Citrus Sinensis ID: 022376

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------30
MYHSLVEDYFTGFKQLHCKGWRSVYLNPERPQFLGTSTTNLNDSLVQGTRWSSGLVQVAISKYCPLIYGPPRMSLLESMAYADLGMFPLLNCLPLWCFATVPQLCLLHGIPLYPEVLSSSSPIFVFVFLSALSKHLYEVLSTGGSIKIWRNEQRIWMIRAVTCQLYGSLNAIMHKLGLAEASFSATNKVADDEQVKLYGMGKFDFRTSKMFLAPLVTIILLNIAAFVCGAIRSTIITGDWDKMFVQISLSFYILVMNYAIIEGMIVRKDNGRIPPSVTLSSALLSGIFLPLVSIILRH
ccccccccHHHHHHHHHHccccEEEcccccccccccccccHHHHHHHHHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHHHccccccEEEcccccccHHHHHccccEEEEEcccccHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHc
cccccHHHHHHHHHHHHHcccEEEEEccccccccccccccHHHHHHHHHHHHHccEEEEEcccccEEEcccccHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHcccEEcccccHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHcccEEEEccHHHHHHHHHHHHHHHHHcccEEEEEEEcccccccccHHHHHHHEEccccccHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHccc
MYHSLVEDYFTGFkqlhckgwrsvylnperpqflgtsttnlndslvqgtrwsSGLVQVAISKycpliygpprmslLESMAyadlgmfpllnclplwcfatvpqlcllhgiplypevlsssspIFVFVFLSALSKHLYEVLSTGGSIKIWRNEQRIWMIRAVTCQLYGSLNAIMHKLGLAeasfsatnkvaddeqvklygmgkfdfrtskmflAPLVTIILLNIAAFVCGAIrstiitgdwdKMFVQISLSFYILVMNYAIIEGMIvrkdngrippsvTLSSALLSGIFLPLVSIILRH
MYHSLVEDYFTGFKQLHCKGWRSVYLNPERPQFLGTSTTNLNDSLVQGTRWSSGLVQVAISKYCPLIYGPPRMSLLESMAYADLGMFPLLNCLPLWCFATVPQLCLLHGIPLYPEVLSSSSPIFVFVFLSALSKHLYEVLSTggsikiwrnEQRIWMIRAVTCQLYGSLNAIMHKLGLAEASFSATNKVADDEQVKLYGMGKFDFRTSKMFLAPLVTIILLNIAAFVCGAIRSTIITGDWDKMFVQISLSFYILVMNYAIIEGMIVRKDNGRIPPSVTLssallsgiflPLVSIILRH
MYHSLVEDYFTGFKQLHCKGWRSVYLNPERPQFLGTSTTNLNDSLVQGTRWSSGLVQVAISKYCPLIYGPPRMSLLESMAYADLGMFPLLNCLPLWCFATVPQLCLLHGIPLYPEVLSSSSPIFVFVFLSALSKHLYEVLSTGGSIKIWRNEQRIWMIRAVTCQLYGSLNAIMHKLGLAEASFSATNKVADDEQVKLYGMGKFDFRTSKMFLAPLVTIILLNIAAFVCGAIRSTIITGDWDKMFVQISLSFYILVMNYAIIEGMIVRKDNGRIPPSVTLSSALLSGIFLPLVSIILRH
****LVEDYFTGFKQLHCKGWRSVYLNPERPQFLGTSTTNLNDSLVQGTRWSSGLVQVAISKYCPLIYGPPRMSLLESMAYADLGMFPLLNCLPLWCFATVPQLCLLHGIPLYPEVLSSSSPIFVFVFLSALSKHLYEVLSTGGSIKIWRNEQRIWMIRAVTCQLYGSLNAIMHKLGLAEASFSATNKVADDEQVKLYGMGKFDFRTSKMFLAPLVTIILLNIAAFVCGAIRSTIITGDWDKMFVQISLSFYILVMNYAIIEGMIVRKDNGRIPPSVTLSSALLSGIFLPLVSIIL**
MYHSLVEDYFTGFKQLHCKGWRSVYLNPERPQFLGTSTTNLNDSLVQGTRWSSGLVQVAISKYCPLIYGPPRMSLLESMAYADLGMFPLLNCLPLWCFATVPQLCLLHGIPLYPEVLSSSSPIFVFVFLSALSKHLYEVLSTGGSIKIWRNEQRIWMIRAVTCQLYGSLNAIMHKLGLAEASFSATNKVAD*EQVKLYGMGKFDFRTSKMFLAPLVTIILLNIAAFVCGAIRSTIITGDWDKMFVQISLSFYILVMNYAIIEGMIVRKDNGRIPPSVTLSSALLSGIFLPLVSIILRH
MYHSLVEDYFTGFKQLHCKGWRSVYLNPERPQFLGTSTTNLNDSLVQGTRWSSGLVQVAISKYCPLIYGPPRMSLLESMAYADLGMFPLLNCLPLWCFATVPQLCLLHGIPLYPEVLSSSSPIFVFVFLSALSKHLYEVLSTGGSIKIWRNEQRIWMIRAVTCQLYGSLNAIMHKLGLAEASFSATNKVADDEQVKLYGMGKFDFRTSKMFLAPLVTIILLNIAAFVCGAIRSTIITGDWDKMFVQISLSFYILVMNYAIIEGMIVRKDNGRIPPSVTLSSALLSGIFLPLVSIILRH
MYHSLVEDYFTGFKQLHCKGWRSVYLNPERPQFLGTSTTNLNDSLVQGTRWSSGLVQVAISKYCPLIYGPPRMSLLESMAYADLGMFPLLNCLPLWCFATVPQLCLLHGIPLYPEVLSSSSPIFVFVFLSALSKHLYEVLSTGGSIKIWRNEQRIWMIRAVTCQLYGSLNAIMHKLGLAEASFSATNKVADDEQVKLYGMGKFDFRTSKMFLAPLVTIILLNIAAFVCGAIRSTIITGDWDKMFVQISLSFYILVMNYAIIEGMIVRKDNGRIPPSVTLSSALLSGIFLPLVSIILRH
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ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoo
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iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooooooooooHHHHHHHHHHHHHHHHHHHHiii
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MYHSLVEDYFTGFKQLHCKGWRSVYLNPERPQFLGTSTTNLNDSLVQGTRWSSGLVQVAISKYCPLIYGPPRMSLLESMAYADLGMFPLLNCLPLWCFATVPQLCLLHGIPLYPEVLSSSSPIFVFVFLSALSKHLYEVLSTGGSIKIWRNEQRIWMIRAVTCQLYGSLNAIMHKLGLAEASFSATNKVADDEQVKLYGMGKFDFRTSKMFLAPLVTIILLNIAAFVCGAIRSTIITGDWDKMFVQISLSFYILVMNYAIIEGMIVRKDNGRIPPSVTLSSALLSGIFLPLVSIILRH
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query298 2.2.26 [Sep-21-2011]
Q651X6728 Cellulose synthase-like p yes no 0.963 0.394 0.368 7e-48
Q8VYR4722 Cellulose synthase-like p yes no 0.932 0.385 0.360 2e-46
Q651X7737 Cellulose synthase-like p yes no 0.919 0.371 0.352 3e-46
Q0DXZ1745 Cellulose synthase-like p no no 0.932 0.373 0.358 3e-43
Q0WVN5751 Cellulose synthase-like p no no 0.939 0.372 0.345 6e-43
Q570S7760 Cellulose synthase-like p no no 0.895 0.351 0.347 3e-42
Q8VZK9729 Cellulose synthase-like p no no 0.942 0.385 0.374 2e-40
Q84JA61049 Cellulose synthase A cata no no 0.932 0.265 0.344 9e-39
Q9AV711063 Cellulose synthase A cata no no 0.942 0.264 0.331 1e-38
Q69P511055 Cellulose synthase A cata no no 0.939 0.265 0.325 6e-38
>sp|Q651X6|CSLE6_ORYSJ Cellulose synthase-like protein E6 OS=Oryza sativa subsp. japonica GN=CSLE6 PE=2 SV=1 Back     alignment and function desciption
 Score =  191 bits (484), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 108/293 (36%), Positives = 162/293 (55%), Gaps = 6/293 (2%)

Query: 2   YHSLVEDYFTGFKQLHCKGWRSVYLNPERPQFLGTSTTNLNDSLVQGTRWSSGLVQVAIS 61
           Y   VED  TG   +HC+GW SVY+ P+R  F+G +   L  +++Q  RWS G   + +S
Sbjct: 440 YGCPVEDVITGL-AIHCRGWESVYMEPQRAAFVGVAPATLAQTILQHKRWSEGNFTIFLS 498

Query: 62  KYCPLIYGPPRMSLLESMAYADLGMFPLLNCLPLWCFATVPQLCLLHGIPLYPEVLSSSS 121
           K+   ++G  ++SL   M Y   G++   N LP   +  +P L L+ G PL+PE++S  +
Sbjct: 499 KHNTFLFGHGKISLQLQMGYCIYGLWAA-NSLPTIYYVMIPALGLVKGTPLFPEIMSPWA 557

Query: 122 PIFVFVFLSALSKHLYEVLSTGGSIKIWRNEQRIWMIRAVTCQLYGSLNAIMHKLGLAEA 181
             F++VF       LYE L +G ++K W N QR+WM++ +T  LYG ++ I   LGL++ 
Sbjct: 558 TPFIYVFCVKTLYSLYEALLSGDTLKGWWNGQRMWMVKRITSYLYGFIDTIRKLLGLSKM 617

Query: 182 SFSATNKVADDEQVKLYGMGKFDFRTSKMFLAPLVTIILLNIAAFVCGAIRSTIITGDWD 241
           SF  T KV+D ++ K Y     +F +S      + T+ LLN    V G   S I+ G W+
Sbjct: 618 SFEITAKVSDGDEAKRYEQEILEFGSSSPEFVIIATVALLNFVCLVAGL--SKIMAGVWN 675

Query: 242 KMFVQISLSFYILVMNYAIIEGMIVRKDNGRIPPSVTLSSA--LLSGIFLPLV 292
               Q+ L   I++ N  I E M VRKD GRIP  VTL+S   ++    LP+V
Sbjct: 676 VFLPQVILCGLIVITNIPIYEAMFVRKDKGRIPLPVTLASIGFVMLAFLLPIV 728
Thought to be a Golgi-localized beta-glycan synthase that polymerize the backbones of noncellulosic polysaccharides (hemicelluloses) of plant cell wall.
Oryza sativa subsp. japonica (taxid: 39947)
EC: 2EC: .EC: 4EC: .EC: 1EC: .EC: -
>sp|Q8VYR4|CSLG2_ARATH Cellulose synthase-like protein G2 OS=Arabidopsis thaliana GN=CSLG2 PE=2 SV=1 Back     alignment and function description
>sp|Q651X7|CSLE1_ORYSJ Cellulose synthase-like protein E1 OS=Oryza sativa subsp. japonica GN=CSLE1 PE=2 SV=2 Back     alignment and function description
>sp|Q0DXZ1|CSLE2_ORYSJ Cellulose synthase-like protein E2 OS=Oryza sativa subsp. japonica GN=CSLE2 PE=2 SV=1 Back     alignment and function description
>sp|Q0WVN5|CSLG3_ARATH Cellulose synthase-like protein G3 OS=Arabidopsis thaliana GN=CSLG3 PE=2 SV=2 Back     alignment and function description
>sp|Q570S7|CSLG1_ARATH Cellulose synthase-like protein G1 OS=Arabidopsis thaliana GN=CSLG1 PE=2 SV=1 Back     alignment and function description
>sp|Q8VZK9|CSLE1_ARATH Cellulose synthase-like protein E1 OS=Arabidopsis thaliana GN=CSLE1 PE=1 SV=1 Back     alignment and function description
>sp|Q84JA6|CESA4_ARATH Cellulose synthase A catalytic subunit 4 [UDP-forming] OS=Arabidopsis thaliana GN=CESA4 PE=1 SV=1 Back     alignment and function description
>sp|Q9AV71|CESA7_ORYSJ Cellulose synthase A catalytic subunit 7 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA7 PE=2 SV=1 Back     alignment and function description
>sp|Q69P51|CESA9_ORYSJ Cellulose synthase A catalytic subunit 9 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA9 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query298
297737188 822 unnamed protein product [Vitis vinifera] 0.983 0.356 0.621 1e-103
359477392 678 PREDICTED: cellulose synthase-like prote 0.983 0.432 0.621 1e-103
147785659 643 hypothetical protein VITISV_002996 [Viti 0.983 0.455 0.618 1e-102
224111028 857 predicted protein [Populus trichocarpa] 0.986 0.343 0.645 1e-102
359477703 733 PREDICTED: cellulose synthase-like prote 0.983 0.399 0.594 2e-98
255576870 762 cellulose synthase, putative [Ricinus co 0.916 0.358 0.629 9e-97
356535446 740 PREDICTED: cellulose synthase-like prote 0.986 0.397 0.565 5e-88
224111026 723 predicted protein [Populus trichocarpa] 0.939 0.387 0.588 3e-84
356548660 736 PREDICTED: cellulose synthase-like prote 0.986 0.399 0.535 4e-84
255576868 711 cellulose synthase, putative [Ricinus co 0.983 0.412 0.527 6e-84
>gi|297737188|emb|CBI26389.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
 Score =  381 bits (978), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 184/296 (62%), Positives = 228/296 (77%), Gaps = 3/296 (1%)

Query: 1   MYHSLVEDYFTGFKQLHCKGWRSVYLNPERPQFLGTSTTNLNDSLVQGTRWSSGLVQVAI 60
           +Y S++EDY T F  +HC+GW SVY NP +PQFLG+  TN+ND LVQGTRWSSGL  VAI
Sbjct: 506 LYQSVLEDYLTAFT-MHCRGWTSVYCNPSKPQFLGSGVTNMNDLLVQGTRWSSGLFDVAI 564

Query: 61  SKYCPLIYGPPRMSLLESMAYADLGMFPLLNCLPLWCFATVPQLCLLHGIPLYPEVLSSS 120
           SK+ PLIYGP RMS+LES  YA L  FPL   + +WCF  +PQLCLL+GIPLYP+V  S 
Sbjct: 565 SKFSPLIYGPLRMSILESFCYAYLAYFPLY-FISVWCFGIIPQLCLLNGIPLYPKVSDSF 623

Query: 121 SPIFVFVFLSALSKHLYEVLSTGGSIKIWRNEQRIWMIRAVTCQLYGSLNAIMHKLGLAE 180
             IF F+F+S+LSKHLYEVL TGGS + W NEQR WMI+++TC LYGS++AIM K+G+ E
Sbjct: 624 FMIFAFIFVSSLSKHLYEVLFTGGSFQTWMNEQRNWMIKSLTCHLYGSMDAIMKKIGMRE 683

Query: 181 ASFSATNKVADDEQVKLYGMGKFDFRTSKMFLAPLVTIILLNIAAFVCGAIRSTIITGDW 240
           ASF  TNKV D+EQ KLY MGKFDFRTS   LAP+V +++ N+AAF+ G  R  I  G+W
Sbjct: 684 ASFLTTNKVVDNEQEKLYQMGKFDFRTSTAILAPVVILVISNMAAFMVGLAR-VIAAGNW 742

Query: 241 DKMFVQISLSFYILVMNYAIIEGMIVRKDNGRIPPSVTLSSALLSGIFLPLVSIIL 296
           DKMFVQ+ LSFYIL+M+Y I+EGMI+RKD GR+PPS+TL S +L+ + L L S  L
Sbjct: 743 DKMFVQVVLSFYILIMSYPIVEGMILRKDKGRVPPSITLLSTVLAMVLLTLGSTAL 798

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|359477392|ref|XP_002280640.2| PREDICTED: cellulose synthase-like protein G2-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|147785659|emb|CAN70913.1| hypothetical protein VITISV_002996 [Vitis vinifera] Back     alignment and taxonomy information
>gi|224111028|ref|XP_002315722.1| predicted protein [Populus trichocarpa] gi|222864762|gb|EEF01893.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|359477703|ref|XP_002280696.2| PREDICTED: cellulose synthase-like protein G2-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|255576870|ref|XP_002529321.1| cellulose synthase, putative [Ricinus communis] gi|223531245|gb|EEF33090.1| cellulose synthase, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|356535446|ref|XP_003536256.1| PREDICTED: cellulose synthase-like protein G2-like [Glycine max] Back     alignment and taxonomy information
>gi|224111026|ref|XP_002315721.1| predicted protein [Populus trichocarpa] gi|222864761|gb|EEF01892.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|356548660|ref|XP_003542718.1| PREDICTED: cellulose synthase-like protein G2-like [Glycine max] Back     alignment and taxonomy information
>gi|255576868|ref|XP_002529320.1| cellulose synthase, putative [Ricinus communis] gi|223531244|gb|EEF33089.1| cellulose synthase, putative [Ricinus communis] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query298
TAIR|locus:2138116722 CSLG2 "AT4G24000" [Arabidopsis 0.929 0.383 0.365 8.9e-47
TAIR|locus:2012050729 CSLE1 "AT1G55850" [Arabidopsis 0.942 0.385 0.374 1.5e-44
TAIR|locus:2138106751 CSLG3 "AT4G23990" [Arabidopsis 0.942 0.374 0.360 5.1e-43
TAIR|locus:2138126760 CSLG1 "AT4G24010" [Arabidopsis 0.895 0.351 0.347 3.2e-42
TAIR|locus:21724571049 CESA4 "cellulose synthase A4" 0.936 0.265 0.342 1.9e-40
TAIR|locus:21789351026 IRX3 "IRREGULAR XYLEM 3" [Arab 0.926 0.269 0.336 2.7e-39
TAIR|locus:2124167985 IRX1 "IRREGULAR XYLEM 1" [Arab 0.926 0.280 0.340 3.1e-39
TAIR|locus:21567891065 CEV1 "CONSTITUTIVE EXPRESSION 0.926 0.259 0.323 4e-37
TAIR|locus:21277761081 CESA1 "cellulose synthase 1" [ 0.926 0.255 0.306 6.3e-36
TAIR|locus:20525761088 CESA9 "cellulose synthase A9" 0.916 0.250 0.319 8.1e-36
TAIR|locus:2138116 CSLG2 "AT4G24000" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 492 (178.3 bits), Expect = 8.9e-47, P = 8.9e-47
 Identities = 105/287 (36%), Positives = 168/287 (58%)

Query:     2 YHSLVEDYFTGFKQLHCKGWRSVYLNPERPQFLGTSTTNLNDSLVQGTRWSSGLVQVAIS 61
             Y SLVEDYFTGF  LHC+GWRS++ +P +  F G S   L D + Q  RWS GL++VA S
Sbjct:   431 YGSLVEDYFTGF-MLHCEGWRSIFCSPTKAAFYGDSPKCLTDVIGQQIRWSVGLLEVAFS 489

Query:    62 KYCPLIYGPPRMSLLESMAYADLGMFPLLNCLPLWCFATVPQLCLLHGIPLYPEVLSSSS 121
             +Y PL YG   +SLL S+ Y     +P   C+PL  +  +PQ+ L+HG+ ++P+      
Sbjct:   490 RYNPLTYGIKPLSLLMSLGYCHYAFWPFW-CIPLVVYGILPQVALIHGVSVFPKASDPWF 548

Query:   122 PIFVFVFLSALSKHLYEVLSTGGSIKIWRNEQRIWMIRAVTCQLYGSLNAIMHKLGLAEA 181
              +++ +FL   ++ L + L  GG+ + W N+QR+WM+R ++   +G     +  L L+  
Sbjct:   549 WLYIILFLGGYAQDLSDFLLEGGTYRKWWNDQRMWMVRGLSSFFFGFTEFTLKTLNLSTQ 608

Query:   182 SFSATNKVADD-EQVKLYGMGKFDFR-TSKMFLAPLVTIILLNIAAFVCGAIRSTIITGD 239
              ++ T+K  DD EQ+K Y    FDF  +S MFL P+ T+ ++N+ AF+ G     I T  
Sbjct:   609 GYNVTSKSNDDNEQMKRYEQEIFDFGPSSSMFL-PITTVAIMNLLAFMRGLYG--IFT-- 663

Query:   240 WDK-MFVQISLSFYILVMNYAIIEGMIVRKDNGRIPPSVTLSSALLS 285
             W +   +++ L+ + +V    I E M++R D+G++P  +   + LLS
Sbjct:   664 WGEGPVLELMLASFAVVNCLPIYEAMVLRIDDGKLPKRICFLAGLLS 710
GO:0000271 "polysaccharide biosynthetic process" evidence=ISS
GO:0005794 "Golgi apparatus" evidence=ISM
GO:0016020 "membrane" evidence=IEA
GO:0016740 "transferase activity" evidence=ISS
GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISS
GO:0016759 "cellulose synthase activity" evidence=ISS
GO:0016760 "cellulose synthase (UDP-forming) activity" evidence=IEA
GO:0030244 "cellulose biosynthetic process" evidence=IEA
TAIR|locus:2012050 CSLE1 "AT1G55850" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2138106 CSLG3 "AT4G23990" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2138126 CSLG1 "AT4G24010" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2172457 CESA4 "cellulose synthase A4" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2178935 IRX3 "IRREGULAR XYLEM 3" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2124167 IRX1 "IRREGULAR XYLEM 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2156789 CEV1 "CONSTITUTIVE EXPRESSION OF VSP 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2127776 CESA1 "cellulose synthase 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2052576 CESA9 "cellulose synthase A9" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer2.4.1LOW CONFIDENCE prediction!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
GSVIVG00020164001
SubName- Full=Chromosome chr5 scaffold_2, whole genome shotgun sequence; (741 aa)
(Vitis vinifera)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query298
PLN02893734 PLN02893, PLN02893, Cellulose synthase-like protei 4e-77
PLN029151044 PLN02915, PLN02915, cellulose synthase A [UDP-form 7e-52
pfam03552716 pfam03552, Cellulose_synt, Cellulose synthase 8e-49
PLN021891040 PLN02189, PLN02189, cellulose synthase 2e-48
PLN026381079 PLN02638, PLN02638, cellulose synthase A (UDP-form 6e-46
PLN02195977 PLN02195, PLN02195, cellulose synthase A 6e-45
PLN024361094 PLN02436, PLN02436, cellulose synthase A 2e-43
PLN024001085 PLN02400, PLN02400, cellulose synthase 2e-43
PLN022481135 PLN02248, PLN02248, cellulose synthase-like protei 7e-27
PLN02190756 PLN02190, PLN02190, cellulose synthase-like protei 1e-22
cd06421234 cd06421, CESA_CelA_like, CESA_CelA_like are involv 1e-09
TIGR03030713 TIGR03030, CelA, cellulose synthase catalytic subu 8e-05
>gnl|CDD|215483 PLN02893, PLN02893, Cellulose synthase-like protein Back     alignment and domain information 
 Score =  248 bits (635), Expect = 4e-77
 Identities = 116/301 (38%), Positives = 186/301 (61%), Gaps = 13/301 (4%)

Query: 2   YHSLVEDYFTGFKQLHCKGWRSVYLNPERPQFLGTSTTNLNDSLVQGTRWSSGLVQVAIS 61
           Y SLVEDY+TG+ +L C+GW+S++ NP+RP FLG S  NL+D L Q  RWS GL++VA S
Sbjct: 442 YGSLVEDYYTGY-RLQCEGWKSIFCNPKRPAFLGDSPINLHDVLNQQKRWSVGLLEVAFS 500

Query: 62  KYCPLIYGPPRMSLLESMAYADLGMFPLLNCLPLWCFATVPQLCLLHGIPLYPEVLSSSS 121
           KY P+ +G   + LL  + YA    +P+   +P+  +A +PQL LL+G+ ++P+    S 
Sbjct: 501 KYSPITFGVKSIGLLMGLGYAHYAFWPIW-SIPITIYAFLPQLALLNGVSIFPKA---SD 556

Query: 122 PIF---VFVFLSALSKHLYEVLSTGGSIKIWRNEQRIWMIRAVTCQLYGSLNAIMHKLGL 178
           P F   +F+FL A  + L + L +GG+I+ W N+QR+WMIR ++  L+G +  ++  LG+
Sbjct: 557 PWFFLYIFLFLGAYGQDLLDFLLSGGTIQRWWNDQRMWMIRGLSSFLFGLVEFLLKTLGI 616

Query: 179 AEASFSATNKVADDEQVKLYGMGKFDFRT-SKMFLAPLVTIILLNIAAFVCGAIRSTIIT 237
           +   F+ T+KV D+EQ K Y  G F+F   S MFL PL T  ++N+ +F+ G  +  I  
Sbjct: 617 STFGFNVTSKVVDEEQSKRYEQGIFEFGVSSPMFL-PLTTAAIINLVSFLWGIAQ--IFR 673

Query: 238 GDW-DKMFVQISLSFYILVMNYAIIEGMIVRKDNGRIPPSVTLSSALLSGIFLPLVSIIL 296
               + +F+Q+ L+ + +V  + I E M++R D+G++P  +TL S +L+       S   
Sbjct: 674 QRNLEGLFLQMFLAGFAVVNCWPIYEAMVLRTDDGKLPVKITLISIVLAWALYLASSFAF 733

Query: 297 R 297
           +
Sbjct: 734 K 734

Length = 734
>gnl|CDD|215494 PLN02915, PLN02915, cellulose synthase A [UDP-forming], catalytic subunit Back     alignment and domain information
>gnl|CDD|217611 pfam03552, Cellulose_synt, Cellulose synthase Back     alignment and domain information
>gnl|CDD|215121 PLN02189, PLN02189, cellulose synthase Back     alignment and domain information
>gnl|CDD|215343 PLN02638, PLN02638, cellulose synthase A (UDP-forming), catalytic subunit Back     alignment and domain information
>gnl|CDD|215124 PLN02195, PLN02195, cellulose synthase A Back     alignment and domain information
>gnl|CDD|215239 PLN02436, PLN02436, cellulose synthase A Back     alignment and domain information
>gnl|CDD|215224 PLN02400, PLN02400, cellulose synthase Back     alignment and domain information
>gnl|CDD|215138 PLN02248, PLN02248, cellulose synthase-like protein Back     alignment and domain information
>gnl|CDD|215122 PLN02190, PLN02190, cellulose synthase-like protein Back     alignment and domain information
>gnl|CDD|133043 cd06421, CESA_CelA_like, CESA_CelA_like are involved in the elongation of the glucan chain of cellulose Back     alignment and domain information
>gnl|CDD|234095 TIGR03030, CelA, cellulose synthase catalytic subunit (UDP-forming) Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 298
PLN02893734 Cellulose synthase-like protein 100.0
PF03552720 Cellulose_synt: Cellulose synthase; InterPro: IPR0 100.0
PLN02190756 cellulose synthase-like protein 100.0
PLN02195977 cellulose synthase A 100.0
PLN026381079 cellulose synthase A (UDP-forming), catalytic subu 100.0
PLN024001085 cellulose synthase 100.0
PLN021891040 cellulose synthase 100.0
PLN024361094 cellulose synthase A 100.0
PLN029151044 cellulose synthase A [UDP-forming], catalytic subu 100.0
PLN022481135 cellulose synthase-like protein 100.0
TIGR03030 713 CelA cellulose synthase catalytic subunit (UDP-for 100.0
PRK11498 852 bcsA cellulose synthase catalytic subunit; Provisi 100.0
PRK05454691 glucosyltransferase MdoH; Provisional 99.51
TIGR03111439 glyc2_xrt_Gpos1 putative glycosyltransferase TIGR0 99.25
PRK14583444 hmsR N-glycosyltransferase; Provisional 99.23
COG1215439 Glycosyltransferases, probably involved in cell wa 99.21
PRK11204420 N-glycosyltransferase; Provisional 99.2
PRK14716504 bacteriophage N4 adsorption protein B; Provisional 99.08
PRK11234 727 nfrB bacteriophage N4 adsorption protein B; Provis 98.85
PF13632193 Glyco_trans_2_3: Glycosyl transferase family group 98.72
cd06435236 CESA_NdvC_like NdvC_like proteins in this family a 98.49
cd06427241 CESA_like_2 CESA_like_2 is a member of the cellulo 98.42
COG2943 736 MdoH Membrane glycosyltransferase [Cell envelope b 98.19
PRK15489 703 nfrB bacteriophage N4 adsorption protein B; Provis 97.85
TIGR03472373 HpnI hopanoid biosynthesis associated glycosyl tra 97.61
PF03142527 Chitin_synth_2: Chitin synthase; InterPro: IPR0048 97.53
cd02525249 Succinoglycan_BP_ExoA ExoA is involved in the bios 97.23
KOG2571862 consensus Chitin synthase/hyaluronan synthase (gly 96.43
TIGR03469384 HonB hopene-associated glycosyltransferase HpnB. T 92.23
>PLN02893 Cellulose synthase-like protein Back     alignment and domain information 
Probab=100.00  E-value=2e-74  Score=580.58  Aligned_cols=294  Identities=37%  Similarity=0.756  Sum_probs=282.4

Q ss_pred             CCCcccchHHHhHHHHHHCCCeEEecCCCCCccccccCCChhhhhhHhhhhhhhHHHHHHhhcCccccCCCCCCHhHHHH
Q 022376            1 MYHSLVEDYFTGFKQLHCKGWRSVYLNPERPQFLGTSTTNLNDSLVQGTRWSSGLVQVAISKYCPLIYGPPRMSLLESMA   80 (298)
Q Consensus         1 ~YgsiTED~~Tg~~~Lh~~Gwrs~Y~~~~l~af~GlaP~~l~~~l~Qr~RWa~G~~qi~~~k~~Pl~~~~~~L~~~Qrl~   80 (298)
                      +|||+|||++||++ ||+|||||+||+|++++|.|+||+|+.++++||+|||+|++||+++|+||++.|.+||++.||++
T Consensus       441 ~ygsvtED~~Tg~~-lh~~GWrSvY~~p~~~af~G~aP~~l~~~l~Q~~RWa~G~lqI~~s~~nPl~~g~~~L~~~Qrl~  519 (734)
T PLN02893        441 RYGSLVEDYYTGYR-LQCEGWKSIFCNPKRPAFLGDSPINLHDVLNQQKRWSVGLLEVAFSKYSPITFGVKSIGLLMGLG  519 (734)
T ss_pred             EeccccccHHHHHH-HHhcCCcEEecCCCchhhccCCCCCHHHHHHHHHHHHhhhHHHHhhccCchhhcccCCCHHHHHH
Confidence            49999999999999 99999999999999999999999999999999999999999999999999998778999999999


Q ss_pred             hhhhhhhhhhhhHHHHHHHHHHHHHHHhCCCcccccCcchhHHHHHHHHHHHHHHHHHHHHhCCcccccccchhhHHHHH
Q 022376           81 YADLGMFPLLNCLPLWCFATVPQLCLLHGIPLYPEVLSSSSPIFVFVFLSALSKHLYEVLSTGGSIKIWRNEQRIWMIRA  160 (298)
Q Consensus        81 Y~~~~~y~~~~sl~~l~y~l~P~l~ll~g~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~g~~~~~ww~~q~~~~i~~  160 (298)
                      |++.++|| +.|+++++|+++|++||++|++++|+.+.+++..+++++++++.++++|++++|.++++|||+||+|+|.+
T Consensus       520 Y~~~~~~~-~~slp~liY~~~P~l~Ll~g~~i~p~~s~~~f~~yi~l~~s~~~~~~lE~~~sG~t~~~WWn~qr~w~I~~  598 (734)
T PLN02893        520 YAHYAFWP-IWSIPITIYAFLPQLALLNGVSIFPKASDPWFFLYIFLFLGAYGQDLLDFLLSGGTIQRWWNDQRMWMIRG  598 (734)
T ss_pred             HHHHHHHH-HhHHHHHHHHHHHHHHHHcCCcccccccHHHHHHHHHHHHHHHHHHHHHHhccCccHhhhcchheeeehHH
Confidence            99999999 99999999999999999999999998888998888888888888999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHhcccccceeEccCCCchhhhhhhcCcceeeccchhhHHHHHHHHHHHHHHHHHHHHhhhcccCCc
Q 022376          161 VTCQLYGSLNAIMHKLGLAEASFSATNKVADDEQVKLYGMGKFDFRTSKMFLAPLVTIILLNIAAFVCGAIRSTIITGDW  240 (298)
Q Consensus       161 ~~~~~~~~~~~l~~~l~~~~~~F~VT~K~~~~~~~~~y~~~~~~f~~~~~l~~p~~~ll~l~l~al~~g~~~~~~~~~~~  240 (298)
                      +++++++++++++|.+|+++.+|+||+|+.++|+.++|++|.|+|+.++++++|+++++++|++|+++|+.|+ +.++.+
T Consensus       599 ~ss~l~a~l~~iLk~lg~s~~~F~VT~K~~~~~~~~~y~~~~f~f~~~spl~ip~ttl~llNl~a~v~Gi~~~-~~~~~~  677 (734)
T PLN02893        599 LSSFLFGLVEFLLKTLGISTFGFNVTSKVVDEEQSKRYEQGIFEFGVSSPMFLPLTTAAIINLVSFLWGIAQI-FRQRNL  677 (734)
T ss_pred             HHHHHHHHHHHHHHHhcccCCceeecCCCcccccccccccceeeecccchhHHHHHHHHHHHHHHHHHHHHHH-HhCCch
Confidence            9999999999999999999999999999988877789999999999668999999999999999999999998 766778


Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCChHHHHHHHHHHHHHHHHhhhhhc
Q 022376          241 DKMFVQISLSFYILVMNYAIIEGMIVRKDNGRIPPSVTLSSALLSGIFLPLVSIILR  297 (298)
Q Consensus       241 ~~~~~~~~~~~w~v~~l~p~~~~l~~r~~~~~~P~~~~~~s~~~~~~~~~~~~~~~~  297 (298)
                      +.+++++++++|++++++|+++|+++||||+|+|++|+++|++|+.+++.+.+|++|
T Consensus       678 ~~~~~~~~~~~~~v~~~~P~~~gl~~r~dkg~~P~~v~~~s~~l~~~~~~~~~~~~~  734 (734)
T PLN02893        678 EGLFLQMFLAGFAVVNCWPIYEAMVLRTDDGKLPVKITLISIVLAWALYLASSFAFK  734 (734)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCCccHHHHHHHHHHHHHHHHhhhcC
Confidence            888999999999999999999999999999999999999999999999999999986

>PF03552 Cellulose_synt: Cellulose synthase; InterPro: IPR005150 Cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues, is the major component of wood and thus paper, and is synthesized by plants, most algae, some bacteria and fungi, and even some animals Back     alignment and domain information
>PLN02190 cellulose synthase-like protein Back     alignment and domain information
>PLN02195 cellulose synthase A Back     alignment and domain information
>PLN02638 cellulose synthase A (UDP-forming), catalytic subunit Back     alignment and domain information
>PLN02400 cellulose synthase Back     alignment and domain information
>PLN02189 cellulose synthase Back     alignment and domain information
>PLN02436 cellulose synthase A Back     alignment and domain information
>PLN02915 cellulose synthase A [UDP-forming], catalytic subunit Back     alignment and domain information
>PLN02248 cellulose synthase-like protein Back     alignment and domain information
>TIGR03030 CelA cellulose synthase catalytic subunit (UDP-forming) Back     alignment and domain information
>PRK11498 bcsA cellulose synthase catalytic subunit; Provisional Back     alignment and domain information
>PRK05454 glucosyltransferase MdoH; Provisional Back     alignment and domain information
>TIGR03111 glyc2_xrt_Gpos1 putative glycosyltransferase TIGR03111 Back     alignment and domain information
>PRK14583 hmsR N-glycosyltransferase; Provisional Back     alignment and domain information
>COG1215 Glycosyltransferases, probably involved in cell wall biogenesis [Cell envelope biogenesis, outer membrane] Back     alignment and domain information
>PRK11204 N-glycosyltransferase; Provisional Back     alignment and domain information
>PRK14716 bacteriophage N4 adsorption protein B; Provisional Back     alignment and domain information
>PRK11234 nfrB bacteriophage N4 adsorption protein B; Provisional Back     alignment and domain information
>PF13632 Glyco_trans_2_3: Glycosyl transferase family group 2 Back     alignment and domain information
>cd06435 CESA_NdvC_like NdvC_like proteins in this family are putative bacterial beta-(1,6)-glucosyltransferase Back     alignment and domain information
>cd06427 CESA_like_2 CESA_like_2 is a member of the cellulose synthase superfamily Back     alignment and domain information
>COG2943 MdoH Membrane glycosyltransferase [Cell envelope biogenesis, outer membrane] Back     alignment and domain information
>PRK15489 nfrB bacteriophage N4 adsorption protein B; Provisional Back     alignment and domain information
>TIGR03472 HpnI hopanoid biosynthesis associated glycosyl transferase protein HpnI Back     alignment and domain information
>PF03142 Chitin_synth_2: Chitin synthase; InterPro: IPR004835 Chitin synthase (2 Back     alignment and domain information
>cd02525 Succinoglycan_BP_ExoA ExoA is involved in the biosynthesis of succinoglycan Back     alignment and domain information
>KOG2571 consensus Chitin synthase/hyaluronan synthase (glycosyltransferases) [Cell wall/membrane/envelope biogenesis] Back     alignment and domain information
>TIGR03469 HonB hopene-associated glycosyltransferase HpnB Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query298
4hg6_A 802 Cellulose synthase subunit A; membrane translocati 99.93
2fy7_A287 Beta-1,4-galactosyltransferase 1; M339H mutant, AP 92.11
>4hg6_A Cellulose synthase subunit A; membrane translocation, cellulose synthesis, UDP-GLC binding membrane, transferase; HET: BGC UDP LDA; 3.25A {Rhodobacter sphaeroides} Back     alignment and structure
Probab=99.93  E-value=2.3e-24  Score=223.73  Aligned_cols=239  Identities=16%  Similarity=0.227  Sum_probs=174.7

Q ss_pred             CcccchHHHhHHHHHHCCCeEEecCCCCCccccccCCChhhhhhHhhhhhhhHHHHHHhhcCccccCCCCCCHhHHHHhh
Q 022376            3 HSLVEDYFTGFKQLHCKGWRSVYLNPERPQFLGTSTTNLNDSLVQGTRWSSGLVQVAISKYCPLIYGPPRMSLLESMAYA   82 (298)
Q Consensus         3 gsiTED~~Tg~~~Lh~~Gwrs~Y~~~~l~af~GlaP~~l~~~l~Qr~RWa~G~~qi~~~k~~Pl~~~~~~L~~~Qrl~Y~   82 (298)
                      ++++||.+++.+ ++++|||+.|+++....  +.+|+|+.++++||.||++|.+|+++. ++|+..  +++++.||++|+
T Consensus       338 ~~~~ED~~l~~r-l~~~G~ri~~~~~~~~~--~~~p~t~~~~~~Qr~RW~~G~~q~l~~-~~pl~~--~~l~~~~rl~~l  411 (802)
T 4hg6_A          338 ETITEDAETALE-IHSRGWKSLYIDRAMIA--GLQPETFASFIQQRGRWATGMMQMLLL-KNPLFR--RGLGIAQRLCYL  411 (802)
T ss_dssp             SSSSHHHHHHHH-HHTTTCCEEECCCCCEE--ECCCCSHHHHHHHHHHHHHHHHHHHHH-SCTTSC--SSCCHHHHHHHH
T ss_pred             CCcchHHHHHHH-HHHcCCeEEEecCCEEE--ecCCCCHHHHHHHHHHHHccHHHHHHH-hCcccc--CCCCHHHHHHHH
Confidence            568899999999 99999999999876654  999999999999999999999999974 689887  899999999999


Q ss_pred             hhhhhhhhhhHHHHHHHHHHHHHHHhCCCcccccCcchhHHHHHHHHHHHHHHHH-HHHHhCCcccccccchhhHHHHHH
Q 022376           83 DLGMFPLLNCLPLWCFATVPQLCLLHGIPLYPEVLSSSSPIFVFVFLSALSKHLY-EVLSTGGSIKIWRNEQRIWMIRAV  161 (298)
Q Consensus        83 ~~~~y~~~~sl~~l~y~l~P~l~ll~g~~~~~~~~~~~~~~~~~~~l~~~~~~~l-~~~~~g~~~~~ww~~q~~~~i~~~  161 (298)
                      ++..++ +.+++.++++++|++++++|+.++.......    +..++++.....+ .....|..-..||.     .+..+
T Consensus       412 ~~~~~~-~~~~~~li~ll~p~~~ll~~~~~~~~~~~~~----~~~~lp~~l~~~~~~~~~~~~~r~~~~~-----~l~~~  481 (802)
T 4hg6_A          412 NSMSFW-FFPLVRMMFLVAPLIYLFFGIEIFVATFEEV----LAYMPGYLAVSFLVQNALFARQRWPLVS-----EVYEV  481 (802)
T ss_dssp             HHHHHT-THHHHHHHHHHHHHHHHHHCCCCSCCCHHHH----HHHHHHHHHHHHHHHHHHHTTTSCTTHH-----HHHHH
T ss_pred             HHHHHH-HHHHHHHHHHHHHHHHHHHhHHHhhcCHHHH----HHHHHHHHHHHHHHHHHHhcCcHHHHHH-----HHHHH
Confidence            999999 9999999999999999999998876422222    2222333222211 11112221112222     22333


Q ss_pred             HHHHHHHHHHHHHHhcccccceeEccCCCchhhhhhhcCcceeeccchhhHHHHHHHHHHHHHHHHHHHHhhhcccCCch
Q 022376          162 TCQLYGSLNAIMHKLGLAEASFSATNKVADDEQVKLYGMGKFDFRTSKMFLAPLVTIILLNIAAFVCGAIRSTIITGDWD  241 (298)
Q Consensus       162 ~~~~~~~~~~l~~~l~~~~~~F~VT~K~~~~~~~~~y~~~~~~f~~~~~l~~p~~~ll~l~l~al~~g~~~~~~~~~~~~  241 (298)
                      ...++.+..++..++++++.+|+||+|+++.++.        .|   +.+..|+.++++++++++++|+++. ...+  .
T Consensus       482 ~~~~~~~~a~l~~l~~~~~~~f~VT~Kg~~~~~~--------~~---~~~~~p~~~~~~l~~~~~~~~~~~~-~~~~--~  547 (802)
T 4hg6_A          482 AQAPYLARAIVTTLLRPRSARFAVTAKDETLSEN--------YI---SPIYRPLLFTFLLCLSGVLATLVRW-VAFP--G  547 (802)
T ss_dssp             HHHHHHHHHHHHHHHSTTCCCCCCCCCCCCCSSC--------CB---CTTCHHHHHHHHHHHHHHHHHHHHH-HHCG--G
T ss_pred             HHHHHHHHHHHHHHhCCCCCcceECCCCcccccc--------ch---hhHHHHHHHHHHHHHHHHHHHHHHH-hccC--C
Confidence            3444445555566678899999999999865531        11   2678899999999999999999987 5332  2


Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHhhhcCC
Q 022376          242 KMFVQISLSFYILVMNYAIIEGMIVRKDNG  271 (298)
Q Consensus       242 ~~~~~~~~~~w~v~~l~p~~~~l~~r~~~~  271 (298)
                      .....+++++|.++|++.+..++....++.
T Consensus       548 ~~~~~~~~~~w~~~~l~~l~~~~~~~~~~~  577 (802)
T 4hg6_A          548 DRSVLLVVGGWAVLNVLLVGFALRAVAEKQ  577 (802)
T ss_dssp             GHHHHHHHHHHHHHHHHHHHHHHTTTBCCC
T ss_pred             ccchhhhhhHHHHHHHHHHHHHHHHHhcCC
Confidence            233456777888888888888876554443
>2fy7_A Beta-1,4-galactosyltransferase 1; M339H mutant, APO enzyme; HET: PGE; 1.70A {Homo sapiens} PDB: 2aec_A* 2aes_A* 2ae7_A* 2ah9_A* 2agd_A* 2fya_A* 2fyb_A* 3ee5_A* 2fyc_B* 1tw1_A* 1tw5_A* 1tvy_A* 1nmm_B* 1o0r_A* 1yro_B* 1nf5_B* 1nhe_B* 1nkh_B* 1nqi_B* 1nwg_B* ... Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00