Citrus Sinensis ID: 022080

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300---
Protein Sequence
MASRYWVVSLPVQNSAASVWNRLQEQISKHSFDTPLYRFNIPNLRVGTLDSLLALSDDLVKSNSFVESVSHKIRRQIEELERVSGIESSSLSVDGVPVDTYLTRFVWDEAKYPTMSPLREIVDGIHTLVAKIEDDLKVRVAEYNNVRSQLNAINRKQSGSLAVRDLSNLVKPEDIITSEHLVTLLAVVPKYSQKDWLASYETLTSYVVPRSSKLLYEDNEYALYTVTLFGRVADNFRIAAREKGFQIRDFEYSSEAQESRNQELEKLVHDQESLRSSLLQWCYTSYGEVCSTFLHEIYSINLS
Secondary Structure (PSIPRED)
ccccEEEEEEcccccHHHHHHHHHHHHHccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccEEEEEEEccccHHHHHHHHccccccccccccccccccccEEEEEEEEEcccHHHHHHHHHHccccEEEccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccc
Secondary Structure Prediction (SSPRO)
cccEEEEEEccccccHHHHHHHHHHHHHccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHcccccccHHHHHHccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHcccHHHccccHHHHEEEEEccHHHHHHHHHHHHHHHcccccccHHHHHccccHHHHHHHHHHHHHHHHHHHHHHcccEEEEEEccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEccc
Coil and Loop (DISEMBL)
masrywvvslpvqnsAASVWNRLQEQIskhsfdtplyrfnipnlrvgTLDSLLALSDDLVKSNSFVESVSHKIRRQIEELErvsgiessslsvdgvpvdtyltrfvwdeakyptmsplREIVDGIHTLVAKIEDDLKVRVAEYNNVRSQLNAINrkqsgslavrdlsnlvkpediitSEHLVTLLAVVPKYSQKDWLASYETLTSyvvprsskllyedneYALYTVTLFGRVADNFRIAAREKGfqirdfeysseAQESRNQELEKLVHDQESLRSSLLQWCYTSYGEVCSTFLHEIYSINLS
Flexible Loop (DISEMBL)
MASRYWVVSLPVQNSAASVWNRLQEQISKHSFDTPLYRFNIPNLRVGTLDSLLALSDDLVKSnsfvesvshkirrQIEElervsgiessslsvdgvpvDTYLTRFVWDEAKYPTMSPLREIVDGIHTLVAKIEDDLKVRVAEYNNVRsqlnainrkqsgslavRDLSNLVKPEDIITSEHLVTLLAVVPKYSQKDWLASYETLTSYVVPRSSKLLYEDNEYALYTVTLFGRVADNFRIAAREKGFQIRDFEYSSEAQESRNQELEKLVHDQESLRSSLLQWCYTSYGEVCSTFLHEIYSINLS
Low Complexity Region (SEG)
MASRYWVVSLPVQNSAASVWNRLQEQISKHSFDTPLYRFNIPNLRVGTldsllalsddlVKSNSFVESVSHKIRRQIEELERVSGIESSSLSVDGVPVDTYLTRFVWDEAKYPTMSPLREIVDGIHTLVAKIEDDLKVRVAEYNNVRSQLNAINRKQSGSLAVRDLSNLVKPEDIITSEHLVTLLAVVPKYSQKDWLASYETLTSYVVPRSSKLLYEDNEYALYTVTLFGRVADNFRIAAREKGFQIRDFEYSSEAQESRNQELEKLVHDQESLRSSLLQWCYTSYGEVCSTFLHEIYSINLS
Disordered region (IsUnstruct)
****YWVVSLPVQNSAASVWNRLQEQISKHSFDTPLYRFNIPNLRVGTLDSLLALSDDLVKSNSFVESVSHKIRRQIE*L*********SLSVDGVPVDTYLTRFVWDEAKYPTMSPLREIVDGIHTLVAKIEDDLKVRVAEYNNVRSQLNAINRKQSGSLAVRDLSNLVKPEDIITSEHLVTLLAVVPKYSQKDWLASYETLTSYVVPRSSKLLYEDNEYALYTVTLFGRVADNFRIAAREKGFQIRDF*************************SSLLQWCYTSYGEVCSTFLHEIYSI***
Disordered Region (DISOPRED)
MASRYWVVSLPVQNSAASVWNRLQEQISKHSFDTPLYRFNIPNLRVGTLDSLLALSDDLVKSNSFVESVSHKIRRQIEE***********LSVDGVPVDTYLTRFVWDEAKYPTMSPLREIVDGIHTLVAKIEDDLKVRVAEYN***************SLAVRDLSNLVKPEDIITSEHLVTLLAVVPKYSQKDWLASYETLTSYVVPRSSKLLYEDNEYALYTVTLFGRVADNFRIAAREKGFQIRDFE************************SSLLQWCYTSYGEVCSTFLHEIYSINLS
Disordered Region (DISEMBL)
MASRYWVVSLPVQNSAASVWNRLQEQISKHSFDTPLYRFNIPNLRVGTLDSLLALSDDLVKSNSFVESVSHKIRRQIEELERVSGIESSSLSVDGVPVDTYLTRFVWDEAKYPTMSPLREIVDGIHTLVAKIEDDLKVRVAEYNNVRSQLNAINRKQSGSLAVRDLSNLVKPEDIITSEHLVTLLAVVPKYSQKDWLASYETLTSYVVPRSSKLLYEDNEYALYTVTLFGRVADNFRIAAREKGFQIRDFEY*********************LRSSLLQWCYTSYGEVCSTFLHEIYSINLS
Disordered Region (DISPRO)
*ASRYWVVSLPVQNSAASVWNRLQEQISKHSFDTPLYRFNIPNLRVGTLDSLLALSDDLVKSNSFVESVSHKIRRQIEELERVSGIESSSLSVDGVPVDTYLTRFVWDEAKYPTMSPLREIVDGIHTLVAKIEDDLKVRVAEYNNVRSQLNAINRKQSGSLAVRDLSNLVKPEDIITSEHLVTLLAVVPKYSQKDWLASYETLTSYVVPRSSKLLYEDNEYALYTVTLFGRVADNFRIAAREKGFQIRDFEYSSEAQESRNQELEKLVHDQESLRSSLLQWCYTSYGEVCSTFLHEIYSINLS
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHoooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MASRYWVVSLPVQNSAASVWNRLQEQISKHSFDTPLYRFNIPNLRVGTLDSLLALSDDLVKSNSFVESVSHKIRRQIEELERVSGIESSSLSVDGVPVDTYLTRFVWDEAKYPTMSPLREIVDGIHTLVAKIEDDLKVRVAEYNNVRSQLNAINRKQSGSLAVRDLSNLVKPEDIITSEHLVTLLAVVPKYSQKDWLASYETLTSYVVPRSSKLLYEDNEYALYTVTLFGRVADNFRIAAREKGFQIRDFEYSxxxxxxxxxxxxxxxxxxxxxRSSLLQWCYTSYGEVCSTFLHEIYSINLS
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	303	2.2.26 [Sep-21-2011]
Q9SDS7	375	V-type proton ATPase subu	yes	no	0.973	0.786	0.857	1e-150
Q9SCB9	354	V-type proton ATPase subu	N/A	no	0.914	0.782	0.748	1e-124
Q7T385	383	V-type proton ATPase subu	yes	no	0.966	0.765	0.393	4e-60
Q5RDQ7	382	V-type proton ATPase subu	yes	no	0.966	0.767	0.396	1e-58
Q4R5H9	382	V-type proton ATPase subu	N/A	no	0.966	0.767	0.396	1e-58
P21283	382	V-type proton ATPase subu	yes	no	0.966	0.767	0.396	1e-58
P21282	382	V-type proton ATPase subu	yes	no	0.966	0.767	0.393	4e-58
Q5FVI6	382	V-type proton ATPase subu	yes	no	0.966	0.767	0.393	6e-58
Q9U5N1	385	V-type proton ATPase subu	N/A	no	0.957	0.753	0.393	7e-58
Q9Z1G3	382	V-type proton ATPase subu	yes	no	0.966	0.767	0.393	9e-58

>sp|Q9SDS7|VATC_ARATH V-type proton ATPase subunit C OS=Arabidopsis thaliana GN=VHA-C PE=1 SV=1

 Score =  530 bits (1365), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 253/295 (85%), Positives = 276/295 (93%)

Query: 1   MASRYWVVSLPVQNSAASVWNRLQEQISKHSFDTPLYRFNIPNLRVGTLDSLLALSDDLV 60
           M SRYWVVSLPV++SA+S+WNRLQEQISKHSFDTP+YRFNIPNLRVGTLDSLLAL DDL+
Sbjct: 1   MTSRYWVVSLPVKDSASSLWNRLQEQISKHSFDTPVYRFNIPNLRVGTLDSLLALGDDLL 60

Query: 61  KSNSFVESVSHKIRRQIEELERVSGIESSSLSVDGVPVDTYLTRFVWDEAKYPTMSPLRE 120
           KSNSFVE VS KIRRQIEELER+SG+ES++L+VDGVPVD+YLTRFVWDEAKYPTMSPL+E
Sbjct: 61  KSNSFVEGVSQKIRRQIEELERISGVESNALTVDGVPVDSYLTRFVWDEAKYPTMSPLKE 120

Query: 121 IVDGIHTLVAKIEDDLKVRVAEYNNVRSQLNAINRKQSGSLAVRDLSNLVKPEDIITSEH 180
           +VD I + VAKIEDDLKVRVAEYNN+R QLNAINRKQSGSLAVRDLSNLVKPEDI+ SEH
Sbjct: 121 VVDNIQSQVAKIEDDLKVRVAEYNNIRGQLNAINRKQSGSLAVRDLSNLVKPEDIVESEH 180

Query: 181 LVTLLAVVPKYSQKDWLASYETLTSYVVPRSSKLLYEDNEYALYTVTLFGRVADNFRIAA 240
           LVTLLAVVPKYSQKDWLA YETLT YVVPRSSK L+EDNEYALYTVTLF RVADNFRIAA
Sbjct: 181 LVTLLAVVPKYSQKDWLACYETLTDYVVPRSSKKLFEDNEYALYTVTLFTRVADNFRIAA 240

Query: 241 REKGFQIRDFEYSSEAQESRNQELEKLVHDQESLRSSLLQWCYTSYGEVCSTFLH 295
           REKGFQ+RDFE S EAQE+R QEL KLV DQESLRSSLLQWCYTSYGEV S+++H
Sbjct: 241 REKGFQVRDFEQSVEAQETRKQELAKLVQDQESLRSSLLQWCYTSYGEVFSSWMH 295

Subunit of the peripheral V1 complex of vacuolar ATPase. Subunit C is necessary for the assembly of the catalytic sector of the enzyme and is likely to have a specific function in its catalytic activity. V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells.
Arabidopsis thaliana (taxid: 3702)

>sp|Q9SCB9|VATC_HORVU V-type proton ATPase subunit C OS=Hordeum vulgare GN=VATC PE=1 SV=1

 Score =  445 bits (1145), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 211/282 (74%), Positives = 245/282 (86%), Gaps = 5/282 (1%)

Query: 1   MASRYWVVSLPV--QNSAA---SVWNRLQEQISKHSFDTPLYRFNIPNLRVGTLDSLLAL 55
           MA+RYW+ +LPV   N AA   ++W RLQE IS+HSFDTPLYRF +P+LR GTLDSLLAL
Sbjct: 1   MATRYWIAALPVADDNVAAGKTALWARLQEAISRHSFDTPLYRFTVPDLRPGTLDSLLAL 60

Query: 56  SDDLVKSNSFVESVSHKIRRQIEELERVSGIESSSLSVDGVPVDTYLTRFVWDEAKYPTM 115
           SDDLVKSN F+E VSHKIRRQIE+LER  G+E  +L+VDGVPVD+YLTRFVWDE KYP  
Sbjct: 61  SDDLVKSNIFIEGVSHKIRRQIEDLERAGGVEPGTLTVDGVPVDSYLTRFVWDEGKYPVN 120

Query: 116 SPLREIVDGIHTLVAKIEDDLKVRVAEYNNVRSQLNAINRKQSGSLAVRDLSNLVKPEDI 175
           +PL+E V  I + VAKIEDD+KVRVAEY NV+SQL AINRKQ+GSLAVRDLSNL+KPED+
Sbjct: 121 APLKETVASIQSQVAKIEDDMKVRVAEYGNVKSQLGAINRKQTGSLAVRDLSNLIKPEDM 180

Query: 176 ITSEHLVTLLAVVPKYSQKDWLASYETLTSYVVPRSSKLLYEDNEYALYTVTLFGRVADN 235
           +TSEHLVTLL++VPKYSQKDWLASYE+L ++VVPRSSK LYEDNEYALYTVTLF +V DN
Sbjct: 181 VTSEHLVTLLSIVPKYSQKDWLASYESLDTFVVPRSSKKLYEDNEYALYTVTLFAKVVDN 240

Query: 236 FRIAAREKGFQIRDFEYSSEAQESRNQELEKLVHDQESLRSS 277
           F++ AREKGFQIRDFEYS EAQESR QELEKL+ DQE +R+S
Sbjct: 241 FKVHAREKGFQIRDFEYSPEAQESRKQELEKLLQDQEVMRTS 282

Subunit of the peripheral V1 complex of vacuolar ATPase. Subunit C is necessary for the assembly of the catalytic sector of the enzyme and is likely to have a specific function in its catalytic activity. V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells.

Hordeum vulgare (taxid: 4513)

>sp|Q7T385|VTC1A_DANRE V-type proton ATPase subunit C 1-A OS=Danio rerio GN=atp6v1c1a PE=2 SV=1

 Score =  231 bits (590), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 116/295 (39%), Positives = 187/295 (63%), Gaps = 2/295 (0%)

Query: 3   SRYWVVSLPVQNSAASVWNRLQEQISKHSFDTPLYRFNIPNLRVGTLDSLLALSDDLVKS 62
           + +W++S P + +    W++L    ++ +  +   +FNIP+L+VGTLD L+ LSD+L K 
Sbjct: 2   TEFWLISAPGEKTCQQTWDKLMTATTRTNNLSTNNKFNIPDLKVGTLDVLVGLSDELAKL 61

Query: 63  NSFVESVSHKIRRQIEE-LERVSGIESSSLSVDGVPVDTYLTRFVWDEAKYPTMSPLREI 121
           ++FVESV  K+ + + + LE        +L  +GV + TY+TRF WD AKYP    L+ I
Sbjct: 62  DAFVESVVKKVAQYMADVLEDSRDKVQENLLANGVDLVTYVTRFQWDMAKYPIKQSLKNI 121

Query: 122 VDGIHTLVAKIEDDLKVRVAEYNNVRSQLNAINRKQSGSLAVRDLSNLVKPED-IITSEH 180
            + I   V++I++DLK R + YNN++  L  + RK +GSL  R L+++VK +D ++ SE+
Sbjct: 122 SEIISKQVSQIDNDLKARASAYNNLKGNLQNLERKNAGSLLTRSLADIVKKDDFVLDSEY 181

Query: 181 LVTLLAVVPKYSQKDWLASYETLTSYVVPRSSKLLYEDNEYALYTVTLFGRVADNFRIAA 240
           L+TLL VVPK +  DW  +YETL   VVPRS+ LL+ED++  L+TVTLF +  D+FR  A
Sbjct: 182 LITLLVVVPKTNYTDWQRTYETLAEMVVPRSTNLLFEDHDSGLFTVTLFRKAIDDFRHKA 241

Query: 241 REKGFQIRDFEYSSEAQESRNQELEKLVHDQESLRSSLLQWCYTSYGEVCSTFLH 295
           RE  F +RDF+Y+ E  ++  +E+ +L  D++     L++W   ++ E    ++H
Sbjct: 242 RENKFTVRDFQYNEEEMKADKEEMTRLSTDKKKQFGPLVRWLKVNFSEAFIAWVH 296

Subunit of the peripheral V1 complex of vacuolar ATPase. Subunit C is necessary for the assembly of the catalytic sector of the enzyme and is likely to have a specific function in its catalytic activity. V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells.

Danio rerio (taxid: 7955)

>sp|Q5RDQ7|VATC1_PONAB V-type proton ATPase subunit C 1 OS=Pongo abelii GN=ATP6V1C1 PE=2 SV=1

 Score =  226 bits (576), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 117/295 (39%), Positives = 179/295 (60%), Gaps = 2/295 (0%)

Query: 3   SRYWVVSLPVQNSAASVWNRLQEQISKHSFDTPLYRFNIPNLRVGTLDSLLALSDDLVKS 62
           + +W++S P + +    W +L    SK++      +FNIP+L+VGTLD L+ LSD+L K 
Sbjct: 2   TEFWLISAPGEKTCQQTWEKLHAATSKNNNLAVTSKFNIPDLKVGTLDVLVGLSDELAKL 61

Query: 63  NSFVESVSHKIRRQIEE-LERVSGIESSSLSVDGVPVDTYLTRFVWDEAKYPTMSPLREI 121
           ++FVE V  K+ + + + LE        +L  +GV + TY+TRF WD AKYP    L+ I
Sbjct: 62  DAFVEGVVKKVAQYMADVLEDSKDKVQENLLANGVDLVTYITRFQWDMAKYPIKQSLKNI 121

Query: 122 VDGIHTLVAKIEDDLKVRVAEYNNVRSQLNAINRKQSGSLAVRDLSNLVKPED-IITSEH 180
            + I   V +I++DLK R + YNN++  L  + RK +GSL  R L+ +VK +D ++ SE+
Sbjct: 122 SEIIAKGVTQIDNDLKSRASAYNNLKGNLQNLERKNAGSLLTRSLAEIVKKDDFVLDSEY 181

Query: 181 LVTLLAVVPKYSQKDWLASYETLTSYVVPRSSKLLYEDNEYALYTVTLFGRVADNFRIAA 240
           LVTLL VVPK +  DW+  YETL   VVPRSS +L ED +  L  VTLF +  D+FR  A
Sbjct: 182 LVTLLVVVPKLNHNDWIKQYETLAEMVVPRSSNVLSEDQDSYLCNVTLFRKAVDDFRHKA 241

Query: 241 REKGFQIRDFEYSSEAQESRNQELEKLVHDQESLRSSLLQWCYTSYGEVCSTFLH 295
           RE  F +RDF+Y+ E  ++  +E+ +L  D++     L++W   ++ E    ++H
Sbjct: 242 RENKFIVRDFQYNEEEMKADKEEMNRLSTDKKKQFGPLVRWLKVNFSEAFIAWIH 296

Subunit of the peripheral V1 complex of vacuolar ATPase. Subunit C is necessary for the assembly of the catalytic sector of the enzyme and is likely to have a specific function in its catalytic activity. V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells.

