Citrus Sinensis ID: 022356

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------30
Protein Sequence
MKGIDHIFCASQASTAICLSMQQDEASSSSTIHLGGRAIDRHNPIIRDGRRLAKALPSAPCSSEPLPINPKPYHQLPKPNNNKKSSSSSSKKSSSDKKKKSSSNSKPLAEQTNKILSSTNNDATIYKDCYTAMPADIKKKSCAQLGDFITPPGSSRYLLSDAGFIDGLSDYDPVLALVPETGPEKTSTLINGDDSSAAKSPSSSSRSEKPPSNQVVVLRVSLHCKGCEGKVRKHLSRMKGVSSFNIDFAAKKVTVVGDVTPLSVLASISKVKNAQFWPAAAAATSPASAPAAFPGNNK
Secondary Structure (PSIPRED)
cccccEEEEcccccHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEEEEccHHHHHHHHHHHHHccccccEEEEEccccEEEEEEEccHHHHHHHHHHcccEEEcccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
ccccccEEEccccccEEEEcccccccccccccccccccccccccccccccccccccccccccccccccccccHHccccccccccccccccccccccccccccccccccccHHHHHcccccccccccccccccccHHccccccccccccccccccccHccccccHccccccccccccccccccccccHHcccccccccccccccccccccccccEEEEEEEEEcccHHHHHHHHHHHHcccEEEEEEEccccEEEEEEcccHHHHHHHHHHccccEccccccccccccccccccccccc
Coil and Loop (DISEMBL)
MKGIDHIFCASQASTAICLSMqqdeasssstihlggraidrhnpiirDGRRLakalpsapcsseplpinpkpyhqlpkpnnnkksssssskksssdkkkksssnskplaEQTNKILsstnndatiykdcytampadikKKSCAqlgdfitppgssryllsdagfidglsdydpvlalvpetgpektstlingddssaakspssssrsekppsnqVVVLRVSLHCKGCEGKVRKHLSRmkgvssfniDFAAKKVTVVGDVTPLSVLASISkvknaqfwpaaaaatspasapaafpgnnk
Flexible Loop (DISEMBL)
MKGIDHIFCASQASTAICLSMQQDEASssstihlggraidrhnpiIRDGRRLAKALPSAPCSSEPLPINpkpyhqlpkpnnnkksssssskksssdkkkksssnskplaeqtnkilsstnndatIYKDCYTAMPADIKKKSCAQLGDFITPPGSSRYLLSDAGFIDGLSDYDPVLALVPETGPektstlingddssaakspssssrsekppsnqVVVLRVSLHCKGCEGKVRKHLSRMKGVSSFNIDFAAKKVTVVGDVTPLSVLASISKVKNAQFWPAAAaatspasapaafpgnnk
Low Complexity Region (SEG)
MKGIDHIFCASQASTAICLSMQQDEASSSSTIHLGGRAIDRHNPIIRDGRRLAKALPSAPCSSEPLPINPKPYHQLPKPnnnkksssssskksssdkkkksssnskPLAEQTNKILSSTNNDATIYKDCYTAMPADIKKKSCAQLGDFITPPGSSRYLLSDAGFIDGLSDYDPVLALVPETGPEKTSTLINGDDssaakspssssrsekppsNQVVVLRVSLHCKGCEGKVRKHLSRMKGVSSFNIDFAAKKVTVVGDVTPLSVLASISKVKNAQFWpaaaaatspasapaaFPGNNK
Disordered region (IsUnstruct)
****DHIFCASQASTAICL******************************************************************************************************DATIYKDCYTAMPADIKKKSCAQLGDFITPPGSSRYLLSDAGFIDGLSDYDPVLALV************************************VVVLRVSLHCKGCEGKVRKHLSRMKGVSSFNIDFAAKKVTVVGDVTPLSVLASISKVKNAQFWPAA******************
Disordered Region (DISOPRED)
*******FCASQASTAICL*********************************************************************************************************I***CY*************************************************************************************VVLRVSLHCKGCEGKVRKHLSRMKGVSSFNIDFAAKKVTVVGDVTPLSVLASISKVKNAQF**********************
Disordered Region (DISEMBL)
MKGIDHIFCASQASTAICLS***********IHLGGRAIDRHNPIIRDGRRLAKALPSAPCSSEPLPINPKPYHQLP**********************************TNKILSSTNNDATIYKDCYTAMPADIKKKSCAQLGDFITPPGSSRYLLSDAGFIDGLSDYDPVLALVPETGPEKTSTLIN**********************QVVVLRVSLHCKGCEGKVRKHLSRMKGVSSFNIDFAAKKVTVVGDVTPLSVLASISKVKNAQFW*********************
Disordered Region (DISPRO)
***IDHIFCASQAST**C************************************ALP*********PIN***************************************************************M****KK*SCAQLGDFITPPGSSR*LLSDAG**********************************************PPSNQVVVLRVSLHCKGCEGKVRKHLSRMKGVSSFNIDFAAKKVTVVGDVTPLSVLASISKVKN*QFWP********************
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
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Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
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TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MKGIDHIFCASQASTAICLSMQQDEASSSSTIHLGGRAIDRHNPIIRDGRRLAKALPSAPCSSEPLPINPKPYHQLPKPNNNKKSSSSSSKKSSSDKKKKSSSNSKPLAEQTNKILSSTNNDATIYKDCYTAMPADIKKKSCAQLGDFITPPGSSRYLLSDAGFIDGLSDYDPVLALVPETGPEKTSTLINGDDSSAAKSPSSSSRSEKPPSNQVVVLRVSLHCKGCEGKVRKHLSRMKGVSSFNIDFAAKKVTVVGDVTPLSVLASISKVKNAQFWPAAAAATSPASAPAAFPGNNK
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	298	2.2.26 [Sep-21-2011]
Q9SZN7	153	Heavy metal-associated is	no	no	0.258	0.503	0.417	4e-08

>sp|Q9SZN7|HIP26_ARATH Heavy metal-associated isoprenylated plant protein 26 OS=Arabidopsis thaliana GN=HIPP26 PE=1 SV=1

 Score = 58.9 bits (141), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 33/79 (41%), Positives = 46/79 (58%), Gaps = 2/79 (2%)

Query: 202 SSSSRSEKPPSNQVVVLRVSLHCKGCEGKVRKHLSRMKGVSSFNIDFAAKKVTVVGDVTP 261
           S   + +K    Q V ++V + C+GCE KVR+ +  MKGVSS  ++  A KVTVVG V P
Sbjct: 14  SHGHKIKKRKQLQTVEIKVKMDCEGCERKVRRSVEGMKGVSSVTLEPKAHKVTVVGYVDP 73

Query: 262 LSVLASISKV--KNAQFWP 278
             V+A +S    K  + WP
Sbjct: 74  NKVVARMSHRTGKKVELWP 92

Heavy-metal-binding protein. Binds lead, cadmium and copper. May be involved in heavy-metal transport.
Arabidopsis thaliana (taxid: 3702)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	298
255586894	289	chloroplast-targeted copper chaperone, p	0.922	0.951	0.568	7e-78
255646473	276	unknown [Glycine max]	0.875	0.945	0.578	8e-75
356548164	276	PREDICTED: uncharacterized protein LOC10	0.875	0.945	0.582	2e-73
356536887	279	PREDICTED: uncharacterized protein LOC10	0.879	0.939	0.568	1e-71
225439844	270	PREDICTED: uncharacterized protein LOC10	0.862	0.951	0.547	2e-66
356505146	290	PREDICTED: uncharacterized protein LOC10	0.899	0.924	0.554	6e-66
118487472	281	unknown [Populus trichocarpa]	0.882	0.935	0.550	3e-64
357510533	286	Metal ion binding protein [Medicago trun	0.909	0.947	0.548	4e-63
224140113	281	predicted protein [Populus trichocarpa]	0.879	0.932	0.545	6e-63
356572359	290	PREDICTED: uncharacterized protein LOC10	0.882	0.906	0.558	2e-62

>gi|255586894|ref|XP_002534052.1| chloroplast-targeted copper chaperone, putative [Ricinus communis] gi|223525923|gb|EEF28330.1| chloroplast-targeted copper chaperone, putative [Ricinus communis]

 Score =  296 bits (758), Expect = 7e-78,   Method: Compositional matrix adjust.
 Identities = 174/306 (56%), Positives = 216/306 (70%), Gaps = 31/306 (10%)

Query: 1   MKGIDHIFCASQASTAICLSMQQ--DEASSSSTIHLGGRAIDRHNPIIRDGRRLAKALPS 58
           MK  D +FCASQASTAIC+SM Q    + SSST  LGGR IDRHNPIIRD +R  +ALP 
Sbjct: 1   MKRRD-MFCASQASTAICMSMDQPSSSSLSSSTAQLGGRNIDRHNPIIRDQKRTPRALPL 59

Query: 59  APCSSEPLPINPKPYHQLPKP------NNNKKSSSSSSKKSSSDKKKKSSSNSKPLAEQT 112
           APC+S+  PINP+PYH L +       N N +S   SS+K +   +K   S+SKP  +  
Sbjct: 60  APCTSQTPPINPQPYHLLRRSKTSNTSNVNDQSKKKSSRKQNDLVRKDKKSSSKP--DDG 117

Query: 113 NKILSSTNNDATIYKDCYTAMPADIKKKSCAQLGDFITPPGSSRYLLSDAGFIDGLSDYD 172
           NK     +  AT+ K+        +++KS AQ GDFITPPGSSRYLLSD  FIDGLSDYD
Sbjct: 118 NK----KDRSATVAKEVV------VQRKSWAQPGDFITPPGSSRYLLSDKDFIDGLSDYD 167

Query: 173 PVLALVP-ETGPEKTSTLINGDDSSAAKSPSSSSRSEKPPSNQVVVLRVSLHCKGCEGKV 231
           P+LA+VP ++    T    +  +S+++K+ S S+ SE+P SNQVVVLRVSLHC+GCEGKV
Sbjct: 168 PILAMVPAQSKRFLTQAASDQQESTSSKTFSMSNSSERP-SNQVVVLRVSLHCRGCEGKV 226

Query: 232 RKHLSRMKGVSSFNIDFAAKKVTVVGDVTPLSVLASISKVKNAQFWPAAAAATSPASAPA 291
           RKHLSRM+GVSSF+IDFAAKKVT+VGDV+PL VLAS+SKVK+AQFW       +PA+ PA
Sbjct: 227 RKHLSRMEGVSSFSIDFAAKKVTIVGDVSPLGVLASVSKVKSAQFW-------TPAN-PA 278

Query: 292 AFPGNN 297
           A P  N
Sbjct: 279 AVPSVN 284

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255646473|gb|ACU23715.1| unknown [Glycine max]

 Score =  286 bits (732), Expect = 8e-75,   Method: Compositional matrix adjust.
 Identities = 165/285 (57%), Positives = 189/285 (66%), Gaps = 24/285 (8%)

Query: 1   MKGIDHIFCASQASTAICLSMQQDEASSSSTIHLGGRAIDRHNPIIRDGRRLAKALPSAP 60
           MK ID IFCASQASTAICLSM Q   SSS+TI LGGR IDRHNPII D RR      +AP
Sbjct: 1   MKRID-IFCASQASTAICLSMDQASCSSSNTILLGGRTIDRHNPIINDSRRSTSKSLTAP 59

Query: 61  CSSEPLPINPKPYHQLPKPNNNKKSSSSSSKKSSSDKKKKSSSNSKPLAEQTNKILSSTN 120
           CSS   PINPKPYH+L K    KK+SSS +     D +KK S+  K     TN       
Sbjct: 60  CSSSQSPINPKPYHELHKA---KKNSSSKNATKGHDNQKKRSTAEKLTEHVTN------- 109

Query: 121 NDATIYKDCYTAMPAD--IKKKSCAQLGDFITPPGSSRYLLSDAGFIDGLSDYDPVLALV 178
                     T+ P D  + +       D ITPPGS+R LLSD   +DG SDYDPVLAL 
Sbjct: 110 ----------TSKPIDDIVPRSWLKPPADLITPPGSTRSLLSDTALLDGSSDYDPVLALT 159

Query: 179 PETGPEKTSTLINGDDSSAAKSPSSSSRSEKPPSNQVVVLRVSLHCKGCEGKVRKHLSRM 238
                 KTS  ++ D+++     SSS   +   S+QVVVLRVSLHCKGCEGKVRKHLSRM
Sbjct: 160 TMIN-NKTSQAVHQDEANPVSKLSSSFHPKSGSSDQVVVLRVSLHCKGCEGKVRKHLSRM 218

Query: 239 KGVSSFNIDFAAKKVTVVGDVTPLSVLASISKVKNAQFWPAAAAA 283
           +GV+SFNIDFA+KKVTVVGDVTPLSVLASISKVKNAQ WPA+A+A
Sbjct: 219 QGVTSFNIDFASKKVTVVGDVTPLSVLASISKVKNAQLWPASASA 263

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356548164|ref|XP_003542473.1| PREDICTED: uncharacterized protein LOC100813295 [Glycine max]

 Score =  282 bits (721), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 166/285 (58%), Positives = 190/285 (66%), Gaps = 24/285 (8%)

Query: 1   MKGIDHIFCASQASTAICLSMQQDEASSSSTIHLGGRAIDRHNPIIRDGRRLAKALPSAP 60
           MK ID IFCASQASTAICLSM Q   SSS+TI LGGR IDRHNPII D RR      +AP
Sbjct: 1   MKRID-IFCASQASTAICLSMDQASCSSSNTILLGGRTIDRHNPIINDSRRSTSKSLTAP 59

Query: 61  CSSEPLPINPKPYHQLPKPNNNKKSSSSSSKKSSSDKKKKSSSNSKPLAEQTNKILSSTN 120
           CSS   PINPKPYH+L K    KK+SSS +     D +KK S+  K     TN       
Sbjct: 60  CSSSQSPINPKPYHELHKA---KKNSSSKNATKGHDNQKKRSTAEKLTEHVTN------- 109

Query: 121 NDATIYKDCYTAMPAD--IKKKSCAQLGDFITPPGSSRYLLSDAGFIDGLSDYDPVLALV 178
                     T+ P D  + +       D ITPPGS+R LLSD   +DG SDYDPVLAL 
Sbjct: 110 ----------TSKPIDDIVPRSWLKPPADLITPPGSTRSLLSDTALLDGSSDYDPVLALT 159

Query: 179 PETGPEKTSTLINGDDSSAAKSPSSSSRSEKPPSNQVVVLRVSLHCKGCEGKVRKHLSRM 238
                 KTS  ++ D+++     SSSS  +   S+QVVVLRVSLHCKGCEGKVRKHLSRM
Sbjct: 160 TMIN-NKTSQAVHQDEANPVSKLSSSSHPKSGSSDQVVVLRVSLHCKGCEGKVRKHLSRM 218

Query: 239 KGVSSFNIDFAAKKVTVVGDVTPLSVLASISKVKNAQFWPAAAAA 283
           +GV+SFNIDFA+KKVTVVGDVTPLSVLASISKVKNAQ WPA+A+A
Sbjct: 219 QGVTSFNIDFASKKVTVVGDVTPLSVLASISKVKNAQLWPASASA 263

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356536887|ref|XP_003536964.1| PREDICTED: uncharacterized protein LOC100797952 [Glycine max]

 Score =  276 bits (705), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 162/285 (56%), Positives = 193/285 (67%), Gaps = 23/285 (8%)

Query: 1   MKGIDHIFCASQASTAICLSMQQDEASSSSTIHLGGRAIDRHNPIIRDGRRLAKALPSAP 60
           MK ID +FCASQASTAICLSM+Q   SSS++I LGGR +DRHNPII D RR      +AP
Sbjct: 1   MKRID-MFCASQASTAICLSMEQASCSSSNSILLGGRTMDRHNPIINDSRRSTSKSLTAP 59

Query: 61  CSSEPLPINPKPYHQLPKPNNNKKSSSSSSKKSSSDKKKKSSSNSKPLAEQTNKILSSTN 120
           CSS   PINPKPYH+L K    KK+SSS +     D   +  S ++ L E        TN
Sbjct: 60  CSSSQSPINPKPYHELHKA---KKNSSSKNAAKGHDNHHQKKSTAEKLTEHV------TN 110

Query: 121 NDATIYKDCYTAMPAD--IKKKSCAQLGDFITPPGSSRYLLSDAGFIDGLSDYDPVLALV 178
                     T+ P D  +++       + ITPPGS+R LLSD   +DG SD+DPVLAL 
Sbjct: 111 ----------TSKPVDGIVRRGWLKPPANLITPPGSTRSLLSDTALLDGSSDFDPVLALT 160

Query: 179 PETGPEKTSTLINGDDSSAAKSPSSSSRSEKPPSNQVVVLRVSLHCKGCEGKVRKHLSRM 238
             T   KTS + + D+++     SSSS  +   S+QVVVLRVSLHCKGCEGKVRKHLSRM
Sbjct: 161 -TTVNNKTSQVGHQDEANPVSKLSSSSHPKSGSSDQVVVLRVSLHCKGCEGKVRKHLSRM 219

Query: 239 KGVSSFNIDFAAKKVTVVGDVTPLSVLASISKVKNAQFWPAAAAA 283
           +GV+SFNIDFAAKKVTVVGDVTPLSVLASISKVKNAQ WPA+A+A
Sbjct: 220 QGVTSFNIDFAAKKVTVVGDVTPLSVLASISKVKNAQLWPASASA 264

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225439844|ref|XP_002277868.1| PREDICTED: uncharacterized protein LOC100244737 [Vitis vinifera] gi|297741533|emb|CBI32665.3| unnamed protein product [Vitis vinifera]

 Score =  258 bits (660), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 160/292 (54%), Positives = 194/292 (66%), Gaps = 35/292 (11%)

Query: 1   MKGIDHIFCASQASTAICLSMQQDEASSSSTIHLGGRAIDRHNPIIRDGRRLAKALPSAP 60
           MKGID IFCASQASTAIC+SM+   +SSS+ I  GGRAIDRHNPIIRD RR +    + P
Sbjct: 1   MKGID-IFCASQASTAICVSMEPGSSSSSA-IDQGGRAIDRHNPIIRDARRSSVKTLTTP 58

Query: 61  CSSEPLPINPKPYHQLPKPNNNKKSSSSSSKKSSSDKKKKSSSNSKPLAEQTNKILSSTN 120
           CSS+  PINPKPYHQL + N        ++ KS+   KK S+ N     +Q  K      
Sbjct: 59  CSSQS-PINPKPYHQLHQKNRK------TTGKSNDQIKKASAKN----VDQYGK------ 101

Query: 121 NDATIYKDCYTAMPADIKKKSCAQLGDFITPPGSSRYLLSDAGFIDGLSDYDPVLALVPE 180
                     +A P D+ +KS A+  D I+PPGSSRYLLS+  F D L D+DPVLALVP 
Sbjct: 102 ---------SSAKPLDMLRKSSAKFVDLISPPGSSRYLLSEPPFFDVLPDFDPVLALVP- 151

Query: 181 TGPEKTSTLINGDDS------SAAKSPSSSSRSEKPPSNQVVVLRVSLHCKGCEGKVRKH 234
             P+K   +   DDS      S++ S  S   S    ++QVVVLRVSLHCKGCEGK+RKH
Sbjct: 152 VEPKKAKAVNLDDDSPVLKPSSSSGSSDSKPSSSSGSADQVVVLRVSLHCKGCEGKLRKH 211

Query: 235 LSRMKGVSSFNIDFAAKKVTVVGDVTPLSVLASISKVKNAQFWPAAAAATSP 286
           +SRM+GV+SFNIDFAAKKVTVVGDVTPL VLAS+SKVK+AQ W  A A++ P
Sbjct: 212 ISRMEGVTSFNIDFAAKKVTVVGDVTPLGVLASVSKVKSAQLWTPAMASSLP 263

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356505146|ref|XP_003521353.1| PREDICTED: uncharacterized protein LOC100810015 [Glycine max]

 Score =  256 bits (655), Expect = 6e-66,   Method: Compositional matrix adjust.
 Identities = 167/301 (55%), Positives = 194/301 (64%), Gaps = 33/301 (10%)

Query: 1   MKGIDHIFCASQASTAICLSMQQ----DEASSSSTIHLGGRAIDRHNPIIRDGRRLAKAL 56
           MKGID IFCASQASTAICL M Q       S S+T   GGRAIDRHNPII D RR     
Sbjct: 1   MKGID-IFCASQASTAICLGMDQPSSSSSISISNTAQFGGRAIDRHNPIITDPRRTPSRD 59

Query: 57  PSAPCSSEPLPINPKPYH-QLPKPNNNKKSSSSSSKKSSS----DKKKKSSSNSKPLAEQ 111
             +PCSS   PI+PKP H  L K   N  S  S  KK ++    D+KKKS++    L E 
Sbjct: 60  LISPCSSSLSPIDPKPLHDHLQKAKKNSTSKPSGQKKKNASKGHDQKKKSAAGK--LTEH 117

Query: 112 TNKILSSTNNDATIYKDCYTAMPAD-IKKKSCAQL-GDFITPPGSSRYLLSDAGFIDGLS 169
                  TNN        Y++ P D I ++S A+   D ITPPGSSRYLL D    D +S
Sbjct: 118 I------TNN--------YSSKPIDSILRRSWARPPSDLITPPGSSRYLLGDTPSFDCVS 163

Query: 170 D-YDPVLALVPETGPEKT-STLINGDDSSAAKSPSSSSRSEKPPSNQVVVLRVSLHCKGC 227
             YDPVLAL   T  EK  + +I+ D+++ +  PSSS+  +   S+QVV LRVSLHCKGC
Sbjct: 164 SVYDPVLAL---TNVEKEKAQVIHHDETNHSSKPSSSTLPKTDSSDQVVELRVSLHCKGC 220

Query: 228 EGKVRKHLSRMKGVSSFNIDFAAKKVTVVGDVTPLSVLASISKVKNAQFWPAAAAATSPA 287
           EGKVRKHLSRM+GV SFNIDFAAKKVTVVGDVTPLSVLASISKVKNAQFWP  A+    A
Sbjct: 221 EGKVRKHLSRMRGVRSFNIDFAAKKVTVVGDVTPLSVLASISKVKNAQFWPEHASVIGSA 280

Query: 288 S 288
           +
Sbjct: 281 T 281

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|118487472|gb|ABK95563.1| unknown [Populus trichocarpa]

 Score =  251 bits (641), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 157/285 (55%), Positives = 196/285 (68%), Gaps = 22/285 (7%)

Query: 1   MKGIDHIFCASQASTAICLSMQQDEASSSSTIHLGGRAIDRHNPIIRDGRRLAKALPSAP 60
           MK ID +FCASQASTAIC+SM +  +SSSSTI  GG  IDR NP+IRD +R+ + LP  P
Sbjct: 1   MKKID-MFCASQASTAICMSMDR-PSSSSSTIQPGGPTIDRCNPVIRDQKRIPRTLPLVP 58

Query: 61  CSSEPLPINPKPYHQLPKPNNNKKSSSSSSKKSSSDK---KKKSSSNSKPLA-EQTNKIL 116
           C+S+P PINP PY  L       KS  S+SK  +SD+   KK +S+  KP   +Q NK +
Sbjct: 59  CTSQPPPINPVPYQLL------HKSQKSTSKNKASDQNSNKKSNSTKPKPKPNDQKNKKI 112

Query: 117 S---STNNDATIYKDCYTAMPADIKKKSCAQLG-DFITPPGSSRYLLSDAGFIDGLSDYD 172
           S   +  +D          +P DI +KS A+ G   I PPGSSR LL DA F+DG+ DYD
Sbjct: 113 SFKPADIDDDDKKSAASLNVPKDIVRKSWAKPGGSIIAPPGSSRNLLGDAAFVDGIPDYD 172

Query: 173 PVLALVPETGPEKTSTLINGDDSSAAKSPSSSSRSEKPPSNQVVVLRVSLHCKGCEGKVR 232
           PV A +    P  ++  ++ ++S+A++  SSSS       NQVVVLRVSLHCKGCEGKVR
Sbjct: 173 PVSAQLVPVEPNMSTQALSKEESTASRPSSSSS------PNQVVVLRVSLHCKGCEGKVR 226

Query: 233 KHLSRMKGVSSFNIDFAAKKVTVVGDVTPLSVLASISKVKNAQFW 277
           KHLSRM+GV+SFNIDFAAKKVTVVGDVTPL VLAS+SK+K+AQFW
Sbjct: 227 KHLSRMEGVTSFNIDFAAKKVTVVGDVTPLRVLASVSKIKSAQFW 271

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357510533|ref|XP_003625555.1| Metal ion binding protein [Medicago truncatula] gi|355500570|gb|AES81773.1| Metal ion binding protein [Medicago truncatula]

 Score =  247 bits (631), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 159/290 (54%), Positives = 195/290 (67%), Gaps = 19/290 (6%)

Query: 1   MKGIDHIFCASQASTAICLSMQQ-DEASSSSTI-HLGGRAIDRHNPIIRDGRRL-AKALP 57
           MKGI+ IFCASQASTAICL+      +SSS+TI H GGRAIDRHNPII D +R  A+ L 
Sbjct: 1   MKGIE-IFCASQASTAICLNTNHASSSSSSNTINHFGGRAIDRHNPIITDPKRTPARDLT 59

Query: 58  -SAPCSSEPLPINPKPYHQLPKPNNNKKSSSSSSKKSSSDKKKKSSSNSKPLAEQTNKIL 116
            +AP S  PLPINPK  H+  K N   K S         DKKKK+++  K   +Q  K  
Sbjct: 60  VTAPSSPSPLPINPKHVHEKAKKNTTSKLS---------DKKKKNAT--KSTHDQKKKST 108

Query: 117 SSTNNDATIYKDCYTAMPAD-IKKKSCAQ-LGDFITPPGSSRYLLSDAGFIDGLSDYDPV 174
           ++T        + Y++ P D I ++S  +   D ITPP SSRYLL D   +DG+ DY+PV
Sbjct: 109 TTTEKVTEHIANNYSSKPVDSILRRSWVKPASDLITPPTSSRYLLGDTVSLDGVLDYEPV 168

Query: 175 LALVPETGPEKTSTLINGD-DSSAAKSPSSSSRSEKPPSNQVVVLRVSLHCKGCEGKVRK 233
           L L      +K + +++ D D  ++K  SSSS  +   +NQVVVLRVSLHCKGCEGKVRK
Sbjct: 169 LGLTKVDDNKKNAQVLHEDEDKHSSKQYSSSSVPKSSSTNQVVVLRVSLHCKGCEGKVRK 228

Query: 234 HLSRMKGVSSFNIDFAAKKVTVVGDVTPLSVLASISKVKNAQFWPAAAAA 283
           HLSRM+GV+SFNIDFAAKKVTVVGDVTPLSV+ASISKVK AQ WP +A A
Sbjct: 229 HLSRMQGVTSFNIDFAAKKVTVVGDVTPLSVMASISKVKTAQIWPESATA 278

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224140113|ref|XP_002323431.1| predicted protein [Populus trichocarpa] gi|222868061|gb|EEF05192.1| predicted protein [Populus trichocarpa]

 Score =  247 bits (630), Expect = 6e-63,   Method: Compositional matrix adjust.
 Identities = 156/286 (54%), Positives = 195/286 (68%), Gaps = 24/286 (8%)

Query: 1   MKGIDHIFCASQASTAICLSMQQDEASSSSTIHLGGRAIDRHNPIIRDGRRLAKALPSAP 60
           MK ID +FCASQASTAIC+SM +  +SSSSTI  GG  IDR NP+IRD +R+ + LP  P
Sbjct: 1   MKKID-MFCASQASTAICMSMDR-PSSSSSTIQPGGPTIDRCNPVIRDQKRIPRTLPLVP 58

Query: 61  CSSEPLPINPKPYHQLPKPNNNKKSSSSSSKKSSSDK---KKKSSSNSKPLA-EQTNKIL 116
           C+S+P PINP PY  L       KS  S+SK  +SD+   KK +S+  KP   +Q NK +
Sbjct: 59  CTSQPPPINPVPYQLL------HKSQKSTSKNKASDQNSNKKSNSTKPKPKPNDQKNKKI 112

Query: 117 S----STNNDATIYKDCYTAMPADIKKKSCAQLG-DFITPPGSSRYLLSDAGFIDGLSDY 171
           S      ++D          +  DI +KS A+ G   I PPGSSR LL DA F+DG+ DY
Sbjct: 113 SFKPADIDDDDKKSAASLNVL-KDIVRKSWAKPGGSIIAPPGSSRNLLGDAAFVDGIPDY 171

Query: 172 DPVLALVPETGPEKTSTLINGDDSSAAKSPSSSSRSEKPPSNQVVVLRVSLHCKGCEGKV 231
           DPV A +    P  ++  ++ ++S+A++  SSSS       NQVVVLRVSLHCKGCEGKV
Sbjct: 172 DPVSAQLVPVEPNMSTQALSKEESTASRPSSSSS------PNQVVVLRVSLHCKGCEGKV 225

Query: 232 RKHLSRMKGVSSFNIDFAAKKVTVVGDVTPLSVLASISKVKNAQFW 277
           RKHLSRM+GV+SFNIDFAAKKVTVVGDVTPL VLAS+SK+K+AQFW
Sbjct: 226 RKHLSRMEGVTSFNIDFAAKKVTVVGDVTPLRVLASVSKIKSAQFW 271

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356572359|ref|XP_003554336.1| PREDICTED: uncharacterized protein LOC100786319 [Glycine max]

 Score =  245 bits (626), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 166/297 (55%), Positives = 192/297 (64%), Gaps = 34/297 (11%)

Query: 1   MKGIDHIFCASQASTAICLSMQQ-------DEASSSSTIHLGGRAIDRHNPIIRDGRRLA 53
           MKGID IFCASQASTAICLSM Q         +S S+T   GGRAIDRHNPII D RR  
Sbjct: 1   MKGID-IFCASQASTAICLSMDQPSSSYSSSSSSISNTAQFGGRAIDRHNPIITDPRRTP 59

Query: 54  KALPSAPCSSEPLPINPKPYH-QLPKPNNNKKSSSSSSKKSSS----DKKKKSSSNSKPL 108
                +P SS   PI PKP H  L K   N  S  S  KK S+    D+KKKS++    L
Sbjct: 60  SRDLISPSSSSQSPIEPKPLHDHLQKTKKNSTSKPSGQKKKSAAKGHDQKKKSAAGK--L 117

Query: 109 AEQTNKILSSTNNDATIYKDCYTAMPAD-IKKKSCAQL-GDFITPPGSSRYLLSDAGFID 166
            E        TNN        Y++ P D I ++S A+   D ITPPGSSRYLL D   +D
Sbjct: 118 TEHI------TNN--------YSSKPIDSILRRSWARPPSDLITPPGSSRYLLIDTPSLD 163

Query: 167 GLSD-YDPVLALVPETGPEKTSTLINGDDSSAAKSPSSSSRSEKPPSNQVVVLRVSLHCK 225
            +S  YDPVLAL  +   EK + +I+ D +  +  PSSS+  +   S+QVV LRVSLHCK
Sbjct: 164 RVSSVYDPVLALT-DVNKEK-AQVIHLDQTKHSSKPSSSTLPKSDSSDQVVELRVSLHCK 221

Query: 226 GCEGKVRKHLSRMKGVSSFNIDFAAKKVTVVGDVTPLSVLASISKVKNAQFWPAAAA 282
           GCEGKVRKHLSRM+GV+SFNIDFAAKKVTVVGDVTPLSVLASISKVKNAQFWP  A+
Sbjct: 222 GCEGKVRKHLSRMRGVTSFNIDFAAKKVTVVGDVTPLSVLASISKVKNAQFWPEHAS 278

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	298
TAIR|locus:2181718	319	NAKR1 "SODIUM POTASSIUM ROOT D	0.218	0.203	0.861	1e-49
TAIR|locus:2049731	259	NAKR2 "AT2G37390" [Arabidopsis	0.392	0.451	0.562	3.6e-42
TAIR|locus:2083966	248	NAKR3 "SODIUM POTASSIUM ROOT D	0.399	0.479	0.515	2.4e-35
TAIR|locus:2065526	265	AT2G28660 "AT2G28660" [Arabido	0.526	0.592	0.389	3.2e-28
TAIR|locus:2094864	140	AT3G24450 "AT3G24450" [Arabido	0.214	0.457	0.5	3e-14
TAIR|locus:2205288	106	ATX1 "homolog of anti-oxidant	0.218	0.613	0.469	6.4e-12
TAIR|locus:2078461	121	CCH "copper chaperone" [Arabid	0.214	0.528	0.461	3.5e-11
TAIR|locus:2121199	153	FP6 "farnesylated protein 6" [	0.214	0.418	0.454	6e-09
TAIR|locus:2180265	352	AT5G27690 [Arabidopsis thalian	0.204	0.173	0.467	7.8e-09
TAIR|locus:2133544	150	AT4G08570 "AT4G08570" [Arabido	0.214	0.426	0.439	2.3e-08

TAIR|locus:2181718 NAKR1 "SODIUM POTASSIUM ROOT DEFECTIVE 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 296 (109.3 bits), Expect = 1.0e-49, Sum P(3) = 1.0e-49
 Identities = 56/65 (86%), Positives = 63/65 (96%)

Query:   213 NQVVVLRVSLHCKGCEGKVRKHLSRMKGVSSFNIDFAAKKVTVVGDVTPLSVLASISKVK 272
             +QVVVLRVSLHCKGC GKV+KHLS++KGV+S+NIDFAAKKVTV GDVTPL+VLASISKVK
Sbjct:   249 DQVVVLRVSLHCKGCAGKVKKHLSKLKGVTSYNIDFAAKKVTVTGDVTPLTVLASISKVK 308

Query:   273 NAQFW 277
             NAQFW
Sbjct:   309 NAQFW 313

GO:0009507 "chloroplast" evidence=ISM

GO:0030001 "metal ion transport" evidence=IEA;ISS

GO:0046872 "metal ion binding" evidence=IEA;ISS;IDA

GO:0005634 "nucleus" evidence=IDA

GO:0005737 "cytoplasm" evidence=IDA

GO:0009908 "flower development" evidence=IMP

GO:0010015 "root morphogenesis" evidence=IMP

GO:0010233 "phloem transport" evidence=IMP

GO:0055078 "sodium ion homeostasis" evidence=IMP

TAIR|locus:2049731 NAKR2 "AT2G37390" [Arabidopsis thaliana (taxid:3702)]

 Score = 320 (117.7 bits), Expect = 3.6e-42, Sum P(2) = 3.6e-42
 Identities = 76/135 (56%), Positives = 86/135 (63%)

Query:   147 DFI-TPPGSSRYLL-SDAGFIDGLSDYDPVLALVPET--GPEKTSTLINGDDXXXXXXXX 202
             D I TP GS+RYLL SD   I G  D DP   +  E   G +KT T              
Sbjct:   124 DLIKTPVGSTRYLLGSDPDSITGSVDQDPAKTVEAEAPAGEDKTLT-------------- 169

Query:   203 XXXXXXXXXXNQVVVLRVSLHCKGCEGKVRKHLSRMKGVSSFNIDFAAKKVTVVGDVTPL 262
                        QVVVL+VSLHC+GCEGKVRKHL+RM+GV+SFNIDFAAKKVTV GD+TPL
Sbjct:   170 EKKTTCGDTDQQVVVLKVSLHCRGCEGKVRKHLARMQGVTSFNIDFAAKKVTVTGDITPL 229

Query:   263 SVLASISKVKNAQFW 277
              +L SISKVKNAQFW
Sbjct:   230 EILDSISKVKNAQFW 244

GO:0005575 "cellular_component" evidence=ND

GO:0030001 "metal ion transport" evidence=IEA;ISS

GO:0046872 "metal ion binding" evidence=IEA;ISS

TAIR|locus:2083966 NAKR3 "SODIUM POTASSIUM ROOT DEFECTIVE 3" [Arabidopsis thaliana (taxid:3702)]

 Score = 286 (105.7 bits), Expect = 2.4e-35, Sum P(2) = 2.4e-35
 Identities = 68/132 (51%), Positives = 83/132 (62%)

Query:   150 TPPGSSRYLL-SDAGFIDGLSDYDPVLALVPETGPEKTSTLINGDDXXXXXXXXXXXXXX 208
             TPPGS+RYLL SD   + G +  D V     E    K  +  +G                
Sbjct:   112 TPPGSTRYLLGSDPVSLAGSTGQDTVATEESEASAPKRGS--SGP-------VEEKKKSS 162

Query:   209 XXXXNQVVVLRVSLHC--KGCEGKVRKHLSRMK-GVSSFNIDFAAKKVTVVGDVTPLSVL 265
                 +QVVVLRVSLHC  +GC+GKV+KHLS+M+ GV+SFNIDFA+KKVTV GD+TPL VL
Sbjct:   163 GSGSDQVVVLRVSLHCHCRGCQGKVKKHLSKMQVGVTSFNIDFASKKVTVTGDITPLEVL 222

Query:   266 ASISKVKNAQFW 277
               +SKVKNAQFW
Sbjct:   223 GCLSKVKNAQFW 234

GO:0005634 "nucleus" evidence=ISM

GO:0030001 "metal ion transport" evidence=IEA;ISS

GO:0046872 "metal ion binding" evidence=IEA;ISS

TAIR|locus:2065526 AT2G28660 "AT2G28660" [Arabidopsis thaliana (taxid:3702)]

 Score = 260 (96.6 bits), Expect = 3.2e-28, Sum P(2) = 3.2e-28
 Identities = 67/172 (38%), Positives = 91/172 (52%)

Query:   114 KILSSTNNDATIYKDCYTAMPADIKKKSCAQLGDFITPPGSSRYLLSDAGFIDG------ 167
             KI S+  +D  I +   +A  +D+++   + L        SSRYLL D   + G      
Sbjct:    82 KIASARGSDVQIRRKS-SADVSDLRRSRSSLLSS------SSRYLLKDHKSLKGDDKDLW 134

Query:   168 -LSDYDPVLALVPETG-PEKTSTLINGDDXXXXXXXXXXXXXXXXXXNQVVVLRVSLHCK 225
               SD    L L  +       S+  +                     +QVVVLRVS+HCK
Sbjct:   135 LSSDRSKDLILYRDRNVTSSASSSSSSSSSSFSSSVTNVSSPAPSTDDQVVVLRVSIHCK 194

Query:   226 GCEGKVRKHLSRMKGVSSFNIDFAAKKVTVVGDVTPLSVLASISKVKNAQFW 277
             GCEGKVRKH+S+M+GV+S+ ID A KKVTVVG +TP+ ++ SISKVK AQ W
Sbjct:   195 GCEGKVRKHISKMEGVTSYTIDLATKKVTVVGKITPVGLVESISKVKFAQLW 246

GO:0005507 "copper ion binding" evidence=ISS

GO:0005634 "nucleus" evidence=ISM

GO:0006825 "copper ion transport" evidence=ISS

GO:0030001 "metal ion transport" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

GO:0006612 "protein targeting to membrane" evidence=RCA

GO:0009963 "positive regulation of flavonoid biosynthetic process" evidence=RCA

GO:0010363 "regulation of plant-type hypersensitive response" evidence=RCA

TAIR|locus:2094864 AT3G24450 "AT3G24450" [Arabidopsis thaliana (taxid:3702)]

 Score = 183 (69.5 bits), Expect = 3.0e-14, P = 3.0e-14
 Identities = 32/64 (50%), Positives = 47/64 (73%)

Query:   214 QVVVLRVSLHCKGCEGKVRKHLSRMKGVSSFNIDFAAKKVTVVGDVTPLSVLASISKVKN 273
             ++V L+VS+HC GC  KV KH+S++ GV+ + ++  +KKV V G++ P+ VL SI KVKN
Sbjct:    74 KIVELKVSMHCYGCAKKVEKHISKLDGVTWYKVELESKKVVVKGNILPVDVLESICKVKN 133

Query:   274 AQFW 277
             AQ W
Sbjct:   134 AQLW 137

GO:0005507 "copper ion binding" evidence=ISS

GO:0006825 "copper ion transport" evidence=ISS

GO:0030001 "metal ion transport" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

TAIR|locus:2205288 ATX1 "homolog of anti-oxidant 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 161 (61.7 bits), Expect = 6.4e-12, P = 6.4e-12
 Identities = 31/66 (46%), Positives = 47/66 (71%)

Query:   213 NQVVVLRVSLHCKGCEGKVRKHLSRMKGVSSFNIDFAAKKVTVVGDVTPLSVLASISKV- 271
             +Q VVLRV++ C+GC G V++ L +M+GV SF++D   +KVTV G+V P +VL +++K  
Sbjct:    32 SQTVVLRVAMTCEGCVGAVKRVLGKMEGVESFDVDIKEQKVTVKGNVQPDAVLQTVTKTG 91

Query:   272 KNAQFW 277
             K   FW
Sbjct:    92 KKTAFW 97

GO:0005737 "cytoplasm" evidence=ISM

GO:0005886 "plasma membrane" evidence=ISM

GO:0030001 "metal ion transport" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

GO:0000785 "chromatin" evidence=IDA

TAIR|locus:2078461 CCH "copper chaperone" [Arabidopsis thaliana (taxid:3702)]

 Score = 154 (59.3 bits), Expect = 3.5e-11, P = 3.5e-11
 Identities = 30/65 (46%), Positives = 43/65 (66%)

Query:   214 QVVVLRVSLHCKGCEGKVRKHLSRMKGVSSFNIDFAAKKVTVVGDVTPLSVLASISKV-K 272
             Q VVL+V + C+GC G V + L +M+GV SF+ID   +KVTV G+V P +V  ++SK  K
Sbjct:     3 QTVVLKVGMSCQGCVGAVNRVLGKMEGVESFDIDIKEQKVTVKGNVEPEAVFQTVSKTGK 62

Query:   273 NAQFW 277
                +W
Sbjct:    63 KTSYW 67

GO:0030001 "metal ion transport" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

GO:0046686 "response to cadmium ion" evidence=IEP

GO:0009651 "response to salt stress" evidence=IEP;RCA

GO:0009507 "chloroplast" evidence=IDA

GO:0048046 "apoplast" evidence=IDA

GO:0006598 "polyamine catabolic process" evidence=RCA

GO:0006612 "protein targeting to membrane" evidence=RCA

GO:0006816 "calcium ion transport" evidence=RCA

GO:0007030 "Golgi organization" evidence=RCA

GO:0009611 "response to wounding" evidence=RCA

GO:0009698 "phenylpropanoid metabolic process" evidence=RCA

GO:0009805 "coumarin biosynthetic process" evidence=RCA

GO:0009963 "positive regulation of flavonoid biosynthetic process" evidence=RCA

GO:0010363 "regulation of plant-type hypersensitive response" evidence=RCA

GO:0042398 "cellular modified amino acid biosynthetic process" evidence=RCA

GO:0000302 "response to reactive oxygen species" evidence=IGI

GO:0006827 "high-affinity iron ion transport" evidence=IGI

GO:0006878 "cellular copper ion homeostasis" evidence=IMP;TAS

GO:0007568 "aging" evidence=IEP

GO:0016531 "copper chaperone activity" evidence=ISS

TAIR|locus:2121199 FP6 "farnesylated protein 6" [Arabidopsis thaliana (taxid:3702)]

 Score = 135 (52.6 bits), Expect = 6.0e-09, P = 6.0e-09
 Identities = 30/66 (45%), Positives = 41/66 (62%)

Query:   214 QVVVLRVSLHCKGCEGKVRKHLSRMKGVSSFNIDFAAKKVTVVGDVTPLSVLASISKV-- 271
             Q V ++V + C+GCE KVR+ +  MKGVSS  ++  A KVTVVG V P  V+A +S    
Sbjct:    26 QTVEIKVKMDCEGCERKVRRSVEGMKGVSSVTLEPKAHKVTVVGYVDPNKVVARMSHRTG 85

Query:   272 KNAQFW 277
             K  + W
Sbjct:    86 KKVELW 91

GO:0005634 "nucleus" evidence=ISM

GO:0030001 "metal ion transport" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA;ISS

GO:0010286 "heat acclimation" evidence=IEP

GO:0005886 "plasma membrane" evidence=IDA

GO:0005515 "protein binding" evidence=IPI

GO:0009506 "plasmodesma" evidence=IDA

TAIR|locus:2180265 AT5G27690 [Arabidopsis thaliana (taxid:3702)]

 Score = 152 (58.6 bits), Expect = 7.8e-09, P = 7.8e-09
 Identities = 29/62 (46%), Positives = 45/62 (72%)

Query:   217 VLRVSLHCKGCEGKVRKHLSRMKGVSSFNIDFAAKKVTVVGDVTPLSVLASISKV-KNAQ 275
             VLRVS+HC+GC+ K++K LS++ GV + NID   +KVTV+G+V P  ++  I K  ++A+
Sbjct:    33 VLRVSIHCEGCKRKIKKILSKIDGVYTTNIDVKQQKVTVIGNVEPEILIKKIMKAGRHAE 92

Query:   276 FW 277
              W
Sbjct:    93 LW 94

GO:0005634 "nucleus" evidence=ISM

GO:0030001 "metal ion transport" evidence=IEA;ISS

GO:0046872 "metal ion binding" evidence=IEA;ISS

TAIR|locus:2133544 AT4G08570 "AT4G08570" [Arabidopsis thaliana (taxid:3702)]

 Score = 130 (50.8 bits), Expect = 2.3e-08, P = 2.3e-08
 Identities = 29/66 (43%), Positives = 41/66 (62%)

Query:   214 QVVVLRVS-LHCKGCEGKVRKHLSRMKGVSSFNIDFAAKKVTVVGDVTPLSVL-ASISKV 271
             Q V LRV+ + C+GCE K++  LS +KGV S ++D   +KVTV G + P  VL A+ S  
Sbjct:    26 QTVALRVARIDCEGCERKIKHVLSGVKGVKSVDVDVKLQKVTVTGYIDPKKVLEAAKSTK 85

Query:   272 KNAQFW 277
             K  + W
Sbjct:    86 KKVELW 91

GO:0005575 "cellular_component" evidence=ND

GO:0030001 "metal ion transport" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA;ISS

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: GSVIVG00023113001 SubName- Full=Chromosome chr8 scaffold_29, whole genome shotgun sequence; (270 aa) (Vitis vinifera)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	298
pfam00403	62	pfam00403, HMA, Heavy-metal-associated domain	2e-13
cd00371	63	cd00371, HMA, Heavy-metal-associated domain (HMA)	2e-12
COG2608	71	COG2608, CopZ, Copper chaperone [Inorganic ion tra	3e-05
TIGR02052	92	TIGR02052, MerP, mercuric transport protein peripl	0.004

>gnl|CDD|215902 pfam00403, HMA, Heavy-metal-associated domain

 Score = 63.8 bits (156), Expect = 2e-13
 Identities = 22/61 (36%), Positives = 32/61 (52%)

Query: 216 VVLRVSLHCKGCEGKVRKHLSRMKGVSSFNIDFAAKKVTVVGDVTPLSVLASISKVKNAQ 275
            +    + C GC  KV K LS++ GVSS ++D    KVTV GD  PL +      ++ A 
Sbjct: 1   TLRVPGMTCAGCAKKVEKALSKLPGVSSVSVDLETGKVTVTGDPDPLKLEKLKKAIEKAG 60

Query: 276 F 276
           +
Sbjct: 61  Y 61

Length = 62

>gnl|CDD|238219 cd00371, HMA, Heavy-metal-associated domain (HMA) is a conserved domain of approximately 30 amino acid residues found in a number of proteins that transport or detoxify heavy metals, for example, the CPx-type heavy metal ATPases and copper chaperones

 Score = 60.7 bits (148), Expect = 2e-12
 Identities = 20/57 (35%), Positives = 28/57 (49%), Gaps = 3/57 (5%)

Query: 217 VLRVS-LHCKGCEGKVRKHLSRMKGVSSFNIDFAAKKVTVVGD--VTPLSVLASISK 270
            L V  + C GC  K+ K L ++ GV S  +D    K TV  D  V+P  +L +I  
Sbjct: 1   ELSVEGMTCAGCVSKIEKALEKLPGVESVEVDLETGKATVEYDPEVSPEELLEAIED 57

HMA domain contains two cysteine residues that are important in binding and transfer of metal ions, such as copper, cadmium, cobalt and zinc. In the case of copper, stoichiometry of binding is one Cu+ ion per binding domain. Repeats of the HMA domain in copper chaperone has been associated with Menkes/Wilson disease due to binding of multiple copper ions. Length = 63

>gnl|CDD|225328 COG2608, CopZ, Copper chaperone [Inorganic ion transport and metabolism]

 Score = 40.8 bits (96), Expect = 3e-05
 Identities = 17/60 (28%), Positives = 28/60 (46%), Gaps = 1/60 (1%)

Query: 216 VVLRVS-LHCKGCEGKVRKHLSRMKGVSSFNIDFAAKKVTVVGDVTPLSVLASISKVKNA 274
             L+V  + C  C   V K L  + GV+S ++D      TV  D   + + A I  +++A
Sbjct: 4   TTLKVEGMTCGHCVKTVEKALEEVDGVASVDVDLEKGTATVTFDSNKVDIEAIIEAIEDA 63

Length = 71

>gnl|CDD|131107 TIGR02052, MerP, mercuric transport protein periplasmic component

 Score = 35.8 bits (82), Expect = 0.004
 Identities = 18/64 (28%), Positives = 25/64 (39%), Gaps = 1/64 (1%)

Query: 214 QVVVLRV-SLHCKGCEGKVRKHLSRMKGVSSFNIDFAAKKVTVVGDVTPLSVLASISKVK 272
           Q V L V  + C  C   V   L ++ GVS   + F  K   V  D    +V A      
Sbjct: 23  QTVTLEVPGMTCVACPITVETALQKVDGVSKAEVTFKTKLAVVTFDDEKTNVKALTEATT 82

Query: 273 NAQF 276
           +A +
Sbjct: 83  DAGY 86

This model represents the periplasmic mercury (II) binding protein of the bacterial mercury detoxification system which passes mercuric ion to the MerT transporter for subsequent reduction to Hg(0) by the mercuric reductase MerA. MerP contains a distinctive GMTCXXC motif associated with metal binding. MerP is related to a larger family of metal binding proteins (pfam00403) [Cellular processes, Detoxification]. Length = 92

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	298
PF00403	62	HMA: Heavy-metal-associated domain; InterPro: IPR0	99.35
KOG1603	73	consensus Copper chaperone [Inorganic ion transpor	99.32
COG2608	71	CopZ Copper chaperone [Inorganic ion transport and	99.26
KOG4656	247	consensus Copper chaperone for superoxide dismutas	98.77
PRK10671	834	copA copper exporting ATPase; Provisional	98.28
PLN02957	238	copper, zinc superoxide dismutase	98.25
TIGR00003	68	copper ion binding protein. This model describes a	97.72
COG2217	713	ZntA Cation transport ATPase [Inorganic ion transp	97.71
PRK10671	834	copA copper exporting ATPase; Provisional	96.78
KOG0207	951	consensus Cation transport ATPase [Inorganic ion t	96.75
PRK11033	741	zntA zinc/cadmium/mercury/lead-transporting ATPase	96.1
KOG0207	951	consensus Cation transport ATPase [Inorganic ion t	95.98
TIGR02052	92	MerP mercuric transport protein periplasmic compon	93.69
cd00371	63	HMA Heavy-metal-associated domain (HMA) is a conse	81.25

>PF00403 HMA: Heavy-metal-associated domain; InterPro: IPR006121 Proteins that transport heavy metals in micro-organisms and mammals share similarities in their sequences and structures

Probab=99.35  E-value=2.8e-12  Score=92.92  Aligned_cols=56  Identities=36%  Similarity=0.635  Sum_probs=52.0

Q ss_pred             EEEE-eecchhhHHHHHHHhhccCCcceeEEecCCCEEEEEec---CCHHHHHHHHHhh-c
Q 022356          217 VLRV-SLHCKGCEGKVRKHLSRMKGVSSFNIDFAAKKVTVVGD---VTPLSVLASISKV-K  272 (298)
Q Consensus       217 vLkV-gM~C~gCa~KIeKAL~kIeGVesV~VDl~skkVtV~G~---vdp~eLlkaL~Kl-K  272 (298)
                      +|+| ||+|++|+.+|+++|.+++||.++.||+.+++|+|.++   +++++|.++|+++ |
T Consensus         1 t~~v~~m~C~~C~~~v~~~l~~~~GV~~v~vd~~~~~v~v~~~~~~~~~~~i~~~i~~~Gy   61 (62)
T PF00403_consen    1 TFKVPGMTCEGCAKKVEKALSKLPGVKSVKVDLETKTVTVTYDPDKTSIEKIIEAIEKAGY   61 (62)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEESTTTSCHHHHHHHHHHTTS
T ss_pred             CEEECCcccHHHHHHHHHHHhcCCCCcEEEEECCCCEEEEEEecCCCCHHHHHHHHHHhCc
Confidence            6899 99999999999999999999999999999999999986   4569999999986 5

These proteins provide an important focus for research, some being involved in bacterial resistance to toxic metals, such as lead and cadmium, while others are involved in inherited human syndromes, such as Wilson's and Menke's diseases []. A conserved domain has been found in a number of these heavy metal transport or detoxification proteins []. The domain, which has been termed Heavy-Metal-Associated (HMA), contains two conserved cysteines that are probably involved in metal binding. Structure solution of the fourth HMA domain of the Menke's copper transporting ATPase shows a well-defined structure comprising a four-stranded antiparallel beta-sheet and two alpha helices packed in an alpha-beta sandwich fold []. This fold is common to other domains and is classified as "ferredoxin-like".; GO: 0046872 metal ion binding, 0030001 metal ion transport; PDB: 2VOY_A 1P6T_A 1KQK_A 2RML_A 1JWW_A 3K7R_F 1FES_A 1CC8_A 1FD8_A 2GGP_A ....

>KOG1603 consensus Copper chaperone [Inorganic ion transport and metabolism]

Probab=99.32  E-value=6.4e-12  Score=95.86  Aligned_cols=67  Identities=43%  Similarity=0.849  Sum_probs=62.6

Q ss_pred             CceEEEEEEeecchhhHHHHHHHhhccCCcceeEEecCCCEEEEEecCCHHHHHHHHHhh--cCeeECC
Q 022356          212 SNQVVVLRVSLHCKGCEGKVRKHLSRMKGVSSFNIDFAAKKVTVVGDVTPLSVLASISKV--KNAQFWP  278 (298)
Q Consensus       212 ~mqtVvLkVgM~C~gCa~KIeKAL~kIeGVesV~VDl~skkVtV~G~vdp~eLlkaL~Kl--K~Aelwp  278 (298)
                      .+++.+++|+|+|.+|+.+|++.|..++||.++.+|..+++|+|.|.+++..|++.|++.  +.+++|.
T Consensus         3 ~~~~~v~kv~~~C~gc~~kV~~~l~~~~GV~~v~id~~~~kvtV~g~~~p~~vl~~l~k~~~k~~~~~~   71 (73)
T KOG1603|consen    3 PIKTVVLKVNMHCEGCARKVKRVLQKLKGVESVDIDIKKQKVTVKGNVDPVKLLKKLKKTGGKRAELWK   71 (73)
T ss_pred             CccEEEEEECcccccHHHHHHHHhhccCCeEEEEecCCCCEEEEEEecCHHHHHHHHHhcCCCceEEec
Confidence            567889999999999999999999999999999999999999999999999999999986  6777774

>COG2608 CopZ Copper chaperone [Inorganic ion transport and metabolism]

Probab=99.26  E-value=2e-11  Score=92.98  Aligned_cols=65  Identities=23%  Similarity=0.387  Sum_probs=57.5

Q ss_pred             ceEEEEEE-eecchhhHHHHHHHhhccCCcceeEEecCCCEEEEE--e-cCCHHHHHHHHHhh-cCeeEC
Q 022356          213 NQVVVLRV-SLHCKGCEGKVRKHLSRMKGVSSFNIDFAAKKVTVV--G-DVTPLSVLASISKV-KNAQFW  277 (298)
Q Consensus       213 mqtVvLkV-gM~C~gCa~KIeKAL~kIeGVesV~VDl~skkVtV~--G-~vdp~eLlkaL~Kl-K~Aelw  277 (298)
                      |++.+|+| ||+|++|+.+|+++|.+++||..|+||++.+.+.|.  + .++.++|.++|+++ |.+..+
T Consensus         1 ~~~~~l~v~~MtC~~C~~~V~~al~~v~gv~~v~v~l~~~~~~V~~d~~~~~~~~i~~ai~~aGy~~~~~   70 (71)
T COG2608           1 MMKTTLKVEGMTCGHCVKTVEKALEEVDGVASVDVDLEKGTATVTFDSNKVDIEAIIEAIEDAGYKVEEI   70 (71)
T ss_pred             CceEEEEECCcCcHHHHHHHHHHHhcCCCeeEEEEEcccCeEEEEEcCCcCCHHHHHHHHHHcCCCeeec
Confidence            56789999 999999999999999999999999999999777766  4 47999999999997 877553

>KOG4656 consensus Copper chaperone for superoxide dismutase [Inorganic ion transport and metabolism]

Probab=98.77  E-value=2.1e-08  Score=92.21  Aligned_cols=68  Identities=21%  Similarity=0.421  Sum_probs=62.7

Q ss_pred             CceEEEEEEeecchhhHHHHHHHhhccCCcceeEEecCCCEEEEEecCCHHHHHHHHHhh-cCeeECCC
Q 022356          212 SNQVVVLRVSLHCKGCEGKVRKHLSRMKGVSSFNIDFAAKKVTVVGDVTPLSVLASISKV-KNAQFWPA  279 (298)
Q Consensus       212 ~mqtVvLkVgM~C~gCa~KIeKAL~kIeGVesV~VDl~skkVtV~G~vdp~eLlkaL~Kl-K~Aelwp~  279 (298)
                      ..-+++|.|.|+|++|+..|+.+|..++||++|+||++++.|.|.+.+.+.+|.+.|+.. ++|.|...
T Consensus         5 ~~~~~efaV~M~cescvnavk~~L~~V~Gi~~vevdle~q~v~v~ts~p~s~i~~~le~tGr~Avl~G~   73 (247)
T KOG4656|consen    5 DTYEAEFAVQMTCESCVNAVKACLKGVPGINSVEVDLEQQIVSVETSVPPSEIQNTLENTGRDAVLRGA   73 (247)
T ss_pred             CceeEEEEEechhHHHHHHHHHHhccCCCcceEEEEhhhcEEEEEccCChHHHHHHHHhhChheEEecC
Confidence            345789999999999999999999999999999999999999999999999999999998 88877543

>PRK10671 copA copper exporting ATPase; Provisional

Probab=98.28  E-value=1.7e-06  Score=91.38  Aligned_cols=64  Identities=19%  Similarity=0.389  Sum_probs=57.1

Q ss_pred             CceEEEEEE-eecchhhHHHHHHHhhccCCcceeEEecCCCEEEEEecCCHHHHHHHHHhh-cCeeEC
Q 022356          212 SNQVVVLRV-SLHCKGCEGKVRKHLSRMKGVSSFNIDFAAKKVTVVGDVTPLSVLASISKV-KNAQFW  277 (298)
Q Consensus       212 ~mqtVvLkV-gM~C~gCa~KIeKAL~kIeGVesV~VDl~skkVtV~G~vdp~eLlkaL~Kl-K~Aelw  277 (298)
                      ++++++|+| ||+|++|+.+|+++|.+++||..|.||+.  +++|++..+++.+.++|++. |.+++.
T Consensus         1 ~~~~~~l~V~gmtC~~C~~~i~~al~~~~gv~~v~v~~~--~~~v~~~~~~~~i~~~i~~~Gy~~~~~   66 (834)
T PRK10671          1 MSQTIDLTLDGLSCGHCVKRVKESLEQRPDVEQADVSIT--EAHVTGTASAEALIETIKQAGYDASVS   66 (834)
T ss_pred             CCeEEEEEECCcccHHHHHHHHHHHhcCCCcceEEEeee--EEEEEecCCHHHHHHHHHhcCCccccc
Confidence            357899999 99999999999999999999999999994  56677778999999999997 888764

>PLN02957 copper, zinc superoxide dismutase

Probab=98.25  E-value=7.3e-06  Score=75.36  Aligned_cols=71  Identities=20%  Similarity=0.474  Sum_probs=63.6

Q ss_pred             CceEEEEEEeecchhhHHHHHHHhhccCCcceeEEecCCCEEEEEecCCHHHHHHHHHhh-cCeeECCCCcc
Q 022356          212 SNQVVVLRVSLHCKGCEGKVRKHLSRMKGVSSFNIDFAAKKVTVVGDVTPLSVLASISKV-KNAQFWPAAAA  282 (298)
Q Consensus       212 ~mqtVvLkVgM~C~gCa~KIeKAL~kIeGVesV~VDl~skkVtV~G~vdp~eLlkaL~Kl-K~Aelwp~~~~  282 (298)
                      ..+++.|.|+|+|+.|+.+|+++|.+++||..+.+|+..++++|.+......+.++|++. |.++++.....
T Consensus         4 ~~~~~~~~VgMsC~~Ca~~Iek~L~~~~GV~~v~vn~~~~~v~V~~~~~~~~I~~aIe~~Gy~a~~~~~~~~   75 (238)
T PLN02957          4 PELLTEFMVDMKCEGCVAAVKNKLETLEGVKAVEVDLSNQVVRVLGSSPVKAMTAALEQTGRKARLIGQGDP   75 (238)
T ss_pred             CcEEEEEEECccCHHHHHHHHHHHhcCCCeEEEEEEcCCCEEEEEecCCHHHHHHHHHHcCCcEEEecCCCc
Confidence            456788999999999999999999999999999999999999999888889999999998 88988865433

>TIGR00003 copper ion binding protein

Probab=97.72  E-value=0.00038  Score=45.39  Aligned_cols=59  Identities=25%  Similarity=0.475  Sum_probs=48.9

Q ss_pred             ceEEEEEE-eecchhhHHHHHHHhhccCCcceeEEecCCCEEEEEec---CCHHHHHHHHHhh
Q 022356          213 NQVVVLRV-SLHCKGCEGKVRKHLSRMKGVSSFNIDFAAKKVTVVGD---VTPLSVLASISKV  271 (298)
Q Consensus       213 mqtVvLkV-gM~C~gCa~KIeKAL~kIeGVesV~VDl~skkVtV~G~---vdp~eLlkaL~Kl  271 (298)
                      |++..|.| +|+|..|+..|++.+..++||..+.+++..+.+.|...   .+...+...+...
T Consensus         1 ~~~~~~~v~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   63 (68)
T TIGR00003         1 KQKFTVQVMSMTCQHCVDKIEKFVGELEGVSKVQVKLEKASVKVEFDAPQATEICIAEAILDA   63 (68)
T ss_pred             CcEEEEEECCeEcHHHHHHHHHHHhcCCCEEEEEEEcCCCEEEEEeCCCCCCHHHHHHHHHHc
Confidence            35667999 99999999999999999999999999999999988742   4666666666543

This model describes an apparently copper-specific subfamily of the metal-binding domain HMA (Pfam family pfam00403). Closely related sequences outside this model include mercury resistance proteins and repeated domains of eukaryotic eukaryotic copper transport proteins. Members of this family are strictly prokaryotic. The model identifies both small proteins consisting of just this domain and N-terminal regions of cation (probably copper) transporting ATPases.

>COG2217 ZntA Cation transport ATPase [Inorganic ion transport and metabolism]

Probab=97.71  E-value=7.6e-05  Score=78.82  Aligned_cols=62  Identities=27%  Similarity=0.592  Sum_probs=54.6

Q ss_pred             eEEEEEE-eecchhhHHHHHHHhhccCCcceeEEecCCCEEEEEec---CC-HHHHHHHHHhh-cCeeE
Q 022356          214 QVVVLRV-SLHCKGCEGKVRKHLSRMKGVSSFNIDFAAKKVTVVGD---VT-PLSVLASISKV-KNAQF  276 (298)
Q Consensus       214 qtVvLkV-gM~C~gCa~KIeKAL~kIeGVesV~VDl~skkVtV~G~---vd-p~eLlkaL~Kl-K~Ael  276 (298)
                      .++.|.| ||+|..|+.+|| +|.+++||+.+.||+.++++.|..+   .+ .+++..+++.. |.+..
T Consensus         2 ~~~~l~v~Gm~Ca~C~~~ie-~l~~~~gV~~~~vn~~t~~~~v~~~~~~~~~~~~~~~~v~~~gy~~~~   69 (713)
T COG2217           2 RETSLSVEGMTCAACASRIE-ALNKLPGVEEARVNLATERATVVYDPEEVDLPADIVAAVEKAGYSARL   69 (713)
T ss_pred             ceeEEeecCcCcHHHHHHHH-HHhcCCCeeEEEeecccceEEEEecccccccHHHHHHHHHhcCccccc
Confidence            4678999 999999999999 9999999999999999999999854   45 78899999987 76643

>PRK10671 copA copper exporting ATPase; Provisional

Probab=96.78  E-value=0.0034  Score=66.79  Aligned_cols=64  Identities=20%  Similarity=0.460  Sum_probs=55.6

Q ss_pred             eEEEEEE-eecchhhHHHHHHHhhccCCcceeEEecCCCEEEEEecCCHHHHHHHHHhh-cCeeEC
Q 022356          214 QVVVLRV-SLHCKGCEGKVRKHLSRMKGVSSFNIDFAAKKVTVVGDVTPLSVLASISKV-KNAQFW  277 (298)
Q Consensus       214 qtVvLkV-gM~C~gCa~KIeKAL~kIeGVesV~VDl~skkVtV~G~vdp~eLlkaL~Kl-K~Aelw  277 (298)
                      ..+.|.| ||+|.+|+..|++.|..++||..+.+++..+++.|.+..++..+.+.++.. |.+.++
T Consensus        99 ~~~~l~V~Gm~Ca~Ca~~Ie~~L~~~~GV~~a~vnl~t~~~~V~~~~s~~~I~~~I~~~Gy~a~~~  164 (834)
T PRK10671         99 DSQQLLLSGMSCASCVSRVQNALQSVPGVTQARVNLAERTALVMGSASPQDLVQAVEKAGYGAEAI  164 (834)
T ss_pred             ceEEEEeCCcCcHHHHHHHHHHHhcCCCceeeeeecCCCeEEEEccCCHHHHHHHHHhcCCCcccc
Confidence            3577889 999999999999999999999999999999999988767888888888876 766544

>KOG0207 consensus Cation transport ATPase [Inorganic ion transport and metabolism]

Probab=96.75  E-value=0.0036  Score=67.79  Aligned_cols=64  Identities=30%  Similarity=0.550  Sum_probs=57.5

Q ss_pred             eEEEEEE-eecchhhHHHHHHHhhccCCcceeEEecCCCEEEEEec---CCHHHHHHHHHhh-cCeeEC
Q 022356          214 QVVVLRV-SLHCKGCEGKVRKHLSRMKGVSSFNIDFAAKKVTVVGD---VTPLSVLASISKV-KNAQFW  277 (298)
Q Consensus       214 qtVvLkV-gM~C~gCa~KIeKAL~kIeGVesV~VDl~skkVtV~G~---vdp~eLlkaL~Kl-K~Aelw  277 (298)
                      ++++|.| ||.|.+|+.+|++.|.+++||+++.++..++++.|..+   +.+-.+++.|+.. +.+.+.
T Consensus       146 ~~i~L~v~g~~c~s~~~~ie~~l~~l~gV~~~sv~~~t~~~~V~~~~~~~~pr~i~k~ie~~~~~~~~~  214 (951)
T KOG0207|consen  146 QKIYLDVLGMTCASCVSKIESILERLRGVKSFSVSLATDTAIVVYDPEITGPRDIIKAIEETGFEASVR  214 (951)
T ss_pred             CcEEEEeecccccchhhhhHHHHhhccCeeEEEEeccCCceEEEecccccChHHHHHHHHhhcccceee
Confidence            7899999 99999999999999999999999999999999999864   6889999999886 555443

>PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional

Probab=96.10  E-value=0.017  Score=61.25  Aligned_cols=63  Identities=22%  Similarity=0.399  Sum_probs=50.4

Q ss_pred             ceEEEEEE-eecchhhHHHHHHHhhccCCcceeEEecCCCEEEEEecC-CHHHHHHHHHhh-cCee
Q 022356          213 NQVVVLRV-SLHCKGCEGKVRKHLSRMKGVSSFNIDFAAKKVTVVGDV-TPLSVLASISKV-KNAQ  275 (298)
Q Consensus       213 mqtVvLkV-gM~C~gCa~KIeKAL~kIeGVesV~VDl~skkVtV~G~v-dp~eLlkaL~Kl-K~Ae  275 (298)
                      .+.+.|.| +|+|.+|+.+|+++|..++||..+.+++..+++.|..+. ..+.+.+.++.. |.+.
T Consensus        52 ~~r~~l~V~Gm~C~sCa~~Ie~aL~~~~GV~~v~Vn~at~k~~V~~d~~~~~~I~~aI~~~Gy~a~  117 (741)
T PRK11033         52 GTRYSWKVSGMDCPSCARKVENAVRQLAGVNQVQVLFATEKLVVDADNDIRAQVESAVQKAGFSLR  117 (741)
T ss_pred             CceEEEEECCCCcHHHHHHHHHHHhcCCCeeeEEEEcCCCeEEEEecccchHHHHHHHHhcccccc
Confidence            45677889 999999999999999999999999999999998887432 125566666665 6554

>KOG0207 consensus Cation transport ATPase [Inorganic ion transport and metabolism]

Probab=95.98  E-value=0.015  Score=63.11  Aligned_cols=64  Identities=27%  Similarity=0.483  Sum_probs=57.6

Q ss_pred             EEEEEE-eecchhhHHHHHHHhhccCCcceeEEecCCCEEEEEec---CCHHHHHHHHHhh-cCeeECC
Q 022356          215 VVVLRV-SLHCKGCEGKVRKHLSRMKGVSSFNIDFAAKKVTVVGD---VTPLSVLASISKV-KNAQFWP  278 (298)
Q Consensus       215 tVvLkV-gM~C~gCa~KIeKAL~kIeGVesV~VDl~skkVtV~G~---vdp~eLlkaL~Kl-K~Aelwp  278 (298)
                      +..|.| ||+|..|...|++.|+.++||+++.|-+...+.+|..+   ..++.+.+.+++. +.+++.-
T Consensus        70 ~~~l~v~GmtC~scv~~i~~~l~~~~gv~~~~val~~~~~~v~~dp~v~s~~~~~e~ie~~gf~a~~i~  138 (951)
T KOG0207|consen   70 KCYLSVNGMTCASCVATIERNLRKIEGVESAVVALSASKAEVIYDPAVTSPDSIAESIEDLGFSAELIE  138 (951)
T ss_pred             eeEEEecCceeHHHHHHHHHHhhccCCcceEEEEeeccceeEEECCcccCchhHHHHHHhcCccceehh
Confidence            778999 99999999999999999999999999999999999854   7889999999987 7777653

>TIGR02052 MerP mercuric transport protein periplasmic component

Probab=93.69  E-value=0.83  Score=33.04  Aligned_cols=62  Identities=23%  Similarity=0.349  Sum_probs=45.8

Q ss_pred             CCCceEEEEEE-eecchhhHHHHHHHhhccCCcceeEEecCCCEEEEEe---cCCHHHHHHHHHhh
Q 022356          210 PPSNQVVVLRV-SLHCKGCEGKVRKHLSRMKGVSSFNIDFAAKKVTVVG---DVTPLSVLASISKV  271 (298)
Q Consensus       210 ~~~mqtVvLkV-gM~C~gCa~KIeKAL~kIeGVesV~VDl~skkVtV~G---~vdp~eLlkaL~Kl  271 (298)
                      ++...++.+.+ +|.|..|...++..+...+||..+.+++....+.+..   ..+...+...+...
T Consensus        19 ~~~~~~~~~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (92)
T TIGR02052        19 WAATQTVTLEVPGMTCVACPITVETALQKVDGVSKAEVTFKTKLAVVTFDDEKTNVKALTEATTDA   84 (92)
T ss_pred             hhcceEEEEEECCeEcHHHHHHHHHHHhcCCCEEEEEEEecCCEEEEEECCCCCCHHHHHHHHHhc
Confidence            34444566778 9999999999999999999998888998888866652   23555554444443

This model represents the periplasmic mercury (II) binding protein of the bacterial mercury detoxification system which passes mercuric ion to the MerT transporter for subsequent reduction to Hg(0) by the mercuric reductase MerA. MerP contains a distinctive GMTCXXC motif associated with metal binding. MerP is related to a larger family of metal binding proteins (pfam00403).

>cd00371 HMA Heavy-metal-associated domain (HMA) is a conserved domain of approximately 30 amino acid residues found in a number of proteins that transport or detoxify heavy metals, for example, the CPx-type heavy metal ATPases and copper chaperones

Probab=81.25  E-value=8  Score=22.10  Aligned_cols=39  Identities=36%  Similarity=0.667  Sum_probs=31.9

Q ss_pred             EE-eecchhhHHHHHHHhhccCCcceeEEecCCCEEEEEe
Q 022356          219 RV-SLHCKGCEGKVRKHLSRMKGVSSFNIDFAAKKVTVVG  257 (298)
Q Consensus       219 kV-gM~C~gCa~KIeKAL~kIeGVesV~VDl~skkVtV~G  257 (298)
                      .+ +|.|..|...++..+....|+....+++....+.+..
T Consensus         3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   42 (63)
T cd00371           3 SVEGMTCAGCVSKIEKALEKLPGVESVEVDLETGKATVEY   42 (63)
T ss_pred             eECCeEcHHHHHHHHHHHhcCCCEeEEEEEccCCEEEEEE
Confidence            35 8899999999999998899988777887777766654

HMA domain contains two cysteine residues that are important in binding and transfer of metal ions, such as copper, cadmium, cobalt and zinc. In the case of copper, stoichiometry of binding is one Cu+ ion per binding domain. Repeats of the HMA domain in copper chaperone has been associated with Menkes/Wilson disease due to binding of multiple copper ions.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	298
2crl_A	98	Copper chaperone for superoxide dismutase; SOD1, f	1e-18
3iwl_A	68	Copper transport protein ATOX1; beta-alpha-beta-BE	2e-15
1cc8_A	73	Protein (metallochaperone ATX1); copper transport,	3e-14
1qup_A	222	Superoxide dismutase 1 copper chaperone; two domai	2e-12
1jk9_B	249	CCS, copper chaperone for superoxide dismutase; pr	2e-11
2rop_A	202	Copper-transporting ATPase 2; wilson protein, mobi	1e-09
2rop_A	202	Copper-transporting ATPase 2; wilson protein, mobi	7e-07
2k2p_A	85	Uncharacterized protein ATU1203; putative metal-bi	9e-08
2kkh_A	95	Putative heavy metal transporter; zinc transport,	5e-07
1osd_A	72	MERP, hypothetical protein MERP; mercury resistanc	7e-07
2ew9_A	149	Copper-transporting ATPase 2; copper trafficking,	2e-06
2ew9_A	149	Copper-transporting ATPase 2; copper trafficking,	1e-05
2qif_A	69	Copper chaperone COPZ; tetranuclear Cu(I) cluster;	3e-06
1p6t_A	151	Potential copper-transporting ATPase; COPA, P-type	3e-06
1p6t_A	151	Potential copper-transporting ATPase; COPA, P-type	4e-05
2roe_A	66	Heavy metal binding protein; NMR {Thermus thermoph	3e-06
2aj0_A	71	Probable cadmium-transporting ATPase; ferrodoxin-l	3e-06
2g9o_A	90	Copper-transporting ATPase 1; menkes disease, solu	6e-06
1kvi_A	79	Copper-transporting ATPase 1; menkes, Cu-protein,	6e-06
1y3j_A	77	Copper-transporting ATPase 1; ferrodoxin-like fold	7e-06
2xmm_A	64	SSR2857 protein, ATX1; metal transport, copper hom	9e-06
3cjk_B	75	Copper-transporting ATPase 1; HAH1, ATP7B, menkes	1e-05
2l3m_A	71	Copper-ION-binding protein; structural genomics, c	1e-05
1yg0_A	66	COP associated protein; open-faced beta-sandwich,	2e-05
1aw0_A	72	Menkes copper-transporting ATPase; copper-binding	2e-05
1cpz_A	68	Protein (COPZ); copper chaperone, metal transport,	3e-05
1mwy_A	73	ZNTA; open-faced beta-sandwich fold, beta-alpha-be	3e-05
1yjr_A	75	Copper-transporting ATPase 1; metallochaperone, pr	5e-05
2ldi_A	71	Zinc-transporting ATPase; metal homeostasis, metal	6e-05
2ofg_X	111	Zinc-transporting ATPase; ferredoxin-like fold, be	7e-05
1opz_A	76	Potential copper-transporting ATPase; mutation, fo	1e-04
2xmw_A	71	PACS-N, cation-transporting ATPase PACS; hydrolase	3e-04
2kt2_A	69	Mercuric reductase; nmera, MERA, HMA domain, mercu	3e-04
1jww_A	80	Potential copper-transporting ATPase; beta-alpha-b	4e-04

>2crl_A Copper chaperone for superoxide dismutase; SOD1, familial ALS, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 98

 Score = 78.3 bits (193), Expect = 1e-18
 Identities = 17/97 (17%), Positives = 33/97 (34%), Gaps = 1/97 (1%)

Query: 197 AAKSPSSSSRSEKPPSNQVVVLRVSLHCKGCEGKVRKHLSRMKGVSSFNIDFAAKKVTVV 256
           ++ S   +S S    +   +   V + C+ C   VRK L  + GV    +    + V V 
Sbjct: 2   SSGSSGMASDSGNQGTLCTLEFAVQMTCQSCVDAVRKSLQGVAGVQDVEVHLEDQMVLVH 61

Query: 257 GDVTPLSVLASISKV-KNAQFWPAAAAATSPASAPAA 292
             +    V A +    + A      +     +   + 
Sbjct: 62  TTLPSQEVQALLEGTGRQAVLKGMGSGQLQNSGPSSG 98

>3iwl_A Copper transport protein ATOX1; beta-alpha-beta-BETA-alpha-beta, cisplatin, platinum, chaperone, ION transport, metal-binding, metal transport; HET: TCE; 1.60A {Homo sapiens} PDB: 1fe4_A* 1fee_A* 1tl4_A 1tl5_A 2k1r_B 1fe0_A* 3iwx_A 3cjk_A Length = 68

 Score = 68.6 bits (168), Expect = 2e-15
 Identities = 17/63 (26%), Positives = 32/63 (50%), Gaps = 2/63 (3%)

Query: 216 VVLRVSLHCKGCEGKVRKHLSRMKGVSSFNIDFAAKKVTVVGDVTPLSVLASISKV-KNA 274
               V + C GC   V + L+++ GV  ++ID   KKV +  + +  ++LA++ K  K  
Sbjct: 4   HEFSVDMTCGGCAEAVSRVLNKLGGV-KYDIDLPNKKVCIESEHSMDTLLATLKKTGKTV 62

Query: 275 QFW 277
            + 
Sbjct: 63  SYL 65

>1cc8_A Protein (metallochaperone ATX1); copper transport, mercury coordination, metal transport; 1.02A {Saccharomyces cerevisiae} SCOP: d.58.17.1 PDB: 1cc7_A 1fd8_A 1fes_A 2ggp_A 3k7r_A Length = 73

 Score = 65.6 bits (160), Expect = 3e-14
 Identities = 16/60 (26%), Positives = 26/60 (43%), Gaps = 1/60 (1%)

Query: 212 SNQVVVLRVSLHCKGCEGKVRKHLSRMK-GVSSFNIDFAAKKVTVVGDVTPLSVLASISK 270
             +     V + C GC G V K L++++  VS  +I    + V V   +    +L  I K
Sbjct: 3   EIKHYQFNVVMTCSGCSGAVNKVLTKLEPDVSKIDISLEKQLVDVYTTLPYDFILEKIKK 62

>1qup_A Superoxide dismutase 1 copper chaperone; two domains, beta-alpha-beta-BETA-alpha-beta and beta barrel; 1.80A {Saccharomyces cerevisiae} SCOP: b.1.8.1 d.58.17.1 Length = 222

 Score = 64.3 bits (156), Expect = 2e-12
 Identities = 16/79 (20%), Positives = 35/79 (44%), Gaps = 1/79 (1%)

Query: 216 VVLRVSLHCKGCEGKVRKHLSRMKGVSSFNIDFAAKKVTVVGDVTPLSVLASISKV-KNA 274
               + +HC+ C   ++  L  + G++S N D   + ++V   V P +++ ++    K+A
Sbjct: 8   ATYAIPMHCENCVNDIKACLKNVPGINSLNFDIEQQIMSVESSVAPSTIINTLRNCGKDA 67

Query: 275 QFWPAAAAATSPASAPAAF 293
               A    +S  +    F
Sbjct: 68  IIRGAGKPNSSAVAILETF 86

>1jk9_B CCS, copper chaperone for superoxide dismutase; protein-protein complex, heterodimer, metallochaperone, amyotrophic lateral sclerosis; 2.90A {Saccharomyces cerevisiae} SCOP: b.1.8.1 d.58.17.1 Length = 249

 Score = 61.7 bits (149), Expect = 2e-11
 Identities = 11/55 (20%), Positives = 27/55 (49%)

Query: 216 VVLRVSLHCKGCEGKVRKHLSRMKGVSSFNIDFAAKKVTVVGDVTPLSVLASISK 270
               + +HC+ C   ++  L  + G++S N D   + ++V   V P +++ ++  
Sbjct: 9   ATYAIPMHCENCVNDIKACLKNVPGINSLNFDIEQQIMSVESSVAPSTIINTLRN 63

>2rop_A Copper-transporting ATPase 2; wilson protein, mobility, protein-protein interaction, alternative splicing, ATP-binding, copper transport cytoplasm; NMR {Homo sapiens} Length = 202

 Score = 56.2 bits (135), Expect = 1e-09
 Identities = 17/104 (16%), Positives = 39/104 (37%), Gaps = 4/104 (3%)

Query: 195 SSAAKSPSSSSRSEKPPSNQVVVLRVS-LHCKGCEGKVRKHLSRMKGVSSFNIDFAAKKV 253
           S+     +S +   +      + LR+  +HCK C   + +++ ++ GV S  +    K  
Sbjct: 1   SANQNFNNSETLGHQGSHVVTLQLRIDGMHCKSCVLNIEENIGQLLGVQSIQVSLENKTA 60

Query: 254 TVVGD---VTPLSVLASISKVKNAQFWPAAAAATSPASAPAAFP 294
            V  D    +P+++  +I  +    F  +       +       
Sbjct: 61  QVKYDPSCTSPVALQRAIEALPPGNFKVSLPDGAEGSGTDHRSS 104

>2rop_A Copper-transporting ATPase 2; wilson protein, mobility, protein-protein interaction, alternative splicing, ATP-binding, copper transport cytoplasm; NMR {Homo sapiens} Length = 202

 Score = 48.1 bits (114), Expect = 7e-07
 Identities = 20/113 (17%), Positives = 50/113 (44%), Gaps = 2/113 (1%)

Query: 181 TGPEKTSTLINGDDSSAAKSPSSSSRSEKPPSNQVVVLRVS-LHCKGCEGKVRKHLSRMK 239
           + P+          SS++ SP S  R++   +    ++ ++ + C  C   +   +S+++
Sbjct: 89  SLPDGAEGSGTDHRSSSSHSPGSPPRNQVQGTCSTTLIAIAGMTCASCVHSIEGMISQLE 148

Query: 240 GVSSFNIDFAAKKVTVVGDVTPLSVLASISKVKNAQFWPAAAAATSPASAPAA 292
           GV   ++  A    TV+ +   +S     + +++  F  A+  + S ++ P  
Sbjct: 149 GVQQISVSLAEGTATVLYNPAVISPEELRAAIEDMGF-EASVVSESCSTNPLG 200

>2k2p_A Uncharacterized protein ATU1203; putative metal-binding domain ATU1203, ontario centre for ST proteomics, structural genomics; NMR {Agrobacterium tumefaciens str} Length = 85

 Score = 47.9 bits (114), Expect = 9e-08
 Identities = 15/77 (19%), Positives = 28/77 (36%), Gaps = 1/77 (1%)

Query: 195 SSAAKSPSSSSRSEKPPSNQVVVLRVS-LHCKGCEGKVRKHLSRMKGVSSFNIDFAAKKV 253
           SS      SS R         +   V  + C  C G ++  + +    ++ + D A++ V
Sbjct: 3   SSHHHHHHSSGRENLYFQGAGLSFHVEDMTCGHCAGVIKGAIEKTVPGAAVHADPASRTV 62

Query: 254 TVVGDVTPLSVLASISK 270
            V G      +   I+ 
Sbjct: 63  VVGGVSDAAHIAEIITA 79

>2kkh_A Putative heavy metal transporter; zinc transport, metal binding, metal selectivity, ferredoxin fold, ATP-binding, hydrolase; NMR {Arabidopsis thaliana} Length = 95

 Score = 45.9 bits (109), Expect = 5e-07
 Identities = 13/76 (17%), Positives = 26/76 (34%), Gaps = 1/76 (1%)

Query: 202 SSSSRSEKPPSNQVVVLRVS-LHCKGCEGKVRKHLSRMKGVSSFNIDFAAKKVTVVGDVT 260
           +     +K    Q     V  + C      +   L  + GV  +++   ++ V VV D  
Sbjct: 4   NKEEEKKKVKKLQKSYFDVLGICCTSEVPIIENILKSLDGVKEYSVIVPSRTVIVVHDSL 63

Query: 261 PLSVLASISKVKNAQF 276
            +S       +  A+ 
Sbjct: 64  LISPFQIAKALNEARL 79

>1osd_A MERP, hypothetical protein MERP; mercury resistance, metal binding protein, perisplasm, structural genomics; 2.00A {Cupriavidus metallidurans} SCOP: d.58.17.1 PDB: 1afi_A 1afj_A 2hqi_A Length = 72

 Score = 45.0 bits (107), Expect = 7e-07
 Identities = 18/64 (28%), Positives = 30/64 (46%), Gaps = 1/64 (1%)

Query: 212 SNQVVVLRVS-LHCKGCEGKVRKHLSRMKGVSSFNIDFAAKKVTVVGDVTPLSVLASISK 270
           + Q V L V  + C  C   V+K +S+++GVS  ++ F  ++  V  D    SV      
Sbjct: 1   ATQTVTLSVPGMTCSACPITVKKAISKVEGVSKVDVTFETRQAVVTFDDAKTSVQKLTKA 60

Query: 271 VKNA 274
             +A
Sbjct: 61  TADA 64

>2ew9_A Copper-transporting ATPase 2; copper trafficking, ferrodoxin-like fold, structural genomics, structural proteomics in europe, spine, hydrolase; NMR {Homo sapiens} Length = 149

 Score = 46.2 bits (110), Expect = 2e-06
 Identities = 14/83 (16%), Positives = 30/83 (36%), Gaps = 1/83 (1%)

Query: 212 SNQVVVLRVS-LHCKGCEGKVRKHLSRMKGVSSFNIDFAAKKVTVVGDVTPLSVLASISK 270
           + Q   L++  + C  C   + ++L +  GV S  +   A K  +  D   +  L     
Sbjct: 2   APQKCFLQIKGMTCASCVSNIERNLQKEAGVLSVLVALMAGKAEIKYDPEVIQPLEIAQF 61

Query: 271 VKNAQFWPAAAAATSPASAPAAF 293
           +++  F  A     + +      
Sbjct: 62  IQDLGFEAAVMEDYAGSDGNIEL 84

>2ew9_A Copper-transporting ATPase 2; copper trafficking, ferrodoxin-like fold, structural genomics, structural proteomics in europe, spine, hydrolase; NMR {Homo sapiens} Length = 149

 Score = 43.5 bits (103), Expect = 1e-05
 Identities = 12/69 (17%), Positives = 27/69 (39%), Gaps = 1/69 (1%)

Query: 207 SEKPPSNQVVVLRVS-LHCKGCEGKVRKHLSRMKGVSSFNIDFAAKKVTVVGDVTPLSVL 265
            +   S+  + L ++ + C  C   +   L+R  G++  ++  A  K  V  D   +   
Sbjct: 73  EDYAGSDGNIELTITGMTCASCVHNIESKLTRTNGITYASVALATSKALVKFDPEIIGPR 132

Query: 266 ASISKVKNA 274
             I  ++  
Sbjct: 133 DIIKIIEEI 141

>2qif_A Copper chaperone COPZ; tetranuclear Cu(I) cluster; 1.50A {Bacillus subtilis} SCOP: d.58.17.1 PDB: 3i9z_A 1k0v_A 1p8g_A Length = 69

 Score = 43.4 bits (103), Expect = 3e-06
 Identities = 15/60 (25%), Positives = 28/60 (46%), Gaps = 1/60 (1%)

Query: 216 VVLRVS-LHCKGCEGKVRKHLSRMKGVSSFNIDFAAKKVTVVGDVTPLSVLASISKVKNA 274
             L+V  + C+ C   V   +  + GVS+ +++  A KV V  D   +SV      +++ 
Sbjct: 4   KTLQVEGMSCQHCVKAVETSVGELDGVSAVHVNLEAGKVDVSFDADKVSVKDIADAIEDQ 63

>1p6t_A Potential copper-transporting ATPase; COPA, P-type ATPase, water-soluble region, beta-alpha-beta- beta-alpha-beta fold; NMR {Bacillus subtilis} SCOP: d.58.17.1 d.58.17.1 PDB: 2rml_A Length = 151

 Score = 45.1 bits (107), Expect = 3e-06
 Identities = 17/66 (25%), Positives = 32/66 (48%), Gaps = 1/66 (1%)

Query: 212 SNQVVVLRVS-LHCKGCEGKVRKHLSRMKGVSSFNIDFAAKKVTVVGDVTPLSVLASISK 270
             + + ++VS + C  C  ++ K L RM GV+  N++ A + V V+ D       A   K
Sbjct: 4   EQKEIAMQVSGMTCAACAARIEKGLKRMPGVTDANVNLATETVNVIYDPAETGTAAIQEK 63

Query: 271 VKNAQF 276
           ++   +
Sbjct: 64  IEKLGY 69

>1p6t_A Potential copper-transporting ATPase; COPA, P-type ATPase, water-soluble region, beta-alpha-beta- beta-alpha-beta fold; NMR {Bacillus subtilis} SCOP: d.58.17.1 d.58.17.1 PDB: 2rml_A Length = 151

 Score = 42.0 bits (99), Expect = 4e-05
 Identities = 14/66 (21%), Positives = 29/66 (43%), Gaps = 1/66 (1%)

Query: 210 PPSNQVVVLRVS-LHCKGCEGKVRKHLSRMKGVSSFNIDFAAKKVTVVGDVTPLSVLASI 268
               +     +  + C  C  ++ K L++++GV++  ++FA + VTV  +    SV    
Sbjct: 70  HVVTEKAEFDIEGMTCAACANRIEKRLNKIEGVANAPVNFALETVTVEYNPKEASVSDLK 129

Query: 269 SKVKNA 274
             V   
Sbjct: 130 EAVDKL 135

>2roe_A Heavy metal binding protein; NMR {Thermus thermophilus} PDB: 2rog_A Length = 66

 Score = 43.0 bits (102), Expect = 3e-06
 Identities = 12/57 (21%), Positives = 26/57 (45%), Gaps = 1/57 (1%)

Query: 215 VVVLRVS-LHCKGCEGKVRKHLSRMKGVSSFNIDFAAKKVTVVGDVTPLSVLASISK 270
           ++ L+V  + C  C   V K L ++ GV    +     +  V G   P +++ ++ +
Sbjct: 1   MLKLKVEGMTCNHCVMAVTKALKKVPGVEKVEVSLEKGEALVEGTADPKALVQAVEE 57

>2aj0_A Probable cadmium-transporting ATPase; ferrodoxin-like fold, beta-alpha-beta-BETA-alpha-beta, metal binding protein, hydrolase; NMR {Listeria monocytogenes} PDB: 2aj1_A Length = 71

 Score = 43.2 bits (102), Expect = 3e-06
 Identities = 15/45 (33%), Positives = 26/45 (57%), Gaps = 1/45 (2%)

Query: 217 VLRVS-LHCKGCEGKVRKHLSRMKGVSSFNIDFAAKKVTVVGDVT 260
           V RV  L C  C  K  +++  ++GV+   ++F A K+TV G+ +
Sbjct: 6   VYRVDGLSCTNCAAKFERNVKEIEGVTEAIVNFGASKITVTGEAS 50

>2g9o_A Copper-transporting ATPase 1; menkes disease, solution structure, structural genomics, structural proteomics in europe, spine, hydrolase; NMR {Homo sapiens} PDB: 2ga7_A Length = 90

 Score = 43.2 bits (102), Expect = 6e-06
 Identities = 17/64 (26%), Positives = 29/64 (45%), Gaps = 4/64 (6%)

Query: 212 SNQVVVLRVS-LHCKGCEGKVRKHLSRMKGVSSFNIDFAAKKVTVVGD---VTPLSVLAS 267
           ++      +  +HCK C   +   LS ++ VSS  +    +   VV +   VTP S+  +
Sbjct: 1   NDSTATFIIDGMHCKSCVSNIESTLSALQYVSSIVVSLENRSAIVVYNASSVTPESLRKA 60

Query: 268 ISKV 271
           I  V
Sbjct: 61  IEAV 64

>1kvi_A Copper-transporting ATPase 1; menkes, Cu-protein, hydrolase; NMR {Homo sapiens} SCOP: d.58.17.1 PDB: 1kvj_A Length = 79

 Score = 42.7 bits (101), Expect = 6e-06
 Identities = 10/70 (14%), Positives = 24/70 (34%), Gaps = 1/70 (1%)

Query: 208 EKPPSNQVVVLRVS-LHCKGCEGKVRKHLSRMKGVSSFNIDFAAKKVTVVGDVTPLSVLA 266
           +       V + V  + C  C   + + + ++ GV    +    K  T++ D    +   
Sbjct: 2   DPSMGVNSVTISVEGMTCNSCVWTIEQQIGKVNGVHHIKVSLEEKNATIIYDPKLQTPKT 61

Query: 267 SISKVKNAQF 276
               + +  F
Sbjct: 62  LQEAIDDMGF 71

>1y3j_A Copper-transporting ATPase 1; ferrodoxin-like fold, beta-alpha-beta-BETA-alpha-beta structure, structural proteomics in europe, spine; NMR {Homo sapiens} PDB: 1y3k_A Length = 77

 Score = 42.3 bits (100), Expect = 7e-06
 Identities = 11/66 (16%), Positives = 27/66 (40%), Gaps = 1/66 (1%)

Query: 212 SNQVVVLRVS-LHCKGCEGKVRKHLSRMKGVSSFNIDFAAKKVTVVGDVTPLSVLASISK 270
           ++    ++V+ + C  C   + ++L R +G+ S  +   A K  V  +   +        
Sbjct: 1   NSSKCYIQVTGMTCASCVANIERNLRREEGIYSILVALMAGKAEVRYNPAVIQPPMIAEF 60

Query: 271 VKNAQF 276
           ++   F
Sbjct: 61  IRELGF 66

>2xmm_A SSR2857 protein, ATX1; metal transport, copper homeostasis, chaperone, P-type atpas; 1.65A {Synechocystis SP} PDB: 2xmv_A 1sb6_A 2xmj_A 2xmk_A 2xmt_A 2xmu_A Length = 64

 Score = 41.6 bits (98), Expect = 9e-06
 Identities = 10/47 (21%), Positives = 21/47 (44%)

Query: 224 CKGCEGKVRKHLSRMKGVSSFNIDFAAKKVTVVGDVTPLSVLASISK 270
           C+ C   V K +      ++  +D  +KKVT+   +    +  +I+ 
Sbjct: 12  CEACAEAVTKAVQNEDAQATVQVDLTSKKVTITSALGEEQLRTAIAS 58

>3cjk_B Copper-transporting ATPase 1; HAH1, ATP7B, menkes disease, metal homeostasis, chaperone, ION transport, metal- binding, alternative splicing; 1.80A {Homo sapiens} PDB: 2k1r_A Length = 75

 Score = 41.5 bits (98), Expect = 1e-05
 Identities = 10/64 (15%), Positives = 23/64 (35%), Gaps = 1/64 (1%)

Query: 214 QVVVLRVS-LHCKGCEGKVRKHLSRMKGVSSFNIDFAAKKVTVVGDVTPLSVLASISKVK 272
             V + V  + C  C   + + + ++ GV    +    K  T++ D    +       + 
Sbjct: 2   NSVTISVEGMTCNSCVWTIEQQIGKVNGVHHIKVSLEEKNATIIYDPKLQTPKTLQEAID 61

Query: 273 NAQF 276
           +  F
Sbjct: 62  DMGF 65

>2l3m_A Copper-ION-binding protein; structural genomics, center for structural genomics of infec diseases, csgid, metal binding protein; NMR {Bacillus anthracis} Length = 71

 Score = 41.5 bits (98), Expect = 1e-05
 Identities = 10/62 (16%), Positives = 27/62 (43%), Gaps = 1/62 (1%)

Query: 214 QVVVLRVS-LHCKGCEGKVRKHLSRMKGVSSFNIDFAAKKVTVVGDVTPLSVLASISKVK 272
           + + L+V  + C  C   +   +  + GV    +  A   V V  D + +++   ++ ++
Sbjct: 5   EQLTLQVEGMSCGHCVNAIESSVKELNGVEQVKVQLAEGTVEVTIDSSVVTLKDIVAVIE 64

Query: 273 NA 274
           + 
Sbjct: 65  DQ 66

>1yg0_A COP associated protein; open-faced beta-sandwich, missing C-terminal beta-sheet, Met transport; NMR {Helicobacter pylori} Length = 66

 Score = 41.1 bits (97), Expect = 2e-05
 Identities = 13/52 (25%), Positives = 22/52 (42%), Gaps = 1/52 (1%)

Query: 223 HCKGCEGKVRKHLSRMKGVSSFNIDFAAKKVTVVGDVTPLSVLASISKVKNA 274
            C  C  K+ K +  ++GVS  ++    K V V  D  P +       + +A
Sbjct: 11  TCNHCVDKIEKFVGEIEGVSFIDVSVEKKSVVVEFD-APATQDLIKEALLDA 61

>1aw0_A Menkes copper-transporting ATPase; copper-binding domain, hydrolase; NMR {Homo sapiens} SCOP: d.58.17.1 PDB: 2aw0_A Length = 72

 Score = 40.7 bits (96), Expect = 2e-05
 Identities = 14/64 (21%), Positives = 24/64 (37%), Gaps = 1/64 (1%)

Query: 214 QVVVLRVS-LHCKGCEGKVRKHLSRMKGVSSFNIDFAAKKVTVVGDVTPLSVLASISKVK 272
           Q  V+ +  + C  C   +   +S+  GV S  +  A    TV  D    S       ++
Sbjct: 3   QETVINIDGMTCNSCVQSIEGVISKKPGVKSIRVSLANSNGTVEYDPLLTSPETLRGAIE 62

Query: 273 NAQF 276
           +  F
Sbjct: 63  DMGF 66

>1cpz_A Protein (COPZ); copper chaperone, metal transport, gene regulation; NMR {Enterococcus hirae} SCOP: d.58.17.1 Length = 68

 Score = 40.3 bits (95), Expect = 3e-05
 Identities = 8/52 (15%), Positives = 17/52 (32%)

Query: 223 HCKGCEGKVRKHLSRMKGVSSFNIDFAAKKVTVVGDVTPLSVLASISKVKNA 274
            C  C  ++ + + R+ GV    +    +K  V  D   +        +   
Sbjct: 10  SCNHCVARIEEAVGRISGVKKVKVQLKKEKAVVKFDEANVQATEICQAINEL 61

>1mwy_A ZNTA; open-faced beta-sandwich fold, beta-alpha-beta-BETA-alpha- beta, hydrolase; NMR {Escherichia coli} SCOP: d.58.17.1 PDB: 1mwz_A Length = 73

 Score = 40.5 bits (95), Expect = 3e-05
 Identities = 16/64 (25%), Positives = 29/64 (45%), Gaps = 3/64 (4%)

Query: 212 SNQVVVLRVS-LHCKGCEGKVRKHLSRMKGVSSFNIDFAAKKVTVVGDVTPLSVLASISK 270
           S      +VS + C  C  KV   + ++ GV+   + FA +K+ V  D    + +   S 
Sbjct: 1   SGTRYSWKVSGMDCAACARKVENAVRQLAGVNQVQVLFATEKLVVDADNDIRAQV--ESA 58

Query: 271 VKNA 274
           ++ A
Sbjct: 59  LQKA 62

>1yjr_A Copper-transporting ATPase 1; metallochaperone, protein-protein interaction, copper(I), metal homeostasis, structural proteomics in europe, spine; NMR {Homo sapiens} PDB: 1yjt_A 1yju_A 1yjv_A Length = 75

 Score = 40.0 bits (94), Expect = 5e-05
 Identities = 13/66 (19%), Positives = 28/66 (42%), Gaps = 1/66 (1%)

Query: 212 SNQVVVLRVS-LHCKGCEGKVRKHLSRMKGVSSFNIDFAAKKVTVVGDVTPLSVLASISK 270
            + V+ L V  + C  C  K+   L++ +G+   ++  A  K  +  D   +     I  
Sbjct: 2   GDGVLELVVRGMTCASCVHKIESSLTKHRGILYCSVALATNKAHIKYDPEIIGPRDIIHT 61

Query: 271 VKNAQF 276
           +++  F
Sbjct: 62  IESLGF 67

>2ldi_A Zinc-transporting ATPase; metal homeostasis, metallochaperones, hydrolase; NMR {Synechocystis SP} Length = 71

 Score = 39.6 bits (93), Expect = 6e-05
 Identities = 13/62 (20%), Positives = 29/62 (46%), Gaps = 1/62 (1%)

Query: 214 QVVVLRVS-LHCKGCEGKVRKHLSRMKGVSSFNIDFAAKKVTVVGDVTPLSVLASISKVK 272
           +   ++V  + C  C   + + L R+KGV+  ++  A  ++TV  D   +S +    ++ 
Sbjct: 3   KTQQMQVGGMRCAACASSIERALERLKGVAEASVTVATGRLTVTYDPKQVSEITIQERIA 62

Query: 273 NA 274
             
Sbjct: 63  AL 64

>1opz_A Potential copper-transporting ATPase; mutation, folding, abbab fold, hydrolase; NMR {Bacillus subtilis} SCOP: d.58.17.1 PDB: 1oq3_A 1oq6_A Length = 76

 Score = 38.9 bits (91), Expect = 1e-04
 Identities = 17/64 (26%), Positives = 31/64 (48%), Gaps = 1/64 (1%)

Query: 212 SNQVVVLRVS-LHCKGCEGKVRKHLSRMKGVSSFNIDFAAKKVTVVGDVTPLSVLASISK 270
             + + ++VS + C  C  ++ K L RM GV+  N++ A + V V+ D       A   K
Sbjct: 4   EQKEIAMQVSGMTCAACAARIEKGLKRMPGVTDANVNLATETVNVIYDPAETGTAAIQEK 63

Query: 271 VKNA 274
           ++  
Sbjct: 64  IEKL 67

>2xmw_A PACS-N, cation-transporting ATPase PACS; hydrolase, Cu(I)-binding, trafficking; 1.80A {Synechocystis SP} PDB: 2gcf_A Length = 71

 Score = 37.3 bits (87), Expect = 3e-04
 Identities = 13/60 (21%), Positives = 33/60 (55%), Gaps = 3/60 (5%)

Query: 214 QVVVLRVS-LHCKGCEGKVRKHLSRMKGVSSFNIDFAAKK--VTVVGDVTPLSVLASISK 270
           Q + L++  + C  C   + + ++++ GV S  ++FA ++  V+  G+ TP  +  ++ +
Sbjct: 3   QTINLQLEGMRCAACASSIERAIAKVPGVQSCQVNFALEQAVVSYHGETTPQILTDAVER 62

>2kt2_A Mercuric reductase; nmera, MERA, HMA domain, mercuric resist metal-binding, oxidoreductase; NMR {Pseudomonas aeruginosa} PDB: 2kt3_A Length = 69

 Score = 37.3 bits (87), Expect = 3e-04
 Identities = 11/59 (18%), Positives = 30/59 (50%), Gaps = 3/59 (5%)

Query: 215 VVVLRVS-LHCKGCEGKVRKHLSRMKGVSSFNIDFAAKK--VTVVGDVTPLSVLASISK 270
           +  L+++ + C  C   V++ L ++ GV S  + +      + +V   +P ++ A+++ 
Sbjct: 1   MTHLKITGMTCDSCAAHVKEALEKVPGVQSALVSYPKGTAQLAIVPGTSPDALTAAVAG 59

>1jww_A Potential copper-transporting ATPase; beta-alpha-beta-BETA-alpha-beta, hydrolase; NMR {Bacillus subtilis} SCOP: d.58.17.1 PDB: 2voy_A 1kqk_A Length = 80

 Score = 37.7 bits (88), Expect = 4e-04
 Identities = 14/63 (22%), Positives = 29/63 (46%), Gaps = 1/63 (1%)

Query: 213 NQVVVLRVS-LHCKGCEGKVRKHLSRMKGVSSFNIDFAAKKVTVVGDVTPLSVLASISKV 271
            +     +  + C  C  ++ K L++++GV++  ++FA + VTV  +    SV      V
Sbjct: 2   TEKAEFDIEGMTCAACANRIEKRLNKIEGVANAPVNFALETVTVEYNPKEASVSDLKEAV 61

Query: 272 KNA 274
              
Sbjct: 62  DKL 64

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	298
3iwl_A	68	Copper transport protein ATOX1; beta-alpha-beta-BE	99.53
3dxs_X	74	Copper-transporting ATPase RAN1; CXXC motif, ferre	99.38
1cc8_A	73	Protein (metallochaperone ATX1); copper transport,	99.38
4a4j_A	69	Pacszia, cation-transporting ATPase PACS; hydrolas	99.38
3fry_A	73	Probable copper-exporting P-type ATPase A; transpo	99.36
2crl_A	98	Copper chaperone for superoxide dismutase; SOD1, f	99.3
2xmm_A	64	SSR2857 protein, ATX1; metal transport, copper hom	99.23
2k2p_A	85	Uncharacterized protein ATU1203; putative metal-bi	99.21
2xmw_A	71	PACS-N, cation-transporting ATPase PACS; hydrolase	99.19
2roe_A	66	Heavy metal binding protein; NMR {Thermus thermoph	99.18
2l3m_A	71	Copper-ION-binding protein; structural genomics, c	99.17
1q8l_A	84	Copper-transporting ATPase 1; metal binding protei	99.16
1aw0_A	72	Menkes copper-transporting ATPase; copper-binding	99.16
1jww_A	80	Potential copper-transporting ATPase; beta-alpha-b	99.14
1osd_A	72	MERP, hypothetical protein MERP; mercury resistanc	99.14
1mwy_A	73	ZNTA; open-faced beta-sandwich fold, beta-alpha-be	99.13
1opz_A	76	Potential copper-transporting ATPase; mutation, fo	99.13
1fvq_A	72	Copper-transporting ATPase; APO-CCC2A, hydrolase;	99.13
2qif_A	69	Copper chaperone COPZ; tetranuclear Cu(I) cluster;	99.13
1y3j_A	77	Copper-transporting ATPase 1; ferrodoxin-like fold	99.13
3cjk_B	75	Copper-transporting ATPase 1; HAH1, ATP7B, menkes	99.11
1kvi_A	79	Copper-transporting ATPase 1; menkes, Cu-protein,	99.11
1cpz_A	68	Protein (COPZ); copper chaperone, metal transport,	99.08
2g9o_A	90	Copper-transporting ATPase 1; menkes disease, solu	99.07
2kkh_A	95	Putative heavy metal transporter; zinc transport,	99.06
1yg0_A	66	COP associated protein; open-faced beta-sandwich,	99.05
2kyz_A	67	Heavy metal binding protein; structural genomics,	99.05
2kt2_A	69	Mercuric reductase; nmera, MERA, HMA domain, mercu	99.03
2ldi_A	71	Zinc-transporting ATPase; metal homeostasis, metal	99.03
1yjr_A	75	Copper-transporting ATPase 1; metallochaperone, pr	99.02
1p6t_A	151	Potential copper-transporting ATPase; COPA, P-type	99.01
2ew9_A	149	Copper-transporting ATPase 2; copper trafficking,	99.0
2aj0_A	71	Probable cadmium-transporting ATPase; ferrodoxin-l	98.99
2ofg_X	111	Zinc-transporting ATPase; ferredoxin-like fold, be	98.98
1qup_A	222	Superoxide dismutase 1 copper chaperone; two domai	98.92
2rop_A	202	Copper-transporting ATPase 2; wilson protein, mobi	98.84
2ew9_A	149	Copper-transporting ATPase 2; copper trafficking,	98.82
1jk9_B	249	CCS, copper chaperone for superoxide dismutase; pr	98.78
2rop_A	202	Copper-transporting ATPase 2; wilson protein, mobi	98.59
1p6t_A	151	Potential copper-transporting ATPase; COPA, P-type	98.45
3j09_A	723	COPA, copper-exporting P-type ATPase A; copper tra	98.3

>3iwl_A Copper transport protein ATOX1; beta-alpha-beta-BETA-alpha-beta, cisplatin, platinum, chaperone, ION transport, metal-binding, metal transport; HET: TCE; 1.60A {Homo sapiens} SCOP: d.58.17.1 PDB: 1fe4_A* 1fee_A* 1tl4_A 1tl5_A 2k1r_B 1fe0_A* 3iwx_A 3cjk_A

Probab=99.53  E-value=2.6e-14  Score=102.70  Aligned_cols=66  Identities=26%  Similarity=0.498  Sum_probs=61.7

Q ss_pred             ceEEEEEEeecchhhHHHHHHHhhccCCcceeEEecCCCEEEEEecCCHHHHHHHHHhh-cCeeECCC
Q 022356          213 NQVVVLRVSLHCKGCEGKVRKHLSRMKGVSSFNIDFAAKKVTVVGDVTPLSVLASISKV-KNAQFWPA  279 (298)
Q Consensus       213 mqtVvLkVgM~C~gCa~KIeKAL~kIeGVesV~VDl~skkVtV~G~vdp~eLlkaL~Kl-K~Aelwp~  279 (298)
                      |++++|+|||+|++|+.+|+++|.+++|| .+.||+.+++++|.+.+++++|.++|++. |.+++|..
T Consensus         1 m~~~~~~vgm~C~~C~~~i~~~l~~~~gV-~v~v~~~~~~~~v~~~~~~~~i~~~i~~~Gy~~~~~~~   67 (68)
T 3iwl_A            1 MPKHEFSVDMTCGGCAEAVSRVLNKLGGV-KYDIDLPNKKVCIESEHSMDTLLATLKKTGKTVSYLGL   67 (68)
T ss_dssp             -CEEEEEECCCSHHHHHHHHHHHHHHCSE-EEEEETTTTEEEEEESSCHHHHHHHHHTTCSCEEEEEC
T ss_pred             CceEEEEECcCcHHHHHHHHHHHHcCCCe-EEEEEcCCCEEEEEecCCHHHHHHHHHHcCCceEecCC
Confidence            56788999999999999999999999999 99999999999999999999999999998 99998854

>3dxs_X Copper-transporting ATPase RAN1; CXXC motif, ferredoxin-like fold, ATP- binding, ethylene signaling pathway, hydrolase, ION transport; 1.70A {Arabidopsis thaliana} SCOP: d.58.17.0

Probab=99.38  E-value=1.4e-12  Score=93.66  Aligned_cols=66  Identities=20%  Similarity=0.336  Sum_probs=60.9

Q ss_pred             ceEEEEEE-eecchhhHHHHHHHhhccCCcceeEEecCCCEEEEEec---CCHHHHHHHHHhh-cCeeECC
Q 022356          213 NQVVVLRV-SLHCKGCEGKVRKHLSRMKGVSSFNIDFAAKKVTVVGD---VTPLSVLASISKV-KNAQFWP  278 (298)
Q Consensus       213 mqtVvLkV-gM~C~gCa~KIeKAL~kIeGVesV~VDl~skkVtV~G~---vdp~eLlkaL~Kl-K~Aelwp  278 (298)
                      |++++|.| ||+|++|+.+|+++|.+++||..+.||+.+++++|..+   ++.++|.++|+++ |.++++.
T Consensus         1 M~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~~   71 (74)
T 3dxs_X            1 MRKIQVGVTGMTCAACSNSVEAALMNVNGVFKASVALLQNRADVVFDPNLVKEEDIKEEIEDAGFEAEILA   71 (74)
T ss_dssp             CEEEEEEEECCCSHHHHHHHHHHHHTSTTEEEEEEEGGGTEEEEEECTTTCCHHHHHHHHHHHTCEEEEEE
T ss_pred             CcEEEEEECCcCCHHHHHHHHHHHhcCCCEEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHCCCceEEcc
Confidence            67889999 99999999999999999999999999999999999853   6899999999998 9888764

>1cc8_A Protein (metallochaperone ATX1); copper transport, mercury coordination, metal transport; 1.02A {Saccharomyces cerevisiae} SCOP: d.58.17.1 PDB: 1cc7_A 1fd8_A 1fes_A 2ggp_A 3k7r_A

Probab=99.38  E-value=1.9e-12  Score=93.24  Aligned_cols=66  Identities=26%  Similarity=0.397  Sum_probs=62.3

Q ss_pred             ceEEEEEEeecchhhHHHHHHHhhccC-CcceeEEecCCCEEEEEecCCHHHHHHHHHhh-cCeeECC
Q 022356          213 NQVVVLRVSLHCKGCEGKVRKHLSRMK-GVSSFNIDFAAKKVTVVGDVTPLSVLASISKV-KNAQFWP  278 (298)
Q Consensus       213 mqtVvLkVgM~C~gCa~KIeKAL~kIe-GVesV~VDl~skkVtV~G~vdp~eLlkaL~Kl-K~Aelwp  278 (298)
                      |++++|+|.|+|++|+.+|+++|.+++ ||..+.||+.+++++|.+.++++.|.++|++. |.+++|.
T Consensus         4 m~~~~~~v~m~C~~C~~~ie~~l~~~~~GV~~~~v~~~~~~~~v~~~~~~~~i~~~i~~~Gy~~~~~~   71 (73)
T 1cc8_A            4 IKHYQFNVVMTCSGCSGAVNKVLTKLEPDVSKIDISLEKQLVDVYTTLPYDFILEKIKKTGKEVRSGK   71 (73)
T ss_dssp             CEEEEEEECCCSHHHHHHHHHHHHTTTTSEEEEEEETTTTEEEEEESSCHHHHHHHHHTTSSCEEEEE
T ss_pred             ceEEEEEEeeECHHHHHHHHHHHHhCCCCceEEEEECCCCEEEEEEeCCHHHHHHHHHHhCCCceeee
Confidence            678899999999999999999999999 99999999999999999989999999999997 9888874

>4a4j_A Pacszia, cation-transporting ATPase PACS; hydrolase, copper homeostasis, zinc homeostasis, ATX1, metal-transporting atpases; 1.25A {Synechocystis} PDB: 4a48_A 2gcf_A 2xmw_A

Probab=99.38  E-value=1.8e-12  Score=91.70  Aligned_cols=63  Identities=22%  Similarity=0.577  Sum_probs=58.7

Q ss_pred             eEEEEEE-eecchhhHHHHHHHhhccCCcceeEEecCCCEEEEE--ecCCHHHHHHHHHhh-cCeeE
Q 022356          214 QVVVLRV-SLHCKGCEGKVRKHLSRMKGVSSFNIDFAAKKVTVV--GDVTPLSVLASISKV-KNAQF  276 (298)
Q Consensus       214 qtVvLkV-gM~C~gCa~KIeKAL~kIeGVesV~VDl~skkVtV~--G~vdp~eLlkaL~Kl-K~Ael  276 (298)
                      ++++|.| ||+|.+|+.+|+++|.+++||..+.||+.+++++|.  +.+++++|.++|++. |.+++
T Consensus         2 ~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~i~~~i~~~Gy~~~~   68 (69)
T 4a4j_A            2 QTINLQLEGMDCTSCASSIERAIAKVPGVQSCQVNFALEQAVVSYHGETTPQILTDAVERAGYHARV   68 (69)
T ss_dssp             EEEEEEEESCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEECTTCCHHHHHHHHHHTTCEEEE
T ss_pred             CEEEEEECCeecHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCHHHHHHHHHHcCCceEe
Confidence            5789999 999999999999999999999999999999999999  568999999999997 88765

>3fry_A Probable copper-exporting P-type ATPase A; transport protein, metal binding domain, domain SWAP, ATP-BI cell membrane, copper transport; HET: CIT; 2.00A {Archaeoglobus fulgidus}

Probab=99.36  E-value=1.8e-12  Score=94.04  Aligned_cols=66  Identities=20%  Similarity=0.342  Sum_probs=61.9

Q ss_pred             CceEEEEEE-eecchhhHHHHHHHhhccCCcceeEEecCCCEEEEEecCCHHHHHHHHHhh-cCeeECCC
Q 022356          212 SNQVVVLRV-SLHCKGCEGKVRKHLSRMKGVSSFNIDFAAKKVTVVGDVTPLSVLASISKV-KNAQFWPA  279 (298)
Q Consensus       212 ~mqtVvLkV-gM~C~gCa~KIeKAL~kIeGVesV~VDl~skkVtV~G~vdp~eLlkaL~Kl-K~Aelwp~  279 (298)
                      .|++++|.| ||+|.+|+.+|+++|.+ +||..+.||+.+++++|.++ +++.|.++|+++ |.+++++.
T Consensus         3 ~m~~~~~~v~gm~C~~C~~~ie~~l~~-~gv~~~~v~~~~~~~~v~~~-~~~~i~~~i~~~Gy~~~~~~~   70 (73)
T 3fry_A            3 SVEKIVLELSGLSCHHCVARVKKALEE-AGAKVEKVDLNEAVVAGNKE-DVDKYIKAVEAAGYQAKLRSS   70 (73)
T ss_dssp             CCEEEEEEEESSBCGGGHHHHHHHHHH-TTCEEEEECSSEEEEEEEGG-GHHHHHHHHHHTTCEEEECCS
T ss_pred             ccEEEEEEECCCCCHHHHHHHHHHhcc-CCcEEEEEEccCCEEEEEEC-CHHHHHHHHHHcCCceEecCc
Confidence            578899999 99999999999999999 99999999999999999998 999999999998 99888763

>2crl_A Copper chaperone for superoxide dismutase; SOD1, familial ALS, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.30  E-value=1e-11  Score=96.54  Aligned_cols=70  Identities=20%  Similarity=0.326  Sum_probs=64.2

Q ss_pred             CceEEEEEEeecchhhHHHHHHHhhccCCcceeEEecCCCEEEEEecCCHHHHHHHHHhh-cCeeECCCCc
Q 022356          212 SNQVVVLRVSLHCKGCEGKVRKHLSRMKGVSSFNIDFAAKKVTVVGDVTPLSVLASISKV-KNAQFWPAAA  281 (298)
Q Consensus       212 ~mqtVvLkVgM~C~gCa~KIeKAL~kIeGVesV~VDl~skkVtV~G~vdp~eLlkaL~Kl-K~Aelwp~~~  281 (298)
                      .+.+++|+|.|+|.+|+.+|+++|.+++||..|.||+..++++|.+.++++.|.++|+++ |.+++|....
T Consensus        17 ~~~~~~l~V~m~C~~C~~~Ie~aL~~l~GV~~v~vdl~~~~~~V~~~~~~~~i~~~i~~~Gy~~~~~~~~~   87 (98)
T 2crl_A           17 TLCTLEFAVQMTCQSCVDAVRKSLQGVAGVQDVEVHLEDQMVLVHTTLPSQEVQALLEGTGRQAVLKGMGS   87 (98)
T ss_dssp             CCEEEEEEECCCSHHHHHHHHHTTTTCTTCCEEEEETTTTEEEEEESSCHHHHHHHHHTTTSCEEEEESCC
T ss_pred             cceEEEEEEeeECHHHHHHHHHHHHcCCCceEEEEECCCCEEEEEEeCCHHHHHHHHHHhCCceEEccCCC
Confidence            357788999999999999999999999999999999999999999989999999999998 9999886443

>2xmm_A SSR2857 protein, ATX1; metal transport, copper homeostasis, chaperone, P-type atpas; 1.65A {Synechocystis SP} PDB: 2xmv_A 1sb6_A 2xmj_A 2xmk_A 2xmt_A 2xmu_A

Probab=99.23  E-value=1.8e-11  Score=83.15  Aligned_cols=60  Identities=20%  Similarity=0.416  Sum_probs=55.5

Q ss_pred             EEEEEE-eecchhhHHHHHHHhhccCCcceeEEecCCCEEEEEecCCHHHHHHHHHhh-cCe
Q 022356          215 VVVLRV-SLHCKGCEGKVRKHLSRMKGVSSFNIDFAAKKVTVVGDVTPLSVLASISKV-KNA  274 (298)
Q Consensus       215 tVvLkV-gM~C~gCa~KIeKAL~kIeGVesV~VDl~skkVtV~G~vdp~eLlkaL~Kl-K~A  274 (298)
                      +++|.| ||+|.+|+.+|+++|.+++||..+.+|+..++++|.+.++.+.|.++|+++ |.+
T Consensus         2 ~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~i~~~i~~~G~~~   63 (64)
T 2xmm_A            2 TIQLTVPTIACEACAEAVTKAVQNEDAQATVQVDLTSKKVTITSALGEEQLRTAIASAGYEV   63 (64)
T ss_dssp             CEEEECTTCCSHHHHHHHHHHHHHHCTTCEEEECTTTCEEEEECSSCHHHHHHHHHHTTCCC
T ss_pred             eEEEEECCcCcHHHHHHHHHHHhcCCCcEEEEEEecCCEEEEEecCCHHHHHHHHHHcCCCC
Confidence            457999 999999999999999999999999999999999999888999999999986 754

>2k2p_A Uncharacterized protein ATU1203; putative metal-binding domain ATU1203, ontario centre for ST proteomics, structural genomics; NMR {Agrobacterium tumefaciens str}

Probab=99.21  E-value=2.7e-11  Score=91.71  Aligned_cols=69  Identities=16%  Similarity=0.246  Sum_probs=57.7

Q ss_pred             CCCCCCCceEEEEEE-eecchhhHHHHHHHhhccCCcceeEEecCCCEEEEEecCCHHHHHHHHHhh-cCe
Q 022356          206 RSEKPPSNQVVVLRV-SLHCKGCEGKVRKHLSRMKGVSSFNIDFAAKKVTVVGDVTPLSVLASISKV-KNA  274 (298)
Q Consensus       206 ~~k~~~~mqtVvLkV-gM~C~gCa~KIeKAL~kIeGVesV~VDl~skkVtV~G~vdp~eLlkaL~Kl-K~A  274 (298)
                      .+.....+.+++|.| ||+|.+|+.+|+++|.+++||..+.||+..++++|.+.++++.|.++|+++ |.+
T Consensus        14 ~~~~~~~~~~~~l~V~Gm~C~~C~~~Ie~aL~~~~GV~~v~v~l~~~~~~V~~~~~~~~i~~~i~~~Gy~~   84 (85)
T 2k2p_A           14 RENLYFQGAGLSFHVEDMTCGHCAGVIKGAIEKTVPGAAVHADPASRTVVVGGVSDAAHIAEIITAAGYTP   84 (85)
T ss_dssp             --------CEEEEECTTCCHHHHHHHHHHHHHHHSTTCEEEEETTTTEEEEESCCCHHHHHHHHHHTTCCC
T ss_pred             cccccccccEEEEEECCCCCHHHHHHHHHHHhcCCCeeEEEEECCCCEEEEEecCCHHHHHHHHHHcCCCC
Confidence            344556678889999 999999999999999999999999999999999999889999999999987 754

>2xmw_A PACS-N, cation-transporting ATPase PACS; hydrolase, Cu(I)-binding, trafficking; 1.80A {Synechocystis SP} PDB: 2gcf_A

Probab=99.19  E-value=9.2e-11  Score=81.10  Aligned_cols=64  Identities=20%  Similarity=0.499  Sum_probs=56.3

Q ss_pred             ceEEEEEE-eecchhhHHHHHHHhhccCCcceeEEecCCCEEEEEec--CCHHHHHHHHHhh-cCeeE
Q 022356          213 NQVVVLRV-SLHCKGCEGKVRKHLSRMKGVSSFNIDFAAKKVTVVGD--VTPLSVLASISKV-KNAQF  276 (298)
Q Consensus       213 mqtVvLkV-gM~C~gCa~KIeKAL~kIeGVesV~VDl~skkVtV~G~--vdp~eLlkaL~Kl-K~Ael  276 (298)
                      ++++.|.| ||+|.+|+.+|+++|.+++||..+.+|+..++++|..+  ++.+.|.++|++. |.+.+
T Consensus         2 ~~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~i~~~i~~~G~~~~~   69 (71)
T 2xmw_A            2 AQTINLQLEGMRCAACASSIERAIAKVPGVQSCQVNFALEQAVVSYHGETTPQILTDAVERAGYHARV   69 (71)
T ss_dssp             CEEEEEEEECCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEEC---CHHHHHHHHHHHTCEEEE
T ss_pred             CcEEEEEECCcccHHHHHHHHHHHhcCCCeEEEEEEccCCEEEEEECCCCCHHHHHHHHHHcCCCcee
Confidence            46788999 99999999999999999999999999999999999854  6788899999887 76654

>2roe_A Heavy metal binding protein; NMR {Thermus thermophilus} PDB: 2rog_A

Probab=99.18  E-value=3.4e-11  Score=83.89  Aligned_cols=60  Identities=22%  Similarity=0.454  Sum_probs=55.2

Q ss_pred             EEEE-eecchhhHHHHHHHhhccCCcceeEEecCCCEEEEEecCCHHHHHHHHHhh-cCeeE
Q 022356          217 VLRV-SLHCKGCEGKVRKHLSRMKGVSSFNIDFAAKKVTVVGDVTPLSVLASISKV-KNAQF  276 (298)
Q Consensus       217 vLkV-gM~C~gCa~KIeKAL~kIeGVesV~VDl~skkVtV~G~vdp~eLlkaL~Kl-K~Ael  276 (298)
                      .|.| ||+|++|+.+|+++|.+++||..+.+|+..++++|.+.++.+.|.++|+++ |.+..
T Consensus         3 ~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~i~~~i~~~Gy~~~~   64 (66)
T 2roe_A            3 KLKVEGMTCNHCVMAVTKALKKVPGVEKVEVSLEKGEALVEGTADPKALVQAVEEEGYKAEV   64 (66)
T ss_dssp             CEEEECCCSHHHHHHHHHHHHTSTTCCCEEECSSSCBEEECSCCCHHHHHHHHHTTTCEEEE
T ss_pred             EEEECCeEcHHHHHHHHHHHHcCCCeEEEEEEeCCCEEEECCCCCHHHHHHHHHHcCCCcEe
Confidence            5889 999999999999999999999999999999999997778999999999987 77654

>2l3m_A Copper-ION-binding protein; structural genomics, center for structural genomics of infec diseases, csgid, metal binding protein; NMR {Bacillus anthracis}

Probab=99.17  E-value=1.1e-10  Score=81.25  Aligned_cols=63  Identities=21%  Similarity=0.374  Sum_probs=56.6

Q ss_pred             CceEEEEEE-eecchhhHHHHHHHhhccCCcceeEEecCCCEEEEEe---cCCHHHHHHHHHhh-cCe
Q 022356          212 SNQVVVLRV-SLHCKGCEGKVRKHLSRMKGVSSFNIDFAAKKVTVVG---DVTPLSVLASISKV-KNA  274 (298)
Q Consensus       212 ~mqtVvLkV-gM~C~gCa~KIeKAL~kIeGVesV~VDl~skkVtV~G---~vdp~eLlkaL~Kl-K~A  274 (298)
                      .|.+++|.| ||+|.+|+.+|+++|.+++||..+.+|+..++++|..   .++.+.|.++|+++ |.+
T Consensus         3 ~~~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~   70 (71)
T 2l3m_A            3 AMEQLTLQVEGMSCGHCVNAIESSVKELNGVEQVKVQLAEGTVEVTIDSSVVTLKDIVAVIEDQGYDV   70 (71)
T ss_dssp             SEEEEEEEEECCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEEETTTSCHHHHHHHHHHTTCEE
T ss_pred             CcEEEEEEECCccCHHHHHHHHHHHHcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHcCCCC
Confidence            467889999 9999999999999999999999999999999999984   36788999999886 654

>1q8l_A Copper-transporting ATPase 1; metal binding protein; NMR {Homo sapiens} SCOP: d.58.17.1 PDB: 1s6o_A 1s6u_A

Probab=99.16  E-value=9.6e-11  Score=86.07  Aligned_cols=71  Identities=14%  Similarity=0.350  Sum_probs=63.3

Q ss_pred             CCCCceEEEEEE-eecchhhHHHHHHHhhccCCcceeEEecCCCEEEEEec---CCHHHHHHHHHhh-cCeeECCC
Q 022356          209 KPPSNQVVVLRV-SLHCKGCEGKVRKHLSRMKGVSSFNIDFAAKKVTVVGD---VTPLSVLASISKV-KNAQFWPA  279 (298)
Q Consensus       209 ~~~~mqtVvLkV-gM~C~gCa~KIeKAL~kIeGVesV~VDl~skkVtV~G~---vdp~eLlkaL~Kl-K~Aelwp~  279 (298)
                      +.+...++.|.| ||+|.+|+.+|+++|.+++||..+.||+..++++|..+   ++.+.|.++|+.+ |.+.++..
T Consensus         4 ~~~~~~~~~~~v~gm~C~~C~~~ie~~l~~~~GV~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~~~   79 (84)
T 1q8l_A            4 AQAGEVVLKMKVEGMTCHSCTSTIEGKIGKLQGVQRIKVSLDNQEATIVYQPHLISVEEMKKQIEAMGFPAFVKKQ   79 (84)
T ss_dssp             SSSSCEEEEEEECCTTTCSSCHHHHHHHHTCTTEEEEEECSTTTEEEEEECTTTCCHHHHHHHHHHTTCCEECSCC
T ss_pred             cccCceEEEEEECCcccHHHHHHHHHHHHcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHcCCceEecCC
Confidence            456677889999 99999999999999999999999999999999999863   5789999999987 88877654

>1aw0_A Menkes copper-transporting ATPase; copper-binding domain, hydrolase; NMR {Homo sapiens} SCOP: d.58.17.1 PDB: 2aw0_A

Probab=99.16  E-value=1.6e-10  Score=80.34  Aligned_cols=63  Identities=24%  Similarity=0.440  Sum_probs=56.5

Q ss_pred             eEEEEEE-eecchhhHHHHHHHhhccCCcceeEEecCCCEEEEEec---CCHHHHHHHHHhh-cCeeE
Q 022356          214 QVVVLRV-SLHCKGCEGKVRKHLSRMKGVSSFNIDFAAKKVTVVGD---VTPLSVLASISKV-KNAQF  276 (298)
Q Consensus       214 qtVvLkV-gM~C~gCa~KIeKAL~kIeGVesV~VDl~skkVtV~G~---vdp~eLlkaL~Kl-K~Ael  276 (298)
                      ++++|.| ||+|.+|+.+|+++|.+++||..+.+|+..++++|..+   ++.+.|.++|++. |.+.+
T Consensus         3 ~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~~   70 (72)
T 1aw0_A            3 QETVINIDGMTCNSCVQSIEGVISKKPGVKSIRVSLANSNGTVEYDPLLTSPETLRGAIEDMGFDATL   70 (72)
T ss_dssp             EEEEEEEECCCHHHHHHHHHHHHHTSTTCCCEEEETTTTEEEEEECTTTCCHHHHHHHHHHHTCEEEE
T ss_pred             eEEEEEECCeecHHHHHHHHHHHhcCCCeEEEEEEccCCEEEEEECCCcCCHHHHHHHHHHCCCCcEe
Confidence            4578999 99999999999999999999999999999999999864   6788999999987 76654

>1jww_A Potential copper-transporting ATPase; beta-alpha-beta-BETA-alpha-beta, hydrolase; NMR {Bacillus subtilis} SCOP: d.58.17.1 PDB: 2voy_A 1kqk_A

Probab=99.14  E-value=2e-10  Score=81.57  Aligned_cols=68  Identities=18%  Similarity=0.414  Sum_probs=60.7

Q ss_pred             ceEEEEEE-eecchhhHHHHHHHhhccCCcceeEEecCCCEEEEEe---cCCHHHHHHHHHhh-cCeeECCCC
Q 022356          213 NQVVVLRV-SLHCKGCEGKVRKHLSRMKGVSSFNIDFAAKKVTVVG---DVTPLSVLASISKV-KNAQFWPAA  280 (298)
Q Consensus       213 mqtVvLkV-gM~C~gCa~KIeKAL~kIeGVesV~VDl~skkVtV~G---~vdp~eLlkaL~Kl-K~Aelwp~~  280 (298)
                      |.++.|.| ||+|.+|+.+|+++|.+++||..+.+|+..++++|..   .++.+.|.++|.++ |.+.+++..
T Consensus         2 m~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~~~~~~   74 (80)
T 1jww_A            2 TEKAEFDIEGMTCAACANRIEKRLNKIEGVANAPVNFALETVTVEYNPKEASVSDLKEAVDKLGYKLKLKGEQ   74 (80)
T ss_dssp             CEEEEEEEESCCCHHHHHHHHHHHHTSTTEEECCCCSSSSEEEEEECTTTCCHHHHHHHHHHHTSEEEECCSS
T ss_pred             ceEEEEEECCccCHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHcCCeEEecCcc
Confidence            56788999 9999999999999999999999999999999999975   36788999999987 888887654

>1osd_A MERP, hypothetical protein MERP; mercury resistance, metal binding protein, perisplasm, structural genomics; 2.00A {Cupriavidus metallidurans} SCOP: d.58.17.1 PDB: 1afi_A 1afj_A 2hqi_A

Probab=99.14  E-value=1.9e-10  Score=79.99  Aligned_cols=64  Identities=23%  Similarity=0.448  Sum_probs=57.2

Q ss_pred             ceEEEEEE-eecchhhHHHHHHHhhccCCcceeEEecCCCEEEEEec---CCHHHHHHHHHhh-cCeeE
Q 022356          213 NQVVVLRV-SLHCKGCEGKVRKHLSRMKGVSSFNIDFAAKKVTVVGD---VTPLSVLASISKV-KNAQF  276 (298)
Q Consensus       213 mqtVvLkV-gM~C~gCa~KIeKAL~kIeGVesV~VDl~skkVtV~G~---vdp~eLlkaL~Kl-K~Ael  276 (298)
                      ++++.|.| ||+|.+|+.+|+++|.+++||..+.+|+..++++|..+   ++.+.|.++|++. |.+.+
T Consensus         2 ~~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~~   70 (72)
T 1osd_A            2 TQTVTLSVPGMTCSACPITVKKAISKVEGVSKVDVTFETRQAVVTFDDAKTSVQKLTKATADAGYPSSV   70 (72)
T ss_dssp             EEEEEEECTTCCSTTHHHHHHHHHHTSTTEEEEEEETTTTEEEEEEETTTCCHHHHHHHHHHTTCCCEE
T ss_pred             ceEEEEEECCeEcHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHHhcCCCeEe
Confidence            45678999 99999999999999999999999999999999999853   6788999999987 77654

>1mwy_A ZNTA; open-faced beta-sandwich fold, beta-alpha-beta-BETA-alpha- beta, hydrolase; NMR {Escherichia coli} SCOP: d.58.17.1 PDB: 1mwz_A

Probab=99.13  E-value=2.5e-10  Score=80.69  Aligned_cols=64  Identities=23%  Similarity=0.410  Sum_probs=56.3

Q ss_pred             CceEEEEEE-eecchhhHHHHHHHhhccCCcceeEEecCCCEEEEEecC-CHHHHHHHHHhh-cCee
Q 022356          212 SNQVVVLRV-SLHCKGCEGKVRKHLSRMKGVSSFNIDFAAKKVTVVGDV-TPLSVLASISKV-KNAQ  275 (298)
Q Consensus       212 ~mqtVvLkV-gM~C~gCa~KIeKAL~kIeGVesV~VDl~skkVtV~G~v-dp~eLlkaL~Kl-K~Ae  275 (298)
                      .|+++.|.| ||+|.+|+.+|+++|.+++||..+.||+..++++|..+. ..+.|.++|+.+ |.+.
T Consensus         1 ~m~~~~~~v~gm~C~~C~~~ie~~l~~~~gV~~~~v~~~~~~~~v~~~~~~~~~i~~~i~~~Gy~~~   67 (73)
T 1mwy_A            1 SGTRYSWKVSGMDCAACARKVENAVRQLAGVNQVQVLFATEKLVVDADNDIRAQVESALQKAGYSLR   67 (73)
T ss_dssp             CCEEEEEEEESCCSTTHHHHHHHHHHTSSSEEEEEEETTTTEEEEEESSCCHHHHHHHHHHHTCEEE
T ss_pred             CCeEEEEEECCcCCHHHHHHHHHHHhcCCCeeEEEEEecCCEEEEEECCCCHHHHHHHHHHcCCccc
Confidence            367889999 999999999999999999999999999999999998653 367788889887 7654

>1opz_A Potential copper-transporting ATPase; mutation, folding, abbab fold, hydrolase; NMR {Bacillus subtilis} SCOP: d.58.17.1 PDB: 1oq3_A 1oq6_A

Probab=99.13  E-value=2e-10  Score=80.12  Aligned_cols=67  Identities=22%  Similarity=0.484  Sum_probs=59.2

Q ss_pred             CCceEEEEEE-eecchhhHHHHHHHhhccCCcceeEEecCCCEEEEEe---cCCHHHHHHHHHhh-cCeeEC
Q 022356          211 PSNQVVVLRV-SLHCKGCEGKVRKHLSRMKGVSSFNIDFAAKKVTVVG---DVTPLSVLASISKV-KNAQFW  277 (298)
Q Consensus       211 ~~mqtVvLkV-gM~C~gCa~KIeKAL~kIeGVesV~VDl~skkVtV~G---~vdp~eLlkaL~Kl-K~Aelw  277 (298)
                      ..+.++.|.| ||+|.+|+.+|+++|..++||..+.+|+..++++|..   .++.+.|.++|++. |.+.+|
T Consensus         3 ~~~~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~~~   74 (76)
T 1opz_A            3 SEQKEIAMQVSGMTCAACAARIEKGLKRMPGVTDANVNLATETVNVIYDPAETGTAAIQEKIEKLGYHVVIE   74 (76)
T ss_dssp             CCCEEEEEEEESCCSTTHHHHHHHHHHTSTTEEEEEEEGGGTEEEEEECTTTCCHHHHHHHHHHHTCEEECC
T ss_pred             ccceEEEEEECCcccHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHCCCceecC
Confidence            3467889999 9999999999999999999999999999999999985   36788999999887 876654

>1fvq_A Copper-transporting ATPase; APO-CCC2A, hydrolase; NMR {Saccharomyces cerevisiae} SCOP: d.58.17.1 PDB: 1fvs_A 2ggp_B

Probab=99.13  E-value=1.6e-10  Score=80.31  Aligned_cols=64  Identities=25%  Similarity=0.456  Sum_probs=58.0

Q ss_pred             EEEEEE-eecchhhHHHHHHHhhccCCcceeEEecCCCEEEEEec--CCHHHHHHHHHhh-cCeeECC
Q 022356          215 VVVLRV-SLHCKGCEGKVRKHLSRMKGVSSFNIDFAAKKVTVVGD--VTPLSVLASISKV-KNAQFWP  278 (298)
Q Consensus       215 tVvLkV-gM~C~gCa~KIeKAL~kIeGVesV~VDl~skkVtV~G~--vdp~eLlkaL~Kl-K~Aelwp  278 (298)
                      ++.|.| ||+|.+|+.+|+++|.+++||..+.+|+..++++|..+  ++.+.|.++|++. |.+++|.
T Consensus         3 ~~~~~v~gm~C~~c~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~i~~~i~~~G~~~~~~~   70 (72)
T 1fvq_A            3 EVILAVHGMTCSACTNTINTQLRALKGVTKCDISLVTNECQVTYDNEVTADSIKEIIEDCGFDCEILR   70 (72)
T ss_dssp             EEEEEECSCCSHHHHHHHHHHHHTSSSEEEECCBTTTTEEEEEECTTSCHHHHHHHHHHHTCCEEEEE
T ss_pred             EEEEEECCeecHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCHHHHHHHHHHCCCceEEcc
Confidence            568999 99999999999999999999999999999999999854  6788999999987 8888774

>2qif_A Copper chaperone COPZ; tetranuclear Cu(I) cluster; 1.50A {Bacillus subtilis} SCOP: d.58.17.1 PDB: 3i9z_A 1k0v_A 1p8g_A

Probab=99.13  E-value=2.6e-10  Score=77.15  Aligned_cols=62  Identities=24%  Similarity=0.414  Sum_probs=55.0

Q ss_pred             ceEEEEEE-eecchhhHHHHHHHhhccCCcceeEEecCCCEEEEEec---CCHHHHHHHHHhh-cCe
Q 022356          213 NQVVVLRV-SLHCKGCEGKVRKHLSRMKGVSSFNIDFAAKKVTVVGD---VTPLSVLASISKV-KNA  274 (298)
Q Consensus       213 mqtVvLkV-gM~C~gCa~KIeKAL~kIeGVesV~VDl~skkVtV~G~---vdp~eLlkaL~Kl-K~A  274 (298)
                      |.++.|.| ||+|.+|+.+|+++|..++||..+.+|+..++++|..+   ++.+.|.++|+.. |.+
T Consensus         1 m~~~~~~v~gm~C~~c~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~   67 (69)
T 2qif_A            1 MEQKTLQVEGMSCQHCVKAVETSVGELDGVSAVHVNLEAGKVDVSFDADKVSVKDIADAIEDQGYDV   67 (69)
T ss_dssp             CEEEEEEEECCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEECTTTCCHHHHHHHHHHTTCEE
T ss_pred             CeEEEEEECCcccHHHHHHHHHHHhcCCCeeEEEEEecCCEEEEEECCCCCCHHHHHHHHHHcCCCc
Confidence            45678999 99999999999999999999999999999999999853   6788899999886 643

>1y3j_A Copper-transporting ATPase 1; ferrodoxin-like fold, beta-alpha-beta-BETA-alpha-beta structure, structural proteomics in europe, spine; NMR {Homo sapiens} PDB: 1y3k_A

Probab=99.13  E-value=1.4e-10  Score=82.85  Aligned_cols=66  Identities=20%  Similarity=0.369  Sum_probs=59.6

Q ss_pred             ceEEEEEE-eecchhhHHHHHHHhhccCCcceeEEecCCCEEEEEec---CCHHHHHHHHHhh-cCeeECC
Q 022356          213 NQVVVLRV-SLHCKGCEGKVRKHLSRMKGVSSFNIDFAAKKVTVVGD---VTPLSVLASISKV-KNAQFWP  278 (298)
Q Consensus       213 mqtVvLkV-gM~C~gCa~KIeKAL~kIeGVesV~VDl~skkVtV~G~---vdp~eLlkaL~Kl-K~Aelwp  278 (298)
                      |+++.|.| ||+|.+|+.+|+++|.+++||..+.+|+..++++|..+   ++.+.|.++|+.+ |.+.++.
T Consensus         2 m~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~~   72 (77)
T 1y3j_A            2 SSKCYIQVTGMTCASCVANIERNLRREEGIYSILVALMAGKAEVRYNPAVIQPPMIAEFIRELGFGATVIE   72 (77)
T ss_dssp             CEEEEEEESCGGGCSHHHHHHHHHTTSSSEEECCCBTTTTBEEEEECTTTSCHHHHHHHHHHHTSCEEEES
T ss_pred             CEEEEEEECCeeCHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHcCCceEECC
Confidence            77889999 99999999999999999999999999999999999853   5788999999987 8877653

>3cjk_B Copper-transporting ATPase 1; HAH1, ATP7B, menkes disease, metal homeostasis, chaperone, ION transport, metal- binding, alternative splicing; 1.80A {Homo sapiens} PDB: 2k1r_A

Probab=99.11  E-value=2.8e-10  Score=80.38  Aligned_cols=65  Identities=20%  Similarity=0.465  Sum_probs=57.9

Q ss_pred             eEEEEEE-eecchhhHHHHHHHhhccCCcceeEEecCCCEEEEEec---CCHHHHHHHHHhh-cCeeECC
Q 022356          214 QVVVLRV-SLHCKGCEGKVRKHLSRMKGVSSFNIDFAAKKVTVVGD---VTPLSVLASISKV-KNAQFWP  278 (298)
Q Consensus       214 qtVvLkV-gM~C~gCa~KIeKAL~kIeGVesV~VDl~skkVtV~G~---vdp~eLlkaL~Kl-K~Aelwp  278 (298)
                      .++.|.| ||+|.+|+.+|+++|.+++||..+.+|+..++++|..+   ++.+.|.++|+++ |.+.++.
T Consensus         2 ~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~~   71 (75)
T 3cjk_B            2 NSVTISVEGMTCNSCVWTIEQQIGKVNGVHHIKVSLEEKNATIIYDPKLQTPKTLQEAIDDMGFDAVIHN   71 (75)
T ss_dssp             EEEEEEECCCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEECTTTCCHHHHHHHHHHTTCCEEEEE
T ss_pred             cEEEEEECCccCHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHcCCceEeec
Confidence            3568999 99999999999999999999999999999999999853   5789999999987 8877654

>1kvi_A Copper-transporting ATPase 1; menkes, Cu-protein, hydrolase; NMR {Homo sapiens} SCOP: d.58.17.1 PDB: 1kvj_A

Probab=99.11  E-value=3.8e-10  Score=80.67  Aligned_cols=66  Identities=20%  Similarity=0.446  Sum_probs=59.0

Q ss_pred             ceEEEEEE-eecchhhHHHHHHHhhccCCcceeEEecCCCEEEEEec---CCHHHHHHHHHhh-cCeeECC
Q 022356          213 NQVVVLRV-SLHCKGCEGKVRKHLSRMKGVSSFNIDFAAKKVTVVGD---VTPLSVLASISKV-KNAQFWP  278 (298)
Q Consensus       213 mqtVvLkV-gM~C~gCa~KIeKAL~kIeGVesV~VDl~skkVtV~G~---vdp~eLlkaL~Kl-K~Aelwp  278 (298)
                      +.++.|.| ||+|.+|+.+|+++|.+++||..+.||+..++++|..+   ++.+.|.++|+++ |.+.+..
T Consensus         7 ~~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~~   77 (79)
T 1kvi_A            7 VNSVTISVEGMTCNSCVWTIEQQIGKVNGVHHIKVSLEEKNATIIYDPKLQTPKTLQEAIDDMGFDAVIHN   77 (79)
T ss_dssp             CEEEEEEECCCCSTTTHHHHHHHHHHSSSCCCEEEEGGGTEEEEEECTTTCCHHHHHHHHHHHCCCEEECC
T ss_pred             cEEEEEEECCccCHHHHHHHHHHHhcCCCeEEEEEEccCCEEEEEECCCCCCHHHHHHHHHHCCCceEecC
Confidence            56788999 99999999999999999999999999999999999853   5788999999987 8776643

>1cpz_A Protein (COPZ); copper chaperone, metal transport, gene regulation; NMR {Enterococcus hirae} SCOP: d.58.17.1

Probab=99.08  E-value=4.1e-10  Score=77.15  Aligned_cols=61  Identities=20%  Similarity=0.437  Sum_probs=54.9

Q ss_pred             EEEEE-eecchhhHHHHHHHhhccCCcceeEEecCCCEEEEEec---CCHHHHHHHHHhh-cCeeE
Q 022356          216 VVLRV-SLHCKGCEGKVRKHLSRMKGVSSFNIDFAAKKVTVVGD---VTPLSVLASISKV-KNAQF  276 (298)
Q Consensus       216 VvLkV-gM~C~gCa~KIeKAL~kIeGVesV~VDl~skkVtV~G~---vdp~eLlkaL~Kl-K~Ael  276 (298)
                      +.|.| ||+|.+|+.+|+++|.+++||..+.+|+..++++|..+   ++.+.|.++|++. |.+++
T Consensus         2 ~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~~   67 (68)
T 1cpz_A            2 QEFSVKGMSCNHCVARIEEAVGRISGVKKVKVQLKKEKAVVKFDEANVQATEICQAINELGYQAEV   67 (68)
T ss_dssp             CEEEESCCCSSSHHHHHHHHHHTSTTEEEEEEETTTTEEEEEECTTTCCHHHHHHHHHTTSSCEEE
T ss_pred             EEEEECCeeCHHHHHHHHHHHHcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHcCCCccc
Confidence            36899 99999999999999999999999999999999999864   6788999999987 77664

>2g9o_A Copper-transporting ATPase 1; menkes disease, solution structure, structural genomics, structural proteomics in europe, spine, hydrolase; NMR {Homo sapiens} PDB: 2ga7_A

Probab=99.07  E-value=4.1e-10  Score=84.91  Aligned_cols=67  Identities=25%  Similarity=0.408  Sum_probs=58.6

Q ss_pred             eEEEEEE-eecchhhHHHHHHHhhccCCcceeEEecCCCEEEEEe---cCCHHHHHHHHHhh----cCeeECCCC
Q 022356          214 QVVVLRV-SLHCKGCEGKVRKHLSRMKGVSSFNIDFAAKKVTVVG---DVTPLSVLASISKV----KNAQFWPAA  280 (298)
Q Consensus       214 qtVvLkV-gM~C~gCa~KIeKAL~kIeGVesV~VDl~skkVtV~G---~vdp~eLlkaL~Kl----K~Aelwp~~  280 (298)
                      .++.|.| ||+|.+|+.+|+++|.+++||..+.||+..++++|..   .++.+.|.++|+++    |.+.+|.+.
T Consensus         3 ~~~~l~v~Gm~C~~C~~~Ie~~L~~~~GV~~v~v~l~~~~~~V~~~~~~~~~~~i~~~i~~~g~Ggy~~~~~~~~   77 (90)
T 2g9o_A            3 STATFIIDGMHCKSCVSNIESTLSALQYVSSIVVSLENRSAIVVYNASSVTPESLRKAIEAVSPGLYRVSITSEV   77 (90)
T ss_dssp             EEEEEEEESCCHHHHHHHHHHHHTTCTTEEEEEEETTTTEEEEEECCSSCCTHHHHHHHHTTSTTTCEEECCCCC
T ss_pred             cEEEEEECCcCCHHHHHHHHHHHHcCCCeeEEEEEccCCEEEEEECCCCCCHHHHHHHHHhccCCCeEEEEeCCC
Confidence            5678999 9999999999999999999999999999999999985   36788999999875    677776543

>2kkh_A Putative heavy metal transporter; zinc transport, metal binding, metal selectivity, ferredoxin fold, ATP-binding, hydrolase; NMR {Arabidopsis thaliana}

Probab=99.06  E-value=1.2e-09  Score=82.37  Aligned_cols=72  Identities=18%  Similarity=0.326  Sum_probs=63.2

Q ss_pred             CCCCceEEEEEE-eecchhhHHHHHHHhhccCCcceeEEecCCCEEEEEec---CCHHHHHHHHHhh-cCeeECCCC
Q 022356          209 KPPSNQVVVLRV-SLHCKGCEGKVRKHLSRMKGVSSFNIDFAAKKVTVVGD---VTPLSVLASISKV-KNAQFWPAA  280 (298)
Q Consensus       209 ~~~~mqtVvLkV-gM~C~gCa~KIeKAL~kIeGVesV~VDl~skkVtV~G~---vdp~eLlkaL~Kl-K~Aelwp~~  280 (298)
                      ....|.++.|.| ||+|.+|+..|+++|..++||..+.||+..+.++|..+   ++.+.|.++|..+ |.+.+++..
T Consensus        11 ~~~~~~~~~~~v~gm~C~~C~~~ie~~l~~~~GV~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~~~~   87 (95)
T 2kkh_A           11 KVKKLQKSYFDVLGICCTSEVPIIENILKSLDGVKEYSVIVPSRTVIVVHDSLLISPFQIAKALNEARLEANVRVNG   87 (95)
T ss_dssp             CSSCSEEEEEEETTCCTTTTHHHHHHHHHHSSSEEEEEEETTTTEEEEEECTTTCCHHHHHHHHHHHTCCEEESCCC
T ss_pred             cccceEEEEEEECCcCCHHHHHHHHHHHhcCCCeeEEEEEccCCEEEEEECCCCCCHHHHHHHHHHcCCceEEecCC
Confidence            445678889999 99999999999999999999999999999999999864   5788999999987 888776543

>1yg0_A COP associated protein; open-faced beta-sandwich, missing C-terminal beta-sheet, Met transport; NMR {Helicobacter pylori}

Probab=99.05  E-value=4.3e-10  Score=76.62  Aligned_cols=59  Identities=24%  Similarity=0.410  Sum_probs=53.0

Q ss_pred             EEEEEE-eecchhhHHHHHHHhhccCCcceeEEecCCCEEEEEec--CCHHHHHHHHHhh-cC
Q 022356          215 VVVLRV-SLHCKGCEGKVRKHLSRMKGVSSFNIDFAAKKVTVVGD--VTPLSVLASISKV-KN  273 (298)
Q Consensus       215 tVvLkV-gM~C~gCa~KIeKAL~kIeGVesV~VDl~skkVtV~G~--vdp~eLlkaL~Kl-K~  273 (298)
                      +++|.| ||+|.+|+.+|+++|.+++||..+.+|+..++++|..+  .+.+.|.++|+++ |.
T Consensus         2 ~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~i~~~i~~~G~~   64 (66)
T 1yg0_A            2 KATFQVPSITCNHCVDKIEKFVGEIEGVSFIDVSVEKKSVVVEFDAPATQDLIKEALLDAGQE   64 (66)
T ss_dssp             EEEECCTTCSCSHHHHHHHHHHTTSSSEEEEEEETTTTEEEEEECTTCCHHHHHHHHHHHTCC
T ss_pred             eEEEEECCcccHHHHHHHHHHHhcCCCceEEEEEcCCCEEEEEECCCCCHHHHHHHHHHcCCC
Confidence            457899 99999999999999999999999999999999999864  5788899999886 64

>2kyz_A Heavy metal binding protein; structural genomics, PSI-biology, protein structure initiative, joint for structural genomics, JCSG; NMR {Thermotoga maritima}

Probab=99.05  E-value=3.2e-10  Score=79.31  Aligned_cols=59  Identities=27%  Similarity=0.487  Sum_probs=52.7

Q ss_pred             EEEEEE-eecchhhHHHHHHHhhccCCcceeEEecCCCEEEEEecCCHHHHHHHHHhh-cCee
Q 022356          215 VVVLRV-SLHCKGCEGKVRKHLSRMKGVSSFNIDFAAKKVTVVGDVTPLSVLASISKV-KNAQ  275 (298)
Q Consensus       215 tVvLkV-gM~C~gCa~KIeKAL~kIeGVesV~VDl~skkVtV~G~vdp~eLlkaL~Kl-K~Ae  275 (298)
                      +++|.| ||+|++|+.+|+++|.++ ||..+.+|+..++++|.++.+ +.|.++|+++ |.+.
T Consensus         2 ~~~~~v~gm~C~~C~~~i~~~l~~~-gv~~~~v~~~~~~~~v~~~~~-~~i~~~i~~~Gy~~~   62 (67)
T 2kyz_A            2 RYVLYVPDISCNHCKMRISKALEEL-GVKNYEVSVEEKKVVVETENL-DSVLKKLEEIDYPVE   62 (67)
T ss_dssp             EEEEECGGGGSHHHHHHHHHHHHHH-TCSEEEEETTTTEEEEECSCH-HHHHHHHHTTTCCCC
T ss_pred             eEEEEECCcCcHHHHHHHHHHHHHc-CCeEEEEECCCCEEEEEECCH-HHHHHHHHHcCCcee
Confidence            367999 999999999999999999 999999999999999998755 8888899886 7653

>2kt2_A Mercuric reductase; nmera, MERA, HMA domain, mercuric resist metal-binding, oxidoreductase; NMR {Pseudomonas aeruginosa} PDB: 2kt3_A

Probab=99.03  E-value=4.3e-10  Score=77.96  Aligned_cols=60  Identities=18%  Similarity=0.432  Sum_probs=53.8

Q ss_pred             EEEE-eecchhhHHHHHHHhhccCCcceeEEecCCCEEEEEec--CCHHHHHHHHHhh-cCeeE
Q 022356          217 VLRV-SLHCKGCEGKVRKHLSRMKGVSSFNIDFAAKKVTVVGD--VTPLSVLASISKV-KNAQF  276 (298)
Q Consensus       217 vLkV-gM~C~gCa~KIeKAL~kIeGVesV~VDl~skkVtV~G~--vdp~eLlkaL~Kl-K~Ael  276 (298)
                      .|.| ||+|++|+.+|+++|.+++||..+.||+..++++|..+  .+.+.|.++|+++ |.+.+
T Consensus         3 ~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~i~~~i~~~Gy~~~~   66 (69)
T 2kt2_A            3 HLKITGMTCDSCAAHVKEALEKVPGVQSALVSYPKGTAQLAIVPGTSPDALTAAVAGLGYKATL   66 (69)
T ss_dssp             CEEEESSCSTHHHHHHHHHHHHSTTEEEEEEETTTTEEEEEECTTSCHHHHHHHHHTTTSEEEC
T ss_pred             EEEECCcccHHHHHHHHHHHHcCCCeeEEEEEccCCEEEEEECCCCCHHHHHHHHHHCCCceEe
Confidence            5889 99999999999999999999999999999999999854  5788999999987 76654

>2ldi_A Zinc-transporting ATPase; metal homeostasis, metallochaperones, hydrolase; NMR {Synechocystis SP}

Probab=99.03  E-value=5.5e-10  Score=76.42  Aligned_cols=62  Identities=23%  Similarity=0.489  Sum_probs=55.0

Q ss_pred             ceEEEEEE-eecchhhHHHHHHHhhccCCcceeEEecCCCEEEEEec---CCHHHHHHHHHhh-cCe
Q 022356          213 NQVVVLRV-SLHCKGCEGKVRKHLSRMKGVSSFNIDFAAKKVTVVGD---VTPLSVLASISKV-KNA  274 (298)
Q Consensus       213 mqtVvLkV-gM~C~gCa~KIeKAL~kIeGVesV~VDl~skkVtV~G~---vdp~eLlkaL~Kl-K~A  274 (298)
                      ++++.|.| ||+|.+|+.+|+++|.+++||..+.+|+..++++|..+   ++.+.|.++|+.+ |.+
T Consensus         2 ~~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~   68 (71)
T 2ldi_A            2 LKTQQMQVGGMRCAACASSIERALERLKGVAEASVTVATGRLTVTYDPKQVSEITIQERIAALGYTL   68 (71)
T ss_dssp             CEEEEEEEETCTTSGGGHHHHTGGGGCSSEEEEEEETTTTEEEEEECTTTCCTHHHHHHHHTTTCEE
T ss_pred             cEEEEEEECCccCHHHHHHHHHHHhcCCCeeEEEEEecCCEEEEEECCCCCCHHHHHHHHHHcCCCc
Confidence            56678999 99999999999999999999999999999999999853   5778899999886 654

>1yjr_A Copper-transporting ATPase 1; metallochaperone, protein-protein interaction, copper(I), metal homeostasis, structural proteomics in europe, spine; NMR {Homo sapiens} PDB: 1yjt_A 1yju_A 1yjv_A

Probab=99.02  E-value=7.7e-10  Score=77.39  Aligned_cols=63  Identities=21%  Similarity=0.460  Sum_probs=55.5

Q ss_pred             eEEEEEE-eecchhhHHHHHHHhhccCCcceeEEecCCCEEEEEec---CCHHHHHHHHHhh-cCeeE
Q 022356          214 QVVVLRV-SLHCKGCEGKVRKHLSRMKGVSSFNIDFAAKKVTVVGD---VTPLSVLASISKV-KNAQF  276 (298)
Q Consensus       214 qtVvLkV-gM~C~gCa~KIeKAL~kIeGVesV~VDl~skkVtV~G~---vdp~eLlkaL~Kl-K~Ael  276 (298)
                      .++.|.| ||+|.+|+.+|+++|.+++||..+.+|+..++++|..+   ++.+.|.++|+.+ |.+.+
T Consensus         4 ~~~~~~v~gm~C~~c~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~~   71 (75)
T 1yjr_A            4 GVLELVVRGMTCASCVHKIESSLTKHRGILYCSVALATNKAHIKYDPEIIGPRDIIHTIESLGFEPSL   71 (75)
T ss_dssp             CCEEEEEETCCTTTHHHHHHHHHTTSTTEEEEEEETTTTEEEEEECTTTTHHHHHHHHHHHHHCEEEE
T ss_pred             eEEEEEECCcccHHHHHHHHHHHHcCCCEEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHcCCCcee
Confidence            4568999 99999999999999999999999999999999999864   4568899999887 77654

>1p6t_A Potential copper-transporting ATPase; COPA, P-type ATPase, water-soluble region, beta-alpha-beta- beta-alpha-beta fold; NMR {Bacillus subtilis} SCOP: d.58.17.1 d.58.17.1 PDB: 2rml_A

Probab=99.01  E-value=1.1e-09  Score=87.34  Aligned_cols=70  Identities=17%  Similarity=0.400  Sum_probs=62.0

Q ss_pred             eEEEEEE-eecchhhHHHHHHHhhccCCcceeEEecCCCEEEEEe---cCCHHHHHHHHHhh-cCeeECCCCccC
Q 022356          214 QVVVLRV-SLHCKGCEGKVRKHLSRMKGVSSFNIDFAAKKVTVVG---DVTPLSVLASISKV-KNAQFWPAAAAA  283 (298)
Q Consensus       214 qtVvLkV-gM~C~gCa~KIeKAL~kIeGVesV~VDl~skkVtV~G---~vdp~eLlkaL~Kl-K~Aelwp~~~~~  283 (298)
                      .++.|.| ||+|.+|+.+|+++|.+++||..+.||+..++++|..   .++++.|.++|+.+ |.+.++......
T Consensus        74 ~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~~~~~~~  148 (151)
T 1p6t_A           74 EKAEFDIEGMTCAACANRIEKRLNKIEGVANAPVNFALETVTVEYNPKEASVSDLKEAVDKLGYKLKLKGEQDSI  148 (151)
T ss_dssp             EEEEEEESSCCSSSHHHHHHHHHTTSSSEEECCEETTTTEEEEEECTTTCCHHHHHHHHHHHTCCEEESCSSSSC
T ss_pred             cccEEEecCCCCHHHHHHHHHHHhcCCCceEEEEEccCCEEEEEECCCCCCHHHHHHHHHHcCCCeEEcCccccc
Confidence            5688999 9999999999999999999999999999999999985   46889999999997 988887554433

>2ew9_A Copper-transporting ATPase 2; copper trafficking, ferrodoxin-like fold, structural genomics, structural proteomics in europe, spine, hydrolase; NMR {Homo sapiens}

Probab=99.00  E-value=1.2e-09  Score=86.51  Aligned_cols=64  Identities=20%  Similarity=0.422  Sum_probs=57.9

Q ss_pred             eEEEEEE-eecchhhHHHHHHHhhccCCcceeEEecCCCEEEEEec---CCHHHHHHHHHhh-cCeeEC
Q 022356          214 QVVVLRV-SLHCKGCEGKVRKHLSRMKGVSSFNIDFAAKKVTVVGD---VTPLSVLASISKV-KNAQFW  277 (298)
Q Consensus       214 qtVvLkV-gM~C~gCa~KIeKAL~kIeGVesV~VDl~skkVtV~G~---vdp~eLlkaL~Kl-K~Aelw  277 (298)
                      .++.|.| ||+|++|+.+|+++|.+++||..+.||+..++++|..+   +++++|.++|+++ |.++++
T Consensus        80 ~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~  148 (149)
T 2ew9_A           80 GNIELTITGMTCASCVHNIESKLTRTNGITYASVALATSKALVKFDPEIIGPRDIIKIIEEIGFHASLA  148 (149)
T ss_dssp             SEEEEEEESCCSHHHHHHHHHHHHHSSSCCEEEEETTTTEEEEECCTTTSCHHHHHHHHHHHTCEEECC
T ss_pred             ceeEEEEEeccCHHHHHHHHHHHhcCCCeEEEEEEcCCCEEEEEECCCCCCHHHHHHHHHhCCCceEec
Confidence            4678999 99999999999999999999999999999999999864   6789999999987 877654

>2aj0_A Probable cadmium-transporting ATPase; ferrodoxin-like fold, beta-alpha-beta-BETA-alpha-beta, metal binding protein, hydrolase; NMR {Listeria monocytogenes} PDB: 2aj1_A

Probab=98.99  E-value=8.7e-10  Score=77.69  Aligned_cols=63  Identities=25%  Similarity=0.585  Sum_probs=52.3

Q ss_pred             ceEEEEEE-eecchhhHHHHHHHhhccCCcceeEEecCCCEEEEEecCCHHHHHHHHHhh-cCe--eECCC
Q 022356          213 NQVVVLRV-SLHCKGCEGKVRKHLSRMKGVSSFNIDFAAKKVTVVGDVTPLSVLASISKV-KNA--QFWPA  279 (298)
Q Consensus       213 mqtVvLkV-gM~C~gCa~KIeKAL~kIeGVesV~VDl~skkVtV~G~vdp~eLlkaL~Kl-K~A--elwp~  279 (298)
                      +++++|.| ||+|.+|+.+|+++|.+++||..+.||+..++++|.++.+    .+.|+++ |.+  +.|++
T Consensus         2 ~~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~----~~~i~~~Gy~~~~~~~~~   68 (71)
T 2aj0_A            2 AEKTVYRVDGLSCTNCAAKFERNVKEIEGVTEAIVNFGASKITVTGEAS----IQQVEQAGAFEHLKIIPE   68 (71)
T ss_dssp             CCEEEEEEESCCCHHHHHHHHHHHHHSTTEEEEEECCSSEEEEEEESCC----HHHHHHHHTTTTCEEECC
T ss_pred             CeEEEEEECCcccHHHHHHHHHHHHcCCCeEEEEEECCCCEEEEEecCc----HHHHHHhCCCcccccCCc
Confidence            35778999 9999999999999999999999999999999999998765    3456665 643  44544

>1qup_A Superoxide dismutase 1 copper chaperone; two domains, beta-alpha-beta-BETA-alpha-beta and beta barrel; 1.80A {Saccharomyces cerevisiae} SCOP: b.1.8.1 d.58.17.1

Probab=98.92  E-value=2.5e-09  Score=95.70  Aligned_cols=67  Identities=21%  Similarity=0.495  Sum_probs=62.0

Q ss_pred             eEEEEEEeecchhhHHHHHHHhhccCCcceeEEecCCCEEEEEecCCHHHHHHHHHhh-cCeeECCCC
Q 022356          214 QVVVLRVSLHCKGCEGKVRKHLSRMKGVSSFNIDFAAKKVTVVGDVTPLSVLASISKV-KNAQFWPAA  280 (298)
Q Consensus       214 qtVvLkVgM~C~gCa~KIeKAL~kIeGVesV~VDl~skkVtV~G~vdp~eLlkaL~Kl-K~Aelwp~~  280 (298)
                      .+++|+|.|+|++|+.+|+++|.+++||.++.||+..++++|.+.+++++|.++|+++ |.++++...
T Consensus         6 ~~~~l~V~MtC~~Ca~~IekaL~~l~GV~~v~Vnl~~~~v~V~~~~~~~~I~~aI~~~Gy~a~~~~~~   73 (222)
T 1qup_A            6 YEATYAIPMHCENCVNDIKACLKNVPGINSLNFDIEQQIMSVESSVAPSTIINTLRNCGKDAIIRGAG   73 (222)
T ss_dssp             EEEEEECCCCSTTHHHHHHHHHTTCTTEEEEEEETTTTEEEEEESSCHHHHHHHHHHTTCCCEEECCS
T ss_pred             eEEEEEEccccHHHHHHHHHHHhcCCCeeEEEEEcCCCEEEEeccCCHHHHHHHHHHcCCccccccCC
Confidence            4667888999999999999999999999999999999999999989999999999998 999887654

>2rop_A Copper-transporting ATPase 2; wilson protein, mobility, protein-protein interaction, alternative splicing, ATP-binding, copper transport cytoplasm; NMR {Homo sapiens}

Probab=98.84  E-value=1.1e-08  Score=86.90  Aligned_cols=67  Identities=18%  Similarity=0.410  Sum_probs=59.4

Q ss_pred             ceEEEEEE-eecchhhHHHHHHHhhccCCcceeEEecCCCEEEEEec---CCHHHHHHHHHhh-cCeeECCC
Q 022356          213 NQVVVLRV-SLHCKGCEGKVRKHLSRMKGVSSFNIDFAAKKVTVVGD---VTPLSVLASISKV-KNAQFWPA  279 (298)
Q Consensus       213 mqtVvLkV-gM~C~gCa~KIeKAL~kIeGVesV~VDl~skkVtV~G~---vdp~eLlkaL~Kl-K~Aelwp~  279 (298)
                      ..++.|.| ||+|.+|+.+|+++|.+++||..+.||+..++++|..+   ++.+.|.++|+++ |.+.++..
T Consensus       121 ~~~~~l~v~Gm~C~~C~~~ie~~l~~~~GV~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~~~  192 (202)
T 2rop_A          121 CSTTLIAIAGMTCASCVHSIEGMISQLEGVQQISVSLAEGTATVLYNPAVISPEELRAAIEDMGFEASVVSE  192 (202)
T ss_dssp             CEEEEEEESCCCSTHHHHHHHHHGGGSSSEEEEEEETTTTEEEEEECTTTCCHHHHHHHHHHHTSCEEEC--
T ss_pred             ceEEEEEECCccCHHHHHHHHHHHHcCCCeEEEEEEccCCEEEEEECCCCCCHHHHHHHHHHcCCceEEcCC
Confidence            35789999 99999999999999999999999999999999999853   6889999999987 98888653

>2ew9_A Copper-transporting ATPase 2; copper trafficking, ferrodoxin-like fold, structural genomics, structural proteomics in europe, spine, hydrolase; NMR {Homo sapiens}

Probab=98.82  E-value=1.4e-08  Score=80.37  Aligned_cols=65  Identities=22%  Similarity=0.388  Sum_probs=58.6

Q ss_pred             ceEEEEEE-eecchhhHHHHHHHhhccCCcceeEEecCCCEEEEEe---cCCHHHHHHHHHhh-cCeeEC
Q 022356          213 NQVVVLRV-SLHCKGCEGKVRKHLSRMKGVSSFNIDFAAKKVTVVG---DVTPLSVLASISKV-KNAQFW  277 (298)
Q Consensus       213 mqtVvLkV-gM~C~gCa~KIeKAL~kIeGVesV~VDl~skkVtV~G---~vdp~eLlkaL~Kl-K~Aelw  277 (298)
                      |++++|.| ||+|.+|+.+|+++|.+++||..+.||+..+++.|..   .++.+.|.++|++. |.+.+.
T Consensus         3 ~~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~~~   72 (149)
T 2ew9_A            3 PQKCFLQIKGMTCASCVSNIERNLQKEAGVLSVLVALMAGKAEIKYDPEVIQPLEIAQFIQDLGFEAAVM   72 (149)
T ss_dssp             CEEEEEEEECCCSSSHHHHHHHHHHTTSSCCCEEEETTTTEEEEEECTTTCCHHHHHHHHHHHTCEEEEC
T ss_pred             cEEEEEEECCeecHHHHHHHHHHHhcCCCcEEEEEEecCCEEEEEEcCCCCCHHHHHHHHhcCCCceEee
Confidence            78899999 9999999999999999999999999999999999975   36788999999987 877654

>1jk9_B CCS, copper chaperone for superoxide dismutase; protein-protein complex, heterodimer, metallochaperone, amyotrophic lateral sclerosis; 2.90A {Saccharomyces cerevisiae} SCOP: b.1.8.1 d.58.17.1

Probab=98.78  E-value=1e-08  Score=93.55  Aligned_cols=67  Identities=21%  Similarity=0.495  Sum_probs=61.5

Q ss_pred             ceEEEEEEeecchhhHHHHHHHhhccCCcceeEEecCCCEEEEEecCCHHHHHHHHHhh-cCeeECCC
Q 022356          213 NQVVVLRVSLHCKGCEGKVRKHLSRMKGVSSFNIDFAAKKVTVVGDVTPLSVLASISKV-KNAQFWPA  279 (298)
Q Consensus       213 mqtVvLkVgM~C~gCa~KIeKAL~kIeGVesV~VDl~skkVtV~G~vdp~eLlkaL~Kl-K~Aelwp~  279 (298)
                      ..+++|.|.|+|++|+.+|+++|.+++||..+.||+.+++++|.+.+++++|.++|+++ |.+.++..
T Consensus         6 ~~~~~l~V~MtC~~Ca~~IekaL~~l~GV~~v~Vnl~~~~v~V~~~~~~~~I~~aIe~~Gy~a~~~~~   73 (249)
T 1jk9_B            6 TYEATYAIPMHCENCVNDIKACLKNVPGINSLNFDIEQQIMSVESSVAPSTIINTLRNCGKDAIIRGA   73 (249)
T ss_dssp             CEEEEEECCCCSSSHHHHHHHHHTTCTTEEEEEEETTTTEEEEEESSCHHHHHHHHHTTTCCCEEEEE
T ss_pred             ceeEEEEEeeccHHHHHHHHHHHhccCCeeEEEEEcCCCeEEEecCCCHHHHHHHHHHhCCCcccccC
Confidence            35678888999999999999999999999999999999999999989999999999998 98888653

>2rop_A Copper-transporting ATPase 2; wilson protein, mobility, protein-protein interaction, alternative splicing, ATP-binding, copper transport cytoplasm; NMR {Homo sapiens}

Probab=98.59  E-value=8.5e-08  Score=81.51  Aligned_cols=61  Identities=23%  Similarity=0.513  Sum_probs=53.4

Q ss_pred             CCceEEEEEE-eecchhhHHHHHHHhhccCCcceeEEecCCCEEEEEec---CCHHHHHHHHHhh
Q 022356          211 PSNQVVVLRV-SLHCKGCEGKVRKHLSRMKGVSSFNIDFAAKKVTVVGD---VTPLSVLASISKV  271 (298)
Q Consensus       211 ~~mqtVvLkV-gM~C~gCa~KIeKAL~kIeGVesV~VDl~skkVtV~G~---vdp~eLlkaL~Kl  271 (298)
                      ..+.+++|.| ||+|.+|+.+|+++|..++||..+.||+..++++|..+   ++++.|.++|+.+
T Consensus        17 ~~~~~~~l~v~Gm~C~~C~~~ie~~l~~~~GV~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~   81 (202)
T 2rop_A           17 SHVVTLQLRIDGMHCKSCVLNIEENIGQLLGVQSIQVSLENKTAQVKYDPSCTSPVALQRAIEAL   81 (202)
T ss_dssp             ---CEEEEEEESGGGSTHHHHHHHHTTSBTTEEEEEEETTTTEEEEEECTTTCCHHHHHHHHTTS
T ss_pred             CccEEEEEEECCeEcHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHh
Confidence            3467788999 99999999999999999999999999999999999853   6788899999875

>1p6t_A Potential copper-transporting ATPase; COPA, P-type ATPase, water-soluble region, beta-alpha-beta- beta-alpha-beta fold; NMR {Bacillus subtilis} SCOP: d.58.17.1 d.58.17.1 PDB: 2rml_A

Probab=98.45  E-value=4.7e-07  Score=72.09  Aligned_cols=62  Identities=26%  Similarity=0.557  Sum_probs=54.3

Q ss_pred             CceEEEEEE-eecchhhHHHHHHHhhccCCcceeEEecCCCEEEEEec---CCHHHHHHHHHhh-cC
Q 022356          212 SNQVVVLRV-SLHCKGCEGKVRKHLSRMKGVSSFNIDFAAKKVTVVGD---VTPLSVLASISKV-KN  273 (298)
Q Consensus       212 ~mqtVvLkV-gM~C~gCa~KIeKAL~kIeGVesV~VDl~skkVtV~G~---vdp~eLlkaL~Kl-K~  273 (298)
                      .++++.|.| ||+|.+|+.+|+++|..++||..+.+++..+++.|..+   ++...|.++|+.. |.
T Consensus         4 ~~~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~   70 (151)
T 1p6t_A            4 EQKEIAMQVSGMTCAACAARIEKGLKRMPGVTDANVNLATETVNVIYDPAETGTAAIQEKIEKLGYH   70 (151)
T ss_dssp             CCEEEEEEEESCCSSHHHHHHHHHHTTSSSEEEEEEEGGGTEEEEEECTTTSCHHHHHHHHHHHTCE
T ss_pred             cceEEEEEECCCcCHHHHHHHHHHHhcCCCeeEEEEEccCCEEEEEEcCCcCCHHHHHHHHHHcCCc
Confidence            456778999 99999999999999999999999999999999999743   5778888888876 53

>3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus}

Probab=98.30  E-value=1e-06  Score=90.10  Aligned_cols=61  Identities=13%  Similarity=0.278  Sum_probs=55.8

Q ss_pred             EEEEEE-eecchhhHHHHHHHhhccCCcceeEEecCCCEEEEEe---cCCHHHHHHHHHhh-cCee
Q 022356          215 VVVLRV-SLHCKGCEGKVRKHLSRMKGVSSFNIDFAAKKVTVVG---DVTPLSVLASISKV-KNAQ  275 (298)
Q Consensus       215 tVvLkV-gM~C~gCa~KIeKAL~kIeGVesV~VDl~skkVtV~G---~vdp~eLlkaL~Kl-K~Ae  275 (298)
                      +++|+| ||+|++|+.+|+++|.+++||.++.||+.+++++|+.   .++.++|.++|++. |.+.
T Consensus         3 ~~~l~V~GM~Ca~Ca~~Ie~~L~~~~GV~~v~Vnl~~~~~~V~~d~~~~~~~~i~~ai~~~Gy~~~   68 (723)
T 3j09_A            3 ERTVRVTGMTCAMCVKSIETAVGSLEGVEEVRVNLATETAFIRFDEKRIDFETIKRVIEDLGYGVV   68 (723)
T ss_dssp             CEEEEEETCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEECTTTCCHHHHHHHHHHHCCEES
T ss_pred             eEEEEeCCCCchHHHHHHHHHHhcCCCceEEEEEcCCCEEEEEeCCCcCCHHHHHHHHHhcCCccc
Confidence            468999 9999999999999999999999999999999999985   36899999999997 7764

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	298
d1cc8a_	72	d.58.17.1 (A:) ATX1 metallochaperone protein (ATOX	6e-12
d1qupa2	72	d.58.17.1 (A:2-73) Copper chaperone for superoxide	8e-12
d1osda_	72	d.58.17.1 (A:) Mercuric ion binding protein MerP {	3e-11
d1fe0a_	66	d.58.17.1 (A:) ATX1 metallochaperone protein (ATOX	1e-10
d1p6ta1	72	d.58.17.1 (A:1-72) Potential copper-translocating	2e-10
d2aw0a_	72	d.58.17.1 (A:) Menkes copper-transporting ATPase {	2e-10
d2qifa1	69	d.58.17.1 (A:1-69) Copper chaperone {Bacillus subt	1e-09
d1sb6a_	64	d.58.17.1 (A:) Copper chaperone {Synechocystis sp.	2e-09
d1kvja_	79	d.58.17.1 (A:) Menkes copper-transporting ATPase {	2e-09
d1mwza_	73	d.58.17.1 (A:) Metal ion-transporting ATPase ZntA,	3e-09
d2ggpb1	72	d.58.17.1 (B:1-72) Copper transporter domain ccc2a	7e-09
d1p6ta2	79	d.58.17.1 (A:73-151) Potential copper-translocatin	9e-09
d1cpza_	68	d.58.17.1 (A:) Copper chaperone {Enterococcus hira	2e-08
d1q8la_	84	d.58.17.1 (A:) Menkes copper-transporting ATPase {	4e-08

>d1cc8a_ d.58.17.1 (A:) ATX1 metallochaperone protein (ATOX1) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 72

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: ATX1 metallochaperone protein (ATOX1)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 57.9 bits (140), Expect = 6e-12
 Identities = 16/58 (27%), Positives = 26/58 (44%), Gaps = 1/58 (1%)

Query: 214 QVVVLRVSLHCKGCEGKVRKHLSRMK-GVSSFNIDFAAKKVTVVGDVTPLSVLASISK 270
           +     V + C GC G V K L++++  VS  +I    + V V   +    +L  I K
Sbjct: 4   KHYQFNVVMTCSGCSGAVNKVLTKLEPDVSKIDISLEKQLVDVYTTLPYDFILEKIKK 61

>d1qupa2 d.58.17.1 (A:2-73) Copper chaperone for superoxide dismutase, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 72

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Copper chaperone for superoxide dismutase, N-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 57.9 bits (140), Expect = 8e-12
 Identities = 11/55 (20%), Positives = 27/55 (49%)

Query: 216 VVLRVSLHCKGCEGKVRKHLSRMKGVSSFNIDFAAKKVTVVGDVTPLSVLASISK 270
               + +HC+ C   ++  L  + G++S N D   + ++V   V P +++ ++  
Sbjct: 8   ATYAIPMHCENCVNDIKACLKNVPGINSLNFDIEQQIMSVESSVAPSTIINTLRN 62

>d1osda_ d.58.17.1 (A:) Mercuric ion binding protein MerP {Ralstonia metallidurans CH34 [TaxId: 266264]} Length = 72

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Mercuric ion binding protein MerP
species: Ralstonia metallidurans CH34 [TaxId: 266264]

 Score = 56.3 bits (136), Expect = 3e-11
 Identities = 18/66 (27%), Positives = 31/66 (46%), Gaps = 1/66 (1%)

Query: 212 SNQVVVLRVS-LHCKGCEGKVRKHLSRMKGVSSFNIDFAAKKVTVVGDVTPLSVLASISK 270
           + Q V L V  + C  C   V+K +S+++GVS  ++ F  ++  V  D    SV      
Sbjct: 1   ATQTVTLSVPGMTCSACPITVKKAISKVEGVSKVDVTFETRQAVVTFDDAKTSVQKLTKA 60

Query: 271 VKNAQF 276
             +A +
Sbjct: 61  TADAGY 66

>d1fe0a_ d.58.17.1 (A:) ATX1 metallochaperone protein (ATOX1) {Human (Homo sapiens), HAH1 [TaxId: 9606]} Length = 66

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: ATX1 metallochaperone protein (ATOX1)
species: Human (Homo sapiens), HAH1 [TaxId: 9606]

 Score = 54.5 bits (131), Expect = 1e-10
 Identities = 17/61 (27%), Positives = 32/61 (52%), Gaps = 2/61 (3%)

Query: 218 LRVSLHCKGCEGKVRKHLSRMKGVSSFNIDFAAKKVTVVGDVTPLSVLASISKV-KNAQF 276
             V + C GC   V + L+++ GV  ++ID   KKV +  + +  ++LA++ K  K   +
Sbjct: 5   FSVDMTCGGCAEAVSRVLNKLGGV-KYDIDLPNKKVCIESEHSMDTLLATLKKTGKTVSY 63

Query: 277 W 277
            
Sbjct: 64  L 64

>d1p6ta1 d.58.17.1 (A:1-72) Potential copper-translocating P-type ATPase CopA (YvgX) {Bacillus subtilis [TaxId: 1423]} Length = 72

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Potential copper-translocating P-type ATPase CopA (YvgX)
species: Bacillus subtilis [TaxId: 1423]

 Score = 53.6 bits (129), Expect = 2e-10
 Identities = 17/65 (26%), Positives = 32/65 (49%), Gaps = 1/65 (1%)

Query: 213 NQVVVLRVS-LHCKGCEGKVRKHLSRMKGVSSFNIDFAAKKVTVVGDVTPLSVLASISKV 271
            + + ++VS + C  C  ++ K L RM GV+  N++ A + V V+ D       A   K+
Sbjct: 5   QKEIAMQVSGMTCAACAARIEKGLKRMPGVTDANVNLATETVNVIYDPAETGTAAIQEKI 64

Query: 272 KNAQF 276
           +   +
Sbjct: 65  EKLGY 69

>d2aw0a_ d.58.17.1 (A:) Menkes copper-transporting ATPase {Human (Homo sapiens) [TaxId: 9606]} Length = 72

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Menkes copper-transporting ATPase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 53.7 bits (129), Expect = 2e-10
 Identities = 14/64 (21%), Positives = 24/64 (37%), Gaps = 1/64 (1%)

Query: 214 QVVVLRVS-LHCKGCEGKVRKHLSRMKGVSSFNIDFAAKKVTVVGDVTPLSVLASISKVK 272
           Q  V+ +  + C  C   +   +S+  GV S  +  A    TV  D    S       ++
Sbjct: 3   QETVINIDGMTCNSCVQSIEGVISKKPGVKSIRVSLANSNGTVEYDPLLTSPETLRGAIE 62

Query: 273 NAQF 276
           +  F
Sbjct: 63  DMGF 66

>d2qifa1 d.58.17.1 (A:1-69) Copper chaperone {Bacillus subtilis, CopZ [TaxId: 1423]} Length = 69

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Copper chaperone
species: Bacillus subtilis, CopZ [TaxId: 1423]

 Score = 51.3 bits (123), Expect = 1e-09
 Identities = 15/62 (24%), Positives = 29/62 (46%), Gaps = 1/62 (1%)

Query: 216 VVLRVS-LHCKGCEGKVRKHLSRMKGVSSFNIDFAAKKVTVVGDVTPLSVLASISKVKNA 274
             L+V  + C+ C   V   +  + GVS+ +++  A KV V  D   +SV      +++ 
Sbjct: 4   KTLQVEGMSCQHCVKAVETSVGELDGVSAVHVNLEAGKVDVSFDADKVSVKDIADAIEDQ 63

Query: 275 QF 276
            +
Sbjct: 64  GY 65

>d1sb6a_ d.58.17.1 (A:) Copper chaperone {Synechocystis sp. pcc 6803, Scatx1 [TaxId: 1148]} Length = 64

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Copper chaperone
species: Synechocystis sp. pcc 6803, Scatx1 [TaxId: 1148]

 Score = 51.1 bits (122), Expect = 2e-09
 Identities = 12/56 (21%), Positives = 25/56 (44%), Gaps = 1/56 (1%)

Query: 216 VVLRVS-LHCKGCEGKVRKHLSRMKGVSSFNIDFAAKKVTVVGDVTPLSVLASISK 270
           + L V  + C+ C   V K +      ++  +D  +KKVT+   +    +  +I+ 
Sbjct: 3   IQLTVPTIACEACAEAVTKAVQNEDAQATVQVDLTSKKVTITSALGEEQLRTAIAS 58

>d1kvja_ d.58.17.1 (A:) Menkes copper-transporting ATPase {Human (Homo sapiens) [TaxId: 9606]} Length = 79

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Menkes copper-transporting ATPase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 51.0 bits (122), Expect = 2e-09
 Identities = 10/70 (14%), Positives = 24/70 (34%), Gaps = 1/70 (1%)

Query: 208 EKPPSNQVVVLRVS-LHCKGCEGKVRKHLSRMKGVSSFNIDFAAKKVTVVGDVTPLSVLA 266
           +       V + V  + C  C   + + + ++ GV    +    K  T++ D    +   
Sbjct: 2   DPSMGVNSVTISVEGMTCNSCVWTIEQQIGKVNGVHHIKVSLEEKNATIIYDPKLQTPKT 61

Query: 267 SISKVKNAQF 276
               + +  F
Sbjct: 62  LQEAIDDMGF 71

>d1mwza_ d.58.17.1 (A:) Metal ion-transporting ATPase ZntA, N-terminal domain {Escherichia coli [TaxId: 562]} Length = 73

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Metal ion-transporting ATPase ZntA, N-terminal domain
species: Escherichia coli [TaxId: 562]

 Score = 50.6 bits (121), Expect = 3e-09
 Identities = 16/66 (24%), Positives = 30/66 (45%), Gaps = 3/66 (4%)

Query: 212 SNQVVVLRVS-LHCKGCEGKVRKHLSRMKGVSSFNIDFAAKKVTVVGDVTPLSVLASISK 270
           S      +VS + C  C  KV   + ++ GV+   + FA +K+ V  D    + +   S 
Sbjct: 1   SGTRYSWKVSGMDCAACARKVENAVRQLAGVNQVQVLFATEKLVVDADNDIRAQV--ESA 58

Query: 271 VKNAQF 276
           ++ A +
Sbjct: 59  LQKAGY 64

>d2ggpb1 d.58.17.1 (B:1-72) Copper transporter domain ccc2a {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 72

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Copper transporter domain ccc2a
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 49.4 bits (118), Expect = 7e-09
 Identities = 15/60 (25%), Positives = 25/60 (41%), Gaps = 3/60 (5%)

Query: 214 QVVVLRVS-LHCKGCEGKVRKHLSRMKGVSSFNIDFAAKKVTVV--GDVTPLSVLASISK 270
           + V+L V  + C  C   +   L  +KGV+  +I     +  V    +VT  S+   I  
Sbjct: 2   REVILAVHGMTCSACTNTINTQLRALKGVTKCDISLVTNECQVTYDNEVTADSIKEIIED 61

>d1p6ta2 d.58.17.1 (A:73-151) Potential copper-translocating P-type ATPase CopA (YvgX) {Bacillus subtilis [TaxId: 1423]} Length = 79

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Potential copper-translocating P-type ATPase CopA (YvgX)
species: Bacillus subtilis [TaxId: 1423]

 Score = 49.5 bits (118), Expect = 9e-09
 Identities = 14/64 (21%), Positives = 30/64 (46%), Gaps = 1/64 (1%)

Query: 214 QVVVLRVS-LHCKGCEGKVRKHLSRMKGVSSFNIDFAAKKVTVVGDVTPLSVLASISKVK 272
           +     +  + C  C  ++ K L++++GV++  ++FA + VTV  +    SV      V 
Sbjct: 2   EKAEFDIEGMTCAACANRIEKRLNKIEGVANAPVNFALETVTVEYNPKEASVSDLKEAVD 61

Query: 273 NAQF 276
              +
Sbjct: 62  KLGY 65

>d1cpza_ d.58.17.1 (A:) Copper chaperone {Enterococcus hirae [TaxId: 1354]} Length = 68

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Copper chaperone
species: Enterococcus hirae [TaxId: 1354]

 Score = 47.9 bits (114), Expect = 2e-08
 Identities = 9/60 (15%), Positives = 20/60 (33%), Gaps = 1/60 (1%)

Query: 218 LRVS-LHCKGCEGKVRKHLSRMKGVSSFNIDFAAKKVTVVGDVTPLSVLASISKVKNAQF 276
             V  + C  C  ++ + + R+ GV    +    +K  V  D   +        +    +
Sbjct: 4   FSVKGMSCNHCVARIEEAVGRISGVKKVKVQLKKEKAVVKFDEANVQATEICQAINELGY 63

>d1q8la_ d.58.17.1 (A:) Menkes copper-transporting ATPase {Human (Homo sapiens) [TaxId: 9606]} Length = 84

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Menkes copper-transporting ATPase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 47.7 bits (113), Expect = 4e-08
 Identities = 12/71 (16%), Positives = 29/71 (40%), Gaps = 1/71 (1%)

Query: 207 SEKPPSNQVVVLRVS-LHCKGCEGKVRKHLSRMKGVSSFNIDFAAKKVTVVGDVTPLSVL 265
           S       V+ ++V  + C  C   +   + +++GV    +    ++ T+V     +SV 
Sbjct: 2   SMAQAGEVVLKMKVEGMTCHSCTSTIEGKIGKLQGVQRIKVSLDNQEATIVYQPHLISVE 61

Query: 266 ASISKVKNAQF 276
               +++   F
Sbjct: 62  EMKKQIEAMGF 72

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	298
d1fe0a_	66	ATX1 metallochaperone protein (ATOX1) {Human (Homo	99.6
d1qupa2	72	Copper chaperone for superoxide dismutase, N-termi	99.6
d1cc8a_	72	ATX1 metallochaperone protein (ATOX1) {Baker's yea	99.59
d1sb6a_	64	Copper chaperone {Synechocystis sp. pcc 6803, Scat	99.49
d2ggpb1	72	Copper transporter domain ccc2a {Baker's yeast (Sa	99.47
d1osda_	72	Mercuric ion binding protein MerP {Ralstonia metal	99.46
d2aw0a_	72	Menkes copper-transporting ATPase {Human (Homo sap	99.46
d2qifa1	69	Copper chaperone {Bacillus subtilis, CopZ [TaxId:	99.45
d1cpza_	68	Copper chaperone {Enterococcus hirae [TaxId: 1354]	99.43
d1p6ta2	79	Potential copper-translocating P-type ATPase CopA	99.41
d1q8la_	84	Menkes copper-transporting ATPase {Human (Homo sap	99.39
d1kvja_	79	Menkes copper-transporting ATPase {Human (Homo sap	99.39
d1p6ta1	72	Potential copper-translocating P-type ATPase CopA	99.36
d1mwza_	73	Metal ion-transporting ATPase ZntA, N-terminal dom	99.35

>d1fe0a_ d.58.17.1 (A:) ATX1 metallochaperone protein (ATOX1) {Human (Homo sapiens), HAH1 [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: ATX1 metallochaperone protein (ATOX1)
species: Human (Homo sapiens), HAH1 [TaxId: 9606]

Probab=99.60  E-value=9.5e-16  Score=112.45  Aligned_cols=63  Identities=27%  Similarity=0.540  Sum_probs=60.0

Q ss_pred             EEEEEEeecchhhHHHHHHHhhccCCcceeEEecCCCEEEEEecCCHHHHHHHHHhh-cCeeECC
Q 022356          215 VVVLRVSLHCKGCEGKVRKHLSRMKGVSSFNIDFAAKKVTVVGDVTPLSVLASISKV-KNAQFWP  278 (298)
Q Consensus       215 tVvLkVgM~C~gCa~KIeKAL~kIeGVesV~VDl~skkVtV~G~vdp~eLlkaL~Kl-K~Aelwp  278 (298)
                      +++|+|+|+|++|+.+|+++|.+++|| +|.||+.+++|+|+|++++++|+++|+++ |.|++|.
T Consensus         2 k~ef~V~M~C~~C~~~I~~aL~~~~gv-~v~v~~~~~~v~V~~~~~~~~i~~~I~~~Gy~a~lig   65 (66)
T d1fe0a_           2 KHEFSVDMTCGGCAEAVSRVLNKLGGV-KYDIDLPNKKVCIESEHSMDTLLATLKKTGKTVSYLG   65 (66)
T ss_dssp             EEEEEECCCSHHHHHHHHHHHHHHCSE-EEEEETTTTEEEEEESSCHHHHHHHHHTTTSCEEEEE
T ss_pred             CEEEEEccCchHHHHHHHHHHhcCCCc-EEEEEcCCCEEEEEeeCCHHHHHHHHHHhCCeEEEee
Confidence            578999999999999999999999998 69999999999999999999999999998 9999874

>d1qupa2 d.58.17.1 (A:2-73) Copper chaperone for superoxide dismutase, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Copper chaperone for superoxide dismutase, N-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.60  E-value=9.1e-16  Score=114.00  Aligned_cols=66  Identities=20%  Similarity=0.491  Sum_probs=62.3

Q ss_pred             ceEEEEEEeecchhhHHHHHHHhhccCCcceeEEecCCCEEEEEecCCHHHHHHHHHhh-cCeeECC
Q 022356          213 NQVVVLRVSLHCKGCEGKVRKHLSRMKGVSSFNIDFAAKKVTVVGDVTPLSVLASISKV-KNAQFWP  278 (298)
Q Consensus       213 mqtVvLkVgM~C~gCa~KIeKAL~kIeGVesV~VDl~skkVtV~G~vdp~eLlkaL~Kl-K~Aelwp  278 (298)
                      ..+++|.|+|+|++|+.+|+++|.+++||++|.||+.+++|+|+|.+++++|+++|++. |+|.|+.
T Consensus         5 ~~~~~f~V~M~C~~C~~~Iek~l~~~~gV~~v~vdl~~~~v~V~~~~~~~~i~~~I~~~G~~A~l~g   71 (72)
T d1qupa2           5 TYEATYAIPMHCENCVNDIKACLKNVPGINSLNFDIEQQIMSVESSVAPSTIINTLRNCGKDAIIRG   71 (72)
T ss_dssp             CEEEEEECCCCSTTHHHHHHHHHTTCTTEEEEEEETTTTEEEEEESSCHHHHHHHHHHTTCCCEEEC
T ss_pred             cEEEEEEEccCCHHHHHHHHHHHhcCCCeeEEEEECCCCEEEEEeeCCHHHHHHHHHHhCCCEEEec
Confidence            34678999999999999999999999999999999999999999999999999999998 9998874

>d1cc8a_ d.58.17.1 (A:) ATX1 metallochaperone protein (ATOX1) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: ATX1 metallochaperone protein (ATOX1)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.59  E-value=2.3e-15  Score=112.04  Aligned_cols=65  Identities=26%  Similarity=0.444  Sum_probs=60.9

Q ss_pred             CCceEEEEEEeecchhhHHHHHHHhhccC-CcceeEEecCCCEEEEEecCCHHHHHHHHHhh-cCee
Q 022356          211 PSNQVVVLRVSLHCKGCEGKVRKHLSRMK-GVSSFNIDFAAKKVTVVGDVTPLSVLASISKV-KNAQ  275 (298)
Q Consensus       211 ~~mqtVvLkVgM~C~gCa~KIeKAL~kIe-GVesV~VDl~skkVtV~G~vdp~eLlkaL~Kl-K~Ae  275 (298)
                      +++++++|+|+|+|++|+.+|+++|.+++ ||.+|.||+.+++|+|.|++++++|+++|+++ |+|.
T Consensus         1 ~~~kt~~f~V~MtC~~C~~~Ie~~L~~l~~gV~~v~v~~~~~~v~V~~~~~~~~i~~~i~~~G~~~~   67 (72)
T d1cc8a_           1 AEIKHYQFNVVMTCSGCSGAVNKVLTKLEPDVSKIDISLEKQLVDVYTTLPYDFILEKIKKTGKEVR   67 (72)
T ss_dssp             CCCEEEEEEECCCSHHHHHHHHHHHHTTTTSEEEEEEETTTTEEEEEESSCHHHHHHHHHTTSSCEE
T ss_pred             CCcEEEEEEECcCcHHHHHHHHHHHHcCcCceEEEEEECCCCEEEEeecCCHHHHHHHHHHHCCccC
Confidence            36789999999999999999999999995 99999999999999999999999999999997 8763

>d1sb6a_ d.58.17.1 (A:) Copper chaperone {Synechocystis sp. pcc 6803, Scatx1 [TaxId: 1148]}

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Copper chaperone
species: Synechocystis sp. pcc 6803, Scatx1 [TaxId: 1148]

Probab=99.49  E-value=1.3e-14  Score=105.07  Aligned_cols=61  Identities=20%  Similarity=0.433  Sum_probs=58.1

Q ss_pred             EEEEEE-eecchhhHHHHHHHhhccCCcceeEEecCCCEEEEEecCCHHHHHHHHHhh-cCee
Q 022356          215 VVVLRV-SLHCKGCEGKVRKHLSRMKGVSSFNIDFAAKKVTVVGDVTPLSVLASISKV-KNAQ  275 (298)
Q Consensus       215 tVvLkV-gM~C~gCa~KIeKAL~kIeGVesV~VDl~skkVtV~G~vdp~eLlkaL~Kl-K~Ae  275 (298)
                      +++|+| ||+|++|+.+|+++|.+++||.+|.||+.+++|+|++++++++|.++|+++ |.+|
T Consensus         2 t~~l~V~gM~C~~C~~~Ie~~l~~~~gv~~v~v~~~~~~v~v~~~~~~~~i~~~i~~~GY~ve   64 (64)
T d1sb6a_           2 TIQLTVPTIACEACAEAVTKAVQNEDAQATVQVDLTSKKVTITSALGEEQLRTAIASAGHEVE   64 (64)
T ss_dssp             EEEEECTTTTSSSCTHHHHHHHHHHCTTCEEEEETTTTEEEEESSSCHHHHHHHHHHHCCCCC
T ss_pred             eEEEEECCccchhHHHHHHHHHhcCCCeeEEEccCCCCEEEEccCCCHHHHHHHHHHcCCCCC
Confidence            578999 999999999999999999999999999999999999999999999999987 8764

>d2ggpb1 d.58.17.1 (B:1-72) Copper transporter domain ccc2a {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Copper transporter domain ccc2a
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.47  E-value=3.5e-14  Score=104.70  Aligned_cols=65  Identities=23%  Similarity=0.446  Sum_probs=60.6

Q ss_pred             eEEEEEE-eecchhhHHHHHHHhhccCCcceeEEecCCCEEEEEe--cCCHHHHHHHHHhh-cCeeECC
Q 022356          214 QVVVLRV-SLHCKGCEGKVRKHLSRMKGVSSFNIDFAAKKVTVVG--DVTPLSVLASISKV-KNAQFWP  278 (298)
Q Consensus       214 qtVvLkV-gM~C~gCa~KIeKAL~kIeGVesV~VDl~skkVtV~G--~vdp~eLlkaL~Kl-K~Aelwp  278 (298)
                      ++++|.| ||+|++|+.+|+++|.+++||.+|.||+.+++++|+.  .+++++|.++|+++ |.|+++.
T Consensus         2 k~v~l~V~GM~C~~C~~~Ie~~l~~~~gV~~v~V~~~~~~~~v~~~~~~~~~~i~~~i~~~Gy~a~~~~   70 (72)
T d2ggpb1           2 REVILAVHGMTCSACTNTINTQLRALKGVTKCDISLVTNECQVTYDNEVTADSIKEIIEDCGFDCEILR   70 (72)
T ss_dssp             EEEEEECTTCCSSTTTHHHHHHHTTSTTEEEEEECTTTCEEEEEECSSCCHHHHHHHHHHTTCCCEEEE
T ss_pred             eEEEEEECCcccHHHHHHHHHHHhcCCCceEEEEECCCCEEEEEECCCCCHHHHHHHHHHhCCCeEEcc
Confidence            5789999 9999999999999999999999999999999999984  58999999999998 9998864

>d1osda_ d.58.17.1 (A:) Mercuric ion binding protein MerP {Ralstonia metallidurans CH34 [TaxId: 266264]}

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Mercuric ion binding protein MerP
species: Ralstonia metallidurans CH34 [TaxId: 266264]

Probab=99.46  E-value=6.6e-14  Score=103.18  Aligned_cols=65  Identities=22%  Similarity=0.402  Sum_probs=60.6

Q ss_pred             ceEEEEEE-eecchhhHHHHHHHhhccCCcceeEEecCCCEEEEEe---cCCHHHHHHHHHhh-cCeeEC
Q 022356          213 NQVVVLRV-SLHCKGCEGKVRKHLSRMKGVSSFNIDFAAKKVTVVG---DVTPLSVLASISKV-KNAQFW  277 (298)
Q Consensus       213 mqtVvLkV-gM~C~gCa~KIeKAL~kIeGVesV~VDl~skkVtV~G---~vdp~eLlkaL~Kl-K~Aelw  277 (298)
                      .++++|+| ||+|++|+.+|+++|.+++||.++.||+.++++.|+.   .+++++|.++|+++ |.|+++
T Consensus         2 tqt~~l~V~Gm~C~~C~~~Ie~~l~~~~gV~~v~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~a~v~   71 (72)
T d1osda_           2 TQTVTLSVPGMTCSACPITVKKAISKVEGVSKVDVTFETRQAVVTFDDAKTSVQKLTKATADAGYPSSVK   71 (72)
T ss_dssp             EEEEEEECTTCCSTTHHHHHHHHHHTSTTEEEEEEETTTTEEEEEEETTTCCHHHHHHHHHHTTCCCEEC
T ss_pred             CeEEEEEECCcccHHHHHHHHHHHHcCCCcEEEEEEcCCCEEEEEECCCCCCHHHHHHHHHhcCCCeEeC
Confidence            36899999 9999999999999999999999999999999999984   47899999999998 999876

>d2aw0a_ d.58.17.1 (A:) Menkes copper-transporting ATPase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Menkes copper-transporting ATPase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.46  E-value=1.2e-13  Score=101.41  Aligned_cols=64  Identities=22%  Similarity=0.391  Sum_probs=59.4

Q ss_pred             ceEEEEEE-eecchhhHHHHHHHhhccCCcceeEEecCCCEEEEEe---cCCHHHHHHHHHhh-cCeeE
Q 022356          213 NQVVVLRV-SLHCKGCEGKVRKHLSRMKGVSSFNIDFAAKKVTVVG---DVTPLSVLASISKV-KNAQF  276 (298)
Q Consensus       213 mqtVvLkV-gM~C~gCa~KIeKAL~kIeGVesV~VDl~skkVtV~G---~vdp~eLlkaL~Kl-K~Ael  276 (298)
                      .++++|+| ||+|++|+.+|+++|.+++||.+|.||+.+++|+|..   .+++++|.++|+++ |.|.+
T Consensus         2 t~~~~l~V~GM~C~~C~~~Ie~~l~~~~GV~~v~v~~~~~~v~v~~d~~~~~~~~i~~~i~~~Gy~a~l   70 (72)
T d2aw0a_           2 TQETVINIDGMTCNSCVQSIEGVISKKPGVKSIRVSLANSNGTVEYDPLLTSPETLRGAIEDMGFDATL   70 (72)
T ss_dssp             CEEEEEEEECCCSHHHHHHHHHHHHTSTTCCCEEEETTTTEEEEEECTTTCCHHHHHHHHHHHTSEEEE
T ss_pred             cEEEEEEECCcccHHHHHHHHHHHhcCCCcEEEEEECCCCEEEEEECCCCCCHHHHHHHHHhhCCCcEe
Confidence            47889999 9999999999999999999999999999999999984   47899999999998 98865

>d2qifa1 d.58.17.1 (A:1-69) Copper chaperone {Bacillus subtilis, CopZ [TaxId: 1423]}

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Copper chaperone
species: Bacillus subtilis, CopZ [TaxId: 1423]

Probab=99.45  E-value=1.3e-13  Score=100.70  Aligned_cols=62  Identities=23%  Similarity=0.392  Sum_probs=57.7

Q ss_pred             ceEEEEEE-eecchhhHHHHHHHhhccCCcceeEEecCCCEEEEEe---cCCHHHHHHHHHhh-cCe
Q 022356          213 NQVVVLRV-SLHCKGCEGKVRKHLSRMKGVSSFNIDFAAKKVTVVG---DVTPLSVLASISKV-KNA  274 (298)
Q Consensus       213 mqtVvLkV-gM~C~gCa~KIeKAL~kIeGVesV~VDl~skkVtV~G---~vdp~eLlkaL~Kl-K~A  274 (298)
                      |++++|+| ||+|++|+.+|+++|++++||.+|.||+.+++|+|+.   .++.++|.++|+++ |.+
T Consensus         1 M~~~tl~V~Gm~C~~C~~~Ie~~l~~~~GV~~v~v~~~~~~v~v~~d~~~~~~~~i~~~i~~~Gy~~   67 (69)
T d2qifa1           1 MEQKTLQVEGMSCQHCVKAVETSVGELDGVSAVHVNLEAGKVDVSFDADKVSVKDIADAIEDQGYDV   67 (69)
T ss_dssp             CEEEEEEEECCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEECTTTCCHHHHHHHHHHTTCEE
T ss_pred             CcEEEEEECCccCHHHHHHHHHHHhcCCCceEEEEECCCCEEEEEECCCCCCHHHHHHHHHHhCCcc
Confidence            67889999 9999999999999999999999999999999999995   37899999999987 764

>d1cpza_ d.58.17.1 (A:) Copper chaperone {Enterococcus hirae [TaxId: 1354]}

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Copper chaperone
species: Enterococcus hirae [TaxId: 1354]

Probab=99.43  E-value=1.8e-13  Score=99.82  Aligned_cols=61  Identities=18%  Similarity=0.421  Sum_probs=56.9

Q ss_pred             EEEE-eecchhhHHHHHHHhhccCCcceeEEecCCCEEEEEe---cCCHHHHHHHHHhh-cCeeEC
Q 022356          217 VLRV-SLHCKGCEGKVRKHLSRMKGVSSFNIDFAAKKVTVVG---DVTPLSVLASISKV-KNAQFW  277 (298)
Q Consensus       217 vLkV-gM~C~gCa~KIeKAL~kIeGVesV~VDl~skkVtV~G---~vdp~eLlkaL~Kl-K~Aelw  277 (298)
                      .|+| ||+|++|+.+|+++|.+++||.+|.||+.+++|+|+.   .+++++|.++|+++ |.|+++
T Consensus         3 el~V~GM~C~~C~~~Ie~~l~~~~GV~~v~V~~~~~~v~v~~d~~~~~~~~i~~~i~~~Gy~a~vi   68 (68)
T d1cpza_           3 EFSVKGMSCNHCVARIEEAVGRISGVKKVKVQLKKEKAVVKFDEANVQATEICQAINELGYQAEVI   68 (68)
T ss_dssp             EEEESCCCSSSHHHHHHHHHHTSTTEEEEEEETTTTEEEEEECTTTCCHHHHHHHHHTTSSCEEEC
T ss_pred             EEEECCeEcHHHHHHHHHHHhcCCCcEEEEEECCCCEEEEEECCCCCCHHHHHHHHHhhCCCcEEC
Confidence            6899 9999999999999999999999999999999999984   47999999999998 998874

>d1p6ta2 d.58.17.1 (A:73-151) Potential copper-translocating P-type ATPase CopA (YvgX) {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Potential copper-translocating P-type ATPase CopA (YvgX)
species: Bacillus subtilis [TaxId: 1423]

Probab=99.41  E-value=3.6e-13  Score=100.78  Aligned_cols=71  Identities=17%  Similarity=0.394  Sum_probs=64.0

Q ss_pred             eEEEEEE-eecchhhHHHHHHHhhccCCcceeEEecCCCEEEEEe---cCCHHHHHHHHHhh-cCeeECCCCccCC
Q 022356          214 QVVVLRV-SLHCKGCEGKVRKHLSRMKGVSSFNIDFAAKKVTVVG---DVTPLSVLASISKV-KNAQFWPAAAAAT  284 (298)
Q Consensus       214 qtVvLkV-gM~C~gCa~KIeKAL~kIeGVesV~VDl~skkVtV~G---~vdp~eLlkaL~Kl-K~Aelwp~~~~~~  284 (298)
                      ++++|.| ||+|++|+.+|+++|..++||.+|.||+.+++|+|+.   .++.++|.++|+++ |.+.++.......
T Consensus         2 ~k~~~~V~Gm~C~~C~~~Ie~~l~~~~gV~~v~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~~~~~~~e   77 (79)
T d1p6ta2           2 EKAEFDIEGMTCAACANRIEKRLNKIEGVANAPVNFALETVTVEYNPKEASVSDLKEAVDKLGYKLKLKGEQDSIE   77 (79)
T ss_dssp             EEEEEEESSCCSSSHHHHHHHHHTTSSSEEECCEETTTTEEEEEECTTTCCHHHHHHHHHHHTCCEEESCSSSSCC
T ss_pred             eEEEEEECCcccHHHHHHHHHHHhcCCCcEEEEEEeCCCEEEEEECCCCCCHHHHHHHHHHHCCceEECCcccccc
Confidence            5789999 9999999999999999999999999999999999985   47899999999998 9999987655444

>d1q8la_ d.58.17.1 (A:) Menkes copper-transporting ATPase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Menkes copper-transporting ATPase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.39  E-value=3.8e-13  Score=102.11  Aligned_cols=72  Identities=14%  Similarity=0.324  Sum_probs=64.6

Q ss_pred             CCCCceEEEEEE-eecchhhHHHHHHHhhccCCcceeEEecCCCEEEEEe---cCCHHHHHHHHHhh-cCeeECCCC
Q 022356          209 KPPSNQVVVLRV-SLHCKGCEGKVRKHLSRMKGVSSFNIDFAAKKVTVVG---DVTPLSVLASISKV-KNAQFWPAA  280 (298)
Q Consensus       209 ~~~~mqtVvLkV-gM~C~gCa~KIeKAL~kIeGVesV~VDl~skkVtV~G---~vdp~eLlkaL~Kl-K~Aelwp~~  280 (298)
                      +......+.|+| ||+|++|+.+|+++|.+++||.+|.||+.+++|+|..   .++.+.|.++|+++ |.|.+..++
T Consensus         4 ~~~~~~~v~l~V~GMtC~~C~~~Ie~~l~~~~GV~~v~vn~~~~~v~v~~~~~~~~~~~i~~~I~~~Gy~a~~~~~~   80 (84)
T d1q8la_           4 AQAGEVVLKMKVEGMTCHSCTSTIEGKIGKLQGVQRIKVSLDNQEATIVYQPHLISVEEMKKQIEAMGFPAFVKKQP   80 (84)
T ss_dssp             SSSSCEEEEEEECCTTTCSSCHHHHHHHHTCTTEEEEEECSTTTEEEEEECTTTCCHHHHHHHHHHTTCCEECSCCT
T ss_pred             CCCCCEEEEEEECCeEcHHHHHHHHHHHhcCCCceEEEEECCCCEEceeecccccCHHHHHHHHHHhCCccEEcCCc
Confidence            456678899999 9999999999999999999999999999999999984   47899999999998 998876443

>d1kvja_ d.58.17.1 (A:) Menkes copper-transporting ATPase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Menkes copper-transporting ATPase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.39  E-value=7.4e-13  Score=99.04  Aligned_cols=67  Identities=18%  Similarity=0.391  Sum_probs=62.4

Q ss_pred             CCceEEEEEE-eecchhhHHHHHHHhhccCCcceeEEecCCCEEEEEe---cCCHHHHHHHHHhh-cCeeEC
Q 022356          211 PSNQVVVLRV-SLHCKGCEGKVRKHLSRMKGVSSFNIDFAAKKVTVVG---DVTPLSVLASISKV-KNAQFW  277 (298)
Q Consensus       211 ~~mqtVvLkV-gM~C~gCa~KIeKAL~kIeGVesV~VDl~skkVtV~G---~vdp~eLlkaL~Kl-K~Aelw  277 (298)
                      ..+.+++|.| ||+|++|+.+|+++|.+++||.++.||+.+++|+|+.   .++..+|.++|+++ |.|.+.
T Consensus         5 ~~~~~~~l~V~gm~C~~C~~~ie~~l~~~~gv~~v~v~~~~~~v~v~~d~~~~~~~~i~~~i~~~GY~~~~~   76 (79)
T d1kvja_           5 MGVNSVTISVEGMTCNSCVWTIEQQIGKVNGVHHIKVSLEEKNATIIYDPKLQTPKTLQEAIDDMGFDAVIH   76 (79)
T ss_dssp             TTCEEEEEEEESCCSTHHHHHHHHHHHTTTTCSEEEEETTTTEEEEEECTTTCCHHHHHHHHHHHTCEEEEC
T ss_pred             CCceEEEEEECCeecHHHHHHHHHHHhcCCCceEEEEECCCCEEEEEECCCCCCHHHHHHHHHhcCCCcEeC
Confidence            4588999999 9999999999999999999999999999999999984   38999999999998 998875

>d1p6ta1 d.58.17.1 (A:1-72) Potential copper-translocating P-type ATPase CopA (YvgX) {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Potential copper-translocating P-type ATPase CopA (YvgX)
species: Bacillus subtilis [TaxId: 1423]

Probab=99.36  E-value=7e-13  Score=97.26  Aligned_cols=63  Identities=24%  Similarity=0.538  Sum_probs=57.7

Q ss_pred             CceEEEEEE-eecchhhHHHHHHHhhccCCcceeEEecCCCEEEEEe---cCCHHHHHHHHHhh-cCe
Q 022356          212 SNQVVVLRV-SLHCKGCEGKVRKHLSRMKGVSSFNIDFAAKKVTVVG---DVTPLSVLASISKV-KNA  274 (298)
Q Consensus       212 ~mqtVvLkV-gM~C~gCa~KIeKAL~kIeGVesV~VDl~skkVtV~G---~vdp~eLlkaL~Kl-K~A  274 (298)
                      ..++++|+| ||+|++|+.+|+++|.+++||.+|.||+.+++++|+.   .++.++|.++|+++ |.+
T Consensus         4 ~~~~~~l~V~Gm~C~~C~~~Ie~~l~~~~gV~~v~v~~~~~~~~v~~d~~~~~~~~i~~~i~~~Gy~v   71 (72)
T d1p6ta1           4 EQKEIAMQVSGMTCAACAARIEKGLKRMPGVTDANVNLATETVNVIYDPAETGTAAIQEKIEKLGYHV   71 (72)
T ss_dssp             CCEEEEEEEESCCSSHHHHHHHHHHTTSSSEEEEEEEGGGTEEEEEECTTTSCHHHHHHHHHHHTCEE
T ss_pred             CceEEEEEECCeecHHHHHHHHHHHHcCCCcEEEEEEcCCCEEEEEECCCCCCHHHHHHHHHHhCCcc
Confidence            457899999 9999999999999999999999999999999999974   57899999999987 754

>d1mwza_ d.58.17.1 (A:) Metal ion-transporting ATPase ZntA, N-terminal domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Metal ion-transporting ATPase ZntA, N-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=99.35  E-value=9.5e-13  Score=97.09  Aligned_cols=63  Identities=22%  Similarity=0.401  Sum_probs=56.8

Q ss_pred             ceEEEEEE-eecchhhHHHHHHHhhccCCcceeEEecCCCEEEEEec-CCHHHHHHHHHhh-cCee
Q 022356          213 NQVVVLRV-SLHCKGCEGKVRKHLSRMKGVSSFNIDFAAKKVTVVGD-VTPLSVLASISKV-KNAQ  275 (298)
Q Consensus       213 mqtVvLkV-gM~C~gCa~KIeKAL~kIeGVesV~VDl~skkVtV~G~-vdp~eLlkaL~Kl-K~Ae  275 (298)
                      .++++|+| ||+|++|+.+|+++|.+++||.+|.||+.+++|+|.++ ...++|.++|.++ |.++
T Consensus         2 g~k~~~~V~Gm~C~~C~~~Ie~~l~~~~gV~~v~v~~~~~~~~v~~~~~~~~~i~~~i~~~GY~v~   67 (73)
T d1mwza_           2 GTRYSWKVSGMDCAACARKVENAVRQLAGVNQVQVLFATEKLVVDADNDIRAQVESALQKAGYSLR   67 (73)
T ss_dssp             CCCEEEECTTCCSHHHHHHHHHHHHTSSSEEEEEEETTTTEEEEEESSCCHHHHHHHHHHHTCCCC
T ss_pred             CCEEEEEECCcCCHHHHHHHHHHHhcCCCceEEEEECCCCEEEEEECCCCHHHHHHHHHHcCCccc
Confidence            35689999 99999999999999999999999999999999999975 4578999999997 8654