Citrus Sinensis ID: 022341

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------30
MDLLLLEKTLLALFAAVVVAITVSKLRGKRFKLPPGPLPVPVFGNWLQVGDDLNHRNLSDLAKKYGDVLLLRMGQRNLVVVSSPDHAKEVLHTQGVEFGSRTRNVVFDIFTGKGQDMVFTVYGEHWRKMRRIMTVPFFTNKVVQQQRFNWEDEAARVVEDVKKDPEAATNGIVLRRRLQLMMYNNMYRIMFDRRFESQDDPLFNRLKALNGERSRLAQSFEYNYGDFIPILRPFLRGYLKICKEVKERRLQLFKDYFVEERNLKCAIDHILDAQTKGEINEDNVLYIVENINVAGMFI
cccHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccHHHHHHHHHHcccEEEEcccccEEEEccHHHHHHHHHHccccccccccHHHHHHHHcccccEEEccccHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHcccccccccEEHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHccccccccccccHHHcccHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHcccccccccHHHHHHHHHHHHccccc
ccHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccEcccEcHHHcccccHHHHHHHHHHHHccEEEEEEccEEEEEEccHHHHHHHHccccccccEEccHHHHcHHccccccEEEccccHHHHHHHHEEEEHHHcccHHHcHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHccc
MDLLLLEKTLLALFAAVVVAITVSklrgkrfklppgplpvpvfgnwlqvgddlnhrNLSDLAKKYGDVLLLRMGqrnlvvvsspdhaKEVLHTqgvefgsrtrNVVFDIFTGKGQDMVFTVYGEHWRKMRRIMTVPFFTNKVVQQQRFNWEDEAARVVEDvkkdpeaatnGIVLRRRLQLMMYNNMYRIMFdrrfesqddplfNRLKALNGERSRLAQSfeynygdfipilrPFLRGYLKICKEVKERRLQLFKDYFVEERNLKCAIDHILdaqtkgeinednVLYIVENINVAGMFI
MDLLLLEKTLLALFAAVVVAITVSklrgkrfklppgplpvpVFGNWLQVGDDLNHRNLSDLAKKYGDVLLLRMGQRNLVVVSSPDHAKEVLhtqgvefgsrtrNVVFDiftgkgqdMVFTVYGEHWRKMRRIMTVPFFTNKVVQQQRFNWEDEAARVvedvkkdpeaatngivlrrrlQLMMYNNMYRIMFDRRFESQDDPLFNRLKALNGERSRLAQSFEYNYGDFIPILRPFLRGYLKICKEVKERRLQLFKDYFVEERNLKCAIDHILDaqtkgeinednvLYIVENINVAGMFI
MDllllektllalfaavvvaITVSKLRGKRfklppgplpvpvfgNWLQVGDDLNHRNLSDLAKKYGDVLLLRMGQRNLVVVSSPDHAKEVLHTQGVEFGSRTRNVVFDIFTGKGQDMVFTVYGEHWRKMRRIMTVPFFTNKVVQQQRFNWEDEAARVVEDVKKDPEAATNGIVLRRRLQLMMYNNMYRIMFDRRFESQDDPLFNRLKALNGERSRLAQSFEYNYGDFIPILRPFLRGYLKICKEVKERRLQLFKDYFVEERNLKCAIDHILDAQTKGEINEDNVLYIVENINVAGMFI
**LLLLEKTLLALFAAVVVAITVSKLRGKRFKLPPGPLPVPVFGNWLQVGDDLNHRNLSDLAKKYGDVLLLRMGQRNLVVVSSPDHAKEVLHTQGVEFGSRTRNVVFDIFTGKGQDMVFTVYGEHWRKMRRIMTVPFFTNKVVQQQRFNWEDEAARVVEDVKKDPEAATNGIVLRRRLQLMMYNNMYRIMFDRRFESQDDPLFNRLKALNGERSRLAQSFEYNYGDFIPILRPFLRGYLKICKEVKERRLQLFKDYFVEERNLKCAIDHILDAQTKGEINEDNVLYIVENINVAGM**
*DLLLLEKTLLALFAAVVVAITV**************LPVPVFGNWLQVGDDLNHRNLSDLAKKYGDVLLLRMGQRNLVVVSSPDHAKEVLHTQGVEFGSRTRNVVFDIFTGKGQDMVFTVYGEHWRKMRRIMTVPFFTNKVVQQQRFNWEDEAARVVEDVK*********IVLRRRLQLMMYNNMYRIMFDRRFESQDDPLFNRLKALNGERSRLAQSFEYNYGDFIPILRPFLRGYLKICKEVKERRLQLFKDYFVEERNLKCAIDHILDAQTKGEINEDNVLYIVENINVAGMFI
MDLLLLEKTLLALFAAVVVAITVSKLRGKRFKLPPGPLPVPVFGNWLQVGDDLNHRNLSDLAKKYGDVLLLRMGQRNLVVVSSPDHAKEVLHTQGVEFGSRTRNVVFDIFTGKGQDMVFTVYGEHWRKMRRIMTVPFFTNKVVQQQRFNWEDEAARVVEDVKKDPEAATNGIVLRRRLQLMMYNNMYRIMFDRRFESQDDPLFNRLKALNGERSRLAQSFEYNYGDFIPILRPFLRGYLKICKEVKERRLQLFKDYFVEERNLKCAIDHILDAQTKGEINEDNVLYIVENINVAGMFI
*DLLLLEKTLLALFAAVVVAITVSKLRGKRFKLPPGPLPVPVFGNWLQVGDDLNHRNLSDLAKKYGDVLLLRMGQRNLVVVSSPDHAKEVLHTQGVEFGSRTRNVVFDIFTGKGQDMVFTVYGEHWRKMRRIMTVPFFTNKVVQQQRFNWEDEAARVVEDVKKDPEAATNGIVLRRRLQLMMYNNMYRIMFDRRFESQDDPLFNRLKALNGERSRLAQSFEYNYGDFIPILRPFLRGYLKICKEVKERRLQLFKDYFVEERNLKCAIDHILDAQTKGEINEDNVLYIVENINVAGMFI
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
SSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MDLLLLEKTLLALFAAVVVAITVSKLRGKRFKLPPGPLPVPVFGNWLQVGDDLNHRNLSDLAKKYGDVLLLRMGQRNLVVVSSPDHAKEVLHTQGVEFGSRTRNVVFDIFTGKGQDMVFTVYGEHWRKMRRIMTVPFFTNKVVQQQRFNWEDEAARVVEDVKKDPEAATNGIVLRRRLQLMMYNNMYRIMFDRRFESQDDPLFNRLKALNGERSRLAQSFEYNYGDFIPILRPFLRGYLKICKEVKERRLQLFKDYFVEERNLKCAIDHILDAQTKGEINEDNVLYIVENINVAGMFI
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query298 2.2.26 [Sep-21-2011]
Q42797 506 Trans-cinnamate 4-monooxy yes no 0.993 0.584 0.831 1e-150
Q43240 505 Trans-cinnamate 4-monooxy N/A no 0.993 0.586 0.821 1e-149
Q04468 505 Trans-cinnamate 4-monooxy N/A no 0.993 0.586 0.821 1e-149
P48522 505 Trans-cinnamate 4-monooxy N/A no 0.993 0.586 0.860 1e-149
Q43033 506 Trans-cinnamate 4-monooxy N/A no 0.993 0.584 0.811 1e-147
P37115 505 Trans-cinnamate 4-monooxy N/A no 0.993 0.586 0.837 1e-144
Q9AR74 506 Trans-cinnamate 4-monooxy N/A no 0.993 0.584 0.866 1e-143
Q43054 505 Trans-cinnamate 4-monooxy N/A no 0.993 0.586 0.876 1e-143
Q96423 505 Trans-cinnamate 4-monooxy N/A no 0.993 0.586 0.834 1e-142
O24312 505 Trans-cinnamate 4-monooxy N/A no 0.993 0.586 0.863 1e-140
>sp|Q42797|TCMO_SOYBN Trans-cinnamate 4-monooxygenase OS=Glycine max GN=CYP73A11 PE=2 SV=1 Back     alignment and function desciption
 Score =  532 bits (1370), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 257/309 (83%), Positives = 277/309 (89%), Gaps = 13/309 (4%)

Query: 1   MDLLLLEKTLLALFAAVVVAITVSKLRGKRFKLPPGPLPVPVFGNWLQVGDDLNHRNLSD 60
           MDLLLLEKTL+ LF A VVAI VS LRG++FKLPPGPLPVP+FGNWLQVGDDLNHRNL+D
Sbjct: 1   MDLLLLEKTLIGLFLAAVVAIAVSTLRGRKFKLPPGPLPVPIFGNWLQVGDDLNHRNLTD 60

Query: 61  LAKKYGDVLLLRMGQRNLVVVSSPDHAKEVLHTQGVEFGSRTRNVVFDIFTGKGQDMVFT 120
           LAKK+GD+ LLRMGQRNLVVVSSP+ AKEVLHTQGVEFGSRTRNVVFDIFTGKGQDMVFT
Sbjct: 61  LAKKFGDIFLLRMGQRNLVVVSSPELAKEVLHTQGVEFGSRTRNVVFDIFTGKGQDMVFT 120

Query: 121 VYGEHWRKMRRIMTVPFFTNKVVQQQRFNWEDEAARVVEDVKKDPEAATNGIVLRRRLQL 180
           VYGEHWRKMRRIMTVPFFTNKVVQQ R  WE EAA VVEDVKK+P+AA +G V+RRRLQL
Sbjct: 121 VYGEHWRKMRRIMTVPFFTNKVVQQYRHGWESEAAAVVEDVKKNPDAAVSGTVIRRRLQL 180

Query: 181 MMYNNMYRIMFDRRFESQDDPLFNRLKALNGERSRLAQSFEYNYGDFIPILRPFLRGYLK 240
           MMYNNMYRIMFDRRFES++DP+F RL+ALNGERSRLAQSFEYNYGDFIPILRPFL+GYLK
Sbjct: 181 MMYNNMYRIMFDRRFESEEDPIFQRLRALNGERSRLAQSFEYNYGDFIPILRPFLKGYLK 240

Query: 241 ICKEVKERRLQLFKDYFVEERN-------------LKCAIDHILDAQTKGEINEDNVLYI 287
           ICKEVKE RL+LFKDYFV+ER              LKCAIDHILDAQ KGEINEDNVLYI
Sbjct: 241 ICKEVKETRLKLFKDYFVDERKKLGSTKSTNNNNELKCAIDHILDAQRKGEINEDNVLYI 300

Query: 288 VENINVAGM 296
           VENINVA +
Sbjct: 301 VENINVAAI 309
Controls carbon flux to pigments essential for pollination or UV protection, to numerous pytoalexins synthesized by plants when challenged by pathogens, and to lignins.
Glycine max (taxid: 3847)
EC: 1EC: .EC: 1EC: 4EC: .EC: 1EC: 3EC: .EC: 1EC: 1
>sp|Q43240|TCMO_ZINEL Trans-cinnamate 4-monooxygenase OS=Zinnia elegans GN=CYP73A12 PE=2 SV=1 Back     alignment and function description
>sp|Q04468|TCMO_HELTU Trans-cinnamate 4-monooxygenase OS=Helianthus tuberosus GN=CYP73A1 PE=1 SV=1 Back     alignment and function description
>sp|P48522|TCMO_CATRO Trans-cinnamate 4-monooxygenase OS=Catharanthus roseus GN=CYP73A4 PE=2 SV=1 Back     alignment and function description
>sp|Q43033|TCMO_PETCR Trans-cinnamate 4-monooxygenase OS=Petroselinum crispum GN=CYP73A10 PE=2 SV=1 Back     alignment and function description
>sp|P37115|TCMO_VIGRR Trans-cinnamate 4-monooxygenase OS=Vigna radiata var. radiata GN=CYP73A2 PE=1 SV=1 Back     alignment and function description
>sp|Q9AR74|TCMO_RUTGR Trans-cinnamate 4-monooxygenase OS=Ruta graveolens GN=CYP73A2 PE=2 SV=1 Back     alignment and function description
>sp|Q43054|TCMO_POPKI Trans-cinnamate 4-monooxygenase OS=Populus kitakamiensis GN=CYP73A16 PE=2 SV=1 Back     alignment and function description
>sp|Q96423|TCMO_GLYEC Trans-cinnamate 4-monooxygenase OS=Glycyrrhiza echinata GN=CYP73A14 PE=2 SV=1 Back     alignment and function description
>sp|O24312|TCMO_POPTM Trans-cinnamate 4-monooxygenase OS=Populus tremuloides GN=CYP73A13 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query298
161597779 504 cinnamate-4-hydroxylase [Rubus coreanus] 0.993 0.587 0.860 1e-154
237682385 505 cinnamate-4-hydroxylase [Canarium album] 0.993 0.586 0.866 1e-153
221328921 504 cinnamate-4-hydroxylase [Rubus occidenta 0.993 0.587 0.857 1e-153
161597783 504 cinnamate-4-hydroxylase [Rubus sp. SSL-2 0.993 0.587 0.857 1e-153
14210375 505 cinnamate 4-hydroxylase [Citrus x paradi 0.993 0.586 0.951 1e-152
223006835 505 cinnamic acid 4-hydroxylase [Humulus lup 0.993 0.586 0.840 1e-151
193506912 505 candidate cinnamic acid 4-hydroxylase [C 0.993 0.586 0.847 1e-150
9965899 505 cinnamate-4-hydroxylase [Gossypium arbor 0.993 0.586 0.844 1e-150
341833962 504 cinnamic acid 4-hydroxylase-like protein 0.993 0.587 0.834 1e-150
323149965 506 cinnamate-4-hydroxylase 1 [Petunia x hyb 0.993 0.584 0.834 1e-149
>gi|161597779|gb|ABX74779.1| cinnamate-4-hydroxylase [Rubus coreanus] Back     alignment and taxonomy information
 Score =  548 bits (1413), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 265/308 (86%), Positives = 282/308 (91%), Gaps = 12/308 (3%)

Query: 1   MDLLLLEKTLLALFAAVVVAITVSKLRGKRFKLPPGPLPVPVFGNWLQVGDDLNHRNLSD 60
           MDLLL+EKTLL LFAAVVVAITVSKLRGK+FKLPPGP+PVPVFGNWLQVGDDLNHRNL+D
Sbjct: 1   MDLLLMEKTLLGLFAAVVVAITVSKLRGKKFKLPPGPIPVPVFGNWLQVGDDLNHRNLTD 60

Query: 61  LAKKYGDVLLLRMGQRNLVVVSSPDHAKEVLHTQGVEFGSRTRNVVFDIFTGKGQDMVFT 120
           +AKK+G+V +LRMGQRNLVVVSSPD AKEVLHTQGVEFGSRTRNVVFDIFTGKGQDMVFT
Sbjct: 61  MAKKFGEVFMLRMGQRNLVVVSSPDLAKEVLHTQGVEFGSRTRNVVFDIFTGKGQDMVFT 120

Query: 121 VYGEHWRKMRRIMTVPFFTNKVVQQQRFNWEDEAARVVEDVKKDPEAATNGIVLRRRLQL 180
           VYGEHWRKMRRIMTVPFFTNKVVQQ R+ WE EAA VVEDVKK PEAATNG+VLRRRLQL
Sbjct: 121 VYGEHWRKMRRIMTVPFFTNKVVQQYRYGWESEAAAVVEDVKKHPEAATNGMVLRRRLQL 180

Query: 181 MMYNNMYRIMFDRRFESQDDPLFNRLKALNGERSRLAQSFEYNYGDFIPILRPFLRGYLK 240
           MMYNNMYRIMFDRRFES+DDPLF +LK LNGERSRLAQSFEYNYGDFIP+LRPFLRGYL 
Sbjct: 181 MMYNNMYRIMFDRRFESEDDPLFVKLKGLNGERSRLAQSFEYNYGDFIPVLRPFLRGYLN 240

Query: 241 ICKEVKERRLQLFKDYFVEER------------NLKCAIDHILDAQTKGEINEDNVLYIV 288
           ICKEVKE+R+QLFKDYFV+ER             LKCAIDHILDAQ KGEINEDNVLYIV
Sbjct: 241 ICKEVKEKRIQLFKDYFVDERKKLSSTQATTNEGLKCAIDHILDAQQKGEINEDNVLYIV 300

Query: 289 ENINVAGM 296
           ENINVA +
Sbjct: 301 ENINVAAI 308

Source: Rubus coreanus

Species: Rubus coreanus

Genus: Rubus

Family: Rosaceae

Order: Rosales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|237682385|gb|ACR10242.1| cinnamate-4-hydroxylase [Canarium album] Back     alignment and taxonomy information
>gi|221328921|gb|ACM17896.1| cinnamate-4-hydroxylase [Rubus occidentalis] Back     alignment and taxonomy information
>gi|161597783|gb|ABX74781.1| cinnamate-4-hydroxylase [Rubus sp. SSL-2007] Back     alignment and taxonomy information
>gi|14210375|gb|AAK57011.1|AF378333_1 cinnamate 4-hydroxylase [Citrus x paradisi] Back     alignment and taxonomy information
>gi|223006835|gb|ACM69364.1| cinnamic acid 4-hydroxylase [Humulus lupulus] Back     alignment and taxonomy information
>gi|193506912|gb|ACF19421.1| candidate cinnamic acid 4-hydroxylase [Capsicum annuum] Back     alignment and taxonomy information
>gi|9965899|gb|AAG10197.1| cinnamate-4-hydroxylase [Gossypium arboreum] gi|268528125|gb|ACZ06239.1| cinnamate 4-hydroxylase [Gossypium hirsutum] Back     alignment and taxonomy information
>gi|341833962|gb|AEK94316.1| cinnamic acid 4-hydroxylase-like protein [Pyrus x bretschneideri] Back     alignment and taxonomy information
>gi|323149965|gb|ADX33332.1| cinnamate-4-hydroxylase 1 [Petunia x hybrida] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query298
TAIR|locus:2064402 505 C4H "cinnamate-4-hydroxylase" 0.919 0.542 0.783 2.8e-114
TAIR|locus:2058440 508 CYP98A3 "cytochrome P450, fami 0.778 0.456 0.308 3.2e-19
TAIR|locus:2132614 526 CYP706A2 ""cytochrome P450, fa 0.755 0.427 0.281 3.3e-18
TAIR|locus:2122194 520 FAH1 "ferulic acid 5-hydroxyla 0.583 0.334 0.324 5.4e-18
UNIPROTKB|Q947B7 493 Q947B7 "(+)-menthofuran syntha 0.560 0.338 0.324 6e-18
TAIR|locus:2132594 557 CYP706A1 ""cytochrome P450, fa 0.755 0.403 0.277 8e-18
TAIR|locus:504955639 489 CYP71A26 ""cytochrome P450, fa 0.865 0.527 0.268 1.6e-17
TAIR|locus:504955640 490 CYP71A22 ""cytochrome P450, fa 0.624 0.379 0.286 7.2e-17
TAIR|locus:504955642 490 CYP71A21 ""cytochrome P450, fa 0.617 0.375 0.294 9.3e-17
TAIR|locus:2142075 497 CYP71A20 ""cytochrome P450, fa 0.674 0.404 0.282 1.2e-16
TAIR|locus:2064402 C4H "cinnamate-4-hydroxylase" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1127 (401.8 bits), Expect = 2.8e-114, P = 2.8e-114
 Identities = 224/286 (78%), Positives = 242/286 (84%)

Query:    23 VSKLRGKRXXXXXXXXXXXXXXNWLQVGDDLNHRNLSDLAKKYGDVLLLRMGQRNLVVVS 82
             +SKLRGK+              NWLQVGDDLNHRNL D AKK+GD+ LLRMGQRNLVVVS
Sbjct:    23 ISKLRGKKLKLPPGPIPIPIFGNWLQVGDDLNHRNLVDYAKKFGDLFLLRMGQRNLVVVS 82

Query:    83 SPDHAKEVLHTQGVEFGSRTRNVVFDIFTGKGQDMVFTVYGEHWRKMRRIMTVPFFTNKV 142
             SPD  KEVL TQGVEFGSRTRNVVFDIFTGKGQDMVFTVYGEHWRKMRRIMTVPFFTNKV
Sbjct:    83 SPDLTKEVLLTQGVEFGSRTRNVVFDIFTGKGQDMVFTVYGEHWRKMRRIMTVPFFTNKV 142

Query:   143 VQQQRFNWEDEAARVVEDVKKDPEAATNGIVLRRRLQLMMYNNMYRIMFDRRFESQDDPL 202
             VQQ R  WE EAA VVEDVKK+P++AT GIVLR+RLQLMMYNNM+RIMFDRRFES+DDPL
Sbjct:   143 VQQNREGWEFEAASVVEDVKKNPDSATKGIVLRKRLQLMMYNNMFRIMFDRRFESEDDPL 202

Query:   203 FNRLKALNGERSRLAQSFEYNYGDFIPILRPFLRGYLKICKEVKERRLQLFKDYFVEERN 262
             F RLKALNGERSRLAQSFEYNYGDFIPILRPFLRGYLKIC++VK+RR+ LFK YFV+ER 
Sbjct:   203 FLRLKALNGERSRLAQSFEYNYGDFIPILRPFLRGYLKICQDVKDRRIALFKKYFVDERK 262

Query:   263 ------------LKCAIDHILDAQTKGEINEDNVLYIVENINVAGM 296
                         LKCAIDHIL+A+ KGEINEDNVLYIVENINVA +
Sbjct:   263 QIASSKPTGSEGLKCAIDHILEAEQKGEINEDNVLYIVENINVAAI 308
GO:0005576 "extracellular region" evidence=ISM
GO:0055114 "oxidation-reduction process" evidence=IEA
GO:0009505 "plant-type cell wall" evidence=IDA
GO:0005783 "endoplasmic reticulum" evidence=IDA;TAS
GO:0005774 "vacuolar membrane" evidence=IDA
GO:0005886 "plasma membrane" evidence=IDA
GO:0016020 "membrane" evidence=IDA
GO:0009555 "pollen development" evidence=IMP
GO:0009698 "phenylpropanoid metabolic process" evidence=IMP
GO:0009808 "lignin metabolic process" evidence=IMP
GO:0032502 "developmental process" evidence=IMP
GO:0040007 "growth" evidence=IMP
GO:0080167 "response to karrikin" evidence=IEP
GO:0009506 "plasmodesma" evidence=IDA
GO:0005794 "Golgi apparatus" evidence=IDA
GO:0009611 "response to wounding" evidence=IMP;RCA
GO:0009805 "coumarin biosynthetic process" evidence=RCA
GO:0009963 "positive regulation of flavonoid biosynthetic process" evidence=RCA
GO:0005515 "protein binding" evidence=IPI
GO:0042802 "identical protein binding" evidence=IPI
GO:0009416 "response to light stimulus" evidence=IEP
GO:0009699 "phenylpropanoid biosynthetic process" evidence=TAS
GO:0016710 "trans-cinnamate 4-monooxygenase activity" evidence=IDA
TAIR|locus:2058440 CYP98A3 "cytochrome P450, family 98, subfamily A, polypeptide 3" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2132614 CYP706A2 ""cytochrome P450, family 706, subfamily A, polypeptide 2"" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2122194 FAH1 "ferulic acid 5-hydroxylase 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
UNIPROTKB|Q947B7 Q947B7 "(+)-menthofuran synthase" [Mentha x piperita (taxid:34256)] Back     alignment and assigned GO terms
TAIR|locus:2132594 CYP706A1 ""cytochrome P450, family 706, subfamily A, polypeptide 1"" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:504955639 CYP71A26 ""cytochrome P450, family 71, subfamily A, polypeptide 26"" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:504955640 CYP71A22 ""cytochrome P450, family 71, subfamily A, polypeptide 22"" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:504955642 CYP71A21 ""cytochrome P450, family 71, subfamily A, polypeptide 21"" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2142075 CYP71A20 ""cytochrome P450, family 71, subfamily A, polypeptide 20"" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q42797TCMO_SOYBN1, ., 1, 4, ., 1, 3, ., 1, 10.83170.99320.5849yesno
P92994TCMO_ARATH1, ., 1, 4, ., 1, 3, ., 1, 10.80510.99320.5861yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer1.14.13LOW CONFIDENCE prediction!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
C4H2
SubName- Full=Putative uncharacterized protein; (505 aa)
(Populus trichocarpa)
Predicted Functional Partners:
PAL
RecName- Full=Phenylalanine ammonia-lyase; EC=4.3.1.24;; This is a key enzyme of plant metaboli [...] (715 aa)
     •• 0.927
PAL5
SubName- Full=Phenylalanine ammonia-lyase; (712 aa)
     •• 0.926
Ptr4CL8
4-coumarate-coa ligase (544 aa)
     •• 0.926
ACLL12
4-coumarate-coa ligase (544 aa)
     •• 0.926
CYP98A27
SubName- Full=Coumaroyl 3-hydroxylase; (508 aa)
  •  • •0.906
CCR
SubName- Full=Cinnamoyl CoA reductase; (339 aa)
     •• 0.903
Ptr4CL3
SubName- Full=4-coumarate-CoA ligase; (541 aa)
     •• 0.902
CHS
SubName- Full=Chalcone synthase (Putative uncharacterized protein);; The primary product of thi [...] (397 aa)
     •• 0.902
gw1.8531.4.1
hypothetical protein (134 aa)
     •  0.899
gw1.28.655.1
annotation not avaliable (78 aa)
     •  0.899

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query298
PLN02394 503 PLN02394, PLN02394, trans-cinnamate 4-monooxygenas 0.0
pfam00067 461 pfam00067, p450, Cytochrome P450 5e-51
PLN02183 516 PLN02183, PLN02183, ferulate 5-hydroxylase 2e-29
PLN02687 517 PLN02687, PLN02687, flavonoid 3'-monooxygenase 2e-28
PLN02966 502 PLN02966, PLN02966, cytochrome P450 83A1 7e-27
PLN03112 514 PLN03112, PLN03112, cytochrome P450 family protein 8e-26
PLN00110 504 PLN00110, PLN00110, flavonoid 3',5'-hydroxylase (F 2e-23
PLN03234 499 PLN03234, PLN03234, cytochrome P450 83B1; Provisio 2e-17
PTZ00404 482 PTZ00404, PTZ00404, cytochrome P450; Provisional 8e-12
PLN00168 519 PLN00168, PLN00168, Cytochrome P450; Provisional 2e-11
PLN02971 543 PLN02971, PLN02971, tryptophan N-hydroxylase 1e-10
PLN02655 466 PLN02655, PLN02655, ent-kaurene oxidase 2e-06
PLN03018 534 PLN03018, PLN03018, homomethionine N-hydroxylase 9e-05
COG2124 411 COG2124, CypX, Cytochrome P450 [Secondary metaboli 1e-04
PLN02936 489 PLN02936, PLN02936, epsilon-ring hydroxylase 0.003
>gnl|CDD|215221 PLN02394, PLN02394, trans-cinnamate 4-monooxygenase Back     alignment and domain information 
 Score =  601 bits (1551), Expect = 0.0
 Identities = 250/304 (82%), Positives = 273/304 (89%), Gaps = 12/304 (3%)

Query: 3   LLLLEKTLLALFAAVVVAITVSKLRGKRFKLPPGPLPVPVFGNWLQVGDDLNHRNLSDLA 62
           LLLLEKTLL LF A+V+A+ VSKLRGK+ KLPPGP  VP+FGNWLQVGDDLNHRNL+++A
Sbjct: 1   LLLLEKTLLGLFVAIVLALLVSKLRGKKLKLPPGPAAVPIFGNWLQVGDDLNHRNLAEMA 60

Query: 63  KKYGDVLLLRMGQRNLVVVSSPDHAKEVLHTQGVEFGSRTRNVVFDIFTGKGQDMVFTVY 122
           KKYGDV LLRMGQRNLVVVSSP+ AKEVLHTQGVEFGSRTRNVVFDIFTGKGQDMVFTVY
Sbjct: 61  KKYGDVFLLRMGQRNLVVVSSPELAKEVLHTQGVEFGSRTRNVVFDIFTGKGQDMVFTVY 120

Query: 123 GEHWRKMRRIMTVPFFTNKVVQQQRFNWEDEAARVVEDVKKDPEAATNGIVLRRRLQLMM 182
           G+HWRKMRRIMTVPFFTNKVVQQ R+ WE+EA  VVEDV+ +PEAAT G+V+RRRLQLMM
Sbjct: 121 GDHWRKMRRIMTVPFFTNKVVQQYRYGWEEEADLVVEDVRANPEAATEGVVIRRRLQLMM 180

Query: 183 YNNMYRIMFDRRFESQDDPLFNRLKALNGERSRLAQSFEYNYGDFIPILRPFLRGYLKIC 242
           YN MYR+MFDRRFES+DDPLF +LKALNGERSRLAQSFEYNYGDFIPILRPFLRGYLKIC
Sbjct: 181 YNIMYRMMFDRRFESEDDPLFLKLKALNGERSRLAQSFEYNYGDFIPILRPFLRGYLKIC 240

Query: 243 KEVKERRLQLFKDYFVEERN------------LKCAIDHILDAQTKGEINEDNVLYIVEN 290
           ++VKERRL LFKDYFV+ER             LKCAIDHIL+AQ KGEINEDNVLYIVEN
Sbjct: 241 QDVKERRLALFKDYFVDERKKLMSAKGMDKEGLKCAIDHILEAQKKGEINEDNVLYIVEN 300

Query: 291 INVA 294
           INVA
Sbjct: 301 INVA 304

Length = 503
>gnl|CDD|215689 pfam00067, p450, Cytochrome P450 Back     alignment and domain information
>gnl|CDD|165828 PLN02183, PLN02183, ferulate 5-hydroxylase Back     alignment and domain information
>gnl|CDD|215371 PLN02687, PLN02687, flavonoid 3'-monooxygenase Back     alignment and domain information
>gnl|CDD|178550 PLN02966, PLN02966, cytochrome P450 83A1 Back     alignment and domain information
>gnl|CDD|215583 PLN03112, PLN03112, cytochrome P450 family protein; Provisional Back     alignment and domain information
>gnl|CDD|177725 PLN00110, PLN00110, flavonoid 3',5'-hydroxylase (F3'5'H); Provisional Back     alignment and domain information
>gnl|CDD|178773 PLN03234, PLN03234, cytochrome P450 83B1; Provisional Back     alignment and domain information
>gnl|CDD|173595 PTZ00404, PTZ00404, cytochrome P450; Provisional Back     alignment and domain information
>gnl|CDD|215086 PLN00168, PLN00168, Cytochrome P450; Provisional Back     alignment and domain information
>gnl|CDD|166612 PLN02971, PLN02971, tryptophan N-hydroxylase Back     alignment and domain information
>gnl|CDD|215354 PLN02655, PLN02655, ent-kaurene oxidase Back     alignment and domain information
>gnl|CDD|178592 PLN03018, PLN03018, homomethionine N-hydroxylase Back     alignment and domain information
>gnl|CDD|225035 COG2124, CypX, Cytochrome P450 [Secondary metabolites biosynthesis, transport, and catabolism] Back     alignment and domain information
>gnl|CDD|178524 PLN02936, PLN02936, epsilon-ring hydroxylase Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 298
KOG0156 489 consensus Cytochrome P450 CYP2 subfamily [Secondar 100.0
PLN02971 543 tryptophan N-hydroxylase 100.0
PLN02394 503 trans-cinnamate 4-monooxygenase 100.0
PLN02687 517 flavonoid 3'-monooxygenase 100.0
PLN03234 499 cytochrome P450 83B1; Provisional 100.0
PLN02183 516 ferulate 5-hydroxylase 100.0
PLN03112 514 cytochrome P450 family protein; Provisional 99.98
PLN00110 504 flavonoid 3',5'-hydroxylase (F3'5'H); Provisional 99.98
PLN00168 519 Cytochrome P450; Provisional 99.98
PLN02655 466 ent-kaurene oxidase 99.97
PLN03018 534 homomethionine N-hydroxylase 99.97
PLN02966 502 cytochrome P450 83A1 99.97
PTZ00404 482 cytochrome P450; Provisional 99.96
KOG0158 499 consensus Cytochrome P450 CYP3/CYP5/CYP6/CYP9 subf 99.96
PLN02290 516 cytokinin trans-hydroxylase 99.96
PLN02500 490 cytochrome P450 90B1 99.96
KOG0157 497 consensus Cytochrome P450 CYP4/CYP19/CYP26 subfami 99.95
PLN02774 463 brassinosteroid-6-oxidase 99.94
PF00067 463 p450: Cytochrome P450 p450 superfamily signature b 99.94
PLN02196 463 abscisic acid 8'-hydroxylase 99.94
PLN02987 472 Cytochrome P450, family 90, subfamily A 99.94
PLN02169 500 fatty acid (omega-1)-hydroxylase/midchain alkane h 99.94
PLN02302 490 ent-kaurenoic acid oxidase 99.93
PLN03141 452 3-epi-6-deoxocathasterone 23-monooxygenase; Provis 99.93
PLN03195 516 fatty acid omega-hydroxylase; Provisional 99.92
PLN02738 633 carotene beta-ring hydroxylase 99.9
PLN02936 489 epsilon-ring hydroxylase 99.9
KOG0159 519 consensus Cytochrome P450 CYP11/CYP12/CYP24/CYP27 99.87
PLN02426 502 cytochrome P450, family 94, subfamily C protein 99.79
PLN02648 480 allene oxide synthase 99.7
KOG0684 486 consensus Cytochrome P450 [Secondary metabolites b 99.58
COG2124 411 CypX Cytochrome P450 [Secondary metabolites biosyn 99.54
>KOG0156 consensus Cytochrome P450 CYP2 subfamily [Secondary metabolites biosynthesis, transport and catabolism] Back     alignment and domain information 
Probab=100.00  E-value=1.8e-44  Score=325.86  Aligned_cols=262  Identities=34%  Similarity=0.529  Sum_probs=208.3

Q ss_pred             CCCCCCCCCCccccccccCCCCcchHHHHHHHHHhCCeEEEeeCCeeEEEeCCHHHHHHHHHhcCccccCCCCc-chhhh
Q 022341           31 FKLPPGPLPVPVFGNWLQVGDDLNHRNLSDLAKKYGDVLLLRMGQRNLVVVSSPDHAKEVLHTQGVEFGSRTRN-VVFDI  109 (298)
Q Consensus        31 ~~~ppGP~~~PiiGnl~~l~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvi~~p~~i~evl~~~~~~f~~r~~~-~~~~~  109 (298)
                      .++||||+++|||||++++....+|..+.+|+++|||+|++|+|+.|+|||||+++|+|+|.+++..|++||.. ...+.
T Consensus        25 ~~lPPGP~~lPiIGnl~~l~~~~~h~~~~~ls~~yGpi~tl~lG~~~~Vviss~~~akE~l~~~d~~fa~Rp~~~~~~~~  104 (489)
T KOG0156|consen   25 RNLPPGPPPLPIIGNLHQLGSLPPHRSFRKLSKKYGPVFTLRLGSVPVVVISSYEAAKEVLVKQDLEFADRPDPTATLKY  104 (489)
T ss_pred             CCCCcCCCCCCccccHHHcCCCchhHHHHHHHHHhCCeEEEEecCceEEEECCHHHHHHHHHhCCccccCCCCchhhHHH
Confidence            68999999999999999998766899999999999999999999999999999999999999999999999972 34456


Q ss_pred             hccCCCceEEecCChhHHHHhhhhcccccchHHHHhhHHHHHHHHHHHHHHHhcCcccccCChhhHHH-HHHHHHHHHHH
Q 022341          110 FTGKGQDMVFTVYGEHWRKMRRIMTVPFFTNKVVQQQRFNWEDEAARVVEDVKKDPEAATNGIVLRRR-LQLMMYNNMYR  188 (298)
Q Consensus       110 ~~~~~~~~~~~~~g~~Wk~~Rk~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~-~~~~~~~~i~~  188 (298)
                      +.+++.++++++||+.||.+||+.+..+++.+..+++.+...+|++.+++.+.+ .+. . +++++.. +...+.|+||+
T Consensus       105 ~~~~~~~i~~a~yG~~Wr~~Rr~~~~~L~~~~~~~~~~~~R~~E~~~l~~~l~~-~~~-~-~~vdl~~~l~~~~~nvI~~  181 (489)
T KOG0156|consen  105 LSYGGKGIVFAPYGDYWREMRRFALTELRSFGRGKSFMEIREEEVDELVKKLSK-SKK-G-EPVDLSELLDLLVGNVICR  181 (489)
T ss_pred             hcCCCCceEeCCCcHHHHHHHHHHHHHhcChhhhhhhHHHHHHHHHHHHHHHHh-cCC-C-ceeeHHHHHHHHHHHHHHH
Confidence            665788899998999999999999999999999998888889999999999987 221 2 4677664 45556677999


Q ss_pred             HHhccccCCCCchHHHHHHHHHHHHHhhhhccCCccccccc-ccc--ccchhhHHHHHHHHHHHHHHHHHHHHHhcc---
Q 022341          189 IMFDRRFESQDDPLFNRLKALNGERSRLAQSFEYNYGDFIP-ILR--PFLRGYLKICKEVKERRLQLFKDYFVEERN---  262 (298)
Q Consensus       189 ~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p-~l~--~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~---  262 (298)
                      ++||.+++.++++....++.+..+.......+  .+.|++| +++  ++..+..+..+.. .++++.+.++++++|.   
T Consensus       182 ~~fG~rf~~~~~~~~~~~~~l~~~~~~~~~~~--~~~d~~p~~l~~~~~~~g~~~~~~~~-~~~~~~~~~~~i~eh~~~~  258 (489)
T KOG0156|consen  182 MLFGRRFEEEDEEEFLELKELVEESLELLGSF--NLSDYFPFLLRWLDGISGLEKRLKKV-SKRLDEFLERIIDEHREKI  258 (489)
T ss_pred             HHhCCccccCCchHHHHHHHHHHHHHHHhCCc--cHHHHhhHHHHhcccccHHHHHHHHH-HHHHHHHHHHHHHHHHhhh
Confidence            99999998765565665666665555554433  4568888 554  3233444444332 3446677777776652   


Q ss_pred             ----cCChHHHHHhhcc--cCC-CCHHHHHHHHHHHhhcccCC
Q 022341          263 ----LKCAIDHILDAQT--KGE-INEDNVLYIVENINVAGMFI  298 (298)
Q Consensus       263 ----~~d~ld~ll~~~~--~~~-~t~~~i~~~~~~l~~aG~~~  298 (298)
                          .+||+|.||+.++  +.. +|+++|+..+.|+++||++|
T Consensus       259 ~~~~~~D~vD~lL~~~~~~~~~~~t~~~i~~~~~dl~~AGtdT  301 (489)
T KOG0156|consen  259 GDEEGRDFVDALLKLMKEEKAEGLTDDHLKALILDLFLAGTDT  301 (489)
T ss_pred             ccCCCCcHHHHHHHhhcccccCCCCHHHHHHHHHHHHhcccch
Confidence                1799999998643  223 99999999999999999985

>PLN02971 tryptophan N-hydroxylase Back     alignment and domain information
>PLN02394 trans-cinnamate 4-monooxygenase Back     alignment and domain information
>PLN02687 flavonoid 3'-monooxygenase Back     alignment and domain information
>PLN03234 cytochrome P450 83B1; Provisional Back     alignment and domain information
>PLN02183 ferulate 5-hydroxylase Back     alignment and domain information
>PLN03112 cytochrome P450 family protein; Provisional Back     alignment and domain information
>PLN00110 flavonoid 3',5'-hydroxylase (F3'5'H); Provisional Back     alignment and domain information
>PLN00168 Cytochrome P450; Provisional Back     alignment and domain information
>PLN02655 ent-kaurene oxidase Back     alignment and domain information
>PLN03018 homomethionine N-hydroxylase Back     alignment and domain information
>PLN02966 cytochrome P450 83A1 Back     alignment and domain information
>PTZ00404 cytochrome P450; Provisional Back     alignment and domain information
>KOG0158 consensus Cytochrome P450 CYP3/CYP5/CYP6/CYP9 subfamilies [Secondary metabolites biosynthesis, transport and catabolism] Back     alignment and domain information
>PLN02290 cytokinin trans-hydroxylase Back     alignment and domain information
>PLN02500 cytochrome P450 90B1 Back     alignment and domain information
>KOG0157 consensus Cytochrome P450 CYP4/CYP19/CYP26 subfamilies [Secondary metabolites biosynthesis, transport and catabolism; Lipid transport and metabolism] Back     alignment and domain information
>PLN02774 brassinosteroid-6-oxidase Back     alignment and domain information
>PF00067 p450: Cytochrome P450 p450 superfamily signature b-class p450 signature mitochondrial p450 signature E-class p450 group I signature E-class p450 group II signature E-class p450 group IV signature; InterPro: IPR001128 Cytochrome P450 enzymes are a superfamily of haem-containing mono-oxygenases that are found in all kingdoms of life, and which show extraordinary diversity in their reaction chemistry Back     alignment and domain information
>PLN02196 abscisic acid 8'-hydroxylase Back     alignment and domain information
>PLN02987 Cytochrome P450, family 90, subfamily A Back     alignment and domain information
>PLN02169 fatty acid (omega-1)-hydroxylase/midchain alkane hydroxylase Back     alignment and domain information
>PLN02302 ent-kaurenoic acid oxidase Back     alignment and domain information
>PLN03141 3-epi-6-deoxocathasterone 23-monooxygenase; Provisional Back     alignment and domain information
>PLN03195 fatty acid omega-hydroxylase; Provisional Back     alignment and domain information
>PLN02738 carotene beta-ring hydroxylase Back     alignment and domain information
>PLN02936 epsilon-ring hydroxylase Back     alignment and domain information
>KOG0159 consensus Cytochrome P450 CYP11/CYP12/CYP24/CYP27 subfamilies [Secondary metabolites biosynthesis, transport and catabolism] Back     alignment and domain information
>PLN02426 cytochrome P450, family 94, subfamily C protein Back     alignment and domain information
>PLN02648 allene oxide synthase Back     alignment and domain information
>KOG0684 consensus Cytochrome P450 [Secondary metabolites biosynthesis, transport and catabolism] Back     alignment and domain information
>COG2124 CypX Cytochrome P450 [Secondary metabolites biosynthesis, transport, and catabolism] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query298
3pm0_A 507 Structural Characterization Of The Complex Between 4e-10
3ruk_A 494 Human Cytochrome P450 Cyp17a1 In Complex With Abira 5e-10
2q6n_A 478 Structure Of Cytochrome P450 2b4 With Bound 1-(4- C 2e-09
4h1n_A 479 Crystal Structure Of P450 2b4 F297a Mutant In Compl 2e-09
1suo_A 476 Structure Of Mammalian Cytochrome P450 2b4 With Bou 2e-09
3tk3_A 476 Cytochrome P450 2b4 Mutant L437a In Complex With 4- 2e-09
1po5_A 476 Structure Of Mammalian Cytochrome P450 2b4 Length = 2e-09
1r9o_A 477 Crystal Structure Of P4502c9 With Flurbiprofen Boun 3e-09
1og2_A 475 Structure Of Human Cytochrome P450 Cyp2c9 Length = 4e-09
2pg6_A 476 Crystal Structure Of Human Microsomal P450 2a6 L240 4e-07
2pg5_A 476 Crystal Structure Of Human Microsomal P450 2a6 N297 4e-07
1z10_A 476 Crystal Structure Of Human Microsomal P450 2a6 With 5e-07
2p85_A 476 Structure Of Human Lung Cytochrome P450 2a13 With I 5e-07
2pg7_A 476 Crystal Structure Of Human Microsomal P450 2a6 N297 5e-07
3ebs_A 476 Human Cytochrome P450 2a6 I208sI300FG301AS369G IN C 5e-07
4i8v_A 491 Human Cytochrome P450 1a1 In Complex With Alpha-nap 2e-06
4gqs_A 477 Structure Of Human Microsomal Cytochrome P450 (cyp) 2e-06
3ibd_A 476 Crystal Structure Of A Cytochrome P450 2b6 Genetic 3e-06
1dt6_A 473 Structure Of Mammalian Cytochrome P450 2c5 Length = 1e-05
2hi4_A 495 Crystal Structure Of Human Microsomal P450 1a2 In C 4e-05
2q9f_A 456 Crystal Structure Of Human Cytochrome P450 46a1 In 1e-04
1pq2_A 476 Crystal Structure Of Human Drug Metabolizing Cytoch 2e-04
>pdb|3PM0|A Chain A, Structural Characterization Of The Complex Between Alpha- Naphthoflavone And Human Cytochrome P450 1b1 (Cyp1b1) Length = 507 Back     alignment and structure 
Iteration: 1

 Score = 62.0 bits (149), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 51/167 (30%), Positives = 77/167 (46%), Gaps = 10/167 (5%)
Query: 55  HRNLSDLAKKYGDVLLLRMGQRNLVVVSSPDHAKEVLHTQGVEFGSRTRNVVFDIFTGKG 114
           H + + LA++YGDV  +R+G   +VV++      + L  QG  F  R     F + +G G
Sbjct: 31  HLSFARLARRYGDVFQIRLGSCPIVVLNGERAIHQALVQQGSAFADRPSFASFRVVSG-G 89
Query: 115 QDMVFTVYGEHWRKMRRI---MTVPFFTNKVVQQQRFNWE--DEAARVVEDVKKDPEAAT 169
           + M F  Y EHW+  RR    M   FFT +   +Q        EA  +V  + +   +A 
Sbjct: 90  RSMAFGHYSEHWKVQRRAAHSMMRNFFTRQPRSRQVLEGHVLSEARELVALLVRG--SAD 147
Query: 170 NGIVLRRRLQLMMYNN-MYRIMFDRRFESQDDPLFNRLKALNGERSR 215
              +  R L ++   N M  + F  R+ S DDP F  L + N E  R
Sbjct: 148 GAFLDPRPLTVVAVANVMSAVCFGCRY-SHDDPEFRELLSHNEEFGR 193
>pdb|3RUK|A Chain A, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone Length = 494 Back     alignment and structure
>pdb|2Q6N|A Chain A, Structure Of Cytochrome P450 2b4 With Bound 1-(4- Cholorophenyl)imidazole Length = 478 Back     alignment and structure
>pdb|4H1N|A Chain A, Crystal Structure Of P450 2b4 F297a Mutant In Complex With Anti- Platelet Drug Clopidogrel Length = 479 Back     alignment and structure
>pdb|1SUO|A Chain A, Structure Of Mammalian Cytochrome P450 2b4 With Bound 4-(4- Chlorophenyl)imidazole Length = 476 Back     alignment and structure
>pdb|3TK3|A Chain A, Cytochrome P450 2b4 Mutant L437a In Complex With 4-(4-Chlorophenyl) Imidazole Length = 476 Back     alignment and structure
>pdb|1PO5|A Chain A, Structure Of Mammalian Cytochrome P450 2b4 Length = 476 Back     alignment and structure
>pdb|1R9O|A Chain A, Crystal Structure Of P4502c9 With Flurbiprofen Bound Length = 477 Back     alignment and structure
>pdb|1OG2|A Chain A, Structure Of Human Cytochrome P450 Cyp2c9 Length = 475 Back     alignment and structure
>pdb|2PG6|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q Length = 476 Back     alignment and structure
>pdb|2PG5|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 N297q Length = 476 Back     alignment and structure
>pdb|1Z10|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 With Coumarin Bound Length = 476 Back     alignment and structure
>pdb|2P85|A Chain A, Structure Of Human Lung Cytochrome P450 2a13 With Indole Bound In Two Alternate Conformations Length = 476 Back     alignment and structure
>pdb|2PG7|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V Length = 476 Back     alignment and structure
>pdb|3EBS|A Chain A, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX With Phenacetin Length = 476 Back     alignment and structure
>pdb|4I8V|A Chain A, Human Cytochrome P450 1a1 In Complex With Alpha-naphthoflavone Length = 491 Back     alignment and structure
>pdb|4GQS|A Chain A, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19 Length = 477 Back     alignment and structure
>pdb|3IBD|A Chain A, Crystal Structure Of A Cytochrome P450 2b6 Genetic Variant In Complex With The Inhibitor 4-(4-Chlorophenyl)imidazole Length = 476 Back     alignment and structure
>pdb|1DT6|A Chain A, Structure Of Mammalian Cytochrome P450 2c5 Length = 473 Back     alignment and structure
>pdb|2HI4|A Chain A, Crystal Structure Of Human Microsomal P450 1a2 In Complex With Alpha-Naphthoflavone Length = 495 Back     alignment and structure
>pdb|2Q9F|A Chain A, Crystal Structure Of Human Cytochrome P450 46a1 In Complex With Cholesterol-3-Sulphate Length = 456 Back     alignment and structure
>pdb|1PQ2|A Chain A, Crystal Structure Of Human Drug Metabolizing Cytochrome P450 2c8 Length = 476 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query298
3qz1_A 496 Steroid 21-hydroxylase; P450 monooxygenase, oxidor 6e-46
2hi4_A 495 Cytochrome P450 1A2; CYP1A2, monooxygenase, drug m 7e-45
3swz_A 494 Steroid 17-alpha-hydroxylase/17,20 lyase; cytochro 3e-44
3pm0_A 507 Cypib1, cytochrome P450 1B1; CYP1B1, monooxygenase 1e-40
3tbg_A 479 Cytochrome P450 2D6; monooxygenase, thioridazine, 5e-40
3czh_A 481 Cytochrome P450 2R1; vitamin D, vitamin S 25-hydro 3e-39
3n9y_A 487 Cholesterol SIDE-chain cleavage enzyme; cytochrome 9e-39
3e6i_A 476 CYPIIE1, P450-J, cytochrome P450 2E1; CYP2E1, mono 4e-38
1r9o_A 477 Cytochrome P450 2C9; monooxygenase, drug metaboliz 6e-38
3b98_A 475 Prostaglandin I2 synthase; prostacyclin synthase, 8e-37
3k9v_A 482 1,25-dihydroxyvitamin D(3) 24-hydroxylase, mitocho 2e-36
1po5_A 476 Cytochrome P450 2B4; oxidoreductase, membrane prot 4e-36
2fdv_A 476 Cytochrome P450 2A6; CYP2A6, monooxygenase, drug m 1e-35
3dax_A 491 Cytochrome P450 7A1; cholesterol, cholesterol 7-al 2e-28
3s79_A 503 Cytochrome P450 19A1; oxidoreductase; HET: HEM ASD 4e-23
3b6h_A 498 Prostacyclin synthase; enzyme-inhibitor complex, C 2e-20
2ij2_A 470 Cytochrome P450 BM3; monoxygenase, heme binding pr 1e-19
3awm_A 415 Fatty acid alpha-hydroxylase; cytochrome P450, per 6e-19
2cib_A 455 Cytochrome P450 51; heme, heme lipid synthesis, me 1e-18
2ve3_A 444 Putative cytochrome P450 120; oxidoreductase, mono 3e-17
1izo_A 417 P450bsbeta, cytochrome P450 152A1; heme protein, p 6e-17
3dbg_A 467 Putative cytochrome P450; cytochrome P450 oxidored 1e-16
3mdm_A 456 Cholesterol 24-hydroxylase; CYP46A1, P450 46A1, th 5e-15
3i3k_A 461 Lanosterol 14-alpha demethylase; cytochrome P450, 4e-14
3gw9_A 450 Sterol 14alpha-demethylase; CYP51, cytochrome P450 6e-14
1n97_A 389 CYP175A1; electron transport; HET: SRT HEM; 1.80A 2e-11
3nxu_A 485 Cytochrome P450 3A4; alpha beta protein, cytochrom 5e-08
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 2e-05
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 5e-04
>3qz1_A Steroid 21-hydroxylase; P450 monooxygenase, oxidoreductase; HET: HEM 3QZ; 3.00A {Bos taurus} Length = 496 Back     alignment and structure
 Score =  160 bits (407), Expect = 6e-46
 Identities = 51/302 (16%), Positives = 114/302 (37%), Gaps = 26/302 (8%)

Query: 10  LLALFAAVVVAITVSKLRGKRFKLPPGPLPVPVFGNWLQVGDDLNHRNLSDLAKKYGDVL 69
           +LA    ++  +  + L   R+KL    LP P+   +L +       +L  L +K G V 
Sbjct: 2   VLAGLLLLLTLLAGAHLLWGRWKLRNLHLP-PLVPGFLHLLQPNLPIHLLSLTQKLGPVY 60

Query: 70  LLRMGQRNLVVVSSPDHAKEVLHTQGVEFGSRTRNVVFDIFTGKGQDMVFTVYGEHWRKM 129
            LR+G + +VV++S    +E +  + V+F  R +   + + + + QD+    Y   W+  
Sbjct: 61  RLRLGLQEVVVLNSKRTIEEAMIRKWVDFAGRPQIPSYKLVSQRCQDISLGDYSLLWKAH 120

Query: 130 RRI--MTVPFFTNKVVQQQRFNWEDEAARVVEDVKKDPEAATNGIVLRRRLQLMMYNNMY 187
           +++    +   T   ++      +       E ++    A      +++   L+  + + 
Sbjct: 121 KKLTRSALLLGTRSSMEPWV---DQLTQEFCERMRVQAGAPVT---IQKEFSLLTCSIIC 174

Query: 188 RIMFDRRFESQDDPLFNRLKALNGERSRLAQSFEYNYGDFIPILRPFLRGYLKICKEVKE 247
            + F  + +      F+          +    +     D +P LR F    L   K+  E
Sbjct: 175 YLTFGNKED-TLVHAFHDCVQDL---MKTWDHWSIQILDMVPFLRFFPNPGLWRLKQAIE 230

Query: 248 RRLQLFKDYFVEER------NLKCAIDHILDAQTK-------GEINEDNVLYIVENINVA 294
            R  + +      +        +   D++L    +       G++ E +V   V ++ + 
Sbjct: 231 NRDHMVEKQLRRHKESMVAGQWRDMTDYMLQGVGRQRVEEGPGQLLEGHVHMSVVDLFIG 290

Query: 295 GM 296
           G 
Sbjct: 291 GT 292
>2hi4_A Cytochrome P450 1A2; CYP1A2, monooxygenase, drug metabolizing enzyme, alpha-naphthoflavone, benzo(H)flavone, 7,8- benzoflavone, oxidoreductase; HET: HEM BHF; 1.95A {Homo sapiens} Length = 495 Back     alignment and structure
>3swz_A Steroid 17-alpha-hydroxylase/17,20 lyase; cytochrome P450, CYP17A1, P450C17, P450 17A1, monooxyg 17A-hydroxylase, heme protein; HET: HEM TOK; 2.40A {Homo sapiens} PDB: 3ruk_A* Length = 494 Back     alignment and structure
>3pm0_A Cypib1, cytochrome P450 1B1; CYP1B1, monooxygenase, alpha-naphthoflavone, 17BETA-estradiol, oxidoreductase; HET: HEM BHF; 2.70A {Homo sapiens} Length = 507 Back     alignment and structure
>3tbg_A Cytochrome P450 2D6; monooxygenase, thioridazine, oxidoreductase; HET: RTZ HEM; 2.10A {Homo sapiens} PDB: 3qm4_A* 2f9q_A* Length = 479 Back     alignment and structure
>3czh_A Cytochrome P450 2R1; vitamin D, vitamin S 25-hydroxylase, drug metabolism, structural genomics, structural genomics consortium, SGC; HET: BCD HEM D2V; 2.30A {Homo sapiens} SCOP: a.104.1.1 PDB: 2ojd_A* 3c6g_A* 3dl9_A* Length = 481 Back     alignment and structure
>3n9y_A Cholesterol SIDE-chain cleavage enzyme; cytochrome P450, cholesterol SIDE chain cleavage, structural genomics, structural genomics consortium, SGC; HET: HEM CLR; 2.10A {Homo sapiens} PDB: 3n9z_A* 3na1_A* 3na0_A* 3mzs_A* Length = 487 Back     alignment and structure
>3e6i_A CYPIIE1, P450-J, cytochrome P450 2E1; CYP2E1, monooxygenase, acetaminophen, oxidoreductase, heme, endoplasmic reticulum, iron, membrane; HET: HEM; 2.20A {Homo sapiens} PDB: 3e4e_A* 3gph_A* 3koh_A* 3lc4_A* 3t3z_A* Length = 476 Back     alignment and structure
>1r9o_A Cytochrome P450 2C9; monooxygenase, drug metabolizing enzyme, oxidoreductas; HET: HEM FLP; 2.00A {Homo sapiens} SCOP: a.104.1.1 PDB: 1og5_A* 1og2_A* 2nnj_A* 1pq2_A* 2nni_A* 2nnh_A* 2vn0_A* 1nr6_A* 1dt6_A* 1n6b_A* Length = 477 Back     alignment and structure
>3b98_A Prostaglandin I2 synthase; prostacyclin synthase, cytochrome P450 8A1, CYP8A1, isomerase; HET: HEM; 2.08A {Danio rerio} PDB: 3b99_A* Length = 475 Back     alignment and structure
>3k9v_A 1,25-dihydroxyvitamin D(3) 24-hydroxylase, mitochondrial; mitochondrial cytochrome P450, monotopic membrane protein, monooxygenase; HET: HEM CPS; 2.50A {Rattus norvegicus} PDB: 3k9y_A* Length = 482 Back     alignment and structure
>1po5_A Cytochrome P450 2B4; oxidoreductase, membrane protein, CYP 2B4, CYP LM2, cytochro monooxygenase; HET: HEM; 1.60A {Oryctolagus cuniculus} SCOP: a.104.1.1 PDB: 3mvr_A* 2bdm_A* 3g5n_A* 3g93_A* 3kw4_A* 3me6_A* 1suo_A* 3r1a_A* 3r1b_A* 2q6n_A* 3tk3_A* 3ibd_A* 3qoa_A* 3qu8_A* Length = 476 Back     alignment and structure
>2fdv_A Cytochrome P450 2A6; CYP2A6, monooxygenase, drug metabolizing enzyme, coumarin 7-hydroxylase, nicotine oxidase, oxidoreductase; HET: HEM D2G; 1.65A {Homo sapiens} PDB: 1z11_A* 1z10_A* 2fdu_A* 2fdw_A* 2fdy_A* 3t3r_A* 2pg5_A* 2pg7_A* 2pg6_A* 3t3q_A* 3ebs_A* 2p85_A* 3t3s_A* Length = 476 Back     alignment and structure
>3dax_A Cytochrome P450 7A1; cholesterol, cholesterol 7-alpha hydroxylase, structural genomics, structural genomics consortium, SGC, cholesterol metabolism; HET: HEM; 2.15A {Homo sapiens} PDB: 3sn5_A* Length = 491 Back     alignment and structure
>3s79_A Cytochrome P450 19A1; oxidoreductase; HET: HEM ASD; 2.75A {Homo sapiens} PDB: 3eqm_A* 3s7s_A* Length = 503 Back     alignment and structure
>3b6h_A Prostacyclin synthase; enzyme-inhibitor complex, CYP8A1, cytochrome P450, endoplasmic reticulum, fatty acid biosynthesis, heme, iron, isomerase; HET: BOG MXD HEM; 1.62A {Homo sapiens} PDB: 2iag_A* Length = 498 Back     alignment and structure
>2ij2_A Cytochrome P450 BM3; monoxygenase, heme binding protein, atomic resolution, oxidoreductase; HET: HEM; 1.20A {Bacillus megaterium} SCOP: a.104.1.1 PDB: 2hpd_A* 1fag_A* 1jpz_A* 1zo9_A* 1zo4_A* 1zoa_A* 3m4v_A* 3ekb_A* 3ben_A* 1fah_A* 2nnb_A* 3kx3_A* 3ekd_A* 3ekf_A* 1smi_A* 1smj_A* 3kx4_A* 2ij3_A* 2ij4_A* 3hf2_A* ... Length = 470 Back     alignment and structure
>3awm_A Fatty acid alpha-hydroxylase; cytochrome P450, peroxygenase, oxidoreductase; HET: HEM PLM; 1.65A {Sphingomonas paucimobilis} PDB: 3awq_A* 3awp_A* Length = 415 Back     alignment and structure
>2cib_A Cytochrome P450 51; heme, heme lipid synthesis, metal-binding, monooxygenase, NADP, oxidoreductase, protein-inhibitor complex; HET: HEM CM6; 1.50A {Mycobacterium tuberculosis} SCOP: a.104.1.1 PDB: 2bz9_A* 1x8v_A* 2ci0_A* 2vku_A* 2w09_A* 2w0b_A* 2w0a_A* 1h5z_A* 1ea1_A* 1e9x_A* 1u13_A* Length = 455 Back     alignment and structure
>2ve3_A Putative cytochrome P450 120; oxidoreductase, monooxygenase, metal-binding, heme, iron; HET: HEM REA; 2.10A {Synechocystis SP} PDB: 2ve4_A* Length = 444 Back     alignment and structure
>1izo_A P450bsbeta, cytochrome P450 152A1; heme protein, protein-fatty acid complex, riken structural genomics/proteomics initiative, RSGI; HET: HEM PAM; 2.10A {Bacillus subtilis} SCOP: a.104.1.1 PDB: 2zqj_A* 2zqx_A* Length = 417 Back     alignment and structure
>3dbg_A Putative cytochrome P450; cytochrome P450 oxidoreductase, CYP170A1, molecular mechanism, heme, iron, metal-binding, monooxygenase; HET: HEM; 2.60A {Streptomyces coelicolor A3} PDB: 3el3_A* Length = 467 Back     alignment and structure
>3mdm_A Cholesterol 24-hydroxylase; CYP46A1, P450 46A1, thioperamide, monooxygenase, metab enzyme, oxidoreductase, heme, cholesterol metabolism; HET: HEM FJZ; 1.60A {Homo sapiens} PDB: 2q9g_A* 2q9f_A* 3mdr_A* 3mdt_A* 3mdv_A* Length = 456 Back     alignment and structure
>3gw9_A Sterol 14alpha-demethylase; CYP51, cytochrome P450, heme, oxidoreductase, monooxygenase, sterol biosynthesis, lipids, endoplasmic reticulum; HET: HEM VNI; 1.87A {Trypanosoma brucei} PDB: 3g1q_A* 3p99_A* 2wv2_A* 2x2n_A* 3khm_A* 3k1o_A* 3ksw_A* 2wx2_A* 2wuz_A* 3l4d_A* Length = 450 Back     alignment and structure
>1n97_A CYP175A1; electron transport; HET: SRT HEM; 1.80A {Thermus thermophilus} SCOP: a.104.1.1 PDB: 1wiy_A* Length = 389 Back     alignment and structure
>3nxu_A Cytochrome P450 3A4; alpha beta protein, cytochrome P450 fold, hemoprotein, monoo cytochrome P450 reductase, endoplasmic reticulum; HET: HEM RIT; 2.00A {Homo sapiens} PDB: 1w0e_A* 1w0g_A* 2j0d_A* 2v0m_A* 1w0f_A* 1tqn_A* 3ua1_A* 3tjs_A* Length = 485 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query298
3swz_A 494 Steroid 17-alpha-hydroxylase/17,20 lyase; cytochro 100.0
3e6i_A 476 CYPIIE1, P450-J, cytochrome P450 2E1; CYP2E1, mono 99.97
3tbg_A 479 Cytochrome P450 2D6; monooxygenase, thioridazine, 99.97
3s79_A 503 Cytochrome P450 19A1; oxidoreductase; HET: HEM ASD 99.97
3pm0_A 507 Cypib1, cytochrome P450 1B1; CYP1B1, monooxygenase 99.97
3qz1_A 496 Steroid 21-hydroxylase; P450 monooxygenase, oxidor 99.97
3nxu_A 485 Cytochrome P450 3A4; alpha beta protein, cytochrom 99.96
1r9o_A 477 Cytochrome P450 2C9; monooxygenase, drug metaboliz 99.96
3czh_A 481 Cytochrome P450 2R1; vitamin D, vitamin S 25-hydro 99.96
3k9v_A 482 1,25-dihydroxyvitamin D(3) 24-hydroxylase, mitocho 99.96
1po5_A 476 Cytochrome P450 2B4; oxidoreductase, membrane prot 99.96
2fdv_A 476 Cytochrome P450 2A6; CYP2A6, monooxygenase, drug m 99.96
2hi4_A 495 Cytochrome P450 1A2; CYP1A2, monooxygenase, drug m 99.96
3gw9_A 450 Sterol 14alpha-demethylase; CYP51, cytochrome P450 99.95
3ld6_A 461 Lanosterol 14-alpha demethylase; cytochrome P450, 99.95
2ij2_A 470 Cytochrome P450 BM3; monoxygenase, heme binding pr 99.94
3i3k_A 461 Lanosterol 14-alpha demethylase; cytochrome P450, 99.94
3n9y_A 487 Cholesterol SIDE-chain cleavage enzyme; cytochrome 99.94
2cib_A 455 Cytochrome P450 51; heme, heme lipid synthesis, me 99.93
2ve3_A 444 Putative cytochrome P450 120; oxidoreductase, mono 99.92
3dbg_A 467 Putative cytochrome P450; cytochrome P450 oxidored 99.92
3v8d_A 491 Cholesterol 7-alpha-monooxygenase; cytochrome, oxi 99.91
2cd8_A 436 Cytochrome P450 monooxygenase; oxidoreductase, PIK 99.9
1jfb_A 404 Nitric-oxide reductase cytochrome P450 55A1; cytoc 99.88
3dax_A 491 Cytochrome P450 7A1; cholesterol, cholesterol 7-al 99.88
3mdm_A 456 Cholesterol 24-hydroxylase; CYP46A1, P450 46A1, th 99.87
1cpt_A 428 Cytochrome P450-TERP; oxidoreductase(oxygenase); H 99.87
3b6h_A 498 Prostacyclin synthase; enzyme-inhibitor complex, C 99.87
1n97_A 389 CYP175A1; electron transport; HET: SRT HEM; 1.80A 99.86
1ued_A 406 P450 OXYC, P450 monooxygenase; cytochrome P450 van 99.85
3b98_A 475 Prostaglandin I2 synthase; prostacyclin synthase, 99.84
2zbx_A 412 Cytochrome P450-SU1; beta prism, heme, iron, metal 99.83
3ivy_A 433 Cytochrome P450 CYP125; cholesterol, monooxygenase 99.83
2zwu_A 415 Camphor 5-monooxygenase; P450CAM, camphor-hydroxyl 99.81
1izo_A 417 P450bsbeta, cytochrome P450 152A1; heme protein, p 99.81
3awm_A 415 Fatty acid alpha-hydroxylase; cytochrome P450, per 99.8
3oo3_A 384 OXY protein; cytochrome P450, monooxygenase, PCD-t 99.8
3ejb_B 404 Biotin biosynthesis cytochrome P450-like enzyme; p 99.8
1s1f_A 406 Putative cytochrome P450; cytochrome P450 oxidored 99.8
3aba_A 403 Cytochrome P450; oxidoreductase, heme, monooxygena 99.78
3abb_A 408 CYP105D6, cytochrome P450 hydroxylase; oxidoreduct 99.77
3dsk_A 495 Cytochrome P450 74A, chloroplast; P450 fold, fatty 99.77
3tkt_A 450 Cytochrome P450; aromatic hydrocarbon binding of P 99.77
2wm5_A 435 CYP124, putative cytochrome P450 124; metal-bindin 99.76
2jjn_A 411 Cytochrome P450 113A1; oxidoreductase, iron, heme, 99.75
2z3t_A 425 Cytochrome P450; monoxygenase, oxydoreductase, hem 99.75
3tyw_A 417 Putative cytochrome P450; P450 monooxygenase, oxid 99.75
4fb2_A 398 P450CIN; heme, monooxygenase, cindoxin, oxidoreduc 99.75
1odo_A 408 Putative cytochrome P450 154A1; P450 monooxygenase 99.75
3lxh_A 421 Cytochrome P450; heme, iron, metal-binding, monoox 99.75
3a4g_A 411 Vitamin D hydroxylase; cytochrome P450, hemoprotei 99.75
3r9b_A 418 Cytochrome P450 164A2; monooxygenase, oxidoreducta 99.75
2z36_A 413 MOXA, cytochrome P450 type compactin 3'',4''- hydr 99.75
1q5d_A 419 P450 epoxidase; cytochrome P450, epothilone, oxydo 99.75
2xkr_A 398 CYP142, putative cytochrome P450 142; oxidoreducta 99.74
1z8o_A 404 6-deoxyerythronolide B hydroxylase; heme, CYP, ery 99.74
2y5n_A 417 MYCG, P-450-like protein; oxidoreductase, mycinami 99.73
1gwi_A 411 CYP154C1, cytochrome P450 154C1; oxidoreductase, m 99.73
2uuq_A 414 CYP130, cytochrome P450 130; iron, heme, monooxyge 99.72
3dan_A 473 Cytochrome P450 74A2; AOS heme cytochrome P450 str 99.71
3oft_A 396 Cytochrome P450, CYP101C1; oxidoreductase; HET: HE 99.71
3buj_A 397 CALO2; heme, iron, metal-binding, monooxygenase, o 99.7
3nc3_A 441 Cytochrome P450 CYPX; cytochrome P450 oxidase, HAE 99.69
3mgx_A 415 Putative P450 monooxygenase; cytochrome P450 oxida 99.69
2xbk_A 404 PIMD protein; epoxidation, oxidoreductase; HET: HE 99.68
1lfk_A 398 OXYB, P450 monooxygenase; oxidative phenol couplin 99.68
2dkk_A 411 Cytochrome P450; CYP158A1, INHI oxidoreductase; HE 99.67
3rwl_A 426 Cytochrome P450 alkane hydroxylase 1 CYP153A7; P45 99.66
3b4x_A 367 367AA long hypothetical cytochrome P450; HEM prote 99.65
1n40_A 396 P450 MT2, cytochrome P450 121; heme binding, oxyge 99.62
1io7_A 368 Cytochrome P450 CYP119; thermophilic, cytochromo P 99.62
3p3o_A 416 Cytochrome P450; monooxygenase, oxidoreductase; HE 99.6
2rfb_A 343 Cytochrome P450; heme, iron, metal-binding, monoox 99.58
2wiy_A 394 XPLA-heme, cytochrome P450-like protein XPLA; CYT- 99.58
4dnj_A 412 Putative cytochrome P450; oxidoreductase; HET: HEM 99.44
4dxy_A 417 Cytochrome P450, CYP101D2; cytochrome P450 mutant, 99.24
2yjn_B381 Erycii, DTDP-4-keto-6-deoxy-hexose 3,4-isomerase; 97.54
2diu_A96 KIAA0430 protein; structural genomics, RRM domain, 91.55
3lqv_A115 PRE-mRNA branch site protein P14; cysless mutant, 88.15
1s79_A103 Lupus LA protein; RRM, alpha/beta, RNA binding pro 86.83
1iqt_A75 AUF1, heterogeneous nuclear ribonucleoprotein D0; 85.69
2mss_A75 Protein (musashi1); RNA-binding domain, RNA bindin 82.6
2dnz_A95 Probable RNA-binding protein 23; RNA recognition m 82.29
4f25_A115 Polyadenylate-binding protein 1; RRM fold, transla 81.68
2krb_A81 Eukaryotic translation initiation factor 3 subunit 81.52
4fxv_A99 ELAV-like protein 1; RNA recognition motif, putati 80.29
>3swz_A Steroid 17-alpha-hydroxylase/17,20 lyase; cytochrome P450, CYP17A1, P450C17, P450 17A1, monooxyg 17A-hydroxylase, heme protein; HET: HEM TOK; 2.40A {Homo sapiens} PDB: 3ruk_A* Back     alignment and structure
Probab=100.00  E-value=9.4e-33  Score=253.27  Aligned_cols=261  Identities=21%  Similarity=0.313  Sum_probs=178.8

Q ss_pred             CCCCCCCCCCCCccccccccCCCC-cchHHHHHHHHHhCCeEEEeeCCeeEEEeCCHHHHHHHHHhcCccccCCCCcchh
Q 022341           29 KRFKLPPGPLPVPVFGNWLQVGDD-LNHRNLSDLAKKYGDVLLLRMGQRNLVVVSSPDHAKEVLHTQGVEFGSRTRNVVF  107 (298)
Q Consensus        29 ~~~~~ppGP~~~PiiGnl~~l~~~-~~~~~~~~~~~~yG~i~~~~~g~~~~vvi~~p~~i~evl~~~~~~f~~r~~~~~~  107 (298)
                      ++.++||||+++|++||++++... .++..+.+|+++||+||++++|+.++|||+||++++++|.+++..|++||.....
T Consensus         5 ~~~~~PPgP~~lPliGnl~~l~~~~~~~~~~~~~~~kYG~i~~~~~g~~~~vvv~~p~~~k~il~~~~~~f~~rp~~~~~   84 (494)
T 3swz_A            5 TGAKYPKSLLSLPLVGSLPFLPRHGHMHNNFFKLQKKYGPIYSVRMGTKTTVIVGHHQLAKEVLIKKGKDFSGRPQMATL   84 (494)
T ss_dssp             -------CCBCCCEEEEESSCTTSSCHHHHHHHTHHHHCSEEEEEETTEEEEEECSHHHHHHHHTTTTTTTBBCCCCHHH
T ss_pred             CCCCCCCCCCCCCeEcchHHhCCCCchhHHHHHHHHHcCCEEEEEeCCCCEEEECCHHHHHHHHHhCcHhhCCCCCcHHH
Confidence            445789999999999999998653 4678899999999999999999999999999999999999999999999976655


Q ss_pred             hhhccCCCceEEecCChhHHHHhhhhcccccch--HHHHhhHHHHHHHHHHHHHHHhcCcccccCChhhHH-HHHHHHHH
Q 022341          108 DIFTGKGQDMVFTVYGEHWRKMRRIMTVPFFTN--KVVQQQRFNWEDEAARVVEDVKKDPEAATNGIVLRR-RLQLMMYN  184 (298)
Q Consensus       108 ~~~~~~~~~~~~~~~g~~Wk~~Rk~~~~~~~~~--~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~-~~~~~~~~  184 (298)
                      +.+...+.+++++++|+.|+++||+++ +.|+.  .....+.+.++++++.+++.|.+..    +.++++. .+...+++
T Consensus        85 ~~~~~~~~gl~~~~~g~~wr~~Rr~~~-~~f~~~~~~~~~~~~~i~~~~~~l~~~l~~~~----~~~vd~~~~~~~~t~d  159 (494)
T 3swz_A           85 DIASNNRKGIAFADSGAHWQLHRRLAM-ATFALFKDGDQKLEKIICQEISTLCDMLATHN----GQSIDISFPVFVAVTN  159 (494)
T ss_dssp             HHHTTTTCSSSSSCSSHHHHHHHHHHH-HHTTTTSSSTTCHHHHHHHHHHHHHHHHHHTT----TEEECCHHHHHHHHHH
T ss_pred             HHhccCCCCeEeCCCCHHHHHHHHHHH-HHHHHhcchHHHHHHHHHHHHHHHHHHHHHcC----CCcccHHHHHHHHHHH
Confidence            554444556667778999999999875 55542  3356688899999999999997532    2345544 45556677


Q ss_pred             HHHHHHhccccCCCCchHHHHHHHHHHHHHhhhhccCCccccccccccccchhhHHHHHHHHHHHHHHHHHHHHHhcc--
Q 022341          185 NMYRIMFDRRFESQDDPLFNRLKALNGERSRLAQSFEYNYGDFIPILRPFLRGYLKICKEVKERRLQLFKDYFVEERN--  262 (298)
Q Consensus       185 ~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~--  262 (298)
                      +|++++||.+++.. ++....+....+.+.....  ...+.+++|+++.+.....+..... .+....+....+++++  
T Consensus       160 vi~~~~fG~~~~~~-~~~~~~~~~~~~~~~~~~~--~~~~~~~~P~l~~~p~~~~~~~~~~-~~~~~~~~~~~i~~~~~~  235 (494)
T 3swz_A          160 VISLICFNTSYKNG-DPELNVIQNYNEGIIDNLS--KDSLVDLVPWLKIFPNKTLEKLKSH-VKIRNDLLNKILENYKEK  235 (494)
T ss_dssp             HHHHHHHSCCCCTT-CTHHHHHHHHHHHHHHHHC--SSSSCCSSCGGGTSCCSHHHHHHHH-HHHHHHHHHHHHHHHTTT
T ss_pred             HHHHHHcCCcCCCC-CHHHHHHHHHHHHHHHhcc--cchHHHHHHHHHHcCcHHHHHHHHH-HHHHHHHHHHHHHHHHHh
Confidence            79999999988654 3333444433332222221  1234578888763322211211111 1223334444443321  


