Citrus Sinensis ID: 022405

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------
MISSMVTLVFIAALMAATYYASEAAATSKGSFEDNFSIMWSENHFTTSEDGQIWFLSLDKETGCGFQTKQRYRFGWFSMKLKLVGGDSAGVVTAYYMCTENGAGPTRDELDFEFLGNRTGQPYLIQTNIYKNGTGNREMRHMLWFDPTQDYHTYSILWNNHQIVFFVDRVPIRVFKNNGKANDFFPNEKPMYLFSSIWNADEWATRGGLEKTDWKKAPFVSSYKDFSVDGCQWEDPYPECVSTTTKNWWDQYDAWHLSDSQKLDHAWVLRNLVIYDYCKDTERFPTLPVECSLSPWD
cHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccEEEcccccEEEEEEccccccccEEccEEEEEEEEEEEEEEccccccEEEEEEEEEccccccccccEEEEEEcccccccEEEEEEEEEccccccEEEEEcccccccccEEEEEEEcccEEEEEEccEEEEEEEcccccccccccccccEEEEEccccccccccccEEEcccccccEEEEEEEEEEEEccccccccccccccccccccccccccccHHHHHHHHHHHcccEEEEEEccccccccccccccccccc
ccHHHHHHHHHHHHHHHHHHHHccccccccccccccEEEEccccEEEEcccEEEEEEEEccccccccccccEEEEEEEEEEEEcccccccEEEEEEEcccccccccccEEEEEEccccccccEEEEEEEEEcccccccEEEEEEEcccccccEEEEEEcccEEEEEEccccEEEEEccHHcccccccccccEEEEEEcccccHccccccEEcccccccEEEEEEccccccEEcccccccccccccccccccHHHHHccHHHHHHHHHHHHccEEEEccccccccccccccccccccc
MISSMVTLVFIAALMAATYYASEaaatskgsfednfsimwsenhfttsedgqIWFLSLdketgcgfqtkqryrfgWFSMKLKLVGGDSAGVVTAYYMCtengagptrdeldfeflgnrtgqpyliqtniykngtgnremrhmlwfdptqdyhtySILWNNHQivffvdrvpirvfknngkandffpnekpmylfSSIWnadewatrgglektdwkkapfvssykdfsvdgcqwedpypecvstttknwwdqydawhlsdsqkldhAWVLRNLVIYDYckdterfptlpvecslspwd
MISSMVTLVFIAALMAATYYASEAAATSKGSFEDNFSIMWSENHFTTSEDGQIWFLSLDKETGCGFQTKQRYRFGWFSMKLKLVGGDSAGVVTAYYMCTENGAGPTRDELDFEFLgnrtgqpyliQTNIYKNGTGNREMRHMLWFDPTQDYHTYSILWNNHQIVFFVDRVPIRVFKNngkandffpnEKPMYLFSSIWNADEWATRGGlektdwkkapfvSSYKDFSVDGCQWEDPYPECVSTTTKNWWDQYDAWHLSDSQKLDHAWVLRNLVIYDYCKDTErfptlpvecslspwd
MISSMVTLVFIaalmaatyyaseaaatsKGSFEDNFSIMWSENHFTTSEDGQIWFLSLDKETGCGFQTKQRYRFGWFSMKLKLVGGDSAGVVTAYYMCTENGAGPTRDELDFEFLGNRTGQPYLIQTNIYKNGTGNREMRHMLWFDPTQDYHTYSILWNNHQIVFFVDRVPIRVFKNNGKANDFFPNEKPMYLFSSIWNADEWATRGGLEKTDWKKAPFVSSYKDFSVDGCQWEDPYPECVSTTTKNWWDQYDAWHLSDSQKLDHAWVLRNLVIYDYCKDTERFPTLPVECSLSPWD
****MVTLVFIAALMAATYYASEAAATSKGSFEDNFSIMWSENHFTTSEDGQIWFLSLDKETGCGFQTKQRYRFGWFSMKLKLVGGDSAGVVTAYYMCTENGAGPTRDELDFEFLGNRTGQPYLIQTNIYKNGTGNREMRHMLWFDPTQDYHTYSILWNNHQIVFFVDRVPIRVFKNNGKANDFFPNEKPMYLFSSIWNADEWATRGGLEKTDWKKAPFVSSYKDFSVDGCQWEDPYPECVSTTTKNWWDQYDAWHLSDSQKLDHAWVLRNLVIYDYCKDTERFPTLPVEC******
***S*VTLVFIAALMAATYYASEAAATSKGSFEDNFSIMWSENHFTTSEDGQIWFLSLDKETGCGFQTKQRYRFGWFSMKLKLVGGDSAGVVTAYYMCTENGAGPTRDELDFEFLGNRTGQPYLIQTNIYKNGTGNREMRHMLWFDPTQDYHTYSILWNNHQIVFFVDRVPIRVFKNNGKANDFFPNEKPMYLFSSIWNADEWATRGGLEKTDWKKAPFVSSYKDFSVDGCQWEDPYPE*VSTT****WD*******SDSQKLDHAWVLRNLVIYDYCKDTERFPTLPVECSLS***
MISSMVTLVFIAALMAATYYASEAAATSKGSFEDNFSIMWSENHFTTSEDGQIWFLSLDKETGCGFQTKQRYRFGWFSMKLKLVGGDSAGVVTAYYMCTENGAGPTRDELDFEFLGNRTGQPYLIQTNIYKNGTGNREMRHMLWFDPTQDYHTYSILWNNHQIVFFVDRVPIRVFKNNGKANDFFPNEKPMYLFSSIWNADEWATRGGLEKTDWKKAPFVSSYKDFSVDGCQWEDPYPECVSTTTKNWWDQYDAWHLSDSQKLDHAWVLRNLVIYDYCKDTERFPTLPVECSLSPWD
*ISSMVTLVFIAALMAATYYASEAAATSKGSFEDNFSIMWSENHFTTSEDGQIWFLSLDKETGCGFQTKQRYRFGWFSMKLKLVGGDSAGVVTAYYMCTENGAGPTRDELDFEFLGNRTGQPYLIQTNIYKNGTGNREMRHMLWFDPTQDYHTYSILWNNHQIVFFVDRVPIRVFKNNGKANDFFPNEKPMYLFSSIWNADEWATRGGLEKTDWKKAPFVSSYKDFSVDGCQWEDPYPEC*****KNWWDQYDAWHLSDSQKLDHAWVLRNLVIYDYCKDTERFPTLPVECS*****
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iiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
SSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHoooooo
SSSSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MISSMVTLVFIAALMAATYYASEAAATSKGSFEDNFSIMWSENHFTTSEDGQIWFLSLDKETGCGFQTKQRYRFGWFSMKLKLVGGDSAGVVTAYYMCTENGAGPTRDELDFEFLGNRTGQPYLIQTNIYKNGTGNREMRHMLWFDPTQDYHTYSILWNNHQIVFFVDRVPIRVFKNNGKANDFFPNEKPMYLFSSIWNADEWATRGGLEKTDWKKAPFVSSYKDFSVDGCQWEDPYPECVSTTTKNWWDQYDAWHLSDSQKLDHAWVLRNLVIYDYCKDTERFPTLPVECSLSPWD
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query297 2.2.26 [Sep-21-2011]
Q8L9A9305 Probable xyloglucan endot yes no 0.976 0.950 0.808 1e-145
Q8LF99292 Probable xyloglucan endot no no 0.922 0.938 0.486 2e-78
Q9XIW1293 Probable xyloglucan endot no no 0.956 0.969 0.5 1e-77
Q8LER3293 Probable xyloglucan endot no no 0.915 0.928 0.487 1e-76
Q41542293 Probable xyloglucan endot N/A no 0.861 0.873 0.526 4e-76
P93349295 Probable xyloglucan endot N/A no 0.868 0.874 0.526 2e-75
Q9ZVK1299 Probable xyloglucan endot no no 0.959 0.953 0.467 2e-75
Q8LNZ5293 Probable xyloglucan endot N/A no 0.966 0.979 0.487 5e-75
Q6YDN9295 Xyloglucan endotransgluco N/A no 0.946 0.952 0.491 4e-74
Q41638292 Xyloglucan endotransgluco N/A no 0.966 0.982 0.489 4e-74
>sp|Q8L9A9|XTH8_ARATH Probable xyloglucan endotransglucosylase/hydrolase protein 8 OS=Arabidopsis thaliana GN=XTH8 PE=2 SV=2 Back     alignment and function desciption
 Score =  513 bits (1322), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 240/297 (80%), Positives = 270/297 (90%), Gaps = 7/297 (2%)

Query: 3   SSMVTL-VFIAALMAATYYASEAAATSKGSFEDNFSIMWSENHFTTSEDGQIWFLSLDKE 61
           S+M  L +F+ ALMA+    S  AAT   SFEDNF+IMWSENHFTTS+DG+IW LSLD +
Sbjct: 12  SAMTALFLFMTALMAS----SSIAATPTQSFEDNFNIMWSENHFTTSDDGEIWNLSLDND 67

Query: 62  TGCGFQTKQRYRFGWFSMKLKLVGGDSAGVVTAYYMCTENGAGPTRDELDFEFLGNRTGQ 121
           TGCGFQTK  YRFGWFSMKLKLVGGDSAGVVTAYYMC+ENGAGP RDE+DFEFLGNRTGQ
Sbjct: 68  TGCGFQTKHMYRFGWFSMKLKLVGGDSAGVVTAYYMCSENGAGPERDEIDFEFLGNRTGQ 127

Query: 122 PYLIQTNIYKNGTGNREMRHMLWFDPTQDYHTYSILWNNHQIVFFVDRVPIRVFKNNGKA 181
           PY+IQTN+YKNGTGNREMRH LWFDPT+DYHTYSILWNNHQ+VFFVDRVPIRV+KN+ K 
Sbjct: 128 PYIIQTNVYKNGTGNREMRHSLWFDPTKDYHTYSILWNNHQLVFFVDRVPIRVYKNSDKV 187

Query: 182 --NDFFPNEKPMYLFSSIWNADEWATRGGLEKTDWKKAPFVSSYKDFSVDGCQWEDPYPE 239
             NDFFPN+KPMYLFSSIWNAD+WATRGGLEKTDWKKAPFVSSYKDF+V+GC+W+DP+P 
Sbjct: 188 PNNDFFPNQKPMYLFSSIWNADDWATRGGLEKTDWKKAPFVSSYKDFAVEGCRWKDPFPA 247

Query: 240 CVSTTTKNWWDQYDAWHLSDSQKLDHAWVLRNLVIYDYCKDTERFPTLPVECSLSPW 296
           CVSTTT+NWWDQYDAWHLS +QK+D+AWV RNLV+YDYCKD+ERFPTLP ECS+SPW
Sbjct: 248 CVSTTTENWWDQYDAWHLSKTQKMDYAWVQRNLVVYDYCKDSERFPTLPWECSISPW 304
Catalyzes xyloglucan endohydrolysis (XEH) and/or endotransglycosylation (XET). Cleaves and religates xyloglucan polymers, an essential constituent of the primary cell wall, and thereby participates in cell wall construction of growing tissues.
Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 4EC: .EC: 1EC: .EC: 2EC: 0EC: 7
>sp|Q8LF99|XTH6_ARATH Probable xyloglucan endotransglucosylase/hydrolase protein 6 OS=Arabidopsis thaliana GN=XTH6 PE=2 SV=2 Back     alignment and function description
>sp|Q9XIW1|XTH5_ARATH Probable xyloglucan endotransglucosylase/hydrolase protein 5 OS=Arabidopsis thaliana GN=XTH5 PE=2 SV=1 Back     alignment and function description
>sp|Q8LER3|XTH7_ARATH Probable xyloglucan endotransglucosylase/hydrolase protein 7 OS=Arabidopsis thaliana GN=XTH7 PE=2 SV=2 Back     alignment and function description
>sp|Q41542|XTH_WHEAT Probable xyloglucan endotransglucosylase/hydrolase OS=Triticum aestivum GN=XTH PE=2 SV=1 Back     alignment and function description
>sp|P93349|XTH_TOBAC Probable xyloglucan endotransglucosylase/hydrolase protein OS=Nicotiana tabacum GN=XTH PE=2 SV=1 Back     alignment and function description
>sp|Q9ZVK1|XTH10_ARATH Probable xyloglucan endotransglucosylase/hydrolase protein 10 OS=Arabidopsis thaliana GN=XTH10 PE=2 SV=1 Back     alignment and function description
>sp|Q8LNZ5|XTHB_PHAAN Probable xyloglucan endotransglucosylase/hydrolase protein B OS=Phaseolus angularis GN=XTHB PE=2 SV=1 Back     alignment and function description
>sp|Q6YDN9|XTH_BRAOB Xyloglucan endotransglucosylase/hydrolase OS=Brassica oleracea var. botrytis GN=XET16A PE=1 SV=1 Back     alignment and function description
>sp|Q41638|XTHA_PHAAN Xyloglucan endotransglucosylase/hydrolase protein A OS=Phaseolus angularis GN=XTHA PE=1 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query297
255554981300 Xyloglucan endotransglucosylase/hydrolas 0.996 0.986 0.905 1e-162
187372986300 xyloglucan endotransglucosylase/hydrolas 0.993 0.983 0.850 1e-153
359807291302 uncharacterized protein LOC100790013 pre 0.976 0.960 0.865 1e-153
356575805301 PREDICTED: probable xyloglucan endotrans 0.973 0.960 0.868 1e-153
118488165293 unknown [Populus trichocarpa] 0.936 0.948 0.902 1e-152
388510250300 unknown [Medicago truncatula] 0.993 0.983 0.854 1e-151
224076337294 predicted protein [Populus trichocarpa] 0.932 0.942 0.902 1e-151
225444379300 PREDICTED: probable xyloglucan endotrans 0.993 0.983 0.833 1e-149
388505044304 unknown [Lotus japonicus] 0.986 0.963 0.833 1e-147
187372954294 xyloglucan endotransglucosylase/hydrolas 0.919 0.928 0.890 1e-145
>gi|255554981|ref|XP_002518528.1| Xyloglucan endotransglucosylase/hydrolase protein A precursor, putative [Ricinus communis] gi|223542373|gb|EEF43915.1| Xyloglucan endotransglucosylase/hydrolase protein A precursor, putative [Ricinus communis] Back     alignment and taxonomy information
 Score =  577 bits (1487), Expect = e-162,   Method: Compositional matrix adjust.
 Identities = 268/296 (90%), Positives = 281/296 (94%)

Query: 2   ISSMVTLVFIAALMAATYYASEAAATSKGSFEDNFSIMWSENHFTTSEDGQIWFLSLDKE 61
           +S M  L+F AAL+AA Y  S  AA SKGSFEDNFSIMWSENHF TSEDGQIW+LSLDKE
Sbjct: 5   VSPMAALLFTAALVAAVYCISSEAAVSKGSFEDNFSIMWSENHFKTSEDGQIWYLSLDKE 64

Query: 62  TGCGFQTKQRYRFGWFSMKLKLVGGDSAGVVTAYYMCTENGAGPTRDELDFEFLGNRTGQ 121
           TGCGFQTKQRYRFGWFSMKLKLVGGDSAGVVTAYYMCTENGAGPTRDELDFEFLGNRTG+
Sbjct: 65  TGCGFQTKQRYRFGWFSMKLKLVGGDSAGVVTAYYMCTENGAGPTRDELDFEFLGNRTGE 124

Query: 122 PYLIQTNIYKNGTGNREMRHMLWFDPTQDYHTYSILWNNHQIVFFVDRVPIRVFKNNGKA 181
           PYLIQTN+YKNGTGNREMRHMLWFDPT+++HTYSILWNNHQIVFFVDRVP+RV KNNGK 
Sbjct: 125 PYLIQTNVYKNGTGNREMRHMLWFDPTEEFHTYSILWNNHQIVFFVDRVPVRVHKNNGKE 184

Query: 182 NDFFPNEKPMYLFSSIWNADEWATRGGLEKTDWKKAPFVSSYKDFSVDGCQWEDPYPECV 241
           N+FFPNEKPMYLFSSIWNADEWATRGGLEKTDWKKAPFVSSYKDFSVDGCQWEDPYP CV
Sbjct: 185 NNFFPNEKPMYLFSSIWNADEWATRGGLEKTDWKKAPFVSSYKDFSVDGCQWEDPYPACV 244

Query: 242 STTTKNWWDQYDAWHLSDSQKLDHAWVLRNLVIYDYCKDTERFPTLPVECSLSPWD 297
           STTTKNWWDQYDAWHLSDSQK+D+AWV RNLVIYDYCKDTERFPTLPVECSLSPWD
Sbjct: 245 STTTKNWWDQYDAWHLSDSQKMDYAWVQRNLVIYDYCKDTERFPTLPVECSLSPWD 300

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|187372986|gb|ACD03227.1| xyloglucan endotransglucosylase/hydrolase 3 [Malus x domestica] Back     alignment and taxonomy information
>gi|359807291|ref|NP_001241628.1| uncharacterized protein LOC100790013 precursor [Glycine max] gi|255641764|gb|ACU21152.1| unknown [Glycine max] Back     alignment and taxonomy information
>gi|356575805|ref|XP_003556027.1| PREDICTED: probable xyloglucan endotransglucosylase/hydrolase protein 8-like [Glycine max] Back     alignment and taxonomy information
>gi|118488165|gb|ABK95902.1| unknown [Populus trichocarpa] Back     alignment and taxonomy information
>gi|388510250|gb|AFK43191.1| unknown [Medicago truncatula] Back     alignment and taxonomy information
>gi|224076337|ref|XP_002304928.1| predicted protein [Populus trichocarpa] gi|222847892|gb|EEE85439.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|225444379|ref|XP_002264995.1| PREDICTED: probable xyloglucan endotransglucosylase/hydrolase protein 8 [Vitis vinifera] gi|302144070|emb|CBI23175.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|388505044|gb|AFK40588.1| unknown [Lotus japonicus] Back     alignment and taxonomy information
>gi|187372954|gb|ACD03211.1| xyloglucan endotransglucosylase/hydrolase 1 [Actinidia eriantha] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query297
TAIR|locus:2823919305 XTH8 "xyloglucan endotransgluc 0.895 0.872 0.850 1.7e-137
TAIR|locus:2169990292 XTH6 "xyloglucan endotransgluc 0.865 0.880 0.521 7.3e-75
TAIR|locus:2159118293 XTH5 "xyloglucan endotransgluc 0.861 0.873 0.538 3.1e-74
TAIR|locus:2137609293 XTH7 "xyloglucan endotransgluc 0.861 0.873 0.511 8.4e-74
TAIR|locus:2065821296 XTH4 "xyloglucan endotransgluc 0.861 0.864 0.530 3.7e-71
TAIR|locus:2064284299 XTH10 "xyloglucan endotransglu 0.878 0.872 0.486 1.6e-70
TAIR|locus:2174572285 XTH12 "xyloglucan endotransglu 0.865 0.901 0.494 1.5e-67
TAIR|locus:2125437290 XTH9 "xyloglucan endotransgluc 0.855 0.875 0.488 2.4e-67
TAIR|locus:2174582284 XTH13 "xyloglucan endotransglu 0.865 0.904 0.498 3.1e-67
TAIR|locus:2174597284 XTH25 "xyloglucan endotransglu 0.855 0.894 0.486 4.5e-66
TAIR|locus:2823919 XTH8 "xyloglucan endotransglucosylase/hydrolase 8" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1346 (478.9 bits), Expect = 1.7e-137, P = 1.7e-137
 Identities = 228/268 (85%), Positives = 254/268 (94%)

Query:    31 SFEDNFSIMWSENHFTTSEDGQIWFLSLDKETGCGFQTKQRYRFGWFSMKLKLVGGDSAG 90
             SFEDNF+IMWSENHFTTS+DG+IW LSLD +TGCGFQTK  YRFGWFSMKLKLVGGDSAG
Sbjct:    37 SFEDNFNIMWSENHFTTSDDGEIWNLSLDNDTGCGFQTKHMYRFGWFSMKLKLVGGDSAG 96

Query:    91 VVTAYYMCTENGAGPTRDELDFEFLGNRTGQPYLIQTNIYKNGTGNREMRHMLWFDPTQD 150
             VVTAYYMC+ENGAGP RDE+DFEFLGNRTGQPY+IQTN+YKNGTGNREMRH LWFDPT+D
Sbjct:    97 VVTAYYMCSENGAGPERDEIDFEFLGNRTGQPYIIQTNVYKNGTGNREMRHSLWFDPTKD 156

Query:   151 YHTYSILWNNHQIVFFVDRVPIRVFKNNGKA--NDFFPNEKPMYLFSSIWNADEWATRGG 208
             YHTYSILWNNHQ+VFFVDRVPIRV+KN+ K   NDFFPN+KPMYLFSSIWNAD+WATRGG
Sbjct:   157 YHTYSILWNNHQLVFFVDRVPIRVYKNSDKVPNNDFFPNQKPMYLFSSIWNADDWATRGG 216

Query:   209 LEKTDWKKAPFVSSYKDFSVDGCQWEDPYPECVSTTTKNWWDQYDAWHLSDSQKLDHAWV 268
             LEKTDWKKAPFVSSYKDF+V+GC+W+DP+P CVSTTT+NWWDQYDAWHLS +QK+D+AWV
Sbjct:   217 LEKTDWKKAPFVSSYKDFAVEGCRWKDPFPACVSTTTENWWDQYDAWHLSKTQKMDYAWV 276

Query:   269 LRNLVIYDYCKDTERFPTLPVECSLSPW 296
              RNLV+YDYCKD+ERFPTLP ECS+SPW
Sbjct:   277 QRNLVVYDYCKDSERFPTLPWECSISPW 304
GO:0004553 "hydrolase activity, hydrolyzing O-glycosyl compounds" evidence=IEA
GO:0005576 "extracellular region" evidence=ISM
GO:0005618 "cell wall" evidence=IEA
GO:0005975 "carbohydrate metabolic process" evidence=IEA
GO:0006073 "cellular glucan metabolic process" evidence=IEA
GO:0016762 "xyloglucan:xyloglucosyl transferase activity" evidence=IEA
GO:0016798 "hydrolase activity, acting on glycosyl bonds" evidence=ISS
GO:0048046 "apoplast" evidence=IEA
TAIR|locus:2169990 XTH6 "xyloglucan endotransglucosylase/hydrolase 6" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2159118 XTH5 "xyloglucan endotransglucosylase/hydrolase 5" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2137609 XTH7 "xyloglucan endotransglucosylase/hydrolase 7" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2065821 XTH4 "xyloglucan endotransglucosylase/hydrolase 4" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2064284 XTH10 "xyloglucan endotransglucosylase/hydrolase 10" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2174572 XTH12 "xyloglucan endotransglucosylase/hydrolase 12" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2125437 XTH9 "xyloglucan endotransglucosylase/hydrolase 9" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2174582 XTH13 "xyloglucan endotransglucosylase/hydrolase 13" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2174597 XTH25 "xyloglucan endotransglucosylase/hydrolase 25" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q40144XTH1_SOLLC2, ., 4, ., 1, ., 2, 0, 70.50380.86860.8716N/Ano
P93349XTH_TOBAC2, ., 4, ., 1, ., 2, 0, 70.52670.86860.8745N/Ano
Q41542XTH_WHEAT2, ., 4, ., 1, ., 2, 0, 70.52690.86190.8737N/Ano
Q8L9A9XTH8_ARATH2, ., 4, ., 1, ., 2, 0, 70.80800.97640.9508yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer2.4.1LOW CONFIDENCE prediction!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query297
cd02176263 cd02176, GH16_XET, Xyloglucan endotransglycosylase 1e-152
PLN03161291 PLN03161, PLN03161, Probable xyloglucan endotransg 1e-88
pfam00722174 pfam00722, Glyco_hydro_16, Glycosyl hydrolases fam 5e-70
cd02183203 cd02183, GH16_fungal_CRH1_transglycosylase, glycos 3e-21
cd02175212 cd02175, GH16_lichenase, lichenase, member of glyc 2e-20
cd00413210 cd00413, Glyco_hydrolase_16, glycosyl hydrolase fa 5e-16
COG2273355 COG2273, SKN1, Beta-glucanase/Beta-glucan syntheta 1e-11
pfam0695551 pfam06955, XET_C, Xyloglucan endo-transglycosylase 2e-11
cd08023235 cd08023, GH16_laminarinase_like, Laminarinase, mem 3e-07
>gnl|CDD|185685 cd02176, GH16_XET, Xyloglucan endotransglycosylase, member of glycosyl hydrolase family 16 Back     alignment and domain information 
 Score =  427 bits (1099), Expect = e-152
 Identities = 132/265 (49%), Positives = 177/265 (66%), Gaps = 2/265 (0%)

Query: 27  TSKGSFEDNFSIMWSENHFTTSEDGQIWFLSLDKETGCGFQTKQRYRFGWFSMKLKLVGG 86
               SF++NF + W  +H   S DG    L+LD+ +G GF++K +Y FG+FSM++KL  G
Sbjct: 1   AVAASFDENFFVTWGPDHIRVSNDGTSVQLTLDQSSGSGFKSKNKYLFGFFSMRIKLPPG 60

Query: 87  DSAGVVTAYYMCTENGAGPTRDELDFEFLGNRTGQPYLIQTNIYKNGTGNREMRHMLWFD 146
           DSAG VTA+Y+   +      DE+DFEFLGN TGQPY +QTN++ NG G RE R  LWFD
Sbjct: 61  DSAGTVTAFYLS--SQGPDNHDEIDFEFLGNVTGQPYTLQTNVFANGVGGREQRIYLWFD 118

Query: 147 PTQDYHTYSILWNNHQIVFFVDRVPIRVFKNNGKANDFFPNEKPMYLFSSIWNADEWATR 206
           PT D+HTYSILWN HQIVF+VD VPIRVFKNN      +P+ +PM +++SIW+  +WAT+
Sbjct: 119 PTADFHTYSILWNPHQIVFYVDDVPIRVFKNNEALGVPYPSSQPMGVYASIWDGSDWATQ 178

Query: 207 GGLEKTDWKKAPFVSSYKDFSVDGCQWEDPYPECVSTTTKNWWDQYDAWHLSDSQKLDHA 266
           GG  K DW  APFV+SY+DF +DGC  +        + T++WW+      LS +Q+    
Sbjct: 179 GGRVKIDWSYAPFVASYRDFKLDGCVVDPGDSFSSCSCTEDWWNGSTYQQLSANQQRAME 238

Query: 267 WVLRNLVIYDYCKDTERFPTLPVEC 291
           WV RN ++YDYC D +R+P  P EC
Sbjct: 239 WVRRNYMVYDYCDDRKRYPVPPPEC 263

Xyloglucan endotransglycosylases (XETs) cleave and religate xyloglucan polymers in plant cell walls via a transglycosylation mechanism. Xyloglucan is a soluble hemicellulose with a backbone of beta-1,4-linked glucose units, partially substituted with alpha-1,6-linked xylopyranose branches. It binds noncovalently to cellulose, cross-linking the adjacent cellulose microfibrils, giving it a key structural role as a matrix polymer. Therefore, XET plays an important role in all plant processes that require cell wall remodeling. Length = 263
>gnl|CDD|178706 PLN03161, PLN03161, Probable xyloglucan endotransglucosylase/hydrolase protein; Provisional Back     alignment and domain information
>gnl|CDD|216081 pfam00722, Glyco_hydro_16, Glycosyl hydrolases family 16 Back     alignment and domain information
>gnl|CDD|185692 cd02183, GH16_fungal_CRH1_transglycosylase, glycosylphosphatidylinositol-glucanosyltransferase Back     alignment and domain information
>gnl|CDD|185684 cd02175, GH16_lichenase, lichenase, member of glycosyl hydrolase family 16 Back     alignment and domain information
>gnl|CDD|185683 cd00413, Glyco_hydrolase_16, glycosyl hydrolase family 16 Back     alignment and domain information
>gnl|CDD|225182 COG2273, SKN1, Beta-glucanase/Beta-glucan synthetase [Carbohydrate transport and metabolism] Back     alignment and domain information
>gnl|CDD|219239 pfam06955, XET_C, Xyloglucan endo-transglycosylase (XET) C-terminus Back     alignment and domain information
>gnl|CDD|185693 cd08023, GH16_laminarinase_like, Laminarinase, member of the glycosyl hydrolase family 16 Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 297
PLN03161291 Probable xyloglucan endotransglucosylase/hydrolase 100.0
cd02176263 GH16_XET Xyloglucan endotransglycosylase, member o 100.0
cd02183203 GH16_fungal_CRH1_transglycosylase glycosylphosphat 100.0
cd02175212 GH16_lichenase lichenase, member of glycosyl hydro 100.0
PF00722185 Glyco_hydro_16: Glycosyl hydrolases family 16; Int 100.0
cd00413210 Glyco_hydrolase_16 glycosyl hydrolase family 16. T 100.0
cd08023235 GH16_laminarinase_like Laminarinase, member of the 100.0
cd02178258 GH16_beta_agarase Beta-agarase, member of glycosyl 100.0
cd02177269 GH16_kappa_carrageenase Kappa-carrageenase, member 99.97
cd02180295 GH16_fungal_KRE6_glucanase Saccharomyces cerevisia 99.97
cd02182259 GH16_Strep_laminarinase_like Streptomyces laminari 99.97
cd08024330 GH16_CCF Coelomic cytolytic factor, member of glyc 99.96
cd02179321 GH16_beta_GRP beta-1,3-glucan recognition protein, 99.95
COG2273355 SKN1 Beta-glucanase/Beta-glucan synthetase [Carboh 99.94
PF0695551 XET_C: Xyloglucan endo-transglycosylase (XET) C-te 99.83
PF03935504 SKN1: Beta-glucan synthesis-associated protein (SK 99.59
cd02181293 GH16_fungal_Lam16A_glucanase fungal 1,3(4)-beta-D- 99.47
PF06439185 DUF1080: Domain of Unknown Function (DUF1080); Int 89.54
PF09264198 Sial-lect-inser: Vibrio cholerae sialidase, lectin 87.79
smart00210184 TSPN Thrombospondin N-terminal -like domains. Hepa 87.62
smart00560133 LamGL LamG-like jellyroll fold domain. 87.42
PF13385157 Laminin_G_3: Concanavalin A-like lectin/glucanases 85.2
cd00152201 PTX Pentraxins are plasma proteins characterized b 83.74
>PLN03161 Probable xyloglucan endotransglucosylase/hydrolase protein; Provisional Back     alignment and domain information 
Probab=100.00  E-value=1.4e-87  Score=624.26  Aligned_cols=266  Identities=43%  Similarity=0.878  Sum_probs=248.3

Q ss_pred             ccccccccccccccCCceEEeCCCcEEEEEecCCCcceEEEeeeeEeEEEEEEEEeeCCCCCceEEEEEeeecCCCCCCC
Q 022405           28 SKGSFEDNFSIMWSENHFTTSEDGQIWFLSLDKETGCGFQTKQRYRFGWFSMKLKLVGGDSAGVVTAYYMCTENGAGPTR  107 (297)
Q Consensus        28 ~~~~f~~~f~~~w~~~nv~~~~~G~~l~L~ld~~sGs~i~Sk~~~~YG~~EariKlp~g~s~G~v~AFwl~s~~~~~~~~  107 (297)
                      +..+|.++|.++|+.+|+.+.++|+.|+|+||+.+|++|+||+.|+||+||||||||+|+++|+||||||++.   ++.|
T Consensus        23 ~~~~f~~~~~~~w~~~~~~~~~~g~~l~L~ld~~sgs~~~Sk~~f~yGr~E~riKLp~G~saG~v~AFwl~s~---~~~~   99 (291)
T PLN03161         23 VEADFSKSMYFTWGADHSSMLGNGDNLQLVLDQSSGSGIKSKRAFLFGSIEMLIKLVPGNSAGTVTAYYLSST---GSRH   99 (291)
T ss_pred             ccccccccceeeEcCCcEEEeCCCCEEEEEEeCCccCcEEecceEEEEEEEEEEEeCCCCCCCeEEEEEecCC---CCCC
Confidence            4567999999999999999988888899999999999999999999999999999999888999999999986   4589


Q ss_pred             ceeeEEecCCCCCCccEEEeeEEeCCCCCcceeEeccCCCCCCcEEEEEEEcCceEEEEecCEEEEEEecCCCCCCCCCC
Q 022405          108 DELDFEFLGNRTGQPYLIQTNIYKNGTGNREMRHMLWFDPTQDYHTYSILWNNHQIVFFVDRVPIRVFKNNGKANDFFPN  187 (297)
Q Consensus       108 dEIDiE~lGn~~g~p~~~qTNv~~~G~g~re~~~~l~fdp~~dfHtY~i~Wtp~~I~fyVDG~~vr~~~~~~~~g~~~P~  187 (297)
                      |||||||||+++++|+++|||+|.+|.++|++++.++|||+++||+|+|+|+|++|+|||||++||++++.+..|.+||+
T Consensus       100 dEIDiEfLG~~~g~~~~vqtN~y~~g~g~re~~~~l~fDpt~dFHtYsI~Wtp~~I~wyVDG~~iRt~~~~~~~g~~yP~  179 (291)
T PLN03161        100 DEIDFEFLGNVSGQPYTIHTNIYTQGNGSREQQFRPWFDPTADFHNYTIHWNPSEVVWYVDGTPIRVFRNYENEGIAYPN  179 (291)
T ss_pred             CeEEEEecCCCCCCceEEEeceEeCCcCCcceeccccCCCccCcEEEEEEEchhhEEEEECCEEEEEEEcccccCCcCCC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999987777889998


Q ss_pred             CCceEEEEEeeeCCCcccCCCCcccCCCCCCeEEEEcEEEEEEeecCCC--CCCCCCCCCcccccccCCCCCCHHHHHHH
Q 022405          188 EKPMYLFSSIWNADEWATRGGLEKTDWKKAPFVSSYKDFSVDGCQWEDP--YPECVSTTTKNWWDQYDAWHLSDSQKLDH  265 (297)
Q Consensus       188 ~~Pm~l~lnlW~gg~Wat~GG~~~~d~~~~Pf~a~~~~~~v~~c~~~~~--~~~C~~~~~~~~~~~~~~~~l~~~~~~~~  265 (297)
                      ++||+|++|||+|++|||+||++||||+++||+|.|++|++++|..+++  ...|...+...||+++.|++|+++|+++|
T Consensus       180 ~~pM~i~~siW~g~~wAt~gG~~kidw~~aPf~a~~~~f~~~~C~~~~~~~~~~c~~~~~~~~~~~~~~~~l~~~~~~~~  259 (291)
T PLN03161        180 KQGMRVYSSLWNADNWATQGGRVKIDWTLAPFVARGRRFRARACKWNGPVSIKQCADPTPSNWWTSPSYSQLTNAQLTQM  259 (291)
T ss_pred             ccceEEEEeeecCCCcccCCCceeccCCcCCeeEEeeeEEEEeeccCCCCCccccCCCCccccccCccccCCCHHHHHHH
Confidence            7899999999999999999999999999999999999999999987653  34697432467999999999999999999


Q ss_pred             HHHHhCCeeEecccCCCCCCC-CCCCCCCCCC
Q 022405          266 AWVLRNLVIYDYCKDTERFPT-LPVECSLSPW  296 (297)
Q Consensus       266 ~~~~~~~~~y~yc~d~~r~~~-~~~ec~~~~~  296 (297)
                      +|||+||||||||+|++|||+ +||||.+++|
T Consensus       260 ~~v~~~~m~Y~YC~D~~R~~~~~p~EC~~~~~  291 (291)
T PLN03161        260 KKVRDNFMIYDYCKDTKRFNGVMPPECFKPQF  291 (291)
T ss_pred             HHHHhCcEEEeccCCCCcCCCCcCcccCCCcC
Confidence            999999999999999999998 8999999875

>cd02176 GH16_XET Xyloglucan endotransglycosylase, member of glycosyl hydrolase family 16 Back     alignment and domain information
>cd02183 GH16_fungal_CRH1_transglycosylase glycosylphosphatidylinositol-glucanosyltransferase Back     alignment and domain information
>cd02175 GH16_lichenase lichenase, member of glycosyl hydrolase family 16 Back     alignment and domain information
>PF00722 Glyco_hydro_16: Glycosyl hydrolases family 16; InterPro: IPR000757 O-Glycosyl hydrolases 3 Back     alignment and domain information
>cd00413 Glyco_hydrolase_16 glycosyl hydrolase family 16 Back     alignment and domain information
>cd08023 GH16_laminarinase_like Laminarinase, member of the glycosyl hydrolase family 16 Back     alignment and domain information
>cd02178 GH16_beta_agarase Beta-agarase, member of glycosyl hydrolase family 16 Back     alignment and domain information
>cd02177 GH16_kappa_carrageenase Kappa-carrageenase, member of glycosyl hydrolase family 16 Back     alignment and domain information
>cd02180 GH16_fungal_KRE6_glucanase Saccharomyces cerevisiae KRE6 and related glucanses, member of glycosyl hydrolase family 16 Back     alignment and domain information
>cd02182 GH16_Strep_laminarinase_like Streptomyces laminarinase-like, member of glycosyl hydrolase family 16 Back     alignment and domain information
>cd08024 GH16_CCF Coelomic cytolytic factor, member of glycosyl hydrolase family 16 Back     alignment and domain information
>cd02179 GH16_beta_GRP beta-1,3-glucan recognition protein, member of glycosyl hydrolase family 16 Back     alignment and domain information
>COG2273 SKN1 Beta-glucanase/Beta-glucan synthetase [Carbohydrate transport and metabolism] Back     alignment and domain information
>PF06955 XET_C: Xyloglucan endo-transglycosylase (XET) C-terminus; InterPro: IPR010713 This entry represents the C terminus (approximately 60 residues) of plant xyloglucan endo-transglycosylase (XET) Back     alignment and domain information
>PF03935 SKN1: Beta-glucan synthesis-associated protein (SKN1); InterPro: IPR005629 This family consists of the beta-glucan synthesis-associated proteins KRE6 and SKN1 Back     alignment and domain information
>cd02181 GH16_fungal_Lam16A_glucanase fungal 1,3(4)-beta-D-glucanases, similar to Phanerochaete chrysosporium laminarinase 16A Back     alignment and domain information
>PF06439 DUF1080: Domain of Unknown Function (DUF1080); InterPro: IPR010496 This is a family of proteins of unknown function Back     alignment and domain information
>PF09264 Sial-lect-inser: Vibrio cholerae sialidase, lectin insertion; InterPro: IPR015344 This domain is predominantly found in Vibrio cholerae sialidase, and adopt a beta sandwich structure consisting of 12-14 strands arranged in two beta-sheets Back     alignment and domain information
>smart00210 TSPN Thrombospondin N-terminal -like domains Back     alignment and domain information
>smart00560 LamGL LamG-like jellyroll fold domain Back     alignment and domain information
>PF13385 Laminin_G_3: Concanavalin A-like lectin/glucanases superfamily; PDB: 4DQA_A 1N1Y_A 1MZ6_A 1MZ5_A 1N1S_A 2A75_A 1WCS_A 1N1T_A 1N1V_A 2FHR_A Back     alignment and domain information
>cd00152 PTX Pentraxins are plasma proteins characterized by their pentameric discoid assembly and their Ca2+ dependent ligand binding, such as Serum amyloid P component (SAP) and C-reactive Protein (CRP), which are cytokine-inducible acute-phase proteins implicated in innate immunity Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query297
1umz_A278 Xyloglucan Endotransglycosylase In Complex With The 3e-74
2vh9_A290 Crystal Structure Of Nxg1-Deltayniig In Complex Wit 6e-50
2uwb_A267 Crystal Structure Of The Nasturtium Seedling Mutant 9e-50
2uwa_A274 Crystal Structure Of The Nasturtium Seedling Xylogl 6e-48
2uwc_A271 Crystal Structure Of Nasturtium Xyloglucan Hydrolas 7e-48
3d6e_A201 Crystal Structure Of The Engineered 1,3-1,4-Beta-Gl 2e-12
3i4i_A234 Crystal Structure Of A Prokaryotic Beta-1,3-1,4-Glu 2e-10
1mac_A212 Crystal Structure And Site-Directed Mutagenesis Of 5e-10
1gbg_A214 Bacillus Licheniformis Beta-Glucanase Length = 214 5e-10
1byh_A214 Molecular And Active-Site Structure Of A Bacillus ( 7e-10
3o5s_A238 Crystal Structure Of The Endo-Beta-1,3-1,4 Glucanas 1e-09
1cpn_A208 Native-Like In Vivo Folding Of A Circularly Permute 3e-09
1axk_A 394 Engineered Bacillus Bifunctional Enzyme Gluxyn-1 Le 3e-09
1u0a_A214 Crystal Structure Of The Engineered Beta-1,3-1,4-En 4e-09
1cpm_A214 Native-Like In Vivo Folding Of A Circularly Permute 4e-09
1ajk_A214 Circularly Permuted (1-3,1-4)-Beta-D-Glucan 4- Gluc 5e-08
>pdb|1UMZ|A Chain A, Xyloglucan Endotransglycosylase In Complex With The Xyloglucan Nonasaccharide Xllg. Length = 278 Back     alignment and structure 
Iteration: 1

 Score =  275 bits (702), Expect = 3e-74,   Method: Compositional matrix adjust.
 Identities = 134/261 (51%), Positives = 174/261 (66%), Gaps = 4/261 (1%)
Query: 31  SFEDNFSIMWSENHFTTSEDGQIWFLSLDKETGCGFQTKQRYRFGWFSMKLKLVGGDSAG 90
           +F  N+   W+ +H      G    L LDK TG GFQ+K  Y FG FSM++KLV GDSAG
Sbjct: 16  AFGRNYVPTWAFDHIKYFNGGNEIQLHLDKYTGTGFQSKGSYLFGHFSMQMKLVPGDSAG 75
Query: 91  VVTAYYMCTENGAGPTRDELDFEFLGNRTGQPYLIQTNIYKNGTGNREMRHMLWFDPTQD 150
            VTA+Y+ ++N      DE+DFEFLGNRTGQPY++QTN++  G G+RE R  LWFDPT++
Sbjct: 76  TVTAFYLSSQNSE---HDEIDFEFLGNRTGQPYILQTNVFTGGKGDREQRIYLWFDPTKE 132
Query: 151 YHTYSILWNNHQIVFFVDRVPIRVFKNNGKANDFFPNEKPMYLFSSIWNADEWATRGGLE 210
           +H YS+LWN + IVF VD VPIRVFKN       FP  +PM ++SS+WNAD+WATRGGLE
Sbjct: 133 FHYYSVLWNMYMIVFLVDDVPIRVFKNCKDLGVKFPFNQPMKIYSSLWNADDWATRGGLE 192
Query: 211 KTDWKKAPFVSSYKDFSVDGCQWEDPYPECVSTTTKNWWDQYDAWHLSDSQKLDHAWVLR 270
           KTDW KAPF++SY+ F +DGC+       C +T    WWDQ +   L   Q    +WV +
Sbjct: 193 KTDWSKAPFIASYRSFHIDGCEASVEAKFC-ATQGARWWDQKEFQDLDAFQYRRLSWVRQ 251
Query: 271 NLVIYDYCKDTERFPTLPVEC 291
              IY+YC D  R+P++P EC
Sbjct: 252 KYTIYNYCTDRSRYPSMPPEC 272
>pdb|2VH9|A Chain A, Crystal Structure Of Nxg1-Deltayniig In Complex With Xllg, A Xyloglucan Derived Oligosaccharide Length = 290 Back     alignment and structure
>pdb|2UWB|A Chain A, Crystal Structure Of The Nasturtium Seedling Mutant Xyloglucanase Isoform Nxg1-Delta-Yniig Length = 267 Back     alignment and structure
>pdb|2UWA|A Chain A, Crystal Structure Of The Nasturtium Seedling Xyloglucanase Isoform Nxg1 Length = 274 Back     alignment and structure
>pdb|2UWC|A Chain A, Crystal Structure Of Nasturtium Xyloglucan Hydrolase Isoform Nxg2 Length = 271 Back     alignment and structure
>pdb|3D6E|A Chain A, Crystal Structure Of The Engineered 1,3-1,4-Beta-Glucanase Protein From Bacillus Licheniformis Length = 201 Back     alignment and structure
>pdb|3I4I|A Chain A, Crystal Structure Of A Prokaryotic Beta-1,3-1,4-Glucanase (Lichenase) Derived From A Mouse Hindgut Metagenome Length = 234 Back     alignment and structure
>pdb|1MAC|A Chain A, Crystal Structure And Site-Directed Mutagenesis Of Bacillus Macerans Endo-1,3-1,4-Beta-Glucanase Length = 212 Back     alignment and structure
>pdb|1GBG|A Chain A, Bacillus Licheniformis Beta-Glucanase Length = 214 Back     alignment and structure
>pdb|1BYH|A Chain A, Molecular And Active-Site Structure Of A Bacillus (1-3,1-4)- Beta-Glucanase Length = 214 Back     alignment and structure
>pdb|3O5S|A Chain A, Crystal Structure Of The Endo-Beta-1,3-1,4 Glucanase From Bacillus Subtilis (Strain 168) Length = 238 Back     alignment and structure
>pdb|1CPN|A Chain A, Native-Like In Vivo Folding Of A Circularly Permuted Jellyroll Protein Shown By Crystal Structure Analysis Length = 208 Back     alignment and structure
>pdb|1AXK|A Chain A, Engineered Bacillus Bifunctional Enzyme Gluxyn-1 Length = 394 Back     alignment and structure
>pdb|1U0A|A Chain A, Crystal Structure Of The Engineered Beta-1,3-1,4-Endoglucanase H(A16- M) In Complex With Beta-Glucan Tetrasaccharide Length = 214 Back     alignment and structure
>pdb|1CPM|A Chain A, Native-Like In Vivo Folding Of A Circularly Permuted Jellyroll Protein Shown By Crystal Structure Analysis Length = 214 Back     alignment and structure
>pdb|1AJK|A Chain A, Circularly Permuted (1-3,1-4)-Beta-D-Glucan 4- Glucanohydrolase Cpa16m-84 Length = 214 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query297
1umz_A278 Xyloglucan endotransglycosylase; glycoside hydrola 1e-100
2uwa_A274 Cellulase; glycoside hydrolase, xyloglucan-endo-tr 6e-86
3o5s_A238 Beta-glucanase; glycosyl hydrolase, beta-jelly rol 2e-61
2ayh_A214 1,3-1,4-beta-D-glucan 4-glucanohydrolase; hydrolas 2e-59
1cpn_A208 Circularly permuted; hydrolase(glucanase); 1.80A { 4e-59
3i4i_A234 1,3-1,4-beta-glucanase; beta-sandwich, hydrolase; 2e-55
1axk_A 394 Gluxyn-1; bifunctional, fusion protein, 1,4-beta-x 6e-52
1ajk_A214 CPA16M-84, circularly permuted (1-3,1-4)-beta-D-gl 2e-48
3h0o_A240 Beta-glucanase; 1,3-1,4-beta-D-glucanase, CH-PI st 1e-45
1ajo_A214 CPA16M-127, circularly permuted (1-3,1-4)-beta-D-g 4e-20
1ajo_A214 CPA16M-127, circularly permuted (1-3,1-4)-beta-D-g 4e-13
3juu_A280 Porphyranase B; glycoside hydrolase family GH16, b 2e-08
1dyp_A271 Kappa-carrageenase; hydrolase, kappa-carrageenan d 7e-08
3azy_A272 Laminarinase; beta-jelly roll fold, glycosyl hydro 2e-07
2vy0_A264 Endo-beta-1,3-glucanase; hydrolase, laminarin, end 7e-07
2hyk_A245 Beta-1,3-glucanase; family 16, beta-jelly roll, ba 1e-06
4ate_A266 Beta-porphyranase A; hydrolase, AGAR degradation; 2e-06
4awd_A324 Beta-porphyranase; hydrolase; 2.40A {Bacteroides p 3e-06
1ups_A420 Glcnac-alpha-1,4-GAL-releasing endo-beta- galactos 1e-05
3rq0_A269 Glycosyl hydrolases family protein 16; structural 5e-05
4asm_B363 Beta-agarase D; hydrolase, glycoside hydrolase, en 6e-05
3iln_A251 Laminarinase; jelly ROW, hydrolase, family 16 glyc 2e-04
1o4y_A288 Beta-agarase A; glycoside hydrolase family 16, aga 9e-04
>1umz_A Xyloglucan endotransglycosylase; glycoside hydrolase, XET, XTH, XEH, transglycosylation, transferase, glycosyltransferase; HET: NAG BMA BGC GAL; 1.8A {Populus tremula} SCOP: b.29.1.2 PDB: 1un1_A* Length = 278 Back     alignment and structure
 Score =  293 bits (752), Expect = e-100
 Identities = 134/277 (48%), Positives = 175/277 (63%), Gaps = 4/277 (1%)

Query: 18  TYYASEAAATSKGSFEDNFSIMWSENHFTTSEDGQIWFLSLDKETGCGFQTKQRYRFGWF 77
           T   +        +F  N+   W+ +H      G    L LDK TG GFQ+K  Y FG F
Sbjct: 3   TAAFAALRKPVDVAFGRNYVPTWAFDHIKYFNGGNEIQLHLDKYTGTGFQSKGSYLFGHF 62

Query: 78  SMKLKLVGGDSAGVVTAYYMCTENGAGPTRDELDFEFLGNRTGQPYLIQTNIYKNGTGNR 137
           SM++KLV GDSAG VTA+Y+ ++       DE+DFEFLGNRTGQPY++QTN++  G G+R
Sbjct: 63  SMQMKLVPGDSAGTVTAFYLSSQ---NSEHDEIDFEFLGNRTGQPYILQTNVFTGGKGDR 119

Query: 138 EMRHMLWFDPTQDYHTYSILWNNHQIVFFVDRVPIRVFKNNGKANDFFPNEKPMYLFSSI 197
           E R  LWFDPT+++H YS+LWN + IVF VD VPIRVFKN       FP  +PM ++SS+
Sbjct: 120 EQRIYLWFDPTKEFHYYSVLWNMYMIVFLVDDVPIRVFKNCKDLGVKFPFNQPMKIYSSL 179

Query: 198 WNADEWATRGGLEKTDWKKAPFVSSYKDFSVDGCQWEDPYPECVSTTTKNWWDQYDAWHL 257
           WNAD+WATRGGLEKTDW KAPF++SY+ F +DGC+       C +T    WWDQ +   L
Sbjct: 180 WNADDWATRGGLEKTDWSKAPFIASYRSFHIDGCEASVEAKFC-ATQGARWWDQKEFQDL 238

Query: 258 SDSQKLDHAWVLRNLVIYDYCKDTERFPTLPVECSLS 294
              Q    +WV +   IY+YC D  R+P++P EC   
Sbjct: 239 DAFQYRRLSWVRQKYTIYNYCTDRSRYPSMPPECKRD 275
>2uwa_A Cellulase; glycoside hydrolase, xyloglucan-endo-transferase, hydrolase, glycosidase, family GH16, tropaeolum majus xyloglucanase; 1.8A {Tropaeolum majus} PDB: 2uwc_A 2uwb_A 2vh9_A* Length = 274 Back     alignment and structure
>3o5s_A Beta-glucanase; glycosyl hydrolase, beta-jelly roll, hydrolase; HET: B3P; 2.20A {Bacillus subtilis} PDB: 3d6e_A Length = 238 Back     alignment and structure
>2ayh_A 1,3-1,4-beta-D-glucan 4-glucanohydrolase; hydrolase (glucanase); 1.60A {Hybrid} SCOP: b.29.1.2 PDB: 1byh_A 1glh_A 1u0a_A* 1mac_A 1gbg_A Length = 214 Back     alignment and structure
>1cpn_A Circularly permuted; hydrolase(glucanase); 1.80A {Paenibacillus macerans} SCOP: b.29.1.2 PDB: 1cpm_A Length = 208 Back     alignment and structure
>3i4i_A 1,3-1,4-beta-glucanase; beta-sandwich, hydrolase; 1.89A {Uncultured murine large bowel bacteriuorganism_taxid} Length = 234 Back     alignment and structure
>1axk_A Gluxyn-1; bifunctional, fusion protein, 1,4-beta-xylanase, 1,3-1,4-beta-glucanase, hybrid enzyme; 2.10A {Bacillus subtilis} SCOP: b.29.1.2 b.29.1.11 Length = 394 Back     alignment and structure
>1ajk_A CPA16M-84, circularly permuted (1-3,1-4)-beta-D-glucan 4- glucanohydrolase; glucanase, circular permutation; HET: EPE; 1.80A {Paenibacillus macerans} SCOP: b.29.1.2 Length = 214 Back     alignment and structure
>3h0o_A Beta-glucanase; 1,3-1,4-beta-D-glucanase, CH-PI stacking interactions, TRIS inhibition, hydrolase, glycosidase; 1.40A {Fibrobacter succinogenes} PDB: 1mve_A 1zm1_A* 2r4a_A 3hr9_A 2r49_A 3axd_A 3axe_A* Length = 240 Back     alignment and structure
>1ajo_A CPA16M-127, circularly permuted (1-3,1-4)-beta-D-glucan 4- glucanohydrolase CPA16M-127; glucanase, circular permutation; 2.07A {Paenibacillus macerans} SCOP: b.29.1.2 Length = 214 Back     alignment and structure
>1ajo_A CPA16M-127, circularly permuted (1-3,1-4)-beta-D-glucan 4- glucanohydrolase CPA16M-127; glucanase, circular permutation; 2.07A {Paenibacillus macerans} SCOP: b.29.1.2 Length = 214 Back     alignment and structure
>3juu_A Porphyranase B; glycoside hydrolase family GH16, beta-sandwich fold, jelly roll, sugar binding protein, hydrolase-carbohydrate complex; HET: MES GOL; 1.80A {Zobellia galactanivorans} Length = 280 Back     alignment and structure
>1dyp_A Kappa-carrageenase; hydrolase, kappa-carrageenan double helix degradation; HET: MSE; 1.54A {Pseudoalteromonas carrageenovora} SCOP: b.29.1.2 Length = 271 Back     alignment and structure
>3azy_A Laminarinase; beta-jelly roll fold, glycosyl hydrolase family 16, laminari endo-1,3-beta-glucanase, hydrolase; 1.65A {Thermotoga maritima} PDB: 3azx_A 3azz_A* 3b00_A* 3b01_A 4dfs_A Length = 272 Back     alignment and structure
>2vy0_A Endo-beta-1,3-glucanase; hydrolase, laminarin, endoglucanase, thermostable protein,; 2.16A {Pyrococcus furiosus} Length = 264 Back     alignment and structure
>2hyk_A Beta-1,3-glucanase; family 16, beta-jelly roll, bacterial endo-beta-1,3-glucanas hydrolase; 1.30A {Nocardiopsis SP} PDB: 3atg_A Length = 245 Back     alignment and structure
>4ate_A Beta-porphyranase A; hydrolase, AGAR degradation; 1.10A {Zobellia galactanivorans} PDB: 3ilf_A* Length = 266 Back     alignment and structure
>4awd_A Beta-porphyranase; hydrolase; 2.40A {Bacteroides plebeius} Length = 324 Back     alignment and structure
>1ups_A Glcnac-alpha-1,4-GAL-releasing endo-beta- galactosidase; endo-galactosidase, glycosyl hydrolase, PSI, protein structure initiative; 1.82A {Clostridium perfringens} SCOP: b.29.1.2 b.42.2.3 Length = 420 Back     alignment and structure
>3rq0_A Glycosyl hydrolases family protein 16; structural genomics, PSI-biology; HET: PG4 211; 2.02A {Mycobacterium smegmatis} Length = 269 Back     alignment and structure
>4asm_B Beta-agarase D; hydrolase, glycoside hydrolase, endo-beta-agarase; 1.50A {Zobellia galactanivorans} Length = 363 Back     alignment and structure
>3iln_A Laminarinase; jelly ROW, hydrolase, family 16 glycosyl hydrolase; 1.95A {Rhodothermus marinus} Length = 251 Back     alignment and structure
>1o4y_A Beta-agarase A; glycoside hydrolase family 16, agarose degradation, cleavage of beta-1, 4-D-galactose linkages; HET: SO4; 1.48A {Zobellia galactanivorans} SCOP: b.29.1.2 PDB: 1urx_A* Length = 288 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query297
1umz_A278 Xyloglucan endotransglycosylase; glycoside hydrola 100.0
2uwa_A274 Cellulase; glycoside hydrolase, xyloglucan-endo-tr 100.0
3o5s_A238 Beta-glucanase; glycosyl hydrolase, beta-jelly rol 100.0
3i4i_A234 1,3-1,4-beta-glucanase; beta-sandwich, hydrolase; 100.0
2ayh_A214 1,3-1,4-beta-D-glucan 4-glucanohydrolase; hydrolas 100.0
1cpn_A208 Circularly permuted; hydrolase(glucanase); 1.80A { 100.0
3iln_A251 Laminarinase; jelly ROW, hydrolase, family 16 glyc 100.0
2hyk_A245 Beta-1,3-glucanase; family 16, beta-jelly roll, ba 100.0
3h0o_A240 Beta-glucanase; 1,3-1,4-beta-D-glucanase, CH-PI st 100.0
1axk_A 394 Gluxyn-1; bifunctional, fusion protein, 1,4-beta-x 100.0
3azy_A272 Laminarinase; beta-jelly roll fold, glycosyl hydro 100.0
3rq0_A269 Glycosyl hydrolases family protein 16; structural 100.0
4ate_A266 Beta-porphyranase A; hydrolase, AGAR degradation; 100.0
3juu_A280 Porphyranase B; glycoside hydrolase family GH16, b 100.0
2vy0_A264 Endo-beta-1,3-glucanase; hydrolase, laminarin, end 100.0
1dyp_A271 Kappa-carrageenase; hydrolase, kappa-carrageenan d 100.0
4awd_A324 Beta-porphyranase; hydrolase; 2.40A {Bacteroides p 100.0
1o4y_A288 Beta-agarase A; glycoside hydrolase family 16, aga 100.0
3dgt_A280 Endo-1,3-beta-glucanase; GHF16, hydrolase, 1; 1.50 100.0
1ups_A420 Glcnac-alpha-1,4-GAL-releasing endo-beta- galactos 100.0
1o4z_A346 Beta-agarase B; glycoside hydrolase family 16, aga 100.0
4atf_A308 Beta-agarase B; hydrolase, polysaccharidase, agaro 99.98
1ajk_A214 CPA16M-84, circularly permuted (1-3,1-4)-beta-D-gl 99.98
4asm_B363 Beta-agarase D; hydrolase, glycoside hydrolase, en 99.94
2w39_A298 Putative laminarinase; hydrolase, white ROT fungus 99.93
1ajo_A214 CPA16M-127, circularly permuted (1-3,1-4)-beta-D-g 99.89
1ajo_A214 CPA16M-127, circularly permuted (1-3,1-4)-beta-D-g 99.79
1ajk_A214 CPA16M-84, circularly permuted (1-3,1-4)-beta-D-gl 97.11
3flp_A217 SAP-like pentraxin; physiological doubly-stacked h 93.04
3pvn_A206 C-reactive protein; pentraxin family, immune syste 80.03
>1umz_A Xyloglucan endotransglycosylase; glycoside hydrolase, XET, XTH, XEH, transglycosylation, transferase, glycosyltransferase; HET: NAG BMA BGC GAL; 1.8A {Populus tremula} SCOP: b.29.1.2 PDB: 1un1_A* Back     alignment and structure
Probab=100.00  E-value=4e-80  Score=574.05  Aligned_cols=264  Identities=50%  Similarity=0.957  Sum_probs=246.0

Q ss_pred             ccccccccccccccccCCceEEeCCCcEEEEEecCCCcceEEEeeeeEeEEEEEEEEeeCCCCCceEEEEEeeecCCCCC
Q 022405           26 ATSKGSFEDNFSIMWSENHFTTSEDGQIWFLSLDKETGCGFQTKQRYRFGWFSMKLKLVGGDSAGVVTAYYMCTENGAGP  105 (297)
Q Consensus        26 ~~~~~~f~~~f~~~w~~~nv~~~~~G~~l~L~ld~~sGs~i~Sk~~~~YG~~EariKlp~g~s~G~v~AFwl~s~~~~~~  105 (297)
                      .+.+.+|.++|+++|+++||++.++|+.|+|+|++.+|++|+||++|+||+||||||+|+|+++|+||||||+++   .|
T Consensus        11 ~~~~~~f~~~~~~~w~~~nv~~~~~G~~l~L~l~~~tsa~i~Sk~~f~YGr~Ear~Klp~g~s~G~wpAfwll~~---~p   87 (278)
T 1umz_A           11 KPVDVAFGRNYVPTWAFDHIKYFNGGNEIQLHLDKYTGTGFQSKGSYLFGHFSMQMKLVPGDSAGTVTAFYLSSQ---NS   87 (278)
T ss_dssp             -CCCCCHHHHEEEEECGGGEEEEGGGTEEEEEECSSCCEEEEESSCEEEEEEEEEEECCCSCCTTEEEEEEEECS---SS
T ss_pred             cccCCcccCCceeeECCCCEEEeCCCCEEEEEECCCccCEEEECcEEECEEEEEEEEeCCCCCCceEEEEEEecC---CC
Confidence            456789999999999999999988888899999999999999999999999999999999888999999999998   47


Q ss_pred             CCceeeEEecCCCCCCccEEEeeEEeCCCCCcceeEeccCCCCCCcEEEEEEEcCceEEEEecCEEEEEEecCCCCCCCC
Q 022405          106 TRDELDFEFLGNRTGQPYLIQTNIYKNGTGNREMRHMLWFDPTQDYHTYSILWNNHQIVFFVDRVPIRVFKNNGKANDFF  185 (297)
Q Consensus       106 ~~dEIDiE~lGn~~g~p~~~qTNv~~~G~g~re~~~~l~fdp~~dfHtY~i~Wtp~~I~fyVDG~~vr~~~~~~~~g~~~  185 (297)
                      .++|||||++|+++++|+++|||+|.+|.+++++++.+++|++++||+|+|+|+|++|+|||||+++|++++.+..+.+|
T Consensus        88 ~~gEIDmE~lG~~~g~~~tvhtn~~~~g~~~~~~~~~l~~d~~~dFHtY~i~Wtp~~I~fyVDG~~v~t~~~~~~~g~~~  167 (278)
T 1umz_A           88 EHDEIDFEFLGNRTGQPYILQTNVFTGGKGDREQRIYLWFDPTKEFHYYSVLWNMYMIVFLVDDVPIRVFKNCKDLGVKF  167 (278)
T ss_dssp             SCCEEEEEEECCSTTSCCEEEEEEEBTTBCCCCEEECCSSCTTTSCEEEEEEECSSEEEEEETTEEEEEEECCGGGTCCC
T ss_pred             CCCeEEEEEeCCCCCCceEEEEEEecCCCCCCcceEecCCCCccCcEEEEEEEecCeEEEEECCeEEEEEecCcCcCccC
Confidence            89999999999998899999999999999899999999999999999999999999999999999999999876667789


Q ss_pred             CCCCceEEEEEeeeCCCcccCCCCcccCCCCCCeEEEEcEEEEEEeecCCCCCCCCCCCCcccccccCCCCCCHHHHHHH
Q 022405          186 PNEKPMYLFSSIWNADEWATRGGLEKTDWKKAPFVSSYKDFSVDGCQWEDPYPECVSTTTKNWWDQYDAWHLSDSQKLDH  265 (297)
Q Consensus       186 P~~~Pm~l~lnlW~gg~Wat~GG~~~~d~~~~Pf~a~~~~~~v~~c~~~~~~~~C~~~~~~~~~~~~~~~~l~~~~~~~~  265 (297)
                      |+++||+|+||||+||+|+++||++++||+++||+++|+.+++++|..+.+...|.. +...||+++.+++|+++|+++|
T Consensus       168 Pf~~P~~lilnlw~GG~Wa~~gG~~~~d~~~~p~v~~vr~~~~~~c~~~~~~~~c~~-~~~~~~~~~~~~~l~~~~~~~~  246 (278)
T 1umz_A          168 PFNQPMKIYSSLWNADDWATRGGLEKTDWSKAPFIASYRSFHIDGCEASVEAKFCAT-QGARWWDQKEFQDLDAFQYRRL  246 (278)
T ss_dssp             SCSSCBEEEEEEEECTTTSSGGGTSCCCGGGCCEEEEEEEEEEEEEECCSSSCCCTT-TTCSGGGSGGGSSCCHHHHHHH
T ss_pred             cCCCceEEEEEEEECCcccCCCCccccCCCCCCEEEEEEEEEEecccCCCCCCccCC-CcccccccCccccCCHHHHHHH
Confidence            977999999999999999999998899999999999999999999997644456974 3456999999999999999999


Q ss_pred             HHHHhCCeeEecccCCCCCCCCCCCCCC
Q 022405          266 AWVLRNLVIYDYCKDTERFPTLPVECSL  293 (297)
Q Consensus       266 ~~~~~~~~~y~yc~d~~r~~~~~~ec~~  293 (297)
                      +|||+||||||||+|++|||++||||.+
T Consensus       247 ~~~~~~~~~y~yc~d~~r~~~~~~ec~~  274 (278)
T 1umz_A          247 SWVRQKYTIYNYCTDRSRYPSMPPECKR  274 (278)
T ss_dssp             HHHHHHTEEEEGGGCTTTCSSCCTHHHH
T ss_pred             HHHHHCCeEEecCCCCCcCCCCCcccCC
Confidence            9999999999999999999999999964
>2uwa_A Cellulase; glycoside hydrolase, xyloglucan-endo-transferase, hydrolase, glycosidase, family GH16, tropaeolum majus xyloglucanase; 1.8A {Tropaeolum majus} PDB: 2uwc_A 2uwb_A 2vh9_A* Back     alignment and structure
>3o5s_A Beta-glucanase; glycosyl hydrolase, beta-jelly roll, hydrolase; HET: B3P; 2.20A {Bacillus subtilis} PDB: 3d6e_A Back     alignment and structure
>3i4i_A 1,3-1,4-beta-glucanase; beta-sandwich, hydrolase; 1.89A {Uncultured murine large bowel bacteriuorganism_taxid} Back     alignment and structure
>2ayh_A 1,3-1,4-beta-D-glucan 4-glucanohydrolase; hydrolase (glucanase); 1.60A {Hybrid} SCOP: b.29.1.2 PDB: 1byh_A 1glh_A 1u0a_A* 1mac_A 1gbg_A Back     alignment and structure
>1cpn_A Circularly permuted; hydrolase(glucanase); 1.80A {Paenibacillus macerans} SCOP: b.29.1.2 PDB: 1cpm_A Back     alignment and structure
>3iln_A Laminarinase; jelly ROW, hydrolase, family 16 glycosyl hydrolase; 1.95A {Rhodothermus marinus} Back     alignment and structure
>2hyk_A Beta-1,3-glucanase; family 16, beta-jelly roll, bacterial endo-beta-1,3-glucanas hydrolase; 1.30A {Nocardiopsis SP} PDB: 3atg_A Back     alignment and structure
>3h0o_A Beta-glucanase; 1,3-1,4-beta-D-glucanase, CH-PI stacking interactions, TRIS inhibition, hydrolase, glycosidase; 1.40A {Fibrobacter succinogenes} SCOP: b.29.1.2 PDB: 1mve_A 1zm1_A* 2r4a_A 3hr9_A 2r49_A 3axd_A 3axe_A* Back     alignment and structure
>1axk_A Gluxyn-1; bifunctional, fusion protein, 1,4-beta-xylanase, 1,3-1,4-beta-glucanase, hybrid enzyme; 2.10A {Bacillus subtilis} SCOP: b.29.1.2 b.29.1.11 Back     alignment and structure
>3azy_A Laminarinase; beta-jelly roll fold, glycosyl hydrolase family 16, laminari endo-1,3-beta-glucanase, hydrolase; 1.65A {Thermotoga maritima} PDB: 3azx_A 3azz_A* 3b00_A* 3b01_A 4dfs_A Back     alignment and structure
>3rq0_A Glycosyl hydrolases family protein 16; structural genomics, PSI-biology; HET: PG4 211; 2.02A {Mycobacterium smegmatis} Back     alignment and structure
>4ate_A Beta-porphyranase A; hydrolase, AGAR degradation; 1.10A {Zobellia galactanivorans} PDB: 3ilf_A* Back     alignment and structure
>3juu_A Porphyranase B; glycoside hydrolase family GH16, beta-sandwich fold, jelly roll, sugar binding protein, hydrolase-carbohydrate complex; HET: MES GOL; 1.80A {Zobellia galactanivorans} Back     alignment and structure
>2vy0_A Endo-beta-1,3-glucanase; hydrolase, laminarin, endoglucanase, thermostable protein,; 2.16A {Pyrococcus furiosus} Back     alignment and structure
>1dyp_A Kappa-carrageenase; hydrolase, kappa-carrageenan double helix degradation; HET: MSE; 1.54A {Pseudoalteromonas carrageenovora} SCOP: b.29.1.2 Back     alignment and structure
>4awd_A Beta-porphyranase; hydrolase; 2.40A {Bacteroides plebeius} Back     alignment and structure
>1o4y_A Beta-agarase A; glycoside hydrolase family 16, agarose degradation, cleavage of beta-1, 4-D-galactose linkages; HET: SO4; 1.48A {Zobellia galactanivorans} SCOP: b.29.1.2 PDB: 1urx_A* Back     alignment and structure
>3dgt_A Endo-1,3-beta-glucanase; GHF16, hydrolase, 1; 1.50A {Streptomyces sioyaensis} Back     alignment and structure
>1ups_A Glcnac-alpha-1,4-GAL-releasing endo-beta- galactosidase; endo-galactosidase, glycosyl hydrolase, PSI, protein structure initiative; 1.82A {Clostridium perfringens} SCOP: b.29.1.2 b.42.2.3 Back     alignment and structure
>1o4z_A Beta-agarase B; glycoside hydrolase family 16, agarose degradation, cleavage of beta-1, 4-D-galactose linkages; HET: EPE; 2.30A {Zobellia galactanivorans} SCOP: b.29.1.2 Back     alignment and structure
>4atf_A Beta-agarase B; hydrolase, polysaccharidase, agarolytic enzyme; HET: AAL GAL; 1.90A {Zobellia galactanivorans} Back     alignment and structure
>1ajk_A CPA16M-84, circularly permuted (1-3,1-4)-beta-D-glucan 4- glucanohydrolase; glucanase, circular permutation; HET: EPE; 1.80A {Paenibacillus macerans} SCOP: b.29.1.2 Back     alignment and structure
>4asm_B Beta-agarase D; hydrolase, glycoside hydrolase, endo-beta-agarase; 1.50A {Zobellia galactanivorans} Back     alignment and structure
>2w39_A Putative laminarinase; hydrolase, white ROT fungus, glycosyl hydrolase, GH7, GH16, LAM16A, family 16, beta-glucan, basidiomycete; HET: NAG BGC LGC; 1.10A {Phanerochaete chrysosporium} PDB: 2cl2_A* 2w52_A* 2wlq_A* 2wne_A* Back     alignment and structure
>1ajo_A CPA16M-127, circularly permuted (1-3,1-4)-beta-D-glucan 4- glucanohydrolase CPA16M-127; glucanase, circular permutation; 2.07A {Paenibacillus macerans} SCOP: b.29.1.2 Back     alignment and structure
>1ajo_A CPA16M-127, circularly permuted (1-3,1-4)-beta-D-glucan 4- glucanohydrolase CPA16M-127; glucanase, circular permutation; 2.07A {Paenibacillus macerans} SCOP: b.29.1.2 Back     alignment and structure
>1ajk_A CPA16M-84, circularly permuted (1-3,1-4)-beta-D-glucan 4- glucanohydrolase; glucanase, circular permutation; HET: EPE; 1.80A {Paenibacillus macerans} SCOP: b.29.1.2 Back     alignment and structure
>3flp_A SAP-like pentraxin; physiological doubly-stacked heptamer, pentraxin fold, cyclic heptamer, invertebrate lectin, sugar binding protein; 2.30A {Limulus polyphemus} PDB: 3flr_A 3flt_A Back     alignment and structure
>3pvn_A C-reactive protein; pentraxin family, immune system; 1.98A {Homo sapiens} SCOP: b.29.1.5 PDB: 1gnh_A 1lj7_A 3l2y_A 1b09_A 3pvo_A Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 297
d1umza_267 b.29.1.2 (A:) Xyloglucan endotransglycosylase {Eur 8e-92
d1ajka_214 b.29.1.2 (A:) Bacillus 1-3,1-4-beta-glucanase {Bac 1e-40
d1mvea_243 b.29.1.2 (A:) Bacillus 1-3,1-4-beta-glucanase {Fib 1e-26
d2ayha_214 b.29.1.2 (A:) Bacillus 1-3,1-4-beta-glucanase {syn 3e-16
d1dypa_271 b.29.1.2 (A:) kappa-Carrageenase, catalytic {Pseud 3e-08
d1upsa1266 b.29.1.2 (A:19-284) GlcNAc-alpha-1,4-Gal-releasing 4e-04
d1o4ya_270 b.29.1.2 (A:) beta-Agarase A {Zobellia galactanivo 0.002
>d1umza_ b.29.1.2 (A:) Xyloglucan endotransglycosylase {European aspen (Populus tremula) [TaxId: 113636]} Length = 267 Back     information, alignment and structure

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Glycosyl hydrolases family 16
domain: Xyloglucan endotransglycosylase
species: European aspen (Populus tremula) [TaxId: 113636]

 Score =  271 bits (694), Expect = 8e-92
 Identities = 133/264 (50%), Positives = 173/264 (65%), Gaps = 4/264 (1%)

Query: 31  SFEDNFSIMWSENHFTTSEDGQIWFLSLDKETGCGFQTKQRYRFGWFSMKLKLVGGDSAG 90
           +F  N+   W+ +H      G    L LDK TG GFQ+K  Y FG FSM++KLV GDSAG
Sbjct: 5   AFGRNYVPTWAFDHIKYFNGGNEIQLHLDKYTGTGFQSKGSYLFGHFSMQMKLVPGDSAG 64

Query: 91  VVTAYYMCTENGAGPTRDELDFEFLGNRTGQPYLIQTNIYKNGTGNREMRHMLWFDPTQD 150
            VTA+Y+ ++       DE+DFEFLGNRTGQPY++QTN++  G G+RE R  LWFDPT++
Sbjct: 65  TVTAFYLSSQ---NSEHDEIDFEFLGNRTGQPYILQTNVFTGGKGDREQRIYLWFDPTKE 121

Query: 151 YHTYSILWNNHQIVFFVDRVPIRVFKNNGKANDFFPNEKPMYLFSSIWNADEWATRGGLE 210
           +H YS+LWN + IVF VD VPIRVFKN       FP  +PM ++SS+WNAD+WATRGGLE
Sbjct: 122 FHYYSVLWNMYMIVFLVDDVPIRVFKNCKDLGVKFPFNQPMKIYSSLWNADDWATRGGLE 181

Query: 211 KTDWKKAPFVSSYKDFSVDGCQWEDPYPECVSTTTKNWWDQYDAWHLSDSQKLDHAWVLR 270
           KTDW KAPF++SY+ F +DGC+       C +T    WWDQ +   L   Q    +WV +
Sbjct: 182 KTDWSKAPFIASYRSFHIDGCEASVEAKFC-ATQGARWWDQKEFQDLDAFQYRRLSWVRQ 240

Query: 271 NLVIYDYCKDTERFPTLPVECSLS 294
              IY+YC D  R+P++P EC   
Sbjct: 241 KYTIYNYCTDRSRYPSMPPECKRD 264
>d1ajka_ b.29.1.2 (A:) Bacillus 1-3,1-4-beta-glucanase {Bacillus macerans [TaxId: 44252]} Length = 214 Back     information, alignment and structure
>d1mvea_ b.29.1.2 (A:) Bacillus 1-3,1-4-beta-glucanase {Fibrobacter succinogenes [TaxId: 833]} Length = 243 Back     information, alignment and structure
>d2ayha_ b.29.1.2 (A:) Bacillus 1-3,1-4-beta-glucanase {synthetic, hybrid between Bacillus amyloliquefaciens and Bacillus macerans proteins} Length = 214 Back     information, alignment and structure
>d1dypa_ b.29.1.2 (A:) kappa-Carrageenase, catalytic {Pseudoalteromonas carrageenovora [TaxId: 227]} Length = 271 Back     information, alignment and structure
>d1upsa1 b.29.1.2 (A:19-284) GlcNAc-alpha-1,4-Gal-releasing endo-beta-galactosidase, GngC, catalytic domain {Clostridium perfringens [TaxId: 1502]} Length = 266 Back     information, alignment and structure
>d1o4ya_ b.29.1.2 (A:) beta-Agarase A {Zobellia galactanivorans [TaxId: 63186]} Length = 270 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query297
d1umza_267 Xyloglucan endotransglycosylase {European aspen (P 100.0
d1ajka_214 Bacillus 1-3,1-4-beta-glucanase {Bacillus macerans 100.0
d2ayha_214 Bacillus 1-3,1-4-beta-glucanase {synthetic, hybrid 100.0
d1mvea_243 Bacillus 1-3,1-4-beta-glucanase {Fibrobacter succi 100.0
d1dypa_271 kappa-Carrageenase, catalytic {Pseudoalteromonas c 99.97
d1o4ya_270 beta-Agarase A {Zobellia galactanivorans [TaxId: 6 99.96
d1upsa1266 GlcNAc-alpha-1,4-Gal-releasing endo-beta-galactosi 99.96
d1o4za_295 beta-Agarase A {Zobellia galactanivorans [TaxId: 6 99.95
d1epwa1218 Botulinum neurotoxin {Clostridium botulinum, serot 92.77
d1a8da1247 Tetanus neurotoxin {Clostridium tetani [TaxId: 151 91.17
d2erfa1206 Thrombospondin 1 N-terminal domain {Human (Homo sa 91.12
d1oq1a_223 Hypothetical protein YesU {Bacillus subtilis [TaxI 89.83
d2slia1196 Leech intramolecular trans-sialidase, N-terminal d 89.46
d1ajka_214 Bacillus 1-3,1-4-beta-glucanase {Bacillus macerans 88.11
d1saca_204 Serum amyloid P component (SAP) {Human (Homo sapie 87.99
d3btaa1207 Botulinum neurotoxin {Clostridium botulinum, serot 86.96
d1w0pa1192 Vibrio cholerae sialidase, N-terminal and insertio 85.23
d1w0pa2197 Vibrio cholerae sialidase, N-terminal and insertio 84.54
d1b09a_206 C-reactive protein (CRP) {Human (Homo sapiens) [Ta 83.63
>d1umza_ b.29.1.2 (A:) Xyloglucan endotransglycosylase {European aspen (Populus tremula) [TaxId: 113636]} Back     information, alignment and structure
class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Glycosyl hydrolases family 16
domain: Xyloglucan endotransglycosylase
species: European aspen (Populus tremula) [TaxId: 113636]

Probab=100.00  E-value=2.5e-82  Score=583.76  Aligned_cols=264  Identities=50%  Similarity=0.958  Sum_probs=249.4

Q ss_pred             ccccccccccccccCCceEEeCCCcEEEEEecCCCcceEEEeeeeEeEEEEEEEEeeCCCCCceEEEEEeeecCCCCCCC
Q 022405           28 SKGSFEDNFSIMWSENHFTTSEDGQIWFLSLDKETGCGFQTKQRYRFGWFSMKLKLVGGDSAGVVTAYYMCTENGAGPTR  107 (297)
Q Consensus        28 ~~~~f~~~f~~~w~~~nv~~~~~G~~l~L~ld~~sGs~i~Sk~~~~YG~~EariKlp~g~s~G~v~AFwl~s~~~~~~~~  107 (297)
                      ...+|+++|.++|+++||++.++|..|+|+||+.+|++|+||++|+||+||||||||+|+++|++++||+++.   ++.+
T Consensus         2 ~~~~f~~~~~~~w~~~~v~~~~~g~~l~l~ld~~sga~i~Sk~~f~YG~~EariKlp~G~g~g~~~~f~~~s~---~~~~   78 (267)
T d1umza_           2 VDVAFGRNYVPTWAFDHIKYFNGGNEIQLHLDKYTGTGFQSKGSYLFGHFSMQMKLVPGDSAGTVTAFYLSSQ---NSEH   78 (267)
T ss_dssp             CCCCHHHHEEEEECGGGEEEEGGGTEEEEEECSSCCEEEEESSCEEEEEEEEEEECCCSCCTTEEEEEEEECS---SSSC
T ss_pred             ccccCCCCceecCCCCCEEEeCCCeEEEEEECCcccCceEecceEEeeEEEEEEEcCCCCccEEEEEeeecCC---CCCC
Confidence            3568999999999999999999999999999999999999999999999999999999988999999999887   6789


Q ss_pred             ceeeEEecCCCCCCccEEEeeEEeCCCCCcceeEeccCCCCCCcEEEEEEEcCceEEEEecCEEEEEEecCCCCCCCCCC
Q 022405          108 DELDFEFLGNRTGQPYLIQTNIYKNGTGNREMRHMLWFDPTQDYHTYSILWNNHQIVFFVDRVPIRVFKNNGKANDFFPN  187 (297)
Q Consensus       108 dEIDiE~lGn~~g~p~~~qTNv~~~G~g~re~~~~l~fdp~~dfHtY~i~Wtp~~I~fyVDG~~vr~~~~~~~~g~~~P~  187 (297)
                      +|||||++|+..++|+++|||+|.+|.+++++++.+++||+++||+|+|+|+|++|+|||||++||++++.+..+.++|.
T Consensus        79 dEIDiE~lG~~~~~~~~v~tn~~~~g~g~~~~~~~~~~d~s~dFHtY~i~Wtp~~I~fyVDG~~vr~~~n~~~~g~~~p~  158 (267)
T d1umza_          79 DEIDFEFLGNRTGQPYILQTNVFTGGKGDREQRIYLWFDPTKEFHYYSVLWNMYMIVFLVDDVPIRVFKNCKDLGVKFPF  158 (267)
T ss_dssp             CEEEEEEECCSTTSCCEEEEEEEBTTBCCCCEEECCSSCTTTSCEEEEEEECSSEEEEEETTEEEEEEECCGGGTCCCSC
T ss_pred             CeEEEEEecccCCcccEEEeeEeCCCCCCcceeEecCCCCccCcEEEEEEECcceEEEEECCEEEEEEeccccCCCCCCc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999998888888987


Q ss_pred             CCceEEEEEeeeCCCcccCCCCcccCCCCCCeEEEEcEEEEEEeecCCCCCCCCCCCCcccccccCCCCCCHHHHHHHHH
Q 022405          188 EKPMYLFSSIWNADEWATRGGLEKTDWKKAPFVSSYKDFSVDGCQWEDPYPECVSTTTKNWWDQYDAWHLSDSQKLDHAW  267 (297)
Q Consensus       188 ~~Pm~l~lnlW~gg~Wat~GG~~~~d~~~~Pf~a~~~~~~v~~c~~~~~~~~C~~~~~~~~~~~~~~~~l~~~~~~~~~~  267 (297)
                      ++||+|++|||+||+|||+||+++|||+++||+|.|++|+|++|.+++....|. .+...||++..+++|+.+|+++|+|
T Consensus       159 ~~pm~i~~niW~g~~Wat~gG~~~~d~~~aPf~a~~~~~~v~~c~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~~~~~~  237 (267)
T d1umza_         159 NQPMKIYSSLWNADDWATRGGLEKTDWSKAPFIASYRSFHIDGCEASVEAKFCA-TQGARWWDQKEFQDLDAFQYRRLSW  237 (267)
T ss_dssp             SSCBEEEEEEEECTTTSSGGGTSCCCGGGCCEEEEEEEEEEEEEECCSSSCCCT-TTTCSGGGSGGGSSCCHHHHHHHHH
T ss_pred             ceEEEEEEeeeeCCCccccCCeeeecCCCCCEEEEEEEEEEEecccCCCCcccC-CCCCccccccccccCCHHHHHHHHH
Confidence            899999999999999999999999999999999999999999999877666665 3456799999999999999999999


Q ss_pred             HHhCCeeEecccCCCCCCCCCCCCCCCC
Q 022405          268 VLRNLVIYDYCKDTERFPTLPVECSLSP  295 (297)
Q Consensus       268 ~~~~~~~y~yc~d~~r~~~~~~ec~~~~  295 (297)
                      ||+||||||||+|++|||.+||||.+++
T Consensus       238 ~~~~~~~y~yC~d~~r~~~~p~EC~~~~  265 (267)
T d1umza_         238 VRQKYTIYNYCTDRSRYPSMPPECKRDR  265 (267)
T ss_dssp             HHHHTEEEEGGGCTTTCSSCCTHHHHHT
T ss_pred             HHHCCcEEccCCCCCcCCCCCcccCCCC
Confidence            9999999999999999999999998654
>d1ajka_ b.29.1.2 (A:) Bacillus 1-3,1-4-beta-glucanase {Bacillus macerans [TaxId: 44252]} Back     information, alignment and structure
>d2ayha_ b.29.1.2 (A:) Bacillus 1-3,1-4-beta-glucanase {synthetic, hybrid between Bacillus amyloliquefaciens and Bacillus macerans proteins} Back     information, alignment and structure
>d1mvea_ b.29.1.2 (A:) Bacillus 1-3,1-4-beta-glucanase {Fibrobacter succinogenes [TaxId: 833]} Back     information, alignment and structure
>d1dypa_ b.29.1.2 (A:) kappa-Carrageenase, catalytic {Pseudoalteromonas carrageenovora [TaxId: 227]} Back     information, alignment and structure
>d1o4ya_ b.29.1.2 (A:) beta-Agarase A {Zobellia galactanivorans [TaxId: 63186]} Back     information, alignment and structure
>d1upsa1 b.29.1.2 (A:19-284) GlcNAc-alpha-1,4-Gal-releasing endo-beta-galactosidase, GngC, catalytic domain {Clostridium perfringens [TaxId: 1502]} Back     information, alignment and structure
>d1o4za_ b.29.1.2 (A:) beta-Agarase A {Zobellia galactanivorans [TaxId: 63186]} Back     information, alignment and structure
>d1epwa1 b.29.1.6 (A:862-1079) Botulinum neurotoxin {Clostridium botulinum, serotype B [TaxId: 1491]} Back     information, alignment and structure
>d1a8da1 b.29.1.6 (A:1-247) Tetanus neurotoxin {Clostridium tetani [TaxId: 1513]} Back     information, alignment and structure
>d2erfa1 b.29.1.4 (A:10-215) Thrombospondin 1 N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1oq1a_ b.29.1.17 (A:) Hypothetical protein YesU {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d2slia1 b.29.1.9 (A:81-276) Leech intramolecular trans-sialidase, N-terminal domain {North american leech (Macrobdella decora) [TaxId: 6405]} Back     information, alignment and structure
>d1ajka_ b.29.1.2 (A:) Bacillus 1-3,1-4-beta-glucanase {Bacillus macerans [TaxId: 44252]} Back     information, alignment and structure
>d1saca_ b.29.1.5 (A:) Serum amyloid P component (SAP) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d3btaa1 b.29.1.6 (A:872-1078) Botulinum neurotoxin {Clostridium botulinum, serotype A [TaxId: 1491]} Back     information, alignment and structure
>d1w0pa1 b.29.1.8 (A:25-216) Vibrio cholerae sialidase, N-terminal and insertion domains {Vibrio cholerae [TaxId: 666]} Back     information, alignment and structure
>d1w0pa2 b.29.1.8 (A:347-543) Vibrio cholerae sialidase, N-terminal and insertion domains {Vibrio cholerae [TaxId: 666]} Back     information, alignment and structure
>d1b09a_ b.29.1.5 (A:) C-reactive protein (CRP) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure