Citrus Sinensis ID: 022268

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300
MKTPAAFISQKPPSPLFLKFTSNCNSRLLCANRSQTIQCGQIKSFENQPQKWSIDFKSGSEPIHLIQNSTSTAATSASESASRTMKKVCLFYCPETHSLAERVAAQSDAIELRSINWRKFKDGFPNLFIPNAHGIRGQHVAFLASFSSPGKIFEQLSVIYALPKLFVSSFTLVLPFFPTGTSERMEDEGDVATAFTLARILSNIPTSRGGPTSLVTFDIHALQERFYFGDTILPCFESAIPLLLNRLQQLPDSDNISIAFPDDGAWKRFHKQLQHFPMVLRMPYVDLYCVHHAPAYKNSC
cccccccccccccccccccccccccccccccccccccccccccccccccccEEEcccccccccccccccccccccccccccccccccEEEEEccccHHHHHHHHHHHccccccccEEEEccccccEEEEcccccccccEEEEEEcccccHHHHHHHHHHHHcccccccEEEEEEccccccccccccccccccHHHHHHHHHHccccccccccEEEEEEcccccccccccccccccccccHHHHHHHHHcccccccEEEEcccccHHHHHHHHHccccEEEEEcccccccccccccccccc
cccccEEEccccccccccccccccEEEEEccccccEEEEccEccccccccccccccccccccEEcccccccHHHHHHccccccccccEEEEEccccHHHHHHHHHHHccEEcccEEEEEccccccEEEEEEEEccccccEEEEEccccHHHHHHHHHHHHHHHHHHHccEEEEEEcccccHHHHHHccccHHHHHHHHHHHHccccccccccEEEEEEccHHHHHcccccccccccccHHHHHHHHHHHccccccEEEEcccccHHHHHHHHHHccccEEEcccccHHHHEEcccccccc
mktpaafisqkppsplflkfTSNCNSrllcanrsqtiqcgqiksfenqpqkwsidfksgsepihliqnststaatsasesASRTMKKVCLFYCPETHSLAERVAAQSDAIELRSINwrkfkdgfpnlfipnahgirgqHVAFLasfsspgkIFEQLSVIYALPKLFVSSFtlvlpffptgtsermedegdvATAFTLARILsniptsrggptslvtFDIHALQErfyfgdtilpcfESAIPLLLNRlqqlpdsdnisiafpddgawKRFHKQLqhfpmvlrmpyvdlycvhhapayknsc
mktpaafisqkppsplFLKFTSNCNSRLLCANRSQTIQCGQIKSFENQPQKWSIDFKSGSEPIHLIQNSTSTAATSASESASRTMKKVCLFYCPETHSLAERVAAQSDAIELRSINWRKFKDGFPNLFIPNAHGIRGQHVAFLASFSSPGKIFEQLSVIYALPKLFVSSFTLVLPFFPTGTSERMEDEGDVATAFTLARILsniptsrggptSLVTFDIHALQERFYFGDTILPCFESAIPLLLNRLQQLPDSDNISIAFPDDGAWKRFHKQLQHFPMVLRMPYVDLYCVHHAPAYKNSC
MKTPAAFISQKPPSPLFLKFTSNCNSRLLCANRSQTIQCGQIKSFENQPQKWSIDFKSGSEPIHLIQNststaatsasesasrtMKKVCLFYCPETHSLAERVAAQSDAIELRSINWRKFKDGFPNLFIPNAHGIRGQHVAFLASFSSPGKIFEQLSVIYALPKLFVSSFTLVLPFFPTGTSERMEDEGDVATAFTLARILSNIPTSRGGPTSLVTFDIHALQERFYFGDTILPCFESAIPLLLNRLQQLPDSDNISIAFPDDGAWKRFHKQLQHFPMVLRMPYVDLYCVHHAPAYKNSC
***************LFLKFTSNCNSRLLCANRSQTIQCGQIKSFE*****WSI*******************************KKVCLFYCPETHSLAERVAAQSDAIELRSINWRKFKDGFPNLFIPNAHGIRGQHVAFLASFSSPGKIFEQLSVIYALPKLFVSSFTLVLPFFPTGT******EGDVATAFTLARILSNIPTSRGGPTSLVTFDIHALQERFYFGDTILPCFESAIPLLLNRLQQLPDSDNISIAFPDDGAWKRFHKQLQHFPMVLRMPYVDLYCVHHAPA*****
******************************ANRSQTIQCGQIK**********************************************LFYCPETHSLAERVAAQSDAIELRSINWRKFKDGFPNLFIPNAHGIRGQHVAFLASFSSPGKIFEQLSVIYALPKLFVSSFTLVLPFFPTGTSERMEDEGDVATAFTLARILSNIPTSRGGPTSLVTFDIHALQERFYFGDTILPCFESAIPLLLNRLQQLPDSDNISIAFPDDGAWKRFHKQLQHFPMVLRMPYVDLY*V**********
********SQKPPSPLFLKFTSNCNSRLLCANRSQTIQCGQIKSFENQPQKWSIDFKSGSEPIHLIQN****************MKKVCLFYCPETHSLAERVAAQSDAIELRSINWRKFKDGFPNLFIPNAHGIRGQHVAFLASFSSPGKIFEQLSVIYALPKLFVSSFTLVLPFFPTGTSERMEDEGDVATAFTLARILSNIPTSRGGPTSLVTFDIHALQERFYFGDTILPCFESAIPLLLNRLQQLPDSDNISIAFPDDGAWKRFHKQLQHFPMVLRMPYVDLYCVHHAPAYKNSC
**TPAAFISQKPPSPLFLKFTSNCNSRLLCANRSQTIQCGQIKSFENQPQKWSIDFKSGSEPIHLIQNSTSTAATSASESASRTMKKVCLFYCPETHSLAERVAAQSDAIELRSINWRKFKDGFPNLFIPNAHGIRGQHVAFLASFSSPGKIFEQLSVIYALPKLFVSSFTLVLPFFPTGTSERMEDEGDVATAFTLARILSNIPTSRGGPTSLVTFDIHALQERFYFGDTILPCFESAIPLLLNRLQQLPDSDNISIAFPDDGAWKRFHKQLQHFPMVLRMPYVDLYCVHHAP******
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MKTPAAFISQKPPSPLFLKFTSNCNSRLLCANRSQTIQCGQIKSFENQPQKWSIDFKSGSEPIHLIQNSTSTAATSASESASRTMKKVCLFYCPETHSLAERVAAQSDAIELRSINWRKFKDGFPNLFIPNAHGIRGQHVAFLASFSSPGKIFEQLSVIYALPKLFVSSFTLVLPFFPTGTSERMEDEGDVATAFTLARILSNIPTSRGGPTSLVTFDIHALQERFYFGDTILPCFESAIPLLLNRLQQLPDSDNISIAFPDDGAWKRFHKQLQHFPMVLRMPYVDLYCVHHAPAYKNSC
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query300 2.2.26 [Sep-21-2011]
Q93Z66411 Ribose-phosphate pyrophos yes no 0.82 0.598 0.776 1e-109
Q9XGA0406 Ribose-phosphate pyrophos N/A no 0.826 0.610 0.735 1e-103
Q8S2E5409 Ribose-phosphate pyrophos yes no 0.743 0.545 0.748 2e-94
Q9XGA1318 Ribose-phosphate pyrophos N/A no 0.65 0.613 0.769 1e-86
Q680A5337 Ribose-phosphate pyrophos no no 0.65 0.578 0.738 3e-84
Q6ZFT5325 Ribose-phosphate pyrophos no no 0.66 0.609 0.762 6e-81
Q9PQV0 330 Ribose-phosphate pyrophos yes no 0.573 0.521 0.289 3e-11
Q9CHB8 324 Ribose-phosphate pyrophos yes no 0.573 0.530 0.290 7e-09
P65240 322 Ribose-phosphate pyrophos yes no 0.57 0.531 0.306 2e-08
P65239 322 Ribose-phosphate pyrophos yes no 0.57 0.531 0.306 2e-08
>sp|Q93Z66|KPRS3_ARATH Ribose-phosphate pyrophosphokinase 3, chloroplastic OS=Arabidopsis thaliana GN=PRS3 PE=2 SV=1 Back     alignment and function desciption
 Score =  393 bits (1010), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 194/250 (77%), Positives = 214/250 (85%), Gaps = 4/250 (1%)

Query: 34  SQTIQCGQIKSFENQPQKWSIDFKSGSEPIHLIQ-NSTS--TAATSASESASRTMKKVCL 90
           ++ I+CG ++S EN     S+DF S  +PI LI  NS+S  T A + SES S++ K+VCL
Sbjct: 45  NRCIKCG-VRSLENHSGHRSLDFLSNGDPISLINPNSSSPITMAAATSESGSKSSKRVCL 103

Query: 91  FYCPETHSLAERVAAQSDAIELRSINWRKFKDGFPNLFIPNAHGIRGQHVAFLASFSSPG 150
           F+  ET  LAER+ A+SD IELRSINW+KF DGFPNLFI NA GIRGQHVAFLASFSSP 
Sbjct: 104 FHSDETRDLAERIVAKSDCIELRSINWKKFDDGFPNLFIQNAQGIRGQHVAFLASFSSPA 163