Q ss_pred             -----cCChHHHHHhhcc------------cCCCCHHHHHHHHHHHhhcccCC
Q 022341          263 -----LKCAIDHILDAQT------------KGEINEDNVLYIVENINVAGMFI  298 (298)
Q Consensus       263 -----~~d~ld~ll~~~~------------~~~~t~~~i~~~~~~l~~aG~~~  298 (298)
                           ..|+++.|+++..            ...+++++|...+.++++||+++
T Consensus       236 ~~~~~~~d~l~~ll~~~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~dT  288 (494)
T 3swz_A          236 FRSDSITNMLDTLMQAKMNSDNGNAGPDQDSELLSDNHILTTIGDIFGAGVET  288 (494)
T ss_dssp             CCTTCCCSHHHHHHHHHHTSCCC----CCSSGGGCHHHHHHHHHHHHHHHHHH
T ss_pred             hcccchhHHHHHHHHHHHhhhcccccccccccccCHHHHHHHHHHHhhcchhH
Confidence                 4699999997531            11489999999999999999864
>3e6i_A CYPIIE1, P450-J, cytochrome P450 2E1; CYP2E1, monooxygenase, acetaminophen, oxidoreductase, heme, endoplasmic reticulum, iron, membrane; HET: HEM; 2.20A {Homo sapiens} PDB: 3e4e_A* 3gph_A* 3koh_A* 3lc4_A* 3t3z_A* Back     alignment and structure
>3tbg_A Cytochrome P450 2D6; monooxygenase, thioridazine, oxidoreductase; HET: RTZ HEM; 2.10A {Homo sapiens} PDB: 3qm4_A* 2f9q_A* Back     alignment and structure
>3s79_A Cytochrome P450 19A1; oxidoreductase; HET: HEM ASD; 2.75A {Homo sapiens} PDB: 3eqm_A* 3s7s_A* 4gl5_A* 4gl7_A* Back     alignment and structure
>3pm0_A Cypib1, cytochrome P450 1B1; CYP1B1, monooxygenase, alpha-naphthoflavone, 17BETA-estradiol, oxidoreductase; HET: HEM BHF; 2.70A {Homo sapiens} Back     alignment and structure
>3qz1_A Steroid 21-hydroxylase; P450 monooxygenase, oxidoreductase; HET: HEM 3QZ; 3.00A {Bos taurus} Back     alignment and structure
>3nxu_A Cytochrome P450 3A4; alpha beta protein, cytochrome P450 fold, hemoprotein, monoo cytochrome P450 reductase, endoplasmic reticulum; HET: HEM RIT; 2.00A {Homo sapiens} SCOP: a.104.1.1 PDB: 1w0e_A* 1w0g_A* 2j0d_A* 2v0m_A* 1w0f_A* 1tqn_A* 3ua1_A* 3tjs_A* Back     alignment and structure
>1r9o_A Cytochrome P450 2C9; monooxygenase, drug metabolizing enzyme, oxidoreductas; HET: HEM FLP; 2.00A {Homo sapiens} SCOP: a.104.1.1 PDB: 1og5_A* 1og2_A* 2nnj_A* 1pq2_A* 2nni_A* 2nnh_A* 2vn0_A* 1nr6_A* 1dt6_A* 1n6b_A* Back     alignment and structure
>3czh_A Cytochrome P450 2R1; vitamin D, vitamin S 25-hydroxylase, drug metabolism, structural genomics, structural genomics consortium, SGC; HET: BCD HEM D2V; 2.30A {Homo sapiens} SCOP: a.104.1.1 PDB: 2ojd_A* 3c6g_A* 3dl9_A* Back     alignment and structure
>3k9v_A 1,25-dihydroxyvitamin D(3) 24-hydroxylase, mitochondrial; mitochondrial cytochrome P450, monotopic membrane protein, monooxygenase; HET: HEM CPS; 2.50A {Rattus norvegicus} PDB: 3k9y_A* Back     alignment and structure
>1po5_A Cytochrome P450 2B4; oxidoreductase, membrane protein, CYP 2B4, CYP LM2, cytochro monooxygenase; HET: HEM; 1.60A {Oryctolagus cuniculus} SCOP: a.104.1.1 PDB: 3mvr_A* 2bdm_A* 3g5n_A* 3g93_A* 3kw4_A* 3me6_A* 1suo_A* 3r1a_A* 3r1b_A* 2q6n_A* 3tk3_A* 3ibd_A* 3qoa_A* 3qu8_A* Back     alignment and structure
>2fdv_A Cytochrome P450 2A6; CYP2A6, monooxygenase, drug metabolizing enzyme, coumarin 7-hydroxylase, nicotine oxidase, oxidoreductase; HET: HEM D2G; 1.65A {Homo sapiens} PDB: 1z11_A* 1z10_A* 2fdu_A* 2fdw_A* 2fdy_A* 3t3r_A* 2pg5_A* 2pg7_A* 2pg6_A* 3t3q_A* 3ebs_A* 2p85_A* 3t3s_A* Back     alignment and structure
>2hi4_A Cytochrome P450 1A2; CYP1A2, monooxygenase, drug metabolizing enzyme, alpha-naphthoflavone, benzo(H)flavone, 7,8- benzoflavone, oxidoreductase; HET: HEM BHF; 1.95A {Homo sapiens} Back     alignment and structure
>3gw9_A Sterol 14alpha-demethylase; CYP51, cytochrome P450, heme, oxidoreductase, monooxygenase, sterol biosynthesis, lipids, endoplasmic reticulum; HET: HEM VNI; 1.87A {Trypanosoma brucei} PDB: 3tik_A* 3g1q_A* 3p99_A* 2wv2_A* 2x2n_A* 3khm_A* 3k1o_A* 3ksw_A* 2wx2_A* 2wuz_A* 3l4d_A* Back     alignment and structure
>3ld6_A Lanosterol 14-alpha demethylase; cytochrome P450, ketoconazole, S genomics, structural genomics consortium, SGC; HET: HEM KKK BCD; 2.80A {Homo sapiens} PDB: 3juv_A* 3jus_A* Back     alignment and structure
>2ij2_A Cytochrome P450 BM3; monoxygenase, heme binding protein, atomic resolution, oxidoreductase; HET: HEM; 1.20A {Bacillus megaterium} SCOP: a.104.1.1 PDB: 2hpd_A* 1fag_A* 1jpz_A* 1zo9_A* 1zo4_A* 1zoa_A* 3m4v_A* 3ekb_A* 3ben_A* 1fah_A* 2nnb_A* 3kx3_A* 3ekd_A* 3ekf_A* 1smi_A* 1smj_A* 3kx4_A* 2ij3_A* 2ij4_A* 3hf2_A* ... Back     alignment and structure
>3n9y_A Cholesterol SIDE-chain cleavage enzyme; cytochrome P450, cholesterol SIDE chain cleavage, structural genomics, structural genomics consortium, SGC; HET: HEM CLR; 2.10A {Homo sapiens} PDB: 3n9z_A* 3na1_A* 3na0_A* 3mzs_A* Back     alignment and structure
>2cib_A Cytochrome P450 51; heme, heme lipid synthesis, metal-binding, monooxygenase, NADP, oxidoreductase, protein-inhibitor complex; HET: HEM CM6; 1.50A {Mycobacterium tuberculosis} SCOP: a.104.1.1 PDB: 2bz9_A* 1x8v_A* 2ci0_A* 2vku_A* 2w09_A* 2w0b_A* 2w0a_A* 1h5z_A* 1ea1_A* 1e9x_A* 1u13_A* Back     alignment and structure
>2ve3_A Putative cytochrome P450 120; oxidoreductase, monooxygenase, metal-binding, heme, iron; HET: HEM REA; 2.10A {Synechocystis SP} PDB: 2ve4_A* Back     alignment and structure
>3dbg_A Putative cytochrome P450; cytochrome P450 oxidoreductase, CYP170A1, molecular mechanism, heme, iron, metal-binding, monooxygenase; HET: HEM; 2.60A {Streptomyces coelicolor A3} PDB: 3el3_A* Back     alignment and structure
>3v8d_A Cholesterol 7-alpha-monooxygenase; cytochrome, oxidoreductase; HET: HEM 0GV; 1.90A {Homo sapiens} PDB: 3sn5_A* 3dax_A* Back     alignment and structure
>2cd8_A Cytochrome P450 monooxygenase; oxidoreductase, PIKC, macrolide monooxygenase, antibiotic biosynthesis, heme, iron, metal-binding; HET: HEM PXI; 1.7A {Streptomyces venezuelae} PDB: 2c6h_A* 2bvj_A* 2ca0_A* 2c7x_A* 2vzm_A* 2vz7_A* 2vsj_A* 2wi9_A* 2whw_A* Back     alignment and structure
>1jfb_A Nitric-oxide reductase cytochrome P450 55A1; cytochrome P450NOR, atomic resolutio structural genomics/proteomics initiative, RSGI; HET: HEM; 1.00A {Fusarium oxysporum} SCOP: a.104.1.1 PDB: 1jfc_A* 1gej_A* 1ged_A* 1ehe_A* 1gei_A* 1rom_A* 2rom_A* 1ehf_A* 1cl6_A* 1ehg_A* 1cmj_A* 1f25_A* 1f24_A* 1xqd_A* 1f26_A* 1cmn_A* 1ulw_A* Back     alignment and structure
>3dax_A Cytochrome P450 7A1; cholesterol, cholesterol 7-alpha hydroxylase, structural genomics, structural genomics consortium, SGC, cholesterol metabolism; HET: HEM; 2.15A {Homo sapiens} PDB: 3sn5_A* Back     alignment and structure
>3mdm_A Cholesterol 24-hydroxylase; CYP46A1, P450 46A1, thioperamide, monooxygenase, metab enzyme, oxidoreductase, heme, cholesterol metabolism; HET: HEM FJZ; 1.60A {Homo sapiens} PDB: 2q9g_A* 2q9f_A* 3mdr_A* 3mdt_A* 3mdv_A* 4enh_A* 4fia_A* Back     alignment and structure
>1cpt_A Cytochrome P450-TERP; oxidoreductase(oxygenase); HET: HEM; 2.30A {Pseudomonas SP} SCOP: a.104.1.1 Back     alignment and structure
>3b6h_A Prostacyclin synthase; enzyme-inhibitor complex, CYP8A1, cytochrome P450, endoplasmic reticulum, fatty acid biosynthesis, heme, iron, isomerase; HET: BOG MXD HEM; 1.62A {Homo sapiens} PDB: 2iag_A* Back     alignment and structure
>1n97_A CYP175A1; electron transport; HET: SRT HEM; 1.80A {Thermus thermophilus} SCOP: a.104.1.1 PDB: 1wiy_A* Back     alignment and structure
>1ued_A P450 OXYC, P450 monooxygenase; cytochrome P450 vancomycin biosynthesis, oxidoreductase; HET: HEM PG4; 1.90A {Amycolatopsis orientalis} SCOP: a.104.1.1 Back     alignment and structure
>3b98_A Prostaglandin I2 synthase; prostacyclin synthase, cytochrome P450 8A1, CYP8A1, isomerase; HET: HEM; 2.08A {Danio rerio} PDB: 3b99_A* Back     alignment and structure
>2zbx_A Cytochrome P450-SU1; beta prism, heme, iron, metal-binding, monooxygenase, oxidoreductase; HET: HEM; 1.50A {Streptomyces griseolus} PDB: 2zby_A* 2zbz_A* 3cv8_A* 3cv9_A* Back     alignment and structure
>3ivy_A Cytochrome P450 CYP125; cholesterol, monooxygenase, H iron, metal-binding, oxidoreductase; HET: HEM; 1.35A {Mycobacterium tuberculosis} PDB: 3iw0_A* 3iw1_A* 3iw2_A* 2x5w_A* 2x5l_A* 2xc3_A* 2xn8_A* Back     alignment and structure
>2zwu_A Camphor 5-monooxygenase; P450CAM, camphor-hydroxylase, heme, iron, metal-binding, oxidoreductase, substrate-soaking, cytoplasm; HET: HEM CAM; 1.30A {Pseudomonas putida} PDB: 1gem_A* 1iwi_A* 2l8m_A* 2z97_A* 1gek_A* 2zax_A* 2zaw_A* 2zwt_A* 1rf9_A* 1lwl_A* 1iwk_A* 1iwj_A* 2zui_A* 2fe6_A* 1geb_A* 1yrc_A* 1noo_A* 1cp4_A* 1pha_A* 1phc_A* ... Back     alignment and structure
>1izo_A P450bsbeta, cytochrome P450 152A1; heme protein, protein-fatty acid complex, riken structural genomics/proteomics initiative, RSGI; HET: HEM PAM; 2.10A {Bacillus subtilis} SCOP: a.104.1.1 PDB: 2zqj_A* 2zqx_A* Back     alignment and structure
>3awm_A Fatty acid alpha-hydroxylase; cytochrome P450, peroxygenase, oxidoreductase; HET: HEM PLM; 1.65A {Sphingomonas paucimobilis} PDB: 3awq_A* 3awp_A* Back     alignment and structure
>3oo3_A OXY protein; cytochrome P450, monooxygenase, PCD-teicoplanin aglycone, oxidoreductase; HET: HEM; 2.20A {Actinoplanes teichomyceticus} SCOP: a.104.1.0 PDB: 3o1a_A* Back     alignment and structure
>3ejb_B Biotin biosynthesis cytochrome P450-like enzyme; protein-protein complex, cytochrome P450 fold, carrier protein, 4-helix bundle, cytoplasm; HET: ZMP HTG HEM; 2.00A {Bacillus subtilis} SCOP: a.104.1.0 PDB: 3ejd_B* 3eje_B* Back     alignment and structure
>1s1f_A Putative cytochrome P450; cytochrome P450 oxidoreductase, CYP158A2, anti biosynthesis, oxidoreductase; HET: HEM PIM; 1.50A {Streptomyces coelicolor} SCOP: a.104.1.1 PDB: 1se6_A* 2d0e_A* 1t93_A* 2d09_A* 3tzo_A* Back     alignment and structure
>3aba_A Cytochrome P450; oxidoreductase, heme, monooxygenase, macrolide, filipi metal-binding, oxidoreductase-antibiotic complex; HET: HEM FLI; 1.80A {Streptomyces avermitilis} PDB: 3e5j_A* 3e5k_A* 3e5l_A* Back     alignment and structure
>3abb_A CYP105D6, cytochrome P450 hydroxylase; oxidoreductase, heme, monooxygenase, macrolide, filipi metal-binding; HET: HEM; 2.30A {Streptomyces avermitilis} Back     alignment and structure
>3dsk_A Cytochrome P450 74A, chloroplast; P450 fold, fatty acid biosynthesis, heme, iron, synthesis, lyase, metal-binding, oxylipin biosynthesis; HET: HEM T25; 1.55A {Arabidopsis thaliana} PDB: 2rcm_A* 3dsj_A* 3dsi_A* 2rcl_A* 2rch_A* 3cli_A* Back     alignment and structure
>3tkt_A Cytochrome P450; aromatic hydrocarbon binding of P450 E oxidoreductase; HET: HEM; 2.20A {Novosphingobium aromaticivorans} Back     alignment and structure
>2wm5_A CYP124, putative cytochrome P450 124; metal-binding, oxidoreductase, omega-hydroxylation, iron, heme, fatty acid, monooxygenase; HET: HEM; 1.50A {Mycobacterium tuberculosis} PDB: 2wm4_A* Back     alignment and structure
>2jjn_A Cytochrome P450 113A1; oxidoreductase, iron, heme, monooxygenase, metal-binding, AN biosynthesis, TIE-ROD mechanism of action; HET: HEM; 1.59A {Saccharopolyspora erythraea} PDB: 2jjo_A* 2jjp_A* 2xfh_A* 2wio_A* 2vrv_A* Back     alignment and structure
>2z3t_A Cytochrome P450; monoxygenase, oxydoreductase, heme-enzyme, oxidoreductase; HET: HEM; 1.90A {Streptomyces SP} PDB: 2z3u_A* 3a1l_A* Back     alignment and structure
>3tyw_A Putative cytochrome P450; P450 monooxygenase, oxidoreductase; HET: HEM; 2.90A {Streptomyces coelicolor} PDB: 4fxb_A* Back     alignment and structure
>4fb2_A P450CIN; heme, monooxygenase, cindoxin, oxidoreductase; HET: HEM EDO; 1.37A {Citrobacter braakii} PDB: 4fmx_A* 4fyz_A* 1t2b_A* 3bdz_A* 3be0_A* Back     alignment and structure
>1odo_A Putative cytochrome P450 154A1; P450 monooxygenase, oxidoreductase; HET: HEM PIM; 1.85A {Streptomyces coelicolor} SCOP: a.104.1.1 Back     alignment and structure
>3lxh_A Cytochrome P450; heme, iron, metal-binding, monooxygena oxidoreductase; HET: HEM; 2.20A {Novosphingobium aromaticivorans} SCOP: a.104.1.0 PDB: 3lxi_A* Back     alignment and structure
>3a4g_A Vitamin D hydroxylase; cytochrome P450, hemoprotein, monoox oxidoreductase; HET: HEM; 1.75A {Pseudonocardia autotrophica} PDB: 3a4h_A* 3a51_A* 3a4z_A* 3a50_A* Back     alignment and structure
>3r9b_A Cytochrome P450 164A2; monooxygenase, oxidoreductase; HET: HEM D12; 1.89A {Mycobacterium smegmatis} PDB: 3r9c_A* Back     alignment and structure
>2z36_A MOXA, cytochrome P450 type compactin 3'',4''- hydroxylase; CYP105, oxidoreductase; HET: HEM MES; 2.80A {Nonomuraea recticatena} Back     alignment and structure
>1q5d_A P450 epoxidase; cytochrome P450, epothilone, oxydoreductase, heme-enzyme, oxidoreductase; HET: HEM EPB; 1.93A {Sorangium cellulosum} SCOP: a.104.1.1 PDB: 1q5e_A* 1pkf_A* Back     alignment and structure
>2xkr_A CYP142, putative cytochrome P450 142; oxidoreductase; HET: HEM; 1.60A {Mycobacterium tuberculosis} Back     alignment and structure
>1z8o_A 6-deoxyerythronolide B hydroxylase; heme, CYP, erythromycin, oxidoreductase; HET: HEM DEB; 1.70A {Saccharopolyspora erythraea} SCOP: a.104.1.1 PDB: 1z8p_A* 1z8q_A* 1jio_A* 1jip_A* 1eup_A* 1egy_A* 1jin_A* 1oxa_A* Back     alignment and structure
>2y5n_A MYCG, P-450-like protein; oxidoreductase, mycinamicin biosynthesis; HET: HEM MYV; 1.62A {Micromonospora griseorubida} PDB: 2y46_A* 2y5z_A* 2y98_A* 2yca_A* 2ygx_A* Back     alignment and structure
>1gwi_A CYP154C1, cytochrome P450 154C1; oxidoreductase, macrolide antibiotics, 12- and 14- carbon macrolactone monooxygenase, heme; HET: HEM; 1.92A {Streptomyces coelicolor} SCOP: a.104.1.1 Back     alignment and structure
>2uuq_A CYP130, cytochrome P450 130; iron, heme, monooxygenase, metal-binding, oxidoreductase, hypothetical protein; HET: HEM; 1.46A {Mycobacterium tuberculosis} PDB: 2uvn_A* 2whf_A* 2wh8_A* 2wgy_A* Back     alignment and structure
>3dan_A Cytochrome P450 74A2; AOS heme cytochrome P450 structure, fatty acid biosynthesis, heme, iron, lipid synthesis, lyase, metal-binding; HET: HEM; 1.80A {Parthenium argentatum} PDB: 3dam_A* 3dbm_A* Back     alignment and structure
>3oft_A Cytochrome P450, CYP101C1; oxidoreductase; HET: HEM; 1.90A {Novosphingobium aromaticivorans} PDB: 3ofu_A* Back     alignment and structure
>3buj_A CALO2; heme, iron, metal-binding, monooxygenase, oxidoreducta binding protein; HET: HEM; 2.47A {Micromonospora echinospora} Back     alignment and structure
>3nc3_A Cytochrome P450 CYPX; cytochrome P450 oxidase, HAEM protein, oxidoreductase; HET: HEM; 2.66A {Bacillus subtilis} PDB: 3nc5_A* 3nc6_A* 3nc7_A* Back     alignment and structure
>3mgx_A Putative P450 monooxygenase; cytochrome P450 oxidase, HAEM protein, vancomycin biosynthes carrier protein, oxidoreductase; HET: HEM; 2.10A {Amycolatopsis balhimycina} Back     alignment and structure
>2xbk_A PIMD protein; epoxidation, oxidoreductase; HET: HEM XBK; 1.95A {Streptomyces natalensis} PDB: 2x9p_A* Back     alignment and structure
>1lfk_A OXYB, P450 monooxygenase; oxidative phenol coupling reaction P450 vancomycin, oxidoreductase; HET: HEM; 1.70A {Amycolatopsis orientalis} SCOP: a.104.1.1 PDB: 1lg9_A* 1lgf_A* Back     alignment and structure
>2dkk_A Cytochrome P450; CYP158A1, INHI oxidoreductase; HET: HEM; 1.97A {Streptomyces coelicolor} PDB: 2nz5_A* 2nza_A* Back     alignment and structure
>3rwl_A Cytochrome P450 alkane hydroxylase 1 CYP153A7; P450 monooxygenase, oxidoreductase; HET: HEM; 2.00A {Sphingopyxis macrogoltabida} Back     alignment and structure
>3b4x_A 367AA long hypothetical cytochrome P450; HEM protein, heme, iron, metal-binding, monooxygenase, oxidoreductase; HET: HEM; 1.94A {Sulfolobus tokodaii} PDB: 1ue8_A* Back     alignment and structure
>1n40_A P450 MT2, cytochrome P450 121; heme binding, oxygen binding, P450 fold, structural genomics, PSI, protein structure initiative; HET: HEM; 1.06A {Mycobacterium tuberculosis} SCOP: a.104.1.1 PDB: 1n4g_A* 2ij5_A* 2ij7_A* 3g5f_A* 3g5h_A* 3cy0_A* 3cy1_A* 3cxv_A* 3cxx_A* 3cxz_A* 3cxy_A* Back     alignment and structure
>1io7_A Cytochrome P450 CYP119; thermophilic, cytochromo P450, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: HEM; 1.50A {Sulfolobus solfataricus} SCOP: a.104.1.1 PDB: 1f4u_A* 1f4t_A* 1io9_A* 1io8_A* Back     alignment and structure
>3p3o_A Cytochrome P450; monooxygenase, oxidoreductase; HET: HEM; 1.54A {Streptomyces thioluteus} PDB: 3p3x_A* 3p3z_A* 3p3l_A* Back     alignment and structure
>2rfb_A Cytochrome P450; heme, iron, metal-binding, monooxygenase, oxidoreductase; HET: HEM; 2.50A {Picrophilus torridus} PDB: 2rfc_A* Back     alignment and structure
>2wiy_A XPLA-heme, cytochrome P450-like protein XPLA; CYT-P450, RDX, bioremediation, electron transport; HET: HEM; 1.49A {Rhodococcus} PDB: 2wiv_A* Back     alignment and structure
>4dnj_A Putative cytochrome P450; oxidoreductase; HET: HEM ANN; 1.80A {Rhodopseudomonas palustris} PDB: 2fr7_A* 4do1_A* 4dnz_A* Back     alignment and structure
>4dxy_A Cytochrome P450, CYP101D2; cytochrome P450 mutant, HAEM-dependent, mono-oxygenases, oxidoreductase; HET: HEM; 2.00A {Novosphingobium aromaticivorans} PDB: 3nv6_A* 3nv5_A* Back     alignment and structure
>2yjn_B Erycii, DTDP-4-keto-6-deoxy-hexose 3,4-isomerase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea} Back     alignment and structure
>2diu_A KIAA0430 protein; structural genomics, RRM domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Back     alignment and structure
>3lqv_A PRE-mRNA branch site protein P14; cysless mutant, PRE-mRNA splicing, adenine, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: ADE; 2.38A {Homo sapiens} SCOP: d.58.7.1 PDB: 2f9d_A 2f9j_A 2fho_B Back     alignment and structure
>1s79_A Lupus LA protein; RRM, alpha/beta, RNA binding protein, translation; NMR {Homo sapiens} SCOP: d.58.7.1 Back     alignment and structure
>1iqt_A AUF1, heterogeneous nuclear ribonucleoprotein D0; RNA-binding protein, hnRNP, telomere, DNA-binding protein, RNA binding protein; NMR {Homo sapiens} SCOP: d.58.7.1 PDB: 1wtb_A 1x0f_A Back     alignment and structure
>2mss_A Protein (musashi1); RNA-binding domain, RNA binding protein; NMR {Mus musculus} SCOP: d.58.7.1 PDB: 2mst_A Back     alignment and structure
>2dnz_A Probable RNA-binding protein 23; RNA recognition motif, RRM, RNA binding domain, RBD, RNP, structural genomics, NPPSFA; NMR {Homo sapiens} Back     alignment and structure
>4f25_A Polyadenylate-binding protein 1; RRM fold, translation initiation, RNA-binding, EIF4G-binding translation; 1.90A {Homo sapiens} PDB: 4f26_A 2k8g_A Back     alignment and structure
>2krb_A Eukaryotic translation initiation factor 3 subunit B; EIF3, eukaryotic initiation factor, EIF3B, EIF3J; NMR {Homo sapiens} Back     alignment and structure
>4fxv_A ELAV-like protein 1; RNA recognition motif, putative RNA-binding domain, transcri structural genomics, joint center for structural genomics; 1.90A {Homo sapiens} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 298
d1po5a_ 465 a.104.1.1 (A:) Mammalian cytochrome p450 2b4 {Rabb 1e-35
d1r9oa_ 467 a.104.1.1 (A:) Mammalian cytochrome p450 2c9 {Huma 6e-34
d3czha1 463 a.104.1.1 (A:40-502) Vitamin D 25-hydroxylase Cyp2 4e-32
d1tqna_ 472 a.104.1.1 (A:) Mammalian cytochrome P450 3a4 {Huma 8e-29
d2ij2a1 453 a.104.1.1 (A:3-455) Cytochrome P450 bm-3 {Bacillus 3e-28
d2ciba1 445 a.104.1.1 (A:5-449) Cytochrome p450 14 alpha-stero 4e-22
d1izoa_ 411 a.104.1.1 (A:) Cytochrome p450 152a1 (Bs-beta) {Ba 2e-16
d1n97a_ 385 a.104.1.1 (A:) Cyp175a1 {Thermus thermophilus [Tax 3e-15
d1odoa_ 401 a.104.1.1 (A:) Cyp154a1 monooxygenase {Streptomyce 4e-10
d1ueda_ 403 a.104.1.1 (A:) p450 monoxygenase OxyC {Amycolatops 6e-06
>d1po5a_ a.104.1.1 (A:) Mammalian cytochrome p450 2b4 {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 465 Back     information, alignment and structure

class: All alpha proteins
fold: Cytochrome P450
superfamily: Cytochrome P450
family: Cytochrome P450
domain: Mammalian cytochrome p450 2b4
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

 Score =  131 bits (330), Expect = 1e-35
 Identities = 67/278 (24%), Positives = 110/278 (39%), Gaps = 17/278 (6%)

Query: 32  KLPPGPLPVPVFGNWLQVGDDLNHRNLSDLAKKYGDVLLLRMGQRNLVVVSSPDHAKEVL 91
           KLPPGP P+PV GN LQ+      R+   L +KYGDV  + +G R +VV+   D  +E L
Sbjct: 2   KLPPGPSPLPVLGNLLQMDRKGLLRSFLRLREKYGDVFTVYLGSRPVVVLCGTDAIREAL 61

Query: 92  HTQGVEFGSRTRNVVFD-IFTGKGQDMVFTVYGEHWRKMRRIMTVPFFTNKVVQQQRFNW 150
             Q   F  R +  V D IF G G   V    GE WR +RR          + ++     
Sbjct: 62  VDQAEAFSGRGKIAVVDPIFQGYG---VIFANGERWRALRRFSLATMRDFGMGKRSVEER 118

Query: 151 EDEAARVVEDVKKDPEAATNGIVLRRRLQLMMYNNMYRIMFDRRFESQDDPLFNRLKALN 210
             E AR + +  +  + A   +        +  N +  I+F +RF+ +D      L    
Sbjct: 119 IQEEARCLVEELRKSKGAL--LDNTLLFHSITSNIICSIVFGKRFDYKDPVFLRLLDLFF 176

Query: 211 GERSRLAQSFEYNYGDFIPILRPFLRGYLKICK-----------EVKERRLQLFKDYFVE 259
              S ++      +  F   L+ F   + +I +            V++ R  L      +
Sbjct: 177 QSFSLISSFSSQVFELFSGFLKHFPGTHRQIYRNLQEINTFIGQSVEKHRATLDPSNPRD 236

