Citrus Sinensis ID: 022522

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290------
Protein Sequence
MVLVNEQRKLSASLPLICRCIISCILVLLTQLTLSLVPRFFAASPFIVQFALSGLVLLLVQTLCGWCRRLLGVCASAPAFVFFNILFIWGFYIAVVRQAVSSLIGGLFNIEVAMIIIGLCSIMSKDPGLITNEFPHLDKLVEGSELGVDPDNENSLSRKRVRYCKICKAHVEGFDHHCPAFGNCIEASYVACSAQFVGKSQNFDKSQSENDWVVNLATSTMLFSILQLLWQAVFFMWHIYCVCFNVRTDEWVNWKKYPEFQVIESEPGESFTRMRFTNPYDKGFLQNVKDFLSLRR
Secondary Structure (PSIPRED)
cccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccHHHHHHccccccccccccccccccccccHHHHHHHccccccccccccccccccHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHcccccccccccccccccccccccccccccHHHHHHHHHHccccc
Secondary Structure Prediction (SSPRO)
cEEEcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHEEEEccccHHHHHHHHHHHHHHHHHHHHHHHccccccEccccHHHHHHHcccccccccccccccccccccccHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHcHccHHccccccccccccEEEEEccccccHHHHHHHHHHHcc
Coil and Loop (DISEMBL)
mvlvneqrklsaslpLICRCIISCILVLLTQLTlslvprffaasPFIVQFALSGLVLLLVQTLCGWCRRLlgvcasapafvFFNILFIWGFYIAVVRQAVSSLIGGLFNIEVAMIIIGLCSimskdpglitnefphldklvegselgvdpdnenslsrKRVRYCKICKAhvegfdhhcpafgnciEASYVACSAQfvgksqnfdksqsenDWVVNLATSTMLFSILQLLWQAVFFMWHIYCVCFNvrtdewvnwkkypefqviesepgesftrmrftnpydkgfLQNVKDFLSLRR
Flexible Loop (DISEMBL)
MVLVNEQRKLSASLPLICRCIISCILVLLTQLTLSLVPRFFAASPFIVQFALSGLVLLLVQTLCGWCRRLLGVCASAPAFVFFNILFIWGFYIAVVRQAVSSLIGGLFNIEVAMIIIGLCSIMSKDPGLITNEFPHLDKLVegselgvdpdnenslsrkRVRYCKICKAHVEGFDHHCPAFGNCIEASYVACSAQFVGKSQNFDKSQSENDWVVNLATSTMLFSILQLLWQAVFFMWHIYCVCFNVRTDEWVNWKKYPEFqviesepgesFTRMrftnpydkgflqnvkdflslrr
Low Complexity Region (SEG)
MVLVNEQRKLSASLPLICRCIISCIlvlltqltlslvPRFFAASPFIVQFALSGlvlllvQTLCGWCRRLLGVCASAPAFVFFNILFIWGFYIAVVRQAVSSLIGGLFNIEVAMIIIGLCSIMSKDPGLITNEFPHLDKLVEGSELGVDPDNENSLSRKRVRYCKICKAHVEGFDHHCPAFGNCIEASYVACSAQFVGKSQNFDKSQSENDWVVNLATSTMLFSILQLLWQAVFFMWHIYCVCFNVRTDEWVNWKKYPEFQVIESEPGESFTRMRFTNPYDKGFLQNVKDFLSLRR
Disordered region (IsUnstruct)
***********ASLPLICRCIISCILVLLTQLTLSLVPRFFAASPFIVQFALSGLVLLLVQTLCGWCRRLLGVCASAPAFVFFNILFIWGFYIAVVRQAVSSLIGGLFNIEVAMIIIGLCSIMSKDPGLITNEFPHLDKLVE****************KRVRYCKICKAHVEGFDHHCPAFGNCIEASYVACSAQFVGKSQNF*****ENDWVVNLATSTMLFSILQLLWQAVFFMWHIYCVCFNVRTDEWVNWKKYPEFQVIESE***SFTRMRFTNPYDKGFLQNVKDF*****
Disordered Region (DISOPRED)
*************LPLICRCIISCILVLLTQLTLSLVPRFFAASPFIVQFALSGLVLLLVQTLCGWCRRLLGVCASAPAFVFFNILFIWGFYIAVVRQAVSSLIGGLFNIEVAMIIIGLCSIMSKDPGLITNEFPHLDKLVEGSELGVDPDNENSLSRKRVRYCKICKAHVEGFDHHCPAFGNCIEASYVACSAQFVGKSQNFDKSQSENDWVVNLATSTMLFSILQLLWQAVFFMWHIYCVCFNVRTDEWVNWKKYPEFQVI*******FTRMRFTNPYDKGFLQNVKDFLSLRR
Disordered Region (DISEMBL)
********KLSASLPLICRCIISCILVLLTQLTLSLVPRFFAASPFIVQFALSGLVLLLVQTLCGWCRRLLGVCASAPAFVFFNILFIWGFYIAVVRQAVSSLIGGLFNIEVAMIIIGLCSIMSKDPGLITNEFPHLDKLVEGSELGVDPDNENSLSRKRVRYCKICKAHVEGFDHHCPAFGNCIEASYVACSAQFVGKSQNFDKSQSENDWVVNLATSTMLFSILQLLWQAVFFMWHIYCVCFNVRTDEWVNWKKYPEFQVIESEPGESFTRMRFTNPYDKGFLQNVKDFLSLRR
Disordered Region (DISPRO)
*******RKLSASLPLICRCIISCILVLLTQLTLSLVPRFFAASPFIVQFALSGLVLLLVQTLCGWCRRLLGVCASAPAFVFFNILFIWGFYIAVVRQAVSSLIGGLFNIEVAMIIIGLCSIMSKDPGLITNEFPHLDKLVEGSELGVDPDNENSLSRKRVRYCKICKAHVEGFDHHCPAFGNCIEASYVACSAQFVGKSQNFDKSQSENDWVVNLATSTMLFSILQLLWQAVFFMWHIYCVCFNVRTDEWVNWKKYPEFQVIESEPGESFTRMRFTNPYDKGFLQNVKDFLSLRR
Transmembrane Helix (TMHMM)
iiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooHHHHHHHHHHHHHHHHHHHHHHHHiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSiiHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHHHHHHHHHHHiiiHHHHHHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MVLVNEQRKLSASLPLICRCIISCILVLLTQLTLSLVPRFFAASPFIVQFALSGLVLLLVQTLCGWCRRLLGVCASAPAFVFFNILFIWGFYIAVVRQAVSSLIGGLFNIEVAMIIIGLCSIMSKDPGLITNEFPHLDKLVEGSELGVDPDNENSLSRKRVRYCKICKAHVEGFDHHCPAFGNCIEASYVACSAQFVGKSQNFDKSQSENDWVVNLATSTMLFSILQLLWQAVFFMWHIYCVCFNVRTDEWVNWKKYPEFQVIESEPGESFTRMRFTNPYDKGFLQNVKDFLSLRR
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	296	2.2.26 [Sep-21-2011]
Q80TN5	632	Palmitoyltransferase ZDHH	yes	no	0.543	0.254	0.247	2e-07
Q8IUH5	632	Palmitoyltransferase ZDHH	yes	no	0.543	0.254	0.242	4e-07
Q3EC11	536	Probable S-acyltransferas	yes	no	0.418	0.231	0.251	6e-06
Q9NYG2	327	Palmitoyltransferase ZDHH	no	no	0.297	0.269	0.315	0.0002
Q8R173	299	Palmitoyltransferase ZDHH	no	no	0.297	0.294	0.305	0.0003

>sp|Q80TN5|ZDH17_MOUSE Palmitoyltransferase ZDHHC17 OS=Mus musculus GN=Zdhhc17 PE=1 SV=2

 Score = 56.6 bits (135), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 50/202 (24%), Positives = 78/202 (38%), Gaps = 41/202 (20%)

Query: 126 DPGLITNEFPHLDK----LVEGSELGVDPDNENSLSRKRVR--YCKICKAHVEGFDHHCP 179
           DPG+I        K    L E   L +       L RK VR  +C +C   +  FDHHCP
Sbjct: 409 DPGIIKATEEQKKKTIVELAETGSLDLSIFCSTCLIRKPVRSKHCGVCNRCIAKFDHHCP 468

Query: 180 AFGNCIEAS-------------------YVACSAQFVGKSQNFDKSQSENDWVVNLATST 220
             GNC+ A                       C + +    +          ++  +AT +
Sbjct: 469 WVGNCVGAGNHRYFMGYLFFLLFMICWMIYGCVSYWGLHCETTYTKDGFWTYITQIATCS 528

Query: 221 ------MLFSILQLLWQAVFFMWHIYCV-CFNVRTDEWVNWKKYPEFQVIESEPGESFTR 273
                  L S+   LW AV  M  +Y + C  + T+E +N ++Y  F+V         T 
Sbjct: 529 PWMFWMFLNSVFHFLWVAVLLMCQLYQITCLGITTNERMNARRYKHFKV---------TT 579

Query: 274 MRFTNPYDKGFLQNVKDFLSLR 295
               +P++ G ++N+ DF   R
Sbjct: 580 TSIESPFNHGCVRNIIDFFEFR 601

Palmitoyltransferase specific for a subset of neuronal proteins, including SNAP25, DLG4/PSD95, GAD2, SYT1 and HD. May be involved in the sorting or targeting of critical proteins involved in the initiating events of endocytosis at the plasma membrane. Has transforming activity. Mediates Mg(2+) transport.
Mus musculus (taxid: 10090)
EC: 2EC: .EC: 3EC: .EC: 1EC: .EC: -

>sp|Q8IUH5|ZDH17_HUMAN Palmitoyltransferase ZDHHC17 OS=Homo sapiens GN=ZDHHC17 PE=1 SV=2

 Score = 55.8 bits (133), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 49/202 (24%), Positives = 78/202 (38%), Gaps = 41/202 (20%)

Query: 126 DPGLITNEFPHLDK----LVEGSELGVDPDNENSLSRKRVR--YCKICKAHVEGFDHHCP 179
           DPG+I        K    L E   L +       L RK VR  +C +C   +  FDHHCP
Sbjct: 409 DPGIIKATEEQKKKTIVELAETGSLDLSIFCSTCLIRKPVRSKHCGVCNRCIAKFDHHCP 468

Query: 180 AFGNCIEAS-------------------YVACSAQFVGKSQNFDKSQSENDWVVNLATST 220
             GNC+ A                       C + +    +          ++  +AT +
Sbjct: 469 WVGNCVGAGNHRYFMGYLFFLLFMICWMIYGCISYWGLHCETTYTKDGFWTYITQIATCS 528

Query: 221 ------MLFSILQLLWQAVFFMWHIYCV-CFNVRTDEWVNWKKYPEFQVIESEPGESFTR 273
                  L S+   +W AV  M  +Y + C  + T+E +N ++Y  F+V         T 
Sbjct: 529 PWMFWMFLNSVFHFMWVAVLLMCQMYQISCLGITTNERMNARRYKHFKV---------TT 579

Query: 274 MRFTNPYDKGFLQNVKDFLSLR 295
               +P++ G ++N+ DF   R
Sbjct: 580 TSIESPFNHGCVRNIIDFFEFR 601

Palmitoyltransferase specific for a subset of neuronal proteins, including SNAP25, DLG4/PSD95, GAD2, SYT1 and HD. May be involved in the sorting or targeting of critical proteins involved in the initiating events of endocytosis at the plasma membrane. Has transforming activity. Mediates Mg(2+) transport.

Homo sapiens (taxid: 9606)

EC: 2

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: -

>sp|Q3EC11|ZDHC2_ARATH Probable S-acyltransferase At2g14255 OS=Arabidopsis thaliana GN=At2g14255 PE=2 SV=2

 Score = 51.6 bits (122), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 39/155 (25%), Positives = 60/155 (38%), Gaps = 31/155 (20%)

Query: 160 RVRYCKICKAHVEGFDHHCPAFGNCIEAS---------YVACSAQFVGKS-------QNF 203
           R ++C  CK  VE FDHHCP   NC+             +     FVG +       +  
Sbjct: 375 RSKHCPTCKRCVEQFDHHCPWISNCVGKKNKRYFLVFVIMGALTSFVGGTTAVQRLWRGI 434

Query: 204 DKSQSENDWVVNL------ATSTMLFSILQLLWQAVFFMWHIYCVCFNVRTDEWVNWKKY 257
            +      W+ ++      A   + F +L  +      +   Y +  N+ T+E  N K+ 
Sbjct: 435 PQVHHGESWIKHIVIEHPDAAVFLFFDLLIFIATMTLTISQSYMIARNITTNELWNAKR- 493

Query: 258 PEFQVIESEPGESFTRMRFTNPYDKGFLQNVKDFL 292
             F  +    G      RF NPY+ G  +N  DFL
Sbjct: 494 --FSYLRGPDG------RFYNPYNHGLRRNCTDFL 520

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: -

>sp|Q9NYG2|ZDHC3_HUMAN Palmitoyltransferase ZDHHC3 OS=Homo sapiens GN=ZDHHC3 PE=1 SV=1

 Score = 46.6 bits (109), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 30/95 (31%), Positives = 43/95 (45%), Gaps = 7/95 (7%)

Query: 97  RQAVSSLIGGL-FNIEVAMIIIGLCSIMSKDPGLI-----TNEFPHLDKLVEGSELGVDP 150
           R  V S+I G+ FN+   + +   C  M  DPG +     T EF    +L  G  +   P
Sbjct: 71  RDYVYSIINGIVFNLLAFLALASHCRAMLTDPGAVPKGNATKEFIESLQLKPGQVVYKCP 130

Query: 151 DNENSLSRKRVRYCKICKAHVEGFDHHCPAFGNCI 185
               S+   R  +C +CK  +   DHHCP   NC+
Sbjct: 131 KC-CSIKPDRAHHCSVCKRCIRKMDHHCPWVNNCV 164

Palmitoyltransferase with broad specificity. Palmitoylates GABA receptors on their gamma subunit (GABRG1, GABRG2 and GABRG3), which regulates synaptic clustering and/or cell surface stability. Palmitoylates glutamate receptors GRIA1 and GRIA2, which leads to their retention in Golgi.

Homo sapiens (taxid: 9606)

EC: 2

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: -

>sp|Q8R173|ZDHC3_MOUSE Palmitoyltransferase ZDHHC3 OS=Mus musculus GN=Zdhhc3 PE=1 SV=1

 Score = 45.8 bits (107), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 29/95 (30%), Positives = 42/95 (44%), Gaps = 7/95 (7%)

Query: 97  RQAVSSLIGGL-FNIEVAMIIIGLCSIMSKDPGLI-----TNEFPHLDKLVEGSELGVDP 150
           R    S+I G+ FN+   + +   C  M  DPG +     T EF    +L  G  +   P
Sbjct: 71  RDYAYSIINGIVFNLLAFLALASHCRAMLTDPGAVPKGNATKEFIESLQLKPGQVVYKCP 130

Query: 151 DNENSLSRKRVRYCKICKAHVEGFDHHCPAFGNCI 185
               S+   R  +C +CK  +   DHHCP   NC+
Sbjct: 131 KC-CSIKPDRAHHCSVCKRCIRKMDHHCPWVNNCV 164

Palmitoyltransferase with broad specificity. Palmitoylates GABA receptors on their gamma subunit (GABRG1, GABRG2 and GABRG3), which regulates synaptic clustering and/or cell surface stability. Palmitoylates glutamate receptors GRIA1 and GRIA2, which leads to their retention in Golgi.

Mus musculus (taxid: 10090)

EC: 2

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: -

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	296
297746095	311	unnamed protein product [Vitis vinifera]	0.956	0.909	0.523	3e-79
255585828	291	zinc finger protein, putative [Ricinus c	0.773	0.786	0.498	2e-67
357112878	313	PREDICTED: palmitoyltransferase ZDHHC17-	0.929	0.878	0.433	2e-66
225434978	311	PREDICTED: probable S-acyltransferase At	0.918	0.874	0.455	1e-65
226495287	315	DHHC zinc finger domain containing prote	0.956	0.898	0.412	1e-63
195619870	315	DHHC zinc finger domain containing prote	0.956	0.898	0.409	4e-63
218192534	328	hypothetical protein OsI_10951 [Oryza sa	0.824	0.743	0.450	9e-61
222624656	370	hypothetical protein OsJ_10323 [Oryza sa	0.905	0.724	0.419	3e-60
414866097	300	TPA: hypothetical protein ZEAMMB73_41357	0.905	0.893	0.412	6e-60
224106499	251	predicted protein [Populus trichocarpa]	0.591	0.697	0.567	6e-59

>gi|297746095|emb|CBI16151.3| unnamed protein product [Vitis vinifera]

 Score =  301 bits (770), Expect = 3e-79,   Method: Compositional matrix adjust.
 Identities = 158/302 (52%), Positives = 199/302 (65%), Gaps = 19/302 (6%)

Query: 1   MVLVNEQRKLSASLPLICRCIISCILVLLTQLTLSLVPRFFAASPFIVQFALSGLVLLLV 60
           M+++++Q+ +  SL LI RC+ISCI V LTQ  LS+VPRFFAAS  ++Q  LS L+LL++
Sbjct: 1   MLVLDDQKSMRISLKLIGRCMISCIFVFLTQFALSIVPRFFAASSLLIQLPLSALLLLVL 60

Query: 61  QTLCGWCRRLLGVCASAPAFVFFNILFIWGFYIAVVRQAVSSLIGGLFNIEVAMIIIGLC 120
                 CRR LGV ASAPAFVFFN+LFIWG YI ++R+ +S L+G + N E+ M+IIGL 
Sbjct: 61  LGAGRCCRRFLGVYASAPAFVFFNLLFIWGVYIVILRKVISPLMGIVLNGEIVMLIIGLY 120

Query: 121 SIMSKDPGLITNEFPHLDKLVEGSELGVDPDNENSLSRKRVRYCKICKAHVEGFDHHCPA 180
           SI+S DPG +T+     D   E S    +   E S S +RVRYCK CKA+V+GFDHHCPA
Sbjct: 121 SILSSDPGFVTSRSSCSDNHAEDSFSEDEAHFEGSFSSRRVRYCKSCKAYVKGFDHHCPA 180

Query: 181 FGNCI------------------EASYVACSAQFVGKSQNFDKSQSENDWVVNLATSTML 222
           FGNCI                  EASY+  S +F  K Q  D++  E     NL  STML
Sbjct: 181 FGNCIGQKNHVLFMVLLVGFVITEASYIMDSFKFATKFQKMDETGQETSLSENLVISTML 240

Query: 223 FSILQLLWQAVFFMWHIYCVCFNVRTDEWVNWKKYPEFQ-VIESEPGESFTRMRFTNPYD 281
           F +LQ+LWQ VF  WHIYCVC N+RTDEW+NWKKYPEFQ +I  +PG S    RF NPY+
Sbjct: 241 FCLLQVLWQGVFLTWHIYCVCVNIRTDEWINWKKYPEFQIIIPIQPGLSSEGRRFRNPYN 300

Query: 282 KG 283
           K 
Sbjct: 301 KA 302

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255585828|ref|XP_002533592.1| zinc finger protein, putative [Ricinus communis] gi|223526536|gb|EEF28797.1| zinc finger protein, putative [Ricinus communis]

 Score =  261 bits (668), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 141/283 (49%), Positives = 173/283 (61%), Gaps = 54/283 (19%)

Query: 4   VNEQRKLSASLPLICRCIISCILVLLTQLTLSLVPRFFAASPFIVQFALSGLVLLLVQTL 63
           + ++R+  A LP   RC +S ILVLLTQ +LSL+PRFF+AS F++Q  LSG+V+L V   
Sbjct: 1   MQQERRKEALLPKFGRCTVSSILVLLTQFSLSLIPRFFSASSFLLQLTLSGIVVLFVLGF 60

Query: 64  CGWCRRLLGVCASAPAFVFFNILFIWGFYIAVVRQAVSSLIGGLFNIEVAMIIIGLCSIM 123
             WCRRLLGV ASAPAFVF N+LFIW  Y  VVR AV   +  +F+ EV M+ IG     
Sbjct: 61  GRWCRRLLGVHASAPAFVFLNLLFIWSVYFCVVRPAVPFFMDAIFSGEVVMLFIG----- 115

Query: 124 SKDPGLITNEFPHLDKLVEGSELGVDPDNENSLSRKRVRYCKICKAHVEGFDHHCPAFGN 183
             DP L+                            KRVRYCK CKA+V+GFDHHCPAFGN
Sbjct: 116 --DPLLL----------------------------KRVRYCKSCKAYVKGFDHHCPAFGN 145

Query: 184 CI------------------EASYVACSAQFVGKSQNFDKSQSENDWVVNLATSTMLFSI 225
           CI                  EASY+ CS QFV  SQ    ++ E      L T TMLF++
Sbjct: 146 CIGQSNHALFMVLLLGFLSTEASYIMCSLQFVRGSQIEPVTRFELGLRGTLVTGTMLFTL 205

Query: 226 LQLLWQAVFFMWHIYCVCFNVRTDEWVNWKKYPEFQVI-ESEP 267
           LQ+LWQ +F  WHIYC+CFN+RTDEW+NWKKYPEFQVI +S+P
Sbjct: 206 LQVLWQGIFMAWHIYCICFNIRTDEWINWKKYPEFQVIAQSQP 248

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357112878|ref|XP_003558232.1| PREDICTED: palmitoyltransferase ZDHHC17-like [Brachypodium distachyon]

 Score =  258 bits (660), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 128/295 (43%), Positives = 185/295 (62%), Gaps = 20/295 (6%)

Query: 16  LICRCIISCILVLLTQLTLSLVPRFFAASPFIVQFALSGLVLLLVQTLCGWCRRLLGVCA 75
           ++   ++SC LVL +QL ++ VPRFF +   +    ++GLV L    +  + RR +GV A
Sbjct: 18  VVLSALVSCGLVLFSQLAVATVPRFFPSLSLLAMLPVAGLVFLAAIVVGRFWRRFIGVAA 77

Query: 76  SAPAFVFFNILFIWGFYIAVVRQAVSSLIGGLFNIEVAMIIIGLCSIMSKDPGLITNEFP 135
           SAP FV FN+LF+WG YI V+R   SSL+  L N E A+++ GL  I+S DPG++  E  
Sbjct: 78  SAPLFVLFNVLFMWGVYIFVIRGDTSSLLDMLINAECALLLWGLYRILSGDPGIVAYESS 137

Query: 136 HLDKLVEGSELGVDPDNENSLSRKRVRYCKICKAHVEGFDHHCPAFGNCI---------- 185
            L++      +     +E   S  RVR+C  CKA+V G+DHHCPAFGNCI          
Sbjct: 138 FLEEAGCNDFVDAICSSEKHPSLSRVRHCNSCKANVRGYDHHCPAFGNCIGQKNHRLFIA 197

Query: 186 --------EASYVACSAQFVGKSQNFDKSQSENDWVVNLATSTMLFSILQLLWQAVFFMW 237
                   E++Y  CS +++ +  N    ++EN   +N+   TMLFS+LQ+LWQ VF +W
Sbjct: 198 LLTGFVVAESTYTMCSTKYITRCINSGTIRTENPLSLNMVIGTMLFSVLQVLWQVVFLIW 257

Query: 238 HIYCVCFNVRTDEWVNWKKYPEFQVIESEPGESFTRMRFTNPYDKGFLQNVKDFL 292
           H+Y +CFN++TDEW+NWKKYPEFQ+ E EP +S + ++F NPYDKG L N+++FL
Sbjct: 258 HVYGICFNIKTDEWINWKKYPEFQMKE-EP-QSDSEIKFVNPYDKGMLCNIREFL 310

Source: Brachypodium distachyon

Species: Brachypodium distachyon

Genus: Brachypodium

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225434978|ref|XP_002281137.1| PREDICTED: probable S-acyltransferase At2g14255-like [Vitis vinifera]

 Score =  255 bits (652), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 150/329 (45%), Positives = 194/329 (58%), Gaps = 57/329 (17%)

Query: 1   MVLVNEQRKLSASLPLICRCIISCILVLLTQLTLSLVPRFFAASPFIVQFALSGLVLLLV 60
           M+++++Q+ +  SL LI RC+ISCI V LTQ  LS+VPRFFAAS  ++Q  LS L+LL++
Sbjct: 1   MLVLDDQKSMRISLKLIGRCMISCIFVFLTQFALSIVPRFFAASSLLIQLPLSALLLLVL 60

Query: 61  QTLCGWCRRLLGVCASAPAFVFFNILFIWGFYIAVVRQAVSSLIGGLFNIEVAMIIIGLC 120
                 CRR LGV ASAPAFVFFN+LFIWG YI ++R+ +S L+G + N E+ M+IIGL 
Sbjct: 61  LGAGRCCRRFLGVYASAPAFVFFNLLFIWGVYIVILRKVISPLMGIVLNGEIVMLIIGLY 120

Query: 121 SIMSKDPGLITN---------------EFPHLD--KLVEGSELGVDPDNENSLSRKRVRY 163
           SI+S DPG +T+               +  H +  K + G      P  E S S +RVRY
Sbjct: 121 SILSSDPGFVTSRSSCSDNHAEDSFSEDEAHFEILKTLTGGTCHEHP-TEGSFSSRRVRY 179

Query: 164 CKICKAHVEGFDHHCPAFGNCI------------------EASYVACSAQFVGKSQNFDK 205
           CK CKA+V+GFDHHCPAFGNCI                  EASY+  S +F  K Q  D+
Sbjct: 180 CKSCKAYVKGFDHHCPAFGNCIGQKNHVLFMVLLVGFVITEASYIMDSFKFATKFQKMDE 239

Query: 206 SQSENDWVVNLATSTMLFSILQLLWQAVFFMWHIYCVCFNVRTDEWVNWKKYPEFQ-VIE 264
           +  E     NL  STMLF +LQ+LWQ                    +NWKKYPEFQ +I 
Sbjct: 240 TGQETSLSENLVISTMLFCLLQVLWQ--------------------INWKKYPEFQIIIP 279

Query: 265 SEPGESFTRMRFTNPYDKGFLQNVKDFLS 293
            +PG S    RF NPY+KG   N+KDFL+
Sbjct: 280 IQPGLSSEGRRFRNPYNKGVFCNMKDFLA 308

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|226495287|ref|NP_001148505.1| DHHC zinc finger domain containing protein [Zea mays] gi|223945801|gb|ACN26984.1| unknown [Zea mays] gi|414866098|tpg|DAA44655.1| TPA: DHHC zinc finger domain containing protein [Zea mays]

 Score =  249 bits (635), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 125/303 (41%), Positives = 181/303 (59%), Gaps = 20/303 (6%)

Query: 8   RKLSASLPLICRCIISCILVLLTQLTLSLVPRFFAASPFIVQFALSGLVLLLVQTLCGWC 67
           R+ S+   ++   + SC LVL +QL +++VPR F     +    ++GLV +    L    
Sbjct: 12  RRSSSQWEVLWSALASCGLVLFSQLAVAMVPRLFPFLSLLAMLPIAGLVFIAAIVLGRLW 71

Query: 68  RRLLGVCASAPAFVFFNILFIWGFYIAVVRQAVSSLIGGLFNIEVAMIIIGLCSIMSKDP 127
           RR +GV ASAP FV FNIL +WG Y+ V+R+  SSL+  L N E A+++ G   I+S DP
Sbjct: 72  RRFIGVAASAPLFVLFNILLLWGVYVFVIRRETSSLLDMLINAECALLLWGFYRILSGDP 131

Query: 128 GLITNEFPHLDKLVEGSELGVDPDNENSLSRKRVRYCKICKAHVEGFDHHCPAFGNCI-- 185
           G++  +  +L++      +     +E      RVR C  CKA++ G+DHHCPAFG CI  
Sbjct: 132 GIVACDSSYLEEAGCKDFVEAIYSSEKLPMLSRVRQCTWCKANIRGYDHHCPAFGTCIGQ 191

Query: 186 ----------------EASYVACSAQFVGKSQNFDKSQSENDWVVNLATSTMLFSILQLL 229
                           E++Y  CS +++ +  +    +SEN   +N+  ST LFSILQ+L
Sbjct: 192 KNHRLFMALLTGFVVAESTYTMCSTKYITRCISSGTIRSENPVSLNIVISTTLFSILQVL 251

Query: 230 WQAVFFMWHIYCVCFNVRTDEWVNWKKYPEFQVIESEPGESFTRMRFTNPYDKGFLQNVK 289
           WQ VF MWHIYC+CFN++TDEW+NWKKYPEFQ+ E    +S   ++F NPYDKG L N++
Sbjct: 252 WQIVFLMWHIYCICFNIKTDEWINWKKYPEFQMKEQPRSDS--EVKFVNPYDKGMLCNIR 309

Query: 290 DFL 292
           +FL
Sbjct: 310 EFL 312

Source: Zea mays

Species: Zea mays

Genus: Zea

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|195619870|gb|ACG31765.1| DHHC zinc finger domain containing protein [Zea mays]

 Score =  247 bits (631), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 124/303 (40%), Positives = 180/303 (59%), Gaps = 20/303 (6%)

Query: 8   RKLSASLPLICRCIISCILVLLTQLTLSLVPRFFAASPFIVQFALSGLVLLLVQTLCGWC 67
           R+ S+   ++   + SC LVL +QL +++VPR F     +    ++GLV +    L    
Sbjct: 12  RRSSSQWEVLWSALASCGLVLFSQLAVAMVPRLFPFLSLLAMLPIAGLVFIAAIVLGRLW 71

Query: 68  RRLLGVCASAPAFVFFNILFIWGFYIAVVRQAVSSLIGGLFNIEVAMIIIGLCSIMSKDP 127
           RR +GV ASAP FV FNIL +WG Y+ V+R+  SSL+  L N E  +++ G   I+S DP
Sbjct: 72  RRFIGVAASAPLFVLFNILLLWGVYVFVIRRETSSLLDMLINAECTLLLWGFYRILSGDP 131

Query: 128 GLITNEFPHLDKLVEGSELGVDPDNENSLSRKRVRYCKICKAHVEGFDHHCPAFGNCI-- 185
           G++  +  +L++      +     +E      RVR C  CKA++ G+DHHCPAFG CI  
Sbjct: 132 GIVACDSSYLEEAGCKDFVEAIYSSEKLPMLSRVRQCTWCKANIRGYDHHCPAFGTCIGQ 191

Query: 186 ----------------EASYVACSAQFVGKSQNFDKSQSENDWVVNLATSTMLFSILQLL 229
                           E++Y  CS +++ +  +    +SEN   +N+  ST LFSILQ+L
Sbjct: 192 KNHRLFMALLTGFVVAESTYTMCSTKYITRCISSGTIRSENPVSLNIVISTTLFSILQVL 251

Query: 230 WQAVFFMWHIYCVCFNVRTDEWVNWKKYPEFQVIESEPGESFTRMRFTNPYDKGFLQNVK 289
           WQ VF MWHIYC+CFN++TDEW+NWKKYPEFQ+ E    +S   ++F NPYDKG L N++
Sbjct: 252 WQIVFLMWHIYCICFNIKTDEWINWKKYPEFQMKEQPRSDS--EVKFVNPYDKGMLCNIR 309

Query: 290 DFL 292
           +FL
Sbjct: 310 EFL 312

Source: Zea mays

Species: Zea mays

Genus: Zea

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|218192534|gb|EEC74961.1| hypothetical protein OsI_10951 [Oryza sativa Indica Group]

 Score =  239 bits (611), Expect = 9e-61,   Method: Compositional matrix adjust.
 Identities = 118/262 (45%), Positives = 163/262 (62%), Gaps = 18/262 (6%)

Query: 21  IISCILVLLTQLTLSLVPRFFAASPFIVQFALSGLVLLLVQTLCGWCRRLLGVCASAPAF 80
           + SC L LL+QL +++VPR F +   +    ++G+V L V  +  + RR +GV ASAP F
Sbjct: 25  LASCGLTLLSQLAVAMVPRLFPSLSLLAMLPVAGVVFLAVIVVGRFWRRFIGVAASAPLF 84

Query: 81  VFFNILFIWGFYIAVVRQAVSSLIGGLFNIEVAMIIIGLCSIMSKDPGLITNEFPHLDKL 140
           V FNILF+WG Y+ V+R   SSL+  + N E AM++ GL  I S DPG++T E    ++ 
Sbjct: 85  VLFNILFLWGVYVFVIRGGTSSLLDMVINAECAMLLFGLYRIFSGDPGIVTYESSFFEEA 144

Query: 141 VEGSELGVDPDNENSLSRKRVRYCKICKAHVEGFDHHCPAFGNCI--------------- 185
                +     +E   S  RVR+C  CKA+V G+DHHCPAFGNCI               
Sbjct: 145 GCKDFVEAICPSEKFSSLPRVRHCNCCKANVRGYDHHCPAFGNCIGQKNHRLFMALLTGF 204

Query: 186 ---EASYVACSAQFVGKSQNFDKSQSENDWVVNLATSTMLFSILQLLWQAVFFMWHIYCV 242
              E++Y  CS +++ +  N    +SEN   VN+   TMLFS+LQ+LWQAVF +WHIYC+
Sbjct: 205 VVAESTYTMCSTKYITRCINSGTIRSENPMSVNMVIGTMLFSVLQVLWQAVFLIWHIYCI 264

Query: 243 CFNVRTDEWVNWKKYPEFQVIE 264
           CFN++TDEW+NWKKYPEFQ+ E
Sbjct: 265 CFNIKTDEWINWKKYPEFQMKE 286

Source: Oryza sativa Indica Group

Species: Oryza sativa

Genus: Oryza

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|222624656|gb|EEE58788.1| hypothetical protein OsJ_10323 [Oryza sativa Japonica Group]

 Score =  238 bits (607), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 125/298 (41%), Positives = 176/298 (59%), Gaps = 30/298 (10%)

Query: 21  IISCILVLLTQLTLSLVPRFFAASPFIVQFALSGLVLLLVQTLCGWCRRLLGVCASAPAF 80
           + SC L LL+QL +++VPR F +   +    ++G+V L V  +  + RR +GV ASAP F
Sbjct: 25  LASCGLTLLSQLAVAMVPRLFPSLSLLAMLPVAGVVFLAVIVVGRFWRRFIGVAASAPLF 84

Query: 81  VFFNILFIWGFYIAVVRQAVSSLIGGLFNIEVAMIIIGLCSIMSKDPGLITNEFPHLDKL 140
           V FNILF+WG Y+ V+R   SSL+  + N E AM++ GL  I S DPG++  E    ++ 
Sbjct: 85  VLFNILFLWGVYVFVIRGGTSSLLDMVINAECAMLLFGLYRIFSGDPGIVIYESSFFEEA 144

Query: 141 VEGSELGVDPDNENSLSRKRVRYCKICKAHVEGFDHHCPAFGNCI--------------- 185
                +     +E   S  RVR+C  CKA+V G+DHHCPAFGNCI               
Sbjct: 145 GCKDFVEAICPSEKFSSLPRVRHCNCCKANVRGYDHHCPAFGNCIGQKNHRLFMALLTGF 204

Query: 186 ---EASYVACSAQFVGKSQNFDKSQSENDWVVNLATSTMLFSILQLLWQAVFFMWHIYCV 242
              E++Y  CS +++ +  N    +SEN   VN+   TMLFS+LQ+LWQAVF +WHIYC+
Sbjct: 205 VVAESTYTMCSTKYITRCINSGTIRSENPMSVNMVIGTMLFSVLQVLWQAVFLIWHIYCI 264

Query: 243 CFNVRTDEWVNWKKYPEFQVIESE----PGESFTRMRFTNPYDKGFLQNVKDFLSLRR 296
           CFN++TDEW+NWKKYPEFQ+ E      P E   ++R T         NV+ FL +++
Sbjct: 265 CFNIKTDEWINWKKYPEFQMKEQPQSDVPLEKNGQVRRT--------WNVRTFLIMQK 314

Source: Oryza sativa Japonica Group

Species: Oryza sativa

Genus: Oryza

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|414866097|tpg|DAA44654.1| TPA: hypothetical protein ZEAMMB73_413571 [Zea mays]

 Score =  237 bits (604), Expect = 6e-60,   Method: Compositional matrix adjust.
 Identities = 125/303 (41%), Positives = 177/303 (58%), Gaps = 35/303 (11%)

Query: 8   RKLSASLPLICRCIISCILVLLTQLTLSLVPRFFAASPFIVQFALSGLVLLLVQTLCGWC 67
           R+ S+   ++   + SC LVL +QL +++VPR      FI    L  L          W 
Sbjct: 12  RRSSSQWEVLWSALASCGLVLFSQLAVAMVPRLV----FIAAIVLGRL----------W- 56

Query: 68  RRLLGVCASAPAFVFFNILFIWGFYIAVVRQAVSSLIGGLFNIEVAMIIIGLCSIMSKDP 127
           RR +GV ASAP FV FNIL +WG Y+ V+R+  SSL+  L N E A+++ G   I+S DP
Sbjct: 57  RRFIGVAASAPLFVLFNILLLWGVYVFVIRRETSSLLDMLINAECALLLWGFYRILSGDP 116

Query: 128 GLITNEFPHLDKLVEGSELGVDPDNENSLSRKRVRYCKICKAHVEGFDHHCPAFGNCI-- 185
           G++  +  +L++      +     +E      RVR C  CKA++ G+DHHCPAFG CI  
Sbjct: 117 GIVACDSSYLEEAGCKDFVEAIYSSEKLPMLSRVRQCTWCKANIRGYDHHCPAFGTCIGQ 176

Query: 186 ----------------EASYVACSAQFVGKSQNFDKSQSENDWVVNLATSTMLFSILQLL 229
                           E++Y  CS +++ +  +    +SEN   +N+  ST LFSILQ+L
Sbjct: 177 KNHRLFMALLTGFVVAESTYTMCSTKYITRCISSGTIRSENPVSLNIVISTTLFSILQVL 236

Query: 230 WQAVFFMWHIYCVCFNVRTDEWVNWKKYPEFQVIESEPGESFTRMRFTNPYDKGFLQNVK 289
           WQ VF MWHIYC+CFN++TDEW+NWKKYPEFQ+ E    +S   ++F NPYDKG L N++
Sbjct: 237 WQIVFLMWHIYCICFNIKTDEWINWKKYPEFQMKEQPRSDS--EVKFVNPYDKGMLCNIR 294

Query: 290 DFL 292
           +FL
Sbjct: 295 EFL 297

Source: Zea mays

Species: Zea mays

Genus: Zea

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224106499|ref|XP_002314187.1| predicted protein [Populus trichocarpa] gi|222850595|gb|EEE88142.1| predicted protein [Populus trichocarpa]

 Score =  233 bits (595), Expect = 6e-59,   Method: Compositional matrix adjust.
 Identities = 110/194 (56%), Positives = 136/194 (70%), Gaps = 19/194 (9%)

Query: 120 CSIMSKDPGLITNEFPHLDKLVEGSELGVDPDNENSLSRKRVRYCKICKAHVEGFDHHCP 179
           C I+S DPGL+T+     +KL+E    GV+  NE S   KRVRYCK CKA+++GFDHHCP
Sbjct: 56  CIILSSDPGLVTHGSSDANKLIETKAFGVEAHNEGSALLKRVRYCKSCKAYIKGFDHHCP 115

Query: 180 AFGNCI------------------EASYVACSAQFVGKSQNFDKSQSENDWVVNLATSTM 221
           AFGNCI                  EASY+ CS+QF   SQ    +  E D   +L  STM
Sbjct: 116 AFGNCIGQNNYVLFMILLAGFLTTEASYIVCSSQFSRGSQILGGTWFETDLAGSLVVSTM 175

Query: 222 LFSILQLLWQAVFFMWHIYCVCFNVRTDEWVNWKKYPEFQ-VIESEPGESFTRMRFTNPY 280
           LFS+LQ++WQ VFF WH+YC+CFN+RTDEW+NWKKYPEFQ VI+S+PGESFTR+ F NPY
Sbjct: 176 LFSLLQVIWQGVFFTWHLYCICFNIRTDEWINWKKYPEFQFVIQSQPGESFTRVMFKNPY 235

Query: 281 DKGFLQNVKDFLSL 294
           D G+LQNVK+FLS+
Sbjct: 236 DNGYLQNVKEFLSV 249

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	296
FB|FBgn0259824	637	Hip14 "Huntingtin-interacting	0.456	0.211	0.300	2e-10
MGI|MGI:2445110	632	Zdhhc17 "zinc finger, DHHC dom	0.209	0.098	0.397	1.9e-07
UNIPROTKB|J9P6L2	494	ZDHHC17 "Uncharacterized prote	0.209	0.125	0.397	2e-07
UNIPROTKB|F1N9E7	601	ZDHHC17 "Uncharacterized prote	0.209	0.103	0.397	2.6e-07
UNIPROTKB|F1PRB8	604	ZDHHC17 "Uncharacterized prote	0.209	0.102	0.397	3.4e-07
UNIPROTKB|E9PTT0	622	Zdhhc17 "Protein Zdhhc17" [Rat	0.209	0.099	0.397	3.6e-07
UNIPROTKB|Q8IUH5	632	ZDHHC17 "Palmitoyltransferase	0.209	0.098	0.397	3.8e-07
UNIPROTKB|E1BJK1	634	ZDHHC17 "Uncharacterized prote	0.209	0.097	0.397	3.8e-07
RGD|1595790	622	Zdhhc17 "zinc finger, DHHC-typ	0.202	0.096	0.393	6e-07
FB|FBgn0029137	585	Patsas "Patsas" [Drosophila me	0.699	0.353	0.240	1.1e-06

FB|FBgn0259824 Hip14 "Huntingtin-interacting protein 14" [Drosophila melanogaster (taxid:7227)]

 Score = 118 (46.6 bits), Expect = 2.0e-10, Sum P(2) = 2.0e-10
 Identities = 46/153 (30%), Positives = 70/153 (45%)

Query:    46 FIVQFALSGXXXXXXQTLCGWCRRLLGVCASAPAFVFFNILFIWGFYIA---VVRQAVSS 102
             +I++F L G       T+ G       + A  P  V+      W FY+     +  AVS 
Sbjct:   320 YIIKFFLLGCLYSIFHTI-GKALFDEHLMALLPLSVYLATK-AW-FYVTWLMYIDDAVSF 376

Query:   103 LIGGLFNIEVAMIIIGLCSIMS--KDPGLI--TNE--FPHLDKLVEGSELGVDPDN--EN 154
                  F I  + +++ +C + S   DPG+I  T E  F  + +L E   +G +P +    
Sbjct:   377 TATVCFLI--SSLLLWVCFLKSWKGDPGIIRPTREQRFKTIIELSERGGIGFEPASFCSG 434

Query:   155 SLSRKRVR--YCKICKAHVEGFDHHCPAFGNCI 185
              L R+ +R  +C +C   V  FDHHCP  GNCI
Sbjct:   435 CLVRRPIRSKHCSVCDRCVARFDHHCPWVGNCI 467

GO:0008270 "zinc ion binding" evidence=IEA

GO:0016079 "synaptic vesicle exocytosis" evidence=IMP

GO:0007268 "synaptic transmission" evidence=IMP

GO:0045202 "synapse" evidence=IDA

GO:0008021 "synaptic vesicle" evidence=IDA

GO:0005794 "Golgi apparatus" evidence=IDA

GO:0018345 "protein palmitoylation" evidence=ISS

GO:0019706 "protein-cysteine S-palmitoleyltransferase activity" evidence=ISS

GO:0050714 "positive regulation of protein secretion" evidence=IMP

MGI|MGI:2445110 Zdhhc17 "zinc finger, DHHC domain containing 17" [Mus musculus (taxid:10090)]

 Score = 101 (40.6 bits), Expect = 1.9e-07, Sum P(2) = 1.9e-07
 Identities = 27/68 (39%), Positives = 35/68 (51%)

Query:   126 DPGLI-TNEFPHLDKLVEGSELG-VDPDN--ENSLSRKRVR--YCKICKAHVEGFDHHCP 179
             DPG+I   E      +VE +E G +D        L RK VR  +C +C   +  FDHHCP
Sbjct:   409 DPGIIKATEEQKKKTIVELAETGSLDLSIFCSTCLIRKPVRSKHCGVCNRCIAKFDHHCP 468

Query:   180 AFGNCIEA 187
               GNC+ A
Sbjct:   469 WVGNCVGA 476

GO:0000139 "Golgi membrane" evidence=ISO

GO:0004871 "signal transducer activity" evidence=ISO

GO:0005794 "Golgi apparatus" evidence=IEA

GO:0006810 "transport" evidence=IEA

GO:0006811 "ion transport" evidence=IEA

GO:0007165 "signal transduction" evidence=ISO

GO:0008270 "zinc ion binding" evidence=IEA

GO:0015095 "magnesium ion transmembrane transporter activity" evidence=ISO

GO:0015693 "magnesium ion transport" evidence=ISO

GO:0016020 "membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0016409 "palmitoyltransferase activity" evidence=IDA

GO:0016740 "transferase activity" evidence=IEA

GO:0016746 "transferase activity, transferring acyl groups" evidence=IEA

GO:0018345 "protein palmitoylation" evidence=IDA

GO:0019706 "protein-cysteine S-palmitoleyltransferase activity" evidence=ISO

GO:0030660 "Golgi-associated vesicle membrane" evidence=ISO

GO:0031410 "cytoplasmic vesicle" evidence=IEA

GO:0042953 "lipoprotein transport" evidence=ISO

GO:0043123 "positive regulation of I-kappaB kinase/NF-kappaB cascade" evidence=ISO

GO:0046872 "metal ion binding" evidence=IEA

UNIPROTKB|J9P6L2 ZDHHC17 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 101 (40.6 bits), Expect = 2.0e-07, Sum P(2) = 2.0e-07
 Identities = 27/68 (39%), Positives = 35/68 (51%)

Query:   126 DPGLI-TNEFPHLDKLVEGSELG-VDPDN--ENSLSRKRVR--YCKICKAHVEGFDHHCP 179
             DPG+I   E      +VE +E G +D        L RK VR  +C +C   +  FDHHCP
Sbjct:   271 DPGIIKATEEQKKKTIVELAETGSLDLSIFCSTCLIRKPVRSKHCGVCNRCIAKFDHHCP 330

Query:   180 AFGNCIEA 187
               GNC+ A
Sbjct:   331 WVGNCVGA 338

GO:0008270 "zinc ion binding" evidence=IEA

UNIPROTKB|F1N9E7 ZDHHC17 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 101 (40.6 bits), Expect = 2.6e-07, Sum P(2) = 2.6e-07
 Identities = 27/68 (39%), Positives = 35/68 (51%)

Query:   126 DPGLI-TNEFPHLDKLVEGSELG-VDPDN--ENSLSRKRVR--YCKICKAHVEGFDHHCP 179
             DPG+I   E      +VE +E G +D        L RK VR  +C +C   +  FDHHCP
Sbjct:   378 DPGIIKATEEQKKKTIVELAETGSLDLSIFCSTCLIRKPVRSKHCGVCNRCIAKFDHHCP 437

Query:   180 AFGNCIEA 187
               GNC+ A
Sbjct:   438 WVGNCVGA 445

GO:0008270 "zinc ion binding" evidence=IEA

GO:0004871 "signal transducer activity" evidence=IEA

GO:0015095 "magnesium ion transmembrane transporter activity" evidence=IEA

GO:0018345 "protein palmitoylation" evidence=IEA

GO:0019706 "protein-cysteine S-palmitoleyltransferase activity" evidence=IEA

GO:0030660 "Golgi-associated vesicle membrane" evidence=IEA

GO:0042953 "lipoprotein transport" evidence=IEA

GO:0043123 "positive regulation of I-kappaB kinase/NF-kappaB cascade" evidence=IEA

UNIPROTKB|F1PRB8 ZDHHC17 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 101 (40.6 bits), Expect = 3.4e-07, Sum P(2) = 3.4e-07
 Identities = 27/68 (39%), Positives = 35/68 (51%)

Query:   126 DPGLI-TNEFPHLDKLVEGSELG-VDPDN--ENSLSRKRVR--YCKICKAHVEGFDHHCP 179
             DPG+I   E      +VE +E G +D        L RK VR  +C +C   +  FDHHCP
Sbjct:   381 DPGIIKATEEQKKKTIVELAETGSLDLSIFCSTCLIRKPVRSKHCGVCNRCIAKFDHHCP 440

Query:   180 AFGNCIEA 187
               GNC+ A
Sbjct:   441 WVGNCVGA 448

GO:0043123 "positive regulation of I-kappaB kinase/NF-kappaB cascade" evidence=IEA

GO:0042953 "lipoprotein transport" evidence=IEA

GO:0030660 "Golgi-associated vesicle membrane" evidence=IEA

GO:0019706 "protein-cysteine S-palmitoleyltransferase activity" evidence=IEA

GO:0018345 "protein palmitoylation" evidence=IEA

GO:0015095 "magnesium ion transmembrane transporter activity" evidence=IEA

GO:0004871 "signal transducer activity" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

UNIPROTKB|E9PTT0 Zdhhc17 "Protein Zdhhc17" [Rattus norvegicus (taxid:10116)]

 Score = 101 (40.6 bits), Expect = 3.6e-07, Sum P(2) = 3.6e-07
 Identities = 27/68 (39%), Positives = 35/68 (51%)

Query:   126 DPGLI-TNEFPHLDKLVEGSELG-VDPDN--ENSLSRKRVR--YCKICKAHVEGFDHHCP 179
             DPG+I   E      +VE +E G +D        L RK VR  +C +C   +  FDHHCP
Sbjct:   399 DPGIIKATEEQKKKTIVELAETGSLDLSIFCSTCLIRKPVRSKHCGVCNRCIAKFDHHCP 458

Query:   180 AFGNCIEA 187
               GNC+ A
Sbjct:   459 WVGNCVGA 466

GO:0004871 "signal transducer activity" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0015095 "magnesium ion transmembrane transporter activity" evidence=IEA

GO:0018345 "protein palmitoylation" evidence=IEA

GO:0019706 "protein-cysteine S-palmitoleyltransferase activity" evidence=IEA

GO:0030660 "Golgi-associated vesicle membrane" evidence=IEA

GO:0042953 "lipoprotein transport" evidence=IEA

GO:0043123 "positive regulation of I-kappaB kinase/NF-kappaB cascade" evidence=IEA

UNIPROTKB|Q8IUH5 ZDHHC17 "Palmitoyltransferase ZDHHC17" [Homo sapiens (taxid:9606)]

 Score = 101 (40.6 bits), Expect = 3.8e-07, Sum P(2) = 3.8e-07
 Identities = 27/68 (39%), Positives = 35/68 (51%)

Query:   126 DPGLI-TNEFPHLDKLVEGSELG-VDPDN--ENSLSRKRVR--YCKICKAHVEGFDHHCP 179
             DPG+I   E      +VE +E G +D        L RK VR  +C +C   +  FDHHCP
Sbjct:   409 DPGIIKATEEQKKKTIVELAETGSLDLSIFCSTCLIRKPVRSKHCGVCNRCIAKFDHHCP 468

Query:   180 AFGNCIEA 187
               GNC+ A
Sbjct:   469 WVGNCVGA 476

GO:0008270 "zinc ion binding" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0018345 "protein palmitoylation" evidence=IEA

GO:0019706 "protein-cysteine S-palmitoleyltransferase activity" evidence=IDA

GO:0042953 "lipoprotein transport" evidence=IDA

GO:0004871 "signal transducer activity" evidence=IMP

GO:0043123 "positive regulation of I-kappaB kinase/NF-kappaB cascade" evidence=IMP

GO:0015095 "magnesium ion transmembrane transporter activity" evidence=IDA

GO:0030660 "Golgi-associated vesicle membrane" evidence=IDA

GO:0000139 "Golgi membrane" evidence=IDA

GO:0005515 "protein binding" evidence=IPI

GO:0007165 "signal transduction" evidence=IMP

GO:0015693 "magnesium ion transport" evidence=IDA

GO:0005737 "cytoplasm" evidence=IDA

GO:0005794 "Golgi apparatus" evidence=IDA

GO:0043231 "intracellular membrane-bounded organelle" evidence=IDA

UNIPROTKB|E1BJK1 ZDHHC17 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 101 (40.6 bits), Expect = 3.8e-07, Sum P(2) = 3.8e-07
 Identities = 27/68 (39%), Positives = 35/68 (51%)

Query:   126 DPGLI-TNEFPHLDKLVEGSELG-VDPDN--ENSLSRKRVR--YCKICKAHVEGFDHHCP 179
             DPG+I   E      +VE +E G +D        L RK VR  +C +C   +  FDHHCP
Sbjct:   411 DPGIIKATEEQKKKTIVELAETGSLDLSIFCSTCLIRKPVRSKHCGVCNRCIAKFDHHCP 470

Query:   180 AFGNCIEA 187
               GNC+ A
Sbjct:   471 WVGNCVGA 478

GO:0043123 "positive regulation of I-kappaB kinase/NF-kappaB cascade" evidence=IEA

GO:0042953 "lipoprotein transport" evidence=IEA

GO:0030660 "Golgi-associated vesicle membrane" evidence=IEA

GO:0019706 "protein-cysteine S-palmitoleyltransferase activity" evidence=IEA

GO:0018345 "protein palmitoylation" evidence=IEA

GO:0015095 "magnesium ion transmembrane transporter activity" evidence=IEA

GO:0004871 "signal transducer activity" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

RGD|1595790 Zdhhc17 "zinc finger, DHHC-type containing 17" [Rattus norvegicus (taxid:10116)]

 Score = 99 (39.9 bits), Expect = 6.0e-07, Sum P(2) = 6.0e-07
 Identities = 26/66 (39%), Positives = 34/66 (51%)

Query:   126 DPGLI-TNEFPHLDKLVEGSELG-VDPDN--ENSLSRKRVR--YCKICKAHVEGFDHHCP 179
             DPG+I   E      +VE +E G +D        L RK VR  +C +C   +  FDHHCP
Sbjct:   399 DPGIIKATEEQKKKTIVELAETGSLDLSIFCSTCLIRKPVRSKHCGVCNRCIAKFDHHCP 458

Query:   180 AFGNCI 185
               GNC+
Sbjct:   459 WVGNCV 464

GO:0000139 "Golgi membrane" evidence=ISO

GO:0004871 "signal transducer activity" evidence=ISO

GO:0005737 "cytoplasm" evidence=ISO

GO:0005794 "Golgi apparatus" evidence=ISO

GO:0007165 "signal transduction" evidence=ISO

GO:0015095 "magnesium ion transmembrane transporter activity" evidence=ISO

GO:0015693 "magnesium ion transport" evidence=ISO

GO:0016409 "palmitoyltransferase activity" evidence=ISO

GO:0018345 "protein palmitoylation" evidence=ISO

GO:0019706 "protein-cysteine S-palmitoleyltransferase activity" evidence=ISO

GO:0030660 "Golgi-associated vesicle membrane" evidence=ISO

GO:0042953 "lipoprotein transport" evidence=ISO

GO:0043123 "positive regulation of I-kappaB kinase/NF-kappaB cascade" evidence=ISO

GO:0043231 "intracellular membrane-bounded organelle" evidence=ISO

FB|FBgn0029137 Patsas "Patsas" [Drosophila melanogaster (taxid:7227)]

 Score = 140 (54.3 bits), Expect = 1.1e-06, P = 1.1e-06
 Identities = 58/241 (24%), Positives = 103/241 (42%)

Query:    75 ASAPAFVFFNILFIWGFYIAVVRQA--VSSLIGG---LFNIEVAMIIIGLCSIMSKDPGL 129
             +  P F+F   + +WG+ + ++R      +++      F    A++ I       +DPG 
Sbjct:   336 SKGPLFLFLFSVLLWGYPMYMIRAIPITWNILRRSHYCFIYWNAVMWISWAIANRRDPGY 395

Query:   130 IT----------NEFPHLDKLVEGSELGVDPDNE-NSLSRKRVRYCKICKAHVEGFDHHC 178
             I            + P+ DKL + + +     +    L   R ++C++C   V  FDHHC
Sbjct:   396 IPLSSDAYYRAIKQIPYFDKLKKRNVMLTRLCHSCRCLRPLRAKHCRVCNRCVSYFDHHC 455

Query:   179 PAFGNCIEASYVACSAQFV-GKSQNFDKSQSENDWVVNLATSTMLFSILQLLWQAVF--F 235
             P   NC+          FV   + N   +     + V +   TML+ +L L+   VF   
Sbjct:   456 PFIYNCVGLRNRMWFFLFVLSVAVNCSFTIYFACYCVMIEGFTMLY-VLGLIEAVVFCGL 514

Query:   236 MWHIYCV-----CFNVRTDEWVNWKKYPEFQVIESEPGESFTRMRFTNPYDKGFLQNVKD 290
              W + C      C N+ T+E  N+K+YP    +  + G      R+ NP+ +G + N+ +
Sbjct:   515 GWILTCTSILHACMNLTTNEMFNYKRYP---YLRDKRG------RYQNPFSRGPILNLLE 565

Query:   291 F 291
             F
Sbjct:   566 F 566

GO:0008270 "zinc ion binding" evidence=IEA

GO:0005794 "Golgi apparatus" evidence=IDA

GO:0019706 "protein-cysteine S-palmitoleyltransferase activity" evidence=ISS

GO:0018345 "protein palmitoylation" evidence=ISS

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: 4332408 DHHC zinc finger domain containing protein, expressed (315 aa) (Oryza sativa Japonica)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	296
pfam01529	167	pfam01529, zf-DHHC, DHHC palmitoyltransferase	2e-09
COG5273	309	COG5273, COG5273, Uncharacterized protein containi	6e-08

>gnl|CDD|216554 pfam01529, zf-DHHC, DHHC palmitoyltransferase

 Score = 55.2 bits (133), Expect = 2e-09
 Identities = 31/164 (18%), Positives = 58/164 (35%), Gaps = 27/164 (16%)

Query: 119 LCSIMSKDPGLITNEFPHLDKLVEGSELGVDPDNENSLS-------RK--RVRYCKICKA 169
               +  DPG +       ++  +  E   + D E+ L         K  R  +C++C  
Sbjct: 4   YFKTIFTDPGYVPKNPTEKEQEKQPDEESEEGDEEDELKFCSTCNIIKPPRSHHCRVCNR 63

Query: 170 HVEGFDHHCPAFGNCI------------------EASYVACSAQFVGKSQNFDKSQSEND 211
            V  FDHHCP   NCI                      +  S  ++       +      
Sbjct: 64  CVLRFDHHCPWLNNCIGRRNHKYFLLFLLYLTLYLILLLVLSFYYLVYLIRNIELFFFLI 123

Query: 212 WVVNLATSTMLFSILQLLWQAVFFMWHIYCVCFNVRTDEWVNWK 255
             +  +   ++ S+  LL+ +    +H+Y +  N+ T E++  K
Sbjct: 124 LSLFSSIILLVLSLFFLLFLSFLLFFHLYLILKNITTYEYIKKK 167

This family includes the well known DHHC zinc binding domain as well as three of the four conserved transmembrane regions found in this family of palmitoyltransferase enzymes. Length = 167

>gnl|CDD|227598 COG5273, COG5273, Uncharacterized protein containing DHHC-type Zn finger [General function prediction only]

 Score = 52.8 bits (127), Expect = 6e-08
 Identities = 33/159 (20%), Positives = 52/159 (32%), Gaps = 27/159 (16%)

Query: 160 RVRYCKICKAHVEGFDHHCPAFGNCI-----------------EASYVACSAQF-VGKSQ 201
           R  +C IC   V  FDHHCP   NC+                  A  V  S  + +    
Sbjct: 122 RSHHCSICNRCVLKFDHHCPWINNCVGFRNYRFFYQFLLYTILVALVVLLSTAYYIAGIF 181

Query: 202 NFDKSQSENDWVVNLATSTMLFSILQLLWQAVFFMWHIYCVCFNVRTDE--WVNW-KKYP 258
           +     S     +    S +      +    +  ++ IY +  N+ T E   ++      
Sbjct: 182 SIRHDTSLAICFLIFGCSLLGVVFFIIT--TLLLLFLIYLILNNLTTIEFIQISRGGSTL 239

Query: 259 EFQVIESEPGESFTRMRFT----NPYDKGFLQNVKDFLS 293
           EF  +  E    FT +  +     P D G  QN+     
Sbjct: 240 EFFPLCRESNLPFTNIFDSSEGALPLDLGIGQNLSTIKG 278

Length = 309

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	296
KOG1314	414	consensus DHHC-type Zn-finger protein [General fun	100.0
KOG1315	307	consensus Predicted DHHC-type Zn-finger protein [G	100.0
KOG0509	600	consensus Ankyrin repeat and DHHC-type Zn-finger d	100.0
KOG1311	299	consensus DHHC-type Zn-finger proteins [General fu	100.0
PF01529	174	zf-DHHC: DHHC palmitoyltransferase; InterPro: IPR0	99.98
COG5273	309	Uncharacterized protein containing DHHC-type Zn fi	99.96
KOG1313	309	consensus DHHC-type Zn-finger proteins [General fu	99.96
KOG1312	341	consensus DHHC-type Zn-finger proteins [General fu	99.91
PF13240	23	zinc_ribbon_2: zinc-ribbon domain	88.63
KOG1311	299	consensus DHHC-type Zn-finger proteins [General fu	86.3
PF13248	26	zf-ribbon_3: zinc-ribbon domain	85.17
PRK04136	48	rpl40e 50S ribosomal protein L40e; Provisional	82.45
PTZ00303	1374	phosphatidylinositol kinase; Provisional	80.69
PF12773	50	DZR: Double zinc ribbon	80.6

>KOG1314 consensus DHHC-type Zn-finger protein [General function prediction only]

Probab=100.00  E-value=6.6e-36  Score=269.28  Aligned_cols=187  Identities=17%  Similarity=0.143  Sum_probs=130.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhcCCCccCCCCCCccccccCCCCCCCCCCCCCCCCCCCccccccCcccccccCcccccC
Q 022522          103 LIGGLFNIEVAMIIIGLCSIMSKDPGLITNEFPHLDKLVEGSELGVDPDNENSLSRKRVRYCKICKAHVEGFDHHCPAFG  182 (296)
Q Consensus       103 ~~~~~f~~~~~~~~~~~~~~~~~dPG~vp~~~~~~~~~~~~~~~~~~C~~C~~~kP~Rs~HC~~C~~CV~r~DHHCpWi~  182 (296)
                      .-.+.|.+...+.+++|+.++++.||++|....++..  +++.-.+||..|+.+|++||||||.|||||.+|||||||+|
T Consensus        49 ~n~i~f~~~~~m~~~ny~~A~~~gPG~vp~~wkPe~~--~D~~~lqfCk~CqgYKapRSHHCrkCnrCvmkMDHHCPWin  126 (414)
T KOG1314|consen   49 PNQITFLLWTSMILYNYFNAIFTGPGFVPLGWKPENP--KDEMFLQFCKKCQGYKAPRSHHCRKCNRCVMKMDHHCPWIN  126 (414)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCCCC--hhHHHHHHHhhccCcCCCccccchHHHHHHHhhccCCcchh
Confidence            3457788888999999999999999999999875432  22222489999999999999999999999999999999999


Q ss_pred             ceecch---hHHH-HHHHHhhHhhc-----------------ccccc-C---Cch---HHHHHHHHHHHHHHHHHHHHHH
Q 022522          183 NCIEAS---YVAC-SAQFVGKSQNF-----------------DKSQS-E---NDW---VVNLATSTMLFSILQLLWQAVF  234 (296)
Q Consensus       183 nCIG~~---y~~~-~~~~~~~~~~~-----------------~~~~~-~---~~~---~~~~~~~~~~~~~~~~i~v~~L  234 (296)
                      ||||..   ||.- ++..+.+++.-                 ..... .   ..+   .....+..+-+++...+.+++|
T Consensus       127 nCVG~aNh~~F~~FLlf~ivG~ih~tiI~~~~~~~~Iy~~W~~~~g~~hlp~v~ft~~~li~~vfslgla~gv~la~t~L  206 (414)
T KOG1314|consen  127 NCVGWANHAYFLRFLLFSIVGCIHGTIILVCAQYRGIYFRWYIKYGLRHLPIVFFTLSSLIALVFSLGLAIGVVLALTML  206 (414)
T ss_pred             hcccccccHHHHHHHHHHHHhcccceeeehhHHHHHHHHHHHhhcccccCceeeccHHHHHHHHHHhHHHHHHHHHHHHH
Confidence            999996   3331 11111111100                 00000 0   011   1112233344555667788889


Q ss_pred             HHHHHHHHHhChhhHHhhhccCCCccccccCCCCCcccCCCccCCCCHhHHHHHHHhcCCC
Q 022522          235 FMWHIYCVCFNVRTDEWVNWKKYPEFQVIESEPGESFTRMRFTNPYDKGFLQNVKDFLSLR  295 (296)
Q Consensus       235 l~~q~~lI~~n~TT~E~~~~~r~~~~~~~~~~~~~~~~~~~~~npyd~G~~~Nl~effg~~  295 (296)
                      +..|+.+|.+|+|.+|.+.-+|..+.+..-    ..+..++...|||.|+..|++|+|..+
T Consensus       207 f~~qlk~Il~nrt~IE~wi~~Ka~~rr~~~----~~d~~~~f~ypydlgWr~n~r~vf~~~  263 (414)
T KOG1314|consen  207 FFIQLKQILNNRTGIESWIVEKAMDRREYY----FNDDEGEFTYPYDLGWRINLREVFFQN  263 (414)
T ss_pred             HHHHHHHHHcCCcchHHHHHHHHHHHHHhh----ccCCCCceeeeccccccccHHHHhhhc
Confidence            999999999999999998744433333111    123345788999999777999999765

>KOG1315 consensus Predicted DHHC-type Zn-finger protein [General function prediction only]

Probab=100.00  E-value=6e-36  Score=272.39  Aligned_cols=199  Identities=17%  Similarity=0.261  Sum_probs=137.9

Q ss_pred             HHHHHHHHHhhhhheec--------chhhHHHHHHHHHHHHHHHHHHHHhhcCCCccCCCCCCcccc------cc-----
Q 022522           82 FFNILFIWGFYIAVVRQ--------AVSSLIGGLFNIEVAMIIIGLCSIMSKDPGLITNEFPHLDKL------VE-----  142 (296)
Q Consensus        82 ~f~~~~~w~~~~~~~~~--------~~~~~~~~~f~~~~~~~~~~~~~~~~~dPG~vp~~~~~~~~~------~~-----  142 (296)
                      ++.+.+.|.+|+++...        .+.....+.+..+.++..|+|++++++|||.+|.......+.      +.     
T Consensus        18 ~i~~~~~~~yy~~v~~~c~~~i~~~~~~~~~ll~~~~ll~m~~~sy~~~vf~~pg~vp~~~~~~~~~~~~~~~~~~~~~~   97 (307)
T KOG1315|consen   18 IILLVIGWTYYVYVAVLCILSISLTIPSVLLLLLFHLLLIMFLWSYFRTVFTDPGRVPDSYRPSVEDEDSLENGSDNERD   97 (307)
T ss_pred             eeeeeEEEEEEEeehhhhHHHHhhhhHHHHHHHHHHHHHHHHHHHHHheeEecCCCCccccCCCcCccccccccCccccc
Confidence            44566778888887652        123567788999999999999999999999999765422110      00     


Q ss_pred             -------CCCCCCCCCCCCCCCCCCCccccccCcccccccCcccccCceecch---hHH--HHHHHH-------hhHh--
Q 022522          143 -------GSELGVDPDNENSLSRKRVRYCKICKAHVEGFDHHCPAFGNCIEAS---YVA--CSAQFV-------GKSQ--  201 (296)
Q Consensus       143 -------~~~~~~~C~~C~~~kP~Rs~HC~~C~~CV~r~DHHCpWi~nCIG~~---y~~--~~~~~~-------~~~~--  201 (296)
                             .+...++|.+|+.+||+|||||+.|+|||+||||||||+|||||++   ||.  +.+.++       ....  
T Consensus        98 ~~~~~~~~~g~~R~C~kC~~iKPdRaHHCsvC~rCvLKmDHHCpWi~nCVgf~NyKfF~lfl~y~~l~~~~~lv~~~~~~  177 (307)
T KOG1315|consen   98 LPGYTRTSDGAVRYCDKCKCIKPDRAHHCSVCNRCVLKMDHHCPWINNCVGFRNYKFFLLFLFYTNLYSIYVLVTTLIGF  177 (307)
T ss_pred             ceeeEecCCCCceeecccccccCCccccchhhhhhhhccccCCcceeceecccchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence                   1123599999999999999999999999999999999999999996   232  111111       1111  


Q ss_pred             --hccccccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChhhHHhhhccCCCccccccCCCCCcccCCCccCC
Q 022522          202 --NFDKSQSENDWVVNLATSTMLFSILQLLWQAVFFMWHIYCVCFNVRTDEWVNWKKYPEFQVIESEPGESFTRMRFTNP  279 (296)
Q Consensus       202 --~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~~Ll~~q~~lI~~n~TT~E~~~~~r~~~~~~~~~~~~~~~~~~~~~np  279 (296)
                        ++.......+.........++.+...++-+..++++|+++|++|+||+|..+.+.+.             .+....|.
T Consensus       178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~f~i~l~~~l~~h~~Li~~N~TTiE~~~~~~~~-------------~~~~~~~~  244 (307)
T KOG1315|consen  178 TKYFQGGAGPSSLLLFFIVFLFLVAIAFSISLSGLLCFHTYLILKNKTTIEAYKSPVFR-------------SGLHNKNG  244 (307)
T ss_pred             HHHHhccccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchhHhhhcccccc-------------ccccccCC
Confidence              111111112222233344566666677777779999999999999999998654222             12235677


Q ss_pred             CCHhHHHHHHHhcCCC
Q 022522          280 YDKGFLQNVKDFLSLR  295 (296)
Q Consensus       280 yd~G~~~Nl~effg~~  295 (296)
                      ||.  ..|++|+||.+
T Consensus       245 ~~~--~~n~~~vfg~~  258 (307)
T KOG1315|consen  245 FNL--YVNFREVFGSN  258 (307)
T ss_pred             cce--eecHHHHhCCC
Confidence            777  78999999976

>KOG0509 consensus Ankyrin repeat and DHHC-type Zn-finger domain containing proteins [General function prediction only]

Probab=100.00  E-value=3.3e-34  Score=275.95  Aligned_cols=263  Identities=20%  Similarity=0.269  Sum_probs=172.1

Q ss_pred             hHhhhHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHhhhhhhcc-------cccccchHHH-HHHHHHH
Q 022522           17 ICRCIISCILVLLTQLTLSLVPRFFAASPFIVQFALSGLVLLLVQTLCGWCRRLL-------GVCASAPAFV-FFNILFI   88 (296)
Q Consensus        17 ~~~~~~~~~~f~~p~~~l~~~~~~~~~~~~~~~lpl~~~~~~~~~~~~~~~~~~~-------~~~~~~p~~~-~f~~~~~   88 (296)
                      +++..++.+.|.    .++.++.+.+..+.++.+-.+ ...+....+.+++....       +....+|+.. ++.++.+
T Consensus       278 ~~~~~~~~~~f~----~~~~~~~~~~~~~g~i~~~~~-~w~i~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f  352 (600)
T KOG0509|consen  278 LGSKLAALIFFI----FLGLFYFISSWLPGVIFLINS-LWLIKGLALGKLVLTCLCATRKIVGFLLRPPLLSGFFLSTLF  352 (600)
T ss_pred             hhhHHHHHHHHH----HHHHHHHHHhhccchhhhhhh-HHHHhhhhhhhhhhheeccchhhccccccchhHHHHHHHHHH
Confidence            344445555554    677777888888877766665 33332334444444321       2455667776 8889999


Q ss_pred             HHhhhhheecch--hhHHHHHHHHHHHHHHHHHHHHhhcCCCccCCCCCCcc-------ccccCCCCCCCCCCCCCCCCC
Q 022522           89 WGFYIAVVRQAV--SSLIGGLFNIEVAMIIIGLCSIMSKDPGLITNEFPHLD-------KLVEGSELGVDPDNENSLSRK  159 (296)
Q Consensus        89 w~~~~~~~~~~~--~~~~~~~f~~~~~~~~~~~~~~~~~dPG~vp~~~~~~~-------~~~~~~~~~~~C~~C~~~kP~  159 (296)
                      |.++.|.....+  .+.....+.+..+..++.++++..+|||++|.+++...       |.++++...+||.+|.++||.
T Consensus       353 w~~~~w~~~i~~~~~~~~~~~~i~~~l~~~~~f~~~~rsDPg~i~~~~~~~~~tIs~l~d~gkf~~en~FC~~clirKp~  432 (600)
T KOG0509|consen  353 WFYYFWFSKITPYTLFDFHYCFIISVLAYFITFGLFLRSDPGFIPTSTEVGRETISQLIDFGKFDLENRFCLTCLIRKPL  432 (600)
T ss_pred             HHHHhhheeccchhhhhhHHHHHHHHHHHHHHHHHHhccCCCCCCCchhhHHHHHHHhhccccccccccceeeeeeecCC
Confidence            999999874222  34456666667777778888888899999999987542       334455422699999999999


Q ss_pred             CCccccccCcccccccCcccccCceecch---hHH---H-----HHHHHhhHh-hccccccCCchHHHHHHHH-------
Q 022522          160 RVRYCKICKAHVEGFDHHCPAFGNCIEAS---YVA---C-----SAQFVGKSQ-NFDKSQSENDWVVNLATST-------  220 (296)
Q Consensus       160 Rs~HC~~C~~CV~r~DHHCpWi~nCIG~~---y~~---~-----~~~~~~~~~-~~~~~~~~~~~~~~~~~~~-------  220 (296)
                      |||||+.|||||+||||||||++||||.+   +|+   .     ...++.++. ++.............++.+       
T Consensus       433 rSkhc~vcnrcVarfDHhCPwi~ncVG~kNh~~F~~Fl~~l~~~~~~~l~~~~~y~~~~~~~~~~~~~~l~~~~~~~~~~  512 (600)
T KOG0509|consen  433 RSKHCSVCNRCVARFDHHCPWIGNCVGLKNHRLFVFFLLTLLTVIVFYLYLCLYYIMNLENASTIYVGFLIAVQAFRIPK  512 (600)
T ss_pred             ccchhhhhHHHHhccccCCCccccccCccchHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHhCCc
Confidence            99999999999999999999999999996   222   1     112222332 2222211110001111111       


Q ss_pred             ------HHHHHHHHHHHHHHHHHHHH-HHHhChhhHHhhhccCCCccccccCCCCCcccCCCccCCCCHhHHHHHHHhcC
Q 022522          221 ------MLFSILQLLWQAVFFMWHIY-CVCFNVRTDEWVNWKKYPEFQVIESEPGESFTRMRFTNPYDKGFLQNVKDFLS  293 (296)
Q Consensus       221 ------~~~~~~~~i~v~~Ll~~q~~-lI~~n~TT~E~~~~~r~~~~~~~~~~~~~~~~~~~~~npyd~G~~~Nl~effg  293 (296)
                            +...-+...|.......|-+ .++.++||+|+++.+|+++++.+.         ...++|++.|..+|+.+|+-
T Consensus       513 ~~~~~~~~n~~~~~t~~~~~~~~~~~~~~c~~~tt~e~~n~~r~~~~~~~~---------~~~~~~~s~g~~~Nl~df~~  583 (600)
T KOG0509|consen  513 PVTGNLLGNEDLNPTWGSTSTKCQHYNCACLHLTTNEQINVKRYEHLGIKR---------GPTRSPFSPGPIRNLVDFFL  583 (600)
T ss_pred             cceeeeeeccccccccccccccccccceeeecccHHHHHHHHHhhcccccc---------CcCCCCCCchhhhcchheee
Confidence                  11111112355444444444 469999999999999999988553         34789999999999999974

>KOG1311 consensus DHHC-type Zn-finger proteins [General function prediction only]

Probab=100.00  E-value=2.5e-33  Score=258.59  Aligned_cols=156  Identities=22%  Similarity=0.272  Sum_probs=105.1

Q ss_pred             cCCCccCCCCCCcccc---c---c------CCCCCCCCCCCCCCCCCCCccccccCcccccccCcccccCceecch---h
Q 022522          125 KDPGLITNEFPHLDKL---V---E------GSELGVDPDNENSLSRKRVRYCKICKAHVEGFDHHCPAFGNCIEAS---Y  189 (296)
Q Consensus       125 ~dPG~vp~~~~~~~~~---~---~------~~~~~~~C~~C~~~kP~Rs~HC~~C~~CV~r~DHHCpWi~nCIG~~---y  189 (296)
                      +|||.+|+..+...|.   .   +      .....++|.+|+..||+|||||+.||+||.||||||||+|||||.+   |
T Consensus        79 sdpg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~C~~~rPpRs~HCsvC~~CV~rfDHHC~WvnnCVG~rNyr~  158 (299)
T KOG1311|consen   79 SDPGIVPRADDEQIEDPERAPLYKNVDVNGIQVEWKYCDTCQLYRPPRSSHCSVCNNCVLRFDHHCPWLNNCIGERNYRY  158 (299)
T ss_pred             CCCceecCcccCCCCCccccccCCCcccCCcccceEEcCcCcccCCCCcccchhhcccccccCCCCCCccceECCCchHH
Confidence            4999999963211111   0   0      0112589999999999999999999999999999999999999997   3


Q ss_pred             HHHHHHHH---------hhHhhccc----c---cc--CCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChhhHHh
Q 022522          190 VACSAQFV---------GKSQNFDK----S---QS--ENDWVVNLATSTMLFSILQLLWQAVFFMWHIYCVCFNVRTDEW  251 (296)
Q Consensus       190 ~~~~~~~~---------~~~~~~~~----~---~~--~~~~~~~~~~~~~~~~~~~~i~v~~Ll~~q~~lI~~n~TT~E~  251 (296)
                      |.....+.         .....+..    .   ..  .........+.+.+++++....++.|+.+|+++|.+|+||+|+
T Consensus       159 F~~f~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~fh~~li~~~~Tt~e~  238 (299)
T KOG1311|consen  159 FVLFLFYLALGVLLALAFLFYELLQRADNLKVNLTPVLIPAGTFLSALLGLLSALFLAFTSALLCFHIYLIKSGSTTYES  238 (299)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccccccchhHHHHHHHHHHHHHHHHHHHHHHHhheeeEecCcchhhh
Confidence            33111111         11111111    0   11  1111112233445667777777888999999999999999999


Q ss_pred             hhccCCCccccccCCCCCcccCCCccCCCCHhHHHHHHHhcCCCC
Q 022522          252 VNWKKYPEFQVIESEPGESFTRMRFTNPYDKGFLQNVKDFLSLRR  296 (296)
Q Consensus       252 ~~~~r~~~~~~~~~~~~~~~~~~~~~npyd~G~~~Nl~effg~~r  296 (296)
                      ++.  +++              ....+|||+|.++|++++||.++
T Consensus       239 ~~~--~~~--------------~~~~~~~~~g~~~n~~~~~~~~~  267 (299)
T KOG1311|consen  239 IKS--LDF--------------VSRSNPYDLGLLKNLQEVFGGPL  267 (299)
T ss_pred             hhc--ccc--------------ccccCCCchhHHHHHHHHhCCCC
Confidence            864  110              01259999999999999999864

>PF01529 zf-DHHC: DHHC palmitoyltransferase; InterPro: IPR001594 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=99.98  E-value=6.2e-33  Score=236.09  Aligned_cols=139  Identities=19%  Similarity=0.349  Sum_probs=95.9

Q ss_pred             HHHHHHhhcCCCccCCCC-CC--------cc-------ccccCCCCCCCCCCCCCCCCCCCccccccCcccccccCcccc
Q 022522          117 IGLCSIMSKDPGLITNEF-PH--------LD-------KLVEGSELGVDPDNENSLSRKRVRYCKICKAHVEGFDHHCPA  180 (296)
Q Consensus       117 ~~~~~~~~~dPG~vp~~~-~~--------~~-------~~~~~~~~~~~C~~C~~~kP~Rs~HC~~C~~CV~r~DHHCpW  180 (296)
                      ++|+++..+|||++|+.. ++        ..       +..+.+...++|.+|+..||+|||||+.||+||.||||||||
T Consensus         2 ~~~~~~~~~dPG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~C~~~kp~Rs~HC~~C~~CV~~~DHHC~w   81 (174)
T PF01529_consen    2 WSYFLTIFIDPGYVPRSNPDEDQRQEEKEEEQNQSIDSPEDDENGELKYCSTCKIIKPPRSHHCRVCNRCVLRFDHHCPW   81 (174)
T ss_pred             EEehhhheECCcccCCccccccccccccccccchhhhhhccccCCCCEECcccCCcCCCcceeccccccccccccccchh
Confidence            568899999999999981 10        00       001112235999999999999999999999999999999999


Q ss_pred             cCceecch---hHHHHHH---------HHhhHhhc----cccccCCchHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 022522          181 FGNCIEAS---YVACSAQ---------FVGKSQNF----DKSQSENDWVVN--LATSTMLFSILQLLWQAVFFMWHIYCV  242 (296)
Q Consensus       181 i~nCIG~~---y~~~~~~---------~~~~~~~~----~~~~~~~~~~~~--~~~~~~~~~~~~~i~v~~Ll~~q~~lI  242 (296)
                      +|||||.+   ||+....         ........    ............  ..+..++.+++..++++.+++.|++++
T Consensus        82 ~~~cIG~~N~~~F~~fl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i  161 (174)
T PF01529_consen   82 LGNCIGRRNHRYFLLFLLYLCLYCLYFFILSLYYLVRYIPSISFSSFWIFSNFSSIFLLIISIFFFIFVGFLLIFQLYLI  161 (174)
T ss_pred             hccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            99999996   3321111         00000011    111111111111  114567777888999999999999999


Q ss_pred             HhChhhHHhhhcc
Q 022522          243 CFNVRTDEWVNWK  255 (296)
Q Consensus       243 ~~n~TT~E~~~~~  255 (296)
                      ++|+||+|.+++|
T Consensus       162 ~~n~Tt~E~~~~~  174 (174)
T PF01529_consen  162 LRNITTYERIKRK  174 (174)
T ss_pred             HcCCcHHHHHHcC
Confidence            9999999999753

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. This entry represents the DHHC-type zinc finger domain, which is also known as NEW1 []. The DHHC Zn-finger was first isolated in the Drosophila putative transcription factor DNZ1 and was named after a conserved sequence motif []. This domain has palmitoyltransferase activity; this post-translational modification attaches the C16 saturated fatty acid palmitate via a thioester linkage, predominantly to cysteine residues []. This domain is found in the DHHC proteins which are palmitoyl transferases []; the DHHC motif is found within a cysteine-rich domain which is thought to contain the catalytic site. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0008270 zinc ion binding

>COG5273 Uncharacterized protein containing DHHC-type Zn finger [General function prediction only]

Probab=99.96  E-value=1.3e-29  Score=233.59  Aligned_cols=195  Identities=18%  Similarity=0.210  Sum_probs=126.2

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHhhcCCCccCCCCCCc--ccc------ccCCCCCCCCCCCCCCCCCCCccccccCcccc
Q 022522          101 SSLIGGLFNIEVAMIIIGLCSIMSKDPGLITNEFPHL--DKL------VEGSELGVDPDNENSLSRKRVRYCKICKAHVE  172 (296)
Q Consensus       101 ~~~~~~~f~~~~~~~~~~~~~~~~~dPG~vp~~~~~~--~~~------~~~~~~~~~C~~C~~~kP~Rs~HC~~C~~CV~  172 (296)
                      .....+.+.+...+...++++.+.+|||+.+++....  ++.      .+.+...++|.+|+.+||+|||||+.||+||+
T Consensus        55 ~~~~~i~~~~i~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~C~~~KP~RS~HC~~Cn~CV~  134 (309)
T COG5273          55 VVLFIILFIVILVLASFSYLLLLVSDPGYLGENITLSGYRETISRLLDDGKFGTENFCSTCNIYKPPRSHHCSICNRCVL  134 (309)
T ss_pred             hhhhhhhhhhhhhhHHHhhHHHhhcCCCccCccccccchhhhhhhhhhcCccccceeccccccccCCCCccchhhcchhh
Confidence            3556777788888889999999999999998664321  111      11122469999999999999999999999999


Q ss_pred             cccCcccccCceecchh---HH-H-HH-------HHHhhHhhccccccC--CchHH-H-HHHHHHHHHHHHHHHHHHHHH
Q 022522          173 GFDHHCPAFGNCIEASY---VA-C-SA-------QFVGKSQNFDKSQSE--NDWVV-N-LATSTMLFSILQLLWQAVFFM  236 (296)
Q Consensus       173 r~DHHCpWi~nCIG~~y---~~-~-~~-------~~~~~~~~~~~~~~~--~~~~~-~-~~~~~~~~~~~~~i~v~~Ll~  236 (296)
                      ||||||||+|||||.++   |. . .+       .+...+.++..+...  ++... . ++......+...++.+..++.
T Consensus       135 k~DHHC~Wi~nCVG~~N~r~F~~Fl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~~~f~~~~~~~~  214 (309)
T COG5273         135 KFDHHCPWINNCVGFRNYRFFYQFLLYTILVALVVLLSTAYYIAGIFSIRHDTSLAICFLIFGCSLLGVVFFIITTLLLL  214 (309)
T ss_pred             ccCccCcccccccCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccCChHHHHHHHHHhhhHHHHHHHHHHHHHHH
Confidence            99999999999999972   21 1 11       111112233333211  11111 2 222223445556677778889


Q ss_pred             HHHHHHHhChhhHHhhhccCCCccccc---cCCC---CC-cccCCCccCCCCHhHHHHHHHhcCCC
Q 022522          237 WHIYCVCFNVRTDEWVNWKKYPEFQVI---ESEP---GE-SFTRMRFTNPYDKGFLQNVKDFLSLR  295 (296)
Q Consensus       237 ~q~~lI~~n~TT~E~~~~~r~~~~~~~---~~~~---~~-~~~~~~~~npyd~G~~~Nl~effg~~  295 (296)
                      ++.+++..|+||+|.....|....-..   ..+.   .+ .....+..+|++.|.-+|+..+++.+
T Consensus       215 ~~~~~~~~~~t~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~i~~~~  280 (309)
T COG5273         215 FLIYLILNNLTTIEFIQISRGGSTLEFFPLCRESNLPFTNIFDSSEGALPLDLGIGQNLSTIKGSN  280 (309)
T ss_pred             HHHHHHHhhHHHHHHHHhccceecccccchhccCCcCceeccCCCccccccccCccccceeecCCC
Confidence            999999999999999875444332211   0000   00 11112256788888888888877654

>KOG1313 consensus DHHC-type Zn-finger proteins [General function prediction only]

Probab=99.96  E-value=5.9e-30  Score=224.32  Aligned_cols=139  Identities=21%  Similarity=0.242  Sum_probs=97.0

Q ss_pred             CCCCCCCCCCCCCCCCccccccCcccccccCcccccCceecch---hHHH---------HHHHHhhHhhc-------ccc
Q 022522          146 LGVDPDNENSLSRKRVRYCKICKAHVEGFDHHCPAFGNCIEAS---YVAC---------SAQFVGKSQNF-------DKS  206 (296)
Q Consensus       146 ~~~~C~~C~~~kP~Rs~HC~~C~~CV~r~DHHCpWi~nCIG~~---y~~~---------~~~~~~~~~~~-------~~~  206 (296)
                      ++.+|.+|..+||+|+|||+.|||||+||||||||+|||||+.   ||..         .+..++....+       .++
T Consensus       101 ~~SfC~KC~~pK~prTHHCsiC~kCVL~MDHHCPwinnCVG~~NHryFFlFl~~ltlat~~~~i~~~~~w~~~le~~~~~  180 (309)
T KOG1313|consen  101 NDSFCNKCNYPKSPRTHHCSICNKCVLKMDHHCPWINNCVGAHNHRYFFLFLFYLTLATSYAAIMCVYTWIDHLEPIEEI  180 (309)
T ss_pred             cccHHhhcCCCCCCCcchhhHHhhHhhccccCCchhhcccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHhcchHhhc
Confidence            4689999999999999999999999999999999999999984   4321         11111111100       011


Q ss_pred             -------ccCCch---H-------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChhhHHhhhcc--CCCccccccCCC
Q 022522          207 -------QSENDW---V-------VNLATSTMLFSILQLLWQAVFFMWHIYCVCFNVRTDEWVNWK--KYPEFQVIESEP  267 (296)
Q Consensus       207 -------~~~~~~---~-------~~~~~~~~~~~~~~~i~v~~Ll~~q~~lI~~n~TT~E~~~~~--r~~~~~~~~~~~  267 (296)
                             ....|.   .       ........+.++..++.++.+..+|.++|.+|.|.+|+...+  |.++..      
T Consensus       181 tay~~d~~h~~Pp~~i~r~~~~i~~t~~~~~~fls~~~lv~vg~l~~W~~vlI~~G~tsi~~~~~~~e~k~~~a------  254 (309)
T KOG1313|consen  181 TAYASDVAHVAPPPSILRVYKNITRTSIANLWFLSVRVLVAVGLLTAWHAVLISRGETSIEQLINIKERKRYLA------  254 (309)
T ss_pred             ccccCcccccCCChhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhheeeehhhhhHHHHHHHHHhHhHHH------
Confidence                   011111   0       011234556666677788889999999999999999997632  333222      


Q ss_pred             CCcccCCCccCCCCHhHHHHHHHhcCCCC
Q 022522          268 GESFTRMRFTNPYDKGFLQNVKDFLSLRR  296 (296)
Q Consensus       268 ~~~~~~~~~~npyd~G~~~Nl~effg~~r  296 (296)
                            +...||+|.|..+||+.|+|-.|
T Consensus       255 ------~~R~~~~n~g~k~nWr~fLg~~~  277 (309)
T KOG1313|consen  255 ------HLRSNPTNFGGKANWRNFLGLFR  277 (309)
T ss_pred             ------hccCCCcccchHHHHHHhhcccc
Confidence                  12379999999999999999764

>KOG1312 consensus DHHC-type Zn-finger proteins [General function prediction only]

Probab=99.91  E-value=2.1e-24  Score=190.45  Aligned_cols=76  Identities=28%  Similarity=0.392  Sum_probs=61.5

Q ss_pred             HHHHHHHHHHhhcCCCccCCCCCCc-cccccCCC----CCCCCCCCCCCCCCCCccccccCcccccccCcccccCceecc
Q 022522          113 AMIIIGLCSIMSKDPGLITNEFPHL-DKLVEGSE----LGVDPDNENSLSRKRVRYCKICKAHVEGFDHHCPAFGNCIEA  187 (296)
Q Consensus       113 ~~~~~~~~~~~~~dPG~vp~~~~~~-~~~~~~~~----~~~~C~~C~~~kP~Rs~HC~~C~~CV~r~DHHCpWi~nCIG~  187 (296)
                      ++=..++..+..+|||.+.++++.. .+.-+.|.    ...-|+||+.+||.|||||+.||+||+||||||.|+|||||+
T Consensus       109 ivp~i~f~ltc~snpg~i~k~n~s~~~~~ypYDy~if~k~~kCSTCki~KPARSKHCsiCNrCV~rfDHHCiWiNNCIG~  188 (341)
T KOG1312|consen  109 IVPLIFFTLTCGSNPGIITKANESLFLHVYPYDYVIFPKNVKCSTCKIRKPARSKHCSICNRCVHRFDHHCIWINNCIGA  188 (341)
T ss_pred             HHHHHHHhhhhcCCCCccchhhhccceeccCccceeecCCCccccccCCCccccccchHHHHHHHHhccceEeeeccccc
Confidence            3335677888999999999876532 22223331    237899999999999999999999999999999999999999


Q ss_pred             h
Q 022522          188 S  188 (296)
Q Consensus       188 ~  188 (296)
                      +
T Consensus       189 ~  189 (341)
T KOG1312|consen  189 W  189 (341)
T ss_pred             c
Confidence            6

>PF13240 zinc_ribbon_2: zinc-ribbon domain

Probab=88.63  E-value=0.3  Score=27.29  Aligned_cols=21  Identities=14%  Similarity=0.298  Sum_probs=18.4

Q ss_pred             CCCCCCCCCCCCCccccccCc
Q 022522          149 DPDNENSLSRKRVRYCKICKA  169 (296)
Q Consensus       149 ~C~~C~~~kP~Rs~HC~~C~~  169 (296)
                      +|+.|...-++.++.|..|+.
T Consensus         1 ~Cp~CG~~~~~~~~fC~~CG~   21 (23)
T PF13240_consen    1 YCPNCGAEIEDDAKFCPNCGT   21 (23)
T ss_pred             CCcccCCCCCCcCcchhhhCC
Confidence            689999999999999998875

>KOG1311 consensus DHHC-type Zn-finger proteins [General function prediction only]

Probab=86.30  E-value=1.2  Score=40.96  Aligned_cols=29  Identities=24%  Similarity=0.599  Sum_probs=26.6

Q ss_pred             CCccccccCcccccccCcccccCceecch
Q 022522          160 RVRYCKICKAHVEGFDHHCPAFGNCIEAS  188 (296)
Q Consensus       160 Rs~HC~~C~~CV~r~DHHCpWi~nCIG~~  188 (296)
                      +.|+|..|+..+.++-|||+.-|+||...
T Consensus       112 ~~~~C~~C~~~rPpRs~HCsvC~~CV~rf  140 (299)
T KOG1311|consen  112 EWKYCDTCQLYRPPRSSHCSVCNNCVLRF  140 (299)
T ss_pred             ceEEcCcCcccCCCCcccchhhccccccc
Confidence            37999999999999999999999999654

>PF13248 zf-ribbon_3: zinc-ribbon domain

Probab=85.17  E-value=0.62  Score=26.68  Aligned_cols=22  Identities=18%  Similarity=0.283  Sum_probs=18.9

Q ss_pred             CCCCCCCCCCCCCCccccccCc
Q 022522          148 VDPDNENSLSRKRVRYCKICKA  169 (296)
Q Consensus       148 ~~C~~C~~~kP~Rs~HC~~C~~  169 (296)
                      ++|+.|...-++.++.|+.|+.
T Consensus         3 ~~Cp~Cg~~~~~~~~fC~~CG~   24 (26)
T PF13248_consen    3 MFCPNCGAEIDPDAKFCPNCGA   24 (26)
T ss_pred             CCCcccCCcCCcccccChhhCC
Confidence            6899999988888999998875

>PRK04136 rpl40e 50S ribosomal protein L40e; Provisional

Probab=82.45  E-value=0.81  Score=30.26  Aligned_cols=24  Identities=17%  Similarity=0.052  Sum_probs=21.8

Q ss_pred             CCCCCCCCCCCCCCCCccccccCc
Q 022522          146 LGVDPDNENSLSRKRVRYCKICKA  169 (296)
Q Consensus       146 ~~~~C~~C~~~kP~Rs~HC~~C~~  169 (296)
                      ....|..|..+-|+|+..|+.|+.
T Consensus        13 ~k~ICrkC~ARnp~~A~~CRKCg~   36 (48)
T PRK04136         13 NKKICMRCNARNPWRATKCRKCGY   36 (48)
T ss_pred             cccchhcccCCCCccccccccCCC
Confidence            458899999999999999998876

>PTZ00303 phosphatidylinositol kinase; Provisional

Probab=80.69  E-value=1.2  Score=45.84  Aligned_cols=22  Identities=14%  Similarity=0.166  Sum_probs=18.6

Q ss_pred             CCCCCCCCCCC-------CCCccccccCc
Q 022522          148 VDPDNENSLSR-------KRVRYCKICKA  169 (296)
Q Consensus       148 ~~C~~C~~~kP-------~Rs~HC~~C~~  169 (296)
                      +-|..|+..-.       .|-||||.|++
T Consensus       461 dtC~~C~kkFfSlsK~L~~RKHHCRkCGr  489 (1374)
T PTZ00303        461 DSCPSCGRAFISLSRPLGTRAHHCRSCGI  489 (1374)
T ss_pred             CcccCcCCcccccccccccccccccCCcc
Confidence            67999998874       39999999877

>PF12773 DZR: Double zinc ribbon

Probab=80.60  E-value=1.7  Score=28.66  Aligned_cols=34  Identities=15%  Similarity=0.196  Sum_probs=26.1

Q ss_pred             CCCCCCCCCCCC---CCCccccccCcccccccCcccc
Q 022522          147 GVDPDNENSLSR---KRVRYCKICKAHVEGFDHHCPA  180 (296)
Q Consensus       147 ~~~C~~C~~~kP---~Rs~HC~~C~~CV~r~DHHCpW  180 (296)
                      .+||..|...-+   ...++|..|++=+...+.+|+.
T Consensus        12 ~~fC~~CG~~l~~~~~~~~~C~~Cg~~~~~~~~fC~~   48 (50)
T PF12773_consen   12 AKFCPHCGTPLPPPDQSKKICPNCGAENPPNAKFCPN   48 (50)
T ss_pred             ccCChhhcCChhhccCCCCCCcCCcCCCcCCcCccCc
Confidence            588888888766   3457788888888888888874

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	296
2ayj_A	56	50S ribosomal protein L40E; Zn-binding, beta-stran	81.09

>2ayj_A 50S ribosomal protein L40E; Zn-binding, beta-strand protein, structural genomics, PSI, protein structure initiative; NMR {Sulfolobus solfataricus} SCOP: g.41.8.7

Probab=81.09  E-value=0.74  Score=30.57  Aligned_cols=28  Identities=18%  Similarity=0.208  Sum_probs=23.6

Q ss_pred             CCCCCCCCCCCCCCCCccccccCccccc
Q 022522          146 LGVDPDNENSLSRKRVRYCKICKAHVEG  173 (296)
Q Consensus       146 ~~~~C~~C~~~kP~Rs~HC~~C~~CV~r  173 (296)
                      ....|..|..+-|+|+.-|+.|+..-+|
T Consensus        18 ~k~ICrkC~ARnp~~A~~CRKCg~~~LR   45 (56)
T 2ayj_A           18 LKKVCRKCGALNPIRATKCRRCHSTNLR   45 (56)
T ss_dssp             CCEEETTTCCEECTTCSSCTTTCCCCEE
T ss_pred             chhhhccccCcCCcccccccCCCCCCCC
Confidence            3578999999999999999999865443

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	296
d2ayja1	56	Ribosomal protein L40e {Sulfolobus solfataricus [T	84.93

>d2ayja1 g.41.8.7 (A:1-56) Ribosomal protein L40e {Sulfolobus solfataricus [TaxId: 2287]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Zn-binding ribosomal proteins
family: Ribosomal protein L40e
domain: Ribosomal protein L40e
species: Sulfolobus solfataricus [TaxId: 2287]

Probab=84.93  E-value=0.21  Score=31.42  Aligned_cols=24  Identities=21%  Similarity=0.329  Sum_probs=21.4

Q ss_pred             CCCCCCCCCCCCCCCCccccccCc
Q 022522          146 LGVDPDNENSLSRKRVRYCKICKA  169 (296)
Q Consensus       146 ~~~~C~~C~~~kP~Rs~HC~~C~~  169 (296)
                      ....|..|..+-|+|+..|+.|+.
T Consensus        18 ~k~ICrkC~AR~p~rAt~CRKCg~   41 (56)
T d2ayja1          18 LKKVCRKCGALNPIRATKCRRCHS   41 (56)
T ss_dssp             CCEEETTTCCEECTTCSSCTTTCC
T ss_pred             hhHHHhhccccCCccccccccCCC
Confidence            458899999999999999998875