPRFAFGASPELLKACQRLKHEHPDCWVNTH 234 (475)
T ss_dssp EEECCEECCSS--S-CTTTCCCHHHHHHHHHHHHHHHTT--BTTEEEEEEECBGGGCCHHHHHHHHHHHHHCTTSEEEEE
T ss_pred EEEEeeecccC--C-CcccccCHHHHHHHHHHHHHHhcc--CCceEEEEeccccCcCCHHHHHHHHHHHHhCCCCcEEEe
Confidence 87665554422 1 111223345667777888887754 3578888899988899999999999999999 9999999
Q ss_pred ecCChhhHHHHHHhcCCCCCHHHHHHHhCCCCCCeeEEEeccCCcchhc-----------cccccccccc
Q 022028 243 VAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEVN-----------CTFGNFKYAV 301 (304)
Q Consensus 243 ~~E~~~~~~~~~~~~g~~~~~~~~l~~~g~l~~~~~~~H~~~l~~~di~-----------~p~sN~~l~~ 301 (304)
+.|+..+.+.+.+.+|....+++.+++.|+++.++++.||+++++++++ ||.+|.+++.
T Consensus 235 ~~e~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~i~H~~~~~~~~i~~~~~~g~~~~~~P~~~~~l~~ 304 (475)
T 2ood_A 235 ISENPAECSGVLVEHPDCQDYLGVYEKFDLVGPKFSGGHGVYLSNNEFRRMSKKGAAVVFCPCSNLFLGS 304 (475)
T ss_dssp CSCCHHHHHHHHHHCTTCSSHHHHHHTTTCCSTTEEEECCTTCCHHHHHHHHHHTCEEEECHHHHHHTTC
T ss_pred eCCChHHHHHHHHHcCCCccHHHHHHHcCCCCCCcEEEEeecCCHHHHHHHHHcCCEEEEChhhhhhccc
Confidence 9999988999998887544589999999999999999999999998886 8988887664
|
| >2imr_A Hypothetical protein DR_0824; zinc, NYSGXRC, PSI2, structural genomics, protein structure initiative; 1.78A {Deinococcus radiodurans} SCOP: b.92.1.11 c.1.9.16 | Back alignment and structure |
|---|
Probab=99.98 E-value=1.3e-31 Score=244.26 Aligned_cols=276 Identities=17% Similarity=0.175 Sum_probs=193.4
Q ss_pred CCCCCCCCCC-CCcccEEEEccEEEecCCCCceeeeeeEEEeCCEEEEecCChhhhhhhcCCCceEEeCCCCEeeccccc
Q 022028 6 SGGGSSSGSL-GSSSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVN 84 (304)
Q Consensus 6 ~~~~~~~~~~-~~~~~~li~~~~ii~~~~~~~~~~~~~I~I~~g~I~~i~~~~~~~~~~~~~~~~vID~~g~iv~PG~ID 84 (304)
+|++.+.++. ..|.+++|+|++|++++. ..+.+++|+|+||||++|++..+.+..+ .+.++||++ ++|+|||||
T Consensus 23 ~~~~~~~~~~~~~~~~~li~n~~v~~~~~--~~~~~~~V~I~~g~I~~vg~~~~~~~~~--~~~~viD~~-~~v~PGlID 97 (420)
T 2imr_A 23 SEATTPDALTPDAHTPRLLTCDVLYTGMG--GAQSPGGVVVVGETVAAAGHPDELRRQY--PHAAEERAG-AVIAPPPVN 97 (420)
T ss_dssp -------------CCEEEEEESEEECC-----EESSEEEEEETTEEEEEECHHHHHHHC--TTCEEEECC-SEESSCCCE
T ss_pred cccccccccCCcccccEEEECCEEEeCCC--CeeeccEEEEECCEEEEecCcccccccC--CCCeeecCC-eEECCCCEe
Confidence 3444444443 235568999999998763 3567899999999999999764321111 246899999 999999999
Q ss_pred cCccchhhhhhcccCCCCccccccccccCccCCCChHHHHHHHHHHHHHHHhcCcceeecCCCCCHHHHHHHHHHcCCeE
Q 022028 85 THVHTSQQLAKGIADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQHVSEMAKAVELLGLRA 164 (304)
Q Consensus 85 ~H~Hl~~s~~~g~~~~~~~~~~l~~~~~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~gir~ 164 (304)
+|+|+..+.++|.. .++.+|+....++....+++ ..++.++.+++++||||++|+.. ....+.+++.+.|+|.
T Consensus 98 ~H~H~~~~~~~g~~--~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~l~~GvTtv~d~~~-~~~~~~~~~~~~g~r~ 170 (420)
T 2imr_A 98 AHTHLDMSAYEFQA--LPYFQWIPEVVIRGRHLRGV----AAAQAGADTLTRLGAGGVGDIVW-APEVMDALLAREDLSG 170 (420)
T ss_dssp EEEESSCCHHHHHH--CHHHHTSHHHHHHHTTCCHH----HHHHHHHHHHHHTTCCCEEEEEC-SHHHHHHHHTCTTCCE
T ss_pred cCcCcchhhhhhcc--CCHHHHHHHhhhhhhhccCH----HHHHHHHHHHHhcCcEEEEEccC-CHHHHHHHHHhcCcEE
Confidence 99999887666543 44567765433322212222 44566788899999999999863 2333322466778888
Q ss_pred EeecccccCCCCCCCCcccCChHHHHHHHHHHHHHHcCCCCCCeEEEEeeCcccCCCHHHHHHHHHHHHHhCCeeeEEec
Q 022028 165 CLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVA 244 (304)
Q Consensus 165 ~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~e~l~~~~~~a~~~~~~~~~H~~ 244 (304)
+++..+.+. ++.. ..+.+++..++++.+.....+.+++.++++..+.++++.++++++.|+++|+++++|+.
T Consensus 171 ~~~~~~~~~----~~~~----~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~ 242 (420)
T 2imr_A 171 TLYFEVLNP----FPDK----ADEVFAAARTHLERWRRLERPGLRLGLSPHTPFTVSHRLMRLLSDYAAGEGLPLQIHVA 242 (420)
T ss_dssp EEEEEECBC----CGGG----HHHHHHHHHHHHHHHHTTCBTTEEEEEEECCSSSBCHHHHHHHHHHHHHHTCCBEEEES
T ss_pred EEEeeecCC----Cchh----hHHHHHHHHHHHHHHhcccCCceEEEecCCcCCCcCHHHHHHHHHHHHHCCCcEEEEeC
Confidence 776554431 1211 22344566677777766555778888999888888999999999999999999999999
Q ss_pred CChhhHHHHHHhcCC------------------------CCCHHHHHHHhCCCCCCeeEEEeccCCcchhc---------
Q 022028 245 EIPYENQVVMDTRKV------------------------DHGTVTFLDKIEFLQNNLLSAHTVWVNHTEVN--------- 291 (304)
Q Consensus 245 E~~~~~~~~~~~~g~------------------------~~~~~~~l~~~g~l~~~~~~~H~~~l~~~di~--------- 291 (304)
|+..+.+.+.+.+|. ..++++++.+.|+++++.++.||+++++++++
T Consensus 243 e~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~i~H~~~l~~~~i~~l~~~g~~~ 322 (420)
T 2imr_A 243 EHPTELEMFRTGGGPLWDNRMPALYPHTLAEVIGREPGPDLTPVRYLDELGVLAARPTLVHMVNVTPDDIARVARAGCAV 322 (420)
T ss_dssp CSHHHHHHHHHSCSTTGGGSCGGGSCSSHHHHHTSCCCTTCCHHHHHHHHTCGGGCCEEEECCSCCHHHHHHHHHHTCCE
T ss_pred CCHHHHHHHHHhhccccccccccchhhhhhhhccccccCCCCHHHHHHHcCCCCCCeEEEecCcCCHHHHHHHHHcCCeE
Confidence 998888888776531 12488999999999999999999999998876
Q ss_pred --cccccccccc
Q 022028 292 --CTFGNFKYAV 301 (304)
Q Consensus 292 --~p~sN~~l~~ 301 (304)
||.+|..++.
T Consensus 323 ~~~p~~~~~~~~ 334 (420)
T 2imr_A 323 VTCPRSNHHLEC 334 (420)
T ss_dssp EECHHHHHHTTC
T ss_pred EECHHHHHHhcc
Confidence 7888877653
|
| >3hpa_A Amidohydrolase; signature of Zn ligands, structural genomics, NYSGXRC, target 9236E, PSI-2, protein structure initiative; 2.20A {Unidentified} | Back alignment and structure |
|---|
Probab=99.97 E-value=8.1e-30 Score=234.68 Aligned_cols=277 Identities=25% Similarity=0.465 Sum_probs=205.7
Q ss_pred cccEEEEccEE-EecCCCCceeeeeeEEEeCCEEEEecCChhhhhhhcCCCceEEeCCCCEeeccccccCccchhhhhhc
Q 022028 18 SSTMILHNAVI-VTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKG 96 (304)
Q Consensus 18 ~~~~li~~~~i-i~~~~~~~~~~~~~I~I~~g~I~~i~~~~~~~~~~~~~~~~vID~~g~iv~PG~ID~H~Hl~~s~~~g 96 (304)
..+++|+|++| +|+|+..+++++++|+|+||||++|++..+. +..+.++||++|++|+|||||+|+|+.++..++
T Consensus 28 p~~llI~na~vi~T~D~~~~vi~~gdV~I~dgrI~aVG~~~~~----~~~~~~vIDa~G~~v~PG~ID~H~H~~~~~~~g 103 (479)
T 3hpa_A 28 PKTLLVKHADVLVTMDDTRRELRDAGLYIEDNRIVAVGPSAEL----PETADEVLDLRGHLVIPGLVNTHHHMYQSLTRA 103 (479)
T ss_dssp -CEEEEEEEEEEECCCTTCCEEEEEEEEEETTEEEEEEEGGGS----CSCCSEEEECTTEEEEECEEECCCCGGGGGSCS
T ss_pred CCCEEEECCEEEEeeCCCCCEEcCcEEEEECCEEEEEeCCccC----CCCCCeEEECCCCEEeeCceeHhhCcchhcccc
Confidence 45799999985 5788777889999999999999999987653 234679999999999999999999999988888
Q ss_pred cc--CCCCccccccccccCccCCCChHHHHHHHHHHHHHHHhcCcceeecCCC-----CCHHHHHHHHHHcCCeEEeecc
Q 022028 97 IA--DDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGG-----QHVSEMAKAVELLGLRACLVQS 169 (304)
Q Consensus 97 ~~--~~~~~~~~l~~~~~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~d~~~-----~~~~~~~~~~~~~gir~~~~~~ 169 (304)
.. .+.++..|+.. +++.......++.+.....++.+++..|+|++.+... .......+++...|++......
T Consensus 104 ~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 182 (479)
T 3hpa_A 104 VPAAQNAELFGWLTN-LYKIWAHLTPEMIEVSTLTAMAELLQSGCTTSSDHLYIYPNGSRLDDSIGAAQRIGMRFHASRG 182 (479)
T ss_dssp CTTTTTCCHHHHHHH-HHHHHTTCCHHHHHHHHHHHHHHHHTTTEEEEECCBCCCCTTCCHHHHHHHHHHHTCEEEEEEE
T ss_pred cccCCCcchHHHHhh-hhhhhhhcCHHHHHHHHHHHHHHHHHhCCceecceeeeccchhhHHHHHHHHHHhcchhhhhhh
Confidence 65 35677788764 3445556778888888888999999999999988643 2356677888889998866554
Q ss_pred cccCCC---CCCCCcccCChHHHHHHHHHHHHHHcCCC-CCCeEEEEeeCcccCCCHHHHHHHHHHHHHhCCeeeEEecC
Q 022028 170 TMDCGE---GLPASWAVRTTDDCIQSQKELYAKHHHAA-DGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAE 245 (304)
Q Consensus 170 ~~d~g~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~~~~~~~~~~~~~~e~l~~~~~~a~~~~~~~~~H~~E 245 (304)
....+. ..++...........+...++...+.... .......++++.....+++.+.++.+.|.+.+..+.+|+++
T Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~g~~~~~h~~~ 262 (479)
T 3hpa_A 183 AMSVGQRDGGLPPDSVVEREPDILRDTQRLIETYHDEGRYAMLRVVVAPCSPFSVSRDLMRDAAVLAREYGVSLHTHLAE 262 (479)
T ss_dssp ECC----------------CHHHHHHHHHHHHHHCCCSTTCSEEEEEEESCTTTSCHHHHHHHHHHHHHHTCEEEEEESC
T ss_pred eeeccccccCCCchhhhhhhhhHHHHHHHHHHHhhhhcccccceeEecccccccCCHHHHHHHHHHHHhcCCeEEeeccc
Confidence 433211 11111112223344455566666665543 34456778888889999999999999999999999999999
Q ss_pred ChhhHHHHHHhcCCCCCHHHHHHHhCCCCCCeeEEEeccCCcchhc-----------cccccccccc
Q 022028 246 IPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEVN-----------CTFGNFKYAV 301 (304)
Q Consensus 246 ~~~~~~~~~~~~g~~~~~~~~l~~~g~l~~~~~~~H~~~l~~~di~-----------~p~sN~~l~~ 301 (304)
...+...+.+.+|.. +++++.+.+.++++..+.||+++++.++. ||.++...+.
T Consensus 263 ~~~~~~~~~~~~g~~--~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~ 327 (479)
T 3hpa_A 263 NVNDIAYSREKFGMT--PAEYAEDLGWVGHDVWHAHCVQLDDAGIGLFARTGTGVAHCPCSNMRLAS 327 (479)
T ss_dssp SHHHHHC-------C--HHHHHHHTTCCSTTEEEEECTTCCHHHHHHHHHHTCEEEECHHHHHHTTC
T ss_pred chHHHHHHHHHcCCc--hHHHHhhhccccccceeeeeEecchhHHHHHHhcCCceeecccccccccc
Confidence 998888888888874 89999999999999999999999998876 6776665543
|
| >1p1m_A Hypothetical protein TM0936; putative metal dependent hydrolase, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: b.92.1.4 c.1.9.9 PDB: 2plm_A* 1j6p_A | Back alignment and structure |
|---|
Probab=99.97 E-value=3e-31 Score=240.66 Aligned_cols=250 Identities=24% Similarity=0.379 Sum_probs=195.0
Q ss_pred EEEEccEEEecCCCCceeeeeeEEEeCCEEEEecCChhhhhhhcCCCceEEeCCCCEeeccccccCccchhhhhhcccCC
Q 022028 21 MILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIADD 100 (304)
Q Consensus 21 ~li~~~~ii~~~~~~~~~~~~~I~I~~g~I~~i~~~~~~~~~~~~~~~~vID~~g~iv~PG~ID~H~Hl~~s~~~g~~~~ 100 (304)
++|+|++|+++++. . ..+++|+|+||||++|++.. + +.+ ||++|++|+|||||+|+|+..+..++...+
T Consensus 1 ~li~n~~v~~~~~~-~-~~~~~v~I~~g~I~~vg~~~------~--~~~-iD~~g~~v~PG~ID~H~H~~~~~~~~~~~~ 69 (406)
T 1p1m_A 1 MIIGNCLILKDFSS-E-PFWGAVEIENGTIKRVLQGE------V--KVD-LDLSGKLVMPALFNTHTHAPMTLLRGVAED 69 (406)
T ss_dssp CEEEEEEECCSTTS-C-CEEEEEEEETTEEEEEEESS------C--CCS-EECTTEEEEECEEEEEECGGGGGGTTSSCS
T ss_pred CEEEccEEEecCcc-c-cccceEEEECCEEEEeeCCC------C--cce-ecCCCcEEeecccchhhccchhhhccccCC
Confidence 37899999997643 2 56789999999999998653 1 346 999999999999999999999888887777
Q ss_pred CCccccccccccCccCCCChHHHHHHHHHHHHHHHhcCcceeecCCCCCHHHHHHHHHHcCCeEEeecccccCCCCCCCC
Q 022028 101 VDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQHVSEMAKAVELLGLRACLVQSTMDCGEGLPAS 180 (304)
Q Consensus 101 ~~~~~~l~~~~~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~gir~~~~~~~~d~g~~~~~~ 180 (304)
.++.+|+....|+.....++++++..++.++.+++++||||++++. ...+...+++.+.|+|.+++..+++.+. .
T Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTtv~d~~-~~~~~~~~~~~~~g~r~~~~~~~~~~~~----~ 144 (406)
T 1p1m_A 70 LSFEEWLFSKVLPIEDRLTEKMAYYGTILAQMEMARHGIAGFVDMY-FHEEWIAKAVRDFGMRALLTRGLVDSNG----D 144 (406)
T ss_dssp CCHHHHHHTTHHHHHTTCCHHHHHHHHHHHHHHHHTTTEEEEEEEE-SSHHHHHHHHHHHCCEEEEEEEECCBTT----B
T ss_pred CCHHHHHHhhhccchhcCCHHHHHHHHHHHHHHHHhcCcEEEEech-hCHHHHHHHHHHcCCEEEEEcccccCCC----C
Confidence 7889999888888777788999999988899999999999999976 3456677778889999877665554321 1
Q ss_pred cccCChHHHHHHHHHHHHHHcCCCCCCeEEEEeeCcccCCCHHHHHHHHHHHHHhCCeeeEEecCChhhHHHHHH--hcC
Q 022028 181 WAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMD--TRK 258 (304)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~e~l~~~~~~a~~~~~~~~~H~~E~~~~~~~~~~--~~g 258 (304)
..+.++...+.++.+.+.. +.++..++++.++.++++.+++++++|+++|+++++|+.|+..+.+.+.+ .+|
T Consensus 145 -----~~~~~~~~~~~~~~~~~~~-~~i~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~g 218 (406)
T 1p1m_A 145 -----DGGRLEENLKLYNEWNGFE-GRIFVGFGPHSPYLCSEEYLKRVFDTAKSLNAPVTIHLYETSKEEYDLEDILNIG 218 (406)
T ss_dssp -----CTTHHHHHHHHHHHHTTGG-GTEEEEEEECCTTTSCHHHHHHHHHHHHHTTCCEEEEESCSTTCCCCTHHHHTTT
T ss_pred -----HHHHHHHHHHHHHHhhCCC-CcEEEEEecCccCcCCHHHHHHHHHHHHHCCCcEEEEcCCCchHHHHHHHhhhCC
Confidence 1234455556677665432 56888888988888999999999999999999999999987655544433 232
Q ss_pred CCCCHHHHHHHhCCCCCCeeEEEec---cCCcchhc-----ccccccccccc
Q 022028 259 VDHGTVTFLDKIEFLQNNLLSAHTV---WVNHTEVN-----CTFGNFKYAVH 302 (304)
Q Consensus 259 ~~~~~~~~l~~~g~l~~~~~~~H~~---~l~~~di~-----~p~sN~~l~~~ 302 (304)
+++.|+++ .++.||+ ++++++++ ||.+|.+++..
T Consensus 219 --------~~~~g~~~--~~~~H~~~~~~~~~~~~~~~~~~~p~~~~~~~~~ 260 (406)
T 1p1m_A 219 --------LKEVKTIA--AHCVHLPERYFGVLKDIPFFVSHNPASNLKLGNG 260 (406)
T ss_dssp --------TTTSCEEE--EECTTCCGGGTTTTTTSSEEEEECHHHHHHTTCC
T ss_pred --------HhHcCcce--eEeeeccCcccCCHHHHHHHHHhCcHHHhhcCCC
Confidence 23456554 6899999 99999886 77788877653
|
| >1ra0_A Cytosine deaminase; alpha-beta barrel, hexamer, conformation change, D314G mutant, hydrolase; 1.12A {Escherichia coli} SCOP: b.92.1.2 c.1.9.5 PDB: 1r9x_A 1ra5_A 1r9y_A 1r9z_A 1rak_A 3r0d_A* 3o7u_A* 3rn6_A* 1k6w_A 1k70_A 3g77_A | Back alignment and structure |
|---|
Probab=99.95 E-value=2e-28 Score=223.79 Aligned_cols=252 Identities=13% Similarity=0.111 Sum_probs=171.1
Q ss_pred cccEEEEccEEEecCCCCceeeeeeEEEeCCEEEEecCChhhhhhhcCCCceEEeCCCCEeeccccccCccchhhhhhcc
Q 022028 18 SSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGI 97 (304)
Q Consensus 18 ~~~~li~~~~ii~~~~~~~~~~~~~I~I~~g~I~~i~~~~~~~~~~~~~~~~vID~~g~iv~PG~ID~H~Hl~~s~~~g~ 97 (304)
+.+++|+|++|++++ .+++|+|+||||++|++..+. +..+.++||++|++|+|||||+|+|+..+.+++.
T Consensus 7 ~~~~li~n~~v~~~~------~~~~v~I~~g~I~~vg~~~~~----~~~~~~viD~~G~~v~PGlID~H~Hl~~~~~~~~ 76 (430)
T 1ra0_A 7 NALQTIINARLPGEE------GLWQIHLQDGKISAIDAQSGV----MPITENSLDAEQGLVIPPFVEPHIHLDTTQTAGQ 76 (430)
T ss_dssp -CCCEEEEEBCTTCC------SEEEEEEETTEEEEEEEESSC----CCCCTTEEECTTCEEESCEEEEEECTTTTTCTTS
T ss_pred CCcEEEEeeEecCCC------ceeEEEEECCEEEEeecCCCC----CCCCcceEccCCCEecccccccccchhhhhhcCC
Confidence 345889999999743 578999999999999875432 1124579999999999999999999988777765
Q ss_pred cC---CCCccccccccccCccCCCChHHHHHHHHHHHHHHHhcCcceeecCCCC-C-----HHHHHHHHHHcCCeEEeec
Q 022028 98 AD---DVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQ-H-----VSEMAKAVELLGLRACLVQ 168 (304)
Q Consensus 98 ~~---~~~~~~~l~~~~~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~d~~~~-~-----~~~~~~~~~~~gir~~~~~ 168 (304)
.. +.++.+|+.. .++....+++++++..++.++.+++++||||++++... . .+.+.++.+..+.+....
T Consensus 77 ~~~~~~~~~~~~l~~-~~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 154 (430)
T 1ra0_A 77 PNWNQSGTLFEGIER-WAERKALLTHDDVKQRAWQTLKWQIANGIQHVRTHVDVSDATLTALKAMLEVKQEVAPWIDLQ- 154 (430)
T ss_dssp SSCCSSCCHHHHHHH-HHHHHTTCCHHHHHHHHHHHHHHHHHTTEEEEEEEEECCSTTCHHHHHHHHHHHHHTTTCEEE-
T ss_pred CcCCCCCCHHHHHHH-hHHhhhhcCHHHHHHHHHHHHHHHHhcCccEEeeccccCChHHHHHHHHHHHHHhhhhhEEEE-
Confidence 43 5677888864 45556678899999999999999999999999986522 1 233333333322222111
Q ss_pred ccccCCCCCCCCcccCChHHHHHHHHHHHHHHcCCCCCCeEEEEeeCcccC--CCHHHHHHHHHHHHHhCCeeeEEecCC
Q 022028 169 STMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMN--ATDRLLLETRDMAREFKTGIHMHVAEI 246 (304)
Q Consensus 169 ~~~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~--~~~e~l~~~~~~a~~~~~~~~~H~~E~ 246 (304)
+.+... ...+... ...+..++.++. +.+.+. ..++.+++ ++++.++++++.|+++|+++.+|+.|+
T Consensus 155 -~~~~~~--~~~~~~~---~~~~~~~~~~~~----g~~~~~--~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~~e~ 222 (430)
T 1ra0_A 155 -IVAFPQ--EGILSYP---NGEALLEEALRL----GADVVG--AIPHFEFTREYGVESLHKTFALAQKYDRLIDVHCDEI 222 (430)
T ss_dssp -EEEECT--TCSSSST---THHHHHHHHHHT----TCSEEC--CCGGGSSSHHHHHHHHHHHHHHHHHHTCEEEEEECCS
T ss_pred -EEecCC--cccccCc---hHHHHHHHHHHh----CCCeEe--eeecccccccccHHHHHHHHHHHHHcCCCEEEEECCC
Confidence 111000 0001011 111122222222 223332 23555665 789999999999999999999999887
Q ss_pred hhhHHHHHHhcCCCCCHHHHHHHhCCCCCCeeEEEeccCCcc-------hhc-----------ccccccccc
Q 022028 247 PYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHT-------EVN-----------CTFGNFKYA 300 (304)
Q Consensus 247 ~~~~~~~~~~~g~~~~~~~~l~~~g~l~~~~~~~H~~~l~~~-------di~-----------~p~sN~~l~ 300 (304)
..+.+.+.+. +++++.+.|+ ++++.+.||++++++ +++ ||.+|.+++
T Consensus 223 ~~~~~~~~~~------~~~~~~~~g~-~~~~~i~H~~~~~~~~~~~~~~~i~~~~~~gv~v~~~p~~~~~~~ 287 (430)
T 1ra0_A 223 DDEQSRFVET------VAALAHHEGM-GARVTASHTTAMHSYNGAYTSRLFRLLKMSGINFVANPLVNIHLQ 287 (430)
T ss_dssp SCTTCCHHHH------HHHHHHHHTC-GGGEEEEECGGGGGSCHHHHHHHHHHHHHHTCEEEECHHHHHHHT
T ss_pred CchhHHHHHH------HHHHHHHhCC-CCCEEEEeccccccCChHhHHHHHHHHHHcCCEEEECchhhhhhc
Confidence 6554433331 5678888896 888999999999986 554 899888776
|
| >3feq_A Putative amidohydrolase; unknown source, sargasso SEA, structural GEN protein structure initiative, PSI; 2.63A {Unidentified} PDB: 3lwy_A* 3n2c_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=8.8e-26 Score=205.51 Aligned_cols=228 Identities=17% Similarity=0.176 Sum_probs=156.4
Q ss_pred cccEEEEccEEEecCCCCceeeeeeEEEeCCEEEEecCChhhhhhhcCCCceEEeCCCCEeeccccccCccchhhhhhcc
Q 022028 18 SSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGI 97 (304)
Q Consensus 18 ~~~~li~~~~ii~~~~~~~~~~~~~I~I~~g~I~~i~~~~~~~~~~~~~~~~vID~~g~iv~PG~ID~H~Hl~~s~~~g~ 97 (304)
|++++|+|++|++++. .+++++++|+|+||||++|++.... +.+.++||++|++|+|||||+|+|+..+..
T Consensus 3 ~~~~~i~n~~v~~~~~-~~~~~~~~v~I~~g~I~~vg~~~~~-----~~~~~viD~~G~~v~PGlID~H~H~~~~~~--- 73 (423)
T 3feq_A 3 LTITVLQGGNVLDLER-GVLLEHHHVVIDGERIVEVTDRPVD-----LPNAQAIDVRGKTVMPGFIDCHVHVLASNA--- 73 (423)
T ss_dssp -CEEEEEEEEEEETTT-TEEEEEEEEEEETTEEEEEECSCCC-----CSSCEEEECTTCEEEECEEEEEECTTCCSS---
T ss_pred ceEEEEEccEEEeCCC-CcccCCceEEEECCEEEEecCCCCC-----CCCCeEEeCCCCEECCCeeeeEeeecccCC---
Confidence 6678999999999764 3577889999999999999985321 246799999999999999999999976432
Q ss_pred cCCCCccccccccccCccCCCChHHHHHHHHHHHHHHHhcCcceeecCCCCCHHHHHHHHH---HcCCeEEeecccccCC
Q 022028 98 ADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQHVSEMAKAVE---LLGLRACLVQSTMDCG 174 (304)
Q Consensus 98 ~~~~~~~~~l~~~~~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~d~~~~~~~~~~~~~~---~~gir~~~~~~~~d~g 174 (304)
++ +....+++++.+..+...+.+++++||||++|++... ..+.++.+ ..|+|.+.+...++..
T Consensus 74 ----~~---------~~~~~~~~~~~~~~~~~~~~~~l~~GvTtv~d~~~~~-~~l~~~~~~~~~~g~r~~~~g~~~~~~ 139 (423)
T 3feq_A 74 ----NL---------GVNATQPNILAAIRSLPILDAMLSRGFTSVRDAGGAD-WSLMQAVETGLVSGPRIFPSGKALSQT 139 (423)
T ss_dssp ----CH---------HHHHHSCHHHHHHTHHHHHHHHHHTTEEEEEECSSCC-HHHHHHHHTTSSCSCEEECCCSEEECT
T ss_pred ----Ch---------hhhhcCCHHHHHHHHHHHHHHHHhCCeEEEEeCCCch-HHHHHHHHcCCCCCCeEEecCcccccC
Confidence 11 0112355677788888889999999999999987543 33344433 3588887766554421
Q ss_pred CCCCCC--------------------cccCChHHHHHHHHHHHHHHcCCCCCCeEEEEe--------eCcccCCCHHHHH
Q 022028 175 EGLPAS--------------------WAVRTTDDCIQSQKELYAKHHHAADGRIRIWFG--------IRQIMNATDRLLL 226 (304)
Q Consensus 175 ~~~~~~--------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--------~~~~~~~~~e~l~ 226 (304)
.+.... ......++..+..++.+ ..+.+.+++... |++...++++.++
T Consensus 140 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~----~~g~~~ik~~~~g~~~~~~~p~~~~~~~~e~l~ 215 (423)
T 3feq_A 140 GGHGDFRPRGDLLEPCSCCFRTGAIARVVDGVEGVRLAVREEI----QKGATQIKIMASGGVASPTDPIANTQYSEDEIR 215 (423)
T ss_dssp TSTTCCCCC---CCCCCSSCCTTCSEEECCSHHHHHHHHHHHH----HTTCSSEEEECBCCSSSSSCCTTSBCSCHHHHH
T ss_pred CCCccccccccccccccccccccccceecCCHHHHHHHHHHHH----HcCCCEEEEeccCCcCCCCCCcccccCCHHHHH
Confidence 111100 00122333333333333 334567887654 5566789999999
Q ss_pred HHHHHHHHhCCeeeEEecCChhhHHHHHHhcCCCCCHHHHHHHhCCCCCCeeEEEeccCCcchhc
Q 022028 227 ETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEVN 291 (304)
Q Consensus 227 ~~~~~a~~~~~~~~~H~~E~~~~~~~~~~~~g~~~~~~~~l~~~g~l~~~~~~~H~~~l~~~di~ 291 (304)
++++.|+++|+++.+|+.+. ... +...+.|. ..+.||.++++++++
T Consensus 216 ~~~~~A~~~g~~v~~H~~~~-~~i--------------~~~l~~g~----~~i~H~~~~~~~~~~ 261 (423)
T 3feq_A 216 AIVDEAEAANTYVMAHAYTG-RAI--------------ARAVRCGV----RTIEHGNLVDEAAAK 261 (423)
T ss_dssp HHHHHHHHTTCCEEEEEEEH-HHH--------------HHHHHHTC----CEEEEEEECCHHHHH
T ss_pred HHHHHHHHCCCeEEEEeCCh-HHH--------------HHHHHcCC----CEEeccCcCCHHHHH
Confidence 99999999999999999743 222 22223444 268899999988765
|
| >2r8c_A Putative amidohydrolase; unknown source, sargasso SEA, structural genomics, protein structure initiative, PSI; 2.31A {Unidentified} PDB: 3mkv_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=1.6e-24 Score=197.58 Aligned_cols=229 Identities=14% Similarity=0.177 Sum_probs=157.6
Q ss_pred CcccEEEEccEEEecCCCCceeeeeeEEEeCCEEEEecCChhhhhhhcCCCceEEeCCCCEeeccccccCccchhhhhhc
Q 022028 17 SSSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKG 96 (304)
Q Consensus 17 ~~~~~li~~~~ii~~~~~~~~~~~~~I~I~~g~I~~i~~~~~~~~~~~~~~~~vID~~g~iv~PG~ID~H~Hl~~s~~~g 96 (304)
+|.+++|+|++|++++. ..++++++|+|+||||++|++.... +.+.++||++|++|+|||||+|+|+..+..
T Consensus 2 ~m~~~~i~n~~i~~~~~-~~~~~~~~i~i~~g~I~~i~~~~~~-----~~~~~~iD~~g~~v~PGliD~H~H~~~~~~-- 73 (426)
T 2r8c_A 2 SLTTFLFRNGALLDPDH-PDLLQGFEILIEDGFIREVSDKPIK-----SSNAHVIDVKGKTIMPGLIDLHVHVVAIEF-- 73 (426)
T ss_dssp --CEEEEEEEEECCTTS-SSCEEEEEEEEESSBEEEEESSCCC-----CSSCEEEECTTCEEEECEEEEEECTTCCSS--
T ss_pred CcccEEEEeeEEEeCCC-CcccCCceEEEECCEEEEEcCCCCC-----CCCCeEEECCCCEEcCCeEeeeeccccccC--
Confidence 35678999999999753 3567889999999999999985321 236799999999999999999999976432
Q ss_pred ccCCCCccccccccccCccCCCChHHHHHHHHHHHHHHHhcCcceeecCCCCCHHHHHHHHHH---cCCeEEeecccccC
Q 022028 97 IADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQHVSEMAKAVEL---LGLRACLVQSTMDC 173 (304)
Q Consensus 97 ~~~~~~~~~~l~~~~~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~d~~~~~~~~~~~~~~~---~gir~~~~~~~~d~ 173 (304)
.+. ....+++++.+..+...+.+++++||||++|++... ..+.++.+. .|+|.+.+...++.
T Consensus 74 -----~~~---------~~~~~~~~~~~~~~~~~~~~~l~~GvTtv~d~~~~~-~~l~~~i~~~~~~gpri~~~g~~i~~ 138 (426)
T 2r8c_A 74 -----NLP---------RVATLPNVLVTLRAVPIMRAMLRRGFTTVRDAGGAG-YPFKQAVESGLVEGPRLFVSGRALSQ 138 (426)
T ss_dssp -----CHH---------HHHHSCHHHHHHHHHHHHHHHHHTTEEEEEECSSCC-HHHHHHHHTTSSCCCEEEECCSEEEC
T ss_pred -----Cch---------hhccCCHHHHHHHHHHHHHHHHhCCeEEEEeCCCch-HHHHHHHHcCCCCCCeEEecCCcccC
Confidence 110 112356777888888899999999999999998543 233444333 57888776555432
Q ss_pred CCCCCC-----------------------CcccCChHHHHHHHHHHHHHHcCCCCCCeEEEEe--------eCcccCCCH
Q 022028 174 GEGLPA-----------------------SWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFG--------IRQIMNATD 222 (304)
Q Consensus 174 g~~~~~-----------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--------~~~~~~~~~ 222 (304)
..+... .......++..+..++.++. +.+.++++.. |++...+++
T Consensus 139 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~----g~~~ik~~~~G~~~~~~~p~~~~~~~~ 214 (426)
T 2r8c_A 139 TGGHADPRARSDYMPPDSPCGCCVRVGALGRVADGVDEVRRAVREELQM----GADQIKIMASGGVASPTDPVGVFGYSE 214 (426)
T ss_dssp TTSTTCCCCCSSBCCCSCSSSSBCCTTCCEEECCSHHHHHHHHHHHHHH----TCSSEEEECBCCSSSSSCCSSCBCSCH
T ss_pred CCCCcccccccccccccccccccccccccccccCCHHHHHHHHHHHHHc----CCCEEEEEecCCCCCCCCCcccccCCH
Confidence 111100 00112344555555555543 3456777654 555668999
Q ss_pred HHHHHHHHHHHHhCCeeeEEecCChhhHHHHHHhcCCCCCHHHHHHHhCCCCCCeeEEEeccCCcchhc
Q 022028 223 RLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEVN 291 (304)
Q Consensus 223 e~l~~~~~~a~~~~~~~~~H~~E~~~~~~~~~~~~g~~~~~~~~l~~~g~l~~~~~~~H~~~l~~~di~ 291 (304)
+.++++++.|+++|+++.+|+.+. ... +...+.|. ..+.||.++++++++
T Consensus 215 e~l~~~~~~A~~~g~~v~~H~~~~-~~i--------------~~al~~G~----~~i~H~~~~~~~~~~ 264 (426)
T 2r8c_A 215 DEIRAIVAEAQGRGTYVLAHAYTP-AAI--------------ARAVRCGV----RTIEHGNLIDDETAR 264 (426)
T ss_dssp HHHHHHHHHHHHTTCCEEEEECSH-HHH--------------HHHHHTTC----SEEEECTTCCHHHHH
T ss_pred HHHHHHHHHHHHcCCEEEEEeCCh-HHH--------------HHHHHcCC----CEEecCCcCCHHHHH
Confidence 999999999999999999999743 222 22223443 258899999988765
|
| >2qt3_A N-isopropylammelide isopropyl amidohydrolase; N-isopropylammelide isopropylaminohydrolase ATZC, structural genomics, NYSGXRC, target 9364B; 2.24A {Pseudomonas SP} | Back alignment and structure |
|---|
Probab=99.92 E-value=3.6e-25 Score=200.29 Aligned_cols=234 Identities=16% Similarity=0.128 Sum_probs=153.4
Q ss_pred cccEEEEccEEEecCCCCceeeeeeEEEeCCEEEEecCChhhhhhhcCCCceEEeCCCCEeeccccccCccchhhhh---
Q 022028 18 SSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLA--- 94 (304)
Q Consensus 18 ~~~~li~~~~ii~~~~~~~~~~~~~I~I~~g~I~~i~~~~~~~~~~~~~~~~vID~~g~iv~PG~ID~H~Hl~~s~~--- 94 (304)
+.+++|+|++|++++ . .++|+|+||||++|++..+. .+.++||++|++|+|||||+|+|+..+.+
T Consensus 4 ~~~~li~n~~v~~~~---~---~~~v~I~~g~I~~vg~~~~~------~~~~viD~~G~~v~PGlID~H~H~~~~~~~~~ 71 (403)
T 2qt3_A 4 DFDLIIRNAYLSEKD---S---VYDIGIVGDRIIKIEAKIEG------TVKDEIDAKGNLVSPGFVDAHTHMDKSFTSTG 71 (403)
T ss_dssp CEEEEEEEEEETTTT---E---EEEEEEETTEEEEEESSCCS------CEEEEEECTTCBEEECEEEEEECGGGTTTTCS
T ss_pred ccceEEEeeEecCCC---e---eEEEEEECCEEEEeecCCCC------CccceEcCCCCEecccceeeeeccchhhcccc
Confidence 356899999999743 1 17999999999999976431 13579999999999999999999988764
Q ss_pred ------hccc--CCCCccccccccccCccCCCChHHHHHHHHHHHHHHHhcCcceeecCCC---CC----HHHHHHHHHH
Q 022028 95 ------KGIA--DDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGG---QH----VSEMAKAVEL 159 (304)
Q Consensus 95 ------~g~~--~~~~~~~~l~~~~~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~d~~~---~~----~~~~~~~~~~ 159 (304)
++.. ...++.+|+.. ++ .. ++++++..+...+.+++++||||++++.. .. .+.+.++.++
T Consensus 72 ~~~~~~~g~~~~~~~~l~~~~~~--~~--~~-~~~~~~~~~~~~~~~~l~~GvTtv~~~~~~~~~~~~~~~~~~~~~~~~ 146 (403)
T 2qt3_A 72 ERLPKFWSRPYTRDAAIEDGLKY--YK--NA-THEEIKRHVIEHAHMQVLHGTLYTRTHVDVDSVAKTKAVEAVLEAKEE 146 (403)
T ss_dssp SSSCTTCSSCCCHHHHHHHHHHH--HH--HC-CHHHHHHHHHHHHHHHHHTTEEEEEEEEECSTTTTTHHHHHHHHHHHH
T ss_pred cccccccCCCcccCcCHHHHHHH--hh--hc-CHHHHHHHHHHHHHHHHHcCCcEEEEEEcccCccccchHHHHHHHHHH
Confidence 2211 11235666653 22 22 78899999999999999999999965432 11 2344455554
Q ss_pred cCCeEEeecccccCCCCCCCCcccCChHHHHHHHHHHHHHHcCCCCCCeEEEEeeCcccCCCHHHHHHHHHHHHHhCCee
Q 022028 160 LGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGI 239 (304)
Q Consensus 160 ~gir~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~e~l~~~~~~a~~~~~~~ 239 (304)
.+..... .+... +.... ....+ .+++++++...+.+.+ ..+.|+..+.++++.+++++++|+++|+++
T Consensus 147 ~~~~~~~--~~~~~----~~~~~-~~~~~----~~~~~~~~~~~g~~~~-~~~~p~~~~~~~~~~l~~~~~~A~~~g~~v 214 (403)
T 2qt3_A 147 LKDLIDI--QVVAF----AQSGF-FVDLE----SESLIRKSLDMGCDLV-GGVDPATRENNVEGSLDLCFKLAKEYDVDI 214 (403)
T ss_dssp HTTTCEE--EEEEE----CTTCT-TTSTT----HHHHHHHHHHTTCSEE-ECBCTTTTTSCHHHHHHHHHHHHHHTTCEE
T ss_pred hhcceeE--EEEEc----CCccc-ccCcc----hHHHHHHHHhcCCCeE-EEecCCCCCCChHHHHHHHHHHHHHcCCCe
Confidence 3321111 01110 00000 00111 1223333222222222 235576667778899999999999999999
Q ss_pred eEEecCChhhHHHHHHhcCCCCCHHHHHHHhCCCCCCeeEEEeccCCc
Q 022028 240 HMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNH 287 (304)
Q Consensus 240 ~~H~~E~~~~~~~~~~~~g~~~~~~~~l~~~g~l~~~~~~~H~~~l~~ 287 (304)
++|+.|...+.....+. .++++.+.|+ ++++.+.||+++++
T Consensus 215 ~~H~~~~~~~~~~~~~~------~~~~~~~~g~-~~~~~i~H~~~~~~ 255 (403)
T 2qt3_A 215 DYHIHDIGTVGVYSINR------LAQKTIENGY-KGRVTTSHAWCFAD 255 (403)
T ss_dssp EEEECCCHHHHHHHHHH------HHHHHHHTTC-TTSEEEEECTHHHH
T ss_pred EEEeCCcccchhHHHHH------HHHHHHHcCC-CCCeEEEehhhhcc
Confidence 99999987755443331 4677778887 78899999999986
|
| >2qs8_A XAA-Pro dipeptidase; amidohydrolase, TIM barrel, protein structure initiative, PSI-2, NYSGXRC, structural genomics; 2.33A {Alteromonas macleodii} SCOP: b.92.1.9 c.1.9.18 | Back alignment and structure |
|---|
Probab=99.91 E-value=6.2e-23 Score=186.60 Aligned_cols=232 Identities=16% Similarity=0.143 Sum_probs=149.3
Q ss_pred ccEEEEccEEEecCCCCceeeeeeEEEeCCEEEEecCChhhhhhhcCCCc--eEEeCCCCEeeccccccCccchhhhhhc
Q 022028 19 STMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMAD--QIIDLQSQILLPGFVNTHVHTSQQLAKG 96 (304)
Q Consensus 19 ~~~li~~~~ii~~~~~~~~~~~~~I~I~~g~I~~i~~~~~~~~~~~~~~~--~vID~~g~iv~PG~ID~H~Hl~~s~~~g 96 (304)
.+++|+|++|++++.. .++.+++|+|+||||++|++.. . + .+. ++||++|++|+|||||+|+|+..+.
T Consensus 7 ~~~li~n~~v~~~~~~-~~~~~~~v~I~~g~I~~vg~~~-~----~-~~~~~~viD~~g~~v~PGlID~H~H~~~~~--- 76 (418)
T 2qs8_A 7 SKTLIHAGKLIDGKSD-QVQSRISIVIDGNIISDIKKGF-I----S-SNDFEDYIDLRDHTVLPGLMDMHVHFGQEY--- 76 (418)
T ss_dssp CCEEEEEEEECCSSCS-SCEEEEEEEEETTEEEEEEESC-C----C-CTTSSEEEEEEEEEEEECEEEEEECTTCCC---
T ss_pred ccEEEEeeEEEeCCCC-ccccCcEEEEECCEEEEEeCCC-C----C-CCCcceEEECCCCEECCCeeeeeeccccCC---
Confidence 3578999999997643 4667899999999999998753 1 1 245 8999999999999999999997632
Q ss_pred ccCCCCccccccccccCccCCCChHHHHHHHHHHHHHHHhcCcceeecCCCC-CHHHHHHHHHHcC----CeEEeecccc
Q 022028 97 IADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQ-HVSEMAKAVELLG----LRACLVQSTM 171 (304)
Q Consensus 97 ~~~~~~~~~~l~~~~~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~d~~~~-~~~~~~~~~~~~g----ir~~~~~~~~ 171 (304)
.+..| .. ...++++.+..+..++.+++++||||++|+... .....++.+.+.| .|.+.+...+
T Consensus 77 -----~~~~~-~~------~~~~~~~~~~~~~~~~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~~g~~~~~r~~~~~~~~ 144 (418)
T 2qs8_A 77 -----QSKAQ-AP------IKVEREMQAILATQHAYVTFKSGFTTVRQVGDSGLVAISLRDAINSGKLAGPRIFAAGKTI 144 (418)
T ss_dssp -----CCTTT-SC------SCCCHHHHHHHHHHHHHHHHHTTEEEEEECCCSSSHHHHHHHHHHTTSSCCCEEEECCSCB
T ss_pred -----CCCch-hh------hcCCHHHHHHHHHHHHHHHHHcCCCEEEeCCCCccccHHHHHHHHCCCCCCCeEEecCccc
Confidence 22334 11 124677778888888999999999999998642 2333444445544 3665543222
Q ss_pred -------cCCCCCCCCcccC-----ChHHHHHHHHHHHHHHcCCCCCCeEEEEe-----eC---cccCCCHHHHHHHHHH
Q 022028 172 -------DCGEGLPASWAVR-----TTDDCIQSQKELYAKHHHAADGRIRIWFG-----IR---QIMNATDRLLLETRDM 231 (304)
Q Consensus 172 -------d~g~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~i~~~~~-----~~---~~~~~~~e~l~~~~~~ 231 (304)
+.++.+.+.+... ......++.++.+++....+.+.++++.. ++ +...++++.++++++.
T Consensus 145 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ik~~~~g~~~~~~~~~g~~~~~~~~l~~~~~~ 224 (418)
T 2qs8_A 145 ATTGGHADPTNGKAVDDYDYPVPEQGVVNGPYEVYAAVRQRYKDGADGIKITVTGGVLSVAKSGQNPQFTQEEVDAVVSA 224 (418)
T ss_dssp EETTCTTCTTTTCCGGGCCCCCGGGTEECSHHHHHHHHHHHHHHTCSEEEEECBCCSSSSSSCSSCBCSCHHHHHHHHHH
T ss_pred cccCCCccccccccccccccccccccccCCHHHHHHHHHHHHHcCCCEEEEEecCCCCCCCCCCCcccCCHHHHHHHHHH
Confidence 1012122211110 00111222333333222122356776542 22 2356899999999999
Q ss_pred HHHhCCeeeEEecCChhhHHHHHHhcCCCCCHHHHHHHhCCCCCCeeEEEeccCCcchhc
Q 022028 232 AREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEVN 291 (304)
Q Consensus 232 a~~~~~~~~~H~~E~~~~~~~~~~~~g~~~~~~~~l~~~g~l~~~~~~~H~~~l~~~di~ 291 (304)
|+++|+++.+|+.+ ... ++.+.+.|. ..+.||+++++++++
T Consensus 225 A~~~g~~v~~H~~~-~~~--------------i~~~~~~g~----~~i~H~~~~~~~~i~ 265 (418)
T 2qs8_A 225 AKDYGMWVAVHAHG-AEG--------------MKRAIKAGV----DSIEHGTFMDLEAMD 265 (418)
T ss_dssp HHHTTCEEEEEECS-HHH--------------HHHHHHHTC----SEEEECTTCCHHHHH
T ss_pred HHHcCCEEEEEECC-HHH--------------HHHHHHcCC----CEEEECCCCCHHHHH
Confidence 99999999999853 222 222223443 368999999998887
|
| >3be7_A Zn-dependent arginine carboxypeptidase; unknown source, amidohydrolase, sargasso SEA, structural GEN protein structure initiative, PSI; HET: ARG; 2.30A {Unidentified} SCOP: b.92.1.9 c.1.9.18 PDB: 3dug_A* | Back alignment and structure |
|---|
Probab=99.90 E-value=2.6e-22 Score=181.83 Aligned_cols=232 Identities=13% Similarity=0.192 Sum_probs=148.2
Q ss_pred CCcccEEEEccEEEecCCCCceeeeeeEEEeCCEEEEecCChhhhhhhcCCCceEEeCCCCEeeccccccCccchhhhhh
Q 022028 16 GSSSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAK 95 (304)
Q Consensus 16 ~~~~~~li~~~~ii~~~~~~~~~~~~~I~I~~g~I~~i~~~~~~~~~~~~~~~~vID~~g~iv~PG~ID~H~Hl~~s~~~ 95 (304)
.|+.+++|+|++|++++.. .+++ ++|+|+||||++|++. . + .+.++||++|++|+|||||+|+|+. +.
T Consensus 3 ~~~~~~~i~n~~v~~~~~~-~~~~-~~v~I~~g~I~~ig~~-~-----~-~~~~viD~~g~~v~PGlID~H~H~~-~~-- 70 (408)
T 3be7_A 3 LTSEDFLIKSKGYLDIQTG-EIIK-ADLLIRNGKIAEIGKI-N-----T-KDATVISIPDLILIPGLMDSHVHIV-GN-- 70 (408)
T ss_dssp --CCCEEEEEEEEECTTTC-CEEC-CEEEEETTEEEEEECC-C-----C-SSSEEEEEEEEEEEECEEEEEECCS-SC--
T ss_pred cccceEEEEeeEEEeCCCC-ceee-eEEEEECCEEEEEeCC-C-----C-CCCeEEECCCCEECcCceeeeEccc-CC--
Confidence 3456789999999987642 4566 8999999999999876 2 1 2468999999999999999999996 32
Q ss_pred cccCCCCccccccccccCccCCCChHHHHHHHHHHHHHHHhcCcceeecCCCC-CHHHHHHHHHHcCC----eEEeeccc
Q 022028 96 GIADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQ-HVSEMAKAVELLGL----RACLVQST 170 (304)
Q Consensus 96 g~~~~~~~~~~l~~~~~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~d~~~~-~~~~~~~~~~~~gi----r~~~~~~~ 170 (304)
.+..| .. + ..++++.+..+...+.+++++||||++++... .....++.+.+.|. |.+.....
T Consensus 71 ------~~~~~-~~-~-----~~~~~~~~~~~~~~~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~ 137 (408)
T 3be7_A 71 ------DSKGE-ES-I-----ADSSHMGTVWGVVNAEKTLMAGFTTVRNVGAANYADVSVRDAIERGVINGPTMLVSGPA 137 (408)
T ss_dssp ------CCCSG-GG-T-----TCCTHHHHHHHHHHHHHHHTTTEEEEEECCCSTTHHHHHHHHHHTTSSCCCEEEECCSC
T ss_pred ------CCcch-hh-h-----cCCHHHHHHHHHHHHHHHHHcCCCEEEeCCCccccCHHHHHHHHCCCCCCCEEEEccce
Confidence 11233 21 1 24677778888888999999999999998752 23333444455554 55443211
Q ss_pred c-cCC-----CCCCCCcccCC--hHHHHHHHHHHHHHHcCCCCCCeEEEEe-----eC---cccCCCHHHHHHHHHHHHH
Q 022028 171 M-DCG-----EGLPASWAVRT--TDDCIQSQKELYAKHHHAADGRIRIWFG-----IR---QIMNATDRLLLETRDMARE 234 (304)
Q Consensus 171 ~-d~g-----~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~i~~~~~-----~~---~~~~~~~e~l~~~~~~a~~ 234 (304)
. ..+ +.+.+.+.... .....++.++.+++....+.+.+++... +. +...++++.+++++++|++
T Consensus 138 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ik~~~~g~~~~~~~~~g~~~~~~~~l~~~~~~A~~ 217 (408)
T 3be7_A 138 LGITGGHCDHNLLPPEFNYSSEGVVDSPWEARKMVRKNRKYGADLIKFCATGGVMSRNTDVNAKQFTLEEMKAIVDEAHN 217 (408)
T ss_dssp BBCTTSTTSCCCSCTTTCCCCTTBCCSHHHHHHHHHHHHHTTCSEEEEECBCCSSSSSCCTTSBCSCHHHHHHHHHHHHH
T ss_pred eeccCCCCccccccccccccCCcccCCHHHHHHHHHHHHhcCCCEEEEEecCCcCCCCCCCCCCCCCHHHHHHHHHHHHH
Confidence 1 111 11111111000 0111233444444433333456666532 21 2356789999999999999
Q ss_pred hCCeeeEEecCChhhHHHHHHhcCCCCCHHHHHHHhCCCCCCeeEEEeccCCcchhc
Q 022028 235 FKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEVN 291 (304)
Q Consensus 235 ~~~~~~~H~~E~~~~~~~~~~~~g~~~~~~~~l~~~g~l~~~~~~~H~~~l~~~di~ 291 (304)
+|+++.+|+.+.. .++.+.+.|. ..+.||+++++++++
T Consensus 218 ~g~~v~~H~~~~~---------------~i~~~~~~g~----~~i~H~~~~~~~~i~ 255 (408)
T 3be7_A 218 HGMKVAAHAHGLI---------------GIKAAIKAGV----DSVEHASFIDDETID 255 (408)
T ss_dssp TTCEEEEEECSHH---------------HHHHHHHHTC----SEEEECTTCCHHHHH
T ss_pred CCCEEEEEeCCHH---------------HHHHHHHcCC----CEEEECCCCCHHHHH
Confidence 9999999996532 2333334554 368999999988876
|
| >1yrr_A N-acetylglucosamine-6-phosphate deacetylase; (beta/alpha)8 barrel, beta sandwich, hydrolase; 2.00A {Escherichia coli} SCOP: b.92.1.5 c.1.9.10 PDB: 1ymy_A 2p50_A 2p53_A* | Back alignment and structure |
|---|
Probab=99.89 E-value=3.3e-24 Score=192.84 Aligned_cols=229 Identities=14% Similarity=0.073 Sum_probs=137.8
Q ss_pred EEEEccEEEecCCCCceeeeeeEEEeCCEEEEecCChhhhhhhcCCCceEEeCCCCEeeccccccCccchhhhhhcccCC
Q 022028 21 MILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIADD 100 (304)
Q Consensus 21 ~li~~~~ii~~~~~~~~~~~~~I~I~~g~I~~i~~~~~~~~~~~~~~~~vID~~g~iv~PG~ID~H~Hl~~s~~~g~~~~ 100 (304)
++|+|++|++++ .++++++|+|+||||++|++..+. + .+.++||++|++|+|||||+|+|+...
T Consensus 2 ~li~~~~v~~~~---~~~~~~~v~I~~g~I~~vg~~~~~----~-~~~~viD~~g~~v~PGlID~H~H~~~g-------- 65 (382)
T 1yrr_A 2 YALTQGRIFTGH---EFLDDHAVVIADGLIKSVCPVAEL----P-PEIEQRSLNGAILSPGFIDVQLNGCGG-------- 65 (382)
T ss_dssp EEEESSEEECSS---CEESSEEEEEETTEEEEEEEGGGS----C-TTCCEEECTTCEEEECEEEEEESEETT--------
T ss_pred EEEEeeEEEcCC---ceeeCCEEEEECCEEEEEecCCCC----C-ccceeecCCCCEEccCEEEEeecccCC--------
Confidence 579999999865 367889999999999999875432 1 245799999999999999999998641
Q ss_pred CCccccccccccCccCCCChHHHHHHHHHHHHHHHhcCcceeecCCCC-CH-------HHHHHHHHHcCCeEEeeccccc
Q 022028 101 VDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQ-HV-------SEMAKAVELLGLRACLVQSTMD 172 (304)
Q Consensus 101 ~~~~~~l~~~~~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~d~~~~-~~-------~~~~~~~~~~gir~~~~~~~~d 172 (304)
..+..|+ ..+++++++. .+.+++++||||++++... .. ..+.++.++.|.|.. +. .-
T Consensus 66 ~~~~~~~--------~~~~~~~~~~----~~~~~l~~GvTtv~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~-g~--~~ 130 (382)
T 1yrr_A 66 VQFNDTA--------EAVSVETLEI----MQKANEKSGCTNYLPTLITTSDELMKQGVRVMREYLAKHPNQAL-GL--HL 130 (382)
T ss_dssp EESSSST--------TTSSHHHHHH----HHHHHHHTTEEEEEEEEECCCHHHHHHHHHHHHHHHHHCTTSBC-CE--EE
T ss_pred cCccccc--------cCCCHHHHHH----HHHHHHhCCeEEEEeecCCCCHHHHHHHHHHHHHHhhccCCcee-EE--EE
Confidence 1122221 2345665543 5678999999999986432 11 122333333466632 21 11
Q ss_pred CCCCCCCCcccCChHHHHH-HHHHHHHHHcCCCCCCeEEE-EeeCcccCCCHHHHHHHHHHHHHhCCeeeE-EecCChhh
Q 022028 173 CGEGLPASWAVRTTDDCIQ-SQKELYAKHHHAADGRIRIW-FGIRQIMNATDRLLLETRDMAREFKTGIHM-HVAEIPYE 249 (304)
Q Consensus 173 ~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~i~~~-~~~~~~~~~~~e~l~~~~~~a~~~~~~~~~-H~~E~~~~ 249 (304)
.++.+.+.+.+....+.++ ..++.++ +...+.+.++.. ++|. +.+.++.+.|+++|+++++ |+.|+..+
T Consensus 131 ~g~~~~~~~~g~~~~~~~~~~~~~~~~-~~~~~~~~ik~~~~~~~-------~~~~~~~~~a~~~g~~v~~gH~~~~~~~ 202 (382)
T 1yrr_A 131 EGPWLNLVKKGTHNPNFVRKPDAALVD-FLCENADVITKVTLAPE-------MVPAEVISKLANAGIVVSAGHSNATLKE 202 (382)
T ss_dssp ECSSCCCSCC-CCCSCSCCHHHHHHHH-HHHHTTTTEEEEEECGG-------GSCHHHHHHHHHTTCEEEECSCCCCHHH
T ss_pred eCCcCCccccCCCCHHHccCCCHHHHH-HHHhcCCCEEEEEECCC-------CChHHHHHHHHHCCCEEEEECCCCCHHH
Confidence 2322222111110000011 1123333 222244677642 3332 4455688999999999999 99988887
Q ss_pred HHHHHHhcCCCCCHHHHHH---------HhCCCCC-----Ce---eEEEeccCCcchhc
Q 022028 250 NQVVMDTRKVDHGTVTFLD---------KIEFLQN-----NL---LSAHTVWVNHTEVN 291 (304)
Q Consensus 250 ~~~~~~~~g~~~~~~~~l~---------~~g~l~~-----~~---~~~H~~~l~~~di~ 291 (304)
...+.+ .|.+ .++++. +.|++++ ++ ++.||+++++++++
T Consensus 203 ~~~~~~-~G~~--~~~h~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~h~~~~~~~~~~ 258 (382)
T 1yrr_A 203 AKAGFR-AGIT--FATHLYNAMPYITGREPGLAGAILDEADIYCGIIADGLHVDYANIR 258 (382)
T ss_dssp HHHHHH-HTCC--EESSTTTTSCCBCSSCCHHHHHHHHCTTCEEEEECSSSSSCHHHHH
T ss_pred HHHHHH-cCCC--eeEECCCCCCccccCCcchhhHhhcCCcceeeecCcccccCHHHHH
Confidence 766665 3542 333331 1222221 33 78999999998875
|
| >2bb0_A Imidazolonepropionase; TIM barrel, hydrolase; 2.00A {Bacillus subtilis} SCOP: b.92.1.10 c.1.9.17 PDB: 2g3f_A | Back alignment and structure |
|---|
Probab=99.89 E-value=4.5e-22 Score=181.12 Aligned_cols=250 Identities=18% Similarity=0.204 Sum_probs=152.4
Q ss_pred ccEEEEc-cEEEecCCCC----------ceeeeeeEEEeCCEEEEecCCh-hhhhhhcCCCceEEeCCCCEeeccccccC
Q 022028 19 STMILHN-AVIVTMDKES----------RVFRNGGVFVVQDRIKAIGQSA-DILQQFSQMADQIIDLQSQILLPGFVNTH 86 (304)
Q Consensus 19 ~~~li~~-~~ii~~~~~~----------~~~~~~~I~I~~g~I~~i~~~~-~~~~~~~~~~~~vID~~g~iv~PG~ID~H 86 (304)
.+++|+| ++|+++++.. .++.+++|+|+||||++|++.. +. ..+ ..++||++|++|+|||||+|
T Consensus 5 ~d~li~n~g~I~t~~~~~~~~~~~~~~~~~~~~~~v~I~~g~I~~vg~~~~~~--~~~--~~~viD~~G~~v~PGfID~H 80 (421)
T 2bb0_A 5 IDTILINIGQLLTMESSGPRAGKSMQDLHVIEDAVVGIHEQKIVFAGQKGAEA--GYE--ADEIIDCSGRLVTPGLVDPH 80 (421)
T ss_dssp EEEEEEEEEEECCCCCSSCCCGGGGTCCCCEEEEEEEEETTEEEEEEETTTTT--TCE--EEEEEECTTCEEEECEEECC
T ss_pred ccEEEECCcEEEecCCCccccccccccccccccceEEEECCEEEEEecccccc--cCC--CCeEEeCCCCEeccCeeccC
Confidence 4588999 9999876432 3467899999999999998753 10 001 25799999999999999999
Q ss_pred ccchhhhhhcccCCCCcccccccccc--------------CccCCCChHHHHHHHHHHHHHHHhcCcceeecCCC--CCH
Q 022028 87 VHTSQQLAKGIADDVDLMTWLHDRIW--------------PYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGG--QHV 150 (304)
Q Consensus 87 ~Hl~~s~~~g~~~~~~~~~~l~~~~~--------------~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~d~~~--~~~ 150 (304)
+|+.....+. ..+..|+....+ ......++++++..+..++.+++++||||+.+... ...
T Consensus 81 ~H~~~~~~~~----~~~~~~~~g~~~~~~~~~gggi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GvTt~~~~~~~~~~~ 156 (421)
T 2bb0_A 81 THLVFGGSRE----KEMNLKLQGISYLDILAQGGGILSTVKDTRAASEEELLQKAHFHLQRMLSYGTTTAEVKSGYGLEK 156 (421)
T ss_dssp BCCCCCSCCG----GGHHHHHTTCCHHHHHHTTCTHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTTEEEEEEECCSCCSH
T ss_pred cCccccccch----HHHHHHHhCCCHHHHhhcCCCcccchhhhhcCCHHHHHHHHHHHHHHHHhcCceEEEeccccCcCc
Confidence 9997543221 112222211000 00112467777878888899999999999988531 111
Q ss_pred ---HHHHHH----HHHcCCeEEeecccccCCCCCCCCcccCChHHHHHHHHHHHHHHcCCC-CCCeEEEEeeCcccCCCH
Q 022028 151 ---SEMAKA----VELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAA-DGRIRIWFGIRQIMNATD 222 (304)
Q Consensus 151 ---~~~~~~----~~~~gir~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~~~~~~~~~~~~~~ 222 (304)
....++ ....++|........ ...++.+. ......++...+.++.+...+ .+.+.. .. ....+++
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~--~~~~~~~ 229 (421)
T 2bb0_A 157 ETELKQLRVAKKLHESQPVDLVSTFMGA---HAIPPEYQ-NDPDDFLDQMLSLLPEIKEQELASFADI-FT--ETGVFTV 229 (421)
T ss_dssp HHHHHHHHHHHHHHHHSSSEEEEEEEEE---SSCCGGGT-TCHHHHHHHHHTTHHHHHHTTCCSEEEE-BB--CTTSBCH
T ss_pred cchHHHHHHHHHHHhhcCceEEEEeecc---ccCChhhc-ccHHHHHHHHHHhhHHhhccCccccccc-cC--CcCCCCH
Confidence 122223 344466654322110 01122221 112333333222333332111 111211 11 2234588
Q ss_pred HHHHHHHHHHHHhCCeeeEEecCChhhHHHHHHhcCCCCCHHHHHHHhCCCCCCeeEEEeccCCcchhc-----------
Q 022028 223 RLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEVN----------- 291 (304)
Q Consensus 223 e~l~~~~~~a~~~~~~~~~H~~E~~~~~~~~~~~~g~~~~~~~~l~~~g~l~~~~~~~H~~~l~~~di~----------- 291 (304)
+.++++++.|+++|+++++|+.|... + ..++.+.+.|.+ .+.||+++++++++
T Consensus 230 e~l~~~~~~a~~~g~~v~~H~~~~~~--------~----~~~~~~~~~g~~----~~~H~~~~~~~~i~~~~~~g~~~~~ 293 (421)
T 2bb0_A 230 SQSRRYLQKAAEAGFGLKIHADEIDP--------L----GGAELAGKLKAV----SADHLVGTSDEGIKKLAEAGTIAVL 293 (421)
T ss_dssp HHHHHHHHHHHHTTCEEEEEECSSSC--------C----SHHHHHHHTTCS----EEEECTTCCHHHHHHHHHHTCEEEE
T ss_pred HHHHHHHHHHHHCCCCEEEEeccccc--------c----CHHHHHHHcCCc----EEhhhhcCCHHHHHHHHHcCCeEEE
Confidence 99999999999999999999987542 1 156666666643 58999999999987
Q ss_pred cccccccc
Q 022028 292 CTFGNFKY 299 (304)
Q Consensus 292 ~p~sN~~l 299 (304)
||.+|.++
T Consensus 294 ~p~~~~~l 301 (421)
T 2bb0_A 294 LPGTTFYL 301 (421)
T ss_dssp CHHHHHHT
T ss_pred CCchhhhh
Confidence 88888776
|
| >2q09_A Imidazolonepropionase; 9252H, NYSGXRC, 3-(2, 5-dioxo-imidazo 4YL)-propionic acid, PSI-2 community, structural genomics, structure initiative; HET: DI6; 1.97A {Unidentified} SCOP: b.92.1.10 c.1.9.17 PDB: 2oof_A* | Back alignment and structure |
|---|
Probab=99.89 E-value=1.5e-22 Score=184.08 Aligned_cols=251 Identities=14% Similarity=0.142 Sum_probs=154.6
Q ss_pred cEEEEccEEEecCCC---CceeeeeeEEEeCCEEEEecCChhhhhhhcCCCceEEeCCCCEeeccccccCccchhhhhhc
Q 022028 20 TMILHNAVIVTMDKE---SRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKG 96 (304)
Q Consensus 20 ~~li~~~~ii~~~~~---~~~~~~~~I~I~~g~I~~i~~~~~~~~~~~~~~~~vID~~g~iv~PG~ID~H~Hl~~s~~~g 96 (304)
+++|+|++++++++. ..++.+++|+|+||||++|++..+.+. + .+.++||++|++|+|||||+|+|+..+..++
T Consensus 6 ~~li~n~~i~t~~~~~~~~~~~~~~~v~I~~g~I~~vg~~~~~~~-~--~~~~viD~~G~~v~PG~ID~H~H~~~~~~~~ 82 (416)
T 2q09_A 6 ERVWLNVTPATLRSDLADYGLLEPHALGVHEGRIHALVPMQDLKG-P--YPAHWQDMKGKLVTPGLIDCHTHLIFAGSRA 82 (416)
T ss_dssp SEEEEEEEEBCCCTTSSTTCBCSSEEEEEETTEEEEEEEGGGCC-----CCTTSEECTTCEEEECEEEEEECCCCCSCCH
T ss_pred cEEEEcCeEeccCcccccccccccceEEEECCEEEEEcChhhccc-c--CCCeEEeCCCCEECCcccccccCcchhhhhH
Confidence 578999999987753 245678899999999999997643210 0 1347899999999999999999997643321
Q ss_pred ccCCCCcccccccccc--------------CccCCCChHHHHHHHHHHHHHHHhcCcceeecCCC--CCH-------HHH
Q 022028 97 IADDVDLMTWLHDRIW--------------PYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGG--QHV-------SEM 153 (304)
Q Consensus 97 ~~~~~~~~~~l~~~~~--------------~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~d~~~--~~~-------~~~ 153 (304)
..+..|+....| .....+++++++..++.++.+++++||||+.++.. ... +.+
T Consensus 83 ----~~~~~~~~g~~~~~~~~~~g~~~~~~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~~~~~~~~~~~~~~~~~~~~ 158 (416)
T 2q09_A 83 ----EEFELRQKGVPYAEIARKGGGIISTVRATRAASEDQLFELALPRVKSLIREGVTTVEIKSGYGLTLEDELKMLRVA 158 (416)
T ss_dssp ----HHHHHHHTTCCHHHHHHTTCTHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHTEEEEEEECCSCCSHHHHHHHHHHH
T ss_pred ----HHHHHHHhcCCHHHhhhcCCcEeehhhhccCCCHHHHHHHHHHHHHHHHHcCCcEEEeccCcccChHhHHHHHHHH
Confidence 011122211000 00113467888888888899999999999998542 111 122
Q ss_pred HHHHHHcCCeEEeecccccCCCCCCCCcccCChHHHHHHHH-HHHHHHcCCCCCCeEEEEeeCcccCCCHHHHHHHHHHH
Q 022028 154 AKAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQK-ELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMA 232 (304)
Q Consensus 154 ~~~~~~~gir~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~~~~~~~~~~~~~e~l~~~~~~a 232 (304)
.++....++|......... .+++.+.. ...+.++... ++++.+... +.....-.......++++.++++++.|
T Consensus 159 ~~~~~~~~~r~~~~~~~~~---~~~~~~~~-~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~a 232 (416)
T 2q09_A 159 RRLGEALPIRVKTTLLAAH---AVPPEYRD-DPDSWVETICQEIIPAAAEA--GLADAVDVFCEHIGFSLAQTEQVYLAA 232 (416)
T ss_dssp HHHHHHSSSEEEEEEEEET---SCCGGGTT-CHHHHHHHHHHTHHHHHHHT--TCCSEEEEBBSTTSBCHHHHHHHHHHH
T ss_pred HHHHhhCCceEEEeeeccc---cCCccccC-CHHHHHHHHHhhhhHHHHhc--ccccccccccCCCcCCHHHHHHHHHHH
Confidence 2233456777653321110 11222211 1233444322 234443321 111111112223356889999999999
Q ss_pred HHhCCeeeEEecCChhhHHHHHHhcCCCCCHHHHHHHhCCCCCCeeEEEeccCCcchhc-----------cccccccc
Q 022028 233 REFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEVN-----------CTFGNFKY 299 (304)
Q Consensus 233 ~~~~~~~~~H~~E~~~~~~~~~~~~g~~~~~~~~l~~~g~l~~~~~~~H~~~l~~~di~-----------~p~sN~~l 299 (304)
+++|+++.+|+.+.... ..++.+.+.|. ..+.||+++++++++ ||.+|.++
T Consensus 233 ~~~g~~v~~H~~~~~~~------------~~~~~~~~~g~----~~~~H~~~~~~~~~~~~~~~g~~~~~~p~~~~~~ 294 (416)
T 2q09_A 233 DQYGLAVKGHMDQLSNL------------GGSTLAANFGA----LSVDHLEYLDPEGIQALAHRGVVATLLPTAFYFL 294 (416)
T ss_dssp HHTTCEEEEEESSSCCC------------SHHHHHHHTTC----SEEEECTTCCHHHHHHHHHHTCEEEECHHHHHHT
T ss_pred HHCCCcEEEEECCCCch------------HHHHHHHHcCC----CEEeecccCCHHHHHHHHHcCCeEEEcCccHHhh
Confidence 99999999999875420 14555556665 258999999998886 78888766
|
| >2p9b_A Possible prolidase; protein structure initiative II, PSI-2, amidohydrolase, structural genomics; 1.70A {Bifidobacterium longum NCC2705} SCOP: b.92.1.10 c.1.9.17 | Back alignment and structure |
|---|
Probab=99.89 E-value=5.3e-22 Score=182.61 Aligned_cols=245 Identities=16% Similarity=0.108 Sum_probs=138.6
Q ss_pred cccEEEEccEEEecCCCCceeeeeeEEE-eCCEEEEecCChhhhhhhcCCCceEEeCCCCEeeccccccCccchhhhhh-
Q 022028 18 SSTMILHNAVIVTMDKESRVFRNGGVFV-VQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAK- 95 (304)
Q Consensus 18 ~~~~li~~~~ii~~~~~~~~~~~~~I~I-~~g~I~~i~~~~~~~~~~~~~~~~vID~~g~iv~PG~ID~H~Hl~~s~~~- 95 (304)
..+++|+|++|++++.. .++.+++|+| +||||++|++..... .+.+.++||++|++|+|||||+|+|+..+..+
T Consensus 12 ~~~~li~n~~i~~~~~~-~~~~~~~v~I~~~g~I~~Vg~~~~~~---~~~~~~viD~~G~~v~PG~ID~H~H~~~~~~~~ 87 (458)
T 2p9b_A 12 EPFALAHATIVTGDKAG-TILRNMTIVVGADGRIEQVAPSIETS---IPAEYHYLDGTGKIVMPGLINAHTHLFSQGKPL 87 (458)
T ss_dssp CCEEEEEEEEECCCTTC-CEEEEEEEEECTTSBEEEEEEGGGCC---CCTTCEEEECTTCEEEECEEEEEECSCC-----
T ss_pred CCcEEEEeeEEEeCCCC-ccccCcEEEEecCCEEEEEeccccCC---CCCCCeEEECCCCEEccceeeeeeccccccccc
Confidence 45689999999997643 5667889999 999999998732211 01246899999999999999999999875533
Q ss_pred cccCCCCccccccccccCccCCCChHHHHHHHHHHHHHHHhcCcceeecCCCC-CHHHHHHHHHHcC----CeEEeeccc
Q 022028 96 GIADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQ-HVSEMAKAVELLG----LRACLVQST 170 (304)
Q Consensus 96 g~~~~~~~~~~l~~~~~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~d~~~~-~~~~~~~~~~~~g----ir~~~~~~~ 170 (304)
+...+.....|+....| ...+++++.+...+.++.+++++||||++++... ......+.+.+.| .|.+.....
T Consensus 88 ~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~~g~~~g~r~~~~g~~ 165 (458)
T 2p9b_A 88 NPKLATPKGQRMVATFA--HSPLGKPYMAATVKHNATTLLESGVTTIRTLGDVGYEVVTLRDQIDAGQILGPRILASGPL 165 (458)
T ss_dssp --------------------------CHHHHHHHHHHHHHHTTEEEEEESCCSSSHHHHHHHHHHTTSSCCCEEECCCSC
T ss_pred cccccchhhhhhhhhhh--hhcccccHHHHHHHHHHHHHHHcCCcEEEeCCCCccccHHHHHHHHcCCCCCCeEEecccc
Confidence 11112222222221111 1123334455566678899999999999998642 2333344444444 355543322
Q ss_pred ccCCCCCCC-Cc--ccCChHHHHHHHHHHHHHHcCCCCCCeEEEEe-----eC-----cccCCCHHHHHHHHHHHHHhCC
Q 022028 171 MDCGEGLPA-SW--AVRTTDDCIQSQKELYAKHHHAADGRIRIWFG-----IR-----QIMNATDRLLLETRDMAREFKT 237 (304)
Q Consensus 171 ~d~g~~~~~-~~--~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~-----~~-----~~~~~~~e~l~~~~~~a~~~~~ 237 (304)
+....+... .+ .....++. .+.+++....+.+.+|++.. +. +...++++.++++++.|+++|+
T Consensus 166 ~~~~g~~~~~~~~~~~~~~~~~----~~~~~~~~~~g~~~ik~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~g~ 241 (458)
T 2p9b_A 166 MAIPEGHGAPLIALTSGTPEEA----RTAVAQNLKAGVNAIKIAATGGVTDAQEIGEAGSPQMSVEQMRAICDEAHQYGV 241 (458)
T ss_dssp EECCCSSCCCCEECCSCCHHHH----HHHHHHHHHTTCSCEEEECSCCTTSCCCC------CCCHHHHHHHHHHHHHTTC
T ss_pred cccCCCCCccccCccCCCHHHH----HHHHHHHHHcCCCEEEEEecCCcCCCCccCCCCCCcCCHHHHHHHHHHHHHCCC
Confidence 211101110 00 11122222 22233322233456776543 22 2346789999999999999999
Q ss_pred eeeEEecCChhhHHHHHHhcCCCCCHHHHHHHhCCCCCCeeEEEeccCCcchhc
Q 022028 238 GIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEVN 291 (304)
Q Consensus 238 ~~~~H~~E~~~~~~~~~~~~g~~~~~~~~l~~~g~l~~~~~~~H~~~l~~~di~ 291 (304)
++.+|+.+ .... +...+.|. ..+.||+++++++++
T Consensus 242 ~v~~H~~~-~~~i--------------~~~~~~G~----~~i~H~~~~~~~~~~ 276 (458)
T 2p9b_A 242 IVGAHAQS-PEGV--------------RRSLLAGV----DTIEHGSVLDDELIG 276 (458)
T ss_dssp CEEEEECS-HHHH--------------HHHHHHTC----SEEEECCCCCHHHHH
T ss_pred eEEEEeCC-HHHH--------------HHHHHcCC----CEEEECCCCCHHHHH
Confidence 99999853 3222 22223453 368999999987765
|
| >2puz_A Imidazolonepropionase; NYSGXRC, PSI-2, N-formimino-L- glutamate, product-bound, structural genomics, protein STRU initiative; HET: NIG; 1.83A {Agrobacterium tumefaciens str} SCOP: b.92.1.10 c.1.9.17 PDB: 2gok_A | Back alignment and structure |
|---|
Probab=99.88 E-value=3.6e-22 Score=181.57 Aligned_cols=255 Identities=16% Similarity=0.181 Sum_probs=151.7
Q ss_pred cccEEEEccEEEecCCC---CceeeeeeEEEeCCEEEEecCChhhhhhhcCCCceEEeCCCCEeeccccccCccchhhhh
Q 022028 18 SSTMILHNAVIVTMDKE---SRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLA 94 (304)
Q Consensus 18 ~~~~li~~~~ii~~~~~---~~~~~~~~I~I~~g~I~~i~~~~~~~~~~~~~~~~vID~~g~iv~PG~ID~H~Hl~~s~~ 94 (304)
+.+++|+|+.++++++. ..++.+++|+|+||||++|++..+.+..++ .+.++||++|++|+|||||+|+|+.....
T Consensus 14 ~~~~li~n~~i~t~~~~~~~~~~~~~~~v~I~~g~I~~vg~~~~~~~~~~-~~~~viD~~G~~v~PG~ID~H~H~~~~~~ 92 (419)
T 2puz_A 14 NATALWRNAQLATLNPAMDGIGAVENAVIAVRNGRIAFAGPESDLPDDLS-TADETTDCGGRWITPALIDCHTHLVFGGN 92 (419)
T ss_dssp -CEEEEEEEEEECCCTTSSTTCEEEEEEEEEETTEEEEEEETTSCCGGGS-CCSEEEECTTCEEEECEEECCCCCCCSSC
T ss_pred CCcEEEECCeEeccCcccccCCcccceEEEEECCEEEEEcChhhhhhhcc-CCCeEEeCCCCEeCcCceecccCccchhh
Confidence 35689999999998753 356678999999999999997643211111 13589999999999999999999965322
Q ss_pred hcccCCCCccccccccc--------------cCccCCCChHHHHHHHHHHHHHHHhcCcceeecCCC--CCH---HHHHH
Q 022028 95 KGIADDVDLMTWLHDRI--------------WPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGG--QHV---SEMAK 155 (304)
Q Consensus 95 ~g~~~~~~~~~~l~~~~--------------~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~d~~~--~~~---~~~~~ 155 (304)
+. ..+..|+.... .......++++++..+..++.+++++|+|++.+... ... ....+
T Consensus 93 ~~----~~~~~~~~~~~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GvTt~~~~~~~~~~~~~~~~~~~ 168 (419)
T 2puz_A 93 RA----MEFEMRLNGATYEEIAKAGGGIVSSVRDTRALSDEVLVAQALPRLDTLLSEGVSTIEIKSGYGLDIETELKMLR 168 (419)
T ss_dssp CH----HHHHHHHTTCCHHHHHHTTCSHHHHHHHHHHSCHHHHHHHHHHHHHHHHTTTEEEEEEECCSCCSHHHHHHHHH
T ss_pred hH----HHHHHHhcCCCHHHHHhcCCCeecchhhhccCCHHHHHHHHHHHHHHHHhcCCeEEEeCCCCCCCchhHHHHHH
Confidence 11 00111111000 000112457777777788889999999999987432 111 12334
Q ss_pred HHHH----cCCeEEeecccccCCCCCCCCcccCChHHHHHHH-HHHHHHHcCCCCCCeEEEEeeCcccCCCHHHHHHHHH
Q 022028 156 AVEL----LGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQ-KELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRD 230 (304)
Q Consensus 156 ~~~~----~gir~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~i~~~~~~~~~~~~~~e~l~~~~~ 230 (304)
++.+ .++|....... ....++.+. ......++.. .+.++.+... +.....-.......++++.++++++
T Consensus 169 ~~~~~~~~~~~r~~~~~~~---~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (419)
T 2puz_A 169 VARRLETLRPVRIVTSYLA---AHATPADYK-GRNADYITDVVLPGLEKAHAE--GLADAVDGFCEGIAFSVKEIDRVFA 242 (419)
T ss_dssp HHHHHTTTSSCEEEEEECC---TTCCCGGGT-TCHHHHHHHTHHHHHHHHHHT--TCCSEECCEESTTSBCHHHHHHHHH
T ss_pred HHHHHhhhcCceEEEEecc---cccCchhhc-ccHHHHHHHHHhhhhhhhhhc--ccccccccccCCCCcCHHHHHHHHH
Confidence 4433 34554322111 011122221 1123333322 2233333321 1111110111123457899999999
Q ss_pred HHHHhCCeeeEEecCChhhHHHHHHhcCCCCCHHHHHHHhCCCCCCeeEEEeccCCcchhc-----------cccccccc
Q 022028 231 MAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEVN-----------CTFGNFKY 299 (304)
Q Consensus 231 ~a~~~~~~~~~H~~E~~~~~~~~~~~~g~~~~~~~~l~~~g~l~~~~~~~H~~~l~~~di~-----------~p~sN~~l 299 (304)
.|+++|+++.+|+.+.... ..++.+.+.|.. .+.||.++++++++ ||.+|..+
T Consensus 243 ~a~~~g~~v~~H~~~~~~~------------~~~~~~~~~g~~----~~~H~~~~~~~~~~~~~~~g~~~~~~p~~~~~l 306 (419)
T 2puz_A 243 AAQQRGLPVKLHAEQLSNL------------GGAELAASYNAL----SADHLEYLDETGAKALAKAGTVAVLLPGAFYAL 306 (419)
T ss_dssp HHHHTTCCBEEEESSSSCC------------SHHHHHHHTTCS----EEEECTTCCHHHHHHHHHHTCEEEECHHHHHHH
T ss_pred HHHHCCCcEEEEecccccC------------CHHHHHHhcCCc----eehHhccCCHHHHHHHHHcCCcEEECCchhhhh
Confidence 9999999999999875320 156666666653 47899999999886 78777665
|
| >2vhl_A N-acetylglucosamine-6-phosphate deacetylase; N- acetyleglucosamine-6-phosphate, carbohydrate metabolism, hydrolase; HET: GLP PGE; 2.05A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=99.84 E-value=2.1e-21 Score=175.26 Aligned_cols=227 Identities=16% Similarity=0.194 Sum_probs=133.6
Q ss_pred cccEEEEccEEEecCCCCceeeeeeEEEeCCEEEEecCChhhhhhhcCCCceEEeCC-CCEeeccccccCccchhhhhhc
Q 022028 18 SSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQ-SQILLPGFVNTHVHTSQQLAKG 96 (304)
Q Consensus 18 ~~~~li~~~~ii~~~~~~~~~~~~~I~I~~g~I~~i~~~~~~~~~~~~~~~~vID~~-g~iv~PG~ID~H~Hl~~s~~~g 96 (304)
+.+++|+|++|++++ .++.+++|+|+||||++|++..+. . .+.++||++ |++|+|||||+|+|+..+.
T Consensus 2 ~~~~li~~~~v~~~~---~~~~~~~v~I~~g~I~~ig~~~~~----~-~~~~viD~~~g~~v~PGlID~H~H~~~~~--- 70 (396)
T 2vhl_A 2 AESLLIKDIAIVTEN---EVIKNGYVGINDGKISTVSTERPK----E-PYSKEIQAPADSVLLPGMIDIHIHGGYGA--- 70 (396)
T ss_dssp -CCEEEEEEEEECSS---CEEEEEEEEEETTEEEEEESSCCS----S-CCSEEEECCTTCEEEECEEEEEECEETTE---
T ss_pred CccEEEEeeEEEcCC---ccccCceEEEECCEEEEEECCCCC----C-CCCceEcCCCCCEEcCCEEEEeecCCcCc---
Confidence 346899999999865 356789999999999999832110 1 145899999 9999999999999996631
Q ss_pred ccCCCCccccccccccCccCCCChHHHHHHHHHHHHHHHhcCcceeecCCCC-CHH-------HHHHHHHH-c----CC-
Q 022028 97 IADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQ-HVS-------EMAKAVEL-L----GL- 162 (304)
Q Consensus 97 ~~~~~~~~~~l~~~~~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~d~~~~-~~~-------~~~~~~~~-~----gi- 162 (304)
+ +. ..++++++ .++.+++++||||++++... ... ...+...+ . |.
T Consensus 71 -----~---~~---------~~~~e~~~----~~~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~p~~g~~ 129 (396)
T 2vhl_A 71 -----D---TM---------DASFSTLD----IMSSRLPEEGTTSFLATTITQEHGNISQALVNAREWKAAEESSLLGAE 129 (396)
T ss_dssp -----E---GG---------GCSHHHHH----HHHHHGGGGTEEEEEEECCSCCHHHHHHHHHHHHHHHHHCSGGGSSSE
T ss_pred -----c---cc---------CCCHHHHH----HHHHHHHcCCeeEEEecccCCCHHHHHHHHHHHHHHHhcccccccccc
Confidence 1 10 13456554 35778999999999997632 221 12222222 2 32
Q ss_pred -eEE-eecccccC-CCCCC-CCcccCChHHHHHHHHHHHHHHcCCCCCCeE-EEEeeCcccCCCHHHHHHHHHHHHHhCC
Q 022028 163 -RAC-LVQSTMDC-GEGLP-ASWAVRTTDDCIQSQKELYAKHHHAADGRIR-IWFGIRQIMNATDRLLLETRDMAREFKT 237 (304)
Q Consensus 163 -r~~-~~~~~~d~-g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~-~~~~~~~~~~~~~e~l~~~~~~a~~~~~ 237 (304)
+.+ ....+.+. ..+.. ...... ...+.++++.....+.++ +.++|+.+.. + ++.+.|+++|+
T Consensus 130 ~~~~~~~~~~~~~~~~g~~~~~~~~~-------~~~~~~~~~~~~~~~~ik~~~~~p~~~~~-----~-~~~~~a~~~g~ 196 (396)
T 2vhl_A 130 LLGIHLEGPFVSPKRAGAQPKEWIRP-------SDVELFKKWQQEAGGLIKIVTLAPEEDQH-----F-ELIRHLKDESI 196 (396)
T ss_dssp EEEEEEECSSSCGGGCTTSCGGGCCC-------CCHHHHHHHHHHTTTCEEEEEECGGGSGG-----G-HHHHHHHHTTC
T ss_pred eEEEeeecCccCccccCCCCHHHccC-------CCHHHHHHHHHhcCCcceEEEECCCCCCH-----H-HHHHHHHHCCC
Confidence 221 11111110 00100 011100 112233333322346676 4456654432 2 46788899999
Q ss_pred eeeE-EecCChhhHHHHHHhcCCC--------CCHHHHHHHhCCCC-----CCe---eEEEeccCCcchhc
Q 022028 238 GIHM-HVAEIPYENQVVMDTRKVD--------HGTVTFLDKIEFLQ-----NNL---LSAHTVWVNHTEVN 291 (304)
Q Consensus 238 ~~~~-H~~E~~~~~~~~~~~~g~~--------~~~~~~l~~~g~l~-----~~~---~~~H~~~l~~~di~ 291 (304)
++++ |+.|+..+.+.+.+ .|.. .+++++ ++.|+++ +++ ++.||++++++++.
T Consensus 197 ~v~~gH~~~~~~~~~~a~~-~G~~~i~H~~~~~~~~~~-~~~G~~~~~~~~~~~~~e~~~h~~~l~~~~~~ 265 (396)
T 2vhl_A 197 IASMGHTDADSALLSDAAK-AGASHMTHLYNAMSPFHH-REPGVIGTALAHDGFVTELIADGIHSHPLAAK 265 (396)
T ss_dssp EEEECSBCCCHHHHHHHHH-TTCCEESSTTSSBCCCCS-SSCHHHHHHHHCTTCEEEEECSSSSSCHHHHH
T ss_pred EEeecccCCCHHHHHHHHH-cCCCEeEeCCccCccccc-CCCCchhhhhcCCCcEEEEcCCccccCHHHHH
Confidence 9999 99999888877766 3321 012221 2233332 444 78999999988765
|
| >3ooq_A Amidohydrolase; structural genomics, protein structure INI NEW YORK structural genomix research consortium, NYSGXRC, H PSI-2; 2.06A {Thermotoga maritima} | Back alignment and structure |
|---|
Probab=99.83 E-value=1e-21 Score=177.47 Aligned_cols=114 Identities=21% Similarity=0.389 Sum_probs=90.9
Q ss_pred ccEEEEccEEEecCCCCceeeeeeEEEeCCEEEEecCChhhhhhhcCCCceEEeCCCCEeeccccccCccchhhhhhccc
Q 022028 19 STMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIA 98 (304)
Q Consensus 19 ~~~li~~~~ii~~~~~~~~~~~~~I~I~~g~I~~i~~~~~~~~~~~~~~~~vID~~g~iv~PG~ID~H~Hl~~s~~~g~~ 98 (304)
.+++|+|++|+++++ .... ++|+|+||||++|++..+ +.+.++||++|++|+|||||+|+|+..+.. +..
T Consensus 5 ~~~~i~~~~i~~~~~--~~~~-~~v~i~~g~I~~i~~~~~------~~~~~~id~~g~~~~Pg~~d~h~h~~~~~~-~~~ 74 (396)
T 3ooq_A 5 VKILFKNATVFPITS--RPFK-GDVLVSNGKVEKVGENIE------DPDAEIVDLTGKFLFPGFVDAHSHIGLFEE-GVG 74 (396)
T ss_dssp -CEEEEEEEECCSSS--CCEE-EEEEEETTEEEEEESCCC------CTTSEEEECTTCEEEECEEEEEECTTTSCT-TSC
T ss_pred ceEEEECcEEEeCCC--CeEE-eEEEEECCEEEEecCCCC------CCCCeEEECCCCEEecCEEecccccCcccc-Ccc
Confidence 457899999999763 3444 899999999999998653 135789999999999999999999987554 111
Q ss_pred CCCCccccccccccCccCCCChHHHHHHHHHHHHHHHhcCcceeecC
Q 022028 99 DDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEA 145 (304)
Q Consensus 99 ~~~~~~~~l~~~~~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~d~ 145 (304)
.-..|+.+..++....++.++.+.....++.+++++||||+.++
T Consensus 75 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GvTtv~~~ 118 (396)
T 3ooq_A 75 ---YYYSDGNEATDPVTPHVKALDGFNPQDPAIERALAGGVTSVMIV 118 (396)
T ss_dssp ---GGGCCSCCTTCSBCTTCBGGGGCCTTCHHHHHHHTTTEEEEEEC
T ss_pred ---ccccccccccCccCccccHhhhcCcCcHHHHHHHhCCeEEEecc
Confidence 11467777777887888888877777778889999999999987
|
| >2fty_A Dihydropyrimidinase; alpha/beta barrel, beta-sandwich, hydrolase; HET: KCX; 2.40A {Lachancea kluyveri} SCOP: b.92.1.3 c.1.9.6 PDB: 2fvk_A* 2fvm_A* | Back alignment and structure |
|---|
Probab=99.83 E-value=2e-19 Score=169.01 Aligned_cols=190 Identities=15% Similarity=0.178 Sum_probs=123.1
Q ss_pred cEEEEccEEEecCCCCceeeeeeEEEeCCEEEEecCChhhhhhhcCCCceEEeCCCCEeeccccccCccchhhhhhcccC
Q 022028 20 TMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIAD 99 (304)
Q Consensus 20 ~~li~~~~ii~~~~~~~~~~~~~I~I~~g~I~~i~~~~~~~~~~~~~~~~vID~~g~iv~PG~ID~H~Hl~~s~~~g~~~ 99 (304)
+++|+|++|++++. . .+++|+|+||||++|++..+. + .+.++||++|++|+|||||+|+|+..+...+
T Consensus 4 ~~li~n~~vv~~~~---~-~~~~v~I~~g~I~~Ig~~~~~----~-~~~~viD~~g~~v~PGlID~H~H~~~~~~~~--- 71 (559)
T 2fty_A 4 DLIIKNGIICTASD---I-YAAEIAVNNGKVQLIAASIDP----S-LGSEVIDAEGAFITPGGIDAHVHVDEPLKLL--- 71 (559)
T ss_dssp EEEEESCEEECSSC---E-EECEEEEETTEEEEEESCCCG----G-GEEEEEECTTCEEEECEEECCBCCCCTTCTT---
T ss_pred eEEEECcEEEcCCC---c-eeeeEEEECCEEEEecCCCCC----C-CCCeEEeCCCCEEEcCEEeeccCcCcccccc---
Confidence 57999999998652 2 578999999999999875431 1 2458999999999999999999997632100
Q ss_pred CCCccccccccccCccCCCChHHHHHHHHHHHHHHHhcCcceeecCCCCC-----HHHHHHHH----HHcCCe-EEeecc
Q 022028 100 DVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQH-----VSEMAKAV----ELLGLR-ACLVQS 169 (304)
Q Consensus 100 ~~~~~~~l~~~~~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~d~~~~~-----~~~~~~~~----~~~gir-~~~~~~ 169 (304)
..++++++.. ...++++||||++++.... ...+.+++ ++.+.+ ..+...
T Consensus 72 -----------------~~~~e~~~~~----~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 130 (559)
T 2fty_A 72 -----------------GDVVDTMEHA----TRSAVAGGTTTVVAFSTQDVSKKGPSALAESVKLDVDEYSEQTLYCDYG 130 (559)
T ss_dssp -----------------SCCSCCHHHH----HHHHHHTTEEEEEEEEECCTTCCSTTHHHHHHHHHHHHHTTSCCSSEEE
T ss_pred -----------------CCCHHHHHHH----HHHHHhCcEEEEEECcCcccCCcchHHHHHHHHHHHHHHHhhcceeEEE
Confidence 0023333333 3456899999999975322 12244555 555554 211110
Q ss_pred cccCCCCCCCCcccCChHH---HH-HHHHHHHHHHcCCCCCCeEEEEeeCcccCCCHHHHHHHHHHHHHhCCeeeEEecC
Q 022028 170 TMDCGEGLPASWAVRTTDD---CI-QSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAE 245 (304)
Q Consensus 170 ~~d~g~~~~~~~~~~~~~~---~~-~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~e~l~~~~~~a~~~~~~~~~H~~E 245 (304)
+... ...+. ....+ .+ ++..++++++ +...+++.+++++ +.++++.++++++.|+++|+++++|+ |
T Consensus 131 ~~~~----~~~~~-~~~~~~g~~l~~~~~~l~~~~---G~~~iki~~~~~~-~~~s~e~l~~~~~~A~~~g~~v~~H~-e 200 (559)
T 2fty_A 131 LHLI----LFQIE-KPSVEARELLDVQLQAAYNDY---GVSSVKMFMTYPG-LQISDYDIMSAMYATRKNGFTTMLHA-E 200 (559)
T ss_dssp EEEE----CCCCC-SSHHHHHHHHHHHHHHHHHHH---CCCEEEEESSSTT-TBCCHHHHHHHHHHHHHHTCEEEEEC-C
T ss_pred eeee----eccCc-CCCchhhhhHHHHHHHHHHHC---CCCEEEEEecCCC-CcCCHHHHHHHHHHHHhCCCEEEEEC-C
Confidence 1000 00110 01233 45 5566666444 2356787777766 67899999999999999999999998 5
Q ss_pred ChhhHHH
Q 022028 246 IPYENQV 252 (304)
Q Consensus 246 ~~~~~~~ 252 (304)
.......
T Consensus 201 ~~~~i~~ 207 (559)
T 2fty_A 201 NGDMVKW 207 (559)
T ss_dssp CHHHHHH
T ss_pred ChHHHHH
Confidence 5554443
|
| >2vr2_A Dihydropyrimidinase; hydantoinase, metal-binding, disease mutation, dihydropyrimi amidohydrolase, nucleotide metabolism, DPYS, dhpase, hydrolase; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.81 E-value=8.6e-20 Score=171.22 Aligned_cols=191 Identities=17% Similarity=0.214 Sum_probs=113.2
Q ss_pred ccEEEEccEEEecCCCCceeeeeeEEEeCCEEEEecCChhhhhhhcCCCceEEeCCCCEeeccccccCccchhhhhhccc
Q 022028 19 STMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIA 98 (304)
Q Consensus 19 ~~~li~~~~ii~~~~~~~~~~~~~I~I~~g~I~~i~~~~~~~~~~~~~~~~vID~~g~iv~PG~ID~H~Hl~~s~~~g~~ 98 (304)
.+++|+|++|++.+ .. .+++|+|+||||++|++..+.+... ..+.++||++|++|+|||||+|+|+..... +
T Consensus 27 ~~~lI~ng~Vv~~~---~~-~~~dV~I~dGrI~~Ig~~~~~~~~~-~~~~~vIDa~G~~V~PG~ID~H~Hl~~~~~-~-- 98 (541)
T 2vr2_A 27 SRLLIRGGRVVNDD---FS-EVADVLVEDGVVRALGHDLLPPGGA-PAGLRVLDAAGKLVLPGGIDTHTHMQFPFM-G-- 98 (541)
T ss_dssp CEEEEESCEEECSS---CE-EECEEEEETTEEEEEEC------------CEEEECTTSEEEECEEEEEECTTCBCS-S--
T ss_pred CCEEEECcEEEcCC---Cc-eEeeEEEECCEEEEeccCCCCCccc-ccCceEEECCCCEEccCEEEecccCCCCCC-C--
Confidence 56899999999854 23 4689999999999999764321000 012389999999999999999999965210 0
Q ss_pred CCCCccccccccccCccCCCChHHHHHHHHHHHHHHHhcCcceeecCCCCC-HHHHHHHHHHcCCeEEeecccccCCCCC
Q 022028 99 DDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQH-VSEMAKAVELLGLRACLVQSTMDCGEGL 177 (304)
Q Consensus 99 ~~~~~~~~l~~~~~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~d~~~~~-~~~~~~~~~~~gir~~~~~~~~d~g~~~ 177 (304)
..++++++.. ...++++||||++++.... ...+.++++..+.+.. .....+.+...
T Consensus 99 ------------------~~~~e~~~~~----~~~al~~GvTtv~d~~~~~~~~~~~~a~~~~~~~~~-~~~~~~~g~h~ 155 (541)
T 2vr2_A 99 ------------------SRSIDDFHQG----TKAALSGGTTMIIDFAIPQKGGSLIEAFETWRSWAD-PKVCCDYSLHV 155 (541)
T ss_dssp ------------------SBCSCCTTHH----HHHHHTTTEEEEEEEECCCTTCCHHHHHHHHHHHHT-TTCSSEEEEEE
T ss_pred ------------------CcCHHHHHHH----HHHHHhCCeeeeccccCCCCCCCHHHHHHHHHHHhc-cCceEEEeeee
Confidence 0112223322 2346789999999864211 1112222222222110 00011110000
Q ss_pred -CCCcccCChHHHHHHHHHHHHHHcCCCCCCeEEEEeeCcccCCCHHHHHHHHHHHHHhCCeeeEEecCChh
Q 022028 178 -PASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPY 248 (304)
Q Consensus 178 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~e~l~~~~~~a~~~~~~~~~H~~E~~~ 248 (304)
.+.+ .....++..++++. .+...+++++++++.+.++++.++++++.|+++++.+++|+ |...
T Consensus 156 ~~~~~----~~~~~~el~~l~~~---~G~~~~k~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~-e~~~ 219 (541)
T 2vr2_A 156 AVTWW----SDQVKEEMKILVQD---KGVNSFKMFMAYKDLYMVTDLELYEAFSRCKEIGAIAQVHA-ENGD 219 (541)
T ss_dssp EECSC----SHHHHHHHHHHHHT---SCCCEEEEESSSTTTTBCCHHHHHHHHHHHHHHTCEEEEEC-SCHH
T ss_pred cccCC----CHHHHHHHHHHHHh---CCCCEEEEEeccCCccCCCHHHHHHHHHHHHHcCCEEEEEc-CCHH
Confidence 0011 12333444444432 23456777777777788999999999999999999999997 6654
|
| >2vm8_A Dihydropyrimidinase-related protein 2; neurogenesis, phosphoprotein, differentiation, CRMP, cytoplasm, TIM barrel, polymorphism, axonal pathfinding; 1.9A {Homo sapiens} PDB: 2gse_A 1kcx_A | Back alignment and structure |
|---|
Probab=99.80 E-value=2.5e-18 Score=159.85 Aligned_cols=181 Identities=13% Similarity=0.190 Sum_probs=113.4
Q ss_pred cccEEEEccEEEecCCCCceeeeeeEEEeCCEEEEecCChhhhhhhcCCCceEEeCCCCEeeccccccCccchhhhhhcc
Q 022028 18 SSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGI 97 (304)
Q Consensus 18 ~~~~li~~~~ii~~~~~~~~~~~~~I~I~~g~I~~i~~~~~~~~~~~~~~~~vID~~g~iv~PG~ID~H~Hl~~s~~~g~ 97 (304)
+.+++|+|++|++++ .. .+++|+|+||||++|++..+. +.+.++||++|++|+|||||+|+|+....+ +.
T Consensus 25 ~~~~li~n~~v~~~~---~~-~~~~V~I~~grI~~Ig~~~~~-----~~~~~vID~~G~~v~PGlID~H~H~~~~~~-~~ 94 (501)
T 2vm8_A 25 SDRLLIKGGKIVNDD---QS-FYADIYMEDGLIKQIGENLIV-----PGGVKTIEAHSRMVIPGGIDVHTRFQMPDQ-GM 94 (501)
T ss_dssp CCCEEEEEEEEECSS---CE-EEEEEEEETTEEEEEESSCCC-----CSSSCEEECTTCEEEECEEEEEECTTCEET-TE
T ss_pred cCCEEEEeeEEECCC---Cc-eEeeEEEECCEEEEeccCCCC-----CCCCeEEECCCCEEeeCEEEeeeccccccc-CC
Confidence 356899999999865 23 568999999999999975431 124589999999999999999999965321 10
Q ss_pred cCCCCccccccccccCccCCCChHHHHHHHHHHHHHHHhcCcceeecCCCC----CHHHHHHHHHHcCCe---EEeeccc
Q 022028 98 ADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQ----HVSEMAKAVELLGLR---ACLVQST 170 (304)
Q Consensus 98 ~~~~~~~~~l~~~~~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~d~~~~----~~~~~~~~~~~~gir---~~~~~~~ 170 (304)
.++++++. ...+++++||||++++... .....++...+.+.+ ...+..
T Consensus 95 --------------------~~~e~~~~----~~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~- 149 (501)
T 2vm8_A 95 --------------------TSADDFFQ----GTKAALAGGTTMIIDHVVPEPGTSLLAAFDQWREWADSKSCCDYSLH- 149 (501)
T ss_dssp --------------------ECSSCHHH----HHHHHHHTTEEEEEEEECCCTTSCHHHHHHHHHHHHHHHCSSEEEEE-
T ss_pred --------------------CcHHHHHH----HHHHHHhCCcEEEEeCCCCCCCCChHHHHHHHHHHHhcCCeeEEEEE-
Confidence 01223332 2347899999999986421 122223222222111 011110
Q ss_pred ccCCCCCCCCcccCChHHHHHHHHHHHHHHcCCCCCCeEEEEeeCcccCCCHHHHHHHHHHHHHhCCeeeEEecC
Q 022028 171 MDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAE 245 (304)
Q Consensus 171 ~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~e~l~~~~~~a~~~~~~~~~H~~E 245 (304)
..+++ + .....++.++++++ .+...+++++++......+++.++++++.|+++++++.+|+.+
T Consensus 150 -~~~~~----~----~~~~~~e~~~l~~~---~G~~~i~~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~e~ 212 (501)
T 2vm8_A 150 -VDISE----W----HKGIQEEMEALVKD---HGVNSFLVYMAFKDRFQLTDCQIYEVLSVIRDIGAIAQVHAEN 212 (501)
T ss_dssp -EECCS----C----SHHHHHHHHHHHHH---SCCCEEEEESSSTTTTBCCHHHHHHHHHHHHHHTCEEEEECCC
T ss_pred -EEecC----C----CcccHHHHHHHHHh---CCceEEEEeeccCCCCCCCHHHHHHHHHHHHHhCCEEEEEccC
Confidence 01111 1 11223344444433 2334566666555556789999999999999999999999743
|
| >2vun_A Enamidase; nicotinate degradation, binuclear metal center, amidohydrolases, stereospecificity, hydrolase; 1.89A {Eubacterium barkeri} | Back alignment and structure |
|---|
Probab=99.79 E-value=4.2e-19 Score=159.51 Aligned_cols=216 Identities=19% Similarity=0.142 Sum_probs=124.9
Q ss_pred cccEEEEccEE-EecCCCCceeeeeeEEEeCCEEEEecCChhhhhhhcCCC-ceEEeCCCCEeeccccccCccchhhhhh
Q 022028 18 SSTMILHNAVI-VTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMA-DQIIDLQSQILLPGFVNTHVHTSQQLAK 95 (304)
Q Consensus 18 ~~~~li~~~~i-i~~~~~~~~~~~~~I~I~~g~I~~i~~~~~~~~~~~~~~-~~vID~~g~iv~PG~ID~H~Hl~~s~~~ 95 (304)
|.+++|+|++| ++++....++.+++|+|+||||++|++..... +.+ .++||++|++|+|||||+|+|+...
T Consensus 1 m~~~li~n~~v~~~~~~~~~~~~~~~v~I~~g~I~~Ig~~~~~~----~~~~~~viD~~g~~v~PGlID~H~H~~~~--- 73 (386)
T 2vun_A 1 MSKTIIKNIGKIVSGDIKSPVLQADTIVVEDGLIAAIGGEELMK----DAGDATIIDAAGSTVTPGLLDTHVHVSGG--- 73 (386)
T ss_dssp -CEEEEESCSEEECSCTTSCEECCSEEEEETTEEEEEESGGGGT----TCTTCEEEECTTCEEEECEEEEEECCCST---
T ss_pred CccEEEeccEEEEcCCCCccccccceEEEECCEEEEecCccccC----CCCCceEEcCCCCEEccceeeccccccCC---
Confidence 35689999999 98764323467899999999999998743211 123 5899999999999999999999631
Q ss_pred cccCCCCccccccccccCccCCCChHHHHHHHHHHHHHHHhcCcceeecCC-----CCC--HHHHH--HHHHH---cCCe
Q 022028 96 GIADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAG-----GQH--VSEMA--KAVEL---LGLR 163 (304)
Q Consensus 96 g~~~~~~~~~~l~~~~~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~d~~-----~~~--~~~~~--~~~~~---~gir 163 (304)
.|.. +..+..++.+++++||||++++. ... ...+. +.... .+.+
T Consensus 74 ---------~~~~---------------~~~~~~~~~~~l~~GvTtv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (386)
T 2vun_A 74 ---------DYAP---------------RQKTMDFISSALHGGVTTMISAGSPHFPGRPKDAAGTKALAITLSKSYYNAR 129 (386)
T ss_dssp ---------TEEG---------------GGTEESHHHHHHTTTEEEEEECCCTTSTTCCCSHHHHHHHHHHHHHHHHHCC
T ss_pred ---------CcCh---------------hHHHHHHHHHHHhCCceEEEeccccccCCChhhHHHHHHHHHHhhccccccc
Confidence 2210 01111245678999999999965 111 21111 11111 1111
Q ss_pred EEeecccccCCCCCCCCcccCChHHHHHHHHHHHHHHcCCCCCCeEEEEeeCcccCCCHHHHHHHHHHHHHhCCeeeEEe
Q 022028 164 ACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHV 243 (304)
Q Consensus 164 ~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~e~l~~~~~~a~~~~~~~~~H~ 243 (304)
. +......| .+ .... ... .+..+++++ .+.+.++.... + ..++++.+++++++|+++|+++.+|+
T Consensus 130 ~--~~~~~~~g--~~-~~~~-~~~--~~~~~~~~~----~g~~~ik~~~~--~-~~~~~~~l~~~~~~a~~~g~~v~~H~ 194 (386)
T 2vun_A 130 P--AGVKVHGG--AV-ILEK-GLT--EEDFIEMKK----EGVWIVGEVGL--G-TIKNPEDAAPMVEWAHKHGFKVQMHT 194 (386)
T ss_dssp G--GGCEEECC--EE-CCCT-TCC--HHHHHHHHH----TTCCEEEEETS--S-SCCSHHHHHHHHHHHHHTTCEEEEEC
T ss_pred c--cceeeccC--cc-cccC-CcC--HHHHHHHHH----hCCCeEEEeec--C-CCCCHHHHHHHHHHHHHCCCeEEEec
Confidence 0 00000001 00 0000 011 122333332 23345664422 1 12588999999999999999999999
Q ss_pred cCChhhHHHHHHhcCCCCCHHHHHHHhCCCCCCeeEEEecc----CCcchhc
Q 022028 244 AEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVW----VNHTEVN 291 (304)
Q Consensus 244 ~E~~~~~~~~~~~~g~~~~~~~~l~~~g~l~~~~~~~H~~~----l~~~di~ 291 (304)
.|..... .+. ..++.+.+.|. + .+.||++ +++++++
T Consensus 195 ~~~~~~~------~~~--~~i~~~~~~G~---~-~i~H~~~~~~~~~~~~~~ 234 (386)
T 2vun_A 195 GGTSIPG------SST--VTADDVIKTKP---D-VVSHINGGPTAISVQEVD 234 (386)
T ss_dssp SCCSCST------TCS--CCHHHHHHHCC---S-EEETTTCSSSCCCHHHHH
T ss_pred CCccccc------cCH--HHHHHHHHcCC---C-EEEEccCCCCCCCHHHHH
Confidence 7542110 000 13444555665 3 5899988 7777665
|
| >2ftw_A Dihydropyrimidine amidohydrolase; (beta-alpha)8-barrel, beta-sandwich; HET: KCX; 2.05A {Dictyostelium discoideum} SCOP: b.92.1.3 c.1.9.6 | Back alignment and structure |
|---|
Probab=99.79 E-value=6.8e-19 Score=164.42 Aligned_cols=188 Identities=18% Similarity=0.236 Sum_probs=115.4
Q ss_pred cccEEEEccEEEecCCCCceeeeeeEEEeCCEEEEecCChhhhhhhcCCCceEEeCCCCEeeccccccCccchhhhhhcc
Q 022028 18 SSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGI 97 (304)
Q Consensus 18 ~~~~li~~~~ii~~~~~~~~~~~~~I~I~~g~I~~i~~~~~~~~~~~~~~~~vID~~g~iv~PG~ID~H~Hl~~s~~~g~ 97 (304)
+.+++|+|++|++.+ .. .+++|+|+||||++|++..+. +.+.++||++|++|+|||||+|+|+.....
T Consensus 7 ~~~~lI~n~~vv~~~---~~-~~~~V~I~dG~I~~Ig~~~~~-----~~~~~vIDa~G~~v~PGlID~H~H~~~~~~--- 74 (521)
T 2ftw_A 7 TGTILIKNGTVVNDD---RY-FKSDVLVENGIIKEISKNIEP-----KEGIKVVDATDKLLLPGGIDTHTHFQLPFM--- 74 (521)
T ss_dssp CCCEEEESCEEECSS---CE-EECEEEEETTEEEEEESCCCC-----CSSCCEEECTTCEEEECEEEEEECTTCEET---
T ss_pred cCCEEEECcEEECCC---Cc-eeeeEEEECCEEEEecCCCCC-----CCCCeEEECCCCEEecCEEeeecccCcCCC---
Confidence 456899999999854 23 478999999999999875421 124589999999999999999999965210
Q ss_pred cCCCCccccccccccCccCCCChHHHHHHHHHHHHHHHhcCcceeecCCCCC-HHHHHHHHHHcCCeEEeecccccCCCC
Q 022028 98 ADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQH-VSEMAKAVELLGLRACLVQSTMDCGEG 176 (304)
Q Consensus 98 ~~~~~~~~~l~~~~~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~d~~~~~-~~~~~~~~~~~gir~~~~~~~~d~g~~ 176 (304)
. ..++++++..+ ..++++||||++++.... ...+.+++...+.+.. .....+.+..
T Consensus 75 -------~-----------~~~~e~~~~~~----~~a~~~G~Ttv~d~~~~~~~~~~~~a~~~~~~~~~-~~~~~~~g~h 131 (521)
T 2ftw_A 75 -------G-----------TVSVDDFDIGT----QAAVAGGTTFIIDFVIPTRGQSLLEAYDQWKKWAD-EKVNCDYSLH 131 (521)
T ss_dssp -------T-----------EECSSCHHHHH----HHHHHTTEEEEEEEECCCTTCCHHHHHHHHHHHHH-TTCSSEEEEE
T ss_pred -------C-----------ccCHHHHHHHH----HHHHhCCcceecCcCCCCCCcCHHHHHHHHHHHhh-cCceeeEeeE
Confidence 0 01233444433 446789999999864211 1112222222211110 0000010000
Q ss_pred C-CCCcccCChHHHHHHHHHHHHHHcCCCCCCeEEEEeeCcccCCCHHHHHHHHHHHHHhCCeeeEEecCChh
Q 022028 177 L-PASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPY 248 (304)
Q Consensus 177 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~e~l~~~~~~a~~~~~~~~~H~~E~~~ 248 (304)
. .+.+ .....++..+++++ .+...++++++++..+.++++.++++++.|+++++++.+|+ |...
T Consensus 132 ~~~~~~----~~~~~~~l~~l~~~---~G~~~~k~~~~~~~~~~~~~e~l~~~~~~A~~~g~~v~vH~-e~~~ 196 (521)
T 2ftw_A 132 VAITWW----SEQVSREMEILVKE---RGVNSFKCFMAYKNSFMVTDQEMYHIFKRCKELGAIAQVHA-ENGD 196 (521)
T ss_dssp EECCSC----CHHHHHHHHHHHHH---SCCCEEEEESSCTTTTBCCHHHHHHHHHHHHHHTCEEEEEC-SCHH
T ss_pred EeecCC----ChhHHHHHHHHHHh---CCCCEEEEEeccCCCcCCCHHHHHHHHHHHHHcCCEEEEEc-CCHH
Confidence 0 0111 12333444455543 23356777777777778999999999999999999999997 5543
|
| >1gkp_A Hydantoinase; hydrolase, dihydropyrimidinase, cyclic amidase; HET: KCX EPE; 1.29A {Thermus SP} SCOP: b.92.1.3 c.1.9.6 PDB: 1gkq_A* | Back alignment and structure |
|---|
Probab=99.79 E-value=1e-18 Score=160.48 Aligned_cols=187 Identities=16% Similarity=0.238 Sum_probs=117.2
Q ss_pred EEEEccEEEecCCCCceeeeeeEEEeCCEEEEecCChhhhhhhcCCCceEEeCCCCEeeccccccCccchhhhhhcccCC
Q 022028 21 MILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIADD 100 (304)
Q Consensus 21 ~li~~~~ii~~~~~~~~~~~~~I~I~~g~I~~i~~~~~~~~~~~~~~~~vID~~g~iv~PG~ID~H~Hl~~s~~~g~~~~ 100 (304)
++|+|++|++++ .. .+++|+|+||||++|++..+. +.+.++||++|++|+|||||+|+|+..... +
T Consensus 2 ~li~n~~vv~~~---~~-~~~~v~I~~g~I~~ig~~~~~-----~~~~~viD~~G~~v~PGlID~H~H~~~~~~-~---- 67 (458)
T 1gkp_A 2 LLIKNGEIITAD---SR-YKADIYAEGETITRIGQNLEA-----PPGTEVIDATGKYVFPGFIDPHVHIYLPFM-A---- 67 (458)
T ss_dssp EEEESCEEEETT---EE-EECEEEESSSBCCEEESCCCC-----CTTCEEEECTTSEEEECEEEEEECSSCEET-T----
T ss_pred EEEEeeEEECCC---Cc-eEeeEEEECCEEEEecCCCCC-----CCCCeEEECCCCEEecCEEecccCCCcCCC-C----
Confidence 689999999865 22 578999999999999875421 124689999999999999999999965210 0
Q ss_pred CCccccccccccCccCCCChHHHHHHHHHHHHHHHhcCcceeecCCCC----CHHHHHHHHHHc-CCeEEeecccccCCC
Q 022028 101 VDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQ----HVSEMAKAVELL-GLRACLVQSTMDCGE 175 (304)
Q Consensus 101 ~~~~~~l~~~~~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~d~~~~----~~~~~~~~~~~~-gir~~~~~~~~d~g~ 175 (304)
..++++++..+ ..++++||||++++... .....++...+. .-+......+....+
T Consensus 68 ----------------~~~~~~~~~~~----~~~~~~GvTtv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 127 (458)
T 1gkp_A 68 ----------------TFAKDTHETGS----KAALMGGTTTYIEMCCPSRNDDALEGYQLWKSKAEGNSYCDYTFHMAVS 127 (458)
T ss_dssp ----------------EECSCCHHHHH----HHHHHTTEEEEEEEECCCTTSCHHHHHHHHHHHHTTTCSSEEEEEEECC
T ss_pred ----------------CcCHhHHHHHH----HHHHhCCccEEEeCCCCCCCCCHHHHHHHHHHHhccCceeeEEEEEeec
Confidence 01123333332 34578999999986421 222222222211 111110000000000
Q ss_pred CCCCCcccCChHHHHHHHHHHHHHHcCCCCCCeEEEEeeCcccCCCHHHHHHHHHHHHHhCCeeeEEecCChhhHHHHH
Q 022028 176 GLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVM 254 (304)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~e~l~~~~~~a~~~~~~~~~H~~E~~~~~~~~~ 254 (304)
.. .++.+++.+++++. +...+++.+.++....++++.+.++.+.|+++++++++|+ |+..+.+.+.
T Consensus 128 ----~~----~~~~~~~~~~~~~~----g~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~H~-e~~~~~~~~~ 193 (458)
T 1gkp_A 128 ----KF----DEKTEGQLREIVAD----GISSFKIFLSYKNFFGVDDGEMYQTLRLAKELGVIVTAHC-ENAELVGRLQ 193 (458)
T ss_dssp ----CC----CTTHHHHHHHHHHT----TCCEEEEEECSTTTTBCCHHHHHHHHHHHHHHTCEEEEEE-SCHHHHHHHH
T ss_pred ----CC----chhhHHHHHHHHHh----CCCEEEEEeccCCCcCCCHHHHHHHHHHHHhcCCEEEEEc-CCHHHHHHHH
Confidence 01 11233444455443 2345677777777678899999999999999999999998 7776665543
|
| >1e9y_B Urease subunit beta; hydrolase, dodecamer; HET: KCX; 3.00A {Helicobacter pylori} SCOP: b.92.1.1 c.1.9.2 PDB: 1e9z_B* 3qga_C* 3qgk_C* | Back alignment and structure |
|---|
Probab=99.78 E-value=2.6e-18 Score=161.14 Aligned_cols=165 Identities=19% Similarity=0.254 Sum_probs=111.7
Q ss_pred cccEEEEccEEEecCCCCceeeeeeEEEeCCEEEEecCChhhh-------hhhcCCCceEEeCCCCEeeccccccCccch
Q 022028 18 SSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADIL-------QQFSQMADQIIDLQSQILLPGFVNTHVHTS 90 (304)
Q Consensus 18 ~~~~li~~~~ii~~~~~~~~~~~~~I~I~~g~I~~i~~~~~~~-------~~~~~~~~~vID~~g~iv~PG~ID~H~Hl~ 90 (304)
..+++|+|++|++.. . +.+++|+|+||||++|++..++. ....+.+.++||++|++|+|||||+|+|+.
T Consensus 65 ~~dllI~n~~Vid~~---g-i~~~dI~I~dGrI~~IG~~~~~~~~~~~~~~~~~~~~~evIDa~G~iV~PGlID~HvHl~ 140 (569)
T 1e9y_B 65 ELDLIITNALIVDYT---G-IYKADIGIKDGKIAGIGKGGNKDMQDGVKNNLSVGPATEALAGEGLIVTAGGIDTHIHFI 140 (569)
T ss_dssp CCSEEEEEEEEEETT---E-EEEEEEEEETTEEEEEECCBCTTTSSSCCGGGBCCTTCEEEECTTCEEEECEEEEEEETT
T ss_pred cCCEEEEeeEEECCC---C-cEeeeEEEECCEEEEeecCCCccccccccccccCCCCCeEEECCCCEEecCEEEEeecCC
Confidence 446899999999843 3 46789999999999999764310 000122568999999999999999999984
Q ss_pred hhhhhcccCCCCccccccccccCccCCCChHHHHHHHHHHHHHHHhcCcceeecCCCC---------------CHHHHHH
Q 022028 91 QQLAKGIADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQ---------------HVSEMAK 155 (304)
Q Consensus 91 ~s~~~g~~~~~~~~~~l~~~~~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~d~~~~---------------~~~~~~~ 155 (304)
. +.. +.+++++||||+++++.. ..+.+.+
T Consensus 141 ~----------------------------p~~--------~~~al~~GvTTv~d~g~~p~~~t~~~~~~~g~~~l~~~~~ 184 (569)
T 1e9y_B 141 S----------------------------PQQ--------IPTAFASGVTTMIGGGTGPADGTNATTITPGRRNLKWMLR 184 (569)
T ss_dssp C----------------------------TTH--------HHHHHHTTEEEEEEECCSSCHHHHHCCCCCHHHHHHHHHH
T ss_pred C----------------------------cHH--------HHHHHhCCeeEEEcCCcCCCCCCcCcccCCcHHHHHHHHH
Confidence 2 101 356899999999997421 1233456
Q ss_pred HHHHcCCeEEeecccccCCCCCCCCcccCChHHHHHHHHHHHHHHcCCCCCCeEEEEeeCcccCCCHHHHHHHHHHHHHh
Q 022028 156 AVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREF 235 (304)
Q Consensus 156 ~~~~~gir~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~e~l~~~~~~a~~~ 235 (304)
+++..+++..+... + .. ... +..+++++. |. .++.++..+.++++.++++++.|+++
T Consensus 185 a~~~~~~~~~~~g~----g--~~-----~~~----~~l~e~~~~------Ga--~gik~~~~~~~t~e~l~~~l~~A~~~ 241 (569)
T 1e9y_B 185 AAEEYSMNLGFLAK----G--NA-----SND----ASLADQIEA------GA--IGFKIHEDWGTTPSAINHALDVADKY 241 (569)
T ss_dssp HHTTSSSEEEEEEE----C--CC-----SCH----HHHHHHHHT------TC--SEEEECGGGCCCHHHHHHHHHHHHHT
T ss_pred HhcccCceEEEECC----C--Cc-----CCH----HHHHHHHHc------CC--CEEEecCCCCCCHHHHHHHHHHHHHh
Confidence 66666777533211 1 10 011 223333331 22 24555666778999999999999999
Q ss_pred CCeeeEEecC
Q 022028 236 KTGIHMHVAE 245 (304)
Q Consensus 236 ~~~~~~H~~E 245 (304)
|+++.+|+.+
T Consensus 242 g~~V~iHa~~ 251 (569)
T 1e9y_B 242 DVQVAIHTDT 251 (569)
T ss_dssp TCEEEECCCT
T ss_pred CCEEEEEcCC
Confidence 9999999864
|
| >2ogj_A Dihydroorotase; TIM barrel, binuclear zinc, imidazole complex, amido hydrola 9244B, structural genomics, PSI-2; HET: KCX; 2.62A {Agrobacterium tumefaciens} | Back alignment and structure |
|---|
Probab=99.78 E-value=7.3e-19 Score=159.71 Aligned_cols=216 Identities=18% Similarity=0.174 Sum_probs=123.9
Q ss_pred CCcccEEEEccEEEecCCCCceeeeeeEEEe-CCEEEEecCChhhhhhhcCCCceEEeCCCCEeeccccccCccchhhhh
Q 022028 16 GSSSTMILHNAVIVTMDKESRVFRNGGVFVV-QDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLA 94 (304)
Q Consensus 16 ~~~~~~li~~~~ii~~~~~~~~~~~~~I~I~-~g~I~~i~~~~~~~~~~~~~~~~vID~~g~iv~PG~ID~H~Hl~~s~~ 94 (304)
+|+.+++|+|++|++++.. ....+++|+|+ ||||++|++..+. +.+.++||++|++|+|||||+|+|+..+..
T Consensus 12 ~~~~~~li~n~~vv~~~~~-~~~~~~~v~I~~~g~I~~Ig~~~~~-----~~~~~viD~~g~~v~PGlID~H~H~~~~~~ 85 (417)
T 2ogj_A 12 PLQAPILLTNVKPVGFGKG-ASQSSTDILIGGDGKIAAVGSALQA-----PADTQRIDAKGAFISPGWVDLHVHIWHGGT 85 (417)
T ss_dssp --CCCEEEEEEEECSSCTT-CCCSCEEEEECTTSBEEEEETTCCC-----SSCEEECCC--CEEEECEEEEEECCCBTTB
T ss_pred cCCCcEEEECCEEEcCCCC-ccCccceEEEecCCEEEEeccCCCC-----CCCCeEEECCCCEEccCeeecccccccccc
Confidence 3455789999999986531 14568899999 9999999875321 124589999999999999999999965321
Q ss_pred hcccCCCCccccccccccCccCCCChHHHHHHHHHHHHHHHhcCcceeecCCCC---CHHHHHHHH-HHc--CCeEEeec
Q 022028 95 KGIADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQ---HVSEMAKAV-ELL--GLRACLVQ 168 (304)
Q Consensus 95 ~g~~~~~~~~~~l~~~~~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~d~~~~---~~~~~~~~~-~~~--gir~~~~~ 168 (304)
+ .| .+++ ..++++||||++|+... ..+.+.+.. +.. +++.++..
T Consensus 86 ~---------~~-----------~~~~----------~~~l~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 135 (417)
T 2ogj_A 86 D---------IS-----------IRPS----------ECGAERGVTTLVDAGSAGEANFHGFREYIIEPSRERIKAFLNL 135 (417)
T ss_dssp S---------SC-----------CCGG----------GTSGGGTEEEEEEESSCCSTTHHHHHHHTTTTCSSEEEEEEES
T ss_pred c---------cC-----------CCHH----------HHHHhCCcCeEEeCCcCCCcCHHHHHHHHhhccccCeEEEecc
Confidence 1 00 1111 13689999999986532 222333321 211 23444432
Q ss_pred ccccCCCCC---CCCcccCChHHHHHHHHHHHHHHcCCCCCCeEEEEeeCcccCCCHHHHHHHHHHHHHhCCeeeEEecC
Q 022028 169 STMDCGEGL---PASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAE 245 (304)
Q Consensus 169 ~~~d~g~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~e~l~~~~~~a~~~~~~~~~H~~E 245 (304)
... |... ..+.... .....+..+++++.+... ...+++.+.+.....++.+.++++.++|+++++++.+|+.+
T Consensus 136 ~~~--G~~~~~~~~e~~~~-~~~~~~~~~~~~~~~~~~-~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~ 211 (417)
T 2ogj_A 136 GSI--GLVACNRVPELRDI-KDIDLDRILECYAENSEH-IVGLKVRASHVITGSWGVTPVKLGKKIAKILKVPMMVHVGE 211 (417)
T ss_dssp STT--TTTTTTTSCSCSSG-GGCCHHHHHHHHHTCTTT-EEEEEEEESHHHHTTCTTHHHHHHHHHHHHHTCCEEEEECS
T ss_pred ccC--cCCCCCCcccccch-hhcCHHHHHHHHHhCCCc-eEEEEEEecCCccccccHHHHHHHHHHHHHcCCcEEEEcCC
Confidence 111 1100 0011000 000122344455543321 11255555654445678888888999999999999999977
Q ss_pred ChhhHHHHHHhcCCCCCHHHHHHHhCCCCCCeeEEEeccCCc
Q 022028 246 IPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNH 287 (304)
Q Consensus 246 ~~~~~~~~~~~~g~~~~~~~~l~~~g~l~~~~~~~H~~~l~~ 287 (304)
+....+... +++.++.++.||++..+
T Consensus 212 ~~~~~~~~~----------------~~l~~g~~~~H~~~~~~ 237 (417)
T 2ogj_A 212 PPALYDEVL----------------EILGPGDVVTHCFNGKS 237 (417)
T ss_dssp SSSCHHHHH----------------HHCCTTCEEETTTCCCT
T ss_pred CcccHHHHH----------------HHhcCCCEEEeccCCCc
Confidence 543222211 12333467889888544
|
| >1gkr_A Hydantoinase, non-ATP dependent L-selective hydantoinase; hydrolase, dihydropyrimidinase, cyclic amidase; HET: KCX; 2.60A {Arthrobacter aurescens} SCOP: b.92.1.3 c.1.9.6 | Back alignment and structure |
|---|
Probab=99.77 E-value=1.5e-17 Score=152.72 Aligned_cols=178 Identities=16% Similarity=0.137 Sum_probs=113.2
Q ss_pred ccEEEEccEEEecCCCCceeeeeeEEEeCCEEEEecCChhhhhhhcCCCceEEeCCCCEeeccccccCccchhhhhhccc
Q 022028 19 STMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIA 98 (304)
Q Consensus 19 ~~~li~~~~ii~~~~~~~~~~~~~I~I~~g~I~~i~~~~~~~~~~~~~~~~vID~~g~iv~PG~ID~H~Hl~~s~~~g~~ 98 (304)
.+++|+|++|++++ .. .+++|+|+||||++|++..+. +.+.++||++|++|+|||||+|+|+....
T Consensus 2 ~~~li~~~~v~~~~---~~-~~~~v~I~~g~I~~ig~~~~~-----~~~~~viD~~g~~v~PGlID~H~H~~~~~----- 67 (458)
T 1gkr_A 2 FDVIVKNCRLVSSD---GI-TEADILVKDGKVAAISADTSD-----VEASRTIDAGGKFVMPGVVDEHVHIIDMD----- 67 (458)
T ss_dssp EEEEEEEEEEEETT---EE-EEEEEEEETTEEEEEESCCTT-----CCEEEEEECTTCEEEECEEEEEEECCCGG-----
T ss_pred ceEEEECcEEECCC---Cc-eeeeEEEECCEEEEecCCCCC-----CCCCeEEeCCCCEEecCEEEeeecccCCC-----
Confidence 46889999999865 23 688999999999999875421 12457999999999999999999996421
Q ss_pred CCCCccccccccccCccCCCChHHHHHHHHHHHHHHHhcCcceeecCC-CCC-----H---HHHHHHHHHcCCeEEeecc
Q 022028 99 DDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAG-GQH-----V---SEMAKAVELLGLRACLVQS 169 (304)
Q Consensus 99 ~~~~~~~~l~~~~~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~d~~-~~~-----~---~~~~~~~~~~gir~~~~~~ 169 (304)
.+ .++++++. ....++++||||++++. ... . ....+.+...+++......
T Consensus 68 ---~~--------------~~~~~~~~----~~~~~~~~GvTtv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 126 (458)
T 1gkr_A 68 ---LK--------------NRYGRFEL----DSESAAVGGITTIIEMPITFPPTTTLDAFLEKKKQAGQRLKVDFALYGG 126 (458)
T ss_dssp ---GT--------------TTSCCHHH----HHHHHHHHTEEEEEECSCSSSCSCSHHHHHHHHHHHHHHCSSEEEEEEE
T ss_pred ---CC--------------CchhHHHH----HHHHHHcCCEEEEEeCCCCCCCCCCcHHHHHHHHHHhhhCceeEEEEec
Confidence 00 01122222 23456789999999976 221 1 2223333333332211100
Q ss_pred cccCCCCCCCCcccCChHHHHHHHHHHHHHHcCCCCCCeEEEEeeCc---ccCCCHHHHHHHHHHHHHhCCeeeEEecCC
Q 022028 170 TMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQ---IMNATDRLLLETRDMAREFKTGIHMHVAEI 246 (304)
Q Consensus 170 ~~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~---~~~~~~e~l~~~~~~a~~~~~~~~~H~~E~ 246 (304)
. .+ .. +++.+++++. +...++++++++. .+.++++.++++++.|+++++++.+|+ |.
T Consensus 127 ~-------~~----~~----~~~~~~~~~~----g~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~-~~ 186 (458)
T 1gkr_A 127 G-------VP----GN----LPEIRKMHDA----GAVGFKSMMAASVPGMFDAVSDGELFEIFQEIAACGSVIVVHA-EN 186 (458)
T ss_dssp C-------CT----TC----HHHHHHHHHT----TCCEEEEESSCSBTTTBCBCCHHHHHHHHHHHHHHTCEEEEEC-CC
T ss_pred c-------CC----CC----HHHHHHHHHc----CCcEEEEeecccCCCCcccCCHHHHHHHHHHHHHcCCEEEEEC-CC
Confidence 0 00 01 2233444432 2345666666653 357899999999999999999999998 55
Q ss_pred hhhHH
Q 022028 247 PYENQ 251 (304)
Q Consensus 247 ~~~~~ 251 (304)
....+
T Consensus 187 ~~~~~ 191 (458)
T 1gkr_A 187 ETIIQ 191 (458)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 54443
|
| >3dc8_A Dihydropyrimidinase; TIM-barrel, hydrolase; HET: KCX; 1.85A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.77 E-value=1.4e-17 Score=154.02 Aligned_cols=182 Identities=15% Similarity=0.142 Sum_probs=116.1
Q ss_pred cEEEEccEEEecCCCCceeeeeeEEEeCCEEEEecCChhhhhhhcCCCceEEeCCCCEeeccccccCccchhhhhhcccC
Q 022028 20 TMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIAD 99 (304)
Q Consensus 20 ~~li~~~~ii~~~~~~~~~~~~~I~I~~g~I~~i~~~~~~~~~~~~~~~~vID~~g~iv~PG~ID~H~Hl~~s~~~g~~~ 99 (304)
+++|+|++|++++. . .+++|+|+||||++|++..+ +.++||++|++|+|||||+|+|+.....
T Consensus 2 ~~~i~~~~v~~~~~---~-~~~~v~I~~G~I~~i~~~~~--------~~~viD~~g~~v~PG~ID~H~H~~~~~~----- 64 (490)
T 3dc8_A 2 STVIKGGTIVTADL---T-YKADVKVEGGRIVEIGPNLS--------GAETLDATGCYVMPGGIDPHTHLEMPFM----- 64 (490)
T ss_dssp CEEEESCEEECSSC---E-EECEEEEETTEEEEEESSCC--------CSEEEECTTCEEEECEEEEEECTTCEET-----
T ss_pred cEEEEccEEECCCC---c-eeeeEEEECCEEEEeccCCC--------CCeEEECCCCEEecCEEeeccccCCCCC-----
Confidence 47899999998652 2 57899999999999987542 4689999999999999999999965221
Q ss_pred CCCccccccccccCccCCCChHHHHHHHHHHHHHHHhcCcceeecCCCC----CHHHHHHHHHHcCCeEEeecccccCCC
Q 022028 100 DVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQ----HVSEMAKAVELLGLRACLVQSTMDCGE 175 (304)
Q Consensus 100 ~~~~~~~l~~~~~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~d~~~~----~~~~~~~~~~~~gir~~~~~~~~d~g~ 175 (304)
. ..++++++..+ ..++.+||||++++... .....++.......+..+...+..
T Consensus 65 -----~-----------~~~~e~~~~~~----~aa~~~GvTtv~~~~~~~p~~~~~~~~~~~~~~a~~~~~d~~~~~--- 121 (490)
T 3dc8_A 65 -----G-----------TYSSDDFESGT----RAALAGGTTMVVDFALPSPGQSLLEALTMWDNKSTRANCDYSFHM--- 121 (490)
T ss_dssp -----T-----------EECSCCHHHHH----HHHHHTTEEEEEEEECCC-CCCHHHHHHHHHHHTTTCSSEEEEEE---
T ss_pred -----C-----------CCCHHHHHHHH----HHHHHcCEEeecccCCCCCCcCHHHHHHHHHHHhhcccceeeeEE---
Confidence 0 01233444333 34578999999986422 122333333222212111000000
Q ss_pred CCCCCcccCChHHHHHHHHHHHHHHcCCCCCCeEEEEeeCcccCCCHHHHHHHHHHHHHhCCeeeEEecCChhhH
Q 022028 176 GLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYEN 250 (304)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~e~l~~~~~~a~~~~~~~~~H~~E~~~~~ 250 (304)
++. . ...+.+++..+++++ .+...++.++++.....++++.+.++++.|+++|.++.+| +|.....
T Consensus 122 ~~~-~----~~~~~l~el~~l~~~---~G~~~~k~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H-aE~~~~i 187 (490)
T 3dc8_A 122 AIT-W----WGEQVFNEMETIVKD---KGINTFKHFMAYKGALMVDDDEMFSSFQRCAALGALPLVH-AENGDVV 187 (490)
T ss_dssp ECC-S----CSHHHHHHHHHHHHH---SCCCEEEEESCSTTTTBCCHHHHHHHHHHHHHHTCEEEEE-CSCHHHH
T ss_pred EEe-c----CcHHHHHHHHHHHHh---CCCCEEEEEecCCCCccCCHHHHHHHHHHHHhcCCEEEEe-cCChHHH
Confidence 000 0 122334444454422 2334567777777777789999999999999999999999 6776544
|
| >1rk6_A D-aminoacylase; TIM barrel, beta barrel, insertion, hydrolase; 1.43A {Alcaligenes faecalis} SCOP: b.92.1.6 b.92.1.6 c.1.9.11 PDB: 1rjp_A 1v51_A 1rjq_A 1rjr_A 1rk5_A 1v4y_A 1m7j_A | Back alignment and structure |
|---|
Probab=99.77 E-value=1.5e-18 Score=161.26 Aligned_cols=203 Identities=19% Similarity=0.176 Sum_probs=115.7
Q ss_pred ccEEEEccEEEecCCCCceeeeeeEEEeCCEEEEecCChhhhhhhcCCCceEEeCCCCEeeccccccCccchhhhhhccc
Q 022028 19 STMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIA 98 (304)
Q Consensus 19 ~~~li~~~~ii~~~~~~~~~~~~~I~I~~g~I~~i~~~~~~~~~~~~~~~~vID~~g~iv~PG~ID~H~Hl~~s~~~g~~ 98 (304)
.+++|+|++|++++. ....+++|+|+||||++|++..+ ..+.++||++|++|+|||||+|+|+..+..++..
T Consensus 21 ~~~~i~~~~v~~~~~--~~~~~~~v~i~~g~I~~i~~~~~------~~~~~~iD~~g~~v~PG~iD~H~H~~~~~~~~~~ 92 (496)
T 1rk6_A 21 FDYILSGGTVIDGTN--APGRLADVGVRGDRIAAVGDLSA------SSARRRIDVAGKVVSPGFIDSHTHDDNYLLKHRD 92 (496)
T ss_dssp BSEEEESSEECCSSS--CCCEECEEEEETTEEEEEECCTT------SCBSCEEECTTCEEEECEEESSCCCTTHHHHCTT
T ss_pred ccEEEECCEEEeCCC--CceeccEEEEECCEEEEecCCCC------CCCCeEEeCCCCEEecCEeeeeecCCccccccHH
Confidence 368999999998653 34568899999999999987532 1245799999999999999999999876544311
Q ss_pred C-------------------CCCcc-ccccccccCccCCCChHHHHHHHHHHHHHHHhcCcceeecCC------------
Q 022028 99 D-------------------DVDLM-TWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAG------------ 146 (304)
Q Consensus 99 ~-------------------~~~~~-~~l~~~~~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~d~~------------ 146 (304)
. ..++. +|+.+.+ +... .+++++..+.....++++.|.+++....
T Consensus 93 ~~~~~~~G~Tt~~~~~~g~~~~p~~~~~l~~~i-~~~~--~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~g~~~~~~~~~ 169 (496)
T 1rk6_A 93 MTPKISQGVTTVVTGNCGISLAPLAHANPPAPL-DLLD--EGGSFRFARFSDYLEALRAAPPAVNAACMVGHSTLRAAVM 169 (496)
T ss_dssp CHHHHTTTEEEEEESCTTCCSCSEECSSCCTTG-GGGC--SSSCCEESSHHHHHHHHHHSCCSSEEEEEEEHHHHHHHHC
T ss_pred HHHHHcCCeEEEEeCCCCCCCCCCChHHHHHhh-cccC--cccccCccCHHHHHHHHhccCCccceEEecccccceeeec
Confidence 0 11222 2544433 2111 1222233444555667777665542210
Q ss_pred ---C--CC---HH---HHHHHHHHcCCeEEeecccccCCCCCCCCcccCChHHHHHHHHHHHHHHcCCCCCCeEEEEeeC
Q 022028 147 ---G--QH---VS---EMAKAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIR 215 (304)
Q Consensus 147 ---~--~~---~~---~~~~~~~~~gir~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 215 (304)
. .. .. .+.+.+.+.|.+.+...... ++. .....++..+.. +...++ + ..+.+.+.
T Consensus 170 ~~~~~~~~~~~~~~~~~l~~~~~~~G~~~~~~~~~~------~~~-~~~~~~el~~~~-~~a~~~-----g-~~v~~H~~ 235 (496)
T 1rk6_A 170 PDLRREATADEIQAMQALADDALASGAIGISTGAFY------PPA-AHASTEEIIEVC-RPLITH-----G-GVYATHMR 235 (496)
T ss_dssp SCCSSCCCHHHHHHHHHHHHHHHHHTCCEEEEETTS------GGG-TTCCHHHHHHHH-THHHHH-----T-CEEEEECS
T ss_pred cccccCCCHHHHHHHHHHHHHHHHcCCcEEeecccc------CCC-CCCCHHHHHHHH-HHHHHc-----C-CEEEEEeC
Confidence 0 01 11 22333335677664321111 010 011222332222 222222 1 22334443
Q ss_pred cccCCCHHHHHHHHHHHHHhCCeeeE-EecCC
Q 022028 216 QIMNATDRLLLETRDMAREFKTGIHM-HVAEI 246 (304)
Q Consensus 216 ~~~~~~~e~l~~~~~~a~~~~~~~~~-H~~E~ 246 (304)
....+..+.++++.++|++.|.++++ |+.+.
T Consensus 236 ~~~~~~~~~l~~~~~~a~~~g~~v~i~H~~~~ 267 (496)
T 1rk6_A 236 DEGEHIVQALEETFRIGRELDVPVVISHHKVM 267 (496)
T ss_dssp CSSTTHHHHHHHHHHHHHHHTSCEEECSCCCC
T ss_pred CCcccHHHHHHHHHHHHHHcCCeEEEEEEecc
Confidence 44566778888899999999999888 98775
|
| >3sfw_A Dihydropyrimidinase; hydrolase, zinc binding; HET: KCX; 1.73A {Brevibacillus agri} PDB: 1yny_A 1k1d_A* | Back alignment and structure |
|---|
Probab=99.77 E-value=4.1e-18 Score=156.80 Aligned_cols=184 Identities=16% Similarity=0.218 Sum_probs=114.2
Q ss_pred cEEEEccEEEecCCCCceeeeeeEEEeCCEEEEecCChhhhhhhcCCCceEEeCCCCEeeccccccCccchhhhhhcccC
Q 022028 20 TMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIAD 99 (304)
Q Consensus 20 ~~li~~~~ii~~~~~~~~~~~~~I~I~~g~I~~i~~~~~~~~~~~~~~~~vID~~g~iv~PG~ID~H~Hl~~s~~~g~~~ 99 (304)
.++|+|++|++.+ .. .+++|+|+||||++|++..+ +.+.++||++|++|+|||||+|+|+.....
T Consensus 2 ~~~i~n~~v~~~~---~~-~~~~v~i~~g~I~~i~~~~~------~~~~~viD~~g~~v~PG~ID~H~H~~~~~~----- 66 (461)
T 3sfw_A 2 KKWIRNGTVVTAS---DT-YQADVLIDGEKVVAIGSDLQ------ATDAEVIDATGYYLLPGGIDPHTHLDMPFG----- 66 (461)
T ss_dssp EEEEESCEEECSS---CE-EECEEEEETTEEEEEESCCC------CSSCEEEECTTCEEEECEEEEEECTTCEET-----
T ss_pred cEEEECeEEECCC---Cc-EEEEEEEECCEEEEEeCCCC------CCCCeEEECCCCEEEeeeEEeEeccCcCCC-----
Confidence 4789999999854 23 57899999999999998653 135789999999999999999999965210
Q ss_pred CCCccccccccccCccCCCChHHHHHHHHHHHHHHHhcCcceeecCCCC----CHHHHHHHH-HHcCCeEEeecccccCC
Q 022028 100 DVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQ----HVSEMAKAV-ELLGLRACLVQSTMDCG 174 (304)
Q Consensus 100 ~~~~~~~l~~~~~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~d~~~~----~~~~~~~~~-~~~gir~~~~~~~~d~g 174 (304)
.+ ...++++. ....++.+||||++++... .....++.. ....-+......+. +
T Consensus 67 -----~~-----------~~~e~~~~----~~~~~~~~GvTt~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~--~ 124 (461)
T 3sfw_A 67 -----GT-----------VTSDNFFT----GTKAAAFGGTTSIVDFCLTSKGESLHSAIATWHEKARGKAVIDYGFH--L 124 (461)
T ss_dssp -----TE-----------ECSCCHHH----HHHHHHHTTEEEEEEEECCCTTSCHHHHHHHHHHHHTTTCSSEEEEE--E
T ss_pred -----Cc-----------ccHhHHHH----HHHHHHhCCEEEEEccCCCCCcchHHHHHHHHHHHhhcCcEEEEEEE--E
Confidence 00 11223332 2344689999999986431 122222221 11111110000000 0
Q ss_pred CCCCCCcccCChHHHHHHHHHHHHHHcCCCCCCeEEEEeeCcccCCCHHHHHHHHHHHHHhCCeeeEEecCChhhH
Q 022028 175 EGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYEN 250 (304)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~e~l~~~~~~a~~~~~~~~~H~~E~~~~~ 250 (304)
.+. ....+.+++.++++++ .+...++.++...+...++++.+.++++.|+++|+++.+| +|.....
T Consensus 125 -~~~-----~~~~~~~~~~~~l~~~---~G~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H-ae~~~~~ 190 (461)
T 3sfw_A 125 -MVS-----DANDHVLEELESVVNN---EGITSLKVFMAYKNVLMADDETLFKTLIRAKELGALVQVH-AENGDVL 190 (461)
T ss_dssp -ECS-----CCCHHHHHHHHHHHHT---SCCCEEEEESSSTTTTBCCHHHHHHHHHHHHHHTCEEEEE-CSCHHHH
T ss_pred -EEe-----CCCHHHHHHHHHHHHh---CCCCEEEEEEecCCCcccCHHHHHHHHHHHHhcCCEEEEE-cCCHHHH
Confidence 000 0123444555555542 2334566666665556789999999999999999999999 5665443
|
| >3icj_A Uncharacterized metal-dependent hydrolase; structural genomics, amidohydrolase, PSI-2, protein structur initiative; HET: KCX; 1.95A {Pyrococcus furiosus} PDB: 3etk_A* 3igh_X* | Back alignment and structure |
|---|
Probab=99.77 E-value=9.4e-18 Score=156.39 Aligned_cols=237 Identities=16% Similarity=0.183 Sum_probs=140.6
Q ss_pred cEEEEccEEEecCCCCceeeeeeEEEeCCEEEEecCChhhhhhhcCCCceEEeCCCCEeeccccccCccchhhhhhc---
Q 022028 20 TMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKG--- 96 (304)
Q Consensus 20 ~~li~~~~ii~~~~~~~~~~~~~I~I~~g~I~~i~~~~~~~~~~~~~~~~vID~~g~iv~PG~ID~H~Hl~~s~~~g--- 96 (304)
+++|+|++|+++++. .....+|.|+||||++|++..+......+.+.++||++|++|+|||||+|+|+.......
T Consensus 37 ~~li~ng~I~t~~~~--~~~~~~v~v~~g~I~~vg~~~~~~~~~~~~~~~viD~~G~~v~PGfiD~H~H~~~~g~~~~~~ 114 (534)
T 3icj_A 37 MKALINGTIYTSFSP--VKKVSGLVISNERVLYAGDSSTALRIAELAGGEIIDLKGKFVMPAFFDSHLHLDELGMSLEMV 114 (534)
T ss_dssp EEEEESSEEEEEETT--EEEESEEEEETTEEEEEECHHHHHHHHHHHTCEEEECTTCEEEECEEEEEECHHHHHHHHHSE
T ss_pred CEEEECCEEECCCCC--CceeeEEEEECCEEEEEcChHHHHhhccCCCCEEEECCCCEEecCEeehhhhhhhhhhhcCcc
Confidence 378999999998753 224679999999999999876532211012568999999999999999999986533210
Q ss_pred -ccCCCCccc-----------cccccccCc--------------------------------------------------
Q 022028 97 -IADDVDLMT-----------WLHDRIWPY-------------------------------------------------- 114 (304)
Q Consensus 97 -~~~~~~~~~-----------~l~~~~~~~-------------------------------------------------- 114 (304)
+....++.+ |+....|..
T Consensus 115 dl~~~~s~~e~~~~l~~~~~~wi~g~G~~~~~~~~~pt~~~LD~~~~Pv~l~~~~~H~~~~Ns~AL~~~gi~~t~~p~G~ 194 (534)
T 3icj_A 115 DLRGVKSMEELVERVKKGRGRIIFGFGWDQDELGRWPTREDLDVIDRPVFLYRRCFHVAVMNSKMIDLLNLKPSKDFDES 194 (534)
T ss_dssp ECTTCCSHHHHHHHHHTCCSSSEEEEEECHHHHSSCCCHHHHTTSSSCEEEEETTSSEEEECHHHHHHHCCCCCTTEETT
T ss_pred CCCCCCCHHHHHHHHHHHHhhCEEEcccCHHHhcCCCCHHHHhhCCCeEEEEecCCcHhHHhHHHHHHcCCCCCCCCCCC
Confidence 000000000 111100000
Q ss_pred ---------------cCC-C-ChHHHHHHHHHHHHHHHhcCcceeecCCCC--CHHHHHHHHH--HcCCeEEeecccccC
Q 022028 115 ---------------ESN-M-TEEDSYISTLLCGIELIHSGVTCFAEAGGQ--HVSEMAKAVE--LLGLRACLVQSTMDC 173 (304)
Q Consensus 115 ---------------~~~-~-~~e~~~~~~~~~~~~~l~~GvTtv~d~~~~--~~~~~~~~~~--~~gir~~~~~~~~d~ 173 (304)
... . ++++.....+.+..++++.|+|++.|.... ..+...+..+ ++.+|.+.....
T Consensus 195 tG~l~e~A~~~v~~~~p~~~l~~~~~~~~l~~a~~~~~~~GiTsv~d~~~~~~~~~~~~~l~~~g~l~~rv~~~~~~--- 271 (534)
T 3icj_A 195 TGIVRERALEESRKIINEKILTVKDYKHYIESAQEHLLSLGVHSVGFMSVGEKALKALFELEREGRLKMNVFAYLSP--- 271 (534)
T ss_dssp TTEEEHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTTEEEEEEEEECHHHHHHHHHHHHTTCCCSEEEEEECG---
T ss_pred CceeeHHHHHHHHHhccccCCCHHHHHHHHHHHHHHHHhCCCEEEEeCCCCHHHHHHHHHHHhCCCCcEEEEEecCH---
Confidence 000 2 566667777788899999999999987522 1112222222 245666432110
Q ss_pred CCCCCCCcccCChHHHHHHHHHHHHHHcCCCCCCeE-----EEEe-------------------eCcccCCCHHHHHHHH
Q 022028 174 GEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIR-----IWFG-------------------IRQIMNATDRLLLETR 229 (304)
Q Consensus 174 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~-----~~~~-------------------~~~~~~~~~e~l~~~~ 229 (304)
+.++...+... ...++++++ ++.. ..+...++++.+++++
T Consensus 272 --------------~~~~~~~~~~~--~~~~~~~~~~~gvK~~~DG~~~~~tA~l~~pY~d~~~~~g~~~~~~e~l~~~v 335 (534)
T 3icj_A 272 --------------ELLDKLEELNL--GKFEGRRLRIWGVKLFVDGSLGARTALLSEPYTDNPTTSGELVMNKDEIVEVI 335 (534)
T ss_dssp --------------GGHHHHHHHTC--CSEECSSEEEEEEEEESCCCTTTTCSCCSSCBTTBTTCCCCCSSCHHHHHHHH
T ss_pred --------------HHHHHHHHhcc--ccCCCCcEEEEeEEEEEeCCCCccchhhcCCccCCCCCCCcccCCHHHHHHHH
Confidence 00111111100 011122322 2211 0123457999999999
Q ss_pred HHHHHhCCeeeEEecCChhhHHHHHHhcCCCCCHHHHHHHhCCCCCCeeEEEeccCCcchhc
Q 022028 230 DMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEVN 291 (304)
Q Consensus 230 ~~a~~~~~~~~~H~~E~~~~~~~~~~~~g~~~~~~~~l~~~g~l~~~~~~~H~~~l~~~di~ 291 (304)
+.|+++|.++++|+.+. ...+. .++.+.+.+ .+..+.||.++++++++
T Consensus 336 ~~A~~~G~~v~~Ha~gd-~ai~~----------~l~a~~~~~---~r~~ieH~~~~~~e~i~ 383 (534)
T 3icj_A 336 ERAKPLGLDVAVHAIGD-KAVDV----------ALDAFEEAE---FSGRIEHASLVRDDQLE 383 (534)
T ss_dssp HHHTTTTCEEEEEECSH-HHHHH----------HHHHHHHHT---CCCEEEECCBCCHHHHH
T ss_pred HHHHHCCCEEEEEEcCh-HHHHH----------HHHHHHhcc---CCCEEEECCCCCHHHHH
Confidence 99999999999998743 33433 334444444 68899999999999998
|
| >1xrt_A Dihydroorotase, dhoase; amidohydrolase, metalloenzyme, pyrimidine; 1.61A {Aquifex aeolicus} SCOP: b.92.1.3 c.1.9.6 PDB: 1xrf_A 3d6n_A* | Back alignment and structure |
|---|
Probab=99.76 E-value=4.8e-18 Score=156.59 Aligned_cols=174 Identities=18% Similarity=0.211 Sum_probs=114.5
Q ss_pred cEEEEccEEEecCCCCceeeeeeEEEeCCEEEEecCChhhhhhhcCCCceEEeCCCCEeeccccccCccchhhhhhcccC
Q 022028 20 TMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIAD 99 (304)
Q Consensus 20 ~~li~~~~ii~~~~~~~~~~~~~I~I~~g~I~~i~~~~~~~~~~~~~~~~vID~~g~iv~PG~ID~H~Hl~~s~~~g~~~ 99 (304)
+++|+|++|++.+ ..++.+++|+|+||||++|++..+ + .+.++||++|++|+|||||+|+|+.....
T Consensus 48 ~~~i~~~~v~~~~--~~~~~~~~v~i~~g~I~~i~~~~~-----~-~~~~~iD~~g~~v~PGlID~H~H~~~~~~----- 114 (467)
T 1xrt_A 48 KLIVKNGYVIDPS--QNLEGEFDILVENGKIKKIDKNIL-----V-PEAEIIDAKGLIVCPGFIDIHVHLRDPGQ----- 114 (467)
T ss_dssp EEEEESCEEEEGG--GTEEEECEEEEETTEEEEEESSCC-----C-SSEEEEECTTSEEEECEEEEEECCCTTTC-----
T ss_pred eEEEEeeEEECCC--CCceecceEEEECCEEEEecCCCC-----C-CCCcEEeCCCCEEccCEEEEeecccCCCC-----
Confidence 4789999999865 235678999999999999987532 1 24589999999999999999999964210
Q ss_pred CCCccccccccccCccCCCChHHHHHHHHHHHHHHHhcCcceeecCCCC--------CHHHHHHHHHHcC-CeEEeeccc
Q 022028 100 DVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQ--------HVSEMAKAVELLG-LRACLVQST 170 (304)
Q Consensus 100 ~~~~~~~l~~~~~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~d~~~~--------~~~~~~~~~~~~g-ir~~~~~~~ 170 (304)
.| .++++. ....++++||||++++... ..+...+.++..| +|.+....+
T Consensus 115 -----~~-------------~~~~~~----~~~~~~~~GvTtv~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~ 172 (467)
T 1xrt_A 115 -----TY-------------KEDIES----GSRCAVAGGFTTIVCMPNTNPPIDNTTVVNYILQKSKSVGLCRVLPTGTI 172 (467)
T ss_dssp -----TT-------------TCCHHH----HHHHHHHTTEEEEEECSCSSSCSCSHHHHHHHHHHHHHHCSSEEEECBCS
T ss_pred -----Cc-------------hhhHHH----HHHHHHhCCeEEEEecCCCCCCCChHHHHHHHHHHhcccCcceEEEEeee
Confidence 11 112222 2345789999999997632 1244566667777 776443221
Q ss_pred ccCCCCCCCCcccCChHHHHHHHHHHHHHHcCCCCCCeEEEEeeCcccCCCHHHHHHHHHHHHHhCCeeeEEecCCh
Q 022028 171 MDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIP 247 (304)
Q Consensus 171 ~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~e~l~~~~~~a~~~~~~~~~H~~E~~ 247 (304)
.. + .... .. ++.+++++. +. ..+.+++...++++.+++++++|+++|+++.+|+.+..
T Consensus 173 ~~-~--~~~~----~~----~~~~~l~~~------g~--~~i~~~~~~~~~~e~l~~~~~~A~~~g~~v~~H~~~~~ 230 (467)
T 1xrt_A 173 TK-G--RKGK----EI----ADFYSLKEA------GC--VAFTDDGSPVMDSSVMRKALELASQLGVPIMDHCEDDK 230 (467)
T ss_dssp BG-G--GCSS----SB----CCHHHHHHH------TC--CCBCCTTSCCCCHHHHHHHHHHHHHHTCEEEECCCGGG
T ss_pred cC-C--CCcc----cH----HHHHHHHHc------CC--EEEEcCCCCCCCHHHHHHHHHHHHhcCCEEEEECCCHH
Confidence 11 1 0001 11 112233321 11 12344555678999999999999999999999997754
|
| >2ics_A Adenine deaminase; TIM barrel, binuclear zinc, adenine complex, amidohydrolase, structural genomics, PSI, protein structure initiative; HET: KCX ADE; 2.30A {Enterococcus faecalis} SCOP: b.92.1.8 c.1.9.14 | Back alignment and structure |
|---|
Probab=99.74 E-value=5.5e-18 Score=151.74 Aligned_cols=185 Identities=15% Similarity=0.152 Sum_probs=114.2
Q ss_pred ccEEEEccEEEecCCCCceeeeeeEEEeCCEEEEecCChhhhhhhcCCCceEEeCCC-CEeeccccccCccchhhhhhcc
Q 022028 19 STMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQS-QILLPGFVNTHVHTSQQLAKGI 97 (304)
Q Consensus 19 ~~~li~~~~ii~~~~~~~~~~~~~I~I~~g~I~~i~~~~~~~~~~~~~~~~vID~~g-~iv~PG~ID~H~Hl~~s~~~g~ 97 (304)
.+++|+|++|++.+ +++|+|+||||++|++..+ ..+.++||++| ++|+|||||+|+|+.....
T Consensus 5 ~~~~i~~~~v~~~~-------~~~v~i~~g~I~~ig~~~~------~~~~~~iD~~g~~~v~PG~ID~H~H~~~~~~--- 68 (379)
T 2ics_A 5 YDLLIKNGQTVNGM-------PVEIAIKEKKIAAVAATIS------GSAKETIHLEPGTYVSAGWIDDHVHCFEKMA--- 68 (379)
T ss_dssp EEEEEEEEECTTSC-------EEEEEEETTEEEEEESCCC------CCEEEEEECCTTCEEEECEEEEEECCCTTSS---
T ss_pred ccEEEECCEEEcCC-------cceEEEECCEEEEecCCCC------CCCCcEEeCCCCEEEccCEEEeccccCccCc---
Confidence 35789999999731 6799999999999987532 12457999999 9999999999999965310
Q ss_pred cCCCCccccccccccCccCCCChHHHHHHHHHHHHHHHhcCcceeecCCC---CCHHHHHHHHHHcCC--eEEeeccccc
Q 022028 98 ADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGG---QHVSEMAKAVELLGL--RACLVQSTMD 172 (304)
Q Consensus 98 ~~~~~~~~~l~~~~~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~d~~~---~~~~~~~~~~~~~gi--r~~~~~~~~d 172 (304)
. .| . +. ..+++++||||+++++. ...+.+.+.+++.+. +.++.....
T Consensus 69 ----~--~~------~-----~~----------~~~~~~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~- 120 (379)
T 2ics_A 69 ----L--YY------D-----YP----------DEIGVKKGVTTVIDAGTTGAENIHEFYDLAQQAKTNVFGLVNISKW- 120 (379)
T ss_dssp ----S--SC------C-----CH----------HHHTGGGTEEEEEEESSSCTTTHHHHHHHHHTSSSEEEEEEESSTT-
T ss_pred ----c--cc------C-----ch----------hhhHhhCceeEEEcCCCCCccCHHHHHHHHHhhcccEEEEcccccc-
Confidence 0 01 0 11 13578999999998642 234556677677664 333332221
Q ss_pred CCCCCCC-CcccCChHHHHHHHHHHHHHHcCCCCCCeEEEEeeCcccCCCHHHHHHHHHHHHH-hCCeeeEEecCChhhH
Q 022028 173 CGEGLPA-SWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMARE-FKTGIHMHVAEIPYEN 250 (304)
Q Consensus 173 ~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~e~l~~~~~~a~~-~~~~~~~H~~E~~~~~ 250 (304)
|. .+. .... ......+..+++++.+.. +...++....+.....++.+.++++.++|++ +++++.+|+.++....
T Consensus 121 -G~-~~~~~~~~-~~~~~~~~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~a~~~~g~~v~~H~~~~~~~~ 196 (379)
T 2ics_A 121 -GI-VAQDELAD-LSKVQASLVKKAIQELPD-FVVGIKARMSRTVIGDNGITPLELAKQIQQENQEIPLMVHIGSAPPHL 196 (379)
T ss_dssp -TT-SSSCTTSS-GGGCCHHHHHHHHHHCTT-TEEEEEEEESHHHHTTCTTHHHHHHHHHHHTTTTCCEEEEECSSSSCH
T ss_pred -CC-CCHHHHHH-HHHHHHHHHHHHHHhhhC-cceEEEEeccccccccchHHHHHHHHHHHHHhcCCeEEEeCCCCcchH
Confidence 11 111 1110 011112334444544321 1112344444333345778888899999999 9999999998765433
Q ss_pred H
Q 022028 251 Q 251 (304)
Q Consensus 251 ~ 251 (304)
+
T Consensus 197 ~ 197 (379)
T 2ics_A 197 D 197 (379)
T ss_dssp H
T ss_pred H
Confidence 3
|
| >3gri_A Dihydroorotase, dhoase; hydrolase, IDP00795, metal-binding, pyrimidine biosynthesis, structural genomics; 2.00A {Staphylococcus aureus subsp} | Back alignment and structure |
|---|
Probab=99.74 E-value=2e-17 Score=150.65 Aligned_cols=172 Identities=16% Similarity=0.196 Sum_probs=113.2
Q ss_pred EEEEccEEEecCCCCceeeeeeEEEeCCEEEEecCChhhhhhhcCCCceEEeCCCCEeeccccccCccchhhhhhcccCC
Q 022028 21 MILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIADD 100 (304)
Q Consensus 21 ~li~~~~ii~~~~~~~~~~~~~I~I~~g~I~~i~~~~~~~~~~~~~~~~vID~~g~iv~PG~ID~H~Hl~~s~~~g~~~~ 100 (304)
++|+|++|++ . ....+++|+|+||||++|++..++ +.+.++||++|++|+|||||+|+|+.....
T Consensus 2 ~~i~~~~v~~-~---~~~~~~~v~i~~g~I~~i~~~~~~-----~~~~~~id~~g~~v~PG~iD~H~H~~~~g~------ 66 (424)
T 3gri_A 2 KLIKNGKVLQ-N---GELQQADILIDGKVIKQIAPAIEP-----SNGVDIIDAKGHFVSPGFVDVHVHLREPGG------ 66 (424)
T ss_dssp EEEESCEEEE-T---TEEEECEEEEETTEEEEEESCCCC-----CSSCEEEECTTCEEEECEEEEEECCCTTTC------
T ss_pred EEEEeeEEEc-C---CCceeeeEEEECCEEEEecCCCCC-----CCCCeEEECCCCEEEeCeEEeeecCCCCCC------
Confidence 6899999998 3 356789999999999999986542 235789999999999999999999864210
Q ss_pred CCccccccccccCccCCCChHHHHHHHHHHHHHHHhcCcceeecCCCC--------CHHHHHHHHHHcCCeEEeeccccc
Q 022028 101 VDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQ--------HVSEMAKAVELLGLRACLVQSTMD 172 (304)
Q Consensus 101 ~~~~~~l~~~~~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~d~~~~--------~~~~~~~~~~~~gir~~~~~~~~d 172 (304)
...++++. ....++++|||+++++... ..+...+.++..+.+.+.....+.
T Consensus 67 -----------------~~~~~~~~----~~~~~~~~G~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 125 (424)
T 3gri_A 67 -----------------EYKETIET----GTKAAARGGFTTVCPMPNTRPVPDSVEHFEALQKLIDDNAQVRVLPYASIT 125 (424)
T ss_dssp -----------------TTTCCHHH----HHHHHHHTTEEEEEECSCSSSCSCSHHHHHHHHHHHHHHCSSEECCCEESB
T ss_pred -----------------CCHHHHHH----HHHHHHhCCEEEEeECcCCCCCCChHHHHHHHHHHhccCCCceEEEEEEEe
Confidence 01122222 2334688999999987631 133455666777775443222221
Q ss_pred CCCCCCCCcccCChHHHHHHHHHHHHHHcCCCCCCeEEEEeeCcccCCCHHHHHHHHHHHHHhCCeeeEEecCC
Q 022028 173 CGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEI 246 (304)
Q Consensus 173 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~e~l~~~~~~a~~~~~~~~~H~~E~ 246 (304)
.+. .... +.+..++.+ . |.+ .+++.+.+.++++.++++++.|+++|+++++|+.+.
T Consensus 126 ~~~--~~~~--------l~~l~~l~~----~--G~~--~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~e~~ 181 (424)
T 3gri_A 126 TRQ--LGKE--------LVDFPALVK----E--GAF--AFTDDGVGVQTASMMYEGMIEAAKVNKAIVAHCEDN 181 (424)
T ss_dssp GGG--CSSS--------BCCHHHHHT----T--TCC--CEEECSSCCCSHHHHHHHHHHHHHHTCCEEECCCCG
T ss_pred cCC--Ccch--------HHHHHHHHh----c--CcE--EEecCCcCcCCHHHHHHHHHHHHhcCCEEEEeCCCH
Confidence 110 0010 011222221 1 222 245667778899999999999999999999997543
|
| >2z00_A Dihydroorotase; zinc binding protein, hydrolase, metal-binding, pyrimidine biosynthesis, structural genomics, NPPSFA; 2.42A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=99.74 E-value=8.3e-17 Score=146.33 Aligned_cols=169 Identities=17% Similarity=0.208 Sum_probs=113.4
Q ss_pred EEEEccEEEecCCCCceeeeeeEEEeCCEEEEecCChhhhhhhcCCCceEEeCCCCEeeccccccCccchhhhhhcccCC
Q 022028 21 MILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIADD 100 (304)
Q Consensus 21 ~li~~~~ii~~~~~~~~~~~~~I~I~~g~I~~i~~~~~~~~~~~~~~~~vID~~g~iv~PG~ID~H~Hl~~s~~~g~~~~ 100 (304)
++|+|++|++++ ..+.+++|+|+||||++|++. + +.++||++|++|+|||||+|+|+....
T Consensus 2 ~~i~~~~v~~~~---~~~~~~~v~i~~g~I~~i~~~-~--------~~~~id~~g~~v~PG~iD~H~H~~~~~------- 62 (426)
T 2z00_A 2 ILIRNVRLVDAR---GERGPADVLIGEGRILSLEGG-E--------AKQVVDGTGCFLAPGFLDLHAHLREPG------- 62 (426)
T ss_dssp EEEEEEEEEETT---EEEEEEEEEEETTEEEESBCC-C--------CSEEEECTTCEEEECEEEEEECCCTTT-------
T ss_pred EEEEeeEEECCC---CceecceEEEECCEEEEEecC-C--------CceEEeCCCCEEecCEEEeccccCCCC-------
Confidence 689999999854 356789999999999999864 1 357999999999999999999996521
Q ss_pred CCccccccccccCccCCCChHHHHHHHHHHHHHHHhcCcceeecCCCC--------CHHHHHHHHHHcC-CeEEeecccc
Q 022028 101 VDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQ--------HVSEMAKAVELLG-LRACLVQSTM 171 (304)
Q Consensus 101 ~~~~~~l~~~~~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~d~~~~--------~~~~~~~~~~~~g-ir~~~~~~~~ 171 (304)
..| .++++ .....++++||||++++... ..+...+++++.+ +|.+....+
T Consensus 63 ---~~~-------------~~~~~----~~~~~~~~~GvTt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 121 (426)
T 2z00_A 63 ---EEV-------------KEDLF----SGLLAAVRGGYTDLVSMPNTKPPVDTPEAVRALKEKAKALGLARLHPAAAL- 121 (426)
T ss_dssp ---CTT-------------TCCHH----HHHHHHHHTTEEEEEECSCSSSCSCSHHHHHHHHHHHHHHTSSEECCEECS-
T ss_pred ---CCc-------------hHHHH----HHHHHHHhCCccEEEecCCCCCCcChHHHHHHHHHHhcccCcccEEEEEEe-
Confidence 011 11222 23356789999999987632 1345566667777 776332211
Q ss_pred cCCCCCCCCcccCChHHHHHHHHHHHHHHcCCCCCCeEEEEeeCcccCCCHHHHHHHHHHHHHhCCeeeEEecCCh
Q 022028 172 DCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIP 247 (304)
Q Consensus 172 d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~e~l~~~~~~a~~~~~~~~~H~~E~~ 247 (304)
..+ ..... +++.+++++. +. ..++++..+.++++.++++++.|+++|+++.+|+.+..
T Consensus 122 ~~~--~~~~~--------~~~~~~l~~~------g~--~~i~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~ 179 (426)
T 2z00_A 122 TEK--QEGKT--------LTPAGLLREA------GA--VLLTDDGRTNEDAGVLAAGLLMAAPLGLPVAVHAEDAG 179 (426)
T ss_dssp BGG--GCSSS--------BCCHHHHHHH------TC--CEEECTTSCCCCHHHHHHHHHHHGGGTCCEEECCCCHH
T ss_pred ecC--CChhh--------HHHHHHHHHc------CC--EEEECCCcCCCCHHHHHHHHHHHHhhCCEEEEeCCCHH
Confidence 100 01111 1112233331 22 23455666678999999999999999999999987654
|
| >3mpg_A Dihydroorotase, dhoase; hydrolase; 2.60A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=99.74 E-value=1e-16 Score=146.15 Aligned_cols=173 Identities=13% Similarity=0.208 Sum_probs=113.6
Q ss_pred cEEEEccEEEecCCCCceeeeeeEEEeCCEEEEecCChhhhhhhcCCCceEEeCCCCEeeccccccCccchhhhhhcccC
Q 022028 20 TMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIAD 99 (304)
Q Consensus 20 ~~li~~~~ii~~~~~~~~~~~~~I~I~~g~I~~i~~~~~~~~~~~~~~~~vID~~g~iv~PG~ID~H~Hl~~s~~~g~~~ 99 (304)
+++|+|++|++.. ....+++|+|+||||++|++..+ +.+.++||++|++|+|||||+|+|+.....
T Consensus 2 ~~~i~~~~v~~~~---~~~~~~~v~i~~g~I~~i~~~~~------~~~~~~id~~g~~v~PG~iD~H~H~~~~~~----- 67 (428)
T 3mpg_A 2 NYLFKNGRYMNEE---GKIVATDLLVQDGKIAKVAENIT------ADNAEVIDVNGKLIAPGLVDVHVHLREPGG----- 67 (428)
T ss_dssp EEEEEEEEEECSS---SCEEEEEEEEESSBEEECCSSCC------CTTSEEEECTTCEEEECEEEEEECCCTTTC-----
T ss_pred cEEEEeeEEEeCC---CCeeeeeEEEECCEEEEecCCCC------CCCCeEEECCCCEEeeCEEEEeeccCCCCC-----
Confidence 4789999999733 35678999999999999998653 135789999999999999999999854210
Q ss_pred CCCccccccccccCccCCCChHHHHHHHHHHHHHHHhcCcceeecCCCC-----C---HHHHHHHHHHcCCeEEeecccc
Q 022028 100 DVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQ-----H---VSEMAKAVELLGLRACLVQSTM 171 (304)
Q Consensus 100 ~~~~~~~l~~~~~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~d~~~~-----~---~~~~~~~~~~~gir~~~~~~~~ 171 (304)
...++++. ....++++|||+++++... . .+...+.++..+.+.+.....+
T Consensus 68 ------------------~~~~~~~~----~~~~~~~~GvTt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 125 (428)
T 3mpg_A 68 ------------------EHKETIET----GTLAAAKGGFTTICAMPNTRPVPDCREHMEDLQNRIKEKAHVNVLPYGAI 125 (428)
T ss_dssp ------------------TTTCCHHH----HHHHHHHHTEEEEEECSCSSSCSCSHHHHHHHHHHHHHHCSSEEEECEES
T ss_pred ------------------CchhHHHH----HHHHHHhCCeEEEEeCCCCCCCCCcHHHHHHHHHHhcccCCcEEEEEeeE
Confidence 01122222 2344688999999986421 1 3345556666676654433222
Q ss_pred cCCCCCCCCcccCChHHHHHHHHHHHHHHcCCCCCCeEEEEeeCcccCCCHHHHHHHHHHHHHhCCeeeEEecCC
Q 022028 172 DCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEI 246 (304)
Q Consensus 172 d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~e~l~~~~~~a~~~~~~~~~H~~E~ 246 (304)
..+. .... +.+..++.+. |.+ .+++.+.+.++++.++++++.|+++|+++.+|+.+.
T Consensus 126 ~~~~--~~~~--------l~~~~~l~~~------G~~--~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~vH~~~~ 182 (428)
T 3mpg_A 126 TVRQ--AGSE--------MTDFETLKEL------GAF--AFTDDGVGVQDASMMLAAMKRAAKLNMAVVAHCEEN 182 (428)
T ss_dssp BGGG--CSSS--------BCCHHHHHHT------TCC--CEECTTSCCCCHHHHHHHHHHHHHTTCCEEECCCCG
T ss_pred ecCC--Ccch--------HHHHHHHHHh------CCE--EEECCCcCCCCHHHHHHHHHHHHhcCCeEEEECCCh
Confidence 2110 0000 0112223322 222 235666677899999999999999999999998654
|
| >3gip_A N-acyl-D-glutamate deacylase; amidohydrolase family, hydrolase; 1.50A {Bordetella bronchiseptica} PDB: 3giq_A* | Back alignment and structure |
|---|
Probab=99.74 E-value=1.1e-16 Score=147.95 Aligned_cols=183 Identities=15% Similarity=0.099 Sum_probs=111.6
Q ss_pred CcccEEEEccEEEecCCCCceeeeeeEEEeCCEEEEecCChhhhhhhcCCCceEEeCCCCEeeccccccCccchhhhhhc
Q 022028 17 SSSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKG 96 (304)
Q Consensus 17 ~~~~~li~~~~ii~~~~~~~~~~~~~I~I~~g~I~~i~~~~~~~~~~~~~~~~vID~~g~iv~PG~ID~H~Hl~~s~~~g 96 (304)
|+.+++|+|++|++++. ....+++|+|+||||++|++..+ ..+.++||++|++|+|||||+|+|+..+.++.
T Consensus 5 ~~~~~~i~~~~v~~~~~--~~~~~~~v~i~~g~I~~i~~~~~------~~~~~~id~~g~~v~PG~iD~H~H~~~~~~~~ 76 (480)
T 3gip_A 5 EKLDFKITGGWIIDGTG--APRRRADLGVRDGRIAAIGELGA------HPARHAWDASGKIVAPGFIDVHGHDDLMFVEK 76 (480)
T ss_dssp CCEEEEEESSEECCSSS--CCCEECEEEEETTEEEEEECCTT------SCEEEEEECTTSEEEECEEESSCCCTTHHHHS
T ss_pred ccCCEEEECcEEECCCC--CeeeeeEEEEECCEEEEecCCCC------CCCCeEEECCCCEEccCEEeccccccccccCC
Confidence 44578999999998653 34568899999999999998643 23568999999999999999999997654332
Q ss_pred ccCCCCccccccccccCccCCCChHHHHHHHHHHHHHHHhcCcceeecC---------CC-----------------CCH
Q 022028 97 IADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEA---------GG-----------------QHV 150 (304)
Q Consensus 97 ~~~~~~~~~~l~~~~~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~d~---------~~-----------------~~~ 150 (304)
.. ....+.+|+||+++. .. ...
T Consensus 77 ~~--------------------------------~~~~~~~G~Tt~~~g~cG~~~~p~~~~~~~~~~~~l~~~~~~~~~~ 124 (480)
T 3gip_A 77 PD--------------------------------LRWKTSQGITTVVVGNCGVSAAPAPLPGNTAAALALLGETPLFADV 124 (480)
T ss_dssp TT--------------------------------CHHHHTTTEEEEEECCTTCCSCSCCCTTCCCGGGGGTCSSCCCSSH
T ss_pred hh--------------------------------HHHHhcCCeeEEEecCCCcCCCCCCcccchhhhhhhhccCccccCH
Confidence 00 012388999999872 10 113
Q ss_pred HHHHHHHHHcC--CeEEeecccc-----cCCCCCCCCcccCChHHHHHHHHHHHHHHcCCCCCCeEEEEeeCcccCCCHH
Q 022028 151 SEMAKAVELLG--LRACLVQSTM-----DCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDR 223 (304)
Q Consensus 151 ~~~~~~~~~~g--ir~~~~~~~~-----d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~e 223 (304)
....+.....+ +......... -.|. . . .....+.+++..+++++....+.-.++..+.+......+.+
T Consensus 125 ~~~~~~~~~~~~~~~~~~~~g~~~~r~~~~g~-~---~-~~~~~~~l~~m~~l~~~~~~~Ga~g~~~~~~y~p~~~~~~~ 199 (480)
T 3gip_A 125 PAYFAALDAQRPMINVAALVGHANLRLAAMRD-P---Q-AAPTAAEQQAMQDMLQAALEAGAVGFSTGLAYQPGAVAQAA 199 (480)
T ss_dssp HHHHHHHHHSCCSSEEEEEEEHHHHHHHHCSS-T---T-SCCCHHHHHHHHHHHHHHHHHTCCEEEEETTSTTGGGCCHH
T ss_pred HHHHHHHHhCCCCceEEEccccHHHHHHhcCC-c---C-CCCCHHHHHHHHHHHHHHHHCCCcEEeecCccCCcccCCHH
Confidence 34444544433 3222110000 0010 0 0 11123444555555554333322234433333222335777
Q ss_pred HHHHHHHHHHHhCCeeeEEec
Q 022028 224 LLLETRDMAREFKTGIHMHVA 244 (304)
Q Consensus 224 ~l~~~~~~a~~~~~~~~~H~~ 244 (304)
.+.++.+.++++|..+.+|+-
T Consensus 200 el~~~~~~a~~~g~~v~~H~~ 220 (480)
T 3gip_A 200 ELEGLARVAAERRRLHTSHIR 220 (480)
T ss_dssp HHHHHHHHHHHTTCEEEEECS
T ss_pred HHHHHHHHHHHcCCEEEEEec
Confidence 777888999999999999984
|
| >3e74_A Allantoinase; (beta/alpha)8-barrel domain, small beta-sheet domain, hydrolase, metal-binding, purine metabolism, zinc; HET: KCX; 2.10A {Escherichia coli} | Back alignment and structure |
|---|
Probab=99.73 E-value=4.3e-17 Score=150.34 Aligned_cols=176 Identities=18% Similarity=0.222 Sum_probs=103.7
Q ss_pred CcccEEEEccEEEecCCCCceeeeeeEEEeCCEEEEecCChhhhhhhcCCCceEEeCCCCEeeccccccCccchhhhhhc
Q 022028 17 SSSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKG 96 (304)
Q Consensus 17 ~~~~~li~~~~ii~~~~~~~~~~~~~I~I~~g~I~~i~~~~~~~~~~~~~~~~vID~~g~iv~PG~ID~H~Hl~~s~~~g 96 (304)
|+.+++|+|++|++++. ..+++|+|+||||++|++..+. ..++||++|++|+|||||+|+|+.....
T Consensus 21 m~~~~~i~~~~v~~~~~----~~~~~v~i~~g~I~~i~~~~~~-------~~~~id~~g~~v~PG~iD~H~H~~~~g~-- 87 (473)
T 3e74_A 21 MSFDLIIKNGTVILENE----ARVVDIAVKGGKIAAIGQDLGD-------AKEVMDASGLVVSPGMVDAHTHISEPGR-- 87 (473)
T ss_dssp -CEEEEEESCEEECSSC----EEECEEEEETTEEEEEESCCCC-------EEEEEECTTCEEEECEEEEEECC-------
T ss_pred CcCCEEEEeeEEECCCC----ceeeeEEEECCEEEEEcCCCCC-------CCcEEECCCCEEecCEEEEecccCCCCC--
Confidence 44568999999998652 4588999999999999986531 3689999999999999999999965211
Q ss_pred ccCCCCccccccccccCccCCCChHHHHHHHHHHHHHHHhcCcceeecCC-CC-----CHHHHHHHHHHcCCeEEeeccc
Q 022028 97 IADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAG-GQ-----HVSEMAKAVELLGLRACLVQST 170 (304)
Q Consensus 97 ~~~~~~~~~~l~~~~~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~d~~-~~-----~~~~~~~~~~~~gir~~~~~~~ 170 (304)
...++++ .....++.+||||++++. .. ..+.+........-+..+...+
T Consensus 88 ---------------------~~~~~~~----~~~~~~~~~G~Tt~~~~~~~t~p~~~~~~~~~~~~~~a~~~~~~d~~~ 142 (473)
T 3e74_A 88 ---------------------SHWEGYE----TGTRAAAKGGITTMIEMPLNQLPATVDRASIELKFDAAKGKLTIDAAQ 142 (473)
T ss_dssp -------------------------CHH----HHHHHHHHTTEEEEEECCSSSSSCSCSHHHHHHHHHHHTTTCSSEEEE
T ss_pred ---------------------CcHHHHH----HHHHHHHhCCEEEEEcCcccCCCCcccHHHHHHHHHHhccCCeEEEEE
Confidence 0012222 233456899999999986 21 1222222222111111000000
Q ss_pred ccCCCCCCCCcccCChHHHHHHHHHHHHHHcCCCCCCeEEEEe-------eCcccCCCHHHHHHHHHHHHHhCCeeeEEe
Q 022028 171 MDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFG-------IRQIMNATDRLLLETRDMAREFKTGIHMHV 243 (304)
Q Consensus 171 ~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~-------~~~~~~~~~e~l~~~~~~a~~~~~~~~~H~ 243 (304)
. + +..+.. +++..++.+. +...+|.++. ++..+.++++.++++++.|+++|.++.+|+
T Consensus 143 ~--~-~~~~~~--------~~~l~~l~~~----G~~~~K~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~ 207 (473)
T 3e74_A 143 L--G-GLVSYN--------IDRLHELDEV----GVVGFKCFVATCGDRGIDNDFRDVNDWQFFKGAQKLGELGQPVLVHC 207 (473)
T ss_dssp C--E-ECCTTC--------TTTHHHHHHH----TCSCEEEEC------------CCCCHHHHHHHHHHHHHHTCCEEEEC
T ss_pred E--e-ecccch--------HHHHHHHHHc----CCCEEEEeccccCCcccccccCCCCHHHHHHHHHHHHhcCCeEEEEe
Confidence 0 0 000110 1222333332 2234665554 234567789999999999999999999997
Q ss_pred cC
Q 022028 244 AE 245 (304)
Q Consensus 244 ~E 245 (304)
.+
T Consensus 208 e~ 209 (473)
T 3e74_A 208 EN 209 (473)
T ss_dssp SC
T ss_pred cC
Confidence 54
|
| >1o12_A N-acetylglucosamine-6-phosphate deacetylase; structural genomics, TM0814, JCSG, PSI, protein structure initiative; 2.50A {Thermotoga maritima} SCOP: b.92.1.5 c.1.9.10 | Back alignment and structure |
|---|
Probab=99.71 E-value=8.1e-19 Score=157.35 Aligned_cols=194 Identities=14% Similarity=0.106 Sum_probs=113.8
Q ss_pred eeeeEEEeCCEEEEecCChhhhhhhcCCCceEEeCCCCEeeccccccCccchhhhhhcccCCCCccccccccccCccCCC
Q 022028 39 RNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIADDVDLMTWLHDRIWPYESNM 118 (304)
Q Consensus 39 ~~~~I~I~~g~I~~i~~~~~~~~~~~~~~~~vID~~g~iv~PG~ID~H~Hl~~s~~~g~~~~~~~~~~l~~~~~~~~~~~ 118 (304)
.+++|+|+||||++|++ + + || +|++|+|||||+|+|+..+.. +.+ .
T Consensus 28 ~~~~V~I~~g~I~~vg~-----------~-~-iD-~g~~v~PGlID~H~H~~~~~~--------~~~------------~ 73 (376)
T 1o12_A 28 FTGDVEIEEGKIVKVEK-----------R-E-CI-PRGVLMPGFVDPHIHGVVGAD--------TMN------------C 73 (376)
T ss_dssp EEEEEEEETTEEEEEEE-----------C-C-SC-CSSEEEECEEEEEECEETTEE--------TTT------------T
T ss_pred cCceEEEECCEEEEeCC-----------C-c-cC-CCCEEccCeEEEeecCCCCCC--------CCh------------h
Confidence 68899999999999974 1 4 89 999999999999999965321 000 0
Q ss_pred ChHHHHHHHHHHHHHHHhcCcceeecCCCCC--------HHHHHHHHHH-cC--CeEEeecccccCCCCCCCCcccCChH
Q 022028 119 TEEDSYISTLLCGIELIHSGVTCFAEAGGQH--------VSEMAKAVEL-LG--LRACLVQSTMDCGEGLPASWAVRTTD 187 (304)
Q Consensus 119 ~~e~~~~~~~~~~~~~l~~GvTtv~d~~~~~--------~~~~~~~~~~-~g--ir~~~~~~~~d~g~~~~~~~~~~~~~ 187 (304)
+ ....+.+++++||||++++.... .+...+++++ .| ++.+... |+.+.+........
T Consensus 74 ~-------l~~~~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~g~~~~-----g~~~~~~~~g~~~~ 141 (376)
T 1o12_A 74 D-------FSEMEEFLYSQGVTTFLATTVSTSLEKMKEILRKARDYILENPSTSLLGVHLE-----GPYISKEKKGAHSE 141 (376)
T ss_dssp C-------HHHHHHHHHTTTEEEEEEECCSCCHHHHHHHHHHHHHHHHHCTTCSEEEEEEE-----CSSSCGGGCTTSCT
T ss_pred h-------HHHHHHHHHhCCcEEEEeccCCCCHHHHHHHHHHHHHHhhccCCCceEEEEEE-----cCcCCcccCCCCCH
Confidence 1 11246778999999999976321 1233445555 46 4433221 11111111110111
Q ss_pred HHHHHH-HHHHHHHcCCCCCCeEEEEeeCcccCCCHHHHHHHHHHHHHhCCeeeE-EecCChhhHHHHHHh--------c
Q 022028 188 DCIQSQ-KELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHM-HVAEIPYENQVVMDT--------R 257 (304)
Q Consensus 188 ~~~~~~-~~~~~~~~~~~~~~i~~~~~~~~~~~~~~e~l~~~~~~a~~~~~~~~~-H~~E~~~~~~~~~~~--------~ 257 (304)
+.++.. .+.++++. +....+.++|..+.. ++.++|+++|+++++ |+.|+.++.+.+++. |
T Consensus 142 ~~~~~~~~~~~~~~~---~~~~~~~~~pe~~~~-------~~i~~A~~~g~~v~igH~~~~~~~i~~a~~~G~~~itH~~ 211 (376)
T 1o12_A 142 KHIRPPSERELSEID---SPAKMLTFAPEIESS-------ELLLRLVKRDIVLSAGHSIATFEEFMKFYKEGVKRITHFP 211 (376)
T ss_dssp TTCCCCCHHHHTTCC---TTEEEEEECTTSTTG-------GGGGGGGGGTCEEEECSBCCCHHHHHHHHTTTCCEESSTT
T ss_pred HHhcCCCHHHHHHhh---CCeEEEEEccCCccH-------HHHHHHHHCCCEEEeecCccCHHHHHHHHHCCCCeEEecc
Confidence 111111 34444441 222334555543322 467889999999999 999998877777664 2
Q ss_pred -CCCCCHHHHHHHhCCCC-----CCe---eEEEeccCCcchhc
Q 022028 258 -KVDHGTVTFLDKIEFLQ-----NNL---LSAHTVWVNHTEVN 291 (304)
Q Consensus 258 -g~~~~~~~~l~~~g~l~-----~~~---~~~H~~~l~~~di~ 291 (304)
+.+ +++++ +.|+++ +++ ++.||+++++.+++
T Consensus 212 ~~~~--~~~~~-~~g~~~~~l~~~~~~~~~~~~~~~~~p~~~~ 251 (376)
T 1o12_A 212 NGLK--PLHHR-EIGITGAGLLLDDVKLELICDGVHLSREMVK 251 (376)
T ss_dssp TTBC--CCCSS-CCHHHHHHHHCTTCEEEEECSSSSSCHHHHH
T ss_pred cCcC--Chhhc-ccchhhhhhcCCcceEEEeCCCcCcCHHHHH
Confidence 332 34433 333332 565 57899999887443
|
| >3hm7_A Allantoinase; metallo-dependent hydrolase, protein structure initiative, PSI-2, NEW YORK structural genomix research CON nysgxrc; 2.60A {Bacillus halodurans} | Back alignment and structure |
|---|
Probab=99.70 E-value=1.6e-16 Score=145.66 Aligned_cols=172 Identities=16% Similarity=0.138 Sum_probs=105.3
Q ss_pred cccEEEEccEEEecCCCCceeeeeeEEEeCCEEEEecC--ChhhhhhhcCCCceEEeCCCCEeeccccccCccchhhhhh
Q 022028 18 SSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQ--SADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAK 95 (304)
Q Consensus 18 ~~~~li~~~~ii~~~~~~~~~~~~~I~I~~g~I~~i~~--~~~~~~~~~~~~~~vID~~g~iv~PG~ID~H~Hl~~s~~~ 95 (304)
+.+++|+|++|++++. . .+++|+|+||||++|++ ..+ +.+.++||++|++|+|||||+|+|+.....
T Consensus 5 ~~~~~i~~~~v~~~~~---~-~~~~v~i~~g~I~~i~~~~~~~------~~~~~~id~~g~~v~PG~ID~H~H~~~~~~- 73 (448)
T 3hm7_A 5 RFDLIIRSSTVVTETT---T-YRADVAIRNGIVSAITEPGSIS------SDDGPAIDGTGLHLFPGMVDVHVHFNEPGR- 73 (448)
T ss_dssp CCSEEEEEEEEECSSC---E-EEEEEEEETTEEEEEESTTCSC------TTSSCEEECTTCEEEECEEEEEECCCTTTS-
T ss_pred cccEEEEeeEEECCCC---c-eEeEEEEECCEEEEeeCccCCC------CCCCeEEECCCCEEecCEEEeeeccCCCCC-
Confidence 3468999999998652 3 68899999999999998 332 135689999999999999999999965210
Q ss_pred cccCCCCccccccccccCccCCCChHHHHHHHHHHHHHHHhcCcceeecCC-CC-----CHHHH---HHHHHH-cCCeEE
Q 022028 96 GIADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAG-GQ-----HVSEM---AKAVEL-LGLRAC 165 (304)
Q Consensus 96 g~~~~~~~~~~l~~~~~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~d~~-~~-----~~~~~---~~~~~~-~gir~~ 165 (304)
. + .+++. .....++..|||+++++. .. ..+.+ .+.+.. ..++..
T Consensus 74 --------~-~-------------~~~~~----~~~~~~~~~Gvtt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 127 (448)
T 3hm7_A 74 --------T-E-------------WEGFA----SGSKSLAAGGVTTYFDMPLNSNPPTITREELDKKRQLANEKSLVDYR 127 (448)
T ss_dssp --------G-G-------------GCCSH----HHHHHHHTTTEEEEEECSSSSSSCSCSHHHHHHHHTHHHHHCSSEEE
T ss_pred --------C-c-------------HhHHH----HHHHHHHhCCEEEEEeCCCCCCCCCChHHHHHHHHHHhccCCeeEEE
Confidence 0 0 01111 123457899999999876 21 12222 222222 223332
Q ss_pred eecccccCCCCCCCCcccCChHHHHHHHHHHHHHHcCCCCCCeEEEEeeCcc---cCCCHHHHHHHHHHHHHhCCeeeEE
Q 022028 166 LVQSTMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQI---MNATDRLLLETRDMAREFKTGIHMH 242 (304)
Q Consensus 166 ~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~---~~~~~e~l~~~~~~a~~~~~~~~~H 242 (304)
...... +.. +++..++.+ .+.-.++.++..... ...+++.+.+++++|+++|+++.+|
T Consensus 128 ~~~~~~-------~~~--------~~~l~~l~~----~g~~~~~~~l~~~~~~~~~~~~~~~l~~~l~~a~~~g~~v~vH 188 (448)
T 3hm7_A 128 FWGGLV-------PGN--------IDHLQDLHD----GGVIGFKAFMSECGTDDFQFSHDETLLKGMKKIAALGSILAVH 188 (448)
T ss_dssp EEEECC-------TTC--------GGGHHHHHH----TTCSEEEEESSSCSSSSSCCCCHHHHHHHHHHHHHHTCCEEEE
T ss_pred EEEEec-------ccC--------HHHHHHHHH----cCCCEEEEeeccccCCccCcCCHHHHHHHHHHHHhcCCEEEEE
Confidence 211111 110 122223332 111224444433221 3458899999999999999999999
Q ss_pred ecC
Q 022028 243 VAE 245 (304)
Q Consensus 243 ~~E 245 (304)
+.+
T Consensus 189 ~~~ 191 (448)
T 3hm7_A 189 AES 191 (448)
T ss_dssp CCC
T ss_pred eCC
Confidence 744
|
| >4ac7_C Urease subunit alpha; hydrolase, bacillus pasteurii; HET: CXM KCX FLC; 1.50A {Sporosarcina pasteurii} PDB: 1s3t_C* 2ubp_C* 3ubp_C* 1ubp_C* 4ubp_C* 1ie7_C* | Back alignment and structure |
|---|
Probab=99.69 E-value=4.1e-16 Score=144.71 Aligned_cols=164 Identities=20% Similarity=0.238 Sum_probs=105.4
Q ss_pred cccEEEEccEEEecCCCCceeeeeeEEEeCCEEEEecCChhhhh-------hhcCCCceEEeCCCCEeeccccccCccch
Q 022028 18 SSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQ-------QFSQMADQIIDLQSQILLPGFVNTHVHTS 90 (304)
Q Consensus 18 ~~~~li~~~~ii~~~~~~~~~~~~~I~I~~g~I~~i~~~~~~~~-------~~~~~~~~vID~~g~iv~PG~ID~H~Hl~ 90 (304)
..+++|+|++|++.. . +..++|+|+||||++|++..++.. ...+.+.++||++|++|+|||||+|+|+.
T Consensus 66 ~~dllI~n~~vvd~~---g-~~~~dI~I~dG~I~~Ig~~~~~~~~~~v~~~~~~~~~~~vIDa~G~~v~PG~ID~HvH~~ 141 (570)
T 4ac7_C 66 VLDLLLTNALILDYT---G-IYKADIGVKDGYIVGIGKGGNPDIMDGVTPNMIVGTATEVIAAEGKIVTAGGIDTHVHFI 141 (570)
T ss_dssp BCSEEEEEEEEEETT---E-EEEEEEEEETTEEEEEECCBCTTTCSSCCTTCBCCTTCEEEECTTCEEEECEEEEEEECC
T ss_pred CCCEEEECeEEECCC---C-cEEEEEEEECCEEEEeecCCCccccccccccccCCCCceEEeCCCCEEeeCEEecccccC
Confidence 457899999999843 3 367899999999999998643200 00123568999999999999999999983
Q ss_pred hhhhhcccCCCCccccccccccCccCCCChHHHHHHHHHHHHHHHhcCcceeecCCCC---------------CHHHHHH
Q 022028 91 QQLAKGIADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQ---------------HVSEMAK 155 (304)
Q Consensus 91 ~s~~~g~~~~~~~~~~l~~~~~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~d~~~~---------------~~~~~~~ 155 (304)
. +... ..++.+||||+++.+.. ....+.+
T Consensus 142 ~----------------------------Pg~~--------~aAl~gGvTTvv~gg~~p~~~~n~~p~~~~~~~l~~~l~ 185 (570)
T 4ac7_C 142 N----------------------------PDQV--------DVALANGITTLFGGGTGPAEGSKATTVTPGPWNIEKMLK 185 (570)
T ss_dssp C----------------------------TTHH--------HHHHHTTEEEEEEECSSSCHHHHHSSCCCHHHHHHHHHH
T ss_pred C----------------------------cchH--------HHHHhcCCeEEEecCcCcccccCCcCcCCcHHHHHHHHH
Confidence 2 1110 35789999999953210 1123344
Q ss_pred HHHHcCCeEEeecccccCCCCCCCCcccCChHHHHHHHHHHHHHHcCCCCCCeEEEEeeCcccCCCHHHHHHHHHHHHHh
Q 022028 156 AVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREF 235 (304)
Q Consensus 156 ~~~~~gir~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~e~l~~~~~~a~~~ 235 (304)
+++...++..+..... . ..+++..++++. |.+ ++..+..+..+++.+++++++|+++
T Consensus 186 aa~~~~v~~~~~g~~~-------~--------~~l~el~el~~a------Ga~--gfK~~~~~~~~~~~L~~aL~~A~~~ 242 (570)
T 4ac7_C 186 STEGLPINVGILGKGH-------G--------SSIAPIMEQIDA------GAA--GLKIHEDWGATPASIDRSLTVADEA 242 (570)
T ss_dssp HHTTCSSEEEEEEECC-------C--------SSHHHHHHHHHH------TCC--EEEEEGGGCCCHHHHHHHHHHHHHH
T ss_pred HhhhCCeeEEEEeccC-------C--------cCHHHHHHHHHc------CCC--eEeeccCCCCCHHHHHHHHHHHHHc
Confidence 4454455442221110 0 012233344432 221 2222334567999999999999999
Q ss_pred CCeeeEEec
Q 022028 236 KTGIHMHVA 244 (304)
Q Consensus 236 ~~~~~~H~~ 244 (304)
++++.+|+.
T Consensus 243 g~~V~iHae 251 (570)
T 4ac7_C 243 DVQVAIHSD 251 (570)
T ss_dssp TCEEEEECC
T ss_pred CCEEEEEcC
Confidence 999999975
|
| >4ubp_C Protein (urease (chain C)); bacillus pasteurii, nickel, acetohydroxamic acid, metalloenzyme, hydrolase; HET: KCX; 1.55A {Sporosarcina pasteurii} SCOP: b.92.1.1 c.1.9.2 PDB: 1s3t_C* 2ubp_C* 3ubp_C* 1ubp_C* 1ie7_C* | Back alignment and structure |
|---|
Probab=99.69 E-value=4.1e-16 Score=144.71 Aligned_cols=164 Identities=20% Similarity=0.238 Sum_probs=105.4
Q ss_pred cccEEEEccEEEecCCCCceeeeeeEEEeCCEEEEecCChhhhh-------hhcCCCceEEeCCCCEeeccccccCccch
Q 022028 18 SSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQ-------QFSQMADQIIDLQSQILLPGFVNTHVHTS 90 (304)
Q Consensus 18 ~~~~li~~~~ii~~~~~~~~~~~~~I~I~~g~I~~i~~~~~~~~-------~~~~~~~~vID~~g~iv~PG~ID~H~Hl~ 90 (304)
..+++|+|++|++.. . +..++|+|+||||++|++..++.. ...+.+.++||++|++|+|||||+|+|+.
T Consensus 66 ~~dllI~n~~vvd~~---g-~~~~dI~I~dG~I~~Ig~~~~~~~~~~v~~~~~~~~~~~vIDa~G~~v~PG~ID~HvH~~ 141 (570)
T 4ubp_C 66 VLDLLLTNALILDYT---G-IYKADIGVKDGYIVGIGKGGNPDIMDGVTPNMIVGTATEVIAAEGKIVTAGGIDTHVHFI 141 (570)
T ss_dssp BCSEEEEEEEEEETT---E-EEEEEEEEETTEEEEEECCBCTTTCTTCCTTCBCCTTCEEEECTTCEEEECEEEEEEECC
T ss_pred CCCEEEECeEEECCC---C-cEEEEEEEECCEEEEeecCCCccccccccccccCCCCceEEeCCCCEEeeCEEEcccCCC
Confidence 457899999999843 3 367899999999999998643200 00123568999999999999999999983
Q ss_pred hhhhhcccCCCCccccccccccCccCCCChHHHHHHHHHHHHHHHhcCcceeecCCCC---------------CHHHHHH
Q 022028 91 QQLAKGIADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQ---------------HVSEMAK 155 (304)
Q Consensus 91 ~s~~~g~~~~~~~~~~l~~~~~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~d~~~~---------------~~~~~~~ 155 (304)
. +... ..++.+||||+++.+.. ....+.+
T Consensus 142 ~----------------------------Pg~~--------~aAl~gGvTTvv~gg~~p~~~~n~~p~~~~~~~l~~~l~ 185 (570)
T 4ubp_C 142 N----------------------------PDQV--------DVALANGITTLFGGGTGPAEGSKATTVTPGPWNIEKMLK 185 (570)
T ss_dssp C----------------------------TTHH--------HHHHHTTEEEEEEECCSSCHHHHHSSCCCHHHHHHHHHH
T ss_pred C----------------------------cchH--------HHHHhcCCeEEEecCccccccCCCcCCCCcHHHHHHHHH
Confidence 2 1110 35789999999953210 1223344
Q ss_pred HHHHcCCeEEeecccccCCCCCCCCcccCChHHHHHHHHHHHHHHcCCCCCCeEEEEeeCcccCCCHHHHHHHHHHHHHh
Q 022028 156 AVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREF 235 (304)
Q Consensus 156 ~~~~~gir~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~e~l~~~~~~a~~~ 235 (304)
+++...++..+..... . ..+++..++++. |.+ ++..+..+..+++.+++++++|+++
T Consensus 186 aa~~~~v~~~~~g~~~-------~--------~~l~el~el~~a------Ga~--gfK~~~~~~~~~~~L~~aL~~A~~~ 242 (570)
T 4ubp_C 186 STEGLPINVGILGKGH-------G--------SSIAPIMEQIDA------GAA--GLKIHEDWGATPASIDRSLTVADEA 242 (570)
T ss_dssp HHTTCSSEEEEEEECC-------C--------SSHHHHHHHHHH------TCC--EEEEEGGGCCCHHHHHHHHHHHHHH
T ss_pred HhhhCCeeEEEEeccC-------C--------cCHHHHHHHHHc------CCC--eEeeccCCCCCHHHHHHHHHHHHHc
Confidence 4454455442221110 0 012233344432 221 2222334567999999999999999
Q ss_pred CCeeeEEec
Q 022028 236 KTGIHMHVA 244 (304)
Q Consensus 236 ~~~~~~H~~ 244 (304)
++++.+|+.
T Consensus 243 g~~V~iHae 251 (570)
T 4ubp_C 243 DVQVAIHSD 251 (570)
T ss_dssp TCEEEEECC
T ss_pred CCEEEEEcC
Confidence 999999975
|
| >3iv8_A N-acetylglucosamine-6-phosphate deacetylase; IDP01334, fruct phosphate, carbohydrate metabolism, hydrolase; HET: F6P; 2.53A {Vibrio cholerae} PDB: 3egj_A* | Back alignment and structure |
|---|
Probab=99.68 E-value=1.4e-16 Score=141.72 Aligned_cols=193 Identities=15% Similarity=0.087 Sum_probs=112.7
Q ss_pred EEEEccEEEecCCCCceeeeeeEEEeCCEEEEecCChhhhhhhcCCCceEEeCCCCEeeccccccCccchhhhhhcccCC
Q 022028 21 MILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIADD 100 (304)
Q Consensus 21 ~li~~~~ii~~~~~~~~~~~~~I~I~~g~I~~i~~~~~~~~~~~~~~~~vID~~g~iv~PG~ID~H~Hl~~s~~~g~~~~ 100 (304)
++|+|++|++.+ ..+.+++|+|+||||.+|++..+. +.+.++||++|++|+|||||+|+|.....
T Consensus 5 ~~i~n~~i~~~~---~~~~~~~i~I~dG~I~~i~~~~~~-----~~~~~viD~~G~~v~PGfID~HvHg~~G~------- 69 (381)
T 3iv8_A 5 YALTNCKIYTGN---DVLVKHAVIINGDKIEAVCPIESL-----PSEMNVVDLNGANLSPGFIDLQLNGCGGV------- 69 (381)
T ss_dssp EEEEEEEEECSS---CEESSEEEEEETTEEEEEEEGGGS-----CTTCEEEEEEEEEEEECEEEEEECEETTE-------
T ss_pred EEEEccEEEcCC---CeEeccEEEEECCEEEEEeCCCCC-----CCCCeEEECCCCEEccCeEeeeecccCCC-------
Confidence 689999999854 466788999999999999876432 23568999999999999999999986421
Q ss_pred CCccccccccccCccCCCChHHHHHHHHHHHHHHHhcCcceeecCCC-CCHHH-------HHHHHHHcCCeEEeeccccc
Q 022028 101 VDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGG-QHVSE-------MAKAVELLGLRACLVQSTMD 172 (304)
Q Consensus 101 ~~~~~~l~~~~~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~d~~~-~~~~~-------~~~~~~~~gir~~~~~~~~d 172 (304)
.|. ...+.|++.. ....+++.|||+++.... ...+. +.+..+. +...+++.. =
T Consensus 70 -~~~-----------d~~~~e~l~~----~~~a~~~~GvTt~l~t~~T~~~e~l~~al~~~~~~~~~-~~~~ilGiH--l 130 (381)
T 3iv8_A 70 -MFN-----------DEITAETIDT----MHKANLKSGCTSFLPTLITSSDENMRQAIAAAREYQAK-YPNQSLGLH--L 130 (381)
T ss_dssp -ETT-----------TSCSHHHHHH----HHHHHHHTTEEEEEEEEESCCHHHHHHHHHHHHHHHHH-CSSSBCCEE--E
T ss_pred -CCC-----------CCCCHHHHHH----HHHHHHhCCccccccccCCCCHHHHHHHHHHHHHHHhc-CCCceeEee--c
Confidence 111 0122344333 334567899999987531 11221 2222222 111111111 1
Q ss_pred CCCCCCCCcccCChHHHHH-HHHHHHHHHcCCCCCCeE-EEEeeCcccCCCHHHHHHHHHHHHHhCCeeeEEecCChhhH
Q 022028 173 CGEGLPASWAVRTTDDCIQ-SQKELYAKHHHAADGRIR-IWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYEN 250 (304)
Q Consensus 173 ~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~i~-~~~~~~~~~~~~~e~l~~~~~~a~~~~~~~~~H~~E~~~~~ 250 (304)
+||++++.+.+.++.++++ -..+.++++.... +.++ +.++|.. ...+ +.+.++++|+.+.+ .++....
T Consensus 131 EGPfis~~~~Ga~~~~~i~~p~~~~~~~~~~~~-~~i~~vTlAPE~---~~~~----~i~~l~~~gi~vs~--GHs~A~~ 200 (381)
T 3iv8_A 131 EGPYLNVMKKGIHSVDFIRPSDDTMIDTICANS-DVIAKVTLAPEN---NKPE----HIEKLVKAGIVVSI--GHTNATY 200 (381)
T ss_dssp ECSSCCGGGCTTSCTTTCCCCCHHHHHHHHHTT-TSEEEEEECCTT---SCHH----HHHHHHHTTCEEEE--CSBCCCH
T ss_pred cCcccCHhhcCCCCHHHcCCCCHHHHHHHHhcc-CCeEEEEECCCC---CcHH----HHHHHHHCCCEEEe--cCCCCCH
Confidence 7888777776666555443 2233444443333 3454 4455542 2233 34455667877665 4444555
Q ss_pred HHHHHhc
Q 022028 251 QVVMDTR 257 (304)
Q Consensus 251 ~~~~~~~ 257 (304)
+++++.+
T Consensus 201 e~~~~a~ 207 (381)
T 3iv8_A 201 SEARKSF 207 (381)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 5555543
|
| >2gwn_A Dihydroorotase; zinc-binding prote structural genomics, PSI, protein structure initiative, MID center for structural genomics, MCSG; HET: KCX GOL; 1.85A {Porphyromonas gingivalis} | Back alignment and structure |
|---|
Probab=99.68 E-value=6.6e-17 Score=148.39 Aligned_cols=95 Identities=22% Similarity=0.291 Sum_probs=68.0
Q ss_pred ccEEEEccEEEecCCCCceeeeeeEEEeCCEEEEecC-ChhhhhhhcCCCceEEeCCCCEeeccccccCccchhhhhhcc
Q 022028 19 STMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQ-SADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGI 97 (304)
Q Consensus 19 ~~~li~~~~ii~~~~~~~~~~~~~I~I~~g~I~~i~~-~~~~~~~~~~~~~~vID~~g~iv~PG~ID~H~Hl~~s~~~g~ 97 (304)
++++|+|++|++.+ . +.+++|+|+||||++|++ ..+... +..+.++||++|++|+|||||+|+|+....
T Consensus 4 m~~li~~~~v~~~~---~-~~~~~v~i~~g~I~~i~~~~~~~~~--~~~~~~viD~~g~~v~PGlID~H~H~~~~~---- 73 (452)
T 2gwn_A 4 MKILLRNALITNEG---K-TFPGSVMIDGAFISRIIEGELPADD--NLSADEVIECSGLRLFPGCIDDQVHFREPG---- 73 (452)
T ss_dssp SEEEEEEEEEEETT---E-EEEEEEEEETTEEEEEEESCCCTTC--CTTCSEEEECTTCEEEECEEEEEECCCTTT----
T ss_pred ccEEEECeEEECCC---c-eeeeeEEEECCEEEEEecCCCcccc--CCCCCeEEeCCCCEEecCEEeeccccCCCC----
Confidence 36789999999854 3 468899999999999986 432100 012458999999999999999999996421
Q ss_pred cCCCCccccccccccCccCCCChHHHHHHHHHHHHHHHhcCcceeecCC
Q 022028 98 ADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAG 146 (304)
Q Consensus 98 ~~~~~~~~~l~~~~~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~d~~ 146 (304)
+ .++++++..+ ..++++||||++++.
T Consensus 74 -----~--------------~~~e~~~~~~----~~~~~~GvTt~~~~~ 99 (452)
T 2gwn_A 74 -----L--------------THKATIASES----RAAVAGGVTSFMDMP 99 (452)
T ss_dssp -----C--------------TTTCCHHHHH----HHHHHTTEEEEEECS
T ss_pred -----C--------------CcHHHHHHHH----HHHHhCCeEEEEcCC
Confidence 0 1123333333 345689999999876
|
| >3nqb_A Adenine deaminase 2; PSI-II, structural genomics, protein structure initiative, N SGX research center for structural genomics, nysgxrc; 2.21A {Agrobacterium tumefaciens} PDB: 3t81_A 3t8l_A | Back alignment and structure |
|---|
Probab=99.68 E-value=5.9e-16 Score=146.46 Aligned_cols=207 Identities=19% Similarity=0.190 Sum_probs=121.6
Q ss_pred ccEEEEccEEEecCCCCceeeeeeEEEeCCEEEEecCChhhhhhhcCCCceEEeCCCCEeeccccccCccchhhhhhccc
Q 022028 19 STMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIA 98 (304)
Q Consensus 19 ~~~li~~~~ii~~~~~~~~~~~~~I~I~~g~I~~i~~~~~~~~~~~~~~~~vID~~g~iv~PG~ID~H~Hl~~s~~~g~~ 98 (304)
.+++|+|++|++... ..+..++|+|+||||++|++... ...+.++||++|++|+|||||+|+|+..+.
T Consensus 35 ~dlli~n~~ivd~~~--~~~~~~dI~I~~G~I~~Vg~~~~-----~~~~~~vID~~G~~v~PG~ID~H~Hl~~~~----- 102 (608)
T 3nqb_A 35 FDVLITGGTLVDVVT--GELRPADIGIVGALIASVHEPAS-----RRDAAQVIDAGGAYVSPGLIDTHMHIESSM----- 102 (608)
T ss_dssp EEEEEESCEEECTTT--CCEEECEEEEETTEEEEEECTTS-----CCCEEEEEECTTSEEEECEEEEEECGGGGT-----
T ss_pred CCEEEECeEEEECCC--CeEEeeEEEEECCEEEEecCCCC-----CCCCCeEEeCCCCEEecCeEecccCccccc-----
Confidence 468999999998653 33457799999999999997542 123568999999999999999999996521
Q ss_pred CCCCccccccccccCccCCCChHHHHHHHHHHHHHHHhcCcceeecCCC--------CCHHHHHHHHHHcCCeEEeec-c
Q 022028 99 DDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGG--------QHVSEMAKAVELLGLRACLVQ-S 169 (304)
Q Consensus 99 ~~~~~~~~l~~~~~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~d~~~--------~~~~~~~~~~~~~gir~~~~~-~ 169 (304)
+++++. ...++.+|+||+++... .....+.+.++..+++.+... .
T Consensus 103 -------------------~~~~~~-------~~~al~~GvTtvv~~p~~~~~v~g~~~~~~~l~~a~~~~~~v~~~~p~ 156 (608)
T 3nqb_A 103 -------------------ITPAAY-------AAAVVARGVTTIVWDPHEFGNVHGVDGVRWAAKAIENLPLRAILLAPS 156 (608)
T ss_dssp -------------------SCHHHH-------HHHHHTTTEEEEEECCHHHHHHHTHHHHHHHHHHHTTCSSEEEEEECC
T ss_pred -------------------CCHHHH-------HHHHHhCCeEEEEcCCccccccCCHHHHHHHHHHhhhcCcEEEEeccc
Confidence 123322 24578999999986431 112334555566677776543 2
Q ss_pred cccCCCCCCCCcccCChHHHHHHHHHHHHHHcCCCCCCeEEE--EeeCcccCCCHHHHHHHHHHHHHhCCeeeEEecCCh
Q 022028 170 TMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIW--FGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIP 247 (304)
Q Consensus 170 ~~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~--~~~~~~~~~~~e~l~~~~~~a~~~~~~~~~H~~E~~ 247 (304)
+...+.++........ .++.+++++. .+.+.+. ....+. ...++.+.+.++.|++.++++.+|+.+..
T Consensus 157 ~~P~~~~~~~~g~~~~----~~el~~l~~~-----~~v~glgE~~~~~~v-~~~d~~l~~~l~~A~~~g~pV~~Ha~~~~ 226 (608)
T 3nqb_A 157 CVPSAPGLERGGADFD----AAILADLLSW-----PEIGGIAEIMNMRGV-IERDPRMSGIVQAGLAAEKLVCGHARGLK 226 (608)
T ss_dssp CSSSSTTSCCCSCCCC----HHHHHHHHTS-----TTEEEEEEECCHHHH-HTTCHHHHHHHHHHHHHTCEEEECCTTCC
T ss_pred cCCCCCccccCcccCC----HHHHHHHHhc-----cCcceeeEeeccCCc-CCCcHHHHHHHHHHHHcCCEEEEcCCCCC
Confidence 2111111111111111 1222233221 1222221 111111 23456677789999999999999976543
Q ss_pred hhHHHHHHhcCCCCCHHHHHHHhCCCCCCeeEEEeccCCcchhc
Q 022028 248 YENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEVN 291 (304)
Q Consensus 248 ~~~~~~~~~~g~~~~~~~~l~~~g~l~~~~~~~H~~~l~~~di~ 291 (304)
.+ .+..+.+.|+. ..||+..+++.++
T Consensus 227 ~~-------------~L~~~~~aGv~-----~~H~~~~~eea~e 252 (608)
T 3nqb_A 227 NA-------------DLNAFMAAGVS-----SDHELVSGEDLMA 252 (608)
T ss_dssp HH-------------HHHHHHHTTCC-----EECCCCSHHHHHH
T ss_pred HH-------------HHHHHHHcCCC-----eeeccCCHHHHHH
Confidence 21 23334445542 3688777655554
|
| >3mtw_A L-arginine carboxypeptidase CC2672; hydrolase; HET: KCX M3R; 1.70A {Caulobacter vibrioides} | Back alignment and structure |
|---|
Probab=99.67 E-value=2e-15 Score=133.48 Aligned_cols=109 Identities=20% Similarity=0.316 Sum_probs=77.1
Q ss_pred cEEEEccEEEecCCCCceeeeeeEEEeCCEEEEecCChhhhhhhcCCCceEEeCCCCEeeccccccCccchhhhhhcccC
Q 022028 20 TMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIAD 99 (304)
Q Consensus 20 ~~li~~~~ii~~~~~~~~~~~~~I~I~~g~I~~i~~~~~~~~~~~~~~~~vID~~g~iv~PG~ID~H~Hl~~s~~~g~~~ 99 (304)
...|+|++|+++.. .+++++++|+|+||||++|++..+. .+.+.++||++|++|+|||||+|+|+......+...
T Consensus 3 ~~aI~narviD~~~-g~~i~~~~V~I~dG~I~~Ig~~~~~----~~~~~~vID~~G~~v~PG~ID~H~H~~~~~~~~~~~ 77 (403)
T 3mtw_A 3 IKAVSAARLLDVAS-GKYVDNPLVIVTDGRITSIGKKGDA----VPAGATAVDLPGVTLLPGLIDMHVHLDSLAEVGGYN 77 (403)
T ss_dssp EEEEEEEEEEETTT-TEEEESEEEEEETTEEEEEEETTCC----CCTTCEEEEEEEEEEEECEEEEEECTTCCTTCCGGG
T ss_pred cEEEEceEEEECCC-CcEecCcEEEEECCEEEEEeCCCCC----CCCCCEEEECCCCEEEeChheeeeCCccccccCccc
Confidence 36799999998653 3688999999999999999986543 124679999999999999999999997654332111
Q ss_pred CCCccccccccccCccCCCChHHHHHHHHHHHHHHHhcCcceeecCCCC
Q 022028 100 DVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQ 148 (304)
Q Consensus 100 ~~~~~~~l~~~~~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~d~~~~ 148 (304)
.. ..................+..++++..+....
T Consensus 78 ~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 111 (403)
T 3mtw_A 78 SL---------------EYSDRFWSVVQTANAKKTLEAGFTTVRNVGAA 111 (403)
T ss_dssp GG---------------GSCHHHHHHHHHHHHHHHHHTTEEEEEECCCS
T ss_pred cc---------------cccHHHHhhhhhhhhhhccccccceeeccccc
Confidence 11 11122222333344566788899998877643
|
| >1onw_A Isoaspartyl dipeptidase; amidohydrolase, hydrolase, metalloprotease; HET: KCX; 1.65A {Escherichia coli} SCOP: b.92.1.7 c.1.9.13 PDB: 1onx_A* 1po9_A* 1poj_A* 1pok_B* 2aqo_A* 1ybq_A* 2aqv_A* | Back alignment and structure |
|---|
Probab=99.67 E-value=1.3e-15 Score=136.95 Aligned_cols=194 Identities=18% Similarity=0.191 Sum_probs=116.1
Q ss_pred cccEEEEccEEEecCCCCceeeeeeEEEeCCEEEEecCChhhhhhhcCCCceEEeCCCCEeeccccccCccchhhhhhcc
Q 022028 18 SSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGI 97 (304)
Q Consensus 18 ~~~~li~~~~ii~~~~~~~~~~~~~I~I~~g~I~~i~~~~~~~~~~~~~~~~vID~~g~iv~PG~ID~H~Hl~~s~~~g~ 97 (304)
|.+++|+|++|++++ . ..+++|+|+||||++|++..+.. . +.+.++||++|++|+|||||+|+|+....
T Consensus 7 ~~~~~i~n~~v~~~~---~-~~~~~v~i~~g~I~~ig~~~~~~--~-~~~~~viD~~g~~v~PG~iD~H~H~~~~~---- 75 (390)
T 1onw_A 7 AGFTLLQGAHLYAPE---D-RGICDVLVANGKIIAVASNIPSD--I-VPNCTVVDLSGQILCPGFIDQHVHLIGGG---- 75 (390)
T ss_dssp GCCEEEESCEEESSS---E-EEECEEEEETTEEEEEETTCCTT--S-SSSCEEEECTTCEEEECEEEEEECTTCCB----
T ss_pred cceEEEECcEEECCC---C-CccceEEEECCEEEEEecCcccC--C-CCCCeEEeCCCCEECcCeeEeeECccccC----
Confidence 346789999999854 2 46789999999999998754210 1 12458999999999999999999985311
Q ss_pred cCCCCccccccccccCccCCCChHHHHHHHHHHHHHHHhcCcceeecCCCC-----CH---HHHHHHHHHcCCeEEeecc
Q 022028 98 ADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQ-----HV---SEMAKAVELLGLRACLVQS 169 (304)
Q Consensus 98 ~~~~~~~~~l~~~~~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~d~~~~-----~~---~~~~~~~~~~gir~~~~~~ 169 (304)
....+. . .+++ ..+.+++++|+||++++... .. ....+++.+.|++.+....
T Consensus 76 -~~~~~~---~---------~~~~-------~~~~~~~~~GvTtv~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~g 135 (390)
T 1onw_A 76 -GEAGPT---T---------RTPE-------VALSRLTEAGVTSVVGLLGTDSISRHPESLLAKTRALNEEGISAWMLTG 135 (390)
T ss_dssp -CTTSGG---G---------BCCC-------CCHHHHHHTTEEEEEECCCSCCSSCCHHHHHHHHHHHHHHTSEEEEEEE
T ss_pred -cccccc---c---------cCHH-------HHHHHHHHCCeeEEecCCCcccccCcHHHHHHHHHHHHhcCCceEEecc
Confidence 011110 0 1111 13456789999999987532 12 2345556677888654322
Q ss_pred cccCCCCCCCCcccCChHHHHHHHHHHHHHHcCCCCCCeEEEEeeCcccCCCHHHHHHHHHHHHHhCC------eeeEEe
Q 022028 170 TMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKT------GIHMHV 243 (304)
Q Consensus 170 ~~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~e~l~~~~~~a~~~~~------~~~~H~ 243 (304)
.... +....... +......++.+. +. ++.++++.....+.+.++++.+.+++.+. .+++|+
T Consensus 136 ~~~~----~~~~~~~~----~~~~~~~~~~~~----g~-~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~~~~~g~~~~h~ 202 (390)
T 1onw_A 136 AYHV----PSRTITGS----VEKDVAIIDRVI----GV-KCAISDHRSAAPDVYHLANMAAESRVGGLLGGKPGVTVFHM 202 (390)
T ss_dssp CSCS----SCCCSSSC----HHHHHHHCTTEE----EE-EEEESSTTSCCCCHHHHHHHHHHHHHHHHHHTSCCEEEEEE
T ss_pred ccCC----Cchhhhhh----hcchhhhHHHhh----cc-eeeecCCCCCCCCHHHHHHHHHHHhhhhhhhccCceEEEEe
Confidence 1111 11110111 111112222221 22 55667766667888888888888776543 367898
Q ss_pred cCChhhHHHHHH
Q 022028 244 AEIPYENQVVMD 255 (304)
Q Consensus 244 ~E~~~~~~~~~~ 255 (304)
.++....+...+
T Consensus 203 ~~~~~~~~~~~~ 214 (390)
T 1onw_A 203 GDSKKALQPIYD 214 (390)
T ss_dssp CSCTTTTHHHHH
T ss_pred CCCHHHHHHHHH
Confidence 776665554443
|
| >3ggm_A Uncharacterized protein BT9727_2919; bacillus cereus group., structural genomics, PSI-2, protein structure initiative; 2.00A {Bacillus thuringiensis serovarkonkukian} | Back alignment and structure |
|---|
Probab=99.66 E-value=2.3e-16 Score=109.38 Aligned_cols=70 Identities=24% Similarity=0.372 Sum_probs=56.2
Q ss_pred cccEEEEccEEEecCCCCceeeeeeEEEeCCEEEEecCChhhhhhhcCCCceEEeCCCCEeeccccccCccchh
Q 022028 18 SSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQ 91 (304)
Q Consensus 18 ~~~~li~~~~ii~~~~~~~~~~~~~I~I~~g~I~~i~~~~~~~~~~~~~~~~vID~~g~iv~PG~ID~H~Hl~~ 91 (304)
+.+++|+|++|++++.. ...+++|+|+||||++|++..+.... ..+.++||++|++|+|||||+|+|+..
T Consensus 3 ~~~~li~n~~i~~~~~~--~~~~~~i~I~~g~I~~ig~~~~~~~~--~~~~~viD~~g~~v~PG~ID~H~H~~~ 72 (81)
T 3ggm_A 3 VPDMILYNGKITTLDPS--QPEVSAIAITDGLITAVGGDELLNSA--TEKTKKIDLKRKRAIPGLNDSHIHVIR 72 (81)
T ss_dssp CCSEEEESSEEECSCTT--CSEESEEEEETTEEEEEESGGGGGGC--CTTCEEEECTTCEEEECCCCTTEEEEC
T ss_pred cCCEEEECCEEEeCCCC--CccccEEEEECCEEEEEeCchHhccc--CCCCEEEECCCCEEeeCeEeeeeCCCC
Confidence 56789999999997643 22478999999999999986543211 235689999999999999999999976
|
| >4gy7_A Urease; JACK bean, hydrolase, ME binding, nickel; HET: CME KCX; 1.49A {Canavalia ensiformis} PDB: 3la4_A* 4h9m_A* | Back alignment and structure |
|---|
Probab=99.66 E-value=2.1e-15 Score=146.39 Aligned_cols=81 Identities=22% Similarity=0.289 Sum_probs=60.7
Q ss_pred CCCCCCCCCC-CcccEEEEccEEEecCCCCceeeeeeEEEeCCEEEEecCChhhhh-------hhcCCCceEEeCCCCEe
Q 022028 7 GGGSSSGSLG-SSSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQ-------QFSQMADQIIDLQSQIL 78 (304)
Q Consensus 7 ~~~~~~~~~~-~~~~~li~~~~ii~~~~~~~~~~~~~I~I~~g~I~~i~~~~~~~~-------~~~~~~~~vID~~g~iv 78 (304)
|+++++..+. ...+++|+|++|++.+ .+ .+++|.|+||||++||+...+.. ...+.+.++||++|++|
T Consensus 324 gmgq~~~~~~~~~~DLVItNA~IVD~t---Gi-~kADI~IkDGRIaAIGkagnpD~~dgV~pdl~ig~gtEVIDA~GkiV 399 (840)
T 4gy7_A 324 GMGQSCGHPPAISLDTVITNAVIIDYT---GI-IKADIGIKDGLIASIGKAGNPDIMNGVFSNMIIGANTEVIAGEGLIV 399 (840)
T ss_dssp TTTBCSSSCGGGSCSEEEEEEEEEETT---EE-EEEEEEEETTEEEEEECCBCTTTCSSCCTTSBCCTTCEEEECTTCEE
T ss_pred cCCcCCCCCCcccCCEEEeCeEEECCC---Ce-EEeeEEEECCEEEEEeccCCcccccccccccccCCCCEEEECCCCEE
Confidence 5566655432 3457999999999964 34 57899999999999997532210 01134679999999999
Q ss_pred eccccccCccchh
Q 022028 79 LPGFVNTHVHTSQ 91 (304)
Q Consensus 79 ~PG~ID~H~Hl~~ 91 (304)
+|||||+|+|+..
T Consensus 400 tPGfID~HvHl~~ 412 (840)
T 4gy7_A 400 TAGAIDCHVHYIC 412 (840)
T ss_dssp EECEEEEEEECCC
T ss_pred ccCeeeeccCCCC
Confidence 9999999999843
|
| >1nfg_A D-hydantoinase; TIM barrel, hydrolase; HET: KCX; 2.70A {Ralstonia pickettii} SCOP: b.92.1.3 c.1.9.6 | Back alignment and structure |
|---|
Probab=99.65 E-value=2.3e-16 Score=144.83 Aligned_cols=182 Identities=18% Similarity=0.184 Sum_probs=104.9
Q ss_pred cEEEEccEEEecCCCCceeeeeeEEEeCCEEEEecCChhhhhhhcCCCceEEeCCCCEeeccccccCccchhhhhhcccC
Q 022028 20 TMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIAD 99 (304)
Q Consensus 20 ~~li~~~~ii~~~~~~~~~~~~~I~I~~g~I~~i~~~~~~~~~~~~~~~~vID~~g~iv~PG~ID~H~Hl~~s~~~g~~~ 99 (304)
+++|+|++|++++ .. .+++|+|+||||++|++..+ .+.++||++|++|+|||||+|+|+..+....
T Consensus 2 ~~li~n~~v~~~~---~~-~~~~v~I~~g~I~~ig~~~~-------~~~~viD~~G~~v~PGlID~H~H~~~~~~~~--- 67 (457)
T 1nfg_A 2 DIIIKNGTIVTAD---GI-SRADLGIKDGKITQIGGALG-------PAERTIDAAGRYVFPGGIDVHTHVETVSFNT--- 67 (457)
T ss_dssp CEEEEEEEEEETT---EE-EEEEEEEETTEEEEESSCCC-------CCSEEEECTTCEEEECEEEEEECCSCEETTE---
T ss_pred cEEEEeeEEEeCC---Cc-eeeeEEEECCEEEEecCCCC-------CCCeEEeCCCCEEccceEeeccccccCcCCC---
Confidence 4789999999965 23 57899999999999987531 2458999999999999999999996421100
Q ss_pred CCCccccccccccCccCCCChHHHHHHHHHHHHHHHhcCcceeecCCCC----CHHHHHHHHHHcCC-eEEeecccccCC
Q 022028 100 DVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQ----HVSEMAKAVELLGL-RACLVQSTMDCG 174 (304)
Q Consensus 100 ~~~~~~~l~~~~~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~d~~~~----~~~~~~~~~~~~gi-r~~~~~~~~d~g 174 (304)
+++++++.. ...++++||||++++... .....++...+... +......+.-.+
T Consensus 68 ------------------~~~e~~~~~----~~~~~~~GvTtv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 125 (457)
T 1nfg_A 68 ------------------QSADTFATA----TVAAACGGTTTIVDFCQQDRGHSLAEAVAKWDGMAGGKSAIDYGYHIIV 125 (457)
T ss_dssp ------------------ECSCCHHHH----HHHHHHTTEEEEEEEEECCTTSCHHHHHHHHHHHHTTTCSSEEEEEEEC
T ss_pred ------------------CChhhHHHH----HHHHHhCCcEEEEeCCCCCCCCChHHHHHHHHHHhcccCccCEEEEEee
Confidence 112333332 344678999999986522 11122222211100 110000000011
Q ss_pred CCCCCCcccCChHHHHHHHHHHHHHHcCCCCCCeEEEEeeCcccCCCHHHHHHHHHHHHHhCCeeeEEecCChhhH
Q 022028 175 EGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYEN 250 (304)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~e~l~~~~~~a~~~~~~~~~H~~E~~~~~ 250 (304)
+ .. .. +.. +.++++...+...++..+........+++.+.++++.+++.+..+.+|. |.....
T Consensus 126 ~----~~---~~-~~~----~~~~~~~~~G~~~~k~~~~~~~~~~~~~~~~~~~~~~a~~~~~~v~~H~-e~~~~~ 188 (457)
T 1nfg_A 126 L----DP---TD-SVI----EELEVLPDLGITSFKVFMAYRGMNMIDDVTLLKTLDKAVKTGSLVMVHA-ENGDAA 188 (457)
T ss_dssp S----SC---CH-HHH----HHTTTGGGGTCCEEEEESSSTTTTBCCHHHHHHHHHHHHHHTCEEEEEC-CCHHHH
T ss_pred c----CC---ch-hHH----HHHHHHHHcCCCEEEEeeccCCCCCCCHHHHHHHHHHHHhcCCEEEEeC-CCHHHH
Confidence 1 00 11 211 2222222222234555444332234567778888899999999999996 665443
|
| >3mkv_A Putative amidohydrolase; sargasso SEA, structural genomics, protein structure initiat NEW YORK structural genomix research consortium, nysgxrc; HET: KCX; 2.40A {Undefined} | Back alignment and structure |
|---|
Probab=99.62 E-value=8.9e-16 Score=136.42 Aligned_cols=71 Identities=17% Similarity=0.390 Sum_probs=59.3
Q ss_pred CCcccEEEEccEEEecCCCCceeeeeeEEEeCCEEEEecCChhhhhhhcCCCceEEeCCCCEeeccccccCccchhh
Q 022028 16 GSSSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQ 92 (304)
Q Consensus 16 ~~~~~~li~~~~ii~~~~~~~~~~~~~I~I~~g~I~~i~~~~~~~~~~~~~~~~vID~~g~iv~PG~ID~H~Hl~~s 92 (304)
|+|++++|+|++|++++. .+++++++|+|+||||++|++.... +.+.++||++|++|+|||||+|+|+..+
T Consensus 1 MsM~~lli~ng~i~d~~~-~~~~~~~dV~I~~G~I~~Ig~~~~~-----~~~~~vID~~G~~v~PGfID~H~H~~~~ 71 (426)
T 3mkv_A 1 MSLTTFLFRNGALLDPDH-PDLLQGFEILIEDGFIREVSDKPIK-----SSNAHVIDVKGKTIMPGLIDLHVHVVAI 71 (426)
T ss_dssp --CCEEEEEEEEECCTTS-SSCEEEEEEEEETTEEEEEESSCCC-----CSSCEEEECTTCEEEECEEEEEECTTCC
T ss_pred CCcCcEEEECeEEEeCCC-CcEecCcEEEEECCEEEEecCCCCC-----CCCCEEEECCCCEEEeChhhhhhCcccc
Confidence 357889999999998764 3577899999999999999986542 2367999999999999999999998653
|
| >4ep8_C Urease subunit alpha; alpha-beta barrel, nickel metalloenzyme, hydrolase, radiatio; HET: KCX; 1.55A {Enterobacter aerogenes} PDB: 1ef2_A* 4epb_C* 4epd_C* 4epe_C* 1ejx_C* 1ejw_C* 1fwj_C* 1kra_C 2kau_C* 1a5k_C 1ejv_C* 1ejt_C* 1eju_C* 1ejs_C* 1a5m_C 1a5n_C 1ejr_C* 1a5l_C 1a5o_C 1fwa_C* ... | Back alignment and structure |
|---|
Probab=99.51 E-value=6.2e-15 Score=138.98 Aligned_cols=84 Identities=25% Similarity=0.270 Sum_probs=62.7
Q ss_pred CCCCCCCCCCCcccEEEEccEEEecCCCCceeeeeeEEEeCCEEEEecCChhhhhh-----hcCCCceEEeCCCCEeecc
Q 022028 7 GGGSSSGSLGSSSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQ-----FSQMADQIIDLQSQILLPG 81 (304)
Q Consensus 7 ~~~~~~~~~~~~~~~li~~~~ii~~~~~~~~~~~~~I~I~~g~I~~i~~~~~~~~~-----~~~~~~~vID~~g~iv~PG 81 (304)
|++++........+++|+|++|++.+ .+ .+++|+|+||||++||+..++... ..+.+.++||++|++|+||
T Consensus 53 ~~~~~~~~~~~~~DlvI~Na~Ivd~~---Gi-~kaDIlIkDGrIaaIG~ag~pd~~d~vdl~~~~g~eVIDA~GkiV~PG 128 (566)
T 4ep8_C 53 GMGQGQMLAADCVDLVLTNALIVDHW---GI-VKADIGVKDGRIFAIGKAGNPDIQPNVTIPIGAATEVIAAEGKIVTAG 128 (566)
T ss_dssp TTTBCCCCGGGSCSEEEEEEEEEETT---EE-EEEEEEEETTEEEEEECEECTTTCSSCCEECCTTCEEEECTTCEEEEC
T ss_pred ccCCCCCCCCCCCCEEEECcEEECCC---Ce-EEeEEEEECCEEEEeecCCCcccccccccccCCCCEEEECCCCEEEcC
Confidence 44555443344668999999999864 44 478999999999999975432100 0134679999999999999
Q ss_pred ccccCccchhhhh
Q 022028 82 FVNTHVHTSQQLA 94 (304)
Q Consensus 82 ~ID~H~Hl~~s~~ 94 (304)
|||+|+|+.....
T Consensus 129 ~ID~HvH~~~~~~ 141 (566)
T 4ep8_C 129 GIDTHIHWICPQQ 141 (566)
T ss_dssp EEEEEEECSCTTH
T ss_pred EEEecccccCCCc
Confidence 9999999976544
|
| >2pgf_A Adenosine deaminase; metallo-dependent hydrolase, structural genomics, medical ST genomics of pathogenic protozoa consortium, MSGPP; HET: MSE ADN; 1.89A {Plasmodium vivax} PDB: 2pgr_A* 2qvn_A* 3ewc_A* 3ewd_A* 2amx_A | Back alignment and structure |
|---|
Probab=99.36 E-value=1.1e-12 Score=116.81 Aligned_cols=172 Identities=16% Similarity=0.089 Sum_probs=113.7
Q ss_pred CCCccccccccccCccCCCChHHHHHHHHHHHHHHHhcCccee---ecCC----C--CC----H----HHHHHHHHHc--
Q 022028 100 DVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCF---AEAG----G--QH----V----SEMAKAVELL-- 160 (304)
Q Consensus 100 ~~~~~~~l~~~~~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv---~d~~----~--~~----~----~~~~~~~~~~-- 160 (304)
..++.+|+....+......++++++..++.++.++++.|||++ .+.. . .. . +.+.++.++.
T Consensus 90 ~~~L~~~l~~~~~~~~~~~t~ed~~~~a~~~l~e~~~~GV~y~E~r~dp~~~~~~~gl~~~~~~~a~~~~~~~a~~~~~~ 169 (371)
T 2pgf_A 90 GKSLGEFVEKAIKVADIFHDYEVIEDLAKHAVFNKYKEGVVLMEFRYSPTFVAFKYNLDIELIHQAIVKGIKEVVELLDH 169 (371)
T ss_dssp CSCHHHHHHHHHHHGGGCCSHHHHHHHHHHHHHHHHHHTEEEEEEEECHHHHHTTTTCCHHHHHHHHHHHHHHHHHHTTT
T ss_pred CCCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHCCCEEEEEEECcccccccCCCCHHHHHHHHHHHHHHHHHHccC
Confidence 3466778777666666678899999999999999999999997 3321 1 11 1 2333344567
Q ss_pred CCeEEeecccccCCCCCCCCcccCChHHHHHHHHHHHHHHcCCCCCCeEEEEeeCcccCCCHHHHHHHHHHHHHhCCeee
Q 022028 161 GLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIH 240 (304)
Q Consensus 161 gir~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~e~l~~~~~~a~~~~~~~~ 240 (304)
|++..+...+... .+++ ...+.++ ....+ .++ .+++.+.+.+.. ++.++.+++.|+++|+++.
T Consensus 170 gi~~~li~~~~r~---~~~~----~~~~~~~----~a~~~---~~~--vvg~dl~g~e~~-~~~~~~~~~~A~~~gl~~~ 232 (371)
T 2pgf_A 170 KIHVALMCIGDTG---HEAA----NIKASAD----FCLKH---KAD--FVGFDHGGHEVD-LKEYKEIFDYVRESGVPLS 232 (371)
T ss_dssp SSEEEEEEEEEES---STTC----CHHHHHH----HHHHT---TTT--EEEEEEEESCCC-GGGGHHHHHHHHHTTCCBE
T ss_pred CCEEEEEEEecCC---CCHH----HHHHHHH----HHHhC---CCC--EEEEecCCCccc-HHHHHHHHHHHHHcCCcEE
Confidence 8887555444321 1221 2223322 22221 122 345666677666 7889999999999999999
Q ss_pred EEecCChhhHHHHHHhcCCCCCH-HHHHHHhCCCCCCeeEEEeccCCcch--hc-----------cccccccccc
Q 022028 241 MHVAEIPYENQVVMDTRKVDHGT-VTFLDKIEFLQNNLLSAHTVWVNHTE--VN-----------CTFGNFKYAV 301 (304)
Q Consensus 241 ~H~~E~~~~~~~~~~~~g~~~~~-~~~l~~~g~l~~~~~~~H~~~l~~~d--i~-----------~p~sN~~l~~ 301 (304)
+|++|+.. | .+ ....+..++++++ .+.||+++++++ ++ ||.||.++++
T Consensus 233 ~HagE~~~---------~---~~~~~i~~al~~lg~~-ri~Hgv~l~~~~~l~~~l~~~~i~v~~cP~SN~~l~~ 294 (371)
T 2pgf_A 233 VHAGEDVT---------L---PNLNTLYSAIQVLKVE-RIGHGIRVAESQELIDMVKEKNILLEVCPISNVLLKN 294 (371)
T ss_dssp EEESCCTT---------S---SSSHHHHHHHHTSCCS-EEEECGGGGGCHHHHHHHHHTTCEEEECHHHHHHTTS
T ss_pred EeeCCCCC---------C---CchHHHHHHHhccCCC-EEecchhccccHHHHHHHHHcCCeEEECcchhHHhCC
Confidence 99999841 1 02 2333445566766 699999999887 54 9999999875
|
| >3pao_A Adenosine deaminase; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; HET: ADE; 2.49A {Pseudomonas aeruginosa} PDB: 3pan_A* 3ou8_A* 3pbm_A* | Back alignment and structure |
|---|
Probab=98.97 E-value=2.2e-09 Score=93.47 Aligned_cols=170 Identities=18% Similarity=0.132 Sum_probs=101.1
Q ss_pred CccccccccccCccCCCChHHHHHHHHHHHHHHHhcCccee---ecC-----CCCCHH--------HHHHHHHHcCCeEE
Q 022028 102 DLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCF---AEA-----GGQHVS--------EMAKAVELLGLRAC 165 (304)
Q Consensus 102 ~~~~~l~~~~~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv---~d~-----~~~~~~--------~~~~~~~~~gir~~ 165 (304)
++.+++..+.+...-..++++++..+...+.++.+.||+.+ .+. .+...+ .+.++.++.|++..
T Consensus 55 ~l~~fl~~~~~~~~vl~t~ed~~~~a~~~~~~~~~dgV~y~Eir~~P~~~~~~gl~~~~~v~~v~~~~~~a~~~~gi~~~ 134 (326)
T 3pao_A 55 NLQEFLDLYYAGADVLRTEQDFYDLTWAYLQKCKAQNVVHVEPFFDPQTHTDRGIPFEVVLAGIRAALRDGEKLLGIRHG 134 (326)
T ss_dssp SHHHHHHHHHHHGGGCCSHHHHHHHHHHHHHHHHHTTEEEECCEECHHHHHTTTCCHHHHHHHHHHHHHHHHHHHCCEEC
T ss_pred CHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcCCeEEEEEEChHHhccCCCCHHHHHHHHHHHHHHHHhhCceEEE
Confidence 44455554444444556788999999999999999999986 211 111122 22334455677553
Q ss_pred eecccccCCCCCCCCcccCChHHHHHHHHHHHHHHcCCCCCCeEEEEeeCcccCCCHHHHHHHHHHHHHhCCeeeEEecC
Q 022028 166 LVQSTMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAE 245 (304)
Q Consensus 166 ~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~e~l~~~~~~a~~~~~~~~~H~~E 245 (304)
+-..++.. . .++. ..+..++...+.+ ..+.+.++- .....+++.++.+++.|++.|+++.+|++|
T Consensus 135 lI~~~~R~---~-------~~~~-a~~~~~~a~~~~~---~vvG~dL~g-~E~~~~~~~~~~~~~~A~~~gl~~~~HagE 199 (326)
T 3pao_A 135 LILSFLRH---L-------SEEQ-AQKTLDQALPFRD---AFIAVGLDS-SEVGHPPSKFQRVFDRARSEGFLTVAHAGE 199 (326)
T ss_dssp CEEEEETT---S-------CHHH-HHHHHHHHGGGGG---GCSEEEEES-CCTTCCGGGGHHHHHHHHHTTCEECEEESS
T ss_pred EEEEeCCC---C-------CHHH-HHHHHHHHhhccc---cceeeCCCC-CCCCCCHHHHHHHHHHHHHcCCceeeecCC
Confidence 32222211 1 1222 2233333334432 333333331 123456778889999999999999999999
Q ss_pred ChhhHHHHHHhcCCCCCHHHHHHHhCCCCCCeeEEEeccCCcc--hhc-----------cccccccccc
Q 022028 246 IPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHT--EVN-----------CTFGNFKYAV 301 (304)
Q Consensus 246 ~~~~~~~~~~~~g~~~~~~~~l~~~g~l~~~~~~~H~~~l~~~--di~-----------~p~sN~~l~~ 301 (304)
+..... ..+..++|+.+ -+.||++++++ +++ ||.||.++++
T Consensus 200 ~~~~~~--------------i~~al~~lg~~-rigHgv~l~~d~~l~~~l~~~~i~le~cP~SN~~l~~ 253 (326)
T 3pao_A 200 EGPPEY--------------IWEALDLLKVE-RIDHGVRAFEDERLMRRLIDEQIPLTVCPLSNTKLCV 253 (326)
T ss_dssp SSCHHH--------------HHHHHHTTCCS-SEEECGGGGGCHHHHHHHHHHTCCEEECHHHHHHTTS
T ss_pred CCCHHH--------------HHHHHhcCCCc-eeeeeeeecccHHHHHHHHHcCCeEEECchhHHHhCC
Confidence 864221 12233445544 37999999954 554 9999999975
|
| >3rys_A Adenosine deaminase 1; SGX, hydrolase; HET: ADE; 2.60A {Arthrobacter aurescens} SCOP: c.1.9.0 | Back alignment and structure |
|---|
Probab=98.88 E-value=1.5e-08 Score=88.84 Aligned_cols=169 Identities=14% Similarity=0.080 Sum_probs=99.2
Q ss_pred ccccccccccCccCCCChHHHHHHHHHHHHHHHhcCcceee---cC-----CCCCHHH----HHH----HHHHcCCeEEe
Q 022028 103 LMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFA---EA-----GGQHVSE----MAK----AVELLGLRACL 166 (304)
Q Consensus 103 ~~~~l~~~~~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~---d~-----~~~~~~~----~~~----~~~~~gir~~~ 166 (304)
+.+++....+...-..++++++..+...+.++.+.||..+- +. .+...+. +.+ +.++.|++..+
T Consensus 59 l~~fl~~f~~~~~vl~~~e~~~~~~~~~l~~~~~dgV~y~Eir~~P~~~~~~gl~~~~~v~~v~~~~~~a~~~~gi~~~l 138 (343)
T 3rys_A 59 LQSFLDLYYANMAVLQTEQDFTDMTRAYLERAAAGGVRHAEIMMDPQAHTSRGVALETCVNGVANALATSEEDFGVSTLL 138 (343)
T ss_dssp HHHHHHHHHHHGGGCCSHHHHHHHHHHHHHHHHHTTEEEEEEEECHHHHHTTTCCHHHHHHHHHHHHTTHHHHHSCEEEE
T ss_pred HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHCCCEEEEEEecHHHhccCCCCHHHHHHHHHHHHHHHhhcCceeEEE
Confidence 33444433332333457888999999999999999999872 11 1112222 222 33455765543
Q ss_pred ecccccCCCCCCCCcccCChHHHHHHHHHHHHHHcCCCCCCeEEEEeeCcccCCCHHHHHHHHHHHHHhCCeeeEEecCC
Q 022028 167 VQSTMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEI 246 (304)
Q Consensus 167 ~~~~~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~e~l~~~~~~a~~~~~~~~~H~~E~ 246 (304)
-..++.. . .++.. .+..++...+ .+..+.+.++- .....+++.++.+++.|++.|+++.+|++|+
T Consensus 139 I~~~~R~---~-------~~~~a-~~~l~~a~~~---~~~vvG~dL~g-~E~~~~~~~~~~~~~~A~~~gl~~~~HagE~ 203 (343)
T 3rys_A 139 IAAFLRD---M-------SEDSA-LEVLDQLLAM---HAPIAGIGLDS-AEVGNPPSKFERLYQRAAEAGLRRIAHAGEE 203 (343)
T ss_dssp EEEEETT---S-------CHHHH-HHHHHHHHHT---TCCCCEEEEES-CCTTCCGGGGHHHHHHHHHTTCEEEEEESSS
T ss_pred EEEeCCC---C-------CHHHH-HHHHHHHHhC---CCCEEEEecCC-cccCCCHHHHHHHHHHHHHCCCeEEEeeCCC
Confidence 3333211 1 12222 2333333334 23444444432 2245577888999999999999999999998
Q ss_pred hhhHHHHHHhcCCCCCHHHHHHHhCCCCCCeeEEEeccCCc--chhc-----------cccccccccc
Q 022028 247 PYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNH--TEVN-----------CTFGNFKYAV 301 (304)
Q Consensus 247 ~~~~~~~~~~~g~~~~~~~~l~~~g~l~~~~~~~H~~~l~~--~di~-----------~p~sN~~l~~ 301 (304)
.... ...+..++++.+ -+.||+++++ ++++ ||.||.++++
T Consensus 204 ~~~~--------------~i~~al~~lg~~-rIgHgv~l~~d~~l~~~l~~~~i~le~cP~SN~~l~~ 256 (343)
T 3rys_A 204 GPAS--------------YITEALDVLHVE-RIDHGIRCMEDTDVVQRLVAEQVPLTVCPLSNVRLRA 256 (343)
T ss_dssp SCHH--------------HHHHHHHTSCCS-EEEECGGGGGCHHHHHHHHHHTCCEEECHHHHHHTTS
T ss_pred CCHH--------------HHHHHHhcCCcc-eeeeeeeecCChHHHHHHHhcCCCeeEchhHHHHhCC
Confidence 6422 112234445554 4899999985 3444 9999999986
|
| >2vc7_A Aryldialkylphosphatase; phosphotriesterase, promiscuous activities, enzyme evolution, hyperthermophilic, lactonase, hydrolase; HET: KCX GOL HT5; 2.05A {Sulfolobus solfataricus} PDB: 2vc5_A* | Back alignment and structure |
|---|
Probab=98.69 E-value=3.9e-07 Score=79.07 Aligned_cols=179 Identities=14% Similarity=0.073 Sum_probs=96.2
Q ss_pred cccccCccchhhhhhcccCCCCccccccccccCccCCCChHHHHHHHHHHHHHHHhcCcceeecCCCC----CHHHHHHH
Q 022028 81 GFVNTHVHTSQQLAKGIADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQ----HVSEMAKA 156 (304)
Q Consensus 81 G~ID~H~Hl~~s~~~g~~~~~~~~~~l~~~~~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~d~~~~----~~~~~~~~ 156 (304)
||||+|+|+.....+....+. ..| ..+ .+ ...+...+.++.++|||++++.+.. ....+.+.
T Consensus 17 G~iD~H~Hl~~~~~~~~~~~~--~~~---------~~~--~~-~~~~~~~l~~~~~~Gv~~iv~~~~~~~~~~~~~~~~~ 82 (314)
T 2vc7_A 17 GFTLIHEHLRVFSEAVRQQWP--HLY---------NED--EE-FRNAVNEVKRAMQFGVKTIVDPTVMGLGRDIRFMEKV 82 (314)
T ss_dssp CSEESSCBSCBCCHHHHHHCG--GGC---------CHH--HH-HHHHHHHHHHHHHTTCCEEEECCCBTTTCCHHHHHHH
T ss_pred CCcccccccccCcchhcccCc--chh---------hhc--cc-HHHHHHHHHHHHHcCCCEEEecCCCCCCcCHHHHHHH
Confidence 999999999753221100000 012 011 11 2344555677889999999887632 35666777
Q ss_pred HHHcCCeEEeecccccCCCCCCCCcc-cCChHHHHHHHHHHHHHH--cCC-----CCCCeEEEEeeCcccCCCHHHHHHH
Q 022028 157 VELLGLRACLVQSTMDCGEGLPASWA-VRTTDDCIQSQKELYAKH--HHA-----ADGRIRIWFGIRQIMNATDRLLLET 228 (304)
Q Consensus 157 ~~~~gir~~~~~~~~d~g~~~~~~~~-~~~~~~~~~~~~~~~~~~--~~~-----~~~~i~~~~~~~~~~~~~~e~l~~~ 228 (304)
+++.|++.+.+..+.... ..+.+. ... ++...++++.. ... ..+.+++.+..........+.+++.
T Consensus 83 ~~~~~~~v~~~~G~hp~~--~~~~~~~~~~----~~~l~~~~~~~~~~gige~G~~~g~i~~~ld~~~~~~~q~~~~~~~ 156 (314)
T 2vc7_A 83 VKATGINLVAGTGIYIYI--DLPFYFLNRS----IDEIADLFIHDIKEGIQGTLNKAGFVKIAADEPGITKDVEKVIRAA 156 (314)
T ss_dssp HHHHCCEEEECEEBCCSS--CCCGGGTTCC----HHHHHHHHHHHHHTCSSSSSCCCCSEEEECCTTCSCHHHHHHHHHH
T ss_pred HHHcCCeEEEEeecCCCC--CCchhhhccC----HHHHHHHHHHHHHhhcccCCCCCCeEEEeecCCCCCHHHHHHHHHH
Confidence 788888776443322110 001111 111 12222222221 111 1234444444432222223457788
Q ss_pred HHHHHHhCCeeeEEecC-ChhhHHHHHHhcCCCCCHHHHHHHhCCCCCCeeEEEeccC-Ccchh
Q 022028 229 RDMAREFKTGIHMHVAE-IPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWV-NHTEV 290 (304)
Q Consensus 229 ~~~a~~~~~~~~~H~~E-~~~~~~~~~~~~g~~~~~~~~l~~~g~l~~~~~~~H~~~l-~~~di 290 (304)
.++|+++++++.+|+.+ .....+ .++.+++.|+...++++.||... +.++.
T Consensus 157 ~~lA~~~~~pv~iH~~~~~~~~~~-----------~~~~l~~~~~~~~~~~i~H~~~~~~~~~~ 209 (314)
T 2vc7_A 157 AIANKETKVPIITHSNAHNNTGLE-----------QQRILTEEGVDPGKILIGHLGDTDNIDYI 209 (314)
T ss_dssp HHHHHHHCCCEEEECCTTTTHHHH-----------HHHHHHHTTCCGGGEEETTGGGCCCHHHH
T ss_pred HHHHHHHCCEEEEeCCCcccChHH-----------HHHHHHHcCCCcccEEEECCCCCCCHHHH
Confidence 99999999999999863 122111 56777777875557788899863 44433
|
| >3iar_A Adenosine deaminase; purine metabolism structural genomics, structural genomics consortium, SGC, D mutation, hereditary hemolytic anemia, hydrolase; HET: 3D1; 1.52A {Homo sapiens} SCOP: c.1.9.1 PDB: 2bgn_E* 1w1i_E* 1qxl_A* 1krm_A* 1vfl_A 1ndv_A* 1ndy_A* 1ndz_A* 1o5r_A* 1uml_A* 1v79_A* 1v7a_A* 1ndw_A 1wxy_A* 1wxz_A* 2e1w_A* 2z7g_A* 2ada_A* 3mvi_A 1a4l_A* ... | Back alignment and structure |
|---|
Probab=98.52 E-value=1.1e-06 Score=77.50 Aligned_cols=152 Identities=12% Similarity=0.074 Sum_probs=90.9
Q ss_pred ChHHHHHHHHHHHHHHHhcCcceee---cC---C--------------CCCHHH----HH----HHHHHcCCeEEeeccc
Q 022028 119 TEEDSYISTLLCGIELIHSGVTCFA---EA---G--------------GQHVSE----MA----KAVELLGLRACLVQST 170 (304)
Q Consensus 119 ~~e~~~~~~~~~~~~~l~~GvTtv~---d~---~--------------~~~~~~----~~----~~~~~~gir~~~~~~~ 170 (304)
++++++..+...+.++.+.||..+- +. . +...+. +. ++..+.|+..-+-..+
T Consensus 72 ~~edl~~~a~e~~ed~a~dgV~Y~Eir~~P~~~~~~~~~~~~~~~~~~gl~~~~vv~~v~~~~~~a~~~~gi~~~lI~~~ 151 (367)
T 3iar_A 72 CREAIKRIAYEFVEMKAKEGVVYVEVRYSPHLLANSKVEPIPWNQAEGDLTPDEVVALVGQGLQEGERDFGVKARSILCC 151 (367)
T ss_dssp CHHHHHHHHHHHHHHHHTTTEEEEEEEECGGGGCSSSCSSCGGGCCCCSCCHHHHHHHHHHHHHHHHHHHCCEEEEEEEE
T ss_pred CHHHHHHHHHHHHHHHHHcCCEEEEEEecHHHhhhccccccccccccCCCCHHHHHHHHHHHHHHHHHhcCCeEEEEEEe
Confidence 5788998899999999999999862 11 0 112222 22 2334457665332222
Q ss_pred ccCCCCCCCCcccCChHHHHHHHHHHHHHHcCCCCCCeEEEEeeCccc-CCCH---HHHHHHHHHHHHhCCeeeEEecCC
Q 022028 171 MDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIM-NATD---RLLLETRDMAREFKTGIHMHVAEI 246 (304)
Q Consensus 171 ~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~---e~l~~~~~~a~~~~~~~~~H~~E~ 246 (304)
+-. .+ . .. .+..++...+.. ++.+ ++...+.. ..++ +.+..+++.|++.|+++.+|++|+
T Consensus 152 ~R~---~~-~-------~a-~e~~~la~~~~~--~~vv--G~dL~g~E~~~~~~~~~~f~~~f~~A~~~gl~~~~HagE~ 215 (367)
T 3iar_A 152 MRH---QP-N-------WS-PKVVELCKKYQQ--QTVV--AIDLAGDETIPGSSLLPGHVQAYQEAVKSGIHRTVHAGEV 215 (367)
T ss_dssp ETT---CG-G-------GH-HHHHHHHHHTTT--TTEE--EEEEESCTTSTTGGGCHHHHHHHHHHHHHTCEEEEEESSS
T ss_pred CCC---CC-H-------HH-HHHHHHHHhhCC--CCEE--EEcCCCcccCCCcchHHHHHHHHHHHHHcCCeeEEecCCc
Confidence 211 11 1 11 233444444432 2333 44443432 2343 678889999999999999999998
Q ss_pred hhhHHHHHHhcCCCCCHHHHHHHhCCCCCCeeEEEeccCCc--chhc-----------cccccccccc
Q 022028 247 PYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNH--TEVN-----------CTFGNFKYAV 301 (304)
Q Consensus 247 ~~~~~~~~~~~g~~~~~~~~l~~~g~l~~~~~~~H~~~l~~--~di~-----------~p~sN~~l~~ 301 (304)
..... ..+..++++.+ -+.||+++.+ +.++ ||.||.++++
T Consensus 216 ~~~~~--------------i~~al~~lg~~-RIgHgv~l~~d~~l~~~l~~~~i~le~cP~SN~~l~~ 268 (367)
T 3iar_A 216 GSAEV--------------VKEAVDILKTE-RLGHGYHTLEDQALYNRLRQENMHFEICPWSSYLTGA 268 (367)
T ss_dssp SCHHH--------------HHHHHHTSCCS-EEEECGGGGGCHHHHHHHHHTTCEEEECHHHHHHTSS
T ss_pred CChHH--------------HHHHHHccCCc-eeeeeeeecCCHHHHHHHHhCCcEEEECHHHHHHhCC
Confidence 75322 11233345544 4899999975 3444 9999999975
|
| >2ob3_A Parathion hydrolase; metalloenzyme, TIM barrel, nerve agents; HET: KCX BTB; 1.04A {Brevundimonas diminuta} PDB: 1psc_A* 1jgm_A* 3cak_A* 1ez2_A* 1eyw_A* 1hzy_A 1i0b_A 1i0d_A 1p6b_A* 1p6c_A* 2oql_A* 2o4q_A* 3cs2_A* 3e3h_A* 1qw7_A* 1dpm_A* 2o4m_A* 1pta_A 3c86_A* 2d2j_A ... | Back alignment and structure |
|---|
Probab=98.34 E-value=5.8e-06 Score=72.22 Aligned_cols=144 Identities=13% Similarity=0.030 Sum_probs=75.0
Q ss_pred HHHHHHHhcCcceeecCCC----CCHHHHHHHHHHcCCeEEeecccccCCCCCCCCcccCChHHHHHHHHHHHHHHcC-C
Q 022028 129 LCGIELIHSGVTCFAEAGG----QHVSEMAKAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYAKHHH-A 203 (304)
Q Consensus 129 ~~~~~~l~~GvTtv~d~~~----~~~~~~~~~~~~~gir~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 203 (304)
..+.++.++|||++++.+. .....+.+.++..+++.+.+..+.- ..|........++..+...+.+..... .
T Consensus 51 ~~l~~~~~aGV~~iv~~~~~~~~~~~~~~~~la~~~~~~i~~~~G~hp---~~p~~~~~~~~~~l~~~l~~~~~~gi~~~ 127 (330)
T 2ob3_A 51 RGLRRARAAGVRTIVDVSTFDIGRDVSLLAEVSRAADVHIVAATGLWF---DPPLSMRLRSVEELTQFFLREIQYGIEDT 127 (330)
T ss_dssp HHHHHHHHTTCCEEEECCCGGGTCCHHHHHHHHHHHTCEEECEEECCS---CCCHHHHTCCHHHHHHHHHHHHHTCSTTS
T ss_pred HHHHHHHHcCCCEEEeCCCCCcCCCHHHHHHHHHHhCCcEEEEecCCc---CCCchhccCCHHHHHHHHHHHHHhhcccc
Confidence 3456788999999998764 2355666667777766543322210 011111111111111222222211111 1
Q ss_pred --CCCCeEEEEeeCcccCCCHHH---HHHHHHHHHHhCCeeeEEec-CChhhHHHHHHhcCCCCCHHHHHHHhCCCCCCe
Q 022028 204 --ADGRIRIWFGIRQIMNATDRL---LLETRDMAREFKTGIHMHVA-EIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNL 277 (304)
Q Consensus 204 --~~~~i~~~~~~~~~~~~~~e~---l~~~~~~a~~~~~~~~~H~~-E~~~~~~~~~~~~g~~~~~~~~l~~~g~l~~~~ 277 (304)
..+.+.+++. +..++.+ +++..++|++.|+++.+|.. .+....+ .++.|++.|.-..++
T Consensus 128 ~~k~~aiEiGld----~~~~~~q~~~f~~q~~lA~~~glPv~iH~~~~~r~a~e-----------~l~iL~~~g~~~~~~ 192 (330)
T 2ob3_A 128 GIRAGIIKVATT----GKATPFQELVLKAAARASLATGVPVTTHTAASQRDGEQ-----------QAAIFESEGLSPSRV 192 (330)
T ss_dssp CCCCSEEEEECS----SSCCHHHHHHHHHHHHHHHHHCCCEEEECCGGGTHHHH-----------HHHHHHHTTCCGGGE
T ss_pred ccceeEEEEeCC----CCCCHHHHHHHHHHHHHHHHhCCeEEEECCCCCCCHHH-----------HHHHHHHcCcCcccE
Confidence 1122344443 2334554 77889999999999999974 1222111 466677767522355
Q ss_pred eEEEec-cCCcchh
Q 022028 278 LSAHTV-WVNHTEV 290 (304)
Q Consensus 278 ~~~H~~-~l~~~di 290 (304)
.+.||. ..+.+..
T Consensus 193 ~i~H~f~~~~~e~a 206 (330)
T 2ob3_A 193 CIGHSDDTDDLSYL 206 (330)
T ss_dssp EECSGGGCCCHHHH
T ss_pred EEeCCCCCCCHHHH
Confidence 788998 4554333
|
| >3tn4_A Phosphotriesterase; lactonase, hydrolase; HET: KCX; 1.50A {Geobacillus kaustophilus} PDB: 3tnb_A* 3tn3_A* 3tn5_A* 3tn6_A* 3ojg_A* 3orw_A* 3f4c_A* 3f4d_A* | Back alignment and structure |
|---|
Probab=98.20 E-value=3e-05 Score=68.16 Aligned_cols=184 Identities=14% Similarity=0.111 Sum_probs=100.7
Q ss_pred cccccCccchhhhhhcccCCCCccccccccccCccCCCChHHHHHHHHHHHHHHHhcCcceeecCCC----CCHHHHHHH
Q 022028 81 GFVNTHVHTSQQLAKGIADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGG----QHVSEMAKA 156 (304)
Q Consensus 81 G~ID~H~Hl~~s~~~g~~~~~~~~~~l~~~~~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~d~~~----~~~~~~~~~ 156 (304)
|++.+|=|+.... .+...+.+ ...+..++....+...+.++-..|+.|++|... .....+.+.
T Consensus 52 G~tl~HEHl~~~~-~~~~~~~~------------~~~~~~~~~~~~~~~~l~~~k~~Gg~tIVd~T~~g~GRd~~~l~~i 118 (360)
T 3tn4_A 52 GKTLIHEHFLFGY-PGFQGDVT------------RGTFREDESLRVAVEAAEKMKRHGIQTVVDPTPNDCGRNPAFLRRV 118 (360)
T ss_dssp CSEESSCEEEECC-TTGGGGTT------------TSCCCHHHHHHHHHHHHHHHHHTTCCEEEECCCTTTTCCHHHHHHH
T ss_pred CCceeccCeeecC-hhhhcccc------------cchhhhhhHHHHHHHHHHHHHhcCCCeEEECCCCCcCcCHHHHHHH
Confidence 8999999986421 11000000 011223333444555567778899999998754 457788888
Q ss_pred HHHcCCeEEeecccccCCCCCCCCcc------cCChHHHHHHHHHHHHHHcC---CCCCCeEEEEeeCcccCCCHHHHHH
Q 022028 157 VELLGLRACLVQSTMDCGEGLPASWA------VRTTDDCIQSQKELYAKHHH---AADGRIRIWFGIRQIMNATDRLLLE 227 (304)
Q Consensus 157 ~~~~gir~~~~~~~~d~g~~~~~~~~------~~~~~~~~~~~~~~~~~~~~---~~~~~i~~~~~~~~~~~~~~e~l~~ 227 (304)
.++.|++.+.+-.+.-.+. .++.+. ....++..+...+.+....+ ...|.|+.+.........-++.+++
T Consensus 119 s~~tGv~IV~~TG~y~~~~-~~p~~~~~~~~~~~~~e~l~~~~i~Ei~~Gi~~tgikaG~I~~~~~~~~~t~~E~k~frA 197 (360)
T 3tn4_A 119 AEETGLNIICATGYYYEGE-GAPPYFQFRRLLGTAEDDIYDMFMAELTEGIADTGIKAGVIKLASSKGRITEYEKMFFRA 197 (360)
T ss_dssp HHHHCCEEEEEECCCCGGG-SCTHHHHHHHHHTCHHHHHHHHHHHHHHTCSTTSCCCCSEEEEECBTTBCCHHHHHHHHH
T ss_pred HHHcCCCEEEeCccccCcc-cCCcccchhhhcccCHHHHHHHHHHHHHhccccCCCcceEEEEEccCCCCCHHHHHHHHH
Confidence 9999999976644332111 111111 01111222222222222211 2235555443322221222336889
Q ss_pred HHHHHHHhCCeeeEEecCChhhHHHHHHhcCCCCCHHHHHHHhCCCCCCeeEEEeccCCcch
Q 022028 228 TRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTE 289 (304)
Q Consensus 228 ~~~~a~~~~~~~~~H~~E~~~~~~~~~~~~g~~~~~~~~l~~~g~l~~~~~~~H~~~l~~~d 289 (304)
..+++++.|+++.+|..+.....+ .++.|.+.|+--+++++.|++.-++.+
T Consensus 198 ~a~aa~etG~Pv~iHt~~~~~~~e-----------~l~iL~eeG~~~~~vvi~H~~~~~d~~ 248 (360)
T 3tn4_A 198 AARAQKETGAVIITHTQEGTMGPE-----------QAAYLLEHGADPKKIVIGHMCDNTDPD 248 (360)
T ss_dssp HHHHHHHHCCEEEEECSTTCCHHH-----------HHHHHHHTTCCGGGEEECCGGGCCCHH
T ss_pred HHHHHHHhCCcEEEEcCcccCCHH-----------HHHHHHHcCCCCCceEEEcCCCCCCHH
Confidence 999999999999999866543222 356677888755688889954444333
|
| >1bf6_A Phosphotriesterase homology protein; hypothetical protein; 1.70A {Escherichia coli} SCOP: c.1.9.3 | Back alignment and structure |
|---|
Probab=98.16 E-value=1.7e-05 Score=67.63 Aligned_cols=150 Identities=11% Similarity=0.051 Sum_probs=73.4
Q ss_pred HHHHHHHHhcCcceeecCCCC----CHHHHHHHHHHcCCeEEeecccccCCCCCCCCcccCChHHHHHHHHHHHHHHcCC
Q 022028 128 LLCGIELIHSGVTCFAEAGGQ----HVSEMAKAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHA 203 (304)
Q Consensus 128 ~~~~~~~l~~GvTtv~d~~~~----~~~~~~~~~~~~gir~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (304)
...+..+.+.|+|++++.+.. ..+...+.++..|++.+.+..+...+ ..|........++..+..++.++.....
T Consensus 36 ~~~~~~~~~~Gv~~iv~~~~~~~~~~~~~~~~~~~~~~~~v~~~~G~~~~~-~hP~~~~~~~~~~l~~~~~~~l~~gi~~ 114 (291)
T 1bf6_A 36 CQEMNDLMTRGVRNVIEMTNRYMGRNAQFMLDVMRETGINVVACTGYYQDA-FFPEHVATRSVQELAQEMVDEIEQGIDG 114 (291)
T ss_dssp HHHHHHHHHTTEEEEEECCCGGGTCCHHHHHHHHHHHCCEEEEEECCCCGG-GCCTHHHHSCHHHHHHHHHHHHHTCSTT
T ss_pred HHHHHHHHHcCCCEEEecCCCcCCCCHHHHHHHHHhcCCeEEEeeccccCc-cCcHhhhcCCHHHHHHHHHHHHHhccCC
Confidence 334556778999999887642 24556666677777665432221100 0111101111111112222222221000
Q ss_pred CCCCeEEEEeeCcc--cCCCH---HHHHHHHHHHHHhCCeeeEEecCChhhHHHHHHhcCCCCCHHHHHHHhCCCCCCee
Q 022028 204 ADGRIRIWFGIRQI--MNATD---RLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLL 278 (304)
Q Consensus 204 ~~~~i~~~~~~~~~--~~~~~---e~l~~~~~~a~~~~~~~~~H~~E~~~~~~~~~~~~g~~~~~~~~l~~~g~l~~~~~ 278 (304)
..-.+. .++-.+. +..++ +.+++..++|+++|+++.+|........+ .++.+.+.|+...+++
T Consensus 115 ~~~~~~-~iGe~gld~~~~~~~~~~~~~~~~~~a~~~~~pv~iH~~~~~~~~~-----------~~~~l~~~~~~~~~~~ 182 (291)
T 1bf6_A 115 TELKAG-IIAEIGTSEGKITPLEEKVFIAAALAHNQTGRPISTHTSFSTMGLE-----------QLALLQAHGVDLSRVT 182 (291)
T ss_dssp SSCCEE-EEEEEECBTTBCCHHHHHHHHHHHHHHHHHCCCEEEECGGGCSHHH-----------HHHHHHHTTCCGGGEE
T ss_pred cCccee-eEEEEecCCCCCCHHHHHHHHHHHHHHHHHCCeEEEeCCCCCChHH-----------HHHHHHHcCCCchhEE
Confidence 001111 1221111 12233 45888999999999999999842111111 4566666676444678
Q ss_pred EEEecc-CCcchh
Q 022028 279 SAHTVW-VNHTEV 290 (304)
Q Consensus 279 ~~H~~~-l~~~di 290 (304)
+.||.. .+.+.+
T Consensus 183 i~H~~~~~~~~~~ 195 (291)
T 1bf6_A 183 VGHCDLKDNLDNI 195 (291)
T ss_dssp ECCCCSSCCHHHH
T ss_pred EECCCCCCCHHHH
Confidence 889854 444443
|
| >2z26_A Dihydroorotase, dhoase; TIM barrel, hydrolase; HET: KCX DOR NCD; 1.29A {Escherichia coli} PDB: 2z24_A* 2z25_A* 2eg6_A* 1xge_A* 2eg7_A* 2eg8_A* 2z27_A* 2e25_A* 2z28_A* 2z29_A* 3mjm_A* 2z2a_A* 1j79_A* 2z2b_A* 3ihn_A* 3jze_A* | Back alignment and structure |
|---|
Probab=98.06 E-value=1.9e-05 Score=69.42 Aligned_cols=25 Identities=4% Similarity=0.074 Sum_probs=21.6
Q ss_pred CCHHHHHHHHHHHHHhCCeeeEEec
Q 022028 220 ATDRLLLETRDMAREFKTGIHMHVA 244 (304)
Q Consensus 220 ~~~e~l~~~~~~a~~~~~~~~~H~~ 244 (304)
.+.+.+..+++.+++.+.++.+|+-
T Consensus 117 ~~~~~l~~~~~~~~~~~~~v~vH~e 141 (347)
T 2z26_A 117 TSVDAIMPVLERMEKIGMPLLVHGE 141 (347)
T ss_dssp SCGGGGHHHHHHHHHHTCCEEECCC
T ss_pred CCHHHHHHHHHHHHHhCCEEEEEec
Confidence 3667788899999999999999974
|
| >3pnu_A Dihydroorotase; TIM barrel, zinc binding, hydrolase, structu genomics, center for structural genomics of infectious DISE csgid; HET: KCX; 2.40A {Campylobacter jejuni subsp} | Back alignment and structure |
|---|
Probab=98.06 E-value=3.3e-05 Score=68.04 Aligned_cols=69 Identities=10% Similarity=0.063 Sum_probs=41.4
Q ss_pred CHHHHHHHHHHHHHhCCeeeEEecCChhh--------HH---HHHHhc-CCC--------CCHHHHHHHhCCCCCCeeEE
Q 022028 221 TDRLLLETRDMAREFKTGIHMHVAEIPYE--------NQ---VVMDTR-KVD--------HGTVTFLDKIEFLQNNLLSA 280 (304)
Q Consensus 221 ~~e~l~~~~~~a~~~~~~~~~H~~E~~~~--------~~---~~~~~~-g~~--------~~~~~~l~~~g~l~~~~~~~ 280 (304)
+.+.+.++++.+++.|.++.+|+ |..+. .. ...+.+ |.. ...++.+++. +----.++.
T Consensus 134 ~~~~l~~~l~~~~~~g~~v~vHa-Ed~~~i~~~E~~ai~r~~~la~~~~g~~lhi~HvSt~~~v~~I~~A-~~VtaEv~p 211 (359)
T 3pnu_A 134 DIEYLKPTLEAMSDLNIPLLVHG-ETNDFVMDRESNFAKIYEKLAKHFPRLKIVMEHITTKTLCELLKDY-ENLYATITL 211 (359)
T ss_dssp CHHHHHHHHHHHHHTTCCEEECC-CCSSCGGGTTGGGHHHHHHHHHHCTTSCEEECSCCSHHHHHHHHHC-TTEEEEECS
T ss_pred CHHHHHHHHHHHHHcCCEEEEec-CCchHhHHHHHHHHHHHHHHHHHcCCCcEEEEecCcHHHHHHHHhc-CCceEEEec
Confidence 77889999999999999999996 54321 11 111223 431 1245555554 100123467
Q ss_pred EeccCCcchhc
Q 022028 281 HTVWVNHTEVN 291 (304)
Q Consensus 281 H~~~l~~~di~ 291 (304)
|...|+++++.
T Consensus 212 hhL~lt~~~~~ 222 (359)
T 3pnu_A 212 HHLIITLDDVI 222 (359)
T ss_dssp GGGTCCHHHHH
T ss_pred hhhEEcHHHhc
Confidence 77888888764
|
| >2y1h_A Putative deoxyribonuclease tatdn3; hydrolase; 2.50A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.74 E-value=0.00048 Score=58.08 Aligned_cols=137 Identities=7% Similarity=0.016 Sum_probs=69.6
Q ss_pred HHHHHhcCcceeecCCCC--CHHHHHHHHHHcCCeEEeecccccCCCCCCCCc-ccC-----ChHHHHHHHHHHHHHHcC
Q 022028 131 GIELIHSGVTCFAEAGGQ--HVSEMAKAVELLGLRACLVQSTMDCGEGLPASW-AVR-----TTDDCIQSQKELYAKHHH 202 (304)
Q Consensus 131 ~~~~l~~GvTtv~d~~~~--~~~~~~~~~~~~gir~~~~~~~~d~g~~~~~~~-~~~-----~~~~~~~~~~~~~~~~~~ 202 (304)
+.++-.+||++++..+.. ..+.+.+.++..+.+.+.+..+ -|.+ ... ...+.++..++.+++...
T Consensus 26 l~~~~~~Gv~~~v~~~~~~~~~~~~~~l~~~~~~~i~~~~Gi-------hP~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 98 (272)
T 2y1h_A 26 LEKAKKANVVALVAVAEHSGEFEKIMQLSERYNGFVLPCLGV-------HPVQGLPPEDQRSVTLKDLDVALPIIENYKD 98 (272)
T ss_dssp HHHHHHTTEEEEEECCSSGGGHHHHHHHHHHTTTTEEEEECC-------CSBC-------CBCCHHHHHHHHHHHHHHGG
T ss_pred HHHHHHCCCCEEEEeCCCHHHHHHHHHHHHHCCCCEEEEEEE-------CCCccccccccccCCHHHHHHHHHHHHhCCC
Confidence 345678999998877532 2345566666666444332211 1111 110 112334455555544321
Q ss_pred CCCCCeEEEEeeCccc-------CCCHHHHHHHHHHHHHhCCeeeEEecCChhhHHHHHHhcCCCCCHHHHHHHhCCCCC
Q 022028 203 AADGRIRIWFGIRQIM-------NATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQN 275 (304)
Q Consensus 203 ~~~~~i~~~~~~~~~~-------~~~~e~l~~~~~~a~~~~~~~~~H~~E~~~~~~~~~~~~g~~~~~~~~l~~~g~l~~ 275 (304)
...+.--+++..+..+ ....+.++...++|+++++++.+|......+ .++.+.+.+. .
T Consensus 99 ~~~~iGE~Gld~~~~~~~~~~~~~~q~~~f~~~~~la~~~~lPv~iH~~~a~~~-------------~~~il~~~~~--~ 163 (272)
T 2y1h_A 99 RLLAIGEVGLDFSPRFAGTGEQKEEQRQVLIRQIQLAKRLNLPVNVHSRSAGRP-------------TINLLQEQGA--E 163 (272)
T ss_dssp GCSEEEEEECCCCTTTCCSHHHHHHHHHHHHHHHHHHHHHTCCEEEECTTCHHH-------------HHHHHHHTTC--C
T ss_pred CEEEEEeccCCCccccCCCCCCHHHHHHHHHHHHHHHHHhCCcEEEEeCCcHHH-------------HHHHHHhCCC--C
Confidence 1111001223221011 1123468889999999999999998754332 3455666552 2
Q ss_pred CeeEEEeccCCcchh
Q 022028 276 NLLSAHTVWVNHTEV 290 (304)
Q Consensus 276 ~~~~~H~~~l~~~di 290 (304)
+.++ ||..-+.+..
T Consensus 164 ~~v~-H~~~g~~~~~ 177 (272)
T 2y1h_A 164 KVLL-HAFDGRPSVA 177 (272)
T ss_dssp SEEE-ETCCSCHHHH
T ss_pred CEEE-EccCCCHHHH
Confidence 4444 9876554333
|
| >3ovg_A Amidohydrolase; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, NYSGXRC, HAD, PSI; HET: KCX; 2.06A {Mycoplasma synoviae} PDB: 3msr_A* | Back alignment and structure |
|---|
Probab=97.70 E-value=0.00048 Score=60.59 Aligned_cols=144 Identities=13% Similarity=0.018 Sum_probs=86.7
Q ss_pred HHHHHHHhcCcceeecCCC----CCHHHHHHHHHHc---CCeEEeecccccCCCCC--CCCccc-CChHHHHHHHHHHHH
Q 022028 129 LCGIELIHSGVTCFAEAGG----QHVSEMAKAVELL---GLRACLVQSTMDCGEGL--PASWAV-RTTDDCIQSQKELYA 198 (304)
Q Consensus 129 ~~~~~~l~~GvTtv~d~~~----~~~~~~~~~~~~~---gir~~~~~~~~d~g~~~--~~~~~~-~~~~~~~~~~~~~~~ 198 (304)
.-+..+.+.|++|+++... .....+.+.+++. |++.+.+-.+.... .+ .+.|.. ...++..+...+.+.
T Consensus 53 ~el~~~~~~G~~tiVd~t~~~~GRd~~~l~~is~~t~~~Gv~Iv~~TG~y~~~-~~~~~~~~~~~~~~e~l~~~~~~ei~ 131 (363)
T 3ovg_A 53 KEFKEFIDRGGSTIVTMDPPNVGRDVLKTLEIANAVKNLGGNVIMSTGFHKAK-FYDKYSSWLAVVPTEEIVKMCVAEIE 131 (363)
T ss_dssp HHHHHHHHTTEEEEEECCCTTTTCCHHHHHHHHHHHGGGTCEEEEEEECCCGG-GSCTTTSHHHHSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCeEEEeCCCccCCCHHHHHHHHHhcccCCcEEEEeCCCCcCc-ccccCcHhhhcCCHHHHHHHHHHHHH
Confidence 3445566889999998653 3456667777776 99987664443211 11 123321 233444444444444
Q ss_pred HHcC-------------CCCCCeEEEEeeCcccCCCHHHHHHHHHHHHHhCCeeeEEecCChhhHHHHHHhcCCCCCHHH
Q 022028 199 KHHH-------------AADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVT 265 (304)
Q Consensus 199 ~~~~-------------~~~~~i~~~~~~~~~~~~~~e~l~~~~~~a~~~~~~~~~H~~E~~~~~~~~~~~~g~~~~~~~ 265 (304)
...+ ...|.|+++++...+...-.+.+++..++|++.|+++.+|........+ .++
T Consensus 132 ~Gi~~~~~~gp~~~~t~ikaG~ikig~s~~~~t~~Q~~~f~aq~~~A~e~glPViiH~r~gr~a~d-----------~l~ 200 (363)
T 3ovg_A 132 EGMDEYNYNGPVVKRSKAKAGIIKAGTGYGAIDRLELKALEVAARTSILTGCPILVHTQLGTMALE-----------VAK 200 (363)
T ss_dssp TCCBTTTTSSSCCCBCSCCCCEEEEEEEETBEEHHHHHHHHHHHHHHHHHCCCEEEEEETTCSHHH-----------HHH
T ss_pred hcccccccccccccCCCccCCEEEEEeCCCCCCHHHHHHHHHHHHHHHHhCCEEEEeCCCCCCHHH-----------HHH
Confidence 4222 2346778777765443334446888899999999999999865322212 456
Q ss_pred HHHHhCCCCCCeeEEEecc
Q 022028 266 FLDKIEFLQNNLLSAHTVW 284 (304)
Q Consensus 266 ~l~~~g~l~~~~~~~H~~~ 284 (304)
.|++.|+--.+++..||..
T Consensus 201 iL~e~g~~~~~vvi~H~~~ 219 (363)
T 3ovg_A 201 HLIGFGANPDKIQISHLNK 219 (363)
T ss_dssp HHHHHTCCGGGEEEECGGG
T ss_pred HHHhcCCCCCcEEEEcCCC
Confidence 6777776434677788884
|
| >3gtx_A Organophosphorus hydrolase; mutant, amidohydrolase, alpha-beta barrel; HET: KCX; 1.62A {Deinococcus radiodurans} PDB: 2zc1_A* 3gti_A* 3gu9_A* 3gtf_A* 3gth_A* 3gu2_A* 3gu1_A* 3fdk_A* 3htw_A* | Back alignment and structure |
|---|
Probab=97.68 E-value=0.00046 Score=60.25 Aligned_cols=182 Identities=16% Similarity=0.119 Sum_probs=96.3
Q ss_pred cccccCccchhhhhhcccCCCCccccccccccCccCCCChHHHHHHHHHHHHHHHhcCcceeecCCC----CCHHHHHHH
Q 022028 81 GFVNTHVHTSQQLAKGIADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGG----QHVSEMAKA 156 (304)
Q Consensus 81 G~ID~H~Hl~~s~~~g~~~~~~~~~~l~~~~~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~d~~~----~~~~~~~~~ 156 (304)
|+..+|=|+.... .+...+.++. .|..++.+..+..-+..+.++|++++++... .....+.+.
T Consensus 32 G~t~~HEHl~~~~-~~~~~~~~~~------------~~~~~~~~~~~~~el~~a~~aGv~tiV~~~~~~~~r~~~~l~~l 98 (339)
T 3gtx_A 32 GATLPHEHVIFGY-PGYAGDVTLG------------PFDHAAALASCTETARALLARGIQTVVDATPNGCGRNPAFLREV 98 (339)
T ss_dssp CEEEEEEEEEECC-TTGGGGTTTS------------CCCHHHHHHHHHHHHHHHHHTTEEEEEECCCTTTTCCHHHHHHH
T ss_pred CCeeeccCeeccC-cccccCCCcc------------ccchHHHHHHHHHHHHHHHHhCCCeEEecCCCccCcCHHHHHHH
Confidence 8889999996421 1111111111 1234455666777788899999999998652 456777888
Q ss_pred HHHcCCeEEeecccccCC--CCCCCCcccCChHHHHHHHHHHHHH-H-cCCC-----CCCeEEEEeeCcccCCCHHHHHH
Q 022028 157 VELLGLRACLVQSTMDCG--EGLPASWAVRTTDDCIQSQKELYAK-H-HHAA-----DGRIRIWFGIRQIMNATDRLLLE 227 (304)
Q Consensus 157 ~~~~gir~~~~~~~~d~g--~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~-----~~~i~~~~~~~~~~~~~~e~l~~ 227 (304)
+++.|+..+.+..+.-.. ..+.+.+... ....+++..+++.. . ...+ .+.|.+++..+.+...-.+.+++
T Consensus 99 a~~~g~~i~~~tG~hp~~~~~~~~~~~~~~-~~~~~~~L~~~~~~e~~~gIg~tg~k~g~IEigld~~~~~~~q~~~f~a 177 (339)
T 3gtx_A 99 SEATGLQILCATGFYYEGGGATTYFKFRAS-LGDAESEIYEMMRTEVTEGIAGTGIRAGVIKLASSRDAITPYEQLFFRA 177 (339)
T ss_dssp HHHHCCEEECEECCCCTTTSSCHHHHHHHH-HSCHHHHHHHHHHHHHHTCSTTSSCCCSEEEEECCSSCCCHHHHHHHHH
T ss_pred HHHcCCcEEEEcCCCccCccCCcCCccccc-ccCCHHHHHHHHHHHHHhcccccCcccceEEEEcCCCCCCHHHHHHHHH
Confidence 888888775443221100 0000010000 00012222222221 1 1111 23345555544222222335777
Q ss_pred HHHHHHHhCCeeeEEecCChhhHHHHHHhcCCCCCHHHHHHHhCCCCCCeeEEEec-cCCc
Q 022028 228 TRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTV-WVNH 287 (304)
Q Consensus 228 ~~~~a~~~~~~~~~H~~E~~~~~~~~~~~~g~~~~~~~~l~~~g~l~~~~~~~H~~-~l~~ 287 (304)
-.++|++.|+++.+|........+ .++.|++.|+-..++++.||. +-+.
T Consensus 178 q~~lA~~~glPViiH~~~gr~a~~-----------~~~iL~~~~~~~~~~vi~H~~~~~~~ 227 (339)
T 3gtx_A 178 AARVQRETGVPIITHTQEGQQGPQ-----------QAELLTSLGADPARIMIGHMDGNTDP 227 (339)
T ss_dssp HHHHHHHHCCCEEEECSTTCCHHH-----------HHHHHHHTTCCGGGEEECCGGGCCCH
T ss_pred HHHHHHHHCCeEEEeCCCCcCHHH-----------HHHHHHHcCCCcccEEEEccCCCCCH
Confidence 889999999999999844322222 356666766643466678997 4443
|
| >3k2g_A Resiniferatoxin-binding, phosphotriesterase- related protein; TIM barrel, binuclear zinc, protein structure initiative II (PSI II); 1.80A {Rhodobacter sphaeroides 2} | Back alignment and structure |
|---|
Probab=97.60 E-value=0.0016 Score=57.40 Aligned_cols=140 Identities=10% Similarity=0.024 Sum_probs=77.8
Q ss_pred HHHHHHHHHHhcCcceeecCC----CCCHHHHHHHHHHcCCeEEeecccccCCCCCCCCccc-CChHHHHHHHHHHHHHH
Q 022028 126 STLLCGIELIHSGVTCFAEAG----GQHVSEMAKAVELLGLRACLVQSTMDCGEGLPASWAV-RTTDDCIQSQKELYAKH 200 (304)
Q Consensus 126 ~~~~~~~~~l~~GvTtv~d~~----~~~~~~~~~~~~~~gir~~~~~~~~d~g~~~~~~~~~-~~~~~~~~~~~~~~~~~ 200 (304)
.+..-+.++.++|++++++.. +.....+.+.++..|++.+.+-.+.... +.|.+.. ...++..+...+.+...
T Consensus 87 ~~~~~l~~~~~aGv~tiV~~t~~g~gr~~~~l~~la~~~gv~i~~~tG~y~~~--~~P~~~~~~~~~~L~~~~~~ei~~G 164 (364)
T 3k2g_A 87 LAIAEVKQFAAVGGRSIVDPTCRGIGRDPVKLRRISAETGVQVVMGAGYYLAS--SMPETAARLSADDIADEIVAEALEG 164 (364)
T ss_dssp HHHHHHHHHHHTTCCEEEECCCBTTTCCHHHHHHHHHHHCCEEEECCSBCCGG--GCCGGGGTCCHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHhcCCCeEEEeCCCcccCCHHHHHHHHHHhCCcEEEEeCccCCC--CCchhhccCCHHHHHHHHHHHHHhc
Confidence 344566778899999999876 3466777888888998876543332111 1122221 12322222222222211
Q ss_pred c---CCCCCCeE-EEEeeCcccCCCHH---HHHHHHHHHHHhCCeeeEEec---CChhhHHHHHHhcCCCCCHHHHHHHh
Q 022028 201 H---HAADGRIR-IWFGIRQIMNATDR---LLLETRDMAREFKTGIHMHVA---EIPYENQVVMDTRKVDHGTVTFLDKI 270 (304)
Q Consensus 201 ~---~~~~~~i~-~~~~~~~~~~~~~e---~l~~~~~~a~~~~~~~~~H~~---E~~~~~~~~~~~~g~~~~~~~~l~~~ 270 (304)
. +...+.|+ +++.. ..++. .+++..++|++.|+++.+|.. +...+ .++.|++.
T Consensus 165 i~~~~vkag~IGEiGld~----~~t~~q~~~f~aq~~~A~~~glPV~iH~~gr~~a~~e-------------~l~iL~e~ 227 (364)
T 3k2g_A 165 TDGTDARIGLIGEIGVSS----DFTAEEEKSLRGAARAQVRTGLPLMVHLPGWFRLAHR-------------VLDLVEEE 227 (364)
T ss_dssp BTTBSCCCSSEEEEECCT----TCCHHHHHHHHHHHHHHHHHCCCEEEECCTTSCCHHH-------------HHHHHHHT
T ss_pred cccCCcceeEEEEEEcCC----CCCHHHHHHHHHHHHHHHHHCCeEEEecCCCCccHHH-------------HHHHHHHc
Confidence 1 11223342 33332 22333 578888999999999999972 22222 45666666
Q ss_pred CCCCCCeeEEEecc
Q 022028 271 EFLQNNLLSAHTVW 284 (304)
Q Consensus 271 g~l~~~~~~~H~~~ 284 (304)
|+--.++++.||..
T Consensus 228 g~~~~~vvi~H~~~ 241 (364)
T 3k2g_A 228 GADLRHTVLCHMNP 241 (364)
T ss_dssp TCCGGGEEECCCGG
T ss_pred CCCCCceEEECCCC
Confidence 66334566678883
|
| >3pnz_A Phosphotriesterase family protein; amidohydrolase fold; HET: KCX; 1.60A {Listeria monocytogenes serotype 4b strorganism_taxid} SCOP: c.1.9.0 | Back alignment and structure |
|---|
Probab=97.58 E-value=0.00028 Score=61.35 Aligned_cols=146 Identities=14% Similarity=0.131 Sum_probs=80.7
Q ss_pred HHHHHHHHHhcCcceeecCCC----CCHHHHHHHHHHcCCeEEeecccccCC---CCCC-------------CCccc-CC
Q 022028 127 TLLCGIELIHSGVTCFAEAGG----QHVSEMAKAVELLGLRACLVQSTMDCG---EGLP-------------ASWAV-RT 185 (304)
Q Consensus 127 ~~~~~~~~l~~GvTtv~d~~~----~~~~~~~~~~~~~gir~~~~~~~~d~g---~~~~-------------~~~~~-~~ 185 (304)
+..-+.++...|++|++|... .....+.+..++.|++.+.+-.+.... .++. +.|.. ..
T Consensus 48 ~~~el~~~~~~G~~tiVd~t~~~~gR~~~~l~~is~~tgv~iv~~TG~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 127 (330)
T 3pnz_A 48 SQLDVQDFADLGGKTIVDATAVDYGRRVLDVAQISKETGIQIVGTAGFNKSFLWDGKIKPELKPIIGDFETYYEWIENTT 127 (330)
T ss_dssp HHHHHHHHHHTTCCEEEECCCGGGCBCHHHHHHHHHHHCCEEEEEEECCCGGGGGSBCCGGGHHHHCSCSBHHHHHHTSC
T ss_pred HHHHHHHHHHhCCCEEEECCCCccccCHHHHHHHHHHhCCEEEEeCCCCccccccccccccccccccccccCchhhccCC
Confidence 344566678899999999754 456778888899999997664443211 0000 12211 12
Q ss_pred hHHHHHHHHHHHHHHcCC---CCCCeEEEEeeCcccCCCHHHHHHHHHHHHHhCCeeeEEecCChhhHHHHHHhcCCCCC
Q 022028 186 TDDCIQSQKELYAKHHHA---ADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHG 262 (304)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~---~~~~i~~~~~~~~~~~~~~e~l~~~~~~a~~~~~~~~~H~~E~~~~~~~~~~~~g~~~~ 262 (304)
.++..+...+.+...... ..|.|.+++..+.+...-.+.+++-.++|++.|+++.+|..+.....+
T Consensus 128 ~e~l~~~~~~ei~~Gi~~t~vkaGvIEiGld~~~~~~~q~~~f~aq~~~A~~~glPViiH~r~g~~a~~----------- 196 (330)
T 3pnz_A 128 TDKLTEFVVNEVENGLEGTPYKAGQVKFGTGYNMITPLEEKTIRAVARAHHETKAPIHSHTEAGTMALE----------- 196 (330)
T ss_dssp HHHHHHHHHHHHHTCSTTSSCCEEEEEEECBTTBCCHHHHHHHHHHHHHHHHHCCCEEEECGGGCCHHH-----------
T ss_pred HHHHHHHHHHHHHhhCCCcCcCcCeEEEEcCCCCCCHHHHHHHHHHHHHHHHHCCeEEEeCCCCcChHH-----------
Confidence 233323333333332221 123344444433222222346788899999999999999865322121
Q ss_pred HHHHHHHhCCCCCCeeEEEec
Q 022028 263 TVTFLDKIEFLQNNLLSAHTV 283 (304)
Q Consensus 263 ~~~~l~~~g~l~~~~~~~H~~ 283 (304)
.++.|++.|+-..++++.||.
T Consensus 197 ~l~iL~e~~~~~~~vvi~H~~ 217 (330)
T 3pnz_A 197 QIEILKQENIPLEYLSIGHMD 217 (330)
T ss_dssp HHHHHHHTTCCGGGEEETTGG
T ss_pred HHHHHHHcCCCCCeEEEecCC
Confidence 245566666533455666886
|
| >1zzm_A Putative deoxyribonuclease YJJV; hydrolaze, zinc, PEG, structural genomics, PSI; HET: P33; 1.80A {Escherichia coli} SCOP: c.1.9.12 | Back alignment and structure |
|---|
Probab=97.52 E-value=0.00078 Score=56.33 Aligned_cols=131 Identities=11% Similarity=0.092 Sum_probs=65.1
Q ss_pred HHHHHhcCcceeecCCCC--CHHHHHHHHHHcCCeEEeecccccCCCCCCCCcccCChHHHHHHHHHHHHHHcCCCCCCe
Q 022028 131 GIELIHSGVTCFAEAGGQ--HVSEMAKAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRI 208 (304)
Q Consensus 131 ~~~~l~~GvTtv~d~~~~--~~~~~~~~~~~~gir~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 208 (304)
+.++.++||++++..+.. ....+.+.+++.+ ..+.+. | +-|.+.....+..+++.+++++... ...+
T Consensus 25 l~~~~~~Gv~~~v~~~~~~~~~~~~~~l~~~~~-~~~~~~-----G--~hP~~~~~~~~~~~~~l~~~~~~~~---~~~~ 93 (259)
T 1zzm_A 25 LQRAAQAGVGKIIVPATEAENFARVLALAENYQ-PLYAAL-----G--LHPGMLEKHSDVSLEQLQQALERRP---AKVV 93 (259)
T ss_dssp HHHHHHTTEEEEEEECCSGGGHHHHHHHHHHCT-TEEEEE-----C--CCGGGGGGCCHHHHHHHHHHHHHCC---SSEE
T ss_pred HHHHHHcCCCEEEEecCCHHHHHHHHHHHHhCC-CeEEEE-----E--ecccccccCCHHHHHHHHHHHhcCC---CCEE
Confidence 345778999998766432 2344455555544 222221 1 1121111112234445555554311 1111
Q ss_pred E---EEEeeCcc---cCCCHHHHHHHHHHHHHhCCeeeEEecCChhhHHHHHHhcCCCCCHHHHHHHhCCCCCCeeEEEe
Q 022028 209 R---IWFGIRQI---MNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHT 282 (304)
Q Consensus 209 ~---~~~~~~~~---~~~~~e~l~~~~~~a~~~~~~~~~H~~E~~~~~~~~~~~~g~~~~~~~~l~~~g~l~~~~~~~H~ 282 (304)
. +++..+.. .....+.++...++|+++++++.+|......+ .++.+++.+. ..+ .+.||
T Consensus 94 ~iGEiGld~~~~~~~~~~q~~~f~~~~~~a~~~~~Pv~iH~~~a~~~-------------~~~il~~~~~-~~~-~i~H~ 158 (259)
T 1zzm_A 94 AVGEIGLDLFGDDPQFERQQWLLDEQLKLAKRYDLPVILHSRRTHDK-------------LAMHLKRHDL-PRT-GVVHG 158 (259)
T ss_dssp EEEEEEEECCSSCCCHHHHHHHHHHHHHHHHHTTCCEEEEEESCHHH-------------HHHHHHHHCC-TTC-EEETT
T ss_pred EEEEeccCCCCCCCCHHHHHHHHHHHHHHHHHhCCcEEEEecccHHH-------------HHHHHHhcCC-CCC-EEEEc
Confidence 1 22332111 11123468888999999999999999765432 3455555553 123 34487
Q ss_pred ccCCc
Q 022028 283 VWVNH 287 (304)
Q Consensus 283 ~~l~~ 287 (304)
..-+.
T Consensus 159 ~~g~~ 163 (259)
T 1zzm_A 159 FSGSL 163 (259)
T ss_dssp CCSCH
T ss_pred CCCCH
Confidence 65543
|
| >1xwy_A DNAse TATD, deoxyribonuclease TATD; TIM barrael, zinc ION, structural genomics, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.1.9.12 | Back alignment and structure |
|---|
Probab=97.30 E-value=0.0002 Score=60.14 Aligned_cols=53 Identities=15% Similarity=0.130 Sum_probs=33.8
Q ss_pred HHHHHHHHHHHHhCCeeeEEecCChhhHHHHHHhcCCCCCHHHHHHHhCCCCCCeeEEEeccCCcch
Q 022028 223 RLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTE 289 (304)
Q Consensus 223 e~l~~~~~~a~~~~~~~~~H~~E~~~~~~~~~~~~g~~~~~~~~l~~~g~l~~~~~~~H~~~l~~~d 289 (304)
+.++...++|+++++++.+|..+...+ .++.+++.+.-..+. +.||..-+.+.
T Consensus 112 ~~f~~~l~~a~~~~lpv~iH~~~a~~~-------------~~~il~~~~~~~~~~-v~H~~~g~~~~ 164 (264)
T 1xwy_A 112 RAFVAQLRIAADLNMPVFMHCRDAHER-------------FMTLLEPWLDKLPGA-VLHCFTGTREE 164 (264)
T ss_dssp HHHHHHHHHHHHHTCCEEEEEESCHHH-------------HHHHHGGGGGGSSCE-EECSCCCCHHH
T ss_pred HHHHHHHHHHHHhCCcEEEEcCCchHH-------------HHHHHHhcCCCCCcE-EEEccCCCHHH
Confidence 458889999999999999998755332 345555554312243 44876544433
|
| >3rcm_A TATD family hydrolase; HET: CIT; 2.05A {Pseudomonas putida} | Back alignment and structure |
|---|
Probab=97.27 E-value=0.0013 Score=56.08 Aligned_cols=56 Identities=9% Similarity=0.104 Sum_probs=36.2
Q ss_pred HHHHHHHHHHHHHhCCeeeEEecCChhhHHHHHHhcCCCCCHHHHHHHhCCCCCCeeEEEeccCCcchhc
Q 022028 222 DRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEVN 291 (304)
Q Consensus 222 ~e~l~~~~~~a~~~~~~~~~H~~E~~~~~~~~~~~~g~~~~~~~~l~~~g~l~~~~~~~H~~~l~~~di~ 291 (304)
.+.+++.+++|+++++++.+|.-+...+ .++.+++.+.-..+ .+.||..-+.++..
T Consensus 113 ~~~F~~ql~lA~e~~lPv~iH~r~a~~~-------------~l~il~~~~~~~~~-~V~H~fsG~~e~a~ 168 (287)
T 3rcm_A 113 EKALEAQLTLAAQLRLPVFLHERDASER-------------LLAILKDYRDHLTG-AVVHCFTGEREALF 168 (287)
T ss_dssp HHHHHHHHHHHHHHTCCEEEEEESCHHH-------------HHHHHHTTGGGCSC-EEECSCCCCHHHHH
T ss_pred HHHHHHHHHHHHHhCCCEEEEcCCcHHH-------------HHHHHHHcCCCCCe-EEEEeCCCCHHHHH
Confidence 5578889999999999999999876543 34444444331123 34587665554443
|
| >4gxw_A Adenosine deaminase; amidohydrolase, COG1816, EFI, structural genomics, hydrolase; 1.30A {Burkholderia ambifaria} | Back alignment and structure |
|---|
Probab=97.26 E-value=0.0062 Score=53.85 Aligned_cols=155 Identities=14% Similarity=0.066 Sum_probs=89.2
Q ss_pred CChHHHHHHHHHHHHHHHhcCcceeec---------CCCCCHH--------HHHHHHHHcCCeEEeecccccCCCCCCCC
Q 022028 118 MTEEDSYISTLLCGIELIHSGVTCFAE---------AGGQHVS--------EMAKAVELLGLRACLVQSTMDCGEGLPAS 180 (304)
Q Consensus 118 ~~~e~~~~~~~~~~~~~l~~GvTtv~d---------~~~~~~~--------~~~~~~~~~gir~~~~~~~~d~g~~~~~~ 180 (304)
.++++++..+...+.++.+.||..+-- ..+...+ .+.++.++.|+..-+-..++-.
T Consensus 89 ~t~ed~~r~a~e~~ed~a~dgV~Y~Eirf~P~~~~~~~Gl~~~~vv~av~~g~~~a~~~~gi~~rlI~~~~R~------- 161 (380)
T 4gxw_A 89 TRPDDLRRIAYEYLEDAAAHNVRHAEFFWNPTGTVRVSGIPYADAQAAIVTGMRDAARDFGIGARLIPSIDRE------- 161 (380)
T ss_dssp CSHHHHHHHHHHHHHHHHTTTEEEEEEEECHHHHHHTTCCCHHHHHHHHHHHHHHHHHHHCCEEEEEEEEETT-------
T ss_pred CCHHHHHHHHHHHHHHHHHCCCeEEEEEcCHHHhccccCCCHHHHHHHHHHHHHHHHHhcCCcEEEEEeecCC-------
Confidence 467888888888899999999998621 1111111 2334445667765433222211
Q ss_pred cccCChHHHHHHHHHHHHHHcCCCCCCeEEEEeeCcccCCCHHHHHHHHHHHHHhCCeeeEEecCChhhHHHHHHhcCCC
Q 022028 181 WAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVD 260 (304)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~e~l~~~~~~a~~~~~~~~~H~~E~~~~~~~~~~~~g~~ 260 (304)
..++... +..++...+.. ++.+.+.++- .....+++.+..+++.|++.|+++.+|+.|.....+.+.+
T Consensus 162 ---~~~e~a~-~~~~~a~~~~~--~~VvG~dL~g-~E~~~p~~~f~~~f~~ar~~Gl~~t~HAGE~~~p~~~i~~----- 229 (380)
T 4gxw_A 162 ---QDPDEAV-AIVDWMKANRA--DEVAGIGIDY-RENDRPPELFWKAYRDARAAGFRTTAHAGEFGMPWRNVET----- 229 (380)
T ss_dssp ---SCHHHHH-HHHHHHHHTCC--TTBCEEEEES-CCTTCCGGGGHHHHHHHHHTTCEEEEEESCTTCCHHHHHH-----
T ss_pred ---CCHHHHH-HHHHHHHHhCC--CCEEEEeecC-CCCCCCHHHHHHHHHHHHHcCCCeeeeccccCCchHHHHH-----
Confidence 1223332 23334444332 3444444442 1234456678889999999999999999997532222211
Q ss_pred CCHHHHHHHhCCCCCCeeEEEeccCCcchh--c-----------ccccccccc
Q 022028 261 HGTVTFLDKIEFLQNNLLSAHTVWVNHTEV--N-----------CTFGNFKYA 300 (304)
Q Consensus 261 ~~~~~~l~~~g~l~~~~~~~H~~~l~~~di--~-----------~p~sN~~l~ 300 (304)
-++ +|+.+ =+.|++.+.+++- + ||.||..++
T Consensus 230 -----al~---~lga~-RIgHG~~~~~d~~L~~~l~~~~I~lEvCP~SN~~l~ 273 (380)
T 4gxw_A 230 -----AVD---LLHVD-RVDHGYTIVDNPELCARYAERGIVFTVVPTNSYYLR 273 (380)
T ss_dssp -----HHH---TSCCS-EEEECGGGGGCHHHHHHHHHHTCEEEECTTCHHHHH
T ss_pred -----HHH---HcCCc-ccccceeeccChHHHHHHHHhCceeEECCcchhhhc
Confidence 122 23322 3889999965432 1 999998775
|
| >3ipw_A Hydrolase TATD family protein; niaid, ssgcid, seattle structural genomics center for infect disease, dysentery, liver abcess; 1.95A {Entamoeba histolytica hm-1} | Back alignment and structure |
|---|
Probab=97.06 E-value=0.0013 Score=56.84 Aligned_cols=55 Identities=7% Similarity=-0.058 Sum_probs=38.3
Q ss_pred HHHHHHHHHHHH-hCCeeeEEecCChhhHHHHHHhcCCCCCHHHHHHHhCCCCCCeeEEEeccCCcchhc
Q 022028 223 RLLLETRDMARE-FKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEVN 291 (304)
Q Consensus 223 e~l~~~~~~a~~-~~~~~~~H~~E~~~~~~~~~~~~g~~~~~~~~l~~~g~l~~~~~~~H~~~l~~~di~ 291 (304)
+.+++-+++|++ +++++.+|.-+...+ .++.|++.+.-..+ .+.||..-+.++..
T Consensus 154 ~~F~~ql~lA~e~~~lPviiH~r~A~~d-------------~l~iL~~~~~~~~~-gViH~FsGs~e~a~ 209 (325)
T 3ipw_A 154 SGYRTLSILHQKYPYLPFFFHCRKSWSD-------------LCQLNKELGYNGCK-GVVHCFDGTEEEMN 209 (325)
T ss_dssp HHHHHTHHHHHHCTTCCEEEEEESCHHH-------------HHHHHHHTTCTTSC-EEECSCCCCHHHHH
T ss_pred HHHHHHHHHHHHhhCCeEEEEeCchHHH-------------HHHHHHhcCCCCCc-EEEEECCCCHHHHH
Confidence 467788999999 999999999776543 45556555432223 45598877766655
|
| >4i6k_A Amidohydrolase family protein; enzyme function initiative, isomerase, structural; HET: CIT; 2.28A {Acinetobacter baumannii} | Back alignment and structure |
|---|
Probab=96.87 E-value=0.012 Score=50.01 Aligned_cols=156 Identities=10% Similarity=0.009 Sum_probs=80.3
Q ss_pred eeccccccCccchhhhhhcccCCCCccccccccccCccCCCChHHHHHHHHHHHHHHHhcCcceeecCCC----CCHHHH
Q 022028 78 LLPGFVNTHVHTSQQLAKGIADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGG----QHVSEM 153 (304)
Q Consensus 78 v~PG~ID~H~Hl~~s~~~g~~~~~~~~~~l~~~~~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~d~~~----~~~~~~ 153 (304)
+=|++||+|+|++... +.|.....+......+.+++. ..+-..||...+-... ...+.+
T Consensus 23 ~p~~~iDtH~Hl~~~~----------~p~~~~~~~~p~~~~~~e~~l-------~~~~~~GV~~~V~v~~~~~~~~n~~~ 85 (294)
T 4i6k_A 23 MKMNCIDTHAHVFSTQ----------DHSIETARYAPDYEATVQSFI-------SHLDEHNFTHGVLVQPSFLGTNNQAM 85 (294)
T ss_dssp --CCSEEEEECCBCTT----------SCCCTTCSCCCCSCBCHHHHH-------HHHHHTTCCEEEEECCGGGTTCCHHH
T ss_pred CCCCceEeeeEeecCC----------CCCCCCCCCCCCCCCCHHHHH-------HHHHHcCCCeEEEecCcccccchHHH
Confidence 4457899999997521 223332222111123444433 3355678887754432 222445
Q ss_pred HHHHHHcCCeEEeecccccCCCCCCCCcccCChHHHHHHHHHHHHHHcCCCCCCeEEEEeeCcc--cCCCHHHHHHHHHH
Q 022028 154 AKAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQI--MNATDRLLLETRDM 231 (304)
Q Consensus 154 ~~~~~~~gir~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--~~~~~e~l~~~~~~ 231 (304)
.+.+++..-|.+... . +.+.. .. +.++++... +...+.+.+... .....+.++...++
T Consensus 86 ~~~~~~~p~r~~g~~-~------v~P~~----~~-------~eL~~l~~~--gv~Gi~l~~~~~~~~~~~~~~~~~~~~~ 145 (294)
T 4i6k_A 86 LNAIQQYPDRLKGIA-V------VQHTT----TF-------NELVNLKAQ--GIVGVRLNLFGLNLPALNTPDWQKFLRN 145 (294)
T ss_dssp HHHHHHSTTTEEEEE-C------CCTTC----CH-------HHHHHHHTT--TEEEEEEECTTSCCCCSSSHHHHHHHHH
T ss_pred HHHHHHCCCeEEEEE-E------eCCcc----cH-------HHHHHHHHC--CCcEEEeccCCCCCCCcccHHHHHHHHH
Confidence 666666644442111 1 11211 11 223333332 444555554322 23456788999999
Q ss_pred HHHhCCeeeEEecCChhhHHHHHHhcCCCCCHHHHHHHhCCCCCCeeEEEeccC
Q 022028 232 AREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWV 285 (304)
Q Consensus 232 a~~~~~~~~~H~~E~~~~~~~~~~~~g~~~~~~~~l~~~g~l~~~~~~~H~~~l 285 (304)
|+++|+++.+|+.... ... ..+.+++.+ + ++++.|+...
T Consensus 146 a~~~glpv~iH~~~~~--l~~----------~~~~l~~~p-~--~~Vi~H~g~p 184 (294)
T 4i6k_A 146 VESLNWQVELHAPPKY--LVQ----------LLPQLNEYS-F--DVVIDHFGRV 184 (294)
T ss_dssp HHHTTCEEEEECCHHH--HHH----------HHHHHTTSS-S--CEEESGGGCC
T ss_pred HHHcCCEEEEeeCcch--HHH----------HHHHHHHCC-C--CEEEECCCCC
Confidence 9999999999986321 111 234444555 2 5667777664
|
| >3guw_A Uncharacterized protein AF_1765; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 3.20A {Archaeoglobus fulgidus dsm 4304} | Back alignment and structure |
|---|
Probab=96.82 E-value=0.034 Score=46.44 Aligned_cols=53 Identities=13% Similarity=0.219 Sum_probs=35.5
Q ss_pred HHHHHHHHHHHHHhCCeeeEEecCChhhHHHHHHhcCCCCCHHHHHHHhCCCCCCeeEEEe
Q 022028 222 DRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHT 282 (304)
Q Consensus 222 ~e~l~~~~~~a~~~~~~~~~H~~E~~~~~~~~~~~~g~~~~~~~~l~~~g~l~~~~~~~H~ 282 (304)
.+.+++..++|+++++++.+|.-... ..+...+ .++.+++.|.-..+.++.||
T Consensus 109 ~~~f~~ql~lA~e~~lPv~iH~r~~~-~~~a~~~-------~~~il~~~~~~~~~~vi~H~ 161 (261)
T 3guw_A 109 IEVLKSQLELAKRMDVPCIIHTPRGN-KLKATRK-------TLEILESLDFPADLAVIDHV 161 (261)
T ss_dssp HHHHHHHHHHHHHHTCCEEEECCSSS-TTHHHHH-------HHHHHHHTTCCTTSEEEESC
T ss_pred HHHHHHHHHHHHHhCCeEEEEcCCCc-ccchHHH-------HHHHHHHcCCCCCCEEEEeC
Confidence 34688899999999999999986431 0111111 56777777664345667899
|
| >3lgd_A Adenosine deaminase CECR1; TIM barrel, dimerization and receptor binding domains, glyco hydrolase, growth factor, secreted; HET: NAG; 2.00A {Homo sapiens} PDB: 3lgg_A* | Back alignment and structure |
|---|
Probab=96.82 E-value=0.0057 Score=56.02 Aligned_cols=71 Identities=11% Similarity=0.073 Sum_probs=45.7
Q ss_pred CCHHHHHHHHHH--HHHhCCeeeEEecCChhhHHHHHHhcCCCCCHHHHHHHhCCCCCCeeEEEeccCCc--chhc----
Q 022028 220 ATDRLLLETRDM--AREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNH--TEVN---- 291 (304)
Q Consensus 220 ~~~e~l~~~~~~--a~~~~~~~~~H~~E~~~~~~~~~~~~g~~~~~~~~l~~~g~l~~~~~~~H~~~l~~--~di~---- 291 (304)
.+++.+..+++. |++.|+++.+|+.|+... |.. +.+.+.+.-.|+.+ -+.||+++.+ +.++
T Consensus 306 ~p~~~f~~~f~~~~A~~~gl~~t~HAGE~~~~--------g~~--~~~~i~~Al~Lga~-RIgHGv~l~~dp~l~~~l~~ 374 (508)
T 3lgd_A 306 HSLHDYKEALMIPAKDGVKLPYFFHAGETDWQ--------GTS--IDRNILDALMLNTT-RIGHGFALSKHPAVRTYSWK 374 (508)
T ss_dssp CCTGGGHHHHTHHHHTTCCCCBCCEECCSSCC--------SST--TTTHHHHHHHTTCS-SEEECTTGGGCHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHcCCceeeecccccCC--------CCC--cHHHHHHHHhcCCc-eeeeeEecCccHHHHHHHHh
Confidence 356667778887 788999999999998531 100 11111111124443 3799999974 3333
Q ss_pred -------cccccccccc
Q 022028 292 -------CTFGNFKYAV 301 (304)
Q Consensus 292 -------~p~sN~~l~~ 301 (304)
||.||.+++.
T Consensus 375 ~~I~levCP~SN~~l~~ 391 (508)
T 3lgd_A 375 KDIPIEVCPISNQVLKL 391 (508)
T ss_dssp TTCCEEECHHHHHHTTS
T ss_pred cCCeEEECcchHHHhCC
Confidence 9999999974
|
| >3rhg_A Putative phophotriesterase; hydrolase, amidohydrolase, zinc binding site, enzyme functio initiative, EFI; HET: SO4; 1.53A {Proteus mirabilis} | Back alignment and structure |
|---|
Probab=96.74 E-value=0.0043 Score=54.62 Aligned_cols=141 Identities=12% Similarity=0.072 Sum_probs=74.9
Q ss_pred HHHHHHHHHhcCcceeecCC-----CCCHHHHHHHHHHcCCeEEeecccccCCCCCCCCcccCChHHHHHHHHHHHHHHc
Q 022028 127 TLLCGIELIHSGVTCFAEAG-----GQHVSEMAKAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYAKHH 201 (304)
Q Consensus 127 ~~~~~~~~l~~GvTtv~d~~-----~~~~~~~~~~~~~~gir~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (304)
+..-+.++..+|++|+++.. +.....+.+.+++.|+..+.+..+.... +.|.+.....++..+...+.+....
T Consensus 77 ~~~el~~~~~aGv~tiV~~~g~~g~~r~~~~l~~la~~~gi~i~~~tG~y~~~--~~P~~~~~~~~~L~~~~~~ei~~gi 154 (365)
T 3rhg_A 77 VIFELNNFKELGGKTIVDATGSSSIGRDIRKLKQVAELTGINVVASSGLYIEK--FEGKRLADDIDAMAKMIDDELNIGI 154 (365)
T ss_dssp HHHHHHHHHHTTEEEEEECCCSGGGTCCHHHHHHHHHHHCCEEECEECCCCHH--HHGGGGGSCHHHHHHHHHHHHHTCS
T ss_pred HHHHHHHHHhcCCCeEEEcCCCCCCCCCHHHHHHHHHHHCCcEEEEeCccCCC--CCchhhcCCHHHHHHHHHHHHHhcc
Confidence 33456778899999999887 2456777788888998876543322100 0022221122222222222222111
Q ss_pred C---CCCCCeEEEEeeCcccCCCHH---HHHHHHHHHHHh-CCeeeEEe-cCChhhHHHHHHhcCCCCCHHHHHHHh-CC
Q 022028 202 H---AADGRIRIWFGIRQIMNATDR---LLLETRDMAREF-KTGIHMHV-AEIPYENQVVMDTRKVDHGTVTFLDKI-EF 272 (304)
Q Consensus 202 ~---~~~~~i~~~~~~~~~~~~~~e---~l~~~~~~a~~~-~~~~~~H~-~E~~~~~~~~~~~~g~~~~~~~~l~~~-g~ 272 (304)
. ...+.|+ -++.. +..+++ .+++..++|++. |+++.+|. .......+ .++.|.+. |+
T Consensus 155 ~~t~vkag~IG-EiGld--~~~t~~q~~~f~aq~~~A~~~~glPV~iH~~r~~~a~~e-----------~l~iL~e~~~~ 220 (365)
T 3rhg_A 155 DGTDIRAGMIG-EIGVS--PFFTDGEKNSLRAAALAQNNNPYASMNIHMPGWQRRGDE-----------VLDILLTEMGC 220 (365)
T ss_dssp TTSSCCCCEEE-EEECC--TTCCHHHHHHHHHHHHHHTTCTTCEEEEECCTTSCCHHH-----------HHHHHTTTTCC
T ss_pred ccCCceeEEEE-EEEcC--CCCCHHHHHHHHHHHHHHHHhcCCcEEEECCCCCcCHHH-----------HHHHHHhccCC
Confidence 1 1112231 12222 123333 577788899999 99999997 42111111 45566655 65
Q ss_pred CCCCeeEEEec
Q 022028 273 LQNNLLSAHTV 283 (304)
Q Consensus 273 l~~~~~~~H~~ 283 (304)
--.++++.||.
T Consensus 221 ~~~~vvi~H~~ 231 (365)
T 3rhg_A 221 DPAKISLAHSD 231 (365)
T ss_dssp CGGGEEESCCG
T ss_pred CCCceEEecCC
Confidence 33456677888
|
| >1j6o_A TATD-related deoxyribonuclease; structural genomics, TM0667, JCSG, PSI, protein structure initiative, joint center for structural genomics; 1.80A {Thermotoga maritima} SCOP: c.1.9.12 | Back alignment and structure |
|---|
Probab=96.62 E-value=0.0004 Score=58.59 Aligned_cols=56 Identities=13% Similarity=0.176 Sum_probs=37.0
Q ss_pred CHHHHHHHHHHHHHhCCeeeEEecCChhhHHHHHHhcCCCCCHHHHHHHhCCCCCCeeEEEeccCCcchh
Q 022028 221 TDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEV 290 (304)
Q Consensus 221 ~~e~l~~~~~~a~~~~~~~~~H~~E~~~~~~~~~~~~g~~~~~~~~l~~~g~l~~~~~~~H~~~l~~~di 290 (304)
..+.++...++|+++|+++.+|..+...+ .++.+++.+.-..+.++ ||..-+.+.+
T Consensus 118 q~~~f~~~~~~a~~~~lPv~iH~~~~~~~-------------~~~il~~~p~~~~~~I~-H~~~g~~~~~ 173 (268)
T 1j6o_A 118 QKRVFVEQIELAGKLNLPLVVHIRDAYSE-------------AYEILRTESLPEKRGVI-HAFSSDYEWA 173 (268)
T ss_dssp HHHHHHHHHHHHHHHTCCEEEEEESCHHH-------------HHHHHHHSCCCSSCEEE-TTCCSCHHHH
T ss_pred HHHHHHHHHHHHHHhCCCEEEEeCchHHH-------------HHHHHHhcCCCCCCEEE-EcCCCCHHHH
Confidence 44568889999999999999998765433 34455555432234555 8766554443
|
| >1yix_A Deoxyribonuclease YCFH; TIM barrel, zinc ION, NEW YORK SGX center for structural genomics, nysgxrc; 1.90A {Escherichia coli} SCOP: c.1.9.12 | Back alignment and structure |
|---|
Probab=96.44 E-value=0.0026 Score=53.12 Aligned_cols=56 Identities=9% Similarity=0.179 Sum_probs=35.6
Q ss_pred HHHHHHHHHHHHHhCCeeeEEecCChhhHHHHHHhcCCCCCHHHHHHHhCCCCCCeeEEEeccCCcchhc
Q 022028 222 DRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEVN 291 (304)
Q Consensus 222 ~e~l~~~~~~a~~~~~~~~~H~~E~~~~~~~~~~~~g~~~~~~~~l~~~g~l~~~~~~~H~~~l~~~di~ 291 (304)
.+.++...++|+++|+++.+|..+...+. ++.+++.+.-..+++ .||...+.+++.
T Consensus 110 ~~~~~~~~~~a~~~~~pv~iH~~~~~~~~-------------~~~l~~~~~p~~~~v-~H~~~~~~~~~~ 165 (265)
T 1yix_A 110 QESFIHHIQIGRELNKPVIVHTRDARADT-------------LAILREEKVTDCGGV-LHCFTEDRETAG 165 (265)
T ss_dssp HHHHHHHHHHHHHHTCCEEEEEESCHHHH-------------HHHHHHTTGGGTCEE-ETTCCSCHHHHH
T ss_pred HHHHHHHHHHHHHhCCCEEEEecCchHHH-------------HHHHHhcCCCCCCEE-EEcCCCCHHHHH
Confidence 45688899999999999999998665433 334444333222433 377666555443
|
| >2xio_A Putative deoxyribonuclease tatdn1; hydrolase; 1.19A {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.42 E-value=0.0016 Score=55.87 Aligned_cols=54 Identities=7% Similarity=0.004 Sum_probs=35.3
Q ss_pred HHHHHHHHHHHHhCCeeeEEecCChhhHHHHHHhcCCCCCHHHHHHHhCCCCCCeeEEEeccCCcchh
Q 022028 223 RLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEV 290 (304)
Q Consensus 223 e~l~~~~~~a~~~~~~~~~H~~E~~~~~~~~~~~~g~~~~~~~~l~~~g~l~~~~~~~H~~~l~~~di 290 (304)
+.++...++|+++++++.+|..+...+ .++.+++.+. .....+.||..-+.+..
T Consensus 127 ~~f~~ql~lA~~~~lPv~iH~r~a~~~-------------~~~il~~~~~-~~~~~i~H~f~g~~~~~ 180 (301)
T 2xio_A 127 KYFEKQFELSEQTKLPMFLHCRNSHAE-------------FLDITKRNRD-RCVGGVVHSFDGTKEAA 180 (301)
T ss_dssp HHHHHTHHHHHHHCCCEEEEEESCHHH-------------HHHHHHHTGG-GSSCEEETTCCCCHHHH
T ss_pred HHHHHHHHHHHHhCCcEEEEecCchHH-------------HHHHHHhccC-CCCcEEEEccCCCHHHH
Confidence 567888999999999999998654433 3455554432 11235688865554443
|
| >2ffi_A 2-pyrone-4,6-dicarboxylic acid hydrolase, putativ; TIM-barrel protein., structural genomics, PSI, protein struc initiative; 2.61A {Pseudomonas putida} SCOP: c.1.9.15 | Back alignment and structure |
|---|
Probab=96.39 E-value=0.019 Score=48.48 Aligned_cols=52 Identities=13% Similarity=0.008 Sum_probs=36.2
Q ss_pred CCCHHHHHHHHHHHHHhCCeeeEEecCCh-hhHHHHHHhcCCCCCHHHHHHHhCCCCCCeeEEEeccCC
Q 022028 219 NATDRLLLETRDMAREFKTGIHMHVAEIP-YENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVN 286 (304)
Q Consensus 219 ~~~~e~l~~~~~~a~~~~~~~~~H~~E~~-~~~~~~~~~~g~~~~~~~~l~~~g~l~~~~~~~H~~~l~ 286 (304)
....+.++.+.++|+++|+++.+|..... .. ..+.+++.+ + ++++.||....
T Consensus 120 ~~~~~~~~~~~~~a~~~~lpv~iH~~~~~~~~-------------~~~~~~~~p-l--~~vi~H~g~~~ 172 (288)
T 2ffi_A 120 DLTGAQWRPLLERIGEQGWHVELHRQVADIPV-------------LVRALQPYG-L--DIVIDHFGRPD 172 (288)
T ss_dssp CTTSTTTHHHHHHHHHHTCEEEECSCTTTHHH-------------HHHHHTTTT-C--CEEESGGGSCC
T ss_pred CcccHHHHHHHHHHHHCCCeEEEeechhhHHH-------------HHHHHHHCC-C--CEEEECCCCCC
Confidence 34556788899999999999999987542 11 234455555 3 56777887765
|
| >2gzx_A Putative TATD related DNAse; deoxyribonuclease, NESG, ZR237, structural GENO PSI, protein structure initiative; 2.20A {Staphylococcus aureus subsp} | Back alignment and structure |
|---|
Probab=95.61 E-value=0.011 Score=49.26 Aligned_cols=30 Identities=17% Similarity=0.237 Sum_probs=24.0
Q ss_pred CHHHHHHHHHHHHHhCCeeeEEecCChhhH
Q 022028 221 TDRLLLETRDMAREFKTGIHMHVAEIPYEN 250 (304)
Q Consensus 221 ~~e~l~~~~~~a~~~~~~~~~H~~E~~~~~ 250 (304)
..+.++...++|+++|+++.+|......+.
T Consensus 107 ~~~~~~~~~~~a~~~~~pv~iH~~~~~~~~ 136 (265)
T 2gzx_A 107 QKEVFRKQIALAKRLKLPIIIHNREATQDC 136 (265)
T ss_dssp HHHHHHHHHHHHHHHTCCEEEEEESCHHHH
T ss_pred HHHHHHHHHHHHHHcCCcEEEEecccHHHH
Confidence 445688899999999999999997654433
|
| >3gg7_A Uncharacterized metalloprotein; structural genomics, unknown function, plasmid, PSI-2, protein structure initiative; 1.50A {Deinococcus radiodurans} SCOP: c.1.9.0 | Back alignment and structure |
|---|
Probab=95.47 E-value=0.0078 Score=50.16 Aligned_cols=55 Identities=13% Similarity=-0.011 Sum_probs=37.0
Q ss_pred HHHHHHHHHHHHHhCCeee-EEecCChhhHHHHHHhcCCCCCHHHHHHHhCCCCCCeeEEEeccCCcchhc
Q 022028 222 DRLLLETRDMAREFKTGIH-MHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEVN 291 (304)
Q Consensus 222 ~e~l~~~~~~a~~~~~~~~-~H~~E~~~~~~~~~~~~g~~~~~~~~l~~~g~l~~~~~~~H~~~l~~~di~ 291 (304)
.+.+++.+++|+++++++. +|.-+...+ .++.+++.+.. ...+.||..-+.++..
T Consensus 103 ~~~F~~ql~lA~e~~lPviSiH~r~a~~~-------------~~~il~~~~~~--~~~v~H~fsG~~e~a~ 158 (254)
T 3gg7_A 103 FAVFQHILRRCEDHGGRILSIHSRRAESE-------------VLNCLEANPRS--GTPILHWYSGSVTELR 158 (254)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECTTCHHH-------------HHHHHHHCGGG--EEEEEETCCSCHHHHH
T ss_pred HHHHHHHHHHHHHcCCCEEEEEcCCcHHH-------------HHHHHHHcCCC--CcEEEEeCCCCHHHHH
Confidence 3457888999999999998 998765433 45555555321 1246698877765554
|
| >2dvt_A Thermophilic reversible gamma-resorcylate decarbo; TIM barrel, lyase; 1.70A {Rhizobium SP} SCOP: c.1.9.15 PDB: 2dvu_A* 2dvx_A* 3s4t_A* | Back alignment and structure |
|---|
Probab=94.93 E-value=0.072 Score=45.65 Aligned_cols=28 Identities=4% Similarity=-0.145 Sum_probs=23.6
Q ss_pred CCCHHHHHHHHHHHHHhCCeeeEEecCC
Q 022028 219 NATDRLLLETRDMAREFKTGIHMHVAEI 246 (304)
Q Consensus 219 ~~~~e~l~~~~~~a~~~~~~~~~H~~E~ 246 (304)
....+.++.+.++|+++|+++.+|....
T Consensus 141 ~~~~~~~~~~~~~a~~~~lpv~iH~~~~ 168 (327)
T 2dvt_A 141 YYDLPQYRPFWGEVEKLDVPFYLHPRNP 168 (327)
T ss_dssp CTTSGGGHHHHHHHHHHTCCEEEECCCC
T ss_pred CCCCcchHHHHHHHHHcCCeEEECCCCC
Confidence 4566778999999999999999998644
|
| >4do7_A Amidohydrolase 2; enzyme function initiative, EFI, structural TIM-barrel fold, putative lactonase; 1.70A {Burkholderia multivorans} PDB: 4dlm_A 4dnm_A* 4dlf_A | Back alignment and structure |
|---|
Probab=94.85 E-value=0.098 Score=44.56 Aligned_cols=51 Identities=12% Similarity=-0.020 Sum_probs=33.6
Q ss_pred CHHHHHHHHHHHHHhCCeeeEEecCCh-hhHHHHHHhcCCCCCHHHHHHHhCCCCCCeeEEEeccCC
Q 022028 221 TDRLLLETRDMAREFKTGIHMHVAEIP-YENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVN 286 (304)
Q Consensus 221 ~~e~l~~~~~~a~~~~~~~~~H~~E~~-~~~~~~~~~~g~~~~~~~~l~~~g~l~~~~~~~H~~~l~ 286 (304)
..+.+....+.++++|+++.+|+.... .+ ..+.+.+.. +-++++.|+....
T Consensus 120 ~~~~~~~~~~~~~~~glpv~ih~~~~~l~~-------------l~~ll~~~P--~l~iVi~H~G~p~ 171 (303)
T 4do7_A 120 DDADFARGVAWLQANDYVYDVLVFERQLPD-------------VQAFCARHD--AHWLVLDHAGKPA 171 (303)
T ss_dssp HCHHHHHHHHHHHHTTCEEEECCCGGGHHH-------------HHHHHHHCC--SSCEEEGGGGCCC
T ss_pred cCHHHHHHHHHHHHCCCeEEEecCHHHHHH-------------HHHHHHHCC--CCCEEEeCCCCCC
Confidence 345678899999999999999986542 22 233444442 1167777877754
|
| >2a3l_A AMP deaminase, AMPD; atampd, AT2G38280, adenosine 5'-monophosphate deaminase, COF 5'-phosphate, structural genomics; HET: CF5; 3.34A {Arabidopsis thaliana} SCOP: c.1.9.1 | Back alignment and structure |
|---|
Probab=93.96 E-value=0.006 Score=57.88 Aligned_cols=56 Identities=20% Similarity=0.193 Sum_probs=38.6
Q ss_pred HHHHHH-hCC---eeeEEecCChhhHHHHHHhcCCCCCHHHHHHHhCCCCCCeeEEEeccCCcchh--c-----------
Q 022028 229 RDMARE-FKT---GIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEV--N----------- 291 (304)
Q Consensus 229 ~~~a~~-~~~---~~~~H~~E~~~~~~~~~~~~g~~~~~~~~l~~~g~l~~~~~~~H~~~l~~~di--~----------- 291 (304)
+..+++ .|+ ++++|++|+.. ++++.+. +|+++. ++||+++.+++. +
T Consensus 504 Ln~ar~~~Gl~~i~~t~HaGE~~~---------------~e~l~~a-lLg~~R-IgHGv~l~edp~Li~lla~~~I~vev 566 (701)
T 2a3l_A 504 LNKLRESKGMTTITLRPHSGEAGD---------------IDHLAAT-FLTCHS-IAHGINLRKSPVLQYLYYLAQIGLAM 566 (701)
T ss_dssp HHHHHTTTTCCCCEECCCCSSSSC---------------THHHHHH-HHHCSS-CSCCGGGGGCHHHHHHHHHHTCCEEE
T ss_pred HHHHHHHcCCCCCCcccccCCCCC---------------HHHHHHH-hcCCCe-EEEEeecccCHHHHHHHHHcCCcEEE
Confidence 345554 677 89999999853 2222222 366665 699999998883 3
Q ss_pred cccccccccc
Q 022028 292 CTFGNFKYAV 301 (304)
Q Consensus 292 ~p~sN~~l~~ 301 (304)
||.||..++.
T Consensus 567 CP~SN~kl~~ 576 (701)
T 2a3l_A 567 SPLSNNSLFL 576 (701)
T ss_dssp CHHHHTTTTC
T ss_pred Cccchhhhcc
Confidence 9999997754
|
| >3irs_A Uncharacterized protein BB4693; structural genomics, PSI-2, protein structure initiative, TI protein; HET: GOL; 1.76A {Bordetella bronchiseptica} PDB: 3k4w_A | Back alignment and structure |
|---|
Probab=93.64 E-value=2.1 Score=35.92 Aligned_cols=99 Identities=15% Similarity=0.077 Sum_probs=54.7
Q ss_pred HHHHHhcCcceeecCCC-------CCHHHHHHHHHHcCCeEEeecccccCCCCCCCCcccCChHHHHHHHHHHHHHHcCC
Q 022028 131 GIELIHSGVTCFAEAGG-------QHVSEMAKAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHA 203 (304)
Q Consensus 131 ~~~~l~~GvTtv~d~~~-------~~~~~~~~~~~~~gir~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (304)
+..+-..||...+-+.. ..-+.+.+.+++..-|.+.... +.+. ..++.+++.++ ++..
T Consensus 53 l~~md~~GV~~~V~~~~~~~~~~~~~N~~~~~~~~~~p~r~~~~~~-------v~p~----~~~~a~~eL~~-~~~~--- 117 (291)
T 3irs_A 53 FEEMAAAGIEQGVCVGRNSSVLGSVSNADVAAVAKAYPDKFHPVGS-------IEAA----TRKEAMAQMQE-ILDL--- 117 (291)
T ss_dssp HHHHHHTTCCEEEEECCEETTTEECCHHHHHHHHHHSTTTEEEEEE-------CCCS----SHHHHHHHHHH-HHHT---
T ss_pred HHHHHHCCCCEEEEcCCCccccccccHHHHHHHHHHCCCcEEEEEe-------cCcc----CHHHHHHHHHH-HHhC---
Confidence 45566788877654321 2345566666666544421111 1121 12334444444 3321
Q ss_pred CCCCeEEEEeeCc---ccCCCHHHHHHHHHHHHHhCCeeeEEecCC
Q 022028 204 ADGRIRIWFGIRQ---IMNATDRLLLETRDMAREFKTGIHMHVAEI 246 (304)
Q Consensus 204 ~~~~i~~~~~~~~---~~~~~~e~l~~~~~~a~~~~~~~~~H~~E~ 246 (304)
+...+.+.+.. .....++.+..+.++|.++|+++.+|....
T Consensus 118 --g~~Gi~~~~~~~~~~~~~~d~~~~~~~~~a~e~glpv~iH~~~~ 161 (291)
T 3irs_A 118 --GIRIVNLEPGVWATPMHVDDRRLYPLYAFCEDNGIPVIMMTGGN 161 (291)
T ss_dssp --TCCCEEECGGGSSSCCCTTCGGGHHHHHHHHHTTCCEEEECSSS
T ss_pred --CCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHcCCeEEEeCCCC
Confidence 33334444321 233456778899999999999999998764
|
| >3e2v_A 3'-5'-exonuclease; structural genomics, hydrolase, PSI-2, protein initiative, NEW YORK SGX research center for structural GEN nysgxrc; 1.50A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=92.71 E-value=0.94 Score=40.05 Aligned_cols=27 Identities=7% Similarity=0.012 Sum_probs=21.6
Q ss_pred HHHHHHHHHHHh----CCeeeEEecCChhhH
Q 022028 224 LLLETRDMAREF----KTGIHMHVAEIPYEN 250 (304)
Q Consensus 224 ~l~~~~~~a~~~----~~~~~~H~~E~~~~~ 250 (304)
.+++-+++|+++ ++++.+|.-+...+.
T Consensus 180 ~F~~QL~LA~e~~~~~~lPv~IH~R~A~~d~ 210 (401)
T 3e2v_A 180 FFEEQLKISCLNDKLSSYPLFLHMRSACDDF 210 (401)
T ss_dssp HHHHHHHHTTSSHHHHTSCEEEEEESCHHHH
T ss_pred HHHHHHHHHHhhhccCCCeEEEEecchHHHH
Confidence 466778899999 999999997765543
|
| >2f6k_A Metal-dependent hydrolase; metal dependent hydrolyse, aminohydro_2, ACMDS, ACMS, trypto metabolism, quinolinic acid, QUIN; 2.50A {Lactobacillus plantarum} SCOP: c.1.9.15 | Back alignment and structure |
|---|
Probab=91.55 E-value=0.58 Score=39.46 Aligned_cols=28 Identities=11% Similarity=0.001 Sum_probs=23.5
Q ss_pred CCHHHHHHHHHHHHHhCCeeeEEecCCh
Q 022028 220 ATDRLLLETRDMAREFKTGIHMHVAEIP 247 (304)
Q Consensus 220 ~~~e~l~~~~~~a~~~~~~~~~H~~E~~ 247 (304)
..++.++.+.++|+++++++.+|.....
T Consensus 132 ~~~~~~~~~~~~a~~~~lpv~iH~~~~~ 159 (307)
T 2f6k_A 132 FGSPVLERVYQELDARQAIVALHPNEPA 159 (307)
T ss_dssp TTCGGGHHHHHHHHTTTCEEEEECCCCS
T ss_pred CCcHhHHHHHHHHHHcCCeEEECCCCCc
Confidence 4556788999999999999999987543
|
| >3cjp_A Predicted amidohydrolase, dihydroorotase family; structural genomics, protein structure initiative; 1.85A {Clostridium acetobutylicum atcc 824} | Back alignment and structure |
|---|
Probab=87.41 E-value=1.9 Score=35.60 Aligned_cols=25 Identities=12% Similarity=0.024 Sum_probs=21.8
Q ss_pred CHHHHHHHHHHHHHh-CCeeeEEecC
Q 022028 221 TDRLLLETRDMAREF-KTGIHMHVAE 245 (304)
Q Consensus 221 ~~e~l~~~~~~a~~~-~~~~~~H~~E 245 (304)
..+.++.+.++|+++ |+++.+|...
T Consensus 128 ~~~~~~~~~~~a~~~~~lpv~iH~~~ 153 (272)
T 3cjp_A 128 QIKSLKPIFKYSMDSGSLPIWIHAFN 153 (272)
T ss_dssp CGGGGHHHHHHHHHTTCCCEEECCST
T ss_pred ccHHHHHHHHHHHhccCCcEEEeCCC
Confidence 556788999999999 9999999864
|
| >2gwg_A 4-oxalomesaconate hydratase; TIM-barrel like protein, structural genomics, PSI, protein S initiative; 1.80A {Rhodopseudomonas palustris} SCOP: c.1.9.15 | Back alignment and structure |
|---|
Probab=86.00 E-value=0.88 Score=39.36 Aligned_cols=28 Identities=21% Similarity=0.228 Sum_probs=23.0
Q ss_pred CCHHHHHHHHHHHHHhCCeeeEEecCCh
Q 022028 220 ATDRLLLETRDMAREFKTGIHMHVAEIP 247 (304)
Q Consensus 220 ~~~e~l~~~~~~a~~~~~~~~~H~~E~~ 247 (304)
..++.++.+.++|.++|+++.+|.....
T Consensus 156 l~d~~~~p~~~~a~e~~lpv~iH~~~~~ 183 (350)
T 2gwg_A 156 LTDRIWYPIYEKMVELEIPAMIHVSTSC 183 (350)
T ss_dssp TTSGGGHHHHHHHHHHTCCEEECCCC--
T ss_pred CCCHHHHHHHHHHHHcCCeEEECCCCCC
Confidence 5667788999999999999999987653
|
| >1nfg_A D-hydantoinase; TIM barrel, hydrolase; HET: KCX; 2.70A {Ralstonia pickettii} SCOP: b.92.1.3 c.1.9.6 | Back alignment and structure |
|---|
Probab=82.91 E-value=0.85 Score=40.81 Aligned_cols=63 Identities=10% Similarity=0.040 Sum_probs=42.1
Q ss_pred cCCCHHHHHHHHHHHHHhCCeeeE-EecCChhhHHHHHHhcCCCCCHHHHHHHhCCCCCCeeEEEeccCCcchhcc
Q 022028 218 MNATDRLLLETRDMAREFKTGIHM-HVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEVNC 292 (304)
Q Consensus 218 ~~~~~e~l~~~~~~a~~~~~~~~~-H~~E~~~~~~~~~~~~g~~~~~~~~l~~~g~l~~~~~~~H~~~l~~~di~~ 292 (304)
..+..+.++++.++|++.|+++++ |+. +..+.+ .++.+++.|+----.++.||.+++++++..
T Consensus 212 ~~~~~~~~~~~~~~a~~~g~~~~~~H~~-~~~~~~-----------~~~~~~~~G~~v~~~~~~h~~~~~~~~~~~ 275 (457)
T 1nfg_A 212 PRVEAEATARALALAEIVNAPIYIVHVT-CEESLE-----------EVMRAKSRGVRALAETCTHYLYLTKEDLER 275 (457)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCEEECCCC-SHHHHH-----------HHHHHHHHTCCEEECEEGGGGTCCGGGGGC
T ss_pred HHHHHHHHHHHHHHHHHHCCCEEEEeCC-cHHHHH-----------HHHHHHHcCCeEEEEEchHHhEeCHHHhcc
Confidence 345667888999999999999887 876 333333 233344455410112579999999998853
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 304 | ||||
| d2uz9a2 | 313 | c.1.9.9 (A:76-388) Guanine deaminase {Human (Homo | 6e-30 | |
| d2i9ua2 | 310 | c.1.9.9 (A:67-376) Guanine deaminase {Clostridium | 2e-24 | |
| d1p1ma2 | 281 | c.1.9.9 (A:50-330) Hypothetical protein TM0936, pr | 2e-24 | |
| d2ooda2 | 325 | c.1.9.9 (A:73-397) Guanine deaminase {Bradyrhizobi | 9e-24 | |
| d2paja2 | 336 | c.1.9.9 (A:70-405) Hypothetical protein GOS_194309 | 8e-19 | |
| d2imra2 | 308 | c.1.9.16 (A:91-398) Hypothetical protein DR0824 {D | 5e-15 | |
| d2p9ba1 | 118 | b.92.1.10 (A:9-70,A:395-450) Uncharacterized prote | 1e-07 | |
| d1ra0a2 | 320 | c.1.9.5 (A:56-375) Cytosine deaminase catalytic do | 1e-07 | |
| d2p9ba2 | 324 | c.1.9.17 (A:71-394) Uncharacterized protein BL1453 | 4e-07 | |
| d2r8ca1 | 102 | b.92.1.9 (A:2-57,A:369-414) Uncharacterized protei | 4e-06 | |
| d1ynya1 | 127 | b.92.1.3 (A:2-52,A:385-460) D-hydantoinase {Bacill | 7e-06 | |
| d2vhla1 | 91 | b.92.1.5 (A:3-57,A:359-394) N-acetylglucosamine-6- | 1e-05 | |
| d1onwa1 | 105 | b.92.1.7 (A:1-62,A:347-389) Isoaspartyl dipeptidas | 1e-05 | |
| d2puza2 | 301 | c.1.9.17 (A:80-380) Imidazolonepropionase {Agrobac | 2e-05 | |
| d1yrra1 | 85 | b.92.1.5 (A:1-53,A:351-382) N-acetylglucosamine-6- | 4e-05 | |
| d2puza1 | 103 | b.92.1.10 (A:17-79,A:381-420) Imidazolonepropionas | 4e-04 | |
| d2q09a2 | 301 | c.1.9.17 (A:66-366) Probable 4-imidazolone-5-propa | 4e-04 | |
| d1m7ja1 | 55 | b.92.1.6 (A:7-61) N-acyl-D-aminoacid amidohydrolas | 4e-04 | |
| d2qs8a2 | 310 | c.1.9.18 (A:64-373) Xaa-Pro dipeptidase {Alteromon | 0.004 |
| >d2uz9a2 c.1.9.9 (A:76-388) Guanine deaminase {Human (Homo sapiens) [TaxId: 9606]} Length = 313 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: Metallo-dependent hydrolases family: SAH/MTA deaminase-like domain: Guanine deaminase species: Human (Homo sapiens) [TaxId: 9606]
Score = 113 bits (282), Expect = 6e-30
Identities = 47/228 (20%), Positives = 87/228 (38%), Gaps = 6/228 (2%)
Query: 80 PGFVNTHVHTSQQLAKGIADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGI-ELIHSG 138
PG V+TH+H SQ G + D+ L+ WL +P E D + + +G
Sbjct: 1 PGLVDTHIHASQYSFAGSSIDLPLLEWLTKYTFPAEHRFQNIDFAEEVYTRVVRRTLKNG 60
Query: 139 VTCFAEAGGQH---VSEMAKAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKE 195
T H +A + G RA + + MD + TT++ I+ +
Sbjct: 61 TTTACYFATIHTDSSLLLADITDKFGQRAFVGKVCMDLND--TFPEYKETTEESIKETER 118
Query: 196 LYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMD 255
++ R++ R ++ ++ L+ E ++A+ I H++E E + V +
Sbjct: 119 FVSEMLQKNYSRVKPIVTPRFSLSCSETLMGELGNIAKTRDLHIQSHISENRDEVEAVKN 178
Query: 256 TRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEVNCTFGNFKYAVHQ 303
+ DK L N + AH +++ E+N H
Sbjct: 179 LYPSYKNYTSVYDKNNLLTNKTVMAHGCYLSAEELNVFHERGASIAHC 226
|
| >d2i9ua2 c.1.9.9 (A:67-376) Guanine deaminase {Clostridium acetobutylicum [TaxId: 1488]} Length = 310 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: Metallo-dependent hydrolases family: SAH/MTA deaminase-like domain: Guanine deaminase species: Clostridium acetobutylicum [TaxId: 1488]
Score = 98.7 bits (244), Expect = 2e-24
Identities = 49/229 (21%), Positives = 89/229 (38%), Gaps = 9/229 (3%)
Query: 80 PGFVNTHVHTSQQLAKGIADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGI-ELIHSG 138
PG + H H SQ GI D +L+ WL++ +P E+ D T I +LI +G
Sbjct: 1 PGMNDLHAHASQYKNLGIGMDKELLPWLNNYTFPEEAKFLNVDYAKKTYGRLIKDLIKNG 60
Query: 139 VTC---FAEAGGQHVSEMAKAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKE 195
T FA E+ + G+ A + + MD + + +E
Sbjct: 61 TTRVALFATLHKDSTIELFNMLIKSGIGAYVGKVNMDYN---CPDYLTENYITSLNDTEE 117
Query: 196 LYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMD 255
+ K+ ++ ++ R + + ++ L+ ++ +++ + H++E E VV
Sbjct: 118 IILKYKDKSN-IVKPIITPRFVPSCSNELMDGLGKLSYKYRLPVQSHLSENLDEIAVVKS 176
Query: 256 TRKVDHGTVTFLDKIE-FLQNNLLSAHTVWVNHTEVNCTFGNFKYAVHQ 303
K + DK F L AH + + E+N N VH
Sbjct: 177 LHKKSNFYGEVYDKFGLFGNTPTLMAHCIHSSKEEINLIKRNNVTIVHC 225
|
| >d1p1ma2 c.1.9.9 (A:50-330) Hypothetical protein TM0936, probable catalytic domain {Thermotoga maritima [TaxId: 2336]} Length = 281 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: Metallo-dependent hydrolases family: SAH/MTA deaminase-like domain: Hypothetical protein TM0936, probable catalytic domain species: Thermotoga maritima [TaxId: 2336]
Score = 98.2 bits (243), Expect = 2e-24
Identities = 43/175 (24%), Positives = 72/175 (41%), Gaps = 11/175 (6%)
Query: 81 GFVNTHVHTSQQLAKGIADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVT 140
NTH H L +G+A+D+ WL ++ P E +TE+ +Y T+L +E+ G+
Sbjct: 1 ALFNTHTHAPMTLLRGVAEDLSFEEWLFSKVLPIEDRLTEKMAYYGTILAQMEMARHGIA 60
Query: 141 CFAEAGGQHVSEMAKAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYAKH 200
F + H +AKAV G+RA L + +D D +
Sbjct: 61 GFVD-MYFHEEWIAKAVRDFGMRALLTRGLVDSN----------GDDGGRLEENLKLYNE 109
Query: 201 HHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMD 255
+ +GRI + FG ++ L D A+ + +H+ E E + D
Sbjct: 110 WNGFEGRIFVGFGPHSPYLCSEEYLKRVFDTAKSLNAPVTIHLYETSKEEYDLED 164
|
| >d2ooda2 c.1.9.9 (A:73-397) Guanine deaminase {Bradyrhizobium japonicum [TaxId: 375]} Length = 325 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: Metallo-dependent hydrolases family: SAH/MTA deaminase-like domain: Guanine deaminase species: Bradyrhizobium japonicum [TaxId: 375]
Score = 96.9 bits (239), Expect = 9e-24
Identities = 41/226 (18%), Positives = 80/226 (35%), Gaps = 5/226 (2%)
Query: 80 PGFVNTHVHTSQQLAKGIADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGI-ELIHSG 138
PGF++ H+H Q G + L+ WL I+P E + + + + L+ +G
Sbjct: 1 PGFIDGHIHLPQTRVLGAYGE-QLLPWLQKSIYPEEIKYKDRNYAREGVKRFLDALLAAG 59
Query: 139 VTCFAEAGGQHVSEMAKAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYA 198
T + E R V + + + + + T ++ + K L A
Sbjct: 60 TTTCQAFTSSSPVATEELFEEASRRNMRVIAGLTGIDRNAPAEFIDTPENFYRDSKRLIA 119
Query: 199 KHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFK-TGIHMHVAEIPYENQVVMDTR 257
++H GR R A+ LL + + E ++ H++E P E V+
Sbjct: 120 QYHD--KGRNLYAITPRFAFGASPELLKACQRLKHEHPDCWVNTHISENPAECSGVLVEH 177
Query: 258 KVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEVNCTFGNFKYAVHQ 303
+ +K + + H V++++ E V
Sbjct: 178 PDCQDYLGVYEKFDLVGPKFSGGHGVYLSNNEFRRMSKKGAAVVFC 223
|
| >d2paja2 c.1.9.9 (A:70-405) Hypothetical protein GOS_1943094 {Environmental samples} Length = 336 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: Metallo-dependent hydrolases family: SAH/MTA deaminase-like domain: Hypothetical protein GOS 1943094 species: Environmental samples
Score = 83.0 bits (203), Expect = 8e-19
Identities = 43/179 (24%), Positives = 70/179 (39%), Gaps = 16/179 (8%)
Query: 80 PGFVNTHVHTSQQLAKGI--ADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHS 137
P +VNTH H Q L KG D L WL + + + E ++ + IEL S
Sbjct: 1 PAWVNTHHHLFQSLLKGEPAGLDATLTPWLAATPYRFRALFDERRFRLAARIGLIELARS 60
Query: 138 GVTCFAEAGGQH--------VSEMAKAVELLGLRACLVQSTMDCG----EGLPASWAVRT 185
G A+ + + + + E LGLR L++ LP + T
Sbjct: 61 GCATVADHNYVYYPGMPFDSSAILFEEAEKLGLRFVLLRGGATQTRQLEADLPTALRPET 120
Query: 186 TDDCIQSQKELYAKHHHAADG--RIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMH 242
D + + L A++H A+ R + + + + R + ET +AR +H H
Sbjct: 121 LDAYVADIERLAARYHDASPRAMRRVVMAPTTVLYSISPREMRETAAVARRLGLRMHSH 179
|
| >d2imra2 c.1.9.16 (A:91-398) Hypothetical protein DR0824 {Deinococcus radiodurans [TaxId: 1299]} Length = 308 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: Metallo-dependent hydrolases family: DR0824-like domain: Hypothetical protein DR0824 species: Deinococcus radiodurans [TaxId: 1299]
Score = 71.7 bits (174), Expect = 5e-15
Identities = 26/218 (11%), Positives = 49/218 (22%), Gaps = 15/218 (6%)
Query: 80 PGFVNTHVHTSQQLAKGIADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGV 139
P VN H H + A W+ + + + L G
Sbjct: 1 PPPVNAHTHLDMSAYEFQAL--PYFQWIPEVVIRGRH----LRGVAAAQAGADTLTRLGA 54
Query: 140 TCFAEAGGQHVSEMAKAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYAK 199
+ M + L L ++ D+ + + +
Sbjct: 55 GGVGDIVW-APEVMDALLAREDLSGTLYFEVLNPFPD--------KADEVFAAARTHLER 105
Query: 200 HHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKV 259
+R+ + RL+ D A + +HVAE P E ++
Sbjct: 106 WRRLERPGLRLGLSPHTPFTVSHRLMRLLSDYAAGEGLPLQIHVAEHPTELEMFRTGGGP 165
Query: 260 DHGTVTFLDKIEFLQNNLLSAHTVWVNHTEVNCTFGNF 297
L + + G
Sbjct: 166 LWDNRMPALYPHTLAEVIGREPGPDLTPVRYLDELGVL 203
|
| >d2p9ba1 b.92.1.10 (A:9-70,A:395-450) Uncharacterized protein BL1453 {Bifidobacterium longum [TaxId: 216816]} Length = 118 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Composite domain of metallo-dependent hydrolases superfamily: Composite domain of metallo-dependent hydrolases family: Imidazolonepropionase-like domain: Uncharacterized protein BL1453 species: Bifidobacterium longum [TaxId: 216816]
Score = 47.1 bits (111), Expect = 1e-07
Identities = 16/69 (23%), Positives = 27/69 (39%), Gaps = 4/69 (5%)
Query: 21 MILHNAVIVTMDKESRVFRNGGVFVVQD-RIKAIGQSADILQQFSQMADQIIDLQSQILL 79
L +A IVT DK + RN + V D RI+ + S + +D +I++
Sbjct: 6 FALAHATIVTGDKAGTILRNMTIVVGADGRIEQVAPSIET---SIPAEYHYLDGTGKIVM 62
Query: 80 PGFVNTHVH 88
+
Sbjct: 63 LEVGKSADL 71
|
| >d1ra0a2 c.1.9.5 (A:56-375) Cytosine deaminase catalytic domain {Escherichia coli [TaxId: 562]} Length = 320 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: Metallo-dependent hydrolases family: Cytosine deaminase catalytic domain domain: Cytosine deaminase catalytic domain species: Escherichia coli [TaxId: 562]
Score = 49.9 bits (117), Expect = 1e-07
Identities = 24/225 (10%), Positives = 59/225 (26%), Gaps = 9/225 (4%)
Query: 82 FVNTHVHTSQQLAKGIAD---DVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSG 138
FV H+H G + L + +R ++ +T +D I +G
Sbjct: 2 FVEPHIHLDTTQTAGQPNWNQSGTLFEGI-ERWAERKALLTHDDVKQRAWQTLKWQIANG 60
Query: 139 VTCFAEAGGQHVSEMAKAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYA 198
+ + + +L ++ + P + + + L
Sbjct: 61 IQHVRTHVDVSDATLTALKAMLEVKQEVAPWIDLQIVAFPQEGILSYPNG-----EALLE 115
Query: 199 KHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRK 258
+ + L +T +A+++ I +H EI E ++T
Sbjct: 116 EALRLGADVVGAIPHFEFTREYGVESLHKTFALAQKYDRLIDVHCDEIDDEQSRFVETVA 175
Query: 259 VDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEVNCTFGNFKYAVHQ 303
++ + ++ + V
Sbjct: 176 ALAHHEGMGARVTASHTTAMHSYNGAYTSRLFRLLKMSGINFVAN 220
|
| >d2p9ba2 c.1.9.17 (A:71-394) Uncharacterized protein BL1453 {Bifidobacterium longum [TaxId: 216816]} Length = 324 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: Metallo-dependent hydrolases family: Imidazolonepropionase-like domain: Uncharacterized protein BL1453 species: Bifidobacterium longum [TaxId: 216816]
Score = 48.5 bits (113), Expect = 4e-07
Identities = 20/177 (11%), Positives = 44/177 (24%), Gaps = 2/177 (1%)
Query: 80 PGFVNTHVHTSQQLAKGIADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGV 139
PG +N H H Q + S + + + L+ SGV
Sbjct: 1 PGLINAHTHLFSQGKPL-NPKLATPKGQRMVATFAHSPLGKPYMAATVKHNATTLLESGV 59
Query: 140 TCFAEAGGQHVSEMAKAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYAK 199
T G E+ + + L + G + + S A+
Sbjct: 60 TTIRTLGDVG-YEVVTLRDQIDAGQILGPRILASGPLMAIPEGHGAPLIALTSGTPEEAR 118
Query: 200 HHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDT 256
A + + + + + + + ++ V++
Sbjct: 119 TAVAQNLKAGVNAIKIAATGGVTDAQEIGEAGSPQMSVEQMRAICDEAHQYGVIVGA 175
|
| >d2r8ca1 b.92.1.9 (A:2-57,A:369-414) Uncharacterized protein EAJ56179 {Unidentified organism [TaxId: 32644]} Length = 102 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Composite domain of metallo-dependent hydrolases superfamily: Composite domain of metallo-dependent hydrolases family: Zn-dependent arginine carboxypeptidase-like domain: Uncharacterized protein EAJ56179 species: Unidentified organism [TaxId: 32644]
Score = 42.7 bits (100), Expect = 4e-06
Identities = 10/87 (11%), Positives = 28/87 (32%), Gaps = 6/87 (6%)
Query: 19 STMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQIL 78
+T + N ++ D + + + + I+ + +ID++ + +
Sbjct: 1 TTFLFRNGALLDPDHP-DLLQGFEILIEDGFIREVSDKPIKSS-----NAHVIDVKGKTI 54
Query: 79 LPGFVNTHVHTSQQLAKGIADDVDLMT 105
+P V + VD +
Sbjct: 55 MPRIVPGAHADVLVVDGNPLKSVDCLL 81
|
| >d1ynya1 b.92.1.3 (A:2-52,A:385-460) D-hydantoinase {Bacillus sp. AR9 [TaxId: 301298]} Length = 127 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Composite domain of metallo-dependent hydrolases superfamily: Composite domain of metallo-dependent hydrolases family: Hydantoinase (dihydropyrimidinase) domain: D-hydantoinase species: Bacillus sp. AR9 [TaxId: 301298]
Score = 42.7 bits (100), Expect = 7e-06
Identities = 19/130 (14%), Positives = 37/130 (28%), Gaps = 11/130 (8%)
Query: 21 MILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLP 80
+ +VT V + +R+ AIG + + ID ++P
Sbjct: 2 KWIRGGTVVTAADT----YQADVLIEGERVVAIGHQLSV------NGAEEIDATGCYVIP 51
Query: 81 GFVNTHVHTSQQLAKGIADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVT 140
V + ++ P+E M +S L G ++
Sbjct: 52 IAVGSDADIVIFDPHVKRTLSVETHHMNVDYNPFE-GMEVYGEVVSVLSRGSFVVRDKQF 110
Query: 141 CFAEAGGQHV 150
GQ++
Sbjct: 111 VGQAGSGQYI 120
|
| >d1onwa1 b.92.1.7 (A:1-62,A:347-389) Isoaspartyl dipeptidase {Escherichia coli [TaxId: 562]} Length = 105 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Composite domain of metallo-dependent hydrolases superfamily: Composite domain of metallo-dependent hydrolases family: Isoaspartyl dipeptidase domain: Isoaspartyl dipeptidase species: Escherichia coli [TaxId: 562]
Score = 41.1 bits (96), Expect = 1e-05
Identities = 12/72 (16%), Positives = 25/72 (34%), Gaps = 7/72 (9%)
Query: 17 SSSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQ 76
++ +L A + + V V +I A+ + + ++DL Q
Sbjct: 6 AAGFTLLQGAHLYAPED----RGICDVLVANGKIIAVASN---IPSDIVPNCTVVDLSGQ 58
Query: 77 ILLPGFVNTHVH 88
IL P + +
Sbjct: 59 ILCPEILPGNDA 70
|
| >d2puza2 c.1.9.17 (A:80-380) Imidazolonepropionase {Agrobacterium tumefaciens [TaxId: 358]} Length = 301 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: Metallo-dependent hydrolases family: Imidazolonepropionase-like domain: Imidazolonepropionase species: Agrobacterium tumefaciens [TaxId: 358]
Score = 43.4 bits (100), Expect = 2e-05
Identities = 26/244 (10%), Positives = 65/244 (26%), Gaps = 23/244 (9%)
Query: 80 PGFVNTHVHTSQQLAKGIADDVDLMTWLHDRIW----------PYESNMTEEDSYISTLL 129
P ++ H H + + ++ L ++ I +++E L
Sbjct: 1 PALIDCHTHLVFGGNRAMEFEMRLNGATYEEIAKAGGGIVSSVRDTRALSDEVLVAQALP 60
Query: 130 CGIELIHSGVT------CFAEAGGQHVSEMAKAVELLGLRACLVQSTMDCGEGLPASWAV 183
L+ GV+ + + + A L LR + ++ PA +
Sbjct: 61 RLDTLLSEGVSTIEIKSGYGLDIETELKMLRVARRLETLRPVRIVTSYLAAHATPADYKG 120
Query: 184 RTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHV 243
R D K H +G G + + + + + A++ + +H
Sbjct: 121 RNADYITDVVLPGLEKAHA--EGLADAVDGFCEGIAFSVKEIDRVFAAAQQRGLPVKLHA 178
Query: 244 AEIPYENQ----VVMDTRKVDHGTVTFLDKIE-FLQNNLLSAHTVWVNHTEVNCTFGNFK 298
++ + DH + + ++ + +
Sbjct: 179 EQLSNLGGAELAASYNALSADHLEYLDETGAKALAKAGTVAVLLPGAFYALREKQLPPVQ 238
Query: 299 YAVH 302
Sbjct: 239 ALRD 242
|
| >d1yrra1 b.92.1.5 (A:1-53,A:351-382) N-acetylglucosamine-6-phosphate deacetylase, NagA {Escherichia coli [TaxId: 562]} Length = 85 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Composite domain of metallo-dependent hydrolases superfamily: Composite domain of metallo-dependent hydrolases family: N-acetylglucosamine-6-phosphate deacetylase, NagA domain: N-acetylglucosamine-6-phosphate deacetylase, NagA species: Escherichia coli [TaxId: 562]
Score = 39.3 bits (91), Expect = 4e-05
Identities = 11/66 (16%), Positives = 17/66 (25%), Gaps = 8/66 (12%)
Query: 23 LHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGF 82
L I T + + V + IK++ + L IL P
Sbjct: 4 LTQGRIFTGHE---FLDDHAVVIADGLIKSVCP-----VAELPPEIEQRSLNGAILSPTL 55
Query: 83 VNTHVH 88
V
Sbjct: 56 AAGKVA 61
|
| >d2puza1 b.92.1.10 (A:17-79,A:381-420) Imidazolonepropionase {Agrobacterium tumefaciens [TaxId: 358]} Length = 103 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Composite domain of metallo-dependent hydrolases superfamily: Composite domain of metallo-dependent hydrolases family: Imidazolonepropionase-like domain: Imidazolonepropionase species: Agrobacterium tumefaciens [TaxId: 358]
Score = 37.2 bits (86), Expect = 4e-04
Identities = 14/73 (19%), Positives = 26/73 (35%), Gaps = 4/73 (5%)
Query: 19 STMILHNAVIVTMDKESRVF---RNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQS 75
+T + NA + T++ N + V RI G +D+ S AD+ D
Sbjct: 1 ATALWRNAQLATLNPAMDGIGAVENAVIAVRNGRIAFAGPESDLPDDLST-ADETTDCGG 59
Query: 76 QILLPGFVNTHVH 88
+ + +
Sbjct: 60 RWITLEAGKSADF 72
|
| >d2q09a2 c.1.9.17 (A:66-366) Probable 4-imidazolone-5-propanoate amidohydrolase GOS_1928421 {Environmental samples} Length = 301 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: Metallo-dependent hydrolases family: Imidazolonepropionase-like domain: Probable 4-imidazolone-5-propanoate amidohydrolase GOS 1928421 species: Environmental samples
Score = 39.1 bits (89), Expect = 4e-04
Identities = 31/236 (13%), Positives = 66/236 (27%), Gaps = 24/236 (10%)
Query: 80 PGFVNTHVH-----------TSQQLAKGIADDVDLMTWLHDRIWPYESNMTEEDSYISTL 128
PG ++ H H +Q A+ + + +E+ + L
Sbjct: 1 PGLIDCHTHLIFAGSRAEEFELRQKGVPYAEIARKGGGIISTV-RATRAASEDQLFELAL 59
Query: 129 LCGIELIHSGVTCFAEAGGQHVSEMAKAVELLGLRACL------VQSTMDCGEGLPASWA 182
LI GVT G ++ + L R V++T+ +P +
Sbjct: 60 PRVKSLIREGVTTVEIKSGYGLTLEDELKMLRVARRLGEALPIRVKTTLLAAHAVPPEYR 119
Query: 183 VRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMH 242
+E+ A G + + + + A ++ + H
Sbjct: 120 DDPDSWVETICQEIIPAAAEA--GLADAVDVFCEHIGFSLAQTEQVYLAADQYGLAVKGH 177
Query: 243 VAEIPYENQ----VVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEVNCTF 294
+ ++ VDH + I+ L + + A + + T
Sbjct: 178 MDQLSNLGGSTLAANFGALSVDHLEYLDPEGIQALAHRGVVATLLPTAFYFLKETK 233
|
| >d1m7ja1 b.92.1.6 (A:7-61) N-acyl-D-aminoacid amidohydrolase {Alcaligenes faecalis [TaxId: 511]} Length = 55 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Composite domain of metallo-dependent hydrolases superfamily: Composite domain of metallo-dependent hydrolases family: D-aminoacylase domain: N-acyl-D-aminoacid amidohydrolase species: Alcaligenes faecalis [TaxId: 511]
Score = 35.5 bits (82), Expect = 4e-04
Identities = 14/60 (23%), Positives = 24/60 (40%), Gaps = 8/60 (13%)
Query: 21 MILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLP 80
IL ++ + R V V DRI A+G + A + ID+ +++ P
Sbjct: 4 YILSGGTVIDGT--NAPGRLADVGVRGDRIAAVGDLSAS------SARRRIDVAGKVVSP 55
|
| >d2qs8a2 c.1.9.18 (A:64-373) Xaa-Pro dipeptidase {Alteromonas macleodii [TaxId: 28108]} Length = 310 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: Metallo-dependent hydrolases family: Zn-dependent arginine carboxypeptidase-like domain: Xaa-Pro dipeptidase species: Alteromonas macleodii [TaxId: 28108]
Score = 35.8 bits (80), Expect = 0.004
Identities = 24/219 (10%), Positives = 51/219 (23%), Gaps = 22/219 (10%)
Query: 81 GFVNTHVHTSQQLAKGIADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVT 140
G ++ HVH Q+ + + + + SG T
Sbjct: 1 GLMDMHVHFGQEYQSKAQAPIKVEREMQAILATQH---------------AYVTFKSGFT 45
Query: 141 CFAEAGGQHVSEMAKAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYAKH 200
+ G + + LR + + A + TT
Sbjct: 46 TVRQVGDSG-------LVAISLRDAINSGKLAGPRIFAAGKTIATTGGHADPTNGKAVDD 98
Query: 201 HHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVD 260
+ + G ++ A + + D + TG + VA+ Q +
Sbjct: 99 YDYPVPEQGVVNGPYEVYAAVRQRYKDGADGIKITVTGGVLSVAKSGQNPQFTQEEVDAV 158
Query: 261 HGTVTFLDKIEFLQNNLLSAHTVWVNHTEVNCTFGNFKY 299
+ + + + G F
Sbjct: 159 VSAAKDYGMWVAVHAHGAEGMKRAIKAGVDSIEHGTFMD 197
|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 304 | |||
| d2i9ua2 | 310 | Guanine deaminase {Clostridium acetobutylicum [Tax | 99.97 | |
| d1p1ma2 | 281 | Hypothetical protein TM0936, probable catalytic do | 99.97 | |
| d2uz9a2 | 313 | Guanine deaminase {Human (Homo sapiens) [TaxId: 96 | 99.96 | |
| d2paja2 | 336 | Hypothetical protein GOS_1943094 {Environmental sa | 99.91 | |
| d2imra2 | 308 | Hypothetical protein DR0824 {Deinococcus radiodura | 99.86 | |
| d2ooda2 | 325 | Guanine deaminase {Bradyrhizobium japonicum [TaxId | 99.78 | |
| d2p9ba1 | 118 | Uncharacterized protein BL1453 {Bifidobacterium lo | 99.72 | |
| d1yrra1 | 85 | N-acetylglucosamine-6-phosphate deacetylase, NagA | 99.67 | |
| d1onwa1 | 105 | Isoaspartyl dipeptidase {Escherichia coli [TaxId: | 99.57 | |
| d2r8ca1 | 102 | Uncharacterized protein EAJ56179 {Unidentified org | 99.53 | |
| d1ejxc1 | 181 | alpha-Subunit of urease {Klebsiella aerogenes [Tax | 99.45 | |
| d2qs8a1 | 96 | Xaa-Pro dipeptidase {Alteromonas macleodii [TaxId: | 99.45 | |
| d2fvka1 | 156 | Dihydropyrimidine amidohydrolase Pyd2 {Yeast (Sacc | 99.43 | |
| d1nfga1 | 127 | D-hydantoinase {Burkholderia pickettii [TaxId: 329 | 99.43 | |
| d1ynya1 | 127 | D-hydantoinase {Bacillus sp. AR9 [TaxId: 301298]} | 99.41 | |
| d1k1da1 | 128 | D-hydantoinase {Bacillus stearothermophilus [TaxId | 99.33 | |
| d1gkra1 | 126 | L-hydantoinase {Arthrobacter aurescens [TaxId: 436 | 99.29 | |
| d2vhla1 | 91 | N-acetylglucosamine-6-phosphate deacetylase, NagA | 99.29 | |
| d1ra0a2 | 320 | Cytosine deaminase catalytic domain {Escherichia c | 99.27 | |
| d1gkpa1 | 123 | D-hydantoinase {Thermus sp. [TaxId: 275]} | 99.23 | |
| d1m7ja1 | 55 | N-acyl-D-aminoacid amidohydrolase {Alcaligenes fae | 99.16 | |
| d1kcxa1 | 142 | Dihydropyrimidinase related protein-1 {Mouse (Mus | 99.04 | |
| d2bb0a2 | 300 | Imidazolonepropionase {Bacillus subtilis [TaxId: 1 | 99.02 | |
| d2ftwa1 | 150 | Dihydropyrimidine amidohydrolase Pyd2 {Dictyosteli | 98.87 | |
| d2q09a2 | 301 | Probable 4-imidazolone-5-propanoate amidohydrolase | 98.83 | |
| d2puza2 | 301 | Imidazolonepropionase {Agrobacterium tumefaciens [ | 98.75 | |
| d2p9ba2 | 324 | Uncharacterized protein BL1453 {Bifidobacterium lo | 98.67 | |
| d1xrta1 | 112 | Two-domain dihydroorotase {Aquifex aeolicus [TaxId | 98.66 | |
| d1e9yb1 | 180 | alpha-Subunit of urease {Helicobacter pylori [TaxI | 98.58 | |
| d4ubpc1 | 180 | alpha-Subunit of urease {Bacillus pasteurii [TaxId | 98.51 | |
| d2puza1 | 103 | Imidazolonepropionase {Agrobacterium tumefaciens [ | 98.5 | |
| d3be7a2 | 303 | Zn-dependent arginine carboxypeptidase {Unidentifi | 98.35 | |
| d1i0da_ | 331 | Phosphotriesterase (parathion hydrolase, PTE) {Pse | 98.26 | |
| d1bf6a_ | 291 | Phosphotriesterase homology protein {Escherichia c | 98.25 | |
| d1kcxa2 | 334 | Dihydropyrimidinase related protein-1 {Mouse (Mus | 98.16 | |
| d2amxa1 | 357 | Adenosine deaminase (ADA) {Plasmodium yoelii [TaxI | 98.06 | |
| d2ftwa2 | 334 | Dihydropyrimidine amidohydrolase Pyd2 {Dictyosteli | 98.03 | |
| d2qs8a2 | 310 | Xaa-Pro dipeptidase {Alteromonas macleodii [TaxId: | 98.0 | |
| d2icsa2 | 267 | Putative adenine deaminase EF0837 {Enterococcus fa | 97.94 | |
| d1ynya2 | 332 | D-hydantoinase {Bacillus sp. AR9 [TaxId: 301298]} | 97.79 | |
| d2r8ca2 | 311 | Uncharacterized protein EAJ56179 {Unidentified org | 97.76 | |
| d1m7ja3 | 358 | N-acyl-D-aminoacid amidohydrolase, catalytic domai | 97.72 | |
| d2q09a1 | 103 | Probable 4-imidazolone-5-propanoate amidohydrolase | 97.56 | |
| d4ubpc2 | 390 | alpha-subunit of urease, catalytic domain {Bacillu | 97.56 | |
| d1nfga2 | 330 | D-hydantoinase {Burkholderia pickettii [TaxId: 329 | 97.5 | |
| d1gkpa2 | 335 | D-hydantoinase {Thermus sp. [TaxId: 275]} | 97.42 | |
| d2fvka2 | 384 | Dihydropyrimidine amidohydrolase Pyd2 {Yeast (Sacc | 97.42 | |
| d1ejxc2 | 385 | alpha-subunit of urease, catalytic domain {Klebsie | 97.29 | |
| d1e9yb2 | 389 | alpha-subunit of urease, catalytic domain {Helicob | 97.28 | |
| d1a4ma_ | 349 | Adenosine deaminase (ADA) {Mouse (Mus musculus) [T | 97.23 | |
| d1zzma1 | 259 | Putative deoxyribonuclease YjjV {Escherichia coli | 97.2 | |
| d1o12a1 | 76 | N-acetylglucosamine-6-phosphate deacetylase, NagA | 97.09 | |
| d1gkra2 | 325 | L-hydantoinase {Arthrobacter aurescens [TaxId: 436 | 96.93 | |
| d1j6oa_ | 260 | Hypothetical protein TM0667 {Thermotoga maritima [ | 96.89 | |
| d1yrra2 | 297 | N-acetylglucosamine-6-phosphate deacetylase, NagA, | 96.88 | |
| d1xrta2 | 310 | Two-domain dihydroorotase {Aquifex aeolicus [TaxId | 96.88 | |
| d1onwa2 | 284 | Isoaspartyl dipeptidase, catalytic domain {Escheri | 96.67 | |
| d1yixa1 | 265 | Putative deoxyribonuclease YcfH {Escherichia coli | 96.33 | |
| d1xwya1 | 260 | Deoxyribonuclease TatD (MttC) {Escherichia coli [T | 96.26 | |
| d1ra0a1 | 103 | Cytosine deaminase {Escherichia coli [TaxId: 562]} | 96.05 | |
| d2ooda1 | 140 | Guanine deaminase {Bradyrhizobium japonicum [TaxId | 95.97 | |
| d2vhla2 | 301 | N-acetylglucosamine-6-phosphate deacetylase, NagA, | 95.79 | |
| d2icsa1 | 101 | Putative adenine deaminase EF0837 {Enterococcus fa | 95.5 | |
| d1o12a2 | 288 | N-acetylglucosamine-6-phosphate deacetylase, NagA, | 94.8 | |
| d3be7a1 | 95 | Zn-dependent arginine carboxypeptidase {Unidentifi | 87.59 | |
| d2dvta1 | 325 | Thermophilic reversible gamma-resorcylate decarbox | 85.47 | |
| d2gwga1 | 342 | 4-oxalomesaconate hydratase LigJ {Rhodopseudomonas | 82.57 |
| >d2i9ua2 c.1.9.9 (A:67-376) Guanine deaminase {Clostridium acetobutylicum [TaxId: 1488]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: Metallo-dependent hydrolases family: SAH/MTA deaminase-like domain: Guanine deaminase species: Clostridium acetobutylicum [TaxId: 1488]
Probab=99.97 E-value=3e-31 Score=230.19 Aligned_cols=219 Identities=21% Similarity=0.280 Sum_probs=186.7
Q ss_pred ccccccCccchhhhhhcccCCCCccccccccccCccCCCChHH-HHHHHHHHHHHHHhcCcceeecCCCCC---HHHHHH
Q 022028 80 PGFVNTHVHTSQQLAKGIADDVDLMTWLHDRIWPYESNMTEED-SYISTLLCGIELIHSGVTCFAEAGGQH---VSEMAK 155 (304)
Q Consensus 80 PG~ID~H~Hl~~s~~~g~~~~~~~~~~l~~~~~~~~~~~~~e~-~~~~~~~~~~~~l~~GvTtv~d~~~~~---~~~~~~ 155 (304)
|||||+|+|++++.+||...+.++.+|+...+|+.+.++.+++ .+..++.++.+++++||||+.++...+ .....+
T Consensus 1 PG~vdaH~H~~~~~~rg~~~~~~l~~wl~~~~~p~~~~~~~~d~~~~~~~~~~~e~l~~GtTtv~d~~~~~~~~~~~~~~ 80 (310)
T d2i9ua2 1 PGMNDLHAHASQYKNLGIGMDKELLPWLNNYTFPEEAKFLNVDYAKKTYGRLIKDLIKNGTTRVALFATLHKDSTIELFN 80 (310)
T ss_dssp ECEEEEEEEGGGGGGTTCCCSSCHHHHHHHTHHHHHHGGGSHHHHHHHHHHHHHHHHHTTEEEEEEECCSCHHHHHHHHH
T ss_pred CCCEehhhChhhhhhhhccCCCCHHHHHHHhHHHHHHhcCCHHHHHHHHHHHHHHHHHcCCcceeeeeccchhhhHHHHH
Confidence 9999999999999999999999999999999988876665555 455677788999999999999887544 346778
Q ss_pred HHHHcCCeEEeecccccCCCCCCCCcccCChHHHHHHHHHHHHHHcCCCCCCeEEEEeeCcccCCCHHHHHHHHHHHHHh
Q 022028 156 AVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREF 235 (304)
Q Consensus 156 ~~~~~gir~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~e~l~~~~~~a~~~ 235 (304)
++.+.|+|.+++...++.+.. .+........+++.++..+++... .+.+.+.++|++++.++++.++.+.++++++
T Consensus 81 a~~~~gir~~~~~~~~~~~~~---~~~~~~~~~~l~~~~~~~~~~~~~-~~~i~~~~~~~~~~~~~~e~~~~~~~~a~~~ 156 (310)
T d2i9ua2 81 MLIKSGIGAYVGKVNMDYNCP---DYLTENYITSLNDTEEIILKYKDK-SNIVKPIITPRFVPSCSNELMDGLGKLSYKY 156 (310)
T ss_dssp HHHHHTCEEEEECEECCSSCC---TTSCCCHHHHHHHHHHHHHHHTTT-CSSEEECBEECCGGGCCHHHHHHHHHHHHHH
T ss_pred HHHHhCccccccceeccCCcc---ccchhhHHHHHHHHHHHHHHhhcc-ccccceeecccCCCccCHHHHHHHHHHhhcc
Confidence 889999999999888775432 222334567777788888887763 4678888999999999999999999999999
Q ss_pred CCeeeEEecCChhhHHHHHHhcCCCCCHHHHHHHhCCCCC-CeeEEEeccCCcchhc-----------ccccccccccc
Q 022028 236 KTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQN-NLLSAHTVWVNHTEVN-----------CTFGNFKYAVH 302 (304)
Q Consensus 236 ~~~~~~H~~E~~~~~~~~~~~~g~~~~~~~~l~~~g~l~~-~~~~~H~~~l~~~di~-----------~p~sN~~l~~~ 302 (304)
++++++|++|+..+.+.+++.+|.+..+.+++.+.|++++ +++++||++++++|++ ||.||++|++.
T Consensus 157 ~~~~~~H~~E~~~e~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~H~~~~~~~~i~~la~~g~~vv~cP~sn~~l~~g 235 (310)
T d2i9ua2 157 RLPVQSHLSENLDEIAVVKSLHKKSNFYGEVYDKFGLFGNTPTLMAHCIHSSKEEINLIKRNNVTIVHCPTSNFNLGSG 235 (310)
T ss_dssp TCCEEEEESCCHHHHHHHHHHCTTCSSHHHHHHHTTCSSSSCEEEEECCSCCHHHHHHHHHTTCEEEECHHHHHHTTCC
T ss_pred ccceeehhccchHHHHHHHHHhcccccHHHHHHhcCCccCCceeeeeeeeechhHHHHHHhcCCEEEEeecccccccCC
Confidence 9999999999999999999999987678899999999975 5889999999999998 99999999863
|
| >d1p1ma2 c.1.9.9 (A:50-330) Hypothetical protein TM0936, probable catalytic domain {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: Metallo-dependent hydrolases family: SAH/MTA deaminase-like domain: Hypothetical protein TM0936, probable catalytic domain species: Thermotoga maritima [TaxId: 2336]
Probab=99.97 E-value=9.4e-32 Score=230.30 Aligned_cols=200 Identities=25% Similarity=0.392 Sum_probs=176.3
Q ss_pred cccccCccchhhhhhcccCCCCccccccccccCccCCCChHHHHHHHHHHHHHHHhcCcceeecCCCCCHHHHHHHHHHc
Q 022028 81 GFVNTHVHTSQQLAKGIADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQHVSEMAKAVELL 160 (304)
Q Consensus 81 G~ID~H~Hl~~s~~~g~~~~~~~~~~l~~~~~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~ 160 (304)
||||+|+|+.++.+||...+.++.+|+.+.+|+.+.+++++++|..++.++.+++++||||+.|+. .+.+...+++++.
T Consensus 1 GLVnaH~Hl~~~~~rg~~~~~~l~~wl~~~~~~~~~~~t~e~~~~~~~~~~~e~l~~G~Ttv~d~~-~~~~~~~~a~~~~ 79 (281)
T d1p1ma2 1 ALFNTHTHAPMTLLRGVAEDLSFEEWLFSKVLPIEDRLTEKMAYYGTILAQMEMARHGIAGFVDMY-FHEEWIAKAVRDF 79 (281)
T ss_dssp CEEEEEECGGGGGGTTSSCSCCHHHHHHTTHHHHHTTCCHHHHHHHHHHHHHHHHTTTEEEEEEEE-SSHHHHHHHHHHH
T ss_pred CcEehhhCHhHHHHHhccCCCCHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHhhCCeEEEeeec-cCcHHHHHHHHHh
Confidence 899999999999999999999999999999999999999999999999999999999999999987 5678889999999
Q ss_pred CCeEEeecccccCCCCCCCCcccCChHHHHHHHHHHHHHHcCCCCCCeEEEEeeCcccCCCHHHHHHHHHHHHHhCCeee
Q 022028 161 GLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIH 240 (304)
Q Consensus 161 gir~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~e~l~~~~~~a~~~~~~~~ 240 (304)
|+|.+++..+.+... +. ...+++..++++++.. .++++...++|++++++++++++.++++|++++++++
T Consensus 80 g~r~~~~~~~~~~~~----~~-----~~~~~e~~~~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~i~ 149 (281)
T d1p1ma2 80 GMRALLTRGLVDSNG----DD-----GGRLEENLKLYNEWNG-FEGRIFVGFGPHSPYLCSEEYLKRVFDTAKSLNAPVT 149 (281)
T ss_dssp CCEEEEEEEECCBTT----BC-----TTHHHHHHHHHHHHTT-GGGTEEEEEEECCTTTSCHHHHHHHHHHHHHTTCCEE
T ss_pred CCceEEeeeeeecCc----cc-----cccHHHHHHHHHHhcC-ccCceEEEEecccchhhhhhhhHHHHHHHhccCcccc
Confidence 999999888776431 11 1334566677777754 3468899999999999999999999999999999999
Q ss_pred EEecCChhhHHHHHHhcCCCCCHHHHHHHhCCCCCCeeEEEeccCCcchhc-----------ccccccccccc
Q 022028 241 MHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEVN-----------CTFGNFKYAVH 302 (304)
Q Consensus 241 ~H~~E~~~~~~~~~~~~g~~~~~~~~l~~~g~l~~~~~~~H~~~l~~~di~-----------~p~sN~~l~~~ 302 (304)
+|++|+..++ .+++++.+.|+|+++++++||++++++|++ ||.||++++..
T Consensus 150 iH~~e~~~e~-----------~~~~~l~~~g~l~~~~~~~H~~~~~~~di~~la~~~~~vv~cP~sn~~lg~~ 211 (281)
T d1p1ma2 150 IHLYETSKEE-----------YDLEDILNIGLKEVKTIAAHCVHLPERYFGVLKDIPFFVSHNPASNLKLGNG 211 (281)
T ss_dssp EEESCSTTCC-----------CCTHHHHTTTTTTSCEEEEECTTCCGGGTTTTTTSSEEEEECHHHHHHTTCC
T ss_pred ccccCCcccc-----------hhHHHHHHcCCCCccccccceeeecHHHHHHHHhcCCccccccchhhhhccc
Confidence 9999987652 378999999999999999999999999998 99999999854
|
| >d2uz9a2 c.1.9.9 (A:76-388) Guanine deaminase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: Metallo-dependent hydrolases family: SAH/MTA deaminase-like domain: Guanine deaminase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.96 E-value=5.4e-29 Score=216.11 Aligned_cols=221 Identities=22% Similarity=0.311 Sum_probs=187.2
Q ss_pred ccccccCccchhhhhhcccCCCCccccccccccCccCCCChHH-HHHHHHHHHHHHHhcCcceeecCCCCCH---HHHHH
Q 022028 80 PGFVNTHVHTSQQLAKGIADDVDLMTWLHDRIWPYESNMTEED-SYISTLLCGIELIHSGVTCFAEAGGQHV---SEMAK 155 (304)
Q Consensus 80 PG~ID~H~Hl~~s~~~g~~~~~~~~~~l~~~~~~~~~~~~~e~-~~~~~~~~~~~~l~~GvTtv~d~~~~~~---~~~~~ 155 (304)
|||||+|+|++++.+||...+.++.+|+.+.+|+.+..+++++ .+..+..++.+++++|+|++.++..... ....+
T Consensus 1 PGfIdaH~Hl~~~~~~g~~~~~~l~~wl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~G~tt~~~~~~~~~~~~~~~~~ 80 (313)
T d2uz9a2 1 PGLVDTHIHASQYSFAGSSIDLPLLEWLTKYTFPAEHRFQNIDFAEEVYTRVVRRTLKNGTTTACYFATIHTDSSLLLAD 80 (313)
T ss_dssp ECEEEEEEEGGGGGGTTSCCCSCHHHHHHHTHHHHHHGGGSHHHHHHHHHHHHHHHHHTTEEEEEEECCSCHHHHHHHHH
T ss_pred CCCCcHhhChhhhhhhhccCCCCHHHHHHHhHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCeEeeecccccccchhHHHH
Confidence 9999999999999999998899999999988887776665544 5667778899999999999998775433 34567
Q ss_pred HHHHcCCeEEeecccccCCCCCCCCcccCChHHHHHHHHHHHHHHcCCCCCCeEEEEeeCcccCCCHHHHHHHHHHHHHh
Q 022028 156 AVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREF 235 (304)
Q Consensus 156 ~~~~~gir~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~e~l~~~~~~a~~~ 235 (304)
++.+.|+|.+.+..+.+.....+ . .....+..++..+++++.+.....+++++.++++.++.++++.++++.++|+++
T Consensus 81 a~~~~g~r~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~e~l~~~~~~a~~~ 158 (313)
T d2uz9a2 81 ITDKFGQRAFVGKVCMDLNDTFP-E-YKETTEESIKETERFVSEMLQKNYSRVKPIVTPRFSLSCSETLMGELGNIAKTR 158 (313)
T ss_dssp HHHHHTCEEEEECEECSCCSSST-T-SCCCHHHHHHHHHHHHHHHHHHTCSSEEEEEEECCGGGCCHHHHHHHHHHHHHH
T ss_pred HHHHhCCcccccceeccCCcccc-h-hhhhHHHHHHHHHHHHHHhhcccccceeEEEeccccccccHHHHHHHHHHhhcc
Confidence 78889999998887766443222 2 223566778888899988877778899999999999999999999999999999
Q ss_pred CCeeeEEecCChhhHHHHHHhcCCCCCHHHHHHHhCCCCCCeeEEEeccCCcchhc-----------ccccccccccc
Q 022028 236 KTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEVN-----------CTFGNFKYAVH 302 (304)
Q Consensus 236 ~~~~~~H~~E~~~~~~~~~~~~g~~~~~~~~l~~~g~l~~~~~~~H~~~l~~~di~-----------~p~sN~~l~~~ 302 (304)
++++++|+.|+..+...++.......++++++.+.|+|++++.++||++++++|++ ||.+|.+++..
T Consensus 159 g~~~~~H~~e~~~e~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~H~~~l~~~e~~~l~~~g~~~~~~P~~~~~~~~~ 236 (313)
T d2uz9a2 159 DLHIQSHISENRDEVEAVKNLYPSYKNYTSVYDKNNLLTNKTVMAHGCYLSAEELNVFHERGASIAHCPNSNLSLSSG 236 (313)
T ss_dssp TCEEEEEESCSHHHHHHHHHHSTTSSSHHHHHHHTTCCSTTEEEEECTTCCHHHHHHHHHHTCEEEECHHHHHHTTCC
T ss_pred ccceeeehhcchhHHHHHHHhhcccCChHHHHHHcCCcCCcceEEeeeecchhHHHHHhhhcccccccchhhhhcccc
Confidence 99999999999999998887665555699999999999999999999999999998 99999988754
|
| >d2paja2 c.1.9.9 (A:70-405) Hypothetical protein GOS_1943094 {Environmental samples} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: Metallo-dependent hydrolases family: SAH/MTA deaminase-like domain: Hypothetical protein GOS 1943094 species: Environmental samples
Probab=99.91 E-value=7e-24 Score=184.75 Aligned_cols=221 Identities=24% Similarity=0.301 Sum_probs=149.3
Q ss_pred ccccccCccchhhhhhccc--CCCCccccccccccCccCCCChHHHHHHHHHHHHHHHhcCcceeecCCCC--------C
Q 022028 80 PGFVNTHVHTSQQLAKGIA--DDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQ--------H 149 (304)
Q Consensus 80 PG~ID~H~Hl~~s~~~g~~--~~~~~~~~l~~~~~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~d~~~~--------~ 149 (304)
|||||+|+|+.++.+||.. .+.+|.+|+.+.+++.+..+++++++..++.++.+++++||||++|++.. .
T Consensus 1 PGlInaH~Hl~~s~~rg~~~~~~~~l~~wl~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~GvTtv~d~~~~~~~~~~~~~ 80 (336)
T d2paja2 1 PAWVNTHHHLFQSLLKGEPAGLDATLTPWLAATPYRFRALFDERRFRLAARIGLIELARSGCATVADHNYVYYPGMPFDS 80 (336)
T ss_dssp ECEECCCCCGGGGGCCSCC-----------------CGGGCCHHHHHHHHHHHHHHHHTTTEEEEEECCCCCCTTCSSCH
T ss_pred CCCEehhhChhhhccccccccCCCCHHHHHHHhHHHHHHhCCHHHHHHHHHHHHHHHHhCCCeEEEecccccccccchhH
Confidence 9999999999999999864 46789999999888998899999999999999999999999999997532 1
Q ss_pred HHHHHHHHHHcCCeEEeecccccCCCCCCC----CcccCChHHHHHHHHHHHHHHcCCCCC--CeEEEEeeCcccCCCHH
Q 022028 150 VSEMAKAVELLGLRACLVQSTMDCGEGLPA----SWAVRTTDDCIQSQKELYAKHHHAADG--RIRIWFGIRQIMNATDR 223 (304)
Q Consensus 150 ~~~~~~~~~~~gir~~~~~~~~d~g~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~--~i~~~~~~~~~~~~~~e 223 (304)
.....+++.+.|+|.+.+....+....... ................+.+........ ............+++++
T Consensus 81 ~~~~~~~~~~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (336)
T d2paja2 81 SAILFEEAEKLGLRFVLLRGGATQTRQLEADLPTALRPETLDAYVADIERLAARYHDASPRAMRRVVMAPTTVLYSISPR 160 (336)
T ss_dssp HHHHHHHHHHTTCEEEEEECCCSCCCSCSTTSCGGGCCCCHHHHHHHHHHHHHHTCCCSTTCSEEEEECCTTTTTSSCHH
T ss_pred HHHHHHHHHHhCceeEeecceeccCcccccccchhhhhhhHHHHHHHHHHHHHHhhhhcccccceeeecccccCcccCHH
Confidence 345678899999999887766553321111 111223334444555566555443332 23344445566788999
Q ss_pred HHHHHHHHHHHhCCeeeEEecCChhhHHHHHHhcCCCCCHHHHHHHhCCCCCCeeEEEeccCCcchhc-----------c
Q 022028 224 LLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEVN-----------C 292 (304)
Q Consensus 224 ~l~~~~~~a~~~~~~~~~H~~E~~~~~~~~~~~~g~~~~~~~~l~~~g~l~~~~~~~H~~~l~~~di~-----------~ 292 (304)
.++...+.+++.+.++++|+.+...+...+.+.+|.. +++++...+++++.+...||+++++++++ |
T Consensus 161 ~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~l~~~~~~~~~~ 238 (336)
T d2paja2 161 EMRETAAVARRLGLRMHSHLSETVGYQDSAYSMYGKS--PVAFCGEHDWLGSDVWYAHLVKVDADEIALLAQTGTGVAHC 238 (336)
T ss_dssp HHHHHHHHHHHTTCEEEEECC-------------CCC--HHHHHHHTTCCSTTEEEESCCSCCHHHHHHHHHHTCEEEEC
T ss_pred HHHHHHhhhhccCCceeeeccccchhhHHHHHhcCCc--cccccccccccccccccccceecchHHHHHHhhccccceec
Confidence 9999999999999999999999999999999999985 99999999999999999999999999986 9
Q ss_pred cccccccccc
Q 022028 293 TFGNFKYAVH 302 (304)
Q Consensus 293 p~sN~~l~~~ 302 (304)
|.+|.+++..
T Consensus 239 p~~~~~~~~~ 248 (336)
T d2paja2 239 PQSNGRLGSG 248 (336)
T ss_dssp HHHHHCC---
T ss_pred cchhhccCcc
Confidence 9999998864
|
| >d2imra2 c.1.9.16 (A:91-398) Hypothetical protein DR0824 {Deinococcus radiodurans [TaxId: 1299]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: Metallo-dependent hydrolases family: DR0824-like domain: Hypothetical protein DR0824 species: Deinococcus radiodurans [TaxId: 1299]
Probab=99.86 E-value=1.2e-21 Score=168.01 Aligned_cols=208 Identities=16% Similarity=0.176 Sum_probs=169.3
Q ss_pred ccccccCccchhhhhhcccCCCCccccccccccCccCCCChHHHHHHHHHHHHHHHhcCcceeecCCCCCHHHHHHHHHH
Q 022028 80 PGFVNTHVHTSQQLAKGIADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQHVSEMAKAVEL 159 (304)
Q Consensus 80 PG~ID~H~Hl~~s~~~g~~~~~~~~~~l~~~~~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~d~~~~~~~~~~~~~~~ 159 (304)
|||||+|+|+.++.+++.. .++.+|+.+.++.... . +.+..++.++.+++++|+||+.|+. .....+.+++.+
T Consensus 1 PGlIdaH~Hl~~s~~~~~~--~~~~~~l~~~~~~~~~-~---~~~~~a~~~~~~~l~~G~Ttv~d~~-~~~~~~~~~~~~ 73 (308)
T d2imra2 1 PPPVNAHTHLDMSAYEFQA--LPYFQWIPEVVIRGRH-L---RGVAAAQAGADTLTRLGAGGVGDIV-WAPEVMDALLAR 73 (308)
T ss_dssp SCCCEEEEESSCCHHHHHH--CHHHHTSHHHHHHHTT-C---CHHHHHHHHHHHHHHTTCCCEEEEE-CSHHHHHHHHTC
T ss_pred CCccchhhChhhhCccccC--CCHHHHHHHHHhcccc-c---cHHHHHHHHHHHHHHcCCeEEEehh-cCHHHHHHHHHH
Confidence 9999999999998887753 4677888765543322 2 2345678889999999999999987 456667778888
Q ss_pred cCCeEEeecccccCCCCCCCCcccCChHHHHHHHHHHHHHHcCCCCCCeEEEEeeCcccCCCHHHHHHHHHHHHHhCCee
Q 022028 160 LGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGI 239 (304)
Q Consensus 160 ~gir~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~e~l~~~~~~a~~~~~~~ 239 (304)
.++|...+....... ....++.++...+.++.+.....+.+++.+.++..+.++++..+....++++.+.++
T Consensus 74 ~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (308)
T d2imra2 74 EDLSGTLYFEVLNPF--------PDKADEVFAAARTHLERWRRLERPGLRLGLSPHTPFTVSHRLMRLLSDYAAGEGLPL 145 (308)
T ss_dssp TTCCEEEEEEECBCC--------GGGHHHHHHHHHHHHHHHHTTCBTTEEEEEEECCSSSBCHHHHHHHHHHHHHHTCCB
T ss_pred hCcCeEEEeeecCCC--------CCCHHHHHHHHHHHHHHHhccCCCceEEeeecccccccchHHHHHHhhhccccCccc
Confidence 999988776554321 113456677788888988887778899999999999999999999999999999999
Q ss_pred eEEecCChhhHHHHHHhcCC------------------------CCCHHHHHHHhCCCCCCeeEEEeccCCcchhc----
Q 022028 240 HMHVAEIPYENQVVMDTRKV------------------------DHGTVTFLDKIEFLQNNLLSAHTVWVNHTEVN---- 291 (304)
Q Consensus 240 ~~H~~E~~~~~~~~~~~~g~------------------------~~~~~~~l~~~g~l~~~~~~~H~~~l~~~di~---- 291 (304)
++|..++..+.....+.++. ..++++++++.|+|+++++++|+++++++++.
T Consensus 146 ~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~g~l~~~~~~~h~~~~~~~~~~~~~~ 225 (308)
T d2imra2 146 QIHVAEHPTELEMFRTGGGPLWDNRMPALYPHTLAEVIGREPGPDLTPVRYLDELGVLAARPTLVHMVNVTPDDIARVAR 225 (308)
T ss_dssp EEEESCSHHHHHHHHHSCSTTGGGSCGGGSCSSHHHHHTSCCCTTCCHHHHHHHHTCGGGCCEEEECCSCCHHHHHHHHH
T ss_pred eeeeecccchhhhhhhhccchhhhhhhhhhHHHhhhhhhcccccCCCHHHHHHHCCCCCCCeeeeecccchhhhhhhhhh
Confidence 99999999999888886642 13589999999999999999999999999887
Q ss_pred -------ccccccccccc
Q 022028 292 -------CTFGNFKYAVH 302 (304)
Q Consensus 292 -------~p~sN~~l~~~ 302 (304)
||.+|..++.+
T Consensus 226 ~g~~~~~~p~~~~~~~~~ 243 (308)
T d2imra2 226 AGCAVVTCPRSNHHLECG 243 (308)
T ss_dssp HTCCEEECHHHHHHTTCC
T ss_pred cCCccccccccccccccc
Confidence 99999887765
|
| >d2ooda2 c.1.9.9 (A:73-397) Guanine deaminase {Bradyrhizobium japonicum [TaxId: 375]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: Metallo-dependent hydrolases family: SAH/MTA deaminase-like domain: Guanine deaminase species: Bradyrhizobium japonicum [TaxId: 375]
Probab=99.78 E-value=2.9e-18 Score=147.11 Aligned_cols=206 Identities=19% Similarity=0.275 Sum_probs=157.5
Q ss_pred ccccccCccchhhhhhcccCCCCccccccccccCccCCCChHH-HHHHHHHHHHHHHhcCcceeecCCCCCH---HHHHH
Q 022028 80 PGFVNTHVHTSQQLAKGIADDVDLMTWLHDRIWPYESNMTEED-SYISTLLCGIELIHSGVTCFAEAGGQHV---SEMAK 155 (304)
Q Consensus 80 PG~ID~H~Hl~~s~~~g~~~~~~~~~~l~~~~~~~~~~~~~e~-~~~~~~~~~~~~l~~GvTtv~d~~~~~~---~~~~~ 155 (304)
|||||+|+|+.++..+|.. +.++.+|+...+|+.+.++.+++ .+..+..++.+++.+||||++|+..... ....+
T Consensus 1 PGlID~H~Hl~~~~~~g~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~G~Tt~~d~~~~~~~~~~~~~~ 79 (325)
T d2ooda2 1 PGFIDGHIHLPQTRVLGAY-GEQLLPWLQKSIYPEEIKYKDRNYAREGVKRFLDALLAAGTTTCQAFTSSSPVATEELFE 79 (325)
T ss_dssp ECEEEEEEEGGGTTCTTCC-SCCHHHHHHHHTHHHHGGGGSHHHHHHHHHHHHHHHHHTTEEEEEEECCSSHHHHHHHHH
T ss_pred CCCcchhhCccccccccCC-CCcHHHHHHHhhHHHHHhcCCHHHHHHHHHHHHHHHHhCCeEEEeeccccCchhhHHHHH
Confidence 9999999999999988865 56899999988888777766655 4556777899999999999999875432 34566
Q ss_pred HHHHcCCeEEeecccccCCCCCCCCcccCChHHHHHHHHHHHHHHcCCCCCCeEEEEeeCcccCCCHHHHHHHHHHHH-H
Q 022028 156 AVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAR-E 234 (304)
Q Consensus 156 ~~~~~gir~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~e~l~~~~~~a~-~ 234 (304)
++...+.+...+....+.. .+.......+..++...+..+..... ..+.....+.....++++......+.++ .
T Consensus 80 ~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (325)
T d2ooda2 80 EASRRNMRVIAGLTGIDRN---APAEFIDTPENFYRDSKRLIAQYHDK--GRNLYAITPRFAFGASPELLKACQRLKHEH 154 (325)
T ss_dssp HHHHHTCCEEECCEECCSS---SCTTTCCCHHHHHHHHHHHHHHHTTB--TTEEEEEEECBGGGCCHHHHHHHHHHHHHC
T ss_pred HHHhhcccceeeeeccCCC---CCcccccCHHHHHHHHHHHHHhhccc--cceeeeeecccccccCHHHHHHHHhhHhhc
Confidence 7788888888777665532 12222334566666666666555432 4456667777777788887666655555 4
Q ss_pred hCCeeeEEecCChhhHHHHHHhcCCCCCHHHHHHHhCCCCCCeeEEEeccCCcchhc
Q 022028 235 FKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEVN 291 (304)
Q Consensus 235 ~~~~~~~H~~E~~~~~~~~~~~~g~~~~~~~~l~~~g~l~~~~~~~H~~~l~~~di~ 291 (304)
.+..++.|+.|+..+...+.+..+.....++++...+.++++.+..|+++++++++.
T Consensus 155 ~~~~~~~~~~e~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 211 (325)
T d2ooda2 155 PDCWVNTHISENPAECSGVLVEHPDCQDYLGVYEKFDLVGPKFSGGHGVYLSNNEFR 211 (325)
T ss_dssp TTSEEEEECSCCHHHHHHHHHHCTTCSSHHHHHHTTTCCSTTEEEECCTTCCHHHHH
T ss_pred cCCceeeehhccHHHHHHHHHhcccCcchHHHHHhcCcccCceeeeeeeeechhhhh
Confidence 789999999999999999999887665689999999999999999999999998887
|
| >d2p9ba1 b.92.1.10 (A:9-70,A:395-450) Uncharacterized protein BL1453 {Bifidobacterium longum [TaxId: 216816]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Composite domain of metallo-dependent hydrolases superfamily: Composite domain of metallo-dependent hydrolases family: Imidazolonepropionase-like domain: Uncharacterized protein BL1453 species: Bifidobacterium longum [TaxId: 216816]
Probab=99.72 E-value=4.9e-18 Score=123.03 Aligned_cols=72 Identities=21% Similarity=0.210 Sum_probs=61.3
Q ss_pred cccEEEEccEEEecCCCCceeeeeeEEEe-CCEEEEecCChhhhhhhcCCCceEEeCCCCEeeccccccCccchhh
Q 022028 18 SSTMILHNAVIVTMDKESRVFRNGGVFVV-QDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQ 92 (304)
Q Consensus 18 ~~~~li~~~~ii~~~~~~~~~~~~~I~I~-~g~I~~i~~~~~~~~~~~~~~~~vID~~g~iv~PG~ID~H~Hl~~s 92 (304)
+..++|+|++|+++++..+++++++|+|+ ||||.+|++..+.+. +.+.++||++|++|+|||||+|+|+...
T Consensus 3 ~~p~ai~na~iit~d~~~~v~~~~~ilI~~dG~I~~vg~~~~~~~---~~~~~viD~~Gk~v~PGlid~H~Hl~~~ 75 (118)
T d2p9ba1 3 VEPFALAHATIVTGDKAGTILRNMTIVVGADGRIEQVAPSIETSI---PAEYHYLDGTGKIVMLEVGKSADLLVLN 75 (118)
T ss_dssp CCCEEEEEEEEECCCTTCCEEEEEEEEECTTSBEEEEEEGGGCCC---CTTCEEEECTTCEEECCTTSBCCEEEES
T ss_pred CccEEEEeeEEEeCCCCCceeeeEEEEEecCCeEEEEcccccccc---cceeEEEeccCcEEEeeecceeEEEEec
Confidence 55689999999999887789999999996 799999998654321 2467999999999999999999999763
|
| >d1yrra1 b.92.1.5 (A:1-53,A:351-382) N-acetylglucosamine-6-phosphate deacetylase, NagA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Composite domain of metallo-dependent hydrolases superfamily: Composite domain of metallo-dependent hydrolases family: N-acetylglucosamine-6-phosphate deacetylase, NagA domain: N-acetylglucosamine-6-phosphate deacetylase, NagA species: Escherichia coli [TaxId: 562]
Probab=99.67 E-value=5.7e-17 Score=111.00 Aligned_cols=65 Identities=18% Similarity=0.224 Sum_probs=55.8
Q ss_pred EEEEccEEEecCCCCceeeeeeEEEeCCEEEEecCChhhhhhhcCCCceEEeCCCCEeeccccccCccchhhh
Q 022028 21 MILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQL 93 (304)
Q Consensus 21 ~li~~~~ii~~~~~~~~~~~~~I~I~~g~I~~i~~~~~~~~~~~~~~~~vID~~g~iv~PG~ID~H~Hl~~s~ 93 (304)
+.|+|++|++++ ++++++.|+|+||||.+|++..+. +.+.++||++|++|+|||||+|+|.....
T Consensus 2 ~al~n~rI~dg~---~~~~~~~i~i~~g~I~~Ig~~~~~-----p~~~~viDl~G~~l~PGlid~hvH~~~~~ 66 (85)
T d1yrra1 2 YALTQGRIFTGH---EFLDDHAVVIADGLIKSVCPVAEL-----PPEIEQRSLNGAILSPTLAAGKVANLTAF 66 (85)
T ss_dssp EEEESSEEECSS---CEESSEEEEEETTEEEEEEEGGGS-----CTTCCEEECTTCEEEESCCTTSBCCEEEE
T ss_pred eEEEeeEEECCC---CcEeccEEEEeccEEEEEcccccc-----cceeEEEecCCcEEEcccEecceeecccc
Confidence 578999999854 577899999999999999987653 24678999999999999999999987644
|
| >d1onwa1 b.92.1.7 (A:1-62,A:347-389) Isoaspartyl dipeptidase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Composite domain of metallo-dependent hydrolases superfamily: Composite domain of metallo-dependent hydrolases family: Isoaspartyl dipeptidase domain: Isoaspartyl dipeptidase species: Escherichia coli [TaxId: 562]
Probab=99.57 E-value=2.7e-15 Score=106.75 Aligned_cols=67 Identities=18% Similarity=0.147 Sum_probs=54.1
Q ss_pred cccEEEEccEEEecCCCCceeeeeeEEEeCCEEEEecCChhhhhhhcCCCceEEeCCCCEeeccccccCccchh
Q 022028 18 SSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQ 91 (304)
Q Consensus 18 ~~~~li~~~~ii~~~~~~~~~~~~~I~I~~g~I~~i~~~~~~~~~~~~~~~~vID~~g~iv~PG~ID~H~Hl~~ 91 (304)
+..++|+|++|++++ .....+|+|+||||++|++..+... ..+.++||++|++|+|||||+|.|...
T Consensus 7 ~~~llikna~i~~~~----~~~~~dI~I~~g~I~~I~~~~~~~~---~~~~~vID~~G~~v~PG~ID~H~h~~~ 73 (105)
T d1onwa1 7 AGFTLLQGAHLYAPE----DRGICDVLVANGKIIAVASNIPSDI---VPNCTVVDLSGQILCPEILPGNDADLL 73 (105)
T ss_dssp GCCEEEESCEEESSS----EEEECEEEEETTEEEEEETTCCTTS---SSSCEEEECTTCEEEESCCTTSBCCEE
T ss_pred CCCEEEECcEEEcCC----CCeeeeEEEECCEEEEeccCccccc---CCCCeEEcCCCCEEeCCEeecccCcce
Confidence 446889999999864 2357899999999999998654321 235689999999999999999999654
|
| >d2r8ca1 b.92.1.9 (A:2-57,A:369-414) Uncharacterized protein EAJ56179 {Unidentified organism [TaxId: 32644]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Composite domain of metallo-dependent hydrolases superfamily: Composite domain of metallo-dependent hydrolases family: Zn-dependent arginine carboxypeptidase-like domain: Uncharacterized protein EAJ56179 species: Unidentified organism [TaxId: 32644]
Probab=99.53 E-value=8.1e-15 Score=104.14 Aligned_cols=64 Identities=13% Similarity=0.310 Sum_probs=53.3
Q ss_pred ccEEEEccEEEecCCCCceeeeeeEEEeCCEEEEecCChhhhhhhcCCCceEEeCCCCEeeccccccCcc
Q 022028 19 STMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVH 88 (304)
Q Consensus 19 ~~~li~~~~ii~~~~~~~~~~~~~I~I~~g~I~~i~~~~~~~~~~~~~~~~vID~~g~iv~PG~ID~H~H 88 (304)
++++|+|++|+++.. ..++++.+|+|++|+|++|++.... +.+.++||++|++|+|||||.|.|
T Consensus 1 t~~l~~n~~v~d~~~-~~~~~~~~I~I~~g~I~~i~~~~~~-----~~~~~vID~~G~~v~PGlid~h~~ 64 (102)
T d2r8ca1 1 TTFLFRNGALLDPDH-PDLLQGFEILIEDGFIREVSDKPIK-----SSNAHVIDVKGKTIMPRIVPGAHA 64 (102)
T ss_dssp CEEEEEEEEECCTTS-SSCEEEEEEEEESSBEEEEESSCCC-----CSSCEEEECTTCEEEESCCTTSBC
T ss_pred CeEEEECeEEECCCC-CCcccCcEEEEECCEEEEccccCCC-----CCCCEEEeCCCCEEECceeeheee
Confidence 358999999998753 3567888999999999999976432 246799999999999999998875
|
| >d1ejxc1 b.92.1.1 (C:1002-1129,C:1423-1475) alpha-Subunit of urease {Klebsiella aerogenes [TaxId: 28451]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Composite domain of metallo-dependent hydrolases superfamily: Composite domain of metallo-dependent hydrolases family: alpha-Subunit of urease domain: alpha-Subunit of urease species: Klebsiella aerogenes [TaxId: 28451]
Probab=99.45 E-value=8.2e-14 Score=105.64 Aligned_cols=81 Identities=22% Similarity=0.230 Sum_probs=60.5
Q ss_pred CCCCCCCCCCCcccEEEEccEEEecCCCCceeeeeeEEEeCCEEEEecCChhhhhh-----hcCCCceEEeCCCCEeecc
Q 022028 7 GGGSSSGSLGSSSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQ-----FSQMADQIIDLQSQILLPG 81 (304)
Q Consensus 7 ~~~~~~~~~~~~~~~li~~~~ii~~~~~~~~~~~~~I~I~~g~I~~i~~~~~~~~~-----~~~~~~~vID~~g~iv~PG 81 (304)
|+++++.......+++|+|+.|++.. .+ ..++|.|+||||++|++..++..+ ....+.++||++|++|+||
T Consensus 53 gmg~~~~~~~~~lDlvI~n~~Ivd~~---Gi-~kaDIgIkdGrI~~IGkagnpd~~d~v~l~~g~~tevIdaeG~ivtpG 128 (181)
T d1ejxc1 53 GMGQGQMLAADCVDLVLTNALIVDHW---GI-VKADIGVKDGRIFAIGKAGNPDIQPNVTIPIGAATEVIAAEGKIVTAG 128 (181)
T ss_dssp TTTBCCCCGGGSCSEEEEEEEEEETT---EE-EEEEEEEETTEEEEEECEECTTTCSSCCEECCTTCEEEECTTCEEEEC
T ss_pred CCCcCcccccccccEEEEccEEcCCC---Cc-EEEEEEEeCCEEEEEecCCCccccCCceeeeccceEEecCCCcEEeee
Confidence 44444333334557999999999954 44 578999999999999986543210 0123679999999999999
Q ss_pred ccccCccchh
Q 022028 82 FVNTHVHTSQ 91 (304)
Q Consensus 82 ~ID~H~Hl~~ 91 (304)
+||+|+|+..
T Consensus 129 ~ID~HvHf~~ 138 (181)
T d1ejxc1 129 SIEVGKLADL 138 (181)
T ss_dssp SSCTTSBCCE
T ss_pred eeecceEEee
Confidence 9999999965
|
| >d2qs8a1 b.92.1.9 (A:7-63,A:374-412) Xaa-Pro dipeptidase {Alteromonas macleodii [TaxId: 28108]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Composite domain of metallo-dependent hydrolases superfamily: Composite domain of metallo-dependent hydrolases family: Zn-dependent arginine carboxypeptidase-like domain: Xaa-Pro dipeptidase species: Alteromonas macleodii [TaxId: 28108]
Probab=99.45 E-value=3.7e-14 Score=99.05 Aligned_cols=67 Identities=15% Similarity=0.203 Sum_probs=55.7
Q ss_pred cEEEEccEEEecCCCCceeeeeeEEEeCCEEEEecCChhhhhhhcCCCceEEeCCCCEeeccccccCccchh
Q 022028 20 TMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQ 91 (304)
Q Consensus 20 ~~li~~~~ii~~~~~~~~~~~~~I~I~~g~I~~i~~~~~~~~~~~~~~~~vID~~g~iv~PG~ID~H~Hl~~ 91 (304)
.++|+|++|+++.. ..++.+.+|+|++|+|.+|++.... ++...++||++|++|+|||+|+|+|...
T Consensus 2 ktlI~~g~liDg~~-~~~~~~~~I~I~~~~I~~V~~~~~~----~~~~~~vID~~G~~v~PGL~~g~~~d~~ 68 (96)
T d2qs8a1 2 KTLIHAGKLIDGKS-DQVQSRISIVIDGNIISDIKKGFIS----SNDFEDYIDLRDHTVLPSIESGKLADLI 68 (96)
T ss_dssp CEEEEEEEECCSSC-SSCEEEEEEEEETTEEEEEEESCCC----CTTSSEEEEEEEEEEEESCCTTSBCCEE
T ss_pred eEEEECeEEEECCC-CccccCceEEEECCEEEEEcccccC----CCCCCEEEECCCCEeccCccccCcccEE
Confidence 57899999998754 3577899999999999999875432 2346799999999999999999999644
|
| >d2fvka1 b.92.1.3 (A:2-56,A:441-541) Dihydropyrimidine amidohydrolase Pyd2 {Yeast (Saccharomyces kluyveri) [TaxId: 4934]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Composite domain of metallo-dependent hydrolases superfamily: Composite domain of metallo-dependent hydrolases family: Hydantoinase (dihydropyrimidinase) domain: Dihydropyrimidine amidohydrolase Pyd2 species: Yeast (Saccharomyces kluyveri) [TaxId: 4934]
Probab=99.43 E-value=5.3e-14 Score=108.05 Aligned_cols=66 Identities=20% Similarity=0.367 Sum_probs=55.6
Q ss_pred cccEEEEccEEEecCCCCceeeeeeEEEeCCEEEEecCChhhhhhhcCCCceEEeCCCCEe---eccccccCccchhh
Q 022028 18 SSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQIL---LPGFVNTHVHTSQQ 92 (304)
Q Consensus 18 ~~~~li~~~~ii~~~~~~~~~~~~~I~I~~g~I~~i~~~~~~~~~~~~~~~~vID~~g~iv---~PG~ID~H~Hl~~s 92 (304)
|.+++|+|++|++++. ...++|+|+||||++|++...+ ..++++||++|++| +|||||+|+|+...
T Consensus 2 m~dllikn~~v~~~~~----~~~~di~i~~g~I~~ig~~~~~-----~~~~~viDa~G~~V~p~~pg~~d~Hih~~~~ 70 (156)
T d2fvka1 2 IYDLIIKNGIICTASD----IYAAEIAVNNGKVQLIAASIDP-----SLGSEVIDAEGAFITPILPGVSDADLVIWYP 70 (156)
T ss_dssp CEEEEEESCEEECSSC----EEECEEEEETTEEEEEESCCCG-----GGEEEEEECTTCEEEECCTTTSBCCEEEECC
T ss_pred CccEEEECCEEECCCC----CEEEEEEEECCEEEEecCCCCC-----CCCCEEEECCCCEEeeecccccccceEEEee
Confidence 7789999999998652 3578999999999999986543 23679999999997 79999999999753
|
| >d1nfga1 b.92.1.3 (A:1-51,A:382-457) D-hydantoinase {Burkholderia pickettii [TaxId: 329]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Composite domain of metallo-dependent hydrolases superfamily: Composite domain of metallo-dependent hydrolases family: Hydantoinase (dihydropyrimidinase) domain: D-hydantoinase species: Burkholderia pickettii [TaxId: 329]
Probab=99.43 E-value=1.1e-13 Score=101.68 Aligned_cols=61 Identities=23% Similarity=0.361 Sum_probs=52.5
Q ss_pred cEEEEccEEEecCCCCceeeeeeEEEeCCEEEEecCChhhhhhhcCCCceEEeCCCCEeeccccccCccchh
Q 022028 20 TMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQ 91 (304)
Q Consensus 20 ~~li~~~~ii~~~~~~~~~~~~~I~I~~g~I~~i~~~~~~~~~~~~~~~~vID~~g~iv~PG~ID~H~Hl~~ 91 (304)
+++|+|++|++++ .. ..++|.|+||||++|++... .+.++||++|++|+||+||.|+|+..
T Consensus 2 Dllikn~~v~~~~---~~-~~~di~I~dg~I~~ig~~~~-------~~~~~iDa~G~~v~Pg~i~~~~~~~i 62 (127)
T d1nfga1 2 DIIIKNGTIVTAD---GI-SRADLGIKDGKITQIGGALG-------PAERTIDAAGRYVFPIAVGSDADIVL 62 (127)
T ss_dssp CEEEEEEEEEETT---EE-EEEEEEEETTEEEEESSCCC-------CCSEEEECTTCEEEECSTTSBCCEEE
T ss_pred cEEEECCEEECCC---CC-EEEEEEEECCEEEEeeCCCC-------CceEEEEeeceEEeeeccccccccee
Confidence 5899999999965 33 57899999999999998653 36799999999999999999999853
|
| >d1ynya1 b.92.1.3 (A:2-52,A:385-460) D-hydantoinase {Bacillus sp. AR9 [TaxId: 301298]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Composite domain of metallo-dependent hydrolases superfamily: Composite domain of metallo-dependent hydrolases family: Hydantoinase (dihydropyrimidinase) domain: D-hydantoinase species: Bacillus sp. AR9 [TaxId: 301298]
Probab=99.41 E-value=1.7e-13 Score=100.87 Aligned_cols=61 Identities=18% Similarity=0.272 Sum_probs=50.5
Q ss_pred EEEEccEEEecCCCCceeeeeeEEEeCCEEEEecCChhhhhhhcCCCceEEeCCCCEeeccccccCccchh
Q 022028 21 MILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQ 91 (304)
Q Consensus 21 ~li~~~~ii~~~~~~~~~~~~~I~I~~g~I~~i~~~~~~~~~~~~~~~~vID~~g~iv~PG~ID~H~Hl~~ 91 (304)
++|||++|++++ .. ..++|+|+||||++|++..+. .+.++||++|++|+||+||.|+|+..
T Consensus 2 ~likn~~i~~~~---~~-~~~di~I~~g~I~~ig~~~~~------~~~~viDa~g~~v~Pg~i~~~~~~~i 62 (127)
T d1ynya1 2 KWIRGGTVVTAA---DT-YQADVLIEGERVVAIGHQLSV------NGAEEIDATGCYVIPIAVGSDADIVI 62 (127)
T ss_dssp EEEESCEEECSS---CE-EECEEEEETTEEEEEECC----------CCEEEECTTSEEEECSTTSBCCEEE
T ss_pred EEEECcEEECCC---CC-EEEeEEEECCEEEEecCCCCC------CCCEEEEhhhceeecccccccchhhh
Confidence 689999999865 22 478999999999999987653 35699999999999999999999853
|
| >d1k1da1 b.92.1.3 (A:1-52,A:385-460) D-hydantoinase {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Composite domain of metallo-dependent hydrolases superfamily: Composite domain of metallo-dependent hydrolases family: Hydantoinase (dihydropyrimidinase) domain: D-hydantoinase species: Bacillus stearothermophilus [TaxId: 1422]
Probab=99.33 E-value=6.3e-13 Score=97.86 Aligned_cols=61 Identities=23% Similarity=0.359 Sum_probs=51.1
Q ss_pred cEEEEccEEEecCCCCceeeeeeEEEeCCEEEEecCChhhhhhhcCCCceEEeCCCCEeeccccccCccch
Q 022028 20 TMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTS 90 (304)
Q Consensus 20 ~~li~~~~ii~~~~~~~~~~~~~I~I~~g~I~~i~~~~~~~~~~~~~~~~vID~~g~iv~PG~ID~H~Hl~ 90 (304)
.++|+|++|++++ .. .+++|+|+||||++|++..+. .+.++||++|++|+||+||.|+|+.
T Consensus 2 ~~likn~~v~~~~---~~-~~~Di~I~~g~I~~Ig~~~~~------~~~~vida~g~~v~P~~v~~~~~~~ 62 (128)
T d1k1da1 2 TKIIKNGTIVTAT---DT-YEAHLLIKDGKIAMIGQNLEE------KGAEVIDAKGCYVFPIVVGSDADLV 62 (128)
T ss_dssp CEEEEEEEEECSS---CE-EEEEEEECSSBEEEEESSCCC------SSCCCEECTTCEEEECSTTSBCCEE
T ss_pred CEEEECcEEECCC---CC-EEeeEEEECCEEEEEcCCCCC------CceEEeeeCCCeEeeeecccccceE
Confidence 4789999999865 33 368999999999999987642 3568999999999999998888874
|
| >d1gkra1 b.92.1.3 (A:1-54,A:380-451) L-hydantoinase {Arthrobacter aurescens [TaxId: 43663]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Composite domain of metallo-dependent hydrolases superfamily: Composite domain of metallo-dependent hydrolases family: Hydantoinase (dihydropyrimidinase) domain: L-hydantoinase species: Arthrobacter aurescens [TaxId: 43663]
Probab=99.29 E-value=2.5e-12 Score=94.31 Aligned_cols=65 Identities=17% Similarity=0.315 Sum_probs=54.5
Q ss_pred cccEEEEccEEEecCCCCceeeeeeEEEeCCEEEEecCChhhhhhhcCCCceEEeCCCCEeeccc---cccCccchh
Q 022028 18 SSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGF---VNTHVHTSQ 91 (304)
Q Consensus 18 ~~~~li~~~~ii~~~~~~~~~~~~~I~I~~g~I~~i~~~~~~~~~~~~~~~~vID~~g~iv~PG~---ID~H~Hl~~ 91 (304)
|.+++|+|++|++.+ .. ..++|+|+||||++|++..+. ..+.++||++|++|+||+ .|+|.|+..
T Consensus 1 M~dllIkn~~iv~~~---~~-~~~Di~I~dgkI~~i~~~~~~-----~~a~~~iDa~g~~v~P~~~vG~DAD~~l~D 68 (126)
T d1gkra1 1 MFDVIVKNCRLVSSD---GI-TEADILVKDGKVAAISADTSD-----VEASRTIDAGGKFVMPTLQVGSDADLLILD 68 (126)
T ss_dssp CEEEEEEEEEEEETT---EE-EEEEEEEETTEEEEEESCCTT-----CCEEEEEECTTCEEEESCCTTSBCCEEEEE
T ss_pred CccEEEECcEEECCC---CC-EEEeEEEECCEEEEEcCcCCc-----ccceEEeehhhcccccceeecccchhheec
Confidence 578999999999854 33 467999999999999986542 236789999999999998 999999864
|
| >d1ra0a2 c.1.9.5 (A:56-375) Cytosine deaminase catalytic domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: Metallo-dependent hydrolases family: Cytosine deaminase catalytic domain domain: Cytosine deaminase catalytic domain species: Escherichia coli [TaxId: 562]
Probab=99.27 E-value=2.2e-12 Score=109.30 Aligned_cols=202 Identities=12% Similarity=0.060 Sum_probs=115.4
Q ss_pred ccccCccchhhhhhccc---CCCCccccccccccCccCCCChHHHHHHHHHHHHHHHhcCcceeecCCCCC---HH---H
Q 022028 82 FVNTHVHTSQQLAKGIA---DDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQH---VS---E 152 (304)
Q Consensus 82 ~ID~H~Hl~~s~~~g~~---~~~~~~~~l~~~~~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~d~~~~~---~~---~ 152 (304)
|||+|+|+.++..++.. ...++.+|+.. ..+....+++++++.++..++.+++.+||||+.++.... .. .
T Consensus 2 FID~H~Hl~~~~~~~~~~~~~~g~l~e~i~~-~~~~~~~~t~ed~~~~~~~~~~~~l~~GvTtv~~~~~~~~~~~~~~~~ 80 (320)
T d1ra0a2 2 FVEPHIHLDTTQTAGQPNWNQSGTLFEGIER-WAERKALLTHDDVKQRAWQTLKWQIANGIQHVRTHVDVSDATLTALKA 80 (320)
T ss_dssp EEEEEECTTTTTCTTSSSCCSSCCHHHHHHH-HHHHHTTCCHHHHHHHHHHHHHHHHHTTEEEEEEEEECCSTTCHHHHH
T ss_pred CeecCcCcchhcccCCCCCCCCCCHHHHHHH-HHHHHhcCCHHHHHHHHHHHHHHHHhCCeEEEEeccccccchHHHHHH
Confidence 99999999888766643 35677788754 234556789999999999999999999999999865321 11 1
Q ss_pred HHHHHHHcCCeEEeecccccCCCCCCCCcccCChHHHHHHHHHHHHHHcCCCCCCeEEEEeeCcccCCCHHHHHHHHHHH
Q 022028 153 MAKAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMA 232 (304)
Q Consensus 153 ~~~~~~~~gir~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~e~l~~~~~~a 232 (304)
.............+...... ..... ......+..++.++. ....+............+++.++.+.+.|
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~------~~~~~-~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~A 149 (320)
T d1ra0a2 81 MLEVKQEVAPWIDLQIVAFP------QEGIL-SYPNGEALLEEALRL----GADVVGAIPHFEFTREYGVESLHKTFALA 149 (320)
T ss_dssp HHHHHHHHTTTCEEEEEEEC------TTCSS-SSTTHHHHHHHHHHT----TCSEECCCGGGSSSHHHHHHHHHHHHHHH
T ss_pred HHHHHHhhcccccccccccc------ccccc-CcHHHHHHHHHHHHh----cccccccCCCCCCCccccHHHHHHHHHHH
Confidence 12222222222222211111 11000 011111222222222 22222211111122334678899999999
Q ss_pred HHhCCeeeEEecCChhhHHHHHHhcCCCCCHHHHHHHhCCCCCCeeEEEeccCCcc-------hhc-----------ccc
Q 022028 233 REFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHT-------EVN-----------CTF 294 (304)
Q Consensus 233 ~~~~~~~~~H~~E~~~~~~~~~~~~g~~~~~~~~l~~~g~l~~~~~~~H~~~l~~~-------di~-----------~p~ 294 (304)
++.++++.+|+++...+.....+.+ ........+ ..+....|+.+.... ++. ||.
T Consensus 150 ~~~g~~~~~h~~~~~~~~~~~~~~~------~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~ 222 (320)
T d1ra0a2 150 QKYDRLIDVHCDEIDDEQSRFVETV------AALAHHEGM-GARVTASHTTAMHSYNGAYTSRLFRLLKMSGINFVANPL 222 (320)
T ss_dssp HHHTCEEEEEECCSSCTTCCHHHHH------HHHHHHHTC-GGGEEEEECGGGGGSCHHHHHHHHHHHHHHTCEEEECHH
T ss_pred HHcCCCeeeeecccchhHHHhhhhH------HHHHHHhhc-ccccccccceeccccchhhhHHHHHHhhhcCcEEEeccc
Confidence 9999999999998877655444422 222233333 335567777655332 222 888
Q ss_pred cccccccc
Q 022028 295 GNFKYAVH 302 (304)
Q Consensus 295 sN~~l~~~ 302 (304)
+|..++.+
T Consensus 223 ~~~~~~~~ 230 (320)
T d1ra0a2 223 VNIHLQGR 230 (320)
T ss_dssp HHHHHTTT
T ss_pred hhhhhccc
Confidence 88887754
|
| >d1gkpa1 b.92.1.3 (A:2-54,A:390-459) D-hydantoinase {Thermus sp. [TaxId: 275]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Composite domain of metallo-dependent hydrolases superfamily: Composite domain of metallo-dependent hydrolases family: Hydantoinase (dihydropyrimidinase) domain: D-hydantoinase species: Thermus sp. [TaxId: 275]
Probab=99.23 E-value=4.4e-12 Score=92.29 Aligned_cols=62 Identities=19% Similarity=0.349 Sum_probs=51.4
Q ss_pred EEEEccEEEecCCCCceeeeeeEEEeCCEEEEecCChhhhhhhcCCCceEEeCCCCEeeccccccCccchh
Q 022028 21 MILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQ 91 (304)
Q Consensus 21 ~li~~~~ii~~~~~~~~~~~~~I~I~~g~I~~i~~~~~~~~~~~~~~~~vID~~g~iv~PG~ID~H~Hl~~ 91 (304)
++|||++|++++ . ..+++|+|+||||.+|++..+. +++.++||++|++|+||..++|.|...
T Consensus 2 llIkng~iv~~~---~-~~~~Di~I~~gkI~~Ig~~l~~-----~~~~~viDa~G~~v~~g~d~~~~d~~~ 63 (123)
T d1gkpa1 2 LLIKNGEIITAD---S-RYKADIYAEGETITRIGQNLEA-----PPGTEVIDATGKYVFPGADLVVYDPQY 63 (123)
T ss_dssp EEEESCEEEETT---E-EEECEEEESSSBCCEEESCCCC-----CTTCEEEECTTSEEEECCCEEEEETTC
T ss_pred EEEECcEEECCC---C-CEEeeEEEECCEEEEeecCCCC-----CcchhhhhhccceEecCcceEEEeccc
Confidence 789999999865 3 3578999999999999987653 346799999999999999777776644
|
| >d1m7ja1 b.92.1.6 (A:7-61) N-acyl-D-aminoacid amidohydrolase {Alcaligenes faecalis [TaxId: 511]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Composite domain of metallo-dependent hydrolases superfamily: Composite domain of metallo-dependent hydrolases family: D-aminoacylase domain: N-acyl-D-aminoacid amidohydrolase species: Alcaligenes faecalis [TaxId: 511]
Probab=99.16 E-value=4.2e-11 Score=74.18 Aligned_cols=54 Identities=26% Similarity=0.309 Sum_probs=45.0
Q ss_pred ccEEEEccEEEecCCCCceeeeeeEEEeCCEEEEecCChhhhhhhcCCCceEEeCCCCEeec
Q 022028 19 STMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLP 80 (304)
Q Consensus 19 ~~~li~~~~ii~~~~~~~~~~~~~I~I~~g~I~~i~~~~~~~~~~~~~~~~vID~~g~iv~P 80 (304)
.+++|+|++|+++.. .....++|+|+||||++|++..+ ..+.++||++|++|+|
T Consensus 2 ~DllIkn~~i~d~~~--~~~~~~di~I~~g~I~~Ig~~~~------~~~~~vIDa~G~~v~P 55 (55)
T d1m7ja1 2 FDYILSGGTVIDGTN--APGRLADVGVRGDRIAAVGDLSA------SSARRRIDVAGKVVSP 55 (55)
T ss_dssp BSEEEESSEECCSSS--CCCEECEEEEETTEEEEEECCTT------SCBSCEEECTTCEEEE
T ss_pred CcEEEECCEEECCCC--CceeEEEEEEECCEEEEEccCCC------CCCCEEEECCCCEECC
Confidence 568999999998663 34467899999999999998654 2367899999999998
|
| >d1kcxa1 b.92.1.3 (A:15-66,A:401-490) Dihydropyrimidinase related protein-1 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Composite domain of metallo-dependent hydrolases superfamily: Composite domain of metallo-dependent hydrolases family: Hydantoinase (dihydropyrimidinase) domain: Dihydropyrimidinase related protein-1 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.04 E-value=1.9e-10 Score=85.49 Aligned_cols=63 Identities=14% Similarity=0.254 Sum_probs=52.7
Q ss_pred cEEEEccEEEecCCCCceeeeeeEEEeCCEEEEecCChhhhhhhcCCCceEEeCCCCEeeccc-cccCccchh
Q 022028 20 TMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGF-VNTHVHTSQ 91 (304)
Q Consensus 20 ~~li~~~~ii~~~~~~~~~~~~~I~I~~g~I~~i~~~~~~~~~~~~~~~~vID~~g~iv~PG~-ID~H~Hl~~ 91 (304)
.++|+|++|++.+ .. ..++|+|+||+|.+|+..... +.++++||+.|++++||. +|+|.|+..
T Consensus 2 k~lIkng~iv~~~---~~-~~~DilIedG~I~~Ig~~l~~-----~~~a~vIDa~G~~v~~~~G~dAdl~i~D 65 (142)
T d1kcxa1 2 RLLIRGGRIINDD---QS-FYADVYLEDGLIKQIGENLIV-----PGGVKTIEANGRMVIIAVGSDADVVIWD 65 (142)
T ss_dssp CEEEESCEEECSS---CE-EECEEEEETTEEEEEESSCCS-----CSSCEEEECTTCEEECCTTSBCCEEEEE
T ss_pred cEEEECCEEECCC---Cc-EEeeEEEECCEEeEEeccCCC-----CccceeechhhcceeecccccceEEEEe
Confidence 4789999999854 22 357999999999999976542 236799999999999998 999999964
|
| >d2bb0a2 c.1.9.17 (A:74-373) Imidazolonepropionase {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: Metallo-dependent hydrolases family: Imidazolonepropionase-like domain: Imidazolonepropionase species: Bacillus subtilis [TaxId: 1423]
Probab=99.02 E-value=4e-10 Score=94.01 Aligned_cols=201 Identities=14% Similarity=0.062 Sum_probs=110.5
Q ss_pred ccccccCccchhhhhhccc-----CCCCcccccccc--cc---CccCCCChHHHHHHHHHHHHHHHhcCcceeecCCCCC
Q 022028 80 PGFVNTHVHTSQQLAKGIA-----DDVDLMTWLHDR--IW---PYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQH 149 (304)
Q Consensus 80 PG~ID~H~Hl~~s~~~g~~-----~~~~~~~~l~~~--~~---~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~d~~~~~ 149 (304)
|||||+|+|+.++..|... ...++.++.... +. ......++++++........+++.+|+|++.+.....
T Consensus 1 PGlID~H~Hl~~~~~~~~~~~~~~~g~~~~~~~~~~~~i~~~v~~~~~~~~~~l~~~~~~~~~~~~~~G~t~~~~~~~~~ 80 (300)
T d2bb0a2 1 PGLVDPHTHLVFGGSREKEMNLKLQGISYLDILAQGGGILSTVKDTRAASEEELLQKAHFHLQRMLSYGTTTAEVKSGYG 80 (300)
T ss_dssp ECEEECCBCCCCCSCCGGGHHHHHTTCCHHHHHHTTCTHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTTEEEEEEECCSC
T ss_pred CCeeccccCcCcccccchHHHHHhcCCCHHHHHHhcCCcchHHHHHhcCCHHHHHHHHHHHHHHHHhCCceeeecccccc
Confidence 9999999999654332210 011111111100 00 0012356788888888899999999999997654321
Q ss_pred --HHH-------HHHHHHHcCCeEEeecccccCCCCCCCCcccCChHHHHHHHHHHHHHHcCCCCCCeEEEEeeCcccCC
Q 022028 150 --VSE-------MAKAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNA 220 (304)
Q Consensus 150 --~~~-------~~~~~~~~gir~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 220 (304)
... ..........+...... .+. ..+...........+...+.+....... .....-........
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~ 154 (300)
T d2bb0a2 81 LEKETELKQLRVAKKLHESQPVDLVSTFM---GAH-AIPPEYQNDPDDFLDQMLSLLPEIKEQE--LASFADIFTETGVF 154 (300)
T ss_dssp CSHHHHHHHHHHHHHHHHHSSSEEEEEEE---EES-SCCGGGTTCHHHHHHHHHTTHHHHHHTT--CCSEEEEBBCTTSB
T ss_pred cchhHHHHHHHhhhhHHHhhccccccccc---ccc-cchhhhhhcHHHHHHHHHHHHHHhhhcc--cccccccccccccC
Confidence 111 11111222222211110 011 1122222234444444444443333222 22223334444567
Q ss_pred CHHHHHHHHHHHHHhCCeeeEEecCChhhHHHHHHhcCCCCCHHHHHHHhCCCCCCeeEEEeccCCcchhc---------
Q 022028 221 TDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEVN--------- 291 (304)
Q Consensus 221 ~~e~l~~~~~~a~~~~~~~~~H~~E~~~~~~~~~~~~g~~~~~~~~l~~~g~l~~~~~~~H~~~l~~~di~--------- 291 (304)
+.+.+.++.+.+++.++.+..|+.+..... ......+.+ ...+.|+.+++++++.
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~------------~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (300)
T d2bb0a2 155 TVSQSRRYLQKAAEAGFGLKIHADEIDPLG------------GAELAGKLK----AVSADHLVGTSDEGIKKLAEAGTIA 218 (300)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECSSSCCS------------HHHHHHHTT----CSEEEECTTCCHHHHHHHHHHTCEE
T ss_pred CHHHHHHHHHHHHhhhhcccccccchhhhH------------HHHHHHHhC----CceEEEeeeccHHHHHHHHhcCcce
Confidence 888899999999999999999987654321 222333333 3478999999998887
Q ss_pred --ccccccccccc
Q 022028 292 --CTFGNFKYAVH 302 (304)
Q Consensus 292 --~p~sN~~l~~~ 302 (304)
||.||.++...
T Consensus 219 ~~~~~s~~~l~~~ 231 (300)
T d2bb0a2 219 VLLPGTTFYLGKS 231 (300)
T ss_dssp EECHHHHHHTTCC
T ss_pred eecchhhhhhhcc
Confidence 99999887644
|
| >d2ftwa1 b.92.1.3 (A:7-59,A:394-490) Dihydropyrimidine amidohydrolase Pyd2 {Dictyostelium discoideum [TaxId: 44689]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Composite domain of metallo-dependent hydrolases superfamily: Composite domain of metallo-dependent hydrolases family: Hydantoinase (dihydropyrimidinase) domain: Dihydropyrimidine amidohydrolase Pyd2 species: Dictyostelium discoideum [TaxId: 44689]
Probab=98.87 E-value=2.1e-09 Score=80.42 Aligned_cols=64 Identities=20% Similarity=0.298 Sum_probs=51.7
Q ss_pred ccEEEEccEEEecCCCCceeeeeeEEEeCCEEEEecCChhhhhhhcCCCceEEeCCCCEeecc-ccccCccchh
Q 022028 19 STMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPG-FVNTHVHTSQ 91 (304)
Q Consensus 19 ~~~li~~~~ii~~~~~~~~~~~~~I~I~~g~I~~i~~~~~~~~~~~~~~~~vID~~g~iv~PG-~ID~H~Hl~~ 91 (304)
.+++|+|++|++.+ +. ..++|+|+||+|..|+.+... ..++++||+.|++++|+ ..|+|+|+..
T Consensus 2 ~~iLIkng~iv~~~---~~-~~~DIlI~~G~I~~I~~~i~~-----~~~~~iida~gk~v~i~~G~dad~~i~d 66 (150)
T d2ftwa1 2 GTILIKNGTVVNDD---RY-FKSDVLVENGIIKEISKNIEP-----KEGIKVVDATDKLLLIDVGCDGDIVIWD 66 (150)
T ss_dssp CCEEEESCEEECSS---CE-EECEEEEETTEEEEEESCCCC-----CSSCCEEECTTCEEECSTTSBCCEEEEE
T ss_pred CCEEEECCEEECCC---Cc-EEeeEEEECCEEEEEeccCCC-----CCccEEEecccceeeeecCccCceEEEe
Confidence 45899999999843 33 467999999999999987652 24679999999988555 5999999965
|
| >d2q09a2 c.1.9.17 (A:66-366) Probable 4-imidazolone-5-propanoate amidohydrolase GOS_1928421 {Environmental samples} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: Metallo-dependent hydrolases family: Imidazolonepropionase-like domain: Probable 4-imidazolone-5-propanoate amidohydrolase GOS 1928421 species: Environmental samples
Probab=98.83 E-value=1e-09 Score=90.52 Aligned_cols=164 Identities=13% Similarity=0.123 Sum_probs=89.2
Q ss_pred CCChHHHHHHHHHHHHHHHhcCcceeecCCCCC--HH---HHHHH----HHHcCCeEEeecccccCCCCCCCCcccCChH
Q 022028 117 NMTEEDSYISTLLCGIELIHSGVTCFAEAGGQH--VS---EMAKA----VELLGLRACLVQSTMDCGEGLPASWAVRTTD 187 (304)
Q Consensus 117 ~~~~e~~~~~~~~~~~~~l~~GvTtv~d~~~~~--~~---~~~~~----~~~~gir~~~~~~~~d~g~~~~~~~~~~~~~ 187 (304)
.+++++++..++....+++.+|+|++.+..... .. ...+. .....+..... ...+...++.+.. ...
T Consensus 48 ~~~~~~~~~~~~~~~~~~~~~G~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~-~~~ 123 (301)
T d2q09a2 48 AASEDQLFELALPRVKSLIREGVTTVEIKSGYGLTLEDELKMLRVARRLGEALPIRVKTT---LLAAHAVPPEYRD-DPD 123 (301)
T ss_dssp HSCHHHHHHHHHHHHHHHHHHTEEEEEEECCSCCSHHHHHHHHHHHHHHHHHSSSEEEEE---EEEETSCCGGGTT-CHH
T ss_pred cCCHHHHHHHHHHHHHHHhcCCeeeecccccccchhhHHHHHHHhhhhhhhhcccccccc---cccccccChhhcc-CHH
Confidence 467788888888889999999999998764321 11 11111 12222222111 1112223333322 222
Q ss_pred HHHHHHHH-HHHHHcCCCCCCeEEEEeeCcccCCCHHHHHHHHHHHHHhCCeeeEEecCChhhHHHHHHhcCCCCCHHHH
Q 022028 188 DCIQSQKE-LYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTF 266 (304)
Q Consensus 188 ~~~~~~~~-~~~~~~~~~~~~i~~~~~~~~~~~~~~e~l~~~~~~a~~~~~~~~~H~~E~~~~~~~~~~~~g~~~~~~~~ 266 (304)
..++.... ........ ......-...................+......+.+|..+..... ....
T Consensus 124 ~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~------------~~~~ 189 (301)
T d2q09a2 124 SWVETICQEIIPAAAEA--GLADAVDVFCEHIGFSLAQTEQVYLAADQYGLAVKGHMDQLSNLG------------GSTL 189 (301)
T ss_dssp HHHHHHHHTHHHHHHHT--TCCSEEEEBBSTTSBCHHHHHHHHHHHHHTTCEEEEEESSSCCCS------------HHHH
T ss_pred HHHHHHHHHHHhhhhhh--hhhhhhhhhhcccccchhhHHHHHHHHHHhcccceecccccchhH------------HHHH
Confidence 33332211 11111111 111111222233345566666788888899999999987665322 1222
Q ss_pred HHHhCCCCCCeeEEEeccCCcchhc-----------ccccccccccc
Q 022028 267 LDKIEFLQNNLLSAHTVWVNHTEVN-----------CTFGNFKYAVH 302 (304)
Q Consensus 267 l~~~g~l~~~~~~~H~~~l~~~di~-----------~p~sN~~l~~~ 302 (304)
....+ ...+.||.+++++++. ||.+|.+++..
T Consensus 190 ~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~ 232 (301)
T d2q09a2 190 AANFG----ALSVDHLEYLDPEGIQALAHRGVVATLLPTAFYFLKET 232 (301)
T ss_dssp HHHTT----CSEEEECTTCCHHHHHHHHHHTCEEEECHHHHHHTTCC
T ss_pred HHhcC----CceEeeeecCcHHHHHHHHHcCCCcccCccHHhhhccc
Confidence 22222 4578999999998887 99999988765
|
| >d2puza2 c.1.9.17 (A:80-380) Imidazolonepropionase {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: Metallo-dependent hydrolases family: Imidazolonepropionase-like domain: Imidazolonepropionase species: Agrobacterium tumefaciens [TaxId: 358]
Probab=98.75 E-value=3.9e-08 Score=81.38 Aligned_cols=194 Identities=13% Similarity=0.138 Sum_probs=98.0
Q ss_pred ccccccCccchhhhhhcc-----cCCCCcccccccc--c---cCccCCCChHHHHHHHHHHHHHHHhcCcceeecCCCCC
Q 022028 80 PGFVNTHVHTSQQLAKGI-----ADDVDLMTWLHDR--I---WPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQH 149 (304)
Q Consensus 80 PG~ID~H~Hl~~s~~~g~-----~~~~~~~~~l~~~--~---~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~d~~~~~ 149 (304)
|||||+|+|+.++..+.. ..+.++.++.... + ....+..++++++..++....+++++|+|++.+.....
T Consensus 1 PGlID~H~Hl~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~e~l~~~~~~~~~~~~~~G~t~~~~~~~~~ 80 (301)
T d2puza2 1 PALIDCHTHLVFGGNRAMEFEMRLNGATYEEIAKAGGGIVSSVRDTRALSDEVLVAQALPRLDTLLSEGVSTIEIKSGYG 80 (301)
T ss_dssp ECEEECCCCCCCSSCCHHHHHHHHTTCCHHHHHHTTCSHHHHHHHHHHSCHHHHHHHHHHHHHHHHTTTEEEEEEECCSC
T ss_pred CCeeccccCcCcCCccchHHHHhhcCCCHHHHHHhcCCccchHHHHhcCCHHHHHHHHHHHHHHHHHCCceEeccccccC
Confidence 999999999864322110 0111211111100 0 00113457888889999999999999999997654321
Q ss_pred --HH---HHHHHHHHcC-CeEEeecccccCCCCCCCCcccCChHHHHHHHHHHHHHHcCCCCCCeEEEEeeCcccCCCHH
Q 022028 150 --VS---EMAKAVELLG-LRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDR 223 (304)
Q Consensus 150 --~~---~~~~~~~~~g-ir~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~e 223 (304)
.. ...+...... .+..........+....+.................+....... ................+
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~ 158 (301)
T d2puza2 81 LDIETELKMLRVARRLETLRPVRIVTSYLAAHATPADYKGRNADYITDVVLPGLEKAHAEG--LADAVDGFCEGIAFSVK 158 (301)
T ss_dssp CSHHHHHHHHHHHHHHTTTSSCEEEEEECCTTCCCGGGTTCHHHHHHHTHHHHHHHHHHTT--CCSEECCEESTTSBCHH
T ss_pred cchhhHHHHHHHHHHHHHhccccccccccccccchhhhhcchhhHHHHHHHHHHHHHHhhh--hhhhccccccccccCHH
Confidence 11 1122222111 1111001111111111122221112222222222222222211 11122233344567888
Q ss_pred HHHHHHHHHHHhCCeeeEEecCChhhHHHHHHhcCCCCCHHHHHHHhCCCCCCeeEEEeccCCcchhc
Q 022028 224 LLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEVN 291 (304)
Q Consensus 224 ~l~~~~~~a~~~~~~~~~H~~E~~~~~~~~~~~~g~~~~~~~~l~~~g~l~~~~~~~H~~~l~~~di~ 291 (304)
.++.+.+.+.+.|+++..|+.+..... ......+.+ ...+.|+.+.+++++.
T Consensus 159 ~~~~~~~~a~~~g~~~~~h~~~~~~~~------------~~~~~~~~~----~~~~~~~~~~~~~~~~ 210 (301)
T d2puza2 159 EIDRVFAAAQQRGLPVKLHAEQLSNLG------------GAELAASYN----ALSADHLEYLDETGAK 210 (301)
T ss_dssp HHHHHHHHHHHTTCCBEEEESSSSCCS------------HHHHHHHTT----CSEEEECTTCCHHHHH
T ss_pred HHHHHHHHHHHCCCceeeecccccchh------------HHHHHhhhc----cceeeeeecchHHHHH
Confidence 999999999999999999998766432 223333333 3478899999888876
|
| >d2p9ba2 c.1.9.17 (A:71-394) Uncharacterized protein BL1453 {Bifidobacterium longum [TaxId: 216816]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: Metallo-dependent hydrolases family: Imidazolonepropionase-like domain: Uncharacterized protein BL1453 species: Bifidobacterium longum [TaxId: 216816]
Probab=98.67 E-value=2.1e-08 Score=82.83 Aligned_cols=211 Identities=12% Similarity=-0.006 Sum_probs=94.8
Q ss_pred ccccccCccchhhhhhcccCCCCccccccccccCccCCCChHHHHHHHHHHHHHHHhcCcceeecCCCCCH-HHHHHHHH
Q 022028 80 PGFVNTHVHTSQQLAKGIADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQHV-SEMAKAVE 158 (304)
Q Consensus 80 PG~ID~H~Hl~~s~~~g~~~~~~~~~~l~~~~~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~d~~~~~~-~~~~~~~~ 158 (304)
|||||+|+|++.+..++.........|.. .........++++.+..++.++.+++++||||+++..+... ....+...
T Consensus 1 PGlID~H~H~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTt~~~~~~~~~~~~~~~~~~ 79 (324)
T d2p9ba2 1 PGLINAHTHLFSQGKPLNPKLATPKGQRM-VATFAHSPLGKPYMAATVKHNATTLLESGVTTIRTLGDVGYEVVTLRDQI 79 (324)
T ss_dssp ECEEEEEECSCC------------------------------CHHHHHHHHHHHHHHTTEEEEEESCCSSSHHHHHHHHH
T ss_pred CCeeccccCccccCccccchhcccccchh-hhhhhhccCCHHHHHHHHHHHHHHHHhCCceEEeccCCCcchhHHHHHHh
Confidence 99999999998776554322222222211 11223344677788899999999999999999999865322 22222222
Q ss_pred HcC----CeEEeecccccCCCC--CCCCcccC-ChHHHHHHHHHHHHHHcCCC------CCCeEEEEeeCcccCCCHHHH
Q 022028 159 LLG----LRACLVQSTMDCGEG--LPASWAVR-TTDDCIQSQKELYAKHHHAA------DGRIRIWFGIRQIMNATDRLL 225 (304)
Q Consensus 159 ~~g----ir~~~~~~~~d~g~~--~~~~~~~~-~~~~~~~~~~~~~~~~~~~~------~~~i~~~~~~~~~~~~~~e~l 225 (304)
... .+............. ........ ......+...+......... ................+....
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (324)
T d2p9ba2 80 DAGQILGPRILASGPLMAIPEGHGAPLIALTSGTPEEARTAVAQNLKAGVNAIKIAATGGVTDAQEIGEAGSPQMSVEQM 159 (324)
T ss_dssp HTTSSCCCEEECCCSCEECCCSSCCCCEECCSCCHHHHHHHHHHHHHTTCSCEEEECSCCTTSCCCC------CCCHHHH
T ss_pred hhhhccccccccccccccCCcccccccccccchhHHHHHHHHHHHHhhccchhhhhcccccccccccccccchhccHHHH
Confidence 222 222211111111100 01111111 22222223333333221100 000000011112234566777
Q ss_pred HHHHHHHHHhCCeeeEEecCChhhHHHHHHhcC-----C--CCCHHHHHHHhCCCCCCeeEEEeccCCcchhc
Q 022028 226 LETRDMAREFKTGIHMHVAEIPYENQVVMDTRK-----V--DHGTVTFLDKIEFLQNNLLSAHTVWVNHTEVN 291 (304)
Q Consensus 226 ~~~~~~a~~~~~~~~~H~~E~~~~~~~~~~~~g-----~--~~~~~~~l~~~g~l~~~~~~~H~~~l~~~di~ 291 (304)
....+.....+.....|................ . .......+.+.|.+.......|+......++.
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (324)
T d2p9ba2 160 RAICDEAHQYGVIVGAHAQSPEGVRRSLLAGVDTIEHGSVLDDELIGMFRHNPNALRGYSALIPTLSAGLPLT 232 (324)
T ss_dssp HHHHHHHHHTTCCEEEEECSHHHHHHHHHHTCSEEEECCCCCHHHHHHHHCCTTSTTSCCEEECCHHHHHHHH
T ss_pred HHHHHHHHHcCCccccccccchhhhHHHHhhhhhhhhhhhhhhhHHHHHHHcCccccccceeeecccccchHH
Confidence 778888888899988887655443333222111 0 01134566777888888888888877765544
|
| >d1xrta1 b.92.1.3 (A:1-55,A:366-422) Two-domain dihydroorotase {Aquifex aeolicus [TaxId: 63363]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Composite domain of metallo-dependent hydrolases superfamily: Composite domain of metallo-dependent hydrolases family: Hydantoinase (dihydropyrimidinase) domain: Two-domain dihydroorotase species: Aquifex aeolicus [TaxId: 63363]
Probab=98.66 E-value=3.3e-08 Score=70.29 Aligned_cols=57 Identities=19% Similarity=0.304 Sum_probs=47.6
Q ss_pred cccEEEEccEEEecCCCCceeeeeeEEEeCCEEEEecCChhhhhhhcCCCceEEeCCCCEeeccc
Q 022028 18 SSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGF 82 (304)
Q Consensus 18 ~~~~li~~~~ii~~~~~~~~~~~~~I~I~~g~I~~i~~~~~~~~~~~~~~~~vID~~g~iv~PG~ 82 (304)
|+.++|+|++|+++. +......+|+|++|+|.+|++..+. .+.++||+.|+++.||+
T Consensus 1 m~~~likng~viDp~--~g~~~~~DllI~~GkI~~I~~~i~~------~~a~viD~~g~~~~~~l 57 (112)
T d1xrta1 1 MLKLIVKNGYVIDPS--QNLEGEFDILVENGKIKKIDKNILV------PEAEIIDAKGLIVCPTL 57 (112)
T ss_dssp CCEEEEESCEEEEGG--GTEEEECEEEEETTEEEEEESSCCC------SSEEEEECTTSEEEECC
T ss_pred CceeEEeCeEEECCC--CCccceeeEEEECCEEEEeecCCCc------ccceEEehhccccccee
Confidence 456899999999865 4566788999999999999876542 25689999999999998
|
| >d1e9yb1 b.92.1.1 (B:1-131,B:432-480) alpha-Subunit of urease {Helicobacter pylori [TaxId: 210]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Composite domain of metallo-dependent hydrolases superfamily: Composite domain of metallo-dependent hydrolases family: alpha-Subunit of urease domain: alpha-Subunit of urease species: Helicobacter pylori [TaxId: 210]
Probab=98.58 E-value=1.7e-07 Score=69.71 Aligned_cols=81 Identities=17% Similarity=0.198 Sum_probs=59.9
Q ss_pred CCCCCCCCCCCcccEEEEccEEEecCCCCceeeeeeEEEeCCEEEEecCChhhhhh-------hcCCCceEEeCCCCEee
Q 022028 7 GGGSSSGSLGSSSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQ-------FSQMADQIIDLQSQILL 79 (304)
Q Consensus 7 ~~~~~~~~~~~~~~~li~~~~ii~~~~~~~~~~~~~I~I~~g~I~~i~~~~~~~~~-------~~~~~~~vID~~g~iv~ 79 (304)
|+++++.......+++|+|+.|++.. .+ .+++|.|+||||+.|+++..+... ..+...++|.++|+++.
T Consensus 54 Gmgq~~~~~~~~~D~vitna~iid~~---Gi-~kadiGikdG~I~~iGkaGnPd~mdgv~~~~iig~~Tevi~geg~I~T 129 (180)
T d1e9yb1 54 GMSQSNNPSKEELDLIITNALIVDYT---GI-YKADIGIKDGKIAGIGKGGNKDMQDGVKNNLSVGPATEALAGEGLIVT 129 (180)
T ss_dssp TTTBCSSCCTTCCSEEEEEEEEEETT---EE-EEEEEEEETTEEEEEECCBCTTTSSSCCGGGBCCTTCEEEECTTCEEE
T ss_pred ccCCCCCCCccccceEEEeeEEeccC---Ce-EEeeeeeeCCEEEEeeccCCccccCCCCCCeEECCCceEEecCCceEe
Confidence 34444433333467999999999843 44 578999999999999987654321 12335799999999999
Q ss_pred ccc----cccCccchh
Q 022028 80 PGF----VNTHVHTSQ 91 (304)
Q Consensus 80 PG~----ID~H~Hl~~ 91 (304)
||= +|.|+|.-.
T Consensus 130 aGADlVlwd~h~hgIk 145 (180)
T d1e9yb1 130 AGADLVLWSPAFFGVK 145 (180)
T ss_dssp ECCCEEEECTTTTTTC
T ss_pred cCcceEEEchhhcCCC
Confidence 996 999999754
|
| >d4ubpc1 b.92.1.1 (C:1-131,C:435-483) alpha-Subunit of urease {Bacillus pasteurii [TaxId: 1474]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Composite domain of metallo-dependent hydrolases superfamily: Composite domain of metallo-dependent hydrolases family: alpha-Subunit of urease domain: alpha-Subunit of urease species: Bacillus pasteurii [TaxId: 1474]
Probab=98.51 E-value=2.1e-07 Score=69.25 Aligned_cols=69 Identities=16% Similarity=0.175 Sum_probs=54.9
Q ss_pred cccEEEEccEEEecCCCCceeeeeeEEEeCCEEEEecCChhhhhh-------hcCCCceEEeCCCCEeeccccccCccch
Q 022028 18 SSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQ-------FSQMADQIIDLQSQILLPGFVNTHVHTS 90 (304)
Q Consensus 18 ~~~~li~~~~ii~~~~~~~~~~~~~I~I~~g~I~~i~~~~~~~~~-------~~~~~~~vID~~g~iv~PG~ID~H~Hl~ 90 (304)
..+++|+|+.|++. ..+ .+++|.|+||||+.|+++.++..+ .-+...++|.++|+++.||-||.|.|+.
T Consensus 66 ~~d~vitn~~i~d~---~Gi-~KadiGikdG~I~giGkaGNPd~mdgV~~~~vig~~Teviageg~I~TagvIdthvHFp 141 (180)
T d4ubpc1 66 VLDLLLTNALILDY---TGI-YKADIGVKDGYIVGIGKGGNPDIMDGVTPNMIVGTATEVIAAEGKIVTALVLWEPKFFG 141 (180)
T ss_dssp BCSEEEEEEEEEET---TEE-EEEEEEEETTEEEEEECCBCTTTCTTCCTTCBCCTTCEEEECTTCEEEEEEEECGGGTT
T ss_pred cceEEEeeEEEecC---CCe-EEeeeeeecCEEEEeeccCCccccCCCCCCeEEcCCceEEecCCceEEEEEEeehhhcC
Confidence 45689999988874 244 578999999999999987764321 1133679999999999999999999973
|
| >d2puza1 b.92.1.10 (A:17-79,A:381-420) Imidazolonepropionase {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Composite domain of metallo-dependent hydrolases superfamily: Composite domain of metallo-dependent hydrolases family: Imidazolonepropionase-like domain: Imidazolonepropionase species: Agrobacterium tumefaciens [TaxId: 358]
Probab=98.50 E-value=2e-07 Score=65.00 Aligned_cols=71 Identities=20% Similarity=0.197 Sum_probs=57.2
Q ss_pred cEEEEccEEEecCCC---CceeeeeeEEEeCCEEEEecCChhhhhhhcCCCceEEeCCCCEeeccccccCccchh
Q 022028 20 TMILHNAVIVTMDKE---SRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQ 91 (304)
Q Consensus 20 ~~li~~~~ii~~~~~---~~~~~~~~I~I~~g~I~~i~~~~~~~~~~~~~~~~vID~~g~iv~PG~ID~H~Hl~~ 91 (304)
+.+++|++|.|++++ ...++++.|.|++|||.+||+..+.+..+. .+.+++|++|+++.+.--..+.++-.
T Consensus 2 ~~l~~n~~iaTm~~~~~~~g~ie~aAl~v~~g~I~~vG~~~~l~~~~~-~aa~viDl~Grlv~i~~Gk~AD~~i~ 75 (103)
T d2puza1 2 TALWRNAQLATLNPAMDGIGAVENAVIAVRNGRIAFAGPESDLPDDLS-TADETTDCGGRWITLEAGKSADFAIW 75 (103)
T ss_dssp EEEEEEEEEECCCTTSSTTCEEEEEEEEEETTEEEEEEETTSCCGGGS-CCSEEEECTTCEEECCTTSBCCEEEE
T ss_pred cEEEEcCEEEEcCCCCCcchHHHHHHHHhhCCCccccChhhhcchhhh-chHhhcCCCCCEEEeeccceeeEEEE
Confidence 578999999999875 347899999999999999999876543322 35689999999999888777777643
|
| >d3be7a2 c.1.9.18 (A:57-359) Zn-dependent arginine carboxypeptidase {Unidentified organism [TaxId: 32644]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: Metallo-dependent hydrolases family: Zn-dependent arginine carboxypeptidase-like domain: Zn-dependent arginine carboxypeptidase species: Unidentified organism [TaxId: 32644]
Probab=98.35 E-value=2e-07 Score=76.40 Aligned_cols=191 Identities=12% Similarity=0.057 Sum_probs=96.3
Q ss_pred cccccCccchhhhhhcccCCCCccccccccccCccCCCChHHHHHHHHHHHHHHHhcCcceeecCCCCCHH--HHHHHHH
Q 022028 81 GFVNTHVHTSQQLAKGIADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQHVS--EMAKAVE 158 (304)
Q Consensus 81 G~ID~H~Hl~~s~~~g~~~~~~~~~~l~~~~~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~d~~~~~~~--~~~~~~~ 158 (304)
||||+|+|+..+..++. .| ....++..+..+...+.++|.+||||++|.++.... ...+...
T Consensus 1 GlID~H~Hl~~~~~~~~-------~~---------~~~~~~~~~~~~~~~~~~~L~~GVTtv~d~~~~~~~~~~~~~~~~ 64 (303)
T d3be7a2 1 GLMDSHVHIVGNDSKGE-------ES---------IADSSHMGTVWGVVNAEKTLMAGFTTVRNVGAANYADVSVRDAIE 64 (303)
T ss_dssp CEEEEEECCSSCCCCSG-------GG---------TTCCTHHHHHHHHHHHHHHHTTTEEEEEECCCSTTHHHHHHHHHH
T ss_pred CeEEeccCcccCCCcch-------hh---------hhcChhhHHHHHHHHHHHHHhcCeeEEEECCCchhhHHHHHHhhh
Confidence 89999999976433221 11 123456777777888899999999999998754321 1222211
Q ss_pred H---cCCeEEeecccccCCCC------------CCCCcccCChHHHHHHHHHHHHHHcCCCCCCeEEE--------EeeC
Q 022028 159 L---LGLRACLVQSTMDCGEG------------LPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIW--------FGIR 215 (304)
Q Consensus 159 ~---~gir~~~~~~~~d~g~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~--------~~~~ 215 (304)
. .+.+............. ..........++..+......+... ...... ..+.
T Consensus 65 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~ 140 (303)
T d3be7a2 65 RGVINGPTMLVSGPALGITGGHCDHNLLPPEFNYSSEGVVDSPWEARKMVRKNRKYGA----DLIKFCATGGVMSRNTDV 140 (303)
T ss_dssp TTSSCCCEEEECCSCBBCTTSTTSCCCSCTTTCCCCTTBCCSHHHHHHHHHHHHHTTC----SEEEEECBCCSSSSSCCT
T ss_pred hcccccccccccccccccccccccccccccccccccchhcCCHHHHHHHHHHHHhhhc----chhhhhhccccccccCCc
Confidence 1 12222222211111000 0001111223333333333332221 111111 1123
Q ss_pred cccCCCHHHHHHHHHHHHHhCCeeeEEecCChhhHHHHHHhcCCC--CCHHHHHHHhCCCCCCeeEEEeccCCcchhc
Q 022028 216 QIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVD--HGTVTFLDKIEFLQNNLLSAHTVWVNHTEVN 291 (304)
Q Consensus 216 ~~~~~~~e~l~~~~~~a~~~~~~~~~H~~E~~~~~~~~~~~~g~~--~~~~~~l~~~g~l~~~~~~~H~~~l~~~di~ 291 (304)
...........+..+.++..+.....|.................. ............+...+.+.|+.+..+.+..
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (303)
T d3be7a2 141 NAKQFTLEEMKAIVDEAHNHGMKVAAHAHGLIGIKAAIKAGVDSVEHASFIDDETIDMAIKNNTVLSMDIFVSDYILG 218 (303)
T ss_dssp TSBCSCHHHHHHHHHHHHHTTCEEEEEECSHHHHHHHHHHTCSEEEECTTCCHHHHHHHHHTTCEEECCCSTHHHHHT
T ss_pred cccchhhHHHHHHHHHHHHhCcchhhhhhhhhhHHHHHHHhhhhhhhhccchhhhhhhcccceeEEEecccchhhhhh
Confidence 345667888888999999999999999876655444433321100 0011111111223345678898888876665
|
| >d1i0da_ c.1.9.3 (A:) Phosphotriesterase (parathion hydrolase, PTE) {Pseudomonas diminuta [TaxId: 293]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: Metallo-dependent hydrolases family: Phosphotriesterase-like domain: Phosphotriesterase (parathion hydrolase, PTE) species: Pseudomonas diminuta [TaxId: 293]
Probab=98.26 E-value=6.2e-06 Score=69.22 Aligned_cols=178 Identities=12% Similarity=0.043 Sum_probs=92.3
Q ss_pred cccccCccchhhhhhcccCCCCccccccccccCccCCCChHHHHHHHHHHHHHHHhcCcceeecCCC----CCHHHHHHH
Q 022028 81 GFVNTHVHTSQQLAKGIADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGG----QHVSEMAKA 156 (304)
Q Consensus 81 G~ID~H~Hl~~s~~~g~~~~~~~~~~l~~~~~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~d~~~----~~~~~~~~~ 156 (304)
||||+|+|+........ .. ++. ..-..+.....+...+..+.+.|||+++++.. .....+.+.
T Consensus 16 G~~d~H~Hl~~~~~~~~------~~------~~~-~~~~~~~~~e~~~~~l~~a~~~GvttvVd~~~~~~~~d~~~l~~~ 82 (331)
T d1i0da_ 16 GFTLTHEHICGSSAGFL------RA------WPE-FFGSRKALAEKAVRGLRRARAAGVRTIVDVSTFDIGRDVSLLAEV 82 (331)
T ss_dssp CSEEEEECSEECCTTHH------HH------CGG-GGSCHHHHHHHHHHHHHHHHHTTCCEEEECCCGGGTCCHHHHHHH
T ss_pred CCEeeeeCcccCccccc------cc------Ccc-ccccHHHHHHHHHHHHHHHHHcCCCEEEEcCCCCCcCCHHHHHHH
Confidence 99999999975321100 00 000 00112344555666678888999999998753 345667777
Q ss_pred HHHcCCeEEeecccccCCCCCCCCcccCChHHHHHHHHHHHHHHcC-CCCCCeEEEEeeC-cccCCCHHHHHHHHHHHHH
Q 022028 157 VELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYAKHHH-AADGRIRIWFGIR-QIMNATDRLLLETRDMARE 234 (304)
Q Consensus 157 ~~~~gir~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~i~~~~~~~-~~~~~~~e~l~~~~~~a~~ 234 (304)
.++.+.+.+....+.-. .+........++........+..... .+.+....-.... .......+.+++..+.+++
T Consensus 83 ~~~~~~~~~~~~g~h~~---~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ 159 (331)
T d1i0da_ 83 SRAADVHIVAATGLWFD---PPLSMRLRSVEELTQFFLREIQYGIEDTGIRAGIIKVATTGKATPFQELVLKAAARASLA 159 (331)
T ss_dssp HHHHTCEEECEEECCSC---CCHHHHTCCHHHHHHHHHHHHHTCBTTTTBCCSEEEEECSSSCCHHHHHHHHHHHHHHHH
T ss_pred HHhcCCCEEEEEEEecC---cCcccCccCHHHHHHHHHHhhhhhhccccCccceeeccccccccHHHHHHHHHHHHHHHH
Confidence 88888887654433211 11111222233332222232332221 1111111111111 1111124457778889999
Q ss_pred hCCeeeEEecCChhhHHHHHHhcCCCCCHHHHHHHhCCCCCCeeEEEecc
Q 022028 235 FKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVW 284 (304)
Q Consensus 235 ~~~~~~~H~~E~~~~~~~~~~~~g~~~~~~~~l~~~g~l~~~~~~~H~~~ 284 (304)
.+.++.+|......+... ..+.+...+.....+.+.|+..
T Consensus 160 ~g~pv~~h~~~~~~~~~~----------~~~~~~~~~~~~~~~~i~H~~~ 199 (331)
T d1i0da_ 160 TGVPVTTHTAASQRDGEQ----------QAAIFESEGLSPSRVCIGHSDD 199 (331)
T ss_dssp HCCCEEEECCGGGTHHHH----------HHHHHHHTTCCGGGEEECSGGG
T ss_pred hCCeEEeeccchhhhhhh----------hhhhhhhcccCCcceEEEecCC
Confidence 999999998665544433 2334445555555666667654
|
| >d1bf6a_ c.1.9.3 (A:) Phosphotriesterase homology protein {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: Metallo-dependent hydrolases family: Phosphotriesterase-like domain: Phosphotriesterase homology protein species: Escherichia coli [TaxId: 562]
Probab=98.25 E-value=1.9e-06 Score=71.84 Aligned_cols=141 Identities=11% Similarity=0.046 Sum_probs=77.7
Q ss_pred HHHHHHHhcCcceeecCCC----CCHHHHHHHHHHcCCeEEeecccccCCCCCCCCcccCChHHHHHHHHHHHHHHcCCC
Q 022028 129 LCGIELIHSGVTCFAEAGG----QHVSEMAKAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAA 204 (304)
Q Consensus 129 ~~~~~~l~~GvTtv~d~~~----~~~~~~~~~~~~~gir~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (304)
..+.++...||+++++... .....+.+.+++.+++.+.+..+.... ..+........++..+...+.+.......
T Consensus 37 ~~l~~~~~~Gv~~iV~~t~~~~g~d~~~~~~la~~~~~~i~~~~G~hp~~-~~p~~~~~~~~~~~~~~~~~~i~~~~~~~ 115 (291)
T d1bf6a_ 37 QEMNDLMTRGVRNVIEMTNRYMGRNAQFMLDVMRETGINVVACTGYYQDA-FFPEHVATRSVQELAQEMVDEIEQGIDGT 115 (291)
T ss_dssp HHHHHHHHTTEEEEEECCCGGGTCCHHHHHHHHHHHCCEEEEEECCCCGG-GCCTHHHHSCHHHHHHHHHHHHHTCSTTS
T ss_pred HHHHHHHHcCCCEEEEcCCCccccCHHHHHHHHHHcCCCeeeeeeecCcc-cCCcccCcCCHHHHHHHHHHHHHHHHhcc
Confidence 3455677889999987642 345677788888998876554332111 01222222233343333444444433322
Q ss_pred CCCeEEEEeeCc--ccCCCH---HHHHHHHHHHHHhCCeeeEEecCChhhHHHHHHhcCCCCCHHHHHHHhCCCCCCeeE
Q 022028 205 DGRIRIWFGIRQ--IMNATD---RLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLS 279 (304)
Q Consensus 205 ~~~i~~~~~~~~--~~~~~~---e~l~~~~~~a~~~~~~~~~H~~E~~~~~~~~~~~~g~~~~~~~~l~~~g~l~~~~~~ 279 (304)
.... ..++..+ .+..++ +.+++..++|+++++++.+|........+ .++.+.+.|.-.++.++
T Consensus 116 ~~~~-~~IGe~g~d~~~~~~~q~~~f~~~~~~A~~~~lPv~iH~r~~~~~~e-----------~~~~l~~~~~~~~~~~~ 183 (291)
T d1bf6a_ 116 ELKA-GIIAEIGTSEGKITPLEEKVFIAAALAHNQTGRPISTHTSFSTMGLE-----------QLALLQAHGVDLSRVTV 183 (291)
T ss_dssp SCCE-EEEEEEECBTTBCCHHHHHHHHHHHHHHHHHCCCEEEECGGGCSHHH-----------HHHHHHHTTCCGGGEEE
T ss_pred CceE-EEEEeeccccCCCCHHHHHHHHHHHHHHHHhCCCeEEeccchhhhHH-----------HHHHHHHhCCCccccee
Confidence 2222 1222211 122333 35888899999999999999743222111 35566666765556677
Q ss_pred EEe
Q 022028 280 AHT 282 (304)
Q Consensus 280 ~H~ 282 (304)
.||
T Consensus 184 ~H~ 186 (291)
T d1bf6a_ 184 GHC 186 (291)
T ss_dssp CCC
T ss_pred ccc
Confidence 788
|
| >d1kcxa2 c.1.9.6 (A:67-400) Dihydropyrimidinase related protein-1 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: Metallo-dependent hydrolases family: Hydantoinase (dihydropyrimidinase), catalytic domain domain: Dihydropyrimidinase related protein-1 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=98.16 E-value=6.9e-06 Score=69.79 Aligned_cols=42 Identities=14% Similarity=0.243 Sum_probs=31.8
Q ss_pred CeEEEEeeCcccCCCHHHHHHHHHHHHHhCCeeeEEecCChhh
Q 022028 207 RIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYE 249 (304)
Q Consensus 207 ~i~~~~~~~~~~~~~~e~l~~~~~~a~~~~~~~~~H~~E~~~~ 249 (304)
.++++++.......++..+.++.+.+++.+..+.+|+ |..+-
T Consensus 97 ~~ki~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~H~-Ed~~l 138 (334)
T d1kcxa2 97 SFQVYMAYKDLYQMSDSQLYEAFTFLKGLGAVILVHA-ENGDL 138 (334)
T ss_dssp EEEEESCSTTTTCCCHHHHHHHHHHHHHTTCEEEEEC-CCHHH
T ss_pred eeeeeeccCCCcccCHHHHHHHHHHHhccCceeEEec-CCHHH
Confidence 3556555544456788889999999999999999996 66543
|
| >d2amxa1 c.1.9.1 (A:20-376) Adenosine deaminase (ADA) {Plasmodium yoelii [TaxId: 5861]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: Metallo-dependent hydrolases family: Adenosine/AMP deaminase domain: Adenosine deaminase (ADA) species: Plasmodium yoelii [TaxId: 5861]
Probab=98.06 E-value=1.3e-05 Score=68.60 Aligned_cols=157 Identities=17% Similarity=0.147 Sum_probs=84.0
Q ss_pred CCChHHHHHHHHHHHHHHHhcCcceeecCC---------CCCHH--------HHHHHHHHcCCeEEeecccc-cCCCCCC
Q 022028 117 NMTEEDSYISTLLCGIELIHSGVTCFAEAG---------GQHVS--------EMAKAVELLGLRACLVQSTM-DCGEGLP 178 (304)
Q Consensus 117 ~~~~e~~~~~~~~~~~~~l~~GvTtv~d~~---------~~~~~--------~~~~~~~~~gir~~~~~~~~-d~g~~~~ 178 (304)
..++++++..+...+.++.+.||..+--.. +...+ .+.++.+..|++..+...++ +.+
T Consensus 93 ~~~~e~~~~~~~~~~~~~~~~~v~y~Elr~~p~~~~~~~g~~~~~v~~~i~~g~~~a~~~~~~~~~~~l~~~~~~~---- 168 (357)
T d2amxa1 93 YRDYDFIEDLAKWAVIEKYKEGVVLMEFRYSPTFVSSSYGLDVELIHKAFIKGIKNATELLNNKIHVALICISDTG---- 168 (357)
T ss_dssp CCSHHHHHHHHHHHHHHHHHTTEEEEEEEECHHHHHHTTTCCHHHHHHHHHHHHHHHHHHTTTSSEEEEEEECCCC----
T ss_pred hcCHHHHHHHHHHHHHHHHHhcceeecccccccccccccCcchHHHHHHHHHHHHHHHHhcCCceEEEeeeccccc----
Confidence 345677777777888889999997762110 11112 22333344555443222221 111
Q ss_pred CCcccCChHHHHHHHHHHHHHHcCCCCCCeEEEEeeCcccCCCHHHHHHHHHHHHHhCCeeeEEecCChhhHHHHHHhcC
Q 022028 179 ASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRK 258 (304)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~e~l~~~~~~a~~~~~~~~~H~~E~~~~~~~~~~~~g 258 (304)
...+......++..... +.+ +++...+.....+ .+..+++.|++.|+++.+|+.|.....
T Consensus 169 ------~~~~~~~~~~~~a~~~~----~~v-vGidl~g~e~~~~-~~~~~f~~ar~~gl~it~HaGE~~~~~-------- 228 (357)
T d2amxa1 169 ------HAAASIKHSGDFAIKHK----HDF-VGFDHGGREIDLK-DHKDVYHSVRDHGLHLTVHAGEDATLP-------- 228 (357)
T ss_dssp ------CSHHHHHTTTHHHHHTT----TTE-EEEECCSSCCCCG-GGHHHHHHHHHTTCEEEEEESCCTTCS--------
T ss_pred ------chhhhHHHHHHHHHhcC----Cce-EeecccCCcccch-hhHHHHHHHHhcCCcccccccccCCCC--------
Confidence 11222233333333322 222 3555555443333 356789999999999999999964210
Q ss_pred CCCCHHHHHHHhCCCCCCeeEEEeccCCcch--hc-----------cccccccccc
Q 022028 259 VDHGTVTFLDKIEFLQNNLLSAHTVWVNHTE--VN-----------CTFGNFKYAV 301 (304)
Q Consensus 259 ~~~~~~~~l~~~g~l~~~~~~~H~~~l~~~d--i~-----------~p~sN~~l~~ 301 (304)
.+-...+....+++. =+.||+.+..++ ++ ||+||..++.
T Consensus 229 ---~~~~i~~ai~~l~~~-RIgHGv~~~~d~~l~~~l~~~~I~leiCPtSN~~~~~ 280 (357)
T d2amxa1 229 ---NLNTLYTAINILNVE-RIGHGIRVSESDELIELVKKKDILLEVCPISNLLLNN 280 (357)
T ss_dssp ---SSHHHHHHHHTSCCS-EEEECGGGGGCHHHHHHHHHHTCEEEECHHHHHHTTS
T ss_pred ---ChHHHHHHHHccCCc-ccccchheecCHHHHHHHHHhCceEEECCcchhhhcc
Confidence 011111122234433 379999995433 33 9999998864
|
| >d2ftwa2 c.1.9.6 (A:60-393) Dihydropyrimidine amidohydrolase Pyd2 {Dictyostelium discoideum [TaxId: 44689]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: Metallo-dependent hydrolases family: Hydantoinase (dihydropyrimidinase), catalytic domain domain: Dihydropyrimidine amidohydrolase Pyd2 species: Dictyostelium discoideum [TaxId: 44689]
Probab=98.03 E-value=1.9e-05 Score=66.97 Aligned_cols=41 Identities=12% Similarity=0.157 Sum_probs=29.6
Q ss_pred eEEEEeeCcccCCCHHHHHHHHHHHHHhCCeeeEEecCChhh
Q 022028 208 IRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYE 249 (304)
Q Consensus 208 i~~~~~~~~~~~~~~e~l~~~~~~a~~~~~~~~~H~~E~~~~ 249 (304)
++++.........+++.+..+++.+++.+..+.+|+ |...-
T Consensus 98 ~k~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~-E~~~~ 138 (334)
T d2ftwa2 98 FKCFMAYKNSFMVTDQEMYHIFKRCKELGAIAQVHA-ENGDM 138 (334)
T ss_dssp EEEESSCTTTTBCCHHHHHHHHHHHHHHTCEEEEEC-SCHHH
T ss_pred cceeeccccccccccHHHHHHHHHHhhcCCceeecc-hhHHH
Confidence 455544333345677888899999999999999996 55443
|
| >d2qs8a2 c.1.9.18 (A:64-373) Xaa-Pro dipeptidase {Alteromonas macleodii [TaxId: 28108]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: Metallo-dependent hydrolases family: Zn-dependent arginine carboxypeptidase-like domain: Xaa-Pro dipeptidase species: Alteromonas macleodii [TaxId: 28108]
Probab=98.00 E-value=3.8e-05 Score=62.35 Aligned_cols=53 Identities=21% Similarity=0.264 Sum_probs=38.3
Q ss_pred cccccCccchhhhhhcccCCCCccccccccccCccCCCChHHHHHHHHHHHHHHHhcCcceeecCCCC
Q 022028 81 GFVNTHVHTSQQLAKGIADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQ 148 (304)
Q Consensus 81 G~ID~H~Hl~~s~~~g~~~~~~~~~~l~~~~~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~d~~~~ 148 (304)
||||+|+|+..+..++...+ ..+.++.....+...+.++|++||||++|.++.
T Consensus 1 GlID~H~H~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~L~~GVTTv~d~~~~ 53 (310)
T d2qs8a2 1 GLMDMHVHFGQEYQSKAQAP---------------IKVEREMQAILATQHAYVTFKSGFTTVRQVGDS 53 (310)
T ss_dssp CEEEEEECTTCCCCCTTTSC---------------SCCCHHHHHHHHHHHHHHHHHTTEEEEEECCCS
T ss_pred CeEEeeeCCcccCCcccccc---------------cccCHHHHHHHHHHHHHHHHhCCceEEEECCCc
Confidence 89999999987554332211 224456666667777889999999999998754
|
| >d2icsa2 c.1.9.14 (A:55-321) Putative adenine deaminase EF0837 {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: Metallo-dependent hydrolases family: Adenine deaminase-like domain: Putative adenine deaminase EF0837 species: Enterococcus faecalis [TaxId: 1351]
Probab=97.94 E-value=1e-05 Score=64.22 Aligned_cols=118 Identities=11% Similarity=0.001 Sum_probs=59.3
Q ss_pred HHHhcCcceeecCCCC---CHHHHHHHHHHcCCeEEeecccccCCCCCCCCcccCChHHHHHHHHHHHHHHcCCCCCCeE
Q 022028 133 ELIHSGVTCFAEAGGQ---HVSEMAKAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIR 209 (304)
Q Consensus 133 ~~l~~GvTtv~d~~~~---~~~~~~~~~~~~gir~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 209 (304)
.++++||||++|++.. ..+...+..+....+..........+... ............+......+... +.++
T Consensus 23 ~~l~~GvTTv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~----~~~~ 97 (267)
T d2icsa2 23 IGVKKGVTTVIDAGTTGAENIHEFYDLAQQAKTNVFGLVNISKWGIVA-QDELADLSKVQASLVKKAIQELP----DFVV 97 (267)
T ss_dssp HTGGGTEEEEEEESSSCTTTHHHHHHHHHTSSSEEEEEEESSTTTTSS-SCTTSSGGGCCHHHHHHHHHHCT----TTEE
T ss_pred HHhCCeeEEEECCCCCChhHHHHHHHHHHhhhcchhhccccccccccc-ccccCChhhcCHHHHHHHHhhhh----hhhh
Confidence 3688999999987643 34556666676666654333322221111 11100001111122334444432 3333
Q ss_pred EEEee-C--c-ccCCCHHHHHHHHHHHHHhCCeeeEEecCChhhHHHHHH
Q 022028 210 IWFGI-R--Q-IMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMD 255 (304)
Q Consensus 210 ~~~~~-~--~-~~~~~~e~l~~~~~~a~~~~~~~~~H~~E~~~~~~~~~~ 255 (304)
..... . . ......+........++..++.+..|.............
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~ 147 (267)
T d2icsa2 98 GIKARMSRTVIGDNGITPLELAKQIQQENQEIPLMVHIGSAPPHLDEILA 147 (267)
T ss_dssp EEEEEESHHHHTTCTTHHHHHHHHHHHTTTTCCEEEEECSSSSCHHHHHH
T ss_pred hhhhhhcccccccCCcHHHHHHHHHHHHhcccceeeecccchhHHHHHHh
Confidence 22221 1 1 222344555555556666899999999887766655544
|
| >d1ynya2 c.1.9.6 (A:53-384) D-hydantoinase {Bacillus sp. AR9 [TaxId: 301298]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: Metallo-dependent hydrolases family: Hydantoinase (dihydropyrimidinase), catalytic domain domain: D-hydantoinase species: Bacillus sp. AR9 [TaxId: 301298]
Probab=97.79 E-value=6.6e-05 Score=63.46 Aligned_cols=42 Identities=19% Similarity=0.356 Sum_probs=31.3
Q ss_pred CCeEEEEeeCcccCCCHHHHHHHHHHHHHhCCeeeEEecCChh
Q 022028 206 GRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPY 248 (304)
Q Consensus 206 ~~i~~~~~~~~~~~~~~e~l~~~~~~a~~~~~~~~~H~~E~~~ 248 (304)
..++++.........+.+.+.++++.+++.++.+.+|. |...
T Consensus 95 ~~~k~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~h~-Ed~~ 136 (332)
T d1ynya2 95 TSLKVFMAYKNVFQADDETLFKTLVKAKELGALVQVHA-ENGD 136 (332)
T ss_dssp CEEEEESCSTTTTCCCHHHHHHHHHHHHHHTCEEEEEC-SCHH
T ss_pred cceeeeeccccccccCHHHHHHHHHHHhhcCCEEeech-hhHH
Confidence 44566555444455678889999999999999999995 6544
|
| >d2r8ca2 c.1.9.18 (A:58-368) Uncharacterized protein EAJ56179 {Unidentified organism [TaxId: 32644]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: Metallo-dependent hydrolases family: Zn-dependent arginine carboxypeptidase-like domain: Uncharacterized protein EAJ56179 species: Unidentified organism [TaxId: 32644]
Probab=97.76 E-value=6.2e-05 Score=61.13 Aligned_cols=53 Identities=17% Similarity=0.241 Sum_probs=36.9
Q ss_pred cccccCccchhhhhhcccCCCCccccccccccCccCCCChHHHHHHHHHHHHHHHhcCcceeecCCCCC
Q 022028 81 GFVNTHVHTSQQLAKGIADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQH 149 (304)
Q Consensus 81 G~ID~H~Hl~~s~~~g~~~~~~~~~~l~~~~~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~d~~~~~ 149 (304)
||||+|+|+....... ... ..+.+++....+...+.++|++||||++|+++..
T Consensus 1 GLID~H~H~~~~~~~~-----~~~-----------~~~~~~~~~~~~~~~~~~~L~~GVTTv~d~g~~~ 53 (311)
T d2r8ca2 1 GLIDLHVHVVAIEFNL-----PRV-----------ATLPNVLVTLRAVPIMRAMLRRGFTTVRDAGGAG 53 (311)
T ss_dssp CEEEEEECTTCCSSCH-----HHH-----------HHSCHHHHHHHHHHHHHHHHHTTEEEEEECSSCC
T ss_pred CeEEcccCcCCCCCCh-----hhh-----------hcCCHHHHHHHHHHHHHHHHhCCccEEEeCCCch
Confidence 8999999986532110 000 1234566677777888999999999999998643
|
| >d1m7ja3 c.1.9.11 (A:62-419) N-acyl-D-aminoacid amidohydrolase, catalytic domain {Alcaligenes faecalis [TaxId: 511]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: Metallo-dependent hydrolases family: D-aminoacylase, catalytic domain domain: N-acyl-D-aminoacid amidohydrolase, catalytic domain species: Alcaligenes faecalis [TaxId: 511]
Probab=97.72 E-value=7.5e-05 Score=63.75 Aligned_cols=89 Identities=17% Similarity=0.091 Sum_probs=52.6
Q ss_pred hHHHHHHHHHHHHHHcCCCCCCeEEEEeeCcccC--CCHHHHHHHHHHHHHhCCeeeEEecCCh-hhHHHHHHhcCCCCC
Q 022028 186 TDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMN--ATDRLLLETRDMAREFKTGIHMHVAEIP-YENQVVMDTRKVDHG 262 (304)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~--~~~e~l~~~~~~a~~~~~~~~~H~~E~~-~~~~~~~~~~g~~~~ 262 (304)
.++-++.-.+++++..+. |-+.+..+....++ .+.+++.++.+.+.++|..+..|+.... ...+...+
T Consensus 103 t~~ei~~M~~ll~eal~~--GA~G~Stgl~y~P~~~A~~~El~~lak~~~~~g~~~~~h~r~~~~~~~~~~~e------- 173 (358)
T d1m7ja3 103 TADEIQAMQALADDALAS--GAIGISTGAFYPPAAHASTEEIIEVCRPLITHGGVYATHMRDEGEHIVQALEE------- 173 (358)
T ss_dssp CHHHHHHHHHHHHHHHHH--TCCEEEEETTSGGGTTCCHHHHHHHHTHHHHHTCEEEEECSCSSTTHHHHHHH-------
T ss_pred CHHHHHHHHHHHHHHHhc--CCcccccCCcccccccCCHHHHHHHHHHHHhcCCeeeeeeccccccHHHHHHH-------
Confidence 345555556666665543 44444443332332 4677777899999999999999985443 33333333
Q ss_pred HHHHHHHhCCCCCCeeEEEeccCC
Q 022028 263 TVTFLDKIEFLQNNLLSAHTVWVN 286 (304)
Q Consensus 263 ~~~~l~~~g~l~~~~~~~H~~~l~ 286 (304)
.++..++.|+ .+.+.|.....
T Consensus 174 ~~~~a~~~g~---~~~ish~~~~~ 194 (358)
T d1m7ja3 174 TFRIGRELDV---PVVISHHKVMG 194 (358)
T ss_dssp HHHHHHHHTS---CEEECSCCCCS
T ss_pred HHHHHHHcCC---ceEecccccCC
Confidence 3455556666 56666655544
|
| >d2q09a1 b.92.1.10 (A:4-65,A:367-407) Probable 4-imidazolone-5-propanoate amidohydrolase GOS_1928421 {Environmental samples} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Composite domain of metallo-dependent hydrolases superfamily: Composite domain of metallo-dependent hydrolases family: Imidazolonepropionase-like domain: Probable 4-imidazolone-5-propanoate amidohydrolase GOS 1928421 species: Environmental samples
Probab=97.56 E-value=4.2e-05 Score=52.05 Aligned_cols=57 Identities=14% Similarity=0.191 Sum_probs=45.0
Q ss_pred cEEEEccEEEecCCC---CceeeeeeEEEeCCEEEEecCChhhhhhhcCCCceEEeCCCCEee
Q 022028 20 TMILHNAVIVTMDKE---SRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILL 79 (304)
Q Consensus 20 ~~li~~~~ii~~~~~---~~~~~~~~I~I~~g~I~~i~~~~~~~~~~~~~~~~vID~~g~iv~ 79 (304)
+.+.+|+++-|+++. -..++++.|.|++|||.+|+|..+.+.. .++.+.|++|+++.
T Consensus 3 d~lw~n~~lATm~~~~~~yG~ie~~ai~v~~g~I~~vgp~~~lpa~---~~~~~~d~~gr~~t 62 (103)
T d2q09a1 3 ERVWLNVTPATLRSDLADYGLLEPHALGVHEGRIHALVPMQDLKGP---YPAHWQDMKGKLVT 62 (103)
T ss_dssp SEEEEEEEEBCCCTTSSTTCBCSSEEEEEETTEEEEEEEGGGCC-----CCTTSEECTTCEEE
T ss_pred ceeeecCEEEEecCCCCCcceeccceEEEeCCeEEEEEehhhCCcc---ccchhhhcccceEE
Confidence 567899999999865 5678999999999999999998776432 23467899998753
|
| >d4ubpc2 c.1.9.2 (C:132-434,C:484-570) alpha-subunit of urease, catalytic domain {Bacillus pasteurii [TaxId: 1474]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: Metallo-dependent hydrolases family: alpha-subunit of urease, catalytic domain domain: alpha-subunit of urease, catalytic domain species: Bacillus pasteurii [TaxId: 1474]
Probab=97.56 E-value=0.00019 Score=59.18 Aligned_cols=93 Identities=19% Similarity=0.234 Sum_probs=61.9
Q ss_pred HHHhcCcceeecCC---------------CCCHHHHHHHHHHcCCeEEeecccccCCCCCCCCcccCChHHHHHHHHHHH
Q 022028 133 ELIHSGVTCFAEAG---------------GQHVSEMAKAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELY 197 (304)
Q Consensus 133 ~~l~~GvTtv~d~~---------------~~~~~~~~~~~~~~gir~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~~~ 197 (304)
++|.+|+||+..-+ .++...++++++...+..-+. ..|... .. ...++.+
T Consensus 17 ~al~sGiTT~~GgGtGpa~gt~att~tpG~~~i~~ml~a~d~~P~N~g~~----gkGn~s--------~~---~~l~eqi 81 (390)
T d4ubpc2 17 VALANGITTLFGGGTGPAEGSKATTVTPGPWNIEKMLKSTEGLPINVGIL----GKGHGS--------SI---APIMEQI 81 (390)
T ss_dssp HHHHTTEEEEEEECCSSCHHHHHSSCCCHHHHHHHHHHHHTTCSSEEEEE----EECCCS--------SH---HHHHHHH
T ss_pred HHHhcCCeeeecCccCCCCCCCCcccCCCHHHHHHHHHhhhhCCcceeee----eccccC--------Ch---HHHHHHH
Confidence 47899999996421 134667889988888876321 122110 11 1233334
Q ss_pred HHHcCCCCCCeEEEEeeCcccCCCHHHHHHHHHHHHHhCCeeeEE---ecCChh
Q 022028 198 AKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMH---VAEIPY 248 (304)
Q Consensus 198 ~~~~~~~~~~i~~~~~~~~~~~~~~e~l~~~~~~a~~~~~~~~~H---~~E~~~ 248 (304)
+. |- .++..|--|.+++..++.++.+|.++++.+.+| ++|...
T Consensus 82 ~a------Ga--~GlKiHEDwGatpa~id~~L~vad~~dvqv~iHtDtlNE~gf 127 (390)
T d4ubpc2 82 DA------GA--AGLKIHEDWGATPASIDRSLTVADEADVQVAIHSDTLNEAGF 127 (390)
T ss_dssp HH------TC--CEEEEEGGGCCCHHHHHHHHHHHHHHTCEEEEECCTTCSSCC
T ss_pred Hh------hh--heeecccccccCHHHHHHHHHHhhccCceEEEecCCccccee
Confidence 33 11 256677789999999999999999999999999 445543
|
| >d1nfga2 c.1.9.6 (A:52-381) D-hydantoinase {Burkholderia pickettii [TaxId: 329]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: Metallo-dependent hydrolases family: Hydantoinase (dihydropyrimidinase), catalytic domain domain: D-hydantoinase species: Burkholderia pickettii [TaxId: 329]
Probab=97.50 E-value=0.00015 Score=61.15 Aligned_cols=42 Identities=21% Similarity=0.225 Sum_probs=30.9
Q ss_pred CeEEEEeeCcccCCCHHHHHHHHHHHHHhCCeeeEEecCChhh
Q 022028 207 RIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYE 249 (304)
Q Consensus 207 ~i~~~~~~~~~~~~~~e~l~~~~~~a~~~~~~~~~H~~E~~~~ 249 (304)
.++++++.......+...+.++++.+++.+..+.+|+ |....
T Consensus 95 ~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~-E~~~~ 136 (330)
T d1nfga2 95 SFKVFMAYRGMNMIDDVTLLKTLDKAVKTGSLVMVHA-ENGDA 136 (330)
T ss_dssp EEEEESSSTTTTBCCHHHHHHHHHHHHHHTCEEEEEC-CCHHH
T ss_pred ceeeeccccccCCCCcHHHHHHHHHHHhcCCceeech-HHHHH
Confidence 3556655544445677888889999999999999995 66543
|
| >d1gkpa2 c.1.9.6 (A:55-389) D-hydantoinase {Thermus sp. [TaxId: 275]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: Metallo-dependent hydrolases family: Hydantoinase (dihydropyrimidinase), catalytic domain domain: D-hydantoinase species: Thermus sp. [TaxId: 275]
Probab=97.42 E-value=0.00026 Score=59.73 Aligned_cols=41 Identities=17% Similarity=0.319 Sum_probs=32.3
Q ss_pred CeEEEEeeCcccCCCHHHHHHHHHHHHHhCCeeeEEecCChh
Q 022028 207 RIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPY 248 (304)
Q Consensus 207 ~i~~~~~~~~~~~~~~e~l~~~~~~a~~~~~~~~~H~~E~~~ 248 (304)
.+++.+........++..+.++++.+++.+..+.+|. |...
T Consensus 94 ~~k~~~~~~~~~~~d~~~l~~~~~~~~~~~~~v~~h~-ed~~ 134 (335)
T d1gkpa2 94 SFKIFLSYKNFFGVDDGEMYQTLRLAKELGVIVTAHC-ENAE 134 (335)
T ss_dssp EEEEEECSTTTTBCCHHHHHHHHHHHHHHTCEEEEEE-SCHH
T ss_pred ccccccccCCCccCCHHHHHHHHHHhhhcCCEEEEcC-CcHH
Confidence 4566666655566789999999999999999999997 5543
|
| >d2fvka2 c.1.9.6 (A:57-440) Dihydropyrimidine amidohydrolase Pyd2 {Yeast (Saccharomyces kluyveri) [TaxId: 4934]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: Metallo-dependent hydrolases family: Hydantoinase (dihydropyrimidinase), catalytic domain domain: Dihydropyrimidine amidohydrolase Pyd2 species: Yeast (Saccharomyces kluyveri) [TaxId: 4934]
Probab=97.42 E-value=0.00016 Score=62.25 Aligned_cols=43 Identities=9% Similarity=0.108 Sum_probs=29.8
Q ss_pred CeEEEEeeCcccCCCHHHHHHHHHHHHHhCCeeeEEecCChhhHH
Q 022028 207 RIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQ 251 (304)
Q Consensus 207 ~i~~~~~~~~~~~~~~e~l~~~~~~a~~~~~~~~~H~~E~~~~~~ 251 (304)
.+++++.... ...+.+.+.++++.+++.|..+.+|+ |......
T Consensus 109 ~~k~f~~~~~-~~~~~~~l~~~l~~~~~~g~~v~~H~-Ed~~~~~ 151 (384)
T d2fvka2 109 SVKMFMTYPG-LQISDYDIMSAMYATRKNGFTTMLHA-ENGDMVK 151 (384)
T ss_dssp EEEEESSSTT-TBCCHHHHHHHHHHHHHTTCEEEEEC-CCHHHHH
T ss_pred ccceeccccc-cccCHHHHHHHHHHHHhcCCceeecc-ccHHHHH
Confidence 3454443322 34677778889999999999999995 7655443
|
| >d1ejxc2 c.1.9.2 (C:1130-1422,C:1476-1567) alpha-subunit of urease, catalytic domain {Klebsiella aerogenes [TaxId: 28451]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: Metallo-dependent hydrolases family: alpha-subunit of urease, catalytic domain domain: alpha-subunit of urease, catalytic domain species: Klebsiella aerogenes [TaxId: 28451]
Probab=97.29 E-value=0.00065 Score=56.00 Aligned_cols=93 Identities=26% Similarity=0.260 Sum_probs=61.0
Q ss_pred HHHhcCcceeecCC---------------CCCHHHHHHHHHHcCCeEEeecccccCCCCCCCCcccCChHHHHHHHHHHH
Q 022028 133 ELIHSGVTCFAEAG---------------GQHVSEMAKAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELY 197 (304)
Q Consensus 133 ~~l~~GvTtv~d~~---------------~~~~~~~~~~~~~~gir~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~~~ 197 (304)
++|.+|+||+..-+ .++...++++++...+..-+. ..|... ..+ ..++.+
T Consensus 16 ~al~sGiTT~iGgGtGPa~Gt~att~tpg~~~~~~ml~a~d~~P~N~g~~----gkGn~s--------~~~---~l~eqi 80 (385)
T d1ejxc2 16 EALVSGVTTMVGGGTGPAAGTHATTCTPGPWYISRMLQAADSLPVNIGLL----GKGNVS--------QPD---ALREQV 80 (385)
T ss_dssp HHHHTTEEEEEEECCSSSHHHHHSSCCCHHHHHHHHHHHHTTSSSEEEEE----EECCCS--------SHH---HHHHHH
T ss_pred HHHhcCCeeeecCccCCCCCCCCcCcCCCHHHHHHHHHhhhhCCcceeee----eccccC--------ChH---HHHHHH
Confidence 47899999996422 134667889988888876321 122110 111 123333
Q ss_pred HHHcCCCCCCeEEEEeeCcccCCCHHHHHHHHHHHHHhCCeeeEEecCChhh
Q 022028 198 AKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYE 249 (304)
Q Consensus 198 ~~~~~~~~~~i~~~~~~~~~~~~~~e~l~~~~~~a~~~~~~~~~H~~E~~~~ 249 (304)
+. |- .++..|-.|..++..++.++.+|.++++.+.+|- ++.+|
T Consensus 81 ~A------Ga--~GlKiHEDwGatpa~id~~L~vad~~dvqv~iHt-DtlNE 123 (385)
T d1ejxc2 81 AA------GV--IGLKIHEDWGATPAAIDCALTVADEMDIQVALHS-DTLNE 123 (385)
T ss_dssp HH------TC--SEEEEEGGGCCCHHHHHHHHHHHHHHTCEEEEEC-CTTCS
T ss_pred Hh------hh--ceecCCcccccChHHHHHHHHhHhhcCceEEEec-ccccc
Confidence 33 11 2456677899999999999999999999999994 44433
|
| >d1e9yb2 c.1.9.2 (B:132-431,B:481-569) alpha-subunit of urease, catalytic domain {Helicobacter pylori [TaxId: 210]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: Metallo-dependent hydrolases family: alpha-subunit of urease, catalytic domain domain: alpha-subunit of urease, catalytic domain species: Helicobacter pylori [TaxId: 210]
Probab=97.28 E-value=0.00055 Score=56.41 Aligned_cols=92 Identities=20% Similarity=0.260 Sum_probs=61.2
Q ss_pred HHHhcCcceeecCC---------------CCCHHHHHHHHHHcCCeEEeecccccCCCCCCCCcccCChHHHHHHHHHHH
Q 022028 133 ELIHSGVTCFAEAG---------------GQHVSEMAKAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELY 197 (304)
Q Consensus 133 ~~l~~GvTtv~d~~---------------~~~~~~~~~~~~~~gir~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~~~ 197 (304)
++|.+|+||+..-+ .++...++++++...+..-+. ..|.... + + ..++.+
T Consensus 16 ~al~sGiTT~iGgGtGPa~Gt~att~tpg~~~i~~ml~a~d~~P~N~g~~----gkGn~s~-------~-~---~l~eqi 80 (389)
T d1e9yb2 16 TAFASGVTTMIGGGTGPADGTNATTITPGRRNLKWMLRAAEEYSMNLGFL----AKGNASN-------D-A---SLADQI 80 (389)
T ss_dssp HHHHTTEEEEEEECCSSCHHHHHCCCCCHHHHHHHHHHHHTTSSSEEEEE----EECCCSC-------H-H---HHHHHH
T ss_pred HHHhcCCeEEecCccCCCCCCCccccCCChhHHHHHHHhhhcCCcceeee----eccCCCC-------h-H---HHHHHH
Confidence 47899999996422 134667889988888876321 1221110 1 1 123333
Q ss_pred HHHcCCCCCCeEEEEeeCcccCCCHHHHHHHHHHHHHhCCeeeEEecCChh
Q 022028 198 AKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPY 248 (304)
Q Consensus 198 ~~~~~~~~~~i~~~~~~~~~~~~~~e~l~~~~~~a~~~~~~~~~H~~E~~~ 248 (304)
+. |- .++..|--|..++..++.++.+|.++++.+.+|- ++.+
T Consensus 81 ~a------Ga--~GlKiHEDwGatp~~Id~~L~vad~~dvqv~iHt-DtlN 122 (389)
T d1e9yb2 81 EA------GA--IGFKIHEDWGTTPSAINHALDVADKYDVQVAIHT-DTLN 122 (389)
T ss_dssp HT------TC--SEEEECGGGCCCHHHHHHHHHHHHHTTCEEEECC-CTTC
T ss_pred Hh------cc--ceeeccccccCCHHHHHHHHHHHHhhCceEEecC-CCcc
Confidence 32 21 3567788899999999999999999999999994 3443
|
| >d1a4ma_ c.1.9.1 (A:) Adenosine deaminase (ADA) {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: Metallo-dependent hydrolases family: Adenosine/AMP deaminase domain: Adenosine deaminase (ADA) species: Mouse (Mus musculus) [TaxId: 10090]
Probab=97.23 E-value=0.00082 Score=56.87 Aligned_cols=62 Identities=18% Similarity=0.225 Sum_probs=42.4
Q ss_pred HHHHHHHHHHhCCeeeEEecCChhhHHHHHHhcCCCCCHHHHHHHhCCCCCCeeEEEeccCCcchh--c-----------
Q 022028 225 LLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEV--N----------- 291 (304)
Q Consensus 225 l~~~~~~a~~~~~~~~~H~~E~~~~~~~~~~~~g~~~~~~~~l~~~g~l~~~~~~~H~~~l~~~di--~----------- 291 (304)
+..+++.|++.|+++.+|+.|....... .+-+. .++++ =+.||+.+.++.- +
T Consensus 194 ~~~~f~~ar~~gl~~t~HaGE~~~~~~i-----------~~ai~---~l~~~-RIGHG~~l~~d~~l~~~~~~~~I~lEv 258 (349)
T d1a4ma_ 194 HVEAYEGAVKNGIHRTVHAGEVGSPEVV-----------REAVD---ILKTE-RVGHGYHTIEDEALYNRLLKENMHFEV 258 (349)
T ss_dssp HHHHHHHHHHHTCEEEEEESSSSCHHHH-----------HHHHH---TSCCS-EEEECGGGGGSHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHHHcCCceeeccCCCCChHHH-----------HHHHH---HhCCc-ccCCceecccCHHHHHHhhhcCceEEE
Confidence 5568899999999999999998653321 11111 23333 4889999954322 2
Q ss_pred cccccccccc
Q 022028 292 CTFGNFKYAV 301 (304)
Q Consensus 292 ~p~sN~~l~~ 301 (304)
||.||..++.
T Consensus 259 CptSN~~~~~ 268 (349)
T d1a4ma_ 259 CPWSSYLTGA 268 (349)
T ss_dssp CHHHHHHSSS
T ss_pred cccccccccc
Confidence 9999988754
|
| >d1zzma1 c.1.9.12 (A:1-259) Putative deoxyribonuclease YjjV {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: Metallo-dependent hydrolases family: TatD Mg-dependent DNase-like domain: Putative deoxyribonuclease YjjV species: Escherichia coli [TaxId: 562]
Probab=97.20 E-value=0.0011 Score=53.58 Aligned_cols=54 Identities=13% Similarity=0.114 Sum_probs=35.5
Q ss_pred HHHHHHHHHHHHhCCeeeEEecCChhhHHHHHHhcCCCCCHHHHHHHhCCCCCCeeEEEeccCCcchhc
Q 022028 223 RLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEVN 291 (304)
Q Consensus 223 e~l~~~~~~a~~~~~~~~~H~~E~~~~~~~~~~~~g~~~~~~~~l~~~g~l~~~~~~~H~~~l~~~di~ 291 (304)
+.+++-.++|+++++++.+|.-....+. ++.+.+.+.. +..+.||..-+.+..+
T Consensus 114 ~~f~~ql~lA~~~~~Pv~IH~r~a~~~~-------------~~~l~~~~~~--~~~i~H~f~g~~~~~~ 167 (259)
T d1zzma1 114 WLLDEQLKLAKRYDLPVILHSRRTHDKL-------------AMHLKRHDLP--RTGVVHGFSGSLQQAE 167 (259)
T ss_dssp HHHHHHHHHHHHTTCCEEEEEESCHHHH-------------HHHHHHHCCT--TCEEETTCCSCHHHHH
T ss_pred HHHHHHHHHHHHhccchhhhhHHHHHHH-------------HHhhhccccc--cceeeecccCCHHHHH
Confidence 4677889999999999999987665442 3344444332 2345677666655554
|
| >d1o12a1 b.92.1.5 (A:1-43,A:332-364) N-acetylglucosamine-6-phosphate deacetylase, NagA {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Composite domain of metallo-dependent hydrolases superfamily: Composite domain of metallo-dependent hydrolases family: N-acetylglucosamine-6-phosphate deacetylase, NagA domain: N-acetylglucosamine-6-phosphate deacetylase, NagA species: Thermotoga maritima [TaxId: 2336]
Probab=97.09 E-value=0.0008 Score=41.00 Aligned_cols=53 Identities=17% Similarity=0.194 Sum_probs=39.5
Q ss_pred EEEEccEEEecCCCCceeeeeeEEEeCCEEEEecCChhhhhhhcCCCceEEeCCCCEeeccccccCccch
Q 022028 21 MILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTS 90 (304)
Q Consensus 21 ~li~~~~ii~~~~~~~~~~~~~I~I~~g~I~~i~~~~~~~~~~~~~~~~vID~~g~iv~PG~ID~H~Hl~ 90 (304)
+++.++.|+++-+ .- -.|+|.+++|+|..|....- . ...++||||+|.|.|-.
T Consensus 1 M~iE~VLIVDPid--GE-yTGdvEf~e~kI~~I~k~ec---------t-----p~~ilMP~f~dg~~a~~ 53 (76)
T d1o12a1 1 MIVEKVLIVDPID--GE-FTGDVEIEEGKIVKVEKREC---------I-----PRGVLMPRIAEGTRADL 53 (76)
T ss_dssp CEEEEEEEEETTT--EE-EEEEEEEETTEEEEEEECCS---------C-----CSSEEEECCSTTSBCCE
T ss_pred CceeeEEEEcCCC--Cc-EeeeEEecCcEEEEEEEecc---------C-----CCeEEcccccCCccccE
Confidence 4678888997542 23 36899999999999976431 0 14699999999999964
|
| >d1gkra2 c.1.9.6 (A:55-379) L-hydantoinase {Arthrobacter aurescens [TaxId: 43663]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: Metallo-dependent hydrolases family: Hydantoinase (dihydropyrimidinase), catalytic domain domain: L-hydantoinase species: Arthrobacter aurescens [TaxId: 43663]
Probab=96.93 E-value=0.0011 Score=55.47 Aligned_cols=29 Identities=21% Similarity=0.116 Sum_probs=23.3
Q ss_pred CCCHHHHHHHHHHHHHhCCeeeEEecCChh
Q 022028 219 NATDRLLLETRDMAREFKTGIHMHVAEIPY 248 (304)
Q Consensus 219 ~~~~e~l~~~~~~a~~~~~~~~~H~~E~~~ 248 (304)
..++..+.++++.+++.+..+.+|. |...
T Consensus 106 ~~~d~~l~~~~~~~~~~~~~~~~H~-E~~~ 134 (325)
T d1gkra2 106 AVSDGELFEIFQEIAACGSVIVVHA-ENET 134 (325)
T ss_dssp BCCHHHHHHHHHHHHHHTCEEEEEC-CCHH
T ss_pred cccHHHHHHHHHHHHhcCCceEecc-CcHH
Confidence 4567778889999999999999995 6654
|
| >d1j6oa_ c.1.9.12 (A:) Hypothetical protein TM0667 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: Metallo-dependent hydrolases family: TatD Mg-dependent DNase-like domain: Hypothetical protein TM0667 species: Thermotoga maritima [TaxId: 2336]
Probab=96.89 E-value=0.00017 Score=58.63 Aligned_cols=55 Identities=13% Similarity=0.170 Sum_probs=39.3
Q ss_pred HHHHHHHHHHHHhCCeeeEEecCChhhHHHHHHhcCCCCCHHHHHHHhCCCCCCeeEEEeccCCcchhc
Q 022028 223 RLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEVN 291 (304)
Q Consensus 223 e~l~~~~~~a~~~~~~~~~H~~E~~~~~~~~~~~~g~~~~~~~~l~~~g~l~~~~~~~H~~~l~~~di~ 291 (304)
+.+++-+++|+++++++.+|+-....+ .++.+.+.+.-..+ .+.||..-+.+..+
T Consensus 112 ~vF~~ql~lA~~~~lPviiH~r~a~~~-------------~~~il~~~~~~~~~-~i~H~fsG~~~~~~ 166 (260)
T d1j6oa_ 112 RVFVEQIELAGKLNLPLVVHIRDAYSE-------------AYEILRTESLPEKR-GVIHAFSSDYEWAK 166 (260)
T ss_dssp HHHHHHHHHHHHHTCCEEEEEESCHHH-------------HHHHHHHSCCCSSC-EEETTCCSCHHHHH
T ss_pred HHHHHHHHHHHhcCcceEEeeccchHH-------------HHHHHHhhcCCCCC-eeeeccccCHHHHH
Confidence 457888999999999999999776544 34555555443223 67788887776655
|
| >d1yrra2 c.1.9.10 (A:54-350) N-acetylglucosamine-6-phosphate deacetylase, NagA, catalytic domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: Metallo-dependent hydrolases family: N-acetylglucosamine-6-phosphate deacetylase, NagA, catalytic domain domain: N-acetylglucosamine-6-phosphate deacetylase, NagA, catalytic domain species: Escherichia coli [TaxId: 562]
Probab=96.88 E-value=0.00015 Score=58.22 Aligned_cols=45 Identities=13% Similarity=0.187 Sum_probs=27.1
Q ss_pred cccccCccchhhhhhcccCCCCccccccccccCccCCCChHHHHHHHHHHHHHHHhcCcceeecC
Q 022028 81 GFVNTHVHTSQQLAKGIADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEA 145 (304)
Q Consensus 81 G~ID~H~Hl~~s~~~g~~~~~~~~~~l~~~~~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~d~ 145 (304)
||||+|+|+.... ++.+|. ...+++.+. ...++++++||||+++.
T Consensus 1 GlID~H~H~~~g~--------~~~~~~--------~~~~~~~~~----~~~~~~l~~GvTtv~~~ 45 (297)
T d1yrra2 1 GFIDVQLNGCGGV--------QFNDTA--------EAVSVETLE----IMQKANEKSGCTNYLPT 45 (297)
T ss_dssp CEEEEEESEETTE--------ESSSST--------TTSSHHHHH----HHHHHHHHTTEEEEEEE
T ss_pred CEEeHhhCCcCCC--------CCCCCc--------ccCCHHHHH----HHHHHHHccCeEEEeCC
Confidence 8999999986521 111111 123343322 33567899999999874
|
| >d1xrta2 c.1.9.6 (A:56-365) Two-domain dihydroorotase {Aquifex aeolicus [TaxId: 63363]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: Metallo-dependent hydrolases family: Hydantoinase (dihydropyrimidinase), catalytic domain domain: Two-domain dihydroorotase species: Aquifex aeolicus [TaxId: 63363]
Probab=96.88 E-value=0.0042 Score=51.29 Aligned_cols=56 Identities=13% Similarity=0.167 Sum_probs=27.0
Q ss_pred HHHHHHHHHHHhCCeeeE-EecCChhhHHHHHHhcCCCCCHHHHHHHhCCCCCCeeEEEeccCCcchhc
Q 022028 224 LLLETRDMAREFKTGIHM-HVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEVN 291 (304)
Q Consensus 224 ~l~~~~~~a~~~~~~~~~-H~~E~~~~~~~~~~~~g~~~~~~~~l~~~g~l~~~~~~~H~~~l~~~di~ 291 (304)
.+.....+++..+.++++ |+ -+....+ .++...+.|+----.++.|...++++++.
T Consensus 158 ai~r~~~la~~~~~~~~i~Hi-St~~~l~-----------~i~~a~~~g~~vt~e~~ph~L~l~~~~~~ 214 (310)
T d1xrta2 158 QIARDGILAQRTGGHVHIQHV-STKLSLE-----------IIEFFKEKGVKITCEVNPNHLLFTEREVL 214 (310)
T ss_dssp HHHHHHHHHHHHCCEEEESCC-CSHHHHH-----------HHHHHHHTTCCEEEEECGGGGC-------
T ss_pred HHHHHHHHHhhcCCeeecccc-chHHHHH-----------HHHHHHHcCCceecchHHHHhhccccccc
Confidence 455677888888887654 33 2333333 34445556652122345677777877765
|
| >d1onwa2 c.1.9.13 (A:63-346) Isoaspartyl dipeptidase, catalytic domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: Metallo-dependent hydrolases family: Isoaspartyl dipeptidase, catalytic domain domain: Isoaspartyl dipeptidase, catalytic domain species: Escherichia coli [TaxId: 562]
Probab=96.67 E-value=0.00057 Score=54.86 Aligned_cols=36 Identities=25% Similarity=0.361 Sum_probs=23.4
Q ss_pred HHHHhcCcceeecCCCC-----C---HHHHHHHHHHcCCeEEee
Q 022028 132 IELIHSGVTCFAEAGGQ-----H---VSEMAKAVELLGLRACLV 167 (304)
Q Consensus 132 ~~~l~~GvTtv~d~~~~-----~---~~~~~~~~~~~gir~~~~ 167 (304)
.+++++||||++|+... . .....+.....++..+..
T Consensus 28 ~~~l~~GvTTv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 71 (284)
T d1onwa2 28 SRLTEAGVTSVVGLLGTDSISRHPESLLAKTRALNEEGISAWML 71 (284)
T ss_dssp HHHHHTTEEEEEECCCSCCSSCCHHHHHHHHHHHHHHTSEEEEE
T ss_pred HHHHhCCeEEEecCCCCCChHhHHHHHHHHHHHHhhcCeeEEEe
Confidence 45789999999987532 1 223455566677776543
|
| >d1yixa1 c.1.9.12 (A:1-265) Putative deoxyribonuclease YcfH {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: Metallo-dependent hydrolases family: TatD Mg-dependent DNase-like domain: Putative deoxyribonuclease YcfH species: Escherichia coli [TaxId: 562]
Probab=96.33 E-value=0.012 Score=47.27 Aligned_cols=27 Identities=11% Similarity=0.295 Sum_probs=22.1
Q ss_pred HHHHHHHHHHHhCCeeeEEecCChhhH
Q 022028 224 LLLETRDMAREFKTGIHMHVAEIPYEN 250 (304)
Q Consensus 224 ~l~~~~~~a~~~~~~~~~H~~E~~~~~ 250 (304)
.+++-.++|+++++++.+|.-+...+.
T Consensus 112 ~f~~ql~lA~~~~lPv~iH~r~a~~~~ 138 (265)
T d1yixa1 112 SFIHHIQIGRELNKPVIVHTRDARADT 138 (265)
T ss_dssp HHHHHHHHHHHHTCCEEEEEESCHHHH
T ss_pred HHHHHHHHHHHhCCCcccchhhHHHHH
Confidence 467778999999999999998765544
|
| >d1xwya1 c.1.9.12 (A:1-260) Deoxyribonuclease TatD (MttC) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: Metallo-dependent hydrolases family: TatD Mg-dependent DNase-like domain: Deoxyribonuclease TatD (MttC) species: Escherichia coli [TaxId: 562]
Probab=96.26 E-value=0.0027 Score=51.20 Aligned_cols=28 Identities=14% Similarity=0.246 Sum_probs=22.3
Q ss_pred HHHHHHHHHHHHhCCeeeEEecCChhhH
Q 022028 223 RLLLETRDMAREFKTGIHMHVAEIPYEN 250 (304)
Q Consensus 223 e~l~~~~~~a~~~~~~~~~H~~E~~~~~ 250 (304)
+.+.+-+++|+++++++.+|+-....+.
T Consensus 108 ~~f~~ql~lA~~~~lPviiH~r~a~~~~ 135 (260)
T d1xwya1 108 RAFVAQLRIAADLNMPVFMHCRDAHERF 135 (260)
T ss_dssp HHHHHHHHHHHHHTCCEEEEEESCHHHH
T ss_pred HHHHHHHHHHHhcCCceEeeeccchhHH
Confidence 3466778999999999999998765543
|
| >d1ra0a1 b.92.1.2 (A:4-55,A:376-426) Cytosine deaminase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Composite domain of metallo-dependent hydrolases superfamily: Composite domain of metallo-dependent hydrolases family: Cytosine deaminase domain: Cytosine deaminase species: Escherichia coli [TaxId: 562]
Probab=96.05 E-value=0.0018 Score=43.65 Aligned_cols=52 Identities=13% Similarity=0.333 Sum_probs=37.5
Q ss_pred EEEccEEEecCCCCceeeeeeEEEeCCEEEEecCChhhhhhhcCCCceEEeCCCCEeecccc
Q 022028 22 ILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFV 83 (304)
Q Consensus 22 li~~~~ii~~~~~~~~~~~~~I~I~~g~I~~i~~~~~~~~~~~~~~~~vID~~g~iv~PG~I 83 (304)
.|+|+++-.-+ .. ..|.|+||+|.+|.+..+.. ....+.+|++|.+++|-+|
T Consensus 4 ~I~NarL~gr~---GL---~~I~I~~G~i~~I~pq~~~~----~~~~d~lDa~GgL~~p~~i 55 (103)
T d1ra0a1 4 TIINARLPGEE---GL---WQIHLQDGKISAIDAQSGVM----PITENSLDAEQGLVIPLII 55 (103)
T ss_dssp EEEEEBCTTCC---SE---EEEEEETTEEEEEEEESSCC----CCCTTEEECTTCEEESEEE
T ss_pred eEEEEEeCCCC---cE---EEEEecCCEEeeeecCCccc----cCCCcceeccCCcccCcEE
Confidence 57888887533 22 38999999999999764321 1245689999999999433
|
| >d2ooda1 b.92.1.4 (A:3-72,A:398-467) Guanine deaminase {Bradyrhizobium japonicum [TaxId: 375]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Composite domain of metallo-dependent hydrolases superfamily: Composite domain of metallo-dependent hydrolases family: SAH/MTA deaminase-like domain: Guanine deaminase species: Bradyrhizobium japonicum [TaxId: 375]
Probab=95.97 E-value=0.002 Score=46.44 Aligned_cols=41 Identities=24% Similarity=0.401 Sum_probs=34.5
Q ss_pred ceeeeeeEEEeCCEEEEecCChhhhhhhcCCCceEEeCCCCEe
Q 022028 36 RVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQIL 78 (304)
Q Consensus 36 ~~~~~~~I~I~~g~I~~i~~~~~~~~~~~~~~~~vID~~g~iv 78 (304)
+..++|.++|+||+|+++|+.......+| +.+++|.+++++
T Consensus 29 ~~~~DG~llie~G~I~a~G~~~~l~~~~p--ga~v~d~~d~lg 69 (140)
T d2ooda1 29 RFHQDGLMVVTDGVIKAFGPYEKIAAAHP--GVEITHIKDRII 69 (140)
T ss_dssp EEEEEEEEEEESSBEEEEEEHHHHHHHST--TCEEEEEEEEEE
T ss_pred EEecCcEEEEeCCEEEEecCHHHHhhcCC--CceEEecCCceE
Confidence 45689999999999999999888777766 578999988764
|
| >d2icsa1 b.92.1.8 (A:4-54,A:322-371) Putative adenine deaminase EF0837 {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Composite domain of metallo-dependent hydrolases superfamily: Composite domain of metallo-dependent hydrolases family: Adenine deaminase domain: Putative adenine deaminase EF0837 species: Enterococcus faecalis [TaxId: 1351]
Probab=95.50 E-value=0.0062 Score=40.88 Aligned_cols=46 Identities=15% Similarity=0.196 Sum_probs=35.8
Q ss_pred ccEEEEccEEEecCCCCceeeeeeEEEeCCEEEEecCChhhhhhhcCCCceEEeCCCCE
Q 022028 19 STMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQI 77 (304)
Q Consensus 19 ~~~li~~~~ii~~~~~~~~~~~~~I~I~~g~I~~i~~~~~~~~~~~~~~~~vID~~g~i 77 (304)
.+++|||++.+++ ++ .+|.|.+|||.+|++..+. .+.+++|+.|..
T Consensus 2 ~d~~i~~~~~~~g----~~---~diai~~~ki~a~~~~~~~------~a~~~~~L~~~~ 47 (101)
T d2icsa1 2 YDLLIKNGQTVNG----MP---VEIAIKEKKIAAVAATISG------SAKETIHLEPGT 47 (101)
T ss_dssp EEEEEEEEECTTS----CE---EEEEEETTEEEEEESCCCC------CEEEEEECCTTC
T ss_pred ccEEEEcceecCC----Ce---EEEEeccCeeeeecccccc------cchheEecCCce
Confidence 3689999999863 33 3899999999999976542 367899998853
|
| >d1o12a2 c.1.9.10 (A:44-331) N-acetylglucosamine-6-phosphate deacetylase, NagA, catalytic domain {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: Metallo-dependent hydrolases family: N-acetylglucosamine-6-phosphate deacetylase, NagA, catalytic domain domain: N-acetylglucosamine-6-phosphate deacetylase, NagA, catalytic domain species: Thermotoga maritima [TaxId: 2336]
Probab=94.80 E-value=0.0082 Score=47.84 Aligned_cols=15 Identities=33% Similarity=0.312 Sum_probs=11.9
Q ss_pred HHHHhcCcceeecCC
Q 022028 132 IELIHSGVTCFAEAG 146 (304)
Q Consensus 132 ~~~l~~GvTtv~d~~ 146 (304)
+.+++.||||+++..
T Consensus 25 ~~~l~~GvTTv~~~~ 39 (288)
T d1o12a2 25 EFLYSQGVTTFLATT 39 (288)
T ss_dssp HHHHTTTEEEEEEEC
T ss_pred HHHHhCCeEEEcCCC
Confidence 457899999998653
|
| >d3be7a1 b.92.1.9 (A:3-56,A:360-400) Zn-dependent arginine carboxypeptidase {Unidentified organism [TaxId: 32644]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Composite domain of metallo-dependent hydrolases superfamily: Composite domain of metallo-dependent hydrolases family: Zn-dependent arginine carboxypeptidase-like domain: Zn-dependent arginine carboxypeptidase species: Unidentified organism [TaxId: 32644]
Probab=87.59 E-value=0.59 Score=30.53 Aligned_cols=63 Identities=11% Similarity=0.281 Sum_probs=46.4
Q ss_pred cEEEEccEEEecCCCCceeeeeeEEEeCCEEEEecCChhhhhhhcCCCceEEeCCCCEeecccc---ccCccchh
Q 022028 20 TMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFV---NTHVHTSQ 91 (304)
Q Consensus 20 ~~li~~~~ii~~~~~~~~~~~~~I~I~~g~I~~i~~~~~~~~~~~~~~~~vID~~g~iv~PG~I---D~H~Hl~~ 91 (304)
+++++--..++... ..+-..+++|++|.|.+|+.... .+.+++...+++.+|++- ++|.++..
T Consensus 3 d~~~~pk~yL~~~~--g~li~a~l~v~~G~i~ai~~~t~-------~~A~il~l~d~illG~I~~Gk~ADlvlvd 68 (95)
T d3be7a1 3 DFLIKSKGYLDIQT--GEIIKADLLIRNGKIAEIGKINT-------KDATVISIPDLILIPQIKEGFDADIVGVI 68 (95)
T ss_dssp CEEEEEEEEECTTT--CCEECCEEEEETTEEEEEECCCC-------SSSEEEEEEEEEEEESCCTTSBCCEEEES
T ss_pred ceEecCcceecccc--chhhhhhhhhhcCcHHHHHhhcc-------ChHHhcCCCCccccceeccCceeeEEEEc
Confidence 46777777776442 33457799999999999986432 356899999988788876 77777754
|
| >d2dvta1 c.1.9.15 (A:1-325) Thermophilic reversible gamma-resorcylate decarboxylase {Rhizobium sp. MTP-10005 [TaxId: 267998]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: Metallo-dependent hydrolases family: PP1699/LP2961-like domain: Thermophilic reversible gamma-resorcylate decarboxylase species: Rhizobium sp. MTP-10005 [TaxId: 267998]
Probab=85.47 E-value=3.8 Score=32.69 Aligned_cols=28 Identities=4% Similarity=-0.155 Sum_probs=23.2
Q ss_pred CCHHHHHHHHHHHHHhCCeeeEEecCCh
Q 022028 220 ATDRLLLETRDMAREFKTGIHMHVAEIP 247 (304)
Q Consensus 220 ~~~e~l~~~~~~a~~~~~~~~~H~~E~~ 247 (304)
...+.+..+.+.|.++|+++.+|.....
T Consensus 142 ~~d~~~~pi~~~~~e~~lpv~iH~~~~~ 169 (325)
T d2dvta1 142 YDLPQYRPFWGEVEKLDVPFYLHPRNPL 169 (325)
T ss_dssp TTSGGGHHHHHHHHHHTCCEEEECCCCC
T ss_pred ccCcccchHHHHHhhCCceEEEecCCCC
Confidence 4566788899999999999999986543
|
| >d2gwga1 c.1.9.15 (A:1-342) 4-oxalomesaconate hydratase LigJ {Rhodopseudomonas palustris [TaxId: 1076]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: Metallo-dependent hydrolases family: PP1699/LP2961-like domain: 4-oxalomesaconate hydratase LigJ species: Rhodopseudomonas palustris [TaxId: 1076]
Probab=82.57 E-value=1.3 Score=35.61 Aligned_cols=29 Identities=21% Similarity=0.204 Sum_probs=22.9
Q ss_pred CCHHHHHHHHHHHHHhCCeeeEEecCChh
Q 022028 220 ATDRLLLETRDMAREFKTGIHMHVAEIPY 248 (304)
Q Consensus 220 ~~~e~l~~~~~~a~~~~~~~~~H~~E~~~ 248 (304)
.+.+.+..+.+.|.++|+++.+|......
T Consensus 156 l~d~~~~~~~~~~~~~glpv~~H~~~~~~ 184 (342)
T d2gwga1 156 LTDRIWYPIYEKMVELEIPAMIHVSTSCN 184 (342)
T ss_dssp TTSGGGHHHHHHHHHHTCCEEECCCC---
T ss_pred CCCHHHHHHHHHhhcCCCeEEEccCCCcC
Confidence 46667888999999999999999876653
|