Citrus Sinensis ID: 022360

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------30
Protein Sequence
MEYEGRYRMAAAKYDCLLFDLDDTLYPYSSGIAAACGQNIKDYMVEKLGIERSKIEDLGNLLYKNYGTTMAGLRAIGYDFDYDDYHSFVHGRLPYENLKPDPVLRSLLLSLPLRKIIFTNADKVHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSDDEDDIAFVESAASTTTSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTVLIGKSQRVKGADYAFESIHNIKEAIPELWESDMKSEVGYPGQVAVETSVTA
Secondary Structure (PSIPRED)
cccccccccccccccEEEEEcccccccccccHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHcccccccccccHHHHHHHHcccccEEEEEcccHHHHHHHHHHcccccccccEEEEccccccccccccccHHHHHHHHHHccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHccccccEEEEcccHHcHHHHHHcccEEEEEcccccccccccccccHHHHHHHHHHHHHccccccccccccccEEccccc
Secondary Structure Prediction (SSPRO)
ccccHHHHcccccccEEEEEcccccccccccHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHcHHHHHHHHHcccccHHHHHHHHHcccccHcccccHHHHHHHHHccccEEEEEcccHHHHHHHHHHcccHHHccEEEEEEccccccccccccccccccccccccccccccccccEEEEEEccccccccccccccccccccccHHHHHHHHHHccccHccEEEEcccHHHcHHHHHcccEEEEEEcccccccccHHHHcHccHHHHHHHHHHHccccHcccccccEEEEEEEc
Coil and Loop (DISEMBL)
MEYEGRYRMAAAKYDCLLfdlddtlypyssgiaAACGQNIKDYMVEKLGIERSKIEDLGNLLYKNYGTTMAGLRaigydfdyddyhsfvhgrlpyenlkpdpvLRSLLLSLPLRKIIFTNADKVHAVKVLSrlgledcfegiicfetlnpthkntvsddeddIAFVESAAstttsangpqiFDIIghfaqpnpslvalpktpiackpSELAIEKALKIAsinpqrtlffEDSVRNIQAGKRVGLDTVligksqrvkgadyAFESIHNIKEAIPELwesdmksevgypgqVAVETSVTA
Flexible Loop (DISEMBL)
MEYEGRYRMAAAKYDCLLFDLDDTLYPYSSGIAAACGQNIKDYMVEKLGIERSKIEDLGNLLYKNYGTTMAGLRAIGYDFDYDDYHSFVHGRLPYENLKPDPVLRSLLLSLPLRKIIFTNADKVHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSDDEDDIAFVESAASTTTSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIqagkrvgldtvligksqrvkgadyafeSIHNIKEAIPELWESDMKSEVGYPGQVAVETSVTA
Low Complexity Region (SEG)
MEYEGRYRMAAAKYDCLLFDLDDTLYPYSSGIAAACGQNIKDYMVEKLGIERSKIEDLGNLLYKNYGTTMAGLRAIGYDFDYDDYHSFVHGRLPYENLKPDPVlrslllslplrKIIFTNADKVHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSDDEDDIAFVESAASTTTSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTVLIGKSQRVKGADYAFESIHNIKEAIPELWESDMKSEVGYPGQVAVETSVTA
Disordered region (IsUnstruct)
******YRMAAAKYDCLLFDLDDTLYPYSSGIAAACGQNIKDYMVEKLGIERSKIEDLGNLLYKNYGTTMAGLRAIGYDFDYDDYHSFVHGRLPYENLKPDPVLRSLLLSLPLRKIIFTNADKVHAVKVLSRLGLEDCFEGIICFETLNPTH**********IAFV***********GPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTVLIGKSQRVKGADYAFESIHNIKEAIPELWE*********************
Disordered Region (DISOPRED)
***************CLLFDLDDTLYPYSSGIAAACGQNIKDYMVEKLGIERSKIEDLGNLLYKNYGTTMAGLRAIGYDFDYDDYHSFVHGRLPYENLKPDPVLRSLLLSLPLRKIIFTNADKVHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSDDEDDIAFVESAASTTTSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTVLIGKSQRVKGADYAFESIHNIKEAIPELWES*************VE*SVT*
Disordered Region (DISEMBL)
MEYEGRYRMAAAKYDCLLFDLDDTLYPYSSGIAAACGQNIKDYMVEKLGIERSKIEDLGNLLYKNYGTTMAGLRAIGYDFDYDDYHSFVHGRLPYENLKPDPVLRSLLLSLPLRKIIFTNADKVHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSDDEDDIAFVESAASTTTSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTVLIGKSQRVKGADYAFESIHNIKEAIPELWESDMKSEVGYPGQVAVETSVTA
Disordered Region (DISPRO)
**YEGRYRMAAAKYDCLLFDLDDTLYPYSSGIAAACGQNIKDYMVEKLGIERSKIEDLGNLLYKNYGTTMAGLRAIGYDFDYDDYHSFVHGRLPYENLKPDPVLRSLLLSLPLRKIIFTNADKVHAVKVLSRLGLEDCFEGIICFETLNPTHK***********************NGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTVLIGKSQRVKGADYAFESIHNIKEAIPELWESDMKSEVGYPGQVAVETSVTA
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MEYEGRYRMAAAKYDCLLFDLDDTLYPYSSGIAAACGQNIKDYMVEKLGIERSKIEDLGNLLYKNYGTTMAGLRAIGYDFDYDDYHSFVHGRLPYENLKPDPVLRSLLLSLPLRKIIFTNADKVHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSDDEDDIAFVESAASTTTSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTVLIGKSQRVKGADYAFESIHNIKEAIPELWESDMKSEVGYPGQVAVETSVTA
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	298	2.2.26 [Sep-21-2011]
Q09893	226	Uncharacterized protein C	yes	no	0.419	0.553	0.418	2e-16
P53078	280	Suppressor of disruption	yes	no	0.607	0.646	0.259	7e-11
P40025	321	Phosphate metabolism prot	no	no	0.426	0.395	0.325	5e-09

>sp|Q09893|YAI5_SCHPO Uncharacterized protein C24B11.05 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC24B11.05 PE=3 SV=1

 Score = 86.7 bits (213), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 54/129 (41%), Positives = 72/129 (55%), Gaps = 4/129 (3%)

Query: 17  LLFDLDDTLYPYSSGIAAACGQNIKDYMVEKLGIERSKIEDLGNLLYKNYGTTMAGLRAI 76
           + FDLD+ LYP S  I       I  +  +KLGI   + E L  + Y++YG  + GL  +
Sbjct: 8   IFFDLDNCLYPKSYKIHNMMAARITAFFSDKLGIPTEEAERLREVYYRHYGIAIRGL-VL 66

Query: 77  GYDFDYDDYHSFVHGRLPYEN-LKPDPVLRSLLLSL--PLRKIIFTNADKVHAVKVLSRL 133
            ++ D  DY   V   LP E  +K D VLR +LL L    +  IFTNA  VHA +VL  L
Sbjct: 67  HHEIDAVDYDQRVDQSLPLEKVIKKDEVLREMLLELRKKYKCWIFTNAYIVHANRVLKYL 126

Query: 134 GLEDCFEGI 142
           G+EDCF+GI
Sbjct: 127 GIEDCFDGI 135

Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812)

>sp|P53078|SDT1_YEAST Suppressor of disruption of TFIIS OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=SDT1 PE=1 SV=1

 Score = 68.2 bits (165), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 62/239 (25%), Positives = 102/239 (42%), Gaps = 58/239 (24%)

Query: 17  LLFDLDDTLYPYSSGIAAACGQNIKDYMVEKLGIERSKIEDLGNLLYKNYGTTMAGLRAI 76
             FD+D+ LY  S+ I     Q+I  +    L +       L N  YK YG  + GL  +
Sbjct: 58  FFFDIDNCLYKSSTRIHDLMQQSILRFFQTHLKLSPEDAHVLNNSYYKEYGLAIRGL-VM 116

Query: 77  GYDFDYDDYHSFVHGRLPYEN-LKPDPVLRSLLLSL----PLRKI-IFTNADKVHAVKVL 130
            +  +  +Y+  V   LP ++ LKPD  LR++LL L     + K+ +FTNA K HA++ L
Sbjct: 117 FHKVNALEYNRLVDDSLPLQDILKPDIPLRNMLLRLRQSGKIDKLWLFTNAYKNHAIRCL 176

Query: 131 SRLGLEDCFEGIICFETLNPTHKNTVSDDEDDIAFVESAASTTTSANGPQIFDIIGHFAQ 190
             LG+ D F+G                     + + + + + T                 
Sbjct: 177 RLLGIADLFDG---------------------LTYCDYSRTDT----------------- 198

Query: 191 PNPSLVALPKTPIACKPSELAIEKALKIASI-NPQRTLFFEDSVRNIQAGKRVGLDTVL 248
                       + CKP   A EKA+K + +   +   F +DS +NI+ G ++G+ T +
Sbjct: 199 ------------LVCKPHVKAFEKAMKESGLARYENAYFIDDSGKNIETGIKLGMKTCI 245

Could be an enzyme that inactivates 6-azauracil by modifying it.

Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292)

>sp|P40025|PHM8_YEAST Phosphate metabolism protein 8 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=PHM8 PE=1 SV=1

 Score = 62.0 bits (149), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 44/135 (32%), Positives = 74/135 (54%), Gaps = 8/135 (5%)

Query: 16  CLLFDLDDTLYPYSSGIAAACGQNIKDYMVEKLGIERSKIEDLGNLLYKNYGTTMAGLRA 75
              FD+D+TLY  S+ +     Q++ ++   +LG +  + E L    Y+ YG ++ GL  
Sbjct: 54  VFFFDIDNTLYRKSTKVQLLMQQSLSNFFKYELGFDDDEAERLIESYYQEYGLSVKGLIK 113

Query: 76  IGYDFDYDDYHSFVHGRLPYEN-LKPDPVLRSLLLSLPLRKI-------IFTNADKVHAV 127
                D   Y++F+   LP ++ LKPD  LR LL++L  +K+       +FTN+ K HA+
Sbjct: 114 NKQIDDVLQYNTFIDDSLPLQDYLKPDWKLRELLINLKKKKLGKFDKLWLFTNSYKNHAI 173

Query: 128 KVLSRLGLEDCFEGI 142
           + +  LG+ D F+GI
Sbjct: 174 RCVKILGIADLFDGI 188

May be involved in phosphate metabolism.

Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	298
388496766	301	unknown [Medicago truncatula]	0.996	0.986	0.814	1e-142
224090711	305	predicted protein [Populus trichocarpa]	0.996	0.973	0.797	1e-139
359807365	297	uncharacterized protein LOC100795391 [Gl	0.976	0.979	0.800	1e-137
363807064	302	uncharacterized protein LOC100796466 [Gl	0.996	0.983	0.785	1e-136
255638399	297	unknown [Glycine max]	0.976	0.979	0.790	1e-135
225440392	301	PREDICTED: uncharacterized protein LOC10	0.996	0.986	0.788	1e-134
356567951	297	PREDICTED: uncharacterized protein LOC10	0.976	0.979	0.780	1e-134
358249048	303	uncharacterized protein LOC100787007 [Gl	0.996	0.980	0.782	1e-134
449518966	289	PREDICTED: uncharacterized protein C24B1	0.966	0.996	0.769	1e-130
255647462	308	unknown [Glycine max]	0.976	0.944	0.763	1e-130

>gi|388496766|gb|AFK36449.1| unknown [Medicago truncatula]

 Score =  509 bits (1312), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 246/302 (81%), Positives = 271/302 (89%), Gaps = 5/302 (1%)

Query: 1   MEYEGRYRMAA-AKYDCLLFDLDDTLYPYSSGIAAACGQNIKDYMVEKLGIERSKIEDLG 59
           MEYEGR+R A   KYDCLLFDLDDTLYP S GIA ACGQNIKDYMVEKLGI+RS I+DL 
Sbjct: 1   MEYEGRFRQAQRQKYDCLLFDLDDTLYPLSCGIAKACGQNIKDYMVEKLGIDRSIIDDLS 60

Query: 60  NLLYKNYGTTMAGLRAIGYDFDYDDYHSFVHGRLPYENLKPDPVLRSLLLSLPLRKIIFT 119
           N LYKNYGTTMAGLRAIGYDFDYD+YHSFVHGRLPYENLKPDP+LR+LLLSLP RK+IFT
Sbjct: 61  NHLYKNYGTTMAGLRAIGYDFDYDEYHSFVHGRLPYENLKPDPILRNLLLSLPYRKLIFT 120

Query: 120 NADKVHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSDDEDDIAFVESAA---STTTSA 176
           NADKVHA+K LSRLGLEDCFEG+ICFETLNP HKN+VSDDEDDI FV S+    +T TSA
Sbjct: 121 NADKVHAIKALSRLGLEDCFEGVICFETLNPIHKNSVSDDEDDIEFVGSSIANHTTNTSA 180

Query: 177 NGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNI 236
           +  QIFDIIGHFAQ NPS V LPKTPI CKPSE AIE ALKIA+++PQRTLFFEDS RNI
Sbjct: 181 SNFQIFDIIGHFAQSNPSQV-LPKTPIICKPSEYAIELALKIANLDPQRTLFFEDSARNI 239

Query: 237 QAGKRVGLDTVLIGKSQRVKGADYAFESIHNIKEAIPELWESDMKSEVGYPGQVAVETSV 296
           QAGKRVGLDTVL+GKSQR+KGADYA ESIHN++EA+PELWES++KSEVGYP ++AVETSV
Sbjct: 240 QAGKRVGLDTVLVGKSQRIKGADYALESIHNLREAVPELWESELKSEVGYPNKLAVETSV 299

Query: 297 TA 298
           TA
Sbjct: 300 TA 301

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224090711|ref|XP_002309065.1| predicted protein [Populus trichocarpa] gi|118486538|gb|ABK95108.1| unknown [Populus trichocarpa] gi|222855041|gb|EEE92588.1| predicted protein [Populus trichocarpa]

 Score =  499 bits (1286), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 244/306 (79%), Positives = 270/306 (88%), Gaps = 9/306 (2%)

Query: 1   MEYEGRYRMAAA-KYDCLLFDLDDTLYPYSSGIAAACGQNIKDYMVEKLGIERSKIEDLG 59
           MEY+ RY  A   KY CLLFDLDDTLYP SSGIAAACG+NIKDYMVE+LGIE SK+ +LG
Sbjct: 1   MEYDERYLQAQTPKYSCLLFDLDDTLYPLSSGIAAACGKNIKDYMVERLGIEESKLAELG 60

Query: 60  NLLYKNYGTTMAGLRAIGYDFDYDDYHSFVHGRLPYENLKPDPVLRSLLLSLPLRKIIFT 119
           NLLYKNYGTTMAGLRAIGYDFDYD+YHSFVHGRLPYENLKPDPVLR LLLSLP+RK+IFT
Sbjct: 61  NLLYKNYGTTMAGLRAIGYDFDYDEYHSFVHGRLPYENLKPDPVLRGLLLSLPVRKVIFT 120

Query: 120 NADKVHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSDDEDDIAFVESAAS-------T 172
           NADKVHA KVL +LGLEDCFEGIICFETLNPTHKNTVSDDEDDI FV S  +        
Sbjct: 121 NADKVHARKVLRKLGLEDCFEGIICFETLNPTHKNTVSDDEDDIEFVGSVVTPSTTNGSY 180

Query: 173 TTSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDS 232
           TT+ + P+IFDI+GHFAQPNP+ V LPKTPI CKPSE AIE+ALKIA+INPQRTLFF+DS
Sbjct: 181 TTTTSAPEIFDIVGHFAQPNPNSV-LPKTPIVCKPSEAAIERALKIANINPQRTLFFDDS 239

Query: 233 VRNIQAGKRVGLDTVLIGKSQRVKGADYAFESIHNIKEAIPELWESDMKSEVGYPGQVAV 292
           VRNIQAGKRVGL TVL+G SQRVKGAD+A ESIHNI++A+PELWE+D+KSEVGYPG+V V
Sbjct: 240 VRNIQAGKRVGLQTVLVGYSQRVKGADFALESIHNIRQALPELWETDIKSEVGYPGKVTV 299

Query: 293 ETSVTA 298
           ET VTA
Sbjct: 300 ETPVTA 305

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359807365|ref|NP_001241637.1| uncharacterized protein LOC100795391 [Glycine max] gi|255640503|gb|ACU20537.1| unknown [Glycine max]

 Score =  493 bits (1269), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 237/296 (80%), Positives = 261/296 (88%), Gaps = 5/296 (1%)

Query: 7   YRMAAAKYDCLLFDLDDTLYPYSSGIAAACGQNIKDYMVEKLGIERSKIEDLGNLLYKNY 66
           Y     KYDCLLFDLDDTLYP S+G+A ACGQNIKDYM EKLGIE+SKI+DL NLLYKNY
Sbjct: 3   YMNQRPKYDCLLFDLDDTLYPLSTGLAKACGQNIKDYMAEKLGIEKSKIDDLSNLLYKNY 62

Query: 67  GTTMAGLRAIGYDFDYDDYHSFVHGRLPYENLKPDPVLRSLLLSLPLRKIIFTNADKVHA 126
           GTTMAGLRAIGYDFDYD+YHSFVHGRLPYENLKPDPVLR+LLLSLP R++IFTN+DKVHA
Sbjct: 63  GTTMAGLRAIGYDFDYDEYHSFVHGRLPYENLKPDPVLRNLLLSLPYRRLIFTNSDKVHA 122

Query: 127 VKVLSRLGLEDCFEGIICFETLNPTHKNTVSDDEDDIAFVESAASTTTS----ANGPQIF 182
           VK LSRLGLEDCFEGIICFETLNP HK+TVSDDEDDI FV  + +T  +    A+  QIF
Sbjct: 123 VKALSRLGLEDCFEGIICFETLNPIHKSTVSDDEDDIEFVGGSGTTNPTTKKDASSFQIF 182

Query: 183 DIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRV 242
           DIIGHFAQPNP  V LPKTPI CKPSE AIE ALKIA++NPQRTLFFEDSVRN QAGKRV
Sbjct: 183 DIIGHFAQPNPHTV-LPKTPIICKPSENAIELALKIANLNPQRTLFFEDSVRNTQAGKRV 241

Query: 243 GLDTVLIGKSQRVKGADYAFESIHNIKEAIPELWESDMKSEVGYPGQVAVETSVTA 298
           GL TVL+GKSQR+KGADYA ESIHN++EA+PELWE D+KSEV YPG++AVETSVTA
Sbjct: 242 GLHTVLVGKSQRIKGADYALESIHNLREAVPELWEDDIKSEVAYPGKLAVETSVTA 297

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|363807064|ref|NP_001242073.1| uncharacterized protein LOC100796466 [Glycine max] gi|255644940|gb|ACU22970.1| unknown [Glycine max]

 Score =  490 bits (1262), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 238/303 (78%), Positives = 263/303 (86%), Gaps = 6/303 (1%)

Query: 1   MEYEGRYR--MAAAKYDCLLFDLDDTLYPYSSGIAAACGQNIKDYMVEKLGIERSKIEDL 58
           ME+E R+R  +   KYDCLLFDLDDTLYP  SG+A +C QNIK YMVEKLGI+ SKI+DL
Sbjct: 1   MEFEDRFRHQVQRPKYDCLLFDLDDTLYPLKSGLAKSCLQNIKHYMVEKLGIDPSKIDDL 60

Query: 59  GNLLYKNYGTTMAGLRAIGYDFDYDDYHSFVHGRLPYENLKPDPVLRSLLLSLPLRKIIF 118
            NLLYKNYGTTMAGLRAIGYDFDYD+YHSFVHGRLPYENLKPDPVLR+LLLSLP RK+IF
Sbjct: 61  SNLLYKNYGTTMAGLRAIGYDFDYDEYHSFVHGRLPYENLKPDPVLRNLLLSLPYRKLIF 120

Query: 119 TNADKVHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSDDEDDIAFVESAASTTTSANG 178
           TNADKVHA K LSRLGLEDCFEGIICFETLNP HK+TVSDDEDDI FV S  +  T+ NG
Sbjct: 121 TNADKVHAAKALSRLGLEDCFEGIICFETLNPIHKSTVSDDEDDIEFVGSRTTNPTTCNG 180

Query: 179 ---PQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRN 235
               QIFDIIGHFAQPNP  V LPKTPI CKPSE AIE A++IA++NPQRTLFFEDS RN
Sbjct: 181 SGTSQIFDIIGHFAQPNPGAV-LPKTPIVCKPSENAIELAIEIANLNPQRTLFFEDSTRN 239

Query: 236 IQAGKRVGLDTVLIGKSQRVKGADYAFESIHNIKEAIPELWESDMKSEVGYPGQVAVETS 295
           IQAGKRVGL TVL+G SQR KGADYA ESIHN++EA+PELWE+D+KSEV YPG++AVETS
Sbjct: 240 IQAGKRVGLHTVLVGTSQRCKGADYALESIHNLREAVPELWEADIKSEVAYPGKLAVETS 299

Query: 296 VTA 298
           VTA
Sbjct: 300 VTA 302

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255638399|gb|ACU19510.1| unknown [Glycine max]

 Score =  486 bits (1252), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 234/296 (79%), Positives = 258/296 (87%), Gaps = 5/296 (1%)

Query: 7   YRMAAAKYDCLLFDLDDTLYPYSSGIAAACGQNIKDYMVEKLGIERSKIEDLGNLLYKNY 66
           Y     KYDCLLFDLDDTLYP S+G+A ACGQNIKDYM EKLGIE+SKI+DL NLLYKNY
Sbjct: 3   YMNQRPKYDCLLFDLDDTLYPLSTGLAKACGQNIKDYMAEKLGIEKSKIDDLSNLLYKNY 62

Query: 67  GTTMAGLRAIGYDFDYDDYHSFVHGRLPYENLKPDPVLRSLLLSLPLRKIIFTNADKVHA 126
           GTTMAGLRAIGYDFDYD+YHSFVHGRLPYENLKPDPVLR+LLLSLP R++IFTN+DKVHA
Sbjct: 63  GTTMAGLRAIGYDFDYDEYHSFVHGRLPYENLKPDPVLRNLLLSLPYRRLIFTNSDKVHA 122

Query: 127 VKVLSRLGLEDCFEGIICFETLNPTHKNTVSDDEDDIAFVESAASTTTS----ANGPQIF 182
           VK LSRLGLEDCFEGIICFETLNP HK+TVSDDEDDI FV  + +T  +    A+  QIF
Sbjct: 123 VKALSRLGLEDCFEGIICFETLNPIHKSTVSDDEDDIEFVGGSGTTNPTTKKDASSFQIF 182

Query: 183 DIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRV 242
           DIIGHFAQPNP  V LPKTPI CKPSE AIE ALKIA++NPQRTLFFEDSVRN QAGKRV
Sbjct: 183 DIIGHFAQPNPHTV-LPKTPIICKPSENAIELALKIANLNPQRTLFFEDSVRNTQAGKRV 241

Query: 243 GLDTVLIGKSQRVKGADYAFESIHNIKEAIPELWESDMKSEVGYPGQVAVETSVTA 298
           G  TVL+GK QR+KGADYA ESIHN++EA+PELWE D+KSEV YPG++AVET VTA
Sbjct: 242 GFHTVLVGKFQRIKGADYALESIHNLREAVPELWEDDIKSEVAYPGKLAVETFVTA 297

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225440392|ref|XP_002267559.1| PREDICTED: uncharacterized protein LOC100232886 [Vitis vinifera] gi|7406669|emb|CAB85628.1| putative ripening-related protein [Vitis vinifera]

 Score =  484 bits (1245), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 238/302 (78%), Positives = 264/302 (87%), Gaps = 5/302 (1%)

Query: 1   MEYEGRYRMAAA-KYDCLLFDLDDTLYPYSSGIAAACGQNIKDYMVEKLGIERSKIEDLG 59
           MEY   Y  A   KYDCLLFDLDDTLYP SSG+A AC  NI+DYMVEKLGIE++KI DLG
Sbjct: 1   MEYGDIYLQAQRNKYDCLLFDLDDTLYPLSSGLAKACRNNIEDYMVEKLGIEKNKIADLG 60

Query: 60  NLLYKNYGTTMAGLRAIGYDFDYDDYHSFVHGRLPYENLKPDPVLRSLLLSLPLRKIIFT 119
           NLLYKNYGTTMAGLRAIGYDFDYD+YHSFVHGRLPYENLKPDPVLRSLLLSLP+RK+IFT
Sbjct: 61  NLLYKNYGTTMAGLRAIGYDFDYDEYHSFVHGRLPYENLKPDPVLRSLLLSLPIRKVIFT 120

Query: 120 NADKVHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSDDEDDIAFVE---SAASTTTSA 176
           NADKVHA K LSRLGLEDCFEG+ICFETLNP+HK+TVSDDEDDIAFV    + A+ TT+ 
Sbjct: 121 NADKVHAAKALSRLGLEDCFEGVICFETLNPSHKSTVSDDEDDIAFVRLTANTATATTTT 180

Query: 177 NGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNI 236
           +  +IFDIIGHF+QPN    ALPKTPI CKPSE AIE+AL+IA+INPQRTLFFEDS RNI
Sbjct: 181 SSTEIFDIIGHFSQPNAG-TALPKTPIVCKPSEAAIERALRIANINPQRTLFFEDSARNI 239

Query: 237 QAGKRVGLDTVLIGKSQRVKGADYAFESIHNIKEAIPELWESDMKSEVGYPGQVAVETSV 296
           Q+GKRVGL TVL+G SQR+KGAD+A ESIHN++EA+PELWE D KSEVGY GQVAVET V
Sbjct: 240 QSGKRVGLHTVLVGTSQRIKGADFALESIHNMREALPELWEGDKKSEVGYAGQVAVETPV 299

Query: 297 TA 298
           TA
Sbjct: 300 TA 301

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356567951|ref|XP_003552178.1| PREDICTED: uncharacterized protein LOC100777400 [Glycine max]

 Score =  483 bits (1244), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 231/296 (78%), Positives = 261/296 (88%), Gaps = 5/296 (1%)

Query: 7   YRMAAAKYDCLLFDLDDTLYPYSSGIAAACGQNIKDYMVEKLGIERSKIEDLGNLLYKNY 66
           Y     KYDCLLFDLDDTLYP S+G+A ACGQNIKDYMVEKLGI++SKI+DL NLLYKNY
Sbjct: 3   YMNQRPKYDCLLFDLDDTLYPLSTGLAKACGQNIKDYMVEKLGIDKSKIDDLSNLLYKNY 62

Query: 67  GTTMAGLRAIGYDFDYDDYHSFVHGRLPYENLKPDPVLRSLLLSLPLRKIIFTNADKVHA 126
           GTTMAGLRAIGYDF+YD+YHS+VHGRLPYENLKPDPVLR+LLLSLP RK+IFTN+DKVHA
Sbjct: 63  GTTMAGLRAIGYDFEYDEYHSYVHGRLPYENLKPDPVLRNLLLSLPYRKLIFTNSDKVHA 122

Query: 127 VKVLSRLGLEDCFEGIICFETLNPTHKNTVSDDEDDIAFVESAASTTTS----ANGPQIF 182
           VK LS+LGLEDCFEGIICFETLNP HK++VSDDEDDI FV  + +T  +     N  QIF
Sbjct: 123 VKALSKLGLEDCFEGIICFETLNPIHKSSVSDDEDDIEFVGGSGTTIPAPKKDVNSFQIF 182

Query: 183 DIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRV 242
           D+I HFA+PNP+ V LPKTPI CKPSE AIE ALKIA++NPQRTLFFEDSVRNIQAGKRV
Sbjct: 183 DLISHFAKPNPNTV-LPKTPIICKPSENAIELALKIANLNPQRTLFFEDSVRNIQAGKRV 241

Query: 243 GLDTVLIGKSQRVKGADYAFESIHNIKEAIPELWESDMKSEVGYPGQVAVETSVTA 298
           GL TVL+GKSQR+KGADYA ESIHN++EA+PELWE D+KSEV YPG+ +VETSVTA
Sbjct: 242 GLHTVLVGKSQRIKGADYALESIHNLREAVPELWEGDIKSEVAYPGKHSVETSVTA 297

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|358249048|ref|NP_001239984.1| uncharacterized protein LOC100787007 [Glycine max] gi|255644526|gb|ACU22766.1| unknown [Glycine max]

 Score =  483 bits (1243), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 238/304 (78%), Positives = 260/304 (85%), Gaps = 7/304 (2%)

Query: 1   MEYEGRYRMAAA--KYDCLLFDLDDTLYPYSSGIAAACGQNIKDYMVEKLGIERSKIEDL 58
           ME+E R+R  A   KYDCLLFDLDDTLYP  SG+A +C QNIKDYMVEKLGI  SKI+DL
Sbjct: 1   MEFEDRFRHQAQRPKYDCLLFDLDDTLYPLKSGLAKSCLQNIKDYMVEKLGIHPSKIDDL 60

Query: 59  GNLLYKNYGTTMAGLRAIGYDFDYDDYHSFVHGRLPYENLKPDPVLRSLLLSLPLRKIIF 118
            NLLYKNYGTTMAGLRAIGYDFDYD+YHSFVHGRLPYENLKPD VLR+LLLSLP RK+IF
Sbjct: 61  SNLLYKNYGTTMAGLRAIGYDFDYDEYHSFVHGRLPYENLKPDQVLRNLLLSLPYRKLIF 120

Query: 119 TNADKVHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSDDEDDIAFVESAAST-TTSAN 177
           TNADKVHA K L+RLGLEDCFEGIICFETLNP HK+ VSDDEDDI FV S  +  TT+ N
Sbjct: 121 TNADKVHAAKALNRLGLEDCFEGIICFETLNPIHKSIVSDDEDDIEFVGSRTTNPTTTCN 180

Query: 178 G---PQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVR 234
           G    QIFDIIGHFAQ NPS V LPKTPI CKPSE AIE AL IA++NPQRTLFFEDS R
Sbjct: 181 GSGTSQIFDIIGHFAQLNPSAV-LPKTPIVCKPSENAIELALNIANLNPQRTLFFEDSTR 239

Query: 235 NIQAGKRVGLDTVLIGKSQRVKGADYAFESIHNIKEAIPELWESDMKSEVGYPGQVAVET 294
           NIQAGKRVGL TVL+G SQR KGADYA ESIHN++EA+PELWE+D+KSE  YPG++AVET
Sbjct: 240 NIQAGKRVGLHTVLVGTSQRCKGADYALESIHNLREAVPELWEADIKSEAAYPGKLAVET 299

Query: 295 SVTA 298
           SVTA
Sbjct: 300 SVTA 303

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449518966|ref|XP_004166506.1| PREDICTED: uncharacterized protein C24B11.05-like [Cucumis sativus]

 Score =  469 bits (1208), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 230/299 (76%), Positives = 256/299 (85%), Gaps = 11/299 (3%)

Query: 1   MEYEGRYRMAA-AKYDCLLFDLDDTLYPYSSGIAAACGQNIKDYMVEKLGIERSKIEDLG 59
           MEYE R+R A   KYDCLLFDLDDTLYP SSGIAA+C QNIKDYMVEKLGIE+SKI DL 
Sbjct: 1   MEYENRFRQAQRPKYDCLLFDLDDTLYPLSSGIAASCLQNIKDYMVEKLGIEQSKIPDLC 60

Query: 60  NLLYKNYGTTMAGLRAIGYDFDYDDYHSFVHGRLPYENLKPDPVLRSLLLSLPLRKIIFT 119
           NLLYKNYGTTMAGLRAIGYDFDYD+YH FVHGRLPY+NLKPDPVLR+LLL+LP RK+IFT
Sbjct: 61  NLLYKNYGTTMAGLRAIGYDFDYDEYHKFVHGRLPYDNLKPDPVLRNLLLNLPYRKVIFT 120

Query: 120 NADKVHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSDDEDDIAFVESAASTTTSANGP 179
           NADK+HAVKVL +LGLEDCF+GIICFETLNPT+KN VS D+D++  + S +         
Sbjct: 121 NADKIHAVKVLKKLGLEDCFQGIICFETLNPTNKNFVSVDKDEMNPIPSDS--------- 171

Query: 180 QIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAG 239
           +IFDIIGHF  PNP    LPKTPI CKPSE AIE+ALKIA +NPQRTLFFEDSVRNIQAG
Sbjct: 172 KIFDIIGHFLHPNPG-TELPKTPIICKPSEAAIERALKIAGLNPQRTLFFEDSVRNIQAG 230

Query: 240 KRVGLDTVLIGKSQRVKGADYAFESIHNIKEAIPELWESDMKSEVGYPGQVAVETSVTA 298
           KRVGLDTVLIG SQRVKGADYA ESIHN++E IPELW  ++KSE+GY G+V VETSVTA
Sbjct: 231 KRVGLDTVLIGTSQRVKGADYALESIHNLREGIPELWNVEIKSEMGYAGKVGVETSVTA 289

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255647462|gb|ACU24195.1| unknown [Glycine max]

 Score =  469 bits (1207), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 226/296 (76%), Positives = 255/296 (86%), Gaps = 5/296 (1%)

Query: 7   YRMAAAKYDCLLFDLDDTLYPYSSGIAAACGQNIKDYMVEKLGIERSKIEDLGNLLYKNY 66
           Y     KYDCLLFDLDDTLYP S+G+A ACGQNIKDYMVEKLGI++SKI+DL NL YKNY
Sbjct: 3   YMNQRPKYDCLLFDLDDTLYPLSTGLAKACGQNIKDYMVEKLGIDKSKIDDLSNLPYKNY 62

Query: 67  GTTMAGLRAIGYDFDYDDYHSFVHGRLPYENLKPDPVLRSLLLSLPLRKIIFTNADKVHA 126
           GTTMAGLRAIGYDF+YD+YHS+VHGRLPYENLKPDPVLR+LLLSLP RK+IFTN+DKVHA
Sbjct: 63  GTTMAGLRAIGYDFEYDEYHSYVHGRLPYENLKPDPVLRNLLLSLPYRKLIFTNSDKVHA 122

Query: 127 VKVLSRLGLEDCFEGIICFETLNPTHKNTVSDDEDDIAFVESAASTTTS----ANGPQIF 182
           VK LS+LGLEDCFEGIICFETLNP HK++VSDDEDDI FV  + +T  +     N  QIF
Sbjct: 123 VKALSKLGLEDCFEGIICFETLNPIHKSSVSDDEDDIEFVGGSGTTIPAPKKDVNSFQIF 182

Query: 183 DIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRV 242
           D+I HFA+PNP+ V LPKTPI CKPSE AIE ALKIA++NPQRTLFFE SVRNIQAGKRV
Sbjct: 183 DLISHFAKPNPNTV-LPKTPIICKPSENAIELALKIANLNPQRTLFFEGSVRNIQAGKRV 241

Query: 243 GLDTVLIGKSQRVKGADYAFESIHNIKEAIPELWESDMKSEVGYPGQVAVETSVTA 298
           G  TVL+GK QR+KGADYA ESIHN++EA+P LWE D+KSEV YPG+  VETSVTA
Sbjct: 242 GFHTVLVGKFQRIKGADYALESIHNLREAVPVLWEGDIKSEVAYPGKHFVETSVTA 297

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	298
TAIR|locus:2185223	280	AT5G02230 [Arabidopsis thalian	0.540	0.575	0.691	5.1e-106
TAIR|locus:2148358	266	AT5G59490 [Arabidopsis thalian	0.463	0.518	0.623	4.1e-79
TAIR|locus:2079522	249	AT3G62040 [Arabidopsis thalian	0.483	0.578	0.613	2e-71
TAIR|locus:2045422	263	AT2G32150 [Arabidopsis thalian	0.489	0.555	0.557	7.8e-60
TAIR|locus:2148343	282	AT5G59480 [Arabidopsis thalian	0.600	0.634	0.545	7.8e-54
DICTYBASE|DDB_G0293862	249	DDB_G0293862 "haloacid dehalog	0.426	0.510	0.374	1.4e-27
TIGR_CMR|SPO_1374	214	SPO_1374 "pyrimidine 5'-nucleo	0.412	0.574	0.304	2.8e-16
POMBASE|SPAC24B11.05	226	SPAC24B11.05 "pyrimidine 5'-nu	0.419	0.553	0.387	1.5e-14
SGD|S000003192	280	SDT1 "Pyrimidine nucleotidase"	0.412	0.439	0.323	1.6e-12
UNIPROTKB|G4MVR5	238	MGG_01783 "Uncharacterized pro	0.634	0.794	0.295	1.3e-09

TAIR|locus:2185223 AT5G02230 [Arabidopsis thaliana (taxid:3702)]

 Score = 605 (218.0 bits), Expect = 5.1e-106, Sum P(2) = 5.1e-106
 Identities = 112/162 (69%), Positives = 128/162 (79%)

Query:     1 MEYEGRYRMAAA-KYDCLLFDLDDTLYPYSSGIAAACGQNIKDYMVEKLGIERSKIEDLG 59
             ME+E RY +A + KYDCLLFDLDDTLYP SSGIA  CG NIKDYM EKLGI + KI +L 
Sbjct:     1 MEFENRYGLATSQKYDCLLFDLDDTLYPLSSGIARECGNNIKDYMTEKLGIPKDKIVELS 60

Query:    60 NLLYKNYGTTMAGLRAIGYDFDYDDYHSFVHGRLPYENLKPDPVXXXXXXXXXXXKIIFT 119
             +LLYKNYGTTMAGLRAIGY+FDYD+YHSFVHGRLPY+N+KPD V           K+IFT
Sbjct:    61 DLLYKNYGTTMAGLRAIGYEFDYDEYHSFVHGRLPYDNIKPDLVLRSLLLSLPLRKVIFT 120

Query:   120 NADKVHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSDDED 161
             NAD+VHA K L +LGLEDCFEGIICFETLN  H N  S++ +
Sbjct:   121 NADRVHAAKALKKLGLEDCFEGIICFETLNLMHTNAASNNSE 162

GO:0003824 "catalytic activity" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0016787 "hydrolase activity" evidence=IEA;ISS

TAIR|locus:2148358 AT5G59490 [Arabidopsis thaliana (taxid:3702)]

 Score = 490 (177.5 bits), Expect = 4.1e-79, Sum P(2) = 4.1e-79
 Identities = 86/138 (62%), Positives = 108/138 (78%)

Query:    13 KYDCLLFDLDDTLYPYSSGIAAACGQNIKDYMVEKLGIERSKIEDLGNLLYKNYGTTMAG 72
             +Y+CLLFDLDDTLYP SSG++ AC  NI +YMVEKLGI+   + +L  +LYK YGT+MAG
Sbjct:    10 RYECLLFDLDDTLYPLSSGLSDACSNNIIEYMVEKLGIDEDGVVELNQILYKKYGTSMAG 69

Query:    73 LRAIGYDFDYDDYHSFVHGRLPYENLKPDPVXXXXXXXXXXXKIIFTNADKVHAVKVLSR 132
             L+A+GY+FD D+YH +VHGRLPYENLKPDPV           K++F+N D+VH +K L+R
Sbjct:    70 LKAVGYEFDNDEYHRYVHGRLPYENLKPDPVLRSLLLGLPLRKLVFSNGDEVHVMKALTR 129

Query:   133 LGLEDCFEGIICFETLNP 150
             LG+EDCFE II FETLNP
Sbjct:   130 LGIEDCFERIISFETLNP 147

GO:0005634 "nucleus" evidence=ISM

GO:0016787 "hydrolase activity" evidence=IEA;ISS

TAIR|locus:2079522 AT3G62040 [Arabidopsis thaliana (taxid:3702)]

 Score = 481 (174.4 bits), Expect = 2.0e-71, Sum P(2) = 2.0e-71
 Identities = 89/145 (61%), Positives = 108/145 (74%)

Query:    12 AKYDCLLFDLDDTLYPYSSGIAAACGQNIKDYMVEKLGIERSKIEDLGNLLYKNYGTTMA 71
             A Y+CL FD+DDTLYP S GI  AC  NI+++M+ +LGIE S++  L   LYK YGTTMA
Sbjct:     6 ANYECLFFDMDDTLYPLSIGINLACRNNIQEFMLNQLGIEESEVPKLCLDLYKEYGTTMA 65

Query:    72 GLRAIGYDFDYDDYHSFVHGRLPYENLKPDPVXXXXXXXXXXXKIIFTNADKVHAVKVLS 131
             GL+ +GY+FD D++H +VHGRLPYE LKPDP+           KIIFTNADK HA + L+
Sbjct:    66 GLKVMGYEFDNDEFHEYVHGRLPYEKLKPDPLLRNLLLSMPHRKIIFTNADKAHATRALN 125

Query:   132 RLGLEDCFEGIICFETLNPTH-KNT 155
             RLGLEDCFEGIICFETLNP+   NT
Sbjct:   126 RLGLEDCFEGIICFETLNPSSDSNT 150

GO:0005634 "nucleus" evidence=ISM

GO:0016787 "hydrolase activity" evidence=IEA;ISS

GO:0010167 "response to nitrate" evidence=RCA

GO:0015706 "nitrate transport" evidence=RCA

TAIR|locus:2045422 AT2G32150 [Arabidopsis thaliana (taxid:3702)]

 Score = 423 (154.0 bits), Expect = 7.8e-60, Sum P(2) = 7.8e-60
 Identities = 82/147 (55%), Positives = 103/147 (70%)

Query:    15 DCLLFDLDDTLYPYSSGIAAACGQNIKDYMVEKLGIERSKIEDLGNLLYKNYGTTMAGLR 74
             +CL+FDLDDTLYP  +GIA A  +NI D++VEK G   SK   L   L+K YG+T+AGLR
Sbjct:     7 NCLIFDLDDTLYPLKTGIAPAVKKNIDDFLVEKFGFSESKASSLRVELFKTYGSTLAGLR 66

Query:    75 AIGYDFDYDDYHSFVHGRLPYENLKPDPVXXXXXXXXXXXKIIFTNADKVHAVKVLSRLG 134
             A+G+D   D+YHSFVHGRLPY +++P+             KIIFTN+DK HAVKVL +LG
Sbjct:    67 ALGHDVHPDEYHSFVHGRLPYGSIEPNNKLRNLLNKIKQRKIIFTNSDKNHAVKVLKKLG 126

Query:   135 LEDCFEGIICFETLNPT-HKNTVSDDE 160
             LEDCFE +ICFET+NP    +T   DE
Sbjct:   127 LEDCFEEMICFETMNPNLFGSTTRPDE 153

GO:0003824 "catalytic activity" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0016787 "hydrolase activity" evidence=IEA;ISS

TAIR|locus:2148343 AT5G59480 [Arabidopsis thaliana (taxid:3702)]

 Score = 532 (192.3 bits), Expect = 7.8e-54, Sum P(2) = 7.8e-54
 Identities = 107/196 (54%), Positives = 132/196 (67%)

Query:     1 MEYEGRYRMAA-AKYDCLLFDLDDTLYPYSSGIAAACGQNIKDYMVEKLGIERSKIEDLG 59
             M YE  ++  + AKYDCLLFD+DDTLYP SSG+A    +NI++YMV+KLGIE  K+++L 
Sbjct:     1 MAYEEHFQQTSEAKYDCLLFDIDDTLYPLSSGLAMEVKKNIQEYMVQKLGIEEDKVQELC 60

Query:    60 NLLYKNYGTTMAGLRAIGYDFDYDDYHSFVHGRLPYENLKPDPVXXXXXXXXXXXKIIFT 119
               LYK YGTTMAGL+A+GYDFDYDD+H FVHGRLPY  LKPDP+           K++FT
Sbjct:    61 LSLYKIYGTTMAGLKAVGYDFDYDDFHRFVHGRLPYSTLKPDPILRNIILSLPIRKVVFT 120

Query:   120 NADKVHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSDDEDDIAFVESAASTTTSANGP 179
             NADK HA K+++RLGLE CFE II FETLNP  K             ES   T T     
Sbjct:   121 NADKAHAAKIIARLGLEGCFEKIISFETLNPITKT------------ESPVDTKTR---- 164

Query:   180 QIFDIIGHFAQPNPSL 195
             +IFDII + A P+ S+
Sbjct:   165 EIFDIISYMANPDSSI 180

GO:0005634 "nucleus" evidence=ISM

GO:0016787 "hydrolase activity" evidence=IEA;ISS

GO:0015824 "proline transport" evidence=RCA

DICTYBASE|DDB_G0293862 DDB_G0293862 "haloacid dehalogenase-like hydrolase" [Dictyostelium discoideum (taxid:44689)]

 Score = 212 (79.7 bits), Expect = 1.4e-27, Sum P(2) = 1.4e-27
 Identities = 49/131 (37%), Positives = 70/131 (53%)

Query:    13 KYDCLLFDLDDTLYPYSSGIAAACGQNIKDYMVEKLGIERSKIEDLGNLLYKNYGTTMAG 72
             K   LLFDLD+TLYP S G+AA     I  YM   L +   +++ + N  YK YG T+ G
Sbjct:    20 KIHTLLFDLDNTLYPKSCGLAAQVSNRITQYMSIILNLPMEEVDKVRNHYYKTYGLTLKG 79

Query:    73 LRAIGYDFDYDDYHSFVHGRLPYEN-LKPDPVXXX--XXXXXXXXKIIFTNADKVHAVKV 129
             L  + ++ + D Y  +VHG L  ++ LKPD               K+IF+NAD  H  +V
Sbjct:    80 LM-MNHEVNIDKYLDYVHGGLDLKSHLKPDARLHACLKSVKSGVKKVIFSNADIGHCKRV 138

Query:   130 LSRLGLEDCFE 140
                L ++DCF+
Sbjct:   139 TRELEIDDCFD 149

GO:0016787 "hydrolase activity" evidence=IEA

GO:0005575 "cellular_component" evidence=ND

TIGR_CMR|SPO_1374 SPO_1374 "pyrimidine 5'-nucleotidase" [Ruegeria pomeroyi DSS-3 (taxid:246200)]

 Score = 156 (60.0 bits), Expect = 2.8e-16, Sum P(2) = 2.8e-16
 Identities = 38/125 (30%), Positives = 63/125 (50%)

Query:    18 LFDLDDTLYPYSSGIAAACGQNIKDYMVEKLGIERSKIEDLGNLLYKNYGTTMAGLRAIG 77
             +FDLD+TLYP +  +       +  Y++E LG+ R++ + L    ++ YGTT+AGL    
Sbjct:    13 VFDLDNTLYPPAMRLFDQIEVRMTAYVMEALGVTRAEADRLRAHYWRQYGTTLAGLMR-E 71

Query:    78 YDFDYDDYHSFVHGRLPYENLKPDPVXXXXXXXXXXXKIIFTNADKVHAVKVLSRLGLED 137
             +  D D Y   VH  +   ++ PD             +I++TN    +A +VL+  GL  
Sbjct:    72 HGLDPDPYLVAVH-EVDMSHMTPDTALASHIRALPGRRIVYTNGSAPYAERVLAARGLTG 130

Query:   138 CFEGI 142
              F+ I
Sbjct:   131 LFDAI 135

GO:0006206 "pyrimidine nucleobase metabolic process" evidence=ISS

GO:0008253 "5'-nucleotidase activity" evidence=ISS

POMBASE|SPAC24B11.05 SPAC24B11.05 "pyrimidine 5'-nucleotidase (predicted)" [Schizosaccharomyces pombe (taxid:4896)]

 Score = 186 (70.5 bits), Expect = 1.5e-14, P = 1.5e-14
 Identities = 50/129 (38%), Positives = 66/129 (51%)

Query:    17 LLFDLDDTLYPYSSGIAAACGQNIKDYMVEKLGIERSKIEDLGNLLYKNYGTTMAGLRAI 76
             + FDLD+ LYP S  I       I  +  +KLGI   + E L  + Y++YG  + GL  +
Sbjct:     8 IFFDLDNCLYPKSYKIHNMMAARITAFFSDKLGIPTEEAERLREVYYRHYGIAIRGL-VL 66

Query:    77 GYDFDYDDYHSFVHGRLPYEN-LKPDPVXXXXXXXXXXX-KI-IFTNADKVHAVKVLSRL 133
              ++ D  DY   V   LP E  +K D V            K  IFTNA  VHA +VL  L
Sbjct:    67 HHEIDAVDYDQRVDQSLPLEKVIKKDEVLREMLLELRKKYKCWIFTNAYIVHANRVLKYL 126

Query:   134 GLEDCFEGI 142
             G+EDCF+GI
Sbjct:   127 GIEDCFDGI 135

GO:0005634 "nucleus" evidence=ISO;IDA

GO:0005737 "cytoplasm" evidence=ISO

GO:0005829 "cytosol" evidence=IDA

GO:0006206 "pyrimidine nucleobase metabolic process" evidence=ISO

GO:0008252 "nucleotidase activity" evidence=ISO

GO:0047405 "pyrimidine-5'-nucleotide nucleosidase activity" evidence=NAS

SGD|S000003192 SDT1 "Pyrimidine nucleotidase" [Saccharomyces cerevisiae (taxid:4932)]

 Score = 144 (55.7 bits), Expect = 1.6e-12, Sum P(2) = 1.6e-12
 Identities = 42/130 (32%), Positives = 63/130 (48%)

Query:    19 FDLDDTLYPYSSGIAAACGQNIKDYMVEKLGIERSKIEDLGNLLYKNYGTTMAGLRAIGY 78
             FD+D+ LY  S+ I     Q+I  +    L +       L N  YK YG  + GL  + +
Sbjct:    60 FDIDNCLYKSSTRIHDLMQQSILRFFQTHLKLSPEDAHVLNNSYYKEYGLAIRGL-VMFH 118

Query:    79 DFDYDDYHSFVHGRLPYEN-LKPD-PVXXXXXXXXXXXKI----IFTNADKVHAVKVLSR 132
               +  +Y+  V   LP ++ LKPD P+           KI    +FTNA K HA++ L  
Sbjct:   119 KVNALEYNRLVDDSLPLQDILKPDIPLRNMLLRLRQSGKIDKLWLFTNAYKNHAIRCLRL 178

Query:   133 LGLEDCFEGI 142
             LG+ D F+G+
Sbjct:   179 LGIADLFDGL 188

GO:0016787 "hydrolase activity" evidence=IEA

GO:0008252 "nucleotidase activity" evidence=IDA

GO:0005575 "cellular_component" evidence=ND

GO:0006206 "pyrimidine nucleobase metabolic process" evidence=IMP

UNIPROTKB|G4MVR5 MGG_01783 "Uncharacterized protein" [Magnaporthe oryzae 70-15 (taxid:242507)]

 Score = 156 (60.0 bits), Expect = 1.3e-09, P = 1.3e-09
 Identities = 63/213 (29%), Positives = 92/213 (43%)

Query:    19 FDLDDTLYPYSSGIAAACGQNIKDYMVEKLGIERSKIEDLGNLLYKNYGTTMAGLRAIGY 78
             FD+D+ LYP S+ +       I  Y  E L +   +   L    Y+NYG  + GL    +
Sbjct:    21 FDIDNCLYPKSAKVHDRMADLIDKYFAEHLSLSWDEAVRLHKEYYQNYGLAIEGL-VRHH 79

Query:    79 DFDYDDYHSFVHGRLPYENL-KPDPVXXXXXXXXXXXKI---IFTNADKVHAVKVLSRLG 134
               D  +Y+S V   LP E + KP+P            K+   +FTNA   HA +V+  L 
Sbjct:    80 QIDPLEYNSKVDDALPLEGIIKPNPQLRKMLEDIDRSKVKLWLFTNAYVNHARRVVRLLE 139

Query:   135 LEDCFEGII-CFETLNPT----HK----NTVSD----DEDDIAFVESAASTTTSANGPQI 181
             +ED F+GI  C     P     H+    N + D    + DD  FV+        AN    
Sbjct:   140 IEDLFDGITYCDYAAQPLVCKPHEDAFANAMRDAGVENVDDCYFVDDNYQNCRKAN---- 195

Query:   182 FDIIGHFAQPNPSLVALPKTPIACKPSELAIEK 214
              +I  H A      V +P+TP A K    ++E+
Sbjct:   196 -EIGWHTAHLVEEGVKVPRTP-ASKHQIRSLEE 226

GO:0005575 "cellular_component" evidence=ND

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	3.1.3.68	LOW CONFIDENCE prediction!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: estExt_fgenesh4_pg.C_LG_VI0678 SubName- Full=Putative uncharacterized protein; (305 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	298
TIGR01993	183	TIGR01993, Pyr-5-nucltdase, pyrimidine 5'-nucleoti	3e-72
TIGR01509	177	TIGR01509, HAD-SF-IA-v3, haloacid dehalogenase sup	5e-24
pfam13419	176	pfam13419, HAD_2, Haloacid dehalogenase-like hydro	2e-18
COG1011	229	COG1011, COG1011, Predicted hydrolase (HAD superfa	8e-15
pfam13242	74	pfam13242, Hydrolase_like, HAD-hyrolase-like	1e-07
TIGR02253	221	TIGR02253, CTE7, HAD superfamily (subfamily IA) hy	2e-06
cd01427	139	cd01427, HAD_like, Haloacid dehalogenase-like hydr	3e-06
pfam00702	187	pfam00702, Hydrolase, haloacid dehalogenase-like h	1e-05
COG0546	220	COG0546, Gph, Predicted phosphatases [General func	1e-05
COG0647	269	COG0647, NagD, Predicted sugar phosphatases of the	3e-05
TIGR01549	162	TIGR01549, HAD-SF-IA-v1, haloacid dehalogenase sup	9e-05
COG0637	221	COG0637, COG0637, Predicted phosphatase/phosphohex	0.002

>gnl|CDD|233675 TIGR01993, Pyr-5-nucltdase, pyrimidine 5'-nucleotidase

 Score =  219 bits (561), Expect = 3e-72
 Identities = 98/235 (41%), Positives = 131/235 (55%), Gaps = 52/235 (22%)

Query: 15  DCLLFDLDDTLYPYSSGIAAACGQNIKDYMVEKLGIERSKIEDLGNLLYKNYGTTMAGLR 74
           D   FDLD+TLYP+S+GI     +NI +++  +L +   +   L    YK YGTT+AGL 
Sbjct: 1   DVWFFDLDNTLYPHSAGIFLQIDRNITEFVAARLKLSPEEARVLRKDYYKEYGTTLAGLM 60

Query: 75  AIGYDFDYDDYHSFVHGRLPYENLKPDPVLRSLLLSLPLRKIIFTNADKVHAVKVLSRLG 134
            + ++ D D+Y  +VHGRLPY+ LKPDP LR+LLL LP RKIIFTN D+ HA + L RLG
Sbjct: 61  IL-HEIDADEYLRYVHGRLPYDKLKPDPELRNLLLRLPGRKIIFTNGDRAHARRALRRLG 119

Query: 135 LEDCFEGIICFETLNPTHKNTVSDDEDDIAFVESAASTTTSANGPQIFDIIGHFAQPNPS 194
           +EDCF+GI CF+T N                                           P 
Sbjct: 120 IEDCFDGIFCFDTAN-------------------------------------------PD 136

Query: 195 LVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTVLI 249
           L+         KPS  A EKAL+ A ++P+R +FF+DS RNI AGK +G+ TVL+
Sbjct: 137 LL--------PKPSPQAYEKALREAGVDPERAIFFDDSARNIAAGKALGMKTVLV 183

This family of proteins includes the SDT1/SSM1 gene from yeast which has been shown to code for a pyrimidine (UMP/CMP) 5'nucleotidase. The family spans plants, fungi and a small number of bacteria. These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509). Length = 183

>gnl|CDD|233443 TIGR01509, HAD-SF-IA-v3, haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED

 Score = 95.6 bits (238), Expect = 5e-24
 Identities = 56/238 (23%), Positives = 79/238 (33%), Gaps = 65/238 (27%)

Query: 16  CLLFDLDDTLYPYSSGIAAACGQNIKDYMVEKLGIERSKIEDLGNLLYK-NYGTTMAGLR 74
            +LFDLD  L   +  IA    +     + ++LG+      +L    +K  YG TM+   
Sbjct: 1   AVLFDLDGVLVDTAHAIAKLVDRAEFPLVPDELGVSEVGSLELALRRWKAKYGRTMSAED 60

Query: 75  AIGYDFDYDDYHSFVHGRLPYENLKPDPVLRSLLLSLPLR---KIIFTNADKVHAVKVLS 131
           A            F         LKP P +R+LL +L  R     + TN+ +  A  VL 
Sbjct: 61  AQLL-----YKQLFYEALEKEG-LKPLPGVRALLEALRARGKKLALLTNSPRADAKLVL- 113

Query: 132 RLGLEDCFEGIICFETLNPTHKNTVSDDEDDIAFVESAASTTTSANGPQIFDIIGHFAQP 191
            LGL   F+ +I                                                
Sbjct: 114 ELGLRALFDVVIDSSD-------------------------------------------- 129

Query: 192 NPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTVLI 249
               V L K      P      +ALK   + P   LF +DS   I A K  G+ TVL+
Sbjct: 130 ----VGLGK------PDPDIYLQALKKLGLKPSECLFVDDSPAGIDAAKAAGMHTVLV 177

This model represents part of one structural subfamily of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The superfamily is defined by the presence of three short catalytic motifs. The subfamilies are defined based on the location and the observed or predicted fold of a so-called "capping domain", or the absence of such a domain. Subfamily I consists of sequences in which the capping domain is found in between the first and second catalytic motifs. Subfamily II consists of sequences in which the capping domain is found between the second and third motifs. Subfamily III sequences have no capping domain in either of these positions.The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that representing it with a single model is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)D, (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only one of the variants each. Variant 3 (this model) is found in the enzymes beta-phosphoglucomutase (TIGR01990) and deoxyglucose-6-phosphatase, while many other enzymes of subfamily IA exhibit this variant as well as variant 1 (TIGR01549). These three variant models were created withthe knowledge that there will be overlap among them - this is by design and serves the purpose of eliminating the overlap with models of more distantly relatedHAD subfamilies caused by an overly broad single model [Unknown function, Enzymes of unknown specificity]. Length = 177

>gnl|CDD|222115 pfam13419, HAD_2, Haloacid dehalogenase-like hydrolase

 Score = 80.8 bits (200), Expect = 2e-18
 Identities = 51/236 (21%), Positives = 88/236 (37%), Gaps = 63/236 (26%)

Query: 17  LLFDLDDTLYPYSSGIAAACGQNIKDYMVEKLGIERSKIEDLGNLLYKNYGTTMAGLRAI 76
           ++FDLD TL  +   I  A    ++D   E+LG++ S  E+L       +   +A L   
Sbjct: 1   IIFDLDGTLIDFDPVIFEA----LRDLAAERLGLDIS-AEELREAGGLPFDEALADL-LR 54

Query: 77  GYDFDYDDYHSFVHGRLPYENLKPDPVLRSLLLSLP---LRKIIFTNADKVHAVKVLSRL 133
            +  D D+    +        L+P P +  LL  L    ++ +I +N  +    ++L +L
Sbjct: 55  EHPIDPDEILEALLEYNLESRLEPFPDVVELLRRLKAKGVKLVILSNGSREAVERLLEKL 114

Query: 134 GLEDCFEGIICFETLNPTHKNTVSDDEDDIAFVESAASTTTSANGPQIFDIIGHFAQPNP 193
           GL D F+ +              SDD                                  
Sbjct: 115 GLLDLFDAVFT------------SDD---------------------------------- 128

Query: 194 SLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTVLI 249
             V   K      P   A E+ L+   + P+  LF +DS  +++A +  G+ TV +
Sbjct: 129 --VGARK------PDPEAYERVLERLGLPPEEILFIDDSPEDLEAARAAGIKTVHV 176

Length = 176

>gnl|CDD|223943 COG1011, COG1011, Predicted hydrolase (HAD superfamily) [General function prediction only]

 Score = 71.9 bits (176), Expect = 8e-15
 Identities = 57/274 (20%), Positives = 88/274 (32%), Gaps = 69/274 (25%)

Query: 17  LLFDLDDTLYPYSSGIAAACGQNIKDYMVEKLGIERSKIEDLGNL--------LYKNYGT 68
           +LFDLD TL  + S    A      +  V +   E + ++ +  L            YG 
Sbjct: 7   ILFDLDGTLLDFDSAEFRAVLAEFAEIGVPETLEELALLKLIEKLEARFLRGEYTGEYGL 66

Query: 69  TMAGLRAIGYDFDYDDYHSFVHGRLP-YENLKPDPV-LRSLLLSL--PLRKIIFTNADKV 124
           T+  L  +      D+    V   L     L PD       L  L    +  I TN  + 
Sbjct: 67  TLERLLELLERLLGDEDAELVEELLAALAKLLPDYPEALEALKELGKKYKLGILTNGARP 126

Query: 125 HAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSDDEDDIAFVESAASTTTSANGPQIFDI 184
           H  + L +LGL D F+ +             +S+D                         
Sbjct: 127 HQERKLRQLGLLDYFDAVF------------ISED------------------------- 149

Query: 185 IGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRN-IQAGKRVG 243
           +G                   KP     E AL+   + P+  LF  DS+ N I   + +G
Sbjct: 150 VGV-----------------AKPDPEIFEYALEKLGVPPEEALFVGDSLENDILGARALG 192

Query: 244 LDTVLI--GKSQRVKGADYAFESIHNIKEAIPEL 275
           + TV I  G        +     I ++ E +  L
Sbjct: 193 MKTVWINRGGKPLPDALEAPDYEISSLAELLDLL 226

Length = 229

>gnl|CDD|222003 pfam13242, Hydrolase_like, HAD-hyrolase-like

 Score = 47.7 bits (114), Expect = 1e-07
 Identities = 13/71 (18%), Positives = 30/71 (42%), Gaps = 5/71 (7%)

Query: 206 KPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTVLI--GKSQRVKGADYAFE 263
           KP+   +  AL+   ++P+  +   DS  +I A +  G+ T+L+  G +           
Sbjct: 4   KPNPGMLRAALERLGVDPEECVMIGDSDTDILAARAAGIRTILVLTGVTTAEDLERAPGR 63

Query: 264 S---IHNIKEA 271
               + ++ + 
Sbjct: 64  PDYVVDSLADL 74

Length = 74

>gnl|CDD|162787 TIGR02253, CTE7, HAD superfamily (subfamily IA) hydrolase, TIGR02253

 Score = 47.8 bits (114), Expect = 2e-06
 Identities = 52/253 (20%), Positives = 92/253 (36%), Gaps = 65/253 (25%)

Query: 18  LFDLDDTLYPYSSGIAAACGQNIKDYMVEKLGIERSKIEDLGNLLYKNYGTTMAG----- 72
            FDLDDTL   S     A    I+  +   L ++  +  +    L K YG+         
Sbjct: 6   FFDLDDTLIDTSGLAEKARRNAIEVLIEAGLNVDFEEAYEELLKLIKEYGSNYPTHFDYL 65

Query: 73  LRAIGYDFDYDDYHSFV--HGRLPYENLKPDPVLRSLLLSL---PLRKIIFTNADKVHAV 127
           +R +  +++     +FV  + +L +  L+  P +R  L+ L     R  I T+   V   
Sbjct: 66  IRRLWEEYNPKLVAAFVYAYHKLKFAYLRVYPGVRDTLMELRESGYRLGIITDGLPVKQW 125

Query: 128 KVLSRLGLEDCFEGIICFETLNPTHKNTVSDDEDDIAFVESAASTTTSANGPQIFDIIGH 187
           + L RLG+ D F+ +I             S++E                           
Sbjct: 126 EKLERLGVRDFFDAVI------------TSEEEG-------------------------- 147

Query: 188 FAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSV-RNIQAGKRVGLDT 246
             +P+P +                   ALK   + P+  +   D + ++I+  K +G+ T
Sbjct: 148 VEKPHPKI----------------FYAALKRLGVKPEEAVMVGDRLDKDIKGAKNLGMKT 191

Query: 247 VLIGKSQRVKGAD 259
           V I + +  K  D
Sbjct: 192 VWINQGKSSKMED 204

This family of sequences from archaea and metazoans includes the human uncharacterized protein CTE7. Pyrococcus species appear to have three different forms of this enzyme, so it is unclear whether all members of this family have the same function. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Length = 221

>gnl|CDD|119389 cd01427, HAD_like, Haloacid dehalogenase-like hydrolases

 Score = 45.8 bits (109), Expect = 3e-06
 Identities = 25/134 (18%), Positives = 45/134 (33%), Gaps = 38/134 (28%)

Query: 116 IIFTNADKVHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSDDEDDIAFVESAASTTTS 175
            + TN  +   +++L  LGL+D F+ +I                                
Sbjct: 44  ALATNKSRREVLELLEELGLDDYFDPVIT------------------------------- 72

Query: 176 ANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRN 235
           +NG  I+                       KP+   +  ALK+  ++P+  L   DS+ +
Sbjct: 73  SNGAAIYYPKEGLFLGGGPFDIG-------KPNPDKLLAALKLLGVDPEEVLMVGDSLND 125

Query: 236 IQAGKRVGLDTVLI 249
           I+  K  G   V +
Sbjct: 126 IEMAKAAGGLGVAV 139

The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases. Length = 139

>gnl|CDD|216069 pfam00702, Hydrolase, haloacid dehalogenase-like hydrolase

 Score = 44.6 bits (105), Expect = 1e-05
 Identities = 45/244 (18%), Positives = 61/244 (25%), Gaps = 71/244 (29%)

Query: 14  YDCLLFDLDDTLYPYSSGI---------AAACGQNIKDYMVEKLGIE--RSKIEDLGNLL 62
              ++FDLD TL      +         AAA G  I     E L  E     +  L    
Sbjct: 1   IKAVVFDLDGTLTDGEPVVPEAEALLEAAAALGVAIVIAAGENLTKEGREELVRRLLLRA 60

Query: 63  YKNYGTTMAGLRAIGYDFDYDDYHSFVHGRLPYENLKPDPVLRSLLLSLPLRKI---IFT 119
                     LRA        D        L        P  R  L  L    I   I T
Sbjct: 61  LAGEELLEELLRAGATVVAVLDLVVL---GLIALTDPLYPGAREALKELKEAGIKLAILT 117

Query: 120 NADKVHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSDDEDDIAFVESAASTTTSANGP 179
             +++ A  +   LGL   F+ ++  +                                 
Sbjct: 118 GDNRLTANAIARLLGL---FDALVSADLY------------------------------- 143

Query: 180 QIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAG 239
                                     KP     E AL+   + P+  L   D V +I A 
Sbjct: 144 --------------------GLVGVGKPDPKIFELALEELGVKPEEVLMVGDGVNDIPAA 183

Query: 240 KRVG 243
           K  G
Sbjct: 184 KAAG 187

This family is structurally different from the alpha/beta hydrolase family (pfam00561). This family includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure of the family consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of Pseudomonas sp. (S)-2-haloacid dehalogenase 1. The rest of the fold is composed of the core alpha/beta domain. Those members with the characteristic DxD triad at the N-terminus are probably phosphatidylglycerolphosphate (PGP) phosphatases involved in cardiolipin biosynthesis in the mitochondria. Length = 187

>gnl|CDD|223620 COG0546, Gph, Predicted phosphatases [General function prediction only]

 Score = 44.8 bits (106), Expect = 1e-05
 Identities = 50/279 (17%), Positives = 89/279 (31%), Gaps = 79/279 (28%)

Query: 13  KYDCLLFDLDDTLYPYSSGIAAACGQNIKDYMVEKLGIERSKIEDLGNL----------- 61
               +LFDLD TL   +  I  A      +  + +LG+     E++  L           
Sbjct: 3   MIKAILFDLDGTLVDSAEDILRA-----FNAALAELGLPPLDEEEIRQLIGLGLDELIER 57

Query: 62  LYKNYGTTMAGLRAIGYDFDYDDYHSFVHGRLPYENLKPDPVLRSLLLSLPLRKIIFTNA 121
           L        A         ++   ++ +     +  +K   +L   L S   +  I TN 
Sbjct: 58  LLGEADEEAAAELVERLREEFLTAYAELLESRLFPGVKE--LLA-ALKSAGYKLGIVTNK 114

Query: 122 DKVHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSDDEDDIAFVESAASTTTSANGPQI 181
            +     +L  LGL D F+ I+  + + P  K                            
Sbjct: 115 PERELDILLKALGLADYFDVIVGGDDV-PPPK---------------------------- 145

Query: 182 FDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKR 241
                    P+P                  +   L+   ++P+  L   DS+ +I A K 
Sbjct: 146 ---------PDP----------------EPLLLLLEKLGLDPEEALMVGDSLNDILAAKA 180

Query: 242 VGLDTVLI--GKSQRVK----GADYAFESIHNIKEAIPE 274
            G+  V +  G + R +    GAD   +S+  +   + E
Sbjct: 181 AGVPAVGVTWGYNSREELAQAGADVVIDSLAELLALLAE 219

Length = 220

>gnl|CDD|223720 COG0647, NagD, Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism]

 Score = 44.1 bits (105), Expect = 3e-05
 Identities = 22/85 (25%), Positives = 34/85 (40%), Gaps = 9/85 (10%)

Query: 200 KTPIACKPSELAIEKALKIASINPQRTLFFEDSVRN-IQAGKRVGLDTVLI--GKSQRVK 256
           +  +  KPS    E AL+   ++    L   D +   I   K  GLDT+L+  G S    
Sbjct: 184 EPTVIGKPSPAIYEAALEKLGLDRSEVLMVGDRLDTDILGAKAAGLDTLLVLTGVSSAED 243

Query: 257 GA------DYAFESIHNIKEAIPEL 275
                    Y  +S+  +  A+ EL
Sbjct: 244 LDRAEVKPTYVVDSLAELITALKEL 268

Length = 269

>gnl|CDD|233463 TIGR01549, HAD-SF-IA-v1, haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E

 Score = 41.6 bits (98), Expect = 9e-05
 Identities = 29/129 (22%), Positives = 48/129 (37%), Gaps = 12/129 (9%)

Query: 17  LLFDLDDTLYPYSSGIAAACGQNIKDYMVEKLGIERSKIE-DLGNLLYKNYGTTMAGLRA 75
           +LFD+D TL      I  A  Q  +++ +     +R K    L   L     T    L  
Sbjct: 2   ILFDIDGTLVDIKFAIRRAFAQTFEEFGLNPAAFKRLKALRGLAEELLWRIATEA--LEE 59

Query: 76  IGYDFDYDDYHSFVHGRLPYENLKPDPVLRSLLLSLPLRKIIFTNADKVHAVKVLSRLGL 135
           +     YD   +++ G           +L  L  +  ++  I +N        +L + GL
Sbjct: 60  LQGHIGYDAEEAYIPG--------AADLLPRLKEA-GIKLGIISNGSLRAQKLLLRKHGL 110

Query: 136 EDCFEGIIC 144
            D FE I+ 
Sbjct: 111 GDYFELILG 119

This model represents part of one structural subfamily of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The superfamily is defined by the presence of three short catalytic motifs. The subfamilies are defined based on the location and the observed or predicted fold of a so-called "capping domain", or the absence of such a domain. Subfamily I consists of sequences in which the capping domain is found in between the first and second catalytic motifs. Subfamily II consists of sequences in which the capping domain is found between the second and third motifs. Subfamily III sequences have no capping domain in either of these positions.The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that modelling it with a single representation is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)(D/E), (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only one of the variants each. Variant 1 (this model) is found in the enzymes phosphoglycolate phosphatase (TIGR01449) and enolase-phosphatase. These three variant models (see also TIGR01493 and TIGR01509) were created withthe knowledge that there will be overlap among them - this is by design and serves the purpose of eliminating the overlap with models of more distantly relatedHAD subfamilies caused by an overly broad single model [Unknown function, Enzymes of unknown specificity]. Length = 162

>gnl|CDD|223710 COG0637, COG0637, Predicted phosphatase/phosphohexomutase [General function prediction only]

 Score = 38.9 bits (91), Expect = 0.002
 Identities = 58/278 (20%), Positives = 94/278 (33%), Gaps = 74/278 (26%)

Query: 13  KYDCLLFDLDDTLYPYSSGIAAACGQNIKDYMVEKLGIERSKIEDLGNLLYKNYGTTMAG 72
               ++FD+D TL   S  + A       +  +++ GIE S  E++  L        +  
Sbjct: 1   MIKAVIFDMDGTLV-DSEPLHARA---WLE-ALKEYGIEISD-EEIRELHGGGIARIID- 53

Query: 73  LRAIGYDFDYDDYHSFVHGRLPY------ENLKPDPVLRSLLLSLPLRKIIF---TNADK 123
           L       +     + +   L        E LKP P +  LL  L  R I     +++ +
Sbjct: 54  LLRKLAAGEDPADLAELERLLYEAEALELEGLKPIPGVVELLEQLKARGIPLAVASSSPR 113

Query: 124 VHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSDDEDDIAFVESAASTTTSANGPQIFD 183
             A +VL+RLGL D F+ I+                 DD+A  + A         P I+ 
Sbjct: 114 RAAERVLARLGLLDYFDVIV---------------TADDVARGKPA---------PDIY- 148

Query: 184 IIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVG 243
                      L+A                + L +   +P+  +  EDS   IQA K  G
Sbjct: 149 -----------LLAA---------------ERLGV---DPEECVVVEDSPAGIQAAKAAG 179

Query: 244 LDTVLIGKSQRVKGADYAFESIHNIKEA----IPELWE 277
           +  V +         D       +        +P L E
Sbjct: 180 MRVVGVPAGHDRPHLDPLDAHGADTVLLDLAELPALLE 217

Length = 221

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	298
KOG3109	244	consensus Haloacid dehalogenase-like hydrolase [Ge	99.97
TIGR01993	184	Pyr-5-nucltdase pyrimidine 5'-nucleotidase. These	99.94
PRK13288	214	pyrophosphatase PpaX; Provisional	99.94
PLN02770	248	haloacid dehalogenase-like hydrolase family protei	99.93
COG0546	220	Gph Predicted phosphatases [General function predi	99.93
TIGR03351	220	PhnX-like phosphonatase-like hydrolase. This clade	99.93
PRK13226	229	phosphoglycolate phosphatase; Provisional	99.93
PRK10826	222	2-deoxyglucose-6-phosphatase; Provisional	99.92
TIGR02253	221	CTE7 HAD superfamily (subfamily IA) hydrolase, TIG	99.92
PRK13478	267	phosphonoacetaldehyde hydrolase; Provisional	99.92
TIGR01422	253	phosphonatase phosphonoacetaldehyde hydrolase. Thi	99.92
PRK10563	221	6-phosphogluconate phosphatase; Provisional	99.92
PLN03243	260	haloacid dehalogenase-like hydrolase; Provisional	99.92
TIGR01454	205	AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthes	99.92
PRK11587	218	putative phosphatase; Provisional	99.92
TIGR01449	213	PGP_bact 2-phosphoglycolate phosphatase, prokaryot	99.92
PLN02575	381	haloacid dehalogenase-like hydrolase	99.92
PRK13222	226	phosphoglycolate phosphatase; Provisional	99.91
TIGR02254	224	YjjG/YfnB HAD superfamily (subfamily IA) hydrolase	99.91
PRK13225	273	phosphoglycolate phosphatase; Provisional	99.91
PRK14988	224	GMP/IMP nucleotidase; Provisional	99.91
PRK09449	224	dUMP phosphatase; Provisional	99.91
PRK13223	272	phosphoglycolate phosphatase; Provisional	99.9
COG1011	229	Predicted hydrolase (HAD superfamily) [General fun	99.9
COG0637	221	Predicted phosphatase/phosphohexomutase [General f	99.9
PRK10725	188	fructose-1-P/6-phosphogluconate phosphatase; Provi	99.9
PLN02940	382	riboflavin kinase	99.89
PRK10748	238	flavin mononucleotide phosphatase; Provisional	99.89
PRK06698	459	bifunctional 5'-methylthioadenosine/S-adenosylhomo	99.88
TIGR01428	198	HAD_type_II 2-haloalkanoic acid dehalogenase, type	99.88
TIGR02009	185	PGMB-YQAB-SF beta-phosphoglucomutase family hydrol	99.87
PLN02779	286	haloacid dehalogenase-like hydrolase family protei	99.87
TIGR01990	185	bPGM beta-phosphoglucomutase. The enzyme from L. l	99.86
TIGR02252	203	DREG-2 REG-2-like, HAD superfamily (subfamily IA)	99.86
PF13419	176	HAD_2: Haloacid dehalogenase-like hydrolase; PDB:	99.85
TIGR01509	183	HAD-SF-IA-v3 haloacid dehalogenase superfamily, su	99.84
PHA02597	197	30.2 hypothetical protein; Provisional	99.83
PLN02919	1057	haloacid dehalogenase-like hydrolase family protei	99.82
TIGR00338	219	serB phosphoserine phosphatase SerB. Phosphoserine	99.82
TIGR02247	211	HAD-1A3-hyp Epoxide hydrolase N-terminal domain-li	99.82
PRK09456	199	?-D-glucose-1-phosphatase; Provisional	99.81
TIGR01493	175	HAD-SF-IA-v2 Haloacid dehalogenase superfamily, su	99.8
TIGR01548	197	HAD-SF-IA-hyp1 haloacid dehalogenase superfamily,	99.79
TIGR01549	154	HAD-SF-IA-v1 haloacid dehalogenase superfamily, su	99.78
PLN02811	220	hydrolase	99.77
PLN02954	224	phosphoserine phosphatase	99.76
PRK08942	181	D,D-heptose 1,7-bisphosphate phosphatase; Validate	99.76
TIGR01491	201	HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPa	99.75
PRK11133	322	serB phosphoserine phosphatase; Provisional	99.74
PRK13582	205	thrH phosphoserine phosphatase; Provisional	99.74
PRK06769	173	hypothetical protein; Validated	99.73
TIGR00213	176	GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase	99.73
KOG3085	237	consensus Predicted hydrolase (HAD superfamily) [G	99.71
PRK09552	219	mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosp	99.7
TIGR01656	147	Histidinol-ppas histidinol-phosphate phosphatase f	99.68
KOG2914	222	consensus Predicted haloacid-halidohydrolase and r	99.67
TIGR01691	220	enolase-ppase 2,3-diketo-5-methylthio-1-phosphopen	99.66
TIGR01662	132	HAD-SF-IIIA HAD-superfamily hydrolase, subfamily I	99.65
TIGR01685	174	MDP-1 magnesium-dependent phosphatase-1. This mode	99.63
TIGR02137	203	HSK-PSP phosphoserine phosphatase/homoserine phosp	99.62
COG0560	212	SerB Phosphoserine phosphatase [Amino acid transpo	99.61
TIGR01261	161	hisB_Nterm histidinol-phosphatase. This model desc	99.61
TIGR01672	237	AphA HAD superfamily (subfamily IIIB) phosphatase,	99.61
cd01427	139	HAD_like Haloacid dehalogenase-like hydrolases. Th	99.59
TIGR02726	169	phenyl_P_delta phenylphosphate carboxylase, delta	99.58
TIGR01664	166	DNA-3'-Pase DNA 3'-phosphatase. The central phosph	99.58
TIGR01489	188	DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopent	99.58
TIGR01670	154	YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-pho	99.57
PRK01158	230	phosphoglycolate phosphatase; Provisional	99.55
TIGR01458	257	HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydr	99.55
TIGR03333	214	salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl	99.53
TIGR01490	202	HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrol	99.52
TIGR01488	177	HAD-SF-IB Haloacid Dehalogenase superfamily, subfa	99.51
PRK10530	272	pyridoxal phosphate (PLP) phosphatase; Provisional	99.49
TIGR01668	170	YqeG_hyp_ppase HAD superfamily (subfamily IIIA) ph	99.49
PRK09484	183	3-deoxy-D-manno-octulosonate 8-phosphate phosphata	99.48
PRK05446	354	imidazole glycerol-phosphate dehydratase/histidino	99.48
PRK10513	270	sugar phosphate phosphatase; Provisional	99.47
PRK10444	248	UMP phosphatase; Provisional	99.47
PLN02645	311	phosphoglycolate phosphatase	99.47
TIGR01457	249	HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydr	99.47
PRK10976	266	putative hydrolase; Provisional	99.45
PRK15126	272	thiamin pyrimidine pyrophosphate hydrolase; Provis	99.44
TIGR01452	279	PGP_euk phosphoglycolate/pyridoxal phosphate phosp	99.44
TIGR01681	128	HAD-SF-IIIC HAD-superfamily phosphatase, subfamily	99.43
PRK11009	237	aphA acid phosphatase/phosphotransferase; Provisio	99.42
COG0647	269	NagD Predicted sugar phosphatases of the HAD super	99.42
smart00577	148	CPDc catalytic domain of ctd-like phosphatases.	99.41
TIGR01482	225	SPP-subfamily Sucrose-phosphate phosphatase subfam	99.41
PHA02530	300	pseT polynucleotide kinase; Provisional	99.41
COG0561	264	Cof Predicted hydrolases of the HAD superfamily [G	99.4
PF00702	215	Hydrolase: haloacid dehalogenase-like hydrolase; I	99.38
PLN02887	580	hydrolase family protein	99.37
PRK00192	273	mannosyl-3-phosphoglycerate phosphatase; Reviewed	99.35
TIGR01487	215	SPP-like sucrose-phosphate phosphatase-like hydrol	99.35
COG2179	175	Predicted hydrolase of the HAD superfamily [Genera	99.33
PF13242	75	Hydrolase_like: HAD-hyrolase-like; PDB: 2P27_A 2OY	99.33
TIGR01456	321	CECR5 HAD-superfamily class IIA hydrolase, TIGR014	99.3
PRK03669	271	mannosyl-3-phosphoglycerate phosphatase; Reviewed	99.28
PF06888	234	Put_Phosphatase: Putative Phosphatase; InterPro: I	99.24
PRK11590	211	hypothetical protein; Provisional	99.24
KOG2882	306	consensus p-Nitrophenyl phosphatase [Inorganic ion	99.21
KOG1615	227	consensus Phosphoserine phosphatase [Amino acid tr	99.2
TIGR01686	320	FkbH FkbH-like domain. The C-terminal portion of t	99.15
TIGR02463	221	MPGP_rel mannosyl-3-phosphoglycerate phosphatase-r	99.14
TIGR00099	256	Cof-subfamily Cof subfamily of IIB subfamily of ha	99.13
TIGR02244	343	HAD-IG-Ncltidse HAD superfamily (subfamily IG) hyd	99.11
COG0241	181	HisB Histidinol phosphatase and related phosphatas	99.09
TIGR01544	277	HAD-SF-IE haloacid dehalogenase superfamily, subfa	99.09
COG1778	170	Low specificity phosphatase (HAD superfamily) [Gen	99.05
KOG3120	256	consensus Predicted haloacid dehalogenase-like hyd	99.05
TIGR01460	236	HAD-SF-IIA Haloacid Dehalogenase Superfamily Class	99.04
TIGR01663	526	PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase	99.03
PRK08238	479	hypothetical protein; Validated	99.03
TIGR01486	256	HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosph	99.03
PF08282	254	Hydrolase_3: haloacid dehalogenase-like hydrolase;	99.02
TIGR02471	236	sucr_syn_bact_C sucrose phosphate synthase, sucros	98.94
TIGR01545	210	YfhB_g-proteo haloacid dehalogenase superfamily, s	98.93
COG4359	220	Uncharacterized conserved protein [Function unknow	98.9
PRK14502	694	bifunctional mannosyl-3-phosphoglycerate synthase/	98.85
PF12689	169	Acid_PPase: Acid Phosphatase; InterPro: IPR010036	98.85
PTZ00445	219	p36-lilke protein; Provisional	98.85
TIGR01485	249	SPP_plant-cyano sucrose-6F-phosphate phosphohydrol	98.84
TIGR01459	242	HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolas	98.83
TIGR01533	266	lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) famil	98.8
COG4229	229	Predicted enolase-phosphatase [Energy production a	98.8
PF12710	192	HAD: haloacid dehalogenase-like hydrolase; PDB: 3P	98.79
KOG3040	262	consensus Predicted sugar phosphatase (HAD superfa	98.75
PRK10187	266	trehalose-6-phosphate phosphatase; Provisional	98.73
TIGR01459	242	HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolas	98.7
PF09419	168	PGP_phosphatase: Mitochondrial PGP phosphatase; In	98.68
TIGR02461	225	osmo_MPG_phos mannosyl-3-phosphoglycerate phosphat	98.62
TIGR01512	536	ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translo	98.6
TIGR01525	556	ATPase-IB_hvy heavy metal translocating P-type ATP	98.55
TIGR01511	562	ATPase-IB1_Cu copper-(or silver)-translocating P-t	98.48
PLN02423	245	phosphomannomutase	98.36
PTZ00174	247	phosphomannomutase; Provisional	98.35
TIGR02251	162	HIF-SF_euk Dullard-like phosphatase domain. This d	98.28
TIGR01522	884	ATPase-IIA2_Ca golgi membrane calcium-translocatin	98.27
PF08645	159	PNK3P: Polynucleotide kinase 3 phosphatase; InterP	98.24
PRK12702	302	mannosyl-3-phosphoglycerate phosphatase; Reviewed	98.22
TIGR01684	301	viral_ppase viral phosphatase. These proteins also	98.21
TIGR00685	244	T6PP trehalose-phosphatase. At least 18 distinct s	98.2
PF05116	247	S6PP: Sucrose-6F-phosphate phosphohydrolase; Inter	98.19
COG4087	152	Soluble P-type ATPase [General function prediction	98.18
COG4996	164	Predicted phosphatase [General function prediction	98.15
PRK10671	834	copA copper exporting ATPase; Provisional	98.12
PF06941	191	NT5C: 5' nucleotidase, deoxy (Pyrimidine), cytosol	98.08
PF05761	448	5_nucleotid: 5' nucleotidase family; InterPro: IPR	98.06
PLN02177	497	glycerol-3-phosphate acyltransferase	98.03
PHA03398	303	viral phosphatase superfamily protein; Provisional	97.96
TIGR01116	917	ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium	97.83
PRK11033	741	zntA zinc/cadmium/mercury/lead-transporting ATPase	97.73
TIGR01675	229	plant-AP plant acid phosphatase. This model explic	97.7
COG4030	315	Uncharacterized protein conserved in archaea [Func	97.7
TIGR01484	204	HAD-SF-IIB HAD-superfamily hydrolase, subfamily II	97.63
PRK14010	673	potassium-transporting ATPase subunit B; Provision	97.62
PF03767	229	Acid_phosphat_B: HAD superfamily, subfamily IIIB (	97.58
TIGR01497	675	kdpB K+-transporting ATPase, B subunit. One sequen	97.56
COG2503	274	Predicted secreted acid phosphatase [General funct	97.51
TIGR01524	867	ATPase-IIIB_Mg magnesium-translocating P-type ATPa	97.49
PRK01122	679	potassium-transporting ATPase subunit B; Provision	97.48
PRK10517	902	magnesium-transporting ATPase MgtA; Provisional	97.47
PF11019	252	DUF2608: Protein of unknown function (DUF2608); In	97.46
COG2217	713	ZntA Cation transport ATPase [Inorganic ion transp	97.45
PF13344	101	Hydrolase_6: Haloacid dehalogenase-like hydrolase;	97.37
PF03031	159	NIF: NLI interacting factor-like phosphatase; Inte	97.33
TIGR01517	941	ATPase-IIB_Ca plasma-membrane calcium-translocatin	97.27
PRK15122	903	magnesium-transporting ATPase; Provisional	97.27
smart00775	157	LNS2 LNS2 domain. This domain is found in Saccharo	97.25
TIGR01523	1053	ATPase-IID_K-Na potassium and/or sodium efflux P-t	97.2
COG0474	917	MgtA Cation transport ATPase [Inorganic ion transp	97.12
PLN02382	413	probable sucrose-phosphatase	97.11
TIGR01647	755	ATPase-IIIA_H plasma-membrane proton-efflux P-type	97.1
PRK14501	726	putative bifunctional trehalose-6-phosphate syntha	97.0
COG3700	237	AphA Acid phosphatase (class B) [General function	96.94
TIGR01680	275	Veg_Stor_Prot vegetative storage protein. The prot	96.92
TIGR01106	997	ATPase-IIC_X-K sodium or proton efflux -- potassiu	96.92
PLN02499	498	glycerol-3-phosphate acyltransferase	96.83
TIGR02250	156	FCP1_euk FCP1-like phosphatase, phosphatase domain	96.54
PLN02580	384	trehalose-phosphatase	96.54
KOG0202	972	consensus Ca2+ transporting ATPase [Inorganic ion	96.44
KOG0207	951	consensus Cation transport ATPase [Inorganic ion t	96.36
PF05152	297	DUF705: Protein of unknown function (DUF705); Inte	96.27
PLN02645	311	phosphoglycolate phosphatase	96.1
PLN02205	854	alpha,alpha-trehalose-phosphate synthase [UDP-form	96.07
COG5663	194	Uncharacterized conserved protein [Function unknow	96.04
TIGR01652	1057	ATPase-Plipid phospholipid-translocating P-type AT	95.81
TIGR01494	499	ATPase_P-type ATPase, P-type (transporting), HAD s	95.78
COG1877	266	OtsB Trehalose-6-phosphatase [Carbohydrate transpo	95.62
COG3882	574	FkbH Predicted enzyme involved in methoxymalonyl-A	95.43
TIGR02245	195	HAD_IIID1 HAD-superfamily subfamily IIID hydrolase	95.42
TIGR01657	1054	P-ATPase-V P-type ATPase of unknown pump specifici	95.42
COG5610	635	Predicted hydrolase (HAD superfamily) [General fun	95.4
KOG2630	254	consensus Enolase-phosphatase E-1 [Amino acid tran	95.35
KOG2469	424	consensus IMP-GMP specific 5'-nucleotidase [Nucleo	94.78
COG3769	274	Predicted hydrolase (HAD superfamily) [General fun	94.76
PLN02151	354	trehalose-phosphatase	93.82
PLN03017	366	trehalose-phosphatase	93.69
TIGR01689	126	EcbF-BcbF capsule biosynthesis phosphatase. Due to	93.22
TIGR01658	274	EYA-cons_domain eyes absent protein conserved doma	92.55
PF05822	246	UMPH-1: Pyrimidine 5'-nucleotidase (UMPH-1); Inter	92.14
COG2216	681	KdpB High-affinity K+ transport system, ATPase cha	91.67
KOG0204	1034	consensus Calcium transporting ATPase [Inorganic i	91.31
TIGR01484	204	HAD-SF-IIB HAD-superfamily hydrolase, subfamily II	91.09
PLN03190	1178	aminophospholipid translocase; Provisional	91.02
KOG2470	510	consensus Similar to IMP-GMP specific 5'-nucleotid	90.85
TIGR01452	279	PGP_euk phosphoglycolate/pyridoxal phosphate phosp	89.95
KOG0210	1051	consensus P-type ATPase [Inorganic ion transport a	89.59
TIGR02468	1050	sucrsPsyn_pln sucrose phosphate synthase/possible	89.58
KOG2961	190	consensus Predicted hydrolase (HAD superfamily) [G	89.14
COG0647	269	NagD Predicted sugar phosphatases of the HAD super	85.84
PF08235	157	LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209	83.88
PF06189	264	5-nucleotidase: 5'-nucleotidase; InterPro: IPR0103	82.76
KOG3107	468	consensus Predicted haloacid dehalogenase-like hyd	82.74
PLN02580	384	trehalose-phosphatase	82.73
KOG1605	262	consensus TFIIF-interacting CTD phosphatase, inclu	80.72
KOG0209	1160	consensus P-type ATPase [Inorganic ion transport a	80.02

>KOG3109 consensus Haloacid dehalogenase-like hydrolase [General function prediction only]

Probab=99.97  E-value=3.5e-30  Score=219.28  Aligned_cols=231  Identities=61%  Similarity=1.072  Sum_probs=215.2

Q ss_pred             CCCcccccccc-cCccEEEEeCCCCccCCCccHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHhCCCHHHHHHccCC
Q 022360            1 MEYEGRYRMAA-AKYDCLLFDLDDTLYPYSSGIAAACGQNIKDYMVEKLGIERSKIEDLGNLLYKNYGTTMAGLRAIGYD   79 (298)
Q Consensus         1 ~~~~~~~~~~~-~~~k~viFDlDGTL~d~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~   79 (298)
                      |.+++++...+ .++++++||+|+||++.+..+...+++.|.+|+.+.+|++.+.+..+...++..||.+..++...+..
T Consensus         1 m~f~~~~~~~~~~~~~~l~FDiDdtLYp~St~i~~~~~~nI~~f~~eklgi~~e~a~~L~~~~yk~YG~t~aGL~~~~~~   80 (244)
T KOG3109|consen    1 MTFEGDVFISSGPNYKCLFFDIDDTLYPLSTGIQLMMRNNIQEFFVEKLGISEEEAEELRESLYKEYGLTMAGLKAVGYI   80 (244)
T ss_pred             CCCCCcccccCCccceEEEEecccccccCchhHHHHHHHHHHHHHHHHhCCChhhhHHHHHHHHHHHhHHHHHHHHhccc
Confidence            67777777664 57899999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CChhhHHHHhhcccCCCCCCCChhHHHHHHhCCCc-EEEEeCCChHHHHHHHHHhCCCCccceeEeecCCCCCCCCCCCC
Q 022360           80 FDYDDYHSFVHGRLPYENLKPDPVLRSLLLSLPLR-KIIFTNADKVHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSD  158 (298)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~L~~l~~~-~~ivS~~~~~~~~~~l~~l~l~~~f~~i~~~~~~~~~~~~~~~~  158 (298)
                      .+.++|.++++++++++.++|.+.+.++|-.++.+ ..++||+...++.++++.+|+.++|+++++++.....       
T Consensus        81 ~d~deY~~~V~~~LPlq~LkPD~~LRnlLL~l~~r~k~~FTNa~k~HA~r~Lk~LGieDcFegii~~e~~np~-------  153 (244)
T KOG3109|consen   81 FDADEYHRFVHGRLPLQDLKPDPVLRNLLLSLKKRRKWIFTNAYKVHAIRILKKLGIEDCFEGIICFETLNPI-------  153 (244)
T ss_pred             CCHHHHHHHhhccCcHhhcCCCHHHHHHHHhCccccEEEecCCcHHHHHHHHHHhChHHhccceeEeeccCCC-------
Confidence            99999999999999999999999999999999977 9999999999999999999999999999999865431       


Q ss_pred             ChhhHHHHHhhhcccCCCCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCC-CCcEEEEcCCccchH
Q 022360          159 DEDDIAFVESAASTTTSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASIN-PQRTLFFEDSVRNIQ  237 (298)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~-p~~~i~iGDs~~Di~  237 (298)
                                                               +.|+.|||.+.+|+.+.+..|++ |.++++|.||.++|+
T Consensus       154 -----------------------------------------~~~~vcKP~~~afE~a~k~agi~~p~~t~FfDDS~~NI~  192 (244)
T KOG3109|consen  154 -----------------------------------------EKTVVCKPSEEAFEKAMKVAGIDSPRNTYFFDDSERNIQ  192 (244)
T ss_pred             -----------------------------------------CCceeecCCHHHHHHHHHHhCCCCcCceEEEcCchhhHH
Confidence                                                     23445999999999999999998 999999999999999


Q ss_pred             HHHHcCCeEEEecCCCCCCCCCEEeCCHHHHHHHhHHhhccC
Q 022360          238 AGKRVGLDTVLIGKSQRVKGADYAFESIHNIKEAIPELWESD  279 (298)
Q Consensus       238 ~a~~aG~~~v~v~~~~~~~~ad~i~~s~~~l~~~l~~~~~~~  279 (298)
                      +|+++||.+++++.......+++++.+.+...+.++.+|+..
T Consensus       193 ~ak~vGl~tvlv~~~~~~~~~d~~l~~ih~~k~a~p~l~~~~  234 (244)
T KOG3109|consen  193 TAKEVGLKTVLVGREHKIKGVDYALEQIHNNKEALPELWEIL  234 (244)
T ss_pred             HHHhccceeEEEEeeecccchHHHHHHhhchhhhchHHhhcc
Confidence            999999999999999999999999999999999999999863

>TIGR01993 Pyr-5-nucltdase pyrimidine 5'-nucleotidase

Probab=99.94  E-value=6.4e-26  Score=193.93  Aligned_cols=184  Identities=52%  Similarity=0.921  Sum_probs=152.6

Q ss_pred             cEEEEeCCCCccCCCccHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHhCCCHHHHHHccCCCChhhHHHHhhcccC
Q 022360           15 DCLLFDLDDTLYPYSSGIAAACGQNIKDYMVEKLGIERSKIEDLGNLLYKNYGTTMAGLRAIGYDFDYDDYHSFVHGRLP   94 (298)
Q Consensus        15 k~viFDlDGTL~d~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~   94 (298)
                      ++|+|||||||+|+...+..++.+.+.+++.+..|++......+....+..+|.....+... ...+.+.+...+.+...
T Consensus         1 ~~viFDlDGTL~ds~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~~~~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~   79 (184)
T TIGR01993         1 DVWFFDLDNTLYPHSAGIFLQIDRNITEFVAARLKLSEEEARVLRKDYYREYGTTLAGLMIL-HEIDADEYLRYVHGRLP   79 (184)
T ss_pred             CeEEEeCCCCCCCCcccHHHHHHHHHHHHHHHHcCcCHHHHHHHHHHHHHHHchHHHHHHHh-hCCCHHHHHHHHhccCC
Confidence            47999999999999999999999888887888889987766666666666677665554322 34456667776665444


Q ss_pred             CCCCCCChhHHHHHHhCCCcEEEEeCCChHHHHHHHHHhCCCCccceeEeecCCCCCCCCCCCCChhhHHHHHhhhcccC
Q 022360           95 YENLKPDPVLRSLLLSLPLRKIIFTNADKVHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSDDEDDIAFVESAASTTT  174 (298)
Q Consensus        95 ~~~~~~~~g~~~~L~~l~~~~~ivS~~~~~~~~~~l~~l~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  174 (298)
                      +....++||+.++|+.|+.+++|+||+....+...++++|+.++|+.++++++.+...                      
T Consensus        80 ~~~~~~~~g~~~~L~~L~~~~~i~Tn~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~~----------------------  137 (184)
T TIGR01993        80 YEKLKPDPELRNLLLRLPGRKIIFTNGDRAHARRALNRLGIEDCFDGIFCFDTANPDY----------------------  137 (184)
T ss_pred             HHhCCCCHHHHHHHHhCCCCEEEEeCCCHHHHHHHHHHcCcHhhhCeEEEeecccCcc----------------------
Confidence            4567899999999999999999999999999999999999999999999998766300                      


Q ss_pred             CCCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHHcCCeEEEe
Q 022360          175 SANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTVLI  249 (298)
Q Consensus       175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a~~aG~~~v~v  249 (298)
                                                  .++||+|++|..+++++|++|++|++|||+..|+++|+++|+.++++
T Consensus       138 ----------------------------~~~KP~p~~~~~~~~~~~~~~~~~l~vgD~~~di~aA~~~G~~~i~v  184 (184)
T TIGR01993       138 ----------------------------LLPKPSPQAYEKALREAGVDPERAIFFDDSARNIAAAKALGMKTVLV  184 (184)
T ss_pred             ----------------------------CCCCCCHHHHHHHHHHhCCCccceEEEeCCHHHHHHHHHcCCEEeeC
Confidence                                        01499999999999999999999999999999999999999999874

These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509).

>PRK13288 pyrophosphatase PpaX; Provisional

Probab=99.94  E-value=7.2e-26  Score=198.09  Aligned_cols=199  Identities=20%  Similarity=0.259  Sum_probs=148.4

Q ss_pred             cCccEEEEeCCCCccCCCccHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHhCCCHHHHHHccCCCChhhH----HH
Q 022360           12 AKYDCLLFDLDDTLYPYSSGIAAACGQNIKDYMVEKLGIERSKIEDLGNLLYKNYGTTMAGLRAIGYDFDYDDY----HS   87 (298)
Q Consensus        12 ~~~k~viFDlDGTL~d~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~----~~   87 (298)
                      |++++|+||+||||+|+...+..++...+++     ++.......    .+....|.+.............+.+    ..
T Consensus         1 m~~~~viFD~DGTL~ds~~~~~~a~~~~~~~-----~~~~~~~~~----~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~   71 (214)
T PRK13288          1 MKINTVLFDLDGTLINTNELIISSFLHTLKT-----YYPNQYKRE----DVLPFIGPSLHDTFSKIDESKVEEMITTYRE   71 (214)
T ss_pred             CCccEEEEeCCCcCccCHHHHHHHHHHHHHH-----hCCCCCCHH----HHHHHhCcCHHHHHHhcCHHHHHHHHHHHHH
Confidence            3589999999999999988888887764443     333211111    1223345554433221111111222    22


Q ss_pred             HhhcccCCCCCCCChhHHHHHHhCC---CcEEEEeCCChHHHHHHHHHhCCCCccceeEeecCCCCCCCCCCCCChhhHH
Q 022360           88 FVHGRLPYENLKPDPVLRSLLLSLP---LRKIIFTNADKVHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSDDEDDIA  164 (298)
Q Consensus        88 ~~~~~~~~~~~~~~~g~~~~L~~l~---~~~~ivS~~~~~~~~~~l~~l~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~  164 (298)
                      ..... ......++||+.++|+.|+   ++++|+||+....+...++.+|+..+|+.++++++...              
T Consensus        72 ~~~~~-~~~~~~~~~g~~~~l~~L~~~g~~~~i~S~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~--------------  136 (214)
T PRK13288         72 FNHEH-HDELVTEYETVYETLKTLKKQGYKLGIVTTKMRDTVEMGLKLTGLDEFFDVVITLDDVEH--------------  136 (214)
T ss_pred             HHHHh-hhhhcccCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCChhceeEEEecCcCCC--------------
Confidence            21111 1234678999999999885   67999999999999999999999999999999887654              


Q ss_pred             HHHhhhcccCCCCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHHcCC
Q 022360          165 FVESAASTTTSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGL  244 (298)
Q Consensus       165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a~~aG~  244 (298)
                                                              +||+|+.+.+++++++++|++|++|||+.+|+++|+++|+
T Consensus       137 ----------------------------------------~Kp~p~~~~~~~~~~~~~~~~~~~iGDs~~Di~aa~~aG~  176 (214)
T PRK13288        137 ----------------------------------------AKPDPEPVLKALELLGAKPEEALMVGDNHHDILAGKNAGT  176 (214)
T ss_pred             ----------------------------------------CCCCcHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCC
Confidence                                                    7999999999999999999999999999999999999999


Q ss_pred             eEEEecCCCC------CCCCCEEeCCHHHHHHHhHH
Q 022360          245 DTVLIGKSQR------VKGADYAFESIHNIKEAIPE  274 (298)
Q Consensus       245 ~~v~v~~~~~------~~~ad~i~~s~~~l~~~l~~  274 (298)
                      .++++.++..      ...++++++++.++.+++.+
T Consensus       177 ~~i~v~~g~~~~~~l~~~~~~~~i~~~~~l~~~i~~  212 (214)
T PRK13288        177 KTAGVAWTIKGREYLEQYKPDFMLDKMSDLLAIVGD  212 (214)
T ss_pred             eEEEEcCCCCCHHHHhhcCcCEEECCHHHHHHHHhh
Confidence            9999987642      34699999999999887754

>PLN02770 haloacid dehalogenase-like hydrolase family protein

Probab=99.93  E-value=2.1e-25  Score=199.95  Aligned_cols=199  Identities=25%  Similarity=0.299  Sum_probs=143.9

Q ss_pred             ccCccEEEEeCCCCccCCCccHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHhCCCHHHHH-HccC-CCC-----hh
Q 022360           11 AAKYDCLLFDLDDTLYPYSSGIAAACGQNIKDYMVEKLGIERSKIEDLGNLLYKNYGTTMAGLR-AIGY-DFD-----YD   83 (298)
Q Consensus        11 ~~~~k~viFDlDGTL~d~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~-~~~~-~~~-----~~   83 (298)
                      ..++++|+|||||||+|+...+..++...++++... .|++..... .   .....|.+..... .+.. ...     ..
T Consensus        19 ~~~~k~viFDlDGTLiDs~~~~~~a~~~~~~~~g~~-~g~~~~~~~-~---~~~~~G~~~~~~~~~~~~~~~~~~~~~~~   93 (248)
T PLN02770         19 LAPLEAVLFDVDGTLCDSDPLHYYAFREMLQEINFN-GGVPITEEF-F---VENIAGKHNEDIALGLFPDDLERGLKFTD   93 (248)
T ss_pred             cCccCEEEEcCCCccCcCHHHHHHHHHHHHHHhccc-cCCCCCHHH-H---HHHcCCCCHHHHHHHHcCcchhhHHHHHH
Confidence            355899999999999999888888888654442110 122222211 0   0111243333221 1110 000     01


Q ss_pred             hHHHHhhcccCCCCCCCChhHHHHHHhCC---CcEEEEeCCChHHHHHHHHHhCCCCccceeEeecCCCCCCCCCCCCCh
Q 022360           84 DYHSFVHGRLPYENLKPDPVLRSLLLSLP---LRKIIFTNADKVHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSDDE  160 (298)
Q Consensus        84 ~~~~~~~~~~~~~~~~~~~g~~~~L~~l~---~~~~ivS~~~~~~~~~~l~~l~l~~~f~~i~~~~~~~~~~~~~~~~~~  160 (298)
                      .+...+.. .......++||+.++|+.|+   ++++|+||+....++..++++++.++|+.++++++++.          
T Consensus        94 ~~~~~y~~-~~~~~~~l~pgv~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~~Fd~iv~~~~~~~----------  162 (248)
T PLN02770         94 DKEALFRK-LASEQLKPLNGLYKLKKWIEDRGLKRAAVTNAPRENAELMISLLGLSDFFQAVIIGSECEH----------  162 (248)
T ss_pred             HHHHHHHH-HHHhcCCcCccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCChhhCcEEEecCcCCC----------
Confidence            11111111 11235788999999999884   78999999999999999999999999999999998765          


Q ss_pred             hhHHHHHhhhcccCCCCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccchHHHH
Q 022360          161 DDIAFVESAASTTTSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGK  240 (298)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a~  240 (298)
                                                                  +||+|+.|.+++++++++|++|++|||+.+|+++|+
T Consensus       163 --------------------------------------------~KP~p~~~~~a~~~~~~~~~~~l~vgDs~~Di~aA~  198 (248)
T PLN02770        163 --------------------------------------------AKPHPDPYLKALEVLKVSKDHTFVFEDSVSGIKAGV  198 (248)
T ss_pred             --------------------------------------------CCCChHHHHHHHHHhCCChhHEEEEcCCHHHHHHHH
Confidence                                                        799999999999999999999999999999999999


Q ss_pred             HcCCeEEEecCCCC-----CCCCCEEeCCHHHHH
Q 022360          241 RVGLDTVLIGKSQR-----VKGADYAFESIHNIK  269 (298)
Q Consensus       241 ~aG~~~v~v~~~~~-----~~~ad~i~~s~~~l~  269 (298)
                      ++|+.++++.++..     ...++++++++.++.
T Consensus       199 ~aGi~~i~v~~g~~~~~l~~~~a~~vi~~~~e~~  232 (248)
T PLN02770        199 AAGMPVVGLTTRNPESLLMEAKPTFLIKDYEDPK  232 (248)
T ss_pred             HCCCEEEEEeCCCCHHHHhhcCCCEEeccchhhH
Confidence            99999999976542     457999999999944

>COG0546 Gph Predicted phosphatases [General function prediction only]

Probab=99.93  E-value=4.5e-25  Score=194.41  Aligned_cols=199  Identities=23%  Similarity=0.287  Sum_probs=149.1

Q ss_pred             cCccEEEEeCCCCccCCCccHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHhCCCHHHHHH--ccCC------CChh
Q 022360           12 AKYDCLLFDLDDTLYPYSSGIAAACGQNIKDYMVEKLGIERSKIEDLGNLLYKNYGTTMAGLRA--IGYD------FDYD   83 (298)
Q Consensus        12 ~~~k~viFDlDGTL~d~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~--~~~~------~~~~   83 (298)
                      +++++|+||+||||+|+...+..++..     ..+..|.+......+.    ...|........  .+..      ...+
T Consensus         2 ~~~~~iiFDlDGTL~Ds~~~~~~~~~~-----~~~~~~~~~~~~~~~~----~~ig~~~~~~~~~~~~~~~~~~~~~~~~   72 (220)
T COG0546           2 MMIKAILFDLDGTLVDSAEDILRAFNA-----ALAELGLPPLDEEEIR----QLIGLGLDELIERLLGEADEEAAAELVE   72 (220)
T ss_pred             CCCCEEEEeCCCccccChHHHHHHHHH-----HHHHcCCCCCCHHHHH----HHhcCCHHHHHHHHhccccchhHHHHHH
Confidence            568999999999999999988888774     6667777643333322    223333222211  0100      0112


Q ss_pred             hHHHHhhcccCCC-CCCCChhHHHHHHhCC---CcEEEEeCCChHHHHHHHHHhCCCCccceeEeecCCCCCCCCCCCCC
Q 022360           84 DYHSFVHGRLPYE-NLKPDPVLRSLLLSLP---LRKIIFTNADKVHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSDD  159 (298)
Q Consensus        84 ~~~~~~~~~~~~~-~~~~~~g~~~~L~~l~---~~~~ivS~~~~~~~~~~l~~l~l~~~f~~i~~~~~~~~~~~~~~~~~  159 (298)
                      .+.+.+....... ...++||+.++|..|+   ++++|+|+.....++..++++|+..+|+.+++.++...         
T Consensus        73 ~~~~~~~~~~~~~~~~~~~~gv~e~L~~L~~~g~~l~i~T~k~~~~~~~~l~~~gl~~~F~~i~g~~~~~~---------  143 (220)
T COG0546          73 RLREEFLTAYAELLESRLFPGVKELLAALKSAGYKLGIVTNKPERELDILLKALGLADYFDVIVGGDDVPP---------  143 (220)
T ss_pred             HHHHHHHHHHHhhccCccCCCHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHhCCccccceEEcCCCCCC---------
Confidence            2222222111111 2578999999999885   67899999999999999999999999999999554433         


Q ss_pred             hhhHHHHHhhhcccCCCCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccchHHH
Q 022360          160 EDDIAFVESAASTTTSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAG  239 (298)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a  239 (298)
                                                                   .||+|..+..+++++|++|++++||||+.+|+++|
T Consensus       144 ---------------------------------------------~KP~P~~l~~~~~~~~~~~~~~l~VGDs~~Di~aA  178 (220)
T COG0546         144 ---------------------------------------------PKPDPEPLLLLLEKLGLDPEEALMVGDSLNDILAA  178 (220)
T ss_pred             ---------------------------------------------CCcCHHHHHHHHHHhCCChhheEEECCCHHHHHHH
Confidence                                                         79999999999999999988999999999999999


Q ss_pred             HHcCCeEEEecCCC------CCCCCCEEeCCHHHHHHHhH
Q 022360          240 KRVGLDTVLIGKSQ------RVKGADYAFESIHNIKEAIP  273 (298)
Q Consensus       240 ~~aG~~~v~v~~~~------~~~~ad~i~~s~~~l~~~l~  273 (298)
                      +++|+.++++.++.      ....+|+++.++.+|...|.
T Consensus       179 ~~Ag~~~v~v~~g~~~~~~l~~~~~d~vi~~~~el~~~l~  218 (220)
T COG0546         179 KAAGVPAVGVTWGYNSREELAQAGADVVIDSLAELLALLA  218 (220)
T ss_pred             HHcCCCEEEEECCCCCCcchhhcCCCEEECCHHHHHHHHh
Confidence            99999999998865      25779999999999988764

>TIGR03351 PhnX-like phosphonatase-like hydrolase

Probab=99.93  E-value=2.1e-24  Score=189.34  Aligned_cols=196  Identities=16%  Similarity=0.202  Sum_probs=144.3

Q ss_pred             ccEEEEeCCCCccCCCccHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHhCCCHHHH-HHcc--CCCChhh------
Q 022360           14 YDCLLFDLDDTLYPYSSGIAAACGQNIKDYMVEKLGIERSKIEDLGNLLYKNYGTTMAGL-RAIG--YDFDYDD------   84 (298)
Q Consensus        14 ~k~viFDlDGTL~d~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~-~~~~--~~~~~~~------   84 (298)
                      +|+|+|||||||+++.+.+..++...+     ++.|.+....+...    ...|.+.... ..+.  ...+...      
T Consensus         1 ~k~iiFD~DGTL~ds~~~~~~~~~~~~-----~~~g~~~~~~~~~~----~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~   71 (220)
T TIGR03351         1 ISLVVLDMAGTTVDEDGLVYRALRQAV-----TAAGLSPTPEEVQS----AWMGQSKIEAIRALLALDGADEAEAQAAFA   71 (220)
T ss_pred             CcEEEEecCCCeeccCchHHHHHHHHH-----HHcCCCCCHHHHHH----hhcCCCHHHHHHHHHhccCCCHHHHHHHHH
Confidence            589999999999999988888887643     44566543321111    0234333322 1111  0111111      


Q ss_pred             -HHHHhhcccCCCCCCCChhHHHHHHhCC---CcEEEEeCCChHHHHHHHHHhCCC--CccceeEeecCCCCCCCCCCCC
Q 022360           85 -YHSFVHGRLPYENLKPDPVLRSLLLSLP---LRKIIFTNADKVHAVKVLSRLGLE--DCFEGIICFETLNPTHKNTVSD  158 (298)
Q Consensus        85 -~~~~~~~~~~~~~~~~~~g~~~~L~~l~---~~~~ivS~~~~~~~~~~l~~l~l~--~~f~~i~~~~~~~~~~~~~~~~  158 (298)
                       +.+.+.+........++||+.++|+.|+   ++++|+||+....++..++++++.  .+|+.++++++.+.        
T Consensus        72 ~~~~~~~~~~~~~~~~l~~G~~~~L~~L~~~g~~~~ivT~~~~~~~~~~l~~~~l~~~~~f~~i~~~~~~~~--------  143 (220)
T TIGR03351        72 DFEERLAEAYDDGPPVALPGAEEAFRSLRSSGIKVALTTGFDRDTAERLLEKLGWTVGDDVDAVVCPSDVAA--------  143 (220)
T ss_pred             HHHHHHHHHhcccCCccCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHhhhhhhccCCEEEcCCcCCC--------
Confidence             2222222111234578999999999984   679999999999999999999998  99999999987664        


Q ss_pred             ChhhHHHHHhhhcccCCCCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCC-CCcEEEEcCCccchH
Q 022360          159 DEDDIAFVESAASTTTSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASIN-PQRTLFFEDSVRNIQ  237 (298)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~-p~~~i~iGDs~~Di~  237 (298)
                                                                    .||+|+++..+++++++. |++|++|||+.+|++
T Consensus       144 ----------------------------------------------~KP~p~~~~~a~~~~~~~~~~~~~~igD~~~Di~  177 (220)
T TIGR03351       144 ----------------------------------------------GRPAPDLILRAMELTGVQDVQSVAVAGDTPNDLE  177 (220)
T ss_pred             ----------------------------------------------CCCCHHHHHHHHHHcCCCChhHeEEeCCCHHHHH
Confidence                                                          799999999999999997 799999999999999


Q ss_pred             HHHHcCCeE-EEecCCCC------CCCCCEEeCCHHHHHHHh
Q 022360          238 AGKRVGLDT-VLIGKSQR------VKGADYAFESIHNIKEAI  272 (298)
Q Consensus       238 ~a~~aG~~~-v~v~~~~~------~~~ad~i~~s~~~l~~~l  272 (298)
                      +|+++|+.+ +++.++..      ...++++++++.+|...+
T Consensus       178 aa~~aG~~~~i~~~~g~~~~~~~~~~~~~~~i~~~~~l~~~~  219 (220)
T TIGR03351       178 AGINAGAGAVVGVLTGAHDAEELSRHPHTHVLDSVADLPALL  219 (220)
T ss_pred             HHHHCCCCeEEEEecCCCcHHHHhhcCCceeecCHHHHHHhh
Confidence            999999999 88876542      457899999999987654

This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the

>PRK13226 phosphoglycolate phosphatase; Provisional

Probab=99.93  E-value=6.6e-25  Score=194.42  Aligned_cols=196  Identities=21%  Similarity=0.183  Sum_probs=143.2

Q ss_pred             CccEEEEeCCCCccCCCccHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHhCCCHHHHHH-ccCCCCh-------hh
Q 022360           13 KYDCLLFDLDDTLYPYSSGIAAACGQNIKDYMVEKLGIERSKIEDLGNLLYKNYGTTMAGLRA-IGYDFDY-------DD   84 (298)
Q Consensus        13 ~~k~viFDlDGTL~d~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~-------~~   84 (298)
                      ++++|+|||||||+|+...+..++..     ..+++|.+....+...    ...|........ .......       ..
T Consensus        11 ~~k~viFD~DGTL~Ds~~~~~~a~~~-----~~~~~g~~~~~~~~~~----~~~g~~~~~~~~~~~~~~~~~~~~~~~~~   81 (229)
T PRK13226         11 FPRAVLFDLDGTLLDSAPDMLATVNA-----MLAARGRAPITLAQLR----PVVSKGARAMLAVAFPELDAAARDALIPE   81 (229)
T ss_pred             cCCEEEEcCcCccccCHHHHHHHHHH-----HHHHCCCCCCCHHHHH----HHhhhHHHHHHHHHhccCChHHHHHHHHH
Confidence            36899999999999998888777775     4455665432222211    112222222211 1111111       12


Q ss_pred             HHHHhhcccCCCCCCCChhHHHHHHhCC---CcEEEEeCCChHHHHHHHHHhCCCCccceeEeecCCCCCCCCCCCCChh
Q 022360           85 YHSFVHGRLPYENLKPDPVLRSLLLSLP---LRKIIFTNADKVHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSDDED  161 (298)
Q Consensus        85 ~~~~~~~~~~~~~~~~~~g~~~~L~~l~---~~~~ivS~~~~~~~~~~l~~l~l~~~f~~i~~~~~~~~~~~~~~~~~~~  161 (298)
                      +.+.+.... .....++||+.++|+.|+   ++++|+||+....+...++++++..+|+.++++++.+.           
T Consensus        82 ~~~~~~~~~-~~~~~~~pg~~~~L~~L~~~g~~l~i~Tn~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~-----------  149 (229)
T PRK13226         82 FLQRYEALI-GTQSQLFDGVEGMLQRLECAGCVWGIVTNKPEYLARLILPQLGWEQRCAVLIGGDTLAE-----------  149 (229)
T ss_pred             HHHHHHHhh-hhcCeeCCCHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCchhcccEEEecCcCCC-----------
Confidence            222222211 134678999999999884   67899999999989999999999999998888776553           


Q ss_pred             hHHHHHhhhcccCCCCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHH
Q 022360          162 DIAFVESAASTTTSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKR  241 (298)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a~~  241 (298)
                                                                 .||+|+.+.++++++|++|++|++|||+.+|+++|++
T Consensus       150 -------------------------------------------~KP~p~~~~~~~~~l~~~p~~~l~IGDs~~Di~aA~~  186 (229)
T PRK13226        150 -------------------------------------------RKPHPLPLLVAAERIGVAPTDCVYVGDDERDILAARA  186 (229)
T ss_pred             -------------------------------------------CCCCHHHHHHHHHHhCCChhhEEEeCCCHHHHHHHHH
Confidence                                                       7999999999999999999999999999999999999


Q ss_pred             cCCeEEEecCCCC-------CCCCCEEeCCHHHHHHHh
Q 022360          242 VGLDTVLIGKSQR-------VKGADYAFESIHNIKEAI  272 (298)
Q Consensus       242 aG~~~v~v~~~~~-------~~~ad~i~~s~~~l~~~l  272 (298)
                      +|+.++++.++..       ...++++++++.+|.+.+
T Consensus       187 aG~~~i~v~~g~~~~~~~~~~~~~~~~i~~~~el~~~~  224 (229)
T PRK13226        187 AGMPSVAALWGYRLHDDDPLAWQADVLVEQPQLLWNPA  224 (229)
T ss_pred             CCCcEEEEeecCCCCCcChhhcCCCeeeCCHHHHHHHh
Confidence            9999999977642       346999999999987654

>PRK10826 2-deoxyglucose-6-phosphatase; Provisional

Probab=99.92  E-value=8.5e-25  Score=192.47  Aligned_cols=198  Identities=18%  Similarity=0.189  Sum_probs=146.2

Q ss_pred             ccccCccEEEEeCCCCccCCCccHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHhCCCHHHHH-----HccC-CCCh
Q 022360            9 MAAAKYDCLLFDLDDTLYPYSSGIAAACGQNIKDYMVEKLGIERSKIEDLGNLLYKNYGTTMAGLR-----AIGY-DFDY   82 (298)
Q Consensus         9 ~~~~~~k~viFDlDGTL~d~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~-----~~~~-~~~~   82 (298)
                      |++.++++|+||+||||+|+...+..++.+     +.++.|.+......+    ....|.......     .... ....
T Consensus         2 ~~~~~~k~iiFD~DGTL~d~~~~~~~a~~~-----~~~~~g~~~~~~~~~----~~~~g~~~~~~~~~~~~~~~~~~~~~   72 (222)
T PRK10826          2 STPRQILAAIFDMDGLLIDSEPLWDRAELD-----VMASLGVDISRREEL----PDTLGLRIDQVVDLWYARQPWNGPSR   72 (222)
T ss_pred             CCcccCcEEEEcCCCCCCcCHHHHHHHHHH-----HHHHCCCCCCHHHHH----HHhhCCCHHHHHHHHHHhcCCCCCCH
Confidence            345568999999999999988777777664     445566654332221    222333322211     1111 1112


Q ss_pred             hhH----HHHhhcccCCCCCCCChhHHHHHHhCC---CcEEEEeCCChHHHHHHHHHhCCCCccceeEeecCCCCCCCCC
Q 022360           83 DDY----HSFVHGRLPYENLKPDPVLRSLLLSLP---LRKIIFTNADKVHAVKVLSRLGLEDCFEGIICFETLNPTHKNT  155 (298)
Q Consensus        83 ~~~----~~~~~~~~~~~~~~~~~g~~~~L~~l~---~~~~ivS~~~~~~~~~~l~~l~l~~~f~~i~~~~~~~~~~~~~  155 (298)
                      ..+    .+..... ......++||+.++|+.|+   ++++|+|++....++..++++++..+|+.++++++.+.     
T Consensus        73 ~~~~~~~~~~~~~~-~~~~~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~-----  146 (222)
T PRK10826         73 QEVVQRIIARVISL-IEETRPLLPGVREALALCKAQGLKIGLASASPLHMLEAVLTMFDLRDYFDALASAEKLPY-----  146 (222)
T ss_pred             HHHHHHHHHHHHHH-HhcCCCCCCCHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHhCcchhcccEEEEcccCCC-----
Confidence            221    1111111 1245788999999999884   78999999999999999999999999999999887664     


Q ss_pred             CCCChhhHHHHHhhhcccCCCCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccc
Q 022360          156 VSDDEDDIAFVESAASTTTSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRN  235 (298)
Q Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~D  235 (298)
                                                                       +||+|+.+..+++++|++|++|++|||+.+|
T Consensus       147 -------------------------------------------------~Kp~~~~~~~~~~~~~~~~~~~~~igDs~~D  177 (222)
T PRK10826        147 -------------------------------------------------SKPHPEVYLNCAAKLGVDPLTCVALEDSFNG  177 (222)
T ss_pred             -------------------------------------------------CCCCHHHHHHHHHHcCCCHHHeEEEcCChhh
Confidence                                                             7999999999999999999999999999999


Q ss_pred             hHHHHHcCCeEEEecCCCC-----CCCCCEEeCCHHHHHH
Q 022360          236 IQAGKRVGLDTVLIGKSQR-----VKGADYAFESIHNIKE  270 (298)
Q Consensus       236 i~~a~~aG~~~v~v~~~~~-----~~~ad~i~~s~~~l~~  270 (298)
                      +++|+++|+.++++..+..     ...+++++.++.+|..
T Consensus       178 i~aA~~aG~~~i~v~~~~~~~~~~~~~~~~~~~~~~dl~~  217 (222)
T PRK10826        178 MIAAKAARMRSIVVPAPEQQNDPRWALADVKLESLTELTA  217 (222)
T ss_pred             HHHHHHcCCEEEEecCCccCchhhhhhhheeccCHHHHhh
Confidence            9999999999999977643     3468999999999854

>TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253

Probab=99.92  E-value=2.6e-24  Score=188.65  Aligned_cols=198  Identities=25%  Similarity=0.350  Sum_probs=139.5

Q ss_pred             ccEEEEeCCCCccCCCccHHHHHHHHHHHHHHHHhCCChhH--HHHHHHHHHHHhCCC----HHH-HHHccCCCChhhHH
Q 022360           14 YDCLLFDLDDTLYPYSSGIAAACGQNIKDYMVEKLGIERSK--IEDLGNLLYKNYGTT----MAG-LRAIGYDFDYDDYH   86 (298)
Q Consensus        14 ~k~viFDlDGTL~d~~~~~~~~~~~~~~~~~~~~~g~~~~~--~~~~~~~~~~~~g~~----~~~-~~~~~~~~~~~~~~   86 (298)
                      +++|+||+||||+++.+.+..++....+.  ....|++...  ............+..    ... ....+.....+...
T Consensus         2 ~~~viFDlDGTL~ds~~~~~~~~~~~~~~--~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (221)
T TIGR02253         2 IKAIFFDLDDTLIDTSGLAEKARRNAIEV--LIEAGLNVDFEEAYEELLKLIKEYGSNYPTHFDYLIRRLWEEYNPKLVA   79 (221)
T ss_pred             ceEEEEeCCCCCcCCCCccCHHHHHHHHH--HHHCCCcCCHHHHHHHHHHHHHHhccccCcchHHHHHHHhhhcCHHHHH
Confidence            68999999999999988877776643332  2333443322  111111112222211    111 11111111111111


Q ss_pred             H---HhhcccCCCCCCCChhHHHHHHhCC---CcEEEEeCCChHHHHHHHHHhCCCCccceeEeecCCCCCCCCCCCCCh
Q 022360           87 S---FVHGRLPYENLKPDPVLRSLLLSLP---LRKIIFTNADKVHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSDDE  160 (298)
Q Consensus        87 ~---~~~~~~~~~~~~~~~g~~~~L~~l~---~~~~ivS~~~~~~~~~~l~~l~l~~~f~~i~~~~~~~~~~~~~~~~~~  160 (298)
                      .   ..... ....+.++||+.++|+.|+   ++++|+||+....+...++++++..+|+.++++++.+.          
T Consensus        80 ~~~~~~~~~-~~~~~~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~----------  148 (221)
T TIGR02253        80 AFVYAYHKL-KFAYLRVYPGVRDTLMELRESGYRLGIITDGLPVKQWEKLERLGVRDFFDAVITSEEEGV----------  148 (221)
T ss_pred             HHHHHHHHH-HHHhCCCCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHhCChHHhccEEEEeccCCC----------
Confidence            1   11111 1234688999999999884   67999999999999999999999999999999988775          


Q ss_pred             hhHHHHHhhhcccCCCCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCc-cchHHH
Q 022360          161 DDIAFVESAASTTTSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSV-RNIQAG  239 (298)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~p~~~i~iGDs~-~Di~~a  239 (298)
                                                                  .||+|+.|..+++++|++|++|++|||+. +|+.+|
T Consensus       149 --------------------------------------------~KP~~~~~~~~~~~~~~~~~~~~~igDs~~~di~~A  184 (221)
T TIGR02253       149 --------------------------------------------EKPHPKIFYAALKRLGVKPEEAVMVGDRLDKDIKGA  184 (221)
T ss_pred             --------------------------------------------CCCCHHHHHHHHHHcCCChhhEEEECCChHHHHHHH
Confidence                                                        79999999999999999999999999998 999999


Q ss_pred             HHcCCeEEEecCCCC-------CCCCCEEeCCHHHH
Q 022360          240 KRVGLDTVLIGKSQR-------VKGADYAFESIHNI  268 (298)
Q Consensus       240 ~~aG~~~v~v~~~~~-------~~~ad~i~~s~~~l  268 (298)
                      +++|+.++++.++..       ...+++++.++.+|
T Consensus       185 ~~aG~~~i~~~~~~~~~~~~~~~~~~~~~i~~~~el  220 (221)
T TIGR02253       185 KNLGMKTVWINQGKSSKMEDDVYPYPDYEISSLREL  220 (221)
T ss_pred             HHCCCEEEEECCCCCcccccccccCCCeeeCcHHhh
Confidence            999999999977543       24578999988775

This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549).

>PRK13478 phosphonoacetaldehyde hydrolase; Provisional

Probab=99.92  E-value=3.3e-24  Score=194.05  Aligned_cols=202  Identities=16%  Similarity=0.160  Sum_probs=144.5

Q ss_pred             ccCccEEEEeCCCCccCCCcc-HHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHhCCCHHH--------------H-H
Q 022360           11 AAKYDCLLFDLDDTLYPYSSG-IAAACGQNIKDYMVEKLGIERSKIEDLGNLLYKNYGTTMAG--------------L-R   74 (298)
Q Consensus        11 ~~~~k~viFDlDGTL~d~~~~-~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~--------------~-~   74 (298)
                      |+++|+|+|||||||+|+... +..++..     ..+.+|++.... .    +....|.....              + .
T Consensus         1 ~~~~k~vIFDlDGTLiDs~~~~~~~a~~~-----~~~~~g~~~~~~-~----~~~~~G~~~~~~~~~~~~~~~~~~~~~~   70 (267)
T PRK13478          1 MMKIQAVIFDWAGTTVDFGSFAPTQAFVE-----AFAQFGVEITLE-E----ARGPMGLGKWDHIRALLKMPRVAARWQA   70 (267)
T ss_pred             CCceEEEEEcCCCCeecCCCccHHHHHHH-----HHHHcCCCCCHH-H----HHHhcCCCHHHHHHHHHhcHHHHHHHHH
Confidence            345899999999999997543 3455554     334456543221 1    11222322110              0 1


Q ss_pred             HccCCCChhhH-------HHHhhcccCCCCCCCChhHHHHHHhCC---CcEEEEeCCChHHHHHHHHHhCCCCcc-ceeE
Q 022360           75 AIGYDFDYDDY-------HSFVHGRLPYENLKPDPVLRSLLLSLP---LRKIIFTNADKVHAVKVLSRLGLEDCF-EGII  143 (298)
Q Consensus        75 ~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~g~~~~L~~l~---~~~~ivS~~~~~~~~~~l~~l~l~~~f-~~i~  143 (298)
                      .++...+.+.+       ...+.+.. .....++||+.++|+.|+   ++++|+||.....+...++.+++.++| +.++
T Consensus        71 ~~g~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~pg~~elL~~L~~~g~~l~I~T~~~~~~~~~~l~~~~l~~~~~d~i~  149 (267)
T PRK13478         71 VFGRLPTEADVDALYAAFEPLQIAKL-ADYATPIPGVLEVIAALRARGIKIGSTTGYTREMMDVVVPLAAAQGYRPDHVV  149 (267)
T ss_pred             HhCCCCCHHHHHHHHHHHHHHHHHHH-hhcCCCCCCHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHHhhcCCCceEEE
Confidence            12222222211       11111111 245688999999999984   789999999999999999999988875 8888


Q ss_pred             eecCCCCCCCCCCCCChhhHHHHHhhhcccCCCCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCC-
Q 022360          144 CFETLNPTHKNTVSDDEDDIAFVESAASTTTSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASIN-  222 (298)
Q Consensus       144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~-  222 (298)
                      ++++.+.                                                      .||+|+.|..+++++|+. 
T Consensus       150 ~~~~~~~------------------------------------------------------~KP~p~~~~~a~~~l~~~~  175 (267)
T PRK13478        150 TTDDVPA------------------------------------------------------GRPYPWMALKNAIELGVYD  175 (267)
T ss_pred             cCCcCCC------------------------------------------------------CCCChHHHHHHHHHcCCCC
Confidence            8877654                                                      799999999999999996 


Q ss_pred             CCcEEEEcCCccchHHHHHcCCeEEEecCCCC-----------------------------CCCCCEEeCCHHHHHHHhH
Q 022360          223 PQRTLFFEDSVRNIQAGKRVGLDTVLIGKSQR-----------------------------VKGADYAFESIHNIKEAIP  273 (298)
Q Consensus       223 p~~~i~iGDs~~Di~~a~~aG~~~v~v~~~~~-----------------------------~~~ad~i~~s~~~l~~~l~  273 (298)
                      |++|++|||+.+|+++|+++|+.++++.++..                             ..+++++++|+.+|.+.|.
T Consensus       176 ~~e~l~IGDs~~Di~aA~~aG~~~i~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~a~~vi~~~~~l~~~l~  255 (267)
T PRK13478        176 VAACVKVDDTVPGIEEGLNAGMWTVGVILSGNELGLSEEEYQALSAAELAARRERARARLRAAGAHYVIDTIADLPAVIA  255 (267)
T ss_pred             CcceEEEcCcHHHHHHHHHCCCEEEEEccCcccccCCHHHHHhcCHHHHHHHHHHHHHHHHHcCCCeehhhHHHHHHHHH
Confidence            69999999999999999999999999977642                             4679999999999998887


Q ss_pred             Hhhc
Q 022360          274 ELWE  277 (298)
Q Consensus       274 ~~~~  277 (298)
                      .+..
T Consensus       256 ~~~~  259 (267)
T PRK13478        256 DIEA  259 (267)
T ss_pred             HHHH
Confidence            6654

>TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase

Probab=99.92  E-value=3.4e-24  Score=192.31  Aligned_cols=194  Identities=16%  Similarity=0.165  Sum_probs=140.3

Q ss_pred             ccEEEEeCCCCccCCCcc-HHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHhCCCHHH---------------HHHcc
Q 022360           14 YDCLLFDLDDTLYPYSSG-IAAACGQNIKDYMVEKLGIERSKIEDLGNLLYKNYGTTMAG---------------LRAIG   77 (298)
Q Consensus        14 ~k~viFDlDGTL~d~~~~-~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~---------------~~~~~   77 (298)
                      +++|+|||||||+|+... +..++...     .++.|++.... .    +....|.+...               ...++
T Consensus         2 ~k~viFD~DGTLiDs~~~~~~~a~~~~-----~~~~g~~~~~~-~----~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~   71 (253)
T TIGR01422         2 IEAVIFDWAGTTVDFGSFAPTQAFVEA-----FAEFGVQITLE-E----ARGPMGLGKWDHIRALLKMPAVAERWRAKFG   71 (253)
T ss_pred             ceEEEEeCCCCeecCCCccHHHHHHHH-----HHHcCCCccHH-H----HHHhcCccHHHHHHHHhcCHHHHHHHHHHhC
Confidence            689999999999997543 45555543     34456543221 1    11122222110               11222


Q ss_pred             CCCChhh-------HHHHhhcccCCCCCCCChhHHHHHHhCC---CcEEEEeCCChHHHHHHHHHhCCCCcc-ceeEeec
Q 022360           78 YDFDYDD-------YHSFVHGRLPYENLKPDPVLRSLLLSLP---LRKIIFTNADKVHAVKVLSRLGLEDCF-EGIICFE  146 (298)
Q Consensus        78 ~~~~~~~-------~~~~~~~~~~~~~~~~~~g~~~~L~~l~---~~~~ivS~~~~~~~~~~l~~l~l~~~f-~~i~~~~  146 (298)
                      ...+.+.       +...+.... .....++||+.++|+.|+   ++++|+||+....++..++++++..+| +.+++++
T Consensus        72 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~pg~~e~L~~L~~~g~~l~IvT~~~~~~~~~~l~~~gl~~~f~d~ii~~~  150 (253)
T TIGR01422        72 RLPTEADIEAIYEAFEPLQLAKL-AEYSSPIPGVIEVIAYLRARGIKIGSTTGYTREMMDVVAPEAALQGYRPDYNVTTD  150 (253)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHH-HhcCccCCCHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHHHHhcCCCCceEEccc
Confidence            2222222       221111111 245788999999999884   789999999999999999999999986 8899888


Q ss_pred             CCCCCCCCCCCCChhhHHHHHhhhcccCCCCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCC-CCc
Q 022360          147 TLNPTHKNTVSDDEDDIAFVESAASTTTSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASIN-PQR  225 (298)
Q Consensus       147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~-p~~  225 (298)
                      +++.                                                      .||+|+.+..+++++|+. |++
T Consensus       151 ~~~~------------------------------------------------------~KP~p~~~~~a~~~l~~~~~~~  176 (253)
T TIGR01422       151 DVPA------------------------------------------------------GRPAPWMALKNAIELGVYDVAA  176 (253)
T ss_pred             cCCC------------------------------------------------------CCCCHHHHHHHHHHcCCCCchh
Confidence            7664                                                      799999999999999995 999


Q ss_pred             EEEEcCCccchHHHHHcCCeEEEecCCCC-----------------------------CCCCCEEeCCHHHHHHHh
Q 022360          226 TLFFEDSVRNIQAGKRVGLDTVLIGKSQR-----------------------------VKGADYAFESIHNIKEAI  272 (298)
Q Consensus       226 ~i~iGDs~~Di~~a~~aG~~~v~v~~~~~-----------------------------~~~ad~i~~s~~~l~~~l  272 (298)
                      |++|||+.+|+++|+++|+.++++.++..                             ..+|+++++++.+|.++|
T Consensus       177 ~l~IGDs~~Di~aA~~aGi~~i~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~v~~~~~el~~~~  252 (253)
T TIGR01422       177 CVKVGDTVPDIEEGRNAGMWTVGLILSSNELGLSEEEYRALDPAELEARRAEATARLKAAGAHYVIDTLAELPAVI  252 (253)
T ss_pred             eEEECCcHHHHHHHHHCCCeEEEEecCCcccCCCHHHHHhCCHHHHHHHHHHHHHHHHhcCCCEehhcHHHHHHhh
Confidence            99999999999999999999999977642                             357999999999987764

This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent.

>PRK10563 6-phosphogluconate phosphatase; Provisional

Probab=99.92  E-value=8.6e-25  Score=192.09  Aligned_cols=198  Identities=17%  Similarity=0.227  Sum_probs=141.9

Q ss_pred             cCccEEEEeCCCCccCCCccHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHhCCCHHHH-----HHccCCCChhhHH
Q 022360           12 AKYDCLLFDLDDTLYPYSSGIAAACGQNIKDYMVEKLGIERSKIEDLGNLLYKNYGTTMAGL-----RAIGYDFDYDDYH   86 (298)
Q Consensus        12 ~~~k~viFDlDGTL~d~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~-----~~~~~~~~~~~~~   86 (298)
                      +++++|+||+||||+|+...+..++..     ..++.|++....+ ...   ...|.+....     ...+...+.+.+.
T Consensus         2 ~~~~~viFD~DGTL~d~~~~~~~a~~~-----~~~~~g~~~~~~~-~~~---~~~g~~~~~~~~~~~~~~~~~~~~~~~~   72 (221)
T PRK10563          2 SQIEAVFFDCDGTLVDSEVICSRAYVT-----MFAEFGITLSLEE-VFK---RFKGVKLYEIIDIISKEHGVTLAKAELE   72 (221)
T ss_pred             CCCCEEEECCCCCCCCChHHHHHHHHH-----HHHHcCCCCCHHH-HHH---HhcCCCHHHHHHHHHHHhCCCCCHHHHH
Confidence            358999999999999987777777664     3445676543211 111   1122222211     2234444444443


Q ss_pred             HHhhcc---cCCCCCCCChhHHHHHHhCCCcEEEEeCCChHHHHHHHHHhCCCCccc-eeEeecCCCCCCCCCCCCChhh
Q 022360           87 SFVHGR---LPYENLKPDPVLRSLLLSLPLRKIIFTNADKVHAVKVLSRLGLEDCFE-GIICFETLNPTHKNTVSDDEDD  162 (298)
Q Consensus        87 ~~~~~~---~~~~~~~~~~g~~~~L~~l~~~~~ivS~~~~~~~~~~l~~l~l~~~f~-~i~~~~~~~~~~~~~~~~~~~~  162 (298)
                      ..+...   .......++||+.++|+.|+++++|+||+....+...++++++.++|+ .++++++.+.            
T Consensus        73 ~~~~~~~~~~~~~~~~~~~gv~~~L~~L~~~~~ivTn~~~~~~~~~l~~~~l~~~F~~~v~~~~~~~~------------  140 (221)
T PRK10563         73 PVYRAEVARLFDSELEPIAGANALLESITVPMCVVSNGPVSKMQHSLGKTGMLHYFPDKLFSGYDIQR------------  140 (221)
T ss_pred             HHHHHHHHHHHHccCCcCCCHHHHHHHcCCCEEEEeCCcHHHHHHHHHhcChHHhCcceEeeHHhcCC------------
Confidence            332211   112457889999999999999999999999999999999999999996 5667766664            


Q ss_pred             HHHHHhhhcccCCCCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHHc
Q 022360          163 IAFVESAASTTTSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRV  242 (298)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a~~a  242 (298)
                                                                .||+|+.|..+++++|++|++|++|||+.+||++|+++
T Consensus       141 ------------------------------------------~KP~p~~~~~a~~~~~~~p~~~l~igDs~~di~aA~~a  178 (221)
T PRK10563        141 ------------------------------------------WKPDPALMFHAAEAMNVNVENCILVDDSSAGAQSGIAA  178 (221)
T ss_pred             ------------------------------------------CCCChHHHHHHHHHcCCCHHHeEEEeCcHhhHHHHHHC
Confidence                                                      79999999999999999999999999999999999999


Q ss_pred             CCeEEEecCCCC----CCCCCEEeCCHHHHHHHh
Q 022360          243 GLDTVLIGKSQR----VKGADYAFESIHNIKEAI  272 (298)
Q Consensus       243 G~~~v~v~~~~~----~~~ad~i~~s~~~l~~~l  272 (298)
                      |+.++++..+..    ...++.++.++.+|.+.+
T Consensus       179 G~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~  212 (221)
T PRK10563        179 GMEVFYFCADPHNKPIDHPLVTTFTDLAQLPELW  212 (221)
T ss_pred             CCEEEEECCCCCCcchhhhhhHHHHHHHHHHHHH
Confidence            999998854321    223445566776666544

>PLN03243 haloacid dehalogenase-like hydrolase; Provisional

Probab=99.92  E-value=2.3e-24  Score=194.47  Aligned_cols=204  Identities=12%  Similarity=0.138  Sum_probs=148.4

Q ss_pred             cCccEEEEeCCCCccCCCcc-HHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHhCCCHHHHH-Hc-cCCCChh---hH
Q 022360           12 AKYDCLLFDLDDTLYPYSSG-IAAACGQNIKDYMVEKLGIERSKIEDLGNLLYKNYGTTMAGLR-AI-GYDFDYD---DY   85 (298)
Q Consensus        12 ~~~k~viFDlDGTL~d~~~~-~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~-~~-~~~~~~~---~~   85 (298)
                      ..+|+|||||||||+|+... +..++..     +.+.+|+.....+.    .....|.+..... .+ ....+.+   .+
T Consensus        22 ~~~k~vIFDlDGTLvDS~~~~~~~a~~~-----~~~~~G~~~~~~e~----~~~~~G~~~~~~~~~l~~~~~~~~~~~~l   92 (260)
T PLN03243         22 CGWLGVVLEWEGVIVEDDSELERKAWRA-----LAEEEGKRPPPAFL----LKRAEGMKNEQAISEVLCWSRDFLQMKRL   92 (260)
T ss_pred             CCceEEEEeCCCceeCCchHHHHHHHHH-----HHHHcCCCCCHHHH----HHHhcCCCHHHHHHHHhccCCCHHHHHHH
Confidence            45899999999999998644 4456664     45556776433211    1223344433221 11 1111111   11


Q ss_pred             HHHhhc---ccCCCCCCCChhHHHHHHhCC---CcEEEEeCCChHHHHHHHHHhCCCCccceeEeecCCCCCCCCCCCCC
Q 022360           86 HSFVHG---RLPYENLKPDPVLRSLLLSLP---LRKIIFTNADKVHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSDD  159 (298)
Q Consensus        86 ~~~~~~---~~~~~~~~~~~g~~~~L~~l~---~~~~ivS~~~~~~~~~~l~~l~l~~~f~~i~~~~~~~~~~~~~~~~~  159 (298)
                      ......   ........++||+.++|+.|+   ++++|+||+....++..++++++..+|+.++++++...         
T Consensus        93 ~~~~~~~~~~~~~~~~~l~pg~~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~~Fd~ii~~~d~~~---------  163 (260)
T PLN03243         93 AIRKEDLYEYMQGGLYRLRPGSREFVQALKKHEIPIAVASTRPRRYLERAIEAVGMEGFFSVVLAAEDVYR---------  163 (260)
T ss_pred             HHHHHHHHHHHHccCcccCCCHHHHHHHHHHCCCEEEEEeCcCHHHHHHHHHHcCCHhhCcEEEecccCCC---------
Confidence            111111   111134678999999999985   78999999999999999999999999999999988764         


Q ss_pred             hhhHHHHHhhhcccCCCCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccchHHH
Q 022360          160 EDDIAFVESAASTTTSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAG  239 (298)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a  239 (298)
                                                                   +||+|++|..+++++|++|++|++|||+.+|+++|
T Consensus       164 ---------------------------------------------~KP~Pe~~~~a~~~l~~~p~~~l~IgDs~~Di~aA  198 (260)
T PLN03243        164 ---------------------------------------------GKPDPEMFMYAAERLGFIPERCIVFGNSNSSVEAA  198 (260)
T ss_pred             ---------------------------------------------CCCCHHHHHHHHHHhCCChHHeEEEcCCHHHHHHH
Confidence                                                         79999999999999999999999999999999999


Q ss_pred             HHcCCeEEEecCCC---CCCCCCEEeCCHHHHHHHhHHhhcc
Q 022360          240 KRVGLDTVLIGKSQ---RVKGADYAFESIHNIKEAIPELWES  278 (298)
Q Consensus       240 ~~aG~~~v~v~~~~---~~~~ad~i~~s~~~l~~~l~~~~~~  278 (298)
                      +++|+.++++....   ....++++++++++|...+..-++.
T Consensus       199 ~~aG~~~i~v~g~~~~~~l~~ad~vi~~~~el~~~~~~~~~~  240 (260)
T PLN03243        199 HDGCMKCVAVAGKHPVYELSAGDLVVRRLDDLSVVDLKNLSD  240 (260)
T ss_pred             HHcCCEEEEEecCCchhhhccCCEEeCCHHHHHHHHHhhhhc
Confidence            99999999885322   2346899999999998777666554

>TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein

Probab=99.92  E-value=5.8e-24  Score=184.84  Aligned_cols=193  Identities=18%  Similarity=0.268  Sum_probs=144.5

Q ss_pred             EEEeCCCCccCCCccHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHhCCCHHHH-HHccCCCCh-hhHHHHhhcccC
Q 022360           17 LLFDLDDTLYPYSSGIAAACGQNIKDYMVEKLGIERSKIEDLGNLLYKNYGTTMAGL-RAIGYDFDY-DDYHSFVHGRLP   94 (298)
Q Consensus        17 viFDlDGTL~d~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~-~~~~~~~~~-~~~~~~~~~~~~   94 (298)
                      |+|||||||+|+.+.+..++...+.+    ..|.+....+    .+....|...... ..++.+... ..+......  .
T Consensus         1 iiFDlDGTL~Ds~~~~~~~~~~~~~~----~~~~~~~~~~----~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~--~   70 (205)
T TIGR01454         1 VVFDLDGVLVDSFAVMREAFAIAYRE----VVGDGPAPFE----EYRRHLGRYFPDIMRIMGLPLEMEEPFVRESYR--L   70 (205)
T ss_pred             CeecCcCccccCHHHHHHHHHHHHHH----hcCCCCCCHH----HHHHHhCccHHHHHHHcCCCHHHHHHHHHHHHH--h
Confidence            68999999999988888887764332    2344221111    1223344444333 223322111 112111111  1


Q ss_pred             CCCCCCChhHHHHHHhCC---CcEEEEeCCChHHHHHHHHHhCCCCccceeEeecCCCCCCCCCCCCChhhHHHHHhhhc
Q 022360           95 YENLKPDPVLRSLLLSLP---LRKIIFTNADKVHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSDDEDDIAFVESAAS  171 (298)
Q Consensus        95 ~~~~~~~~g~~~~L~~l~---~~~~ivS~~~~~~~~~~l~~l~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  171 (298)
                      .....++||+.++|++|+   ++++|+||+....++..++++++.++|+.++++++.+.                     
T Consensus        71 ~~~~~~~~g~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~---------------------  129 (205)
T TIGR01454        71 AGEVEVFPGVPELLAELRADGVGTAIATGKSGPRARSLLEALGLLPLFDHVIGSDEVPR---------------------  129 (205)
T ss_pred             hcccccCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHcCChhheeeEEecCcCCC---------------------
Confidence            245788999999999884   78999999999999999999999999999998887654                     


Q ss_pred             ccCCCCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHHcCCeEEEecC
Q 022360          172 TTTSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTVLIGK  251 (298)
Q Consensus       172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a~~aG~~~v~v~~  251 (298)
                                                       +||+|..+..++++++++|++|++|||+.+|+.+|+++|+.++++.+
T Consensus       130 ---------------------------------~KP~~~~~~~~~~~~~~~~~~~l~igD~~~Di~aA~~~Gi~~i~~~~  176 (205)
T TIGR01454       130 ---------------------------------PKPAPDIVREALRLLDVPPEDAVMVGDAVTDLASARAAGTATVAALW  176 (205)
T ss_pred             ---------------------------------CCCChHHHHHHHHHcCCChhheEEEcCCHHHHHHHHHcCCeEEEEEe
Confidence                                             79999999999999999999999999999999999999999999977


Q ss_pred             CCC------CCCCCEEeCCHHHHHHHhH
Q 022360          252 SQR------VKGADYAFESIHNIKEAIP  273 (298)
Q Consensus       252 ~~~------~~~ad~i~~s~~~l~~~l~  273 (298)
                      +..      ...++++++++.+|.++++
T Consensus       177 g~~~~~~l~~~~~~~~~~~~~~l~~~~~  204 (205)
T TIGR01454       177 GEGDAGELLAARPDFLLRKPQSLLALCR  204 (205)
T ss_pred             cCCChhhhhhcCCCeeeCCHHHHHHHhh
Confidence            652      4579999999999988765

The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity.

>PRK11587 putative phosphatase; Provisional

Probab=99.92  E-value=7.9e-24  Score=185.98  Aligned_cols=192  Identities=19%  Similarity=0.214  Sum_probs=139.0

Q ss_pred             cCccEEEEeCCCCccCCCccHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHhCCCHHH-HHHccCCCChhhHHHHhh
Q 022360           12 AKYDCLLFDLDDTLYPYSSGIAAACGQNIKDYMVEKLGIERSKIEDLGNLLYKNYGTTMAG-LRAIGYDFDYDDYHSFVH   90 (298)
Q Consensus        12 ~~~k~viFDlDGTL~d~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~~~   90 (298)
                      |++++|+|||||||+|+...+..++.+     ..++.|++....   ..   ...|.+... +..+....+.+.+.+.+.
T Consensus         1 M~~k~viFDlDGTL~Ds~~~~~~a~~~-----~~~~~g~~~~~~---~~---~~~g~~~~~~~~~~~~~~~~~~~~~~~~   69 (218)
T PRK11587          1 MRCKGFLFDLDGTLVDSLPAVERAWSN-----WADRHGIAPDEV---LN---FIHGKQAITSLRHFMAGASEAEIQAEFT   69 (218)
T ss_pred             CCCCEEEEcCCCCcCcCHHHHHHHHHH-----HHHHcCCCHHHH---HH---HHcCCCHHHHHHHHhccCCcHHHHHHHH
Confidence            357999999999999998888888775     445567754221   11   112333322 122221122222221111


Q ss_pred             -----cccCCCCCCCChhHHHHHHhCC---CcEEEEeCCChHHHHHHHHHhCCCCccceeEeecCCCCCCCCCCCCChhh
Q 022360           91 -----GRLPYENLKPDPVLRSLLLSLP---LRKIIFTNADKVHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSDDEDD  162 (298)
Q Consensus        91 -----~~~~~~~~~~~~g~~~~L~~l~---~~~~ivS~~~~~~~~~~l~~l~l~~~f~~i~~~~~~~~~~~~~~~~~~~~  162 (298)
                           .........++||+.++|+.|+   ++++|+||+........++..++ .+|+.+++.++...            
T Consensus        70 ~~~~~~~~~~~~~~~~pg~~e~L~~L~~~g~~~~ivTn~~~~~~~~~l~~~~l-~~~~~i~~~~~~~~------------  136 (218)
T PRK11587         70 RLEQIEATDTEGITALPGAIALLNHLNKLGIPWAIVTSGSVPVASARHKAAGL-PAPEVFVTAERVKR------------  136 (218)
T ss_pred             HHHHHHHhhhcCceeCcCHHHHHHHHHHcCCcEEEEcCCCchHHHHHHHhcCC-CCccEEEEHHHhcC------------
Confidence                 1111245678999999998884   78999999988888888888888 46778887776543            


Q ss_pred             HHHHHhhhcccCCCCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHHc
Q 022360          163 IAFVESAASTTTSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRV  242 (298)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a~~a  242 (298)
                                                                .||+|+.+..+++++|++|++|++|||+.+|+++|+++
T Consensus       137 ------------------------------------------~KP~p~~~~~~~~~~g~~p~~~l~igDs~~di~aA~~a  174 (218)
T PRK11587        137 ------------------------------------------GKPEPDAYLLGAQLLGLAPQECVVVEDAPAGVLSGLAA  174 (218)
T ss_pred             ------------------------------------------CCCCcHHHHHHHHHcCCCcccEEEEecchhhhHHHHHC
Confidence                                                      69999999999999999999999999999999999999


Q ss_pred             CCeEEEecCCCC---CCCCCEEeCCHHHHH
Q 022360          243 GLDTVLIGKSQR---VKGADYAFESIHNIK  269 (298)
Q Consensus       243 G~~~v~v~~~~~---~~~ad~i~~s~~~l~  269 (298)
                      |+.++++.++..   ...++++++++.+|.
T Consensus       175 G~~~i~v~~~~~~~~~~~~~~~~~~~~el~  204 (218)
T PRK11587        175 GCHVIAVNAPADTPRLDEVDLVLHSLEQLT  204 (218)
T ss_pred             CCEEEEECCCCchhhhccCCEEecchhhee
Confidence            999999976542   456899999998874

>TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic

Probab=99.92  E-value=5e-24  Score=185.69  Aligned_cols=191  Identities=26%  Similarity=0.308  Sum_probs=140.3

Q ss_pred             EEEeCCCCccCCCccHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHhCCCHHHH-----HHccCCCChh---h----
Q 022360           17 LLFDLDDTLYPYSSGIAAACGQNIKDYMVEKLGIERSKIEDLGNLLYKNYGTTMAGL-----RAIGYDFDYD---D----   84 (298)
Q Consensus        17 viFDlDGTL~d~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~-----~~~~~~~~~~---~----   84 (298)
                      |+|||||||+|+...+..++..     ..++.|.+.......    ....|......     ...+...+.+   .    
T Consensus         1 viFD~DGTL~Ds~~~~~~~~~~-----~~~~~~~~~~~~~~~----~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   71 (213)
T TIGR01449         1 VLFDLDGTLVDSAPDIAAAVNM-----ALAALGLPPATLARV----IGFIGNGVPVLMERVLAWAGQEPDAQRVAELRKL   71 (213)
T ss_pred             CeecCCCccccCHHHHHHHHHH-----HHHHCCCCCCCHHHH----HHHhcccHHHHHHHHhhccccccChHHHHHHHHH
Confidence            6999999999987777766664     344566643222221    12233332211     1112222211   1    


Q ss_pred             HHHHhhcccCCCCCCCChhHHHHHHhCC---CcEEEEeCCChHHHHHHHHHhCCCCccceeEeecCCCCCCCCCCCCChh
Q 022360           85 YHSFVHGRLPYENLKPDPVLRSLLLSLP---LRKIIFTNADKVHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSDDED  161 (298)
Q Consensus        85 ~~~~~~~~~~~~~~~~~~g~~~~L~~l~---~~~~ivS~~~~~~~~~~l~~l~l~~~f~~i~~~~~~~~~~~~~~~~~~~  161 (298)
                      +...+... ......++||+.++|+.|+   ++++|+|++....++..++++++..+|+.++++++.+.           
T Consensus        72 ~~~~~~~~-~~~~~~~~~g~~~~L~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~-----------  139 (213)
T TIGR01449        72 FDRHYEEV-AGELTSVFPGVEATLGALRAKGLRLGLVTNKPTPLARPLLELLGLAKYFSVLIGGDSLAQ-----------  139 (213)
T ss_pred             HHHHHHHh-ccccCccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCcHhhCcEEEecCCCCC-----------
Confidence            22222221 1234678999999999885   68999999999999999999999999999998887654           


Q ss_pred             hHHHHHhhhcccCCCCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHH
Q 022360          162 DIAFVESAASTTTSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKR  241 (298)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a~~  241 (298)
                                                                 .||+|+.+..+++++|++|++|++|||+.+|+++|++
T Consensus       140 -------------------------------------------~Kp~p~~~~~~~~~~~~~~~~~~~igDs~~d~~aa~~  176 (213)
T TIGR01449       140 -------------------------------------------RKPHPDPLLLAAERLGVAPQQMVYVGDSRVDIQAARA  176 (213)
T ss_pred             -------------------------------------------CCCChHHHHHHHHHcCCChhHeEEeCCCHHHHHHHHH
Confidence                                                       7999999999999999999999999999999999999


Q ss_pred             cCCeEEEecCCCC------CCCCCEEeCCHHHHHHH
Q 022360          242 VGLDTVLIGKSQR------VKGADYAFESIHNIKEA  271 (298)
Q Consensus       242 aG~~~v~v~~~~~------~~~ad~i~~s~~~l~~~  271 (298)
                      +|+.++++.++..      ...++++++++.+|..+
T Consensus       177 aG~~~i~v~~g~~~~~~l~~~~a~~~i~~~~~l~~~  212 (213)
T TIGR01449       177 AGCPSVLLTYGYRYGEAIDLLPPDVLYDSLNELPPL  212 (213)
T ss_pred             CCCeEEEEccCCCCCcchhhcCCCeEeCCHHHHHhh
Confidence            9999999976542      35789999999998764

This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702).

>PLN02575 haloacid dehalogenase-like hydrolase

Probab=99.92  E-value=6.7e-24  Score=199.16  Aligned_cols=210  Identities=11%  Similarity=0.133  Sum_probs=153.0

Q ss_pred             CccEEEEeCCCCccCCCccHH-HHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHhCCCHHHHH-Hcc-CCCChh---hH-
Q 022360           13 KYDCLLFDLDDTLYPYSSGIA-AACGQNIKDYMVEKLGIERSKIEDLGNLLYKNYGTTMAGLR-AIG-YDFDYD---DY-   85 (298)
Q Consensus        13 ~~k~viFDlDGTL~d~~~~~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~-~~~-~~~~~~---~~-   85 (298)
                      .+++|||||||||+|+...+. .++..     +.++.|++......    .....|.+..... .+. ...+..   .+ 
T Consensus       130 ~~~~VIFDlDGTLIDS~~~i~~~a~~~-----l~~e~G~~~~~~e~----~~~~~G~~~~~~l~~ll~~~~~~~~~e~l~  200 (381)
T PLN02575        130 GWLGAIFEWEGVIIEDNPDLENQAWLT-----LAQEEGKSPPPAFI----LRRVEGMKNEQAISEVLCWSRDPAELRRMA  200 (381)
T ss_pred             CCCEEEEcCcCcceeCHHHHHHHHHHH-----HHHHcCCCCCHHHH----HHHhcCCCHHHHHHHHhhccCCHHHHHHHH
Confidence            589999999999999877444 45553     45566775443221    2233455443321 111 111111   11 


Q ss_pred             ---HHHhhcccCCCCCCCChhHHHHHHhCC---CcEEEEeCCChHHHHHHHHHhCCCCccceeEeecCCCCCCCCCCCCC
Q 022360           86 ---HSFVHGRLPYENLKPDPVLRSLLLSLP---LRKIIFTNADKVHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSDD  159 (298)
Q Consensus        86 ---~~~~~~~~~~~~~~~~~g~~~~L~~l~---~~~~ivS~~~~~~~~~~l~~l~l~~~f~~i~~~~~~~~~~~~~~~~~  159 (298)
                         ...+... ......++||+.++|+.|+   ++++|+|++....++..++++|+.+||+.+++++++..         
T Consensus       201 ~~~~~~y~~~-~~~~~~l~pGa~ElL~~Lk~~GiklaIaSn~~~~~~~~~L~~lgL~~yFd~Iv~sddv~~---------  270 (381)
T PLN02575        201 TRKEEIYQAL-QGGIYRLRTGSQEFVNVLMNYKIPMALVSTRPRKTLENAIGSIGIRGFFSVIVAAEDVYR---------  270 (381)
T ss_pred             HHHHHHHHHH-hccCCCcCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCHHHceEEEecCcCCC---------
Confidence               2222111 1134678999999999984   78999999999999999999999999999999988764         


Q ss_pred             hhhHHHHHhhhcccCCCCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccchHHH
Q 022360          160 EDDIAFVESAASTTTSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAG  239 (298)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a  239 (298)
                                                                   .||+|++|..+++++|++|++|++|||+.+||++|
T Consensus       271 ---------------------------------------------~KP~Peifl~A~~~lgl~Peecl~IGDS~~DIeAA  305 (381)
T PLN02575        271 ---------------------------------------------GKPDPEMFIYAAQLLNFIPERCIVFGNSNQTVEAA  305 (381)
T ss_pred             ---------------------------------------------CCCCHHHHHHHHHHcCCCcccEEEEcCCHHHHHHH
Confidence                                                         79999999999999999999999999999999999


Q ss_pred             HHcCCeEEEecCCCC---CCCCCEEeCCHHHHHHHhHHhhccCcccccCC
Q 022360          240 KRVGLDTVLIGKSQR---VKGADYAFESIHNIKEAIPELWESDMKSEVGY  286 (298)
Q Consensus       240 ~~aG~~~v~v~~~~~---~~~ad~i~~s~~~l~~~l~~~~~~~~~~~~~~  286 (298)
                      +++|+.++++.++..   ...++++++++.+|.-..-+-+.....++.|.
T Consensus       306 k~AGm~~IgV~~~~~~~~l~~Ad~iI~s~~EL~~~~l~~l~~~~~~~~~~  355 (381)
T PLN02575        306 HDARMKCVAVASKHPIYELGAADLVVRRLDELSIVDLKNLADIESPEFGP  355 (381)
T ss_pred             HHcCCEEEEECCCCChhHhcCCCEEECCHHHHHHHHHhhhhhcCccccCC
Confidence            999999999976542   34589999999998654445444444455555

>PRK13222 phosphoglycolate phosphatase; Provisional

Probab=99.91  E-value=2e-23  Score=183.43  Aligned_cols=202  Identities=21%  Similarity=0.252  Sum_probs=148.0

Q ss_pred             ccccCccEEEEeCCCCccCCCccHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHhCCCHHHHH-----HccCCCChh
Q 022360            9 MAAAKYDCLLFDLDDTLYPYSSGIAAACGQNIKDYMVEKLGIERSKIEDLGNLLYKNYGTTMAGLR-----AIGYDFDYD   83 (298)
Q Consensus         9 ~~~~~~k~viFDlDGTL~d~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~-----~~~~~~~~~   83 (298)
                      |+.+++++|+||+||||+++...+..++..     +.+..|.+......+.    ...|.....+.     ..+...+.+
T Consensus         1 ~~~~~~~~iiFD~DGTL~d~~~~~~~~~~~-----~~~~~~~~~~~~~~~~----~~~g~~~~~~~~~~~~~~~~~~~~~   71 (226)
T PRK13222          1 MKFMDIRAVAFDLDGTLVDSAPDLAAAVNA-----ALAALGLPPAGEERVR----TWVGNGADVLVERALTWAGREPDEE   71 (226)
T ss_pred             CCCCcCcEEEEcCCcccccCHHHHHHHHHH-----HHHHCCCCCCCHHHHH----HHhCccHHHHHHHHHhhccCCccHH
Confidence            566779999999999999987766666654     3444566432222221    12232222211     111122222


Q ss_pred             hH-------HHHhhcccCCCCCCCChhHHHHHHhCC---CcEEEEeCCChHHHHHHHHHhCCCCccceeEeecCCCCCCC
Q 022360           84 DY-------HSFVHGRLPYENLKPDPVLRSLLLSLP---LRKIIFTNADKVHAVKVLSRLGLEDCFEGIICFETLNPTHK  153 (298)
Q Consensus        84 ~~-------~~~~~~~~~~~~~~~~~g~~~~L~~l~---~~~~ivS~~~~~~~~~~l~~l~l~~~f~~i~~~~~~~~~~~  153 (298)
                      .+       ...+.... .....++||+.++|+.++   ++++++|++....++..++++++..+|+.+++.++.+.   
T Consensus        72 ~~~~~~~~~~~~~~~~~-~~~~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~---  147 (226)
T PRK13222         72 LLEKLRELFDRHYAENV-AGGSRLYPGVKETLAALKAAGYPLAVVTNKPTPFVAPLLEALGIADYFSVVIGGDSLPN---  147 (226)
T ss_pred             HHHHHHHHHHHHHHHhc-cccCccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCccCccEEEcCCCCCC---
Confidence            22       22222211 124678999999999885   67899999999999999999999999999888776554   


Q ss_pred             CCCCCChhhHHHHHhhhcccCCCCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCc
Q 022360          154 NTVSDDEDDIAFVESAASTTTSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSV  233 (298)
Q Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~p~~~i~iGDs~  233 (298)
                                                                         .||+|+++..++++++++|++|++|||+.
T Consensus       148 ---------------------------------------------------~kp~~~~~~~~~~~~~~~~~~~i~igD~~  176 (226)
T PRK13222        148 ---------------------------------------------------KKPDPAPLLLACEKLGLDPEEMLFVGDSR  176 (226)
T ss_pred             ---------------------------------------------------CCcChHHHHHHHHHcCCChhheEEECCCH
Confidence                                                               69999999999999999999999999999


Q ss_pred             cchHHHHHcCCeEEEecCCCC------CCCCCEEeCCHHHHHHHhHH
Q 022360          234 RNIQAGKRVGLDTVLIGKSQR------VKGADYAFESIHNIKEAIPE  274 (298)
Q Consensus       234 ~Di~~a~~aG~~~v~v~~~~~------~~~ad~i~~s~~~l~~~l~~  274 (298)
                      +|+++|+++|+.++++.++..      ...+++++.++.+|..+|.+
T Consensus       177 ~Di~~a~~~g~~~i~v~~g~~~~~~~~~~~~~~~i~~~~~l~~~l~~  223 (226)
T PRK13222        177 NDIQAARAAGCPSVGVTYGYNYGEPIALSEPDVVIDHFAELLPLLGL  223 (226)
T ss_pred             HHHHHHHHCCCcEEEECcCCCCccchhhcCCCEEECCHHHHHHHHHH
Confidence            999999999999999977643      34689999999999988765

>TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254

Probab=99.91  E-value=2.4e-23  Score=182.52  Aligned_cols=199  Identities=26%  Similarity=0.320  Sum_probs=143.0

Q ss_pred             ccEEEEeCCCCccCCCccHHHHHHHHHHHHHHHHhCCChhHHH--H---HHHHHHHHh--CC-CHHH---------HHHc
Q 022360           14 YDCLLFDLDDTLYPYSSGIAAACGQNIKDYMVEKLGIERSKIE--D---LGNLLYKNY--GT-TMAG---------LRAI   76 (298)
Q Consensus        14 ~k~viFDlDGTL~d~~~~~~~~~~~~~~~~~~~~~g~~~~~~~--~---~~~~~~~~~--g~-~~~~---------~~~~   76 (298)
                      +|+|+||+||||+|+...+..++.+.     .++.|++.....  .   .....+..+  +. ....         ....
T Consensus         1 ~k~viFD~DGTL~d~~~~~~~~~~~~-----~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   75 (224)
T TIGR02254         1 YKTLLFDLDDTILDFQAAEALALRLL-----FEDQGIPLTEDMFAQYKEINQGLWRAYEEGKITKDEVVNTRFSALLKEY   75 (224)
T ss_pred             CCEEEEcCcCcccccchHHHHHHHHH-----HHHhCCCccHHHHHHHHHHhHHHHHHHHcCCCCHHHHHHHHHHHHHHHh
Confidence            58999999999999888777666643     334555432111  0   011112222  11 1110         1122


Q ss_pred             cCCCChhhHHHHhhcccCCCCCCCChhHHHHHHhCC--CcEEEEeCCChHHHHHHHHHhCCCCccceeEeecCCCCCCCC
Q 022360           77 GYDFDYDDYHSFVHGRLPYENLKPDPVLRSLLLSLP--LRKIIFTNADKVHAVKVLSRLGLEDCFEGIICFETLNPTHKN  154 (298)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~L~~l~--~~~~ivS~~~~~~~~~~l~~l~l~~~f~~i~~~~~~~~~~~~  154 (298)
                      +.....+.+.+.+.... .....++||+.++|+.++  .+++|+||+....++..++.+++..+|+.++++++.+.    
T Consensus        76 ~~~~~~~~~~~~~~~~~-~~~~~~~~g~~~~L~~l~~~~~~~i~Sn~~~~~~~~~l~~~~l~~~fd~i~~~~~~~~----  150 (224)
T TIGR02254        76 NTEADEALLNQKYLRFL-EEGHQLLPGAFELMENLQQKFRLYIVTNGVRETQYKRLRKSGLFPFFDDIFVSEDAGI----  150 (224)
T ss_pred             CCCCcHHHHHHHHHHHH-hccCeeCccHHHHHHHHHhcCcEEEEeCCchHHHHHHHHHCCcHhhcCEEEEcCccCC----
Confidence            22222222333222211 134578999999999886  67899999999999999999999999999999987765    


Q ss_pred             CCCCChhhHHHHHhhhcccCCCCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHc-CCCCCcEEEEcCCc
Q 022360          155 TVSDDEDDIAFVESAASTTTSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIA-SINPQRTLFFEDSV  233 (298)
Q Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l-~i~p~~~i~iGDs~  233 (298)
                                                                        .||+|.++.++++++ +++|++|++|||+.
T Consensus       151 --------------------------------------------------~KP~~~~~~~~~~~~~~~~~~~~v~igD~~  180 (224)
T TIGR02254       151 --------------------------------------------------QKPDKEIFNYALERMPKFSKEEVLMIGDSL  180 (224)
T ss_pred             --------------------------------------------------CCCCHHHHHHHHHHhcCCCchheEEECCCc
Confidence                                                              799999999999999 99999999999998


Q ss_pred             -cchHHHHHcCCeEEEecCCC----CCCCCCEEeCCHHHHHHHh
Q 022360          234 -RNIQAGKRVGLDTVLIGKSQ----RVKGADYAFESIHNIKEAI  272 (298)
Q Consensus       234 -~Di~~a~~aG~~~v~v~~~~----~~~~ad~i~~s~~~l~~~l  272 (298)
                       +|+++|+++|+.++++.++.    ....+++++.++.+|.++|
T Consensus       181 ~~di~~A~~~G~~~i~~~~~~~~~~~~~~~~~~~~~~~el~~~~  224 (224)
T TIGR02254       181 TADIKGGQNAGLDTCWMNPDMHPNPDDIIPTYEIRSLEELYEIL  224 (224)
T ss_pred             HHHHHHHHHCCCcEEEECCCCCCCCCCCCCceEECCHHHHHhhC
Confidence             89999999999999997653    2346789999999988764

This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases.

>PRK13225 phosphoglycolate phosphatase; Provisional

Probab=99.91  E-value=5.7e-23  Score=186.63  Aligned_cols=197  Identities=18%  Similarity=0.245  Sum_probs=145.7

Q ss_pred             CccEEEEeCCCCccCCCccHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHhCCCHHHH-HHccCCC-Ch----hhHH
Q 022360           13 KYDCLLFDLDDTLYPYSSGIAAACGQNIKDYMVEKLGIERSKIEDLGNLLYKNYGTTMAGL-RAIGYDF-DY----DDYH   86 (298)
Q Consensus        13 ~~k~viFDlDGTL~d~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~-~~~~~~~-~~----~~~~   86 (298)
                      ++++++|||||||+|+.+.+..++..     ..+++|++....+..    ....+...... ...+.+. ..    ..+.
T Consensus        61 ~~k~vIFDlDGTLiDS~~~~~~a~~~-----~~~~~G~~~~~~~~~----~~~~g~~~~~i~~~~~~~~~~~~~~~~~~~  131 (273)
T PRK13225         61 TLQAIIFDFDGTLVDSLPTVVAIANA-----HAPDFGYDPIDERDY----AQLRQWSSRTIVRRAGLSPWQQARLLQRVQ  131 (273)
T ss_pred             hcCEEEECCcCccccCHHHHHHHHHH-----HHHHCCCCCCCHHHH----HHHhCccHHHHHHHcCCCHHHHHHHHHHHH
Confidence            58999999999999988888777775     445566643222111    11122222222 2222210 11    1222


Q ss_pred             HHhhcccCCCCCCCChhHHHHHHhCC---CcEEEEeCCChHHHHHHHHHhCCCCccceeEeecCCCCCCCCCCCCChhhH
Q 022360           87 SFVHGRLPYENLKPDPVLRSLLLSLP---LRKIIFTNADKVHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSDDEDDI  163 (298)
Q Consensus        87 ~~~~~~~~~~~~~~~~g~~~~L~~l~---~~~~ivS~~~~~~~~~~l~~l~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~  163 (298)
                      +.+..  ......++||+.++|+.|+   ++++|+|++....++..++++|+.++|+.+++.++.               
T Consensus       132 ~~~~~--~~~~~~l~pg~~e~L~~L~~~gi~laIvSn~~~~~~~~~L~~~gl~~~F~~vi~~~~~---------------  194 (273)
T PRK13225        132 RQLGD--CLPALQLFPGVADLLAQLRSRSLCLGILSSNSRQNIEAFLQRQGLRSLFSVVQAGTPI---------------  194 (273)
T ss_pred             HHHHh--hcccCCcCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCChhheEEEEecCCC---------------
Confidence            22222  1345788999999999985   789999999999999999999999999988765432               


Q ss_pred             HHHHhhhcccCCCCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHHcC
Q 022360          164 AFVESAASTTTSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVG  243 (298)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a~~aG  243 (298)
                                                                ++++..+..++++++++|++|++|||+.+|+++|+++|
T Consensus       195 ------------------------------------------~~k~~~~~~~l~~~~~~p~~~l~IGDs~~Di~aA~~AG  232 (273)
T PRK13225        195 ------------------------------------------LSKRRALSQLVAREGWQPAAVMYVGDETRDVEAARQVG  232 (273)
T ss_pred             ------------------------------------------CCCHHHHHHHHHHhCcChhHEEEECCCHHHHHHHHHCC
Confidence                                                      34568899999999999999999999999999999999


Q ss_pred             CeEEEecCCCC------CCCCCEEeCCHHHHHHHhHHhhc
Q 022360          244 LDTVLIGKSQR------VKGADYAFESIHNIKEAIPELWE  277 (298)
Q Consensus       244 ~~~v~v~~~~~------~~~ad~i~~s~~~l~~~l~~~~~  277 (298)
                      +.++++.++..      ...|+++++++.+|.+++.++++
T Consensus       233 ~~~I~v~~g~~~~~~l~~~~ad~~i~~~~eL~~~~~~~~~  272 (273)
T PRK13225        233 LIAVAVTWGFNDRQSLVAACPDWLLETPSDLLQAVTQLMR  272 (273)
T ss_pred             CeEEEEecCCCCHHHHHHCCCCEEECCHHHHHHHHHHHhc
Confidence            99999987643      45799999999999999888764

>PRK14988 GMP/IMP nucleotidase; Provisional

Probab=99.91  E-value=5.9e-23  Score=181.45  Aligned_cols=202  Identities=18%  Similarity=0.224  Sum_probs=140.5

Q ss_pred             CccEEEEeCCCCccCCCccHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHhCCC-----HHHH-HHccCCCChhhHH
Q 022360           13 KYDCLLFDLDDTLYPYSSGIAAACGQNIKDYMVEKLGIERSKIEDLGNLLYKNYGTT-----MAGL-RAIGYDFDYDDYH   86 (298)
Q Consensus        13 ~~k~viFDlDGTL~d~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~-----~~~~-~~~~~~~~~~~~~   86 (298)
                      ++|+|||||||||+|+... ...+.....+.+.+..|.+...........+......     ...+ ...+..  ...+.
T Consensus         9 ~~k~vIFDlDGTL~d~~~~-~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~   85 (224)
T PRK14988          9 DVDTVLLDMDGTLLDLAFD-NYFWQKLVPETLGAQRGISPQEAQEYIRQEYHAVQHTLNWYCLDYWSERLGLD--ICAMT   85 (224)
T ss_pred             cCCEEEEcCCCCccchhhh-chHHHhhHHHHHHHHhCcCHHHHHHHHHHHHHHHcCccceecHHHHHHHhCCC--HHHHH
Confidence            4789999999999995311 2233333333455677776543322211111111111     1111 111111  11111


Q ss_pred             HHhhcccCCCCCCCChhHHHHHHhCC---CcEEEEeCCChHHHHHHHHHhCCCCccceeEeecCCCCCCCCCCCCChhhH
Q 022360           87 SFVHGRLPYENLKPDPVLRSLLLSLP---LRKIIFTNADKVHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSDDEDDI  163 (298)
Q Consensus        87 ~~~~~~~~~~~~~~~~g~~~~L~~l~---~~~~ivS~~~~~~~~~~l~~l~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~  163 (298)
                      .   .  ......++||+.++|+.|+   ++++|+||+....++..++++++.++|+.++++++.+.             
T Consensus        86 ~---~--~~~~~~~~~g~~e~L~~Lk~~g~~~~i~Tn~~~~~~~~~l~~~~l~~~fd~iv~s~~~~~-------------  147 (224)
T PRK14988         86 T---E--QGPRAVLREDTVPFLEALKASGKRRILLTNAHPHNLAVKLEHTGLDAHLDLLLSTHTFGY-------------  147 (224)
T ss_pred             H---H--HhccCCcCCCHHHHHHHHHhCCCeEEEEeCcCHHHHHHHHHHCCcHHHCCEEEEeeeCCC-------------
Confidence            1   1  1244788999999999985   67999999999999999999999999999999988765             


Q ss_pred             HHHHhhhcccCCCCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHHcC
Q 022360          164 AFVESAASTTTSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVG  243 (298)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a~~aG  243 (298)
                                                               .||+|+.|..+++++|++|++|++|||+.+|+++|+++|
T Consensus       148 -----------------------------------------~KP~p~~~~~~~~~~~~~p~~~l~igDs~~di~aA~~aG  186 (224)
T PRK14988        148 -----------------------------------------PKEDQRLWQAVAEHTGLKAERTLFIDDSEPILDAAAQFG  186 (224)
T ss_pred             -----------------------------------------CCCCHHHHHHHHHHcCCChHHEEEEcCCHHHHHHHHHcC
Confidence                                                     799999999999999999999999999999999999999


Q ss_pred             CeE-EEecCCCC--CCCCCEEeCCHHHHHHHhHHhh
Q 022360          244 LDT-VLIGKSQR--VKGADYAFESIHNIKEAIPELW  276 (298)
Q Consensus       244 ~~~-v~v~~~~~--~~~ad~i~~s~~~l~~~l~~~~  276 (298)
                      +.+ +++..+..  ...+.....+++++.+++..+.
T Consensus       187 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  222 (224)
T PRK14988        187 IRYCLGVTNPDSGIAEKQYQRHPSLNDYRRLIPSLM  222 (224)
T ss_pred             CeEEEEEeCCCCCccchhccCCCcHHHHHHHhhhhc
Confidence            985 56655443  3456667788888888777653

>PRK09449 dUMP phosphatase; Provisional

Probab=99.91  E-value=9.1e-23  Score=179.48  Aligned_cols=123  Identities=24%  Similarity=0.304  Sum_probs=108.3

Q ss_pred             CCCCChhHHHHHHhCC--CcEEEEeCCChHHHHHHHHHhCCCCccceeEeecCCCCCCCCCCCCChhhHHHHHhhhcccC
Q 022360           97 NLKPDPVLRSLLLSLP--LRKIIFTNADKVHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSDDEDDIAFVESAASTTT  174 (298)
Q Consensus        97 ~~~~~~g~~~~L~~l~--~~~~ivS~~~~~~~~~~l~~l~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  174 (298)
                      ...++||+.++|+.|+  ++++|+||+....++..++++|+.++|+.++++++.+.                        
T Consensus        93 ~~~~~~g~~~~L~~L~~~~~~~i~Tn~~~~~~~~~l~~~~l~~~fd~v~~~~~~~~------------------------  148 (224)
T PRK09449         93 ICTPLPGAVELLNALRGKVKMGIITNGFTELQQVRLERTGLRDYFDLLVISEQVGV------------------------  148 (224)
T ss_pred             cCccCccHHHHHHHHHhCCeEEEEeCCcHHHHHHHHHhCChHHHcCEEEEECccCC------------------------
Confidence            3678999999999986  77899999999999999999999999999999988775                        


Q ss_pred             CCCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCC-CCcEEEEcCCc-cchHHHHHcCCeEEEecCC
Q 022360          175 SANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASIN-PQRTLFFEDSV-RNIQAGKRVGLDTVLIGKS  252 (298)
Q Consensus       175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~-p~~~i~iGDs~-~Di~~a~~aG~~~v~v~~~  252 (298)
                                                    .||+|++|..+++++|+. +++|++|||+. +|+++|+++|+.++++.++
T Consensus       149 ------------------------------~KP~p~~~~~~~~~~~~~~~~~~~~vgD~~~~Di~~A~~aG~~~i~~~~~  198 (224)
T PRK09449        149 ------------------------------AKPDVAIFDYALEQMGNPDRSRVLMVGDNLHSDILGGINAGIDTCWLNAH  198 (224)
T ss_pred             ------------------------------CCCCHHHHHHHHHHcCCCCcccEEEEcCCcHHHHHHHHHCCCcEEEECCC
Confidence                                          799999999999999985 47899999998 7999999999999999643


Q ss_pred             -CC---CCCCCEEeCCHHHHHHHhH
Q 022360          253 -QR---VKGADYAFESIHNIKEAIP  273 (298)
Q Consensus       253 -~~---~~~ad~i~~s~~~l~~~l~  273 (298)
                       ..   ...+++++.++.+|.+++.
T Consensus       199 ~~~~~~~~~~~~~i~~~~el~~~l~  223 (224)
T PRK09449        199 GREQPEGIAPTYQVSSLSELEQLLC  223 (224)
T ss_pred             CCCCCCCCCCeEEECCHHHHHHHHh
Confidence             21   2458999999999988764

>PRK13223 phosphoglycolate phosphatase; Provisional

Probab=99.90  E-value=1.9e-22  Score=183.29  Aligned_cols=199  Identities=22%  Similarity=0.265  Sum_probs=145.5

Q ss_pred             CccEEEEeCCCCccCCCccHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHhCCCHHHHHH-c-c-----CCCCh---
Q 022360           13 KYDCLLFDLDDTLYPYSSGIAAACGQNIKDYMVEKLGIERSKIEDLGNLLYKNYGTTMAGLRA-I-G-----YDFDY---   82 (298)
Q Consensus        13 ~~k~viFDlDGTL~d~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~-~-~-----~~~~~---   82 (298)
                      .+|+|+|||||||+|+.+.+..++..     +.+..|.+.......    ....|.....+.. . .     ...+.   
T Consensus        12 ~~k~viFDlDGTL~Ds~~~~~~a~~~-----~~~~~g~~~~~~~~~----~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~   82 (272)
T PRK13223         12 LPRLVMFDLDGTLVDSVPDLAAAVDR-----MLLELGRPPAGLEAV----RHWVGNGAPVLVRRALAGSIDHDGVDDELA   82 (272)
T ss_pred             cCCEEEEcCCCccccCHHHHHHHHHH-----HHHHcCCCCCCHHHH----HHHhChhHHHHHHHHhcccccccCCCHHHH
Confidence            36899999999999988887777764     455667654332221    1222333222211 0 0     01111   


Q ss_pred             hhHHHHhhccc--CCCCCCCChhHHHHHHhCC---CcEEEEeCCChHHHHHHHHHhCCCCccceeEeecCCCCCCCCCCC
Q 022360           83 DDYHSFVHGRL--PYENLKPDPVLRSLLLSLP---LRKIIFTNADKVHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVS  157 (298)
Q Consensus        83 ~~~~~~~~~~~--~~~~~~~~~g~~~~L~~l~---~~~~ivS~~~~~~~~~~l~~l~l~~~f~~i~~~~~~~~~~~~~~~  157 (298)
                      +.+...+.+..  ......++||+.++|+.|+   ++++|+||+....++..++++++..+|+.++++++.+.       
T Consensus        83 ~~~~~~~~~~~~~~~~~~~~~~g~~e~L~~Lk~~g~~l~ivTn~~~~~~~~~l~~~~i~~~f~~i~~~d~~~~-------  155 (272)
T PRK13223         83 EQALALFMEAYADSHELTVVYPGVRDTLKWLKKQGVEMALITNKPERFVAPLLDQMKIGRYFRWIIGGDTLPQ-------  155 (272)
T ss_pred             HHHHHHHHHHHHhcCcCCccCCCHHHHHHHHHHCCCeEEEEECCcHHHHHHHHHHcCcHhhCeEEEecCCCCC-------
Confidence            11112111111  1134578999999999884   68999999999999999999999999999988876653       


Q ss_pred             CChhhHHHHHhhhcccCCCCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccchH
Q 022360          158 DDEDDIAFVESAASTTTSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQ  237 (298)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~  237 (298)
                                                                     .||+|+.++.+++++|++|++|++|||+.+|++
T Consensus       156 -----------------------------------------------~Kp~p~~~~~~~~~~g~~~~~~l~IGD~~~Di~  188 (272)
T PRK13223        156 -----------------------------------------------KKPDPAALLFVMKMAGVPPSQSLFVGDSRSDVL  188 (272)
T ss_pred             -----------------------------------------------CCCCcHHHHHHHHHhCCChhHEEEECCCHHHHH
Confidence                                                           699999999999999999999999999999999


Q ss_pred             HHHHcCCeEEEecCCCC------CCCCCEEeCCHHHHHHHhHH
Q 022360          238 AGKRVGLDTVLIGKSQR------VKGADYAFESIHNIKEAIPE  274 (298)
Q Consensus       238 ~a~~aG~~~v~v~~~~~------~~~ad~i~~s~~~l~~~l~~  274 (298)
                      +|+++|+.++++.++..      ...++++++++.+|.+.+..
T Consensus       189 aA~~aGi~~i~v~~G~~~~~~l~~~~~~~vi~~l~el~~~~~~  231 (272)
T PRK13223        189 AAKAAGVQCVALSYGYNHGRPIAEESPALVIDDLRALLPGCAD  231 (272)
T ss_pred             HHHHCCCeEEEEecCCCCchhhhhcCCCEEECCHHHHHHHHhc
Confidence            99999999999977642      35799999999999876553

>COG1011 Predicted hydrolase (HAD superfamily) [General function prediction only]

Probab=99.90  E-value=8.1e-23  Score=179.74  Aligned_cols=124  Identities=27%  Similarity=0.428  Sum_probs=113.8

Q ss_pred             CCCCChhHHHHHHhCCCc--EEEEeCCChHHHHHHHHHhCCCCccceeEeecCCCCCCCCCCCCChhhHHHHHhhhcccC
Q 022360           97 NLKPDPVLRSLLLSLPLR--KIIFTNADKVHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSDDEDDIAFVESAASTTT  174 (298)
Q Consensus        97 ~~~~~~g~~~~L~~l~~~--~~ivS~~~~~~~~~~l~~l~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  174 (298)
                      ..+++|++.++|+.++.+  ++|+||+....+...++++|+.++||.++++++.+.                        
T Consensus        97 ~~~~~~~~~~~L~~l~~~~~l~ilTNg~~~~~~~~l~~~gl~~~Fd~v~~s~~~g~------------------------  152 (229)
T COG1011          97 LLPDYPEALEALKELGKKYKLGILTNGARPHQERKLRQLGLLDYFDAVFISEDVGV------------------------  152 (229)
T ss_pred             hCccChhHHHHHHHHHhhccEEEEeCCChHHHHHHHHHcCChhhhheEEEeccccc------------------------
Confidence            478999999999999865  999999999999999999999999999999999986                        


Q ss_pred             CCCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCc-cchHHHHHcCCeEEEecCCC
Q 022360          175 SANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSV-RNIQAGKRVGLDTVLIGKSQ  253 (298)
Q Consensus       175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~p~~~i~iGDs~-~Di~~a~~aG~~~v~v~~~~  253 (298)
                                                    .||+|.+|+.+++++|++|++|++|||+. |||.+|+++||.++++..+.
T Consensus       153 ------------------------------~KP~~~~f~~~~~~~g~~p~~~l~VgD~~~~di~gA~~~G~~~vwi~~~~  202 (229)
T COG1011         153 ------------------------------AKPDPEIFEYALEKLGVPPEEALFVGDSLENDILGARALGMKTVWINRGG  202 (229)
T ss_pred             ------------------------------CCCCcHHHHHHHHHcCCCcceEEEECCChhhhhHHHHhcCcEEEEECCCC
Confidence                                          79999999999999999999999999998 88899999999999997765


Q ss_pred             C-----CCCCCEEeCCHHHHHHHhHH
Q 022360          254 R-----VKGADYAFESIHNIKEAIPE  274 (298)
Q Consensus       254 ~-----~~~ad~i~~s~~~l~~~l~~  274 (298)
                      .     ...+++.+.++.+|.+.+..
T Consensus       203 ~~~~~~~~~~~~~i~~l~~l~~~~~~  228 (229)
T COG1011         203 KPLPDALEAPDYEISSLAELLDLLER  228 (229)
T ss_pred             CCCCCCccCCceEEcCHHHHHHHHhh
Confidence            3     25789999999999988764

>COG0637 Predicted phosphatase/phosphohexomutase [General function prediction only]

Probab=99.90  E-value=5.7e-23  Score=181.21  Aligned_cols=196  Identities=26%  Similarity=0.328  Sum_probs=142.4

Q ss_pred             CccEEEEeCCCCccCCCccHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHhCCC----HHHHHHccCC---CChhhH
Q 022360           13 KYDCLLFDLDDTLYPYSSGIAAACGQNIKDYMVEKLGIERSKIEDLGNLLYKNYGTT----MAGLRAIGYD---FDYDDY   85 (298)
Q Consensus        13 ~~k~viFDlDGTL~d~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~----~~~~~~~~~~---~~~~~~   85 (298)
                      ++++|||||||||+|+...+..+|.+     +.+++|+.......     ....|..    ...+......   .+....
T Consensus         1 ~~~avIFD~DGvLvDse~~~~~a~~~-----~~~~~g~~~~~~~~-----~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~   70 (221)
T COG0637           1 MIKAVIFDMDGTLVDSEPLHARAWLE-----ALKEYGIEISDEEI-----RELHGGGIARIIDLLRKLAAGEDPADLAEL   70 (221)
T ss_pred             CCcEEEEcCCCCcCcchHHHHHHHHH-----HHHHcCCCCCHHHH-----HHHHCCChHHHHHHHHHHhcCCcccCHHHH
Confidence            37899999999999998888888886     45557876544211     2222321    1111111111   111111


Q ss_pred             HHHhh--cccCCCCCCCChhHHHHHHhCC---CcEEEEeCCChHHHHHHHHHhCCCCccceeEeecCCCCCCCCCCCCCh
Q 022360           86 HSFVH--GRLPYENLKPDPVLRSLLLSLP---LRKIIFTNADKVHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSDDE  160 (298)
Q Consensus        86 ~~~~~--~~~~~~~~~~~~g~~~~L~~l~---~~~~ivS~~~~~~~~~~l~~l~l~~~f~~i~~~~~~~~~~~~~~~~~~  160 (298)
                      .....  .........+.||+.++|+.|+   +++++.|++....++..++.+|+.++|+.+++++++..          
T Consensus        71 ~~~~~~~~~~~~~~~~~~pGv~~~l~~L~~~~i~~avaS~s~~~~~~~~L~~~gl~~~f~~~v~~~dv~~----------  140 (221)
T COG0637          71 ERLLYEAEALELEGLKPIPGVVELLEQLKARGIPLAVASSSPRRAAERVLARLGLLDYFDVIVTADDVAR----------  140 (221)
T ss_pred             HHHHHHHHHhhhcCCCCCccHHHHHHHHHhcCCcEEEecCChHHHHHHHHHHccChhhcchhccHHHHhc----------
Confidence            11111  1112356899999999999997   77889999999999999999999999999999987764          


Q ss_pred             hhHHHHHhhhcccCCCCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccchHHHH
Q 022360          161 DDIAFVESAASTTTSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGK  240 (298)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a~  240 (298)
                                                                  +||+|+.|..+++++|++|++|++|+|+.++|++|+
T Consensus       141 --------------------------------------------~KP~Pd~yL~Aa~~Lgv~P~~CvviEDs~~Gi~Aa~  176 (221)
T COG0637         141 --------------------------------------------GKPAPDIYLLAAERLGVDPEECVVVEDSPAGIQAAK  176 (221)
T ss_pred             --------------------------------------------CCCCCHHHHHHHHHcCCChHHeEEEecchhHHHHHH
Confidence                                                        799999999999999999999999999999999999


Q ss_pred             HcCCeEEEecCCCC--------CCCCCEEeCCHHHHHHHh
Q 022360          241 RVGLDTVLIGKSQR--------VKGADYAFESIHNIKEAI  272 (298)
Q Consensus       241 ~aG~~~v~v~~~~~--------~~~ad~i~~s~~~l~~~l  272 (298)
                      ++||.++.+..+..        ...++....++.++...+
T Consensus       177 aAGm~vv~v~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~  216 (221)
T COG0637         177 AAGMRVVGVPAGHDRPHLDPLDAHGADTVLLDLAELPALL  216 (221)
T ss_pred             HCCCEEEEecCCCCccccchhhhhhcchhhccHHHHHHHH
Confidence            99999999976433        234455555555555444

>PRK10725 fructose-1-P/6-phosphogluconate phosphatase; Provisional

Probab=99.90  E-value=4.9e-23  Score=176.17  Aligned_cols=174  Identities=18%  Similarity=0.304  Sum_probs=127.3

Q ss_pred             cCccEEEEeCCCCccCCCccHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHhCCCHHHH-----HHccCCCChhhHH
Q 022360           12 AKYDCLLFDLDDTLYPYSSGIAAACGQNIKDYMVEKLGIERSKIEDLGNLLYKNYGTTMAGL-----RAIGYDFDYDDYH   86 (298)
Q Consensus        12 ~~~k~viFDlDGTL~d~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~-----~~~~~~~~~~~~~   86 (298)
                      .++++|+|||||||+|+...+..++...     .++.|++....     ......|.+....     ...+...+.+.+.
T Consensus         3 ~~~~~viFD~DGTLiDs~~~~~~a~~~~-----~~~~g~~~~~~-----~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~   72 (188)
T PRK10725          3 DRYAGLIFDMDGTILDTEPTHRKAWREV-----LGRYGLQFDEQ-----AMVALNGSPTWRIAQAIIELNQADLDPHALA   72 (188)
T ss_pred             CcceEEEEcCCCcCccCHHHHHHHHHHH-----HHHcCCCCCHH-----HHHHhcCCCHHHHHHHHHHHhCCCCCHHHHH
Confidence            3479999999999999988778777753     34456643221     1122233332211     1122233333322


Q ss_pred             HHh---hcccCCCCCCCChhHHHHHHhCC--CcEEEEeCCChHHHHHHHHHhCCCCccceeEeecCCCCCCCCCCCCChh
Q 022360           87 SFV---HGRLPYENLKPDPVLRSLLLSLP--LRKIIFTNADKVHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSDDED  161 (298)
Q Consensus        87 ~~~---~~~~~~~~~~~~~g~~~~L~~l~--~~~~ivS~~~~~~~~~~l~~l~l~~~f~~i~~~~~~~~~~~~~~~~~~~  161 (298)
                      ...   ..........++|+ .++|..|+  .+++|+||+....++..++++++.+||+.++++++.+.           
T Consensus        73 ~~~~~~~~~~~~~~~~~~~~-~e~L~~L~~~~~l~I~T~~~~~~~~~~l~~~~l~~~fd~i~~~~~~~~-----------  140 (188)
T PRK10725         73 REKTEAVKSMLLDSVEPLPL-IEVVKAWHGRRPMAVGTGSESAIAEALLAHLGLRRYFDAVVAADDVQH-----------  140 (188)
T ss_pred             HHHHHHHHHHHhccCCCccH-HHHHHHHHhCCCEEEEcCCchHHHHHHHHhCCcHhHceEEEehhhccC-----------
Confidence            211   11122345567786 57888875  67899999999999999999999999999999988765           


Q ss_pred             hHHHHHhhhcccCCCCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHH
Q 022360          162 DIAFVESAASTTTSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKR  241 (298)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a~~  241 (298)
                                                                 .||+|+.+..++++++++|++|++|||+.+|+++|++
T Consensus       141 -------------------------------------------~KP~p~~~~~~~~~~~~~~~~~l~igDs~~di~aA~~  177 (188)
T PRK10725        141 -------------------------------------------HKPAPDTFLRCAQLMGVQPTQCVVFEDADFGIQAARA  177 (188)
T ss_pred             -------------------------------------------CCCChHHHHHHHHHcCCCHHHeEEEeccHhhHHHHHH
Confidence                                                       7999999999999999999999999999999999999


Q ss_pred             cCCeEEEec
Q 022360          242 VGLDTVLIG  250 (298)
Q Consensus       242 aG~~~v~v~  250 (298)
                      +|+.++++.
T Consensus       178 aG~~~i~~~  186 (188)
T PRK10725        178 AGMDAVDVR  186 (188)
T ss_pred             CCCEEEeec
Confidence            999999874

>PLN02940 riboflavin kinase

Probab=99.89  E-value=9.3e-23  Score=193.51  Aligned_cols=194  Identities=22%  Similarity=0.286  Sum_probs=146.0

Q ss_pred             CccEEEEeCCCCccCCCccHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHhCCCHHHH-----HHccCCCChhhHHH
Q 022360           13 KYDCLLFDLDDTLYPYSSGIAAACGQNIKDYMVEKLGIERSKIEDLGNLLYKNYGTTMAGL-----RAIGYDFDYDDYHS   87 (298)
Q Consensus        13 ~~k~viFDlDGTL~d~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~-----~~~~~~~~~~~~~~   87 (298)
                      .+++|+||+||||+|+.+.+..++..     +.++.|+......     .....|.+....     ...+.+...+.+..
T Consensus        10 ~ik~VIFDlDGTLvDt~~~~~~a~~~-----~~~~~G~~~~~~~-----~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~   79 (382)
T PLN02940         10 LVSHVILDLDGTLLNTDGIVSDVLKA-----FLVKYGKQWDGRE-----AQKIVGKTPLEAAATVVEDYGLPCSTDEFNS   79 (382)
T ss_pred             cCCEEEECCcCcCCcCHHHHHHHHHH-----HHHHcCCCCCHHH-----HHHhcCCCHHHHHHHHHHHhCCCCCHHHHHH
Confidence            48999999999999998888877775     4455676543321     122334332221     22233333333322


Q ss_pred             Hhhccc--CCCCCCCChhHHHHHHhCC---CcEEEEeCCChHHHHHHHH-HhCCCCccceeEeecCCCCCCCCCCCCChh
Q 022360           88 FVHGRL--PYENLKPDPVLRSLLLSLP---LRKIIFTNADKVHAVKVLS-RLGLEDCFEGIICFETLNPTHKNTVSDDED  161 (298)
Q Consensus        88 ~~~~~~--~~~~~~~~~g~~~~L~~l~---~~~~ivS~~~~~~~~~~l~-~l~l~~~f~~i~~~~~~~~~~~~~~~~~~~  161 (298)
                      ......  ......++||+.++|+.|+   ++++|+||+....+...++ ++++.++|+.++++++++.           
T Consensus        80 ~~~~~~~~~~~~~~l~pGv~elL~~Lk~~g~~l~IvTn~~~~~~~~~l~~~~gl~~~Fd~ii~~d~v~~-----------  148 (382)
T PLN02940         80 EITPLLSEQWCNIKALPGANRLIKHLKSHGVPMALASNSPRANIEAKISCHQGWKESFSVIVGGDEVEK-----------  148 (382)
T ss_pred             HHHHHHHHHHccCCCCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHhccChHhhCCEEEehhhcCC-----------
Confidence            221110  1235678999999999885   7799999999998888886 7899999999999988764           


Q ss_pred             hHHHHHhhhcccCCCCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHH
Q 022360          162 DIAFVESAASTTTSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKR  241 (298)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a~~  241 (298)
                                                                 +||+|+.+..++++++++|++|++|||+.+|+++|++
T Consensus       149 -------------------------------------------~KP~p~~~~~a~~~lgv~p~~~l~VGDs~~Di~aA~~  185 (382)
T PLN02940        149 -------------------------------------------GKPSPDIFLEAAKRLNVEPSNCLVIEDSLPGVMAGKA  185 (382)
T ss_pred             -------------------------------------------CCCCHHHHHHHHHHcCCChhHEEEEeCCHHHHHHHHH
Confidence                                                       7999999999999999999999999999999999999


Q ss_pred             cCCeEEEecCCC----CCCCCCEEeCCHHHHHH
Q 022360          242 VGLDTVLIGKSQ----RVKGADYAFESIHNIKE  270 (298)
Q Consensus       242 aG~~~v~v~~~~----~~~~ad~i~~s~~~l~~  270 (298)
                      +|+.++++.++.    ....++++++++.++..
T Consensus       186 aGi~~I~v~~g~~~~~~~~~ad~~i~sl~el~~  218 (382)
T PLN02940        186 AGMEVIAVPSIPKQTHLYSSADEVINSLLDLQP  218 (382)
T ss_pred             cCCEEEEECCCCcchhhccCccEEeCCHhHcCH
Confidence            999999997754    24678999999998753

>PRK10748 flavin mononucleotide phosphatase; Provisional

Probab=99.89  E-value=1.2e-21  Score=174.67  Aligned_cols=200  Identities=16%  Similarity=0.154  Sum_probs=135.0

Q ss_pred             cCccEEEEeCCCCccCCCccHHHHHHHHHHHHHHHHhCC---ChhHHHHHHHHHHHH-----------hCCCH-HHHHHc
Q 022360           12 AKYDCLLFDLDDTLYPYSSGIAAACGQNIKDYMVEKLGI---ERSKIEDLGNLLYKN-----------YGTTM-AGLRAI   76 (298)
Q Consensus        12 ~~~k~viFDlDGTL~d~~~~~~~~~~~~~~~~~~~~~g~---~~~~~~~~~~~~~~~-----------~g~~~-~~~~~~   76 (298)
                      .++|+|+||+||||+|+...+..++...+..+.....++   .......+...+...           .+... ..+...
T Consensus         8 ~~~k~iiFDlDGTL~D~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~   87 (238)
T PRK10748          8 GRISALTFDLDDTLYDNRPVILRTEQEALAFVQNYHPALRSFQNEDLQRLRQALREAEPEIYHDVTRWRWRAIEQAMLDA   87 (238)
T ss_pred             CCceeEEEcCcccccCChHHHHHHHHHHHHHHHHhCcchhhCCHHHHHHHHHHHHHhCchhhCcHHHHHHHHHHHHHHHc
Confidence            357899999999999998888887776554321110011   011111111111000           00001 111223


Q ss_pred             cCCCChh-----hHHHHhhcccCCCCCCCChhHHHHHHhCC--CcEEEEeCCChHHHHHHHHHhCCCCccceeEeecCCC
Q 022360           77 GYDFDYD-----DYHSFVHGRLPYENLKPDPVLRSLLLSLP--LRKIIFTNADKVHAVKVLSRLGLEDCFEGIICFETLN  149 (298)
Q Consensus        77 ~~~~~~~-----~~~~~~~~~~~~~~~~~~~g~~~~L~~l~--~~~~ivS~~~~~~~~~~l~~l~l~~~f~~i~~~~~~~  149 (298)
                      +...+..     .....+..  ......++||+.++|+.|+  ++++++||+...     ++++|+.++|+.++++++.+
T Consensus        88 g~~~~~~~~~~~~~~~~~~~--~~~~~~~~~gv~~~L~~L~~~~~l~i~Tn~~~~-----~~~~gl~~~fd~i~~~~~~~  160 (238)
T PRK10748         88 GLSAEEASAGADAAMINFAK--WRSRIDVPQATHDTLKQLAKKWPLVAITNGNAQ-----PELFGLGDYFEFVLRAGPHG  160 (238)
T ss_pred             CCCHHHHHHHHHHHHHHHHH--HhhcCCCCccHHHHHHHHHcCCCEEEEECCCch-----HHHCCcHHhhceeEecccCC
Confidence            3322111     11111211  1134688999999999986  678999998765     47789999999999998776


Q ss_pred             CCCCCCCCCChhhHHHHHhhhcccCCCCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEE
Q 022360          150 PTHKNTVSDDEDDIAFVESAASTTTSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFF  229 (298)
Q Consensus       150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~p~~~i~i  229 (298)
                      .                                                      .||+|++|..+++++|++|++|++|
T Consensus       161 ~------------------------------------------------------~KP~p~~~~~a~~~~~~~~~~~~~V  186 (238)
T PRK10748        161 R------------------------------------------------------SKPFSDMYHLAAEKLNVPIGEILHV  186 (238)
T ss_pred             c------------------------------------------------------CCCcHHHHHHHHHHcCCChhHEEEE
Confidence            5                                                      6999999999999999999999999


Q ss_pred             cCCc-cchHHHHHcCCeEEEecCCCC--------CCCCCEEeCCHHHHHHHh
Q 022360          230 EDSV-RNIQAGKRVGLDTVLIGKSQR--------VKGADYAFESIHNIKEAI  272 (298)
Q Consensus       230 GDs~-~Di~~a~~aG~~~v~v~~~~~--------~~~ad~i~~s~~~l~~~l  272 (298)
                      ||+. +|+.+|+++|+.++++.++..        ...+++.+.++.+|.++|
T Consensus       187 GD~~~~Di~~A~~aG~~~i~v~~~~~~~~~~~~~~~~p~~~i~~l~el~~~~  238 (238)
T PRK10748        187 GDDLTTDVAGAIRCGMQACWINPENGDLMQTWDSRLLPHIEISRLASLTSLI  238 (238)
T ss_pred             cCCcHHHHHHHHHCCCeEEEEcCCCccccccccccCCCCEEECCHHHHHhhC
Confidence            9995 999999999999999966432        245889999999988764

>PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated

Probab=99.88  E-value=3.1e-22  Score=194.42  Aligned_cols=205  Identities=13%  Similarity=0.155  Sum_probs=146.7

Q ss_pred             ccccCccEEEEeCCCCccCCCccHHHHHHHHHHHHHHHH-hCCChhHHHHHHHHHHHHhCCCHHHH-HHccCCCC---hh
Q 022360            9 MAAAKYDCLLFDLDDTLYPYSSGIAAACGQNIKDYMVEK-LGIERSKIEDLGNLLYKNYGTTMAGL-RAIGYDFD---YD   83 (298)
Q Consensus         9 ~~~~~~k~viFDlDGTL~d~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~g~~~~~~-~~~~~~~~---~~   83 (298)
                      ...+++++|+|||||||+|+...+..++.+.+.++.... .+.... ..    .+....|.+.... ..+.....   .+
T Consensus       236 ~~~~m~k~vIFDlDGTLiDs~~~~~~a~~~~~~~~~~~~~~~~~~~-~~----~~~~~~G~~~~~~~~~l~~~~~~~~~~  310 (459)
T PRK06698        236 GENEMLQALIFDMDGTLFQTDKILELSLDDTFDHLRSLQLWDTVTP-ID----KYREIMGVPLPKVWEALLPDHSLEIRE  310 (459)
T ss_pred             chHHhhhheeEccCCceecchhHHHHHHHHHHHHHhhhcccCCCCC-HH----HHHHHcCCChHHHHHHHhhhcchhHHH
Confidence            334668999999999999999999999998777642211 111111 11    1222334433322 11111111   11


Q ss_pred             h----HHHHhhcccCCCCCCCChhHHHHHHhCC---CcEEEEeCCChHHHHHHHHHhCCCCccceeEeecCCCCCCCCCC
Q 022360           84 D----YHSFVHGRLPYENLKPDPVLRSLLLSLP---LRKIIFTNADKVHAVKVLSRLGLEDCFEGIICFETLNPTHKNTV  156 (298)
Q Consensus        84 ~----~~~~~~~~~~~~~~~~~~g~~~~L~~l~---~~~~ivS~~~~~~~~~~l~~l~l~~~f~~i~~~~~~~~~~~~~~  156 (298)
                      .    +.+.+.+.+......++||+.++|+.|+   ++++|+|++....++..++++++.+||+.++++++..       
T Consensus       311 ~~~~~~~~~~~~~~~~~~~~l~pG~~e~L~~Lk~~g~~l~IvS~~~~~~~~~~l~~~~l~~~f~~i~~~d~v~-------  383 (459)
T PRK06698        311 QTDAYFLERLIENIKSGKGALYPNVKEIFTYIKENNCSIYIASNGLTEYLRAIVSYYDLDQWVTETFSIEQIN-------  383 (459)
T ss_pred             HHHHHHHHHhHHHHhhcCCCcCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHCCcHhhcceeEecCCCC-------
Confidence            1    2222222111234688999999998884   7899999999999999999999999999999987653       


Q ss_pred             CCChhhHHHHHhhhcccCCCCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccch
Q 022360          157 SDDEDDIAFVESAASTTTSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNI  236 (298)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di  236 (298)
                                                                      .||||+.+..++++++  |++|++|||+.+|+
T Consensus       384 ------------------------------------------------~~~kP~~~~~al~~l~--~~~~v~VGDs~~Di  413 (459)
T PRK06698        384 ------------------------------------------------SLNKSDLVKSILNKYD--IKEAAVVGDRLSDI  413 (459)
T ss_pred             ------------------------------------------------CCCCcHHHHHHHHhcC--cceEEEEeCCHHHH
Confidence                                                            3677789999998865  68999999999999


Q ss_pred             HHHHHcCCeEEEecCCC----CCCCCCEEeCCHHHHHHHhHHh
Q 022360          237 QAGKRVGLDTVLIGKSQ----RVKGADYAFESIHNIKEAIPEL  275 (298)
Q Consensus       237 ~~a~~aG~~~v~v~~~~----~~~~ad~i~~s~~~l~~~l~~~  275 (298)
                      .+|+++|+.++++.++.    ....++++++++.+|.+++..+
T Consensus       414 ~aAk~AG~~~I~v~~~~~~~~~~~~~d~~i~~l~el~~~l~~~  456 (459)
T PRK06698        414 NAAKDNGLIAIGCNFDFAQEDELAQADIVIDDLLELKGILSTV  456 (459)
T ss_pred             HHHHHCCCeEEEEeCCCCcccccCCCCEEeCCHHHHHHHHHHH
Confidence            99999999999997754    2356899999999999887654

>TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II

Probab=99.88  E-value=9e-22  Score=170.05  Aligned_cols=104  Identities=21%  Similarity=0.407  Sum_probs=95.8

Q ss_pred             CCCCCChhHHHHHHhCC---CcEEEEeCCChHHHHHHHHHhCCCCccceeEeecCCCCCCCCCCCCChhhHHHHHhhhcc
Q 022360           96 ENLKPDPVLRSLLLSLP---LRKIIFTNADKVHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSDDEDDIAFVESAAST  172 (298)
Q Consensus        96 ~~~~~~~g~~~~L~~l~---~~~~ivS~~~~~~~~~~l~~l~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  172 (298)
                      ....++||+.++|+.|+   ++++|+||++...++..++++|+.++|+.++++++.+.                      
T Consensus        89 ~~~~~~~~~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~gl~~~fd~i~~s~~~~~----------------------  146 (198)
T TIGR01428        89 LRLPPHPDVPAGLRALKERGYRLAILSNGSPAMLKSLVKHAGLDDPFDAVLSADAVRA----------------------  146 (198)
T ss_pred             hcCCCCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHCCChhhhheeEehhhcCC----------------------
Confidence            34678999999999885   67999999999999999999999999999999988775                      


Q ss_pred             cCCCCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHHcCCeEEEecCC
Q 022360          173 TTSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTVLIGKS  252 (298)
Q Consensus       173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a~~aG~~~v~v~~~  252 (298)
                                                      .||+|++|..+++++|++|++|++|||+.+|+.+|+++|+.++++.++
T Consensus       147 --------------------------------~KP~~~~~~~~~~~~~~~p~~~~~vgD~~~Di~~A~~~G~~~i~v~r~  194 (198)
T TIGR01428       147 --------------------------------YKPAPQVYQLALEALGVPPDEVLFVASNPWDLGGAKKFGFKTAWVNRP  194 (198)
T ss_pred             --------------------------------CCCCHHHHHHHHHHhCCChhhEEEEeCCHHHHHHHHHCCCcEEEecCC
Confidence                                            799999999999999999999999999999999999999999999765


Q ss_pred             C
Q 022360          253 Q  253 (298)
Q Consensus       253 ~  253 (298)
                      .
T Consensus       195 ~  195 (198)
T TIGR01428       195 G  195 (198)
T ss_pred             C
Confidence            4

Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related.

>TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase

Probab=99.87  E-value=2.3e-21  Score=165.18  Aligned_cols=170  Identities=21%  Similarity=0.341  Sum_probs=121.8

Q ss_pred             ccEEEEeCCCCccCCCccHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHhCCCHHHH-----HHccCCCChhhHH--
Q 022360           14 YDCLLFDLDDTLYPYSSGIAAACGQNIKDYMVEKLGIERSKIEDLGNLLYKNYGTTMAGL-----RAIGYDFDYDDYH--   86 (298)
Q Consensus        14 ~k~viFDlDGTL~d~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~-----~~~~~~~~~~~~~--   86 (298)
                      +++|+||+||||+|+...+..++..     +.+..|.+...  .   ......|.+....     ...+...+.+.+.  
T Consensus         1 ~~~iiFD~DGTL~ds~~~~~~~~~~-----~~~~~g~~~~~--~---~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~   70 (185)
T TIGR02009         1 YKAVIFDMDGVIVDTAPLHAQAWKH-----LADKYGIEFDK--Q---YNTSLGGLSREDILRAILKLRKPGLSLETIHQL   70 (185)
T ss_pred             CCeEEEcCCCcccCChHHHHHHHHH-----HHHHcCCCCCH--H---HHHHcCCCCHHHHHHHHHHhcCCCCCHHHHHHH
Confidence            5799999999999988777777765     34445655321  1   1111123322211     1111123333221  


Q ss_pred             -----HHhhcccCCCCCCCChhHHHHHHhCC---CcEEEEeCCChHHHHHHHHHhCCCCccceeEeecCCCCCCCCCCCC
Q 022360           87 -----SFVHGRLPYENLKPDPVLRSLLLSLP---LRKIIFTNADKVHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSD  158 (298)
Q Consensus        87 -----~~~~~~~~~~~~~~~~g~~~~L~~l~---~~~~ivS~~~~~~~~~~l~~l~l~~~f~~i~~~~~~~~~~~~~~~~  158 (298)
                           ..+...+......++||+.++|+.|+   .+++++|++  ..++..++++++.++|+.++++++.+.        
T Consensus        71 ~~~~~~~~~~~~~~~~~~~~~g~~~~l~~l~~~g~~i~i~S~~--~~~~~~l~~~~l~~~f~~v~~~~~~~~--------  140 (185)
T TIGR02009        71 AERKNELYRELLRLTGAEVLPGIENFLKRLKKKGIAVGLGSSS--KNADRILAKLGLTDYFDAIVDADEVKE--------  140 (185)
T ss_pred             HHHHHHHHHHHHhccCCCCCcCHHHHHHHHHHcCCeEEEEeCc--hhHHHHHHHcChHHHCCEeeehhhCCC--------
Confidence                 12222111234788999999998874   678899988  668889999999999999998887664        


Q ss_pred             ChhhHHHHHhhhcccCCCCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccchHH
Q 022360          159 DEDDIAFVESAASTTTSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQA  238 (298)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~  238 (298)
                                                                    .||+|+.+.+++++++++|++|++|||+.+|+++
T Consensus       141 ----------------------------------------------~kp~~~~~~~~~~~~~~~~~~~v~IgD~~~di~a  174 (185)
T TIGR02009       141 ----------------------------------------------GKPHPETFLLAAELLGVSPNECVVFEDALAGVQA  174 (185)
T ss_pred             ----------------------------------------------CCCChHHHHHHHHHcCCCHHHeEEEeCcHhhHHH
Confidence                                                          7999999999999999999999999999999999


Q ss_pred             HHHcCCeEEEe
Q 022360          239 GKRVGLDTVLI  249 (298)
Q Consensus       239 a~~aG~~~v~v  249 (298)
                      |+++|+.++.+
T Consensus       175 A~~~G~~~i~v  185 (185)
T TIGR02009       175 ARAAGMFAVAV  185 (185)
T ss_pred             HHHCCCeEeeC
Confidence            99999998864

All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509).

>PLN02779 haloacid dehalogenase-like hydrolase family protein

Probab=99.87  E-value=2.6e-21  Score=176.95  Aligned_cols=199  Identities=20%  Similarity=0.283  Sum_probs=132.3

Q ss_pred             cCccEEEEeCCCCccCCC-ccHHHHHHHHHHHHHHHHhCCC-hhHHHHHHHHHHHHhCCCHHHH----HHccCC------
Q 022360           12 AKYDCLLFDLDDTLYPYS-SGIAAACGQNIKDYMVEKLGIE-RSKIEDLGNLLYKNYGTTMAGL----RAIGYD------   79 (298)
Q Consensus        12 ~~~k~viFDlDGTL~d~~-~~~~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~~g~~~~~~----~~~~~~------   79 (298)
                      ..+++|||||||||+|+. ..+..++.+.+     +..|++ ..........+.. .|.....+    ...+..      
T Consensus        38 ~~~k~VIFDlDGTLvDS~~~~~~~a~~~~l-----~~~G~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~  111 (286)
T PLN02779         38 ALPEALLFDCDGVLVETERDGHRVAFNDAF-----KEFGLRPVEWDVELYDELLN-IGGGKERMTWYFNENGWPTSTIEK  111 (286)
T ss_pred             cCCcEEEEeCceeEEccccHHHHHHHHHHH-----HHcCCCCCCCCHHHHHHHHc-cCCChHHHHHHHHHcCCCcccccc
Confidence            458999999999999998 77778887643     445662 1110110001111 22221111    001111      


Q ss_pred             --CChh-------hHH----HHhhcccCCCCCCCChhHHHHHHhC---CCcEEEEeCCChHHHHHHHHHhCCCCccce--
Q 022360           80 --FDYD-------DYH----SFVHGRLPYENLKPDPVLRSLLLSL---PLRKIIFTNADKVHAVKVLSRLGLEDCFEG--  141 (298)
Q Consensus        80 --~~~~-------~~~----~~~~~~~~~~~~~~~~g~~~~L~~l---~~~~~ivS~~~~~~~~~~l~~l~l~~~f~~--  141 (298)
                        .+.+       .+.    ..+........+.++||+.++|..|   +++++|+||+....+...++++....+|+.  
T Consensus       112 ~~~~~e~~~~~~~~~~~~~~~~y~~~~~~~~~~l~pGv~elL~~L~~~g~~l~IvTn~~~~~~~~~l~~~~~~~~~~~~~  191 (286)
T PLN02779        112 APKDEEERKELVDSLHDRKTELFKELIESGALPLRPGVLRLMDEALAAGIKVAVCSTSNEKAVSKIVNTLLGPERAQGLD  191 (286)
T ss_pred             CCccchhhHHHHHHHHHHHHHHHHHHHHhcCCCchhhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhccccccCceE
Confidence              0011       111    1111111112358899999999887   478999999999999988887744344432  


Q ss_pred             eEeecCCCCCCCCCCCCChhhHHHHHhhhcccCCCCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCC
Q 022360          142 IICFETLNPTHKNTVSDDEDDIAFVESAASTTTSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASI  221 (298)
Q Consensus       142 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i  221 (298)
                      ++++++.+.                                                      .||+|++|..+++++|+
T Consensus       192 ~v~~~~~~~------------------------------------------------------~KP~p~~~~~a~~~~~~  217 (286)
T PLN02779        192 VFAGDDVPK------------------------------------------------------KKPDPDIYNLAAETLGV  217 (286)
T ss_pred             EEeccccCC------------------------------------------------------CCCCHHHHHHHHHHhCc
Confidence            235555443                                                      69999999999999999


Q ss_pred             CCCcEEEEcCCccchHHHHHcCCeEEEecCCCC----CCCCCEEeCCHHHHHH
Q 022360          222 NPQRTLFFEDSVRNIQAGKRVGLDTVLIGKSQR----VKGADYAFESIHNIKE  270 (298)
Q Consensus       222 ~p~~~i~iGDs~~Di~~a~~aG~~~v~v~~~~~----~~~ad~i~~s~~~l~~  270 (298)
                      +|++|++|||+.+|+++|+++|+.++++.++..    ...++++++++.++..
T Consensus       218 ~p~~~l~IGDs~~Di~aA~~aG~~~i~v~~g~~~~~~l~~ad~vi~~~~~l~~  270 (286)
T PLN02779        218 DPSRCVVVEDSVIGLQAAKAAGMRCIVTKSSYTADEDFSGADAVFDCLGDVPL  270 (286)
T ss_pred             ChHHEEEEeCCHHhHHHHHHcCCEEEEEccCCccccccCCCcEEECChhhcch
Confidence            999999999999999999999999999976542    3568999999999753

>TIGR01990 bPGM beta-phosphoglucomutase

Probab=99.86  E-value=1.8e-21  Score=165.79  Aligned_cols=169  Identities=22%  Similarity=0.268  Sum_probs=119.8

Q ss_pred             EEEEeCCCCccCCCccHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHhCCCHHH-----HHHccCCCChhhHHHH--
Q 022360           16 CLLFDLDDTLYPYSSGIAAACGQNIKDYMVEKLGIERSKIEDLGNLLYKNYGTTMAG-----LRAIGYDFDYDDYHSF--   88 (298)
Q Consensus        16 ~viFDlDGTL~d~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~-----~~~~~~~~~~~~~~~~--   88 (298)
                      +|+||+||||+|+...+..++..     +.+..|++......     ....|.+...     +...+...+.+.+...  
T Consensus         1 ~iiFD~DGTL~ds~~~~~~~~~~-----~~~~~g~~~~~~~~-----~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~   70 (185)
T TIGR01990         1 AVIFDLDGVITDTAEYHYLAWKA-----LADELGIPFDEEFN-----ESLKGVSREDSLERILDLGGKKYSEEEKEELAE   70 (185)
T ss_pred             CeEEcCCCccccChHHHHHHHHH-----HHHHcCCCCCHHHH-----HHhcCCChHHHHHHHHHhcCCCCCHHHHHHHHH
Confidence            58999999999998888777765     44555665332110     1112222111     1122333333222111  


Q ss_pred             -----hhcccC-CCCCCCChhHHHHHHhCC---CcEEEEeCCChHHHHHHHHHhCCCCccceeEeecCCCCCCCCCCCCC
Q 022360           89 -----VHGRLP-YENLKPDPVLRSLLLSLP---LRKIIFTNADKVHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSDD  159 (298)
Q Consensus        89 -----~~~~~~-~~~~~~~~g~~~~L~~l~---~~~~ivS~~~~~~~~~~l~~l~l~~~f~~i~~~~~~~~~~~~~~~~~  159 (298)
                           +..... .....++||+.++|+.|+   ++++|+|++..  ....++++++..+|+.++++++.+.         
T Consensus        71 ~~~~~~~~~~~~~~~~~~~pg~~~~L~~L~~~g~~~~i~s~~~~--~~~~l~~~~l~~~f~~~~~~~~~~~---------  139 (185)
T TIGR01990        71 RKNDYYVELLKELTPADVLPGIKNLLDDLKKNNIKIALASASKN--APTVLEKLGLIDYFDAIVDPAEIKK---------  139 (185)
T ss_pred             HHHHHHHHHHHhcCCcccCccHHHHHHHHHHCCCeEEEEeCCcc--HHHHHHhcCcHhhCcEEEehhhcCC---------
Confidence                 111110 123478999999999985   67889998654  4678999999999999999887764         


Q ss_pred             hhhHHHHHhhhcccCCCCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccchHHH
Q 022360          160 EDDIAFVESAASTTTSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAG  239 (298)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a  239 (298)
                                                                   .||+|+.|..++++++++|++|++|||+.+|+++|
T Consensus       140 ---------------------------------------------~kp~p~~~~~~~~~~~~~~~~~v~vgD~~~di~aA  174 (185)
T TIGR01990       140 ---------------------------------------------GKPDPEIFLAAAEGLGVSPSECIGIEDAQAGIEAI  174 (185)
T ss_pred             ---------------------------------------------CCCChHHHHHHHHHcCCCHHHeEEEecCHHHHHHH
Confidence                                                         79999999999999999999999999999999999


Q ss_pred             HHcCCeEEEec
Q 022360          240 KRVGLDTVLIG  250 (298)
Q Consensus       240 ~~aG~~~v~v~  250 (298)
                      +++|+.+++++
T Consensus       175 ~~aG~~~i~v~  185 (185)
T TIGR01990       175 KAAGMFAVGVG  185 (185)
T ss_pred             HHcCCEEEecC
Confidence            99999999763

The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state.

>TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase

Probab=99.86  E-value=1.3e-20  Score=163.22  Aligned_cols=174  Identities=22%  Similarity=0.277  Sum_probs=120.1

Q ss_pred             cEEEEeCCCCccCCCccHHHHHHHHHHHHHHHHhCCChhHHH--HHHHHHHHH-------h----CCCHHH---------
Q 022360           15 DCLLFDLDDTLYPYSSGIAAACGQNIKDYMVEKLGIERSKIE--DLGNLLYKN-------Y----GTTMAG---------   72 (298)
Q Consensus        15 k~viFDlDGTL~d~~~~~~~~~~~~~~~~~~~~~g~~~~~~~--~~~~~~~~~-------~----g~~~~~---------   72 (298)
                      |+|+||+||||+|+...+..++..     +.+..|++....+  ......+..       +    |.+...         
T Consensus         1 k~viFDlDGTL~d~~~~~~~a~~~-----~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~   75 (203)
T TIGR02252         1 KLITFDAVGTLLALKEPVGEVYCE-----IARKYGVEVSPDELEQAFRRAFKAMSEAFPNFGFSSGLTPQQWWQKLVRDT   75 (203)
T ss_pred             CeEEEecCCceeeeCCCHHHHHHH-----HHHHhCCCCCHHHHHHHHHHHHHHHHhhCCCCCCCCCCCHHHHHHHHHHHH
Confidence            589999999999988888888775     3445666543211  010011111       1    222110         


Q ss_pred             HHHccCCC--ChhhHHHHhhcc-cCCCCCCCChhHHHHHHhCC---CcEEEEeCCChHHHHHHHHHhCCCCccceeEeec
Q 022360           73 LRAIGYDF--DYDDYHSFVHGR-LPYENLKPDPVLRSLLLSLP---LRKIIFTNADKVHAVKVLSRLGLEDCFEGIICFE  146 (298)
Q Consensus        73 ~~~~~~~~--~~~~~~~~~~~~-~~~~~~~~~~g~~~~L~~l~---~~~~ivS~~~~~~~~~~l~~l~l~~~f~~i~~~~  146 (298)
                      +...+...  ....+...+... .......++||+.++|+.|+   ++++|+||+... ++..++++++..+|+.+++++
T Consensus        76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~-~~~~l~~~~l~~~fd~i~~s~  154 (203)
T TIGR02252        76 FGRAGVPDPESFEKIFEELYSYFATPEPWQVYPDAIKLLKDLRERGLILGVISNFDSR-LRGLLEALGLLEYFDFVVTSY  154 (203)
T ss_pred             HHhcCCCCchhHHHHHHHHHHHhcCCCcceeCcCHHHHHHHHHHCCCEEEEEeCCchh-HHHHHHHCCcHHhcceEEeec
Confidence            11122110  111111111111 11133578999999999885   678999998765 577889999999999999998


Q ss_pred             CCCCCCCCCCCCChhhHHHHHhhhcccCCCCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCCCCcE
Q 022360          147 TLNPTHKNTVSDDEDDIAFVESAASTTTSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRT  226 (298)
Q Consensus       147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~p~~~  226 (298)
                      +.+.                                                      .||+|+.|.++++++|++|++|
T Consensus       155 ~~~~------------------------------------------------------~KP~~~~~~~~~~~~~~~~~~~  180 (203)
T TIGR02252       155 EVGA------------------------------------------------------EKPDPKIFQEALERAGISPEEA  180 (203)
T ss_pred             ccCC------------------------------------------------------CCCCHHHHHHHHHHcCCChhHE
Confidence            8775                                                      7999999999999999999999


Q ss_pred             EEEcCCc-cchHHHHHcCCeEEE
Q 022360          227 LFFEDSV-RNIQAGKRVGLDTVL  248 (298)
Q Consensus       227 i~iGDs~-~Di~~a~~aG~~~v~  248 (298)
                      ++|||+. +||++|+++|+.+++
T Consensus       181 ~~IgD~~~~Di~~A~~aG~~~i~  203 (203)
T TIGR02252       181 LHIGDSLRNDYQGARAAGWRALL  203 (203)
T ss_pred             EEECCCchHHHHHHHHcCCeeeC
Confidence            9999998 899999999999874

Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes.

>PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A

Probab=99.85  E-value=1.5e-21  Score=163.02  Aligned_cols=168  Identities=30%  Similarity=0.484  Sum_probs=122.0

Q ss_pred             EEEeCCCCccCCCccHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHhCCCHHHH-----HHccCCCChhhHHHHhhc
Q 022360           17 LLFDLDDTLYPYSSGIAAACGQNIKDYMVEKLGIERSKIEDLGNLLYKNYGTTMAGL-----RAIGYDFDYDDYHSFVHG   91 (298)
Q Consensus        17 viFDlDGTL~d~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~-----~~~~~~~~~~~~~~~~~~   91 (298)
                      |+||+||||+++...+...+..    .+.+..+.+... .    .+....+......     ...+..  ...+.+.+.+
T Consensus         1 iifD~dgtL~d~~~~~~~~~~~----~~~~~~~~~~~~-~----~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~   69 (176)
T PF13419_consen    1 IIFDLDGTLVDTDPAIFRALQR----LALEEFGLEISA-E----ELRELFGKSYEEALERLLERFGID--PEEIQELFRE   69 (176)
T ss_dssp             EEEESBTTTEEHHHHHHHHHHH----HHHHHTTHHHHH-H----HHHHHTTSHHHHHHHHHHHHHHHH--HHHHHHHHHH
T ss_pred             cEEECCCCcEeCHHHHHHHHHH----HHHHHhCCCCCH-H----HHHHHhCCCHHHHHHHhhhccchh--HHHHHHHhhh
Confidence            7999999999966645455443    345555554221 1    1111122221111     111111  2223232222


Q ss_pred             ccCCCCCCCChhHHHHHHhCC---CcEEEEeCCChHHHHHHHHHhCCCCccceeEeecCCCCCCCCCCCCChhhHHHHHh
Q 022360           92 RLPYENLKPDPVLRSLLLSLP---LRKIIFTNADKVHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSDDEDDIAFVES  168 (298)
Q Consensus        92 ~~~~~~~~~~~g~~~~L~~l~---~~~~ivS~~~~~~~~~~l~~l~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~  168 (298)
                      ........++||+.++|+.|+   ++++++|+.+...+...++++++..+|+.++++++.+.                  
T Consensus        70 ~~~~~~~~~~~~~~~~L~~l~~~~~~~~i~Sn~~~~~~~~~l~~~~~~~~f~~i~~~~~~~~------------------  131 (176)
T PF13419_consen   70 YNLESKLQPYPGVRELLERLKAKGIPLVIVSNGSRERIERVLERLGLDDYFDEIISSDDVGS------------------  131 (176)
T ss_dssp             HHHHGGEEESTTHHHHHHHHHHTTSEEEEEESSEHHHHHHHHHHTTHGGGCSEEEEGGGSSS------------------
T ss_pred             hhhhhccchhhhhhhhhhhcccccceeEEeecCCcccccccccccccccccccccccchhhh------------------
Confidence            211245788999999999885   88999999999999999999999999999999988775                  


Q ss_pred             hhcccCCCCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHHcCCeEEE
Q 022360          169 AASTTTSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTVL  248 (298)
Q Consensus       169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a~~aG~~~v~  248 (298)
                                                          .||++..|+.++++++++|++|++|||+..|+++|+++|+.+++
T Consensus       132 ------------------------------------~Kp~~~~~~~~~~~~~~~p~~~~~vgD~~~d~~~A~~~G~~~i~  175 (176)
T PF13419_consen  132 ------------------------------------RKPDPDAYRRALEKLGIPPEEILFVGDSPSDVEAAKEAGIKTIW  175 (176)
T ss_dssp             ------------------------------------STTSHHHHHHHHHHHTSSGGGEEEEESSHHHHHHHHHTTSEEEE
T ss_pred             ------------------------------------hhhHHHHHHHHHHHcCCCcceEEEEeCCHHHHHHHHHcCCeEEe
Confidence                                                79999999999999999999999999999999999999999997


Q ss_pred             e
Q 022360          249 I  249 (298)
Q Consensus       249 v  249 (298)
                      +
T Consensus       176 v  176 (176)
T PF13419_consen  176 V  176 (176)
T ss_dssp             E
T ss_pred             C
Confidence            5

...

>TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED

Probab=99.84  E-value=8.3e-21  Score=161.00  Aligned_cols=97  Identities=34%  Similarity=0.496  Sum_probs=87.8

Q ss_pred             CCCChhHHHHHHhCC---CcEEEEeCCChHHHHHHHHHhCCCCccceeEeecCCCCCCCCCCCCChhhHHHHHhhhcccC
Q 022360           98 LKPDPVLRSLLLSLP---LRKIIFTNADKVHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSDDEDDIAFVESAASTTT  174 (298)
Q Consensus        98 ~~~~~g~~~~L~~l~---~~~~ivS~~~~~~~~~~l~~l~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  174 (298)
                      ..++||+.++|+.|+   ++++++||+.... .....++++..+|+.++++++.+.                        
T Consensus        84 ~~~~~g~~~~l~~l~~~g~~~~i~Tn~~~~~-~~~~~~~~l~~~f~~i~~~~~~~~------------------------  138 (183)
T TIGR01509        84 LKPLPGVEPLLEALRARGKKLALLTNSPRDH-AVLVQELGLRDLFDVVIFSGDVGR------------------------  138 (183)
T ss_pred             CccCcCHHHHHHHHHHCCCeEEEEeCCchHH-HHHHHhcCCHHHCCEEEEcCCCCC------------------------
Confidence            688999999999874   6799999999888 666667999999999999887664                        


Q ss_pred             CCCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHHcCCeEEEe
Q 022360          175 SANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTVLI  249 (298)
Q Consensus       175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a~~aG~~~v~v  249 (298)
                                                    +||+|..+..++++++++|++|++|||+..|+.+|+++|+.++++
T Consensus       139 ------------------------------~KP~~~~~~~~~~~~~~~~~~~~~vgD~~~di~aA~~~G~~~i~v  183 (183)
T TIGR01509       139 ------------------------------GKPDPDIYLLALKKLGLKPEECLFVDDSPAGIEAAKAAGMHTVLV  183 (183)
T ss_pred             ------------------------------CCCCHHHHHHHHHHcCCCcceEEEEcCCHHHHHHHHHcCCEEEeC
Confidence                                          799999999999999999999999999999999999999999864

HAD subfamilies caused by an overly broad single model.

>PHA02597 30

Probab=99.83  E-value=8.4e-20  Score=157.68  Aligned_cols=183  Identities=15%  Similarity=0.156  Sum_probs=119.3

Q ss_pred             ccEEEEeCCCCccCCCccHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHhCCCHHHHHHccCCC-ChhhHHHHhhcc
Q 022360           14 YDCLLFDLDDTLYPYSSGIAAACGQNIKDYMVEKLGIERSKIEDLGNLLYKNYGTTMAGLRAIGYDF-DYDDYHSFVHGR   92 (298)
Q Consensus        14 ~k~viFDlDGTL~d~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~-~~~~~~~~~~~~   92 (298)
                      +|+|+|||||||+|+...    +.     .+.+..|++...   ....+...........  ++.+. ....+...+...
T Consensus         2 ~k~viFDlDGTLiD~~~~----~~-----~~~~~~g~~~~~---~~~~~g~~~~~~~~~~--~~~~~~~~~~~~~~~~~~   67 (197)
T PHA02597          2 KPTILTDVDGVLLSWQSG----LP-----YFAQKYNIPTDH---ILKMIQDERFRDPGEL--FGCDQELAKKLIEKYNNS   67 (197)
T ss_pred             CcEEEEecCCceEchhhc----cH-----HHHHhcCCCHHH---HHHHHhHhhhcCHHHH--hcccHHHHHHHhhhhhHH
Confidence            789999999999994432    22     244566775422   1111111111111111  11110 011111111111


Q ss_pred             cCCCCCCCChhHHHHHHhCC--CcEEEEeCCChHHHHHHHHHhCCCC----ccceeEeecCCCCCCCCCCCCChhhHHHH
Q 022360           93 LPYENLKPDPVLRSLLLSLP--LRKIIFTNADKVHAVKVLSRLGLED----CFEGIICFETLNPTHKNTVSDDEDDIAFV  166 (298)
Q Consensus        93 ~~~~~~~~~~g~~~~L~~l~--~~~~ivS~~~~~~~~~~l~~l~l~~----~f~~i~~~~~~~~~~~~~~~~~~~~~~~~  166 (298)
                      .......++||+.++|+.|+  .+.+++|+.........++.+++..    +|+.+++.++                   
T Consensus        68 ~~~~~~~~~pG~~e~L~~L~~~~~~~i~Tn~~~~~~~~~~~~~~l~~~f~~~f~~i~~~~~-------------------  128 (197)
T PHA02597         68 DFIRYLSAYDDALDVINKLKEDYDFVAVTALGDSIDALLNRQFNLNALFPGAFSEVLMCGH-------------------  128 (197)
T ss_pred             HHHHhccCCCCHHHHHHHHHhcCCEEEEeCCccchhHHHHhhCCHHHhCCCcccEEEEecc-------------------
Confidence            11244678999999999996  4577888877666666777777765    4556666553                   


Q ss_pred             HhhhcccCCCCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHHc--CC
Q 022360          167 ESAASTTTSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRV--GL  244 (298)
Q Consensus       167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a~~a--G~  244 (298)
                                                            .||||+.+..+++++|  |++|+||||+.+|+++|+++  |+
T Consensus       129 --------------------------------------~~~kp~~~~~a~~~~~--~~~~v~vgDs~~di~aA~~a~~Gi  168 (197)
T PHA02597        129 --------------------------------------DESKEKLFIKAKEKYG--DRVVCFVDDLAHNLDAAHEALSQL  168 (197)
T ss_pred             --------------------------------------CcccHHHHHHHHHHhC--CCcEEEeCCCHHHHHHHHHHHcCC
Confidence                                                  3677899999999999  88899999999999999999  99


Q ss_pred             eEEEecCCCC--CCCCCEEeCCHHHHH
Q 022360          245 DTVLIGKSQR--VKGADYAFESIHNIK  269 (298)
Q Consensus       245 ~~v~v~~~~~--~~~ad~i~~s~~~l~  269 (298)
                      .++++.++..  ...+++.+.|+.|+.
T Consensus       169 ~~i~~~~~~~~~~~~~~~~~~~~~~~~  195 (197)
T PHA02597        169 PVIHMLRGERDHIPKLAHRVKSWNDIE  195 (197)
T ss_pred             cEEEecchhhccccchhhhhccHHHHh
Confidence            9999988864  335678888888775

2 hypothetical protein; Provisional

>PLN02919 haloacid dehalogenase-like hydrolase family protein

Probab=99.82  E-value=1.7e-19  Score=189.88  Aligned_cols=193  Identities=21%  Similarity=0.299  Sum_probs=143.9

Q ss_pred             cCccEEEEeCCCCccCCCccHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHhCCCHHHHH-----HccC-CCChhh-
Q 022360           12 AKYDCLLFDLDDTLYPYSSGIAAACGQNIKDYMVEKLGIERSKIEDLGNLLYKNYGTTMAGLR-----AIGY-DFDYDD-   84 (298)
Q Consensus        12 ~~~k~viFDlDGTL~d~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~-----~~~~-~~~~~~-   84 (298)
                      +++++|+|||||||+|+...+..++.+     +.++.|++.....     +....|.....+.     ..+. ..+.+. 
T Consensus        73 ~~ikaVIFDlDGTLiDS~~~~~~a~~~-----~~~~~G~~it~e~-----~~~~~G~~~~~~~~~~~~~~~l~~~~~~~~  142 (1057)
T PLN02919         73 GKVSAVLFDMDGVLCNSEEPSRRAAVD-----VFAEMGVEVTVED-----FVPFMGTGEANFLGGVASVKGVKGFDPDAA  142 (1057)
T ss_pred             CCCCEEEECCCCCeEeChHHHHHHHHH-----HHHHcCCCCCHHH-----HHHHhCCCHHHHHHHHHHhcCCCCCCHHHH
Confidence            468999999999999998888877775     3445676543211     1223344433221     1111 122222 


Q ss_pred             ---HHHHhhcccC-CCCCCCChhHHHHHHhCC---CcEEEEeCCChHHHHHHHHHhCCC-CccceeEeecCCCCCCCCCC
Q 022360           85 ---YHSFVHGRLP-YENLKPDPVLRSLLLSLP---LRKIIFTNADKVHAVKVLSRLGLE-DCFEGIICFETLNPTHKNTV  156 (298)
Q Consensus        85 ---~~~~~~~~~~-~~~~~~~~g~~~~L~~l~---~~~~ivS~~~~~~~~~~l~~l~l~-~~f~~i~~~~~~~~~~~~~~  156 (298)
                         +...+..... .....++||+.++|+.|+   ++++|+|+.....++..++++++. .+|+.+++.++++.      
T Consensus       143 ~~~~~~~~~~~~~~~~~~~~~pG~~elL~~Lk~~G~~l~IvSn~~~~~~~~~L~~~gl~~~~Fd~iv~~~~~~~------  216 (1057)
T PLN02919        143 KKRFFEIYLEKYAKPNSGIGFPGALELITQCKNKGLKVAVASSADRIKVDANLAAAGLPLSMFDAIVSADAFEN------  216 (1057)
T ss_pred             HHHHHHHHHHHhhhcccCccCccHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHcCCChhHCCEEEECccccc------
Confidence               2221111111 112347999999999985   789999999999999999999996 78999999987764      


Q ss_pred             CCChhhHHHHHhhhcccCCCCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccch
Q 022360          157 SDDEDDIAFVESAASTTTSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNI  236 (298)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di  236 (298)
                                                                      .||+|++|..++++++++|++|++|||+.+|+
T Consensus       217 ------------------------------------------------~KP~Pe~~~~a~~~lgv~p~e~v~IgDs~~Di  248 (1057)
T PLN02919        217 ------------------------------------------------LKPAPDIFLAAAKILGVPTSECVVIEDALAGV  248 (1057)
T ss_pred             ------------------------------------------------CCCCHHHHHHHHHHcCcCcccEEEEcCCHHHH
Confidence                                                            79999999999999999999999999999999


Q ss_pred             HHHHHcCCeEEEecCCCC-----CCCCCEEeCCHHHH
Q 022360          237 QAGKRVGLDTVLIGKSQR-----VKGADYAFESIHNI  268 (298)
Q Consensus       237 ~~a~~aG~~~v~v~~~~~-----~~~ad~i~~s~~~l  268 (298)
                      ++|+++||.++++.++..     ...++++++++.++
T Consensus       249 ~AA~~aGm~~I~v~~~~~~~~L~~~~a~~vi~~l~el  285 (1057)
T PLN02919        249 QAARAAGMRCIAVTTTLSEEILKDAGPSLIRKDIGNI  285 (1057)
T ss_pred             HHHHHcCCEEEEECCCCCHHHHhhCCCCEEECChHHC
Confidence            999999999999987643     46789999999996

>TIGR00338 serB phosphoserine phosphatase SerB

Probab=99.82  E-value=2.2e-19  Score=157.42  Aligned_cols=199  Identities=17%  Similarity=0.223  Sum_probs=126.1

Q ss_pred             cccCccEEEEeCCCCccCCCccHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHhCCCHHHH-H-Hcc--CCCChhhH
Q 022360           10 AAAKYDCLLFDLDDTLYPYSSGIAAACGQNIKDYMVEKLGIERSKIEDLGNLLYKNYGTTMAGL-R-AIG--YDFDYDDY   85 (298)
Q Consensus        10 ~~~~~k~viFDlDGTL~d~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~-~-~~~--~~~~~~~~   85 (298)
                      .+.++++++|||||||+++..     +.     .+.+..|.+.... ........ -..+.... . ...  ...+.+.+
T Consensus        10 ~~~~~k~iiFD~DGTL~~~~~-----~~-----~l~~~~g~~~~~~-~~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~   77 (219)
T TIGR00338        10 LLRSKKLVVFDMDSTLINAET-----ID-----EIAKIAGVEEEVS-EITERAMR-GELDFKASLRERVALLKGLPVELL   77 (219)
T ss_pred             hhccCCEEEEeCcccCCCchH-----HH-----HHHHHhCCHHHHH-HHHHHHHc-CCCCHHHHHHHHHHHhCCCCHHHH
Confidence            345678999999999999632     22     1344455532221 11111111 01111111 0 110  12223333


Q ss_pred             HHHhhcccCCCCCCCChhHHHHHHhCC---CcEEEEeCCChHHHHHHHHHhCCCCccceeEeecCCCCCCCCCCCCChhh
Q 022360           86 HSFVHGRLPYENLKPDPVLRSLLLSLP---LRKIIFTNADKVHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSDDEDD  162 (298)
Q Consensus        86 ~~~~~~~~~~~~~~~~~g~~~~L~~l~---~~~~ivS~~~~~~~~~~l~~l~l~~~f~~i~~~~~~~~~~~~~~~~~~~~  162 (298)
                      ....      ....++||+.++|+.|+   .+++|+|++....++..++.+++..+|+..+..++...            
T Consensus        78 ~~~~------~~~~~~~g~~~~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~~i~~~~~~~~~~~~~~~------------  139 (219)
T TIGR00338        78 KEVR------ENLPLTEGAEELVKTLKEKGYKVAVISGGFDLFAEHVKDKLGLDAAFANRLEVEDGKL------------  139 (219)
T ss_pred             HHHH------hcCCcCCCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCceEeeEEEEECCEE------------
Confidence            3332      23568999999998874   77999999999999999999999988876554432110            


Q ss_pred             HHHHHhhhcccCCCCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHHc
Q 022360          163 IAFVESAASTTTSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRV  242 (298)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a~~a  242 (298)
                                            .+...++          +..++||+..++.++++++++|++|++|||+.+|+.+|+.+
T Consensus       140 ----------------------~~~~~~~----------~~~~~~k~~~~~~~~~~~~~~~~~~i~iGDs~~Di~aa~~a  187 (219)
T TIGR00338       140 ----------------------TGLVEGP----------IVDASYKGKTLLILLRKEGISPENTVAVGDGANDLSMIKAA  187 (219)
T ss_pred             ----------------------EEEecCc----------ccCCcccHHHHHHHHHHcCCCHHHEEEEECCHHHHHHHHhC
Confidence                                  0000000          00157789999999999999999999999999999999999


Q ss_pred             CCeEEEecCCCCCCCCCEEeCC--HHHHHH
Q 022360          243 GLDTVLIGKSQRVKGADYAFES--IHNIKE  270 (298)
Q Consensus       243 G~~~v~v~~~~~~~~ad~i~~s--~~~l~~  270 (298)
                      |+.+++.+.......|++++.+  +.++..
T Consensus       188 g~~i~~~~~~~~~~~a~~~i~~~~~~~~~~  217 (219)
T TIGR00338       188 GLGIAFNAKPKLQQKADICINKKDLTDILP  217 (219)
T ss_pred             CCeEEeCCCHHHHHhchhccCCCCHHHHHh
Confidence            9998764444346788898774  445443

Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins.

>TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase

Probab=99.82  E-value=2.4e-19  Score=156.39  Aligned_cols=101  Identities=18%  Similarity=0.257  Sum_probs=86.0

Q ss_pred             CCCCChhHHHHHHhCC---CcEEEEeCCChHH--HHHHHHHhCCCCccceeEeecCCCCCCCCCCCCChhhHHHHHhhhc
Q 022360           97 NLKPDPVLRSLLLSLP---LRKIIFTNADKVH--AVKVLSRLGLEDCFEGIICFETLNPTHKNTVSDDEDDIAFVESAAS  171 (298)
Q Consensus        97 ~~~~~~g~~~~L~~l~---~~~~ivS~~~~~~--~~~~l~~l~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  171 (298)
                      ...++||+.++|+.|+   ++++|+||+....  ....+..+++..+|+.++++++.+.                     
T Consensus        92 ~~~~~~~~~~~L~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~l~~~fd~v~~s~~~~~---------------------  150 (211)
T TIGR02247        92 NTKLRPSMMAAIKTLRAKGFKTACITNNFPTDHSAEEALLPGDIMALFDAVVESCLEGL---------------------  150 (211)
T ss_pred             ccccChhHHHHHHHHHHCCCeEEEEeCCCCccchhhhHhhhhhhHhhCCEEEEeeecCC---------------------
Confidence            4678999999999885   7889999986543  3333445678889999999887765                     


Q ss_pred             ccCCCCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHHcCCeEEEecC
Q 022360          172 TTTSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTVLIGK  251 (298)
Q Consensus       172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a~~aG~~~v~v~~  251 (298)
                                                       .||+|.+|..+++++|++|++|++|||+..|+.+|+++|+.++++.+
T Consensus       151 ---------------------------------~KP~p~~~~~~~~~~g~~~~~~l~i~D~~~di~aA~~aG~~~i~v~~  197 (211)
T TIGR02247       151 ---------------------------------RKPDPRIYQLMLERLGVAPEECVFLDDLGSNLKPAAALGITTIKVSD  197 (211)
T ss_pred             ---------------------------------CCCCHHHHHHHHHHcCCCHHHeEEEcCCHHHHHHHHHcCCEEEEECC
Confidence                                             79999999999999999999999999999999999999999996644

These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA.

>PRK09456 ?-D-glucose-1-phosphatase; Provisional

Probab=99.81  E-value=1e-18  Score=151.29  Aligned_cols=119  Identities=16%  Similarity=0.346  Sum_probs=96.4

Q ss_pred             ccCCCChhhHHHHhhcccCCCCCCCChhHHHHHHhCC---CcEEEEeCCChHHHHHHHHH-hCCCCccceeEeecCCCCC
Q 022360           76 IGYDFDYDDYHSFVHGRLPYENLKPDPVLRSLLLSLP---LRKIIFTNADKVHAVKVLSR-LGLEDCFEGIICFETLNPT  151 (298)
Q Consensus        76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~L~~l~---~~~~ivS~~~~~~~~~~l~~-l~l~~~f~~i~~~~~~~~~  151 (298)
                      .+...+.+.+.....+..    ..++||+.++|+.++   ++++|+||+........+.. .++..+|+.++++++.+. 
T Consensus        65 ~~~~~~~~~~~~~~~~~~----~~~~~g~~e~L~~l~~~g~~~~i~Sn~~~~~~~~~~~~~~~l~~~fd~v~~s~~~~~-  139 (199)
T PRK09456         65 MALSLSYEQFAHGWQAVF----VALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEVRAAADHIYLSQDLGM-  139 (199)
T ss_pred             hCCCCCHHHHHHHHHHHH----hccCHHHHHHHHHHHhCCCcEEEEcCCchhhHHHHHhhchhHHHhcCEEEEecccCC-
Confidence            344444444444433321    357899999999884   78999999988877666554 477889999999998876 


Q ss_pred             CCCCCCCChhhHHHHHhhhcccCCCCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcC
Q 022360          152 HKNTVSDDEDDIAFVESAASTTTSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFED  231 (298)
Q Consensus       152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~p~~~i~iGD  231 (298)
                                                                           .||+|+.|..+++++|++|++|++|||
T Consensus       140 -----------------------------------------------------~KP~p~~~~~~~~~~~~~p~~~l~vgD  166 (199)
T PRK09456        140 -----------------------------------------------------RKPEARIYQHVLQAEGFSAADAVFFDD  166 (199)
T ss_pred             -----------------------------------------------------CCCCHHHHHHHHHHcCCChhHeEEeCC
Confidence                                                                 799999999999999999999999999


Q ss_pred             CccchHHHHHcCCeEEEecCC
Q 022360          232 SVRNIQAGKRVGLDTVLIGKS  252 (298)
Q Consensus       232 s~~Di~~a~~aG~~~v~v~~~  252 (298)
                      +..|+.+|+++|+.++++..+
T Consensus       167 ~~~di~aA~~aG~~~i~~~~~  187 (199)
T PRK09456        167 NADNIEAANALGITSILVTDK  187 (199)
T ss_pred             CHHHHHHHHHcCCEEEEecCC
Confidence            999999999999999987654

>TIGR01493 HAD-SF-IA-v2 Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase

Probab=99.80  E-value=1.9e-19  Score=152.29  Aligned_cols=89  Identities=21%  Similarity=0.332  Sum_probs=81.9

Q ss_pred             CCCCCChhHHHHHHhCCCcEEEEeCCChHHHHHHHHHhCCCCccceeEeecCCCCCCCCCCCCChhhHHHHHhhhcccCC
Q 022360           96 ENLKPDPVLRSLLLSLPLRKIIFTNADKVHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSDDEDDIAFVESAASTTTS  175 (298)
Q Consensus        96 ~~~~~~~g~~~~L~~l~~~~~ivS~~~~~~~~~~l~~l~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  175 (298)
                      ....++||+.++|+    +++|+||+....++..++++++..+|+.++++++++.                         
T Consensus        87 ~~~~~~~g~~~~L~----~~~i~Tn~~~~~~~~~l~~~~l~~~fd~v~~~~~~~~-------------------------  137 (175)
T TIGR01493        87 KNLPPWPDSAAALA----RVAILSNASHWAFDQFAQQAGLPWYFDRAFSVDTVRA-------------------------  137 (175)
T ss_pred             hcCCCCCchHHHHH----HHhhhhCCCHHHHHHHHHHCCCHHHHhhhccHhhcCC-------------------------
Confidence            34678999999999    4789999999999999999999999999999887765                         


Q ss_pred             CCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHHc
Q 022360          176 ANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRV  242 (298)
Q Consensus       176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a~~a  242 (298)
                                                   .||+|+.|..+++++|++|++|++|||+.+|+.+|+++
T Consensus       138 -----------------------------~KP~p~~f~~~~~~~~~~p~~~l~vgD~~~Di~~A~~~  175 (175)
T TIGR01493       138 -----------------------------YKPDPVVYELVFDTVGLPPDRVLMVAAHQWDLIGARKF  175 (175)
T ss_pred             -----------------------------CCCCHHHHHHHHHHHCCCHHHeEeEecChhhHHHHhcC
Confidence                                         79999999999999999999999999999999999863

The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that modelling it with a single alignment is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)D, (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only o

>TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548

Probab=99.79  E-value=1.2e-18  Score=150.51  Aligned_cols=88  Identities=25%  Similarity=0.281  Sum_probs=77.3

Q ss_pred             CChhHHHHHHhC---CCcEEEEeCCChHHHHHHHHHhCCCCccceeEeecCCCCCCCCCCCCChhhHHHHHhhhcccCCC
Q 022360          100 PDPVLRSLLLSL---PLRKIIFTNADKVHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSDDEDDIAFVESAASTTTSA  176 (298)
Q Consensus       100 ~~~g~~~~L~~l---~~~~~ivS~~~~~~~~~~l~~l~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  176 (298)
                      +.++..++|+.|   +++++|+||+....++..++++|+..+|+.++++++..                           
T Consensus       107 ~~~~~~~~L~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~f~~~~~~~~~~---------------------------  159 (197)
T TIGR01548       107 TLLTPKGLLRELHRAPKGMAVVTGRPRKDAAKFLTTHGLEILFPVQIWMEDCP---------------------------  159 (197)
T ss_pred             cccCHHHHHHHHHHcCCcEEEECCCCHHHHHHHHHHcCchhhCCEEEeecCCC---------------------------
Confidence            344446666665   47899999999999999999999999999999988654                           


Q ss_pred             CCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHHc
Q 022360          177 NGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRV  242 (298)
Q Consensus       177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a~~a  242 (298)
                                                  .||+|+.+..++++++++|++|++|||+.+|+++|+++
T Consensus       160 ----------------------------~KP~p~~~~~~~~~~~~~~~~~i~vGD~~~Di~aA~~a  197 (197)
T TIGR01548       160 ----------------------------PKPNPEPLILAAKALGVEACHAAMVGDTVDDIITGRKA  197 (197)
T ss_pred             ----------------------------CCcCHHHHHHHHHHhCcCcccEEEEeCCHHHHHHHHhC
Confidence                                        49999999999999999999999999999999999874

All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's.

>TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E

Probab=99.78  E-value=2.7e-18  Score=142.26  Aligned_cols=151  Identities=22%  Similarity=0.272  Sum_probs=109.5

Q ss_pred             EEEEeCCCCccCCCccHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHhCCCHHHHHHccCCCChhhHHHHhhcccCC
Q 022360           16 CLLFDLDDTLYPYSSGIAAACGQNIKDYMVEKLGIERSKIEDLGNLLYKNYGTTMAGLRAIGYDFDYDDYHSFVHGRLPY   95 (298)
Q Consensus        16 ~viFDlDGTL~d~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~   95 (298)
                      +|+||+||||+|+...+..++...+++     .+.....       +....|.....+....     ..+.+...   ..
T Consensus         1 ~iifD~DGTL~d~~~~~~~~~~~~~~~-----~~~~~~~-------~~~~~g~~~~~~~~~~-----~~~~~~~~---~~   60 (154)
T TIGR01549         1 AILFDIDGTLVDSSFAIRRAFEETLEE-----FGEDFQA-------LKALRGLAEELLYRIA-----TSFEELLG---YD   60 (154)
T ss_pred             CeEecCCCcccccHHHHHHHHHHHHHH-----hcccHHH-------HHHHHccChHHHHHHH-----HHHHHHhC---cc
Confidence            489999999999887888887764443     3432211       1112223322222111     11222211   11


Q ss_pred             CCCCCChhHHHHHHhC---CCcEEEEeCCChHHHHHHHHHhCCCCccceeEeecCCCCCCCCCCCCChhhHHHHHhhhcc
Q 022360           96 ENLKPDPVLRSLLLSL---PLRKIIFTNADKVHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSDDEDDIAFVESAAST  172 (298)
Q Consensus        96 ~~~~~~~g~~~~L~~l---~~~~~ivS~~~~~~~~~~l~~l~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  172 (298)
                      ......||+.++|+.|   +++++|+|++....+...++++ +..+|+.+++.++.+                       
T Consensus        61 ~~~~~~~g~~e~l~~L~~~g~~~~i~T~~~~~~~~~~~~~~-l~~~f~~i~~~~~~~-----------------------  116 (154)
T TIGR01549        61 AEEAYIRGAADLLKRLKEAGIKLGIISNGSLRAQKLLLRKH-LGDYFDLILGSDEFG-----------------------  116 (154)
T ss_pred             hhheeccCHHHHHHHHHHCcCeEEEEeCCchHHHHHHHHHH-HHhcCcEEEecCCCC-----------------------
Confidence            2345678999999988   3789999999999999999988 888999998877543                       


Q ss_pred             cCCCCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHHcC
Q 022360          173 TTSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVG  243 (298)
Q Consensus       173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a~~aG  243 (298)
                                                      .||+|+.+.+++++++++| +|++|||+.+|+++|+++|
T Consensus       117 --------------------------------~Kp~~~~~~~~~~~~~~~~-~~l~iGDs~~Di~aa~~aG  154 (154)
T TIGR01549       117 --------------------------------AKPEPEIFLAALESLGLPP-EVLHVGDNLNDIEGARNAG  154 (154)
T ss_pred             --------------------------------CCcCHHHHHHHHHHcCCCC-CEEEEeCCHHHHHHHHHcc
Confidence                                            5999999999999999999 9999999999999999987

HAD subfamilies caused by an overly broad single model.

>PLN02811 hydrolase

Probab=99.77  E-value=4.4e-18  Score=149.71  Aligned_cols=184  Identities=20%  Similarity=0.233  Sum_probs=128.9

Q ss_pred             CCCCccCCCccHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHhCCCHHH----H-HHccCC--CChhhHHHH---hh
Q 022360           21 LDDTLYPYSSGIAAACGQNIKDYMVEKLGIERSKIEDLGNLLYKNYGTTMAG----L-RAIGYD--FDYDDYHSF---VH   90 (298)
Q Consensus        21 lDGTL~d~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~----~-~~~~~~--~~~~~~~~~---~~   90 (298)
                      |||||+|+.+.+..++.+.     .+.+|++....     ......|.+...    + ...+.+  ...+.+...   ..
T Consensus         1 ~DGTL~Ds~~~~~~a~~~~-----~~~~g~~~~~~-----~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   70 (220)
T PLN02811          1 MDGLLLDTEKFYTEVQEKI-----LARYGKTFDWS-----LKAKMMGKKAIEAARIFVEESGLSDSLSPEDFLVEREAML   70 (220)
T ss_pred             CCCcceecHHHHHHHHHHH-----HHHcCCCCCHH-----HHHHccCCCHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHH
Confidence            7999999988888887763     45566653221     112233443321    1 112222  122222221   11


Q ss_pred             cccCCCCCCCChhHHHHHHhCC---CcEEEEeCCChHHHH-HHHHHhCCCCccceeEeec--CCCCCCCCCCCCChhhHH
Q 022360           91 GRLPYENLKPDPVLRSLLLSLP---LRKIIFTNADKVHAV-KVLSRLGLEDCFEGIICFE--TLNPTHKNTVSDDEDDIA  164 (298)
Q Consensus        91 ~~~~~~~~~~~~g~~~~L~~l~---~~~~ivS~~~~~~~~-~~l~~l~l~~~f~~i~~~~--~~~~~~~~~~~~~~~~~~  164 (298)
                      ... .....++||+.++|+.|+   ++++|+|+....... ...++.++.++|+.+++.+  +++.              
T Consensus        71 ~~~-~~~~~l~~gv~e~l~~L~~~g~~~~i~S~~~~~~~~~~~~~~~~l~~~f~~i~~~~~~~~~~--------------  135 (220)
T PLN02811         71 QDL-FPTSDLMPGAERLVRHLHAKGIPIAIATGSHKRHFDLKTQRHGELFSLMHHVVTGDDPEVKQ--------------  135 (220)
T ss_pred             HHH-HhhCCCCccHHHHHHHHHHCCCcEEEEeCCchhhHHHHHcccHHHHhhCCEEEECChhhccC--------------
Confidence            111 234678999999999884   789999998876554 3445557888999999988  5553              


Q ss_pred             HHHhhhcccCCCCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcC---CCCCcEEEEcCCccchHHHHH
Q 022360          165 FVESAASTTTSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIAS---INPQRTLFFEDSVRNIQAGKR  241 (298)
Q Consensus       165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~---i~p~~~i~iGDs~~Di~~a~~  241 (298)
                                                              +||+|++|..++++++   ++|++|++|||+..|+++|++
T Consensus       136 ----------------------------------------~KP~p~~~~~a~~~~~~~~~~~~~~v~IgDs~~di~aA~~  175 (220)
T PLN02811        136 ----------------------------------------GKPAPDIFLAAARRFEDGPVDPGKVLVFEDAPSGVEAAKN  175 (220)
T ss_pred             ----------------------------------------CCCCcHHHHHHHHHhCCCCCCccceEEEeccHhhHHHHHH
Confidence                                                    6999999999999997   999999999999999999999


Q ss_pred             cCCeEEEecCCCC----CCCCCEEeCCHHHHH
Q 022360          242 VGLDTVLIGKSQR----VKGADYAFESIHNIK  269 (298)
Q Consensus       242 aG~~~v~v~~~~~----~~~ad~i~~s~~~l~  269 (298)
                      +|+.++++.++..    ...++++++++.++.
T Consensus       176 aG~~~i~v~~~~~~~~~~~~~d~vi~~~~e~~  207 (220)
T PLN02811        176 AGMSVVMVPDPRLDKSYCKGADQVLSSLLDFK  207 (220)
T ss_pred             CCCeEEEEeCCCCcHhhhhchhhHhcCHhhCC
Confidence            9999999977542    346888889888754

>PLN02954 phosphoserine phosphatase

Probab=99.76  E-value=2.7e-17  Score=144.64  Aligned_cols=201  Identities=15%  Similarity=0.167  Sum_probs=124.7

Q ss_pred             cCccEEEEeCCCCccCCCccHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHhCCCHHH-HHH-cc-CCCChhhHHHH
Q 022360           12 AKYDCLLFDLDDTLYPYSSGIAAACGQNIKDYMVEKLGIERSKIEDLGNLLYKNYGTTMAG-LRA-IG-YDFDYDDYHSF   88 (298)
Q Consensus        12 ~~~k~viFDlDGTL~d~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~-~~~-~~-~~~~~~~~~~~   88 (298)
                      +++|+|+|||||||+++..     +.     .+.+.+|.+...... ... +......... +.. ++ .....+.+...
T Consensus        10 ~~~k~viFDfDGTL~~~~~-----~~-----~~~~~~g~~~~~~~~-~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~   77 (224)
T PLN02954         10 RSADAVCFDVDSTVCVDEG-----ID-----ELAEFCGAGEAVAEW-TAK-AMGGSVPFEEALAARLSLFKPSLSQVEEF   77 (224)
T ss_pred             ccCCEEEEeCCCcccchHH-----HH-----HHHHHcCChHHHHHH-HHH-HHCCCCCHHHHHHHHHHHcCCCHHHHHHH
Confidence            4579999999999999522     21     255556654222111 111 1111112211 111 11 11223444444


Q ss_pred             hhcccCCCCCCCChhHHHHHHhCC---CcEEEEeCCChHHHHHHHHHhCCC--CccceeEeecCCCCCCCCCCCCChhhH
Q 022360           89 VHGRLPYENLKPDPVLRSLLLSLP---LRKIIFTNADKVHAVKVLSRLGLE--DCFEGIICFETLNPTHKNTVSDDEDDI  163 (298)
Q Consensus        89 ~~~~~~~~~~~~~~g~~~~L~~l~---~~~~ivS~~~~~~~~~~l~~l~l~--~~f~~i~~~~~~~~~~~~~~~~~~~~~  163 (298)
                      +..    ....++||+.++|+.++   .+++|+|++....++..++.+|+.  .+|+..+..+..+...|.         
T Consensus        78 ~~~----~~~~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~~l~~~gi~~~~~~~~~~~~~~~g~~~g~---------  144 (224)
T PLN02954         78 LEK----RPPRLSPGIPELVKKLRARGTDVYLVSGGFRQMIAPVAAILGIPPENIFANQILFGDSGEYAGF---------  144 (224)
T ss_pred             HHH----ccCCCCccHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHhCCChhhEEEeEEEEcCCCcEECc---------
Confidence            443    12467899999998874   679999999999999999999996  466554443322211000         


Q ss_pred             HHHHhhhcccCCCCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHHcC
Q 022360          164 AFVESAASTTTSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVG  243 (298)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a~~aG  243 (298)
                                               ....+    .    ..+++|++.+..++++++.  ++|++|||+.+|+.+++++|
T Consensus       145 -------------------------~~~~~----~----~~~~~K~~~i~~~~~~~~~--~~~i~iGDs~~Di~aa~~~~  189 (224)
T PLN02954        145 -------------------------DENEP----T----SRSGGKAEAVQHIKKKHGY--KTMVMIGDGATDLEARKPGG  189 (224)
T ss_pred             -------------------------cCCCc----c----cCCccHHHHHHHHHHHcCC--CceEEEeCCHHHHHhhhcCC
Confidence                                     00000    0    0157788999999998885  68999999999999999988


Q ss_pred             CeEEEecCCC-----CCCCCCEEeCCHHHHHHHh
Q 022360          244 LDTVLIGKSQ-----RVKGADYAFESIHNIKEAI  272 (298)
Q Consensus       244 ~~~v~v~~~~-----~~~~ad~i~~s~~~l~~~l  272 (298)
                      +.++...++.     ....++++++++.+|.+.+
T Consensus       190 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~el~~~~  223 (224)
T PLN02954        190 ADLFIGYGGVQVREAVAAKADWFVTDFQDLIEVL  223 (224)
T ss_pred             CCEEEecCCCccCHHHHhcCCEEECCHHHHHHhh
Confidence            8876543322     1346899999999987754

>PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated

Probab=99.76  E-value=1.1e-17  Score=142.92  Aligned_cols=125  Identities=19%  Similarity=0.224  Sum_probs=95.4

Q ss_pred             CCCChhHHHHHHhCC---CcEEEEeCCCh---------------HHHHHHHHHhCCCCccceeEeecCCCCCCCCCCCCC
Q 022360           98 LKPDPVLRSLLLSLP---LRKIIFTNADK---------------VHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSDD  159 (298)
Q Consensus        98 ~~~~~g~~~~L~~l~---~~~~ivS~~~~---------------~~~~~~l~~l~l~~~f~~i~~~~~~~~~~~~~~~~~  159 (298)
                      +.++||+.++|++|+   ++++|+||+..               ..+...++++++  .|+.++.+.....-        
T Consensus        28 ~~~~pgv~e~L~~Lk~~g~~l~I~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~--~f~~i~~~~~~~~~--------   97 (181)
T PRK08942         28 WIPIPGSIEAIARLKQAGYRVVVATNQSGIARGLFTEAQLNALHEKMDWSLADRGG--RLDGIYYCPHHPED--------   97 (181)
T ss_pred             eEECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHcCC--ccceEEECCCCCCC--------
Confidence            467789999988884   78999999863               234455666676  37777654321100        


Q ss_pred             hhhHHHHHhhhcccCCCCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccchHHH
Q 022360          160 EDDIAFVESAASTTTSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAG  239 (298)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a  239 (298)
                                                           ..    ...||+|.++..+++++|++|++|++|||+.+|+.+|
T Consensus        98 -------------------------------------~~----~~~KP~p~~~~~~~~~l~~~~~~~~~VgDs~~Di~~A  136 (181)
T PRK08942         98 -------------------------------------GC----DCRKPKPGMLLSIAERLNIDLAGSPMVGDSLRDLQAA  136 (181)
T ss_pred             -------------------------------------CC----cCCCCCHHHHHHHHHHcCCChhhEEEEeCCHHHHHHH
Confidence                                                 00    0169999999999999999999999999999999999


Q ss_pred             HHcCCeEEEecCCCC-----CCCC--CEEeCCHHHHHHHhH
Q 022360          240 KRVGLDTVLIGKSQR-----VKGA--DYAFESIHNIKEAIP  273 (298)
Q Consensus       240 ~~aG~~~v~v~~~~~-----~~~a--d~i~~s~~~l~~~l~  273 (298)
                      +++|+.++++.++..     ...+  ++++.++.++.+++.
T Consensus       137 ~~aG~~~i~v~~g~~~~~~~~~~~~~~~ii~~l~el~~~l~  177 (181)
T PRK08942        137 AAAGVTPVLVRTGKGVTTLAEGAAPGTWVLDSLADLPQALK  177 (181)
T ss_pred             HHCCCeEEEEcCCCCchhhhcccCCCceeecCHHHHHHHHH
Confidence            999999999976542     3345  899999999887764

>TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal

Probab=99.75  E-value=3.7e-17  Score=140.86  Aligned_cols=112  Identities=14%  Similarity=0.135  Sum_probs=89.2

Q ss_pred             CCCChhHHHHHHhCC---CcEEEEeCCChHHHHHHHHHhCCCCccceeEeecCCCCCCCCCCCCChhhHHHHHhhhcccC
Q 022360           98 LKPDPVLRSLLLSLP---LRKIIFTNADKVHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSDDEDDIAFVESAASTTT  174 (298)
Q Consensus        98 ~~~~~g~~~~L~~l~---~~~~ivS~~~~~~~~~~l~~l~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  174 (298)
                      ..++||+.++|+.|+   ++++|+|++....++..++++|+..+|+..+.+++.+.+.+                     
T Consensus        79 ~~~~~g~~e~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~g~~~~~~~~~~~~~~g~~~p---------------------  137 (201)
T TIGR01491        79 ISLRDYAEELVRWLKEKGLKTAIVSGGIMCLAKKVAEKLNPDYVYSNELVFDEKGFIQP---------------------  137 (201)
T ss_pred             CCCCccHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHhCCCeEEEEEEEEcCCCeEec---------------------
Confidence            578999999999884   78999999999999999999999888887776655443100                     


Q ss_pred             CCCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHHcCCeEEEecCCC
Q 022360          175 SANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTVLIGKSQ  253 (298)
Q Consensus       175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a~~aG~~~v~v~~~~  253 (298)
                                        .+++..     ...+|+..+..+++++++++++|++|||+.+|+.+++.+|+.++..+.+.
T Consensus       138 ------------------~~~~~~-----~~~~k~~~~~~~~~~~~~~~~~~i~iGDs~~D~~~a~~ag~~~a~~~~~~  193 (201)
T TIGR01491       138 ------------------DGIVRV-----TFDNKGEAVERLKRELNPSLTETVAVGDSKNDLPMFEVADISISLGDEGH  193 (201)
T ss_pred             ------------------ceeeEE-----ccccHHHHHHHHHHHhCCCHHHEEEEcCCHhHHHHHHhcCCeEEECCCcc
Confidence                              000000     13566789999999999999999999999999999999999988766554

This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog.

>PRK11133 serB phosphoserine phosphatase; Provisional

Probab=99.74  E-value=3.5e-17  Score=151.76  Aligned_cols=129  Identities=16%  Similarity=0.134  Sum_probs=97.9

Q ss_pred             CCCCChhHHHHHHhCC---CcEEEEeCCChHHHHHHHHHhCCCCccceeEeecCCCCCCCCCCCCChhhHHHHHhhhccc
Q 022360           97 NLKPDPVLRSLLLSLP---LRKIIFTNADKVHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSDDEDDIAFVESAASTT  173 (298)
Q Consensus        97 ~~~~~~g~~~~L~~l~---~~~~ivS~~~~~~~~~~l~~l~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  173 (298)
                      .+++.||+.++|+.++   .+++|+|++.....+..++++++...+...+...+...                       
T Consensus       179 ~l~l~pGa~elL~~Lk~~G~~~aIvSgg~~~~~~~l~~~Lgld~~~an~lei~dg~l-----------------------  235 (322)
T PRK11133        179 NLPLMPGLTELVLKLQALGWKVAIASGGFTYFADYLRDKLRLDAAVANELEIMDGKL-----------------------  235 (322)
T ss_pred             hCCCChhHHHHHHHHHHcCCEEEEEECCcchhHHHHHHHcCCCeEEEeEEEEECCEE-----------------------
Confidence            3678999999988875   78999999999989999999998765544332221110                       


Q ss_pred             CCCCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHHcCCeEEEecCCC
Q 022360          174 TSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTVLIGKSQ  253 (298)
Q Consensus       174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a~~aG~~~v~v~~~~  253 (298)
                                 .+...+.     ..     .++||++.++.+++++|+++++|++|||+.||+.|++.+|+++++-+.+.
T Consensus       236 -----------tg~v~g~-----iv-----~~k~K~~~L~~la~~lgi~~~qtIaVGDg~NDl~m~~~AGlgiA~nAkp~  294 (322)
T PRK11133        236 -----------TGNVLGD-----IV-----DAQYKADTLTRLAQEYEIPLAQTVAIGDGANDLPMIKAAGLGIAYHAKPK  294 (322)
T ss_pred             -----------EeEecCc-----cC-----CcccHHHHHHHHHHHcCCChhhEEEEECCHHHHHHHHHCCCeEEeCCCHH
Confidence                       0000000     00     15899999999999999999999999999999999999999999966666


Q ss_pred             CCCCCCEEeCCHHHHHH
Q 022360          254 RVKGADYAFESIHNIKE  270 (298)
Q Consensus       254 ~~~~ad~i~~s~~~l~~  270 (298)
                      .+..|++++++ .+|..
T Consensus       295 Vk~~Ad~~i~~-~~l~~  310 (322)
T PRK11133        295 VNEQAQVTIRH-ADLMG  310 (322)
T ss_pred             HHhhCCEEecC-cCHHH
Confidence            78899999973 33433

>PRK13582 thrH phosphoserine phosphatase; Provisional

Probab=99.74  E-value=2.1e-17  Score=143.21  Aligned_cols=196  Identities=14%  Similarity=0.098  Sum_probs=123.2

Q ss_pred             ccEEEEeCCCCccCCCccHHHHHHHHHHHHHHHHhCCChhHHHHHH-HHHHHHhCCCHHHHHHccCCCChhhHHHHhhcc
Q 022360           14 YDCLLFDLDDTLYPYSSGIAAACGQNIKDYMVEKLGIERSKIEDLG-NLLYKNYGTTMAGLRAIGYDFDYDDYHSFVHGR   92 (298)
Q Consensus        14 ~k~viFDlDGTL~d~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~   92 (298)
                      +++|+|||||||++  .    .+.     .+.+..|.+........ ..+....+.....+..  ...+.+.+.....  
T Consensus         1 ~~~v~FD~DGTL~~--~----~~~-----~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~--~~~~~~~i~~~~~--   65 (205)
T PRK13582          1 MEIVCLDLEGVLVP--E----IWI-----AFAEKTGIPELRATTRDIPDYDVLMKQRLDILDE--HGLGLADIQEVIA--   65 (205)
T ss_pred             CeEEEEeCCCCChh--h----HHH-----HHHHHcCChHHHHHhcCCCCHHHHHHHHHHHHHH--cCCCHHHHHHHHH--
Confidence            47899999999994  1    222     14455565432100000 0001111111111221  1233444544433  


Q ss_pred             cCCCCCCCChhHHHHHHhCC--CcEEEEeCCChHHHHHHHHHhCCCCccceeEeecCCCCCCCCCCCCChhhHHHHHhhh
Q 022360           93 LPYENLKPDPVLRSLLLSLP--LRKIIFTNADKVHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSDDEDDIAFVESAA  170 (298)
Q Consensus        93 ~~~~~~~~~~g~~~~L~~l~--~~~~ivS~~~~~~~~~~l~~l~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~  170 (298)
                          ...++||+.++|..++  ++++|+|++....++..++++++..+|+..+...+.+...|                 
T Consensus        66 ----~~~~~pg~~e~L~~L~~~~~~~IvS~~~~~~~~~~l~~~gl~~~f~~~~~~~~~~~i~~-----------------  124 (205)
T PRK13582         66 ----TLDPLPGAVEFLDWLRERFQVVILSDTFYEFAGPLMRQLGWPTLFCHSLEVDEDGMITG-----------------  124 (205)
T ss_pred             ----hCCCCCCHHHHHHHHHhcCCEEEEeCCcHHHHHHHHHHcCCchhhcceEEECCCCeEEC-----------------
Confidence                3577899999999886  67899999999999999999999988877665543321100                 


Q ss_pred             cccCCCCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHHcCCeEEEec
Q 022360          171 STTTSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTVLIG  250 (298)
Q Consensus       171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a~~aG~~~v~v~  250 (298)
                                                 .      .+++|.....++++++..+++|++|||+.+|+.+++++|+++.+ +
T Consensus       125 ---------------------------~------~~~~p~~k~~~l~~~~~~~~~~v~iGDs~~D~~~~~aa~~~v~~-~  170 (205)
T PRK13582        125 ---------------------------Y------DLRQPDGKRQAVKALKSLGYRVIAAGDSYNDTTMLGEADAGILF-R  170 (205)
T ss_pred             ---------------------------c------cccccchHHHHHHHHHHhCCeEEEEeCCHHHHHHHHhCCCCEEE-C
Confidence                                       0      11222334555566666778999999999999999999987653 3


Q ss_pred             CCCC--CCCCCE-EeCCHHHHHHHhHHhhccC
Q 022360          251 KSQR--VKGADY-AFESIHNIKEAIPELWESD  279 (298)
Q Consensus       251 ~~~~--~~~ad~-i~~s~~~l~~~l~~~~~~~  279 (298)
                      .+..  ...+++ +++++.+|.+.|.+.+.+.
T Consensus       171 ~~~~~~~~~~~~~~~~~~~el~~~l~~~~~~~  202 (205)
T PRK13582        171 PPANVIAEFPQFPAVHTYDELLAAIDKASARA  202 (205)
T ss_pred             CCHHHHHhCCcccccCCHHHHHHHHHHHHhhc
Confidence            3322  234555 8999999999998887653

>PRK06769 hypothetical protein; Validated

Probab=99.73  E-value=2.8e-17  Score=139.66  Aligned_cols=121  Identities=19%  Similarity=0.218  Sum_probs=93.2

Q ss_pred             CCCChhHHHHHHhCC---CcEEEEeCCChH--------HHHHHHHHhCCCCccceeE-eecCCCCCCCCCCCCChhhHHH
Q 022360           98 LKPDPVLRSLLLSLP---LRKIIFTNADKV--------HAVKVLSRLGLEDCFEGII-CFETLNPTHKNTVSDDEDDIAF  165 (298)
Q Consensus        98 ~~~~~g~~~~L~~l~---~~~~ivS~~~~~--------~~~~~l~~l~l~~~f~~i~-~~~~~~~~~~~~~~~~~~~~~~  165 (298)
                      ..++||+.++|++|+   ++++|+||....        .....++.+|+..+|..+. ..++.+.               
T Consensus        27 ~~~~pgv~e~L~~Lk~~G~~l~I~Tn~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~---------------   91 (173)
T PRK06769         27 FTLFPFTKASLQKLKANHIKIFSFTNQPGIADGIATIADFVQELKGFGFDDIYLCPHKHGDGCEC---------------   91 (173)
T ss_pred             eEECCCHHHHHHHHHHCCCEEEEEECCchhcCCcCCHHHHHHHHHhCCcCEEEECcCCCCCCCCC---------------
Confidence            457889999998884   789999997642        1333466666655543332 2222222               


Q ss_pred             HHhhhcccCCCCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHHcCCe
Q 022360          166 VESAASTTTSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLD  245 (298)
Q Consensus       166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a~~aG~~  245 (298)
                                                             .||+|..+.+++++++++|++|++|||+.+|+.+|+++|+.
T Consensus        92 ---------------------------------------~KP~p~~~~~~~~~l~~~p~~~i~IGD~~~Di~aA~~aGi~  132 (173)
T PRK06769         92 ---------------------------------------RKPSTGMLLQAAEKHGLDLTQCAVIGDRWTDIVAAAKVNAT  132 (173)
T ss_pred             ---------------------------------------CCCCHHHHHHHHHHcCCCHHHeEEEcCCHHHHHHHHHCCCe
Confidence                                                   69999999999999999999999999999999999999999


Q ss_pred             EEEecCCCC------------CCCCCEEeCCHHHHHHHh
Q 022360          246 TVLIGKSQR------------VKGADYAFESIHNIKEAI  272 (298)
Q Consensus       246 ~v~v~~~~~------------~~~ad~i~~s~~~l~~~l  272 (298)
                      ++++.++..            ...+++++.++.+|.++|
T Consensus       133 ~i~v~~g~~~~~~~~~~~~l~~~~~~~~~~~~~el~~~l  171 (173)
T PRK06769        133 TILVRTGAGYDALHTYRDKWAHIEPNYIAENFEDAVNWI  171 (173)
T ss_pred             EEEEecCCCchhhhhhhcccccCCCcchhhCHHHHHHHH
Confidence            999977541            345889999999987764

>TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase

Probab=99.73  E-value=4.8e-17  Score=138.45  Aligned_cols=127  Identities=17%  Similarity=0.180  Sum_probs=93.1

Q ss_pred             CCCChhHHHHHHhCC---CcEEEEeCCCh---------------HHHHHHHHHhCCCCccceeEeecCCCCCCCCCCCCC
Q 022360           98 LKPDPVLRSLLLSLP---LRKIIFTNADK---------------VHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSDD  159 (298)
Q Consensus        98 ~~~~~g~~~~L~~l~---~~~~ivS~~~~---------------~~~~~~l~~l~l~~~f~~i~~~~~~~~~~~~~~~~~  159 (298)
                      +.++||+.++|++|+   ++++|+||...               ..+...+.++++.  |+.++.+.....- .      
T Consensus        25 ~~~~pgv~e~L~~Lk~~G~~l~i~TN~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--~~~i~~~~~~~~~-~------   95 (176)
T TIGR00213        25 FEFIDGVIDALRELKKMGYALVLVTNQSGIARGYFTEAQFEQLTEWMDWSLAERDVD--LDGIYYCPHHPEG-V------   95 (176)
T ss_pred             eEECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHcCCC--ccEEEECCCCCcc-c------
Confidence            467788999988874   78999999874               3344556666665  6676654321100 0      


Q ss_pred             hhhHHHHHhhhcccCCCCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccchHHH
Q 022360          160 EDDIAFVESAASTTTSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAG  239 (298)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a  239 (298)
                                                +.          +...-.++||+|.+|..++++++++|++|+||||+.+|+++|
T Consensus        96 --------------------------~~----------~~~~~~~~KP~p~~~~~a~~~~~~~~~~~v~VGDs~~Di~aA  139 (176)
T TIGR00213        96 --------------------------EE----------FRQVCDCRKPKPGMLLQARKELHIDMAQSYMVGDKLEDMQAG  139 (176)
T ss_pred             --------------------------cc----------ccCCCCCCCCCHHHHHHHHHHcCcChhhEEEEcCCHHHHHHH
Confidence                                      00          000000269999999999999999999999999999999999


Q ss_pred             HHcCCeE-EEecCCCC-----CCCCCEEeCCHHHHH
Q 022360          240 KRVGLDT-VLIGKSQR-----VKGADYAFESIHNIK  269 (298)
Q Consensus       240 ~~aG~~~-v~v~~~~~-----~~~ad~i~~s~~~l~  269 (298)
                      +++|+.+ +++.++..     ...|+++++++.+|.
T Consensus       140 ~~aG~~~~i~v~~g~~~~~~~~~~ad~~i~~~~el~  175 (176)
T TIGR00213       140 VAAKVKTNVLVRTGKPITPEAENIADWVLNSLADLP  175 (176)
T ss_pred             HHCCCcEEEEEecCCcccccccccCCEEeccHHHhh
Confidence            9999998 78877653     246999999999875

This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812).

>KOG3085 consensus Predicted hydrolase (HAD superfamily) [General function prediction only]

Probab=99.71  E-value=1.6e-16  Score=139.78  Aligned_cols=102  Identities=21%  Similarity=0.248  Sum_probs=89.1

Q ss_pred             CCCCChhHHHHHHhCC---CcEEEEeCCChHHHHHHHHHhCCCCccceeEeecCCCCCCCCCCCCChhhHHHHHhhhccc
Q 022360           97 NLKPDPVLRSLLLSLP---LRKIIFTNADKVHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSDDEDDIAFVESAASTT  173 (298)
Q Consensus        97 ~~~~~~g~~~~L~~l~---~~~~ivS~~~~~~~~~~l~~l~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  173 (298)
                      .....++..++|++++   ..++++||.+... +..+..+++..+||.++.+...+.                       
T Consensus       111 ~~~~~~~~~~~lq~lR~~g~~l~iisN~d~r~-~~~l~~~~l~~~fD~vv~S~e~g~-----------------------  166 (237)
T KOG3085|consen  111 AWKYLDGMQELLQKLRKKGTILGIISNFDDRL-RLLLLPLGLSAYFDFVVESCEVGL-----------------------  166 (237)
T ss_pred             CceeccHHHHHHHHHHhCCeEEEEecCCcHHH-HHHhhccCHHHhhhhhhhhhhhcc-----------------------
Confidence            3455677778888886   4567889988774 488888999999999999999887                       


Q ss_pred             CCCCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCc-cchHHHHHcCCeEEEecCC
Q 022360          174 TSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSV-RNIQAGKRVGLDTVLIGKS  252 (298)
Q Consensus       174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~p~~~i~iGDs~-~Di~~a~~aG~~~v~v~~~  252 (298)
                                                     .||+|.+|+.+++++++.|++|++|||+. ||+++|+++||.++.+..+
T Consensus       167 -------------------------------~KPDp~If~~al~~l~v~Pee~vhIgD~l~nD~~gA~~~G~~ailv~~~  215 (237)
T KOG3085|consen  167 -------------------------------EKPDPRIFQLALERLGVKPEECVHIGDLLENDYEGARNLGWHAILVDNS  215 (237)
T ss_pred             -------------------------------CCCChHHHHHHHHHhCCChHHeEEecCccccccHhHHHcCCEEEEEccc
Confidence                                           79999999999999999999999999999 9999999999999988654


Q ss_pred             C
Q 022360          253 Q  253 (298)
Q Consensus       253 ~  253 (298)
                      .
T Consensus       216 ~  216 (237)
T KOG3085|consen  216 I  216 (237)
T ss_pred             c
Confidence            3

>PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed

Probab=99.70  E-value=9.9e-17  Score=141.06  Aligned_cols=125  Identities=11%  Similarity=0.128  Sum_probs=91.4

Q ss_pred             CCCCChhHHHHHHhCC---CcEEEEeCCChHHHHHHHHHhCCCC--cc--ceeEeecCCCCCCCCCCCCChhhHHHHHhh
Q 022360           97 NLKPDPVLRSLLLSLP---LRKIIFTNADKVHAVKVLSRLGLED--CF--EGIICFETLNPTHKNTVSDDEDDIAFVESA  169 (298)
Q Consensus        97 ~~~~~~g~~~~L~~l~---~~~~ivS~~~~~~~~~~l~~l~l~~--~f--~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~  169 (298)
                      ...++||+.++|+.++   ++++|+|++...+++.+++++ +..  ++  +..+..+....                   
T Consensus        72 ~~~l~pG~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~-~~~~~i~~n~~~~~~~~~~~-------------------  131 (219)
T PRK09552         72 TAEIREGFHEFVQFVKENNIPFYVVSGGMDFFVYPLLQGL-IPKEQIYCNGSDFSGEYITI-------------------  131 (219)
T ss_pred             CCCcCcCHHHHHHHHHHcCCeEEEECCCcHHHHHHHHHHh-CCcCcEEEeEEEecCCeeEE-------------------
Confidence            3678999999998874   789999999999999999988 643  22  11122111110                   


Q ss_pred             hcccCCCCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHH----------HHHHHHHcCCCCCcEEEEcCCccchHHH
Q 022360          170 ASTTTSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELA----------IEKALKIASINPQRTLFFEDSVRNIQAG  239 (298)
Q Consensus       170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~----------~~~~l~~l~i~p~~~i~iGDs~~Di~~a  239 (298)
                                                         .||.|..          ...++++++..+.+|+||||+.+|+.+|
T Consensus       132 -----------------------------------~kp~p~~~~~~~~~~~~K~~~l~~~~~~~~~~i~iGDs~~Di~aa  176 (219)
T PRK09552        132 -----------------------------------TWPHPCDEHCQNHCGCCKPSLIRKLSDTNDFHIVIGDSITDLEAA  176 (219)
T ss_pred             -----------------------------------eccCCccccccccCCCchHHHHHHhccCCCCEEEEeCCHHHHHHH
Confidence                                               2333322          3467788899999999999999999999


Q ss_pred             HHcCCeEEEecC--C--CCCCCCCEEeCCHHHHHHHhHHhhc
Q 022360          240 KRVGLDTVLIGK--S--QRVKGADYAFESIHNIKEAIPELWE  277 (298)
Q Consensus       240 ~~aG~~~v~v~~--~--~~~~~ad~i~~s~~~l~~~l~~~~~  277 (298)
                      +++|+..+ -..  .  .....+.+.++++.|+.+.|+++++
T Consensus       177 ~~Ag~~~a-~~~l~~~~~~~~~~~~~~~~f~ei~~~l~~~~~  217 (219)
T PRK09552        177 KQADKVFA-RDFLITKCEELGIPYTPFETFHDVQTELKHLLE  217 (219)
T ss_pred             HHCCccee-HHHHHHHHHHcCCCccccCCHHHHHHHHHHHhc
Confidence            99999544 111  1  1356688899999999999998875

>TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain

Probab=99.68  E-value=7.7e-17  Score=133.25  Aligned_cols=99  Identities=26%  Similarity=0.385  Sum_probs=77.5

Q ss_pred             CCChhHHHHHHhCC---CcEEEEeCCCh---------------HHHHHHHHHhCCCCccceeEe----ecCCCCCCCCCC
Q 022360           99 KPDPVLRSLLLSLP---LRKIIFTNADK---------------VHAVKVLSRLGLEDCFEGIIC----FETLNPTHKNTV  156 (298)
Q Consensus        99 ~~~~g~~~~L~~l~---~~~~ivS~~~~---------------~~~~~~l~~l~l~~~f~~i~~----~~~~~~~~~~~~  156 (298)
                      .++||+.++|+.|+   ++++|+||+..               ..+...++++++... ..++.    .+..+.      
T Consensus        27 ~~~~g~~~~l~~Lk~~g~~~~I~Sn~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-~~~~~~~~~~~~~~~------   99 (147)
T TIGR01656        27 QLRPGAVPALLTLRAAGYTVVVVTNQSGIGRGYFSAEAFRAPNGRVLELLRQLGVAVD-GVLFCPHHPADNCSC------   99 (147)
T ss_pred             EEcCChHHHHHHHHHCCCEEEEEeCCCcccCCcCCHHHHHHHHHHHHHHHHhCCCcee-EEEECCCCCCCCCCC------
Confidence            56788888888774   78999999873               456677788887521 11111    122221      


Q ss_pred             CCChhhHHHHHhhhcccCCCCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccch
Q 022360          157 SDDEDDIAFVESAASTTTSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNI  236 (298)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di  236 (298)
                                                                      .||+|++++.++++++++|++|++|||+..|+
T Consensus       100 ------------------------------------------------~KP~~~~~~~~~~~~~~~~~e~i~IGDs~~Di  131 (147)
T TIGR01656       100 ------------------------------------------------RKPKPGLILEALKRLGVDASRSLVVGDRLRDL  131 (147)
T ss_pred             ------------------------------------------------CCCCHHHHHHHHHHcCCChHHEEEEcCCHHHH
Confidence                                                            69999999999999999999999999999999


Q ss_pred             HHHHHcCCeEEEecCC
Q 022360          237 QAGKRVGLDTVLIGKS  252 (298)
Q Consensus       237 ~~a~~aG~~~v~v~~~  252 (298)
                      ++|+++|+.++++..+
T Consensus       132 ~~A~~~Gi~~v~i~~~  147 (147)
T TIGR01656       132 QAARNAGLAAVLLVDG  147 (147)
T ss_pred             HHHHHCCCCEEEecCC
Confidence            9999999999998754

This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3.

>KOG2914 consensus Predicted haloacid-halidohydrolase and related hydrolases [General function prediction only]

Probab=99.67  E-value=7.9e-16  Score=134.79  Aligned_cols=194  Identities=21%  Similarity=0.230  Sum_probs=141.9

Q ss_pred             cCccEEEEeCCCCccCCCccHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHhCCCHHHH-H----HccCCCChhhHH
Q 022360           12 AKYDCLLFDLDDTLYPYSSGIAAACGQNIKDYMVEKLGIERSKIEDLGNLLYKNYGTTMAGL-R----AIGYDFDYDDYH   86 (298)
Q Consensus        12 ~~~k~viFDlDGTL~d~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~-~----~~~~~~~~~~~~   86 (298)
                      ..+.+++||+||||+++...+...++.     +..++|...+....     ....|...... .    ......+.+++.
T Consensus         8 ~~~~~~lfD~dG~lvdte~~y~~~~~~-----~~~~ygk~~~~~~~-----~~~mG~~~~eaa~~~~~~~~dp~s~ee~~   77 (222)
T KOG2914|consen    8 LKVSACLFDMDGTLVDTEDLYTEAWQE-----LLDRYGKPYPWDVK-----VKSMGKRTSEAARLFVKKLPDPVSREEFN   77 (222)
T ss_pred             cceeeEEEecCCcEEecHHHHHHHHHH-----HHHHcCCCChHHHH-----HHHcCCCHHHHHHHHHhhcCCCCCHHHHH
Confidence            457899999999999988888887775     56666764444211     22344432222 1    234566677766


Q ss_pred             HHhhccc--CCCCCCCChhHHHHHHhCC---CcEEEEeCCChHHHHHHHHHhC-CCCccceeEeecCCCCCCCCCCCCCh
Q 022360           87 SFVHGRL--PYENLKPDPVLRSLLLSLP---LRKIIFTNADKVHAVKVLSRLG-LEDCFEGIICFETLNPTHKNTVSDDE  160 (298)
Q Consensus        87 ~~~~~~~--~~~~~~~~~g~~~~L~~l~---~~~~ivS~~~~~~~~~~l~~l~-l~~~f~~i~~~~~~~~~~~~~~~~~~  160 (298)
                      ...+...  ......+.||+..++..|+   +++.++|+.+........++++ +...|..++.+++...          
T Consensus        78 ~e~~~~~~~~~~~~~~~PGa~kLv~~L~~~gip~alat~s~~~~~~~k~~~~~~~~~~f~~~v~~d~~~v----------  147 (222)
T KOG2914|consen   78 KEEEEILDRLFMNSILMPGAEKLVNHLKNNGIPVALATSSTSASFELKISRHEDIFKNFSHVVLGDDPEV----------  147 (222)
T ss_pred             HHHHHHHHHhccccccCCcHHHHHHHHHhCCCCeeEEecCCcccHHHHHHHhhHHHHhcCCCeecCCccc----------
Confidence            5543322  1356788899999999885   7899999999988888887776 6777888887433322          


Q ss_pred             hhHHHHHhhhcccCCCCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCCC-CcEEEEcCCccchHHH
Q 022360          161 DDIAFVESAASTTTSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINP-QRTLFFEDSVRNIQAG  239 (298)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~p-~~~i~iGDs~~Di~~a  239 (298)
                                                            +    .+||+|++|..+++++|..| +.|++|+|+.+.+++|
T Consensus       148 --------------------------------------~----~gKP~Pdi~l~A~~~l~~~~~~k~lVfeds~~Gv~aa  185 (222)
T KOG2914|consen  148 --------------------------------------K----NGKPDPDIYLKAAKRLGVPPPSKCLVFEDSPVGVQAA  185 (222)
T ss_pred             --------------------------------------c----CCCCCchHHHHHHHhcCCCCccceEEECCCHHHHHHH
Confidence                                                  1    17999999999999999998 9999999999999999


Q ss_pred             HHcCCeEEEecCCCC----CCCCCEEeCCHHH
Q 022360          240 KRVGLDTVLIGKSQR----VKGADYAFESIHN  267 (298)
Q Consensus       240 ~~aG~~~v~v~~~~~----~~~ad~i~~s~~~  267 (298)
                      +++|+.+++++....    ...++.+++++.+
T Consensus       186 ~aagm~vi~v~~~~~~~~~~~~~~~~~~~~~~  217 (222)
T KOG2914|consen  186 KAAGMQVVGVATPDLSNLFSAGATLILESLED  217 (222)
T ss_pred             HhcCCeEEEecCCCcchhhhhccceecccccc
Confidence            999999999977432    4556666665544

>TIGR01691 enolase-ppase 2,3-diketo-5-methylthio-1-phosphopentane phosphatase

Probab=99.66  E-value=4.9e-15  Score=130.44  Aligned_cols=102  Identities=18%  Similarity=0.226  Sum_probs=87.3

Q ss_pred             CCCCCChhHHHHHHhCC---CcEEEEeCCChHHHHHHHHHh---CCCCccceeEeecCCCCCCCCCCCCChhhHHHHHhh
Q 022360           96 ENLKPDPVLRSLLLSLP---LRKIIFTNADKVHAVKVLSRL---GLEDCFEGIICFETLNPTHKNTVSDDEDDIAFVESA  169 (298)
Q Consensus        96 ~~~~~~~g~~~~L~~l~---~~~~ivS~~~~~~~~~~l~~l---~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~  169 (298)
                      ....++||+.++|+.|+   ++++|+||+....++..+++.   ++.++|+..+.. ..+                    
T Consensus        92 ~~~~lypgv~e~L~~Lk~~G~~l~I~Sn~s~~~~~~~~~~~~~~~L~~~f~~~fd~-~~g--------------------  150 (220)
T TIGR01691        92 LTSHLYPDVPPALEAWLQLGLRLAVYSSGSVPAQKLLFGHSDAGNLTPYFSGYFDT-TVG--------------------  150 (220)
T ss_pred             cccCcCcCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHhhccccchhhhcceEEEe-Ccc--------------------
Confidence            34678999999999984   789999999999888888876   577778776632 121                    


Q ss_pred             hcccCCCCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHHcCCeEEEe
Q 022360          170 ASTTTSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTVLI  249 (298)
Q Consensus       170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a~~aG~~~v~v  249 (298)
                                                         .||+|+.|.++++++|++|++|++|||+..|+++|+++|+.++++
T Consensus       151 -----------------------------------~KP~p~~y~~i~~~lgv~p~e~lfVgDs~~Di~AA~~AG~~ti~v  195 (220)
T TIGR01691       151 -----------------------------------LKTEAQSYVKIAGQLGSPPREILFLSDIINELDAARKAGLHTGQL  195 (220)
T ss_pred             -----------------------------------cCCCHHHHHHHHHHhCcChhHEEEEeCCHHHHHHHHHcCCEEEEE
Confidence                                               699999999999999999999999999999999999999999998


Q ss_pred             cCCC
Q 022360          250 GKSQ  253 (298)
Q Consensus       250 ~~~~  253 (298)
                      .++.
T Consensus       196 ~r~g  199 (220)
T TIGR01691       196 VRPG  199 (220)
T ss_pred             ECCC
Confidence            6654

This enzyme is the enolase-phosphatase of methionine salvage, a pathway that regenerates methionine from methylthioadenosine (MTA). Adenosylmethionine (AdoMet) is a donor of different moieties for various processes, including methylation reactions. Use of AdoMet for spermidine biosynthesis, which leads to polyamine biosynthesis, leaves MTA as a by-product that must be cleared. In Bacillus subtilis and related species, this single protein is replaced by separate enzymes with enolase and phosphatase activities.

>TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA

Probab=99.65  E-value=1.4e-15  Score=123.06  Aligned_cols=94  Identities=26%  Similarity=0.387  Sum_probs=77.8

Q ss_pred             CCChhHHHHHHhC---CCcEEEEeCCC--------hHHHHHHHHHhCCCCccceeEeecCCCCCCCCCCCCChhhHHHHH
Q 022360           99 KPDPVLRSLLLSL---PLRKIIFTNAD--------KVHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSDDEDDIAFVE  167 (298)
Q Consensus        99 ~~~~g~~~~L~~l---~~~~~ivS~~~--------~~~~~~~l~~l~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~  167 (298)
                      .++|++.++|+.|   +++++++||+.        ...++..++++++.  ++.++.+.  +.                 
T Consensus        25 ~~~~~v~~~l~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~~l~~~~l~--~~~~~~~~--~~-----------------   83 (132)
T TIGR01662        25 ILYPEVPDALAELKEAGYKVVIVTNQSGIGRGKFSSGRVARRLEELGVP--IDVLYACP--HC-----------------   83 (132)
T ss_pred             eeCCCHHHHHHHHHHCCCEEEEEECCccccccHHHHHHHHHHHHHCCCC--EEEEEECC--CC-----------------
Confidence            4567777777776   47899999998        77888999999986  33343332  22                 


Q ss_pred             hhhcccCCCCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHc-CCCCCcEEEEcC-CccchHHHHHcCCe
Q 022360          168 SAASTTTSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIA-SINPQRTLFFED-SVRNIQAGKRVGLD  245 (298)
Q Consensus       168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l-~i~p~~~i~iGD-s~~Di~~a~~aG~~  245 (298)
                                                           .||+++.+..+++++ +++|++|+|||| +.+|+.+|+++|+.
T Consensus        84 -------------------------------------~KP~~~~~~~~~~~~~~~~~~~~v~IGD~~~~Di~~A~~~Gi~  126 (132)
T TIGR01662        84 -------------------------------------RKPKPGMFLEALKRFNEIDPEESVYVGDQDLTDLQAAKRAGLA  126 (132)
T ss_pred             -------------------------------------CCCChHHHHHHHHHcCCCChhheEEEcCCCcccHHHHHHCCCe
Confidence                                                 699999999999999 599999999999 68999999999999


Q ss_pred             EEEec
Q 022360          246 TVLIG  250 (298)
Q Consensus       246 ~v~v~  250 (298)
                      +++++
T Consensus       127 ~i~~~  131 (132)
T TIGR01662       127 FILVA  131 (132)
T ss_pred             EEEee
Confidence            99875

In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme.

>TIGR01685 MDP-1 magnesium-dependent phosphatase-1

Probab=99.63  E-value=1.2e-16  Score=135.41  Aligned_cols=104  Identities=18%  Similarity=0.235  Sum_probs=90.0

Q ss_pred             CCCCCChhHHHHHHhCC---CcEEEEeCC-ChHHHHHHHHHhCCC---------CccceeEeecCCCCCCCCCCCCChhh
Q 022360           96 ENLKPDPVLRSLLLSLP---LRKIIFTNA-DKVHAVKVLSRLGLE---------DCFEGIICFETLNPTHKNTVSDDEDD  162 (298)
Q Consensus        96 ~~~~~~~g~~~~L~~l~---~~~~ivS~~-~~~~~~~~l~~l~l~---------~~f~~i~~~~~~~~~~~~~~~~~~~~  162 (298)
                      ....++||+.++|+.|+   .+++|+|+. ....++..++.+++.         ++|+.++++++...            
T Consensus        42 ~~~~l~pGv~elL~~Lk~~G~~l~I~Sn~~~~~~~~~~L~~~~l~~~~~~~~~~~~Fd~iv~~~~~~~------------  109 (174)
T TIGR01685        42 TEVTLIKEVRDVLQTLKDAGTYLATASWNDVPEWAYEILGTFEITYAGKTVPMHSLFDDRIEIYKPNK------------  109 (174)
T ss_pred             CEEEEcccHHHHHHHHHHCCCEEEEEeCCCChHHHHHHHHhCCcCCCCCcccHHHhceeeeeccCCch------------
Confidence            45678999999999985   679999988 888889999999998         99999998875332            


Q ss_pred             HHHHHhhhcccCCCCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHc--CCCCCcEEEEcCCccchHHHH
Q 022360          163 IAFVESAASTTTSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIA--SINPQRTLFFEDSVRNIQAGK  240 (298)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l--~i~p~~~i~iGDs~~Di~~a~  240 (298)
                                                                .||.+.+++++.+++  +++|++|+||||+..|+++|+
T Consensus       110 ------------------------------------------~kp~~~i~~~~~~~~~~gl~p~e~l~VgDs~~di~aA~  147 (174)
T TIGR01685       110 ------------------------------------------AKQLEMILQKVNKVDPSVLKPAQILFFDDRTDNVREVW  147 (174)
T ss_pred             ------------------------------------------HHHHHHHHHHhhhcccCCCCHHHeEEEcChhHhHHHHH
Confidence                                                      477778888887777  899999999999999999999


Q ss_pred             HcCCeEEEecCCC
Q 022360          241 RVGLDTVLIGKSQ  253 (298)
Q Consensus       241 ~aG~~~v~v~~~~  253 (298)
                      ++|+.++++.++.
T Consensus       148 ~aGi~~i~v~~g~  160 (174)
T TIGR01685       148 GYGVTSCYCPSGM  160 (174)
T ss_pred             HhCCEEEEcCCCc
Confidence            9999999997765

This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues.

>TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein

Probab=99.62  E-value=4.9e-15  Score=129.00  Aligned_cols=193  Identities=13%  Similarity=0.109  Sum_probs=119.7

Q ss_pred             cEEEEeCCCCccCCCccHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHhCCCHHHHHHccCCCChhhHHHHhhcccC
Q 022360           15 DCLLFDLDDTLYPYSSGIAAACGQNIKDYMVEKLGIERSKIEDLGNLLYKNYGTTMAGLRAIGYDFDYDDYHSFVHGRLP   94 (298)
Q Consensus        15 k~viFDlDGTL~d~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~   94 (298)
                      .+++|||||||++.      .|.     ++..+.|.............+..+......+... ...+.+.+.+.+.    
T Consensus         2 ~la~FDlD~TLi~~------~w~-----~~~~~~g~~~~~~~~~~~~~~~~~~~~r~~ll~~-~g~~~~~i~~~~~----   65 (203)
T TIGR02137         2 EIACLDLEGVLVPE------IWI-----AFAEKTGIDALKATTRDIPDYDVLMKQRLRILDE-HGLKLGDIQEVIA----   65 (203)
T ss_pred             eEEEEeCCcccHHH------HHH-----HHHHHcCCcHHHHHhcCCcCHHHHHHHHHHHHHH-CCCCHHHHHHHHH----
Confidence            46999999999973      232     2455666532221110000111111111111111 1344555555443    


Q ss_pred             CCCCCCChhHHHHHHhCC--CcEEEEeCCChHHHHHHHHHhCCCCccceeEeecCCCCCCCCCCCCChhhHHHHHhhhcc
Q 022360           95 YENLKPDPVLRSLLLSLP--LRKIIFTNADKVHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSDDEDDIAFVESAAST  172 (298)
Q Consensus        95 ~~~~~~~~g~~~~L~~l~--~~~~ivS~~~~~~~~~~l~~l~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  172 (298)
                        .+.++||+.++|+.++  .+++|+|++....+.++++++|++.+|...+..++.+.+.|..                 
T Consensus        66 --~i~l~pga~ell~~lk~~~~~~IVS~~~~~~~~~il~~lgi~~~~an~l~~~~~g~~tG~~-----------------  126 (203)
T TIGR02137        66 --TLKPLEGAVEFVDWLRERFQVVILSDTFYEFSQPLMRQLGFPTLLCHKLEIDDSDRVVGYQ-----------------  126 (203)
T ss_pred             --hCCCCccHHHHHHHHHhCCeEEEEeCChHHHHHHHHHHcCCchhhceeeEEecCCeeECee-----------------
Confidence              2578999999999875  5799999999999999999999998887655443312211100                 


Q ss_pred             cCCCCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHHcCCeEEEecCC
Q 022360          173 TTSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTVLIGKS  252 (298)
Q Consensus       173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a~~aG~~~v~v~~~  252 (298)
                                              ...     ..+|...++.+ ++.+.   +|++|||+.||+.|++.+|.++++.+.+
T Consensus       127 ------------------------~~~-----~~~K~~~l~~l-~~~~~---~~v~vGDs~nDl~ml~~Ag~~ia~~ak~  173 (203)
T TIGR02137       127 ------------------------LRQ-----KDPKRQSVIAF-KSLYY---RVIAAGDSYNDTTMLSEAHAGILFHAPE  173 (203)
T ss_pred             ------------------------ecC-----cchHHHHHHHH-HhhCC---CEEEEeCCHHHHHHHHhCCCCEEecCCH
Confidence                                    000     12334445444 55553   7999999999999999999999998887


Q ss_pred             CCC-CCCCE-EeCCHHHHHHHhHHh
Q 022360          253 QRV-KGADY-AFESIHNIKEAIPEL  275 (298)
Q Consensus       253 ~~~-~~ad~-i~~s~~~l~~~l~~~  275 (298)
                      ..+ ..+++ ++.+.++|.+.+.+.
T Consensus       174 ~~~~~~~~~~~~~~~~~~~~~~~~~  198 (203)
T TIGR02137       174 NVIREFPQFPAVHTYEDLKREFLKA  198 (203)
T ss_pred             HHHHhCCCCCcccCHHHHHHHHHHH
Confidence            653 33333 677888888877665

This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338).

>COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism]

Probab=99.61  E-value=4.6e-15  Score=129.96  Aligned_cols=194  Identities=15%  Similarity=0.138  Sum_probs=128.7

Q ss_pred             CccEEEEeCCCCccCCCccHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHh--CCCHHHHHHccCCCChhhHHHHhh
Q 022360           13 KYDCLLFDLDDTLYPYSSGIAAACGQNIKDYMVEKLGIERSKIEDLGNLLYKNY--GTTMAGLRAIGYDFDYDDYHSFVH   90 (298)
Q Consensus        13 ~~k~viFDlDGTL~d~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~--g~~~~~~~~~~~~~~~~~~~~~~~   90 (298)
                      +.++++|||||||++     ...+.     ++.+..|.................  ..............+.+...+...
T Consensus         4 ~~~L~vFD~D~TLi~-----~~~~~-----~~~~~~g~~~~v~~~t~~~~~~~~~~~~~~~~~v~~l~g~~~~~v~~~~~   73 (212)
T COG0560           4 MKKLAVFDLDGTLIN-----AELID-----ELARGAGVGEEVLAITERAMRGELDFEESLRLRVALLKGLPVEVLEEVRE   73 (212)
T ss_pred             ccceEEEecccchhh-----HHHHH-----HHHHHhCCHHHHHHHHHHHhcccccHHHHHHHHHHHhCCCCHHHHHHHHH
Confidence            468999999999999     22222     345555553322211111110000  111111122233344444544444


Q ss_pred             cccCCCCCCCChhHHHHHHhCC---CcEEEEeCCChHHHHHHHHHhCCCCccceeEeecCCCCCCCCCCCCChhhHHHHH
Q 022360           91 GRLPYENLKPDPVLRSLLLSLP---LRKIIFTNADKVHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSDDEDDIAFVE  167 (298)
Q Consensus        91 ~~~~~~~~~~~~g~~~~L~~l~---~~~~ivS~~~~~~~~~~l~~l~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~  167 (298)
                      +.     ..+.||+.+++++++   .+++|+|++....++++.+.+|++..+...+..++ +.+.|+-+           
T Consensus        74 ~~-----~~l~~ga~elv~~lk~~G~~v~iiSgg~~~lv~~ia~~lg~d~~~an~l~~~d-G~ltG~v~-----------  136 (212)
T COG0560          74 EF-----LRLTPGAEELVAALKAAGAKVVIISGGFTFLVEPIAERLGIDYVVANELEIDD-GKLTGRVV-----------  136 (212)
T ss_pred             hc-----CcCCccHHHHHHHHHHCCCEEEEEcCChHHHHHHHHHHhCCchheeeEEEEeC-CEEeceee-----------
Confidence            31     677889888888774   78999999999999999999999999999888877 44323110           


Q ss_pred             hhhcccCCCCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHHcCCeEE
Q 022360          168 SAASTTTSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTV  247 (298)
Q Consensus       168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a~~aG~~~v  247 (298)
                                        |              .+..++.|...+..+++++|+++++++++|||.||+.|.+.+|.+.+
T Consensus       137 ------------------g--------------~~~~~~~K~~~l~~~~~~~g~~~~~~~a~gDs~nDlpml~~ag~~ia  184 (212)
T COG0560         137 ------------------G--------------PICDGEGKAKALRELAAELGIPLEETVAYGDSANDLPMLEAAGLPIA  184 (212)
T ss_pred             ------------------e--------------eecCcchHHHHHHHHHHHcCCCHHHeEEEcCchhhHHHHHhCCCCeE
Confidence                              0              00114678899999999999999999999999999999999999998


Q ss_pred             EecCCCCCCCCCEEeCCH
Q 022360          248 LIGKSQRVKGADYAFESI  265 (298)
Q Consensus       248 ~v~~~~~~~~ad~i~~s~  265 (298)
                      .-+.+..+..++..+...
T Consensus       185 ~n~~~~l~~~a~~~~~~~  202 (212)
T COG0560         185 VNPKPKLRALADVRIWPI  202 (212)
T ss_pred             eCcCHHHHHHHHHhcChh
Confidence            777766555555444443

>TIGR01261 hisB_Nterm histidinol-phosphatase

Probab=99.61  E-value=2e-15  Score=126.81  Aligned_cols=100  Identities=19%  Similarity=0.323  Sum_probs=84.9

Q ss_pred             CCCChhHHHHHHhCC---CcEEEEeCCC---------------hHHHHHHHHHhCCCCccceeEee-----cCCCCCCCC
Q 022360           98 LKPDPVLRSLLLSLP---LRKIIFTNAD---------------KVHAVKVLSRLGLEDCFEGIICF-----ETLNPTHKN  154 (298)
Q Consensus        98 ~~~~~g~~~~L~~l~---~~~~ivS~~~---------------~~~~~~~l~~l~l~~~f~~i~~~-----~~~~~~~~~  154 (298)
                      +.++||+.++|+.|+   ++++|+||..               ...+..+++.+|+.  |+.++.+     ++.+.    
T Consensus        28 ~~~~pgv~e~L~~L~~~g~~l~IvSN~~g~~~~~~~~~~~~~~~~~~~~~l~~~gl~--fd~ii~~~~~~~~~~~~----  101 (161)
T TIGR01261        28 LRFEKGVIPALLKLKKAGYKFVMVTNQDGLGTPSFPQADFDGPHNLMLQIFRSQGII--FDDVLICPHFPDDNCDC----  101 (161)
T ss_pred             eeECCCHHHHHHHHHHCCCeEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHCCCc--eeEEEECCCCCCCCCCC----
Confidence            577899999998884   7899999963               45677889999996  7766543     44333    


Q ss_pred             CCCCChhhHHHHHhhhcccCCCCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCcc
Q 022360          155 TVSDDEDDIAFVESAASTTTSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVR  234 (298)
Q Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~  234 (298)
                                                                        .||++..+..++++++++|++|+||||+.+
T Consensus       102 --------------------------------------------------~KP~~~~~~~~~~~~~~~~~e~l~IGD~~~  131 (161)
T TIGR01261       102 --------------------------------------------------RKPKIKLLEPYLKKNLIDKARSYVIGDRET  131 (161)
T ss_pred             --------------------------------------------------CCCCHHHHHHHHHHcCCCHHHeEEEeCCHH
Confidence                                                              799999999999999999999999999999


Q ss_pred             chHHHHHcCCeEEEecCCC
Q 022360          235 NIQAGKRVGLDTVLIGKSQ  253 (298)
Q Consensus       235 Di~~a~~aG~~~v~v~~~~  253 (298)
                      |+++|+++|+.++++.+++
T Consensus       132 Di~~A~~aGi~~i~~~~~~  150 (161)
T TIGR01261       132 DMQLAENLGIRGIQYDEEE  150 (161)
T ss_pred             HHHHHHHCCCeEEEEChhh
Confidence            9999999999999997765

This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis.

>TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672

Probab=99.61  E-value=1.3e-14  Score=128.86  Aligned_cols=97  Identities=14%  Similarity=0.119  Sum_probs=78.8

Q ss_pred             CCCCChhHHHHHHhCC---CcEEEEeCC----ChHHHHHHHHHhCCCCccceeEeecCCCCCCCCCCCCChhhHHHHHhh
Q 022360           97 NLKPDPVLRSLLLSLP---LRKIIFTNA----DKVHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSDDEDDIAFVESA  169 (298)
Q Consensus        97 ~~~~~~g~~~~L~~l~---~~~~ivS~~----~~~~~~~~l~~l~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~  169 (298)
                      ...+.+++.++|++++   .+++++|+.    ....++.+++++|+..+|+.+++.++...                   
T Consensus       112 ~s~p~~~a~elL~~l~~~G~~i~iVTnr~~~k~~~~a~~ll~~lGi~~~f~~i~~~d~~~~-------------------  172 (237)
T TIGR01672       112 FSIPKEVARQLIDMHQRRGDAIFFVTGRTPGKTDTVSKTLAKNFHIPAMNPVIFAGDKPGQ-------------------  172 (237)
T ss_pred             CCcchhHHHHHHHHHHHCCCEEEEEeCCCCCcCHHHHHHHHHHhCCchheeEEECCCCCCC-------------------
Confidence            4567778999999884   789999998    66688899999999999998888765442                   


Q ss_pred             hcccCCCCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHHcCCeEEEe
Q 022360          170 ASTTTSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTVLI  249 (298)
Q Consensus       170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a~~aG~~~v~v  249 (298)
                                                         .||.+.   .+++++++    ++||||+.+|+.+|+++|+.++.+
T Consensus       173 -----------------------------------~Kp~~~---~~l~~~~i----~i~vGDs~~DI~aAk~AGi~~I~V  210 (237)
T TIGR01672       173 -----------------------------------YQYTKT---QWIQDKNI----RIHYGDSDNDITAAKEAGARGIRI  210 (237)
T ss_pred             -----------------------------------CCCCHH---HHHHhCCC----eEEEeCCHHHHHHHHHCCCCEEEE
Confidence                                               466654   35567776    799999999999999999999999


Q ss_pred             cCCCC
Q 022360          250 GKSQR  254 (298)
Q Consensus       250 ~~~~~  254 (298)
                      .++..
T Consensus       211 ~~g~~  215 (237)
T TIGR01672       211 LRASN  215 (237)
T ss_pred             EecCC
Confidence            77653

Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion.

>cd01427 HAD_like Haloacid dehalogenase-like hydrolases

Probab=99.59  E-value=5.2e-15  Score=117.89  Aligned_cols=116  Identities=23%  Similarity=0.293  Sum_probs=89.3

Q ss_pred             CCCCCChhHHHHHHhCC---CcEEEEeCCChHHHHHHHHHhCCCCccceeEeecCCCCCCCCCCCCChhhHHHHHhhhcc
Q 022360           96 ENLKPDPVLRSLLLSLP---LRKIIFTNADKVHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSDDEDDIAFVESAAST  172 (298)
Q Consensus        96 ~~~~~~~g~~~~L~~l~---~~~~ivS~~~~~~~~~~l~~l~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  172 (298)
                      ....++|++.++|+.|+   .+++++|++....++..++.+++..+++.+++.+.........                 
T Consensus        21 ~~~~~~~~~~~~l~~l~~~g~~i~ivS~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~-----------------   83 (139)
T cd01427          21 EELELYPGVKEALKELKEKGIKLALATNKSRREVLELLEELGLDDYFDPVITSNGAAIYYPKE-----------------   83 (139)
T ss_pred             ccCCcCcCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHHHcCCchhhhheeccchhhhhcccc-----------------
Confidence            44688899999988875   6799999999999999999999988888888776543210000                 


Q ss_pred             cCCCCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHHcCCeEEEe
Q 022360          173 TTSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTVLI  249 (298)
Q Consensus       173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a~~aG~~~v~v  249 (298)
                          ....        .+         .....+||++..+..++++++.+++++++|||+.+|+++++++|+.++++
T Consensus        84 ----~~~~--------~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~igD~~~d~~~~~~~g~~~i~v  139 (139)
T cd01427          84 ----GLFL--------GG---------GPFDIGKPNPDKLLAALKLLGVDPEEVLMVGDSLNDIEMAKAAGGLGVAV  139 (139)
T ss_pred             ----cccc--------cc---------cccccCCCCHHHHHHHHHHcCCChhhEEEeCCCHHHHHHHHHcCCceeeC
Confidence                0000        00         00012599999999999999999999999999999999999999998764

The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.

>TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit

Probab=99.58  E-value=3e-15  Score=126.56  Aligned_cols=110  Identities=16%  Similarity=0.183  Sum_probs=91.8

Q ss_pred             HHHHHhCCCcEEEEeCCChHHHHHHHHHhCCCCccceeEeecCCCCCCCCCCCCChhhHHHHHhhhcccCCCCCCchhhh
Q 022360          105 RSLLLSLPLRKIIFTNADKVHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSDDEDDIAFVESAASTTTSANGPQIFDI  184 (298)
Q Consensus       105 ~~~L~~l~~~~~ivS~~~~~~~~~~l~~l~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  184 (298)
                      ...|+..+++++|+|+.....++..++++++..+|+.                                           
T Consensus        43 ~~~L~~~Gi~laIiT~k~~~~~~~~l~~lgi~~~f~~-------------------------------------------   79 (169)
T TIGR02726        43 VIVLQLCGIDVAIITSKKSGAVRHRAEELKIKRFHEG-------------------------------------------   79 (169)
T ss_pred             HHHHHHCCCEEEEEECCCcHHHHHHHHHCCCcEEEec-------------------------------------------
Confidence            4567778899999999999999999999999877741                                           


Q ss_pred             ccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHHcCCeEEEecC-CCCCCCCCEEeC
Q 022360          185 IGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTVLIGK-SQRVKGADYAFE  263 (298)
Q Consensus       185 ~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a~~aG~~~v~v~~-~~~~~~ad~i~~  263 (298)
                                          .||+|..++.+++++++++++|++|||+.||+.|++.+|+..++.+. ...+..+++++.
T Consensus        80 --------------------~kpkp~~~~~~~~~l~~~~~ev~~iGD~~nDi~~~~~ag~~~am~nA~~~lk~~A~~I~~  139 (169)
T TIGR02726        80 --------------------IKKKTEPYAQMLEEMNISDAEVCYVGDDLVDLSMMKRVGLAVAVGDAVADVKEAAAYVTT  139 (169)
T ss_pred             --------------------CCCCHHHHHHHHHHcCcCHHHEEEECCCHHHHHHHHHCCCeEECcCchHHHHHhCCEEcC
Confidence                                37888999999999999999999999999999999999999998854 445788899886


Q ss_pred             CHHH---HHHHhHHhhc
Q 022360          264 SIHN---IKEAIPELWE  277 (298)
Q Consensus       264 s~~~---l~~~l~~~~~  277 (298)
                      +..+   +.++++.++.
T Consensus       140 ~~~~~g~v~e~~e~il~  156 (169)
T TIGR02726       140 ARGGHGAVREVAELILK  156 (169)
T ss_pred             CCCCCCHHHHHHHHHHH
Confidence            4332   4566666554

Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases.

>TIGR01664 DNA-3'-Pase DNA 3'-phosphatase

Probab=99.58  E-value=6.3e-15  Score=124.39  Aligned_cols=93  Identities=20%  Similarity=0.219  Sum_probs=75.8

Q ss_pred             CChhHHHHHHhC---CCcEEEEeCCChH------------HHHHHHHHhCCCCccceeEeecCCCCCCCCCCCCChhhHH
Q 022360          100 PDPVLRSLLLSL---PLRKIIFTNADKV------------HAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSDDEDDIA  164 (298)
Q Consensus       100 ~~~g~~~~L~~l---~~~~~ivS~~~~~------------~~~~~l~~l~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~  164 (298)
                      ++||+.++|+.|   +++++|+||+...            .++..++++|+..  +.++++++...              
T Consensus        43 ~~pgv~e~L~~Lk~~G~~l~I~TN~~~~~~~~~~~~~~~~~i~~~l~~~gl~~--~~ii~~~~~~~--------------  106 (166)
T TIGR01664        43 LYPEIPAKLQELDDEGYKIVIFTNQSGIGRGKLSAESFKNKIEAFLEKLKVPI--QVLAATHAGLY--------------  106 (166)
T ss_pred             ecCCHHHHHHHHHHCCCEEEEEeCCcccccCcccHHHHHHHHHHHHHHcCCCE--EEEEecCCCCC--------------
Confidence            678888888887   4789999997753            4678889999853  45555543222              


Q ss_pred             HHHhhhcccCCCCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcC--CCCCcEEEEcCCc--------c
Q 022360          165 FVESAASTTTSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIAS--INPQRTLFFEDSV--------R  234 (298)
Q Consensus       165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~--i~p~~~i~iGDs~--------~  234 (298)
                                                              .||+|..+..++++++  ++|++++||||+.        +
T Consensus       107 ----------------------------------------~KP~p~~~~~~~~~~~~~~~~~~~v~VGD~~~~~~~~~~~  146 (166)
T TIGR01664       107 ----------------------------------------RKPMTGMWEYLQSQYNSPIKMTRSFYVGDAAGRKLDFSDA  146 (166)
T ss_pred             ----------------------------------------CCCccHHHHHHHHHcCCCCCchhcEEEECCCCCCCCCchh
Confidence                                                    6999999999999999  9999999999996        6


Q ss_pred             chHHHHHcCCeEEE
Q 022360          235 NIQAGKRVGLDTVL  248 (298)
Q Consensus       235 Di~~a~~aG~~~v~  248 (298)
                      |+++|+++|+.+++
T Consensus       147 Di~aA~~aGi~~~~  160 (166)
T TIGR01664       147 DIKFAKNLGLEFKY  160 (166)
T ss_pred             HHHHHHHCCCCcCC
Confidence            99999999999864

The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region.

>TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase

Probab=99.58  E-value=4.3e-14  Score=120.32  Aligned_cols=112  Identities=14%  Similarity=0.117  Sum_probs=78.4

Q ss_pred             CCCChhHHHHHHhCC---CcEEEEeCCChHHHHHHHHHhCCCCccceeEeecCCCCCCCCCCCCChhhHHHHHhhhcccC
Q 022360           98 LKPDPVLRSLLLSLP---LRKIIFTNADKVHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSDDEDDIAFVESAASTTT  174 (298)
Q Consensus        98 ~~~~~g~~~~L~~l~---~~~~ivS~~~~~~~~~~l~~l~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  174 (298)
                      .+++||+.++|+.|+   ++++|+|++....++..++++++.++|+.+++++..-.-.|                     
T Consensus        71 ~~l~~g~~~ll~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~~g---------------------  129 (188)
T TIGR01489        71 APIDPGFKEFIAFIKEHGIDFIVISDGNDFFIDPVLEGIGEKDVFIEIYSNPASFDNDG---------------------  129 (188)
T ss_pred             CCCCccHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHHcCChhheeEEeccCceECCCC---------------------
Confidence            578899999998874   78999999999999999999999999999987654221000                     


Q ss_pred             CCCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHHcCCeE
Q 022360          175 SANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDT  246 (298)
Q Consensus       175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a~~aG~~~  246 (298)
                            ++..     .|++.-+..+  ...+.+|+..+++++++.   ++++++|||+.+|+.+|+++++-.
T Consensus       130 ------~~~~-----~~~~~~~~~~--~~~g~~K~~~~~~~~~~~---~~~~i~iGD~~~D~~aa~~~d~~~  185 (188)
T TIGR01489       130 ------RHIV-----WPHHCHGCCS--CPCGCCKGKVIHKLSEPK---YQHIIYIGDGVTDVCPAKLSDVVF  185 (188)
T ss_pred             ------cEEE-----ecCCCCccCc--CCCCCCHHHHHHHHHhhc---CceEEEECCCcchhchHhcCCccc
Confidence                  0000     0000000000  001456788999888765   789999999999999999986544

Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact.

>TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family

Probab=99.57  E-value=4.4e-15  Score=123.82  Aligned_cols=113  Identities=16%  Similarity=0.212  Sum_probs=92.6

Q ss_pred             HHHHHHhCCCcEEEEeCCChHHHHHHHHHhCCCCccceeEeecCCCCCCCCCCCCChhhHHHHHhhhcccCCCCCCchhh
Q 022360          104 LRSLLLSLPLRKIIFTNADKVHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSDDEDDIAFVESAASTTTSANGPQIFD  183 (298)
Q Consensus       104 ~~~~L~~l~~~~~ivS~~~~~~~~~~l~~l~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  183 (298)
                      +.+.|+..+.+++|+|+.....+...++++|+..+|+.                                          
T Consensus        36 ~i~~Lk~~G~~i~IvTn~~~~~~~~~l~~~gi~~~~~~------------------------------------------   73 (154)
T TIGR01670        36 GIRCALKSGIEVAIITGRKAKLVEDRCKTLGITHLYQG------------------------------------------   73 (154)
T ss_pred             HHHHHHHCCCEEEEEECCCCHHHHHHHHHcCCCEEEec------------------------------------------
Confidence            45666777789999999999999999999999877631                                          


Q ss_pred             hccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHHcCCeEEEecC-CCCCCCCCEEe
Q 022360          184 IIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTVLIGK-SQRVKGADYAF  262 (298)
Q Consensus       184 ~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a~~aG~~~v~v~~-~~~~~~ad~i~  262 (298)
                                           .+|+++.+..+++++++++++|++|||+.||+.+++.+|+..++... ...+..+++++
T Consensus        74 ---------------------~~~k~~~~~~~~~~~~~~~~~~~~vGDs~~D~~~~~~ag~~~~v~~~~~~~~~~a~~i~  132 (154)
T TIGR01670        74 ---------------------QSNKLIAFSDILEKLALAPENVAYIGDDLIDWPVMEKVGLSVAVADAHPLLIPRADYVT  132 (154)
T ss_pred             ---------------------ccchHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCeEecCCcCHHHHHhCCEEe
Confidence                                 37788999999999999999999999999999999999998444322 33467789999


Q ss_pred             CCHHH---HHHHhHHhhccC
Q 022360          263 ESIHN---IKEAIPELWESD  279 (298)
Q Consensus       263 ~s~~~---l~~~l~~~~~~~  279 (298)
                      .+..+   +.++++++++..
T Consensus       133 ~~~~~~g~~~~~~~~~~~~~  152 (154)
T TIGR01670       133 RIAGGRGAVREVCELLLLAQ  152 (154)
T ss_pred             cCCCCCcHHHHHHHHHHHhh
Confidence            88754   778888776543

The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved.

>PRK01158 phosphoglycolate phosphatase; Provisional

Probab=99.55  E-value=7.5e-15  Score=129.48  Aligned_cols=72  Identities=19%  Similarity=0.275  Sum_probs=61.7

Q ss_pred             CCCCHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHHcCCeEEEecCCC-CCCCCCEEeCCHHH--HHHHhHHhh
Q 022360          205 CKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTVLIGKSQ-RVKGADYAFESIHN--IKEAIPELW  276 (298)
Q Consensus       205 ~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a~~aG~~~v~v~~~~-~~~~ad~i~~s~~~--l~~~l~~~~  276 (298)
                      +.+|+.+++.+++++|++++++++|||+.||++|++.+|+++++.+... .+..+++++.+.++  +.+.|++++
T Consensus       155 ~~~Kg~al~~l~~~~~i~~~~~i~~GD~~NDi~m~~~ag~~vam~Na~~~vk~~a~~v~~~n~~~Gv~~~l~~~~  229 (230)
T PRK01158        155 GVNKGTGLKKLAELMGIDPEEVAAIGDSENDLEMFEVAGFGVAVANADEELKEAADYVTEKSYGEGVAEAIEHLL  229 (230)
T ss_pred             CCChHHHHHHHHHHhCCCHHHEEEECCchhhHHHHHhcCceEEecCccHHHHHhcceEecCCCcChHHHHHHHHh
Confidence            4788899999999999999999999999999999999999998875544 47889999987665  777777653

>TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458

Probab=99.55  E-value=8.4e-15  Score=132.06  Aligned_cols=68  Identities=16%  Similarity=0.317  Sum_probs=61.3

Q ss_pred             CCCCHHHHHHHHHHcCCCCCcEEEEcCCc-cchHHHHHcCCeEEEecCCCC--------CCCCCEEeCCHHHHHHHh
Q 022360          205 CKPSELAIEKALKIASINPQRTLFFEDSV-RNIQAGKRVGLDTVLIGKSQR--------VKGADYAFESIHNIKEAI  272 (298)
Q Consensus       205 ~kp~~~~~~~~l~~l~i~p~~~i~iGDs~-~Di~~a~~aG~~~v~v~~~~~--------~~~ad~i~~s~~~l~~~l  272 (298)
                      +||+|.++..++++++++|++|+||||+. +||.+|+++|+.++++.++..        ...|+++++++.+|.+.|
T Consensus       178 gKP~p~~~~~~~~~~~~~~~~~~~vGD~~~~Di~~a~~~G~~~i~v~~G~~~~~~~~~~~~~pd~~~~sl~el~~~l  254 (257)
T TIGR01458       178 GKPSKTFFLEALRATGCEPEEAVMIGDDCRDDVGGAQDCGMRGIQVRTGKYRPSDEEKINVPPDLTCDSLPHAVDLI  254 (257)
T ss_pred             cCCCHHHHHHHHHHhCCChhhEEEECCCcHHHHHHHHHcCCeEEEECCCCCChHHhcccCCCCCEEECCHHHHHHHH
Confidence            69999999999999999999999999997 999999999999999977631        356899999999998764

This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published.

>TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase

Probab=99.53  E-value=5.6e-14  Score=123.16  Aligned_cols=126  Identities=11%  Similarity=0.100  Sum_probs=86.4

Q ss_pred             CCCChhHHHHHHhCC---CcEEEEeCCChHHHHHHHHHhCCCCcc-c--eeEeecCCCCCCCCCCCCChhhHHHHHhhhc
Q 022360           98 LKPDPVLRSLLLSLP---LRKIIFTNADKVHAVKVLSRLGLEDCF-E--GIICFETLNPTHKNTVSDDEDDIAFVESAAS  171 (298)
Q Consensus        98 ~~~~~g~~~~L~~l~---~~~~ivS~~~~~~~~~~l~~l~l~~~f-~--~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  171 (298)
                      ..++||+.++|+.++   .+++|+|++...+++.+++.++....| .  .++..+.+..                     
T Consensus        69 ~~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~~~~~~i~~n~~~~~~~~~~~---------------------  127 (214)
T TIGR03333        69 AEIREGFREFVAFINEHGIPFYVISGGMDFFVYPLLEGIVEKDRIYCNEADFSNEYIHI---------------------  127 (214)
T ss_pred             CcccccHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHhhCCcccEEeceeEeeCCeeEE---------------------
Confidence            678899999998884   789999999999999999887543322 1  1211111100                     


Q ss_pred             ccCCCCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHH----------HHHHHHHcCCCCCcEEEEcCCccchHHHHH
Q 022360          172 TTTSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELA----------IEKALKIASINPQRTLFFEDSVRNIQAGKR  241 (298)
Q Consensus       172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~----------~~~~l~~l~i~p~~~i~iGDs~~Di~~a~~  241 (298)
                                                       .+|.|..          ...++++++..+++++||||+.+|+.+|+.
T Consensus       128 ---------------------------------~~p~~~~~~~~~~cg~~K~~~l~~~~~~~~~~i~iGDg~~D~~~a~~  174 (214)
T TIGR03333       128 ---------------------------------DWPHPCDGTCQNQCGCCKPSLIRKLSEPNDYHIVIGDSVTDVEAAKQ  174 (214)
T ss_pred             ---------------------------------eCCCCCccccccCCCCCHHHHHHHHhhcCCcEEEEeCCHHHHHHHHh
Confidence                                             2333222          235556666688899999999999999999


Q ss_pred             cCCeEEEe---cCCCCCCCCCEEeCCHHHHHHHhHHhhc
Q 022360          242 VGLDTVLI---GKSQRVKGADYAFESIHNIKEAIPELWE  277 (298)
Q Consensus       242 aG~~~v~v---~~~~~~~~ad~i~~s~~~l~~~l~~~~~  277 (298)
                      +|+..+--   ........+...++++.|+...|+++++
T Consensus       175 Ad~~~ar~~l~~~~~~~~~~~~~~~~f~di~~~l~~~~~  213 (214)
T TIGR03333       175 SDLCFARDYLLNECEELGLNHAPFQDFYDVRKELENVKE  213 (214)
T ss_pred             CCeeEehHHHHHHHHHcCCCccCcCCHHHHHHHHHHHhc
Confidence            99833311   1112345578889999999999988764

Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX.

>TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490

Probab=99.52  E-value=8e-13  Score=114.22  Aligned_cols=110  Identities=13%  Similarity=0.071  Sum_probs=83.3

Q ss_pred             CCCChhHHHHHHhCC---CcEEEEeCCChHHHHHHHHHhCCCCccceeEeecCCCCCCCCCCCCChhhHHHHHhhhcccC
Q 022360           98 LKPDPVLRSLLLSLP---LRKIIFTNADKVHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSDDEDDIAFVESAASTTT  174 (298)
Q Consensus        98 ~~~~~g~~~~L~~l~---~~~~ivS~~~~~~~~~~l~~l~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  174 (298)
                      ..++|++.++|+.++   .+++|+|++....++..++++|++.+|...+...+-+.+.|                     
T Consensus        86 ~~~~~~~~~~l~~l~~~g~~v~ivS~s~~~~v~~~~~~lg~~~~~~~~l~~~~~g~~~g---------------------  144 (202)
T TIGR01490        86 SILYPEARDLIRWHKAEGHTIVLVSASLTILVKPLARILGIDNAIGTRLEESEDGIYTG---------------------  144 (202)
T ss_pred             HhccHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHcCCcceEecceEEcCCCEEeC---------------------
Confidence            467899999998764   68999999999999999999999887766333211111111                     


Q ss_pred             CCCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHHcCCeEEEec
Q 022360          175 SANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTVLIG  250 (298)
Q Consensus       175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a~~aG~~~v~v~  250 (298)
                                  ....++          ..+++|...++.++++.++++++|+++|||.+|+.+++.+|..++...
T Consensus       145 ------------~~~~~~----------~~g~~K~~~l~~~~~~~~~~~~~~~~~gDs~~D~~~~~~a~~~~~v~~  198 (202)
T TIGR01490       145 ------------NIDGNN----------CKGEGKVHALAELLAEEQIDLKDSYAYGDSISDLPLLSLVGHPYVVNP  198 (202)
T ss_pred             ------------CccCCC----------CCChHHHHHHHHHHHHcCCCHHHcEeeeCCcccHHHHHhCCCcEEeCC
Confidence                        000010          015788889999999999999999999999999999999998876543

A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog.

>TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like

Probab=99.51  E-value=9.4e-14  Score=117.27  Aligned_cols=102  Identities=19%  Similarity=0.253  Sum_probs=78.0

Q ss_pred             CCCChhHHHHHHhCC---CcEEEEeCCChHHHHHHHHHhCCCCccceeEeecCCCCCCCCCCCCChhhHHHHHhhhcccC
Q 022360           98 LKPDPVLRSLLLSLP---LRKIIFTNADKVHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSDDEDDIAFVESAASTTT  174 (298)
Q Consensus        98 ~~~~~g~~~~L~~l~---~~~~ivS~~~~~~~~~~l~~l~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  174 (298)
                      +.+.||+.++|+.++   .+++|+|++....++..++++|+..+|...+..++.+...|                     
T Consensus        72 ~~~~~g~~~~l~~l~~~g~~~~ivS~~~~~~i~~~~~~~g~~~~~~~~~~~~~~g~~~g---------------------  130 (177)
T TIGR01488        72 VALRPGARELISWLKERGIDTVIVSGGFDFFVEPVAEKLGIDDVFANRLEFDDNGLLTG---------------------  130 (177)
T ss_pred             CCcCcCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCchheeeeEEECCCCEEeC---------------------
Confidence            557899999998774   77999999999999999999999888877766543222100                     


Q ss_pred             CCCCCchhhhccccCC-CCCCcccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHHc
Q 022360          175 SANGPQIFDIIGHFAQ-PNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRV  242 (298)
Q Consensus       175 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a~~a  242 (298)
                                  .... +++          .+..|+..+..++++++++++++++||||.+|+.|++.+
T Consensus       131 ------------~~~~~~~~----------~~~~K~~~l~~~~~~~~~~~~~~~~iGDs~~D~~~~~~a  177 (177)
T TIGR01488       131 ------------PIEGQVNP----------EGECKGKVLKELLEESKITLKKIIAVGDSVNDLPMLKLA  177 (177)
T ss_pred             ------------ccCCcccC----------CcchHHHHHHHHHHHhCCCHHHEEEEeCCHHHHHHHhcC
Confidence                        0000 000          156778899999999999999999999999999999764

Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences.

>PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional

Probab=99.49  E-value=6.1e-14  Score=126.65  Aligned_cols=72  Identities=14%  Similarity=0.110  Sum_probs=60.3

Q ss_pred             CCCCHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHHcCCeEEEecCCC-CCCCCCEEeCCHHH--HHHHhHHhh
Q 022360          205 CKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTVLIGKSQ-RVKGADYAFESIHN--IKEAIPELW  276 (298)
Q Consensus       205 ~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a~~aG~~~v~v~~~~-~~~~ad~i~~s~~~--l~~~l~~~~  276 (298)
                      +..|+.+++.+++++|+++++|++|||+.||++|++.+|+++++.+... .+..|++++.+.++  +.++|++++
T Consensus       197 ~~~K~~~l~~l~~~~gi~~~e~i~~GD~~NDi~m~~~ag~~vamgna~~~lk~~Ad~v~~~n~~dGv~~~l~~~~  271 (272)
T PRK10530        197 GNSKGKRLTQWVEAQGWSMKNVVAFGDNFNDISMLEAAGLGVAMGNADDAVKARADLVIGDNTTPSIAEFIYSHV  271 (272)
T ss_pred             CCChHHHHHHHHHHcCCCHHHeEEeCCChhhHHHHHhcCceEEecCchHHHHHhCCEEEecCCCCcHHHHHHHHh
Confidence            3667899999999999999999999999999999999999887764322 36789999988666  777777653

>TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668

Probab=99.49  E-value=6.6e-13  Score=112.45  Aligned_cols=93  Identities=22%  Similarity=0.298  Sum_probs=75.5

Q ss_pred             CCChhHHHHHHhC---CCcEEEEeCCC-hHHHHHHHHHhCCCCccceeEeecCCCCCCCCCCCCChhhHHHHHhhhcccC
Q 022360           99 KPDPVLRSLLLSL---PLRKIIFTNAD-KVHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSDDEDDIAFVESAASTTT  174 (298)
Q Consensus        99 ~~~~g~~~~L~~l---~~~~~ivS~~~-~~~~~~~l~~l~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  174 (298)
                      .++|++.++|+.|   +.+++|+||+. ...+...++.+++..++         +.                        
T Consensus        43 ~~~pgv~e~L~~Lk~~g~~l~I~Sn~~~~~~~~~~~~~~gl~~~~---------~~------------------------   89 (170)
T TIGR01668        43 EAYPALRDWIEELKAAGRKLLIVSNNAGEQRAKAVEKALGIPVLP---------HA------------------------   89 (170)
T ss_pred             CcChhHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHcCCEEEc---------CC------------------------
Confidence            4456777777666   47899999998 56666777777764221         11                        


Q ss_pred             CCCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCc-cchHHHHHcCCeEEEecCCC
Q 022360          175 SANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSV-RNIQAGKRVGLDTVLIGKSQ  253 (298)
Q Consensus       175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~p~~~i~iGDs~-~Di~~a~~aG~~~v~v~~~~  253 (298)
                                                    .||+|.++..++++++++|++|++|||+. .|+.+|+++|+.++++.++.
T Consensus        90 ------------------------------~KP~p~~~~~~l~~~~~~~~~~l~IGDs~~~Di~aA~~aGi~~i~v~~g~  139 (170)
T TIGR01668        90 ------------------------------VKPPGCAFRRAHPEMGLTSEQVAVVGDRLFTDVMGGNRNGSYTILVEPLV  139 (170)
T ss_pred             ------------------------------CCCChHHHHHHHHHcCCCHHHEEEECCcchHHHHHHHHcCCeEEEEccCc
Confidence                                          59999999999999999999999999998 79999999999999998776


Q ss_pred             C
Q 022360          254 R  254 (298)
Q Consensus       254 ~  254 (298)
                      .
T Consensus       140 ~  140 (170)
T TIGR01668       140 H  140 (170)
T ss_pred             C
Confidence            4

This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family.

>PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional

Probab=99.48  E-value=8e-14  Score=119.46  Aligned_cols=105  Identities=16%  Similarity=0.298  Sum_probs=85.3

Q ss_pred             HHHHhCCCcEEEEeCCChHHHHHHHHHhCCCCccceeEeecCCCCCCCCCCCCChhhHHHHHhhhcccCCCCCCchhhhc
Q 022360          106 SLLLSLPLRKIIFTNADKVHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSDDEDDIAFVESAASTTTSANGPQIFDII  185 (298)
Q Consensus       106 ~~L~~l~~~~~ivS~~~~~~~~~~l~~l~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  185 (298)
                      ..|...+++++|+|+.....+...++.+++..+|.        +                                    
T Consensus        58 ~~L~~~Gi~v~I~T~~~~~~v~~~l~~lgl~~~f~--------g------------------------------------   93 (183)
T PRK09484         58 RCLLTSGIEVAIITGRKSKLVEDRMTTLGITHLYQ--------G------------------------------------   93 (183)
T ss_pred             HHHHHCCCEEEEEeCCCcHHHHHHHHHcCCceeec--------C------------------------------------
Confidence            34555678899999999999999999999877663        1                                    


Q ss_pred             cccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHHcCCeEEEecCCC--CCCCCCEEeC
Q 022360          186 GHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTVLIGKSQ--RVKGADYAFE  263 (298)
Q Consensus       186 ~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a~~aG~~~v~v~~~~--~~~~ad~i~~  263 (298)
                                         .++++..+..+++++|++|++|+||||+.+|+.+++++|+.++ ++...  .+..+++++.
T Consensus        94 -------------------~~~k~~~l~~~~~~~gl~~~ev~~VGDs~~D~~~a~~aG~~~~-v~~~~~~~~~~a~~v~~  153 (183)
T PRK09484         94 -------------------QSNKLIAFSDLLEKLAIAPEQVAYIGDDLIDWPVMEKVGLSVA-VADAHPLLLPRADYVTR  153 (183)
T ss_pred             -------------------CCcHHHHHHHHHHHhCCCHHHEEEECCCHHHHHHHHHCCCeEe-cCChhHHHHHhCCEEec
Confidence                               3677899999999999999999999999999999999999955 44332  3667899997


Q ss_pred             ------CHHHHHHHhHH
Q 022360          264 ------SIHNIKEAIPE  274 (298)
Q Consensus       264 ------s~~~l~~~l~~  274 (298)
                            .+.+|.+.|..
T Consensus       154 ~~~g~g~~~el~~~i~~  170 (183)
T PRK09484        154 IAGGRGAVREVCDLLLL  170 (183)
T ss_pred             CCCCCCHHHHHHHHHHH
Confidence                  56777665543

>PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional

Probab=99.48  E-value=5.3e-13  Score=124.89  Aligned_cols=112  Identities=17%  Similarity=0.301  Sum_probs=87.1

Q ss_pred             CCCCChhHHHHHHhCC---CcEEEEeCC---------------ChHHHHHHHHHhCCCCccceeEeec-----CCCCCCC
Q 022360           97 NLKPDPVLRSLLLSLP---LRKIIFTNA---------------DKVHAVKVLSRLGLEDCFEGIICFE-----TLNPTHK  153 (298)
Q Consensus        97 ~~~~~~g~~~~L~~l~---~~~~ivS~~---------------~~~~~~~~l~~l~l~~~f~~i~~~~-----~~~~~~~  153 (298)
                      ...++||+.++|..|+   ++++|+||+               ....+..+++.+++.  |+.++.+.     +.+.   
T Consensus        28 ~~~l~pGV~e~L~~Lk~~G~kL~IvTNq~g~G~~~~~~~~l~~~~~~i~~iL~~~gl~--fd~i~i~~~~~sd~~~~---  102 (354)
T PRK05446         28 KLAFEPGVIPALLKLQKAGYKLVMVTNQDGLGTDSFPQEDFDPPHNLMMQIFESQGIK--FDEVLICPHFPEDNCSC---  102 (354)
T ss_pred             cceECcCHHHHHHHHHhCCCeEEEEECCccccCccccHHHHhhHHHHHHHHHHHcCCc--eeeEEEeCCcCcccCCC---
Confidence            3688899999999885   679999995               234456677778874  66665442     2222   


Q ss_pred             CCCCCChhhHHHHHhhhcccCCCCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCc
Q 022360          154 NTVSDDEDDIAFVESAASTTTSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSV  233 (298)
Q Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~p~~~i~iGDs~  233 (298)
                                                                         +||+|.++..++++++++|++++||||+.
T Consensus       103 ---------------------------------------------------rKP~p~~l~~a~~~l~v~~~~svmIGDs~  131 (354)
T PRK05446        103 ---------------------------------------------------RKPKTGLVEEYLAEGAIDLANSYVIGDRE  131 (354)
T ss_pred             ---------------------------------------------------CCCCHHHHHHHHHHcCCCcccEEEEcCCH
Confidence                                                               79999999999999999999999999999


Q ss_pred             cchHHHHHcCCeEEEecCCCCCCCCCEEeCCHHHHHHHhH
Q 022360          234 RNIQAGKRVGLDTVLIGKSQRVKGADYAFESIHNIKEAIP  273 (298)
Q Consensus       234 ~Di~~a~~aG~~~v~v~~~~~~~~ad~i~~s~~~l~~~l~  273 (298)
                      +|+++|+++|+.+++++...         -+++++.+.|.
T Consensus       132 sDi~aAk~aGi~~I~v~~~~---------~~~~~i~~~l~  162 (354)
T PRK05446        132 TDVQLAENMGIKGIRYARET---------LNWDAIAEQLT  162 (354)
T ss_pred             HHHHHHHHCCCeEEEEECCC---------CCHHHHHHHHh
Confidence            99999999999999985422         34556665543

>PRK10513 sugar phosphate phosphatase; Provisional

Probab=99.47  E-value=4.8e-14  Score=127.47  Aligned_cols=72  Identities=13%  Similarity=0.099  Sum_probs=62.9

Q ss_pred             CCCCHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHHcCCeEEEecCCC-CCCCCCEEeCCHHH--HHHHhHHhh
Q 022360          205 CKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTVLIGKSQ-RVKGADYAFESIHN--IKEAIPELW  276 (298)
Q Consensus       205 ~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a~~aG~~~v~v~~~~-~~~~ad~i~~s~~~--l~~~l~~~~  276 (298)
                      +-.|..+++.+++++|++++++++|||+.||++|.+.+|.+++|.+... .+..|++++.+.++  +.+.|++++
T Consensus       194 gvsKg~al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~ag~~vAm~NA~~~vK~~A~~vt~~n~~dGva~~i~~~~  268 (270)
T PRK10513        194 RVNKGTGVKSLAEHLGIKPEEVMAIGDQENDIAMIEYAGVGVAMGNAIPSVKEVAQFVTKSNLEDGVAFAIEKYV  268 (270)
T ss_pred             CCChHHHHHHHHHHhCCCHHHEEEECCchhhHHHHHhCCceEEecCccHHHHHhcCeeccCCCcchHHHHHHHHh
Confidence            4788899999999999999999999999999999999999999885544 58889999987655  888887764

>PRK10444 UMP phosphatase; Provisional

Probab=99.47  E-value=3e-13  Score=121.32  Aligned_cols=64  Identities=27%  Similarity=0.407  Sum_probs=59.3

Q ss_pred             CCCCHHHHHHHHHHcCCCCCcEEEEcCCc-cchHHHHHcCCeEEEecCCCC--------CCCCCEEeCCHHHH
Q 022360          205 CKPSELAIEKALKIASINPQRTLFFEDSV-RNIQAGKRVGLDTVLIGKSQR--------VKGADYAFESIHNI  268 (298)
Q Consensus       205 ~kp~~~~~~~~l~~l~i~p~~~i~iGDs~-~Di~~a~~aG~~~v~v~~~~~--------~~~ad~i~~s~~~l  268 (298)
                      +||+|.++..++++++++|++|+||||+. +||.+|+++|+.++++.+|..        ...++++++|+.+|
T Consensus       173 gKP~~~~~~~~~~~~~~~~~~~v~IGD~~~tDi~~A~~~G~~~vlV~~G~~~~~~l~~~~~~pd~~~~sl~el  245 (248)
T PRK10444        173 GKPSPWIIRAALNKMQAHSEETVIVGDNLRTDILAGFQAGLETILVLSGVSTLDDIDSMPFRPSWIYPSVADI  245 (248)
T ss_pred             CCCCHHHHHHHHHHcCCCcccEEEECCCcHHHHHHHHHcCCCEEEECCCCCCHHHHhcCCCCCCEEECCHHHh
Confidence            79999999999999999999999999997 899999999999999988753        36799999999887

>PLN02645 phosphoglycolate phosphatase

Probab=99.47  E-value=3.4e-12  Score=118.18  Aligned_cols=69  Identities=17%  Similarity=0.207  Sum_probs=62.3

Q ss_pred             CCCCHHHHHHHHHHcCCCCCcEEEEcCCc-cchHHHHHcCCeEEEecCCCC----------CCCCCEEeCCHHHHHHHhH
Q 022360          205 CKPSELAIEKALKIASINPQRTLFFEDSV-RNIQAGKRVGLDTVLIGKSQR----------VKGADYAFESIHNIKEAIP  273 (298)
Q Consensus       205 ~kp~~~~~~~~l~~l~i~p~~~i~iGDs~-~Di~~a~~aG~~~v~v~~~~~----------~~~ad~i~~s~~~l~~~l~  273 (298)
                      +||+|.++..+++++++++++++||||+. +||.+|+++|+.++++.+|..          ...|+++++++.+|.+++.
T Consensus       229 gKP~p~~~~~a~~~~~~~~~~~~~VGD~~~~Di~~A~~aG~~~ilV~~G~~~~~~~~~~~~~~~pd~~~~~~~~l~~~~~  308 (311)
T PLN02645        229 GKPSTFMMDYLANKFGIEKSQICMVGDRLDTDILFGQNGGCKTLLVLSGVTSESMLLSPENKIQPDFYTSKISDFLTLKA  308 (311)
T ss_pred             CCChHHHHHHHHHHcCCCcccEEEEcCCcHHHHHHHHHcCCCEEEEcCCCCCHHHHHhccCCCCCCEEECCHHHHHHHhh
Confidence            69999999999999999999999999998 999999999999999977642          1468999999999987664

>TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457

Probab=99.47  E-value=2.3e-12  Score=115.71  Aligned_cols=64  Identities=25%  Similarity=0.370  Sum_probs=57.2

Q ss_pred             CCCCHHHHHHHHHHcCCCCCcEEEEcCCc-cchHHHHHcCCeEEEecCCCC------C--CCCCEEeCCHHHH
Q 022360          205 CKPSELAIEKALKIASINPQRTLFFEDSV-RNIQAGKRVGLDTVLIGKSQR------V--KGADYAFESIHNI  268 (298)
Q Consensus       205 ~kp~~~~~~~~l~~l~i~p~~~i~iGDs~-~Di~~a~~aG~~~v~v~~~~~------~--~~ad~i~~s~~~l  268 (298)
                      +||+|.+++.+++++++++++++||||+. +||.+|+++|+.++++.++..      .  ..|+++++++.++
T Consensus       177 gKP~~~~~~~~~~~~~~~~~~~~~VGD~~~~Di~~a~~~G~~~v~v~~G~~~~~~~~~~~~~pd~~v~~l~~~  249 (249)
T TIGR01457       177 GKPNAIIMEKAVEHLGTEREETLMVGDNYLTDIRAGIDAGIDTLLVHTGVTKAEEVAGLPIAPTHVVSSLAEW  249 (249)
T ss_pred             CCChHHHHHHHHHHcCCCcccEEEECCCchhhHHHHHHcCCcEEEEcCCCCCHHHHhcCCCCCCEEeCChhhC
Confidence            79999999999999999999999999997 899999999999999988752      1  4688999888763

This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those.

>PRK10976 putative hydrolase; Provisional

Probab=99.45  E-value=1.6e-13  Score=123.90  Aligned_cols=72  Identities=13%  Similarity=0.091  Sum_probs=61.2

Q ss_pred             CCCCHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHHcCCeEEEecCCC-CCCCCC--EEeCCHHH--HHHHhHHhh
Q 022360          205 CKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTVLIGKSQ-RVKGAD--YAFESIHN--IKEAIPELW  276 (298)
Q Consensus       205 ~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a~~aG~~~v~v~~~~-~~~~ad--~i~~s~~~--l~~~l~~~~  276 (298)
                      +-.|..+++.+++++|++++++++|||+.||++|.+.+|.+++|.+... .+..|+  +++.+.++  +...|++++
T Consensus       188 gvsKg~al~~l~~~lgi~~~~viafGD~~NDi~Ml~~ag~~vAm~NA~~~vK~~A~~~~v~~~n~edGVa~~l~~~~  264 (266)
T PRK10976        188 GVSKGHALEAVAKKLGYSLKDCIAFGDGMNDAEMLSMAGKGCIMGNAHQRLKDLLPELEVIGSNADDAVPHYLRKLY  264 (266)
T ss_pred             CCChHHHHHHHHHHcCCCHHHeEEEcCCcccHHHHHHcCCCeeecCCcHHHHHhCCCCeecccCchHHHHHHHHHHh
Confidence            4778899999999999999999999999999999999999999886654 466665  77777655  888887765

>PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional

Probab=99.44  E-value=5.5e-14  Score=127.43  Aligned_cols=73  Identities=8%  Similarity=0.032  Sum_probs=61.6

Q ss_pred             CCCCHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHHcCCeEEEecCCC-CCCCCCE--EeCCHHH--HHHHhHHhhc
Q 022360          205 CKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTVLIGKSQ-RVKGADY--AFESIHN--IKEAIPELWE  277 (298)
Q Consensus       205 ~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a~~aG~~~v~v~~~~-~~~~ad~--i~~s~~~--l~~~l~~~~~  277 (298)
                      +-.|..+++.+++++|++++++++|||+.||++|.+.+|.+++|.+... .+..|++  ++.+.++  +..+|++++.
T Consensus       186 g~sKg~al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~ag~~vAm~Na~~~vK~~A~~~~v~~~n~edGva~~l~~~~~  263 (272)
T PRK15126        186 GCNKGAALAVLSQHLGLSLADCMAFGDAMNDREMLGSVGRGFIMGNAMPQLRAELPHLPVIGHCRNQAVSHYLTHWLD  263 (272)
T ss_pred             CCChHHHHHHHHHHhCCCHHHeEEecCCHHHHHHHHHcCCceeccCChHHHHHhCCCCeecCCCcchHHHHHHHHHhc
Confidence            3778899999999999999999999999999999999999999886544 4677765  6666554  8888988764

>TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family

Probab=99.44  E-value=1.7e-12  Score=118.38  Aligned_cols=64  Identities=34%  Similarity=0.460  Sum_probs=57.3

Q ss_pred             CCCCHHHHHHHHHHcCCCCCcEEEEcCCc-cchHHHHHcCCeEEEecCCCC--------------CCCCCEEeCCHHHH
Q 022360          205 CKPSELAIEKALKIASINPQRTLFFEDSV-RNIQAGKRVGLDTVLIGKSQR--------------VKGADYAFESIHNI  268 (298)
Q Consensus       205 ~kp~~~~~~~~l~~l~i~p~~~i~iGDs~-~Di~~a~~aG~~~v~v~~~~~--------------~~~ad~i~~s~~~l  268 (298)
                      +||+|..+..++++++++|++|+||||+. +||.+|+++|+.++++.+|..              ...||++++++.+|
T Consensus       201 gKP~p~~~~~~~~~~~~~~~~~lmIGD~~~tDI~~A~~aGi~si~V~~G~~~~~~l~~~~~~~~~~~~Pd~~~~~l~~l  279 (279)
T TIGR01452       201 GKPSPYMFECITENFSIDPARTLMVGDRLETDILFGHRCGMTTVLVLSGVSRLEEAQEYLAAGQHDLVPDYVVESLADL  279 (279)
T ss_pred             CCCCHHHHHHHHHHhCCChhhEEEECCChHHHHHHHHHcCCcEEEECCCCCCHHHHHhhhcccccCCCCCEEecccccC
Confidence            79999999999999999999999999995 999999999999999988752              13689999998764

This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association.

>TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC

Probab=99.43  E-value=4.3e-13  Score=108.39  Aligned_cols=85  Identities=16%  Similarity=0.163  Sum_probs=73.1

Q ss_pred             CCChhHHHHHHhCC---CcEEEEeCC-ChHHHHHHHHHhC-------CCCccceeEeecCCCCCCCCCCCCChhhHHHHH
Q 022360           99 KPDPVLRSLLLSLP---LRKIIFTNA-DKVHAVKVLSRLG-------LEDCFEGIICFETLNPTHKNTVSDDEDDIAFVE  167 (298)
Q Consensus        99 ~~~~g~~~~L~~l~---~~~~ivS~~-~~~~~~~~l~~l~-------l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~  167 (298)
                      .++||+.++|+.|+   ++++++|++ ....+...+++++       +.++|+.+++++                     
T Consensus        29 ~~~~gv~e~L~~Lk~~g~~l~i~Sn~~~~~~~~~~l~~~~~~~~i~~l~~~f~~~~~~~---------------------   87 (128)
T TIGR01681        29 VTIKEIRDKLQTLKKNGFLLALASYNDDPHVAYELLKIFEDFGIIFPLAEYFDPLTIGY---------------------   87 (128)
T ss_pred             HHHHHHHHHHHHHHHCCeEEEEEeCCCCHHHHHHHHHhccccccchhhHhhhhhhhhcC---------------------
Confidence            56788899988874   778999999 8888888889888       788888887664                     


Q ss_pred             hhhcccCCCCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcC--CCCCcEEEEcCCccchHHHHH
Q 022360          168 SAASTTTSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIAS--INPQRTLFFEDSVRNIQAGKR  241 (298)
Q Consensus       168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~--i~p~~~i~iGDs~~Di~~a~~  241 (298)
                                                           .+|+|+.+..+++++|  ++|++|+||||+..|+...+.
T Consensus        88 -------------------------------------~~pkp~~~~~a~~~lg~~~~p~~~l~igDs~~n~~~~~~  126 (128)
T TIGR01681        88 -------------------------------------WLPKSPRLVEIALKLNGVLKPKSILFVDDRPDNNEEVDY  126 (128)
T ss_pred             -------------------------------------CCcHHHHHHHHHHHhcCCCCcceEEEECCCHhHHHHHHh
Confidence                                                 4788899999999999  999999999999999887654

No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC.

>PRK11009 aphA acid phosphatase/phosphotransferase; Provisional

Probab=99.42  E-value=2e-12  Score=114.87  Aligned_cols=96  Identities=18%  Similarity=0.173  Sum_probs=75.5

Q ss_pred             CCCCCChhHHHHHHhCC---CcEEEEeCC----ChHHHHHHHHHhCC--CCccceeEeecCCCCCCCCCCCCChhhHHHH
Q 022360           96 ENLKPDPVLRSLLLSLP---LRKIIFTNA----DKVHAVKVLSRLGL--EDCFEGIICFETLNPTHKNTVSDDEDDIAFV  166 (298)
Q Consensus        96 ~~~~~~~g~~~~L~~l~---~~~~ivS~~----~~~~~~~~l~~l~l--~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~  166 (298)
                      ....|+||+.++|+.++   .+++++|+.    .....+.+++.+|+  .++|+.+++.+..                  
T Consensus       111 ~~a~p~~Ga~elL~~L~~~G~~I~iVTnR~~~k~~~t~~~Llk~~gip~~~~f~vil~gd~~------------------  172 (237)
T PRK11009        111 EFSIPKEVARQLIDMHVKRGDSIYFITGRTATKTETVSKTLADDFHIPADNMNPVIFAGDKP------------------  172 (237)
T ss_pred             ccCcchHHHHHHHHHHHHCCCeEEEEeCCCCcccHHHHHHHHHHcCCCcccceeEEEcCCCC------------------
Confidence            34788999999999984   779999995    45567777788999  8889887776532                  


Q ss_pred             HhhhcccCCCCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHHcCCeE
Q 022360          167 ESAASTTTSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDT  246 (298)
Q Consensus       167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a~~aG~~~  246 (298)
                                                            .||.+..   +++++++    +++|||+.+|+.+|+++|+.+
T Consensus       173 --------------------------------------~K~~K~~---~l~~~~i----~I~IGDs~~Di~aA~~AGi~~  207 (237)
T PRK11009        173 --------------------------------------GQYTKTQ---WLKKKNI----RIFYGDSDNDITAAREAGARG  207 (237)
T ss_pred             --------------------------------------CCCCHHH---HHHhcCC----eEEEcCCHHHHHHHHHcCCcE
Confidence                                                  2555432   4556666    999999999999999999999


Q ss_pred             EEecCCCC
Q 022360          247 VLIGKSQR  254 (298)
Q Consensus       247 v~v~~~~~  254 (298)
                      +.+.++..
T Consensus       208 I~v~~G~~  215 (237)
T PRK11009        208 IRILRAAN  215 (237)
T ss_pred             EEEecCCC
Confidence            99977653

>COG0647 NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism]

Probab=99.42  E-value=9e-12  Score=112.29  Aligned_cols=229  Identities=22%  Similarity=0.281  Sum_probs=131.2

Q ss_pred             cccCccEEEEeCCCCccCCCccHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHhCCCHH----HHHH-ccCCCChhh
Q 022360           10 AAAKYDCLLFDLDDTLYPYSSGIAAACGQNIKDYMVEKLGIERSKIEDLGNLLYKNYGTTMA----GLRA-IGYDFDYDD   84 (298)
Q Consensus        10 ~~~~~k~viFDlDGTL~d~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~----~~~~-~~~~~~~~~   84 (298)
                      .++++++++||+||||++....+..+.. .++.  ++..|++.--..       ++..++..    .+.. .+.+.+++.
T Consensus         4 ~~~~y~~~l~DlDGvl~~G~~~ipga~e-~l~~--L~~~g~~~iflT-------Nn~~~s~~~~~~~L~~~~~~~~~~~~   73 (269)
T COG0647           4 VMDKYDGFLFDLDGVLYRGNEAIPGAAE-ALKR--LKAAGKPVIFLT-------NNSTRSREVVAARLSSLGGVDVTPDD   73 (269)
T ss_pred             hhhhcCEEEEcCcCceEeCCccCchHHH-HHHH--HHHcCCeEEEEe-------CCCCCCHHHHHHHHHhhcCCCCCHHH
Confidence            3567899999999999998887776654 3333  344455321110       00011111    1122 233333333


Q ss_pred             H-------HHHhhcccCCC--CCCCChhHHHHHHhCCC-------c----EEEEeCCChHHHHHHHHHh-CCCCccceeE
Q 022360           85 Y-------HSFVHGRLPYE--NLKPDPVLRSLLLSLPL-------R----KIIFTNADKVHAVKVLSRL-GLEDCFEGII  143 (298)
Q Consensus        85 ~-------~~~~~~~~~~~--~~~~~~g~~~~L~~l~~-------~----~~ivS~~~~~~~~~~l~~l-~l~~~f~~i~  143 (298)
                      +       .+++.+.....  -+.-.+++.+.|+.++.       .    .+++........+.+.+.+ .+..-...+.
T Consensus        74 i~TS~~at~~~l~~~~~~~kv~viG~~~l~~~l~~~G~~~~~~~~~~~~d~Vv~g~d~~~~~e~l~~a~~~i~~g~~fI~  153 (269)
T COG0647          74 IVTSGDATADYLAKQKPGKKVYVIGEEGLKEELEGAGFELVDEEEPARVDAVVVGLDRTLTYEKLAEALLAIAAGAPFIA  153 (269)
T ss_pred             eecHHHHHHHHHHhhCCCCEEEEECCcchHHHHHhCCcEEeccCCCCcccEEEEecCCCCCHHHHHHHHHHHHcCCcEEE
Confidence            2       22233211101  12235788888888862       1    2344333333333322222 1122234455


Q ss_pred             eecCCCCCCCCCCCCChh-hHHHHHhhhcccCCCCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCC
Q 022360          144 CFETLNPTHKNTVSDDED-DIAFVESAASTTTSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASIN  222 (298)
Q Consensus       144 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~  222 (298)
                      +..|..++.+....-+.+ ..+.++.+...+     +.+                      .+||.+.+++.++++++.+
T Consensus       154 tNpD~~~p~~~g~~pgaGai~~~~~~~tg~~-----~~~----------------------~GKP~~~i~~~al~~~~~~  206 (269)
T COG0647         154 TNPDLTVPTERGLRPGAGAIAALLEQATGRE-----PTV----------------------IGKPSPAIYEAALEKLGLD  206 (269)
T ss_pred             eCCCccccCCCCCccCcHHHHHHHHHhhCCc-----ccc----------------------cCCCCHHHHHHHHHHhCCC
Confidence            666665533322211222 223322211111     122                      2899999999999999999


Q ss_pred             CCcEEEEcCCc-cchHHHHHcCCeEEEecCCCC--------CCCCCEEeCCHHHHHHHhHHh
Q 022360          223 PQRTLFFEDSV-RNIQAGKRVGLDTVLIGKSQR--------VKGADYAFESIHNIKEAIPEL  275 (298)
Q Consensus       223 p~~~i~iGDs~-~Di~~a~~aG~~~v~v~~~~~--------~~~ad~i~~s~~~l~~~l~~~  275 (298)
                      +++++||||+. +||.+|+++|+.+++|..|..        ...++++++|+.++...+.++
T Consensus       207 ~~~~~mVGD~~~TDI~~a~~~G~~t~LV~TGv~~~~~~~~~~~~p~~v~~sl~~~~~~~~~~  268 (269)
T COG0647         207 RSEVLMVGDRLDTDILGAKAAGLDTLLVLTGVSSAEDLDRAEVKPTYVVDSLAELITALKEL  268 (269)
T ss_pred             cccEEEEcCCchhhHHHHHHcCCCEEEEccCCCChhhhhhhccCCcchHhhHHHHHhhhhcc
Confidence            99999999999 999999999999999977753        466899999999988776543

>smart00577 CPDc catalytic domain of ctd-like phosphatases

Probab=99.41  E-value=8.6e-14  Score=115.21  Aligned_cols=93  Identities=15%  Similarity=0.089  Sum_probs=81.9

Q ss_pred             CCCCChhHHHHHHhCC--CcEEEEeCCChHHHHHHHHHhCCCC-ccceeEeecCCCCCCCCCCCCChhhHHHHHhhhccc
Q 022360           97 NLKPDPVLRSLLLSLP--LRKIIFTNADKVHAVKVLSRLGLED-CFEGIICFETLNPTHKNTVSDDEDDIAFVESAASTT  173 (298)
Q Consensus        97 ~~~~~~g~~~~L~~l~--~~~~ivS~~~~~~~~~~l~~l~l~~-~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  173 (298)
                      ...++||+.++|.+|+  ++++|+|++...+++.+++++++.. +|+.+++.++...                       
T Consensus        43 ~v~l~pG~~e~L~~L~~~~~l~I~Ts~~~~~~~~il~~l~~~~~~f~~i~~~~d~~~-----------------------   99 (148)
T smart00577       43 YVKKRPGVDEFLKRASELFELVVFTAGLRMYADPVLDLLDPKKYFGYRRLFRDECVF-----------------------   99 (148)
T ss_pred             EEEECCCHHHHHHHHHhccEEEEEeCCcHHHHHHHHHHhCcCCCEeeeEEECccccc-----------------------
Confidence            3577899999999996  6789999999999999999999865 5688999887654                       


Q ss_pred             CCCCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHHcCCeE
Q 022360          174 TSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDT  246 (298)
Q Consensus       174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a~~aG~~~  246 (298)
                                                     .||+   +.++++++|.+|++|++|||+.+|++++.++|+..
T Consensus       100 -------------------------------~KP~---~~k~l~~l~~~p~~~i~i~Ds~~~~~aa~~ngI~i  138 (148)
T smart00577      100 -------------------------------VKGK---YVKDLSLLGRDLSNVIIIDDSPDSWPFHPENLIPI  138 (148)
T ss_pred             -------------------------------cCCe---EeecHHHcCCChhcEEEEECCHHHhhcCccCEEEe
Confidence                                           5775   88999999999999999999999999999988764

>TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily

Probab=99.41  E-value=2.5e-13  Score=119.24  Aligned_cols=70  Identities=24%  Similarity=0.227  Sum_probs=59.2

Q ss_pred             CCCCHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHHcCCeEEEecCCC-CCCCCCEEeCCHHH------HHHHhHH
Q 022360          205 CKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTVLIGKSQ-RVKGADYAFESIHN------IKEAIPE  274 (298)
Q Consensus       205 ~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a~~aG~~~v~v~~~~-~~~~ad~i~~s~~~------l~~~l~~  274 (298)
                      +.+|+.+++.+++++|++++++++|||+.||+.|++.+|+.++|.+... .+..|++++.+.++      +.++|++
T Consensus       147 ~~~K~~~i~~l~~~~~i~~~~~i~~GD~~NDi~m~~~ag~~vam~Na~~~~k~~A~~vt~~~~~~G~~~~v~~~l~~  223 (225)
T TIGR01482       147 GVNKGVAVKKLKEKLGIKPGETLVCGDSENDIDLFEVPGFGVAVANAQPELKEWADYVTESPYGEGGAEAIGEILQA  223 (225)
T ss_pred             CCCHHHHHHHHHHHhCCCHHHEEEECCCHhhHHHHHhcCceEEcCChhHHHHHhcCeecCCCCCCcHHHHHHHHHHh
Confidence            5788899999999999999999999999999999999999998885543 47889999876554      5555554

catalyze the same reaction as SPP.

>PHA02530 pseT polynucleotide kinase; Provisional

Probab=99.41  E-value=1.5e-12  Score=119.68  Aligned_cols=109  Identities=17%  Similarity=0.193  Sum_probs=90.4

Q ss_pred             CCCChhHHHHHHhCC---CcEEEEeCCChHHHHHHHHHhCCCC-ccceeEeecCCCCCCCCCCCCChhhHHHHHhhhccc
Q 022360           98 LKPDPVLRSLLLSLP---LRKIIFTNADKVHAVKVLSRLGLED-CFEGIICFETLNPTHKNTVSDDEDDIAFVESAASTT  173 (298)
Q Consensus        98 ~~~~~g~~~~L~~l~---~~~~ivS~~~~~~~~~~l~~l~l~~-~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  173 (298)
                      ..++|++.++|+.|+   .+++++|+.+....+..++++++.+ +|+.+++.++...+                      
T Consensus       186 ~~~~~~~~~~l~~l~~~g~~i~i~T~r~~~~~~~~l~~l~~~~~~f~~i~~~~~~~~~----------------------  243 (300)
T PHA02530        186 DKPNPMVVELVKMYKAAGYEIIVVSGRDGVCEEDTVEWLRQTDIWFDDLIGRPPDMHF----------------------  243 (300)
T ss_pred             CCCChhHHHHHHHHHhCCCEEEEEeCCChhhHHHHHHHHHHcCCchhhhhCCcchhhh----------------------
Confidence            467899999988874   7799999999999999999999987 89988877632210                      


Q ss_pred             CCCCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCC-CCCcEEEEcCCccchHHHHHcCCeEEEecCC
Q 022360          174 TSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASI-NPQRTLFFEDSVRNIQAGKRVGLDTVLIGKS  252 (298)
Q Consensus       174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i-~p~~~i~iGDs~~Di~~a~~aG~~~v~v~~~  252 (298)
                                              +... ..+||+|..+..++++++. +|++|++|||+.+|+.+|+++|+.++++.+|
T Consensus       244 ------------------------~~~~-~~~kp~p~~~~~~l~~~~~~~~~~~~~vgD~~~d~~~a~~~Gi~~i~v~~g  298 (300)
T PHA02530        244 ------------------------QREQ-GDKRPDDVVKEEIFWEKIAPKYDVLLAVDDRDQVVDMWRRIGLECWQVAPG  298 (300)
T ss_pred             ------------------------cccC-CCCCCcHHHHHHHHHHHhccCceEEEEEcCcHHHHHHHHHhCCeEEEecCC
Confidence                                    0000 0169999999999999988 6799999999999999999999999999876


Q ss_pred             C
Q 022360          253 Q  253 (298)
Q Consensus       253 ~  253 (298)
                      .
T Consensus       299 ~  299 (300)
T PHA02530        299 D  299 (300)
T ss_pred             C
Confidence            4

>COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only]

Probab=99.40  E-value=6.2e-13  Score=119.93  Aligned_cols=73  Identities=22%  Similarity=0.272  Sum_probs=63.0

Q ss_pred             CCCCHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHHcCCeEEEecCCC-CCCCCCEEeCCHHH--HHHHhHHhhc
Q 022360          205 CKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTVLIGKSQ-RVKGADYAFESIHN--IKEAIPELWE  277 (298)
Q Consensus       205 ~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a~~aG~~~v~v~~~~-~~~~ad~i~~s~~~--l~~~l~~~~~  277 (298)
                      +..|..+++.+++++|++++++++|||+.||++|.+.+|.+++|.+..+ .+..|+++..+.++  +.+.|++++.
T Consensus       187 g~~K~~al~~l~~~lgi~~~~v~afGD~~ND~~Ml~~ag~gvam~Na~~~~k~~A~~vt~~n~~~Gv~~~l~~~~~  262 (264)
T COG0561         187 GVSKGYALQRLAKLLGIKLEEVIAFGDSTNDIEMLEVAGLGVAMGNADEELKELADYVTTSNDEDGVAEALEKLLL  262 (264)
T ss_pred             CCchHHHHHHHHHHhCCCHHHeEEeCCccccHHHHHhcCeeeeccCCCHHHHhhCCcccCCccchHHHHHHHHHhc
Confidence            4888899999999999999999999999999999999999999987644 47888877777665  8888887653

>PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase)

Probab=99.38  E-value=4e-13  Score=116.34  Aligned_cols=87  Identities=22%  Similarity=0.306  Sum_probs=73.0

Q ss_pred             CCCChhHHHHHHhCC---CcEEEEeCCChHHHHHHHHHhCCCCccceeEeecCCCCCCCCCCCCChhhHHHHHhhhcccC
Q 022360           98 LKPDPVLRSLLLSLP---LRKIIFTNADKVHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSDDEDDIAFVESAASTTT  174 (298)
Q Consensus        98 ~~~~~g~~~~L~~l~---~~~~ivS~~~~~~~~~~l~~l~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  174 (298)
                      .+++|++.++|+.|+   ++++++|+.....+....+.+|+.+   .++..+..                          
T Consensus       126 d~~~~~~~~~l~~L~~~Gi~~~i~TGD~~~~a~~~~~~lgi~~---~~v~a~~~--------------------------  176 (215)
T PF00702_consen  126 DPLRPGAKEALQELKEAGIKVAILTGDNESTASAIAKQLGIFD---SIVFARVI--------------------------  176 (215)
T ss_dssp             EEBHTTHHHHHHHHHHTTEEEEEEESSEHHHHHHHHHHTTSCS---EEEEESHE--------------------------
T ss_pred             CcchhhhhhhhhhhhccCcceeeeecccccccccccccccccc---cccccccc--------------------------
Confidence            456789999988874   6799999999999999999999943   23332200                          


Q ss_pred             CCCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHHcC
Q 022360          175 SANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVG  243 (298)
Q Consensus       175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a~~aG  243 (298)
                                                    +||.+.++..+++++++++.+|+||||+.||+.|+++||
T Consensus       177 ------------------------------~kP~~k~~~~~i~~l~~~~~~v~~vGDg~nD~~al~~Ag  215 (215)
T PF00702_consen  177 ------------------------------GKPEPKIFLRIIKELQVKPGEVAMVGDGVNDAPALKAAG  215 (215)
T ss_dssp             ------------------------------TTTHHHHHHHHHHHHTCTGGGEEEEESSGGHHHHHHHSS
T ss_pred             ------------------------------ccccchhHHHHHHHHhcCCCEEEEEccCHHHHHHHHhCc
Confidence                                          289999999999999999999999999999999999987

This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J ....

>PLN02887 hydrolase family protein

Probab=99.37  E-value=6.6e-13  Score=131.57  Aligned_cols=72  Identities=15%  Similarity=0.118  Sum_probs=62.9

Q ss_pred             CCCCHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHHcCCeEEEecCCC-CCCCCCEEeCCHHH--HHHHhHHhh
Q 022360          205 CKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTVLIGKSQ-RVKGADYAFESIHN--IKEAIPELW  276 (298)
Q Consensus       205 ~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a~~aG~~~v~v~~~~-~~~~ad~i~~s~~~--l~~~l~~~~  276 (298)
                      +-.|..+++.+++++|++++++++|||+.||++|.+.+|.+++|.+... .+..|++++.+.++  +.++|++++
T Consensus       505 gvSKG~ALk~L~e~lGI~~eeviAFGDs~NDIeMLe~AG~gVAMgNA~eeVK~~Ad~VT~sNdEDGVA~aLek~~  579 (580)
T PLN02887        505 GTSKGNGVKMLLNHLGVSPDEIMAIGDGENDIEMLQLASLGVALSNGAEKTKAVADVIGVSNDEDGVADAIYRYA  579 (580)
T ss_pred             CCCHHHHHHHHHHHcCCCHHHEEEEecchhhHHHHHHCCCEEEeCCCCHHHHHhCCEEeCCCCcCHHHHHHHHhh
Confidence            4788899999999999999999999999999999999999999886654 48889999987665  777777654

>PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed

Probab=99.35  E-value=3e-12  Score=116.26  Aligned_cols=72  Identities=15%  Similarity=0.066  Sum_probs=58.3

Q ss_pred             CCCCHHHHHHHHHHcCCCC-CcEEEEcCCccchHHHHHcCCeEEEecCCCC-C----CCC-CEEe--CC--HHHHHHHhH
Q 022360          205 CKPSELAIEKALKIASINP-QRTLFFEDSVRNIQAGKRVGLDTVLIGKSQR-V----KGA-DYAF--ES--IHNIKEAIP  273 (298)
Q Consensus       205 ~kp~~~~~~~~l~~l~i~p-~~~i~iGDs~~Di~~a~~aG~~~v~v~~~~~-~----~~a-d~i~--~s--~~~l~~~l~  273 (298)
                      + .|..+++++++++|+++ +++++|||+.||++|++.+|++++|.+.... +    ..+ +.++  .+  -+.+.+.|+
T Consensus       189 ~-~Kg~al~~l~~~~~i~~~~~v~~~GDs~NDi~m~~~ag~~vam~NA~~~~k~~~~~~a~~~v~~~~~~~~~Gv~~~l~  267 (273)
T PRK00192        189 G-DKGKAVRWLKELYRRQDGVETIALGDSPNDLPMLEAADIAVVVPGPDGPNPPLLPGIADGEFILASAPGPEGWAEAIN  267 (273)
T ss_pred             C-CHHHHHHHHHHHHhccCCceEEEEcCChhhHHHHHhCCeeEEeCCCCCCCcccCccccCCceEEecCCCcHHHHHHHH
Confidence            5 77889999999999999 9999999999999999999999999876544 4    444 5666  34  335777777


Q ss_pred             Hhhc
Q 022360          274 ELWE  277 (298)
Q Consensus       274 ~~~~  277 (298)
                      ++++
T Consensus       268 ~~~~  271 (273)
T PRK00192        268 KLLS  271 (273)
T ss_pred             HHHh
Confidence            7653

>TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal

Probab=99.35  E-value=4.7e-13  Score=117.16  Aligned_cols=62  Identities=19%  Similarity=0.227  Sum_probs=53.9

Q ss_pred             CCCCHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHHcCCeEEEecCCC-CCCCCCEEeCCHH
Q 022360          205 CKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTVLIGKSQ-RVKGADYAFESIH  266 (298)
Q Consensus       205 ~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a~~aG~~~v~v~~~~-~~~~ad~i~~s~~  266 (298)
                      +..|..+++.+++++|++++++++|||+.||++|++.+|+.++|.+... .+..|++++.+.+
T Consensus       145 ~~~K~~~i~~l~~~~~i~~~~~i~iGDs~ND~~ml~~ag~~vam~na~~~~k~~A~~v~~~~~  207 (215)
T TIGR01487       145 GVDKGVGVEKLKELLGIKPEEVAAIGDSENDIDLFRVVGFKVAVANADDQLKEIADYVTSNPY  207 (215)
T ss_pred             CCChHHHHHHHHHHhCCCHHHEEEECCCHHHHHHHHhCCCeEEcCCccHHHHHhCCEEcCCCC
Confidence            4777899999999999999999999999999999999999999885544 4777898887543

TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases.

>COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only]

Probab=99.33  E-value=8.2e-12  Score=103.12  Aligned_cols=81  Identities=23%  Similarity=0.429  Sum_probs=70.7

Q ss_pred             HHhCCCcEEEEeCCChHHHHHHHHHhCCCCccceeEeecCCCCCCCCCCCCChhhHHHHHhhhcccCCCCCCchhhhccc
Q 022360          108 LLSLPLRKIIFTNADKVHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSDDEDDIAFVESAASTTTSANGPQIFDIIGH  187 (298)
Q Consensus       108 L~~l~~~~~ivS~~~~~~~~~~l~~l~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  187 (298)
                      ++..+++++|+||....-+....+++++.    .+..                                           
T Consensus        58 ~k~~gi~v~vvSNn~e~RV~~~~~~l~v~----fi~~-------------------------------------------   90 (175)
T COG2179          58 LKEAGIKVVVVSNNKESRVARAAEKLGVP----FIYR-------------------------------------------   90 (175)
T ss_pred             HHhcCCEEEEEeCCCHHHHHhhhhhcCCc----eeec-------------------------------------------
Confidence            44456889999999999999999999875    2332                                           


Q ss_pred             cCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCc-cchHHHHHcCCeEEEecC
Q 022360          188 FAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSV-RNIQAGKRVGLDTVLIGK  251 (298)
Q Consensus       188 ~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~p~~~i~iGDs~-~Di~~a~~aG~~~v~v~~  251 (298)
                                      +.||-+..|.++++++++++++|+||||.+ +|+.+++.+|+.+++|..
T Consensus        91 ----------------A~KP~~~~fr~Al~~m~l~~~~vvmVGDqL~TDVlggnr~G~~tIlV~P  139 (175)
T COG2179          91 ----------------AKKPFGRAFRRALKEMNLPPEEVVMVGDQLFTDVLGGNRAGMRTILVEP  139 (175)
T ss_pred             ----------------ccCccHHHHHHHHHHcCCChhHEEEEcchhhhhhhcccccCcEEEEEEE
Confidence                            269999999999999999999999999998 999999999999999854

>PF13242 Hydrolase_like: HAD-hyrolase-like; PDB: 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A 2HX1_D 2X4D_A 3HLT_C 3L1U_B

Probab=99.33  E-value=5.1e-12  Score=92.44  Aligned_cols=65  Identities=31%  Similarity=0.490  Sum_probs=59.6

Q ss_pred             CCCCCHHHHHHHHHHcCCCCCcEEEEcCC-ccchHHHHHcCCeEEEecCCCC--------CCCCCEEeCCHHHH
Q 022360          204 ACKPSELAIEKALKIASINPQRTLFFEDS-VRNIQAGKRVGLDTVLIGKSQR--------VKGADYAFESIHNI  268 (298)
Q Consensus       204 ~~kp~~~~~~~~l~~l~i~p~~~i~iGDs-~~Di~~a~~aG~~~v~v~~~~~--------~~~ad~i~~s~~~l  268 (298)
                      ++||+|.++..+++++++++++|++|||+ .+||.+|+++|+.++++.++..        ...|+++++++.|+
T Consensus         2 ~gKP~p~~~~~a~~~~~~~~~~~~~VGD~~~~Di~~a~~~G~~~ilV~tG~~~~~~~~~~~~~pd~vv~~l~e~   75 (75)
T PF13242_consen    2 CGKPSPGMLEQALKRLGVDPSRCVMVGDSLETDIEAAKAAGIDTILVLTGVYSPEDLEKAEHKPDYVVDDLKEA   75 (75)
T ss_dssp             CSTTSHHHHHHHHHHHTSGGGGEEEEESSTTTHHHHHHHTTSEEEEESSSSSCCCGHHHSSSTTSEEESSGGGH
T ss_pred             CCCCcHHHHHHHHHHcCCCHHHEEEEcCCcHhHHHHHHHcCCcEEEECCCCCCHHHHhccCCCCCEEECCHHhC
Confidence            37999999999999999999999999999 7999999999999999987653        36899999999875

...

>TIGR01456 CECR5 HAD-superfamily class IIA hydrolase, TIGR01456, CECR5

Probab=99.30  E-value=1.2e-10  Score=108.42  Aligned_cols=68  Identities=13%  Similarity=0.145  Sum_probs=57.3

Q ss_pred             CCCCHHHHHHHHHHc--------CC-----CCCcEEEEcCCc-cchHHHHHcCCeEEEecCCCC-------CCCCCEEeC
Q 022360          205 CKPSELAIEKALKIA--------SI-----NPQRTLFFEDSV-RNIQAGKRVGLDTVLIGKSQR-------VKGADYAFE  263 (298)
Q Consensus       205 ~kp~~~~~~~~l~~l--------~i-----~p~~~i~iGDs~-~Di~~a~~aG~~~v~v~~~~~-------~~~ad~i~~  263 (298)
                      +||++..|+.+++.+        +.     ++++++||||+. +||.+|+++||.++++.+|..       ...++++++
T Consensus       232 GKP~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~mIGD~~~tDI~ga~~~G~~silV~tG~~~~~~~~~~~~p~~vv~  311 (321)
T TIGR01456       232 GKPTKLTYDFAEDVLIDWEKRLSGTKPSTSPFHALYMVGDNPASDIIGAQNYGWFSCLVKTGVYNGGDDLKECKPTLIVN  311 (321)
T ss_pred             CCCChHHHHHHHHHHHHHHhhhccccccCCChheEEEEcCChhhhhhhHHhCCceEEEecccccCCCCCCCCCCCCEEEC
Confidence            899999999988887        43     457999999998 999999999999999977621       235899999


Q ss_pred             CHHHHHHHh
Q 022360          264 SIHNIKEAI  272 (298)
Q Consensus       264 s~~~l~~~l  272 (298)
                      |+.++.+.|
T Consensus       312 ~l~e~~~~i  320 (321)
T TIGR01456       312 DVFDAVTKI  320 (321)
T ss_pred             CHHHHHHHh
Confidence            999987654

The Schizosaccharomyces pombe sequence (EGAD|138276) is annotated as "phosphatidyl synthase," however this is due entirely to a C-terminal region of the protein (outside the region of similarity of this model) which is highly homologous to a family of CDP-alcohol phosphatidyltransferases. (Thus, the annotation of GP|4226073 from C. elegans as similar to phosphatidyl synthase, is a mistake as this gene does not contain the C-terminal portion). The physical connection of the phosphatidyl synthase and the HAD-superfamily hydrolase domain in S. pombe may, however, be an important clue to the substrate for the hydrolases in this equivalog.

>PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed

Probab=99.28  E-value=1e-11  Score=112.67  Aligned_cols=73  Identities=11%  Similarity=0.072  Sum_probs=61.2

Q ss_pred             CCCCHHHHHHHHHHcCC---CCCcEEEEcCCccchHHHHHcCCeEEEecCC-C------CCCCCCEEeCCHH--HHHHHh
Q 022360          205 CKPSELAIEKALKIASI---NPQRTLFFEDSVRNIQAGKRVGLDTVLIGKS-Q------RVKGADYAFESIH--NIKEAI  272 (298)
Q Consensus       205 ~kp~~~~~~~~l~~l~i---~p~~~i~iGDs~~Di~~a~~aG~~~v~v~~~-~------~~~~ad~i~~s~~--~l~~~l  272 (298)
                      +-.|..+++.+++.+|+   +++++++|||+.||++|.+.+|.+++|.+.. .      .+..+++++....  .+.+.|
T Consensus       185 g~sKg~al~~l~~~lgi~~~~~~~viafGDs~NDi~Ml~~ag~gvAM~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~l  264 (271)
T PRK03669        185 SAGKDQAANWLIATYQQLSGTRPTTLGLGDGPNDAPLLDVMDYAVVVKGLNREGVHLQDDDPARVYRTQREGPEGWREGL  264 (271)
T ss_pred             CCCHHHHHHHHHHHHHhhcCCCceEEEEcCCHHHHHHHHhCCEEEEecCCCCCCcccccccCCceEeccCCCcHHHHHHH
Confidence            47888999999999999   9999999999999999999999999988433 1      2346888888766  588888


Q ss_pred             HHhhc
Q 022360          273 PELWE  277 (298)
Q Consensus       273 ~~~~~  277 (298)
                      +.++.
T Consensus       265 ~~~~~  269 (271)
T PRK03669        265 DHFFS  269 (271)
T ss_pred             HHHHh
Confidence            77663

>PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 []

Probab=99.24  E-value=3.9e-10  Score=99.84  Aligned_cols=156  Identities=19%  Similarity=0.261  Sum_probs=102.9

Q ss_pred             CChhhHHHHhhcccCCCCCCCChhHHHHHHhC-----CCcEEEEeCCChHHHHHHHHHhCCCCccceeEeecCCCCCCCC
Q 022360           80 FDYDDYHSFVHGRLPYENLKPDPVLRSLLLSL-----PLRKIIFTNADKVHAVKVLSRLGLEDCFEGIICFETLNPTHKN  154 (298)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~L~~l-----~~~~~ivS~~~~~~~~~~l~~l~l~~~f~~i~~~~~~~~~~~~  154 (298)
                      ...+++.+.+..      +++.||+.++++.+     +..++|+|.+....++.++++.|+...|+.|++....-.-   
T Consensus        58 vt~~~I~~~l~~------ip~~pgm~~~l~~l~~~~~~~~~~IiSDaNs~fI~~iL~~~gl~~~f~~I~TNpa~~~~---  128 (234)
T PF06888_consen   58 VTPEDIRDALRS------IPIDPGMKELLRFLAKNQRGFDLIIISDANSFFIETILEHHGLRDCFSEIFTNPACFDA---  128 (234)
T ss_pred             CCHHHHHHHHHc------CCCCccHHHHHHHHHhcCCCceEEEEeCCcHhHHHHHHHhCCCccccceEEeCCceecC---
Confidence            456777766644      78889999999988     2568999999999999999999999999999887421100   


Q ss_pred             CCCCChhhHHHHHhhhcccCCCCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHc---CCCCCcEEEEcC
Q 022360          155 TVSDDEDDIAFVESAASTTTSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIA---SINPQRTLFFED  231 (298)
Q Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l---~i~p~~~i~iGD  231 (298)
                           .+.+              .+..++-  | .|+.-+       +  +-=|...++.+++..   |...++++||||
T Consensus       129 -----~G~l--------------~v~pyh~--h-~C~~C~-------~--NmCK~~il~~~~~~~~~~g~~~~rviYiGD  177 (234)
T PF06888_consen  129 -----DGRL--------------RVRPYHS--H-GCSLCP-------P--NMCKGKILERLLQEQAQRGVPYDRVIYIGD  177 (234)
T ss_pred             -----CceE--------------EEeCccC--C-CCCcCC-------C--ccchHHHHHHHHHHHhhcCCCcceEEEECC
Confidence                 0000              0001111  0 011100       0  112347788888763   778899999999


Q ss_pred             CccchHHHHHcCCe-EEEecCCCC----------C-CCCCEEeCCHHHHHHHhHHh
Q 022360          232 SVRNIQAGKRVGLD-TVLIGKSQR----------V-KGADYAFESIHNIKEAIPEL  275 (298)
Q Consensus       232 s~~Di~~a~~aG~~-~v~v~~~~~----------~-~~ad~i~~s~~~l~~~l~~~  275 (298)
                      +.||+-.+.+.+-. .++...++.          . ...=....+-+||.+.|.++
T Consensus       178 G~nD~Cp~~~L~~~D~v~~R~~~~l~~~i~~~~~~~~a~v~~W~~g~~i~~~l~~~  233 (234)
T PF06888_consen  178 GRNDFCPALRLRPRDVVFPRKGYPLHKLIQKNPGEVKAEVVPWSSGEEILEILLQL  233 (234)
T ss_pred             CCCCcCcccccCCCCEEecCCCChHHHHHhcCCCcceeEEEecCCHHHHHHHHHhh
Confidence            99999999987765 566655542          1 11223556777777777664

It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity

>PRK11590 hypothetical protein; Provisional

Probab=99.24  E-value=1.3e-10  Score=101.58  Aligned_cols=103  Identities=11%  Similarity=-0.051  Sum_probs=70.2

Q ss_pred             CCCChhHHHHHH-hC---CCcEEEEeCCChHHHHHHHHHhCCCCccceeEeecCCCCCCCCCCCCChhhHHHHHhhhccc
Q 022360           98 LKPDPVLRSLLL-SL---PLRKIIFTNADKVHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSDDEDDIAFVESAASTT  173 (298)
Q Consensus        98 ~~~~~g~~~~L~-~l---~~~~~ivS~~~~~~~~~~l~~l~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  173 (298)
                      ..++||+.++|+ .+   +.+++|+|++....++..++++++.. .+.+++.+-...                       
T Consensus        94 ~~~~pga~e~L~~~l~~~G~~l~IvSas~~~~~~~il~~l~~~~-~~~~i~t~l~~~-----------------------  149 (211)
T PRK11590         94 VTAFPVVQERLTTYLLSSDADVWLITGSPQPLVEQVYFDTPWLP-RVNLIASQMQRR-----------------------  149 (211)
T ss_pred             CcCCccHHHHHHHHHHhCCCEEEEEeCCcHHHHHHHHHHccccc-cCceEEEEEEEE-----------------------
Confidence            466999999994 44   46899999999999999999998633 344554431101                       


Q ss_pred             CCCCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHHcCCeEE
Q 022360          174 TSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTV  247 (298)
Q Consensus       174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a~~aG~~~v  247 (298)
                                ..|...++|-          .+..|...++.++   +.+...+.+.|||.+|+.|...+|-+.+
T Consensus       150 ----------~tg~~~g~~c----------~g~~K~~~l~~~~---~~~~~~~~aY~Ds~~D~pmL~~a~~~~~  200 (211)
T PRK11590        150 ----------YGGWVLTLRC----------LGHEKVAQLERKI---GTPLRLYSGYSDSKQDNPLLYFCQHRWR  200 (211)
T ss_pred             ----------EccEECCccC----------CChHHHHHHHHHh---CCCcceEEEecCCcccHHHHHhCCCCEE
Confidence                      1111122211          1455555555554   5567788999999999999999997766

>KOG2882 consensus p-Nitrophenyl phosphatase [Inorganic ion transport and metabolism]

Probab=99.21  E-value=1.5e-10  Score=104.18  Aligned_cols=68  Identities=28%  Similarity=0.400  Sum_probs=59.1

Q ss_pred             CCCCHHHHHHHHHHcCCCCCcEEEEcCCc-cchHHHHHcCCeEEEecCCCC------------CCCCCEEeCCHHHHHHH
Q 022360          205 CKPSELAIEKALKIASINPQRTLFFEDSV-RNIQAGKRVGLDTVLIGKSQR------------VKGADYAFESIHNIKEA  271 (298)
Q Consensus       205 ~kp~~~~~~~~l~~l~i~p~~~i~iGDs~-~Di~~a~~aG~~~v~v~~~~~------------~~~ad~i~~s~~~l~~~  271 (298)
                      +||++.++..++++++++|++|+||||+. +||.-+++.|+.++++..|-.            ...|||.++++.++...
T Consensus       223 GKP~~~m~~~l~~~~~i~psRt~mvGDRL~TDIlFG~~~G~~TLLvltGv~~led~~~~~~~~~~~PDyy~~~l~d~~~~  302 (306)
T KOG2882|consen  223 GKPSTFMFEYLLEKFNIDPSRTCMVGDRLDTDILFGKNCGFKTLLVLSGVTTLEDILEAQGDNKMVPDYYADSLGDLLPL  302 (306)
T ss_pred             CCCCHHHHHHHHHHcCCCcceEEEEcccchhhhhHhhccCcceEEEecCcCcHHHHHhcccccCCCCchHHhhHHHHhhh
Confidence            89999999999999999999999999999 899999999999999866532            34578888888777654


Q ss_pred             h
Q 022360          272 I  272 (298)
Q Consensus       272 l  272 (298)
                      +
T Consensus       303 ~  303 (306)
T KOG2882|consen  303 L  303 (306)
T ss_pred             c
Confidence            4

>KOG1615 consensus Phosphoserine phosphatase [Amino acid transport and metabolism]

Probab=99.20  E-value=1.4e-10  Score=97.91  Aligned_cols=126  Identities=13%  Similarity=0.122  Sum_probs=88.0

Q ss_pred             CCCCCChhHHHHHHhCC---CcEEEEeCCChHHHHHHHHHhCCCC--ccceeEeecCCCCCCCCCCCCChhhHHHHHhhh
Q 022360           96 ENLKPDPVLRSLLLSLP---LRKIIFTNADKVHAVKVLSRLGLED--CFEGIICFETLNPTHKNTVSDDEDDIAFVESAA  170 (298)
Q Consensus        96 ~~~~~~~g~~~~L~~l~---~~~~ivS~~~~~~~~~~l~~l~l~~--~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~  170 (298)
                      +.....||+.++.+.|+   .+++++|++..+.+.++.+.||+..  .+...+.++..|.|.|-+.              
T Consensus        85 ~k~~lT~Gi~eLv~~L~~~~~~v~liSGGF~~~i~~Va~~Lgi~~~n~yAN~l~fd~~Gk~~gfd~--------------  150 (227)
T KOG1615|consen   85 QKPTLTPGIRELVSRLHARGTQVYLISGGFRQLIEPVAEQLGIPKSNIYANELLFDKDGKYLGFDT--------------  150 (227)
T ss_pred             CCCccCCCHHHHHHHHHHcCCeEEEEcCChHHHHHHHHHHhCCcHhhhhhheeeeccCCccccccc--------------
Confidence            34567889988888775   7899999999999999999999965  7778887777776544111              


Q ss_pred             cccCCCCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHHcCCeEEEec
Q 022360          171 STTTSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTVLIG  250 (298)
Q Consensus       171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a~~aG~~~v~v~  250 (298)
                                      ...       +..     +-.|+..+..+.+  +.+...++||||+.||+++... |  .++++
T Consensus       151 ----------------~~p-------tsd-----sggKa~~i~~lrk--~~~~~~~~mvGDGatDlea~~p-a--~afi~  197 (227)
T KOG1615|consen  151 ----------------NEP-------TSD-----SGGKAEVIALLRK--NYNYKTIVMVGDGATDLEAMPP-A--DAFIG  197 (227)
T ss_pred             ----------------CCc-------ccc-----CCccHHHHHHHHh--CCChheeEEecCCccccccCCc-h--hhhhc
Confidence                            011       111     3455678888877  7777899999999999998766 2  23333


Q ss_pred             CCC------CCCCCCEEeCCHHHH
Q 022360          251 KSQ------RVKGADYAFESIHNI  268 (298)
Q Consensus       251 ~~~------~~~~ad~i~~s~~~l  268 (298)
                      .+.      .+..+++.+.++..|
T Consensus       198 ~~g~~~r~~vk~nak~~~~~f~~L  221 (227)
T KOG1615|consen  198 FGGNVIREGVKANAKWYVTDFYVL  221 (227)
T ss_pred             cCCceEcHhhHhccHHHHHHHHHH
Confidence            333      245555555555444

>TIGR01686 FkbH FkbH-like domain

Probab=99.15  E-value=9.3e-11  Score=109.04  Aligned_cols=87  Identities=17%  Similarity=0.143  Sum_probs=77.0

Q ss_pred             CChhHHHHHHhCC---CcEEEEeCCChHHHHHHHHH----hCCCCccceeEeecCCCCCCCCCCCCChhhHHHHHhhhcc
Q 022360          100 PDPVLRSLLLSLP---LRKIIFTNADKVHAVKVLSR----LGLEDCFEGIICFETLNPTHKNTVSDDEDDIAFVESAAST  172 (298)
Q Consensus       100 ~~~g~~~~L~~l~---~~~~ivS~~~~~~~~~~l~~----l~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  172 (298)
                      +++++.++|+.|+   +.++|+|+.+...+...+++    +++.++|+.+...                           
T Consensus        32 ~~~~~~e~L~~L~~~Gi~lai~S~n~~~~a~~~l~~~~~~~~~~~~f~~~~~~---------------------------   84 (320)
T TIGR01686        32 LHKTLQEKIKTLKKQGFLLALASKNDEDDAKKVFERRKDFILQAEDFDARSIN---------------------------   84 (320)
T ss_pred             cHHHHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHhCccccCcHHHeeEEEEe---------------------------
Confidence            4788888888874   67899999999999999998    8888899887553                           


Q ss_pred             cCCCCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHHcCCe
Q 022360          173 TTSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLD  245 (298)
Q Consensus       173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a~~aG~~  245 (298)
                                                      .||||+.+..+++++|+.+++++||||+..|+.++++++-.
T Consensus        85 --------------------------------~~pk~~~i~~~~~~l~i~~~~~vfidD~~~d~~~~~~~lp~  125 (320)
T TIGR01686        85 --------------------------------WGPKSESLRKIAKKLNLGTDSFLFIDDNPAERANVKITLPV  125 (320)
T ss_pred             --------------------------------cCchHHHHHHHHHHhCCCcCcEEEECCCHHHHHHHHHHCCC
Confidence                                            38999999999999999999999999999999999997754

The C-terminal portion of this domain is unique to this family (by BLAST).

>TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein

Probab=99.14  E-value=1.1e-10  Score=102.43  Aligned_cols=44  Identities=11%  Similarity=-0.001  Sum_probs=40.2

Q ss_pred             CCCCHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHHcCCeEEE
Q 022360          205 CKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTVL  248 (298)
Q Consensus       205 ~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a~~aG~~~v~  248 (298)
                      +-.|+.+++.+++++|+++++|++|||+.||+.|++.+|.+++.
T Consensus       177 ~~~Kg~al~~l~~~lgi~~~~vi~~GD~~NDi~ml~~ag~~va~  220 (221)
T TIGR02463       177 SSSKGKAANWLKATYNQPDVKTLGLGDGPNDLPLLEVADYAVVI  220 (221)
T ss_pred             CCCHHHHHHHHHHHhCCCCCcEEEECCCHHHHHHHHhCCceEEe
Confidence            45677899999999999999999999999999999999988763

This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate.

>TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily

Probab=99.13  E-value=6.9e-11  Score=106.12  Aligned_cols=63  Identities=16%  Similarity=0.187  Sum_probs=53.8

Q ss_pred             CCCCHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHHcCCeEEEecCC-CCCCCCCEEeCCHHH
Q 022360          205 CKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTVLIGKS-QRVKGADYAFESIHN  267 (298)
Q Consensus       205 ~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a~~aG~~~v~v~~~-~~~~~ad~i~~s~~~  267 (298)
                      +-.|..+++.++++++++++++++|||+.||+.|++.+|+++++.+.. ..+..|++++.+.++
T Consensus       186 ~~~K~~~i~~~~~~~~~~~~~~~~~GD~~nD~~m~~~~~~~~a~~na~~~~k~~a~~~~~~n~~  249 (256)
T TIGR00099       186 GVSKGSALQSLAEALGISLEDVIAFGDGMNDIEMLEAAGYGVAMGNADEELKALADYVTDSNNE  249 (256)
T ss_pred             CCChHHHHHHHHHHcCCCHHHEEEeCCcHHhHHHHHhCCceeEecCchHHHHHhCCEEecCCCC
Confidence            477889999999999999999999999999999999999998886433 346778888877543

The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences.

>TIGR02244 HAD-IG-Ncltidse HAD superfamily (subfamily IG) hydrolase, 5'-nucleotidase

Probab=99.11  E-value=3.9e-09  Score=98.43  Aligned_cols=129  Identities=20%  Similarity=0.183  Sum_probs=84.0

Q ss_pred             CCCCChhHHHHHHhCC---CcEEEEeCCChHHHHHHHHHh-C-------CCCccceeEeecCCCCCCCCCCCCChhhHHH
Q 022360           97 NLKPDPVLRSLLLSLP---LRKIIFTNADKVHAVKVLSRL-G-------LEDCFEGIICFETLNPTHKNTVSDDEDDIAF  165 (298)
Q Consensus        97 ~~~~~~g~~~~L~~l~---~~~~ivS~~~~~~~~~~l~~l-~-------l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~  165 (298)
                      .+.+.||+.++|+.|+   ++++|+||+...+++..++.+ +       +.++||.+++...-..+              
T Consensus       182 yv~~~pgl~elL~~Lr~~G~klfLvTNS~~~yt~~im~~l~g~~~~~~~w~~yFD~IIt~a~KP~F--------------  247 (343)
T TIGR02244       182 YVLRDPKLPLFLSKLKEHGKKLFLLTNSDYDYTDKGMKYLLGPFLGEHDWRDYFDVVIVDARKPGF--------------  247 (343)
T ss_pred             HhccchhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhhCCcccccchHhhCcEEEeCCCCCcc--------------
Confidence            3566899999998874   789999999999999999996 7       88999999887543210              


Q ss_pred             HHhhhcccCCCCCCchhhhccccCCCCCCccc-CCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCc-cchHHHH-Hc
Q 022360          166 VESAASTTTSANGPQIFDIIGHFAQPNPSLVA-LPKTPIACKPSELAIEKALKIASINPQRTLFFEDSV-RNIQAGK-RV  242 (298)
Q Consensus       166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~kp~~~~~~~~l~~l~i~p~~~i~iGDs~-~Di~~a~-~a  242 (298)
                            .+.++..-++-.-.+.. .+  +.+. +.+|....-   -.+..+.+.+++.+++++||||+. .||..++ .+
T Consensus       248 ------F~~~~pf~~v~~~~g~~-~~--~~~~~l~~g~vY~g---Gn~~~~~~~l~~~~~~vlYvGD~i~~Di~~~kk~~  315 (343)
T TIGR02244       248 ------FTEGRPFRQVDVETGSL-KW--GEVDGLEPGKVYSG---GSLKQFHELLKWRGKEVLYFGDHIYGDLLRSKKKR  315 (343)
T ss_pred             ------cCCCCceEEEeCCCCcc-cC--CccccccCCCeEeC---CCHHHHHHHHCCCCCcEEEECCcchHHHHhhHHhc
Confidence                  00000000000000000 00  0000 111111112   235667778899999999999999 9999998 99


Q ss_pred             CCeEEEecC
Q 022360          243 GLDTVLIGK  251 (298)
Q Consensus       243 G~~~v~v~~  251 (298)
                      ||.++++..
T Consensus       316 Gw~TvlI~p  324 (343)
T TIGR02244       316 GWRTAAIIP  324 (343)
T ss_pred             CcEEEEEch
Confidence            999998744

A TIGRFAMs model (TIGR01993) represents a (putative) family of _pyrimidine_ 5'-nucleotidases which are also subfamily I HAD's, which should not be confused with the current model.

>COG0241 HisB Histidinol phosphatase and related phosphatases [Amino acid transport and metabolism]

Probab=99.09  E-value=2.5e-09  Score=90.82  Aligned_cols=68  Identities=24%  Similarity=0.345  Sum_probs=57.6

Q ss_pred             CCCCCHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHHcCCeEEEecCCCC-----CCCCCEEeCCHHHHHHH
Q 022360          204 ACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTVLIGKSQR-----VKGADYAFESIHNIKEA  271 (298)
Q Consensus       204 ~~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a~~aG~~~v~v~~~~~-----~~~ad~i~~s~~~l~~~  271 (298)
                      ++||++-++..+++++++++++.++|||+.+|+++|.++|+..+.+..+..     ....+.+++++.++...
T Consensus       103 cRKP~~gm~~~~~~~~~iD~~~s~~VGD~~~Dlq~a~n~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  175 (181)
T COG0241         103 CRKPKPGMLLSALKEYNIDLSRSYVVGDRLTDLQAAENAGIKGVLVLTGIGVTTDGAGRAKWVFDSLAEFANL  175 (181)
T ss_pred             ccCCChHHHHHHHHHhCCCccceEEecCcHHHHHHHHHCCCCceEEEcCcccccccccccccccccHHHHHHH
Confidence            589999999999999999999999999999999999999999877755432     23467788888777633

>TIGR01544 HAD-SF-IE haloacid dehalogenase superfamily, subfamily IE hydrolase, TIGR01544

Probab=99.09  E-value=1.6e-09  Score=98.08  Aligned_cols=118  Identities=10%  Similarity=0.044  Sum_probs=81.8

Q ss_pred             cCCCChhhHHHHhhcccCCCCCCCChhHHHHHHhCC---CcEEEEeCCChHHHHHHHHHhCCCCccceeEeec----CCC
Q 022360           77 GYDFDYDDYHSFVHGRLPYENLKPDPVLRSLLLSLP---LRKIIFTNADKVHAVKVLSRLGLEDCFEGIICFE----TLN  149 (298)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~L~~l~---~~~~ivS~~~~~~~~~~l~~l~l~~~f~~i~~~~----~~~  149 (298)
                      +..++.+.+.+.+.+    ..+.+.||+.++++.|+   ++++|+|++....++.+++++++...+..+++..    +.+
T Consensus       103 ~~~~~~e~i~~~v~~----~~l~l~pG~~efl~~L~~~GIpv~IvS~G~~~~Ie~vL~~lgl~~~~~~IvSN~L~f~~dG  178 (277)
T TIGR01544       103 QQAFPKAKIKEIVAE----SDVMLKDGYENFFDKLQQHSIPVFIFSAGIGNVLEEVLRQAGVYHPNVKVVSNFMDFDEDG  178 (277)
T ss_pred             cCCCCHHHHHHHHhh----cCCccCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHHcCCCCcCceEEeeeEEECCCC
Confidence            445556666666653    45788999999998874   7899999999999999999999875555553321    111


Q ss_pred             CCCCCCCCCChhhHHHHHhhhcccCCCCCCchhhhccccCCCCCCcccCCCCCCCCCCCH-HHHHHHHHHcC--CCCCcE
Q 022360          150 PTHKNTVSDDEDDIAFVESAASTTTSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSE-LAIEKALKIAS--INPQRT  226 (298)
Q Consensus       150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~-~~~~~~l~~l~--i~p~~~  226 (298)
                      ...|                                            ++.+.++.-.|. ..++.+.+.++  ..+++|
T Consensus       179 vltG--------------------------------------------~~~P~i~~~~K~~~v~~~~~~~~~~~~~~~~v  214 (277)
T TIGR01544       179 VLKG--------------------------------------------FKGPLIHTFNKNHDVALRNTEYFNQLKDRSNI  214 (277)
T ss_pred             eEeC--------------------------------------------CCCCcccccccHHHHHHHHHHHhCccCCcceE
Confidence            1101                                            010011122333 45667888888  899999


Q ss_pred             EEEcCCccchHHHHHc
Q 022360          227 LFFEDSVRNIQAGKRV  242 (298)
Q Consensus       227 i~iGDs~~Di~~a~~a  242 (298)
                      +++|||.+|+.||.-+
T Consensus       215 I~vGDs~~Dl~ma~g~  230 (277)
T TIGR01544       215 ILLGDSQGDLRMADGV  230 (277)
T ss_pred             EEECcChhhhhHhcCC
Confidence            9999999999997665

This group of sequences was found during searches for members of the haloacid dehalogenase (HAD) superfamily. All of the conserved catalytic motifs are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches (IA, TIGR01493, TIGR01509, TIGR01549; IB, TIGR01488; IC, TIGR01494; ID, TIGR01658; IF TIGR01545) of that subfamily as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.

>COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only]

Probab=99.05  E-value=7.5e-11  Score=96.39  Aligned_cols=97  Identities=23%  Similarity=0.346  Sum_probs=80.4

Q ss_pred             HHHHHhCCCcEEEEeCCChHHHHHHHHHhCCCCccceeEeecCCCCCCCCCCCCChhhHHHHHhhhcccCCCCCCchhhh
Q 022360          105 RSLLLSLPLRKIIFTNADKVHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSDDEDDIAFVESAASTTTSANGPQIFDI  184 (298)
Q Consensus       105 ~~~L~~l~~~~~ivS~~~~~~~~~~l~~l~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  184 (298)
                      ..+|..++++++|+|+.+...++...+.+|+..+|-+                                           
T Consensus        44 ik~l~~~Gi~vAIITGr~s~ive~Ra~~LGI~~~~qG-------------------------------------------   80 (170)
T COG1778          44 IKLLLKSGIKVAIITGRDSPIVEKRAKDLGIKHLYQG-------------------------------------------   80 (170)
T ss_pred             HHHHHHcCCeEEEEeCCCCHHHHHHHHHcCCceeeec-------------------------------------------
Confidence            4678889999999999999999999999999765422                                           


Q ss_pred             ccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHHcCCeEEEecC-CCCCCCCCEEeC
Q 022360          185 IGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTVLIGK-SQRVKGADYAFE  263 (298)
Q Consensus       185 ~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a~~aG~~~v~v~~-~~~~~~ad~i~~  263 (298)
                                          .+.|..++..+++++++.+++|.|+||..+|+..+..+|++++.... +..+..++|+..
T Consensus        81 --------------------~~dK~~a~~~L~~~~~l~~e~~ayiGDD~~Dlpvm~~vGls~a~~dAh~~v~~~a~~Vt~  140 (170)
T COG1778          81 --------------------ISDKLAAFEELLKKLNLDPEEVAYVGDDLVDLPVMEKVGLSVAVADAHPLLKQRADYVTS  140 (170)
T ss_pred             --------------------hHhHHHHHHHHHHHhCCCHHHhhhhcCccccHHHHHHcCCcccccccCHHHHHhhHhhhh
Confidence                                35667999999999999999999999999999999999999875432 233566677655


Q ss_pred             C
Q 022360          264 S  264 (298)
Q Consensus       264 s  264 (298)
                      .
T Consensus       141 ~  141 (170)
T COG1778         141 K  141 (170)
T ss_pred             c
Confidence            3

>KOG3120 consensus Predicted haloacid dehalogenase-like hydrolase [General function prediction only]

Probab=99.05  E-value=5.1e-09  Score=90.24  Aligned_cols=164  Identities=14%  Similarity=0.220  Sum_probs=106.4

Q ss_pred             ChhhHHHHhhcccCCCCCCCChhHHHHHHhCC----CcEEEEeCCChHHHHHHHHHhCCCCccceeEeecCCCCCCCCCC
Q 022360           81 DYDDYHSFVHGRLPYENLKPDPVLRSLLLSLP----LRKIIFTNADKVHAVKVLSRLGLEDCFEGIICFETLNPTHKNTV  156 (298)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~g~~~~L~~l~----~~~~ivS~~~~~~~~~~l~~l~l~~~f~~i~~~~~~~~~~~~~~  156 (298)
                      ..+++.+.+.      .++..||+.++++.+.    +.+.|+|..+...++..++++++.++|..|++....--      
T Consensus        72 ~~~~ik~~~r------~iP~~Pgmv~lik~~ak~g~~eliIVSDaNsfFIe~~Lea~~~~d~F~~IfTNPa~~d------  139 (256)
T KOG3120|consen   72 RIAEIKQVLR------SIPIVPGMVRLIKSAAKLGCFELIIVSDANSFFIEEILEAAGIHDLFSEIFTNPACVD------  139 (256)
T ss_pred             CHHHHHHHHh------cCCCCccHHHHHHHHHhCCCceEEEEecCchhHHHHHHHHccHHHHHHHHhcCCcccC------
Confidence            3555555543      4788999999999874    46789999999999999999999999998887653211      


Q ss_pred             CCChhhHHHHHhhhcccCCCCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHH---HcCCCCCcEEEEcCCc
Q 022360          157 SDDEDDIAFVESAASTTTSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALK---IASINPQRTLFFEDSV  233 (298)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~---~l~i~p~~~i~iGDs~  233 (298)
                        ..+-+              .+..++-++.=..-++++         ||.  ..+..+..   +-|+..++++|+||+-
T Consensus       140 --a~G~L--------------~v~pyH~~hsC~~CPsNm---------CKg--~Vl~~~~~s~~~~gv~yer~iYvGDG~  192 (256)
T KOG3120|consen  140 --ASGRL--------------LVRPYHTQHSCNLCPSNM---------CKG--LVLDELVASQLKDGVRYERLIYVGDGA  192 (256)
T ss_pred             --CCCcE--------------EeecCCCCCccCcCchhh---------hhh--HHHHHHHHHHhhcCCceeeEEEEcCCC
Confidence              00000              111222212111122222         343  34444433   4577888999999999


Q ss_pred             cchHHHHHc-CCeEEEecCCCC-----------CCCCCEEeCCHHHHHHHhHHhhccCcccc
Q 022360          234 RNIQAGKRV-GLDTVLIGKSQR-----------VKGADYAFESIHNIKEAIPELWESDMKSE  283 (298)
Q Consensus       234 ~Di~~a~~a-G~~~v~v~~~~~-----------~~~ad~i~~s~~~l~~~l~~~~~~~~~~~  283 (298)
                      ||+-..... +..+++..++..           ....-....|-.|+...|.+++...+.++
T Consensus       193 nD~CP~l~Lr~~D~ampRkgfpl~k~~~~~p~~~kasV~~W~sg~d~~~~L~~lik~~~~~~  254 (256)
T KOG3120|consen  193 NDFCPVLRLRACDVAMPRKGFPLWKLISANPMLLKASVLEWSSGEDLERILQQLIKTIQVEE  254 (256)
T ss_pred             CCcCcchhcccCceecccCCCchHhhhhcCcceeeeeEEecccHHHHHHHHHHHHHHhhhcc
Confidence            999876655 556777766653           12234467788889988888877665543

>TIGR01460 HAD-SF-IIA Haloacid Dehalogenase Superfamily Class (subfamily) IIA

Probab=99.04  E-value=4.1e-09  Score=93.88  Aligned_cols=48  Identities=29%  Similarity=0.487  Sum_probs=45.0

Q ss_pred             CCCCHHHHHHHHHHcCCCCCcE-EEEcCCc-cchHHHHHcCCeEEEecCC
Q 022360          205 CKPSELAIEKALKIASINPQRT-LFFEDSV-RNIQAGKRVGLDTVLIGKS  252 (298)
Q Consensus       205 ~kp~~~~~~~~l~~l~i~p~~~-i~iGDs~-~Di~~a~~aG~~~v~v~~~  252 (298)
                      +||++..++.++++++++++++ +||||+. +||.+|+++|+.++++.+|
T Consensus       187 ~KP~~~~~~~~~~~~~~~~~~~~~~IGD~~~~Di~~A~~~G~~~i~v~~G  236 (236)
T TIGR01460       187 GKPSPAIYRAALNLLQARPERRDVMVGDNLRTDILGAKNAGFDTLLVLTG  236 (236)
T ss_pred             cCCCHHHHHHHHHHhCCCCccceEEECCCcHHHHHHHHHCCCcEEEEecC
Confidence            7999999999999999998887 9999998 8999999999999998664

Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant.

>TIGR01663 PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase

Probab=99.03  E-value=1.5e-09  Score=106.46  Aligned_cols=89  Identities=22%  Similarity=0.263  Sum_probs=71.8

Q ss_pred             CChhHHHHHHhC---CCcEEEEeCCCh------------HHHHHHHHHhCCCCccceeEeecCCCCCCCCCCCCChhhHH
Q 022360          100 PDPVLRSLLLSL---PLRKIIFTNADK------------VHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSDDEDDIA  164 (298)
Q Consensus       100 ~~~g~~~~L~~l---~~~~~ivS~~~~------------~~~~~~l~~l~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~  164 (298)
                      ++||+.+.|+.|   +++++|+||...            ..+..+++.+|+.  |+.+++.+....              
T Consensus       198 l~pgV~e~L~~L~~~Gy~IvIvTNQ~gI~~G~~~~~~~~~ki~~iL~~lgip--fdviia~~~~~~--------------  261 (526)
T TIGR01663       198 IFPEIPEKLKELEADGFKICIFTNQGGIARGKINADDFKAKIEAIVAKLGVP--FQVFIAIGAGFY--------------  261 (526)
T ss_pred             cccCHHHHHHHHHHCCCEEEEEECCcccccCcccHHHHHHHHHHHHHHcCCc--eEEEEeCCCCCC--------------
Confidence            467788888777   588999999766            3577888888885  776665543322              


Q ss_pred             HHHhhhcccCCCCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcC----CCCCcEEEEcCCccchHHHH
Q 022360          165 FVESAASTTTSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIAS----INPQRTLFFEDSVRNIQAGK  240 (298)
Q Consensus       165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~----i~p~~~i~iGDs~~Di~~a~  240 (298)
                                                              +||+|.++..++++++    +++++++||||...|+.+++
T Consensus       262 ----------------------------------------RKP~pGm~~~a~~~~~~~~~Id~~~S~~VGDaagr~~~g~  301 (526)
T TIGR01663       262 ----------------------------------------RKPLTGMWDHLKEEANDGTEIQEDDCFFVGDAAGRPANGK  301 (526)
T ss_pred             ----------------------------------------CCCCHHHHHHHHHhcCcccCCCHHHeEEeCCcccchHHHH
Confidence                                                    7999999999999985    89999999999999998877


Q ss_pred             HcCC
Q 022360          241 RVGL  244 (298)
Q Consensus       241 ~aG~  244 (298)
                      ++|-
T Consensus       302 ~ag~  305 (526)
T TIGR01663       302 AAGK  305 (526)
T ss_pred             hcCC
Confidence            7764

Note that the EC number for the kinase function is: 2.7.1.78

>PRK08238 hypothetical protein; Validated

Probab=99.03  E-value=5.5e-09  Score=101.91  Aligned_cols=96  Identities=17%  Similarity=0.209  Sum_probs=72.5

Q ss_pred             CCCCChhHHHHHHhCC---CcEEEEeCCChHHHHHHHHHhCCCCccceeEeecCCCCCCCCCCCCChhhHHHHHhhhccc
Q 022360           97 NLKPDPVLRSLLLSLP---LRKIIFTNADKVHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSDDEDDIAFVESAASTT  173 (298)
Q Consensus        97 ~~~~~~g~~~~L~~l~---~~~~ivS~~~~~~~~~~l~~l~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  173 (298)
                      .++..|++.++|+.++   .+++++|+++...++..++++|+   |+.++++++...                       
T Consensus        70 ~lp~~pga~e~L~~lk~~G~~v~LaTas~~~~a~~i~~~lGl---Fd~Vigsd~~~~-----------------------  123 (479)
T PRK08238         70 TLPYNEEVLDYLRAERAAGRKLVLATASDERLAQAVAAHLGL---FDGVFASDGTTN-----------------------  123 (479)
T ss_pred             hCCCChhHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCC---CCEEEeCCCccc-----------------------
Confidence            4567799999999874   67899999999999999999987   888998875432                       


Q ss_pred             CCCCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHHcCCeEEEecCCC
Q 022360          174 TSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTVLIGKSQ  253 (298)
Q Consensus       174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a~~aG~~~v~v~~~~  253 (298)
                                                     +||++.. ..+.+.++  .++++++||+.+|+.+++.+| ..+.++.+.
T Consensus       124 -------------------------------~kg~~K~-~~l~~~l~--~~~~~yvGDS~~Dlp~~~~A~-~av~Vn~~~  168 (479)
T PRK08238        124 -------------------------------LKGAAKA-AALVEAFG--ERGFDYAGNSAADLPVWAAAR-RAIVVGASP  168 (479)
T ss_pred             -------------------------------cCCchHH-HHHHHHhC--ccCeeEecCCHHHHHHHHhCC-CeEEECCCH
Confidence                                           3443332 22335554  356899999999999999999 555565543

>TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family

Probab=99.03  E-value=6.1e-10  Score=100.14  Aligned_cols=71  Identities=15%  Similarity=0.075  Sum_probs=58.3

Q ss_pred             CCCCHHHHHHHHHHcCCC--CCcEEEEcCCccchHHHHHcCCeEEEecCC----CCCCC--C-CEEeCCHHH--HHHHhH
Q 022360          205 CKPSELAIEKALKIASIN--PQRTLFFEDSVRNIQAGKRVGLDTVLIGKS----QRVKG--A-DYAFESIHN--IKEAIP  273 (298)
Q Consensus       205 ~kp~~~~~~~~l~~l~i~--p~~~i~iGDs~~Di~~a~~aG~~~v~v~~~----~~~~~--a-d~i~~s~~~--l~~~l~  273 (298)
                      +-+|..+++++++++|++  ++++++|||+.||+.|++.+|.+++|.+..    ..+..  + ++++.+.++  +.+.|+
T Consensus       174 ~~~Kg~ai~~l~~~~~i~~~~~~~~a~GD~~ND~~Ml~~ag~~vam~Na~~~~~~lk~~~~a~~~vt~~~~~dGva~~l~  253 (256)
T TIGR01486       174 GSDKGKAANALKQFYNQPGGAIKVVGLGDSPNDLPLLEVVDLAVVVPGPNGPNVSLKPGDPGSFLLTPAPGPEGWREALE  253 (256)
T ss_pred             CCCHHHHHHHHHHHHhhcCCCceEEEEcCCHhhHHHHHHCCEEEEeCCCCCCccccCccCCCcEEEcCCCCcHHHHHHHH
Confidence            477889999999999999  999999999999999999999999998765    34554  3 488866443  777776


Q ss_pred             Hh
Q 022360          274 EL  275 (298)
Q Consensus       274 ~~  275 (298)
                      ++
T Consensus       254 ~~  255 (256)
T TIGR01486       254 HL  255 (256)
T ss_pred             Hh
Confidence            65

This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta

>PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification []

Probab=99.02  E-value=4.1e-11  Score=105.58  Aligned_cols=63  Identities=24%  Similarity=0.266  Sum_probs=55.7

Q ss_pred             CCCCHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHHcCCeEEEecCCC-CCCCCCEEeCCHHH
Q 022360          205 CKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTVLIGKSQ-RVKGADYAFESIHN  267 (298)
Q Consensus       205 ~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a~~aG~~~v~v~~~~-~~~~ad~i~~s~~~  267 (298)
                      +-.|..+++.+++.+|++++++++|||+.||+.|.+.+|.++++.+..+ .+..|++++.+.++
T Consensus       184 ~vsK~~ai~~l~~~~~i~~~~~~~~GD~~ND~~Ml~~~~~~~am~na~~~~k~~a~~i~~~~~~  247 (254)
T PF08282_consen  184 GVSKGSAIKYLLEYLGISPEDIIAFGDSENDIEMLELAGYSVAMGNATPELKKAADYITPSNND  247 (254)
T ss_dssp             TSSHHHHHHHHHHHHTTSGGGEEEEESSGGGHHHHHHSSEEEEETTS-HHHHHHSSEEESSGTC
T ss_pred             CCCHHHHHHHHhhhcccccceeEEeecccccHhHHhhcCeEEEEcCCCHHHHHhCCEEecCCCC
Confidence            4778899999999999999999999999999999999999988875544 48889999988776

This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A ....

>TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial

Probab=98.94  E-value=2.1e-09  Score=95.45  Aligned_cols=70  Identities=17%  Similarity=0.068  Sum_probs=56.0

Q ss_pred             CCCCHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHHcCCeEEEecCCC-CCCCCC----EEeCCHH--HHHHHhHH
Q 022360          205 CKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTVLIGKSQ-RVKGAD----YAFESIH--NIKEAIPE  274 (298)
Q Consensus       205 ~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a~~aG~~~v~v~~~~-~~~~ad----~i~~s~~--~l~~~l~~  274 (298)
                      +.+|+.+++.+++++|++++++++|||+.||+.|++.+|.++++.+... .+..++    +++.+..  .+.+.|.+
T Consensus       157 ~~~K~~al~~l~~~~g~~~~~~i~~GD~~nD~~ml~~~~~~iav~na~~~~k~~a~~~~~~v~~~~~~~Gv~~~i~~  233 (236)
T TIGR02471       157 RASKGLALRYLSYRWGLPLEQILVAGDSGNDEEMLRGLTLGVVVGNHDPELEGLRHQQRIYFANNPHAFGILEGINH  233 (236)
T ss_pred             CCChHHHHHHHHHHhCCCHHHEEEEcCCccHHHHHcCCCcEEEEcCCcHHHHHhhcCCcEEEcCCCChhHHHHHHHh
Confidence            5899999999999999999999999999999999999998888764433 355566    6666532  36666654

Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472.

>TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB

Probab=98.93  E-value=6e-08  Score=84.92  Aligned_cols=104  Identities=10%  Similarity=-0.014  Sum_probs=68.5

Q ss_pred             CCCChhHHHHHH-hC---CCcEEEEeCCChHHHHHHHHHhCCCCccceeEeecCCCCCCCCCCCCChhhHHHHHhhhccc
Q 022360           98 LKPDPVLRSLLL-SL---PLRKIIFTNADKVHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSDDEDDIAFVESAASTT  173 (298)
Q Consensus        98 ~~~~~g~~~~L~-~l---~~~~~ivS~~~~~~~~~~l~~l~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  173 (298)
                      ..++|++.+.|+ .+   +.+++|+|++...+++.+.+..++... +.+++.+ +....|                    
T Consensus        93 ~~l~pga~e~L~~~l~~~G~~v~IvSas~~~~~~~ia~~~~~~~~-~~~i~t~-le~~~g--------------------  150 (210)
T TIGR01545        93 VTAFPLVAERLRQYLESSDADIWLITGSPQPLVEAVYFDSNFIHR-LNLIASQ-IERGNG--------------------  150 (210)
T ss_pred             CCCCccHHHHHHHHHHhCCCEEEEEcCCcHHHHHHHHHhcccccc-CcEEEEE-eEEeCC--------------------
Confidence            367999999995 43   578999999999999999988766432 3344432 111000                    


Q ss_pred             CCCCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHHcCCeEEE
Q 022360          174 TSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTVL  248 (298)
Q Consensus       174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a~~aG~~~v~  248 (298)
                                  |...++|          -.+..|...++.++   +.+...+.+.|||.+|+.|...+|-+.+.
T Consensus       151 ------------g~~~g~~----------c~g~~Kv~rl~~~~---~~~~~~~~aYsDS~~D~pmL~~a~~~~~V  200 (210)
T TIGR01545       151 ------------GWVLPLR----------CLGHEKVAQLEQKI---GSPLKLYSGYSDSKQDNPLLAFCEHRWRV  200 (210)
T ss_pred             ------------ceEcCcc----------CCChHHHHHHHHHh---CCChhheEEecCCcccHHHHHhCCCcEEE
Confidence                        0011111          11445555565555   44667789999999999999999977663

The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene.

>COG4359 Uncharacterized conserved protein [Function unknown]

Probab=98.90  E-value=1.8e-08  Score=84.51  Aligned_cols=140  Identities=16%  Similarity=0.157  Sum_probs=88.9

Q ss_pred             CCCCCChhHHHHHHhCC---CcEEEEeCCChHHHHHHHHHhCCCCcccee-EeecCCCCCCCCCCCCChhhHHHHHhhhc
Q 022360           96 ENLKPDPVLRSLLLSLP---LRKIIFTNADKVHAVKVLSRLGLEDCFEGI-ICFETLNPTHKNTVSDDEDDIAFVESAAS  171 (298)
Q Consensus        96 ~~~~~~~g~~~~L~~l~---~~~~ivS~~~~~~~~~~l~~l~l~~~f~~i-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  171 (298)
                      ..+...||++++.++++   ++++|+|+++...+.++++.+.-.+-++.+ +.+++...                     
T Consensus        70 k~i~Idp~fKef~e~ike~di~fiVvSsGm~~fI~~lfe~ivgke~i~~idi~sn~~~i---------------------  128 (220)
T COG4359          70 KDIKIDPGFKEFVEWIKEHDIPFIVVSSGMDPFIYPLFEGIVGKERIYCIDIVSNNDYI---------------------  128 (220)
T ss_pred             hhcccCccHHHHHHHHHHcCCCEEEEeCCCchHHHHHHHhhccccceeeeEEeecCceE---------------------
Confidence            34688899999999885   889999999999999999988633322221 11111111                     


Q ss_pred             ccCCCCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHHcCCeEE---E
Q 022360          172 TTTSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTV---L  248 (298)
Q Consensus       172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a~~aG~~~v---~  248 (298)
                                 ++.+--      ++..++---++--|+..+..    +.-+++.++|+|||..|+.+|+..-+-++   +
T Consensus       129 -----------h~dg~h------~i~~~~ds~fG~dK~~vI~~----l~e~~e~~fy~GDsvsDlsaaklsDllFAK~~L  187 (220)
T COG4359         129 -----------HIDGQH------SIKYTDDSQFGHDKSSVIHE----LSEPNESIFYCGDSVSDLSAAKLSDLLFAKDDL  187 (220)
T ss_pred             -----------cCCCce------eeecCCccccCCCcchhHHH----hhcCCceEEEecCCcccccHhhhhhhHhhHHHH
Confidence                       000000      00000000012333344443    44577889999999999999998765444   1


Q ss_pred             ecCCCCCCCCCEEeCCHHHHHHHhHHhhc
Q 022360          249 IGKSQRVKGADYAFESIHNIKEAIPELWE  277 (298)
Q Consensus       249 v~~~~~~~~ad~i~~s~~~l~~~l~~~~~  277 (298)
                      ++.-.++..+..-++++.|+..-+++++.
T Consensus       188 ~nyc~eqn~~f~~fe~F~eIlk~iekvl~  216 (220)
T COG4359         188 LNYCREQNLNFLEFETFYEILKEIEKVLE  216 (220)
T ss_pred             HHHHHHcCCCCcccccHHHHHHHHHHHHh
Confidence            23334578888889999999988888865

>PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional

Probab=98.85  E-value=5.9e-09  Score=104.01  Aligned_cols=48  Identities=15%  Similarity=0.039  Sum_probs=42.6

Q ss_pred             CCCCHHHHHHHHHHcCCCCCcEEEE--cCCccchHHHHHcCCeEEEecCC
Q 022360          205 CKPSELAIEKALKIASINPQRTLFF--EDSVRNIQAGKRVGLDTVLIGKS  252 (298)
Q Consensus       205 ~kp~~~~~~~~l~~l~i~p~~~i~i--GDs~~Di~~a~~aG~~~v~v~~~  252 (298)
                      +-.|..+++.+++.++++.++++.|  ||+.||+.|.+.+|.++++-+..
T Consensus       611 gvdKG~AL~~L~e~~gI~~~eViafalGDs~NDisMLe~Ag~gVAM~~~~  660 (694)
T PRK14502        611 GNDKGKAIKILNELFRLNFGNIHTFGLGDSENDYSMLETVDSPILVQRPG  660 (694)
T ss_pred             CCCHHHHHHHHHHHhCCCccceEEEEcCCcHhhHHHHHhCCceEEEcCCC
Confidence            4677799999999999999999999  99999999999999999985443

>PF12689 Acid_PPase: Acid Phosphatase; InterPro: IPR010036 This entry represents two closely related clades of sequences from eukaryotes and archaea

Probab=98.85  E-value=1.3e-09  Score=91.92  Aligned_cols=99  Identities=19%  Similarity=0.335  Sum_probs=68.7

Q ss_pred             CCCCCChhHHHHHHhCC---CcEEEEeC-CChHHHHHHHHHhCCC----------CccceeEeecCCCCCCCCCCCCChh
Q 022360           96 ENLKPDPVLRSLLLSLP---LRKIIFTN-ADKVHAVKVLSRLGLE----------DCFEGIICFETLNPTHKNTVSDDED  161 (298)
Q Consensus        96 ~~~~~~~g~~~~L~~l~---~~~~ivS~-~~~~~~~~~l~~l~l~----------~~f~~i~~~~~~~~~~~~~~~~~~~  161 (298)
                      ..+.++|++.+.|..|+   .+++++|. ..+..++.+|+.+++.          ++|+..-..                
T Consensus        42 ~~v~lypdv~~iL~~L~~~gv~lavASRt~~P~~A~~~L~~l~i~~~~~~~~~~~~~F~~~eI~----------------  105 (169)
T PF12689_consen   42 EEVSLYPDVPEILQELKERGVKLAVASRTDEPDWARELLKLLEIDDADGDGVPLIEYFDYLEIY----------------  105 (169)
T ss_dssp             -EE---TTHHHHHHHHHHCT--EEEEE--S-HHHHHHHHHHTT-C----------CCECEEEES----------------
T ss_pred             CEEEeCcCHHHHHHHHHHCCCEEEEEECCCChHHHHHHHHhcCCCccccccccchhhcchhhee----------------
Confidence            45678888888888874   78999995 5567889999999998          666653321                


Q ss_pred             hHHHHHhhhcccCCCCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHH
Q 022360          162 DIAFVESAASTTTSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKR  241 (298)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a~~  241 (298)
                                                                 .-+|...|+.+.++.|++++++++|.|..+++.....
T Consensus       106 -------------------------------------------~gsK~~Hf~~i~~~tgI~y~eMlFFDDe~~N~~~v~~  142 (169)
T PF12689_consen  106 -------------------------------------------PGSKTTHFRRIHRKTGIPYEEMLFFDDESRNIEVVSK  142 (169)
T ss_dssp             -------------------------------------------SS-HHHHHHHHHHHH---GGGEEEEES-HHHHHHHHT
T ss_pred             -------------------------------------------cCchHHHHHHHHHhcCCChhHEEEecCchhcceeeEe
Confidence                                                       3467799999999999999999999999999999999


Q ss_pred             cCCeEEEecCCC
Q 022360          242 VGLDTVLIGKSQ  253 (298)
Q Consensus       242 aG~~~v~v~~~~  253 (298)
                      .|+.++++..|-
T Consensus       143 lGV~~v~v~~Gl  154 (169)
T PF12689_consen  143 LGVTCVLVPDGL  154 (169)
T ss_dssp             TT-EEEE-SSS-
T ss_pred             cCcEEEEeCCCC
Confidence            999999987754

The mouse enzyme has been characterised as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues [, ].; GO: 0016791 phosphatase activity; PDB: 1U7P_A 1U7O_A 2WM8_A.

>PTZ00445 p36-lilke protein; Provisional

Probab=98.85  E-value=1.3e-08  Score=87.91  Aligned_cols=49  Identities=18%  Similarity=0.329  Sum_probs=45.2

Q ss_pred             CCCCHHH--H--HHHHHHcCCCCCcEEEEcCCccchHHHHHcCCeEEEecCCC
Q 022360          205 CKPSELA--I--EKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTVLIGKSQ  253 (298)
Q Consensus       205 ~kp~~~~--~--~~~l~~l~i~p~~~i~iGDs~~Di~~a~~aG~~~v~v~~~~  253 (298)
                      .||.|..  |  +++++++|++|++|++|+|+..++++|++.|+.++.+..+.
T Consensus       156 ~KPdp~iK~yHle~ll~~~gl~peE~LFIDD~~~NVeaA~~lGi~ai~f~~~e  208 (219)
T PTZ00445        156 DAPMPLDKSYHLKQVCSDFNVNPDEILFIDDDMNNCKNALKEGYIALHVTGNE  208 (219)
T ss_pred             cCCCccchHHHHHHHHHHcCCCHHHeEeecCCHHHHHHHHHCCCEEEEcCChH
Confidence            6888888  8  99999999999999999999999999999999999886543

>TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase

Probab=98.84  E-value=1.9e-08  Score=90.08  Aligned_cols=48  Identities=19%  Similarity=0.225  Sum_probs=41.2

Q ss_pred             CCCCHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHHcCCeEEEecCC
Q 022360          205 CKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTVLIGKS  252 (298)
Q Consensus       205 ~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a~~aG~~~v~v~~~  252 (298)
                      +.+|+.+++.+++++++++++|++|||+.||+.|++.+|..++.+..+
T Consensus       165 ~~~K~~al~~l~~~~~i~~~~~i~~GD~~ND~~ml~~~~~~~va~~na  212 (249)
T TIGR01485       165 GSGKGQALQYLLQKLAMEPSQTLVCGDSGNDIELFEIGSVRGVIVSNA  212 (249)
T ss_pred             CCChHHHHHHHHHHcCCCccCEEEEECChhHHHHHHccCCcEEEECCC
Confidence            589999999999999999999999999999999999965554444433

Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.

>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459

Probab=98.83  E-value=2.9e-08  Score=88.60  Aligned_cols=87  Identities=16%  Similarity=0.032  Sum_probs=67.2

Q ss_pred             CCChhHHHHHHhC---CCcEEEEeCCChHHHH--HHHHHhCCCC-ccceeEeecCCCCCCCCCCCCChhhHHHHHhhhcc
Q 022360           99 KPDPVLRSLLLSL---PLRKIIFTNADKVHAV--KVLSRLGLED-CFEGIICFETLNPTHKNTVSDDEDDIAFVESAAST  172 (298)
Q Consensus        99 ~~~~g~~~~L~~l---~~~~~ivS~~~~~~~~--~~l~~l~l~~-~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  172 (298)
                      .++||+.++|++|   +++++++||+......  ..++++|+.. +|+.++++.+...                      
T Consensus        24 ~~~pga~e~L~~L~~~G~~~~ivTN~~~~~~~~~~~L~~~gl~~~~~~~Ii~s~~~~~----------------------   81 (242)
T TIGR01459        24 HTYPGAVQNLNKIIAQGKPVYFVSNSPRNIFSLHKTLKSLGINADLPEMIISSGEIAV----------------------   81 (242)
T ss_pred             ccCccHHHHHHHHHHCCCEEEEEeCCCCChHHHHHHHHHCCCCccccceEEccHHHHH----------------------
Confidence            3456777777666   4789999998776655  7889999987 8999998764321                      


Q ss_pred             cCCCCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHHcCC
Q 022360          173 TTSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGL  244 (298)
Q Consensus       173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a~~aG~  244 (298)
                                                           ..+..+++++++.|.++++|||+..|++.....|.
T Consensus        82 -------------------------------------~~l~~~~~~~~~~~~~~~~vGd~~~d~~~~~~~~~  116 (242)
T TIGR01459        82 -------------------------------------QMILESKKRFDIRNGIIYLLGHLENDIINLMQCYT  116 (242)
T ss_pred             -------------------------------------HHHHhhhhhccCCCceEEEeCCcccchhhhcCCCc
Confidence                                                 45777778889999999999999999988765554

This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)

>TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family

Probab=98.80  E-value=4.7e-08  Score=88.39  Aligned_cols=83  Identities=19%  Similarity=0.182  Sum_probs=61.0

Q ss_pred             CCCCChhHHHHHHhC---CCcEEEEeCCChHH---HHHHHHHhCCCCcc-ceeEeecCCCCCCCCCCCCChhhHHHHHhh
Q 022360           97 NLKPDPVLRSLLLSL---PLRKIIFTNADKVH---AVKVLSRLGLEDCF-EGIICFETLNPTHKNTVSDDEDDIAFVESA  169 (298)
Q Consensus        97 ~~~~~~g~~~~L~~l---~~~~~ivS~~~~~~---~~~~l~~l~l~~~f-~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~  169 (298)
                      ...+.||+.++|+.+   +.+++++|+.....   ....++.+|+..++ +.++..++                      
T Consensus       116 ~a~~ipGA~e~L~~L~~~G~~v~iVTnR~~~~~~~T~~~Lkk~Gi~~~~~d~lllr~~----------------------  173 (266)
T TIGR01533       116 QAKPVAGALDFLNYANSKGVKIFYVSNRSEKEKAATLKNLKRFGFPQADEEHLLLKKD----------------------  173 (266)
T ss_pred             CCCcCccHHHHHHHHHHCCCeEEEEeCCCcchHHHHHHHHHHcCcCCCCcceEEeCCC----------------------
Confidence            457899999999976   47899999977443   44677788886543 44444321                      


Q ss_pred             hcccCCCCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccchHHHH
Q 022360          170 ASTTTSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGK  240 (298)
Q Consensus       170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a~  240 (298)
                                                         .++|+.....+.+.+++    +++|||+.+|+..+.
T Consensus       174 -----------------------------------~~~K~~rr~~I~~~y~I----vl~vGD~~~Df~~~~  205 (266)
T TIGR01533       174 -----------------------------------KSSKESRRQKVQKDYEI----VLLFGDNLLDFDDFF  205 (266)
T ss_pred             -----------------------------------CCCcHHHHHHHHhcCCE----EEEECCCHHHhhhhh
Confidence                                               35667888888887777    999999999996543

which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles.

>COG4229 Predicted enolase-phosphatase [Energy production and conversion]

Probab=98.80  E-value=1.3e-07  Score=79.38  Aligned_cols=102  Identities=18%  Similarity=0.208  Sum_probs=80.2

Q ss_pred             CCCCChhHHHHHHhC---CCcEEEEeCCChHHHHHHHHHh---CCCCccceeEeecCCCCCCCCCCCCChhhHHHHHhhh
Q 022360           97 NLKPDPVLRSLLLSL---PLRKIIFTNADKVHAVKVLSRL---GLEDCFEGIICFETLNPTHKNTVSDDEDDIAFVESAA  170 (298)
Q Consensus        97 ~~~~~~g~~~~L~~l---~~~~~ivS~~~~~~~~~~l~~l---~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~  170 (298)
                      ...++|++.+.|++-   +.+++|+|++...-++-.+.+.   +|..+|++.+-.. .|                     
T Consensus       101 kahlypDav~~ik~wk~~g~~vyiYSSGSV~AQkL~Fghs~agdL~~lfsGyfDtt-iG---------------------  158 (229)
T COG4229         101 KAHLYPDAVQAIKRWKALGMRVYIYSSGSVKAQKLFFGHSDAGDLNSLFSGYFDTT-IG---------------------  158 (229)
T ss_pred             ccccCHhHHHHHHHHHHcCCcEEEEcCCCchhHHHhhcccccccHHhhhcceeecc-cc---------------------
Confidence            356799999999874   5889999999988666666554   3445555544221 11                     


Q ss_pred             cccCCCCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHHcCCeEEEec
Q 022360          171 STTTSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTVLIG  250 (298)
Q Consensus       171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a~~aG~~~v~v~  250 (298)
                                                        .|-....|.+++...|++|.+++++.|+.+.+.+|+.+|+.+.++.
T Consensus       159 ----------------------------------~KrE~~SY~kIa~~iGl~p~eilFLSDn~~EL~AA~~vGl~t~l~~  204 (229)
T COG4229         159 ----------------------------------KKRESQSYAKIAGDIGLPPAEILFLSDNPEELKAAAGVGLATGLAV  204 (229)
T ss_pred             ----------------------------------ccccchhHHHHHHhcCCCchheEEecCCHHHHHHHHhcchheeeee
Confidence                                              5777789999999999999999999999999999999999999986


Q ss_pred             CCCC
Q 022360          251 KSQR  254 (298)
Q Consensus       251 ~~~~  254 (298)
                      ++..
T Consensus       205 R~g~  208 (229)
T COG4229         205 RPGN  208 (229)
T ss_pred             cCCC
Confidence            6543

>PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B

Probab=98.79  E-value=6.8e-08  Score=82.24  Aligned_cols=95  Identities=20%  Similarity=0.264  Sum_probs=60.8

Q ss_pred             hhHHHHHHhC---CCcEEEEeCCChHHHHHHHHHhCCCCccceeEeecCCCCCCCCCCCCChhhHHHHHhhhcccCCCCC
Q 022360          102 PVLRSLLLSL---PLRKIIFTNADKVHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSDDEDDIAFVESAASTTTSANG  178 (298)
Q Consensus       102 ~g~~~~L~~l---~~~~~ivS~~~~~~~~~~l~~l~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  178 (298)
                      |++.++|+.+   +.+++|+|++....++++++.+++....  +++.+-... .                        +.
T Consensus        92 ~~~~e~i~~~~~~~~~v~IvS~~~~~~i~~~~~~~~i~~~~--v~~~~~~~~-~------------------------~~  144 (192)
T PF12710_consen   92 PDAMELIRELKDNGIKVVIVSGSPDEIIEPIAERLGIDDDN--VIGNELFDN-G------------------------GG  144 (192)
T ss_dssp             TTHHHHHHHHHHTTSEEEEEEEEEHHHHHHHHHHTTSSEGG--EEEEEEECT-T------------------------CC
T ss_pred             hhHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCceE--EEEEeeeec-c------------------------cc
Confidence            6666888665   6889999999999999999999987532  222221000 0                        00


Q ss_pred             CchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHH---HHHcCCCCCcEEEEcCCccchHHHH
Q 022360          179 PQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKA---LKIASINPQRTLFFEDSVRNIQAGK  240 (298)
Q Consensus       179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~---l~~l~i~p~~~i~iGDs~~Di~~a~  240 (298)
                      .....+.+               ...+ .|...++.+   ... +.++..+++||||.+|+.|++
T Consensus       145 ~~~~~~~~---------------~~~~-~K~~~l~~~~~~~~~-~~~~~~~~~iGDs~~D~~~lr  192 (192)
T PF12710_consen  145 IFTGRITG---------------SNCG-GKAEALKELYIRDEE-DIDPDRVIAIGDSINDLPMLR  192 (192)
T ss_dssp             EEEEEEEE---------------EEES-HHHHHHHHHHHHHHH-THTCCEEEEEESSGGGHHHHH
T ss_pred             eeeeeECC---------------CCCC-cHHHHHHHHHHHhhc-CCCCCeEEEEECCHHHHHHhC
Confidence            00000000               0001 256777777   444 788899999999999999985

>KOG3040 consensus Predicted sugar phosphatase (HAD superfamily) [General function prediction only]

Probab=98.75  E-value=5.6e-09  Score=89.26  Aligned_cols=69  Identities=17%  Similarity=0.358  Sum_probs=58.9

Q ss_pred             CCCCHHHHHHHHHHcCCCCCcEEEEcCCc-cchHHHHHcCCeEEEecCCCC--------CCCCCEEeCCHHHHHHHhH
Q 022360          205 CKPSELAIEKALKIASINPQRTLFFEDSV-RNIQAGKRVGLDTVLIGKSQR--------VKGADYAFESIHNIKEAIP  273 (298)
Q Consensus       205 ~kp~~~~~~~~l~~l~i~p~~~i~iGDs~-~Di~~a~~aG~~~v~v~~~~~--------~~~ad~i~~s~~~l~~~l~  273 (298)
                      +||++..|+.+++.+|++|++++||||.. .|+-.|++.||..+.+..|.-        ...||...+++.+--++|-
T Consensus       180 GKP~~~fFe~al~~~gv~p~~aVMIGDD~~dDvgGAq~~GMrgilVkTGK~rpsDe~k~~~~p~~~~d~f~~AVd~I~  257 (262)
T KOG3040|consen  180 GKPSPFFFESALQALGVDPEEAVMIGDDLNDDVGGAQACGMRGILVKTGKFRPSDEEKPPVPPDLTADNFADAVDLII  257 (262)
T ss_pred             cCCCHHHHHHHHHhcCCChHHheEEccccccchhhHhhhcceeEEeeccccCCcccccCCCCcchhhhhHHHHHHHHH
Confidence            79999999999999999999999999999 689999999999999966542        4567778888777555543

>PRK10187 trehalose-6-phosphate phosphatase; Provisional

Probab=98.73  E-value=1.4e-07  Score=85.55  Aligned_cols=70  Identities=13%  Similarity=0.175  Sum_probs=59.7

Q ss_pred             CCCCHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHHc----CCeEEEecCCCCCCCCCEEeCCHHHHHHHhHHhhc
Q 022360          205 CKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRV----GLDTVLIGKSQRVKGADYAFESIHNIKEAIPELWE  277 (298)
Q Consensus       205 ~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a~~a----G~~~v~v~~~~~~~~ad~i~~s~~~l~~~l~~~~~  277 (298)
                      +-.|..+++++++.+++..+++++|||+.||+.|++.+    |+.+++ +  .....|.+.+++.+++..+|..+..
T Consensus       172 g~~Kg~al~~ll~~~~~~~~~v~~~GD~~nD~~mf~~~~~~~g~~vav-g--~a~~~A~~~l~~~~~v~~~L~~l~~  245 (266)
T PRK10187        172 GTNKGEAIAAFMQEAPFAGRTPVFVGDDLTDEAGFAVVNRLGGISVKV-G--TGATQASWRLAGVPDVWSWLEMITT  245 (266)
T ss_pred             CCCHHHHHHHHHHhcCCCCCeEEEEcCCccHHHHHHHHHhcCCeEEEE-C--CCCCcCeEeCCCHHHHHHHHHHHHH
Confidence            36778999999999999999999999999999999998    655443 3  3356689999999999999988874

>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459

Probab=98.70  E-value=9.8e-09  Score=91.64  Aligned_cols=46  Identities=37%  Similarity=0.444  Sum_probs=42.4

Q ss_pred             CCCCHHHHHHHHHHcCCC-CCcEEEEcCCc-cchHHHHHcCCeEEEec
Q 022360          205 CKPSELAIEKALKIASIN-PQRTLFFEDSV-RNIQAGKRVGLDTVLIG  250 (298)
Q Consensus       205 ~kp~~~~~~~~l~~l~i~-p~~~i~iGDs~-~Di~~a~~aG~~~v~v~  250 (298)
                      +||+|..++.++++++.. +++|+||||+. +||.+|+++|+.++++.
T Consensus       194 gKP~~~~~~~~~~~~~~~~~~~~~~vGD~~~~Di~~a~~~G~~~i~v~  241 (242)
T TIGR01459       194 GKPYPAIFHKALKECSNIPKNRMLMVGDSFYTDILGANRLGIDTALVL  241 (242)
T ss_pred             CCCCHHHHHHHHHHcCCCCcccEEEECCCcHHHHHHHHHCCCeEEEEe
Confidence            799999999999999975 67899999995 99999999999999874

This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)

>PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases

Probab=98.68  E-value=1.5e-07  Score=79.29  Aligned_cols=45  Identities=24%  Similarity=0.420  Sum_probs=37.3

Q ss_pred             CCCHHHHHHHHHHcCC-----CCCcEEEEcCCc-cchHHHHHcCCeEEEecCC
Q 022360          206 KPSELAIEKALKIASI-----NPQRTLFFEDSV-RNIQAGKRVGLDTVLIGKS  252 (298)
Q Consensus       206 kp~~~~~~~~l~~l~i-----~p~~~i~iGDs~-~Di~~a~~aG~~~v~v~~~  252 (298)
                      ||  ..++.+++.++.     .|+++++|||.. +|+.+|+..|+.++++..|
T Consensus       116 KP--~~~~~i~~~~~~~~~~~~p~eiavIGDrl~TDVl~gN~~G~~tilv~~g  166 (168)
T PF09419_consen  116 KP--GCFREILKYFKCQKVVTSPSEIAVIGDRLFTDVLMGNRMGSYTILVTDG  166 (168)
T ss_pred             CC--ccHHHHHHHHhhccCCCCchhEEEEcchHHHHHHHhhccCceEEEEecC
Confidence            55  556666666654     499999999999 9999999999999998765

All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family.

>TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase

Probab=98.62  E-value=3.7e-08  Score=87.15  Aligned_cols=43  Identities=16%  Similarity=0.146  Sum_probs=37.4

Q ss_pred             CCCCHHHHHHHHHHcCC--CCCcEEEEcCCccchHHHHHcCCeEE
Q 022360          205 CKPSELAIEKALKIASI--NPQRTLFFEDSVRNIQAGKRVGLDTV  247 (298)
Q Consensus       205 ~kp~~~~~~~~l~~l~i--~p~~~i~iGDs~~Di~~a~~aG~~~v  247 (298)
                      +-.|+.+++.+++.+++  ++.+|++|||+.||+.|.+.+|++++
T Consensus       179 ~~sK~~al~~l~~~~~~~~~~~~~i~~GD~~nD~~ml~~ag~~v~  223 (225)
T TIGR02461       179 GSDKGKAIKRLLDLYKLRPGAIESVGLGDSENDFPMFEVVDLAFL  223 (225)
T ss_pred             CCCHHHHHHHHHHHhccccCcccEEEEcCCHHHHHHHHhCCCcEe
Confidence            36667889999998876  67789999999999999999999875

Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles.

>TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase

Probab=98.60  E-value=1e-07  Score=94.76  Aligned_cols=110  Identities=14%  Similarity=0.224  Sum_probs=84.9

Q ss_pred             CCCChhHHHHHHhCC---C-cEEEEeCCChHHHHHHHHHhCCCCccceeEeecCCCCCCCCCCCCChhhHHHHHhhhccc
Q 022360           98 LKPDPVLRSLLLSLP---L-RKIIFTNADKVHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSDDEDDIAFVESAASTT  173 (298)
Q Consensus        98 ~~~~~g~~~~L~~l~---~-~~~ivS~~~~~~~~~~l~~l~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  173 (298)
                      -.++||+.+.|+.|+   + +++++|+.....++..++++|++++|..+.                              
T Consensus       361 d~l~~~~~e~i~~L~~~Gi~~v~vvTgd~~~~a~~i~~~lgi~~~f~~~~------------------------------  410 (536)
T TIGR01512       361 DEPRPDAAEAIAELKALGIEKVVMLTGDRRAVAERVARELGIDEVHAELL------------------------------  410 (536)
T ss_pred             ccchHHHHHHHHHHHHcCCCcEEEEcCCCHHHHHHHHHHcCChhhhhccC------------------------------
Confidence            467899999988884   7 899999999999999999999987764332                              


Q ss_pred             CCCCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHHcCCeEEEecCC-
Q 022360          174 TSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTVLIGKS-  252 (298)
Q Consensus       174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a~~aG~~~v~v~~~-  252 (298)
                                                     +.+|..    ++++++..+++++||||+.||+.+++.+|+...+...+ 
T Consensus       411 -------------------------------p~~K~~----~i~~l~~~~~~v~~vGDg~nD~~al~~A~vgia~g~~~~  455 (536)
T TIGR01512       411 -------------------------------PEDKLE----IVKELREKYGPVAMVGDGINDAPALAAADVGIAMGASGS  455 (536)
T ss_pred             -------------------------------cHHHHH----HHHHHHhcCCEEEEEeCCHHHHHHHHhCCEEEEeCCCcc
Confidence                                           233444    44444555689999999999999999999866654222 


Q ss_pred             -CCCCCCCEEe--CCHHHHHHHh
Q 022360          253 -QRVKGADYAF--ESIHNIKEAI  272 (298)
Q Consensus       253 -~~~~~ad~i~--~s~~~l~~~l  272 (298)
                       ..+..+|.++  +++.+|.+.+
T Consensus       456 ~~~~~~ad~vl~~~~l~~l~~~i  478 (536)
T TIGR01512       456 DVAIETADVVLLNDDLSRLPQAI  478 (536)
T ss_pred             HHHHHhCCEEEECCCHHHHHHHH
Confidence             2367899999  8899887654

.

>TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase

Probab=98.55  E-value=1.7e-07  Score=93.50  Aligned_cols=110  Identities=13%  Similarity=0.221  Sum_probs=83.2

Q ss_pred             CCCChhHHHHHHhC---C-CcEEEEeCCChHHHHHHHHHhCCCCccceeEeecCCCCCCCCCCCCChhhHHHHHhhhccc
Q 022360           98 LKPDPVLRSLLLSL---P-LRKIIFTNADKVHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSDDEDDIAFVESAASTT  173 (298)
Q Consensus        98 ~~~~~g~~~~L~~l---~-~~~~ivS~~~~~~~~~~l~~l~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  173 (298)
                      ..++||+.++|++|   + ++++++|+.....++..++++|++++|..+.                              
T Consensus       383 d~~~~g~~e~l~~L~~~g~i~v~ivTgd~~~~a~~i~~~lgi~~~f~~~~------------------------------  432 (556)
T TIGR01525       383 DQLRPEAKEAIAALKRAGGIKLVMLTGDNRSAAEAVAAELGIDEVHAELL------------------------------  432 (556)
T ss_pred             ccchHhHHHHHHHHHHcCCCeEEEEeCCCHHHHHHHHHHhCCCeeeccCC------------------------------
Confidence            46789999999988   4 6889999999999999999999987775431                              


Q ss_pred             CCCCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHHcCCeEEEecCCC
Q 022360          174 TSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTVLIGKSQ  253 (298)
Q Consensus       174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a~~aG~~~v~v~~~~  253 (298)
                                                     +++|+..++.+    +..+.+|+||||+.||+.+++++|+...+.....
T Consensus       433 -------------------------------p~~K~~~v~~l----~~~~~~v~~vGDg~nD~~al~~A~vgia~g~~~~  477 (556)
T TIGR01525       433 -------------------------------PEDKLAIVKEL----QEEGGVVAMVGDGINDAPALAAADVGIAMGAGSD  477 (556)
T ss_pred             -------------------------------HHHHHHHHHHH----HHcCCEEEEEECChhHHHHHhhCCEeEEeCCCCH
Confidence                                           23344444444    4466799999999999999999997666552111


Q ss_pred             -CCCCCCEEeC--CHHHHHHHh
Q 022360          254 -RVKGADYAFE--SIHNIKEAI  272 (298)
Q Consensus       254 -~~~~ad~i~~--s~~~l~~~l  272 (298)
                       .+..+|+++.  ++..|.+.+
T Consensus       478 ~~~~~Ad~vi~~~~~~~l~~~i  499 (556)
T TIGR01525       478 VAIEAADIVLLNDDLSSLPTAI  499 (556)
T ss_pred             HHHHhCCEEEeCCCHHHHHHHH
Confidence             3567999998  566666554

This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512.

>TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase

Probab=98.48  E-value=3.9e-07  Score=91.06  Aligned_cols=109  Identities=14%  Similarity=0.227  Sum_probs=81.1

Q ss_pred             CCCChhHHHHHHhCC---CcEEEEeCCChHHHHHHHHHhCCCCccceeEeecCCCCCCCCCCCCChhhHHHHHhhhcccC
Q 022360           98 LKPDPVLRSLLLSLP---LRKIIFTNADKVHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSDDEDDIAFVESAASTTT  174 (298)
Q Consensus        98 ~~~~~g~~~~L~~l~---~~~~ivS~~~~~~~~~~l~~l~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  174 (298)
                      ..++|++.++|++|+   ++++++|+.....++..++++|++ +|.     + ..                         
T Consensus       404 d~l~~~a~e~i~~Lk~~Gi~v~ilSgd~~~~a~~ia~~lgi~-~~~-----~-~~-------------------------  451 (562)
T TIGR01511       404 DQLRPEAKEVIQALKRRGIEPVMLTGDNRKTAKAVAKELGIN-VRA-----E-VL-------------------------  451 (562)
T ss_pred             ccccHHHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHcCCc-EEc-----c-CC-------------------------
Confidence            457899999888874   789999999999999999999995 221     1 00                         


Q ss_pred             CCCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHHcCCeEEEecCC-C
Q 022360          175 SANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTVLIGKS-Q  253 (298)
Q Consensus       175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a~~aG~~~v~v~~~-~  253 (298)
                                                    +++|.+.++++.+    ++++|+||||+.||+.+++.+|+...+.... .
T Consensus       452 ------------------------------p~~K~~~v~~l~~----~~~~v~~VGDg~nD~~al~~A~vgia~g~g~~~  497 (562)
T TIGR01511       452 ------------------------------PDDKAALIKELQE----KGRVVAMVGDGINDAPALAQADVGIAIGAGTDV  497 (562)
T ss_pred             ------------------------------hHHHHHHHHHHHH----cCCEEEEEeCCCccHHHHhhCCEEEEeCCcCHH
Confidence                                          2445555555443    6789999999999999999999876655322 2


Q ss_pred             CCCCCCEEeC--CHHHHHHHh
Q 022360          254 RVKGADYAFE--SIHNIKEAI  272 (298)
Q Consensus       254 ~~~~ad~i~~--s~~~l~~~l  272 (298)
                      .+..+|+++.  ++.+|.+.+
T Consensus       498 a~~~Advvl~~~~l~~l~~~i  518 (562)
T TIGR01511       498 AIEAADVVLMRNDLNDVATAI  518 (562)
T ss_pred             HHhhCCEEEeCCCHHHHHHHH
Confidence            3677999994  777776654

One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification.

>PLN02423 phosphomannomutase

Probab=98.36  E-value=2.7e-06  Score=76.17  Aligned_cols=54  Identities=11%  Similarity=0.030  Sum_probs=46.0

Q ss_pred             CCCCHHHHHHHHHHcCCCCCcEEEEcC----CccchHHHHHcCCeEEEecCCCCCCCCCEEeCCHHHHHHHhHHhh
Q 022360          205 CKPSELAIEKALKIASINPQRTLFFED----SVRNIQAGKRVGLDTVLIGKSQRVKGADYAFESIHNIKEAIPELW  276 (298)
Q Consensus       205 ~kp~~~~~~~~l~~l~i~p~~~i~iGD----s~~Di~~a~~aG~~~v~v~~~~~~~~ad~i~~s~~~l~~~l~~~~  276 (298)
                      +-.|..+++.++     +++++++|||    +.||++|.+.-|+.++             .+.+.+|..+.|.+++
T Consensus       187 gvnKg~al~~L~-----~~~e~~aFGD~~~~~~ND~eMl~~~~~~~~-------------~~~~~~~~~~~~~~~~  244 (245)
T PLN02423        187 GWDKTYCLQFLE-----DFDEIHFFGDKTYEGGNDHEIFESERTIGH-------------TVTSPDDTREQCTALF  244 (245)
T ss_pred             CCCHHHHHHHhc-----CcCeEEEEeccCCCCCCcHHHHhCCCcceE-------------EeCCHHHHHHHHHHhc
Confidence            477778888888     8999999999    6999999999898888             6778888888887764

>PTZ00174 phosphomannomutase; Provisional

Probab=98.35  E-value=5.2e-07  Score=80.82  Aligned_cols=42  Identities=7%  Similarity=-0.078  Sum_probs=36.1

Q ss_pred             CCCCHHHHHHHHHHcCCCCCcEEEEcC----CccchHHHHHcCCeEEEec
Q 022360          205 CKPSELAIEKALKIASINPQRTLFFED----SVRNIQAGKRVGLDTVLIG  250 (298)
Q Consensus       205 ~kp~~~~~~~~l~~l~i~p~~~i~iGD----s~~Di~~a~~aG~~~v~v~  250 (298)
                      +-.|..+++.++++    ++++++|||    +.||++|.+.++...+.++
T Consensus       186 gvsKg~al~~L~~~----~~eviafGD~~~~~~NDieMl~~~~~~g~~v~  231 (247)
T PTZ00174        186 GWDKTYCLRHLEND----FKEIHFFGDKTFEGGNDYEIYNDPRTIGHSVK  231 (247)
T ss_pred             CCcHHHHHHHHHhh----hhhEEEEcccCCCCCCcHhhhhcCCCceEEeC
Confidence            47788999999998    589999999    8999999998877666554

>TIGR02251 HIF-SF_euk Dullard-like phosphatase domain

Probab=98.28  E-value=3.8e-07  Score=76.59  Aligned_cols=95  Identities=14%  Similarity=0.093  Sum_probs=79.6

Q ss_pred             CCCChhHHHHHHhCC--CcEEEEeCCChHHHHHHHHHhCCCC-ccceeEeecCCCCCCCCCCCCChhhHHHHHhhhcccC
Q 022360           98 LKPDPVLRSLLLSLP--LRKIIFTNADKVHAVKVLSRLGLED-CFEGIICFETLNPTHKNTVSDDEDDIAFVESAASTTT  174 (298)
Q Consensus        98 ~~~~~g~~~~L~~l~--~~~~ivS~~~~~~~~~~l~~l~l~~-~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  174 (298)
                      +...||+.++|+.+.  +.++|.|++...+++.++++++... +|+.++..++...                        
T Consensus        41 v~~RPgl~eFL~~l~~~yei~I~Ts~~~~yA~~il~~ldp~~~~f~~~l~r~~~~~------------------------   96 (162)
T TIGR02251        41 VFKRPHVDEFLERVSKWYELVIFTASLEEYADPVLDILDRGGKVISRRLYRESCVF------------------------   96 (162)
T ss_pred             EEECCCHHHHHHHHHhcCEEEEEcCCcHHHHHHHHHHHCcCCCEEeEEEEccccEE------------------------
Confidence            567899999999986  6799999999999999999999876 8888888765432                        


Q ss_pred             CCCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHHcCCeEEEe
Q 022360          175 SANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTVLI  249 (298)
Q Consensus       175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a~~aG~~~v~v  249 (298)
                                                    .+|+   +.+.++.+|.++++|++|||+..|+.++.++|+.+...
T Consensus        97 ------------------------------~~~~---~~K~L~~l~~~~~~vIiVDD~~~~~~~~~~NgI~i~~f  138 (162)
T TIGR02251        97 ------------------------------TNGK---YVKDLSLVGKDLSKVIIIDNSPYSYSLQPDNAIPIKSW  138 (162)
T ss_pred             ------------------------------eCCC---EEeEchhcCCChhhEEEEeCChhhhccCccCEeecCCC
Confidence                                          2343   56778889999999999999999999999999876543

This domain is related to domains found in FCP1-like phosphatases (TIGR02250), and together both are detected by the Pfam model pfam03031.

>TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase

Probab=98.27  E-value=3.5e-06  Score=88.44  Aligned_cols=137  Identities=20%  Similarity=0.236  Sum_probs=99.0

Q ss_pred             CCChhHHHHHHhC---CCcEEEEeCCChHHHHHHHHHhCCCCccceeEeecCCCCCCCCCCCCChhhHHHHHhhhcccCC
Q 022360           99 KPDPVLRSLLLSL---PLRKIIFTNADKVHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSDDEDDIAFVESAASTTTS  175 (298)
Q Consensus        99 ~~~~g~~~~L~~l---~~~~~ivS~~~~~~~~~~l~~l~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  175 (298)
                      ++.|++.+.++.|   ++++.++|+.....+..+.+.+|+...++.++++.++..+      ++ +.++.+..       
T Consensus       528 p~r~~~~~~i~~l~~~Gi~v~miTGD~~~tA~~ia~~~Gi~~~~~~~v~g~~l~~~------~~-~~l~~~~~-------  593 (884)
T TIGR01522       528 PPRPGVKEAVTTLITGGVRIIMITGDSQETAVSIARRLGMPSKTSQSVSGEKLDAM------DD-QQLSQIVP-------  593 (884)
T ss_pred             cchhHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCCCceeEhHHhHhC------CH-HHHHHHhh-------
Confidence            5688999888877   4889999999999999999999998877777766554321      11 11111100       


Q ss_pred             CCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHHcCCeEEEecCCC--
Q 022360          176 ANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTVLIGKSQ--  253 (298)
Q Consensus       176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a~~aG~~~v~v~~~~--  253 (298)
                        ...+                      .+...|+-...+++.++-..+.+.|+||+.||+.+.+.|+++.++...+.  
T Consensus       594 --~~~V----------------------far~~P~~K~~iv~~lq~~g~~v~mvGDGvND~pAl~~AdVGia~g~~g~~v  649 (884)
T TIGR01522       594 --KVAV----------------------FARASPEHKMKIVKALQKRGDVVAMTGDGVNDAPALKLADIGVAMGQTGTDV  649 (884)
T ss_pred             --cCeE----------------------EEECCHHHHHHHHHHHHHCCCEEEEECCCcccHHHHHhCCeeEecCCCcCHH
Confidence              0011                      15666777777778777777889999999999999999998877642222  


Q ss_pred             CCCCCCEEe--CCHHHHHHHhH
Q 022360          254 RVKGADYAF--ESIHNIKEAIP  273 (298)
Q Consensus       254 ~~~~ad~i~--~s~~~l~~~l~  273 (298)
                      .+..+|+++  +++..+.++++
T Consensus       650 a~~aaDivl~dd~~~~i~~~i~  671 (884)
T TIGR01522       650 AKEAADMILTDDDFATILSAIE  671 (884)
T ss_pred             HHHhcCEEEcCCCHHHHHHHHH
Confidence            367899999  55888776554

The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116.

>PF08645 PNK3P: Polynucleotide kinase 3 phosphatase; InterPro: IPR013954 Polynucleotide kinase 3 phosphatases play a role in the repair of single breaks in DNA induced by DNA-damaging agents such as gamma radiation and camptothecin []

Probab=98.24  E-value=1.7e-06  Score=72.43  Aligned_cols=43  Identities=19%  Similarity=0.142  Sum_probs=34.6

Q ss_pred             CCCCHHHHHHHHHHcCC----CCCcEEEEcCC-----------ccchHHHHHcCCeEE
Q 022360          205 CKPSELAIEKALKIASI----NPQRTLFFEDS-----------VRNIQAGKRVGLDTV  247 (298)
Q Consensus       205 ~kp~~~~~~~~l~~l~i----~p~~~i~iGDs-----------~~Di~~a~~aG~~~v  247 (298)
                      +||++-++..+++.++.    +.++++||||.           ..|.+-|.++|+...
T Consensus        96 RKP~~GM~~~~~~~~~~~~~id~~~Sf~VGDaagr~~~~~d~s~~D~~fA~N~gi~f~  153 (159)
T PF08645_consen   96 RKPNPGMWEFALKDYNDGVEIDLANSFYVGDAAGRSKKKKDFSDSDRKFALNCGIKFY  153 (159)
T ss_dssp             STTSSHHHHHHCCCTSTT--S-CCC-EEEESSCHCTB-S--S--HHHHHHHHHT--EE
T ss_pred             CCCchhHHHHHHHhccccccccccceEEEeccCCCCCcccccChhHHHHHHHcCCccc
Confidence            89999999999999874    89999999996           578999999999754

; PDB: 2FPW_A 2FPR_A 2FPX_A 2FPS_A 2FPU_B 3ZVM_A 1YJ5_A 3ZVL_A 3U7E_B 3U7G_A ....

>PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed

Probab=98.22  E-value=1.9e-06  Score=78.47  Aligned_cols=43  Identities=21%  Similarity=0.157  Sum_probs=36.4

Q ss_pred             CCCHHHHHHHHHHcCCC--CCcEEEEcCCccchHHHHHcCCeEEE
Q 022360          206 KPSELAIEKALKIASIN--PQRTLFFEDSVRNIQAGKRVGLDTVL  248 (298)
Q Consensus       206 kp~~~~~~~~l~~l~i~--p~~~i~iGDs~~Di~~a~~aG~~~v~  248 (298)
                      -+|..+.+.+.+.+.-.  +-.++.+|||.||+.|.+.+-+.++.
T Consensus       207 ~dKg~A~~~L~~~y~~~~~~~~tiaLGDspND~~mLe~~D~~vvi  251 (302)
T PRK12702        207 LPGEQAVQLLLDCYQRHLGPIKALGIGCSPPDLAFLRWSEQKVVL  251 (302)
T ss_pred             CCHHHHHHHHHHHHHhccCCceEEEecCChhhHHHHHhCCeeEEe
Confidence            46778888888877754  55899999999999999999988775

>TIGR01684 viral_ppase viral phosphatase

Probab=98.21  E-value=4.2e-06  Score=76.07  Aligned_cols=49  Identities=20%  Similarity=0.305  Sum_probs=41.8

Q ss_pred             hhHHHHHHhC---CCcEEEEeCCChHHHHHHHHHhCCCCccceeEeecCCCC
Q 022360          102 PVLRSLLLSL---PLRKIIFTNADKVHAVKVLSRLGLEDCFEGIICFETLNP  150 (298)
Q Consensus       102 ~g~~~~L~~l---~~~~~ivS~~~~~~~~~~l~~l~l~~~f~~i~~~~~~~~  150 (298)
                      ||+.++|+.|   +.+++|+|++....+...++++|+..+|+.++++++...
T Consensus       149 PgV~EaL~~LkekGikLaIaTS~~Re~v~~~L~~lGLd~YFdvIIs~Gdv~~  200 (301)
T TIGR01684       149 PRIYDSLTELKKRGCILVLWSYGDRDHVVESMRKVKLDRYFDIIISGGHKAE  200 (301)
T ss_pred             HHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHcCCCcccCEEEECCcccc
Confidence            6666666666   577899999999999999999999999999999887754

These proteins also include an N-terminal domain (ca. 125 aas) that is unique to this clade.

>TIGR00685 T6PP trehalose-phosphatase

Probab=98.20  E-value=4.9e-06  Score=74.36  Aligned_cols=71  Identities=15%  Similarity=0.167  Sum_probs=63.0

Q ss_pred             CCCHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHHc-------CCeEEEecCCCCCCCCCEEeCCHHHHHHHhHHhh
Q 022360          206 KPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRV-------GLDTVLIGKSQRVKGADYAFESIHNIKEAIPELW  276 (298)
Q Consensus       206 kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a~~a-------G~~~v~v~~~~~~~~ad~i~~s~~~l~~~l~~~~  276 (298)
                      -.|..+++.+++++++++.++++|||+.||+.|++.+       |..++.+..+..+..|++++++..++.++|..+.
T Consensus       166 ~~Kg~a~~~~~~~~~~~~~~~i~iGD~~~D~~~~~~~~~~~~~~g~~~v~v~~g~~~~~A~~~~~~~~~v~~~L~~l~  243 (244)
T TIGR00685       166 VNKGEIVKRLLWHQPGSGISPVYLGDDITDEDAFRVVNNQWGNYGFYPVPIGSGSKKTVAKFHLTGPQQVLEFLGLLV  243 (244)
T ss_pred             CCHHHHHHHHHHhcccCCCceEEEcCCCcHHHHHHHHhcccCCCCeEEEEEecCCcCCCceEeCCCHHHHHHHHHHHh
Confidence            5567999999999999999999999999999999999       6667777667778889999999999999998765

At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes.

>PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria []

Probab=98.19  E-value=4.2e-06  Score=75.06  Aligned_cols=47  Identities=19%  Similarity=0.236  Sum_probs=37.5

Q ss_pred             CCCCHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHHcCCeEEEecCC
Q 022360          205 CKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTVLIGKS  252 (298)
Q Consensus       205 ~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a~~aG~~~v~v~~~  252 (298)
                      +-.|..+++++++++++++++++++|||.||+.|. ..+...+.|+..
T Consensus       163 ~a~K~~Al~~L~~~~~~~~~~vl~aGDSgND~~mL-~~~~~~vvV~Na  209 (247)
T PF05116_consen  163 GASKGAALRYLMERWGIPPEQVLVAGDSGNDLEML-EGGDHGVVVGNA  209 (247)
T ss_dssp             T-SHHHHHHHHHHHHT--GGGEEEEESSGGGHHHH-CCSSEEEE-TTS
T ss_pred             CCCHHHHHHHHHHHhCCCHHHEEEEeCCCCcHHHH-cCcCCEEEEcCC
Confidence            57788999999999999999999999999999999 666677766554

SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B ....

>COG4087 Soluble P-type ATPase [General function prediction only]

Probab=98.18  E-value=1.3e-05  Score=63.95  Aligned_cols=116  Identities=14%  Similarity=0.141  Sum_probs=90.6

Q ss_pred             CCCCChhHHHHHHhCC--CcEEEEeCCChHHHHHHHHHhCCCCccceeEeecCCCCCCCCCCCCChhhHHHHHhhhcccC
Q 022360           97 NLKPDPVLRSLLLSLP--LRKIIFTNADKVHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSDDEDDIAFVESAASTTT  174 (298)
Q Consensus        97 ~~~~~~g~~~~L~~l~--~~~~ivS~~~~~~~~~~l~~l~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  174 (298)
                      .-++++.+.+.+..|.  .+++|.|+.....+...++..|+.  .+.++.                              
T Consensus        28 gGklf~ev~e~iqeL~d~V~i~IASgDr~gsl~~lae~~gi~--~~rv~a------------------------------   75 (152)
T COG4087          28 GGKLFSEVSETIQELHDMVDIYIASGDRKGSLVQLAEFVGIP--VERVFA------------------------------   75 (152)
T ss_pred             CcEEcHhhHHHHHHHHHhheEEEecCCcchHHHHHHHHcCCc--eeeeec------------------------------
Confidence            4466777777777765  789999999999999999988865  223332                              


Q ss_pred             CCCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHHcCCeEEEecCCCC
Q 022360          175 SANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTVLIGKSQR  254 (298)
Q Consensus       175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a~~aG~~~v~v~~~~~  254 (298)
                                                     -.++..-..+++.++-..+.|+||||+.||+.+.+++-++.+-+.....
T Consensus        76 -------------------------------~a~~e~K~~ii~eLkk~~~k~vmVGnGaND~laLr~ADlGI~tiq~e~v  124 (152)
T COG4087          76 -------------------------------GADPEMKAKIIRELKKRYEKVVMVGNGANDILALREADLGICTIQQEGV  124 (152)
T ss_pred             -------------------------------ccCHHHHHHHHHHhcCCCcEEEEecCCcchHHHhhhcccceEEeccCCc
Confidence                                           3345778888888888888999999999999999999888777754332


Q ss_pred             ----CCCCCEEeCCHHHHHHHhHHh
Q 022360          255 ----VKGADYAFESIHNIKEAIPEL  275 (298)
Q Consensus       255 ----~~~ad~i~~s~~~l~~~l~~~  275 (298)
                          ...||+++.++.++.+++...
T Consensus       125 ~~r~l~~ADvvik~i~e~ldl~~~~  149 (152)
T COG4087         125 PERLLLTADVVLKEIAEILDLLKDT  149 (152)
T ss_pred             chHHHhhchhhhhhHHHHHHHhhcc
Confidence                477999999999988877543

>COG4996 Predicted phosphatase [General function prediction only]

Probab=98.15  E-value=4e-06  Score=66.85  Aligned_cols=48  Identities=21%  Similarity=0.135  Sum_probs=39.0

Q ss_pred             CCCCChhHHHHHHhCCCcEEEEeC---CChHHHHHHHHHhCCCCccceeEe
Q 022360           97 NLKPDPVLRSLLLSLPLRKIIFTN---ADKVHAVKVLSRLGLEDCFEGIIC  144 (298)
Q Consensus        97 ~~~~~~g~~~~L~~l~~~~~ivS~---~~~~~~~~~l~~l~l~~~f~~i~~  144 (298)
                      .+.++|.+.++|.+++-.++|+|.   .....+-..++.++++.||+.++.
T Consensus        39 ev~L~~~v~~~l~warnsG~i~~~~sWN~~~kA~~aLral~~~~yFhy~Vi   89 (164)
T COG4996          39 EVHLFPDVKETLKWARNSGYILGLASWNFEDKAIKALRALDLLQYFHYIVI   89 (164)
T ss_pred             EEEEcHHHHHHHHHHHhCCcEEEEeecCchHHHHHHHHHhchhhhEEEEEe
Confidence            367899999999999866655544   667777788999999999998874

>PRK10671 copA copper exporting ATPase; Provisional

Probab=98.12  E-value=9.3e-06  Score=84.83  Aligned_cols=110  Identities=15%  Similarity=0.236  Sum_probs=82.0

Q ss_pred             CCChhHHHHHHhC---CCcEEEEeCCChHHHHHHHHHhCCCCccceeEeecCCCCCCCCCCCCChhhHHHHHhhhcccCC
Q 022360           99 KPDPVLRSLLLSL---PLRKIIFTNADKVHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSDDEDDIAFVESAASTTTS  175 (298)
Q Consensus        99 ~~~~g~~~~L~~l---~~~~~ivS~~~~~~~~~~l~~l~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  175 (298)
                      .++|++.+.|+.|   +++++++|+......+.+.+++|+.++|..+.                                
T Consensus       650 ~~r~~a~~~i~~L~~~gi~v~~~Tgd~~~~a~~ia~~lgi~~~~~~~~--------------------------------  697 (834)
T PRK10671        650 PLRSDSVAALQRLHKAGYRLVMLTGDNPTTANAIAKEAGIDEVIAGVL--------------------------------  697 (834)
T ss_pred             cchhhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCCEEEeCCC--------------------------------
Confidence            5678899888877   47899999999999999999999976553221                                


Q ss_pred             CCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHHcCCeEEEecCCC-C
Q 022360          176 ANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTVLIGKSQ-R  254 (298)
Q Consensus       176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a~~aG~~~v~v~~~~-~  254 (298)
                                                   +.+    ...++++++..+++++||||+.||+.+++.+|++.++.+... .
T Consensus       698 -----------------------------p~~----K~~~i~~l~~~~~~v~~vGDg~nD~~al~~Agvgia~g~g~~~a  744 (834)
T PRK10671        698 -----------------------------PDG----KAEAIKRLQSQGRQVAMVGDGINDAPALAQADVGIAMGGGSDVA  744 (834)
T ss_pred             -----------------------------HHH----HHHHHHHHhhcCCEEEEEeCCHHHHHHHHhCCeeEEecCCCHHH
Confidence                                         122    334556666678899999999999999999999777664322 3


Q ss_pred             CCCCCEEe--CCHHHHHHHhH
Q 022360          255 VKGADYAF--ESIHNIKEAIP  273 (298)
Q Consensus       255 ~~~ad~i~--~s~~~l~~~l~  273 (298)
                      +..+|.++  +++++|.++++
T Consensus       745 ~~~ad~vl~~~~~~~i~~~i~  765 (834)
T PRK10671        745 IETAAITLMRHSLMGVADALA  765 (834)
T ss_pred             HHhCCEEEecCCHHHHHHHHH
Confidence            55566554  66777776664

>PF06941 NT5C: 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C); InterPro: IPR010708 This family consists of several 5' nucleotidase, deoxy (Pyrimidine), and cytosolic type C (NT5C) proteins

Probab=98.08  E-value=2.5e-05  Score=67.20  Aligned_cols=46  Identities=13%  Similarity=0.237  Sum_probs=35.2

Q ss_pred             EEEcCCccchHHHHHcCCeEEEecCCCCCCC-CCEEeCCHHHHHHHh
Q 022360          227 LFFEDSVRNIQAGKRVGLDTVLIGKSQRVKG-ADYAFESIHNIKEAI  272 (298)
Q Consensus       227 i~iGDs~~Di~~a~~aG~~~v~v~~~~~~~~-ad~i~~s~~~l~~~l  272 (298)
                      ++|.|+...+..+...|+.+++...+..+.. .-..+.|.+|+.+.|
T Consensus       139 vlIDD~~~n~~~~~~~g~~~iLfd~p~Nr~~~~~~Rv~~W~ei~~~i  185 (191)
T PF06941_consen  139 VLIDDRPHNLEQFANAGIPVILFDQPYNRDESNFPRVNNWEEIEDLI  185 (191)
T ss_dssp             EEEESSSHHHSS-SSESSEEEEE--GGGTT--TSEEE-STTSHHHHH
T ss_pred             EEecCChHHHHhccCCCceEEEEcCCCCCCCCCCccCCCHHHHHHHH
Confidence            7999999999999999999999977765443 477889999988776

5'(3')-deoxyribonucleotidase is a ubiquitous enzyme in mammalian cells whose physiological function is not known [].; GO: 0016791 phosphatase activity; PDB: 1Z4M_A 1Q92_A 1Q91_A 1Z4J_A 1Z4I_A 1Z4Q_A 1Z4K_A 2JAW_A 1MH9_A 1Z4L_A ....

>PF05761 5_nucleotid: 5' nucleotidase family; InterPro: IPR008380 This family includes a 5'-nucleotidase, 3

Probab=98.06  E-value=2.5e-05  Score=75.59  Aligned_cols=129  Identities=20%  Similarity=0.196  Sum_probs=69.5

Q ss_pred             CCCChhHHHHHHhCC---CcEEEEeCCChHHHHHHHHHh---------CCCCccceeEeecCCCCCCCCCCCCChhhHHH
Q 022360           98 LKPDPVLRSLLLSLP---LRKIIFTNADKVHAVKVLSRL---------GLEDCFEGIICFETLNPTHKNTVSDDEDDIAF  165 (298)
Q Consensus        98 ~~~~~g~~~~L~~l~---~~~~ivS~~~~~~~~~~l~~l---------~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~  165 (298)
                      +...|.+..+|++++   .++.++||+.-.++...++.+         .+.++||.|++...-..              |
T Consensus       182 i~k~~~l~~~L~~lr~~GKklFLiTNS~~~yt~~~M~yl~g~~~~~~~dW~dlFDvVIv~A~KP~--------------F  247 (448)
T PF05761_consen  182 IHKDPKLPPWLERLRSAGKKLFLITNSPFDYTNAVMSYLLGPFLGEDPDWRDLFDVVIVDARKPG--------------F  247 (448)
T ss_dssp             EE--CHHHHHHHHHHCCT-EEEEE-SS-HHHHHHHHHHHCGCCSSTTT-GGGCECEEEES--CCH--------------H
T ss_pred             ccCCchHHHHHHHHHhcCceEEEecCCCCchhhhhhhhccCCCCCCCCChhhheeEEEEcCCCCc--------------c
Confidence            445688888888774   679999999999999999876         35679999987643211              0


Q ss_pred             HHhhhcccCCCCCCchhhhcc-cc-CCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCc-cchHHHHHc
Q 022360          166 VESAASTTTSANGPQIFDIIG-HF-AQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSV-RNIQAGKRV  242 (298)
Q Consensus       166 ~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~p~~~i~iGDs~-~Di~~a~~a  242 (298)
                      ..      .   ...+..+.. +. +......-.+.+|....-   -....+.+.+|+...+++||||+. .||...+..
T Consensus       248 F~------~---~~pfr~vd~~~g~l~~~~~~~~l~~g~vY~g---Gn~~~l~~ll~~~g~~VLY~GDhi~~Di~~~k~~  315 (448)
T PF05761_consen  248 FT------E---GRPFREVDTETGKLKWGKYVGPLEKGKVYSG---GNWDQLHKLLGWRGKEVLYFGDHIYGDILKSKKR  315 (448)
T ss_dssp             HC------T------EEEEETTTSSEECS---SS--TC-EEEE-----HHHHHHHCT--GGGEEEEESSTTTTHHHHHHH
T ss_pred             cC------C---CCceEEEECCCCccccccccccccCCCEeec---CCHHHHHHHHccCCCeEEEECCchhhhhhhhccc
Confidence            00      0   001111110 00 000000000111111111   345666777899999999999999 999888777


Q ss_pred             -CCeEEEecCC
Q 022360          243 -GLDTVLIGKS  252 (298)
Q Consensus       243 -G~~~v~v~~~  252 (298)
                       ||.+++|-..
T Consensus       316 ~gWrT~~Ii~E  326 (448)
T PF05761_consen  316 HGWRTAAIIPE  326 (448)
T ss_dssp             H-SEEEEE-TT
T ss_pred             cceEEEEEehh
Confidence             9999988554

1.3.5 from EC, specific for purines (IMP and GMP) []. These enzymes are members of the Haloacid Dehalogenase (HAD) superfamily. HAD members are recognised by three short motifs {hhhhDxDx(T/V)}, {hhhh(T/S)}, and either {hhhh(D/E)(D/E)x(3-4)(G/N)} or {hhhh(G/N)(D/E)x(3-4)(D/E)} (where "h" stands for a hydrophobic residue). Crystal structures of many HAD enzymes has verified PSI-PRED predictions of secondary structural elements which show each of the "hhhh" sequences of the motifs as part of beta sheets. This subfamily of enzymes is part of "Subfamily I" of the HAD superfamily by virtue of a "cap" domain in between motifs 1 and 2. This subfamily's cap domain has a different predicted secondary structure than all other known HAD enzymes and thus has been designated "subfamily IG", the domain appears to consist of a mixed alpha/beta fold.; PDB: 2BDE_A 2XCW_A 2XCX_A 2XCV_A 2XJB_A 2JCM_A 2XJE_A 2J2C_A 2XJF_A 2XJD_A ....

>PLN02177 glycerol-3-phosphate acyltransferase

Probab=98.03  E-value=0.00014  Score=71.48  Aligned_cols=102  Identities=12%  Similarity=0.062  Sum_probs=60.4

Q ss_pred             CChhHHHHHHhCCCcEEEEeCCChHHHHHHHHH-hCCCCccceeEeecCCCCCCCCCCCCChhhHHHHHhhhcccCCCCC
Q 022360          100 PDPVLRSLLLSLPLRKIIFTNADKVHAVKVLSR-LGLEDCFEGIICFETLNPTHKNTVSDDEDDIAFVESAASTTTSANG  178 (298)
Q Consensus       100 ~~~g~~~~L~~l~~~~~ivS~~~~~~~~~~l~~-l~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  178 (298)
                      ..|...+.++..+. .+|+|.+...+++..++. +|++..+..-+.....|.+                           
T Consensus       111 l~~~a~~~~~~~g~-~vvVSASp~~~Vepfa~~~LGid~VIgTeLev~~~G~~---------------------------  162 (497)
T PLN02177        111 VHPETWRVFNSFGK-RYIITASPRIMVEPFVKTFLGADKVLGTELEVSKSGRA---------------------------  162 (497)
T ss_pred             cCHHHHHHHHhCCC-EEEEECCcHHHHHHHHHHcCCCCEEEecccEECcCCEE---------------------------
Confidence            55667777777664 499999999999999975 7876432111111112221                           


Q ss_pred             CchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHHcCCeEEE
Q 022360          179 PQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTVL  248 (298)
Q Consensus       179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a~~aG~~~v~  248 (298)
                            +|.+.++|.-         .+..|...++   +.++.+... ++.|||.+|..+...++-..+.
T Consensus       163 ------TG~i~g~~~c---------~Ge~Kv~rl~---~~~g~~~~~-~aYgDS~sD~plL~~a~e~y~V  213 (497)
T PLN02177        163 ------TGFMKKPGVL---------VGDHKRDAVL---KEFGDALPD-LGLGDRETDHDFMSICKEGYMV  213 (497)
T ss_pred             ------eeeecCCCCC---------ccHHHHHHHH---HHhCCCCce-EEEECCccHHHHHHhCCccEEe
Confidence                  1111111110         0233334443   555644334 8999999999999999966553

>PHA03398 viral phosphatase superfamily protein; Provisional

Probab=97.96  E-value=4.9e-05  Score=69.32  Aligned_cols=48  Identities=25%  Similarity=0.353  Sum_probs=39.6

Q ss_pred             hhHHHHHHhC---CCcEEEEeCCChHHHHHHHHHhCCCCccceeEeecCCC
Q 022360          102 PVLRSLLLSL---PLRKIIFTNADKVHAVKVLSRLGLEDCFEGIICFETLN  149 (298)
Q Consensus       102 ~g~~~~L~~l---~~~~~ivS~~~~~~~~~~l~~l~l~~~f~~i~~~~~~~  149 (298)
                      |++.++|++|   +.+++|+|++....+...++.+++..+|+.++++++..
T Consensus       151 p~V~EtL~eLkekGikLaIvTNg~Re~v~~~Le~lgL~~yFDvII~~g~i~  201 (303)
T PHA03398        151 PFVYDSLDELKERGCVLVLWSYGNREHVVHSLKETKLEGYFDIIICGGRKA  201 (303)
T ss_pred             hhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHcCCCccccEEEECCCcc
Confidence            5555555555   57899999999999999999999999999999887654

>TIGR01116 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium-translocating P-type ATPase

Probab=97.83  E-value=6.7e-05  Score=79.22  Aligned_cols=136  Identities=13%  Similarity=0.128  Sum_probs=89.3

Q ss_pred             CCChhHHHHHHhC---CCcEEEEeCCChHHHHHHHHHhCCCCc----cceeEeecCCCCCCCCCCCCChhhHHHHHhhhc
Q 022360           99 KPDPVLRSLLLSL---PLRKIIFTNADKVHAVKVLSRLGLEDC----FEGIICFETLNPTHKNTVSDDEDDIAFVESAAS  171 (298)
Q Consensus        99 ~~~~g~~~~L~~l---~~~~~ivS~~~~~~~~~~l~~l~l~~~----f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  171 (298)
                      ++.|++.+.++.+   ++++.++|+.....+....+.+|+..-    ....+++.++..+      ++++..+.      
T Consensus       537 plr~~v~e~I~~l~~aGI~v~miTGD~~~tA~~ia~~~gi~~~~~~v~~~~~~g~~l~~~------~~~~~~~~------  604 (917)
T TIGR01116       537 PPRPEVADAIEKCRTAGIRVIMITGDNKETAEAICRRIGIFSPDEDVTFKSFTGREFDEM------GPAKQRAA------  604 (917)
T ss_pred             CCchhHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHcCCCCCCccccceeeeHHHHhhC------CHHHHHHh------
Confidence            4678888888776   488999999999999999999998531    1112222221110      00000000      


Q ss_pred             ccCCCCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHHcCCeEEEecC
Q 022360          172 TTTSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTVLIGK  251 (298)
Q Consensus       172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a~~aG~~~v~v~~  251 (298)
                         ..+.. +                      .++-.|+--..+++.++-..+.+.|+||+.||+.|.+.|+++.++...
T Consensus       605 ---~~~~~-v----------------------~ar~~P~~K~~iV~~lq~~g~~va~iGDG~ND~~alk~AdVGia~g~g  658 (917)
T TIGR01116       605 ---CRSAV-L----------------------FSRVEPSHKSELVELLQEQGEIVAMTGDGVNDAPALKKADIGIAMGSG  658 (917)
T ss_pred             ---hhcCe-E----------------------EEecCHHHHHHHHHHHHhcCCeEEEecCCcchHHHHHhCCeeEECCCC
Confidence               00000 1                      145556666777777776777888999999999999999998877522


Q ss_pred             -CCCCCCCCEEeCC--HHHHHHHh
Q 022360          252 -SQRVKGADYAFES--IHNIKEAI  272 (298)
Q Consensus       252 -~~~~~~ad~i~~s--~~~l~~~l  272 (298)
                       ...+..+|+++.+  +..+.+++
T Consensus       659 ~~~ak~aAD~vl~dd~f~~i~~~i  682 (917)
T TIGR01116       659 TEVAKEASDMVLADDNFATIVAAV  682 (917)
T ss_pred             cHHHHHhcCeEEccCCHHHHHHHH
Confidence             2346789999987  77776655

The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1, the latter of which is modelled by TIGR01522.

>PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional

Probab=97.73  E-value=0.00013  Score=75.41  Aligned_cols=107  Identities=14%  Similarity=0.193  Sum_probs=76.4

Q ss_pred             CCChhHHHHHHhC---CCcEEEEeCCChHHHHHHHHHhCCCCccceeEeecCCCCCCCCCCCCChhhHHHHHhhhcccCC
Q 022360           99 KPDPVLRSLLLSL---PLRKIIFTNADKVHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSDDEDDIAFVESAASTTTS  175 (298)
Q Consensus        99 ~~~~g~~~~L~~l---~~~~~ivS~~~~~~~~~~l~~l~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  175 (298)
                      +++|++.+.++.|   +++++++|+.....++.+.+.+|+..++      +.                            
T Consensus       568 ~~r~~a~~~i~~L~~~gi~~~llTGd~~~~a~~ia~~lgi~~~~------~~----------------------------  613 (741)
T PRK11033        568 TLRADARQAISELKALGIKGVMLTGDNPRAAAAIAGELGIDFRA------GL----------------------------  613 (741)
T ss_pred             CCchhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCeec------CC----------------------------
Confidence            6688999888877   4889999999999999999999996221      10                            


Q ss_pred             CCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHHcCCeEEEecCCC-C
Q 022360          176 ANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTVLIGKSQ-R  254 (298)
Q Consensus       176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a~~aG~~~v~v~~~~-~  254 (298)
                                            .      +..|+..++.    ++ .+..++||||+.||..+++.++++.++..... .
T Consensus       614 ----------------------~------p~~K~~~v~~----l~-~~~~v~mvGDgiNDapAl~~A~vgia~g~~~~~a  660 (741)
T PRK11033        614 ----------------------L------PEDKVKAVTE----LN-QHAPLAMVGDGINDAPAMKAASIGIAMGSGTDVA  660 (741)
T ss_pred             ----------------------C------HHHHHHHHHH----Hh-cCCCEEEEECCHHhHHHHHhCCeeEEecCCCHHH
Confidence                                  0      1223344444    33 23579999999999999999998888763322 3


Q ss_pred             CCCCCEEe--CCHHHHHHHh
Q 022360          255 VKGADYAF--ESIHNIKEAI  272 (298)
Q Consensus       255 ~~~ad~i~--~s~~~l~~~l  272 (298)
                      +..+|.++  +++..|.+.+
T Consensus       661 ~~~adivl~~~~l~~l~~~i  680 (741)
T PRK11033        661 LETADAALTHNRLRGLAQMI  680 (741)
T ss_pred             HHhCCEEEecCCHHHHHHHH
Confidence            56677766  4566665444

>TIGR01675 plant-AP plant acid phosphatase

Probab=97.70  E-value=0.00041  Score=61.35  Aligned_cols=48  Identities=10%  Similarity=0.097  Sum_probs=34.4

Q ss_pred             CCCCCChhHHHHHHhC---CCcEEEEeCCChHH---HHHHHHHhCCCCccceeEe
Q 022360           96 ENLKPDPVLRSLLLSL---PLRKIIFTNADKVH---AVKVLSRLGLEDCFEGIIC  144 (298)
Q Consensus        96 ~~~~~~~g~~~~L~~l---~~~~~ivS~~~~~~---~~~~l~~l~l~~~f~~i~~  144 (298)
                      ...++.|++.++++.+   +.+++++|+.+...   ...-|...|+..+ +.++-
T Consensus       117 ~~apaip~al~l~~~l~~~G~~Vf~lTGR~e~~r~~T~~nL~~~G~~~~-~~LiL  170 (229)
T TIGR01675       117 GAAPALPEGLKLYQKIIELGIKIFLLSGRWEELRNATLDNLINAGFTGW-KHLIL  170 (229)
T ss_pred             CCCCCCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHHcCCCCc-Ceeee
Confidence            3457889999998876   47899999988766   5566666777654 44443

This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases.

>COG4030 Uncharacterized protein conserved in archaea [Function unknown]

Probab=97.70  E-value=0.0013  Score=57.48  Aligned_cols=150  Identities=14%  Similarity=0.159  Sum_probs=82.2

Q ss_pred             CCCCChhHHHHHHhCCC--cEEEEeCCChHHHHHHHHHhCCCC--ccceeEeecCCCCCCCCC--------CCCChhhHH
Q 022360           97 NLKPDPVLRSLLLSLPL--RKIIFTNADKVHAVKVLSRLGLED--CFEGIICFETLNPTHKNT--------VSDDEDDIA  164 (298)
Q Consensus        97 ~~~~~~g~~~~L~~l~~--~~~ivS~~~~~~~~~~l~~l~l~~--~f~~i~~~~~~~~~~~~~--------~~~~~~~~~  164 (298)
                      ...+.||+.+.|+.++.  .-+|+|.+-.++++....++|+..  ...-.+.-++...+.+.+        +++.-+.-+
T Consensus        81 sa~lvPgA~etm~~l~~~~tp~v~STSY~qy~~r~a~~ig~Prg~~~~Te~~lD~~~~PeeeR~E~L~~~~~~~~~~gee  160 (315)
T COG4030          81 SAKLVPGAEETMATLQERWTPVVISTSYTQYLRRTASMIGVPRGELHGTEVDLDSIAVPEEEREELLSIIDVIASLSGEE  160 (315)
T ss_pred             hcccCCChHHHHHHHhccCCceEEeccHHHHHHHHHHhcCCCccccccccccCccccCChHHHHHHHHhcCccccccHHH
Confidence            36788999999999985  467899999999999999998731  111112222232221111        011100001


Q ss_pred             HHHhh--hcccCC-CCCCchhh---hccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccchHH
Q 022360          165 FVESA--ASTTTS-ANGPQIFD---IIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQA  238 (298)
Q Consensus       165 ~~~~~--~~~~~~-~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~  238 (298)
                      .++++  ...... .+.-+|++   ..|                  +--|..+.+-+++.-+++ ..++++|||.+|++|
T Consensus       161 lfe~lDe~F~rLip~E~gki~~~vk~VG------------------gg~ka~i~e~~~ele~~d-~sa~~VGDSItDv~m  221 (315)
T COG4030         161 LFEKLDELFSRLIPSEVGKIVESVKAVG------------------GGEKAKIMEGYCELEGID-FSAVVVGDSITDVKM  221 (315)
T ss_pred             HHHHHHHHHhhcCHHHHHHHHHhhhhcc------------------CcchhHHHHHHHhhcCCC-cceeEecCcccchHH
Confidence            11110  000000 11112222   111                  334456666666655544 459999999999999


Q ss_pred             HHHc-C---CeEEEecCCCCCCCCCEEeCCH
Q 022360          239 GKRV-G---LDTVLIGKSQRVKGADYAFESI  265 (298)
Q Consensus       239 a~~a-G---~~~v~v~~~~~~~~ad~i~~s~  265 (298)
                      .+.+ |   +.+++-++.+....||..+-+.
T Consensus       222 l~~~rgrGglAvaFNGNeYal~eAdVAvisp  252 (315)
T COG4030         222 LEAARGRGGLAVAFNGNEYALKEADVAVISP  252 (315)
T ss_pred             HHHhhccCceEEEecCCcccccccceEEecc
Confidence            9887 2   3334345556677777765553

>TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB

Probab=97.63  E-value=4.6e-05  Score=65.77  Aligned_cols=44  Identities=20%  Similarity=0.131  Sum_probs=41.5

Q ss_pred             CCCCHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHHcCCeEEE
Q 022360          205 CKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTVL  248 (298)
Q Consensus       205 ~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a~~aG~~~v~  248 (298)
                      +.+|+.+++.++++++++++++++|||+.||+.|++.+|+.++|
T Consensus       161 ~~~K~~~~~~~~~~~~~~~~~~~~~GD~~nD~~~~~~~~~~vam  204 (204)
T TIGR01484       161 GVDKGSALQALLKELNGKRDEILAFGDSGNDEEMFEVAGLAVAV  204 (204)
T ss_pred             CCChHHHHHHHHHHhCCCHHHEEEEcCCHHHHHHHHHcCCceEC
Confidence            58899999999999999999999999999999999999998774

The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear.

>PRK14010 potassium-transporting ATPase subunit B; Provisional

Probab=97.62  E-value=0.00021  Score=72.56  Aligned_cols=109  Identities=8%  Similarity=0.063  Sum_probs=82.0

Q ss_pred             CCChhHHHHHHhC---CCcEEEEeCCChHHHHHHHHHhCCCCccceeEeecCCCCCCCCCCCCChhhHHHHHhhhcccCC
Q 022360           99 KPDPVLRSLLLSL---PLRKIIFTNADKVHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSDDEDDIAFVESAASTTTS  175 (298)
Q Consensus        99 ~~~~g~~~~L~~l---~~~~~ivS~~~~~~~~~~l~~l~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  175 (298)
                      ++.|++.+.+++|   +++++++|+.....+..+.+.+|++++|..                                  
T Consensus       441 p~R~~a~e~I~~Lr~~GI~vvMiTGDn~~TA~aIA~elGI~~v~A~----------------------------------  486 (673)
T PRK14010        441 VIKDGLVERFRELREMGIETVMCTGDNELTAATIAKEAGVDRFVAE----------------------------------  486 (673)
T ss_pred             CCcHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCceEEcC----------------------------------
Confidence            5678888888776   488999999999999999999999764422                                  


Q ss_pred             CCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHHcCCeEEEecCC-CC
Q 022360          176 ANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTVLIGKS-QR  254 (298)
Q Consensus       176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a~~aG~~~v~v~~~-~~  254 (298)
                                                     -.|+--..+.+.++-...-+.|+||+.||..+.+.+.++.+|.... -+
T Consensus       487 -------------------------------~~PedK~~iV~~lQ~~G~~VaMtGDGvNDAPALa~ADVGIAMgsGTdvA  535 (673)
T PRK14010        487 -------------------------------CKPEDKINVIREEQAKGHIVAMTGDGTNDAPALAEANVGLAMNSGTMSA  535 (673)
T ss_pred             -------------------------------CCHHHHHHHHHHHHhCCCEEEEECCChhhHHHHHhCCEEEEeCCCCHHH
Confidence                                           1234455555555555567999999999999999999999887332 25


Q ss_pred             CCCCCEEeCC--HHHHHHHh
Q 022360          255 VKGADYAFES--IHNIKEAI  272 (298)
Q Consensus       255 ~~~ad~i~~s--~~~l~~~l  272 (298)
                      +..+|.+..+  +..|.+.+
T Consensus       536 keAADiVLldd~ls~Iv~av  555 (673)
T PRK14010        536 KEAANLIDLDSNPTKLMEVV  555 (673)
T ss_pred             HHhCCEEEcCCCHHHHHHHH
Confidence            8889998854  55555444

>PF03767 Acid_phosphat_B: HAD superfamily, subfamily IIIB (Acid phosphatase); InterPro: IPR005519 This family of class B acid phosphatases also contains a number of vegetative storage proteins (VPS25)

Probab=97.58  E-value=0.0001  Score=65.42  Aligned_cols=39  Identities=15%  Similarity=0.118  Sum_probs=27.4

Q ss_pred             CCChhHHHHHHhC---CCcEEEEeCCChH---HHHHHHHHhCCCC
Q 022360           99 KPDPVLRSLLLSL---PLRKIIFTNADKV---HAVKVLSRLGLED  137 (298)
Q Consensus        99 ~~~~g~~~~L~~l---~~~~~ivS~~~~~---~~~~~l~~l~l~~  137 (298)
                      ++.|++.++++.+   +..++++|+....   ....-|+..|...
T Consensus       115 ~aip~a~~l~~~~~~~G~~V~~iT~R~~~~r~~T~~nL~~~G~~~  159 (229)
T PF03767_consen  115 PAIPGALELYNYARSRGVKVFFITGRPESQREATEKNLKKAGFPG  159 (229)
T ss_dssp             EEETTHHHHHHHHHHTTEEEEEEEEEETTCHHHHHHHHHHHTTST
T ss_pred             cccHHHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHHcCCCc
Confidence            6678888887775   5889999996554   3445566677654

The acid phosphatase activity of VPS has been experimentally demonstrated [].; GO: 0003993 acid phosphatase activity; PDB: 3PCT_C 2I34_A 2I33_A 1Z5U_D 1Z5G_A 2AUT_C 1Z88_B 3OCV_A 3OCZ_A 3OCX_A ....

>TIGR01497 kdpB K+-transporting ATPase, B subunit

Probab=97.56  E-value=0.0002  Score=72.73  Aligned_cols=109  Identities=11%  Similarity=0.140  Sum_probs=78.7

Q ss_pred             CCChhHHHHHHhC---CCcEEEEeCCChHHHHHHHHHhCCCCccceeEeecCCCCCCCCCCCCChhhHHHHHhhhcccCC
Q 022360           99 KPDPVLRSLLLSL---PLRKIIFTNADKVHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSDDEDDIAFVESAASTTTS  175 (298)
Q Consensus        99 ~~~~g~~~~L~~l---~~~~~ivS~~~~~~~~~~l~~l~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  175 (298)
                      ++.|++.+.++.|   +++++++|+.....+..+.+.+|+++++....                                
T Consensus       446 ~~Rp~a~eaI~~l~~~Gi~v~miTGD~~~ta~~iA~~lGI~~v~a~~~--------------------------------  493 (675)
T TIGR01497       446 IVKGGIKERFAQLRKMGIKTIMITGDNRLTAAAIAAEAGVDDFIAEAT--------------------------------  493 (675)
T ss_pred             cchhHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCEEEcCCC--------------------------------
Confidence            5678888888777   48899999999999999999999975442110                                


Q ss_pred             CCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHHcCCeEEEecCCC-C
Q 022360          176 ANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTVLIGKSQ-R  254 (298)
Q Consensus       176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a~~aG~~~v~v~~~~-~  254 (298)
                                                   +..|...++.+.+    ....+.|+||+.||..+.+.++++.++..... .
T Consensus       494 -----------------------------PedK~~~v~~lq~----~g~~VamvGDG~NDapAL~~AdvGiAm~~gt~~a  540 (675)
T TIGR01497       494 -----------------------------PEDKIALIRQEQA----EGKLVAMTGDGTNDAPALAQADVGVAMNSGTQAA  540 (675)
T ss_pred             -----------------------------HHHHHHHHHHHHH----cCCeEEEECCCcchHHHHHhCCEeEEeCCCCHHH
Confidence                                         1223344554433    34469999999999999999999998874332 4


Q ss_pred             CCCCCEEeCC--HHHHHHHh
Q 022360          255 VKGADYAFES--IHNIKEAI  272 (298)
Q Consensus       255 ~~~ad~i~~s--~~~l~~~l  272 (298)
                      +..+|.+.-+  +..|.+.+
T Consensus       541 keaadivLldd~~s~Iv~av  560 (675)
T TIGR01497       541 KEAANMVDLDSDPTKLIEVV  560 (675)
T ss_pred             HHhCCEEECCCCHHHHHHHH
Confidence            7788888754  44444433

One sequence is apparently mis-annotated in the primary literature, but properly annotated by TIGR.

>COG2503 Predicted secreted acid phosphatase [General function prediction only]

Probab=97.51  E-value=0.00055  Score=60.33  Aligned_cols=58  Identities=17%  Similarity=0.252  Sum_probs=39.0

Q ss_pred             cCCCChhhHHHHhhcccCCCCCCCChhHHHHHHhCC---CcEEEEeCCChHH-H---HHHHHHhCCCCc
Q 022360           77 GYDFDYDDYHSFVHGRLPYENLKPDPVLRSLLLSLP---LRKIIFTNADKVH-A---VKVLSRLGLEDC  138 (298)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~L~~l~---~~~~ivS~~~~~~-~---~~~l~~l~l~~~  138 (298)
                      +..++++.|...+..    ....+.||+.++|....   ..++-+|+.+... .   ..-+.+.|+...
T Consensus       104 nk~f~pe~Wd~wV~a----~~sk~vpGA~eFl~Yvn~~Gg~ifyiSNR~~~~~~~~T~~nLk~~g~~~~  168 (274)
T COG2503         104 NKGFTPETWDKWVQA----KKSKAVPGAVEFLNYVNSNGGKIFYISNRDQENEKDGTIENLKSEGLPQV  168 (274)
T ss_pred             CCCCCccchHHHHhh----cccccCccHHHHHHHHHhcCcEEEEEeccchhcccchhHHHHHHcCcccc
Confidence            344445666666655    34688999999999874   6788999976664 2   345555676543

>TIGR01524 ATPase-IIIB_Mg magnesium-translocating P-type ATPase

Probab=97.49  E-value=0.00048  Score=72.35  Aligned_cols=134  Identities=10%  Similarity=0.213  Sum_probs=87.9

Q ss_pred             CCChhHHHHHHhC---CCcEEEEeCCChHHHHHHHHHhCCCCccceeEeecCCCCCCCCCCCCChhhHHHHHhhhcccCC
Q 022360           99 KPDPVLRSLLLSL---PLRKIIFTNADKVHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSDDEDDIAFVESAASTTTS  175 (298)
Q Consensus        99 ~~~~g~~~~L~~l---~~~~~ivS~~~~~~~~~~l~~l~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  175 (298)
                      ++.|++.+.++.|   +++++++|+.....+..+.+.+|+..  +.++++.++..      .++++..+.+....     
T Consensus       515 p~R~~~~~aI~~l~~aGI~vvmiTGD~~~tA~aIA~~lGI~~--~~v~~g~~l~~------~~~~el~~~~~~~~-----  581 (867)
T TIGR01524       515 PPKESTKEAIAALFKNGINVKVLTGDNEIVTARICQEVGIDA--NDFLLGADIEE------LSDEELARELRKYH-----  581 (867)
T ss_pred             CCchhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCC--CCeeecHhhhh------CCHHHHHHHhhhCe-----
Confidence            4567888877776   58899999999999999999999953  23555444322      11122222211111     


Q ss_pred             CCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHHcCCeEEEecC-CCC
Q 022360          176 ANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTVLIGK-SQR  254 (298)
Q Consensus       176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a~~aG~~~v~v~~-~~~  254 (298)
                           +      |                ..-.|+--..+.+.+.-....+.|+||+.||..+.+.|.++.++... .-+
T Consensus       582 -----v------f----------------Ar~~Pe~K~~iV~~lq~~G~vVam~GDGvNDapALk~AdVGIAmg~gtdvA  634 (867)
T TIGR01524       582 -----I------F----------------ARLTPMQKSRIIGLLKKAGHTVGFLGDGINDAPALRKADVGISVDTAADIA  634 (867)
T ss_pred             -----E------E----------------EECCHHHHHHHHHHHHhCCCEEEEECCCcccHHHHHhCCEEEEeCCccHHH
Confidence                 0      0                23344555556665555566799999999999999999999988733 235


Q ss_pred             CCCCCEEeCC--HHHHHHHh
Q 022360          255 VKGADYAFES--IHNIKEAI  272 (298)
Q Consensus       255 ~~~ad~i~~s--~~~l~~~l  272 (298)
                      +..+|.++.+  +..+.+.+
T Consensus       635 k~aADiVLldd~~~~I~~ai  654 (867)
T TIGR01524       635 KEASDIILLEKSLMVLEEGV  654 (867)
T ss_pred             HHhCCEEEecCChHHHHHHH
Confidence            8889998854  54444433

The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis.

>PRK01122 potassium-transporting ATPase subunit B; Provisional

Probab=97.48  E-value=0.00046  Score=70.25  Aligned_cols=109  Identities=9%  Similarity=0.158  Sum_probs=81.1

Q ss_pred             CCChhHHHHHHhC---CCcEEEEeCCChHHHHHHHHHhCCCCccceeEeecCCCCCCCCCCCCChhhHHHHHhhhcccCC
Q 022360           99 KPDPVLRSLLLSL---PLRKIIFTNADKVHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSDDEDDIAFVESAASTTTS  175 (298)
Q Consensus        99 ~~~~g~~~~L~~l---~~~~~ivS~~~~~~~~~~l~~l~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  175 (298)
                      ++.|++.+.++.|   +++++++|+.....++.+.+.+|++++|.                                   
T Consensus       445 ~~R~~~~eai~~Lr~~GI~vvMiTGDn~~TA~aIA~elGId~v~A-----------------------------------  489 (679)
T PRK01122        445 IVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAAEAGVDDFLA-----------------------------------  489 (679)
T ss_pred             cCchhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCcEEEc-----------------------------------
Confidence            4578888887776   58899999999999999999999975432                                   


Q ss_pred             CCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHHcCCeEEEecCCC-C
Q 022360          176 ANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTVLIGKSQ-R  254 (298)
Q Consensus       176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a~~aG~~~v~v~~~~-~  254 (298)
                                                    .-.|+--..+.++++-...-+.|+||+.||..+.+.+.++.+|..... +
T Consensus       490 ------------------------------~~~PedK~~iV~~lQ~~G~~VaMtGDGvNDAPALa~ADVGIAMgsGTdvA  539 (679)
T PRK01122        490 ------------------------------EATPEDKLALIRQEQAEGRLVAMTGDGTNDAPALAQADVGVAMNSGTQAA  539 (679)
T ss_pred             ------------------------------cCCHHHHHHHHHHHHHcCCeEEEECCCcchHHHHHhCCEeEEeCCCCHHH
Confidence                                          112344444555555455669999999999999999999999884323 4


Q ss_pred             CCCCCEEeCC--HHHHHHHh
Q 022360          255 VKGADYAFES--IHNIKEAI  272 (298)
Q Consensus       255 ~~~ad~i~~s--~~~l~~~l  272 (298)
                      +..+|.+..+  +..|.+.+
T Consensus       540 keAADiVLldd~~s~Iv~av  559 (679)
T PRK01122        540 KEAGNMVDLDSNPTKLIEVV  559 (679)
T ss_pred             HHhCCEEEeCCCHHHHHHHH
Confidence            8889998864  55555544

>PRK10517 magnesium-transporting ATPase MgtA; Provisional

Probab=97.47  E-value=0.00036  Score=73.49  Aligned_cols=134  Identities=15%  Similarity=0.229  Sum_probs=90.6

Q ss_pred             CCChhHHHHHHhC---CCcEEEEeCCChHHHHHHHHHhCCCCccceeEeecCCCCCCCCCCCCChhhHHHHHhhhcccCC
Q 022360           99 KPDPVLRSLLLSL---PLRKIIFTNADKVHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSDDEDDIAFVESAASTTTS  175 (298)
Q Consensus        99 ~~~~g~~~~L~~l---~~~~~ivS~~~~~~~~~~l~~l~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  175 (298)
                      ++.|++.+.++.|   ++++.++|+.....+..+.+.+|+..  +.++++.++..+      ++++..+.++...     
T Consensus       550 p~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~~IA~~lGI~~--~~v~~G~el~~l------~~~el~~~~~~~~-----  616 (902)
T PRK10517        550 PPKETTAPALKALKASGVTVKILTGDSELVAAKVCHEVGLDA--GEVLIGSDIETL------SDDELANLAERTT-----  616 (902)
T ss_pred             cchhhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCc--cCceeHHHHHhC------CHHHHHHHHhhCc-----
Confidence            4567777777766   58899999999999999999999952  345665554321      2222222221111     


Q ss_pred             CCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHHcCCeEEEecCC-CC
Q 022360          176 ANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTVLIGKS-QR  254 (298)
Q Consensus       176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a~~aG~~~v~v~~~-~~  254 (298)
                           +                      ...-.|+--..+.+.+.-...-+.|+||+.||..+.+.|.++.++.... -+
T Consensus       617 -----V----------------------fAr~sPe~K~~IV~~Lq~~G~vVam~GDGvNDaPALk~ADVGIAmg~gtdvA  669 (902)
T PRK10517        617 -----L----------------------FARLTPMHKERIVTLLKREGHVVGFMGDGINDAPALRAADIGISVDGAVDIA  669 (902)
T ss_pred             -----E----------------------EEEcCHHHHHHHHHHHHHCCCEEEEECCCcchHHHHHhCCEEEEeCCcCHHH
Confidence                 1                      0344456666666666656677999999999999999999999887332 35


Q ss_pred             CCCCCEEeCC--HHHHHHHh
Q 022360          255 VKGADYAFES--IHNIKEAI  272 (298)
Q Consensus       255 ~~~ad~i~~s--~~~l~~~l  272 (298)
                      +..+|.++.+  +..+.+.+
T Consensus       670 keaADiVLldd~~~~I~~ai  689 (902)
T PRK10517        670 REAADIILLEKSLMVLEEGV  689 (902)
T ss_pred             HHhCCEEEecCChHHHHHHH
Confidence            8899998854  55544433

>PF11019 DUF2608: Protein of unknown function (DUF2608); InterPro: IPR022565 This family is conserved in Bacteria

Probab=97.46  E-value=0.0043  Score=55.87  Aligned_cols=50  Identities=14%  Similarity=0.284  Sum_probs=41.4

Q ss_pred             CCCCHHHHHHHHHHcCCCCCcEEEEcCCccchHHHH----HcCCeEEEecCCCC
Q 022360          205 CKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGK----RVGLDTVLIGKSQR  254 (298)
Q Consensus       205 ~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a~----~aG~~~v~v~~~~~  254 (298)
                      +-+|..++..++.+.|..|+.+|||+|+..++....    ..|+...+.-+...
T Consensus       160 ~~~KG~~L~~fL~~~~~~pk~IIfIDD~~~nl~sv~~a~k~~~I~f~G~~Yt~~  213 (252)
T PF11019_consen  160 GQDKGEVLKYFLDKINQSPKKIIFIDDNKENLKSVEKACKKSGIDFIGFHYTGA  213 (252)
T ss_pred             CCccHHHHHHHHHHcCCCCCeEEEEeCCHHHHHHHHHHHhhCCCcEEEEEEcch
Confidence            677889999999999999999999999997776544    35888888765544

The function is not known.

>COG2217 ZntA Cation transport ATPase [Inorganic ion transport and metabolism]

Probab=97.45  E-value=0.00036  Score=71.28  Aligned_cols=109  Identities=12%  Similarity=0.239  Sum_probs=81.2

Q ss_pred             CCChhHHHHHHhC---CCcEEEEeCCChHHHHHHHHHhCCCCccceeEeecCCCCCCCCCCCCChhhHHHHHhhhcccCC
Q 022360           99 KPDPVLRSLLLSL---PLRKIIFTNADKVHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSDDEDDIAFVESAASTTTS  175 (298)
Q Consensus        99 ~~~~g~~~~L~~l---~~~~~ivS~~~~~~~~~~l~~l~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  175 (298)
                      .+.|+..+.++.|   +++++++|+.....++.+.+.+|+++++..+.                                
T Consensus       537 ~~R~~a~~aI~~L~~~Gi~~~mLTGDn~~~A~~iA~~lGId~v~Aell--------------------------------  584 (713)
T COG2217         537 ELRPDAKEAIAALKALGIKVVMLTGDNRRTAEAIAKELGIDEVRAELL--------------------------------  584 (713)
T ss_pred             CCChhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcChHhheccCC--------------------------------
Confidence            4567777776665   58899999999999999999999987765443                                


Q ss_pred             CCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHHcCCeEEEec-CCCC
Q 022360          176 ANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTVLIG-KSQR  254 (298)
Q Consensus       176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a~~aG~~~v~v~-~~~~  254 (298)
                                                   +..|.+.++++.    -....++||||+.||..+...+-++.+|.. ..-.
T Consensus       585 -----------------------------PedK~~~V~~l~----~~g~~VamVGDGINDAPALA~AdVGiAmG~GtDvA  631 (713)
T COG2217         585 -----------------------------PEDKAEIVRELQ----AEGRKVAMVGDGINDAPALAAADVGIAMGSGTDVA  631 (713)
T ss_pred             -----------------------------cHHHHHHHHHHH----hcCCEEEEEeCCchhHHHHhhcCeeEeecCCcHHH
Confidence                                         233334444444    344679999999999999999999988876 3346


Q ss_pred             CCCCCEEeCC--HHHHHHHh
Q 022360          255 VKGADYAFES--IHNIKEAI  272 (298)
Q Consensus       255 ~~~ad~i~~s--~~~l~~~l  272 (298)
                      .+.+|.++-+  ++.+.+.+
T Consensus       632 ~eaADvvL~~~dL~~v~~ai  651 (713)
T COG2217         632 IEAADVVLMRDDLSAVPEAI  651 (713)
T ss_pred             HHhCCEEEecCCHHHHHHHH
Confidence            8888987765  66665544

>PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A

Probab=97.37  E-value=0.00079  Score=51.94  Aligned_cols=47  Identities=26%  Similarity=0.205  Sum_probs=28.1

Q ss_pred             CChhHHHHHHhC---CCcEEEEeCCChH---HHHHHHHHhCCCCccceeEeec
Q 022360          100 PDPVLRSLLLSL---PLRKIIFTNADKV---HAVKVLSRLGLEDCFEGIICFE  146 (298)
Q Consensus       100 ~~~g~~~~L~~l---~~~~~ivS~~~~~---~~~~~l~~l~l~~~f~~i~~~~  146 (298)
                      +.||+.++|+.|   +.+++++||....   .....++.+|+.---+.++++.
T Consensus        15 ~ipga~e~l~~L~~~g~~~~~lTNns~~s~~~~~~~L~~~Gi~~~~~~i~ts~   67 (101)
T PF13344_consen   15 PIPGAVEALDALRERGKPVVFLTNNSSRSREEYAKKLKKLGIPVDEDEIITSG   67 (101)
T ss_dssp             E-TTHHHHHHHHHHTTSEEEEEES-SSS-HHHHHHHHHHTTTT--GGGEEEHH
T ss_pred             cCcCHHHHHHHHHHcCCCEEEEeCCCCCCHHHHHHHHHhcCcCCCcCEEEChH
Confidence            345555555554   5889999997533   3445557788865556677653

...

>PF03031 NIF: NLI interacting factor-like phosphatase; InterPro: IPR004274 The function of this domain is unclear

Probab=97.33  E-value=3.8e-05  Score=63.82  Aligned_cols=51  Identities=25%  Similarity=0.279  Sum_probs=40.9

Q ss_pred             CCCChhHHHHHHhCC--CcEEEEeCCChHHHHHHHHHhCC-CCccceeEeecCC
Q 022360           98 LKPDPVLRSLLLSLP--LRKIIFTNADKVHAVKVLSRLGL-EDCFEGIICFETL  148 (298)
Q Consensus        98 ~~~~~g~~~~L~~l~--~~~~ivS~~~~~~~~~~l~~l~l-~~~f~~i~~~~~~  148 (298)
                      +...||+.++|+.+.  +.++|.|.+...+++.+++.+.- ..+|+.++..+..
T Consensus        35 v~~RP~l~~FL~~l~~~~ev~i~T~~~~~ya~~v~~~ldp~~~~~~~~~~r~~~   88 (159)
T PF03031_consen   35 VKLRPGLDEFLEELSKHYEVVIWTSASEEYAEPVLDALDPNGKLFSRRLYRDDC   88 (159)
T ss_dssp             EEE-TTHHHHHHHHHHHCEEEEE-SS-HHHHHHHHHHHTTTTSSEEEEEEGGGS
T ss_pred             EeeCchHHHHHHHHHHhceEEEEEeehhhhhhHHHHhhhhhccccccccccccc
Confidence            456899999999885  78999999999999999999987 5688888876644

It is found in proteins of diverse function including phosphatases some of which may be active in active in ternary elongation complexes and a number of NLI interacting factors. In the phospatases this domain is often present N-terminal to the BRCT domain (IPR001357 from INTERPRO).; GO: 0005515 protein binding; PDB: 3L0Y_A 2GHQ_A 3PGL_A 3L0C_B 1TA0_A 2GHT_A 3L0B_B 1T9Z_A 3QLE_A 2Q5E_E ....

>TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase

Probab=97.27  E-value=0.00082  Score=71.29  Aligned_cols=136  Identities=10%  Similarity=-0.000  Sum_probs=89.7

Q ss_pred             CCChhHHHHHHhC---CCcEEEEeCCChHHHHHHHHHhCCCCccceeEeecCCCCCCCCCCCCChhhHHHHHhhhcccCC
Q 022360           99 KPDPVLRSLLLSL---PLRKIIFTNADKVHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSDDEDDIAFVESAASTTTS  175 (298)
Q Consensus        99 ~~~~g~~~~L~~l---~~~~~ivS~~~~~~~~~~l~~l~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  175 (298)
                      ++.|++.+.++.|   +++++++|+.....+..+.+.+|+.+--..++++.++...      ++++..+.+...      
T Consensus       579 plr~~~~~aI~~l~~aGI~v~miTGD~~~tA~~iA~~~GI~~~~~~vi~G~~~~~l------~~~el~~~i~~~------  646 (941)
T TIGR01517       579 PLRPGVREAVQECQRAGITVRMVTGDNIDTAKAIARNCGILTFGGLAMEGKEFRRL------VYEEMDPILPKL------  646 (941)
T ss_pred             CCchhHHHHHHHHHHCCCEEEEECCCChHHHHHHHHHcCCCCCCceEeeHHHhhhC------CHHHHHHHhccC------
Confidence            4567887777766   5889999999999999999999986432345555443220      111111111000      


Q ss_pred             CCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHHcCCeEEEecCC--C
Q 022360          176 ANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTVLIGKS--Q  253 (298)
Q Consensus       176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a~~aG~~~v~v~~~--~  253 (298)
                          .+                      .+.-.|+--..+.+.+.-...-+.|+||+.||..+.+.|-++.++...+  -
T Consensus       647 ----~V----------------------far~sPe~K~~iV~~lq~~g~vVam~GDGvNDapALk~AdVGIAmg~~gtdv  700 (941)
T TIGR01517       647 ----RV----------------------LARSSPLDKQLLVLMLKDMGEVVAVTGDGTNDAPALKLADVGFSMGISGTEV  700 (941)
T ss_pred             ----eE----------------------EEECCHHHHHHHHHHHHHCCCEEEEECCCCchHHHHHhCCcceecCCCccHH
Confidence                01                      0334445555566655555567999999999999999999998876232  3


Q ss_pred             CCCCCCEEeC--CHHHHHHHh
Q 022360          254 RVKGADYAFE--SIHNIKEAI  272 (298)
Q Consensus       254 ~~~~ad~i~~--s~~~l~~~l  272 (298)
                      ++..||+++.  ++..|.+.+
T Consensus       701 Ak~aADivL~dd~f~~I~~~i  721 (941)
T TIGR01517       701 AKEASDIILLDDNFASIVRAV  721 (941)
T ss_pred             HHHhCCEEEecCCHHHHHHHH
Confidence            5888999988  576666555

The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others.

>PRK15122 magnesium-transporting ATPase; Provisional

Probab=97.27  E-value=0.00073  Score=71.26  Aligned_cols=134  Identities=17%  Similarity=0.204  Sum_probs=90.5

Q ss_pred             CCChhHHHHHHhC---CCcEEEEeCCChHHHHHHHHHhCCCCccceeEeecCCCCCCCCCCCCChhhHHHHHhhhcccCC
Q 022360           99 KPDPVLRSLLLSL---PLRKIIFTNADKVHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSDDEDDIAFVESAASTTTS  175 (298)
Q Consensus        99 ~~~~g~~~~L~~l---~~~~~ivS~~~~~~~~~~l~~l~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  175 (298)
                      ++.|++.+.++.|   +++++++|+.....+..+.+.+|+..  +.++++.++..      .++++..+.+....     
T Consensus       550 p~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~aIA~~lGI~~--~~vi~G~el~~------~~~~el~~~v~~~~-----  616 (903)
T PRK15122        550 PPKESAAPAIAALRENGVAVKVLTGDNPIVTAKICREVGLEP--GEPLLGTEIEA------MDDAALAREVEERT-----  616 (903)
T ss_pred             ccHHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCC--CCccchHhhhh------CCHHHHHHHhhhCC-----
Confidence            4567888887776   58899999999999999999999952  34555544432      12222222211111     


Q ss_pred             CCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHHcCCeEEEecC-CCC
Q 022360          176 ANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTVLIGK-SQR  254 (298)
Q Consensus       176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a~~aG~~~v~v~~-~~~  254 (298)
                           +                      ...-.|+--.++.+.+.-...-+.|+||+.||..+.+.|.++.++... .-+
T Consensus       617 -----V----------------------fAr~sPe~K~~iV~~Lq~~G~vVamtGDGvNDaPALk~ADVGIAmg~gtdvA  669 (903)
T PRK15122        617 -----V----------------------FAKLTPLQKSRVLKALQANGHTVGFLGDGINDAPALRDADVGISVDSGADIA  669 (903)
T ss_pred             -----E----------------------EEEeCHHHHHHHHHHHHhCCCEEEEECCCchhHHHHHhCCEEEEeCcccHHH
Confidence                 1                      134455666677776666667799999999999999999999888732 235


Q ss_pred             CCCCCEEeC--CHHHHHHHh
Q 022360          255 VKGADYAFE--SIHNIKEAI  272 (298)
Q Consensus       255 ~~~ad~i~~--s~~~l~~~l  272 (298)
                      +..||.++.  ++..+.+.+
T Consensus       670 keaADiVLldd~f~~Iv~ai  689 (903)
T PRK15122        670 KESADIILLEKSLMVLEEGV  689 (903)
T ss_pred             HHhcCEEEecCChHHHHHHH
Confidence            899999984  455554433

>smart00775 LNS2 LNS2 domain

Probab=97.25  E-value=0.0045  Score=51.65  Aligned_cols=39  Identities=8%  Similarity=0.086  Sum_probs=28.0

Q ss_pred             CHHHHHHHHHHcCCCCCc-EEEEcCCccchHHHHHcCCeE
Q 022360          208 SELAIEKALKIASINPQR-TLFFEDSVRNIQAGKRVGLDT  246 (298)
Q Consensus       208 ~~~~~~~~l~~l~i~p~~-~i~iGDs~~Di~~a~~aG~~~  246 (298)
                      |.+.+..+.+.+.-..-. ++.|||+.+|+.+-+++|+..
T Consensus       103 K~~~l~~i~~~~~~~~~~f~~~~gn~~~D~~~y~~~gi~~  142 (157)
T smart00775      103 KIACLRDIKSLFPPQGNPFYAGFGNRITDVISYSAVGIPP  142 (157)
T ss_pred             HHHHHHHHHHhcCCCCCCEEEEeCCCchhHHHHHHcCCCh
Confidence            456777777655422223 446898899999999999884

This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance.

>TIGR01523 ATPase-IID_K-Na potassium and/or sodium efflux P-type ATPase, fungal-type

Probab=97.20  E-value=0.0013  Score=70.36  Aligned_cols=136  Identities=10%  Similarity=0.038  Sum_probs=87.8

Q ss_pred             CCChhHHHHHHhC---CCcEEEEeCCChHHHHHHHHHhCCCCc--c--------ceeEeecCCCCCCCCCCCCChhhHHH
Q 022360           99 KPDPVLRSLLLSL---PLRKIIFTNADKVHAVKVLSRLGLEDC--F--------EGIICFETLNPTHKNTVSDDEDDIAF  165 (298)
Q Consensus        99 ~~~~g~~~~L~~l---~~~~~ivS~~~~~~~~~~l~~l~l~~~--f--------~~i~~~~~~~~~~~~~~~~~~~~~~~  165 (298)
                      ++.|++.+.++.+   +++++++|+.....+..+.+.+|+..-  .        ..++++.++..      .++++..+.
T Consensus       646 p~r~~v~~aI~~l~~aGIkv~MiTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~vitG~~l~~------l~~~~l~~~  719 (1053)
T TIGR01523       646 PPRNESAGAVEKCHQAGINVHMLTGDFPETAKAIAQEVGIIPPNFIHDRDEIMDSMVMTGSQFDA------LSDEEVDDL  719 (1053)
T ss_pred             CCchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCccccccccccccceeeehHHhhh------cCHHHHHHH
Confidence            5567777777766   589999999999999999999998531  1        12333333221      011111111


Q ss_pred             HHhhhcccCCCCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHHcCCe
Q 022360          166 VESAASTTTSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLD  245 (298)
Q Consensus       166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a~~aG~~  245 (298)
                      +.         . ..++                      +.-.|+--..+.+.+.-...-+.|+||+.||..|.+.|.++
T Consensus       720 ~~---------~-~~V~----------------------ar~sP~~K~~iV~~lq~~g~~Vam~GDGvNDapaLk~AdVG  767 (1053)
T TIGR01523       720 KA---------L-CLVI----------------------ARCAPQTKVKMIEALHRRKAFCAMTGDGVNDSPSLKMANVG  767 (1053)
T ss_pred             hh---------c-CeEE----------------------EecCHHHHHHHHHHHHhcCCeeEEeCCCcchHHHHHhCCcc
Confidence            00         0 0011                      34455556666666655566799999999999999999999


Q ss_pred             EEEecCC--CCCCCCCEEeCC--HHHHHHHh
Q 022360          246 TVLIGKS--QRVKGADYAFES--IHNIKEAI  272 (298)
Q Consensus       246 ~v~v~~~--~~~~~ad~i~~s--~~~l~~~l  272 (298)
                      .++...+  ..+..+|+++.+  +..+.+.+
T Consensus       768 IAmg~~gt~vak~aADivl~dd~f~~I~~~i  798 (1053)
T TIGR01523       768 IAMGINGSDVAKDASDIVLSDDNFASILNAI  798 (1053)
T ss_pred             EecCCCccHHHHHhcCEEEecCCHHHHHHHH
Confidence            9875333  357889999965  66655544

The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump.

>COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism]

Probab=97.12  E-value=0.0019  Score=68.34  Aligned_cols=128  Identities=16%  Similarity=0.163  Sum_probs=89.9

Q ss_pred             CCChhHHHHHHhC---CCcEEEEeCCChHHHHHHHHHhCCCCcc--ceeEeecCCCCCCCCCCCCChhhHHHHHhhhccc
Q 022360           99 KPDPVLRSLLLSL---PLRKIIFTNADKVHAVKVLSRLGLEDCF--EGIICFETLNPTHKNTVSDDEDDIAFVESAASTT  173 (298)
Q Consensus        99 ~~~~g~~~~L~~l---~~~~~ivS~~~~~~~~~~l~~l~l~~~f--~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  173 (298)
                      +|.+++.+.++.|   ++++.++|+.....+..+.+.+|+..--  +.++.+.++..      .++++..+.++...   
T Consensus       547 ppr~~v~~aI~~l~~AGI~v~MiTGD~~~TA~aIa~~~Gi~~~~~~~~vi~G~el~~------l~~~el~~~~~~~~---  617 (917)
T COG0474         547 PPREDVKEAIEELREAGIKVWMITGDHVETAIAIAKECGIEAEAESALVIDGAELDA------LSDEELAELVEELS---  617 (917)
T ss_pred             CCCccHHHHHHHHHHCCCcEEEECCCCHHHHHHHHHHcCCCCCCCceeEeehHHhhh------cCHHHHHHHhhhCc---
Confidence            5667777776665   6999999999999999999999985443  23666655443      12222222221111   


Q ss_pred             CCCCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHHcCCeEEEecCCC
Q 022360          174 TSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTVLIGKSQ  253 (298)
Q Consensus       174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a~~aG~~~v~v~~~~  253 (298)
                             +                      +++-.|+--.++.+.+.-...-+.|.||+.||..|.+.|-++..+...|.
T Consensus       618 -------V----------------------fARvsP~qK~~IV~~lq~~g~vVamtGDGvNDapALk~ADVGIamg~~Gt  668 (917)
T COG0474         618 -------V----------------------FARVSPEQKARIVEALQKSGHVVAMTGDGVNDAPALKAADVGIAMGGEGT  668 (917)
T ss_pred             -------E----------------------EEEcCHHHHHHHHHHHHhCCCEEEEeCCCchhHHHHHhcCccEEecccHH
Confidence                   1                      15666777777777777777789999999999999999999998886443


Q ss_pred             --CCCCCCEEeCC
Q 022360          254 --RVKGADYAFES  264 (298)
Q Consensus       254 --~~~~ad~i~~s  264 (298)
                        ++..+|.+..+
T Consensus       669 daak~Aadivl~d  681 (917)
T COG0474         669 DAAKEAADIVLLD  681 (917)
T ss_pred             HHHHhhcceEeec
Confidence              46777776654

>PLN02382 probable sucrose-phosphatase

Probab=97.11  E-value=0.00053  Score=66.12  Aligned_cols=72  Identities=15%  Similarity=0.096  Sum_probs=53.7

Q ss_pred             CCCCHHHHHHHHHHc---CCCCCcEEEEcCCccchHHHHHcC-CeEEEecCCCC-CC--------CCCEEeCC---HHHH
Q 022360          205 CKPSELAIEKALKIA---SINPQRTLFFEDSVRNIQAGKRVG-LDTVLIGKSQR-VK--------GADYAFES---IHNI  268 (298)
Q Consensus       205 ~kp~~~~~~~~l~~l---~i~p~~~i~iGDs~~Di~~a~~aG-~~~v~v~~~~~-~~--------~ad~i~~s---~~~l  268 (298)
                      +-.|..+++.+++++   |++++++++|||+.||++|.+.+| .++++.+.... +.        .++++..+   -+.+
T Consensus       173 g~sKg~Al~~L~~~~~~~gi~~~~~iafGDs~NDleMl~~ag~~gvam~NA~~elk~~a~~~~~~~~~~~~a~~~~~~GI  252 (413)
T PLN02382        173 GAGKGQALAYLLKKLKAEGKAPVNTLVCGDSGNDAELFSVPDVYGVMVSNAQEELLQWYAENAKDNPKIIHATERCAAGI  252 (413)
T ss_pred             CCCHHHHHHHHHHHhhhcCCChhcEEEEeCCHHHHHHHhcCCCCEEEEcCCcHHHHHHHHhhccCCCcEEEcCCCCccHH
Confidence            477889999999999   999999999999999999999999 57776554332 21        23444332   3347


Q ss_pred             HHHhHHhh
Q 022360          269 KEAIPELW  276 (298)
Q Consensus       269 ~~~l~~~~  276 (298)
                      .+.|..+.
T Consensus       253 ~~al~~f~  260 (413)
T PLN02382        253 IQAIGHFN  260 (413)
T ss_pred             HHHHHHhC
Confidence            77777654

>TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase

Probab=97.10  E-value=0.0013  Score=68.13  Aligned_cols=137  Identities=16%  Similarity=0.119  Sum_probs=86.1

Q ss_pred             CCChhHHHHHHhC---CCcEEEEeCCChHHHHHHHHHhCCCCccceeEeecCCCCCCCCCCCCChhhHHHHHhhhcccCC
Q 022360           99 KPDPVLRSLLLSL---PLRKIIFTNADKVHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSDDEDDIAFVESAASTTTS  175 (298)
Q Consensus        99 ~~~~g~~~~L~~l---~~~~~ivS~~~~~~~~~~l~~l~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  175 (298)
                      ++.|++.+.++.|   +++++++|+.....+..+.+.+|+.+.   +++.+++......+..++++..+.++...+    
T Consensus       442 p~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~~IA~~lGI~~~---~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v----  514 (755)
T TIGR01647       442 PPRHDTKETIERARHLGVEVKMVTGDHLAIAKETARRLGLGTN---IYTADVLLKGDNRDDLPSGELGEMVEDADG----  514 (755)
T ss_pred             CChhhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCC---CcCHHHhcCCcchhhCCHHHHHHHHHhCCE----
Confidence            5678888887776   588999999999999999999999642   232222211000000111112222111110    


Q ss_pred             CCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHHcCCeEEEecCC-CC
Q 022360          176 ANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTVLIGKS-QR  254 (298)
Q Consensus       176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a~~aG~~~v~v~~~-~~  254 (298)
                                  |                .+-.|+--..+.+.+.-...-+.|+||+.||..+.+.|.++.++.... -+
T Consensus       515 ------------f----------------Ar~~Pe~K~~iV~~lq~~G~~VamvGDGvNDapAL~~AdVGIAm~~gtdvA  566 (755)
T TIGR01647       515 ------------F----------------AEVFPEHKYEIVEILQKRGHLVGMTGDGVNDAPALKKADVGIAVAGATDAA  566 (755)
T ss_pred             ------------E----------------EecCHHHHHHHHHHHHhcCCEEEEEcCCcccHHHHHhCCeeEEecCCcHHH
Confidence                        0                233455566666666666677999999999999999999998876322 24


Q ss_pred             CCCCCEEeCC--HHHHHH
Q 022360          255 VKGADYAFES--IHNIKE  270 (298)
Q Consensus       255 ~~~ad~i~~s--~~~l~~  270 (298)
                      +..+|.++.+  +..+.+
T Consensus       567 keaADivLl~d~l~~I~~  584 (755)
T TIGR01647       567 RSAADIVLTEPGLSVIVD  584 (755)
T ss_pred             HHhCCEEEEcCChHHHHH
Confidence            7889988765  444443

This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast.

>PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional

Probab=97.00  E-value=0.0016  Score=67.26  Aligned_cols=70  Identities=13%  Similarity=0.106  Sum_probs=57.2

Q ss_pred             CCCCHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHHcCCeEEEecCCCCCCCCCEEeCCHHHHHHHhHHhh
Q 022360          205 CKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTVLIGKSQRVKGADYAFESIHNIKEAIPELW  276 (298)
Q Consensus       205 ~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a~~aG~~~v~v~~~~~~~~ad~i~~s~~~l~~~l~~~~  276 (298)
                      +-.|..+++.+++  +++++.+++|||+.||+.|++.++.....+.-+.....|++.+++.+++..+|..+.
T Consensus       655 ~vnKG~al~~ll~--~~~~d~vl~~GD~~nDe~Mf~~~~~~~~~v~vG~~~s~A~~~l~~~~eV~~~L~~l~  724 (726)
T PRK14501        655 GVNKGRAVRRLLE--AGPYDFVLAIGDDTTDEDMFRALPETAITVKVGPGESRARYRLPSQREVRELLRRLL  724 (726)
T ss_pred             CCCHHHHHHHHHh--cCCCCEEEEECCCCChHHHHHhcccCceEEEECCCCCcceEeCCCHHHHHHHHHHHh
Confidence            3677899999999  788899999999999999999975333333334467889999999999999998875

>COG3700 AphA Acid phosphatase (class B) [General function prediction only]

Probab=96.94  E-value=0.0041  Score=52.49  Aligned_cols=26  Identities=27%  Similarity=0.400  Sum_probs=23.0

Q ss_pred             EEEEcCCccchHHHHHcCCeEEEecC
Q 022360          226 TLFFEDSVRNIQAGKRVGLDTVLIGK  251 (298)
Q Consensus       226 ~i~iGDs~~Di~~a~~aG~~~v~v~~  251 (298)
                      -|+.|||.+||.+|+++|...+-+.+
T Consensus       187 ~IhYGDSD~Di~AAkeaG~RgIRilR  212 (237)
T COG3700         187 RIHYGDSDNDITAAKEAGARGIRILR  212 (237)
T ss_pred             eEEecCCchhhhHHHhcCccceeEEe
Confidence            68999999999999999999887633

>TIGR01680 Veg_Stor_Prot vegetative storage protein

Probab=96.92  E-value=0.0075  Score=54.55  Aligned_cols=42  Identities=14%  Similarity=0.080  Sum_probs=28.8

Q ss_pred             CCCCCChhHHHHHHhC---CCcEEEEeCCChHHHHH---HHHHhCCCC
Q 022360           96 ENLKPDPVLRSLLLSL---PLRKIIFTNADKVHAVK---VLSRLGLED  137 (298)
Q Consensus        96 ~~~~~~~g~~~~L~~l---~~~~~ivS~~~~~~~~~---~l~~l~l~~  137 (298)
                      ...++.|++.++++.+   +.+++++|+.+...-..   -|...|...
T Consensus       142 ~~ApAlp~al~ly~~l~~~G~kIf~VSgR~e~~r~aT~~NL~kaGy~~  189 (275)
T TIGR01680       142 GEAPALPETLKNYNKLVSLGFKIIFLSGRLKDKQAVTEANLKKAGYHT  189 (275)
T ss_pred             ccCCCChHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHHcCCCC
Confidence            3467788999988876   47899999987654433   344455543

The proteins represented by this model are close relatives of the plant acid phosphatases (TIGR01675), are limited to members of the Phaseoleae including Glycine max (soybean) and Phaseolus vulgaris (kidney bean). These proteins are highly expressed in the leaves of repeatedly depodded plants. VSP differs most strinkingly from the acid phosphatases in the lack of the conserved nucleophilic aspartate residue in the N-terminus, thus, they should be inactive as phosphatases. This issue was confused by the publication in 1992 of an article claiming activity for the Glycine max VSP. In 1994 this assertion was refuted by the separation of the activity from the VSP.

>TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit

Probab=96.92  E-value=0.0032  Score=67.24  Aligned_cols=138  Identities=11%  Similarity=0.065  Sum_probs=86.5

Q ss_pred             CCChhHHHHHHhC---CCcEEEEeCCChHHHHHHHHHhCCCCccc------------------------eeEeecCCCCC
Q 022360           99 KPDPVLRSLLLSL---PLRKIIFTNADKVHAVKVLSRLGLEDCFE------------------------GIICFETLNPT  151 (298)
Q Consensus        99 ~~~~g~~~~L~~l---~~~~~ivS~~~~~~~~~~l~~l~l~~~f~------------------------~i~~~~~~~~~  151 (298)
                      ++.|++.+.++.+   +++++++|+.....+..+.+.+|+..--.                        .++++.++.. 
T Consensus       568 plr~~v~~aI~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~vi~G~~l~~-  646 (997)
T TIGR01106       568 PPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKGVGIISEGNETVEDIAARLNIPVSQVNPRDAKACVVHGSDLKD-  646 (997)
T ss_pred             CChHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCCccchhhhhhhccccccccccccccceEEEhHHhhh-
Confidence            4567888777776   58899999999999999999999842110                        1222211111 


Q ss_pred             CCCCCCCChhhHHHHHhhhcccCCCCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcC
Q 022360          152 HKNTVSDDEDDIAFVESAASTTTSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFED  231 (298)
Q Consensus       152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~p~~~i~iGD  231 (298)
                           .++++..+.+....        ..+                      .+.-.|+--..+.+.+.-...-+.|+||
T Consensus       647 -----l~~~el~~~~~~~~--------~~V----------------------faR~sPeqK~~IV~~lq~~g~vv~~~GD  691 (997)
T TIGR01106       647 -----MTSEQLDEILKYHT--------EIV----------------------FARTSPQQKLIIVEGCQRQGAIVAVTGD  691 (997)
T ss_pred             -----CCHHHHHHHHHhcC--------CEE----------------------EEECCHHHHHHHHHHHHHCCCEEEEECC
Confidence                 00111111110000        001                      1455556666666666655567999999


Q ss_pred             CccchHHHHHcCCeEEEecCCC--CCCCCCEEeCC--HHHHHHHh
Q 022360          232 SVRNIQAGKRVGLDTVLIGKSQ--RVKGADYAFES--IHNIKEAI  272 (298)
Q Consensus       232 s~~Di~~a~~aG~~~v~v~~~~--~~~~ad~i~~s--~~~l~~~l  272 (298)
                      +.||+.|.+.|.++.++...|.  .+..+|+++.+  +..+.+.+
T Consensus       692 G~ND~paLk~AdVGiamg~~G~~vak~aADivL~dd~f~~Iv~ai  736 (997)
T TIGR01106       692 GVNDSPALKKADIGVAMGIAGSDVSKQAADMILLDDNFASIVTGV  736 (997)
T ss_pred             CcccHHHHhhCCcceecCCcccHHHHHhhceEEecCCHHHHHHHH
Confidence            9999999999999998864333  57888999887  65555443

Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps.

>PLN02499 glycerol-3-phosphate acyltransferase

Probab=96.83  E-value=0.051  Score=53.17  Aligned_cols=37  Identities=14%  Similarity=0.225  Sum_probs=28.2

Q ss_pred             ChhHHHHHHhCCCcEEEEeCCChHHHHHHHHH-hCCCCc
Q 022360          101 DPVLRSLLLSLPLRKIIFTNADKVHAVKVLSR-LGLEDC  138 (298)
Q Consensus       101 ~~g~~~~L~~l~~~~~ivS~~~~~~~~~~l~~-l~l~~~  138 (298)
                      .+...+..+..+ +.+++|..+..+++..++. +|.+..
T Consensus        98 ~~e~~~~~~~~g-~~vVVTAsPrvmVEpFake~LG~D~V  135 (498)
T PLN02499         98 DMEAWKVFSSCD-KRVVVTRMPRVMVERFAKEHLRADEV  135 (498)
T ss_pred             CHHHHHHHHcCC-eEEEEeCCHHHHHHHHHHHhcCCceE
Confidence            344556666656 8999999999999999987 776543

>TIGR02250 FCP1_euk FCP1-like phosphatase, phosphatase domain

Probab=96.54  E-value=0.0055  Score=51.09  Aligned_cols=51  Identities=18%  Similarity=0.252  Sum_probs=43.3

Q ss_pred             CCCCChhHHHHHHhCC--CcEEEEeCCChHHHHHHHHHhCCC-Ccc-ceeEeecC
Q 022360           97 NLKPDPVLRSLLLSLP--LRKIIFTNADKVHAVKVLSRLGLE-DCF-EGIICFET  147 (298)
Q Consensus        97 ~~~~~~g~~~~L~~l~--~~~~ivS~~~~~~~~~~l~~l~l~-~~f-~~i~~~~~  147 (298)
                      ...++||+.++|+.+.  +.++|+|++...++..+++.++.. .+| +.+++.++
T Consensus        56 ~v~~rPgv~efL~~l~~~yel~I~T~~~~~yA~~vl~~ldp~~~~F~~ri~~rd~  110 (156)
T TIGR02250        56 LTKLRPFLHEFLKEASKLYEMHVYTMGTRAYAQAIAKLIDPDGKYFGDRIISRDE  110 (156)
T ss_pred             EEEECCCHHHHHHHHHhhcEEEEEeCCcHHHHHHHHHHhCcCCCeeccEEEEecc
Confidence            4678999999999985  679999999999999999999987 488 55666654

This domain is related to domains found in the human NLI interacting factor-like phosphatases, and together both are detected by the Pfam model pfam03031.

>PLN02580 trehalose-phosphatase

Probab=96.54  E-value=0.01  Score=56.53  Aligned_cols=71  Identities=17%  Similarity=0.191  Sum_probs=57.4

Q ss_pred             CCCHHHHHHHHHHcCCCCCc---EEEEcCCccchHHHHHc-----CCeEEEecCCCCCCCCCEEeCCHHHHHHHhHHhhc
Q 022360          206 KPSELAIEKALKIASINPQR---TLFFEDSVRNIQAGKRV-----GLDTVLIGKSQRVKGADYAFESIHNIKEAIPELWE  277 (298)
Q Consensus       206 kp~~~~~~~~l~~l~i~p~~---~i~iGDs~~Di~~a~~a-----G~~~v~v~~~~~~~~ad~i~~s~~~l~~~l~~~~~  277 (298)
                      -.|..+++.++++++++..+   .++|||..||..|++.+     |+.+ .+..+...-.|.|.+.+..++.++|..+..
T Consensus       300 ~~KG~Av~~Ll~~~g~~~~d~~~pi~iGDD~TDedmF~~L~~~~~G~~I-~Vgn~~~~t~A~y~L~dp~eV~~~L~~L~~  378 (384)
T PLN02580        300 WNKGKAVEFLLESLGLSNCDDVLPIYIGDDRTDEDAFKVLREGNRGYGI-LVSSVPKESNAFYSLRDPSEVMEFLKSLVT  378 (384)
T ss_pred             CCHHHHHHHHHHhcCCCcccceeEEEECCCchHHHHHHhhhccCCceEE-EEecCCCCccceEEcCCHHHHHHHHHHHHH
Confidence            56779999999999998763   38999999999999963     5544 344444566789999999999999988764

>KOG0202 consensus Ca2+ transporting ATPase [Inorganic ion transport and metabolism]

Probab=96.44  E-value=0.0069  Score=61.88  Aligned_cols=131  Identities=12%  Similarity=0.112  Sum_probs=84.5

Q ss_pred             CCChhHHHHHHhC---CCcEEEEeCCChHHHHHHHHHhCCCCccceeEeecCCCCCCCCCCCCC-hhhHHHHHhhhcccC
Q 022360           99 KPDPVLRSLLLSL---PLRKIIFTNADKVHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSDD-EDDIAFVESAASTTT  174 (298)
Q Consensus        99 ~~~~g~~~~L~~l---~~~~~ivS~~~~~~~~~~l~~l~l~~~f~~i~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~  174 (298)
                      +|.+++.+.++.+   ++++.++|+.....++.+.+++|+...-+. +..   ..+.|..|.+- ...+..+......= 
T Consensus       584 PPR~ev~~ai~~c~~aGIrV~mITGD~~~TA~AI~r~iGi~~~~ed-~~~---~~~TG~efD~ls~~~~~~~~~~~~vF-  658 (972)
T KOG0202|consen  584 PPRPEVADAIELCRQAGIRVIMITGDNKETAEAIAREIGIFSEDED-VSS---MALTGSEFDDLSDEELDDAVRRVLVF-  658 (972)
T ss_pred             CCchhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHhCCCcCCcc-ccc---cccchhhhhcCCHHHHHHHhhcceEE-
Confidence            6778877777665   699999999999999999999997544331 111   11233333221 11222211111111 


Q ss_pred             CCCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHHcCCeEEEecCCC-
Q 022360          175 SANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTVLIGKSQ-  253 (298)
Q Consensus       175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a~~aG~~~v~v~~~~-  253 (298)
                                                    ..-.|+.-.++.+.|+-..+=+.|-||+.||-.+.+.|.++.+|...|- 
T Consensus       659 ------------------------------aR~~P~HK~kIVeaLq~~geivAMTGDGVNDApALK~AdIGIAMG~~GTd  708 (972)
T KOG0202|consen  659 ------------------------------ARAEPQHKLKIVEALQSRGEVVAMTGDGVNDAPALKKADIGIAMGISGTD  708 (972)
T ss_pred             ------------------------------EecCchhHHHHHHHHHhcCCEEEecCCCccchhhhhhcccceeecCCccH
Confidence                                          1222345556666666566668899999999999999999999984443 


Q ss_pred             -CCCCCCEEeCC
Q 022360          254 -RVKGADYAFES  264 (298)
Q Consensus       254 -~~~~ad~i~~s  264 (298)
                       .+..+|.++.|
T Consensus       709 VaKeAsDMVL~D  720 (972)
T KOG0202|consen  709 VAKEASDMVLAD  720 (972)
T ss_pred             hhHhhhhcEEec
Confidence             58888888765

>KOG0207 consensus Cation transport ATPase [Inorganic ion transport and metabolism]

Probab=96.36  E-value=0.017  Score=59.57  Aligned_cols=97  Identities=14%  Similarity=0.200  Sum_probs=68.2

Q ss_pred             hHHHHHHhCCCcEEEEeCCChHHHHHHHHHhCCCCccceeEeecCCCCCCCCCCCCChhhHHHHHhhhcccCCCCCCchh
Q 022360          103 VLRSLLLSLPLRKIIFTNADKVHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSDDEDDIAFVESAASTTTSANGPQIF  182 (298)
Q Consensus       103 g~~~~L~~l~~~~~ivS~~~~~~~~~~l~~l~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  182 (298)
                      .+...|+.++++++++|+.+...++.+.+.+|++    .++.--                                    
T Consensus       730 ~av~~Lk~~Gi~v~mLTGDn~~aA~svA~~VGi~----~V~aev------------------------------------  769 (951)
T KOG0207|consen  730 LAVAELKSMGIKVVMLTGDNDAAARSVAQQVGID----NVYAEV------------------------------------  769 (951)
T ss_pred             HHHHHHHhcCceEEEEcCCCHHHHHHHHHhhCcc----eEEecc------------------------------------
Confidence            3445566667999999999999999999999944    444310                                    


Q ss_pred             hhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHHcCCeEEEecC-CCCCCCCCEE
Q 022360          183 DIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTVLIGK-SQRVKGADYA  261 (298)
Q Consensus       183 ~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a~~aG~~~v~v~~-~~~~~~ad~i  261 (298)
                                     .      +.-|.+.++.+.+    +...++|+||+.||-.+...+.++.++... +-+...+|.+
T Consensus       770 ---------------~------P~~K~~~Ik~lq~----~~~~VaMVGDGINDaPALA~AdVGIaig~gs~vAieaADIV  824 (951)
T KOG0207|consen  770 ---------------L------PEQKAEKIKEIQK----NGGPVAMVGDGINDAPALAQADVGIAIGAGSDVAIEAADIV  824 (951)
T ss_pred             ---------------C------chhhHHHHHHHHh----cCCcEEEEeCCCCccHHHHhhccceeeccccHHHHhhCCEE
Confidence                           0      1223345555444    445699999999999999888888776644 3457788887


Q ss_pred             eCC
Q 022360          262 FES  264 (298)
Q Consensus       262 ~~s  264 (298)
                      +-.
T Consensus       825 Lmr  827 (951)
T KOG0207|consen  825 LMR  827 (951)
T ss_pred             EEc
Confidence            654

>PF05152 DUF705: Protein of unknown function (DUF705); InterPro: IPR007827 This family contains uncharacterised baculoviral proteins

Probab=96.27  E-value=0.032  Score=50.57  Aligned_cols=40  Identities=25%  Similarity=0.367  Sum_probs=33.6

Q ss_pred             HHhCCCcEEEEeCCChHHHHHHHHHhCCCCccceeEeecC
Q 022360          108 LLSLPLRKIIFTNADKVHAVKVLSRLGLEDCFEGIICFET  147 (298)
Q Consensus       108 L~~l~~~~~ivS~~~~~~~~~~l~~l~l~~~f~~i~~~~~  147 (298)
                      |+..+.-+++=|.|..+++.+.++.+++.++|+.+++.+.
T Consensus       154 Lk~~g~vLvLWSyG~~eHV~~sl~~~~L~~~Fd~ii~~G~  193 (297)
T PF05152_consen  154 LKEQGCVLVLWSYGNREHVRHSLKELKLEGYFDIIICGGN  193 (297)
T ss_pred             HHHcCCEEEEecCCCHHHHHHHHHHhCCccccEEEEeCCc
Confidence            3444455788899999999999999999999999998753

>PLN02645 phosphoglycolate phosphatase

Probab=96.10  E-value=0.027  Score=52.24  Aligned_cols=88  Identities=17%  Similarity=0.085  Sum_probs=64.5

Q ss_pred             CCCChhHHHHHHhC---CCcEEEEeCCChHH---HHHHHHHhCCCCccceeEeecCCCCCCCCCCCCChhhHHHHHhhhc
Q 022360           98 LKPDPVLRSLLLSL---PLRKIIFTNADKVH---AVKVLSRLGLEDCFEGIICFETLNPTHKNTVSDDEDDIAFVESAAS  171 (298)
Q Consensus        98 ~~~~~g~~~~L~~l---~~~~~ivS~~~~~~---~~~~l~~l~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  171 (298)
                      -.++||+.++|+.|   +.+++++||.....   ....++.+|+...++.++++.                         
T Consensus        43 ~~~~~ga~e~l~~lr~~g~~~~~~TN~~~~~~~~~~~~l~~lGi~~~~~~I~ts~-------------------------   97 (311)
T PLN02645         43 DKLIEGVPETLDMLRSMGKKLVFVTNNSTKSRAQYGKKFESLGLNVTEEEIFSSS-------------------------   97 (311)
T ss_pred             CccCcCHHHHHHHHHHCCCEEEEEeCCCCCCHHHHHHHHHHCCCCCChhhEeehH-------------------------
Confidence            46789999988876   47899999977433   344556788876666666542                         


Q ss_pred             ccCCCCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHHcCCeEEE
Q 022360          172 TTTSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTVL  248 (298)
Q Consensus       172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a~~aG~~~v~  248 (298)
                                                            ......+++.+......++++++..+.+.++.+|+..+.
T Consensus        98 --------------------------------------~~~~~~l~~~~~~~~~~V~viG~~~~~~~l~~~Gi~~~~  136 (311)
T PLN02645         98 --------------------------------------FAAAAYLKSINFPKDKKVYVIGEEGILEELELAGFQYLG  136 (311)
T ss_pred             --------------------------------------HHHHHHHHhhccCCCCEEEEEcCHHHHHHHHHCCCEEec
Confidence                                                  456666676666555678888888999999999998764

>PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming]

Probab=96.07  E-value=0.016  Score=60.81  Aligned_cols=74  Identities=15%  Similarity=0.133  Sum_probs=58.6

Q ss_pred             CCCCHHHHHHHHHH---cCCCCCcEEEEcCCccchHHHHHcCCe-----------EEEecCCCCCCCCCEEeCCHHHHHH
Q 022360          205 CKPSELAIEKALKI---ASINPQRTLFFEDSVRNIQAGKRVGLD-----------TVLIGKSQRVKGADYAFESIHNIKE  270 (298)
Q Consensus       205 ~kp~~~~~~~~l~~---l~i~p~~~i~iGDs~~Di~~a~~aG~~-----------~v~v~~~~~~~~ad~i~~s~~~l~~  270 (298)
                      +-.|..+++.++++   +|+.++.+++|||+.||..|++.++-.           .+.+.-|.....|.|.+++..++.+
T Consensus       760 gvnKG~Al~~Ll~~~~~~g~~~d~vl~~GDD~nDedMF~~~~~~~~g~~~~~~~~~~~v~VG~~~S~A~y~L~d~~eV~~  839 (854)
T PLN02205        760 GVSKGLVAKRLLSIMQERGMLPDFVLCIGDDRSDEDMFEVITSSMAGPSIAPRAEVFACTVGQKPSKAKYYLDDTAEIVR  839 (854)
T ss_pred             CCCHHHHHHHHHHHHHhcCCCcccEEEEcCCccHHHHHHHhhhhccCCcccccccceeEEECCCCccCeEecCCHHHHHH
Confidence            46778999999754   689999999999999999999988621           1223334456788899999999999


Q ss_pred             HhHHhhcc
Q 022360          271 AIPELWES  278 (298)
Q Consensus       271 ~l~~~~~~  278 (298)
                      +|..+.+.
T Consensus       840 lL~~L~~~  847 (854)
T PLN02205        840 LMQGLASV  847 (854)
T ss_pred             HHHHHHhc
Confidence            99988753

>COG5663 Uncharacterized conserved protein [Function unknown]

Probab=96.04  E-value=0.026  Score=47.17  Aligned_cols=57  Identities=28%  Similarity=0.318  Sum_probs=38.7

Q ss_pred             HHHHcCCCCCcEEEEcCCc-cchHHHHHcCCeEEEecCCCCCCCCCE---EeCCHHHHHHHhHHh
Q 022360          215 ALKIASINPQRTLFFEDSV-RNIQAGKRVGLDTVLIGKSQRVKGADY---AFESIHNIKEAIPEL  275 (298)
Q Consensus       215 ~l~~l~i~p~~~i~iGDs~-~Di~~a~~aG~~~v~v~~~~~~~~ad~---i~~s~~~l~~~l~~~  275 (298)
                      +.+.++++    ++|.|+. |-.+.|+++|++++.++..+.+.+++.   .+.+..+..+++.+.
T Consensus       129 ~vrth~id----lf~ed~~~na~~iAk~~~~~vilins~ynRkp~~~niiR~~~w~e~y~~vd~~  189 (194)
T COG5663         129 AVRTHNID----LFFEDSHDNAGQIAKNAGIPVILINSPYNRKPAAKNIIRANNWAEAYEWVDSR  189 (194)
T ss_pred             hhHhhccC----ccccccCchHHHHHHhcCCcEEEecCcccccchHHHHHHHHhHHHHHHHHHHH
Confidence            44677775    4899998 788889999999999988876544432   223334444544433

>TIGR01652 ATPase-Plipid phospholipid-translocating P-type ATPase, flippase

Probab=95.81  E-value=0.013  Score=62.97  Aligned_cols=68  Identities=16%  Similarity=0.299  Sum_probs=48.5

Q ss_pred             CCCCHHHHHHHHHHcCCC-CCcEEEEcCCccchHHHHHcCCeEEEecCC--CCCCCCCEEeCCHHHHHHHh
Q 022360          205 CKPSELAIEKALKIASIN-PQRTLFFEDSVRNIQAGKRVGLDTVLIGKS--QRVKGADYAFESIHNIKEAI  272 (298)
Q Consensus       205 ~kp~~~~~~~~l~~l~i~-p~~~i~iGDs~~Di~~a~~aG~~~v~v~~~--~~~~~ad~i~~s~~~l~~~l  272 (298)
                      ++-.|.--..+.+.+.-. ..-+.++||+.||+.|.+.|.++.-..+..  .+...+|+++.+++.|...|
T Consensus       749 aR~sP~qK~~IV~~lk~~~~~~vl~iGDG~ND~~mlk~AdVGIgi~g~eg~qA~~aaD~~i~~F~~L~~ll  819 (1057)
T TIGR01652       749 CRVSPSQKADVVRLVKKSTGKTTLAIGDGANDVSMIQEADVGVGISGKEGMQAVMASDFAIGQFRFLTKLL  819 (1057)
T ss_pred             eCCCHHHHHHHHHHHHhcCCCeEEEEeCCCccHHHHhhcCeeeEecChHHHHHHHhhhhhhhhHHHHHHHH
Confidence            344455445555544433 567999999999999999998877433333  25778999999988887766

This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes.

>TIGR01494 ATPase_P-type ATPase, P-type (transporting), HAD superfamily, subfamily IC

Probab=95.78  E-value=0.037  Score=54.61  Aligned_cols=94  Identities=14%  Similarity=0.140  Sum_probs=67.2

Q ss_pred             CCChhHHHHHHhC---CCcEEEEeCCChHHHHHHHHHhCCCCccceeEeecCCCCCCCCCCCCChhhHHHHHhhhcccCC
Q 022360           99 KPDPVLRSLLLSL---PLRKIIFTNADKVHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSDDEDDIAFVESAASTTTS  175 (298)
Q Consensus        99 ~~~~g~~~~L~~l---~~~~~ivS~~~~~~~~~~l~~l~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  175 (298)
                      ++.|++.+.+..|   +++++++|+........+.+.+|+       + +                              
T Consensus       347 ~lr~~~~~~i~~l~~~gi~~~~ltGD~~~~a~~ia~~lgi-------~-~------------------------------  388 (499)
T TIGR01494       347 PLRDDAKETISELREAGIRVIMLTGDNVLTAKAIAKELGI-------F-A------------------------------  388 (499)
T ss_pred             CCchhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCc-------e-e------------------------------
Confidence            4567777776665   577899999999999999999886       1 1                              


Q ss_pred             CCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHHcCCeEEEecCCCCC
Q 022360          176 ANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTVLIGKSQRV  255 (298)
Q Consensus       176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a~~aG~~~v~v~~~~~~  255 (298)
                                                    .-.|+--..+.+++.-....+.++||+.||..+.+.++++.++.    .+
T Consensus       389 ------------------------------~~~p~~K~~~v~~l~~~g~~v~~vGDg~nD~~al~~Advgia~~----a~  434 (499)
T TIGR01494       389 ------------------------------RVTPEEKAALVEALQKKGRVVAMTGDGVNDAPALKKADVGIAMG----AK  434 (499)
T ss_pred             ------------------------------ccCHHHHHHHHHHHHHCCCEEEEECCChhhHHHHHhCCCccccc----hH
Confidence                                          11123333444433333467999999999999999999886654    56


Q ss_pred             CCCCEEeCC
Q 022360          256 KGADYAFES  264 (298)
Q Consensus       256 ~~ad~i~~s  264 (298)
                      ..+|.++.+
T Consensus       435 ~~adivl~~  443 (499)
T TIGR01494       435 AAADIVLLD  443 (499)
T ss_pred             HhCCeEEec
Confidence            678888876

The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily.

>COG1877 OtsB Trehalose-6-phosphatase [Carbohydrate transport and metabolism]

Probab=95.62  E-value=0.21  Score=45.35  Aligned_cols=48  Identities=19%  Similarity=0.138  Sum_probs=37.4

Q ss_pred             CCCCHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHHcC---CeEEEecCC
Q 022360          205 CKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVG---LDTVLIGKS  252 (298)
Q Consensus       205 ~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a~~aG---~~~v~v~~~  252 (298)
                      +..|..++.+++++...+..-.++.||..+|=.++..+.   -.++-+..+
T Consensus       180 ~~~KG~a~~~i~~~~~~~~~~~~~aGDD~TDE~~F~~v~~~~~~~v~v~~~  230 (266)
T COG1877         180 GVSKGAAIKYIMDELPFDGRFPIFAGDDLTDEDAFAAVNKLDSITVKVGVG  230 (266)
T ss_pred             CcchHHHHHHHHhcCCCCCCcceecCCCCccHHHHHhhccCCCceEEecCC
Confidence            355779999999988888777999999999988888886   344444444

>COG3882 FkbH Predicted enzyme involved in methoxymalonyl-ACP biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]

Probab=95.43  E-value=0.054  Score=52.44  Aligned_cols=40  Identities=20%  Similarity=0.187  Sum_probs=35.6

Q ss_pred             CCCCHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHHcCC
Q 022360          205 CKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGL  244 (298)
Q Consensus       205 ~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a~~aG~  244 (298)
                      =.||.+.++++++++|+.-+..++++|+...-+-.++-+-
T Consensus       309 W~~K~eNirkIAkklNlg~dSmvFiDD~p~ErE~vk~~~~  348 (574)
T COG3882         309 WDPKAENIRKIAKKLNLGLDSMVFIDDNPAERELVKRELP  348 (574)
T ss_pred             CCcchhhHHHHHHHhCCCccceEEecCCHHHHHHHHhcCc
Confidence            3788899999999999999999999999988887777764

>TIGR02245 HAD_IIID1 HAD-superfamily subfamily IIID hydrolase, TIGR02245

Probab=95.42  E-value=0.049  Score=47.10  Aligned_cols=37  Identities=19%  Similarity=0.239  Sum_probs=32.9

Q ss_pred             CCChhHHHHHHhCC--CcEEEEeCCChHHHHHHHHHhCC
Q 022360           99 KPDPVLRSLLLSLP--LRKIIFTNADKVHAVKVLSRLGL  135 (298)
Q Consensus        99 ~~~~g~~~~L~~l~--~~~~ivS~~~~~~~~~~l~~l~l  135 (298)
                      ...|++.++|+.+.  +.++|.|.+...++..++..+++
T Consensus        45 ~kRP~l~eFL~~~~~~feIvVwTAa~~~ya~~~l~~l~~   83 (195)
T TIGR02245        45 LMRPYLHEFLTSAYEDYDIVIWSATSMKWIEIKMTELGV   83 (195)
T ss_pred             EeCCCHHHHHHHHHhCCEEEEEecCCHHHHHHHHHHhcc
Confidence            45799999999884  78999999999999999998876

This family of sequences appears to belong to the Haloacid Dehalogenase (HAD) superfamily of enzymes by virtue of the presence of three catalytic domains, in this case: LLVLD(ILV)D(YH)T, I(VMG)IWS, and (DN)(VC)K(PA)Lx{15-17}T(IL)(MH)(FV)DD(IL)(GRS)(RK)N. Since this family has no large "cap" domain between motifs 1 and 2 or between 2 and 3, it is formally a "class III" HAD.

>TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V)

Probab=95.42  E-value=0.09  Score=56.71  Aligned_cols=68  Identities=13%  Similarity=0.073  Sum_probs=49.9

Q ss_pred             CCCCHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHHcCCeEEEecCCCCCCCCCEEe--CCHHHHHHHhH
Q 022360          205 CKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTVLIGKSQRVKGADYAF--ESIHNIKEAIP  273 (298)
Q Consensus       205 ~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a~~aG~~~v~v~~~~~~~~ad~i~--~s~~~l~~~l~  273 (298)
                      ..-.|+--..+.+.+.-...-+.|+||+.||..+.+.|-++.++... ++...|+++.  +++..+.++|+
T Consensus       783 AR~sP~qK~~iV~~lq~~g~~V~m~GDG~ND~~ALK~AdVGIam~~~-das~AA~f~l~~~~~~~I~~~I~  852 (1054)
T TIGR01657       783 ARMAPDQKETLVELLQKLDYTVGMCGDGANDCGALKQADVGISLSEA-EASVAAPFTSKLASISCVPNVIR  852 (1054)
T ss_pred             EecCHHHHHHHHHHHHhCCCeEEEEeCChHHHHHHHhcCcceeeccc-cceeecccccCCCcHHHHHHHHH
Confidence            45556667777776666666799999999999999999999887654 3446677774  45666666554

These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in.

>COG5610 Predicted hydrolase (HAD superfamily) [General function prediction only]

Probab=95.40  E-value=0.035  Score=53.36  Aligned_cols=90  Identities=17%  Similarity=0.191  Sum_probs=70.0

Q ss_pred             HHHHhC---CCcEEEEeC--CChHHHHHHHHHhCCCCccceeEeecCCCCCCCCCCCCChhhHHHHHhhhcccCCCCCCc
Q 022360          106 SLLLSL---PLRKIIFTN--ADKVHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSDDEDDIAFVESAASTTTSANGPQ  180 (298)
Q Consensus       106 ~~L~~l---~~~~~ivS~--~~~~~~~~~l~~l~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  180 (298)
                      ++.+.+   +.+++++|.  -+...++..+...|.+-.-..++.++...-                              
T Consensus       106 eL~e~ai~n~krVIlISDMYlps~Il~~~L~s~g~d~~nipiY~S~e~rl------------------------------  155 (635)
T COG5610         106 ELVEEAIKNEKRVILISDMYLPSSILRTFLNSFGPDFNNIPIYMSSEFRL------------------------------  155 (635)
T ss_pred             HHHHHHHhCCCeEEEEecccCcHHHHHHHHHhcCCCccCceeeecceeeh------------------------------
Confidence            445544   477889987  466777888888887644333555544332                              


Q ss_pred             hhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCc-cchHHHHHcCCeEEEe
Q 022360          181 IFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSV-RNIQAGKRVGLDTVLI  249 (298)
Q Consensus       181 ~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~p~~~i~iGDs~-~Di~~a~~aG~~~v~v  249 (298)
                                              .|.+...|..+++.-+++|...+.+||+. .|+.++++.|+.+.+.
T Consensus       156 ------------------------~KnSg~LFk~Vlk~EnVd~~~w~H~GDN~~aD~l~pk~LgI~Tlf~  201 (635)
T COG5610         156 ------------------------KKNSGNLFKAVLKLENVDPKKWIHCGDNWVADYLKPKNLGISTLFY  201 (635)
T ss_pred             ------------------------hcccchHHHHHHhhcCCChhheEEecCchhhhhcCccccchhHHHH
Confidence                                    57888999999999999999999999998 8999999999998764

>KOG2630 consensus Enolase-phosphatase E-1 [Amino acid transport and metabolism]

Probab=95.35  E-value=0.079  Score=46.60  Aligned_cols=114  Identities=16%  Similarity=0.205  Sum_probs=79.8

Q ss_pred             CCChhHHHHHHhC---CCcEEEEeCCChHHHHHHHHHhC---CCCccceeEeecCCCCCCCCCCCCChhhHHHHHhhhcc
Q 022360           99 KPDPVLRSLLLSL---PLRKIIFTNADKVHAVKVLSRLG---LEDCFEGIICFETLNPTHKNTVSDDEDDIAFVESAAST  172 (298)
Q Consensus        99 ~~~~g~~~~L~~l---~~~~~ivS~~~~~~~~~~l~~l~---l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  172 (298)
                      ..++++...++.-   +.+++|+|++...-++.++.+.+   +..|+++.                              
T Consensus       123 ~v~aDv~~a~e~w~~~g~~vyIYSSgsv~AqKllfg~s~~gdl~~y~~gy------------------------------  172 (254)
T KOG2630|consen  123 HVYADVLPAIERWSGEGVRVYIYSSGSVAAQKLLFGYSDAGDLRKYISGY------------------------------  172 (254)
T ss_pred             cccchhHHHHHHHhhcCceEEEEcCCcHHHHHHHHcccCcchHHHHhhhh------------------------------
Confidence            4577777777754   58899999998776666665442   22222222                              


Q ss_pred             cCCCCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHHcCCeEEEecCC
Q 022360          173 TTSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTVLIGKS  252 (298)
Q Consensus       173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a~~aG~~~v~v~~~  252 (298)
                                     |++ .-|          .|-....+..+.+..|.++.++++.-|..+-..+|+.+|+.+.++.++
T Consensus       173 ---------------fDt-~iG----------~K~e~~sy~~I~~~Ig~s~~eiLfLTd~~~Ea~aa~~aGl~a~l~~rP  226 (254)
T KOG2630|consen  173 ---------------FDT-TIG----------LKVESQSYKKIGHLIGKSPREILFLTDVPREAAAARKAGLQAGLVSRP  226 (254)
T ss_pred             ---------------hhc-ccc----------ceehhHHHHHHHHHhCCChhheEEeccChHHHHHHHhcccceeeeecC
Confidence                           221 111          577789999999999999999999999999999999999999887554


Q ss_pred             CC------CCCCCEEeCCHHHH
Q 022360          253 QR------VKGADYAFESIHNI  268 (298)
Q Consensus       253 ~~------~~~ad~i~~s~~~l  268 (298)
                      ..      ......++.++..|
T Consensus       227 gna~l~dd~~~~y~~i~~F~~l  248 (254)
T KOG2630|consen  227 GNAPLPDDAKVEYCVIWSFEIL  248 (254)
T ss_pred             CCCCCCcccccceeeeccchhh
Confidence            32      11124466666554

>KOG2469 consensus IMP-GMP specific 5'-nucleotidase [Nucleotide transport and metabolism]

Probab=94.78  E-value=0.19  Score=47.77  Aligned_cols=126  Identities=15%  Similarity=0.089  Sum_probs=73.0

Q ss_pred             HHHHHHhCCCcEEEEeCCChHHHHHHHHHh---CCCCccceeEeecCCCCCCCCCCCCChhhHHHHHhhhcccCCCCCCc
Q 022360          104 LRSLLLSLPLRKIIFTNADKVHAVKVLSRL---GLEDCFEGIICFETLNPTHKNTVSDDEDDIAFVESAASTTTSANGPQ  180 (298)
Q Consensus       104 ~~~~L~~l~~~~~ivS~~~~~~~~~~l~~l---~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  180 (298)
                      ....++..+.+..++||.+--+......+.   ++..+|+.+++...-.-+..+      +    ....++.+....   
T Consensus       206 ~l~~~r~sGKk~fl~Tns~~~ytd~~mt~~~~~dW~~yfd~v~~~a~Kp~ff~e------~----~vlreV~t~~g~---  272 (424)
T KOG2469|consen  206 LLSMLRDSGKKTFLHTNSDWDYTDIFMAFHYGFDWETYFDLVETRAAKPGFFHE------G----TVLREVEPQEGL---  272 (424)
T ss_pred             chHHHHhhccceEEeeccccchhhHHHHHHhCCCcceeEEEEEEeccCCccccc------c----ceeeeecccccc---
Confidence            555566677888899988776666555443   567789988876422110000      0    000000000000   


Q ss_pred             hhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCc-cchH-HHHHcCCeEEEecCCC
Q 022360          181 IFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSV-RNIQ-AGKRVGLDTVLIGKSQ  253 (298)
Q Consensus       181 ~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~p~~~i~iGDs~-~Di~-~a~~aG~~~v~v~~~~  253 (298)
                       + ..|+.-+|..         -.+.+++.....+++.++....+++++||+. .||. .-++-|+.++++....
T Consensus       273 -l-~~g~~~~p~e---------~~~~ySggs~~~~~~~l~~~g~diLy~gdHi~~dvl~skk~~~wrt~lv~peL  336 (424)
T KOG2469|consen  273 -L-KNGDNTGPLE---------QGGVYSGGSLKTVETSMKVKGKDILYGGDHIWGDVLVSKKRRGWRTVLVAPEL  336 (424)
T ss_pred             -c-cccccCCcch---------hcccCCcchHHHHHHHhcccccceeecccceeeeEEecceecceEEEEEehhh
Confidence             0 0111111111         1256667788888888999889999999999 5654 4566799998886544

>COG3769 Predicted hydrolase (HAD superfamily) [General function prediction only]

Probab=94.76  E-value=0.12  Score=45.41  Aligned_cols=38  Identities=16%  Similarity=-0.004  Sum_probs=25.1

Q ss_pred             CCCHHHHHHHHHHcCC-CCCc-EEEEcCCccchHHHHHcC
Q 022360          206 KPSELAIEKALKIASI-NPQR-TLFFEDSVRNIQAGKRVG  243 (298)
Q Consensus       206 kp~~~~~~~~l~~l~i-~p~~-~i~iGDs~~Di~~a~~aG  243 (298)
                      ..|..+...+++.+.. .+.+ ++.+||+.||+.+....-
T Consensus       190 ~gKg~Aa~~ll~~y~rl~~~r~t~~~GDg~nD~Pl~ev~d  229 (274)
T COG3769         190 AGKGQAANWLLETYRRLGGARTTLGLGDGPNDAPLLEVMD  229 (274)
T ss_pred             cCccHHHHHHHHHHHhcCceeEEEecCCCCCcccHHHhhh
Confidence            3444556666654432 3344 899999999999886544

>PLN02151 trehalose-phosphatase

Probab=93.82  E-value=0.26  Score=46.54  Aligned_cols=72  Identities=18%  Similarity=0.149  Sum_probs=55.5

Q ss_pred             CCCHHHHHHHHHHcCCCCC---cEEEEcCCccchHHHHHcCC----eEEEecCCCCCCCCCEEeCCHHHHHHHhHHhhc
Q 022360          206 KPSELAIEKALKIASINPQ---RTLFFEDSVRNIQAGKRVGL----DTVLIGKSQRVKGADYAFESIHNIKEAIPELWE  277 (298)
Q Consensus       206 kp~~~~~~~~l~~l~i~p~---~~i~iGDs~~Di~~a~~aG~----~~v~v~~~~~~~~ad~i~~s~~~l~~~l~~~~~  277 (298)
                      -.|..+++.+++.++....   -.+||||..+|-.+++.+.-    -.+.++.+.....|.|.+.+.+++.++|..+..
T Consensus       268 ~dKG~Av~~Ll~~~~~~~~~~~~pvyiGDD~TDEDaF~~L~~~~~G~gI~Vg~~~k~T~A~y~L~dp~eV~~~L~~L~~  346 (354)
T PLN02151        268 WDKGKALEFLLESLGYANCTDVFPIYIGDDRTDEDAFKILRDKKQGLGILVSKYAKETNASYSLQEPDEVMEFLERLVE  346 (354)
T ss_pred             CCHHHHHHHHHHhcccccCCCCeEEEEcCCCcHHHHHHHHhhcCCCccEEeccCCCCCcceEeCCCHHHHHHHHHHHHH
Confidence            4677999999999887533   28999999999988886521    134455444456899999999999999988764

>PLN03017 trehalose-phosphatase

Probab=93.69  E-value=0.38  Score=45.57  Aligned_cols=72  Identities=17%  Similarity=0.147  Sum_probs=56.4

Q ss_pred             CCCHHHHHHHHHHcCCCC---CcEEEEcCCccchHHHHHcC----CeEEEecCCCCCCCCCEEeCCHHHHHHHhHHhhc
Q 022360          206 KPSELAIEKALKIASINP---QRTLFFEDSVRNIQAGKRVG----LDTVLIGKSQRVKGADYAFESIHNIKEAIPELWE  277 (298)
Q Consensus       206 kp~~~~~~~~l~~l~i~p---~~~i~iGDs~~Di~~a~~aG----~~~v~v~~~~~~~~ad~i~~s~~~l~~~l~~~~~  277 (298)
                      -.|..+++.+++.++...   .-.+||||..+|-.+++.+.    --.|.|+.......|.|.+.+..++.++|.++..
T Consensus       282 ~dKG~Av~~LL~~l~~~~~~~~~pvyiGDD~TDEDaF~~L~~~~~G~gI~VG~~~k~T~A~y~L~dp~eV~~fL~~L~~  360 (366)
T PLN03017        282 WDKGKALEFLLESLGFGNTNNVFPVYIGDDRTDEDAFKMLRDRGEGFGILVSKFPKDTDASYSLQDPSEVMDFLARLVE  360 (366)
T ss_pred             CCHHHHHHHHHHhcccccCCCceEEEeCCCCccHHHHHHHhhcCCceEEEECCCCCCCcceEeCCCHHHHHHHHHHHHH
Confidence            466799999999998753   35899999999999988773    1245555434457799999999999999998854

>TIGR01689 EcbF-BcbF capsule biosynthesis phosphatase

Probab=93.22  E-value=0.12  Score=41.61  Aligned_cols=15  Identities=33%  Similarity=0.461  Sum_probs=13.2

Q ss_pred             cEEEEeCCCCccCCC
Q 022360           15 DCLLFDLDDTLYPYS   29 (298)
Q Consensus        15 k~viFDlDGTL~d~~   29 (298)
                      |+|+||+||||+...
T Consensus         2 K~i~~DiDGTL~~~~   16 (126)
T TIGR01689         2 KRLVMDLDNTITLTE   16 (126)
T ss_pred             CEEEEeCCCCcccCC
Confidence            799999999999753

Due to the likelihood that the substrates of these enzymes are different depending on the nature of the particular polysaccharides associated with each species, this model has been classified as a subfamily despite the close homology.

>TIGR01658 EYA-cons_domain eyes absent protein conserved domain

Probab=92.55  E-value=0.64  Score=41.45  Aligned_cols=46  Identities=11%  Similarity=-0.088  Sum_probs=40.8

Q ss_pred             CCCHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHHcCCeEEEecC
Q 022360          206 KPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTVLIGK  251 (298)
Q Consensus       206 kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a~~aG~~~v~v~~  251 (298)
                      ..|.+.|+++.+++|-+....++|||+..-=.+|+..+|+++-+..
T Consensus       213 vGK~~cFe~I~~Rfg~p~~~f~~IGDG~eEe~aAk~l~wPFw~I~~  258 (274)
T TIGR01658       213 VGKLQCFKWIKERFGHPKVRFCAIGDGWEECTAAQAMNWPFVKIDL  258 (274)
T ss_pred             cchHHHHHHHHHHhCCCCceEEEeCCChhHHHHHHhcCCCeEEeec
Confidence            4456999999999999788999999999999999999999996643

This domain is common to all eyes absent (EYA) homologs. Metazoan EYA's also contain a variable N-terminal domain consisting largely of low-complexity sequences.

>PF05822 UMPH-1: Pyrimidine 5'-nucleotidase (UMPH-1); InterPro: IPR006434 This family is a small group of metazoan sequences with sequences from Arabidopsis thaliana (Mouse-ear cress) and rice

Probab=92.14  E-value=0.35  Score=43.24  Aligned_cols=54  Identities=13%  Similarity=0.155  Sum_probs=36.3

Q ss_pred             CCCChhhHHHHhhcccCCCCCCCChhHHHHHHhC---CCcEEEEeCCChHHHHHHHHHhCC
Q 022360           78 YDFDYDDYHSFVHGRLPYENLKPDPVLRSLLLSL---PLRKIIFTNADKVHAVKVLSRLGL  135 (298)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~L~~l---~~~~~ivS~~~~~~~~~~l~~l~l  135 (298)
                      ..+....+.+.+.+    ..+.+.+|+.++++.|   ++++.|+|.+-...++.++++.+.
T Consensus        73 ~~l~k~~i~~~V~~----s~i~LRdg~~~~f~~L~~~~IP~lIFSAGlgdvI~~vL~q~~~  129 (246)
T PF05822_consen   73 QGLTKSEIEEAVKE----SDIMLRDGVEEFFDKLEEHNIPLLIFSAGLGDVIEEVLRQAGV  129 (246)
T ss_dssp             HT-BGGGHHHHHHC----S---B-BTHHHHHHHHHCTT--EEEEEEEEHHHHHHHHHHTT-
T ss_pred             cCcCHHHHHHHHHh----cchhhhcCHHHHHHHHHhcCCCEEEEeCCcHHHHHHHHHHcCC
Confidence            34446667766665    4567788888887776   488999999999999999998864

The sequences represent pyrimidine 5-nucleotidases, apparently in reference to HSPC233, the Homo sapiens (Human) homologue []. The structure of mouse sequence has been reported []. This group of sequences was originally found during searches for members of the haloacid dehalogenase (HAD) superfamily (IPR005834 from INTERPRO). All of the conserved catalytic motifs [] are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches of that subfamily (IA-ID) as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.; GO: 0000287 magnesium ion binding, 0008253 5'-nucleotidase activity, 0005737 cytoplasm; PDB: 2BDU_B 2G07_A 2G06_A 2G0A_A 2Q4T_A 2G09_A 2G08_A 2VKQ_A 2CN1_A 2JGA_A.

>COG2216 KdpB High-affinity K+ transport system, ATPase chain B [Inorganic ion transport and metabolism]

Probab=91.67  E-value=0.28  Score=48.09  Aligned_cols=88  Identities=10%  Similarity=0.205  Sum_probs=65.9

Q ss_pred             CChhHHHHHHhC---CCcEEEEeCCChHHHHHHHHHhCCCCccceeEeecCCCCCCCCCCCCChhhHHHHHhhhcccCCC
Q 022360          100 PDPVLRSLLLSL---PLRKIIFTNADKVHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSDDEDDIAFVESAASTTTSA  176 (298)
Q Consensus       100 ~~~g~~~~L~~l---~~~~~ivS~~~~~~~~~~l~~l~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  176 (298)
                      ..||+.+-+.+|   +++.+.+|+.++-....+....|+++|+..                                   
T Consensus       448 vK~Gi~ERf~elR~MgIkTvM~TGDN~~TAa~IA~EAGVDdfiAe-----------------------------------  492 (681)
T COG2216         448 VKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAAEAGVDDFIAE-----------------------------------  492 (681)
T ss_pred             cchhHHHHHHHHHhcCCeEEEEeCCCHHHHHHHHHHhCchhhhhc-----------------------------------
Confidence            357777665554   699999999999999999999999876421                                   


Q ss_pred             CCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHHcCCeEEEecCC
Q 022360          177 NGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTVLIGKS  252 (298)
Q Consensus       177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a~~aG~~~v~v~~~  252 (298)
                                                  ++|  +--..+.++.+-...=+.|.||+-||..+...+..+.+|-...
T Consensus       493 ----------------------------atP--EdK~~~I~~eQ~~grlVAMtGDGTNDAPALAqAdVg~AMNsGT  538 (681)
T COG2216         493 ----------------------------ATP--EDKLALIRQEQAEGRLVAMTGDGTNDAPALAQADVGVAMNSGT  538 (681)
T ss_pred             ----------------------------CCh--HHHHHHHHHHHhcCcEEEEcCCCCCcchhhhhcchhhhhcccc
Confidence                                        233  4444555555556666889999999999999888888876444

>KOG0204 consensus Calcium transporting ATPase [Inorganic ion transport and metabolism]

Probab=91.31  E-value=0.73  Score=47.77  Aligned_cols=159  Identities=9%  Similarity=0.038  Sum_probs=89.7

Q ss_pred             CCChhHHHHHHhC---CCcEEEEeCCChHHHHHHHHHhCCCCccceeEeecCCCCCCCCCCCC--ChhhHHHHHhhhccc
Q 022360           99 KPDPVLRSLLLSL---PLRKIIFTNADKVHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSD--DEDDIAFVESAASTT  173 (298)
Q Consensus        99 ~~~~g~~~~L~~l---~~~~~ivS~~~~~~~~~~l~~l~l~~~f~~i~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~  173 (298)
                      +..||+.+.++.+   ++.+-.+|+.+...++.+....|+..-=+.      .....|..|-.  +++-.+.+....+..
T Consensus       647 PvRPgV~~AV~~Cq~AGItVRMVTGDNI~TAkAIA~eCGILt~~~d------~~~lEG~eFr~~s~ee~~~i~pkl~VlA  720 (1034)
T KOG0204|consen  647 PVRPGVPEAVQLCQRAGITVRMVTGDNINTAKAIARECGILTPGGD------FLALEGKEFRELSQEERDKIWPKLRVLA  720 (1034)
T ss_pred             CCCCCcHHHHHHHHHcCcEEEEEeCCcHHHHHHHHHHcccccCCCc------cceecchhhhhcCHHHHHhhhhhheeee
Confidence            3468888888776   477889999999999999999987432111      11122222211  122222222222222


Q ss_pred             CCCCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHHcCCeEEEec--C
Q 022360          174 TSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTVLIG--K  251 (298)
Q Consensus       174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a~~aG~~~v~v~--~  251 (298)
                      .+..                            -.|-...+.+ .+.   .+=+.+-||+.||-.+.+.|.++.+|.-  .
T Consensus       721 RSSP----------------------------~DK~lLVk~L-~~~---g~VVAVTGDGTNDaPALkeADVGlAMGIaGT  768 (1034)
T KOG0204|consen  721 RSSP----------------------------NDKHLLVKGL-IKQ---GEVVAVTGDGTNDAPALKEADVGLAMGIAGT  768 (1034)
T ss_pred             cCCC----------------------------chHHHHHHHH-Hhc---CcEEEEecCCCCCchhhhhcccchhccccch
Confidence            1111                            1111222222 222   2235577999999999999999999873  3


Q ss_pred             CCCCCCCCEEeCCHHHHHHHhHH-hhccCcccccCCCceeeeeecc
Q 022360          252 SQRVKGADYAFESIHNIKEAIPE-LWESDMKSEVGYPGQVAVETSV  296 (298)
Q Consensus       252 ~~~~~~ad~i~~s~~~l~~~l~~-~~~~~~~~~~~~~~~~~~~~~~  296 (298)
                      .-+++.+|.++.+ +++..+... .|++.--.....--|+..+-.|
T Consensus       769 eVAKEaSDIIi~D-DNFssIVk~v~WGR~VY~nIqKFiQFQLTVNV  813 (1034)
T KOG0204|consen  769 EVAKEASDIIILD-DNFSSIVKAVKWGRNVYDNIQKFLQFQLTVNV  813 (1034)
T ss_pred             hhhhhhCCeEEEc-CchHHHHHHHHhhhHHHHHHHHhheeEEEEEE
Confidence            4468999999876 555555544 3665433333333344443333

>TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB

Probab=91.09  E-value=0.2  Score=42.91  Aligned_cols=27  Identities=26%  Similarity=0.395  Sum_probs=20.7

Q ss_pred             EEEEeCCCCccCCC-ccHHHHHHHHHHH
Q 022360           16 CLLFDLDDTLYPYS-SGIAAACGQNIKD   42 (298)
Q Consensus        16 ~viFDlDGTL~d~~-~~~~~~~~~~~~~   42 (298)
                      +|+||+||||++.. ..+.....+++.+
T Consensus         1 li~~D~DgTL~~~~~~~~~~~~~~~l~~   28 (204)
T TIGR01484         1 LLFFDLDGTLLDPNAHELSPETIEALER   28 (204)
T ss_pred             CEEEeCcCCCcCCCCCcCCHHHHHHHHH
Confidence            47899999999865 4566666666666

The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear.

>PLN03190 aminophospholipid translocase; Provisional

Probab=91.02  E-value=0.25  Score=53.87  Aligned_cols=67  Identities=15%  Similarity=0.226  Sum_probs=46.3

Q ss_pred             CCCCHHHHHHHHHHcCCC-CCcEEEEcCCccchHHHHHcCCeEEEecC-C--CCCCCCCEEeCCHHHHHHHh
Q 022360          205 CKPSELAIEKALKIASIN-PQRTLFFEDSVRNIQAGKRVGLDTVLIGK-S--QRVKGADYAFESIHNIKEAI  272 (298)
Q Consensus       205 ~kp~~~~~~~~l~~l~i~-p~~~i~iGDs~~Di~~a~~aG~~~v~v~~-~--~~~~~ad~i~~s~~~l~~~l  272 (298)
                      ++-.|.--..+.+.+.-. +.-|++|||+.||+.|.+.|.+++ ++.. .  .+...+|+.+..++.|...|
T Consensus       852 cR~sP~QKa~IV~~vk~~~~~vtlaIGDGaNDv~mIq~AdVGI-GIsG~EG~qA~~aSDfaI~~Fr~L~rLL  922 (1178)
T PLN03190        852 CRVAPLQKAGIVALVKNRTSDMTLAIGDGANDVSMIQMADVGV-GISGQEGRQAVMASDFAMGQFRFLVPLL  922 (1178)
T ss_pred             ecCCHHHHHHHHHHHHhcCCcEEEEECCCcchHHHHHhcCeee-eecCchhHHHHHhhccchhhhHHHHHHH
Confidence            344444444444433321 345899999999999999998776 3332 2  25788999999999988766

>KOG2470 consensus Similar to IMP-GMP specific 5'-nucleotidase [Nucleotide transport and metabolism]

Probab=90.85  E-value=0.41  Score=44.71  Aligned_cols=122  Identities=20%  Similarity=0.200  Sum_probs=72.3

Q ss_pred             CChhHHHHHHhCC---CcEEEEeCCChHHHHHHHHHh---CCCCccceeEeecCCCCCCCCCCCCCh----hhHHHHHhh
Q 022360          100 PDPVLRSLLLSLP---LRKIIFTNADKVHAVKVLSRL---GLEDCFEGIICFETLNPTHKNTVSDDE----DDIAFVESA  169 (298)
Q Consensus       100 ~~~g~~~~L~~l~---~~~~ivS~~~~~~~~~~l~~l---~l~~~f~~i~~~~~~~~~~~~~~~~~~----~~~~~~~~~  169 (298)
                      ..|.+..+|++|+   .++.++||++-..+..-++.+   ++.++||.++..-+-..+    +.|..    -+.++-.+.
T Consensus       241 r~~ql~~fl~kL~~~GKklFLiTNSPysFVd~GM~flvG~~WRdlFDVVIvqA~KP~F----ftde~rPfR~~dek~~sl  316 (510)
T KOG2470|consen  241 RNPQLLAFLRKLKDHGKKLFLITNSPYSFVDKGMRFLVGDDWRDLFDVVIVQANKPEF----FTDERRPFRKYDEKRGSL  316 (510)
T ss_pred             ccHHHHHHHHHHHHhcCcEEEEeCCchhhhhcCceeeeCccHHhhhheeEEecCCCcc----cccccCcchhhcccccch
Confidence            3467777777774   779999999999888766655   355688888765322210    11110    000110001


Q ss_pred             hcccCCCCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCc-cchHHHH-HcCCeEE
Q 022360          170 ASTTTSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSV-RNIQAGK-RVGLDTV  247 (298)
Q Consensus       170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~p~~~i~iGDs~-~Di~~a~-~aG~~~v  247 (298)
                      .-.+..+                     +.||.+.-.   -.+...++.-++...++++|||.. +|+.... ..||.+.
T Consensus       317 ~wdkv~k---------------------lekgkiYy~---G~l~~flelt~WrG~~VlYFGDHlySDLad~tlkhgWRTg  372 (510)
T KOG2470|consen  317 LWDKVDK---------------------LEKGKIYYQ---GNLKSFLELTGWRGPRVLYFGDHLYSDLADLTLKHGWRTG  372 (510)
T ss_pred             hhhhhhh---------------------cccCceeee---ccHHHHHHHhccCCCeeEEecCcchhhhhhhHhhcccccc
Confidence            1000000                     111111111   346777888899999999999998 8988776 8899876


Q ss_pred             Ee
Q 022360          248 LI  249 (298)
Q Consensus       248 ~v  249 (298)
                      .+
T Consensus       373 AI  374 (510)
T KOG2470|consen  373 AI  374 (510)
T ss_pred             cc
Confidence            55

>TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family

Probab=89.95  E-value=1.4  Score=39.96  Aligned_cols=49  Identities=20%  Similarity=0.219  Sum_probs=32.7

Q ss_pred             CCCCChhHHHHHHhCC---CcEEEEeCCC---hHHHHHHHHHhCCCCccceeEee
Q 022360           97 NLKPDPVLRSLLLSLP---LRKIIFTNAD---KVHAVKVLSRLGLEDCFEGIICF  145 (298)
Q Consensus        97 ~~~~~~g~~~~L~~l~---~~~~ivS~~~---~~~~~~~l~~l~l~~~f~~i~~~  145 (298)
                      ...+.||+.++|+.|+   .+++++||..   .......++.+|+..-.+.++++
T Consensus        16 ~~~~~~ga~e~l~~L~~~g~~~~~~Tnns~~~~~~~~~~l~~~G~~~~~~~i~ts   70 (279)
T TIGR01452        16 GERVVPGAPELLDRLARAGKAALFVTNNSTKSRAEYALKFARLGFNGLAEQLFSS   70 (279)
T ss_pred             CCeeCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCCChhhEecH
Confidence            3457788888888774   7789999854   33444566778875444555543

This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association.

>KOG0210 consensus P-type ATPase [Inorganic ion transport and metabolism]

Probab=89.59  E-value=0.94  Score=46.07  Aligned_cols=61  Identities=13%  Similarity=0.221  Sum_probs=41.8

Q ss_pred             HHHHHHHHHHcCCCCCcEEEEcCCccchHHHHHcCCeEEEecC--CCCCCCCCEEeCCHHHHHHHh
Q 022360          209 ELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTVLIGK--SQRVKGADYAFESIHNIKEAI  272 (298)
Q Consensus       209 ~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a~~aG~~~v~v~~--~~~~~~ad~i~~s~~~l~~~l  272 (298)
                      +++.+.+.++-+   .++-+|||+.||+.|.+.|..+.-.++.  ..+.-.||+-+..+..+.+.|
T Consensus       770 A~v~~llq~~t~---krvc~IGDGGNDVsMIq~A~~GiGI~gkEGkQASLAADfSItqF~Hv~rLL  832 (1051)
T KOG0210|consen  770 AQVVRLLQKKTG---KRVCAIGDGGNDVSMIQAADVGIGIVGKEGKQASLAADFSITQFSHVSRLL  832 (1051)
T ss_pred             HHHHHHHHHhhC---ceEEEEcCCCccchheeecccceeeecccccccchhccccHHHHHHHHHHh
Confidence            455555555444   6788999999999999888655443433  234567888877777766654

>TIGR02468 sucrsPsyn_pln sucrose phosphate synthase/possible sucrose phosphate phosphatase, plant

Probab=89.58  E-value=2.7  Score=45.10  Aligned_cols=40  Identities=15%  Similarity=0.088  Sum_probs=34.1

Q ss_pred             CCCCHHHHHHHHHHcCCCCCcE-EEEcCCcc-chHHHHHcCCe
Q 022360          205 CKPSELAIEKALKIASINPQRT-LFFEDSVR-NIQAGKRVGLD  245 (298)
Q Consensus       205 ~kp~~~~~~~~l~~l~i~p~~~-i~iGDs~~-Di~~a~~aG~~  245 (298)
                      ...|.++++++..++|++.+++ +++||+.| |++... .|..
T Consensus       954 ~ASKgqAlRyL~~rwgi~l~~v~VfaGdSGntD~e~Ll-~G~~  995 (1050)
T TIGR02468       954 LASRSQALRYLFVRWGIELANMAVFVGESGDTDYEGLL-GGLH  995 (1050)
T ss_pred             CCCHHHHHHHHHHHcCCChHHeEEEeccCCCCCHHHHh-CCce
Confidence            5888999999999999999999 55999998 988773 3544

Members of this family are sucrose-phosphate synthases of plants. This enzyme is known to exist in multigene families in several species of both monocots and dicots. The N-terminal domain is the glucosyltransferase domain. Members of this family also have a variable linker region and a C-terminal domain that resembles sucrose phosphate phosphatase (SPP) (EC 3.1.3.24) (see TIGR01485), the next and final enzyme of sucrose biosynthesis. The SPP-like domain likely serves a binding and not a catalytic function, as the reported SPP is always encoded by a distinct protein.

>KOG2961 consensus Predicted hydrolase (HAD superfamily) [General function prediction only]

Probab=89.14  E-value=0.62  Score=38.59  Aligned_cols=49  Identities=10%  Similarity=0.109  Sum_probs=36.5

Q ss_pred             CCCCHHHHHHHHHH-cC----CCCCcEEEEcCCc-cchHHHHHcCCeEEEecCCC
Q 022360          205 CKPSELAIEKALKI-AS----INPQRTLFFEDSV-RNIQAGKRVGLDTVLIGKSQ  253 (298)
Q Consensus       205 ~kp~~~~~~~~l~~-l~----i~p~~~i~iGDs~-~Di~~a~~aG~~~v~v~~~~  253 (298)
                      .+-||..-..+++. ++    ..+++++||||.+ +||.+|+..|.-.+|...+-
T Consensus       116 s~kKP~ct~E~~~y~~~Nshv~~~se~~~vGDRlfTDI~~aN~mGs~gVw~~~gv  170 (190)
T KOG2961|consen  116 SVKKPACTAEEVEYHFGNSHVCTSSELIMVGDRLFTDIVYANRMGSLGVWTEPGV  170 (190)
T ss_pred             cccCCCccHHHHHHHhCCcccCChhHeEEEccchhhhHhhhhhccceeEEecccc
Confidence            34444444444443 33    4789999999999 99999999999999886654

>COG0647 NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism]

Probab=85.84  E-value=4.1  Score=37.02  Aligned_cols=155  Identities=15%  Similarity=0.124  Sum_probs=85.6

Q ss_pred             CCCCCCChhHHHHHHhCC---CcEEEEeCCChHHHH---HHHHH-hCCCCccceeEeecCCCCCCCCCCCCChhhHHHHH
Q 022360           95 YENLKPDPVLRSLLLSLP---LRKIIFTNADKVHAV---KVLSR-LGLEDCFEGIICFETLNPTHKNTVSDDEDDIAFVE  167 (298)
Q Consensus        95 ~~~~~~~~g~~~~L~~l~---~~~~ivS~~~~~~~~---~~l~~-l~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~  167 (298)
                      +....++||+.++|+.|+   .+++++||++...-+   ..++. .+++--.+.++++.....          ++++.  
T Consensus        20 ~~G~~~ipga~e~l~~L~~~g~~~iflTNn~~~s~~~~~~~L~~~~~~~~~~~~i~TS~~at~----------~~l~~--   87 (269)
T COG0647          20 YRGNEAIPGAAEALKRLKAAGKPVIFLTNNSTRSREVVAARLSSLGGVDVTPDDIVTSGDATA----------DYLAK--   87 (269)
T ss_pred             EeCCccCchHHHHHHHHHHcCCeEEEEeCCCCCCHHHHHHHHHhhcCCCCCHHHeecHHHHHH----------HHHHh--
Confidence            467889999999999774   789999997555433   34444 455556677887754332          11111  


Q ss_pred             hhhcccCCCCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCC------CC--CcEEEEcCCc----cc
Q 022360          168 SAASTTTSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASI------NP--QRTLFFEDSV----RN  235 (298)
Q Consensus       168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i------~p--~~~i~iGDs~----~D  235 (298)
                             ......++-+                    +   ...+...++.+|+      ++  -.++.+|...    .+
T Consensus        88 -------~~~~~kv~vi--------------------G---~~~l~~~l~~~G~~~~~~~~~~~~d~Vv~g~d~~~~~e~  137 (269)
T COG0647          88 -------QKPGKKVYVI--------------------G---EEGLKEELEGAGFELVDEEEPARVDAVVVGLDRTLTYEK  137 (269)
T ss_pred             -------hCCCCEEEEE--------------------C---CcchHHHHHhCCcEEeccCCCCcccEEEEecCCCCCHHH
Confidence                   0000111100                    1   2456677777774      12  1366677665    22


Q ss_pred             ---hHHHHHcCCeEEEecCCCCCCCCCEEeCCHHHHHHHhHHhhccCcccccCCCceeee
Q 022360          236 ---IQAGKRVGLDTVLIGKSQRVKGADYAFESIHNIKEAIPELWESDMKSEVGYPGQVAV  292 (298)
Q Consensus       236 ---i~~a~~aG~~~v~v~~~~~~~~ad~i~~s~~~l~~~l~~~~~~~~~~~~~~~~~~~~  292 (298)
                         ..-+...|+.++.-+........+-....--.+...+++.-+... .-+|.|.+...
T Consensus       138 l~~a~~~i~~g~~fI~tNpD~~~p~~~g~~pgaGai~~~~~~~tg~~~-~~~GKP~~~i~  196 (269)
T COG0647         138 LAEALLAIAAGAPFIATNPDLTVPTERGLRPGAGAIAALLEQATGREP-TVIGKPSPAIY  196 (269)
T ss_pred             HHHHHHHHHcCCcEEEeCCCccccCCCCCccCcHHHHHHHHHhhCCcc-cccCCCCHHHH
Confidence               222344466666555544443444444555566677776655444 46677665443

>PF08235 LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 This domain is found in Saccharomyces cerevisiae (Baker's yeast) protein SMP2, proteins with an N-terminal lipin domain (IPR007651 from INTERPRO) and phosphatidylinositol transfer proteins []

Probab=83.88  E-value=6.9  Score=32.64  Aligned_cols=21  Identities=24%  Similarity=0.245  Sum_probs=18.8

Q ss_pred             EEEEcCCccchHHHHHcCCeE
Q 022360          226 TLFFEDSVRNIQAGKRVGLDT  246 (298)
Q Consensus       226 ~i~iGDs~~Di~~a~~aG~~~  246 (298)
                      ...||.+.+|+.+-+++|+..
T Consensus       122 ~agfGN~~tDv~aY~~vGip~  142 (157)
T PF08235_consen  122 YAGFGNRSTDVIAYKAVGIPK  142 (157)
T ss_pred             EEecCCcHHHHHHHHHcCCCh
Confidence            568999999999999999883

SMP2 is involved in plasmid maintenance and respiration []. Lipin proteins are involved in adipose tissue development and insulin resistance [].

>PF06189 5-nucleotidase: 5'-nucleotidase; InterPro: IPR010394 This family consists of both eukaryotic and prokaryotic 5'-nucleotidase sequences (3

Probab=82.76  E-value=6.7  Score=35.39  Aligned_cols=40  Identities=13%  Similarity=0.236  Sum_probs=30.3

Q ss_pred             CCCCHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHHcCCeEEEecCCC
Q 022360          205 CKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTVLIGKSQ  253 (298)
Q Consensus       205 ~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a~~aG~~~v~v~~~~  253 (298)
                      +-+|..+++.+      .|  =|+|+|....++.|. .++.++.|.++.
T Consensus       222 G~~K~~vL~~~------~p--hIFFDDQ~~H~~~a~-~~vps~hVP~gv  261 (264)
T PF06189_consen  222 GLPKGPVLKAF------RP--HIFFDDQDGHLESAS-KVVPSGHVPYGV  261 (264)
T ss_pred             CCchhHHHHhh------CC--CEeecCchhhhhHhh-cCCCEEeccCCc
Confidence            56666665543      23  479999999999998 788899887764

1.3.5 from EC).; GO: 0000166 nucleotide binding, 0000287 magnesium ion binding, 0008253 5'-nucleotidase activity, 0009117 nucleotide metabolic process, 0005737 cytoplasm

>KOG3107 consensus Predicted haloacid dehalogenase-like hydrolase (eyes absent) [General function prediction only]

Probab=82.74  E-value=14  Score=35.16  Aligned_cols=43  Identities=19%  Similarity=0.075  Sum_probs=37.4

Q ss_pred             CCCHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHHcCCeEEEe
Q 022360          206 KPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTVLI  249 (298)
Q Consensus       206 kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a~~aG~~~v~v  249 (298)
                      -.|...|++|.+++|- ....++|||+...-.+|++..|++.-+
T Consensus       408 iGKescFerI~~RFg~-K~~yvvIgdG~eee~aAK~ln~PfwrI  450 (468)
T KOG3107|consen  408 IGKESCFERIQSRFGR-KVVYVVIGDGVEEEQAAKALNMPFWRI  450 (468)
T ss_pred             ccHHHHHHHHHHHhCC-ceEEEEecCcHHHHHHHHhhCCceEee
Confidence            3445899999999997 678899999999999999999999854

>PLN02580 trehalose-phosphatase

Probab=82.73  E-value=2.3  Score=40.72  Aligned_cols=35  Identities=9%  Similarity=0.145  Sum_probs=25.7

Q ss_pred             CCCChhHHHHHHhCC--CcEEEEeCCChHHHHHHHHH
Q 022360           98 LKPDPVLRSLLLSLP--LRKIIFTNADKVHAVKVLSR  132 (298)
Q Consensus        98 ~~~~~g~~~~L~~l~--~~~~ivS~~~~~~~~~~l~~  132 (298)
                      ..+.|++.+.|+.|.  .+++|+|+.+...+...+.-
T Consensus       140 A~~s~~~~~aL~~La~~~~VAIVSGR~~~~L~~~l~~  176 (384)
T PLN02580        140 ALMSDAMRSAVKNVAKYFPTAIISGRSRDKVYELVGL  176 (384)
T ss_pred             ccCCHHHHHHHHHHhhCCCEEEEeCCCHHHHHHHhCC
Confidence            345567777777773  56999999988877776653

>KOG1605 consensus TFIIF-interacting CTD phosphatase, including NLI-interacting factor (involved in RNA polymerase II regulation) [Transcription]

Probab=80.72  E-value=0.085  Score=47.65  Aligned_cols=48  Identities=17%  Similarity=0.214  Sum_probs=37.3

Q ss_pred             CCCChhHHHHHHhCC--CcEEEEeCCChHHHHHHHHHhCC-CCccceeEee
Q 022360           98 LKPDPVLRSLLLSLP--LRKIIFTNADKVHAVKVLSRLGL-EDCFEGIICF  145 (298)
Q Consensus        98 ~~~~~g~~~~L~~l~--~~~~ivS~~~~~~~~~~l~~l~l-~~~f~~i~~~  145 (298)
                      +.-.|++.++|+...  +.+++.|.+...+..+++..+.- ...|...+..
T Consensus       130 V~kRP~vdeFL~~~s~~~e~v~FTAs~~~Ya~~v~D~LD~~~~i~~~RlyR  180 (262)
T KOG1605|consen  130 VRKRPHVDEFLSRVSKWYELVLFTASLEVYADPLLDILDPDRKIISHRLYR  180 (262)
T ss_pred             EEcCCCHHHHHHHhHHHHHHHHHHhhhHHHHHHHHHHccCCCCeeeeeecc
Confidence            456799999999987  67889999999999999998864 4444444433

>KOG0209 consensus P-type ATPase [Inorganic ion transport and metabolism]

Probab=80.02  E-value=2.6  Score=43.86  Aligned_cols=45  Identities=16%  Similarity=0.114  Sum_probs=34.7

Q ss_pred             HHHHHHHHHHcCCCCCcEEEEcCCccchHHHHHcCCeEEEecCCC
Q 022360          209 ELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTVLIGKSQ  253 (298)
Q Consensus       209 ~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a~~aG~~~v~v~~~~  253 (298)
                      |.--+.++..+.--..-++|.||+-||+-+.+.|..++++.+.+.
T Consensus       792 P~QKE~ii~tlK~~Gy~TLMCGDGTNDVGALK~AhVGVALL~~~~  836 (1160)
T KOG0209|consen  792 PKQKEFIITTLKKLGYVTLMCGDGTNDVGALKQAHVGVALLNNPE  836 (1160)
T ss_pred             hhhHHHHHHHHHhcCeEEEEecCCCcchhhhhhcccceehhcCCh
Confidence            344455555555555679999999999999999999999886654

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	298
3nuq_A	282	Structure Of A Putative Nucleotide Phosphatase From		5e-10
3onn_A	263	Crystal Structure Of 5'-Nucleotidase Sdt1 From Sacc		5e-10
3opx_A	263	Crystal Structure Of Pyrimidine 5 -Nucleotidase Sdt		4e-09

>pdb|3NUQ|A Chain A, Structure Of A Putative Nucleotide Phosphatase From Saccharomyces Cerevisiae Length = 282

Iteration: 1
 Score = 61.6 bits (148), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 59/239 (24%), Positives = 96/239 (40%), Gaps = 58/239 (24%)
Query: 17  LLFDLDDTLYPYSSGIAAACGQNIKDYMVEKLGIERSKIEDLGNLLYKNYGTTMAGLRAI 76
             FD+D+ LY  S+ I     Q+I  +    L +       L N  YK YG  + GL  +
Sbjct: 60  FFFDIDNCLYKSSTRIHDLMQQSILRFFQTHLKLSPEDAHVLNNSYYKEYGLAIRGL-VM 118
Query: 77  GYDFDYDDYHSFVHGRLPYEN-LKPD-PVXXXXXXXXXXXKI----IFTNADKVHAVKVL 130
            +  +  +Y+  V   LP ++ LKPD P+           KI    +FTNA K HA++ L
Sbjct: 119 FHKVNALEYNRLVDDSLPLQDILKPDIPLRNMLLRLRQSGKIDKLWLFTNAYKNHAIRCL 178
Query: 131 SRLGLEDCFEGIICFETLNPTHKNTVSDDEDDIAFVESAASTTTSANGPQIFDIIGHFAQ 190
             LG+ D F+G                     + + + + + T                 
Sbjct: 179 RLLGIADLFDG---------------------LTYCDYSRTDT----------------- 200
Query: 191 PNPSLVALPKTPIACKPSELAIEKALKIASI-NPQRTLFFEDSVRNIQAGKRVGLDTVL 248
                       + CKP   A EKA+K + +   +   F +DS +NI+ G ++G+ T +
Sbjct: 201 ------------LVCKPHVKAFEKAMKESGLARYENAYFIDDSGKNIETGIKLGMKTCI 247

>pdb|3ONN|A Chain A, Crystal Structure Of 5'-Nucleotidase Sdt1 From Saccharomyces Cerevisiae Length = 263

Iteration: 1
 Score = 61.6 bits (148), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 59/239 (24%), Positives = 96/239 (40%), Gaps = 58/239 (24%)
Query: 17  LLFDLDDTLYPYSSGIAAACGQNIKDYMVEKLGIERSKIEDLGNLLYKNYGTTMAGLRAI 76
             FD+D+ LY  S+ I     Q+I  +    L +       L N  YK YG  + GL  +
Sbjct: 33  FFFDIDNCLYKSSTRIHDLMQQSILRFFQTHLKLSPEDAHVLNNSYYKEYGLAIRGL-VM 91
Query: 77  GYDFDYDDYHSFVHGRLPYEN-LKPD-PVXXXXXXXXXXXKI----IFTNADKVHAVKVL 130
            +  +  +Y+  V   LP ++ LKPD P+           KI    +FTNA K HA++ L
Sbjct: 92  FHKVNALEYNRLVDDSLPLQDILKPDIPLRNMLLRLRQSGKIDKLWLFTNAYKNHAIRCL 151
Query: 131 SRLGLEDCFEGIICFETLNPTHKNTVSDDEDDIAFVESAASTTTSANGPQIFDIIGHFAQ 190
             LG+ D F+G                     + + + + + T                 
Sbjct: 152 RLLGIADLFDG---------------------LTYCDYSRTDT----------------- 173
Query: 191 PNPSLVALPKTPIACKPSELAIEKALKIASI-NPQRTLFFEDSVRNIQAGKRVGLDTVL 248
                       + CKP   A EKA+K + +   +   F +DS +NI+ G ++G+ T +
Sbjct: 174 ------------LVCKPHVKAFEKAMKESGLARYENAYFIDDSGKNIETGIKLGMKTCI 220

>pdb|3OPX|A Chain A, Crystal Structure Of Pyrimidine 5 -Nucleotidase Sdt1 From Saccharomyces Cerevisiae Complexed With Uridine 5'-Monophosphate Length = 263

Iteration: 1
 Score = 58.5 bits (140), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 58/239 (24%), Positives = 95/239 (39%), Gaps = 58/239 (24%)
Query: 17  LLFDLDDTLYPYSSGIAAACGQNIKDYMVEKLGIERSKIEDLGNLLYKNYGTTMAGLRAI 76
             F +D+ LY  S+ I     Q+I  +    L +       L N  YK YG  + GL  +
Sbjct: 33  FFFAIDNCLYKSSTRIHDLMQQSILRFFQTHLKLSPEDAHVLNNSYYKEYGLAIRGL-VM 91
Query: 77  GYDFDYDDYHSFVHGRLPYEN-LKPD-PVXXXXXXXXXXXKI----IFTNADKVHAVKVL 130
            +  +  +Y+  V   LP ++ LKPD P+           KI    +FTNA K HA++ L
Sbjct: 92  FHKVNALEYNRLVDDSLPLQDILKPDIPLRNMLLRLRQSGKIDKLWLFTNAYKNHAIRCL 151
Query: 131 SRLGLEDCFEGIICFETLNPTHKNTVSDDEDDIAFVESAASTTTSANGPQIFDIIGHFAQ 190
             LG+ D F+G                     + + + + + T                 
Sbjct: 152 RLLGIADLFDG---------------------LTYCDYSRTDT----------------- 173
Query: 191 PNPSLVALPKTPIACKPSELAIEKALKIASI-NPQRTLFFEDSVRNIQAGKRVGLDTVL 248
                       + CKP   A EKA+K + +   +   F +DS +NI+ G ++G+ T +
Sbjct: 174 ------------LVCKPHVKAFEKAMKESGLARYENAYFIDDSGKNIETGIKLGMKTCI 220

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	298
3nuq_A	282	Protein SSM1, putative nucleotide phosphatase; sup	1e-42
2hoq_A	241	Putative HAD-hydrolase PH1655; haloacid dehalogena	9e-14
1qyi_A	384	ZR25, hypothetical protein; structural genomics, P	2e-12
2gfh_A	260	Haloacid dehalogenase-like hydrolase domain conta;	4e-11
2om6_A	235	Probable phosphoserine phosphatase; rossmann fold,	5e-11
2pke_A	251	Haloacid delahogenase-like family hydrolase; NP_63	2e-10
3kzx_A	231	HAD-superfamily hydrolase, subfamily IA, variant;	1e-09
2zg6_A	220	Putative uncharacterized protein ST2620, probable	1e-09
3u26_A	234	PF00702 domain protein; structural genomics, PSI-b	3e-09
3ed5_A	238	YFNB; APC60080, bacillus subtilis subsp. subtilis	9e-09
3cnh_A	200	Hydrolase family protein; NP_295428.1, predicted h	2e-08
3qnm_A	240	Haloacid dehalogenase-like hydrolase; structural g	7e-08
2fdr_A	229	Conserved hypothetical protein; SAD, structural ge	2e-07
2wf7_A	221	Beta-PGM, beta-phosphoglucomutase; transition stat	7e-07
3s6j_A	233	Hydrolase, haloacid dehalogenase-like family; stru	7e-07
3mc1_A	226	Predicted phosphatase, HAD family; PSI2, NYSGXRC,	8e-07
3ddh_A	234	Putative haloacid dehalogenase-like family hydrol;	3e-06
3d6j_A	225	Putative haloacid dehalogenase-like hydrolase; str	3e-06
3nas_A	233	Beta-PGM, beta-phosphoglucomutase; PSI, structural	4e-06
4dcc_A	229	Putative haloacid dehalogenase-like hydrolase; mag	6e-06
2hdo_A	209	Phosphoglycolate phosphatase; NP_784602.1, structu	7e-06
2fi1_A	190	Hydrolase, haloacid dehalogenase-like family; stru	1e-05
2pr7_A	137	Haloacid dehalogenase/epoxide hydrolase family; NP	2e-05
3smv_A	240	S-(-)-azetidine-2-carboxylate hydrolase; haloacid	4e-05
2i6x_A	211	Hydrolase, haloacid dehalogenase-like family; HAD	5e-05
2nyv_A	222	Pgpase, PGP, phosphoglycolate phosphatase; structu	7e-05
2b0c_A	206	Putative phosphatase; alpha-D-glucose-1-phosphate,	7e-05
2hi0_A	240	Putative phosphoglycolate phosphatase; YP_619066.1	1e-04
3m9l_A	205	Hydrolase, haloacid dehalogenase-like family; HAD	1e-04
3qxg_A	243	Inorganic pyrophosphatase; hydrolase, magnesium bi	1e-04
2hsz_A	243	Novel predicted phosphatase; structural genomics,	1e-04
3sd7_A	240	Putative phosphatase; structural genomics, haloaci	1e-04
2go7_A	207	Hydrolase, haloacid dehalogenase-like family; stru	2e-04
2p11_A	231	Hypothetical protein; putative haloacid dehalogena	2e-04
3k1z_A	263	Haloacid dehalogenase-like hydrolase domain-conta	2e-04
3e58_A	214	Putative beta-phosphoglucomutase; structu genomics	4e-04
3dv9_A	247	Beta-phosphoglucomutase; structural genomics, APC6	6e-04
3ib6_A	189	Uncharacterized protein; structural genomics, unkn	7e-04
4eek_A	259	Beta-phosphoglucomutase-related protein; hydrolase	8e-04

>3nuq_A Protein SSM1, putative nucleotide phosphatase; suppresses the 6-AU sensitivity of transcription elongation II; 1.70A {Saccharomyces cerevisiae} PDB: 3onn_A 3opx_A* Length = 282

 Score =  147 bits (371), Expect = 1e-42
 Identities = 61/279 (21%), Positives = 102/279 (36%), Gaps = 65/279 (23%)

Query: 12  AKYDCLLFDLDDTLYPYSSGIAAACGQNIKDYMVEKLGIERSKIEDLGNLLYKNYGTTMA 71
                  FD+D+ LY  S+ I     Q+I  +    L +       L N  YK YG  + 
Sbjct: 55  PNLKVFFFDIDNCLYKSSTRIHDLMQQSILRFFQTHLKLSPEDAHVLNNSYYKEYGLAIR 114

Query: 72  GLRAIGYDFDYDDYHSFVHGRLPYEN-LKPDPVLRSLLLSLPL-----RKIIFTNADKVH 125
           G   + +  +  +Y+  V   LP ++ LKPD  LR++LL L       +  +FTNA K H
Sbjct: 115 G-LVMFHKVNALEYNRLVDDSLPLQDILKPDIPLRNMLLRLRQSGKIDKLWLFTNAYKNH 173

Query: 126 AVKVLSRLGLEDCFEGIICFETLNPTHKNTVSDDEDDIAFVESAASTTTSANGPQIFDII 185
           A++ L  LG+ D F+G+   +                                       
Sbjct: 174 AIRCLRLLGIADLFDGLTYCDYSRTDT--------------------------------- 200

Query: 186 GHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINP-QRTLFFEDSVRNIQAGKRVGL 244
                            + CKP   A EKA+K + +   +   F +DS +NI+ G ++G+
Sbjct: 201 -----------------LVCKPHVKAFEKAMKESGLARYENAYFIDDSGKNIETGIKLGM 243

Query: 245 DTVLIG-------KSQRVKGADYAFESIHNIKEAIPELW 276
            T +            +          I  +   + +L+
Sbjct: 244 KTCIHLVENEVNEILGQTPEGAIVISDILELPHVVSDLF 282

>2hoq_A Putative HAD-hydrolase PH1655; haloacid dehalogenase, structural genomics, NPPSFA, national on protein structural and functional analyses; 1.70A {Pyrococcus horikoshii} Length = 241

 Score = 68.6 bits (168), Expect = 9e-14
 Identities = 57/286 (19%), Positives = 98/286 (34%), Gaps = 72/286 (25%)

Query: 14  YDCLLFDLDDTLYPYSSGIAAACGQNIKDYMVEKLGIE----RSKIEDLGNLLYKNYGTT 69
              + FDLDDTL   S     A    I++ +   L ++     S++ +L      N+   
Sbjct: 2   VKVIFFDLDDTLVDTSKLAEIARKNAIENMIRHGLPVDFETAYSELIELIKEYGSNFPYH 61

Query: 70  MAGL-RAIGYDFDYDDYHSFVHG--RLPYENLKPDPVLRSLLLSLPLRKI---IFTNADK 123
              L R +   ++     + V       +  L+  P  R +L+ L        I T+ + 
Sbjct: 62  FDYLLRRLDLPYNPKWISAGVIAYHNTKFAYLREVPGARKVLIRLKELGYELGIITDGNP 121

Query: 124 VHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSDDEDDIAFVESAASTTTSANGPQIFD 183
           V   + + RL L+D FE +I            +SD                         
Sbjct: 122 VKQWEKILRLELDDFFEHVI------------ISDF------------------------ 145

Query: 184 IIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRN-IQAGKRV 242
             G                   KP     +KALK  ++ P+  L   D + + I   KRV
Sbjct: 146 -EGVK-----------------KPHPKIFKKALKAFNVKPEEALMVGDRLYSDIYGAKRV 187

Query: 243 GLDTVLIGKSQRVK-------GADYAFESIHNIKEAIPELWESDMK 281
           G+ TV     +  +        ADY  +++ ++ E +     S+ K
Sbjct: 188 GMKTVWFRYGKHSERELEYRKYADYEIDNLESLLEVLARESSSNKK 233

>1qyi_A ZR25, hypothetical protein; structural genomics, PSI, protein structure initiative, NORT structural genomics consortium, NESG; 2.50A {Staphylococcus aureus subsp} SCOP: c.108.1.13 Length = 384

 Score = 66.0 bits (160), Expect = 2e-12
 Identities = 47/282 (16%), Positives = 83/282 (29%), Gaps = 49/282 (17%)

Query: 13  KYDCLLFDLDDTLYPYSSGIAAACGQNIKDYMVEKLGIERSKIEDL----GNLLYKNYGT 68
                L  LD+     ++  AA     ++++   +L +  + +  L      L  + Y  
Sbjct: 129 NEQLPLQFLDNVKVGKNNIYAA-----LEEFATTELHVSDATLFSLKGALWTLAQEVYQE 183

Query: 69  TMAGLRAIGYDFDYDDYHSFVHGRLPYEN-LKPDPVLRSLLLSLPLRKI---IFTNADKV 124
              G +            +F  G +  E  L+P   ++ LL  L        I T     
Sbjct: 184 WYLGSKLYEDVEKKIARTTFKTGYIYQEIILRPVDEVKVLLNDLKGAGFELGIATGRPYT 243

Query: 125 HAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSDDEDDIAFVESAASTTTSANGPQIFDI 184
             V     LGL   FE              T SD  +                   ++  
Sbjct: 244 ETVVPFENLGLLPYFE---------ADFIATASDVLE----------------AENMYPQ 278

Query: 185 IGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGL 244
                +PNP               E  I K   I  +N        DS+ ++ + +++G 
Sbjct: 279 ARPLGKPNPFSYIAALYGNNRDKYESYINKQDNI--VNKDDVFIVGDSLADLLSAQKIGA 336

Query: 245 DTVLI-----GKSQRVK----GADYAFESIHNIKEAIPELWE 277
             +       GK    +     ADY    +  ++  +  L E
Sbjct: 337 TFIGTLTGLKGKDAAGELEAHHADYVINHLGELRGVLDNLLE 378

>2gfh_A Haloacid dehalogenase-like hydrolase domain conta; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.90A {Mus musculus} SCOP: c.108.1.6 PDB: 2w4m_A Length = 260

 Score = 61.0 bits (148), Expect = 4e-11
 Identities = 47/302 (15%), Positives = 85/302 (28%), Gaps = 85/302 (28%)

Query: 3   YEGRYRMAAAKYDCLLFDLDDTLYPYSSGIAAACGQNIKDYMVEKLGIERSKI------E 56
           +   + M  ++   + FDLD+TL   +        + IK    +    E ++I       
Sbjct: 7   HHHHHHMGLSRVRAVFFDLDNTLIDTAGASRRGMLEVIKLLQSKYHYKEEAEIICDKVQV 66

Query: 57  DLGNLLYKNYGTTMAGLR---------AIGYDFDYDD-----YHSFVHGRLPYENLKPD- 101
            L    +  Y T +  +R               D        Y  +   RL +  L  D 
Sbjct: 67  KLSKECFHPYSTCITDVRTSHWEEAIQETKGGADNRKLAEECYFLWKSTRLQHMILADDV 126

Query: 102 -PVLRSLLLSLPLRKIIFTNADKVHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSDDE 160
             +L  L   + L  ++ TN D+    + +     +  F+ I+            +  + 
Sbjct: 127 KAMLTELRKEVRL--LLLTNGDRQTQREKIEACACQSYFDAIV------------IGGE- 171

Query: 161 DDIAFVESAASTTTSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIAS 220
                                                        KP+         +  
Sbjct: 172 ------------------------QKEE-----------------KPAPSIFYHCCDLLG 190

Query: 221 INPQRTLFFEDSVRN-IQAGKRVGLD-TVLIGKSQRVKG-----ADYAFESIHNIKEAIP 273
           + P   +   D++   IQ G   GL  TV I KS RV         Y   S+  +   + 
Sbjct: 191 VQPGDCVMVGDTLETDIQGGLNAGLKATVWINKSGRVPLTSSPMPHYMVSSVLELPALLQ 250

Query: 274 EL 275
            +
Sbjct: 251 SI 252

>2om6_A Probable phosphoserine phosphatase; rossmann fold, B-hairpin, four-helix bundle, structural GENO NPPSFA; 2.20A {Pyrococcus horikoshii} Length = 235

 Score = 60.6 bits (147), Expect = 5e-11
 Identities = 40/291 (13%), Positives = 84/291 (28%), Gaps = 81/291 (27%)

Query: 12  AKYDCLLFDLDDTLYPYSSGIAAACGQNIKDYMVEKLGIERSKIEDLGNL--LYKNYGTT 69
            +   + FD+ +TL   +  +     Q  K   +    +  + IE    +  +       
Sbjct: 2   REVKLVTFDVWNTLLDLNIMLDEFSHQLAKISGLHIKDVANAVIEVRNEIKKMRAQASED 61

Query: 70  MAGLR---------AIGYDFD-----YDDYHSFVHGRLPYENLKPDPVLRSLLLSLPLRK 115
              +           +  D +            V   L  E  K    L+ +     L+ 
Sbjct: 62  PRKVLTGSQEALAGKLKVDVELVKRATARAILNVDESLVLEGTKE--ALQFVK-ERGLKT 118

Query: 116 IIFTNADKV---HAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSDDEDDIAFVESAAST 172
            +  N       +   +L R GL +  +                +D+             
Sbjct: 119 AVIGNVMFWPGSYTRLLLERFGLMEFIDKTF------------FADE------------- 153

Query: 173 TTSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDS 232
                       +  +                 KP +   EK L    + P+ +L   D+
Sbjct: 154 ------------VLSY-----------------KPRKEMFEKVLNSFEVKPEESLHIGDT 184

Query: 233 VRN-IQAGKRVGLDTVLI----GKSQRVKGADYAFESIHNIKEAIPELWES 278
                Q  ++VG+  V I     K ++++   +   SI N+K+ I  + ++
Sbjct: 185 YAEDYQGARKVGMWAVWINQEGDKVRKLEERGFEIPSIANLKDVIELISKT 235

>2pke_A Haloacid delahogenase-like family hydrolase; NP_639141.1, ST genomics, joint center for structural genomics, JCSG; 1.81A {Xanthomonas campestris PV} Length = 251

 Score = 59.3 bits (143), Expect = 2e-10
 Identities = 37/288 (12%), Positives = 81/288 (28%), Gaps = 83/288 (28%)

Query: 8   RMAAAKYDCLLFDLDDTLYPYSSGIAAACGQNIKDYMVEKLGIERSKI-EDLGNLLYKN- 65
           +        + FD DDTL+        A   + +  +   L +  S++ + L  +  +N 
Sbjct: 7   QRDGQAIQLVGFDGDDTLWKSEDYYRTAE-ADFEAILSGYLDLGDSRMQQHLLAVERRNL 65

Query: 66  --YGTTMAGLRAIGYDFDYDDYHSFVHGRLPYE-----------NLKPDPVLRSLLLSLP 112
             +G    G+     +   +   + +  R                ++    +R  + ++ 
Sbjct: 66  KIFGYGAKGMTLSMIETAIELTEARIEARDIQRIVEIGRATLQHPVEVIAGVREAVAAIA 125

Query: 113 --LRKIIFTNADKVHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSDDEDDIAFVESAA 170
                ++ T  D  H  + + + GL D F  I          K+                
Sbjct: 126 ADYAVVLITKGDLFHQEQKIEQSGLSDLFPRIEVVS-----EKD---------------- 164

Query: 171 STTTSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFE 230
                   PQ +                               + L    +  +R +   
Sbjct: 165 --------PQTYA------------------------------RVLSEFDLPAERFVMIG 186

Query: 231 DSVR-NIQAGKRVGLDTVLIGKSQRVKGADYAFESIHNIKEAIPELWE 277
           +S+R +++    +G   +            +A E  H +    P L E
Sbjct: 187 NSLRSDVEPVLAIGGWGIYTP-----YAVTWAHEQDHGVAADEPRLRE 229

>3kzx_A HAD-superfamily hydrolase, subfamily IA, variant; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ehrlich chaffeensis; 1.90A {Ehrlichia chaffeensis} Length = 231

 Score = 56.5 bits (137), Expect = 1e-09
 Identities = 44/271 (16%), Positives = 84/271 (30%), Gaps = 74/271 (27%)

Query: 13  KYDCLLFDLDDTLYPYSSGIAAACGQNIKDYMVEKLGIERSKIEDLGNLLYKNYGTTMAG 72
           +   ++FD  +TL   S  I           +++++G +   ++ + N     Y  T+ G
Sbjct: 24  QPTAVIFDWYNTLIDTSINIDRT----TFYQVLDQMGYKNIDLDSIPNSTIPKYLITLLG 79

Query: 73  LR----AIGYDFDYDDYHSFVHGRLPYENLKPDPVLRSLLLSLPLRKI---IFTNADKVH 125
            R     I Y+   +      +     +          LL +L    I   I +N +   
Sbjct: 80  KRWKEATILYENSLEKSQKSDNFM-LNDGAI------ELLDTLKENNITMAIVSNKNGER 132

Query: 126 AVKVLSRLGLEDCFEGIICFETLNPTHKNTVSDDEDDIAFVESAASTTTSANGPQIFDII 185
               +    L   F+ II       T K                                
Sbjct: 133 LRSEIHHKNLTHYFDSIIGSGDT-GTIK-------------------------------- 159

Query: 186 GHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQR-TLFFEDSVRNIQAGKRVGL 244
                P+P                  +  AL   +I P +   F  DS+ +IQ+    G 
Sbjct: 160 -----PSP----------------EPVLAALTNINIEPSKEVFFIGDSISDIQSAIEAGC 198

Query: 245 DTVLIGKSQRVKGADYAFESIHNIKEAIPEL 275
             +  G +  +K    +F++ ++I+  I +L
Sbjct: 199 LPIKYGSTNIIK-DILSFKNFYDIRNFICQL 228

>2zg6_A Putative uncharacterized protein ST2620, probable 2-haloalkanoic; probable 2-haloalkanoic acid dehalogenase, hydrolase, structural genomics; 2.40A {Sulfolobus tokodaii} Length = 220

 Score = 56.3 bits (136), Expect = 1e-09
 Identities = 32/280 (11%), Positives = 63/280 (22%), Gaps = 81/280 (28%)

Query: 13  KYDCLLFDLDDTLYPYSSGIAAACGQNIKDYMVEKLGIERSKIEDLGNLLYKNYGTTMAG 72
           KY  +L D  +TL  +         Q     +++  G +   +  +     K  G     
Sbjct: 2   KYKAVLVDFGNTLVGFKPVFYEKVYQ-----VLKDNGYDLD-LRKVFRAYAKAMGMINYP 55

Query: 73  -------------LRAIGYDFDYDDYHSFVHGRLPYENLKPDPVLRSLLLSLPLRKI--- 116
                        L  +G               +              L  L        
Sbjct: 56  DEDGLEHVDPKDFLYILGIYPSERLVKELKEADIRDGEAFLYDDTLEFLEGLKSNGYKLA 115

Query: 117 IFTNADKVHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSDDEDDIAFVESAASTTTSA 176
           + +NA       +L +  L+  F+ +             +S +                 
Sbjct: 116 LVSNASP-RVKTLLEKFDLKKYFDALA------------LSYE----------------- 145

Query: 177 NGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRN- 235
                   I                    KP+      AL          +   D     
Sbjct: 146 --------IKA-----------------VKPNPKIFGFALAKV---GYPAVHVGDIYELD 177

Query: 236 IQAGKRVGLDTVLIGKSQRVKGADYAFESIHNIKEAIPEL 275
               KR  +D +L+ +           +++    + I E+
Sbjct: 178 YIGAKRSYVDPILLDRYDFYPDVRDRVKNLREALQKIEEM 217

>3u26_A PF00702 domain protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, unknown function; 1.59A {Pyrococcus horikoshii} PDB: 1x42_A Length = 234

 Score = 55.5 bits (134), Expect = 3e-09
 Identities = 44/281 (15%), Positives = 84/281 (29%), Gaps = 78/281 (27%)

Query: 17  LLFDLDDTLYPYSSGIAAA----------CGQNIKDYMVEKLGIERSKIEDLGNLLYKNY 66
           + FD   TL        +              N K  + E   + R    +     Y+  
Sbjct: 5   VFFDSLGTLNSVEGAAKSHLKIMEEVLGDYPLNPKTLLDEYEKLTREAFSNYAGKPYRPL 64

Query: 67  GTTM-----AGLRAIGYDFDYDDYHSFVHGRLPYENLKPD--PVLRSLLLSLPLRKIIFT 119
              +           G+ +  + +   +     Y  L P+   VL+SL     +   + T
Sbjct: 65  RDILEEVMRKLAEKYGFKYPENFWEISLRMSQRYGELYPEVVEVLKSLKGKYHV--GMIT 122

Query: 120 NADKVHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSDDEDDIAFVESAASTTTSANGP 179
           ++D   A+  L  LG++D F+ I              S++                    
Sbjct: 123 DSDTEQAMAFLDALGIKDLFDSIT------------TSEE-------------------- 150

Query: 180 QIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRN-IQA 238
                 G F                 KP     E ALK A +  +  ++  D+       
Sbjct: 151 -----AGFF-----------------KPHPRIFELALKKAGVKGEEAVYVGDNPVKDCGG 188

Query: 239 GKRVGLDTVLI----GKSQRVKGADYAFESIHNIKEAIPEL 275
            K +G+ ++L+     K +     D+    +  + + + EL
Sbjct: 189 SKNLGMTSILLDRKGEKREFWDKCDFIVSDLREVIKIVDEL 229

>3ed5_A YFNB; APC60080, bacillus subtilis subsp. subtilis STR. 168, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.72A {Bacillus subtilis} PDB: 3i76_A Length = 238

 Score = 53.9 bits (130), Expect = 9e-09
 Identities = 43/282 (15%), Positives = 73/282 (25%), Gaps = 73/282 (25%)

Query: 13  KYDCLLFDLDDTLYPYSSGIAAACGQNIKDYMV---EKLGIERSKIEDLGNLLYKNYGTT 69
           +Y  LLFD+DDT+  + +  A A     +D  +     +  +   I       ++    T
Sbjct: 6   RYRTLLFDVDDTILDFQAAEALALRLLFEDQNIPLTNDMKAQYKTINQGLWRAFEEGKMT 65

Query: 70  MAGLR---------AIGYDFDYDDYHSFVHGRLPYENLKPDPVLRSLL--LSLPLRKIIF 118
              +            GY+ D           L  E  +       L+  L       I 
Sbjct: 66  RDEVVNTRFSALLKEYGYEADGALLEQKYRRFLE-EGHQLIDGAFDLISNLQQQFDLYIV 124

Query: 119 TNADKVHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSDDEDDIAFVESAASTTTSANG 178
           TN       K L   GL   F+ I   E                                
Sbjct: 125 TNGVSHTQYKRLRDSGLFPFFKDIFVSEDTGFQKPM------------------------ 160

Query: 179 PQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRN-IQ 237
            + F+                      +          +I   + + TL   DS+   I+
Sbjct: 161 KEYFN-------------------YVFE----------RIPQFSAEHTLIIGDSLTADIK 191

Query: 238 AGKRVGLDTVLIGKSQRVKG----ADYAFESIHNIKEAIPEL 275
            G+  GLDT  +    +         Y    +  +   +   
Sbjct: 192 GGQLAGLDTCWMNPDMKPNVPEIIPTYEIRKLEELYHILNIE 233

>3cnh_A Hydrolase family protein; NP_295428.1, predicted hydrolase of haloacid dehalogenase-LI superfamily; HET: MSE PG4; 1.66A {Deinococcus radiodurans R1} Length = 200

 Score = 52.4 bits (126), Expect = 2e-08
 Identities = 34/247 (13%), Positives = 66/247 (26%), Gaps = 77/247 (31%)

Query: 13  KYDCLLFDLDDTLYPYSSGIAAACGQNIKDYMVEKLGIERSKIEDLGNLLYKNY----GT 68
               L +D+   L               +  + ++ G++     +   L          T
Sbjct: 3   TIKALFWDIGGVLLTNGWDREQ------RADVAQRFGLDTDDFTERHRLAAPELELGRMT 56

Query: 69  TMAGLRAI----GYDFDYDDYHSFVHGRLPYENLKPDPVLRSLLLSLP--LRKIIFTNAD 122
               L  +      DF  +D+ + +      E  +P P + +L   L    R     N  
Sbjct: 57  LAEYLEQVVFYQPRDFTPEDFRAVME-----EQSQPRPEVLALARDLGQRYRMYSLNNEG 111

Query: 123 KVHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSDDEDDIAFVESAASTTTSANGPQIF 182
           +      +   GL +                   S                         
Sbjct: 112 RDLNEYRIRTFGLGEFLLAFF------------TSSAL---------------------- 137

Query: 183 DIIGHFAQPNPSLVALPKTPIACKPSELAI-EKALKIASINPQRTLFFEDSVRNIQAGKR 241
                  +PNP                 A+    L +A + P+  +  +D ++N+QA + 
Sbjct: 138 ----GVMKPNP-----------------AMYRLGLTLAQVRPEEAVMVDDRLQNVQAARA 176

Query: 242 VGLDTVL 248
           VG+  V 
Sbjct: 177 VGMHAVQ 183

>3qnm_A Haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 1.70A {Bacteroides thetaiotaomicron} Length = 240

 Score = 51.2 bits (123), Expect = 7e-08
 Identities = 49/285 (17%), Positives = 77/285 (27%), Gaps = 88/285 (30%)

Query: 13  KYDCLLFDLDDTLYPYSSGIAAACGQNIKDYMVEKLGIERSKIEDLGN-------LLYKN 65
           KY  L FDLDDT++ +S        +  + Y  ++          L         L Y  
Sbjct: 4   KYKNLFFDLDDTIWAFSRNARDTFEEVYQKYSFDRYFDSFDHYYTLYQRRNTELWLEYGE 63

Query: 66  YGTTMAGLR---------AIGYDFD------YDDY-HSFVHGRLPYENLKPDPVLRSLLL 109
              T   L          A+G + +       +D+            + K   VL  L  
Sbjct: 64  GKVTKEELNRQRFFYPLQAVGVEDEALAERFSEDFFAIIPTKSGLMPHAK--EVLEYLAP 121

Query: 110 SLPLRKIIFTNADKVHAVKVLSRLGLEDCFEGIICFETLN---PTHKNTVSDDEDDIAFV 166
              L   I +N  +    + +   G++  F+ II  E L    P                
Sbjct: 122 QYNL--YILSNGFRELQSRKMRSAGVDRYFKKIILSEDLGVLKPR--------------- 164

Query: 167 ESAASTTTSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRT 226
                       P+IF                                AL       + +
Sbjct: 165 ------------PEIFH------------------------------FALSATQSELRES 182

Query: 227 LFFEDSVRN-IQAGKRVGLDTVLIGKSQRVKGADYAFESIHNIKE 270
           L   DS    I     VG+       ++R          IH++KE
Sbjct: 183 LMIGDSWEADITGAHGVGMHQAFYNVTERTVFPFQPTYHIHSLKE 227

>2fdr_A Conserved hypothetical protein; SAD, structural genomics, agrobacter tumefaciens, HAD-superfamily hydrolase; 2.00A {Agrobacterium tumefaciens str} SCOP: c.108.1.6 Length = 229

 Score = 49.6 bits (119), Expect = 2e-07
 Identities = 37/288 (12%), Positives = 77/288 (26%), Gaps = 91/288 (31%)

Query: 12  AKYDCLLFDLDDTLY---PYS----SGIAAACGQNI--KDYMVEKLGIERSKIEDLGNLL 62
           + +D ++FD D  L      +    S +    G  I  ++      G+     +++   +
Sbjct: 2   SGFDLIIFDCDGVLVDSEIIAAQVESRLLTEAGYPISVEEMGERFAGM---TWKNILLQV 58

Query: 63  YKNYGTTMAGLRAIGYDFDYDDYHSFVHGRLPYENLKPDPVLRSLLLSLPLRKIIFTNAD 122
                  ++           D     +  RL   ++K    ++  L  L   + I +N+ 
Sbjct: 59  ESEASIPLS-------ASLLDKSEKLLDMRLE-RDVKIIDGVKFALSRLTTPRCICSNSS 110

Query: 123 KVHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSDDEDDIAFVESAASTTTSANG---P 179
                 +L+++GL+  F   I                         +A    +      P
Sbjct: 111 SHRLDMMLTKVGLKPYFAPHIY------------------------SAKDLGADRVKPKP 146

Query: 180 QIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAG 239
            IF                                      ++P R +  EDSV  I   
Sbjct: 147 DIF------------------------------LHGAAQFGVSPDRVVVVEDSVHGIHGA 176

Query: 240 KRVGLDTVLI----------GKSQRVKGADYAFESIHNIKEAIPELWE 277
           +  G+  +                   GA+     +      +P +  
Sbjct: 177 RAAGMRVIGFTGASHTYPSHADRLTDAGAETVISRMQ----DLPAVIA 220

>2wf7_A Beta-PGM, beta-phosphoglucomutase; transition state analogue, haloacid dehalogenase superfamily, isomerase, phosphotransferase; HET: G7P; 1.05A {Lactococcus lactis} PDB: 1o03_A* 1z4n_A* 1z4o_A* 1zol_A 2wf5_A* 2wf6_A* 1o08_A* 2wf8_A* 2wf9_A* 2wfa_A 2whe_A 1lvh_A* 3fm9_A Length = 221

 Score = 48.4 bits (116), Expect = 7e-07
 Identities = 47/292 (16%), Positives = 82/292 (28%), Gaps = 96/292 (32%)

Query: 14  YDCLLFDLD----DTLYPYSSGIAAACGQNIKDYMVEKLGIERSKIEDLGNLLYKNYG-T 68
           +  +LFDLD    DT   +      A        + E++GI     +    L     G +
Sbjct: 2   FKAVLFDLDGVITDTAEYH----FRAWKA-----LAEEIGINGVDRQFNEQLK----GVS 48

Query: 69  TMAGLRAI----GYDFDYDDYHSFVHG-----RLPYENLKPDPVL---RSLLLSLPLRKI 116
               L+ I          +++               +++ P  V      LL  L   KI
Sbjct: 49  REDSLQKILDLADKKVSAEEFKELAKRKNDNYVKMIQDVSPADVYPGILQLLKDLRSNKI 108

Query: 117 ---IFTNADKVHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSDDEDDIAFVESAASTT 173
              + + +   +   +L R+ L   F+ I                D  ++A         
Sbjct: 109 KIALASASK--NGPFLLERMNLTGYFDAIA---------------DPAEVA--------- 142

Query: 174 TSANG---PQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFE 230
                   P IF                                A     + P  ++  E
Sbjct: 143 ---ASKPAPDIF------------------------------IAAAHAVGVAPSESIGLE 169

Query: 231 DSVRNIQAGKRVGLDTVLIGKSQRVKGADYAFESIHNIK-EAIPELWESDMK 281
           DS   IQA K  G   + +G+ + +           +   E + E+W    K
Sbjct: 170 DSQAGIQAIKDSGALPIGVGRPEDLGDDIVIVPDTSHYTLEFLKEVWLQKQK 221

>3s6j_A Hydrolase, haloacid dehalogenase-like family; structural genomics, PSI-2; 2.20A {Pseudomonas syringae PV} Length = 233

 Score = 48.4 bits (116), Expect = 7e-07
 Identities = 38/289 (13%), Positives = 71/289 (24%), Gaps = 87/289 (30%)

Query: 9   MAAAKYDCLLFDLDDTLY---PYSSGIAAACGQNIKDYMVEKLGIERSKIEDLGNLLYKN 65
           M+       +FDLD TL      +               ++   I  +    +   +  +
Sbjct: 1   MSLRPQTSFIFDLDGTLTDSVYQNVAAWKE--------ALDAENIPLAM-WRIHRKIGMS 51

Query: 66  YGTTMAGL-RAIGYDFDYDDYHSFVHGRLPY-----ENLKPDPVLRSLLLSLPLRKI--- 116
            G  +  L R  G     +                   +   P    LL +L    +   
Sbjct: 52  GGLMLKSLSRETGMSITDEQAERLSEKHAQAYERLQHQIIALPGAVELLETLDKENLKWC 111

Query: 117 IFTNADKVHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSDDEDDIAFVESAASTTTSA 176
           I T+     A   L  L L+     I+  + +                           +
Sbjct: 112 IATSGGIDTATINLKALKLDINKINIVTRDDV---------------------------S 144

Query: 177 NG---PQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSV 233
            G   P +F            L A                K +          L   D++
Sbjct: 145 YGKPDPDLF------------LAAA---------------KKIGAP---IDECLVIGDAI 174

Query: 234 RNIQAGKRVGLDTVLIG------KSQRVKGADYAFESIHNIKEAIPELW 276
            ++ A +R     V +             GA   +E   ++   + E+ 
Sbjct: 175 WDMLAARRCKATGVGLLSGGYDIGELERAGALRVYEDPLDLLNHLDEIA 223

>3mc1_A Predicted phosphatase, HAD family; PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.93A {Clostridium acetobutylicum} Length = 226

 Score = 47.9 bits (115), Expect = 8e-07
 Identities = 43/287 (14%), Positives = 82/287 (28%), Gaps = 86/287 (29%)

Query: 13  KYDCLLFDLDDTLYPYSSGIAAACGQNIKDYMVEKLGIERSKIEDL----GN----LLYK 64
            Y+ +LFDLD TL   + GI  +       Y + K  I+   +  L    G        +
Sbjct: 3   LYNYVLFDLDGTLTDSAEGITKSV-----KYSLNKFDIQVEDLSSLNKFVGPPLKTSFME 57

Query: 65  NYGTTMAGLRAI--GYDFDYDDYHSFVHGRLPYENLKPDPVLRSLLLSLPLRKI---IFT 119
            Y             Y   +     F   +  Y+ ++      +LL SL        + T
Sbjct: 58  YYNFDEETATVAIDYYRDYFKAKGMF-ENK-VYDGIE------ALLSSLKDYGFHLVVAT 109

Query: 120 NADKVHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSDDEDDIAFVESAASTTTSANGP 179
           +   V + ++L    L   F+ I+   +L+                              
Sbjct: 110 SKPTVFSKQILEHFKLAFYFDAIVG-SSLDGKLS-------------------------- 142

Query: 180 QIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAG 239
                                           I  A++  +I     +   D   ++   
Sbjct: 143 -----------TKE----------------DVIRYAMESLNIKSDDAIMIGDREYDVIGA 175

Query: 240 KRVGLDTVLI------GKSQRVKGADYAFESIHNIKEAIPELWESDM 280
            +  L ++ +       +  +  GA+Y   S+  + + I EL E   
Sbjct: 176 LKNNLPSIGVTYGFGSYEELKNAGANYIVNSVDELHKKILELREGHH 222

>3ddh_A Putative haloacid dehalogenase-like family hydrol; hydrolase, HAD superfamily, ST genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides thetaiotaomicron} Length = 234

 Score = 46.8 bits (111), Expect = 3e-06
 Identities = 28/150 (18%), Positives = 44/150 (29%), Gaps = 16/150 (10%)

Query: 13  KYDCLLFDLDDTLYPYSSGIAAACGQ---NIKDYMVEKLGIERSKIEDLGNLLYKNYGTT 69
               + FD DDTL+           Q    +K Y   K         ++ NL    YG  
Sbjct: 7   LIKVIAFDADDTLWSNEPFFQEVEKQYTDLLKPYGTSKEISAALFQTEMNNLQILGYGAK 66

Query: 70  M-------AGLRAIGYDFDYDDYHSFVHGRLPY--ENLKPDPVLRSLLLSL----PLRKI 116
                     L+        D     V          ++  P ++  L +L      + +
Sbjct: 67  AFTISMVETALQISNGKIAADIIRQIVDLGKSLLKMPIELLPGVKETLKTLKETGKYKLV 126

Query: 117 IFTNADKVHAVKVLSRLGLEDCFEGIICFE 146
           + T  D +     L R GL   F+ I    
Sbjct: 127 VATKGDLLDQENKLERSGLSPYFDHIEVMS 156

>3d6j_A Putative haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides fragilis nctc 9343} Length = 225

 Score = 46.0 bits (110), Expect = 3e-06
 Identities = 40/282 (14%), Positives = 69/282 (24%), Gaps = 85/282 (30%)

Query: 13  KYDCLLFDLDDTLYPYSSGIAAACGQNIKDYMVEKLGIERSKIEDL----GN----LLYK 64
           KY   LFD D TL   S GI           ++E+ G      + +    G         
Sbjct: 5   KYTVYLFDFDYTLADSSRGIVTCF-----RSVLERHGYTGITDDMIKRTIGKTLEESFSI 59

Query: 65  NYGTTMAGLRAIGYDFDYDDYHSFVHGRL--PYENLKPDPVLRSLLLSLPLRKI---IFT 119
             G T A         +Y              + +  P       L  L  + I   I +
Sbjct: 60  LTGITDADQLESFRQ-EYSKEADIYMNANTILFPDTLP------TLTHLKKQGIRIGIIS 112

Query: 120 NADKVHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSDDEDDIAFVESAASTTTSANGP 179
              +   +  L     +D F+ II  E +   HK                          
Sbjct: 113 TKYRFRILSFLRNHMPDDWFDIIIGGEDV-THHK-------------------------- 145

Query: 180 QIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAG 239
                      P+P                  +  A+      P+  L+  DS  +    
Sbjct: 146 -----------PDP----------------EGLLLAIDRLKACPEEVLYIGDSTVDAGTA 178

Query: 240 KRVGLDTVLI------GKSQRVKGADYAFESIHNIKEAIPEL 275
              G+    +       +  +    D    ++  +     + 
Sbjct: 179 AAAGVSFTGVTSGMTTAQEFQAYPYDRIISTLGQLISVPEDK 220

>3nas_A Beta-PGM, beta-phosphoglucomutase; PSI, structural genomics, protein structure initiative, NEW research center for structural genomics; 3.00A {Bacillus subtilis} Length = 233

 Score = 46.1 bits (110), Expect = 4e-06
 Identities = 19/71 (26%), Positives = 30/71 (42%), Gaps = 1/71 (1%)

Query: 214 KALKIASINPQRTLFFEDSVRNIQAGKRVGLDTVLIGKSQRVKGADYAFESIHNIK-EAI 272
            A  +  ++P      ED+   I A K  G+  V +G+ Q + GAD       ++  E +
Sbjct: 154 TAAAMLDVSPADCAAIEDAEAGISAIKSAGMFAVGVGQGQPMLGADLVVRQTSDLTLELL 213

Query: 273 PELWESDMKSE 283
            E WE     E
Sbjct: 214 HEEWEQYRIRE 224

>4dcc_A Putative haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 1.65A {Bacteroides thetaiotaomicron} PDB: 4dfd_A 4f71_A 4f72_A Length = 229

 Score = 45.2 bits (107), Expect = 6e-06
 Identities = 32/246 (13%), Positives = 61/246 (24%), Gaps = 57/246 (23%)

Query: 8   RMAAAKYDCLLFDLDDTLYPYS--SGIAAACGQNIKDYMVEKLGIERSKIE---DLGNLL 62
            M +     LL DL   L        I        ++   +    +   I    + G + 
Sbjct: 22  SMKSKGIKNLLIDLGGVLINLDRERCIENFKKIGFQNIEEKFCTHQLDGIFLQQEKGLIT 81

Query: 63  YKNYGTTMAGLRAIGYDFDYDDYHSFVHGRLPYENLKPDPVLRSLLLSLPLRKIIFTNAD 122
              +   +     +G         +  +  L         +L  L     +   + +N +
Sbjct: 82  PAEFRDGIR--EMMGKMVSDKQIDAAWNSFLVDIPTYKLDLLLKLREKYVVY--LLSNTN 137

Query: 123 KVHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSDDEDDIAFVESAASTTTSANGPQIF 182
            +H   V         F+    FE                     S              
Sbjct: 138 DIHWKWVCKNAFPYRTFKVEDYFE-----------------KTYLSYE------------ 168

Query: 183 DIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRV 242
             +                    KP     +   + A I+P+ T F +DS  N +  + +
Sbjct: 169 --MKM-----------------AKPEPEIFKAVTEDAGIDPKETFFIDDSEINCKVAQEL 209

Query: 243 GLDTVL 248
           G+ T  
Sbjct: 210 GISTYT 215

>2hdo_A Phosphoglycolate phosphatase; NP_784602.1, structur genomics, PSI-2, protein structure initiative, joint center structural genomics; HET: MSE; 1.50A {Lactobacillus plantarum} SCOP: c.108.1.6 Length = 209

 Score = 45.2 bits (108), Expect = 7e-06
 Identities = 37/281 (13%), Positives = 69/281 (24%), Gaps = 96/281 (34%)

Query: 13  KYDCLLFDLD----DTLYPYSSGIAAACGQNIKDYMVEKLGIERSKIEDLGNLLYKNY-G 67
            Y  L+FD+D    ++                   ++   G   S  +       K +  
Sbjct: 3   TYQALMFDIDGTLTNSQP----AYTTVM-----REVLATYGKPFSPAQ-----AQKTFPM 48

Query: 68  TTMAGL--RAIG----------YDFDYDDYHSFVHGRLPYENLKPDPVLRSLLLSLPLRK 115
                +    I           Y+     ++  +     Y  +    +   L   L L  
Sbjct: 49  AAEQAMTELGIAASEFDHFQAQYEDVMASHYDQIE---LYPGITS--LFEQLPSELRL-- 101

Query: 116 IIFTNADKVHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSDDEDDIAFVESAASTTTS 175
            I T+  +      +            I  +   P  K                      
Sbjct: 102 GIVTSQRRNELESGMRSYPFMMRMAVTISADDT-PKRK---------------------- 138

Query: 176 ANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRN 235
                          P+P                L +  AL+  ++ PQ  LF  DSV +
Sbjct: 139 ---------------PDP----------------LPLLTALEKVNVAPQNALFIGDSVSD 167

Query: 236 IQAGKRVGLDTVLI----GKSQRVKGADYAFESIHNIKEAI 272
            Q  +   +D  L       +   +   + F+   +I E  
Sbjct: 168 EQTAQAANVDFGLAVWGMDPNADHQKVAHRFQKPLDILELF 208

>2fi1_A Hydrolase, haloacid dehalogenase-like family; structural genomics, haloacid dehalogenase-like F PSI, protein structure initiative; 1.40A {Streptococcus pneumoniae} SCOP: c.108.1.3 Length = 190

 Score = 43.7 bits (104), Expect = 1e-05
 Identities = 32/252 (12%), Positives = 63/252 (25%), Gaps = 87/252 (34%)

Query: 9   MAAAKYDCLLFDLDDTL---YPYSSGIAAACGQNIKDYMVEKLGIE------RSKIEDLG 59
           M   KY   ++DL  TL   Y       AA         +   GI          ++   
Sbjct: 1   MKGMKYHDYIWDLGGTLLDNYE---TSTAAF-----VETLALYGITQDHDSVYQALKVST 52

Query: 60  NLLYKNYGTTMAGLRAIGYDFDYDDYHSFVHGRLPYENLKPDPVLRSLLLSLPLRKI--- 116
               + +   +       Y  +             +E +        LL  +  +     
Sbjct: 53  PFAIETFAPNLENFLEK-YKENEARELEHPI---LFEGVSD------LLEDISNQGGRHF 102

Query: 117 IFTNADKVHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSDDEDDIAFVESAASTTTSA 176
           + ++ +    +++L +  +   F  ++   +     K                       
Sbjct: 103 LVSHRND-QVLEILEKTSIAAYFTEVVTSSSG-FKRK----------------------- 137

Query: 177 NGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNI 236
                         PNP                 ++    +         L   D   +I
Sbjct: 138 --------------PNP----------------ESMLYLRE--KYQISSGLVIGDRPIDI 165

Query: 237 QAGKRVGLDTVL 248
           +AG+  GLDT L
Sbjct: 166 EAGQAAGLDTHL 177

>2pr7_A Haloacid dehalogenase/epoxide hydrolase family; NP_599989.1, uncharacterized protein, structural genomics; 1.44A {Corynebacterium glutamicum atcc 13032} Length = 137

 Score = 42.4 bits (100), Expect = 2e-05
 Identities = 23/180 (12%), Positives = 46/180 (25%), Gaps = 67/180 (37%)

Query: 72  GLRAIGYDFDYDDYHSFVHGRLPYENLKPDPVLRSLLLSL---PLRKIIFTNADKVHAVK 128
           G+R +       DY   + G       +     R+LL +     +  +I +N        
Sbjct: 1   GMRGL-----IVDYAGVLDGTD-----EDQRRWRNLLAAAKKNGVGTVILSNDPGGLGAA 50

Query: 129 VLSRLGLEDCFEGIICFETLNPTHKNTVSDDEDDIAFVESAASTTTSANGPQIFDIIGHF 188
            +  L      + ++            +S +                             
Sbjct: 51  PIRELETNGVVDKVL------------LSGELG--------------------------- 71

Query: 189 AQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTVL 248
                            KP E A + A     +  +  +  +DS+ N++     GL  V 
Sbjct: 72  ---------------VEKPEEAAFQAAADAIDLPMRDCVLVDDSILNVRGAVEAGLVGVY 116

>3smv_A S-(-)-azetidine-2-carboxylate hydrolase; haloacid dehalogenase superfamily, L-azetidine-2- carboxylate; HET: GOL; 1.38A {Pseudomonas} Length = 240

 Score = 43.3 bits (102), Expect = 4e-05
 Identities = 33/158 (20%), Positives = 57/158 (36%), Gaps = 32/158 (20%)

Query: 9   MAAAKYDCLLFDLDDTLYPYSSGIAAACGQNIKDYMVEKLGIERSKIEDLGNLLYKNYGT 68
           M    +  L FD   TL  + +GI  A        + ++ G   +  E     L + +G 
Sbjct: 1   MQLTDFKALTFDCYGTLIDWETGIVNALQP-----LAKRTGKTFTSDE-----LLEVFGR 50

Query: 69  TMAGLRAIGYDFDYDDYHSFVHGRLPYE-NLKPDPVLRSLLLSLP--------------- 112
             +  +       Y D    V+ R+  E  L+PD   R    +                 
Sbjct: 51  NESPQQTETPGALYQDILRAVYDRIAKEWGLEPDAAEREEFGTSVKNWPAFPDTVEALQY 110

Query: 113 LRK----IIFTNADKVHAVKVLSRLGLEDCFEGIICFE 146
           L+K    +I +N D+       ++LG+E  F+ II  +
Sbjct: 111 LKKHYKLVILSNIDRNEFKLSNAKLGVE--FDHIITAQ 146

>2i6x_A Hydrolase, haloacid dehalogenase-like family; HAD superfamily, struct genomics, PSI-2, protein structure initiative; HET: MSE; 2.40A {Porphyromonas gingivalis} Length = 211

 Score = 42.4 bits (100), Expect = 5e-05
 Identities = 12/44 (27%), Positives = 21/44 (47%), Gaps = 2/44 (4%)

Query: 206 KPSELAI-EKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTVL 248
           KP    I  + +  + + P+ TLF +D   N+   +R+G  T  
Sbjct: 150 KP-NEDIFLEMIADSGMKPEETLFIDDGPANVATAERLGFHTYC 192

>2nyv_A Pgpase, PGP, phosphoglycolate phosphatase; structural genomics, PSI-2, protein structure initiative; 2.10A {Aquifex aeolicus} PDB: 2yy6_A Length = 222

 Score = 42.2 bits (100), Expect = 7e-05
 Identities = 47/288 (16%), Positives = 89/288 (30%), Gaps = 97/288 (33%)

Query: 13  KYDCLLFDLD----DTLYPYSSGIAAACGQNIKDYMVEKLGIERSKIEDLGNLLYKNY-G 67
               +LFDLD    D+       IA A      +  +++LG+E    ++        Y G
Sbjct: 2   SLRVILFDLDGTLIDSAK----DIALAL-----EKTLKELGLEEYYPDN-----VTKYIG 47

Query: 68  TTMAGL--RAIGYDF------DYDDY---HSFVHGRLPYENLKPDPVLRSLLLSLPLRKI 116
             +  L  + +   F       +  +   +  V+ + PY  +         L +L  +  
Sbjct: 48  GGVRALLEKVLKDKFREEYVEVFRKHYLENPVVYTK-PYPEIPY------TLEALKSKGF 100

Query: 117 ---IFTNADKVHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSDDEDDIAFVESAASTT 173
              + +N  +  + K+L  L L   F+ I+  +T     K                    
Sbjct: 101 KLAVVSNKLEELSKKILDILNLSGYFDLIVGGDTF-GEKK-------------------- 139

Query: 174 TSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSV 233
                            P+P                  + K L+I    P++ L   D+ 
Sbjct: 140 -----------------PSP----------------TPVLKTLEILGEEPEKALIVGDTD 166

Query: 234 RNIQAGKRVGLDTVLIG---KSQRVKGADYAFESIHNIKEAIPELWES 278
            +I+AGKR G  T L          +  D+      ++ + +      
Sbjct: 167 ADIEAGKRAGTKTALALWGYVKLNSQIPDFTLSRPSDLVKLMDNHIVE 214

>2b0c_A Putative phosphatase; alpha-D-glucose-1-phosphate, structural genomic protein structure initiative, midwest center for structural genomics, MCSG; HET: G1P; 2.00A {Escherichia coli} SCOP: c.108.1.2 Length = 206

 Score = 41.9 bits (99), Expect = 7e-05
 Identities = 14/45 (31%), Positives = 26/45 (57%), Gaps = 2/45 (4%)

Query: 205 CKPSELAI-EKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTVL 248
            KP E  I +  L+    +P  T+FF+D+  NI+   ++G+ ++L
Sbjct: 147 RKP-EARIYQHVLQAEGFSPSDTVFFDDNADNIEGANQLGITSIL 190

>2hi0_A Putative phosphoglycolate phosphatase; YP_619066.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.51A {Lactobacillus delbrueckii} Length = 240

 Score = 41.9 bits (99), Expect = 1e-04
 Identities = 14/76 (18%), Positives = 32/76 (42%), Gaps = 6/76 (7%)

Query: 203 IACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTVLI------GKSQRVK 256
           I  KP+     + +K+  +   + ++  DS  +IQ  +   +D + +          +  
Sbjct: 162 IRRKPAPDMTSECVKVLGVPRDKCVYIGDSEIDIQTARNSEMDEIAVNWGFRSVPFLQKH 221

Query: 257 GADYAFESIHNIKEAI 272
           GA    ++   ++EAI
Sbjct: 222 GATVIVDTAEKLEEAI 237

>3m9l_A Hydrolase, haloacid dehalogenase-like family; HAD family hydrolase, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Pseudomonas fluorescens} PDB: 2ybd_A* 3r09_A* Length = 205

 Score = 41.4 bits (98), Expect = 1e-04
 Identities = 12/72 (16%), Positives = 28/72 (38%), Gaps = 2/72 (2%)

Query: 206 KPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTVLI--GKSQRVKGADYAFE 263
           KP    + K  +   ++P R +   D   ++  G+  G  TVL+    +   +  D+   
Sbjct: 127 KPHPGGLLKLAEAWDVSPSRMVMVGDYRFDLDCGRAAGTRTVLVNLPDNPWPELTDWHAR 186

Query: 264 SIHNIKEAIPEL 275
               +++ +   
Sbjct: 187 DCAQLRDLLSAE 198

>3qxg_A Inorganic pyrophosphatase; hydrolase, magnesium binding site, NEW YORK research center for structural genomics; HET: TLA; 1.24A {Bacteroides thetaiotaomicron} PDB: 3qu2_A* 3qx7_A 3quq_A* 3r9k_A 3qut_A 3qu9_A* 3qu7_A 3qu5_A 3qyp_A 3quc_A 3qub_A 3qu4_A Length = 243

 Score = 41.9 bits (99), Expect = 1e-04
 Identities = 13/68 (19%), Positives = 28/68 (41%), Gaps = 6/68 (8%)

Query: 214 KALKIASINPQRTLFFEDSVRNIQAGKRVGLDTVLIGKSQ------RVKGADYAFESIHN 267
            ALK   +     +  E++   ++AG + G+ T+ +             GAD  F S+  
Sbjct: 174 MALKKGGLKADEAVVIENAPLGVEAGHKAGIFTIAVNTGPLDGQVLLDAGADLLFPSMQT 233

Query: 268 IKEAIPEL 275
           + ++   +
Sbjct: 234 LCDSWDTI 241

>2hsz_A Novel predicted phosphatase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: UNL; 1.90A {Haemophilus somnus 129PT} SCOP: c.108.1.6 Length = 243

 Score = 41.4 bits (98), Expect = 1e-04
 Identities = 39/299 (13%), Positives = 79/299 (26%), Gaps = 105/299 (35%)

Query: 7   YRMAAAKYDCLLFDLD----DTLYPYSSGIAAACGQNIKDYMVEKLG------------- 49
           Y     ++  + FDLD    ++L      +A +      +  ++ +              
Sbjct: 16  YFQGMTQFKLIGFDLDGTLVNSLP----DLALSI-----NSALKDVNLPQASENLVMTWI 66

Query: 50  -------IERSKIEDLGNLLYKNYGTTMAGLRAIGYDFDYDDYHSFVHGRLPYENLKPDP 102
                   +R+          +         +   + F Y + +     R  Y N+K   
Sbjct: 67  GNGADVLSQRAVDWACKQAEKELTEDEFKYFKRQ-FGFYYGE-NLCNISR-LYPNVKE-- 121

Query: 103 VLRSLLLSLPLRKI---IFTNADKVHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSDD 159
                L +L  +     + TN    H   +L+  G++  F  ++  ++L P  K      
Sbjct: 122 ----TLEALKAQGYILAVVTNKPTKHVQPILTAFGIDHLFSEMLGGQSL-PEIK------ 170

Query: 160 EDDIAFVESAASTTTSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIA 219
                                          P+P                          
Sbjct: 171 -------------------------------PHP----------------APFYYLCGKF 183

Query: 220 SINPQRTLFFEDSVRNIQAGKRVGLDTVLI------GKSQRVKGADYAFESIHNIKEAI 272
            + P++ LF  DS  +I A    G   V +               D+ F+   +I +  
Sbjct: 184 GLYPKQILFVGDSQNDIFAAHSAGCAVVGLTYGYNYNIPIAQSKPDWIFDDFADILKIT 242

>3sd7_A Putative phosphatase; structural genomics, haloacid dehalogenase-like hydrolase, H center for structural genomics of infectious diseases; HET: PGE; 1.70A {Clostridium difficile} Length = 240

 Score = 41.4 bits (98), Expect = 1e-04
 Identities = 28/150 (18%), Positives = 50/150 (33%), Gaps = 25/150 (16%)

Query: 13  KYDCLLFDLDDTLYPYSSGIAAACGQNIKDYMVEKLGIERSKIEDL----GNLLYKNYGT 68
            Y+ +LFDLD TL     GI  +       Y +   GI+   +E+L    G         
Sbjct: 28  NYEIVLFDLDGTLTDPKEGITKSI-----QYSLNSFGIKED-LENLDQFIGP------PL 75

Query: 69  TMAGLRAIGYDFD-----YDDYHSFVHGRLPYENLKPDPVLRSLLLSLPLRKI---IFTN 120
                    ++        + Y  +   +  +EN K    ++ +L  L        + T+
Sbjct: 76  HDTFKEYYKFEDKKAKEAVEKYREYFADKGIFEN-KIYENMKEILEMLYKNGKILLVATS 134

Query: 121 ADKVHAVKVLSRLGLEDCFEGIICFETLNP 150
              V A  +L    ++  F+ I        
Sbjct: 135 KPTVFAETILRYFDIDRYFKYIAGSNLDGT 164

>2go7_A Hydrolase, haloacid dehalogenase-like family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.10A {Streptococcus pneumoniae} SCOP: c.108.1.6 Length = 207

 Score = 41.0 bits (97), Expect = 2e-04
 Identities = 33/245 (13%), Positives = 68/245 (27%), Gaps = 74/245 (30%)

Query: 13  KYDCLLFDLDDTL---YPYSSGIAAACGQNIKDYMVEKLGIERSKIED---LGNLLYKNY 66
           +    ++DLD TL   Y     I +       +    +  I   K +    +     ++ 
Sbjct: 3   QKTAFIWDLDGTLLDSYE---AILSGI-----EETFAQFSIPYDKEKVREFIFKYSVQDL 54

Query: 67  GTTMAGLRAIGYDFDYDDYHSFVHGRLPYENLKPDPVLRSLLLSLPLRKI---IFTNADK 123
              +A  R +  +   +   +          +   P  R +L       I   I+T+   
Sbjct: 55  LVRVAEDRNLDVEV-LNQVRAQ-SLAEKNAQVVLMPGAREVLAWADESGIQQFIYTHKGN 112

Query: 124 VHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSDDEDDIAFVESAASTTTSANGPQIFD 183
            +A  +L  LG+E  F  I+  ++     K                              
Sbjct: 113 -NAFTILKDLGVESYFTEILTSQSG-FVRK------------------------------ 140

Query: 184 IIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVG 243
                  P+P                 A    L    +N   T +  D   +++  +  G
Sbjct: 141 -------PSP----------------EAATYLLDKYQLNSDNTYYIGDRTLDVEFAQNSG 177

Query: 244 LDTVL 248
           + ++ 
Sbjct: 178 IQSIN 182

>2p11_A Hypothetical protein; putative haloacid dehalogenase-like hydrolase, structural GE joint center for structural genomics, JCSG; 2.20A {Burkholderia xenovorans} Length = 231

 Score = 40.9 bits (95), Expect = 2e-04
 Identities = 46/211 (21%), Positives = 72/211 (34%), Gaps = 30/211 (14%)

Query: 9   MAAAKYDCLLFDLDDTLYPYSSGIAAACGQNIKDYMVEKLGIERSK-----IEDL-GNLL 62
            A       LFD D+TL   +  + A        +M+ + G + S       E L   L 
Sbjct: 6   TATPHDIVFLFDCDNTLLD-NDHVLADLRA----HMMREFGAQNSARYWEIFETLRTELG 60

Query: 63  YKNYGTTMAGLRA-IGYDFDYDDYHSFVHGRLPYENLKPDPVLRSL-LLSLPLRKIIFTN 120
           Y +Y   +   R     D       SF+        + P   L +L  L      +I ++
Sbjct: 61  YADYLGALQRYRLEQPRDTRLLLMSSFLIDYPFASRVYPG-ALNALRHLGARGPTVILSD 119

Query: 121 ADKVHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSDDE------------DDIAFVES 168
            D V   + ++R GL D  EG +    L   HK  + D              DD   + +
Sbjct: 120 GDVVFQPRKIARSGLWDEVEGRV----LIYIHKELMLDQVMECYPARHYVMVDDKLRILA 175

Query: 169 AASTTTSANGPQIFDIIGHFAQPNPSLVALP 199
           A      A    +F   GH+A     + + P
Sbjct: 176 AMKKAWGARLTTVFPRQGHYAFDPKEISSHP 206

>3k1z_A Haloacid dehalogenase-like hydrolase domain-conta protein 3; HDHD3, haloacid dehalogenase-like hydrolase domain containin structural genomics; 1.55A {Homo sapiens} Length = 263

 Score = 40.9 bits (96), Expect = 2e-04
 Identities = 36/288 (12%), Positives = 71/288 (24%), Gaps = 83/288 (28%)

Query: 16  CLLFDLDDTLYPYSSGIAAACGQNIKDYMVEKLGIE-----RSKIEDLGNLLYKNYGTTM 70
            L +D+ DTL      +  A     + + +E          R       +       +  
Sbjct: 3   LLTWDVKDTLLRLRHPLGEAYATKARAHGLEVEPSALEQGFRQAYRAQSHSFPNYGLSHG 62

Query: 71  AGLRAIGYDFDYDDYHS---------------FVHGRLPYENLKPDPVLRSLLLSLPLRK 115
              R    D     +H                           +        L     R 
Sbjct: 63  LTSRQWWLDVVLQTFHLAGVQDAQAVAPIAEQLYKDFSHPCTWQVLDGAEDTLRECRTRG 122

Query: 116 I---IFTNADKVHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSDDEDDIAFVESAAST 172
           +   + +N D+     +L  LGL + F+ +              S+              
Sbjct: 123 LRLAVISNFDR-RLEGILGGLGLREHFDFV------------LTSEA------------- 156

Query: 173 TTSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDS 232
                        G                   KP     ++AL++A + P       D+
Sbjct: 157 ------------AG-----------------WPKPDPRIFQEALRLAHMEPVVAAHVGDN 187

Query: 233 VRN-IQAGKRVGLDTVLI----GKSQRVKGADYAFESIHNIKEAIPEL 275
                Q  + VG+ + L+         V+ +      + ++   +P L
Sbjct: 188 YLCDYQGPRAVGMHSFLVVGPQALDPVVRDSVPKEHILPSLAHLLPAL 235

>3e58_A Putative beta-phosphoglucomutase; structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.86A {Streptococcus thermophilus lmg 18311} Length = 214

 Score = 39.9 bits (94), Expect = 4e-04
 Identities = 15/62 (24%), Positives = 25/62 (40%), Gaps = 3/62 (4%)

Query: 214 KALKIASINPQRTLFFEDSVRNIQAGKRVGLDTVLIG---KSQRVKGADYAFESIHNIKE 270
            ALK  ++   R L  EDS + I AG    ++   I           A    +S+ ++ +
Sbjct: 153 TALKQLNVQASRALIIEDSEKGIAAGVAADVEVWAIRDNEFGMDQSAAKGLLDSLTDVLD 212

Query: 271 AI 272
            I
Sbjct: 213 LI 214

>3dv9_A Beta-phosphoglucomutase; structural genomics, APC60149, PSI- protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.72A {Bacteroides vulgatus} Length = 247

 Score = 39.6 bits (93), Expect = 6e-04
 Identities = 17/70 (24%), Positives = 27/70 (38%), Gaps = 10/70 (14%)

Query: 214 KALKIASINPQRTLFFEDSVRNIQAGKRVGLDTVLIG------KSQRVKGADYAFESIHN 267
            ALK     P   L  E++   +QAG   G+ T+ +            +GA+  F S+  
Sbjct: 173 MALKKGGFKPNEALVIENAPLGVQAGVAAGIFTIAVNTGPLHDNVLLNEGANLLFHSM-- 230

Query: 268 IKEAIPELWE 277
                 + WE
Sbjct: 231 --PDFNKNWE 238

>3ib6_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.20A {Listeria monocytogenes} Length = 189

 Score = 39.0 bits (91), Expect = 7e-04
 Identities = 10/78 (12%), Positives = 26/78 (33%), Gaps = 9/78 (11%)

Query: 206 KPSELAIEKALKIASINPQRTLFFEDSVRN-IQAGKRVGLDTVLI-------GKSQRVKG 257
           KP +   +  L    I+    +   ++  + I    R G+  + +          +    
Sbjct: 97  KPDKTIFDFTLNALQIDKTEAVMVGNTFESDIIGANRAGIHAIWLQNPEVCLQDERLPLV 156

Query: 258 ADYAFESIHNIKEAIPEL 275
           A      + ++ + +PE 
Sbjct: 157 APPFVIPVWDLAD-VPEA 173

>4eek_A Beta-phosphoglucomutase-related protein; hydrolase, magnesium binding site, enzyme function initiativ; 1.60A {Deinococcus radiodurans} PDB: 4eel_A* 4een_A Length = 259

 Score = 39.3 bits (92), Expect = 8e-04
 Identities = 29/144 (20%), Positives = 49/144 (34%), Gaps = 16/144 (11%)

Query: 9   MAAAKYDCLLFDLDDTLYPYSSGIAAACGQNIKDYMVEKLGIERSKIEDLGNLLYKNYGT 68
           M  A +D +LFDLD  L   S GI A   Q+    ++ + G+     E       + +  
Sbjct: 23  MPDAPFDAVLFDLDGVLVE-SEGIIAQVWQS----VLAERGLHLDLTEIAMYFTGQRFDG 77

Query: 69  TMAGLRAIGYDFDYDDYHSFVHGRLPYEN-----LKPDPVLRSLLLSLPLRKI---IFTN 120
            +A L       D+     F+       N     +         L +L    +   I +N
Sbjct: 78  VLAYLAQ---QHDFVPPPDFLDVLETRFNAAMTGVTAIEGAAETLRALRAAGVPFAIGSN 134

Query: 121 ADKVHAVKVLSRLGLEDCFEGIIC 144
           +++      L   GL +     I 
Sbjct: 135 SERGRLHLKLRVAGLTELAGEHIY 158

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	298
3nuq_A	282	Protein SSM1, putative nucleotide phosphatase; sup	99.94
3kbb_A	216	Phosphorylated carbohydrates phosphatase TM_1254;	99.94
3dv9_A	247	Beta-phosphoglucomutase; structural genomics, APC6	99.94
4gib_A	250	Beta-phosphoglucomutase; rossmann fold, HAD-like,	99.94
3ed5_A	238	YFNB; APC60080, bacillus subtilis subsp. subtilis	99.94
2ah5_A	210	COG0546: predicted phosphatases; MCSG, structural	99.94
3s6j_A	233	Hydrolase, haloacid dehalogenase-like family; stru	99.94
3qxg_A	243	Inorganic pyrophosphatase; hydrolase, magnesium bi	99.94
3kzx_A	231	HAD-superfamily hydrolase, subfamily IA, variant;	99.93
3mc1_A	226	Predicted phosphatase, HAD family; PSI2, NYSGXRC,	99.93
2gfh_A	260	Haloacid dehalogenase-like hydrolase domain conta;	99.93
3e58_A	214	Putative beta-phosphoglucomutase; structu genomics	99.93
3smv_A	240	S-(-)-azetidine-2-carboxylate hydrolase; haloacid	99.93
4eek_A	259	Beta-phosphoglucomutase-related protein; hydrolase	99.93
2pib_A	216	Phosphorylated carbohydrates phosphatase TM_1254;	99.93
3um9_A	230	Haloacid dehalogenase, type II; haloacid dehalogen	99.93
3qnm_A	240	Haloacid dehalogenase-like hydrolase; structural g	99.93
4g9b_A	243	Beta-PGM, beta-phosphoglucomutase; HAD, putative p	99.93
2hi0_A	240	Putative phosphoglycolate phosphatase; YP_619066.1	99.93
4ex6_A	237	ALNB; modified rossman fold, phosphatase, magnesiu	99.93
3umc_A	254	Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeru	99.92
3umg_A	254	Haloacid dehalogenase; defluorinase, hydrolase; 2.	99.92
2hdo_A	209	Phosphoglycolate phosphatase; NP_784602.1, structu	99.92
3umb_A	233	Dehalogenase-like hydrolase; 2.20A {Ralstonia sola	99.92
2no4_A	240	(S)-2-haloacid dehalogenase IVA; HAD superfamily,	99.92
3iru_A	277	Phoshonoacetaldehyde hydrolase like protein; phosp	99.92
2hoq_A	241	Putative HAD-hydrolase PH1655; haloacid dehalogena	99.92
2fdr_A	229	Conserved hypothetical protein; SAD, structural ge	99.92
3u26_A	234	PF00702 domain protein; structural genomics, PSI-b	99.92
2om6_A	235	Probable phosphoserine phosphatase; rossmann fold,	99.92
3m9l_A	205	Hydrolase, haloacid dehalogenase-like family; HAD	99.92
3sd7_A	240	Putative phosphatase; structural genomics, haloaci	99.92
1zrn_A	232	L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseud	99.92
3l5k_A	250	Protein GS1, haloacid dehalogenase-like hydrolase	99.91
2nyv_A	222	Pgpase, PGP, phosphoglycolate phosphatase; structu	99.91
1qq5_A	253	Protein (L-2-haloacid dehalogenase); hydrolase; 1.	99.91
2pke_A	251	Haloacid delahogenase-like family hydrolase; NP_63	99.91
1swv_A	267	Phosphonoacetaldehyde hydrolase; HAD enzyme superf	99.91
2go7_A	207	Hydrolase, haloacid dehalogenase-like family; stru	99.91
3nas_A	233	Beta-PGM, beta-phosphoglucomutase; PSI, structural	99.91
3k1z_A	263	Haloacid dehalogenase-like hydrolase domain-conta	99.91
3vay_A	230	HAD-superfamily hydrolase; rossmann fold, haloacid	99.91
3ddh_A	234	Putative haloacid dehalogenase-like family hydrol;	99.91
2hsz_A	243	Novel predicted phosphatase; structural genomics,	99.91
3d6j_A	225	Putative haloacid dehalogenase-like hydrolase; str	99.9
2hcf_A	234	Hydrolase, haloacid dehalogenase-like family; NP_6	99.9
1te2_A	226	Putative phosphatase; structural genomics, phospha	99.9
2wf7_A	221	Beta-PGM, beta-phosphoglucomutase; transition stat	99.9
2zg6_A	220	Putative uncharacterized protein ST2620, probable	99.89
2w43_A	201	Hypothetical 2-haloalkanoic acid dehalogenase; hyd	99.89
3cnh_A	200	Hydrolase family protein; NP_295428.1, predicted h	99.88
4dcc_A	229	Putative haloacid dehalogenase-like hydrolase; mag	99.87
2qlt_A	275	(DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, sac	99.87
3ib6_A	189	Uncharacterized protein; structural genomics, unkn	99.86
1yns_A	261	E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo	99.86
2fi1_A	190	Hydrolase, haloacid dehalogenase-like family; stru	99.86
2oda_A	196	Hypothetical protein pspto_2114; haloacid dehaloge	99.86
2g80_A	253	Protein UTR4; YEL038W, UTR4 protein (unknown trans	99.85
3m1y_A	217	Phosphoserine phosphatase (SERB); NYSGXRC, PSI II,	99.85
2i6x_A	211	Hydrolase, haloacid dehalogenase-like family; HAD	99.85
3l8h_A	179	Putative haloacid dehalogenase-like hydrolase; HAD	99.84
2p11_A	231	Hypothetical protein; putative haloacid dehalogena	99.83
2gmw_A	211	D,D-heptose 1,7-bisphosphate phosphatase; Zn-bindi	99.83
1rku_A	206	Homoserine kinase; phosphoserine phosphatase, phos	99.81
1l7m_A	211	Phosphoserine phosphatase; rossmann fold, four-hel	99.81
1nnl_A	225	L-3-phosphoserine phosphatase; PSP, HPSP, phospho-	99.81
2b0c_A	206	Putative phosphatase; alpha-D-glucose-1-phosphate,	99.81
2ho4_A	259	Haloacid dehalogenase-like hydrolase domain contai	99.8
2c4n_A	250	Protein NAGD; nucleotide phosphatase, HAD superfam	99.8
4eze_A	317	Haloacid dehalogenase-like hydrolase; magnesium bi	99.79
4ap9_A	201	Phosphoserine phosphatase; hydrolase, haloacid deh	99.79
3p96_A	415	Phosphoserine phosphatase SERB; ssgcid, structural	99.77
1yv9_A	264	Hydrolase, haloacid dehalogenase family; hypotheti	99.76
3kd3_A	219	Phosphoserine phosphohydrolase-like protein; csgid	99.76
2fea_A	236	2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate	99.75
1vjr_A	271	4-nitrophenylphosphatase; TM1742, structural genom	99.75
3i28_A	555	Epoxide hydrolase 2; aromatic hydrocarbons catabol	99.75
2o2x_A	218	Hypothetical protein; structural genomics, joint c	99.74
3fvv_A	232	Uncharacterized protein; unknown function, structu	99.74
4dw8_A	279	Haloacid dehalogenase-like hydrolase; HAD, putativ	99.74
2x4d_A	271	HLHPP, phospholysine phosphohistidine inorganic py	99.72
2pr7_A	137	Haloacid dehalogenase/epoxide hydrolase family; NP	99.72
2wm8_A	187	MDP-1, magnesium-dependent phosphatase 1; haloacid	99.72
3n28_A	335	Phosphoserine phosphatase; HAD family hydrolase, s	99.71
3e8m_A	164	Acylneuraminate cytidylyltransferase; 2-keto-3-deo	99.71
3mmz_A	176	Putative HAD family hydrolase; structural genomics	99.71
3mn1_A	189	Probable YRBI family phosphatase; structural genom	99.7
2p9j_A	162	Hypothetical protein AQ2171; secsg, riken, PSI, st	99.7
3dnp_A	290	Stress response protein YHAX; structural PSI-2, pr	99.7
3pdw_A	266	Uncharacterized hydrolase YUTF; structural genomic	99.7
3gyg_A	289	NTD biosynthesis operon putative hydrolase NTDB; P	99.7
3ij5_A	211	3-deoxy-D-manno-octulosonate 8-phosphate phosphat;	99.7
2oyc_A	306	PLP phosphatase, pyridoxal phosphate phosphatase;	99.68
1qyi_A	384	ZR25, hypothetical protein; structural genomics, P	99.67
1zjj_A	263	Hypothetical protein PH1952; alpha/beta hydrolase	99.67
3fzq_A	274	Putative hydrolase; YP_001086940.1, putative haloa	99.67
2fpr_A	176	Histidine biosynthesis bifunctional protein HISB;	99.67
2hx1_A	284	Predicted sugar phosphatases of the HAD superfamil	99.67
1k1e_A	180	Deoxy-D-mannose-octulosonate 8-phosphate phosphat;	99.66
3epr_A	264	Hydrolase, haloacid dehalogenase-like family; stru	99.66
3l7y_A	304	Putative uncharacterized protein SMU.1108C; hydrol	99.66
3n07_A	195	3-deoxy-D-manno-octulosonate 8-phosphate phosphat;	99.65
3mpo_A	279	Predicted hydrolase of the HAD superfamily; SGX, P	99.65
3a1c_A	287	Probable copper-exporting P-type ATPase A; ATP-bin	99.65
1wr8_A	231	Phosphoglycolate phosphatase; alpha / beta core do	99.65
3n1u_A	191	Hydrolase, HAD superfamily, subfamily III A; struc	99.64
3skx_A	280	Copper-exporting P-type ATPase B; P1B-ATPase, ATP	99.64
3qgm_A	268	P-nitrophenyl phosphatase (PHO2); structural genom	99.63
2r8e_A	188	3-deoxy-D-manno-octulosonate 8-phosphate phosphata	99.63
1q92_A	197	5(3)-deoxyribonucleotidase; alpha-beta rossman fol	99.62
3dao_A	283	Putative phosphatse; structural genomics, joint ce	99.62
2rbk_A	261	Putative uncharacterized protein; HAD-like phospha	99.62
2i7d_A	193	5'(3')-deoxyribonucleotidase, cytosolic type; hydr	99.61
2pq0_A	258	Hypothetical conserved protein GK1056; hyopthetica	99.6
2b82_A	211	APHA, class B acid phosphatase; DDDD acid phosphat	99.6
3pgv_A	285	Haloacid dehalogenase-like hydrolase; structural g	99.59
3r4c_A	268	Hydrolase, haloacid dehalogenase-like hydrolase; h	99.57
3ewi_A	168	N-acylneuraminate cytidylyltransferase; beta barre	99.55
1rlm_A	271	Phosphatase; HAD family, rossman fold, hydrolase;	99.55
3bwv_A	180	Putative 5'(3')-deoxyribonucleotidase; NP_764060.1	99.55
3zvl_A	416	Bifunctional polynucleotide phosphatase/kinase; hy	99.54
2yj3_A	263	Copper-transporting ATPase; hydrolase, P-type ATPa	99.28
1nrw_A	288	Hypothetical protein, haloacid dehalogenase-like h	99.43
1rkq_A	282	Hypothetical protein YIDA; two domain structure wi	99.42
1l6r_A	227	Hypothetical protein TA0175; structural genomics,	99.41
2b30_A	301	Pvivax hypothetical protein; SGPP, structural geno	99.4
3zx4_A	259	MPGP, mannosyl-3-phosphoglycerate phosphatase; hyd	99.38
3nvb_A	387	Uncharacterized protein; protein FKBH, protein fkb	99.34
1nf2_A	268	Phosphatase; structural proteomics, HAD NEW fold,	99.3
2i33_A	258	Acid phosphatase; HAD superfamily, hydrolase; 1.57	99.28
1y8a_A	332	Hypothetical protein AF1437; structural genomics,	99.25
3kc2_A	352	Uncharacterized protein YKR070W; HAD-like, mitocho	99.23
1ltq_A	301	Polynucleotide kinase; phosphatase, alpha/beta, P-	99.11
1xvi_A	275	MPGP, YEDP, putative mannosyl-3-phosphoglycerate p	99.06
2zos_A	249	MPGP, mannosyl-3-phosphoglycerate phosphatase; hal	99.0
3ocu_A	262	Lipoprotein E; hydrolase, outer membrane; HET: NMN	98.88
3pct_A	260	Class C acid phosphatase; hydrolase, outer membran	98.88
1u02_A	239	Trehalose-6-phosphate phosphatase related protein;	98.82
4fe3_A	297	Cytosolic 5'-nucleotidase 3; substrate complex, HA	98.62
2hhl_A	195	CTD small phosphatase-like protein; CTD phosphatas	98.59
2ght_A	181	Carboxy-terminal domain RNA polymerase II polypept	98.57
3f9r_A	246	Phosphomannomutase; trypanosome glycobiology struc	98.46
3j08_A	645	COPA, copper-exporting P-type ATPase A; copper tra	98.41
4gxt_A	385	A conserved functionally unknown protein; structur	98.31
2jc9_A	555	Cytosolic purine 5'-nucleotidase; cytosolic 5-prim	98.26
3j09_A	723	COPA, copper-exporting P-type ATPase A; copper tra	98.26
1s2o_A	244	SPP, sucrose-phosphatase; phosphohydrolase, HAD su	98.17
4g63_A	470	Cytosolic IMP-GMP specific 5'-nucleotidase; struct	98.06
3rfu_A	736	Copper efflux ATPase; alpha helical, CPC, CXXC, AT	97.97
3qle_A	204	TIM50P; chaperone, mitochondrion, preprotein trans	97.85
3ar4_A	995	Sarcoplasmic/endoplasmic reticulum calcium ATPase;	97.82
3ef0_A	372	RNA polymerase II subunit A C-terminal domain phos	97.68
2zxe_A	1028	Na, K-ATPase alpha subunit; membrane protein, ION	97.51
1mhs_A	920	Proton pump, plasma membrane ATPase; ION transport	97.44
3ixz_A	1034	Potassium-transporting ATPase alpha; ION pump, H+,	97.31
4as2_A	327	Phosphorylcholine phosphatase; hydrolase, HAD supe	97.09
2fue_A	262	PMM 1, PMMH-22, phosphomannomutase 1; enzyme-produ	97.03
3b8c_A	885	ATPase 2, plasma membrane-type; P-type ATPase, pro	96.75
1xpj_A	126	Hypothetical protein; structural genomics, MCSG, p	96.44
3shq_A	320	UBLCP1; phosphatase, hydrolase; 1.96A {Drosophila	96.43
2amy_A	246	PMM 2, phosphomannomutase 2; HS.459855, HS.313504,	96.32
2amy_A	246	PMM 2, phosphomannomutase 2; HS.459855, HS.313504,	95.97
2obb_A	142	Hypothetical protein; structural genomics, PSI-2,	95.78
2fue_A	262	PMM 1, PMMH-22, phosphomannomutase 1; enzyme-produ	95.64
1s2o_A	244	SPP, sucrose-phosphatase; phosphohydrolase, HAD su	92.88
3geb_A	274	EYES absent homolog 2; hydrolase, activator, alter	91.94
3ef1_A	442	RNA polymerase II subunit A C-terminal domain phos	87.99
2jc9_A	555	Cytosolic purine 5'-nucleotidase; cytosolic 5-prim	81.95

>3nuq_A Protein SSM1, putative nucleotide phosphatase; suppresses the 6-AU sensitivity of transcription elongation II; 1.70A {Saccharomyces cerevisiae} PDB: 3onn_A 3opx_A*

Probab=99.94  E-value=3.9e-26  Score=204.70  Aligned_cols=214  Identities=29%  Similarity=0.489  Sum_probs=171.8

Q ss_pred             cCccEEEEeCCCCccCCCccHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHhCCCHHHHHHccCCCChhhHHHHhhc
Q 022360           12 AKYDCLLFDLDDTLYPYSSGIAAACGQNIKDYMVEKLGIERSKIEDLGNLLYKNYGTTMAGLRAIGYDFDYDDYHSFVHG   91 (298)
Q Consensus        12 ~~~k~viFDlDGTL~d~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~   91 (298)
                      .++|+|+||+||||+++...+...+...+..++.+..++...........++..++.....+.. ....+...+...+..
T Consensus        55 ~~~k~i~FDlDGTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~~~~~~~~  133 (282)
T 3nuq_A           55 PNLKVFFFDIDNCLYKSSTRIHDLMQQSILRFFQTHLKLSPEDAHVLNNSYYKEYGLAIRGLVM-FHKVNALEYNRLVDD  133 (282)
T ss_dssp             CCCCEEEECCTTTTSCCCHHHHHHHHHHHHHHHHHCTTSCHHHHHHHHHHHHHHTHHHHHHHHH-TTSSCHHHHHHHHTT
T ss_pred             CCCCEEEEecCCCcccCCccHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHhhhHHHHHH-HcCCCHHHHHHHHhh
Confidence            4579999999999999998999999999988888888888877776666666666655554432 234456677766655


Q ss_pred             ccC-CCCCCCChhHHHHHHhCC---C--cEEEEeCCChHHHHHHHHHhCCCCccceeEeecCCCCCCCCCCCCChhhHHH
Q 022360           92 RLP-YENLKPDPVLRSLLLSLP---L--RKIIFTNADKVHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSDDEDDIAF  165 (298)
Q Consensus        92 ~~~-~~~~~~~~g~~~~L~~l~---~--~~~ivS~~~~~~~~~~l~~l~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~  165 (298)
                      ... .....++||+.++|+.++   +  +++|+|++....++..++.+++..+|+.+++++..+..              
T Consensus       134 ~~~~~~~~~~~p~~~~~L~~L~~~g~~~~l~i~Tn~~~~~~~~~l~~~gl~~~fd~v~~~~~~~~~--------------  199 (282)
T 3nuq_A          134 SLPLQDILKPDIPLRNMLLRLRQSGKIDKLWLFTNAYKNHAIRCLRLLGIADLFDGLTYCDYSRTD--------------  199 (282)
T ss_dssp             TSCGGGTCCCCHHHHHHHHHHHHSSSCSEEEEECSSCHHHHHHHHHHHTCTTSCSEEECCCCSSCS--------------
T ss_pred             hhhhhhccCcChhHHHHHHHHHhCCCCceEEEEECCChHHHHHHHHhCCcccccceEEEeccCCCc--------------
Confidence            332 245788999999998874   7  89999999999999999999999999999987655320              


Q ss_pred             HHhhhcccCCCCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCCC-CcEEEEcCCccchHHHHHcCC
Q 022360          166 VESAASTTTSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINP-QRTLFFEDSVRNIQAGKRVGL  244 (298)
Q Consensus       166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~p-~~~i~iGDs~~Di~~a~~aG~  244 (298)
                                                      ..    .+||++.+++.+++++|++| ++|++|||+.||+.||+++|+
T Consensus       200 --------------------------------~~----~~Kp~~~~~~~~~~~lgi~~~~~~i~vGD~~~Di~~a~~aG~  243 (282)
T 3nuq_A          200 --------------------------------TL----VCKPHVKAFEKAMKESGLARYENAYFIDDSGKNIETGIKLGM  243 (282)
T ss_dssp             --------------------------------SC----CCTTSHHHHHHHHHHHTCCCGGGEEEEESCHHHHHHHHHHTC
T ss_pred             --------------------------------cc----CCCcCHHHHHHHHHHcCCCCcccEEEEcCCHHHHHHHHHCCC
Confidence                                            00    26999999999999999999 999999999999999999999


Q ss_pred             e-EEEecCCCC------CCCCCEEeCCHHHHHHHhHHhh
Q 022360          245 D-TVLIGKSQR------VKGADYAFESIHNIKEAIPELW  276 (298)
Q Consensus       245 ~-~v~v~~~~~------~~~ad~i~~s~~~l~~~l~~~~  276 (298)
                      + ++++..+..      ...++++++++.+|.++|++++
T Consensus       244 ~~~~~~~~~~~~~~~~~~~~ad~vi~sl~el~~~l~~lf  282 (282)
T 3nuq_A          244 KTCIHLVENEVNEILGQTPEGAIVISDILELPHVVSDLF  282 (282)
T ss_dssp             SEEEEECSCCC----CCCCTTCEEESSGGGGGGTSGGGC
T ss_pred             eEEEEEcCCccccccccCCCCCEEeCCHHHHHHHhhhhC
Confidence            5 455555542      4588999999999999988764

>3kbb_A Phosphorylated carbohydrates phosphatase TM_1254; hydrolase, arbohydrate metabolism, COBA magnesium, manganese, metal-binding, nickel; HET: MSE GOL; 1.74A {Thermotoga maritima MSB8}

Probab=99.94  E-value=5.5e-27  Score=201.64  Aligned_cols=198  Identities=21%  Similarity=0.274  Sum_probs=145.4

Q ss_pred             ccEEEEeCCCCccCCCccHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHhCCCHHHH-----HHccCCCChhhHHHH
Q 022360           14 YDCLLFDLDDTLYPYSSGIAAACGQNIKDYMVEKLGIERSKIEDLGNLLYKNYGTTMAGL-----RAIGYDFDYDDYHSF   88 (298)
Q Consensus        14 ~k~viFDlDGTL~d~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~-----~~~~~~~~~~~~~~~   88 (298)
                      ||+|+||+||||+|+...+..++.+     +.+.+|++.....     .....|......     .........+.+...
T Consensus         1 IkAViFD~DGTL~ds~~~~~~a~~~-----~~~~~g~~~~~~~-----~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~   70 (216)
T 3kbb_A            1 MEAVIFDMDGVLMDTEPLYFEAYRR-----VAESYGKPYTEDL-----HRRIMGVPEREGLPILMEALEIKDSLENFKKR   70 (216)
T ss_dssp             CCEEEEESBTTTBCCGGGHHHHHHH-----HHHHTTCCCCHHH-----HHHHTTSCHHHHHHHHHHHTTCCSCHHHHHHH
T ss_pred             CeEEEECCCCcccCCHHHHHHHHHH-----HHHHcCCCCCHHH-----HHHHhccchhhhhhhhhhcccchhhHHHHHHH
Confidence            6899999999999988888877775     4555676544321     112223332211     122223333333222


Q ss_pred             hhcc---cCCCCCCCChhHHHHHHhC---CCcEEEEeCCChHHHHHHHHHhCCCCccceeEeecCCCCCCCCCCCCChhh
Q 022360           89 VHGR---LPYENLKPDPVLRSLLLSL---PLRKIIFTNADKVHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSDDEDD  162 (298)
Q Consensus        89 ~~~~---~~~~~~~~~~g~~~~L~~l---~~~~~ivS~~~~~~~~~~l~~l~l~~~f~~i~~~~~~~~~~~~~~~~~~~~  162 (298)
                      +.+.   .......++||+.++|+.|   +++++++||+....+...++.+++.++|+.++++++++.            
T Consensus        71 ~~~~~~~~~~~~~~~~pg~~~~l~~L~~~g~~~~i~tn~~~~~~~~~l~~~~l~~~fd~~~~~~~~~~------------  138 (216)
T 3kbb_A           71 VHEEKKRVFSELLKENPGVREALEFVKSKRIKLALATSTPQREALERLRRLDLEKYFDVMVFGDQVKN------------  138 (216)
T ss_dssp             HHHHHHHHHHHHCCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGCSEEECGGGSSS------------
T ss_pred             HHHHHHHHHHHhcccCccHHHHHHHHHHcCCCcccccCCcHHHHHHHHHhcCCCccccccccccccCC------------
Confidence            2111   1113457789999998876   588999999999999999999999999999999998876            


Q ss_pred             HHHHHhhhcccCCCCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHHc
Q 022360          163 IAFVESAASTTTSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRV  242 (298)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a~~a  242 (298)
                                                                +||+|++|..+++++|++|++|++|||+.+|+.+|+++
T Consensus       139 ------------------------------------------~KP~p~~~~~a~~~lg~~p~e~l~VgDs~~Di~aA~~a  176 (216)
T 3kbb_A          139 ------------------------------------------GKPDPEIYLLVLERLNVVPEKVVVFEDSKSGVEAAKSA  176 (216)
T ss_dssp             ------------------------------------------CTTSTHHHHHHHHHHTCCGGGEEEEECSHHHHHHHHHT
T ss_pred             ------------------------------------------CcccHHHHHHHHHhhCCCccceEEEecCHHHHHHHHHc
Confidence                                                      79999999999999999999999999999999999999


Q ss_pred             CCeEEE-ecCCCC------CCCCCEEeCCHHHHHHHhHHhh
Q 022360          243 GLDTVL-IGKSQR------VKGADYAFESIHNIKEAIPELW  276 (298)
Q Consensus       243 G~~~v~-v~~~~~------~~~ad~i~~s~~~l~~~l~~~~  276 (298)
                      |+.+++ +.++..      ..+++.+ .++++|.+.|++|+
T Consensus       177 G~~~i~~v~~g~~~~~~l~~~~~~~i-~~~~eli~~l~eLL  216 (216)
T 3kbb_A          177 GIERIYGVVHSLNDGKALLEAGAVAL-VKPEEILNVLKEVL  216 (216)
T ss_dssp             TCCCEEEECCSSSCCHHHHHTTCSEE-ECGGGHHHHHHHHC
T ss_pred             CCcEEEEecCCCCCHHHHHhCCCcEE-CCHHHHHHHHHHHC
Confidence            999986 555542      2345544 46789988888874

>3dv9_A Beta-phosphoglucomutase; structural genomics, APC60149, PSI- protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.72A {Bacteroides vulgatus}

Probab=99.94  E-value=5.8e-26  Score=197.87  Aligned_cols=206  Identities=19%  Similarity=0.292  Sum_probs=152.0

Q ss_pred             ccccccCccEEEEeCCCCccCCCccHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHhCCCHHH----H--HHccCCC
Q 022360            7 YRMAAAKYDCLLFDLDDTLYPYSSGIAAACGQNIKDYMVEKLGIERSKIEDLGNLLYKNYGTTMAG----L--RAIGYDF   80 (298)
Q Consensus         7 ~~~~~~~~k~viFDlDGTL~d~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~----~--~~~~~~~   80 (298)
                      ..|.++++|+|+||+||||+++...+..++...     .+..|+......     .....|.....    +  ...+...
T Consensus        16 ~~~~~~~~k~i~fDlDGTL~d~~~~~~~~~~~~-----~~~~g~~~~~~~-----~~~~~g~~~~~~~~~~~~~~~~~~~   85 (247)
T 3dv9_A           16 HGYESIDLKAVLFDMDGVLFDSMPNHAESWHKI-----MKRFGFGLSREE-----AYMHEGRTGASTINIVSRRERGHDA   85 (247)
T ss_dssp             HTCSCCCCCEEEEESBTTTBCCHHHHHHHHHHH-----HHHTTCCCCHHH-----HHHTTTSCHHHHHHHHHHHHHSSCC
T ss_pred             ccCCCCCCCEEEECCCCccCcCHHHHHHHHHHH-----HHHcCCCCCHHH-----HHHHhCCChHHHHHHHHHHhcCCCC
Confidence            345567799999999999999887777777653     344566543321     12222332111    1  1134444


Q ss_pred             ChhhHHHHhhcc---c-CCCCCCCChhHHHHHHhCC---CcEEEEeCCChHHHHHHHHHhCCCCcc--ceeEeecCCCCC
Q 022360           81 DYDDYHSFVHGR---L-PYENLKPDPVLRSLLLSLP---LRKIIFTNADKVHAVKVLSRLGLEDCF--EGIICFETLNPT  151 (298)
Q Consensus        81 ~~~~~~~~~~~~---~-~~~~~~~~~g~~~~L~~l~---~~~~ivS~~~~~~~~~~l~~l~l~~~f--~~i~~~~~~~~~  151 (298)
                      +.+.+.......   . ......++||+.++|+.++   ++++++|++....+...++. ++..+|  +.++++++.+. 
T Consensus        86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~-~l~~~f~~~~~~~~~~~~~-  163 (247)
T 3dv9_A           86 TEEEIKAIYQAKTEEFNKCPKAERMPGALEVLTKIKSEGLTPMVVTGSGQTSLLDRLNH-NFPGIFQANLMVTAFDVKY-  163 (247)
T ss_dssp             CHHHHHHHHHHHHHHHTTSCCCCBCTTHHHHHHHHHHTTCEEEEECSCC---CHHHHHH-HSTTTCCGGGEECGGGCSS-
T ss_pred             CHHHHHHHHHHHHHHHHhcccCCCCCCHHHHHHHHHHcCCcEEEEcCCchHHHHHHHHh-hHHHhcCCCeEEecccCCC-
Confidence            444433322110   0 1234678899999988774   78999999998888888988 999999  88998887664 


Q ss_pred             CCCCCCCChhhHHHHHhhhcccCCCCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcC
Q 022360          152 HKNTVSDDEDDIAFVESAASTTTSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFED  231 (298)
Q Consensus       152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~p~~~i~iGD  231 (298)
                                                                           +||+|.+++.+++++|++|++|++|||
T Consensus       164 -----------------------------------------------------~kp~~~~~~~~~~~lg~~~~~~i~vGD  190 (247)
T 3dv9_A          164 -----------------------------------------------------GKPNPEPYLMALKKGGFKPNEALVIEN  190 (247)
T ss_dssp             -----------------------------------------------------CTTSSHHHHHHHHHHTCCGGGEEEEEC
T ss_pred             -----------------------------------------------------CCCCCHHHHHHHHHcCCChhheEEEeC
Confidence                                                                 799999999999999999999999999


Q ss_pred             CccchHHHHHcCCeEEEecCCCC------CCCCCEEeCCHHHHHHHhHHhhc
Q 022360          232 SVRNIQAGKRVGLDTVLIGKSQR------VKGADYAFESIHNIKEAIPELWE  277 (298)
Q Consensus       232 s~~Di~~a~~aG~~~v~v~~~~~------~~~ad~i~~s~~~l~~~l~~~~~  277 (298)
                      +.||++||+++|+.++++.++..      ...|+++++++.+|.++|++++.
T Consensus       191 ~~~Di~~a~~aG~~~i~v~~~~~~~~~l~~~~ad~v~~~~~el~~~l~~~~~  242 (247)
T 3dv9_A          191 APLGVQAGVAAGIFTIAVNTGPLHDNVLLNEGANLLFHSMPDFNKNWETLQS  242 (247)
T ss_dssp             SHHHHHHHHHTTSEEEEECCSSSCHHHHHTTTCSEEESSHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHCCCeEEEEcCCCCCHHHHHhcCCCEEECCHHHHHHHHHHHHH
Confidence            99999999999999999987653      34899999999999999998865

>4gib_A Beta-phosphoglucomutase; rossmann fold, HAD-like, structural genomics, center for structural genomics of infectious DISE csgid, isomerase; 2.27A {Clostridium difficile}

Probab=99.94  E-value=1.2e-26  Score=205.50  Aligned_cols=207  Identities=20%  Similarity=0.236  Sum_probs=139.6

Q ss_pred             ccccccccCccEEEEeCCCCccCCCccHHHHHHHHHHHHHHHHhCCChhHH----------HHHHHHHHHHhCCC----H
Q 022360            5 GRYRMAAAKYDCLLFDLDDTLYPYSSGIAAACGQNIKDYMVEKLGIERSKI----------EDLGNLLYKNYGTT----M   70 (298)
Q Consensus         5 ~~~~~~~~~~k~viFDlDGTL~d~~~~~~~~~~~~~~~~~~~~~g~~~~~~----------~~~~~~~~~~~g~~----~   70 (298)
                      +.|.+...|+|+|+||+||||+|+...+..++..     +.++.|++....          ......+.......    .
T Consensus        17 ~~~~~~~~MIKaViFDlDGTLvDs~~~~~~a~~~-----~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~   91 (250)
T 4gib_A           17 NLYFQSNAMIEAFIFDLDGVITDTAYYHYMAWRK-----LAHKVGIDIDTKFNESLKGISRMESLDRILEFGNKKYSFSE   91 (250)
T ss_dssp             -------CCCCEEEECTBTTTBCCHHHHHHHHHH-----HHHTTTCCCCTTGGGGTTTCCHHHHHHHHHHHTTCTTTSCH
T ss_pred             CcccCccchhheeeecCCCcccCCHHHHHHHHHH-----HHHHcCCCCCHHHHHHHhCcchHHHHHHhhhhhcCCCCCCH
Confidence            3445556679999999999999987777777665     445556643221          01111111111110    0


Q ss_pred             HHHHHccCCCChhhHHHHhhcccCCCCCCCChhHHHHHHhCC---CcEEEEeCCChHHHHHHHHHhCCCCccceeEeecC
Q 022360           71 AGLRAIGYDFDYDDYHSFVHGRLPYENLKPDPVLRSLLLSLP---LRKIIFTNADKVHAVKVLSRLGLEDCFEGIICFET  147 (298)
Q Consensus        71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~L~~l~---~~~~ivS~~~~~~~~~~l~~l~l~~~f~~i~~~~~  147 (298)
                      .....+. ......+......   .....++||+.++|+.|+   +++++.|+..  .....++++|+.++|+.++++++
T Consensus        92 ~~~~~~~-~~~~~~~~~~~~~---~~~~~~~p~~~~ll~~Lk~~g~~i~i~~~~~--~~~~~L~~~gl~~~Fd~i~~~~~  165 (250)
T 4gib_A           92 EEKVRMA-EEKNNYYVSLIDE---ITSNDILPGIESLLIDVKSNNIKIGLSSASK--NAINVLNHLGISDKFDFIADAGK  165 (250)
T ss_dssp             HHHHHHH-HHHHHHHHHHHTT---CCGGGSCTTHHHHHHHHHHTTCEEEECCSCT--THHHHHHHHTCGGGCSEECCGGG
T ss_pred             HHHHHHH-HHHHHHHHHHHhh---ccccccchhHHHHHHHHHhcccccccccccc--hhhhHhhhcccccccceeecccc
Confidence            0000000 0000011111111   123467899999988875   5566655543  45678999999999999999998


Q ss_pred             CCCCCCCCCCCChhhHHHHHhhhcccCCCCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEE
Q 022360          148 LNPTHKNTVSDDEDDIAFVESAASTTTSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTL  227 (298)
Q Consensus       148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~p~~~i  227 (298)
                      ++.                                                      +||+|++|..+++++|++|++|+
T Consensus       166 ~~~------------------------------------------------------~KP~p~~~~~a~~~lg~~p~e~l  191 (250)
T 4gib_A          166 CKN------------------------------------------------------NKPHPEIFLMSAKGLNVNPQNCI  191 (250)
T ss_dssp             CCS------------------------------------------------------CTTSSHHHHHHHHHHTCCGGGEE
T ss_pred             cCC------------------------------------------------------CCCcHHHHHHHHHHhCCChHHeE
Confidence            875                                                      79999999999999999999999


Q ss_pred             EEcCCccchHHHHHcCCeEEEecCCCCCCCCCEEeCCHHHH-HHHhHHhh
Q 022360          228 FFEDSVRNIQAGKRVGLDTVLIGKSQRVKGADYAFESIHNI-KEAIPELW  276 (298)
Q Consensus       228 ~iGDs~~Di~~a~~aG~~~v~v~~~~~~~~ad~i~~s~~~l-~~~l~~~~  276 (298)
                      +|||+.+|+++|+++|+.+++++.......||++++++.+| .+.|.+.+
T Consensus       192 ~VGDs~~Di~aA~~aG~~~i~v~~~~~~~~ad~vi~~l~eL~~~~i~~~~  241 (250)
T 4gib_A          192 GIEDASAGIDAINSANMFSVGVGNYENLKKANLVVDSTNQLKFEYIQEKY  241 (250)
T ss_dssp             EEESSHHHHHHHHHTTCEEEEESCTTTTTTSSEEESSGGGCCHHHHHHHH
T ss_pred             EECCCHHHHHHHHHcCCEEEEECChhHhccCCEEECChHhCCHHHHHHHH
Confidence            99999999999999999999998877778899999999998 46666654

>3ed5_A YFNB; APC60080, bacillus subtilis subsp. subtilis STR. 168, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.72A {Bacillus subtilis} PDB: 3i76_A

Probab=99.94  E-value=1.7e-25  Score=193.53  Aligned_cols=204  Identities=23%  Similarity=0.260  Sum_probs=152.6

Q ss_pred             ccCccEEEEeCCCCccCCCccHHHHHHHHHHHHHHHHhCCChhHHHH-----HHHHHHHHh--CC-CH---------HHH
Q 022360           11 AAKYDCLLFDLDDTLYPYSSGIAAACGQNIKDYMVEKLGIERSKIED-----LGNLLYKNY--GT-TM---------AGL   73 (298)
Q Consensus        11 ~~~~k~viFDlDGTL~d~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~-----~~~~~~~~~--g~-~~---------~~~   73 (298)
                      ||++|+|+||+||||+++...+..++...     .++.|+.......     .....+..+  +. ..         ..+
T Consensus         4 mm~~k~i~fDlDGTL~d~~~~~~~~~~~~-----~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (238)
T 3ed5_A            4 MKRYRTLLFDVDDTILDFQAAEALALRLL-----FEDQNIPLTNDMKAQYKTINQGLWRAFEEGKMTRDEVVNTRFSALL   78 (238)
T ss_dssp             CCCCCEEEECCBTTTBCHHHHHHHHHHHH-----HHHTTCCCCHHHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHH
T ss_pred             cccCCEEEEcCcCcCcCCchhHHHHHHHH-----HHHcCCCcchHHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHH
Confidence            35689999999999999877777766653     4445665433211     111111111  11 11         112


Q ss_pred             HHccCCCChhhHHHHhhcccCCCCCCCChhHHHHHHhCC--CcEEEEeCCChHHHHHHHHHhCCCCccceeEeecCCCCC
Q 022360           74 RAIGYDFDYDDYHSFVHGRLPYENLKPDPVLRSLLLSLP--LRKIIFTNADKVHAVKVLSRLGLEDCFEGIICFETLNPT  151 (298)
Q Consensus        74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~L~~l~--~~~~ivS~~~~~~~~~~l~~l~l~~~f~~i~~~~~~~~~  151 (298)
                      ...+...+...+...+.... .....++|++.++|+.++  .+++++|++....++..++.+++..+|+.++++++.+. 
T Consensus        79 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~l~~~~~~~i~t~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~-  156 (238)
T 3ed5_A           79 KEYGYEADGALLEQKYRRFL-EEGHQLIDGAFDLISNLQQQFDLYIVTNGVSHTQYKRLRDSGLFPFFKDIFVSEDTGF-  156 (238)
T ss_dssp             HHTTCCCCHHHHHHHHHHHH-TTCCCBCTTHHHHHHHHHTTSEEEEEECSCHHHHHHHHHHTTCGGGCSEEEEGGGTTS-
T ss_pred             HHcCCCCcHHHHHHHHHHHH-HhcCCCCccHHHHHHHHHhcCeEEEEeCCCHHHHHHHHHHcChHhhhheEEEecccCC-
Confidence            33444444444444433322 234678999999998875  67899999999999999999999999999999987765 


Q ss_pred             CCCCCCCChhhHHHHHhhhcccCCCCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcC-CCCCcEEEEc
Q 022360          152 HKNTVSDDEDDIAFVESAASTTTSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIAS-INPQRTLFFE  230 (298)
Q Consensus       152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~-i~p~~~i~iG  230 (298)
                                                                           +||+|.++..+++++| ++|++|++||
T Consensus       157 -----------------------------------------------------~kp~~~~~~~~~~~~g~~~~~~~i~vG  183 (238)
T 3ed5_A          157 -----------------------------------------------------QKPMKEYFNYVFERIPQFSAEHTLIIG  183 (238)
T ss_dssp             -----------------------------------------------------CTTCHHHHHHHHHTSTTCCGGGEEEEE
T ss_pred             -----------------------------------------------------CCCChHHHHHHHHHcCCCChhHeEEEC
Confidence                                                                 7999999999999999 9999999999


Q ss_pred             CCc-cchHHHHHcCCeEEEecCCC----CCCCCCEEeCCHHHHHHHhHH
Q 022360          231 DSV-RNIQAGKRVGLDTVLIGKSQ----RVKGADYAFESIHNIKEAIPE  274 (298)
Q Consensus       231 Ds~-~Di~~a~~aG~~~v~v~~~~----~~~~ad~i~~s~~~l~~~l~~  274 (298)
                      |+. ||++||+++|+.+++++++.    .+..|++++.++.+|.++|.+
T Consensus       184 D~~~~Di~~a~~aG~~~i~~~~~~~~~~~~~~ad~v~~~~~el~~~l~~  232 (238)
T 3ed5_A          184 DSLTADIKGGQLAGLDTCWMNPDMKPNVPEIIPTYEIRKLEELYHILNI  232 (238)
T ss_dssp             SCTTTTHHHHHHTTCEEEEECTTCCCCTTCCCCSEEESSGGGHHHHHTC
T ss_pred             CCcHHHHHHHHHCCCEEEEECCCCCCCcccCCCCeEECCHHHHHHHHHh
Confidence            998 99999999999999997763    256899999999999988865

>2ah5_A COG0546: predicted phosphatases; MCSG, structural genomics, hydrola haloacid dehalogenase-like, PSI; 1.74A {Streptococcus pneumoniae} SCOP: c.108.1.6

Probab=99.94  E-value=5.1e-26  Score=195.80  Aligned_cols=195  Identities=18%  Similarity=0.240  Sum_probs=142.0

Q ss_pred             cCccEEEEeCCCCccCCCccHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHhCCCHHHHHHccCCC-ChhhH----H
Q 022360           12 AKYDCLLFDLDDTLYPYSSGIAAACGQNIKDYMVEKLGIERSKIEDLGNLLYKNYGTTMAGLRAIGYDF-DYDDY----H   86 (298)
Q Consensus        12 ~~~k~viFDlDGTL~d~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~-~~~~~----~   86 (298)
                      |++|+|+||+||||+|+...+..++...     .+..|++......    +....|............. ....+    .
T Consensus         2 M~~k~viFDlDGTL~d~~~~~~~~~~~~-----~~~~g~~~~~~~~----~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~   72 (210)
T 2ah5_A            2 TSITAIFFDLDGTLVDSSIGIHNAFTYT-----FKELGVPSPDAKT----IRGFMGPPLESSFATCLSKDQISEAVQIYR   72 (210)
T ss_dssp             TTCCEEEECSBTTTEECHHHHHHHHHHH-----HHHHTCCCCCHHH----HHHTSSSCHHHHHHTTSCGGGHHHHHHHHH
T ss_pred             CCCCEEEEcCCCcCccCHHHHHHHHHHH-----HHHcCCCCCCHHH----HHHHcCccHHHHHHHHcCHHHHHHHHHHHH
Confidence            4589999999999999877777776653     3444654322111    1222344433222111111 11122    2


Q ss_pred             HHhhcccCCCCCCCChhHHHHHHhC--CCcEEEEeCCChHHHHHHHHHhCCCCccceeEeecCCCCCCCCCCCCChhhHH
Q 022360           87 SFVHGRLPYENLKPDPVLRSLLLSL--PLRKIIFTNADKVHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSDDEDDIA  164 (298)
Q Consensus        87 ~~~~~~~~~~~~~~~~g~~~~L~~l--~~~~~ivS~~~~~~~~~~l~~l~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~  164 (298)
                      ...... ......++||+.++|+.|  +++++++||+....++..++++|+..+|+.+++++  +.              
T Consensus        73 ~~~~~~-~~~~~~~~~g~~~~l~~L~~~~~l~i~T~~~~~~~~~~l~~~gl~~~f~~i~~~~--~~--------------  135 (210)
T 2ah5_A           73 SYYKAK-GIYEAQLFPQIIDLLEELSSSYPLYITTTKDTSTAQDMAKNLEIHHFFDGIYGSS--PE--------------  135 (210)
T ss_dssp             HHHHHT-GGGSCEECTTHHHHHHHHHTTSCEEEEEEEEHHHHHHHHHHTTCGGGCSEEEEEC--SS--------------
T ss_pred             HHHHHh-ccCCCCCCCCHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHhcCchhheeeeecCC--CC--------------
Confidence            212111 112356789999988766  58899999999989999999999999999999876  43              


Q ss_pred             HHHhhhcccCCCCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHHcCC
Q 022360          165 FVESAASTTTSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGL  244 (298)
Q Consensus       165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a~~aG~  244 (298)
                                                              +||+|++|..+++++|++|++|++|||+.+|+++|+++|+
T Consensus       136 ----------------------------------------~Kp~p~~~~~~~~~lg~~p~~~~~vgDs~~Di~~a~~aG~  175 (210)
T 2ah5_A          136 ----------------------------------------APHKADVIHQALQTHQLAPEQAIIIGDTKFDMLGARETGI  175 (210)
T ss_dssp             ----------------------------------------CCSHHHHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTC
T ss_pred             ----------------------------------------CCCChHHHHHHHHHcCCCcccEEEECCCHHHHHHHHHCCC
Confidence                                                    7999999999999999999999999999999999999999


Q ss_pred             eEEEecCCCC------CCCCCEEeCCHHHHHHHh
Q 022360          245 DTVLIGKSQR------VKGADYAFESIHNIKEAI  272 (298)
Q Consensus       245 ~~v~v~~~~~------~~~ad~i~~s~~~l~~~l  272 (298)
                      .++++.++..      ...++++++++.+|.+.|
T Consensus       176 ~~i~v~~~~~~~~~l~~~~a~~v~~~~~el~~~l  209 (210)
T 2ah5_A          176 QKLAITWGFGEQADLLNYQPDYIAHKPLEVLAYF  209 (210)
T ss_dssp             EEEEESSSSSCHHHHHTTCCSEEESSTTHHHHHT
T ss_pred             cEEEEcCCCCCHHHHHhCCCCEEECCHHHHHHHh
Confidence            9999987653      246999999999987654

>3s6j_A Hydrolase, haloacid dehalogenase-like family; structural genomics, PSI-2; 2.20A {Pseudomonas syringae PV}

Probab=99.94  E-value=6e-26  Score=195.84  Aligned_cols=207  Identities=18%  Similarity=0.146  Sum_probs=149.9

Q ss_pred             ccccCccEEEEeCCCCccCCCccHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHhCCCHHHH-----HHccCCCChh
Q 022360            9 MAAAKYDCLLFDLDDTLYPYSSGIAAACGQNIKDYMVEKLGIERSKIEDLGNLLYKNYGTTMAGL-----RAIGYDFDYD   83 (298)
Q Consensus         9 ~~~~~~k~viFDlDGTL~d~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~-----~~~~~~~~~~   83 (298)
                      |.++++|+|+||+||||+++...+..++...     .+..|+......     +....|......     ...+...+.+
T Consensus         1 M~~~~~k~i~fDlDGTL~~~~~~~~~~~~~~-----~~~~g~~~~~~~-----~~~~~g~~~~~~~~~~~~~~~~~~~~~   70 (233)
T 3s6j_A            1 MSLRPQTSFIFDLDGTLTDSVYQNVAAWKEA-----LDAENIPLAMWR-----IHRKIGMSGGLMLKSLSRETGMSITDE   70 (233)
T ss_dssp             ----CCCEEEECCBTTTEECHHHHHHHHHHH-----HHHTTCCCCHHH-----HHHHTTSCHHHHHHHHHHC----CCHH
T ss_pred             CCCCcCcEEEEcCCCccccChHHHHHHHHHH-----HHHcCCCCCHHH-----HHHHcCCcHHHHHHHHHHhcCCCCCHH
Confidence            3455689999999999999877776666653     444566543321     222234432221     1222333333


Q ss_pred             hHHHHh---hccc--CCCCCCCChhHHHHHHhCC---CcEEEEeCCChHHHHHHHHHhCCCCccceeEeecCCCCCCCCC
Q 022360           84 DYHSFV---HGRL--PYENLKPDPVLRSLLLSLP---LRKIIFTNADKVHAVKVLSRLGLEDCFEGIICFETLNPTHKNT  155 (298)
Q Consensus        84 ~~~~~~---~~~~--~~~~~~~~~g~~~~L~~l~---~~~~ivS~~~~~~~~~~l~~l~l~~~f~~i~~~~~~~~~~~~~  155 (298)
                      .+....   ....  ......++|++.++|+.++   ++++++|++....++..++.+++..+|+.++++++.+.     
T Consensus        71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~-----  145 (233)
T 3s6j_A           71 QAERLSEKHAQAYERLQHQIIALPGAVELLETLDKENLKWCIATSGGIDTATINLKALKLDINKINIVTRDDVSY-----  145 (233)
T ss_dssp             HHHHHHHHHHHHHHHTGGGCEECTTHHHHHHHHHHTTCCEEEECSSCHHHHHHHHHTTTCCTTSSCEECGGGSSC-----
T ss_pred             HHHHHHHHHHHHHHHhhccCccCCCHHHHHHHHHHCCCeEEEEeCCchhhHHHHHHhcchhhhhheeeccccCCC-----
Confidence            322211   1100  1234678899999988874   78999999999999999999999999999999887664     


Q ss_pred             CCCChhhHHHHHhhhcccCCCCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccc
Q 022360          156 VSDDEDDIAFVESAASTTTSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRN  235 (298)
Q Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~D  235 (298)
                                                                       +||++.+++.+++++|++|++|++|||+.||
T Consensus       146 -------------------------------------------------~kp~~~~~~~~~~~l~~~~~~~i~iGD~~~D  176 (233)
T 3s6j_A          146 -------------------------------------------------GKPDPDLFLAAAKKIGAPIDECLVIGDAIWD  176 (233)
T ss_dssp             -------------------------------------------------CTTSTHHHHHHHHHTTCCGGGEEEEESSHHH
T ss_pred             -------------------------------------------------CCCChHHHHHHHHHhCCCHHHEEEEeCCHHh
Confidence                                                             7999999999999999999999999999999


Q ss_pred             hHHHHHcCCeEEEecCCCC------CCCCCEEeCCHHHHHHHhHHhhccC
Q 022360          236 IQAGKRVGLDTVLIGKSQR------VKGADYAFESIHNIKEAIPELWESD  279 (298)
Q Consensus       236 i~~a~~aG~~~v~v~~~~~------~~~ad~i~~s~~~l~~~l~~~~~~~  279 (298)
                      +.||+.+|+.++++.++..      ...|+++++++.+|.++|++....+
T Consensus       177 i~~a~~aG~~~i~v~~g~~~~~~l~~~~ad~v~~~~~el~~~l~~~~~~~  226 (233)
T 3s6j_A          177 MLAARRCKATGVGLLSGGYDIGELERAGALRVYEDPLDLLNHLDEIASRE  226 (233)
T ss_dssp             HHHHHHTTCEEEEEGGGSCCHHHHHHTTCSEEESSHHHHHHTGGGTCC--
T ss_pred             HHHHHHCCCEEEEEeCCCCchHhHHhcCCCEEECCHHHHHHHHHHHhhhc
Confidence            9999999999999977632      3459999999999999998765443

>3qxg_A Inorganic pyrophosphatase; hydrolase, magnesium binding site, NEW YORK research center for structural genomics; HET: TLA; 1.24A {Bacteroides thetaiotaomicron} PDB: 3qu2_A* 3qx7_A 3quq_A* 3r9k_A 3qut_A 3qu9_A* 3qu7_A 3qu5_A 3qyp_A 3quc_A 3qub_A 3qu4_A

Probab=99.94  E-value=9.5e-26  Score=197.31  Aligned_cols=203  Identities=21%  Similarity=0.323  Sum_probs=150.5

Q ss_pred             ccccCccEEEEeCCCCccCCCccHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHhCCCHHH----H--HHccCCCCh
Q 022360            9 MAAAKYDCLLFDLDDTLYPYSSGIAAACGQNIKDYMVEKLGIERSKIEDLGNLLYKNYGTTMAG----L--RAIGYDFDY   82 (298)
Q Consensus         9 ~~~~~~k~viFDlDGTL~d~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~----~--~~~~~~~~~   82 (298)
                      .+|+++|+|+|||||||+++...+..++...     .+..|+......     .....|.....    +  ..++...+.
T Consensus        19 ~~m~~~k~i~fDlDGTL~d~~~~~~~~~~~~-----~~~~g~~~~~~~-----~~~~~g~~~~~~~~~~~~~~~~~~~~~   88 (243)
T 3qxg_A           19 HMRKKLKAVLFDMDGVLFNSMPYHSEAWHQV-----MKTHGLDLSREE-----AYMHEGRTGASTINIVFQRELGKEATQ   88 (243)
T ss_dssp             ---CCCCEEEECSBTTTBCCHHHHHHHHHHH-----HHHTTCCCCHHH-----HHHTTTSCHHHHHHHHHHHHHSSCCCH
T ss_pred             cccccCCEEEEcCCCCCCCCHHHHHHHHHHH-----HHHhCCCCCHHH-----HHHHhCCCHHHHHHHHHHHHhCCCCCH
Confidence            3456789999999999999888777777653     344566543321     12222322111    1  113444444


Q ss_pred             hhHHHHhhcc----cCCCCCCCChhHHHHHHhCC---CcEEEEeCCChHHHHHHHHHhCCCCcc--ceeEeecCCCCCCC
Q 022360           83 DDYHSFVHGR----LPYENLKPDPVLRSLLLSLP---LRKIIFTNADKVHAVKVLSRLGLEDCF--EGIICFETLNPTHK  153 (298)
Q Consensus        83 ~~~~~~~~~~----~~~~~~~~~~g~~~~L~~l~---~~~~ivS~~~~~~~~~~l~~l~l~~~f--~~i~~~~~~~~~~~  153 (298)
                      +.+.......    .......++|++.++|+.++   ++++++|+.....+...++. ++..+|  +.++++++.+.   
T Consensus        89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~-~l~~~f~~d~i~~~~~~~~---  164 (243)
T 3qxg_A           89 EEIESIYHEKSILFNSYPEAERMPGAWELLQKVKSEGLTPMVVTGSGQLSLLERLEH-NFPGMFHKELMVTAFDVKY---  164 (243)
T ss_dssp             HHHHHHHHHHHHHHHTSSCCCBCTTHHHHHHHHHHTTCEEEEECCCCCHHHHTTHHH-HSTTTCCGGGEECTTTCSS---
T ss_pred             HHHHHHHHHHHHHHHhcccCCCCCCHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHH-hHHHhcCcceEEeHHhCCC---
Confidence            4433322110    01234678899999988874   78999999998888888888 999999  88998887664   


Q ss_pred             CCCCCChhhHHHHHhhhcccCCCCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCc
Q 022360          154 NTVSDDEDDIAFVESAASTTTSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSV  233 (298)
Q Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~p~~~i~iGDs~  233 (298)
                                                                         +||+|.+++.+++++|++|++|++|||+.
T Consensus       165 ---------------------------------------------------~kp~~~~~~~~~~~lg~~~~~~i~vGD~~  193 (243)
T 3qxg_A          165 ---------------------------------------------------GKPNPEPYLMALKKGGLKADEAVVIENAP  193 (243)
T ss_dssp             ---------------------------------------------------CTTSSHHHHHHHHHTTCCGGGEEEEECSH
T ss_pred             ---------------------------------------------------CCCChHHHHHHHHHcCCCHHHeEEEeCCH
Confidence                                                               79999999999999999999999999999


Q ss_pred             cchHHHHHcCCeEEEecCCCC------CCCCCEEeCCHHHHHHHhHHhh
Q 022360          234 RNIQAGKRVGLDTVLIGKSQR------VKGADYAFESIHNIKEAIPELW  276 (298)
Q Consensus       234 ~Di~~a~~aG~~~v~v~~~~~------~~~ad~i~~s~~~l~~~l~~~~  276 (298)
                      ||+.||+.+|+.++++.++..      ...|+++++++.+|.+.|+++.
T Consensus       194 ~Di~~a~~aG~~~i~v~~~~~~~~~l~~~~ad~v~~s~~el~~~l~~li  242 (243)
T 3qxg_A          194 LGVEAGHKAGIFTIAVNTGPLDGQVLLDAGADLLFPSMQTLCDSWDTIM  242 (243)
T ss_dssp             HHHHHHHHTTCEEEEECCSSSCHHHHHHTTCSEEESCHHHHHHHHHHHT
T ss_pred             HHHHHHHHCCCEEEEEeCCCCCHHHHHhcCCCEEECCHHHHHHHHHhhh
Confidence            999999999999999987754      2479999999999999998763

>3kzx_A HAD-superfamily hydrolase, subfamily IA, variant; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ehrlich chaffeensis; 1.90A {Ehrlichia chaffeensis}

Probab=99.93  E-value=5.2e-26  Score=197.02  Aligned_cols=200  Identities=20%  Similarity=0.242  Sum_probs=146.4

Q ss_pred             cccCccEEEEeCCCCccCCCccHHHHH-HHHHHHHHHHHhCCChhHHH-----HHHHHHHHHhCCCHHHHHHccCCCChh
Q 022360           10 AAAKYDCLLFDLDDTLYPYSSGIAAAC-GQNIKDYMVEKLGIERSKIE-----DLGNLLYKNYGTTMAGLRAIGYDFDYD   83 (298)
Q Consensus        10 ~~~~~k~viFDlDGTL~d~~~~~~~~~-~~~~~~~~~~~~g~~~~~~~-----~~~~~~~~~~g~~~~~~~~~~~~~~~~   83 (298)
                      .++++|+|+||+||||+++...+..++ .+.+     +..|.......     .....+....+......        ..
T Consensus        21 ~m~~~k~i~fDlDGTL~d~~~~~~~~~~~~~~-----~~~g~~~~~~~~~~g~~~~~~~~~~~~~~~~~~--------~~   87 (231)
T 3kzx_A           21 SMKQPTAVIFDWYNTLIDTSINIDRTTFYQVL-----DQMGYKNIDLDSIPNSTIPKYLITLLGKRWKEA--------TI   87 (231)
T ss_dssp             CCCCCSEEEECTBTTTEETTSSCCHHHHHHHH-----HHTTCCCCCCTTSCTTTHHHHHHHHHGGGHHHH--------HH
T ss_pred             ccCCCCEEEECCCCCCcCCchhHHHHHHHHHH-----HHcCCCHHHHHHHhCccHHHHHHHHhCchHHHH--------HH
Confidence            345689999999999999887777777 6533     33444321100     00001111111111100        12


Q ss_pred             hHHHHhhcccCCCCCCCChhHHHHHHhCC---CcEEEEeCCChHHHHHHHHHhCCCCccceeEeecCCCCCCCCCCCCCh
Q 022360           84 DYHSFVHGRLPYENLKPDPVLRSLLLSLP---LRKIIFTNADKVHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSDDE  160 (298)
Q Consensus        84 ~~~~~~~~~~~~~~~~~~~g~~~~L~~l~---~~~~ivS~~~~~~~~~~l~~l~l~~~f~~i~~~~~~~~~~~~~~~~~~  160 (298)
                      .+...+..........++|++.++|+.++   ++++++|+.....++..++.+++..+|+.++++++.+.          
T Consensus        88 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~----------  157 (231)
T 3kzx_A           88 LYENSLEKSQKSDNFMLNDGAIELLDTLKENNITMAIVSNKNGERLRSEIHHKNLTHYFDSIIGSGDTGT----------  157 (231)
T ss_dssp             HHHHHHHHCCSCCCCEECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCGGGCSEEEEETSSSC----------
T ss_pred             HHHHHHhhhcccccceECcCHHHHHHHHHHCCCeEEEEECCCHHHHHHHHHHCCchhheeeEEcccccCC----------
Confidence            23333331223456788999999988874   78999999999999999999999999999999987765          


Q ss_pred             hhHHHHHhhhcccCCCCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCCCC-cEEEEcCCccchHHH
Q 022360          161 DDIAFVESAASTTTSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQ-RTLFFEDSVRNIQAG  239 (298)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~p~-~~i~iGDs~~Di~~a  239 (298)
                                                                  +||++.+++.+++++|++|+ +|++|||+.||++||
T Consensus       158 --------------------------------------------~Kp~~~~~~~~~~~lgi~~~~~~v~vGD~~~Di~~a  193 (231)
T 3kzx_A          158 --------------------------------------------IKPSPEPVLAALTNINIEPSKEVFFIGDSISDIQSA  193 (231)
T ss_dssp             --------------------------------------------CTTSSHHHHHHHHHHTCCCSTTEEEEESSHHHHHHH
T ss_pred             --------------------------------------------CCCChHHHHHHHHHcCCCcccCEEEEcCCHHHHHHH
Confidence                                                        79999999999999999999 999999999999999


Q ss_pred             HHcCCeEEEecCCCCCCCCCEEeCCHHHHHHHhHHhhc
Q 022360          240 KRVGLDTVLIGKSQRVKGADYAFESIHNIKEAIPELWE  277 (298)
Q Consensus       240 ~~aG~~~v~v~~~~~~~~ad~i~~s~~~l~~~l~~~~~  277 (298)
                      +++|+.+++++.+.. ..+++++.++.+|.++|.++++
T Consensus       194 ~~aG~~~v~~~~~~~-~~~~~~~~~~~el~~~l~~~l~  230 (231)
T 3kzx_A          194 IEAGCLPIKYGSTNI-IKDILSFKNFYDIRNFICQLIN  230 (231)
T ss_dssp             HHTTCEEEEECC------CCEEESSHHHHHHHHHHHHC
T ss_pred             HHCCCeEEEECCCCC-CCCceeeCCHHHHHHHHHHHhc
Confidence            999999999966554 5789999999999999998764

>3mc1_A Predicted phosphatase, HAD family; PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.93A {Clostridium acetobutylicum} SCOP: c.108.1.0

Probab=99.93  E-value=1.4e-25  Score=193.22  Aligned_cols=200  Identities=22%  Similarity=0.295  Sum_probs=148.8

Q ss_pred             CccEEEEeCCCCccCCCccHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHhCCCHHHHHHccCCCChhh-------H
Q 022360           13 KYDCLLFDLDDTLYPYSSGIAAACGQNIKDYMVEKLGIERSKIEDLGNLLYKNYGTTMAGLRAIGYDFDYDD-------Y   85 (298)
Q Consensus        13 ~~k~viFDlDGTL~d~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~-------~   85 (298)
                      ++|+|+||+||||+++...+..++...     .+..|.......    .+....|............++.+.       +
T Consensus         3 m~k~i~fDlDGTL~d~~~~~~~~~~~~-----~~~~g~~~~~~~----~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~   73 (226)
T 3mc1_A            3 LYNYVLFDLDGTLTDSAEGITKSVKYS-----LNKFDIQVEDLS----SLNKFVGPPLKTSFMEYYNFDEETATVAIDYY   73 (226)
T ss_dssp             CCCEEEECSBTTTBCCHHHHHHHHHHH-----HHTTTCCCSCGG----GGGGGSSSCHHHHHHHHHCCCHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCccccCHHHHHHHHHHH-----HHHcCCCCCCHH----HHHHHhCcCHHHHHHHHhCCCHHHHHHHHHHH
Confidence            489999999999999887777777753     334455432110    011122333222211111222222       2


Q ss_pred             HHHhhcccCCCCCCCChhHHHHHHhCC---CcEEEEeCCChHHHHHHHHHhCCCCccceeEeecCCCCCCCCCCCCChhh
Q 022360           86 HSFVHGRLPYENLKPDPVLRSLLLSLP---LRKIIFTNADKVHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSDDEDD  162 (298)
Q Consensus        86 ~~~~~~~~~~~~~~~~~g~~~~L~~l~---~~~~ivS~~~~~~~~~~l~~l~l~~~f~~i~~~~~~~~~~~~~~~~~~~~  162 (298)
                      ...+.. .......++||+.++|+.++   ++++++|++....++..++.+++..+|+.++++++.+.            
T Consensus        74 ~~~~~~-~~~~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~------------  140 (226)
T 3mc1_A           74 RDYFKA-KGMFENKVYDGIEALLSSLKDYGFHLVVATSKPTVFSKQILEHFKLAFYFDAIVGSSLDGK------------  140 (226)
T ss_dssp             HHHHTT-TGGGSCCBCTTHHHHHHHHHHHTCEEEEEEEEEHHHHHHHHHHTTCGGGCSEEEEECTTSS------------
T ss_pred             HHHHHH-hCcccCccCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhCCHhheeeeeccCCCCC------------
Confidence            222222 12245678999999999884   78999999999999999999999999999999987664            


Q ss_pred             HHHHHhhhcccCCCCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHHc
Q 022360          163 IAFVESAASTTTSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRV  242 (298)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a~~a  242 (298)
                                                                +||++.+++.+++++|++|++|++|||+.||++||+.+
T Consensus       141 ------------------------------------------~kp~~~~~~~~~~~lgi~~~~~i~iGD~~~Di~~a~~a  178 (226)
T 3mc1_A          141 ------------------------------------------LSTKEDVIRYAMESLNIKSDDAIMIGDREYDVIGALKN  178 (226)
T ss_dssp             ------------------------------------------SCSHHHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHTT
T ss_pred             ------------------------------------------CCCCHHHHHHHHHHhCcCcccEEEECCCHHHHHHHHHC
Confidence                                                      79999999999999999999999999999999999999


Q ss_pred             CCeEEEecCCCC------CCCCCEEeCCHHHHHHHhHHhh
Q 022360          243 GLDTVLIGKSQR------VKGADYAFESIHNIKEAIPELW  276 (298)
Q Consensus       243 G~~~v~v~~~~~------~~~ad~i~~s~~~l~~~l~~~~  276 (298)
                      |+.++++.++..      +..|+++++|+.+|.++|...-
T Consensus       179 G~~~i~v~~g~~~~~~~~~~~ad~v~~s~~el~~~~~~~~  218 (226)
T 3mc1_A          179 NLPSIGVTYGFGSYEELKNAGANYIVNSVDELHKKILELR  218 (226)
T ss_dssp             TCCEEEESSSSSCHHHHHHHTCSEEESSHHHHHHHHHTC-
T ss_pred             CCCEEEEccCCCCHHHHHHcCCCEEECCHHHHHHHHHHHh
Confidence            999999987653      4789999999999999887653

>2gfh_A Haloacid dehalogenase-like hydrolase domain conta; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.90A {Mus musculus} SCOP: c.108.1.6 PDB: 2w4m_A

Probab=99.93  E-value=6.5e-25  Score=195.84  Aligned_cols=213  Identities=17%  Similarity=0.211  Sum_probs=152.6

Q ss_pred             cccccCccEEEEeCCCCccCCCccHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHhC-------CCHHHH-------
Q 022360            8 RMAAAKYDCLLFDLDDTLYPYSSGIAAACGQNIKDYMVEKLGIERSKIEDLGNLLYKNYG-------TTMAGL-------   73 (298)
Q Consensus         8 ~~~~~~~k~viFDlDGTL~d~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g-------~~~~~~-------   73 (298)
                      .|..+++|+|+|||||||+|+...+..++...+.. +....|+................+       .+...+       
T Consensus        12 ~~~~~~~k~viFDlDGTLvds~~~~~~a~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   90 (260)
T 2gfh_A           12 HMGLSRVRAVFFDLDNTLIDTAGASRRGMLEVIKL-LQSKYHYKEEAEIICDKVQVKLSKECFHPYSTCITDVRTSHWEE   90 (260)
T ss_dssp             CEECCCCCEEEECCBTTTBCHHHHHHHHHHHHHHH-HHHTTCCCTHHHHHHHHHHHHHHTCCCC----CHHHHHHHHHHH
T ss_pred             hcccccceEEEEcCCCCCCCCHHHHHHHHHHHHHH-HHHhcCCcHHHHHHHHHHHHHHHhhccccccccHHHHHHHHHHH
Confidence            46677899999999999999888777777765554 333456654221111111111111       111111       


Q ss_pred             --HHc-cCCCChhh---HHHHhhcccCCCCCCCChhHHHHHHhCC--CcEEEEeCCChHHHHHHHHHhCCCCccceeEee
Q 022360           74 --RAI-GYDFDYDD---YHSFVHGRLPYENLKPDPVLRSLLLSLP--LRKIIFTNADKVHAVKVLSRLGLEDCFEGIICF  145 (298)
Q Consensus        74 --~~~-~~~~~~~~---~~~~~~~~~~~~~~~~~~g~~~~L~~l~--~~~~ivS~~~~~~~~~~l~~l~l~~~f~~i~~~  145 (298)
                        ... +.......   +...+... ......++||+.++|+.|+  ++++|+||++...++..++++|+..+|+.++++
T Consensus        91 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~g~~~~L~~L~~~~~l~i~Tn~~~~~~~~~l~~~gl~~~f~~i~~~  169 (260)
T 2gfh_A           91 AIQETKGGADNRKLAEECYFLWKST-RLQHMILADDVKAMLTELRKEVRLLLLTNGDRQTQREKIEACACQSYFDAIVIG  169 (260)
T ss_dssp             HHHHHHCSSCCHHHHHHHHHHHHHH-HHHTCCCCHHHHHHHHHHHTTSEEEEEECSCHHHHHHHHHHHTCGGGCSEEEEG
T ss_pred             HHHHhcCccchHHHHHHHHHHHHHH-HHhcCCCCcCHHHHHHHHHcCCcEEEEECcChHHHHHHHHhcCHHhhhheEEec
Confidence              000 11111111   11111110 1134688999999999885  789999999999999999999999999999999


Q ss_pred             cCCCCCCCCCCCCChhhHHHHHhhhcccCCCCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCCCCc
Q 022360          146 ETLNPTHKNTVSDDEDDIAFVESAASTTTSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQR  225 (298)
Q Consensus       146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~p~~  225 (298)
                      ++.+.                                                      +||+|++|..+++++|++|++
T Consensus       170 ~~~~~------------------------------------------------------~KP~p~~~~~~~~~~~~~~~~  195 (260)
T 2gfh_A          170 GEQKE------------------------------------------------------EKPAPSIFYHCCDLLGVQPGD  195 (260)
T ss_dssp             GGSSS------------------------------------------------------CTTCHHHHHHHHHHHTCCGGG
T ss_pred             CCCCC------------------------------------------------------CCCCHHHHHHHHHHcCCChhh
Confidence            87765                                                      799999999999999999999


Q ss_pred             EEEEcCC-ccchHHHHHcCC-eEEEecCCC-----CCCCCCEEeCCHHHHHHHhHHhh
Q 022360          226 TLFFEDS-VRNIQAGKRVGL-DTVLIGKSQ-----RVKGADYAFESIHNIKEAIPELW  276 (298)
Q Consensus       226 ~i~iGDs-~~Di~~a~~aG~-~~v~v~~~~-----~~~~ad~i~~s~~~l~~~l~~~~  276 (298)
                      |++|||+ .+|+++|+++|+ .++++.++.     ....+++++.++.+|.++|..+.
T Consensus       196 ~~~vGDs~~~Di~~A~~aG~~~~i~v~~~~~~~~~~~~~~~~~i~~~~el~~~l~~~~  253 (260)
T 2gfh_A          196 CVMVGDTLETDIQGGLNAGLKATVWINKSGRVPLTSSPMPHYMVSSVLELPALLQSID  253 (260)
T ss_dssp             EEEEESCTTTHHHHHHHTTCSEEEEECTTCCCCSSCCCCCSEEESSGGGHHHHHHHHT
T ss_pred             EEEECCCchhhHHHHHHCCCceEEEEcCCCCCcCcccCCCCEEECCHHHHHHHHHHHh
Confidence            9999996 899999999999 799886643     24578999999999999887765

>3e58_A Putative beta-phosphoglucomutase; structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.86A {Streptococcus thermophilus lmg 18311}

Probab=99.93  E-value=4.6e-26  Score=193.20  Aligned_cols=197  Identities=18%  Similarity=0.207  Sum_probs=145.0

Q ss_pred             cCccEEEEeCCCCccCCCccHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHhCCCHH----HH-HHccCCCChhhHH
Q 022360           12 AKYDCLLFDLDDTLYPYSSGIAAACGQNIKDYMVEKLGIERSKIEDLGNLLYKNYGTTMA----GL-RAIGYDFDYDDYH   86 (298)
Q Consensus        12 ~~~k~viFDlDGTL~d~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~----~~-~~~~~~~~~~~~~   86 (298)
                      +++|+|+||+||||+++...+..++...     .+..|.......     +....|....    .+ ...+.......+.
T Consensus         3 ~m~k~i~fDlDGTL~~~~~~~~~~~~~~-----~~~~g~~~~~~~-----~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~   72 (214)
T 3e58_A            3 AMVEAIIFDMDGVLFDTEKYYYDRRASF-----LGQKGISIDHLP-----PSFFIGGNTKQVWENILRDEYDKWDVSTLQ   72 (214)
T ss_dssp             -CCCEEEEESBTTTBCCHHHHHHHHHHH-----HHHTTCCCTTSC-----HHHHTTSCGGGCHHHHHGGGGGGSCHHHHH
T ss_pred             ccccEEEEcCCCCccccHHHHHHHHHHH-----HHHcCCCCCHHH-----HHHHcCCCHHHHHHHHHHhhcCCCCHHHHH
Confidence            4589999999999999887777776653     333455432211     1112232211    11 1222223333332


Q ss_pred             H----HhhcccCCCCCCCChhHHHHHHhCC---CcEEEEeCCChHHHHHHHHHhCCCCccceeEeecCCCCCCCCCCCCC
Q 022360           87 S----FVHGRLPYENLKPDPVLRSLLLSLP---LRKIIFTNADKVHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSDD  159 (298)
Q Consensus        87 ~----~~~~~~~~~~~~~~~g~~~~L~~l~---~~~~ivS~~~~~~~~~~l~~l~l~~~f~~i~~~~~~~~~~~~~~~~~  159 (298)
                      .    ...+........++|++.++|+.++   .+++++|++....++..++++++..+|+.++++++.+.         
T Consensus        73 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~---------  143 (214)
T 3e58_A           73 EEYNTYKQNNPLPYKELIFPDVLKVLNEVKSQGLEIGLASSSVKADIFRALEENRLQGFFDIVLSGEEFKE---------  143 (214)
T ss_dssp             HHHHHHHHHSCCCHHHHBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCSEEEEGGGCSS---------
T ss_pred             HHHHHHHHHhhcccCCCcCchHHHHHHHHHHCCCCEEEEeCCcHHHHHHHHHHcCcHhheeeEeecccccC---------
Confidence            2    2222222123467899999988874   78999999999999999999999999999999987765         


Q ss_pred             hhhHHHHHhhhcccCCCCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccchHHH
Q 022360          160 EDDIAFVESAASTTTSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAG  239 (298)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a  239 (298)
                                                                   +||++.+++.+++++|++|++|++|||+.||+.||
T Consensus       144 ---------------------------------------------~kp~~~~~~~~~~~~~~~~~~~~~iGD~~~Di~~a  178 (214)
T 3e58_A          144 ---------------------------------------------SKPNPEIYLTALKQLNVQASRALIIEDSEKGIAAG  178 (214)
T ss_dssp             ---------------------------------------------CTTSSHHHHHHHHHHTCCGGGEEEEECSHHHHHHH
T ss_pred             ---------------------------------------------CCCChHHHHHHHHHcCCChHHeEEEeccHhhHHHH
Confidence                                                         79999999999999999999999999999999999


Q ss_pred             HHcCCeEEEecCCC---CCCCCCEEeCCHHHHHHHh
Q 022360          240 KRVGLDTVLIGKSQ---RVKGADYAFESIHNIKEAI  272 (298)
Q Consensus       240 ~~aG~~~v~v~~~~---~~~~ad~i~~s~~~l~~~l  272 (298)
                      +++|+.++++.++.   ....++++++++.+|.++|
T Consensus       179 ~~aG~~~~~~~~~~~~~~~~~a~~~~~~~~el~~~i  214 (214)
T 3e58_A          179 VAADVEVWAIRDNEFGMDQSAAKGLLDSLTDVLDLI  214 (214)
T ss_dssp             HHTTCEEEEECCSSSCCCCTTSSEEESSGGGGGGGC
T ss_pred             HHCCCEEEEECCCCccchhccHHHHHHHHHHHHhhC
Confidence            99999999997643   3578999999999987653

>3smv_A S-(-)-azetidine-2-carboxylate hydrolase; haloacid dehalogenase superfamily, L-azetidine-2- carboxylate; HET: GOL; 1.38A {Pseudomonas}

Probab=99.93  E-value=7.8e-25  Score=189.08  Aligned_cols=203  Identities=21%  Similarity=0.251  Sum_probs=147.9

Q ss_pred             ccccCccEEEEeCCCCccCCCccHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHH---h-----CCCH--------H-
Q 022360            9 MAAAKYDCLLFDLDDTLYPYSSGIAAACGQNIKDYMVEKLGIERSKIEDLGNLLYKN---Y-----GTTM--------A-   71 (298)
Q Consensus         9 ~~~~~~k~viFDlDGTL~d~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~---~-----g~~~--------~-   71 (298)
                      |.++++|+|+||+||||+++...+..++...+     +..|+....... ...+...   .     +...        . 
T Consensus         1 M~~~~~k~i~fD~DGTL~d~~~~~~~~~~~~~-----~~~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   74 (240)
T 3smv_A            1 MQLTDFKALTFDCYGTLIDWETGIVNALQPLA-----KRTGKTFTSDEL-LEVFGRNESPQQTETPGALYQDILRAVYDR   74 (240)
T ss_dssp             CCGGGCSEEEECCBTTTBCHHHHHHHHTHHHH-----HHHTCCCCHHHH-HHHHHHHHGGGCCSSCCSCHHHHHHHHHHH
T ss_pred             CCCccceEEEEeCCCcCcCCchhHHHHHHHHH-----HHhCCCCCHHHH-HHHHHHHHHHHHhhCCCCChhHHHHHHHHH
Confidence            45567999999999999997777776666533     335665433221 1111110   0     0111        1 


Q ss_pred             HHHHccCCCChhhHHHHhhcccCCCCCCCChhHHHHHHhCC--CcEEEEeCCChHHHHHHHHHhCCCCccceeEeecCCC
Q 022360           72 GLRAIGYDFDYDDYHSFVHGRLPYENLKPDPVLRSLLLSLP--LRKIIFTNADKVHAVKVLSRLGLEDCFEGIICFETLN  149 (298)
Q Consensus        72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~L~~l~--~~~~ivS~~~~~~~~~~l~~l~l~~~f~~i~~~~~~~  149 (298)
                      .....+..........+ ...  .....++|++.++|+.++  .+++++||+....+...++.  +..+|+.++++++++
T Consensus        75 ~~~~~~~~~~~~~~~~~-~~~--~~~~~~~~~~~~~l~~l~~~~~~~i~tn~~~~~~~~~l~~--l~~~fd~i~~~~~~~  149 (240)
T 3smv_A           75 IAKEWGLEPDAAEREEF-GTS--VKNWPAFPDTVEALQYLKKHYKLVILSNIDRNEFKLSNAK--LGVEFDHIITAQDVG  149 (240)
T ss_dssp             HHHHTTCCCCHHHHHHH-HTG--GGGCCBCTTHHHHHHHHHHHSEEEEEESSCHHHHHHHHTT--TCSCCSEEEEHHHHT
T ss_pred             HHHHhCCCCCHHHHHHH-HHH--HhcCCCCCcHHHHHHHHHhCCeEEEEeCCChhHHHHHHHh--cCCccCEEEEccccC
Confidence            11233444333333222 221  245688999999998885  78999999999988888886  557899999998776


Q ss_pred             CCCCCCCCCChhhHHHHHhhhcccCCCCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHH---HHHcCCCCCcE
Q 022360          150 PTHKNTVSDDEDDIAFVESAASTTTSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKA---LKIASINPQRT  226 (298)
Q Consensus       150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~---l~~l~i~p~~~  226 (298)
                      .                                                      .||+|..|..+   ++++|++|++|
T Consensus       150 ~------------------------------------------------------~KP~~~~~~~~l~~~~~lgi~~~~~  175 (240)
T 3smv_A          150 S------------------------------------------------------YKPNPNNFTYMIDALAKAGIEKKDI  175 (240)
T ss_dssp             S------------------------------------------------------CTTSHHHHHHHHHHHHHTTCCGGGE
T ss_pred             C------------------------------------------------------CCCCHHHHHHHHHHHHhcCCCchhE
Confidence            5                                                      79999999999   89999999999


Q ss_pred             EEEcCCc-cchHHHHHcCCeEEEecCC-----------C-CCCCCCEEeCCHHHHHHHhHHhh
Q 022360          227 LFFEDSV-RNIQAGKRVGLDTVLIGKS-----------Q-RVKGADYAFESIHNIKEAIPELW  276 (298)
Q Consensus       227 i~iGDs~-~Di~~a~~aG~~~v~v~~~-----------~-~~~~ad~i~~s~~~l~~~l~~~~  276 (298)
                      ++|||+. ||+++|+.+|+.+++++.+           . ....|+++++|+.+|.++|.+++
T Consensus       176 ~~vGD~~~~Di~~a~~aG~~~~~~~~~~~~~g~g~~~~~~~~~~ad~v~~~~~el~~~l~~~l  238 (240)
T 3smv_A          176 LHTAESLYHDHIPANDAGLVSAWIYRRHGKEGYGATHVPSRMPNVDFRFNSMGEMAEAHKQAL  238 (240)
T ss_dssp             EEEESCTTTTHHHHHHHTCEEEEECTTCC-------CCCSSCCCCSEEESSHHHHHHHHHHHH
T ss_pred             EEECCCchhhhHHHHHcCCeEEEEcCCCcccCCCCCCCCcCCCCCCEEeCCHHHHHHHHHHHh
Confidence            9999996 9999999999999998754           1 24789999999999999998875

>4eek_A Beta-phosphoglucomutase-related protein; hydrolase, magnesium binding site, enzyme function initiativ; 1.60A {Deinococcus radiodurans} PDB: 4eel_A* 4een_A

Probab=99.93  E-value=4.2e-26  Score=201.40  Aligned_cols=203  Identities=21%  Similarity=0.156  Sum_probs=151.0

Q ss_pred             cccccCccEEEEeCCCCccCCCccHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHhCCCHHHH-----HHccCCCCh
Q 022360            8 RMAAAKYDCLLFDLDDTLYPYSSGIAAACGQNIKDYMVEKLGIERSKIEDLGNLLYKNYGTTMAGL-----RAIGYDFDY   82 (298)
Q Consensus         8 ~~~~~~~k~viFDlDGTL~d~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~-----~~~~~~~~~   82 (298)
                      .|.++++|+|+||+||||+++...+..++...     .+..|+.......    .....|......     ...+...+.
T Consensus        22 sM~~~~ik~i~fDlDGTL~d~~~~~~~~~~~~-----~~~~g~~~~~~~~----~~~~~g~~~~~~~~~~~~~~~~~~~~   92 (259)
T 4eek_A           22 SMPDAPFDAVLFDLDGVLVESEGIIAQVWQSV-----LAERGLHLDLTEI----AMYFTGQRFDGVLAYLAQQHDFVPPP   92 (259)
T ss_dssp             ---CCCCSEEEEESBTTTEECHHHHHHHHHHH-----HHHTTCCCCHHHH----HHHTTTCCHHHHHHHHHHHHCCCCCT
T ss_pred             HHHhcCCCEEEECCCCCcccCHHHHHHHHHHH-----HHHhCCCCCHHHH----HHHHhCCCHHHHHHHHHHHcCCCCCH
Confidence            35567899999999999999877777766653     3445665432211    112223332222     122333332


Q ss_pred             hh---HHHHhhcccCCCCCCCChhHHHHHHhC---CCcEEEEeCCChHHHHHHHHHhCCCCccce-eEeecCCC-CCCCC
Q 022360           83 DD---YHSFVHGRLPYENLKPDPVLRSLLLSL---PLRKIIFTNADKVHAVKVLSRLGLEDCFEG-IICFETLN-PTHKN  154 (298)
Q Consensus        83 ~~---~~~~~~~~~~~~~~~~~~g~~~~L~~l---~~~~~ivS~~~~~~~~~~l~~l~l~~~f~~-i~~~~~~~-~~~~~  154 (298)
                      ..   +...+.+..  ....++|++.++|+.+   +++++++|+.....++..++.+++..+|+. ++++++.+ .    
T Consensus        93 ~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~i~~~~~~~~~----  166 (259)
T 4eek_A           93 DFLDVLETRFNAAM--TGVTAIEGAAETLRALRAAGVPFAIGSNSERGRLHLKLRVAGLTELAGEHIYDPSWVGGR----  166 (259)
T ss_dssp             THHHHHHHHHHHHH--TTCEECTTHHHHHHHHHHHTCCEEEECSSCHHHHHHHHHHTTCHHHHCSCEECGGGGTTC----
T ss_pred             HHHHHHHHHHHHHh--ccCCcCccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHhcChHhhccceEEeHhhcCcC----
Confidence            22   222222211  4567889999999887   478999999999999999999999999999 88887765 4    


Q ss_pred             CCCCChhhHHHHHhhhcccCCCCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCcc
Q 022360          155 TVSDDEDDIAFVESAASTTTSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVR  234 (298)
Q Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~  234 (298)
                                                                        +||++.+++.+++++|++|++|++|||+.|
T Consensus       167 --------------------------------------------------~Kp~~~~~~~~~~~lgi~~~~~i~iGD~~~  196 (259)
T 4eek_A          167 --------------------------------------------------GKPHPDLYTFAAQQLGILPERCVVIEDSVT  196 (259)
T ss_dssp             --------------------------------------------------CTTSSHHHHHHHHHTTCCGGGEEEEESSHH
T ss_pred             --------------------------------------------------CCCChHHHHHHHHHcCCCHHHEEEEcCCHH
Confidence                                                              799999999999999999999999999999


Q ss_pred             chHHHHHcCCeEEEecCCCC----------CCCCCEEeCCHHHHHHHhHHh
Q 022360          235 NIQAGKRVGLDTVLIGKSQR----------VKGADYAFESIHNIKEAIPEL  275 (298)
Q Consensus       235 Di~~a~~aG~~~v~v~~~~~----------~~~ad~i~~s~~~l~~~l~~~  275 (298)
                      |++||+++|+.++++.++..          ...|++++.++.+|.++|.+.
T Consensus       197 Di~~a~~aG~~~i~v~~g~~~~~~~~~~~~~~~ad~vi~~l~el~~~l~~~  247 (259)
T 4eek_A          197 GGAAGLAAGATLWGLLVPGHPHPDGAAALSRLGAARVLTSHAELRAALAEA  247 (259)
T ss_dssp             HHHHHHHHTCEEEEECCTTSCCSSCHHHHHHHTCSEEECSHHHHHHHHHHT
T ss_pred             HHHHHHHCCCEEEEEccCCCcccccHHHHHhcCcchhhCCHHHHHHHHHhc
Confidence            99999999999999976632          356999999999999999874

>3um9_A Haloacid dehalogenase, type II; haloacid dehalogenase-like hydrolase protein superfamily, defluorinase, hydrolase; 2.19A {Polaromonas SP}

Probab=99.93  E-value=3.8e-25  Score=190.69  Aligned_cols=144  Identities=19%  Similarity=0.296  Sum_probs=120.2

Q ss_pred             HccCCCChhhHHHHhhcccCCCCCCCChhHHHHHHhCC---CcEEEEeCCChHHHHHHHHHhCCCCccceeEeecCCCCC
Q 022360           75 AIGYDFDYDDYHSFVHGRLPYENLKPDPVLRSLLLSLP---LRKIIFTNADKVHAVKVLSRLGLEDCFEGIICFETLNPT  151 (298)
Q Consensus        75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~L~~l~---~~~~ivS~~~~~~~~~~l~~l~l~~~f~~i~~~~~~~~~  151 (298)
                      ..+...+.+........   +....++|++.++|+.++   .+++++|+.....++..++.+++..+|+.++++++.+. 
T Consensus        75 ~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~-  150 (230)
T 3um9_A           75 SLGLALDADGEAHLCSE---YLSLTPFADVPQALQQLRAAGLKTAILSNGSRHSIRQVVGNSGLTNSFDHLISVDEVRL-  150 (230)
T ss_dssp             HHTCCCCHHHHHHHHHH---TTSCCBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHTCGGGCSEEEEGGGTTC-
T ss_pred             HcCCCCCHHHHHHHHHH---HhcCCCCCCHHHHHHHHHhCCCeEEEEeCCCHHHHHHHHHHCCChhhcceeEehhhccc-
Confidence            33444444443333332   255788999999988874   78999999999999999999999999999999987764 


Q ss_pred             CCCCCCCChhhHHHHHhhhcccCCCCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcC
Q 022360          152 HKNTVSDDEDDIAFVESAASTTTSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFED  231 (298)
Q Consensus       152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~p~~~i~iGD  231 (298)
                                                                           +||++.++..+++++|++|++|++|||
T Consensus       151 -----------------------------------------------------~kp~~~~~~~~~~~~~~~~~~~~~iGD  177 (230)
T 3um9_A          151 -----------------------------------------------------FKPHQKVYELAMDTLHLGESEILFVSC  177 (230)
T ss_dssp             -----------------------------------------------------CTTCHHHHHHHHHHHTCCGGGEEEEES
T ss_pred             -----------------------------------------------------CCCChHHHHHHHHHhCCCcccEEEEeC
Confidence                                                                 799999999999999999999999999


Q ss_pred             CccchHHHHHcCCeEEEecCCCC-----CCCCCEEeCCHHHHHHHhHHh
Q 022360          232 SVRNIQAGKRVGLDTVLIGKSQR-----VKGADYAFESIHNIKEAIPEL  275 (298)
Q Consensus       232 s~~Di~~a~~aG~~~v~v~~~~~-----~~~ad~i~~s~~~l~~~l~~~  275 (298)
                      +.||+.||+.+|+.++++.++..     +..|+++++++.+|.++|.++
T Consensus       178 ~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~~l~~~  226 (230)
T 3um9_A          178 NSWDATGAKYFGYPVCWINRSNGVFDQLGVVPDIVVSDVGVLASRFSPV  226 (230)
T ss_dssp             CHHHHHHHHHHTCCEEEECTTSCCCCCSSCCCSEEESSHHHHHHTCCC-
T ss_pred             CHHHHHHHHHCCCEEEEEeCCCCccccccCCCcEEeCCHHHHHHHHHHh
Confidence            99999999999999999976542     468999999999999888765

>3qnm_A Haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 1.70A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0

Probab=99.93  E-value=2.1e-24  Score=186.67  Aligned_cols=202  Identities=22%  Similarity=0.289  Sum_probs=146.0

Q ss_pred             cCccEEEEeCCCCccCCCccHHHHHHHHHHHHHHHHhCCCh---hHHHHHH------HHHHHHh--C-CCHH--------
Q 022360           12 AKYDCLLFDLDDTLYPYSSGIAAACGQNIKDYMVEKLGIER---SKIEDLG------NLLYKNY--G-TTMA--------   71 (298)
Q Consensus        12 ~~~k~viFDlDGTL~d~~~~~~~~~~~~~~~~~~~~~g~~~---~~~~~~~------~~~~~~~--g-~~~~--------   71 (298)
                      |++|+|+||+||||+++...+..++...     .+..|+..   .......      ...+..+  + ....        
T Consensus         3 m~~k~i~fDlDGTL~d~~~~~~~~~~~~-----~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   77 (240)
T 3qnm_A            3 LKYKNLFFDLDDTIWAFSRNARDTFEEV-----YQKYSFDRYFDSFDHYYTLYQRRNTELWLEYGEGKVTKEELNRQRFF   77 (240)
T ss_dssp             CCCSEEEECCBTTTBCHHHHHHHHHHHH-----HHHTTGGGTSSSHHHHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHH
T ss_pred             CCceEEEEcCCCCCcCchhhHHHHHHHH-----HHHcCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHH
Confidence            4689999999999999777666666653     34456543   2211110      1111111  1 1111        


Q ss_pred             -HHHHccCCCChhh---HHHHhhcccCCCCCCCChhHHHHHHhCC--CcEEEEeCCChHHHHHHHHHhCCCCccceeEee
Q 022360           72 -GLRAIGYDFDYDD---YHSFVHGRLPYENLKPDPVLRSLLLSLP--LRKIIFTNADKVHAVKVLSRLGLEDCFEGIICF  145 (298)
Q Consensus        72 -~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~g~~~~L~~l~--~~~~ivS~~~~~~~~~~l~~l~l~~~f~~i~~~  145 (298)
                       .+...+.. ....   +...+... ......++|++.++|+.++  ++++++|++....++..++.+++..+|+.++++
T Consensus        78 ~~~~~~~~~-~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~l~~g~~~~i~sn~~~~~~~~~l~~~~l~~~f~~~~~~  155 (240)
T 3qnm_A           78 YPLQAVGVE-DEALAERFSEDFFAI-IPTKSGLMPHAKEVLEYLAPQYNLYILSNGFRELQSRKMRSAGVDRYFKKIILS  155 (240)
T ss_dssp             HHHHHTTCC-CHHHHHHHHHHHHHH-GGGCCCBSTTHHHHHHHHTTTSEEEEEECSCHHHHHHHHHHHTCGGGCSEEEEG
T ss_pred             HHHHHcCCC-cHHHHHHHHHHHHHH-hhhcCCcCccHHHHHHHHHcCCeEEEEeCCchHHHHHHHHHcChHhhceeEEEe
Confidence             11222332 1111   11111111 1234678999999998875  678999999999999999999999999999999


Q ss_pred             cCCCCCCCCCCCCChhhHHHHHhhhcccCCCCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCCCCc
Q 022360          146 ETLNPTHKNTVSDDEDDIAFVESAASTTTSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQR  225 (298)
Q Consensus       146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~p~~  225 (298)
                      ++.+.                                                      +||++.+++.+++++|++|++
T Consensus       156 ~~~~~------------------------------------------------------~kp~~~~~~~~~~~lgi~~~~  181 (240)
T 3qnm_A          156 EDLGV------------------------------------------------------LKPRPEIFHFALSATQSELRE  181 (240)
T ss_dssp             GGTTC------------------------------------------------------CTTSHHHHHHHHHHTTCCGGG
T ss_pred             ccCCC------------------------------------------------------CCCCHHHHHHHHHHcCCCccc
Confidence            87765                                                      799999999999999999999


Q ss_pred             EEEEcCCc-cchHHHHHcCCeEEEecCCC---CCCCCCEEeCCHHHHHHHhHH
Q 022360          226 TLFFEDSV-RNIQAGKRVGLDTVLIGKSQ---RVKGADYAFESIHNIKEAIPE  274 (298)
Q Consensus       226 ~i~iGDs~-~Di~~a~~aG~~~v~v~~~~---~~~~ad~i~~s~~~l~~~l~~  274 (298)
                      |++|||+. ||++||+++|+.+++++++.   ....|+++++|+.|+..+.+.
T Consensus       182 ~~~iGD~~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~d~vi~sl~e~~~~~~~  234 (240)
T 3qnm_A          182 SLMIGDSWEADITGAHGVGMHQAFYNVTERTVFPFQPTYHIHSLKELMNLLEG  234 (240)
T ss_dssp             EEEEESCTTTTHHHHHHTTCEEEEECCSCCCCCSSCCSEEESSTHHHHHHTC-
T ss_pred             EEEECCCchHhHHHHHHcCCeEEEEcCCCCCCcCCCCceEECCHHHHHHHHhc
Confidence            99999996 99999999999999997765   367899999999999987754

>4g9b_A Beta-PGM, beta-phosphoglucomutase; HAD, putative phosphoglucomutase, enzyme function initiative structural genomics, isomerase; 1.70A {Escherichia coli}

Probab=99.93  E-value=4e-26  Score=201.42  Aligned_cols=190  Identities=21%  Similarity=0.199  Sum_probs=129.8

Q ss_pred             ccCccEEEEeCCCCccCCCccHHHHHHHHHHHHHHHHhCCChhHH----------HHHHHHHHHHhCCCH----HHHHHc
Q 022360           11 AAKYDCLLFDLDDTLYPYSSGIAAACGQNIKDYMVEKLGIERSKI----------EDLGNLLYKNYGTTM----AGLRAI   76 (298)
Q Consensus        11 ~~~~k~viFDlDGTL~d~~~~~~~~~~~~~~~~~~~~~g~~~~~~----------~~~~~~~~~~~g~~~----~~~~~~   76 (298)
                      +|++|+|+||+||||+|+...+..++.+     +.+++|++....          ......+....+...    ......
T Consensus         2 ~MkiKaViFDlDGTL~Ds~~~~~~a~~~-----~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~   76 (243)
T 4g9b_A            2 VMKLQGVIFDLDGVITDTAHLHFQAWQQ-----IAAEIGISIDAQFNESLKGISRDESLRRILQHGGKEGDFNSQERAQL   76 (243)
T ss_dssp             CCCCCEEEECSBTTTBCCHHHHHHHHHH-----HHHHTTCCCCTTGGGGGTTCCHHHHHHHHHHHTTCGGGCCHHHHHHH
T ss_pred             CccCcEEEEcCCCcccCCHHHHHHHHHH-----HHHHcCCCCCHHHHHHHcCCCHHHHHHHHHHHhhcccchhHHHHHHH
Confidence            5679999999999999987777777765     344456543221          111112222222110    000000


Q ss_pred             cCCCChhhHHHHhhcccCCCCCCCChhHHHHHHhC---CCcEEEEeCCChHHHHHHHHHhCCCCccceeEeecCCCCCCC
Q 022360           77 GYDFDYDDYHSFVHGRLPYENLKPDPVLRSLLLSL---PLRKIIFTNADKVHAVKVLSRLGLEDCFEGIICFETLNPTHK  153 (298)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~L~~l---~~~~~ivS~~~~~~~~~~l~~l~l~~~f~~i~~~~~~~~~~~  153 (298)
                      ... ....+......   .....++||+.++|+.|   +++++++|++..  ....++++|+..+|+.++++++++.   
T Consensus        77 ~~~-~~~~~~~~~~~---~~~~~~~pg~~~ll~~L~~~g~~i~i~t~~~~--~~~~l~~~gl~~~fd~i~~~~~~~~---  147 (243)
T 4g9b_A           77 AYR-KNLLYVHSLRE---LTVNAVLPGIRSLLADLRAQQISVGLASVSLN--APTILAALELREFFTFCADASQLKN---  147 (243)
T ss_dssp             HHH-HHHHHHHHHHT---CCGGGBCTTHHHHHHHHHHTTCEEEECCCCTT--HHHHHHHTTCGGGCSEECCGGGCSS---
T ss_pred             HHH-HHHHHHHHHHh---cccccccccHHHHHHhhhcccccceecccccc--hhhhhhhhhhccccccccccccccC---
Confidence            000 00011111111   12345689999998877   477888888654  4678999999999999999998875   


Q ss_pred             CCCCCChhhHHHHHhhhcccCCCCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCc
Q 022360          154 NTVSDDEDDIAFVESAASTTTSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSV  233 (298)
Q Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~p~~~i~iGDs~  233 (298)
                                                                         +||+|++|..+++++|++|++|++|||+.
T Consensus       148 ---------------------------------------------------~KP~p~~~~~a~~~lg~~p~e~l~VgDs~  176 (243)
T 4g9b_A          148 ---------------------------------------------------SKPDPEIFLAACAGLGVPPQACIGIEDAQ  176 (243)
T ss_dssp             ---------------------------------------------------CTTSTHHHHHHHHHHTSCGGGEEEEESSH
T ss_pred             ---------------------------------------------------CCCcHHHHHHHHHHcCCChHHEEEEcCCH
Confidence                                                               79999999999999999999999999999


Q ss_pred             cchHHHHHcCCeEEEecCCCCCCCCCEEeCCHHH
Q 022360          234 RNIQAGKRVGLDTVLIGKSQRVKGADYAFESIHN  267 (298)
Q Consensus       234 ~Di~~a~~aG~~~v~v~~~~~~~~ad~i~~s~~~  267 (298)
                      +||++|+++|+.+|++.++..  .++.++++..+
T Consensus       177 ~di~aA~~aG~~~I~V~~g~~--~ad~~~~~~~~  208 (243)
T 4g9b_A          177 AGIDAINASGMRSVGIGAGLT--GAQLLLPSTES  208 (243)
T ss_dssp             HHHHHHHHHTCEEEEESTTCC--SCSEEESSGGG
T ss_pred             HHHHHHHHcCCEEEEECCCCC--cHHHhcCChhh
Confidence            999999999999999988753  44555555433

>2hi0_A Putative phosphoglycolate phosphatase; YP_619066.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.51A {Lactobacillus delbrueckii}

Probab=99.93  E-value=6.4e-25  Score=192.50  Aligned_cols=196  Identities=17%  Similarity=0.258  Sum_probs=142.9

Q ss_pred             CccEEEEeCCCCccCCCccHHHHHHHHHHHHHHHHhCCC-hhHHHHHHHHHHHHhCCCHHHHH-Hc--------------
Q 022360           13 KYDCLLFDLDDTLYPYSSGIAAACGQNIKDYMVEKLGIE-RSKIEDLGNLLYKNYGTTMAGLR-AI--------------   76 (298)
Q Consensus        13 ~~k~viFDlDGTL~d~~~~~~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~~g~~~~~~~-~~--------------   76 (298)
                      ++|+|+|||||||+|+...+..++...     .+..|++ ......    +....|....... ..              
T Consensus         3 ~~k~viFDlDGTL~ds~~~~~~~~~~~-----~~~~g~~~~~~~~~----~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~   73 (240)
T 2hi0_A            3 KYKAAIFDMDGTILDTSADLTSALNYA-----FEQTGHRHDFTVED----IKNFFGSGVVVAVTRALAYEAGSSRESLVA   73 (240)
T ss_dssp             SCSEEEECSBTTTEECHHHHHHHHHHH-----HHHTTSCCCCCHHH----HHHHCSSCHHHHHHHHHHHHTTCCHHHHTT
T ss_pred             cccEEEEecCCCCccCHHHHHHHHHHH-----HHHcCCCCCCCHHH----HHHhcCccHHHHHHHHHHhccccccccccc
Confidence            479999999999999888887777754     3445664 211111    1122233221110 00              


Q ss_pred             --------cCCCChhh-------HHHHhhcccCCCCCCCChhHHHHHHhCC---CcEEEEeCCChHHHHHHHHHhCCCCc
Q 022360           77 --------GYDFDYDD-------YHSFVHGRLPYENLKPDPVLRSLLLSLP---LRKIIFTNADKVHAVKVLSRLGLEDC  138 (298)
Q Consensus        77 --------~~~~~~~~-------~~~~~~~~~~~~~~~~~~g~~~~L~~l~---~~~~ivS~~~~~~~~~~l~~l~l~~~  138 (298)
                              +...+.+.       +...+... ......++||+.++|+.|+   ++++|+||+....++..++++++. +
T Consensus        74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~g~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~-~  151 (240)
T 2hi0_A           74 FGTKDEQIPEAVTQTEVNRVLEVFKPYYADH-CQIKTGPFPGILDLMKNLRQKGVKLAVVSNKPNEAVQVLVEELFPG-S  151 (240)
T ss_dssp             TTSTTCCCCTTCCHHHHHHHHHHHHHHHHHT-SSSSCEECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHSTT-T
T ss_pred             ccccccccCCCCCHHHHHHHHHHHHHHHHHh-hhhcCCcCCCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCc-c
Confidence                    11122222       22222211 1245678899999998774   789999999999899999999998 9


Q ss_pred             cceeEeecCCCCCCCCCCCCChhhHHHHHhhhcccCCCCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHH
Q 022360          139 FEGIICFETLNPTHKNTVSDDEDDIAFVESAASTTTSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKI  218 (298)
Q Consensus       139 f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~  218 (298)
                      |+.++++++.+.                                                      +||+|.++..++++
T Consensus       152 f~~~~~~~~~~~------------------------------------------------------~Kp~p~~~~~~~~~  177 (240)
T 2hi0_A          152 FDFALGEKSGIR------------------------------------------------------RKPAPDMTSECVKV  177 (240)
T ss_dssp             CSEEEEECTTSC------------------------------------------------------CTTSSHHHHHHHHH
T ss_pred             eeEEEecCCCCC------------------------------------------------------CCCCHHHHHHHHHH
Confidence            999999887654                                                      79999999999999


Q ss_pred             cCCCCCcEEEEcCCccchHHHHHcCCeEEEecCCCC------CCCCCEEeCCHHHHHHHhH
Q 022360          219 ASINPQRTLFFEDSVRNIQAGKRVGLDTVLIGKSQR------VKGADYAFESIHNIKEAIP  273 (298)
Q Consensus       219 l~i~p~~~i~iGDs~~Di~~a~~aG~~~v~v~~~~~------~~~ad~i~~s~~~l~~~l~  273 (298)
                      +|++|++|++|||+.||+++|+++|+.++++.++..      ...+++++.++.+|.+.|.
T Consensus       178 l~~~~~~~~~vGDs~~Di~~a~~aG~~~v~v~~~~~~~~~~~~~~a~~~~~~~~el~~~l~  238 (240)
T 2hi0_A          178 LGVPRDKCVYIGDSEIDIQTARNSEMDEIAVNWGFRSVPFLQKHGATVIVDTAEKLEEAIL  238 (240)
T ss_dssp             HTCCGGGEEEEESSHHHHHHHHHTTCEEEEESSSSSCHHHHHHTTCCCEECSHHHHHHHHH
T ss_pred             cCCCHHHeEEEcCCHHHHHHHHHCCCeEEEECCCCCchhHHHhcCCCEEECCHHHHHHHhc
Confidence            999999999999999999999999999999977642      2479999999999887663

>4ex6_A ALNB; modified rossman fold, phosphatase, magnesium binding, hydro; 1.25A {Streptomyces SP} PDB: 4ex7_A

Probab=99.93  E-value=4.2e-25  Score=191.74  Aligned_cols=199  Identities=19%  Similarity=0.198  Sum_probs=147.0

Q ss_pred             ccCccEEEEeCCCCccCCCccHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHhCCCHHHHHHc--cCCCChhh----
Q 022360           11 AAKYDCLLFDLDDTLYPYSSGIAAACGQNIKDYMVEKLGIERSKIEDLGNLLYKNYGTTMAGLRAI--GYDFDYDD----   84 (298)
Q Consensus        11 ~~~~k~viFDlDGTL~d~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~--~~~~~~~~----   84 (298)
                      ..++|+|+|||||||+++...+..++...+.+     .|.....     ..+....|.........  +.......    
T Consensus        16 ~~~ik~i~fDlDGTL~d~~~~~~~~~~~~~~~-----~g~~~~~-----~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~   85 (237)
T 4ex6_A           16 AAADRGVILDLDGTLADTPAAIATITAEVLAA-----MGTAVSR-----GAILSTVGRPLPASLAGLLGVPVEDPRVAEA   85 (237)
T ss_dssp             -CCCEEEEECSBTTTBCCHHHHHHHHHHHHHH-----TTCCCCH-----HHHHHHTTSCHHHHHHHHHTSCTTSHHHHHH
T ss_pred             cccCCEEEEcCCCCCcCCHHHHHHHHHHHHHH-----cCCCCCH-----HHHHHhcCccHHHHHHHHhCCCCCHHHHHHH
Confidence            45689999999999999888777777764443     3422211     11222334433322111  11111111    


Q ss_pred             ---HHHHhhcccCC--CCCCCChhHHHHHHhCC---CcEEEEeCCChHHHHHHHHHhCCCCccceeEeecCCCCCCCCCC
Q 022360           85 ---YHSFVHGRLPY--ENLKPDPVLRSLLLSLP---LRKIIFTNADKVHAVKVLSRLGLEDCFEGIICFETLNPTHKNTV  156 (298)
Q Consensus        85 ---~~~~~~~~~~~--~~~~~~~g~~~~L~~l~---~~~~ivS~~~~~~~~~~l~~l~l~~~f~~i~~~~~~~~~~~~~~  156 (298)
                         +...+.+. ..  ....++||+.++|+.++   ++++++|++....++..++++++..+|+.++++++.+.      
T Consensus        86 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~------  158 (237)
T 4ex6_A           86 TEEYGRRFGAH-VRAAGPRLLYPGVLEGLDRLSAAGFRLAMATSKVEKAARAIAELTGLDTRLTVIAGDDSVER------  158 (237)
T ss_dssp             HHHHHHHHHHH-HHHHGGGGBCTTHHHHHHHHHHTTEEEEEECSSCHHHHHHHHHHHTGGGTCSEEECTTTSSS------
T ss_pred             HHHHHHHHHHh-cccccCCccCCCHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCchhheeeEEeCCCCCC------
Confidence               11111111 11  34568899999988874   78999999999999999999999999999999887664      


Q ss_pred             CCChhhHHHHHhhhcccCCCCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccch
Q 022360          157 SDDEDDIAFVESAASTTTSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNI  236 (298)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di  236 (298)
                                                                      +||++.+++.+++++|++|++|++|||+.||+
T Consensus       159 ------------------------------------------------~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di  190 (237)
T 4ex6_A          159 ------------------------------------------------GKPHPDMALHVARGLGIPPERCVVIGDGVPDA  190 (237)
T ss_dssp             ------------------------------------------------CTTSSHHHHHHHHHHTCCGGGEEEEESSHHHH
T ss_pred             ------------------------------------------------CCCCHHHHHHHHHHcCCCHHHeEEEcCCHHHH
Confidence                                                            79999999999999999999999999999999


Q ss_pred             HHHHHcCCeEEEecCCCC------CCCCCEEeCCHHHHHHHhHH
Q 022360          237 QAGKRVGLDTVLIGKSQR------VKGADYAFESIHNIKEAIPE  274 (298)
Q Consensus       237 ~~a~~aG~~~v~v~~~~~------~~~ad~i~~s~~~l~~~l~~  274 (298)
                      .||+.+|+.++++.++..      ...|++++.++.+|.++|+.
T Consensus       191 ~~a~~aG~~~i~v~~g~~~~~~~~~~~ad~v~~~~~el~~~l~~  234 (237)
T 4ex6_A          191 EMGRAAGMTVIGVSYGVSGPDELMRAGADTVVDSFPAAVTAVLD  234 (237)
T ss_dssp             HHHHHTTCEEEEESSSSSCHHHHHHTTCSEEESSHHHHHHHHHH
T ss_pred             HHHHHCCCeEEEEecCCCCHHHHHhcCCCEEECCHHHHHHHHHc
Confidence            999999999999987753      24899999999999998865

>3umc_A Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeruginosa}

Probab=99.92  E-value=1e-24  Score=190.95  Aligned_cols=204  Identities=16%  Similarity=0.228  Sum_probs=144.6

Q ss_pred             cccccccCccEEEEeCCCCccCCCccHHHHHHHHHHHHHHHHhCCChhHHHHHHHH------HHHHh-CC-----CH---
Q 022360            6 RYRMAAAKYDCLLFDLDDTLYPYSSGIAAACGQNIKDYMVEKLGIERSKIEDLGNL------LYKNY-GT-----TM---   70 (298)
Q Consensus         6 ~~~~~~~~~k~viFDlDGTL~d~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~------~~~~~-g~-----~~---   70 (298)
                      +..+..|++|+|+||+||||+++...+..++...     .+..|.+..........      ....+ ..     ..   
T Consensus        14 ~~~~~~m~ik~i~fDlDGTL~d~~~~~~~~~~~~-----~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   88 (254)
T 3umc_A           14 RENLYFQGMRAILFDVFGTLVDWRSSLIEQFQAL-----ERELGGTLPCVELTDRWRQQYKPAMDRVRNGQAPWQHLDQL   88 (254)
T ss_dssp             ---CCSSSCCEEEECCBTTTEEHHHHHHHHHHHH-----HHHSSSCCCHHHHHHHHHHHTHHHHHHHHTTSSCCCCHHHH
T ss_pred             CCcccccCCcEEEEeCCCccEecCccHHHHHHHH-----HHHhcCCCCHHHHHHHHHHHHHHHHHHHhcccCCcccHHHH
Confidence            3344456799999999999999777777766653     44456553322111110      00000 00     00   


Q ss_pred             ------HHHHHccCCCChhhHHHHhhcccCCCCCCCChhHHHHHHhCC--CcEEEEeCCChHHHHHHHHHhCCCCcccee
Q 022360           71 ------AGLRAIGYDFDYDDYHSFVHGRLPYENLKPDPVLRSLLLSLP--LRKIIFTNADKVHAVKVLSRLGLEDCFEGI  142 (298)
Q Consensus        71 ------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~L~~l~--~~~~ivS~~~~~~~~~~l~~l~l~~~f~~i  142 (298)
                            ..+...+..............   +....++|++.++|+.++  .+++++|+.....+...++.+++.  |+.+
T Consensus        89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~l~~l~~~~~~~i~s~~~~~~~~~~l~~~g~~--f~~~  163 (254)
T 3umc_A           89 HRQSLEALAGEFGLALDEALLQRITGF---WHRLRPWPDTLAGMHALKADYWLAALSNGNTALMLDVARHAGLP--WDML  163 (254)
T ss_dssp             HHHHHHHHHHHTTCCCCHHHHHHHHGG---GGSCEECTTHHHHHHHHTTTSEEEECCSSCHHHHHHHHHHHTCC--CSEE
T ss_pred             HHHHHHHHHHHhCCCCCHHHHHHHHHH---HhcCCCCccHHHHHHHHHhcCeEEEEeCCCHHHHHHHHHHcCCC--cceE
Confidence                  011222333333322222221   244677899999999886  678999999999999999999986  8988


Q ss_pred             EeecCCCCCCCCCCCCChhhHHHHHhhhcccCCCCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCC
Q 022360          143 ICFETLNPTHKNTVSDDEDDIAFVESAASTTTSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASIN  222 (298)
Q Consensus       143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~  222 (298)
                      +++++.+.                                                      +||++.+|+.+++++|++
T Consensus       164 ~~~~~~~~------------------------------------------------------~kp~~~~~~~~~~~lgi~  189 (254)
T 3umc_A          164 LCADLFGH------------------------------------------------------YKPDPQVYLGACRLLDLP  189 (254)
T ss_dssp             CCHHHHTC------------------------------------------------------CTTSHHHHHHHHHHHTCC
T ss_pred             Eeeccccc------------------------------------------------------CCCCHHHHHHHHHHcCCC
Confidence            88876654                                                      799999999999999999


Q ss_pred             CCcEEEEcCCccchHHHHHcCCeEEEec----CCC-------CCCCCCEEeCCHHHHHHHhH
Q 022360          223 PQRTLFFEDSVRNIQAGKRVGLDTVLIG----KSQ-------RVKGADYAFESIHNIKEAIP  273 (298)
Q Consensus       223 p~~~i~iGDs~~Di~~a~~aG~~~v~v~----~~~-------~~~~ad~i~~s~~~l~~~l~  273 (298)
                      |++|++|||+.||++||+.+|+.+++++    ++.       .+..||++++++.+|.++|.
T Consensus       190 ~~~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~g~~~~~~l~~~~~ad~v~~~l~el~~~l~  251 (254)
T 3umc_A          190 PQEVMLCAAHNYDLKAARALGLKTAFIARPLEYGPGQSQDLAAEQDWDLIASDLLDLHRQLA  251 (254)
T ss_dssp             GGGEEEEESCHHHHHHHHHTTCEEEEECCTTTTCTTCCSSSSCSSCCSEEESSHHHHHHHHH
T ss_pred             hHHEEEEcCchHhHHHHHHCCCeEEEEecCCccCCCCCcccccCCCCcEEECCHHHHHHHhc
Confidence            9999999999999999999999999997    443       25679999999999988774

>3umg_A Haloacid dehalogenase; defluorinase, hydrolase; 2.25A {Rhodococcus jostii}

Probab=99.92  E-value=1e-24  Score=190.23  Aligned_cols=205  Identities=17%  Similarity=0.234  Sum_probs=146.6

Q ss_pred             cccccccCccEEEEeCCCCccCCCccHHHHHHHHHHHHHHHHhCCChhHHHHHHH------HHHHHh--CC----CH---
Q 022360            6 RYRMAAAKYDCLLFDLDDTLYPYSSGIAAACGQNIKDYMVEKLGIERSKIEDLGN------LLYKNY--GT----TM---   70 (298)
Q Consensus         6 ~~~~~~~~~k~viFDlDGTL~d~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~------~~~~~~--g~----~~---   70 (298)
                      |..|.++++|+|+||+||||+++...+..++...     .++.|.+.........      ..+..+  +.    ..   
T Consensus         7 ~~~m~~~~~k~i~fDlDGTL~d~~~~~~~~~~~~-----~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (254)
T 3umg_A            7 RSPSTGRNVRAVLFDTFGTVVDWRTGIATAVADY-----AARHQLEVDAVAFADRWRARYQPSMDAILSGAREFVTLDIL   81 (254)
T ss_dssp             BCTTTCSBCCEEEECCBTTTBCHHHHHHHHHHHH-----HHHTTCCCCHHHHHHHHHTTHHHHHHHHHTTSSCCCCHHHH
T ss_pred             cccCCCCCceEEEEeCCCceecCchHHHHHHHHH-----HHHhcCCCCHHHHHHHHHHhHHHHHHHHHhcCCCCCCHHHH
Confidence            4445567799999999999999777777666653     3344554332211110      000000  00    00   


Q ss_pred             ------HHHHHccC---CCChhhHHHHhhcccCCCCCCCChhHHHHHHhCC--CcEEEEeCCChHHHHHHHHHhCCCCcc
Q 022360           71 ------AGLRAIGY---DFDYDDYHSFVHGRLPYENLKPDPVLRSLLLSLP--LRKIIFTNADKVHAVKVLSRLGLEDCF  139 (298)
Q Consensus        71 ------~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~g~~~~L~~l~--~~~~ivS~~~~~~~~~~l~~l~l~~~f  139 (298)
                            ..+...+.   .............   +....++|++.++|+.++  .+++++|++....++..++.+++.  |
T Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~l~~l~~~~~~~i~t~~~~~~~~~~l~~~~~~--f  156 (254)
T 3umg_A           82 HRENLDFVLRESGIDPTNHDSGELDELARA---WHVLTPWPDSVPGLTAIKAEYIIGPLSNGNTSLLLDMAKNAGIP--W  156 (254)
T ss_dssp             HHHHHHHHHHHTTCCGGGSCHHHHHHHHGG---GGSCCBCTTHHHHHHHHHHHSEEEECSSSCHHHHHHHHHHHTCC--C
T ss_pred             HHHHHHHHHHHhCCCcCcCCHHHHHHHHHH---HhhCcCCcCHHHHHHHHHhCCeEEEEeCCCHHHHHHHHHhCCCC--e
Confidence                  01112222   2222222222221   245678999999998876  788999999999999999999986  8


Q ss_pred             ceeEeecCCCCCCCCCCCCChhhHHHHHhhhcccCCCCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHc
Q 022360          140 EGIICFETLNPTHKNTVSDDEDDIAFVESAASTTTSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIA  219 (298)
Q Consensus       140 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l  219 (298)
                      +.++++++.+.                                                      +||++.+++.+++++
T Consensus       157 ~~~~~~~~~~~------------------------------------------------------~kp~~~~~~~~~~~l  182 (254)
T 3umg_A          157 DVIIGSDINRK------------------------------------------------------YKPDPQAYLRTAQVL  182 (254)
T ss_dssp             SCCCCHHHHTC------------------------------------------------------CTTSHHHHHHHHHHT
T ss_pred             eEEEEcCcCCC------------------------------------------------------CCCCHHHHHHHHHHc
Confidence            88888776654                                                      799999999999999


Q ss_pred             CCCCCcEEEEcCCccchHHHHHcCCeEEEec----CCC-------CCCCCCEEeCCHHHHHHHhHH
Q 022360          220 SINPQRTLFFEDSVRNIQAGKRVGLDTVLIG----KSQ-------RVKGADYAFESIHNIKEAIPE  274 (298)
Q Consensus       220 ~i~p~~~i~iGDs~~Di~~a~~aG~~~v~v~----~~~-------~~~~ad~i~~s~~~l~~~l~~  274 (298)
                      |++|++|++|||+.||++||+.+|+.+++++    ++.       ....+|++++|+.+|.++|..
T Consensus       183 gi~~~~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~g~~~~~~~~~~~~~d~~~~~~~el~~~l~~  248 (254)
T 3umg_A          183 GLHPGEVMLAAAHNGDLEAAHATGLATAFILRPVEHGPHQTDDLAPTGSWDISATDITDLAAQLRA  248 (254)
T ss_dssp             TCCGGGEEEEESCHHHHHHHHHTTCEEEEECCTTTTCTTCCSCSSCSSCCSEEESSHHHHHHHHHH
T ss_pred             CCChHHEEEEeCChHhHHHHHHCCCEEEEEecCCcCCCCccccccccCCCceEECCHHHHHHHhcC
Confidence            9999999999999999999999999999997    443       257789999999999998865

>2hdo_A Phosphoglycolate phosphatase; NP_784602.1, structur genomics, PSI-2, protein structure initiative, joint center structural genomics; HET: MSE; 1.50A {Lactobacillus plantarum} SCOP: c.108.1.6

Probab=99.92  E-value=9.9e-25  Score=186.33  Aligned_cols=194  Identities=21%  Similarity=0.254  Sum_probs=143.5

Q ss_pred             CccEEEEeCCCCccCCCccHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHhCCCHHHH-HHccCCCChhhHH----H
Q 022360           13 KYDCLLFDLDDTLYPYSSGIAAACGQNIKDYMVEKLGIERSKIEDLGNLLYKNYGTTMAGL-RAIGYDFDYDDYH----S   87 (298)
Q Consensus        13 ~~k~viFDlDGTL~d~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~-~~~~~~~~~~~~~----~   87 (298)
                      ++|+|+||+||||+++...+...+.+.     .++.|......     .+....|.....+ ..++..  ...+.    .
T Consensus         3 ~~k~iifDlDGTL~d~~~~~~~~~~~~-----~~~~g~~~~~~-----~~~~~~g~~~~~~~~~~~~~--~~~~~~~~~~   70 (209)
T 2hdo_A            3 TYQALMFDIDGTLTNSQPAYTTVMREV-----LATYGKPFSPA-----QAQKTFPMAAEQAMTELGIA--ASEFDHFQAQ   70 (209)
T ss_dssp             CCSEEEECSBTTTEECHHHHHHHHHHH-----HHTTTCCCCHH-----HHHHHTTSCHHHHHHHTTCC--GGGHHHHHHH
T ss_pred             cccEEEEcCCCCCcCCHHHHHHHHHHH-----HHHhCCCCCHH-----HHHHHcCCcHHHHHHHcCCC--HHHHHHHHHH
Confidence            579999999999999877777766653     33456543221     1222344443332 233322  12221    1


Q ss_pred             Hhhccc-CCCCCCCChhHHHHHHhCC--CcEEEEeCCChHHHHHHHHHhCCCCccceeEeecCCCCCCCCCCCCChhhHH
Q 022360           88 FVHGRL-PYENLKPDPVLRSLLLSLP--LRKIIFTNADKVHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSDDEDDIA  164 (298)
Q Consensus        88 ~~~~~~-~~~~~~~~~g~~~~L~~l~--~~~~ivS~~~~~~~~~~l~~l~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~  164 (298)
                      ...... ......++|++.++|+.++  ++++++|++....++..++++++..+|+.++++++.+.              
T Consensus        71 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~--------------  136 (209)
T 2hdo_A           71 YEDVMASHYDQIELYPGITSLFEQLPSELRLGIVTSQRRNELESGMRSYPFMMRMAVTISADDTPK--------------  136 (209)
T ss_dssp             HHHHHTTCGGGCEECTTHHHHHHHSCTTSEEEEECSSCHHHHHHHHTTSGGGGGEEEEECGGGSSC--------------
T ss_pred             HHHHHhhhcccCCcCCCHHHHHHHHHhcCcEEEEeCCCHHHHHHHHHHcChHhhccEEEecCcCCC--------------
Confidence            111100 1245678999999999886  57889999999999999999999999999999887664              


Q ss_pred             HHHhhhcccCCCCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHHcCC
Q 022360          165 FVESAASTTTSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGL  244 (298)
Q Consensus       165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a~~aG~  244 (298)
                                                              .||++.++..+++++|++|++|++|||+.||+.+|+.+|+
T Consensus       137 ----------------------------------------~KP~~~~~~~~~~~~~~~~~~~i~vGD~~~Di~~a~~aG~  176 (209)
T 2hdo_A          137 ----------------------------------------RKPDPLPLLTALEKVNVAPQNALFIGDSVSDEQTAQAANV  176 (209)
T ss_dssp             ----------------------------------------CTTSSHHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTC
T ss_pred             ----------------------------------------CCCCcHHHHHHHHHcCCCcccEEEECCChhhHHHHHHcCC
Confidence                                                    7999999999999999999999999999999999999999


Q ss_pred             eEEEecCCCC----CCCCCEEeCCHHHHHHHh
Q 022360          245 DTVLIGKSQR----VKGADYAFESIHNIKEAI  272 (298)
Q Consensus       245 ~~v~v~~~~~----~~~ad~i~~s~~~l~~~l  272 (298)
                      .+++++++..    ...+++++.++.+|.++|
T Consensus       177 ~~~~~~~~~~~~~~~~~a~~~~~~~~el~~~l  208 (209)
T 2hdo_A          177 DFGLAVWGMDPNADHQKVAHRFQKPLDILELF  208 (209)
T ss_dssp             EEEEEGGGCCTTGGGSCCSEEESSGGGGGGGC
T ss_pred             eEEEEcCCCCChhhhccCCEEeCCHHHHHHhh
Confidence            9999975432    222999999999987654

>3umb_A Dehalogenase-like hydrolase; 2.20A {Ralstonia solanacearum}

Probab=99.92  E-value=5.5e-25  Score=190.31  Aligned_cols=125  Identities=14%  Similarity=0.153  Sum_probs=111.9

Q ss_pred             CCCCChhHHHHHHhCC---CcEEEEeCCChHHHHHHHHHhCCCCccceeEeecCCCCCCCCCCCCChhhHHHHHhhhccc
Q 022360           97 NLKPDPVLRSLLLSLP---LRKIIFTNADKVHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSDDEDDIAFVESAASTT  173 (298)
Q Consensus        97 ~~~~~~g~~~~L~~l~---~~~~ivS~~~~~~~~~~l~~l~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  173 (298)
                      ...++|++.++|+.++   ++++++|++....++..++.+++..+|+.++++++.+.                       
T Consensus        97 ~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~-----------------------  153 (233)
T 3umb_A           97 CLSAFPENVPVLRQLREMGLPLGILSNGNPQMLEIAVKSAGMSGLFDHVLSVDAVRL-----------------------  153 (233)
T ss_dssp             SCEECTTHHHHHHHHHTTTCCEEEEESSCHHHHHHHHHTTTCTTTCSEEEEGGGTTC-----------------------
T ss_pred             cCCCCCCHHHHHHHHHhCCCcEEEEeCCCHHHHHHHHHHCCcHhhcCEEEEecccCC-----------------------
Confidence            4678899999988774   78999999999999999999999999999999887765                       


Q ss_pred             CCCCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHHcCCeEEEecCCC
Q 022360          174 TSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTVLIGKSQ  253 (298)
Q Consensus       174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a~~aG~~~v~v~~~~  253 (298)
                                                     +||+|.++..+++++|++|++|++|||+.+|+.+|+.+|+.++++.++.
T Consensus       154 -------------------------------~kp~~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~~G~~~~~v~~~~  202 (233)
T 3umb_A          154 -------------------------------YKTAPAAYALAPRAFGVPAAQILFVSSNGWDACGATWHGFTTFWINRLG  202 (233)
T ss_dssp             -------------------------------CTTSHHHHTHHHHHHTSCGGGEEEEESCHHHHHHHHHHTCEEEEECTTC
T ss_pred             -------------------------------CCcCHHHHHHHHHHhCCCcccEEEEeCCHHHHHHHHHcCCEEEEEcCCC
Confidence                                           7999999999999999999999999999999999999999999986654


Q ss_pred             C-----CCCCCEEeCCHHHHHHHhHHh
Q 022360          254 R-----VKGADYAFESIHNIKEAIPEL  275 (298)
Q Consensus       254 ~-----~~~ad~i~~s~~~l~~~l~~~  275 (298)
                      .     +..|+++++++.+|.++|.+.
T Consensus       203 ~~~~~~~~~~~~v~~~~~el~~~l~~~  229 (233)
T 3umb_A          203 HPPEALDVAPAAAGHDMRDLLQFVQAR  229 (233)
T ss_dssp             CCCCSSSCCCSEEESSHHHHHHHHHC-
T ss_pred             CCchhccCCCCEEECCHHHHHHHHHHh
Confidence            2     456999999999999988653

>2no4_A (S)-2-haloacid dehalogenase IVA; HAD superfamily, rossman fold, hydrol; 1.93A {Burkholderia cepacia} PDB: 2no5_A*

Probab=99.92  E-value=2.8e-24  Score=187.62  Aligned_cols=126  Identities=16%  Similarity=0.204  Sum_probs=111.4

Q ss_pred             CCCCChhHHHHHHhC---CCcEEEEeCCChHHHHHHHHHhCCCCccceeEeecCCCCCCCCCCCCChhhHHHHHhhhccc
Q 022360           97 NLKPDPVLRSLLLSL---PLRKIIFTNADKVHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSDDEDDIAFVESAASTT  173 (298)
Q Consensus        97 ~~~~~~g~~~~L~~l---~~~~~ivS~~~~~~~~~~l~~l~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  173 (298)
                      ...++||+.++|+.+   +++++++|++....++..++.+|+..+|+.++++++.+.                       
T Consensus       103 ~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~-----------------------  159 (240)
T 2no4_A          103 ELSAYPDAAETLEKLKSAGYIVAILSNGNDEMLQAALKASKLDRVLDSCLSADDLKI-----------------------  159 (240)
T ss_dssp             TCCBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCSEEEEGGGTTC-----------------------
T ss_pred             cCCCCCCHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHhcCcHHHcCEEEEccccCC-----------------------
Confidence            467889999998877   478999999999999999999999999999999887765                       


Q ss_pred             CCCCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHHcCCeEEEecCCC
Q 022360          174 TSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTVLIGKSQ  253 (298)
Q Consensus       174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a~~aG~~~v~v~~~~  253 (298)
                                                     +||+|.++..+++++|++|++|++|||+.+|+.+|+.+|+.++++.++.
T Consensus       160 -------------------------------~Kp~~~~~~~~~~~~~~~~~~~~~iGD~~~Di~~a~~aG~~~~~v~~~~  208 (240)
T 2no4_A          160 -------------------------------YKPDPRIYQFACDRLGVNPNEVCFVSSNAWDLGGAGKFGFNTVRINRQG  208 (240)
T ss_dssp             -------------------------------CTTSHHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHHHTCEEEEECTTC
T ss_pred             -------------------------------CCCCHHHHHHHHHHcCCCcccEEEEeCCHHHHHHHHHCCCEEEEECCCC
Confidence                                           7999999999999999999999999999999999999999999997764


Q ss_pred             C----CCCC-CEEeCCHHHHHHHhHHhh
Q 022360          254 R----VKGA-DYAFESIHNIKEAIPELW  276 (298)
Q Consensus       254 ~----~~~a-d~i~~s~~~l~~~l~~~~  276 (298)
                      .    ...+ +++++++.+|.+.|.++.
T Consensus       209 ~~~~~~~~~~~~~~~~~~el~~~l~~~~  236 (240)
T 2no4_A          209 NPPEYEFAPLKHQVNSLSELWPLLAKNV  236 (240)
T ss_dssp             CCCCCTTSCCSEEESSGGGHHHHHCC--
T ss_pred             CCCcccCCCCceeeCCHHHHHHHHHHhh
Confidence            3    3457 999999999998886554

>3iru_A Phoshonoacetaldehyde hydrolase like protein; phosphonoacetaldehyde hydrolase like P structural genomics, PSI-2, protein structure initiative; 2.30A {Oleispira antarctica} SCOP: c.108.1.0

Probab=99.92  E-value=1.3e-24  Score=192.56  Aligned_cols=204  Identities=17%  Similarity=0.160  Sum_probs=148.1

Q ss_pred             cccCccEEEEeCCCCccCCCccH-HHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHhCCCHHH---------------H
Q 022360           10 AAAKYDCLLFDLDDTLYPYSSGI-AAACGQNIKDYMVEKLGIERSKIEDLGNLLYKNYGTTMAG---------------L   73 (298)
Q Consensus        10 ~~~~~k~viFDlDGTL~d~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~---------------~   73 (298)
                      +++++|+|+||+||||+++...+ ..++..     ..+..|+......     .....+.....               .
T Consensus        10 ~~~~~k~i~fDlDGTL~d~~~~~~~~~~~~-----~~~~~g~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (277)
T 3iru_A           10 CAGPVEALILDWAGTTIDFGSLAPVYAFME-----LFKQEGIEVTQAE-----AREPMGTEKSEHIRRMLGNSRIANAWL   79 (277)
T ss_dssp             CCCCCCEEEEESBTTTBSTTCCHHHHHHHH-----HHHTTTCCCCHHH-----HHTTTTSCHHHHHHHHTTSHHHHHHHH
T ss_pred             hhccCcEEEEcCCCCcccCCcccHHHHHHH-----HHHHhCCCCCHHH-----HHHHhcCchHHHHHHhccchHHHHHHH
Confidence            34568999999999999987765 455553     3444566532211     11111221111               0


Q ss_pred             HHccCCCChhhHHHHhhc------ccCCCCCCCChhHHHHHHhCC---CcEEEEeCCChHHHHHHHHHhCCCCc-cceeE
Q 022360           74 RAIGYDFDYDDYHSFVHG------RLPYENLKPDPVLRSLLLSLP---LRKIIFTNADKVHAVKVLSRLGLEDC-FEGII  143 (298)
Q Consensus        74 ~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~g~~~~L~~l~---~~~~ivS~~~~~~~~~~l~~l~l~~~-f~~i~  143 (298)
                      ...+...+.+.+......      ........++||+.++|+.++   ++++++|+.....++..++.+++..+ |+.++
T Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~tn~~~~~~~~~l~~~~~~~~~~~~~~  159 (277)
T 3iru_A           80 SIKGQASNEEDIKRLYDLFAPIQTRIVAQRSQLIPGWKEVFDKLIAQGIKVGGNTGYGPGMMAPALIAAKEQGYTPASTV  159 (277)
T ss_dssp             HHHSSCCCHHHHHHHHHHHHHHHHHHHHHTCCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHHHTTCCCSEEE
T ss_pred             HHhccCCCHHHHHHHHHHHHHHHHHHhhccCccCcCHHHHHHHHHHcCCeEEEEeCCchHHHHHHHHhcCcccCCCceEe
Confidence            122333333332221111      001133678899999988774   78999999999999999999998888 89999


Q ss_pred             eecCCCCCCCCCCCCChhhHHHHHhhhcccCCCCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCCC
Q 022360          144 CFETLNPTHKNTVSDDEDDIAFVESAASTTTSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINP  223 (298)
Q Consensus       144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~p  223 (298)
                      ++++.+.                                                      +||++.++..+++++|++|
T Consensus       160 ~~~~~~~------------------------------------------------------~kp~~~~~~~~~~~lgi~~  185 (277)
T 3iru_A          160 FATDVVR------------------------------------------------------GRPFPDMALKVALELEVGH  185 (277)
T ss_dssp             CGGGSSS------------------------------------------------------CTTSSHHHHHHHHHHTCSC
T ss_pred             cHHhcCC------------------------------------------------------CCCCHHHHHHHHHHcCCCC
Confidence            8887664                                                      7999999999999999999


Q ss_pred             -CcEEEEcCCccchHHHHHcCCeEEEecCCCC-----------------------------CCCCCEEeCCHHHHHHHhH
Q 022360          224 -QRTLFFEDSVRNIQAGKRVGLDTVLIGKSQR-----------------------------VKGADYAFESIHNIKEAIP  273 (298)
Q Consensus       224 -~~~i~iGDs~~Di~~a~~aG~~~v~v~~~~~-----------------------------~~~ad~i~~s~~~l~~~l~  273 (298)
                       ++|++|||+.||++||+.+|+.++++.++..                             ...||++++++.+|.++|.
T Consensus       186 ~~~~i~vGD~~~Di~~a~~aG~~~v~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ad~v~~~~~el~~~l~  265 (277)
T 3iru_A          186 VNGCIKVDDTLPGIEEGLRAGMWTVGVSCSGNEVGLDREDWQALSSDEQQSYRQHAEQRLFNAGAHYVIDSVADLETVIT  265 (277)
T ss_dssp             GGGEEEEESSHHHHHHHHHTTCEEEEECSSSTTTCCCHHHHHHSCHHHHHHHHHHHHHHHHHHTCSEEESSGGGTHHHHH
T ss_pred             CccEEEEcCCHHHHHHHHHCCCeEEEEecCCcccccchhhhhhcchhhhhhhhhhhHHHHhhCCCCEEecCHHHHHHHHH
Confidence             9999999999999999999999999988742                             3569999999999999998


Q ss_pred             Hhhc
Q 022360          274 ELWE  277 (298)
Q Consensus       274 ~~~~  277 (298)
                      ++..
T Consensus       266 ~~~~  269 (277)
T 3iru_A          266 DVNR  269 (277)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            7744

>2hoq_A Putative HAD-hydrolase PH1655; haloacid dehalogenase, structural genomics, NPPSFA, national on protein structural and functional analyses; 1.70A {Pyrococcus horikoshii}

Probab=99.92  E-value=3.1e-24  Score=187.62  Aligned_cols=205  Identities=26%  Similarity=0.322  Sum_probs=146.1

Q ss_pred             ccEEEEeCCCCccCCCccHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHH---HhCC----CHHHH-HHc-cCCCC--h
Q 022360           14 YDCLLFDLDDTLYPYSSGIAAACGQNIKDYMVEKLGIERSKIEDLGNLLYK---NYGT----TMAGL-RAI-GYDFD--Y   82 (298)
Q Consensus        14 ~k~viFDlDGTL~d~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~---~~g~----~~~~~-~~~-~~~~~--~   82 (298)
                      +|+|+|||||||+++...+...+...+.++..  .++...... ....+..   ....    ....+ ..+ +....  .
T Consensus         2 ~k~iiFDlDGTL~d~~~~~~~~~~~~~~~~~~--~~~~~~~~~-~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (241)
T 2hoq_A            2 VKVIFFDLDDTLVDTSKLAEIARKNAIENMIR--HGLPVDFET-AYSELIELIKEYGSNFPYHFDYLLRRLDLPYNPKWI   78 (241)
T ss_dssp             CCEEEECSBTTTBCHHHHHHHHHHHHHHHHHH--TTCCSCHHH-HHHHHHHHHHHHCTTCTTHHHHHHHHTTCCCCHHHH
T ss_pred             ccEEEEcCCCCCCCChhhHHHHHHHHHHHHHH--ccccccHHH-HHHHHHHhhcccchhHHHHHHHHHHHhcCCccchHH
Confidence            68999999999999888887777776666422  233222111 1111100   0000    01111 122 22211  1


Q ss_pred             hhHHHHhhcccCCCCCCCChhHHHHHHhCC---CcEEEEeCCChHHHHHHHHHhCCCCccceeEeecCCCCCCCCCCCCC
Q 022360           83 DDYHSFVHGRLPYENLKPDPVLRSLLLSLP---LRKIIFTNADKVHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSDD  159 (298)
Q Consensus        83 ~~~~~~~~~~~~~~~~~~~~g~~~~L~~l~---~~~~ivS~~~~~~~~~~l~~l~l~~~f~~i~~~~~~~~~~~~~~~~~  159 (298)
                      ..+...+.... .....++||+.++|+.|+   ++++++|++....++..++.+++..+|+.++++++.+.         
T Consensus        79 ~~~~~~~~~~~-~~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~---------  148 (241)
T 2hoq_A           79 SAGVIAYHNTK-FAYLREVPGARKVLIRLKELGYELGIITDGNPVKQWEKILRLELDDFFEHVIISDFEGV---------  148 (241)
T ss_dssp             HHHHHHHHHHH-HHHCCBCTTHHHHHHHHHHHTCEEEEEECSCHHHHHHHHHHTTCGGGCSEEEEGGGGTC---------
T ss_pred             HHHHHHHHHHH-HhhCCCCccHHHHHHHHHHCCCEEEEEECCCchhHHHHHHHcCcHhhccEEEEeCCCCC---------
Confidence            12222222111 123567899999998874   78999999999999999999999999999999887765         


Q ss_pred             hhhHHHHHhhhcccCCCCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCc-cchHH
Q 022360          160 EDDIAFVESAASTTTSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSV-RNIQA  238 (298)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~p~~~i~iGDs~-~Di~~  238 (298)
                                                                   +||+|.++..+++++|++|++|++|||+. ||+.|
T Consensus       149 ---------------------------------------------~Kp~~~~~~~~~~~~g~~~~~~i~iGD~~~~Di~~  183 (241)
T 2hoq_A          149 ---------------------------------------------KKPHPKIFKKALKAFNVKPEEALMVGDRLYSDIYG  183 (241)
T ss_dssp             ---------------------------------------------CTTCHHHHHHHHHHHTCCGGGEEEEESCTTTTHHH
T ss_pred             ---------------------------------------------CCCCHHHHHHHHHHcCCCcccEEEECCCchHhHHH
Confidence                                                         79999999999999999999999999998 99999


Q ss_pred             HHHcCCeEEEecCCCC----C---CCCCEEeCCHHHHHHHhHHhh
Q 022360          239 GKRVGLDTVLIGKSQR----V---KGADYAFESIHNIKEAIPELW  276 (298)
Q Consensus       239 a~~aG~~~v~v~~~~~----~---~~ad~i~~s~~~l~~~l~~~~  276 (298)
                      |+.+|+.++++.++..    .   ..++++++++.+|.++|.++.
T Consensus       184 a~~aG~~~~~v~~g~~~~~~~~~~~~~~~~i~~~~el~~~l~~~~  228 (241)
T 2hoq_A          184 AKRVGMKTVWFRYGKHSERELEYRKYADYEIDNLESLLEVLARES  228 (241)
T ss_dssp             HHHTTCEEEEECCSCCCHHHHTTGGGCSEEESSTTHHHHHHHHCC
T ss_pred             HHHCCCEEEEECCCCCCcccccccCCCCEEECCHHHHHHHHHHHh
Confidence            9999999999976653    2   279999999999999887653

>2fdr_A Conserved hypothetical protein; SAD, structural genomics, agrobacter tumefaciens, HAD-superfamily hydrolase; 2.00A {Agrobacterium tumefaciens str} SCOP: c.108.1.6

Probab=99.92  E-value=9.5e-25  Score=188.03  Aligned_cols=201  Identities=19%  Similarity=0.230  Sum_probs=147.7

Q ss_pred             CccEEEEeCCCCccCCCccHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHhCCCHHHH-----HHccCCCChhh---
Q 022360           13 KYDCLLFDLDDTLYPYSSGIAAACGQNIKDYMVEKLGIERSKIEDLGNLLYKNYGTTMAGL-----RAIGYDFDYDD---   84 (298)
Q Consensus        13 ~~k~viFDlDGTL~d~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~-----~~~~~~~~~~~---   84 (298)
                      ++|+|+||+||||+++...+...+.+.     .+..|........    .....|......     ...+.......   
T Consensus         3 ~ik~i~fDlDGTL~d~~~~~~~~~~~~-----~~~~g~~~~~~~~----~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~   73 (229)
T 2fdr_A            3 GFDLIIFDCDGVLVDSEIIAAQVESRL-----LTEAGYPISVEEM----GERFAGMTWKNILLQVESEASIPLSASLLDK   73 (229)
T ss_dssp             CCSEEEECSBTTTBCCHHHHHHHHHHH-----HHHTTCCCCHHHH----HHHHTTCCHHHHHHHHHHHHCCCCCTHHHHH
T ss_pred             CccEEEEcCCCCcCccHHHHHHHHHHH-----HHHhCCCCCHHHH----HHHHhCCCHHHHHHHHHHHcCCCCCHHHHHH
Confidence            479999999999999877776666653     3445655432111    111223322111     12222222211   


Q ss_pred             HHHHhhcccCCCCCCCChhHHHHHHhCCCcEEEEeCCChHHHHHHHHHhCCCCcc-ceeEeecCCCCCCCCCCCCChhhH
Q 022360           85 YHSFVHGRLPYENLKPDPVLRSLLLSLPLRKIIFTNADKVHAVKVLSRLGLEDCF-EGIICFETLNPTHKNTVSDDEDDI  163 (298)
Q Consensus        85 ~~~~~~~~~~~~~~~~~~g~~~~L~~l~~~~~ivS~~~~~~~~~~l~~l~l~~~f-~~i~~~~~~~~~~~~~~~~~~~~~  163 (298)
                      +...+.+.. .....++|++.++|+.++.+++++|++....++..++++++..+| +.++++++.+.             
T Consensus        74 ~~~~~~~~~-~~~~~~~~~~~~~l~~l~~~~~i~s~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~-------------  139 (229)
T 2fdr_A           74 SEKLLDMRL-ERDVKIIDGVKFALSRLTTPRCICSNSSSHRLDMMLTKVGLKPYFAPHIYSAKDLGA-------------  139 (229)
T ss_dssp             HHHHHHHHH-HHHCCBCTTHHHHHHHCCSCEEEEESSCHHHHHHHHHHTTCGGGTTTCEEEHHHHCT-------------
T ss_pred             HHHHHHHHh-hcCCccCcCHHHHHHHhCCCEEEEECCChhHHHHHHHhCChHHhccceEEecccccc-------------
Confidence            111111111 123577899999999999899999999999999999999999999 88888876553             


Q ss_pred             HHHHhhhcccCCCCCCchhhhccccCCCCCCcccCCCCCCCC--CCCHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHH
Q 022360          164 AFVESAASTTTSANGPQIFDIIGHFAQPNPSLVALPKTPIAC--KPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKR  241 (298)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a~~  241 (298)
                                                               +  ||++.+++.+++++|++|++|++|||+.||++||+.
T Consensus       140 -----------------------------------------~~~kpk~~~~~~~~~~l~~~~~~~i~iGD~~~Di~~a~~  178 (229)
T 2fdr_A          140 -----------------------------------------DRVKPKPDIFLHGAAQFGVSPDRVVVVEDSVHGIHGARA  178 (229)
T ss_dssp             -----------------------------------------TCCTTSSHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHH
T ss_pred             -----------------------------------------CCCCcCHHHHHHHHHHcCCChhHeEEEcCCHHHHHHHHH
Confidence                                                     7  999999999999999999999999999999999999


Q ss_pred             cCCeEEEecCCCCC---------C-CCCEEeCCHHHHHHHhHHhhc
Q 022360          242 VGLDTVLIGKSQRV---------K-GADYAFESIHNIKEAIPELWE  277 (298)
Q Consensus       242 aG~~~v~v~~~~~~---------~-~ad~i~~s~~~l~~~l~~~~~  277 (298)
                      +|+.++++.++...         . .|++++.++.+|.++|.+++.
T Consensus       179 aG~~~i~~~~~~~~~~~~~~~l~~~~ad~v~~~~~el~~~l~~~~~  224 (229)
T 2fdr_A          179 AGMRVIGFTGASHTYPSHADRLTDAGAETVISRMQDLPAVIAAMAE  224 (229)
T ss_dssp             TTCEEEEECCSTTCCTTHHHHHHHHTCSEEESCGGGHHHHHHHHTC
T ss_pred             CCCEEEEEecCCccchhhhHHHhhcCCceeecCHHHHHHHHHHhhh
Confidence            99999999776541         1 399999999999999988864

>3u26_A PF00702 domain protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, unknown function; 1.59A {Pyrococcus horikoshii} SCOP: c.108.1.1 PDB: 1x42_A

Probab=99.92  E-value=2.4e-24  Score=186.07  Aligned_cols=127  Identities=22%  Similarity=0.348  Sum_probs=114.2

Q ss_pred             CCCCChhHHHHHHhCC--CcEEEEeCCChHHHHHHHHHhCCCCccceeEeecCCCCCCCCCCCCChhhHHHHHhhhcccC
Q 022360           97 NLKPDPVLRSLLLSLP--LRKIIFTNADKVHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSDDEDDIAFVESAASTTT  174 (298)
Q Consensus        97 ~~~~~~g~~~~L~~l~--~~~~ivS~~~~~~~~~~l~~l~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  174 (298)
                      ...++|++.++|+.++  .+++++|++....+...++.+++..+|+.++++++.+.                        
T Consensus        98 ~~~~~~~~~~~l~~l~~~~~~~i~t~~~~~~~~~~l~~~~~~~~f~~~~~~~~~~~------------------------  153 (234)
T 3u26_A           98 YGELYPEVVEVLKSLKGKYHVGMITDSDTEQAMAFLDALGIKDLFDSITTSEEAGF------------------------  153 (234)
T ss_dssp             HCCBCTTHHHHHHHHTTTSEEEEEESSCHHHHHHHHHHTTCGGGCSEEEEHHHHTB------------------------
T ss_pred             hCCcCcCHHHHHHHHHhCCcEEEEECCCHHHHHHHHHHcCcHHHcceeEeccccCC------------------------
Confidence            3578899999999876  67889999999999999999999999999999887664                        


Q ss_pred             CCCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCc-cchHHHHHcCCeEEEecCCC
Q 022360          175 SANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSV-RNIQAGKRVGLDTVLIGKSQ  253 (298)
Q Consensus       175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~p~~~i~iGDs~-~Di~~a~~aG~~~v~v~~~~  253 (298)
                                                    +||++.+++.+++++|++|++|++|||+. ||++||+.+|+.++++.++.
T Consensus       154 ------------------------------~kp~~~~~~~~~~~~~~~~~~~~~vGD~~~~Di~~a~~aG~~~~~v~~~~  203 (234)
T 3u26_A          154 ------------------------------FKPHPRIFELALKKAGVKGEEAVYVGDNPVKDCGGSKNLGMTSILLDRKG  203 (234)
T ss_dssp             ------------------------------CTTSHHHHHHHHHHHTCCGGGEEEEESCTTTTHHHHHTTTCEEEEECSSS
T ss_pred             ------------------------------CCcCHHHHHHHHHHcCCCchhEEEEcCCcHHHHHHHHHcCCEEEEECCCC
Confidence                                          79999999999999999999999999998 99999999999999997765


Q ss_pred             C----CCCCCEEeCCHHHHHHHhHHhhc
Q 022360          254 R----VKGADYAFESIHNIKEAIPELWE  277 (298)
Q Consensus       254 ~----~~~ad~i~~s~~~l~~~l~~~~~  277 (298)
                      .    ...|+++++++.+|.++|+++..
T Consensus       204 ~~~~~~~~a~~~~~~~~el~~~l~~~~~  231 (234)
T 3u26_A          204 EKREFWDKCDFIVSDLREVIKIVDELNG  231 (234)
T ss_dssp             TTGGGGGGCSEEESSTHHHHHHHHHHC-
T ss_pred             CccccccCCCEeeCCHHHHHHHHHHHhh
Confidence            3    34899999999999999988754

>2om6_A Probable phosphoserine phosphatase; rossmann fold, B-hairpin, four-helix bundle, structural GENO NPPSFA; 2.20A {Pyrococcus horikoshii}

Probab=99.92  E-value=4.2e-24  Score=184.19  Aligned_cols=203  Identities=16%  Similarity=0.182  Sum_probs=142.8

Q ss_pred             CccEEEEeCCCCccCCCccHHHHHHHHHHHHHHHHhCCChhHHH--HHHH---HHHHH---hCCCHH----H---H-HHc
Q 022360           13 KYDCLLFDLDDTLYPYSSGIAAACGQNIKDYMVEKLGIERSKIE--DLGN---LLYKN---YGTTMA----G---L-RAI   76 (298)
Q Consensus        13 ~~k~viFDlDGTL~d~~~~~~~~~~~~~~~~~~~~~g~~~~~~~--~~~~---~~~~~---~g~~~~----~---~-~~~   76 (298)
                      ++|+|+||+||||+++...+...+...     .+..|.......  ....   ..+..   .|....    .   + ...
T Consensus         3 m~k~i~fDlDGTL~d~~~~~~~~~~~~-----~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~   77 (235)
T 2om6_A            3 EVKLVTFDVWNTLLDLNIMLDEFSHQL-----AKISGLHIKDVANAVIEVRNEIKKMRAQASEDPRKVLTGSQEALAGKL   77 (235)
T ss_dssp             CCCEEEECCBTTTBCHHHHHHHHHHHH-----HHHHTCCHHHHHHHHHHHHHHHHHHHHTTCCCTTTHHHHHHHHHHHHH
T ss_pred             CceEEEEeCCCCCCCcchhHHHHHHHH-----HHHcCCCCcHHHHHHHHHHHHHHHHhhhhcCCCcchHHHHHHHHHHHh
Confidence            379999999999999777666666653     334465543221  0110   00111   133322    1   1 112


Q ss_pred             cCCC-ChhhHHHHhhcccCCCCCCCChhHHHHHHhC---CCcEEEEeCCC---hHHHHHHHHHhCCCCccceeEeecCCC
Q 022360           77 GYDF-DYDDYHSFVHGRLPYENLKPDPVLRSLLLSL---PLRKIIFTNAD---KVHAVKVLSRLGLEDCFEGIICFETLN  149 (298)
Q Consensus        77 ~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~~~L~~l---~~~~~ivS~~~---~~~~~~~l~~l~l~~~f~~i~~~~~~~  149 (298)
                      +... ....+.......  +....++|++.++|+.+   +++++++|++.   ...++..++.+++..+|+.++++++.+
T Consensus        78 ~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~  155 (235)
T 2om6_A           78 KVDVELVKRATARAILN--VDESLVLEGTKEALQFVKERGLKTAVIGNVMFWPGSYTRLLLERFGLMEFIDKTFFADEVL  155 (235)
T ss_dssp             TCCHHHHHHHHHHHHHH--CCGGGBCTTHHHHHHHHHHTTCEEEEEECCCSSCHHHHHHHHHHTTCGGGCSEEEEHHHHT
T ss_pred             CCCHHHHHHHHHHHHHh--ccccCcCccHHHHHHHHHHCCCEEEEEcCCcccchhHHHHHHHhCCcHHHhhhheeccccC
Confidence            2211 011111111111  11223589999988876   47789999999   888899999999999999999987766


Q ss_pred             CCCCCCCCCChhhHHHHHhhhcccCCCCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEE
Q 022360          150 PTHKNTVSDDEDDIAFVESAASTTTSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFF  229 (298)
Q Consensus       150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~p~~~i~i  229 (298)
                      .                                                      .||+|.++..+++++|++|++|++|
T Consensus       156 ~------------------------------------------------------~kp~~~~~~~~~~~lgi~~~~~~~i  181 (235)
T 2om6_A          156 S------------------------------------------------------YKPRKEMFEKVLNSFEVKPEESLHI  181 (235)
T ss_dssp             C------------------------------------------------------CTTCHHHHHHHHHHTTCCGGGEEEE
T ss_pred             C------------------------------------------------------CCCCHHHHHHHHHHcCCCccceEEE
Confidence            4                                                      7999999999999999999999999


Q ss_pred             cCCc-cchHHHHHcCCeEEEecCCCC----CCCCCEEeCCHHHHHHHhHHhh
Q 022360          230 EDSV-RNIQAGKRVGLDTVLIGKSQR----VKGADYAFESIHNIKEAIPELW  276 (298)
Q Consensus       230 GDs~-~Di~~a~~aG~~~v~v~~~~~----~~~ad~i~~s~~~l~~~l~~~~  276 (298)
                      ||+. ||++||+.+|+.++++.++..    ...++++++++.+|.++|.++.
T Consensus       182 GD~~~nDi~~a~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~~l~~~~  233 (235)
T 2om6_A          182 GDTYAEDYQGARKVGMWAVWINQEGDKVRKLEERGFEIPSIANLKDVIELIS  233 (235)
T ss_dssp             ESCTTTTHHHHHHTTSEEEEECTTCCSCEEEETTEEEESSGGGHHHHHHHTC
T ss_pred             CCChHHHHHHHHHCCCEEEEECCCCCCcccCCCCcchHhhHHHHHHHHHHHh
Confidence            9999 999999999999999977642    3458899999999999887663

>3m9l_A Hydrolase, haloacid dehalogenase-like family; HAD family hydrolase, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Pseudomonas fluorescens} PDB: 2ybd_A* 3r09_A*

Probab=99.92  E-value=3.8e-25  Score=188.83  Aligned_cols=191  Identities=21%  Similarity=0.273  Sum_probs=139.3

Q ss_pred             ccccCccEEEEeCCCCccCCCccHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHhCCCHHHHHHccCCCChhhHHHH
Q 022360            9 MAAAKYDCLLFDLDDTLYPYSSGIAAACGQNIKDYMVEKLGIERSKIEDLGNLLYKNYGTTMAGLRAIGYDFDYDDYHSF   88 (298)
Q Consensus         9 ~~~~~~k~viFDlDGTL~d~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~   88 (298)
                      |.++++|+|+||+||||+++...+..         +.+..|+.....  ....+ .  +........      ...+...
T Consensus         1 M~~~~~k~iifDlDGTL~d~~~~~~~---------~~~~~g~~~~~~--~~~~~-~--~~~~~~~~~------~~~~~~~   60 (205)
T 3m9l_A            1 MSLSEIKHWVFDMDGTLTIAVHDFAA---------IREALSIPAEDD--ILTHL-A--ALPADESAA------KHAWLLE   60 (205)
T ss_dssp             CCGGGCCEEEECTBTTTEEEEECHHH---------HHHHTTCCTTSC--HHHHH-H--HSCHHHHHH------HHHHHHH
T ss_pred             CCcccCCEEEEeCCCcCcccHHHHHH---------HHHHhCCCchHH--HHHHH-h--cCChHHHHH------HHHHHHH
Confidence            45567899999999999997666542         345566654321  11111 1  111110000      0111111


Q ss_pred             hhcccCCCCCCCChhHHHHHHhCC---CcEEEEeCCChHHHHHHHHHhCCCCcc--ceeEeecCCCCCCCCCCCCChhhH
Q 022360           89 VHGRLPYENLKPDPVLRSLLLSLP---LRKIIFTNADKVHAVKVLSRLGLEDCF--EGIICFETLNPTHKNTVSDDEDDI  163 (298)
Q Consensus        89 ~~~~~~~~~~~~~~g~~~~L~~l~---~~~~ivS~~~~~~~~~~l~~l~l~~~f--~~i~~~~~~~~~~~~~~~~~~~~~  163 (298)
                      .... ......++|++.++|+.++   ++++++|++....++..++.+++..+|  +.+++.+. +.             
T Consensus        61 ~~~~-~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~~i~~~~~-~~-------------  125 (205)
T 3m9l_A           61 HERD-LAQGSRPAPGAVELVRELAGRGYRLGILTRNARELAHVTLEAIGLADCFAEADVLGRDE-AP-------------  125 (205)
T ss_dssp             THHH-HEEEEEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGSCGGGEECTTT-SC-------------
T ss_pred             HHHH-HhhcCCCCccHHHHHHHHHhcCCeEEEEeCCchHHHHHHHHHcCchhhcCcceEEeCCC-CC-------------
Confidence            1111 1134567899999888774   789999999999999999999999999  77776554 32             


Q ss_pred             HHHHhhhcccCCCCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHHcC
Q 022360          164 AFVESAASTTTSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVG  243 (298)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a~~aG  243 (298)
                                                               +||++.+++.+++++|++|++|++|||+.||++||+.+|
T Consensus       126 -----------------------------------------~kp~~~~~~~~~~~~g~~~~~~i~iGD~~~Di~~a~~aG  164 (205)
T 3m9l_A          126 -----------------------------------------PKPHPGGLLKLAEAWDVSPSRMVMVGDYRFDLDCGRAAG  164 (205)
T ss_dssp             -----------------------------------------CTTSSHHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHT
T ss_pred             -----------------------------------------CCCCHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHcC
Confidence                                                     799999999999999999999999999999999999999


Q ss_pred             CeEEEecCCCC--CCCCCEEeCCHHHHHHHhHHh
Q 022360          244 LDTVLIGKSQR--VKGADYAFESIHNIKEAIPEL  275 (298)
Q Consensus       244 ~~~v~v~~~~~--~~~ad~i~~s~~~l~~~l~~~  275 (298)
                      +.++++.++..  +..||++++|+.+|.+.++.-
T Consensus       165 ~~~i~v~~~~~~~~~~ad~v~~~~~el~~~~~~~  198 (205)
T 3m9l_A          165 TRTVLVNLPDNPWPELTDWHARDCAQLRDLLSAE  198 (205)
T ss_dssp             CEEEECSSSSCSCGGGCSEECSSHHHHHHHHHHT
T ss_pred             CEEEEEeCCCCcccccCCEEeCCHHHHHHHHHhc
Confidence            99999977653  566999999999999888754

>3sd7_A Putative phosphatase; structural genomics, haloacid dehalogenase-like hydrolase, H center for structural genomics of infectious diseases; HET: PGE; 1.70A {Clostridium difficile}

Probab=99.92  E-value=1.1e-24  Score=190.06  Aligned_cols=195  Identities=19%  Similarity=0.276  Sum_probs=145.4

Q ss_pred             CccEEEEeCCCCccCCCccHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHhCCCHHHHHHccCCCChhh-------H
Q 022360           13 KYDCLLFDLDDTLYPYSSGIAAACGQNIKDYMVEKLGIERSKIEDLGNLLYKNYGTTMAGLRAIGYDFDYDD-------Y   85 (298)
Q Consensus        13 ~~k~viFDlDGTL~d~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~-------~   85 (298)
                      ++|+|+||+||||+++...+..++...     .+..|......     .+....|.............+...       +
T Consensus        28 mik~iifDlDGTL~d~~~~~~~~~~~~-----~~~~g~~~~~~-----~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~   97 (240)
T 3sd7_A           28 NYEIVLFDLDGTLTDPKEGITKSIQYS-----LNSFGIKEDLE-----NLDQFIGPPLHDTFKEYYKFEDKKAKEAVEKY   97 (240)
T ss_dssp             CCSEEEECSBTTTEECHHHHHHHHHHH-----HHHTTCCCCGG-----GGGGGSSSCHHHHHHHTSCCCHHHHHHHHHHH
T ss_pred             hccEEEEecCCcCccCHHHHHHHHHHH-----HHHcCCCCCHH-----HHHHHhCccHHHHHHHHhCCCHHHHHHHHHHH
Confidence            479999999999999877777777653     33455542110     011122333222211111222222       2


Q ss_pred             HHHhhcccCCCCCCCChhHHHHHHhCC---CcEEEEeCCChHHHHHHHHHhCCCCccceeEeecCCCCCCCCCCCCChhh
Q 022360           86 HSFVHGRLPYENLKPDPVLRSLLLSLP---LRKIIFTNADKVHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSDDEDD  162 (298)
Q Consensus        86 ~~~~~~~~~~~~~~~~~g~~~~L~~l~---~~~~ivS~~~~~~~~~~l~~l~l~~~f~~i~~~~~~~~~~~~~~~~~~~~  162 (298)
                      ...+... ......++||+.++|+.++   ++++++|++....++..++.+++..+|+.++++++.+.            
T Consensus        98 ~~~~~~~-~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~------------  164 (240)
T 3sd7_A           98 REYFADK-GIFENKIYENMKEILEMLYKNGKILLVATSKPTVFAETILRYFDIDRYFKYIAGSNLDGT------------  164 (240)
T ss_dssp             HHHHHHT-GGGCCEECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCGGGCSEEEEECTTSC------------
T ss_pred             HHHHHHh-cccccccCccHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHcCcHhhEEEEEeccccCC------------
Confidence            2222221 1234678899999988874   78999999999999999999999999999999987765            


Q ss_pred             HHHHHhhhcccCCCCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCC-CCcEEEEcCCccchHHHHH
Q 022360          163 IAFVESAASTTTSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASIN-PQRTLFFEDSVRNIQAGKR  241 (298)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~-p~~~i~iGDs~~Di~~a~~  241 (298)
                                                                +||++.++..+++++|++ |++|++|||+.||+++|+.
T Consensus       165 ------------------------------------------~kp~~~~~~~~~~~~g~~~~~~~i~vGD~~~Di~~a~~  202 (240)
T 3sd7_A          165 ------------------------------------------RVNKNEVIQYVLDLCNVKDKDKVIMVGDRKYDIIGAKK  202 (240)
T ss_dssp             ------------------------------------------CCCHHHHHHHHHHHHTCCCGGGEEEEESSHHHHHHHHH
T ss_pred             ------------------------------------------CCCCHHHHHHHHHHcCCCCCCcEEEECCCHHHHHHHHH
Confidence                                                      799999999999999999 9999999999999999999


Q ss_pred             cCCeEEEecCCCC------CCCCCEEeCCHHHHHHHh
Q 022360          242 VGLDTVLIGKSQR------VKGADYAFESIHNIKEAI  272 (298)
Q Consensus       242 aG~~~v~v~~~~~------~~~ad~i~~s~~~l~~~l  272 (298)
                      +|+.++++.++..      +..+++++.++.+|.++|
T Consensus       203 aG~~~i~v~~g~~~~~~~~~~~ad~v~~~~~el~~~l  239 (240)
T 3sd7_A          203 IGIDSIGVLYGYGSFEEISESEPTYIVENVESIKDIL  239 (240)
T ss_dssp             HTCEEEEESSSSCCHHHHHHHCCSEEESSSTTHHHHH
T ss_pred             CCCCEEEEeCCCCCHHHHhhcCCCEEECCHHHHHHHh
Confidence            9999999987653      378999999999998865

>1zrn_A L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseudomonas SP} SCOP: c.108.1.1 PDB: 1zrm_A 1jud_A 1qh9_A

Probab=99.92  E-value=1.1e-23  Score=182.32  Aligned_cols=126  Identities=20%  Similarity=0.300  Sum_probs=109.6

Q ss_pred             CCCCChhHHHHHHhC---CCcEEEEeCCChHHHHHHHHHhCCCCccceeEeecCCCCCCCCCCCCChhhHHHHHhhhccc
Q 022360           97 NLKPDPVLRSLLLSL---PLRKIIFTNADKVHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSDDEDDIAFVESAASTT  173 (298)
Q Consensus        97 ~~~~~~g~~~~L~~l---~~~~~ivS~~~~~~~~~~l~~l~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  173 (298)
                      ...++|++.++|+.|   +++++++|++....++..++.+++..+|+.++++++.+.                       
T Consensus        93 ~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~-----------------------  149 (232)
T 1zrn_A           93 RLAPFSEVPDSLRELKRRGLKLAILSNGSPQSIDAVVSHAGLRDGFDHLLSVDPVQV-----------------------  149 (232)
T ss_dssp             GCEECTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCSEEEESGGGTC-----------------------
T ss_pred             cCCCCccHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHhcChHhhhheEEEecccCC-----------------------
Confidence            467889999998877   478999999999999999999999999999999887664                       


Q ss_pred             CCCCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHHcCCeEEEecCCC
Q 022360          174 TSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTVLIGKSQ  253 (298)
Q Consensus       174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a~~aG~~~v~v~~~~  253 (298)
                                                     +||+|.++..+++++|++|++|++|||+.+|+.+|+++|+.++++.++.
T Consensus       150 -------------------------------~Kp~~~~~~~~~~~~~~~~~~~~~iGD~~~Di~~a~~aG~~~~~~~~~~  198 (232)
T 1zrn_A          150 -------------------------------YKPDNRVYELAEQALGLDRSAILFVASNAWDATGARYFGFPTCWINRTG  198 (232)
T ss_dssp             -------------------------------CTTSHHHHHHHHHHHTSCGGGEEEEESCHHHHHHHHHHTCCEEEECTTC
T ss_pred             -------------------------------CCCCHHHHHHHHHHcCCCcccEEEEeCCHHHHHHHHHcCCEEEEEcCCC
Confidence                                           7999999999999999999999999999999999999999999997653


Q ss_pred             C-----CCCCCEEeCCHHHHHHHhHHhh
Q 022360          254 R-----VKGADYAFESIHNIKEAIPELW  276 (298)
Q Consensus       254 ~-----~~~ad~i~~s~~~l~~~l~~~~  276 (298)
                      .     ...+++++.++.+|.+.|.+..
T Consensus       199 ~~~~~~~~~~~~~~~~~~el~~~l~~~~  226 (232)
T 1zrn_A          199 NVFEEMGQTPDWEVTSLRAVVELFETAA  226 (232)
T ss_dssp             CCCCSSSCCCSEEESSHHHHHTTC----
T ss_pred             CCccccCCCCCEEECCHHHHHHHHHhhc
Confidence            2     4678999999999988876654

>3l5k_A Protein GS1, haloacid dehalogenase-like hydrolase domain- containing protein 1A; HDHD1A, haloacid dehalogenase-like hydrolase domain containing 1A; 2.00A {Homo sapiens}

Probab=99.91  E-value=3.5e-25  Score=194.48  Aligned_cols=200  Identities=16%  Similarity=0.163  Sum_probs=145.8

Q ss_pred             cCccEEEEeCCCCccCCCccHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHhCCCHHHH-----HHccCCCChhhHH
Q 022360           12 AKYDCLLFDLDDTLYPYSSGIAAACGQNIKDYMVEKLGIERSKIEDLGNLLYKNYGTTMAGL-----RAIGYDFDYDDYH   86 (298)
Q Consensus        12 ~~~k~viFDlDGTL~d~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~-----~~~~~~~~~~~~~   86 (298)
                      +++|+|+||+||||+++...+..++...     .+..|+......     .....|......     ...+...+...+.
T Consensus        28 ~~ik~i~fDlDGTL~d~~~~~~~~~~~~-----~~~~g~~~~~~~-----~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~   97 (250)
T 3l5k_A           28 QPVTHLIFDMDGLLLDTERLYSVVFQEI-----CNRYDKKYSWDV-----KSLVMGKKALEAAQIIIDVLQLPMSKEELV   97 (250)
T ss_dssp             CCCSEEEEETBTTTBCHHHHHHHHHHHH-----HHHTTCCCCHHH-----HHHHTTCCHHHHHHHHHHHHTCSSCHHHHH
T ss_pred             cCCcEEEEcCCCCcCCCHHHHHHHHHHH-----HHHhCCCCCHHH-----HHHhcCCCHHHHHHHHHHHhCCCCCHHHHH
Confidence            5689999999999999777777666653     344565533211     122223332211     2233344444333


Q ss_pred             HHhhccc--CCCCCCCChhHHHHHHhCC---CcEEEEeCCChHHHHHHHHH-hCCCCccceeEeec--CCCCCCCCCCCC
Q 022360           87 SFVHGRL--PYENLKPDPVLRSLLLSLP---LRKIIFTNADKVHAVKVLSR-LGLEDCFEGIICFE--TLNPTHKNTVSD  158 (298)
Q Consensus        87 ~~~~~~~--~~~~~~~~~g~~~~L~~l~---~~~~ivS~~~~~~~~~~l~~-l~l~~~f~~i~~~~--~~~~~~~~~~~~  158 (298)
                      ..+....  ......++||+.++|+.|+   ++++++|++....+...+.. +++..+|+.+++++  +.+.        
T Consensus        98 ~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~sn~~~~~~~~~l~~~~~l~~~f~~~~~~~~~~~~~--------  169 (250)
T 3l5k_A           98 EESQTKLKEVFPTAALMPGAEKLIIHLRKHGIPFALATSSRSASFDMKTSRHKEFFSLFSHIVLGDDPEVQH--------  169 (250)
T ss_dssp             HHHHHHHHHHGGGCCBCTTHHHHHHHHHHTTCCEEEECSCCHHHHHHHTTTCHHHHTTSSCEECTTCTTCCS--------
T ss_pred             HHHHHHHHHHhccCCCCCCHHHHHHHHHhCCCcEEEEeCCCHHHHHHHHHhccCHHhheeeEEecchhhccC--------
Confidence            3221110  1235678999999988774   78999999998877776644 68889999999887  6554        


Q ss_pred             ChhhHHHHHhhhcccCCCCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCCC--CcEEEEcCCccch
Q 022360          159 DEDDIAFVESAASTTTSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINP--QRTLFFEDSVRNI  236 (298)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~p--~~~i~iGDs~~Di  236 (298)
                                                                    +||+|.+++.+++++|++|  ++|++|||+.||+
T Consensus       170 ----------------------------------------------~Kp~~~~~~~~~~~lgi~~~~~~~i~iGD~~~Di  203 (250)
T 3l5k_A          170 ----------------------------------------------GKPDPDIFLACAKRFSPPPAMEKCLVFEDAPNGV  203 (250)
T ss_dssp             ----------------------------------------------CTTSTHHHHHHHHTSSSCCCGGGEEEEESSHHHH
T ss_pred             ----------------------------------------------CCCChHHHHHHHHHcCCCCCcceEEEEeCCHHHH
Confidence                                                          7999999999999999998  9999999999999


Q ss_pred             HHHHHcCCeEEEecCCC----CCCCCCEEeCCHHHHHHHhHHh
Q 022360          237 QAGKRVGLDTVLIGKSQ----RVKGADYAFESIHNIKEAIPEL  275 (298)
Q Consensus       237 ~~a~~aG~~~v~v~~~~----~~~~ad~i~~s~~~l~~~l~~~  275 (298)
                      +||+++|+.++++.++.    .+..|+++++++.+|...|..+
T Consensus       204 ~~a~~aG~~~i~v~~~~~~~~~~~~ad~v~~sl~el~~~l~~l  246 (250)
T 3l5k_A          204 EAALAAGMQVVMVPDGNLSRDLTTKATLVLNSLQDFQPELFGL  246 (250)
T ss_dssp             HHHHHTTCEEEECCCTTSCGGGSTTSSEECSCGGGCCGGGGTC
T ss_pred             HHHHHcCCEEEEEcCCCCchhhcccccEeecCHHHhhHHHhcC
Confidence            99999999999997765    3678999999999987776554

>2nyv_A Pgpase, PGP, phosphoglycolate phosphatase; structural genomics, PSI-2, protein structure initiative; 2.10A {Aquifex aeolicus} PDB: 2yy6_A

Probab=99.91  E-value=4.9e-25  Score=191.22  Aligned_cols=199  Identities=24%  Similarity=0.318  Sum_probs=144.8

Q ss_pred             CccEEEEeCCCCccCCCccHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHhCCCHHHHHH-c-c-CCCC--hhhHHH
Q 022360           13 KYDCLLFDLDDTLYPYSSGIAAACGQNIKDYMVEKLGIERSKIEDLGNLLYKNYGTTMAGLRA-I-G-YDFD--YDDYHS   87 (298)
Q Consensus        13 ~~k~viFDlDGTL~d~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~-~-~-~~~~--~~~~~~   87 (298)
                      ++|+|+||+||||+++...+..++...+     +..|.+......    +....|........ . + ....  ...+..
T Consensus         2 ~~k~viFDlDGTL~d~~~~~~~~~~~~~-----~~~g~~~~~~~~----~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~   72 (222)
T 2nyv_A            2 SLRVILFDLDGTLIDSAKDIALALEKTL-----KELGLEEYYPDN----VTKYIGGGVRALLEKVLKDKFREEYVEVFRK   72 (222)
T ss_dssp             EECEEEECTBTTTEECHHHHHHHHHHHH-----HHTTCGGGCCSC----GGGGCSSCHHHHHHHHHGGGCCTHHHHHHHH
T ss_pred             CCCEEEECCCCcCCCCHHHHHHHHHHHH-----HHcCCCCCCHHH----HHHHhCcCHHHHHHHHhChHHHHHHHHHHHH
Confidence            4789999999999998777777766533     344543111000    01112322222111 0 1 0111  122222


Q ss_pred             HhhcccCCCCCCCChhHHHHHHhC---CCcEEEEeCCChHHHHHHHHHhCCCCccceeEeecCCCCCCCCCCCCChhhHH
Q 022360           88 FVHGRLPYENLKPDPVLRSLLLSL---PLRKIIFTNADKVHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSDDEDDIA  164 (298)
Q Consensus        88 ~~~~~~~~~~~~~~~g~~~~L~~l---~~~~~ivS~~~~~~~~~~l~~l~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~  164 (298)
                      .+... ......++||+.++|+.|   +++++++|++....++..++++++..+|+.++++++.+.              
T Consensus        73 ~~~~~-~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~--------------  137 (222)
T 2nyv_A           73 HYLEN-PVVYTKPYPEIPYTLEALKSKGFKLAVVSNKLEELSKKILDILNLSGYFDLIVGGDTFGE--------------  137 (222)
T ss_dssp             HHHHC-SCSSCEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGCSEEECTTSSCT--------------
T ss_pred             HHHHh-ccccCccCCCHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCHHHheEEEecCcCCC--------------
Confidence            22221 124567899999999887   478999999999999999999999999999998887654              


Q ss_pred             HHHhhhcccCCCCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHHcCC
Q 022360          165 FVESAASTTTSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGL  244 (298)
Q Consensus       165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a~~aG~  244 (298)
                                                              +||+|..+..+++++|++|++|++|||+.+|+.+|+++|+
T Consensus       138 ----------------------------------------~Kp~~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~aG~  177 (222)
T 2nyv_A          138 ----------------------------------------KKPSPTPVLKTLEILGEEPEKALIVGDTDADIEAGKRAGT  177 (222)
T ss_dssp             ----------------------------------------TCCTTHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHHTC
T ss_pred             ----------------------------------------CCCChHHHHHHHHHhCCCchhEEEECCCHHHHHHHHHCCC
Confidence                                                    7999999999999999999999999999999999999999


Q ss_pred             eEEEecCCCC---CCCCCEEeCCHHHHHHHhHHh
Q 022360          245 DTVLIGKSQR---VKGADYAFESIHNIKEAIPEL  275 (298)
Q Consensus       245 ~~v~v~~~~~---~~~ad~i~~s~~~l~~~l~~~  275 (298)
                      .++++.++..   ...++++++++.+|.++|.+.
T Consensus       178 ~~i~v~~g~~~~~~~~~~~~~~~~~el~~~l~~~  211 (222)
T 2nyv_A          178 KTALALWGYVKLNSQIPDFTLSRPSDLVKLMDNH  211 (222)
T ss_dssp             EEEEETTSSCSCCCCCCSEEESSTTHHHHHHHTT
T ss_pred             eEEEEcCCCCCccccCCCEEECCHHHHHHHHHHh
Confidence            9999977542   267899999999998887654

>1qq5_A Protein (L-2-haloacid dehalogenase); hydrolase; 1.52A {Xanthobacter autotrophicus} SCOP: c.108.1.1 PDB: 1qq6_A* 1qq7_A* 1aq6_A

Probab=99.91  E-value=7.4e-23  Score=180.50  Aligned_cols=128  Identities=17%  Similarity=0.351  Sum_probs=114.4

Q ss_pred             CCCCCChhHHHHHHhC-CCcEEEEeCCChHHHHHHHHHhCCCCccceeEeecCCCCCCCCCCCCChhhHHHHHhhhcccC
Q 022360           96 ENLKPDPVLRSLLLSL-PLRKIIFTNADKVHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSDDEDDIAFVESAASTTT  174 (298)
Q Consensus        96 ~~~~~~~g~~~~L~~l-~~~~~ivS~~~~~~~~~~l~~l~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  174 (298)
                      ....++||+.++|+.+ +++++++|++....++..++++++..+|+.++++++.+.                        
T Consensus        90 ~~~~~~~~~~~~l~~l~g~~~~i~t~~~~~~~~~~l~~~gl~~~f~~~~~~~~~~~------------------------  145 (253)
T 1qq5_A           90 NRLTPYPDAAQCLAELAPLKRAILSNGAPDMLQALVANAGLTDSFDAVISVDAKRV------------------------  145 (253)
T ss_dssp             GSCCBCTTHHHHHHHHTTSEEEEEESSCHHHHHHHHHHTTCGGGCSEEEEGGGGTC------------------------
T ss_pred             hcCCCCccHHHHHHHHcCCCEEEEeCcCHHHHHHHHHHCCchhhccEEEEccccCC------------------------
Confidence            3467899999999988 577899999999999999999999999999999887765                        


Q ss_pred             CCCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHHcCCeEEEecC---
Q 022360          175 SANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTVLIGK---  251 (298)
Q Consensus       175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a~~aG~~~v~v~~---  251 (298)
                                                    +||+|..+..+++++|++|++|++|||+.+|+++|+++|+.++++++   
T Consensus       146 ------------------------------~Kp~~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~aG~~~~~~~~~~~  195 (253)
T 1qq5_A          146 ------------------------------FKPHPDSYALVEEVLGVTPAEVLFVSSNGFDVGGAKNFGFSVARVARLSQ  195 (253)
T ss_dssp             ------------------------------CTTSHHHHHHHHHHHCCCGGGEEEEESCHHHHHHHHHHTCEEEEECCSCH
T ss_pred             ------------------------------CCCCHHHHHHHHHHcCCCHHHEEEEeCChhhHHHHHHCCCEEEEECCccc
Confidence                                          79999999999999999999999999999999999999999999987   


Q ss_pred             --------------------CC-----CCCCCCEEeCCHHHHHHHhHHhhc
Q 022360          252 --------------------SQ-----RVKGADYAFESIHNIKEAIPELWE  277 (298)
Q Consensus       252 --------------------~~-----~~~~ad~i~~s~~~l~~~l~~~~~  277 (298)
                                          +.     .+..++++++|+.+|.++|.++..
T Consensus       196 ~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~~l~~~~~  246 (253)
T 1qq5_A          196 EALARELVSGTIAPLTMFKALRMREETYAEAPDFVVPALGDLPRLVRGMAG  246 (253)
T ss_dssp             HHHHHHTTSSSCCHHHHHHHHHSSCCTTSCCCSEEESSGGGHHHHHHHHC-
T ss_pred             chhhhhcccccccccccccccccccCCCCCCCCeeeCCHHHHHHHHHHhcc
Confidence                                21     246799999999999999987753

>2pke_A Haloacid delahogenase-like family hydrolase; NP_639141.1, ST genomics, joint center for structural genomics, JCSG; 1.81A {Xanthomonas campestris PV}

Probab=99.91  E-value=1.9e-23  Score=183.73  Aligned_cols=203  Identities=13%  Similarity=0.094  Sum_probs=145.2

Q ss_pred             cCccEEEEeCCCCccCCCccHHHHHHHHHHHHHHHHhCCChh--HHHHHH---HHHHHHhCCCHHHHH---------Hcc
Q 022360           12 AKYDCLLFDLDDTLYPYSSGIAAACGQNIKDYMVEKLGIERS--KIEDLG---NLLYKNYGTTMAGLR---------AIG   77 (298)
Q Consensus        12 ~~~k~viFDlDGTL~d~~~~~~~~~~~~~~~~~~~~~g~~~~--~~~~~~---~~~~~~~g~~~~~~~---------~~~   77 (298)
                      |++|+|+|||||||+++...+..++...++.  .+..|+...  ....+.   ...+...|.....+.         ..+
T Consensus        11 M~~k~iifDlDGTL~d~~~~~~~~~~~~~~~--l~~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~   88 (251)
T 2pke_A           11 QAIQLVGFDGDDTLWKSEDYYRTAEADFEAI--LSGYLDLGDSRMQQHLLAVERRNLKIFGYGAKGMTLSMIETAIELTE   88 (251)
T ss_dssp             CSCCEEEECCBTTTBCCHHHHHHHHHHHHHH--HTTTCCC-----CTTHHHHHHHHHHHHCSSHHHHHHHHHHHHHHHTT
T ss_pred             CceeEEEEeCCCCCccCcHhHHHHHHHHHHH--HHHhCCchhHHHHHHHHHHHhhhhhhccCcchHHHHHHHHHHHHhcC
Confidence            3589999999999999888888877765544  245566541  100000   011123455433221         122


Q ss_pred             CCCChhh---HHHHhhcccCCCCCCCChhHHHHHHhC--CCcEEEEeCCChHHHHHHHHHhCCCCccceeEeecCCCCCC
Q 022360           78 YDFDYDD---YHSFVHGRLPYENLKPDPVLRSLLLSL--PLRKIIFTNADKVHAVKVLSRLGLEDCFEGIICFETLNPTH  152 (298)
Q Consensus        78 ~~~~~~~---~~~~~~~~~~~~~~~~~~g~~~~L~~l--~~~~~ivS~~~~~~~~~~l~~l~l~~~f~~i~~~~~~~~~~  152 (298)
                      .......   +...+.+. ......++|++.++|+.+  +++++++|++....+...++.+++..+|+.+++.       
T Consensus        89 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~l~~~~~~~i~t~~~~~~~~~~l~~~~l~~~f~~i~~~-------  160 (251)
T 2pke_A           89 ARIEARDIQRIVEIGRAT-LQHPVEVIAGVREAVAAIAADYAVVLITKGDLFHQEQKIEQSGLSDLFPRIEVV-------  160 (251)
T ss_dssp             TCCCHHHHHHHHHHHHHH-HTCCCCBCTTHHHHHHHHHTTSEEEEEEESCHHHHHHHHHHHSGGGTCCCEEEE-------
T ss_pred             CCCChHHHHHHHHHHHHH-HhccCCcCccHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCcHHhCceeeee-------
Confidence            2222221   22212211 224567899999999887  4778999999999999999999999999988764       


Q ss_pred             CCCCCCChhhHHHHHhhhcccCCCCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCC
Q 022360          153 KNTVSDDEDDIAFVESAASTTTSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDS  232 (298)
Q Consensus       153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~p~~~i~iGDs  232 (298)
                                                                          +||+|.++..+++++|++|++|++|||+
T Consensus       161 ----------------------------------------------------~kp~~~~~~~~~~~l~~~~~~~i~iGD~  188 (251)
T 2pke_A          161 ----------------------------------------------------SEKDPQTYARVLSEFDLPAERFVMIGNS  188 (251)
T ss_dssp             ----------------------------------------------------SCCSHHHHHHHHHHHTCCGGGEEEEESC
T ss_pred             ----------------------------------------------------CCCCHHHHHHHHHHhCcCchhEEEECCC
Confidence                                                                5999999999999999999999999999


Q ss_pred             c-cchHHHHHcCCeEEEecCCCC----------CCCCCE-EeCCHHHHHHHhHHhh
Q 022360          233 V-RNIQAGKRVGLDTVLIGKSQR----------VKGADY-AFESIHNIKEAIPELW  276 (298)
Q Consensus       233 ~-~Di~~a~~aG~~~v~v~~~~~----------~~~ad~-i~~s~~~l~~~l~~~~  276 (298)
                      . ||+.+|+++|+.++++.++..          ...+++ +++++.+|.++|.++.
T Consensus       189 ~~~Di~~a~~aG~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~~~~el~~~l~~~~  244 (251)
T 2pke_A          189 LRSDVEPVLAIGGWGIYTPYAVTWAHEQDHGVAADEPRLREVPDPSGWPAAVRALD  244 (251)
T ss_dssp             CCCCCHHHHHTTCEEEECCCC-------------CCTTEEECSSGGGHHHHHHHHH
T ss_pred             chhhHHHHHHCCCEEEEECCCCccccccccccccCCCCeeeeCCHHHHHHHHHHhC
Confidence            9 999999999999999966532          246898 9999999999887764

>1swv_A Phosphonoacetaldehyde hydrolase; HAD enzyme superfamily, phosphonotase, metal binding; 2.30A {Bacillus cereus} SCOP: c.108.1.3 PDB: 1sww_A 2iof_A* 2ioh_A 1rql_A 1rqn_A 2iof_K* 1rdf_A 1fez_A

Probab=99.91  E-value=7.1e-24  Score=187.67  Aligned_cols=203  Identities=15%  Similarity=0.163  Sum_probs=142.8

Q ss_pred             ccccCccEEEEeCCCCccCCCc-cHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHhCCCHHHH--------------
Q 022360            9 MAAAKYDCLLFDLDDTLYPYSS-GIAAACGQNIKDYMVEKLGIERSKIEDLGNLLYKNYGTTMAGL--------------   73 (298)
Q Consensus         9 ~~~~~~k~viFDlDGTL~d~~~-~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~--------------   73 (298)
                      |++|++|+|+||+||||+++.. .+..++...+     +..|+......     +....|......              
T Consensus         1 M~~m~ik~i~fDlDGTLld~~~~~~~~~~~~~l-----~~~G~~~~~~~-----~~~~~g~~~~~~~~~~~~~~~~~~~~   70 (267)
T 1swv_A            1 MDRMKIEAVIFAWAGTTVDYGCFAPLEVFMEIF-----HKRGVAITAEE-----ARKPMGLLKIDHVRALTEMPRIASEW   70 (267)
T ss_dssp             ----CCCEEEECSBTTTBSTTCCTTHHHHHHHH-----HTTTCCCCHHH-----HHTTTTSCHHHHHHHHHHSHHHHHHH
T ss_pred             CCCCCceEEEEecCCCEEeCCCccHHHHHHHHH-----HHcCCCCCHHH-----HHHHhccchHHHHHHhcccHHHHHHH
Confidence            3445689999999999999877 6677766533     33565432211     111122221110              


Q ss_pred             -HHccCCCChhhHHHH-------hhcccCCCCCCCChhHHHHHHhC---CCcEEEEeCCChHHHHHHHHHhCCCCcc-ce
Q 022360           74 -RAIGYDFDYDDYHSF-------VHGRLPYENLKPDPVLRSLLLSL---PLRKIIFTNADKVHAVKVLSRLGLEDCF-EG  141 (298)
Q Consensus        74 -~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~g~~~~L~~l---~~~~~ivS~~~~~~~~~~l~~l~l~~~f-~~  141 (298)
                       ...+...+...+...       ... .......++|++.++|+.+   +++++++|+.....+...++.+++..+| +.
T Consensus        71 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~~~~~~~~~  149 (267)
T 1swv_A           71 NRVFRQLPTEADIQEMYEEFEEILFA-ILPRYASPINGVKEVIASLRERGIKIGSTTGYTREMMDIVAKEAALQGYKPDF  149 (267)
T ss_dssp             HHHHSSCCCHHHHHHHHHHHHHHHHH-HGGGGCCBCTTHHHHHHHHHHTTCEEEEBCSSCHHHHHHHHHHHHHTTCCCSC
T ss_pred             HHHhCCCCCHHHHHHHHHHHHHHHHH-hhccccccCccHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHcCCcccChHh
Confidence             112222332222111       111 1123457789999888876   4788999999988899999999888886 88


Q ss_pred             eEeecCCCCCCCCCCCCChhhHHHHHhhhcccCCCCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCC
Q 022360          142 IICFETLNPTHKNTVSDDEDDIAFVESAASTTTSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASI  221 (298)
Q Consensus       142 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i  221 (298)
                      ++++++.+.                                                      +||++.++..+++++|+
T Consensus       150 ~~~~~~~~~------------------------------------------------------~kp~~~~~~~~~~~lgi  175 (267)
T 1swv_A          150 LVTPDDVPA------------------------------------------------------GRPYPWMCYKNAMELGV  175 (267)
T ss_dssp             CBCGGGSSC------------------------------------------------------CTTSSHHHHHHHHHHTC
T ss_pred             eecCCccCC------------------------------------------------------CCCCHHHHHHHHHHhCC
Confidence            887766543                                                      79999999999999999


Q ss_pred             CC-CcEEEEcCCccchHHHHHcCCeEEEecCCCC-----------------------------CCCCCEEeCCHHHHHHH
Q 022360          222 NP-QRTLFFEDSVRNIQAGKRVGLDTVLIGKSQR-----------------------------VKGADYAFESIHNIKEA  271 (298)
Q Consensus       222 ~p-~~~i~iGDs~~Di~~a~~aG~~~v~v~~~~~-----------------------------~~~ad~i~~s~~~l~~~  271 (298)
                      +| ++|++|||+.||++||+.+|+.+++++++..                             ...|+++++++.+|.++
T Consensus       176 ~~~~~~i~iGD~~nDi~~a~~aG~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~v~~~~~el~~~  255 (267)
T 1swv_A          176 YPMNHMIKVGDTVSDMKEGRNAGMWTVGVILGSSELGLTEEEVENMDSVELREKIEVVRNRFVENGAHFTIETMQELESV  255 (267)
T ss_dssp             CSGGGEEEEESSHHHHHHHHHTTSEEEEECTTCTTTCCCHHHHHHSCHHHHHHHHHHHHHHHHHTTCSEEESSGGGHHHH
T ss_pred             CCCcCEEEEeCCHHHHHHHHHCCCEEEEEcCCCCccCccHHHHhhchhhhhhhhhhhHHHHHHhcCCceeccCHHHHHHH
Confidence            99 9999999999999999999999999987654                             24599999999999998


Q ss_pred             hHHhh
Q 022360          272 IPELW  276 (298)
Q Consensus       272 l~~~~  276 (298)
                      |..+.
T Consensus       256 l~~~~  260 (267)
T 1swv_A          256 MEHIE  260 (267)
T ss_dssp             HHHHT
T ss_pred             HHHHh
Confidence            87653

>2go7_A Hydrolase, haloacid dehalogenase-like family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.10A {Streptococcus pneumoniae} SCOP: c.108.1.6

Probab=99.91  E-value=1.5e-24  Score=182.51  Aligned_cols=193  Identities=17%  Similarity=0.230  Sum_probs=140.3

Q ss_pred             CccEEEEeCCCCccCCCccHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHhC-CCHHHH-HHcc--CCCCh---hhH
Q 022360           13 KYDCLLFDLDDTLYPYSSGIAAACGQNIKDYMVEKLGIERSKIEDLGNLLYKNYG-TTMAGL-RAIG--YDFDY---DDY   85 (298)
Q Consensus        13 ~~k~viFDlDGTL~d~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g-~~~~~~-~~~~--~~~~~---~~~   85 (298)
                      ++|+|+||+||||+++...+...+.+.+.     ..|+......     .....| .+.... ..+.  ...+.   ..+
T Consensus         3 ~~k~i~fDlDGTL~~~~~~~~~~~~~~~~-----~~g~~~~~~~-----~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~   72 (207)
T 2go7_A            3 QKTAFIWDLDGTLLDSYEAILSGIEETFA-----QFSIPYDKEK-----VREFIFKYSVQDLLVRVAEDRNLDVEVLNQV   72 (207)
T ss_dssp             -CCEEEECTBTTTEECHHHHHHHHHHHHH-----HHTCCCCHHH-----HHHHHHHSCHHHHHHHHHHHHTCCHHHHHHH
T ss_pred             cccEEEEeCCCcccccHHHHHHHHHHHHH-----HcCCCCCHHH-----HHHHHccccHHHHHHHhhchhhccHHHHHHH
Confidence            47999999999999987777777665443     3455332211     111122 222211 1110  11111   112


Q ss_pred             HHHhhcccCCCCCCCChhHHHHHHhCC---CcEEEEeCCChHHHHHHHHHhCCCCccceeEeecCCCCCCCCCCCCChhh
Q 022360           86 HSFVHGRLPYENLKPDPVLRSLLLSLP---LRKIIFTNADKVHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSDDEDD  162 (298)
Q Consensus        86 ~~~~~~~~~~~~~~~~~g~~~~L~~l~---~~~~ivS~~~~~~~~~~l~~l~l~~~f~~i~~~~~~~~~~~~~~~~~~~~  162 (298)
                      .....+ .......+.|++.++|+.++   .+++++|++...... .++.+++..+|+.++++++.+.            
T Consensus        73 ~~~~~~-~~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~-~~~~~~~~~~f~~~~~~~~~~~------------  138 (207)
T 2go7_A           73 RAQSLA-EKNAQVVLMPGAREVLAWADESGIQQFIYTHKGNNAFT-ILKDLGVESYFTEILTSQSGFV------------  138 (207)
T ss_dssp             HHHHHT-TCGGGCEECTTHHHHHHHHHHTTCEEEEECSSCTHHHH-HHHHHTCGGGEEEEECGGGCCC------------
T ss_pred             HHHHHH-hccccceeCcCHHHHHHHHHHCCCeEEEEeCCchHHHH-HHHHcCchhheeeEEecCcCCC------------
Confidence            222222 22245677899999988774   778999999988888 9999999999999998877654            


Q ss_pred             HHHHHhhhcccCCCCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHHc
Q 022360          163 IAFVESAASTTTSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRV  242 (298)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a~~a  242 (298)
                                                                .||++..+..+++++|++|++|++|||+.||++||+.+
T Consensus       139 ------------------------------------------~Kp~~~~~~~~~~~~~i~~~~~~~iGD~~nDi~~~~~a  176 (207)
T 2go7_A          139 ------------------------------------------RKPSPEAATYLLDKYQLNSDNTYYIGDRTLDVEFAQNS  176 (207)
T ss_dssp             ------------------------------------------CTTSSHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHH
T ss_pred             ------------------------------------------CCCCcHHHHHHHHHhCCCcccEEEECCCHHHHHHHHHC
Confidence                                                      79999999999999999999999999999999999999


Q ss_pred             CCeEEEecCCCCCCCCCEEeCCHHHHHHHhH
Q 022360          243 GLDTVLIGKSQRVKGADYAFESIHNIKEAIP  273 (298)
Q Consensus       243 G~~~v~v~~~~~~~~ad~i~~s~~~l~~~l~  273 (298)
                      |+.++++.++. . .|++++.++.+|.++|.
T Consensus       177 G~~~i~~~~~~-~-~a~~v~~~~~el~~~l~  205 (207)
T 2go7_A          177 GIQSINFLEST-Y-EGNHRIQALADISRIFE  205 (207)
T ss_dssp             TCEEEESSCCS-C-TTEEECSSTTHHHHHTS
T ss_pred             CCeEEEEecCC-C-CCCEEeCCHHHHHHHHh
Confidence            99999998777 4 89999999999988763

>3nas_A Beta-PGM, beta-phosphoglucomutase; PSI, structural genomics, protein structure initiative, NEW research center for structural genomics; 3.00A {Bacillus subtilis}

Probab=99.91  E-value=3.5e-24  Score=185.50  Aligned_cols=191  Identities=20%  Similarity=0.211  Sum_probs=126.3

Q ss_pred             CccEEEEeCCCCccCCCccHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHhCCCHHHH-----HHccC--CCChhhH
Q 022360           13 KYDCLLFDLDDTLYPYSSGIAAACGQNIKDYMVEKLGIERSKIEDLGNLLYKNYGTTMAGL-----RAIGY--DFDYDDY   85 (298)
Q Consensus        13 ~~k~viFDlDGTL~d~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~-----~~~~~--~~~~~~~   85 (298)
                      ++|+|+|||||||+++...+..++...     .+..|+.....     .+....|......     ...+.  ..+.+.+
T Consensus         1 ~ik~i~fDlDGTL~d~~~~~~~~~~~~-----~~~~g~~~~~~-----~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~   70 (233)
T 3nas_A            1 SLKAVIFDLDGVITDTAEYHFLAWKHI-----AEQIDIPFDRD-----MNERLKGISREESLESILIFGGAETKYTNAEK   70 (233)
T ss_dssp             -CCEEEECSBTTTBCHHHHHHHHHHHH-----HHHTTCCCCHH-----HHHHTTTCCHHHHHHHHHHHTTCTTTSCHHHH
T ss_pred             CCcEEEECCCCCcCCCHHHHHHHHHHH-----HHHcCCCCCHH-----HHHHHcCCCHHHHHHHHHHHhCCCCCCCHHHH
Confidence            378999999999999877777776653     34456653321     1122223332211     11222  2332222


Q ss_pred             HH-------Hhhccc-CCCCCCCChhHHHHHHhCC---CcEEEEeCCChHHHHHHHHHhCCCCccceeEeecCCCCCCCC
Q 022360           86 HS-------FVHGRL-PYENLKPDPVLRSLLLSLP---LRKIIFTNADKVHAVKVLSRLGLEDCFEGIICFETLNPTHKN  154 (298)
Q Consensus        86 ~~-------~~~~~~-~~~~~~~~~g~~~~L~~l~---~~~~ivS~~~~~~~~~~l~~l~l~~~f~~i~~~~~~~~~~~~  154 (298)
                      ..       .....+ ......++||+.++|+.|+   .+++++|++..  +...++.+++..+|+.++++++.+.    
T Consensus        71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~--~~~~l~~~gl~~~f~~i~~~~~~~~----  144 (233)
T 3nas_A           71 QELMHRKNRDYQMLISKLTPEDLLPGIGRLLCQLKNENIKIGLASSSRN--APKILRRLAIIDDFHAIVDPTTLAK----  144 (233)
T ss_dssp             HHHHHHHHHHHHHHHHTCCGGGSCTTHHHHHHHHHHTTCEEEECCSCTT--HHHHHHHTTCTTTCSEECCC---------
T ss_pred             HHHHHHHHHHHHHHHhhcCcCCcCcCHHHHHHHHHHCCCcEEEEcCchh--HHHHHHHcCcHhhcCEEeeHhhCCC----
Confidence            21       111111 0122347899999988874   78999999855  7888999999999999998877654    


Q ss_pred             CCCCChhhHHHHHhhhcccCCCCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCcc
Q 022360          155 TVSDDEDDIAFVESAASTTTSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVR  234 (298)
Q Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~  234 (298)
                                                                        +||+|.++..+++++|++|++|++|||+.|
T Consensus       145 --------------------------------------------------~Kp~~~~~~~~~~~lgi~~~~~i~vGDs~~  174 (233)
T 3nas_A          145 --------------------------------------------------GKPDPDIFLTAAAMLDVSPADCAAIEDAEA  174 (233)
T ss_dssp             ------------------------------------------------------CCHHHHHHHHHTSCGGGEEEEECSHH
T ss_pred             --------------------------------------------------CCCChHHHHHHHHHcCCCHHHEEEEeCCHH
Confidence                                                              799999999999999999999999999999


Q ss_pred             chHHHHHcCCeEEEecCCCCCCCCCEEeCCHHHHH
Q 022360          235 NIQAGKRVGLDTVLIGKSQRVKGADYAFESIHNIK  269 (298)
Q Consensus       235 Di~~a~~aG~~~v~v~~~~~~~~ad~i~~s~~~l~  269 (298)
                      |++||+++|+.+++++.......|++++.++.++.
T Consensus       175 Di~~a~~aG~~~~~~~~~~~~~~ad~v~~s~~el~  209 (233)
T 3nas_A          175 GISAIKSAGMFAVGVGQGQPMLGADLVVRQTSDLT  209 (233)
T ss_dssp             HHHHHHHTTCEEEECC-------CSEECSSGGGCC
T ss_pred             HHHHHHHcCCEEEEECCccccccCCEEeCChHhCC
Confidence            99999999999999988776669999999999864

>3k1z_A Haloacid dehalogenase-like hydrolase domain-conta protein 3; HDHD3, haloacid dehalogenase-like hydrolase domain containin structural genomics; 1.55A {Homo sapiens}

Probab=99.91  E-value=7.3e-24  Score=188.58  Aligned_cols=205  Identities=19%  Similarity=0.183  Sum_probs=148.0

Q ss_pred             ccEEEEeCCCCccCCCccHHHHHHHHHHHHHHHHhCCChhHHH--HHH----HHHHHH-------hCCCHHH--------
Q 022360           14 YDCLLFDLDDTLYPYSSGIAAACGQNIKDYMVEKLGIERSKIE--DLG----NLLYKN-------YGTTMAG--------   72 (298)
Q Consensus        14 ~k~viFDlDGTL~d~~~~~~~~~~~~~~~~~~~~~g~~~~~~~--~~~----~~~~~~-------~g~~~~~--------   72 (298)
                      +|+|+||+||||+++...+..++..     +.+..|+......  ...    ...+..       .|.....        
T Consensus         1 ik~iiFDlDGTL~d~~~~~~~~~~~-----~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~   75 (263)
T 3k1z_A            1 MRLLTWDVKDTLLRLRHPLGEAYAT-----KARAHGLEVEPSALEQGFRQAYRAQSHSFPNYGLSHGLTSRQWWLDVVLQ   75 (263)
T ss_dssp             CCEEEECCBTTTEEESSCHHHHHHH-----HHHHTTCCCCHHHHHHHHHHHHHHHHHHSTGGGGGGTCCHHHHHHHHHHH
T ss_pred             CcEEEEcCCCceeCCCCCHHHHHHH-----HHHHhCCCCCHHHHHHHHHHHHHHhhhhccccccccCCCHHHHHHHHHHH
Confidence            4799999999999988777776664     4555676533211  101    111111       1222111        


Q ss_pred             -HHHccCCCChhhHH----HHhhcccCCCCCCCChhHHHHHHhCC---CcEEEEeCCChHHHHHHHHHhCCCCccceeEe
Q 022360           73 -LRAIGYDFDYDDYH----SFVHGRLPYENLKPDPVLRSLLLSLP---LRKIIFTNADKVHAVKVLSRLGLEDCFEGIIC  144 (298)
Q Consensus        73 -~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~g~~~~L~~l~---~~~~ivS~~~~~~~~~~l~~l~l~~~f~~i~~  144 (298)
                       +...+. .+...+.    ..+..........++||+.++|+.|+   ++++|+||.... +...++.+|+..+|+.+++
T Consensus        76 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~tn~~~~-~~~~l~~~gl~~~f~~~~~  153 (263)
T 3k1z_A           76 TFHLAGV-QDAQAVAPIAEQLYKDFSHPCTWQVLDGAEDTLRECRTRGLRLAVISNFDRR-LEGILGGLGLREHFDFVLT  153 (263)
T ss_dssp             HHHHTTC-CCHHHHHHHHHHHHHHTTSGGGEEECTTHHHHHHHHHHTTCEEEEEESCCTT-HHHHHHHTTCGGGCSCEEE
T ss_pred             HHHHcCC-CCHHHHHHHHHHHHHHhcCcccceECcCHHHHHHHHHhCCCcEEEEeCCcHH-HHHHHHhCCcHHhhhEEEe
Confidence             111222 2222221    12222111123578999999998874   789999998764 6889999999999999999


Q ss_pred             ecCCCCCCCCCCCCChhhHHHHHhhhcccCCCCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCCCC
Q 022360          145 FETLNPTHKNTVSDDEDDIAFVESAASTTTSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQ  224 (298)
Q Consensus       145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~p~  224 (298)
                      +++.+.                                                      +||+|.++..+++++|++|+
T Consensus       154 ~~~~~~------------------------------------------------------~Kp~~~~~~~~~~~~g~~~~  179 (263)
T 3k1z_A          154 SEAAGW------------------------------------------------------PKPDPRIFQEALRLAHMEPV  179 (263)
T ss_dssp             HHHHSS------------------------------------------------------CTTSHHHHHHHHHHHTCCGG
T ss_pred             ecccCC------------------------------------------------------CCCCHHHHHHHHHHcCCCHH
Confidence            987765                                                      79999999999999999999


Q ss_pred             cEEEEcCCc-cchHHHHHcCCeEEEecCCCCC-------CCCCEEeCCHHHHHHHhHHhhccC
Q 022360          225 RTLFFEDSV-RNIQAGKRVGLDTVLIGKSQRV-------KGADYAFESIHNIKEAIPELWESD  279 (298)
Q Consensus       225 ~~i~iGDs~-~Di~~a~~aG~~~v~v~~~~~~-------~~ad~i~~s~~~l~~~l~~~~~~~  279 (298)
                      +|++|||+. +|+.+|+++|+.++++.++...       ..|++++.++.+|.++|.++....
T Consensus       180 ~~~~vGD~~~~Di~~a~~aG~~~i~~~~~~~~~~~~~~~~~ad~v~~~l~el~~~l~~~~~~~  242 (263)
T 3k1z_A          180 VAAHVGDNYLCDYQGPRAVGMHSFLVVGPQALDPVVRDSVPKEHILPSLAHLLPALDCLEGSA  242 (263)
T ss_dssp             GEEEEESCHHHHTHHHHTTTCEEEEECCSSCCCHHHHHHSCGGGEESSGGGHHHHHHHHHHC-
T ss_pred             HEEEECCCcHHHHHHHHHCCCEEEEEcCCCCCchhhcccCCCceEeCCHHHHHHHHHHHHhcC
Confidence            999999997 9999999999999999887642       279999999999999999987653

>3vay_A HAD-superfamily hydrolase; rossmann fold, haloacid dehalogenase; 1.98A {Pseudomonas syringae PV}

Probab=99.91  E-value=2.7e-23  Score=179.23  Aligned_cols=120  Identities=20%  Similarity=0.334  Sum_probs=106.3

Q ss_pred             CCCCCChhHHHHHHhCC--CcEEEEeCCChHHHHHHHHHhCCCCccceeEeecCCCCCCCCCCCCChhhHHHHHhhhccc
Q 022360           96 ENLKPDPVLRSLLLSLP--LRKIIFTNADKVHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSDDEDDIAFVESAASTT  173 (298)
Q Consensus        96 ~~~~~~~g~~~~L~~l~--~~~~ivS~~~~~~~~~~l~~l~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  173 (298)
                      ....++|++.++|+.++  .+++++||+...     ++.+++..+|+.++++++.+.                       
T Consensus       102 ~~~~~~~~~~~~l~~l~~~~~~~i~t~~~~~-----l~~~~l~~~f~~~~~~~~~~~-----------------------  153 (230)
T 3vay_A          102 HQVQIFPEVQPTLEILAKTFTLGVITNGNAD-----VRRLGLADYFAFALCAEDLGI-----------------------  153 (230)
T ss_dssp             TCCCBCTTHHHHHHHHHTTSEEEEEESSCCC-----GGGSTTGGGCSEEEEHHHHTC-----------------------
T ss_pred             ccCccCcCHHHHHHHHHhCCeEEEEECCchh-----hhhcCcHHHeeeeEEccccCC-----------------------
Confidence            34678999999998875  678899998765     678899999999999887664                       


Q ss_pred             CCCCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCc-cchHHHHHcCCeEEEecCC
Q 022360          174 TSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSV-RNIQAGKRVGLDTVLIGKS  252 (298)
Q Consensus       174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~p~~~i~iGDs~-~Di~~a~~aG~~~v~v~~~  252 (298)
                                                     +||+|.+++.+++++|++|++|++|||+. ||+.+|+++|+.++++.++
T Consensus       154 -------------------------------~kp~~~~~~~~~~~~~~~~~~~~~vGD~~~~Di~~a~~aG~~~~~v~~~  202 (230)
T 3vay_A          154 -------------------------------GKPDPAPFLEALRRAKVDASAAVHVGDHPSDDIAGAQQAGMRAIWYNPQ  202 (230)
T ss_dssp             -------------------------------CTTSHHHHHHHHHHHTCCGGGEEEEESCTTTTHHHHHHTTCEEEEECTT
T ss_pred             -------------------------------CCcCHHHHHHHHHHhCCCchheEEEeCChHHHHHHHHHCCCEEEEEcCC
Confidence                                           79999999999999999999999999998 9999999999999999776


Q ss_pred             CC----CCCCCEEeCCHHHHHHHhHH
Q 022360          253 QR----VKGADYAFESIHNIKEAIPE  274 (298)
Q Consensus       253 ~~----~~~ad~i~~s~~~l~~~l~~  274 (298)
                      ..    ...++++++++.+|.++|.+
T Consensus       203 ~~~~~~~~~~~~~~~~l~el~~~l~~  228 (230)
T 3vay_A          203 GKAWDADRLPDAEIHNLSQLPEVLAR  228 (230)
T ss_dssp             CCCCCSSSCCSEEESSGGGHHHHHHT
T ss_pred             CCCCcccCCCCeeECCHHHHHHHHHh
Confidence            53    56899999999999998865

>3ddh_A Putative haloacid dehalogenase-like family hydrol; hydrolase, HAD superfamily, ST genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides thetaiotaomicron}

Probab=99.91  E-value=7.3e-23  Score=175.71  Aligned_cols=197  Identities=18%  Similarity=0.168  Sum_probs=138.5

Q ss_pred             ccEEEEeCCCCccCCCccHHHHHHHHHHHHHHHHhCCChhHHHHHHHHH---HHHhCCCHHH---------HHHccCCCC
Q 022360           14 YDCLLFDLDDTLYPYSSGIAAACGQNIKDYMVEKLGIERSKIEDLGNLL---YKNYGTTMAG---------LRAIGYDFD   81 (298)
Q Consensus        14 ~k~viFDlDGTL~d~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~---~~~~g~~~~~---------~~~~~~~~~   81 (298)
                      +|+|+||+||||+++...+..++...+..  ....|........+....   ....+.....         ....+...+
T Consensus         8 ik~i~fDlDGTL~~~~~~~~~~~~~~~~~--l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (234)
T 3ddh_A            8 IKVIAFDADDTLWSNEPFFQEVEKQYTDL--LKPYGTSKEISAALFQTEMNNLQILGYGAKAFTISMVETALQISNGKIA   85 (234)
T ss_dssp             CCEEEECCBTTTBCCHHHHHHHHHHHHHH--TGGGSCHHHHHHHHHHHHHHTHHHHCSSHHHHHHHHHHHHHHHTTTCCC
T ss_pred             ccEEEEeCCCCCccCcchHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHhhhhhhhcCCcchhHHHHHHHHHHHhcCCCC
Confidence            89999999999999887777666644333  233442221111111100   1122322211         112233333


Q ss_pred             hhhHHHH---hhcccCCCCCCCChhHHHHHHhC---C-CcEEEEeCCChHHHHHHHHHhCCCCccceeEeecCCCCCCCC
Q 022360           82 YDDYHSF---VHGRLPYENLKPDPVLRSLLLSL---P-LRKIIFTNADKVHAVKVLSRLGLEDCFEGIICFETLNPTHKN  154 (298)
Q Consensus        82 ~~~~~~~---~~~~~~~~~~~~~~g~~~~L~~l---~-~~~~ivS~~~~~~~~~~l~~l~l~~~f~~i~~~~~~~~~~~~  154 (298)
                      .+.....   ..+. ......++|++.++|+.+   + ++++++|++....+...++.+++.++|+.+++.         
T Consensus        86 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~l~~~g~~~~~i~t~~~~~~~~~~l~~~~~~~~f~~~~~~---------  155 (234)
T 3ddh_A           86 ADIIRQIVDLGKSL-LKMPIELLPGVKETLKTLKETGKYKLVVATKGDLLDQENKLERSGLSPYFDHIEVM---------  155 (234)
T ss_dssp             HHHHHHHHHHHHHH-TTCCCCBCTTHHHHHHHHHHHCCCEEEEEEESCHHHHHHHHHHHTCGGGCSEEEEE---------
T ss_pred             HHHHHHHHHHHHHH-hhccCCcCccHHHHHHHHHhCCCeEEEEEeCCchHHHHHHHHHhCcHhhhheeeec---------
Confidence            3333222   2221 224567899999998887   3 788999999999999999999999999998864         


Q ss_pred             CCCCChhhHHHHHhhhcccCCCCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCc-
Q 022360          155 TVSDDEDDIAFVESAASTTTSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSV-  233 (298)
Q Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~p~~~i~iGDs~-  233 (298)
                                                                        +||++.+++.+++++|++|++|++|||+. 
T Consensus       156 --------------------------------------------------~kpk~~~~~~~~~~lgi~~~~~i~iGD~~~  185 (234)
T 3ddh_A          156 --------------------------------------------------SDKTEKEYLRLLSILQIAPSELLMVGNSFK  185 (234)
T ss_dssp             --------------------------------------------------SCCSHHHHHHHHHHHTCCGGGEEEEESCCC
T ss_pred             --------------------------------------------------CCCCHHHHHHHHHHhCCCcceEEEECCCcH
Confidence                                                              59999999999999999999999999997 


Q ss_pred             cchHHHHHcCCeEEEecCC----CC-----CCCCCEEeCCHHHHHHHh
Q 022360          234 RNIQAGKRVGLDTVLIGKS----QR-----VKGADYAFESIHNIKEAI  272 (298)
Q Consensus       234 ~Di~~a~~aG~~~v~v~~~----~~-----~~~ad~i~~s~~~l~~~l  272 (298)
                      ||+.||+.+|+.++++..+    ..     ...++++++|+.+|.++|
T Consensus       186 ~Di~~a~~aG~~~v~v~~~~~~g~~~~~~~~~~~d~v~~~l~el~~~l  233 (234)
T 3ddh_A          186 SDIQPVLSLGGYGVHIPFEVMWKHEVTETFAHERLKQVKRLDDLLSLL  233 (234)
T ss_dssp             CCCHHHHHHTCEEEECCCCTTCCCC---CCCCTTEEECSSGGGHHHHC
T ss_pred             HHhHHHHHCCCeEEEecCCcccccCCcccccCCCceecccHHHHHHhc
Confidence            9999999999999999433    22     234499999999998865

>2hsz_A Novel predicted phosphatase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: UNL; 1.90A {Haemophilus somnus 129PT} SCOP: c.108.1.6

Probab=99.91  E-value=3.7e-24  Score=188.29  Aligned_cols=200  Identities=17%  Similarity=0.229  Sum_probs=143.0

Q ss_pred             ccccCccEEEEeCCCCccCCCccHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHhCCCHHHH-----HH----ccCC
Q 022360            9 MAAAKYDCLLFDLDDTLYPYSSGIAAACGQNIKDYMVEKLGIERSKIEDLGNLLYKNYGTTMAGL-----RA----IGYD   79 (298)
Q Consensus         9 ~~~~~~k~viFDlDGTL~d~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~-----~~----~~~~   79 (298)
                      ....++|+|+||+||||+++...+..++..     ..+..|.........    ....+......     ..    .+..
T Consensus        18 ~~~~~~k~iiFDlDGTL~d~~~~~~~~~~~-----~~~~~g~~~~~~~~~----~~~~g~~~~~~~~~~~~~~~~~~~~~   88 (243)
T 2hsz_A           18 QGMTQFKLIGFDLDGTLVNSLPDLALSINS-----ALKDVNLPQASENLV----MTWIGNGADVLSQRAVDWACKQAEKE   88 (243)
T ss_dssp             -CCSSCSEEEECSBTTTEECHHHHHHHHHH-----HHHHTTCCCCCHHHH----HHHCSSCHHHHHHHHHHHHHHHHTCC
T ss_pred             cCCccCCEEEEcCCCcCCCCHHHHHHHHHH-----HHHHcCCCCCCHHHH----HHHhCchHHHHHHHHhhhhhcccccc
Confidence            344568999999999999987777766664     344456543221111    11122221111     00    0122


Q ss_pred             CChhh-------HHHHhhcccCCCCCCCChhHHHHHHhCC---CcEEEEeCCChHHHHHHHHHhCCCCccceeEeecCCC
Q 022360           80 FDYDD-------YHSFVHGRLPYENLKPDPVLRSLLLSLP---LRKIIFTNADKVHAVKVLSRLGLEDCFEGIICFETLN  149 (298)
Q Consensus        80 ~~~~~-------~~~~~~~~~~~~~~~~~~g~~~~L~~l~---~~~~ivS~~~~~~~~~~l~~l~l~~~f~~i~~~~~~~  149 (298)
                      .....       +...+... ......++||+.++|+.|+   ++++|+|++....++..++++++..+|+.++++++.+
T Consensus        89 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~gl~~~f~~~~~~~~~~  167 (243)
T 2hsz_A           89 LTEDEFKYFKRQFGFYYGEN-LCNISRLYPNVKETLEALKAQGYILAVVTNKPTKHVQPILTAFGIDHLFSEMLGGQSLP  167 (243)
T ss_dssp             CCHHHHHHHHHHHHHHHHHH-TTSSCEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGCSEEECTTTSS
T ss_pred             CCHHHHHHHHHHHHHHHHHh-ccccCccCCCHHHHHHHHHHCCCEEEEEECCcHHHHHHHHHHcCchheEEEEEecccCC
Confidence            22222       11222211 1244678899999998874   7899999999999999999999999999999887665


Q ss_pred             CCCCCCCCCChhhHHHHHhhhcccCCCCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEE
Q 022360          150 PTHKNTVSDDEDDIAFVESAASTTTSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFF  229 (298)
Q Consensus       150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~p~~~i~i  229 (298)
                      .                                                      .||++.++..+++++|++|++|++|
T Consensus       168 ~------------------------------------------------------~Kp~~~~~~~~~~~~~~~~~~~~~v  193 (243)
T 2hsz_A          168 E------------------------------------------------------IKPHPAPFYYLCGKFGLYPKQILFV  193 (243)
T ss_dssp             S------------------------------------------------------CTTSSHHHHHHHHHHTCCGGGEEEE
T ss_pred             C------------------------------------------------------CCcCHHHHHHHHHHhCcChhhEEEE
Confidence            4                                                      6999999999999999999999999


Q ss_pred             cCCccchHHHHHcCCeEEEecCCC------CCCCCCEEeCCHHHHHHHh
Q 022360          230 EDSVRNIQAGKRVGLDTVLIGKSQ------RVKGADYAFESIHNIKEAI  272 (298)
Q Consensus       230 GDs~~Di~~a~~aG~~~v~v~~~~------~~~~ad~i~~s~~~l~~~l  272 (298)
                      ||+.||+.+|+.+|+.++++.++.      ....+++++.++.+|.++|
T Consensus       194 GD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~ad~vi~~~~el~~~l  242 (243)
T 2hsz_A          194 GDSQNDIFAAHSAGCAVVGLTYGYNYNIPIAQSKPDWIFDDFADILKIT  242 (243)
T ss_dssp             ESSHHHHHHHHHHTCEEEEESSSCSTTCCGGGGCCSEEESSGGGGGGGT
T ss_pred             cCCHHHHHHHHHCCCeEEEEcCCCCchhhhhhCCCCEEECCHHHHHHHh
Confidence            999999999999999999997753      1467899999999987654

>3d6j_A Putative haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides fragilis nctc 9343}

Probab=99.90  E-value=7.9e-24  Score=180.99  Aligned_cols=202  Identities=20%  Similarity=0.193  Sum_probs=138.5

Q ss_pred             cCccEEEEeCCCCccCCCccHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHhCCCHHHHHHccCCC-Chhh------
Q 022360           12 AKYDCLLFDLDDTLYPYSSGIAAACGQNIKDYMVEKLGIERSKIEDLGNLLYKNYGTTMAGLRAIGYDF-DYDD------   84 (298)
Q Consensus        12 ~~~k~viFDlDGTL~d~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~-~~~~------   84 (298)
                      |++|+|+||+||||+++...+...+.+.+     +..|.......    .+....|............. ....      
T Consensus         4 M~~k~v~fDlDGTL~d~~~~~~~~~~~~~-----~~~g~~~~~~~----~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~   74 (225)
T 3d6j_A            4 MKYTVYLFDFDYTLADSSRGIVTCFRSVL-----ERHGYTGITDD----MIKRTIGKTLEESFSILTGITDADQLESFRQ   74 (225)
T ss_dssp             -CCSEEEECCBTTTEECHHHHHHHHHHHH-----HHTTCCCCCHH----HHHTTTTSCHHHHHHHHHCCCCHHHHHHHHH
T ss_pred             CCCCEEEEeCCCCCCCCHHHHHHHHHHHH-----HHhCCCCCCHH----HHHHHhCCcHHHHHHHHcCCCCHHHHHHHHH
Confidence            34899999999999998777777766543     33454322111    11222344333221111111 1111      


Q ss_pred             -HHHHhhcccCCCCCCCChhHHHHHHhCC---CcEEEEeCCChHHHHHHHHHhCCCCccceeEeecCCCCCCCCCCCCCh
Q 022360           85 -YHSFVHGRLPYENLKPDPVLRSLLLSLP---LRKIIFTNADKVHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSDDE  160 (298)
Q Consensus        85 -~~~~~~~~~~~~~~~~~~g~~~~L~~l~---~~~~ivS~~~~~~~~~~l~~l~l~~~f~~i~~~~~~~~~~~~~~~~~~  160 (298)
                       +....... ......+.|++.++|+.++   .+++++|+.....+...++.+++..+|+.++++++.+.          
T Consensus        75 ~~~~~~~~~-~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------  143 (225)
T 3d6j_A           75 EYSKEADIY-MNANTILFPDTLPTLTHLKKQGIRIGIISTKYRFRILSFLRNHMPDDWFDIIIGGEDVTH----------  143 (225)
T ss_dssp             HHHHHHHHH-TGGGCEECTTHHHHHHHHHHHTCEEEEECSSCHHHHHHHHHTSSCTTCCSEEECGGGCSS----------
T ss_pred             HHHHHHHHh-ccccCccCcCHHHHHHHHHHCCCeEEEEECCCHHHHHHHHHHcCchhheeeeeehhhcCC----------
Confidence             11111111 1234567899999988774   77899999999999999999999999999988876554          


Q ss_pred             hhHHHHHhhhcccCCCCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccchHHHH
Q 022360          161 DDIAFVESAASTTTSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGK  240 (298)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a~  240 (298)
                                                                  +||++.++..+++++|++|++|++|||+.||++|++
T Consensus       144 --------------------------------------------~k~~~~~~~~~~~~~~~~~~~~i~iGD~~nDi~~~~  179 (225)
T 3d6j_A          144 --------------------------------------------HKPDPEGLLLAIDRLKACPEEVLYIGDSTVDAGTAA  179 (225)
T ss_dssp             --------------------------------------------CTTSTHHHHHHHHHTTCCGGGEEEEESSHHHHHHHH
T ss_pred             --------------------------------------------CCCChHHHHHHHHHhCCChHHeEEEcCCHHHHHHHH
Confidence                                                        699999999999999999999999999999999999


Q ss_pred             HcCCeEEEecCCCC------CCCCCEEeCCHHHHHHHhHHhhc
Q 022360          241 RVGLDTVLIGKSQR------VKGADYAFESIHNIKEAIPELWE  277 (298)
Q Consensus       241 ~aG~~~v~v~~~~~------~~~ad~i~~s~~~l~~~l~~~~~  277 (298)
                      .+|+.++++.++..      ...|++++.++++|.++|+++.+
T Consensus       180 ~aG~~~~~~~~~~~~~~~l~~~~ad~v~~~~~el~~~l~~~~~  222 (225)
T 3d6j_A          180 AAGVSFTGVTSGMTTAQEFQAYPYDRIISTLGQLISVPEDKSG  222 (225)
T ss_dssp             HHTCEEEEETTSSCCTTGGGGSCCSEEESSGGGGC--------
T ss_pred             HCCCeEEEECCCCCChHHHhhcCCCEEECCHHHHHHhhhhhcC
Confidence            99999999866542      23489999999999998877653

>2hcf_A Hydrolase, haloacid dehalogenase-like family; NP_662590.1, ST genomics, PSI-2, protein structure initiative; 1.80A {Chlorobaculum tepidum} SCOP: c.108.1.6

Probab=99.90  E-value=8.3e-24  Score=182.70  Aligned_cols=202  Identities=15%  Similarity=0.206  Sum_probs=142.4

Q ss_pred             CccEEEEeCCCCccCCCccHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHhCCCHHH-H----HHccCCCC------
Q 022360           13 KYDCLLFDLDDTLYPYSSGIAAACGQNIKDYMVEKLGIERSKIEDLGNLLYKNYGTTMAG-L----RAIGYDFD------   81 (298)
Q Consensus        13 ~~k~viFDlDGTL~d~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~-~----~~~~~~~~------   81 (298)
                      ++|+|+|||||||+++...+..++.+.+.++    .|.....      .+....|..... +    ...+...+      
T Consensus         3 ~~k~iifDlDGTL~d~~~~~~~~~~~~~~~~----~g~~~~~------~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~   72 (234)
T 2hcf_A            3 SRTLVLFDIDGTLLKVESMNRRVLADALIEV----YGTEGST------GSHDFSGKMDGAIIYEVLSNVGLERAEIADKF   72 (234)
T ss_dssp             CCEEEEECCBTTTEEECTHHHHHHHHHHHHH----HSCCCCC---------CCTTCCHHHHHHHHHHTTTCCHHHHHHHH
T ss_pred             cceEEEEcCCCCcccCccchHHHHHHHHHHH----hCCCCcc------chhhhcCCChHHHHHHHHHHcCCCcccchhHH
Confidence            4799999999999998888777777544431    3443221      011122332221 1    11111111      


Q ss_pred             ---hhhHHHHhhcccCCCCCCCChhHHHHHHhCC----CcEEEEeCCChHHHHHHHHHhCCCCccceeEeecCCCCCCCC
Q 022360           82 ---YDDYHSFVHGRLPYENLKPDPVLRSLLLSLP----LRKIIFTNADKVHAVKVLSRLGLEDCFEGIICFETLNPTHKN  154 (298)
Q Consensus        82 ---~~~~~~~~~~~~~~~~~~~~~g~~~~L~~l~----~~~~ivS~~~~~~~~~~l~~l~l~~~f~~i~~~~~~~~~~~~  154 (298)
                         ...+.....+.+......++||+.++|+.++    ++++|+|++....++..++.+++..+|+.++++++...    
T Consensus        73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~----  148 (234)
T 2hcf_A           73 DKAKETYIALFRERARREDITLLEGVRELLDALSSRSDVLLGLLTGNFEASGRHKLKLPGIDHYFPFGAFADDALD----  148 (234)
T ss_dssp             HHHHHHHHHHHHHHCCGGGEEECTTHHHHHHHHHTCTTEEEEEECSSCHHHHHHHHHTTTCSTTCSCEECTTTCSS----
T ss_pred             HHHHHHHHHHHHHHhccCCCCcCCCHHHHHHHHHhCCCceEEEEcCCcHHHHHHHHHHCCchhhcCcceecCCCcC----
Confidence               0112222222111134567899999988763    56889999999999999999999999997776654321    


Q ss_pred             CCCCChhhHHHHHhhhcccCCCCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcC--CCCCcEEEEcCC
Q 022360          155 TVSDDEDDIAFVESAASTTTSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIAS--INPQRTLFFEDS  232 (298)
Q Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~--i~p~~~i~iGDs  232 (298)
                                                                       .+||++.+++.+++++|  ++|++|++|||+
T Consensus       149 -------------------------------------------------~~k~~~~~~~~~~~~lg~~~~~~~~i~iGD~  179 (234)
T 2hcf_A          149 -------------------------------------------------RNELPHIALERARRMTGANYSPSQIVIIGDT  179 (234)
T ss_dssp             -------------------------------------------------GGGHHHHHHHHHHHHHCCCCCGGGEEEEESS
T ss_pred             -------------------------------------------------ccchHHHHHHHHHHHhCCCCCcccEEEECCC
Confidence                                                             14788899999999999  999999999999


Q ss_pred             ccchHHHHHcCCeEEEecCCCC------CCCCCEEeCCHHHHHHHhHHhhc
Q 022360          233 VRNIQAGKRVGLDTVLIGKSQR------VKGADYAFESIHNIKEAIPELWE  277 (298)
Q Consensus       233 ~~Di~~a~~aG~~~v~v~~~~~------~~~ad~i~~s~~~l~~~l~~~~~  277 (298)
                      .||++||+++|+.++++.++..      ...+++++.++.+|.++|+++..
T Consensus       180 ~~Di~~a~~aG~~~i~v~~~~~~~~~~~~~~a~~v~~~~~el~~~l~~~~~  230 (234)
T 2hcf_A          180 EHDIRCARELDARSIAVATGNFTMEELARHKPGTLFKNFAETDEVLASILT  230 (234)
T ss_dssp             HHHHHHHHTTTCEEEEECCSSSCHHHHHTTCCSEEESCSCCHHHHHHHHHC
T ss_pred             HHHHHHHHHCCCcEEEEcCCCCCHHHHHhCCCCEEeCCHHhHHHHHHHHhc
Confidence            9999999999999999987653      23599999999999999988763

>1te2_A Putative phosphatase; structural genomics, phosphates, PSI, protein S initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Escherichia coli} SCOP: c.108.1.6

Probab=99.90  E-value=1.5e-23  Score=179.36  Aligned_cols=194  Identities=18%  Similarity=0.178  Sum_probs=137.4

Q ss_pred             CccEEEEeCCCCccCCCccHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHhCCCHHHH-----HHccCC-CChhhHH
Q 022360           13 KYDCLLFDLDDTLYPYSSGIAAACGQNIKDYMVEKLGIERSKIEDLGNLLYKNYGTTMAGL-----RAIGYD-FDYDDYH   86 (298)
Q Consensus        13 ~~k~viFDlDGTL~d~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~-----~~~~~~-~~~~~~~   86 (298)
                      ++|+|+||+||||+++...+...+...     .+..|........    +....|......     ...+.. .....+.
T Consensus         8 ~~k~i~fDlDGTL~~~~~~~~~~~~~~-----~~~~g~~~~~~~~----~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~   78 (226)
T 1te2_A            8 QILAAIFDMDGLLIDSEPLWDRAELDV-----MASLGVDISRRNE----LPDTLGLRIDMVVDLWYARQPWNGPSRQEVV   78 (226)
T ss_dssp             CCCEEEECCBTTTBCCHHHHHHHHHHH-----HHHTTCCGGGGGG----SCCCTTCCHHHHHHHHHHHSCCSSSCHHHHH
T ss_pred             CCCEEEECCCCCcCcCHHHHHHHHHHH-----HHHcCCCCChHHH----HHHHhCCCHHHHHHHHHHHcCCCccCHHHHH
Confidence            489999999999999877777666653     3344554331000    001112221111     011111 1112111


Q ss_pred             H----HhhcccCCCCCCCChhHHHHHHhC---CCcEEEEeCCChHHHHHHHHHhCCCCccceeEeecCCCCCCCCCCCCC
Q 022360           87 S----FVHGRLPYENLKPDPVLRSLLLSL---PLRKIIFTNADKVHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSDD  159 (298)
Q Consensus        87 ~----~~~~~~~~~~~~~~~g~~~~L~~l---~~~~~ivS~~~~~~~~~~l~~l~l~~~f~~i~~~~~~~~~~~~~~~~~  159 (298)
                      .    ...+. ......++|++.++|+.+   +.+++++|+.....++..++.+++..+|+.++++++.+.         
T Consensus        79 ~~~~~~~~~~-~~~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~---------  148 (226)
T 1te2_A           79 ERVIARAISL-VEETRPLLPGVREAVALCKEQGLLVGLASASPLHMLEKVLTMFDLRDSFDALASAEKLPY---------  148 (226)
T ss_dssp             HHHHHHHHHH-HHHHCCBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCSEEEECTTSSC---------
T ss_pred             HHHHHHHHHH-HhccCCcCccHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHhcCcHhhCcEEEeccccCC---------
Confidence            1    11111 112356788998888776   477899999999989999999999999999998877654         


Q ss_pred             hhhHHHHHhhhcccCCCCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccchHHH
Q 022360          160 EDDIAFVESAASTTTSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAG  239 (298)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a  239 (298)
                                                                   .||++.+++.+++++|+++++|++|||+.||++|+
T Consensus       149 ---------------------------------------------~kp~~~~~~~~~~~~~i~~~~~i~iGD~~nDi~~a  183 (226)
T 1te2_A          149 ---------------------------------------------SKPHPQVYLDCAAKLGVDPLTCVALEDSVNGMIAS  183 (226)
T ss_dssp             ---------------------------------------------CTTSTHHHHHHHHHHTSCGGGEEEEESSHHHHHHH
T ss_pred             ---------------------------------------------CCCChHHHHHHHHHcCCCHHHeEEEeCCHHHHHHH
Confidence                                                         79999999999999999999999999999999999


Q ss_pred             HHcCCeEEEecCCC-----CCCCCCEEeCCHHHHHH
Q 022360          240 KRVGLDTVLIGKSQ-----RVKGADYAFESIHNIKE  270 (298)
Q Consensus       240 ~~aG~~~v~v~~~~-----~~~~ad~i~~s~~~l~~  270 (298)
                      +.+|+.++++.++.     .+..|++++.++.+|.+
T Consensus       184 ~~aG~~~~~~~~~~~~~~~~~~~a~~v~~~~~el~~  219 (226)
T 1te2_A          184 KAARMRSIVVPAPEAQNDPRFVLANVKLSSLTELTA  219 (226)
T ss_dssp             HHTTCEEEECCCTTTTTCGGGGGSSEECSCGGGCCH
T ss_pred             HHcCCEEEEEcCCCCcccccccccCeEECCHHHHhH
Confidence            99999999987654     25679999999998755

>2wf7_A Beta-PGM, beta-phosphoglucomutase; transition state analogue, haloacid dehalogenase superfamily, isomerase, phosphotransferase; HET: G7P; 1.05A {Lactococcus lactis} PDB: 1o03_A* 1z4n_A* 1z4o_A* 1zol_A 2wf5_A* 2wf6_A* 1o08_A* 2wf8_A* 2wf9_A* 2wfa_A 2whe_A 1lvh_A* 3fm9_A

Probab=99.90  E-value=5e-23  Score=176.04  Aligned_cols=197  Identities=16%  Similarity=0.172  Sum_probs=137.4

Q ss_pred             ccEEEEeCCCCccCCCccHHHHHHHHHHHHHHHHhCCC-hhHHHHHHHHHHHHhCCCHHHH-----HHccCCCChhhHHH
Q 022360           14 YDCLLFDLDDTLYPYSSGIAAACGQNIKDYMVEKLGIE-RSKIEDLGNLLYKNYGTTMAGL-----RAIGYDFDYDDYHS   87 (298)
Q Consensus        14 ~k~viFDlDGTL~d~~~~~~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~~g~~~~~~-----~~~~~~~~~~~~~~   87 (298)
                      +|+|+||+||||+++...+..++...+     +..|.. ....     ......|......     ...+...+.+....
T Consensus         2 ~k~i~fDlDGTL~d~~~~~~~~~~~~~-----~~~g~~~~~~~-----~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~   71 (221)
T 2wf7_A            2 FKAVLFDLDGVITDTAEYHFRAWKALA-----EEIGINGVDRQ-----FNEQLKGVSREDSLQKILDLADKKVSAEEFKE   71 (221)
T ss_dssp             CCEEEECCBTTTBTHHHHHHHHHHHHH-----HHTTCCCCSHH-----HHTTTTTCCHHHHHHHHHHHTTCCCCHHHHHH
T ss_pred             CcEEEECCCCcccCChHHHHHHHHHHH-----HHcCCCCCCHH-----HHHHhCCCCHHHHHHHHHHHhCCCCChHHHHH
Confidence            689999999999998777776666533     334554 2211     0111123322111     12222233222111


Q ss_pred             -------HhhcccC-CCCCCCChhHHHHHHhC---CCcEEEEeCCChHHHHHHHHHhCCCCccceeEeecCCCCCCCCCC
Q 022360           88 -------FVHGRLP-YENLKPDPVLRSLLLSL---PLRKIIFTNADKVHAVKVLSRLGLEDCFEGIICFETLNPTHKNTV  156 (298)
Q Consensus        88 -------~~~~~~~-~~~~~~~~g~~~~L~~l---~~~~~ivS~~~~~~~~~~l~~l~l~~~f~~i~~~~~~~~~~~~~~  156 (298)
                             ....... .....++|++.++|+.+   +.+++++|+.  ......++.+++..+|+.++++++.+.      
T Consensus        72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~t~~--~~~~~~l~~~~l~~~f~~~~~~~~~~~------  143 (221)
T 2wf7_A           72 LAKRKNDNYVKMIQDVSPADVYPGILQLLKDLRSNKIKIALASAS--KNGPFLLERMNLTGYFDAIADPAEVAA------  143 (221)
T ss_dssp             HHHHHHHHHHHHGGGCCGGGBCTTHHHHHHHHHHTTCEEEECCCC--TTHHHHHHHTTCGGGCSEECCTTTSSS------
T ss_pred             HHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHCCCeEEEEcCc--HHHHHHHHHcChHHHcceEeccccCCC------
Confidence                   1111111 12356789999888876   4788999988  456778889999999999988877654      


Q ss_pred             CCChhhHHHHHhhhcccCCCCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccch
Q 022360          157 SDDEDDIAFVESAASTTTSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNI  236 (298)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di  236 (298)
                                                                      +||+|.+++.+++++|++|++|++|||+.||+
T Consensus       144 ------------------------------------------------~Kp~~~~~~~~~~~lgi~~~~~i~iGD~~nDi  175 (221)
T 2wf7_A          144 ------------------------------------------------SKPAPDIFIAAAHAVGVAPSESIGLEDSQAGI  175 (221)
T ss_dssp             ------------------------------------------------CTTSSHHHHHHHHHTTCCGGGEEEEESSHHHH
T ss_pred             ------------------------------------------------CCCChHHHHHHHHHcCCChhHeEEEeCCHHHH
Confidence                                                            79999999999999999999999999999999


Q ss_pred             HHHHHcCCeEEEecCCCCCCCCCEEeCCHHHH--HHHhHHhh
Q 022360          237 QAGKRVGLDTVLIGKSQRVKGADYAFESIHNI--KEAIPELW  276 (298)
Q Consensus       237 ~~a~~aG~~~v~v~~~~~~~~ad~i~~s~~~l--~~~l~~~~  276 (298)
                      +||+.+|+.+++++.......|++++.+++++  ..+++.++
T Consensus       176 ~~a~~aG~~~~~~~~~~~~~~a~~v~~~~~el~~~~~~~~~~  217 (221)
T 2wf7_A          176 QAIKDSGALPIGVGRPEDLGDDIVIVPDTSHYTLEFLKEVWL  217 (221)
T ss_dssp             HHHHHHTCEEEEESCHHHHCSSSEEESSGGGCCHHHHHHHHH
T ss_pred             HHHHHCCCEEEEECCHHHhccccchhcCHHhCCHHHHHHHHh
Confidence            99999999999997654434899999999984  55555554

>2zg6_A Putative uncharacterized protein ST2620, probable 2-haloalkanoic; probable 2-haloalkanoic acid dehalogenase, hydrolase, structural genomics; 2.40A {Sulfolobus tokodaii}

Probab=99.89  E-value=2e-23  Score=180.55  Aligned_cols=200  Identities=15%  Similarity=0.155  Sum_probs=133.9

Q ss_pred             CccEEEEeCCCCccCCCccHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHhCCC------------HHH-HHHccCC
Q 022360           13 KYDCLLFDLDDTLYPYSSGIAAACGQNIKDYMVEKLGIERSKIEDLGNLLYKNYGTT------------MAG-LRAIGYD   79 (298)
Q Consensus        13 ~~k~viFDlDGTL~d~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~------------~~~-~~~~~~~   79 (298)
                      ++|+|+||+||||+++...+..++..     ..+..|++.... .....+....|..            ... +...+..
T Consensus         2 ~~k~viFDlDGTL~d~~~~~~~~~~~-----~~~~~g~~~~~~-~~~~~~~~~~g~~~~~~~~~~g~~~~~~~~~~~~~~   75 (220)
T 2zg6_A            2 KYKAVLVDFGNTLVGFKPVFYEKVYQ-----VLKDNGYDLDLR-KVFRAYAKAMGMINYPDEDGLEHVDPKDFLYILGIY   75 (220)
T ss_dssp             CCCEEEECSBTTTEEEEETTHHHHHH-----HHHHTTCCCCHH-HHHHHHHHHGGGCCC-----CCCCCHHHHHHHHTCC
T ss_pred             CceEEEEcCCCceecccccHHHHHHH-----HHHHhCCCCCHH-HHHHHHHHHhhhccCCCccccccccHHHHHHHcCCC
Confidence            57899999999999988777777664     344557654322 1222222222221            222 2333443


Q ss_pred             CChhhHHHHhhcccCCCCCCCChhHHHHHHhCC---CcEEEEeCCChHHHHHHHHHhCCCCccceeEeecCCCCCCCCCC
Q 022360           80 FDYDDYHSFVHGRLPYENLKPDPVLRSLLLSLP---LRKIIFTNADKVHAVKVLSRLGLEDCFEGIICFETLNPTHKNTV  156 (298)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~L~~l~---~~~~ivS~~~~~~~~~~l~~l~l~~~f~~i~~~~~~~~~~~~~~  156 (298)
                      ...+................++||+.++|+.|+   ++++|+||+.. .++..++++|+..+|+.++++++.+.      
T Consensus        76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~Tn~~~-~~~~~l~~~gl~~~f~~~~~~~~~~~------  148 (220)
T 2zg6_A           76 PSERLVKELKEADIRDGEAFLYDDTLEFLEGLKSNGYKLALVSNASP-RVKTLLEKFDLKKYFDALALSYEIKA------  148 (220)
T ss_dssp             CCHHHHHHHHHTTTTCEEEEECTTHHHHHHHHHTTTCEEEECCSCHH-HHHHHHHHHTCGGGCSEEC-------------
T ss_pred             CcHHHHHHHHHHhhcccCceECcCHHHHHHHHHHCCCEEEEEeCCcH-HHHHHHHhcCcHhHeeEEEeccccCC------
Confidence            333333333332111234578999999998874   67999999876 47889999999999999999887764      


Q ss_pred             CCChhhHHHHHhhhcccCCCCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCcc-c
Q 022360          157 SDDEDDIAFVESAASTTTSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVR-N  235 (298)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~-D  235 (298)
                                                                      +||+|.++..+++++|++|   ++|||+.+ |
T Consensus       149 ------------------------------------------------~Kp~~~~~~~~~~~~~~~~---~~vgD~~~~D  177 (220)
T 2zg6_A          149 ------------------------------------------------VKPNPKIFGFALAKVGYPA---VHVGDIYELD  177 (220)
T ss_dssp             ----------------------------------------------------CCHHHHHHHHHCSSE---EEEESSCCCC
T ss_pred             ------------------------------------------------CCCCHHHHHHHHHHcCCCe---EEEcCCchHh
Confidence                                                            7999999999999999988   99999998 9


Q ss_pred             hHHHHHcCCeEEEecCCCCCCCCCEEeCCHHHHHHHhHHhh
Q 022360          236 IQAGKRVGLDTVLIGKSQRVKGADYAFESIHNIKEAIPELW  276 (298)
Q Consensus       236 i~~a~~aG~~~v~v~~~~~~~~ad~i~~s~~~l~~~l~~~~  276 (298)
                      +.+|+++|+.++++.++......+++++++.+|.+.|.++.
T Consensus       178 i~~a~~aG~~~i~v~~~~~~~~~~~~i~~l~el~~~l~~~~  218 (220)
T 2zg6_A          178 YIGAKRSYVDPILLDRYDFYPDVRDRVKNLREALQKIEEMN  218 (220)
T ss_dssp             CCCSSSCSEEEEEBCTTSCCTTCCSCBSSHHHHHHHHHHHC
T ss_pred             HHHHHHCCCeEEEECCCCCCCCcceEECCHHHHHHHHHHhc
Confidence            99999999999999764322222678999999998887654

>2w43_A Hypothetical 2-haloalkanoic acid dehalogenase; hydrolase, metabolic process; HET: MES; 1.66A {Sulfolobus tokodaii} PDB: 2w11_A

Probab=99.89  E-value=2.4e-22  Score=170.81  Aligned_cols=121  Identities=17%  Similarity=0.252  Sum_probs=106.7

Q ss_pred             CCCChhHHHHHHhCC--CcEEEEeCCChHHHHHHHHHhCCCCccceeEeecCCCCCCCCCCCCChhhHHHHHhhhcccCC
Q 022360           98 LKPDPVLRSLLLSLP--LRKIIFTNADKVHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSDDEDDIAFVESAASTTTS  175 (298)
Q Consensus        98 ~~~~~g~~~~L~~l~--~~~~ivS~~~~~~~~~~l~~l~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  175 (298)
                      ..++||+.+ |+.|+  ++++|+|++....++..++++++..+|+.++++++.+.                         
T Consensus        73 ~~~~~~~~~-l~~l~~~~~~~i~t~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~-------------------------  126 (201)
T 2w43_A           73 LKAYEDTKY-LKEISEIAEVYALSNGSINEVKQHLERNGLLRYFKGIFSAESVKE-------------------------  126 (201)
T ss_dssp             CEECGGGGG-HHHHHHHSEEEEEESSCHHHHHHHHHHTTCGGGCSEEEEGGGGTC-------------------------
T ss_pred             cccCCChHH-HHHHHhCCeEEEEeCcCHHHHHHHHHHCCcHHhCcEEEehhhcCC-------------------------
Confidence            567888888 77765  78999999999999999999999999999999887664                         


Q ss_pred             CCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHHcCCeEEEecCCCC-
Q 022360          176 ANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTVLIGKSQR-  254 (298)
Q Consensus       176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a~~aG~~~v~v~~~~~-  254 (298)
                                                   +||+|.++..+++++|  |++|++|||+.+|+++|+++|+.++++.++.. 
T Consensus       127 -----------------------------~Kp~~~~~~~~~~~~~--~~~~~~vGD~~~Di~~a~~aG~~~~~~~~~~~~  175 (201)
T 2w43_A          127 -----------------------------YKPSPKVYKYFLDSIG--AKEAFLVSSNAFDVIGAKNAGMRSIFVNRKNTI  175 (201)
T ss_dssp             -----------------------------CTTCHHHHHHHHHHHT--CSCCEEEESCHHHHHHHHHTTCEEEEECSSSCC
T ss_pred             -----------------------------CCCCHHHHHHHHHhcC--CCcEEEEeCCHHHhHHHHHCCCEEEEECCCCCC
Confidence                                         7999999999999999  99999999999999999999999999977532 


Q ss_pred             ----CCCCCEEeCCHHHHHHHhHHh
Q 022360          255 ----VKGADYAFESIHNIKEAIPEL  275 (298)
Q Consensus       255 ----~~~ad~i~~s~~~l~~~l~~~  275 (298)
                          ...++++++++.+|.++|.++
T Consensus       176 ~~~~~~~~~~~~~~~~el~~~l~~~  200 (201)
T 2w43_A          176 VDPIGGKPDVIVNDFKELYEWILRY  200 (201)
T ss_dssp             CCTTSCCCSEEESSHHHHHHHHHHH
T ss_pred             ccccCCCCCEEECCHHHHHHHHHhc
Confidence                346999999999999887653

>3cnh_A Hydrolase family protein; NP_295428.1, predicted hydrolase of haloacid dehalogenase-LI superfamily; HET: MSE PG4; 1.66A {Deinococcus radiodurans R1}

Probab=99.88  E-value=1e-21  Score=166.41  Aligned_cols=175  Identities=19%  Similarity=0.353  Sum_probs=126.7

Q ss_pred             CccEEEEeCCCCccCCCccHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHh--C-CCHHH-HHHc----cCCCChhh
Q 022360           13 KYDCLLFDLDDTLYPYSSGIAAACGQNIKDYMVEKLGIERSKIEDLGNLLYKNY--G-TTMAG-LRAI----GYDFDYDD   84 (298)
Q Consensus        13 ~~k~viFDlDGTL~d~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~--g-~~~~~-~~~~----~~~~~~~~   84 (298)
                      ++|+|+||+||||+++.. ....+..     ..+..|+............+..+  + ..... +...    +.....+.
T Consensus         3 ~~k~viFDlDGTL~d~~~-~~~~~~~-----~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   76 (200)
T 3cnh_A            3 TIKALFWDIGGVLLTNGW-DREQRAD-----VAQRFGLDTDDFTERHRLAAPELELGRMTLAEYLEQVVFYQPRDFTPED   76 (200)
T ss_dssp             CCCEEEECCBTTTBCCSS-CHHHHHH-----HHHHHTCCHHHHHHHHHHHHHHHHTTSSCHHHHHHHHTTTSCCSSCHHH
T ss_pred             CceEEEEeCCCeeECCCc-chHHHHH-----HHHHcCCCHHHHHHHHHhhchHHHcCCcCHHHHHHHHHHHcCCCCCHHH
Confidence            579999999999999764 3334432     44556776544333332222222  1 12222 1111    11222333


Q ss_pred             HHHHhhcccCCCCCCCChhHHHHHHhCC--CcEEEEeCCChHHHHHHHHHhCCCCccceeEeecCCCCCCCCCCCCChhh
Q 022360           85 YHSFVHGRLPYENLKPDPVLRSLLLSLP--LRKIIFTNADKVHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSDDEDD  162 (298)
Q Consensus        85 ~~~~~~~~~~~~~~~~~~g~~~~L~~l~--~~~~ivS~~~~~~~~~~l~~l~l~~~f~~i~~~~~~~~~~~~~~~~~~~~  162 (298)
                      +.+.+.     ....++|++.++|+.++  .+++++|++....++..++.+++..+|+.++++++.+.            
T Consensus        77 ~~~~~~-----~~~~~~~~~~~~l~~l~~~g~~~i~s~~~~~~~~~~l~~~~~~~~f~~~~~~~~~~~------------  139 (200)
T 3cnh_A           77 FRAVME-----EQSQPRPEVLALARDLGQRYRMYSLNNEGRDLNEYRIRTFGLGEFLLAFFTSSALGV------------  139 (200)
T ss_dssp             HHHHHH-----HTCCBCHHHHHHHHHHTTTSEEEEEECCCHHHHHHHHHHHTGGGTCSCEEEHHHHSC------------
T ss_pred             HHHHHH-----hcCccCccHHHHHHHHHHcCCEEEEeCCcHHHHHHHHHhCCHHHhcceEEeecccCC------------
Confidence            433322     23458999999998874  27899999999999999999999999999998876654            


Q ss_pred             HHHHHhhhcccCCCCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHHc
Q 022360          163 IAFVESAASTTTSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRV  242 (298)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a~~a  242 (298)
                                                                +||+|+.+..+++++|++|++|++|||+.+|+++|+++
T Consensus       140 ------------------------------------------~Kp~~~~~~~~~~~~~~~~~~~~~vgD~~~Di~~a~~a  177 (200)
T 3cnh_A          140 ------------------------------------------MKPNPAMYRLGLTLAQVRPEEAVMVDDRLQNVQAARAV  177 (200)
T ss_dssp             ------------------------------------------CTTCHHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHHT
T ss_pred             ------------------------------------------CCCCHHHHHHHHHHcCCCHHHeEEeCCCHHHHHHHHHC
Confidence                                                      79999999999999999999999999999999999999


Q ss_pred             CCeEEEecCC
Q 022360          243 GLDTVLIGKS  252 (298)
Q Consensus       243 G~~~v~v~~~  252 (298)
                      |+.++++.++
T Consensus       178 G~~~~~~~~~  187 (200)
T 3cnh_A          178 GMHAVQCVDA  187 (200)
T ss_dssp             TCEEEECSCH
T ss_pred             CCEEEEECCc
Confidence            9999987654

>4dcc_A Putative haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 1.65A {Bacteroides thetaiotaomicron} PDB: 4dfd_A 4f71_A 4f72_A

Probab=99.87  E-value=2.7e-21  Score=167.78  Aligned_cols=178  Identities=20%  Similarity=0.248  Sum_probs=126.6

Q ss_pred             ccCccEEEEeCCCCccCCCccHHHHHHHHHHHHHHHHhCCChhHHHH---HHHHHHHHh--CC-CHHHH-----HHccCC
Q 022360           11 AAKYDCLLFDLDDTLYPYSSGIAAACGQNIKDYMVEKLGIERSKIED---LGNLLYKNY--GT-TMAGL-----RAIGYD   79 (298)
Q Consensus        11 ~~~~k~viFDlDGTL~d~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~---~~~~~~~~~--g~-~~~~~-----~~~~~~   79 (298)
                      ++++|+|+||+||||+++...   .+..     ..+..|++......   .....+..+  |. +...+     ...+..
T Consensus        25 ~~~ik~viFD~DGTL~d~~~~---~~~~-----~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~   96 (229)
T 4dcc_A           25 SKGIKNLLIDLGGVLINLDRE---RCIE-----NFKKIGFQNIEEKFCTHQLDGIFLQQEKGLITPAEFRDGIREMMGKM   96 (229)
T ss_dssp             -CCCCEEEECSBTTTBCBCHH---HHHH-----HHHHHTCTTHHHHHHHTHHHHHHHHHHTTCSCHHHHHHHHHHHHTSC
T ss_pred             cCCCCEEEEeCCCeEEeCChH---HHHH-----HHHHhCCCcHHHHHHHhcCcHHHHHHHCCCCCHHHHHHHHHHHhCCC
Confidence            345899999999999996532   2221     23345654222110   001122221  21 22111     233555


Q ss_pred             CChhhHHHHhhcccCCCCCCCChhHHHHHHhCC--CcEEEEeCCChHHHHHHH------HHhCCCCccceeEeecCCCCC
Q 022360           80 FDYDDYHSFVHGRLPYENLKPDPVLRSLLLSLP--LRKIIFTNADKVHAVKVL------SRLGLEDCFEGIICFETLNPT  151 (298)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~L~~l~--~~~~ivS~~~~~~~~~~l------~~l~l~~~f~~i~~~~~~~~~  151 (298)
                      .+.+.+...+....    ..+.||+.++|+.|+  ++++|+||+....+...+      +.+++..+|+.++++++.+. 
T Consensus        97 ~~~~~~~~~~~~~~----~~~~~~~~~~l~~l~~~~~~~i~Sn~~~~~~~~~~~~l~~~~~~~l~~~fd~i~~~~~~~~-  171 (229)
T 4dcc_A           97 VSDKQIDAAWNSFL----VDIPTYKLDLLLKLREKYVVYLLSNTNDIHWKWVCKNAFPYRTFKVEDYFEKTYLSYEMKM-  171 (229)
T ss_dssp             CCHHHHHHHHHTTB----CCCCHHHHHHHHHHTTTSEEEEEECCCHHHHHHHHHHTSCBTTBCHHHHCSEEEEHHHHTC-
T ss_pred             CCHHHHHHHHHHHH----HhccHHHHHHHHHHHhcCcEEEEECCChHHHHHHHhhhhhhccCCHHHhCCEEEeecccCC-
Confidence            55666665555422    246799999999886  678999999999888655      66788889999999987765 


Q ss_pred             CCCCCCCChhhHHHHHhhhcccCCCCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcC
Q 022360          152 HKNTVSDDEDDIAFVESAASTTTSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFED  231 (298)
Q Consensus       152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~p~~~i~iGD  231 (298)
                                                                           +||+|.+|+.+++++|++|++|++|||
T Consensus       172 -----------------------------------------------------~KP~~~~~~~~~~~~g~~~~~~~~vGD  198 (229)
T 4dcc_A          172 -----------------------------------------------------AKPEPEIFKAVTEDAGIDPKETFFIDD  198 (229)
T ss_dssp             -----------------------------------------------------CTTCHHHHHHHHHHHTCCGGGEEEECS
T ss_pred             -----------------------------------------------------CCCCHHHHHHHHHHcCCCHHHeEEECC
Confidence                                                                 799999999999999999999999999


Q ss_pred             CccchHHHHHcCCeEEEecCCCC
Q 022360          232 SVRNIQAGKRVGLDTVLIGKSQR  254 (298)
Q Consensus       232 s~~Di~~a~~aG~~~v~v~~~~~  254 (298)
                      +.+|+++|+++|+.+++++++..
T Consensus       199 ~~~Di~~a~~aG~~~i~v~~~~~  221 (229)
T 4dcc_A          199 SEINCKVAQELGISTYTPKAGED  221 (229)
T ss_dssp             CHHHHHHHHHTTCEEECCCTTCC
T ss_pred             CHHHHHHHHHcCCEEEEECCHHH
Confidence            99999999999999999987653

>2qlt_A (DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, saccharom cerevisiae, structural genomics, PSI-2, protein structure initiative; 1.60A {Saccharomyces cerevisiae}

Probab=99.87  E-value=1.3e-21  Score=175.23  Aligned_cols=190  Identities=20%  Similarity=0.155  Sum_probs=134.9

Q ss_pred             CccEEEEeCCCCccCCCccHHHHHHHHHHHHHHHHhC-CChhHHHHHHHHHHHHhCCCHHHH-HHcc-CCCChhhH---H
Q 022360           13 KYDCLLFDLDDTLYPYSSGIAAACGQNIKDYMVEKLG-IERSKIEDLGNLLYKNYGTTMAGL-RAIG-YDFDYDDY---H   86 (298)
Q Consensus        13 ~~k~viFDlDGTL~d~~~~~~~~~~~~~~~~~~~~~g-~~~~~~~~~~~~~~~~~g~~~~~~-~~~~-~~~~~~~~---~   86 (298)
                      ++|+|+||+||||+++...+..++..     ..+..| .....      ......|...... ..+. ........   .
T Consensus        34 ~ik~iifDlDGTLlds~~~~~~~~~~-----~~~~~g~~~~~~------~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~  102 (275)
T 2qlt_A           34 KINAALFDVDGTIIISQPAIAAFWRD-----FGKDKPYFDAEH------VIHISHGWRTYDAIAKFAPDFADEEYVNKLE  102 (275)
T ss_dssp             EESEEEECCBTTTEECHHHHHHHHHH-----HHTTCTTCCHHH------HHHHCTTCCHHHHHHHHCGGGCCHHHHHHHH
T ss_pred             cCCEEEECCCCCCCCCHHHHHHHHHH-----HHHHcCCCCHHH------HHHHhcCCCHHHHHHHHhccCCcHHHHHHHH
Confidence            47999999999999987777666654     334444 22111      1122234443322 1111 01111111   1


Q ss_pred             HHhhcccCCCCCCCChhHHHHHHhC----CCcEEEEeCCChHHHHHHHHHhCCCCccceeEeecCCCCCCCCCCCCChhh
Q 022360           87 SFVHGRLPYENLKPDPVLRSLLLSL----PLRKIIFTNADKVHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSDDEDD  162 (298)
Q Consensus        87 ~~~~~~~~~~~~~~~~g~~~~L~~l----~~~~~ivS~~~~~~~~~~l~~l~l~~~f~~i~~~~~~~~~~~~~~~~~~~~  162 (298)
                      ....+. ......++||+.++|+.+    +++++++|++....+...++.+++. +|+.++++++...            
T Consensus       103 ~~~~~~-~~~~~~~~~g~~~~L~~l~~~~g~~l~i~T~~~~~~~~~~l~~~~l~-~f~~i~~~~~~~~------------  168 (275)
T 2qlt_A          103 GEIPEK-YGEHSIEVPGAVKLCNALNALPKEKWAVATSGTRDMAKKWFDILKIK-RPEYFITANDVKQ------------  168 (275)
T ss_dssp             HTHHHH-HCTTCEECTTHHHHHHHHHTSCGGGEEEECSSCHHHHHHHHHHHTCC-CCSSEECGGGCSS------------
T ss_pred             HHHHHH-HhcCCCcCcCHHHHHHHHHhccCCeEEEEeCCCHHHHHHHHHHcCCC-ccCEEEEcccCCC------------
Confidence            111111 124466789999988876    3568999999999999999999986 4888888776553            


Q ss_pred             HHHHHhhhcccCCCCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCC-------CCCcEEEEcCCccc
Q 022360          163 IAFVESAASTTTSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASI-------NPQRTLFFEDSVRN  235 (298)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i-------~p~~~i~iGDs~~D  235 (298)
                                                                +||+|+++..+++++|+       +|++|++|||+.||
T Consensus       169 ------------------------------------------~kp~~~~~~~~~~~lgi~~~~~~~~~~~~i~~GDs~nD  206 (275)
T 2qlt_A          169 ------------------------------------------GKPHPEPYLKGRNGLGFPINEQDPSKSKVVVFEDAPAG  206 (275)
T ss_dssp             ------------------------------------------CTTSSHHHHHHHHHTTCCCCSSCGGGSCEEEEESSHHH
T ss_pred             ------------------------------------------CCCChHHHHHHHHHcCCCccccCCCcceEEEEeCCHHH
Confidence                                                      79999999999999999       99999999999999


Q ss_pred             hHHHHHcCCeEEEecCCCC-----CCCCCEEeCCHHHHH
Q 022360          236 IQAGKRVGLDTVLIGKSQR-----VKGADYAFESIHNIK  269 (298)
Q Consensus       236 i~~a~~aG~~~v~v~~~~~-----~~~ad~i~~s~~~l~  269 (298)
                      ++||+.+|+.++++.++..     +..|++++.++.+|.
T Consensus       207 i~~a~~AG~~~i~v~~~~~~~~~~~~~ad~v~~~~~el~  245 (275)
T 2qlt_A          207 IAAGKAAGCKIVGIATTFDLDFLKEKGCDIIVKNHESIR  245 (275)
T ss_dssp             HHHHHHTTCEEEEESSSSCHHHHTTSSCSEEESSGGGEE
T ss_pred             HHHHHHcCCEEEEECCCCCHHHHhhCCCCEEECChHHcC
Confidence            9999999999999987653     346999999988763

>3ib6_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.20A {Listeria monocytogenes}

Probab=99.86  E-value=1.6e-21  Score=165.71  Aligned_cols=125  Identities=14%  Similarity=0.275  Sum_probs=109.7

Q ss_pred             CCCCCChhHHHHHHhCC---CcEEEEeCCCh---HHHHHHHHHhCCCCccceeEeecCC----CCCCCCCCCCChhhHHH
Q 022360           96 ENLKPDPVLRSLLLSLP---LRKIIFTNADK---VHAVKVLSRLGLEDCFEGIICFETL----NPTHKNTVSDDEDDIAF  165 (298)
Q Consensus        96 ~~~~~~~g~~~~L~~l~---~~~~ivS~~~~---~~~~~~l~~l~l~~~f~~i~~~~~~----~~~~~~~~~~~~~~~~~  165 (298)
                      ....++||+.++|+.|+   ++++|+||+..   ..+...++++|+..+|+.++++++.    +.               
T Consensus        31 ~~~~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~~~~---------------   95 (189)
T 3ib6_A           31 PEVVLRKNAKETLEKVKQLGFKQAILSNTATSDTEVIKRVLTNFGIIDYFDFIYASNSELQPGKM---------------   95 (189)
T ss_dssp             TTCCBCTTHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHTTCGGGEEEEEECCTTSSTTCC---------------
T ss_pred             CCceeCcCHHHHHHHHHHCCCEEEEEECCCccchHHHHHHHHhcCchhheEEEEEccccccccCC---------------
Confidence            34688999999998874   78999999887   8899999999999999999998764    32               


Q ss_pred             HHhhhcccCCCCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCC-ccchHHHHHcCC
Q 022360          166 VESAASTTTSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDS-VRNIQAGKRVGL  244 (298)
Q Consensus       166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~p~~~i~iGDs-~~Di~~a~~aG~  244 (298)
                                                             .||+|.+|..+++++|++|++|++|||+ .+|+.+|+++|+
T Consensus        96 ---------------------------------------~KP~p~~~~~~~~~~~~~~~~~l~VGD~~~~Di~~A~~aG~  136 (189)
T 3ib6_A           96 ---------------------------------------EKPDKTIFDFTLNALQIDKTEAVMVGNTFESDIIGANRAGI  136 (189)
T ss_dssp             ---------------------------------------CTTSHHHHHHHHHHHTCCGGGEEEEESBTTTTHHHHHHTTC
T ss_pred             ---------------------------------------CCcCHHHHHHHHHHcCCCcccEEEECCCcHHHHHHHHHCCC
Confidence                                                   7999999999999999999999999999 699999999999


Q ss_pred             eEEEecCCCC--------CCCCCEEeC--CHHHHHHHhHH
Q 022360          245 DTVLIGKSQR--------VKGADYAFE--SIHNIKEAIPE  274 (298)
Q Consensus       245 ~~v~v~~~~~--------~~~ad~i~~--s~~~l~~~l~~  274 (298)
                      .++++.++..        ...++++++  ++.+|.++|.-
T Consensus       137 ~~i~v~~~~~~~~~~~~~~~~~~~v~~~~~l~~l~~~l~l  176 (189)
T 3ib6_A          137 HAIWLQNPEVCLQDERLPLVAPPFVIPVWDLADVPEALLL  176 (189)
T ss_dssp             EEEEECCTTTCBCSSCCCBCSSSCEEEESSGGGHHHHHHH
T ss_pred             eEEEECCccccccccccccCCCcceeccccHHhHHHHHHH
Confidence            9999976553        238899999  99999987743

>1yns_A E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo sapiens} SCOP: c.108.1.22 PDB: 1zs9_A

Probab=99.86  E-value=1.2e-21  Score=175.17  Aligned_cols=117  Identities=9%  Similarity=0.102  Sum_probs=100.5

Q ss_pred             CCCCCChhHHHHHHhCC---CcEEEEeCCChHHHHHHHHHh---CCCCccceeEeecCCCCCCCCCCCCChhhHHHHHhh
Q 022360           96 ENLKPDPVLRSLLLSLP---LRKIIFTNADKVHAVKVLSRL---GLEDCFEGIICFETLNPTHKNTVSDDEDDIAFVESA  169 (298)
Q Consensus        96 ~~~~~~~g~~~~L~~l~---~~~~ivS~~~~~~~~~~l~~l---~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~  169 (298)
                      ....++||+.++|+.|+   ++++|+||++...++..++++   ++.++|+.++++ +.+                    
T Consensus       127 ~~~~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~~~~~~l~~~fd~i~~~-~~~--------------------  185 (261)
T 1yns_A          127 MKAEFFADVVPAVRKWREAGMKVYIYSSGSVEAQKLLFGHSTEGDILELVDGHFDT-KIG--------------------  185 (261)
T ss_dssp             CCBCCCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHTBTTBCCGGGCSEEECG-GGC--------------------
T ss_pred             cccccCcCHHHHHHHHHhCCCeEEEEeCCCHHHHHHHHHhhcccChHhhccEEEec-CCC--------------------
Confidence            34688999999999874   789999999999888888855   589999999877 543                    


Q ss_pred             hcccCCCCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHHcCCeEEEe
Q 022360          170 ASTTTSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTVLI  249 (298)
Q Consensus       170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a~~aG~~~v~v  249 (298)
                                                         +||+|..|..+++++|++|++|++|||+.+|+.+|+++|+.++++
T Consensus       186 -----------------------------------~KP~p~~~~~~~~~lg~~p~~~l~VgDs~~di~aA~~aG~~~i~v  230 (261)
T 1yns_A          186 -----------------------------------HKVESESYRKIADSIGCSTNNILFLTDVTREASAAEEADVHVAVV  230 (261)
T ss_dssp             -----------------------------------CTTCHHHHHHHHHHHTSCGGGEEEEESCHHHHHHHHHTTCEEEEE
T ss_pred             -----------------------------------CCCCHHHHHHHHHHhCcCcccEEEEcCCHHHHHHHHHCCCEEEEE
Confidence                                               499999999999999999999999999999999999999999999


Q ss_pred             cCCCCC------CCCCEEeCCHHHH
Q 022360          250 GKSQRV------KGADYAFESIHNI  268 (298)
Q Consensus       250 ~~~~~~------~~ad~i~~s~~~l  268 (298)
                      .++...      ..++++++++.+|
T Consensus       231 ~~~~~~~~~~~~~~~~~~i~~l~el  255 (261)
T 1yns_A          231 VRPGNAGLTDDEKTYYSLITSFSEL  255 (261)
T ss_dssp             CCTTCCCCCHHHHHHSCEESSGGGC
T ss_pred             eCCCCCcccccccCCCEEECCHHHh
Confidence            764321      3478888888775

>2fi1_A Hydrolase, haloacid dehalogenase-like family; structural genomics, haloacid dehalogenase-like F PSI, protein structure initiative; 1.40A {Streptococcus pneumoniae} SCOP: c.108.1.3

Probab=99.86  E-value=3.2e-21  Score=161.61  Aligned_cols=173  Identities=18%  Similarity=0.188  Sum_probs=120.0

Q ss_pred             cCccEEEEeCCCCccCCCccHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHhCCCHHHHHH-ccCCCC-hhhHHHHh
Q 022360           12 AKYDCLLFDLDDTLYPYSSGIAAACGQNIKDYMVEKLGIERSKIEDLGNLLYKNYGTTMAGLRA-IGYDFD-YDDYHSFV   89 (298)
Q Consensus        12 ~~~k~viFDlDGTL~d~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~-~~~~~~-~~~~~~~~   89 (298)
                      |++|+|+||+||||+++...+..++.+.     .++.|+...... ....+.   +.....+.. .+.... ...+....
T Consensus         4 M~~k~i~fDlDGTL~d~~~~~~~~~~~~-----~~~~g~~~~~~~-~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~   74 (190)
T 2fi1_A            4 MKYHDYIWDLGGTLLDNYETSTAAFVET-----LALYGITQDHDS-VYQALK---VSTPFAIETFAPNLENFLEKYKENE   74 (190)
T ss_dssp             CCCSEEEECTBTTTBCHHHHHHHHHHHH-----HHHTTCCCCHHH-HHHHHH---HCHHHHHHHHCTTCTTHHHHHHHHH
T ss_pred             CcccEEEEeCCCCcCCCHHHHHHHHHHH-----HHHhCCCCCHHH-HHHHHc---cccHHHHHHHhhhHHHHHHHHHHHH
Confidence            4589999999999999777777666653     344566543221 111110   111111111 111100 11222222


Q ss_pred             hcccCCCCCCCChhHHHHHHhC---CCcEEEEeCCChHHHHHHHHHhCCCCccceeEeecCCCCCCCCCCCCChhhHHHH
Q 022360           90 HGRLPYENLKPDPVLRSLLLSL---PLRKIIFTNADKVHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSDDEDDIAFV  166 (298)
Q Consensus        90 ~~~~~~~~~~~~~g~~~~L~~l---~~~~~ivS~~~~~~~~~~l~~l~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~  166 (298)
                      .... .. ..++|++.++|+.+   +.+++++|+... .++..++.+++..+|+.++++++.+.                
T Consensus        75 ~~~~-~~-~~~~~~~~~~l~~l~~~g~~~~i~t~~~~-~~~~~l~~~~~~~~f~~~~~~~~~~~----------------  135 (190)
T 2fi1_A           75 AREL-EH-PILFEGVSDLLEDISNQGGRHFLVSHRND-QVLEILEKTSIAAYFTEVVTSSSGFK----------------  135 (190)
T ss_dssp             HHHT-TS-CCBCTTHHHHHHHHHHTTCEEEEECSSCT-HHHHHHHHTTCGGGEEEEECGGGCCC----------------
T ss_pred             HHhc-Cc-CccCcCHHHHHHHHHHCCCcEEEEECCcH-HHHHHHHHcCCHhheeeeeeccccCC----------------
Confidence            2211 12 33889999998877   478899998764 67888999999999999998876654                


Q ss_pred             HhhhcccCCCCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHHcCCeE
Q 022360          167 ESAASTTTSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDT  246 (298)
Q Consensus       167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a~~aG~~~  246 (298)
                                                            +||++..++.+++++|++  +|++|||+.||++||+.+|+.+
T Consensus       136 --------------------------------------~kp~~~~~~~~~~~~~~~--~~~~iGD~~~Di~~a~~aG~~~  175 (190)
T 2fi1_A          136 --------------------------------------RKPNPESMLYLREKYQIS--SGLVIGDRPIDIEAGQAAGLDT  175 (190)
T ss_dssp             --------------------------------------CTTSCHHHHHHHHHTTCS--SEEEEESSHHHHHHHHHTTCEE
T ss_pred             --------------------------------------CCCCHHHHHHHHHHcCCC--eEEEEcCCHHHHHHHHHcCCeE
Confidence                                                  799999999999999998  9999999999999999999999


Q ss_pred             EEecCC
Q 022360          247 VLIGKS  252 (298)
Q Consensus       247 v~v~~~  252 (298)
                      +++.++
T Consensus       176 ~~~~~~  181 (190)
T 2fi1_A          176 HLFTSI  181 (190)
T ss_dssp             EECSCH
T ss_pred             EEECCC
Confidence            988664

>2oda_A Hypothetical protein pspto_2114; haloacid dehalogenase, phosphonoacetaldehyde hydrolase, protein binding; HET: EPE; 1.90A {Pseudomonas syringae PV}

Probab=99.86  E-value=1.2e-21  Score=168.18  Aligned_cols=121  Identities=12%  Similarity=0.136  Sum_probs=102.3

Q ss_pred             CCCCChhHHHHHHhCC---CcEEEEeCCChHHHHHHHHHhCCCCccceeEeecCCCCCCCCCCCCChhhHHHHHhhhccc
Q 022360           97 NLKPDPVLRSLLLSLP---LRKIIFTNADKVHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSDDEDDIAFVESAASTT  173 (298)
Q Consensus        97 ~~~~~~g~~~~L~~l~---~~~~ivS~~~~~~~~~~l~~l~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  173 (298)
                      ...++||+.++|+.|+   ++++|+|+.....+...+   +  .+|+.++++++.+.                       
T Consensus        34 ~~~~~pg~~e~L~~L~~~g~~~~i~T~~~~~~~~~~~---~--~~~d~v~~~~~~~~-----------------------   85 (196)
T 2oda_A           34 HAQLTPGAQNALKALRDQGMPCAWIDELPEALSTPLA---A--PVNDWMIAAPRPTA-----------------------   85 (196)
T ss_dssp             GGSBCTTHHHHHHHHHHHTCCEEEECCSCHHHHHHHH---T--TTTTTCEECCCCSS-----------------------
T ss_pred             cCCcCcCHHHHHHHHHHCCCEEEEEcCChHHHHHHhc---C--ccCCEEEECCcCCC-----------------------
Confidence            3577899999999884   789999998877664333   3  46888998887664                       


Q ss_pred             CCCCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCCC-CcEEEEcCCccchHHHHHcCCeEEEecCC
Q 022360          174 TSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINP-QRTLFFEDSVRNIQAGKRVGLDTVLIGKS  252 (298)
Q Consensus       174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~p-~~~i~iGDs~~Di~~a~~aG~~~v~v~~~  252 (298)
                                                     +||+|+.+..+++++|+.| ++|+||||+.+||++|+++|+.++++.++
T Consensus        86 -------------------------------~KP~p~~~~~a~~~l~~~~~~~~v~VGDs~~Di~aA~~aG~~~i~v~~g  134 (196)
T 2oda_A           86 -------------------------------GWPQPDACWMALMALNVSQLEGCVLISGDPRLLQSGLNAGLWTIGLASC  134 (196)
T ss_dssp             -------------------------------CTTSTHHHHHHHHHTTCSCSTTCEEEESCHHHHHHHHHHTCEEEEESSS
T ss_pred             -------------------------------CCCChHHHHHHHHHcCCCCCccEEEEeCCHHHHHHHHHCCCEEEEEccC
Confidence                                           7999999999999999975 89999999999999999999999999876


Q ss_pred             CC-----------------------------CCCCCEEeCCHHHHHHHhHHhh
Q 022360          253 QR-----------------------------VKGADYAFESIHNIKEAIPELW  276 (298)
Q Consensus       253 ~~-----------------------------~~~ad~i~~s~~~l~~~l~~~~  276 (298)
                      ..                             ...++++++++.+|.++|..+.
T Consensus       135 ~~~~~~~~~~~~~~~~~e~~~~~~~~~~~l~~~~~d~vi~~~~eL~~~l~~~~  187 (196)
T 2oda_A          135 GPLCGLSPSQWQALNNAEREQRRAQATLKLYSLGVHSVIDHLGELESCLADIA  187 (196)
T ss_dssp             STTTCCCHHHHHHSCHHHHHHHHHHHHHHHHHTTCSEEESSGGGHHHHHHHHH
T ss_pred             CccccccHHHhhhcchhhhhhhHHHHHHHHHHcCCCEEeCCHHHHHHHHHHHH
Confidence            42                             2469999999999999887764

>2g80_A Protein UTR4; YEL038W, UTR4 protein (unknown transcript 4 protein), struct genomics, PSI, protein structure initiative; 2.28A {Saccharomyces cerevisiae} SCOP: c.108.1.22

Probab=99.85  E-value=3.2e-20  Score=165.55  Aligned_cols=116  Identities=13%  Similarity=0.171  Sum_probs=96.2

Q ss_pred             CCCCChhHHHHHHhCCCcEEEEeCCChHHHHHHHHHh--C---------CCCccceeEeecCCCCCCCCCCCCChhhHHH
Q 022360           97 NLKPDPVLRSLLLSLPLRKIIFTNADKVHAVKVLSRL--G---------LEDCFEGIICFETLNPTHKNTVSDDEDDIAF  165 (298)
Q Consensus        97 ~~~~~~g~~~~L~~l~~~~~ivS~~~~~~~~~~l~~l--~---------l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~  165 (298)
                      ...++||+.++|+. +++++|+||+....++..++++  +         +.++|+.++.+.-.+                
T Consensus       123 ~~~~~pgv~e~L~~-g~~l~i~Tn~~~~~~~~~l~~~~~g~~~~~~~l~l~~~~~~~f~~~~~g----------------  185 (253)
T 2g80_A          123 KAPVYADAIDFIKR-KKRVFIYSSGSVKAQKLLFGYVQDPNAPAHDSLDLNSYIDGYFDINTSG----------------  185 (253)
T ss_dssp             CBCCCHHHHHHHHH-CSCEEEECSSCHHHHHHHHHSBCCTTCTTSCCBCCGGGCCEEECHHHHC----------------
T ss_pred             cCCCCCCHHHHHHc-CCEEEEEeCCCHHHHHHHHHhhcccccccccccchHhhcceEEeeeccC----------------
Confidence            46789999999999 9999999999999999988876  3         666777665431101                


Q ss_pred             HHhhhcccCCCCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHHcCCe
Q 022360          166 VESAASTTTSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLD  245 (298)
Q Consensus       166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a~~aG~~  245 (298)
                                                             +||+|+.|..+++++|++|++|++|||+.+|+.+|+++|+.
T Consensus       186 ---------------------------------------~KP~p~~~~~a~~~lg~~p~~~l~vgDs~~di~aA~~aG~~  226 (253)
T 2g80_A          186 ---------------------------------------KKTETQSYANILRDIGAKASEVLFLSDNPLELDAAAGVGIA  226 (253)
T ss_dssp             ---------------------------------------CTTCHHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHTTTCE
T ss_pred             ---------------------------------------CCCCHHHHHHHHHHcCCCcccEEEEcCCHHHHHHHHHcCCE
Confidence                                                   59999999999999999999999999999999999999999


Q ss_pred             EEEecCC-CC---CCCCCEEeCCHHHH
Q 022360          246 TVLIGKS-QR---VKGADYAFESIHNI  268 (298)
Q Consensus       246 ~v~v~~~-~~---~~~ad~i~~s~~~l  268 (298)
                      ++++.+. ..   ...++++++++.+|
T Consensus       227 ~i~v~~~~~~~~~~~~~~~~i~~l~eL  253 (253)
T 2g80_A          227 TGLASRPGNAPVPDGQKYQVYKNFETL  253 (253)
T ss_dssp             EEEECCTTSCCCCSSCCSCEESCSTTC
T ss_pred             EEEEcCCCCCCcccccCCCccCChhhC
Confidence            9999663 32   12377888887763

>3m1y_A Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, phophoserine phosphatase, protein structure initiative, structural genomics; 2.40A {Helicobacter pylori} SCOP: c.108.1.0

Probab=99.85  E-value=1.4e-21  Score=167.19  Aligned_cols=131  Identities=13%  Similarity=0.103  Sum_probs=102.5

Q ss_pred             CCCChhHHHHHHhCC---CcEEEEeCCChHHHHHHHHHhCCCCccceeEeecCCCCCCCCCCCCChhhHHHHHhhhcccC
Q 022360           98 LKPDPVLRSLLLSLP---LRKIIFTNADKVHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSDDEDDIAFVESAASTTT  174 (298)
Q Consensus        98 ~~~~~g~~~~L~~l~---~~~~ivS~~~~~~~~~~l~~l~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  174 (298)
                      ..++|++.++|+.++   ++++++|++....++..++.+++..+|+.++..++...                        
T Consensus        74 ~~~~~~~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~gl~~~f~~~~~~~~~~~------------------------  129 (217)
T 3m1y_A           74 LPLFEGALELVSALKEKNYKVVCFSGGFDLATNHYRDLLHLDAAFSNTLIVENDAL------------------------  129 (217)
T ss_dssp             CCBCBTHHHHHHHHHTTTEEEEEEEEEEHHHHHHHHHHHTCSEEEEEEEEEETTEE------------------------
T ss_pred             CcCCCCHHHHHHHHHHCCCEEEEEcCCchhHHHHHHHHcCcchhccceeEEeCCEE------------------------
Confidence            678999999988874   67899999999999999999999999999986654211                        


Q ss_pred             CCCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHHcCCeEEEecCCCC
Q 022360          175 SANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTVLIGKSQR  254 (298)
Q Consensus       175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a~~aG~~~v~v~~~~~  254 (298)
                                .+.+...      ..    .+|||+.+++.+++++|++|++|++|||+.+|+.+|+.+|+.+++.+....
T Consensus       130 ----------~~~~~~~------~~----~~k~k~~~~~~~~~~~g~~~~~~i~vGDs~~Di~~a~~aG~~~~~~~~~~l  189 (217)
T 3m1y_A          130 ----------NGLVTGH------MM----FSHSKGEMLLVLQRLLNISKTNTLVVGDGANDLSMFKHAHIKIAFNAKEVL  189 (217)
T ss_dssp             ----------EEEEEES------CC----STTHHHHHHHHHHHHHTCCSTTEEEEECSGGGHHHHTTCSEEEEESCCHHH
T ss_pred             ----------EeeeccC------CC----CCCChHHHHHHHHHHcCCCHhHEEEEeCCHHHHHHHHHCCCeEEECccHHH
Confidence                      0000000      00    169999999999999999999999999999999999999999988333334


Q ss_pred             CCCCCEEeCCHHHHHHHhH
Q 022360          255 VKGADYAFESIHNIKEAIP  273 (298)
Q Consensus       255 ~~~ad~i~~s~~~l~~~l~  273 (298)
                      +..|++++++ .+|.+++.
T Consensus       190 ~~~ad~v~~~-~dl~~~~~  207 (217)
T 3m1y_A          190 KQHATHCINE-PDLALIKP  207 (217)
T ss_dssp             HTTCSEEECS-SBGGGGTT
T ss_pred             HHhcceeecc-cCHHHHHH
Confidence            7889999986 35544443

>2i6x_A Hydrolase, haloacid dehalogenase-like family; HAD superfamily, struct genomics, PSI-2, protein structure initiative; HET: MSE; 2.40A {Porphyromonas gingivalis}

Probab=99.85  E-value=2.7e-21  Score=164.91  Aligned_cols=102  Identities=19%  Similarity=0.272  Sum_probs=92.5

Q ss_pred             CCCChhHHHHHHhCC--CcEEEEeCCChHHHHHHHHH------hCCCCccceeEeecCCCCCCCCCCCCChhhHHHHHhh
Q 022360           98 LKPDPVLRSLLLSLP--LRKIIFTNADKVHAVKVLSR------LGLEDCFEGIICFETLNPTHKNTVSDDEDDIAFVESA  169 (298)
Q Consensus        98 ~~~~~g~~~~L~~l~--~~~~ivS~~~~~~~~~~l~~------l~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~  169 (298)
                      ..++|++.++|+.++  ++++++|++....+...++.      +++..+|+.++++++.+.                   
T Consensus        88 ~~~~~~~~~~l~~l~~g~~~~i~t~~~~~~~~~~~~~l~~~~~~~l~~~f~~~~~~~~~~~-------------------  148 (211)
T 2i6x_A           88 EEISAEKFDYIDSLRPDYRLFLLSNTNPYVLDLAMSPRFLPSGRTLDSFFDKVYASCQMGK-------------------  148 (211)
T ss_dssp             EEECHHHHHHHHHHTTTSEEEEEECCCHHHHHHHTSTTSSTTCCCGGGGSSEEEEHHHHTC-------------------
T ss_pred             cccChHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHhhhccccccCHHHHcCeEEeecccCC-------------------
Confidence            367899999999875  78999999999999999988      799999999999887664                   


Q ss_pred             hcccCCCCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHHcCCeEEEe
Q 022360          170 ASTTTSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTVLI  249 (298)
Q Consensus       170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a~~aG~~~v~v  249 (298)
                                                         +||+|..+..+++++|++|++|++|||+.+|+.+|+++|+.++++
T Consensus       149 -----------------------------------~Kp~~~~~~~~~~~~~~~~~~~~~igD~~~Di~~a~~aG~~~~~~  193 (211)
T 2i6x_A          149 -----------------------------------YKPNEDIFLEMIADSGMKPEETLFIDDGPANVATAERLGFHTYCP  193 (211)
T ss_dssp             -----------------------------------CTTSHHHHHHHHHHHCCCGGGEEEECSCHHHHHHHHHTTCEEECC
T ss_pred             -----------------------------------CCCCHHHHHHHHHHhCCChHHeEEeCCCHHHHHHHHHcCCEEEEE
Confidence                                               799999999999999999999999999999999999999999988


Q ss_pred             cCCC
Q 022360          250 GKSQ  253 (298)
Q Consensus       250 ~~~~  253 (298)
                      +++.
T Consensus       194 ~~~~  197 (211)
T 2i6x_A          194 DNGE  197 (211)
T ss_dssp             CTTC
T ss_pred             CCHH
Confidence            7654

>3l8h_A Putative haloacid dehalogenase-like hydrolase; HAD superfamily, GMHB, D-glycero-D-manno-heptose-1, 7-bispho phosphatase; HET: FX1; 1.68A {Bordetella bronchiseptica}

Probab=99.84  E-value=4.4e-21  Score=160.77  Aligned_cols=121  Identities=15%  Similarity=0.171  Sum_probs=100.5

Q ss_pred             CCCChhHHHHHHhC---CCcEEEEeCCCh---------------HHHHHHHHHhCCCCccceeEee-----cCCCCCCCC
Q 022360           98 LKPDPVLRSLLLSL---PLRKIIFTNADK---------------VHAVKVLSRLGLEDCFEGIICF-----ETLNPTHKN  154 (298)
Q Consensus        98 ~~~~~g~~~~L~~l---~~~~~ivS~~~~---------------~~~~~~l~~l~l~~~f~~i~~~-----~~~~~~~~~  154 (298)
                      ..++||+.++|+.|   +++++|+||+..               ..+...++.+|  .+|+.++.+     ++.+.    
T Consensus        26 ~~~~~g~~~~l~~L~~~g~~~~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~g--~~~~~~~~~~~~~~~~~~~----   99 (179)
T 3l8h_A           26 WIALPGSLQAIARLTQADWTVVLATNQSGLARGLFDTATLNAIHDKMHRALAQMG--GVVDAIFMCPHGPDDGCAC----   99 (179)
T ss_dssp             CCBCTTHHHHHHHHHHTTCEEEEEEECTTTTTTSSCHHHHHHHHHHHHHHHHHTT--CCCCEEEEECCCTTSCCSS----
T ss_pred             ceECcCHHHHHHHHHHCCCEEEEEECCCccccCcCCHHHHHHHHHHHHHHHHhCC--CceeEEEEcCCCCCCCCCC----
Confidence            57789999998887   478999999986               56677888888  445555532     33322    


Q ss_pred             CCCCChhhHHHHHhhhcccCCCCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCcc
Q 022360          155 TVSDDEDDIAFVESAASTTTSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVR  234 (298)
Q Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~  234 (298)
                                                                        +||+|.+|+.+++++|++|++|++|||+.+
T Consensus       100 --------------------------------------------------~KP~~~~~~~~~~~~~~~~~~~~~vGD~~~  129 (179)
T 3l8h_A          100 --------------------------------------------------RKPLPGMYRDIARRYDVDLAGVPAVGDSLR  129 (179)
T ss_dssp             --------------------------------------------------STTSSHHHHHHHHHHTCCCTTCEEEESSHH
T ss_pred             --------------------------------------------------CCCCHHHHHHHHHHcCCCHHHEEEECCCHH
Confidence                                                              799999999999999999999999999999


Q ss_pred             chHHHHHcCCeEEEecCCCC--------CCCCCEEeCCHHHHHHHhHH
Q 022360          235 NIQAGKRVGLDTVLIGKSQR--------VKGADYAFESIHNIKEAIPE  274 (298)
Q Consensus       235 Di~~a~~aG~~~v~v~~~~~--------~~~ad~i~~s~~~l~~~l~~  274 (298)
                      |+++|+++|+.++++.++..        ...|+++++++.+|.++|.+
T Consensus       130 Di~~a~~aG~~~i~v~~g~~~~~~~~~~~~~~d~v~~~l~el~~~l~~  177 (179)
T 3l8h_A          130 DLQAAAQAGCAPWLVQTGNGRKTLAQGGLPEGTRVCEDLAAVAEQLLQ  177 (179)
T ss_dssp             HHHHHHHHTCEEEEESTTTHHHHHHHCCCCTTEEEESSHHHHHHHHHH
T ss_pred             HHHHHHHCCCcEEEECCCCcchhhhhcccCCCcEEecCHHHHHHHHHh
Confidence            99999999999999988763        36789999999999887753

>2p11_A Hypothetical protein; putative haloacid dehalogenase-like hydrolase, structural GE joint center for structural genomics, JCSG; 2.20A {Burkholderia xenovorans}

Probab=99.83  E-value=9.5e-21  Score=165.04  Aligned_cols=197  Identities=20%  Similarity=0.213  Sum_probs=133.4

Q ss_pred             cCccEEEEeCCCCccCCCccHHHHHHHHHHHHHHHHhCCChhHH-HHHHHHHHHHhCCC-HH-HHHHcc----CCCChhh
Q 022360           12 AKYDCLLFDLDDTLYPYSSGIAAACGQNIKDYMVEKLGIERSKI-EDLGNLLYKNYGTT-MA-GLRAIG----YDFDYDD   84 (298)
Q Consensus        12 ~~~k~viFDlDGTL~d~~~~~~~~~~~~~~~~~~~~~g~~~~~~-~~~~~~~~~~~g~~-~~-~~~~~~----~~~~~~~   84 (298)
                      .++|+|+|||||||+|+...+..++...+     +..|++.... ......+....|.. .. .+..++    .......
T Consensus         9 ~~~k~viFDlDGTL~ds~~~~~~~~~~~~-----~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~   83 (231)
T 2p11_A            9 PHDIVFLFDCDNTLLDNDHVLADLRAHMM-----REFGAQNSARYWEIFETLRTELGYADYLGALQRYRLEQPRDTRLLL   83 (231)
T ss_dssp             CCSEEEEECCBTTTBCHHHHHHHHHHHHH-----HHHCHHHHHHHHHHHHHHHHHC-CCCHHHHHHHHHHHCTTCTGGGG
T ss_pred             CCCeEEEEcCCCCCEecHHHHHHHHHHHH-----HHcCCCcchHHHHHHHHHHHhcCchHHHHHHHHHHhccccchHHHH
Confidence            45789999999999998777777766533     3345433221 01112222333432 11 111111    1111122


Q ss_pred             HHHHhhcccCCCCCCCChhHHHHHHhCC--CcEEEEeCCChHHHHHHHHHhCCCCccceeEeecCCCCCCCCCCCCChhh
Q 022360           85 YHSFVHGRLPYENLKPDPVLRSLLLSLP--LRKIIFTNADKVHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSDDEDD  162 (298)
Q Consensus        85 ~~~~~~~~~~~~~~~~~~g~~~~L~~l~--~~~~ivS~~~~~~~~~~l~~l~l~~~f~~i~~~~~~~~~~~~~~~~~~~~  162 (298)
                      +...+...  .....++||+.++|+.|+  .+++|+||+....++..++++|+.++|+.++..                 
T Consensus        84 ~~~~~~~~--~~~~~~~~g~~~~l~~l~~~g~~~i~Tn~~~~~~~~~l~~~gl~~~f~~~~~~-----------------  144 (231)
T 2p11_A           84 MSSFLIDY--PFASRVYPGALNALRHLGARGPTVILSDGDVVFQPRKIARSGLWDEVEGRVLI-----------------  144 (231)
T ss_dssp             GHHHHHHC--CGGGGBCTTHHHHHHHHHTTSCEEEEEECCSSHHHHHHHHTTHHHHTTTCEEE-----------------
T ss_pred             HHHHHHHH--HHhCCcCccHHHHHHHHHhCCCEEEEeCCCHHHHHHHHHHcCcHHhcCeeEEe-----------------
Confidence            22222221  234678999999999874  278999999999999999999999898876542                 


Q ss_pred             HHHHHhhhcccCCCCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCcc---chHHH
Q 022360          163 IAFVESAASTTTSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVR---NIQAG  239 (298)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~---Di~~a  239 (298)
                                                                +++|+..+..+++  +++|++|++|||+.+   |+.+|
T Consensus       145 ------------------------------------------~~~K~~~~~~~~~--~~~~~~~~~vgDs~~d~~di~~A  180 (231)
T 2p11_A          145 ------------------------------------------YIHKELMLDQVME--CYPARHYVMVDDKLRILAAMKKA  180 (231)
T ss_dssp             ------------------------------------------ESSGGGCHHHHHH--HSCCSEEEEECSCHHHHHHHHHH
T ss_pred             ------------------------------------------cCChHHHHHHHHh--cCCCceEEEEcCccchhhhhHHH
Confidence                                                      2344567777776  789999999999998   99999


Q ss_pred             HHcCCeEEEecCCCC--------CC-CCCEEeCCHHHHHHHhHHhh
Q 022360          240 KRVGLDTVLIGKSQR--------VK-GADYAFESIHNIKEAIPELW  276 (298)
Q Consensus       240 ~~aG~~~v~v~~~~~--------~~-~ad~i~~s~~~l~~~l~~~~  276 (298)
                      +++|+.++++.++..        .. .++++++++.+|.++|.+++
T Consensus       181 ~~aG~~~i~v~~g~~~~~~~~l~~~~~~~~~i~~~~el~~~l~~~~  226 (231)
T 2p11_A          181 WGARLTTVFPRQGHYAFDPKEISSHPPADVTVERIGDLVEMDAEWL  226 (231)
T ss_dssp             HGGGEEEEEECCSSSSSCHHHHHHSCCCSEEESSGGGGGGCGGGGC
T ss_pred             HHcCCeEEEeCCCCCCCcchhccccCCCceeecCHHHHHHHHHHHH
Confidence            999999999987631        12 49999999999988887654

>2gmw_A D,D-heptose 1,7-bisphosphate phosphatase; Zn-binding protein, hydrolase; 1.50A {Escherichia coli} SCOP: c.108.1.19 PDB: 3esq_A 3esr_A 3l1u_A 3l1v_A 3l8e_A 3l8f_A 3l8g_A*

Probab=99.83  E-value=4.4e-20  Score=159.65  Aligned_cols=133  Identities=16%  Similarity=0.175  Sum_probs=102.6

Q ss_pred             CCCChhHHHHHHhC---CCcEEEEeCCC---------------hHHHHHHHHHhCCCCccceeEeecCCCCCCCCCCCCC
Q 022360           98 LKPDPVLRSLLLSL---PLRKIIFTNAD---------------KVHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSDD  159 (298)
Q Consensus        98 ~~~~~g~~~~L~~l---~~~~~ivS~~~---------------~~~~~~~l~~l~l~~~f~~i~~~~~~~~~~~~~~~~~  159 (298)
                      ..++||+.++|+.|   +++++|+||+.               ...++..++.+|+.  |+.++.+.+...  +      
T Consensus        49 ~~~~pg~~e~L~~L~~~G~~~~ivTn~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~--f~~~~~~~~~~~--~------  118 (211)
T 2gmw_A           49 FEFIDGVIDAMRELKKMGFALVVVTNQSGIARGKFTEAQFETLTEWMDWSLADRDVD--LDGIYYCPHHPQ--G------  118 (211)
T ss_dssp             CCBCTTHHHHHHHHHHTTCEEEEEEECTHHHHTSSCHHHHHHHHHHHHHHHHHTTCC--CSEEEEECCBTT--C------
T ss_pred             CcCCcCHHHHHHHHHHCCCeEEEEECcCCcCCCccCHHHHHHHHHHHHHHHHHcCCc--eEEEEECCcCCC--C------
Confidence            57789999988877   47899999998               47788899999987  777665432100  0      


Q ss_pred             hhhHHHHHhhhcccCCCCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccchHHH
Q 022360          160 EDDIAFVESAASTTTSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAG  239 (298)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a  239 (298)
                                         .    +.++...       .    ..+||+|.++..++++++++|++|++|||+.+|+.+|
T Consensus       119 -------------------~----~~~~~~~-------~----~~~KP~p~~~~~~~~~lgi~~~~~~~VGD~~~Di~~a  164 (211)
T 2gmw_A          119 -------------------S----VEEFRQV-------C----DCRKPHPGMLLSARDYLHIDMAASYMVGDKLEDMQAA  164 (211)
T ss_dssp             -------------------S----SGGGBSC-------C----SSSTTSCHHHHHHHHHHTBCGGGCEEEESSHHHHHHH
T ss_pred             -------------------c----ccccCcc-------C----cCCCCCHHHHHHHHHHcCCCHHHEEEEcCCHHHHHHH
Confidence                               0    0000000       0    0279999999999999999999999999999999999


Q ss_pred             HHcCCeE-EEecCCCC-----CCCCCEEeCCHHHHHHHhHH
Q 022360          240 KRVGLDT-VLIGKSQR-----VKGADYAFESIHNIKEAIPE  274 (298)
Q Consensus       240 ~~aG~~~-v~v~~~~~-----~~~ad~i~~s~~~l~~~l~~  274 (298)
                      +++|+.+ +++.++..     ...++++++++.+|.+.|..
T Consensus       165 ~~aG~~~~i~v~~g~~~~~~~~~~~d~vi~~l~el~~~l~~  205 (211)
T 2gmw_A          165 VAANVGTKVLVRTGKPITPEAENAADWVLNSLADLPQAIKK  205 (211)
T ss_dssp             HHTTCSEEEEESSSSCCCHHHHHHCSEEESCGGGHHHHHHC
T ss_pred             HHCCCceEEEEecCCCccccccCCCCEEeCCHHHHHHHHHh
Confidence            9999999 99987753     24589999999999887765

>1rku_A Homoserine kinase; phosphoserine phosphatase, phosphoserine:homoserine phosphotransferase, THRH, phosphoserine phosphoryl donor; 1.47A {Pseudomonas aeruginosa} SCOP: c.108.1.11 PDB: 1rkv_A

Probab=99.81  E-value=2.8e-20  Score=158.56  Aligned_cols=130  Identities=8%  Similarity=0.011  Sum_probs=103.1

Q ss_pred             CCCCChhHHHHHHhCC--CcEEEEeCCChHHHHHHHHHhCCCCcc-ceeEeecCCCCCCCCCCCCChhhHHHHHhhhccc
Q 022360           97 NLKPDPVLRSLLLSLP--LRKIIFTNADKVHAVKVLSRLGLEDCF-EGIICFETLNPTHKNTVSDDEDDIAFVESAASTT  173 (298)
Q Consensus        97 ~~~~~~g~~~~L~~l~--~~~~ivS~~~~~~~~~~l~~l~l~~~f-~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  173 (298)
                      ...++||+.++|+.|+  ++++|+|++....++..++++|+..+| +.++++++....                      
T Consensus        67 ~~~~~~g~~~~l~~l~~~~~~~i~s~~~~~~~~~~l~~~gl~~~f~~~~~~~~~~~~~----------------------  124 (206)
T 1rku_A           67 TLKPLEGAVEFVDWLRERFQVVILSDTFYEFSQPLMRQLGFPTLLCHKLEIDDSDRVV----------------------  124 (206)
T ss_dssp             TCCCCTTHHHHHHHHHTTSEEEEEEEEEHHHHHHHHHHTTCCCEEEEEEEECTTSCEE----------------------
T ss_pred             hcCCCccHHHHHHHHHhcCcEEEEECChHHHHHHHHHHcCCcceecceeEEcCCceEE----------------------
Confidence            4678999999998876  689999999999999999999999999 456655443210                      


Q ss_pred             CCCCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHHcCCeEEEecCCC
Q 022360          174 TSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTVLIGKSQ  253 (298)
Q Consensus       174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a~~aG~~~v~v~~~~  253 (298)
                                              .     .-+|+|..+..++++++..|++|++|||+.+|+.+|+.+|+.+++.....
T Consensus       125 ------------------------~-----~~~p~p~~~~~~l~~l~~~~~~~~~iGD~~~Di~~a~~aG~~~~~~~~~~  175 (206)
T 1rku_A          125 ------------------------G-----YQLRQKDPKRQSVIAFKSLYYRVIAAGDSYNDTTMLSEAHAGILFHAPEN  175 (206)
T ss_dssp             ------------------------E-----EECCSSSHHHHHHHHHHHTTCEEEEEECSSTTHHHHHHSSEEEEESCCHH
T ss_pred             ------------------------e-----eecCCCchHHHHHHHHHhcCCEEEEEeCChhhHHHHHhcCccEEECCcHH
Confidence                                    0     01477899999999999999999999999999999999999977532211


Q ss_pred             C-CCCCCEE-eCCHHHHHHHhHHhhc
Q 022360          254 R-VKGADYA-FESIHNIKEAIPELWE  277 (298)
Q Consensus       254 ~-~~~ad~i-~~s~~~l~~~l~~~~~  277 (298)
                      . ...++++ ++++.+|.+.|.++++
T Consensus       176 ~~~~~~~~~~~~~~~~l~~~l~~~~~  201 (206)
T 1rku_A          176 VIREFPQFPAVHTYEDLKREFLKASS  201 (206)
T ss_dssp             HHHHCTTSCEECSHHHHHHHHHHHCS
T ss_pred             HHHHHhhhccccchHHHHHHHHHHhc
Confidence            1 2356664 9999999999988764

>1l7m_A Phosphoserine phosphatase; rossmann fold, four-helix bundle, B-hairpin, structural genomics, BSGC structure funded by NIH; 1.48A {Methanocaldococcus jannaschii} SCOP: c.108.1.4 PDB: 1f5s_A 1l7n_A 1l7p_A* 1l7o_A* 1j97_A*

Probab=99.81  E-value=9e-20  Score=154.57  Aligned_cols=130  Identities=19%  Similarity=0.232  Sum_probs=95.1

Q ss_pred             CCCChhHHHHHHhC---CCcEEEEeCCChHHHHHHHHHhCCCCccceeEeecCCCCCCCCCCCCChhhHHHHHhhhcccC
Q 022360           98 LKPDPVLRSLLLSL---PLRKIIFTNADKVHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSDDEDDIAFVESAASTTT  174 (298)
Q Consensus        98 ~~~~~g~~~~L~~l---~~~~~ivS~~~~~~~~~~l~~l~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  174 (298)
                      ..+.|++.++|+.+   +++++++|++....++..++.+++..+|+..+...+...                        
T Consensus        75 ~~l~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------------  130 (211)
T 1l7m_A           75 ITPTEGAEETIKELKNRGYVVAVVSGGFDIAVNKIKEKLGLDYAFANRLIVKDGKL------------------------  130 (211)
T ss_dssp             CCBCTTHHHHHHHHHHTTEEEEEEEEEEHHHHHHHHHHHTCSEEEEEEEEEETTEE------------------------
T ss_pred             CCCCccHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHcCCCeEEEeeeEEECCEE------------------------
Confidence            35568888888876   477899999988888888999998777766544322000                        


Q ss_pred             CCCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHHcCCeEEEecCCCC
Q 022360          175 SANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTVLIGKSQR  254 (298)
Q Consensus       175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a~~aG~~~v~v~~~~~  254 (298)
                                .+.....      ..    .+++|+..+..+++++|++|++|++|||+.||++|++.+|+.+++.+....
T Consensus       131 ----------~~~~~~~------~~----~~~~K~~~l~~~~~~lgi~~~~~~~iGD~~~Di~~~~~ag~~~~~~~~~~~  190 (211)
T 1l7m_A          131 ----------TGDVEGE------VL----KENAKGEILEKIAKIEGINLEDTVAVGDGANDISMFKKAGLKIAFCAKPIL  190 (211)
T ss_dssp             ----------EEEEECS------SC----STTHHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHCSEEEEESCCHHH
T ss_pred             ----------cCCcccC------cc----CCccHHHHHHHHHHHcCCCHHHEEEEecChhHHHHHHHCCCEEEECCCHHH
Confidence                      0000000      00    046778999999999999999999999999999999999998765533333


Q ss_pred             CCCCCEEeCC--HHHHHHH
Q 022360          255 VKGADYAFES--IHNIKEA  271 (298)
Q Consensus       255 ~~~ad~i~~s--~~~l~~~  271 (298)
                      +..|++++.+  +.+|.++
T Consensus       191 ~~~a~~v~~~~~~~~l~~~  209 (211)
T 1l7m_A          191 KEKADICIEKRDLREILKY  209 (211)
T ss_dssp             HTTCSEEECSSCGGGGGGG
T ss_pred             HhhcceeecchhHHHHHHh
Confidence            6779999998  8887654

>1nnl_A L-3-phosphoserine phosphatase; PSP, HPSP, phospho-aspartyl, hydrolase; 1.53A {Homo sapiens} SCOP: c.108.1.4 PDB: 1l8l_A* 1l8o_A

Probab=99.81  E-value=1.9e-20  Score=161.81  Aligned_cols=202  Identities=12%  Similarity=0.137  Sum_probs=123.2

Q ss_pred             ccCccEEEEeCCCCccCCCccHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHhCCCHHHH-H-Hc-cCCCChhhHHH
Q 022360           11 AAKYDCLLFDLDDTLYPYSSGIAAACGQNIKDYMVEKLGIERSKIEDLGNLLYKNYGTTMAGL-R-AI-GYDFDYDDYHS   87 (298)
Q Consensus        11 ~~~~k~viFDlDGTL~d~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~-~-~~-~~~~~~~~~~~   87 (298)
                      .+++|+|+|||||||+++.. +    .     .+.+..|...............  ....... . .. ......+.+..
T Consensus        11 ~~~~k~viFD~DGTLvd~~~-~----~-----~~~~~~g~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~   78 (225)
T 1nnl_A           11 FYSADAVCFDVDSTVIREEG-I----D-----ELAKICGVEDAVSEMTRRAMGG--AVPFKAALTERLALIQPSREQVQR   78 (225)
T ss_dssp             HHHCSEEEEETBTTTBSSCH-H----H-----HHHHHTTCTTTC--------------CHHHHHHHHHHHHCCCHHHHHH
T ss_pred             HhhCCEEEEeCccccccccc-H----H-----HHHHHhCCcHHHHHHHHHHHcC--CccHHHHHHHHHHHhcCCHHHHHH
Confidence            35589999999999999653 1    1     1345556543211111110000  0011111 0 00 01122333443


Q ss_pred             HhhcccCCCCCCCChhHHHHHHhC---CCcEEEEeCCChHHHHHHHHHhCCC--CccceeEeecCCCCCCCCCCCCChhh
Q 022360           88 FVHGRLPYENLKPDPVLRSLLLSL---PLRKIIFTNADKVHAVKVLSRLGLE--DCFEGIICFETLNPTHKNTVSDDEDD  162 (298)
Q Consensus        88 ~~~~~~~~~~~~~~~g~~~~L~~l---~~~~~ivS~~~~~~~~~~l~~l~l~--~~f~~i~~~~~~~~~~~~~~~~~~~~  162 (298)
                      ....    ....++||+.++|+.|   +++++|+||+....++..++++|+.  .+|+.++.....+.+.+.+       
T Consensus        79 ~~~~----~~~~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~~~f~~~~~~~~~~~~~~~~-------  147 (225)
T 1nnl_A           79 LIAE----QPPHLTPGIRELVSRLQERNVQVFLISGGFRSIVEHVASKLNIPATNVFANRLKFYFNGEYAGFD-------  147 (225)
T ss_dssp             HHHH----SCCCBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCCGGGEEEECEEECTTSCEEEEC-------
T ss_pred             HHHh----ccCCCCccHHHHHHHHHHCCCcEEEEeCChHHHHHHHHHHcCCCcccEEeeeEEEcCCCcEecCC-------
Confidence            3332    2357889999999887   4789999999999999999999997  4887765322111100000       


Q ss_pred             HHHHHhhhcccCCCCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHHc
Q 022360          163 IAFVESAASTTTSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRV  242 (298)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a~~a  242 (298)
                                                 .+      .+.  ..++|||..+..+++++|+  ++|++|||+.+|+.+|+++
T Consensus       148 ---------------------------~~------~~~--~~~~~Kp~~~~~~~~~~~~--~~~~~vGDs~~Di~~a~~a  190 (225)
T 1nnl_A          148 ---------------------------ET------QPT--AESGGKGKVIKLLKEKFHF--KKIIMIGDGATDMEACPPA  190 (225)
T ss_dssp             ---------------------------TT------SGG--GSTTHHHHHHHHHHHHHCC--SCEEEEESSHHHHTTTTTS
T ss_pred             ---------------------------CC------Ccc--cCCCchHHHHHHHHHHcCC--CcEEEEeCcHHhHHHHHhC
Confidence                                       00      000  0036788999999999998  7899999999999999999


Q ss_pred             CCeEEEecCCCC----CCCCCEEeCCHHHHHHHhH
Q 022360          243 GLDTVLIGKSQR----VKGADYAFESIHNIKEAIP  273 (298)
Q Consensus       243 G~~~v~v~~~~~----~~~ad~i~~s~~~l~~~l~  273 (298)
                      |+ +++++....    ...++++++++.+|.+.|.
T Consensus       191 g~-~i~~~~~~~~~~~~~~~~~~~~~~~el~~~l~  224 (225)
T 1nnl_A          191 DA-FIGFGGNVIRQQVKDNAKWYITDFVELLGELE  224 (225)
T ss_dssp             SE-EEEECSSCCCHHHHHHCSEEESCGGGGCC---
T ss_pred             Ce-EEEecCccccHHHHhcCCeeecCHHHHHHHHh
Confidence            99 777754332    3468999999998876553

>2b0c_A Putative phosphatase; alpha-D-glucose-1-phosphate, structural genomic protein structure initiative, midwest center for structural genomics, MCSG; HET: G1P; 2.00A {Escherichia coli} SCOP: c.108.1.2

Probab=99.81  E-value=2.4e-20  Score=158.21  Aligned_cols=102  Identities=20%  Similarity=0.404  Sum_probs=89.9

Q ss_pred             CCCChhHHHHHHhCC---CcEEEEeCCChHHHHHHHHH-hCCCCccceeEeecCCCCCCCCCCCCChhhHHHHHhhhccc
Q 022360           98 LKPDPVLRSLLLSLP---LRKIIFTNADKVHAVKVLSR-LGLEDCFEGIICFETLNPTHKNTVSDDEDDIAFVESAASTT  173 (298)
Q Consensus        98 ~~~~~g~~~~L~~l~---~~~~ivS~~~~~~~~~~l~~-l~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  173 (298)
                      ..++|++.++|+.++   .+++++|++....+...++. +++..+|+.++++++.+.                       
T Consensus        90 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~~~~~~~l~~~f~~~~~~~~~~~-----------------------  146 (206)
T 2b0c_A           90 VALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEIRDAADHIYLSQDLGM-----------------------  146 (206)
T ss_dssp             EEECHHHHHHHHHHHHTTCEEEEEECCCCCTTSCCGGGCHHHHHHCSEEEEHHHHTC-----------------------
T ss_pred             cccCccHHHHHHHHHHCCCeEEEEECCChHHHHHHHHhccChhhheeeEEEecccCC-----------------------
Confidence            467899999998874   78999999988877776666 788889999999877664                       


Q ss_pred             CCCCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHHcCCeEEEecCCC
Q 022360          174 TSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTVLIGKSQ  253 (298)
Q Consensus       174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a~~aG~~~v~v~~~~  253 (298)
                                                     .||+|..+..+++++|++|++|++|||+.+|+.+|+++|+.++++.++.
T Consensus       147 -------------------------------~Kp~~~~~~~~~~~~~~~~~~~~~vgD~~~Di~~a~~aG~~~~~~~~~~  195 (206)
T 2b0c_A          147 -------------------------------RKPEARIYQHVLQAEGFSPSDTVFFDDNADNIEGANQLGITSILVKDKT  195 (206)
T ss_dssp             -------------------------------CTTCHHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHTTTCEEEECCSTT
T ss_pred             -------------------------------CCCCHHHHHHHHHHcCCCHHHeEEeCCCHHHHHHHHHcCCeEEEecCCc
Confidence                                           7999999999999999999999999999999999999999999887654

>2ho4_A Haloacid dehalogenase-like hydrolase domain containing 2; HDHD2, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; 2.20A {Mus musculus} PDB: 3hlt_A

Probab=99.80  E-value=1.1e-21  Score=172.72  Aligned_cols=121  Identities=15%  Similarity=0.119  Sum_probs=92.6

Q ss_pred             CChhHHHHHHhC--CCcEEEEeCCChHHHHHHHHHhCCCCccc---eeEeecCCCCCCCCCCCCChhhHHHHHhhhcccC
Q 022360          100 PDPVLRSLLLSL--PLRKIIFTNADKVHAVKVLSRLGLEDCFE---GIICFETLNPTHKNTVSDDEDDIAFVESAASTTT  174 (298)
Q Consensus       100 ~~~g~~~~L~~l--~~~~~ivS~~~~~~~~~~l~~l~l~~~f~---~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  174 (298)
                      ++|++.++|+.+  +.++ ++|+.+.......+..+++..+|+   .++++++.+.                        
T Consensus       123 ~~~~~~~~l~~l~~~~~~-i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------------  177 (259)
T 2ho4_A          123 HYQLLNQAFRLLLDGAPL-IAIHKARYYKRKDGLALGPGPFVTALEYATDTKAMVV------------------------  177 (259)
T ss_dssp             BHHHHHHHHHHHHTTCCE-EESCCCSEEEETTEEEECSHHHHHHHHHHHTCCCEEC------------------------
T ss_pred             CHHHHHHHHHHHHCCCEE-EEECCCCcCcccCCcccCCcHHHHHHHHHhCCCceEe------------------------
Confidence            567777777765  3556 777776555444455566666665   3333333322                        


Q ss_pred             CCCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCc-cchHHHHHcCCeEEEecCCC
Q 022360          175 SANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSV-RNIQAGKRVGLDTVLIGKSQ  253 (298)
Q Consensus       175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~p~~~i~iGDs~-~Di~~a~~aG~~~v~v~~~~  253 (298)
                                                    +||+|.++..+++++|++|++|++|||+. ||+.||+++|+.++++.++.
T Consensus       178 ------------------------------~Kp~~~~~~~~~~~lgi~~~~~~~iGD~~~~Di~~a~~aG~~~i~v~~g~  227 (259)
T 2ho4_A          178 ------------------------------GKPEKTFFLEALRDADCAPEEAVMIGDDCRDDVDGAQNIGMLGILVKTGK  227 (259)
T ss_dssp             ------------------------------STTSHHHHHHHGGGGTCCGGGEEEEESCTTTTHHHHHHTTCEEEEESSTT
T ss_pred             ------------------------------cCCCHHHHHHHHHHcCCChHHEEEECCCcHHHHHHHHHCCCcEEEECCCC
Confidence                                          79999999999999999999999999999 99999999999999997763


Q ss_pred             C--------CCCCCEEeCCHHHHHHHhHHh
Q 022360          254 R--------VKGADYAFESIHNIKEAIPEL  275 (298)
Q Consensus       254 ~--------~~~ad~i~~s~~~l~~~l~~~  275 (298)
                      .        ...++++++++.++.+.|.+-
T Consensus       228 ~~~~~~~~~~~~~~~~~~~l~~l~~~l~~~  257 (259)
T 2ho4_A          228 YKAADEEKINPPPYLTCESFPHAVDHILQH  257 (259)
T ss_dssp             CCTTGGGGSSSCCSEEESCHHHHHHHHHHH
T ss_pred             CCcccccccCCCCCEEECCHHHHHHHHHHh
Confidence            1        356899999999998877653

>2c4n_A Protein NAGD; nucleotide phosphatase, HAD superfamily, UMP phosphatase, carbohydrate metabolism, hydrolase; 1.8A {Escherichia coli} SCOP: c.108.1.14

Probab=99.80  E-value=4.2e-21  Score=166.52  Aligned_cols=65  Identities=26%  Similarity=0.372  Sum_probs=58.5

Q ss_pred             CCCCHHHHHHHHHHcCCCCCcEEEEcCC-ccchHHHHHcCCeEEEecCCCC-----C---CCCCEEeCCHHHHH
Q 022360          205 CKPSELAIEKALKIASINPQRTLFFEDS-VRNIQAGKRVGLDTVLIGKSQR-----V---KGADYAFESIHNIK  269 (298)
Q Consensus       205 ~kp~~~~~~~~l~~l~i~p~~~i~iGDs-~~Di~~a~~aG~~~v~v~~~~~-----~---~~ad~i~~s~~~l~  269 (298)
                      +|||+.+++.+++++|++|++|++|||+ .||++|++.+|+.++++.++..     +   ..|+++++++.+|.
T Consensus       175 ~kpk~~~~~~~~~~lgi~~~~~i~iGD~~~nDi~~~~~aG~~~~~v~~g~~~~~~~~~~~~~~~~v~~~~~el~  248 (250)
T 2c4n_A          175 GKPSPWIIRAALNKMQAHSEETVIVGDNLRTDILAGFQAGLETILVLSGVSSLDDIDSMPFRPSWIYPSVAEID  248 (250)
T ss_dssp             STTSTHHHHHHHHHHTCCGGGEEEEESCTTTHHHHHHHTTCEEEEESSSSCCGGGGSSCSSCCSEEESSGGGCC
T ss_pred             CCCCHHHHHHHHHHcCCCcceEEEECCCchhHHHHHHHcCCeEEEECCCCCChhhhhhcCCCCCEEECCHHHhh
Confidence            6999999999999999999999999999 6999999999999999977642     1   47999999988863

>4eze_A Haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 2.27A {Salmonella enterica subsp}

Probab=99.79  E-value=6.5e-20  Score=168.76  Aligned_cols=200  Identities=10%  Similarity=0.116  Sum_probs=129.3

Q ss_pred             ccCccEEEEeCCCCccCCCccHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHhCC-CHHHH----HHccCCCChhhH
Q 022360           11 AAKYDCLLFDLDDTLYPYSSGIAAACGQNIKDYMVEKLGIERSKIEDLGNLLYKNYGT-TMAGL----RAIGYDFDYDDY   85 (298)
Q Consensus        11 ~~~~k~viFDlDGTL~d~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~-~~~~~----~~~~~~~~~~~~   85 (298)
                      ..++|+|+|||||||+++...     .     .+.+..|+..... .......  .|. .....    .........+.+
T Consensus       105 ~~~~kaviFDlDGTLid~~~~-----~-----~la~~~g~~~~~~-~~~~~~~--~g~~~~~~~l~~~~~~l~~~~~~~i  171 (317)
T 4eze_A          105 LPANGIIAFDMDSTFIAEEGV-----D-----EIARELGMSTQIT-AITQQAM--EGKLDFNASFTRRIGMLKGTPKAVL  171 (317)
T ss_dssp             CCCSCEEEECTBTTTBSSCHH-----H-----HHHHHTTCHHHHH-HHHHHHH--TTSSCHHHHHHHHHHTTTTCBHHHH
T ss_pred             CCCCCEEEEcCCCCccCCccH-----H-----HHHHHhCCcHHHH-HHHHHHh--cCCCCHHHHHHHHHHHhcCCCHHHH
Confidence            356799999999999996532     1     1344455533221 1111110  111 11111    111112223333


Q ss_pred             HHHhhcccCCCCCCCChhHHHHHHhC---CCcEEEEeCCChHHHHHHHHHhCCCCccceeEeecCCCCCCCCCCCCChhh
Q 022360           86 HSFVHGRLPYENLKPDPVLRSLLLSL---PLRKIIFTNADKVHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSDDEDD  162 (298)
Q Consensus        86 ~~~~~~~~~~~~~~~~~g~~~~L~~l---~~~~~ivS~~~~~~~~~~l~~l~l~~~f~~i~~~~~~~~~~~~~~~~~~~~  162 (298)
                      .....      ...++||+.++|+.|   +++++|+|++....++..++++|+..+|+.++..++...            
T Consensus       172 ~~~~~------~~~l~pg~~e~L~~Lk~~G~~v~IvSn~~~~~~~~~l~~lgl~~~f~~~l~~~dg~~------------  233 (317)
T 4eze_A          172 NAVCD------RMTLSPGLLTILPVIKAKGFKTAIISGGLDIFTQRLKARYQLDYAFSNTVEIRDNVL------------  233 (317)
T ss_dssp             HHHHH------TCCBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCSEEEEECEEEETTEE------------
T ss_pred             HHHHh------CCEECcCHHHHHHHHHhCCCEEEEEeCccHHHHHHHHHHcCCCeEEEEEEEeeCCee------------
Confidence            33332      257889999998877   488999999999999999999999999998887654211            


Q ss_pred             HHHHHhhhcccCCCCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHHc
Q 022360          163 IAFVESAASTTTSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRV  242 (298)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a~~a  242 (298)
                                            .|....+.          ..+|||+..+..+++++|++|++|++|||+.+|+.+|+.+
T Consensus       234 ----------------------tg~i~~~~----------~~~kpkp~~~~~~~~~lgv~~~~~i~VGDs~~Di~aa~~A  281 (317)
T 4eze_A          234 ----------------------TDNITLPI----------MNAANKKQTLVDLAARLNIATENIIACGDGANDLPMLEHA  281 (317)
T ss_dssp             ----------------------EEEECSSC----------CCHHHHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHS
T ss_pred             ----------------------eeeEeccc----------CCCCCCHHHHHHHHHHcCCCcceEEEEeCCHHHHHHHHHC
Confidence                                  00000000          0159999999999999999999999999999999999999


Q ss_pred             CCeEEEecCCCCCCCCCEEeC--CHHHHHHHhH
Q 022360          243 GLDTVLIGKSQRVKGADYAFE--SIHNIKEAIP  273 (298)
Q Consensus       243 G~~~v~v~~~~~~~~ad~i~~--s~~~l~~~l~  273 (298)
                      |+.+++.+....+..++.++.  ++.+|.++|+
T Consensus       282 G~~va~~~~~~~~~~a~~~i~~~~L~~ll~~L~  314 (317)
T 4eze_A          282 GTGIAWKAKPVVREKIHHQINYHGFELLLFLIE  314 (317)
T ss_dssp             SEEEEESCCHHHHHHCCEEESSSCGGGGGGGTC
T ss_pred             CCeEEeCCCHHHHHhcCeeeCCCCHHHHHHHHH
Confidence            998888332333455666654  6666655543

>4ap9_A Phosphoserine phosphatase; hydrolase, haloacid dehalogenase superfamily, NDSB; HET: 1PS; 1.78A {Thermococcus onnurineus} PDB: 4b6j_A

Probab=99.79  E-value=2.1e-19  Score=151.08  Aligned_cols=121  Identities=16%  Similarity=0.121  Sum_probs=92.7

Q ss_pred             CCCCChhHHHHHHhCC---CcEEEEeCCChHHHHHHHHHhCCCCccceeEeecCCCCCCCCCCCCChhhHHHHHhhhccc
Q 022360           97 NLKPDPVLRSLLLSLP---LRKIIFTNADKVHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSDDEDDIAFVESAASTT  173 (298)
Q Consensus        97 ~~~~~~g~~~~L~~l~---~~~~ivS~~~~~~~~~~l~~l~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  173 (298)
                      ...+.|++.++|+.++   .+++++|++....++.. +.+++..+++.+...++...                       
T Consensus        77 ~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~-----------------------  132 (201)
T 4ap9_A           77 KVNVSPEARELVETLREKGFKVVLISGSFEEVLEPF-KELGDEFMANRAIFEDGKFQ-----------------------  132 (201)
T ss_dssp             GCCCCHHHHHHHHHHHHTTCEEEEEEEEETTTSGGG-TTTSSEEEEEEEEEETTEEE-----------------------
T ss_pred             hCCCChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHH-HHcCchhheeeEEeeCCceE-----------------------
Confidence            4588999999988874   78999999988888888 99999877665555442211                       


Q ss_pred             CCCCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHHcCCeEEEecCCC
Q 022360          174 TSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTVLIGKSQ  253 (298)
Q Consensus       174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a~~aG~~~v~v~~~~  253 (298)
                                  +                  .+|.+.....+++++  +|++|++|||+.||++|++.+|+++++.+...
T Consensus       133 ------------~------------------~~~~~~~k~~~l~~l--~~~~~i~iGD~~~Di~~~~~ag~~v~~~~~~~  180 (201)
T 4ap9_A          133 ------------G------------------IRLRFRDKGEFLKRF--RDGFILAMGDGYADAKMFERADMGIAVGREIP  180 (201)
T ss_dssp             ------------E------------------EECCSSCHHHHHGGG--TTSCEEEEECTTCCHHHHHHCSEEEEESSCCT
T ss_pred             ------------C------------------CcCCccCHHHHHHhc--CcCcEEEEeCCHHHHHHHHhCCceEEECCCCc
Confidence                        0                  133333355566666  89999999999999999999999865544433


Q ss_pred             CCCCCCEEeCCHHHHHHHhHHhh
Q 022360          254 RVKGADYAFESIHNIKEAIPELW  276 (298)
Q Consensus       254 ~~~~ad~i~~s~~~l~~~l~~~~  276 (298)
                         .|++++.++++|.++|+++.
T Consensus       181 ---~ad~v~~~~~el~~~l~~l~  200 (201)
T 4ap9_A          181 ---GADLLVKDLKELVDFIKNLK  200 (201)
T ss_dssp             ---TCSEEESSHHHHHHHHHTCC
T ss_pred             ---cccEEEccHHHHHHHHHHhh
Confidence               99999999999999988763

>3p96_A Phosphoserine phosphatase SERB; ssgcid, structural genomics, structural genomics center for infectious disease, hydrolas; 2.05A {Mycobacterium avium}

Probab=99.77  E-value=5.3e-19  Score=168.00  Aligned_cols=202  Identities=15%  Similarity=0.101  Sum_probs=130.1

Q ss_pred             ccccCccEEEEeCCCCccCCCccHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHhCCCHHH-H---HHccCCCChhh
Q 022360            9 MAAAKYDCLLFDLDDTLYPYSSGIAAACGQNIKDYMVEKLGIERSKIEDLGNLLYKNYGTTMAG-L---RAIGYDFDYDD   84 (298)
Q Consensus         9 ~~~~~~k~viFDlDGTL~d~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~-~---~~~~~~~~~~~   84 (298)
                      +...++|+|+|||||||+++.. +         .++.+..|...... .+...... ....+.. +   .......+.+.
T Consensus       180 ~~~~~~k~viFD~DgTLi~~~~-~---------~~la~~~g~~~~~~-~~~~~~~~-g~~~~~~~~~~~~~~l~~~~~~~  247 (415)
T 3p96_A          180 LERRAKRLIVFDVDSTLVQGEV-I---------EMLAAKAGAEGQVA-AITDAAMR-GELDFAQSLQQRVATLAGLPATV  247 (415)
T ss_dssp             TTTTCCCEEEECTBTTTBSSCH-H---------HHHHHHTTCHHHHH-HHHHHHHT-TCSCHHHHHHHHHHTTTTCBTHH
T ss_pred             ccccCCcEEEEcCcccCcCCch-H---------HHHHHHcCCcHHHH-HHHHHHhc-CCcCHHHHHHHHHHHhcCCCHHH
Confidence            3455689999999999999652 1         12444455532221 11111110 0111111 1   01111222333


Q ss_pred             HHHHhhcccCCCCCCCChhHHHHHHhC---CCcEEEEeCCChHHHHHHHHHhCCCCccceeEeecCCCCCCCCCCCCChh
Q 022360           85 YHSFVHGRLPYENLKPDPVLRSLLLSL---PLRKIIFTNADKVHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSDDED  161 (298)
Q Consensus        85 ~~~~~~~~~~~~~~~~~~g~~~~L~~l---~~~~~ivS~~~~~~~~~~l~~l~l~~~f~~i~~~~~~~~~~~~~~~~~~~  161 (298)
                      +.....      .+.++||+.++|+.|   +++++|+|++....++..++++|+..+|+..+...+...           
T Consensus       248 ~~~~~~------~~~~~pg~~e~l~~Lk~~G~~~~ivS~~~~~~~~~~~~~lgl~~~~~~~l~~~dg~~-----------  310 (415)
T 3p96_A          248 IDEVAG------QLELMPGARTTLRTLRRLGYACGVVSGGFRRIIEPLAEELMLDYVAANELEIVDGTL-----------  310 (415)
T ss_dssp             HHHHHH------HCCBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCSEEEEECEEEETTEE-----------
T ss_pred             HHHHHH------hCccCccHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHcCccceeeeeEEEeCCEE-----------
Confidence            333322      257889999998887   478999999999999999999999888876654432110           


Q ss_pred             hHHHHHhhhcccCCCCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHH
Q 022360          162 DIAFVESAASTTTSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKR  241 (298)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a~~  241 (298)
                                             .+...+...          .+|||+..+..+++++|++|++|++|||+.||+.|++.
T Consensus       311 -----------------------tg~~~~~v~----------~~kpk~~~~~~~~~~~gi~~~~~i~vGD~~~Di~~a~~  357 (415)
T 3p96_A          311 -----------------------TGRVVGPII----------DRAGKATALREFAQRAGVPMAQTVAVGDGANDIDMLAA  357 (415)
T ss_dssp             -----------------------EEEECSSCC----------CHHHHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHH
T ss_pred             -----------------------EeeEccCCC----------CCcchHHHHHHHHHHcCcChhhEEEEECCHHHHHHHHH
Confidence                                   000000000          16999999999999999999999999999999999999


Q ss_pred             cCCeEEEecCCCCCCCCCEEeC--CHHHHHHHh
Q 022360          242 VGLDTVLIGKSQRVKGADYAFE--SIHNIKEAI  272 (298)
Q Consensus       242 aG~~~v~v~~~~~~~~ad~i~~--s~~~l~~~l  272 (298)
                      +|+.+++.+.+..+..+++++.  ++.+|..+|
T Consensus       358 aG~~va~~~~~~~~~~ad~~i~~~~l~~ll~~l  390 (415)
T 3p96_A          358 AGLGIAFNAKPALREVADASLSHPYLDTVLFLL  390 (415)
T ss_dssp             SSEEEEESCCHHHHHHCSEEECSSCTTHHHHHT
T ss_pred             CCCeEEECCCHHHHHhCCEEEccCCHHHHHHHh
Confidence            9999988433334677888866  566666554

>1yv9_A Hydrolase, haloacid dehalogenase family; hypothetical protein, struc genomics, PSI, protein structure initiative; 2.80A {Enterococcus faecalis} SCOP: c.108.1.14

Probab=99.76  E-value=8e-20  Score=162.12  Aligned_cols=118  Identities=17%  Similarity=0.187  Sum_probs=87.6

Q ss_pred             CCCCChhHHHHHHhCC--CcEEEEeCCChHH--HHH-HHHHhCCCCccceeEeecCCCCCCCCCCCCChhhHHHHHhhhc
Q 022360           97 NLKPDPVLRSLLLSLP--LRKIIFTNADKVH--AVK-VLSRLGLEDCFEGIICFETLNPTHKNTVSDDEDDIAFVESAAS  171 (298)
Q Consensus        97 ~~~~~~g~~~~L~~l~--~~~~ivS~~~~~~--~~~-~l~~l~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  171 (298)
                      ...++|++.++|+.|+  .++ |+||.+...  ... .....++..+|+.++++++.+.                     
T Consensus       124 ~~~~~~~~~~~l~~l~~g~~~-i~tn~~~~~~~~~~~~~~~~~l~~~f~~~~~~~~~~~---------------------  181 (264)
T 1yv9_A          124 TELSYEKVVLATLAIQKGALF-IGTNPDKNIPTERGLLPGAGSVVTFVETATQTKPVYI---------------------  181 (264)
T ss_dssp             TTCCHHHHHHHHHHHHTTCEE-EESCCCSEEEETTEEEECHHHHHHHHHHHHTCCCEEC---------------------
T ss_pred             CCcCHHHHHHHHHHHhCCCEE-EEECCCCcccCCCCcccCCcHHHHHHHHHhCCCcccc---------------------
Confidence            3456788888877764  444 778776532  111 1223335556776666554433                     


Q ss_pred             ccCCCCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCC-ccchHHHHHcCCeEEEec
Q 022360          172 TTTSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDS-VRNIQAGKRVGLDTVLIG  250 (298)
Q Consensus       172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~p~~~i~iGDs-~~Di~~a~~aG~~~v~v~  250 (298)
                                                       +||+|.+|+.+++++|++|++|++|||+ .+|+.+|+++|+.++++.
T Consensus       182 ---------------------------------~KP~p~~~~~~~~~~~~~~~~~~~vGD~~~~Di~~a~~aG~~~i~v~  228 (264)
T 1yv9_A          182 ---------------------------------GKPKAIIMERAIAHLGVEKEQVIMVGDNYETDIQSGIQNGIDSLLVT  228 (264)
T ss_dssp             ---------------------------------STTSHHHHHHHHHHHCSCGGGEEEEESCTTTHHHHHHHHTCEEEEET
T ss_pred             ---------------------------------CCCCHHHHHHHHHHcCCCHHHEEEECCCcHHHHHHHHHcCCcEEEEC
Confidence                                             7999999999999999999999999999 599999999999999997


Q ss_pred             CCCC-----CC---CCCEEeCCHHHHH
Q 022360          251 KSQR-----VK---GADYAFESIHNIK  269 (298)
Q Consensus       251 ~~~~-----~~---~ad~i~~s~~~l~  269 (298)
                      ++..     ..   .||++++++.++.
T Consensus       229 ~g~~~~~~l~~~~~~~d~v~~~l~el~  255 (264)
T 1yv9_A          229 SGFTPKSAVPTLPTPPTYVVDSLDEWT  255 (264)
T ss_dssp             TSSSCSSSTTTCSSCCSEEESSGGGCC
T ss_pred             CCCCCHHHHHhcCCCCCEEEecHHHHh
Confidence            7653     11   6999999988753

>3kd3_A Phosphoserine phosphohydrolase-like protein; csgid, niaid, S genomics, national institute of allergy and infectious DISE (niaid); 1.70A {Francisella tularensis subsp}

Probab=99.76  E-value=5.2e-18  Score=144.01  Aligned_cols=126  Identities=11%  Similarity=0.085  Sum_probs=90.8

Q ss_pred             CCCChhHHHHHHhC---CCcEEEEeCCChHHHHHHHHHhCCC--CccceeEeecCCCCCCCCCCCCChhhHHHHHhhhcc
Q 022360           98 LKPDPVLRSLLLSL---PLRKIIFTNADKVHAVKVLSRLGLE--DCFEGIICFETLNPTHKNTVSDDEDDIAFVESAAST  172 (298)
Q Consensus        98 ~~~~~g~~~~L~~l---~~~~~ivS~~~~~~~~~~l~~l~l~--~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  172 (298)
                      ..++|++.++|+.+   +.+++++|++....++..++.+++.  .+|...+.....+.+                     
T Consensus        81 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------------  139 (219)
T 3kd3_A           81 NLLTDGIKELVQDLKNKGFEIWIFSGGLSESIQPFADYLNIPRENIFAVETIWNSDGSF---------------------  139 (219)
T ss_dssp             TTBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCCGGGEEEEEEEECTTSBE---------------------
T ss_pred             ccCChhHHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHcCCCcccEEEeeeeecCCCce---------------------
Confidence            34778998888876   4789999999999999999999984  456543333221110                     


Q ss_pred             cCCCCCCchhhhccccCCCCCCcccCCCCCCCCCCCH-HHHHHHHHHcCCCCCcEEEEcCCccchHHHHHcCCeEEEecC
Q 022360          173 TTSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSE-LAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTVLIGK  251 (298)
Q Consensus       173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~-~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a~~aG~~~v~v~~  251 (298)
                               ..+             .     ..+|++ ..+..+++.+|++|++|++|||+.||++|+ ++|+.+++++.
T Consensus       140 ---------~~~-------------~-----~~~~~~~~~~~~l~~~~~~~~~~~~~vGD~~~Di~~~-~~G~~~~~v~~  191 (219)
T 3kd3_A          140 ---------KEL-------------D-----NSNGACDSKLSAFDKAKGLIDGEVIAIGDGYTDYQLY-EKGYATKFIAY  191 (219)
T ss_dssp             ---------EEE-------------E-----CTTSTTTCHHHHHHHHGGGCCSEEEEEESSHHHHHHH-HHTSCSEEEEE
T ss_pred             ---------ecc-------------C-----CCCCCcccHHHHHHHHhCCCCCCEEEEECCHhHHHHH-hCCCCcEEEec
Confidence                     000             0     034444 345556667799999999999999999998 58998777644


Q ss_pred             CCC------CCCCCEEeCCHHHHHHHh
Q 022360          252 SQR------VKGADYAFESIHNIKEAI  272 (298)
Q Consensus       252 ~~~------~~~ad~i~~s~~~l~~~l  272 (298)
                      +..      +..|+++++++.+|.++|
T Consensus       192 ~~~~~~~~~~~~ad~v~~~~~el~~~l  218 (219)
T 3kd3_A          192 MEHIEREKVINLSKYVARNVAELASLI  218 (219)
T ss_dssp             CSSCCCHHHHHHCSEEESSHHHHHHHH
T ss_pred             cCccccHHHHhhcceeeCCHHHHHHhh
Confidence            321      456999999999998765

>2fea_A 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; 2633731, structural genomics, joint center for structural GE JCSG; HET: MSE; 2.00A {Bacillus subtilis} SCOP: c.108.1.20

Probab=99.75  E-value=5.9e-19  Score=154.43  Aligned_cols=130  Identities=13%  Similarity=0.106  Sum_probs=98.1

Q ss_pred             CCCCChhHHHHHHhCC---CcEEEEeCCChHHHHHHHHHhCCCCccceeEeecCCCCCCCCCCCCChhhHHHHHhhhccc
Q 022360           97 NLKPDPVLRSLLLSLP---LRKIIFTNADKVHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSDDEDDIAFVESAASTT  173 (298)
Q Consensus        97 ~~~~~~g~~~~L~~l~---~~~~ivS~~~~~~~~~~l~~l~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  173 (298)
                      ...++||+.++|+.|+   ++++|+|++....++..++  ++.++ +.+++++....-++                    
T Consensus        75 ~~~~~pg~~~~l~~L~~~g~~~~ivS~~~~~~~~~~l~--~l~~~-~~v~~~~~~~~~~~--------------------  131 (236)
T 2fea_A           75 DAKIREGFREFVAFINEHEIPFYVISGGMDFFVYPLLE--GIVEK-DRIYCNHASFDNDY--------------------  131 (236)
T ss_dssp             HCCBCTTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHHT--TTSCG-GGEEEEEEECSSSB--------------------
T ss_pred             CCCCCccHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHh--cCCCC-CeEEeeeeEEcCCc--------------------
Confidence            3678999999999884   7899999999998988888  77666 88888765431000                    


Q ss_pred             CCCCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHH-HH-------HHHHHcCCCCCcEEEEcCCccchHHHHHcCCe
Q 022360          174 TSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELA-IE-------KALKIASINPQRTLFFEDSVRNIQAGKRVGLD  245 (298)
Q Consensus       174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~-~~-------~~l~~l~i~p~~~i~iGDs~~Di~~a~~aG~~  245 (298)
                                +.+.                ..||+|.. +.       .++++++++|++|++|||+.+|+.+|+++|+.
T Consensus       132 ----------~~~~----------------~~kp~p~~~~~~~~~~K~~~~~~~~~~~~~~~~vGDs~~Di~~a~~aG~~  185 (236)
T 2fea_A          132 ----------IHID----------------WPHSCKGTCSNQCGCCKPSVIHELSEPNQYIIMIGDSVTDVEAAKLSDLC  185 (236)
T ss_dssp             ----------CEEE----------------CTTCCCTTCCSCCSSCHHHHHHHHCCTTCEEEEEECCGGGHHHHHTCSEE
T ss_pred             ----------eEEe----------------cCCCCccccccccCCcHHHHHHHHhccCCeEEEEeCChHHHHHHHhCCee
Confidence                      0000                03677663 43       78899999999999999999999999999999


Q ss_pred             EEEecCCCC--CC-CCCEEeCCHHHHHHHhHHh
Q 022360          246 TVLIGKSQR--VK-GADYAFESIHNIKEAIPEL  275 (298)
Q Consensus       246 ~v~v~~~~~--~~-~ad~i~~s~~~l~~~l~~~  275 (298)
                      ++.......  .. .+++++.++.+|.+.|.++
T Consensus       186 ~~~~~~~~~~~~~~~~~~~~~~~~el~~~l~~~  218 (236)
T 2fea_A          186 FARDYLLNECREQNLNHLPYQDFYEIRKEIENV  218 (236)
T ss_dssp             EECHHHHHHHHHTTCCEECCSSHHHHHHHHHTS
T ss_pred             eechHHHHHHHHCCCCeeecCCHHHHHHHHHHh
Confidence            874211111  23 3899999999999988876

>1vjr_A 4-nitrophenylphosphatase; TM1742, structural genomics, JCSG, protein structure initiative, joint center for structural G hydrolase; 2.40A {Thermotoga maritima} SCOP: c.108.1.14 PDB: 1pw5_A*

Probab=99.75  E-value=1e-19  Score=161.92  Aligned_cols=68  Identities=18%  Similarity=0.424  Sum_probs=62.0

Q ss_pred             CCCCHHHHHHHHHHcCCCCCcEEEEcCCc-cchHHHHHcCCeEEEecCCCCC--------CCCCEEeCCHHHHHHHh
Q 022360          205 CKPSELAIEKALKIASINPQRTLFFEDSV-RNIQAGKRVGLDTVLIGKSQRV--------KGADYAFESIHNIKEAI  272 (298)
Q Consensus       205 ~kp~~~~~~~~l~~l~i~p~~~i~iGDs~-~Di~~a~~aG~~~v~v~~~~~~--------~~ad~i~~s~~~l~~~l  272 (298)
                      +||++.+++.+++++|++|++|++|||+. ||++||+.+|+.++++.++...        ..++++++++.+|.++|
T Consensus       194 ~kpk~~~~~~~~~~lgi~~~e~i~iGD~~~nDi~~a~~aG~~~i~v~~g~~~~~~~~~~~~~~~~~i~~l~el~~~l  270 (271)
T 1vjr_A          194 GKPNPLVVDVISEKFGVPKERMAMVGDRLYTDVKLGKNAGIVSILVLTGETTPEDLERAETKPDFVFKNLGELAKAV  270 (271)
T ss_dssp             STTSTHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHHHHTCEEEEESSSSCCHHHHHHCSSCCSEEESSHHHHHHHH
T ss_pred             CCCCHHHHHHHHHHhCCCCceEEEECCCcHHHHHHHHHcCCeEEEECCCCCCHHHHhhcCCCCCEEECCHHHHHHHh
Confidence            79999999999999999999999999995 9999999999999999887531        37999999999998765

>3i28_A Epoxide hydrolase 2; aromatic hydrocarbons catabolism, detoxification, magnesium, metal-binding, peroxisome; HET: 34N; 1.95A {Homo sapiens} PDB: 1s8o_A* 1zd2_P* 1vj5_A* 1zd4_A* 1zd5_A* 3i1y_A* 1zd3_A* 3koo_A* 3otq_A* 4hai_A* 1cqz_A 1cr6_A* 1ek1_A* 1ek2_A* 3ans_A* 3ant_A* 3pdc_A*

Probab=99.75  E-value=1.1e-18  Score=167.62  Aligned_cols=101  Identities=22%  Similarity=0.291  Sum_probs=85.1

Q ss_pred             CCCChhHHHHHHhCC---CcEEEEeCC--ChHHHHHHHHHh--CCCCccceeEeecCCCCCCCCCCCCChhhHHHHHhhh
Q 022360           98 LKPDPVLRSLLLSLP---LRKIIFTNA--DKVHAVKVLSRL--GLEDCFEGIICFETLNPTHKNTVSDDEDDIAFVESAA  170 (298)
Q Consensus        98 ~~~~~g~~~~L~~l~---~~~~ivS~~--~~~~~~~~l~~l--~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~  170 (298)
                      ..++||+.++|+.|+   ++++|+||+  ........+...  ++..+|+.++++++++.                    
T Consensus        99 ~~~~~~~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~~~~~~~~~~l~~~fd~i~~~~~~~~--------------------  158 (555)
T 3i28_A           99 RKINRPMLQAALMLRKKGFTTAILTNTWLDDRAERDGLAQLMCELKMHFDFLIESCQVGM--------------------  158 (555)
T ss_dssp             CEECHHHHHHHHHHHHTTCEEEEEECCCCCCSTTHHHHHHHHHHHHTTSSEEEEHHHHTC--------------------
T ss_pred             cCcChhHHHHHHHHHHCCCEEEEEeCCCccccchhhHHHHHhhhhhhheeEEEeccccCC--------------------
Confidence            578899999988874   889999998  222223333333  77789999999998875                    


Q ss_pred             cccCCCCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHHcCCeEEEec
Q 022360          171 STTTSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTVLIG  250 (298)
Q Consensus       171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a~~aG~~~v~v~  250 (298)
                                                        +||+|++|..+++++|++|++|++|||+.+|+++|+++|+.++++.
T Consensus       159 ----------------------------------~KP~p~~~~~~~~~lg~~p~~~~~v~D~~~di~~a~~aG~~~~~~~  204 (555)
T 3i28_A          159 ----------------------------------VKPEPQIYKFLLDTLKASPSEVVFLDDIGANLKPARDLGMVTILVQ  204 (555)
T ss_dssp             ----------------------------------CTTCHHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHHHTCEEEECS
T ss_pred             ----------------------------------CCCCHHHHHHHHHHcCCChhHEEEECCcHHHHHHHHHcCCEEEEEC
Confidence                                              7999999999999999999999999999999999999999999776


Q ss_pred             CC
Q 022360          251 KS  252 (298)
Q Consensus       251 ~~  252 (298)
                      .+
T Consensus       205 ~~  206 (555)
T 3i28_A          205 DT  206 (555)
T ss_dssp             SH
T ss_pred             CC
Confidence            54

>2o2x_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; 1.50A {Mesorhizobium loti} SCOP: c.108.1.19

Probab=99.74  E-value=1.1e-18  Score=151.23  Aligned_cols=134  Identities=18%  Similarity=0.201  Sum_probs=102.7

Q ss_pred             CCCChhHHHHHHhCC---CcEEEEeCCCh---------------HHHHHHHHHhCCCCccceeEeecCC--CCCCCCCCC
Q 022360           98 LKPDPVLRSLLLSLP---LRKIIFTNADK---------------VHAVKVLSRLGLEDCFEGIICFETL--NPTHKNTVS  157 (298)
Q Consensus        98 ~~~~~g~~~~L~~l~---~~~~ivS~~~~---------------~~~~~~l~~l~l~~~f~~i~~~~~~--~~~~~~~~~  157 (298)
                      ..++||+.++|+.|+   ++++|+||+..               ..++..++.+|+.  |+.++.+...  +.+      
T Consensus        55 ~~~~~g~~e~L~~L~~~G~~~~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~--~~~~~~~~~~~~g~~------  126 (218)
T 2o2x_A           55 IVLRPQMLPAIATANRAGIPVVVVTNQSGIARGYFGWSAFAAVNGRVLELLREEGVF--VDMVLACAYHEAGVG------  126 (218)
T ss_dssp             CCBCGGGHHHHHHHHHHTCCEEEEEECHHHHTTSCCHHHHHHHHHHHHHHHHHTTCC--CSEEEEECCCTTCCS------
T ss_pred             CeECcCHHHHHHHHHHCCCEEEEEcCcCCCCcccccHHHHHHHHHHHHHHHHHcCCc--eeeEEEeecCCCCce------
Confidence            467889999888874   88999999987               6788889999875  5554433210  000      


Q ss_pred             CChhhHHHHHhhhcccCCCCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccchH
Q 022360          158 DDEDDIAFVESAASTTTSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQ  237 (298)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~  237 (298)
                                    . ...+             .      .    ..+||+|.+++.+++++|++|++|++|||+.+|+.
T Consensus       127 --------------~-~~~~-------------~------~----~~~KP~~~~~~~~~~~~~i~~~~~~~VGD~~~Di~  168 (218)
T 2o2x_A          127 --------------P-LAIP-------------D------H----PMRKPNPGMLVEAGKRLALDLQRSLIVGDKLADMQ  168 (218)
T ss_dssp             --------------T-TCCS-------------S------C----TTSTTSCHHHHHHHHHHTCCGGGCEEEESSHHHHH
T ss_pred             --------------e-eccc-------------C------C----ccCCCCHHHHHHHHHHcCCCHHHEEEEeCCHHHHH
Confidence                          0 0000             0      0    02799999999999999999999999999999999


Q ss_pred             HHHHcCCeE-EEecCCCC-----CCCCCEEeCCHHHHHHHhHHhhc
Q 022360          238 AGKRVGLDT-VLIGKSQR-----VKGADYAFESIHNIKEAIPELWE  277 (298)
Q Consensus       238 ~a~~aG~~~-v~v~~~~~-----~~~ad~i~~s~~~l~~~l~~~~~  277 (298)
                      +|+++|+.+ +++.++..     ...++++++++.+|.+.|.++..
T Consensus       169 ~a~~aG~~~~i~v~~g~~~~~~~~~~~~~~i~~l~el~~~l~~~~~  214 (218)
T 2o2x_A          169 AGKRAGLAQGWLVDGEAAVQPGFAIRPLRDSSELGDLLAAIETLGR  214 (218)
T ss_dssp             HHHHTTCSEEEEETCCCEEETTEEEEEESSHHHHHHHHHHHHHTCC
T ss_pred             HHHHCCCCEeEEEecCCCCcccccCCCCEecccHHHHHHHHHHHhc
Confidence            999999999 99987653     24678899999999998887643

>3fvv_A Uncharacterized protein; unknown function, structural genomics, PSI,MCSG, protein STR initiative, midwest center for structural genomics; 2.10A {Bordetella pertussis}

Probab=99.74  E-value=2.6e-17  Score=142.48  Aligned_cols=106  Identities=9%  Similarity=0.038  Sum_probs=83.5

Q ss_pred             CCChhHHHHHHhC---CCcEEEEeCCChHHHHHHHHHhCCCCccceeEeecCCCCCCCCCCCCChhhHHHHHhhhcccCC
Q 022360           99 KPDPVLRSLLLSL---PLRKIIFTNADKVHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSDDEDDIAFVESAASTTTS  175 (298)
Q Consensus        99 ~~~~g~~~~L~~l---~~~~~ivS~~~~~~~~~~l~~l~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  175 (298)
                      .++||+.++|+.|   +++++|+|++....++..++++|+..+|...+...+...                         
T Consensus        92 ~~~~g~~~~l~~l~~~g~~~~ivS~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~-------------------------  146 (232)
T 3fvv_A           92 SLTVQAVDVVRGHLAAGDLCALVTATNSFVTAPIARAFGVQHLIATDPEYRDGRY-------------------------  146 (232)
T ss_dssp             GCCHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCCEEEECEEEEETTEE-------------------------
T ss_pred             hcCHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCCEEEEcceEEECCEE-------------------------
Confidence            5689999999887   478999999999999999999999877766655432110                         


Q ss_pred             CCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcC---CCCCcEEEEcCCccchHHHHHcCCeEEE
Q 022360          176 ANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIAS---INPQRTLFFEDSVRNIQAGKRVGLDTVL  248 (298)
Q Consensus       176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~---i~p~~~i~iGDs~~Di~~a~~aG~~~v~  248 (298)
                               .+....+          +..+++|+..+..+++++|   ++|++|++||||.+|+.+++.+|+.+++
T Consensus       147 ---------~g~~~~~----------~~~~~~K~~~~~~~~~~~~~~~~~~~~~~~vGDs~~D~~~~~~ag~~~~~  203 (232)
T 3fvv_A          147 ---------TGRIEGT----------PSFREGKVVRVNQWLAGMGLALGDFAESYFYSDSVNDVPLLEAVTRPIAA  203 (232)
T ss_dssp             ---------EEEEESS----------CSSTHHHHHHHHHHHHHTTCCGGGSSEEEEEECCGGGHHHHHHSSEEEEE
T ss_pred             ---------eeeecCC----------CCcchHHHHHHHHHHHHcCCCcCchhheEEEeCCHhhHHHHHhCCCeEEE
Confidence                     0000000          0125788899999999999   9999999999999999999999988875

>4dw8_A Haloacid dehalogenase-like hydrolase; HAD, putative phosphatase, enzyme function initiative, EFI, structural genomics; 1.50A {Bacteroides thetaiotaomicron} PDB: 3niw_A 4dwo_A

Probab=99.74  E-value=1.7e-18  Score=154.74  Aligned_cols=73  Identities=16%  Similarity=0.233  Sum_probs=63.4

Q ss_pred             CCCCHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHHcCCeEEEecCCC-CCCCCCEEeCCHHH--HHHHhHHhhc
Q 022360          205 CKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTVLIGKSQ-RVKGADYAFESIHN--IKEAIPELWE  277 (298)
Q Consensus       205 ~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a~~aG~~~v~v~~~~-~~~~ad~i~~s~~~--l~~~l~~~~~  277 (298)
                      +.+|+.+++.+++++|+++++|++|||+.||++|++.+|++++|.+... .+..|++++.+.++  +.++|++++.
T Consensus       195 ~~~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~vam~na~~~~k~~A~~v~~~~~e~Gv~~~i~~~~~  270 (279)
T 4dw8_A          195 GIDKALSLSVLLENIGMTREEVIAIGDGYNDLSMIKFAGMGVAMGNAQEPVKKAADYITLTNDEDGVAEAIERIFN  270 (279)
T ss_dssp             TCCHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHHHCSEECCCGGGTHHHHHHHHHC-
T ss_pred             CCChHHHHHHHHHHcCCCHHHEEEECCChhhHHHHHHcCcEEEcCCCcHHHHHhCCEEcCCCCCcHHHHHHHHHHh
Confidence            5889999999999999999999999999999999999998888764433 37779999999876  8888888764

>2x4d_A HLHPP, phospholysine phosphohistidine inorganic pyrophos phosphatase; hydrolase; 1.92A {Homo sapiens}

Probab=99.72  E-value=6.6e-19  Score=155.09  Aligned_cols=72  Identities=14%  Similarity=0.250  Sum_probs=64.3

Q ss_pred             CCCCHHHHHHHHHHcCCCCCcEEEEcCCc-cchHHHHHcCCeEEEecCCCC--------CCCCCEEeCCHHHHHHHhHHh
Q 022360          205 CKPSELAIEKALKIASINPQRTLFFEDSV-RNIQAGKRVGLDTVLIGKSQR--------VKGADYAFESIHNIKEAIPEL  275 (298)
Q Consensus       205 ~kp~~~~~~~~l~~l~i~p~~~i~iGDs~-~Di~~a~~aG~~~v~v~~~~~--------~~~ad~i~~s~~~l~~~l~~~  275 (298)
                      +||++.+++.+++++|++|++|++|||+. ||+.||+.+|+.++++.++..        ...|+++++++.++.+.|.+.
T Consensus       189 ~kpk~~~~~~~~~~lgi~~~~~i~iGD~~~nDi~~a~~aG~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~~el~~~l~~~  268 (271)
T 2x4d_A          189 GKPSPEFFKSALQAIGVEAHQAVMIGDDIVGDVGGAQRCGMRALQVRTGKFRPSDEHHPEVKADGYVDNLAEAVDLLLQH  268 (271)
T ss_dssp             STTCHHHHHHHHHHHTCCGGGEEEEESCTTTTHHHHHHTTCEEEEESSTTCCGGGGGCSSCCCSEEESSHHHHHHHHHHH
T ss_pred             cCCCHHHHHHHHHHhCCCcceEEEECCCcHHHHHHHHHCCCcEEEEcCCCCCchhhcccCCCCCEEeCCHHHHHHHHHhh
Confidence            69999999999999999999999999998 999999999999999977621        245899999999998888765


Q ss_pred             h
Q 022360          276 W  276 (298)
Q Consensus       276 ~  276 (298)
                      .
T Consensus       269 ~  269 (271)
T 2x4d_A          269 A  269 (271)
T ss_dssp             C
T ss_pred             c
Confidence            3

>2pr7_A Haloacid dehalogenase/epoxide hydrolase family; NP_599989.1, uncharacterized protein, structural genomics; 1.44A {Corynebacterium glutamicum atcc 13032}

Probab=99.72  E-value=9.4e-18  Score=133.32  Aligned_cols=90  Identities=17%  Similarity=0.216  Sum_probs=81.1

Q ss_pred             HHhCCCcEEEEeCCChHHHHHHHHHhCCCCccceeEeecCCCCCCCCCCCCChhhHHHHHhhhcccCCCCCCchhhhccc
Q 022360          108 LLSLPLRKIIFTNADKVHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSDDEDDIAFVESAASTTTSANGPQIFDIIGH  187 (298)
Q Consensus       108 L~~l~~~~~ivS~~~~~~~~~~l~~l~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  187 (298)
                      |+..+++++++||+....++..++.+++..+|+.++++++.+.                                     
T Consensus        30 L~~~G~~~~i~S~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~-------------------------------------   72 (137)
T 2pr7_A           30 AKKNGVGTVILSNDPGGLGAAPIRELETNGVVDKVLLSGELGV-------------------------------------   72 (137)
T ss_dssp             HHHTTCEEEEEECSCCGGGGHHHHHHHHTTSSSEEEEHHHHSC-------------------------------------
T ss_pred             HHHCCCEEEEEeCCCHHHHHHHHHHCChHhhccEEEEeccCCC-------------------------------------
Confidence            4445688999999999989999999999999999998876654                                     


Q ss_pred             cCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHHcCCeEEEecC
Q 022360          188 FAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTVLIGK  251 (298)
Q Consensus       188 ~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a~~aG~~~v~v~~  251 (298)
                                       .||++..++.++++++++|++|++|||+.+|+.+|+++|+.++++.+
T Consensus        73 -----------------~Kp~~~~~~~~~~~~~~~~~~~~~vgD~~~di~~a~~~G~~~i~~~~  119 (137)
T 2pr7_A           73 -----------------EKPEEAAFQAAADAIDLPMRDCVLVDDSILNVRGAVEAGLVGVYYQQ  119 (137)
T ss_dssp             -----------------CTTSHHHHHHHHHHTTCCGGGEEEEESCHHHHHHHHHHTCEEEECSC
T ss_pred             -----------------CCCCHHHHHHHHHHcCCCcccEEEEcCCHHHHHHHHHCCCEEEEeCC
Confidence                             79999999999999999999999999999999999999999997654

>2wm8_A MDP-1, magnesium-dependent phosphatase 1; haloacid dehalogenase, protein phosphatase, hydrolase, magne metal-binding; 1.75A {Homo sapiens} PDB: 1u7o_A 1u7p_A

Probab=99.72  E-value=1.9e-17  Score=140.04  Aligned_cols=98  Identities=17%  Similarity=0.213  Sum_probs=88.0

Q ss_pred             CCCCChhHHHHHHhCC---CcEEEEeCCC-hHHHHHHHHHhCCCCccceeEeecCCCCCCCCCCCCChhhHHHHHhhhcc
Q 022360           97 NLKPDPVLRSLLLSLP---LRKIIFTNAD-KVHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSDDEDDIAFVESAAST  172 (298)
Q Consensus        97 ~~~~~~g~~~~L~~l~---~~~~ivS~~~-~~~~~~~l~~l~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  172 (298)
                      ...++|++.++|+.|+   ++++|+|+.. ...++..++.+++..+|+.++..                           
T Consensus        66 ~~~~~~g~~e~L~~L~~~G~~v~ivT~~~~~~~~~~~l~~~gl~~~f~~~~~~---------------------------  118 (187)
T 2wm8_A           66 DVRLYPEVPEVLKRLQSLGVPGAAASRTSEIEGANQLLELFDLFRYFVHREIY---------------------------  118 (187)
T ss_dssp             EECCCTTHHHHHHHHHHHTCCEEEEECCSCHHHHHHHHHHTTCTTTEEEEEES---------------------------
T ss_pred             ccCcchhHHHHHHHHHHCCceEEEEeCCCChHHHHHHHHHcCcHhhcceeEEE---------------------------
Confidence            4578899999998874   7899999998 68899999999999999987543                           


Q ss_pred             cCCCCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHHcCCeEEEecCC
Q 022360          173 TTSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTVLIGKS  252 (298)
Q Consensus       173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a~~aG~~~v~v~~~  252 (298)
                                                      ++|++..+..+++++|++|++|++|||+.+|+.+|+++|+.++++.++
T Consensus       119 --------------------------------~~~k~~~~~~~~~~~~~~~~~~~~igD~~~Di~~a~~aG~~~i~v~~g  166 (187)
T 2wm8_A          119 --------------------------------PGSKITHFERLQQKTGIPFSQMIFFDDERRNIVDVSKLGVTCIHIQNG  166 (187)
T ss_dssp             --------------------------------SSCHHHHHHHHHHHHCCCGGGEEEEESCHHHHHHHHTTTCEEEECSSS
T ss_pred             --------------------------------eCchHHHHHHHHHHcCCChHHEEEEeCCccChHHHHHcCCEEEEECCC
Confidence                                            467889999999999999999999999999999999999999999877


Q ss_pred             C
Q 022360          253 Q  253 (298)
Q Consensus       253 ~  253 (298)
                      .
T Consensus       167 ~  167 (187)
T 2wm8_A          167 M  167 (187)
T ss_dssp             C
T ss_pred             C
Confidence            5

>3n28_A Phosphoserine phosphatase; HAD family hydrolase, structural genomics, PSI, protein STRU initiative, nysgrc; 2.30A {Vibrio cholerae}

Probab=99.71  E-value=2.4e-17  Score=152.07  Aligned_cols=137  Identities=12%  Similarity=0.092  Sum_probs=104.5

Q ss_pred             CCCChhHHHHHHhC---CCcEEEEeCCChHHHHHHHHHhCCCCccceeEeecCCCCCCCCCCCCChhhHHHHHhhhcccC
Q 022360           98 LKPDPVLRSLLLSL---PLRKIIFTNADKVHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSDDEDDIAFVESAASTTT  174 (298)
Q Consensus        98 ~~~~~g~~~~L~~l---~~~~~ivS~~~~~~~~~~l~~l~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  174 (298)
                      .+++||+.++|+.+   +++++++|++....++.+++++|+..+|+..+...+...                        
T Consensus       177 ~~~~pg~~~~l~~L~~~g~~~~ivS~~~~~~~~~~~~~lgl~~~~~~~l~~~d~~~------------------------  232 (335)
T 3n28_A          177 LPLMPELPELVATLHAFGWKVAIASGGFTYFSDYLKEQLSLDYAQSNTLEIVSGKL------------------------  232 (335)
T ss_dssp             CCCCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCSEEEEEEEEEETTEE------------------------
T ss_pred             CCcCcCHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHcCCCeEEeeeeEeeCCee------------------------
Confidence            57889999998877   488999999999999999999999988887654432110                        


Q ss_pred             CCCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHHcCCeEEEecCCCC
Q 022360          175 SANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTVLIGKSQR  254 (298)
Q Consensus       175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a~~aG~~~v~v~~~~~  254 (298)
                                .+.....      .    ..+|||+.++..+++++|++|++|++|||+.||+.|++.+|+++++.+....
T Consensus       233 ----------tg~~~~~------~----~~~kpk~~~~~~~~~~lgi~~~~~v~vGDs~nDi~~a~~aG~~va~~~~~~~  292 (335)
T 3n28_A          233 ----------TGQVLGE------V----VSAQTKADILLTLAQQYDVEIHNTVAVGDGANDLVMMAAAGLGVAYHAKPKV  292 (335)
T ss_dssp             ----------EEEEESC------C----CCHHHHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEEESCCHHH
T ss_pred             ----------eeeeccc------c----cChhhhHHHHHHHHHHcCCChhhEEEEeCCHHHHHHHHHCCCeEEeCCCHHH
Confidence                      0000000      0    0169999999999999999999999999999999999999999988333334


Q ss_pred             CCCCCEEeC--CHHHHHHHhHHhhcc
Q 022360          255 VKGADYAFE--SIHNIKEAIPELWES  278 (298)
Q Consensus       255 ~~~ad~i~~--s~~~l~~~l~~~~~~  278 (298)
                      +..+++++.  ++.++...|...+..
T Consensus       293 ~~~a~~v~~~~~l~~v~~~L~~~l~~  318 (335)
T 3n28_A          293 EAKAQTAVRFAGLGGVVCILSAALVA  318 (335)
T ss_dssp             HTTSSEEESSSCTHHHHHHHHHHHHH
T ss_pred             HhhCCEEEecCCHHHHHHHHHhHHHH
Confidence            667777664  566777878776643

>3e8m_A Acylneuraminate cytidylyltransferase; 2-keto-3-deoxynononic acid 9-phosphate phosphohydrolase, nucleotidyltransferase; HET: PEG PG4 EDO PGE; 1.10A {Bacteroides thetaiotaomicron} PDB: 3e84_A 3e81_A*

Probab=99.71  E-value=2.4e-17  Score=136.19  Aligned_cols=110  Identities=15%  Similarity=0.105  Sum_probs=91.0

Q ss_pred             HHHHHHhCCCcEEEEeCCChHHHHHHHHHhCCCCccceeEeecCCCCCCCCCCCCChhhHHHHHhhhcccCCCCCCchhh
Q 022360          104 LRSLLLSLPLRKIIFTNADKVHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSDDEDDIAFVESAASTTTSANGPQIFD  183 (298)
Q Consensus       104 ~~~~L~~l~~~~~ivS~~~~~~~~~~l~~l~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  183 (298)
                      +.+.|+..+++++++|+.....++..++++++..+|+.                                          
T Consensus        39 ~l~~l~~~g~~~~i~T~~~~~~~~~~~~~~gl~~~~~~------------------------------------------   76 (164)
T 3e8m_A           39 GIFWAHNKGIPVGILTGEKTEIVRRRAEKLKVDYLFQG------------------------------------------   76 (164)
T ss_dssp             HHHHHHHTTCCEEEECSSCCHHHHHHHHHTTCSEEECS------------------------------------------
T ss_pred             HHHHHHHCCCEEEEEeCCChHHHHHHHHHcCCCEeecc------------------------------------------
Confidence            46777778899999999999999999999998766532                                          


Q ss_pred             hccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHHcCCeEEEecCCC-CCCCCCEEe
Q 022360          184 IIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTVLIGKSQ-RVKGADYAF  262 (298)
Q Consensus       184 ~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a~~aG~~~v~v~~~~-~~~~ad~i~  262 (298)
                                           .||++.++..++++++++|++|++|||+.||+.+++.+|+.+++.+... .+..+++++
T Consensus        77 ---------------------~kpk~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~~~~ag~~~~~~~~~~~~~~~ad~v~  135 (164)
T 3e8m_A           77 ---------------------VVDKLSAAEELCNELGINLEQVAYIGDDLNDAKLLKRVGIAGVPASAPFYIRRLSTIFL  135 (164)
T ss_dssp             ---------------------CSCHHHHHHHHHHHHTCCGGGEEEECCSGGGHHHHTTSSEEECCTTSCHHHHTTCSSCC
T ss_pred             ---------------------cCChHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCeEEcCChHHHHHHhCcEEe
Confidence                                 4899999999999999999999999999999999999999887654332 367789999


Q ss_pred             CCHH---HHHHHhHHhh
Q 022360          263 ESIH---NIKEAIPELW  276 (298)
Q Consensus       263 ~s~~---~l~~~l~~~~  276 (298)
                      .+.+   .+.++++.++
T Consensus       136 ~~~~~~g~~~e~~~~ll  152 (164)
T 3e8m_A          136 EKRGGEGVFREFVEKVL  152 (164)
T ss_dssp             CCCTTTTHHHHHHHHHT
T ss_pred             ccCCCCcHHHHHHHHHH
Confidence            8833   2666666665

>3mmz_A Putative HAD family hydrolase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.84A {Streptomyces avermitilis}

Probab=99.71  E-value=2e-18  Score=145.27  Aligned_cols=105  Identities=16%  Similarity=0.157  Sum_probs=87.8

Q ss_pred             HHHHHHhCCCcEEEEeCCChHHHHHHHHHhCCCCccceeEeecCCCCCCCCCCCCChhhHHHHHhhhcccCCCCCCchhh
Q 022360          104 LRSLLLSLPLRKIIFTNADKVHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSDDEDDIAFVESAASTTTSANGPQIFD  183 (298)
Q Consensus       104 ~~~~L~~l~~~~~ivS~~~~~~~~~~l~~l~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  183 (298)
                      +.+.|+..+++++|+|+.....++..++++++. +|    ..                                      
T Consensus        47 ~l~~L~~~g~~~~i~T~~~~~~~~~~~~~lgi~-~~----~~--------------------------------------   83 (176)
T 3mmz_A           47 GIAALRKSGLTMLILSTEQNPVVAARARKLKIP-VL----HG--------------------------------------   83 (176)
T ss_dssp             HHHHHHHTTCEEEEEESSCCHHHHHHHHHHTCC-EE----ES--------------------------------------
T ss_pred             HHHHHHHCCCeEEEEECcChHHHHHHHHHcCCe-eE----eC--------------------------------------
Confidence            567777888999999999999999999999987 32    21                                      


Q ss_pred             hccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHHcCCeEEEecCC-CCCCCCCEEe
Q 022360          184 IIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTVLIGKS-QRVKGADYAF  262 (298)
Q Consensus       184 ~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a~~aG~~~v~v~~~-~~~~~ad~i~  262 (298)
                                           .|||+..++.+++++++++++|++|||+.||+.+++.+|+.+++.+.. ..+..+++++
T Consensus        84 ---------------------~~~k~~~l~~~~~~~~~~~~~~~~vGD~~nD~~~~~~ag~~v~~~~~~~~~~~~ad~v~  142 (176)
T 3mmz_A           84 ---------------------IDRKDLALKQWCEEQGIAPERVLYVGNDVNDLPCFALVGWPVAVASAHDVVRGAARAVT  142 (176)
T ss_dssp             ---------------------CSCHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTTCCHHHHHHSSEEC
T ss_pred             ---------------------CCChHHHHHHHHHHcCCCHHHEEEEcCCHHHHHHHHHCCCeEECCChhHHHHHhCCEEe
Confidence                                 489999999999999999999999999999999999999887765432 2367789999


Q ss_pred             CC------HHHHHHHh
Q 022360          263 ES------IHNIKEAI  272 (298)
Q Consensus       263 ~s------~~~l~~~l  272 (298)
                      .+      +.++.+.|
T Consensus       143 ~~~~~~g~~~~l~~~l  158 (176)
T 3mmz_A          143 TVPGGDGAIREIASWI  158 (176)
T ss_dssp             SSCTTTTHHHHHHHHH
T ss_pred             cCCCCCcHHHHHHHHH
Confidence            98      56665554

>3mn1_A Probable YRBI family phosphatase; structural genomics, PSI, protein structure initiative, NYSG phosphatase; 1.80A {Pseudomonas syringae PV} PDB: 3nrj_A

Probab=99.70  E-value=3.2e-18  Score=145.72  Aligned_cols=107  Identities=16%  Similarity=0.223  Sum_probs=88.6

Q ss_pred             HHHHHHhCCCcEEEEeCCChHHHHHHHHHhCCCCccceeEeecCCCCCCCCCCCCChhhHHHHHhhhcccCCCCCCchhh
Q 022360          104 LRSLLLSLPLRKIIFTNADKVHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSDDEDDIAFVESAASTTTSANGPQIFD  183 (298)
Q Consensus       104 ~~~~L~~l~~~~~ivS~~~~~~~~~~l~~l~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  183 (298)
                      +.+.|+..+++++|+|+.....++..++++|+..+|+.+                                         
T Consensus        54 ~l~~L~~~g~~~~i~T~~~~~~~~~~~~~lgl~~~f~~~-----------------------------------------   92 (189)
T 3mn1_A           54 GIKMLIASGVTTAIISGRKTAIVERRAKSLGIEHLFQGR-----------------------------------------   92 (189)
T ss_dssp             HHHHHHHTTCEEEEECSSCCHHHHHHHHHHTCSEEECSC-----------------------------------------
T ss_pred             HHHHHHHCCCEEEEEECcChHHHHHHHHHcCCHHHhcCc-----------------------------------------
Confidence            567778888999999999999999999999998777532                                         


Q ss_pred             hccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHHcCCeEEEecCC-CCCCCCCEEe
Q 022360          184 IIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTVLIGKS-QRVKGADYAF  262 (298)
Q Consensus       184 ~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a~~aG~~~v~v~~~-~~~~~ad~i~  262 (298)
                                            ++||..+..+++++|++|++|++|||+.||+.+++.+|+.+++.... ..+..+++++
T Consensus        93 ----------------------~~K~~~~~~~~~~~g~~~~~~~~vGD~~nDi~~~~~ag~~~~~~~~~~~~~~~ad~v~  150 (189)
T 3mn1_A           93 ----------------------EDKLVVLDKLLAELQLGYEQVAYLGDDLPDLPVIRRVGLGMAVANAASFVREHAHGIT  150 (189)
T ss_dssp             ----------------------SCHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHHTSSEEC
T ss_pred             ----------------------CChHHHHHHHHHHcCCChhHEEEECCCHHHHHHHHHCCCeEEeCCccHHHHHhCCEEe
Confidence                                  45569999999999999999999999999999999999987754332 2367789999


Q ss_pred             CC------HHHHHHHhH
Q 022360          263 ES------IHNIKEAIP  273 (298)
Q Consensus       263 ~s------~~~l~~~l~  273 (298)
                      .+      +.++.+.|.
T Consensus       151 ~~~~~~G~~~~l~~~l~  167 (189)
T 3mn1_A          151 RAQGGEGAAREFCELIL  167 (189)
T ss_dssp             SSCTTTTHHHHHHHHHH
T ss_pred             cCCCCCcHHHHHHHHHH
Confidence            98      455555443

>2p9j_A Hypothetical protein AQ2171; secsg, riken, PSI, structural GENO protein structure initiative, southeast collaboratory for S genomics; 2.40A {Aquifex aeolicus}

Probab=99.70  E-value=4.3e-18  Score=140.41  Aligned_cols=109  Identities=20%  Similarity=0.248  Sum_probs=87.7

Q ss_pred             HHHHhCCCcEEEEeCCChHHHHHHHHHhCCCCccceeEeecCCCCCCCCCCCCChhhHHHHHhhhcccCCCCCCchhhhc
Q 022360          106 SLLLSLPLRKIIFTNADKVHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSDDEDDIAFVESAASTTTSANGPQIFDII  185 (298)
Q Consensus       106 ~~L~~l~~~~~ivS~~~~~~~~~~l~~l~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  185 (298)
                      +.|+..+++++|+|+.....++..++++++..+|+.                                            
T Consensus        46 ~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~~~~--------------------------------------------   81 (162)
T 2p9j_A           46 KLLQKMGITLAVISGRDSAPLITRLKELGVEEIYTG--------------------------------------------   81 (162)
T ss_dssp             HHHHTTTCEEEEEESCCCHHHHHHHHHTTCCEEEEC--------------------------------------------
T ss_pred             HHHHHCCCEEEEEeCCCcHHHHHHHHHcCCHhhccC--------------------------------------------
Confidence            344455688999999999999999999998766531                                            


Q ss_pred             cccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHHcCCeEEEecCCC-CCCCCCEEeCC
Q 022360          186 GHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTVLIGKSQ-RVKGADYAFES  264 (298)
Q Consensus       186 ~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a~~aG~~~v~v~~~~-~~~~ad~i~~s  264 (298)
                                         +||++..+..++++++++|++|++|||+.+|+.+|+.+|+.+++..... .+..+++++.+
T Consensus        82 -------------------~kp~~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~ag~~~~~~~~~~~~~~~a~~v~~~  142 (162)
T 2p9j_A           82 -------------------SYKKLEIYEKIKEKYSLKDEEIGFIGDDVVDIEVMKKVGFPVAVRNAVEEVRKVAVYITQR  142 (162)
T ss_dssp             -------------------C--CHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHHHCSEECSS
T ss_pred             -------------------CCCCHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCeEEecCccHHHHhhCCEEecC
Confidence                               4999999999999999999999999999999999999999977543222 24579999999


Q ss_pred             HHH---HHHHhHHhhc
Q 022360          265 IHN---IKEAIPELWE  277 (298)
Q Consensus       265 ~~~---l~~~l~~~~~  277 (298)
                      +.+   +.++++.++.
T Consensus       143 ~~~~g~~~~~~~~~~~  158 (162)
T 2p9j_A          143 NGGEGALREVAELIHF  158 (162)
T ss_dssp             CSSSSHHHHHHHHHHH
T ss_pred             CCCCcHHHHHHHHHHH
Confidence            877   5577777653

>3dnp_A Stress response protein YHAX; structural PSI-2, protein structure initiative, midwest center for STR genomics, MCSG, unknown function; HET: MSE; 1.85A {Bacillus subtilis} SCOP: c.108.1.0

Probab=99.70  E-value=4.8e-18  Score=152.65  Aligned_cols=73  Identities=10%  Similarity=0.093  Sum_probs=64.8

Q ss_pred             CCCCHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHHcCCeEEEecCCC-CCCCCCEEeCCHHH--HHHHhHHhhc
Q 022360          205 CKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTVLIGKSQ-RVKGADYAFESIHN--IKEAIPELWE  277 (298)
Q Consensus       205 ~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a~~aG~~~v~v~~~~-~~~~ad~i~~s~~~--l~~~l~~~~~  277 (298)
                      +.+|+.+++.+++++|+++++|++|||+.||++|++.+|+++++.+... .+..|++++.+.++  +.++|++++.
T Consensus       200 ~~~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~vam~na~~~~k~~Ad~v~~s~~edGv~~~i~~~~~  275 (290)
T 3dnp_A          200 GVSKEAGLALVASELGLSMDDVVAIGHQYDDLPMIELAGLGVAMGNAVPEIKRKADWVTRSNDEQGVAYMMKEYFR  275 (290)
T ss_dssp             TCCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHHHSSEECCCTTTTHHHHHHHHHHH
T ss_pred             CCCHHHHHHHHHHHcCCCHHHEEEECCchhhHHHHHhcCCEEEecCCcHHHHHhcCEECCCCCccHHHHHHHHHHH
Confidence            5889999999999999999999999999999999999999888765433 47889999999887  8888888764

>3pdw_A Uncharacterized hydrolase YUTF; structural genomics, PSI2, NYSGXRC, protein structure initia YORK SGX research center for structural genomics; 1.60A {Bacillus subtilis} SCOP: c.108.1.0

Probab=99.70  E-value=2.8e-18  Score=152.43  Aligned_cols=70  Identities=24%  Similarity=0.396  Sum_probs=62.1

Q ss_pred             CCCCHHHHHHHHHHcCCCCCcEEEEcCC-ccchHHHHHcCCeEEEecCCCC-----CC---CCCEEeCCHHHHHHHhHH
Q 022360          205 CKPSELAIEKALKIASINPQRTLFFEDS-VRNIQAGKRVGLDTVLIGKSQR-----VK---GADYAFESIHNIKEAIPE  274 (298)
Q Consensus       205 ~kp~~~~~~~~l~~l~i~p~~~i~iGDs-~~Di~~a~~aG~~~v~v~~~~~-----~~---~ad~i~~s~~~l~~~l~~  274 (298)
                      +||++.+++.+++++|+++++|++|||+ .||+.|++.+|+.++++.++..     +.   .||++++++.+|.+-++.
T Consensus       182 ~kp~~~~~~~~~~~lgi~~~~~~~iGD~~~~Di~~~~~aG~~~~~v~~g~~~~~~~~~~~~~~d~v~~~~~el~~~~~~  260 (266)
T 3pdw_A          182 GKPESIIMEQAMRVLGTDVSETLMVGDNYATDIMAGINAGMDTLLVHTGVTKREHMTDDMEKPTHAIDSLTEWIPYIEG  260 (266)
T ss_dssp             STTSSHHHHHHHHHHTCCGGGEEEEESCTTTHHHHHHHHTCEEEEECCC------CCTTSCCCSEEESSGGGGHHHHHH
T ss_pred             CCCCHHHHHHHHHHcCCChhhEEEECCCcHHHHHHHHHCCCeEEEECCCCCChHHHHhcCCCCCEEeCCHHHHHHHhhc
Confidence            7999999999999999999999999999 6999999999999999987642     22   599999999999877654

>3gyg_A NTD biosynthesis operon putative hydrolase NTDB; PF05116, PF08282, MCSG, PSI-2, haloacid dehalogenase-like HY structural genomics; 2.45A {Bacillus subtilis subsp}

Probab=99.70  E-value=1.3e-17  Score=150.19  Aligned_cols=74  Identities=18%  Similarity=0.165  Sum_probs=63.0

Q ss_pred             CCCCHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHHcCCeEEEecCCC-CCCCCCEEeCCHHH--HHHHhHHhhcc
Q 022360          205 CKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTVLIGKSQ-RVKGADYAFESIHN--IKEAIPELWES  278 (298)
Q Consensus       205 ~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a~~aG~~~v~v~~~~-~~~~ad~i~~s~~~--l~~~l~~~~~~  278 (298)
                      ++||+.++.++++++|++|++|++|||+.||+.|++.+|+.+++.+... .+..+++++.+..+  +.+.|+++++.
T Consensus       209 ~~~k~~~~~~~~~~~~~~~~~~~~~GDs~~D~~~~~~ag~~~~~~~~~~~~~~~a~~v~~~~~~~gv~~~~~~~~~~  285 (289)
T 3gyg_A          209 GTGKNEIVTFMLEKYNLNTERAIAFGDSGNDVRMLQTVGNGYLLKNATQEAKNLHNLITDSEYSKGITNTLKKLIGF  285 (289)
T ss_dssp             CCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHTTSSEEEECTTCCHHHHHHCCCBCSSCHHHHHHHHHHHHTCC
T ss_pred             CCCHHHHHHHHHHHcCCChhhEEEEcCCHHHHHHHHhCCcEEEECCccHHHHHhCCEEcCCCCcCHHHHHHHHHHHH
Confidence            6999999999999999999999999999999999999997766543322 35678999998777  88999888764

>3ij5_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; IDP022 hydrolase, lipopolysaccharide biosynthesis, magnesium, STRU genomics; 1.95A {Yersinia pestis}

Probab=99.70  E-value=5.8e-18  Score=147.03  Aligned_cols=111  Identities=14%  Similarity=0.176  Sum_probs=91.9

Q ss_pred             HHHHHHhCCCcEEEEeCCChHHHHHHHHHhCCCCccceeEeecCCCCCCCCCCCCChhhHHHHHhhhcccCCCCCCchhh
Q 022360          104 LRSLLLSLPLRKIIFTNADKVHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSDDEDDIAFVESAASTTTSANGPQIFD  183 (298)
Q Consensus       104 ~~~~L~~l~~~~~ivS~~~~~~~~~~l~~l~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  183 (298)
                      +.+.|+..+++++|+|+.....++..++.+|+..+|+.                                          
T Consensus        84 ~L~~L~~~G~~l~I~T~~~~~~~~~~l~~lgi~~~f~~------------------------------------------  121 (211)
T 3ij5_A           84 GIRCLITSDIDVAIITGRRAKLLEDRANTLGITHLYQG------------------------------------------  121 (211)
T ss_dssp             HHHHHHHTTCEEEEECSSCCHHHHHHHHHHTCCEEECS------------------------------------------
T ss_pred             HHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCchhhcc------------------------------------------
Confidence            56778888899999999999999999999999876642                                          


Q ss_pred             hccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHHcCCeEEEecC-CCCCCCCCEEe
Q 022360          184 IIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTVLIGK-SQRVKGADYAF  262 (298)
Q Consensus       184 ~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a~~aG~~~v~v~~-~~~~~~ad~i~  262 (298)
                                           .|||+..++.+++++|++|++|++|||+.||+.+++.+|+.+++... ...+..|++++
T Consensus       122 ---------------------~k~K~~~l~~~~~~lg~~~~~~~~vGDs~nDi~~~~~ag~~~a~~~~~~~~~~~Ad~v~  180 (211)
T 3ij5_A          122 ---------------------QSDKLVAYHELLATLQCQPEQVAYIGDDLIDWPVMAQVGLSVAVADAHPLLLPKAHYVT  180 (211)
T ss_dssp             ---------------------CSSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHTTSSEEEECTTSCTTTGGGSSEEC
T ss_pred             ---------------------cCChHHHHHHHHHHcCcCcceEEEEcCCHHHHHHHHHCCCEEEeCCccHHHHhhCCEEE
Confidence                                 37788999999999999999999999999999999999998876643 33577899999


Q ss_pred             CCHHH---HHHHhHHhhc
Q 022360          263 ESIHN---IKEAIPELWE  277 (298)
Q Consensus       263 ~s~~~---l~~~l~~~~~  277 (298)
                      .+..+   +.++++.++.
T Consensus       181 ~~~~~~G~v~e~~~~ll~  198 (211)
T 3ij5_A          181 RIKGGRGAVREVCDLILL  198 (211)
T ss_dssp             SSCTTTTHHHHHHHHHHH
T ss_pred             eCCCCCcHHHHHHHHHHH
Confidence            88632   4555555543

>2oyc_A PLP phosphatase, pyridoxal phosphate phosphatase; structural genomics, NYSGXRC, NEW YORK SGX research center for structural genomics, PSI-2; 1.72A {Homo sapiens} PDB: 2p27_A 2p69_A* 2cft_A* 2cfs_A 2cfr_A*

Probab=99.68  E-value=2.5e-18  Score=156.50  Aligned_cols=70  Identities=33%  Similarity=0.425  Sum_probs=62.0

Q ss_pred             CCCCHHHHHHHHHHcCCCCCcEEEEcCCc-cchHHHHHcCCeEEEecCCCCC--------------CCCCEEeCCHHHHH
Q 022360          205 CKPSELAIEKALKIASINPQRTLFFEDSV-RNIQAGKRVGLDTVLIGKSQRV--------------KGADYAFESIHNIK  269 (298)
Q Consensus       205 ~kp~~~~~~~~l~~l~i~p~~~i~iGDs~-~Di~~a~~aG~~~v~v~~~~~~--------------~~ad~i~~s~~~l~  269 (298)
                      +||+|.+|+.+++++|++|++|++|||+. |||+||+.+|+.++++.++...              ..|+++++++.+|.
T Consensus       214 ~KP~~~~~~~~~~~lgi~~~e~l~vGD~~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~~~~~~~~~pd~vi~~l~el~  293 (306)
T 2oyc_A          214 GKPSPYMFECITENFSIDPARTLMVGDRLETDILFGHRCGMTTVLTLTGVSRLEEAQAYLAAGQHDLVPHYYVESIADLT  293 (306)
T ss_dssp             STTSTHHHHHHHHHSCCCGGGEEEEESCTTTHHHHHHHHTCEEEEESSSSCCHHHHHHHHHTTCGGGSCSEEESSGGGGG
T ss_pred             CCCCHHHHHHHHHHcCCChHHEEEECCCchHHHHHHHHCCCeEEEECCCCCCHHHHHhhhcccccCCCCCEEECCHHHHH
Confidence            79999999999999999999999999996 9999999999999999876531              47999999999987


Q ss_pred             HHhHH
Q 022360          270 EAIPE  274 (298)
Q Consensus       270 ~~l~~  274 (298)
                      +.+++
T Consensus       294 ~~l~~  298 (306)
T 2oyc_A          294 EGLED  298 (306)
T ss_dssp             GGC--
T ss_pred             HHHHh
Confidence            76654

>1qyi_A ZR25, hypothetical protein; structural genomics, PSI, protein structure initiative, NORT structural genomics consortium, NESG; 2.50A {Staphylococcus aureus subsp} SCOP: c.108.1.13

Probab=99.67  E-value=1.5e-16  Score=149.83  Aligned_cols=138  Identities=20%  Similarity=0.254  Sum_probs=112.0

Q ss_pred             CCCCChhHHHHHHhC---CCcEEEEeCCChHHHHHHHHHhCCCCccc--eeEeecCCCCCCCCCCCCChhhHHHHHhhhc
Q 022360           97 NLKPDPVLRSLLLSL---PLRKIIFTNADKVHAVKVLSRLGLEDCFE--GIICFETLNPTHKNTVSDDEDDIAFVESAAS  171 (298)
Q Consensus        97 ~~~~~~g~~~~L~~l---~~~~~ivS~~~~~~~~~~l~~l~l~~~f~--~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  171 (298)
                      ...++||+.++|+.|   +++++|+||+....++..++++|+..+|+  .++++++.+..            ..      
T Consensus       213 ~~~l~pGv~elL~~Lk~~Gi~laIvTn~~~~~~~~~L~~lgL~~~Fd~~~Ivs~ddv~~~------------~~------  274 (384)
T 1qyi_A          213 ILRPVDEVKVLLNDLKGAGFELGIATGRPYTETVVPFENLGLLPYFEADFIATASDVLEA------------EN------  274 (384)
T ss_dssp             BSSCHHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCGGGSCGGGEECHHHHHHH------------HH------
T ss_pred             CCCcCcCHHHHHHHHHhCCCEEEEEeCCcHHHHHHHHHHcCChHhcCCCEEEeccccccc------------cc------
Confidence            467899999999988   48899999999999999999999999999  78877653200            00      


Q ss_pred             ccCCCCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcC--------------CCCCcEEEEcCCccchH
Q 022360          172 TTTSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIAS--------------INPQRTLFFEDSVRNIQ  237 (298)
Q Consensus       172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~--------------i~p~~~i~iGDs~~Di~  237 (298)
                                               ..+.....+||+|..|..++++++              ++|++|++|||+.+|+.
T Consensus       275 -------------------------~~~~~kp~~KP~P~~~~~a~~~lg~~~~~~~~~~~~~~v~p~e~l~VGDs~~Di~  329 (384)
T 1qyi_A          275 -------------------------MYPQARPLGKPNPFSYIAALYGNNRDKYESYINKQDNIVNKDDVFIVGDSLADLL  329 (384)
T ss_dssp             -------------------------HSTTSCCCCTTSTHHHHHHHHCCCGGGHHHHHHCCTTCSCTTTEEEEESSHHHHH
T ss_pred             -------------------------ccccccCCCCCCHHHHHHHHHHcCCccccccccccccCCCCcCeEEEcCCHHHHH
Confidence                                     000000016999999999999999              89999999999999999


Q ss_pred             HHHHcCCeEEEecCCCC---------CCCCCEEeCCHHHHHHHhHHhhc
Q 022360          238 AGKRVGLDTVLIGKSQR---------VKGADYAFESIHNIKEAIPELWE  277 (298)
Q Consensus       238 ~a~~aG~~~v~v~~~~~---------~~~ad~i~~s~~~l~~~l~~~~~  277 (298)
                      +|+++|+.++++.++..         ...|+++++++.+|.+.|...++
T Consensus       330 aAk~AG~~~I~V~~g~~~~~~~~~l~~~~ad~vi~sl~eL~~~l~~~~~  378 (384)
T 1qyi_A          330 SAQKIGATFIGTLTGLKGKDAAGELEAHHADYVINHLGELRGVLDNLLE  378 (384)
T ss_dssp             HHHHHTCEEEEESCBTTBGGGHHHHHHTTCSEEESSGGGHHHHHSCTTT
T ss_pred             HHHHcCCEEEEECCCccccccHHHHhhcCCCEEECCHHHHHHHHHHHHh
Confidence            99999999999987642         24799999999999988876554

>1zjj_A Hypothetical protein PH1952; alpha/beta hydrolase fold, HAD superfamily, structural genom riken structural genomics/proteomics initiative; 1.85A {Pyrococcus horikoshii}

Probab=99.67  E-value=6.1e-18  Score=150.52  Aligned_cols=120  Identities=14%  Similarity=0.133  Sum_probs=89.2

Q ss_pred             CCCChhHHHHHHhCC--CcEEEEeCCChHHH--HHHHHH-hCCCCccceeEeecCCCCCCCCCCCCChhhHHHHHhhhcc
Q 022360           98 LKPDPVLRSLLLSLP--LRKIIFTNADKVHA--VKVLSR-LGLEDCFEGIICFETLNPTHKNTVSDDEDDIAFVESAAST  172 (298)
Q Consensus        98 ~~~~~g~~~~L~~l~--~~~~ivS~~~~~~~--~~~l~~-l~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  172 (298)
                      ..++|++.++|+.|+  .++ ++||.+....  ...+.. .++..+|+.+++.++...                      
T Consensus       129 ~~~~~~~~~~l~~L~~g~~~-i~tn~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~----------------------  185 (263)
T 1zjj_A          129 DLTYEKLKYATLAIRNGATF-IGTNPDATLPGEEGIYPGAGSIIAALKVATNVEPIII----------------------  185 (263)
T ss_dssp             TCBHHHHHHHHHHHHTTCEE-EESCCCSEEEETTEEEECHHHHHHHHHHHHCCCCEEC----------------------
T ss_pred             CCCHHHHHHHHHHHHCCCEE-EEECCCccccCCCCCcCCcHHHHHHHHHHhCCCccEe----------------------
Confidence            456788888877653  445 7788765433  222222 344556666666554432                      


Q ss_pred             cCCCCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCc-cchHHHHHcCCeEEEecC
Q 022360          173 TTSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSV-RNIQAGKRVGLDTVLIGK  251 (298)
Q Consensus       173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~p~~~i~iGDs~-~Di~~a~~aG~~~v~v~~  251 (298)
                                                      +||+|.+|+.++++  ++|++|+||||+. +||.+|+++|+.++++.+
T Consensus       186 --------------------------------~KP~~~~~~~~~~~--~~~~~~~~VGD~~~~Di~~A~~aG~~~i~v~~  231 (263)
T 1zjj_A          186 --------------------------------GKPNEPMYEVVREM--FPGEELWMVGDRLDTDIAFAKKFGMKAIMVLT  231 (263)
T ss_dssp             --------------------------------STTSHHHHHHHHHH--STTCEEEEEESCTTTHHHHHHHTTCEEEEESS
T ss_pred             --------------------------------cCCCHHHHHHHHHh--CCcccEEEECCChHHHHHHHHHcCCeEEEECC
Confidence                                            79999999999999  9999999999996 999999999999999987


Q ss_pred             CCC-----C---CCCCEEeCCHHHHHHHhHH
Q 022360          252 SQR-----V---KGADYAFESIHNIKEAIPE  274 (298)
Q Consensus       252 ~~~-----~---~~ad~i~~s~~~l~~~l~~  274 (298)
                      +..     .   ..++++++++.+|.++|.+
T Consensus       232 g~~~~~~~~~~~~~p~~~~~~l~el~~~l~~  262 (263)
T 1zjj_A          232 GVSSLEDIKKSEYKPDLVLPSVYELIDYLKT  262 (263)
T ss_dssp             SSCCHHHHTTCSSCCSEEESSGGGGGGGGC-
T ss_pred             CCCChHHHHhcCCCCCEEECCHHHHHHHHhh
Confidence            653     1   2799999999998876654

>3fzq_A Putative hydrolase; YP_001086940.1, putative haloacid dehalogenase-like hydrolas structural genomics, joint center for structural genomics; HET: MSE; 2.10A {Clostridium difficile} SCOP: c.108.1.0

Probab=99.67  E-value=1.2e-17  Score=148.24  Aligned_cols=71  Identities=15%  Similarity=0.112  Sum_probs=62.5

Q ss_pred             CCCCHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHHcCCeEEEecCCC-CCCCCCEEeCCHHH--HHHHhHHh
Q 022360          205 CKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTVLIGKSQ-RVKGADYAFESIHN--IKEAIPEL  275 (298)
Q Consensus       205 ~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a~~aG~~~v~v~~~~-~~~~ad~i~~s~~~--l~~~l~~~  275 (298)
                      +++|+.+++++++++|++++++++|||+.||++|++.+|++++|.+... .+..|++++.+.++  +.++|+++
T Consensus       198 ~~~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~vam~na~~~~k~~A~~v~~~~~edGv~~~l~~~  271 (274)
T 3fzq_A          198 DFHKGKAIKRLQERLGVTQKETICFGDGQNDIVMFQASDVTIAMKNSHQQLKDIATSICEDIFDNGIYKELKRR  271 (274)
T ss_dssp             TCSHHHHHHHHHHHHTCCSTTEEEECCSGGGHHHHHTCSEEEEETTSCHHHHHHCSEEECCGGGTHHHHHHHHT
T ss_pred             CCCHHHHHHHHHHHcCCCHHHEEEECCChhHHHHHHhcCceEEecCccHHHHHhhhheeCCCchhHHHHHHHHh
Confidence            5899999999999999999999999999999999999998888765443 47789999999876  88888765

>2fpr_A Histidine biosynthesis bifunctional protein HISB; histidinola phosphate phosphatase, bifunctional enzyme structural genomics; 1.70A {Escherichia coli} SCOP: c.108.1.19 PDB: 2fps_A 2fpu_A* 2fpx_A 2fpw_A*

Probab=99.67  E-value=2.1e-17  Score=139.01  Aligned_cols=101  Identities=17%  Similarity=0.343  Sum_probs=83.7

Q ss_pred             CCCCChhHHHHHHhCC---CcEEEEeCC---------------ChHHHHHHHHHhCCCCccceeEee-----cCCCCCCC
Q 022360           97 NLKPDPVLRSLLLSLP---LRKIIFTNA---------------DKVHAVKVLSRLGLEDCFEGIICF-----ETLNPTHK  153 (298)
Q Consensus        97 ~~~~~~g~~~~L~~l~---~~~~ivS~~---------------~~~~~~~~l~~l~l~~~f~~i~~~-----~~~~~~~~  153 (298)
                      ...++||+.++|+.|+   ++++|+||+               ....+...++.+++.  |+.++.+     ++.+.   
T Consensus        40 ~~~~~pg~~e~L~~L~~~G~~l~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~--fd~v~~s~~~~~~~~~~---  114 (176)
T 2fpr_A           40 KLAFEPGVIPQLLKLQKAGYKLVMITNQDGLGTQSFPQADFDGPHNLMMQIFTSQGVQ--FDEVLICPHLPADECDC---  114 (176)
T ss_dssp             GCCBCTTHHHHHHHHHHTTEEEEEEEECTTTTBTTBCHHHHHHHHHHHHHHHHHTTCC--EEEEEEECCCGGGCCSS---
T ss_pred             HCcCCccHHHHHHHHHHCCCEEEEEECCccccccccchHhhhhhHHHHHHHHHHcCCC--eeEEEEcCCCCcccccc---
Confidence            3578899999988874   789999998               567788899999987  8888754     44443   


Q ss_pred             CCCCCChhhHHHHHhhhcccCCCCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCc
Q 022360          154 NTVSDDEDDIAFVESAASTTTSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSV  233 (298)
Q Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~p~~~i~iGDs~  233 (298)
                                                                         .||+|.+|+.++++++++|++|++|||+.
T Consensus       115 ---------------------------------------------------~KP~p~~~~~~~~~~gi~~~~~l~VGD~~  143 (176)
T 2fpr_A          115 ---------------------------------------------------RKPKVKLVERYLAEQAMDRANSYVIGDRA  143 (176)
T ss_dssp             ---------------------------------------------------STTSCGGGGGGC----CCGGGCEEEESSH
T ss_pred             ---------------------------------------------------cCCCHHHHHHHHHHcCCCHHHEEEEcCCH
Confidence                                                               79999999999999999999999999999


Q ss_pred             cchHHHHHcCCeEEEecCCC
Q 022360          234 RNIQAGKRVGLDTVLIGKSQ  253 (298)
Q Consensus       234 ~Di~~a~~aG~~~v~v~~~~  253 (298)
                      +|+.+|+++|+.++++.++.
T Consensus       144 ~Di~~A~~aG~~~i~v~~~~  163 (176)
T 2fpr_A          144 TDIQLAENMGINGLRYDRET  163 (176)
T ss_dssp             HHHHHHHHHTSEEEECBTTT
T ss_pred             HHHHHHHHcCCeEEEEcCCc
Confidence            99999999999999997764

>2hx1_A Predicted sugar phosphatases of the HAD superfamily; ZP_00311070.1, possible sugar phosphatase, structural genomics; HET: MSE EPE; 2.10A {Cytophaga hutchinsonii}

Probab=99.67  E-value=1.5e-18  Score=155.97  Aligned_cols=114  Identities=20%  Similarity=0.185  Sum_probs=88.0

Q ss_pred             CChhHHHHHHhCCCcEEEEeCCChHHH--H--HHHHHhCCCCccceeEeecCCCCCCCCCCCCChhhHHHHHhhhcccCC
Q 022360          100 PDPVLRSLLLSLPLRKIIFTNADKVHA--V--KVLSRLGLEDCFEGIICFETLNPTHKNTVSDDEDDIAFVESAASTTTS  175 (298)
Q Consensus       100 ~~~g~~~~L~~l~~~~~ivS~~~~~~~--~--~~l~~l~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  175 (298)
                      .++++.+.|+..+.+ +|+||.+....  .  ..++..++..+|+.++++++.+.                         
T Consensus       149 ~~~~l~~~L~~~g~~-~i~tn~~~~~~~~~~~~~~~~~~l~~~f~~~~~~~~~~~-------------------------  202 (284)
T 2hx1_A          149 DLNKTVNLLRKRTIP-AIVANTDNTYPLTKTDVAIAIGGVATMIESILGRRFIRF-------------------------  202 (284)
T ss_dssp             HHHHHHHHHHHCCCC-EEEECCCSEEECSSSCEEECHHHHHHHHHHHHCSCEEEE-------------------------
T ss_pred             cHHHHHHHHhcCCCe-EEEECCCccccCcCCCccccCChHHHHHHHHhCCceeEe-------------------------
Confidence            345555555566677 88888766654  2  12345566777887777665543                         


Q ss_pred             CCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHc----CCCCCcEEEEcCCc-cchHHHHHcCCeEEEec
Q 022360          176 ANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIA----SINPQRTLFFEDSV-RNIQAGKRVGLDTVLIG  250 (298)
Q Consensus       176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l----~i~p~~~i~iGDs~-~Di~~a~~aG~~~v~v~  250 (298)
                                                   +||+|.+|..+++++    |++|++|+||||+. +||.+|+++|+.++++.
T Consensus       203 -----------------------------~KP~p~~~~~a~~~l~~~~~~~~~~~~~VGD~~~~Di~~A~~aG~~~i~v~  253 (284)
T 2hx1_A          203 -----------------------------GKPDSQMFMFAYDMLRQKMEISKREILMVGDTLHTDILGGNKFGLDTALVL  253 (284)
T ss_dssp             -----------------------------STTSSHHHHHHHHHHHTTSCCCGGGEEEEESCTTTHHHHHHHHTCEEEEES
T ss_pred             -----------------------------cCCCHHHHHHHHHHHhhccCCCcceEEEECCCcHHHHHHHHHcCCeEEEEC
Confidence                                         799999999999999    99999999999996 99999999999999998


Q ss_pred             CCCC-----C-------CCCCEEeCCHHHH
Q 022360          251 KSQR-----V-------KGADYAFESIHNI  268 (298)
Q Consensus       251 ~~~~-----~-------~~ad~i~~s~~~l  268 (298)
                      ++..     .       ..|+++++++.+|
T Consensus       254 ~g~~~~~~l~~~~~~~~~~pd~~~~~l~el  283 (284)
T 2hx1_A          254 TGNTRIDDAETKIKSTGIVPTHICESAVIE  283 (284)
T ss_dssp             SSSSCGGGHHHHHHHHTCCCSEEESCSCCC
T ss_pred             CCCCCHHHHHhhhhccCCCCCEEccchhhh
Confidence            7653     1       4689999887664

>1k1e_A Deoxy-D-mannose-octulosonate 8-phosphate phosphat; structural genomics, KDO 8-P phosphatase, structure function project, S2F; HET: MES; 1.67A {Haemophilus influenzae RD} SCOP: c.108.1.5 PDB: 1j8d_A*

Probab=99.66  E-value=6.6e-17  Score=136.21  Aligned_cols=111  Identities=14%  Similarity=0.157  Sum_probs=89.8

Q ss_pred             HHHHHHhCCCcEEEEeCCChHHHHHHHHHhCCCCccceeEeecCCCCCCCCCCCCChhhHHHHHhhhcccCCCCCCchhh
Q 022360          104 LRSLLLSLPLRKIIFTNADKVHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSDDEDDIAFVESAASTTTSANGPQIFD  183 (298)
Q Consensus       104 ~~~~L~~l~~~~~ivS~~~~~~~~~~l~~l~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  183 (298)
                      +.+.|+..+++++++|+.....++..++.+++..+|+.                                          
T Consensus        43 ~l~~L~~~G~~~~i~Tg~~~~~~~~~~~~lgl~~~~~~------------------------------------------   80 (180)
T 1k1e_A           43 GIKMLMDADIQVAVLSGRDSPILRRRIADLGIKLFFLG------------------------------------------   80 (180)
T ss_dssp             HHHHHHHTTCEEEEEESCCCHHHHHHHHHHTCCEEEES------------------------------------------
T ss_pred             HHHHHHHCCCeEEEEeCCCcHHHHHHHHHcCCceeecC------------------------------------------
Confidence            44556666789999999999999999999998766521                                          


Q ss_pred             hccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHHcCCeEEEecCC-CCCCCCCEEe
Q 022360          184 IIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTVLIGKS-QRVKGADYAF  262 (298)
Q Consensus       184 ~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a~~aG~~~v~v~~~-~~~~~ad~i~  262 (298)
                                           .|||+..++.++++++++|++|++|||+.||+.+++.+|+.+++.+.. ..+..+++++
T Consensus        81 ---------------------~k~k~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~~~~ag~~~~~~~~~~~~~~~ad~v~  139 (180)
T 1k1e_A           81 ---------------------KLEKETACFDLMKQAGVTAEQTAYIGDDSVDLPAFAACGTSFAVADAPIYVKNAVDHVL  139 (180)
T ss_dssp             ---------------------CSCHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHTTSSEEC
T ss_pred             ---------------------CCCcHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHcCCeEEeCCccHHHHhhCCEEe
Confidence                                 589999999999999999999999999999999999999998865332 2367899999


Q ss_pred             CCHHH--HH-HHhHHhhc
Q 022360          263 ESIHN--IK-EAIPELWE  277 (298)
Q Consensus       263 ~s~~~--l~-~~l~~~~~  277 (298)
                      .+.++  +. ++++.++.
T Consensus       140 ~~~~~~g~~~~~~~~~l~  157 (180)
T 1k1e_A          140 STHGGKGAFREMSDMILQ  157 (180)
T ss_dssp             SSCTTTTHHHHHHHHHHH
T ss_pred             cCCCCCcHHHHHHHHHHH
Confidence            98643  33 55555543

>3epr_A Hydrolase, haloacid dehalogenase-like family; structural genomics, unknown function, HAD superfamily hydro PSI-2; 1.55A {Streptococcus agalactiae serogroup V} SCOP: c.108.1.14 PDB: 1ys9_A 1wvi_A 1ydf_A

Probab=99.66  E-value=1.3e-16  Score=141.96  Aligned_cols=65  Identities=25%  Similarity=0.415  Sum_probs=58.6

Q ss_pred             CCCCHHHHHHHHHHcCCCCCcEEEEcCC-ccchHHHHHcCCeEEEecCCCC-----C---CCCCEEeCCHHHHH
Q 022360          205 CKPSELAIEKALKIASINPQRTLFFEDS-VRNIQAGKRVGLDTVLIGKSQR-----V---KGADYAFESIHNIK  269 (298)
Q Consensus       205 ~kp~~~~~~~~l~~l~i~p~~~i~iGDs-~~Di~~a~~aG~~~v~v~~~~~-----~---~~ad~i~~s~~~l~  269 (298)
                      +||++.+++.+++++|++|++|++|||+ .||+.||+++|+.++++.++..     .   ..||++++++.+|.
T Consensus       181 ~Kp~~~~~~~~~~~~~~~~~~~~~vGD~~~~Di~~a~~aG~~~~~v~~g~~~~~~~~~~~~~pd~~~~~l~~l~  254 (264)
T 3epr_A          181 GKPNAIIMNKALEILNIPRNQAVMVGDNYLTDIMAGINNDIDTLLVTTGFTTVEEVPDLPIQPSYVLASLDEWT  254 (264)
T ss_dssp             STTSHHHHHHHHHHHTSCGGGEEEEESCTTTHHHHHHHHTCEEEEETTSSSCGGGGGGCSSCCSEEESCGGGCC
T ss_pred             CCCCHHHHHHHHHHhCcCcccEEEECCCcHHHHHHHHHCCCeEEEECCCCCChHHHHhcCCCCCEEECCHHHHh
Confidence            7999999999999999999999999999 5999999999999999987753     1   27999999988763

>3l7y_A Putative uncharacterized protein SMU.1108C; hydrolase; 2.00A {Streptococcus mutans}

Probab=99.66  E-value=3.6e-17  Score=148.67  Aligned_cols=73  Identities=15%  Similarity=0.160  Sum_probs=64.1

Q ss_pred             CCCCHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHHcCCeEEEecCCC-CCCCCCEEeCCHHH--HHHHhHHhhc
Q 022360          205 CKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTVLIGKSQ-RVKGADYAFESIHN--IKEAIPELWE  277 (298)
Q Consensus       205 ~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a~~aG~~~v~v~~~~-~~~~ad~i~~s~~~--l~~~l~~~~~  277 (298)
                      +.+|+.+++.+++++|+++++|++|||+.||++|++.+|+++++.+... .+..|++++.+.++  +.++|++++.
T Consensus       226 ~~~K~~al~~l~~~lgi~~~e~i~~GDs~NDi~m~~~ag~~vam~na~~~~k~~Ad~v~~~~~edGv~~~l~~~~~  301 (304)
T 3l7y_A          226 GLHKGWALQQLLKRWNFTSDHLMAFGDGGNDIEMLKLAKYSYAMANAPKNVKAAANYQAKSNDESGVLDVIDNYLA  301 (304)
T ss_dssp             TCSHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHCTEEEECTTSCHHHHHHCSEECCCGGGTHHHHHHHHHHH
T ss_pred             CCCHHHHHHHHHHHhCcCHHHEEEECCCHHHHHHHHhcCCeEEcCCcCHHHHHhccEEcCCCCcchHHHHHHHHHH
Confidence            5788999999999999999999999999999999999998888764433 47889999999888  8888888764

>3n07_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; structural genomics, phosphatase, PSI-2, protein structure initiative; HET: MSE; 1.76A {Vibrio cholerae}

Probab=99.65  E-value=2e-16  Score=135.64  Aligned_cols=110  Identities=15%  Similarity=0.181  Sum_probs=89.5

Q ss_pred             HHHHHhCCCcEEEEeCCChHHHHHHHHHhCCCCccceeEeecCCCCCCCCCCCCChhhHHHHHhhhcccCCCCCCchhhh
Q 022360          105 RSLLLSLPLRKIIFTNADKVHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSDDEDDIAFVESAASTTTSANGPQIFDI  184 (298)
Q Consensus       105 ~~~L~~l~~~~~ivS~~~~~~~~~~l~~l~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  184 (298)
                      .+.|+..+++++|+|+.....++..++.+|+..+|+.                                           
T Consensus        61 l~~L~~~G~~~~ivT~~~~~~~~~~l~~lgi~~~~~~-------------------------------------------   97 (195)
T 3n07_A           61 VKALMNAGIEIAIITGRRSQIVENRMKALGISLIYQG-------------------------------------------   97 (195)
T ss_dssp             HHHHHHTTCEEEEECSSCCHHHHHHHHHTTCCEEECS-------------------------------------------
T ss_pred             HHHHHHCCCEEEEEECcCHHHHHHHHHHcCCcEEeeC-------------------------------------------
Confidence            5667788899999999999999999999998765421                                           


Q ss_pred             ccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHHcCCeEEEecCC-CCCCCCCEEeC
Q 022360          185 IGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTVLIGKS-QRVKGADYAFE  263 (298)
Q Consensus       185 ~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a~~aG~~~v~v~~~-~~~~~ad~i~~  263 (298)
                                          .|||+..++.++++++++|++|++|||+.||+.+++.+|+.+++.+.. ..+..+++++.
T Consensus        98 --------------------~k~k~~~~~~~~~~~~~~~~~~~~vGD~~nDi~~~~~ag~~va~~na~~~~~~~ad~v~~  157 (195)
T 3n07_A           98 --------------------QDDKVQAYYDICQKLAIAPEQTGYIGDDLIDWPVMEKVALRVCVADGHPLLAQRANYVTH  157 (195)
T ss_dssp             --------------------CSSHHHHHHHHHHHHCCCGGGEEEEESSGGGHHHHTTSSEEEECTTSCHHHHHHCSEECS
T ss_pred             --------------------CCCcHHHHHHHHHHhCCCHHHEEEEcCCHHHHHHHHHCCCEEEECChHHHHHHhCCEEEc
Confidence                                489999999999999999999999999999999999999988765332 23678999998


Q ss_pred             CHHH---HHHHhHHhhc
Q 022360          264 SIHN---IKEAIPELWE  277 (298)
Q Consensus       264 s~~~---l~~~l~~~~~  277 (298)
                      +..+   +.++++.++.
T Consensus       158 ~~~~~G~~~~~~~~il~  174 (195)
T 3n07_A          158 IKGGHGAVREVCDLILQ  174 (195)
T ss_dssp             SCTTTTHHHHHHHHHHH
T ss_pred             CCCCCCHHHHHHHHHHH
Confidence            7532   3444444443

>3mpo_A Predicted hydrolase of the HAD superfamily; SGX, PSI, structural genomics, protein structure initiative; 2.90A {Lactobacillus brevis} SCOP: c.108.1.0

Probab=99.65  E-value=6.4e-18  Score=151.02  Aligned_cols=73  Identities=10%  Similarity=0.045  Sum_probs=53.2

Q ss_pred             CCCCHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHHcCCeEEEecCCC-CCCCCCEEeCCHHH--HHHHhHHhhc
Q 022360          205 CKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTVLIGKSQ-RVKGADYAFESIHN--IKEAIPELWE  277 (298)
Q Consensus       205 ~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a~~aG~~~v~v~~~~-~~~~ad~i~~s~~~--l~~~l~~~~~  277 (298)
                      +.+|+.+++.+++++|+++++|++|||+.||++|++.+|++++|.+... .+..|++++.+.++  +.++|++++.
T Consensus       195 ~~~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~vam~na~~~~k~~A~~v~~~~~e~Gv~~~i~~~~~  270 (279)
T 3mpo_A          195 RASKGGTLSELVDQLGLTADDVMTLGDQGNDLTMIKYAGLGVAMGNAIDEVKEAAQAVTLTNAENGVAAAIRKYAL  270 (279)
T ss_dssp             SCCHHHHHHHHHHHTTCCGGGEEEC--CCTTHHHHHHSTEECBC---CCHHHHHCSCBC------CHHHHHC----
T ss_pred             CCChHHHHHHHHHHcCCCHHHEEEECCchhhHHHHHhcCceeeccCCCHHHHHhcceeccCCCccHHHHHHHHHhc
Confidence            4778999999999999999999999999999999999998888765443 47889999998776  8888887653

>3a1c_A Probable copper-exporting P-type ATPase A; ATP-binding, cell membrane, copper transport, hydrolase, ION transport, magnesium, membrane; HET: ACP; 1.85A {Archaeoglobus fulgidus} PDB: 3a1d_A* 3a1e_A* 2b8e_A 2voy_J 2voy_I

Probab=99.65  E-value=7.3e-17  Score=145.75  Aligned_cols=112  Identities=13%  Similarity=0.157  Sum_probs=90.4

Q ss_pred             CCCCChhHHHHHHhC---CCcEEEEeCCChHHHHHHHHHhCCCCccceeEeecCCCCCCCCCCCCChhhHHHHHhhhccc
Q 022360           97 NLKPDPVLRSLLLSL---PLRKIIFTNADKVHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSDDEDDIAFVESAASTT  173 (298)
Q Consensus        97 ~~~~~~g~~~~L~~l---~~~~~ivS~~~~~~~~~~l~~l~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  173 (298)
                      ...++||+.++|+.|   +++++|+|++....++..++.+|+..+|+.++                              
T Consensus       161 ~~~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~f~~i~------------------------------  210 (287)
T 3a1c_A          161 SDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLDLVIAEVL------------------------------  210 (287)
T ss_dssp             ECCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCSEEECSCC------------------------------
T ss_pred             ccccchhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhCCceeeeecC------------------------------
Confidence            457899999999887   47899999999999999999999988876553                              


Q ss_pred             CCCCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHHcCCeEEEecC-C
Q 022360          174 TSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTVLIGK-S  252 (298)
Q Consensus       174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a~~aG~~~v~v~~-~  252 (298)
                                                     +++|    ..++++++.. ++|++|||+.||+.+|+++|+.+++... .
T Consensus       211 -------------------------------~~~K----~~~~~~l~~~-~~~~~vGDs~~Di~~a~~ag~~v~~~~~~~  254 (287)
T 3a1c_A          211 -------------------------------PHQK----SEEVKKLQAK-EVVAFVGDGINDAPALAQADLGIAVGSGSD  254 (287)
T ss_dssp             -------------------------------TTCH----HHHHHHHTTT-CCEEEEECTTTCHHHHHHSSEEEEECCCSC
T ss_pred             -------------------------------hHHH----HHHHHHHhcC-CeEEEEECCHHHHHHHHHCCeeEEeCCCCH
Confidence                                           1232    5677888888 9999999999999999999998554322 2


Q ss_pred             CCCCCCCEEe--CCHHHHHHHhHH
Q 022360          253 QRVKGADYAF--ESIHNIKEAIPE  274 (298)
Q Consensus       253 ~~~~~ad~i~--~s~~~l~~~l~~  274 (298)
                      .....+++++  +++.+|.+.|..
T Consensus       255 ~~~~~ad~v~~~~~~~~l~~~l~~  278 (287)
T 3a1c_A          255 VAVESGDIVLIRDDLRDVVAAIQL  278 (287)
T ss_dssp             CSSCCSSEEESSSCTHHHHHHHHT
T ss_pred             HHHhhCCEEEeCCCHHHHHHHHHH
Confidence            2356799999  999998877643

>1wr8_A Phosphoglycolate phosphatase; alpha / beta core domain, HAD superfamily, structural genomi structural genomics/proteomics initiative, RSGI; 1.60A {Pyrococcus horikoshii} SCOP: c.108.1.10

Probab=99.65  E-value=2.3e-16  Score=137.83  Aligned_cols=71  Identities=24%  Similarity=0.281  Sum_probs=61.2

Q ss_pred             CCCCHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHHcCCeEEEecCCCC--CCCCCEEeCCHHH--HHHHhHHhh
Q 022360          205 CKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTVLIGKSQR--VKGADYAFESIHN--IKEAIPELW  276 (298)
Q Consensus       205 ~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a~~aG~~~v~v~~~~~--~~~ad~i~~s~~~--l~~~l~~~~  276 (298)
                      ++||+.+++.+++++|+++++|++|||+.||+.|++.+|+.++ ++++..  +..|++++.+.++  +.++|++++
T Consensus       151 ~~~K~~~~~~~~~~~~~~~~~~~~iGD~~nD~~~~~~ag~~v~-~~~~~~~~~~~a~~v~~~~~e~Gv~~~l~~~~  225 (231)
T 1wr8_A          151 WINKGSGIEKASEFLGIKPKEVAHVGDGENDLDAFKVVGYKVA-VAQAPKILKENADYVTKKEYGEGGAEAIYHIL  225 (231)
T ss_dssp             TCCHHHHHHHHHHHHTSCGGGEEEEECSGGGHHHHHHSSEEEE-CTTSCHHHHTTCSEECSSCHHHHHHHHHHHHH
T ss_pred             CCChHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHcCCeEE-ecCCCHHHHhhCCEEecCCCcchHHHHHHHHH
Confidence            6999999999999999999999999999999999999999854 444432  5689999999876  888888765

>3n1u_A Hydrolase, HAD superfamily, subfamily III A; structural genomics, PSI-2; 1.80A {Legionella pneumophila} SCOP: c.108.1.0

Probab=99.64  E-value=3.1e-16  Score=133.69  Aligned_cols=98  Identities=19%  Similarity=0.280  Sum_probs=83.5

Q ss_pred             HHHHHhCCCcEEEEeCCChHHHHHHHHHhCCCCccceeEeecCCCCCCCCCCCCChhhHHHHHhhhcccCCCCCCchhhh
Q 022360          105 RSLLLSLPLRKIIFTNADKVHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSDDEDDIAFVESAASTTTSANGPQIFDI  184 (298)
Q Consensus       105 ~~~L~~l~~~~~ivS~~~~~~~~~~l~~l~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  184 (298)
                      .+.|+..+++++|+||.+...++..++.+|+..+|+.                                           
T Consensus        55 l~~L~~~g~~~~ivTn~~~~~~~~~l~~lgl~~~~~~-------------------------------------------   91 (191)
T 3n1u_A           55 LKLLMAAGIQVAIITTAQNAVVDHRMEQLGITHYYKG-------------------------------------------   91 (191)
T ss_dssp             HHHHHHTTCEEEEECSCCSHHHHHHHHHHTCCEEECS-------------------------------------------
T ss_pred             HHHHHHCCCeEEEEeCcChHHHHHHHHHcCCccceeC-------------------------------------------
Confidence            4667778899999999999999999999998765531                                           


Q ss_pred             ccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHHcCCeEEEecCC-CCCCCCCEEeC
Q 022360          185 IGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTVLIGKS-QRVKGADYAFE  263 (298)
Q Consensus       185 ~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a~~aG~~~v~v~~~-~~~~~ad~i~~  263 (298)
                                          .||++.++..++++++++|++|++|||+.||+.+++.+|+.+++.+.. ..+..+++++.
T Consensus        92 --------------------~kpk~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~~~~ag~~~~~~~~~~~~~~~ad~v~~  151 (191)
T 3n1u_A           92 --------------------QVDKRSAYQHLKKTLGLNDDEFAYIGDDLPDLPLIQQVGLGVAVSNAVPQVLEFADWRTE  151 (191)
T ss_dssp             --------------------CSSCHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTTCCHHHHHHSSEECS
T ss_pred             --------------------CCChHHHHHHHHHHhCCCHHHEEEECCCHHHHHHHHHCCCEEEeCCccHHHHHhCCEEec
Confidence                                489999999999999999999999999999999999999998654332 23677899998


Q ss_pred             CH
Q 022360          264 SI  265 (298)
Q Consensus       264 s~  265 (298)
                      +.
T Consensus       152 ~~  153 (191)
T 3n1u_A          152 RT  153 (191)
T ss_dssp             SC
T ss_pred             CC
Confidence            83

>3skx_A Copper-exporting P-type ATPase B; P1B-ATPase, ATP binding domain, copper(II) transporter, MEMB protein, hydrolase; 1.59A {Archaeoglobus fulgidus} PDB: 3sky_A*

Probab=99.64  E-value=8.1e-17  Score=142.89  Aligned_cols=110  Identities=17%  Similarity=0.244  Sum_probs=87.2

Q ss_pred             CCChhHHHHHHhC---CCcEEEEeCCChHHHHHHHHHhCCCCccceeEeecCCCCCCCCCCCCChhhHHHHHhhhcccCC
Q 022360           99 KPDPVLRSLLLSL---PLRKIIFTNADKVHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSDDEDDIAFVESAASTTTS  175 (298)
Q Consensus        99 ~~~~g~~~~L~~l---~~~~~ivS~~~~~~~~~~l~~l~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  175 (298)
                      .++||+.++|+.|   +++++++|+.....++..++.+|+..+|+.+++.+                             
T Consensus       144 ~~~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~~~~~gl~~~f~~~~~~~-----------------------------  194 (280)
T 3skx_A          144 RIRPESREAISKLKAIGIKCMMLTGDNRFVAKWVAEELGLDDYFAEVLPHE-----------------------------  194 (280)
T ss_dssp             EECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCSEEECSCCGGG-----------------------------
T ss_pred             CCCHhHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCChhHhHhcCHHH-----------------------------
Confidence            5789999998877   47899999999999999999999999988776543                             


Q ss_pred             CCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHHcCCeEEEecC-CCC
Q 022360          176 ANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTVLIGK-SQR  254 (298)
Q Consensus       176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a~~aG~~~v~v~~-~~~  254 (298)
                                                      +....+...+.+     +|++|||+.||++|++.+|+.+++.+. ...
T Consensus       195 --------------------------------k~~~~k~~~~~~-----~~~~vGD~~nDi~~~~~Ag~~va~~~~~~~~  237 (280)
T 3skx_A          195 --------------------------------KAEKVKEVQQKY-----VTAMVGDGVNDAPALAQADVGIAIGAGTDVA  237 (280)
T ss_dssp             --------------------------------HHHHHHHHHTTS-----CEEEEECTTTTHHHHHHSSEEEECSCCSSSC
T ss_pred             --------------------------------HHHHHHHHHhcC-----CEEEEeCCchhHHHHHhCCceEEecCCcHHH
Confidence                                            223444444433     799999999999999999987776543 334


Q ss_pred             CCCCCEEe--CCHHHHHHHhHH
Q 022360          255 VKGADYAF--ESIHNIKEAIPE  274 (298)
Q Consensus       255 ~~~ad~i~--~s~~~l~~~l~~  274 (298)
                      +..+++++  +++++|.++|+.
T Consensus       238 ~~~a~~~~~~~~~~~l~~~l~~  259 (280)
T 3skx_A          238 VETADIVLVRNDPRDVAAIVEL  259 (280)
T ss_dssp             CCSSSEECSSCCTHHHHHHHHH
T ss_pred             HhhCCEEEeCCCHHHHHHHHHH
Confidence            67788888  889999888863

>3qgm_A P-nitrophenyl phosphatase (PHO2); structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 2.00A {Archaeoglobus fulgidus} SCOP: c.108.1.0

Probab=99.63  E-value=8e-17  Score=142.99  Aligned_cols=69  Identities=30%  Similarity=0.517  Sum_probs=62.2

Q ss_pred             CCCCHHHHHHHHHHcCCCCCcEEEEcCC-ccchHHHHHcCCeEEEecCCCCC----C--------CCCEEeCCHHHHHHH
Q 022360          205 CKPSELAIEKALKIASINPQRTLFFEDS-VRNIQAGKRVGLDTVLIGKSQRV----K--------GADYAFESIHNIKEA  271 (298)
Q Consensus       205 ~kp~~~~~~~~l~~l~i~p~~~i~iGDs-~~Di~~a~~aG~~~v~v~~~~~~----~--------~ad~i~~s~~~l~~~  271 (298)
                      +||++.+++.+++++|++|++|++|||+ .||+.||+.+|+.++++.++...    .        .|+++++++.+|.++
T Consensus       186 ~kp~~~~~~~~~~~~~~~~~~~~~vGD~~~~Di~~~~~~g~~~~~v~~g~~~~~~~~~~~~~~~~~~d~v~~~~~el~~~  265 (268)
T 3qgm_A          186 GKPSEVIMREALDILGLDAKDVAVVGDQIDVDVAAGKAIGAETVLVLTGVTTRENLDQMIERHGLKPDYVFNSLKDMVEA  265 (268)
T ss_dssp             STTSHHHHHHHHHHHTCCGGGEEEEESCTTTHHHHHHHHTCEEEEESSSSCCTTTHHHHHHHHTCCCSEEESSHHHHHHT
T ss_pred             CCCCHHHHHHHHHHhCCCchhEEEECCCchHHHHHHHHCCCcEEEECCCCCCHHHHHhhccccCCCCCEEECCHHHHHHH
Confidence            7999999999999999999999999999 59999999999999999877531    2        799999999999887


Q ss_pred             hH
Q 022360          272 IP  273 (298)
Q Consensus       272 l~  273 (298)
                      |+
T Consensus       266 l~  267 (268)
T 3qgm_A          266 LE  267 (268)
T ss_dssp             C-
T ss_pred             Hh
Confidence            64

>2r8e_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; YRBI, divalent metal, HAD superfamily, KDO 8-P, hydrolase; 1.40A {Escherichia coli O6} PDB: 2r8x_A 2r8y_A 2r8z_A 3hyc_A 3i6b_A*

Probab=99.63  E-value=3.6e-15  Score=126.45  Aligned_cols=112  Identities=17%  Similarity=0.220  Sum_probs=91.5

Q ss_pred             HHHHHHhCCCcEEEEeCCChHHHHHHHHHhCCCCccceeEeecCCCCCCCCCCCCChhhHHHHHhhhcccCCCCCCchhh
Q 022360          104 LRSLLLSLPLRKIIFTNADKVHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSDDEDDIAFVESAASTTTSANGPQIFD  183 (298)
Q Consensus       104 ~~~~L~~l~~~~~ivS~~~~~~~~~~l~~l~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  183 (298)
                      +.+.|+..+++++|+||.....++..++.+|+..+|+.                                          
T Consensus        61 ~l~~L~~~g~~v~ivT~~~~~~~~~~l~~lgl~~~~~~------------------------------------------   98 (188)
T 2r8e_A           61 GIRCALTSDIEVAIITGRKAKLVEDRCATLGITHLYQG------------------------------------------   98 (188)
T ss_dssp             HHHHHHTTTCEEEEECSSCCHHHHHHHHHHTCCEEECS------------------------------------------
T ss_pred             HHHHHHHCCCeEEEEeCCChHHHHHHHHHcCCceeecC------------------------------------------
Confidence            45667777899999999999999999999998765421                                          


Q ss_pred             hccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHHcCCeEEEecC-CCCCCCCCEEe
Q 022360          184 IIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTVLIGK-SQRVKGADYAF  262 (298)
Q Consensus       184 ~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a~~aG~~~v~v~~-~~~~~~ad~i~  262 (298)
                                           +||++..++.+++++|++|++|++|||+.+|+.+++.+|+.+++... ...+..+++++
T Consensus        99 ---------------------~kpk~~~~~~~~~~~g~~~~~~~~iGD~~~Di~~a~~ag~~~~~~~~~~~~~~~ad~v~  157 (188)
T 2r8e_A           99 ---------------------QSNKLIAFSDLLEKLAIAPENVAYVGDDLIDWPVMEKVGLSVAVADAHPLLIPRADYVT  157 (188)
T ss_dssp             ---------------------CSCSHHHHHHHHHHHTCCGGGEEEEESSGGGHHHHTTSSEEEECTTSCTTTGGGSSEEC
T ss_pred             ---------------------CCCCHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCEEEecCcCHHHHhcCCEEE
Confidence                                 59999999999999999999999999999999999999999876533 23356799999


Q ss_pred             CCHHH---HHHHhHHhhcc
Q 022360          263 ESIHN---IKEAIPELWES  278 (298)
Q Consensus       263 ~s~~~---l~~~l~~~~~~  278 (298)
                      .+..+   +.++++.++..
T Consensus       158 ~~~~~~g~~~~~l~~ll~~  176 (188)
T 2r8e_A          158 RIAGGRGAVREVCDLLLLA  176 (188)
T ss_dssp             SSCTTTTHHHHHHHHHHHH
T ss_pred             eCCCCCcHHHHHHHHHHHh
Confidence            99732   44666666543

>1q92_A 5(3)-deoxyribonucleotidase; alpha-beta rossman fold, hydrolase; HET: DRM; 1.40A {Homo sapiens} SCOP: c.108.1.8 PDB: 1mh9_A* 1q91_A* 1z4m_A* 1z4i_A* 1z4j_A* 1z4l_A* 1z4k_A* 1z4p_X* 1z4q_A* 2jau_A* 2jaw_A* 3u19_A* 3u13_A 4e88_A

Probab=99.62  E-value=2.4e-17  Score=140.54  Aligned_cols=175  Identities=14%  Similarity=0.108  Sum_probs=116.2

Q ss_pred             CccEEEEeCCCCccCCCccHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHhCCCHHH-HHHccCCCChhhHHHHhhc
Q 022360           13 KYDCLLFDLDDTLYPYSSGIAAACGQNIKDYMVEKLGIERSKIEDLGNLLYKNYGTTMAG-LRAIGYDFDYDDYHSFVHG   91 (298)
Q Consensus        13 ~~k~viFDlDGTL~d~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~   91 (298)
                      ++++|+|||||||+|+...+..++...+..+    ........          .+..... +..+. ....+.+.+.+.+
T Consensus         3 ~~k~viFDlDGTL~Ds~~~~~~~~~~~~~~~----~~~~~~~~----------~~~~~~~~~~~~~-~~~~~~~~~~~~~   67 (197)
T 1q92_A            3 RALRVLVDMDGVLADFEGGFLRKFRARFPDQ----PFIALEDR----------RGFWVSEQYGRLR-PGLSEKAISIWES   67 (197)
T ss_dssp             CCEEEEECSBTTTBCHHHHHHHHHHHHCTTS----CCCCGGGC----------CSSCHHHHHHHHS-TTHHHHHHHHHTS
T ss_pred             CceEEEEeCCCCCccCcHHHHHHHHHHHhcC----CCCCHHHh----------cCCcHHHHHHhcC-HHHHHHHHHHHHh
Confidence            4689999999999998777777776544332    01111110          0001100 00000 0011223333333


Q ss_pred             ccCCCCCCCChhHHHHHHhC----CCcEEEEeCCChHHHHHHHHHhCCCC-ccceeEeecCCCCCCCCCCCCChhhHHHH
Q 022360           92 RLPYENLKPDPVLRSLLLSL----PLRKIIFTNADKVHAVKVLSRLGLED-CFEGIICFETLNPTHKNTVSDDEDDIAFV  166 (298)
Q Consensus        92 ~~~~~~~~~~~g~~~~L~~l----~~~~~ivS~~~~~~~~~~l~~l~l~~-~f~~i~~~~~~~~~~~~~~~~~~~~~~~~  166 (298)
                      ........++||+.++|+.|    +++++|+||+....++..++++++.+ +|+                          
T Consensus        68 ~~~~~~~~~~~g~~e~L~~L~~~~g~~~~ivT~~~~~~~~~~l~~~~l~~~~f~--------------------------  121 (197)
T 1q92_A           68 KNFFFELEPLPGAVEAVKEMASLQNTDVFICTSPIKMFKYCPYEKYAWVEKYFG--------------------------  121 (197)
T ss_dssp             TTTTTTCCBCTTHHHHHHHHHHSTTEEEEEEECCCSCCSSHHHHHHHHHHHHHC--------------------------
T ss_pred             hhhhhcCCcCcCHHHHHHHHHhcCCCeEEEEeCCccchHHHHHHHhchHHHhch--------------------------
Confidence            22234578899999999887    46789999999888888999998877 774                          


Q ss_pred             HhhhcccCCCCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccc----hHHHH-H
Q 022360          167 ESAASTTTSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRN----IQAGK-R  241 (298)
Q Consensus       167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~D----i~~a~-~  241 (298)
                                                                    ..++++++++|++|++|||+..|    +.+|+ +
T Consensus       122 ----------------------------------------------~~~~~~l~~~~~~~~~vgDs~~dD~~~~~~a~~~  155 (197)
T 1q92_A          122 ----------------------------------------------PDFLEQIVLTRDKTVVSADLLIDDRPDITGAEPT  155 (197)
T ss_dssp             ----------------------------------------------GGGGGGEEECSCSTTSCCSEEEESCSCCCCSCSS
T ss_pred             ----------------------------------------------HHHHHHhccCCccEEEECcccccCCchhhhcccC
Confidence                                                          12456789999999999999999    99999 9


Q ss_pred             cCCeEEEecCCCCCC---CC-CEEeCCH-HHHHHHhHH
Q 022360          242 VGLDTVLIGKSQRVK---GA-DYAFESI-HNIKEAIPE  274 (298)
Q Consensus       242 aG~~~v~v~~~~~~~---~a-d~i~~s~-~~l~~~l~~  274 (298)
                      +|+.++++.++....   .+ ...+.++ .++..+|..
T Consensus       156 aG~~~i~~~~~~~~~~~~~~~~~~v~~~~~~l~~~l~~  193 (197)
T 1q92_A          156 PSWEHVLFTACHNQHLQLQPPRRRLHSWADDWKAILDS  193 (197)
T ss_dssp             CSSEEEEECCTTTTTCCCCTTCEEECCTTSCHHHHHHT
T ss_pred             CCceEEEecCcccccccccccchhhhhHHHHHHHHhcc
Confidence            999999997654322   22 3479998 478877764

>3dao_A Putative phosphatse; structural genomics, joint center for S genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE 1PE CIT; 1.80A {Eubacterium rectale}

Probab=99.62  E-value=6e-16  Score=139.13  Aligned_cols=72  Identities=11%  Similarity=0.162  Sum_probs=63.4

Q ss_pred             CCCCHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHHcCCeEEEecCCC-CCCCCCEEeCCHHH--HHHHhHHhh
Q 022360          205 CKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTVLIGKSQ-RVKGADYAFESIHN--IKEAIPELW  276 (298)
Q Consensus       205 ~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a~~aG~~~v~v~~~~-~~~~ad~i~~s~~~--l~~~l~~~~  276 (298)
                      +.+|+.+++.+++++|++++++++|||+.||++|++.+|++++|.+... .+..|++++.+.++  +.++|++++
T Consensus       209 ~~~K~~~l~~l~~~lgi~~~e~ia~GD~~NDi~ml~~ag~~vam~na~~~~k~~A~~v~~s~~edGv~~~l~~~l  283 (283)
T 3dao_A          209 GVSKWTALSYLIDRFDLLPDEVCCFGDNLNDIEMLQNAGISYAVSNARQEVIAAAKHTCAPYWENGVLSVLKSFL  283 (283)
T ss_dssp             TCCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEEETTSCHHHHHHSSEEECCGGGTHHHHHHHHTC
T ss_pred             CCcHHHHHHHHHHHhCCCHHHEEEECCCHHHHHHHHhCCCEEEcCCCCHHHHHhcCeECCCCCCChHHHHHHHhC
Confidence            5788999999999999999999999999999999999998888765433 47889999999887  888887753

>2rbk_A Putative uncharacterized protein; HAD-like phosphatase, unknown function; 1.00A {Bacteroides thetaiotaomicron} SCOP: c.108.1.10 PDB: 1ymq_A 2rb5_A 2rav_A 2rar_A

Probab=99.62  E-value=5.3e-17  Score=144.14  Aligned_cols=71  Identities=17%  Similarity=0.267  Sum_probs=61.6

Q ss_pred             CCCCHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHHcCCeEEEecCCC-CCCCCCEEeCCHHH--HHHHhHHh
Q 022360          205 CKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTVLIGKSQ-RVKGADYAFESIHN--IKEAIPEL  275 (298)
Q Consensus       205 ~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a~~aG~~~v~v~~~~-~~~~ad~i~~s~~~--l~~~l~~~  275 (298)
                      ++||+.+++.+++++|+++++|++|||+.||+.|++.+|+.+++.+... .+..|++++.+.++  +.++|+++
T Consensus       185 ~~~K~~~~~~~~~~~~~~~~~~~~iGD~~nD~~~~~~ag~~v~~~n~~~~~~~~a~~v~~~~~~dGv~~~l~~~  258 (261)
T 2rbk_A          185 GDTKQKGIDEIIRHFGIKLEETMSFGDGGNDISMLRHAAIGVAMGQAKEDVKAAADYVTAPIDEDGISKAMKHF  258 (261)
T ss_dssp             TCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHHHSSEECCCGGGTHHHHHHHHH
T ss_pred             CCChHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHcCceEEecCccHHHHhhCCEEeccCchhhHHHHHHHh
Confidence            6999999999999999999999999999999999999999777642221 25679999999999  99988775

>2i7d_A 5'(3')-deoxyribonucleotidase, cytosolic type; hydrolase; HET: DUR; 1.20A {Homo sapiens} PDB: 2jar_A* 2jao_A*

Probab=99.61  E-value=4.6e-17  Score=138.28  Aligned_cols=170  Identities=12%  Similarity=0.092  Sum_probs=112.6

Q ss_pred             ccEEEEeCCCCccCCCccHHHHHHHHHHHHHHHHhCCC---hhHHHHH-HHHHHHHhCCCHHHHHHccCCCChhhHHHHh
Q 022360           14 YDCLLFDLDDTLYPYSSGIAAACGQNIKDYMVEKLGIE---RSKIEDL-GNLLYKNYGTTMAGLRAIGYDFDYDDYHSFV   89 (298)
Q Consensus        14 ~k~viFDlDGTL~d~~~~~~~~~~~~~~~~~~~~~g~~---~~~~~~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~   89 (298)
                      .++|+|||||||+|+...+..++...+.       |++   ....... ....+...           .....+.+.+.+
T Consensus         2 ~k~viFDlDGTL~Ds~~~~~~~~~~~~~-------g~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~   63 (193)
T 2i7d_A            2 SVRVLVDMDGVLADFEAGLLRGFRRRFP-------EEPHVPLEQRRGFLAREQYRAL-----------RPDLADKVASVY   63 (193)
T ss_dssp             CEEEEECSBTTTBCHHHHHHHHHHHHST-------TSCCCCGGGCCSSCHHHHHHHH-----------CTTHHHHHHHHH
T ss_pred             CcEEEEECCCcCccchhHHHHHHHHHhc-------CCCCCCHHHHHHhhHHHHHHHH-----------hHHHHHHHHHHH
Confidence            4799999999999987777766664221       432   1110000 00111111           111123344444


Q ss_pred             hcccCCCCCCCChhHHHHHHhCC----CcEEEEeCCChHHHHHHHHHhCCCCccceeEeecCCCCCCCCCCCCChhhHHH
Q 022360           90 HGRLPYENLKPDPVLRSLLLSLP----LRKIIFTNADKVHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSDDEDDIAF  165 (298)
Q Consensus        90 ~~~~~~~~~~~~~g~~~~L~~l~----~~~~ivS~~~~~~~~~~l~~l~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~  165 (298)
                      .+........++||+.++|+.|+    ++++|+||+....++..++++|+   |+.++++                    
T Consensus        64 ~~~~~~~~~~~~~g~~e~L~~L~~~~g~~~~ivT~~~~~~~~~~l~~~gl---f~~i~~~--------------------  120 (193)
T 2i7d_A           64 EAPGFFLDLEPIPGALDAVREMNDLPDTQVFICTSPLLKYHHCVGEKYRW---VEQHLGP--------------------  120 (193)
T ss_dssp             TSTTTTTTCCBCTTHHHHHHHHHTSTTEEEEEEECCCSSCTTTHHHHHHH---HHHHHCH--------------------
T ss_pred             HhcCccccCccCcCHHHHHHHHHhCCCCeEEEEeCCChhhHHHHHHHhCc---hhhhcCH--------------------
Confidence            43322346788999999998873    57899999998888999999887   6665521                    


Q ss_pred             HHhhhcccCCCCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccc----hHHHH-
Q 022360          166 VESAASTTTSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRN----IQAGK-  240 (298)
Q Consensus       166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~D----i~~a~-  240 (298)
                                                                      .+++++|++|++|++|||+.+|    +.+|+ 
T Consensus       121 ------------------------------------------------~~~~~~~~~~~~~~~vgDs~~dD~~~i~~A~~  152 (193)
T 2i7d_A          121 ------------------------------------------------QFVERIILTRDKTVVLGDLLIDDKDTVRGQEE  152 (193)
T ss_dssp             ------------------------------------------------HHHTTEEECSCGGGBCCSEEEESSSCCCSSCS
T ss_pred             ------------------------------------------------HHHHHcCCCcccEEEECCchhhCcHHHhhccc
Confidence                                                            2678899999999999999998    99999 


Q ss_pred             HcCCeEEEecCCCCCC---CCCE-EeCCH-HHHHHHh
Q 022360          241 RVGLDTVLIGKSQRVK---GADY-AFESI-HNIKEAI  272 (298)
Q Consensus       241 ~aG~~~v~v~~~~~~~---~ad~-i~~s~-~~l~~~l  272 (298)
                      ++|+.++++.++....   .+++ .+.++ +++.++|
T Consensus       153 ~aG~~~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~  189 (193)
T 2i7d_A          153 TPSWEHILFTCCHNRHLVLPPTRRRLLSWSDNWREIL  189 (193)
T ss_dssp             SCSSEEEEECCGGGTTCCCCTTSCEECSTTSCHHHHH
T ss_pred             ccccceEEEEeccCcccccccchHHHhhHHHHHHHHh
Confidence            9999999997654321   2344 68887 4455544

>2pq0_A Hypothetical conserved protein GK1056; hyopthetical protein, structural genomics, unknown function; 2.60A {Geobacillus kaustophilus} PDB: 2qyh_A

Probab=99.60  E-value=4e-16  Score=137.95  Aligned_cols=72  Identities=15%  Similarity=0.187  Sum_probs=61.4

Q ss_pred             CCCCHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHHcCCeEEEecCCC-CCCCCCEEeCCHHH--HHHHhHHhh
Q 022360          205 CKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTVLIGKSQ-RVKGADYAFESIHN--IKEAIPELW  276 (298)
Q Consensus       205 ~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a~~aG~~~v~v~~~~-~~~~ad~i~~s~~~--l~~~l~~~~  276 (298)
                      +-+|..+++.+++++|+++++|++|||+.||++|++.+|++++|.+... .+..|++++.+.++  +.++|+++.
T Consensus       181 ~~~K~~~l~~l~~~lgi~~~~~ia~GDs~NDi~ml~~ag~~vam~na~~~~k~~A~~v~~~~~~dGva~~i~~~~  255 (258)
T 2pq0_A          181 GGSKAEGIRMMIEKLGIDKKDVYAFGDGLNDIEMLSFVGTGVAMGNAHEEVKRVADFVTKPVDKEGIWYGLKQLQ  255 (258)
T ss_dssp             SCCHHHHHHHHHHHHTCCGGGEEEECCSGGGHHHHHHSSEEEEETTCCHHHHHTCSEEECCGGGTHHHHHHHHTT
T ss_pred             CCChHHHHHHHHHHhCCCHHHEEEECCcHHhHHHHHhCCcEEEeCCCcHHHHHhCCEEeCCCCcchHHHHHHHhC
Confidence            4778899999999999999999999999999999999999988753222 36779999998876  888887653

>2b82_A APHA, class B acid phosphatase; DDDD acid phosphatase, metallo-ENZ hydrolase; HET: ADN; 1.25A {Escherichia coli} SCOP: c.108.1.12 PDB: 2b8j_A* 2hf7_A 1rmt_A* 1n9k_A 1rmq_A 1n8n_A* 1rmy_A* 2g1a_A* 3cz4_A 2heg_A* 1z5g_A 1z5u_A* 1z88_A 2aut_A

Probab=99.60  E-value=1.1e-16  Score=138.67  Aligned_cols=98  Identities=21%  Similarity=0.195  Sum_probs=74.8

Q ss_pred             CCChhHHHHHHhC---CCcEEEEeCCChHHHHHHHHHhCCCCccceeEeecCCCCCCCCCCCCChhhHHHHHhhhcccCC
Q 022360           99 KPDPVLRSLLLSL---PLRKIIFTNADKVHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSDDEDDIAFVESAASTTTS  175 (298)
Q Consensus        99 ~~~~g~~~~L~~l---~~~~~ivS~~~~~~~~~~l~~l~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  175 (298)
                      .+.|++.++|+.|   +++++|+||+.....+..++.  +.++|+.++.+.+...                         
T Consensus        88 ~~~~~~~e~l~~L~~~G~~l~ivTn~~~~~~~~~l~~--l~~~f~~i~~~~~~~~-------------------------  140 (211)
T 2b82_A           88 IPKEVARQLIDMHVRRGDAIFFVTGRSPTKTETVSKT--LADNFHIPATNMNPVI-------------------------  140 (211)
T ss_dssp             EECHHHHHHHHHHHHHTCEEEEEECSCCCSSCCHHHH--HHHHTTCCTTTBCCCE-------------------------
T ss_pred             CCcHHHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHH--HHHhcCccccccchhh-------------------------
Confidence            3578898888877   478999999877666666665  4566766532211000                         


Q ss_pred             CCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHHcCCeEEEecCCC
Q 022360          176 ANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTVLIGKSQ  253 (298)
Q Consensus       176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a~~aG~~~v~v~~~~  253 (298)
                                            ..    ..||+|+.+..+++++|+    |++|||+.+|+++|+++|+.++++.++.
T Consensus       141 ----------------------~~----~~KP~p~~~~~~~~~~g~----~l~VGDs~~Di~aA~~aG~~~i~v~~g~  188 (211)
T 2b82_A          141 ----------------------FA----GDKPGQNTKSQWLQDKNI----RIFYGDSDNDITAARDVGARGIRILRAS  188 (211)
T ss_dssp             ----------------------EC----CCCTTCCCSHHHHHHTTE----EEEEESSHHHHHHHHHTTCEEEECCCCT
T ss_pred             ----------------------hc----CCCCCHHHHHHHHHHCCC----EEEEECCHHHHHHHHHCCCeEEEEecCC
Confidence                                  00    169999999999999998    9999999999999999999999997765

>3pgv_A Haloacid dehalogenase-like hydrolase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: EPE; 2.39A {Klebsiella pneumoniae subsp}

Probab=99.59  E-value=1.6e-16  Score=142.95  Aligned_cols=72  Identities=13%  Similarity=0.123  Sum_probs=61.1

Q ss_pred             CCCCHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHHcCCeEEEecCCC-CCCCCC--EEeCCHHH--HHHHhHHhh
Q 022360          205 CKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTVLIGKSQ-RVKGAD--YAFESIHN--IKEAIPELW  276 (298)
Q Consensus       205 ~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a~~aG~~~v~v~~~~-~~~~ad--~i~~s~~~--l~~~l~~~~  276 (298)
                      +.+|+.+++.+++++|++++++++|||+.||++|++.+|++++|.+... .+..|+  +++.+.++  +.++|++++
T Consensus       207 ~~~K~~al~~l~~~lgi~~~~~ia~GD~~NDi~ml~~ag~~vAm~Na~~~vk~~A~~~~v~~sn~edGva~~i~~~~  283 (285)
T 3pgv_A          207 GVSKGHALEAVAKMLGYTLSDCIAFGDGMNDAEMLSMAGKGCIMANAHQRLKDLHPELEVIGSNADDAVPRYLRKLY  283 (285)
T ss_dssp             TCSHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHHHCTTSEECCCGGGTHHHHHHHHHH
T ss_pred             CCChHHHHHHHHHHhCCCHHHEEEECCcHhhHHHHHhcCCEEEccCCCHHHHHhCCCCEecccCCcchHHHHHHHHh
Confidence            5788999999999999999999999999999999999998888775544 366676  47777766  888888765

>3r4c_A Hydrolase, haloacid dehalogenase-like hydrolase; haloalkanoate dehalogenase enzyme superfamily, phosphohydrol hydrolase; 1.82A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0

Probab=99.57  E-value=3.9e-16  Score=138.56  Aligned_cols=71  Identities=13%  Similarity=0.166  Sum_probs=62.2

Q ss_pred             CCCCHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHHcCCeEEEecCCC-CCCCCCEEeCCHHH--HHHHhHHh
Q 022360          205 CKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTVLIGKSQ-RVKGADYAFESIHN--IKEAIPEL  275 (298)
Q Consensus       205 ~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a~~aG~~~v~v~~~~-~~~~ad~i~~s~~~--l~~~l~~~  275 (298)
                      +.+|+.+++.+++++|++++++++|||+.||++|++.+|++++|.+... .+..|++++.+.++  +.++|+++
T Consensus       192 ~~~K~~~l~~l~~~lgi~~~~~ia~GD~~NDi~m~~~ag~~vam~na~~~~k~~Ad~v~~~~~edGv~~~l~~~  265 (268)
T 3r4c_A          192 GTSKATGLSLFADYYRVKVSEIMACGDGGNDIPMLKAAGIGVAMGNASEKVQSVADFVTDTVDNSGLYKALKHF  265 (268)
T ss_dssp             TCCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHHTCSEECCCTTTTHHHHHHHHT
T ss_pred             CCCHHHHHHHHHHHcCCCHHHEEEECCcHHhHHHHHhCCCeEEeCCCcHHHHHhcCEeeCCCCcCHHHHHHHHh
Confidence            5888999999999999999999999999999999999999888765443 47789999999776  88888765

>3ewi_A N-acylneuraminate cytidylyltransferase; beta barrel, HAD-like, rossmannoid fold, nucleotidyltransferase, nucleus; 1.90A {Mus musculus}

Probab=99.55  E-value=1e-14  Score=122.12  Aligned_cols=108  Identities=18%  Similarity=0.179  Sum_probs=84.5

Q ss_pred             HHHHHHhCCCcEEEEeCCChHHHHHHHH--HhCCCCccceeEeecCCCCCCCCCCCCChhhHHHHHhhhcccCCCCCCch
Q 022360          104 LRSLLLSLPLRKIIFTNADKVHAVKVLS--RLGLEDCFEGIICFETLNPTHKNTVSDDEDDIAFVESAASTTTSANGPQI  181 (298)
Q Consensus       104 ~~~~L~~l~~~~~ivS~~~~~~~~~~l~--~l~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  181 (298)
                      ..+.|+..+++++|+|+.  ..++..++  .+++. +    +.    +                                
T Consensus        44 ~L~~Lk~~Gi~~~I~Tg~--~~~~~~l~~l~lgi~-~----~~----g--------------------------------   80 (168)
T 3ewi_A           44 GISLLKKSGIEVRLISER--ACSKQTLSALKLDCK-T----EV----S--------------------------------   80 (168)
T ss_dssp             HHHHHHHTTCEEEEECSS--CCCHHHHHTTCCCCC-E----EC----S--------------------------------
T ss_pred             HHHHHHHCCCEEEEEeCc--HHHHHHHHHhCCCcE-E----EE----C--------------------------------
Confidence            356788888999999999  66788888  44543 2    21    1                                


Q ss_pred             hhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHHcCCeEEEecC-CCCCCCCCE
Q 022360          182 FDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTVLIGK-SQRVKGADY  260 (298)
Q Consensus       182 ~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a~~aG~~~v~v~~-~~~~~~ad~  260 (298)
                                             +++|+..+..+++++|++|++|++|||+.||+.|++.+|+.+++.+. ...+..+++
T Consensus        81 -----------------------~~~K~~~l~~~~~~~gi~~~~~~~vGD~~nDi~~~~~ag~~~a~~na~~~~k~~Ad~  137 (168)
T 3ewi_A           81 -----------------------VSDKLATVDEWRKEMGLCWKEVAYLGNEVSDEECLKRVGLSAVPADACSGAQKAVGY  137 (168)
T ss_dssp             -----------------------CSCHHHHHHHHHHHTTCCGGGEEEECCSGGGHHHHHHSSEEEECTTCCHHHHTTCSE
T ss_pred             -----------------------CCChHHHHHHHHHHcCcChHHEEEEeCCHhHHHHHHHCCCEEEeCChhHHHHHhCCE
Confidence                                   47889999999999999999999999999999999999999775432 234888999


Q ss_pred             EeCCHHH---HHHHhHHhhc
Q 022360          261 AFESIHN---IKEAIPELWE  277 (298)
Q Consensus       261 i~~s~~~---l~~~l~~~~~  277 (298)
                      ++.+..+   +.++++.++.
T Consensus       138 v~~~~~~~G~~~~~~~~il~  157 (168)
T 3ewi_A          138 ICKCSGGRGAIREFAEHIFL  157 (168)
T ss_dssp             ECSSCTTTTHHHHHHHHHHH
T ss_pred             EeCCCCCccHHHHHHHHHHH
Confidence            9987543   5566666554

>1rlm_A Phosphatase; HAD family, rossman fold, hydrolase; 1.90A {Escherichia coli} SCOP: c.108.1.10 PDB: 1rlt_A 1rlo_A* 2hf2_A

Probab=99.55  E-value=3.5e-15  Score=133.33  Aligned_cols=73  Identities=16%  Similarity=0.127  Sum_probs=62.1

Q ss_pred             CCCCHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHHcCCeEEEecCCC-CCCCCCEEeCCHHH--HHHHhHHhhc
Q 022360          205 CKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTVLIGKSQ-RVKGADYAFESIHN--IKEAIPELWE  277 (298)
Q Consensus       205 ~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a~~aG~~~v~v~~~~-~~~~ad~i~~s~~~--l~~~l~~~~~  277 (298)
                      +++|+.+++.+++++|+++++|++|||+.||++|++.+|+.+++.+... .+..|++++.+.++  +.++|++++.
T Consensus       189 ~~~K~~~~~~l~~~l~i~~~~~~~~GD~~nD~~m~~~ag~~va~~na~~~~k~~a~~v~~~~~~dGVa~~l~~~~~  264 (271)
T 1rlm_A          189 GLHKANGISRLLKRWDLSPQNVVAIGDSGNDAEMLKMARYSFAMGNAAENIKQIARYATDDNNHEGALNVIQAVLD  264 (271)
T ss_dssp             TCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHCSEEEECTTCCHHHHHHCSEECCCGGGTHHHHHHHHHHH
T ss_pred             CCChHHHHHHHHHHhCCCHHHEEEECCcHHHHHHHHHcCCeEEeCCccHHHHHhCCeeCcCCCCChHHHHHHHHHh
Confidence            5899999999999999999999999999999999999999776433222 25679999999876  8888888764

>3bwv_A Putative 5'(3')-deoxyribonucleotidase; NP_764060.1, deoxyribonucleotidase-like protein; HET: MSE; 1.55A {Staphylococcus epidermidis}

Probab=99.55  E-value=3.4e-14  Score=118.98  Aligned_cols=166  Identities=13%  Similarity=0.132  Sum_probs=103.9

Q ss_pred             ccEEEEeCCCCccCCCccHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHhCCCHHHHHHccCCCChhhHHHHhhccc
Q 022360           14 YDCLLFDLDDTLYPYSSGIAAACGQNIKDYMVEKLGIERSKIEDLGNLLYKNYGTTMAGLRAIGYDFDYDDYHSFVHGRL   93 (298)
Q Consensus        14 ~k~viFDlDGTL~d~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~   93 (298)
                      +++|+|||||||+|+...+..++.+        .+|.+.....      .  .|......  ++  ...+.+.+......
T Consensus         4 ~~~viFD~DGtL~Ds~~~~~~~~~~--------~~g~~~~~~~------~--~g~~~~~~--~~--~~~~~~~~~~~~~~   63 (180)
T 3bwv_A            4 RQRIAIDMDEVLADTLGAVVKAVNE--------RADLNIKMES------L--NGKKLKHM--IP--EHEGLVMDILKEPG   63 (180)
T ss_dssp             CCEEEEETBTTTBCHHHHHHHHHHH--------HSCCCCCGGG------C--TTCCC------------CHHHHHHHSTT
T ss_pred             ccEEEEeCCCcccccHHHHHHHHHH--------HhCCCCCHHH------H--cCccHHHH--CC--chHHHHHHHHhCcc
Confidence            5899999999999977766665542        4455322110      0  02111111  11  11223333332222


Q ss_pred             CCCCCCCChhHHHHHHhCC--CcEEEEeCC---ChHH--HHHHHHH-hCCCCccceeEeecCCCCCCCCCCCCChhhHHH
Q 022360           94 PYENLKPDPVLRSLLLSLP--LRKIIFTNA---DKVH--AVKVLSR-LGLEDCFEGIICFETLNPTHKNTVSDDEDDIAF  165 (298)
Q Consensus        94 ~~~~~~~~~g~~~~L~~l~--~~~~ivS~~---~~~~--~~~~l~~-l~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~  165 (298)
                      ......++||+.++|+.|+  ++++|+||+   ....  ....+.. ++...+|+.+++.++                  
T Consensus        64 ~~~~~~~~pg~~e~L~~L~~~~~~~i~T~~~~~~~~~~~~~~~l~~~f~~~~~~~~i~~~~~------------------  125 (180)
T 3bwv_A           64 FFRNLDVMPHAQEVVKQLNEHYDIYIATAAMDVPTSFHDKYEWLLEYFPFLDPQHFVFCGRK------------------  125 (180)
T ss_dssp             GGGSCCBCTTHHHHHHHHTTTSEEEEEECC--CCSHHHHHHHHHHHHCTTSCGGGEEECSCG------------------
T ss_pred             hhccCCCCcCHHHHHHHHHhcCCEEEEeCCCCcchHHHHHHHHHHHHcCCCCcccEEEeCCc------------------
Confidence            2346789999999999985  679999998   3222  2334444 566667777775431                  


Q ss_pred             HHhhhcccCCCCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHHcCCe
Q 022360          166 VESAASTTTSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLD  245 (298)
Q Consensus       166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a~~aG~~  245 (298)
                                                             .            ++    ++|++|||+.+|+.  .++| .
T Consensus       126 ---------------------------------------~------------~l----~~~l~ieDs~~~i~--~aaG-~  147 (180)
T 3bwv_A          126 ---------------------------------------N------------II----LADYLIDDNPKQLE--IFEG-K  147 (180)
T ss_dssp             ---------------------------------------G------------GB----CCSEEEESCHHHHH--HCSS-E
T ss_pred             ---------------------------------------C------------ee----cccEEecCCcchHH--HhCC-C
Confidence                                                   0            11    67999999999985  5689 9


Q ss_pred             EEEecCCCC-CCCCCEEeCCHHHHHHHhHHh
Q 022360          246 TVLIGKSQR-VKGADYAFESIHNIKEAIPEL  275 (298)
Q Consensus       246 ~v~v~~~~~-~~~ad~i~~s~~~l~~~l~~~  275 (298)
                      ++++.++.. ...+++++.++.+|...|.++
T Consensus       148 ~i~~~~~~~~~~~~~~~i~~~~el~~~l~~~  178 (180)
T 3bwv_A          148 SIMFTASHNVYEHRFERVSGWRDVKNYFNSI  178 (180)
T ss_dssp             EEEECCGGGTTCCSSEEECSHHHHHHHHHHH
T ss_pred             eEEeCCCcccCCCCceecCCHHHHHHHHHHh
Confidence            999876543 356889999999999888665

>3zvl_A Bifunctional polynucleotide phosphatase/kinase; hydrolase-transferase complex, base excision repair, BER, non-homologous END-joining, NHEJ; 1.65A {Mus musculus} PDB: 3zvm_A* 3zvn_A* 1yj5_A 3u7e_B* 3u7f_B* 3u7h_B* 3u7g_A*

Probab=99.54  E-value=1.5e-14  Score=137.59  Aligned_cols=94  Identities=23%  Similarity=0.255  Sum_probs=81.2

Q ss_pred             CChhHHHHHHhC---CCcEEEEeCCC------------hHHHHHHHHHhCCCCccceeEeecCCCCCCCCCCCCChhhHH
Q 022360          100 PDPVLRSLLLSL---PLRKIIFTNAD------------KVHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSDDEDDIA  164 (298)
Q Consensus       100 ~~~g~~~~L~~l---~~~~~ivS~~~------------~~~~~~~l~~l~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~  164 (298)
                      ++||+.++|+.|   +++++|+||..            ...+...++.+|+.  |+.++++++...              
T Consensus        88 ~~pgv~e~L~~L~~~G~~l~IvTN~~gi~~g~~~~~~~~~~~~~~l~~lgl~--fd~i~~~~~~~~--------------  151 (416)
T 3zvl_A           88 LYPEIPKKLQELAAEGYKLVIFTNQMGIGRGKLPAEVFKGKVEAVLEKLGVP--FQVLVATHAGLN--------------  151 (416)
T ss_dssp             SCTTHHHHHHHHHHTTCEEEEEEECHHHHTTSSCHHHHHHHHHHHHHHHTSC--CEEEEECSSSTT--------------
T ss_pred             hcccHHHHHHHHHHCCCeEEEEeCCccccCCCCCHHHHHHHHHHHHHHcCCC--EEEEEECCCCCC--------------
Confidence            678999888887   48899999965            22367888999985  899998887664              


Q ss_pred             HHHhhhcccCCCCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcC----CCCCcEEEEcCCc-------
Q 022360          165 FVESAASTTTSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIAS----INPQRTLFFEDSV-------  233 (298)
Q Consensus       165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~----i~p~~~i~iGDs~-------  233 (298)
                                                              +||+|.+|..+++++|    ++|++|+||||+.       
T Consensus       152 ----------------------------------------~KP~p~~~~~a~~~l~~~~~v~~~~~l~VGDs~gr~~~~~  191 (416)
T 3zvl_A          152 ----------------------------------------RKPVSGMWDHLQEQANEGIPISVEDSVFVGDAAGRLANWA  191 (416)
T ss_dssp             ----------------------------------------STTSSHHHHHHHHHSSTTCCCCGGGCEEECSCSCBCTTSS
T ss_pred             ----------------------------------------CCCCHHHHHHHHHHhCCCCCCCHHHeEEEECCCCCccccc
Confidence                                                    7999999999999998    9999999999997       


Q ss_pred             ----------cchHHHHHcCCeEEEe
Q 022360          234 ----------RNIQAGKRVGLDTVLI  249 (298)
Q Consensus       234 ----------~Di~~a~~aG~~~v~v  249 (298)
                                +|+.+|+++|+.++..
T Consensus       192 ~~~~~~d~s~~Di~~A~~aGi~f~~p  217 (416)
T 3zvl_A          192 PGRKKKDFSCADRLFALNVGLPFATP  217 (416)
T ss_dssp             TTCCSCCSCCHHHHHHHHHTCCEECH
T ss_pred             ccccccCCChhhHHHHHHcCCcccCc
Confidence                      8999999999998754

>2yj3_A Copper-transporting ATPase; hydrolase, P-type ATPase, COPB, heavy metal translocation; 2.20A {Sulfolobus solfataricus} PDB: 2iye_A 2yj6_A* 2yj5_A* 2yj4_A*

Probab=99.28  E-value=8.9e-16  Score=137.17  Aligned_cols=112  Identities=16%  Similarity=0.207  Sum_probs=91.9

Q ss_pred             CCCCChhHHHHHHhCC---CcEEEEeCCChHHHHHHHHHhCCCCccceeEeecCCCCCCCCCCCCChhhHHHHHhhhccc
Q 022360           97 NLKPDPVLRSLLLSLP---LRKIIFTNADKVHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSDDEDDIAFVESAASTT  173 (298)
Q Consensus        97 ~~~~~~g~~~~L~~l~---~~~~ivS~~~~~~~~~~l~~l~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  173 (298)
                      ...++||+.++|+.|+   ++++++|+.....++.+++++|+.++|+.++.                             
T Consensus       134 ~~~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~~~~~gl~~~f~~~~p-----------------------------  184 (263)
T 2yj3_A          134 SDVPRPNLKDYLEKLKNEGLKIIILSGDKEDKVKELSKELNIQEYYSNLSP-----------------------------  184 (263)
Confidence            3467899999999885   67899999999999999999999888876651                             


Q ss_pred             CCCCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHHcCCeEEEecC-C
Q 022360          174 TSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTVLIGK-S  252 (298)
Q Consensus       174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a~~aG~~~v~v~~-~  252 (298)
                                                          ..+..++++++.+|++|+||||+.||+.+++.+|+.+++... .
T Consensus       185 ------------------------------------~~k~~~~~~l~~~~~~~~~VGD~~~D~~aa~~Agv~va~g~~~~  228 (263)
T 2yj3_A          185 ------------------------------------EDKVRIIEKLKQNGNKVLMIGDGVNDAAALALADVSVAMGNGVD  228 (263)
Confidence                                                234667888899999999999999999999999988776532 2


Q ss_pred             CCCCCCCEEe--CCHHHHHHHhH
Q 022360          253 QRVKGADYAF--ESIHNIKEAIP  273 (298)
Q Consensus       253 ~~~~~ad~i~--~s~~~l~~~l~  273 (298)
                      .....+|+++  +++.+|.++|.
T Consensus       229 ~~~~~ad~v~~~~~l~~l~~~l~  251 (263)
T 2yj3_A          229 ISKNVADIILVSNDIGTLLGLIK  251 (263)
Confidence            3466789999  88888877653

>1nrw_A Hypothetical protein, haloacid dehalogenase-like hydrolase; structural genomics, PSI, protein structure initiative; 1.70A {Bacillus subtilis} SCOP: c.108.1.10

Probab=99.43  E-value=7.3e-14  Score=125.76  Aligned_cols=70  Identities=16%  Similarity=0.126  Sum_probs=58.3

Q ss_pred             CCCCHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHHcCCeEEEecCCC--CCCCCCEEeCCHHH--HHHHhHHh
Q 022360          205 CKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTVLIGKSQ--RVKGADYAFESIHN--IKEAIPEL  275 (298)
Q Consensus       205 ~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a~~aG~~~v~v~~~~--~~~~ad~i~~s~~~--l~~~l~~~  275 (298)
                      +-+|+.+++.+++++|+++++|++|||+.||++|++.+|+.++ ++++.  .+..|++++.+.++  +.++|+++
T Consensus       214 ~~~K~~~~~~~~~~~~~~~~~~~~~GD~~nD~~m~~~ag~~va-~~~~~~~~~~~a~~v~~~~~~dGVa~~i~~~  287 (288)
T 1nrw_A          214 KASKGQALKRLAKQLNIPLEETAAVGDSLNDKSMLEAAGKGVA-MGNAREDIKSIADAVTLTNDEHGVAHMMKHL  287 (288)
T ss_dssp             TCSHHHHHHHHHHHTTCCGGGEEEEESSGGGHHHHHHSSEEEE-CTTCCHHHHHHCSEECCCGGGTHHHHHHHHT
T ss_pred             CCChHHHHHHHHHHhCCCHHHEEEEcCCHHHHHHHHHcCcEEE-EcCCCHHHHhhCceeecCCCcChHHHHHHHh
Confidence            4788899999999999999999999999999999999999655 44433  25568999998776  77777664

>1rkq_A Hypothetical protein YIDA; two domain structure with beta-alpha sandwich. stucture contains A magnesium ION., PSI, protein structure initiative; 1.40A {Escherichia coli} SCOP: c.108.1.10

Probab=99.42  E-value=2.8e-14  Score=128.33  Aligned_cols=73  Identities=12%  Similarity=0.139  Sum_probs=60.5

Q ss_pred             CCCCHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHHcCCeEEEecCCC--CCCCCCEEeCCHHH--HHHHhHHhhcc
Q 022360          205 CKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTVLIGKSQ--RVKGADYAFESIHN--IKEAIPELWES  278 (298)
Q Consensus       205 ~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a~~aG~~~v~v~~~~--~~~~ad~i~~s~~~--l~~~l~~~~~~  278 (298)
                      +-+|+.+++.+++++|++++++++|||+.||+.|++.+|+.+++ +.+.  .+..|++++.+.++  +.++|++++..
T Consensus       196 ~~~K~~~l~~l~~~~~~~~~~~~~~GD~~nD~~m~~~ag~~va~-~n~~~~~~~~a~~v~~~~~~dGV~~~l~~~~~~  272 (282)
T 1rkq_A          196 RVNKGTGVKSLADVLGIKPEEIMAIGDQENDIAMIEYAGVGVAV-DNAIPSVKEVANFVTKSNLEDGVAFAIEKYVLN  272 (282)
T ss_dssp             TCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEEC-TTSCHHHHHHCSEECCCTTTTHHHHHHHHHTTC
T ss_pred             CCCCHHHHHHHHHHhCCCHHHEEEECCcHHHHHHHHHCCcEEEe-cCCcHHHHhhCCEEecCCCcchHHHHHHHHHhc
Confidence            47888999999999999999999999999999999999986554 3332  24579999988665  88888887543

>1l6r_A Hypothetical protein TA0175; structural genomics, putative hydrolas midwest center for structural genomics, MCSG, PSI; 1.40A {Thermoplasma acidophilum} SCOP: c.108.1.10 PDB: 1kyt_A

Probab=99.41  E-value=2e-13  Score=119.26  Aligned_cols=71  Identities=11%  Similarity=0.063  Sum_probs=58.8

Q ss_pred             CCCCHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHHcCCeEEEecCCC--CCCCCCEEeCCHHH--HHHHhHHhh
Q 022360          205 CKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTVLIGKSQ--RVKGADYAFESIHN--IKEAIPELW  276 (298)
Q Consensus       205 ~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a~~aG~~~v~v~~~~--~~~~ad~i~~s~~~--l~~~l~~~~  276 (298)
                      +.+|+.+++.++++++++++++++|||+.||++|++.+|+.+++ +.+.  .+..|++++.+.++  +.++|++++
T Consensus       151 ~~~K~~~l~~l~~~~~~~~~~~~~iGD~~nD~~m~~~ag~~va~-~n~~~~~k~~a~~v~~~~~~~Gv~~~l~~~~  225 (227)
T 1l6r_A          151 GEDKAFAVNKLKEMYSLEYDEILVIGDSNNDMPMFQLPVRKACP-ANATDNIKAVSDFVSDYSYGEEIGQIFKHFE  225 (227)
T ss_dssp             TCSHHHHHHHHHHHTTCCGGGEEEECCSGGGHHHHTSSSEEEEC-TTSCHHHHHHCSEECSCCTTHHHHHHHHHTT
T ss_pred             CCCHHHHHHHHHHHhCcCHHHEEEECCcHHhHHHHHHcCceEEe-cCchHHHHHhCCEEecCCCCcHHHHHHHHHh
Confidence            48889999999999999999999999999999999999997654 3332  25578999988654  888887654

>2b30_A Pvivax hypothetical protein; SGPP, structural genomics, PSI, protein structure initiative; 2.70A {Plasmodium vivax} SCOP: c.108.1.10

Probab=99.40  E-value=5e-14  Score=128.17  Aligned_cols=73  Identities=12%  Similarity=0.130  Sum_probs=60.6

Q ss_pred             CCCCHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHHcCCeEEEecCCC--CCCCCCEEeC-CHHH--HHHHhHHhhcc
Q 022360          205 CKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTVLIGKSQ--RVKGADYAFE-SIHN--IKEAIPELWES  278 (298)
Q Consensus       205 ~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a~~aG~~~v~v~~~~--~~~~ad~i~~-s~~~--l~~~l~~~~~~  278 (298)
                      +-+|+.+++.+++++|+++++|++|||+.||+.|++.+|+.++ ++++.  .+..|++++. +.++  +.++|++++..
T Consensus       222 ~~~K~~~l~~l~~~~~~~~~~~~~~GD~~nD~~m~~~ag~~va-~~na~~~~k~~a~~v~~~~~~~dGVa~~l~~~~~~  299 (301)
T 2b30_A          222 GHDKYTGINYLLKHYNISNDQVLVVGDAENDIAMLSNFKYSFA-VANATDSAKSHAKCVLPVSHREGAVAYLLKKVFDL  299 (301)
T ss_dssp             TCCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHSCSEEEE-CTTCCHHHHHHSSEECSSCTTTTHHHHHHHHHHTT
T ss_pred             CCCcHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHcCCeEE-EcCCcHHHHhhCCEEEccCCCCcHHHHHHHHHHhc
Confidence            4788899999999999999999999999999999999999765 43332  2567899998 7654  88888887643

>3zx4_A MPGP, mannosyl-3-phosphoglycerate phosphatase; hydrolase, haloalkanoid acid dehalogenase-like phosphatase, crystallographic snapshot; HET: 2M8; 1.74A {Thermus thermophilus} PDB: 3zty_A 3zu6_A* 3ztw_A* 3zw7_A* 3zwd_A* 3zwk_A 3zup_A* 3zx5_A*

Probab=99.38  E-value=1.7e-13  Score=121.38  Aligned_cols=73  Identities=10%  Similarity=-0.001  Sum_probs=61.3

Q ss_pred             CCCHHHHHHHHHHcCCCC--CcEEEEcCCccchHHHHHcCCeEEEecCCCCCCCCCEEeCCHHH--HHHHhHHhhccCc
Q 022360          206 KPSELAIEKALKIASINP--QRTLFFEDSVRNIQAGKRVGLDTVLIGKSQRVKGADYAFESIHN--IKEAIPELWESDM  280 (298)
Q Consensus       206 kp~~~~~~~~l~~l~i~p--~~~i~iGDs~~Di~~a~~aG~~~v~v~~~~~~~~ad~i~~s~~~--l~~~l~~~~~~~~  280 (298)
                      ++|+.+++++++++|+++  +++++|||+.||+.|++.+|+.+++.+... . .++++..+..+  +.++|++++....
T Consensus       175 ~~K~~~l~~l~~~~~i~~~~~~~~~~GD~~nD~~m~~~ag~~va~~na~~-~-~~~~~~~~~~~~gv~~~~~~~~~~~~  251 (259)
T 3zx4_A          175 ADKGRAVARLRALWPDPEEARFAVGLGDSLNDLPLFRAVDLAVYVGRGDP-P-EGVLATPAPGPEGFRYAVERYLLPRL  251 (259)
T ss_dssp             CCHHHHHHHHHHTCSSHHHHTSEEEEESSGGGHHHHHTSSEEEECSSSCC-C-TTCEECSSCHHHHHHHHHHHHTTTC-
T ss_pred             CCHHHHHHHHHHHhCCCCCCceEEEEeCCHHHHHHHHhCCCeEEeCChhh-c-CCcEEeCCCCchHHHHHHHHHHHhCc
Confidence            678899999999999999  999999999999999999999888775555 3 77888877554  8888888875443

>1nf2_A Phosphatase; structural proteomics, HAD NEW fold, structural genomics, BSGC structure funded by NIH structure initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.108.1.10

Probab=99.30  E-value=3e-13  Score=120.56  Aligned_cols=72  Identities=8%  Similarity=0.070  Sum_probs=59.4

Q ss_pred             CCCCHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHHcCCeEEEecCCC-CCCCCCEEeCCHHH--HHHHhHHhh
Q 022360          205 CKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTVLIGKSQ-RVKGADYAFESIHN--IKEAIPELW  276 (298)
Q Consensus       205 ~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a~~aG~~~v~v~~~~-~~~~ad~i~~s~~~--l~~~l~~~~  276 (298)
                      +.+|+.+++.+++++|+++++|++|||+.||++|++.+|+.+++.+... .+..|++++.+.++  +.++|++++
T Consensus       188 ~~~K~~~~~~~~~~~~~~~~~~~~~GD~~nD~~~~~~ag~~v~~~n~~~~~~~~a~~v~~~~~~dGv~~~i~~~~  262 (268)
T 1nf2_A          188 NVDKGKALRFLRERMNWKKEEIVVFGDNENDLFMFEEAGLRVAMENAIEKVKEASDIVTLTNNDSGVSYVLERIS  262 (268)
T ss_dssp             TCCHHHHHHHHHHHHTCCGGGEEEEECSHHHHHHHTTCSEEEECTTSCHHHHHHCSEECCCTTTTHHHHHHTTBC
T ss_pred             CCChHHHHHHHHHHcCCCHHHeEEEcCchhhHHHHHHcCCEEEecCCCHHHHhhCCEEEccCCcchHHHHHHHHH
Confidence            4788899999999999999999999999999999999999766543222 24569999988654  888887765

>2i33_A Acid phosphatase; HAD superfamily, hydrolase; 1.57A {Bacillus anthracis} PDB: 2i34_A

Probab=99.28  E-value=6.2e-12  Score=112.19  Aligned_cols=95  Identities=13%  Similarity=0.083  Sum_probs=68.5

Q ss_pred             CCCChhHHHHHHhC---CCcEEEEeCCC---hHHHHHHHHHhCCC--CccceeEeecCCCCCCCCCCCCChhhHHHHHhh
Q 022360           98 LKPDPVLRSLLLSL---PLRKIIFTNAD---KVHAVKVLSRLGLE--DCFEGIICFETLNPTHKNTVSDDEDDIAFVESA  169 (298)
Q Consensus        98 ~~~~~g~~~~L~~l---~~~~~ivS~~~---~~~~~~~l~~l~l~--~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~  169 (298)
                      ..++||+.++|+.|   +++++|+||..   ...+...++.+|+.  .+|+.+++.++.                     
T Consensus       100 ~~~~pg~~e~L~~L~~~Gi~i~iaTnr~~~~~~~~~~~L~~~Gl~~v~~~~vi~~~~~~---------------------  158 (258)
T 2i33_A          100 AEALPGSIDFLKYTESKGVDIYYISNRKTNQLDATIKNLERVGAPQATKEHILLQDPKE---------------------  158 (258)
T ss_dssp             CEECTTHHHHHHHHHHTTCEEEEEEEEEGGGHHHHHHHHHHHTCSSCSTTTEEEECTTC---------------------
T ss_pred             CCcCccHHHHHHHHHHCCCEEEEEcCCchhHHHHHHHHHHHcCCCcCCCceEEECCCCC---------------------
Confidence            56789999998876   48899999987   45667788888998  667766654421                     


Q ss_pred             hcccCCCCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccchHHHH-------H-
Q 022360          170 ASTTTSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGK-------R-  241 (298)
Q Consensus       170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a~-------~-  241 (298)
                                                         .||.+  ...++ ..+.  +.|++|||+.+|+.+|.       + 
T Consensus       159 -----------------------------------~K~~~--~~~~~-~~~~--~~~l~VGDs~~Di~aA~~~~~~~r~a  198 (258)
T 2i33_A          159 -----------------------------------KGKEK--RRELV-SQTH--DIVLFFGDNLSDFTGFDGKSVKDRNQ  198 (258)
T ss_dssp             -----------------------------------CSSHH--HHHHH-HHHE--EEEEEEESSGGGSTTCSSCCHHHHHH
T ss_pred             -----------------------------------CCcHH--HHHHH-HhCC--CceEEeCCCHHHhcccccCCHHHHHH
Confidence                                               24433  33333 2333  34999999999999993       4 


Q ss_pred             --------cCCeEEEecCCC
Q 022360          242 --------VGLDTVLIGKSQ  253 (298)
Q Consensus       242 --------aG~~~v~v~~~~  253 (298)
                              +|+.++.++++.
T Consensus       199 ~v~~~~~~aG~~~i~lpn~~  218 (258)
T 2i33_A          199 AVTDSKAQFGEKFIIFPNPM  218 (258)
T ss_dssp             HHHHTGGGBTTTEEECCCCS
T ss_pred             HHHHHHHHhcCceEECCCCC
Confidence                    799999887764

>1y8a_A Hypothetical protein AF1437; structural genomics, protein structu initiative, PSI, midwest center for structural genomics; 1.40A {Archaeoglobus fulgidus} SCOP: c.108.1.24

Probab=99.25  E-value=1.8e-12  Score=119.32  Aligned_cols=57  Identities=16%  Similarity=0.192  Sum_probs=46.4

Q ss_pred             CCCCCc----EEEEcCCccchHHHHHc----CCeEEEecCCC-CCCCCCEEeCC--HHHHHHHhHHhhc
Q 022360          220 SINPQR----TLFFEDSVRNIQAGKRV----GLDTVLIGKSQ-RVKGADYAFES--IHNIKEAIPELWE  277 (298)
Q Consensus       220 ~i~p~~----~i~iGDs~~Di~~a~~a----G~~~v~v~~~~-~~~~ad~i~~s--~~~l~~~l~~~~~  277 (298)
                      ++++++    |++|||+.||++|++.+    |+.+++ +... .+..|++++.+  .+.+.++|++++.
T Consensus       214 gi~~~~~~~~via~GDs~NDi~ml~~A~~~~g~~vam-na~~~lk~~Ad~v~~~~~~dGV~~~l~~~~~  281 (332)
T 1y8a_A          214 GYCESKGIDFPVVVGDSISDYKMFEAARGLGGVAIAF-NGNEYALKHADVVIISPTAMSEAKVIELFME  281 (332)
T ss_dssp             HHHHHHTCSSCEEEECSGGGHHHHHHHHHTTCEEEEE-SCCHHHHTTCSEEEECSSTHHHHHHHHHHHH
T ss_pred             ccChhhcCceEEEEeCcHhHHHHHHHHhhcCCeEEEe-cCCHHHHhhCcEEecCCCCCHHHHHHHHHHH
Confidence            777888    99999999999999999    999887 4332 36789999987  5568888877653

>3kc2_A Uncharacterized protein YKR070W; HAD-like, mitochondral protein, PSI, MCSG, structural genomi protein structure initiative; HET: MSE; 1.55A {Saccharomyces cerevisiae} PDB: 3rf6_A*

Probab=99.23  E-value=1e-10  Score=108.82  Aligned_cols=70  Identities=13%  Similarity=0.178  Sum_probs=58.7

Q ss_pred             CCCCHHHHHHHHHHc----------------------CC-----CCCcEEEEcCCc-cchHHHHHcCCeEEEecCCCC--
Q 022360          205 CKPSELAIEKALKIA----------------------SI-----NPQRTLFFEDSV-RNIQAGKRVGLDTVLIGKSQR--  254 (298)
Q Consensus       205 ~kp~~~~~~~~l~~l----------------------~i-----~p~~~i~iGDs~-~Di~~a~~aG~~~v~v~~~~~--  254 (298)
                      +||.+..|+.+++.+                      |+     ++++++||||+. +||.+|+++|+.++++.++..  
T Consensus       245 GKP~~~~y~~A~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~VGD~~~~Di~~A~~aG~~ti~V~~G~~~~  324 (352)
T 3kc2_A          245 GKPTKLTYDFAHHVLIDWEKRLSGKIGQSVKQKLPLLGTKPSTSPFHAVFMVGDNPASDIIGAQNYGWNSCLVKTGVYNE  324 (352)
T ss_dssp             STTCHHHHHHHHHHHHHHHHHHHC--------------CCTTTTTSSEEEEEESCTTTHHHHHHHHTCEEEECSSSSCCT
T ss_pred             cCCCHHHHHHHHHHHHHHHHhhhcccccccccccccccccccCCCcceEEEEecCcHHHHHHHHHcCCEEEEEccCCCCc
Confidence            899999999887654                      22     679999999999 699999999999999977642  


Q ss_pred             -----CCCCCEEeCCHHHHHHHhHH
Q 022360          255 -----VKGADYAFESIHNIKEAIPE  274 (298)
Q Consensus       255 -----~~~ad~i~~s~~~l~~~l~~  274 (298)
                           ...|+++++++.++.++|.+
T Consensus       325 ~~~~~~~~pd~vi~~l~el~~~il~  349 (352)
T 3kc2_A          325 GDDLKECKPTLIVNDVFDAVTKTLE  349 (352)
T ss_dssp             TCCCTTCCCSEECSSHHHHHHHHHH
T ss_pred             ccccccCCCCEEECCHHHHHHHHHH
Confidence                 35689999999998877644

>1ltq_A Polynucleotide kinase; phosphatase, alpha/beta, P-loop, transferase; HET: ADP; 2.33A {Enterobacteria phage T4} SCOP: c.108.1.9 c.37.1.1 PDB: 1rc8_A* 1rpz_A* 1rrc_A* 2ia5_A

Probab=99.11  E-value=1.1e-10  Score=105.48  Aligned_cols=98  Identities=10%  Similarity=0.101  Sum_probs=81.5

Q ss_pred             CCCChhHHHHHHhCC---CcEEEEeCCChHH---HHHHHHH--------hCCCCccceeEeecCCCCCCCCCCCCChhhH
Q 022360           98 LKPDPVLRSLLLSLP---LRKIIFTNADKVH---AVKVLSR--------LGLEDCFEGIICFETLNPTHKNTVSDDEDDI  163 (298)
Q Consensus        98 ~~~~~g~~~~L~~l~---~~~~ivS~~~~~~---~~~~l~~--------l~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~  163 (298)
                      ..++||+.++|+.|+   ++++++||.....   +...+++        +|+  +|+.+++.++..              
T Consensus       187 ~~~~~g~~e~L~~L~~~g~~~~v~T~k~~~~~~~~~~~l~~~~~~~~~~~~~--~~~~~~~~~~~~--------------  250 (301)
T 1ltq_A          187 DVINPMVVELSKMYALMGYQIVVVSGRESGTKEDPTKYYRMTRKWVEDIAGV--PLVMQCQREQGD--------------  250 (301)
T ss_dssp             CCBCHHHHHHHHHHHHTTCEEEEEECSCCCCSSSTTHHHHHHHHHHHHTTCC--CCSEEEECCTTC--------------
T ss_pred             cCCChHHHHHHHHHHHCCCeEEEEeCCCcccchhHHHHHHhcccccccccCC--CchheeeccCCC--------------
Confidence            456899999998874   7899999987543   3566777        788  488888766532              


Q ss_pred             HHHHhhhcccCCCCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCCCCc-EEEEcCCccchHHHHHc
Q 022360          164 AFVESAASTTTSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQR-TLFFEDSVRNIQAGKRV  242 (298)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~p~~-~i~iGDs~~Di~~a~~a  242 (298)
                                                               .||+|..+..++++++.++.+ |++|||+.+|+++|+++
T Consensus       251 -----------------------------------------~kp~p~~~~~~~~~~~~~~~~~~~~vgD~~~di~~a~~a  289 (301)
T 1ltq_A          251 -----------------------------------------TRKDDVVKEEIFWKHIAPHFDVKLAIDDRTQVVEMWRRI  289 (301)
T ss_dssp             -----------------------------------------CSCHHHHHHHHHHHHTTTTCEEEEEEECCHHHHHHHHHT
T ss_pred             -----------------------------------------CcHHHHHHHHHHHHHhccccceEEEeCCcHHHHHHHHHc
Confidence                                                     589999999999999887655 79999999999999999


Q ss_pred             CCeEEEecCC
Q 022360          243 GLDTVLIGKS  252 (298)
Q Consensus       243 G~~~v~v~~~  252 (298)
                      |+.++++.+|
T Consensus       290 G~~~~~v~~G  299 (301)
T 1ltq_A          290 GVECWQVASG  299 (301)
T ss_dssp             TCCEEECSCC
T ss_pred             CCeEEEecCC
Confidence            9999999887

>1xvi_A MPGP, YEDP, putative mannosyl-3-phosphoglycerate phosphatase; hypothetical protein, conserved protein, phophatase-like domain; HET: 1PE PG4 PGE; 2.26A {Escherichia coli K12} SCOP: c.108.1.10

Probab=99.06  E-value=2.8e-11  Score=108.38  Aligned_cols=72  Identities=11%  Similarity=0.118  Sum_probs=41.9

Q ss_pred             CCCCHHHHHHHHHHcC-CCCCc--EEEEcCCccchHHHHHcCCeEEEecCC---CC-CC--CCC-EEeCCHHH--HHHHh
Q 022360          205 CKPSELAIEKALKIAS-INPQR--TLFFEDSVRNIQAGKRVGLDTVLIGKS---QR-VK--GAD-YAFESIHN--IKEAI  272 (298)
Q Consensus       205 ~kp~~~~~~~~l~~l~-i~p~~--~i~iGDs~~Di~~a~~aG~~~v~v~~~---~~-~~--~ad-~i~~s~~~--l~~~l  272 (298)
                      +-+|+.+++.+++++| +++++  +++|||+.||+.|++.+|+.+++.+..   .. +.  .|+ +++.+.++  +.++|
T Consensus       187 ~~~K~~~l~~l~~~~~~~~~~~~~~~~~GD~~nD~~m~~~ag~~va~~n~~~~~~~~~~~~~a~~~v~~~~~~dGVa~~l  266 (275)
T 1xvi_A          187 SAGKDQAANWIIATYQQLSGKRPTTLGLGDGPNDAPLLEVMDYAVIVKGLNREGVHLHDEDPARVWRTQREGPEGWREGL  266 (275)
T ss_dssp             TCCHHHHHHHHHHHHHHHHSSCCEEEEEESSGGGHHHHHTSSEEEECCCCC-----------------------------
T ss_pred             CCCHHHHHHHHHHHhhhcccccCcEEEECCChhhHHHHHhCCceEEecCCCccchhhccccCCceeEccCCCchHHHHHH
Confidence            4788999999999999 99999  999999999999999999975544332   12 22  368 88877654  77778


Q ss_pred             HHhh
Q 022360          273 PELW  276 (298)
Q Consensus       273 ~~~~  276 (298)
                      ++++
T Consensus       267 ~~~l  270 (275)
T 1xvi_A          267 DHFF  270 (275)
T ss_dssp             ----
T ss_pred             HHHH
Confidence            7765

>2zos_A MPGP, mannosyl-3-phosphoglycerate phosphatase; haloacid dehalogenase like hydrolase, mannosylglycerate, cytoplasm, hydrolase, magnesium; 1.70A {Pyrococcus horikoshii} PDB: 1wzc_A

Probab=99.00  E-value=4.2e-11  Score=105.56  Aligned_cols=62  Identities=8%  Similarity=-0.143  Sum_probs=51.1

Q ss_pred             CCCHHHHHHHHHHcCC-CCCcEEEEcCCccchHHHHHcCCeEEEecCC-C-CCCCCCEEeCCHHH
Q 022360          206 KPSELAIEKALKIASI-NPQRTLFFEDSVRNIQAGKRVGLDTVLIGKS-Q-RVKGADYAFESIHN  267 (298)
Q Consensus       206 kp~~~~~~~~l~~l~i-~p~~~i~iGDs~~Di~~a~~aG~~~v~v~~~-~-~~~~ad~i~~s~~~  267 (298)
                      -+|+.+++.+++++++ +++++++|||+.||++|++.+|+++++.+.. . .+..|++++++..+
T Consensus       178 ~sKg~al~~l~~~~~~~~~~~viafGD~~NDi~Ml~~ag~~va~gna~~~~~~~~a~~v~~~~~~  242 (249)
T 2zos_A          178 SDKGKAAKILLDFYKRLGQIESYAVGDSYNDFPMFEVVDKVFIVGSLKHKKAQNVSSIIDVLEVI  242 (249)
T ss_dssp             CCHHHHHHHHHHHHHTTSCEEEEEEECSGGGHHHHTTSSEEEEESSCCCTTEEEESSHHHHHHHH
T ss_pred             CChHHHHHHHHHHhccCCCceEEEECCCcccHHHHHhCCcEEEeCCCCccccchhceEEeccccc
Confidence            6677999999999998 9999999999999999999999987765443 2 35567887776554

>3ocu_A Lipoprotein E; hydrolase, outer membrane; HET: NMN; 1.35A {Haemophilus influenzae} PDB: 3ocv_A* 3ocw_A* 3ocx_A* 3ocz_A* 3ocy_A* 3sf0_A* 2hlk_A 2hll_A 3et4_A 3et5_A

Probab=98.88  E-value=1.1e-09  Score=97.49  Aligned_cols=81  Identities=12%  Similarity=0.111  Sum_probs=59.3

Q ss_pred             CCCChhHHHHHHhC---CCcEEEEeCCCh----HHHHHHHHHhCCCCccc-eeEeecCCCCCCCCCCCCChhhHHHHHhh
Q 022360           98 LKPDPVLRSLLLSL---PLRKIIFTNADK----VHAVKVLSRLGLEDCFE-GIICFETLNPTHKNTVSDDEDDIAFVESA  169 (298)
Q Consensus        98 ~~~~~g~~~~L~~l---~~~~~ivS~~~~----~~~~~~l~~l~l~~~f~-~i~~~~~~~~~~~~~~~~~~~~~~~~~~~  169 (298)
                      .+++||+.++|+.|   +++++++|+.+.    ..+...++.+|+..+++ .++...+                      
T Consensus       100 ~~~~pG~~ell~~L~~~G~ki~ivTgR~~~~~r~~T~~~L~~lGi~~~~~~~Lilr~~----------------------  157 (262)
T 3ocu_A          100 SRAVPGAVEFNNYVNSHNGKVFYVTNRKDSTEKSGTIDDMKRLGFNGVEESAFYLKKD----------------------  157 (262)
T ss_dssp             CEECTTHHHHHHHHHHTTEEEEEEEEEETTTTHHHHHHHHHHHTCSCCSGGGEEEESS----------------------
T ss_pred             CCCCccHHHHHHHHHHCCCeEEEEeCCCccchHHHHHHHHHHcCcCcccccceeccCC----------------------
Confidence            57889999988876   488999998755    57788899999976663 4444321                      


Q ss_pred             hcccCCCCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccchHH
Q 022360          170 ASTTTSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQA  238 (298)
Q Consensus       170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~  238 (298)
                                                         ...|...+..+.+. |..  -+++|||+.+|+.+
T Consensus       158 -----------------------------------~~~K~~~r~~l~~~-Gy~--iv~~vGD~~~Dl~~  188 (262)
T 3ocu_A          158 -----------------------------------KSAKAARFAEIEKQ-GYE--IVLYVGDNLDDFGN  188 (262)
T ss_dssp             -----------------------------------CSCCHHHHHHHHHT-TEE--EEEEEESSGGGGCS
T ss_pred             -----------------------------------CCChHHHHHHHHhc-CCC--EEEEECCChHHhcc
Confidence                                               23445666666655 442  39999999999998

>3pct_A Class C acid phosphatase; hydrolase, outer membrane; 1.85A {Pasteurella multocida}

Probab=98.88  E-value=1.4e-09  Score=96.71  Aligned_cols=59  Identities=12%  Similarity=0.143  Sum_probs=42.2

Q ss_pred             hhhHHHHhhcccCCCCCCCChhHHHHHHhC---CCcEEEEeCCCh----HHHHHHHHHhCCCCccc-eeEe
Q 022360           82 YDDYHSFVHGRLPYENLKPDPVLRSLLLSL---PLRKIIFTNADK----VHAVKVLSRLGLEDCFE-GIIC  144 (298)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~g~~~~L~~l---~~~~~ivS~~~~----~~~~~~l~~l~l~~~f~-~i~~  144 (298)
                      ...+...+..    ...+++||+.++|+.|   +++++++|+.+.    ..+...|+.+|+..+++ .++.
T Consensus        88 ~~~w~~wv~~----g~~~~~pg~~ell~~L~~~G~~i~ivTgR~~~~~r~~T~~~L~~lGi~~~~~~~Lil  154 (260)
T 3pct_A           88 PKTWTKWVDA----RQSAAIPGAVEFSNYVNANGGTMFFVSNRRDDVEKAGTVDDMKRLGFTGVNDKTLLL  154 (260)
T ss_dssp             HHHHHHHHHT----TCCEECTTHHHHHHHHHHTTCEEEEEEEEETTTSHHHHHHHHHHHTCCCCSTTTEEE
T ss_pred             HHHHHHHHHc----CCCCCCccHHHHHHHHHHCCCeEEEEeCCCccccHHHHHHHHHHcCcCccccceeEe
Confidence            3444444443    2367889999988876   488999999755    47888899999987664 3443

>1u02_A Trehalose-6-phosphate phosphatase related protein; structural genomics, PSI; 1.92A {Thermoplasma acidophilum} SCOP: c.108.1.15

Probab=98.82  E-value=2.5e-09  Score=93.68  Aligned_cols=65  Identities=14%  Similarity=0.009  Sum_probs=56.2

Q ss_pred             CCCCHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHHc--CCeEEEecCCCCCCCCCEEeCC---HHHHHHHhHHhhc
Q 022360          205 CKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRV--GLDTVLIGKSQRVKGADYAFES---IHNIKEAIPELWE  277 (298)
Q Consensus       205 ~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a~~a--G~~~v~v~~~~~~~~ad~i~~s---~~~l~~~l~~~~~  277 (298)
                      +-.|..+++.+++++|     +++|||+.||+.|.+.+  |.++++.+.   +..|++++.+   -+.+.++|++++.
T Consensus       158 ~~~Kg~al~~l~~~~g-----via~GD~~ND~~Ml~~a~~g~~vam~Na---~~~A~~v~~~~~~~~gV~~~l~~~~~  227 (239)
T 1u02_A          158 GVNKGSAIRSVRGERP-----AIIAGDDATDEAAFEANDDALTIKVGEG---ETHAKFHVADYIEMRKILKFIEMLGV  227 (239)
T ss_dssp             TCCHHHHHHHHHTTSC-----EEEEESSHHHHHHHHTTTTSEEEEESSS---CCCCSEEESSHHHHHHHHHHHHHHHH
T ss_pred             CCCHHHHHHHHHhhCC-----eEEEeCCCccHHHHHHhhCCcEEEECCC---CCcceEEeCCCCCHHHHHHHHHHHHH
Confidence            4678899999999998     99999999999999999  988887654   5789999988   5568888888764

>4fe3_A Cytosolic 5'-nucleotidase 3; substrate complex, HAD-like, protein binding; HET: U5P; 1.74A {Mus musculus} PDB: 2g09_A* 2bdu_A* 2g08_A 2g06_A* 2g0a_A* 2q4t_A* 2g07_A* 2jga_A 2vkq_A 2cn1_A

Probab=98.62  E-value=2.5e-07  Score=83.32  Aligned_cols=43  Identities=12%  Similarity=0.121  Sum_probs=36.2

Q ss_pred             CCCCCChhHHHHHHhC---CCcEEEEeCCChHHHHHHHHHhCCCCc
Q 022360           96 ENLKPDPVLRSLLLSL---PLRKIIFTNADKVHAVKVLSRLGLEDC  138 (298)
Q Consensus        96 ~~~~~~~g~~~~L~~l---~~~~~ivS~~~~~~~~~~l~~l~l~~~  138 (298)
                      ...++.||+.++++.|   +++++++|++....++.+++.+|+...
T Consensus       138 ~~i~l~~g~~e~i~~l~~~gi~v~ivSgg~~~~i~~i~~~~g~~~~  183 (297)
T 4fe3_A          138 SDVMLKEGYENFFGKLQQHGIPVFIFSAGIGDVLEEVIRQAGVYHS  183 (297)
T ss_dssp             SCCCBCBTHHHHHHHHHHTTCCEEEEEEEEHHHHHHHHHHTTCCCT
T ss_pred             cCCCCCCcHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHHHcCCCcc
Confidence            3467888988888876   488999999999999999999998643

>2hhl_A CTD small phosphatase-like protein; CTD phosphatase, keggins anion, structural genomics, PSI, protein structure initiative; HET: KEG; 2.10A {Homo sapiens}

Probab=98.59  E-value=4.7e-09  Score=89.63  Aligned_cols=116  Identities=12%  Similarity=0.030  Sum_probs=90.6

Q ss_pred             CCCChhHHHHHHhCC--CcEEEEeCCChHHHHHHHHHhCCCCccceeEeecCCCCCCCCCCCCChhhHHHHHhhhcccCC
Q 022360           98 LKPDPVLRSLLLSLP--LRKIIFTNADKVHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSDDEDDIAFVESAASTTTS  175 (298)
Q Consensus        98 ~~~~~g~~~~L~~l~--~~~~ivS~~~~~~~~~~l~~l~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  175 (298)
                      ...+||+.++|+.++  +.++|+|++...+++.+++.+++..+|+.+++.++...                         
T Consensus        67 v~~RPgv~efL~~l~~~~~i~I~Tss~~~~a~~vl~~ld~~~~f~~~l~rd~~~~-------------------------  121 (195)
T 2hhl_A           67 VLKRPHVDEFLQRMGQLFECVLFTASLAKYADPVADLLDRWGVFRARLFRESCVF-------------------------  121 (195)
T ss_dssp             EEECTTHHHHHHHHHHHSEEEEECSSCHHHHHHHHHHHCCSSCEEEEECGGGCEE-------------------------
T ss_pred             EEeCcCHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHhCCcccEEEEEEccccee-------------------------
Confidence            466899999999986  88999999999999999999999999999998776542                         


Q ss_pred             CCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHHcCCeEEEecCCCCC
Q 022360          176 ANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTVLIGKSQRV  255 (298)
Q Consensus       176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a~~aG~~~v~v~~~~~~  255 (298)
                                                   .|   ..+.+.++++|.++++|++|||+.+++.++.++|+.+.....    
T Consensus       122 -----------------------------~k---~~~lK~L~~Lg~~~~~~vivDDs~~~~~~~~~ngi~i~~~~~----  165 (195)
T 2hhl_A          122 -----------------------------HR---GNYVKDLSRLGRELSKVIIVDNSPASYIFHPENAVPVQSWFD----  165 (195)
T ss_dssp             -----------------------------ET---TEEECCGGGSSSCGGGEEEEESCGGGGTTCGGGEEECCCCSS----
T ss_pred             -----------------------------cC---CceeeeHhHhCCChhHEEEEECCHHHhhhCccCccEEeeecC----
Confidence                                         12   346677789999999999999999999999999987643321    


Q ss_pred             CCCCEEeCCHHHHHHHhHHhhc
Q 022360          256 KGADYAFESIHNIKEAIPELWE  277 (298)
Q Consensus       256 ~~ad~i~~s~~~l~~~l~~~~~  277 (298)
                      ...|.   .+-+|...|+.+..
T Consensus       166 ~~~D~---eL~~L~~~L~~l~~  184 (195)
T 2hhl_A          166 DMTDT---ELLDLIPFFEGLSR  184 (195)
T ss_dssp             CTTCC---HHHHHHHHHHHHHC
T ss_pred             CCChH---HHHHHHHHHHHHHh
Confidence            11221   24456666666543

>2ght_A Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1; protein-peptide complex, HAD superfamily, hydrolase; HET: SEP; 1.80A {Homo sapiens} PDB: 2ghq_A* 3pgl_A* 1t9z_A* 1ta0_A* 3l0c_A 3l0y_A 3l0b_A* 2q5e_A

Probab=98.57  E-value=9.2e-09  Score=86.70  Aligned_cols=92  Identities=15%  Similarity=0.094  Sum_probs=79.3

Q ss_pred             CCCChhHHHHHHhCC--CcEEEEeCCChHHHHHHHHHhCCCCccceeEeecCCCCCCCCCCCCChhhHHHHHhhhcccCC
Q 022360           98 LKPDPVLRSLLLSLP--LRKIIFTNADKVHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSDDEDDIAFVESAASTTTS  175 (298)
Q Consensus        98 ~~~~~g~~~~L~~l~--~~~~ivS~~~~~~~~~~l~~l~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  175 (298)
                      ...+||+.++|+.+.  +.++|+|++...+++.+++.++...+|+.+++.++...                         
T Consensus        54 v~~rPg~~efL~~l~~~~~i~I~T~~~~~~a~~vl~~ld~~~~f~~~~~rd~~~~-------------------------  108 (181)
T 2ght_A           54 VLKRPHVDEFLQRMGELFECVLFTASLAKYADPVADLLDKWGAFRARLFRESCVF-------------------------  108 (181)
T ss_dssp             EEECTTHHHHHHHHHHHSEEEEECSSCHHHHHHHHHHHCTTCCEEEEECGGGSEE-------------------------
T ss_pred             EEeCCCHHHHHHHHHhCCCEEEEcCCCHHHHHHHHHHHCCCCcEEEEEeccCcee-------------------------
Confidence            567899999999986  78999999999999999999999999999988765432                         


Q ss_pred             CCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHHcCCeE
Q 022360          176 ANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDT  246 (298)
Q Consensus       176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a~~aG~~~  246 (298)
                                                   .|   ..+.+.++++|.++++|++|||+.+++.++.++|+.+
T Consensus       109 -----------------------------~k---~~~~k~L~~Lg~~~~~~vivdDs~~~~~~~~~ngi~i  147 (181)
T 2ght_A          109 -----------------------------HR---GNYVKDLSRLGRDLRRVLILDNSPASYVFHPDNAVPV  147 (181)
T ss_dssp             -----------------------------ET---TEEECCGGGTCSCGGGEEEECSCGGGGTTCTTSBCCC
T ss_pred             -----------------------------cC---CcEeccHHHhCCCcceEEEEeCCHHHhccCcCCEeEe
Confidence                                         11   2356677889999999999999999999999999884

>3f9r_A Phosphomannomutase; trypanosome glycobiology structural genomics, isomerase, structural genomics consortium, SGC; 1.85A {Trypanosoma brucei} SCOP: c.108.1.0 PDB: 2i54_A* 2i55_A*

Probab=98.46  E-value=1.6e-07  Score=82.61  Aligned_cols=55  Identities=7%  Similarity=0.000  Sum_probs=42.6

Q ss_pred             CCCCHHHHHHHHHHcCCCCCcEEEEcCC----ccchHHHHHcCCeEEEecCCCCCCCCCEEeCCHHHHHHHhHHhh
Q 022360          205 CKPSELAIEKALKIASINPQRTLFFEDS----VRNIQAGKRVGLDTVLIGKSQRVKGADYAFESIHNIKEAIPELW  276 (298)
Q Consensus       205 ~kp~~~~~~~~l~~l~i~p~~~i~iGDs----~~Di~~a~~aG~~~v~v~~~~~~~~ad~i~~s~~~l~~~l~~~~  276 (298)
                      +-.|..+++++++    +++++++|||+    .||++|.+.+|.-.+             .+.+..+..+.+..++
T Consensus       185 gv~Kg~al~~L~~----~~~ev~afGD~~~~g~NDi~Ml~~a~~~g~-------------~v~n~~~~~~~~~~~~  243 (246)
T 3f9r_A          185 GWDKTYCLQFVED----DFEEIHFFGDKTQEGGNDYEIYTDKRTIGH-------------KVTSYKDTIAEVEKII  243 (246)
T ss_dssp             TCSGGGGGGGTTT----TCSEEEEEESCCSTTSTTHHHHTCTTSEEE-------------ECSSHHHHHHHHHHHH
T ss_pred             CCCHHHHHHHHHc----CcccEEEEeCCCCCCCCCHHHHhCCCccEE-------------EeCCHHHHHHHHHHHh
Confidence            3666788998888    88999999996    999999998875555             3455666666666665

>3j08_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus}

Probab=98.41  E-value=5.3e-07  Score=90.11  Aligned_cols=109  Identities=13%  Similarity=0.167  Sum_probs=83.6

Q ss_pred             CCChhHHHHHHhC---CCcEEEEeCCChHHHHHHHHHhCCCCccceeEeecCCCCCCCCCCCCChhhHHHHHhhhcccCC
Q 022360           99 KPDPVLRSLLLSL---PLRKIIFTNADKVHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSDDEDDIAFVESAASTTTS  175 (298)
Q Consensus        99 ~~~~g~~~~L~~l---~~~~~ivS~~~~~~~~~~l~~l~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  175 (298)
                      ++.|++.+.++.|   +++++++|+.....++.+.+.+|++.+|..+.                                
T Consensus       457 ~l~~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~lgi~~~~~~~~--------------------------------  504 (645)
T 3j08_A          457 TLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLDLVIAEVL--------------------------------  504 (645)
T ss_dssp             CCTTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCSEEECSCC--------------------------------
T ss_pred             CchhHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCCEEEEeCC--------------------------------
Confidence            4567777777665   58899999999999999999999875442221                                


Q ss_pred             CCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHHcCCeEEEecC-CCC
Q 022360          176 ANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTVLIGK-SQR  254 (298)
Q Consensus       176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a~~aG~~~v~v~~-~~~  254 (298)
                                                   +..|...++.+.++     ++++||||+.||+.|.+.+|++.++.+. ...
T Consensus       505 -----------------------------P~~K~~~v~~l~~~-----~~v~~vGDg~ND~~al~~A~vgiamg~g~~~a  550 (645)
T 3j08_A          505 -----------------------------PHQKSEEVKKLQAK-----EVVAFVGDGINDAPALAQADLGIAVGSGSDVA  550 (645)
T ss_dssp             -----------------------------TTCHHHHHHHHTTT-----CCEEEEECSSSCHHHHHHSSEEEEECCCSCCS
T ss_pred             -----------------------------HHhHHHHHHHHhhC-----CeEEEEeCCHhHHHHHHhCCEEEEeCCCcHHH
Confidence                                         35555666665443     7899999999999999999998887633 345


Q ss_pred             CCCCCEEe--CCHHHHHHHhH
Q 022360          255 VKGADYAF--ESIHNIKEAIP  273 (298)
Q Consensus       255 ~~~ad~i~--~s~~~l~~~l~  273 (298)
                      +..+|+++  ++++.+.+.++
T Consensus       551 ~~~AD~vl~~~~~~~i~~~i~  571 (645)
T 3j08_A          551 VESGDIVLIRDDLRDVVAAIQ  571 (645)
T ss_dssp             SCCSSSEESSCCTTHHHHHHH
T ss_pred             HHhCCEEEecCCHHHHHHHHH
Confidence            88899999  66777766554

>4gxt_A A conserved functionally unknown protein; structural genomics, PSI-biology; 1.82A {Anaerococcus prevotii}

Probab=98.31  E-value=4.2e-07  Score=85.37  Aligned_cols=103  Identities=14%  Similarity=0.023  Sum_probs=65.6

Q ss_pred             CCChhHHHHHHhC---CCcEEEEeCCChHHHHHHHHHhCCCCcc--ceeEeec----CCCCCCCCCCCCChhhHHHHHhh
Q 022360           99 KPDPVLRSLLLSL---PLRKIIFTNADKVHAVKVLSRLGLEDCF--EGIICFE----TLNPTHKNTVSDDEDDIAFVESA  169 (298)
Q Consensus        99 ~~~~g~~~~L~~l---~~~~~ivS~~~~~~~~~~l~~l~l~~~f--~~i~~~~----~~~~~~~~~~~~~~~~~~~~~~~  169 (298)
                      .++|++.++++.|   +++++|+|++....++.+.+.+|+.--+  +.|++..    +.+.+                  
T Consensus       221 r~~p~~~eLi~~L~~~G~~v~IVSgg~~~~v~~ia~~lg~~y~ip~~~Vig~~l~~~~dG~~------------------  282 (385)
T 4gxt_A          221 RTLDEMVDLYRSLEENGIDCYIVSASFIDIVRAFATDTNNNYKMKEEKVLGLRLMKDDEGKI------------------  282 (385)
T ss_dssp             EECHHHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHCTTSSCCCCGGGEEEECEEECTTCCE------------------
T ss_pred             eeCHHHHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHhCcccCCCcceEEEeEEEEecCCce------------------
Confidence            4689999998887   4889999999999999999998763212  3344331    11110                  


Q ss_pred             hcccCCCCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHHcC
Q 022360          170 ASTTTSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVG  243 (298)
Q Consensus       170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a~~aG  243 (298)
                                     .+.+....+   ..     .+..|+..++.+++. .+....++++|||.+|+.|.+..+
T Consensus       283 ---------------tg~~~~~~p---~~-----~~~gK~~~i~~~~~~-~~~~~~i~a~GDs~~D~~ML~~~~  332 (385)
T 4gxt_A          283 ---------------LPKFDKDFP---IS-----IREGKVQTINKLIKN-DRNYGPIMVGGDSDGDFAMLKEFD  332 (385)
T ss_dssp             ---------------EEEECTTSC---CC-----STHHHHHHHHHHTCC-TTEECCSEEEECSGGGHHHHHHCT
T ss_pred             ---------------eeeecCccc---ee-----CCCchHHHHHHHHHh-cCCCCcEEEEECCHhHHHHHhcCc
Confidence                           110100000   00     034466777766543 244456999999999999999854

>2jc9_A Cytosolic purine 5'-nucleotidase; cytosolic 5-prime nucleotidase II, GMP-IMP specific nucleotidase, CN-II, NT5C2, hydrolase, polymorphism; HET: ADN; 1.5A {Homo sapiens} PDB: 2j2c_A* 2xje_A* 2xjf_A* 2jcm_A* 2xcw_A* 2xcv_A* 2xcx_A 2xjb_A* 2xjc_A* 2xjd_A*

Probab=98.26  E-value=2.3e-06  Score=82.97  Aligned_cols=124  Identities=16%  Similarity=0.142  Sum_probs=79.2

Q ss_pred             CCCChhHHHHHHhCC--CcEEEEeCCChHHHHHHHHHh-C-------------CCCccceeEeecCCCCCCCCCCCCChh
Q 022360           98 LKPDPVLRSLLLSLP--LRKIIFTNADKVHAVKVLSRL-G-------------LEDCFEGIICFETLNPTHKNTVSDDED  161 (298)
Q Consensus        98 ~~~~~g~~~~L~~l~--~~~~ivS~~~~~~~~~~l~~l-~-------------l~~~f~~i~~~~~~~~~~~~~~~~~~~  161 (298)
                      +...|.+..+|++++  .++.|+||+...++...++.+ |             +.++||.+++...-..+          
T Consensus       245 v~kdp~l~~~L~~Lr~~GKlfLiTNS~~~yv~~~m~yllg~~~~~~~~~~~~dWrdlFD~vI~~A~KP~F----------  314 (555)
T 2jc9_A          245 VVKDGKLPLLLSRMKEVGKVFLATNSDYKYTDKIMTYLFDFPHGPKPGSSHRPWQSYFDLILVDARKPLF----------  314 (555)
T ss_dssp             BCCCTHHHHHHHHHHHHSEEEEECSSCHHHHHHHHHHHTCSSSSSSTTSCCCCGGGGCSEEEESCCTTGG----------
T ss_pred             cCCChHHHHHHHHHHHcCCEEEEeCCChHHHHHHHHHhcCCCccccccccccchhhhCCEEEEeCCCCCc----------
Confidence            455788888888763  289999999999999999888 6             45689987765322110          


Q ss_pred             hHHHHHhhhcccCCCCCCchhhhcccc--CCCCCCcccCCCCCCCCCCCHHH-----HHHHHHHcCCCCCcEEEEcCCc-
Q 022360          162 DIAFVESAASTTTSANGPQIFDIIGHF--AQPNPSLVALPKTPIACKPSELA-----IEKALKIASINPQRTLFFEDSV-  233 (298)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~kp~~~~-----~~~~l~~l~i~p~~~i~iGDs~-  233 (298)
                                ..   +.-.+.++...-  +...     .+.+   .-.++..     +..+++.+|+.+++++||||+. 
T Consensus       315 ----------F~---~~~pfr~Vd~~tg~l~~~-----~~~~---~l~~g~vY~gGn~~~~~~llg~~g~eVLYVGDhIf  373 (555)
T 2jc9_A          315 ----------FG---EGTVLRQVDTKTGKLKIG-----TYTG---PLQHGIVYSGGSSDTICDLLGAKGKDILYIGDHIF  373 (555)
T ss_dssp             ----------GT---TCCCEEEEETTTTEECSS-----CCCS---CCCTTCCEEECCHHHHHHHHTCCGGGEEEEESCCC
T ss_pred             ----------cc---CCCcceEeecCCCccccc-----cccc---cccCCceeccCCHHHHHHHhCCCCCeEEEECCEeh
Confidence                      00   000011110000  0000     0000   0001112     4888889999999999999999 


Q ss_pred             cchHHHH-HcCCeEEEecCC
Q 022360          234 RNIQAGK-RVGLDTVLIGKS  252 (298)
Q Consensus       234 ~Di~~a~-~aG~~~v~v~~~  252 (298)
                      +||..++ ..||.+++|-..
T Consensus       374 tDIl~~kk~~GWrTiLViPE  393 (555)
T 2jc9_A          374 GDILKSKKRQGWRTFLVIPE  393 (555)
T ss_dssp             CCCHHHHHHHCCEEEEECTT
T ss_pred             HhHHhHHhhcCeEEEEEEec
Confidence            9999997 899999998654

>3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus}

Probab=98.26  E-value=1.7e-06  Score=87.45  Aligned_cols=109  Identities=13%  Similarity=0.167  Sum_probs=82.5

Q ss_pred             CCChhHHHHHHhC---CCcEEEEeCCChHHHHHHHHHhCCCCccceeEeecCCCCCCCCCCCCChhhHHHHHhhhcccCC
Q 022360           99 KPDPVLRSLLLSL---PLRKIIFTNADKVHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSDDEDDIAFVESAASTTTS  175 (298)
Q Consensus        99 ~~~~g~~~~L~~l---~~~~~ivS~~~~~~~~~~l~~l~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  175 (298)
                      ++.|++.+.++.|   +++++++|+.....++.+.+.+|++.++..+.                                
T Consensus       535 ~~~~~~~~~i~~l~~~Gi~v~~~TGd~~~~a~~ia~~lgi~~~~~~~~--------------------------------  582 (723)
T 3j09_A          535 TLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLDLVIAEVL--------------------------------  582 (723)
T ss_dssp             CSCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCSEEECSCC--------------------------------
T ss_pred             CcchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCcEEEccCC--------------------------------
Confidence            4567777776665   58899999999999999999999875432221                                


Q ss_pred             CCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHHcCCeEEEecC-CCC
Q 022360          176 ANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTVLIGK-SQR  254 (298)
Q Consensus       176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a~~aG~~~v~v~~-~~~  254 (298)
                                                   +..|...++.+.++     ++++||||+.||+.|.+.+|++.++.+. ...
T Consensus       583 -----------------------------P~~K~~~v~~l~~~-----~~v~~vGDg~ND~~al~~A~vgiamg~g~~~a  628 (723)
T 3j09_A          583 -----------------------------PHQKSEEVKKLQAK-----EVVAFVGDGINDAPALAQADLGIAVGSGSDVA  628 (723)
T ss_dssp             -----------------------------TTCHHHHHHHHTTT-----CCEEEEECSSTTHHHHHHSSEEEECCCCSCCS
T ss_pred             -----------------------------HHHHHHHHHHHhcC-----CeEEEEECChhhHHHHhhCCEEEEeCCCcHHH
Confidence                                         34555666655443     7899999999999999999988887633 345


Q ss_pred             CCCCCEEe--CCHHHHHHHhH
Q 022360          255 VKGADYAF--ESIHNIKEAIP  273 (298)
Q Consensus       255 ~~~ad~i~--~s~~~l~~~l~  273 (298)
                      +..+|+++  ++++.+.+.++
T Consensus       629 ~~~AD~vl~~~~~~~i~~~i~  649 (723)
T 3j09_A          629 VESGDIVLIRDDLRDVVAAIQ  649 (723)
T ss_dssp             SCCSSEECSSCCTTHHHHHHH
T ss_pred             HHhCCEEEeCCCHHHHHHHHH
Confidence            88999999  66777766554

>1s2o_A SPP, sucrose-phosphatase; phosphohydrolase, HAD superfamily, cyanobacteria; 1.40A {Synechocystis SP} SCOP: c.108.1.10 PDB: 1tj3_A 1tj4_A* 1tj5_A* 1u2s_A* 1u2t_A* 2b1q_A* 2b1r_A* 2d2v_A*

Probab=98.17  E-value=7.3e-07  Score=77.98  Aligned_cols=71  Identities=20%  Similarity=0.202  Sum_probs=57.1

Q ss_pred             CCCCHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHHcCCeEEEecCCCC-CC-------CCCEEeCCHHH--HHHHhHH
Q 022360          205 CKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTVLIGKSQR-VK-------GADYAFESIHN--IKEAIPE  274 (298)
Q Consensus       205 ~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a~~aG~~~v~v~~~~~-~~-------~ad~i~~s~~~--l~~~l~~  274 (298)
                      +-+|+.+++.+++++|++++++++|||+.||+.|++.+|+.+++.+.... +.       .+++++.+.++  +.++|++
T Consensus       160 ~~~K~~~l~~l~~~~~~~~~~~~~~GD~~nD~~m~~~~g~~va~~na~~~~k~~a~~~~~~a~~v~~~~~~dGva~~i~~  239 (244)
T 1s2o_A          160 RSNKGNATQYLQQHLAMEPSQTLVCGDSGNDIGLFETSARGVIVRNAQPELLHWYDQWGDSRHYRAQSSHAGAILEAIAH  239 (244)
T ss_dssp             TCSHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHTSSSEEEECTTCCHHHHHHHHHHCCTTEEECSSCHHHHHHHHHHH
T ss_pred             CCChHHHHHHHHHHhCCCHHHEEEECCchhhHHHHhccCcEEEEcCCcHHHHHHHhcccccceeecCCcchhHHHHHHHH
Confidence            47889999999999999999999999999999999999987655332222 33       37899988665  7777776


Q ss_pred             h
Q 022360          275 L  275 (298)
Q Consensus       275 ~  275 (298)
                      +
T Consensus       240 ~  240 (244)
T 1s2o_A          240 F  240 (244)
T ss_dssp             T
T ss_pred             h
Confidence            5

>4g63_A Cytosolic IMP-GMP specific 5'-nucleotidase; structural genomics, PSI-biology, northeast structural genom consortium, NESG; 2.70A {Legionella pneumophila subsp} PDB: 2bde_A

Probab=98.06  E-value=1.4e-05  Score=76.46  Aligned_cols=123  Identities=15%  Similarity=0.118  Sum_probs=76.4

Q ss_pred             CCChhHHHHHHhCC---CcEEEEeCCChHHHHHHHHHh---------CCCCccceeEeecCCCCCCCCCCCCChhhHHHH
Q 022360           99 KPDPVLRSLLLSLP---LRKIIFTNADKVHAVKVLSRL---------GLEDCFEGIICFETLNPTHKNTVSDDEDDIAFV  166 (298)
Q Consensus        99 ~~~~g~~~~L~~l~---~~~~ivS~~~~~~~~~~l~~l---------~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~  166 (298)
                      ...|.+..+|++++   .++.++||+.-.++...++.+         .+.++||.|++...-..              |.
T Consensus       186 ~k~~~l~~~L~~lr~~GKklFLiTNS~~~y~~~~M~y~~~~~~~~g~dWrdlFDvVIv~A~KP~--------------FF  251 (470)
T 4g63_A          186 IREKEVVEGLKHFIRYGKKIFILTNSEYSYSKLLLDYALSPFLDKGEHWQGLFEFVITLANKPR--------------FF  251 (470)
T ss_dssp             ECCHHHHHHHHHHHTTTCEEEEECSSCHHHHHHHHHHHTGGGSCTTCCGGGGCSEEEESCCTTH--------------HH
T ss_pred             hCCHhHHHHHHHHHHcCCeEEEeeCCCchHHHHHHHhhcccCCCCCCChhhhcCEEEECCCCCC--------------cc
Confidence            34688888888764   679999999999999888775         36779999998643211              00


Q ss_pred             Hh----hhcccCCCCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCc-cchHHHHH
Q 022360          167 ES----AASTTTSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSV-RNIQAGKR  241 (298)
Q Consensus       167 ~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~p~~~i~iGDs~-~Di~~a~~  241 (298)
                      ..    +.+.+   +...+..+.    ++.+|=|+       .-.   ....+.+.+|+...+++||||+. .||...+.
T Consensus       252 ~~~~~~~~v~~---~~g~l~~~~----~~~~~~vY-------~gG---n~~~l~~llg~~g~~VLY~GDhi~~Di~~~kk  314 (470)
T 4g63_A          252 YDNLRFLSVNP---ENGTMTNVH----GPIVPGVY-------QGG---NAKKFTEDLGVGGDEILYIGDHIYGDILRLKK  314 (470)
T ss_dssp             HSCCCEEEECT---TTCCEEECC----SSCCSEEE-------EEC---CHHHHHHHTTCCGGGEEEEESCCCSCHHHHHH
T ss_pred             cCCCcceEEEC---CCCcccccc----cccCCcee-------ecC---cHHHHHHHhCCCCCeEEEECCchHHHHHhhhh
Confidence            00    00000   000000000    01111011       122   24556677899999999999999 99877765


Q ss_pred             -cCCeEEEecCC
Q 022360          242 -VGLDTVLIGKS  252 (298)
Q Consensus       242 -aG~~~v~v~~~  252 (298)
                       .||.+++|-..
T Consensus       315 ~~gWrT~~Ii~E  326 (470)
T 4g63_A          315 DCNWRTALVVEE  326 (470)
T ss_dssp             SCCCEEEEECTT
T ss_pred             ccCCeEEEEhHH
Confidence             69999988554

>3rfu_A Copper efflux ATPase; alpha helical, CPC, CXXC, ATP-binding, hydrolase, ION transp magnesium, Cu+, membrane, metal-binding; 3.20A {Legionella pneumophila subsp}

Probab=97.97  E-value=8.2e-06  Score=82.60  Aligned_cols=109  Identities=14%  Similarity=0.159  Sum_probs=78.2

Q ss_pred             CCChhHHHHHHhC---CCcEEEEeCCChHHHHHHHHHhCCCCccceeEeecCCCCCCCCCCCCChhhHHHHHhhhcccCC
Q 022360           99 KPDPVLRSLLLSL---PLRKIIFTNADKVHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSDDEDDIAFVESAASTTTS  175 (298)
Q Consensus        99 ~~~~g~~~~L~~l---~~~~~ivS~~~~~~~~~~l~~l~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  175 (298)
                      ++.|++.+.++.|   +++++++|+.....++.+.+.+|++.++..+.                                
T Consensus       554 ~i~~~~~~aI~~L~~~Gi~v~mlTGd~~~~a~~ia~~lgi~~v~a~~~--------------------------------  601 (736)
T 3rfu_A          554 PIKSSTPETILELQQSGIEIVMLTGDSKRTAEAVAGTLGIKKVVAEIM--------------------------------  601 (736)
T ss_dssp             CBCSSHHHHHHHHHHHTCEEEEECSSCHHHHHHHHHHHTCCCEECSCC--------------------------------
T ss_pred             cchhhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCEEEEecC--------------------------------
Confidence            3457777777666   58899999999999999999999875432221                                


Q ss_pred             CCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHHcCCeEEEecCC-CC
Q 022360          176 ANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTVLIGKS-QR  254 (298)
Q Consensus       176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a~~aG~~~v~v~~~-~~  254 (298)
                                                   +..|.+.++.+.+    ....++||||+.||+.|.+.++++.++.+.. ..
T Consensus       602 -----------------------------P~~K~~~v~~l~~----~g~~V~~vGDG~ND~paL~~AdvGIAmg~g~d~a  648 (736)
T 3rfu_A          602 -----------------------------PEDKSRIVSELKD----KGLIVAMAGDGVNDAPALAKADIGIAMGTGTDVA  648 (736)
T ss_dssp             -----------------------------HHHHHHHHHHHHH----HSCCEEEEECSSTTHHHHHHSSEEEEESSSCSHH
T ss_pred             -----------------------------HHHHHHHHHHHHh----cCCEEEEEECChHhHHHHHhCCEEEEeCCccHHH
Confidence                                         1223344444433    4677999999999999999999998887433 34


Q ss_pred             CCCCCEEeC--CHHHHHHHh
Q 022360          255 VKGADYAFE--SIHNIKEAI  272 (298)
Q Consensus       255 ~~~ad~i~~--s~~~l~~~l  272 (298)
                      +..+|+++.  +++.+.+.|
T Consensus       649 ~~~AD~vl~~~~~~~i~~ai  668 (736)
T 3rfu_A          649 IESAGVTLLHGDLRGIAKAR  668 (736)
T ss_dssp             HHHCSEEECSCCSTTHHHHH
T ss_pred             HHhCCEEEccCCHHHHHHHH
Confidence            788999984  455555443

>3qle_A TIM50P; chaperone, mitochondrion, preprotein translocation; HET: 1PE; 1.83A {Saccharomyces cerevisiae EC1118}

Probab=97.85  E-value=4.6e-07  Score=77.73  Aligned_cols=93  Identities=10%  Similarity=0.016  Sum_probs=71.9

Q ss_pred             CCCChhHHHHHHhCC--CcEEEEeCCChHHHHHHHHHhCCC-CccceeEeecCCCCCCCCCCCCChhhHHHHHhhhcccC
Q 022360           98 LKPDPVLRSLLLSLP--LRKIIFTNADKVHAVKVLSRLGLE-DCFEGIICFETLNPTHKNTVSDDEDDIAFVESAASTTT  174 (298)
Q Consensus        98 ~~~~~g~~~~L~~l~--~~~~ivS~~~~~~~~~~l~~l~l~-~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  174 (298)
                      +...||+.++|+.+.  +.++|.|.+...++..+++.++.. .+|+..+..+.....                       
T Consensus        58 v~~RPgl~eFL~~l~~~yeivI~Tas~~~ya~~vl~~LDp~~~~f~~rl~R~~c~~~-----------------------  114 (204)
T 3qle_A           58 TAKRPGADYFLGYLSQYYEIVLFSSNYMMYSDKIAEKLDPIHAFVSYNLFKEHCVYK-----------------------  114 (204)
T ss_dssp             EEECTTHHHHHHHHTTTEEEEEECSSCHHHHHHHHHHTSTTCSSEEEEECGGGSEEE-----------------------
T ss_pred             EEeCCCHHHHHHHHHhCCEEEEEcCCcHHHHHHHHHHhCCCCCeEEEEEEecceeEE-----------------------
Confidence            466799999999986  679999999999999999999986 488887766543210                       


Q ss_pred             CCCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHHcCCeEE
Q 022360          175 SANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTV  247 (298)
Q Consensus       175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a~~aG~~~v  247 (298)
                                                     .   ..+.+-++.+|.++++||+|.|+.+-+.+....|+...
T Consensus       115 -------------------------------~---g~y~KdL~~Lgrdl~~vIiIDDsp~~~~~~p~N~I~I~  153 (204)
T 3qle_A          115 -------------------------------D---GVHIKDLSKLNRDLSKVIIIDTDPNSYKLQPENAIPME  153 (204)
T ss_dssp             -------------------------------T---TEEECCGGGSCSCGGGEEEEESCTTTTTTCGGGEEECC
T ss_pred             -------------------------------C---CeeeecHHHhCCChHHEEEEECCHHHHhhCccCceEee
Confidence                                           0   11445567789999999999999988876666665543

>3ar4_A Sarcoplasmic/endoplasmic reticulum calcium ATPase; P-type ATPase, hydrolase, calcium transport, calcium binding binding; HET: ATP TG1 PTY; 2.15A {Oryctolagus cuniculus} PDB: 2ear_A* 2eas_A* 2eat_A* 2eau_A* 2dqs_A* 2zbe_A 2zbf_A* 2zbg_A* 3ar2_A* 2zbd_A* 3ar3_A* 3ar5_A* 3ar6_A* 3ar7_A* 3ar8_A* 3ar9_A* 3n5k_A* 1kju_A 1iwo_A 1t5s_A* ...

Probab=97.82  E-value=1.4e-05  Score=83.66  Aligned_cols=135  Identities=14%  Similarity=0.129  Sum_probs=83.8

Q ss_pred             CCChhHHHHHHhC---CCcEEEEeCCChHHHHHHHHHhCCCCcc----ceeEeecCCCCCCCCCCCCChhhHHHHHhhhc
Q 022360           99 KPDPVLRSLLLSL---PLRKIIFTNADKVHAVKVLSRLGLEDCF----EGIICFETLNPTHKNTVSDDEDDIAFVESAAS  171 (298)
Q Consensus        99 ~~~~g~~~~L~~l---~~~~~ivS~~~~~~~~~~l~~l~l~~~f----~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  171 (298)
                      ++.|++.+.++.|   +++++++|+.....+..+.+.+|+....    +.+++++++...      ++++..+.+....+
T Consensus       603 ~lr~~~~~~I~~l~~~Gi~v~miTGD~~~ta~~ia~~lgi~~~~~~i~~~~~~g~~~~~l------~~~~~~~~~~~~~v  676 (995)
T 3ar4_A          603 PPRKEVMGSIQLCRDAGIRVIMITGDNKGTAIAICRRIGIFGENEEVADRAYTGREFDDL------PLAEQREACRRACC  676 (995)
T ss_dssp             CBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHTSSCTTCCCTTTEEEHHHHHTS------CHHHHHHHHHHCCE
T ss_pred             CCchhHHHHHHHHHHcCCEEEEECCCCHHHHHHHHHHcCcCCCCCcccceEEEchhhhhC------CHHHHHHHHhhCcE
Confidence            3467777777665   5899999999999999999999996532    223333322110      01111111110000


Q ss_pred             ccCCCCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHHcCCeEEEecC
Q 022360          172 TTTSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTVLIGK  251 (298)
Q Consensus       172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a~~aG~~~v~v~~  251 (298)
                                      |...      .      ++.|..+++.+.+    ..+.++|+||+.||+.|.+.|+++.++. .
T Consensus       677 ----------------~~r~------~------P~~K~~~v~~l~~----~g~~v~~~GDG~ND~~alk~Advgiamg-~  723 (995)
T 3ar4_A          677 ----------------FARV------E------PSHKSKIVEYLQS----YDEITAMTGDGVNDAPALKKAEIGIAMG-S  723 (995)
T ss_dssp             ----------------EESC------C------SSHHHHHHHHHHT----TTCCEEEEECSGGGHHHHHHSTEEEEET-T
T ss_pred             ----------------EEEe------C------HHHHHHHHHHHHH----CCCEEEEEcCCchhHHHHHHCCeEEEeC-C
Confidence                            0000      0      2333444554443    3578999999999999999999998875 3


Q ss_pred             CC--CCCCCCEEeC--CHHHHHHHh
Q 022360          252 SQ--RVKGADYAFE--SIHNIKEAI  272 (298)
Q Consensus       252 ~~--~~~~ad~i~~--s~~~l~~~l  272 (298)
                      +.  .+..+|+++.  ++..+.+.|
T Consensus       724 g~~~ak~aAd~vl~~~~~~~i~~~i  748 (995)
T 3ar4_A          724 GTAVAKTASEMVLADDNFSTIVAAV  748 (995)
T ss_dssp             SCHHHHHTCSEEETTCCHHHHHHHH
T ss_pred             CCHHHHHhCCEEECCCCHHHHHHHH
Confidence            32  4778999994  577776655

>3ef0_A RNA polymerase II subunit A C-terminal domain phosphatase; CTD, FCPH, BRCT, hydrolase, ALF4, transition state analog, cobalt, magnesium; 2.10A {Schizosaccharomyces pombe}

Probab=97.68  E-value=1.3e-06  Score=81.44  Aligned_cols=51  Identities=20%  Similarity=0.245  Sum_probs=42.3

Q ss_pred             CCCCChhHHHHHHhCC--CcEEEEeCCChHHHHHHHHHhCCCC-ccc-eeEeecC
Q 022360           97 NLKPDPVLRSLLLSLP--LRKIIFTNADKVHAVKVLSRLGLED-CFE-GIICFET  147 (298)
Q Consensus        97 ~~~~~~g~~~~L~~l~--~~~~ivS~~~~~~~~~~l~~l~l~~-~f~-~i~~~~~  147 (298)
                      .+...||+.++|+.+.  +.++|+|.+...++..+++.++... +|. .+++.++
T Consensus        73 ~v~~RPg~~eFL~~l~~~yeivI~Tas~~~yA~~vl~~LDp~~~~f~~ri~sr~~  127 (372)
T 3ef0_A           73 YIKFRPGLAQFLQKISELYELHIYTMGTKAYAKEVAKIIDPTGKLFQDRVLSRDD  127 (372)
T ss_dssp             EEEECTTHHHHHHHHHTTEEEEEECSSCHHHHHHHHHHHCTTSCSSSSCEECTTT
T ss_pred             EEEECcCHHHHHHHHhcCcEEEEEeCCcHHHHHHHHHHhccCCceeeeEEEEecC
Confidence            3567899999999985  6799999999999999999999877 787 4554443

>2zxe_A Na, K-ATPase alpha subunit; membrane protein, ION pump, ATPase, K+ binding, haloacid dehydrogenease superfamily, phosphate analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias} PDB: 3a3y_A* 3b8e_A* 3kdp_A* 3n2f_A* 3n23_A* 1mo7_A 1mo8_A* 1q3i_A

Probab=97.51  E-value=8.9e-05  Score=77.77  Aligned_cols=67  Identities=12%  Similarity=0.040  Sum_probs=46.0

Q ss_pred             CCCHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHHcCCeEEEecCCC--CCCCCCEEeCC--HHHHHHHh
Q 022360          206 KPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTVLIGKSQ--RVKGADYAFES--IHNIKEAI  272 (298)
Q Consensus       206 kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a~~aG~~~v~v~~~~--~~~~ad~i~~s--~~~l~~~l  272 (298)
                      ...|+-...+.+.+.-....++++||+.||+.|.+.|+++.+|...+.  .+..+|+++.+  ++.+.+.|
T Consensus       697 r~~P~~K~~iV~~lq~~g~~V~~iGDG~ND~paLk~AdvGIAmg~~gtd~ak~aAD~Vl~~~~~~~I~~~i  767 (1028)
T 2zxe_A          697 RTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGVAMGISGSDVSKQAADMILLDDNFASIVTGV  767 (1028)
T ss_dssp             SCCHHHHHHHHHHHHHTTCCEEEEECSGGGHHHHHHSSEEEEESSSCCHHHHHHCSEEETTCCTHHHHHHH
T ss_pred             EcCHHHHHHHHHHHHhCCCEEEEEcCCcchHHHHHhCCceEEeCCccCHHHHHhcCEEecCCCHHHHHHHH
Confidence            333444444444333334679999999999999999999999863333  46789999865  66565544

>1mhs_A Proton pump, plasma membrane ATPase; ION transport, membrane protein, P-type ATPase, active transport, cryo-electron microscopy; 8.00A {Neurospora crassa} SCOP: i.18.1.1

Probab=97.44  E-value=0.00017  Score=74.61  Aligned_cols=137  Identities=18%  Similarity=0.114  Sum_probs=81.0

Q ss_pred             CCChhHHHHHHhC---CCcEEEEeCCChHHHHHHHHHhCCCCccceeEeecCCCCCCCCCCCCChhhHHHHHhhhcccCC
Q 022360           99 KPDPVLRSLLLSL---PLRKIIFTNADKVHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSDDEDDIAFVESAASTTTS  175 (298)
Q Consensus        99 ~~~~g~~~~L~~l---~~~~~ivS~~~~~~~~~~l~~l~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  175 (298)
                      ++.|++.+.++.|   ++++.++|+.....+..+.+.+|+...+   +..+.. ...|.+-.++++..+.+..       
T Consensus       535 p~R~ea~~aI~~l~~aGI~v~MiTGD~~~TA~aIA~~lGI~~~~---~~~~~~-~~~g~~~~~~~el~~~~~~-------  603 (920)
T 1mhs_A          535 PPRHDTYKTVCEAKTLGLSIKMLTGDAVGIARETSRQLGLGTNI---YNAERL-GLGGGGDMPGSEVYDFVEA-------  603 (920)
T ss_dssp             CCCHHHHHHHHHHHHHTCEEEEEESSCHHHHHHHHHHHTSSCSC---CCSSSS-SSCBCCCGGGGGGGTTTTT-------
T ss_pred             cccccHHHHHHHHhhcCceEEEEcCCCHHHHHHHHHHcCCCccc---cCccce-eecCcccCCHHHHHHHHhh-------
Confidence            4678888888877   5889999999999999999999995321   101110 0111110111111110000       


Q ss_pred             CCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHHcCCeEEEecCCC-C
Q 022360          176 ANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTVLIGKSQ-R  254 (298)
Q Consensus       176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a~~aG~~~v~v~~~~-~  254 (298)
                               ...|..+      .      +.-|...++.+.++    ...++|+||+.||..|.+.++++.++.+... .
T Consensus       604 ---------~~V~arv------~------P~~K~~iV~~Lq~~----g~~Vam~GDGvNDapaLk~AdvGIAmg~gtd~a  658 (920)
T 1mhs_A          604 ---------ADGFAEV------F------PQHKYNVVEILQQR----GYLVAMTGDGVNDAPSLKKADTGIAVEGSSDAA  658 (920)
T ss_dssp             ---------TSCEESC------C------STHHHHHHHHHHTT----TCCCEECCCCGGGHHHHHHSSEEEEETTSCHHH
T ss_pred             ---------CeEEEEe------C------HHHHHHHHHHHHhC----CCeEEEEcCCcccHHHHHhCCcCcccccccHHH
Confidence                     0001111      0      23344555555432    4679999999999999999999999863222 3


Q ss_pred             CCCCCEEeC--CHHHHHHH
Q 022360          255 VKGADYAFE--SIHNIKEA  271 (298)
Q Consensus       255 ~~~ad~i~~--s~~~l~~~  271 (298)
                      +..+|+++.  ++..+.+.
T Consensus       659 k~aADiVl~~~~~~~I~~a  677 (920)
T 1mhs_A          659 RSAADIVFLAPGLGAIIDA  677 (920)
T ss_dssp             HHSSSEEESSCCSHHHHHH
T ss_pred             HHhcCeEEcCCCHHHHHHH
Confidence            678999885  45554443

>3ixz_A Potassium-transporting ATPase alpha; ION pump, H+, K+-ATPase, P-type ATPase, membrane protein, hydrolase, aluminium fluoride, ATP-binding; 6.50A {Sus scrofa} PDB: 2yn9_A 2xzb_A 1iwc_A 1iwf_A

Probab=97.31  E-value=0.00052  Score=72.02  Aligned_cols=64  Identities=11%  Similarity=0.010  Sum_probs=44.7

Q ss_pred             HHHHHHHHHHcCCCCCcEEEEcCCccchHHHHHcCCeEEEe-cC-CCCCCCCCEEeCCHH--HHHHHh
Q 022360          209 ELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTVLI-GK-SQRVKGADYAFESIH--NIKEAI  272 (298)
Q Consensus       209 ~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a~~aG~~~v~v-~~-~~~~~~ad~i~~s~~--~l~~~l  272 (298)
                      |.-...+.+.+.-....++++||+.||+.|.+.||++++|. +. ...+..||+++.+.+  .+...|
T Consensus       705 P~~K~~iv~~lq~~g~~V~a~GDG~ND~~mLk~A~vGIAMg~ng~d~aK~aAD~Vl~~~~~~gI~~ai  772 (1034)
T 3ixz_A          705 PQQKLVIVESCQRLGAIVAVTGDGVNDSPALKKADIGVAMGIAGSDAAKNAADMILLDDNFASIVTGV  772 (1034)
T ss_pred             HHHHHHHHHHHHHcCCEEEEECCcHHhHHHHHHCCeeEEeCCccCHHHHHhcCEEeccCCchHHHHHH
Confidence            33334444444333456999999999999999999999987 32 335889999997633  344444

>4as2_A Phosphorylcholine phosphatase; hydrolase, HAD superfamily, alkylammonium compounds; HET: BTB; 2.12A {Pseudomonas aeruginosa} PDB: 4as3_A*

Probab=97.09  E-value=0.001  Score=60.91  Aligned_cols=35  Identities=14%  Similarity=0.040  Sum_probs=30.2

Q ss_pred             CCChhHHHHHHhC---CCcEEEEeCCChHHHHHHHHHh
Q 022360           99 KPDPVLRSLLLSL---PLRKIIFTNADKVHAVKVLSRL  133 (298)
Q Consensus        99 ~~~~g~~~~L~~l---~~~~~ivS~~~~~~~~~~l~~l  133 (298)
                      ..+|+..++++.|   ++.++|+|++....++...+.+
T Consensus       143 ~~~~~~~~l~~~l~~~G~~v~ivSas~~~~v~~~a~~~  180 (327)
T 4as2_A          143 RVFSGQRELYNKLMENGIEVYVISAAHEELVRMVAADP  180 (327)
T ss_dssp             EECHHHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHTCG
T ss_pred             ccCHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHhhc
Confidence            4688999998887   4889999999999999999874

>2fue_A PMM 1, PMMH-22, phosphomannomutase 1; enzyme-product complex, protein glycosyl carbohydrate-deficient glycoprotein syndrome; HET: MSE M1P; 1.75A {Homo sapiens} SCOP: c.108.1.10 PDB: 2fuc_A*

Probab=97.03  E-value=0.00011  Score=64.61  Aligned_cols=42  Identities=5%  Similarity=-0.057  Sum_probs=36.0

Q ss_pred             CCCCHHHHHHHHHHcCCCCCcEEEEcC----CccchHHHHHcCCeEEEe
Q 022360          205 CKPSELAIEKALKIASINPQRTLFFED----SVRNIQAGKRVGLDTVLI  249 (298)
Q Consensus       205 ~kp~~~~~~~~l~~l~i~p~~~i~iGD----s~~Di~~a~~aG~~~v~v  249 (298)
                      +-.|..+++.+   +|++++++++|||    +.||++|.+.+|...+.+
T Consensus       195 ~vsKg~al~~l---~gi~~~~viafGDs~~~~~NDi~Ml~~~~~~g~av  240 (262)
T 2fue_A          195 GWDKRYCLDSL---DQDSFDTIHFFGNETSPGGNDFEIFADPRTVGHSV  240 (262)
T ss_dssp             TCSTTHHHHHH---TTSCCSEEEEEESCCSTTSTTHHHHHSTTSEEEEC
T ss_pred             CCCHHHHHHHH---HCCCHHHEEEECCCCCCCCCCHHHHhcCccCcEEe
Confidence            36667889988   8999999999999    999999999999755544

>3b8c_A ATPase 2, plasma membrane-type; P-type ATPase, proton pump, ATP-binding, hydrogen ION transport, hydrolase, ION transport; HET: ACP; 3.60A {Arabidopsis thaliana}

Probab=96.75  E-value=0.00053  Score=70.71  Aligned_cols=134  Identities=12%  Similarity=0.093  Sum_probs=77.9

Q ss_pred             CCChhHHHHHHhC---CCcEEEEeCCChHHHHHHHHHhCCCC-cc-ceeEeecCCCCCCCCCCCCChhhHHHHHhhhccc
Q 022360           99 KPDPVLRSLLLSL---PLRKIIFTNADKVHAVKVLSRLGLED-CF-EGIICFETLNPTHKNTVSDDEDDIAFVESAASTT  173 (298)
Q Consensus        99 ~~~~g~~~~L~~l---~~~~~ivS~~~~~~~~~~l~~l~l~~-~f-~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  173 (298)
                      ++.|++.+.++.|   ++++.++|+.....+..+.+.+|+.. .+ +.++...+...    .. ++....+.+....   
T Consensus       488 p~R~~a~~aI~~l~~aGI~v~MiTGD~~~tA~~iA~~lGi~~~~~~~~~l~g~~~~~----~~-~~~~l~~~~~~~~---  559 (885)
T 3b8c_A          488 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGTHKDA----NL-ASIPVEELIEKAD---  559 (885)
T ss_dssp             CCCHHHHHHHHHHHHTTCCCEEEESSCHHHHTHHHHTTTCTTCCSTTSSCCBGGGGT----TS-CCSCHHHHHHTSC---
T ss_pred             ccchhHHHHHHHHHHcCCcEEEEcCCChHHHHHHHHHhCCccccCCcceeecccccc----cc-chhHHHHHHhhCc---
Confidence            4578888877766   58899999999999999999999853 11 11111111100    00 0000111110000   


Q ss_pred             CCCCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHHcCCeEEEecCC-
Q 022360          174 TSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTVLIGKS-  252 (298)
Q Consensus       174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a~~aG~~~v~v~~~-  252 (298)
                                   -|..+      .      +.-|...++.+.+    ....+.|+||+.||..|.+.++++.++.... 
T Consensus       560 -------------v~arv------~------P~~K~~iV~~lq~----~g~~Vam~GDGvNDapaLk~AdvGIAmg~gtd  610 (885)
T 3b8c_A          560 -------------GFAGV------F------PEHKYEIVKKLQE----RKHIVGMTGDGVNDAPALKKADIGIAVADATD  610 (885)
T ss_dssp             -------------CEECC------C------HHHHHHHHHHHHH----TTCCCCBCCCSSTTHHHHHHSSSCCCCSSSHH
T ss_pred             -------------EEEEE------C------HHHHHHHHHHHHH----CCCeEEEEcCCchhHHHHHhCCEeEEeCCccH
Confidence                         01000      0      1223344554444    2467999999999999999999998886322 


Q ss_pred             CCCCCCCEEeCC--HHHHH
Q 022360          253 QRVKGADYAFES--IHNIK  269 (298)
Q Consensus       253 ~~~~~ad~i~~s--~~~l~  269 (298)
                      ..+..+|+++.+  +..+.
T Consensus       611 ~ak~aADivl~~~~~~~I~  629 (885)
T 3b8c_A          611 AARGASDIVLTEPGLSVII  629 (885)
T ss_dssp             HHGGGCSSCCSSCSHHHHT
T ss_pred             HHHHhcceeeccCchhHHH
Confidence            236788988855  55443

>1xpj_A Hypothetical protein; structural genomics, MCSG, protein STR initiative, PSI, midwest center for structural genomics, UN function; HET: TLA; 2.30A {Vibrio cholerae} SCOP: c.108.1.18

Probab=96.44  E-value=0.002  Score=50.30  Aligned_cols=17  Identities=35%  Similarity=0.442  Sum_probs=14.8

Q ss_pred             ccEEEEeCCCCccCCCc
Q 022360           14 YDCLLFDLDDTLYPYSS   30 (298)
Q Consensus        14 ~k~viFDlDGTL~d~~~   30 (298)
                      +|+|+||+||||+++..
T Consensus         1 ik~i~~DlDGTL~~~~~   17 (126)
T 1xpj_A            1 MKKLIVDLDGTLTQANT   17 (126)
T ss_dssp             CCEEEECSTTTTBCCCC
T ss_pred             CCEEEEecCCCCCCCCC
Confidence            47999999999998664

>3shq_A UBLCP1; phosphatase, hydrolase; 1.96A {Drosophila melanogaster}

Probab=96.43  E-value=0.0004  Score=63.33  Aligned_cols=40  Identities=18%  Similarity=0.200  Sum_probs=34.9

Q ss_pred             CCChhHHHHHHhCC--CcEEEEeCCChHHHHHHHHHhCCCCc
Q 022360           99 KPDPVLRSLLLSLP--LRKIIFTNADKVHAVKVLSRLGLEDC  138 (298)
Q Consensus        99 ~~~~g~~~~L~~l~--~~~~ivS~~~~~~~~~~l~~l~l~~~  138 (298)
                      ...||+.++|+.+.  +.++|.|.+...++..+++.++....
T Consensus       164 ~~RP~l~eFL~~l~~~yeivIfTas~~~ya~~vld~Ld~~~~  205 (320)
T 3shq_A          164 LMRPYLHEFLTSAYEDYDIVIWSATSMRWIEEKMRLLGVASN  205 (320)
T ss_dssp             HBCTTHHHHHHHHHHHEEEEEECSSCHHHHHHHHHHTTCTTC
T ss_pred             EeCCCHHHHHHHHHhCCEEEEEcCCcHHHHHHHHHHhCCCCC
Confidence            34589999999986  77999999999999999999987654

>2amy_A PMM 2, phosphomannomutase 2; HS.459855, HS.313504, BC008310, phosphatase, PFAM PF03332, H superfamily, jaecken disease; 2.09A {Homo sapiens} SCOP: c.108.1.10 PDB: 2q4r_A

Probab=96.32  E-value=0.0018  Score=56.01  Aligned_cols=43  Identities=7%  Similarity=-0.034  Sum_probs=34.0

Q ss_pred             CCCCHHHHHHHHHHcCCCCCcEEEEcC----CccchHHHHHcCCeEEEec
Q 022360          205 CKPSELAIEKALKIASINPQRTLFFED----SVRNIQAGKRVGLDTVLIG  250 (298)
Q Consensus       205 ~kp~~~~~~~~l~~l~i~p~~~i~iGD----s~~Di~~a~~aG~~~v~v~  250 (298)
                      +-.|..+++.+   +|++++++++|||    +.||++|.+.+|...+.++
T Consensus       186 ~~~Kg~al~~l---~~i~~~~viafGD~~~~~~ND~~Ml~~a~~ag~av~  232 (246)
T 2amy_A          186 GWDKRYCLRHV---ENDGYKTIYFFGDKTMPGGNDHEIFTDPRTMGYSVT  232 (246)
T ss_dssp             TCSGGGGGGGT---TTSCCSEEEEEECSCC---CCCHHHHCTTEEEEECS
T ss_pred             CCchHHHHHHH---hCCCHHHEEEECCCCCCCCCcHHHHHhCCcceEEee
Confidence            35667888888   8999999999999    9999999999987455443

>2amy_A PMM 2, phosphomannomutase 2; HS.459855, HS.313504, BC008310, phosphatase, PFAM PF03332, H superfamily, jaecken disease; 2.09A {Homo sapiens} SCOP: c.108.1.10 PDB: 2q4r_A

Probab=95.97  E-value=0.0019  Score=55.83  Aligned_cols=32  Identities=25%  Similarity=0.254  Sum_probs=26.7

Q ss_pred             ccCccEEEEeCCCCccCCCccHHHHHHHHHHH
Q 022360           11 AAKYDCLLFDLDDTLYPYSSGIAAACGQNIKD   42 (298)
Q Consensus        11 ~~~~k~viFDlDGTL~d~~~~~~~~~~~~~~~   42 (298)
                      .+++|+|+||+||||+++...+.....+++++
T Consensus         3 ~~~~kli~~DlDGTLl~~~~~i~~~~~~al~~   34 (246)
T 2amy_A            3 APGPALCLFDVDGTLTAPRQKITKEMDDFLQK   34 (246)
T ss_dssp             -CCSEEEEEESBTTTBCTTSCCCHHHHHHHHH
T ss_pred             CCCceEEEEECCCCcCCCCcccCHHHHHHHHH
Confidence            45689999999999999887787888877777

>2obb_A Hypothetical protein; structural genomics, PSI-2, PR structure initiative, midwest center for structural genomic unknown function; 2.20A {Bacteroides thetaiotaomicron} SCOP: c.108.1.25

Probab=95.78  E-value=0.0039  Score=49.99  Aligned_cols=17  Identities=18%  Similarity=0.190  Sum_probs=14.7

Q ss_pred             CccEEEEeCCCCccCCC
Q 022360           13 KYDCLLFDLDDTLYPYS   29 (298)
Q Consensus        13 ~~k~viFDlDGTL~d~~   29 (298)
                      ++++|+||+||||++..
T Consensus         2 ~~k~i~~DlDGTL~~~~   18 (142)
T 2obb_A            2 NAMTIAVDFDGTIVEHR   18 (142)
T ss_dssp             CCCEEEECCBTTTBCSC
T ss_pred             CCeEEEEECcCCCCCCC
Confidence            47899999999999854

>2fue_A PMM 1, PMMH-22, phosphomannomutase 1; enzyme-product complex, protein glycosyl carbohydrate-deficient glycoprotein syndrome; HET: MSE M1P; 1.75A {Homo sapiens} SCOP: c.108.1.10 PDB: 2fuc_A*

Probab=95.64  E-value=0.0052  Score=53.71  Aligned_cols=30  Identities=27%  Similarity=0.342  Sum_probs=25.4

Q ss_pred             CccEEEEeCCCCccCCCccHHHHHHHHHHH
Q 022360           13 KYDCLLFDLDDTLYPYSSGIAAACGQNIKD   42 (298)
Q Consensus        13 ~~k~viFDlDGTL~d~~~~~~~~~~~~~~~   42 (298)
                      ++|+|+||+||||+++...+.....+++++
T Consensus        12 ~~kli~~DlDGTLl~~~~~is~~~~~al~~   41 (262)
T 2fue_A           12 ERVLCLFDVDGTLTPARQKIDPEVAAFLQK   41 (262)
T ss_dssp             -CEEEEEESBTTTBSTTSCCCHHHHHHHHH
T ss_pred             CeEEEEEeCccCCCCCCCcCCHHHHHHHHH
Confidence            579999999999999888787888877777

>1s2o_A SPP, sucrose-phosphatase; phosphohydrolase, HAD superfamily, cyanobacteria; 1.40A {Synechocystis SP} SCOP: c.108.1.10 PDB: 1tj3_A 1tj4_A* 1tj5_A* 1u2s_A* 1u2t_A* 2b1q_A* 2b1r_A* 2d2v_A*

Probab=92.88  E-value=0.044  Score=47.18  Aligned_cols=14  Identities=36%  Similarity=0.349  Sum_probs=12.8

Q ss_pred             EEEEeCCCCccCCC
Q 022360           16 CLLFDLDDTLYPYS   29 (298)
Q Consensus        16 ~viFDlDGTL~d~~   29 (298)
                      +|+||+||||+++.
T Consensus         5 li~~DlDGTLl~~~   18 (244)
T 1s2o_A            5 LLISDLDNTWVGDQ   18 (244)
T ss_dssp             EEEECTBTTTBSCH
T ss_pred             EEEEeCCCCCcCCH
Confidence            89999999999965

>3geb_A EYES absent homolog 2; hydrolase, activator, alternative splicing, cytoplasm, developmental protein, magnesium, nucleus, polymorphism; 2.40A {Homo sapiens} PDB: 3hb0_A 3hb1_A

Probab=91.94  E-value=1.5  Score=38.17  Aligned_cols=41  Identities=15%  Similarity=0.142  Sum_probs=36.8

Q ss_pred             CCCHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHHcCCeEE
Q 022360          206 KPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTV  247 (298)
Q Consensus       206 kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a~~aG~~~v  247 (298)
                      -+|...|+++.+++| +....++|||+..-=++|+..+|+++
T Consensus       214 iGKesCFerI~~RFG-~k~~yvvIGDG~eEe~AAk~~n~PFw  254 (274)
T 3geb_A          214 TGKESCFERIMQRFG-RKAVYVVIGDGVEEEQGAKKHNMPFW  254 (274)
T ss_dssp             TCHHHHHHHHHHHHC-TTSEEEEEESSHHHHHHHHHTTCCEE
T ss_pred             cCHHHHHHHHHHHhC-CCceEEEECCCHHHHHHHHHcCCCeE
Confidence            346799999999998 55789999999999999999999999

>3ef1_A RNA polymerase II subunit A C-terminal domain phosphatase; CTD, FCPH, BRCT, hydrolase, BEF3, acylphosphate analog, cobalt, magnesium; HET: BFD; 2.15A {Schizosaccharomyces pombe}

Probab=87.99  E-value=0.23  Score=46.89  Aligned_cols=50  Identities=20%  Similarity=0.267  Sum_probs=41.7

Q ss_pred             CCCChhHHHHHHhCC--CcEEEEeCCChHHHHHHHHHhCCCC-ccce-eEeecC
Q 022360           98 LKPDPVLRSLLLSLP--LRKIIFTNADKVHAVKVLSRLGLED-CFEG-IICFET  147 (298)
Q Consensus        98 ~~~~~g~~~~L~~l~--~~~~ivS~~~~~~~~~~l~~l~l~~-~f~~-i~~~~~  147 (298)
                      +...||+.++|+.+.  +.++|+|.+...++..+++.++... +|.. +++.+.
T Consensus        82 V~~RPgl~eFL~~ls~~yEivIfTas~~~YA~~Vl~~LDp~~~~f~~Rl~sRd~  135 (442)
T 3ef1_A           82 IKFRPGLAQFLQKISELYELHIYTMGTKAYAKEVAKIIDPTGKLFQDRVLSRDD  135 (442)
T ss_dssp             EEECTTHHHHHHHHTTTEEEEEECSSCHHHHHHHHHHHCTTSTTTTTCEECTTT
T ss_pred             EEeCCCHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHHhccCCccccceEEEecC
Confidence            566899999999986  6799999999999999999999876 7876 444443

>2jc9_A Cytosolic purine 5'-nucleotidase; cytosolic 5-prime nucleotidase II, GMP-IMP specific nucleotidase, CN-II, NT5C2, hydrolase, polymorphism; HET: ADN; 1.5A {Homo sapiens} PDB: 2j2c_A* 2xje_A* 2xjf_A* 2jcm_A* 2xcw_A* 2xcv_A* 2xcx_A 2xjb_A* 2xjc_A* 2xjd_A*

Probab=81.95  E-value=1.4  Score=42.72  Aligned_cols=43  Identities=28%  Similarity=0.370  Sum_probs=29.5

Q ss_pred             cccCccEEEEeCCCCccCCCc-cHHHHHHHHHHHHHHHHhCCChh
Q 022360           10 AAAKYDCLLFDLDDTLYPYSS-GIAAACGQNIKDYMVEKLGIERS   53 (298)
Q Consensus        10 ~~~~~k~viFDlDGTL~d~~~-~~~~~~~~~~~~~~~~~~g~~~~   53 (298)
                      .+.+|++|.||||+||+.... .+..-..+...+++.+ .|++..
T Consensus        61 ~L~~I~~iGFDmDyTLa~Y~~~~~e~L~y~~~~~~LV~-~gYP~~  104 (555)
T 2jc9_A           61 AMEKIKCFGFDMDYTLAVYKSPEYESLGFELTVERLVS-IGYPQE  104 (555)
T ss_dssp             EGGGCCEEEECTBTTTBCBCTTHHHHHHHHHHHHHHHH-TTCCGG
T ss_pred             cccCCCEEEECCcccccccCcHHHHHHHHHHHHHHHHH-cCCChH
Confidence            346799999999999998753 4444444455555665 577654

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	298
d1qyia_	380	c.108.1.13 (A:) Hypothetical protein MW1667 (SA154	7e-10
d1o08a_	221	c.108.1.6 (A:) beta-Phosphoglucomutase {Lactococcu	1e-07
d1vjra_	261	c.108.1.14 (A:) Hypothetical protein TM1742 {Therm	1e-05
d1te2a_	218	c.108.1.6 (A:) Phosphatase YniC {Escherichia coli	1e-05
d2fdra1	222	c.108.1.6 (A:3-224) Hypothetical protein Atu0790 {	3e-05
d1zs9a1	253	c.108.1.22 (A:4-256) E-1 enzyme {Human(Homo sapien	5e-05
d2o2xa1	209	c.108.1.19 (A:8-216) Hypothetical protein Mll2559	5e-05
d2go7a1	204	c.108.1.6 (A:3-206) Hypothetical protein SP2064 {S	6e-05
d2hsza1	224	c.108.1.6 (A:1-224) Phosphoglycolate phosphatase G	1e-04
d2g80a1	225	c.108.1.22 (A:17-241) Protein UTR4 {Baker's yeast	1e-04
d2gfha1	247	c.108.1.6 (A:1-247) N-acylneuraminate-9-phosphatas	2e-04
d2fpwa1	161	c.108.1.19 (A:3-163) Histidine biosynthesis bifunc	2e-04
d1qq5a_	245	c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Xan	2e-04
d2b0ca1	197	c.108.1.2 (A:8-204) Putative phosphatase YihX {Esc	5e-04
d2hdoa1	207	c.108.1.6 (A:1-207) Phosphoglycolate phosphatase {	7e-04
d1cr6a1	222	c.108.1.2 (A:4-225) Epoxide hydrolase, N-terminal	7e-04
d2fi1a1	187	c.108.1.3 (A:4-190) Putative hydrolase SP0805 {Str	8e-04
d1u7pa_	164	c.108.1.17 (A:) Magnesium-dependent phosphatase-1,	9e-04

>d1qyia_ c.108.1.13 (A:) Hypothetical protein MW1667 (SA1546) {Staphylococcus aureus [TaxId: 1280]} Length = 380

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Hypothetical protein MW1667 (SA1546)
domain: Hypothetical protein MW1667 (SA1546)
species: Staphylococcus aureus [TaxId: 1280]

 Score = 56.7 bits (136), Expect = 7e-10
 Identities = 34/255 (13%), Positives = 71/255 (27%), Gaps = 44/255 (17%)

Query: 40  IKDYMVEKLGIERSKIEDL----GNLLYKNYGTTMAGLRAIGYDFDYDDYHSFVHGRLPY 95
           ++++   +L +  + +  L      L  + Y     G +            +F  G +  
Sbjct: 151 LEEFATTELHVSDATLFSLKGALWTLAQEVYQEWYLGSKLYEDVEKKIARTTFKTGYIYQ 210

Query: 96  EN-LKPDPVLRSLLLSLPLRKI---IFTNADKVHAVKVLSRLGLEDCFEGIICFETLNPT 151
           E  L+P   ++ LL  L        I T       V     LGL   FE           
Sbjct: 211 EIILRPVDEVKVLLNDLKGAGFELGIATGRPYTETVVPFENLGLLPYFEADFI------- 263

Query: 152 HKNTVSDDEDDIAFVESAASTTTSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELA 211
                +  +   A      +       P  +    +    +                   
Sbjct: 264 ----ATASDVLEAENMYPQARPLGKPNPFSYIAALYGNNRDK-------------YESYI 306

Query: 212 IEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTVLI-----GKSQRVK----GADYAF 262
            ++   +   N        DS+ ++ + +++G   +       GK    +     ADY  
Sbjct: 307 NKQDNIV---NKDDVFIVGDSLADLLSAQKIGATFIGTLTGLKGKDAAGELEAHHADYVI 363

Query: 263 ESIHNIKEAIPELWE 277
             +  ++  +  L E
Sbjct: 364 NHLGELRGVLDNLLE 378

>d1o08a_ c.108.1.6 (A:) beta-Phosphoglucomutase {Lactococcus lactis [TaxId: 1358]} Length = 221

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: beta-Phosphoglucomutase
species: Lactococcus lactis [TaxId: 1358]

 Score = 49.1 bits (115), Expect = 1e-07
 Identities = 13/58 (22%), Positives = 24/58 (41%), Gaps = 1/58 (1%)

Query: 221 INPQRTLFFEDSVRNIQAGKRVGLDTVLIGKSQRVKGADYAFESIHNIK-EAIPELWE 277
           + P  ++  EDS   IQA K  G   + +G+ + +           +   E + E+W 
Sbjct: 160 VAPSESIGLEDSQAGIQAIKDSGALPIGVGRPEDLGDDIVIVPDTSHYTLEFLKEVWL 217

>d1vjra_ c.108.1.14 (A:) Hypothetical protein TM1742 {Thermotoga maritima [TaxId: 2336]} Length = 261

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: NagD-like
domain: Hypothetical protein TM1742
species: Thermotoga maritima [TaxId: 2336]

 Score = 43.9 bits (102), Expect = 1e-05
 Identities = 43/269 (15%), Positives = 84/269 (31%), Gaps = 23/269 (8%)

Query: 13  KYDCLLFDLDDTLYPYSSGIAAACGQNIKDYMVEKLGIERSKIEDLGNLLYKNYGTTMAG 72
           K +  + D+D T Y   S +  +         +E L  +  +     N         +  
Sbjct: 6   KIELFILDMDGTFYLDDSLLPGSLE------FLETLKEKNKRFVFFTNNSSLGAQDYVRK 59

Query: 73  LRAIGYDFDYDDYHSFVHGRLPYENLKPDPVLRSLLLSLPLRKIIFTNADKVHAVKVLSR 132
           LR +G D   D   +       +  LK     R  LL  P  K +F     V   +    
Sbjct: 60  LRNMGVDVPDDAVVTSGEITAEH-MLKRFGRCRIFLLGTPQLKKVFEAYGHVIDEE---- 114

Query: 133 LGLEDCFEGIICFETLNPTHKNTVSDDEDDIAFVESAASTTTSANGPQIFDIIGHFAQPN 192
                 F  +   +TL                F  +        +        G      
Sbjct: 115 ---NPDFVVLGFDKTLTYERLKKACILLRKGKFYIATHPDINCPSKEGPVPDAGSIMAAI 171

Query: 193 PSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRN-IQAGKRVGLDTVLI-- 249
            +        IA KP+ L ++   +   +  +R     D +   ++ GK  G+ ++L+  
Sbjct: 172 EASTGRKPDLIAGKPNPLVVDVISEKFGVPKERMAMVGDRLYTDVKLGKNAGIVSILVLT 231

Query: 250 GKSQRVK------GADYAFESIHNIKEAI 272
           G++            D+ F+++  + +A+
Sbjct: 232 GETTPEDLERAETKPDFVFKNLGELAKAV 260

>d1te2a_ c.108.1.6 (A:) Phosphatase YniC {Escherichia coli [TaxId: 562]} Length = 218

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Phosphatase YniC
species: Escherichia coli [TaxId: 562]

 Score = 43.7 bits (101), Expect = 1e-05
 Identities = 10/60 (16%), Positives = 22/60 (36%), Gaps = 5/60 (8%)

Query: 214 KALKIASINPQRTLFFEDSVRNIQAGKRVGLDTVLIG-----KSQRVKGADYAFESIHNI 268
                  ++P   +  EDSV  + A K   + ++++         R   A+    S+  +
Sbjct: 152 DCAAKLGVDPLTCVALEDSVNGMIASKAARMRSIVVPAPEAQNDPRFVLANVKLSSLTEL 211

>d2fdra1 c.108.1.6 (A:3-224) Hypothetical protein Atu0790 {Agrobacterium tumefaciens [TaxId: 358]} Length = 222

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Hypothetical protein Atu0790
species: Agrobacterium tumefaciens [TaxId: 358]

 Score = 42.1 bits (97), Expect = 3e-05
 Identities = 12/66 (18%), Positives = 23/66 (34%), Gaps = 10/66 (15%)

Query: 222 NPQRTLFFEDSVRNIQAGKRVGLDTVLIGKSQRVK----------GADYAFESIHNIKEA 271
           +P R +  EDSV  I   +  G+  +    +              GA+     + ++   
Sbjct: 157 SPDRVVVVEDSVHGIHGARAAGMRVIGFTGASHTYPSHADRLTDAGAETVISRMQDLPAV 216

Query: 272 IPELWE 277
           I  + E
Sbjct: 217 IAAMAE 222

>d1zs9a1 c.108.1.22 (A:4-256) E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]} Length = 253

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Enolase-phosphatase E1
domain: E-1 enzyme
species: Human(Homo sapiens) [TaxId: 9606]

 Score = 41.7 bits (96), Expect = 5e-05
 Identities = 29/267 (10%), Positives = 63/267 (23%), Gaps = 28/267 (10%)

Query: 12  AKYDCLLFDLDDTLYPYSSGIAAACG---QNIKDYMVEKLGIERSK--IEDLGNLLYKNY 66
           A+   +L D++ T  P +           +N+K+Y+      E  +  +  L     ++ 
Sbjct: 5   AEVTVILLDIEGTTTPIAFVKDILFPYIEENVKEYLQTHWEEEECQQDVSLLRKQAEEDA 64

Query: 67  GTTMAGLRAIGYDFDYDDYHSFVHGRLPYENLKPDPVLRSLLLSLPLRKIIFTNADKVHA 126
               A           DD    +   +     +     ++  L      + +  A     
Sbjct: 65  HLDGAVPIPAASGNGVDDLQQMIQAVVDNVCWQMSLDRKTTALKQLQGHM-WRAAFTAGR 123

Query: 127 VKVLSRLGLEDCFEGIICFETLNPTHKNTVSDDEDDIAFVESAASTTTSANGPQIFDIIG 186
           +K      +                +  +    E        +            FD   
Sbjct: 124 MKAEFFADVVPAVRKWREAG--MKVYIYSSGSVEAQKLLFGHSTEGDILELVDGHFDTKI 181

Query: 187 HFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDT 246
                              K    +  K       +    LF  D  R   A +   +  
Sbjct: 182 G-----------------HKVESESYRKIADSIGCSTNNILFLTDVTREASAAEEADVHV 224

Query: 247 VLI---GKSQRVKGADYAFESIHNIKE 270
            ++   G +         +  I +  E
Sbjct: 225 AVVVRPGNAGLTDDEKTYYSLITSFSE 251

>d2o2xa1 c.108.1.19 (A:8-216) Hypothetical protein Mll2559 {Mesorhizobium loti [TaxId: 381]} Length = 209

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Histidinol phosphatase-like
domain: Hypothetical protein Mll2559
species: Mesorhizobium loti [TaxId: 381]

 Score = 41.1 bits (95), Expect = 5e-05
 Identities = 24/137 (17%), Positives = 45/137 (32%), Gaps = 1/137 (0%)

Query: 141 GIICFETLNPTHKNTVSDDEDDIAFVESAASTTTSANGPQIFDIIGHFAQPNPSLVALPK 200
           GI      N +            A V           G  +  ++               
Sbjct: 64  GIPVVVVTNQSGIARGYFGWSAFAAVNGRVLELLREEGVFVDMVLACAYHEAGVGPLAIP 123

Query: 201 TPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTVLIGKSQRVKGADY 260
                KP+   + +A K  +++ QR+L   D + ++QAGKR GL    +   +      +
Sbjct: 124 DHPMRKPNPGMLVEAGKRLALDLQRSLIVGDKLADMQAGKRAGLAQGWLVDGEAAVQPGF 183

Query: 261 AFESIHNIKEAIPELWE 277
           A   + +  E + +L  
Sbjct: 184 AIRPLRDSSE-LGDLLA 199

>d2go7a1 c.108.1.6 (A:3-206) Hypothetical protein SP2064 {Streptococcus pneumoniae [TaxId: 1313]} Length = 204

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Hypothetical protein SP2064
species: Streptococcus pneumoniae [TaxId: 1313]

 Score = 41.0 bits (94), Expect = 6e-05
 Identities = 6/52 (11%), Positives = 21/52 (40%), Gaps = 2/52 (3%)

Query: 222 NPQRTLFFEDSVRNIQAGKRVGLDTVLIGKSQRVKGADYAFESIHNIKEAIP 273
           N   T +  D   +++  +  G+ ++   +S      ++  +++ +I     
Sbjct: 153 NSDNTYYIGDRTLDVEFAQNSGIQSINFLESTY--EGNHRIQALADISRIFE 202

>d2hsza1 c.108.1.6 (A:1-224) Phosphoglycolate phosphatase Gph {Haemophilus somnus [TaxId: 731]} Length = 224

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Phosphoglycolate phosphatase Gph
species: Haemophilus somnus [TaxId: 731]

 Score = 40.7 bits (93), Expect = 1e-04
 Identities = 20/141 (14%), Positives = 44/141 (31%), Gaps = 9/141 (6%)

Query: 13  KYDCLLFDLDDTLYPYSSGIAAACGQNIKDYMVEKLGIERSKIEDLGNLLYKNYGTTMAG 72
           ++  + FDLD TL      +A +    +KD  + +                 +       
Sbjct: 3   QFKLIGFDLDGTLVNSLPDLALSINSALKDVNLPQASENLVMTWIGNGADVLSQRAVDWA 62

Query: 73  LRAIGYDFDYDDYHSFVHGRLPY------ENLKPDPVLRSLLLSLPLRKIIFTNA---DK 123
            +    +   D++  F      Y         +  P ++  L +L  +  I         
Sbjct: 63  CKQAEKELTEDEFKYFKRQFGFYYGENLCNISRLYPNVKETLEALKAQGYILAVVTNKPT 122

Query: 124 VHAVKVLSRLGLEDCFEGIIC 144
            H   +L+  G++  F  ++ 
Sbjct: 123 KHVQPILTAFGIDHLFSEMLG 143

>d2g80a1 c.108.1.22 (A:17-241) Protein UTR4 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 225

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Enolase-phosphatase E1
domain: Protein UTR4
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 40.2 bits (92), Expect = 1e-04
 Identities = 29/259 (11%), Positives = 60/259 (23%), Gaps = 37/259 (14%)

Query: 13  KYDCLLFDLDDTLYPYSSGIAAACGQNIKDYMVEKLGIERSKIEDLGNLLYKNYGTTMAG 72
            Y   L D++ T+ P      +   + +  Y   K+            L+ ++   +   
Sbjct: 2   NYSTYLLDIEGTVCP-----ISFVKETLFPYFTNKVP----------QLVQQDTRDSPV- 45

Query: 73  LRAIGYDFDYDDYHSFVHGRLPYENLKPDPVLRSLLLSLPLRKIIFTNADKVHAVKVLSR 132
              I   F  D+        L          +   L          +   K         
Sbjct: 46  -SNILSQFHIDNKEQLQAHILELVAKDVKDPILKQLQGYVWAHGYESGQIKAPVYADAID 104

Query: 133 LGLEDCFEGIICFETLNPTHKNTVSDDEDDIAFVESAASTTTSANGPQIFDIIGHFAQPN 192
                    I    ++           + +    +S              D+  +     
Sbjct: 105 FIKRKKRVFIYSSGSVKAQKLLFGYVQDPNAPAHDS-------------LDLNSYIDGYF 151

Query: 193 PSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTVLIGKS 252
               +  K          +    L+         LF  D+   + A   VG+ T L  + 
Sbjct: 152 DINTSGKK------TETQSYANILRDIGAKASEVLFLSDNPLELDAAAGVGIATGLASRP 205

Query: 253 QRVKGAD-YAFESIHNIKE 270
                 D   ++   N + 
Sbjct: 206 GNAPVPDGQKYQVYKNFET 224

>d2gfha1 c.108.1.6 (A:1-247) N-acylneuraminate-9-phosphatase NANP {Mouse (Mus musculus) [TaxId: 10090]} Length = 247

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: N-acylneuraminate-9-phosphatase NANP
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 39.8 bits (91), Expect = 2e-04
 Identities = 30/280 (10%), Positives = 65/280 (23%), Gaps = 53/280 (18%)

Query: 9   MAAAKYDCLLFDLDDTLYPYSSGIAAACGQNIKDYMVEKLGIERSKI------EDLGNLL 62
           M  ++   + FDLD+TL   +        + IK    +    E ++I        L    
Sbjct: 1   MGLSRVRAVFFDLDNTLIDTAGASRRGMLEVIKLLQSKYHYKEEAEIICDKVQVKLSKEC 60

Query: 63  YKNYGTTMAGLRAIGYDFDYDDYHSFVHGRLPYENLKPDPVLRSLLLSLPLRKIIFTNAD 122
           +  Y T +  +R   ++    +       R   E                     +    
Sbjct: 61  FHPYSTCITDVRTSHWEEAIQETKGGADNRKLAEE-------------------CYFLWK 101

Query: 123 KVHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSDDEDDIAFVESAASTTTSANGPQIF 182
                 ++    ++     +     L            + I      +       G +  
Sbjct: 102 STRLQHMILADDVKAMLTELRKEVRLLLLTNGDRQTQREKIEACACQSYFDAIVIGGEQK 161

Query: 183 DIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRN-IQAGKR 241
           +     +        L                      + P   +   D++   IQ G  
Sbjct: 162 EEKPAPSIFYHCCDLLG---------------------VQPGDCVMVGDTLETDIQGGLN 200

Query: 242 VGLDTVLI------GKSQRVKGADYAFESIHNIKEAIPEL 275
            GL   +                 Y   S+  +   +  +
Sbjct: 201 AGLKATVWINKSGRVPLTSSPMPHYMVSSVLELPALLQSI 240

>d2fpwa1 c.108.1.19 (A:3-163) Histidine biosynthesis bifunctional protein HisB, phosphatase domain {Escherichia coli [TaxId: 562]} Length = 161

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Histidinol phosphatase-like
domain: Histidine biosynthesis bifunctional protein HisB, phosphatase domain
species: Escherichia coli [TaxId: 562]

 Score = 38.7 bits (89), Expect = 2e-04
 Identities = 16/148 (10%), Positives = 43/148 (29%), Gaps = 10/148 (6%)

Query: 114 RKIIFTNAD--------KVHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSDDEDD--I 163
           +K +F + D            V    +L  E      +            +++ +     
Sbjct: 2   QKYLFIDRDGTLISEPPSDFQVDRFDKLAFEPGVIPQLLKLQKAGYKLVMITNQDGLGTQ 61

Query: 164 AFVESAASTTTSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINP 223
           +F ++      +            F +               KP    +E+ L   +++ 
Sbjct: 62  SFPQADFDGPHNLMMQIFTSQGVQFDEVLICPHLPADECDCRKPKVKLVERYLAEQAMDR 121

Query: 224 QRTLFFEDSVRNIQAGKRVGLDTVLIGK 251
             +    D   +IQ  + +G++ +   +
Sbjct: 122 ANSYVIGDRATDIQLAENMGINGLRYDR 149

>d1qq5a_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Xanthobacter autotrophicus [TaxId: 280]} Length = 245

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: HAD-related
domain: L-2-Haloacid dehalogenase, HAD
species: Xanthobacter autotrophicus [TaxId: 280]

 Score = 39.4 bits (90), Expect = 2e-04
 Identities = 7/45 (15%), Positives = 15/45 (33%)

Query: 205 CKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTVLI 249
            KP   +     ++  + P   LF   +  ++   K  G     +
Sbjct: 146 FKPHPDSYALVEEVLGVTPAEVLFVSSNGFDVGGAKNFGFSVARV 190

>d2b0ca1 c.108.1.2 (A:8-204) Putative phosphatase YihX {Escherichia coli [TaxId: 562]} Length = 197

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: YihX-like
domain: Putative phosphatase YihX
species: Escherichia coli [TaxId: 562]

 Score = 38.2 bits (87), Expect = 5e-04
 Identities = 25/236 (10%), Positives = 66/236 (27%), Gaps = 59/236 (25%)

Query: 18  LFDLDDTLYPYSSGIAAACGQNIKDYMVEKLGIERSKIEDLGNLLYKNYGTTMAGLRAIG 77
           +FDL + +             ++    +  L  +   + +  +   +   +  A   A+ 
Sbjct: 4   IFDLGNVIVDIDFNRVLGAWSDLTRIPLASL-KKSFHMGEAFHQHERGEISDEAFAEALC 62

Query: 78  YDFDYDDYHSFVHGRLPYENLKPDP---VLRSLLLSLPLRKIIFTNADKVHAVKVLSRL- 133
           ++      +           +   P    +   L     R ++ +N +++H         
Sbjct: 63  HEMALPLSYEQFSHGWQAVFVALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYP 122

Query: 134 GLEDCFEGIICFETLNPTHKNTVSDDEDDIAFVESAASTTTSANGPQIFDIIGHFAQPNP 193
            + D  + I   + L                               +I+  +      +P
Sbjct: 123 EIRDAADHIYLSQDLGMRKPE------------------------ARIYQHVLQAEGFSP 158

Query: 194 SLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTVLI 249
           S                               T+FF+D+  NI+   ++G+ ++L+
Sbjct: 159 S------------------------------DTVFFDDNADNIEGANQLGITSILV 184

>d2hdoa1 c.108.1.6 (A:1-207) Phosphoglycolate phosphatase {Lactobacillus plantarum [TaxId: 1590]} Length = 207

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Phosphoglycolate phosphatase
species: Lactobacillus plantarum [TaxId: 1590]

 Score = 38.0 bits (86), Expect = 7e-04
 Identities = 13/54 (24%), Positives = 22/54 (40%), Gaps = 4/54 (7%)

Query: 221 INPQRTLFFEDSVRNIQAGKRVGLDTVLI----GKSQRVKGADYAFESIHNIKE 270
           + PQ  LF  DSV + Q  +   +D  L       +   +   + F+   +I E
Sbjct: 152 VAPQNALFIGDSVSDEQTAQAANVDFGLAVWGMDPNADHQKVAHRFQKPLDILE 205

>d1cr6a1 c.108.1.2 (A:4-225) Epoxide hydrolase, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]} Length = 222

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: YihX-like
domain: Epoxide hydrolase, N-terminal domain
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 37.8 bits (86), Expect = 7e-04
 Identities = 29/234 (12%), Positives = 55/234 (23%), Gaps = 37/234 (15%)

Query: 17  LLFDLDDTLYPYSSGIAAACGQNIKDYMVEKLGIERSKIEDLGNLLYKNYGTTMAGLRAI 76
             FDLD  L      IA A          E L + R  +       Y+         + +
Sbjct: 3   AAFDLDGVLAL--PSIAGAF-----RRSEEALALPRDFLLGA----YQTEFPEGPTEQLM 51

Query: 77  GYDFDYDDYHSFVHGRLPYENLKPDPVLRSLLLSLPLRKIIFTNADKV-HAVKVLSRLGL 135
                +  +   +       +      L        +              ++    L  
Sbjct: 52  KGKITFSQWVPLMDESYRKSSKACGANLPENFSISQIFSQAMAARSINRPMLQAAIALKK 111

Query: 136 EDCFEGIICFETLNPTHKNTVSDDEDDIAFVESAASTTTSANGPQIFDIIGHFAQPNPSL 195
           +     I+    L+   K                             ++  HF       
Sbjct: 112 KGFTTCIVTNNWLDDGDKRDSLAQMM--------------------CELSQHFDFL---- 147

Query: 196 VALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTVLI 249
                     KP        L      P   +F +D   N++  + +G+ T+L+
Sbjct: 148 -IESCQVGMIKPEPQIYNFLLDTLKAKPNEVVFLDDFGSNLKPARDMGMVTILV 200

>d2fi1a1 c.108.1.3 (A:4-190) Putative hydrolase SP0805 {Streptococcus pneumoniae [TaxId: 1313]} Length = 187

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Phosphonoacetaldehyde hydrolase-like
domain: Putative hydrolase SP0805
species: Streptococcus pneumoniae [TaxId: 1313]

 Score = 37.4 bits (85), Expect = 8e-04
 Identities = 10/32 (31%), Positives = 13/32 (40%)

Query: 218 IASINPQRTLFFEDSVRNIQAGKRVGLDTVLI 249
                    L   D   +I+AG+  GLDT L 
Sbjct: 144 REKYQISSGLVIGDRPIDIEAGQAAGLDTHLF 175

>d1u7pa_ c.108.1.17 (A:) Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mus musculus) [TaxId: 10090]} Length = 164

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Magnesium-dependent phosphatase-1, Mdp1
domain: Magnesium-dependent phosphatase-1, Mdp1
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 37.1 bits (85), Expect = 9e-04
 Identities = 10/45 (22%), Positives = 18/45 (40%)

Query: 205 CKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTVLI 249
                   E+      +   + +FF+D  RNI    R+G+  + I
Sbjct: 97  PGSKVTHFERLHHKTGVPFSQMVFFDDENRNIIDVGRLGVTCIHI 141

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	298
d2hdoa1	207	Phosphoglycolate phosphatase {Lactobacillus planta	99.95
d2hsza1	224	Phosphoglycolate phosphatase Gph {Haemophilus somn	99.94
d1te2a_	218	Phosphatase YniC {Escherichia coli [TaxId: 562]}	99.93
d2gfha1	247	N-acylneuraminate-9-phosphatase NANP {Mouse (Mus m	99.93
d2ah5a1	210	predicted phosphatase SP0104 {Streptococcus pneumo	99.93
d2fdra1	222	Hypothetical protein Atu0790 {Agrobacterium tumefa	99.93
d1x42a1	230	Hypothetical protein PH0459 {Archaeon Pyrococcus h	99.93
d2hcfa1	228	Hypothetical protein CT1708 {Chlorobium tepidum [T	99.92
d1swva_	257	Phosphonoacetaldehyde hydrolase {Bacillus cereus [	99.92
d2go7a1	204	Hypothetical protein SP2064 {Streptococcus pneumon	99.92
d1qq5a_	245	L-2-Haloacid dehalogenase, HAD {Xanthobacter autot	99.92
d1zrna_	220	L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., s	99.91
d1o08a_	221	beta-Phosphoglucomutase {Lactococcus lactis [TaxId	99.9
d2fi1a1	187	Putative hydrolase SP0805 {Streptococcus pneumonia	99.88
d1zs9a1	253	E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]}	99.85
d2g80a1	225	Protein UTR4 {Baker's yeast (Saccharomyces cerevis	99.81
d1cr6a1	222	Epoxide hydrolase, N-terminal domain {Mouse (Mus m	99.8
d1zd3a1	225	Epoxide hydrolase, N-terminal domain {Human (Homo	99.79
d1u7pa_	164	Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mu	99.76
d2b0ca1	197	Putative phosphatase YihX {Escherichia coli [TaxId	99.76
d2feaa1	226	2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate	99.73
d1j97a_	210	Phosphoserine phosphatase {Archaeon Methanococcus	99.73
d2gmwa1	182	D,D-heptose 1,7-bisphosphate phosphatase GmhB {Esc	99.72
d2c4na1	250	NagD {Escherichia coli [TaxId: 562]}	99.69
d1wvia_	253	Putative phosphatase SMU.1415c {Streptococcus muta	99.67
d1vjra_	261	Hypothetical protein TM1742 {Thermotoga maritima [	99.66
d2o2xa1	209	Hypothetical protein Mll2559 {Mesorhizobium loti [	99.65
d1nnla_	217	Phosphoserine phosphatase {Human (Homo sapiens) [T	99.65
d1yv9a1	253	Putative hydrolase EF1188 {Enterococcus faecalis [	99.64
d2fpwa1	161	Histidine biosynthesis bifunctional protein HisB,	99.64
d1rkua_	206	Homoserine kinase ThrH {Pseudomonas aeruginosa [Ta	99.56
d1wr8a_	230	Phosphoglycolate phosphatase, PGPase {Pyrococcus h	99.48
d1qyia_	380	Hypothetical protein MW1667 (SA1546) {Staphylococc	99.46
d1nrwa_	285	Hypothetical protein YwpJ {Bacillus subtilis [TaxI	99.39
d1rlma_	269	Sugar phosphatase SupH (YbiV) {Escherichia coli [T	99.39
d1l6ra_	225	Phosphoglycolate phosphatase, PGPase {Archaeon The	99.37
d1rkqa_	271	Hypothetical protein YidA {Escherichia coli [TaxId	99.35
d1ltqa1	149	Polynucleotide kinase, phosphatase domain {Bacteri	99.32
d1nf2a_	267	Hypothetical protein TM0651 {Thermotoga maritima [	99.3
d2b30a1	283	PFL1270w orthologue {Plasmodium vivax [TaxId: 5855	99.27
d2rbka1	260	Sugar-phosphate phosphatase BT4131 {Bacteroides th	99.23
d1k1ea_	177	Probable phosphatase YrbI {Haemophilus influenzae,	99.19
d1wzca1	243	Putative mannosyl-3-phosphoglycerate phosphatase M	99.09
d1u02a_	229	Trehalose-6-phosphate phosphatase related protein	98.91
d2bdua1	291	Cytosolic 5'-nucleotidase III {Mouse (Mus musculus	98.83
d1xvia_	232	Putative mannosyl-3-phosphoglycerate phosphatase M	98.77
d1s2oa1	244	Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc	98.77
d1yj5a1	195	5' polynucleotide kinase-3' phosphatase, middle do	98.65
d2fuea1	244	Phosphomannomutase 1 {Human (Homo sapiens) [TaxId:	98.59
d2amya1	243	Phosphomannomutase 2 {Human (Homo sapiens) [TaxId:	98.45
d2b82a1	209	Class B acid phosphatase, AphA {Escherichia coli [	98.43
d2b8ea1	135	Cation-transporting ATPase {Archaeon Archaeoglobus	98.37
d2bdea1	458	Cytosolic IMP-GMP specific 5'-nucleotidase {Legion	98.19
d1q92a_	195	5'(3')-deoxyribonucleotidase (dNT-2) {Human (Homo	98.0
d1wpga2	168	Calcium ATPase, catalytic domain P {Rabbit (Orycto	97.68
d1y8aa1	308	Hypothetical protein AF1437 {Archaeon Archaeoglobu	97.06
d1xpja_	124	Hypothetical protein VC0232 {Vibrio cholerae [TaxI	95.51
d1ta0a_	181	Carboxy-terminal domain RNA polymerase II polypept	91.67
d1qyia_	380	Hypothetical protein MW1667 (SA1546) {Staphylococc	81.22
d2obba1	122	Hypothetical protein BT0820 {Bacteroides thetaiota	81.09

>d2hdoa1 c.108.1.6 (A:1-207) Phosphoglycolate phosphatase {Lactobacillus plantarum [TaxId: 1590]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Phosphoglycolate phosphatase
species: Lactobacillus plantarum [TaxId: 1590]

Probab=99.95  E-value=1.6e-27  Score=202.72  Aligned_cols=193  Identities=21%  Similarity=0.298  Sum_probs=148.5

Q ss_pred             cCccEEEEeCCCCccCCCccHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHhCCCHH-HHHHccCCCC-hhhHH---
Q 022360           12 AKYDCLLFDLDDTLYPYSSGIAAACGQNIKDYMVEKLGIERSKIEDLGNLLYKNYGTTMA-GLRAIGYDFD-YDDYH---   86 (298)
Q Consensus        12 ~~~k~viFDlDGTL~d~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~-~~~~~---   86 (298)
                      |++|+|+|||||||+|+.+.+..++..     +.+++|.+.....     ....++.... .+...+.... .+.+.   
T Consensus         1 M~~k~viFD~DGTL~ds~~~~~~a~~~-----~~~~~g~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   70 (207)
T d2hdoa1           1 MTYQALMFDIDGTLTNSQPAYTTVMRE-----VLATYGKPFSPAQ-----AQKTFPMAAEQAMTELGIAASEFDHFQAQY   70 (207)
T ss_dssp             CCCSEEEECSBTTTEECHHHHHHHHHH-----HHHTTTCCCCHHH-----HHHHTTSCHHHHHHHTTCCGGGHHHHHHHH
T ss_pred             CCCcEEEEeCCCCcCcCHHHHHHHHHH-----HHHHcCCCCCHHH-----HHHHhcchhhhhhhccccchhhHHHHHHHh
Confidence            568999999999999988877777765     4555677654432     2333344332 2233332211 12222   


Q ss_pred             -HHhhcccCCCCCCCChhHHHHHHhCC--CcEEEEeCCChHHHHHHHHHhCCCCccceeEeecCCCCCCCCCCCCChhhH
Q 022360           87 -SFVHGRLPYENLKPDPVLRSLLLSLP--LRKIIFTNADKVHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSDDEDDI  163 (298)
Q Consensus        87 -~~~~~~~~~~~~~~~~g~~~~L~~l~--~~~~ivS~~~~~~~~~~l~~l~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~  163 (298)
                       ..+..  ......++||+.++|+.|+  ++++|+||+....++..++++++..+|+.++++++.+.             
T Consensus        71 ~~~~~~--~~~~~~~~~g~~~~L~~l~~~~~~~ivT~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~-------------  135 (207)
T d2hdoa1          71 EDVMAS--HYDQIELYPGITSLFEQLPSELRLGIVTSQRRNELESGMRSYPFMMRMAVTISADDTPK-------------  135 (207)
T ss_dssp             HHHHTT--CGGGCEECTTHHHHHHHSCTTSEEEEECSSCHHHHHHHHTTSGGGGGEEEEECGGGSSC-------------
T ss_pred             hhhhcc--cccccccccchhhhhhhhccccccccccccccccccccccccccccccccccccccccc-------------
Confidence             22222  1245778999999999995  67889999999999999999999999999999988765             


Q ss_pred             HHHHhhhcccCCCCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHHcC
Q 022360          164 AFVESAASTTTSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVG  243 (298)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a~~aG  243 (298)
                                                               +||+|.++..+++++|++|++|++|||+.+|+++|+++|
T Consensus       136 -----------------------------------------~KP~p~~~~~~~~~~~~~~~~~l~VgDs~~Di~~a~~aG  174 (207)
T d2hdoa1         136 -----------------------------------------RKPDPLPLLTALEKVNVAPQNALFIGDSVSDEQTAQAAN  174 (207)
T ss_dssp             -----------------------------------------CTTSSHHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHT
T ss_pred             -----------------------------------------chhhhhhhcccccceeeeccceeEecCCHHHHHHHHHcC
Confidence                                                     799999999999999999999999999999999999999


Q ss_pred             CeEEEecCCCC----CCCCCEEeCCHHHHHH
Q 022360          244 LDTVLIGKSQR----VKGADYAFESIHNIKE  270 (298)
Q Consensus       244 ~~~v~v~~~~~----~~~ad~i~~s~~~l~~  270 (298)
                      +.++++.++..    ...++++++++.||.+
T Consensus       175 ~~~i~v~~g~~~~~~~~~~~~~i~~l~dll~  205 (207)
T d2hdoa1         175 VDFGLAVWGMDPNADHQKVAHRFQKPLDILE  205 (207)
T ss_dssp             CEEEEEGGGCCTTGGGSCCSEEESSGGGGGG
T ss_pred             CeEEEEecCCCChhHhhhcCcEeCCHHHHHh
Confidence            99999976543    4678999999888754

>d2hsza1 c.108.1.6 (A:1-224) Phosphoglycolate phosphatase Gph {Haemophilus somnus [TaxId: 731]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Phosphoglycolate phosphatase Gph
species: Haemophilus somnus [TaxId: 731]

Probab=99.94  E-value=2.3e-26  Score=196.24  Aligned_cols=198  Identities=17%  Similarity=0.229  Sum_probs=146.2

Q ss_pred             ccCccEEEEeCCCCccCCCccHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHhCCCHHH---------HHHccCCCC
Q 022360           11 AAKYDCLLFDLDDTLYPYSSGIAAACGQNIKDYMVEKLGIERSKIEDLGNLLYKNYGTTMAG---------LRAIGYDFD   81 (298)
Q Consensus        11 ~~~~k~viFDlDGTL~d~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~---------~~~~~~~~~   81 (298)
                      |.++|+|+||+||||+|+.+.+..++.+     ..+..|++........    ...+.....         .......+.
T Consensus         1 M~~~k~iiFD~DGTL~Ds~~~~~~a~~~-----~~~~~g~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~   71 (224)
T d2hsza1           1 MTQFKLIGFDLDGTLVNSLPDLALSINS-----ALKDVNLPQASENLVM----TWIGNGADVLSQRAVDWACKQAEKELT   71 (224)
T ss_dssp             CSSCSEEEECSBTTTEECHHHHHHHHHH-----HHHHTTCCCCCHHHHH----HHCSSCHHHHHHHHHHHHHHHHTCCCC
T ss_pred             CCCCCEEEEeCCCCcccCHHHHHHHHHH-----HHHHCCCCCCcHHHHH----HHhhhhhhhhhhhhhhhhhhhhhhhhh
Confidence            3468999999999999987777776665     3455565443322211    111222111         011111121


Q ss_pred             hhhHHH-------HhhcccCCCCCCCChhHHHHHHhCC---CcEEEEeCCChHHHHHHHHHhCCCCccceeEeecCCCCC
Q 022360           82 YDDYHS-------FVHGRLPYENLKPDPVLRSLLLSLP---LRKIIFTNADKVHAVKVLSRLGLEDCFEGIICFETLNPT  151 (298)
Q Consensus        82 ~~~~~~-------~~~~~~~~~~~~~~~g~~~~L~~l~---~~~~ivS~~~~~~~~~~l~~l~l~~~f~~i~~~~~~~~~  151 (298)
                      ...+..       .... .......++||+.++|..|+   ++++++||.....++..++++|+.++|+.++++++.+. 
T Consensus        72 ~~~~~~~~~~~~~~~~~-~~~~~~~l~~~~~~~L~~L~~~g~~~~i~tn~~~~~~~~~l~~~gl~~~f~~~~~~~~~~~-  149 (224)
T d2hsza1          72 EDEFKYFKRQFGFYYGE-NLCNISRLYPNVKETLEALKAQGYILAVVTNKPTKHVQPILTAFGIDHLFSEMLGGQSLPE-  149 (224)
T ss_dssp             HHHHHHHHHHHHHHHHH-HTTSSCEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGCSEEECTTTSSS-
T ss_pred             HHHHHHHHHHHHHHHHH-hhccccchHHHHHHHHHHHhccCCcccccccccHHHHHHHHHhcCchhhcccccccccccc-
Confidence            111111       1111 12345678999999988874   78999999999999999999999999999999988775 


Q ss_pred             CCCCCCCChhhHHHHHhhhcccCCCCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcC
Q 022360          152 HKNTVSDDEDDIAFVESAASTTTSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFED  231 (298)
Q Consensus       152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~p~~~i~iGD  231 (298)
                                                                           +||+|+.+..++++++++|++|++|||
T Consensus       150 -----------------------------------------------------~kp~p~~~~~~~~~~~~~~~~~~~igD  176 (224)
T d2hsza1         150 -----------------------------------------------------IKPHPAPFYYLCGKFGLYPKQILFVGD  176 (224)
T ss_dssp             -----------------------------------------------------CTTSSHHHHHHHHHHTCCGGGEEEEES
T ss_pred             -----------------------------------------------------ccccchhhHHHHHHhhhhhhccchhcC
Confidence                                                                 799999999999999999999999999


Q ss_pred             CccchHHHHHcCCeEEEecCCCC------CCCCCEEeCCHHHHHHHh
Q 022360          232 SVRNIQAGKRVGLDTVLIGKSQR------VKGADYAFESIHNIKEAI  272 (298)
Q Consensus       232 s~~Di~~a~~aG~~~v~v~~~~~------~~~ad~i~~s~~~l~~~l  272 (298)
                      +.+|+.+|+++|+.++++.++..      ...|+++++|+.||.++|
T Consensus       177 ~~~Di~~A~~aG~~~i~v~~g~~~~~~l~~~~~d~~v~~l~dL~~ii  223 (224)
T d2hsza1         177 SQNDIFAAHSAGCAVVGLTYGYNYNIPIAQSKPDWIFDDFADILKIT  223 (224)
T ss_dssp             SHHHHHHHHHHTCEEEEESSSCSTTCCGGGGCCSEEESSGGGGGGGT
T ss_pred             cHHHHHHHHHcCCeEEEEeCCCCCcchhhhcCCCEEECCHHHHHHhh
Confidence            99999999999999999987542      457999999999998776

>d1te2a_ c.108.1.6 (A:) Phosphatase YniC {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Phosphatase YniC
species: Escherichia coli [TaxId: 562]

Probab=99.93  E-value=3e-26  Score=195.64  Aligned_cols=192  Identities=17%  Similarity=0.166  Sum_probs=139.7

Q ss_pred             CccEEEEeCCCCccCCCccHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHhCCCHHHH-----HHcc-CCCChhhHH
Q 022360           13 KYDCLLFDLDDTLYPYSSGIAAACGQNIKDYMVEKLGIERSKIEDLGNLLYKNYGTTMAGL-----RAIG-YDFDYDDYH   86 (298)
Q Consensus        13 ~~k~viFDlDGTL~d~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~-----~~~~-~~~~~~~~~   86 (298)
                      +|+++|||+||||+|+.+.+..++..     +.+.+|++......+    ....+......     .... .......+.
T Consensus         2 ~i~a~iFD~DGTL~dt~~~~~~a~~~-----~~~~~g~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   72 (218)
T d1te2a_           2 QILAAIFDMDGLLIDSEPLWDRAELD-----VMASLGVDISRRNEL----PDTLGLRIDMVVDLWYARQPWNGPSRQEVV   72 (218)
T ss_dssp             CCCEEEECCBTTTBCCHHHHHHHHHH-----HHHHTTCCGGGGGGS----CCCTTCCHHHHHHHHHHHSCCSSSCHHHHH
T ss_pred             cceEEEECCCCcccCCHHHHHHHHHH-----HHHHcCCCCCHHHHH----HHHhCCCccchhhhhhhcccccchhHHHHH
Confidence            58999999999999976766666654     345567765442211    11112221111     0001 011111111


Q ss_pred             H----HhhcccCCCCCCCChhHHHHHHhCC---CcEEEEeCCChHHHHHHHHHhCCCCccceeEeecCCCCCCCCCCCCC
Q 022360           87 S----FVHGRLPYENLKPDPVLRSLLLSLP---LRKIIFTNADKVHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSDD  159 (298)
Q Consensus        87 ~----~~~~~~~~~~~~~~~g~~~~L~~l~---~~~~ivS~~~~~~~~~~l~~l~l~~~f~~i~~~~~~~~~~~~~~~~~  159 (298)
                      .    ..... ......++||+.++|+.|+   ++++|+||+....++..++++|+.++|+.++++++.+.         
T Consensus        73 ~~~~~~~~~~-~~~~~~~~pg~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~~~l~~~F~~i~~~~~~~~---------  142 (218)
T d1te2a_          73 ERVIARAISL-VEETRPLLPGVREAVALCKEQGLLVGLASASPLHMLEKVLTMFDLRDSFDALASAEKLPY---------  142 (218)
T ss_dssp             HHHHHHHHHH-HHHHCCBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCSEEEECTTSSC---------
T ss_pred             HHHHHHHHHh-hhccccccchHHHHHHHhhhcccccccccccccccccccccccccccccccccccccccc---------
Confidence            1    11110 1123456799999988874   88999999999999999999999999999999988775         


Q ss_pred             hhhHHHHHhhhcccCCCCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccchHHH
Q 022360          160 EDDIAFVESAASTTTSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAG  239 (298)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a  239 (298)
                                                                   +||+|+.|..+++++|++|++|++|||+.+|+.+|
T Consensus       143 ---------------------------------------------~Kp~~~~~~~~~~~l~~~~~~~l~igD~~~di~aA  177 (218)
T d1te2a_         143 ---------------------------------------------SKPHPQVYLDCAAKLGVDPLTCVALEDSVNGMIAS  177 (218)
T ss_dssp             ---------------------------------------------CTTSTHHHHHHHHHHTSCGGGEEEEESSHHHHHHH
T ss_pred             ---------------------------------------------chhhHHHHHHHHHHcCCCchhcEEEeeCHHHHHHH
Confidence                                                         79999999999999999999999999999999999


Q ss_pred             HHcCCeEEEecCCCC-----CCCCCEEeCCHHHH
Q 022360          240 KRVGLDTVLIGKSQR-----VKGADYAFESIHNI  268 (298)
Q Consensus       240 ~~aG~~~v~v~~~~~-----~~~ad~i~~s~~~l  268 (298)
                      +++|+.++++..+..     ...|+++++|+.||
T Consensus       178 ~~~G~~~i~v~~~~~~~~~~~~~a~~~i~~l~el  211 (218)
T d1te2a_         178 KAARMRSIVVPAPEAQNDPRFVLANVKLSSLTEL  211 (218)
T ss_dssp             HHTTCEEEECCCTTTTTCGGGGGSSEECSCGGGC
T ss_pred             HHcCCEEEEECCCCCccchhhcCCCEEECChhhC
Confidence            999999999966543     46789999999987

>d2gfha1 c.108.1.6 (A:1-247) N-acylneuraminate-9-phosphatase NANP {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: N-acylneuraminate-9-phosphatase NANP
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.93  E-value=6.8e-26  Score=197.05  Aligned_cols=213  Identities=16%  Similarity=0.230  Sum_probs=149.4

Q ss_pred             ccccCccEEEEeCCCCccCCCccHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHH--------hCCCHHHH-------
Q 022360            9 MAAAKYDCLLFDLDDTLYPYSSGIAAACGQNIKDYMVEKLGIERSKIEDLGNLLYKN--------YGTTMAGL-------   73 (298)
Q Consensus         9 ~~~~~~k~viFDlDGTL~d~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~--------~g~~~~~~-------   73 (298)
                      |.+.+||+|+||+||||+++...+..++...+.. +....+...... .........        +......+       
T Consensus         1 ~~m~~IKaviFD~dGTL~d~~~~~~~~~~~~~~~-~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (247)
T d2gfha1           1 MGLSRVRAVFFDLDNTLIDTAGASRRGMLEVIKL-LQSKYHYKEEAE-IICDKVQVKLSKECFHPYSTCITDVRTSHWEE   78 (247)
T ss_dssp             EECCCCCEEEECCBTTTBCHHHHHHHHHHHHHHH-HHHTTCCCTHHH-HHHHHHHHHHHTCCCC----CHHHHHHHHHHH
T ss_pred             CCCCCCcEEEEcCCCCcCcChHHHHHHHHHHHHH-hccccCcHHHHH-HHHHHHHHHHhhhhhhhhhhhhhHHHHHHHHH
Confidence            6788999999999999999777777776665554 333333332221 111111111        01111111       


Q ss_pred             --HHccCCCChhhHHHHh---hcccCCCCCCCChhHHHHHHhCC--CcEEEEeCCChHHHHHHHHHhCCCCccceeEeec
Q 022360           74 --RAIGYDFDYDDYHSFV---HGRLPYENLKPDPVLRSLLLSLP--LRKIIFTNADKVHAVKVLSRLGLEDCFEGIICFE  146 (298)
Q Consensus        74 --~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~g~~~~L~~l~--~~~~ivS~~~~~~~~~~l~~l~l~~~f~~i~~~~  146 (298)
                        ...+...+...+....   ..........++||+.++|+.|+  ++++++||++...+...++++|+..+|+.+++++
T Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~~~~~l~i~Tn~~~~~~~~~l~~~gl~~~fd~i~~s~  158 (247)
T d2gfha1          79 AIQETKGGADNRKLAEECYFLWKSTRLQHMILADDVKAMLTELRKEVRLLLLTNGDRQTQREKIEACACQSYFDAIVIGG  158 (247)
T ss_dssp             HHHHHHCSSCCHHHHHHHHHHHHHHHHHTCCCCHHHHHHHHHHHTTSEEEEEECSCHHHHHHHHHHHTCGGGCSEEEEGG
T ss_pred             HHHHhccccchHHHHHHHHHHHHHhhhccCccCccHHHHHHHhhcccceEEeecccchhhhhhhhhcccccccccccccc
Confidence              1111122211111110   00001234678999999999885  6789999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCCChhhHHHHHhhhcccCCCCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCCCCcE
Q 022360          147 TLNPTHKNTVSDDEDDIAFVESAASTTTSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRT  226 (298)
Q Consensus       147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~p~~~  226 (298)
                      +.+.                                                      +||+|.+|+.+++++|++|++|
T Consensus       159 ~~~~------------------------------------------------------~KP~p~~~~~~~~~~~~~~~~~  184 (247)
T d2gfha1         159 EQKE------------------------------------------------------EKPAPSIFYHCCDLLGVQPGDC  184 (247)
T ss_dssp             GSSS------------------------------------------------------CTTCHHHHHHHHHHHTCCGGGE
T ss_pred             cccc------------------------------------------------------chhhhhhHHHHHHHhhcCHHhc
Confidence            8875                                                      7999999999999999999999


Q ss_pred             EEEcCCc-cchHHHHHcCCeEEE-ecCCC-----CCCCCCEEeCCHHHHHHHhHHhhc
Q 022360          227 LFFEDSV-RNIQAGKRVGLDTVL-IGKSQ-----RVKGADYAFESIHNIKEAIPELWE  277 (298)
Q Consensus       227 i~iGDs~-~Di~~a~~aG~~~v~-v~~~~-----~~~~ad~i~~s~~~l~~~l~~~~~  277 (298)
                      ++|||+. +||.+|+++|+.++. .....     ....|++++.++.+|.++|+++-.
T Consensus       185 l~iGD~~~~Di~~A~~~G~~~~~~~~~~~~~~~~~~~~p~~~i~~l~eL~~ll~~i~~  242 (247)
T d2gfha1         185 VMVGDTLETDIQGGLNAGLKATVWINKSGRVPLTSSPMPHYMVSSVLELPALLQSIDC  242 (247)
T ss_dssp             EEEESCTTTHHHHHHHTTCSEEEEECTTCCCCSSCCCCCSEEESSGGGHHHHHHHHTT
T ss_pred             ceeccChHhHHHHHHHcCCeEEEEECCCCCCcccccCCCCEEECCHHHHHHHHHHHhh
Confidence            9999997 899999999998654 43322     256789999999999999998854

>d2ah5a1 c.108.1.6 (A:1-210) predicted phosphatase SP0104 {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: predicted phosphatase SP0104
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=99.93  E-value=6.9e-26  Score=192.30  Aligned_cols=196  Identities=19%  Similarity=0.241  Sum_probs=146.8

Q ss_pred             ccCccEEEEeCCCCccCCCccHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHhCCCHHHHHHccCCC-C----hhhH
Q 022360           11 AAKYDCLLFDLDDTLYPYSSGIAAACGQNIKDYMVEKLGIERSKIEDLGNLLYKNYGTTMAGLRAIGYDF-D----YDDY   85 (298)
Q Consensus        11 ~~~~k~viFDlDGTL~d~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~-~----~~~~   85 (298)
                      |.++|+|+||+||||+|+...+..++.+.     .+..|++....+.+    ....+............. .    ...+
T Consensus         1 M~~ik~VifD~DGTL~ds~~~~~~a~~~~-----~~~~g~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~   71 (210)
T d2ah5a1           1 MTSITAIFFDLDGTLVDSSIGIHNAFTYT-----FKELGVPSPDAKTI----RGFMGPPLESSFATCLSKDQISEAVQIY   71 (210)
T ss_dssp             CTTCCEEEECSBTTTEECHHHHHHHHHHH-----HHHHTCCCCCHHHH----HHTSSSCHHHHHHTTSCGGGHHHHHHHH
T ss_pred             CCCCCEEEEeCCCccccCHHHHHHHHHHH-----HHHCCCCCCCHHHH----HHhhhcchhhhccccccchhhHHHHHHH
Confidence            34689999999999999877777776653     44456654443322    222333333322111110 1    1112


Q ss_pred             HHHhhcccCCCCCCCChhHHHHHHhCC--CcEEEEeCCChHHHHHHHHHhCCCCccceeEeecCCCCCCCCCCCCChhhH
Q 022360           86 HSFVHGRLPYENLKPDPVLRSLLLSLP--LRKIIFTNADKVHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSDDEDDI  163 (298)
Q Consensus        86 ~~~~~~~~~~~~~~~~~g~~~~L~~l~--~~~~ivS~~~~~~~~~~l~~l~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~  163 (298)
                      ....... ......++|++.++|+.++  .+++++|++....++..++++|+..+|+.++++++.               
T Consensus        72 ~~~~~~~-~~~~~~~~~~~~~~l~~l~~~~~~~i~t~~~~~~~~~~l~~~gl~~~fd~v~~~~~~---------------  135 (210)
T d2ah5a1          72 RSYYKAK-GIYEAQLFPQIIDLLEELSSSYPLYITTTKDTSTAQDMAKNLEIHHFFDGIYGSSPE---------------  135 (210)
T ss_dssp             HHHHHHT-GGGSCEECTTHHHHHHHHHTTSCEEEEEEEEHHHHHHHHHHTTCGGGCSEEEEECSS---------------
T ss_pred             HHHHHhh-hhhcccchhHHHHHHhhhhcccchhhcccccchhhhHHHHhhccccccccccccccc---------------
Confidence            2222221 2245678999999999984  678999999999999999999999999999988754               


Q ss_pred             HHHHhhhcccCCCCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHHcC
Q 022360          164 AFVESAASTTTSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVG  243 (298)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a~~aG  243 (298)
                                                               +||+|+.+..+++++|++|++|++|||+.+|+.+|+++|
T Consensus       136 -----------------------------------------~~~~p~~~~~~~~~~~~~~~~~v~VGDs~~Di~aa~~aG  174 (210)
T d2ah5a1         136 -----------------------------------------APHKADVIHQALQTHQLAPEQAIIIGDTKFDMLGARETG  174 (210)
T ss_dssp             -----------------------------------------CCSHHHHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHT
T ss_pred             -----------------------------------------ccccccccchhhhhhhcccccceeecCCHHHHHHHHHcC
Confidence                                                     588999999999999999999999999999999999999


Q ss_pred             CeEEEecCCCC------CCCCCEEeCCHHHHHHHh
Q 022360          244 LDTVLIGKSQR------VKGADYAFESIHNIKEAI  272 (298)
Q Consensus       244 ~~~v~v~~~~~------~~~ad~i~~s~~~l~~~l  272 (298)
                      +.++++.+|..      ...||++++++.||.++|
T Consensus       175 i~~i~v~~g~~~~~~l~~~~pd~vi~~l~el~~~l  209 (210)
T d2ah5a1         175 IQKLAITWGFGEQADLLNYQPDYIAHKPLEVLAYF  209 (210)
T ss_dssp             CEEEEESSSSSCHHHHHTTCCSEEESSTTHHHHHT
T ss_pred             CeEEEEcCCCCCHHHHHhCCCCEEECCHHHHHHHh
Confidence            99999987653      567999999999998876

>d2fdra1 c.108.1.6 (A:3-224) Hypothetical protein Atu0790 {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Hypothetical protein Atu0790
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=99.93  E-value=6.9e-26  Score=193.93  Aligned_cols=201  Identities=18%  Similarity=0.225  Sum_probs=149.2

Q ss_pred             ccEEEEeCCCCccCCCccHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHhCCCHHHH-----HHccCCCChhhHH--
Q 022360           14 YDCLLFDLDDTLYPYSSGIAAACGQNIKDYMVEKLGIERSKIEDLGNLLYKNYGTTMAGL-----RAIGYDFDYDDYH--   86 (298)
Q Consensus        14 ~k~viFDlDGTL~d~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~-----~~~~~~~~~~~~~--   86 (298)
                      +|+||||+||||+|+...+..++.+     ..++.|++....+..    ....|.+....     ...+.......+.  
T Consensus         2 ~kaviFD~DGtL~dt~~~~~~a~~~-----~~~~~g~~~~~~~~~----~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~   72 (222)
T d2fdra1           2 FDLIIFDCDGVLVDSEIIAAQVESR-----LLTEAGYPISVEEMG----ERFAGMTWKNILLQVESEASIPLSASLLDKS   72 (222)
T ss_dssp             CSEEEECSBTTTBCCHHHHHHHHHH-----HHHHTTCCCCHHHHH----HHHTTCCHHHHHHHHHHHHCCCCCTHHHHHH
T ss_pred             ceEEEECCCCcccCCHHHHHHHHHH-----HHHHcCCCCCHHHHH----HHHhhhccccccccccccccccccccchhHH
Confidence            7899999999999987766666664     455567765432211    11223332221     2233333322222  


Q ss_pred             -HHhhcccCCCCCCCChhHHHHHHhCCCcEEEEeCCChHHHHHHHHHhCCCCccceeEeecC-CCCCCCCCCCCChhhHH
Q 022360           87 -SFVHGRLPYENLKPDPVLRSLLLSLPLRKIIFTNADKVHAVKVLSRLGLEDCFEGIICFET-LNPTHKNTVSDDEDDIA  164 (298)
Q Consensus        87 -~~~~~~~~~~~~~~~~g~~~~L~~l~~~~~ivS~~~~~~~~~~l~~l~l~~~f~~i~~~~~-~~~~~~~~~~~~~~~~~  164 (298)
                       ..+.... .....+.||+.++|+.++.+.+++|+.....++..++++++.++|+.++++.+ .+.              
T Consensus        73 ~~~~~~~~-~~~~~~~~g~~~~L~~l~~~~~i~t~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~--------------  137 (222)
T d2fdra1          73 EKLLDMRL-ERDVKIIDGVKFALSRLTTPRCICSNSSSHRLDMMLTKVGLKPYFAPHIYSAKDLGA--------------  137 (222)
T ss_dssp             HHHHHHHH-HHHCCBCTTHHHHHHHCCSCEEEEESSCHHHHHHHHHHTTCGGGTTTCEEEHHHHCT--------------
T ss_pred             HHHHHHHh-hhccchhhhHHHHhhhccccceeeeecchhhhhhhhcccccccccceeecccccccc--------------
Confidence             1221111 13467899999999999999999999999999999999999999998765532 221              


Q ss_pred             HHHhhhcccCCCCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHHcCC
Q 022360          165 FVESAASTTTSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGL  244 (298)
Q Consensus       165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a~~aG~  244 (298)
                                                            ..+||+|+.|..+++++|++|++|++|||+..|+.+|+++|+
T Consensus       138 --------------------------------------~~~KP~~~~~~~~~~~l~~~p~~~l~vgDs~~dv~aA~~aG~  179 (222)
T d2fdra1         138 --------------------------------------DRVKPKPDIFLHGAAQFGVSPDRVVVVEDSVHGIHGARAAGM  179 (222)
T ss_dssp             --------------------------------------TCCTTSSHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHTTC
T ss_pred             --------------------------------------cccccCHHHHHHHHHhhCCCCceEEEEcCCHHHHHHHHHcCC
Confidence                                                  016999999999999999999999999999999999999999


Q ss_pred             eEEEecCCCC----------CCCCCEEeCCHHHHHHHhHHhh
Q 022360          245 DTVLIGKSQR----------VKGADYAFESIHNIKEAIPELW  276 (298)
Q Consensus       245 ~~v~v~~~~~----------~~~ad~i~~s~~~l~~~l~~~~  276 (298)
                      .++++.++..          ..+|+++++|+.+|..+|.++.
T Consensus       180 ~~i~v~~~~~~~~~~~~~l~~~~ad~vi~~l~eL~~ll~~l~  221 (222)
T d2fdra1         180 RVIGFTGASHTYPSHADRLTDAGAETVISRMQDLPAVIAAMA  221 (222)
T ss_dssp             EEEEECCSTTCCTTHHHHHHHHTCSEEESCGGGHHHHHHHHT
T ss_pred             EEEEEccCCCCCcchHHHHHhCCCCEEECCHHHHHHHHHHhc
Confidence            9999977652          2469999999999999998874

>d1x42a1 c.108.1.1 (A:1-230) Hypothetical protein PH0459 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: HAD-related
domain: Hypothetical protein PH0459
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=99.93  E-value=4.5e-25  Score=190.36  Aligned_cols=124  Identities=22%  Similarity=0.348  Sum_probs=113.4

Q ss_pred             CCCChhHHHHHHhCC--CcEEEEeCCChHHHHHHHHHhCCCCccceeEeecCCCCCCCCCCCCChhhHHHHHhhhcccCC
Q 022360           98 LKPDPVLRSLLLSLP--LRKIIFTNADKVHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSDDEDDIAFVESAASTTTS  175 (298)
Q Consensus        98 ~~~~~g~~~~L~~l~--~~~~ivS~~~~~~~~~~l~~l~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  175 (298)
                      ..++||+.++|+.|+  ++++++||++...+...++.+|+.++|+.++++++.+.                         
T Consensus        99 ~~~~p~~~~~L~~l~~~~~i~i~Sn~~~~~~~~~l~~~gl~~~fd~i~~s~~~~~-------------------------  153 (230)
T d1x42a1          99 GELYPEVVEVLKSLKGKYHVGMITDSDTEYLMAHLDALGIKDLFDSITTSEEAGF-------------------------  153 (230)
T ss_dssp             CCBCTTHHHHHHHHBTTBEEEEEESSCHHHHHHHHHHHTCGGGCSEEEEHHHHTB-------------------------
T ss_pred             CcccccHHHHHHHhhccCceeeeeccccccchhhhcccccccccccccccccccc-------------------------
Confidence            577899999999885  77899999999999999999999999999999988775                         


Q ss_pred             CCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCc-cchHHHHHcCCeEEEecCCCC
Q 022360          176 ANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSV-RNIQAGKRVGLDTVLIGKSQR  254 (298)
Q Consensus       176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~p~~~i~iGDs~-~Di~~a~~aG~~~v~v~~~~~  254 (298)
                                                   +||+|++|..+++++|++|++|++|||+. +||++|+++|+.++++.++..
T Consensus       154 -----------------------------~KP~~~~~~~~~~~l~~~p~~~l~vgD~~~~Di~~A~~~G~~~v~v~~~~~  204 (230)
T d1x42a1         154 -----------------------------FKPHPRIFELALKKAGVKGEEAVYVGDNPVKDCGGSKNLGMTSILLDRKGE  204 (230)
T ss_dssp             -----------------------------CTTSHHHHHHHHHHHTCCGGGEEEEESCTTTTHHHHHTTTCEEEEECTTSC
T ss_pred             -----------------------------cchhhHHHHHHHhhhcccccccceeecCcHhHHHHHHHcCCEEEEECCCCC
Confidence                                         79999999999999999999999999996 899999999999999966543


Q ss_pred             ----CCCCCEEeCCHHHHHHHhHHh
Q 022360          255 ----VKGADYAFESIHNIKEAIPEL  275 (298)
Q Consensus       255 ----~~~ad~i~~s~~~l~~~l~~~  275 (298)
                          ...+++++.|+++|.++|++|
T Consensus       205 ~~~~~~~~d~~i~~l~el~~~l~~l  229 (230)
T d1x42a1         205 KREFWDKCDFIVSDLREVIKIVDEL  229 (230)
T ss_dssp             CGGGGGGSSEEESSTTHHHHHHHHH
T ss_pred             CcccccCCCEEECCHHHHHHHHHHc
Confidence                457899999999999999876

>d2hcfa1 c.108.1.6 (A:2-229) Hypothetical protein CT1708 {Chlorobium tepidum [TaxId: 1097]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Hypothetical protein CT1708
species: Chlorobium tepidum [TaxId: 1097]

Probab=99.92  E-value=1.3e-25  Score=193.32  Aligned_cols=208  Identities=13%  Similarity=0.129  Sum_probs=147.7

Q ss_pred             ccEEEEeCCCCccCCCccHHHHHHHHHHHHHHHHh-----CCChhHHHHHHHHHHHHhCCCHHHHHHccCCCChhhHHHH
Q 022360           14 YDCLLFDLDDTLYPYSSGIAAACGQNIKDYMVEKL-----GIERSKIEDLGNLLYKNYGTTMAGLRAIGYDFDYDDYHSF   88 (298)
Q Consensus        14 ~k~viFDlDGTL~d~~~~~~~~~~~~~~~~~~~~~-----g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~   88 (298)
                      .|+|+||+||||+++...+..++.+.+.+......     ..................+......... +....+.+...
T Consensus         2 ~klviFD~DGTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~   80 (228)
T d2hcfa1           2 RTLVLFDIDGTLLKVESMNRRVLADALIEVYGTEGSTGSHDFSGKMDGAIIYEVLSNVGLERAEIADK-FDKAKETYIAL   80 (228)
T ss_dssp             CEEEEECCBTTTEEECTHHHHHHHHHHHHHHSCCCCC---CCTTCCHHHHHHHHHHTTTCCHHHHHHH-HHHHHHHHHHH
T ss_pred             ceEEEEeCCCCcccCHHHHHHHHHHHHHHHcCCCccHHHHHHhcCchHHHHHHHHHHhCCChHHHHHH-HHHHHHHHHHH
Confidence            57899999999999988888888776655321110     0111011112222333333332221110 00012223333


Q ss_pred             hhcccCCCCCCCChhHHHHHHhCC----CcEEEEeCCChHHHHHHHHHhCCCCccceeEeecCCCCCCCCCCCCChhhHH
Q 022360           89 VHGRLPYENLKPDPVLRSLLLSLP----LRKIIFTNADKVHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSDDEDDIA  164 (298)
Q Consensus        89 ~~~~~~~~~~~~~~g~~~~L~~l~----~~~~ivS~~~~~~~~~~l~~l~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~  164 (298)
                      +.+........++||+.++|+.|+    ++++|+|+.....+...++.+|+.++|+.++++++...              
T Consensus        81 ~~~~~~~~~~~~~~g~~~~L~~L~~~g~~~~~v~t~~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~--------------  146 (228)
T d2hcfa1          81 FRERARREDITLLEGVRELLDALSSRSDVLLGLLTGNFEASGRHKLKLPGIDHYFPFGAFADDALD--------------  146 (228)
T ss_dssp             HHHHCCGGGEEECTTHHHHHHHHHTCTTEEEEEECSSCHHHHHHHHHTTTCSTTCSCEECTTTCSS--------------
T ss_pred             HHHHhhccCceecCchHHHHhhhhccccccccccCCCcchhhhhhhhhhccccccccccccccccc--------------
Confidence            333333345678999999999873    56789999999999999999999999999998877654              


Q ss_pred             HHHhhhcccCCCCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHc---CCCCCcEEEEcCCccchHHHHH
Q 022360          165 FVESAASTTTSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIA---SINPQRTLFFEDSVRNIQAGKR  241 (298)
Q Consensus       165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l---~i~p~~~i~iGDs~~Di~~a~~  241 (298)
                                                              .||+|..+...++.+   +++|++|+||||+.+|+.+|++
T Consensus       147 ----------------------------------------~k~~p~~~~~~~~~~~~~~~~p~~~l~VGD~~~Di~aA~~  186 (228)
T d2hcfa1         147 ----------------------------------------RNELPHIALERARRMTGANYSPSQIVIIGDTEHDIRCARE  186 (228)
T ss_dssp             ----------------------------------------GGGHHHHHHHHHHHHHCCCCCGGGEEEEESSHHHHHHHHT
T ss_pred             ----------------------------------------ccchhHHHHHHhhhhcccCCChhHheeecCChHHHHHHHH
Confidence                                                    588888766665555   7899999999999999999999


Q ss_pred             cCCeEEEecCCCC------CCCCCEEeCCHHHHHHHhHHhh
Q 022360          242 VGLDTVLIGKSQR------VKGADYAFESIHNIKEAIPELW  276 (298)
Q Consensus       242 aG~~~v~v~~~~~------~~~ad~i~~s~~~l~~~l~~~~  276 (298)
                      +|+.++++.++..      ..+||++++|+.+|.++|..++
T Consensus       187 aG~~~i~v~~g~~~~~~l~~~~ad~vi~~~~el~~~l~~l~  227 (228)
T d2hcfa1         187 LDARSIAVATGNFTMEELARHKPGTLFKNFAETDEVLASIL  227 (228)
T ss_dssp             TTCEEEEECCSSSCHHHHHTTCCSEEESCSCCHHHHHHHHH
T ss_pred             cCCEEEEEcCCCCCHHHHhhCCCCEEECCHHHHHHHHHHHh
Confidence            9999999987652      5679999999999999999886

>d1swva_ c.108.1.3 (A:) Phosphonoacetaldehyde hydrolase {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Phosphonoacetaldehyde hydrolase-like
domain: Phosphonoacetaldehyde hydrolase
species: Bacillus cereus [TaxId: 1396]

Probab=99.92  E-value=4.8e-25  Score=193.09  Aligned_cols=126  Identities=13%  Similarity=0.176  Sum_probs=111.8

Q ss_pred             CCCCCChhHHHHHHhCC---CcEEEEeCCChHHHHHHHHHhCCCCcc-ceeEeecCCCCCCCCCCCCChhhHHHHHhhhc
Q 022360           96 ENLKPDPVLRSLLLSLP---LRKIIFTNADKVHAVKVLSRLGLEDCF-EGIICFETLNPTHKNTVSDDEDDIAFVESAAS  171 (298)
Q Consensus        96 ~~~~~~~g~~~~L~~l~---~~~~ivS~~~~~~~~~~l~~l~l~~~f-~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  171 (298)
                      ....++||+.++|+.|+   ++++|+||.+...+...++++++..+| +.++++++.+.                     
T Consensus        96 ~~~~~~~g~~~~L~~Lk~~g~~i~i~Tn~~~~~~~~~l~~~~l~~~f~d~~~~~d~~~~---------------------  154 (257)
T d1swva_          96 RYASPINGVKEVIASLRERGIKIGSTTGYTREMMDIVAKEAALQGYKPDFLVTPDDVPA---------------------  154 (257)
T ss_dssp             GGCCBCTTHHHHHHHHHHTTCEEEEBCSSCHHHHHHHHHHHHHTTCCCSCCBCGGGSSC---------------------
T ss_pred             ccCccCCcHHHHHHHHHhcccceeecCCCchhhHHHHHHHHhhcccccccccccccccc---------------------
Confidence            34678999999999884   789999999999999999999999887 77888887664                     


Q ss_pred             ccCCCCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCC-CCcEEEEcCCccchHHHHHcCCeEEEec
Q 022360          172 TTTSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASIN-PQRTLFFEDSVRNIQAGKRVGLDTVLIG  250 (298)
Q Consensus       172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~-p~~~i~iGDs~~Di~~a~~aG~~~v~v~  250 (298)
                                                       +||+|+.|..+++++|+. +++|+||||+.+||.+|+++|+.+|++.
T Consensus       155 ---------------------------------~KP~p~~~~~~~~~l~~~p~~~~v~VgDs~~Di~aA~~aG~~ti~v~  201 (257)
T d1swva_         155 ---------------------------------GRPYPWMCYKNAMELGVYPMNHMIKVGDTVSDMKEGRNAGMWTVGVI  201 (257)
T ss_dssp             ---------------------------------CTTSSHHHHHHHHHHTCCSGGGEEEEESSHHHHHHHHHTTSEEEEEC
T ss_pred             ---------------------------------cccChHHHHHHHHHhCCCCcceEEEEeCChhhHHHHHHCCCEEEEEc
Confidence                                             799999999999999995 5899999999999999999999999997


Q ss_pred             CCCC-----------------------------CCCCCEEeCCHHHHHHHhHHh
Q 022360          251 KSQR-----------------------------VKGADYAFESIHNIKEAIPEL  275 (298)
Q Consensus       251 ~~~~-----------------------------~~~ad~i~~s~~~l~~~l~~~  275 (298)
                      +|..                             ..+||++++++.||..+|+.+
T Consensus       202 ~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gad~vi~~l~eL~~ii~~~  255 (257)
T d1swva_         202 LGSSELGLTEEEVENMDSVELREKIEVVRNRFVENGAHFTIETMQELESVMEHI  255 (257)
T ss_dssp             TTCTTTCCCHHHHHHSCHHHHHHHHHHHHHHHHHTTCSEEESSGGGHHHHHHHH
T ss_pred             cCCCCCCCCHHHHhhCCHHHHHHHHHHHHHHHHhCCCCEEECCHHHHHHHHHHH
Confidence            7642                             245999999999999999876

>d2go7a1 c.108.1.6 (A:3-206) Hypothetical protein SP2064 {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Hypothetical protein SP2064
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=99.92  E-value=1.9e-25  Score=189.05  Aligned_cols=192  Identities=17%  Similarity=0.267  Sum_probs=138.8

Q ss_pred             cEEEEeCCCCccCCCccHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHhCCCHHHH-HHc--cCCCChhhHHHH---
Q 022360           15 DCLLFDLDDTLYPYSSGIAAACGQNIKDYMVEKLGIERSKIEDLGNLLYKNYGTTMAGL-RAI--GYDFDYDDYHSF---   88 (298)
Q Consensus        15 k~viFDlDGTL~d~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~-~~~--~~~~~~~~~~~~---   88 (298)
                      ++++||+||||+|+.+.+..++.+     ..+++|++...... ...+.   +...... ..+  ....+.+.+...   
T Consensus         2 ~a~iFD~DGTL~ds~~~~~~a~~~-----~~~~~g~~~~~~~~-~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~   72 (204)
T d2go7a1           2 TAFIWDLDGTLLDSYEAILSGIEE-----TFAQFSIPYDKEKV-REFIF---KYSVQDLLVRVAEDRNLDVEVLNQVRAQ   72 (204)
T ss_dssp             CEEEECTBTTTEECHHHHHHHHHH-----HHHHHTCCCCHHHH-HHHHH---HSCHHHHHHHHHHHHTCCHHHHHHHHHH
T ss_pred             EEEEEcCCCcCccCHHHHHHHHHH-----HHHHcCCCCCHHHH-HHhhc---ccccccccccccchhhhhHHHHHHHHHH
Confidence            689999999999987777777765     34455665443221 11111   1111111 110  111122222221   


Q ss_pred             hhcccCCCCCCCChhHHHHHHhCC---CcEEEEeCCChHHHHHHHHHhCCCCccceeEeecCCCCCCCCCCCCChhhHHH
Q 022360           89 VHGRLPYENLKPDPVLRSLLLSLP---LRKIIFTNADKVHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSDDEDDIAF  165 (298)
Q Consensus        89 ~~~~~~~~~~~~~~g~~~~L~~l~---~~~~ivS~~~~~~~~~~l~~l~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~  165 (298)
                      .... ......++||+.++|+.|+   ++++|+||+... ...+++++|+.+||+.++++++.+.               
T Consensus        73 ~~~~-~~~~~~~~pgv~~~L~~L~~~g~~~~v~Sn~~~~-~~~~l~~~gl~~~f~~i~~s~~~~~---------------  135 (204)
T d2go7a1          73 SLAE-KNAQVVLMPGAREVLAWADESGIQQFIYTHKGNN-AFTILKDLGVESYFTEILTSQSGFV---------------  135 (204)
T ss_dssp             HHTT-CGGGCEECTTHHHHHHHHHHTTCEEEEECSSCTH-HHHHHHHHTCGGGEEEEECGGGCCC---------------
T ss_pred             HHHh-hcccCcccchHHhhhhcccccccchhhhcccchh-hhhhhhhcccccccccccccccccc---------------
Confidence            1111 1245678899999988874   889999998764 5678999999999999999887765               


Q ss_pred             HHhhhcccCCCCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHHcCCe
Q 022360          166 VESAASTTTSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLD  245 (298)
Q Consensus       166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a~~aG~~  245 (298)
                                                             +||+|++|+.+++++|++|++|++|||+.+|+.+|+++|+.
T Consensus       136 ---------------------------------------~Kp~~~~~~~~~~~~~~~p~~~l~VgD~~~Di~~A~~~G~~  176 (204)
T d2go7a1         136 ---------------------------------------RKPSPEAATYLLDKYQLNSDNTYYIGDRTLDVEFAQNSGIQ  176 (204)
T ss_dssp             ---------------------------------------CTTSSHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHHTCE
T ss_pred             ---------------------------------------cchhHHHHHHHHHHhCCCCceEEEEeCCHHHHHHHHHcCCe
Confidence                                                   79999999999999999999999999999999999999999


Q ss_pred             EEEecCCCCCCCCCEEeCCHHHHHHHhH
Q 022360          246 TVLIGKSQRVKGADYAFESIHNIKEAIP  273 (298)
Q Consensus       246 ~v~v~~~~~~~~ad~i~~s~~~l~~~l~  273 (298)
                      ++++.++.  ..+++.++++.+|.++++
T Consensus       177 ~i~v~~~~--~~~~~~~~~~~dl~~l~~  202 (204)
T d2go7a1         177 SINFLEST--YEGNHRIQALADISRIFE  202 (204)
T ss_dssp             EEESSCCS--CTTEEECSSTTHHHHHTS
T ss_pred             EEEEcCCC--CCcCeecCCHHHHHHHhc
Confidence            99997664  457889999999887663

>d1qq5a_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Xanthobacter autotrophicus [TaxId: 280]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: HAD-related
domain: L-2-Haloacid dehalogenase, HAD
species: Xanthobacter autotrophicus [TaxId: 280]

Probab=99.92  E-value=4.6e-24  Score=184.46  Aligned_cols=126  Identities=17%  Similarity=0.345  Sum_probs=114.0

Q ss_pred             CCCCCChhHHHHHHhCC-CcEEEEeCCChHHHHHHHHHhCCCCccceeEeecCCCCCCCCCCCCChhhHHHHHhhhcccC
Q 022360           96 ENLKPDPVLRSLLLSLP-LRKIIFTNADKVHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSDDEDDIAFVESAASTTT  174 (298)
Q Consensus        96 ~~~~~~~g~~~~L~~l~-~~~~ivS~~~~~~~~~~l~~l~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  174 (298)
                      ....++|++.++|+.++ ..++++|++....+...++++++..+|+.++++++++.                        
T Consensus        90 ~~~~~~~~~~~~L~~l~~~~~~v~s~~~~~~~~~~~~~~~~~~~fd~v~~s~~~~~------------------------  145 (245)
T d1qq5a_          90 NRLTPYPDAAQCLAELAPLKRAILSNGAPDMLQALVANAGLTDSFDAVISVDAKRV------------------------  145 (245)
T ss_dssp             GSCCBCTTHHHHHHHHTTSEEEEEESSCHHHHHHHHHHTTCGGGCSEEEEGGGGTC------------------------
T ss_pred             cccccchhhhHHHHHHhhhceeEEeccchHHHHHHHhhcccccccccccccccccc------------------------
Confidence            45688999999999975 67889999999999999999999999999999998876                        


Q ss_pred             CCCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHHcCCeEEEecCCC-
Q 022360          175 SANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTVLIGKSQ-  253 (298)
Q Consensus       175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a~~aG~~~v~v~~~~-  253 (298)
                                                    .||+|++|..+++++|++|++|++|||+.+||.+|+++|+.++++.++. 
T Consensus       146 ------------------------------~KP~p~~f~~a~~~lg~~p~e~l~VgD~~~di~~A~~aG~~tv~v~r~~~  195 (245)
T d1qq5a_         146 ------------------------------FKPHPDSYALVEEVLGVTPAEVLFVSSNGFDVGGAKNFGFSVARVARLSQ  195 (245)
T ss_dssp             ------------------------------CTTSHHHHHHHHHHHCCCGGGEEEEESCHHHHHHHHHHTCEEEEECCSCH
T ss_pred             ------------------------------cCccHHHHHHHHHHhCCChhhEEEEeCCHHHHHHHHHcCCeEEEEcCCCc
Confidence                                          7999999999999999999999999999999999999999999996532 


Q ss_pred             ---------------------------CCCCCCEEeCCHHHHHHHhHHh
Q 022360          254 ---------------------------RVKGADYAFESIHNIKEAIPEL  275 (298)
Q Consensus       254 ---------------------------~~~~ad~i~~s~~~l~~~l~~~  275 (298)
                                                 ....||++++++.||.++|+.+
T Consensus       196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pd~~i~~l~el~~lv~~~  244 (245)
T d1qq5a_         196 EALARELVSGTIAPLTMFKALRMREETYAEAPDFVVPALGDLPRLVRGM  244 (245)
T ss_dssp             HHHHHHTTSSSCCHHHHHHHHHSSCCTTSCCCSEEESSGGGHHHHHHHH
T ss_pred             ccccccccccccccchhhhhhhhhhhhccCCCCEEECCHHHHHHHHHhh
Confidence                                       1356999999999999999865

>d1zrna_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., strain YL [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: HAD-related
domain: L-2-Haloacid dehalogenase, HAD
species: Pseudomonas sp., strain YL [TaxId: 306]

Probab=99.91  E-value=1.5e-23  Score=178.51  Aligned_cols=121  Identities=21%  Similarity=0.319  Sum_probs=107.4

Q ss_pred             CCCCChhHHHHHHhC---CCcEEEEeCCChHHHHHHHHHhCCCCccceeEeecCCCCCCCCCCCCChhhHHHHHhhhccc
Q 022360           97 NLKPDPVLRSLLLSL---PLRKIIFTNADKVHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSDDEDDIAFVESAASTT  173 (298)
Q Consensus        97 ~~~~~~g~~~~L~~l---~~~~~ivS~~~~~~~~~~l~~l~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  173 (298)
                      ...++|++.++|+.+   +++++++|+.....++..+++.++..+|+.++++++.+.                       
T Consensus        91 ~~~~~~~~~~~l~~l~~~~~~~~i~tn~~~~~~~~~~~~~~~~~~fd~~~~s~~~~~-----------------------  147 (220)
T d1zrna_          91 RLAPFSEVPDSLRELKRRGLKLAILSNGSPQSIDAVVSHAGLRDGFDHLLSVDPVQV-----------------------  147 (220)
T ss_dssp             GCEECTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCSEEEESGGGTC-----------------------
T ss_pred             cccccchhHHHHHHHHhcCCeEEeecchHHHHHHHHHhhccccccccceeeeeeeec-----------------------
Confidence            356678887777776   478999999999999999999999999999999998876                       


Q ss_pred             CCCCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHHcCCeEEEecCCC
Q 022360          174 TSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTVLIGKSQ  253 (298)
Q Consensus       174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a~~aG~~~v~v~~~~  253 (298)
                                                     .||+|+.|..+++++|++|++|+||||+..|+.+|+++|+.++++.++.
T Consensus       148 -------------------------------~KP~p~~~~~~~~~~g~~p~e~l~VgD~~~Di~~A~~aG~~~v~v~r~~  196 (220)
T d1zrna_         148 -------------------------------YKPDNRVYELAEQALGLDRSAILFVASNAWDATGARYFGFPTCWINRTG  196 (220)
T ss_dssp             -------------------------------CTTSHHHHHHHHHHHTSCGGGEEEEESCHHHHHHHHHHTCCEEEECTTC
T ss_pred             -------------------------------cccHHHHHHHHHHHhCCCCceEEEEecChHhHHHHHHcCCEEEEEcCCC
Confidence                                           7999999999999999999999999999999999999999999996543


Q ss_pred             -----CCCCCCEEeCCHHHHHHH
Q 022360          254 -----RVKGADYAFESIHNIKEA  271 (298)
Q Consensus       254 -----~~~~ad~i~~s~~~l~~~  271 (298)
                           ....||++++|+.+|.++
T Consensus       197 ~~~~~~~~~~d~~i~~l~el~~l  219 (220)
T d1zrna_         197 NVFEEMGQTPDWEVTSLRAVVEL  219 (220)
T ss_dssp             CCCCSSSCCCSEEESSHHHHHTT
T ss_pred             CCcccccCCCCEEECCHHHHHhh
Confidence                 245689999999998763

>d1o08a_ c.108.1.6 (A:) beta-Phosphoglucomutase {Lactococcus lactis [TaxId: 1358]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: beta-Phosphoglucomutase
species: Lactococcus lactis [TaxId: 1358]

Probab=99.90  E-value=4.5e-25  Score=188.66  Aligned_cols=198  Identities=18%  Similarity=0.242  Sum_probs=137.7

Q ss_pred             CccEEEEeCCCCccCCCccHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHH-hCCCHHHH-----HHccCCCChhhHH
Q 022360           13 KYDCLLFDLDDTLYPYSSGIAAACGQNIKDYMVEKLGIERSKIEDLGNLLYKN-YGTTMAGL-----RAIGYDFDYDDYH   86 (298)
Q Consensus        13 ~~k~viFDlDGTL~d~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~-~g~~~~~~-----~~~~~~~~~~~~~   86 (298)
                      |||+|+||+||||+|+...+..++..     +.+..|++......     ... .+......     ...+...+.+.+.
T Consensus         1 MikaiiFD~DGTL~ds~~~~~~a~~~-----~~~~~g~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   70 (221)
T d1o08a_           1 MFKAVLFDLDGVITDTAEYHFRAWKA-----LAEEIGINGVDRQF-----NEQLKGVSREDSLQKILDLADKKVSAEEFK   70 (221)
T ss_dssp             CCCEEEECCBTTTBTHHHHHHHHHHH-----HHHHTTCCCCCHHH-----HTTTTTCCHHHHHHHHHTTSSSCCCHHHHH
T ss_pred             CCcEEEEcCCCCeEcCHHHHHHHHHH-----HHHHcCCCCChHHH-----HHHHhhccchhhhhhccccccccchhhhhh
Confidence            58999999999999976666666654     34455654433211     111 11111111     1112233333222


Q ss_pred             HH-------hhccc-CCCCCCCChhHHHHHHhCC---CcEEEEeCCChHHHHHHHHHhCCCCccceeEeecCCCCCCCCC
Q 022360           87 SF-------VHGRL-PYENLKPDPVLRSLLLSLP---LRKIIFTNADKVHAVKVLSRLGLEDCFEGIICFETLNPTHKNT  155 (298)
Q Consensus        87 ~~-------~~~~~-~~~~~~~~~g~~~~L~~l~---~~~~ivS~~~~~~~~~~l~~l~l~~~f~~i~~~~~~~~~~~~~  155 (298)
                      ..       +.+.+ .....+++||+.++|+.|+   .+++++|++.  .....++.+++.++|+.++++++.+.     
T Consensus        71 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~~l~~~~~~i~i~s~~~--~~~~~l~~~~l~~~f~~i~~~~~~~~-----  143 (221)
T d1o08a_          71 ELAKRKNDNYVKMIQDVSPADVYPGILQLLKDLRSNKIKIALASASK--NGPFLLERMNLTGYFDAIADPAEVAA-----  143 (221)
T ss_dssp             HHHHHHHHHHHHHTTTCCGGGBCTTHHHHHHHHHHTTCEEEECCSCT--THHHHHHHTTCGGGCSEECCTTTSSS-----
T ss_pred             hHHHHHHhhccccccccccccccCCceeccccccccccceEEEeecc--hhhHHHHhhccccccccccccccccc-----
Confidence            11       11111 1234678899999998875   6788888764  45788999999999999999887765     


Q ss_pred             CCCChhhHHHHHhhhcccCCCCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccc
Q 022360          156 VSDDEDDIAFVESAASTTTSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRN  235 (298)
Q Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~D  235 (298)
                                                                       +||+|++|+.+++++|++|++|++|||+.+|
T Consensus       144 -------------------------------------------------~KP~~~~~~~~l~~~~i~~~~~l~VgD~~~d  174 (221)
T d1o08a_         144 -------------------------------------------------SKPAPDIFIAAAHAVGVAPSESIGLEDSQAG  174 (221)
T ss_dssp             -------------------------------------------------CTTSTHHHHHHHHHTTCCGGGEEEEESSHHH
T ss_pred             -------------------------------------------------cccChHHHHHHHHHcCCCCceEEEEecCHHH
Confidence                                                             7999999999999999999999999999999


Q ss_pred             hHHHHHcCCeEEEecCCCCCCCCCEEeCCHHHH-HHHhHHhh
Q 022360          236 IQAGKRVGLDTVLIGKSQRVKGADYAFESIHNI-KEAIPELW  276 (298)
Q Consensus       236 i~~a~~aG~~~v~v~~~~~~~~ad~i~~s~~~l-~~~l~~~~  276 (298)
                      +++|+++|+.+++++++.....++.+++++.++ .+.|.++|
T Consensus       175 i~~A~~aG~~~i~v~~~~~~~~~~~~~~~~~~~~~~~l~el~  216 (221)
T d1o08a_         175 IQAIKDSGALPIGVGRPEDLGDDIVIVPDTSHYTLEFLKEVW  216 (221)
T ss_dssp             HHHHHHHTCEEEEESCHHHHCSSSEEESSGGGCCHHHHHHHH
T ss_pred             HHHHHHcCCEEEEECChhhcccccEEcCCcccCCHHHHHHHH
Confidence            999999999999998877666677777776653 34455554

>d2fi1a1 c.108.1.3 (A:4-190) Putative hydrolase SP0805 {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Phosphonoacetaldehyde hydrolase-like
domain: Putative hydrolase SP0805
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=99.88  E-value=9.5e-23  Score=170.73  Aligned_cols=171  Identities=18%  Similarity=0.208  Sum_probs=122.4

Q ss_pred             cCccEEEEeCCCCccCCCccHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHhCCCHHH-HHHccCCC--ChhhHHHH
Q 022360           12 AKYDCLLFDLDDTLYPYSSGIAAACGQNIKDYMVEKLGIERSKIEDLGNLLYKNYGTTMAG-LRAIGYDF--DYDDYHSF   88 (298)
Q Consensus        12 ~~~k~viFDlDGTL~d~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~--~~~~~~~~   88 (298)
                      |++|+|+||+||||+|+...+..++.+     +.+..|++......     ....+..... +..+....  ..+.+.+.
T Consensus         1 M~~k~viFD~DGTL~dt~~~~~~~~~~-----~~~~~g~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   70 (187)
T d2fi1a1           1 MKYHDYIWDLGGTLLDNYETSTAAFVE-----TLALYGITQDHDSV-----YQALKVSTPFAIETFAPNLENFLEKYKEN   70 (187)
T ss_dssp             CCCSEEEECTBTTTBCHHHHHHHHHHH-----HHHHTTCCCCHHHH-----HHHHHHCHHHHHHHHCTTCTTHHHHHHHH
T ss_pred             CCCCEEEEeCCCCcccCHHHHHHHHHH-----HHHHcCCCccHHHH-----HhhhhccchhhhhhhhHHHHHHHHHHHHH
Confidence            579999999999999976666666654     44556776543221     1222222211 22222211  12233332


Q ss_pred             hhcccCCCCCCCChhHHHHHHhC---CCcEEEEeCCChHHHHHHHHHhCCCCccceeEeecCCCCCCCCCCCCChhhHHH
Q 022360           89 VHGRLPYENLKPDPVLRSLLLSL---PLRKIIFTNADKVHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSDDEDDIAF  165 (298)
Q Consensus        89 ~~~~~~~~~~~~~~g~~~~L~~l---~~~~~ivS~~~~~~~~~~l~~l~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~  165 (298)
                      ....  .....++||+.++|+.+   +.+++|+||...... ..++++++..+|+.++++++++.               
T Consensus        71 ~~~~--~~~~~~~~gv~~~l~~l~~~g~~~~i~Sn~~~~~~-~~l~~~~l~~~fd~i~~~~~~~~---------------  132 (187)
T d2fi1a1          71 EARE--LEHPILFEGVSDLLEDISNQGGRHFLVSHRNDQVL-EILEKTSIAAYFTEVVTSSSGFK---------------  132 (187)
T ss_dssp             HHHH--TTSCCBCTTHHHHHHHHHHTTCEEEEECSSCTHHH-HHHHHTTCGGGEEEEECGGGCCC---------------
T ss_pred             HHHH--hhcCcccchhHHHHHHHHhhhccccccccCccchh-hhhhhhccccccccccccccccc---------------
Confidence            2222  23567889999998766   488999999877655 57899999999999999987764               


Q ss_pred             HHhhhcccCCCCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHHcCCe
Q 022360          166 VESAASTTTSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLD  245 (298)
Q Consensus       166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a~~aG~~  245 (298)
                                                             .||+|+.+..++++++++  +|++|||+.+|+++|+++|+.
T Consensus       133 ---------------------------------------~KP~p~~~~~~~~~~~~~--~~l~vgDs~~Di~aA~~aG~~  171 (187)
T d2fi1a1         133 ---------------------------------------RKPNPESMLYLREKYQIS--SGLVIGDRPIDIEAGQAAGLD  171 (187)
T ss_dssp             ---------------------------------------CTTSCHHHHHHHHHTTCS--SEEEEESSHHHHHHHHHTTCE
T ss_pred             ---------------------------------------cCCCHHHHHHHHHHcCCC--CeEEEeCCHHHHHHHHHcCCE
Confidence                                                   799999999999999874  599999999999999999999


Q ss_pred             EEEecC
Q 022360          246 TVLIGK  251 (298)
Q Consensus       246 ~v~v~~  251 (298)
                      ++++..
T Consensus       172 ~i~v~~  177 (187)
T d2fi1a1         172 THLFTS  177 (187)
T ss_dssp             EEECSC
T ss_pred             EEEECC
Confidence            997754

>d1zs9a1 c.108.1.22 (A:4-256) E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Enolase-phosphatase E1
domain: E-1 enzyme
species: Human(Homo sapiens) [TaxId: 9606]

Probab=99.85  E-value=5e-21  Score=164.26  Aligned_cols=119  Identities=11%  Similarity=0.061  Sum_probs=101.1

Q ss_pred             CCCCCChhHHHHHHhC---CCcEEEEeCCChHHHHHHHHHhCCCCccceeEee-cCCCCCCCCCCCCChhhHHHHHhhhc
Q 022360           96 ENLKPDPVLRSLLLSL---PLRKIIFTNADKVHAVKVLSRLGLEDCFEGIICF-ETLNPTHKNTVSDDEDDIAFVESAAS  171 (298)
Q Consensus        96 ~~~~~~~g~~~~L~~l---~~~~~ivS~~~~~~~~~~l~~l~l~~~f~~i~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~  171 (298)
                      ....++||+.++|..|   +++++|+||+....++..++..++.++|+..... ++...                     
T Consensus       124 ~~~~~~pg~~e~l~~L~~~g~~l~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~---------------------  182 (253)
T d1zs9a1         124 MKAEFFADVVPAVRKWREAGMKVYIYSSGSVEAQKLLFGHSTEGDILELVDGHFDTKIG---------------------  182 (253)
T ss_dssp             CCBCCCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHTBTTBCCGGGCSEEECGGGC---------------------
T ss_pred             cccccCCCHHHHHHHHhhccCceeecCCCcHHHHHHHHHHcCcchhhhhcceeeccccc---------------------
Confidence            3467899999999987   4889999999999999999999998888866544 33322                     


Q ss_pred             ccCCCCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHHcCCeEEEecC
Q 022360          172 TTTSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTVLIGK  251 (298)
Q Consensus       172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a~~aG~~~v~v~~  251 (298)
                                                       +||+|.+|..+++++|++|++|+||||+.+||.+|+++|+.++++.+
T Consensus       183 ---------------------------------~KP~p~~~~~~~~~~~~~p~~~l~vgD~~~dv~aA~~aG~~ti~v~r  229 (253)
T d1zs9a1         183 ---------------------------------HKVESESYRKIADSIGCSTNNILFLTDVTREASAAEEADVHVAVVVR  229 (253)
T ss_dssp             ---------------------------------CTTCHHHHHHHHHHHTSCGGGEEEEESCHHHHHHHHHTTCEEEEECC
T ss_pred             ---------------------------------cCCCcHHHHHHHHHhCCCcCcEEEEeCCHHHHHHHHHcCCEEEEEeC
Confidence                                             69999999999999999999999999999999999999999999965


Q ss_pred             CCC------CCCCCEEeCCHHHH
Q 022360          252 SQR------VKGADYAFESIHNI  268 (298)
Q Consensus       252 ~~~------~~~ad~i~~s~~~l  268 (298)
                      +..      ...++.+++|+.||
T Consensus       230 ~g~~~~~~~~~~~~~~i~sl~EL  252 (253)
T d1zs9a1         230 PGNAGLTDDEKTYYSLITSFSEL  252 (253)
T ss_dssp             TTCCCCCHHHHHHSCEESSGGGC
T ss_pred             CCCCCCchhhcCCCcEECChHHh
Confidence            432      34567789998875

>d2g80a1 c.108.1.22 (A:17-241) Protein UTR4 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Enolase-phosphatase E1
domain: Protein UTR4
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.81  E-value=6e-19  Score=149.31  Aligned_cols=117  Identities=13%  Similarity=0.141  Sum_probs=91.9

Q ss_pred             CCCCCChhHHHHHHhCCCcEEEEeCCChHHHHHH-----------HHHhCCCCccceeEeecCCCCCCCCCCCCChhhHH
Q 022360           96 ENLKPDPVLRSLLLSLPLRKIIFTNADKVHAVKV-----------LSRLGLEDCFEGIICFETLNPTHKNTVSDDEDDIA  164 (298)
Q Consensus        96 ~~~~~~~g~~~~L~~l~~~~~ivS~~~~~~~~~~-----------l~~l~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~  164 (298)
                      ....+++++.+++..... .++.++.........           ++.+++.++|+.+++++..+               
T Consensus        94 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~Fd~v~~~~~~~---------------  157 (225)
T d2g80a1          94 IKAPVYADAIDFIKRKKR-VFIYSSGSVKAQKLLFGYVQDPNAPAHDSLDLNSYIDGYFDINTSG---------------  157 (225)
T ss_dssp             CCBCCCHHHHHHHHHCSC-EEEECSSCHHHHHHHHHSBCCTTCTTSCCBCCGGGCCEEECHHHHC---------------
T ss_pred             ccccchhhHHHHHhhHHh-hhhhhhccchhhhhhhhhhhhhHHHHHHhcCCccccceeeeccccC---------------
Confidence            345678999999887665 456666655544333           34567888999988876433               


Q ss_pred             HHHhhhcccCCCCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHHcCC
Q 022360          165 FVESAASTTTSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGL  244 (298)
Q Consensus       165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a~~aG~  244 (298)
                                                              +||+|.+|..+++++|++|++|++|||+.+|+.+|+++|+
T Consensus       158 ----------------------------------------~KP~p~~f~~~~~~lg~~p~e~l~VgD~~~Dv~~A~~aG~  197 (225)
T d2g80a1         158 ----------------------------------------KKTETQSYANILRDIGAKASEVLFLSDNPLELDAAAGVGI  197 (225)
T ss_dssp             ----------------------------------------CTTCHHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHTTTC
T ss_pred             ----------------------------------------CCCChhHhHHHHHhcccCchhceeecCCHHHHHHHHHcCC
Confidence                                                    6999999999999999999999999999999999999999


Q ss_pred             eEEEecCCC----CCCCCCEEeCCHHHH
Q 022360          245 DTVLIGKSQ----RVKGADYAFESIHNI  268 (298)
Q Consensus       245 ~~v~v~~~~----~~~~ad~i~~s~~~l  268 (298)
                      .++++.++.    ....+..++.+++||
T Consensus       198 ~ti~v~r~g~~~~~~~~~~~~i~~~~eL  225 (225)
T d2g80a1         198 ATGLASRPGNAPVPDGQKYQVYKNFETL  225 (225)
T ss_dssp             EEEEECCTTSCCCCSSCCSCEESCSTTC
T ss_pred             EEEEEeCCCCCCCcccCCCCccCChhhC
Confidence            999996543    245566678888764

>d1cr6a1 c.108.1.2 (A:4-225) Epoxide hydrolase, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: YihX-like
domain: Epoxide hydrolase, N-terminal domain
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.80  E-value=1.3e-20  Score=159.96  Aligned_cols=103  Identities=17%  Similarity=0.213  Sum_probs=89.6

Q ss_pred             CCCCChhHHHHHHhCC---CcEEEEeCC----ChHHHHHHHHHhCCCCccceeEeecCCCCCCCCCCCCChhhHHHHHhh
Q 022360           97 NLKPDPVLRSLLLSLP---LRKIIFTNA----DKVHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSDDEDDIAFVESA  169 (298)
Q Consensus        97 ~~~~~~g~~~~L~~l~---~~~~ivS~~----~~~~~~~~l~~l~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~  169 (298)
                      ...++|++.++|..|+   .+++++|+.    ........+...++.++||.++++++.+.                   
T Consensus        95 ~~~~~~~~~~~L~~L~~~~~~~~i~s~~~~~~~~~~~~~~~~~~~l~~~fd~i~~s~~~~~-------------------  155 (222)
T d1cr6a1          95 ARSINRPMLQAAIALKKKGFTTCIVTNNWLDDGDKRDSLAQMMCELSQHFDFLIESCQVGM-------------------  155 (222)
T ss_dssp             TCEECHHHHHHHHHHHHTTCEEEEEECCCCCCSSSHHHHHHHHHHHGGGCSEEEEHHHHSC-------------------
T ss_pred             cCCCCccHHHHHHHHHhcCCceEEeeccccccHHHHHHHHHHhcChHhhhceeeehhhccC-------------------
Confidence            3567899999999884   778899974    34455666778899999999999988775                   


Q ss_pred             hcccCCCCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHHcCCeEEEe
Q 022360          170 ASTTTSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTVLI  249 (298)
Q Consensus       170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a~~aG~~~v~v  249 (298)
                                                         +||+|++|..++++++++|++|+||||+.+||.+|+++|+.++++
T Consensus       156 -----------------------------------~KP~p~~~~~~~~~~~v~p~~~l~IgD~~~Di~~A~~aG~~ti~V  200 (222)
T d1cr6a1         156 -----------------------------------IKPEPQIYNFLLDTLKAKPNEVVFLDDFGSNLKPARDMGMVTILV  200 (222)
T ss_dssp             -----------------------------------CTTCHHHHHHHHHHHTSCTTSEEEEESSSTTTHHHHHHTCEEEEC
T ss_pred             -----------------------------------CCCChHHHHHHHHHhCCCcceEEEEECCHHHHHHHHHcCCEEEEE
Confidence                                               799999999999999999999999999999999999999999987


Q ss_pred             cCCC
Q 022360          250 GKSQ  253 (298)
Q Consensus       250 ~~~~  253 (298)
                      .++.
T Consensus       201 ~~~~  204 (222)
T d1cr6a1         201 HNTA  204 (222)
T ss_dssp             CSSS
T ss_pred             CCcc
Confidence            6544

>d1zd3a1 c.108.1.2 (A:2-224) Epoxide hydrolase, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: YihX-like
domain: Epoxide hydrolase, N-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.79  E-value=1.2e-19  Score=153.04  Aligned_cols=100  Identities=19%  Similarity=0.188  Sum_probs=85.4

Q ss_pred             CCCChhHHHHHHhCC---CcEEEEeCCChH----HHHHHHHHhCCCCccceeEeecCCCCCCCCCCCCChhhHHHHHhhh
Q 022360           98 LKPDPVLRSLLLSLP---LRKIIFTNADKV----HAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSDDEDDIAFVESAA  170 (298)
Q Consensus        98 ~~~~~g~~~~L~~l~---~~~~ivS~~~~~----~~~~~l~~l~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~  170 (298)
                      ..++|++.++|..|+   ++++++||....    .........++.++|+.++++++.+.                    
T Consensus        98 ~~~~~~~~~~l~~L~~~~~~~~i~Tn~~~~~~~~~~~~~~~~~~~~~~fd~i~~s~~~~~--------------------  157 (225)
T d1zd3a1          98 RKINRPMLQAALMLRKKGFTTAILTNTWLDDRAERDGLAQLMCELKMHFDFLIESCQVGM--------------------  157 (225)
T ss_dssp             CEECHHHHHHHHHHHHTTCEEEEEECCCCCCSTTHHHHHHHHHHHHTTSSEEEEHHHHTC--------------------
T ss_pred             CCCCccHHHHHHHHHhccCccccccccchhhHHHHHHHHhhhcChHhhccEEEecccccc--------------------
Confidence            567899999988874   789999986544    33344455678899999999988776                    


Q ss_pred             cccCCCCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHHcCCeEEEec
Q 022360          171 STTTSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTVLIG  250 (298)
Q Consensus       171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a~~aG~~~v~v~  250 (298)
                                                        +||+|++|+++++++|++|++|++|||+.+|+.+|+++|+.++++.
T Consensus       158 ----------------------------------~KP~~~~~~~~~~~~~~~p~e~l~VgD~~~Di~~A~~~G~~ti~v~  203 (225)
T d1zd3a1         158 ----------------------------------VKPEPQIYKFLLDTLKASPSEVVFLDDIGANLKPARDLGMVTILVQ  203 (225)
T ss_dssp             ----------------------------------CTTCHHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHHTTCEEEECS
T ss_pred             ----------------------------------chhHHHHHHHHhhhcccCccceeEEecCHHHHHHHHHcCCEEEEEC
Confidence                                              7999999999999999999999999999999999999999999775


Q ss_pred             C
Q 022360          251 K  251 (298)
Q Consensus       251 ~  251 (298)
                      +
T Consensus       204 ~  204 (225)
T d1zd3a1         204 D  204 (225)
T ss_dssp             S
T ss_pred             C
Confidence            4

>d1u7pa_ c.108.1.17 (A:) Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Magnesium-dependent phosphatase-1, Mdp1
domain: Magnesium-dependent phosphatase-1, Mdp1
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.76  E-value=4.3e-19  Score=145.73  Aligned_cols=99  Identities=18%  Similarity=0.228  Sum_probs=86.2

Q ss_pred             CCCCCChhHHHHHHhCC---CcEEEEeCCCh-HHHHHHHHHhCCCCccceeEeecCCCCCCCCCCCCChhhHHHHHhhhc
Q 022360           96 ENLKPDPVLRSLLLSLP---LRKIIFTNADK-VHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSDDEDDIAFVESAAS  171 (298)
Q Consensus        96 ~~~~~~~g~~~~L~~l~---~~~~ivS~~~~-~~~~~~l~~l~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  171 (298)
                      ..+.++||+.++|+.|+   ++++|+|++.. ...+..++++++..+|+.+...                          
T Consensus        43 ~~~~l~pgv~e~L~~L~~~G~~~~v~S~~~~~~~~~~~l~~~~~~~~~~~~~~~--------------------------   96 (164)
T d1u7pa_          43 QNIQLYPEVPEVLGRLQSLGVPVAAASRTSEIQGANQLLELFDLGKYFIQREIY--------------------------   96 (164)
T ss_dssp             CEECCCTTHHHHHHHHHHTTCCEEEEECCSCHHHHHHHHHHTTCGGGCSEEEES--------------------------
T ss_pred             cccccchHHHHHHHHHHHCCCcEEEEeccccchhhccchhcccccccceeeecc--------------------------
Confidence            34688999999999884   78999998765 4566778999998888877643                          


Q ss_pred             ccCCCCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHHcCCeEEEecC
Q 022360          172 TTTSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTVLIGK  251 (298)
Q Consensus       172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a~~aG~~~v~v~~  251 (298)
                                                       .||+|..+..+++++|++|++|++|||+..|+++|+++|+.++++.+
T Consensus        97 ---------------------------------~kp~~~~~~~~~~~~~~~~~~~l~igD~~~di~aA~~aG~~~i~v~~  143 (164)
T d1u7pa_          97 ---------------------------------PGSKVTHFERLHHKTGVPFSQMVFFDDENRNIIDVGRLGVTCIHIRD  143 (164)
T ss_dssp             ---------------------------------SSCHHHHHHHHHHHHCCCGGGEEEEESCHHHHHHHHTTTCEEEECSS
T ss_pred             ---------------------------------cCCChHHHHHHHHHhCCChHHEEEEcCCHHHHHHHHHcCCEEEEECC
Confidence                                             59999999999999999999999999999999999999999999987


Q ss_pred             CC
Q 022360          252 SQ  253 (298)
Q Consensus       252 ~~  253 (298)
                      |.
T Consensus       144 G~  145 (164)
T d1u7pa_         144 GM  145 (164)
T ss_dssp             CC
T ss_pred             CC
Confidence            64

>d2b0ca1 c.108.1.2 (A:8-204) Putative phosphatase YihX {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: YihX-like
domain: Putative phosphatase YihX
species: Escherichia coli [TaxId: 562]

Probab=99.76  E-value=2.3e-19  Score=147.68  Aligned_cols=102  Identities=20%  Similarity=0.410  Sum_probs=87.8

Q ss_pred             CCCChhHHHHHHhC---CCcEEEEeCCChHHHHHHHHHh-CCCCccceeEeecCCCCCCCCCCCCChhhHHHHHhhhccc
Q 022360           98 LKPDPVLRSLLLSL---PLRKIIFTNADKVHAVKVLSRL-GLEDCFEGIICFETLNPTHKNTVSDDEDDIAFVESAASTT  173 (298)
Q Consensus        98 ~~~~~g~~~~L~~l---~~~~~ivS~~~~~~~~~~l~~l-~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  173 (298)
                      ..+.+++.+++..+   +.+++++|++........+..+ ++..+|+.++++++.+.                       
T Consensus        83 ~~~~~~~~~l~~~l~~~~~~~~i~t~~~~~~~~~~~~~~~~l~~~fd~v~~s~~~~~-----------------------  139 (197)
T d2b0ca1          83 VALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEIRDAADHIYLSQDLGM-----------------------  139 (197)
T ss_dssp             EEECHHHHHHHHHHHHTTCEEEEEECCCCCTTSCCGGGCHHHHHHCSEEEEHHHHTC-----------------------
T ss_pred             cccCchhHHHHHHHHhcCCeEEEEeCccHHHHHHHHHHcccchhhccceeecccccc-----------------------
Confidence            46678888887766   4778899998777776666654 78899999999988775                       


Q ss_pred             CCCCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHHcCCeEEEecCCC
Q 022360          174 TSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTVLIGKSQ  253 (298)
Q Consensus       174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a~~aG~~~v~v~~~~  253 (298)
                                                     +||+|++++.+++++|++|++|++|||+.+|+++|+++|+.++++..+.
T Consensus       140 -------------------------------~Kp~~~~~~~~~~~~~~~~~~~l~vgDs~~di~~A~~aG~~ti~v~~~~  188 (197)
T d2b0ca1         140 -------------------------------RKPEARIYQHVLQAEGFSPSDTVFFDDNADNIEGANQLGITSILVKDKT  188 (197)
T ss_dssp             -------------------------------CTTCHHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHTTTCEEEECCSTT
T ss_pred             -------------------------------cccchHHHHHHHHhcCCCCCeEEEEeCCHHHHHHHHHcCCEEEEECCCC
Confidence                                           7999999999999999999999999999999999999999999886543

>d2feaa1 c.108.1.20 (A:2-227) 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: MtnX-like
domain: 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX
species: Bacillus subtilis [TaxId: 1423]

Probab=99.73  E-value=3.8e-18  Score=145.64  Aligned_cols=139  Identities=12%  Similarity=0.060  Sum_probs=99.9

Q ss_pred             CCCCChhHHHHHHhCC---CcEEEEeCCChHHHHHHHHHhCCCCccce-eEeecCCCCCCCCCCCCChhhHHHHHhhhcc
Q 022360           97 NLKPDPVLRSLLLSLP---LRKIIFTNADKVHAVKVLSRLGLEDCFEG-IICFETLNPTHKNTVSDDEDDIAFVESAAST  172 (298)
Q Consensus        97 ~~~~~~g~~~~L~~l~---~~~~ivS~~~~~~~~~~l~~l~l~~~f~~-i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  172 (298)
                      ..+++||+.++|+.|+   .+++++|++....++.+++++++..+|.. .+..++...                      
T Consensus        73 ~~~l~pg~~~~l~~L~~~g~~~~ivS~~~~~~i~~~l~~l~~~~~~~an~~~~~~~~~----------------------  130 (226)
T d2feaa1          73 DAKIREGFREFVAFINEHEIPFYVISGGMDFFVYPLLEGIVEKDRIYCNHASFDNDYI----------------------  130 (226)
T ss_dssp             HCCBCTTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHHTTTSCGGGEEEEEEECSSSBC----------------------
T ss_pred             ccchhHHHHHHHHHHHhcccccccCCcchhhhHHHHHHHcCCccceeeeeEEEeCCcc----------------------
Confidence            3578899999999884   78999999999999999999988766532 111111110                      


Q ss_pred             cCCCCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHHcCCeEEEecCC
Q 022360          173 TTSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTVLIGKS  252 (298)
Q Consensus       173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a~~aG~~~v~v~~~  252 (298)
                                  ...+..+        .....+++++..+..+++++++++++|+|||||.+|+.||++||+.++.....
T Consensus       131 ------------~~~~~~~--------~~~~~~~~k~~~~~~~~~~~~~~~~~~i~iGDs~~Dl~~a~~A~~~~a~~~~~  190 (226)
T d2feaa1         131 ------------HIDWPHS--------CKGTCSNQCGCCKPSVIHELSEPNQYIIMIGDSVTDVEAAKLSDLCFARDYLL  190 (226)
T ss_dssp             ------------EEECTTC--------CCTTCCSCCSSCHHHHHHHHCCTTCEEEEEECCGGGHHHHHTCSEEEECHHHH
T ss_pred             ------------eeccccc--------cccccccCCHHHHHHHHHHhcCCCceEEEEeCchhhHHHHHHCCEEEEecchH
Confidence                        0000000        00112678889999999999999999999999999999999999765432211


Q ss_pred             ---CCCCCCCEEeCCHHHHHHHhHHhhc
Q 022360          253 ---QRVKGADYAFESIHNIKEAIPELWE  277 (298)
Q Consensus       253 ---~~~~~ad~i~~s~~~l~~~l~~~~~  277 (298)
                         .....+...++++++|...|+++.+
T Consensus       191 ~~~~~~~~~~~~~~d~~~i~~~l~~~~~  218 (226)
T d2feaa1         191 NECREQNLNHLPYQDFYEIRKEIENVKE  218 (226)
T ss_dssp             HHHHHTTCCEECCSSHHHHHHHHHTSHH
T ss_pred             HHHHHcCCCeeecCCHHHHHHHHHHHHH
Confidence               1245566778999999998887754

>d1j97a_ c.108.1.4 (A:) Phosphoserine phosphatase {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Phosphoserine phosphatase
domain: Phosphoserine phosphatase
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=99.73  E-value=6e-18  Score=141.31  Aligned_cols=132  Identities=20%  Similarity=0.241  Sum_probs=99.2

Q ss_pred             CCCCChhHHHHHHhC---CCcEEEEeCCChHHHHHHHHHhCCCCccceeEeecCCCCCCCCCCCCChhhHHHHHhhhccc
Q 022360           97 NLKPDPVLRSLLLSL---PLRKIIFTNADKVHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSDDEDDIAFVESAASTT  173 (298)
Q Consensus        97 ~~~~~~g~~~~L~~l---~~~~~ivS~~~~~~~~~~l~~l~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  173 (298)
                      ...+.+++.+.+..+   +...+++|+.............+...++...+..++......                    
T Consensus        73 ~~~~~~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------  132 (210)
T d1j97a_          73 RITPTEGAEETIKELKNRGYVVAVVSGGFDIAVNKIKEKLGLDYAFANRLIVKDGKLTGD--------------------  132 (210)
T ss_dssp             TCCBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCSEEEEEEEEEETTEEEEE--------------------
T ss_pred             hhhhhhhHHHHHHHHHHcCCEEEeecccccccccchhhccchhhhhhhhhcccccccccc--------------------
Confidence            356778888887776   477889999999999999999998888777766654332000                    


Q ss_pred             CCCCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHHcCCeEEEecCCC
Q 022360          174 TSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTVLIGKSQ  253 (298)
Q Consensus       174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a~~aG~~~v~v~~~~  253 (298)
                                    ...      ..    ..+++++..+..++++++++++++++||||.||+.|++.+|+++++.+.+.
T Consensus       133 --------------~~~------~~----~~~~~~~~~~~~~~~~~~~~~~~~i~iGDs~nDi~m~~~ag~~va~na~~~  188 (210)
T d1j97a_         133 --------------VEG------EV----LKENAKGEILEKIAKIEGINLEDTVAVGDGANDISMFKKAGLKIAFCAKPI  188 (210)
T ss_dssp             --------------EEC------SS----CSTTHHHHHHHHHHHHHTCCGGGEEEEESSGGGHHHHHHCSEEEEESCCHH
T ss_pred             --------------ccc------cc----cccccccchhhhHHHHhcccccceEEecCCcChHHHHHHCCCCEEECCCHH
Confidence                          000      01    125788899999999999999999999999999999999999988733334


Q ss_pred             CCCCCCEEeCC--HHHHHHHh
Q 022360          254 RVKGADYAFES--IHNIKEAI  272 (298)
Q Consensus       254 ~~~~ad~i~~s--~~~l~~~l  272 (298)
                      .+..|++++++  +++|.++|
T Consensus       189 lk~~Ad~vi~~~d~~~vl~~l  209 (210)
T d1j97a_         189 LKEKADICIEKRDLREILKYI  209 (210)
T ss_dssp             HHTTCSEEECSSCGGGGGGGC
T ss_pred             HHHhCCEEEcCCCHHHHHHHh
Confidence            47889999985  44555544

>d2gmwa1 c.108.1.19 (A:24-205) D,D-heptose 1,7-bisphosphate phosphatase GmhB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Histidinol phosphatase-like
domain: D,D-heptose 1,7-bisphosphate phosphatase GmhB
species: Escherichia coli [TaxId: 562]

Probab=99.72  E-value=9.8e-18  Score=139.95  Aligned_cols=70  Identities=21%  Similarity=0.327  Sum_probs=62.5

Q ss_pred             CCCCHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHHcCCeE-EEecCCCC-----CCCCCEEeCCHHHHHHHhHH
Q 022360          205 CKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDT-VLIGKSQR-----VKGADYAFESIHNIKEAIPE  274 (298)
Q Consensus       205 ~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a~~aG~~~-v~v~~~~~-----~~~ad~i~~s~~~l~~~l~~  274 (298)
                      +||+|.++..++++++++|++++||||+.+|+++|+++|+.+ +++.++..     ...||++++++.||.++|++
T Consensus       107 rKP~p~m~~~~~~~~~i~~~~s~mVGDs~~Di~aA~~Ag~~~~~lv~~g~~~~~~~~~~ad~v~~~l~dl~~~ikk  182 (182)
T d2gmwa1         107 RKPHPGMLLSARDYLHIDMAASYMVGDKLEDMQAAVAANVGTKVLVRTGKPITPEAENAADWVLNSLADLPQAIKK  182 (182)
T ss_dssp             STTSCHHHHHHHHHHTBCGGGCEEEESSHHHHHHHHHTTCSEEEEESSSSCCCHHHHHHCSEEESCGGGHHHHHHC
T ss_pred             cCCccccccchhhhcccccccccccCCCHHHHHHHHHhCCCcEEEECCCCCCCcccccCCCEEECCHHHHHHHhcC
Confidence            799999999999999999999999999999999999999975 66666553     35699999999999998874

>d2c4na1 c.108.1.14 (A:1-250) NagD {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: NagD-like
domain: NagD
species: Escherichia coli [TaxId: 562]

Probab=99.69  E-value=2.5e-18  Score=150.13  Aligned_cols=65  Identities=26%  Similarity=0.397  Sum_probs=58.4

Q ss_pred             CCCCHHHHHHHHHHcCCCCCcEEEEcCCc-cchHHHHHcCCeEEEecCCCC--------CCCCCEEeCCHHHHH
Q 022360          205 CKPSELAIEKALKIASINPQRTLFFEDSV-RNIQAGKRVGLDTVLIGKSQR--------VKGADYAFESIHNIK  269 (298)
Q Consensus       205 ~kp~~~~~~~~l~~l~i~p~~~i~iGDs~-~Di~~a~~aG~~~v~v~~~~~--------~~~ad~i~~s~~~l~  269 (298)
                      +||+|.+++.+++++|++|++|+||||++ +||.+|+++|+.+++|.+|..        ...||++++|+.||.
T Consensus       175 ~KP~p~~~~~a~~~lgi~p~e~v~IGD~~~~DI~~a~~aG~~tilV~~G~~~~~~l~~~~~~pd~i~~sl~eL~  248 (250)
T d2c4na1         175 GKPSPWIIRAALNKMQAHSEETVIVGDNLRTDILAGFQAGLETILVLSGVSSLDDIDSMPFRPSWIYPSVAEID  248 (250)
T ss_dssp             STTSTHHHHHHHHHHTCCGGGEEEEESCTTTHHHHHHHTTCEEEEESSSSCCGGGGSSCSSCCSEEESSGGGCC
T ss_pred             ccchhhhHhhhhhhhcCCchheEEecCChHHHHHHHHHCCCCEEEECCCCCCHHHHHhCCCCCCEEECCHHHhC
Confidence            79999999999999999999999999997 699999999999999977642        345799999998863

>d1wvia_ c.108.1.14 (A:) Putative phosphatase SMU.1415c {Streptococcus mutans [TaxId: 1309]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: NagD-like
domain: Putative phosphatase SMU.1415c
species: Streptococcus mutans [TaxId: 1309]

Probab=99.67  E-value=1.3e-16  Score=139.27  Aligned_cols=64  Identities=20%  Similarity=0.358  Sum_probs=57.4

Q ss_pred             CCCCHHHHHHHHHHcCCCCCcEEEEcCCc-cchHHHHHcCCeEEEecCCCC--------CCCCCEEeCCHHHH
Q 022360          205 CKPSELAIEKALKIASINPQRTLFFEDSV-RNIQAGKRVGLDTVLIGKSQR--------VKGADYAFESIHNI  268 (298)
Q Consensus       205 ~kp~~~~~~~~l~~l~i~p~~~i~iGDs~-~Di~~a~~aG~~~v~v~~~~~--------~~~ad~i~~s~~~l  268 (298)
                      +||+|.+++.+++++|++|++|+||||+. +||.+|+++||.+++|.+|..        ...||++++|+.|+
T Consensus       179 gKP~p~~~~~al~~l~i~~~~~~mIGDs~~~DI~gA~~aG~~si~V~~G~~~~~~~~~~~~~PD~vi~sl~e~  251 (253)
T d1wvia_         179 GKPEAVIMNKALDRLGVKRHEAIMVGDNYLTDITAGIKNDIATLLVTTGFTKPEEVPALPIQPDFVLSSLAEW  251 (253)
T ss_dssp             STTSHHHHHHHHHHHTSCGGGEEEEESCTTTTHHHHHHTTCEEEEESSSSSCTTTGGGCSSCCSEEESCGGGC
T ss_pred             ccCCcccceehhhhccccccceEEEcCChHHHHHHHHHCCCCEEEECCCCCCHHHHhhcCCCCCEEECCHHHc
Confidence            69999999999999999999999999997 599999999999999976642        34579999999875

>d1vjra_ c.108.1.14 (A:) Hypothetical protein TM1742 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: NagD-like
domain: Hypothetical protein TM1742
species: Thermotoga maritima [TaxId: 2336]

Probab=99.66  E-value=2.4e-16  Score=137.80  Aligned_cols=69  Identities=17%  Similarity=0.407  Sum_probs=62.9

Q ss_pred             CCCCHHHHHHHHHHcCCCCCcEEEEcCCc-cchHHHHHcCCeEEEecCCCC--------CCCCCEEeCCHHHHHHHhH
Q 022360          205 CKPSELAIEKALKIASINPQRTLFFEDSV-RNIQAGKRVGLDTVLIGKSQR--------VKGADYAFESIHNIKEAIP  273 (298)
Q Consensus       205 ~kp~~~~~~~~l~~l~i~p~~~i~iGDs~-~Di~~a~~aG~~~v~v~~~~~--------~~~ad~i~~s~~~l~~~l~  273 (298)
                      +||+|..+..+++++|++|++|+||||+. +||.+|+++|+.+++|.+|..        ...||++++|+.||.++|+
T Consensus       184 ~KP~p~~~~~a~~~l~~~~~~~lmVGD~~~~DI~ga~~aG~~si~V~~G~~~~~~~~~~~~~PD~ii~~l~eL~~~l~  261 (261)
T d1vjra_         184 GKPNPLVVDVISEKFGVPKERMAMVGDRLYTDVKLGKNAGIVSILVLTGETTPEDLERAETKPDFVFKNLGELAKAVQ  261 (261)
T ss_dssp             STTSTHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHHHHTCEEEEESSSSCCHHHHHHCSSCCSEEESSHHHHHHHHC
T ss_pred             CCCcHHHHHHHHhhhccCchhcceecCChhHHHHHHHHCCCcEEEECCCCCCHHHHhhcCCCCCEEECCHHHHHHHhC
Confidence            69999999999999999999999999997 799999999999999977753        4468999999999998874

>d2o2xa1 c.108.1.19 (A:8-216) Hypothetical protein Mll2559 {Mesorhizobium loti [TaxId: 381]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Histidinol phosphatase-like
domain: Hypothetical protein Mll2559
species: Mesorhizobium loti [TaxId: 381]

Probab=99.65  E-value=2e-16  Score=135.08  Aligned_cols=71  Identities=23%  Similarity=0.349  Sum_probs=58.4

Q ss_pred             CCCCHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHHcCCeEEEecCCCCCCCCCEEeC---CHHHHHHHhHHh
Q 022360          205 CKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTVLIGKSQRVKGADYAFE---SIHNIKEAIPEL  275 (298)
Q Consensus       205 ~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a~~aG~~~v~v~~~~~~~~ad~i~~---s~~~l~~~l~~~  275 (298)
                      .||+|.++..+++++++++++|+||||+.+|+++|+++|+.++++..+.....+++.+.   ++.++.+.+..+
T Consensus       128 rKP~p~ml~~a~~~~~i~~~~~~~VGD~~~Di~aA~~AGi~~i~v~~g~~~~~~~~~~~~~~~~~e~~dll~~v  201 (209)
T d2o2xa1         128 RKPNPGMLVEAGKRLALDLQRSLIVGDKLADMQAGKRAGLAQGWLVDGEAAVQPGFAIRPLRDSSELGDLLAAI  201 (209)
T ss_dssp             STTSCHHHHHHHHHHTCCGGGCEEEESSHHHHHHHHHTTCSEEEEETCCCEEETTEEEEEESSHHHHHHHHHHH
T ss_pred             ccccchhhhHhHHHhCCCccceEEeCCCHHHHHHHHHCCCcEEEEeCCCCcccCCccccCccchhHHHHHHHHH
Confidence            69999999999999999999999999999999999999999999987776555555544   455555544433

>d1nnla_ c.108.1.4 (A:) Phosphoserine phosphatase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Phosphoserine phosphatase
domain: Phosphoserine phosphatase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.65  E-value=1.1e-16  Score=136.88  Aligned_cols=128  Identities=13%  Similarity=0.159  Sum_probs=88.1

Q ss_pred             CCCCChhHHHHHHhCC---CcEEEEeCCChHHHHHHHHHhCCCCc--cceeEeecCCCCCCCCCCCCChhhHHHHHhhhc
Q 022360           97 NLKPDPVLRSLLLSLP---LRKIIFTNADKVHAVKVLSRLGLEDC--FEGIICFETLNPTHKNTVSDDEDDIAFVESAAS  171 (298)
Q Consensus        97 ~~~~~~g~~~~L~~l~---~~~~ivS~~~~~~~~~~l~~l~l~~~--f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  171 (298)
                      ...++||+.+++++|+   .+++|+|++....++++++.+|++.+  +..-+.....+.+.|                  
T Consensus        80 ~~~l~pg~~~~i~~lk~~G~~~~ivS~~~~~~v~~i~~~lgi~~~~v~an~~~~~~~G~~~g------------------  141 (217)
T d1nnla_          80 PPHLTPGIRELVSRLQERNVQVFLISGGFRSIVEHVASKLNIPATNVFANRLKFYFNGEYAG------------------  141 (217)
T ss_dssp             CCCBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCCGGGEEEECEEECTTSCEEE------------------
T ss_pred             ccccCHHHHHHHHHHHhCCCEEEEECCCchHHHHHHHHHhCCcccceeeeeeeeeehhcccc------------------
Confidence            3567899999998874   88999999999999999999999743  211111121111100                  


Q ss_pred             ccCCCCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHHcCCeEEEecC
Q 022360          172 TTTSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTVLIGK  251 (298)
Q Consensus       172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a~~aG~~~v~v~~  251 (298)
                                      +..+++-        ..+..|...++.+.+++  ++++|++||||.||+.|++.+|+++++.+.
T Consensus       142 ----------------~~~~~p~--------~~~~~K~~~v~~~~~~~--~~~~~~~vGDs~~Di~~~~~ag~~va~~~~  195 (217)
T d1nnla_         142 ----------------FDETQPT--------AESGGKGKVIKLLKEKF--HFKKIIMIGDGATDMEACPPADAFIGFGGN  195 (217)
T ss_dssp             ----------------ECTTSGG--------GSTTHHHHHHHHHHHHH--CCSCEEEEESSHHHHTTTTTSSEEEEECSS
T ss_pred             ----------------ceeeeee--------eccchHHHHHHHHHhcc--CccccEEEEeCHhhHHHHHhCCceEEECCC
Confidence                            0000000        01355667788776655  468899999999999999999998766544


Q ss_pred             CCC---CCCCCEEeCCHHHH
Q 022360          252 SQR---VKGADYAFESIHNI  268 (298)
Q Consensus       252 ~~~---~~~ad~i~~s~~~l  268 (298)
                      ...   +..+++++.|+.+|
T Consensus       196 ~~~~~~~~~ad~~i~~f~el  215 (217)
T d1nnla_         196 VIRQQVKDNAKWYITDFVEL  215 (217)
T ss_dssp             CCCHHHHHHCSEEESCGGGG
T ss_pred             HHHHHHHHhCCCEeCCHHHh
Confidence            332   45689999998876

>d1yv9a1 c.108.1.14 (A:4-256) Putative hydrolase EF1188 {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: NagD-like
domain: Putative hydrolase EF1188
species: Enterococcus faecalis [TaxId: 1351]

Probab=99.64  E-value=1.3e-16  Score=139.09  Aligned_cols=64  Identities=20%  Similarity=0.424  Sum_probs=57.5

Q ss_pred             CCCCHHHHHHHHHHcCCCCCcEEEEcCCc-cchHHHHHcCCeEEEecCCC--------CCCCCCEEeCCHHHH
Q 022360          205 CKPSELAIEKALKIASINPQRTLFFEDSV-RNIQAGKRVGLDTVLIGKSQ--------RVKGADYAFESIHNI  268 (298)
Q Consensus       205 ~kp~~~~~~~~l~~l~i~p~~~i~iGDs~-~Di~~a~~aG~~~v~v~~~~--------~~~~ad~i~~s~~~l  268 (298)
                      +||+|.++.++++++|++|++|+||||+. +||++|+++|+.+++|.+|.        ....||++++|+.|+
T Consensus       179 ~KP~~~~~~~~~~~~gi~~~~~l~IGD~~~~DI~~a~~aG~~si~V~~G~~~~~~~~~~~~~Pd~vi~sl~e~  251 (253)
T d1yv9a1         179 GKPKAIIMERAIAHLGVEKEQVIMVGDNYETDIQSGIQNGIDSLLVTSGFTPKSAVPTLPTPPTYVVDSLDEW  251 (253)
T ss_dssp             STTSHHHHHHHHHHHCSCGGGEEEEESCTTTHHHHHHHHTCEEEEETTSSSCSSSTTTCSSCCSEEESSGGGC
T ss_pred             cccchhHHHHHHHHhCCCccceEEecCChHHHHHHHHHCCCCEEEECCCCCCHHHHHhcCCCCCEEECCHHHc
Confidence            79999999999999999999999999997 69999999999999996653        245579999999875

>d2fpwa1 c.108.1.19 (A:3-163) Histidine biosynthesis bifunctional protein HisB, phosphatase domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Histidinol phosphatase-like
domain: Histidine biosynthesis bifunctional protein HisB, phosphatase domain
species: Escherichia coli [TaxId: 562]

Probab=99.64  E-value=1.6e-17  Score=136.36  Aligned_cols=49  Identities=16%  Similarity=0.316  Sum_probs=42.6

Q ss_pred             CCCCHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHHcCCeEEEecCCC
Q 022360          205 CKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTVLIGKSQ  253 (298)
Q Consensus       205 ~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a~~aG~~~v~v~~~~  253 (298)
                      +||+|.++..+++++|++|++|+||||+.+|+++|+++|+.+++++.+.
T Consensus       103 ~KP~p~~~~~~~~~~~id~~~~~~IGD~~~Di~aA~~aG~~~i~i~~~~  151 (161)
T d2fpwa1         103 RKPKVKLVERYLAEQAMDRANSYVIGDRATDIQLAENMGINGLRYDRET  151 (161)
T ss_dssp             STTSSGGGGGGC----CCGGGCEEEESSHHHHHHHHHHTSEEEECBTTT
T ss_pred             cccccHHHHHHHHhcCCChhcEEEECCCHHHHHHHHHcCCeEEEECCCC
Confidence            6999999999999999999999999999999999999999999986654

>d1rkua_ c.108.1.11 (A:) Homoserine kinase ThrH {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Homoserine kinase ThrH
domain: Homoserine kinase ThrH
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.56  E-value=2.2e-15  Score=125.20  Aligned_cols=128  Identities=9%  Similarity=0.042  Sum_probs=93.3

Q ss_pred             CCCChhHHHHHHhC--CCcEEEEeCCChHHHHHHHHHhCCCCccceeEeecCCCCCCCCCCCCChhhHHHHHhhhcccCC
Q 022360           98 LKPDPVLRSLLLSL--PLRKIIFTNADKVHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSDDEDDIAFVESAASTTTS  175 (298)
Q Consensus        98 ~~~~~g~~~~L~~l--~~~~~ivS~~~~~~~~~~l~~l~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  175 (298)
                      ....++....+..+  +.+.+++|++...........++...++...+........                        
T Consensus        68 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~------------------------  123 (206)
T d1rkua_          68 LKPLEGAVEFVDWLRERFQVVILSDTFYEFSQPLMRQLGFPTLLCHKLEIDDSDRV------------------------  123 (206)
T ss_dssp             CCCCTTHHHHHHHHHTTSEEEEEEEEEHHHHHHHHHHTTCCCEEEEEEEECTTSCE------------------------
T ss_pred             ccccchHHHHHHHhhcCceEEEeccCchHHHHHHHHHhCCchhhcceeeeeccccc------------------------
Confidence            45556666665544  4778899999999999999999887766555544332210                        


Q ss_pred             CCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHHcCCeEEEecCCCC-
Q 022360          176 ANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTVLIGKSQR-  254 (298)
Q Consensus       176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a~~aG~~~v~v~~~~~-  254 (298)
                                            .+    ...+++......++++++++++|++||||.||++|++.||++++| +.+.. 
T Consensus       124 ----------------------~~----~~~~~~~~~~~~~~~~~i~~~eviaiGDg~NDi~Ml~~Ag~gIAm-na~~~v  176 (206)
T d1rkua_         124 ----------------------VG----YQLRQKDPKRQSVIAFKSLYYRVIAAGDSYNDTTMLSEAHAGILF-HAPENV  176 (206)
T ss_dssp             ----------------------EE----EECCSSSHHHHHHHHHHHTTCEEEEEECSSTTHHHHHHSSEEEEE-SCCHHH
T ss_pred             ----------------------cc----ccccchhhHHHHHHHhcccccceEEecCCccCHHHHHhCCccEEE-CCCHHH
Confidence                                  00    024444567888899999999999999999999999999999998 44432 


Q ss_pred             -CCCCCEE-eCCHHHHHHHhHHhh
Q 022360          255 -VKGADYA-FESIHNIKEAIPELW  276 (298)
Q Consensus       255 -~~~ad~i-~~s~~~l~~~l~~~~  276 (298)
                       +..++++ ..+.++|.+.|.+.-
T Consensus       177 ~~~~~~~~~~~~~~d~~~~~~~~~  200 (206)
T d1rkua_         177 IREFPQFPAVHTYEDLKREFLKAS  200 (206)
T ss_dssp             HHHCTTSCEECSHHHHHHHHHHHC
T ss_pred             HHhCCCceeecCHHHHHHHHHHHh
Confidence             5667875 577888988877764

>d1wr8a_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Phosphoglycolate phosphatase, PGPase
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=99.48  E-value=3.4e-14  Score=119.97  Aligned_cols=72  Identities=24%  Similarity=0.218  Sum_probs=60.5

Q ss_pred             CCCCHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHHcCCeEEEecCC-CCCCCCCEEeCCHH--HHHHHhHHhh
Q 022360          205 CKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTVLIGKS-QRVKGADYAFESIH--NIKEAIPELW  276 (298)
Q Consensus       205 ~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a~~aG~~~v~v~~~-~~~~~ad~i~~s~~--~l~~~l~~~~  276 (298)
                      +.+|+.+++.+++++|++++++++|||+.||+.|++.+|+++++.+.. ..+..|++++.+.+  .+.++|.+++
T Consensus       150 ~~~K~~al~~l~~~~~i~~~~~~~iGD~~NDi~ml~~ag~~vav~na~~~~k~~A~~v~~~~~~~gv~~~i~~~l  224 (230)
T d1wr8a_         150 WINKGSGIEKASEFLGIKPKEVAHVGDGENDLDAFKVVGYKVAVAQAPKILKENADYVTKKEYGEGGAEAIYHIL  224 (230)
T ss_dssp             TCCHHHHHHHHHHHHTSCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHTTCSEECSSCHHHHHHHHHHHHH
T ss_pred             CcCcchhhcccccccccchhheeeeecCccHHHHHHHCCeEEEECCCCHHHHHhCCEEECCCCcCHHHHHHHHHH
Confidence            588899999999999999999999999999999999999887764333 34788999998754  3777777665

>d1qyia_ c.108.1.13 (A:) Hypothetical protein MW1667 (SA1546) {Staphylococcus aureus [TaxId: 1280]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Hypothetical protein MW1667 (SA1546)
domain: Hypothetical protein MW1667 (SA1546)
species: Staphylococcus aureus [TaxId: 1280]

Probab=99.46  E-value=4.4e-14  Score=130.63  Aligned_cols=137  Identities=20%  Similarity=0.269  Sum_probs=105.4

Q ss_pred             CCCChhHHHHHHhCC---CcEEEEeCCChHHHHHHHHHhCCCCccce--eEeecCCCCCCCCCCCCChhhHHHHHhhhcc
Q 022360           98 LKPDPVLRSLLLSLP---LRKIIFTNADKVHAVKVLSRLGLEDCFEG--IICFETLNPTHKNTVSDDEDDIAFVESAAST  172 (298)
Q Consensus        98 ~~~~~g~~~~L~~l~---~~~~ivS~~~~~~~~~~l~~l~l~~~f~~--i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  172 (298)
                      +.|.|++.++|+.|+   ++++++|+.....++..++++|+.++|+.  +++.++...            ...       
T Consensus       214 i~p~~~v~~~l~~lk~aGi~v~i~Tg~~~~~a~~il~~lgl~~~F~~~~i~~~~d~~~------------~~~-------  274 (380)
T d1qyia_         214 LRPVDEVKVLLNDLKGAGFELGIATGRPYTETVVPFENLGLLPYFEADFIATASDVLE------------AEN-------  274 (380)
T ss_dssp             SSCHHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCGGGSCGGGEECHHHHHH------------HHH-------
T ss_pred             ccchhhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCcccCCcceEEecchhhh------------hhh-------
Confidence            346779998888774   88999999999999999999999999976  333332100            000       


Q ss_pred             cCCCCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHH--------------cCCCCCcEEEEcCCccchHH
Q 022360          173 TTSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKI--------------ASINPQRTLFFEDSVRNIQA  238 (298)
Q Consensus       173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~--------------l~i~p~~~i~iGDs~~Di~~  238 (298)
                                              ..+.....+||+|..+..++..              ++.+|++|+||||+.||+.+
T Consensus       275 ------------------------~~~~~~~~~KP~p~~~~~~~~~~~~~~~~k~~iv~~~~~~~~~~~~vGD~~~D~~a  330 (380)
T d1qyia_         275 ------------------------MYPQARPLGKPNPFSYIAALYGNNRDKYESYINKQDNIVNKDDVFIVGDSLADLLS  330 (380)
T ss_dssp             ------------------------HSTTSCCCCTTSTHHHHHHHHCCCGGGHHHHHHCCTTCSCTTTEEEEESSHHHHHH
T ss_pred             ------------------------hccccccccCCChHHHHHHHHHcCCCHHHHHHHHHHhCCCCCeEEEECCCHHHHHH
Confidence                                    0000011279999999888754              45778999999999999999


Q ss_pred             HHHcCCeEEEecCCCC---------CCCCCEEeCCHHHHHHHhHHhhc
Q 022360          239 GKRVGLDTVLIGKSQR---------VKGADYAFESIHNIKEAIPELWE  277 (298)
Q Consensus       239 a~~aG~~~v~v~~~~~---------~~~ad~i~~s~~~l~~~l~~~~~  277 (298)
                      |+++|+.++++.+|..         ..+||++++|+.+|.++|..++.
T Consensus       331 ak~Ag~~~Igv~~G~~g~~~~~el~~~~AD~ii~~~~el~~il~~l~~  378 (380)
T d1qyia_         331 AQKIGATFIGTLTGLKGKDAAGELEAHHADYVINHLGELRGVLDNLLE  378 (380)
T ss_dssp             HHHHTCEEEEESCBTTBGGGHHHHHHTTCSEEESSGGGHHHHHSCTTT
T ss_pred             HHHCCCCEEEEecCCCCcccHHHHHhCCCCEEECCHHHHHHHHHHHHh
Confidence            9999999999977642         34799999999999999987764

>d1nrwa_ c.108.1.10 (A:) Hypothetical protein YwpJ {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Hypothetical protein YwpJ
species: Bacillus subtilis [TaxId: 1423]

Probab=99.39  E-value=8.3e-14  Score=121.95  Aligned_cols=72  Identities=14%  Similarity=0.057  Sum_probs=61.6

Q ss_pred             CCCCHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHHcCCeEEEecCC-CCCCCCCEEeCCHHH--HHHHhHHhh
Q 022360          205 CKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTVLIGKS-QRVKGADYAFESIHN--IKEAIPELW  276 (298)
Q Consensus       205 ~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a~~aG~~~v~v~~~-~~~~~ad~i~~s~~~--l~~~l~~~~  276 (298)
                      +-.|..+++++++++|++++++++|||+.||+.|++.+|.++++.+.. ..+..|++++.+.++  +.++|++++
T Consensus       211 ~~~K~~ai~~l~~~~gi~~~~vi~~GD~~ND~~Ml~~a~~svam~na~~~~k~~A~~v~~~~~~~Gv~~~l~~ll  285 (285)
T d1nrwa_         211 KASKGQALKRLAKQLNIPLEETAAVGDSLNDKSMLEAAGKGVAMGNAREDIKSIADAVTLTNDEHGVAHMMKHLL  285 (285)
T ss_dssp             TCSHHHHHHHHHHHTTCCGGGEEEEESSGGGHHHHHHSSEEEECTTCCHHHHHHCSEECCCGGGTHHHHHHHHTC
T ss_pred             cchhhhHHHHHHhhcccCcccEEEEeCCHHHHHHHHhCCeEEEeCCCCHHHHHhCCEEcCCCCccHHHHHHHHhC
Confidence            367889999999999999999999999999999999999888876543 347889999998664  888887764

>d1rlma_ c.108.1.10 (A:) Sugar phosphatase SupH (YbiV) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Sugar phosphatase SupH (YbiV)
species: Escherichia coli [TaxId: 562]

Probab=99.39  E-value=9.9e-14  Score=120.72  Aligned_cols=75  Identities=16%  Similarity=0.127  Sum_probs=65.3

Q ss_pred             CCCCHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHHcCCeEEEecCCC-CCCCCCEEeCCHHH--HHHHhHHhhccC
Q 022360          205 CKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTVLIGKSQ-RVKGADYAFESIHN--IKEAIPELWESD  279 (298)
Q Consensus       205 ~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a~~aG~~~v~v~~~~-~~~~ad~i~~s~~~--l~~~l~~~~~~~  279 (298)
                      +-.|..+++.+++++|++++++++|||+.||+.|++.+|.++++.+..+ .+..|++++.+.++  +.+.|++++...
T Consensus       188 ~~sK~~al~~l~~~lgi~~~~vi~~GD~~ND~~Ml~~ag~~vam~Na~~~lk~~A~~v~~~~~~~Gva~~i~~~l~~~  265 (269)
T d1rlma_         188 GLHKANGISRLLKRWDLSPQNVVAIGDSGNDAEMLKMARYSFAMGNAAENIKQIARYATDDNNHEGALNVIQAVLDNT  265 (269)
T ss_dssp             TCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHCSEEEECTTCCHHHHHHCSEECCCGGGTHHHHHHHHHHHTC
T ss_pred             chHHHHHHHHHhhhhccccccEEEEcCCcchHHHHHhCCeEEEeCCCCHHHHHhCCEEcCCCCccHHHHHHHHHHhcC
Confidence            3678899999999999999999999999999999999999999765443 47889999998776  899999988644

>d1l6ra_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Phosphoglycolate phosphatase, PGPase
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=99.37  E-value=3.3e-14  Score=121.05  Aligned_cols=71  Identities=11%  Similarity=0.088  Sum_probs=58.1

Q ss_pred             CCCCHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHHcCCeEEEecC-CCCCCCCCEEeCCH--HHHHHHhHHh
Q 022360          205 CKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTVLIGK-SQRVKGADYAFESI--HNIKEAIPEL  275 (298)
Q Consensus       205 ~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a~~aG~~~v~v~~-~~~~~~ad~i~~s~--~~l~~~l~~~  275 (298)
                      +..|..+++.+++++|+++++|++|||+.||+.|++.+|.++++.+. +..+..|++++++.  +.+.++|++.
T Consensus       149 ~~~K~~ai~~l~~~~~i~~~~v~~~GDs~nD~~m~~~a~~~vav~na~~~~k~~ad~v~~~~~~~gi~~~l~~~  222 (225)
T d1l6ra_         149 GEDKAFAVNKLKEMYSLEYDEILVIGDSNNDMPMFQLPVRKACPANATDNIKAVSDFVSDYSYGEEIGQIFKHF  222 (225)
T ss_dssp             TCSHHHHHHHHHHHTTCCGGGEEEECCSGGGHHHHTSSSEEEECTTSCHHHHHHCSEECSCCTTHHHHHHHHHT
T ss_pred             ccchHHHHHHHhhhhccchhheeeecCCcchHHHHHHCCeEEEECCCcHHHHHhCCEEECCCCcCHHHHHHHHh
Confidence            46678999999999999999999999999999999999987776433 33477899998765  4577777654

>d1rkqa_ c.108.1.10 (A:) Hypothetical protein YidA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Hypothetical protein YidA
species: Escherichia coli [TaxId: 562]

Probab=99.35  E-value=9.2e-14  Score=120.94  Aligned_cols=72  Identities=13%  Similarity=0.124  Sum_probs=60.5

Q ss_pred             CCCCHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHHcCCeEEEecCC-CCCCCCCEEeCCHHH--HHHHhHHhh
Q 022360          205 CKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTVLIGKS-QRVKGADYAFESIHN--IKEAIPELW  276 (298)
Q Consensus       205 ~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a~~aG~~~v~v~~~-~~~~~ad~i~~s~~~--l~~~l~~~~  276 (298)
                      +-.|..+++.++++++++++++++|||+.||+.|++.+|.++++.+.. ..+..|++++.+..+  +.++|++++
T Consensus       195 ~~~K~~al~~l~~~~~i~~~~ii~~GD~~ND~~ml~~~~~~~am~na~~~lk~~a~~i~~~~~~~Gv~~~l~~~~  269 (271)
T d1rkqa_         195 RVNKGTGVKSLADVLGIKPEEIMAIGDQENDIAMIEYAGVGVAVDNAIPSVKEVANFVTKSNLEDGVAFAIEKYV  269 (271)
T ss_dssp             TCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHHHCSEECCCTTTTHHHHHHHHHT
T ss_pred             CCCcccccceehhhcccchhcEEEEeCcHhHHHHHHhCCcEEEeCCCCHHHHHhCCEEcCCCCcChHHHHHHHHh
Confidence            356789999999999999999999999999999999999888776433 347888999988765  777777653

>d1ltqa1 c.108.1.9 (A:153-301) Polynucleotide kinase, phosphatase domain {Bacteriophage T4 [TaxId: 10665]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: phosphatase domain of polynucleotide kinase
domain: Polynucleotide kinase, phosphatase domain
species: Bacteriophage T4 [TaxId: 10665]

Probab=99.32  E-value=7.3e-13  Score=105.42  Aligned_cols=48  Identities=10%  Similarity=0.190  Sum_probs=40.8

Q ss_pred             CCCCHHHHHHHHHHcCCCCCc-EEEEcCCccchHHHHHcCCeEEEecCC
Q 022360          205 CKPSELAIEKALKIASINPQR-TLFFEDSVRNIQAGKRVGLDTVLIGKS  252 (298)
Q Consensus       205 ~kp~~~~~~~~l~~l~i~p~~-~i~iGDs~~Di~~a~~aG~~~v~v~~~  252 (298)
                      .+|+......++.++..++.+ +++|||+..|++||+++|+.++.|.+|
T Consensus        99 ~~~d~~~k~~~l~~~~~~~~~i~~~igD~~~dv~a~~~~Gi~~~~V~~G  147 (149)
T d1ltqa1          99 TRKDDVVKEEIFWKHIAPHFDVKLAIDDRTQVVEMWRRIGVECWQVASG  147 (149)
T ss_dssp             CSCHHHHHHHHHHHHTTTTCEEEEEEECCHHHHHHHHHTTCCEEECSCC
T ss_pred             cCCchHHHHHHHHHhccCCCceEEEEcCCHHHHHHHHHCCCcEEEeCCC
Confidence            467778888888888776666 567899999999999999999999876

>d1nf2a_ c.108.1.10 (A:) Hypothetical protein TM0651 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Hypothetical protein TM0651
species: Thermotoga maritima [TaxId: 2336]

Probab=99.30  E-value=8.1e-14  Score=121.66  Aligned_cols=74  Identities=8%  Similarity=0.070  Sum_probs=63.9

Q ss_pred             CCCCHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHHcCCeEEEecCCC-CCCCCCEEeCCHHH--HHHHhHHhhcc
Q 022360          205 CKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTVLIGKSQ-RVKGADYAFESIHN--IKEAIPELWES  278 (298)
Q Consensus       205 ~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a~~aG~~~v~v~~~~-~~~~ad~i~~s~~~--l~~~l~~~~~~  278 (298)
                      +-.|..+++.++++++++++++++|||+.||+.|++.+|.++++.+... .+..|++++.+.++  +.++|++++..
T Consensus       188 ~~~K~~ai~~l~~~~~i~~~~vva~GD~~ND~~ml~~~~~sva~~na~~~~k~~A~~i~~~~~~~Gva~~i~~ll~~  264 (267)
T d1nf2a_         188 NVDKGKALRFLRERMNWKKEEIVVFGDNENDLFMFEEAGLRVAMENAIEKVKEASDIVTLTNNDSGVSYVLERISTD  264 (267)
T ss_dssp             TCCHHHHHHHHHHHHTCCGGGEEEEECSHHHHHHHTTCSEEEECTTSCHHHHHHCSEECCCTTTTHHHHHHTTBCBS
T ss_pred             CCchhHHHHHHHHhhccCcccEEEEcCCcchHHHHHhCCcEEEeCCCCHHHHHhCCEEcCCCCccHHHHHHHHHHhc
Confidence            4678899999999999999999999999999999999998877654433 48889999998776  88999888753

>d2b30a1 c.108.1.10 (A:18-300) PFL1270w orthologue {Plasmodium vivax [TaxId: 5855]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: PFL1270w orthologue
species: Plasmodium vivax [TaxId: 5855]

Probab=99.27  E-value=6.2e-13  Score=115.70  Aligned_cols=73  Identities=12%  Similarity=0.132  Sum_probs=60.8

Q ss_pred             CCCCHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHHcCCeEEEecC-CCCCCCCCEEeCCHHH---HHHHhHHhhc
Q 022360          205 CKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTVLIGK-SQRVKGADYAFESIHN---IKEAIPELWE  277 (298)
Q Consensus       205 ~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a~~aG~~~v~v~~-~~~~~~ad~i~~s~~~---l~~~l~~~~~  277 (298)
                      +..|..++..++++++++++++++|||+.||+.|++.+|.++++.+. +..+..|++++.+-++   +.++|++++.
T Consensus       205 ~~~K~~~l~~l~~~~~i~~~~vi~~GD~~ND~~Ml~~a~~~va~~na~~~~k~~a~~v~~~~~~~g~v~~~l~~~~~  281 (283)
T d2b30a1         205 GHDKYTGINYLLKHYNISNDQVLVVGDAENDIAMLSNFKYSFAVANATDSAKSHAKCVLPVSHREGAVAYLLKKVFD  281 (283)
T ss_dssp             TCCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHSCSEEEECTTCCHHHHHHSSEECSSCTTTTHHHHHHHHHHT
T ss_pred             cchhHHHHHHHhhhcccccceEEEecCChhhHHHHHhCCcEEEeCCCCHHHHHhCCEEECCcCCCcHHHHHHHHHHc
Confidence            47788999999999999999999999999999999999988776533 3347888999975332   7888888764

>d2rbka1 c.108.1.10 (A:2-261) Sugar-phosphate phosphatase BT4131 {Bacteroides thetaiotaomicron [TaxId: 818]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Sugar-phosphate phosphatase BT4131
species: Bacteroides thetaiotaomicron [TaxId: 818]

Probab=99.23  E-value=6.8e-12  Score=108.73  Aligned_cols=71  Identities=17%  Similarity=0.264  Sum_probs=60.0

Q ss_pred             CCCCHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHHcCCeEEEecC-CCCCCCCCEEeCCHHH--HHHHhHHh
Q 022360          205 CKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTVLIGK-SQRVKGADYAFESIHN--IKEAIPEL  275 (298)
Q Consensus       205 ~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a~~aG~~~v~v~~-~~~~~~ad~i~~s~~~--l~~~l~~~  275 (298)
                      +-+|..+++.+++++|++++++++|||+.||+.|.+.+|..+++.+. +..+..|++++.+.++  +.++|++.
T Consensus       184 ~~sK~~al~~l~~~~~i~~~~~~a~GD~~ND~~Ml~~a~~svav~na~~~lk~~A~~vt~~~~~~Gv~~~l~~~  257 (260)
T d2rbka1         184 GDTKQKGIDEIIRHFGIKLEETMSFGDGGNDISMLRHAAIGVAMGQAKEDVKAAADYVTAPIDEDGISKAMKHF  257 (260)
T ss_dssp             TCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHHHSSEECCCGGGTHHHHHHHHH
T ss_pred             CCCHHHHHHHHHHhccccHhheeEecCCcccHHHHHhCCeEEEeCCCCHHHHHhCCEEeCCCCccHHHHHHHHh
Confidence            47788999999999999999999999999999999999998766543 3347888999998655  77777664

>d1k1ea_ c.108.1.5 (A:) Probable phosphatase YrbI {Haemophilus influenzae, HI1679 [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Probable phosphatase YrbI
domain: Probable phosphatase YrbI
species: Haemophilus influenzae, HI1679 [TaxId: 727]

Probab=99.19  E-value=4.9e-12  Score=104.60  Aligned_cols=111  Identities=14%  Similarity=0.157  Sum_probs=89.0

Q ss_pred             HHHHHhCCCcEEEEeCCChHHHHHHHHHhCCCCccceeEeecCCCCCCCCCCCCChhhHHHHHhhhcccCCCCCCchhhh
Q 022360          105 RSLLLSLPLRKIIFTNADKVHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSDDEDDIAFVESAASTTTSANGPQIFDI  184 (298)
Q Consensus       105 ~~~L~~l~~~~~ivS~~~~~~~~~~l~~l~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  184 (298)
                      ...|+..++.++++|+.....+....+.+++...+    ..                                       
T Consensus        41 i~~l~~~gi~~~iis~~~~~~v~~~~~~l~~~~~~----~~---------------------------------------   77 (177)
T d1k1ea_          41 IKMLMDADIQVAVLSGRDSPILRRRIADLGIKLFF----LG---------------------------------------   77 (177)
T ss_dssp             HHHHHHTTCEEEEEESCCCHHHHHHHHHHTCCEEE----ES---------------------------------------
T ss_pred             HHHHhhhcEEEEEecCCchhHHHHHHhhhcccccc----cc---------------------------------------
Confidence            46677888999999999999899988888875322    11                                       


Q ss_pred             ccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHHcCCeEEEecC-CCCCCCCCEEeC
Q 022360          185 IGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTVLIGK-SQRVKGADYAFE  263 (298)
Q Consensus       185 ~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a~~aG~~~v~v~~-~~~~~~ad~i~~  263 (298)
                                          .+++...++.+++++++++++|+||||+.||+.+.+.+|+++++.+. ...+..|++++.
T Consensus        78 --------------------~~~K~~~l~~~~~~~~i~~~~v~~vGDd~nDl~~l~~~g~siap~nA~~~vk~~A~~Vt~  137 (177)
T d1k1ea_          78 --------------------KLEKETACFDLMKQAGVTAEQTAYIGDDSVDLPAFAACGTSFAVADAPIYVKNAVDHVLS  137 (177)
T ss_dssp             --------------------CSCHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHTTSSEECS
T ss_pred             --------------------cccHHHHHHHHHHHhcCCcceeEEecCCccHHHHHhhCCeEEEcCCccHHHHHhCCEEeC
Confidence                                46777899999999999999999999999999999999998887744 345899999998


Q ss_pred             CHH---HHHHHhHHhhcc
Q 022360          264 SIH---NIKEAIPELWES  278 (298)
Q Consensus       264 s~~---~l~~~l~~~~~~  278 (298)
                      +-.   .+.++++.|+..
T Consensus       138 ~~GG~GavrE~~e~il~~  155 (177)
T d1k1ea_         138 THGGKGAFREMSDMILQA  155 (177)
T ss_dssp             SCTTTTHHHHHHHHHHHH
T ss_pred             CCCCCchHHHHHHHHHHH
Confidence            833   256666555543

>d1wzca1 c.108.1.10 (A:1-243) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP)
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=99.09  E-value=2.4e-10  Score=96.60  Aligned_cols=66  Identities=14%  Similarity=0.039  Sum_probs=52.5

Q ss_pred             CCCCHHHHHHHHHHcC-CCCCcEEEEcCCccchHHHHHcCCeEEEecCCCCCCCCCEEeCCHHHHHHHhH
Q 022360          205 CKPSELAIEKALKIAS-INPQRTLFFEDSVRNIQAGKRVGLDTVLIGKSQRVKGADYAFESIHNIKEAIP  273 (298)
Q Consensus       205 ~kp~~~~~~~~l~~l~-i~p~~~i~iGDs~~Di~~a~~aG~~~v~v~~~~~~~~ad~i~~s~~~l~~~l~  273 (298)
                      +-.|..++..++++++ +.++++++|||+.||++|++.+|.++++.+...   .....++++.|+.+.|+
T Consensus       177 ~~~K~~al~~l~~~~~~~~~~~~~a~GD~~ND~~Ml~~a~~~va~~Na~~---~~~~~~~~i~~~~~~i~  243 (243)
T d1wzca1         177 NSDKGKAAKILLDFYKRLGQIESYAVGDSYNDFPMFEVVDKVFIVGSLKH---KKAQNVSSIIDVLEVIK  243 (243)
T ss_dssp             SCCHHHHHHHHHHHHHTTSCEEEEEEECSGGGHHHHTTSSEEEEESSCCC---TTCEEESCHHHHHHHHT
T ss_pred             hhccHHHHHHHHHHhcCCCcccEEEEcCCHhHHHHHHcCCcEEEeCCCCh---HHHhhhhHHHHHHHhhC
Confidence            4677899999999994 889999999999999999999998888754432   23345777777777653

>d1u02a_ c.108.1.15 (A:) Trehalose-6-phosphate phosphatase related protein {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Trehalose-phosphatase
domain: Trehalose-6-phosphate phosphatase related protein
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=98.91  E-value=1.7e-09  Score=90.20  Aligned_cols=65  Identities=8%  Similarity=0.016  Sum_probs=52.3

Q ss_pred             CCCCHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHHcCCeEEEecCCCCCCCCCEEeCCHHHHHHHhHHh
Q 022360          205 CKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTVLIGKSQRVKGADYAFESIHNIKEAIPEL  275 (298)
Q Consensus       205 ~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a~~aG~~~v~v~~~~~~~~ad~i~~s~~~l~~~l~~~  275 (298)
                      +-.|..+++.+++     .+++++|||+.||+.|++.+|.+.++ ..+..+..|++.+.+.+|+.++|+.|
T Consensus       157 g~~Kg~al~~l~~-----~~~~i~~GDs~ND~~Mf~~~~~~~av-~~g~~~~~A~~~~~~~~ev~~~l~~l  221 (229)
T d1u02a_         157 GVNKGSAIRSVRG-----ERPAIIAGDDATDEAAFEANDDALTI-KVGEGETHAKFHVADYIEMRKILKFI  221 (229)
T ss_dssp             TCCHHHHHHHHHT-----TSCEEEEESSHHHHHHHHTTTTSEEE-EESSSCCCCSEEESSHHHHHHHHHHH
T ss_pred             CCCHHHHHHHHhc-----cccceeecCCCChHHHHhccCCeEEE-EeCCCCccCeEEcCCHHHHHHHHHHH
Confidence            3677888888875     36899999999999999999876543 33444678999999999998888776

>d2bdua1 c.108.1.21 (A:7-297) Cytosolic 5'-nucleotidase III {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Pyrimidine 5'-nucleotidase (UMPH-1)
domain: Cytosolic 5'-nucleotidase III
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.83  E-value=3.3e-09  Score=93.84  Aligned_cols=54  Identities=11%  Similarity=0.121  Sum_probs=43.1

Q ss_pred             CCChhhHHHHhhcccCCCCCCCChhHHHHHHhCC---CcEEEEeCCChHHHHHHHHHhCCC
Q 022360           79 DFDYDDYHSFVHGRLPYENLKPDPVLRSLLLSLP---LRKIIFTNADKVHAVKVLSRLGLE  136 (298)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~L~~l~---~~~~ivS~~~~~~~~~~l~~l~l~  136 (298)
                      .++.+.+.+.+.+    ..+.+.||+.+++..|+   ++++|+|++....++++++++++.
T Consensus       119 ~l~~~~i~~~v~~----~~i~Lr~G~~e~~~~l~~~~i~~~IvSgG~~~~ie~vl~~lg~~  175 (291)
T d2bdua1         119 GIPKAKLKEIVAD----SDVMLKEGYENFFGKLQQHGIPVFIFSAGIGDVLEEVIRQAGVY  175 (291)
T ss_dssp             CCBGGGHHHHHHH----SCCCBCBTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHHHHTTCC
T ss_pred             CCCHHHHHHHHHh----cCCCcccCHHHHHHHHHHcCCeEEEEcCChHHHHHHHHHHcCCC
Confidence            3345556655553    34678899999999884   889999999999999999999875

>d1xvia_ c.108.1.10 (A:) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP)
species: Escherichia coli [TaxId: 562]

Probab=98.77  E-value=1.2e-09  Score=91.27  Aligned_cols=44  Identities=11%  Similarity=0.012  Sum_probs=36.8

Q ss_pred             CCCCHHHHHHHHH---HcCCCCCcEEEEcCCccchHHHHHcCCeEEE
Q 022360          205 CKPSELAIEKALK---IASINPQRTLFFEDSVRNIQAGKRVGLDTVL  248 (298)
Q Consensus       205 ~kp~~~~~~~~l~---~l~i~p~~~i~iGDs~~Di~~a~~aG~~~v~  248 (298)
                      +..|..+++.+++   ++|++++++++|||+.||+.|++.+|.++++
T Consensus       182 ~~~K~~~~~~l~~~~~~l~i~~~~~iafGD~~NDl~Ml~~a~~~vaV  228 (232)
T d1xvia_         182 SAGKDQAANWIIATYQQLSGKRPTTLGLGDGPNDAPLLEVMDYAVIV  228 (232)
T ss_dssp             TCCHHHHHHHHHHHHHHHHSSCCEEEEEESSGGGHHHHHTSSEEEEC
T ss_pred             CchHHHHHHHHHHHHHHcCCChhcEEEEcCCHhHHHHHHhCCeEEEE
Confidence            4666777777765   5799999999999999999999999986653

>d1s2oa1 c.108.1.10 (A:1-244) Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc 6803 [TaxId: 1148]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Sucrose-phosphatase Slr0953
species: Synechocystis sp. pcc 6803 [TaxId: 1148]

Probab=98.77  E-value=8.7e-09  Score=87.56  Aligned_cols=47  Identities=15%  Similarity=0.090  Sum_probs=42.2

Q ss_pred             CCCCHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHHcCCeEEEecC
Q 022360          205 CKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTVLIGK  251 (298)
Q Consensus       205 ~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a~~aG~~~v~v~~  251 (298)
                      +..|..+++.+++++|++++++++|||+.||+.|++.+|.++++.+.
T Consensus       160 ~~~K~~a~~~l~~~~gi~~~~~v~~GD~~ND~~Ml~~~~~~vav~na  206 (244)
T d1s2oa1         160 RSNKGNATQYLQQHLAMEPSQTLVCGDSGNDIGLFETSARGVIVRNA  206 (244)
T ss_dssp             TCSHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHTSSSEEEECTTC
T ss_pred             ccchhHHHHHHHHhccCChhhEEEEcCCCCCHHHHhhCCcEEEeCCC
Confidence            46788999999999999999999999999999999999987776543

>d1yj5a1 c.108.1.9 (A:144-338) 5' polynucleotide kinase-3' phosphatase, middle domain {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: phosphatase domain of polynucleotide kinase
domain: 5' polynucleotide kinase-3' phosphatase, middle domain
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.65  E-value=5.1e-08  Score=81.02  Aligned_cols=44  Identities=20%  Similarity=0.220  Sum_probs=39.7

Q ss_pred             CCCCCHHHHHHHHHHcC----CCCCcEEEEcCC-----------------ccchHHHHHcCCeEE
Q 022360          204 ACKPSELAIEKALKIAS----INPQRTLFFEDS-----------------VRNIQAGKRVGLDTV  247 (298)
Q Consensus       204 ~~kp~~~~~~~~l~~l~----i~p~~~i~iGDs-----------------~~Di~~a~~aG~~~v  247 (298)
                      ++||++-++..++++++    ++.++++||||.                 ..|++.|.++|+...
T Consensus       114 ~RKP~~GM~~~~~~~~n~~~~id~~~S~~IGD~~gr~~~~~~~~~~~D~S~sD~~fA~N~gikF~  178 (195)
T d1yj5a1         114 NRKPVSGMWDHLQEQANEGIPISVEDSVFVGDAAGRLANWAPGRKKKDFSCADRLFALNVGLPFA  178 (195)
T ss_dssp             SSTTSTHHHHHHHHTSSSSCCCCGGGCEEECSCCCBCTTSBTTBCSCCSCCHHHHHHHHHTCCEE
T ss_pred             cCCCccHHHHHHHHHhcccccCCcCceEEEeCccCccccccccccccCcchhHHHHHHHCCCccc
Confidence            38999999999999986    888999999994                 489999999999975

>d2fuea1 c.108.1.10 (A:13-256) Phosphomannomutase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Phosphomannomutase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.59  E-value=4.2e-08  Score=81.64  Aligned_cols=42  Identities=5%  Similarity=-0.051  Sum_probs=34.1

Q ss_pred             CCCCHHHHHHHHHHcCCCCCcEEEEcCCc----cchHHHHHcCCeEEEe
Q 022360          205 CKPSELAIEKALKIASINPQRTLFFEDSV----RNIQAGKRVGLDTVLI  249 (298)
Q Consensus       205 ~kp~~~~~~~~l~~l~i~p~~~i~iGDs~----~Di~~a~~aG~~~v~v  249 (298)
                      +-.|..+++.+++   .+++++++|||+.    ||++|.+.+|...+.+
T Consensus       183 ~vsKg~al~~L~~---~~~~ev~afGD~~~~G~ND~eml~~a~~~~~av  228 (244)
T d2fuea1         183 GWDKRYCLDSLDQ---DSFDTIHFFGNETSPGGNDFEIFADPRTVGHSV  228 (244)
T ss_dssp             TCSTTHHHHHHTT---SCCSEEEEEESCCSTTSTTHHHHHSTTSEEEEC
T ss_pred             hccHHHHHHHHhc---CChhhEEEEcCCCCCCCCcHHHHHcCCCcEEEc
Confidence            3666788988875   5889999999975    9999999999766633

>d2amya1 c.108.1.10 (A:4-246) Phosphomannomutase 2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Phosphomannomutase 2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.45  E-value=7.3e-09  Score=86.70  Aligned_cols=54  Identities=7%  Similarity=-0.010  Sum_probs=40.1

Q ss_pred             CCCHHHHHHHHHHcCCCCCcEEEEcC----CccchHHHHHcCCeEEEecCCCCCCCCCEEeCCHHHHHHHhHHh
Q 022360          206 KPSELAIEKALKIASINPQRTLFFED----SVRNIQAGKRVGLDTVLIGKSQRVKGADYAFESIHNIKEAIPEL  275 (298)
Q Consensus       206 kp~~~~~~~~l~~l~i~p~~~i~iGD----s~~Di~~a~~aG~~~v~v~~~~~~~~ad~i~~s~~~l~~~l~~~  275 (298)
                      -.|..++++++   +++++++++|||    +.||++|++.+|..++             .+.+.+|..+.++.|
T Consensus       184 vsKg~al~~l~---~~~~~ev~afGD~~~~g~NDi~Ml~~~g~~~~-------------~v~~~~~~~~~~~~l  241 (243)
T d2amya1         184 WDKRYCLRHVE---NDGYKTIYFFGDKTMPGGNDHEIFTDPRTMGY-------------SVTAPEDTRRICELL  241 (243)
T ss_dssp             CSGGGGGGGTT---TSCCSEEEEEECSCC---CCCHHHHCTTEEEE-------------ECSSHHHHHHHHHHH
T ss_pred             cCHHHHHHHHh---CCCcceEEEEcCCCCCCCCcHHHHHccCCcEE-------------EeCCHHHHHHHHHHH
Confidence            55556777664   678999999999    5699999999997666             445567777766655

>d2b82a1 c.108.1.12 (A:4-212) Class B acid phosphatase, AphA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Class B acid phosphatase, AphA
domain: Class B acid phosphatase, AphA
species: Escherichia coli [TaxId: 562]

Probab=98.43  E-value=3.2e-07  Score=76.64  Aligned_cols=32  Identities=31%  Similarity=0.485  Sum_probs=27.9

Q ss_pred             HHHcCCCCCcEEEEcCCccchHHHHHcCCeEEEecC
Q 022360          216 LKIASINPQRTLFFEDSVRNIQAGKRVGLDTVLIGK  251 (298)
Q Consensus       216 l~~l~i~p~~~i~iGDs~~Di~~a~~aG~~~v~v~~  251 (298)
                      ++++++    ++++||+.+|+.+|+++|+..+.+-+
T Consensus       153 Ik~y~I----~l~~GD~l~Df~aA~eagi~~iRi~r  184 (209)
T d2b82a1         153 LQDKNI----RIFYGDSDNDITAARDVGARGIRILR  184 (209)
T ss_dssp             HHHTTE----EEEEESSHHHHHHHHHTTCEEEECCC
T ss_pred             HHHcCe----EEEecCCHHHHhHHHHcCCCceEeec
Confidence            356777    88999999999999999999998844

>d2b8ea1 c.108.1.7 (A:416-434,A:548-663) Cation-transporting ATPase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Meta-cation ATPase, catalytic domain P
domain: Cation-transporting ATPase
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=98.37  E-value=1.2e-06  Score=68.19  Aligned_cols=107  Identities=14%  Similarity=0.138  Sum_probs=71.9

Q ss_pred             CChhHHHH---HHhCCCcEEEEeCCChHHHHHHHHHhCCCCccceeEeecCCCCCCCCCCCCChhhHHHHHhhhcccCCC
Q 022360          100 PDPVLRSL---LLSLPLRKIIFTNADKVHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSDDEDDIAFVESAASTTTSA  176 (298)
Q Consensus       100 ~~~g~~~~---L~~l~~~~~ivS~~~~~~~~~~l~~l~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  176 (298)
                      +.|++.+.   |+.+++++.++|+........+.+.+|++.+|.                                    
T Consensus        22 lr~~a~~~I~~L~~~Gi~v~ilTGD~~~~a~~ia~~lgI~~v~~------------------------------------   65 (135)
T d2b8ea1          22 LKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLDLVIA------------------------------------   65 (135)
T ss_dssp             BCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCSEEEC------------------------------------
T ss_pred             CCccHHHHHHHHHHcCCEEEEEcCcchhhhhHHHhhhhhhhhcc------------------------------------
Confidence            34555555   455579999999999999999999999865431                                    


Q ss_pred             CCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHHcCCeEEEecCC-CCC
Q 022360          177 NGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTVLIGKS-QRV  255 (298)
Q Consensus       177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a~~aG~~~v~v~~~-~~~  255 (298)
                                                   .-.|+-...+++++.-. ..+.|+||+.||..+.+.++++.++.... ..+
T Consensus        66 -----------------------------~~~p~~k~~~v~~~q~~-~~v~~vGDg~nD~~aL~~Advgia~~~~~~~~~  115 (135)
T d2b8ea1          66 -----------------------------EVLPHQKSEEVKKLQAK-EVVAFVGDGINDAPALAQADLGIAVGSGSDVAV  115 (135)
T ss_dssp             -----------------------------SCCHHHHHHHHHHHTTT-SCEEEEECSSSSHHHHHHSSEEEEECCC-----
T ss_pred             -----------------------------ccchhHHHHHHHHHHcC-CEEEEEeCCCCcHHHHHhCCeeeecCccCHHHH
Confidence                                         11223344455555543 57999999999999999999988776433 358


Q ss_pred             CCCCEEeCC--HHHHHHHh
Q 022360          256 KGADYAFES--IHNIKEAI  272 (298)
Q Consensus       256 ~~ad~i~~s--~~~l~~~l  272 (298)
                      ..+|.++.+  +..|.+.|
T Consensus       116 ~aADivl~~~~l~~i~~aI  134 (135)
T d2b8ea1         116 ESGDIVLIRDDLRDVVAAI  134 (135)
T ss_dssp             ---SEEESSCCTHHHHHHH
T ss_pred             HhCCEEEECCCHHHHHHHh
Confidence            899999855  66665554

>d2bdea1 c.108.1.23 (A:2-459) Cytosolic IMP-GMP specific 5'-nucleotidase {Legionella pneumophila [TaxId: 446]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: 5' nucleotidase-like
domain: Cytosolic IMP-GMP specific 5'-nucleotidase
species: Legionella pneumophila [TaxId: 446]

Probab=98.19  E-value=9.4e-06  Score=74.98  Aligned_cols=125  Identities=14%  Similarity=0.106  Sum_probs=78.0

Q ss_pred             CCCChhHHHHHHhCC---CcEEEEeCCChHHHHHHHHHh---------CCCCccceeEeecCCCCCCCCCCCCChhhHHH
Q 022360           98 LKPDPVLRSLLLSLP---LRKIIFTNADKVHAVKVLSRL---------GLEDCFEGIICFETLNPTHKNTVSDDEDDIAF  165 (298)
Q Consensus        98 ~~~~~g~~~~L~~l~---~~~~ivS~~~~~~~~~~l~~l---------~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~  165 (298)
                      +...|.+..+|+.++   .++.++||++-.++...++.+         .+.++||.|++...-           ++   |
T Consensus       184 v~k~~~l~~~L~~lr~~GKklFLiTNS~~~y~~~~m~y~~~~~~~~g~dWr~lFDvVIv~A~K-----------P~---F  249 (458)
T d2bdea1         184 VIREKEVVEGLKHFIRYGKKIFILTNSEYSYSKLLLDYALSPFLDKGEHWQGLFEFVITLANK-----------PR---F  249 (458)
T ss_dssp             EECCHHHHHHHHHHHTTTCEEEEECSSCHHHHHHHHHHHHGGGSCTTCCGGGTEEEEEESCCH-----------HH---H
T ss_pred             hcCChhHHHHHHHHHHcCCeEEEEecCcHHHHHHHhhhhcccCCCCCCChHHhceEEEeCCCC-----------CC---c
Confidence            345788888888874   679999999999998888763         466799999985321           01   0


Q ss_pred             HHh----hhcccCCCCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCc-cchHHHH
Q 022360          166 VES----AASTTTSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSV-RNIQAGK  240 (298)
Q Consensus       166 ~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~p~~~i~iGDs~-~Di~~a~  240 (298)
                      ...    ..+.+..   ..+..    -..+.++=|+       .-.   ....+.+.+|+...+++||||+. .||...+
T Consensus       250 F~~~~~~~~v~~~~---g~l~~----~~~~~~~~vY-------~gG---n~~~l~~llg~~g~~VLY~GDhi~~Di~~~k  312 (458)
T d2bdea1         250 FYDNLRFLSVNPEN---GTMTN----VHGPIVPGVY-------QGG---NAKKFTEDLGVGGDEILYIGDHIYGDILRLK  312 (458)
T ss_dssp             HHSCCCEEEECTTT---CCEEE----CCSCCCSEEE-------EEC---CHHHHHHHTTCCGGGEEEEESSCCSCHHHHH
T ss_pred             cCCCCcceEEeCCC---Ccccc----CCccccCCcc-------ccC---CHHHHHHHhCCCCCcEEEECCccchhhhhhh
Confidence            000    0011000   00000    0011111111       122   25666677899999999999999 9987775


Q ss_pred             -HcCCeEEEecCCC
Q 022360          241 -RVGLDTVLIGKSQ  253 (298)
Q Consensus       241 -~aG~~~v~v~~~~  253 (298)
                       ..||.+++|-..-
T Consensus       313 k~~gWrT~~Ii~EL  326 (458)
T d2bdea1         313 KDCNWRTALVVEEL  326 (458)
T ss_dssp             HHHCSEEEEECTTH
T ss_pred             hhcCCceEEehHHH
Confidence             6799999986653

>d1q92a_ c.108.1.8 (A:) 5'(3')-deoxyribonucleotidase (dNT-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: 5'(3')-deoxyribonucleotidase (dNT-2)
domain: 5'(3')-deoxyribonucleotidase (dNT-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.00  E-value=1.5e-05  Score=65.12  Aligned_cols=44  Identities=14%  Similarity=0.082  Sum_probs=34.8

Q ss_pred             EEEcCCccchHHHHHcCCeEEEecCCCCCC----CCCEEeCCHHHHHH
Q 022360          227 LFFEDSVRNIQAGKRVGLDTVLIGKSQRVK----GADYAFESIHNIKE  270 (298)
Q Consensus       227 i~iGDs~~Di~~a~~aG~~~v~v~~~~~~~----~ad~i~~s~~~l~~  270 (298)
                      ++|.|+...+..+..+|+.+++...++.+.    ..-..+.+..|+.+
T Consensus       140 ~lIDD~p~n~~~~~~~g~~~il~~~~~N~~~~~~~~~~Rv~~W~e~~~  187 (195)
T d1q92a_         140 LLIDDRPDITGAEPTPSWEHVLFTACHNQHLQLQPPRRRLHSWADDWK  187 (195)
T ss_dssp             EEEESCSCCCCSCSSCSSEEEEECCTTTTTCCCCTTCEEECCTTSCHH
T ss_pred             EEecCcHHHHHHHhcCCCeEEEECCCcccCCCCCCCceeeCCHHHHHH
Confidence            799999999999999999999987776543    22457888888544

>d1wpga2 c.108.1.7 (A:344-360,A:600-750) Calcium ATPase, catalytic domain P {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Meta-cation ATPase, catalytic domain P
domain: Calcium ATPase, catalytic domain P
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=97.68  E-value=5.7e-05  Score=60.62  Aligned_cols=137  Identities=12%  Similarity=0.126  Sum_probs=83.8

Q ss_pred             CCChhHHHHHH---hCCCcEEEEeCCChHHHHHHHHHhCCCCc----cceeEeecCCCCCCCCCCCCChhhHHHHHhhhc
Q 022360           99 KPDPVLRSLLL---SLPLRKIIFTNADKVHAVKVLSRLGLEDC----FEGIICFETLNPTHKNTVSDDEDDIAFVESAAS  171 (298)
Q Consensus        99 ~~~~g~~~~L~---~l~~~~~ivS~~~~~~~~~~l~~l~l~~~----f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  171 (298)
                      +|.|++.+.++   ..++++.++|+........+.+.+|+...    .+..+...++..      ...++..+.+....+
T Consensus        20 p~R~~~~~~I~~l~~~GI~v~miTGD~~~tA~~ia~~~Gi~~~~~~v~~~~~~~~~~~~------~~~~~~~~~~~~~~v   93 (168)
T d1wpga2          20 PPRKEVMGSIQLCRDAGIRVIMITGDNKGTAIAICRRIGIFGENEEVADRAYTGREFDD------LPLAEQREACRRACC   93 (168)
T ss_dssp             CBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTSSCTTCCCTTTEEEHHHHHH------SCHHHHHHHHHHCCE
T ss_pred             CCchhHHHHHHHHHHCcCEEEEECCCCHHHHHHHHHHcCCCCCccccccccccccccch------hhHHHHhhhhhhhhh
Confidence            34566665555   45699999999999999999999998432    122222221110      000111111110000


Q ss_pred             ccCCCCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHHcCCeEEEecC
Q 022360          172 TTTSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTVLIGK  251 (298)
Q Consensus       172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a~~aG~~~v~v~~  251 (298)
                               +                       ..-.|+--..+.+.+.-....+.|+||+.||..+.+.+.++.++...
T Consensus        94 ---------~-----------------------ar~~p~~K~~lv~~l~~~g~~Va~vGDG~nD~~AL~~AdvGIa~~~g  141 (168)
T d1wpga2          94 ---------F-----------------------ARVEPSHKSKIVEYLQSYDEITAMTGDGVNDAPALKKAEIGIAMGSG  141 (168)
T ss_dssp             ---------E-----------------------ESCCHHHHHHHHHHHHHTTCCEEEEECSGGGHHHHHHSSEEEEETTS
T ss_pred             ---------h-----------------------hccchhHHHHHHHHHHhcccceeEEecCCCCHHHHHhCCEEEEeccc
Confidence                     0                       23344555555555555556799999999999999999988877532


Q ss_pred             CC-CCCCCCEEeCC--HHHHHHHhH
Q 022360          252 SQ-RVKGADYAFES--IHNIKEAIP  273 (298)
Q Consensus       252 ~~-~~~~ad~i~~s--~~~l~~~l~  273 (298)
                      .. .+..+|+++.+  +..+.++|+
T Consensus       142 t~~a~~aAdivl~~~~l~~v~~~I~  166 (168)
T d1wpga2         142 TAVAKTASEMVLADDNFSTIVAAVE  166 (168)
T ss_dssp             CHHHHHTCSEEETTCCTHHHHHHHH
T ss_pred             cHHHHHhCCEEEccCCHHHHHHHHH
Confidence            22 46789998876  777777664

>d1y8aa1 c.108.1.24 (A:1-308) Hypothetical protein AF1437 {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: AF1437-like
domain: Hypothetical protein AF1437
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=97.06  E-value=0.0027  Score=53.25  Aligned_cols=150  Identities=12%  Similarity=0.106  Sum_probs=87.0

Q ss_pred             CCCCChhHHHHHHhCC--CcEEEEeCCChHHHHHHHHHhCCCCccceeEeecCCCCCCCCCCCCChhhH-HHHHhhhccc
Q 022360           97 NLKPDPVLRSLLLSLP--LRKIIFTNADKVHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSDDEDDI-AFVESAASTT  173 (298)
Q Consensus        97 ~~~~~~g~~~~L~~l~--~~~~ivS~~~~~~~~~~l~~l~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~  173 (298)
                      .+...||+.+.|+.++  -+-+|+|.+-.++++.+.++.|..  +. +++.+ +..   .++.-.++.. +.+....+..
T Consensus        79 ~~~lvpgA~~~lk~l~~~m~~yIvSTSY~qyi~al~~~~gfp--~e-~~~T~-~~l---D~~~~p~ee~e~ll~i~~~~~  151 (308)
T d1y8aa1          79 SAKFVPDAEKAMATLQERWTPVVISTSYTQYLRRTASMIGVR--GE-LHGTE-VDF---DSIAVPEGLREELLSIIDVIA  151 (308)
T ss_dssp             HCCBCTTHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCC--SE-EEEEB-CCG---GGCCCCHHHHHHHHHHHHHHH
T ss_pred             ceeecCCHHHHHHHHHhhCCcEEEeccHHHHHHHHHhhcCCC--ce-eeccc-ccc---cccCCChHHHHHHHHHhhhcc
Confidence            3678899999999997  568899999999999999999984  33 33332 111   0011111211 1111110000


Q ss_pred             CCC--CC----------CchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHH
Q 022360          174 TSA--NG----------PQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKR  241 (298)
Q Consensus       174 ~~~--~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a~~  241 (298)
                      ...  +.          .++..|..--..+            .+-.|..+.+-+++..++++.  ++||||.+|+++.+.
T Consensus       152 d~~~eel~e~~d~~f~~~e~~~i~e~Vk~V------------Ggg~k~~i~~~~~~~~~~~~~--~~VGDSITDve~Lr~  217 (308)
T d1y8aa1         152 SLSGEELFRKLDELFSRSEVRKIVESVKAV------------GAGEKAKIMRGYCESKGIDFP--VVVGDSISDYKMFEA  217 (308)
T ss_dssp             HCCHHHHHHHHHHHHHSHHHHHHHHTCBCC------------CHHHHHHHHHHHHHHHTCSSC--EEEECSGGGHHHHHH
T ss_pred             CccHHHHHHHHHHHhccchHhhHHhhhccc------------CCchhHHHHHhhcccccCCcc--eeccCccccHHHHHH
Confidence            000  00          1111111100000            023455677888888899774  999999999999887


Q ss_pred             c----CCeEEEecCCCCCCCCCEEeCCHHH
Q 022360          242 V----GLDTVLIGKSQRVKGADYAFESIHN  267 (298)
Q Consensus       242 a----G~~~v~v~~~~~~~~ad~i~~s~~~  267 (298)
                      +    |+...+-+.-+....|+..+-|.+.
T Consensus       218 ~r~~gGlaIsFNGN~Yal~eA~VaiiS~~~  247 (308)
T d1y8aa1         218 ARGLGGVAIAFNGNEYALKHADVVIISPTA  247 (308)
T ss_dssp             HHHTTCEEEEESCCHHHHTTCSEEEECSST
T ss_pred             HhcCCCeeEEecCccccccccceEEeccch
Confidence            6    4444444555567788887766554

>d1xpja_ c.108.1.18 (A:) Hypothetical protein VC0232 {Vibrio cholerae [TaxId: 666]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Hypothetical protein VC0232
domain: Hypothetical protein VC0232
species: Vibrio cholerae [TaxId: 666]

Probab=95.51  E-value=0.022  Score=42.62  Aligned_cols=46  Identities=13%  Similarity=0.111  Sum_probs=32.6

Q ss_pred             CCCChhHHHHHHhC---CCcEEEEeCCCh---------------HHHHHHHHHhCCCCccceeEee
Q 022360           98 LKPDPVLRSLLLSL---PLRKIIFTNADK---------------VHAVKVLSRLGLEDCFEGIICF  145 (298)
Q Consensus        98 ~~~~~g~~~~L~~l---~~~~~ivS~~~~---------------~~~~~~l~~l~l~~~f~~i~~~  145 (298)
                      ..|.+++.+.|..|   +.++++.|+...               ..+...|+..|+ + ++.++.+
T Consensus        23 ~~P~~~~Ie~l~~l~~~G~~Iii~TaR~~~~~~~~~~~~~~~~~~~T~~wL~~~gI-~-Yd~Li~g   86 (124)
T d1xpja_          23 VLPRLDVIEQLREYHQLGFEIVISTARNMRTYEGNVGKINIHTLPIITEWLDKHQV-P-YDEILVG   86 (124)
T ss_dssp             CCBCHHHHHHHHHHHHTTCEEEEEECTTTTTTTTCHHHHHHHTHHHHHHHHHHTTC-C-CSEEEEC
T ss_pred             cCcCHHHHHHHHHHHHCCCEEEEEecCCccccCCcHHHHHHHHHHHHHHHHHHcCC-C-ceEEEEC
Confidence            46788888888887   577889998632               345667788888 3 4666654

>d1ta0a_ c.108.1.16 (A:) Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1, NRAMP1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: NLI interacting factor-like phosphatase
domain: Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1, NRAMP1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.67  E-value=0.015  Score=46.33  Aligned_cols=50  Identities=18%  Similarity=0.176  Sum_probs=42.7

Q ss_pred             CCCChhHHHHHHhCC--CcEEEEeCCChHHHHHHHHHhCCCCccceeEeecC
Q 022360           98 LKPDPVLRSLLLSLP--LRKIIFTNADKVHAVKVLSRLGLEDCFEGIICFET  147 (298)
Q Consensus        98 ~~~~~g~~~~L~~l~--~~~~ivS~~~~~~~~~~l~~l~l~~~f~~i~~~~~  147 (298)
                      +...||+.++|+.+.  +.++|.|.+...+++.+++.+.-...|...+..+.
T Consensus        54 v~~RP~l~eFL~~l~~~yei~I~Ta~~~~YA~~il~~ldp~~~~~~~~~r~~  105 (181)
T d1ta0a_          54 VLKRPHVDEFLQRMGELFECVLFTASLAKYADPVADLLDKWGAFRARLFRES  105 (181)
T ss_dssp             EEECTTHHHHHHHHHHHSEEEEECSSCHHHHHHHHHHHCSSCCEEEEECGGG
T ss_pred             EecCCCHHHHHHHHHhceEEEEEcCCcHHHHHHHHHHhccCCceeEEEEeee
Confidence            466899999999985  78999999999999999999988777777665543

>d1qyia_ c.108.1.13 (A:) Hypothetical protein MW1667 (SA1546) {Staphylococcus aureus [TaxId: 1280]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Hypothetical protein MW1667 (SA1546)
domain: Hypothetical protein MW1667 (SA1546)
species: Staphylococcus aureus [TaxId: 1280]

Probab=81.22  E-value=0.26  Score=43.21  Aligned_cols=20  Identities=20%  Similarity=0.351  Sum_probs=16.0

Q ss_pred             ccEEEEeCCCCccCCCccHH
Q 022360           14 YDCLLFDLDDTLYPYSSGIA   33 (298)
Q Consensus        14 ~k~viFDlDGTL~d~~~~~~   33 (298)
                      +|.|+|||||+|++....+-
T Consensus         1 ~~~i~fd~dGVll~~~~~~D   20 (380)
T d1qyia_           1 MKKILFDVDGVFLSEERCFD   20 (380)
T ss_dssp             CCEEEECSBTTTBCSHHHHH
T ss_pred             CceEEEeCCcEEEcceeecc
Confidence            47999999999999655443

>d2obba1 c.108.1.25 (A:1-122) Hypothetical protein BT0820 {Bacteroides thetaiotaomicron [TaxId: 818]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: BT0820-like
domain: Hypothetical protein BT0820
species: Bacteroides thetaiotaomicron [TaxId: 818]

Probab=81.09  E-value=0.27  Score=36.12  Aligned_cols=33  Identities=15%  Similarity=0.116  Sum_probs=22.8

Q ss_pred             CCChhHHHHHHhC---CCcEEEEeCCChHHHHHHHH
Q 022360           99 KPDPVLRSLLLSL---PLRKIIFTNADKVHAVKVLS  131 (298)
Q Consensus        99 ~~~~g~~~~L~~l---~~~~~ivS~~~~~~~~~~l~  131 (298)
                      .|.|++.+.|+.|   +..+++.|+..........+
T Consensus        21 kPi~~~Ie~l~~L~~~G~~IIi~TaR~~~~~~~t~~   56 (122)
T d2obba1          21 EEIPFAVETLKLLQQEKHRLILWSVREGELLDEAIE   56 (122)
T ss_dssp             CBCTTHHHHHHHHHHTTCEEEECCSCCHHHHHHHHH
T ss_pred             cccHHHHHHHHHHHHCCCeEEEEecCCCcchHHHHH
Confidence            4677888888877   36688888877665544333