Pongo abelii (taxid: 9601)

>sp|Q4R5H9|VATC1_MACFA V-type proton ATPase subunit C 1 OS=Macaca fascicularis GN=ATP6V1C1 PE=2 SV=1

 Score =  226 bits (576), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 117/295 (39%), Positives = 179/295 (60%), Gaps = 2/295 (0%)

Query: 3   SRYWVVSLPVQNSAASVWNRLQEQISKHSFDTPLYRFNIPNLRVGTLDSLLALSDDLVKS 62
           + +W++S P + +    W +L    SK++      +FNIP+L+VGTLD L+ LSD+L K 
Sbjct: 2   TEFWLISAPGEKTCQQTWEKLHAATSKNNNLAVTSKFNIPDLKVGTLDVLVGLSDELAKL 61

Query: 63  NSFVESVSHKIRRQIEE-LERVSGIESSSLSVDGVPVDTYLTRFVWDEAKYPTMSPLREI 121
           ++FVE V  K+ + + + LE        +L  +GV + TY+TRF WD AKYP    L+ I
Sbjct: 62  DAFVEGVVKKVAQYMADVLEDSKDKVQENLLANGVDLVTYITRFQWDMAKYPIKQSLKNI 121

Query: 122 VDGIHTLVAKIEDDLKVRVAEYNNVRSQLNAINRKQSGSLAVRDLSNLVKPED-IITSEH 180
            + I   V +I++DLK R + YNN++  L  + RK +GSL  R L+ +VK +D ++ SE+
Sbjct: 122 SEIIAKGVTQIDNDLKSRASAYNNLKGNLQNLERKNAGSLLTRSLAEIVKKDDFVLDSEY 181

Query: 181 LVTLLAVVPKYSQKDWLASYETLTSYVVPRSSKLLYEDNEYALYTVTLFGRVADNFRIAA 240
           LVTLL VVPK +  DW+  YETL   VVPRSS +L ED +  L  VTLF +  D+FR  A
Sbjct: 182 LVTLLVVVPKLNHNDWIKQYETLAEMVVPRSSNVLSEDQDSYLCNVTLFRKAVDDFRHKA 241

Query: 241 REKGFQIRDFEYSSEAQESRNQELEKLVHDQESLRSSLLQWCYTSYGEVCSTFLH 295
           RE  F +RDF+Y+ E  ++  +E+ +L  D++     L++W   ++ E    ++H
Sbjct: 242 RENKFIVRDFQYNEEEMKADKEEMNRLSTDKKKQFGPLVRWLKVNFSEAFIAWIH 296

Subunit of the peripheral V1 complex of vacuolar ATPase. Subunit C is necessary for the assembly of the catalytic sector of the enzyme and is likely to have a specific function in its catalytic activity. V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells.

Macaca fascicularis (taxid: 9541)

>sp|P21283|VATC1_HUMAN V-type proton ATPase subunit C 1 OS=Homo sapiens GN=ATP6V1C1 PE=1 SV=4

 Score =  226 bits (576), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 117/295 (39%), Positives = 179/295 (60%), Gaps = 2/295 (0%)

Query: 3   SRYWVVSLPVQNSAASVWNRLQEQISKHSFDTPLYRFNIPNLRVGTLDSLLALSDDLVKS 62
           + +W++S P + +    W +L    SK++      +FNIP+L+VGTLD L+ LSD+L K 
Sbjct: 2   TEFWLISAPGEKTCQQTWEKLHAATSKNNNLAVTSKFNIPDLKVGTLDVLVGLSDELAKL 61

Query: 63  NSFVESVSHKIRRQIEE-LERVSGIESSSLSVDGVPVDTYLTRFVWDEAKYPTMSPLREI 121
           ++FVE V  K+ + + + LE        +L  +GV + TY+TRF WD AKYP    L+ I
Sbjct: 62  DAFVEGVVKKVAQYMADVLEDSKDKVQENLLANGVDLVTYITRFQWDMAKYPIKQSLKNI 121

Query: 122 VDGIHTLVAKIEDDLKVRVAEYNNVRSQLNAINRKQSGSLAVRDLSNLVKPED-IITSEH 180
            + I   V +I++DLK R + YNN++  L  + RK +GSL  R L+ +VK +D ++ SE+
Sbjct: 122 SEIIAKGVTQIDNDLKSRASAYNNLKGNLQNLERKNAGSLLTRSLAEIVKKDDFVLDSEY 181

Query: 181 LVTLLAVVPKYSQKDWLASYETLTSYVVPRSSKLLYEDNEYALYTVTLFGRVADNFRIAA 240
           LVTLL VVPK +  DW+  YETL   VVPRSS +L ED +  L  VTLF +  D+FR  A
Sbjct: 182 LVTLLVVVPKLNHNDWIKQYETLAEMVVPRSSNVLSEDQDSYLCNVTLFRKAVDDFRHKA 241

Query: 241 REKGFQIRDFEYSSEAQESRNQELEKLVHDQESLRSSLLQWCYTSYGEVCSTFLH 295
           RE  F +RDF+Y+ E  ++  +E+ +L  D++     L++W   ++ E    ++H
Sbjct: 242 RENKFIVRDFQYNEEEMKADKEEMNRLSTDKKKQFGPLVRWLKVNFSEAFIAWIH 296

Subunit of the peripheral V1 complex of vacuolar ATPase. Subunit C is necessary for the assembly of the catalytic sector of the enzyme and is likely to have a specific function in its catalytic activity. V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells.

Homo sapiens (taxid: 9606)

>sp|P21282|VATC1_BOVIN V-type proton ATPase subunit C 1 OS=Bos taurus GN=ATP6V1C1 PE=1 SV=3

 Score =  225 bits (573), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 116/295 (39%), Positives = 179/295 (60%), Gaps = 2/295 (0%)

Query: 3   SRYWVVSLPVQNSAASVWNRLQEQISKHSFDTPLYRFNIPNLRVGTLDSLLALSDDLVKS 62
           + +W++S P + +    W +L    +K++      +FNIP+L+VGTLD L+ LSD+L K 
Sbjct: 2   TEFWLISAPGEKTCQQTWEKLHAATTKNNNLAVSSKFNIPDLKVGTLDVLVGLSDELAKL 61

Query: 63  NSFVESVSHKIRRQIEE-LERVSGIESSSLSVDGVPVDTYLTRFVWDEAKYPTMSPLREI 121
           ++FVE V  K+ + + + LE        +L  +GV + TY+TRF WD AKYP    L+ I
Sbjct: 62  DAFVEGVVKKVAQYMADVLEDSKDKVQENLLANGVDLVTYITRFQWDMAKYPIKQSLKNI 121

Query: 122 VDGIHTLVAKIEDDLKVRVAEYNNVRSQLNAINRKQSGSLAVRDLSNLVKPED-IITSEH 180
            + I   V +I++DLK R + YNN++  L  + RK +GSL  R L+ +VK +D ++ SE+
Sbjct: 122 SEIIAKGVTQIDNDLKSRASAYNNLKGNLQNLERKNAGSLLTRSLAEIVKKDDFVLDSEY 181

Query: 181 LVTLLAVVPKYSQKDWLASYETLTSYVVPRSSKLLYEDNEYALYTVTLFGRVADNFRIAA 240
           LVTLL VVPK +  DW+  YETL   VVPRSS +L ED +  L  VTLF +  D+FR  A
Sbjct: 182 LVTLLVVVPKLNHNDWIKQYETLAEMVVPRSSNVLSEDQDSYLCNVTLFRKAVDDFRHKA 241

Query: 241 REKGFQIRDFEYSSEAQESRNQELEKLVHDQESLRSSLLQWCYTSYGEVCSTFLH 295
           RE  F +RDF+Y+ E  ++  +E+ +L  D++     L++W   ++ E    ++H
Sbjct: 242 RENKFIVRDFQYNEEEMKADKEEMNRLSTDKKKQFGPLVRWLKVNFSEAFIAWIH 296

Subunit of the peripheral V1 complex of vacuolar ATPase. Subunit C is necessary for the assembly of the catalytic sector of the enzyme and is likely to have a specific function in its catalytic activity. V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells.

Bos taurus (taxid: 9913)

>sp|Q5FVI6|VATC1_RAT V-type proton ATPase subunit C 1 OS=Rattus norvegicus GN=Atp6v1c1 PE=2 SV=1

 Score =  224 bits (571), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 116/295 (39%), Positives = 177/295 (60%), Gaps = 2/295 (0%)

Query: 3   SRYWVVSLPVQNSAASVWNRLQEQISKHSFDTPLYRFNIPNLRVGTLDSLLALSDDLVKS 62
           + +W++S P + +    W +L    +K++      +FNIP+L+VGTLD L+ LSD+L K 
Sbjct: 2   TEFWLISAPGEKTCQQTWEKLHAATTKNNNLAVSSKFNIPDLKVGTLDVLVGLSDELAKL 61

Query: 63  NSFVESVSHKIRRQIEE-LERVSGIESSSLSVDGVPVDTYLTRFVWDEAKYPTMSPLREI 121
           ++FVE V  K+ + + + LE        +L   GV + TY+TRF WD AKYP    L+ I
Sbjct: 62  DAFVEGVVKKVAQYMADVLEDSKDKVQENLLASGVDLVTYITRFQWDMAKYPIKQSLKNI 121

Query: 122 VDGIHTLVAKIEDDLKVRVAEYNNVRSQLNAINRKQSGSLAVRDLSNLVKPED-IITSEH 180
            + I   V +I++DLK R + YNN++  L  + RK +GSL  R L+ +VK +D ++ SE+
Sbjct: 122 SEIIAKGVTQIDNDLKSRASAYNNLKGNLQNLERKNAGSLLTRSLAEIVKKDDFVLDSEY 181

Query: 181 LVTLLAVVPKYSQKDWLASYETLTSYVVPRSSKLLYEDNEYALYTVTLFGRVADNFRIAA 240
           LVTLL VVPK +  DW+  YETL   VVPRSS +L ED +  L  VTLF +  D+FR  A
Sbjct: 182 LVTLLVVVPKLNHNDWIKQYETLAEMVVPRSSNVLSEDQDSYLCNVTLFKKAVDDFRHKA 241

Query: 241 REKGFQIRDFEYSSEAQESRNQELEKLVHDQESLRSSLLQWCYTSYGEVCSTFLH 295
           RE  F +RDF+Y+ E   +  +E+ +L  D++     L++W   ++ E    ++H
Sbjct: 242 RENKFIVRDFQYNEEEMRADKEEMNRLSTDKKKQFGPLVRWLKVNFSEAFIAWIH 296

Subunit of the peripheral V1 complex of vacuolar ATPase. Subunit C is necessary for the assembly of the catalytic sector of the enzyme and is likely to have a specific function in its catalytic activity. V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells.

Rattus norvegicus (taxid: 10116)

>sp|Q9U5N1|VATC_MANSE V-type proton ATPase subunit C OS=Manduca sexta PE=2 SV=1

 Score =  224 bits (570), Expect = 7e-58,   Method: Compositional matrix adjust.
 Identities = 117/297 (39%), Positives = 182/297 (61%), Gaps = 7/297 (2%)

Query: 3   SRYWVVSLPVQNSAASVWNRLQEQISKHSFDTPLYRFNIPNLRVGTLDSLLALSDDLVKS 62
           S YW++S P   +    W  L +    ++     Y+F IP+L+VGTLD L+ LSDDL K 
Sbjct: 2   SEYWLISAPGDKTCQQTWEALNQATKANNLSLN-YKFPIPDLKVGTLDQLVGLSDDLGKL 60

Query: 63  NSFVESVSHKIRRQIEEL---ERVSGIESSSLSVDGVPVDTYLTRFVWDEAKYPTMSPLR 119
           ++FVE V+ K+ + + E+   +R    E+ + + D +P   YLTRF WD AKYP    LR
Sbjct: 61  DTFVEGVTRKVAQYLGEVLEDQRDKLHENLTANNDDLP--HYLTRFQWDMAKYPIKQSLR 118

Query: 120 EIVDGIHTLVAKIEDDLKVRVAEYNNVRSQLNAINRKQSGSLAVRDLSNLVKPED-IITS 178
            I D I   V +I+ DLKV+ + YN ++  L  + +KQ+GSL  R+L++LVK E  I+ S
Sbjct: 119 NIADIISKQVGQIDADLKVKSSAYNALKGNLQNLEKKQTGSLLTRNLADLVKKEHFILDS 178

Query: 179 EHLVTLLAVVPKYSQKDWLASYETLTSYVVPRSSKLLYEDNEYALYTVTLFGRVADNFRI 238
           E+L TLL +VPK    DW A+YE +T  +VPRS++L+++D +Y L+TVTLF +V D F++
Sbjct: 179 EYLTTLLVIVPKSMFNDWNANYEKITDMIVPRSTQLIHQDGDYGLFTVTLFKKVVDEFKL 238

Query: 239 AAREKGFQIRDFEYSSEAQESRNQELEKLVHDQESLRSSLLQWCYTSYGEVCSTFLH 295
            ARE+ F +R+F Y+     +   E+ KL+ D++     L++W   ++ E    ++H
Sbjct: 239 HARERKFVVREFAYNEADLVAGKNEITKLLTDKKKQFGPLVRWLKVNFSECFCAWIH 295

Subunit of the peripheral V1 complex of vacuolar ATPase. Subunit C is necessary for the assembly of the catalytic sector of the enzyme and is likely to have a specific function in its catalytic activity. V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells.

Manduca sexta (taxid: 7130)

>sp|Q9Z1G3|VATC1_MOUSE V-type proton ATPase subunit C 1 OS=Mus musculus GN=Atp6v1c1 PE=1 SV=4

 Score =  224 bits (570), Expect = 9e-58,   Method: Compositional matrix adjust.
 Identities = 116/295 (39%), Positives = 178/295 (60%), Gaps = 2/295 (0%)

Query: 3   SRYWVVSLPVQNSAASVWNRLQEQISKHSFDTPLYRFNIPNLRVGTLDSLLALSDDLVKS 62
           + +W++S P + +    W +L    +K++      +FNIP+L+VGTLD L+ LSD+L K 
Sbjct: 2   TEFWLISAPGEKTCQQTWEKLHAATTKNNNLAVSSKFNIPDLKVGTLDVLVGLSDELAKL 61

Query: 63  NSFVESVSHKIRRQIEE-LERVSGIESSSLSVDGVPVDTYLTRFVWDEAKYPTMSPLREI 121
           ++FVE V  K+ + + + LE        +L   GV + TY+TRF WD AKYP    L+ I
Sbjct: 62  DAFVEGVVKKVAQYMADVLEDSKDKVQENLLASGVDLVTYITRFQWDMAKYPIKQSLKNI 121

Query: 122 VDGIHTLVAKIEDDLKVRVAEYNNVRSQLNAINRKQSGSLAVRDLSNLVKPED-IITSEH 180
            + I   V +I++DLK R + YNN++  L  + RK +GSL  R L+ +VK +D ++ SE+
Sbjct: 122 SEIIAKGVTQIDNDLKSRASAYNNLKGNLQNLERKNAGSLLTRSLAEIVKKDDFVLDSEY 181

Query: 181 LVTLLAVVPKYSQKDWLASYETLTSYVVPRSSKLLYEDNEYALYTVTLFGRVADNFRIAA 240
           LVTLL VVPK +  DW+  YETL   VVPRSS +L ED +  L  VTLF +  D+FR  A
Sbjct: 182 LVTLLVVVPKLNHNDWIKQYETLAEMVVPRSSNVLSEDQDSYLCNVTLFRKAVDDFRHKA 241

Query: 241 REKGFQIRDFEYSSEAQESRNQELEKLVHDQESLRSSLLQWCYTSYGEVCSTFLH 295
           RE  F +RDF+Y+ E  ++  +E+ +L  D++     L++W   ++ E    ++H
Sbjct: 242 RENKFIVRDFQYNEEEMKADKEEMTRLSTDKKKQFGPLVRWLKVNFSEAFIAWIH 296

Subunit of the peripheral V1 complex of vacuolar ATPase. Subunit C is necessary for the assembly of the catalytic sector of the enzyme and is likely to have a specific function in its catalytic activity. V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells.

Mus musculus (taxid: 10090)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	303
297844184	378	de-etiolated 3 [Arabidopsis lyrata subsp	0.973	0.780	0.854	1e-148
18391442	375	V-type proton ATPase subunit C [Arabidop	0.973	0.786	0.857	1e-148
255543599	376	vacuolar ATP synthase subunit C, putativ	0.973	0.784	0.894	1e-147
111154399	377	vacuolar H+-ATPase subunit C [Gossypium	0.973	0.782	0.874	1e-144
224129212	366	predicted protein [Populus trichocarpa]	0.973	0.806	0.871	1e-142
356498582	375	PREDICTED: V-type proton ATPase subunit	0.973	0.786	0.857	1e-142
356559482	375	PREDICTED: V-type proton ATPase subunit	0.973	0.786	0.854	1e-141
242091583	377	hypothetical protein SORBIDRAFT_09g03062	0.973	0.782	0.788	1e-140
226495029	377	LOC100281241 [Zea mays] gi|194698790|gb|	0.973	0.782	0.791	1e-139
225456459	375	PREDICTED: V-type proton ATPase subunit	0.973	0.786	0.844	1e-139

>gi|297844184|ref|XP_002889973.1| de-etiolated 3 [Arabidopsis lyrata subsp. lyrata] gi|297335815|gb|EFH66232.1| de-etiolated 3 [Arabidopsis lyrata subsp. lyrata]

 Score =  531 bits (1369), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 252/295 (85%), Positives = 278/295 (94%)

Query: 1   MASRYWVVSLPVQNSAASVWNRLQEQISKHSFDTPLYRFNIPNLRVGTLDSLLALSDDLV 60
           M SRYWVVSLPV++SA+++WNRLQEQISKHSFDTP+YRFNIPNLRVGTLDSLLAL DDL+
Sbjct: 1   MTSRYWVVSLPVKDSASTLWNRLQEQISKHSFDTPIYRFNIPNLRVGTLDSLLALGDDLL 60

Query: 61  KSNSFVESVSHKIRRQIEELERVSGIESSSLSVDGVPVDTYLTRFVWDEAKYPTMSPLRE 120
           KSNSFVE VS KIRRQIEELER+SG+ES++L+VDGVPVD+YLTRFVWDEAKYPTMSPL+E
Sbjct: 61  KSNSFVEGVSQKIRRQIEELERISGVESNALTVDGVPVDSYLTRFVWDEAKYPTMSPLKE 120

Query: 121 IVDGIHTLVAKIEDDLKVRVAEYNNVRSQLNAINRKQSGSLAVRDLSNLVKPEDIITSEH 180
           +VD I + VAKIEDDLKVRVAEYNN+R QLNAINRKQSGSLAVRDLSNLVKPEDI+ SEH
Sbjct: 121 VVDNIQSQVAKIEDDLKVRVAEYNNIRGQLNAINRKQSGSLAVRDLSNLVKPEDIVVSEH 180

Query: 181 LVTLLAVVPKYSQKDWLASYETLTSYVVPRSSKLLYEDNEYALYTVTLFGRVADNFRIAA 240
           LVTLLAVVPKYSQKDWLA YETLT YVVPRSSK L+EDNEYALYTVTLF RVADNFRI+A
Sbjct: 181 LVTLLAVVPKYSQKDWLACYETLTEYVVPRSSKKLFEDNEYALYTVTLFTRVADNFRISA 240

Query: 241 REKGFQIRDFEYSSEAQESRNQELEKLVHDQESLRSSLLQWCYTSYGEVCSTFLH 295
           REKGFQ+RDFE+S EAQE+R QELEKLV DQESLRSSLLQWCYTSYGEV S+++H
Sbjct: 241 REKGFQVRDFEHSVEAQETRKQELEKLVQDQESLRSSLLQWCYTSYGEVFSSWMH 295

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|18391442|ref|NP_563916.1| V-type proton ATPase subunit C [Arabidopsis thaliana] gi|12585488|sp|Q9SDS7.1|VATC_ARATH RecName: Full=V-type proton ATPase subunit C; Short=V-ATPase subunit C; AltName: Full=Vacuolar H(+)-ATPase subunit C; AltName: Full=Vacuolar proton pump subunit C gi|6636332|gb|AAF20146.1|AF208261_1 vacuolar ATP synthase subunit C [Arabidopsis thaliana] gi|8698731|gb|AAF78489.1|AC012187_9 Identical to vacuolar ATP sythase subunit C (DET3) from Arabidopsis thaliana gb|AF208261. ESTs gb|AA067533, gb|Z37481, gb|AA721838, gb|Z37180, gb|T21206 come from this gene [Arabidopsis thaliana] gi|12248023|gb|AAG50103.1|AF334725_1 putative vacuolar ATP synthase subunit C [Arabidopsis thaliana] gi|16649005|gb|AAL24354.1| Identical to vacuolar ATP sythase subunit C (DET3) [Arabidopsis thaliana] gi|20259972|gb|AAM13333.1| vacuolar ATP sythase subunit C [Arabidopsis thaliana] gi|225897918|dbj|BAH30291.1| hypothetical protein [Arabidopsis thaliana] gi|332190815|gb|AEE28936.1| V-type proton ATPase subunit C [Arabidopsis thaliana]

 Score =  530 bits (1365), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 253/295 (85%), Positives = 276/295 (93%)

Query: 1   MASRYWVVSLPVQNSAASVWNRLQEQISKHSFDTPLYRFNIPNLRVGTLDSLLALSDDLV 60
           M SRYWVVSLPV++SA+S+WNRLQEQISKHSFDTP+YRFNIPNLRVGTLDSLLAL DDL+
Sbjct: 1   MTSRYWVVSLPVKDSASSLWNRLQEQISKHSFDTPVYRFNIPNLRVGTLDSLLALGDDLL 60

Query: 61  KSNSFVESVSHKIRRQIEELERVSGIESSSLSVDGVPVDTYLTRFVWDEAKYPTMSPLRE 120
           KSNSFVE VS KIRRQIEELER+SG+ES++L+VDGVPVD+YLTRFVWDEAKYPTMSPL+E
Sbjct: 61  KSNSFVEGVSQKIRRQIEELERISGVESNALTVDGVPVDSYLTRFVWDEAKYPTMSPLKE 120

Query: 121 IVDGIHTLVAKIEDDLKVRVAEYNNVRSQLNAINRKQSGSLAVRDLSNLVKPEDIITSEH 180
           +VD I + VAKIEDDLKVRVAEYNN+R QLNAINRKQSGSLAVRDLSNLVKPEDI+ SEH
Sbjct: 121 VVDNIQSQVAKIEDDLKVRVAEYNNIRGQLNAINRKQSGSLAVRDLSNLVKPEDIVESEH 180

Query: 181 LVTLLAVVPKYSQKDWLASYETLTSYVVPRSSKLLYEDNEYALYTVTLFGRVADNFRIAA 240
           LVTLLAVVPKYSQKDWLA YETLT YVVPRSSK L+EDNEYALYTVTLF RVADNFRIAA
Sbjct: 181 LVTLLAVVPKYSQKDWLACYETLTDYVVPRSSKKLFEDNEYALYTVTLFTRVADNFRIAA 240

Query: 241 REKGFQIRDFEYSSEAQESRNQELEKLVHDQESLRSSLLQWCYTSYGEVCSTFLH 295
           REKGFQ+RDFE S EAQE+R QEL KLV DQESLRSSLLQWCYTSYGEV S+++H
Sbjct: 241 REKGFQVRDFEQSVEAQETRKQELAKLVQDQESLRSSLLQWCYTSYGEVFSSWMH 295

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255543599|ref|XP_002512862.1| vacuolar ATP synthase subunit C, putative [Ricinus communis] gi|223547873|gb|EEF49365.1| vacuolar ATP synthase subunit C, putative [Ricinus communis]

 Score =  526 bits (1355), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 264/295 (89%), Positives = 282/295 (95%)

Query: 1   MASRYWVVSLPVQNSAASVWNRLQEQISKHSFDTPLYRFNIPNLRVGTLDSLLALSDDLV 60
           MASRYWVVSLPVQNSA+++WNRLQ+QISKHSFDTPLYRFNIPNLRVGTLDSLL+LSDDLV
Sbjct: 1   MASRYWVVSLPVQNSASTLWNRLQDQISKHSFDTPLYRFNIPNLRVGTLDSLLSLSDDLV 60

Query: 61  KSNSFVESVSHKIRRQIEELERVSGIESSSLSVDGVPVDTYLTRFVWDEAKYPTMSPLRE 120
           KSNSF+E VSHKIRRQIEELERVSG+ESS+L+VDGVPVD+YLTRFVWDEAKYPT+SPLRE
Sbjct: 61  KSNSFIEGVSHKIRRQIEELERVSGVESSALTVDGVPVDSYLTRFVWDEAKYPTISPLRE 120

Query: 121 IVDGIHTLVAKIEDDLKVRVAEYNNVRSQLNAINRKQSGSLAVRDLSNLVKPEDIITSEH 180
            VD IHT VAKIEDDLKVRVAEYNNVRSQLNAINRKQSGSLAVRDLSNLVKPEDIITSEH
Sbjct: 121 TVDSIHTQVAKIEDDLKVRVAEYNNVRSQLNAINRKQSGSLAVRDLSNLVKPEDIITSEH 180

Query: 181 LVTLLAVVPKYSQKDWLASYETLTSYVVPRSSKLLYEDNEYALYTVTLFGRVADNFRIAA 240
           L TLLAVVPKYSQKDWLASYETLTSYVVPRSSK LYEDNEYALYTVTLF RVADNFR +A
Sbjct: 181 LTTLLAVVPKYSQKDWLASYETLTSYVVPRSSKKLYEDNEYALYTVTLFNRVADNFRTSA 240

Query: 241 REKGFQIRDFEYSSEAQESRNQELEKLVHDQESLRSSLLQWCYTSYGEVCSTFLH 295
           REKGFQIRDFEYS EAQE+R QELE+L+ DQES RSSLLQWCYTSYGEV S+++H
Sbjct: 241 REKGFQIRDFEYSPEAQENRKQELEQLMQDQESFRSSLLQWCYTSYGEVFSSWMH 295

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|111154399|gb|ABH07428.1| vacuolar H+-ATPase subunit C [Gossypium hirsutum]

 Score =  516 bits (1328), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 258/295 (87%), Positives = 280/295 (94%)

Query: 1   MASRYWVVSLPVQNSAASVWNRLQEQISKHSFDTPLYRFNIPNLRVGTLDSLLALSDDLV 60
           MASRYWVVSLPVQ+SA+++WN LQ+QISKHSFDTPLYRFNIPNLRVGTLDSLLALSDDL+
Sbjct: 1   MASRYWVVSLPVQSSASTLWNNLQDQISKHSFDTPLYRFNIPNLRVGTLDSLLALSDDLL 60

Query: 61  KSNSFVESVSHKIRRQIEELERVSGIESSSLSVDGVPVDTYLTRFVWDEAKYPTMSPLRE 120
           KSN+F+E VSHKIRRQIEELERVSG+E+++L+VDGVPVD+YLTRFVWDEAKYP MSPLRE
Sbjct: 61  KSNTFIEGVSHKIRRQIEELERVSGLETNALTVDGVPVDSYLTRFVWDEAKYPIMSPLRE 120

Query: 121 IVDGIHTLVAKIEDDLKVRVAEYNNVRSQLNAINRKQSGSLAVRDLSNLVKPEDIITSEH 180
           IVDGIHT VAKIEDDLKVRVAEYNNVR QLNAINRKQSGSLAVRDLSNLVKPEDIITSEH
Sbjct: 121 IVDGIHTQVAKIEDDLKVRVAEYNNVRGQLNAINRKQSGSLAVRDLSNLVKPEDIITSEH 180

Query: 181 LVTLLAVVPKYSQKDWLASYETLTSYVVPRSSKLLYEDNEYALYTVTLFGRVADNFRIAA 240
           LVTLLAVVPKYSQKDWL+SYETLT+YVVPRSSK LYEDNEYALYT TLFGRVADNFR +A
Sbjct: 181 LVTLLAVVPKYSQKDWLSSYETLTTYVVPRSSKKLYEDNEYALYTATLFGRVADNFRTSA 240

Query: 241 REKGFQIRDFEYSSEAQESRNQELEKLVHDQESLRSSLLQWCYTSYGEVCSTFLH 295
           RE+GFQ+RDFEYS EAQESR QELEKLV DQ  LRSSLLQWCY SYGEV S+++H
Sbjct: 241 RERGFQVRDFEYSPEAQESRKQELEKLVQDQYMLRSSLLQWCYASYGEVFSSWMH 295

Source: Gossypium hirsutum

Species: Gossypium hirsutum

Genus: Gossypium

Family: Malvaceae

Order: Malvales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224129212|ref|XP_002328918.1| predicted protein [Populus trichocarpa] gi|222839348|gb|EEE77685.1| predicted protein [Populus trichocarpa]

 Score =  511 bits (1317), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 257/295 (87%), Positives = 281/295 (95%)

Query: 1   MASRYWVVSLPVQNSAASVWNRLQEQISKHSFDTPLYRFNIPNLRVGTLDSLLALSDDLV 60
           MASRYW VSLPVQNSA+SVWN LQEQISKHSFDTPLYRFNIPNLRVGTLDSLL+LSDDLV
Sbjct: 1   MASRYWAVSLPVQNSASSVWNNLQEQISKHSFDTPLYRFNIPNLRVGTLDSLLSLSDDLV 60

Query: 61  KSNSFVESVSHKIRRQIEELERVSGIESSSLSVDGVPVDTYLTRFVWDEAKYPTMSPLRE 120
           +SNSF+E V+ KIRRQIEEL+RVSG+ES++L+VDGVPVD+YLTRFVWDEAKYPTMSPL+E
Sbjct: 61  RSNSFIEGVAQKIRRQIEELQRVSGVESNALTVDGVPVDSYLTRFVWDEAKYPTMSPLKE 120

Query: 121 IVDGIHTLVAKIEDDLKVRVAEYNNVRSQLNAINRKQSGSLAVRDLSNLVKPEDIITSEH 180
           IVD IHT VAKIEDDLKVRVAEYNNVRSQLNAINRKQSGSLAVRDLSNLVKPEDII SE+
Sbjct: 121 IVDSIHTQVAKIEDDLKVRVAEYNNVRSQLNAINRKQSGSLAVRDLSNLVKPEDIIVSEN 180

Query: 181 LVTLLAVVPKYSQKDWLASYETLTSYVVPRSSKLLYEDNEYALYTVTLFGRVADNFRIAA 240
           LVTLLA+VPKYSQKDWLASYETLTSYVVPRSSK LYEDNEYALYTVTLF RVADNFR ++
Sbjct: 181 LVTLLAIVPKYSQKDWLASYETLTSYVVPRSSKKLYEDNEYALYTVTLFHRVADNFRTSS 240

Query: 241 REKGFQIRDFEYSSEAQESRNQELEKLVHDQESLRSSLLQWCYTSYGEVCSTFLH 295
           R+KGFQIRD E+SSEAQE+R QELE++V DQESLRSSLLQWCYTSYGEV S+++H
Sbjct: 241 RDKGFQIRDIEHSSEAQENRKQELERIVQDQESLRSSLLQWCYTSYGEVFSSWMH 295

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356498582|ref|XP_003518129.1| PREDICTED: V-type proton ATPase subunit C-like [Glycine max]

 Score =  510 bits (1314), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 253/295 (85%), Positives = 278/295 (94%)

Query: 1   MASRYWVVSLPVQNSAASVWNRLQEQISKHSFDTPLYRFNIPNLRVGTLDSLLALSDDLV 60
           MA+RYWVVSLPVQNSA+++WN+LQEQISKHSFDTPLYRFNIPNLRVGTLDSLL+LSDD V
Sbjct: 1   MATRYWVVSLPVQNSASTLWNKLQEQISKHSFDTPLYRFNIPNLRVGTLDSLLSLSDDTV 60

Query: 61  KSNSFVESVSHKIRRQIEELERVSGIESSSLSVDGVPVDTYLTRFVWDEAKYPTMSPLRE 120
           KSNSFVE VSHKIRRQIEELERVSG+ SS L+VDGVPVD+YLTRFVWDEA+YPTMSPL+E
Sbjct: 61  KSNSFVEGVSHKIRRQIEELERVSGVVSSGLTVDGVPVDSYLTRFVWDEARYPTMSPLKE 120

Query: 121 IVDGIHTLVAKIEDDLKVRVAEYNNVRSQLNAINRKQSGSLAVRDLSNLVKPEDIITSEH 180
           I+DGIH  VAKIEDDLKVRV+EYNN+RSQLNAINRKQ+GSLAVRDLSNLVKPEDIITSE+
Sbjct: 121 IIDGIHGQVAKIEDDLKVRVSEYNNIRSQLNAINRKQTGSLAVRDLSNLVKPEDIITSEN 180

Query: 181 LVTLLAVVPKYSQKDWLASYETLTSYVVPRSSKLLYEDNEYALYTVTLFGRVADNFRIAA 240
           L TLLA+VPKYSQKDWL+SYETLT+YVVPRSSK LYEDNEY LYTVTLF RVADNFR +A
Sbjct: 181 LTTLLAIVPKYSQKDWLSSYETLTNYVVPRSSKKLYEDNEYVLYTVTLFSRVADNFRTSA 240

Query: 241 REKGFQIRDFEYSSEAQESRNQELEKLVHDQESLRSSLLQWCYTSYGEVCSTFLH 295
           REKGFQIRDFEYS E+ +SR QELEKLV DQESLRSSLLQWCY SYGEV S+++H
Sbjct: 241 REKGFQIRDFEYSHESYDSRKQELEKLVEDQESLRSSLLQWCYASYGEVFSSWMH 295

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356559482|ref|XP_003548028.1| PREDICTED: V-type proton ATPase subunit C-like [Glycine max]

 Score =  508 bits (1307), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 252/295 (85%), Positives = 279/295 (94%)

Query: 1   MASRYWVVSLPVQNSAASVWNRLQEQISKHSFDTPLYRFNIPNLRVGTLDSLLALSDDLV 60
           MA+RYWVVSLPVQNSA+++WN+LQEQISKHSFDTPLYRFNIPNLRVGTLDSLL+LSDDLV
Sbjct: 1   MATRYWVVSLPVQNSASTLWNKLQEQISKHSFDTPLYRFNIPNLRVGTLDSLLSLSDDLV 60

Query: 61  KSNSFVESVSHKIRRQIEELERVSGIESSSLSVDGVPVDTYLTRFVWDEAKYPTMSPLRE 120
           KSNSFVE VSHKIRRQIEELERVSG+ SS L+VDGVPVD+YLTRFVWDEA+YPTMSPL+E
Sbjct: 61  KSNSFVEGVSHKIRRQIEELERVSGVMSSGLTVDGVPVDSYLTRFVWDEARYPTMSPLKE 120

Query: 121 IVDGIHTLVAKIEDDLKVRVAEYNNVRSQLNAINRKQSGSLAVRDLSNLVKPEDIITSEH 180
           I+DGIH  VAKIEDDLKVRV+EYNN+RSQLNAINRKQ+GSLAVRDLS+LVKPEDIITSE+
Sbjct: 121 IIDGIHGQVAKIEDDLKVRVSEYNNIRSQLNAINRKQTGSLAVRDLSDLVKPEDIITSEN 180

Query: 181 LVTLLAVVPKYSQKDWLASYETLTSYVVPRSSKLLYEDNEYALYTVTLFGRVADNFRIAA 240
           L TLLA+VPKYSQKDWL+SYE LT+YVVPRSSK LYEDNEYALYTVTLF RVADNFR +A
Sbjct: 181 LTTLLAIVPKYSQKDWLSSYEILTNYVVPRSSKKLYEDNEYALYTVTLFSRVADNFRTSA 240

Query: 241 REKGFQIRDFEYSSEAQESRNQELEKLVHDQESLRSSLLQWCYTSYGEVCSTFLH 295
           RE+GFQIRDFEYS E+ +SR QELEKLV DQESLR SLLQWCYTSYGEV S+++H
Sbjct: 241 REEGFQIRDFEYSPESHDSRKQELEKLVEDQESLRGSLLQWCYTSYGEVFSSWMH 295

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|242091583|ref|XP_002441624.1| hypothetical protein SORBIDRAFT_09g030620 [Sorghum bicolor] gi|241946909|gb|EES20054.1| hypothetical protein SORBIDRAFT_09g030620 [Sorghum bicolor]

 Score =  503 bits (1294), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 235/298 (78%), Positives = 272/298 (91%), Gaps = 3/298 (1%)

Query: 1   MASRYWVVSLPVQN---SAASVWNRLQEQISKHSFDTPLYRFNIPNLRVGTLDSLLALSD 57
           MA+RYW+VSLPVQ+   +A+S+W+RLQ+ IS+HSFDTPLYRFN+P+LRVGTLDSLLALSD
Sbjct: 1   MATRYWIVSLPVQSPGATASSLWSRLQDSISRHSFDTPLYRFNVPDLRVGTLDSLLALSD 60

Query: 58  DLVKSNSFVESVSHKIRRQIEELERVSGIESSSLSVDGVPVDTYLTRFVWDEAKYPTMSP 117
           DLVKSN FVE VSHKIRRQIE+LER  G+ES +L+VDGVPVDTYLTRFVWDE KYPTMSP
Sbjct: 61  DLVKSNVFVEGVSHKIRRQIEDLERAGGVESGTLTVDGVPVDTYLTRFVWDEGKYPTMSP 120

Query: 118 LREIVDGIHTLVAKIEDDLKVRVAEYNNVRSQLNAINRKQSGSLAVRDLSNLVKPEDIIT 177
           L+EIV  I + VAKIEDD+KVR AEYNNVRSQL+AINRKQSGSLAVRDLSNLVKPED+IT
Sbjct: 121 LKEIVGSIQSQVAKIEDDMKVRAAEYNNVRSQLSAINRKQSGSLAVRDLSNLVKPEDMIT 180

Query: 178 SEHLVTLLAVVPKYSQKDWLASYETLTSYVVPRSSKLLYEDNEYALYTVTLFGRVADNFR 237
           SEHLVTLLA+VPKYSQKDWL+SYETL ++VVPRSSK LYEDNEYALYTVTLF +V DNF+
Sbjct: 181 SEHLVTLLAIVPKYSQKDWLSSYETLDTFVVPRSSKKLYEDNEYALYTVTLFAKVVDNFK 240

Query: 238 IAAREKGFQIRDFEYSSEAQESRNQELEKLVHDQESLRSSLLQWCYTSYGEVCSTFLH 295
           + AREKGFQ+RDFEYS EAQESR QE+EKL+ DQE++R++LLQWCY SY EV S+++H
Sbjct: 241 VRAREKGFQVRDFEYSPEAQESRKQEMEKLLQDQEAMRTTLLQWCYASYSEVFSSWMH 298

Source: Sorghum bicolor

Species: Sorghum bicolor

Genus: Sorghum

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|226495029|ref|NP_001147632.1| LOC100281241 [Zea mays] gi|194698790|gb|ACF83479.1| unknown [Zea mays] gi|195612692|gb|ACG28176.1| vacuolar ATP synthase subunit C [Zea mays] gi|413946711|gb|AFW79360.1| Vacuolar ATP synthase subunit C [Zea mays]

 Score =  502 bits (1292), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 236/298 (79%), Positives = 270/298 (90%), Gaps = 3/298 (1%)

Query: 1   MASRYWVVSLPVQNSAA---SVWNRLQEQISKHSFDTPLYRFNIPNLRVGTLDSLLALSD 57
           MA+RYW+VSLPVQ+  A   S+W+RLQ+ IS+HSFDTPLYRFN+P+LRVGTLDSLLALSD
Sbjct: 1   MATRYWIVSLPVQSPGAIASSLWSRLQDSISRHSFDTPLYRFNVPDLRVGTLDSLLALSD 60

Query: 58  DLVKSNSFVESVSHKIRRQIEELERVSGIESSSLSVDGVPVDTYLTRFVWDEAKYPTMSP 117
           DLVKSN FVE VSHKIRRQIE+LER  G+ES +L+VDGVPVDTYLTRFVWDE KYPTMSP
Sbjct: 61  DLVKSNVFVEGVSHKIRRQIEDLERAGGVESGTLTVDGVPVDTYLTRFVWDEGKYPTMSP 120

Query: 118 LREIVDGIHTLVAKIEDDLKVRVAEYNNVRSQLNAINRKQSGSLAVRDLSNLVKPEDIIT 177
           L+EIV  I + VAKIEDD+KVR AEYNNVRSQL+AINRKQSGSLAVRDLSNLVKPED+IT
Sbjct: 121 LKEIVGSIQSQVAKIEDDMKVRAAEYNNVRSQLSAINRKQSGSLAVRDLSNLVKPEDMIT 180

Query: 178 SEHLVTLLAVVPKYSQKDWLASYETLTSYVVPRSSKLLYEDNEYALYTVTLFGRVADNFR 237
           SEHLVTLLA+VPKYSQKDWL+SYETL ++VVPRSSK LYEDNEYALYTVTLF +V DNF+
Sbjct: 181 SEHLVTLLAIVPKYSQKDWLSSYETLDTFVVPRSSKKLYEDNEYALYTVTLFAKVVDNFK 240

Query: 238 IAAREKGFQIRDFEYSSEAQESRNQELEKLVHDQESLRSSLLQWCYTSYGEVCSTFLH 295
           + AREKGFQIRDFEYS EAQESR QE+EKL+ DQE++R++LLQWCY SY EV S+++H
Sbjct: 241 VRAREKGFQIRDFEYSPEAQESRMQEMEKLLRDQEAMRTTLLQWCYASYSEVFSSWMH 298

Source: Zea mays

Species: Zea mays

Genus: Zea

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225456459|ref|XP_002284444.1| PREDICTED: V-type proton ATPase subunit C [Vitis vinifera] gi|297734491|emb|CBI15738.3| unnamed protein product [Vitis vinifera]

 Score =  501 bits (1289), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 249/295 (84%), Positives = 278/295 (94%)

Query: 1   MASRYWVVSLPVQNSAASVWNRLQEQISKHSFDTPLYRFNIPNLRVGTLDSLLALSDDLV 60
           MA+RYWVVSLPV  SA+S+W+RLQE ISKHSFDTPLYRFN P+LRVGTLDSLL+LSDDL+
Sbjct: 1   MATRYWVVSLPVPTSASSLWSRLQESISKHSFDTPLYRFNTPDLRVGTLDSLLSLSDDLL 60

Query: 61  KSNSFVESVSHKIRRQIEELERVSGIESSSLSVDGVPVDTYLTRFVWDEAKYPTMSPLRE 120
           KSNSFVE V+HKIRRQIEELER SG ES++L+VDGVPVD+YLTRFVWDEAKYPTMSPLRE
Sbjct: 61  KSNSFVEGVTHKIRRQIEELERGSGGESNALTVDGVPVDSYLTRFVWDEAKYPTMSPLRE 120

Query: 121 IVDGIHTLVAKIEDDLKVRVAEYNNVRSQLNAINRKQSGSLAVRDLSNLVKPEDIITSEH 180
           IVDGIH  VAKIEDDLKVRVAEYNNVRSQLNAINRKQ+GSLAVRDLSNLVKPEDIITSEH
Sbjct: 121 IVDGIHVQVAKIEDDLKVRVAEYNNVRSQLNAINRKQTGSLAVRDLSNLVKPEDIITSEH 180

Query: 181 LVTLLAVVPKYSQKDWLASYETLTSYVVPRSSKLLYEDNEYALYTVTLFGRVADNFRIAA 240
           LVTLLAVVPKYSQKDWL++YETL +YVVPRSSK L+EDNEYALYTVT+FGRVADNF+ +A
Sbjct: 181 LVTLLAVVPKYSQKDWLSTYETLATYVVPRSSKKLHEDNEYALYTVTIFGRVADNFKTSA 240

Query: 241 REKGFQIRDFEYSSEAQESRNQELEKLVHDQESLRSSLLQWCYTSYGEVCSTFLH 295
           RE+GFQIRDFEYS E QESR QELEKL+ DQ+++R+SLLQWCYTSYGEV S+++H
Sbjct: 241 RERGFQIRDFEYSPETQESRKQELEKLMLDQDTIRTSLLQWCYTSYGEVFSSWMH 295

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	303
TAIR|locus:2010386	375	DET3 "DE-ETIOLATED 3" [Arabido	0.973	0.786	0.823	3.6e-128
ZFIN|ZDB-GENE-030616-612	383	atp6v1c1a "ATPase, H+ transpor	0.966	0.765	0.369	1e-52
UNIPROTKB|F1P0C1	388	ATP6V1C1 "Uncharacterized prot	0.966	0.755	0.369	7.2e-52
UNIPROTKB|E2RSK6	404	ATP6V1C1 "Uncharacterized prot	0.966	0.725	0.372	1.5e-51
UNIPROTKB|P21283	382	ATP6V1C1 "V-type proton ATPase	0.966	0.767	0.372	1.5e-51
UNIPROTKB|Q4R5H9	382	ATP6V1C1 "V-type proton ATPase	0.966	0.767	0.372	1.5e-51
UNIPROTKB|Q5RDQ7	382	ATP6V1C1 "V-type proton ATPase	0.966	0.767	0.372	1.5e-51
UNIPROTKB|P21282	382	ATP6V1C1 "V-type proton ATPase	0.966	0.767	0.369	4e-51
UNIPROTKB|F1S0R4	382	ATP6V1C1 "Uncharacterized prot	0.966	0.767	0.369	6.5e-51
MGI|MGI:1913585	382	Atp6v1c1 "ATPase, H+ transport	0.966	0.767	0.369	6.5e-51

TAIR|locus:2010386 DET3 "DE-ETIOLATED 3" [Arabidopsis thaliana (taxid:3702)]

 Score = 1258 (447.9 bits), Expect = 3.6e-128, P = 3.6e-128
 Identities = 243/295 (82%), Positives = 266/295 (90%)

Query:     1 MASRYWVVSLPVQNSAASVWNRLQEQISKHSFDTPLYRFNIPNLRVGTXXXXXXXXXXXV 60
             M SRYWVVSLPV++SA+S+WNRLQEQISKHSFDTP+YRFNIPNLRVGT           +
Sbjct:     1 MTSRYWVVSLPVKDSASSLWNRLQEQISKHSFDTPVYRFNIPNLRVGTLDSLLALGDDLL 60

Query:    61 KSNSFVESVSHKIRRQIEELERVSGIESSSLSVDGVPVDTYLTRFVWDEAKYPTMSPLRE 120
             KSNSFVE VS KIRRQIEELER+SG+ES++L+VDGVPVD+YLTRFVWDEAKYPTMSPL+E
Sbjct:    61 KSNSFVEGVSQKIRRQIEELERISGVESNALTVDGVPVDSYLTRFVWDEAKYPTMSPLKE 120

Query:   121 IVDGIHTLVAKIEDDLKVRVAEYNNVRSQLNAINRKQSGSLAVRDLSNLVKPEDIITSEH 180
             +VD I + VAKIEDDLKVRVAEYNN+R QLNAINRKQSGSLAVRDLSNLVKPEDI+ SEH
Sbjct:   121 VVDNIQSQVAKIEDDLKVRVAEYNNIRGQLNAINRKQSGSLAVRDLSNLVKPEDIVESEH 180

Query:   181 LVTLLAVVPKYSQKDWLASYETLTSYVVPRSSKLLYEDNEYALYTVTLFGRVADNFRIAA 240
             LVTLLAVVPKYSQKDWLA YETLT YVVPRSSK L+EDNEYALYTVTLF RVADNFRIAA
Sbjct:   181 LVTLLAVVPKYSQKDWLACYETLTDYVVPRSSKKLFEDNEYALYTVTLFTRVADNFRIAA 240

Query:   241 REKGFQIRDFEYSSEAQESRNQELEKLVHDQESLRSSLLQWCYTSYGEVCSTFLH 295
             REKGFQ+RDFE S EAQE+R QEL KLV DQESLRSSLLQWCYTSYGEV S+++H
Sbjct:   241 REKGFQVRDFEQSVEAQETRKQELAKLVQDQESLRSSLLQWCYTSYGEVFSSWMH 295

GO:0015991 "ATP hydrolysis coupled proton transport" evidence=IEA

GO:0016820 "hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances" evidence=IEA

GO:0000221 "vacuolar proton-transporting V-type ATPase, V1 domain" evidence=IDA

GO:0005886 "plasma membrane" evidence=IDA

GO:0009826 "unidimensional cell growth" evidence=IMP

GO:0046961 "proton-transporting ATPase activity, rotational mechanism" evidence=IGI

GO:0005773 "vacuole" evidence=IDA

GO:0009809 "lignin biosynthetic process" evidence=IGI

GO:0043255 "regulation of carbohydrate biosynthetic process" evidence=IGI

GO:0000325 "plant-type vacuole" evidence=IDA

GO:0005774 "vacuolar membrane" evidence=IDA

GO:0009507 "chloroplast" evidence=IDA

GO:0005829 "cytosol" evidence=RCA

GO:0005794 "Golgi apparatus" evidence=IDA

GO:0000902 "cell morphogenesis" evidence=RCA

GO:0006007 "glucose catabolic process" evidence=RCA

GO:0006511 "ubiquitin-dependent protein catabolic process" evidence=RCA

GO:0006816 "calcium ion transport" evidence=RCA

GO:0007030 "Golgi organization" evidence=RCA

GO:0007033 "vacuole organization" evidence=RCA

GO:0009651 "response to salt stress" evidence=RCA

GO:0009853 "photorespiration" evidence=RCA

GO:0009932 "cell tip growth" evidence=RCA

GO:0016049 "cell growth" evidence=RCA

GO:0016051 "carbohydrate biosynthetic process" evidence=RCA

GO:0030243 "cellulose metabolic process" evidence=RCA

GO:0048193 "Golgi vesicle transport" evidence=RCA

GO:0048765 "root hair cell differentiation" evidence=RCA

GO:0051788 "response to misfolded protein" evidence=RCA

GO:0080129 "proteasome core complex assembly" evidence=RCA

ZFIN|ZDB-GENE-030616-612 atp6v1c1a "ATPase, H+ transporting, lysosomal, V1 subunit C, isoform 1a" [Danio rerio (taxid:7955)]

 Score = 546 (197.3 bits), Expect = 1.0e-52, P = 1.0e-52
 Identities = 109/295 (36%), Positives = 178/295 (60%)

Query:     3 SRYWVVSLPVQNSAASVWNRLQEQISKHSFDTPLYRFNIPNLRVGTXXXXXXXXXXXVKS 62
             + +W++S P + +    W++L    ++ +  +   +FNIP+L+VGT            K 
Sbjct:     2 TEFWLISAPGEKTCQQTWDKLMTATTRTNNLSTNNKFNIPDLKVGTLDVLVGLSDELAKL 61

Query:    63 NSFVESVSHKIRRQIEE-LERVSGIESSSLSVDGVPVDTYLTRFVWDEAKYPTMSPLREI 121
             ++FVESV  K+ + + + LE        +L  +GV + TY+TRF WD AKYP    L+ I
Sbjct:    62 DAFVESVVKKVAQYMADVLEDSRDKVQENLLANGVDLVTYVTRFQWDMAKYPIKQSLKNI 121

Query:   122 VDGIHTLVAKIEDDLKVRVAEYNNVRSQLNAINRKQSGSLAVRDLSNLVKPED-IITSEH 180
              + I   V++I++DLK R + YNN++  L  + RK +GSL  R L+++VK +D ++ SE+
Sbjct:   122 SEIISKQVSQIDNDLKARASAYNNLKGNLQNLERKNAGSLLTRSLADIVKKDDFVLDSEY 181

Query:   181 LVTLLAVVPKYSQKDWLASYETLTSYVVPRSSKLLYEDNEYALYTVTLFGRVADNFRIAA 240
             L+TLL VVPK +  DW  +YETL   VVPRS+ LL+ED++  L+TVTLF +  D+FR  A
Sbjct:   182 LITLLVVVPKTNYTDWQRTYETLAEMVVPRSTNLLFEDHDSGLFTVTLFRKAIDDFRHKA 241

Query:   241 REKGFQIRDFEYSSEAQESRNQELEKLVHDQESLRSSLLQWCYTSYGEVCSTFLH 295
             RE  F +RDF+Y+ E  ++  +E+ +L  D++     L++W   ++ E    ++H
Sbjct:   242 RENKFTVRDFQYNEEEMKADKEEMTRLSTDKKKQFGPLVRWLKVNFSEAFIAWVH 296

GO:0015078 "hydrogen ion transmembrane transporter activity" evidence=IEA

GO:0015991 "ATP hydrolysis coupled proton transport" evidence=IEA

GO:0033180 "proton-transporting V-type ATPase, V1 domain" evidence=IEA

GO:0006811 "ion transport" evidence=IEA

GO:0015992 "proton transport" evidence=IEA

GO:0006810 "transport" evidence=IEA

UNIPROTKB|F1P0C1 ATP6V1C1 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 538 (194.4 bits), Expect = 7.2e-52, P = 7.2e-52
 Identities = 109/295 (36%), Positives = 174/295 (58%)

Query:     3 SRYWVVSLPVQNSAASVWNRLQEQISKHSFDTPLYRFNIPNLRVGTXXXXXXXXXXXVKS 62
             + +W++S P + +    W +L    +K++  +   +FNIP+L+VGT            K 
Sbjct:     8 TEFWLISAPGEKTCQQTWEKLHAATTKNNNLSTNSKFNIPDLKVGTLDVLVGLSDELAKL 67

Query:    63 NSFVESVSHKIRRQIEE-LERVSGIESSSLSVDGVPVDTYLTRFVWDEAKYPTMSPLREI 121
             ++FVESV  K+ + + + LE        +L  +GV + TY+TRF WD AKYP    L+ I
Sbjct:    68 DAFVESVVKKVAQYMADVLEDSKDKVQENLLANGVDLVTYITRFQWDMAKYPIKQSLKNI 127

Query:   122 VDGIHTLVAKIEDDLKVRVAEYNNVRSQLNAINRKQSGSLAVRDLSNLVKPED-IITSEH 180
              + I   V +I++DLK R + YNN++  L  + RK +GSL  R L+++VK ED ++ SE+
Sbjct:   128 SEIIAKGVNQIDNDLKARASAYNNLKGNLQNLERKNAGSLLTRSLADIVKKEDFVLDSEY 187

Query:   181 LVTLLAVVPKYSQKDWLASYETLTSYVVPRSSKLLYEDNEYALYTVTLFGRVADNFRIAA 240
             LVTLL +VPK +  DW+  YETL   VVPRSS +L+ED +  L  VTLF +  D+F+  A
Sbjct:   188 LVTLLVIVPKVNYNDWVKQYETLAEMVVPRSSNVLFEDQDSYLCNVTLFRKAVDDFKHKA 247

Query:   241 REKGFQIRDFEYSSEAQESRNQELEKLVHDQESLRSSLLQWCYTSYGEVCSTFLH 295
             RE  F +RDF+Y+ E  ++  +E+ +L  D++     L++W   ++ E    ++H
Sbjct:   248 REYKFLVRDFQYNEEEMKADKEEMNRLSTDKKKQFGPLVRWLKVNFSEAFIAWIH 302

GO:0015078 "hydrogen ion transmembrane transporter activity" evidence=IEA

GO:0015991 "ATP hydrolysis coupled proton transport" evidence=IEA

GO:0033180 "proton-transporting V-type ATPase, V1 domain" evidence=IEA

UNIPROTKB|E2RSK6 ATP6V1C1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 535 (193.4 bits), Expect = 1.5e-51, P = 1.5e-51
 Identities = 110/295 (37%), Positives = 170/295 (57%)

Query:     3 SRYWVVSLPVQNSAASVWNRLQEQISKHSFDTPLYRFNIPNLRVGTXXXXXXXXXXXVKS 62
             + +W++S P + +    W +L    SK++      +FNIP+L+VGT            K 
Sbjct:     2 TEFWLISAPGEKTCQQTWEKLHAATSKNNNLAVASKFNIPDLKVGTLDVLVGLSDELAKL 61

Query:    63 NSFVESVSHKIRRQIEE-LERVSGIESSSLSVDGVPVDTYLTRFVWDEAKYPTMSPLREI 121
             ++FVE V  K+ + + + LE        +L  +GV + TY+TRF WD AKYP    L+ I
Sbjct:    62 DAFVEGVVKKVAQYMADVLEDSKDKVQENLLANGVDLVTYITRFQWDMAKYPIKQSLKNI 121

Query:   122 VDGIHTLVAKIEDDLKVRVAEYNNVRSQLNAINRKQSGSLAVRDLSNLVKPED-IITSEH 180
              + I   V +I++DLK R + YNN++  L  + RK +GSL  R L+ +VK +D ++ SE+
Sbjct:   122 SEIIAKGVTQIDNDLKSRASAYNNLKGNLQNLERKNAGSLLTRSLAEIVKKDDFVLDSEY 181

Query:   181 LVTLLAVVPKYSQKDWLASYETLTSYVVPRSSKLLYEDNEYALYTVTLFGRVADNFRIAA 240
             LVTLL VVPK +  DW+  YETL   VVPRSS +L ED +  L  VTLF +  D+FR  A
Sbjct:   182 LVTLLVVVPKLNHNDWIKQYETLAEMVVPRSSNVLSEDQDSYLCNVTLFRKAVDDFRHKA 241

Query:   241 REKGFQIRDFEYSSEAQESRNQELEKLVHDQESLRSSLLQWCYTSYGEVCSTFLH 295
             RE  F +RDF+Y+ E  ++  +E+ +L  D++     L++W   ++ E    ++H
Sbjct:   242 RENKFIVRDFQYNEEEMKADKEEMNRLSTDKKKQFGPLVRWLKVNFSEAFIAWIH 296

GO:0033180 "proton-transporting V-type ATPase, V1 domain" evidence=IEA

GO:0015991 "ATP hydrolysis coupled proton transport" evidence=IEA

GO:0015078 "hydrogen ion transmembrane transporter activity" evidence=IEA

UNIPROTKB|P21283 ATP6V1C1 "V-type proton ATPase subunit C 1" [Homo sapiens (taxid:9606)]

 Score = 535 (193.4 bits), Expect = 1.5e-51, P = 1.5e-51
 Identities = 110/295 (37%), Positives = 170/295 (57%)

Query:     3 SRYWVVSLPVQNSAASVWNRLQEQISKHSFDTPLYRFNIPNLRVGTXXXXXXXXXXXVKS 62
             + +W++S P + +    W +L    SK++      +FNIP+L+VGT            K 
Sbjct:     2 TEFWLISAPGEKTCQQTWEKLHAATSKNNNLAVTSKFNIPDLKVGTLDVLVGLSDELAKL 61

Query:    63 NSFVESVSHKIRRQIEE-LERVSGIESSSLSVDGVPVDTYLTRFVWDEAKYPTMSPLREI 121
             ++FVE V  K+ + + + LE        +L  +GV + TY+TRF WD AKYP    L+ I
Sbjct:    62 DAFVEGVVKKVAQYMADVLEDSKDKVQENLLANGVDLVTYITRFQWDMAKYPIKQSLKNI 121

Query:   122 VDGIHTLVAKIEDDLKVRVAEYNNVRSQLNAINRKQSGSLAVRDLSNLVKPED-IITSEH 180
              + I   V +I++DLK R + YNN++  L  + RK +GSL  R L+ +VK +D ++ SE+
Sbjct:   122 SEIIAKGVTQIDNDLKSRASAYNNLKGNLQNLERKNAGSLLTRSLAEIVKKDDFVLDSEY 181

Query:   181 LVTLLAVVPKYSQKDWLASYETLTSYVVPRSSKLLYEDNEYALYTVTLFGRVADNFRIAA 240
             LVTLL VVPK +  DW+  YETL   VVPRSS +L ED +  L  VTLF +  D+FR  A
Sbjct:   182 LVTLLVVVPKLNHNDWIKQYETLAEMVVPRSSNVLSEDQDSYLCNVTLFRKAVDDFRHKA 241

Query:   241 REKGFQIRDFEYSSEAQESRNQELEKLVHDQESLRSSLLQWCYTSYGEVCSTFLH 295
             RE  F +RDF+Y+ E  ++  +E+ +L  D++     L++W   ++ E    ++H
Sbjct:   242 RENKFIVRDFQYNEEEMKADKEEMNRLSTDKKKQFGPLVRWLKVNFSEAFIAWIH 296

GO:0015991 "ATP hydrolysis coupled proton transport" evidence=IEA

GO:0033180 "proton-transporting V-type ATPase, V1 domain" evidence=IEA

GO:0008553 "hydrogen-exporting ATPase activity, phosphorylative mechanism" evidence=IEA

GO:0031410 "cytoplasmic vesicle" evidence=IEA

GO:0045177 "apical part of cell" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISS

GO:0046961 "proton-transporting ATPase activity, rotational mechanism" evidence=TAS

GO:0005215 "transporter activity" evidence=NAS

GO:0015992 "proton transport" evidence=TAS

GO:0016469 "proton-transporting two-sector ATPase complex" evidence=TAS

GO:0005829 "cytosol" evidence=TAS

GO:0006879 "cellular iron ion homeostasis" evidence=TAS

GO:0008286 "insulin receptor signaling pathway" evidence=TAS

GO:0033572 "transferrin transport" evidence=TAS

GO:0051701 "interaction with host" evidence=TAS

GO:0055085 "transmembrane transport" evidence=TAS

GO:0090382 "phagosome maturation" evidence=TAS

GO:0005515 "protein binding" evidence=IPI

UNIPROTKB|Q4R5H9 ATP6V1C1 "V-type proton ATPase subunit C 1" [Macaca fascicularis (taxid:9541)]

 Score = 535 (193.4 bits), Expect = 1.5e-51, P = 1.5e-51
 Identities = 110/295 (37%), Positives = 170/295 (57%)

Query:     3 SRYWVVSLPVQNSAASVWNRLQEQISKHSFDTPLYRFNIPNLRVGTXXXXXXXXXXXVKS 62
             + +W++S P + +    W +L    SK++      +FNIP+L+VGT            K 
Sbjct:     2 TEFWLISAPGEKTCQQTWEKLHAATSKNNNLAVTSKFNIPDLKVGTLDVLVGLSDELAKL 61

Query:    63 NSFVESVSHKIRRQIEE-LERVSGIESSSLSVDGVPVDTYLTRFVWDEAKYPTMSPLREI 121
             ++FVE V  K+ + + + LE        +L  +GV + TY+TRF WD AKYP    L+ I
Sbjct:    62 DAFVEGVVKKVAQYMADVLEDSKDKVQENLLANGVDLVTYITRFQWDMAKYPIKQSLKNI 121

Query:   122 VDGIHTLVAKIEDDLKVRVAEYNNVRSQLNAINRKQSGSLAVRDLSNLVKPED-IITSEH 180
              + I   V +I++DLK R + YNN++  L  + RK +GSL  R L+ +VK +D ++ SE+
Sbjct:   122 SEIIAKGVTQIDNDLKSRASAYNNLKGNLQNLERKNAGSLLTRSLAEIVKKDDFVLDSEY 181

Query:   181 LVTLLAVVPKYSQKDWLASYETLTSYVVPRSSKLLYEDNEYALYTVTLFGRVADNFRIAA 240
             LVTLL VVPK +  DW+  YETL   VVPRSS +L ED +  L  VTLF +  D+FR  A
Sbjct:   182 LVTLLVVVPKLNHNDWIKQYETLAEMVVPRSSNVLSEDQDSYLCNVTLFRKAVDDFRHKA 241

Query:   241 REKGFQIRDFEYSSEAQESRNQELEKLVHDQESLRSSLLQWCYTSYGEVCSTFLH 295
             RE  F +RDF+Y+ E  ++  +E+ +L  D++     L++W   ++ E    ++H
Sbjct:   242 RENKFIVRDFQYNEEEMKADKEEMNRLSTDKKKQFGPLVRWLKVNFSEAFIAWIH 296

GO:0005886 "plasma membrane" evidence=ISS

UNIPROTKB|Q5RDQ7 ATP6V1C1 "V-type proton ATPase subunit C 1" [Pongo abelii (taxid:9601)]

 Score = 535 (193.4 bits), Expect = 1.5e-51, P = 1.5e-51
 Identities = 110/295 (37%), Positives = 170/295 (57%)

Query:     3 SRYWVVSLPVQNSAASVWNRLQEQISKHSFDTPLYRFNIPNLRVGTXXXXXXXXXXXVKS 62
             + +W++S P + +    W +L    SK++      +FNIP+L+VGT            K 
Sbjct:     2 TEFWLISAPGEKTCQQTWEKLHAATSKNNNLAVTSKFNIPDLKVGTLDVLVGLSDELAKL 61

Query:    63 NSFVESVSHKIRRQIEE-LERVSGIESSSLSVDGVPVDTYLTRFVWDEAKYPTMSPLREI 121
             ++FVE V  K+ + + + LE        +L  +GV + TY+TRF WD AKYP    L+ I
Sbjct:    62 DAFVEGVVKKVAQYMADVLEDSKDKVQENLLANGVDLVTYITRFQWDMAKYPIKQSLKNI 121

Query:   122 VDGIHTLVAKIEDDLKVRVAEYNNVRSQLNAINRKQSGSLAVRDLSNLVKPED-IITSEH 180
              + I   V +I++DLK R + YNN++  L  + RK +GSL  R L+ +VK +D ++ SE+
Sbjct:   122 SEIIAKGVTQIDNDLKSRASAYNNLKGNLQNLERKNAGSLLTRSLAEIVKKDDFVLDSEY 181

Query:   181 LVTLLAVVPKYSQKDWLASYETLTSYVVPRSSKLLYEDNEYALYTVTLFGRVADNFRIAA 240
             LVTLL VVPK +  DW+  YETL   VVPRSS +L ED +  L  VTLF +  D+FR  A
Sbjct:   182 LVTLLVVVPKLNHNDWIKQYETLAEMVVPRSSNVLSEDQDSYLCNVTLFRKAVDDFRHKA 241

Query:   241 REKGFQIRDFEYSSEAQESRNQELEKLVHDQESLRSSLLQWCYTSYGEVCSTFLH 295
             RE  F +RDF+Y+ E  ++  +E+ +L  D++     L++W   ++ E    ++H
Sbjct:   242 RENKFIVRDFQYNEEEMKADKEEMNRLSTDKKKQFGPLVRWLKVNFSEAFIAWIH 296

GO:0005886 "plasma membrane" evidence=ISS

UNIPROTKB|P21282 ATP6V1C1 "V-type proton ATPase subunit C 1" [Bos taurus (taxid:9913)]

 Score = 531 (192.0 bits), Expect = 4.0e-51, P = 4.0e-51
 Identities = 109/295 (36%), Positives = 170/295 (57%)

Query:     3 SRYWVVSLPVQNSAASVWNRLQEQISKHSFDTPLYRFNIPNLRVGTXXXXXXXXXXXVKS 62
             + +W++S P + +    W +L    +K++      +FNIP+L+VGT            K 
Sbjct:     2 TEFWLISAPGEKTCQQTWEKLHAATTKNNNLAVSSKFNIPDLKVGTLDVLVGLSDELAKL 61

Query:    63 NSFVESVSHKIRRQIEE-LERVSGIESSSLSVDGVPVDTYLTRFVWDEAKYPTMSPLREI 121
             ++FVE V  K+ + + + LE        +L  +GV + TY+TRF WD AKYP    L+ I
Sbjct:    62 DAFVEGVVKKVAQYMADVLEDSKDKVQENLLANGVDLVTYITRFQWDMAKYPIKQSLKNI 121

Query:   122 VDGIHTLVAKIEDDLKVRVAEYNNVRSQLNAINRKQSGSLAVRDLSNLVKPED-IITSEH 180
              + I   V +I++DLK R + YNN++  L  + RK +GSL  R L+ +VK +D ++ SE+
Sbjct:   122 SEIIAKGVTQIDNDLKSRASAYNNLKGNLQNLERKNAGSLLTRSLAEIVKKDDFVLDSEY 181

Query:   181 LVTLLAVVPKYSQKDWLASYETLTSYVVPRSSKLLYEDNEYALYTVTLFGRVADNFRIAA 240
             LVTLL VVPK +  DW+  YETL   VVPRSS +L ED +  L  VTLF +  D+FR  A
Sbjct:   182 LVTLLVVVPKLNHNDWIKQYETLAEMVVPRSSNVLSEDQDSYLCNVTLFRKAVDDFRHKA 241

Query:   241 REKGFQIRDFEYSSEAQESRNQELEKLVHDQESLRSSLLQWCYTSYGEVCSTFLH 295
             RE  F +RDF+Y+ E  ++  +E+ +L  D++     L++W   ++ E    ++H
Sbjct:   242 RENKFIVRDFQYNEEEMKADKEEMNRLSTDKKKQFGPLVRWLKVNFSEAFIAWIH 296

GO:0005886 "plasma membrane" evidence=ISS

GO:0008553 "hydrogen-exporting ATPase activity, phosphorylative mechanism" evidence=IEA

GO:0033180 "proton-transporting V-type ATPase, V1 domain" evidence=IEA

GO:0015991 "ATP hydrolysis coupled proton transport" evidence=IEA

UNIPROTKB|F1S0R4 ATP6V1C1 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 529 (191.3 bits), Expect = 6.5e-51, P = 6.5e-51
 Identities = 109/295 (36%), Positives = 170/295 (57%)

Query:     3 SRYWVVSLPVQNSAASVWNRLQEQISKHSFDTPLYRFNIPNLRVGTXXXXXXXXXXXVKS 62
             + +W++S P + +    W +L    +K++      +FNIP+L+VGT            K 
Sbjct:     2 TEFWLISAPGEKTCQQTWEKLHAATTKNNNLALTSKFNIPDLKVGTLDVLVGLSDELAKL 61

Query:    63 NSFVESVSHKIRRQIEE-LERVSGIESSSLSVDGVPVDTYLTRFVWDEAKYPTMSPLREI 121
             ++FVE V  K+ + + + LE        +L  +GV + TY+TRF WD AKYP    L+ I
Sbjct:    62 DAFVEGVVKKVAQYMADVLEDSRDKVQENLLANGVDLVTYITRFQWDMAKYPIKQSLKNI 121

Query:   122 VDGIHTLVAKIEDDLKVRVAEYNNVRSQLNAINRKQSGSLAVRDLSNLVKPED-IITSEH 180
              + I   V +I++DLK R + YNN++  L  + RK +GSL  R L+ +VK +D ++ SE+
Sbjct:   122 SEIIAKGVTQIDNDLKSRASAYNNLKGNLQNLERKNAGSLLTRSLAEIVKKDDFVLDSEY 181

Query:   181 LVTLLAVVPKYSQKDWLASYETLTSYVVPRSSKLLYEDNEYALYTVTLFGRVADNFRIAA 240
             LVTLL VVPK +  DW+  YETL   VVPRSS +L ED +  L  VTLF +  D+FR  A
Sbjct:   182 LVTLLVVVPKLNHHDWIKQYETLAEMVVPRSSNVLSEDQDSYLCNVTLFRKAVDDFRHKA 241

Query:   241 REKGFQIRDFEYSSEAQESRNQELEKLVHDQESLRSSLLQWCYTSYGEVCSTFLH 295
             RE  F +RDF+Y+ E  ++  +E+ +L  D++     L++W   ++ E    ++H
Sbjct:   242 RENKFIVRDFQYNEEEMKADKEEMNRLSTDKKKQFGPLVRWLKVNFSEAFIAWIH 296

GO:0008553 "hydrogen-exporting ATPase activity, phosphorylative mechanism" evidence=IEA

GO:0005886 "plasma membrane" evidence=IEA

GO:0033180 "proton-transporting V-type ATPase, V1 domain" evidence=IEA

GO:0015991 "ATP hydrolysis coupled proton transport" evidence=IEA

MGI|MGI:1913585 Atp6v1c1 "ATPase, H+ transporting, lysosomal V1 subunit C1" [Mus musculus (taxid:10090)]

 Score = 529 (191.3 bits), Expect = 6.5e-51, P = 6.5e-51
 Identities = 109/295 (36%), Positives = 169/295 (57%)

Query:     3 SRYWVVSLPVQNSAASVWNRLQEQISKHSFDTPLYRFNIPNLRVGTXXXXXXXXXXXVKS 62
             + +W++S P + +    W +L    +K++      +FNIP+L+VGT            K 
Sbjct:     2 TEFWLISAPGEKTCQQTWEKLHAATTKNNNLAVSSKFNIPDLKVGTLDVLVGLSDELAKL 61

Query:    63 NSFVESVSHKIRRQIEE-LERVSGIESSSLSVDGVPVDTYLTRFVWDEAKYPTMSPLREI 121
             ++FVE V  K+ + + + LE        +L   GV + TY+TRF WD AKYP    L+ I
Sbjct:    62 DAFVEGVVKKVAQYMADVLEDSKDKVQENLLASGVDLVTYITRFQWDMAKYPIKQSLKNI 121

Query:   122 VDGIHTLVAKIEDDLKVRVAEYNNVRSQLNAINRKQSGSLAVRDLSNLVKPED-IITSEH 180
              + I   V +I++DLK R + YNN++  L  + RK +GSL  R L+ +VK +D ++ SE+
Sbjct:   122 SEIIAKGVTQIDNDLKSRASAYNNLKGNLQNLERKNAGSLLTRSLAEIVKKDDFVLDSEY 181

Query:   181 LVTLLAVVPKYSQKDWLASYETLTSYVVPRSSKLLYEDNEYALYTVTLFGRVADNFRIAA 240
             LVTLL VVPK +  DW+  YETL   VVPRSS +L ED +  L  VTLF +  D+FR  A
Sbjct:   182 LVTLLVVVPKLNHNDWIKQYETLAEMVVPRSSNVLSEDQDSYLCNVTLFRKAVDDFRHKA 241

Query:   241 REKGFQIRDFEYSSEAQESRNQELEKLVHDQESLRSSLLQWCYTSYGEVCSTFLH 295
             RE  F +RDF+Y+ E  ++  +E+ +L  D++     L++W   ++ E    ++H
Sbjct:   242 RENKFIVRDFQYNEEEMKADKEEMTRLSTDKKKQFGPLVRWLKVNFSEAFIAWIH 296

GO:0005737 "cytoplasm" evidence=ISO

GO:0005886 "plasma membrane" evidence=IDA

GO:0006200 "ATP catabolic process" evidence=IDA

GO:0006810 "transport" evidence=IEA

GO:0006811 "ion transport" evidence=IEA

GO:0008553 "hydrogen-exporting ATPase activity, phosphorylative mechanism" evidence=IDA

GO:0015078 "hydrogen ion transmembrane transporter activity" evidence=IEA

GO:0015991 "ATP hydrolysis coupled proton transport" evidence=IEA

GO:0015992 "proton transport" evidence=IDA

GO:0031410 "cytoplasmic vesicle" evidence=ISO

GO:0033180 "proton-transporting V-type ATPase, V1 domain" evidence=IEA

GO:0034220 "ion transmembrane transport" evidence=IDA

GO:0045177 "apical part of cell" evidence=ISO

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q9SDS7	VATC_ARATH	No assigned EC number	0.8576	0.9735	0.7866	yes	no
Q9SCB9	VATC_HORVU	No assigned EC number	0.7482	0.9141	0.7824	N/A	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input:
	fgenesh2_kg.1__1392__AT1G12840.1	annotation not avaliable (378 aa)
		(Arabidopsis lyrata)
Predicted Functional Partners:
	fgenesh2_kg.2__2185__AT1G78900.1	annotation not avaliable (623 aa)				•	•	•	•		0.927
	scaffold_503059.1	annotation not avaliable (261 aa)				•	•	•	•		0.921
	fgenesh2_kg.7__1929__AT4G23710.1	annotation not avaliable (106 aa)				•	•	•	•		0.743
	fgenesh1_pm.C_scaffold_6002760	annotation not avaliable (128 aa)				•	•	•	•		0.727
	scaffold_700725.1	At3g42050-S (418 aa)				•		•	•		0.658
	fgenesh2_kg.7__109__AT4G39080.1	annotation not avaliable (820 aa)					•	•	•		0.613
	fgenesh2_kg.4__67__AT2G21410.1	annotation not avaliable (819 aa)					•	•	•		0.611
	scaffold_401298.1	annotation not avaliable (822 aa)					•	•	•		0.594
	fgenesh2_kg.6__3087__AT4G11150.1	annotation not avaliable (230 aa)				•	•	•	•		0.589
	fgenesh2_kg.8__93__AT5G47030.1	annotation not avaliable (203 aa)				•		•	•		0.578

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	303
pfam03223	371	pfam03223, V-ATPase_C, V-ATPase subunit C	1e-126
COG5127	383	COG5127, COG5127, Vacuolar H+-ATPase V1 sector, su	4e-49

>gnl|CDD|217433 pfam03223, V-ATPase_C, V-ATPase subunit C

 Score =  364 bits (936), Expect = e-126
 Identities = 144/296 (48%), Positives = 201/296 (67%), Gaps = 5/296 (1%)

Query: 5   YWVVSLPVQNS---AASVWNRLQEQISKHSFDTPLYRFNIPNLRVGTLDSLLALSDDLVK 61
           YW+VSLPV  +   A  +W  L    S  S  + + +FNIP+L+VGTLDSL+ LSD+L K
Sbjct: 1   YWLVSLPVLKTDSQANQIWKELLLVSSLGSNLSNVSKFNIPDLKVGTLDSLVTLSDELGK 60

Query: 62  SNSFVESVSHKIRRQIEEL-ERVSGIESSSLSVDGVPVDTYLTRFVWDEAKYPTMSPLRE 120
            ++ VE V  KI R + EL E   G  SS+L V+ V +D YLTRF WD AKYPT   L+E
Sbjct: 61  LDTQVEGVLKKIERILRELLEDQGGKLSSTLRVNDVSLDQYLTRFQWDSAKYPTKQSLKE 120

Query: 121 IVDGIHTLVAKIEDDLKVRVAEYNNVRSQLNAINRKQSGSLAVRDLSNLVKPEDII-TSE 179
           +VD +   VA+I++DL+ + AEYNN +S L A+ RKQ+G+L+VR L+++VKPED +  SE
Sbjct: 121 LVDLLSKEVAQIDNDLRSKSAEYNNAKSNLAALERKQTGNLSVRSLADIVKPEDFVLDSE 180

Query: 180 HLVTLLAVVPKYSQKDWLASYETLTSYVVPRSSKLLYEDNEYALYTVTLFGRVADNFRIA 239
           +L T+L  VPK S KD+LASYETL+  VVPRS+K++ ED+EYAL+TVTLF +V ++F+  
Sbjct: 181 YLTTVLVAVPKNSVKDFLASYETLSDMVVPRSAKVIAEDDEYALFTVTLFKKVVEDFKTK 240

Query: 240 AREKGFQIRDFEYSSEAQESRNQELEKLVHDQESLRSSLLQWCYTSYGEVCSTFLH 295
            REK F +RDF+YS E  E   +E  KL  D++    +LL+    ++ EV   ++H
Sbjct: 241 CREKKFIVRDFKYSEELSEEEKRERTKLATDEKKQEGALLRLLRVAFSEVFIAWIH 296

Length = 371

>gnl|CDD|227456 COG5127, COG5127, Vacuolar H+-ATPase V1 sector, subunit C [Energy production and conversion]

 Score =  167 bits (424), Expect = 4e-49
 Identities = 73/297 (24%), Positives = 136/297 (45%), Gaps = 7/297 (2%)

Query: 2   ASRYWVVSLPV--QNSAASVWNRLQEQISKHSFDTPLYRFNIPNLRVGTLDSLLALSDDL 59
            S + +VSLPV    S      ++ +     S  +    F +P+ +  +LD L+  S+ L
Sbjct: 3   KSDFILVSLPVEEDGSRPDED-QIWDLYGGRSTVSR---FLLPSFKGVSLDGLINQSERL 58

Query: 60  VKSNSFVESVSHKIRRQIEELERVSGIESSSLSVDGVPVDTYLTRFVWDEAKYPTMSPLR 119
            K +   E    KI +      R S  +     +       Y   F WD   + T   + 
Sbjct: 59  GKLDKQCEGAISKILKIFMGYCRSSNGDRVGKGIVYGSTPEYGDFFEWDRQSFVTNKSIE 118

Query: 120 EIVDGIHTLVAKIEDDLKVRVAEYNNVRSQLNAINRKQSGSLAVRDLSNLVKPEDII-TS 178
           + +  I     +I  D + +  E++  + +   + RK  GSL+   L  +V+ ED++  S
Sbjct: 119 KAILLIDGEYRRISKDYREKAEEFDGAKRECEKLQRKTRGSLSDISLGIIVEREDVVEGS 178

Query: 179 EHLVTLLAVVPKYSQKDWLASYETLTSYVVPRSSKLLYEDNEYALYTVTLFGRVADNFRI 238
           E L  +   VPK    ++  SYETL+ +V P S++ +  D EY L+ V +F +  ++FR 
Sbjct: 179 EFLTVVYVAVPKALVPEFNRSYETLSPHVSPDSAEKVNSDEEYVLFKVYVFKKGEEDFRT 238

Query: 239 AAREKGFQIRDFEYSSEAQESRNQELEKLVHDQESLRSSLLQWCYTSYGEVCSTFLH 295
            ARE+ F +R+F+ +    E    E ++    + ++   L+++ + +  EV   ++H
Sbjct: 239 MAREEKFMVREFDKNMVLSEEMIAERDRAAEKESAMEKILMRFAHVALTEVFRIWIH 295

Length = 383

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	303
PF03223	371	V-ATPase_C: V-ATPase subunit C; InterPro: IPR00490	100.0
KOG2909	381	consensus Vacuolar H+-ATPase V1 sector, subunit C	100.0
COG5127	383	Vacuolar H+-ATPase V1 sector, subunit C [Energy pr	100.0
PRK05771	646	V-type ATP synthase subunit I; Validated	96.34
PF01496	759	V_ATPase_I: V-type ATPase 116kDa subunit family ;	90.95

>PF03223 V-ATPase_C: V-ATPase subunit C; InterPro: IPR004907 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane

Probab=100.00  E-value=6.2e-105  Score=771.17  Aligned_cols=296  Identities=50%  Similarity=0.812  Sum_probs=246.8

Q ss_pred             EEEEeecCCCChHHH-HHHHHHHhccCCCCCCcccccCCCCCCCChhhhHhhhhhhHhhhhhHHHHHHHHHHHHHHhhcc
Q 022080            5 YWVVSLPVQNSAASV-WNRLQEQISKHSFDTPLYRFNIPNLRVGTLDSLLALSDDLVKSNSFVESVSHKIRRQIEELERV   83 (303)
Q Consensus         5 ~wLvs~P~~~~~~~~-~~~L~~~l~~~~~~~~~~~f~iP~fKvGTLDsLv~lsDeL~K~D~~~e~~v~Ki~~~~~~l~~~   83 (303)
                      |||||+|+++++++. |+.|+..++..+..+++++|+||+||+||||+||+|||||+|+|++||++++||++++++++++
T Consensus         1 ywLvs~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~f~IP~lKvgTLDsLv~lsDeL~KlD~~~e~~~~Ki~~~~~~l~~~   80 (371)
T PF03223_consen    1 YWLVSLPNEKSSQQSIWEKLQLVTSKSNNLSTVSKFNIPDLKVGTLDSLVQLSDELAKLDSFVESVVRKIERQLRDLLEG   80 (371)
T ss_dssp             EEEEEEETT---TTS--HHHHHHHTGGGGTSEEEE------B-S-GGGHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-TS
T ss_pred             CEEEECCCCCCCcchHHHHHHHHhhccCCCCceeeecCCcCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence            899999997666554 9999998866666788999999999999999999999999999999999999999999999875


Q ss_pred             -ccccccceeeCCCChhhhhcccccccccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCcc
Q 022080           84 -SGIESSSLSVDGVPVDTYLTRFVWDEAKYPTMSPLREIVDGIHTLVAKIEDDLKVRVAEYNNVRSQLNAINRKQSGSLA  162 (303)
Q Consensus        84 -~~~~~~~l~v~~~~~~~yl~~F~Wd~aKyp~~~~l~el~~~i~~~v~~id~dlk~k~~~Yn~~K~~l~~l~RK~~GnL~  162 (303)
                       +++..+++.+||+|+++||++|+||++|||+++||+||+++|++++++||+|+|+|+++||++|++|++++||++|||+
T Consensus        81 ~~~~~~~~l~v~~~~~~~yl~~F~Wd~aKy~~~~~l~el~~~i~~~v~~id~dlk~k~~~Yn~~K~~l~~~~RK~~GnL~  160 (371)
T PF03223_consen   81 DKDKLQENLLVNGVSLEQYLTRFQWDDAKYPTRRPLKELVDIISKEVSQIDNDLKSKSSAYNNAKSNLQALERKQTGNLS  160 (371)
T ss_dssp             S-SSS--S--BTTB-HHHHHHT----TTTS-TTSBHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-S-TT
T ss_pred             cccceeeEEEECCCcHHHHHHHheehhhcCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCccc
Confidence             5567899999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cccCcCCCCCCCcc-ccCCceEEEEEecCCChHHHHHHhccccCccccCCcccccccCCeeEEEEEEecccHHHHHHHHH
Q 022080          163 VRDLSNLVKPEDII-TSEHLVTLLAVVPKYSQKDWLASYETLTSYVVPRSSKLLYEDNEYALYTVTLFGRVADNFRIAAR  241 (303)
Q Consensus       163 ~rsL~diV~~edfv-dsEyL~Tl~VvVPk~~~~ew~~~YEtL~~~VVPrSs~~i~eD~e~~L~~V~lFkk~~~eF~~~~R  241 (303)
                      +|||++||+|+||| |||||+|++|||||++++||+++||||++|||||||++|++|+||+||+||||||+++||+++||
T Consensus       161 ~rsL~~iV~~ed~v~dSEyL~Tl~VvVPk~~~~ewl~~YEtL~~~VVPrSs~~i~eD~ey~L~~VtlFkk~~~eF~~~~r  240 (371)
T PF03223_consen  161 VRSLSDIVKPEDFVLDSEYLTTLLVVVPKNSVKEWLKSYETLTDMVVPRSSKKIAEDSEYVLFSVTLFKKVVDEFKNKCR  240 (371)
T ss_dssp             TS--TTT--GGGS--S-SSEEEEEEEEEGGGHHHHHHHGGGSSTTB-TT--EEEEE-SSEEEEEEEEEGGGHHHHHHHHH
T ss_pred             cccHHhhCCHHhcccccccceEEEEEechhhHHHHHHHHhccCCccCCChHHhhhcCCCeEEEEEEEEeccHHHHHHHHH
Confidence            99999999999999 99999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HcCCeeeecccCHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhhhHHHHHHHHHHHhhc
Q 022080          242 EKGFQIRDFEYSSEAQESRNQELEKLVHDQESLRSSLLQWCYTSYGEVCSTFLHEIYSI  300 (303)
Q Consensus       242 e~kf~vRdF~y~ee~~~~~~~e~~~l~~e~~~~~~~L~r~~~~~fse~f~awiHlK~l~  300 (303)
                      |+||+||||+|+|+.++++++|+++++++++++|+.|+|||++||||+|+|||||||||
T Consensus       241 e~kf~vRdF~y~ee~~~~~~~e~~~l~~~~~~~~~~L~r~~~~~fse~f~awiHlKalR  299 (371)
T PF03223_consen  241 EKKFIVRDFKYDEEESEEEKEEREKLETEEKKQWGELLRWCKTNFSEAFSAWIHLKALR  299 (371)
T ss_dssp             HTT-EEE-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HcCCeeeecccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh
Confidence            99999999999999999999999999999999999999999999999999999999997

ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. V-ATPases (also known as V1V0-ATPase or vacuolar ATPase) (3.6.3.14 from EC) are found in the eukaryotic endomembrane system, and in the plasma membrane of prokaryotes and certain specialised eukaryotic cells. V-ATPases hydrolyse ATP to drive a proton pump, and are involved in a variety of vital intra- and inter-cellular processes such as receptor mediated endocytosis, protein trafficking, active transport of metabolites, homeostasis and neurotransmitter release []. V-ATPases are composed of two linked complexes: the V1 complex (subunits A-H) contains the catalytic core that hydrolyses ATP, while the V0 complex (subunits a, c, c', c'', d) forms the membrane-spanning pore. V-ATPases may have an additional role in membrane fusion through binding to t-SNARE proteins []. This entry represents the C subunit that is part of the V1 complex, and is localised to the interface between the V1 and V0 complexes []. This subunit does not show any homology with F-ATPase subunits. The C subunit plays an essential role in controlling the assembly of V-ATPase, acting as a flexible stator that holds together the catalytic (V1) and membrane (V0) sectors of the enzyme []. The release of subunit C from the ATPase complex results in the dissociation of the V1 and V0 subcomplexes, which is an important mechanism in controlling V-ATPase activity in cells. More information about this protein can be found at Protein of the Month: ATP Synthases [].; GO: 0016820 hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances, 0015991 ATP hydrolysis coupled proton transport, 0033180 proton-transporting V-type ATPase, V1 domain; PDB: 1U7L_A.

>KOG2909 consensus Vacuolar H+-ATPase V1 sector, subunit C [Energy production and conversion]

Probab=100.00  E-value=9.9e-105  Score=746.73  Aligned_cols=299  Identities=44%  Similarity=0.755  Sum_probs=292.6

Q ss_pred             CCcEEEEeecCCCC-hHHHHHHHHHHhccCCCCCCcccccCCCCCCCChhhhHhhhhhhHhhhhhHHHHHHHHHHHHHHh
Q 022080            2 ASRYWVVSLPVQNS-AASVWNRLQEQISKHSFDTPLYRFNIPNLRVGTLDSLLALSDDLVKSNSFVESVSHKIRRQIEEL   80 (303)
Q Consensus         2 ~~~~wLvs~P~~~~-~~~~~~~L~~~l~~~~~~~~~~~f~iP~fKvGTLDsLv~lsDeL~K~D~~~e~~v~Ki~~~~~~l   80 (303)
                      |++|||||+|++++ +.++|+.+...+++.+..+.+++|.||+||+||||+||++||||+|+|++||++++||.+++.+.
T Consensus         1 Ms~fwliSlP~~~~~~~~~~d~i~~~~sk~s~~~~vs~F~IP~fkvgsLD~Lv~~se~L~Kld~~~e~~i~ki~~~~~~~   80 (381)
T KOG2909|consen    1 MSEFWLISLPGEKTGNQQTWDRINDLTSKRSNLSTVSKFNIPDFKVGSLDVLVGLSEELGKLDTFVEGLIKKIAGYLKEV   80 (381)
T ss_pred             CcceEEEeCCcCCcccccHHHHHHHHHhccccccccccccCCCcccccHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHH
Confidence            56999999999766 78999999999998777889999999999999999999999999999999999999999999888


Q ss_pred             hcc-ccccccceeeCCCChhhhhcccccccccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCC
Q 022080           81 ERV-SGIESSSLSVDGVPVDTYLTRFVWDEAKYPTMSPLREIVDGIHTLVAKIEDDLKVRVAEYNNVRSQLNAINRKQSG  159 (303)
Q Consensus        81 ~~~-~~~~~~~l~v~~~~~~~yl~~F~Wd~aKyp~~~~l~el~~~i~~~v~~id~dlk~k~~~Yn~~K~~l~~l~RK~~G  159 (303)
                      +++ .+++.+++.+||+|+.+|+++|+||++|||.++||++++++|++++++||+|+|+|+++||++|++||+++||++|
T Consensus        81 le~~s~~~~~~l~~n~~~~~ey~t~F~Wd~akf~~~~si~~iid~I~~e~~qie~Dlk~r~a~yn~ak~nl~nlerK~~G  160 (381)
T KOG2909|consen   81 LEDSSGKVGENLMANGVPLPEYLTRFQWDMAKFPTNQSIKEIIDLISKEIAQIENDLKTRAAAYNNAKGNLQNLERKKTG  160 (381)
T ss_pred             HhhcccchhhceeeCCcCHHHHHhHheehhhhccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhhhccC
Confidence            875 7788999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CcccccCcCCCCCCCcc-ccCCceEEEEEecCCChHHHHHHhccccCccccCCcccccccCCeeEEEEEEecccHHHHHH
Q 022080          160 SLAVRDLSNLVKPEDII-TSEHLVTLLAVVPKYSQKDWLASYETLTSYVVPRSSKLLYEDNEYALYTVTLFGRVADNFRI  238 (303)
Q Consensus       160 nL~~rsL~diV~~edfv-dsEyL~Tl~VvVPk~~~~ew~~~YEtL~~~VVPrSs~~i~eD~e~~L~~V~lFkk~~~eF~~  238 (303)
                      ||++|||++||+||||| |||||+|++|||||+.++||+++||||+|||||||+++|.||+||+||+||||||++|+|++
T Consensus       161 sL~~rsL~~IVk~edfvl~SEyL~tllVvVPK~~~~df~~~YEtlsd~VvPrSskki~eD~Ey~Lf~V~lFkk~~edFr~  240 (381)
T KOG2909|consen  161 SLSTRSLADIVKKEDFVLDSEYLTTLLVVVPKALVKDFLKSYETLSDMVVPRSSKKINEDAEYVLFTVTLFKKVAEDFRT  240 (381)
T ss_pred             ChhhhhHHHhCCchhhccchhhheeEEEEeeccchHHHHHHHHhhccccchhhhhhcccccceEEEEEEEeehhHHHHHH
Confidence            99999999999999999 99999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHcCCeeeecccCHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhhhHHHHHHHHHHHhhc
Q 022080          239 AAREKGFQIRDFEYSSEAQESRNQELEKLVHDQESLRSSLLQWCYTSYGEVCSTFLHEIYSI  300 (303)
Q Consensus       239 ~~Re~kf~vRdF~y~ee~~~~~~~e~~~l~~e~~~~~~~L~r~~~~~fse~f~awiHlK~l~  300 (303)
                      +|||+||+||||.|++++++++++|++++++++++|+++|+|||++||||+|++||||||||
T Consensus       241 ~ArE~kF~vRdF~y~ee~~e~~k~E~~ra~~~~k~~~~~Llr~~kv~fsEvF~~wiHiKaLR  302 (381)
T KOG2909|consen  241 KAREKKFIVRDFDYNEEEIETEKAEMDRAATDKKSMRGPLLRWLKVNFSEVFIAWIHIKALR  302 (381)
T ss_pred             HHHHcCCceeeccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999998

>COG5127 Vacuolar H+-ATPase V1 sector, subunit C [Energy production and conversion]

Probab=100.00  E-value=1.1e-74  Score=536.51  Aligned_cols=293  Identities=26%  Similarity=0.380  Sum_probs=269.4

Q ss_pred             CcEEEEeecCC--CChHHHHHHHHHHhccCCCCCCcccccCCCCCCCChhhhHhhhhhhHhhhhhHHHHHHHHHHHHHHh
Q 022080            3 SRYWVVSLPVQ--NSAASVWNRLQEQISKHSFDTPLYRFNIPNLRVGTLDSLLALSDDLVKSNSFVESVSHKIRRQIEEL   80 (303)
Q Consensus         3 ~~~wLvs~P~~--~~~~~~~~~L~~~l~~~~~~~~~~~f~iP~fKvGTLDsLv~lsDeL~K~D~~~e~~v~Ki~~~~~~l   80 (303)
                      +.|||||+|..  ++..+  ++....+-++.  +.+.+|.||.||+|+||.||.+|++|.|+|++|++.+.||.+++..+
T Consensus         4 sdFilvslP~~~~Gs~~d--~d~~~~l~ggr--stvs~f~~P~Fk~~SLd~lI~qsE~L~k~d~qc~~aIsKi~~i~~g~   79 (383)
T COG5127           4 SDFILVSLPVEEDGSRPD--EDQIWDLYGGR--STVSRFLLPSFKGVSLDGLINQSERLGKLDKQCEGAISKILKIFMGY   79 (383)
T ss_pred             cceEEEeccccccCCCCc--HHHHHHHhcCc--cccccccCCCccccchHHHHHHHHHHhhHHHHHHHHHHHHHHHHHhh
Confidence            68999999983  33322  34334333333  56899999999999999999999999999999999999999999999


Q ss_pred             hccccccccc-eeeCCCChhhhhcccccccccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCC
Q 022080           81 ERVSGIESSS-LSVDGVPVDTYLTRFVWDEAKYPTMSPLREIVDGIHTLVAKIEDDLKVRVAEYNNVRSQLNAINRKQSG  159 (303)
Q Consensus        81 ~~~~~~~~~~-l~v~~~~~~~yl~~F~Wd~aKyp~~~~l~el~~~i~~~v~~id~dlk~k~~~Yn~~K~~l~~l~RK~~G  159 (303)
                      +......... -.++|.++ +|+..|+||..+|..+++|.+++..|..|..++++|+|+|.++|+.||.+++++|||++|
T Consensus        80 ~~ss~gd~~~~~iv~~~~p-Ey~~~f~W~~~~F~~nKsI~~~i~li~~E~~~~~~d~r~~~~~f~~Ak~~~~~~qrk~~G  158 (383)
T COG5127          80 CRSSNGDRVGKGIVYGSTP-EYGDFFEWDRQSFVTNKSIEKAILLIDGEYRRISKDYREKAEEFDGAKRECEKLQRKTRG  158 (383)
T ss_pred             hccccccccccccccCCch-hhhhhhhcchhheeccccHHHHHHHhhhHHHHHHHHHHHHHHHhhHHHHHHHHHHhhccC
Confidence            9743323333 33455555 999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CcccccCcCCCCCCCcc-ccCCceEEEEEecCCChHHHHHHhccccCccccCCcccccccCCeeEEEEEEecccHHHHHH
Q 022080          160 SLAVRDLSNLVKPEDII-TSEHLVTLLAVVPKYSQKDWLASYETLTSYVVPRSSKLLYEDNEYALYTVTLFGRVADNFRI  238 (303)
Q Consensus       160 nL~~rsL~diV~~edfv-dsEyL~Tl~VvVPk~~~~ew~~~YEtL~~~VVPrSs~~i~eD~e~~L~~V~lFkk~~~eF~~  238 (303)
                      ||+++||++||++|||| +||||||++|||||+..++|+++||||++.|+|+|+++|++|+||.||+|++|||.+++|++
T Consensus       159 ~Ls~~sL~~IV~~eDvv~gse~Lt~v~vaVpk~l~~~F~~syeTls~~V~p~sa~kv~~D~EyvLf~V~vfkk~~~~f~t  238 (383)
T COG5127         159 SLSDISLGIIVEREDVVEGSEFLTVVYVAVPKALVPEFNRSYETLSPHVSPDSAEKVNSDEEYVLFKVYVFKKGEEDFRT  238 (383)
T ss_pred             ChhhhhHhhhcCchhhccchhhheeeEEEehhhhhHHHHhhhhhcCcccChhHHhhhcCccceEEEEEEEEecChHHHHH
Confidence            99999999999999999 89999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHcCCeeeecccCHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhhhHHHHHHHHHHHhhc
Q 022080          239 AAREKGFQIRDFEYSSEAQESRNQELEKLVHDQESLRSSLLQWCYTSYGEVCSTFLHEIYSI  300 (303)
Q Consensus       239 ~~Re~kf~vRdF~y~ee~~~~~~~e~~~l~~e~~~~~~~L~r~~~~~fse~f~awiHlK~l~  300 (303)
                      +|||.||+||||.|+++..++++.|+++++..++++...|+|+..++|+|+|+.|||||+||
T Consensus       239 ~are~kf~vref~~~~~l~e~~~~e~d~Aa~ke~~m~~~L~r~a~va~~evF~~wiHiK~Lr  300 (383)
T COG5127         239 MAREEKFMVREFDKNMVLSEEMIAERDRAAEKESAMEKILMRFAHVALTEVFRIWIHIKLLR  300 (383)
T ss_pred             HHHhcCcchhhcchhhhhHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999997

>PRK05771 V-type ATP synthase subunit I; Validated

Probab=96.34  E-value=0.31  Score=51.23  Aligned_cols=159  Identities=18%  Similarity=0.304  Sum_probs=101.3

Q ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCcccccCcCC-CCCCCccccCCceEEEEEecCCChHH
Q 022080          117 PLREIVDGIHTLVAKIEDDLKVRVAEYNNVRSQLNAINRKQSGSLAVRDLSNL-VKPEDIITSEHLVTLLAVVPKYSQKD  195 (303)
Q Consensus       117 ~l~el~~~i~~~v~~id~dlk~k~~~Yn~~K~~l~~l~RK~~GnL~~rsL~di-V~~edfvdsEyL~Tl~VvVPk~~~~e  195 (303)
                      +..++.+....++.+++++++...+..++++++++.++....   ..+.+.++ +..+++-+++|+...+-.||+...+.
T Consensus        83 ~~~e~~~~~~~~~~~~~~~i~~l~~~~~~L~~~~~~l~~~~~---~l~~~~~ld~~l~~~~~~~~~~~~~G~i~~~~~~~  159 (646)
T PRK05771         83 SLEELIKDVEEELEKIEKEIKELEEEISELENEIKELEQEIE---RLEPWGNFDLDLSLLLGFKYVSVFVGTVPEDKLEE  159 (646)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HhhhhhcCCCCHHHhCCCCcEEEEEEEecchhhhh
Confidence            455555566666666777776666666666666666554322   12233332 11222336788888899999877664


Q ss_pred             HHHHhccccCccccCCcccccccCCeeEEEEEEecccHHHHHHHHHHcCCeeeeccc---CHHHHHHHHHHHHHHHHHHH
Q 022080          196 WLASYETLTSYVVPRSSKLLYEDNEYALYTVTLFGRVADNFRIAAREKGFQIRDFEY---SSEAQESRNQELEKLVHDQE  272 (303)
Q Consensus       196 w~~~YEtL~~~VVPrSs~~i~eD~e~~L~~V~lFkk~~~eF~~~~Re~kf~vRdF~y---~ee~~~~~~~e~~~l~~e~~  272 (303)
                        ..++....++     ..+.++.++.-+-|+.-+...++....|+..+|..-++-.   -++.+++.++++++++++.+
T Consensus       160 --~~~~~~~~~~-----~~~~~~~~~~~~vvv~~~~~~~~~~~~l~~~~f~~~~~p~~~~p~~~l~~l~~~l~~l~~~~~  232 (646)
T PRK05771        160 --LKLESDVENV-----EYISTDKGYVYVVVVVLKELSDEVEEELKKLGFERLELEEEGTPSELIREIKEELEEIEKERE  232 (646)
T ss_pred             --HHhhccCceE-----EEEEecCCcEEEEEEEEhhhHHHHHHHHHHCCCEEecCCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence              1222211122     3456777777666666678889999999998876544421   35667778888888888888


Q ss_pred             HHHhHHHHHHHhh
Q 022080          273 SLRSSLLQWCYTS  285 (303)
Q Consensus       273 ~~~~~L~r~~~~~  285 (303)
                      +....+.+++...
T Consensus       233 ~~~~~l~~~~~~~  245 (646)
T PRK05771        233 SLLEELKELAKKY  245 (646)
T ss_pred             HHHHHHHHHHHHH
Confidence            8888888866543

>PF01496 V_ATPase_I: V-type ATPase 116kDa subunit family ; InterPro: IPR002490 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane

Probab=90.95  E-value=1.1  Score=47.94  Aligned_cols=120  Identities=19%  Similarity=0.186  Sum_probs=65.3

Q ss_pred             ccCCceE--EEEEecCCChHHHHHHhccccCc-cccCCc--ccccccCC----eeEEEEE-EecccHHHHHHHHHHcCCe
Q 022080          177 TSEHLVT--LLAVVPKYSQKDWLASYETLTSY-VVPRSS--KLLYEDNE----YALYTVT-LFGRVADNFRIAAREKGFQ  246 (303)
Q Consensus       177 dsEyL~T--l~VvVPk~~~~ew~~~YEtL~~~-VVPrSs--~~i~eD~e----~~L~~V~-lFkk~~~eF~~~~Re~kf~  246 (303)
                      +++++..  ++=+||+.....|.+..++.+.- +.-+.+  ..+..|..    -..|-|. .=++..++...-|+..+|.
T Consensus       137 ~~~~~~~~f~~G~I~~~~~~~f~~~l~r~~~~N~fi~~~~Ie~~~~d~~e~~~k~v~vv~~~~~~~~~kv~~il~~~~f~  216 (759)
T PF01496_consen  137 SSKFLNLGFIAGVIPREKIESFERILWRATRGNIFIRFSEIEEILEDPKEEVEKEVFVVFFSGKELEEKVKKILRSFGFE  216 (759)
T ss_dssp             ---------------HHHHHHHHHHHHHHHTT-----S------EEEE-EE-SSSEEEEEEEEGGGHHHHHHHHHTTT--
T ss_pred             cccceeeeEEEEEEehhhHHHHHHHHHHhccCCeEEEEEeeecccccccceeeeeeEEEEEEchhhHHHHHHHhhccCce
Confidence            4455544  67789999999999988876654 222221  22233332    2334333 3467889999999999998


Q ss_pred             eeecccCH----HHHHHHHHHHHHHHHHHHHHHhHHHHHHHhhhHHHHHHHHHH
Q 022080          247 IRDFEYSS----EAQESRNQELEKLVHDQESLRSSLLQWCYTSYGEVCSTFLHE  296 (303)
Q Consensus       247 vRdF~y~e----e~~~~~~~e~~~l~~e~~~~~~~L~r~~~~~fse~f~awiHl  296 (303)
                      .=++..++    +.+++.++++++++++.++....+.+++.....++...+..+
T Consensus       217 ~~~~p~~~~~p~e~~~~l~~~i~~l~~~~~~~~~~l~~~~~~~~~~l~~~~~~l  270 (759)
T PF01496_consen  217 RYDLPEDEGTPEEAIKELEEEIEELEKELEELEEELKKLLEKYAEELEAWYEYL  270 (759)
T ss_dssp             B----GGGGG-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ecCCCCccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            76654333    556678888888888888888888887776655555444444

ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. The V-ATPases (or V1V0-ATPase) and A-ATPases (or A1A0-ATPase) are each composed of two linked complexes: the V1 or A1 complex contains the catalytic core that hydrolyses/synthesizes ATP, and the V0 or A0 complex that forms the membrane-spanning pore. The V- and A-ATPases both contain rotary motors, one that drives proton translocation across the membrane and one that drives ATP synthesis/hydrolysis [, , ]. The V- and A-ATPases more closely resemble one another in subunit structure than they do the F-ATPases, although the function of A-ATPases is closer to that of F-ATPases. This entry represents the 116kDa subunit (or subunit a) and subunit I found in the V0 or A0 complex of V- or A-ATPases, respectively. The 116kDa subunit is a transmembrane glycoprotein required for the assembly and proton transport activity of the ATPase complex. Several isoforms of the 116kDa subunit exist, providing a potential role in the differential targeting and regulation of the V-ATPase for specific organelles []. More information about this protein can be found at Protein of the Month: ATP Synthases [].; GO: 0015078 hydrogen ion transmembrane transporter activity, 0015991 ATP hydrolysis coupled proton transport, 0033177 proton-transporting two-sector ATPase complex, proton-transporting domain; PDB: 2RPW_X 2NVJ_A 2JTW_A 3RRK_A.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	303
1u7l_A	392	Crystal Structure Of Subunit C (Vma5p) Of The Yeast		1e-35
4dl0_I	130	Crystal Structure Of The Heterotrimeric Egchead Per		3e-22

>pdb|1U7L|A Chain A, Crystal Structure Of Subunit C (Vma5p) Of The Yeast V-Atpase Length = 392

Iteration: 1
 Score =  146 bits (368), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 84/258 (32%), Positives = 139/258 (53%), Gaps = 1/258 (0%)
Query: 39  FNIPNLRVGTXXXXXXXXXXXVKSNSFVESVSHKIRRQIEELERVSGIESSSLSVDGVPV 98
           F IP  ++G+            K ++ + +   KI   ++ L   S     +L ++ +PV
Sbjct: 48  FKIPEFKIGSLDTLIVESEELSKVDNQIGASIGKIIEILQGLNETSTNAYRTLPINNMPV 107
Query: 99  DTYLTRFVWDEAKYPTMSPLREIVDGIHTLVAKIEDDLKVRVAEYNNVRSQLNAINRKQS 158
             YL  F W   K+     +++++  I    ++++ D++   A YN+ ++ L A  RK++
Sbjct: 108 PEYLENFQWQTRKFKLDKSIKDLITLISNESSQLDADVRATYANYNSAKTNLAAAERKKT 167
Query: 159 GSLAVRDLSNLVKPED-IITSEHLVTLLAVVPKYSQKDWLASYETLTSYVVPRSSKLLYE 217
           G L+VR L ++VKPED ++ SEHL T+L  VPK  + D+  SYETL+  VVP S+ ++ E
Sbjct: 168 GDLSVRSLHDIVKPEDFVLNSEHLTTVLVAVPKSLKSDFEKSYETLSKNVVPASASVIAE 227
Query: 218 DNEYALYTVTLFGRVADNFRIAAREKGFQIRDFEYSSEAQESRNQELEKLVHDQESLRSS 277
           D EY L+ V LF +    F  AAREK F  R+F YS E  +   +E +     ++SLR  
Sbjct: 228 DAEYVLFNVHLFKKNVQEFTTAAREKKFIPREFNYSEELIDQLKKEHDSAASLEQSLRVQ 287
Query: 278 LLQWCYTSYGEVCSTFLH 295
           L++   T+Y +V   + H
Sbjct: 288 LVRLAKTAYVDVFINWFH 305

>pdb|4DL0|I Chain I, Crystal Structure Of The Heterotrimeric Egchead Peripheral Stalk Complex Of The Yeast Vacuolar Atpase Length = 130

Iteration: 1
 Score =  102 bits (254), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 53/107 (49%), Positives = 70/107 (65%), Gaps = 1/107 (0%)
Query: 150 LNAINRKQSGSLAVRDLSNLVKPED-IITSEHLVTLLAVVPKYSQKDWLASYETLTSYVV 208
           L A  RK++G L+VR L ++VKPED ++ SEHL T+L  VPK  + D+  SYETL+  VV
Sbjct: 12  LAAAERKKTGDLSVRSLHDIVKPEDFVLNSEHLTTVLVAVPKSLKSDFEKSYETLSKNVV 71
Query: 209 PRSSKLLYEDNEYALYTVTLFGRVADNFRIAAREKGFQIRDFEYSSE 255
           P S+ ++ ED EY L+ V LF +    F  AAREK F  R+F YS E
Sbjct: 72  PASASVIAEDAEYVLFNVHLFKKNVQEFTTAAREKKFIPREFNYSEE 118

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	303
1u7l_A	392	Vacuolar ATP synthase subunit C; hydrolase, struct	1e-116
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	6e-05

>1u7l_A Vacuolar ATP synthase subunit C; hydrolase, structural protein; HET: TLA; 1.75A {Saccharomyces cerevisiae} SCOP: e.57.1.1 Length = 392

 Score =  339 bits (871), Expect = e-116
 Identities = 93/299 (31%), Positives = 160/299 (53%), Gaps = 4/299 (1%)

Query: 1   MASRYWVVSLPVQNSAASVWNRLQEQISKHSFD---TPLYRFNIPNLRVGTLDSLLALSD 57
            A+ + ++SLP      +      +     +       +  F IP  ++G+LD+L+  S+
Sbjct: 7   TANDFILISLPQNAQPVTAPGSKTDSWFNETLIGGRAFVSDFKIPEFKIGSLDTLIVESE 66

Query: 58  DLVKSNSFVESVSHKIRRQIEELERVSGIESSSLSVDGVPVDTYLTRFVWDEAKYPTMSP 117
           +L K ++ + +   KI   ++ L   S     +L ++ +PV  YL  F W   K+     
Sbjct: 67  ELSKVDNQIGASIGKIIEILQGLNETSTNAYRTLPINNMPVPEYLENFQWQTRKFKLDKS 126

Query: 118 LREIVDGIHTLVAKIEDDLKVRVAEYNNVRSQLNAINRKQSGSLAVRDLSNLVKPED-II 176
           +++++  I    ++++ D++   A YN+ ++ L A  RK++G L+VR L ++VKPED ++
Sbjct: 127 IKDLITLISNESSQLDADVRATYANYNSAKTNLAAAERKKTGDLSVRSLHDIVKPEDFVL 186

Query: 177 TSEHLVTLLAVVPKYSQKDWLASYETLTSYVVPRSSKLLYEDNEYALYTVTLFGRVADNF 236
            SEHL T+L  VPK  + D+  SYETL+  VVP S+ ++ ED EY L+ V LF +    F
Sbjct: 187 NSEHLTTVLVAVPKSLKSDFEKSYETLSKNVVPASASVIAEDAEYVLFNVHLFKKNVQEF 246

Query: 237 RIAAREKGFQIRDFEYSSEAQESRNQELEKLVHDQESLRSSLLQWCYTSYGEVCSTFLH 295
             AAREK F  R+F YS E  +   +E +     ++SLR  L++   T+Y +V   + H
Sbjct: 247 TTAAREKKFIPREFNYSEELIDQLKKEHDSAASLEQSLRVQLVRLAKTAYVDVFINWFH 305

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 43.7 bits (102), Expect = 6e-05
 Identities = 44/286 (15%), Positives = 80/286 (27%), Gaps = 66/286 (23%)

Query: 19  VWNRLQEQISKHSFDTPLYRFNIPNLRVGTLDSLLALSDDLVKSNSFVESVSHKIRRQIE 78
           + + ++ +  + S  T +Y        +   D L   +    K N        K+R+ + 
Sbjct: 94  LMSPIKTEQRQPSMMTRMY--------IEQRDRLYNDNQVFAKYNVSRLQPYLKLRQALL 145

Query: 79  ELERVSGIESSSLSVDGVPVDTYLTRFVWDEAKYPTMSPLREIVDGI--HTLVAKIEDDL 136
           EL     +      +DGV                           G     +   +    
Sbjct: 146 ELRPAKNV-----LIDGVL--------------------------GSGKTWVALDVCLSY 174

Query: 137 KVRVAEYNNVRSQLNAINRKQSGSL--AVRDLSNLVKPEDIITSEHLVTLLAVVPKYSQK 194
           KV+      +   LN  N     ++   ++ L   + P     S+H   +   +  +S +
Sbjct: 175 KVQCKMDFKI-FWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNI--KLRIHSIQ 231

Query: 195 DWLASYETLTSYVVPRSSKLLYEDNEYALYTVTLFGRVADNFR----IAAREKGFQIRDF 250
             L        Y       LL   N         F     N      +  R K  Q+ DF
Sbjct: 232 AELRRLLKSKPY--ENC--LLVLLNVQNAKAWNAF-----NLSCKILLTTRFK--QVTDF 280

Query: 251 EYSSEAQESRNQELEKLVHDQESLRSSLLQWCYTSYG----EVCST 292
             ++             +   E   S LL++          EV +T
Sbjct: 281 LSAATTTHISLDHHSMTLTPDEVK-SLLLKYLDCRPQDLPREVLTT 325

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	303
1u7l_A	392	Vacuolar ATP synthase subunit C; hydrolase, struct	100.0
3rrk_A	357	V-type ATPase 116 kDa subunit; alpha beta fold, pr	96.0

>1u7l_A Vacuolar ATP synthase subunit C; hydrolase, structural protein; HET: TLA; 1.75A {Saccharomyces cerevisiae} SCOP: e.57.1.1

Probab=100.00  E-value=1.6e-106  Score=784.16  Aligned_cols=296  Identities=31%  Similarity=0.539  Sum_probs=284.1

Q ss_pred             CCcEEEEeecCCCC----hHHHHHH-HHHHhccCCCCCCcccccCCCCCCCChhhhHhhhhhhHhhhhhHHHHHHHHHHH
Q 022080            2 ASRYWVVSLPVQNS----AASVWNR-LQEQISKHSFDTPLYRFNIPNLRVGTLDSLLALSDDLVKSNSFVESVSHKIRRQ   76 (303)
Q Consensus         2 ~~~~wLvs~P~~~~----~~~~~~~-L~~~l~~~~~~~~~~~f~iP~fKvGTLDsLv~lsDeL~K~D~~~e~~v~Ki~~~   76 (303)
                      +++|||||+|.+++    ++++|+. |+..+++.  .+.+++|+||+||+||||+||+|||||+|+|++||++++||+++
T Consensus         8 ~~~y~LvSlP~~~~~~~~~~~~~~~~l~~~~~~~--~~~~~~f~IP~lkvGTLDsLv~lsDdL~Kld~~ve~v~~Ki~~~   85 (392)
T 1u7l_A            8 ANDFILISLPQNAQPVTAPGSKTDSWFNETLIGG--RAFVSDFKIPEFKIGSLDTLIVESEELSKVDNQIGASIGKIIEI   85 (392)
T ss_dssp             CCEEEEEEEETTCCCTTSTTCCHHHHHHHTGGGG--TSEEEECCCCCCBCSCGGGHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCceEEEEccCCCCCCccHHHHHHHHHHhhccCC--CCccccccCCCCCccCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            46899999998643    4488987 88887754  47789999999999999999999999999999999999999999


Q ss_pred             HHHhhcc-ccccccceeeCCCChhhhhcccccccccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 022080           77 IEELERV-SGIESSSLSVDGVPVDTYLTRFVWDEAKYPTMSPLREIVDGIHTLVAKIEDDLKVRVAEYNNVRSQLNAINR  155 (303)
Q Consensus        77 ~~~l~~~-~~~~~~~l~v~~~~~~~yl~~F~Wd~aKyp~~~~l~el~~~i~~~v~~id~dlk~k~~~Yn~~K~~l~~l~R  155 (303)
                      +++++++ .+++.+++ +||+|+++||++|+||++|||.++||+||+++|++++++||+|+|+|+++||++|++|++++|
T Consensus        86 ~~~~~~~~~~~~~~~l-vn~~~~~~yl~~F~Wd~aKyp~~~~L~elv~~i~~~v~~id~dlk~k~~~Yn~~K~~l~~~~R  164 (392)
T 1u7l_A           86 LQGLNETSTNAYRTLP-INNMPVPEYLENFQWQTRKFKLDKSIKDLITLISNESSQLDADVRATYANYNSAKTNLAAAER  164 (392)
T ss_dssp             HHHTTSSCSSSCCSCC-BTTBCHHHHHHTCCCCTTTSCTTSBHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHhhcchhhHHHHh-cCCCCHHHHHhhceeccccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence            9999875 45667888 999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hcCCCcccccCcCCCCCCCcc-ccCCceEEEEEecCCChHHHHHHhccccCccccCCcccccccCCeeEEEEEEecccHH
Q 022080          156 KQSGSLAVRDLSNLVKPEDII-TSEHLVTLLAVVPKYSQKDWLASYETLTSYVVPRSSKLLYEDNEYALYTVTLFGRVAD  234 (303)
Q Consensus       156 K~~GnL~~rsL~diV~~edfv-dsEyL~Tl~VvVPk~~~~ew~~~YEtL~~~VVPrSs~~i~eD~e~~L~~V~lFkk~~~  234 (303)
                      |++|||++|||++||+||||| |||||+|++|||||++++||+++||||++|||||||++|++|+||+||+||+|||+++
T Consensus       165 K~~GnL~~rsL~~iV~~edfv~dSEyL~TllVvVPk~~~~dwl~~YEtL~~~VVPrSs~~i~~D~ey~L~~VtlFkk~~~  244 (392)
T 1u7l_A          165 KKTGDLSVRSLHDIVKPEDFVLNSEHLTTVLVAVPKSLKSDFEKSYETLSKNVVPASASVIAEDAEYVLFNVHLFKKNVQ  244 (392)
T ss_dssp             HTCSCTTTSCCTTTCCGGGSCCSCSSEEEEEEEEEGGGHHHHHHHGGGSSTTBCTTCCEEEEECSSEEEEEEEEEGGGHH
T ss_pred             ccCCceeeeeHHHhcCHHHccCccccceEEEEEEeCccHHHHHHHHhhcCCCccCChhhhhhcCCCceEEEEEEEhhhHH
Confidence            999999999999999999999 9999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHcCCeeeecccCHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhhhHHHHHHHHHHHhhc
Q 022080          235 NFRIAAREKGFQIRDFEYSSEAQESRNQELEKLVHDQESLRSSLLQWCYTSYGEVCSTFLHEIYSI  300 (303)
Q Consensus       235 eF~~~~Re~kf~vRdF~y~ee~~~~~~~e~~~l~~e~~~~~~~L~r~~~~~fse~f~awiHlK~l~  300 (303)
                      +|+++|||+||+||||+|+|+.++++++|++++++++++++++|+|||++||||+|+|||||||||
T Consensus       245 eF~~~~Re~kf~vRdF~y~ee~~~~~~~e~~~l~~~~~~~~~~L~r~~~~~fse~f~awiHiKalR  310 (392)
T 1u7l_A          245 EFTTAAREKKFIPREFNYSEELIDQLKKEHDSAASLEQSLRVQLVRLAKTAYVDVFINWFHIKALR  310 (392)
T ss_dssp             HHHHHHHHTTCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHcCCccccCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHH
Confidence            999999999999999999999999999999999999999999999999999999999999999998

>3rrk_A V-type ATPase 116 kDa subunit; alpha beta fold, proton pump, subunit I/A, V-ATPase, proton; HET: NHE; 2.64A {Meiothermus ruber}

Probab=96.00  E-value=0.64  Score=43.37  Aligned_cols=158  Identities=8%  Similarity=-0.004  Sum_probs=104.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHhhhhcCC-CcccccCcCCCCCCCccccCCceEEEEEe-cCCChH
Q 022080          120 EIVDGIHTLVAKIEDDLKVRVAEYNNVRSQ---LNAINRKQSG-SLAVRDLSNLVKPEDIITSEHLVTLLAVV-PKYSQK  194 (303)
Q Consensus       120 el~~~i~~~v~~id~dlk~k~~~Yn~~K~~---l~~l~RK~~G-nL~~rsL~diV~~edfvdsEyL~Tl~VvV-Pk~~~~  194 (303)
                      +.++.+..++..+++.+...-+....++..   +..+.-=  + +|-              -+-++--+...| |+....
T Consensus        99 ~~~~~l~~~~~~l~~~~~~L~~~~~~l~~~~~~l~~L~p~--~~~ld--------------~~~~~g~~~g~ip~~~~~~  162 (357)
T 3rrk_A           99 AVLRPVASRAEVLGKERAALEEEIQTIELFGKAAEKLAAL--AHGLD--------------ESPRLGVIPFLVAKPEELE  162 (357)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--TTTTT--------------TCTTEEEEEEEESCHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhhh--hccCC--------------ccceeeeeeEEecChhhHH
Confidence            335556666666666666666666666665   5554322  2 332              244565566689 688888


Q ss_pred             HHHHHhccccC-ccccCCcccccccCCeeEEEEEEecccHHHHHHHHHHcCCeeeecc------cCHHHHHHHHHHHHHH
Q 022080          195 DWLASYETLTS-YVVPRSSKLLYEDNEYALYTVTLFGRVADNFRIAAREKGFQIRDFE------YSSEAQESRNQELEKL  267 (303)
Q Consensus       195 ew~~~YEtL~~-~VVPrSs~~i~eD~e~~L~~V~lFkk~~~eF~~~~Re~kf~vRdF~------y~ee~~~~~~~e~~~l  267 (303)
                      .|.+..+..++ +++    ..+.+|.+++.+-|+.-+...++....|+..||..=++-      --.+.+++.+++++.+
T Consensus       163 ~~~~~l~~~~~~~~~----~~~~~~~~~~~~vv~~~~~~~~~v~~il~s~~f~~~~~p~~~~~~~p~~~l~~l~~~i~~l  238 (357)
T 3rrk_A          163 AVRKALQEALADRFV----LEAEPLENQLAALVVVKRSELEAARSSLSRLGLAELRFPGAYGAMPLGKAAARMKERARLA  238 (357)
T ss_dssp             HHHHHHHHHHTTSCE----EEEEECSSSEEEEEEEEGGGHHHHHHHHHTTTCCBCCCCGGGGGSCHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHhcCCeEE----EEeecCCCcEEEEEEEEHHHHHHHHHHHHHCCCeeccCCcccCCCCHHHHHHHHHHHHHHH
Confidence            99887776433 222    234667777666666668889999999999998766554      1124566788999999


Q ss_pred             HHHHHHHHhHHHHHHHhhhHHHHHHHHHHH
Q 022080          268 VHDQESLRSSLLQWCYTSYGEVCSTFLHEI  297 (303)
Q Consensus       268 ~~e~~~~~~~L~r~~~~~fse~f~awiHlK  297 (303)
                      +++..+....|.+++.....++-..+-.+.
T Consensus       239 ~~~l~~~~~~l~~~~~~~~~~l~~~~~~l~  268 (357)
T 3rrk_A          239 PEELVGIREEVARLSRESGEALIALWTRAK  268 (357)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            999999999988888776666555555443

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	303
d1u7la_	388	e.57.1.1 (A:) Vacuolar ATP synthase subunit C {Bak	1e-126

>d1u7la_ e.57.1.1 (A:) Vacuolar ATP synthase subunit C {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 388

class: Multi-domain proteins (alpha and beta)
fold: Vacuolar ATP synthase subunit C
superfamily: Vacuolar ATP synthase subunit C
family: Vacuolar ATP synthase subunit C
domain: Vacuolar ATP synthase subunit C
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score =  364 bits (935), Expect = e-126
 Identities = 93/298 (31%), Positives = 160/298 (53%), Gaps = 4/298 (1%)

Query: 2   ASRYWVVSLPVQNSAASVWNRLQEQISKHSFD---TPLYRFNIPNLRVGTLDSLLALSDD 58
           A+ + ++SLP      +      +     +       +  F IP  ++G+LD+L+  S++
Sbjct: 4   ANDFILISLPQNAQPVTAPGSKTDSWFNETLIGGRAFVSDFKIPEFKIGSLDTLIVESEE 63

Query: 59  LVKSNSFVESVSHKIRRQIEELERVSGIESSSLSVDGVPVDTYLTRFVWDEAKYPTMSPL 118
           L K ++ + +   KI   ++ L   S     +L ++ +PV  YL  F W   K+     +
Sbjct: 64  LSKVDNQIGASIGKIIEILQGLNETSTNAYRTLPINNMPVPEYLENFQWQTRKFKLDKSI 123

Query: 119 REIVDGIHTLVAKIEDDLKVRVAEYNNVRSQLNAINRKQSGSLAVRDLSNLVKPED-IIT 177
           ++++  I    ++++ D++   A YN+ ++ L A  RK++G L+VR L ++VKPED ++ 
Sbjct: 124 KDLITLISNESSQLDADVRATYANYNSAKTNLAAAERKKTGDLSVRSLHDIVKPEDFVLN 183

Query: 178 SEHLVTLLAVVPKYSQKDWLASYETLTSYVVPRSSKLLYEDNEYALYTVTLFGRVADNFR 237
           SEHL T+L  VPK  + D+  SYETL+  VVP S+ ++ ED EY L+ V LF +    F 
Sbjct: 184 SEHLTTVLVAVPKSLKSDFEKSYETLSKNVVPASASVIAEDAEYVLFNVHLFKKNVQEFT 243

Query: 238 IAAREKGFQIRDFEYSSEAQESRNQELEKLVHDQESLRSSLLQWCYTSYGEVCSTFLH 295
            AAREK F  R+F YS E  +   +E +     ++SLR  L++   T+Y +V   + H
Sbjct: 244 TAAREKKFIPREFNYSEELIDQLKKEHDSAASLEQSLRVQLVRLAKTAYVDVFINWFH 301

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	303
d1u7la_	388	Vacuolar ATP synthase subunit C {Baker's yeast (Sa	100.0

>d1u7la_ e.57.1.1 (A:) Vacuolar ATP synthase subunit C {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Multi-domain proteins (alpha and beta)
fold: Vacuolar ATP synthase subunit C
superfamily: Vacuolar ATP synthase subunit C
family: Vacuolar ATP synthase subunit C
domain: Vacuolar ATP synthase subunit C
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=5.1e-105  Score=768.07  Aligned_cols=297  Identities=32%  Similarity=0.540  Sum_probs=283.7

Q ss_pred             CCcEEEEeecCCCCh-----HHHHHHHHHHhccCCCCCCcccccCCCCCCCChhhhHhhhhhhHhhhhhHHHHHHHHHHH
Q 022080            2 ASRYWVVSLPVQNSA-----ASVWNRLQEQISKHSFDTPLYRFNIPNLRVGTLDSLLALSDDLVKSNSFVESVSHKIRRQ   76 (303)
Q Consensus         2 ~~~~wLvs~P~~~~~-----~~~~~~L~~~l~~~~~~~~~~~f~iP~fKvGTLDsLv~lsDeL~K~D~~~e~~v~Ki~~~   76 (303)
                      .++|||||+|++.++     +.+..++...+.+++  +.+++|+||+||+||||+||+|||||+|+|++||++++||+++
T Consensus         4 ~~~y~lvSlP~~~~~~~~~~~~~~~~l~~~~~~~~--~~~~~f~IP~lKvGTLDsLv~lsDeL~KlD~~ve~vv~Kv~~~   81 (388)
T d1u7la_           4 ANDFILISLPQNAQPVTAPGSKTDSWFNETLIGGR--AFVSDFKIPEFKIGSLDTLIVESEELSKVDNQIGASIGKIIEI   81 (388)
T ss_dssp             CCEEEEEEEETTCCCTTSTTCCHHHHHHHTGGGGT--SEEEECCCCCCBCSCGGGHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ccceEEEECCCCCCCCCCchhhHHHHHHhcccCCC--ceeeecCCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            578999999986432     235566777766555  5689999999999999999999999999999999999999999


Q ss_pred             HHHhhccccccccceeeCCCChhhhhcccccccccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh
Q 022080           77 IEELERVSGIESSSLSVDGVPVDTYLTRFVWDEAKYPTMSPLREIVDGIHTLVAKIEDDLKVRVAEYNNVRSQLNAINRK  156 (303)
Q Consensus        77 ~~~l~~~~~~~~~~l~v~~~~~~~yl~~F~Wd~aKyp~~~~l~el~~~i~~~v~~id~dlk~k~~~Yn~~K~~l~~l~RK  156 (303)
                      +.++.++.+...+++.+||+++++||++|+||++|||.++||+||+++|++++++||+|+|+|+++||++|++|++++||
T Consensus        82 ~~~l~~~~~~~~~~l~v~~~~~~~yl~~F~Wd~aKyp~~~~l~elv~~i~~~~~~id~dlk~k~~~Yn~~K~~l~~~~RK  161 (388)
T d1u7la_          82 LQGLNETSTNAYRTLPINNMPVPEYLENFQWQTRKFKLDKSIKDLITLISNESSQLDADVRATYANYNSAKTNLAAAERK  161 (388)
T ss_dssp             HHHTTSSCSSSCCSCCBTTBCHHHHHHTCCCCTTTSCTTSBHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHhccchhhhheEeECCccHHHHhhheecccccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence            99998877777889999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cCCCcccccCcCCCCCCCcc-ccCCceEEEEEecCCChHHHHHHhccccCccccCCcccccccCCeeEEEEEEecccHHH
Q 022080          157 QSGSLAVRDLSNLVKPEDII-TSEHLVTLLAVVPKYSQKDWLASYETLTSYVVPRSSKLLYEDNEYALYTVTLFGRVADN  235 (303)
Q Consensus       157 ~~GnL~~rsL~diV~~edfv-dsEyL~Tl~VvVPk~~~~ew~~~YEtL~~~VVPrSs~~i~eD~e~~L~~V~lFkk~~~e  235 (303)
                      ++|||++|||+|||+|+||| |||||+|++|||||++++||+++||||++|||||||++|++|+||+||+||+|||++++
T Consensus       162 ~~G~L~~r~L~diV~~ed~V~dSEyLtTllVvVPk~~~~dwl~~YEtL~~~VVPrSs~~i~~D~e~~L~~VtlFkk~~~e  241 (388)
T d1u7la_         162 KTGDLSVRSLHDIVKPEDFVLNSEHLTTVLVAVPKSLKSDFEKSYETLSKNVVPASASVIAEDAEYVLFNVHLFKKNVQE  241 (388)
T ss_dssp             TCSCTTTSCCTTTCCGGGSCCSCSSEEEEEEEEEGGGHHHHHHHGGGSSTTBCTTCCEEEEECSSEEEEEEEEEGGGHHH
T ss_pred             cCCceeeccHHhhCCHHHhccccccceEEEEEeecccHHHHHHHHhhhcCcccCChhhhceecCCeeEEEEEEEhhhHHH
Confidence            99999999999999999999 99999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHcCCeeeecccCHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhhhHHHHHHHHHHHhhc
Q 022080          236 FRIAAREKGFQIRDFEYSSEAQESRNQELEKLVHDQESLRSSLLQWCYTSYGEVCSTFLHEIYSI  300 (303)
Q Consensus       236 F~~~~Re~kf~vRdF~y~ee~~~~~~~e~~~l~~e~~~~~~~L~r~~~~~fse~f~awiHlK~l~  300 (303)
                      |+++|||+||+||||.|+|+.++++++|++++++++++++++|+|||++||||+|++||||||||
T Consensus       242 F~~~aRE~kf~vRdF~y~ee~~~~~~~e~~~l~~~~~~~~~~L~r~~~~~fse~f~~wiHiKalR  306 (388)
T d1u7la_         242 FTTAAREKKFIPREFNYSEELIDQLKKEHDSAASLEQSLRVQLVRLAKTAYVDVFINWFHIKALR  306 (388)
T ss_dssp             HHHHHHHTTCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHcCcccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHH
Confidence            99999999999999999999999999999999999999999999999999999999999999998