Query: 151 KIFEQLSVIYALPKLFVSSFTLVLPFFPTGTSERMEDEGDVATAFTLARILSNIPTSRGG 210
            IFEQLSVIYALPKLFVSSFTLVLPFFPTGTSERMEDEGDVATAFTLARILSNIPTSRGG
Sbjct: 164 VIFEQLSVIYALPKLFVSSFTLVLPFFPTGTSERMEDEGDVATAFTLARILSNIPTSRGG 223

Query: 211 PTSLVTFDIHALQERFYFGDTILPCFESAIPLLLNRLQQLPDSDNISIAFPDDGAWKRFH 270
           PTSLVTFDIHALQERFYFGDTILPCFES IPLL +RLQ LPDSDNISIAFPDDGAWKRFH
Sbjct: 224 PTSLVTFDIHALQERFYFGDTILPCFESGIPLLKSRLQSLPDSDNISIAFPDDGAWKRFH 283

Query: 271 KQLQHFPMVL 280
           KQLQH+P ++
Sbjct: 284 KQLQHYPTIV 293

Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 7EC: .EC: 6EC: .EC: 1
>sp|Q9XGA0|KPRS3_SPIOL Ribose-phosphate pyrophosphokinase 3, mitochondrial OS=Spinacia oleracea GN=PRS3 PE=2 SV=1 Back     alignment and function description
>sp|Q8S2E5|KPRS3_ORYSJ Ribose-phosphate pyrophosphokinase 3, chloroplastic OS=Oryza sativa subsp. japonica GN=Os01g0723600 PE=2 SV=1 Back     alignment and function description
>sp|Q9XGA1|KPRS4_SPIOL Ribose-phosphate pyrophosphokinase 4 OS=Spinacia oleracea GN=PRS4 PE=2 SV=1 Back     alignment and function description
>sp|Q680A5|KPRS4_ARATH Ribose-phosphate pyrophosphokinase 4 OS=Arabidopsis thaliana GN=PRS4 PE=2 SV=2 Back     alignment and function description
>sp|Q6ZFT5|KPRS4_ORYSJ Ribose-phosphate pyrophosphokinase 4 OS=Oryza sativa subsp. japonica GN=Os02g0714600 PE=2 SV=1 Back     alignment and function description
>sp|Q9PQV0|KPRS_UREPA Ribose-phosphate pyrophosphokinase OS=Ureaplasma parvum serovar 3 (strain ATCC 700970) GN=prs PE=3 SV=1 Back     alignment and function description
>sp|Q9CHB8|KPRS1_LACLA Ribose-phosphate pyrophosphokinase 1 OS=Lactococcus lactis subsp. lactis (strain IL1403) GN=prs1 PE=3 SV=1 Back     alignment and function description
>sp|P65240|KPRS1_STRR6 Ribose-phosphate pyrophosphokinase 1 OS=Streptococcus pneumoniae (strain ATCC BAA-255 / R6) GN=prs1 PE=3 SV=1 Back     alignment and function description
>sp|P65239|KPRS1_STRPN Ribose-phosphate pyrophosphokinase 1 OS=Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4) GN=prs1 PE=3 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query300
4874278 421 Strong similarity to gi|4544471 F23E6.11 0.82 0.584 0.776 1e-107
15220191 411 ribose-phosphate pyrophosphokinase 3 [Ar 0.82 0.598 0.776 1e-107
297843888 469 F20B24.13 [Arabidopsis lyrata subsp. lyr 0.86 0.550 0.705 1e-104
6573738 459 F20B24.13 [Arabidopsis thaliana] 0.82 0.535 0.726 1e-104
255573997 407 Ribose-phosphate pyrophosphokinase, puta 0.883 0.651 0.691 1e-103
359495902399 PREDICTED: ribose-phosphate pyrophosphok 0.786 0.591 0.770 1e-102
296083416393 unnamed protein product [Vitis vinifera] 0.786 0.600 0.770 1e-102
62286956 406 RecName: Full=Ribose-phosphate pyrophosp 0.826 0.610 0.735 1e-101
4902470326 phosphoribosyl diphosphate synthase [Ara 0.69 0.634 0.850 1e-100
449434967 415 PREDICTED: ribose-phosphate pyrophosphok 0.806 0.583 0.718 1e-100
>gi|4874278|gb|AAD31343.1|AC007354_16 Strong similarity to gi|4544471 F23E6.11 from Arabidopsis thaliana BAC gb|AC006580. and is a member of the PF|00492 Phosphoribosyl pyrophosphate synthase family [Arabidopsis thaliana] Back     alignment and taxonomy information
 Score =  394 bits (1012), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 194/250 (77%), Positives = 214/250 (85%), Gaps = 4/250 (1%)

Query: 34  SQTIQCGQIKSFENQPQKWSIDFKSGSEPIHLIQ-NSTS--TAATSASESASRTMKKVCL 90
           ++ I+CG ++S EN     S+DF S  +PI LI  NS+S  T A + SES S++ K+VCL
Sbjct: 45  NRCIKCG-VRSLENHSGHRSLDFLSNGDPISLINPNSSSPITMAAATSESGSKSSKRVCL 103

Query: 91  FYCPETHSLAERVAAQSDAIELRSINWRKFKDGFPNLFIPNAHGIRGQHVAFLASFSSPG 150
           F+  ET  LAER+ A+SD IELRSINW+KF DGFPNLFI NA GIRGQHVAFLASFSSP 
Sbjct: 104 FHSDETRDLAERIVAKSDCIELRSINWKKFDDGFPNLFIQNAQGIRGQHVAFLASFSSPA 163

Query: 151 KIFEQLSVIYALPKLFVSSFTLVLPFFPTGTSERMEDEGDVATAFTLARILSNIPTSRGG 210
            IFEQLSVIYALPKLFVSSFTLVLPFFPTGTSERMEDEGDVATAFTLARILSNIPTSRGG
Sbjct: 164 VIFEQLSVIYALPKLFVSSFTLVLPFFPTGTSERMEDEGDVATAFTLARILSNIPTSRGG 223

Query: 211 PTSLVTFDIHALQERFYFGDTILPCFESAIPLLLNRLQQLPDSDNISIAFPDDGAWKRFH 270
           PTSLVTFDIHALQERFYFGDTILPCFES IPLL +RLQ LPDSDNISIAFPDDGAWKRFH
Sbjct: 224 PTSLVTFDIHALQERFYFGDTILPCFESGIPLLKSRLQSLPDSDNISIAFPDDGAWKRFH 283

Query: 271 KQLQHFPMVL 280
           KQLQH+P ++
Sbjct: 284 KQLQHYPTIV 293

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|15220191|ref|NP_172540.1| ribose-phosphate pyrophosphokinase 3 [Arabidopsis thaliana] gi|62286943|sp|Q93Z66.1|KPRS3_ARATH RecName: Full=Ribose-phosphate pyrophosphokinase 3, chloroplastic; AltName: Full=Phosphoribosyl pyrophosphate synthase 3; Flags: Precursor gi|16604386|gb|AAL24199.1| At1g10700/F20B24.13 [Arabidopsis thaliana] gi|19699210|gb|AAL90971.1| At1g10700/F20B24.13 [Arabidopsis thaliana] gi|332190509|gb|AEE28630.1| ribose-phosphate pyrophosphokinase 3 [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|297843888|ref|XP_002889825.1| F20B24.13 [Arabidopsis lyrata subsp. lyrata] gi|297335667|gb|EFH66084.1| F20B24.13 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|6573738|gb|AAF17658.1|AC009398_7 F20B24.13 [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|255573997|ref|XP_002527916.1| Ribose-phosphate pyrophosphokinase, putative [Ricinus communis] gi|223532691|gb|EEF34473.1| Ribose-phosphate pyrophosphokinase, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|359495902|ref|XP_002272590.2| PREDICTED: ribose-phosphate pyrophosphokinase 3, mitochondrial [Vitis vinifera] Back     alignment and taxonomy information
>gi|296083416|emb|CBI23369.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|62286956|sp|Q9XGA0.1|KPRS3_SPIOL RecName: Full=Ribose-phosphate pyrophosphokinase 3, mitochondrial; AltName: Full=Phosphoribosyl pyrophosphate synthase 3; Flags: Precursor gi|4902877|emb|CAB43601.1| phosphoribosyl pyrophosphate synthase isozyme 3 [Spinacia oleracea] Back     alignment and taxonomy information
>gi|4902470|emb|CAB43552.1| phosphoribosyl diphosphate synthase [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|449434967|ref|XP_004135267.1| PREDICTED: ribose-phosphate pyrophosphokinase 3, mitochondrial-like [Cucumis sativus] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query300
TAIR|locus:2019973411 PRS3 "phosphoribosyl pyrophosp 0.86 0.627 0.715 9.7e-96
TAIR|locus:2045590337 AT2G42910 [Arabidopsis thalian 0.65 0.578 0.738 1.5e-76
UNIPROTKB|D3YTJ7200 PRPS2 "Ribose-phosphate pyroph 0.586 0.88 0.264 2.3e-06
TIGR_CMR|GSU_0661 314 GSU_0661 "ribose-phosphate pyr 0.593 0.566 0.253 5.4e-06
UNIPROTKB|Q7ZXC9 318 prps2 "Ribose-phosphate pyroph 0.58 0.547 0.267 1.2e-05
UNIPROTKB|Q5ZI49 325 PRPS2 "Ribose-phosphate pyroph 0.593 0.547 0.263 1.7e-05
UNIPROTKB|Q5XGI0 318 prps2 "Ribose-phosphate pyroph 0.58 0.547 0.262 6.1e-05
UNIPROTKB|F1NIP5 326 PRPS1 "Ribose-phosphate pyroph 0.58 0.533 0.245 0.00014
UNIPROTKB|P65232 326 prs "Ribose-phosphate pyrophos 0.56 0.515 0.256 0.00018
TAIR|locus:2062405 403 AT2G35390 [Arabidopsis thalian 0.6 0.446 0.237 0.00021
TAIR|locus:2019973 PRS3 "phosphoribosyl pyrophosphate (PRPP) synthase 3" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 952 (340.2 bits), Expect = 9.7e-96, P = 9.7e-96
 Identities = 194/271 (71%), Positives = 212/271 (78%)

Query:    14 SPLFLKF-TSNCNSRLLCANRSQTIQCGQIKSFENQPQKWSIDFKSGSEPIHLIQ-NXXX 71
             SP FL F T++ ++R  C      I+CG ++S EN     S+DF S  +PI LI  N   
Sbjct:    32 SPSFLNFKTASVSNR--C------IKCG-VRSLENHSGHRSLDFLSNGDPISLINPNSSS 82

Query:    72 --XXXXXXXXXXXXXMKKVCLFYCPETHSLAERVAAQSDAIELRSINWRKFKDGFPNLFI 129
                             K+VCLF+  ET  LAER+ A+SD IELRSINW+KF DGFPNLFI
Sbjct:    83 PITMAAATSESGSKSSKRVCLFHSDETRDLAERIVAKSDCIELRSINWKKFDDGFPNLFI 142

Query:   130 PNAHGIRGQHVAFLASFSSPGKIFEQLSVIYALPKLFVSSFTLVLPFFPTGTSERMEDEG 189
              NA GIRGQHVAFLASFSSP  IFEQLSVIYALPKLFVSSFTLVLPFFPTGTSERMEDEG
Sbjct:   143 QNAQGIRGQHVAFLASFSSPAVIFEQLSVIYALPKLFVSSFTLVLPFFPTGTSERMEDEG 202

Query:   190 DVATAFTLARILSNIPTSRGGPTSLVTFDIHALQERFYFGDTILPCFESAIPLLLNRLQQ 249
             DVATAFTLARILSNIPTSRGGPTSLVTFDIHALQERFYFGDTILPCFES IPLL +RLQ 
Sbjct:   203 DVATAFTLARILSNIPTSRGGPTSLVTFDIHALQERFYFGDTILPCFESGIPLLKSRLQS 262

Query:   250 LPDSDNISIAFPDDGAWKRFHKQLQHFPMVL 280
             LPDSDNISIAFPDDGAWKRFHKQLQH+P ++
Sbjct:   263 LPDSDNISIAFPDDGAWKRFHKQLQHYPTIV 293
GO:0000287 "magnesium ion binding" evidence=IEA
GO:0004749 "ribose phosphate diphosphokinase activity" evidence=IEA;ISS
GO:0009116 "nucleoside metabolic process" evidence=IEA
GO:0009165 "nucleotide biosynthetic process" evidence=IEA;ISS
GO:0009507 "chloroplast" evidence=ISM
GO:0006783 "heme biosynthetic process" evidence=RCA
TAIR|locus:2045590 AT2G42910 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
UNIPROTKB|D3YTJ7 PRPS2 "Ribose-phosphate pyrophosphokinase 2" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
TIGR_CMR|GSU_0661 GSU_0661 "ribose-phosphate pyrophosphokinase" [Geobacter sulfurreducens PCA (taxid:243231)] Back     alignment and assigned GO terms
UNIPROTKB|Q7ZXC9 prps2 "Ribose-phosphate pyrophosphokinase 2" [Xenopus laevis (taxid:8355)] Back     alignment and assigned GO terms
UNIPROTKB|Q5ZI49 PRPS2 "Ribose-phosphate pyrophosphokinase 2" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
UNIPROTKB|Q5XGI0 prps2 "Ribose-phosphate pyrophosphokinase 2" [Xenopus (Silurana) tropicalis (taxid:8364)] Back     alignment and assigned GO terms
UNIPROTKB|F1NIP5 PRPS1 "Ribose-phosphate pyrophosphokinase" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
UNIPROTKB|P65232 prs "Ribose-phosphate pyrophosphokinase" [Mycobacterium tuberculosis (taxid:1773)] Back     alignment and assigned GO terms
TAIR|locus:2062405 AT2G35390 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q8S2E5KPRS3_ORYSJ2, ., 7, ., 6, ., 10.74880.74330.5452yesno
Q9XGA0KPRS3_SPIOL2, ., 7, ., 6, ., 10.73510.82660.6108N/Ano
Q9XGA1KPRS4_SPIOL2, ., 7, ., 6, ., 10.76920.650.6132N/Ano
Q93Z66KPRS3_ARATH2, ., 7, ., 6, ., 10.7760.820.5985yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer2.7.60.921
4th Layer2.7.6.10.914

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query300
PLN02297326 PLN02297, PLN02297, ribose-phosphate pyrophosphoki 1e-153
COG0462 314 COG0462, PrsA, Phosphoribosylpyrophosphate synthet 6e-16
TIGR01251 308 TIGR01251, ribP_PPkin, ribose-phosphate pyrophosph 1e-14
PRK02269 320 PRK02269, PRK02269, ribose-phosphate pyrophosphoki 2e-09
PRK02458 323 PRK02458, PRK02458, ribose-phosphate pyrophosphoki 2e-07
PRK00934285 PRK00934, PRK00934, ribose-phosphate pyrophosphoki 5e-06
PRK04923 319 PRK04923, PRK04923, ribose-phosphate pyrophosphoki 3e-05
PRK03092 304 PRK03092, PRK03092, ribose-phosphate pyrophosphoki 3e-05
PRK01259 309 PRK01259, PRK01259, ribose-phosphate pyrophosphoki 1e-04
>gnl|CDD|177934 PLN02297, PLN02297, ribose-phosphate pyrophosphokinase Back     alignment and domain information 
 Score =  430 bits (1107), Expect = e-153
 Identities = 171/208 (82%), Positives = 181/208 (87%)

Query: 72  TAATSASESASRTMKKVCLFYCPETHSLAERVAAQSDAIELRSINWRKFKDGFPNLFIPN 131
           TAA     S+ +  K+V LFYC ET  LA ++AA+SDAIEL SINWRKF DGFPNLFI N
Sbjct: 1   TAAAVKRASSKKNKKQVHLFYCEETEELARKIAAESDAIELGSINWRKFPDGFPNLFINN 60

Query: 132 AHGIRGQHVAFLASFSSPGKIFEQLSVIYALPKLFVSSFTLVLPFFPTGTSERMEDEGDV 191
           AHGIRGQHVAFLASFSSP  IFEQLSVIYALPKLFV+SFTLVLPFFPTGTSER+E EGDV
Sbjct: 61  AHGIRGQHVAFLASFSSPAVIFEQLSVIYALPKLFVASFTLVLPFFPTGTSERVEREGDV 120

Query: 192 ATAFTLARILSNIPTSRGGPTSLVTFDIHALQERFYFGDTILPCFESAIPLLLNRLQQLP 251
           ATAFTLARILSNIP SRGGPTSLV FDIHALQERFYFGD +LPCFES IPLL  RLQQLP
Sbjct: 121 ATAFTLARILSNIPISRGGPTSLVIFDIHALQERFYFGDNVLPCFESGIPLLKKRLQQLP 180

Query: 252 DSDNISIAFPDDGAWKRFHKQLQHFPMV 279
           DSDNI IAFPDDGAWKRFHKQ +HFPMV
Sbjct: 181 DSDNIVIAFPDDGAWKRFHKQFEHFPMV 208

Length = 326
>gnl|CDD|223538 COG0462, PrsA, Phosphoribosylpyrophosphate synthetase [Nucleotide transport and metabolism / Amino acid transport and metabolism] Back     alignment and domain information
>gnl|CDD|130318 TIGR01251, ribP_PPkin, ribose-phosphate pyrophosphokinase Back     alignment and domain information
>gnl|CDD|167353 PRK02269, PRK02269, ribose-phosphate pyrophosphokinase; Provisional Back     alignment and domain information
>gnl|CDD|235039 PRK02458, PRK02458, ribose-phosphate pyrophosphokinase; Provisional Back     alignment and domain information
>gnl|CDD|234868 PRK00934, PRK00934, ribose-phosphate pyrophosphokinase; Provisional Back     alignment and domain information
>gnl|CDD|179893 PRK04923, PRK04923, ribose-phosphate pyrophosphokinase; Provisional Back     alignment and domain information
>gnl|CDD|179535 PRK03092, PRK03092, ribose-phosphate pyrophosphokinase; Provisional Back     alignment and domain information
>gnl|CDD|234929 PRK01259, PRK01259, ribose-phosphate pyrophosphokinase; Provisional Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 300
COG0462 314 PrsA Phosphoribosylpyrophosphate synthetase [Nucle 100.0
PLN02297326 ribose-phosphate pyrophosphokinase 100.0
PRK00553 332 ribose-phosphate pyrophosphokinase; Provisional 100.0
PRK04923 319 ribose-phosphate pyrophosphokinase; Provisional 100.0
PRK02812 330 ribose-phosphate pyrophosphokinase; Provisional 100.0
PRK02269 320 ribose-phosphate pyrophosphokinase; Provisional 100.0
PTZ00145 439 phosphoribosylpyrophosphate synthetase; Provisiona 100.0
PRK02458 323 ribose-phosphate pyrophosphokinase; Provisional 100.0
KOG1448 316 consensus Ribose-phosphate pyrophosphokinase [Nucl 100.0
PRK07199 301 phosphoribosylpyrophosphate synthetase; Provisiona 100.0
PRK01259 309 ribose-phosphate pyrophosphokinase; Provisional 100.0
PRK03092 304 ribose-phosphate pyrophosphokinase; Provisional 100.0
PRK00934285 ribose-phosphate pyrophosphokinase; Provisional 100.0
PRK06827 382 phosphoribosylpyrophosphate synthetase; Provisiona 100.0
TIGR01251 308 ribP_PPkin ribose-phosphate pyrophosphokinase. In 100.0
PLN02369 302 ribose-phosphate pyrophosphokinase 100.0
KOG1503 354 consensus Phosphoribosylpyrophosphate synthetase-a 100.0
PF13793116 Pribosyltran_N: N-terminal domain of ribose phosph 100.0
TIGR01251308 ribP_PPkin ribose-phosphate pyrophosphokinase. In 98.57
PRK13811170 orotate phosphoribosyltransferase; Provisional 97.7
PRK07199301 phosphoribosylpyrophosphate synthetase; Provisiona 97.07
PRK04923319 ribose-phosphate pyrophosphokinase; Provisional 96.93
PRK00934285 ribose-phosphate pyrophosphokinase; Provisional 96.74
PRK03092304 ribose-phosphate pyrophosphokinase; Provisional 96.73
PLN02369302 ribose-phosphate pyrophosphokinase 96.58
PRK02458323 ribose-phosphate pyrophosphokinase; Provisional 96.47
PRK02269320 ribose-phosphate pyrophosphokinase; Provisional 96.28
PRK02812330 ribose-phosphate pyrophosphokinase; Provisional 96.28
PRK01259309 ribose-phosphate pyrophosphokinase; Provisional 96.23
PTZ00145439 phosphoribosylpyrophosphate synthetase; Provisiona 96.22
PRK00553332 ribose-phosphate pyrophosphokinase; Provisional 95.76
PRK06827382 phosphoribosylpyrophosphate synthetase; Provisiona 95.03
COG0462314 PrsA Phosphoribosylpyrophosphate synthetase [Nucle 93.27
PRK15423178 hypoxanthine phosphoribosyltransferase; Provisiona 92.8
PRK09162181 hypoxanthine-guanine phosphoribosyltransferase; Pr 92.03
PLN02297326 ribose-phosphate pyrophosphokinase 90.09
PRK00129209 upp uracil phosphoribosyltransferase; Reviewed 89.46
TIGR01203166 HGPRTase hypoxanthine phosphoribosyltransferase. S 88.24
PF14572184 Pribosyl_synth: Phosphoribosyl synthetase-associat 88.16
PLN02501 794 digalactosyldiacylglycerol synthase 87.92
PTZ00271211 hypoxanthine-guanine phosphoribosyltransferase; Pr 86.85
TIGR01091207 upp uracil phosphoribosyltransferase. that include 86.15
PLN02238189 hypoxanthine phosphoribosyltransferase 85.83
PRK13812176 orotate phosphoribosyltransferase; Provisional 85.11
PLN02440479 amidophosphoribosyltransferase 82.14
PRK07272484 amidophosphoribosyltransferase; Provisional 81.63
>COG0462 PrsA Phosphoribosylpyrophosphate synthetase [Nucleotide transport and metabolism / Amino acid transport and metabolism] Back     alignment and domain information 
Probab=100.00  E-value=1.1e-59  Score=445.50  Aligned_cols=193  Identities=26%  Similarity=0.376  Sum_probs=183.9

Q ss_pred             CCcEEEEeCCCCHHHHHHHHHHhCCCceeeeEEeeeCCCCeeEEeecCCCCCCCeEEEEeecCCc--hhHHHHHHHHHhc
Q 022268           85 MKKVCLFYCPETHSLAERVAAQSDAIELRSINWRKFKDGFPNLFIPNAHGIRGQHVAFLASFSSP--GKIFEQLSVIYAL  162 (300)
Q Consensus        85 ~~~~~Ifsgsss~~LA~~IA~~L~gi~l~~i~~~rFpDGE~Ei~V~i~esVrG~dV~IIqS~~~p--d~lmELLllidAl  162 (300)
                      +++|+||+|+++++||++||+.| |+++++++.++||||  |++|++.|+|||+||||+|++++|  |+|||||+|+|||
T Consensus         2 ~~~~~if~g~s~~~La~~ia~~l-~~~l~~~~~~rF~DG--E~~V~i~EsVrg~dVfI~qs~~~pvnd~lmELLi~idA~   78 (314)
T COG0462           2 MNNMKIFSGSSNPELAEKIAKRL-GIPLGKVEVKRFPDG--EIYVRIEESVRGKDVFIIQSTSPPVNDNLMELLIMIDAL   78 (314)
T ss_pred             CCceEEEECCCCHHHHHHHHHHh-CCCcccceeEEcCCC--cEEEEecccccCCeEEEEeCCCCCcCHHHHHHHHHHHHH
Confidence            57899999999999999999999 799999999999999  699999999999999999999986  7899999999999


Q ss_pred             ccCCCceEEEEeccCCCccccccCCCCCcccHHHHHHHHhcCCCCCCCCCEEEEecCChhhhhcccCCCcccCCcccHHH
Q 022268          163 PKLFVSSFTLVLPFFPTGTSERMEDEGDVATAFTLARILSNIPTSRGGPTSLVTFDIHALQERFYFGDTILPCFESAIPL  242 (300)
Q Consensus       163 rragAk~ItlVIPYf~YARQDR~~~~Ge~isak~vA~lL~slp~~~aG~drVItvDlHs~qi~~fF~~~v~~l~L~a~~l  242 (300)
                      |++||++||+||||||||||||++++|||||+|++|+||+     ++|+|||+|||||++|+||||++|+++  |++.|.
T Consensus        79 k~asA~~It~ViPY~gYARQDk~~~~repIsaklvA~lL~-----~aG~drv~TvDlH~~qiqgfFdipvdn--l~a~p~  151 (314)
T COG0462          79 KRASAKRITAVIPYFGYARQDKAFKPREPISAKLVANLLE-----TAGADRVLTVDLHAPQIQGFFDIPVDN--LYAAPL  151 (314)
T ss_pred             HhcCCceEEEEeecchhhccCcccCCCCCEeHHHHHHHHH-----HcCCCeEEEEcCCchhhcccCCCcccc--ccchHH
Confidence            9999999999999999999999999999999999999999     569999999999999999999999995  699999


Q ss_pred             HHHHHhcCCCCCCeEEEeCCcccHHHHHHHHhhCCCccccccccccCCceeeeeecC
Q 022268          243 LLNRLQQLPDSDNISIAFPDDGAWKRFHKQLQHFPMVLRMPYVDLYCVHHAPAYKNS  299 (300)
Q Consensus       243 L~~~l~~~~~~~n~vIVSPD~GA~kRA~~~A~~l~~vv~~~~~~~lg~~~a~~~k~~  299 (300)
                      +++|+++..+.+|+||||||.||++||+.+|            +.||+++++++|+.
T Consensus       152 l~~~~~~~~~~~d~vVVSPD~Ggv~RAr~~A------------~~L~~~~a~i~K~R  196 (314)
T COG0462         152 LAEYIREKYDLDDPVVVSPDKGGVKRARALA------------DRLGAPLAIIDKRR  196 (314)
T ss_pred             HHHHHHHhcCCCCcEEECCCccHHHHHHHHH------------HHhCCCEEEEEEee
Confidence            9999988545567999999999999999999            99999999999973

>PLN02297 ribose-phosphate pyrophosphokinase Back     alignment and domain information
>PRK00553 ribose-phosphate pyrophosphokinase; Provisional Back     alignment and domain information
>PRK04923 ribose-phosphate pyrophosphokinase; Provisional Back     alignment and domain information
>PRK02812 ribose-phosphate pyrophosphokinase; Provisional Back     alignment and domain information
>PRK02269 ribose-phosphate pyrophosphokinase; Provisional Back     alignment and domain information
>PTZ00145 phosphoribosylpyrophosphate synthetase; Provisional Back     alignment and domain information
>PRK02458 ribose-phosphate pyrophosphokinase; Provisional Back     alignment and domain information
>KOG1448 consensus Ribose-phosphate pyrophosphokinase [Nucleotide transport and metabolism; Amino acid transport and metabolism] Back     alignment and domain information
>PRK07199 phosphoribosylpyrophosphate synthetase; Provisional Back     alignment and domain information
>PRK01259 ribose-phosphate pyrophosphokinase; Provisional Back     alignment and domain information
>PRK03092 ribose-phosphate pyrophosphokinase; Provisional Back     alignment and domain information
>PRK00934 ribose-phosphate pyrophosphokinase; Provisional Back     alignment and domain information
>PRK06827 phosphoribosylpyrophosphate synthetase; Provisional Back     alignment and domain information
>TIGR01251 ribP_PPkin ribose-phosphate pyrophosphokinase Back     alignment and domain information
>PLN02369 ribose-phosphate pyrophosphokinase Back     alignment and domain information
>KOG1503 consensus Phosphoribosylpyrophosphate synthetase-associated protein [Amino acid transport and metabolism; Nucleotide transport and metabolism] Back     alignment and domain information
>PF13793 Pribosyltran_N: N-terminal domain of ribose phosphate pyrophosphokinase; PDB: 2JI4_A 1DKU_B 1IBS_B 1DKR_B 3MBI_C 3LRT_B 3LPN_B 3NAG_B 2H07_B 2H06_B Back     alignment and domain information
>TIGR01251 ribP_PPkin ribose-phosphate pyrophosphokinase Back     alignment and domain information
>PRK13811 orotate phosphoribosyltransferase; Provisional Back     alignment and domain information
>PRK07199 phosphoribosylpyrophosphate synthetase; Provisional Back     alignment and domain information
>PRK04923 ribose-phosphate pyrophosphokinase; Provisional Back     alignment and domain information
>PRK00934 ribose-phosphate pyrophosphokinase; Provisional Back     alignment and domain information
>PRK03092 ribose-phosphate pyrophosphokinase; Provisional Back     alignment and domain information
>PLN02369 ribose-phosphate pyrophosphokinase Back     alignment and domain information
>PRK02458 ribose-phosphate pyrophosphokinase; Provisional Back     alignment and domain information
>PRK02269 ribose-phosphate pyrophosphokinase; Provisional Back     alignment and domain information
>PRK02812 ribose-phosphate pyrophosphokinase; Provisional Back     alignment and domain information
>PRK01259 ribose-phosphate pyrophosphokinase; Provisional Back     alignment and domain information
>PTZ00145 phosphoribosylpyrophosphate synthetase; Provisional Back     alignment and domain information
>PRK00553 ribose-phosphate pyrophosphokinase; Provisional Back     alignment and domain information
>PRK06827 phosphoribosylpyrophosphate synthetase; Provisional Back     alignment and domain information
>COG0462 PrsA Phosphoribosylpyrophosphate synthetase [Nucleotide transport and metabolism / Amino acid transport and metabolism] Back     alignment and domain information
>PRK15423 hypoxanthine phosphoribosyltransferase; Provisional Back     alignment and domain information
>PRK09162 hypoxanthine-guanine phosphoribosyltransferase; Provisional Back     alignment and domain information
>PLN02297 ribose-phosphate pyrophosphokinase Back     alignment and domain information
>PRK00129 upp uracil phosphoribosyltransferase; Reviewed Back     alignment and domain information
>TIGR01203 HGPRTase hypoxanthine phosphoribosyltransferase Back     alignment and domain information
>PF14572 Pribosyl_synth: Phosphoribosyl synthetase-associated domain; PDB: 2H07_B 2H06_B 3S5J_B 2HCR_A 3EFH_A 2H08_A 1DKR_B 1DKU_B 1IBS_B 2JI4_A Back     alignment and domain information
>PLN02501 digalactosyldiacylglycerol synthase Back     alignment and domain information
>PTZ00271 hypoxanthine-guanine phosphoribosyltransferase; Provisional Back     alignment and domain information
>TIGR01091 upp uracil phosphoribosyltransferase Back     alignment and domain information
>PLN02238 hypoxanthine phosphoribosyltransferase Back     alignment and domain information
>PRK13812 orotate phosphoribosyltransferase; Provisional Back     alignment and domain information
>PLN02440 amidophosphoribosyltransferase Back     alignment and domain information
>PRK07272 amidophosphoribosyltransferase; Provisional Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query300
2h07_A 326 Crystal Structure Of Human Phosphoribosyl Pyrophosp 2e-04
2h06_A 326 Crystal Structure Of Human Phosphoribosyl Pyrophosp 2e-04
2h08_A 326 Crystal Structure Of Human Phosphoribosyl Pyrophosp 3e-04
2ji4_A 379 Human Phosphoribosylpyrophosphate Synthetase - Asso 5e-04
2c4k_A 370 Crystal Structure Of Human Phosphoribosylpyrophosph 5e-04
3dah_A 319 2.3 A Crystal Structure Of Ribose-Phosphate Pyropho 6e-04
>pdb|2H07|A Chain A, Crystal Structure Of Human Phosphoribosyl Pyrophosphate Synthetase 1 Mutant S132a Length = 326 Back     alignment and structure 
Iteration: 1

 Score = 43.5 bits (101), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 46/188 (24%), Positives = 86/188 (45%), Gaps = 13/188 (6%)
Query: 85  MKKVCLFYCPETHSLAERVAAQSDAIELRSINWRKFKDGFPNLFIPNAHGIRGQHVAFLA 144
           M  + +F       L++++A +   +EL  +  +KF +    + I     +RG+ V  + 
Sbjct: 1   MPNIKIFSGSSHQDLSQKIADRL-GLELGKVVTKKFSNQETCVEI--GESVRGEDVYIVQ 57
Query: 145 SFSSP--GKIFEQLSVIYALPKLFVSSFTLVLPFFPTGTSERMEDEGDVATAFTLARILS 202
           S        + E L +I A      S  T V+P FP       +D+ D + A   A++++
Sbjct: 58  SGCGEINDNLMELLIMINACKIASASRVTAVIPCFPYAR----QDKKDKSRAPISAKLVA 113
Query: 203 NIPTSRGGPTSLVTFDIHALQERFYFGDTILPCFESAIPLLLNRLQQ-LPDSDNISIAFP 261
           N+  S  G   ++T D+HA Q + +F   +   +  A P +L  +++ + +  N +I  P
Sbjct: 114 NM-LSVAGADHIITMDLHAAQIQGFFDIPVDNLY--AEPAVLKWIRENISEWRNCTIVSP 170
Query: 262 DDGAWKRF 269
           D G  KR 
Sbjct: 171 DAGGAKRV 178
>pdb|2H06|A Chain A, Crystal Structure Of Human Phosphoribosyl Pyrophosphate Synthetase 1 Length = 326 Back     alignment and structure
>pdb|2H08|A Chain A, Crystal Structure Of Human Phosphoribosyl Pyrophosphate Synthetase 1 Mutant Y146m Length = 326 Back     alignment and structure
>pdb|2JI4|A Chain A, Human Phosphoribosylpyrophosphate Synthetase - Associated Protein 41 (Pap41) Length = 379 Back     alignment and structure
>pdb|2C4K|A Chain A, Crystal Structure Of Human Phosphoribosylpyrophosphate Synthetase-Associated Protein 39 (Pap39) Length = 370 Back     alignment and structure
>pdb|3DAH|A Chain A, 2.3 A Crystal Structure Of Ribose-Phosphate Pyrophosphokinase From Burkholderia Pseudomallei Length = 319 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query300
2ji4_A 379 Phosphoribosyl pyrophosphate synthetase-associated 1e-06
3lrt_A286 Ribose-phosphate pyrophosphokinase; phosphoribosyl 1e-06
3dah_A 319 Ribose-phosphate pyrophosphokinase; pyrophosphoki 7e-05
>2ji4_A Phosphoribosyl pyrophosphate synthetase-associated protein 2; phosphorylation, nucleotide biosynthesis, transferase; 2.55A {Homo sapiens} PDB: 2c4k_A* Length = 379 Back     alignment and structure
 Score = 48.5 bits (116), Expect = 1e-06
 Identities = 45/214 (21%), Positives = 83/214 (38%), Gaps = 23/214 (10%)

Query: 64  HLIQNSTSTAATSASESASRTMKKVCLFYC---PETHSLAERVAAQSDAIELRSINWRKF 120
           H              +S + T   + LF          L++++A +   +E+  +   + 
Sbjct: 6   HHSSGVDLGTENLYFQSMNITKGGLVLFSANSNSSCMELSKKIAERLG-VEMGKVQVYQE 64

Query: 121 KDGFPNLFIPNAHGIRGQHVAFLASFSSPG--KIFEQLSVIYALPKLFVSSFTLVLPFFP 178
            +      +     +RG+ V  + + S      I E L ++YA       S   V+P+FP
Sbjct: 65  PNR--ETRVQIQESVRGKDVFIIQTVSKDVNTTIMELLIMVYACKTSCAKSIIGVIPYFP 122

Query: 179 TGTSERMEDEGDVATAFTLARILSNIPTSRGGPTSLVTFDIHALQERFYFG---DTILPC 235
                +M   G +  +  LA ++      + G T L+T D+H  + + +F    D +   
Sbjct: 123 YSKQCKMRKRGSI-VSKLLASMMC-----KAGLTHLITMDLHQKEIQGFFNIPVDNLR-- 174

Query: 236 FESAIPLLLNRLQ-QLPDSDNISIAFPDDGAWKR 268
              A P LL  +Q ++PD  N  I      + KR
Sbjct: 175 ---ASPFLLQYIQEEIPDYRNAVIVAKSPASAKR 205
>3lrt_A Ribose-phosphate pyrophosphokinase; phosphoribosyl transferase, ATP analog binding, ATP-binding, metal-binding, nucleotide biosynthesis; HET: ADP; 1.53A {Thermoplasma volcanium} PDB: 3lpn_A* 3nag_A* 3mbi_A* Length = 286 Back     alignment and structure
>3dah_A Ribose-phosphate pyrophosphokinase; pyrophosphoki seattle structural genomics center for infectious disease, magnesium, metal binding; HET: AMP; 2.30A {Burkholderia pseudomallei} Length = 319 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query300
3s5j_B 326 Ribose-phosphate pyrophosphokinase 1; nucleotide s 100.0
3dah_A 319 Ribose-phosphate pyrophosphokinase; pyrophosphoki 100.0
3lrt_A286 Ribose-phosphate pyrophosphokinase; phosphoribosyl 100.0
1u9y_A284 RPPK;, ribose-phosphate pyrophosphokinase; PRPP sy 100.0
2ji4_A 379 Phosphoribosyl pyrophosphate synthetase-associated 100.0
1dku_A 317 Protein (phosphoribosyl pyrophosphate synthetase); 100.0
1dqn_A 230 Guanine phosphoribosyltransferase; protein-inhibit 98.0
2aee_A211 OPRT, oprtase, orotate phosphoribosyltransferase; 97.8
3s5j_B326 Ribose-phosphate pyrophosphokinase 1; nucleotide s 96.43
3dah_A319 Ribose-phosphate pyrophosphokinase; pyrophosphoki 96.13
3lrt_A286 Ribose-phosphate pyrophosphokinase; phosphoribosyl 95.74
3dez_A243 OPRT, oprtase, orotate phosphoribosyltransferase; 94.25
1pzm_A 211 HGPRT, hypoxanthine-guanine phosphoribosyltransfer 94.16
1o5o_A221 Uracil phosphoribosyltransferase; TM0721, structur 93.99
2yzk_A178 OPRT, oprtase, orotate phosphoribosyltransferase; 93.76
1dku_A317 Protein (phosphoribosyl pyrophosphate synthetase); 93.73
2wns_A205 Orotate phosphoribosyltransferase; alternative spl 93.62
2ji4_A379 Phosphoribosyl pyrophosphate synthetase-associated 93.5
3hvu_A204 Hypoxanthine phosphoribosyltransferase; hypoxanthi 93.02
2e55_A208 Uracil phosphoribosyltransferase; structural genom 91.95
3o7m_A186 Hypoxanthine phosphoribosyltransferase; hypoxanthi 91.61
2geb_A185 Hypoxanthine-guanine phosphoribosyltransferase; HG 91.6
2ehj_A208 Uracil phosphoribosyltransferase; structural genom 91.43
1wd5_A208 Hypothetical protein TT1426; structural genomics, 91.14
3qw4_B453 UMP synthase; N-terminal orotidine monophosphate d 90.93
2ywu_A181 Hypoxanthine-guanine phosphoribosyltransferase; ro 90.86
3ohp_A177 Hypoxanthine phosphoribosyltransferase; structural 90.33
1bd3_D243 Uprtase, uracil phosphoribosyltransferase; glycosy 89.98
1u9y_A284 RPPK;, ribose-phosphate pyrophosphokinase; PRPP sy 88.6
1hgx_A183 HGXPRTASE, hypoxanthine-guanine-xanthine phosphori 88.45
1v9s_A208 Uracil phosphoribosyltransferase; pyrimidine salva 88.27
1yfz_A205 Hypoxanthine-guanine phosphoribosyltransferase; pr 88.14
1ecf_A504 Glutamine phosphoribosylpyrophosphate amidotransf; 87.51
1ao0_A459 Glutamine phosphoribosylpyrophosphate amidotransfe 87.29
1vdm_A153 Purine phosphoribosyltransferase; structural genom 85.69
1tc1_A220 Protein (hypoxanthine phosphoribosyltransferase); 83.61
3m3h_A234 OPRT, oprtase, orotate phosphoribosyltransferase; 82.0
1o57_A 291 PUR operon repressor; purine operon repressor, hel 81.04
1pzm_A211 HGPRT, hypoxanthine-guanine phosphoribosyltransfer 81.02
1zn8_A180 APRT, adenine phosphoribosyltransferase; glycosylt 80.82
1i5e_A209 Uracil phosphoribosyltransferase; salvage pathway; 80.47
2aee_A211 OPRT, oprtase, orotate phosphoribosyltransferase; 80.15
>3s5j_B Ribose-phosphate pyrophosphokinase 1; nucleotide synthesis, transferase; 2.02A {Homo sapiens} PDB: 2hcr_A* 3efh_A 2h06_A 2h07_A 2h08_A Back     alignment and structure
Probab=100.00  E-value=6e-57  Score=429.73  Aligned_cols=192  Identities=24%  Similarity=0.333  Sum_probs=178.0

Q ss_pred             CCcEEEEeCCCCHHHHHHHHHHhCCCceeeeEEeeeCCCCeeEEeecCCCCCCCeEEEEeecCCc--hhHHHHHHHHHhc
Q 022268           85 MKKVCLFYCPETHSLAERVAAQSDAIELRSINWRKFKDGFPNLFIPNAHGIRGQHVAFLASFSSP--GKIFEQLSVIYAL  162 (300)
Q Consensus        85 ~~~~~Ifsgsss~~LA~~IA~~L~gi~l~~i~~~rFpDGE~Ei~V~i~esVrG~dV~IIqS~~~p--d~lmELLllidAl  162 (300)
                      |++|+||+|++|++||++||+.| |++++++++++||||  |++|++.++|||+|||||||++.|  |++||||+|+|||
T Consensus         1 m~~~~if~g~~~~~La~~ia~~l-g~~l~~~~~~~F~dG--E~~v~i~esvrg~dV~iiqs~~~p~nd~lmeLl~~idA~   77 (326)
T 3s5j_B            1 MPNIKIFSGSSHQDLSQKIADRL-GLELGKVVTKKFSNQ--ETCVEIGESVRGEDVYIVQSGCGEINDNLMELLIMINAC   77 (326)
T ss_dssp             --CEEEEECSSCCHHHHHHHHHT-TCCCCCEEEEECTTS--CEEEEECSCCTTCEEEEECCCCSCHHHHHHHHHHHHHHH
T ss_pred             CCceEEEECCCCHHHHHHHHHHh-CCceeeeEEeECCCC--CEEEEECCCcCCCcEEEEecCCCCccHHHHHHHHHHHHH
Confidence            46799999999999999999999 799999999999999  699999999999999999999987  7899999999999


Q ss_pred             ccCCCceEEEEeccCCCccccccCCCCCcccHHHHHHHHhcCCCCCCCCCEEEEecCChhhhhcccCCCcccCCcccHHH
Q 022268          163 PKLFVSSFTLVLPFFPTGTSERMEDEGDVATAFTLARILSNIPTSRGGPTSLVTFDIHALQERFYFGDTILPCFESAIPL  242 (300)
Q Consensus       163 rragAk~ItlVIPYf~YARQDR~~~~Ge~isak~vA~lL~slp~~~aG~drVItvDlHs~qi~~fF~~~v~~l~L~a~~l  242 (300)
                      |++||++||+||||||||||||++++|||||+|++|+||+.     +|+|||||||+|++|+|+||++|+++  |++.|+
T Consensus        78 k~asA~rIt~ViPY~~YaRQDr~~~~repisak~vA~lL~~-----~G~drvit~DlH~~qiqgfF~ipvd~--l~a~p~  150 (326)
T 3s5j_B           78 KIASASRVTAVIPCFPYARQDKKDKSRAPISAKLVANMLSV-----AGADHIITMDLHASQIQGFFDIPVDN--LYAEPA  150 (326)
T ss_dssp             HHTTCSEEEEEESSCTTTTCCSCTTSSCCCHHHHHHHHHHH-----HTCSEEEEESCSSGGGGGGCSSCEEE--ECSHHH
T ss_pred             HhcCCcEEEEeccCccccccCCcCCCCCCEeHHHHHHHHHH-----cCCCEEEEEeCCChHHHhhcCCceec--eEcHHH
Confidence            99999999999999999999999999999999999999994     59999999999999999999999995  799999


Q ss_pred             HHHHHhcC-CCCCCeEEEeCCcccHHHHHHHHhhCCCccccccccccCCceeeeeec
Q 022268          243 LLNRLQQL-PDSDNISIAFPDDGAWKRFHKQLQHFPMVLRMPYVDLYCVHHAPAYKN  298 (300)
Q Consensus       243 L~~~l~~~-~~~~n~vIVSPD~GA~kRA~~~A~~l~~vv~~~~~~~lg~~~a~~~k~  298 (300)
                      |++|+++. .+.++++||+||.|+.+||+.+|            +.||+++++++|+
T Consensus       151 l~~~i~~~~~~~~~~vVVspd~Ggv~~A~~lA------------~~L~~~~~~i~K~  195 (326)
T 3s5j_B          151 VLKWIRENISEWRNCTIVSPDAGGAKRVTSIA------------DRLNVDFALIHKE  195 (326)
T ss_dssp             HHHHHHHHCTTGGGCEEEESSGGGHHHHHHHH------------HHHTCEEEEEEEC
T ss_pred             HHHHHHHhcCcCCCcEEEEECCCchHHHHHHH------------HHcCCCEEEEEEE
Confidence            99999864 23578999999999999999999            6666677777765
>3dah_A Ribose-phosphate pyrophosphokinase; pyrophosphoki seattle structural genomics center for infectious disease, magnesium, metal binding; HET: AMP; 2.30A {Burkholderia pseudomallei} Back     alignment and structure
>3lrt_A Ribose-phosphate pyrophosphokinase; phosphoribosyl transferase, ATP analog binding, ATP-binding, metal-binding, nucleotide biosynthesis; HET: ADP; 1.53A {Thermoplasma volcanium} PDB: 3lpn_A* 3nag_A* 3mbi_A* Back     alignment and structure
>1u9y_A RPPK;, ribose-phosphate pyrophosphokinase; PRPP synthase, transferase; 2.65A {Methanocaldococcus jannaschii} SCOP: c.61.1.2 c.61.1.2 PDB: 1u9z_A* Back     alignment and structure
>2ji4_A Phosphoribosyl pyrophosphate synthetase-associated protein 2; phosphorylation, nucleotide biosynthesis, transferase; 2.55A {Homo sapiens} PDB: 2c4k_A* Back     alignment and structure
>1dku_A Protein (phosphoribosyl pyrophosphate synthetase); open alpha-beta structure, domain duplication, phosphoribosyltransferase type I fold; HET: AP2 ABM; 2.20A {Bacillus subtilis} SCOP: c.61.1.2 c.61.1.2 PDB: 1dkr_A* 1ibs_A* Back     alignment and structure
>1dqn_A Guanine phosphoribosyltransferase; protein-inhibitor complex, Mg IONS, pyrophosphate, transition state analogue; HET: IMU; 1.75A {Giardia intestinalis} SCOP: c.61.1.1 PDB: 1dqp_A* Back     alignment and structure
>2aee_A OPRT, oprtase, orotate phosphoribosyltransferase; structural genomics, PSI, structure initiative; 1.95A {Streptococcus pyogenes} SCOP: c.61.1.1 Back     alignment and structure
>3s5j_B Ribose-phosphate pyrophosphokinase 1; nucleotide synthesis, transferase; 2.02A {Homo sapiens} PDB: 2hcr_A* 3efh_A 2h06_A 2h07_A 2h08_A Back     alignment and structure
>3dah_A Ribose-phosphate pyrophosphokinase; pyrophosphoki seattle structural genomics center for infectious disease, magnesium, metal binding; HET: AMP; 2.30A {Burkholderia pseudomallei} Back     alignment and structure
>3lrt_A Ribose-phosphate pyrophosphokinase; phosphoribosyl transferase, ATP analog binding, ATP-binding, metal-binding, nucleotide biosynthesis; HET: ADP; 1.53A {Thermoplasma volcanium} PDB: 3lpn_A* 3nag_A* 3mbi_A* Back     alignment and structure
>3dez_A OPRT, oprtase, orotate phosphoribosyltransferase; glycosyltransferase, MAGN pyrimidine biosynthesis; 2.40A {Streptococcus mutans} Back     alignment and structure
>1pzm_A HGPRT, hypoxanthine-guanine phosphoribosyltransferase; HET: 5GP; 2.10A {Leishmania tarentolae} SCOP: c.61.1.1 Back     alignment and structure
>1o5o_A Uracil phosphoribosyltransferase; TM0721, structural genomic PSI, protein structure initiative, joint center for structu genomics; HET: U5P; 2.30A {Thermotoga maritima} SCOP: c.61.1.1 Back     alignment and structure
>2yzk_A OPRT, oprtase, orotate phosphoribosyltransferase; rossmann fold, glycosyltransferase, magnesium, pyrimidine biosynthesis, structural genomics; 1.80A {Aeropyrum pernix} Back     alignment and structure
>1dku_A Protein (phosphoribosyl pyrophosphate synthetase); open alpha-beta structure, domain duplication, phosphoribosyltransferase type I fold; HET: AP2 ABM; 2.20A {Bacillus subtilis} SCOP: c.61.1.2 c.61.1.2 PDB: 1dkr_A* 1ibs_A* Back     alignment and structure
>2wns_A Orotate phosphoribosyltransferase; alternative splicing, multifunctional enzyme, lyase, polymorphism, decarboxylase, phosphoprotein; HET: OMP; 1.90A {Homo sapiens} Back     alignment and structure
>2ji4_A Phosphoribosyl pyrophosphate synthetase-associated protein 2; phosphorylation, nucleotide biosynthesis, transferase; 2.55A {Homo sapiens} PDB: 2c4k_A* Back     alignment and structure
>3hvu_A Hypoxanthine phosphoribosyltransferase; hypoxanthine-guanine phosphoribosyltransferase, 2-(N-morphol ethanesulfonic acid (MES), IDP01892; HET: MES; 1.95A {Bacillus anthracis str} PDB: 3h83_A* 3kb8_A* Back     alignment and structure
>2e55_A Uracil phosphoribosyltransferase; structural genomics; 2.15A {Aquifex aeolicus} Back     alignment and structure
>3o7m_A Hypoxanthine phosphoribosyltransferase; hypoxanthine-guanine phosphoribosyltransferase, salvage of nucleosides and nucleotides; HET: GOL; 1.98A {Bacillus anthracis} SCOP: c.61.1.0 Back     alignment and structure
>2geb_A Hypoxanthine-guanine phosphoribosyltransferase; HGPRT, mutant, inhibitor design, selectivity; 1.70A {Thermoanaerobacter tengcongensis} Back     alignment and structure
>2ehj_A Uracil phosphoribosyltransferase; structural genomics; 2.80A {Escherichia coli} Back     alignment and structure
>1wd5_A Hypothetical protein TT1426; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; HET: MES; 2.00A {Thermus thermophilus} SCOP: c.61.1.1 Back     alignment and structure
>3qw4_B UMP synthase; N-terminal orotidine monophosphate decarboxylase domain C-TE orotate phosphoribosyltransferase domain, transferase, LYAS; HET: U5P; 3.00A {Leishmania donovani} Back     alignment and structure
>3ohp_A Hypoxanthine phosphoribosyltransferase; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics; 2.04A {Vibrio cholerae} SCOP: c.61.1.1 PDB: 1g9s_A* 1g9t_A* 1grv_A 1j7j_A Back     alignment and structure
>1bd3_D Uprtase, uracil phosphoribosyltransferase; glycosyltransferase; 1.93A {Toxoplasma gondii} SCOP: c.61.1.1 PDB: 1bd4_D 1jlr_A* 1jls_B* 1upf_D 1upu_D* Back     alignment and structure
>1u9y_A RPPK;, ribose-phosphate pyrophosphokinase; PRPP synthase, transferase; 2.65A {Methanocaldococcus jannaschii} SCOP: c.61.1.2 c.61.1.2 PDB: 1u9z_A* Back     alignment and structure
>1hgx_A HGXPRTASE, hypoxanthine-guanine-xanthine phosphoribosyltransferase; glycosyltransferase, purine salvage, transferase (glycosyltransferase); HET: 5GP; 1.90A {Tritrichomonas foetus} SCOP: c.61.1.1 Back     alignment and structure
>1v9s_A Uracil phosphoribosyltransferase; pyrimidine salvage, oligomerization, structural genomics, RI structural genomics/proteomics initiative; 2.10A {Thermus thermophilus} SCOP: c.61.1.1 Back     alignment and structure
>1yfz_A Hypoxanthine-guanine phosphoribosyltransferase; protein-nucleotide complex; HET: IMP; 2.20A {Thermoanaerobacter tengcongensis} SCOP: c.61.1.1 PDB: 1r3u_A* Back     alignment and structure
>1ecf_A Glutamine phosphoribosylpyrophosphate amidotransf; purine biosynthesis, transferase, glycosyltransferase, gluta amidotransferase; HET: PIN; 2.00A {Escherichia coli} SCOP: c.61.1.1 d.153.1.1 PDB: 1ecb_A* 1ecc_A* 1ecg_A* 1ecj_A* Back     alignment and structure
>1ao0_A Glutamine phosphoribosylpyrophosphate amidotransferase; glutamine amidotransferase, prtase, purine biosynthesis, phosphoribosyltransferase; HET: 5GP ADP; 2.80A {Bacillus subtilis} SCOP: c.61.1.1 d.153.1.1 PDB: 1gph_1* Back     alignment and structure
>1vdm_A Purine phosphoribosyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Pyrococcus horikoshii} SCOP: c.61.1.1 Back     alignment and structure
>1tc1_A Protein (hypoxanthine phosphoribosyltransferase); transferase,phosphoribosyltransferase, purine salvage, nucleotide metabolism; HET: FMB MES; 1.41A {Trypanosoma cruzi} SCOP: c.61.1.1 PDB: 1tc2_A* 1p19_A* 1p18_A* 1p17_A* 1i0l_A* 1i14_A* 1i0i_A* 1i13_A* Back     alignment and structure
>3m3h_A OPRT, oprtase, orotate phosphoribosyltransferase; pyrimidine ribonucleotide biosynthesis, structural genomics, infectious diseases; 1.75A {Bacillus anthracis} PDB: 3osc_A* Back     alignment and structure
>1o57_A PUR operon repressor; purine operon repressor, helix-turn-helix domain, phosphoribosyltranseferases, domain recombination, DNA binding; HET: EPE P6G 2PE PG4 1PE; 2.20A {Bacillus subtilis} SCOP: a.4.5.40 c.61.1.1 PDB: 1p4a_A* Back     alignment and structure
>1pzm_A HGPRT, hypoxanthine-guanine phosphoribosyltransferase; HET: 5GP; 2.10A {Leishmania tarentolae} SCOP: c.61.1.1 Back     alignment and structure
>1zn8_A APRT, adenine phosphoribosyltransferase; glycosyltransferase, purine salvage; HET: AMP; 1.76A {Homo sapiens} SCOP: c.61.1.1 PDB: 1ore_A* 1zn7_A* 1zn9_A* Back     alignment and structure
>1i5e_A Uracil phosphoribosyltransferase; salvage pathway; HET: U5P; 3.00A {Bacillus caldolyticus} SCOP: c.61.1.1 Back     alignment and structure
>2aee_A OPRT, oprtase, orotate phosphoribosyltransferase; structural genomics, PSI, structure initiative; 1.95A {Streptococcus pyogenes} SCOP: c.61.1.1 Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 300
d1dkua1159 c.61.1.2 (A:8-166) Phosphoribosylpyrophosphate syn 1e-15
d1u9ya1155 c.61.1.2 (A:1-155) Phosphoribosylpyrophosphate syn 1e-13
d2c4ka1160 c.61.1.2 (A:7-166) PRPP synthetase-associated prot 1e-12
>d1dkua1 c.61.1.2 (A:8-166) Phosphoribosylpyrophosphate synthetase {Bacillus subtilis [TaxId: 1423]} Length = 159 Back     information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: PRTase-like
superfamily: PRTase-like
family: Phosphoribosylpyrophosphate synthetase-like
domain: Phosphoribosylpyrophosphate synthetase
species: Bacillus subtilis [TaxId: 1423]

 Score = 70.8 bits (173), Expect = 1e-15
 Identities = 37/163 (22%), Positives = 65/163 (39%), Gaps = 12/163 (7%)

Query: 90  LFYCPETHSLAERVAAQSDAIELRSINWRKFKDGFPNLFIPNAHGIRGQHVAFLASFSSP 149
           +F       LA+ +A     ++L   +  +F DG   + I     IRG     + S S P
Sbjct: 4   IFSLNSNPELAKEIADIVG-VQLGKCSVTRFSDGEVQINIE--ESIRGCDCYIIQSTSDP 60

Query: 150 G--KIFEQLSVIYALPKLFVSSFTLVLPFFPTGTSERMEDEGDVATAFTLARILSNIPTS 207
               I E L ++ AL +    +  +V+P++     +R     +  TA   A +L      
Sbjct: 61  VNEHIMELLIMVDALKRASAKTINIVIPYYGYARQDRKARSREPITAKLFANLL-----E 115

Query: 208 RGGPTSLVTFDIHALQERFYFGDTILPCFESAIPLLLNRLQQL 250
             G T ++  D+HA Q + +F   I       +P+L    +  
Sbjct: 116 TAGATRVIALDLHAPQIQGFFDIPID--HLMGVPILGEYFEGK 156
>d1u9ya1 c.61.1.2 (A:1-155) Phosphoribosylpyrophosphate synthetase {Methanocaldococcus jannaschii [TaxId: 2190]} Length = 155 Back     information, alignment and structure
>d2c4ka1 c.61.1.2 (A:7-166) PRPP synthetase-associated protein 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 160 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query300
d1dkua1159 Phosphoribosylpyrophosphate synthetase {Bacillus s 100.0
d1u9ya1155 Phosphoribosylpyrophosphate synthetase {Methanocal 100.0
d2c4ka1160 PRPP synthetase-associated protein 1 {Human (Homo 100.0
d1dkua2149 Phosphoribosylpyrophosphate synthetase {Bacillus s 97.52
d1u9ya2129 Phosphoribosylpyrophosphate synthetase {Methanocal 97.41
d2c4ka2184 PRPP synthetase-associated protein 1 {Human (Homo 96.71
d1u9ya2129 Phosphoribosylpyrophosphate synthetase {Methanocal 96.29
d1wd5a_208 Putative phosphoribosyltransferase TT1426 (TTHA146 83.44
d1vcha1174 Putative phosphoribosyltransferase TTHA1613 {Therm 81.54
d1tc1a_184 Hypoxanthine PRTase {Trypanosoma cruzi [TaxId: 569 81.36
d1vdma1153 Pprobable purine phosphoribosyltransferase PH0095 80.23
>d1dkua1 c.61.1.2 (A:8-166) Phosphoribosylpyrophosphate synthetase {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: PRTase-like
superfamily: PRTase-like
family: Phosphoribosylpyrophosphate synthetase-like
domain: Phosphoribosylpyrophosphate synthetase
species: Bacillus subtilis [TaxId: 1423]

Probab=100.00  E-value=5.2e-52  Score=358.13  Aligned_cols=154  Identities=24%  Similarity=0.374  Sum_probs=148.1

Q ss_pred             cEEEEeCCCCHHHHHHHHHHhCCCceeeeEEeeeCCCCeeEEeecCCCCCCCeEEEEeecCCc--hhHHHHHHHHHhccc
Q 022268           87 KVCLFYCPETHSLAERVAAQSDAIELRSINWRKFKDGFPNLFIPNAHGIRGQHVAFLASFSSP--GKIFEQLSVIYALPK  164 (300)
Q Consensus        87 ~~~Ifsgsss~~LA~~IA~~L~gi~l~~i~~~rFpDGE~Ei~V~i~esVrG~dV~IIqS~~~p--d~lmELLllidAlrr  164 (300)
                      +|+||+|+++++||++||+.| |++++++++++||||  |++++++++|||+|||||||+++|  |++||||++++|||+
T Consensus         1 nm~i~~gss~~~La~~ia~~L-g~~l~~~~~~~FpDG--E~~v~i~~~vrg~dv~ivqs~~~~~nd~lmelll~~~a~k~   77 (159)
T d1dkua1           1 NLKIFSLNSNPELAKEIADIV-GVQLGKCSVTRFSDG--EVQINIEESIRGCDCYIIQSTSDPVNEHIMELLIMVDALKR   77 (159)
T ss_dssp             CEEEEECSSCHHHHHHHHHHH-TCCCCCEEEEECTTS--CEEEEECSCCTTCEEEEECCCCSSHHHHHHHHHHHHHHHHH
T ss_pred             CeEEEeCCCCHHHHHHHHHHh-CCCccceEEEEcCCC--CEEEEeecCCCCCceEEEecCCCCcHHHHHHHHHHHHHHHH
Confidence            599999999999999999999 799999999999999  699999999999999999999876  789999999999999


Q ss_pred             CCCceEEEEeccCCCccccccCCCCCcccHHHHHHHHhcCCCCCCCCCEEEEecCChhhhhcccCCCcccCCcccHHHHH
Q 022268          165 LFVSSFTLVLPFFPTGTSERMEDEGDVATAFTLARILSNIPTSRGGPTSLVTFDIHALQERFYFGDTILPCFESAIPLLL  244 (300)
Q Consensus       165 agAk~ItlVIPYf~YARQDR~~~~Ge~isak~vA~lL~slp~~~aG~drVItvDlHs~qi~~fF~~~v~~l~L~a~~lL~  244 (300)
                      +||++||+|+|||||+||||++++|||+|+|++|+||++     +|+|+|||+|+|++|+++||++|+++  |++.+.|+
T Consensus        78 ~~A~~i~~ViPY~~YsRQDr~~~~ge~isak~vA~lL~~-----~G~d~vitvDlH~~~i~~fF~ip~~n--l~a~~~~~  150 (159)
T d1dkua1          78 ASAKTINIVIPYYGYARQDRKARSREPITAKLFANLLET-----AGATRVIALDLHAPQIQGFFDIPIDH--LMGVPILG  150 (159)
T ss_dssp             TTCSEEEEEESSCTTTTCCSCSSTTCCCHHHHHHHHHHH-----HTCCEEEEESCSSGGGGGGCSSCEEE--ECSHHHHH
T ss_pred             cCCcceEEeecccchhhhccccCCCCceeHHHHhhhHhh-----cCCceeEEecCCcHHHcCCCCCceec--ccchHHHH
Confidence            999999999999999999999999999999999999994     59999999999999999999999995  79999999


Q ss_pred             HHHhcC
Q 022268          245 NRLQQL  250 (300)
Q Consensus       245 ~~l~~~  250 (300)
                      +||+++
T Consensus       151 ~~i~~~  156 (159)
T d1dkua1         151 EYFEGK  156 (159)
T ss_dssp             HHHHTT
T ss_pred             HHHHHc
Confidence            999864
>d1u9ya1 c.61.1.2 (A:1-155) Phosphoribosylpyrophosphate synthetase {Methanocaldococcus jannaschii [TaxId: 2190]} Back     information, alignment and structure
>d2c4ka1 c.61.1.2 (A:7-166) PRPP synthetase-associated protein 1 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1dkua2 c.61.1.2 (A:167-315) Phosphoribosylpyrophosphate synthetase {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1u9ya2 c.61.1.2 (A:156-284) Phosphoribosylpyrophosphate synthetase {Methanocaldococcus jannaschii [TaxId: 2190]} Back     information, alignment and structure
>d2c4ka2 c.61.1.2 (A:167-350) PRPP synthetase-associated protein 1 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1u9ya2 c.61.1.2 (A:156-284) Phosphoribosylpyrophosphate synthetase {Methanocaldococcus jannaschii [TaxId: 2190]} Back     information, alignment and structure
>d1wd5a_ c.61.1.1 (A:) Putative phosphoribosyltransferase TT1426 (TTHA1462) {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1vcha1 c.61.1.1 (A:2-175) Putative phosphoribosyltransferase TTHA1613 {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1tc1a_ c.61.1.1 (A:) Hypoxanthine PRTase {Trypanosoma cruzi [TaxId: 5693]} Back     information, alignment and structure
>d1vdma1 c.61.1.1 (A:1-153) Pprobable purine phosphoribosyltransferase PH0095 {Pyrococcus horikoshii [TaxId: 53953]} Back     information, alignment and structure