Citrus Sinensis ID: 022364

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------30
MSDLKLRPEISFAQTFLCSAFAACFAELCTIPLDTAKVRLQLQKKTASGDGVSVSKYRGLMGTVVTIAREEGLWALWNGVIAGLHRQCIYGGLRIGLYDPVKTFLVGSDFVGDIPLYQKIFAALLTGAIAIVVANPTDLVKVRLQAEGKLPSGVPRRYYGALDAYCTIVRQEGLGALWTGLGPNIARNAIVNAAELASYDQVKETILKIPGFTDNIFTHILAGLGAGLFAVCIGSPIDVVGFLSPLLLSAKNNSLAAPNISISLYRLTTKVCCLLLLKKQPAYVRNYEECAYLILISL
cccccccccccHHHHHHHHHHHHHHHHHccccHHHHHHHHHHcccccccccccccccccHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHccccEEEHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHccHHHHHHHHHccccccccccccccccHHHHHHHHHHHHcHHHHHcccHHHHHHHHHHHHccHHcHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHcccHHHHHcccccccccccccccccHHHHHHHHHHHHHcccccccccccccccccccHHHHHHHc
cccccccccccHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHcccccccccccHHHcHHHHHHHHHHHHccHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHcccccccccHcccHHHHHHHHHHHcccHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHccccccccccHHHHHHHHHHHHHcccHHHHccccHHHHHcccccEEEEEEcc
msdlklrpeisFAQTFLCSAFAACFAELCTIPLDTAKVRLQLQKktasgdgvsvskyrgLMGTVVTIAREEGLWALWNGVIAGLHRQCIYgglriglydpvktflvgsdfvgdiPLYQKIFAALLTGAIAIVVANPTDLVKVRLQAegklpsgvprryygalDAYCTIVRQEGLGalwtglgpniaRNAIVNAAELASYDQVKETIlkipgftdnIFTHILAGLGAGLFAVCIGSPIDVVGFLSPLLLsaknnslaapnisiSLYRLTTKVCCLLLLKKQPAYVRNYEECAYLILISL
MSDLKLRPEISFAQTFLCSAFAACFAELCTIPLDTAKVRLQLqkktasgdgvsvskyrGLMGTVVTIAREEGLWALWNGVIAGLHRQCIYGGLRIGLYDPVKTFLVGSDFVGDIPLYQKIFAALLTGAIAIVVANPTDLVKVRLQaegklpsgvprryYGALDAYCTIVRQEGLGALWTGLGPNIARNAIVNAAELASYDQVKETILKIPGFTDNIFTHILAGLGAGLFAVCIGSPIDVVGFLSPLLLSAKNNSLAAPNISISLYRLTTKVCCLLLLkkqpayvrnYEECAYLILISL
MSDLKLRPEISFAQTFLCSAFAACFAELCTIPLDTAKVRLQLQKKTASGDGVSVSKYRGLMGTVVTIAREEGLWALWNGVIAGLHRQCIYGGLRIGLYDPVKTFLVGSDFVGDIPLYQKIFAALLTGAIAIVVANPTDLVKVRLQAEGKLPSGVPRRYYGALDAYCTIVRQEGLGALWTGLGPNIARNAIVNAAELASYDQVKETILKIPGFTDNIFTHILAGLGAGLFAVCIGSPIDVVGFlsplllsaknnslaapnISISLYRlttkvccllllkkQPAYVRNYEECAYLILISL
********EISFAQTFLCSAFAACFAELCTIPLDTAKVRLQLQKKTASGDGVSVSKYRGLMGTVVTIAREEGLWALWNGVIAGLHRQCIYGGLRIGLYDPVKTFLVGSDFVGDIPLYQKIFAALLTGAIAIVVANPTDLVKVRLQAEGKLPSGVPRRYYGALDAYCTIVRQEGLGALWTGLGPNIARNAIVNAAELASYDQVKETILKIPGFTDNIFTHILAGLGAGLFAVCIGSPIDVVGFLSPLLLSAKNNSLAAPNISISLYRLTTKVCCLLLLKKQPAYVRNYEECAYLILI**
************AQTFLCSAFAACFAELCTIPLDTAKVRLQLQ**************RGLMGTVVTIAREEGLWALWNGVIAGLHRQCIYGGLRIGLYDPVKTFLV****VGDIPLYQKIFAALLTGAIAIVVANPTDLVKVRLQAEG****GVPRRYYGALDAYCTIVRQEGLGALWTGLGPNIARNAIVNAAELASYDQVKETILKIPGFTDNIFTHILAGLGAGLFAVCIGSPIDVVG******************ISISLYRLTTKVCCLLLLKKQPAYVRNYEECAYLILISL
MSDLKLRPEISFAQTFLCSAFAACFAELCTIPLDTAKVRLQLQ********VSVSKYRGLMGTVVTIAREEGLWALWNGVIAGLHRQCIYGGLRIGLYDPVKTFLVGSDFVGDIPLYQKIFAALLTGAIAIVVANPTDLVKVRLQAEGKLPSGVPRRYYGALDAYCTIVRQEGLGALWTGLGPNIARNAIVNAAELASYDQVKETILKIPGFTDNIFTHILAGLGAGLFAVCIGSPIDVVGFLSPLLLSAKNNSLAAPNISISLYRLTTKVCCLLLLKKQPAYVRNYEECAYLILISL
********EISFAQTFLCSAFAACFAELCTIPLDTAKVRLQLQKKTASGDGVSVSKYRGLMGTVVTIAREEGLWALWNGVIAGLHRQCIYGGLRIGLYDPVKTFLVGSDFVGDIPLYQKIFAALLTGAIAIVVANPTDLVKVRLQAEGKLPSGVPRRYYGALDAYCTIVRQEGLGALWTGLGPNIARNAIVNAAELASYDQVKETILKIPGFTDNIFTHILAGLGAGLFAVCIGSPIDVVGFLSPLLLSAKNNSLAAPNISISLYRLTTKVCCLLLLKKQPAYVRNYEECAYLILISL
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiii
iiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
oooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHoooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
SSSSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MSDLKLRPEISFAQTFLCSAFAACFAELCTIPLDTAKVRLQLQKKTASGDGVSVSKYRGLMGTVVTIAREEGLWALWNGVIAGLHRQCIYGGLRIGLYDPVKTFLVGSDFVGDIPLYQKIFAALLTGAIAIVVANPTDLVKVRLQAEGKLPSGVPRRYYGALDAYCTIVRQEGLGALWTGLGPNIARNAIVNAAELASYDQVKETILKIPGFTDNIFTHILAGLGAGLFAVCIGSPIDVVGFLSPLLLSAKNNSLAAPNISISLYRLTTKVCCLLLLKKQPAYVRNYEECAYLILISL
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query298 2.2.26 [Sep-21-2011]
Q9ZWG1305 Mitochondrial uncoupling yes no 0.765 0.747 0.804 1e-111
O81845306 Mitochondrial uncoupling no no 0.781 0.761 0.752 1e-102
Q9N2I9311 Mitochondrial uncoupling yes no 0.755 0.723 0.478 2e-54
P56499308 Mitochondrial uncoupling yes no 0.734 0.711 0.488 3e-54
O97562309 Mitochondrial uncoupling yes no 0.738 0.711 0.484 3e-54
P56501308 Mitochondrial uncoupling yes no 0.734 0.711 0.484 5e-54
O77792311 Mitochondrial uncoupling yes no 0.744 0.713 0.471 2e-53
Q3SZI5309 Mitochondrial uncoupling no no 0.738 0.711 0.471 4e-53
P70406309 Mitochondrial uncoupling no no 0.738 0.711 0.480 8e-53
Q9W720310 Mitochondrial uncoupling yes no 0.875 0.841 0.424 8e-53
>sp|Q9ZWG1|PUMP2_ARATH Mitochondrial uncoupling protein 2 OS=Arabidopsis thaliana GN=PUMP2 PE=2 SV=1 Back     alignment and function desciption
 Score =  403 bits (1035), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 193/240 (80%), Positives = 216/240 (90%)

Query: 1   MSDLKLRPEISFAQTFLCSAFAACFAELCTIPLDTAKVRLQLQKKTASGDGVSVSKYRGL 60
           M+D K R EISF +TF+CSAFAACFAELCTIPLDTAKVRLQLQ+K  +GDG ++ KYRG 
Sbjct: 1   MADFKPRIEISFLETFICSAFAACFAELCTIPLDTAKVRLQLQRKIPTGDGENLPKYRGS 60

Query: 61  MGTVVTIAREEGLWALWNGVIAGLHRQCIYGGLRIGLYDPVKTFLVGSDFVGDIPLYQKI 120
           +GT+ TIAREEG+  LW GVIAGLHRQCIYGGLRIGLY+PVKT LVGSDF+GDIPLYQKI
Sbjct: 61  IGTLATIAREEGISGLWKGVIAGLHRQCIYGGLRIGLYEPVKTLLVGSDFIGDIPLYQKI 120

Query: 121 FAALLTGAIAIVVANPTDLVKVRLQAEGKLPSGVPRRYYGALDAYCTIVRQEGLGALWTG 180
            AALLTGAIAI+VANPTDLVKVRLQ+EGKLP+GVPRRY GA+DAY TIV+ EG+ ALWTG
Sbjct: 121 LAALLTGAIAIIVANPTDLVKVRLQSEGKLPAGVPRRYAGAVDAYFTIVKLEGVSALWTG 180

Query: 181 LGPNIARNAIVNAAELASYDQVKETILKIPGFTDNIFTHILAGLGAGLFAVCIGSPIDVV 240
           LGPNIARNAIVNAAELASYDQ+KETI+KIP F D++ TH+LAGL AG FAVCIGSPIDVV
Sbjct: 181 LGPNIARNAIVNAAELASYDQIKETIMKIPFFRDSVLTHLLAGLAAGFFAVCIGSPIDVV 240
PUMPS are mitochondrial transporter proteins that create proton leaks across the inner mitochondrial membrane, thus uncoupling oxidative phosphorylation. This leads to a decrease in the efficiency of oxidative phosphorylation and an increase in heat production. May be involved in protecting plant cells against oxidative stress damage.
Arabidopsis thaliana (taxid: 3702)
>sp|O81845|PUMP1_ARATH Mitochondrial uncoupling protein 1 OS=Arabidopsis thaliana GN=PUMP1 PE=1 SV=1 Back     alignment and function description
>sp|Q9N2I9|UCP3_CANFA Mitochondrial uncoupling protein 3 OS=Canis familiaris GN=UCP3 PE=2 SV=1 Back     alignment and function description
>sp|P56499|UCP3_RAT Mitochondrial uncoupling protein 3 OS=Rattus norvegicus GN=Ucp3 PE=2 SV=1 Back     alignment and function description
>sp|O97562|UCP2_PIG Mitochondrial uncoupling protein 2 OS=Sus scrofa GN=UCP2 PE=2 SV=1 Back     alignment and function description
>sp|P56501|UCP3_MOUSE Mitochondrial uncoupling protein 3 OS=Mus musculus GN=Ucp3 PE=2 SV=1 Back     alignment and function description
>sp|O77792|UCP3_BOVIN Mitochondrial uncoupling protein 3 OS=Bos taurus GN=UCP3 PE=2 SV=1 Back     alignment and function description
>sp|Q3SZI5|UCP2_BOVIN Mitochondrial uncoupling protein 2 OS=Bos taurus GN=UCP2 PE=2 SV=1 Back     alignment and function description
>sp|P70406|UCP2_MOUSE Mitochondrial uncoupling protein 2 OS=Mus musculus GN=Ucp2 PE=1 SV=1 Back     alignment and function description
>sp|Q9W720|UCP2_DANRE Mitochondrial uncoupling protein 2 OS=Danio rerio GN=ucp2 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query298
224059342305 predicted protein [Populus trichocarpa] 0.765 0.747 0.833 1e-113
255558838305 mitochondrial uncoupling protein, putati 0.758 0.740 0.820 1e-112
297796843305 ATUCP2 [Arabidopsis lyrata subsp. lyrata 0.765 0.747 0.808 1e-110
18424178305 uncoupling protein 2 [Arabidopsis thalia 0.765 0.747 0.804 1e-110
42573732272 uncoupling protein 2 [Arabidopsis thalia 0.828 0.908 0.789 1e-110
449450782300 PREDICTED: mitochondrial uncoupling prot 0.758 0.753 0.8 1e-109
225434708303 PREDICTED: mitochondrial uncoupling prot 0.802 0.788 0.8 1e-108
359478882302 PREDICTED: mitochondrial uncoupling prot 0.802 0.791 0.8 1e-108
356496148305 PREDICTED: mitochondrial uncoupling prot 0.805 0.786 0.770 1e-107
224087657305 predicted protein [Populus trichocarpa] 0.758 0.740 0.766 1e-106
>gi|224059342|ref|XP_002299831.1| predicted protein [Populus trichocarpa] gi|222847089|gb|EEE84636.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
 Score =  414 bits (1063), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 200/240 (83%), Positives = 220/240 (91%)

Query: 1   MSDLKLRPEISFAQTFLCSAFAACFAELCTIPLDTAKVRLQLQKKTASGDGVSVSKYRGL 60
           M+DLK   +ISF + FLCSAFAACFAE CTIPLDTAKVRLQLQ+KT + +GVS+ KYRGL
Sbjct: 1   MADLKPSSDISFVEIFLCSAFAACFAEFCTIPLDTAKVRLQLQRKTFASEGVSLPKYRGL 60

Query: 61  MGTVVTIAREEGLWALWNGVIAGLHRQCIYGGLRIGLYDPVKTFLVGSDFVGDIPLYQKI 120
           +GTV TIAREEGL ALW G+ AGLHRQ IYGGLRIGLY+PVK+FLVGSDFVGDIPLYQKI
Sbjct: 61  LGTVATIAREEGLAALWKGITAGLHRQFIYGGLRIGLYEPVKSFLVGSDFVGDIPLYQKI 120

Query: 121 FAALLTGAIAIVVANPTDLVKVRLQAEGKLPSGVPRRYYGALDAYCTIVRQEGLGALWTG 180
            AALLTGA+AIV+ANPTDLVKVRLQAEGKLP+GVP RY GALDAY TIVRQEGLGALWTG
Sbjct: 121 LAALLTGAMAIVIANPTDLVKVRLQAEGKLPAGVPGRYAGALDAYFTIVRQEGLGALWTG 180

Query: 181 LGPNIARNAIVNAAELASYDQVKETILKIPGFTDNIFTHILAGLGAGLFAVCIGSPIDVV 240
           LGPNIARNAI+NAAELASYD+VK+TIL+IPGFTD+ FTH+LAGLGAG FAVCIGSPIDVV
Sbjct: 181 LGPNIARNAIINAAELASYDEVKQTILQIPGFTDSAFTHVLAGLGAGFFAVCIGSPIDVV 240

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|255558838|ref|XP_002520442.1| mitochondrial uncoupling protein, putative [Ricinus communis] gi|223540284|gb|EEF41855.1| mitochondrial uncoupling protein, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|297796843|ref|XP_002866306.1| ATUCP2 [Arabidopsis lyrata subsp. lyrata] gi|297312141|gb|EFH42565.1| ATUCP2 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|18424178|ref|NP_568894.1| uncoupling protein 2 [Arabidopsis thaliana] gi|75315972|sp|Q9ZWG1.1|PUMP2_ARATH RecName: Full=Mitochondrial uncoupling protein 2; Short=AtPUMP2 gi|4063007|dbj|BAA36222.1| uncoupling protein [Arabidopsis thaliana] gi|9759228|dbj|BAB09640.1| uncoupling protein [Arabidopsis thaliana] gi|21593775|gb|AAM65742.1| uncoupling protein AtUCP2 [Arabidopsis thaliana] gi|332009741|gb|AED97124.1| uncoupling protein 2 [Arabidopsis thaliana] gi|385137896|gb|AFI41209.1| uncoupling protein 2, partial [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|42573732|ref|NP_974962.1| uncoupling protein 2 [Arabidopsis thaliana] gi|332009742|gb|AED97125.1| uncoupling protein 2 [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|449450782|ref|XP_004143141.1| PREDICTED: mitochondrial uncoupling protein 2-like [Cucumis sativus] gi|449496627|ref|XP_004160183.1| PREDICTED: mitochondrial uncoupling protein 2-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|225434708|ref|XP_002281053.1| PREDICTED: mitochondrial uncoupling protein 2-like isoform 1 [Vitis vinifera] Back     alignment and taxonomy information
>gi|359478882|ref|XP_003632181.1| PREDICTED: mitochondrial uncoupling protein 2-like isoform 2 [Vitis vinifera] gi|297745960|emb|CBI16016.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|356496148|ref|XP_003516932.1| PREDICTED: mitochondrial uncoupling protein 3-like [Glycine max] Back     alignment and taxonomy information
>gi|224087657|ref|XP_002308202.1| predicted protein [Populus trichocarpa] gi|118483177|gb|ABK93493.1| unknown [Populus trichocarpa] gi|222854178|gb|EEE91725.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query298
TAIR|locus:2154593305 UCP2 "uncoupling protein 2" [A 0.805 0.786 0.804 4.2e-102
TAIR|locus:2080300306 PUMP1 "plant uncoupling mitoch 0.781 0.761 0.752 1.3e-93
ZFIN|ZDB-GENE-040426-1317309 ucp3 "uncoupling protein 3" [D 0.751 0.724 0.484 1.5e-51
UNIPROTKB|O97562309 UCP2 "Mitochondrial uncoupling 0.738 0.711 0.484 2.4e-51
RGD|3933308 Ucp3 "uncoupling protein 3 (mi 0.734 0.711 0.488 8.3e-51
MGI|MGI:1099787308 Ucp3 "uncoupling protein 3 (mi 0.734 0.711 0.484 1.1e-50
MGI|MGI:109354309 Ucp2 "uncoupling protein 2 (mi 0.738 0.711 0.480 2.2e-50
UNIPROTKB|Q3SZI5309 UCP2 "Mitochondrial uncoupling 0.738 0.711 0.471 3.6e-50
RGD|3932309 Ucp2 "uncoupling protein 2 (mi 0.738 0.711 0.475 4.6e-50
UNIPROTKB|F1PWF8309 UCP2 "Mitochondrial uncoupling 0.738 0.711 0.475 4.6e-50
TAIR|locus:2154593 UCP2 "uncoupling protein 2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1012 (361.3 bits), Expect = 4.2e-102, P = 4.2e-102
 Identities = 193/240 (80%), Positives = 216/240 (90%)

Query:     1 MSDLKLRPEISFAQTFLCSAFAACFAELCTIPLDTAKVRLQLQKKTASGDGVSVSKYRGL 60
             M+D K R EISF +TF+CSAFAACFAELCTIPLDTAKVRLQLQ+K  +GDG ++ KYRG 
Sbjct:     1 MADFKPRIEISFLETFICSAFAACFAELCTIPLDTAKVRLQLQRKIPTGDGENLPKYRGS 60

Query:    61 MGTVVTIAREEGLWALWNGVIAGLHRQCIYGGLRIGLYDPVKTFLVGSDFVGDIPLYQKI 120
             +GT+ TIAREEG+  LW GVIAGLHRQCIYGGLRIGLY+PVKT LVGSDF+GDIPLYQKI
Sbjct:    61 IGTLATIAREEGISGLWKGVIAGLHRQCIYGGLRIGLYEPVKTLLVGSDFIGDIPLYQKI 120

Query:   121 FAALLTGAIAIVVANPTDLVKVRLQAEGKLPSGVPRRYYGALDAYCTIVRQEGLGALWTG 180
              AALLTGAIAI+VANPTDLVKVRLQ+EGKLP+GVPRRY GA+DAY TIV+ EG+ ALWTG
Sbjct:   121 LAALLTGAIAIIVANPTDLVKVRLQSEGKLPAGVPRRYAGAVDAYFTIVKLEGVSALWTG 180

Query:   181 LGPNIARNAIVNAAELASYDQVKETILKIPGFTDNIFTHILAGLGAGLFAVCIGSPIDVV 240
             LGPNIARNAIVNAAELASYDQ+KETI+KIP F D++ TH+LAGL AG FAVCIGSPIDVV
Sbjct:   181 LGPNIARNAIVNAAELASYDQIKETIMKIPFFRDSVLTHLLAGLAAGFFAVCIGSPIDVV 240
GO:0005739 "mitochondrion" evidence=ISM
GO:0006839 "mitochondrial transport" evidence=IEA
GO:0017077 "oxidative phosphorylation uncoupler activity" evidence=ISS
GO:0031966 "mitochondrial membrane" evidence=IEA
GO:0005794 "Golgi apparatus" evidence=IDA
GO:0006007 "glucose catabolic process" evidence=RCA
GO:0009853 "photorespiration" evidence=RCA
GO:0005886 "plasma membrane" evidence=IDA
TAIR|locus:2080300 PUMP1 "plant uncoupling mitochondrial protein 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-040426-1317 ucp3 "uncoupling protein 3" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
UNIPROTKB|O97562 UCP2 "Mitochondrial uncoupling protein 2" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
RGD|3933 Ucp3 "uncoupling protein 3 (mitochondrial, proton carrier)" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
MGI|MGI:1099787 Ucp3 "uncoupling protein 3 (mitochondrial, proton carrier)" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
MGI|MGI:109354 Ucp2 "uncoupling protein 2 (mitochondrial, proton carrier)" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
UNIPROTKB|Q3SZI5 UCP2 "Mitochondrial uncoupling protein 2" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
RGD|3932 Ucp2 "uncoupling protein 2 (mitochondrial, proton carrier)" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|F1PWF8 UCP2 "Mitochondrial uncoupling protein 2" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q9W720UCP2_DANRENo assigned EC number0.42490.87580.8419yesno
Q9ZWG1PUMP2_ARATHNo assigned EC number0.80410.76510.7475yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
estExt_fgenesh4_pg.C_LG_I1666
hypothetical protein (305 aa)
(Populus trichocarpa)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query298
pfam0015396 pfam00153, Mito_carr, Mitochondrial carrier protei 1e-23
pfam0015396 pfam00153, Mito_carr, Mitochondrial carrier protei 1e-19
PTZ00169300 PTZ00169, PTZ00169, ADP/ATP transporter on adenyla 5e-11
PTZ00169300 PTZ00169, PTZ00169, ADP/ATP transporter on adenyla 4e-09
>gnl|CDD|215754 pfam00153, Mito_carr, Mitochondrial carrier protein Back     alignment and domain information 
 Score = 92.3 bits (230), Expect = 1e-23
 Identities = 34/97 (35%), Positives = 51/97 (52%), Gaps = 3/97 (3%)

Query: 112 GDIPLYQKIFAALLTGAIAIVVANPTDLVKVRLQAEGKLPSGVPRRYYGALDAYCTIVRQ 171
             +     + A  + GAIA  V  P D+VK RLQ      +G  R+Y G LD +  I ++
Sbjct: 1   SPLSFLASLLAGGIAGAIAATVTYPLDVVKTRLQ---SSAAGGSRKYKGILDCFKKIYKE 57

Query: 172 EGLGALWTGLGPNIARNAIVNAAELASYDQVKETILK 208
           EG+  L+ GL PN+ R A   A    +Y+ +K+ +LK
Sbjct: 58  EGIRGLYKGLLPNLLRVAPAAAIYFGTYETLKKLLLK 94

Length = 96
>gnl|CDD|215754 pfam00153, Mito_carr, Mitochondrial carrier protein Back     alignment and domain information
>gnl|CDD|240302 PTZ00169, PTZ00169, ADP/ATP transporter on adenylate translocase; Provisional Back     alignment and domain information
>gnl|CDD|240302 PTZ00169, PTZ00169, ADP/ATP transporter on adenylate translocase; Provisional Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 298
KOG0764299 consensus Mitochondrial FAD carrier protein [Energ 100.0
KOG0752320 consensus Mitochondrial solute carrier protein [En 100.0
KOG0753317 consensus Mitochondrial fatty acid anion carrier p 100.0
KOG0758297 consensus Mitochondrial carnitine-acylcarnitine ca 100.0
PTZ00169300 ADP/ATP transporter on adenylate translocase; Prov 100.0
KOG0757319 consensus Mitochondrial carrier protein - Rim2p/Mr 100.0
KOG0760302 consensus Mitochondrial carrier protein MRS3/4 [En 100.0
KOG0754294 consensus Mitochondrial oxodicarboxylate carrier p 100.0
KOG0762311 consensus Mitochondrial carrier protein [Energy pr 100.0
KOG0759286 consensus Mitochondrial oxoglutarate/malate carrie 100.0
KOG0761361 consensus Mitochondrial carrier protein CGI-69 [En 100.0
PTZ00168259 mitochondrial carrier protein; Provisional 100.0
KOG0751694 consensus Mitochondrial aspartate/glutamate carrie 100.0
KOG0770353 consensus Predicted mitochondrial carrier protein 100.0
KOG0749298 consensus Mitochondrial ADP/ATP carrier proteins [ 100.0
KOG0036463 consensus Predicted mitochondrial carrier protein 100.0
KOG0768323 consensus Mitochondrial carrier protein PET8 [Ener 100.0
KOG0769308 consensus Predicted mitochondrial carrier protein 100.0
KOG0766297 consensus Predicted mitochondrial carrier protein 100.0
KOG0756299 consensus Mitochondrial tricarboxylate/dicarboxyla 100.0
KOG0765333 consensus Predicted mitochondrial carrier protein 100.0
KOG0763301 consensus Mitochondrial ornithine transporter [Ene 100.0
KOG0752320 consensus Mitochondrial solute carrier protein [En 100.0
KOG0750304 consensus Mitochondrial solute carrier protein [En 100.0
KOG0755320 consensus Mitochondrial oxaloacetate carrier prote 100.0
KOG0767333 consensus Mitochondrial phosphate carrier protein 100.0
KOG0753317 consensus Mitochondrial fatty acid anion carrier p 100.0
KOG0764299 consensus Mitochondrial FAD carrier protein [Energ 100.0
PTZ00169300 ADP/ATP transporter on adenylate translocase; Prov 100.0
KOG0759286 consensus Mitochondrial oxoglutarate/malate carrie 100.0
KOG0762311 consensus Mitochondrial carrier protein [Energy pr 100.0
KOG0768323 consensus Mitochondrial carrier protein PET8 [Ener 100.0
KOG0760302 consensus Mitochondrial carrier protein MRS3/4 [En 100.0
KOG0757319 consensus Mitochondrial carrier protein - Rim2p/Mr 100.0
KOG0758297 consensus Mitochondrial carnitine-acylcarnitine ca 100.0
PTZ00168259 mitochondrial carrier protein; Provisional 100.0
KOG0754294 consensus Mitochondrial oxodicarboxylate carrier p 99.97
KOG0761361 consensus Mitochondrial carrier protein CGI-69 [En 99.97
KOG0756299 consensus Mitochondrial tricarboxylate/dicarboxyla 99.96
KOG0765333 consensus Predicted mitochondrial carrier protein 99.96
KOG0750304 consensus Mitochondrial solute carrier protein [En 99.96
KOG0749298 consensus Mitochondrial ADP/ATP carrier proteins [ 99.96
KOG0766297 consensus Predicted mitochondrial carrier protein 99.96
KOG0755320 consensus Mitochondrial oxaloacetate carrier prote 99.96
KOG0751694 consensus Mitochondrial aspartate/glutamate carrie 99.96
KOG0763301 consensus Mitochondrial ornithine transporter [Ene 99.95
KOG0036463 consensus Predicted mitochondrial carrier protein 99.94
KOG2745321 consensus Mitochondrial carrier protein [General f 99.94
KOG0769308 consensus Predicted mitochondrial carrier protein 99.93
KOG0770353 consensus Predicted mitochondrial carrier protein 99.93
KOG1519297 consensus Predicted mitochondrial carrier protein 99.89
KOG0767333 consensus Mitochondrial phosphate carrier protein 99.88
PF0015395 Mito_carr: Mitochondrial carrier protein; InterPro 99.78
PF0015395 Mito_carr: Mitochondrial carrier protein; InterPro 99.76
KOG1519297 consensus Predicted mitochondrial carrier protein 99.64
KOG2954427 consensus Mitochondrial carrier protein [General f 99.39
KOG2745 321 consensus Mitochondrial carrier protein [General f 99.34
KOG2954427 consensus Mitochondrial carrier protein [General f 98.9
>KOG0764 consensus Mitochondrial FAD carrier protein [Energy production and conversion] Back     alignment and domain information 
Probab=100.00  E-value=4.7e-58  Score=366.79  Aligned_cols=273  Identities=22%  Similarity=0.265  Sum_probs=243.4

Q ss_pred             hHHHHHHHHHHhHhhHhhcchhhhhHhHhhcccccCCCCCCccccCCChHHHHHHHHHhhchhhhhcchhHHHHHHHhhh
Q 022364           12 FAQTFLCSAFAACFAELCTIPLDTAKVRLQLQKKTASGDGVSVSKYRGLMGTVVTIAREEGLWALWNGVIAGLHRQCIYG   91 (298)
Q Consensus        12 ~~~~~~~g~~a~~~~~~~~~Pld~ik~~~q~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~G~~~lyrG~~~~~~~~~~~~   91 (298)
                      -+..+++|..||+++++++||||++|+|+|++...    ....+.|+++.+++++|++.||++|||||+.|++++..+.+
T Consensus         5 ~~~~~iaG~~aG~~stl~vhPlDl~K~R~qa~~g~----~~~~~~y~g~~~~~~tI~r~eG~rGLY~Gl~P~v~G~~~sW   80 (299)
T KOG0764|consen    5 QWEPLIAGLSAGFASTLVVHPLDLVKIRFQASDGR----TSLRPAYKGIFGALKTIFRSEGLRGLYRGLSPNVLGSAPSW   80 (299)
T ss_pred             chhhhhhhhhhhhhhhhhccchhHhhhhhhhccCc----cccchhhccHHHHHHHHHHhhhHHHHhccCcHHHHhchhhH
Confidence            35566999999999999999999999999998322    23566899999999999999999999999999999999999


Q ss_pred             hhhhhcHHHHHHhhccCCCCCCCchHHHHHHHHHHHHhHHhhcCcHHHHHHHHHhhCCCCCCCCCCcCChHHHHHHHHHh
Q 022364           92 GLRIGLYDPVKTFLVGSDFVGDIPLYQKIFAALLTGAIAIVVANPTDLVKVRLQAEGKLPSGVPRRYYGALDAYCTIVRQ  171 (298)
Q Consensus        92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ag~~ag~~~~~~~~P~~~vk~r~q~~~~~~~~~~~~~~~~~~~~~~i~~~  171 (298)
                      ++||.+||.+|+++.+.......+...++.+++.||++..++++|++++|||++.+....  +...|+++++++++|+++
T Consensus        81 giYF~~Y~~~K~~~~~~~~~~~l~~~~~l~sa~~AGa~t~~lTNPIWVvKTRL~~Q~~~~--~~~~Y~~~f~a~rki~k~  158 (299)
T KOG0764|consen   81 GLYFFFYDFLKSFITEGFNSGLLSVLANLSSAAEAGAATTILTNPIWVVKTRLMLQSKNV--QSTAYKGMFDALRKIYKE  158 (299)
T ss_pred             HHHHHHHHHHHHHHhcCCCcccchHHHHHHHHHhhhHHHHHhcCCeEEEeehhhhhcccc--cccccccHHHHHHHHHHH
Confidence            999999999999998777766679999999999999999999999999999999997632  335899999999999999


Q ss_pred             hchhhcccccHHHHHHHHHHHhhHHHHHHHHHHHHhcCCCCCC----chHHHHHHHHHHHHHHHHhcchHHHHHhhhccc
Q 022364          172 EGLGALWTGLGPNIARNAIVNAAELASYDQVKETILKIPGFTD----NIFTHILAGLGAGLFAVCIGSPIDVVGFLSPLL  247 (298)
Q Consensus       172 ~G~~g~y~G~~~~~~~~~~~~~~~~~~ye~~~~~~~~~~~~~~----~~~~~~~~g~~ag~~~~~~t~Pldviktr~q~~  247 (298)
                      ||++|||+|+.|.++. +.+.+++|..||.+|....+..+.+.    +....+..+.++.++|+.+|||++|+|+|||.+
T Consensus       159 EG~rgLY~GlVP~L~G-vshgAiQF~~YE~lK~~~~~~~~~~~d~~l~n~~~i~~as~SKv~Ast~TYP~qVlRtRLQ~~  237 (299)
T KOG0764|consen  159 EGFRGLYKGLVPGLLG-VSHGAIQFPAYEELKLRKNRKQGRSTDNHLSNLDYIALASLSKVFASTLTYPHQVLRTRLQDQ  237 (299)
T ss_pred             HhHHHHHhhhhhHhhh-hchhhhhhhhHHHHHHHHHHhcCCCcccchhhHHHHHHHHHHHHHHHHhcchHHHHHHHHHhc
Confidence            9999999999999998 77999999999999999865433322    345667777799999999999999999999985


Q ss_pred             cccccCCCCCCchhHHHHHHHhhhccchhhcc-CCcchhccccchheee
Q 022364          248 LSAKNNSLAAPNISISLYRLTTKVCCLLLLKK-QPAYVRNYEECAYLIL  295 (298)
Q Consensus       248 ~~~~~~~~~~~~~~~~~~~~~~~eG~~~~~~G-~~~~~r~~~~~~~~~~  295 (298)
                      ..    ...+.+.+.+++++++.||++|||+| .++++|.+|++.|+.+
T Consensus       238 ~~----~~~~~~~~~lIk~t~r~eG~~GfYkG~~~nLvR~vPA~~ITF~  282 (299)
T KOG0764|consen  238 SD----NPRYRGVFDLIKKTWRNEGFRGFYKGLATNLVRTVPAACITFL  282 (299)
T ss_pred             cc----CcccccHHHHHHHHHHHhchhhHHHHhHHHHhhccccceeeee
Confidence            43    45667899999999999999999999 9999999999999875

>KOG0752 consensus Mitochondrial solute carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0753 consensus Mitochondrial fatty acid anion carrier protein/Uncoupling protein [Energy production and conversion] Back     alignment and domain information
>KOG0758 consensus Mitochondrial carnitine-acylcarnitine carrier protein [Energy production and conversion] Back     alignment and domain information
>PTZ00169 ADP/ATP transporter on adenylate translocase; Provisional Back     alignment and domain information
>KOG0757 consensus Mitochondrial carrier protein - Rim2p/Mrs12p [Energy production and conversion] Back     alignment and domain information
>KOG0760 consensus Mitochondrial carrier protein MRS3/4 [Energy production and conversion] Back     alignment and domain information
>KOG0754 consensus Mitochondrial oxodicarboxylate carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0762 consensus Mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0759 consensus Mitochondrial oxoglutarate/malate carrier proteins [Energy production and conversion] Back     alignment and domain information
>KOG0761 consensus Mitochondrial carrier protein CGI-69 [Energy production and conversion] Back     alignment and domain information
>PTZ00168 mitochondrial carrier protein; Provisional Back     alignment and domain information
>KOG0751 consensus Mitochondrial aspartate/glutamate carrier protein Aralar/Citrin (contains EF-hand Ca2+-binding domains) [Energy production and conversion] Back     alignment and domain information
>KOG0770 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0749 consensus Mitochondrial ADP/ATP carrier proteins [Energy production and conversion] Back     alignment and domain information
>KOG0036 consensus Predicted mitochondrial carrier protein [Nucleotide transport and metabolism] Back     alignment and domain information
>KOG0768 consensus Mitochondrial carrier protein PET8 [Energy production and conversion] Back     alignment and domain information
>KOG0769 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0766 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0756 consensus Mitochondrial tricarboxylate/dicarboxylate carrier proteins [Energy production and conversion] Back     alignment and domain information
>KOG0765 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0763 consensus Mitochondrial ornithine transporter [Energy production and conversion] Back     alignment and domain information
>KOG0752 consensus Mitochondrial solute carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0750 consensus Mitochondrial solute carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0755 consensus Mitochondrial oxaloacetate carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0767 consensus Mitochondrial phosphate carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0753 consensus Mitochondrial fatty acid anion carrier protein/Uncoupling protein [Energy production and conversion] Back     alignment and domain information
>KOG0764 consensus Mitochondrial FAD carrier protein [Energy production and conversion] Back     alignment and domain information
>PTZ00169 ADP/ATP transporter on adenylate translocase; Provisional Back     alignment and domain information
>KOG0759 consensus Mitochondrial oxoglutarate/malate carrier proteins [Energy production and conversion] Back     alignment and domain information
>KOG0762 consensus Mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0768 consensus Mitochondrial carrier protein PET8 [Energy production and conversion] Back     alignment and domain information
>KOG0760 consensus Mitochondrial carrier protein MRS3/4 [Energy production and conversion] Back     alignment and domain information
>KOG0757 consensus Mitochondrial carrier protein - Rim2p/Mrs12p [Energy production and conversion] Back     alignment and domain information
>KOG0758 consensus Mitochondrial carnitine-acylcarnitine carrier protein [Energy production and conversion] Back     alignment and domain information
>PTZ00168 mitochondrial carrier protein; Provisional Back     alignment and domain information
>KOG0754 consensus Mitochondrial oxodicarboxylate carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0761 consensus Mitochondrial carrier protein CGI-69 [Energy production and conversion] Back     alignment and domain information
>KOG0756 consensus Mitochondrial tricarboxylate/dicarboxylate carrier proteins [Energy production and conversion] Back     alignment and domain information
>KOG0765 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0750 consensus Mitochondrial solute carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0749 consensus Mitochondrial ADP/ATP carrier proteins [Energy production and conversion] Back     alignment and domain information
>KOG0766 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0755 consensus Mitochondrial oxaloacetate carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0751 consensus Mitochondrial aspartate/glutamate carrier protein Aralar/Citrin (contains EF-hand Ca2+-binding domains) [Energy production and conversion] Back     alignment and domain information
>KOG0763 consensus Mitochondrial ornithine transporter [Energy production and conversion] Back     alignment and domain information
>KOG0036 consensus Predicted mitochondrial carrier protein [Nucleotide transport and metabolism] Back     alignment and domain information
>KOG2745 consensus Mitochondrial carrier protein [General function prediction only] Back     alignment and domain information
>KOG0769 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0770 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG1519 consensus Predicted mitochondrial carrier protein [General function prediction only] Back     alignment and domain information
>KOG0767 consensus Mitochondrial phosphate carrier protein [Energy production and conversion] Back     alignment and domain information
>PF00153 Mito_carr: Mitochondrial carrier protein; InterPro: IPR018108 A variety of substrate carrier proteins that are involved in energy transfer are found in the inner mitochondrial membrane or integral to the membrane of other eukaryotic organelles such as the peroxisome [, , , , , ] Back     alignment and domain information
>PF00153 Mito_carr: Mitochondrial carrier protein; InterPro: IPR018108 A variety of substrate carrier proteins that are involved in energy transfer are found in the inner mitochondrial membrane or integral to the membrane of other eukaryotic organelles such as the peroxisome [, , , , , ] Back     alignment and domain information
>KOG1519 consensus Predicted mitochondrial carrier protein [General function prediction only] Back     alignment and domain information
>KOG2954 consensus Mitochondrial carrier protein [General function prediction only] Back     alignment and domain information
>KOG2745 consensus Mitochondrial carrier protein [General function prediction only] Back     alignment and domain information
>KOG2954 consensus Mitochondrial carrier protein [General function prediction only] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query298
2lck_A303 Structure Of The Mitochondrial Uncoupling Protein 2 7e-54
2lck_A 303 Structure Of The Mitochondrial Uncoupling Protein 2 4e-08
1okc_A297 Structure Of Mitochondrial AdpATP CARRIER IN COMPLE 1e-11
>pdb|2LCK|A Chain A, Structure Of The Mitochondrial Uncoupling Protein 2 Determined By Nmr Molecular Fragment Replacement Length = 303 Back     alignment and structure 
Iteration: 1

 Score =  207 bits (526), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 109/227 (48%), Positives = 149/227 (65%), Gaps = 7/227 (3%)
Query: 16  FLCSAFAACFAELCTIPLDTAKVRLQLQKKTASGDGVSVS-KYRGLMGTVVTIAREEGLW 74
           FL +  AAC A+L T PLDTAKVRLQ+Q ++      + S +YRG++GT++T+ R EG  
Sbjct: 5   FLGAGTAACIADLITFPLDTAKVRLQIQGESQGLVRTAASAQYRGVLGTILTMVRTEGPR 64
Query: 75  ALWNGVIAGLHRQCIYGGLRIGLYDPVKTFLV-GSDFVGDIPLYQKIFAALLTGAIAIVV 133
           +L+NG++AGL RQ  +  +RIGLYD VK F   GS+  G   +  ++ A   TGA+A+ V
Sbjct: 65  SLYNGLVAGLQRQMSFASVRIGLYDSVKQFYTKGSEHAG---IGSRLLAGSTTGALAVAV 121
Query: 134 ANPTDLVKVRLQAEGKLPSGVPRRYYGALDAYCTIVRQEGLGALWTGLGPNIARNAIVNA 193
           A PTD+VKVR QA+ +   G  RRY   ++AY TI R+EG+  LW G  PN+ARNAIVN 
Sbjct: 122 AQPTDVVKVRFQAQARAGGG--RRYQSTVEAYKTIAREEGIRGLWKGTSPNVARNAIVNC 179
Query: 194 AELASYDQVKETILKIPGFTDNIFTHILAGLGAGLFAVCIGSPIDVV 240
           AEL +YD +K+T+LK    TD++  H  +  GAG     I SP+DVV
Sbjct: 180 AELVTYDLIKDTLLKANLMTDDLPCHFTSAFGAGFCTTVIASPVDVV 226
>pdb|2LCK|A Chain A, Structure Of The Mitochondrial Uncoupling Protein 2 Determined By Nmr Molecular Fragment Replacement Length = 303 Back     alignment and structure
>pdb|1OKC|A Chain A, Structure Of Mitochondrial AdpATP CARRIER IN COMPLEX WITH Carboxyatractyloside Length = 297 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query298
2lck_A303 Mitochondrial uncoupling protein 2; membrane prote 7e-97
2lck_A303 Mitochondrial uncoupling protein 2; membrane prote 1e-40
2lck_A 303 Mitochondrial uncoupling protein 2; membrane prote 3e-27
1okc_A297 ADP, ATP carrier protein heart isoform T1; mitocho 7e-38
1okc_A297 ADP, ATP carrier protein heart isoform T1; mitocho 7e-35
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 1e-04
>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Length = 303 Back     alignment and structure
 Score =  286 bits (734), Expect = 7e-97
 Identities = 104/226 (46%), Positives = 144/226 (63%), Gaps = 5/226 (2%)

Query: 16  FLCSAFAACFAELCTIPLDTAKVRLQLQKKTASGD-GVSVSKYRGLMGTVVTIAREEGLW 74
           FL +  AAC A+L T PLDTAKVRLQ+Q ++       + ++YRG++GT++T+ R EG  
Sbjct: 5   FLGAGTAACIADLITFPLDTAKVRLQIQGESQGLVRTAASAQYRGVLGTILTMVRTEGPR 64

Query: 75  ALWNGVIAGLHRQCIYGGLRIGLYDPVKTFLVGSDFVGDIPLYQKIFAALLTGAIAIVVA 134
           +L+NG++AGL RQ  +  +RIGLYD VK F           +  ++ A   TGA+A+ VA
Sbjct: 65  SLYNGLVAGLQRQMSFASVRIGLYDSVKQFYTKGS--EHAGIGSRLLAGSTTGALAVAVA 122

Query: 135 NPTDLVKVRLQAEGKLPSGVPRRYYGALDAYCTIVRQEGLGALWTGLGPNIARNAIVNAA 194
            PTD+VKVR QA+ +      RRY   ++AY TI R+EG+  LW G  PN+ARNAIVN A
Sbjct: 123 QPTDVVKVRFQAQARAGG--GRRYQSTVEAYKTIAREEGIRGLWKGTSPNVARNAIVNCA 180

Query: 195 ELASYDQVKETILKIPGFTDNIFTHILAGLGAGLFAVCIGSPIDVV 240
           EL +YD +K+T+LK    TD++  H  +  GAG     I SP+DVV
Sbjct: 181 ELVTYDLIKDTLLKANLMTDDLPCHFTSAFGAGFCTTVIASPVDVV 226
>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Length = 303 Back     alignment and structure
>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Length = 303 Back     alignment and structure
>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Length = 297 Back     alignment and structure
>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Length = 297 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query298
1okc_A297 ADP, ATP carrier protein heart isoform T1; mitocho 100.0
2lck_A303 Mitochondrial uncoupling protein 2; membrane prote 100.0
2lck_A303 Mitochondrial uncoupling protein 2; membrane prote 100.0
1okc_A297 ADP, ATP carrier protein heart isoform T1; mitocho 100.0
>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Back     alignment and structure
Probab=100.00  E-value=2e-55  Score=378.26  Aligned_cols=277  Identities=20%  Similarity=0.295  Sum_probs=236.9

Q ss_pred             cCcchHHHHHHHHHHhHhhHhhcchhhhhHhHhhcccccCCCCCCccccCCChHHHHHHHHHhhchhhhhcchhHHHHHH
Q 022364            8 PEISFAQTFLCSAFAACFAELCTIPLDTAKVRLQLQKKTASGDGVSVSKYRGLMGTVVTIAREEGLWALWNGVIAGLHRQ   87 (298)
Q Consensus         8 ~~~~~~~~~~~g~~a~~~~~~~~~Pld~ik~~~q~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~G~~~lyrG~~~~~~~~   87 (298)
                      ++++++.++++|++||+++.++++|+|++|+|+|++.....  ......|+++++++++++++||+++||||+.+++++.
T Consensus         3 ~~~~~~~~~~aG~~ag~~~~~~~~Pld~vKtrlQ~~~~~~~--~~~~~~~~~~~~~~~~i~~~eG~~glyrG~~~~l~~~   80 (297)
T 1okc_A            3 QALSFLKDFLAGGVAAAISKTAVAPIERVKLLLQVQHASKQ--ISAEKQYKGIIDCVVRIPKEQGFLSFWRGNLANVIRY   80 (297)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHGGGCSS--CCGGGSCCSHHHHHHHHHHHHCGGGGGTTTHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHhcccccc--cccccccccHHHHHHHHHhccchhheecccHHHHHHH
Confidence            35678899999999999999999999999999999864321  1123478999999999999999999999999999999


Q ss_pred             HhhhhhhhhcHHHHHHhhccC-CCCCC--CchHHHHHHHHHHHHhHHhhcCcHHHHHHHHHhhCCCCCCCCCCcCChHHH
Q 022364           88 CIYGGLRIGLYDPVKTFLVGS-DFVGD--IPLYQKIFAALLTGAIAIVVANPTDLVKVRLQAEGKLPSGVPRRYYGALDA  164 (298)
Q Consensus        88 ~~~~~~~~~~~~~~~~~~~~~-~~~~~--~~~~~~~~ag~~ag~~~~~~~~P~~~vk~r~q~~~~~~~~~~~~~~~~~~~  164 (298)
                      ++..+++|.+||.+++.+.+. +....  .+....+++|++||+++.++++|+|+||+|+|++... .+....|.+++++
T Consensus        81 ~~~~~~~f~~ye~~k~~~~~~~~~~~~~~~~~~~~~~ag~~ag~~~~~~~~Pld~vktrlq~~~~~-~~~~~~~~~~~~~  159 (297)
T 1okc_A           81 FPTQALNFAFKDKYKQIFLGGVDRHKQFWRYFAGNLASGGAAGATSLCFVYPLDFARTRLAADVGK-GAAQREFTGLGNC  159 (297)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTCCTTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCS-STTTCSCSSHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhccccCcccchHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHhccccC-CCcCcCCCCHHHH
Confidence            999999999999999954322 22111  2346788999999999999999999999999998532 1223478999999


Q ss_pred             HHHHHHhhchhhcccccHHHHHHHHHHHhhHHHHHHHHHHHHhcCCCCCCchHHHHHHHHHHHHHHHHhcchHHHHHhhh
Q 022364          165 YCTIVRQEGLGALWTGLGPNIARNAIVNAAELASYDQVKETILKIPGFTDNIFTHILAGLGAGLFAVCIGSPIDVVGFLS  244 (298)
Q Consensus       165 ~~~i~~~~G~~g~y~G~~~~~~~~~~~~~~~~~~ye~~~~~~~~~~~~~~~~~~~~~~g~~ag~~~~~~t~Pldviktr~  244 (298)
                      +++|+++||++|||||+.+++++++|..+++|.+||.+|+.+.+.  ...+.+..+++|++||+++++++||+||||+||
T Consensus       160 ~~~i~~~eG~~glyrG~~~~l~~~~~~~~~~f~~ye~~k~~~~~~--~~~~~~~~~~~g~~ag~~a~~~t~P~dvvktr~  237 (297)
T 1okc_A          160 ITKIFKSDGLRGLYQGFNVSVQGIIIYRAAYFGVYDTAKGMLPDP--KNVHIIVSWMIAQTVTAVAGLVSYPFDTVRRRM  237 (297)
T ss_dssp             HHHHHHHHCHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHSSCGG--GCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHhccHHHhcCCchHHHHHHHHHHHHHHHHHHHHHHHhccC--CCccHHHHHHHHHHHHHHHHHhcChHHHHHHHH
Confidence            999999999999999999999999999999999999999976543  245678889999999999999999999999999


Q ss_pred             ccccccccCCCCCCchhHHHHHHHhhhccchhhcc-CCcchhcccc
Q 022364          245 PLLLSAKNNSLAAPNISISLYRLTTKVCCLLLLKK-QPAYVRNYEE  289 (298)
Q Consensus       245 q~~~~~~~~~~~~~~~~~~~~~~~~~eG~~~~~~G-~~~~~r~~~~  289 (298)
                      |++.........|.+.++++++++++||+++|||| .|+++|..+.
T Consensus       238 q~~~~~~~~~~~y~~~~~~~~~i~~~eG~~glyrG~~~~~~r~~~~  283 (297)
T 1okc_A          238 MMQSGRKGADIMYTGTVDCWRKIAKDEGPKAFFKGAWSNVLRGMGG  283 (297)
T ss_dssp             HTTTTCCGGGCSCSSHHHHHHHHHHHHCGGGGGTTHHHHHHHHHHH
T ss_pred             hhcCCCCCCCCCCCCHHHHHHHHHHHcCcCeEecchHHHHHhhccc
Confidence            98654433445678899999999999999999999 9999997543
>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Back     alignment and structure
>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Back     alignment and structure
>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 298
d1okca_292 f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos ta 8e-22
d1okca_292 f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos ta 4e-18
>d1okca_ f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos taurus), heart isoform t1 [TaxId: 9913]} Length = 292 Back     information, alignment and structure

class: Membrane and cell surface proteins and peptides
fold: Mitochondrial carrier
superfamily: Mitochondrial carrier
family: Mitochondrial carrier
domain: ADP,ATP carrier protein
species: Cow (Bos taurus), heart isoform t1 [TaxId: 9913]

 Score = 90.5 bits (223), Expect = 8e-22
 Identities = 47/195 (24%), Positives = 80/195 (41%), Gaps = 6/195 (3%)

Query: 10  ISFAQTFLCSAFAACFAELCTIPLDTAKVRLQLQKKTASGDGVSVSKYRGLMGTVVTIAR 69
           +SF + FL    AA  ++    P++  K+ LQ+Q   AS    +  +Y+G++  VV I +
Sbjct: 4   LSFLKDFLAGGVAAAISKTAVAPIERVKLLLQVQ--HASKQISAEKQYKGIIDCVVRIPK 61

Query: 70  EEGLWALWNGVIAGLHRQCIYGGLRIGLYDPVKTFLVGSDFVGD---IPLYQKIFAALLT 126
           E+G  + W G +A + R      L     D  K   +G               + +    
Sbjct: 62  EQGFLSFWRGNLANVIRYFPTQALNFAFKDKYKQIFLGGVDRHKQFWRYFAGNLASGGAA 121

Query: 127 GAIAIVVANPTDLVKVRLQAEGKLPSGVPRRYYGALDAYCTIVRQEGLGALWTGLGPNIA 186
           GA ++    P D  + RL A+    +   R + G  +    I + +GL  L+ G   ++ 
Sbjct: 122 GATSLCFVYPLDFARTRLAADVGKGA-AQREFTGLGNCITKIFKSDGLRGLYQGFNVSVQ 180

Query: 187 RNAIVNAAELASYDQ 201
              I  AA    YD 
Sbjct: 181 GIIIYRAAYFGVYDT 195
>d1okca_ f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos taurus), heart isoform t1 [TaxId: 9913]} Length = 292 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query298
d1okca_292 ADP,ATP carrier protein {Cow (Bos taurus), heart i 100.0
d1okca_292 ADP,ATP carrier protein {Cow (Bos taurus), heart i 100.0
>d1okca_ f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos taurus), heart isoform t1 [TaxId: 9913]} Back     information, alignment and structure
class: Membrane and cell surface proteins and peptides
fold: Mitochondrial carrier
superfamily: Mitochondrial carrier
family: Mitochondrial carrier
domain: ADP,ATP carrier protein
species: Cow (Bos taurus), heart isoform t1 [TaxId: 9913]

Probab=100.00  E-value=4.1e-52  Score=354.92  Aligned_cols=281  Identities=20%  Similarity=0.279  Sum_probs=247.5

Q ss_pred             cCcchHHHHHHHHHHhHhhHhhcchhhhhHhHhhcccccCCCCCCccccCCChHHHHHHHHHhhchhhhhcchhHHHHHH
Q 022364            8 PEISFAQTFLCSAFAACFAELCTIPLDTAKVRLQLQKKTASGDGVSVSKYRGLMGTVVTIAREEGLWALWNGVIAGLHRQ   87 (298)
Q Consensus         8 ~~~~~~~~~~~g~~a~~~~~~~~~Pld~ik~~~q~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~G~~~lyrG~~~~~~~~   87 (298)
                      ++.++.+++++|++|++++.+++||||+||+|+|++....  .......|+++++++++++++||+++||||+.+.++..
T Consensus         2 ~~~~~~~~~laG~~a~~i~~~~~~Pld~iK~r~Q~~~~~~--~~~~~~~~~~~~~~~~~i~~~~G~~~ly~G~~~~l~~~   79 (292)
T d1okca_           2 QALSFLKDFLAGGVAAAISKTAVAPIERVKLLLQVQHASK--QISAEKQYKGIIDCVVRIPKEQGFLSFWRGNLANVIRY   79 (292)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHGGGCS--SCCGGGSCCSHHHHHHHHHHHHCGGGGGTTTHHHHHHH
T ss_pred             CCchHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhcCCCCC--CCCcccccCCHHHHHHHHHHhhhhhhhhhccchhhhhh
Confidence            4678999999999999999999999999999999987543  23345678999999999999999999999999999999


Q ss_pred             HhhhhhhhhcHHHHHHhhccCCCCCC---CchHHHHHHHHHHHHhHHhhcCcHHHHHHHHHhhCCCCCCCCCCcCChHHH
Q 022364           88 CIYGGLRIGLYDPVKTFLVGSDFVGD---IPLYQKIFAALLTGAIAIVVANPTDLVKVRLQAEGKLPSGVPRRYYGALDA  164 (298)
Q Consensus        88 ~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~ag~~ag~~~~~~~~P~~~vk~r~q~~~~~~~~~~~~~~~~~~~  164 (298)
                      .+...++|..|+.+++.+.+......   ......+.+|.+|++++.++++|+|++|+|+|.+.... ...+.|.+..++
T Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~P~~~ik~r~~~~~~~~-~~~~~~~~~~~~  158 (292)
T d1okca_          80 FPTQALNFAFKDKYKQIFLGGVDRHKQFWRYFAGNLASGGAAGATSLCFVYPLDFARTRLAADVGKG-AAQREFTGLGNC  158 (292)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTCCTTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCSS-TTTCSCSSHHHH
T ss_pred             hcccchhHHHHHHHHHHHhcccccccccchhhhhhhhhhhhhhhhHHhhhhhhhhhheeeecccccc-ccccccccHHHH
Confidence            99999999999999999865443322   23456788999999999999999999999999987532 234478899999


Q ss_pred             HHHHHHhhchhhcccccHHHHHHHHHHHhhHHHHHHHHHHHHhcCCCCCCchHHHHHHHHHHHHHHHHhcchHHHHHhhh
Q 022364          165 YCTIVRQEGLGALWTGLGPNIARNAIVNAAELASYDQVKETILKIPGFTDNIFTHILAGLGAGLFAVCIGSPIDVVGFLS  244 (298)
Q Consensus       165 ~~~i~~~~G~~g~y~G~~~~~~~~~~~~~~~~~~ye~~~~~~~~~~~~~~~~~~~~~~g~~ag~~~~~~t~Pldviktr~  244 (298)
                      +++++++||+++||+|+.+++++++|+.+++|..||.+|+.+.+.  ...+....++++.+++.++++++||+||||+||
T Consensus       159 ~~~~~~~~G~~~l~~G~~~~~~~~~~~~~~~~~~~~~~k~~~~~~--~~~~~~~~~~~~~~~~~~a~~~t~P~dvvktR~  236 (292)
T d1okca_         159 ITKIFKSDGLRGLYQGFNVSVQGIIIYRAAYFGVYDTAKGMLPDP--KNVHIIVSWMIAQTVTAVAGLVSYPFDTVRRRM  236 (292)
T ss_dssp             HHHHHHHHCHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHSSCGG--GCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHhhhccchhhhhccccccccceehHhhhhhhhccchhhhcccc--cccchHHHHHHHHHHHHHHhhccccHHHHHHHH
Confidence            999999999999999999999999999999999999999976553  345778889999999999999999999999999


Q ss_pred             ccccccccCCCCCCchhHHHHHHHhhhccchhhcc-CCcchhccccchhe
Q 022364          245 PLLLSAKNNSLAAPNISISLYRLTTKVCCLLLLKK-QPAYVRNYEECAYL  293 (298)
Q Consensus       245 q~~~~~~~~~~~~~~~~~~~~~~~~~eG~~~~~~G-~~~~~r~~~~~~~~  293 (298)
                      |.+.........|.+.++++++++++||+++|||| .|+++|..++.+++
T Consensus       237 q~~~~~~~~~~~y~~~~~~~~~i~~~eG~~~lyrG~~~~~~r~i~~~i~~  286 (292)
T d1okca_         237 MMQSGRKGADIMYTGTVDCWRKIAKDEGPKAFFKGAWSNVLRGMGGAFVL  286 (292)
T ss_dssp             HTTTTCCGGGCSCSSHHHHHHHHHHHHCGGGGGTTHHHHHHHHHHHHHHH
T ss_pred             HhcCCCCCCCCCCCCHHHHHHHHHHhcCcCcccccHHHHHHHHHHHHhhh
Confidence            99877766667788999999999999999999999 99999988865443
>d1okca_ f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos taurus), heart isoform t1 [TaxId: 9913]} Back     information, alignment and structure