Query: 260 ERNLKCAIDHILDAQTKGEINEDNVLYIVENINVAGMF 297
             ++         +    E +  N++  V ++  AG  
Sbjct: 237 FIDVYLLRMEKDKSDPSSEFHHQNLILTVLSLFFAGTE 274
>d1r9oa_ a.104.1.1 (A:) Mammalian cytochrome p450 2c9 {Human (Homo sapiens) [TaxId: 9606]} Length = 467 Back     information, alignment and structure
>d3czha1 a.104.1.1 (A:40-502) Vitamin D 25-hydroxylase Cyp2R1 {Human (Homo sapiens) [TaxId: 9606]} Length = 463 Back     information, alignment and structure
>d1tqna_ a.104.1.1 (A:) Mammalian cytochrome P450 3a4 {Human (Homo sapiens) [TaxId: 9606]} Length = 472 Back     information, alignment and structure
>d2ij2a1 a.104.1.1 (A:3-455) Cytochrome P450 bm-3 {Bacillus megaterium [TaxId: 1404]} Length = 453 Back     information, alignment and structure
>d2ciba1 a.104.1.1 (A:5-449) Cytochrome p450 14 alpha-sterol demethylase (cyp51) {Mycobacterium tuberculosis [TaxId: 1773]} Length = 445 Back     information, alignment and structure
>d1izoa_ a.104.1.1 (A:) Cytochrome p450 152a1 (Bs-beta) {Bacillus subtilis [TaxId: 1423]} Length = 411 Back     information, alignment and structure
>d1n97a_ a.104.1.1 (A:) Cyp175a1 {Thermus thermophilus [TaxId: 274]} Length = 385 Back     information, alignment and structure
>d1odoa_ a.104.1.1 (A:) Cyp154a1 monooxygenase {Streptomyces coelicolor [TaxId: 1902]} Length = 401 Back     information, alignment and structure
>d1ueda_ a.104.1.1 (A:) p450 monoxygenase OxyC {Amycolatopsis orientalis [TaxId: 31958]} Length = 403 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query298
d2ij2a1 453 Cytochrome P450 bm-3 {Bacillus megaterium [TaxId: 99.97
d1r9oa_ 467 Mammalian cytochrome p450 2c9 {Human (Homo sapiens 99.95
d1tqna_ 472 Mammalian cytochrome P450 3a4 {Human (Homo sapiens 99.94
d2ciba1 445 Cytochrome p450 14 alpha-sterol demethylase (cyp51 99.94
d3czha1 463 Vitamin D 25-hydroxylase Cyp2R1 {Human (Homo sapie 99.92
d1po5a_ 465 Mammalian cytochrome p450 2b4 {Rabbit (Oryctolagus 99.92
d1n97a_ 385 Cyp175a1 {Thermus thermophilus [TaxId: 274]} 99.78
d1izoa_ 411 Cytochrome p450 152a1 (Bs-beta) {Bacillus subtilis 99.75
d1odoa_ 401 Cyp154a1 monooxygenase {Streptomyces coelicolor [T 99.64
d1ueda_ 403 p450 monoxygenase OxyC {Amycolatopsis orientalis [ 99.6
d1z8oa1 402 Cytochrome P450-ERYF {Saccharopolyspora erythraea 99.59
d1jfba_ 399 Cytochrome P450-NOR, nitric reductase {Fungus (Fus 99.44
d1gwia_ 403 Cyp154c1 monooxygenase {Streptomyces coelicolor [T 99.42
d1q5da_ 401 Cytochrome P450epok {Sorangium cellulosum [TaxId: 99.42
d1re9a_ 404 Cytochrome P450-CAM {Pseudomonas putida [TaxId: 30 99.34
d1cpta_ 428 Cytochrome P450-TERP {Pseudomonas sp. [TaxId: 306] 99.23
d1s1fa_ 399 Cyp158a2 {Streptomyces coelicolor [TaxId: 1902]} 99.18
d1lfka_ 394 p450 monoxygenase OxyB {Amycolatopsis orientalis [ 99.15
d1io7a_ 366 Cyp119 {Archaeon Sulfolobus solfataricus [TaxId: 2 99.08
d1n40a_ 395 Cyp121 monooxygenase (P450 Mt2) {Mycobacterium tub 98.91
d1ue8a_ 367 Cyp119 {Archaeon Sulfolobus tokodaii [TaxId: 11195 98.52
d2f9da1114 Pre-mRNA branch site protein p14 {Human (Homo sapi 90.66
d1whxa_111 Probable RNA-binding protein 19, Rbm19 {Mouse (Mus 88.58
d1hd0a_75 Heterogeneous nuclear ribonucleoprotein d0 {Human 87.91
d3begb187 Splicing factor, arginine/serine-rich 1, SFRS1 {Hu 87.68
d1no8a_78 Nuclear factor Aly {Mouse (Mus musculus) [TaxId: 1 86.29
d1whwa_99 Probable RNA-binding protein 19, Rbm19 {Mouse (Mus 85.39
d1l3ka184 Nuclear ribonucleoprotein A1 (RNP A1, UP1) {Human 84.23
d2ghpa275 U4/U6 snRNA-associated-splicing factor PRP24 {Bake 84.15
d1l3ka279 Nuclear ribonucleoprotein A1 (RNP A1, UP1) {Human 83.49
d1wg4a_98 Splicing factor, arginine/serine-rich 9 (SFRS9) {M 82.57
d2msta_75 Neural RNA-binding protein Musashi-1 {Mouse (Mus m 82.54
d2cpha194 Probable RNA-binding protein 19, Rbm19 {Mouse (Mus 81.81
d1x0fa175 Nuclear ribonucleoprotein D0 (AUF1) {Human (Homo s 81.78
d1p1ta_104 Cleavage stimulation factor, 64 kda subunit {Human 81.63
d1x5ua193 Splicing factor 3B subunit 4 {Human (Homo sapiens) 81.2
d1fxla285 Hu antigen D (Hud) {Human (Homo sapiens) [TaxId: 9 81.05
d1zh5a285 Lupus LA protein {Human (Homo sapiens) [TaxId: 960 81.02
d1uawa_77 Musashi-1 {Mouse (Mus musculus) [TaxId: 10090]} 80.57
d2cqca183 Arginine/serine-rich splicing factor 10 {Human (Ho 80.53
>d2ij2a1 a.104.1.1 (A:3-455) Cytochrome P450 bm-3 {Bacillus megaterium [TaxId: 1404]} Back     information, alignment and structure
class: All alpha proteins
fold: Cytochrome P450
superfamily: Cytochrome P450
family: Cytochrome P450
domain: Cytochrome P450 bm-3
species: Bacillus megaterium [TaxId: 1404]

Probab=99.97  E-value=3.9e-29  Score=224.46  Aligned_cols=252  Identities=15%  Similarity=0.179  Sum_probs=170.4

Q ss_pred             CCCCCCCccccccccCCCCcchHHHHHHHHHhCCeEEEeeCCeeEEEeCCHHHHHHHHHhcCccccCCCCcchhhhhccC
Q 022341           34 PPGPLPVPVFGNWLQVGDDLNHRNLSDLAKKYGDVLLLRMGQRNLVVVSSPDHAKEVLHTQGVEFGSRTRNVVFDIFTGK  113 (298)
Q Consensus        34 ppGP~~~PiiGnl~~l~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvi~~p~~i~evl~~~~~~f~~r~~~~~~~~~~~~  113 (298)
                      +|||+++|++||++++..++++..+.+|+++|||||++++|+.++|+|+||++|++++.++...++.++.......+.|.
T Consensus         3 iPGP~~~p~lG~l~~l~~~~~~~~~~~~~~kyG~if~~~~~~~~~vvl~~~~~i~~v~~~~~~~~~~~~~~~~~~~~~g~   82 (453)
T d2ij2a1           3 MPQPKTFGELKNLPLLNTDKPVQALMKIADELGEIFKFEAPGRVTRYLSSQRLIKEACDESRFDKNLSQALKFVRDFAGD   82 (453)
T ss_dssp             CCCCCCCGGGTTGGGGCSSCHHHHHHHHHHHHCSEEEEEETTEEEEEECCHHHHHHHTCTTTEEECCCHHHHHHHHHHTT
T ss_pred             CccCCCcchhhCHHHhCCCCHHHHHHHHHHHhCCEEEEEeCCceEEEECCHHHHHHHHhcCCcccccccHhHHHHHhcCC
Confidence            59999999999999998777888999999999999999999999999999999999998877776665544444556665


Q ss_pred             CCceEE-ecCChhHHHHhhhhcccccchHHHHhhHHHHHHHHHHHHHHHhcCcccccCChhhHHHHH-HHHHHHHHHHHh
Q 022341          114 GQDMVF-TVYGEHWRKMRRIMTVPFFTNKVVQQQRFNWEDEAARVVEDVKKDPEAATNGIVLRRRLQ-LMMYNNMYRIMF  191 (298)
Q Consensus       114 ~~~~~~-~~~g~~Wk~~Rk~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~-~~~~~~i~~~~f  191 (298)
                      +  ++. ..+|+.|+++||++. +.|+++.++.|.+.++++++.+++.|.+..+   ++++++.+.. ..+++.+++++|
T Consensus        83 ~--~~~~~~~g~~wk~~Rk~l~-~~fs~~~l~~~~~~i~~~~~~li~~l~~~~~---~~~idl~~~~~~~~~~~i~~~~f  156 (453)
T d2ij2a1          83 G--LFTSWTHEKNWKKAHNILL-PSFSQQAMKGYHAMMVDIAVQLVQKWERLNA---DEHIEVPEDMTRLTLDTIGLCGF  156 (453)
T ss_dssp             S--GGGSCTTSHHHHHHHHHHG-GGGSTTTHHHHHHHHHHHHHHHHHHHHTCCT---TCCEEHHHHHHHHHHHHHHHHHH
T ss_pred             c--EEecCCChHHHHHHHHHHH-HHhhhhhhhhhhhhHHHHHHHHHHHhhhcCC---CCccchHHHHHHHhhhcchhccc
Confidence            4  222 357999999999874 7888888899999999999999999976432   3456665544 445566999999


Q ss_pred             ccccCCCC-chHHHHHHHHHHHHHhhhhccCCccccccccccccchhhHHHHHHHHHHHHHHHHHHHHHh-----cccCC
Q 022341          192 DRRFESQD-DPLFNRLKALNGERSRLAQSFEYNYGDFIPILRPFLRGYLKICKEVKERRLQLFKDYFVEE-----RNLKC  265 (298)
Q Consensus       192 G~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~-----~~~~d  265 (298)
                      |.++++.. +.....+..+...+.......    ..+.|++..+... .+...+. .+.++.+....+++     ....|
T Consensus       157 G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~-~~~~~~~-~~~~~~~~~~~i~~r~~~~~~~~d  230 (453)
T d2ij2a1         157 NYRFNSFYRDQPHPFITSMVRALDEAMNKL----QRANPDDPAYDEN-KRQFQED-IKVMNDLVDKIIADRKASGEQSDD  230 (453)
T ss_dssp             SCCCCGGGCSSCCHHHHHHHHHHHHHHHTC-------CTTSGGGHHH-HHHHHHH-HHHHHHHHHHHHHHHHHHCCCCSS
T ss_pred             ccccchhhhccchHHHHhhhhccchhhhhh----hhcccccccchhh-HHHHHHH-HHHHHHHHHHHHhhhccccccccc
Confidence            99875321 111112222222222222211    1122222111111 1111111 12233333333332     23679


Q ss_pred             hHHHHHhhccc---CCCCHHHHHHHHHHHhhcccC
Q 022341          266 AIDHILDAQTK---GEINEDNVLYIVENINVAGMF  297 (298)
Q Consensus       266 ~ld~ll~~~~~---~~~t~~~i~~~~~~l~~aG~~  297 (298)
                      +++.+++..++   +.++++++...+.++++||++
T Consensus       231 ~l~~ll~~~~~~~~~~ls~~ei~~~~~~~l~ag~~  265 (453)
T d2ij2a1         231 LLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHE  265 (453)
T ss_dssp             HHHHHHHCCCTTTCCCCCHHHHHHHHHHHHHHHHH
T ss_pred             hhhhhhhhcccccCcchhhhHHHhhhccccccccc
Confidence            99999976432   369999999999999999975
>d1r9oa_ a.104.1.1 (A:) Mammalian cytochrome p450 2c9 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1tqna_ a.104.1.1 (A:) Mammalian cytochrome P450 3a4 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2ciba1 a.104.1.1 (A:5-449) Cytochrome p450 14 alpha-sterol demethylase (cyp51) {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure
>d3czha1 a.104.1.1 (A:40-502) Vitamin D 25-hydroxylase Cyp2R1 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1po5a_ a.104.1.1 (A:) Mammalian cytochrome p450 2b4 {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Back     information, alignment and structure
>d1n97a_ a.104.1.1 (A:) Cyp175a1 {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1izoa_ a.104.1.1 (A:) Cytochrome p450 152a1 (Bs-beta) {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1odoa_ a.104.1.1 (A:) Cyp154a1 monooxygenase {Streptomyces coelicolor [TaxId: 1902]} Back     information, alignment and structure
>d1ueda_ a.104.1.1 (A:) p450 monoxygenase OxyC {Amycolatopsis orientalis [TaxId: 31958]} Back     information, alignment and structure
>d1z8oa1 a.104.1.1 (A:3-404) Cytochrome P450-ERYF {Saccharopolyspora erythraea [TaxId: 1836]} Back     information, alignment and structure
>d1jfba_ a.104.1.1 (A:) Cytochrome P450-NOR, nitric reductase {Fungus (Fusarium oxysporum) [TaxId: 5507]} Back     information, alignment and structure
>d1gwia_ a.104.1.1 (A:) Cyp154c1 monooxygenase {Streptomyces coelicolor [TaxId: 1902]} Back     information, alignment and structure
>d1q5da_ a.104.1.1 (A:) Cytochrome P450epok {Sorangium cellulosum [TaxId: 56]} Back     information, alignment and structure
>d1re9a_ a.104.1.1 (A:) Cytochrome P450-CAM {Pseudomonas putida [TaxId: 303]} Back     information, alignment and structure
>d1cpta_ a.104.1.1 (A:) Cytochrome P450-TERP {Pseudomonas sp. [TaxId: 306]} Back     information, alignment and structure
>d1s1fa_ a.104.1.1 (A:) Cyp158a2 {Streptomyces coelicolor [TaxId: 1902]} Back     information, alignment and structure
>d1lfka_ a.104.1.1 (A:) p450 monoxygenase OxyB {Amycolatopsis orientalis [TaxId: 31958]} Back     information, alignment and structure
>d1io7a_ a.104.1.1 (A:) Cyp119 {Archaeon Sulfolobus solfataricus [TaxId: 2287]} Back     information, alignment and structure
>d1n40a_ a.104.1.1 (A:) Cyp121 monooxygenase (P450 Mt2) {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure
>d1ue8a_ a.104.1.1 (A:) Cyp119 {Archaeon Sulfolobus tokodaii [TaxId: 111955]} Back     information, alignment and structure
>d2f9da1 d.58.7.1 (A:12-125) Pre-mRNA branch site protein p14 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1whxa_ d.58.7.1 (A:) Probable RNA-binding protein 19, Rbm19 {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1hd0a_ d.58.7.1 (A:) Heterogeneous nuclear ribonucleoprotein d0 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d3begb1 d.58.7.1 (B:121-207) Splicing factor, arginine/serine-rich 1, SFRS1 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1no8a_ d.58.7.1 (A:) Nuclear factor Aly {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1whwa_ d.58.7.1 (A:) Probable RNA-binding protein 19, Rbm19 {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1l3ka1 d.58.7.1 (A:8-91) Nuclear ribonucleoprotein A1 (RNP A1, UP1) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2ghpa2 d.58.7.1 (A:41-115) U4/U6 snRNA-associated-splicing factor PRP24 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1l3ka2 d.58.7.1 (A:103-181) Nuclear ribonucleoprotein A1 (RNP A1, UP1) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1wg4a_ d.58.7.1 (A:) Splicing factor, arginine/serine-rich 9 (SFRS9) {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d2msta_ d.58.7.1 (A:) Neural RNA-binding protein Musashi-1 {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d2cpha1 d.58.7.1 (A:454-547) Probable RNA-binding protein 19, Rbm19 {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1x0fa1 d.58.7.1 (A:183-257) Nuclear ribonucleoprotein D0 (AUF1) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1p1ta_ d.58.7.1 (A:) Cleavage stimulation factor, 64 kda subunit {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1x5ua1 d.58.7.1 (A:7-99) Splicing factor 3B subunit 4 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1fxla2 d.58.7.1 (A:119-203) Hu antigen D (Hud) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1zh5a2 d.58.7.1 (A:105-189) Lupus LA protein {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1uawa_ d.58.7.1 (A:) Musashi-1 {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d2cqca1 d.58.7.1 (A:109-191) Arginine/serine-rich splicing factor 10 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure