Citrus Sinensis ID: 022493

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290------
MCSFFVLEQEFGCQADMMFCGIFDGHGPWGHFVAKKVRESMPSSLLCNWQETLAEASLLPDIDLDSDKKTHRFNIWKHSYVKTCAAVDQELEQHRQIDSFYSGTTALTIVRQGEFIMVANVGDSRAVLATTSEDGSLVPVQLTVDFKPNLPYEAERIIQCKGRVFCLEDEPGVHRVWLPNEECPGLAMSRAFGDYCVKDYGLISVPEVTQRHITSRDQFVVLATDGVWDVISNQEAIQIVSSTPNRAKSAKRLVECAVHAWKRKRKGIAMDDISAICLFFHSSPLSQQVHAVATPK
ccccEEEEccccccccEEEEEEEEccccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccEEEEEEEEccEEEEEEccccEEEEEEEcccccccEEEcccccccccHHHHHHHHHcccEEEEEcccccccEEEccccccccHHHHHHcccccccccccEEccEEEEEEccccccEEEEEccccccccccHHHHHHHHccccHHHHHHHHHHHHHHHHHHHccccccccEEEEEEEccccccccccccccccc
cccHEEEEHcccccccEEEEEEEccccccHHHHHHHHHHHHHHHHHHcHHHccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHcccccccccccEEEEEEEccccEEEEEcccccEEEEEccccccEEEEEEEcccccccHHHHHHHHHcccEEEEcccccccEEEEcccccccHHHHHHHHccHHHHHccEEEcccEEEEEEccccEEEEEEccccEEEccHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHccccccccEEEEEEEEcccccccccccccccc
MCSFFVLEqefgcqadmmfcgifdghgpwghFVAKKVresmpssllCNWQETLAEasllpdidldsdkkthrfniwkhSYVKTCAAVDQELEQHRqidsfysgttALTIVRQGEFIMVANVGDSRAVLattsedgslvpvqltvdfkpnlpyEAERIIQckgrvfcledepgvhrvwlpneecpglamsrafgdycvkdyglisvpevtqrhitsrdQFVVLATDGvwdvisnqEAIQIVSSTPNRAKSAKRLVECAVHAWKRkrkgiamdDISAIClffhssplsqqvhavatpk
MCSFFVLEQEFGCQADMMFCGIFDGHGPWGHFVAKKVRESMPSSLLCNWQETLAEASLLPDIDLDSDKKTHRFNIWKHSYVKTCAAVDQELEQHRQIDSFYSGTTALTIVRQGEFIMVANVGDSRAVLAttsedgslvpvqLTVDFKPNLPYEAERIIQCKGRVFCLEDEPGVHRVWLPNEECPGLAMSRAFGDYCVKDYGLISVPEVTQRHITSRDQFVVLATDGVWDVISNQeaiqivsstpnraksakRLVECAVHAWKRKRKGIAMDDISAICLFFhssplsqqvhavatpk
MCSFFVLEQEFGCQADMMFCGIFDGHGPWGHFVAKKVRESMPSSLLCNWQETLAEASLLPDIDLDSDKKTHRFNIWKHSYVKTCAAVDQELEQHRQIDSFYSGTTALTIVRQGEFIMVANVGDSRAVLATTSEDGSLVPVQLTVDFKPNLPYEAERIIQCKGRVFCLEDEPGVHRVWLPNEECPGLAMSRAFGDYCVKDYGLISVPEVTQRHITSRDQFVVLATDGVWDVISNQEAIQIVSSTPNRAKSAKRLVECAVHAWKRKRKGIAMDDISAICLFFHSSPLSQQVHAVATPK
**SFFVLEQEFGCQADMMFCGIFDGHGPWGHFVAKKVRESMPSSLLCNWQETLAEASLLPDIDLDSDKKTHRFNIWKHSYVKTCAAVDQELEQHRQIDSFYSGTTALTIVRQGEFIMVANVGDSRAVLATTSEDGSLVPVQLTVDFKPNLPYEAERIIQCKGRVFCLEDEPGVHRVWLPNEECPGLAMSRAFGDYCVKDYGLISVPEVTQRHITSRDQFVVLATDGVWDVISNQEAIQIVSS******SAKRLVECAVHAWKRKRKGIAMDDISAICLFFHS**************
MCSFFVLEQEFGCQADMMFCGIFDGHGPWGHFVAKKVRESMPSSLLCNWQETLAEAS****IDLDSDKKTHRFNIWKHSYVKTCAAVDQELEQHRQIDSFYSGTTALTIVRQGEFIMVANVGDSRAVLATTSEDGSLVPVQLTVDFKPNLPYEAERIIQCKGRVFCLEDEPGVHRVWLPNEECPGLAMSRAFGDYCVKDYGLISVPEVTQRHITSRDQFVVLATDGVWDVISNQEAIQIVSSTPNRAKSAKRLVECAVHAWKRKRKGIAMDDISAICLFF****************
MCSFFVLEQEFGCQADMMFCGIFDGHGPWGHFVAKKVRESMPSSLLCNWQETLAEASLLPDIDLDSDKKTHRFNIWKHSYVKTCAAVDQELEQHRQIDSFYSGTTALTIVRQGEFIMVANVGDSRAVLATTSEDGSLVPVQLTVDFKPNLPYEAERIIQCKGRVFCLEDEPGVHRVWLPNEECPGLAMSRAFGDYCVKDYGLISVPEVTQRHITSRDQFVVLATDGVWDVISNQEAIQIVS***********LVECAVHAWKRKRKGIAMDDISAICLFFHSSPLS**********
*CSFFVLEQEFGCQADMMFCGIFDGHGPWGHFVAKKVRESMPSSLLCNWQET****************KTHRFNIWKHSYVKTCAAVDQELEQHRQIDSFYSGTTALTIVRQGEFIMVANVGDSRAVLATTSEDGSLVPVQLTVDFKPNLPYEAERIIQCKGRVFCLEDEPGVHRVWLPNEECPGLAMSRAFGDYCVKDYGLISVPEVTQRHITSRDQFVVLATDGVWDVISNQEAIQIVSSTPNRAKSAKRLVECAVHAWKRKRKGIAMDDISAICLFFHS**************
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MCSFFVLEQEFGCQADMMFCGIFDGHGPWGHFVAKKVRESMPSSLLCNWQETLAEASLLPDIDLDSDKKTHRFNIWKHSYVKTCAAVDQELEQHRQIDSFYSGTTALTIVRQGEFIMVANVGDSRAVLATTSEDGSLVPVQLTVDFKPNLPYEAERIIQCKGRVFCLEDEPGVHRVWLPNEECPGLAMSRAFGDYCVKDYGLISVPEVTQRHITSRDQFVVLATDGVWDVISNQEAIQIVSSTPNRAKSAKRLVECAVHAWKRKRKGIAMDDISAICLFFHSSPLSQQVHAVATPK
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query296 2.2.26 [Sep-21-2011]
Q0WRB2373 Probable protein phosphat yes no 0.908 0.721 0.755 1e-126
Q9M9W9358 Probable protein phosphat no no 0.915 0.756 0.742 1e-123
Q6L482353 Probable protein phosphat yes no 0.915 0.767 0.625 1e-101
Q9LRZ4351 Probable protein phosphat no no 0.915 0.772 0.594 1e-94
Q8RXZ4504 Probable protein phosphat no no 0.942 0.553 0.455 2e-81
Q9FG61448 Probable protein phosphat no no 0.945 0.625 0.439 6e-78
Q9M8R7492 Probable protein phosphat no no 0.966 0.581 0.446 8e-78
Q9SA22491 Probable protein phosphat no no 0.966 0.582 0.450 5e-77
Q6ZKL8 531 Probable protein phosphat no no 0.898 0.500 0.496 4e-76
Q8H4S6427 Probable protein phosphat no no 0.861 0.597 0.487 1e-74
>sp|Q0WRB2|P2C73_ARATH Probable protein phosphatase 2C 73 OS=Arabidopsis thaliana GN=PPC6-7 PE=2 SV=1 Back     alignment and function desciption
 Score =  450 bits (1157), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 204/270 (75%), Positives = 240/270 (88%), Gaps = 1/270 (0%)

Query: 11  FGCQADMMFCGIFDGHGPWGHFVAKKVRESMPSSLLCNWQETLAEASLLPDIDLD-SDKK 69
           FGCQ DM+FCGIFDGHGPWGH+VAK+VR SMP SLLCNWQ+ LA+A+L P++DL+ S+KK
Sbjct: 84  FGCQEDMIFCGIFDGHGPWGHYVAKQVRNSMPLSLLCNWQKILAQATLEPELDLEGSNKK 143

Query: 70  THRFNIWKHSYVKTCAAVDQELEQHRQIDSFYSGTTALTIVRQGEFIMVANVGDSRAVLA 129
             RF+IWK SY+KTCA VDQELE HR+IDS+YSGTTALTIVRQGE I VANVGDSRAVLA
Sbjct: 144 ISRFDIWKQSYLKTCATVDQELEHHRKIDSYYSGTTALTIVRQGEVIYVANVGDSRAVLA 203

Query: 130 TTSEDGSLVPVQLTVDFKPNLPYEAERIIQCKGRVFCLEDEPGVHRVWLPNEECPGLAMS 189
             S++GSLV VQLT+DFKPNLP E ERII CKGRVFCL+DEPGVHRVW P+ E PGLAMS
Sbjct: 204 MESDEGSLVAVQLTLDFKPNLPQEKERIIGCKGRVFCLDDEPGVHRVWQPDAETPGLAMS 263

Query: 190 RAFGDYCVKDYGLISVPEVTQRHITSRDQFVVLATDGVWDVISNQEAIQIVSSTPNRAKS 249
           RAFGDYC+K+YGL+SVPEVTQRHI+++D F++LA+DG+WDVISNQEAI+IVSST  R K+
Sbjct: 264 RAFGDYCIKEYGLVSVPEVTQRHISTKDHFIILASDGIWDVISNQEAIEIVSSTAERPKA 323

Query: 250 AKRLVECAVHAWKRKRKGIAMDDISAICLF 279
           AKRLVE AV AWK+KR+G +MDD+S +CLF
Sbjct: 324 AKRLVEQAVRAWKKKRRGYSMDDMSVVCLF 353

Arabidopsis thaliana (taxid: 3702)
EC: 3EC: .EC: 1EC: .EC: 3EC: .EC: 1EC: 6
>sp|Q9M9W9|P2C34_ARATH Probable protein phosphatase 2C 34 OS=Arabidopsis thaliana GN=At3g05640 PE=2 SV=1 Back     alignment and function description
>sp|Q6L482|P2C48_ORYSJ Probable protein phosphatase 2C 48 OS=Oryza sativa subsp. japonica GN=Os05g0358500 PE=2 SV=1 Back     alignment and function description
>sp|Q9LRZ4|P2C41_ARATH Probable protein phosphatase 2C 41 OS=Arabidopsis thaliana GN=At3g16800 PE=2 SV=1 Back     alignment and function description
>sp|Q8RXZ4|P2C18_ARATH Probable protein phosphatase 2C 18 OS=Arabidopsis thaliana GN=At1g79630 PE=2 SV=1 Back     alignment and function description
>sp|Q9FG61|P2C74_ARATH Probable protein phosphatase 2C 74 OS=Arabidopsis thaliana GN=At5g36250 PE=2 SV=1 Back     alignment and function description
>sp|Q9M8R7|P2C33_ARATH Probable protein phosphatase 2C 33 OS=Arabidopsis thaliana GN=PPC6-1 PE=1 SV=1 Back     alignment and function description
>sp|Q9SA22|P2C06_ARATH Probable protein phosphatase 2C 6 OS=Arabidopsis thaliana GN=At1g16220 PE=2 SV=1 Back     alignment and function description
>sp|Q6ZKL8|P2C66_ORYSJ Probable protein phosphatase 2C 66 OS=Oryza sativa subsp. japonica GN=Os08g0500300 PE=2 SV=1 Back     alignment and function description
>sp|Q8H4S6|P2C64_ORYSJ Probable protein phosphatase 2C 64 OS=Oryza sativa subsp. japonica GN=Os07g0566200 PE=2 SV=2 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query296
224123886368 predicted protein [Populus trichocarpa] 0.983 0.790 0.852 1e-148
224123012368 predicted protein [Populus trichocarpa] 0.983 0.790 0.848 1e-147
225450755366 PREDICTED: probable protein phosphatase 0.972 0.786 0.821 1e-142
356572950369 PREDICTED: probable protein phosphatase 0.983 0.788 0.804 1e-140
255542816359 protein phosphatase 2c, putative [Ricinu 0.956 0.788 0.826 1e-139
363807333368 uncharacterized protein LOC100794039 [Gl 0.959 0.771 0.800 1e-138
356576817367 PREDICTED: probable protein phosphatase 0.972 0.784 0.781 1e-136
356505797371 PREDICTED: probable protein phosphatase 0.972 0.776 0.814 1e-135
449454051367 PREDICTED: probable protein phosphatase 0.966 0.779 0.772 1e-135
357441815352 hypothetical protein MTR_1g083690 [Medic 0.935 0.786 0.787 1e-133
>gi|224123886|ref|XP_002330233.1| predicted protein [Populus trichocarpa] gi|118481990|gb|ABK92926.1| unknown [Populus trichocarpa] gi|222871689|gb|EEF08820.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
 Score =  529 bits (1362), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 248/291 (85%), Positives = 270/291 (92%)

Query: 6   VLEQEFGCQADMMFCGIFDGHGPWGHFVAKKVRESMPSSLLCNWQETLAEASLLPDIDLD 65
           ++ + FGCQADMMFCGIFDGHG WGHFVAK VRESMP SLLCNWQETLA+ SL PDIDL+
Sbjct: 78  IVWEGFGCQADMMFCGIFDGHGSWGHFVAKTVRESMPLSLLCNWQETLAQCSLDPDIDLE 137

Query: 66  SDKKTHRFNIWKHSYVKTCAAVDQELEQHRQIDSFYSGTTALTIVRQGEFIMVANVGDSR 125
           SDKK  RFNIWKHSY+KTCAAVDQELEQHR+IDSF SGTTALTIVRQGE I VANVGDSR
Sbjct: 138 SDKKHQRFNIWKHSYLKTCAAVDQELEQHRRIDSFSSGTTALTIVRQGELIFVANVGDSR 197

Query: 126 AVLATTSEDGSLVPVQLTVDFKPNLPYEAERIIQCKGRVFCLEDEPGVHRVWLPNEECPG 185
           AVLATT EDGSLVPVQLTVDFKPNLP EAERI+QCKGRVFCL DEPGVHRVWLP+ + PG
Sbjct: 198 AVLATTGEDGSLVPVQLTVDFKPNLPQEAERILQCKGRVFCLNDEPGVHRVWLPDADSPG 257

Query: 186 LAMSRAFGDYCVKDYGLISVPEVTQRHITSRDQFVVLATDGVWDVISNQEAIQIVSSTPN 245
           LAMSRAFGDYCVKD+G+ISVPEVTQRHITS+DQFVVLATDGVWDVI+NQ A++IVSSTP+
Sbjct: 258 LAMSRAFGDYCVKDFGVISVPEVTQRHITSKDQFVVLATDGVWDVITNQAAVEIVSSTPD 317

Query: 246 RAKSAKRLVECAVHAWKRKRKGIAMDDISAICLFFHSSPLSQQVHAVATPK 296
           +AK+AKRLV+ AVHAWKRKRKGIAMDDISAICLFFHSSP SQQVHA ++PK
Sbjct: 318 KAKAAKRLVQSAVHAWKRKRKGIAMDDISAICLFFHSSPSSQQVHAASSPK 368

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|224123012|ref|XP_002318972.1| predicted protein [Populus trichocarpa] gi|222857348|gb|EEE94895.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|225450755|ref|XP_002283583.1| PREDICTED: probable protein phosphatase 2C 73 [Vitis vinifera] gi|296089709|emb|CBI39528.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|356572950|ref|XP_003554628.1| PREDICTED: probable protein phosphatase 2C 73-like [Glycine max] Back     alignment and taxonomy information
>gi|255542816|ref|XP_002512471.1| protein phosphatase 2c, putative [Ricinus communis] gi|223548432|gb|EEF49923.1| protein phosphatase 2c, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|363807333|ref|NP_001242626.1| uncharacterized protein LOC100794039 [Glycine max] gi|255647130|gb|ACU24033.1| unknown [Glycine max] Back     alignment and taxonomy information
>gi|356576817|ref|XP_003556526.1| PREDICTED: probable protein phosphatase 2C 73-like [Glycine max] Back     alignment and taxonomy information
>gi|356505797|ref|XP_003521676.1| PREDICTED: probable protein phosphatase 2C 73-like [Glycine max] Back     alignment and taxonomy information
>gi|449454051|ref|XP_004144769.1| PREDICTED: probable protein phosphatase 2C 73-like [Cucumis sativus] gi|449490868|ref|XP_004158730.1| PREDICTED: probable protein phosphatase 2C 73-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|357441815|ref|XP_003591185.1| hypothetical protein MTR_1g083690 [Medicago truncatula] gi|87162555|gb|ABD28350.1| Protein phosphatase 2C-like [Medicago truncatula] gi|355480233|gb|AES61436.1| hypothetical protein MTR_1g083690 [Medicago truncatula] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query296
TAIR|locus:2143325373 AT5G27930 [Arabidopsis thalian 0.966 0.766 0.734 1.3e-116
TAIR|locus:2078117358 AT3G05640 [Arabidopsis thalian 0.932 0.770 0.740 1.9e-113
TAIR|locus:2086755351 AT3G16800 [Arabidopsis thalian 0.915 0.772 0.594 1.6e-88
TAIR|locus:2019868504 AT1G79630 [Arabidopsis thalian 0.766 0.450 0.528 2.2e-78
TAIR|locus:2183612448 PP2C74 "AT5G36250" [Arabidopsi 0.695 0.459 0.529 5.9e-74
TAIR|locus:2032880491 AT1G16220 [Arabidopsis thalian 0.736 0.443 0.532 1.6e-73
TAIR|locus:2020863462 AT1G03590 [Arabidopsis thalian 0.891 0.571 0.490 1.4e-71
TAIR|locus:504955459468 PP2C52 "AT4G03415" [Arabidopsi 0.888 0.561 0.476 3.8e-69
TAIR|locus:2149775382 AT5G01700 [Arabidopsis thalian 0.935 0.725 0.434 2e-63
TAIR|locus:2180612331 AT5G26010 [Arabidopsis thalian 0.895 0.800 0.460 6.2e-62
TAIR|locus:2143325 AT5G27930 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1149 (409.5 bits), Expect = 1.3e-116, P = 1.3e-116
 Identities = 213/290 (73%), Positives = 250/290 (86%)

Query:    11 FGCQADMMFCGIFDGHGPWGHFVAKKVRESMPSSLLCNWQETLAEASLLPDIDLD-SDKK 69
             FGCQ DM+FCGIFDGHGPWGH+VAK+VR SMP SLLCNWQ+ LA+A+L P++DL+ S+KK
Sbjct:    84 FGCQEDMIFCGIFDGHGPWGHYVAKQVRNSMPLSLLCNWQKILAQATLEPELDLEGSNKK 143

Query:    70 THRFNIWKHSYVKTCAAVDQELEQHRQIDSFYSGTTALTIVRQGEFIMVANVGDSRAVLA 129
               RF+IWK SY+KTCA VDQELE HR+IDS+YSGTTALTIVRQGE I VANVGDSRAVLA
Sbjct:   144 ISRFDIWKQSYLKTCATVDQELEHHRKIDSYYSGTTALTIVRQGEVIYVANVGDSRAVLA 203

Query:   130 TTSEDGSLVPVQLTVDFKPNLPYEAERIIQCKGRVFCLEDEPGVHRVWLPNEECPGLAMS 189
               S++GSLV VQLT+DFKPNLP E ERII CKGRVFCL+DEPGVHRVW P+ E PGLAMS
Sbjct:   204 MESDEGSLVAVQLTLDFKPNLPQEKERIIGCKGRVFCLDDEPGVHRVWQPDAETPGLAMS 263

Query:   190 RAFGDYCVKDYGLISVPEVTQRHITSRDQFVVLATDGVWDVISNQEAIQIVSSTPNRAKS 249
             RAFGDYC+K+YGL+SVPEVTQRHI+++D F++LA+DG+WDVISNQEAI+IVSST  R K+
Sbjct:   264 RAFGDYCIKEYGLVSVPEVTQRHISTKDHFIILASDGIWDVISNQEAIEIVSSTAERPKA 323

Query:   250 AKRLVECAVHAWKRKRKGIAMDDISAICLFFHSSP---LSQQVHAVATPK 296
             AKRLVE AV AWK+KR+G +MDD+S +CLF HSS    LSQ  HA+   K
Sbjct:   324 AKRLVEQAVRAWKKKRRGYSMDDMSVVCLFLHSSSSSSLSQHHHAMTILK 373
GO:0003824 "catalytic activity" evidence=IEA
GO:0004722 "protein serine/threonine phosphatase activity" evidence=ISS
GO:0005737 "cytoplasm" evidence=ISM
TAIR|locus:2078117 AT3G05640 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2086755 AT3G16800 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2019868 AT1G79630 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2183612 PP2C74 "AT5G36250" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2032880 AT1G16220 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2020863 AT1G03590 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:504955459 PP2C52 "AT4G03415" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2149775 AT5G01700 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2180612 AT5G26010 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q0WRB2P2C73_ARATH3, ., 1, ., 3, ., 1, 60.75550.90870.7211yesno
Q6L482P2C48_ORYSJ3, ., 1, ., 3, ., 1, 60.62540.91550.7677yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer3.1.3.16LOW CONFIDENCE prediction!
3rd Layer3.1.3LOW CONFIDENCE prediction!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query296
cd00143254 cd00143, PP2Cc, Serine/threonine phosphatases, fam 3e-64
smart00332252 smart00332, PP2Cc, Serine/threonine phosphatases, 9e-50
pfam00481252 pfam00481, PP2C, Protein phosphatase 2C 6e-39
COG0631262 COG0631, PTC1, Serine/threonine protein phosphatas 8e-27
PTZ00224381 PTZ00224, PTZ00224, protein phosphatase 2C; Provis 4e-18
PLN03145365 PLN03145, PLN03145, Protein phosphatase 2c; Provis 1e-15
>gnl|CDD|238083 cd00143, PP2Cc, Serine/threonine phosphatases, family 2C, catalytic domain; The protein architecture and deduced catalytic mechanism of PP2C phosphatases are similar to the PP1, PP2A, PP2B family of protein Ser/Thr phosphatases, with which PP2C shares no sequence similarity Back     alignment and domain information 
 Score =  202 bits (515), Expect = 3e-64
 Identities = 88/285 (30%), Positives = 130/285 (45%), Gaps = 50/285 (17%)

Query: 1   MCSFFVLEQEFGCQADMMFCGIFDGHGPWGHFVAKKVRESMPSSLLCNWQETLAEASLLP 60
                V++     + D    G+FDGHG  GH   +   + +   LL   +ETL  +    
Sbjct: 15  NEDAVVIKPNLNNE-DGGLFGVFDGHG--GHAAGEFASKLLVEELLEELEETLTLSEEDI 71

Query: 61  DIDLDSDKKTHRFNIWKHSYVKTCAAVDQELEQHRQ--IDSFYSGTTALTIVRQGEFIMV 118
           +  L                 K     D+E+ +  Q   D   SGTTA+  + +G  + V
Sbjct: 72  EEAL----------------RKAFLRADEEILEEAQDEPDDARSGTTAVVALIRGNKLYV 115

Query: 119 ANVGDSRAVLATTSEDGSLVPVQLTVDFKPNLPYEAERIIQCKGRVFCLEDEPGVHRVWL 178
           ANVGDSRAVL    E      VQLT D KP    E ERI +  GRV              
Sbjct: 116 ANVGDSRAVLCRNGE-----AVQLTKDHKPVNEEERERIEKAGGRVS------------- 157

Query: 179 PNEECPGLAMSRAFGDYCVKDYGLISVPEVTQRHITSRDQFVVLATDGVWDVISNQEAIQ 238
                  LA++RA GD+ +K  G+ + P+VT   +T  D F++LA+DG+WDV+SNQEA+ 
Sbjct: 158 NGRVPGVLAVTRALGDFDLK-PGVSAEPDVTVVKLTEDDDFLILASDGLWDVLSNQEAVD 216

Query: 239 IVSSTPNR---AKSAKRLVECAVHAWKRKRKGIAMDDISAICLFF 280
           IV S   +    ++A+ LV+ A+            D+I+ + +  
Sbjct: 217 IVRSELAKEDLQEAAQELVDLALRRGSH-------DNITVVVVRL 254

Length = 254
>gnl|CDD|214625 smart00332, PP2Cc, Serine/threonine phosphatases, family 2C, catalytic domain Back     alignment and domain information
>gnl|CDD|215938 pfam00481, PP2C, Protein phosphatase 2C Back     alignment and domain information
>gnl|CDD|223704 COG0631, PTC1, Serine/threonine protein phosphatase [Signal transduction mechanisms] Back     alignment and domain information
>gnl|CDD|240318 PTZ00224, PTZ00224, protein phosphatase 2C; Provisional Back     alignment and domain information
>gnl|CDD|215603 PLN03145, PLN03145, Protein phosphatase 2c; Provisional Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 296
PLN03145365 Protein phosphatase 2c; Provisional 100.0
KOG0698330 consensus Serine/threonine protein phosphatase [Si 100.0
PF00481254 PP2C: Protein phosphatase 2C; InterPro: IPR001932 100.0
KOG0697379 consensus Protein phosphatase 1B (formerly 2C) [Si 100.0
PTZ00224381 protein phosphatase 2C; Provisional 100.0
COG0631262 PTC1 Serine/threonine protein phosphatase [Signal 100.0
KOG0700390 consensus Protein phosphatase 2C/pyruvate dehydrog 100.0
KOG0699542 consensus Serine/threonine protein phosphatase [Si 100.0
PRK14559645 putative protein serine/threonine phosphatase; Pro 100.0
cd00143254 PP2Cc Serine/threonine phosphatases, family 2C, ca 100.0
smart00332255 PP2Cc Serine/threonine phosphatases, family 2C, ca 100.0
KOG1323493 consensus Serine/threonine phosphatase [Signal tra 99.97
KOG0618 1081 consensus Serine/threonine phosphatase 2C containi 99.86
KOG1379330 consensus Serine/threonine protein phosphatase [Si 99.85
PF13672212 PP2C_2: Protein phosphatase 2C; PDB: 2JFT_A 2JFS_A 99.74
smart00331193 PP2C_SIG Sigma factor PP2C-like phosphatases. 99.73
TIGR02865764 spore_II_E stage II sporulation protein E. Stage I 99.54
PF07228193 SpoIIE: Stage II sporulation protein E (SpoIIE); I 99.49
COG2208367 RsbU Serine phosphatase RsbU, regulator of sigma s 98.48
>PLN03145 Protein phosphatase 2c; Provisional Back     alignment and domain information 
Probab=100.00  E-value=4.9e-47  Score=343.35  Aligned_cols=227  Identities=28%  Similarity=0.464  Sum_probs=186.7

Q ss_pred             CeEEEEEeeCCCcCcHHHHHHHHHHhHHHHHHHHHHHHHhhcCCCCCCCcchhhhhhHHHHHHHHHHHHHHHHHHHHhcc
Q 022493           16 DMMFCGIFDGHGPWGHFVAKKVRESMPSSLLCNWQETLAEASLLPDIDLDSDKKTHRFNIWKHSYVKTCAAVDQELEQHR   95 (296)
Q Consensus        16 ~~~l~~V~DG~Gg~G~~~s~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~   95 (296)
                      ...|||||||||  |+.+++++++.+++.+.....           +          .+.+++++.+++..+++.+.+..
T Consensus       102 ~~~lf~V~DGhG--G~~age~as~~l~~~i~~~~~-----------~----------~~~~~~al~~af~~~d~~~~~~~  158 (365)
T PLN03145        102 PSAFYGVFDGHG--GKHAADFACYHLPRFIVEDED-----------F----------PREIEKVVSSAFLQTDTAFAEAC  158 (365)
T ss_pred             CceEEEEEeCCC--CHHHHHHHHHHHHHHHHhhhc-----------c----------chhHHHHHHHHHHHHhHHHHhhh
Confidence            468999999999  999999999999998874210           0          01455667777777777775532


Q ss_pred             C-CCCcCCcceEEEEEEECCeEEEEEeccCceEEEEecCCCceeEEEcCccCCCCChhhHHHHHHcCCeeEeecCCCCce
Q 022493           96 Q-IDSFYSGTTALTIVRQGEFIMVANVGDSRAVLATTSEDGSLVPVQLTVDFKPNLPYEAERIIQCKGRVFCLEDEPGVH  174 (296)
Q Consensus        96 ~-~~~~~~GtT~~~~~i~~~~l~~anvGDSr~~l~~~~~~g~~~~~~lt~dH~~~~~~E~~ri~~~gg~i~~~~~~~~~~  174 (296)
                      . .....+|||++++++.++++|+|||||||+|+++   +|  ++++||.||+|.++.|++||.+.||.+..       .
T Consensus       159 ~~~~~~~~GTTavv~li~~~~l~vaNvGDSRayl~r---~g--~~~~LT~DH~~~~~~E~~RI~~~Gg~v~~-------g  226 (365)
T PLN03145        159 SLDASLASGTTALAALVVGRSLVVANAGDCRAVLCR---RG--KAIEMSRDHKPMCSKERKRIEASGGYVYD-------G  226 (365)
T ss_pred             ccccCCCCcCcEEEEEEECCeEEEEecCCceEEEEc---CC--eEEEecCCCCCCCHHHHHHHHHcCCceec-------c
Confidence            2 2234599999999999999999999999999997   45  56999999999999999999999998863       1


Q ss_pred             eEecCCCCCCCcccccccCccccccc------CccccceeEEEEecCCCeEEEEecCCCCCCCCHHHHHHHHh----cCC
Q 022493          175 RVWLPNEECPGLAMSRAFGDYCVKDY------GLISVPEVTQRHITSRDQFVVLATDGVWDVISNQEAIQIVS----STP  244 (296)
Q Consensus       175 rv~~~~~~~~~l~~tRalGd~~~k~~------~v~~~Pdi~~~~l~~~d~fliL~SDGl~d~l~~~ei~~i~~----~~~  244 (296)
                      |+      .+.+.+||||||..+|..      +++++|++..+++.++|.|||||||||||+|+++++++++.    +..
T Consensus       227 ~v------~g~l~vTRalGD~~~k~~k~~~~~~vs~ePdv~~~~l~~~D~fLILaSDGLwdvls~ee~v~~i~~~l~~~~  300 (365)
T PLN03145        227 YL------NGQLNVARALGDWHMEGMKGSDGGPLSAEPELMTTQLTEEDEFLIIGCDGIWDVFRSQNAVDFARRRLQEHN  300 (365)
T ss_pred             eE------CCccccccccccccccccccccCCCcceEEEEEEEECCCCCEEEEEeCCccccCcCHHHHHHHHHHHHhcCC
Confidence            22      566789999999988753      37899999999999999999999999999999999876664    346


Q ss_pred             ChHHHHHHHHHHHHHHHHhhcCCCCCCceEEEEEEccCCCCCcccC
Q 022493          245 NRAKSAKRLVECAVHAWKRKRKGIAMDDISAICLFFHSSPLSQQVH  290 (296)
Q Consensus       245 ~~~~~a~~L~~~a~~~~~~~~~g~~~DNiTvivv~~~~~~~~~~~~  290 (296)
                      +++++|+.|++.|+.      +| +.||||||||+|+..+.+..+.
T Consensus       301 ~p~~aa~~Lv~~Al~------rg-s~DNITvIVV~l~~~~~~~~~~  339 (365)
T PLN03145        301 DPVMCSKELVDEALK------RK-SGDNLAVVVVCFQSQPPPNLVA  339 (365)
T ss_pred             CHHHHHHHHHHHHHh------CC-CCCCEEEEEEEeecCCCccccc
Confidence            799999999999998      57 9999999999999865554443

>KOG0698 consensus Serine/threonine protein phosphatase [Signal transduction mechanisms] Back     alignment and domain information
>PF00481 PP2C: Protein phosphatase 2C; InterPro: IPR001932 This domain is found in protein phosphatase 2C, as well as other proteins eg Back     alignment and domain information
>KOG0697 consensus Protein phosphatase 1B (formerly 2C) [Signal transduction mechanisms] Back     alignment and domain information
>PTZ00224 protein phosphatase 2C; Provisional Back     alignment and domain information
>COG0631 PTC1 Serine/threonine protein phosphatase [Signal transduction mechanisms] Back     alignment and domain information
>KOG0700 consensus Protein phosphatase 2C/pyruvate dehydrogenase (lipoamide) phosphatase [Signal transduction mechanisms] Back     alignment and domain information
>KOG0699 consensus Serine/threonine protein phosphatase [Signal transduction mechanisms] Back     alignment and domain information
>PRK14559 putative protein serine/threonine phosphatase; Provisional Back     alignment and domain information
>cd00143 PP2Cc Serine/threonine phosphatases, family 2C, catalytic domain; The protein architecture and deduced catalytic mechanism of PP2C phosphatases are similar to the PP1, PP2A, PP2B family of protein Ser/Thr phosphatases, with which PP2C shares no sequence similarity Back     alignment and domain information
>smart00332 PP2Cc Serine/threonine phosphatases, family 2C, catalytic domain Back     alignment and domain information
>KOG1323 consensus Serine/threonine phosphatase [Signal transduction mechanisms] Back     alignment and domain information
>KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms] Back     alignment and domain information
>KOG1379 consensus Serine/threonine protein phosphatase [Signal transduction mechanisms] Back     alignment and domain information
>PF13672 PP2C_2: Protein phosphatase 2C; PDB: 2JFT_A 2JFS_A 2V06_A 2JFR_A 2J86_A 2J82_A 2Y09_A 2XZV_A 2CM1_A 1TXO_B Back     alignment and domain information
>smart00331 PP2C_SIG Sigma factor PP2C-like phosphatases Back     alignment and domain information
>TIGR02865 spore_II_E stage II sporulation protein E Back     alignment and domain information
>PF07228 SpoIIE: Stage II sporulation protein E (SpoIIE); InterPro: IPR001932 This domain is found in protein phosphatase 2C, as well as other proteins eg Back     alignment and domain information
>COG2208 RsbU Serine phosphatase RsbU, regulator of sigma subunit [Signal transduction mechanisms / Transcription] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query296
2i44_A324 Crystal Structure Of Serine-Threonine Phosphatase 2 1e-19
3kdj_B316 Complex Structure Of (+)-Aba-Bound Pyl1 And Abi1 Le 6e-19
3nmn_B319 Crystal Structure Of Pyrabactin-Bound Abscisic Acid 1e-18
3jrq_A326 Crystal Structure Of (+)-aba-bound Pyl1 In Complex 1e-18
3nmv_B324 Crystal Structure Of Pyrabactin-Bound Abscisic Acid 2e-17
3kb3_B321 Crystal Structure Of Abscisic Acid-Bound Pyl2 In Co 8e-16
3qn1_B337 Crystal Structure Of The Pyr1 Abscisic Acid Recepto 8e-16
4ds8_B343 Complex Structure Of Abscisic Acid Receptor Pyl3-(+ 8e-16
3ujg_B350 Crystal Structure Of Snrk2.6 In Complex With Hab1 L 8e-16
3nmt_B341 Crystal Structure Of Pyrabactin Bound Abscisic Acid 9e-16
3rt0_A340 Crystal Structure Of Pyl10-Hab1 Complex In The Abse 9e-16
2iq1_A274 Crystal Structure Of Human Ppm1k Length = 274 4e-14
4da1_A389 Crystal Structure Of Branched-Chain Alpha-Ketoacid 8e-14
2i0o_A304 Crystal Structure Of Anopheles Gambiae SerTHR PHOSP 1e-13
2p8e_A307 Crystal Structure Of The SerineTHREONINE PHOSPHATAS 9e-13
3mq3_A467 Crystal Structure Of Native Bovine Pdp1c Length = 4 8e-12
3fxj_A390 Crystal Structure Of Human Protein Phosphatase 1a ( 3e-11
1a6q_A382 Crystal Structure Of The Protein SerineTHREONINE PH 3e-11
2pnq_A467 Crystal Structure Of Pyruvate Dehydrogenase Phospha 4e-10
2isn_A364 Crystal Structure Of A Phosphatase From A Pathogeni 5e-07
>pdb|2I44|A Chain A, Crystal Structure Of Serine-Threonine Phosphatase 2c From Toxoplasma Gondii Length = 324 Back     alignment and structure 
Iteration: 1

 Score = 93.2 bits (230), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 81/281 (28%), Positives = 137/281 (48%), Gaps = 22/281 (7%)
Query: 16  DMMFCGIFDGHGPWGHFVAKKVRESMPSSLLCN--WQE-TLAEASLLPDIDLDSDKKTHR 72
           D  F G+FDG    G F ++ V++ +   L+ +  WQE T    S +P  ++D       
Sbjct: 52  DCAFFGVFDGT--VGDFASENVKDLVVPQLISSPAWQEVTEXLRSDVPATEVDEKLP--- 106
Query: 73  FNIWKHSYVKTCAAVDQELEQH-RQIDSFYSGTTALTIVRQGEFIMVANVGDSRAVLATT 131
             +   +        D EL +   Q++  Y+ +T++T V    F+ V ++GDSR      
Sbjct: 107 -QLLDQAVDDXYKNADNELVKXCEQLNKDYASSTSVTAVLAKGFVAVGHLGDSRIAXGVE 165
Query: 132 SEDGSLVPVQLTVDFKPNLPYEAERIIQCKGRVFCL---EDEPGVHRVWLP-----NEEC 183
           + +G L    LTVD KP+ P+E  RI +  G V  L    ++P +            E+ 
Sbjct: 166 TPNG-LNCEFLTVDHKPDXPHEKLRIXRNGGSVEYLHNHNNKPFIRGGDFSFRKSRGEQP 224
Query: 184 PGLAMSRAFGDYCVKDYGLISVPEVTQRHITSRDQFVVLATDGVWDVISNQEAIQIVSST 243
             L  SRAFG   +K YGL + P+V    +T + +  +LATDG+WDV S  +A++I    
Sbjct: 225 XQLQYSRAFGGKDLKXYGLSNQPDVRVVRVTPQHRVXILATDGLWDVXSAAQAVEIAXQA 284
Query: 244 PNRAKS-AKRLVECAVHAWKRKRKGIAMDDISAICLFFHSS 283
               ++ A+ LVE  +   +++ +  + D+I+A  +FF  +
Sbjct: 285 RQEGRNPAQALVEXTL--AEQQSRNQSADNITAXTVFFKKT 323
>pdb|3KDJ|B Chain B, Complex Structure Of (+)-Aba-Bound Pyl1 And Abi1 Length = 316 Back     alignment and structure
>pdb|3NMN|B Chain B, Crystal Structure Of Pyrabactin-Bound Abscisic Acid Receptor Pyl1 In Complex With Type 2c Protein Phosphatase Abi1 Length = 319 Back     alignment and structure
>pdb|3JRQ|A Chain A, Crystal Structure Of (+)-aba-bound Pyl1 In Complex With Abi1 Length = 326 Back     alignment and structure
>pdb|3NMV|B Chain B, Crystal Structure Of Pyrabactin-Bound Abscisic Acid Receptor Pyl2 Mutant A93f In Complex With Type 2c Protein Phosphatase Abi2 Length = 324 Back     alignment and structure
>pdb|3KB3|B Chain B, Crystal Structure Of Abscisic Acid-Bound Pyl2 In Complex With Hab1 Length = 321 Back     alignment and structure
>pdb|3QN1|B Chain B, Crystal Structure Of The Pyr1 Abscisic Acid Receptor In Complex With The Hab1 Type 2c Phosphatase Catalytic Domain Length = 337 Back     alignment and structure
>pdb|4DS8|B Chain B, Complex Structure Of Abscisic Acid Receptor Pyl3-(+)-Aba-Hab1 In The Presence Of Mn2+ Length = 343 Back     alignment and structure
>pdb|3UJG|B Chain B, Crystal Structure Of Snrk2.6 In Complex With Hab1 Length = 350 Back     alignment and structure
>pdb|3NMT|B Chain B, Crystal Structure Of Pyrabactin Bound Abscisic Acid Receptor Pyl2 Mutant A93f In Complex With Type 2c Protein Phosphatase Hab1 Length = 341 Back     alignment and structure
>pdb|3RT0|A Chain A, Crystal Structure Of Pyl10-Hab1 Complex In The Absence Of Abscisic Acid (Aba) Length = 340 Back     alignment and structure
>pdb|2IQ1|A Chain A, Crystal Structure Of Human Ppm1k Length = 274 Back     alignment and structure
>pdb|4DA1|A Chain A, Crystal Structure Of Branched-Chain Alpha-Ketoacid Dehydrogenase Phosphatase With Mg (Ii) Ions At The Active Site Length = 389 Back     alignment and structure
>pdb|2I0O|A Chain A, Crystal Structure Of Anopheles Gambiae SerTHR PHOSPHATASE COMPLEXED With Zn2+ Length = 304 Back     alignment and structure
>pdb|2P8E|A Chain A, Crystal Structure Of The SerineTHREONINE PHOSPHATASE Domain Of Human Ppm1b Length = 307 Back     alignment and structure
>pdb|3MQ3|A Chain A, Crystal Structure Of Native Bovine Pdp1c Length = 467 Back     alignment and structure
>pdb|3FXJ|A Chain A, Crystal Structure Of Human Protein Phosphatase 1a (Ppm1a) Bound With Phosphate At 3 Mm Of Mn2+ Length = 390 Back     alignment and structure
>pdb|1A6Q|A Chain A, Crystal Structure Of The Protein SerineTHREONINE PHOSPHATASE 2C AT 2 A Resolution Length = 382 Back     alignment and structure
>pdb|2PNQ|A Chain A, Crystal Structure Of Pyruvate Dehydrogenase Phosphatase 1 (Pdp1) Length = 467 Back     alignment and structure
>pdb|2ISN|A Chain A, Crystal Structure Of A Phosphatase From A Pathogenic Strain Toxoplasma Gondii Length = 364 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query296
2i44_A324 Serine-threonine phosphatase 2C; PSI-2, 8817Z, str 3e-98
4da1_A389 Protein phosphatase 1K, mitochondrial; metal-ION-a 4e-60
2iq1_A274 Protein phosphatase 2C kappa, PPM1K; structural ge 1e-59
3kdj_B316 Protein phosphatase 2C 56; ABA, PYL1, abscisic aci 8e-56
2irm_A358 Mitogen-activated protein kinase kinase kinase 7 i 2e-54
2p8e_A307 PPM1B beta isoform variant 6; structural genomics, 2e-53
1a6q_A382 Phosphatase 2C; catalytic mechanism, metalloenzyme 2e-51
2i0o_A304 Ser/Thr phosphatase; beta sandwich, structural gen 5e-51
2j4o_A401 Mitogen-activated protein kinase kinase kinase 7-i 9e-51
3qn1_B337 Protein phosphatase 2C 16; start domain, BET V dom 4e-50
2pnq_A467 [pyruvate dehydrogenase [lipoamide]]-phosphatase 1 3e-49
3d8k_A377 PP2C, protein phosphatase 2C; nysgrc, PSI-II, STR 6e-44
2isn_A364 NYSGXRC-8828Z, phosphatase; pathogenic strain, pra 9e-38
2pk0_A250 Serine/threonine protein phosphatase STP1; SI moti 8e-06
2j82_A240 TPPHA, protein serine-threonine phosphatase; PP2C 1e-04
3rnr_A211 Stage II sporulation E family protein; structural 3e-04
1txo_A237 Putative bacterial enzyme; serine/threonine protei 5e-04
2jfr_A234 Ser-Thr phosphatase MSPP; hydrolase, PPM phosphata 8e-04
>2i44_A Serine-threonine phosphatase 2C; PSI-2, 8817Z, structural genomics, protein structure initiative; 2.04A {Toxoplasma gondii} Length = 324 Back     alignment and structure
 Score =  290 bits (745), Expect = 3e-98
 Identities = 75/291 (25%), Positives = 137/291 (47%), Gaps = 16/291 (5%)

Query: 3   SFFVLEQEFGCQADMMFCGIFDGHGPWGHFVAKKVRESMPSSLLCNWQETLAEASLLPDI 62
            F +  Q    + D  F G+FDG    G F ++ V++ +   L+ +         +L   
Sbjct: 39  RFTLCPQLVPGRDDCAFFGVFDGTV--GDFASENVKDLVVPQLISSP-AWQEVTEMLRSD 95

Query: 63  DLDSDKKTHRFNIWKHSYVKTCAAVDQE-LEQHRQIDSFYSGTTALTIVRQGEFIMVANV 121
              ++       +   +        D E ++   Q++  Y+ +T++T V    F+ V ++
Sbjct: 96  VPATEVDEKLPQLLDQAVDDMYKNADNELVKMCEQLNKDYASSTSVTAVLAKGFVAVGHL 155

Query: 122 GDSRAVLATTSEDGSLVPVQLTVDFKPNLPYEAERIIQCKGRVFCLEDEPGVHRVWL--- 178
           GDSR  +   + +G L    LTVD KP++P+E  RI++  G V  L +      +     
Sbjct: 156 GDSRIAMGVETPNG-LNCEFLTVDHKPDMPHEKLRIMRNGGSVEYLHNHNNKPFIRGGDF 214

Query: 179 -----PNEECPGLAMSRAFGDYCVKDYGLISVPEVTQRHITSRDQFVVLATDGVWDVISN 233
                  E+   L  SRAFG   +K YGL + P+V    +T + + ++LATDG+WDV+S 
Sbjct: 215 SFRKSRGEQPMQLQYSRAFGGKDLKMYGLSNQPDVRVVRVTPQHRVMILATDGLWDVMSA 274

Query: 234 QEAIQIVSSTPNRAKS-AKRLVECAVHAWKRKRKGIAMDDISAICLFFHSS 283
            +A++I        ++ A+ LVE  +   + + +    D+I+A+ +FF  +
Sbjct: 275 AQAVEIAMQARQEGRNPAQALVEMTLAEQQSRNQS--ADNITAMTVFFKKT 323
>4da1_A Protein phosphatase 1K, mitochondrial; metal-ION-assisted catalysis, dehydrogenase phosphatase, hydrolase; 2.38A {Homo sapiens} PDB: 3qht_A 1l2n_A Length = 389 Back     alignment and structure
>2iq1_A Protein phosphatase 2C kappa, PPM1K; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.25A {Homo sapiens} Length = 274 Back     alignment and structure
>3kdj_B Protein phosphatase 2C 56; ABA, PYL1, abscisic acid signaling pathway, cell membr hydrolase, magnesium, manganese, metal-binding, nucleus; HET: A8S; 1.88A {Arabidopsis thaliana} PDB: 3nmn_B* 3jrq_A* 3ujk_A 3nmv_B 3ujl_B* Length = 316 Back     alignment and structure
>2irm_A Mitogen-activated protein kinase kinase kinase 7 interacting protein 1; TAK1-binding protein, TAB1; 3.00A {Anopheles gambiae} Length = 358 Back     alignment and structure
>2p8e_A PPM1B beta isoform variant 6; structural genomics, hydrolase, PSI-2, protein structure initiative; 1.82A {Homo sapiens} Length = 307 Back     alignment and structure
>1a6q_A Phosphatase 2C; catalytic mechanism, metalloenzyme, transductuin, hydrolase; 2.00A {Homo sapiens} SCOP: a.159.1.1 d.219.1.1 PDB: 3fxk_A 3fxj_A 3fxl_A* 3fxm_A* 3fxo_A Length = 382 Back     alignment and structure
>2i0o_A Ser/Thr phosphatase; beta sandwich, structural genomics, PSI, protei structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Anopheles gambiae} Length = 304 Back     alignment and structure
>2j4o_A Mitogen-activated protein kinase kinase kinase 7-interacting protein 1; TGF-beta, pseudo-phosphatase, TAK1 binding protein, protein binding; 2.25A {Homo sapiens} PDB: 2pom_A 2pop_A Length = 401 Back     alignment and structure
>3qn1_B Protein phosphatase 2C 16; start domain, BET V domain, PYR/PYL/RCAR, PP2C, abscisic ACI receptor, type 2C protein phosphatase; HET: A8S; 1.80A {Arabidopsis thaliana} PDB: 3ujg_B 3nmt_B* 3rt0_A 3kb3_B* Length = 337 Back     alignment and structure
>2pnq_A [pyruvate dehydrogenase [lipoamide]]-phosphatase 1; pyruvate dehydrogenase phosphatase 1, catalytic subunit, PDP1C, hydrolase; 1.81A {Rattus norvegicus} PDB: 3n3c_A 3mq3_A Length = 467 Back     alignment and structure
>3d8k_A PP2C, protein phosphatase 2C; nysgrc, PSI-II, STR genomics, protein structure initiative, NEW YORK structural research consortium, nysgxrc; 2.71A {Toxoplasma gondii} Length = 377 Back     alignment and structure
>2isn_A NYSGXRC-8828Z, phosphatase; pathogenic strain, praseodymium, sulfate structural genomics, PSI-2, protein structure initiative; 1.90A {Toxoplasma gondii} Length = 364 Back     alignment and structure
>2pk0_A Serine/threonine protein phosphatase STP1; SI motif, signaling protein; 2.65A {Streptococcus agalactiae} Length = 250 Back     alignment and structure
>2j82_A TPPHA, protein serine-threonine phosphatase; PP2C family phosphatase, hydrolase; 1.28A {Synechococcus elongatus} PDB: 2j86_A 2y09_A 2xzv_A Length = 240 Back     alignment and structure
>3rnr_A Stage II sporulation E family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.00A {Thermanaerovibrio acidaminovorans} Length = 211 Back     alignment and structure
>1txo_A Putative bacterial enzyme; serine/threonine protein phosphatases, PSTP/PPP, structural genomics, PSI, protein structure initiative; 1.95A {Mycobacterium tuberculosis} SCOP: d.219.1.1 PDB: 2cm1_A Length = 237 Back     alignment and structure
>2jfr_A Ser-Thr phosphatase MSPP; hydrolase, PPM phosphatase, manganese, phosphate; 0.83A {Mycobacterium smegmatis} PDB: 2jfs_A 2jft_A 2v06_A Length = 234 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query296
2iq1_A274 Protein phosphatase 2C kappa, PPM1K; structural ge 100.0
3qn1_B337 Protein phosphatase 2C 16; start domain, BET V dom 100.0
2p8e_A307 PPM1B beta isoform variant 6; structural genomics, 100.0
2i0o_A304 Ser/Thr phosphatase; beta sandwich, structural gen 100.0
3kdj_B316 Protein phosphatase 2C 56; ABA, PYL1, abscisic aci 100.0
2irm_A358 Mitogen-activated protein kinase kinase kinase 7 i 100.0
1a6q_A382 Phosphatase 2C; catalytic mechanism, metalloenzyme 100.0
2i44_A324 Serine-threonine phosphatase 2C; PSI-2, 8817Z, str 100.0
3d8k_A377 PP2C, protein phosphatase 2C; nysgrc, PSI-II, STR 100.0
2j4o_A401 Mitogen-activated protein kinase kinase kinase 7-i 100.0
2pnq_A467 [pyruvate dehydrogenase [lipoamide]]-phosphatase 1 100.0
4da1_A389 Protein phosphatase 1K, mitochondrial; metal-ION-a 100.0
2isn_A364 NYSGXRC-8828Z, phosphatase; pathogenic strain, pra 100.0
2pk0_A250 Serine/threonine protein phosphatase STP1; SI moti 100.0
2j82_A240 TPPHA, protein serine-threonine phosphatase; PP2C 100.0
2jfr_A234 Ser-Thr phosphatase MSPP; hydrolase, PPM phosphata 100.0
1txo_A237 Putative bacterial enzyme; serine/threonine protei 100.0
3rnr_A211 Stage II sporulation E family protein; structural 100.0
3t91_A242 Stage II sporulation protein E; SPOIIE, phosphatas 99.83
3pu9_A242 Protein serine/threonine phosphatase; PSI-biology, 99.79
3f79_A255 Probable two-component response regulator; adaptor 99.66
3zt9_A193 Serine phosphatase; hydrolase, signal transduction 99.63
3ke6_A 399 Protein RV1364C/MT1410; anti-sigma factor, anti-si 99.24
3eq2_A394 Probable two-component response regulator; adaptor 98.23
>2iq1_A Protein phosphatase 2C kappa, PPM1K; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.25A {Homo sapiens} Back     alignment and structure
Probab=100.00  E-value=1.4e-45  Score=324.41  Aligned_cols=233  Identities=29%  Similarity=0.435  Sum_probs=186.9

Q ss_pred             CCeEEEEEeeCCCcCcHHHHHHHHHHhHHHHHHHHHHHHHhhcCCCCCCCcchhhhhhHHHHHHHHHHHHHHHHHHHHhc
Q 022493           15 ADMMFCGIFDGHGPWGHFVAKKVRESMPSSLLCNWQETLAEASLLPDIDLDSDKKTHRFNIWKHSYVKTCAAVDQELEQH   94 (296)
Q Consensus        15 ~~~~l~~V~DG~Gg~G~~~s~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~   94 (296)
                      ++..||+||||||  |+.+|+++++.+.+.+...+..    .                 ..+++++.+++..+++.+.+.
T Consensus        33 ~~~~l~~V~DG~G--G~~~a~~as~~~~~~l~~~~~~----~-----------------~~~~~~l~~a~~~~~~~i~~~   89 (274)
T 2iq1_A           33 DEVLYFAVYDGHG--GPAAADFCHTHMEKCIMDLLPK----E-----------------KNLETLLTLAFLEIDKAFSSH   89 (274)
T ss_dssp             SSEEEEEEEEEES--STHHHHHHHHHHHHHHHHHTTT----C-----------------CCHHHHHHHHHHHHHHHHHHH
T ss_pred             CCeEEEEEECCCC--CHHHHHHHHHHHHHHHHHHhcc----c-----------------ccHHHHHHHHHHHHHHHHHHH
Confidence            5788999999999  9999999999998887643211    0                 023444555555555555432


Q ss_pred             c----CCCCcCCcceEEEEEEEC-CeEEEEEeccCceEEEEecCCCceeEEEcCccCCCCChhhHHHHHHcCCeeEeecC
Q 022493           95 R----QIDSFYSGTTALTIVRQG-EFIMVANVGDSRAVLATTSEDGSLVPVQLTVDFKPNLPYEAERIIQCKGRVFCLED  169 (296)
Q Consensus        95 ~----~~~~~~~GtT~~~~~i~~-~~l~~anvGDSr~~l~~~~~~g~~~~~~lt~dH~~~~~~E~~ri~~~gg~i~~~~~  169 (296)
                      .    ......+|||++++++.+ +++|++|+||||+|++|   +|  ++.+||.||++..+.|+.||.++||.+.... 
T Consensus        90 ~~~~~~~~~~~~GtT~~~~~i~~~~~l~~anvGDSR~~l~r---~g--~~~~lT~DH~~~~~~E~~Ri~~~gG~v~~~~-  163 (274)
T 2iq1_A           90 ARLSADATLLTSGTTATVALLRDGIELVVASVGDSRAILCR---KG--KPMKLTIDHTPERKDEKERIKKCGGFVAWNS-  163 (274)
T ss_dssp             HHC---CCGGGCEECEEEEEEETTTEEEEEEESSCEEEEEE---TT--EEEECCCCCCTTSHHHHHHHHHTTCCEEECT-
T ss_pred             hhhccccCCCCCCCcEEEEEEECCCEEEEEEecCceEEEEe---CC--EeeECCCCCCCcCHHHHHHHHHcCCEEEcCC-
Confidence            2    223456999999999985 69999999999999998   45  5699999999999999999999999998632 


Q ss_pred             CCCceeEecCCCCCCCcccccccCcccccccCccccceeEEEEecCC-CeEEEEecCCCCCCCCHHHHHHHHhcCCChHH
Q 022493          170 EPGVHRVWLPNEECPGLAMSRAFGDYCVKDYGLISVPEVTQRHITSR-DQFVVLATDGVWDVISNQEAIQIVSSTPNRAK  248 (296)
Q Consensus       170 ~~~~~rv~~~~~~~~~l~~tRalGd~~~k~~~v~~~Pdi~~~~l~~~-d~fliL~SDGl~d~l~~~ei~~i~~~~~~~~~  248 (296)
                       .+..|+      .+.+.+||+||+..+|+.+++++|++..+++.++ |+|||||||||||+++++|+.+++.+..++++
T Consensus       164 -~~~~~~------~~~~~ltralGd~~~k~~~v~~~pdi~~~~l~~g~d~~lll~SDGl~d~l~~~ei~~~~~~~~~~~~  236 (274)
T 2iq1_A          164 -LGQPHV------NGRLAMTRSIGDLDLKTSGVIAEPETKRIKLHHADDSFLVLTTDGINFMVNSQEICDFVNQCHDPNE  236 (274)
T ss_dssp             -TSCEEE------TTTBSCSBCEECGGGTTTTCBCCCEEEEEECCTTTEEEEEEECHHHHTTCCHHHHHHHHHTSSSHHH
T ss_pred             -CCceeE------CCeEeeccccCChhhccCCEEeCCEEEEEEeCCCCCcEEEEEccCcccCCCHHHHHHHHHHcCCHHH
Confidence             122333      5678999999999999999999999999999985 67999999999999999999999998888999


Q ss_pred             HHHHHHHHHHHHHHhhcCCCCCCceEEEEEEccCCCCCcccC
Q 022493          249 SAKRLVECAVHAWKRKRKGIAMDDISAICLFFHSSPLSQQVH  290 (296)
Q Consensus       249 ~a~~L~~~a~~~~~~~~~g~~~DNiTvivv~~~~~~~~~~~~  290 (296)
                      +|+.|++.|+.      +| +.|||||||+++.......+.|
T Consensus       237 ~a~~L~~~A~~------~g-~~DNiTvivv~~~~~~~~~~~~  271 (274)
T 2iq1_A          237 AAHAVTEQAIQ------YG-TEDNSTAVVVPFGAWGKEGHHH  271 (274)
T ss_dssp             HHHHHHHHHHH------TT-CCSCEEEEEEECTTC-------
T ss_pred             HHHHHHHHHHH------cC-CCCCeEEEEEEccCCCCCCccc
Confidence            99999999998      57 9999999999999877776655
>3qn1_B Protein phosphatase 2C 16; start domain, BET V domain, PYR/PYL/RCAR, PP2C, abscisic ACI receptor, type 2C protein phosphatase; HET: A8S; 1.80A {Arabidopsis thaliana} PDB: 3zvu_B* 3ujg_B 3nmt_B* 4ds8_B* 3rt0_A 3kb3_B* Back     alignment and structure
>2p8e_A PPM1B beta isoform variant 6; structural genomics, hydrolase, PSI-2, protein structure initiative; 1.82A {Homo sapiens} Back     alignment and structure
>2i0o_A Ser/Thr phosphatase; beta sandwich, structural genomics, PSI, protei structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Anopheles gambiae} Back     alignment and structure
>3kdj_B Protein phosphatase 2C 56; ABA, PYL1, abscisic acid signaling pathway, cell membr hydrolase, magnesium, manganese, metal-binding, nucleus; HET: A8S; 1.88A {Arabidopsis thaliana} PDB: 3nmn_B* 3jrq_A* 3ujk_A 3nmv_B 3ujl_B* Back     alignment and structure
>2irm_A Mitogen-activated protein kinase kinase kinase 7 interacting protein 1; TAK1-binding protein, TAB1; 3.00A {Anopheles gambiae} Back     alignment and structure
>1a6q_A Phosphatase 2C; catalytic mechanism, metalloenzyme, transductuin, hydrolase; 2.00A {Homo sapiens} SCOP: a.159.1.1 d.219.1.1 PDB: 3fxk_A 3fxj_A 3fxl_A* 3fxm_A* 3fxo_A Back     alignment and structure
>2i44_A Serine-threonine phosphatase 2C; PSI-2, 8817Z, structural genomics, protein structure initiative; 2.04A {Toxoplasma gondii} Back     alignment and structure
>3d8k_A PP2C, protein phosphatase 2C; nysgrc, PSI-II, STR genomics, protein structure initiative, NEW YORK structural research consortium, nysgxrc; 2.71A {Toxoplasma gondii} Back     alignment and structure
>2j4o_A Mitogen-activated protein kinase kinase kinase 7-interacting protein 1; TGF-beta, pseudo-phosphatase, TAK1 binding protein, protein binding; 2.25A {Homo sapiens} PDB: 2pom_A 2pop_A Back     alignment and structure
>2pnq_A [pyruvate dehydrogenase [lipoamide]]-phosphatase 1; pyruvate dehydrogenase phosphatase 1, catalytic subunit, PDP1C, hydrolase; 1.81A {Rattus norvegicus} PDB: 3n3c_A 3mq3_A Back     alignment and structure
>4da1_A Protein phosphatase 1K, mitochondrial; metal-ION-assisted catalysis, dehydrogenase phosphatase, hydrolase; 2.38A {Homo sapiens} PDB: 3qht_A 1l2n_A Back     alignment and structure
>2isn_A NYSGXRC-8828Z, phosphatase; pathogenic strain, praseodymium, sulfate structural genomics, PSI-2, protein structure initiative; 1.90A {Toxoplasma gondii} Back     alignment and structure
>2pk0_A Serine/threonine protein phosphatase STP1; SI motif, signaling protein; 2.65A {Streptococcus agalactiae} Back     alignment and structure
>2j82_A TPPHA, protein serine-threonine phosphatase; PP2C family phosphatase, hydrolase; 1.28A {Synechococcus elongatus} PDB: 2j86_A 2y09_A 2xzv_A Back     alignment and structure
>2jfr_A Ser-Thr phosphatase MSPP; hydrolase, PPM phosphatase, manganese, phosphate; 0.83A {Mycobacterium smegmatis} PDB: 2jfs_A 2jft_A 2v06_A Back     alignment and structure
>1txo_A Putative bacterial enzyme; serine/threonine protein phosphatases, PSTP/PPP, structural genomics, PSI, protein structure initiative; 1.95A {Mycobacterium tuberculosis} SCOP: d.219.1.1 PDB: 2cm1_A Back     alignment and structure
>3rnr_A Stage II sporulation E family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.00A {Thermanaerovibrio acidaminovorans} Back     alignment and structure
>3t91_A Stage II sporulation protein E; SPOIIE, phosphatase, manganese binding, PP2C PH domain; HET: GL0 MAN; 2.64A {Bacillus subtilis} PDB: 3t9q_A* Back     alignment and structure
>3pu9_A Protein serine/threonine phosphatase; PSI-biology, MCSG, structural genomics; HET: MSE; 1.55A {Sphaerobacter thermophilus} Back     alignment and structure
>3f79_A Probable two-component response regulator; adaptor, signaling protein; 2.80A {Pseudomonas aeruginosa} PDB: 3es2_A Back     alignment and structure
>3zt9_A Serine phosphatase; hydrolase, signal transduction, protein protein interaction,; HET: PEG; 1.75A {Moorella thermoacetica} Back     alignment and structure
>3ke6_A Protein RV1364C/MT1410; anti-sigma factor, anti-sigma factor antagonist, phosphatase serine kinase, ATPase, unknown function; 2.60A {Mycobacterium tuberculosis} Back     alignment and structure
>3eq2_A Probable two-component response regulator; adaptor sigmas, signaling protein; 3.40A {Pseudomonas aeruginosa} PDB: 3f7a_A Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 296
d1a6qa2295 d.219.1.1 (A:2-296) Protein serine/threonine phosp 1e-28
d1txoa_235 d.219.1.1 (A:) putative serine/threonine phosphata 5e-11
>d1a6qa2 d.219.1.1 (A:2-296) Protein serine/threonine phosphatase 2C, catalytic domain {Human (Homo sapiens) [TaxId: 9606]} Length = 295 Back     information, alignment and structure

class: Alpha and beta proteins (a+b)
fold: PP2C-like
superfamily: PP2C-like
family: PP2C-like
domain: Protein serine/threonine phosphatase 2C, catalytic domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  109 bits (272), Expect = 1e-28
 Identities = 60/270 (22%), Positives = 98/270 (36%), Gaps = 27/270 (10%)

Query: 16  DMMFCGIFDGHGPWGHFVAKKVRESMPSSLLCNWQETLAEASLLPDIDLDSDKKTHRFNI 75
              F  ++DGH   G  VAK   E +   +  N                 +    +  N 
Sbjct: 51  SWSFFAVYDGHA--GSQVAKYCCEHLLDHITNNQD---------FKGSAGAPSVENVKNG 99

Query: 76  WKHSYVKTCAAVDQELEQHRQIDSFYSGTTALTIVRQGEFIMVANVGDSRAVLATTSEDG 135
            +  +++    +    E+    D   SG+TA+ ++   +     N GDSR +L    +  
Sbjct: 100 IRTGFLEIDEHMRVMSEKKHGADR--SGSTAVGVLISPQHTYFINCGDSRGLLCRNRK-- 155

Query: 136 SLVPVQLTVDFKPNLPYEAERIIQCKGRVFCLEDEPGVHRVWLPNEECPGLAMSRAFGDY 195
                  T D KP+ P E ERI    G V             L      G    +     
Sbjct: 156 ---VHFFTQDHKPSNPLEKERIQNAGGSVMI-----QRVNGSLAVSRALGDFDYKCVHGK 207

Query: 196 CVKDYGLISVPEVTQRHIT-SRDQFVVLATDGVWDVISNQEAIQIVSSTPNRAKSAKRLV 254
              +  +   PEV     +   DQF++LA DG+WDV+ N+E    V S        +++ 
Sbjct: 208 GPTEQLVSPEPEVHDIERSEEDDQFIILACDGIWDVMGNEELCDFVRSRLEVTDDLEKVC 267

Query: 255 ECAVHAWKRKRKGIAMDDISAICLFFHSSP 284
              V     K    + D++S I + F ++P
Sbjct: 268 NEVVDTCLYKG---SRDNMSVILICFPNAP 294
>d1txoa_ d.219.1.1 (A:) putative serine/threonine phosphatase pstp/ppp {Mycobacterium tuberculosis [TaxId: 1773]} Length = 235 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query296
d1a6qa2295 Protein serine/threonine phosphatase 2C, catalytic 100.0
d1txoa_235 putative serine/threonine phosphatase pstp/ppp {My 100.0
>d1a6qa2 d.219.1.1 (A:2-296) Protein serine/threonine phosphatase 2C, catalytic domain {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
class: Alpha and beta proteins (a+b)
fold: PP2C-like
superfamily: PP2C-like
family: PP2C-like
domain: Protein serine/threonine phosphatase 2C, catalytic domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.9e-49  Score=349.23  Aligned_cols=244  Identities=29%  Similarity=0.407  Sum_probs=199.7

Q ss_pred             CceeeeeecccC-CCCCeEEEEEeeCCCcCcHHHHHHHHHHhHHHHHHHHHHHHHhhcCCCCCCCcchhhhhhHHHHHHH
Q 022493            1 MCSFFVLEQEFG-CQADMMFCGIFDGHGPWGHFVAKKVRESMPSSLLCNWQETLAEASLLPDIDLDSDKKTHRFNIWKHS   79 (296)
Q Consensus         1 ~~~~~~~~~~~~-~~~~~~l~~V~DG~Gg~G~~~s~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~   79 (296)
                      |..++++..++. ..++..|||||||||  |+.+|+++++.++..|.+++.......             ....+.++++
T Consensus        35 ~ED~~~~~~~~~~~~~~~~lf~V~DGhG--G~~~s~~~~~~l~~~l~~~~~~~~~~~-------------~~~~~~~~~a   99 (295)
T d1a6qa2          35 MEDAHTAVIGLPSGLESWSFFAVYDGHA--GSQVAKYCCEHLLDHITNNQDFKGSAG-------------APSVENVKNG   99 (295)
T ss_dssp             CCEEEEEEEEETTTEEEEEEEEEEEEES--CSHHHHHHHHHHHHHHHTSHHHHCSSS-------------SCCHHHHHHH
T ss_pred             ccCeeEEEcccCCCCCceEEEEEEeCCC--ChHHHHHHHHHHHHHHHHhhhhccccc-------------cchHHHHHHH
Confidence            445555555553 346788999999999  999999999999999986543321110             0122467777


Q ss_pred             HHHHHHHHHHHHHhc--cCCCCcCCcceEEEEEEECCeEEEEEeccCceEEEEecCCCceeEEEcCccCCCCChhhHHHH
Q 022493           80 YVKTCAAVDQELEQH--RQIDSFYSGTTALTIVRQGEFIMVANVGDSRAVLATTSEDGSLVPVQLTVDFKPNLPYEAERI  157 (296)
Q Consensus        80 l~~~~~~~~~~~~~~--~~~~~~~~GtT~~~~~i~~~~l~~anvGDSr~~l~~~~~~g~~~~~~lt~dH~~~~~~E~~ri  157 (296)
                      +.++|..+++.+...  .......+|||++++++.++++|+||+||||+|+++   +|  .+++||.||+|.++.|++|+
T Consensus       100 l~~a~~~~~~~~~~~~~~~~~~~~~GtTa~~~~i~~~~l~vanvGDSR~~l~~---~~--~~~~lT~dH~~~~~~E~~Ri  174 (295)
T d1a6qa2         100 IRTGFLEIDEHMRVMSEKKHGADRSGSTAVGVLISPQHTYFINCGDSRGLLCR---NR--KVHFFTQDHKPSNPLEKERI  174 (295)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTCCCCCEECEEEEEECSSEEEEEEESSCEEEEEE---TT--EEEEECCCCCTTSHHHHHHH
T ss_pred             HHHHHHHHHHHHhhhhhhccCcCCCCCeEEEEEeeCCEEEEEecCCCeEEEee---cc--cceeeccccCcccHHHHhhH
Confidence            777777777766432  223445799999999999999999999999999998   55  56999999999999999999


Q ss_pred             HHcCCeeEeecCCCCceeEecCCCCCCCcccccccCcccccccC--------ccccceeEEEEec-CCCeEEEEecCCCC
Q 022493          158 IQCKGRVFCLEDEPGVHRVWLPNEECPGLAMSRAFGDYCVKDYG--------LISVPEVTQRHIT-SRDQFVVLATDGVW  228 (296)
Q Consensus       158 ~~~gg~i~~~~~~~~~~rv~~~~~~~~~l~~tRalGd~~~k~~~--------v~~~Pdi~~~~l~-~~d~fliL~SDGl~  228 (296)
                      .+.||.+..       .|+      .+.+.+||+|||+.+|..+        ++++|++..+++. +++.||||||||||
T Consensus       175 ~~~gg~v~~-------~r~------~g~l~~tRa~Gd~~~k~~~~~~~~~~~v~~~Pdi~~~~~~~~~~~flvL~SDGl~  241 (295)
T d1a6qa2         175 QNAGGSVMI-------QRV------NGSLAVSRALGDFDYKCVHGKGPTEQLVSPEPEVHDIERSEEDDQFIILACDGIW  241 (295)
T ss_dssp             HHTTCCEET-------TEE------TTTBSCSBCEECGGGSCCTTCCGGGSSSBCCCEEEEEECCTTTEEEEEEECHHHH
T ss_pred             hhcCCcccc-------ccc------CCceeeeeccCcHHhhhccccCcccccccccccceEEEeecccceeEeeecCccc
Confidence            999999874       233      6789999999999998654        8999999999986 56779999999999


Q ss_pred             CCCCHHHHHHHHhc----CCChHHHHHHHHHHHHHHHHhhcCCCCCCceEEEEEEccCCC
Q 022493          229 DVISNQEAIQIVSS----TPNRAKSAKRLVECAVHAWKRKRKGIAMDDISAICLFFHSSP  284 (296)
Q Consensus       229 d~l~~~ei~~i~~~----~~~~~~~a~~L~~~a~~~~~~~~~g~~~DNiTvivv~~~~~~  284 (296)
                      |+|+++|+++++++    ..+++++|++|++.|+.      +| +.||||||||+|++.|
T Consensus       242 d~l~~~ei~~~v~~~~~~~~~~~~~a~~Lv~~A~~------~g-s~DNiTvivv~~~~~~  294 (295)
T d1a6qa2         242 DVMGNEELCDFVRSRLEVTDDLEKVCNEVVDTCLY------KG-SRDNMSVILICFPNAP  294 (295)
T ss_dssp             TTSCHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHH------TT-CCSCEEEEEEECTTSC
T ss_pred             ccCCHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHh------cC-CCCCeEEEEEeccCCC
Confidence            99999999999865    36799999999999998      57 9999999999998765
>d1txoa_ d.219.1.1 (A:) putative serine/threonine phosphatase pstp/ppp {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure