Citrus Sinensis ID: 022375

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------30
MAFSFSSLMVTLALGFLVVFTGKSSAQLSTNFYSKTCPKLLNTVKSAVQSAVSKERRMGASLLRLHFHDCFVNGCDGSILLDDTSSFTGEKTSGPNINSARGFEVVDDIKSKLGGPSWNVKLGRRDSKTASLAAANSGVIPPPTSTLSNLINRFQAKGLSAKDMVALSGAHTIGQARCVAFRNRIYNESNIESSFAKNRRGNCPRATGSGDNNLAPLDFQSPNKFDNQYYKHLLNQKGLLHSDQILFNGGSTDSLVSTYASNSKTFNSDFAAAMIKMGDISPLTGSIGEIRKNCRRPN
ccccHHHHHHHHHHHHHHHHHccccccccccccccccccHHHHHHHHHHHHHHHccccHHHHHHHcccccccccccccccccccccccccccccccccccccHHHHHHHHHHcccccccccccccccHHHHHHHHcccccccccccHHHHHHHHHHccccccccccccccccccccccccccccccccccccHHHHHHHHcccccccccccccccccccccHHHHHHHHHHHHHHcccccccHHHHcccccHHHHHHHHcccHHHHHHHHHHHHHHHccccccccccccccccccccc
cccHHHHHHHHHHHHHHHHHHcccccccEccccccccccHHHHHHHHHHHHHcccccHHHHHHHHHHHHHcccccccHHHcccccccccHHHccccccccccHHHHHHHHHHHccccccccEcEEEccccccHHHHHHHcccccccHHHHHHHHHHccccHHHHHHHHHHHHccEEEHHHcHHHcccHHcccHHHHHHHHHHcccccccccccEEEcccccccccccHHHHHHHccccccHHHHHHHHccccHHHHHHHHHcHHHHHHHHHHHHHHHcccccEEHHHcEccccccEcc
MAFSFSSLMVTLALGFLVVFTgkssaqlstnfysktcpkLLNTVKSAVQSAVSKERRMGASLLRLHFHdcfvngcdgsillddtssftgektsgpninsargfEVVDDiksklggpswnvklgrrdsktASLAaansgvippptstlSNLINRFqakglsakdMVALSGAHTIGQARCVAFRNRiynesniessfaknrrgncpratgsgdnnlapldfqspnkfdnQYYKHLLnqkgllhsdqilfnggstdSLVSTYASNSKTFNSDFAAAMIKmgdispltgsigeirkncrrpn
MAFSFSSLMVTLALGFLVVFTGKSSAQLSTNFYSKTCPKLLNTVKSAVQSAVSKERRMGASLLRLHFHDCFVNGCDGSILLDDTSSFTGEKtsgpninsargfeVVDDiksklggpswnvklgrRDSKTASLaaansgvippptstlSNLINRFQAKGLSAKDMVALSGAHTIGQARCVAFRNRIYNEsniessfaknrrgNCPRatgsgdnnlapLDFQSPNKFDNQYYKHLLNQKGLLHSDQILFNGGSTDSLVSTYASNSKTFNSDFAAAMIKMGdispltgsigeirkncrrpn
MAFSFSSLMVTLALGFLVVFTGKSSAQLSTNFYSKTCPKLLNTVKSAVQSAVSKERRMGASLLRLHFHDCFVNGCDGSILLDDTSSFTGEKTSGPNINSARGFEVVDDIKSKLGGPSWNVKLGRRDSKTASLAAANSGVIPPPTSTLSNLINRFQAKGLSAKDMVALSGAHTIGQARCVAFRNRIYNESNIESSFAKNRRGNCPRATGSGDNNLAPLDFQSPNKFDNQYYKHLLNQKGLLHSDQILFNGGSTDSLVSTYASNSKTFNSDFAAAMIKMGDISPLTGSIGEIRKNCRRPN
****FSSLMVTLALGFLVVFTGKSSAQLSTNFYSKTCPKLLNTVKSAVQSAVS*ERRMGASLLRLHFHDCFVNGCDGSILLDDT******************FEVVDDI**************************************SNLINRFQAKGLSAKDMVALSGAHTIGQARCVAFRNRIYNE************************************FDNQYYKHLLNQKGLLHSDQILFNGGSTDSLVSTYASNSKTFNSDFAAAMIKMGDIS*****************
******SLMVTLALGFLVVFTGKSSAQLSTNFYSKTCPKLLNTVKSAVQSAVSKERRMGASLLRLHFHDCFVNGCDGSILLDDTSSFTGEKTSGPNINSARGFEVVDDIKSKLGGPSWNVKLGRRDSKTASLAAANSGVIPPPTSTLSNLINRFQAKGLSAKDMVALSGAHTIGQARCVAFRNRIYNESNIESSFAKNRRGNC*********NLAPLDFQSPNKFDNQYYKHLLNQKGLLHSDQILFNGGSTDSLVSTYASNSKTFNSDFAAAMIKMGDISPLTGSIGEIRKNCRRPN
MAFSFSSLMVTLALGFLVVFTGKSSAQLSTNFYSKTCPKLLNTVKSAVQSAVSKERRMGASLLRLHFHDCFVNGCDGSILLDDTSSFTGEKTSGPNINSARGFEVVDDIKSKLGGPSWNVKLGRRDSKTASLAAANSGVIPPPTSTLSNLINRFQAKGLSAKDMVALSGAHTIGQARCVAFRNRIYNESNIESSFAKNRRGNCPRATGSGDNNLAPLDFQSPNKFDNQYYKHLLNQKGLLHSDQILFNGGSTDSLVSTYASNSKTFNSDFAAAMIKMGDISPLTGSIGEIRKNCRRPN
***SFSSLMVTLALGFLVVFTGKSSAQLSTNFYSKTCPKLLNTVKSAVQSAVSKERRMGASLLRLHFHDCFVNGCDGSILLDDTSSFTGEKTSGPNINSARGFEVVDDIKSKLGGPSWNVKLGRRDSKTASLAAANSGVIPPPTSTLSNLINRFQAKGLSAKDMVALSGAHTIGQARCVAFRNRIYNESNIESSFAKNRRGNCPRATGSGDNNLAPLDFQSPNKFDNQYYKHLLNQKGLLHSDQILFNGGSTDSLVSTYASNSKTFNSDFAAAMIKMGDISPLTGSIGEIRKNCRR**
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
SSSSSSSSSSSSSSSSSiiHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
MAFSFSSLMVTLALGFLVVFTGKSSAQLSTNFYSKTCPKLLNTVKSAVQSAVSKERRMGASLLRLHFHDCFVNGCDGSILLDDTSSFTGEKTSGPNINSARGFEVVDDIKSKLGGPSWNVKLGRRDSKTASLAAANSGVIPPPTSTLSNLINRFQAKGLSAKDMVALSGAHTIGQARCVAFRNRIYNESNIESSFAKNRRGNCPRATGSGDNNLAPLDFQSPNKFDNQYYKHLLNQKGLLHSDQILFNGGSTDSLVSTYASNSKTFNSDFAAAMIKMGDISPLTGSIGEIRKNCRRPN
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query298 2.2.26 [Sep-21-2011]
A7NY33321 Peroxidase 4 OS=Vitis vin yes no 0.979 0.909 0.690 1e-125
Q9LVL1325 Peroxidase 68 OS=Arabidop yes no 0.963 0.883 0.618 1e-110
Q9FLC0324 Peroxidase 52 OS=Arabidop no no 0.912 0.839 0.651 1e-109
P00434296 Peroxidase P7 OS=Brassica N/A no 0.909 0.915 0.653 1e-108
Q9LVL2316 Peroxidase 67 OS=Arabidop no no 0.976 0.920 0.610 1e-105
P22195316 Cationic peroxidase 1 OS= N/A no 0.939 0.886 0.597 1e-101
A5H452321 Peroxidase 70 OS=Zea mays N/A no 0.892 0.828 0.585 8e-96
Q0D3N0314 Peroxidase 2 OS=Oryza sat no no 0.875 0.831 0.565 9e-91
A2YPX3314 Peroxidase 2 OS=Oryza sat N/A no 0.875 0.831 0.561 3e-90
Q02200322 Lignin-forming anionic pe N/A no 0.926 0.857 0.540 1e-89
>sp|A7NY33|PER4_VITVI Peroxidase 4 OS=Vitis vinifera GN=GSVIVT00023967001 PE=1 SV=1 Back     alignment and function desciption
 Score =  448 bits (1153), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 221/320 (69%), Positives = 255/320 (79%), Gaps = 28/320 (8%)

Query: 4   SFSSLMVTLALGFLVVFTGKSSAQLSTNFYSKTCPKLLNTVKSAVQSAVSKERRMGASLL 63
           SFS  +V +ALG L +F G SSAQLSTNFYSKTCPK+ +TVKS VQSAVSKERRMGASLL
Sbjct: 5   SFS--IVVVALGVLALFAGSSSAQLSTNFYSKTCPKVFDTVKSGVQSAVSKERRMGASLL 62

Query: 64  RLHFHDCFVNGCDGSILLDDTSSFTGEKTSGPNINSARGFEVVDDIKSK----------- 112
           RL FHDCFVNGCD S+LLDDTSSFTGE+T+ PN NS RG  V+D+IKS+           
Sbjct: 63  RLFFHDCFVNGCDASVLLDDTSSFTGEQTAVPNKNSIRGLNVIDNIKSQVESVCPGVVSC 122

Query: 113 --------------LGGPSWNVKLGRRDSKTASLAAANSGVIPPPTSTLSNLINRFQAKG 158
                         LGGP W+VKLGRRDSKTASL+ AN+  IPPPTS+LSNLI++FQA+G
Sbjct: 123 ADIIAIAARDSVVILGGPDWDVKLGRRDSKTASLSGANNN-IPPPTSSLSNLISKFQAQG 181

Query: 159 LSAKDMVALSGAHTIGQARCVAFRNRIYNESNIESSFAKNRRGNCPRATGSGDNNLAPLD 218
           LS +DMVALSGAHTIGQARC +FR RIYNE+NI+SSFAK R+ +CP A+GSGDNNLAPLD
Sbjct: 182 LSTRDMVALSGAHTIGQARCTSFRARIYNETNIDSSFAKTRQASCPSASGSGDNNLAPLD 241

Query: 219 FQSPNKFDNQYYKHLLNQKGLLHSDQILFNGGSTDSLVSTYASNSKTFNSDFAAAMIKMG 278
            Q+P  FDN YYK+L+NQKGLLHSDQ+L+NGGSTDS V TY +N KTF SDF A MIKMG
Sbjct: 242 LQTPTTFDNYYYKNLINQKGLLHSDQVLYNGGSTDSTVKTYVNNPKTFTSDFVAGMIKMG 301

Query: 279 DISPLTGSIGEIRKNCRRPN 298
           DI+PLTGS GEIRK+C + N
Sbjct: 302 DITPLTGSEGEIRKSCGKVN 321
Removal of H(2)O(2), oxidation of toxic reductants, biosynthesis and degradation of lignin, suberization, auxin catabolism, response to environmental stresses such as wounding, pathogen attack and oxidative stress. These functions might be dependent on each isozyme/isoform in each plant tissue.
Vitis vinifera (taxid: 29760)
EC: 1EC: .EC: 1EC: 1EC: .EC: 1EC: .EC: 7
>sp|Q9LVL1|PER68_ARATH Peroxidase 68 OS=Arabidopsis thaliana GN=PER68 PE=2 SV=1 Back     alignment and function description
>sp|Q9FLC0|PER52_ARATH Peroxidase 52 OS=Arabidopsis thaliana GN=PER52 PE=2 SV=1 Back     alignment and function description
>sp|P00434|PERP7_BRARA Peroxidase P7 OS=Brassica rapa PE=1 SV=3 Back     alignment and function description
>sp|Q9LVL2|PER67_ARATH Peroxidase 67 OS=Arabidopsis thaliana GN=PER67 PE=2 SV=1 Back     alignment and function description
>sp|P22195|PER1_ARAHY Cationic peroxidase 1 OS=Arachis hypogaea GN=PNC1 PE=1 SV=2 Back     alignment and function description
>sp|A5H452|PER70_MAIZE Peroxidase 70 OS=Zea mays GN=PER70 PE=1 SV=1 Back     alignment and function description
>sp|Q0D3N0|PER2_ORYSJ Peroxidase 2 OS=Oryza sativa subsp. japonica GN=PRX112 PE=2 SV=1 Back     alignment and function description
>sp|A2YPX3|PER2_ORYSI Peroxidase 2 OS=Oryza sativa subsp. indica GN=PRX112 PE=3 SV=2 Back     alignment and function description
>sp|Q02200|PERX_NICSY Lignin-forming anionic peroxidase OS=Nicotiana sylvestris PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query298
224126945325 predicted protein [Populus trichocarpa] 0.989 0.907 0.706 1e-125
225434381321 PREDICTED: peroxidase 4 [Vitis vinifera] 0.979 0.909 0.690 1e-123
39777532330 peroxidase precursor [Quercus suber] 0.989 0.893 0.672 1e-122
39777536330 peroxidase precursor [Quercus suber] 0.976 0.881 0.671 1e-120
225448619321 PREDICTED: peroxidase 4 [Vitis vinifera] 0.979 0.909 0.660 1e-118
196051136330 putative secretory peroxidase [Catharant 0.969 0.875 0.663 1e-117
5381253321 peroxidase [Nicotiana tabacum] 0.983 0.912 0.661 1e-117
224128886322 predicted protein [Populus trichocarpa] 0.983 0.909 0.656 1e-116
19698446320 class III peroxidase [Gossypium hirsutum 0.989 0.921 0.653 1e-115
356509058320 PREDICTED: peroxidase 52-like isoform 1 0.966 0.9 0.662 1e-115
>gi|224126945|ref|XP_002319968.1| predicted protein [Populus trichocarpa] gi|222858344|gb|EEE95891.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
 Score =  455 bits (1170), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 226/320 (70%), Positives = 250/320 (78%), Gaps = 25/320 (7%)

Query: 4   SFSSLMVTLALGFLVVFTGKSSAQLSTNFYSKTCPKLLNTVKSAVQSAVSKERRMGASLL 63
           SFSS M    L FLV+FT  SSAQLSTNFYSK+CPK+   VKS VQSAVSKERRMGASL+
Sbjct: 6   SFSSYMAIFTLAFLVIFTSHSSAQLSTNFYSKSCPKVFGAVKSVVQSAVSKERRMGASLV 65

Query: 64  RLHFHDCFVNGCDGSILLDDTSSFTGEKTSGPNINSARGFEVVDDIKSK----------- 112
           RL FHDCFV GCDGSILL+DTSSFTGE+T+GPN NS RGF VV  IKS+           
Sbjct: 66  RLFFHDCFVKGCDGSILLEDTSSFTGEQTAGPNNNSVRGFNVVAKIKSQVEKVCPGIVSC 125

Query: 113 --------------LGGPSWNVKLGRRDSKTASLAAANSGVIPPPTSTLSNLINRFQAKG 158
                         LGGP WNVKLGRRDSKTASL+AANSGVIPPPTSTLSNLINRF +KG
Sbjct: 126 ADIVAIAARDSTVILGGPFWNVKLGRRDSKTASLSAANSGVIPPPTSTLSNLINRFNSKG 185

Query: 159 LSAKDMVALSGAHTIGQARCVAFRNRIYNESNIESSFAKNRRGNCPRATGSGDNNLAPLD 218
           LS KDMVALSG+HTIGQARC +FR RIYNE+NI+SSFA  R+ NCP     GDN LAPLD
Sbjct: 186 LSVKDMVALSGSHTIGQARCTSFRARIYNETNIDSSFATTRQKNCPFPGPKGDNKLAPLD 245

Query: 219 FQSPNKFDNQYYKHLLNQKGLLHSDQILFNGGSTDSLVSTYASNSKTFNSDFAAAMIKMG 278
            Q+P  FDN+YYK+L++QKGLLHSDQ+LFNGGSTDSLV TY+SN KTF+SDF  AMIKMG
Sbjct: 246 VQTPTSFDNKYYKNLISQKGLLHSDQVLFNGGSTDSLVRTYSSNPKTFSSDFVTAMIKMG 305

Query: 279 DISPLTGSIGEIRKNCRRPN 298
           DI PLTGS GEIRK C + N
Sbjct: 306 DIDPLTGSQGEIRKICSKRN 325

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|225434381|ref|XP_002269918.1| PREDICTED: peroxidase 4 [Vitis vinifera] gi|223635590|sp|A7NY33.1|PER4_VITVI RecName: Full=Peroxidase 4; Flags: Precursor gi|297745788|emb|CBI15844.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|39777532|gb|AAR31106.1| peroxidase precursor [Quercus suber] Back     alignment and taxonomy information
>gi|39777536|gb|AAR31108.1| peroxidase precursor [Quercus suber] Back     alignment and taxonomy information
>gi|225448619|ref|XP_002278996.1| PREDICTED: peroxidase 4 [Vitis vinifera] Back     alignment and taxonomy information
>gi|196051136|gb|ABV24960.2| putative secretory peroxidase [Catharanthus roseus] Back     alignment and taxonomy information
>gi|5381253|dbj|BAA82306.1| peroxidase [Nicotiana tabacum] Back     alignment and taxonomy information
>gi|224128886|ref|XP_002328991.1| predicted protein [Populus trichocarpa] gi|222839225|gb|EEE77576.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|19698446|gb|AAL93151.1|AF485265_1 class III peroxidase [Gossypium hirsutum] Back     alignment and taxonomy information
>gi|356509058|ref|XP_003523269.1| PREDICTED: peroxidase 52-like isoform 1 [Glycine max] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query298
TAIR|locus:2161283316 AT5G58390 [Arabidopsis thalian 0.624 0.588 0.709 7.5e-101
TAIR|locus:2161193325 AT5G58400 [Arabidopsis thalian 0.624 0.572 0.688 1.2e-100
TAIR|locus:2012607321 AT1G14550 [Arabidopsis thalian 0.620 0.576 0.560 1.2e-77
TAIR|locus:2053129338 AT2G18150 [Arabidopsis thalian 0.610 0.538 0.507 3.7e-74
TAIR|locus:2012597315 PER4 "peroxidase 4" [Arabidops 0.630 0.596 0.507 2e-73
TAIR|locus:2170204335 PA2 "peroxidase 2" [Arabidopsi 0.620 0.552 0.487 1.4e-72
TAIR|locus:2028280346 AT1G44970 [Arabidopsis thalian 0.597 0.514 0.521 2.3e-72
TAIR|locus:2115335331 AT4G36430 [Arabidopsis thalian 0.610 0.549 0.507 2.6e-71
UNIPROTKB|Q9LEH3327 pod "Peroxidase 15" [Ipomoea b 0.620 0.565 0.456 6e-68
TAIR|locus:2170214358 AT5G06730 [Arabidopsis thalian 0.620 0.516 0.446 7.7e-68
TAIR|locus:2161283 AT5G58390 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 695 (249.7 bits), Expect = 7.5e-101, Sum P(2) = 7.5e-101
 Identities = 132/186 (70%), Positives = 156/186 (83%)

Query:   113 LGGPSWNVKLGRRDSKTASLAAANSGVIPPPTSTLSNLINRFQAKGLSAKDMVALSGAHT 172
             LGGP W+VKLGRRDS TA+ AAANSGVIPPP +TLSNLINRF+A+GLS +DMVALSGAHT
Sbjct:   131 LGGPGWSVKLGRRDSTTANFAAANSGVIPPPITTLSNLINRFKAQGLSTRDMVALSGAHT 190

Query:   173 IGQARCVAFRNRIYNESNIESSFAKNRRGNCPRATGSGDNNLAPLDFQSPNKFDNQYYKH 232
             IG+A+CV FRNRIYN SNI++SFA ++R NCP  +GSGDN  A LD +SP++FD+ +YK 
Sbjct:   191 IGRAQCVTFRNRIYNASNIDTSFAISKRRNCPATSGSGDNKKANLDVRSPDRFDHGFYKQ 250

Query:   233 LLNQKGLLHSDQILFNGGSTDSLVSTYASNSKTFNSDFAAAMIKMGDISPLTGSIGEIRK 292
             LL++KGLL SDQ+LFN G TDSLV  Y+ N   F  DFA AMIKMGDISPLTGS G+IR+
Sbjct:   251 LLSKKGLLTSDQVLFNNGPTDSLVIAYSHNLNAFYRDFARAMIKMGDISPLTGSNGQIRQ 310

Query:   293 NCRRPN 298
             NCRRPN
Sbjct:   311 NCRRPN 316
GO:0004601 "peroxidase activity" evidence=IEA;ISS
GO:0005576 "extracellular region" evidence=ISM
GO:0006979 "response to oxidative stress" evidence=IEA
GO:0020037 "heme binding" evidence=IEA
GO:0055114 "oxidation-reduction process" evidence=IEA
TAIR|locus:2161193 AT5G58400 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2012607 AT1G14550 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2053129 AT2G18150 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2012597 PER4 "peroxidase 4" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2170204 PA2 "peroxidase 2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2028280 AT1G44970 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2115335 AT4G36430 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
UNIPROTKB|Q9LEH3 pod "Peroxidase 15" [Ipomoea batatas (taxid:4120)] Back     alignment and assigned GO terms
TAIR|locus:2170214 AT5G06730 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q05855PER1_WHEAT1, ., 1, 1, ., 1, ., 70.50310.92610.8846N/Ano
P22195PER1_ARAHY1, ., 1, 1, ., 1, ., 70.59740.93950.8860N/Ano
Q02200PERX_NICSY1, ., 1, 1, ., 1, ., 70.54090.92610.8571N/Ano
A2YPX3PER2_ORYSI1, ., 1, 1, ., 1, ., 70.56160.87580.8312N/Ano
P00434PERP7_BRARA1, ., 1, 1, ., 1, ., 70.65310.90930.9155N/Ano
Q9LVL1PER68_ARATH1, ., 1, 1, ., 1, ., 70.61850.96300.8830yesno
A7NY33PER4_VITVI1, ., 1, 1, ., 1, ., 70.69060.97980.9096yesno
A5H454PER66_MAIZE1, ., 1, 1, ., 1, ., 70.54260.86910.8093N/Ano
A5H453PER42_MAIZE1, ., 1, 1, ., 1, ., 70.52010.88590.8224N/Ano
A5H452PER70_MAIZE1, ., 1, 1, ., 1, ., 70.58560.89260.8286N/Ano

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
4th Layer1.11.1.70.991
3rd Layer1.11.10.976

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
estExt_Genewise1_v1.C_LG_XIII0228
hypothetical protein (326 aa)
(Populus trichocarpa)
Predicted Functional Partners:
gw1.XIV.3012.1
aspartate transaminase (EC-2.6.1.1) (403 aa)
     •  0.899
gw1.VI.2755.1
aspartate transaminase (EC-2.6.1.1) (397 aa)
     •  0.899
gw1.41.216.1
histidinol-phosphate aminotransferase (366 aa)
     •  0.899
gw1.28.655.1
annotation not avaliable (78 aa)
     •  0.899
f5h
SubName- Full=Ferulate-5-hydroxylase; Flags- Precursor; (501 aa)
     •  0.899
grail3.0013044701
aspartate transaminase (EC-2.6.1.1) (466 aa)
     •  0.899
PAL
RecName- Full=Phenylalanine ammonia-lyase; EC=4.3.1.24;; This is a key enzyme of plant metaboli [...] (715 aa)
     •  0.899
SAD
SubName- Full=Cinnamyl alcohol dehydrogenase; (362 aa)
     •  0.899
fgenesh4_pg.C_scaffold_803000002
hypothetical protein (316 aa)
     •  0.899
AMT7
aminotransferase family protein (EC-2.6.1.5) (407 aa)
     •  0.899

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query298
cd00693298 cd00693, secretory_peroxidase, Horseradish peroxid 1e-144
PLN03030324 PLN03030, PLN03030, cationic peroxidase; Provision 6e-58
pfam00141180 pfam00141, peroxidase, Peroxidase 6e-53
cd00314255 cd00314, plant_peroxidase_like, Heme-dependent per 2e-27
cd00691253 cd00691, ascorbate_peroxidase, Ascorbate peroxidas 1e-21
PLN02608289 PLN02608, PLN02608, L-ascorbate peroxidase 2e-11
PLN02364250 PLN02364, PLN02364, L-ascorbate peroxidase 1 6e-11
PLN02879251 PLN02879, PLN02879, L-ascorbate peroxidase 5e-10
cd00692328 cd00692, ligninase, Ligninase and other manganese- 6e-07
cd08201264 cd08201, plant_peroxidase_like_1, Uncharacterized 3e-06
pfam00141180 pfam00141, peroxidase, Peroxidase 7e-04
>gnl|CDD|173827 cd00693, secretory_peroxidase, Horseradish peroxidase and related secretory plant peroxidases Back     alignment and domain information 
 Score =  408 bits (1051), Expect = e-144
 Identities = 145/302 (48%), Positives = 191/302 (63%), Gaps = 37/302 (12%)

Query: 27  QLSTNFYSKTCPKLLNTVKSAVQSAVSKERRMGASLLRLHFHDCFVNGCDGSILLDDTSS 86
           QLS  FYSK+CP   + V+S V++AV  + R+ A+LLRLHFHDCFV GCD S+LLD T++
Sbjct: 1   QLSVGFYSKSCPNAESIVRSVVRAAVKADPRLAAALLRLHFHDCFVRGCDASVLLDSTAN 60

Query: 87  FTGEKTSGPNINSARGFEVVDDIKSKL-------------------------GGPSWNVK 121
            T EK + PN+ S RGF+V+DDIK+ L                         GGPS+ V 
Sbjct: 61  NTSEKDAPPNL-SLRGFDVIDDIKAALEAACPGVVSCADILALAARDAVVLAGGPSYEVP 119

Query: 122 LGRRDSKTASLAAANSGVIPPPTSTLSNLINRFQAKGLSAKDMVALSGAHTIGQARCVAF 181
           LGRRD + +S  A + G +P P  ++S LI+ F +KGL+  D+VALSGAHTIG+A C +F
Sbjct: 120 LGRRDGRVSS--ANDVGNLPSPFFSVSQLISLFASKGLTVTDLVALSGAHTIGRAHCSSF 177

Query: 182 RNRIYNESN-------IESSFAKNRRGNCPRATGSGDNNLAPLDFQSPNKFDNQYYKHLL 234
            +R+YN S        ++ ++A   R  CP   G  D+ L PLD  +PN FDN YYK+LL
Sbjct: 178 SDRLYNFSGTGDPDPTLDPAYAAQLRKKCPA--GGDDDTLVPLDPGTPNTFDNSYYKNLL 235

Query: 235 NQKGLLHSDQILFNGGSTDSLVSTYASNSKTFNSDFAAAMIKMGDISPLTGSIGEIRKNC 294
             +GLL SDQ L +   T ++V+ YA+N   F  DFAAAM+KMG+I  LTGS GEIRKNC
Sbjct: 236 AGRGLLTSDQALLSDPRTRAIVNRYAANQDAFFRDFAAAMVKMGNIGVLTGSQGEIRKNC 295

Query: 295 RR 296
           R 
Sbjct: 296 RV 297

Secretory peroxidases belong to class III of the plant heme-dependent peroxidase superfamily. All members of the superfamily share a heme prosthetic group and catalyze a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. Class III peroxidases are found in the extracellular space or in the vacuole in plants where they have been implicated in hydrogen peroxide detoxification, auxin catabolism and lignin biosynthesis, and stress response. Class III peroxidases contain four conserved disulphide bridges and two conserved calcium binding sites. Length = 298
>gnl|CDD|215545 PLN03030, PLN03030, cationic peroxidase; Provisional Back     alignment and domain information
>gnl|CDD|215745 pfam00141, peroxidase, Peroxidase Back     alignment and domain information
>gnl|CDD|173823 cd00314, plant_peroxidase_like, Heme-dependent peroxidases similar to plant peroxidases Back     alignment and domain information
>gnl|CDD|173825 cd00691, ascorbate_peroxidase, Ascorbate peroxidases and cytochrome C peroxidases Back     alignment and domain information
>gnl|CDD|178218 PLN02608, PLN02608, L-ascorbate peroxidase Back     alignment and domain information
>gnl|CDD|166005 PLN02364, PLN02364, L-ascorbate peroxidase 1 Back     alignment and domain information
>gnl|CDD|178467 PLN02879, PLN02879, L-ascorbate peroxidase Back     alignment and domain information
>gnl|CDD|173826 cd00692, ligninase, Ligninase and other manganese-dependent fungal peroxidases Back     alignment and domain information
>gnl|CDD|173829 cd08201, plant_peroxidase_like_1, Uncharacterized family of plant peroxidase-like proteins Back     alignment and domain information
>gnl|CDD|215745 pfam00141, peroxidase, Peroxidase Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 298
PLN03030324 cationic peroxidase; Provisional 100.0
cd00693298 secretory_peroxidase Horseradish peroxidase and re 100.0
PLN02608289 L-ascorbate peroxidase 100.0
PF00141230 peroxidase: Peroxidase; InterPro: IPR002016 Peroxi 100.0
cd00691253 ascorbate_peroxidase Ascorbate peroxidases and cyt 100.0
PLN02364250 L-ascorbate peroxidase 1 100.0
cd00692328 ligninase Ligninase and other manganese-dependent 100.0
PLN02879251 L-ascorbate peroxidase 100.0
cd00314255 plant_peroxidase_like Heme-dependent peroxidases s 100.0
cd00649409 catalase_peroxidase_1 N-terminal catalytic domain 100.0
TIGR00198 716 cat_per_HPI catalase/peroxidase HPI. Note that the 100.0
PRK15061 726 catalase/hydroperoxidase HPI(I); Provisional 100.0
cd08201264 plant_peroxidase_like_1 Uncharacterized family of 100.0
cd08200297 catalase_peroxidase_2 C-terminal non-catalytic dom 99.97
COG0376 730 KatG Catalase (peroxidase I) [Inorganic ion transp 99.94
TIGR00198716 cat_per_HPI catalase/peroxidase HPI. Note that the 99.94
PRK15061726 catalase/hydroperoxidase HPI(I); Provisional 99.93
COG0376730 KatG Catalase (peroxidase I) [Inorganic ion transp 97.75
PTZ00411333 transaldolase-like protein; Provisional 86.76
>PLN03030 cationic peroxidase; Provisional Back     alignment and domain information 
Probab=100.00  E-value=3.4e-96  Score=691.01  Aligned_cols=267  Identities=39%  Similarity=0.717  Sum_probs=252.4

Q ss_pred             CCCCcCcccccCCChhHHHHHHHHHHHHHHhCcccccchhheeeccccCcCCCccccccCCCCCCCcCCCCCCCCchhhH
Q 022375           24 SSAQLSTNFYSKTCPKLLNTVKSAVQSAVSKERRMGASLLRLHFHDCFVNGCDGSILLDDTSSFTGEKTSGPNINSARGF  103 (298)
Q Consensus        24 ~~~~L~~~fY~~sCP~~e~iV~~~v~~~~~~d~~~aa~llRL~FHDCfv~GCDaSiLl~~~~~~~~Ek~~~~N~~~l~gf  103 (298)
                      +.++|+++||++|||++|+||+++|++++.+||+++|++|||+||||||+||||||||+++   .+||++++|. +++||
T Consensus        21 ~~~~L~~~fY~~sCP~aE~iV~~~v~~~~~~d~~~aa~llRL~FHDCfv~GCDaSvLl~~~---~~Ek~a~~N~-~l~Gf   96 (324)
T PLN03030         21 QGQGTRVGFYSTTCPQAESIVRKTVQSHFQSNPAIAPGLLRMHFHDCFVRGCDASILIDGS---NTEKTALPNL-LLRGY   96 (324)
T ss_pred             hhccCccchhhCcCCCHHHHHHHHHHHHHhhCcccchhhhhhhhhhheecCCceEEeeCCC---cccccCCCCc-CcchH
Confidence            3467999999999999999999999999999999999999999999999999999999965   3699999998 99999


Q ss_pred             HHHHHHHhh-------------------------cCCCceeecccccCCCcccccccCCCCCCCCCCCHHHHHHHHHHCC
Q 022375          104 EVVDDIKSK-------------------------LGGPSWNVKLGRRDSKTASLAAANSGVIPPPTSTLSNLINRFQAKG  158 (298)
Q Consensus       104 ~~Id~iK~~-------------------------~GGP~~~v~~GRrD~~~s~~~~~~~~~LP~p~~~~~~l~~~F~~~G  158 (298)
                      ++||.||++                         +|||.|+|++||||+++|.+.++. + ||+|+.++++|++.|++||
T Consensus        97 ~~i~~iK~~~e~~CPg~VSCADilalAarDaV~~~gGP~~~v~~GRrDg~~s~~~~~~-~-LP~p~~~~~~l~~~F~~~G  174 (324)
T PLN03030         97 DVIDDAKTQLEAACPGVVSCADILALAARDSVVLTNGLTWPVPTGRRDGRVSLASDAS-N-LPGFTDSIDVQKQKFAAKG  174 (324)
T ss_pred             HHHHHHHHHHHhhCCCcccHHHHHHHHhhccccccCCCceeeeccccCCCCCCccccc-C-CcCCCCCHHHHHHHHHHcC
Confidence            999999987                         899999999999999999887775 7 9999999999999999999


Q ss_pred             CChhhhHhhhcCccccccccccccccccC--------CCCcCHHHHHHhhccCCCCCCCCCCCCCCCCCCCCCccChHHH
Q 022375          159 LSAKDMVALSGAHTIGQARCVAFRNRIYN--------ESNIESSFAKNRRGNCPRATGSGDNNLAPLDFQSPNKFDNQYY  230 (298)
Q Consensus       159 l~~~dlVaLsGaHTiG~~hc~~f~~Rl~~--------dp~~d~~~~~~L~~~Cp~~~~~~~~~~~~lD~~Tp~~FDn~Yy  230 (298)
                      |+.+|||+||||||||++||.+|.+||||        ||+|||.|+.+|++.||..++  ..+.+++|+.||.+|||+||
T Consensus       175 l~~~DlVaLsGAHTiG~ahC~~f~~Rlynf~~~~~~~Dp~~d~~~~~~L~~~Cp~~~~--~~~~~~lD~~Tp~~FDn~Yy  252 (324)
T PLN03030        175 LNTQDLVTLVGGHTIGTTACQFFRYRLYNFTTTGNGADPSIDASFVPQLQALCPQNGD--GSRRIALDTGSSNRFDASFF  252 (324)
T ss_pred             CCHHHheeeeeccccceeeeeccccccccccCCCCCCCCchhHHHHHHHhccCCCCCC--CCccccCCCCCCcccccHHH
Confidence            99999999999999999999999999995        899999999999999995322  23467899999999999999


Q ss_pred             HHHHhcccccccccccccCcccHHHHHhhhcCh----hHHHHHHHHHHHHhhcCCCCCCCCCccccCCCCCC
Q 022375          231 KHLLNQKGLLHSDQILFNGGSTDSLVSTYASNS----KTFNSDFAAAMIKMGDISPLTGSIGEIRKNCRRPN  298 (298)
Q Consensus       231 ~~l~~~~gll~SD~~L~~d~~t~~~V~~~A~~~----~~F~~~Fa~Am~Km~~igv~tg~~GeiR~~C~~~N  298 (298)
                      +||++++|+|+|||+|+.|++|+++|++||.|+    +.|+++|++||+|||+|+|+||.+|||||+|+++|
T Consensus       253 ~nll~~rGlL~SDq~L~~d~~T~~~V~~~A~~~~~~~~~F~~~Fa~AmvKMg~i~VlTG~~GEIRk~C~~vN  324 (324)
T PLN03030        253 SNLKNGRGILESDQKLWTDASTRTFVQRFLGVRGLAGLNFNVEFGRSMVKMSNIGVKTGTNGEIRKVCSAIN  324 (324)
T ss_pred             HHHHhcCCCcCCchHhhcCccHHHHHHHHhcccccchhhhHHHHHHHHHHHccCCCCCCCCCceeccccccC
Confidence            999999999999999999999999999999875    59999999999999999999999999999999998

>cd00693 secretory_peroxidase Horseradish peroxidase and related secretory plant peroxidases Back     alignment and domain information
>PLN02608 L-ascorbate peroxidase Back     alignment and domain information
>PF00141 peroxidase: Peroxidase; InterPro: IPR002016 Peroxidases are haem-containing enzymes that use hydrogen peroxide as the electron acceptor to catalyse a number of oxidative reactions Back     alignment and domain information
>cd00691 ascorbate_peroxidase Ascorbate peroxidases and cytochrome C peroxidases Back     alignment and domain information
>PLN02364 L-ascorbate peroxidase 1 Back     alignment and domain information
>cd00692 ligninase Ligninase and other manganese-dependent fungal peroxidases Back     alignment and domain information
>PLN02879 L-ascorbate peroxidase Back     alignment and domain information
>cd00314 plant_peroxidase_like Heme-dependent peroxidases similar to plant peroxidases Back     alignment and domain information
>cd00649 catalase_peroxidase_1 N-terminal catalytic domain of catalase-peroxidases Back     alignment and domain information
>TIGR00198 cat_per_HPI catalase/peroxidase HPI Back     alignment and domain information
>PRK15061 catalase/hydroperoxidase HPI(I); Provisional Back     alignment and domain information
>cd08201 plant_peroxidase_like_1 Uncharacterized family of plant peroxidase-like proteins Back     alignment and domain information
>cd08200 catalase_peroxidase_2 C-terminal non-catalytic domain of catalase-peroxidases Back     alignment and domain information
>COG0376 KatG Catalase (peroxidase I) [Inorganic ion transport and metabolism] Back     alignment and domain information
>TIGR00198 cat_per_HPI catalase/peroxidase HPI Back     alignment and domain information
>PRK15061 catalase/hydroperoxidase HPI(I); Provisional Back     alignment and domain information
>COG0376 KatG Catalase (peroxidase I) [Inorganic ion transport and metabolism] Back     alignment and domain information
>PTZ00411 transaldolase-like protein; Provisional Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query298
1sch_A294 Peanut Peroxidase Length = 294 1e-100
1pa2_A306 Arabidopsis Thaliana Peroxidase A2 Length = 306 2e-74
4a5g_A308 Raphanus Sativus Anionic Peroxidase. Length = 308 1e-68
1qgj_A300 Arabidopsis Thaliana Peroxidase N Length = 300 2e-64
1gx2_A309 Recombinant Horseradish Peroxidase Phe209ser Comple 7e-61
3atj_A309 Heme Ligand Mutant Of Recombinant Horseradish Perox 9e-61
1w4w_A323 Ferric Horseradish Peroxidase C1a In Complex With F 1e-60
6atj_A308 Recombinant Horseradish Peroxidase C Complex With F 1e-60
1atj_A306 Recombinant Horseradish Peroxidase C1a Length = 306 1e-60
2atj_A308 Recombinant Horseradish Peroxidase Complex With Ben 2e-60
1gwo_A309 Recombinant Horseradish Peroxidase C1a Ala170gln Le 2e-60
1gwu_A309 Recombinant Horseradish Peroxidase C1a Ala140gly Le 3e-60
1gw2_A308 Recombinant Horseradish Peroxidase C1a Thr171ser In 4e-60
2ylj_A306 Horse Radish Peroxidase, Mutant S167y Length = 306 6e-60
1fhf_A304 The Structure Of Soybean Peroxidase Length = 304 9e-60
4atj_A309 Distal Heme Pocket Mutant (H42e) Of Recombinant Hor 1e-59
1kzm_A308 Distal Heme Pocket Mutant (r38s/h42e) Of Recombinan 8e-59
1bgp_A309 Crystal Structure Of Barley Grain Peroxidase 1 Leng 1e-48
3hdl_A304 Crystal Structure Of Highly Glycosylated Peroxidase 1e-46
1iyn_A295 Crystal Structure Of Chloroplastic Ascorbate Peroxi 7e-09
1apx_A249 Crystal Structure Of Recombinant Ascorbate Peroxida 1e-08
2cl4_X261 Ascorbate Peroxidase R172a Mutant Length = 261 4e-08
3zcg_A261 Ascorbate Peroxidase W41a-h42c Mutant Length = 261 5e-08
3zch_A261 Ascorbate Peroxidase W41a-h42m Mutant Length = 261 5e-08
2ggn_X261 Conformational Mobility In The Active Site Of A Hem 5e-08
3zcy_A249 Ascorbate Peroxidase W41a-h42y Mutant Length = 249 5e-08
2vcf_X264 Structure Of Isoniazid (Inh) Bound To Cytosolic Soy 6e-08
1oaf_A261 Ascobate Peroxidase From Soybean Cytosol In Complex 6e-08
4ged_A268 Crystal Structure Of The Leishmania Major Peroxidas 6e-08
2vcs_A261 Structure Of Isoniazid (Inh) Bound To Cytosolic Soy 6e-08
2y6a_A249 Ascorbate Peroxidase R38a Mutant Length = 249 6e-08
2xif_A249 The Structure Of Ascorbate Peroxidase Compound Ii L 6e-08
2y6b_A249 Ascorbate Peroxidase R38k Mutant Length = 249 7e-08
3riv_A271 The Crystal Structure Of Leishmania Major Peroxidas 7e-08
3riw_A271 The Crystal Structure Of Leishmania Major Peroxidas 7e-08
1jci_A294 Stabilization Of The Engineered Cation-Binding Loop 9e-04
>pdb|1SCH|A Chain A, Peanut Peroxidase Length = 294 Back     alignment and structure 
Iteration: 1

 Score =  362 bits (929), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 180/296 (60%), Positives = 217/296 (73%), Gaps = 28/296 (9%)
Query: 28  LSTNFYSKTCPKLLNTVKSAVQSAVSKERRMGASLLRLHFHDCFVNGCDGSILLDDTSSF 87
           LS+NFY+  CP  L+T+KSAV SAV+KE RMGASLLRLHFHDCFV GCD S+LLDDTS+F
Sbjct: 2   LSSNFYATKCPNALSTIKSAVNSAVAKEARMGASLLRLHFHDCFVQGCDASVLLDDTSNF 61
Query: 88  TGEKTSGPNINSARGFEVVDDIKSK-------------------------LGGPSWNVKL 122
           TGEKT+GPN NS RGFEV+D IKS+                         LGG SWNV L
Sbjct: 62  TGEKTAGPNANSIRGFEVIDTIKSQVESLCPGVVSCADILAVAARDSVVALGGASWNVLL 121
Query: 123 GRRDSKTASLAAANSGVIPPPTSTLSNLINRFQAKGLSAKDMVALSGAHTIGQARCVAFR 182
           GRRDS TASL++ANS  +P P   LS LI+ F  KG + K++V LSGAHTIGQA+C AFR
Sbjct: 122 GRRDSTTASLSSANSD-LPAPFFNLSGLISAFSNKGFTTKELVTLSGAHTIGQAQCTAFR 180
Query: 183 NRIYNESNIESSFAKNRRGNCPRATGSGDNNLAPLDFQSPNKFDNQYYKHLLNQKGLLHS 242
            RIYNESNI+ ++AK+ + NCP     GD NL+P D  +PNKFDN YY +L N+KGLLHS
Sbjct: 181 TRIYNESNIDPTYAKSLQANCPSV--GGDTNLSPFDVTTPNKFDNAYYINLRNKKGLLHS 238
Query: 243 DQILFNGGSTDSLVSTYASNSKTFNSDFAAAMIKMGDISPLTGSIGEIRKNCRRPN 298
           DQ LFNG STDS V+ Y++N+ TFN+DF  AMIKMG++SPLTG+ G+IR NCR+ N
Sbjct: 239 DQQLFNGVSTDSQVTAYSNNAATFNTDFGNAMIKMGNLSPLTGTSGQIRTNCRKTN 294
>pdb|1PA2|A Chain A, Arabidopsis Thaliana Peroxidase A2 Length = 306 Back     alignment and structure
>pdb|4A5G|A Chain A, Raphanus Sativus Anionic Peroxidase. Length = 308 Back     alignment and structure
>pdb|1QGJ|A Chain A, Arabidopsis Thaliana Peroxidase N Length = 300 Back     alignment and structure
>pdb|1GX2|A Chain A, Recombinant Horseradish Peroxidase Phe209ser Complex With Benzhydroxamic Acid Length = 309 Back     alignment and structure
>pdb|3ATJ|A Chain A, Heme Ligand Mutant Of Recombinant Horseradish Peroxidase In Complex With Benzhydroxamic Acid Length = 309 Back     alignment and structure
>pdb|1W4W|A Chain A, Ferric Horseradish Peroxidase C1a In Complex With Formate Length = 323 Back     alignment and structure
>pdb|6ATJ|A Chain A, Recombinant Horseradish Peroxidase C Complex With Ferulic Acid Length = 308 Back     alignment and structure
>pdb|1ATJ|A Chain A, Recombinant Horseradish Peroxidase C1a Length = 306 Back     alignment and structure
>pdb|2ATJ|A Chain A, Recombinant Horseradish Peroxidase Complex With Benzhydroxamic Acid Length = 308 Back     alignment and structure
>pdb|1GWO|A Chain A, Recombinant Horseradish Peroxidase C1a Ala170gln Length = 309 Back     alignment and structure
>pdb|1GWU|A Chain A, Recombinant Horseradish Peroxidase C1a Ala140gly Length = 309 Back     alignment and structure
>pdb|1GW2|A Chain A, Recombinant Horseradish Peroxidase C1a Thr171ser In Complex With Ferulic Acid Length = 308 Back     alignment and structure
>pdb|2YLJ|A Chain A, Horse Radish Peroxidase, Mutant S167y Length = 306 Back     alignment and structure
>pdb|1FHF|A Chain A, The Structure Of Soybean Peroxidase Length = 304 Back     alignment and structure
>pdb|4ATJ|A Chain A, Distal Heme Pocket Mutant (H42e) Of Recombinant Horseradish Peroxidase In Complex With Benzhydroxamic Acid Length = 309 Back     alignment and structure
>pdb|1KZM|A Chain A, Distal Heme Pocket Mutant (r38s/h42e) Of Recombinant Horseradish Peroxidase C (hrp C) Length = 308 Back     alignment and structure
>pdb|1BGP|A Chain A, Crystal Structure Of Barley Grain Peroxidase 1 Length = 309 Back     alignment and structure
>pdb|3HDL|A Chain A, Crystal Structure Of Highly Glycosylated Peroxidase From Royal Palm Tree Length = 304 Back     alignment and structure
>pdb|1IYN|A Chain A, Crystal Structure Of Chloroplastic Ascorbate Peroxidase From Tobacco Plants And Structural Insights For Its Instability Length = 295 Back     alignment and structure
>pdb|1APX|A Chain A, Crystal Structure Of Recombinant Ascorbate Peroxidase Length = 249 Back     alignment and structure
>pdb|2CL4|X Chain X, Ascorbate Peroxidase R172a Mutant Length = 261 Back     alignment and structure
>pdb|3ZCG|A Chain A, Ascorbate Peroxidase W41a-h42c Mutant Length = 261 Back     alignment and structure
>pdb|3ZCH|A Chain A, Ascorbate Peroxidase W41a-h42m Mutant Length = 261 Back     alignment and structure
>pdb|2GGN|X Chain X, Conformational Mobility In The Active Site Of A Heme Peroxidase Length = 261 Back     alignment and structure
>pdb|3ZCY|A Chain A, Ascorbate Peroxidase W41a-h42y Mutant Length = 249 Back     alignment and structure
>pdb|2VCF|X Chain X, Structure Of Isoniazid (Inh) Bound To Cytosolic Soybean Ascorbate Peroxidase Length = 264 Back     alignment and structure
>pdb|1OAF|A Chain A, Ascobate Peroxidase From Soybean Cytosol In Complex With Ascorbate Length = 261 Back     alignment and structure
>pdb|4GED|A Chain A, Crystal Structure Of The Leishmania Major Peroxidase-Cytochrome C Complex Length = 268 Back     alignment and structure
>pdb|2VCS|A Chain A, Structure Of Isoniazid (Inh) Bound To Cytosolic Soybean Ascorbate Peroxidase Mutant H42a Length = 261 Back     alignment and structure
>pdb|2Y6A|A Chain A, Ascorbate Peroxidase R38a Mutant Length = 249 Back     alignment and structure
>pdb|2XIF|A Chain A, The Structure Of Ascorbate Peroxidase Compound Ii Length = 249 Back     alignment and structure
>pdb|2Y6B|A Chain A, Ascorbate Peroxidase R38k Mutant Length = 249 Back     alignment and structure
>pdb|3RIV|A Chain A, The Crystal Structure Of Leishmania Major Peroxidase Length = 271 Back     alignment and structure
>pdb|3RIW|A Chain A, The Crystal Structure Of Leishmania Major Peroxidase Mutant C197t Length = 271 Back     alignment and structure
>pdb|1JCI|A Chain A, Stabilization Of The Engineered Cation-Binding Loop In Cytochrome C Peroxidase (Ccp) Length = 294 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query298
1sch_A294 PNP, peanut peroxidase, major cationic isozyme; ca 1e-172
3hdl_A304 Royal PALM TREE peroxidase; glycosylated, oxidored 1e-169
1pa2_A306 Peroxidase, ATP A2; oxidoreductase; HET: HEM; 1.45 1e-167
1bgp_A309 Barley grain peroxidase; chromoprotein, oxidoreduc 1e-166
1fhf_A304 SEED coat peroxidase; oxidoreductase; HET: HEM; 2. 1e-166
1gwu_A309 Peroxidase C1A; oxidoreductase, glycoprotein, heme 1e-164
1qgj_A300 Peroxidase N; oxidoreductase; HET: HEM GSH; 1.90A 1e-159
1iyn_A295 Chloroplastic ascorbate peroxidase; hydrogen perox 2e-95
2vcn_A261 Ascorbate peroxidase; INH, APX, isoniazid, oxidore 8e-68
3fmu_A331 VersatIle peroxidase VPL2; class II (fungal) perox 7e-66
3m5q_A357 Manganese peroxidase 1; heme, Mn(II)-binding site, 2e-59
2e39_A344 Peroxidase; heme protein, coordination geometry of 8e-59
1llp_A343 LIP4.15, lignin peroxidase; heme protein, glyco pr 2e-57
3q3u_A338 Lignin peroxidase; oxidoreductase; HET: HEM; 1.85A 7e-56
3riv_A271 Ascorbate peroxidase; alpha helical bundle, heme p 3e-18
3e2o_A294 CCP, cytochrome C peroxidase; cytochrome C peroxid 4e-13
>1sch_A PNP, peanut peroxidase, major cationic isozyme; calcium binding, glycosylation, oxidoreductase; HET: NAG HEM; 2.56A {Arachis hypogaea} SCOP: a.93.1.1 Length = 294 Back     alignment and structure
 Score =  477 bits (1229), Expect = e-172
 Identities = 179/297 (60%), Positives = 218/297 (73%), Gaps = 28/297 (9%)

Query: 27  QLSTNFYSKTCPKLLNTVKSAVQSAVSKERRMGASLLRLHFHDCFVNGCDGSILLDDTSS 86
           +LS+NFY+  CP  L+T+KSAV SAV+KE RMGASLLRLHFHDCFV GCD S+LLDDTS+
Sbjct: 1   ELSSNFYATKCPNALSTIKSAVNSAVAKEARMGASLLRLHFHDCFVQGCDASVLLDDTSN 60

Query: 87  FTGEKTSGPNINSARGFEVVDDIKSKL-------------------------GGPSWNVK 121
           FTGEKT+GPN NS RGFEV+D IKS++                         GG SWNV 
Sbjct: 61  FTGEKTAGPNANSIRGFEVIDTIKSQVESLCPGVVSCADILAVAARDSVVALGGASWNVL 120

Query: 122 LGRRDSKTASLAAANSGVIPPPTSTLSNLINRFQAKGLSAKDMVALSGAHTIGQARCVAF 181
           LGRRDS TASL++ANS  +P P   LS LI+ F  KG + K++V LSGAHTIGQA+C AF
Sbjct: 121 LGRRDSTTASLSSANSD-LPAPFFNLSGLISAFSNKGFTTKELVTLSGAHTIGQAQCTAF 179

Query: 182 RNRIYNESNIESSFAKNRRGNCPRATGSGDNNLAPLDFQSPNKFDNQYYKHLLNQKGLLH 241
           R RIYNESNI+ ++AK+ + NCP     GD NL+P D  +PNKFDN YY +L N+KGLLH
Sbjct: 180 RTRIYNESNIDPTYAKSLQANCPS--VGGDTNLSPFDVTTPNKFDNAYYINLRNKKGLLH 237

Query: 242 SDQILFNGGSTDSLVSTYASNSKTFNSDFAAAMIKMGDISPLTGSIGEIRKNCRRPN 298
           SDQ LFNG STDS V+ Y++N+ TFN+DF  AMIKMG++SPLTG+ G+IR NCR+ N
Sbjct: 238 SDQQLFNGVSTDSQVTAYSNNAATFNTDFGNAMIKMGNLSPLTGTSGQIRTNCRKTN 294
>3hdl_A Royal PALM TREE peroxidase; glycosylated, oxidoreductase; HET: HEM MES NAG FUC MAN; 1.85A {Roystonea regia} Length = 304 Back     alignment and structure
>1pa2_A Peroxidase, ATP A2; oxidoreductase; HET: HEM; 1.45A {Arabidopsis thaliana} SCOP: a.93.1.1 PDB: 1qo4_A* Length = 306 Back     alignment and structure
>1bgp_A Barley grain peroxidase; chromoprotein, oxidoreductase; HET: HEM; 1.90A {Hordeum vulgare} SCOP: a.93.1.1 Length = 309 Back     alignment and structure
>1fhf_A SEED coat peroxidase; oxidoreductase; HET: HEM; 2.80A {Glycine max} SCOP: a.93.1.1 Length = 304 Back     alignment and structure
>1gwu_A Peroxidase C1A; oxidoreductase, glycoprotein, heme, multigene family, signal,; HET: HEM; 1.31A {Armoracia rusticana} SCOP: a.93.1.1 PDB: 1w4w_A* 1w4y_A* 1gwo_A* 2atj_A* 1gwt_A* 3atj_A* 1gx2_A* 7atj_A* 1h55_A* 1h58_A* 1h5a_A* 1h5c_A* 1h5d_A* 1h5e_A* 1h5f_A* 1h57_A* 1h5h_A* 1h5i_A* 1h5j_A* 1h5k_A* ... Length = 309 Back     alignment and structure
>1qgj_A Peroxidase N; oxidoreductase; HET: HEM GSH; 1.90A {Arabidopsis thaliana} SCOP: a.93.1.1 Length = 300 Back     alignment and structure
>1iyn_A Chloroplastic ascorbate peroxidase; hydrogen peroxide, tobacco plant, stromal ascorbate peroxidase, oxidoreductase; HET: HEM; 1.60A {Nicotiana tabacum} SCOP: a.93.1.1 Length = 295 Back     alignment and structure
>2vcn_A Ascorbate peroxidase; INH, APX, isoniazid, oxidoreductase; HET: HEM ISZ; 1.20A {Glycine max} PDB: 2ggn_X* 2ghd_X* 2ghe_X* 2ghc_X* 2vnx_X* 2vnz_X* 2vo2_X* 2wd4_A* 1oaf_A* 1oag_A* 1v0h_X* 2ghh_X* 2ghk_X* 2vcf_X* 2cl4_X* 2vcs_A* 2xi6_A* 2xif_A* 2xih_A* 2xj6_A* ... Length = 261 Back     alignment and structure
>3fmu_A VersatIle peroxidase VPL2; class II (fungal) peroxidases, protoporphyrin IX, electron T lignin peroxidase, lignin degradation; HET: HEM; 1.04A {Pleurotus eryngii} PDB: 3fjw_A* 2boq_A* 3fm1_A* 3fm4_A* 3fm6_A* 3fkg_A* 2w23_A* 2vka_A* Length = 331 Back     alignment and structure
>3m5q_A Manganese peroxidase 1; heme, Mn(II)-binding site, Ca(II)-binding site, glycosylation, ultrahigh resolution, calcium; HET: NAG MAN HEM; 0.93A {Phanerochaete chrysosporium} PDB: 1mnp_A* 1yyg_A* 1yzp_A* 1yzr_A* 1yyd_A* 3m8m_A* 1mn1_A* 1mn2_A* Length = 357 Back     alignment and structure
>2e39_A Peroxidase; heme protein, coordination geometry of heme iron, ARP, perox oxidoreductase; HET: NAG MAN HEM; 1.30A {'arthromyces ramosus'} SCOP: a.93.1.1 PDB: 1arp_A* 1arv_A* 1arw_A* 1arx_A* 1ary_A* 1c8i_A* 1ck6_A* 1gza_A* 1gzb_A* 1hsr_A* 1aru_A* 2e3a_A* 2e3b_A* 1lyk_A* 1lyc_A* 1ly9_A* 1h3j_A* 1ly8_A* Length = 344 Back     alignment and structure
>1llp_A LIP4.15, lignin peroxidase; heme protein, glyco protein,, oxidoreductase; HET: NAG MAN A2G HEM; 1.70A {Phanerochaete chrysosporium} SCOP: a.93.1.1 PDB: 1lga_A* 1b80_A* 1b82_A* 1b85_A* 1qpa_A* Length = 343 Back     alignment and structure
>3q3u_A Lignin peroxidase; oxidoreductase; HET: HEM; 1.85A {Trametes cervina} Length = 338 Back     alignment and structure
>3riv_A Ascorbate peroxidase; alpha helical bundle, heme peroxidase, oxidoreductase; HET: HEM; 1.76A {Leishmania major} PDB: 3riw_A* Length = 271 Back     alignment and structure
>3e2o_A CCP, cytochrome C peroxidase; cytochrome C peroxidase (CCP), heme, hydrogen peroxide, iron, metal-binding, mitochondrion; HET: HEM; 1.06A {Saccharomyces cerevisiae} PDB: 1z53_A* 1kok_A* 1sbm_A* 1sdq_A* 1s73_A* 1zby_A* 1zbz_A* 2b0z_A* 2b10_A* 2b11_A* 2b12_A* 2cyp_A* 2ycg_A* 2v23_A* 1ebe_A* 3r98_A* 3r99_A* 1mkr_A* 1mk8_A* 1mkq_A* ... Length = 294 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query298
3hdl_A304 Royal PALM TREE peroxidase; glycosylated, oxidored 100.0
1sch_A294 PNP, peanut peroxidase, major cationic isozyme; ca 100.0
1fhf_A304 SEED coat peroxidase; oxidoreductase; HET: HEM; 2. 100.0
1pa2_A306 Peroxidase, ATP A2; oxidoreductase; HET: HEM; 1.45 100.0
1gwu_A309 Peroxidase C1A; oxidoreductase, glycoprotein, heme 100.0
1bgp_A309 Barley grain peroxidase; chromoprotein, oxidoreduc 100.0
1qgj_A300 Peroxidase N; oxidoreductase; HET: HEM GSH; 1.90A 100.0
1iyn_A295 Chloroplastic ascorbate peroxidase; hydrogen perox 100.0
2cca_A 740 Peroxidase/catalase T; oxidoreductase, catalase-pe 100.0
1llp_A343 LIP4.15, lignin peroxidase; heme protein, glyco pr 100.0
2e39_A344 Peroxidase; heme protein, coordination geometry of 100.0
1ub2_A 720 Catalase-peroxidase; KATG, cyanobacteria, oxidored 100.0
1itk_A 731 Catalase-peroxidase; heme protein, oxidoreductase; 100.0
2vcn_A261 Ascorbate peroxidase; INH, APX, isoniazid, oxidore 100.0
3fmu_A331 VersatIle peroxidase VPL2; class II (fungal) perox 100.0
3m5q_A357 Manganese peroxidase 1; heme, Mn(II)-binding site, 100.0
3q3u_A338 Lignin peroxidase; oxidoreductase; HET: HEM; 1.85A 100.0
3riv_A271 Ascorbate peroxidase; alpha helical bundle, heme p 100.0
3ut2_A 764 Catalase-peroxidase 2; KATG, fungal, heme enzyme, 100.0
3e2o_A294 CCP, cytochrome C peroxidase; cytochrome C peroxid 100.0
3n3r_A 748 Catalase-peroxidase; E198A variant, tuberclosis, i 100.0
3vli_A 737 Catalase-peroxidase 2; oxidoreductase; HET: HEM; 1 100.0
1u2k_A309 Peroxidase/catalase HPI; KATG, catalase-peroxidase 100.0
1ub2_A720 Catalase-peroxidase; KATG, cyanobacteria, oxidored 100.0
2cca_A740 Peroxidase/catalase T; oxidoreductase, catalase-pe 100.0
1itk_A731 Catalase-peroxidase; heme protein, oxidoreductase; 100.0
3rrw_A268 Thylakoid lumenal 29 kDa protein, chloroplastic; c 100.0
3vli_A737 Catalase-peroxidase 2; oxidoreductase; HET: HEM; 1 100.0
3ut2_A764 Catalase-peroxidase 2; KATG, fungal, heme enzyme, 100.0
3n3r_A748 Catalase-peroxidase; E198A variant, tuberclosis, i 100.0
>3hdl_A Royal PALM TREE peroxidase; glycosylated, oxidoreductase; HET: HEM MES NAG FUC MAN; 1.85A {Roystonea regia} SCOP: a.93.1.0 Back     alignment and structure
Probab=100.00  E-value=1e-98  Score=704.93  Aligned_cols=270  Identities=42%  Similarity=0.690  Sum_probs=258.0

Q ss_pred             cCcccccCCChhHHHHHHHHHHHHHHhCcccccchhheeeccccCcCCCccccccCCCCCCCcCCCCCCCCchhhHHHHH
Q 022375           28 LSTNFYSKTCPKLLNTVKSAVQSAVSKERRMGASLLRLHFHDCFVNGCDGSILLDDTSSFTGEKTSGPNINSARGFEVVD  107 (298)
Q Consensus        28 L~~~fY~~sCP~~e~iV~~~v~~~~~~d~~~aa~llRL~FHDCfv~GCDaSiLl~~~~~~~~Ek~~~~N~~~l~gf~~Id  107 (298)
                      |+++||++|||++|+|||++|++++.+||+++|+|||||||||||+||||||||++++++.+||++++|.+++|||++||
T Consensus         2 L~~~fY~~sCP~~e~iVr~~v~~~~~~d~~~aa~llRL~FHDCfv~GCDgSiLld~t~~~~~Ek~~~~N~~~lrgf~vid   81 (304)
T 3hdl_A            2 LQIGFYNTSCPTAESLVQQAVAAAFANNSGIAPGLIRMHFHDCFVRGCDASVLLDSTANNTAEKDAIPNNPSLRGFEVIT   81 (304)
T ss_dssp             CEETTTTTTCTTHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHHTTTSSSSGGGCCCBTTBCCGGGSTTTTTTCCCHHHHH
T ss_pred             CccChhhCcCcCHHHHHHHHHHHHHHhCCcchHHHHHHheecccCCCCCeeeeecCCCCCcccccCCCcccchHHHHHHH
Confidence            78999999999999999999999999999999999999999999999999999999888889999999987899999999


Q ss_pred             HHHhh-------------------------cCCCceeecccccCCCcccccccCCCCCCCCCCCHHHHHHHHHHCCCChh
Q 022375          108 DIKSK-------------------------LGGPSWNVKLGRRDSKTASLAAANSGVIPPPTSTLSNLINRFQAKGLSAK  162 (298)
Q Consensus       108 ~iK~~-------------------------~GGP~~~v~~GRrD~~~s~~~~~~~~~LP~p~~~~~~l~~~F~~~Gl~~~  162 (298)
                      .||++                         +|||.|+|++||||+++|.+.+++.+ ||+|+.++++|++.|++|||+++
T Consensus        82 ~iK~~le~~Cp~~VScADilalAardav~~~GGP~~~v~~GRrD~~~s~~~~~~~~-lP~p~~~~~~l~~~F~~~Gl~~~  160 (304)
T 3hdl_A           82 AAKSAVEAACPQTVSCADILAFAARDSANLAGNITYQVPSGRRDGTVSLASEANAQ-IPSPLFNATQLINSFANKTLTAD  160 (304)
T ss_dssp             HHHHHHHHHSTTTSCHHHHHHHHHHHHHHHHHCCCCCCEECCCBCSCCCHHHHHHH-SCCTTCCHHHHHHHHHTTTCCHH
T ss_pred             HHHHHHHhhCCCCccHHHHHHHHHhhhhhccCCCccccccCccCCCCCCccccccC-CCCCCCCHHHHHHHHHHcCCCHH
Confidence            99997                         89999999999999999998887777 99999999999999999999999


Q ss_pred             hhHhhhcCccccccccccccccccC-------CCCcCHHHHHHhhccCCCCCCCCCCCCCCCCCCCCCccChHHHHHHHh
Q 022375          163 DMVALSGAHTIGQARCVAFRNRIYN-------ESNIESSFAKNRRGNCPRATGSGDNNLAPLDFQSPNKFDNQYYKHLLN  235 (298)
Q Consensus       163 dlVaLsGaHTiG~~hc~~f~~Rl~~-------dp~~d~~~~~~L~~~Cp~~~~~~~~~~~~lD~~Tp~~FDn~Yy~~l~~  235 (298)
                      ||||||||||||++||.+|.+||||       ||+|||.|++.|+..||.+.+..+++.+++|+.||.+|||+||++|+.
T Consensus       161 d~VaLsGaHTiG~ahC~~f~~Rly~f~~~~~~DP~ld~~~a~~L~~~Cp~~~~~~~~~~~~lD~~TP~~FDN~Yy~nL~~  240 (304)
T 3hdl_A          161 EMVTLSGAHSIGVAHCSSFTNRLYNFNSGSGIDPTLSPSYAALLRNTCPANSTRFTPITVSLDIITPSVLDNMYYTGVQL  240 (304)
T ss_dssp             HHHHHGGGGGSSEEEGGGTGGGTSSCSSSSSSCTTSCHHHHHHHHHHSCTTCCTTSCCEEESCSSSTTSCSTHHHHHHHT
T ss_pred             HhhhhhccccccccccchhhhhhcccCCCCCCCCcccHHHHHHHhccCCCCCCCCCccccCCCCCCcccccHHHHHHHHh
Confidence            9999999999999999999999996       899999999999999997522013456789999999999999999999


Q ss_pred             cccccccccccccCcccHHHHHhhhcChhHHHHHHHHHHHHhhcCCCCCCCCCccccCCCCCC
Q 022375          236 QKGLLHSDQILFNGGSTDSLVSTYASNSKTFNSDFAAAMIKMGDISPLTGSIGEIRKNCRRPN  298 (298)
Q Consensus       236 ~~gll~SD~~L~~d~~t~~~V~~~A~~~~~F~~~Fa~Am~Km~~igv~tg~~GeiR~~C~~~N  298 (298)
                      ++|||+|||+|+.|++|+++|++||.|+++|+++|++||+||++|||+||.+|||||+|++||
T Consensus       241 ~~glL~SDq~L~~d~~t~~~V~~yA~~~~~F~~~Fa~AmvKmg~igv~tg~~GeIR~~C~~~N  303 (304)
T 3hdl_A          241 TLGLLTSDQALVTEANLSAAVKANAMNLTAWASKFAQAMVKMGQIEVLTGTQGEIRTNCSVVN  303 (304)
T ss_dssp             TCCCSHHHHGGGSSHHHHHHHHHHHHCHHHHHHHHHHHHHHHTTTTCCCTTSSBCCSBTTBCC
T ss_pred             CcCCCCCCHHHhcCccHHHHHHHhccCHHHHHHHHHHHHHHHHhcCCCCCCCCeeeCCccccC
Confidence            999999999999999999999999999999999999999999999999999999999999998
>1sch_A PNP, peanut peroxidase, major cationic isozyme; calcium binding, glycosylation, oxidoreductase; HET: NAG HEM; 2.56A {Arachis hypogaea} SCOP: a.93.1.1 Back     alignment and structure
>1fhf_A SEED coat peroxidase; oxidoreductase; HET: HEM; 2.80A {Glycine max} SCOP: a.93.1.1 Back     alignment and structure
>1pa2_A Peroxidase, ATP A2; oxidoreductase; HET: HEM; 1.45A {Arabidopsis thaliana} SCOP: a.93.1.1 PDB: 1qo4_A* Back     alignment and structure
>1gwu_A Peroxidase C1A; oxidoreductase, glycoprotein, heme, multigene family, signal,; HET: HEM; 1.31A {Armoracia rusticana} SCOP: a.93.1.1 PDB: 1w4w_A* 1w4y_A* 1gwo_A* 2atj_A* 1gwt_A* 3atj_A* 1gx2_A* 7atj_A* 1h55_A* 1h58_A* 1h5a_A* 1h5c_A* 1h5d_A* 1h5e_A* 1h5f_A* 1h57_A* 1h5h_A* 1h5i_A* 1h5j_A* 1h5k_A* ... Back     alignment and structure
>1bgp_A Barley grain peroxidase; chromoprotein, oxidoreductase; HET: HEM; 1.90A {Hordeum vulgare} SCOP: a.93.1.1 Back     alignment and structure
>1qgj_A Peroxidase N; oxidoreductase; HET: HEM GSH; 1.90A {Arabidopsis thaliana} SCOP: a.93.1.1 Back     alignment and structure
>1iyn_A Chloroplastic ascorbate peroxidase; hydrogen peroxide, tobacco plant, stromal ascorbate peroxidase, oxidoreductase; HET: HEM; 1.60A {Nicotiana tabacum} SCOP: a.93.1.1 Back     alignment and structure
>2cca_A Peroxidase/catalase T; oxidoreductase, catalase-peroxidase, KATG, heme, hydrogen peroxide, iron, metal-binding, organic radical; HET: HEM; 2.0A {Mycobacterium tuberculosis} SCOP: a.93.1.3 a.93.1.3 PDB: 1sj2_A* 2ccd_A* Back     alignment and structure
>1llp_A LIP4.15, lignin peroxidase; heme protein, glyco protein,, oxidoreductase; HET: NAG MAN A2G HEM; 1.70A {Phanerochaete chrysosporium} SCOP: a.93.1.1 PDB: 1lga_A* 1b80_A* 1b82_A* 1b85_A* 1qpa_A* Back     alignment and structure
>2e39_A Peroxidase; heme protein, coordination geometry of heme iron, ARP, perox oxidoreductase; HET: NAG MAN HEM; 1.30A {'arthromyces ramosus'} SCOP: a.93.1.1 PDB: 1arp_A* 1arv_A* 1arw_A* 1arx_A* 1ary_A* 1c8i_A* 1ck6_A* 1gza_A* 1gzb_A* 1hsr_A* 1aru_A* 2e3a_A* 2e3b_A* 1lyk_A* 1lyc_A* 1ly9_A* 1h3j_A* 1ly8_A* Back     alignment and structure
>1ub2_A Catalase-peroxidase; KATG, cyanobacteria, oxidoreductase; HET: HEM; 2.40A {Synechococcus elongatus} SCOP: a.93.1.3 a.93.1.3 Back     alignment and structure
>1itk_A Catalase-peroxidase; heme protein, oxidoreductase; HET: HEM; 2.00A {Haloarcula marismortui} SCOP: a.93.1.3 a.93.1.3 Back     alignment and structure
>2vcn_A Ascorbate peroxidase; INH, APX, isoniazid, oxidoreductase; HET: HEM ISZ; 1.20A {Glycine max} PDB: 2ggn_X* 2ghd_X* 2ghe_X* 2ghc_X* 2vnx_X* 2vnz_X* 2vo2_X* 2wd4_A* 1oaf_A* 1oag_A* 1v0h_X* 2ghh_X* 2ghk_X* 2vcf_X* 2cl4_X* 2vcs_A* 2xi6_A* 2xif_A* 2xih_A* 2xj6_A* ... Back     alignment and structure
>3fmu_A VersatIle peroxidase VPL2; class II (fungal) peroxidases, protoporphyrin IX, electron T lignin peroxidase, lignin degradation; HET: HEM; 1.04A {Pleurotus eryngii} PDB: 3fjw_A* 2boq_A* 3fm1_A* 3fm4_A* 3fm6_A* 3fkg_A* 2w23_A* 2vka_A* 4fcn_A* 4g05_A* 4fcs_A* 4fef_A* 4fdq_A* Back     alignment and structure
>3m5q_A Manganese peroxidase 1; heme, Mn(II)-binding site, Ca(II)-binding site, glycosylation, ultrahigh resolution, calcium; HET: NAG MAN HEM; 0.93A {Phanerochaete chrysosporium} SCOP: a.93.1.1 PDB: 1mnp_A* 1yyg_A* 1yzp_A* 1yzr_A* 1yyd_A* 3m8m_A* 1mn1_A* 1mn2_A* Back     alignment and structure
>3q3u_A Lignin peroxidase; oxidoreductase; HET: HEM; 1.85A {Trametes cervina} SCOP: a.93.1.0 Back     alignment and structure
>3riv_A Ascorbate peroxidase; alpha helical bundle, heme peroxidase, oxidoreductase; HET: HEM; 1.76A {Leishmania major} PDB: 3riw_A* 4ged_A* Back     alignment and structure
>3ut2_A Catalase-peroxidase 2; KATG, fungal, heme enzyme, oxidoreducta; HET: TOX HEM; 1.55A {Magnaporthe oryzae 70-15} Back     alignment and structure
>3e2o_A CCP, cytochrome C peroxidase; cytochrome C peroxidase (CCP), heme, hydrogen peroxide, iron, metal-binding, mitochondrion; HET: HEM; 1.06A {Saccharomyces cerevisiae} SCOP: a.93.1.1 PDB: 4a71_A* 1z53_A* 1kok_A* 1sbm_A* 1sdq_A* 1s73_A* 1zby_A* 1zbz_A* 2b0z_A* 2b10_A* 2b11_A* 2b12_A* 2cyp_A* 2ycg_A* 4a6z_A* 2v23_A* 1ebe_A* 3r98_A* 3r99_A* 1mkr_A* ... Back     alignment and structure
>3n3r_A Catalase-peroxidase; E198A variant, tuberclosis, isonicotini hydrazide binding, oxidoreductase; HET: TOX HEM; 1.60A {Burkholderia pseudomallei} PDB: 3n3s_A* 3n3o_A* 2fxj_A* 3n3p_A* 2fxg_A* 3n3n_A* 2fxh_A* 2dv2_A* 3n3q_A* 2dv1_A* 1x7u_A* 1mwv_A* 2b2o_A* 2b2q_A* 2b2r_A* 2b2s_A* Back     alignment and structure
>3vli_A Catalase-peroxidase 2; oxidoreductase; HET: HEM; 1.70A {Haloarcula marismortui} PDB: 3vlh_A* 3vlj_A* 3vlk_A* 3vll_A* 3uw8_A* 3vlm_A* 1itk_A* Back     alignment and structure
>1u2k_A Peroxidase/catalase HPI; KATG, catalase-peroxidase, C-terminal domain, oxidoreductase; 2.00A {Escherichia coli} SCOP: a.93.1.3 PDB: 1u2l_A 1u2j_A Back     alignment and structure
>1ub2_A Catalase-peroxidase; KATG, cyanobacteria, oxidoreductase; HET: HEM; 2.40A {Synechococcus elongatus} SCOP: a.93.1.3 a.93.1.3 Back     alignment and structure
>2cca_A Peroxidase/catalase T; oxidoreductase, catalase-peroxidase, KATG, heme, hydrogen peroxide, iron, metal-binding, organic radical; HET: HEM; 2.0A {Mycobacterium tuberculosis} SCOP: a.93.1.3 a.93.1.3 PDB: 1sj2_A* 2ccd_A* Back     alignment and structure
>1itk_A Catalase-peroxidase; heme protein, oxidoreductase; HET: HEM; 2.00A {Haloarcula marismortui} SCOP: a.93.1.3 a.93.1.3 Back     alignment and structure
>3rrw_A Thylakoid lumenal 29 kDa protein, chloroplastic; chloroplast thylakoid lumen, plant protein; 2.50A {Arabidopsis thaliana} Back     alignment and structure
>3vli_A Catalase-peroxidase 2; oxidoreductase; HET: HEM; 1.70A {Haloarcula marismortui} PDB: 3vlh_A* 3vlj_A* 3vlk_A* 3vll_A* 3uw8_A* 3vlm_A* 1itk_A* Back     alignment and structure
>3ut2_A Catalase-peroxidase 2; KATG, fungal, heme enzyme, oxidoreducta; HET: TOX HEM; 1.55A {Magnaporthe oryzae 70-15} Back     alignment and structure
>3n3r_A Catalase-peroxidase; E198A variant, tuberclosis, isonicotini hydrazide binding, oxidoreductase; HET: TOX HEM; 1.60A {Burkholderia pseudomallei} PDB: 3n3s_A* 3n3o_A* 2fxj_A* 3n3p_A* 2fxg_A* 3n3n_A* 2fxh_A* 2dv2_A* 3n3q_A* 2dv1_A* 1x7u_A* 1mwv_A* 2b2o_A* 2b2q_A* 2b2r_A* 2b2s_A* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 298
d1scha_294 a.93.1.1 (A:) Plant peroxidase {Peanut (Arachis hy 1e-110
d1fhfa_304 a.93.1.1 (A:) Plant peroxidase {Soybean (Glycine m 1e-110
d1pa2a_306 a.93.1.1 (A:) Plant peroxidase {Mouse-ear cress (A 1e-108
d1bgpa_309 a.93.1.1 (A:) Plant peroxidase {Barley (Hordeum vu 1e-105
d1qgja_300 a.93.1.1 (A:) Plant peroxidase {Mouse-ear cress (A 1e-103
d1gwua_307 a.93.1.1 (A:) Plant peroxidase {Horseradish (Armor 1e-102
d2e39a1336 a.93.1.1 (A:9-344) Fungal peroxidase (ligninase) { 2e-61
d1llpa_343 a.93.1.1 (A:) Fungal peroxidase (ligninase) {White 9e-59
d1yyda1357 a.93.1.1 (A:1-357) Fungal peroxidase (ligninase) { 5e-56
d1iyna_275 a.93.1.1 (A:) Ascorbate peroxidase {Common tobacco 4e-45
d1oafa_250 a.93.1.1 (A:) Ascorbate peroxidase {Soybean (Glyci 3e-39
d2euta1291 a.93.1.1 (A:4-294) Cytochrome c peroxidase, CCP {B 3e-37
d2ccaa1410 a.93.1.3 (A:26-435) Catalase-peroxidase KatG {Myco 1e-06
d1mwva1406 a.93.1.3 (A:35-440) Catalase-peroxidase KatG {Burk 9e-06
d1ub2a2294 a.93.1.3 (A:427-720) Catalase-peroxidase KatG {Syn 7e-04
>d1scha_ a.93.1.1 (A:) Plant peroxidase {Peanut (Arachis hypogaea) [TaxId: 3818]} Length = 294 Back     information, alignment and structure

class: All alpha proteins
fold: Heme-dependent peroxidases
superfamily: Heme-dependent peroxidases
family: CCP-like
domain: Plant peroxidase
species: Peanut (Arachis hypogaea) [TaxId: 3818]

 Score =  318 bits (815), Expect = e-110
 Identities = 178/297 (59%), Positives = 217/297 (73%), Gaps = 28/297 (9%)

Query: 27  QLSTNFYSKTCPKLLNTVKSAVQSAVSKERRMGASLLRLHFHDCFVNGCDGSILLDDTSS 86
           +LS+NFY+  CP  L+T+KSAV SAV+KE RMGASLLRLHFHDCFV GCD S+LLDDTS+
Sbjct: 1   ELSSNFYATKCPNALSTIKSAVNSAVAKEARMGASLLRLHFHDCFVQGCDASVLLDDTSN 60

Query: 87  FTGEKTSGPNINSARGFEVVDDIKSKL-------------------------GGPSWNVK 121
           FTGEKT+GPN NS RGFEV+D IKS++                         GG SWNV 
Sbjct: 61  FTGEKTAGPNANSIRGFEVIDTIKSQVESLCPGVVSCADILAVAARDSVVALGGASWNVL 120

Query: 122 LGRRDSKTASLAAANSGVIPPPTSTLSNLINRFQAKGLSAKDMVALSGAHTIGQARCVAF 181
           LGRRDS TASL++AN   +P P   LS LI+ F  KG + K++V LSGAHTIGQA+C AF
Sbjct: 121 LGRRDSTTASLSSAN-SDLPAPFFNLSGLISAFSNKGFTTKELVTLSGAHTIGQAQCTAF 179

Query: 182 RNRIYNESNIESSFAKNRRGNCPRATGSGDNNLAPLDFQSPNKFDNQYYKHLLNQKGLLH 241
           R RIYNESNI+ ++AK+ + NCP     GD NL+P D  +PNKFDN YY +L N+KGLLH
Sbjct: 180 RTRIYNESNIDPTYAKSLQANCPSV--GGDTNLSPFDVTTPNKFDNAYYINLRNKKGLLH 237

Query: 242 SDQILFNGGSTDSLVSTYASNSKTFNSDFAAAMIKMGDISPLTGSIGEIRKNCRRPN 298
           SDQ LFNG STDS V+ Y++N+ TFN+DF  AMIKMG++SPLTG+ G+IR NCR+ N
Sbjct: 238 SDQQLFNGVSTDSQVTAYSNNAATFNTDFGNAMIKMGNLSPLTGTSGQIRTNCRKTN 294
>d1fhfa_ a.93.1.1 (A:) Plant peroxidase {Soybean (Glycine max) [TaxId: 3847]} Length = 304 Back     information, alignment and structure
>d1pa2a_ a.93.1.1 (A:) Plant peroxidase {Mouse-ear cress (Arabidopsis thaliana), peroxidase A2 [TaxId: 3702]} Length = 306 Back     information, alignment and structure
>d1bgpa_ a.93.1.1 (A:) Plant peroxidase {Barley (Hordeum vulgare), peroxidase 1 [TaxId: 4513]} Length = 309 Back     information, alignment and structure
>d1qgja_ a.93.1.1 (A:) Plant peroxidase {Mouse-ear cress (Arabidopsis thaliana), peroxidase N [TaxId: 3702]} Length = 300 Back     information, alignment and structure
>d1gwua_ a.93.1.1 (A:) Plant peroxidase {Horseradish (Armoracia rusticana) [TaxId: 3704]} Length = 307 Back     information, alignment and structure
>d2e39a1 a.93.1.1 (A:9-344) Fungal peroxidase (ligninase) {Arthromyces ramosus [TaxId: 5451]} Length = 336 Back     information, alignment and structure
>d1llpa_ a.93.1.1 (A:) Fungal peroxidase (ligninase) {White rot basidiomycete (Phanerochaete chrysosporium) [TaxId: 5306]} Length = 343 Back     information, alignment and structure
>d1yyda1 a.93.1.1 (A:1-357) Fungal peroxidase (ligninase) {Basidomycetos fungus (Phanerochaete chrysosporium) [TaxId: 5306]} Length = 357 Back     information, alignment and structure
>d1iyna_ a.93.1.1 (A:) Ascorbate peroxidase {Common tobacco (Nicotiana tabacum) [TaxId: 4097]} Length = 275 Back     information, alignment and structure
>d1oafa_ a.93.1.1 (A:) Ascorbate peroxidase {Soybean (Glycine max) [TaxId: 3847]} Length = 250 Back     information, alignment and structure
>d2euta1 a.93.1.1 (A:4-294) Cytochrome c peroxidase, CCP {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 291 Back     information, alignment and structure
>d2ccaa1 a.93.1.3 (A:26-435) Catalase-peroxidase KatG {Mycobacterium tuberculosis [TaxId: 1773]} Length = 410 Back     information, alignment and structure
>d1mwva1 a.93.1.3 (A:35-440) Catalase-peroxidase KatG {Burkholderia pseudomallei [TaxId: 28450]} Length = 406 Back     information, alignment and structure
>d1ub2a2 a.93.1.3 (A:427-720) Catalase-peroxidase KatG {Synechococcus sp. pcc 7942 [TaxId: 1140]} Length = 294 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query298
d1fhfa_304 Plant peroxidase {Soybean (Glycine max) [TaxId: 38 100.0
d1pa2a_306 Plant peroxidase {Mouse-ear cress (Arabidopsis tha 100.0
d1bgpa_309 Plant peroxidase {Barley (Hordeum vulgare), peroxi 100.0
d1scha_294 Plant peroxidase {Peanut (Arachis hypogaea) [TaxId 100.0
d1qgja_300 Plant peroxidase {Mouse-ear cress (Arabidopsis tha 100.0
d1gwua_307 Plant peroxidase {Horseradish (Armoracia rusticana 100.0
d1iyna_275 Ascorbate peroxidase {Common tobacco (Nicotiana ta 100.0
d1yyda1357 Fungal peroxidase (ligninase) {Basidomycetos fungu 100.0
d2e39a1336 Fungal peroxidase (ligninase) {Arthromyces ramosus 100.0
d1llpa_343 Fungal peroxidase (ligninase) {White rot basidiomy 100.0
d1oafa_250 Ascorbate peroxidase {Soybean (Glycine max) [TaxId 100.0
d2euta1291 Cytochrome c peroxidase, CCP {Baker's yeast (Sacch 100.0
d1mwva2308 Catalase-peroxidase KatG {Burkholderia pseudomalle 99.97
d1itka1406 Catalase-peroxidase KatG {Archaeon Haloarcula mari 99.97
d1ub2a2294 Catalase-peroxidase KatG {Synechococcus sp. pcc 79 99.97
d1mwva1406 Catalase-peroxidase KatG {Burkholderia pseudomalle 99.97
d1u2ka_292 Catalase-peroxidase KatG {Burkholderia pseudomalle 99.97
d2ccaa1410 Catalase-peroxidase KatG {Mycobacterium tuberculos 99.96
d1itka2308 Catalase-peroxidase KatG {Archaeon Haloarcula mari 99.96
d1ub2a1406 Catalase-peroxidase KatG {Synechococcus sp. pcc 79 99.95
d2ccaa2285 Catalase-peroxidase KatG {Mycobacterium tuberculos 99.91
>d1fhfa_ a.93.1.1 (A:) Plant peroxidase {Soybean (Glycine max) [TaxId: 3847]} Back     information, alignment and structure
class: All alpha proteins
fold: Heme-dependent peroxidases
superfamily: Heme-dependent peroxidases
family: CCP-like
domain: Plant peroxidase
species: Soybean (Glycine max) [TaxId: 3847]

Probab=100.00  E-value=6e-94  Score=672.39  Aligned_cols=269  Identities=48%  Similarity=0.857  Sum_probs=258.7

Q ss_pred             CcCcccccCCChhHHHHHHHHHHHHHHhCcccccchhheeeccccCcCCCccccccCCCCCCCcCCCCCCCCchhhHHHH
Q 022375           27 QLSTNFYSKTCPKLLNTVKSAVQSAVSKERRMGASLLRLHFHDCFVNGCDGSILLDDTSSFTGEKTSGPNINSARGFEVV  106 (298)
Q Consensus        27 ~L~~~fY~~sCP~~e~iV~~~v~~~~~~d~~~aa~llRL~FHDCfv~GCDaSiLl~~~~~~~~Ek~~~~N~~~l~gf~~I  106 (298)
                      ||+.+||++|||++|+||+++|++.+.+||+++|+||||+||||||+||||||||++++++.+|+++++|.++++||++|
T Consensus         1 qL~~~~Y~~sCp~~e~iV~~~v~~~~~~d~~~aa~llRL~FHDCfv~GCDgSill~~~~~~~~E~~~~~N~~~~~g~~~i   80 (304)
T d1fhfa_           1 QLTPTFYRETCPNLFPIVFGVIFDASFTDPRIGASLMRLHFHDCFVQGCDGSVLLNNTDTIESEQDALPNINSIRGLDVV   80 (304)
T ss_dssp             CCBTTTTTTTSTTHHHHHHHHHHHTTSSCTTHHHHHHHHHHHHHTTTCSSSGGGCCCCSSCCCGGGSTTTTTTCCCHHHH
T ss_pred             CCCCccccccCcCHHHHHHHHHHHHHHhCCchhHHHHHHHHHhhccCCCCeeEeecCCCCccccccCCcccccchhHHHH
Confidence            79999999999999999999999999999999999999999999999999999999988888999999999788999999


Q ss_pred             HHHHhh-------------------------cCCCceeecccccCCCcccccccCCCCCCCCCCCHHHHHHHHHHCCCCh
Q 022375          107 DDIKSK-------------------------LGGPSWNVKLGRRDSKTASLAAANSGVIPPPTSTLSNLINRFQAKGLSA  161 (298)
Q Consensus       107 d~iK~~-------------------------~GGP~~~v~~GRrD~~~s~~~~~~~~~LP~p~~~~~~l~~~F~~~Gl~~  161 (298)
                      |.||++                         +|||.|+|++||+|+++|++.++..+ ||.|+.++++|++.|++||||.
T Consensus        81 d~iK~~le~~cp~~VScADIlalAardAv~~~GGP~~~v~~GR~D~~~s~~~~~~~~-lP~p~~~~~~l~~~F~~~Gl~~  159 (304)
T d1fhfa_          81 NDIKTAVENSCPDTVSCADILAIAAEIASVLGGGPGWPVPLGRRDSLTANRTLANQN-LPAPFFNLTQLKASFAVQGLNT  159 (304)
T ss_dssp             HHHHHHHHTTSTTTSCHHHHHHHHHHHHHHTTTCCCCCCCBCCCBCSCCCHHHHHHH-SCCTTCCHHHHHHHHHHTTCCH
T ss_pred             HHHHHHHHhhCCCccCHHHHHHHHHhhhhhhcCCCcccccCCCcCcCcccccccccc-CCCCCCCHHHHHHHHHHcCCCH
Confidence            999987                         89999999999999999998877777 9999999999999999999999


Q ss_pred             hhhHhhhcCccccccccccccccccC-------CCCcCHHHHHHhhccCCCCCCCCCCCCCCCCCCCCCccChHHHHHHH
Q 022375          162 KDMVALSGAHTIGQARCVAFRNRIYN-------ESNIESSFAKNRRGNCPRATGSGDNNLAPLDFQSPNKFDNQYYKHLL  234 (298)
Q Consensus       162 ~dlVaLsGaHTiG~~hc~~f~~Rl~~-------dp~~d~~~~~~L~~~Cp~~~~~~~~~~~~lD~~Tp~~FDn~Yy~~l~  234 (298)
                      +||||||||||||++||.+|..|+|+       ||.+|+.|+..|+..||.++.  ..+.+++|+.||.+|||+||++++
T Consensus       160 ~d~VaLsGaHTiG~ahc~~~~~rl~~~~~~~~~d~~~~~~~~~~L~~~c~~~~~--~~~~~~~d~~tp~~fDn~Yy~~l~  237 (304)
T d1fhfa_         160 LDLVTLSGGHTFGRARCSTFINRLYNFSNTGNPDPTLNTTYLEVLRARCPQNAT--GDNLTNLDLSTPDQFDNRYYSNLL  237 (304)
T ss_dssp             HHHHHHGGGGGSCEEEGGGTGGGTSCGGGSSSCCTTSCHHHHHHHHHHSCSSCS--SCCEEESCSSSTTSCSTHHHHHHH
T ss_pred             HHHHHHhhhhhhcccccccccccccCCCCCCCCCcccCHHHHHHHHHhcCCCCC--CCcccccCCCCCCccccHHHHHHh
Confidence            99999999999999999999999995       899999999999999997644  556788999999999999999999


Q ss_pred             hcccccccccccccCc--ccHHHHHhhhcChhHHHHHHHHHHHHhhcCCCCCCCCCccccCCCCCC
Q 022375          235 NQKGLLHSDQILFNGG--STDSLVSTYASNSKTFNSDFAAAMIKMGDISPLTGSIGEIRKNCRRPN  298 (298)
Q Consensus       235 ~~~gll~SD~~L~~d~--~t~~~V~~~A~~~~~F~~~Fa~Am~Km~~igv~tg~~GeiR~~C~~~N  298 (298)
                      .++|+|+||++|+.||  +|+++|++||.|+++|+++|++||+||++||||||.+|||||+|+++|
T Consensus       238 ~~~glL~SD~~L~~dp~~~t~~~V~~yA~d~~~F~~~F~~Am~Km~~lgv~tg~~GeiR~~C~~~N  303 (304)
T d1fhfa_         238 QLNGLLQSDQELFSTPGADTIPIVNSFSSNQNTFFSNFRVSMIKMGNIGVLTGDEGEIRLQCNFVN  303 (304)
T ss_dssp             TTCCSSHHHHTTTSSTTCSSHHHHHHHHHCHHHHHHHHHHHHHHHTTTTCCCTTSSBCCSBTTBCC
T ss_pred             hcCcccHhhHHHHhCCCchHHHHHHHHhhCHHHHHHHHHHHHHHHhcCCCCCCCCCcccCcccCcC
Confidence            9999999999999997  799999999999999999999999999999999999999999999998
>d1pa2a_ a.93.1.1 (A:) Plant peroxidase {Mouse-ear cress (Arabidopsis thaliana), peroxidase A2 [TaxId: 3702]} Back     information, alignment and structure
>d1bgpa_ a.93.1.1 (A:) Plant peroxidase {Barley (Hordeum vulgare), peroxidase 1 [TaxId: 4513]} Back     information, alignment and structure
>d1scha_ a.93.1.1 (A:) Plant peroxidase {Peanut (Arachis hypogaea) [TaxId: 3818]} Back     information, alignment and structure
>d1qgja_ a.93.1.1 (A:) Plant peroxidase {Mouse-ear cress (Arabidopsis thaliana), peroxidase N [TaxId: 3702]} Back     information, alignment and structure
>d1gwua_ a.93.1.1 (A:) Plant peroxidase {Horseradish (Armoracia rusticana) [TaxId: 3704]} Back     information, alignment and structure
>d1iyna_ a.93.1.1 (A:) Ascorbate peroxidase {Common tobacco (Nicotiana tabacum) [TaxId: 4097]} Back     information, alignment and structure
>d1yyda1 a.93.1.1 (A:1-357) Fungal peroxidase (ligninase) {Basidomycetos fungus (Phanerochaete chrysosporium) [TaxId: 5306]} Back     information, alignment and structure
>d2e39a1 a.93.1.1 (A:9-344) Fungal peroxidase (ligninase) {Arthromyces ramosus [TaxId: 5451]} Back     information, alignment and structure
>d1llpa_ a.93.1.1 (A:) Fungal peroxidase (ligninase) {White rot basidiomycete (Phanerochaete chrysosporium) [TaxId: 5306]} Back     information, alignment and structure
>d1oafa_ a.93.1.1 (A:) Ascorbate peroxidase {Soybean (Glycine max) [TaxId: 3847]} Back     information, alignment and structure
>d2euta1 a.93.1.1 (A:4-294) Cytochrome c peroxidase, CCP {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1mwva2 a.93.1.3 (A:441-748) Catalase-peroxidase KatG {Burkholderia pseudomallei [TaxId: 28450]} Back     information, alignment and structure
>d1itka1 a.93.1.3 (A:18-423) Catalase-peroxidase KatG {Archaeon Haloarcula marismortui [TaxId: 2238]} Back     information, alignment and structure
>d1ub2a2 a.93.1.3 (A:427-720) Catalase-peroxidase KatG {Synechococcus sp. pcc 7942 [TaxId: 1140]} Back     information, alignment and structure
>d1mwva1 a.93.1.3 (A:35-440) Catalase-peroxidase KatG {Burkholderia pseudomallei [TaxId: 28450]} Back     information, alignment and structure
>d1u2ka_ a.93.1.3 (A:) Catalase-peroxidase KatG {Burkholderia pseudomallei [TaxId: 28450]} Back     information, alignment and structure
>d2ccaa1 a.93.1.3 (A:26-435) Catalase-peroxidase KatG {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure
>d1itka2 a.93.1.3 (A:424-731) Catalase-peroxidase KatG {Archaeon Haloarcula marismortui [TaxId: 2238]} Back     information, alignment and structure
>d1ub2a1 a.93.1.3 (A:21-426) Catalase-peroxidase KatG {Synechococcus sp. pcc 7942 [TaxId: 1140]} Back     information, alignment and structure
>d2ccaa2 a.93.1.3 (A:436-720) Catalase-peroxidase KatG {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure