Citrus Sinensis ID: 022534
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
|
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 295 | 2.2.26 [Sep-21-2011] | |||||||
| Q6Q3H0 | 310 | Haloalkane dehalogenase O | N/A | no | 0.844 | 0.803 | 0.290 | 3e-13 | |
| P22643 | 310 | Haloalkane dehalogenase O | yes | no | 0.844 | 0.803 | 0.290 | 3e-13 | |
| Q73Y99 | 301 | Haloalkane dehalogenase O | N/A | no | 0.705 | 0.691 | 0.286 | 5e-11 | |
| Q93K00 | 301 | Haloalkane dehalogenase O | yes | no | 0.705 | 0.691 | 0.286 | 5e-11 | |
| Q98C03 | 309 | Haloalkane dehalogenase O | yes | no | 0.518 | 0.495 | 0.288 | 5e-11 | |
| P53750 | 290 | Uncharacterized hydrolase | yes | no | 0.772 | 0.786 | 0.280 | 1e-10 | |
| P64301 | 300 | Haloalkane dehalogenase 1 | yes | no | 0.661 | 0.65 | 0.309 | 2e-10 | |
| P64302 | 300 | Haloalkane dehalogenase 1 | yes | no | 0.661 | 0.65 | 0.309 | 2e-10 | |
| P0A3G3 | 293 | Haloalkane dehalogenase O | N/A | no | 0.796 | 0.802 | 0.272 | 2e-09 | |
| P0A3G2 | 293 | Haloalkane dehalogenase O | N/A | no | 0.796 | 0.802 | 0.272 | 2e-09 |
| >sp|Q6Q3H0|DHLA_XANFL Haloalkane dehalogenase OS=Xanthobacter flavus GN=dhlA PE=3 SV=1 | Back alignment and function desciption |
|---|
Score = 75.9 bits (185), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 82/282 (29%), Positives = 128/282 (45%), Gaps = 33/282 (11%)
Query: 27 ETGSADSRLGTIVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDF 86
+ G++D+ + LHG P+ SY YR ++ +++G APD+ GFG SDKP D+
Sbjct: 40 DEGNSDAE-DVFLCLHGEPTWSYLYRKMIPVFAESGARVIAPDFFGFGKSDKP---VDEE 95
Query: 87 DFTENEFHEE-LDKLLDVLEVKYPFFLVVQ---GFLVGSYGLTWALKNPSRISKLAILNS 142
D+T EFH L L++ L+++ LVVQ GFL GLT + +PSR +L I+N+
Sbjct: 96 DYT-FEFHRNFLLALIERLDLRN-ITLVVQDWGGFL----GLTLPMADPSRFKRLIIMNA 149
Query: 143 PLTASSPLPGLFQQLRIPLLGEFTA-------QNAIMAERFIEAGSPYVLKLDKADVYRL 195
L F FTA + + ++F++ +P L +A Y
Sbjct: 150 CLMTDPVTQPAFSAFVTQPADGFTAWKYDLVTPSDLRLDQFMKRWAP-TLTEAEASAYAA 208
Query: 196 PYLASSGPG----FALLEAARKVNFKDISSRIGAGFSSGSWDKPVLVAWGISDKYLPQSV 251
P+ +S F + A R DIS+ F W+ +A G+ DK L V
Sbjct: 209 PFPDTSYQAGVRKFPKMVAQRDQACIDISTE-AISFWQNDWNGQTFMAIGMKDKLLGPDV 267
Query: 252 ---AEEFQKGNPNVVKLQMIEGAGHMPQEDWPEKVVDGLRYF 290
+ G P ++ I AGH QE + + L++F
Sbjct: 268 MYPMKALINGCPEPLE---IADAGHFVQEFGEQVAREALKHF 306
|
Catalyzes hydrolytic cleavage of carbon-halogen bonds in halogenated aliphatic compounds, leading to the formation of the corresponding primary alcohols, halide ions and protons. Has a broad substrate specificity, which includes terminally mono- and di- chlorinated and brominated alkanes (up to C4 only). The highest activity was found with 1,2-dichloroethane, 1,3-dichloropropane, and 1,2-dibromoethane. Xanthobacter flavus (taxid: 281) EC: 3EC: .EC: 8EC: .EC: 1EC: .EC: 5 |
| >sp|P22643|DHLA_XANAU Haloalkane dehalogenase OS=Xanthobacter autotrophicus GN=dhlA PE=1 SV=2 | Back alignment and function description |
|---|
Score = 75.9 bits (185), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 82/282 (29%), Positives = 128/282 (45%), Gaps = 33/282 (11%)
Query: 27 ETGSADSRLGTIVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDF 86
+ G++D+ + LHG P+ SY YR ++ +++G APD+ GFG SDKP D+
Sbjct: 40 DEGNSDAE-DVFLCLHGEPTWSYLYRKMIPVFAESGARVIAPDFFGFGKSDKP---VDEE 95
Query: 87 DFTENEFHEE-LDKLLDVLEVKYPFFLVVQ---GFLVGSYGLTWALKNPSRISKLAILNS 142
D+T EFH L L++ L+++ LVVQ GFL GLT + +PSR +L I+N+
Sbjct: 96 DYT-FEFHRNFLLALIERLDLRN-ITLVVQDWGGFL----GLTLPMADPSRFKRLIIMNA 149
Query: 143 PLTASSPLPGLFQQLRIPLLGEFTA-------QNAIMAERFIEAGSPYVLKLDKADVYRL 195
L F FTA + + ++F++ +P L +A Y
Sbjct: 150 CLMTDPVTQPAFSAFVTQPADGFTAWKYDLVTPSDLRLDQFMKRWAP-TLTEAEASAYAA 208
Query: 196 PYLASSGPG----FALLEAARKVNFKDISSRIGAGFSSGSWDKPVLVAWGISDKYLPQSV 251
P+ +S F + A R DIS+ F W+ +A G+ DK L V
Sbjct: 209 PFPDTSYQAGVRKFPKMVAQRDQACIDISTE-AISFWQNDWNGQTFMAIGMKDKLLGPDV 267
Query: 252 ---AEEFQKGNPNVVKLQMIEGAGHMPQEDWPEKVVDGLRYF 290
+ G P ++ I AGH QE + + L++F
Sbjct: 268 MYPMKALINGCPEPLE---IADAGHFVQEFGEQVAREALKHF 306
|
Catalyzes hydrolytic cleavage of carbon-halogen bonds in halogenated aliphatic compounds, leading to the formation of the corresponding primary alcohols, halide ions and protons. Has a broad substrate specificity, which includes terminally mono- and di- chlorinated and brominated alkanes (up to C4 only). The highest activity was found with 1,2-dichloroethane, 1,3-dichloropropane, and 1,2-dibromoethane. Xanthobacter autotrophicus (taxid: 280) EC: 3 EC: . EC: 8 EC: . EC: 1 EC: . EC: 5 |
| >sp|Q73Y99|DHMA_MYCPA Haloalkane dehalogenase OS=Mycobacterium paratuberculosis (strain ATCC BAA-968 / K-10) GN=dhmA PE=3 SV=1 | Back alignment and function description |
|---|
Score = 68.6 bits (166), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 73/255 (28%), Positives = 108/255 (42%), Gaps = 47/255 (18%)
Query: 38 IVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTEN-----E 92
IV LHG P+ SY YR +++ ++DAG APD +GFG SDKP + +D+ + +
Sbjct: 49 IVLLHGEPTWSYLYRTMITPLTDAGNRVLAPDLIGFGRSDKPSR-IEDYSYQRHVDWVVS 107
Query: 93 FHEELDKLLDVLEVKYPFFLVVQGFLVGSYGLTWALKNPSRISKLAILNSPL-TASSPLP 151
+ E L+ L DV F+ G L+ GL A + P R+ +L + N L TA P
Sbjct: 108 WFEHLN-LSDVT-----LFVQDWGSLI---GLRIAAEQPDRVGRLVVANGFLPTAQRRTP 158
Query: 152 GLFQQLRI-----PLLGEFTAQNAIMAERF---IEAG--SPYVLKLDKADVYRLPYLASS 201
F R P+L + R + AG +P+ K +A P L +
Sbjct: 159 PAFYAWRAFARYSPVLPAGRIVSVGTVRRVSSKVRAGYDAPFPDKTYQAGARAFPQLVPT 218
Query: 202 GPGFALLEAARKVNFKDISSRIGAGFSSGSWDKPVLVAWGISDKYLPQSVAEEFQKGNPN 261
P + A RK A + G W+KP L +G D L G+ +
Sbjct: 219 SPADPAIPANRK-----------AWEALGRWEKPFLAIFGARDPIL----------GHAD 257
Query: 262 VVKLQMIEGAGHMPQ 276
++ I GA P
Sbjct: 258 SPLIKHIPGAAGQPH 272
|
Catalyzes hydrolytic cleavage of carbon-halogen bonds in halogenated aliphatic compounds, leading to the formation of the corresponding primary alcohols, halide ions and protons. Mycobacterium paratuberculosis (taxid: 1770) EC: 3 EC: . EC: 8 EC: . EC: 1 EC: . EC: 5 |
| >sp|Q93K00|DHMA_MYCAV Haloalkane dehalogenase OS=Mycobacterium avium GN=dhmA PE=1 SV=1 | Back alignment and function description |
|---|
Score = 68.6 bits (166), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 73/255 (28%), Positives = 108/255 (42%), Gaps = 47/255 (18%)
Query: 38 IVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTEN-----E 92
IV LHG P+ SY YR +++ ++DAG APD +GFG SDKP + +D+ + +
Sbjct: 49 IVLLHGEPTWSYLYRTMITPLTDAGNRVLAPDLIGFGRSDKPSR-IEDYSYQRHVDWVVS 107
Query: 93 FHEELDKLLDVLEVKYPFFLVVQGFLVGSYGLTWALKNPSRISKLAILNSPL-TASSPLP 151
+ E L+ L DV F+ G L+ GL A + P R+ +L + N L TA P
Sbjct: 108 WFEHLN-LSDVT-----LFVQDWGSLI---GLRIAAEQPDRVGRLVVANGFLPTAQRRTP 158
Query: 152 GLFQQLRI-----PLLGEFTAQNAIMAERF---IEAG--SPYVLKLDKADVYRLPYLASS 201
F R P+L + R + AG +P+ K +A P L +
Sbjct: 159 PAFYAWRAFARYSPVLPAGRIVSVGTVRRVSSKVRAGYDAPFPDKTYQAGARAFPQLVPT 218
Query: 202 GPGFALLEAARKVNFKDISSRIGAGFSSGSWDKPVLVAWGISDKYLPQSVAEEFQKGNPN 261
P + A RK A + G W+KP L +G D L G+ +
Sbjct: 219 SPADPAIPANRK-----------AWEALGRWEKPFLAIFGARDPIL----------GHAD 257
Query: 262 VVKLQMIEGAGHMPQ 276
++ I GA P
Sbjct: 258 SPLIKHIPGAAGQPH 272
|
Catalyzes hydrolytic cleavage of carbon-halogen bonds in halogenated aliphatic compounds, leading to the formation of the corresponding primary alcohols, halide ions and protons. Has a broad substrate specificity, which includes mono- and di-chlorinated and brominated linear alkanes (up to at least C4). Shows good activity with the priority pollutant 1,2-dichloroethane. Mycobacterium avium (taxid: 1764) EC: 3 EC: . EC: 8 EC: . EC: 1 EC: . EC: 5 |
| >sp|Q98C03|DHAA_RHILO Haloalkane dehalogenase OS=Rhizobium loti (strain MAFF303099) GN=dhaA PE=3 SV=1 | Back alignment and function description |
|---|
Score = 68.6 bits (166), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 80/170 (47%), Gaps = 17/170 (10%)
Query: 37 TIVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEE 96
T++FLHG P+ S+ +RN++ ++ G C APD +G+G S KP+ Y FD
Sbjct: 38 TVLFLHGNPTSSHIWRNIIPHVAPFG-RCIAPDLIGYGQSGKPDIDYRFFDHVRY----- 91
Query: 97 LDKLLDVLEVKYPFFLVVQGFLVGSYGLTWALKNPSRISKLAILN--------SPLTASS 148
LD LD L+++ LV Q + + A + P R+ LA +
Sbjct: 92 LDAFLDALDIRD-VLLVAQDWGT-ALAFHLAARRPQRVLGLAFMEFIRPFERWEDFHQRP 149
Query: 149 PLPGLFQQLRIPLLGE-FTAQNAIMAERFIEAGSPYVLKLDKADVYRLPY 197
+F+ LR P +GE ++ + E+ + A + D+ DVYR P+
Sbjct: 150 QAREMFKALRTPGVGEKLVLEDNVFVEKVLPASVLRAMSDDEMDVYRAPF 199
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Catalyzes hydrolytic cleavage of carbon-halogen bonds in halogenated aliphatic compounds, leading to the formation of the corresponding primary alcohols, halide ions and protons. Rhizobium loti (strain MAFF303099) (taxid: 266835) EC: 3 EC: . EC: 8 EC: . EC: 1 EC: . EC: 5 |
| >sp|P53750|YN93_YEAST Uncharacterized hydrolase YNR064C OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YNR064C PE=3 SV=1 | Back alignment and function description |
|---|
Score = 67.4 bits (163), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 75/267 (28%), Positives = 126/267 (47%), Gaps = 39/267 (14%)
Query: 16 IKSGEYRWFVRETGSADSRLGTIVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGFGF 75
++ G W+ RE G+A + TI+ LHG P+ S +RN++ ++ FH APD GFGF
Sbjct: 13 VQDGVKVWY-REAGAAGNP--TILLLHGFPTSSNMFRNLIPLLA-GQFHIIAPDLPGFGF 68
Query: 76 SDKPEKGYDDFDFTENEFHEELDKLLDVLEV-KYPFFLVVQGFLVGSYGLTWALKNPSRI 134
++ PE ++ F+ + E + LLD L + K+ ++ G V G ALK PSRI
Sbjct: 69 TETPE----NYKFSFDSLCESIGYLLDTLSIEKFAMYIFDYGSPV---GFRLALKFPSRI 121
Query: 135 SKLAILNSPLTASSPLPGLFQQLRIPLLGEFTAQNAIMAERFIEAGSPYVLKLDKADVYR 194
+ + N ++ GL + PL + + + F+++ PY+ D A+V
Sbjct: 122 TGIVTQN----GNAYEEGLDDRFWGPLKEYWKSYQS--DPVFVKSLIPYL--EDPANVIC 173
Query: 195 -----LPYLASSGPGFALLEAA--RKVNFKDISSRIGAGFSSG-----SWDK-------P 235
+P + S P L+ A ++ DI R+ + + ++ K P
Sbjct: 174 QYHDGVPAIESVDPAAYTLDIALIQRTGQTDIQLRLFFDYQNNIKLYPAFQKFLRDSKIP 233
Query: 236 VLVAWGISDKYLPQSVAEEFQKGNPNV 262
VLVAWG +D + AE ++K N+
Sbjct: 234 VLVAWGANDTIFSVAGAEAYRKDVDNL 260
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Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292) EC: 3 EC: . EC: 1 EC: . EC: - EC: . EC: - |
| >sp|P64301|DHMA1_MYCTU Haloalkane dehalogenase 1 OS=Mycobacterium tuberculosis GN=dhmA1 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 67.0 bits (162), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 70/226 (30%), Positives = 99/226 (43%), Gaps = 31/226 (13%)
Query: 38 IVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEEL 97
IV LHG P+ SY YR ++ +S AG APD +GFG SDKP + D E+
Sbjct: 49 IVLLHGEPTWSYLYRTMIPPLSAAGHRVLAPDLIGFGRSDKPTRIEDYTYLRHVEWVTSW 108
Query: 98 DKLLDVLEVKYPFFLVVQGFLVGSYGLTWALKNPSRISKLAILNSPLTAS---SPLPGLF 154
+ LD+ +V F+ G L+ GL A ++ RI++L + N L A+ +PLP F
Sbjct: 109 FENLDLHDVT--LFVQDWGSLI---GLRIAAEHGDRIARLVVANGFLPAAQGRTPLP--F 161
Query: 155 QQLRI-----PLLGEFTAQNAIMAERF---IEAG--SPYVLKLDKADVYRLPYLASSGPG 204
R P+L N R + AG +P+ K +A P L + P
Sbjct: 162 YVWRAFARYSPVLPAGRLVNFGTVHRVPAGVRAGYDAPFPDKTYQAGARAFPRLVPTSPD 221
Query: 205 FALLEAARKVNFKDISSRIGAGFSSGSWDKPVLVAWGISDKYLPQS 250
+ A R A + G WDKP L +G D L Q+
Sbjct: 222 DPAVPANR-----------AAWEALGRWDKPFLAIFGYRDPILGQA 256
|
Catalyzes hydrolytic cleavage of carbon-halogen bonds in halogenated aliphatic compounds, leading to the formation of the corresponding primary alcohols, halide ions and protons. Mycobacterium tuberculosis (taxid: 1773) EC: 3 EC: . EC: 8 EC: . EC: 1 EC: . EC: 5 |
| >sp|P64302|DHMA1_MYCBO Haloalkane dehalogenase 1 OS=Mycobacterium bovis (strain ATCC BAA-935 / AF2122/97) GN=dhmA1 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 67.0 bits (162), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 70/226 (30%), Positives = 99/226 (43%), Gaps = 31/226 (13%)
Query: 38 IVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEEL 97
IV LHG P+ SY YR ++ +S AG APD +GFG SDKP + D E+
Sbjct: 49 IVLLHGEPTWSYLYRTMIPPLSAAGHRVLAPDLIGFGRSDKPTRIEDYTYLRHVEWVTSW 108
Query: 98 DKLLDVLEVKYPFFLVVQGFLVGSYGLTWALKNPSRISKLAILNSPLTAS---SPLPGLF 154
+ LD+ +V F+ G L+ GL A ++ RI++L + N L A+ +PLP F
Sbjct: 109 FENLDLHDVT--LFVQDWGSLI---GLRIAAEHGDRIARLVVANGFLPAAQGRTPLP--F 161
Query: 155 QQLRI-----PLLGEFTAQNAIMAERF---IEAG--SPYVLKLDKADVYRLPYLASSGPG 204
R P+L N R + AG +P+ K +A P L + P
Sbjct: 162 YVWRAFARYSPVLPAGRLVNFGTVHRVPAGVRAGYDAPFPDKTYQAGARAFPRLVPTSPD 221
Query: 205 FALLEAARKVNFKDISSRIGAGFSSGSWDKPVLVAWGISDKYLPQS 250
+ A R A + G WDKP L +G D L Q+
Sbjct: 222 DPAVPANR-----------AAWEALGRWDKPFLAIFGYRDPILGQA 256
|
Catalyzes hydrolytic cleavage of carbon-halogen bonds in halogenated aliphatic compounds, leading to the formation of the corresponding primary alcohols, halide ions and protons. Mycobacterium bovis (taxid: 1765) EC: 3 EC: . EC: 8 EC: . EC: 1 EC: . EC: 5 |
| >sp|P0A3G3|DHAA_RHOSO Haloalkane dehalogenase OS=Rhodococcus sp. GN=dhaA PE=1 SV=1 | Back alignment and function description |
|---|
Score = 63.5 bits (153), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 73/268 (27%), Positives = 114/268 (42%), Gaps = 33/268 (12%)
Query: 34 RLGT-IVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTENE 92
R GT ++FLHG P+ SY +RN++ ++ + C APD +G G SDKP D D+ ++
Sbjct: 30 RDGTPVLFLHGNPTSSYLWRNIIPHVAPS-HRCIAPDLIGMGKSDKP-----DLDYFFDD 83
Query: 93 FHEELDKLLDVLEVKYPFFLVVQGFLVGSYGLTWALKNPSRISKLAILN--SPLTASSPL 150
LD ++ L ++ LV+ + + G WA +NP R+ +A + P+
Sbjct: 84 HVRYLDAFIEALGLEE-VVLVIHDW-GSALGFHWAKRNPERVKGIACMEFIRPIPTWDEW 141
Query: 151 PGL----FQQLRIPLLGE--FTAQNAIMAERFIEAGSPYV----LKLDKADVYRLPYLAS 200
P FQ R +G QNA FIE P L + D YR P+L
Sbjct: 142 PEFARETFQAFRTADVGRELIIDQNA-----FIEGALPKCVVRPLTEVEMDHYREPFLKP 196
Query: 201 SGPGFALLEAARKVNFKDISSRIGAGFSS-GSW----DKPVLVAWGISDKYLPQSVAEEF 255
L ++ + I A + +W P L+ WG +P + A
Sbjct: 197 VD-REPLWRFPNELPIAGEPANIVALVEAYMNWLHQSPVPKLLFWGTPGVLIPPAEAARL 255
Query: 256 QKGNPNVVKLQMIEGAGHMPQEDWPEKV 283
+ PN + + G H QED P+ +
Sbjct: 256 AESLPNCKTVDIGPGL-HYLQEDNPDLI 282
|
Catalyzes hydrolytic cleavage of carbon-halogen bonds in halogenated aliphatic compounds, leading to the formation of the corresponding primary alcohols, halide ions and protons. Rhodococcus sp (taxid: 1831) EC: 3 EC: . EC: 8 EC: . EC: 1 EC: . EC: 5 |
| >sp|P0A3G2|DHAA_RHORH Haloalkane dehalogenase OS=Rhodococcus rhodochrous GN=dhaA PE=1 SV=1 | Back alignment and function description |
|---|
Score = 63.5 bits (153), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 73/268 (27%), Positives = 114/268 (42%), Gaps = 33/268 (12%)
Query: 34 RLGT-IVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTENE 92
R GT ++FLHG P+ SY +RN++ ++ + C APD +G G SDKP D D+ ++
Sbjct: 30 RDGTPVLFLHGNPTSSYLWRNIIPHVAPS-HRCIAPDLIGMGKSDKP-----DLDYFFDD 83
Query: 93 FHEELDKLLDVLEVKYPFFLVVQGFLVGSYGLTWALKNPSRISKLAILN--SPLTASSPL 150
LD ++ L ++ LV+ + + G WA +NP R+ +A + P+
Sbjct: 84 HVRYLDAFIEALGLEE-VVLVIHDW-GSALGFHWAKRNPERVKGIACMEFIRPIPTWDEW 141
Query: 151 PGL----FQQLRIPLLGE--FTAQNAIMAERFIEAGSPYV----LKLDKADVYRLPYLAS 200
P FQ R +G QNA FIE P L + D YR P+L
Sbjct: 142 PEFARETFQAFRTADVGRELIIDQNA-----FIEGALPKCVVRPLTEVEMDHYREPFLKP 196
Query: 201 SGPGFALLEAARKVNFKDISSRIGAGFSS-GSW----DKPVLVAWGISDKYLPQSVAEEF 255
L ++ + I A + +W P L+ WG +P + A
Sbjct: 197 VD-REPLWRFPNELPIAGEPANIVALVEAYMNWLHQSPVPKLLFWGTPGVLIPPAEAARL 255
Query: 256 QKGNPNVVKLQMIEGAGHMPQEDWPEKV 283
+ PN + + G H QED P+ +
Sbjct: 256 AESLPNCKTVDIGPGL-HYLQEDNPDLI 282
|
Catalyzes hydrolytic cleavage of carbon-halogen bonds in halogenated aliphatic compounds, leading to the formation of the corresponding primary alcohols, halide ions and protons. Expresses halogenase activity against 1-chloroalkanes of chain length C3 to C10, and also shows a very weak activity with 1,2-dichloroethane. Rhodococcus rhodochrous (taxid: 1829) EC: 3 EC: . EC: 8 EC: . EC: 1 EC: . EC: 5 |
Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 295 | ||||||
| 225442892 | 383 | PREDICTED: haloalkane dehalogenase [Viti | 0.983 | 0.757 | 0.828 | 1e-141 | |
| 224128476 | 338 | predicted protein [Populus trichocarpa] | 0.983 | 0.857 | 0.821 | 1e-139 | |
| 255553259 | 375 | hydrolase, putative [Ricinus communis] g | 0.983 | 0.773 | 0.797 | 1e-135 | |
| 356519288 | 374 | PREDICTED: haloalkane dehalogenase 2-lik | 0.983 | 0.775 | 0.786 | 1e-134 | |
| 356526235 | 376 | PREDICTED: haloalkane dehalogenase 2-lik | 0.986 | 0.773 | 0.780 | 1e-133 | |
| 22330196 | 380 | alpha/beta-hydrolase domain-containing p | 0.983 | 0.763 | 0.766 | 1e-132 | |
| 449436160 | 387 | PREDICTED: haloalkane dehalogenase 1-lik | 0.983 | 0.749 | 0.762 | 1e-132 | |
| 297853002 | 380 | hydrolase, alpha/beta fold family protei | 0.983 | 0.763 | 0.762 | 1e-131 | |
| 51971471 | 380 | unknown protein [Arabidopsis thaliana] | 0.983 | 0.763 | 0.762 | 1e-131 | |
| 79319792 | 288 | alpha/beta-hydrolase domain-containing p | 0.972 | 0.996 | 0.770 | 1e-130 |
| >gi|225442892|ref|XP_002263706.1| PREDICTED: haloalkane dehalogenase [Vitis vinifera] gi|297743495|emb|CBI36362.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 508 bits (1309), Expect = e-141, Method: Compositional matrix adjust.
Identities = 241/291 (82%), Positives = 267/291 (91%), Gaps = 1/291 (0%)
Query: 1 MISRIENKGREYGSYIKSGEYRWFVRETGSADSRLGTIVFLHGAPSHSYSYRNVMSQMSD 60
M+ RIE+KG+EYGSYI+SGE+ WFVRETGS DSR GTI+FLHGAP+ SYSYR VMSQMSD
Sbjct: 94 MLYRIEDKGKEYGSYIRSGEFVWFVRETGSPDSRRGTIIFLHGAPTQSYSYRVVMSQMSD 153
Query: 61 AGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEELDKLLDVLEVKYPFFLVVQGFLVG 120
GFHCFAPDW+GFGFS+KP GY FD+TE EFH+E DKLLDVLEVK PF LVVQGFLVG
Sbjct: 154 VGFHCFAPDWIGFGFSEKPYSGYG-FDYTEKEFHDEFDKLLDVLEVKSPFLLVVQGFLVG 212
Query: 121 SYGLTWALKNPSRISKLAILNSPLTASSPLPGLFQQLRIPLLGEFTAQNAIMAERFIEAG 180
S+GLTWALKNPSRISKLAILNSPLTASSP+PGLFQ+LRIPL GEFT QNA+MAERFIEAG
Sbjct: 213 SFGLTWALKNPSRISKLAILNSPLTASSPVPGLFQKLRIPLYGEFTCQNAVMAERFIEAG 272
Query: 181 SPYVLKLDKADVYRLPYLASSGPGFALLEAARKVNFKDISSRIGAGFSSGSWDKPVLVAW 240
S YVLKL+KADVYRLPYL+SSGPGFALLEAARK NFKDI+S++ AGF+SG WDKP+LVAW
Sbjct: 273 SAYVLKLEKADVYRLPYLSSSGPGFALLEAARKANFKDIASQVAAGFASGRWDKPILVAW 332
Query: 241 GISDKYLPQSVAEEFQKGNPNVVKLQMIEGAGHMPQEDWPEKVVDGLRYFF 291
GISDKYLPQSVAEEFQKGNP+ +KL++IEGAGHMPQEDWPEKVVD LR FF
Sbjct: 333 GISDKYLPQSVAEEFQKGNPDYIKLKLIEGAGHMPQEDWPEKVVDALRAFF 383
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224128476|ref|XP_002329013.1| predicted protein [Populus trichocarpa] gi|222839684|gb|EEE78007.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 499 bits (1286), Expect = e-139, Method: Compositional matrix adjust.
Identities = 239/291 (82%), Positives = 264/291 (90%), Gaps = 1/291 (0%)
Query: 1 MISRIENKGREYGSYIKSGEYRWFVRETGSADSRLGTIVFLHGAPSHSYSYRNVMSQMSD 60
M+ RIE+KG+E GSY+KSGE WFVRETGS DSR GTI+FLHGAP+ SYSYR VMSQMSD
Sbjct: 49 MLYRIEDKGKENGSYVKSGELIWFVRETGSPDSRRGTIIFLHGAPAQSYSYRVVMSQMSD 108
Query: 61 AGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEELDKLLDVLEVKYPFFLVVQGFLVG 120
AGFHCFAPDW+GFGFSDKP+ GY FD+TE EFHE LDKLLDVL VK PFFLVVQGFLVG
Sbjct: 109 AGFHCFAPDWIGFGFSDKPQPGYG-FDYTEKEFHEALDKLLDVLGVKSPFFLVVQGFLVG 167
Query: 121 SYGLTWALKNPSRISKLAILNSPLTASSPLPGLFQQLRIPLLGEFTAQNAIMAERFIEAG 180
SYGLTWALKN S+ISKLAILNSP+T SSP+PGLFQQLRIPL GEFT QNA+MAERFIEAG
Sbjct: 168 SYGLTWALKNKSKISKLAILNSPVTVSSPVPGLFQQLRIPLYGEFTCQNAVMAERFIEAG 227
Query: 181 SPYVLKLDKADVYRLPYLASSGPGFALLEAARKVNFKDISSRIGAGFSSGSWDKPVLVAW 240
SPYVLKL+KADVYRLPYLASSGPGFALLEAARK+NF+DI+S+I GF+S WDKP+L+AW
Sbjct: 228 SPYVLKLEKADVYRLPYLASSGPGFALLEAARKINFRDIASQIADGFASEGWDKPILLAW 287
Query: 241 GISDKYLPQSVAEEFQKGNPNVVKLQMIEGAGHMPQEDWPEKVVDGLRYFF 291
GI+DKYLPQ+VAEEFQKGNPN VKL++IEGAGHMPQEDWPEKVV LR FF
Sbjct: 288 GIADKYLPQAVAEEFQKGNPNAVKLKLIEGAGHMPQEDWPEKVVYALRVFF 338
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255553259|ref|XP_002517672.1| hydrolase, putative [Ricinus communis] gi|223543304|gb|EEF44836.1| hydrolase, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 488 bits (1257), Expect = e-135, Method: Compositional matrix adjust.
Identities = 232/291 (79%), Positives = 262/291 (90%), Gaps = 1/291 (0%)
Query: 1 MISRIENKGREYGSYIKSGEYRWFVRETGSADSRLGTIVFLHGAPSHSYSYRNVMSQMSD 60
M+ RIE+KG+EYGSY+KSG+ WFVRETGS SR GTIVFLHGAP+ SYSYR VMSQMSD
Sbjct: 86 MLYRIEDKGKEYGSYVKSGKLTWFVRETGSPKSRRGTIVFLHGAPTQSYSYRVVMSQMSD 145
Query: 61 AGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEELDKLLDVLEVKYPFFLVVQGFLVG 120
AGFHCFAPDW+GFGFSDKP+ GY F++TE E+HE LD+LL+VL+V+ PFFLVVQGFLVG
Sbjct: 146 AGFHCFAPDWIGFGFSDKPQPGYG-FNYTEKEYHEALDQLLEVLDVQSPFFLVVQGFLVG 204
Query: 121 SYGLTWALKNPSRISKLAILNSPLTASSPLPGLFQQLRIPLLGEFTAQNAIMAERFIEAG 180
SYGLTWALKN S+ISK+AI NSPLT SSP+PGLFQ+LRIPL GEFT+QNAI AERFIEAG
Sbjct: 205 SYGLTWALKNQSKISKIAIFNSPLTVSSPVPGLFQKLRIPLYGEFTSQNAIEAERFIEAG 264
Query: 181 SPYVLKLDKADVYRLPYLASSGPGFALLEAARKVNFKDISSRIGAGFSSGSWDKPVLVAW 240
SPYVLKL+KADVYRLPYLASSGPGFALLEAARK+ KDI S+I GF+S WDKP+L+AW
Sbjct: 265 SPYVLKLEKADVYRLPYLASSGPGFALLEAARKIKIKDILSQITDGFASEKWDKPILLAW 324
Query: 241 GISDKYLPQSVAEEFQKGNPNVVKLQMIEGAGHMPQEDWPEKVVDGLRYFF 291
GISDKYLPQS+AEEFQKGNP+ VKL++IEGAGHMPQEDWPEKVVD LR FF
Sbjct: 325 GISDKYLPQSIAEEFQKGNPDTVKLKLIEGAGHMPQEDWPEKVVDALRVFF 375
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356519288|ref|XP_003528305.1| PREDICTED: haloalkane dehalogenase 2-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 482 bits (1241), Expect = e-134, Method: Compositional matrix adjust.
Identities = 229/291 (78%), Positives = 260/291 (89%), Gaps = 1/291 (0%)
Query: 1 MISRIENKGREYGSYIKSGEYRWFVRETGSADSRLGTIVFLHGAPSHSYSYRNVMSQMSD 60
M+ RIE+KG+EYGSY+KSG+ RWFVRETGSA+ R GTIVFLHGAP+ S+SYR VMSQ+SD
Sbjct: 85 MLYRIEDKGKEYGSYVKSGKLRWFVRETGSANGRRGTIVFLHGAPTQSFSYRVVMSQLSD 144
Query: 61 AGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEELDKLLDVLEVKYPFFLVVQGFLVG 120
AGFHCFAPDW+GFGFSDKP+ GY F++TE EFH+ LDKLL+VL VK PFFLVVQGFLVG
Sbjct: 145 AGFHCFAPDWIGFGFSDKPQPGYG-FNYTEKEFHDALDKLLEVLGVKSPFFLVVQGFLVG 203
Query: 121 SYGLTWALKNPSRISKLAILNSPLTASSPLPGLFQQLRIPLLGEFTAQNAIMAERFIEAG 180
SYGLTWALKN S+ISKLAILNSPLT SSP+PGLFQ+LRIPL GEFT+QNAI+AERFIE G
Sbjct: 204 SYGLTWALKNSSKISKLAILNSPLTDSSPIPGLFQKLRIPLYGEFTSQNAIIAERFIEGG 263
Query: 181 SPYVLKLDKADVYRLPYLASSGPGFALLEAARKVNFKDISSRIGAGFSSGSWDKPVLVAW 240
SPYVLK +KADVYRLPYLASSGPGFALLEAARK NFK S I AGF++ WDKP+L+AW
Sbjct: 264 SPYVLKNEKADVYRLPYLASSGPGFALLEAARKANFKGTFSEISAGFTTERWDKPILLAW 323
Query: 241 GISDKYLPQSVAEEFQKGNPNVVKLQMIEGAGHMPQEDWPEKVVDGLRYFF 291
G+SDKYLPQSVAE+FQKGNP ++L++IEGAGHMPQEDWPEKVVD R FF
Sbjct: 324 GLSDKYLPQSVAEQFQKGNPAQIQLKLIEGAGHMPQEDWPEKVVDAFRMFF 374
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356526235|ref|XP_003531724.1| PREDICTED: haloalkane dehalogenase 2-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 481 bits (1238), Expect = e-133, Method: Compositional matrix adjust.
Identities = 228/292 (78%), Positives = 260/292 (89%), Gaps = 1/292 (0%)
Query: 1 MISRIENKGREYGSYIKSGEYRWFVRETGSADSRLGTIVFLHGAPSHSYSYRNVMSQMSD 60
M+ RIE+KG+EYGSY+KSG+ RWFVRETGSA+ R GTI+FLHGAP+ S+SYR VMSQ+SD
Sbjct: 86 MLYRIEDKGKEYGSYVKSGKLRWFVRETGSANGRRGTIIFLHGAPTQSFSYRVVMSQLSD 145
Query: 61 AGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEELDKLLDVLEVKYPFFLVVQGFLVG 120
AGFHCFAPDW+GFGFSDKP+ GY F++TE EFH+ LDKLL+VL VK PFFLVVQGFLVG
Sbjct: 146 AGFHCFAPDWIGFGFSDKPQPGYG-FNYTEKEFHDALDKLLEVLGVKSPFFLVVQGFLVG 204
Query: 121 SYGLTWALKNPSRISKLAILNSPLTASSPLPGLFQQLRIPLLGEFTAQNAIMAERFIEAG 180
SYGLTWALKN S+ISKLAILNSPLT SSP+PGLFQ+LRIPL GEFT+QNAI+AERFIE G
Sbjct: 205 SYGLTWALKNSSKISKLAILNSPLTDSSPIPGLFQKLRIPLYGEFTSQNAIIAERFIEGG 264
Query: 181 SPYVLKLDKADVYRLPYLASSGPGFALLEAARKVNFKDISSRIGAGFSSGSWDKPVLVAW 240
SPYVLK +KADVYRLPYLASSGPGFALLEAARK NFK S I AGF++ WDKP+L+AW
Sbjct: 265 SPYVLKNEKADVYRLPYLASSGPGFALLEAARKANFKGTFSEIAAGFATDRWDKPILLAW 324
Query: 241 GISDKYLPQSVAEEFQKGNPNVVKLQMIEGAGHMPQEDWPEKVVDGLRYFFL 292
G+SDKYLPQSVAE+FQKGNP ++L++IEGAGHMPQEDWPEKVVD R FF
Sbjct: 325 GLSDKYLPQSVAEQFQKGNPAQIQLKLIEGAGHMPQEDWPEKVVDTFRVFFF 376
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|22330196|ref|NP_175660.2| alpha/beta-hydrolase domain-containing protein [Arabidopsis thaliana] gi|17528996|gb|AAL38708.1| unknown protein [Arabidopsis thaliana] gi|21436161|gb|AAM51368.1| unknown protein [Arabidopsis thaliana] gi|51968998|dbj|BAD43191.1| unknown protein [Arabidopsis thaliana] gi|51971086|dbj|BAD44235.1| unknown protein [Arabidopsis thaliana] gi|332194695|gb|AEE32816.1| alpha/beta-hydrolase domain-containing protein [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 476 bits (1226), Expect = e-132, Method: Compositional matrix adjust.
Identities = 223/291 (76%), Positives = 256/291 (87%), Gaps = 1/291 (0%)
Query: 1 MISRIENKGREYGSYIKSGEYRWFVRETGSADSRLGTIVFLHGAPSHSYSYRNVMSQMSD 60
M+ R E+KG+EYGS IKSG+ RWFVRETGS +SR GTIVF+HGAP+ S+SYR VMS++SD
Sbjct: 91 MLYRTEDKGKEYGSTIKSGKLRWFVRETGSKESRRGTIVFVHGAPTQSFSYRTVMSELSD 150
Query: 61 AGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEELDKLLDVLEVKYPFFLVVQGFLVG 120
AGFHCFAPDW+GFGFSDKP+ GY F++TE E+HE DKLL+VLEVK PFFLVVQGFLVG
Sbjct: 151 AGFHCFAPDWIGFGFSDKPQPGYG-FNYTEKEYHEAFDKLLEVLEVKSPFFLVVQGFLVG 209
Query: 121 SYGLTWALKNPSRISKLAILNSPLTASSPLPGLFQQLRIPLLGEFTAQNAIMAERFIEAG 180
SYGLTWALKNPS++ KLAILNSPLT SSP+PGLF+QLRIPL GEFT QNAI+AERFIE G
Sbjct: 210 SYGLTWALKNPSKVEKLAILNSPLTVSSPVPGLFKQLRIPLFGEFTCQNAILAERFIEGG 269
Query: 181 SPYVLKLDKADVYRLPYLASSGPGFALLEAARKVNFKDISSRIGAGFSSGSWDKPVLVAW 240
SPYVLK +KADVYRLPYL+S GPGFALLE A+K+NF D S+I GFSSGSWDKP L+AW
Sbjct: 270 SPYVLKNEKADVYRLPYLSSGGPGFALLETAKKINFGDTLSQIANGFSSGSWDKPTLLAW 329
Query: 241 GISDKYLPQSVAEEFQKGNPNVVKLQMIEGAGHMPQEDWPEKVVDGLRYFF 291
GI+DKYLPQS+AEEF+K NP VKL++IEGAGH+PQEDWPEKVV LR FF
Sbjct: 330 GIADKYLPQSIAEEFEKQNPQNVKLRLIEGAGHLPQEDWPEKVVAALRAFF 380
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449436160|ref|XP_004135862.1| PREDICTED: haloalkane dehalogenase 1-like [Cucumis sativus] gi|449491053|ref|XP_004158785.1| PREDICTED: haloalkane dehalogenase 1-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 475 bits (1223), Expect = e-132, Method: Compositional matrix adjust.
Identities = 222/291 (76%), Positives = 256/291 (87%), Gaps = 1/291 (0%)
Query: 1 MISRIENKGREYGSYIKSGEYRWFVRETGSADSRLGTIVFLHGAPSHSYSYRNVMSQMSD 60
M+ RIE+KG+EYGSY+K+G++RWFVRETGSA SR GTIVFLHGAP+ SYSYR VMS++S
Sbjct: 98 MLYRIEDKGKEYGSYVKAGKFRWFVRETGSAKSRRGTIVFLHGAPTQSYSYRVVMSELSA 157
Query: 61 AGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEELDKLLDVLEVKYPFFLVVQGFLVG 120
GFHCFAPDW+GFGFSDKP+ GY F++TE E+HE LDKLLD+L + PF LV+QGFLVG
Sbjct: 158 FGFHCFAPDWIGFGFSDKPQPGYG-FNYTEKEYHEALDKLLDMLGINTPFNLVIQGFLVG 216
Query: 121 SYGLTWALKNPSRISKLAILNSPLTASSPLPGLFQQLRIPLLGEFTAQNAIMAERFIEAG 180
SYGLTWALKN SRISK++ILN+PLT SSP+PGLFQQLRIPL GEFT QNA+MAERFIEAG
Sbjct: 217 SYGLTWALKNQSRISKISILNTPLTVSSPVPGLFQQLRIPLFGEFTCQNAVMAERFIEAG 276
Query: 181 SPYVLKLDKADVYRLPYLASSGPGFALLEAARKVNFKDISSRIGAGFSSGSWDKPVLVAW 240
S YVLKL+KADVYRLPYL+S GPGFALLEAARK NF DI SRI AGF+SG WDKP LV W
Sbjct: 277 SAYVLKLEKADVYRLPYLSSGGPGFALLEAARKANFNDILSRITAGFASGRWDKPSLVLW 336
Query: 241 GISDKYLPQSVAEEFQKGNPNVVKLQMIEGAGHMPQEDWPEKVVDGLRYFF 291
G+SDKYLPQS+AEEFQK N ++L++IEGAGHMPQEDWPEKV++ LR FF
Sbjct: 337 GLSDKYLPQSIAEEFQKQNSTTIQLKLIEGAGHMPQEDWPEKVIEALRSFF 387
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|297853002|ref|XP_002894382.1| hydrolase, alpha/beta fold family protein [Arabidopsis lyrata subsp. lyrata] gi|297340224|gb|EFH70641.1| hydrolase, alpha/beta fold family protein [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
|---|
Score = 473 bits (1217), Expect = e-131, Method: Compositional matrix adjust.
Identities = 222/291 (76%), Positives = 255/291 (87%), Gaps = 1/291 (0%)
Query: 1 MISRIENKGREYGSYIKSGEYRWFVRETGSADSRLGTIVFLHGAPSHSYSYRNVMSQMSD 60
M+ R E+KG+EYGS IKSG+ RWFVRETGS +SR GTIVF+HGAP+ S+SYR VMS+MSD
Sbjct: 91 MLYRTEDKGKEYGSIIKSGKLRWFVRETGSKESRRGTIVFVHGAPTQSFSYRTVMSEMSD 150
Query: 61 AGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEELDKLLDVLEVKYPFFLVVQGFLVG 120
AGFHCFAPDW+GFGFSDKP+ GY F++TE E+HE DKLL+VLEVK PFFLVVQGFLVG
Sbjct: 151 AGFHCFAPDWIGFGFSDKPQPGYG-FNYTEKEYHEAFDKLLEVLEVKSPFFLVVQGFLVG 209
Query: 121 SYGLTWALKNPSRISKLAILNSPLTASSPLPGLFQQLRIPLLGEFTAQNAIMAERFIEAG 180
SYGLTWALKNPS++ K+AILNSPLT SSP+PGLF+QLRIPL GEFT QNAI+AERFIE G
Sbjct: 210 SYGLTWALKNPSKVEKIAILNSPLTVSSPVPGLFKQLRIPLFGEFTCQNAILAERFIEGG 269
Query: 181 SPYVLKLDKADVYRLPYLASSGPGFALLEAARKVNFKDISSRIGAGFSSGSWDKPVLVAW 240
SPYVLK +KADVYRLPYL+S GPGFALLE A+K+NF D S+I GFSS SWDKP L+AW
Sbjct: 270 SPYVLKNEKADVYRLPYLSSGGPGFALLETAKKINFGDTLSQIANGFSSDSWDKPTLLAW 329
Query: 241 GISDKYLPQSVAEEFQKGNPNVVKLQMIEGAGHMPQEDWPEKVVDGLRYFF 291
GI+DKYLPQS+AEEF+K NP VKL++IEGAGH+PQEDWPEKVV LR FF
Sbjct: 330 GIADKYLPQSIAEEFEKLNPQNVKLRLIEGAGHLPQEDWPEKVVAALRAFF 380
|
Source: Arabidopsis lyrata subsp. lyrata Species: Arabidopsis lyrata Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|51971471|dbj|BAD44400.1| unknown protein [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 473 bits (1217), Expect = e-131, Method: Compositional matrix adjust.
Identities = 222/291 (76%), Positives = 255/291 (87%), Gaps = 1/291 (0%)
Query: 1 MISRIENKGREYGSYIKSGEYRWFVRETGSADSRLGTIVFLHGAPSHSYSYRNVMSQMSD 60
M+ E+KG+EYGS IKSG+ RWFVRETGS +SR GTIVF+HGAP+ S+SYR VMS++SD
Sbjct: 91 MLYGTEDKGKEYGSTIKSGKLRWFVRETGSKESRRGTIVFVHGAPTQSFSYRTVMSELSD 150
Query: 61 AGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEELDKLLDVLEVKYPFFLVVQGFLVG 120
AGFHCFAPDW+GFGFSDKP+ GY F++TE E+HE DKLL+VLEVK PFFLVVQGFLVG
Sbjct: 151 AGFHCFAPDWIGFGFSDKPQPGYG-FNYTEKEYHEAFDKLLEVLEVKSPFFLVVQGFLVG 209
Query: 121 SYGLTWALKNPSRISKLAILNSPLTASSPLPGLFQQLRIPLLGEFTAQNAIMAERFIEAG 180
SYGLTWALKNPS++ KLAILNSPLT SSP+PGLF+QLRIPL GEFT QNAI+AERFIE G
Sbjct: 210 SYGLTWALKNPSKVEKLAILNSPLTVSSPVPGLFKQLRIPLFGEFTCQNAILAERFIEGG 269
Query: 181 SPYVLKLDKADVYRLPYLASSGPGFALLEAARKVNFKDISSRIGAGFSSGSWDKPVLVAW 240
SPYVLK +KADVYRLPYL+S GPGFALLE A+K+NF D S+I GFSSGSWDKP L+AW
Sbjct: 270 SPYVLKNEKADVYRLPYLSSGGPGFALLETAKKINFGDTLSQIANGFSSGSWDKPTLLAW 329
Query: 241 GISDKYLPQSVAEEFQKGNPNVVKLQMIEGAGHMPQEDWPEKVVDGLRYFF 291
GI+DKYLPQS+AEEF+K NP VKL++IEGAGH+PQEDWPEKVV LR FF
Sbjct: 330 GIADKYLPQSIAEEFEKQNPQNVKLRLIEGAGHLPQEDWPEKVVAALRAFF 380
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|79319792|ref|NP_001031176.1| alpha/beta-hydrolase domain-containing protein [Arabidopsis thaliana] gi|332194696|gb|AEE32817.1| alpha/beta-hydrolase domain-containing protein [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 471 bits (1213), Expect = e-130, Method: Compositional matrix adjust.
Identities = 222/288 (77%), Positives = 254/288 (88%), Gaps = 1/288 (0%)
Query: 4 RIENKGREYGSYIKSGEYRWFVRETGSADSRLGTIVFLHGAPSHSYSYRNVMSQMSDAGF 63
R E+KG+EYGS IKSG+ RWFVRETGS +SR GTIVF+HGAP+ S+SYR VMS++SDAGF
Sbjct: 2 RTEDKGKEYGSTIKSGKLRWFVRETGSKESRRGTIVFVHGAPTQSFSYRTVMSELSDAGF 61
Query: 64 HCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEELDKLLDVLEVKYPFFLVVQGFLVGSYG 123
HCFAPDW+GFGFSDKP+ GY F++TE E+HE DKLL+VLEVK PFFLVVQGFLVGSYG
Sbjct: 62 HCFAPDWIGFGFSDKPQPGYG-FNYTEKEYHEAFDKLLEVLEVKSPFFLVVQGFLVGSYG 120
Query: 124 LTWALKNPSRISKLAILNSPLTASSPLPGLFQQLRIPLLGEFTAQNAIMAERFIEAGSPY 183
LTWALKNPS++ KLAILNSPLT SSP+PGLF+QLRIPL GEFT QNAI+AERFIE GSPY
Sbjct: 121 LTWALKNPSKVEKLAILNSPLTVSSPVPGLFKQLRIPLFGEFTCQNAILAERFIEGGSPY 180
Query: 184 VLKLDKADVYRLPYLASSGPGFALLEAARKVNFKDISSRIGAGFSSGSWDKPVLVAWGIS 243
VLK +KADVYRLPYL+S GPGFALLE A+K+NF D S+I GFSSGSWDKP L+AWGI+
Sbjct: 181 VLKNEKADVYRLPYLSSGGPGFALLETAKKINFGDTLSQIANGFSSGSWDKPTLLAWGIA 240
Query: 244 DKYLPQSVAEEFQKGNPNVVKLQMIEGAGHMPQEDWPEKVVDGLRYFF 291
DKYLPQS+AEEF+K NP VKL++IEGAGH+PQEDWPEKVV LR FF
Sbjct: 241 DKYLPQSIAEEFEKQNPQNVKLRLIEGAGHLPQEDWPEKVVAALRAFF 288
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 295 | ||||||
| TAIR|locus:2035169 | 380 | AT1G52510 [Arabidopsis thalian | 0.983 | 0.763 | 0.731 | 3.8e-117 | |
| TAIR|locus:2135843 | 393 | AT4G12830 [Arabidopsis thalian | 0.861 | 0.646 | 0.361 | 1.9e-35 | |
| TIGR_CMR|CPS_2154 | 308 | CPS_2154 "hydrolase, alpha/bet | 0.823 | 0.788 | 0.262 | 2.4e-12 | |
| UNIPROTKB|Q8EG65 | 318 | oleB "Polyolefin biosynthetic | 0.827 | 0.767 | 0.259 | 3e-11 | |
| TIGR_CMR|SO_1743 | 318 | SO_1743 "hydrolase, alpha/beta | 0.827 | 0.767 | 0.259 | 3e-11 | |
| UNIPROTKB|Q83CA3 | 302 | CBU_1225 "1,3,4,6-tetrachloro- | 0.850 | 0.831 | 0.265 | 5.8e-10 | |
| TIGR_CMR|CBU_1225 | 302 | CBU_1225 "hydrolase, alpha/bet | 0.850 | 0.831 | 0.265 | 5.8e-10 | |
| UNIPROTKB|P64301 | 300 | dhmA1 "Haloalkane dehalogenase | 0.664 | 0.653 | 0.302 | 7.5e-10 | |
| UNIPROTKB|P64303 | 286 | dhmA2 "Haloalkane dehalogenase | 0.861 | 0.888 | 0.234 | 1e-08 | |
| SGD|S000005347 | 290 | YNR064C "Epoxide hydrolase" [S | 0.820 | 0.834 | 0.274 | 1.1e-08 |
| TAIR|locus:2035169 AT1G52510 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1154 (411.3 bits), Expect = 3.8e-117, P = 3.8e-117
Identities = 213/291 (73%), Positives = 245/291 (84%)
Query: 1 MISRIENKGREYGSYIKSGEYRWFVRETGSADSRLGTIVFLHGAPSHSYSYRNVMSQMSD 60
M+ R E+KG+EYGS IKSG+ RWFVRETGS +SR GTIVF+HGAP+ S+SYR VMS++SD
Sbjct: 91 MLYRTEDKGKEYGSTIKSGKLRWFVRETGSKESRRGTIVFVHGAPTQSFSYRTVMSELSD 150
Query: 61 AGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHXXXXXXXXXXXXXYPFFLVVQGFLVG 120
AGFHCFAPDW+GFGFSDKP+ GY F++TE E+H PFFLVVQGFLVG
Sbjct: 151 AGFHCFAPDWIGFGFSDKPQPGYG-FNYTEKEYHEAFDKLLEVLEVKSPFFLVVQGFLVG 209
Query: 121 SYGLTWALKNPSRISKLAILNSPLTASSPLPGLFQQLRIPLLGEFTAQNAIMAERFIEAG 180
SYGLTWALKNPS++ KLAILNSPLT SSP+PGLF+QLRIPL GEFT QNAI+AERFIE G
Sbjct: 210 SYGLTWALKNPSKVEKLAILNSPLTVSSPVPGLFKQLRIPLFGEFTCQNAILAERFIEGG 269
Query: 181 SPYVLKLDKADVYRLPYLASSGPGFALLEAARKVNFKDISSRIGAGFSSGSWDKPVLVAW 240
SPYVLK +KADVYRLPYL+S GPGFALLE A+K+NF D S+I GFSSGSWDKP L+AW
Sbjct: 270 SPYVLKNEKADVYRLPYLSSGGPGFALLETAKKINFGDTLSQIANGFSSGSWDKPTLLAW 329
Query: 241 GISDKYLPQSVAEEFQKGNPNVVKLQMIEGAGHMPQEDWPEKVVDGLRYFF 291
GI+DKYLPQS+AEEF+K NP VKL++IEGAGH+PQEDWPEKVV LR FF
Sbjct: 330 GIADKYLPQSIAEEFEKQNPQNVKLRLIEGAGHLPQEDWPEKVVAALRAFF 380
|
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| TAIR|locus:2135843 AT4G12830 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 383 (139.9 bits), Expect = 1.9e-35, P = 1.9e-35
Identities = 97/268 (36%), Positives = 137/268 (51%)
Query: 21 YRWFVRETGSADSRLGTIVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGFGFSDKPE 80
+RWF E+GS DS ++ +HG PS +YSYR + +S + A DWLGFGFSDKP+
Sbjct: 121 FRWFSVESGSVDSP--PVILIHGFPSQAYSYRKTIPVLSK-NYRAIAFDWLGFGFSDKPQ 177
Query: 81 KGYDDFDFTENEFHXXXXXXXXXXXXXYPFFLVVQGFLVGSYGLTWALKNPSRISKLAIL 140
GY F++T +EF LVVQG+ + + +A P +I L +L
Sbjct: 178 AGYG-FNYTMDEFVSSLESFIDEVTTS-KVSLVVQGYFSAAV-VKYARNRPDKIKNLILL 234
Query: 141 NSPLTAS-SPLPGLFQQLRIPLLGEFTAQNAIMA-ERFIEAGSPYVLKLDKADVYRLPYL 198
N PLT + LP LLGE +Q+ + A ++ + + PY +K D A VYR PYL
Sbjct: 235 NPPLTPEHAKLPSTLSVFSNFLLGEIFSQDPLRASDKPLTSCGPYKMKEDDAMVYRRPYL 294
Query: 199 ASSGPGFALLEAAR--KVNFKDISSRIGAGFSSGSWDKPVLVAWGISDKYLPQSVAEEFQ 256
S GFAL +R K K + + +W P+ V WG D++L EEF
Sbjct: 295 TSGSSGFALNAISRSMKKELKKYAEEMRTSLMDKNWKIPITVCWGQRDRWLSYEGVEEFC 354
Query: 257 KGNP-NVVKLQMIEGAGHMPQEDWPEKV 283
K + N+V+L AGH QED E++
Sbjct: 355 KSSGHNLVELP---NAGHHVQEDCGEEL 379
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| TIGR_CMR|CPS_2154 CPS_2154 "hydrolase, alpha/beta hydrolase fold family" [Colwellia psychrerythraea 34H (taxid:167879)] | Back alignment and assigned GO terms |
|---|
Score = 182 (69.1 bits), Expect = 2.4e-12, P = 2.4e-12
Identities = 70/267 (26%), Positives = 121/267 (45%)
Query: 38 IVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHXXX 97
+V +HG PS S+ YRN++SQ+S + C PD +G G SDKP+ D +D+T
Sbjct: 43 VVMVHGNPSWSFYYRNLVSQLSKS-HQCIVPDHIGCGLSDKPDD--DGYDYTLANRIDDL 99
Query: 98 XXXXXXXXXXYPFFLVVQGFLVGSYGLTWALKNPSRISKLAILNSPLTASSPLPGLFQQL 157
LVV + G G+ +A ++P RI +L ILN T + LP ++L
Sbjct: 100 EALLEHLDVKENITLVVHDW-GGMIGMGYAARHPERIKRLVILN---TGAFHLPKA-KKL 154
Query: 158 RIPL-LGEFTAQNAIMAERF--IEAGSPYV------LKLDKADVYRLPYLASSGPGFALL 208
L LG T A + F + + Y+ + + + Y P+ + + + L
Sbjct: 155 PPALWLGRNTFVGAALVRGFNAFSSVASYIGVKRKPMSKEVREAYVAPFNSWTNR-ISTL 213
Query: 209 EAARKVNFK--DISSRIGAGFSSG--SWDK-PVLVAWGISDKYLPQSVAEEFQKGNPNVV 263
+ + K D + ++ + S + K P+L+ WG+ D + +E+Q P+
Sbjct: 214 RFIQDIPLKIGDRNYQLVSDISDNLAQFKKIPMLICWGLKDFVFDRHFLDEWQHRFPDA- 272
Query: 264 KLQMIEGAGHMPQEDWPEKVVDGLRYF 290
++ + GH ED ++VV + F
Sbjct: 273 QVHAFDDCGHYILEDASDEVVPLIENF 299
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| UNIPROTKB|Q8EG65 oleB "Polyolefin biosynthetic pathway thioesterase OleB" [Shewanella oneidensis MR-1 (taxid:211586)] | Back alignment and assigned GO terms |
|---|
Score = 174 (66.3 bits), Expect = 3.0e-11, P = 3.0e-11
Identities = 69/266 (25%), Positives = 114/266 (42%)
Query: 38 IVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGFGFSDKPE-KGYDDFDFTENEFHXX 96
+V +HG PS S+ YRN++S + D C PD +G G SDKP+ GYD +T
Sbjct: 31 VVMVHGNPSWSFYYRNLVSALKDT-HQCIVPDHIGCGLSDKPDDSGYD---YTLKNRIDD 86
Query: 97 XXXXXXXXXXXYPFFLVVQGFLVGSYGLTWALKNPSRISKLAILNSP---LTASSPLPGL 153
LVV + G G+ +A + P RI +L ILN+ L + PLP
Sbjct: 87 LEALLDSLNVKENITLVVHDW-GGMIGMGYAARYPERIKRLVILNTGAFHLPDTKPLPLA 145
Query: 154 FQQLRIPLLGEFTAQNAIMAERFIEAGSPYVLKLDKADVY-RLPYLA---SSGPGFALLE 209
R LLG + F S +K Y R Y+A S + L
Sbjct: 146 LWICRNTLLGTVLVRGF---NAFSSIASYVGVKRQPMSKYIREAYVAPFNSWANRISTLR 202
Query: 210 AARKVNFK--DISSRIGAGFSSG--SWDK-PVLVAWGISDKYLPQSVAEEFQKGNPNVVK 264
+ + K D + ++ + ++ + K P L+ WG+ D + ++++ P+ +
Sbjct: 203 FVQDIPLKPGDRNYQLVSDIAASLPKFAKVPTLICWGLQDFVFDKHFLVKWREHMPHA-Q 261
Query: 265 LQMIEGAGHMPQEDWPEKVVDGLRYF 290
+ GH ED ++V+ +++F
Sbjct: 262 VHEFADCGHYILEDASDEVITHIKHF 287
|
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| TIGR_CMR|SO_1743 SO_1743 "hydrolase, alpha/beta hydrolase fold family" [Shewanella oneidensis MR-1 (taxid:211586)] | Back alignment and assigned GO terms |
|---|
Score = 174 (66.3 bits), Expect = 3.0e-11, P = 3.0e-11
Identities = 69/266 (25%), Positives = 114/266 (42%)
Query: 38 IVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGFGFSDKPE-KGYDDFDFTENEFHXX 96
+V +HG PS S+ YRN++S + D C PD +G G SDKP+ GYD +T
Sbjct: 31 VVMVHGNPSWSFYYRNLVSALKDT-HQCIVPDHIGCGLSDKPDDSGYD---YTLKNRIDD 86
Query: 97 XXXXXXXXXXXYPFFLVVQGFLVGSYGLTWALKNPSRISKLAILNSP---LTASSPLPGL 153
LVV + G G+ +A + P RI +L ILN+ L + PLP
Sbjct: 87 LEALLDSLNVKENITLVVHDW-GGMIGMGYAARYPERIKRLVILNTGAFHLPDTKPLPLA 145
Query: 154 FQQLRIPLLGEFTAQNAIMAERFIEAGSPYVLKLDKADVY-RLPYLA---SSGPGFALLE 209
R LLG + F S +K Y R Y+A S + L
Sbjct: 146 LWICRNTLLGTVLVRGF---NAFSSIASYVGVKRQPMSKYIREAYVAPFNSWANRISTLR 202
Query: 210 AARKVNFK--DISSRIGAGFSSG--SWDK-PVLVAWGISDKYLPQSVAEEFQKGNPNVVK 264
+ + K D + ++ + ++ + K P L+ WG+ D + ++++ P+ +
Sbjct: 203 FVQDIPLKPGDRNYQLVSDIAASLPKFAKVPTLICWGLQDFVFDKHFLVKWREHMPHA-Q 261
Query: 265 LQMIEGAGHMPQEDWPEKVVDGLRYF 290
+ GH ED ++V+ +++F
Sbjct: 262 VHEFADCGHYILEDASDEVITHIKHF 287
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| UNIPROTKB|Q83CA3 CBU_1225 "1,3,4,6-tetrachloro-1,4-cyclohexadiene hydrolase" [Coxiella burnetii RSA 493 (taxid:227377)] | Back alignment and assigned GO terms |
|---|
Score = 163 (62.4 bits), Expect = 5.8e-10, P = 5.8e-10
Identities = 75/282 (26%), Positives = 122/282 (43%)
Query: 27 ETGSADSRLGTIVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDF 86
ETG + ++F+HG P+ SY +RN++ +++D HC A D +G G SDKP D
Sbjct: 29 ETGQGEP----VLFIHGMPTSSYLWRNIIPKLADKA-HCVALDLIGMGESDKP-----DI 78
Query: 87 DFTENEFHXXXXXXXXXXXXXYPFFLVVQGFLVGSY-GLTWALKNPSRISKLAILNS--- 142
D+T N+ H LV+ G+ GS G +A ++P I LA S
Sbjct: 79 DYTVND-HISYVECFIEALGLRNITLVMHGW--GSVIGFDYARRHPKNIKALAFFESHIR 135
Query: 143 PLTASSPLPGLFQQLRIPLLGEFTAQNAIMAERF-IEAGSPYVL--KLDKADV--YRLPY 197
P T L QQL L + AI+ + + I P + KL ++ YR P+
Sbjct: 136 PTTDWDMLSLPVQQLATLLHRPGASYRAIVEQNYLINKLLPASMMRKLSDEEMANYRRPF 195
Query: 198 LA--SSGPGFALLEAARKVNFKDISSRIGAGFSSGSWDK----PVLVAWGISDKYLPQSV 251
L S P + L+ + K + +S W K P L+ + + +
Sbjct: 196 LTKESRKPLWQYLQDLPLGDSKRPVVTLIKNYSQ--WLKQAPQPKLMMYAVPGFVTTMAT 253
Query: 252 AEEFQKGNPNVVKLQMIEGAGHMPQEDWPEKVVDGLRYFFLN 293
+ ++ PN+ ++ + H QE P+ + LR ++LN
Sbjct: 254 VQWAKEHLPNLTLVEFSDVL-HFAQESIPDIFSEELRKWYLN 294
|
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| TIGR_CMR|CBU_1225 CBU_1225 "hydrolase, alpha/beta hydrolase fold family" [Coxiella burnetii RSA 493 (taxid:227377)] | Back alignment and assigned GO terms |
|---|
Score = 163 (62.4 bits), Expect = 5.8e-10, P = 5.8e-10
Identities = 75/282 (26%), Positives = 122/282 (43%)
Query: 27 ETGSADSRLGTIVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDF 86
ETG + ++F+HG P+ SY +RN++ +++D HC A D +G G SDKP D
Sbjct: 29 ETGQGEP----VLFIHGMPTSSYLWRNIIPKLADKA-HCVALDLIGMGESDKP-----DI 78
Query: 87 DFTENEFHXXXXXXXXXXXXXYPFFLVVQGFLVGSY-GLTWALKNPSRISKLAILNS--- 142
D+T N+ H LV+ G+ GS G +A ++P I LA S
Sbjct: 79 DYTVND-HISYVECFIEALGLRNITLVMHGW--GSVIGFDYARRHPKNIKALAFFESHIR 135
Query: 143 PLTASSPLPGLFQQLRIPLLGEFTAQNAIMAERF-IEAGSPYVL--KLDKADV--YRLPY 197
P T L QQL L + AI+ + + I P + KL ++ YR P+
Sbjct: 136 PTTDWDMLSLPVQQLATLLHRPGASYRAIVEQNYLINKLLPASMMRKLSDEEMANYRRPF 195
Query: 198 LA--SSGPGFALLEAARKVNFKDISSRIGAGFSSGSWDK----PVLVAWGISDKYLPQSV 251
L S P + L+ + K + +S W K P L+ + + +
Sbjct: 196 LTKESRKPLWQYLQDLPLGDSKRPVVTLIKNYSQ--WLKQAPQPKLMMYAVPGFVTTMAT 253
Query: 252 AEEFQKGNPNVVKLQMIEGAGHMPQEDWPEKVVDGLRYFFLN 293
+ ++ PN+ ++ + H QE P+ + LR ++LN
Sbjct: 254 VQWAKEHLPNLTLVEFSDVL-HFAQESIPDIFSEELRKWYLN 294
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| UNIPROTKB|P64301 dhmA1 "Haloalkane dehalogenase 1" [Mycobacterium tuberculosis (taxid:1773)] | Back alignment and assigned GO terms |
|---|
Score = 162 (62.1 bits), Expect = 7.5e-10, P = 7.5e-10
Identities = 68/225 (30%), Positives = 97/225 (43%)
Query: 38 IVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHXXX 97
IV LHG P+ SY YR ++ +S AG APD +GFG SDKP + +D+ + H
Sbjct: 49 IVLLHGEPTWSYLYRTMIPPLSAAGHRVLAPDLIGFGRSDKPTR-IEDYTYLR---HVEW 104
Query: 98 XXXXXXXXXXYPFFLVVQGFLVGSY-GLTWALKNPSRISKLAILNSPLTAS---SPLPGL 153
+ L VQ + GS GL A ++ RI++L + N L A+ +PLP
Sbjct: 105 VTSWFENLDLHDVTLFVQDW--GSLIGLRIAAEHGDRIARLVVANGFLPAAQGRTPLPFY 162
Query: 154 FQQL--RI-PLLGEFTAQNAIMAERF---IEAG--SPYVLKLDKADVYRLPYLASSGPGF 205
+ R P+L N R + AG +P+ K +A P L + P
Sbjct: 163 VWRAFARYSPVLPAGRLVNFGTVHRVPAGVRAGYDAPFPDKTYQAGARAFPRLVPTSPDD 222
Query: 206 ALLEAARKVNFKDISSRIGAGFSSGSWDKPVLVAWGISDKYLPQS 250
+ A R A + G WDKP L +G D L Q+
Sbjct: 223 PAVPANR-----------AAWEALGRWDKPFLAIFGYRDPILGQA 256
|
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| UNIPROTKB|P64303 dhmA2 "Haloalkane dehalogenase 2" [Mycobacterium tuberculosis (taxid:1773)] | Back alignment and assigned GO terms |
|---|
Score = 152 (58.6 bits), Expect = 1.0e-08, P = 1.0e-08
Identities = 64/273 (23%), Positives = 117/273 (42%)
Query: 20 EYRWFVRETGS---ADSRLGTIVFL-HGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGFGF 75
E RWF G D G + L HG P+ S+ YR+++ + D F C APD+LGFG
Sbjct: 15 ESRWFDSSRGRIHYVDEGTGPPILLCHGNPTWSFLYRDIIVALRDR-FRCVAPDYLGFGL 73
Query: 76 SDKPEKGYDDFDFTENEFHXXXXXXXXXXXXXYPFFLVVQGFLVGSYGLTWALKNPSRIS 135
S++P F + +E H + + Q + G + A++ R+
Sbjct: 74 SERPS----GFGYQIDE-HARVIGEFVDHLGLDRYLSMGQDW-GGPISMAVAVERADRVR 127
Query: 136 KLAILNSPLTASSPLP-GLFQQ-LRIPLLGEFTAQNAIMAERFIEAGSPYVLKLDKADVY 193
+ + N+ + L F + + P + + ER I AG+ + Y
Sbjct: 128 GVVLGNTWFWPADTLAMKAFSRVMSSPPVQYAILRRNFFVERLIPAGTEHRPSSAVMAHY 187
Query: 194 R-LPYLASSGPGFALLEAARKV-NFKDISSRIGAGFSSGSWDKPVLVAWGISD-KYLPQS 250
R + A++ G A E +++ + + +R+ + KP L+ WG+ D + P++
Sbjct: 188 RAVQPNAAARRGVA--EMPKQILAARPLLARLAREVPATLGTKPTLLIWGMKDVAFRPKT 245
Query: 251 VAEEFQKGNPNVVKLQMIEGAGHMPQEDWPEKV 283
+ P+ V +++ A H QED P+++
Sbjct: 246 IIPRLSATFPDHVLVEL-PNAKHFIQEDAPDRI 277
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| SGD|S000005347 YNR064C "Epoxide hydrolase" [Saccharomyces cerevisiae (taxid:4932)] | Back alignment and assigned GO terms |
|---|
Score = 152 (58.6 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 77/281 (27%), Positives = 127/281 (45%)
Query: 16 IKSGEYRWFVRETGSADSRLGTIVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGFGF 75
++ G W+ RE G+A + TI+ LHG P+ S +RN++ ++ FH APD GFGF
Sbjct: 13 VQDGVKVWY-REAGAAGNP--TILLLHGFPTSSNMFRNLIPLLAGQ-FHIIAPDLPGFGF 68
Query: 76 SDKPEKGYDDFDFTENEFHXXXXXXXXXXXXXYPFFLVVQGFLVGSYGLTWALKNPSRIS 135
++ PE Y F F ++ + ++ G VG + L ALK PSRI+
Sbjct: 69 TETPEN-YK-FSF-DSLCESIGYLLDTLSIEKFAMYIFDYGSPVG-FRL--ALKFPSRIT 122
Query: 136 KLAILNSPLTASSPLPGLFQQLRIPLLGEFTAQNAIMAERFIEAGSPYVLKLDKADV--- 192
+ N ++ GL + PL + + + F+++ PY+ D A+V
Sbjct: 123 GIVTQNG----NAYEEGLDDRFWGPLKEYWKSYQSDPV--FVKSLIPYLE--DPANVICQ 174
Query: 193 YR--LPYLASSGPGFALLEAA--RKVNFKDISSRIGAGFSSG-----SWDK-------PV 236
Y +P + S P L+ A ++ DI R+ + + ++ K PV
Sbjct: 175 YHDGVPAIESVDPAAYTLDIALIQRTGQTDIQLRLFFDYQNNIKLYPAFQKFLRDSKIPV 234
Query: 237 LVAWGISDKYLPQSVAEEFQKGNPNVVKLQMIEGAGHMPQE 277
LVAWG +D + AE ++K N+ K+ + GH E
Sbjct: 235 LVAWGANDTIFSVAGAEAYRKDVDNL-KVVYYD-TGHFALE 273
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Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
No confident hit for EC number transfering in SWISSPROT detected by BLAST
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
No EC number assignment, probably not an enzyme!
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
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 | GSVIVG00000283001 | SubName- Full=Chromosome chr9 scaffold_104, whole genome shotgun sequence; (383 aa) | |||||||||
(Vitis vinifera) | |||||||||||
Predicted Functional Partners: | |||||||||||
 | GSVIVG00003851001 | SubName- Full=Chromosome chr8 scaffold_150, whole genome shotgun sequence; (518 aa) | • | 0.408 | |||||||
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 295 | |||
| PLN03084 | 383 | PLN03084, PLN03084, alpha/beta hydrolase fold prot | 7e-49 | |
| pfam12697 | 187 | pfam12697, Abhydrolase_6, Alpha/beta hydrolase fam | 1e-23 | |
| PRK03592 | 295 | PRK03592, PRK03592, haloalkane dehalogenase; Provi | 7e-23 | |
| COG0596 | 282 | COG0596, MhpC, Predicted hydrolases or acyltransfe | 2e-22 | |
| pfam00561 | 226 | pfam00561, Abhydrolase_1, alpha/beta hydrolase fol | 3e-19 | |
| PRK00870 | 302 | PRK00870, PRK00870, haloalkane dehalogenase; Provi | 5e-19 | |
| PRK03204 | 286 | PRK03204, PRK03204, haloalkane dehalogenase; Provi | 5e-15 | |
| COG2267 | 298 | COG2267, PldB, Lysophospholipase [Lipid metabolism | 5e-13 | |
| TIGR03695 | 252 | TIGR03695, menH_SHCHC, 2-succinyl-6-hydroxy-2,4-cy | 4e-09 | |
| PRK14875 | 371 | PRK14875, PRK14875, acetoin dehydrogenase E2 subun | 2e-07 | |
| PLN02578 | 354 | PLN02578, PLN02578, hydrolase | 3e-07 | |
| pfam12146 | 80 | pfam12146, Hydrolase_4, Putative lysophospholipase | 8e-07 | |
| TIGR03056 | 278 | TIGR03056, bchO_mg_che_rel, putative magnesium che | 1e-06 | |
| pfam12695 | 145 | pfam12695, Abhydrolase_5, Alpha/beta hydrolase fam | 1e-05 | |
| PLN02679 | 360 | PLN02679, PLN02679, hydrolase, alpha/beta fold fam | 2e-04 | |
| PHA02857 | 276 | PHA02857, PHA02857, monoglyceride lipase; Provisio | 3e-04 | |
| pfam12695 | 145 | pfam12695, Abhydrolase_5, Alpha/beta hydrolase fam | 0.002 | |
| PLN02652 | 395 | PLN02652, PLN02652, hydrolase; alpha/beta fold fam | 0.002 | |
| PLN02679 | 360 | PLN02679, PLN02679, hydrolase, alpha/beta fold fam | 0.004 | |
| TIGR02427 | 251 | TIGR02427, protocat_pcaD, 3-oxoadipate enol-lacton | 0.004 |
| >gnl|CDD|178633 PLN03084, PLN03084, alpha/beta hydrolase fold protein; Provisional | Back alignment and domain information |
|---|
Score = 166 bits (422), Expect = 7e-49
Identities = 99/271 (36%), Positives = 147/271 (54%), Gaps = 14/271 (5%)
Query: 13 GSYIKSGEYRWFVRETGSADSRLGTIVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLG 72
S S +RWF E+GS ++ ++ +HG PS +YSYR V+ +S +H A DWLG
Sbjct: 107 QSQASSDLFRWFCVESGSNNNP--PVLLIHGFPSQAYSYRKVLPVLSK-NYHAIAFDWLG 163
Query: 73 FGFSDKPEKGYDDFDFTENEFHEELDKLLDVLEVKYPFFLVVQGFLVGSYGLTWALKNPS 132
FGFSDKP+ GY F++T +E+ L+ L+D L LVVQG+ + +A +P
Sbjct: 164 FGFSDKPQPGY-GFNYTLDEYVSSLESLIDEL-KSDKVSLVVQGYFSPPV-VKYASAHPD 220
Query: 133 RISKLAILNSPLTAS-SPLPGLFQQLRIPLLGEFTAQNAIMA-ERFIEAGSPYVLKLDKA 190
+I KL +LN PLT + LP + LLGE +Q+ + A ++ + + PY +K D A
Sbjct: 221 KIKKLILLNPPLTKEHAKLPSTLSEFSNFLLGEIFSQDPLRASDKALTSCGPYAMKEDDA 280
Query: 191 DVYRLPYLASSGPGFALLEAAR--KVNFKDISSRIGAGFSSGSWDKPVLVAWGISDKYLP 248
VYR PYL S GFAL +R K K + + + +W P+ V WG+ D++L
Sbjct: 281 MVYRRPYLTSGSSGFALNAISRSMKKELKKYIEEMRSILTDKNWKTPITVCWGLRDRWLN 340
Query: 249 QSVAEEF-QKGNPNVVKLQMIEGAGHMPQED 278
E+F + +++L M AGH QED
Sbjct: 341 YDGVEDFCKSSQHKLIELPM---AGHHVQED 368
|
Length = 383 |
| >gnl|CDD|221720 pfam12697, Abhydrolase_6, Alpha/beta hydrolase family | Back alignment and domain information |
|---|
Score = 94.8 bits (236), Expect = 1e-23
Identities = 59/248 (23%), Positives = 94/248 (37%), Gaps = 62/248 (25%)
Query: 38 IVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEEL 97
+V LHGA + S+R + ++ AG+ APD G G SD P + + + +L
Sbjct: 1 VVLLHGAGGSAESWRPLAEALA-AGYRVLAPDLPGHGDSDGPPRTPYSLE----DDAADL 55
Query: 98 DKLLDVLEVKYPFFLVVQGFLVGSYGLTWALKNPSRISKLAILNSPLTASSPLPGLFQQL 157
LLD L + P LV G+ L A + P R++ L +++ PL
Sbjct: 56 AALLDALGLG-PVVLVGHSLG-GAVALAAAARRPERVAGLVLISPPLRD----------- 102
Query: 158 RIPLLGEFTAQNAIMAERFIEAGSPYVLKLDKADVYRLPYLASSGPGFALLEAARKVNFK 217
E + A + +L L +A + L EA ++
Sbjct: 103 ---------------LEELLAADAAALLALLRAALLD----------ADLREALARL--- 134
Query: 218 DISSRIGAGFSSGSWDKPVLVAWGISDKYLPQSVAEEFQKGNPNVVKLQMIEGAGHMPQE 277
PVLV G D +P A + P +L ++ GAGH+P
Sbjct: 135 ---------------TVPVLVIHGEDDPLVPPEAARRLAEALPG-AELVVLPGAGHLPHL 178
Query: 278 DWPEKVVD 285
+ PE+V +
Sbjct: 179 EHPEEVAE 186
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This family contains alpha/beta hydrolase enzymes of diverse specificity. Length = 187 |
| >gnl|CDD|235135 PRK03592, PRK03592, haloalkane dehalogenase; Provisional | Back alignment and domain information |
|---|
Score = 95.1 bits (237), Expect = 7e-23
Identities = 75/273 (27%), Positives = 111/273 (40%), Gaps = 35/273 (12%)
Query: 26 RETGSADSRLGTIVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDD 85
ETG D IVFLHG P+ SY +RN++ ++ G C APD +G G SDKP+ Y
Sbjct: 22 IETGEGD----PIVFLHGNPTSSYLWRNIIPHLAGLG-RCLAPDLIGMGASDKPDIDY-- 74
Query: 86 FDFTENEFHEELDKLLDVLEVKYPFFLVVQGFLVGSYGLTWALKNPSRISKLA----ILN 141
T + LD D L + LV + + G WA ++P R+ +A I+
Sbjct: 75 ---TFADHARYLDAWFDALGLD-DVVLVGHDW-GSALGFDWAARHPDRVRGIAFMEAIVR 129
Query: 142 SPLTASSPLPG--LFQQLRIPLLGE-FTAQNAIMAERFIEAGSPYVLKLDKADVYRLPYL 198
P LFQ LR P GE + + ER + L ++ VYR P+
Sbjct: 130 PMTWDDFPPAVRELFQALRSPGEGEEMVLEENVFIERVLPGSILRPLSDEEMAVYRRPFP 189
Query: 199 --ASSGPGFALLEAARKVNF----KDISSRIGAGFSSGSW----DKPVLVAWGISDKYLP 248
S P L R++ D+ + + W D P L+ L
Sbjct: 190 TPESRRP---TLSWPRELPIDGEPADVVALVEE---YAQWLATSDVPKLLINAEPGAILT 243
Query: 249 QSVAEEFQKGNPNVVKLQMIEGAGHMPQEDWPE 281
++ + PN +++ + H QED PE
Sbjct: 244 TGAIRDWCRSWPNQLEITVFGAGLHFAQEDSPE 276
|
Length = 295 |
| >gnl|CDD|223669 COG0596, MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Score = 94.3 bits (233), Expect = 2e-22
Identities = 67/291 (23%), Positives = 100/291 (34%), Gaps = 25/291 (8%)
Query: 13 GSYIKSGEYRWFVRETGSADSRLGTIVFLHGAPSHSYSYRNVMSQMSD--AGFHCFAPDW 70
+ + R RE G +V LHG P S +R V + A + APD
Sbjct: 2 SLLLAADGVRLAYREAGGGGP---PLVLLHGFPGSSSVWRPVFKVLPALAARYRVIAPDL 58
Query: 71 LGFGFSDKPEKGYDDFDFTENEFHEELDKLLDVLEVKYPFFLVVQGFLVGSY-GLTWALK 129
G G SD + ++L LLD L ++ LV G +G L AL+
Sbjct: 59 RGHGRSDPAGYSLSAYA-------DDLAALLDALGLE-KVVLV--GHSMGGAVALALALR 108
Query: 130 NPSRISKLAILNSPLTASSPL---------PGLFQQLRIPLLGEFTAQNAIMAERFIEAG 180
+P R+ L ++ L + L + A A++A + A
Sbjct: 109 HPDRVRGLVLIGPAPPPGLLEAALRQPAGAAPLAALADLLLGLDAAAFAALLAALGLLAA 168
Query: 181 SPYVLKLDKADVYRLPYLASSGPGFALLEAARKVNFKDISSRIGAGFSSGSWDKPVLVAW 240
+ A+ R P L ++ FA A + P L+
Sbjct: 169 LAAAARAGLAEALRAPLLGAAAAAFARAARADLAAALLALLDRDLRAALARITVPTLIIH 228
Query: 241 GISDKYLPQSVAEEFQKGNPNVVKLQMIEGAGHMPQEDWPEKVVDGLRYFF 291
G D +P +A PN +L +I GAGH P + PE L F
Sbjct: 229 GEDDPVVPAELARRLAAALPNDARLVVIPGAGHFPHLEAPEAFAAALLAFL 279
|
Length = 282 |
| >gnl|CDD|201306 pfam00561, Abhydrolase_1, alpha/beta hydrolase fold | Back alignment and domain information |
|---|
Score = 84.1 bits (208), Expect = 3e-19
Identities = 60/235 (25%), Positives = 88/235 (37%), Gaps = 29/235 (12%)
Query: 63 FHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEELDKLLDVLEVKYPFFLVVQGFLVG-S 121
F A D GFG S P+ D D+ ++ E+L+ LLD L + + LVG S
Sbjct: 1 FDVIAFDLRGFGRSSPPK---DFADYRFDDLAEDLEALLDALGLD-------KVNLVGHS 50
Query: 122 YG----LTWALKNPSRISKLAILNSPLTASSPLP-----GLFQQLRIPLLGEFTAQNAIM 172
G L +A K P R+ L ++ + A P L L +
Sbjct: 51 MGGLIALAYAAKYPDRVKALVLVGTVHPAGLSSPLTPRGNLLGLLLDNFFNRLYDSVEAL 110
Query: 173 AERFIEA----GSPYVLKLDKADVYRLPYLASSGPGFALLEAARKVNFKDISSRIGAGFS 228
R I+ G P+V K + L L G AL D+ A
Sbjct: 111 LGRAIKQFQALGRPFVSDFLKQ--FELSSLIRFGETLALDGLLGYALGYDLVWDRSAALK 168
Query: 229 SGSWDKPVLVAWGISDKYLPQSVAEEFQKGNPNVVKLQMIEGAGHMPQEDWPEKV 283
D P L+ WG D +P + E +L +I+ AGH+ Q + P++V
Sbjct: 169 --DIDVPTLIIWGDDDPLVPPDAS-EKLAALFPNAQLVVIDDAGHLAQLEKPDEV 220
|
This catalytic domain is found in a very wide range of enzymes. Length = 226 |
| >gnl|CDD|179147 PRK00870, PRK00870, haloalkane dehalogenase; Provisional | Back alignment and domain information |
|---|
Score = 84.6 bits (210), Expect = 5e-19
Identities = 79/283 (27%), Positives = 116/283 (40%), Gaps = 54/283 (19%)
Query: 27 ETGSADSRLGTIVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDF 86
+ G AD ++ LHG PS SY YR ++ ++ AG APD +GFG SDKP
Sbjct: 40 DEGPADGP--PVLLLHGEPSWSYLYRKMIPILAAAGHRVIAPDLIGFGRSDKPT---RRE 94
Query: 87 DFTENEFHEELDKLLDVLEVKYPFFLVVQ--GFLVGSYGLTWALKNPSRISKLAILNSPL 144
D+T E + + L++ LV Q G L+ GL A ++P R ++L + N+ L
Sbjct: 95 DYTYARHVEWMRSWFEQLDLT-DVTLVCQDWGGLI---GLRLAAEHPDRFARLVVANTGL 150
Query: 145 -TASSPLPGLFQQLRIPLLGEFTAQNAIM-AERFIEAGS--------------PYVLKLD 188
T P+P F R F+ + ++ R + G+ P+ +
Sbjct: 151 PTGDGPMPDAFWAWR-----AFSQYSPVLPVGRLVNGGTVRDLSDAVRAAYDAPFPDESY 205
Query: 189 KADVYRLPYLASSGPGFALLEAARKVNFKDISSRIGAGFSSGSWDKPVLVAWGISDKYLP 248
KA P L + P + A R A WDKP L A+ SD
Sbjct: 206 KAGARAFPLLVPTSPDDPAVAANRA-----------AWAVLERWDKPFLTAFSDSDPITG 254
Query: 249 QSVAEEFQK------GNPNVVKLQMIEGAGHMPQEDWPEKVVD 285
QK G P+ I+GAGH QED E++ +
Sbjct: 255 GG-DAILQKRIPGAAGQPHPT----IKGAGHFLQEDSGEELAE 292
|
Length = 302 |
| >gnl|CDD|179554 PRK03204, PRK03204, haloalkane dehalogenase; Provisional | Back alignment and domain information |
|---|
Score = 73.4 bits (180), Expect = 5e-15
Identities = 70/279 (25%), Positives = 121/279 (43%), Gaps = 31/279 (11%)
Query: 20 EYRWFVRETGSA---DSRLG-TIVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGFGF 75
E RWF G D G I+ HG P+ S+ YR+++ + D F C APD+LGFG
Sbjct: 15 ESRWFDSSRGRIHYIDEGTGPPILLCHGNPTWSFLYRDIIVALRDR-FRCVAPDYLGFGL 73
Query: 76 SDKPEKGYDDFDFTENEFHEELDKLLDVLEVKYPFFLVVQGFLVGSYGLTWALKNPSRIS 135
S++P F + +E + + +D L + +L + G + A++ R+
Sbjct: 74 SERP----SGFGYQIDEHARVIGEFVDHLGLDR--YLSMGQDWGGPISMAVAVERADRVR 127
Query: 136 KLAILNSPLTASSPLPGLFQQLRIPLLGEFTAQNAI-----MAERFIEAGSPYVLKLDKA 190
+ + N T P L + ++ Q AI ER I AG+ +
Sbjct: 128 GVVLGN---TWFWPADTLAMKAFSRVMSSPPVQYAILRRNFFVERLIPAGTEHRPSSAVM 184
Query: 191 DVYR-LPYLASSGPGFALL----EAARKVNFKDISSRIGAGFSSGSWDKPVLVAWGISDK 245
YR + A++ G A + AAR + ++ + A KP L+ WG+ D
Sbjct: 185 AHYRAVQPNAAARRGVAEMPKQILAARPL-LARLAREVPATLG----TKPTLLVWGMKDV 239
Query: 246 -YLPQSVAEEFQKGNPNVVKLQMIEGAGHMPQEDWPEKV 283
+ P+++ + P+ V +++ A H QED P+++
Sbjct: 240 AFRPKTILPRLRATFPDHVLVEL-PNAKHFIQEDAPDRI 277
|
Length = 286 |
| >gnl|CDD|225176 COG2267, PldB, Lysophospholipase [Lipid metabolism] | Back alignment and domain information |
|---|
Score = 67.4 bits (165), Expect = 5e-13
Identities = 61/271 (22%), Positives = 110/271 (40%), Gaps = 43/271 (15%)
Query: 21 YRWFVRETGSADSRLGTIVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGFGFSDKPE 80
W E G +V +HG HS Y + ++ GF +A D G G S + +
Sbjct: 25 RTWAAPE-----PPKGVVVLVHGLGEHSGRYEELADDLAARGFDVYALDLRGHGRSPRGQ 79
Query: 81 KGY-DDFDFTENEFHEELDKLLDVLEVKY---PFFLVVQ---GFLVGSYGLTWALKNPSR 133
+G+ D F + ++LD ++ + P FL+ G + L + + P R
Sbjct: 80 RGHVDSFAD----YVDDLDAFVETIAEPDPGLPVFLLGHSMGGLIA----LLYLARYPPR 131
Query: 134 ISKLAILNSPLTA--SSPLPGLFQQLRIPLLGEFTAQNAIMAERFIEAGS------PYVL 185
I L +L+SP + L + +L + LLG + + + + P +
Sbjct: 132 IDGL-VLSSPALGLGGAILRLILARLALKLLGRIRPKLPVDSNLLEGVLTDDLSRDPAEV 190
Query: 186 KLDKADVYRLPYLASSGPGFALLEAARKVNFKDISSRIGAGFSSGSWDKPVLVAWGISDK 245
+AD P + GP ++ A R+ A + + PVL+ G D+
Sbjct: 191 AAYEAD----PLIGVGGPVSRWVDLALLA------GRVPALRDAPAIALPVLLLQGGDDR 240
Query: 246 --YLPQSVAEEFQK-GNPNVVKLQMIEGAGH 273
+ +A F++ G+P+ +L++I GA H
Sbjct: 241 VVDNVEGLARFFERAGSPD-KELKVIPGAYH 270
|
Length = 298 |
| >gnl|CDD|234315 TIGR03695, menH_SHCHC, 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase | Back alignment and domain information |
|---|
Score = 55.7 bits (135), Expect = 4e-09
Identities = 79/283 (27%), Positives = 108/283 (38%), Gaps = 63/283 (22%)
Query: 37 TIVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGFGFSDKP-EKGYDDFDFTENEFHE 95
+VFLHG ++ ++ + F C A D G G S P + DF+
Sbjct: 4 VLVFLHGFLGSGADWQALIELLGP-HFRCLAIDLPGHGSSQSPSDIERYDFEEIA---QL 59
Query: 96 ELDKLLDVLEVKYPFFLVVQGF-LVGSYGLTWALKNPSRISKLAILNSPLTASSPLPGLF 154
L LLD L + PFFLV G+ + G L +AL+ P R+ L IL S S PGL
Sbjct: 60 LLATLLDQLGI-EPFFLV--GYSMGGRIALYYALQYPERVQGL-ILES----GS--PGLA 109
Query: 155 ----QQLRIPLLGEFTAQNAIMAERFIEAGSPYVLKLDKADVYRLPYLASSGPGFALLEA 210
+ R + +A+RF + G L D Y+ P AS L
Sbjct: 110 TEEERAARR-------QNDEQLAQRFEQEGIEAFL----DDWYQQPLFASQ---KNLPPE 155
Query: 211 ARKVNFKDISSR-------IGA---GFSSGS----WDK------PVLVAWGISD-KYLPQ 249
R+ + R + G W K PVL G D K+
Sbjct: 156 QRQ---ALRAKRLANNPEGLAKMLRATGLGKQPSLWPKLQALKIPVLYLCGEKDEKF--V 210
Query: 250 SVAEEFQKGNPNVVKLQMIEGAGHMP-QEDWPEKVVDGLRYFF 291
+A+E QK PN + L +I AGH E+ PE L F
Sbjct: 211 QIAKEMQKLIPN-LTLVIIANAGHNIHLEN-PEAFAKILLAFL 251
|
This protein catalyzes the formation of SHCHC, or (1 R,6 R)-2-succinyl-6-hydroxy-2, 4-cyclohexadiene-1-carboxylate, by elmination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1- carboxylate (SEPHCHC). Note that SHCHC synthase activity previously was attributed to MenD, which in fact is SEPHCHC synthase [Biosynthesis of cofactors, prosthetic groups, and carriers, Menaquinone and ubiquinone]. Length = 252 |
| >gnl|CDD|184875 PRK14875, PRK14875, acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional | Back alignment and domain information |
|---|
Score = 51.5 bits (124), Expect = 2e-07
Identities = 22/59 (37%), Positives = 31/59 (52%), Gaps = 4/59 (6%)
Query: 233 DKPVLVAWGISDKYLPQSVAEEFQKGNPNVVKLQMIEGAGHMPQEDWPEKVVDGLRYFF 291
PVLV WG D+ +P + A+ G P+ V + ++ GAGHMPQ + V L F
Sbjct: 314 AIPVLVIWGEQDRIIPAAHAQ----GLPDGVAVHVLPGAGHMPQMEAAADVNRLLAEFL 368
|
Length = 371 |
| >gnl|CDD|215315 PLN02578, PLN02578, hydrolase | Back alignment and domain information |
|---|
Score = 50.6 bits (121), Expect = 3e-07
Identities = 72/279 (25%), Positives = 125/279 (44%), Gaps = 56/279 (20%)
Query: 38 IVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEEL 97
IV +HG + ++ +R + +++ + +A D LGFG+SDK YD + + +
Sbjct: 89 IVLIHGFGASAFHWRYNIPELAKK-YKVYALDLLGFGWSDKALIEYDAMVWRD----QVA 143
Query: 98 DKLLDVLEVKYPFFLVVQGFLVGSY-GLTWALKNPSRISKLAILNSPLTASSPLPGLFQQ 156
D + +V VK P LV G +G + L+ A+ P ++ +A+LNS S ++
Sbjct: 144 DFVKEV--VKEPAVLV--GNSLGGFTALSTAVGYPELVAGVALLNSAGQFGSESR---EK 196
Query: 157 LRIPLLGEFTAQNAIM------AER------FIEAGSP----YVLK---LDKADVYRLPY 197
++ E ++ +R F +A P VLK DK++V Y
Sbjct: 197 EEAIVVEETVLTRFVVKPLKEWFQRVVLGFLFWQAKQPSRIESVLKSVYKDKSNVDD--Y 254
Query: 198 LASSGPGFALLEAARKVNFKDISSRIGAGF----SSGSWDK-------PVLVAWGISDKY 246
L S + E A N ++ R+ + F S + D P+L+ WG D +
Sbjct: 255 LVES-----ITEPAADPNAGEVYYRLMSRFLFNQSRYTLDSLLSKLSCPLLLLWGDLDPW 309
Query: 247 LPQSVAEEFQKGNPN--VVKLQMIEGAGHMPQEDWPEKV 283
+ + AE+ + P+ +V LQ AGH P ++ PE+V
Sbjct: 310 VGPAKAEKIKAFYPDTTLVNLQ----AGHCPHDEVPEQV 344
|
Length = 354 |
| >gnl|CDD|221442 pfam12146, Hydrolase_4, Putative lysophospholipase | Back alignment and domain information |
|---|
Score = 45.6 bits (109), Expect = 8e-07
Identities = 17/68 (25%), Positives = 34/68 (50%), Gaps = 6/68 (8%)
Query: 36 GTIVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGY-DDFDFTENEFH 94
+V +HG HS Y + +++ G+ +A D G G S ++G+ FD ++
Sbjct: 18 AVVVLVHGGGEHSGRYAELAEELAAQGYAVYAYDHRGHGRSP-GKRGHVPSFD----DYV 72
Query: 95 EELDKLLD 102
++LD ++
Sbjct: 73 DDLDTFVE 80
|
This domain is found in bacteria and eukaryotes and is approximately 110 amino acids in length. It is found in association with pfam00561. Many members are annotated as being lysophospholipases, and others as alpha-beta hydrolase fold-containing proteins. Length = 80 |
| >gnl|CDD|132100 TIGR03056, bchO_mg_che_rel, putative magnesium chelatase accessory protein | Back alignment and domain information |
|---|
Score = 48.7 bits (116), Expect = 1e-06
Identities = 66/296 (22%), Positives = 110/296 (37%), Gaps = 49/296 (16%)
Query: 9 GREYGSYIKSGEYRWFVRETGSADSRLGTIVFLHGAPSHSYSYRNVMSQMSDAGFHCFAP 68
R+ + G + W V++ G ++ LHG + ++S+R++M ++ F AP
Sbjct: 4 HRDCSRRVTVGPFHWHVQDMGPTAGP--LLLLLHGTGASTHSWRDLMPPLA-RSFRVVAP 60
Query: 69 DWLGFGFSDKPEKGYDDFDFTENEFHEELDKLLDVLEVKYPFFLVVQGFLVG-SYGLTWA 127
D G GF+ P + F FT E+L L + V G G + L A
Sbjct: 61 DLPGHGFTRAPFR----FRFTLPSMAEDLSALCAAEGLSPD---GVIGHSAGAAIALRLA 113
Query: 128 LKNPSRISKLAILNSPLTASSPLPGLFQQLRIPLLGEFTAQN---AIMAERFIEAGSPYV 184
L P + +N+ L P G+ L P + A N M R
Sbjct: 114 LDGPVTPRMVVGINAAL---MPFEGMAGTL-FPYMARVLACNPFTPPMMSRGAA------ 163
Query: 185 LKLDKADVYRLPYLASSGPGFALLEAARKVNFKDI---SSRIGAGFS-SGSWD------- 233
D+ V RL + +G +LL+ A + + + + S WD
Sbjct: 164 ---DQQRVERL--IRDTG---SLLDKAGMTYYGRLIRSPAHVDGALSMMAQWDLAPLNRD 215
Query: 234 -----KPVLVAWGISDKYLPQSVAEEFQKGNPNVVKLQMIEGAGHMPQEDWPEKVV 284
P+ + G DK +P ++ P L ++ G GH+ E+ + VV
Sbjct: 216 LPRITIPLHLIAGEEDKAVPPDESKRAATRVP-TATLHVVPGGGHLVHEEQADGVV 270
|
Members of this family belong to the alpha/beta fold family hydrolases (pfam00561). Members are found in bacterial genomes if and only if they encoded for anoxygenic photosynthetic systems similar to that of Rhodobacter capsulatus and other alpha-Proteobacteria. Members often are encoded in the same operon as subunits of the protoporphyrin IX magnesium chelatase, and were once designated BchO. No literature supports a role as an actual subunit of magnesium chelatase, but an accessory role is possible, as suggested by placement by its probable hydrolase activity [Energy metabolism, Photosynthesis]. Length = 278 |
| >gnl|CDD|221718 pfam12695, Abhydrolase_5, Alpha/beta hydrolase family | Back alignment and domain information |
|---|
Score = 43.9 bits (104), Expect = 1e-05
Identities = 23/126 (18%), Positives = 42/126 (33%), Gaps = 18/126 (14%)
Query: 37 TIVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEE 96
+V LHGA +Y + ++ G++ A D+ G G S G D + +
Sbjct: 1 LVVLLHGAGGDPEAYAPLARALASRGYNVVAVDYPGHGASL----GAPDAE----AVLAD 52
Query: 97 LDKLLDVLEVKYPFFLVVQGFLVGSYGLTWALKNPSRISKLAILNSPLTASSPLPGLFQQ 156
+ LV G +G R+ +L + + +
Sbjct: 53 APLDPE------RIVLV--GHSLGGGVALLLAARDPRVKAAVVLAAGDPPDALDD--LAK 102
Query: 157 LRIPLL 162
L +P+L
Sbjct: 103 LTVPVL 108
|
This family contains a diverse range of alpha/beta hydrolase enzymes. Length = 145 |
| >gnl|CDD|178283 PLN02679, PLN02679, hydrolase, alpha/beta fold family protein | Back alignment and domain information |
|---|
Score = 41.7 bits (98), Expect = 2e-04
Identities = 22/59 (37%), Positives = 30/59 (50%), Gaps = 6/59 (10%)
Query: 234 KPVLVAWGISDKYLP--QSVAEEFQK---GNPNVVKLQMIEGAGHMPQEDWPEKVVDGL 287
P+LV WG D + P V + F PNV L ++EG GH P +D P+ V + L
Sbjct: 293 LPILVLWGDQDPFTPLDGPVGKYFSSLPSQLPNV-TLYVLEGVGHCPHDDRPDLVHEKL 350
|
Length = 360 |
| >gnl|CDD|165193 PHA02857, PHA02857, monoglyceride lipase; Provisional | Back alignment and domain information |
|---|
Score = 41.4 bits (97), Expect = 3e-04
Identities = 61/249 (24%), Positives = 103/249 (41%), Gaps = 39/249 (15%)
Query: 38 IVFL-HGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEE 96
+VF+ HGA HS Y + +S G F+ D +G G S+ + DDF + +
Sbjct: 27 LVFISHGAGEHSGRYEELAENISSLGILVFSHDHIGHGRSNGEKMMIDDF----GVYVRD 82
Query: 97 LDKLLDVLEVKYPFFLVVQGFLVG-SYGLTWAL----KNPSRISKLAILNSPLTASSPLP 151
+ + + ++ YP V FL+G S G T ++ KNP+ + IL SPL + +P
Sbjct: 83 VVQHVVTIKSTYP---GVPVFLLGHSMGATISILAAYKNPN-LFTAMILMSPLVNAEAVP 138
Query: 152 GLFQQLRIPLLGEFTAQNAIMAERFIEAGSPYVLKLDKADVYRL---PYLASSG--PGFA 206
R+ LL + + P + D +VY+ P + GFA
Sbjct: 139 ------RLNLLAAKLM-GIFYPNKIVGKLCPESVSRDMDEVYKYQYDPLVNHEKIKAGFA 191
Query: 207 --LLEAARKVNFKDISSRIGAGFSSGSWDKPVLVAWGISDKYLPQSVAEEFQKGNPNVVK 264
+L+A KV + P+L+ G +++ S A F + +
Sbjct: 192 SQVLKATNKVRKIIPKIKT-----------PILILQGTNNEISDVSGAYYFMQHANCNRE 240
Query: 265 LQMIEGAGH 273
+++ EGA H
Sbjct: 241 IKIYEGAKH 249
|
Length = 276 |
| >gnl|CDD|221718 pfam12695, Abhydrolase_5, Alpha/beta hydrolase family | Back alignment and domain information |
|---|
Score = 37.4 bits (87), Expect = 0.002
Identities = 16/41 (39%), Positives = 20/41 (48%)
Query: 233 DKPVLVAWGISDKYLPQSVAEEFQKGNPNVVKLQMIEGAGH 273
PVL+ G D +P AE P +L +IEGAGH
Sbjct: 104 TVPVLIIHGTRDGVVPPEEAEALAAALPGPAELVVIEGAGH 144
|
This family contains a diverse range of alpha/beta hydrolase enzymes. Length = 145 |
| >gnl|CDD|215352 PLN02652, PLN02652, hydrolase; alpha/beta fold family protein | Back alignment and domain information |
|---|
Score = 38.7 bits (90), Expect = 0.002
Identities = 17/47 (36%), Positives = 25/47 (53%)
Query: 31 ADSRLGTIVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGFGFSD 77
A G ++ +HG HS Y + Q++ GF +A DW+G G SD
Sbjct: 132 AGEMRGILIIIHGLNEHSGRYLHFAKQLTSCGFGVYAMDWIGHGGSD 178
|
Length = 395 |
| >gnl|CDD|178283 PLN02679, PLN02679, hydrolase, alpha/beta fold family protein | Back alignment and domain information |
|---|
Score = 37.9 bits (88), Expect = 0.004
Identities = 39/130 (30%), Positives = 58/130 (44%), Gaps = 18/130 (13%)
Query: 19 GEYR--WFVRETGSADSRLGTIVFLHG-APSHSYSYRNVMSQMSDAGFHCFAPDWLGFGF 75
GEY + V+ + S ++ +HG S + RN+ + + +A D LGFG
Sbjct: 70 GEYSINYLVKGSPEVTSSGPPVLLVHGFGASIPHWRRNIGVLAKN--YTVYAIDLLGFGA 127
Query: 76 SDKPEKGYDDFDFTENEFHEELDKLLDVLE--VKYPFFLVVQGFLVGSYGLTWALKNPSR 133
SDKP F +T + E +LD LE V+ P L+ G VGS A +R
Sbjct: 128 SDKPPG----FSYTMETWAE---LILDFLEEVVQKPTVLI--GNSVGSLACVIAASESTR 178
Query: 134 --ISKLAILN 141
+ L +LN
Sbjct: 179 DLVRGLVLLN 188
|
Length = 360 |
| >gnl|CDD|131480 TIGR02427, protocat_pcaD, 3-oxoadipate enol-lactonase | Back alignment and domain information |
|---|
Score = 37.7 bits (88), Expect = 0.004
Identities = 56/239 (23%), Positives = 81/239 (33%), Gaps = 32/239 (13%)
Query: 60 DAGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEELDKLLDVLEVKYPFFLVVQGFLV 119
F D G G SD PE Y + + +++ LLD L ++ + L
Sbjct: 37 TPDFRVLRYDKRGHGLSDAPEGPY-----SIEDLADDVLALLDHLGIE--RAVFCGLSLG 89
Query: 120 GSYGLTWALKNPSRISKLAILNSPLTASSPLPGLFQQLRIPLLGEFTAQNAIMA------ 173
G A + P R+ L + N+ +P RI + A
Sbjct: 90 GLIAQGLAARRPDRVRALVLSNTAAKIGTPES---WNARI----AAVRAEGLAALADAVL 142
Query: 174 ERFIEAGSPYVLKLDKADVYRLPYLASSGPGFALLEAA-RKVNFKDISSRIGAGFSSGSW 232
ER+ G + D+YR + G+A AA R +F+D I
Sbjct: 143 ERWFTPGF-REAHPARLDLYRNMLVRQPPDGYAGCCAAIRDADFRDRLGAIAV------- 194
Query: 233 DKPVLVAWGISDKYLPQSVAEEFQKGNPNVVKLQMIEGAGHMPQEDWPEKVVDGLRYFF 291
P L G D P + E P + I GAGH+P + PE LR F
Sbjct: 195 --PTLCIAGDQDGSTPPELVREIADLVPGA-RFAEIRGAGHIPCVEQPEAFNAALRDFL 250
|
Members of this family are 3-oxoadipate enol-lactonase. Note that the substrate is known as 3-oxoadipate enol-lactone, 2-oxo-2,3-dihydrofuran-5-acetate, 4,5-Dihydro-5-oxofuran-2-acetate, and 5-oxo-4,5-dihydrofuran-2-acetate. The enzyme the catalyzes the fourth step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. This enzyme also acts in catechol degradation. In genomes that catabolize both catechol and protocatechuate, two forms of this enzyme may be found. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate [Energy metabolism, Other]. Length = 251 |
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 295 | |||
| KOG4178 | 322 | consensus Soluble epoxide hydrolase [Lipid transpo | 100.0 | |
| PLN03084 | 383 | alpha/beta hydrolase fold protein; Provisional | 100.0 | |
| PRK00870 | 302 | haloalkane dehalogenase; Provisional | 100.0 | |
| TIGR02240 | 276 | PHA_depoly_arom poly(3-hydroxyalkanoate) depolymer | 100.0 | |
| PLN02824 | 294 | hydrolase, alpha/beta fold family protein | 100.0 | |
| PRK03204 | 286 | haloalkane dehalogenase; Provisional | 100.0 | |
| PRK03592 | 295 | haloalkane dehalogenase; Provisional | 100.0 | |
| PLN02679 | 360 | hydrolase, alpha/beta fold family protein | 100.0 | |
| PLN02965 | 255 | Probable pheophorbidase | 100.0 | |
| TIGR03343 | 282 | biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-die | 99.97 | |
| TIGR03056 | 278 | bchO_mg_che_rel putative magnesium chelatase acces | 99.97 | |
| PLN03087 | 481 | BODYGUARD 1 domain containing hydrolase; Provision | 99.97 | |
| PRK10349 | 256 | carboxylesterase BioH; Provisional | 99.97 | |
| PLN02385 | 349 | hydrolase; alpha/beta fold family protein | 99.97 | |
| PRK06489 | 360 | hypothetical protein; Provisional | 99.97 | |
| PLN02578 | 354 | hydrolase | 99.97 | |
| PHA02857 | 276 | monoglyceride lipase; Provisional | 99.97 | |
| TIGR03611 | 257 | RutD pyrimidine utilization protein D. This protei | 99.97 | |
| PRK10673 | 255 | acyl-CoA esterase; Provisional | 99.97 | |
| PRK10749 | 330 | lysophospholipase L2; Provisional | 99.97 | |
| KOG4409 | 365 | consensus Predicted hydrolase/acyltransferase (alp | 99.96 | |
| PLN02298 | 330 | hydrolase, alpha/beta fold family protein | 99.96 | |
| PRK08775 | 343 | homoserine O-acetyltransferase; Provisional | 99.96 | |
| PRK07581 | 339 | hypothetical protein; Validated | 99.96 | |
| TIGR02427 | 251 | protocat_pcaD 3-oxoadipate enol-lactonase. Members | 99.96 | |
| PRK11126 | 242 | 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxyl | 99.96 | |
| TIGR01738 | 245 | bioH putative pimeloyl-BioC--CoA transferase BioH. | 99.96 | |
| PRK00175 | 379 | metX homoserine O-acetyltransferase; Provisional | 99.96 | |
| TIGR01392 | 351 | homoserO_Ac_trn homoserine O-acetyltransferase. Th | 99.96 | |
| PLN02211 | 273 | methyl indole-3-acetate methyltransferase | 99.95 | |
| KOG1454 | 326 | consensus Predicted hydrolase/acyltransferase (alp | 99.95 | |
| PLN02894 | 402 | hydrolase, alpha/beta fold family protein | 99.95 | |
| COG2267 | 298 | PldB Lysophospholipase [Lipid metabolism] | 99.95 | |
| TIGR01250 | 288 | pro_imino_pep_2 proline-specific peptidases, Bacil | 99.95 | |
| PF12697 | 228 | Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3 | 99.95 | |
| PLN02652 | 395 | hydrolase; alpha/beta fold family protein | 99.95 | |
| KOG1455 | 313 | consensus Lysophospholipase [Lipid transport and m | 99.94 | |
| PRK14875 | 371 | acetoin dehydrogenase E2 subunit dihydrolipoyllysi | 99.94 | |
| TIGR03695 | 251 | menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene | 99.94 | |
| PRK05855 | 582 | short chain dehydrogenase; Validated | 99.93 | |
| PLN02980 | 1655 | 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesi | 99.93 | |
| TIGR01249 | 306 | pro_imino_pep_1 proline iminopeptidase, Neisseria- | 99.93 | |
| TIGR01607 | 332 | PST-A Plasmodium subtelomeric family (PST-A). Thes | 99.93 | |
| PLN02511 | 388 | hydrolase | 99.9 | |
| KOG2984 | 277 | consensus Predicted hydrolase [General function pr | 99.89 | |
| PRK06765 | 389 | homoserine O-acetyltransferase; Provisional | 99.88 | |
| KOG2382 | 315 | consensus Predicted alpha/beta hydrolase [General | 99.86 | |
| TIGR03100 | 274 | hydr1_PEP hydrolase, ortholog 1, exosortase system | 99.84 | |
| PRK05077 | 414 | frsA fermentation/respiration switch protein; Revi | 99.84 | |
| COG1647 | 243 | Esterase/lipase [General function prediction only] | 99.84 | |
| PRK10985 | 324 | putative hydrolase; Provisional | 99.84 | |
| PF00561 | 230 | Abhydrolase_1: alpha/beta hydrolase fold A web pag | 99.81 | |
| PRK13604 | 307 | luxD acyl transferase; Provisional | 99.8 | |
| PLN02872 | 395 | triacylglycerol lipase | 99.8 | |
| COG0596 | 282 | MhpC Predicted hydrolases or acyltransferases (alp | 99.8 | |
| PRK10566 | 249 | esterase; Provisional | 99.79 | |
| TIGR01836 | 350 | PHA_synth_III_C poly(R)-hydroxyalkanoic acid synth | 99.79 | |
| TIGR01838 | 532 | PHA_synth_I poly(R)-hydroxyalkanoic acid synthase, | 99.79 | |
| PRK11071 | 190 | esterase YqiA; Provisional | 99.78 | |
| PRK07868 | 994 | acyl-CoA synthetase; Validated | 99.74 | |
| KOG2564 | 343 | consensus Predicted acetyltransferases and hydrola | 99.71 | |
| KOG2931 | 326 | consensus Differentiation-related gene 1 protein ( | 99.7 | |
| PF03096 | 283 | Ndr: Ndr family; InterPro: IPR004142 This family c | 99.69 | |
| PF06342 | 297 | DUF1057: Alpha/beta hydrolase of unknown function | 99.69 | |
| PF12146 | 79 | Hydrolase_4: Putative lysophospholipase; InterPro: | 99.67 | |
| TIGR03101 | 266 | hydr2_PEP hydrolase, ortholog 2, exosortase system | 99.66 | |
| PF12695 | 145 | Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3 | 99.64 | |
| KOG1552 | 258 | consensus Predicted alpha/beta hydrolase [General | 99.61 | |
| KOG2565 | 469 | consensus Predicted hydrolases or acyltransferases | 99.56 | |
| PRK11460 | 232 | putative hydrolase; Provisional | 99.56 | |
| TIGR02821 | 275 | fghA_ester_D S-formylglutathione hydrolase. This m | 99.51 | |
| COG2021 | 368 | MET2 Homoserine acetyltransferase [Amino acid tran | 99.5 | |
| PLN02442 | 283 | S-formylglutathione hydrolase | 99.49 | |
| KOG4667 | 269 | consensus Predicted esterase [Lipid transport and | 99.48 | |
| COG0429 | 345 | Predicted hydrolase of the alpha/beta-hydrolase fo | 99.47 | |
| PLN00021 | 313 | chlorophyllase | 99.44 | |
| COG1506 | 620 | DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-pept | 99.44 | |
| KOG4391 | 300 | consensus Predicted alpha/beta hydrolase BEM46 [Ge | 99.39 | |
| COG3208 | 244 | GrsT Predicted thioesterase involved in non-riboso | 99.37 | |
| TIGR03230 | 442 | lipo_lipase lipoprotein lipase. Members of this pr | 99.37 | |
| TIGR01840 | 212 | esterase_phb esterase, PHB depolymerase family. Th | 99.34 | |
| PF00326 | 213 | Peptidase_S9: Prolyl oligopeptidase family This fa | 99.3 | |
| TIGR01839 | 560 | PHA_synth_II poly(R)-hydroxyalkanoic acid synthase | 99.27 | |
| TIGR03502 | 792 | lipase_Pla1_cef extracellular lipase, Pla-1/cef fa | 99.26 | |
| cd00707 | 275 | Pancreat_lipase_like Pancreatic lipase-like enzyme | 99.23 | |
| KOG1838 | 409 | consensus Alpha/beta hydrolase [General function p | 99.2 | |
| PF00975 | 229 | Thioesterase: Thioesterase domain; InterPro: IPR00 | 99.19 | |
| PF02230 | 216 | Abhydrolase_2: Phospholipase/Carboxylesterase; Int | 99.16 | |
| PF05448 | 320 | AXE1: Acetyl xylan esterase (AXE1); InterPro: IPR0 | 99.14 | |
| TIGR00976 | 550 | /NonD putative hydrolase, CocE/NonD family. This m | 99.1 | |
| PF01738 | 218 | DLH: Dienelactone hydrolase family; InterPro: IPR0 | 99.09 | |
| PRK10162 | 318 | acetyl esterase; Provisional | 99.07 | |
| COG0400 | 207 | Predicted esterase [General function prediction on | 99.06 | |
| PF06500 | 411 | DUF1100: Alpha/beta hydrolase of unknown function | 99.01 | |
| PF06821 | 171 | Ser_hydrolase: Serine hydrolase; InterPro: IPR0106 | 99.0 | |
| PRK10252 | 1296 | entF enterobactin synthase subunit F; Provisional | 98.98 | |
| COG3458 | 321 | Acetyl esterase (deacetylase) [Secondary metabolit | 98.93 | |
| TIGR01849 | 406 | PHB_depoly_PhaZ polyhydroxyalkanoate depolymerase, | 98.88 | |
| COG3571 | 213 | Predicted hydrolase of the alpha/beta-hydrolase fo | 98.87 | |
| COG2945 | 210 | Predicted hydrolase of the alpha/beta superfamily | 98.86 | |
| COG0412 | 236 | Dienelactone hydrolase and related enzymes [Second | 98.85 | |
| PRK10115 | 686 | protease 2; Provisional | 98.78 | |
| PTZ00472 | 462 | serine carboxypeptidase (CBP1); Provisional | 98.77 | |
| PF02273 | 294 | Acyl_transf_2: Acyl transferase; InterPro: IPR0031 | 98.77 | |
| COG4757 | 281 | Predicted alpha/beta hydrolase [General function p | 98.75 | |
| PF05728 | 187 | UPF0227: Uncharacterised protein family (UPF0227); | 98.68 | |
| COG3243 | 445 | PhaC Poly(3-hydroxyalkanoate) synthetase [Lipid me | 98.67 | |
| PF10230 | 266 | DUF2305: Uncharacterised conserved protein (DUF230 | 98.6 | |
| KOG2624 | 403 | consensus Triglyceride lipase-cholesterol esterase | 98.58 | |
| PF12740 | 259 | Chlorophyllase2: Chlorophyllase enzyme; InterPro: | 98.58 | |
| PF07819 | 225 | PGAP1: PGAP1-like protein; InterPro: IPR012908 The | 98.54 | |
| PRK05371 | 767 | x-prolyl-dipeptidyl aminopeptidase; Provisional | 98.38 | |
| PF10503 | 220 | Esterase_phd: Esterase PHB depolymerase | 98.37 | |
| PF07859 | 211 | Abhydrolase_3: alpha/beta hydrolase fold A web pag | 98.35 | |
| KOG3043 | 242 | consensus Predicted hydrolase related to dienelact | 98.34 | |
| PF09752 | 348 | DUF2048: Uncharacterized conserved protein (DUF204 | 98.28 | |
| smart00824 | 212 | PKS_TE Thioesterase. Peptide synthetases are invol | 98.27 | |
| PLN02733 | 440 | phosphatidylcholine-sterol O-acyltransferase | 98.27 | |
| PF07224 | 307 | Chlorophyllase: Chlorophyllase; InterPro: IPR01082 | 98.24 | |
| KOG1515 | 336 | consensus Arylacetamide deacetylase [Defense mecha | 98.22 | |
| PF06028 | 255 | DUF915: Alpha/beta hydrolase of unknown function ( | 98.17 | |
| PF03959 | 212 | FSH1: Serine hydrolase (FSH1); InterPro: IPR005645 | 98.15 | |
| PF00450 | 415 | Peptidase_S10: Serine carboxypeptidase; InterPro: | 98.11 | |
| PF01674 | 219 | Lipase_2: Lipase (class 2); InterPro: IPR002918 Li | 98.1 | |
| PF08538 | 303 | DUF1749: Protein of unknown function (DUF1749); In | 98.08 | |
| COG0657 | 312 | Aes Esterase/lipase [Lipid metabolism] | 98.03 | |
| PF02129 | 272 | Peptidase_S15: X-Pro dipeptidyl-peptidase (S15 fam | 98.02 | |
| PF08386 | 103 | Abhydrolase_4: TAP-like protein; InterPro: IPR0135 | 97.97 | |
| COG4188 | 365 | Predicted dienelactone hydrolase [General function | 97.93 | |
| COG3319 | 257 | Thioesterase domains of type I polyketide synthase | 97.93 | |
| COG3545 | 181 | Predicted esterase of the alpha/beta hydrolase fol | 97.92 | |
| PF03583 | 290 | LIP: Secretory lipase ; InterPro: IPR005152 This e | 97.85 | |
| KOG4627 | 270 | consensus Kynurenine formamidase [Amino acid trans | 97.82 | |
| KOG2281 | 867 | consensus Dipeptidyl aminopeptidases/acylaminoacyl | 97.78 | |
| PF12715 | 390 | Abhydrolase_7: Abhydrolase family; PDB: 3NUZ_C 3G8 | 97.77 | |
| COG3509 | 312 | LpqC Poly(3-hydroxybutyrate) depolymerase [Seconda | 97.77 | |
| KOG2112 | 206 | consensus Lysophospholipase [Lipid transport and m | 97.75 | |
| PF08840 | 213 | BAAT_C: BAAT / Acyl-CoA thioester hydrolase C term | 97.7 | |
| PF05990 | 233 | DUF900: Alpha/beta hydrolase of unknown function ( | 97.62 | |
| PF05057 | 217 | DUF676: Putative serine esterase (DUF676); InterPr | 97.49 | |
| PF00151 | 331 | Lipase: Lipase; InterPro: IPR013818 Triglyceride l | 97.46 | |
| KOG3975 | 301 | consensus Uncharacterized conserved protein [Funct | 97.46 | |
| PF06441 | 112 | EHN: Epoxide hydrolase N terminus; InterPro: IPR01 | 97.38 | |
| COG1073 | 299 | Hydrolases of the alpha/beta superfamily [General | 97.36 | |
| PRK04940 | 180 | hypothetical protein; Provisional | 97.31 | |
| COG4814 | 288 | Uncharacterized protein with an alpha/beta hydrola | 97.25 | |
| PF05705 | 240 | DUF829: Eukaryotic protein of unknown function (DU | 97.16 | |
| PF05577 | 434 | Peptidase_S28: Serine carboxypeptidase S28; InterP | 97.15 | |
| KOG2100 | 755 | consensus Dipeptidyl aminopeptidase [Posttranslati | 97.14 | |
| PF06057 | 192 | VirJ: Bacterial virulence protein (VirJ); InterPro | 97.1 | |
| KOG3253 | 784 | consensus Predicted alpha/beta hydrolase [General | 97.0 | |
| PF11339 | 581 | DUF3141: Protein of unknown function (DUF3141); In | 97.0 | |
| KOG1553 | 517 | consensus Predicted alpha/beta hydrolase BAT5 [Gen | 96.75 | |
| PF00756 | 251 | Esterase: Putative esterase; InterPro: IPR000801 T | 96.68 | |
| COG1075 | 336 | LipA Predicted acetyltransferases and hydrolases w | 96.68 | |
| PF10142 | 367 | PhoPQ_related: PhoPQ-activated pathogenicity-relat | 96.64 | |
| COG4099 | 387 | Predicted peptidase [General function prediction o | 96.6 | |
| COG2936 | 563 | Predicted acyl esterases [General function predict | 96.37 | |
| cd00312 | 493 | Esterase_lipase Esterases and lipases (includes fu | 96.18 | |
| KOG2182 | 514 | consensus Hydrolytic enzymes of the alpha/beta hyd | 96.17 | |
| PF04083 | 63 | Abhydro_lipase: Partial alpha/beta-hydrolase lipas | 95.97 | |
| PF05677 | 365 | DUF818: Chlamydia CHLPS protein (DUF818); InterPro | 95.9 | |
| KOG2551 | 230 | consensus Phospholipase/carboxyhydrolase [Amino ac | 95.78 | |
| PRK10439 | 411 | enterobactin/ferric enterobactin esterase; Provisi | 95.78 | |
| PF03403 | 379 | PAF-AH_p_II: Platelet-activating factor acetylhydr | 95.62 | |
| COG4782 | 377 | Uncharacterized protein conserved in bacteria [Fun | 95.53 | |
| PF02450 | 389 | LCAT: Lecithin:cholesterol acyltransferase; InterP | 95.46 | |
| PLN02213 | 319 | sinapoylglucose-malate O-sinapoyltransferase/ carb | 95.45 | |
| PF12048 | 310 | DUF3530: Protein of unknown function (DUF3530); In | 95.23 | |
| COG2272 | 491 | PnbA Carboxylesterase type B [Lipid metabolism] | 95.08 | |
| PLN02606 | 306 | palmitoyl-protein thioesterase | 95.02 | |
| PLN02209 | 437 | serine carboxypeptidase | 94.6 | |
| PLN03016 | 433 | sinapoylglucose-malate O-sinapoyltransferase | 94.48 | |
| COG3150 | 191 | Predicted esterase [General function prediction on | 94.44 | |
| COG1505 | 648 | Serine proteases of the peptidase family S9A [Amin | 93.89 | |
| PF00135 | 535 | COesterase: Carboxylesterase family The prints ent | 93.1 | |
| KOG1282 | 454 | consensus Serine carboxypeptidases (lysosomal cath | 92.95 | |
| PLN02633 | 314 | palmitoyl protein thioesterase family protein | 92.7 | |
| COG0627 | 316 | Predicted esterase [General function prediction on | 92.04 | |
| PF02089 | 279 | Palm_thioest: Palmitoyl protein thioesterase; Inte | 92.01 | |
| KOG2183 | 492 | consensus Prolylcarboxypeptidase (angiotensinase C | 91.37 | |
| PF10340 | 374 | DUF2424: Protein of unknown function (DUF2424); In | 89.75 | |
| KOG3724 | 973 | consensus Negative regulator of COPII vesicle form | 89.44 | |
| PF06259 | 177 | Abhydrolase_8: Alpha/beta hydrolase; InterPro: IPR | 89.3 | |
| KOG2541 | 296 | consensus Palmitoyl protein thioesterase [Lipid tr | 89.15 | |
| PF07082 | 250 | DUF1350: Protein of unknown function (DUF1350); In | 89.11 | |
| KOG3967 | 297 | consensus Uncharacterized conserved protein [Funct | 88.59 | |
| KOG4840 | 299 | consensus Predicted hydrolases or acyltransferases | 88.29 | |
| COG4553 | 415 | DepA Poly-beta-hydroxyalkanoate depolymerase [Lipi | 86.57 | |
| KOG3847 | 399 | consensus Phospholipase A2 (platelet-activating fa | 85.05 | |
| PLN03016 | 433 | sinapoylglucose-malate O-sinapoyltransferase | 83.84 | |
| PLN02517 | 642 | phosphatidylcholine-sterol O-acyltransferase | 83.16 | |
| KOG3101 | 283 | consensus Esterase D [General function prediction | 80.97 | |
| PLN02209 | 437 | serine carboxypeptidase | 80.15 |
| >KOG4178 consensus Soluble epoxide hydrolase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-34 Score=244.73 Aligned_cols=267 Identities=27% Similarity=0.443 Sum_probs=178.0
Q ss_pred ceeeEEeCcEEEEEEEcCCCCCCCceEEEEcCCCCCCccchhhHHHhhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCCHH
Q 022534 12 YGSYIKSGEYRWFVRETGSADSRLGTIVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTEN 91 (295)
Q Consensus 12 ~~~~~~~~~~~~~~~~~g~~~~~~~~vv~lHG~~~~~~~w~~~~~~l~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~ 91 (295)
...|++++|+++||.+.|+++ .|.|+++||++++|.+|+++++.|+.+||||+|+|+||+|.||.|... ..|+++
T Consensus 23 ~hk~~~~~gI~~h~~e~g~~~--gP~illlHGfPe~wyswr~q~~~la~~~~rviA~DlrGyG~Sd~P~~~---~~Yt~~ 97 (322)
T KOG4178|consen 23 SHKFVTYKGIRLHYVEGGPGD--GPIVLLLHGFPESWYSWRHQIPGLASRGYRVIAPDLRGYGFSDAPPHI---SEYTID 97 (322)
T ss_pred ceeeEEEccEEEEEEeecCCC--CCEEEEEccCCccchhhhhhhhhhhhcceEEEecCCCCCCCCCCCCCc---ceeeHH
Confidence 467889999999999988755 479999999999999999999999988899999999999999998643 478999
Q ss_pred HHHHHHHHHHHHhCCCCceEEEEecccchH-HHHHHHHhCcCccceeEEEcCCCCCCCCCch--h---hh------hhhc
Q 022534 92 EFHEELDKLLDVLEVKYPFFLVVQGFLVGS-YGLTWALKNPSRISKLAILNSPLTASSPLPG--L---FQ------QLRI 159 (295)
Q Consensus 92 ~~~~~l~~~~~~l~~~~~~~lv~~G~~~G~-~~~~~a~~~p~~v~~lil~~~p~~~~~~~~~--~---~~------~~~~ 159 (295)
.++.|+..++++++.++ ++++ ||.+|+ +|..+|+.+|++|+++++++.|...+...+- . +. ..+.
T Consensus 98 ~l~~di~~lld~Lg~~k-~~lv--gHDwGaivaw~la~~~Perv~~lv~~nv~~~~p~~~~~~~~~~~f~~~~y~~~fQ~ 174 (322)
T KOG4178|consen 98 ELVGDIVALLDHLGLKK-AFLV--GHDWGAIVAWRLALFYPERVDGLVTLNVPFPNPKLKPLDSSKAIFGKSYYICLFQE 174 (322)
T ss_pred HHHHHHHHHHHHhccce-eEEE--eccchhHHHHHHHHhChhhcceEEEecCCCCCcccchhhhhccccCccceeEeccc
Confidence 99999999999999886 5666 677776 5889999999999999999877652111110 0 00 0111
Q ss_pred ccchh--hhhhh-HHHHHHHHHhCCCcccccc----c-------ccc--ccccccccCCchh-HHHHHHHhcchhhhhHh
Q 022534 160 PLLGE--FTAQN-AIMAERFIEAGSPYVLKLD----K-------ADV--YRLPYLASSGPGF-ALLEAARKVNFKDISSR 222 (295)
Q Consensus 160 ~~~~~--~~~~~-~~~~~~~~~~~~~~~~~~~----~-------~~~--~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 222 (295)
+...+ +.... ..+...+...+.+...... . .++ +...+....-.|. -.+..++. .. .
T Consensus 175 ~~~~E~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~t~edi~~~~~~f~~~g~~gplNyyrn~~r----~w--~ 248 (322)
T KOG4178|consen 175 PGKPETELSKDDTEMLVKTFRTRKTPGPLIVPKQPNENPLWLTEEDIAFYVSKFQIDGFTGPLNYYRNFRR----NW--E 248 (322)
T ss_pred cCcchhhhccchhHHhHHhhhccccCCccccCCCCCCccchhhHHHHHHHHhccccccccccchhhHHHhh----Cc--h
Confidence 11100 00000 1111122221111100000 0 000 0000000000000 01111110 00 0
Q ss_pred hhcCcCCCCCCCcEEEEEeCCCCCCCcc-hHHHHHhcCCCCeEEEEecCCCCCCCCCChHHHHHHHHHHHHh
Q 022534 223 IGAGFSSGSWDKPVLVAWGISDKYLPQS-VAEEFQKGNPNVVKLQMIEGAGHMPQEDWPEKVVDGLRYFFLN 293 (295)
Q Consensus 223 ~~~~~~~~~~~~P~l~i~G~~D~~~~~~-~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 293 (295)
.......++++|+++|+|+.|.+.+.. ..+.+++.++...+.++++++||+++.|+|++++++|.+|+..
T Consensus 249 -a~~~~~~~i~iPv~fi~G~~D~v~~~p~~~~~~rk~vp~l~~~vv~~~~gH~vqqe~p~~v~~~i~~f~~~ 319 (322)
T KOG4178|consen 249 -AAPWALAKITIPVLFIWGDLDPVLPYPIFGELYRKDVPRLTERVVIEGIGHFVQQEKPQEVNQAILGFINS 319 (322)
T ss_pred -hccccccccccceEEEEecCcccccchhHHHHHHHhhccccceEEecCCcccccccCHHHHHHHHHHHHHh
Confidence 112223478999999999999998776 4566778888866899999999999999999999999999975
|
|
| >PLN03084 alpha/beta hydrolase fold protein; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-33 Score=251.37 Aligned_cols=269 Identities=36% Similarity=0.669 Sum_probs=171.1
Q ss_pred eEEeCcEEEEEEEcCCCCCCCceEEEEcCCCCCCccchhhHHHhhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCCHHHHH
Q 022534 15 YIKSGEYRWFVRETGSADSRLGTIVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFH 94 (295)
Q Consensus 15 ~~~~~~~~~~~~~~g~~~~~~~~vv~lHG~~~~~~~w~~~~~~l~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~ 94 (295)
-++.++++++|.+.|+++ +++||||||+++++..|+.+++.|++ +|+|+++|+||||.|+++.... ...|++++++
T Consensus 109 ~~~~~~~~~~y~~~G~~~--~~~ivllHG~~~~~~~w~~~~~~L~~-~~~Via~DlpG~G~S~~p~~~~-~~~ys~~~~a 184 (383)
T PLN03084 109 QASSDLFRWFCVESGSNN--NPPVLLIHGFPSQAYSYRKVLPVLSK-NYHAIAFDWLGFGFSDKPQPGY-GFNYTLDEYV 184 (383)
T ss_pred EEcCCceEEEEEecCCCC--CCeEEEECCCCCCHHHHHHHHHHHhc-CCEEEEECCCCCCCCCCCcccc-cccCCHHHHH
Confidence 366789999999988653 46999999999999999999999986 7999999999999999865321 2367899999
Q ss_pred HHHHHHHHHhCCCCceEEEEecccchHHHHHHHHhCcCccceeEEEcCCCCCCC-CCchhhhhhhcccchhhhhhhHH-H
Q 022534 95 EELDKLLDVLEVKYPFFLVVQGFLVGSYGLTWALKNPSRISKLAILNSPLTASS-PLPGLFQQLRIPLLGEFTAQNAI-M 172 (295)
Q Consensus 95 ~~l~~~~~~l~~~~~~~lv~~G~~~G~~~~~~a~~~p~~v~~lil~~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-~ 172 (295)
+++.++++++++++ ++|+|+|+ +|.+++.+|.++|++|+++|+++++..... ..+.....+...+.......... .
T Consensus 185 ~~l~~~i~~l~~~~-~~LvG~s~-GG~ia~~~a~~~P~~v~~lILi~~~~~~~~~~~p~~l~~~~~~l~~~~~~~~~~~~ 262 (383)
T PLN03084 185 SSLESLIDELKSDK-VSLVVQGY-FSPPVVKYASAHPDKIKKLILLNPPLTKEHAKLPSTLSEFSNFLLGEIFSQDPLRA 262 (383)
T ss_pred HHHHHHHHHhCCCC-ceEEEECH-HHHHHHHHHHhChHhhcEEEEECCCCccccccchHHHHHHHHHHhhhhhhcchHHH
Confidence 99999999999875 67775553 456788899999999999999987643211 01111111111011000000000 0
Q ss_pred HHHHHHhCCCccccccccccccccccccCCchhHH---HHHHHhcchhhhhHhhhcCcCCCCCCCcEEEEEeCCCCCCCc
Q 022534 173 AERFIEAGSPYVLKLDKADVYRLPYLASSGPGFAL---LEAARKVNFKDISSRIGAGFSSGSWDKPVLVAWGISDKYLPQ 249 (295)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~~~ 249 (295)
...++....+..+.......+..++......+..+ ...+.. .++.....+...+....+++|+|+|+|++|.+++.
T Consensus 263 ~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~l~~~~r~~~~-~l~~~~~~l~~~l~~~~i~vPvLiI~G~~D~~v~~ 341 (383)
T PLN03084 263 SDKALTSCGPYAMKEDDAMVYRRPYLTSGSSGFALNAISRSMKK-ELKKYIEEMRSILTDKNWKTPITVCWGLRDRWLNY 341 (383)
T ss_pred HhhhhcccCccCCCHHHHHHHhccccCCcchHHHHHHHHHHhhc-ccchhhHHHHhhhccccCCCCEEEEeeCCCCCcCH
Confidence 00111000010011111111111111111111111 111110 11111111111111236799999999999999999
Q ss_pred chHHHHHhcCCCCeEEEEecCCCCCCCCCChHHHHHHHHHHHH
Q 022534 250 SVAEEFQKGNPNVVKLQMIEGAGHMPQEDWPEKVVDGLRYFFL 292 (295)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~ 292 (295)
+.++++++.. + ++++++++|||++++|+|+++++.|++|+.
T Consensus 342 ~~~~~~a~~~-~-a~l~vIp~aGH~~~~E~Pe~v~~~I~~Fl~ 382 (383)
T PLN03084 342 DGVEDFCKSS-Q-HKLIELPMAGHHVQEDCGEELGGIISGILS 382 (383)
T ss_pred HHHHHHHHhc-C-CeEEEECCCCCCcchhCHHHHHHHHHHHhh
Confidence 8888888763 4 699999999999999999999999999985
|
|
| >PRK00870 haloalkane dehalogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-33 Score=245.82 Aligned_cols=271 Identities=27% Similarity=0.387 Sum_probs=174.6
Q ss_pred cccc--cccccceeeEEeCc-----EEEEEEEcCCCCCCCceEEEEcCCCCCCccchhhHHHhhhCCCeEEEeCCCCCCC
Q 022534 3 SRIE--NKGREYGSYIKSGE-----YRWFVRETGSADSRLGTIVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGFGF 75 (295)
Q Consensus 3 ~~~~--~~~~~~~~~~~~~~-----~~~~~~~~g~~~~~~~~vv~lHG~~~~~~~w~~~~~~l~~~~~~via~Dl~G~G~ 75 (295)
+++| +.+|--+.++++++ ++++|.+.|+++ .|+|||+||+++++..|..+++.|.+.||+|+++|+||||+
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~y~~~G~~~--~~~lvliHG~~~~~~~w~~~~~~L~~~gy~vi~~Dl~G~G~ 86 (302)
T PRK00870 9 SRFENLPDYPFAPHYVDVDDGDGGPLRMHYVDEGPAD--GPPVLLLHGEPSWSYLYRKMIPILAAAGHRVIAPDLIGFGR 86 (302)
T ss_pred ccccCCcCCCCCceeEeecCCCCceEEEEEEecCCCC--CCEEEEECCCCCchhhHHHHHHHHHhCCCEEEEECCCCCCC
Confidence 5778 77888899999999 999999988653 36999999999999999999999986689999999999999
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCceEEEEecccch-HHHHHHHHhCcCccceeEEEcCCCCCCCC-Cchh
Q 022534 76 SDKPEKGYDDFDFTENEFHEELDKLLDVLEVKYPFFLVVQGFLVG-SYGLTWALKNPSRISKLAILNSPLTASSP-LPGL 153 (295)
Q Consensus 76 S~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~~lv~~G~~~G-~~~~~~a~~~p~~v~~lil~~~p~~~~~~-~~~~ 153 (295)
|+.+.. ..+|+.+++++++.+++++++.++ ++++ |||+| .++..+|.++|++|++++++++....... .+..
T Consensus 87 S~~~~~---~~~~~~~~~a~~l~~~l~~l~~~~-v~lv--GhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~ 160 (302)
T PRK00870 87 SDKPTR---REDYTYARHVEWMRSWFEQLDLTD-VTLV--CQDWGGLIGLRLAAEHPDRFARLVVANTGLPTGDGPMPDA 160 (302)
T ss_pred CCCCCC---cccCCHHHHHHHHHHHHHHcCCCC-EEEE--EEChHHHHHHHHHHhChhheeEEEEeCCCCCCccccchHH
Confidence 987532 225688999999999999998875 6676 67766 57888999999999999998653211110 0111
Q ss_pred hhhhhcccchhhhhhhHHHHHHHHHhCCCcccccccccccccccccc-CCchhHHHHHHHhc--------chhhhhHhhh
Q 022534 154 FQQLRIPLLGEFTAQNAIMAERFIEAGSPYVLKLDKADVYRLPYLAS-SGPGFALLEAARKV--------NFKDISSRIG 224 (295)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~--------~~~~~~~~~~ 224 (295)
+..... +.... . ......+................+..++... .............. ...+....
T Consensus 161 ~~~~~~-~~~~~-~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 234 (302)
T PRK00870 161 FWAWRA-FSQYS-P--VLPVGRLVNGGTVRDLSDAVRAAYDAPFPDESYKAGARAFPLLVPTSPDDPAVAANRAAWAV-- 234 (302)
T ss_pred Hhhhhc-ccccC-c--hhhHHHHhhccccccCCHHHHHHhhcccCChhhhcchhhhhhcCCCCCCCcchHHHHHHHHh--
Confidence 111000 00000 0 0000001100000000000000000000000 00000000000000 00000111
Q ss_pred cCcCCCCCCCcEEEEEeCCCCCCCcchHHHHHhcCCCCeE---EEEecCCCCCCCCCChHHHHHHHHHHHHh
Q 022534 225 AGFSSGSWDKPVLVAWGISDKYLPQSVAEEFQKGNPNVVK---LQMIEGAGHMPQEDWPEKVVDGLRYFFLN 293 (295)
Q Consensus 225 ~~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~---~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 293 (295)
..++++|+++|+|++|++++... +++.+.+++ ++ +.+++++||++++|+|++|++.|.+|+..
T Consensus 235 ----l~~i~~P~lii~G~~D~~~~~~~-~~~~~~~~~-~~~~~~~~i~~~gH~~~~e~p~~~~~~l~~fl~~ 300 (302)
T PRK00870 235 ----LERWDKPFLTAFSDSDPITGGGD-AILQKRIPG-AAGQPHPTIKGAGHFLQEDSGEELAEAVLEFIRA 300 (302)
T ss_pred ----hhcCCCceEEEecCCCCcccCch-HHHHhhccc-ccccceeeecCCCccchhhChHHHHHHHHHHHhc
Confidence 13679999999999999998766 888888886 44 88999999999999999999999999975
|
|
| >TIGR02240 PHA_depoly_arom poly(3-hydroxyalkanoate) depolymerase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-33 Score=241.13 Aligned_cols=261 Identities=15% Similarity=0.159 Sum_probs=169.2
Q ss_pred ccceeeEEeCcEEEEEEEcCCCCCCCceEEEEcCCCCCCccchhhHHHhhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCC
Q 022534 10 REYGSYIKSGEYRWFVRETGSADSRLGTIVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFT 89 (295)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~vv~lHG~~~~~~~w~~~~~~l~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~ 89 (295)
|-|+++++++|++++|...+.++ .+++|||+||+++++..|..+++.|.+ +|+|+++|+||||+|+.+.. .|+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~-~~~plvllHG~~~~~~~w~~~~~~L~~-~~~vi~~Dl~G~G~S~~~~~-----~~~ 73 (276)
T TIGR02240 1 PFIFRTIDLDGQSIRTAVRPGKE-GLTPLLIFNGIGANLELVFPFIEALDP-DLEVIAFDVPGVGGSSTPRH-----PYR 73 (276)
T ss_pred CeeEEEeccCCcEEEEEEecCCC-CCCcEEEEeCCCcchHHHHHHHHHhcc-CceEEEECCCCCCCCCCCCC-----cCc
Confidence 45889999999999998764222 246999999999999999999999986 79999999999999986532 357
Q ss_pred HHHHHHHHHHHHHHhCCCCceEEEEecccch-HHHHHHHHhCcCccceeEEEcCCCCCC--CCCchhhhhhhcccchhhh
Q 022534 90 ENEFHEELDKLLDVLEVKYPFFLVVQGFLVG-SYGLTWALKNPSRISKLAILNSPLTAS--SPLPGLFQQLRIPLLGEFT 166 (295)
Q Consensus 90 ~~~~~~~l~~~~~~l~~~~~~~lv~~G~~~G-~~~~~~a~~~p~~v~~lil~~~p~~~~--~~~~~~~~~~~~~~~~~~~ 166 (295)
.+++++++.++++.+++++ ++|+ |||+| .+++.+|.++|++|+++|+++++.... ...+........+ ..+.
T Consensus 74 ~~~~~~~~~~~i~~l~~~~-~~Lv--G~S~GG~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~--~~~~ 148 (276)
T TIGR02240 74 FPGLAKLAARMLDYLDYGQ-VNAI--GVSWGGALAQQFAHDYPERCKKLILAATAAGAVMVPGKPKVLMMMASP--RRYI 148 (276)
T ss_pred HHHHHHHHHHHHHHhCcCc-eEEE--EECHHHHHHHHHHHHCHHHhhheEEeccCCccccCCCchhHHHHhcCc--hhhh
Confidence 8899999999999998875 6777 66665 578899999999999999997654321 1111100000000 0000
Q ss_pred hh-hH-HHHHHHHHhCCCccccccccccccccccccCCchhHHHHHHHhcchhhhhHhhhcCcCCCCCCCcEEEEEeCCC
Q 022534 167 AQ-NA-IMAERFIEAGSPYVLKLDKADVYRLPYLASSGPGFALLEAARKVNFKDISSRIGAGFSSGSWDKPVLVAWGISD 244 (295)
Q Consensus 167 ~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D 244 (295)
.. .. .....+... ......................+. .......... ..... .++++||+|+|+|++|
T Consensus 149 ~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~-~~~~~------l~~i~~P~lii~G~~D 218 (276)
T TIGR02240 149 QPSHGIHIAPDIYGG--AFRRDPELAMAHASKVRSGGKLGY-YWQLFAGLGW-TSIHW------LHKIQQPTLVLAGDDD 218 (276)
T ss_pred ccccccchhhhhccc--eeeccchhhhhhhhhcccCCCchH-HHHHHHHcCC-chhhH------hhcCCCCEEEEEeCCC
Confidence 00 00 000000000 000000000000000000000000 0000000000 00111 1377999999999999
Q ss_pred CCCCcchHHHHHhcCCCCeEEEEecCCCCCCCCCChHHHHHHHHHHHHhc
Q 022534 245 KYLPQSVAEEFQKGNPNVVKLQMIEGAGHMPQEDWPEKVVDGLRYFFLNY 294 (295)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~ 294 (295)
++++++.++++.+.+++ ++++++++ ||++++|+|++|++.|.+|+++.
T Consensus 219 ~~v~~~~~~~l~~~~~~-~~~~~i~~-gH~~~~e~p~~~~~~i~~fl~~~ 266 (276)
T TIGR02240 219 PIIPLINMRLLAWRIPN-AELHIIDD-GHLFLITRAEAVAPIIMKFLAEE 266 (276)
T ss_pred CcCCHHHHHHHHHhCCC-CEEEEEcC-CCchhhccHHHHHHHHHHHHHHh
Confidence 99999999999999997 79999975 99999999999999999999863
|
This family consists of the polyhydroxyalkanoic acid (PHA) depolymerase of Pseudomonas oleovorans, Pseudomonas putida BM01, and related species. This enzyme is part of polyester storage and mobilization system as in many bacteria. However, species containing this enzyme are unusual in their capacity to produce aromatic polyesters when grown on carbon sources such as benzoic acid or phenylacetic acid. |
| >PLN02824 hydrolase, alpha/beta fold family protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.2e-33 Score=241.11 Aligned_cols=266 Identities=20% Similarity=0.272 Sum_probs=168.4
Q ss_pred eeeEEeCcEEEEEEEcCCCCCCCceEEEEcCCCCCCccchhhHHHhhhCCCeEEEeCCCCCCCCCCCCCCC--CCCCCCH
Q 022534 13 GSYIKSGEYRWFVRETGSADSRLGTIVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGY--DDFDFTE 90 (295)
Q Consensus 13 ~~~~~~~~~~~~~~~~g~~~~~~~~vv~lHG~~~~~~~w~~~~~~l~~~~~~via~Dl~G~G~S~~~~~~~--~~~~~~~ 90 (295)
..+++.+|.+++|.+.|++ .++|||+||+++++..|..+++.|++ .|+|+++|+||||.|+.+.... ....|++
T Consensus 10 ~~~~~~~~~~i~y~~~G~~---~~~vlllHG~~~~~~~w~~~~~~L~~-~~~vi~~DlpG~G~S~~~~~~~~~~~~~~~~ 85 (294)
T PLN02824 10 TRTWRWKGYNIRYQRAGTS---GPALVLVHGFGGNADHWRKNTPVLAK-SHRVYAIDLLGYGYSDKPNPRSAPPNSFYTF 85 (294)
T ss_pred CceEEEcCeEEEEEEcCCC---CCeEEEECCCCCChhHHHHHHHHHHh-CCeEEEEcCCCCCCCCCCccccccccccCCH
Confidence 4588899999999998853 25899999999999999999999986 5899999999999999754210 0225788
Q ss_pred HHHHHHHHHHHHHhCCCCceEEEEecccch-HHHHHHHHhCcCccceeEEEcCCCCCC--CCCchhhh----hhhccc--
Q 022534 91 NEFHEELDKLLDVLEVKYPFFLVVQGFLVG-SYGLTWALKNPSRISKLAILNSPLTAS--SPLPGLFQ----QLRIPL-- 161 (295)
Q Consensus 91 ~~~~~~l~~~~~~l~~~~~~~lv~~G~~~G-~~~~~~a~~~p~~v~~lil~~~p~~~~--~~~~~~~~----~~~~~~-- 161 (295)
+++++++.+++++++.++ ++++ |||+| .+++.+|+++|++|+++|+++++.... ...+.... .+...+
T Consensus 86 ~~~a~~l~~~l~~l~~~~-~~lv--GhS~Gg~va~~~a~~~p~~v~~lili~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (294)
T PLN02824 86 ETWGEQLNDFCSDVVGDP-AFVI--CNSVGGVVGLQAAVDAPELVRGVMLINISLRGLHIKKQPWLGRPFIKAFQNLLRE 162 (294)
T ss_pred HHHHHHHHHHHHHhcCCC-eEEE--EeCHHHHHHHHHHHhChhheeEEEEECCCcccccccccchhhhHHHHHHHHHHhc
Confidence 999999999999998864 6777 67765 578899999999999999997643211 11111000 000000
Q ss_pred --chhhhhh---hHHHHHHHHHh--CCCccccccccccccccccccCCchhHHHHHHHhcchhhhhHhhhcCcCCCCCCC
Q 022534 162 --LGEFTAQ---NAIMAERFIEA--GSPYVLKLDKADVYRLPYLASSGPGFALLEAARKVNFKDISSRIGAGFSSGSWDK 234 (295)
Q Consensus 162 --~~~~~~~---~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (295)
....... .......++.. .....+.......+..+... ......+............... ..++++
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~------l~~i~~ 235 (294)
T PLN02824 163 TAVGKAFFKSVATPETVKNILCQCYHDDSAVTDELVEAILRPGLE-PGAVDVFLDFISYSGGPLPEEL------LPAVKC 235 (294)
T ss_pred hhHHHHHHHhhcCHHHHHHHHHHhccChhhccHHHHHHHHhccCC-chHHHHHHHHhccccccchHHH------HhhcCC
Confidence 0000000 00000011000 00000000000000000000 0000011111000000000011 136799
Q ss_pred cEEEEEeCCCCCCCcchHHHHHhcCCCCeEEEEecCCCCCCCCCChHHHHHHHHHHHHh
Q 022534 235 PVLVAWGISDKYLPQSVAEEFQKGNPNVVKLQMIEGAGHMPQEDWPEKVVDGLRYFFLN 293 (295)
Q Consensus 235 P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 293 (295)
|+|+|+|++|++++.+.++.+.+..++ +++++++++||++++|+|++|++.|.+|+.+
T Consensus 236 P~lvi~G~~D~~~~~~~~~~~~~~~~~-~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 293 (294)
T PLN02824 236 PVLIAWGEKDPWEPVELGRAYANFDAV-EDFIVLPGVGHCPQDEAPELVNPLIESFVAR 293 (294)
T ss_pred CeEEEEecCCCCCChHHHHHHHhcCCc-cceEEeCCCCCChhhhCHHHHHHHHHHHHhc
Confidence 999999999999999888888887776 6999999999999999999999999999975
|
|
| >PRK03204 haloalkane dehalogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-32 Score=237.84 Aligned_cols=268 Identities=22% Similarity=0.394 Sum_probs=169.2
Q ss_pred cccccceeeEEeCcEEEEEEEcCCCCCCCceEEEEcCCCCCCccchhhHHHhhhCCCeEEEeCCCCCCCCCCCCCCCCCC
Q 022534 7 NKGREYGSYIKSGEYRWFVRETGSADSRLGTIVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDF 86 (295)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~vv~lHG~~~~~~~w~~~~~~l~~~~~~via~Dl~G~G~S~~~~~~~~~~ 86 (295)
|..+-.+.|++++|.++||.+.|. .++|||+||++.++..|..+++.|.+ +|+|+++|+||||.|+++.. .
T Consensus 10 ~~~~~~~~~~~~~~~~i~y~~~G~----~~~iv~lHG~~~~~~~~~~~~~~l~~-~~~vi~~D~~G~G~S~~~~~----~ 80 (286)
T PRK03204 10 QLYPFESRWFDSSRGRIHYIDEGT----GPPILLCHGNPTWSFLYRDIIVALRD-RFRCVAPDYLGFGLSERPSG----F 80 (286)
T ss_pred ccccccceEEEcCCcEEEEEECCC----CCEEEEECCCCccHHHHHHHHHHHhC-CcEEEEECCCCCCCCCCCCc----c
Confidence 577788999999999999999884 25899999999999999999999985 79999999999999987542 2
Q ss_pred CCCHHHHHHHHHHHHHHhCCCCceEEEEecccch-HHHHHHHHhCcCccceeEEEcCCCCCCCCCch-hhhhhh--cccc
Q 022534 87 DFTENEFHEELDKLLDVLEVKYPFFLVVQGFLVG-SYGLTWALKNPSRISKLAILNSPLTASSPLPG-LFQQLR--IPLL 162 (295)
Q Consensus 87 ~~~~~~~~~~l~~~~~~l~~~~~~~lv~~G~~~G-~~~~~~a~~~p~~v~~lil~~~p~~~~~~~~~-~~~~~~--~~~~ 162 (295)
.|+.+++++++.+++++++.++ ++++ |||+| .++..+|+.+|++|+++|+++++......... .+.... .+..
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~-~~lv--G~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (286)
T PRK03204 81 GYQIDEHARVIGEFVDHLGLDR-YLSM--GQDWGGPISMAVAVERADRVRGVVLGNTWFWPADTLAMKAFSRVMSSPPVQ 157 (286)
T ss_pred ccCHHHHHHHHHHHHHHhCCCC-EEEE--EECccHHHHHHHHHhChhheeEEEEECccccCCCchhHHHHHHHhccccch
Confidence 4678999999999999998875 6676 66665 57888999999999999988654321110000 000000 0000
Q ss_pred hhhhhhhHHHHHHHHHhCCCccccccccccccccccccCCchh--HHHHHHHh-cchhhhhHhhhcCcCCCCCCCcEEEE
Q 022534 163 GEFTAQNAIMAERFIEAGSPYVLKLDKADVYRLPYLASSGPGF--ALLEAARK-VNFKDISSRIGAGFSSGSWDKPVLVA 239 (295)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~P~l~i 239 (295)
.... .......++................+.. ....+.. .+...... ......+..+...+.....++||++|
T Consensus 158 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PtliI 233 (286)
T PRK03204 158 YAIL-RRNFFVERLIPAGTEHRPSSAVMAHYRA---VQPNAAARRGVAEMPKQILAARPLLARLAREVPATLGTKPTLLV 233 (286)
T ss_pred hhhh-hhhHHHHHhccccccCCCCHHHHHHhcC---CCCCHHHHHHHHHHHHhcchhhHHHHHhhhhhhhhcCCCCeEEE
Confidence 0000 0011111111110000000000000000 0000000 00000000 00011111111111111128999999
Q ss_pred EeCCCCCCCcc-hHHHHHhcCCCCeEEEEecCCCCCCCCCChHHHHHHHHHHH
Q 022534 240 WGISDKYLPQS-VAEEFQKGNPNVVKLQMIEGAGHMPQEDWPEKVVDGLRYFF 291 (295)
Q Consensus 240 ~G~~D~~~~~~-~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl 291 (295)
+|++|.++++. ..+.+.+.+++ .++++++++||++++|+|++|++.|.+||
T Consensus 234 ~G~~D~~~~~~~~~~~~~~~ip~-~~~~~i~~aGH~~~~e~Pe~~~~~i~~~~ 285 (286)
T PRK03204 234 WGMKDVAFRPKTILPRLRATFPD-HVLVELPNAKHFIQEDAPDRIAAAIIERF 285 (286)
T ss_pred ecCCCcccCcHHHHHHHHHhcCC-CeEEEcCCCcccccccCHHHHHHHHHHhc
Confidence 99999987554 56888899997 69999999999999999999999999997
|
|
| >PRK03592 haloalkane dehalogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-32 Score=237.75 Aligned_cols=265 Identities=25% Similarity=0.416 Sum_probs=163.3
Q ss_pred eeeEEeCcEEEEEEEcCCCCCCCceEEEEcCCCCCCccchhhHHHhhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCCHHH
Q 022534 13 GSYIKSGEYRWFVRETGSADSRLGTIVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTENE 92 (295)
Q Consensus 13 ~~~~~~~~~~~~~~~~g~~~~~~~~vv~lHG~~~~~~~w~~~~~~l~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~ 92 (295)
..+++++|.+++|.+.|++ ++|||+||+++++..|..+++.|+++ |+||++|+||||.|+.+.. .|+.++
T Consensus 9 ~~~~~~~g~~i~y~~~G~g----~~vvllHG~~~~~~~w~~~~~~L~~~-~~via~D~~G~G~S~~~~~-----~~~~~~ 78 (295)
T PRK03592 9 MRRVEVLGSRMAYIETGEG----DPIVFLHGNPTSSYLWRNIIPHLAGL-GRCLAPDLIGMGASDKPDI-----DYTFAD 78 (295)
T ss_pred ceEEEECCEEEEEEEeCCC----CEEEEECCCCCCHHHHHHHHHHHhhC-CEEEEEcCCCCCCCCCCCC-----CCCHHH
Confidence 4578889999999998853 58999999999999999999999874 7999999999999997642 358899
Q ss_pred HHHHHHHHHHHhCCCCceEEEEecccch-HHHHHHHHhCcCccceeEEEcCCCCCCCC--Cchhh----hhhhcccchh-
Q 022534 93 FHEELDKLLDVLEVKYPFFLVVQGFLVG-SYGLTWALKNPSRISKLAILNSPLTASSP--LPGLF----QQLRIPLLGE- 164 (295)
Q Consensus 93 ~~~~l~~~~~~l~~~~~~~lv~~G~~~G-~~~~~~a~~~p~~v~~lil~~~p~~~~~~--~~~~~----~~~~~~~~~~- 164 (295)
+++|+.+++++++.++ ++++ |||+| .+++.+|.++|++|+++|+++++...... .+... ..++.+....
T Consensus 79 ~a~dl~~ll~~l~~~~-~~lv--GhS~Gg~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (295)
T PRK03592 79 HARYLDAWFDALGLDD-VVLV--GHDWGSALGFDWAARHPDRVRGIAFMEAIVRPMTWDDFPPAVRELFQALRSPGEGEE 155 (295)
T ss_pred HHHHHHHHHHHhCCCC-eEEE--EECHHHHHHHHHHHhChhheeEEEEECCCCCCcchhhcchhHHHHHHHHhCcccccc
Confidence 9999999999999875 6777 66665 57889999999999999999763322110 01000 0001000000
Q ss_pred hhhhhHHHHHHHHHhCCCccccccccccccccccccCCchhHHHHHHHhcch----h---hhhHhhhcCcCCCCCCCcEE
Q 022534 165 FTAQNAIMAERFIEAGSPYVLKLDKADVYRLPYLASSGPGFALLEAARKVNF----K---DISSRIGAGFSSGSWDKPVL 237 (295)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~---~~~~~~~~~~~~~~~~~P~l 237 (295)
...........+........+.......++.++.. ................ . ......... ..+++||+|
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--l~~i~~P~l 232 (295)
T PRK03592 156 MVLEENVFIERVLPGSILRPLSDEEMAVYRRPFPT-PESRRPTLSWPRELPIDGEPADVVALVEEYAQW--LATSDVPKL 232 (295)
T ss_pred cccchhhHHhhcccCcccccCCHHHHHHHHhhcCC-chhhhhhhhhhhhcCCCCcchhhHhhhhHhHHH--hccCCCCeE
Confidence 00000000000100000000000000000000000 0000001111100000 0 000001000 136799999
Q ss_pred EEEeCCCCCCCcchHHHH-HhcCCCCeEEEEecCCCCCCCCCChHHHHHHHHHHHHhc
Q 022534 238 VAWGISDKYLPQSVAEEF-QKGNPNVVKLQMIEGAGHMPQEDWPEKVVDGLRYFFLNY 294 (295)
Q Consensus 238 ~i~G~~D~~~~~~~~~~~-~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~ 294 (295)
+|+|++|+++++....++ .+..++ .+++++++|||++++|+|++|++.|.+|+.+.
T Consensus 233 ii~G~~D~~~~~~~~~~~~~~~~~~-~~~~~i~~~gH~~~~e~p~~v~~~i~~fl~~~ 289 (295)
T PRK03592 233 LINAEPGAILTTGAIRDWCRSWPNQ-LEITVFGAGLHFAQEDSPEEIGAAIAAWLRRL 289 (295)
T ss_pred EEeccCCcccCcHHHHHHHHHhhhh-cceeeccCcchhhhhcCHHHHHHHHHHHHHHh
Confidence 999999999955555455 455665 79999999999999999999999999999863
|
|
| >PLN02679 hydrolase, alpha/beta fold family protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-31 Score=238.93 Aligned_cols=264 Identities=23% Similarity=0.294 Sum_probs=162.7
Q ss_pred eeeEEeCcE-EEEEEEcCCCC--CCCceEEEEcCCCCCCccchhhHHHhhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCC
Q 022534 13 GSYIKSGEY-RWFVRETGSAD--SRLGTIVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFT 89 (295)
Q Consensus 13 ~~~~~~~~~-~~~~~~~g~~~--~~~~~vv~lHG~~~~~~~w~~~~~~l~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~ 89 (295)
+.++..+|. +++|.+.|+++ +..|+|||+||+++++..|..+++.|++ +|+|+++|+||||+|+++.. ..|+
T Consensus 63 ~~~~~~~g~~~i~Y~~~G~g~~~~~gp~lvllHG~~~~~~~w~~~~~~L~~-~~~via~Dl~G~G~S~~~~~----~~~~ 137 (360)
T PLN02679 63 CKKWKWKGEYSINYLVKGSPEVTSSGPPVLLVHGFGASIPHWRRNIGVLAK-NYTVYAIDLLGFGASDKPPG----FSYT 137 (360)
T ss_pred CceEEECCceeEEEEEecCcccCCCCCeEEEECCCCCCHHHHHHHHHHHhc-CCEEEEECCCCCCCCCCCCC----cccc
Confidence 456666776 99999988641 1246899999999999999999999986 79999999999999997532 2468
Q ss_pred HHHHHHHHHHHHHHhCCCCceEEEEecccchH-HHHHHHH-hCcCccceeEEEcCCCCCCCC--Cchhhhhhhcccc---
Q 022534 90 ENEFHEELDKLLDVLEVKYPFFLVVQGFLVGS-YGLTWAL-KNPSRISKLAILNSPLTASSP--LPGLFQQLRIPLL--- 162 (295)
Q Consensus 90 ~~~~~~~l~~~~~~l~~~~~~~lv~~G~~~G~-~~~~~a~-~~p~~v~~lil~~~p~~~~~~--~~~~~~~~~~~~~--- 162 (295)
++++++++.++++++++++ ++|+ |||+|+ +++.+|+ .+|++|+++|+++++...... ..........+..
T Consensus 138 ~~~~a~~l~~~l~~l~~~~-~~lv--GhS~Gg~ia~~~a~~~~P~rV~~LVLi~~~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (360)
T PLN02679 138 METWAELILDFLEEVVQKP-TVLI--GNSVGSLACVIAASESTRDLVRGLVLLNCAGGMNNKAVVDDWRIKLLLPLLWLI 214 (360)
T ss_pred HHHHHHHHHHHHHHhcCCC-eEEE--EECHHHHHHHHHHHhcChhhcCEEEEECCccccccccccchHHHhhhcchHHHH
Confidence 8999999999999998875 6676 777775 4566666 579999999999765322110 0000000000000
Q ss_pred hhhhhhh------------HHHHHHHHHh--CCCccccccccccccccccccCCchh-HHHHHHHhcchhhhhHhhhcCc
Q 022534 163 GEFTAQN------------AIMAERFIEA--GSPYVLKLDKADVYRLPYLASSGPGF-ALLEAARKVNFKDISSRIGAGF 227 (295)
Q Consensus 163 ~~~~~~~------------~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 227 (295)
..+.... .....+++.. ..+..+.....+.+..+.. ..... .+..........+....
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~----- 287 (360)
T PLN02679 215 DFLLKQRGIASALFNRVKQRDNLKNILLSVYGNKEAVDDELVEIIRGPAD--DEGALDAFVSIVTGPPGPNPIKL----- 287 (360)
T ss_pred HHHhhchhhHHHHHHHhcCHHHHHHHHHHhccCcccCCHHHHHHHHhhcc--CCChHHHHHHHHhcCCCCCHHHH-----
Confidence 0000000 0000011100 0000000000000000000 00000 11111100000011111
Q ss_pred CCCCCCCcEEEEEeCCCCCCCcch-----HHHHHhcCCCCeEEEEecCCCCCCCCCChHHHHHHHHHHHHh
Q 022534 228 SSGSWDKPVLVAWGISDKYLPQSV-----AEEFQKGNPNVVKLQMIEGAGHMPQEDWPEKVVDGLRYFFLN 293 (295)
Q Consensus 228 ~~~~~~~P~l~i~G~~D~~~~~~~-----~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 293 (295)
..++++|||+|+|++|++++++. ...+.+.+++ ++++++++|||++++|+|++|++.|.+||.+
T Consensus 288 -l~~i~~PtLii~G~~D~~~p~~~~~~~~~~~l~~~ip~-~~l~~i~~aGH~~~~E~Pe~~~~~I~~FL~~ 356 (360)
T PLN02679 288 -IPRISLPILVLWGDQDPFTPLDGPVGKYFSSLPSQLPN-VTLYVLEGVGHCPHDDRPDLVHEKLLPWLAQ 356 (360)
T ss_pred -hhhcCCCEEEEEeCCCCCcCchhhHHHHHHhhhccCCc-eEEEEcCCCCCCccccCHHHHHHHHHHHHHh
Confidence 13678999999999999998763 2346667887 7999999999999999999999999999986
|
|
| >PLN02965 Probable pheophorbidase | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.8e-32 Score=229.91 Aligned_cols=239 Identities=16% Similarity=0.198 Sum_probs=151.3
Q ss_pred eEEEEcCCCCCCccchhhHHHhhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCceEEEEec
Q 022534 37 TIVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEELDKLLDVLEVKYPFFLVVQG 116 (295)
Q Consensus 37 ~vv~lHG~~~~~~~w~~~~~~l~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~~lv~~G 116 (295)
+|||+||++.++..|+.+++.|++.+|+|+++|+||||.|+.+.. ..|+.+++++|+.+++++++..++++|+ |
T Consensus 5 ~vvllHG~~~~~~~w~~~~~~L~~~~~~via~Dl~G~G~S~~~~~----~~~~~~~~a~dl~~~l~~l~~~~~~~lv--G 78 (255)
T PLN02965 5 HFVFVHGASHGAWCWYKLATLLDAAGFKSTCVDLTGAGISLTDSN----TVSSSDQYNRPLFALLSDLPPDHKVILV--G 78 (255)
T ss_pred EEEEECCCCCCcCcHHHHHHHHhhCCceEEEecCCcCCCCCCCcc----ccCCHHHHHHHHHHHHHhcCCCCCEEEE--e
Confidence 699999999999999999999966689999999999999986532 2457899999999999999875457777 7
Q ss_pred ccch-HHHHHHHHhCcCccceeEEEcCCCCCCCCCc-hhhhh-hh-cccchhhhhhhHHHHHHHHHhCCCcccc--cccc
Q 022534 117 FLVG-SYGLTWALKNPSRISKLAILNSPLTASSPLP-GLFQQ-LR-IPLLGEFTAQNAIMAERFIEAGSPYVLK--LDKA 190 (295)
Q Consensus 117 ~~~G-~~~~~~a~~~p~~v~~lil~~~p~~~~~~~~-~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~ 190 (295)
||+| .++..+|.++|++|+++|++++......... ..... .. ........ .......... ....
T Consensus 79 hSmGG~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~ 148 (255)
T PLN02965 79 HSIGGGSVTEALCKFTDKISMAIYVAAAMVKPGSIISPRLKNVMEGTEKIWDYT----------FGEGPDKPPTGIMMKP 148 (255)
T ss_pred cCcchHHHHHHHHhCchheeEEEEEccccCCCCCCccHHHHhhhhccccceeee----------eccCCCCCcchhhcCH
Confidence 7776 4688899999999999999876422111000 00000 00 00000000 0000000000 0000
Q ss_pred ccccccccccCCc-hhHHHHH-HHhcchhhh--hHhhhcCcCCCCCCCcEEEEEeCCCCCCCcchHHHHHhcCCCCeEEE
Q 022534 191 DVYRLPYLASSGP-GFALLEA-ARKVNFKDI--SSRIGAGFSSGSWDKPVLVAWGISDKYLPQSVAEEFQKGNPNVVKLQ 266 (295)
Q Consensus 191 ~~~~~~~~~~~~~-~~~~~~~-~~~~~~~~~--~~~~~~~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~ 266 (295)
......+...... ....... ......... ...+. ....++++|+++|+|++|.+++++..+.+++.+++ ++++
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~i~vP~lvi~g~~D~~~~~~~~~~~~~~~~~-a~~~ 225 (255)
T PLN02965 149 EFVRHYYYNQSPLEDYTLSSKLLRPAPVRAFQDLDKLP--PNPEAEKVPRVYIKTAKDNLFDPVRQDVMVENWPP-AQTY 225 (255)
T ss_pred HHHHHHHhcCCCHHHHHHHHHhcCCCCCcchhhhhhcc--chhhcCCCCEEEEEcCCCCCCCHHHHHHHHHhCCc-ceEE
Confidence 0000000000000 0000000 000000000 00000 01225799999999999999999999999999997 6999
Q ss_pred EecCCCCCCCCCChHHHHHHHHHHHHhc
Q 022534 267 MIEGAGHMPQEDWPEKVVDGLRYFFLNY 294 (295)
Q Consensus 267 ~i~~~gH~~~~e~p~~~~~~i~~fl~~~ 294 (295)
++++|||++++|+|++|++.|.+|++.+
T Consensus 226 ~i~~~GH~~~~e~p~~v~~~l~~~~~~~ 253 (255)
T PLN02965 226 VLEDSDHSAFFSVPTTLFQYLLQAVSSL 253 (255)
T ss_pred EecCCCCchhhcCHHHHHHHHHHHHHHh
Confidence 9999999999999999999999998764
|
|
| >TIGR03343 biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase | Back alignment and domain information |
|---|
Probab=99.97 E-value=3e-30 Score=222.92 Aligned_cols=263 Identities=20% Similarity=0.332 Sum_probs=159.2
Q ss_pred ccceeeEEeC-----cEEEEEEEcCCCCCCCceEEEEcCCCCCCccchh---hHHHhhhCCCeEEEeCCCCCCCCCCCCC
Q 022534 10 REYGSYIKSG-----EYRWFVRETGSADSRLGTIVFLHGAPSHSYSYRN---VMSQMSDAGFHCFAPDWLGFGFSDKPEK 81 (295)
Q Consensus 10 ~~~~~~~~~~-----~~~~~~~~~g~~~~~~~~vv~lHG~~~~~~~w~~---~~~~l~~~~~~via~Dl~G~G~S~~~~~ 81 (295)
+-.|.|+.++ +++++|...|++ |+|||+||++++...|.. .+..|.+.+|+|+++|+||||+|+.+..
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~y~~~g~~----~~ivllHG~~~~~~~~~~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~ 79 (282)
T TIGR03343 4 SSTSKFVKINEKGLSNFRIHYNEAGNG----EAVIMLHGGGPGAGGWSNYYRNIGPFVDAGYRVILKDSPGFNKSDAVVM 79 (282)
T ss_pred CCcceEEEcccccccceeEEEEecCCC----CeEEEECCCCCchhhHHHHHHHHHHHHhCCCEEEEECCCCCCCCCCCcC
Confidence 4566777776 688999987743 589999999988888864 3556655689999999999999986532
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHhCCCCceEEEEecccch-HHHHHHHHhCcCccceeEEEcCCCCCCCCC-chhhhhhhc
Q 022534 82 GYDDFDFTENEFHEELDKLLDVLEVKYPFFLVVQGFLVG-SYGLTWALKNPSRISKLAILNSPLTASSPL-PGLFQQLRI 159 (295)
Q Consensus 82 ~~~~~~~~~~~~~~~l~~~~~~l~~~~~~~lv~~G~~~G-~~~~~~a~~~p~~v~~lil~~~p~~~~~~~-~~~~~~~~~ 159 (295)
.. ..+ ..+++++.++++.++.++ ++++ |||+| .+++.+|.++|++|+++++++++....... +......+
T Consensus 80 ~~---~~~-~~~~~~l~~~l~~l~~~~-~~lv--G~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~- 151 (282)
T TIGR03343 80 DE---QRG-LVNARAVKGLMDALDIEK-AHLV--GNSMGGATALNFALEYPDRIGKLILMGPGGLGPSLFAPMPMEGIK- 151 (282)
T ss_pred cc---ccc-chhHHHHHHHHHHcCCCC-eeEE--EECchHHHHHHHHHhChHhhceEEEECCCCCCccccccCchHHHH-
Confidence 11 112 256899999999999886 5565 77765 578899999999999999986542211000 00000000
Q ss_pred ccchhhhhhhHHHHHHHHHhC--CCccccccccccccccccccCCchh--HHHHHHHhcchh--hhhHhhhcCcCCCCCC
Q 022534 160 PLLGEFTAQNAIMAERFIEAG--SPYVLKLDKADVYRLPYLASSGPGF--ALLEAARKVNFK--DISSRIGAGFSSGSWD 233 (295)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~--~~~~~~~~~~~~~~~~ 233 (295)
.....+..........+.... .+........... ... ....+.. .+.......... +.... ..+++
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~------l~~i~ 223 (282)
T TIGR03343 152 LLFKLYAEPSYETLKQMLNVFLFDQSLITEELLQGR-WEN-IQRQPEHLKNFLISSQKAPLSTWDVTAR------LGEIK 223 (282)
T ss_pred HHHHHhcCCCHHHHHHHHhhCccCcccCcHHHHHhH-HHH-hhcCHHHHHHHHHhccccccccchHHHH------HhhCC
Confidence 000000000000001111000 0000000000000 000 0000000 000000000000 00011 13679
Q ss_pred CcEEEEEeCCCCCCCcchHHHHHhcCCCCeEEEEecCCCCCCCCCChHHHHHHHHHHHHh
Q 022534 234 KPVLVAWGISDKYLPQSVAEEFQKGNPNVVKLQMIEGAGHMPQEDWPEKVVDGLRYFFLN 293 (295)
Q Consensus 234 ~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 293 (295)
+|+|+|+|++|+++++..++++++.+++ +++++++++||++++|+|++|++.|.+|+.+
T Consensus 224 ~Pvlli~G~~D~~v~~~~~~~~~~~~~~-~~~~~i~~agH~~~~e~p~~~~~~i~~fl~~ 282 (282)
T TIGR03343 224 AKTLVTWGRDDRFVPLDHGLKLLWNMPD-AQLHVFSRCGHWAQWEHADAFNRLVIDFLRN 282 (282)
T ss_pred CCEEEEEccCCCcCCchhHHHHHHhCCC-CEEEEeCCCCcCCcccCHHHHHHHHHHHhhC
Confidence 9999999999999999999999999997 7999999999999999999999999999863
|
Members of this family are 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase, or HOPD hydrolase, the BphD protein of biphenyl degradation. BphD acts on the product of ring meta-cleavage by BphC. Many species carrying bphC and bphD are capable of degrading polychlorinated biphenyls as well as biphenyl itself. |
| >TIGR03056 bchO_mg_che_rel putative magnesium chelatase accessory protein | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.8e-30 Score=221.35 Aligned_cols=263 Identities=22% Similarity=0.358 Sum_probs=169.3
Q ss_pred cccceeeEEeCcEEEEEEEcCCCCCCCceEEEEcCCCCCCccchhhHHHhhhCCCeEEEeCCCCCCCCCCCCCCCCCCCC
Q 022534 9 GREYGSYIKSGEYRWFVRETGSADSRLGTIVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDF 88 (295)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~vv~lHG~~~~~~~w~~~~~~l~~~~~~via~Dl~G~G~S~~~~~~~~~~~~ 88 (295)
-|+-+++++.++++++|++.|+.+ .|+|||+||+++++..|..+++.|++ +|+|+++|+||||.|+.+.. ..|
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~g~~~--~~~vv~~hG~~~~~~~~~~~~~~l~~-~~~vi~~D~~G~G~S~~~~~----~~~ 76 (278)
T TIGR03056 4 HRDCSRRVTVGPFHWHVQDMGPTA--GPLLLLLHGTGASTHSWRDLMPPLAR-SFRVVAPDLPGHGFTRAPFR----FRF 76 (278)
T ss_pred CCCccceeeECCEEEEEEecCCCC--CCeEEEEcCCCCCHHHHHHHHHHHhh-CcEEEeecCCCCCCCCCccc----cCC
Confidence 367789999999999999988643 36999999999999999999999986 79999999999999987543 246
Q ss_pred CHHHHHHHHHHHHHHhCCCCceEEEEecccch-HHHHHHHHhCcCccceeEEEcCCCCCCCCCch-hhh---hh--hccc
Q 022534 89 TENEFHEELDKLLDVLEVKYPFFLVVQGFLVG-SYGLTWALKNPSRISKLAILNSPLTASSPLPG-LFQ---QL--RIPL 161 (295)
Q Consensus 89 ~~~~~~~~l~~~~~~l~~~~~~~lv~~G~~~G-~~~~~~a~~~p~~v~~lil~~~p~~~~~~~~~-~~~---~~--~~~~ 161 (295)
+++++++++.++++++++++ ++++ |||+| .+++.+|.++|++++++++++++......... ... .. ..+.
T Consensus 77 ~~~~~~~~l~~~i~~~~~~~-~~lv--G~S~Gg~~a~~~a~~~p~~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (278)
T TIGR03056 77 TLPSMAEDLSALCAAEGLSP-DGVI--GHSAGAAIALRLALDGPVTPRMVVGINAALMPFEGMAGTLFPYMARVLACNPF 153 (278)
T ss_pred CHHHHHHHHHHHHHHcCCCC-ceEE--EECccHHHHHHHHHhCCcccceEEEEcCcccccccccccccchhhHhhhhccc
Confidence 88999999999999998764 5666 67765 56788899999999999988654332111000 000 00 0000
Q ss_pred chhhhhh---hHHHHHHHHHhCCCccccccccccccccccccCCch--hHHHHHHHhcchhhhhHhhhcCcCCCCCCCcE
Q 022534 162 LGEFTAQ---NAIMAERFIEAGSPYVLKLDKADVYRLPYLASSGPG--FALLEAARKVNFKDISSRIGAGFSSGSWDKPV 236 (295)
Q Consensus 162 ~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~ 236 (295)
....... .......+... ....+.......+.. ...... ............... .. ..+++++|+
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~----~~--~~~~i~~P~ 223 (278)
T TIGR03056 154 TPPMMSRGAADQQRVERLIRD-TGSLLDKAGMTYYGR---LIRSPAHVDGALSMMAQWDLAPL----NR--DLPRITIPL 223 (278)
T ss_pred chHHHHhhcccCcchhHHhhc-cccccccchhhHHHH---hhcCchhhhHHHHHhhcccccch----hh--hcccCCCCE
Confidence 0000000 00000000000 000000000000000 000000 000000000000000 00 123678999
Q ss_pred EEEEeCCCCCCCcchHHHHHhcCCCCeEEEEecCCCCCCCCCChHHHHHHHHHHHH
Q 022534 237 LVAWGISDKYLPQSVAEEFQKGNPNVVKLQMIEGAGHMPQEDWPEKVVDGLRYFFL 292 (295)
Q Consensus 237 l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~ 292 (295)
++|+|++|.+++.+..+++.+.+++ +++++++++||++++|+|+++++.|.+|++
T Consensus 224 lii~g~~D~~vp~~~~~~~~~~~~~-~~~~~~~~~gH~~~~e~p~~~~~~i~~f~~ 278 (278)
T TIGR03056 224 HLIAGEEDKAVPPDESKRAATRVPT-ATLHVVPGGGHLVHEEQADGVVGLILQAAE 278 (278)
T ss_pred EEEEeCCCcccCHHHHHHHHHhccC-CeEEEECCCCCcccccCHHHHHHHHHHHhC
Confidence 9999999999999888999888887 799999999999999999999999999984
|
Members of this family belong to the alpha/beta fold family hydrolases (PFAM model pfam00561). Members are found in bacterial genomes if and only if they encoded for anoxygenic photosynthetic systems similar to that of Rhodobacter capsulatus and other alpha-Proteobacteria. Members often are encoded in the same operon as subunits of the protoporphyrin IX magnesium chelatase, and were once designated BchO. No literature supports a role as an actual subunit of magnesium chelatase, but an accessory role is possible, as suggested by placement by its probable hydrolase activity. |
| >PLN03087 BODYGUARD 1 domain containing hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=5.7e-30 Score=233.07 Aligned_cols=265 Identities=20% Similarity=0.298 Sum_probs=165.5
Q ss_pred eeEEeCcEEEEEEEcCCCC-CCCceEEEEcCCCCCCccchh-hHHHhhh---CCCeEEEeCCCCCCCCCCCCCCCCCCCC
Q 022534 14 SYIKSGEYRWFVRETGSAD-SRLGTIVFLHGAPSHSYSYRN-VMSQMSD---AGFHCFAPDWLGFGFSDKPEKGYDDFDF 88 (295)
Q Consensus 14 ~~~~~~~~~~~~~~~g~~~-~~~~~vv~lHG~~~~~~~w~~-~~~~l~~---~~~~via~Dl~G~G~S~~~~~~~~~~~~ 88 (295)
.+++.++..+||...|+++ +.+|+|||+||++++...|.. +++.|++ .+|+|+++|+||||+|+++.. ..|
T Consensus 179 ~~~~~~~~~l~~~~~gp~~~~~k~~VVLlHG~~~s~~~W~~~~~~~L~~~~~~~yrVia~Dl~G~G~S~~p~~----~~y 254 (481)
T PLN03087 179 SWLSSSNESLFVHVQQPKDNKAKEDVLFIHGFISSSAFWTETLFPNFSDAAKSTYRLFAVDLLGFGRSPKPAD----SLY 254 (481)
T ss_pred eeEeeCCeEEEEEEecCCCCCCCCeEEEECCCCccHHHHHHHHHHHHHHHhhCCCEEEEECCCCCCCCcCCCC----CcC
Confidence 5677888999999988755 335799999999999999985 4566652 589999999999999987632 246
Q ss_pred CHHHHHHHHH-HHHHHhCCCCceEEEEecccch-HHHHHHHHhCcCccceeEEEcCCCCCCCCCchhhhh-hh----ccc
Q 022534 89 TENEFHEELD-KLLDVLEVKYPFFLVVQGFLVG-SYGLTWALKNPSRISKLAILNSPLTASSPLPGLFQQ-LR----IPL 161 (295)
Q Consensus 89 ~~~~~~~~l~-~~~~~l~~~~~~~lv~~G~~~G-~~~~~~a~~~p~~v~~lil~~~p~~~~~~~~~~~~~-~~----~~~ 161 (295)
+.+++++++. .++++++.++ ++++ |||+| .+++.+|.++|++|++++++++|............. .+ ...
T Consensus 255 tl~~~a~~l~~~ll~~lg~~k-~~LV--GhSmGG~iAl~~A~~~Pe~V~~LVLi~~~~~~~~~~~~~~~~~~~~~~~~~~ 331 (481)
T PLN03087 255 TLREHLEMIERSVLERYKVKS-FHIV--AHSLGCILALALAVKHPGAVKSLTLLAPPYYPVPKGVQATQYVMRKVAPRRV 331 (481)
T ss_pred CHHHHHHHHHHHHHHHcCCCC-EEEE--EECHHHHHHHHHHHhChHhccEEEEECCCccccccchhHHHHHHHHhccccc
Confidence 8899999994 8999998875 6676 77776 468889999999999999997665432111100000 00 000
Q ss_pred chhhhhhhHHHHHHHHHhCCCcc---c--cccccc----ccccc----cc-----c-cCCchh-HHHHHHHhcc--hhhh
Q 022534 162 LGEFTAQNAIMAERFIEAGSPYV---L--KLDKAD----VYRLP----YL-----A-SSGPGF-ALLEAARKVN--FKDI 219 (295)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~---~--~~~~~~----~~~~~----~~-----~-~~~~~~-~~~~~~~~~~--~~~~ 219 (295)
...... ......|.+...... . ...... ..... .. . ...... .+........ ..+.
T Consensus 332 ~~~~~~--~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~l~~~i~~~~~~l~~~ 409 (481)
T PLN03087 332 WPPIAF--GASVACWYEHISRTICLVICKNHRLWEFLTRLLTRNRMRTFLIEGFFCHTHNAAWHTLHNIICGSGSKLDGY 409 (481)
T ss_pred CCcccc--chhHHHHHHHHHhhhhcccccchHHHHHHHHHhhhhhhhHHHHHHHHhccchhhHHHHHHHHhchhhhhhhH
Confidence 000000 000011111000000 0 000000 00000 00 0 000000 0000000000 0011
Q ss_pred hHhhhcCcCCCCCCCcEEEEEeCCCCCCCcchHHHHHhcCCCCeEEEEecCCCCCCCC-CChHHHHHHHHHHHHh
Q 022534 220 SSRIGAGFSSGSWDKPVLVAWGISDKYLPQSVAEEFQKGNPNVVKLQMIEGAGHMPQE-DWPEKVVDGLRYFFLN 293 (295)
Q Consensus 220 ~~~~~~~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~-e~p~~~~~~i~~fl~~ 293 (295)
+..+. .++++|+|+|+|++|+++|++.++.+++.+|+ +++++|++|||++++ |+|++|++.|.+|...
T Consensus 410 l~~l~-----~~I~vPtLII~Ge~D~ivP~~~~~~la~~iP~-a~l~vI~~aGH~~~v~e~p~~fa~~L~~F~~~ 478 (481)
T PLN03087 410 LDHVR-----DQLKCDVAIFHGGDDELIPVECSYAVKAKVPR-ARVKVIDDKDHITIVVGRQKEFARELEEIWRR 478 (481)
T ss_pred HHHHH-----HhCCCCEEEEEECCCCCCCHHHHHHHHHhCCC-CEEEEeCCCCCcchhhcCHHHHHHHHHHHhhc
Confidence 11111 25789999999999999999999999999997 799999999999985 9999999999999864
|
|
| >PRK10349 carboxylesterase BioH; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.3e-30 Score=219.89 Aligned_cols=242 Identities=20% Similarity=0.264 Sum_probs=147.1
Q ss_pred EEEEEcCCCCCCCceEEEEcCCCCCCccchhhHHHhhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
Q 022534 23 WFVRETGSADSRLGTIVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEELDKLLD 102 (295)
Q Consensus 23 ~~~~~~g~~~~~~~~vv~lHG~~~~~~~w~~~~~~l~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~l~~~~~ 102 (295)
++|.+.|.++ |+||||||+++++..|..+++.|.+ +|+|+++|+||||.|+.+. .++++++++++.+
T Consensus 4 ~~y~~~G~g~---~~ivllHG~~~~~~~w~~~~~~L~~-~~~vi~~Dl~G~G~S~~~~------~~~~~~~~~~l~~--- 70 (256)
T PRK10349 4 IWWQTKGQGN---VHLVLLHGWGLNAEVWRCIDEELSS-HFTLHLVDLPGFGRSRGFG------ALSLADMAEAVLQ--- 70 (256)
T ss_pred cchhhcCCCC---CeEEEECCCCCChhHHHHHHHHHhc-CCEEEEecCCCCCCCCCCC------CCCHHHHHHHHHh---
Confidence 5677777532 4799999999999999999999986 6999999999999998532 2466777766554
Q ss_pred HhCCCCceEEEEecccch-HHHHHHHHhCcCccceeEEEcCCCCCC--CCCchhhhhhhcccchhhhhhhHHHHHHHHHh
Q 022534 103 VLEVKYPFFLVVQGFLVG-SYGLTWALKNPSRISKLAILNSPLTAS--SPLPGLFQQLRIPLLGEFTAQNAIMAERFIEA 179 (295)
Q Consensus 103 ~l~~~~~~~lv~~G~~~G-~~~~~~a~~~p~~v~~lil~~~p~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (295)
++.++ +++| |||+| .+++.+|.++|++|+++|+++++.... ...+.........+...+...-......++..
T Consensus 71 -~~~~~-~~lv--GhS~Gg~ia~~~a~~~p~~v~~lili~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (256)
T PRK10349 71 -QAPDK-AIWL--GWSLGGLVASQIALTHPERVQALVTVASSPCFSARDEWPGIKPDVLAGFQQQLSDDFQRTVERFLAL 146 (256)
T ss_pred -cCCCC-eEEE--EECHHHHHHHHHHHhChHhhheEEEecCccceecCCCCCcccHHHHHHHHHHHHhchHHHHHHHHHH
Confidence 35554 6777 67766 568888999999999999997642211 11111110000000000000000001111110
Q ss_pred --CCCccccccccccccccccccCCchhHHH----HHHHhcchhhhhHhhhcCcCCCCCCCcEEEEEeCCCCCCCcchHH
Q 022534 180 --GSPYVLKLDKADVYRLPYLASSGPGFALL----EAARKVNFKDISSRIGAGFSSGSWDKPVLVAWGISDKYLPQSVAE 253 (295)
Q Consensus 180 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~~~~~~~ 253 (295)
............ +.........+..... ......+ ....+ +++++|+|+|+|++|.+++.+.++
T Consensus 147 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~l------~~i~~P~lii~G~~D~~~~~~~~~ 216 (256)
T PRK10349 147 QTMGTETARQDARA-LKKTVLALPMPEVDVLNGGLEILKTVD---LRQPL------QNVSMPFLRLYGYLDGLVPRKVVP 216 (256)
T ss_pred HHccCchHHHHHHH-HHHHhhccCCCcHHHHHHHHHHHHhCc---cHHHH------hhcCCCeEEEecCCCccCCHHHHH
Confidence 000000000000 0000000000101000 0111111 11111 267999999999999999998889
Q ss_pred HHHhcCCCCeEEEEecCCCCCCCCCChHHHHHHHHHHHH
Q 022534 254 EFQKGNPNVVKLQMIEGAGHMPQEDWPEKVVDGLRYFFL 292 (295)
Q Consensus 254 ~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~ 292 (295)
.+.+.+++ ++++++|+|||++++|+|++|++.|.+|-.
T Consensus 217 ~~~~~i~~-~~~~~i~~~gH~~~~e~p~~f~~~l~~~~~ 254 (256)
T PRK10349 217 MLDKLWPH-SESYIFAKAAHAPFISHPAEFCHLLVALKQ 254 (256)
T ss_pred HHHHhCCC-CeEEEeCCCCCCccccCHHHHHHHHHHHhc
Confidence 99999987 799999999999999999999999999843
|
|
| >PLN02385 hydrolase; alpha/beta fold family protein | Back alignment and domain information |
|---|
Probab=99.97 E-value=5.1e-30 Score=228.38 Aligned_cols=263 Identities=19% Similarity=0.290 Sum_probs=164.0
Q ss_pred cceeeEEeCcEEEEEEEcCCCC-CCCceEEEEcCCCCCCcc-chhhHHHhhhCCCeEEEeCCCCCCCCCCCCCCCCCCCC
Q 022534 11 EYGSYIKSGEYRWFVRETGSAD-SRLGTIVFLHGAPSHSYS-YRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDF 88 (295)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~g~~~-~~~~~vv~lHG~~~~~~~-w~~~~~~l~~~~~~via~Dl~G~G~S~~~~~~~~~~~~ 88 (295)
+..++++.+|.+++++.+++.+ +++++|||+||+++++.. |..+++.|++.||+|+++|+||||+|+.+.. +.+
T Consensus 62 ~~~~~~~~~g~~l~~~~~~p~~~~~~~~iv~lHG~~~~~~~~~~~~~~~l~~~g~~v~~~D~~G~G~S~~~~~----~~~ 137 (349)
T PLN02385 62 EESYEVNSRGVEIFSKSWLPENSRPKAAVCFCHGYGDTCTFFFEGIARKIASSGYGVFAMDYPGFGLSEGLHG----YIP 137 (349)
T ss_pred eeeeEEcCCCCEEEEEEEecCCCCCCeEEEEECCCCCccchHHHHHHHHHHhCCCEEEEecCCCCCCCCCCCC----CcC
Confidence 4456777899999999998643 356899999999988765 6889999987799999999999999997532 234
Q ss_pred CHHHHHHHHHHHHHHhCCC-----CceEEEEecccch-HHHHHHHHhCcCccceeEEEcCCCCCCCC-Cc-hhhhhhhcc
Q 022534 89 TENEFHEELDKLLDVLEVK-----YPFFLVVQGFLVG-SYGLTWALKNPSRISKLAILNSPLTASSP-LP-GLFQQLRIP 160 (295)
Q Consensus 89 ~~~~~~~~l~~~~~~l~~~-----~~~~lv~~G~~~G-~~~~~~a~~~p~~v~~lil~~~p~~~~~~-~~-~~~~~~~~~ 160 (295)
+.+++++|+.++++.+..+ .+++|+ |||+| .+++.+|.++|++|+++|++++....... .+ ........
T Consensus 138 ~~~~~~~dv~~~l~~l~~~~~~~~~~~~Lv--GhSmGG~val~~a~~~p~~v~glVLi~p~~~~~~~~~~~~~~~~~~~- 214 (349)
T PLN02385 138 SFDDLVDDVIEHYSKIKGNPEFRGLPSFLF--GQSMGGAVALKVHLKQPNAWDGAILVAPMCKIADDVVPPPLVLQILI- 214 (349)
T ss_pred CHHHHHHHHHHHHHHHHhccccCCCCEEEE--EeccchHHHHHHHHhCcchhhheeEecccccccccccCchHHHHHHH-
Confidence 6788999999999887542 256777 67765 57888899999999999999643221110 01 11000000
Q ss_pred cchhhhhhhHHHHHHHHHhC--CCccccc-cccccccc-cccccCCchh-HHHHHHHhcchhhhhHhhhcCcCCCCCCCc
Q 022534 161 LLGEFTAQNAIMAERFIEAG--SPYVLKL-DKADVYRL-PYLASSGPGF-ALLEAARKVNFKDISSRIGAGFSSGSWDKP 235 (295)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~-~~~~~~~~-~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P 235 (295)
.+..... .. ...... ....... ........ .......... .....+... .+ +... ..++++|
T Consensus 215 ~~~~~~p-~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~~----~~~~--l~~i~~P 281 (349)
T PLN02385 215 LLANLLP-KA----KLVPQKDLAELAFRDLKKRKMAEYNVIAYKDKPRLRTAVELLRTT--QE----IEMQ--LEEVSLP 281 (349)
T ss_pred HHHHHCC-Cc----eecCCCccccccccCHHHHHHhhcCcceeCCCcchHHHHHHHHHH--HH----HHHh--cccCCCC
Confidence 0000000 00 000000 0000000 00000000 0000000011 111111100 01 1111 2367999
Q ss_pred EEEEEeCCCCCCCcchHHHHHhcCCC-CeEEEEecCCCCCCCCCChHH----HHHHHHHHHHh
Q 022534 236 VLVAWGISDKYLPQSVAEEFQKGNPN-VVKLQMIEGAGHMPQEDWPEK----VVDGLRYFFLN 293 (295)
Q Consensus 236 ~l~i~G~~D~~~~~~~~~~~~~~~~~-~~~~~~i~~~gH~~~~e~p~~----~~~~i~~fl~~ 293 (295)
+|+|+|++|.+++++.++.+++.++. +++++++|++||++++|+|++ +++.|.+||.+
T Consensus 282 ~Lii~G~~D~vv~~~~~~~l~~~~~~~~~~l~~i~~~gH~l~~e~p~~~~~~v~~~i~~wL~~ 344 (349)
T PLN02385 282 LLILHGEADKVTDPSVSKFLYEKASSSDKKLKLYEDAYHSILEGEPDEMIFQVLDDIISWLDS 344 (349)
T ss_pred EEEEEeCCCCccChHHHHHHHHHcCCCCceEEEeCCCeeecccCCChhhHHHHHHHHHHHHHH
Confidence 99999999999999999999887632 479999999999999999987 88899999976
|
|
| >PRK06489 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.1e-29 Score=227.21 Aligned_cols=266 Identities=19% Similarity=0.227 Sum_probs=155.6
Q ss_pred eCcEEEEEEEcCCCCC-----CCceEEEEcCCCCCCccch--hhHHHh-------hhCCCeEEEeCCCCCCCCCCCCCCC
Q 022534 18 SGEYRWFVRETGSADS-----RLGTIVFLHGAPSHSYSYR--NVMSQM-------SDAGFHCFAPDWLGFGFSDKPEKGY 83 (295)
Q Consensus 18 ~~~~~~~~~~~g~~~~-----~~~~vv~lHG~~~~~~~w~--~~~~~l-------~~~~~~via~Dl~G~G~S~~~~~~~ 83 (295)
.+|.+++|++.|+++. ..|+|||+||+++++..|. .+.+.| ...+|+||++|+||||+|+.+....
T Consensus 47 ~~g~~i~y~~~G~~~~~~~~~~gpplvllHG~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~Via~Dl~GhG~S~~p~~~~ 126 (360)
T PRK06489 47 LPELRLHYTTLGTPHRNADGEIDNAVLVLHGTGGSGKSFLSPTFAGELFGPGQPLDASKYFIILPDGIGHGKSSKPSDGL 126 (360)
T ss_pred cCCceEEEEecCCCCcccccCCCCeEEEeCCCCCchhhhccchhHHHhcCCCCcccccCCEEEEeCCCCCCCCCCCCcCC
Confidence 4689999999986420 0368999999999988886 444444 1247999999999999999754221
Q ss_pred --CCCCCCHHHHHHHHHHH-HHHhCCCCceEEEEecccch-HHHHHHHHhCcCccceeEEEcCCCCCCCCCchhhhh---
Q 022534 84 --DDFDFTENEFHEELDKL-LDVLEVKYPFFLVVQGFLVG-SYGLTWALKNPSRISKLAILNSPLTASSPLPGLFQQ--- 156 (295)
Q Consensus 84 --~~~~~~~~~~~~~l~~~-~~~l~~~~~~~lv~~G~~~G-~~~~~~a~~~p~~v~~lil~~~p~~~~~~~~~~~~~--- 156 (295)
....|+++++++++.++ ++++++++.++++ |||+| .+++.+|.++|++|+++|++++..............
T Consensus 127 ~~~~~~~~~~~~a~~~~~~l~~~lgi~~~~~lv--G~SmGG~vAl~~A~~~P~~V~~LVLi~s~~~~~~~~~~~~~~~~~ 204 (360)
T PRK06489 127 RAAFPRYDYDDMVEAQYRLVTEGLGVKHLRLIL--GTSMGGMHAWMWGEKYPDFMDALMPMASQPTEMSGRNWMWRRMLI 204 (360)
T ss_pred CCCCCcccHHHHHHHHHHHHHHhcCCCceeEEE--EECHHHHHHHHHHHhCchhhheeeeeccCcccccHHHHHHHHHHH
Confidence 01146889999988885 4889988644455 77776 578899999999999999987532211110000000
Q ss_pred --hhc-c-cc-hhhhhhhHHHH--H---HHHHhC------CCccccccccccccccccc--cCCchhHHHHHHHhcchhh
Q 022534 157 --LRI-P-LL-GEFTAQNAIMA--E---RFIEAG------SPYVLKLDKADVYRLPYLA--SSGPGFALLEAARKVNFKD 218 (295)
Q Consensus 157 --~~~-~-~~-~~~~~~~~~~~--~---~~~~~~------~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~ 218 (295)
... + +. ..+........ . .+.... .............+..... ...+. .+..........+
T Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~d 283 (360)
T PRK06489 205 ESIRNDPAWNNGNYTTQPPSLKRANPMFAIATSGGTLAYQAQAPTRAAADKLVDERLAAPVTADAN-DFLYQWDSSRDYN 283 (360)
T ss_pred HHHHhCCCCCCCCCCCCHHHHHHHHHHHHHHHhCCHHHHHHhcCChHHHHHHHHHHHHhhhhcCHH-HHHHHHHHhhccC
Confidence 000 0 00 00000000000 0 000000 0000000000000000000 00000 0000000000001
Q ss_pred hhHhhhcCcCCCCCCCcEEEEEeCCCCCCCcchH--HHHHhcCCCCeEEEEecCC----CCCCCCCChHHHHHHHHHHHH
Q 022534 219 ISSRIGAGFSSGSWDKPVLVAWGISDKYLPQSVA--EEFQKGNPNVVKLQMIEGA----GHMPQEDWPEKVVDGLRYFFL 292 (295)
Q Consensus 219 ~~~~~~~~~~~~~~~~P~l~i~G~~D~~~~~~~~--~~~~~~~~~~~~~~~i~~~----gH~~~~e~p~~~~~~i~~fl~ 292 (295)
.... ..++++|+|+|+|++|.+++++.+ +++++.+|+ .++++||+| ||+++ |+|++|++.|.+||.
T Consensus 284 ~~~~------L~~I~~PvLvI~G~~D~~~p~~~~~~~~la~~ip~-a~l~~i~~a~~~~GH~~~-e~P~~~~~~i~~FL~ 355 (360)
T PRK06489 284 PSPD------LEKIKAPVLAINSADDERNPPETGVMEAALKRVKH-GRLVLIPASPETRGHGTT-GSAKFWKAYLAEFLA 355 (360)
T ss_pred hHHH------HHhCCCCEEEEecCCCcccChhhHHHHHHHHhCcC-CeEEEECCCCCCCCcccc-cCHHHHHHHHHHHHH
Confidence 1111 136799999999999999988865 788999997 699999996 99998 899999999999997
Q ss_pred hc
Q 022534 293 NY 294 (295)
Q Consensus 293 ~~ 294 (295)
..
T Consensus 356 ~~ 357 (360)
T PRK06489 356 QV 357 (360)
T ss_pred hc
Confidence 63
|
|
| >PLN02578 hydrolase | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.4e-29 Score=224.39 Aligned_cols=261 Identities=20% Similarity=0.306 Sum_probs=162.6
Q ss_pred eeeEEeCcEEEEEEEcCCCCCCCceEEEEcCCCCCCccchhhHHHhhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCCHHH
Q 022534 13 GSYIKSGEYRWFVRETGSADSRLGTIVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTENE 92 (295)
Q Consensus 13 ~~~~~~~~~~~~~~~~g~~~~~~~~vv~lHG~~~~~~~w~~~~~~l~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~ 92 (295)
..+++.+|..++|.+.|++ ++|||+||+++++..|..+++.|++ +|+|+++|+||||.|+++.. .|+.+.
T Consensus 68 ~~~~~~~~~~i~Y~~~g~g----~~vvliHG~~~~~~~w~~~~~~l~~-~~~v~~~D~~G~G~S~~~~~-----~~~~~~ 137 (354)
T PLN02578 68 YNFWTWRGHKIHYVVQGEG----LPIVLIHGFGASAFHWRYNIPELAK-KYKVYALDLLGFGWSDKALI-----EYDAMV 137 (354)
T ss_pred ceEEEECCEEEEEEEcCCC----CeEEEECCCCCCHHHHHHHHHHHhc-CCEEEEECCCCCCCCCCccc-----ccCHHH
Confidence 3566778999999988743 5899999999999999999999985 79999999999999997642 457888
Q ss_pred HHHHHHHHHHHhCCCCceEEEEecccch-HHHHHHHHhCcCccceeEEEcCCCCCCCCC---chhh---hhh-hcccchh
Q 022534 93 FHEELDKLLDVLEVKYPFFLVVQGFLVG-SYGLTWALKNPSRISKLAILNSPLTASSPL---PGLF---QQL-RIPLLGE 164 (295)
Q Consensus 93 ~~~~l~~~~~~l~~~~~~~lv~~G~~~G-~~~~~~a~~~p~~v~~lil~~~p~~~~~~~---~~~~---~~~-~~~~~~~ 164 (295)
+++++.++++.+..+ +++++ |||+| .+++.+|.++|++|+++++++++....... .... ... ...+...
T Consensus 138 ~a~~l~~~i~~~~~~-~~~lv--G~S~Gg~ia~~~A~~~p~~v~~lvLv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (354)
T PLN02578 138 WRDQVADFVKEVVKE-PAVLV--GNSLGGFTALSTAVGYPELVAGVALLNSAGQFGSESREKEEAIVVEETVLTRFVVKP 214 (354)
T ss_pred HHHHHHHHHHHhccC-CeEEE--EECHHHHHHHHHHHhChHhcceEEEECCCccccccccccccccccccchhhHHHhHH
Confidence 999999999998765 46676 66665 578889999999999999987543211100 0000 000 0000000
Q ss_pred hhhhhHHHHHHHH--HhCCCc--------cc-cccc-cc-cccccccccCCch--hHHHHHHHhcc---hhhhhHhhhcC
Q 022534 165 FTAQNAIMAERFI--EAGSPY--------VL-KLDK-AD-VYRLPYLASSGPG--FALLEAARKVN---FKDISSRIGAG 226 (295)
Q Consensus 165 ~~~~~~~~~~~~~--~~~~~~--------~~-~~~~-~~-~~~~~~~~~~~~~--~~~~~~~~~~~---~~~~~~~~~~~ 226 (295)
...........+. ....+. .. .... .+ ..........+++ ..++....... ........
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 291 (354)
T PLN02578 215 LKEWFQRVVLGFLFWQAKQPSRIESVLKSVYKDKSNVDDYLVESITEPAADPNAGEVYYRLMSRFLFNQSRYTLDSL--- 291 (354)
T ss_pred HHHHHHHHHHHHHHHHhcCHHHHHHHHHHhcCCcccCCHHHHHHHHhcccCCchHHHHHHHHHHHhcCCCCCCHHHH---
Confidence 0000000000000 000000 00 0000 00 0000000000111 11111111000 00000000
Q ss_pred cCCCCCCCcEEEEEeCCCCCCCcchHHHHHhcCCCCeEEEEecCCCCCCCCCChHHHHHHHHHHHHh
Q 022534 227 FSSGSWDKPVLVAWGISDKYLPQSVAEEFQKGNPNVVKLQMIEGAGHMPQEDWPEKVVDGLRYFFLN 293 (295)
Q Consensus 227 ~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 293 (295)
.+++++|+++|+|++|++++.+.++++++.+++ ++++++ ++||++++|+|++|++.|.+|+..
T Consensus 292 --l~~i~~PvLiI~G~~D~~v~~~~~~~l~~~~p~-a~l~~i-~~GH~~~~e~p~~~~~~I~~fl~~ 354 (354)
T PLN02578 292 --LSKLSCPLLLLWGDLDPWVGPAKAEKIKAFYPD-TTLVNL-QAGHCPHDEVPEQVNKALLEWLSS 354 (354)
T ss_pred --hhcCCCCEEEEEeCCCCCCCHHHHHHHHHhCCC-CEEEEe-CCCCCccccCHHHHHHHHHHHHhC
Confidence 136799999999999999999999999999987 699999 699999999999999999999863
|
|
| >PHA02857 monoglyceride lipase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=8e-29 Score=213.64 Aligned_cols=256 Identities=17% Similarity=0.248 Sum_probs=157.8
Q ss_pred eeeEEeCcEEEEEEEcCCCCCCCceEEEEcCCCCCCccchhhHHHhhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCCHHH
Q 022534 13 GSYIKSGEYRWFVRETGSADSRLGTIVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTENE 92 (295)
Q Consensus 13 ~~~~~~~~~~~~~~~~g~~~~~~~~vv~lHG~~~~~~~w~~~~~~l~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~ 92 (295)
+.|+..+|.+++|+.+-+++++++.|+++||+++++..|..+++.|++.||+|+++|+||||.|++..... .+..+
T Consensus 3 ~~~~~~~g~~l~~~~~~~~~~~~~~v~llHG~~~~~~~~~~~~~~l~~~g~~via~D~~G~G~S~~~~~~~----~~~~~ 78 (276)
T PHA02857 3 NCMFNLDNDYIYCKYWKPITYPKALVFISHGAGEHSGRYEELAENISSLGILVFSHDHIGHGRSNGEKMMI----DDFGV 78 (276)
T ss_pred ceeecCCCCEEEEEeccCCCCCCEEEEEeCCCccccchHHHHHHHHHhCCCEEEEccCCCCCCCCCccCCc----CCHHH
Confidence 46788899999999886644556778888999999999999999998779999999999999998632111 13344
Q ss_pred HHHHHHHHHHHhC---CCCceEEEEecccch-HHHHHHHHhCcCccceeEEEcCCCCCCCCCchhhhhhhcccchhhhhh
Q 022534 93 FHEELDKLLDVLE---VKYPFFLVVQGFLVG-SYGLTWALKNPSRISKLAILNSPLTASSPLPGLFQQLRIPLLGEFTAQ 168 (295)
Q Consensus 93 ~~~~l~~~~~~l~---~~~~~~lv~~G~~~G-~~~~~~a~~~p~~v~~lil~~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (295)
+.+|+.+.++.+. -.++++++ |||+| .+++.+|.++|++++++|+++++... ...+ ........
T Consensus 79 ~~~d~~~~l~~~~~~~~~~~~~lv--G~S~GG~ia~~~a~~~p~~i~~lil~~p~~~~-~~~~-~~~~~~~~-------- 146 (276)
T PHA02857 79 YVRDVVQHVVTIKSTYPGVPVFLL--GHSMGATISILAAYKNPNLFTAMILMSPLVNA-EAVP-RLNLLAAK-------- 146 (276)
T ss_pred HHHHHHHHHHHHHhhCCCCCEEEE--EcCchHHHHHHHHHhCccccceEEEecccccc-cccc-HHHHHHHH--------
Confidence 5555555555431 12357777 67766 46788888999999999998653321 1111 00000000
Q ss_pred hHHHHHHHHHhC-----CCcccccccccc--c-cccccccCCchhHHHHHHHhcchhhhhHhhhcCcCCCCCCCcEEEEE
Q 022534 169 NAIMAERFIEAG-----SPYVLKLDKADV--Y-RLPYLASSGPGFALLEAARKVNFKDISSRIGAGFSSGSWDKPVLVAW 240 (295)
Q Consensus 169 ~~~~~~~~~~~~-----~~~~~~~~~~~~--~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~ 240 (295)
....+.... .+.......... + ..++.........+...+.. ....+... .+++++|+|+|+
T Consensus 147 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~--l~~i~~Pvliv~ 216 (276)
T PHA02857 147 ---LMGIFYPNKIVGKLCPESVSRDMDEVYKYQYDPLVNHEKIKAGFASQVLK-----ATNKVRKI--IPKIKTPILILQ 216 (276)
T ss_pred ---HHHHhCCCCccCCCCHhhccCCHHHHHHHhcCCCccCCCccHHHHHHHHH-----HHHHHHHh--cccCCCCEEEEe
Confidence 000000000 000000000000 0 00000000011111111110 00111111 236799999999
Q ss_pred eCCCCCCCcchHHHHHhcCCCCeEEEEecCCCCCCCCCCh---HHHHHHHHHHHHhc
Q 022534 241 GISDKYLPQSVAEEFQKGNPNVVKLQMIEGAGHMPQEDWP---EKVVDGLRYFFLNY 294 (295)
Q Consensus 241 G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p---~~~~~~i~~fl~~~ 294 (295)
|++|.++|++.+.++.+.++.++++++++++||.++.|++ +++.+.|.+||...
T Consensus 217 G~~D~i~~~~~~~~l~~~~~~~~~~~~~~~~gH~~~~e~~~~~~~~~~~~~~~l~~~ 273 (276)
T PHA02857 217 GTNNEISDVSGAYYFMQHANCNREIKIYEGAKHHLHKETDEVKKSVMKEIETWIFNR 273 (276)
T ss_pred cCCCCcCChHHHHHHHHHccCCceEEEeCCCcccccCCchhHHHHHHHHHHHHHHHh
Confidence 9999999999999998876434799999999999999876 58999999999864
|
|
| >TIGR03611 RutD pyrimidine utilization protein D | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.3e-29 Score=212.37 Aligned_cols=247 Identities=22% Similarity=0.324 Sum_probs=156.9
Q ss_pred EEEEEcCCCCCCCceEEEEcCCCCCCccchhhHHHhhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
Q 022534 23 WFVRETGSADSRLGTIVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEELDKLLD 102 (295)
Q Consensus 23 ~~~~~~g~~~~~~~~vv~lHG~~~~~~~w~~~~~~l~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~l~~~~~ 102 (295)
++|...|++.+.+|+|||+||+++++..|..+++.|.+ +|+|+++|+||||.|+.+.. ..|+.+++++++.++++
T Consensus 1 ~~~~~~~~~~~~~~~iv~lhG~~~~~~~~~~~~~~l~~-~~~vi~~D~~G~G~S~~~~~----~~~~~~~~~~~~~~~i~ 75 (257)
T TIGR03611 1 MHYELHGPPDADAPVVVLSSGLGGSGSYWAPQLDVLTQ-RFHVVTYDHRGTGRSPGELP----PGYSIAHMADDVLQLLD 75 (257)
T ss_pred CEEEEecCCCCCCCEEEEEcCCCcchhHHHHHHHHHHh-ccEEEEEcCCCCCCCCCCCc----ccCCHHHHHHHHHHHHH
Confidence 36677776544568999999999999999999999975 79999999999999986432 24688999999999999
Q ss_pred HhCCCCceEEEEecccch-HHHHHHHHhCcCccceeEEEcCCCCCCCCCchh-hhhhhcccchhhhhhhHHH--------
Q 022534 103 VLEVKYPFFLVVQGFLVG-SYGLTWALKNPSRISKLAILNSPLTASSPLPGL-FQQLRIPLLGEFTAQNAIM-------- 172 (295)
Q Consensus 103 ~l~~~~~~~lv~~G~~~G-~~~~~~a~~~p~~v~~lil~~~p~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~-------- 172 (295)
.++.++ ++++ |||+| .++..+|.++|++|+++|++++.... ...... +.. ...++... ......
T Consensus 76 ~~~~~~-~~l~--G~S~Gg~~a~~~a~~~~~~v~~~i~~~~~~~~-~~~~~~~~~~-~~~~~~~~-~~~~~~~~~~~~~~ 149 (257)
T TIGR03611 76 ALNIER-FHFV--GHALGGLIGLQLALRYPERLLSLVLINAWSRP-DPHTRRCFDV-RIALLQHA-GPEAYVHAQALFLY 149 (257)
T ss_pred HhCCCc-EEEE--EechhHHHHHHHHHHChHHhHHheeecCCCCC-ChhHHHHHHH-HHHHHhcc-Ccchhhhhhhhhhc
Confidence 998775 6666 67765 56888889999999999988643221 110000 000 00000000 000000
Q ss_pred HHHHHHhCCCccccccccccccccccccCCchhHHHHHHHhcchhhhhHhhhcCcCCCCCCCcEEEEEeCCCCCCCcchH
Q 022534 173 AERFIEAGSPYVLKLDKADVYRLPYLASSGPGFALLEAARKVNFKDISSRIGAGFSSGSWDKPVLVAWGISDKYLPQSVA 252 (295)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~~~~~~ 252 (295)
...|+....+.. ........ ...... ..+..........+.... ..++++|+++++|++|.+++++.+
T Consensus 150 ~~~~~~~~~~~~---~~~~~~~~--~~~~~~-~~~~~~~~~~~~~~~~~~------~~~i~~P~l~i~g~~D~~~~~~~~ 217 (257)
T TIGR03611 150 PADWISENAARL---AADEAHAL--AHFPGK-ANVLRRINALEAFDVSAR------LDRIQHPVLLIANRDDMLVPYTQS 217 (257)
T ss_pred cccHhhccchhh---hhhhhhcc--cccCcc-HHHHHHHHHHHcCCcHHH------hcccCccEEEEecCcCcccCHHHH
Confidence 000000000000 00000000 000000 001111000000011111 136789999999999999999999
Q ss_pred HHHHhcCCCCeEEEEecCCCCCCCCCChHHHHHHHHHHHHh
Q 022534 253 EEFQKGNPNVVKLQMIEGAGHMPQEDWPEKVVDGLRYFFLN 293 (295)
Q Consensus 253 ~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 293 (295)
+++++.+++ +++++++++||++++|+|+++++.|.+||++
T Consensus 218 ~~~~~~~~~-~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 257 (257)
T TIGR03611 218 LRLAAALPN-AQLKLLPYGGHASNVTDPETFNRALLDFLKT 257 (257)
T ss_pred HHHHHhcCC-ceEEEECCCCCCccccCHHHHHHHHHHHhcC
Confidence 999998887 6999999999999999999999999999974
|
This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the hydrolase, alpha/beta fold family defined by pfam00067. |
| >PRK10673 acyl-CoA esterase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=9.4e-29 Score=210.45 Aligned_cols=247 Identities=15% Similarity=0.233 Sum_probs=155.1
Q ss_pred EEEEEEcC-CCCCCCceEEEEcCCCCCCccchhhHHHhhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH
Q 022534 22 RWFVRETG-SADSRLGTIVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEELDKL 100 (295)
Q Consensus 22 ~~~~~~~g-~~~~~~~~vv~lHG~~~~~~~w~~~~~~l~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~l~~~ 100 (295)
+++|+..+ .++..+|+|||+||++++...|..+++.|++ +|+|+++|+||||.|+.+. .++.+++++|+.++
T Consensus 2 ~~~~~~~~~~~~~~~~~iv~lhG~~~~~~~~~~~~~~l~~-~~~vi~~D~~G~G~s~~~~------~~~~~~~~~d~~~~ 74 (255)
T PRK10673 2 KLNIRAQTAQNPHNNSPIVLVHGLFGSLDNLGVLARDLVN-DHDIIQVDMRNHGLSPRDP------VMNYPAMAQDLLDT 74 (255)
T ss_pred cceeeeccCCCCCCCCCEEEECCCCCchhHHHHHHHHHhh-CCeEEEECCCCCCCCCCCC------CCCHHHHHHHHHHH
Confidence 34555543 2333468999999999999999999999986 7999999999999998642 25778999999999
Q ss_pred HHHhCCCCceEEEEecccch-HHHHHHHHhCcCccceeEEEcCCC-CCCCCC-chhhhhhhcccchhhhhhhHHHHHHHH
Q 022534 101 LDVLEVKYPFFLVVQGFLVG-SYGLTWALKNPSRISKLAILNSPL-TASSPL-PGLFQQLRIPLLGEFTAQNAIMAERFI 177 (295)
Q Consensus 101 ~~~l~~~~~~~lv~~G~~~G-~~~~~~a~~~p~~v~~lil~~~p~-~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (295)
+++++.++ ++++ |||+| .+++.+|.++|++|+++++++++. ...... ...+.............. .... ...
T Consensus 75 l~~l~~~~-~~lv--GhS~Gg~va~~~a~~~~~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~ 149 (255)
T PRK10673 75 LDALQIEK-ATFI--GHSMGGKAVMALTALAPDRIDKLVAIDIAPVDYHVRRHDEIFAAINAVSEAGATTR-QQAA-AIM 149 (255)
T ss_pred HHHcCCCc-eEEE--EECHHHHHHHHHHHhCHhhcceEEEEecCCCCccchhhHHHHHHHHHhhhcccccH-HHHH-HHH
Confidence 99998875 6666 67776 467888899999999999986432 211100 000100000000000000 0000 000
Q ss_pred HhCCCccccccccccccccccccC-Cchh-HHHHHHHhcchhhhhHhhhcCcCCCCCCCcEEEEEeCCCCCCCcchHHHH
Q 022534 178 EAGSPYVLKLDKADVYRLPYLASS-GPGF-ALLEAARKVNFKDISSRIGAGFSSGSWDKPVLVAWGISDKYLPQSVAEEF 255 (295)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~ 255 (295)
..... ...........+.... .... ...... ..+...-..+.+++|+|+|+|++|+.++.+..+.+
T Consensus 150 ~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~ 217 (255)
T PRK10673 150 RQHLN---EEGVIQFLLKSFVDGEWRFNVPVLWDQY---------PHIVGWEKIPAWPHPALFIRGGNSPYVTEAYRDDL 217 (255)
T ss_pred HHhcC---CHHHHHHHHhcCCcceeEeeHHHHHHhH---------HHHhCCcccCCCCCCeEEEECCCCCCCCHHHHHHH
Confidence 00000 0000000000000000 0000 000000 01100001236789999999999999999999999
Q ss_pred HhcCCCCeEEEEecCCCCCCCCCChHHHHHHHHHHHHh
Q 022534 256 QKGNPNVVKLQMIEGAGHMPQEDWPEKVVDGLRYFFLN 293 (295)
Q Consensus 256 ~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 293 (295)
++.+++ +++.+++++||++++|+|+++++.|++||.+
T Consensus 218 ~~~~~~-~~~~~~~~~gH~~~~~~p~~~~~~l~~fl~~ 254 (255)
T PRK10673 218 LAQFPQ-ARAHVIAGAGHWVHAEKPDAVLRAIRRYLND 254 (255)
T ss_pred HHhCCC-cEEEEeCCCCCeeeccCHHHHHHHHHHHHhc
Confidence 999987 7999999999999999999999999999974
|
|
| >PRK10749 lysophospholipase L2; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.3e-28 Score=216.12 Aligned_cols=275 Identities=14% Similarity=0.159 Sum_probs=165.6
Q ss_pred cccceeeEEeCcEEEEEEEcCCCCCCCceEEEEcCCCCCCccchhhHHHhhhCCCeEEEeCCCCCCCCCCCCCC-CCCCC
Q 022534 9 GREYGSYIKSGEYRWFVRETGSADSRLGTIVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKG-YDDFD 87 (295)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~vv~lHG~~~~~~~w~~~~~~l~~~~~~via~Dl~G~G~S~~~~~~-~~~~~ 87 (295)
.++.++|+..+|++++|.++++++ ++++||++||++++...|..++..|++.||+|+++|+||||.|+++... .....
T Consensus 29 ~~~~~~~~~~~g~~l~~~~~~~~~-~~~~vll~HG~~~~~~~y~~~~~~l~~~g~~v~~~D~~G~G~S~~~~~~~~~~~~ 107 (330)
T PRK10749 29 QREEAEFTGVDDIPIRFVRFRAPH-HDRVVVICPGRIESYVKYAELAYDLFHLGYDVLIIDHRGQGRSGRLLDDPHRGHV 107 (330)
T ss_pred hccceEEEcCCCCEEEEEEccCCC-CCcEEEEECCccchHHHHHHHHHHHHHCCCeEEEEcCCCCCCCCCCCCCCCcCcc
Confidence 456788899999999999988643 3579999999999999999999888878999999999999999864321 11223
Q ss_pred CCHHHHHHHHHHHHHHh----CCCCceEEEEecccchH-HHHHHHHhCcCccceeEEEcCCCCCCCCCchhhhhhhcccc
Q 022534 88 FTENEFHEELDKLLDVL----EVKYPFFLVVQGFLVGS-YGLTWALKNPSRISKLAILNSPLTASSPLPGLFQQLRIPLL 162 (295)
Q Consensus 88 ~~~~~~~~~l~~~~~~l----~~~~~~~lv~~G~~~G~-~~~~~a~~~p~~v~~lil~~~p~~~~~~~~~~~~~~~~~~~ 162 (295)
++.+++++|+.++++.+ +.. +++++ |||+|+ +++.+|.++|++|+++|+++++.......+...........
T Consensus 108 ~~~~~~~~d~~~~~~~~~~~~~~~-~~~l~--GhSmGG~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~ 184 (330)
T PRK10749 108 ERFNDYVDDLAAFWQQEIQPGPYR-KRYAL--AHSMGGAILTLFLQRHPGVFDAIALCAPMFGIVLPLPSWMARRILNWA 184 (330)
T ss_pred ccHHHHHHHHHHHHHHHHhcCCCC-CeEEE--EEcHHHHHHHHHHHhCCCCcceEEEECchhccCCCCCcHHHHHHHHHH
Confidence 47789999999999876 333 57777 777764 67788899999999999885433221111111000000000
Q ss_pred hhhh-hhh--HHHHHHHHHh-CCCccccccccc--cccccccccC-----CchhHHHHHHHhcchhhhhHhhhcCcCCCC
Q 022534 163 GEFT-AQN--AIMAERFIEA-GSPYVLKLDKAD--VYRLPYLASS-----GPGFALLEAARKVNFKDISSRIGAGFSSGS 231 (295)
Q Consensus 163 ~~~~-~~~--~~~~~~~~~~-~~~~~~~~~~~~--~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (295)
.... ... .....++... .....+...... .....+.... .....+..... . ....+.. ...+
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~-~~~~~~~--~~~~ 257 (330)
T PRK10749 185 EGHPRIRDGYAIGTGRWRPLPFAINVLTHSRERYRRNLRFYADDPELRVGGPTYHWVRESI----L-AGEQVLA--GAGD 257 (330)
T ss_pred HHhcCCCCcCCCCCCCCCCCCcCCCCCCCCHHHHHHHHHHHHhCCCcccCCCcHHHHHHHH----H-HHHHHHh--hccC
Confidence 0000 000 0000000000 000000000000 0000000000 00000000000 0 0001111 1236
Q ss_pred CCCcEEEEEeCCCCCCCcchHHHHHhcCC------CCeEEEEecCCCCCCCCCCh---HHHHHHHHHHHHhc
Q 022534 232 WDKPVLVAWGISDKYLPQSVAEEFQKGNP------NVVKLQMIEGAGHMPQEDWP---EKVVDGLRYFFLNY 294 (295)
Q Consensus 232 ~~~P~l~i~G~~D~~~~~~~~~~~~~~~~------~~~~~~~i~~~gH~~~~e~p---~~~~~~i~~fl~~~ 294 (295)
+++|+|+|+|++|.+++++.+..+++.++ .+++++++|+|||+++.|.+ +.+.+.|.+||++.
T Consensus 258 i~~P~Lii~G~~D~vv~~~~~~~~~~~l~~~~~~~~~~~l~~~~gagH~~~~E~~~~r~~v~~~i~~fl~~~ 329 (330)
T PRK10749 258 ITTPLLLLQAEEERVVDNRMHDRFCEARTAAGHPCEGGKPLVIKGAYHEILFEKDAMRSVALNAIVDFFNRH 329 (330)
T ss_pred CCCCEEEEEeCCCeeeCHHHHHHHHHHHhhcCCCCCCceEEEeCCCcchhhhCCcHHHHHHHHHHHHHHhhc
Confidence 78999999999999999988888876542 23589999999999999876 67889999999864
|
|
| >KOG4409 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.6e-28 Score=207.90 Aligned_cols=272 Identities=20% Similarity=0.259 Sum_probs=165.5
Q ss_pred ccccceeeEEeC--cEEEEEEEcCCCCCCCceEEEEcCCCCCCccchhhHHHhhhCCCeEEEeCCCCCCCCCCCCCCCCC
Q 022534 8 KGREYGSYIKSG--EYRWFVRETGSADSRLGTIVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDD 85 (295)
Q Consensus 8 ~~~~~~~~~~~~--~~~~~~~~~g~~~~~~~~vv~lHG~~~~~~~w~~~~~~l~~~~~~via~Dl~G~G~S~~~~~~~~~ 85 (295)
.-++...++... ...++.. ..+....++|+|||||++++...|-...+.|+. .+.|+++|+||+|+|++|.-.. +
T Consensus 62 ~v~~~~~~v~i~~~~~iw~~~-~~~~~~~~~plVliHGyGAg~g~f~~Nf~~La~-~~~vyaiDllG~G~SSRP~F~~-d 138 (365)
T KOG4409|consen 62 PVPYSKKYVRIPNGIEIWTIT-VSNESANKTPLVLIHGYGAGLGLFFRNFDDLAK-IRNVYAIDLLGFGRSSRPKFSI-D 138 (365)
T ss_pred CCCcceeeeecCCCceeEEEe-ecccccCCCcEEEEeccchhHHHHHHhhhhhhh-cCceEEecccCCCCCCCCCCCC-C
Confidence 344555666653 3444433 333334578999999999999999999999997 7999999999999999986433 2
Q ss_pred CCCCHHHHHHHHHHHHHHhCCCCceEEEEecccchH-HHHHHHHhCcCccceeEEEcCCCCCCC-C-Cc-------hhhh
Q 022534 86 FDFTENEFHEELDKLLDVLEVKYPFFLVVQGFLVGS-YGLTWALKNPSRISKLAILNSPLTASS-P-LP-------GLFQ 155 (295)
Q Consensus 86 ~~~~~~~~~~~l~~~~~~l~~~~~~~lv~~G~~~G~-~~~~~a~~~p~~v~~lil~~~p~~~~~-~-~~-------~~~~ 155 (295)
..-..+.+++.|+++..+.|+++ .+|+ |||.|+ ++..||++||++|++|||++ |+.... + .. ..+.
T Consensus 139 ~~~~e~~fvesiE~WR~~~~L~K-milv--GHSfGGYLaa~YAlKyPerV~kLiLvs-P~Gf~~~~~~~~~~~~~~~~w~ 214 (365)
T KOG4409|consen 139 PTTAEKEFVESIEQWRKKMGLEK-MILV--GHSFGGYLAAKYALKYPERVEKLILVS-PWGFPEKPDSEPEFTKPPPEWY 214 (365)
T ss_pred cccchHHHHHHHHHHHHHcCCcc-eeEe--eccchHHHHHHHHHhChHhhceEEEec-ccccccCCCcchhhcCCChHHH
Confidence 22234679999999999999997 5666 777765 58899999999999999985 543221 1 11 0111
Q ss_pred hhhcccchhhhhhhHHHHHHHHHhCCCcccccc------------cccc-ccccccc-cCC-chhHHHHHHHhc-ch--h
Q 022534 156 QLRIPLLGEFTAQNAIMAERFIEAGSPYVLKLD------------KADV-YRLPYLA-SSG-PGFALLEAARKV-NF--K 217 (295)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~-~~~~~~~-~~~-~~~~~~~~~~~~-~~--~ 217 (295)
....+. ....+....-|++..-.+.+.+.. ..+. ..+-|.. ..+ .|......+... .+ +
T Consensus 215 ~~~~~~---~~~~nPl~~LR~~Gp~Gp~Lv~~~~~d~~~k~~~~~~ed~l~~YiY~~n~~~psgE~~fk~l~~~~g~Ar~ 291 (365)
T KOG4409|consen 215 KALFLV---ATNFNPLALLRLMGPLGPKLVSRLRPDRFRKFPSLIEEDFLHEYIYHCNAQNPSGETAFKNLFEPGGWARR 291 (365)
T ss_pred hhhhhh---hhcCCHHHHHHhccccchHHHhhhhHHHHHhccccchhHHHHHHHHHhcCCCCcHHHHHHHHHhccchhhh
Confidence 100000 111111111222221111111111 1111 1111111 111 222222221111 00 1
Q ss_pred hhhHhhhcCcCCCCCCCcEEEEEeCCCCCCCcchHHHHHhc-CCCCeEEEEecCCCCCCCCCChHHHHHHHHHHHHhc
Q 022534 218 DISSRIGAGFSSGSWDKPVLVAWGISDKYLPQSVAEEFQKG-NPNVVKLQMIEGAGHMPQEDWPEKVVDGLRYFFLNY 294 (295)
Q Consensus 218 ~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~-~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~ 294 (295)
..++++.. -+-+||+++|+|++|++ +...+.++.+. ....++.+++|++||.+.+|+|+.|++.|..++...
T Consensus 292 Pm~~r~~~----l~~~~pv~fiyG~~dWm-D~~~g~~~~~~~~~~~~~~~~v~~aGHhvylDnp~~Fn~~v~~~~~~~ 364 (365)
T KOG4409|consen 292 PMIQRLRE----LKKDVPVTFIYGDRDWM-DKNAGLEVTKSLMKEYVEIIIVPGAGHHVYLDNPEFFNQIVLEECDKV 364 (365)
T ss_pred hHHHHHHh----hccCCCEEEEecCcccc-cchhHHHHHHHhhcccceEEEecCCCceeecCCHHHHHHHHHHHHhcc
Confidence 12222211 12269999999999975 45566666654 333479999999999999999999999999998764
|
|
| >PLN02298 hydrolase, alpha/beta fold family protein | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.5e-28 Score=217.40 Aligned_cols=260 Identities=16% Similarity=0.240 Sum_probs=159.6
Q ss_pred ccceeeEEeCcEEEEEEEcCCCC--CCCceEEEEcCCCCCC-ccchhhHHHhhhCCCeEEEeCCCCCCCCCCCCCCCCCC
Q 022534 10 REYGSYIKSGEYRWFVRETGSAD--SRLGTIVFLHGAPSHS-YSYRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDF 86 (295)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~g~~~--~~~~~vv~lHG~~~~~-~~w~~~~~~l~~~~~~via~Dl~G~G~S~~~~~~~~~~ 86 (295)
++.+.|...+|..++|..++++. +++++|||+||++++. +.|..++..|+++||+|+++|+||||.|+++.. +
T Consensus 32 ~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~VvllHG~~~~~~~~~~~~~~~L~~~Gy~V~~~D~rGhG~S~~~~~----~ 107 (330)
T PLN02298 32 GSKSFFTSPRGLSLFTRSWLPSSSSPPRALIFMVHGYGNDISWTFQSTAIFLAQMGFACFALDLEGHGRSEGLRA----Y 107 (330)
T ss_pred cccceEEcCCCCEEEEEEEecCCCCCCceEEEEEcCCCCCcceehhHHHHHHHhCCCEEEEecCCCCCCCCCccc----c
Confidence 44667777899999998876532 3467899999998764 356677778987799999999999999985432 2
Q ss_pred CCCHHHHHHHHHHHHHHhCCC-----CceEEEEecccch-HHHHHHHHhCcCccceeEEEcCCCCCCCCCchhhhhhhcc
Q 022534 87 DFTENEFHEELDKLLDVLEVK-----YPFFLVVQGFLVG-SYGLTWALKNPSRISKLAILNSPLTASSPLPGLFQQLRIP 160 (295)
Q Consensus 87 ~~~~~~~~~~l~~~~~~l~~~-----~~~~lv~~G~~~G-~~~~~~a~~~p~~v~~lil~~~p~~~~~~~~~~~~~~~~~ 160 (295)
..+.+.+++|+.++++.+... .+++|+ |||+| .+++.++.++|++|+++|++++...........+....
T Consensus 108 ~~~~~~~~~D~~~~i~~l~~~~~~~~~~i~l~--GhSmGG~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~-- 183 (330)
T PLN02298 108 VPNVDLVVEDCLSFFNSVKQREEFQGLPRFLY--GESMGGAICLLIHLANPEGFDGAVLVAPMCKISDKIRPPWPIPQ-- 183 (330)
T ss_pred CCCHHHHHHHHHHHHHHHHhcccCCCCCEEEE--EecchhHHHHHHHhcCcccceeEEEecccccCCcccCCchHHHH--
Confidence 346788999999999987532 356776 67765 56778888999999999998654322111000000000
Q ss_pred cchhhhhhhHHHHHHHHHhC----CCccccccc-----ccccc-ccccccCCchhH-HHHHHHhcchhhhhHhhhcCcCC
Q 022534 161 LLGEFTAQNAIMAERFIEAG----SPYVLKLDK-----ADVYR-LPYLASSGPGFA-LLEAARKVNFKDISSRIGAGFSS 229 (295)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~-----~~~~~-~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 229 (295)
.. ....++.... ......... ..... -+......+... +..... ..+.+... .
T Consensus 184 ----~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~--l 247 (330)
T PLN02298 184 ----IL----TFVARFLPTLAIVPTADLLEKSVKVPAKKIIAKRNPMRYNGKPRLGTVVELLR------VTDYLGKK--L 247 (330)
T ss_pred ----HH----HHHHHHCCCCccccCCCcccccccCHHHHHHHHhCccccCCCccHHHHHHHHH------HHHHHHHh--h
Confidence 00 0001111000 000000000 00000 000000000000 111110 00111111 2
Q ss_pred CCCCCcEEEEEeCCCCCCCcchHHHHHhcCC-CCeEEEEecCCCCCCCCCChHH----HHHHHHHHHHh
Q 022534 230 GSWDKPVLVAWGISDKYLPQSVAEEFQKGNP-NVVKLQMIEGAGHMPQEDWPEK----VVDGLRYFFLN 293 (295)
Q Consensus 230 ~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~~-~~~~~~~i~~~gH~~~~e~p~~----~~~~i~~fl~~ 293 (295)
..+++|+|+|+|++|.+++++.++.+++.++ .++++++++++||+++.|+|+. +.+.|.+||..
T Consensus 248 ~~i~~PvLii~G~~D~ivp~~~~~~l~~~i~~~~~~l~~~~~a~H~~~~e~pd~~~~~~~~~i~~fl~~ 316 (330)
T PLN02298 248 KDVSIPFIVLHGSADVVTDPDVSRALYEEAKSEDKTIKIYDGMMHSLLFGEPDENIEIVRRDILSWLNE 316 (330)
T ss_pred hhcCCCEEEEecCCCCCCCHHHHHHHHHHhccCCceEEEcCCcEeeeecCCCHHHHHHHHHHHHHHHHH
Confidence 3678999999999999999999999887764 2479999999999999998864 66778888865
|
|
| >PRK08775 homoserine O-acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=4.4e-29 Score=221.85 Aligned_cols=265 Identities=18% Similarity=0.235 Sum_probs=154.6
Q ss_pred eEEeCcEEEEEEEcCCCCCCCceEEEEcCCCCCCc------------cchhhHH---HhhhCCCeEEEeCCCCCCCCCCC
Q 022534 15 YIKSGEYRWFVRETGSADSRLGTIVFLHGAPSHSY------------SYRNVMS---QMSDAGFHCFAPDWLGFGFSDKP 79 (295)
Q Consensus 15 ~~~~~~~~~~~~~~g~~~~~~~~vv~lHG~~~~~~------------~w~~~~~---~l~~~~~~via~Dl~G~G~S~~~ 79 (295)
+...+|++++|++.|++. +|+|||||+.+++. .|..+++ .|...+|+||++|+||||.|..
T Consensus 40 ~~~~~~~~l~y~~~G~~~---~p~vll~g~~~~~~~~~~~~~~~~~~~w~~~v~~~~~L~~~~~~Vi~~Dl~G~g~s~~- 115 (343)
T PRK08775 40 HAGLEDLRLRYELIGPAG---APVVFVAGGISAHRHVAATATFPEKGWWEGLVGSGRALDPARFRLLAFDFIGADGSLD- 115 (343)
T ss_pred CCCCCCceEEEEEeccCC---CCEEEEecCCCcccccccccCCCCCCcchhccCCCCccCccccEEEEEeCCCCCCCCC-
Confidence 344578999999988632 25777877766554 6888886 5743479999999999998842
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHHhCCCCceEEEEecccch-HHHHHHHHhCcCccceeEEEcCCCCCCCCCchhhhhh-
Q 022534 80 EKGYDDFDFTENEFHEELDKLLDVLEVKYPFFLVVQGFLVG-SYGLTWALKNPSRISKLAILNSPLTASSPLPGLFQQL- 157 (295)
Q Consensus 80 ~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~~lv~~G~~~G-~~~~~~a~~~p~~v~~lil~~~p~~~~~~~~~~~~~~- 157 (295)
. .|+++++++|+.+++++++++++++++ |||+| .+++.+|.++|++|+++|++++..... +........
T Consensus 116 -~-----~~~~~~~a~dl~~ll~~l~l~~~~~lv--G~SmGG~vA~~~A~~~P~~V~~LvLi~s~~~~~-~~~~~~~~~~ 186 (343)
T PRK08775 116 -V-----PIDTADQADAIALLLDALGIARLHAFV--GYSYGALVGLQFASRHPARVRTLVVVSGAHRAH-PYAAAWRALQ 186 (343)
T ss_pred -C-----CCCHHHHHHHHHHHHHHcCCCcceEEE--EECHHHHHHHHHHHHChHhhheEEEECccccCC-HHHHHHHHHH
Confidence 1 246789999999999999998765566 77765 578899999999999999997643221 100000000
Q ss_pred hcc-cchhh--hhhhH-HHHHHH-HH-hCCCc-cccccccccccccccccCCchhHHH----HHHHhcch---hhhhHhh
Q 022534 158 RIP-LLGEF--TAQNA-IMAERF-IE-AGSPY-VLKLDKADVYRLPYLASSGPGFALL----EAARKVNF---KDISSRI 223 (295)
Q Consensus 158 ~~~-~~~~~--~~~~~-~~~~~~-~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~---~~~~~~~ 223 (295)
+.. ..... ..... .....+ .. ..... .............-.........+. ........ ......+
T Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 266 (343)
T PRK08775 187 RRAVALGQLQCAEKHGLALARQLAMLSYRTPEEFEERFDAPPEVINGRVRVAAEDYLDAAGAQYVARTPVNAYLRLSESI 266 (343)
T ss_pred HHHHHcCCCCCCchhHHHHHHHHHHHHcCCHHHHHHHhCCCccccCCCccchHHHHHHHHHHHHHHhcChhHHHHHHHHH
Confidence 000 00000 00000 000000 00 00000 0000000000000000000000000 00000000 0001111
Q ss_pred hc-CcCCCCCCCcEEEEEeCCCCCCCcchHHHHHhcC-CCCeEEEEecC-CCCCCCCCChHHHHHHHHHHHHh
Q 022534 224 GA-GFSSGSWDKPVLVAWGISDKYLPQSVAEEFQKGN-PNVVKLQMIEG-AGHMPQEDWPEKVVDGLRYFFLN 293 (295)
Q Consensus 224 ~~-~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~-~~~~~~~~i~~-~gH~~~~e~p~~~~~~i~~fl~~ 293 (295)
.. .....++++|+|+|+|++|.+++++...++.+.+ ++ ++++++++ +||++++|+|++|++.|++||.+
T Consensus 267 ~~~~~~l~~I~~PtLvi~G~~D~~~p~~~~~~~~~~i~p~-a~l~~i~~~aGH~~~lE~Pe~~~~~l~~FL~~ 338 (343)
T PRK08775 267 DLHRVDPEAIRVPTVVVAVEGDRLVPLADLVELAEGLGPR-GSLRVLRSPYGHDAFLKETDRIDAILTTALRS 338 (343)
T ss_pred hhcCCChhcCCCCeEEEEeCCCEeeCHHHHHHHHHHcCCC-CeEEEEeCCccHHHHhcCHHHHHHHHHHHHHh
Confidence 00 0112478999999999999999988888888877 55 79999985 99999999999999999999976
|
|
| >PRK07581 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.9e-28 Score=217.55 Aligned_cols=264 Identities=16% Similarity=0.247 Sum_probs=153.3
Q ss_pred CcEEEEEEEcCCCCC-CCceEEEEcCCCCCCccchhhH---HHhhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCCHH---
Q 022534 19 GEYRWFVRETGSADS-RLGTIVFLHGAPSHSYSYRNVM---SQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTEN--- 91 (295)
Q Consensus 19 ~~~~~~~~~~g~~~~-~~~~vv~lHG~~~~~~~w~~~~---~~l~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~--- 91 (295)
+|.+++|.+.|++.+ ..|+||++||+++++..|..++ +.|.+.+|+||++|+||||+|+.+... ...|+.+
T Consensus 24 ~~~~l~y~~~G~~~~~~~~~vll~~~~~~~~~~~~~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~--~~~~~~~~~~ 101 (339)
T PRK07581 24 PDARLAYKTYGTLNAAKDNAILYPTWYSGTHQDNEWLIGPGRALDPEKYFIIIPNMFGNGLSSSPSNT--PAPFNAARFP 101 (339)
T ss_pred CCceEEEEecCccCCCCCCEEEEeCCCCCCcccchhhccCCCccCcCceEEEEecCCCCCCCCCCCCC--CCCCCCCCCC
Confidence 578999999986422 2356777777777777776554 467545799999999999999876421 0123332
Q ss_pred --HHHHHHHH----HHHHhCCCCceEEEEecccch-HHHHHHHHhCcCccceeEEEcCCCCCCCCCchhh-hhhh----c
Q 022534 92 --EFHEELDK----LLDVLEVKYPFFLVVQGFLVG-SYGLTWALKNPSRISKLAILNSPLTASSPLPGLF-QQLR----I 159 (295)
Q Consensus 92 --~~~~~l~~----~~~~l~~~~~~~lv~~G~~~G-~~~~~~a~~~p~~v~~lil~~~p~~~~~~~~~~~-~~~~----~ 159 (295)
.+++++.+ +++++++++.+++| |||+| .+|+.+|.+||++|+++|++++..... ...... .... .
T Consensus 102 ~~~~~~~~~~~~~~l~~~lgi~~~~~lv--G~S~GG~va~~~a~~~P~~V~~Lvli~~~~~~~-~~~~~~~~~~~~~l~~ 178 (339)
T PRK07581 102 HVTIYDNVRAQHRLLTEKFGIERLALVV--GWSMGAQQTYHWAVRYPDMVERAAPIAGTAKTT-PHNFVFLEGLKAALTA 178 (339)
T ss_pred ceeHHHHHHHHHHHHHHHhCCCceEEEE--EeCHHHHHHHHHHHHCHHHHhhheeeecCCCCC-HHHHHHHHHHHHHHHh
Confidence 24566655 77889998644566 77776 578899999999999999986543211 000000 0000 0
Q ss_pred -cc--------chh--hhhhhHHH-----HHHHHHhCCCccccccc-ccccc---ccccccCCch-h-HHHHHHHhcch-
Q 022534 160 -PL--------LGE--FTAQNAIM-----AERFIEAGSPYVLKLDK-ADVYR---LPYLASSGPG-F-ALLEAARKVNF- 216 (295)
Q Consensus 160 -~~--------~~~--~~~~~~~~-----~~~~~~~~~~~~~~~~~-~~~~~---~~~~~~~~~~-~-~~~~~~~~~~~- 216 (295)
+. ... ........ ...+............. .+... ........++ . ..+.......+
T Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 258 (339)
T PRK07581 179 DPAFNGGWYAEPPERGLRAHARVYAGWGFSQAFYRQELWRAMGYASLEDFLVGFWEGNFLPRDPNNLLAMLWTWQRGDIS 258 (339)
T ss_pred CCCCCCCCCCCcHHHHHHHHHHHHHHHHhHHHHHHhhhccccChhhHHHHHHHHHHHhhcccCcccHHHHHHHhhhcccc
Confidence 00 000 00000000 01111100000000000 00000 0000000111 0 00001110000
Q ss_pred ------hhhhHhhhcCcCCCCCCCcEEEEEeCCCCCCCcchHHHHHhcCCCCeEEEEecC-CCCCCCCCChHHHHHHHHH
Q 022534 217 ------KDISSRIGAGFSSGSWDKPVLVAWGISDKYLPQSVAEEFQKGNPNVVKLQMIEG-AGHMPQEDWPEKVVDGLRY 289 (295)
Q Consensus 217 ------~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~-~gH~~~~e~p~~~~~~i~~ 289 (295)
.+.... .+++++|||+|+|++|.+++++.+..+.+.+++ ++++++++ |||++++|+|++++..|++
T Consensus 259 ~~~~~~~d~~~~------L~~I~~PtLvI~G~~D~~~p~~~~~~l~~~ip~-a~l~~i~~~~GH~~~~~~~~~~~~~~~~ 331 (339)
T PRK07581 259 RNPAYGGDLAAA------LGSITAKTFVMPISTDLYFPPEDCEAEAALIPN-AELRPIESIWGHLAGFGQNPADIAFIDA 331 (339)
T ss_pred cCcccCCCHHHH------HhcCCCCEEEEEeCCCCCCCHHHHHHHHHhCCC-CeEEEeCCCCCccccccCcHHHHHHHHH
Confidence 011111 136799999999999999999999999999987 79999999 9999999999999999999
Q ss_pred HHHhc
Q 022534 290 FFLNY 294 (295)
Q Consensus 290 fl~~~ 294 (295)
|+..+
T Consensus 332 ~~~~~ 336 (339)
T PRK07581 332 ALKEL 336 (339)
T ss_pred HHHHH
Confidence 99874
|
|
| >TIGR02427 protocat_pcaD 3-oxoadipate enol-lactonase | Back alignment and domain information |
|---|
Probab=99.96 E-value=6.7e-28 Score=202.92 Aligned_cols=247 Identities=24% Similarity=0.385 Sum_probs=154.7
Q ss_pred EEEEEcCCCCCCCceEEEEcCCCCCCccchhhHHHhhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
Q 022534 23 WFVRETGSADSRLGTIVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEELDKLLD 102 (295)
Q Consensus 23 ~~~~~~g~~~~~~~~vv~lHG~~~~~~~w~~~~~~l~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~l~~~~~ 102 (295)
++|...|+++ .+|+|||+||++.++..|..+++.|.. +|+|+++|+||||.|+.+.. .++.+++++++.++++
T Consensus 2 ~~~~~~g~~~-~~~~li~~hg~~~~~~~~~~~~~~l~~-~~~v~~~d~~G~G~s~~~~~-----~~~~~~~~~~~~~~i~ 74 (251)
T TIGR02427 2 LHYRLDGAAD-GAPVLVFINSLGTDLRMWDPVLPALTP-DFRVLRYDKRGHGLSDAPEG-----PYSIEDLADDVLALLD 74 (251)
T ss_pred ceEEeecCCC-CCCeEEEEcCcccchhhHHHHHHHhhc-ccEEEEecCCCCCCCCCCCC-----CCCHHHHHHHHHHHHH
Confidence 5677777642 357899999999999999999999975 89999999999999976432 4578899999999999
Q ss_pred HhCCCCceEEEEecccch-HHHHHHHHhCcCccceeEEEcCCCCCCCCCchhhhhhhcccch-hhhhhhHHHHHHHHHhC
Q 022534 103 VLEVKYPFFLVVQGFLVG-SYGLTWALKNPSRISKLAILNSPLTASSPLPGLFQQLRIPLLG-EFTAQNAIMAERFIEAG 180 (295)
Q Consensus 103 ~l~~~~~~~lv~~G~~~G-~~~~~~a~~~p~~v~~lil~~~p~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 180 (295)
.++.++ ++++ |||+| .+++.+|.++|++|+++++++++...... ......... +.. ............+....
T Consensus 75 ~~~~~~-v~li--G~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 149 (251)
T TIGR02427 75 HLGIER-AVFC--GLSLGGLIAQGLAARRPDRVRALVLSNTAAKIGTP-ESWNARIAA-VRAEGLAALADAVLERWFTPG 149 (251)
T ss_pred HhCCCc-eEEE--EeCchHHHHHHHHHHCHHHhHHHhhccCccccCch-hhHHHHHhh-hhhccHHHHHHHHHHHHcccc
Confidence 998764 6666 67765 56788889999999999988654321110 000000000 000 00000000011111000
Q ss_pred CCccccccccccccccccccCCchhH-HHHHHHhcchhhhhHhhhcCcCCCCCCCcEEEEEeCCCCCCCcchHHHHHhcC
Q 022534 181 SPYVLKLDKADVYRLPYLASSGPGFA-LLEAARKVNFKDISSRIGAGFSSGSWDKPVLVAWGISDKYLPQSVAEEFQKGN 259 (295)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~ 259 (295)
... ........+..........++. ........ +.... ..++++|+++++|++|.+++.+....+.+..
T Consensus 150 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~------~~~~~~Pvlii~g~~D~~~~~~~~~~~~~~~ 219 (251)
T TIGR02427 150 FRE-AHPARLDLYRNMLVRQPPDGYAGCCAAIRDA---DFRDR------LGAIAVPTLCIAGDQDGSTPPELVREIADLV 219 (251)
T ss_pred ccc-CChHHHHHHHHHHHhcCHHHHHHHHHHHhcc---cHHHH------hhhcCCCeEEEEeccCCcCChHHHHHHHHhC
Confidence 000 0000000000000000000000 00000000 01111 1257899999999999999999888898888
Q ss_pred CCCeEEEEecCCCCCCCCCChHHHHHHHHHHHH
Q 022534 260 PNVVKLQMIEGAGHMPQEDWPEKVVDGLRYFFL 292 (295)
Q Consensus 260 ~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~ 292 (295)
++ .++++++++||++++|+|+++++.|.+|+.
T Consensus 220 ~~-~~~~~~~~~gH~~~~~~p~~~~~~i~~fl~ 251 (251)
T TIGR02427 220 PG-ARFAEIRGAGHIPCVEQPEAFNAALRDFLR 251 (251)
T ss_pred CC-ceEEEECCCCCcccccChHHHHHHHHHHhC
Confidence 87 699999999999999999999999999974
|
Members of this family are 3-oxoadipate enol-lactonase. Note that the substrate is known as 3-oxoadipate enol-lactone, 2-oxo-2,3-dihydrofuran-5-acetate, 4,5-Dihydro-5-oxofuran-2-acetate, and 5-oxo-4,5-dihydrofuran-2-acetate. The enzyme the catalyzes the fourth step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. This enzyme also acts in catechol degradation. In genomes that catabolize both catechol and protocatechuate, two forms of this enzyme may be found. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate. |
| >PRK11126 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.1e-27 Score=202.33 Aligned_cols=232 Identities=15% Similarity=0.180 Sum_probs=136.9
Q ss_pred CceEEEEcCCCCCCccchhhHHHhhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCceEEEE
Q 022534 35 LGTIVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEELDKLLDVLEVKYPFFLVV 114 (295)
Q Consensus 35 ~~~vv~lHG~~~~~~~w~~~~~~l~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~~lv~ 114 (295)
+|+|||+||+++++..|..+++.|+ +|+|+++|+||||.|+.+.. .+.+++++++.++++.+++++ ++++
T Consensus 2 ~p~vvllHG~~~~~~~w~~~~~~l~--~~~vi~~D~~G~G~S~~~~~------~~~~~~~~~l~~~l~~~~~~~-~~lv- 71 (242)
T PRK11126 2 LPWLVFLHGLLGSGQDWQPVGEALP--DYPRLYIDLPGHGGSAAISV------DGFADVSRLLSQTLQSYNILP-YWLV- 71 (242)
T ss_pred CCEEEEECCCCCChHHHHHHHHHcC--CCCEEEecCCCCCCCCCccc------cCHHHHHHHHHHHHHHcCCCC-eEEE-
Confidence 3689999999999999999999983 69999999999999987532 267899999999999998775 6666
Q ss_pred ecccch-HHHHHHHHhCcCc-cceeEEEcCCCCCCCCCchhhhhhhc--ccchhhhhhh-HHHHHHHHHhCCCccccccc
Q 022534 115 QGFLVG-SYGLTWALKNPSR-ISKLAILNSPLTASSPLPGLFQQLRI--PLLGEFTAQN-AIMAERFIEAGSPYVLKLDK 189 (295)
Q Consensus 115 ~G~~~G-~~~~~~a~~~p~~-v~~lil~~~p~~~~~~~~~~~~~~~~--~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 189 (295)
|||+| .+++.+|.++|++ |+++++++++..... .......... .+...+.... ......+.............
T Consensus 72 -G~S~Gg~va~~~a~~~~~~~v~~lvl~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (242)
T PRK11126 72 -GYSLGGRIAMYYACQGLAGGLCGLIVEGGNPGLQN-AEERQARWQNDRQWAQRFRQEPLEQVLADWYQQPVFASLNAEQ 149 (242)
T ss_pred -EECHHHHHHHHHHHhCCcccccEEEEeCCCCCCCC-HHHHHHHHhhhHHHHHHhccCcHHHHHHHHHhcchhhccCccH
Confidence 77765 5788888998765 999998865432111 0100000000 0000000000 00011111000000000000
Q ss_pred cccccccccccCCchhHHHHHHHhcch---hhhhHhhhcCcCCCCCCCcEEEEEeCCCCCCCcchHHHHHhcCCCCeEEE
Q 022534 190 ADVYRLPYLASSGPGFALLEAARKVNF---KDISSRIGAGFSSGSWDKPVLVAWGISDKYLPQSVAEEFQKGNPNVVKLQ 266 (295)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~ 266 (295)
...+.. ......+............ .+.... ..+++||+++|+|++|+.+. .+.+. .+ ++++
T Consensus 150 ~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~------l~~i~~P~lii~G~~D~~~~-----~~~~~-~~-~~~~ 214 (242)
T PRK11126 150 RQQLVA--KRSNNNGAAVAAMLEATSLAKQPDLRPA------LQALTFPFYYLCGERDSKFQ-----ALAQQ-LA-LPLH 214 (242)
T ss_pred HHHHHH--hcccCCHHHHHHHHHhcCcccCCcHHHH------hhccCCCeEEEEeCCcchHH-----HHHHH-hc-CeEE
Confidence 000000 0000001111111100000 011111 13679999999999998542 23333 23 7999
Q ss_pred EecCCCCCCCCCChHHHHHHHHHHHHh
Q 022534 267 MIEGAGHMPQEDWPEKVVDGLRYFFLN 293 (295)
Q Consensus 267 ~i~~~gH~~~~e~p~~~~~~i~~fl~~ 293 (295)
++++|||++++|+|+++++.|..|+..
T Consensus 215 ~i~~~gH~~~~e~p~~~~~~i~~fl~~ 241 (242)
T PRK11126 215 VIPNAGHNAHRENPAAFAASLAQILRL 241 (242)
T ss_pred EeCCCCCchhhhChHHHHHHHHHHHhh
Confidence 999999999999999999999999975
|
|
| >TIGR01738 bioH putative pimeloyl-BioC--CoA transferase BioH | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.8e-27 Score=199.77 Aligned_cols=234 Identities=21% Similarity=0.270 Sum_probs=139.6
Q ss_pred CceEEEEcCCCCCCccchhhHHHhhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCceEEEE
Q 022534 35 LGTIVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEELDKLLDVLEVKYPFFLVV 114 (295)
Q Consensus 35 ~~~vv~lHG~~~~~~~w~~~~~~l~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~~lv~ 114 (295)
+|+|||+||+++++..|..+++.|++ +|+|+++|+||||.|+... .++.+++++++.+.+ +++++++
T Consensus 4 ~~~iv~~HG~~~~~~~~~~~~~~l~~-~~~vi~~d~~G~G~s~~~~------~~~~~~~~~~~~~~~-----~~~~~lv- 70 (245)
T TIGR01738 4 NVHLVLIHGWGMNAEVFRCLDEELSA-HFTLHLVDLPGHGRSRGFG------PLSLADAAEAIAAQA-----PDPAIWL- 70 (245)
T ss_pred CceEEEEcCCCCchhhHHHHHHhhcc-CeEEEEecCCcCccCCCCC------CcCHHHHHHHHHHhC-----CCCeEEE-
Confidence 36899999999999999999999985 7999999999999997542 235667776665543 2357777
Q ss_pred ecccchH-HHHHHHHhCcCccceeEEEcCCCCCC--CCCchhhh-hhhcccchhhhhhhHHHHHHHHHh---CCCccccc
Q 022534 115 QGFLVGS-YGLTWALKNPSRISKLAILNSPLTAS--SPLPGLFQ-QLRIPLLGEFTAQNAIMAERFIEA---GSPYVLKL 187 (295)
Q Consensus 115 ~G~~~G~-~~~~~a~~~p~~v~~lil~~~p~~~~--~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~ 187 (295)
|||+|+ +++.+|.++|++++++|++++..... ..++.... .....+...+.........++... ..... ..
T Consensus 71 -G~S~Gg~~a~~~a~~~p~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 148 (245)
T TIGR01738 71 -GWSLGGLVALHIAATHPDRVRALVTVASSPCFSAREDWPEGIKPDVLTGFQQQLSDDYQRTIERFLALQTLGTPTA-RQ 148 (245)
T ss_pred -EEcHHHHHHHHHHHHCHHhhheeeEecCCcccccCCcccccCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCcc-ch
Confidence 667664 67888899999999999886532211 11110000 000000000000000001111110 00000 00
Q ss_pred cccccccccccccCCch-hHHHHHHHhcchhhhhHhhhcCcCCCCCCCcEEEEEeCCCCCCCcchHHHHHhcCCCCeEEE
Q 022534 188 DKADVYRLPYLASSGPG-FALLEAARKVNFKDISSRIGAGFSSGSWDKPVLVAWGISDKYLPQSVAEEFQKGNPNVVKLQ 266 (295)
Q Consensus 188 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~ 266 (295)
....... .+.....+. ..+..........+....+ .++++|+++|+|++|.+++++....+.+.+++ ++++
T Consensus 149 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l------~~i~~Pvlii~g~~D~~~~~~~~~~~~~~~~~-~~~~ 220 (245)
T TIGR01738 149 DARALKQ-TLLARPTPNVQVLQAGLEILATVDLRQPL------QNISVPFLRLYGYLDGLVPAKVVPYLDKLAPH-SELY 220 (245)
T ss_pred HHHHHHH-HhhccCCCCHHHHHHHHHHhhcccHHHHH------hcCCCCEEEEeecCCcccCHHHHHHHHHhCCC-CeEE
Confidence 0000000 000000010 0111111000000111111 26789999999999999999888889888986 7999
Q ss_pred EecCCCCCCCCCChHHHHHHHHHHH
Q 022534 267 MIEGAGHMPQEDWPEKVVDGLRYFF 291 (295)
Q Consensus 267 ~i~~~gH~~~~e~p~~~~~~i~~fl 291 (295)
+++++||++++|+|++|++.|.+|+
T Consensus 221 ~~~~~gH~~~~e~p~~~~~~i~~fi 245 (245)
T TIGR01738 221 IFAKAAHAPFLSHAEAFCALLVAFK 245 (245)
T ss_pred EeCCCCCCccccCHHHHHHHHHhhC
Confidence 9999999999999999999999995
|
This CoA-binding enzyme is required for the production of pimeloyl-coenzyme A, the substrate of the BioF protein early in the biosynthesis of biotin. Its exact function is unknown, but is proposed in ref 2. This enzyme belongs to the alpha/beta hydrolase fold family (pfam model pfam00561). Members of this family are restricted to the Proteobacteria. |
| >PRK00175 metX homoserine O-acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.5e-27 Score=214.53 Aligned_cols=267 Identities=16% Similarity=0.182 Sum_probs=156.2
Q ss_pred CcEEEEEEEcCCCCC-CCceEEEEcCCCCCCcc-------------chhhHH---HhhhCCCeEEEeCCCC-CCCCCCCC
Q 022534 19 GEYRWFVRETGSADS-RLGTIVFLHGAPSHSYS-------------YRNVMS---QMSDAGFHCFAPDWLG-FGFSDKPE 80 (295)
Q Consensus 19 ~~~~~~~~~~g~~~~-~~~~vv~lHG~~~~~~~-------------w~~~~~---~l~~~~~~via~Dl~G-~G~S~~~~ 80 (295)
+|.+++|.++|++++ .+|+|||+||+++++.. |..++. .|...+|+||++|+|| ||.|+.+.
T Consensus 31 ~~~~~~y~~~G~~~~~~~p~vvl~HG~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~l~~~~~~vi~~Dl~G~~~~s~~~~ 110 (379)
T PRK00175 31 PPVELAYETYGTLNADRSNAVLICHALTGDHHVAGPHSPDDPKPGWWDNMVGPGKPIDTDRYFVICSNVLGGCKGSTGPS 110 (379)
T ss_pred CCceEEEEeccccCCCCCCEEEEeCCcCCchhhcccccccCCCCcchhhccCCCCccCccceEEEeccCCCCCCCCCCCC
Confidence 568899999986322 25799999999998874 666652 3323489999999999 36665432
Q ss_pred CCC----CC-----CCCCHHHHHHHHHHHHHHhCCCCceEEEEecccch-HHHHHHHHhCcCccceeEEEcCCCCCCCCC
Q 022534 81 KGY----DD-----FDFTENEFHEELDKLLDVLEVKYPFFLVVQGFLVG-SYGLTWALKNPSRISKLAILNSPLTASSPL 150 (295)
Q Consensus 81 ~~~----~~-----~~~~~~~~~~~l~~~~~~l~~~~~~~lv~~G~~~G-~~~~~~a~~~p~~v~~lil~~~p~~~~~~~ 150 (295)
... .. ..|+++++++++.++++++++++.++++ |||+| .+++.+|.++|++|+++|++++........
T Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~lv--G~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~ 188 (379)
T PRK00175 111 SINPDTGKPYGSDFPVITIRDWVRAQARLLDALGITRLAAVV--GGSMGGMQALEWAIDYPDRVRSALVIASSARLSAQN 188 (379)
T ss_pred CCCCCCCCcccCCCCcCCHHHHHHHHHHHHHHhCCCCceEEE--EECHHHHHHHHHHHhChHhhhEEEEECCCcccCHHH
Confidence 100 00 1578999999999999999998744566 77776 568899999999999999997644321100
Q ss_pred chhh----hhhhc-cc-c-hhh-----hhhhHHHHHHH------------HHhCCCccccccc---------cccccc--
Q 022534 151 PGLF----QQLRI-PL-L-GEF-----TAQNAIMAERF------------IEAGSPYVLKLDK---------ADVYRL-- 195 (295)
Q Consensus 151 ~~~~----~~~~~-~~-~-~~~-----~~~~~~~~~~~------------~~~~~~~~~~~~~---------~~~~~~-- 195 (295)
.... ..... +. . +.+ .........++ ............. ...+..
T Consensus 189 ~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~r~~~~~~~~s~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~ 268 (379)
T PRK00175 189 IAFNEVARQAILADPDWHGGDYYEHGVVPERGLAVARMIGHITYLSDDELDEKFGRELQSGELPFGFDVEFQVESYLRYQ 268 (379)
T ss_pred HHHHHHHHHHHHhCCCCCCCCcccCCCChhHHHHHHHHHHHHHhcCHHHHHhhcCccccccccccCCCccchHHHHHHHH
Confidence 0000 00000 00 0 000 00000000010 0000000000000 000000
Q ss_pred --cccccCCc-hhH-HHHHHHhcch-----hhhhHhhhcCcCCCCCCCcEEEEEeCCCCCCCcchHHHHHhcCCCC---e
Q 022534 196 --PYLASSGP-GFA-LLEAARKVNF-----KDISSRIGAGFSSGSWDKPVLVAWGISDKYLPQSVAEEFQKGNPNV---V 263 (295)
Q Consensus 196 --~~~~~~~~-~~~-~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~---~ 263 (295)
.+....++ .+. ........+. .+.... .+++++|||+|+|++|.+++++.++.+++.+++. +
T Consensus 269 ~~~~~~~~d~~~~~~~~~~~~~~d~~~~~~~d~~~~------l~~I~~PtLvI~G~~D~~~p~~~~~~la~~i~~a~~~~ 342 (379)
T PRK00175 269 GDKFVERFDANSYLYLTRALDYFDPARGRGGDLAAA------LARIKARFLVVSFTSDWLFPPARSREIVDALLAAGADV 342 (379)
T ss_pred HHHHhhccCchHHHHHHHHHHhccccCCCCCCHHHH------HhcCCCCEEEEEECCccccCHHHHHHHHHHHHhcCCCe
Confidence 00000000 000 0011110100 001111 1378999999999999999999999999988862 2
Q ss_pred EEEEec-CCCCCCCCCChHHHHHHHHHHHHh
Q 022534 264 KLQMIE-GAGHMPQEDWPEKVVDGLRYFFLN 293 (295)
Q Consensus 264 ~~~~i~-~~gH~~~~e~p~~~~~~i~~fl~~ 293 (295)
++++++ +|||++++|+|++|+++|++||..
T Consensus 343 ~l~~i~~~~GH~~~le~p~~~~~~L~~FL~~ 373 (379)
T PRK00175 343 SYAEIDSPYGHDAFLLDDPRYGRLVRAFLER 373 (379)
T ss_pred EEEEeCCCCCchhHhcCHHHHHHHHHHHHHh
Confidence 777775 999999999999999999999975
|
|
| >TIGR01392 homoserO_Ac_trn homoserine O-acetyltransferase | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.2e-27 Score=213.18 Aligned_cols=266 Identities=18% Similarity=0.245 Sum_probs=155.1
Q ss_pred eCcEEEEEEEcCCCC-CCCceEEEEcCCCCCCc-----------cchhhHH---HhhhCCCeEEEeCCCC--CCCCCCCC
Q 022534 18 SGEYRWFVRETGSAD-SRLGTIVFLHGAPSHSY-----------SYRNVMS---QMSDAGFHCFAPDWLG--FGFSDKPE 80 (295)
Q Consensus 18 ~~~~~~~~~~~g~~~-~~~~~vv~lHG~~~~~~-----------~w~~~~~---~l~~~~~~via~Dl~G--~G~S~~~~ 80 (295)
.+|.+++|.++|+++ ..+++|||+||+++++. .|+.++. .|...+|+|+++|+|| ||.|....
T Consensus 13 ~~~~~~~y~~~g~~~~~~~~~vll~Hg~~~~~~~~~~~~~~~~~~w~~~~~~~~~l~~~~~~vi~~D~~G~~~g~s~~~~ 92 (351)
T TIGR01392 13 LSDVRVAYETYGTLNAERSNAVLVCHALTGDAHVAGYHDDGDPGWWDDLIGPGRAIDTDRYFVVCSNVLGGCYGSTGPSS 92 (351)
T ss_pred cCCceEEEEeccccCCCCCCEEEEcCCcCcchhhcccCCCCCCCchhhccCCCCCcCCCceEEEEecCCCCCCCCCCCCC
Confidence 467899999999632 22469999999998763 4777762 4544589999999999 55554311
Q ss_pred ---CC--C--CCCCCCHHHHHHHHHHHHHHhCCCCceEEEEecccch-HHHHHHHHhCcCccceeEEEcCCCCCCCCCch
Q 022534 81 ---KG--Y--DDFDFTENEFHEELDKLLDVLEVKYPFFLVVQGFLVG-SYGLTWALKNPSRISKLAILNSPLTASSPLPG 152 (295)
Q Consensus 81 ---~~--~--~~~~~~~~~~~~~l~~~~~~l~~~~~~~lv~~G~~~G-~~~~~~a~~~p~~v~~lil~~~p~~~~~~~~~ 152 (295)
.. + +...|+++++++++.++++++++++.++++ |||+| .+++.+|.++|++|+++|+++++.........
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~--G~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~ 170 (351)
T TIGR01392 93 INPGGRPYGSDFPLITIRDDVKAQKLLLDHLGIEQIAAVV--GGSMGGMQALEWAIDYPERVRAIVVLATSARHSAWCIA 170 (351)
T ss_pred CCCCCCcCCCCCCCCcHHHHHHHHHHHHHHcCCCCceEEE--EECHHHHHHHHHHHHChHhhheEEEEccCCcCCHHHHH
Confidence 01 1 012478999999999999999998635566 77776 46888999999999999999765432211000
Q ss_pred hhhh----hhc-c-cc-hhhhh----hhHHHHHH------------HHHhCCCccccc---c-------cccccc-c---
Q 022534 153 LFQQ----LRI-P-LL-GEFTA----QNAIMAER------------FIEAGSPYVLKL---D-------KADVYR-L--- 195 (295)
Q Consensus 153 ~~~~----~~~-~-~~-~~~~~----~~~~~~~~------------~~~~~~~~~~~~---~-------~~~~~~-~--- 195 (295)
.... ... + +. +.+.. .......+ +.....+..... . ....+. .
T Consensus 171 ~~~~~~~~~~~~~~~~~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (351)
T TIGR01392 171 FNEVQRQAILADPNWNDGDYYEDGQPDRGLALARMLAHLTYRSEESMAERFGRAPQSGESPASGFDTRFQVESYLRYQGD 250 (351)
T ss_pred HHHHHHHHHHhCCCCCCCCCCCCCChhhHHHHHHHHHHHhcCCHHHHHHHhCcCcccccccccccCccchHHHHHHHHHH
Confidence 0000 000 0 00 00000 00000000 000000000000 0 000000 0
Q ss_pred cccccCCc-hh-HHHHHHHhcchh----hhhHhhhcCcCCCCCCCcEEEEEeCCCCCCCcchHHHHHhcCCCCeEEE---
Q 022534 196 PYLASSGP-GF-ALLEAARKVNFK----DISSRIGAGFSSGSWDKPVLVAWGISDKYLPQSVAEEFQKGNPNVVKLQ--- 266 (295)
Q Consensus 196 ~~~~~~~~-~~-~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~--- 266 (295)
.+....++ .+ .....+...+.. +.... .+++++|+|+|+|++|.+++++.++.+++.+++ .+++
T Consensus 251 ~~~~~~d~~~~~~~~~~l~~~d~~~~~~~~~~~------l~~I~~P~Lvi~G~~D~~~p~~~~~~~a~~i~~-~~~~v~~ 323 (351)
T TIGR01392 251 KFVDRFDANSYLYLTRALDTHDLGRGRGSLTEA------LSRIKAPFLVVSITSDWLFPPAESRELAKALPA-AGLRVTY 323 (351)
T ss_pred HHHhhcCcchHHHHHHHHHhcCCcCCCCCHHHH------HhhCCCCEEEEEeCCccccCHHHHHHHHHHHhh-cCCceEE
Confidence 00000000 00 001111111100 01111 236789999999999999999999999999987 4655
Q ss_pred --EecCCCCCCCCCChHHHHHHHHHHHH
Q 022534 267 --MIEGAGHMPQEDWPEKVVDGLRYFFL 292 (295)
Q Consensus 267 --~i~~~gH~~~~e~p~~~~~~i~~fl~ 292 (295)
++++|||++++|+|++|++.|.+||.
T Consensus 324 ~~i~~~~GH~~~le~p~~~~~~l~~FL~ 351 (351)
T TIGR01392 324 VEIESPYGHDAFLVETDQVEELIRGFLR 351 (351)
T ss_pred EEeCCCCCcchhhcCHHHHHHHHHHHhC
Confidence 66899999999999999999999984
|
This family describes homoserine-O-acetyltransferase, an enzyme of methionine biosynthesis. This model has been rebuilt to identify sequences more broadly, including a number of sequences suggested to be homoserine O-acetyltransferase based on proximity to other Met biosynthesis genes. |
| >PLN02211 methyl indole-3-acetate methyltransferase | Back alignment and domain information |
|---|
Probab=99.95 E-value=7.8e-27 Score=200.82 Aligned_cols=259 Identities=16% Similarity=0.133 Sum_probs=152.1
Q ss_pred CcEEEEEEEcCCCCCCCceEEEEcCCCCCCccchhhHHHhhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH
Q 022534 19 GEYRWFVRETGSADSRLGTIVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEELD 98 (295)
Q Consensus 19 ~~~~~~~~~~g~~~~~~~~vv~lHG~~~~~~~w~~~~~~l~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~l~ 98 (295)
||-+++|.+ ++..+|+|||+||++.+...|..+++.|+++||+|+++|+||||+|..... ..++++++++++.
T Consensus 5 ~~~~~~~~~---~~~~~p~vvliHG~~~~~~~w~~~~~~L~~~g~~vi~~dl~g~G~s~~~~~----~~~~~~~~~~~l~ 77 (273)
T PLN02211 5 NGEEVTDMK---PNRQPPHFVLIHGISGGSWCWYKIRCLMENSGYKVTCIDLKSAGIDQSDAD----SVTTFDEYNKPLI 77 (273)
T ss_pred ccccccccc---ccCCCCeEEEECCCCCCcCcHHHHHHHHHhCCCEEEEecccCCCCCCCCcc----cCCCHHHHHHHHH
Confidence 566666654 222357899999999999999999999987799999999999999864321 1257889999999
Q ss_pred HHHHHhCCCCceEEEEecccchH-HHHHHHHhCcCccceeEEEcCCCCCCCCCchhhhhh--hcccchhhhhhhHHHHHH
Q 022534 99 KLLDVLEVKYPFFLVVQGFLVGS-YGLTWALKNPSRISKLAILNSPLTASSPLPGLFQQL--RIPLLGEFTAQNAIMAER 175 (295)
Q Consensus 99 ~~~~~l~~~~~~~lv~~G~~~G~-~~~~~a~~~p~~v~~lil~~~p~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~ 175 (295)
+++++++..++++|| |||+|+ ++..++.++|++|+++|++++......... .... ..+....+. ..+...
T Consensus 78 ~~i~~l~~~~~v~lv--GhS~GG~v~~~~a~~~p~~v~~lv~~~~~~~~~g~~~--~~~~~~~~~~~~~~~---~~~~~~ 150 (273)
T PLN02211 78 DFLSSLPENEKVILV--GHSAGGLSVTQAIHRFPKKICLAVYVAATMLKLGFQT--DEDMKDGVPDLSEFG---DVYELG 150 (273)
T ss_pred HHHHhcCCCCCEEEE--EECchHHHHHHHHHhChhheeEEEEeccccCCCCCCH--HHHHhccccchhhhc---cceeee
Confidence 999998533457777 677764 567778889999999999854221110000 0000 000000000 000000
Q ss_pred HH-HhCCCccccccccccccccccccCCchh-HHHHHHHh-cchhhhhHhhhcCcCCCCC-CCcEEEEEeCCCCCCCcch
Q 022534 176 FI-EAGSPYVLKLDKADVYRLPYLASSGPGF-ALLEAARK-VNFKDISSRIGAGFSSGSW-DKPVLVAWGISDKYLPQSV 251 (295)
Q Consensus 176 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~-~~~~~~~~~~~~~~~~~~~-~~P~l~i~G~~D~~~~~~~ 251 (295)
+. ...................+........ .+...... ............. ...++ ++|+++|+|++|.++|++.
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~vP~l~I~g~~D~~ip~~~ 229 (273)
T PLN02211 151 FGLGPDQPPTSAIIKKEFRRKILYQMSPQEDSTLAAMLLRPGPILALRSARFEE-ETGDIDKVPRVYIKTLHDHVVKPEQ 229 (273)
T ss_pred eccCCCCCCceeeeCHHHHHHHHhcCCCHHHHHHHHHhcCCcCccccccccccc-cccccCccceEEEEeCCCCCCCHHH
Confidence 00 0000000000000000000000000000 00000000 0000000000000 01245 7999999999999999999
Q ss_pred HHHHHhcCCCCeEEEEecCCCCCCCCCChHHHHHHHHHHHHhc
Q 022534 252 AEEFQKGNPNVVKLQMIEGAGHMPQEDWPEKVVDGLRYFFLNY 294 (295)
Q Consensus 252 ~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~ 294 (295)
.+.+.+.++. .+++.++ +||.+++++|++|.+.|.++..++
T Consensus 230 ~~~m~~~~~~-~~~~~l~-~gH~p~ls~P~~~~~~i~~~a~~~ 270 (273)
T PLN02211 230 QEAMIKRWPP-SQVYELE-SDHSPFFSTPFLLFGLLIKAAASV 270 (273)
T ss_pred HHHHHHhCCc-cEEEEEC-CCCCccccCHHHHHHHHHHHHHHh
Confidence 9999999886 5899996 899999999999999999987664
|
|
| >KOG1454 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.95 E-value=4.1e-27 Score=205.90 Aligned_cols=245 Identities=26% Similarity=0.362 Sum_probs=149.8
Q ss_pred CCceEEEEcCCCCCCccchhhHHHhhhC-CCeEEEeCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCceEE
Q 022534 34 RLGTIVFLHGAPSHSYSYRNVMSQMSDA-GFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEELDKLLDVLEVKYPFFL 112 (295)
Q Consensus 34 ~~~~vv~lHG~~~~~~~w~~~~~~l~~~-~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~~l 112 (295)
.+++||++|||+++...|+++++.|... |++|+++|++|||.|+..... ..|+..++...+..++...+.++ +++
T Consensus 57 ~~~pvlllHGF~~~~~~w~~~~~~L~~~~~~~v~aiDl~G~g~~s~~~~~---~~y~~~~~v~~i~~~~~~~~~~~-~~l 132 (326)
T KOG1454|consen 57 DKPPVLLLHGFGASSFSWRRVVPLLSKAKGLRVLAIDLPGHGYSSPLPRG---PLYTLRELVELIRRFVKEVFVEP-VSL 132 (326)
T ss_pred CCCcEEEeccccCCcccHhhhccccccccceEEEEEecCCCCcCCCCCCC---CceehhHHHHHHHHHHHhhcCcc-eEE
Confidence 4689999999999999999999999864 399999999999966554332 24788899999999999887765 778
Q ss_pred EEecccchH-HHHHHHHhCcCccceeE---EEcCCCCCCCCCchhhhh-hhc-c----cchhhhhhhH--HHHHHHHHhC
Q 022534 113 VVQGFLVGS-YGLTWALKNPSRISKLA---ILNSPLTASSPLPGLFQQ-LRI-P----LLGEFTAQNA--IMAERFIEAG 180 (295)
Q Consensus 113 v~~G~~~G~-~~~~~a~~~p~~v~~li---l~~~p~~~~~~~~~~~~~-~~~-~----~~~~~~~~~~--~~~~~~~~~~ 180 (295)
+ |||.|+ +|..+|+.+|+.|++++ +++++............. +.. . .......... ..........
T Consensus 133 v--ghS~Gg~va~~~Aa~~P~~V~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~ 210 (326)
T KOG1454|consen 133 V--GHSLGGIVALKAAAYYPETVDSLVLLDLLGPPVYSTPKGIKGLRRLLDKFLSALELLIPLSLTEPVRLVSEGLLRCL 210 (326)
T ss_pred E--EeCcHHHHHHHHHHhCcccccceeeecccccccccCCcchhHHHHhhhhhccHhhhcCccccccchhheeHhhhcce
Confidence 7 677765 58889999999999999 554444432222111100 000 0 0000000000 0000000000
Q ss_pred -CC-ccccccccccccccccccCCchhHHHHHHH-----hcch-hhhhHhhhcCcCCCCC-CCcEEEEEeCCCCCCCcch
Q 022534 181 -SP-YVLKLDKADVYRLPYLASSGPGFALLEAAR-----KVNF-KDISSRIGAGFSSGSW-DKPVLVAWGISDKYLPQSV 251 (295)
Q Consensus 181 -~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~-~~~~~~~~~~~~~~~~-~~P~l~i~G~~D~~~~~~~ 251 (295)
.. ............. ..... ..-+....+ .... ....... .+++ +||+|+|+|++|++++.+.
T Consensus 211 ~~~~~~~~~~~~~~~~~--~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~i~~~pvlii~G~~D~~~p~~~ 282 (326)
T KOG1454|consen 211 KVVYTDPSRLLEKLLHL--LSRPV-KEHFHRDARLSLFLELLGFDENLLSL-----IKKIWKCPVLIIWGDKDQIVPLEL 282 (326)
T ss_pred eeeccccccchhhhhhh--eeccc-ccchhhhheeeEEEeccCccchHHHh-----hccccCCceEEEEcCcCCccCHHH
Confidence 00 0000000000000 00000 000000000 0000 0011100 1233 5999999999999999999
Q ss_pred HHHHHhcCCCCeEEEEecCCCCCCCCCChHHHHHHHHHHHHh
Q 022534 252 AEEFQKGNPNVVKLQMIEGAGHMPQEDWPEKVVDGLRYFFLN 293 (295)
Q Consensus 252 ~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 293 (295)
+..+.+.+++ +++++|++|||.+|+|.|++|++.|..|+..
T Consensus 283 ~~~~~~~~pn-~~~~~I~~~gH~~h~e~Pe~~~~~i~~Fi~~ 323 (326)
T KOG1454|consen 283 AEELKKKLPN-AELVEIPGAGHLPHLERPEEVAALLRSFIAR 323 (326)
T ss_pred HHHHHhhCCC-ceEEEeCCCCcccccCCHHHHHHHHHHHHHH
Confidence 9999998886 7999999999999999999999999999976
|
|
| >PLN02894 hydrolase, alpha/beta fold family protein | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.5e-26 Score=209.03 Aligned_cols=261 Identities=20% Similarity=0.269 Sum_probs=147.6
Q ss_pred EEEEEEcCCCCCCCceEEEEcCCCCCCccchhhHHHhhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH
Q 022534 22 RWFVRETGSADSRLGTIVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEELDKLL 101 (295)
Q Consensus 22 ~~~~~~~g~~~~~~~~vv~lHG~~~~~~~w~~~~~~l~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~l~~~~ 101 (295)
++....+.. +..+|+|||+||+++++..|..+++.|++ +|+|+++|+||||.|+++...........+.+++++.+++
T Consensus 93 ~~~~~~~~~-~~~~p~vvllHG~~~~~~~~~~~~~~L~~-~~~vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~i~~~~ 170 (402)
T PLN02894 93 FINTVTFDS-KEDAPTLVMVHGYGASQGFFFRNFDALAS-RFRVIAIDQLGWGGSSRPDFTCKSTEETEAWFIDSFEEWR 170 (402)
T ss_pred eEEEEEecC-CCCCCEEEEECCCCcchhHHHHHHHHHHh-CCEEEEECCCCCCCCCCCCcccccHHHHHHHHHHHHHHHH
Confidence 444444332 23458999999999999999999999986 6999999999999998754221110111234678888999
Q ss_pred HHhCCCCceEEEEecccch-HHHHHHHHhCcCccceeEEEcCCCCCCCCCc--hhhhhhhcccchh---------hhhh-
Q 022534 102 DVLEVKYPFFLVVQGFLVG-SYGLTWALKNPSRISKLAILNSPLTASSPLP--GLFQQLRIPLLGE---------FTAQ- 168 (295)
Q Consensus 102 ~~l~~~~~~~lv~~G~~~G-~~~~~~a~~~p~~v~~lil~~~p~~~~~~~~--~~~~~~~~~~~~~---------~~~~- 168 (295)
+.++++ +++++ |||+| .+++.+|.++|++|+++|+++++........ .........+.+. +...
T Consensus 171 ~~l~~~-~~~lv--GhS~GG~la~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~ 247 (402)
T PLN02894 171 KAKNLS-NFILL--GHSFGGYVAAKYALKHPEHVQHLILVGPAGFSSESDDKSEWLTKFRATWKGAVLNHLWESNFTPQK 247 (402)
T ss_pred HHcCCC-CeEEE--EECHHHHHHHHHHHhCchhhcEEEEECCccccCCcchhHHHHhhcchhHHHHHHHHHhhcCCCHHH
Confidence 988887 46776 67766 4678889999999999999864332211100 0000000000000 0000
Q ss_pred --------hHHHHHHHHHhC-----CCccccccccccc-cccc--cccCCchhHHHHHHHhcc---hhhhhHhhhcCcCC
Q 022534 169 --------NAIMAERFIEAG-----SPYVLKLDKADVY-RLPY--LASSGPGFALLEAARKVN---FKDISSRIGAGFSS 229 (295)
Q Consensus 169 --------~~~~~~~~~~~~-----~~~~~~~~~~~~~-~~~~--~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~ 229 (295)
...+..++.... ............+ ...+ ......+........... ..+.... .
T Consensus 248 ~~~~~gp~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------l 321 (402)
T PLN02894 248 IIRGLGPWGPNLVRRYTTARFGAHSTGDILSEEESKLLTDYVYHTLAAKASGELCLKYIFSFGAFARKPLLES------A 321 (402)
T ss_pred HHHhccchhHHHHHHHHHHHhhhcccccccCcchhhHHHHHHHHhhcCCCchHHHHHHhccCchhhcchHhhh------c
Confidence 000001111000 0000000000000 0000 000001111001110000 0011111 2
Q ss_pred CCCCCcEEEEEeCCCCCCCcchHHHHHhcCCCCeEEEEecCCCCCCCCCChHHHHHHHHHHHHhc
Q 022534 230 GSWDKPVLVAWGISDKYLPQSVAEEFQKGNPNVVKLQMIEGAGHMPQEDWPEKVVDGLRYFFLNY 294 (295)
Q Consensus 230 ~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~ 294 (295)
.++++|+++|+|++|.+.+ .....+.+..+..++++++++|||++++|+|++|+++|.+|++++
T Consensus 322 ~~I~vP~liI~G~~D~i~~-~~~~~~~~~~~~~~~~~~i~~aGH~~~~E~P~~f~~~l~~~~~~~ 385 (402)
T PLN02894 322 SEWKVPTTFIYGRHDWMNY-EGAVEARKRMKVPCEIIRVPQGGHFVFLDNPSGFHSAVLYACRKY 385 (402)
T ss_pred ccCCCCEEEEEeCCCCCCc-HHHHHHHHHcCCCCcEEEeCCCCCeeeccCHHHHHHHHHHHHHHh
Confidence 3679999999999998764 555566655543478999999999999999999999999998764
|
|
| >COG2267 PldB Lysophospholipase [Lipid metabolism] | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.1e-26 Score=199.47 Aligned_cols=273 Identities=22% Similarity=0.330 Sum_probs=170.1
Q ss_pred ccccceeeEEeCcEEEEEEEcCCCCCCCceEEEEcCCCCCCccchhhHHHhhhCCCeEEEeCCCCCCCCC-CCCCCCCCC
Q 022534 8 KGREYGSYIKSGEYRWFVRETGSADSRLGTIVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGFGFSD-KPEKGYDDF 86 (295)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~vv~lHG~~~~~~~w~~~~~~l~~~~~~via~Dl~G~G~S~-~~~~~~~~~ 86 (295)
..+..+.|...+|..++|..+-.+.+++.+||++||+++++..|.++++.|..+||.|+++|+||||+|. +......
T Consensus 7 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~g~Vvl~HG~~Eh~~ry~~la~~l~~~G~~V~~~D~RGhG~S~r~~rg~~~-- 84 (298)
T COG2267 7 RTRTEGYFTGADGTRLRYRTWAAPEPPKGVVVLVHGLGEHSGRYEELADDLAARGFDVYALDLRGHGRSPRGQRGHVD-- 84 (298)
T ss_pred cccccceeecCCCceEEEEeecCCCCCCcEEEEecCchHHHHHHHHHHHHHHhCCCEEEEecCCCCCCCCCCCcCCch--
Confidence 3456788999999999999987665555799999999999999999999999999999999999999998 4333221
Q ss_pred CCCHHHHHHHHHHHHHHhCC---CCceEEEEecccch-HHHHHHHHhCcCccceeEEEcCCCCCCCC--Cchhhhhhhcc
Q 022534 87 DFTENEFHEELDKLLDVLEV---KYPFFLVVQGFLVG-SYGLTWALKNPSRISKLAILNSPLTASSP--LPGLFQQLRIP 160 (295)
Q Consensus 87 ~~~~~~~~~~l~~~~~~l~~---~~~~~lv~~G~~~G-~~~~~~a~~~p~~v~~lil~~~p~~~~~~--~~~~~~~~~~~ 160 (295)
+.++|..|+..+++.+.. ..|++++ |||+| .+++.++.+++.+|+++||+ +|+..... ....+......
T Consensus 85 --~f~~~~~dl~~~~~~~~~~~~~~p~~l~--gHSmGg~Ia~~~~~~~~~~i~~~vLs-sP~~~l~~~~~~~~~~~~~~~ 159 (298)
T COG2267 85 --SFADYVDDLDAFVETIAEPDPGLPVFLL--GHSMGGLIALLYLARYPPRIDGLVLS-SPALGLGGAILRLILARLALK 159 (298)
T ss_pred --hHHHHHHHHHHHHHHHhccCCCCCeEEE--EeCcHHHHHHHHHHhCCccccEEEEE-CccccCChhHHHHHHHHHhcc
Confidence 357899999999998753 4678888 66665 57888999999999999887 56654431 11111111111
Q ss_pred cchhhhhhhHHHHHHHHHhCCCccccccc--ccccc-ccccccCCchhHHHHHHHhcchhhhhHhhhcCcCCCCCCCcEE
Q 022534 161 LLGEFTAQNAIMAERFIEAGSPYVLKLDK--ADVYR-LPYLASSGPGFALLEAARKVNFKDISSRIGAGFSSGSWDKPVL 237 (295)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l 237 (295)
.+.+......... ...........+.+. .+.+. -|......+...+........ + .........+++|+|
T Consensus 160 ~~~~~~p~~~~~~-~~~~~~~~~~~sr~~~~~~~~~~dP~~~~~~~~~~w~~~~~~a~-~-----~~~~~~~~~~~~PvL 232 (298)
T COG2267 160 LLGRIRPKLPVDS-NLLEGVLTDDLSRDPAEVAAYEADPLIGVGGPVSRWVDLALLAG-R-----VPALRDAPAIALPVL 232 (298)
T ss_pred cccccccccccCc-ccccCcCcchhhcCHHHHHHHhcCCccccCCccHHHHHHHHHhh-c-----ccchhccccccCCEE
Confidence 1110000000000 000000000000000 00000 011111111122222211111 0 000011236789999
Q ss_pred EEEeCCCCCCC-cchHHHHHhcCCC-CeEEEEecCCCCCCCCCC-h--HHHHHHHHHHHHhc
Q 022534 238 VAWGISDKYLP-QSVAEEFQKGNPN-VVKLQMIEGAGHMPQEDW-P--EKVVDGLRYFFLNY 294 (295)
Q Consensus 238 ~i~G~~D~~~~-~~~~~~~~~~~~~-~~~~~~i~~~gH~~~~e~-p--~~~~~~i~~fl~~~ 294 (295)
+++|++|.+++ .+...++.+..+. ++++++++|++|.++.|. . +++.+.+.+|+.+.
T Consensus 233 ll~g~~D~vv~~~~~~~~~~~~~~~~~~~~~~~~g~~He~~~E~~~~r~~~~~~~~~~l~~~ 294 (298)
T COG2267 233 LLQGGDDRVVDNVEGLARFFERAGSPDKELKVIPGAYHELLNEPDRAREEVLKDILAWLAEA 294 (298)
T ss_pred EEecCCCccccCcHHHHHHHHhcCCCCceEEecCCcchhhhcCcchHHHHHHHHHHHHHHhh
Confidence 99999999998 5666666554332 368999999999988774 5 89999999999763
|
|
| >TIGR01250 pro_imino_pep_2 proline-specific peptidases, Bacillus coagulans-type subfamily | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.9e-26 Score=198.32 Aligned_cols=267 Identities=20% Similarity=0.219 Sum_probs=154.5
Q ss_pred ceeeEEeCcEEEEEEEcCCCCCCCceEEEEcCCCCCCcc-chhhHHHhhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCCH
Q 022534 12 YGSYIKSGEYRWFVRETGSADSRLGTIVFLHGAPSHSYS-YRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTE 90 (295)
Q Consensus 12 ~~~~~~~~~~~~~~~~~g~~~~~~~~vv~lHG~~~~~~~-w~~~~~~l~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~ 90 (295)
+..+++.++.++.|+..++.. .+++|||+||+++++.. |..+.+.+.+.||+|+++|+||||.|+.+... ...++.
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~-~~~~vl~~hG~~g~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~--~~~~~~ 79 (288)
T TIGR01250 3 IEGIITVDGGYHLFTKTGGEG-EKIKLLLLHGGPGMSHEYLENLRELLKEEGREVIMYDQLGCGYSDQPDDS--DELWTI 79 (288)
T ss_pred ccceecCCCCeEEEEeccCCC-CCCeEEEEcCCCCccHHHHHHHHHHHHhcCCEEEEEcCCCCCCCCCCCcc--cccccH
Confidence 344577888888888877433 24799999998776655 45555556544899999999999999865321 112688
Q ss_pred HHHHHHHHHHHHHhCCCCceEEEEecccch-HHHHHHHHhCcCccceeEEEcCCCCCCCCCchhhhhhhcccch---hhh
Q 022534 91 NEFHEELDKLLDVLEVKYPFFLVVQGFLVG-SYGLTWALKNPSRISKLAILNSPLTASSPLPGLFQQLRIPLLG---EFT 166 (295)
Q Consensus 91 ~~~~~~l~~~~~~l~~~~~~~lv~~G~~~G-~~~~~~a~~~p~~v~~lil~~~p~~~~~~~~~~~~~~~~~~~~---~~~ 166 (295)
+++++++.+++++++.++ ++++ |||+| .+++.+|.++|++|++++++++..... ............+.. ...
T Consensus 80 ~~~~~~~~~~~~~~~~~~-~~li--G~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 155 (288)
T TIGR01250 80 DYFVDELEEVREKLGLDK-FYLL--GHSWGGMLAQEYALKYGQHLKGLIISSMLDSAP-EYVKELNRLRKELPPEVRAAI 155 (288)
T ss_pred HHHHHHHHHHHHHcCCCc-EEEE--EeehHHHHHHHHHHhCccccceeeEecccccch-HHHHHHHHHHhhcChhHHHHH
Confidence 999999999999998775 6676 67766 467888889999999999886432211 000000000000000 000
Q ss_pred h--------hhHH---HHHHHHHhCCCccccccccccccccccccCCchhHHHHHHHhc-chh--hhhHhhhcCcCCCCC
Q 022534 167 A--------QNAI---MAERFIEAGSPYVLKLDKADVYRLPYLASSGPGFALLEAARKV-NFK--DISSRIGAGFSSGSW 232 (295)
Q Consensus 167 ~--------~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~--~~~~~~~~~~~~~~~ 232 (295)
. .+.. ....+...... ........... ... . .....+..+... .+. .........-..+++
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~-~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i 230 (288)
T TIGR01250 156 KRCEASGDYDNPEYQEAVEVFYHHLLC--RTRKWPEALKH-LKS-G-MNTNVYNIMQGPNEFTITGNLKDWDITDKLSEI 230 (288)
T ss_pred HHHHhccCcchHHHHHHHHHHHHHhhc--ccccchHHHHH-Hhh-c-cCHHHHhcccCCccccccccccccCHHHHhhcc
Confidence 0 0000 00000000000 00000000000 000 0 000000000000 000 000000000011367
Q ss_pred CCcEEEEEeCCCCCCCcchHHHHHhcCCCCeEEEEecCCCCCCCCCChHHHHHHHHHHHH
Q 022534 233 DKPVLVAWGISDKYLPQSVAEEFQKGNPNVVKLQMIEGAGHMPQEDWPEKVVDGLRYFFL 292 (295)
Q Consensus 233 ~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~ 292 (295)
+||+++++|++|.+ +++....+.+.+++ +++++++++||++++|+|+++++.|.+|+.
T Consensus 231 ~~P~lii~G~~D~~-~~~~~~~~~~~~~~-~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~ 288 (288)
T TIGR01250 231 KVPTLLTVGEFDTM-TPEAAREMQELIAG-SRLVVFPDGSHMTMIEDPEVYFKLLSDFIR 288 (288)
T ss_pred CCCEEEEecCCCcc-CHHHHHHHHHhccC-CeEEEeCCCCCCcccCCHHHHHHHHHHHhC
Confidence 89999999999985 56778888888886 699999999999999999999999999984
|
This model describes a subfamily of the alpha/beta fold family of hydrolases. Characterized members include prolinases (Pro-Xaa dipeptidase, EC 3.4.13.8), prolyl aminopeptidases (EC 3.4.11.5), and a leucyl aminopeptidase |
| >PF12697 Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3LLC_A 3A2N_E 3A2M_A 3A2L_A 3AFI_F 3C5V_A 3C5W_P 3E0X_A 2ZJF_A 3QYJ_A | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.2e-27 Score=196.55 Aligned_cols=221 Identities=29% Similarity=0.420 Sum_probs=141.1
Q ss_pred EEEEcCCCCCCccchhhHHHhhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCceEEEEecc
Q 022534 38 IVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEELDKLLDVLEVKYPFFLVVQGF 117 (295)
Q Consensus 38 vv~lHG~~~~~~~w~~~~~~l~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~~lv~~G~ 117 (295)
|||+||+++++..|..+++.|+ +||+|+++|+||||.|+.+.. ...++.+++++++.+++++++.+ +++++ ||
T Consensus 1 vv~~hG~~~~~~~~~~~~~~l~-~~~~v~~~d~~G~G~s~~~~~---~~~~~~~~~~~~l~~~l~~~~~~-~~~lv--G~ 73 (228)
T PF12697_consen 1 VVFLHGFGGSSESWDPLAEALA-RGYRVIAFDLPGHGRSDPPPD---YSPYSIEDYAEDLAELLDALGIK-KVILV--GH 73 (228)
T ss_dssp EEEE-STTTTGGGGHHHHHHHH-TTSEEEEEECTTSTTSSSHSS---GSGGSHHHHHHHHHHHHHHTTTS-SEEEE--EE
T ss_pred eEEECCCCCCHHHHHHHHHHHh-CCCEEEEEecCCccccccccc---cCCcchhhhhhhhhhcccccccc-ccccc--cc
Confidence 7999999999999999999996 699999999999999997542 12457899999999999999886 47777 66
Q ss_pred cch-HHHHHHHHhCcCccceeEEEcCCCCCCCCCchhhhhhhcccchhhhhh-----hHHHHHHHHHhCCCccccccccc
Q 022534 118 LVG-SYGLTWALKNPSRISKLAILNSPLTASSPLPGLFQQLRIPLLGEFTAQ-----NAIMAERFIEAGSPYVLKLDKAD 191 (295)
Q Consensus 118 ~~G-~~~~~~a~~~p~~v~~lil~~~p~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~ 191 (295)
|+| .+++.++.++|++|+++++++++......... ....+++...... .......+... ........
T Consensus 74 S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~ 146 (228)
T PF12697_consen 74 SMGGMIALRLAARYPDRVKGLVLLSPPPPLPDSPSR---SFGPSFIRRLLAWRSRSLRRLASRFFYRW----FDGDEPED 146 (228)
T ss_dssp THHHHHHHHHHHHSGGGEEEEEEESESSSHHHHHCH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HTHHHHHH
T ss_pred ccccccccccccccccccccceeecccccccccccc---cccchhhhhhhhccccccccccccccccc----cccccccc
Confidence 665 56888889999999999999754431100000 0000000000000 00000000000 00000000
Q ss_pred cccccccccCCchhHHHHHHHh-cchhhhhHhhhcCcCCCCCCCcEEEEEeCCCCCCCcchHHHHHhcCCCCeEEEEecC
Q 022534 192 VYRLPYLASSGPGFALLEAARK-VNFKDISSRIGAGFSSGSWDKPVLVAWGISDKYLPQSVAEEFQKGNPNVVKLQMIEG 270 (295)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~ 270 (295)
..+. ....+...... ....+....+ +.+++|+++++|++|.+++.+..+++.+..++ ++++++++
T Consensus 147 ~~~~-------~~~~~~~~~~~~~~~~~~~~~~------~~~~~pvl~i~g~~D~~~~~~~~~~~~~~~~~-~~~~~~~~ 212 (228)
T PF12697_consen 147 LIRS-------SRRALAEYLRSNLWQADLSEAL------PRIKVPVLVIHGEDDPIVPPESAEELADKLPN-AELVVIPG 212 (228)
T ss_dssp HHHH-------HHHHHHHHHHHHHHHHHHHHHH------HGSSSEEEEEEETTSSSSHHHHHHHHHHHSTT-EEEEEETT
T ss_pred cccc-------cccccccccccccccccccccc------cccCCCeEEeecCCCCCCCHHHHHHHHHHCCC-CEEEEECC
Confidence 0000 00011111110 0001111122 25689999999999999998888999888886 89999999
Q ss_pred CCCCCCCCChHHHHHH
Q 022534 271 AGHMPQEDWPEKVVDG 286 (295)
Q Consensus 271 ~gH~~~~e~p~~~~~~ 286 (295)
+||++++|+|++|+++
T Consensus 213 ~gH~~~~~~p~~~~~a 228 (228)
T PF12697_consen 213 AGHFLFLEQPDEVAEA 228 (228)
T ss_dssp SSSTHHHHSHHHHHHH
T ss_pred CCCccHHHCHHHHhcC
Confidence 9999999999999874
|
... |
| >PLN02652 hydrolase; alpha/beta fold family protein | Back alignment and domain information |
|---|
Probab=99.95 E-value=5.4e-26 Score=204.21 Aligned_cols=256 Identities=20% Similarity=0.307 Sum_probs=155.3
Q ss_pred eEEeCcEEEEEEEcCCC-CCCCceEEEEcCCCCCCccchhhHHHhhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCCHHHH
Q 022534 15 YIKSGEYRWFVRETGSA-DSRLGTIVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEF 93 (295)
Q Consensus 15 ~~~~~~~~~~~~~~g~~-~~~~~~vv~lHG~~~~~~~w~~~~~~l~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~ 93 (295)
|...++..+++..+.+. .+.+++|||+||++++...|..+++.|++.||+|+++|+||||+|++.. .+.++.+.+
T Consensus 115 ~~~~~~~~l~~~~~~p~~~~~~~~Vl~lHG~~~~~~~~~~~a~~L~~~Gy~V~~~D~rGhG~S~~~~----~~~~~~~~~ 190 (395)
T PLN02652 115 FYGARRNALFCRSWAPAAGEMRGILIIIHGLNEHSGRYLHFAKQLTSCGFGVYAMDWIGHGGSDGLH----GYVPSLDYV 190 (395)
T ss_pred EECCCCCEEEEEEecCCCCCCceEEEEECCchHHHHHHHHHHHHHHHCCCEEEEeCCCCCCCCCCCC----CCCcCHHHH
Confidence 33445678888888763 3446799999999999999999999998889999999999999998753 223467888
Q ss_pred HHHHHHHHHHhCCC---CceEEEEecccchHH-HHHHHHhCcC---ccceeEEEcCCCCCCCCCchhhhhhhcccchhhh
Q 022534 94 HEELDKLLDVLEVK---YPFFLVVQGFLVGSY-GLTWALKNPS---RISKLAILNSPLTASSPLPGLFQQLRIPLLGEFT 166 (295)
Q Consensus 94 ~~~l~~~~~~l~~~---~~~~lv~~G~~~G~~-~~~~a~~~p~---~v~~lil~~~p~~~~~~~~~~~~~~~~~~~~~~~ 166 (295)
.+|+.++++.+..+ .+++++ |||+|++ ++. ++.+|+ +++++|+.+ |............. ..++...
T Consensus 191 ~~Dl~~~l~~l~~~~~~~~i~lv--GhSmGG~ial~-~a~~p~~~~~v~glVL~s-P~l~~~~~~~~~~~-~~~l~~~-- 263 (395)
T PLN02652 191 VEDTEAFLEKIRSENPGVPCFLF--GHSTGGAVVLK-AASYPSIEDKLEGIVLTS-PALRVKPAHPIVGA-VAPIFSL-- 263 (395)
T ss_pred HHHHHHHHHHHHHhCCCCCEEEE--EECHHHHHHHH-HHhccCcccccceEEEEC-cccccccchHHHHH-HHHHHHH--
Confidence 99999999987532 256676 7777754 444 445664 899998874 54322111111000 0000000
Q ss_pred hhhHHHHHHH-HHhCCCc--ccccccccc---ccccccccCCchhHHHHHHHhcchhhhhHhhhcCcCCCCCCCcEEEEE
Q 022534 167 AQNAIMAERF-IEAGSPY--VLKLDKADV---YRLPYLASSGPGFALLEAARKVNFKDISSRIGAGFSSGSWDKPVLVAW 240 (295)
Q Consensus 167 ~~~~~~~~~~-~~~~~~~--~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~ 240 (295)
....+ +.....+ ......... +.-+................ .....+... ..++++|+|+++
T Consensus 264 -----~~p~~~~~~~~~~~~~~s~~~~~~~~~~~dp~~~~g~i~~~~~~~~~-----~~~~~l~~~--L~~I~vPvLIi~ 331 (395)
T PLN02652 264 -----VAPRFQFKGANKRGIPVSRDPAALLAKYSDPLVYTGPIRVRTGHEIL-----RISSYLTRN--FKSVTVPFMVLH 331 (395)
T ss_pred -----hCCCCcccCcccccCCcCCCHHHHHHHhcCCCcccCCchHHHHHHHH-----HHHHHHHhh--cccCCCCEEEEE
Confidence 00000 0000000 000000000 00000000000000000000 000111111 237899999999
Q ss_pred eCCCCCCCcchHHHHHhcCCC-CeEEEEecCCCCCCCCC-ChHHHHHHHHHHHHh
Q 022534 241 GISDKYLPQSVAEEFQKGNPN-VVKLQMIEGAGHMPQED-WPEKVVDGLRYFFLN 293 (295)
Q Consensus 241 G~~D~~~~~~~~~~~~~~~~~-~~~~~~i~~~gH~~~~e-~p~~~~~~i~~fl~~ 293 (295)
|++|.+++++.+.++++..+. +++++++|+++|.++.| +|+++++.|.+||.+
T Consensus 332 G~~D~vvp~~~a~~l~~~~~~~~k~l~~~~ga~H~l~~e~~~e~v~~~I~~FL~~ 386 (395)
T PLN02652 332 GTADRVTDPLASQDLYNEAASRHKDIKLYDGFLHDLLFEPEREEVGRDIIDWMEK 386 (395)
T ss_pred eCCCCCCCHHHHHHHHHhcCCCCceEEEECCCeEEeccCCCHHHHHHHHHHHHHH
Confidence 999999999999988776543 46899999999998766 799999999999976
|
|
| >KOG1455 consensus Lysophospholipase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.94 E-value=6.2e-26 Score=188.89 Aligned_cols=264 Identities=18% Similarity=0.256 Sum_probs=166.1
Q ss_pred ccceeeEEeCcEEEEEEEcCCCC--CCCceEEEEcCCCCCC-ccchhhHHHhhhCCCeEEEeCCCCCCCCCCCCCCCCCC
Q 022534 10 REYGSYIKSGEYRWFVRETGSAD--SRLGTIVFLHGAPSHS-YSYRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDF 86 (295)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~g~~~--~~~~~vv~lHG~~~~~-~~w~~~~~~l~~~~~~via~Dl~G~G~S~~~~~~~~~~ 86 (295)
.....+.+.+|..++.+.+-+.. .++..|+++||+++++ +.|..++..|+..||.|+++|++|||+|++......
T Consensus 27 ~~~~~~~n~rG~~lft~~W~p~~~~~pr~lv~~~HG~g~~~s~~~~~~a~~l~~~g~~v~a~D~~GhG~SdGl~~yi~-- 104 (313)
T KOG1455|consen 27 YSESFFTNPRGAKLFTQSWLPLSGTEPRGLVFLCHGYGEHSSWRYQSTAKRLAKSGFAVYAIDYEGHGRSDGLHAYVP-- 104 (313)
T ss_pred eeeeeEEcCCCCEeEEEecccCCCCCCceEEEEEcCCcccchhhHHHHHHHHHhCCCeEEEeeccCCCcCCCCcccCC--
Confidence 34456667789999999986522 4567899999998865 788899999999999999999999999997654322
Q ss_pred CCCHHHHHHHHHHHHHHh-----CCCCceEEEEecccc-hHHHHHHHHhCcCccceeEEEcCCCCCCC-CC-chhhhhhh
Q 022534 87 DFTENEFHEELDKLLDVL-----EVKYPFFLVVQGFLV-GSYGLTWALKNPSRISKLAILNSPLTASS-PL-PGLFQQLR 158 (295)
Q Consensus 87 ~~~~~~~~~~l~~~~~~l-----~~~~~~~lv~~G~~~-G~~~~~~a~~~p~~v~~lil~~~p~~~~~-~~-~~~~~~~~ 158 (295)
+.+..++|+..+.+.+ +-+.|.+|. |+|| |++++.++.+.|+..+++|++ +|+.... .. |.......
T Consensus 105 --~~d~~v~D~~~~~~~i~~~~e~~~lp~FL~--GeSMGGAV~Ll~~~k~p~~w~G~ilv-aPmc~i~~~~kp~p~v~~~ 179 (313)
T KOG1455|consen 105 --SFDLVVDDVISFFDSIKEREENKGLPRFLF--GESMGGAVALLIALKDPNFWDGAILV-APMCKISEDTKPHPPVISI 179 (313)
T ss_pred --cHHHHHHHHHHHHHHHhhccccCCCCeeee--ecCcchHHHHHHHhhCCcccccceee-ecccccCCccCCCcHHHHH
Confidence 4567788888887753 224577887 6766 578888889999999999987 5654321 11 11000000
Q ss_pred cccchhhhhhhHHHHHHHHHhCCCccccc-----cccccc-cccccccCCchhH-HHHHHHhcchhhhhHhhhcCcCCCC
Q 022534 159 IPLLGEFTAQNAIMAERFIEAGSPYVLKL-----DKADVY-RLPYLASSGPGFA-LLEAARKVNFKDISSRIGAGFSSGS 231 (295)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (295)
.+++..+. .+|.-.-.+-.... ..+... .-|+.....+... .++-++. ...+..+ .++
T Consensus 180 l~~l~~li-------P~wk~vp~~d~~~~~~kdp~~r~~~~~npl~y~g~pRl~T~~ElLr~------~~~le~~--l~~ 244 (313)
T KOG1455|consen 180 LTLLSKLI-------PTWKIVPTKDIIDVAFKDPEKRKILRSDPLCYTGKPRLKTAYELLRV------TADLEKN--LNE 244 (313)
T ss_pred HHHHHHhC-------CceeecCCccccccccCCHHHHHHhhcCCceecCCccHHHHHHHHHH------HHHHHHh--ccc
Confidence 01111000 00100000000000 000000 0111111222211 1111111 1111111 237
Q ss_pred CCCcEEEEEeCCCCCCCcchHHHHHhcCC-CCeEEEEecCCCCCCCC----CChHHHHHHHHHHHHhcC
Q 022534 232 WDKPVLVAWGISDKYLPQSVAEEFQKGNP-NVVKLQMIEGAGHMPQE----DWPEKVVDGLRYFFLNYT 295 (295)
Q Consensus 232 ~~~P~l~i~G~~D~~~~~~~~~~~~~~~~-~~~~~~~i~~~gH~~~~----e~p~~~~~~i~~fl~~~~ 295 (295)
+++|.+++||+.|.+++++.++.+++..+ .+++++++||..|..+. |+-+.+...|.+||.+++
T Consensus 245 vtvPflilHG~dD~VTDp~~Sk~Lye~A~S~DKTlKlYpGm~H~Ll~gE~~en~e~Vf~DI~~Wl~~r~ 313 (313)
T KOG1455|consen 245 VTVPFLILHGTDDKVTDPKVSKELYEKASSSDKTLKLYPGMWHSLLSGEPDENVEIVFGDIISWLDERV 313 (313)
T ss_pred ccccEEEEecCCCcccCcHHHHHHHHhccCCCCceeccccHHHHhhcCCCchhHHHHHHHHHHHHHhcC
Confidence 79999999999999999999999987644 47899999999998763 456789999999998753
|
|
| >PRK14875 acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.94 E-value=3e-25 Score=199.16 Aligned_cols=255 Identities=23% Similarity=0.317 Sum_probs=157.1
Q ss_pred ccceeeEEeCcEEEEEEEcCCCCCCCceEEEEcCCCCCCccchhhHHHhhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCC
Q 022534 10 REYGSYIKSGEYRWFVRETGSADSRLGTIVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFT 89 (295)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~vv~lHG~~~~~~~w~~~~~~l~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~ 89 (295)
...+..+..++..++|...|+++ .++|||+||++++...|..+++.|.+ +|+|+++|+||||.|+.... .++
T Consensus 108 ~~~~~~~~~~~~~i~~~~~g~~~--~~~vl~~HG~~~~~~~~~~~~~~l~~-~~~v~~~d~~g~G~s~~~~~-----~~~ 179 (371)
T PRK14875 108 GPAPRKARIGGRTVRYLRLGEGD--GTPVVLIHGFGGDLNNWLFNHAALAA-GRPVIALDLPGHGASSKAVG-----AGS 179 (371)
T ss_pred cCCCCcceEcCcEEEEecccCCC--CCeEEEECCCCCccchHHHHHHHHhc-CCEEEEEcCCCCCCCCCCCC-----CCC
Confidence 44556777888889988877543 46999999999999999999999986 69999999999999975322 236
Q ss_pred HHHHHHHHHHHHHHhCCCCceEEEEecccch-HHHHHHHHhCcCccceeEEEcCCCCCCCCCchhhhhhhcccchhhhhh
Q 022534 90 ENEFHEELDKLLDVLEVKYPFFLVVQGFLVG-SYGLTWALKNPSRISKLAILNSPLTASSPLPGLFQQLRIPLLGEFTAQ 168 (295)
Q Consensus 90 ~~~~~~~l~~~~~~l~~~~~~~lv~~G~~~G-~~~~~~a~~~p~~v~~lil~~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (295)
.+++++++.++++.++.++ ++++ |||+| .+++.+|.++|++++++++++++.............+.... ... ..
T Consensus 180 ~~~~~~~~~~~~~~~~~~~-~~lv--G~S~Gg~~a~~~a~~~~~~v~~lv~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~ 254 (371)
T PRK14875 180 LDELAAAVLAFLDALGIER-AHLV--GHSMGGAVALRLAARAPQRVASLTLIAPAGLGPEINGDYIDGFVAAE-SRR-EL 254 (371)
T ss_pred HHHHHHHHHHHHHhcCCcc-EEEE--eechHHHHHHHHHHhCchheeEEEEECcCCcCcccchhHHHHhhccc-chh-HH
Confidence 7899999999999998764 6666 67766 46777888999999999988654322111111000000000 000 00
Q ss_pred hHHHHHHHHHhCCCccccccc-cccccccccccCCchhHHHHHHHhcch------hhhhHhhhcCcCCCCCCCcEEEEEe
Q 022534 169 NAIMAERFIEAGSPYVLKLDK-ADVYRLPYLASSGPGFALLEAARKVNF------KDISSRIGAGFSSGSWDKPVLVAWG 241 (295)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~P~l~i~G 241 (295)
...+ .... ..+....... ..... +....... ..........+ .+.... ..+++||+|+++|
T Consensus 255 ~~~~-~~~~--~~~~~~~~~~~~~~~~--~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~------l~~i~~Pvlii~g 322 (371)
T PRK14875 255 KPVL-ELLF--ADPALVTRQMVEDLLK--YKRLDGVD-DALRALADALFAGGRQRVDLRDR------LASLAIPVLVIWG 322 (371)
T ss_pred HHHH-HHHh--cChhhCCHHHHHHHHH--HhccccHH-HHHHHHHHHhccCcccchhHHHH------HhcCCCCEEEEEE
Confidence 0000 0000 0000000000 00000 00000000 00000000000 011111 1257899999999
Q ss_pred CCCCCCCcchHHHHHhcCCCCeEEEEecCCCCCCCCCChHHHHHHHHHHHHh
Q 022534 242 ISDKYLPQSVAEEFQKGNPNVVKLQMIEGAGHMPQEDWPEKVVDGLRYFFLN 293 (295)
Q Consensus 242 ~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 293 (295)
++|.++++..++.+ ...+++.+++++||++++|+|+++++.|..|+.+
T Consensus 323 ~~D~~vp~~~~~~l----~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~ 370 (371)
T PRK14875 323 EQDRIIPAAHAQGL----PDGVAVHVLPGAGHMPQMEAAADVNRLLAEFLGK 370 (371)
T ss_pred CCCCccCHHHHhhc----cCCCeEEEeCCCCCChhhhCHHHHHHHHHHHhcc
Confidence 99999987655433 2347999999999999999999999999999864
|
|
| >TIGR03695 menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase | Back alignment and domain information |
|---|
Probab=99.94 E-value=5.1e-25 Score=184.97 Aligned_cols=240 Identities=25% Similarity=0.379 Sum_probs=143.0
Q ss_pred ceEEEEcCCCCCCccchhhHHHhhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCCHHHHHHH-HHHHHHHhCCCCceEEEE
Q 022534 36 GTIVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEE-LDKLLDVLEVKYPFFLVV 114 (295)
Q Consensus 36 ~~vv~lHG~~~~~~~w~~~~~~l~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~-l~~~~~~l~~~~~~~lv~ 114 (295)
|+|||+||++++...|..+++.|+ .+|+|+++|+||||.|+.+... ..++.++++++ +..+++.++.+ +++++
T Consensus 2 ~~vv~~hG~~~~~~~~~~~~~~L~-~~~~v~~~d~~g~G~s~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~-~~~l~- 75 (251)
T TIGR03695 2 PVLVFLHGFLGSGADWQALIELLG-PHFRCLAIDLPGHGSSQSPDEI---ERYDFEEAAQDILATLLDQLGIE-PFFLV- 75 (251)
T ss_pred CEEEEEcCCCCchhhHHHHHHHhc-ccCeEEEEcCCCCCCCCCCCcc---ChhhHHHHHHHHHHHHHHHcCCC-eEEEE-
Confidence 689999999999999999999998 5899999999999999875321 24467788888 78888888765 46666
Q ss_pred ecccch-HHHHHHHHhCcCccceeEEEcCCCCCCCCCchhhhhhhcc-cchhhhhh-hHHHHHHHHHhC-CCc--ccccc
Q 022534 115 QGFLVG-SYGLTWALKNPSRISKLAILNSPLTASSPLPGLFQQLRIP-LLGEFTAQ-NAIMAERFIEAG-SPY--VLKLD 188 (295)
Q Consensus 115 ~G~~~G-~~~~~~a~~~p~~v~~lil~~~p~~~~~~~~~~~~~~~~~-~~~~~~~~-~~~~~~~~~~~~-~~~--~~~~~ 188 (295)
|||+| .+++.+|.++|++|++++++++.................. +...+... .......+.... ... .+...
T Consensus 76 -G~S~Gg~ia~~~a~~~~~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (251)
T TIGR03695 76 -GYSMGGRIALYYALQYPERVQGLILESGSPGLATEEERAARRQNDEQLAQRFEQEGLEAFLDDWYQQPLFASQKNLPPE 154 (251)
T ss_pred -EeccHHHHHHHHHHhCchheeeeEEecCCCCcCchHhhhhhhhcchhhhhHHHhcCccHHHHHHhcCceeeecccCChH
Confidence 67765 5788889999999999998864322111000000000000 00000000 000001111000 000 00000
Q ss_pred ccccccccccccCCchhHHHHHHHhcc---hhhhhHhhhcCcCCCCCCCcEEEEEeCCCCCCCcchHHHHHhcCCCCeEE
Q 022534 189 KADVYRLPYLASSGPGFALLEAARKVN---FKDISSRIGAGFSSGSWDKPVLVAWGISDKYLPQSVAEEFQKGNPNVVKL 265 (295)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~ 265 (295)
....+...... ..+ ..+........ ..+....+ ..+++|+++|+|++|..++ ...+.+.+..++ +++
T Consensus 155 ~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~------~~~~~P~l~i~g~~D~~~~-~~~~~~~~~~~~-~~~ 224 (251)
T TIGR03695 155 QRQALRAKRLA-NNP-EGLAKMLRATGLGKQPSLWPKL------QALTIPVLYLCGEKDEKFV-QIAKEMQKLLPN-LTL 224 (251)
T ss_pred HhHHHHHhccc-ccc-hHHHHHHHHhhhhcccchHHHh------hCCCCceEEEeeCcchHHH-HHHHHHHhcCCC-CcE
Confidence 00000000000 000 00111111000 00111111 2678999999999998763 566778888886 799
Q ss_pred EEecCCCCCCCCCChHHHHHHHHHHHH
Q 022534 266 QMIEGAGHMPQEDWPEKVVDGLRYFFL 292 (295)
Q Consensus 266 ~~i~~~gH~~~~e~p~~~~~~i~~fl~ 292 (295)
+++|++||++++|+|+++++.|..|+.
T Consensus 225 ~~~~~~gH~~~~e~~~~~~~~i~~~l~ 251 (251)
T TIGR03695 225 VIIANAGHNIHLENPEAFAKILLAFLE 251 (251)
T ss_pred EEEcCCCCCcCccChHHHHHHHHHHhC
Confidence 999999999999999999999999973
|
This protein catalyzes the formation of SHCHC, or (1 R,6 R)-2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate, by elmination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Note that SHCHC synthase activity previously was attributed to MenD, which in fact is SEPHCHC synthase. |
| >PRK05855 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.93 E-value=5e-25 Score=208.86 Aligned_cols=260 Identities=19% Similarity=0.269 Sum_probs=155.9
Q ss_pred eeeEEeCcEEEEEEEcCCCCCCCceEEEEcCCCCCCccchhhHHHhhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCCHHH
Q 022534 13 GSYIKSGEYRWFVRETGSADSRLGTIVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTENE 92 (295)
Q Consensus 13 ~~~~~~~~~~~~~~~~g~~~~~~~~vv~lHG~~~~~~~w~~~~~~l~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~ 92 (295)
..++..+|.+++|...|+++ +|+|||+||+++++..|..+++.|+ .+|+|+++|+||||+|+++... ..|+.++
T Consensus 5 ~~~~~~~g~~l~~~~~g~~~--~~~ivllHG~~~~~~~w~~~~~~L~-~~~~Vi~~D~~G~G~S~~~~~~---~~~~~~~ 78 (582)
T PRK05855 5 RTVVSSDGVRLAVYEWGDPD--RPTVVLVHGYPDNHEVWDGVAPLLA-DRFRVVAYDVRGAGRSSAPKRT---AAYTLAR 78 (582)
T ss_pred EEEEeeCCEEEEEEEcCCCC--CCeEEEEcCCCchHHHHHHHHHHhh-cceEEEEecCCCCCCCCCCCcc---cccCHHH
Confidence 45677899999999988643 4799999999999999999999996 5899999999999999975432 2568899
Q ss_pred HHHHHHHHHHHhCCCCceEEEEecccchHH-HHHHHHh--CcCccceeEEEcCCCCCCCCCchhhhhhhc-ccchh-hhh
Q 022534 93 FHEELDKLLDVLEVKYPFFLVVQGFLVGSY-GLTWALK--NPSRISKLAILNSPLTASSPLPGLFQQLRI-PLLGE-FTA 167 (295)
Q Consensus 93 ~~~~l~~~~~~l~~~~~~~lv~~G~~~G~~-~~~~a~~--~p~~v~~lil~~~p~~~~~~~~~~~~~~~~-~~~~~-~~~ 167 (295)
+++|+.+++++++.++|++|+ |||+|++ ++.++.. .|+++..++.+++|.... ...+..... ..... ...
T Consensus 79 ~a~dl~~~i~~l~~~~~~~lv--GhS~Gg~~a~~~a~~~~~~~~v~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~ 153 (582)
T PRK05855 79 LADDFAAVIDAVSPDRPVHLL--AHDWGSIQGWEAVTRPRAAGRIASFTSVSGPSLDH---VGFWLRSGLRRPTPRRLAR 153 (582)
T ss_pred HHHHHHHHHHHhCCCCcEEEE--ecChHHHHHHHHHhCccchhhhhhheeccCCchHH---HHHHHhhcccccchhhhhH
Confidence 999999999999887778787 7777764 4444443 345555555554432110 000000000 00000 000
Q ss_pred hhHHHHHHHHHh--CCCc---c-----cccccccccc----ccc---c-----ccCCchhHHHHHHHhcchhhhhHhhhc
Q 022534 168 QNAIMAERFIEA--GSPY---V-----LKLDKADVYR----LPY---L-----ASSGPGFALLEAARKVNFKDISSRIGA 225 (295)
Q Consensus 168 ~~~~~~~~~~~~--~~~~---~-----~~~~~~~~~~----~~~---~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (295)
........+... ..+. . .......... .+. . .....+.... ... .......
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~----~~~~~~~ 226 (582)
T PRK05855 154 ALGQLLRSWYIYLFHLPVLPELLWRLGLGRAWPRLLRRVEGTPVDPIPTQTTLSDGAHGVKLY---RAN----MIRSLSR 226 (582)
T ss_pred HHHHHhhhHHHHHHhCCCCcHHHhccchhhHHHHhhhhccCCCcchhhhhhhhccccchHHHH---Hhh----hhhhhcc
Confidence 000000000000 0000 0 0000000000 000 0 0000000000 000 0000000
Q ss_pred CcCCCCCCCcEEEEEeCCCCCCCcchHHHHHhcCCCCeEEEEecCCCCCCCCCChHHHHHHHHHHHHh
Q 022534 226 GFSSGSWDKPVLVAWGISDKYLPQSVAEEFQKGNPNVVKLQMIEGAGHMPQEDWPEKVVDGLRYFFLN 293 (295)
Q Consensus 226 ~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 293 (295)
-....+++|+|+|+|++|++++++....+++..++ .++++++ +||+++.|+|++++++|.+|+..
T Consensus 227 -~~~~~~~~P~lii~G~~D~~v~~~~~~~~~~~~~~-~~~~~~~-~gH~~~~e~p~~~~~~i~~fl~~ 291 (582)
T PRK05855 227 -PRERYTDVPVQLIVPTGDPYVRPALYDDLSRWVPR-LWRREIK-AGHWLPMSHPQVLAAAVAEFVDA 291 (582)
T ss_pred -CccCCccCceEEEEeCCCcccCHHHhccccccCCc-ceEEEcc-CCCcchhhChhHHHHHHHHHHHh
Confidence 01225789999999999999999888888888876 6888886 79999999999999999999975
|
|
| >PLN02980 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesium ion binding / thiamin pyrophosphate binding | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.6e-24 Score=223.30 Aligned_cols=261 Identities=17% Similarity=0.232 Sum_probs=156.4
Q ss_pred EEeCcE--EEEEEEcCCCCCCCceEEEEcCCCCCCccchhhHHHhhhCCCeEEEeCCCCCCCCCCCCCC---CCCCCCCH
Q 022534 16 IKSGEY--RWFVRETGSADSRLGTIVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKG---YDDFDFTE 90 (295)
Q Consensus 16 ~~~~~~--~~~~~~~g~~~~~~~~vv~lHG~~~~~~~w~~~~~~l~~~~~~via~Dl~G~G~S~~~~~~---~~~~~~~~ 90 (295)
++.++. -++|++.|+.+ .+++|||+||+++++..|..+++.|.+ +|+|+++|+||||.|+.+... .....|++
T Consensus 1351 v~~~~~~~~i~~~~~G~~~-~~~~vVllHG~~~s~~~w~~~~~~L~~-~~rVi~~Dl~G~G~S~~~~~~~~~~~~~~~si 1428 (1655)
T PLN02980 1351 VDVDGFSCLIKVHEVGQNA-EGSVVLFLHGFLGTGEDWIPIMKAISG-SARCISIDLPGHGGSKIQNHAKETQTEPTLSV 1428 (1655)
T ss_pred EccCceEEEEEEEecCCCC-CCCeEEEECCCCCCHHHHHHHHHHHhC-CCEEEEEcCCCCCCCCCccccccccccccCCH
Confidence 444443 35556666532 246999999999999999999999986 699999999999999864310 01235688
Q ss_pred HHHHHHHHHHHHHhCCCCceEEEEecccch-HHHHHHHHhCcCccceeEEEcCCCCCCCCCchhhhhhhcccc---hhhh
Q 022534 91 NEFHEELDKLLDVLEVKYPFFLVVQGFLVG-SYGLTWALKNPSRISKLAILNSPLTASSPLPGLFQQLRIPLL---GEFT 166 (295)
Q Consensus 91 ~~~~~~l~~~~~~l~~~~~~~lv~~G~~~G-~~~~~~a~~~p~~v~~lil~~~p~~~~~~~~~~~~~~~~~~~---~~~~ 166 (295)
+++++++.+++++++.++ ++++ |||+| .+++.+|.++|++|++++++++....... .....+.... ....
T Consensus 1429 ~~~a~~l~~ll~~l~~~~-v~Lv--GhSmGG~iAl~~A~~~P~~V~~lVlis~~p~~~~~---~~~~~~~~~~~~~~~~l 1502 (1655)
T PLN02980 1429 ELVADLLYKLIEHITPGK-VTLV--GYSMGARIALYMALRFSDKIEGAVIISGSPGLKDE---VARKIRSAKDDSRARML 1502 (1655)
T ss_pred HHHHHHHHHHHHHhCCCC-EEEE--EECHHHHHHHHHHHhChHhhCEEEEECCCCccCch---HHHHHHhhhhhHHHHHH
Confidence 999999999999998775 6676 77776 56888999999999999998643221110 0011100000 0000
Q ss_pred hh--hHHHHHHHHHhCC-Ccccc-ccccccccccccccCCchhHHHHHHHhcc---hhhhhHhhhcCcCCCCCCCcEEEE
Q 022534 167 AQ--NAIMAERFIEAGS-PYVLK-LDKADVYRLPYLASSGPGFALLEAARKVN---FKDISSRIGAGFSSGSWDKPVLVA 239 (295)
Q Consensus 167 ~~--~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~P~l~i 239 (295)
.. ...+...|..... ..... .......+.... .... ..+........ ..+.... ..++++|+|+|
T Consensus 1503 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~l~~~~~~~~~dl~~~------L~~I~~PtLlI 1574 (1655)
T PLN02980 1503 IDHGLEIFLENWYSGELWKSLRNHPHFNKIVASRLL-HKDV-PSLAKLLSDLSIGRQPSLWED------LKQCDTPLLLV 1574 (1655)
T ss_pred HhhhHHHHHHHhccHHHhhhhccCHHHHHHHHHHHh-cCCH-HHHHHHHHHhhhcccchHHHH------HhhCCCCEEEE
Confidence 00 0001111111000 00000 000000000000 0000 00000000000 0011111 13678999999
Q ss_pred EeCCCCCCCcchHHHHHhcCCCC-----------eEEEEecCCCCCCCCCChHHHHHHHHHHHHh
Q 022534 240 WGISDKYLPQSVAEEFQKGNPNV-----------VKLQMIEGAGHMPQEDWPEKVVDGLRYFFLN 293 (295)
Q Consensus 240 ~G~~D~~~~~~~~~~~~~~~~~~-----------~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 293 (295)
+|++|.+++ +.+.++.+.+++. ++++++|+|||++++|+|++|++.|++||.+
T Consensus 1575 ~Ge~D~~~~-~~a~~~~~~i~~a~~~~~~~~~~~a~lvvI~~aGH~~~lE~Pe~f~~~I~~FL~~ 1638 (1655)
T PLN02980 1575 VGEKDVKFK-QIAQKMYREIGKSKESGNDKGKEIIEIVEIPNCGHAVHLENPLPVIRALRKFLTR 1638 (1655)
T ss_pred EECCCCccH-HHHHHHHHHccccccccccccccceEEEEECCCCCchHHHCHHHHHHHHHHHHHh
Confidence 999999774 5667777776641 4899999999999999999999999999975
|
|
| >TIGR01249 pro_imino_pep_1 proline iminopeptidase, Neisseria-type subfamily | Back alignment and domain information |
|---|
Probab=99.93 E-value=9.3e-24 Score=184.84 Aligned_cols=122 Identities=20% Similarity=0.311 Sum_probs=93.7
Q ss_pred eeEEe-CcEEEEEEEcCCCCCCCceEEEEcCCCCCCccchhhHHHhhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCCHHH
Q 022534 14 SYIKS-GEYRWFVRETGSADSRLGTIVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTENE 92 (295)
Q Consensus 14 ~~~~~-~~~~~~~~~~g~~~~~~~~vv~lHG~~~~~~~w~~~~~~l~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~ 92 (295)
.+++. +|.+++|.+.|+++ .++|||+||++++...| .+...+...+|+|+++|+||||+|+.+... +.++.++
T Consensus 7 ~~~~~~~~~~l~y~~~g~~~--~~~lvllHG~~~~~~~~-~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~---~~~~~~~ 80 (306)
T TIGR01249 7 GYLNVSDNHQLYYEQSGNPD--GKPVVFLHGGPGSGTDP-GCRRFFDPETYRIVLFDQRGCGKSTPHACL---EENTTWD 80 (306)
T ss_pred CeEEcCCCcEEEEEECcCCC--CCEEEEECCCCCCCCCH-HHHhccCccCCEEEEECCCCCCCCCCCCCc---ccCCHHH
Confidence 44444 67999999988543 35899999998776554 444555445899999999999999865422 2457789
Q ss_pred HHHHHHHHHHHhCCCCceEEEEecccch-HHHHHHHHhCcCccceeEEEcCCC
Q 022534 93 FHEELDKLLDVLEVKYPFFLVVQGFLVG-SYGLTWALKNPSRISKLAILNSPL 144 (295)
Q Consensus 93 ~~~~l~~~~~~l~~~~~~~lv~~G~~~G-~~~~~~a~~~p~~v~~lil~~~p~ 144 (295)
+++++..+++++++++ ++++ |||+| .+++.++.++|++|+++|++++..
T Consensus 81 ~~~dl~~l~~~l~~~~-~~lv--G~S~GG~ia~~~a~~~p~~v~~lvl~~~~~ 130 (306)
T TIGR01249 81 LVADIEKLREKLGIKN-WLVF--GGSWGSTLALAYAQTHPEVVTGLVLRGIFL 130 (306)
T ss_pred HHHHHHHHHHHcCCCC-EEEE--EECHHHHHHHHHHHHChHhhhhheeecccc
Confidence 9999999999998875 5666 67765 578889999999999999986543
|
This model represents one of two related families of proline iminopeptidase in the alpha/beta fold hydrolase family. The fine specificities of the various members, including both the range of short peptides from which proline can be removed and whether other amino acids such as alanine can be also removed, may vary among members. |
| >TIGR01607 PST-A Plasmodium subtelomeric family (PST-A) | Back alignment and domain information |
|---|
Probab=99.93 E-value=2.9e-24 Score=189.76 Aligned_cols=258 Identities=17% Similarity=0.211 Sum_probs=152.1
Q ss_pred eEEeCcEEEEEEEcCCCCCCCceEEEEcCCCCCCcc----------------------c----hhhHHHhhhCCCeEEEe
Q 022534 15 YIKSGEYRWFVRETGSADSRLGTIVFLHGAPSHSYS----------------------Y----RNVMSQMSDAGFHCFAP 68 (295)
Q Consensus 15 ~~~~~~~~~~~~~~g~~~~~~~~vv~lHG~~~~~~~----------------------w----~~~~~~l~~~~~~via~ 68 (295)
|.+.+|..+++..+.+. +++++|+++||+++++.. | ..+++.|.++||+|+++
T Consensus 2 ~~~~~g~~l~~~~~~~~-~~kg~v~i~HG~~eh~~~~~~~~~~~~~~~~~~~~~~~~ry~~y~~~~~~~l~~~G~~V~~~ 80 (332)
T TIGR01607 2 FRNKDGLLLKTYSWIVK-NAIGIIVLIHGLKSHLRLQFLKINAKIVNNDRAVLIDTDNYYIYKDSWIENFNKNGYSVYGL 80 (332)
T ss_pred ccCCCCCeEEEeeeecc-CCeEEEEEECCCchhhhhhhhhcCcccCCCCeeEEEcCCcceEeeHHHHHHHHHCCCcEEEe
Confidence 44557888988887654 457899999999999861 1 46789998889999999
Q ss_pred CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCC-----------------------CCceEEEEecccchH-HHH
Q 022534 69 DWLGFGFSDKPEKGYDDFDFTENEFHEELDKLLDVLEV-----------------------KYPFFLVVQGFLVGS-YGL 124 (295)
Q Consensus 69 Dl~G~G~S~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~-----------------------~~~~~lv~~G~~~G~-~~~ 124 (295)
|+||||+|+...... .+-.+.+++++|+.++++.+.. +.|++++ |||+|+ +++
T Consensus 81 D~rGHG~S~~~~~~~-g~~~~~~~~v~Dl~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~--GhSmGg~i~~ 157 (332)
T TIGR01607 81 DLQGHGESDGLQNLR-GHINCFDDLVYDVIQYMNRINDSIILENETKSDDESYDIVNTKENRLPMYII--GLSMGGNIAL 157 (332)
T ss_pred cccccCCCccccccc-cchhhHHHHHHHHHHHHHHhhhhhccccccccccccccccccccCCCceeEe--eccCccHHHH
Confidence 999999998642211 1112568899999999887521 3567777 777765 667
Q ss_pred HHHHhCcC--------ccceeEEEcCCCCCCCCC-c--hhhhhhhcccchhhhhhhHHHHHHHHHhC----------CCc
Q 022534 125 TWALKNPS--------RISKLAILNSPLTASSPL-P--GLFQQLRIPLLGEFTAQNAIMAERFIEAG----------SPY 183 (295)
Q Consensus 125 ~~a~~~p~--------~v~~lil~~~p~~~~~~~-~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~ 183 (295)
.++.++++ .++++|++++++...... + ........+++.. ..++.+.. .+.
T Consensus 158 ~~~~~~~~~~~~~~~~~i~g~i~~s~~~~i~~~~~~~~~~~~~~~~~l~~~--------~~~~~p~~~~~~~~~~~~~~~ 229 (332)
T TIGR01607 158 RLLELLGKSNENNDKLNIKGCISLSGMISIKSVGSDDSFKFKYFYLPVMNF--------MSRVFPTFRISKKIRYEKSPY 229 (332)
T ss_pred HHHHHhccccccccccccceEEEeccceEEecccCCCcchhhhhHHHHHHH--------HHHHCCcccccCccccccChh
Confidence 77665542 588888775443211100 0 0000000001000 00111100 000
Q ss_pred cccccccccccccccccCCchhHHHHHHHhcchhhhhHhhhcCcCCCCCCCcEEEEEeCCCCCCCcchHHHHHhcCC-CC
Q 022534 184 VLKLDKADVYRLPYLASSGPGFALLEAARKVNFKDISSRIGAGFSSGSWDKPVLVAWGISDKYLPQSVAEEFQKGNP-NV 262 (295)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~~-~~ 262 (295)
.......+.+ .........+...+... ...+.........++|+|+|+|++|.+++++.+..+++... .+
T Consensus 230 ~~~~~~~Dp~----~~~~~~s~~~~~~l~~~-----~~~~~~~~~~i~~~~P~Lii~G~~D~vv~~~~~~~~~~~~~~~~ 300 (332)
T TIGR01607 230 VNDIIKFDKF----RYDGGITFNLASELIKA-----TDTLDCDIDYIPKDIPILFIHSKGDCVCSYEGTVSFYNKLSISN 300 (332)
T ss_pred hhhHHhcCcc----ccCCcccHHHHHHHHHH-----HHHHHhhHhhCCCCCCEEEEEeCCCCccCHHHHHHHHHhccCCC
Confidence 0000111111 11011111111111100 01111111101227999999999999999988888876543 24
Q ss_pred eEEEEecCCCCCCCCCC-hHHHHHHHHHHHHh
Q 022534 263 VKLQMIEGAGHMPQEDW-PEKVVDGLRYFFLN 293 (295)
Q Consensus 263 ~~~~~i~~~gH~~~~e~-p~~~~~~i~~fl~~ 293 (295)
++++++++++|.++.|. ++++.+.|.+||.+
T Consensus 301 ~~l~~~~g~~H~i~~E~~~~~v~~~i~~wL~~ 332 (332)
T TIGR01607 301 KELHTLEDMDHVITIEPGNEEVLKKIIEWISN 332 (332)
T ss_pred cEEEEECCCCCCCccCCCHHHHHHHHHHHhhC
Confidence 79999999999998885 79999999999864
|
These genes are preferentially located in the subtelomeric regions of the chromosomes of both P. falciparum and P. yoelii. |
| >PLN02511 hydrolase | Back alignment and domain information |
|---|
Probab=99.90 E-value=4.8e-23 Score=185.53 Aligned_cols=242 Identities=17% Similarity=0.186 Sum_probs=136.9
Q ss_pred CCceEEEEcCCCCCCcc-c-hhhHHHhhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCC---C
Q 022534 34 RLGTIVFLHGAPSHSYS-Y-RNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEELDKLLDVLEVK---Y 108 (295)
Q Consensus 34 ~~~~vv~lHG~~~~~~~-w-~~~~~~l~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~---~ 108 (295)
.+|+||++||+++++.. | ..++..+.+.||+|+++|+||||.|..+.+.. ....+++|+.++++.+... .
T Consensus 99 ~~p~vvllHG~~g~s~~~y~~~~~~~~~~~g~~vv~~d~rG~G~s~~~~~~~-----~~~~~~~Dl~~~i~~l~~~~~~~ 173 (388)
T PLN02511 99 DAPVLILLPGLTGGSDDSYVRHMLLRARSKGWRVVVFNSRGCADSPVTTPQF-----YSASFTGDLRQVVDHVAGRYPSA 173 (388)
T ss_pred CCCEEEEECCCCCCCCCHHHHHHHHHHHHCCCEEEEEecCCCCCCCCCCcCE-----EcCCchHHHHHHHHHHHHHCCCC
Confidence 35789999999877654 5 45666665679999999999999998643221 1245678888888887652 3
Q ss_pred ceEEEEecccch-HHHHHHHHhCcCc--cceeEEEcCCCCCCCCCchhhhhhhcccchhhhhhh--HHHH--HHHHHhCC
Q 022534 109 PFFLVVQGFLVG-SYGLTWALKNPSR--ISKLAILNSPLTASSPLPGLFQQLRIPLLGEFTAQN--AIMA--ERFIEAGS 181 (295)
Q Consensus 109 ~~~lv~~G~~~G-~~~~~~a~~~p~~--v~~lil~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~--~~~~~~~~ 181 (295)
+++++ |+|+| .+++.++.++|++ |++++++++|...... ...+............... .... ...+....
T Consensus 174 ~~~lv--G~SlGg~i~~~yl~~~~~~~~v~~~v~is~p~~l~~~-~~~~~~~~~~~y~~~~~~~l~~~~~~~~~~~~~~~ 250 (388)
T PLN02511 174 NLYAA--GWSLGANILVNYLGEEGENCPLSGAVSLCNPFDLVIA-DEDFHKGFNNVYDKALAKALRKIFAKHALLFEGLG 250 (388)
T ss_pred CEEEE--EechhHHHHHHHHHhcCCCCCceEEEEECCCcCHHHH-HHHHhccHHHHHHHHHHHHHHHHHHHHHHHHhhCC
Confidence 56776 77766 5778889999987 8888888776642100 0000000000000000000 0000 00000000
Q ss_pred CccccccccccccccccccCCchhHHHHHHHh--cchhhhh---HhhhcCcCCCCCCCcEEEEEeCCCCCCCcchH-HHH
Q 022534 182 PYVLKLDKADVYRLPYLASSGPGFALLEAARK--VNFKDIS---SRIGAGFSSGSWDKPVLVAWGISDKYLPQSVA-EEF 255 (295)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~---~~~~~~~~~~~~~~P~l~i~G~~D~~~~~~~~-~~~ 255 (295)
.. .... ...+ ...-..+.+.... ..+.... .+.......+++++|+|+|+|++|++++.+.. ...
T Consensus 251 ~~-~~~~--~~~~------~~~~~~fd~~~t~~~~gf~~~~~yy~~~s~~~~L~~I~vPtLiI~g~dDpi~p~~~~~~~~ 321 (388)
T PLN02511 251 GE-YNIP--LVAN------AKTVRDFDDGLTRVSFGFKSVDAYYSNSSSSDSIKHVRVPLLCIQAANDPIAPARGIPRED 321 (388)
T ss_pred Cc-cCHH--HHHh------CCCHHHHHHhhhhhcCCCCCHHHHHHHcCchhhhccCCCCeEEEEcCCCCcCCcccCcHhH
Confidence 00 0000 0000 0000000000000 0011000 00000011236899999999999999987654 445
Q ss_pred HhcCCCCeEEEEecCCCCCCCCCChHH------HHHHHHHHHHh
Q 022534 256 QKGNPNVVKLQMIEGAGHMPQEDWPEK------VVDGLRYFFLN 293 (295)
Q Consensus 256 ~~~~~~~~~~~~i~~~gH~~~~e~p~~------~~~~i~~fl~~ 293 (295)
.+..++ +++++++++||+.++|+|+. +.+.+.+||..
T Consensus 322 ~~~~p~-~~l~~~~~gGH~~~~E~p~~~~~~~w~~~~i~~Fl~~ 364 (388)
T PLN02511 322 IKANPN-CLLIVTPSGGHLGWVAGPEAPFGAPWTDPVVMEFLEA 364 (388)
T ss_pred HhcCCC-EEEEECCCcceeccccCCCCCCCCccHHHHHHHHHHH
Confidence 667786 79999999999999999987 48999999865
|
|
| >KOG2984 consensus Predicted hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.89 E-value=1.2e-22 Score=158.96 Aligned_cols=254 Identities=15% Similarity=0.165 Sum_probs=164.5
Q ss_pred ccccceeeEEeCcEEEEEEEcCCCCCCCceEEEEcCC-CCCCccchhhHHHhhhC-CCeEEEeCCCCCCCCCCCCCCCCC
Q 022534 8 KGREYGSYIKSGEYRWFVRETGSADSRLGTIVFLHGA-PSHSYSYRNVMSQMSDA-GFHCFAPDWLGFGFSDKPEKGYDD 85 (295)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~vv~lHG~-~~~~~~w~~~~~~l~~~-~~~via~Dl~G~G~S~~~~~~~~~ 85 (295)
.+.++..-+.+||..++|+++|.+++ -|+++-|. ++.+..|..++..|... -++++++|-||||.|..|+... .
T Consensus 18 ~~~~te~kv~vng~ql~y~~~G~G~~---~iLlipGalGs~~tDf~pql~~l~k~l~~TivawDPpGYG~SrPP~Rkf-~ 93 (277)
T KOG2984|consen 18 QSDYTESKVHVNGTQLGYCKYGHGPN---YILLIPGALGSYKTDFPPQLLSLFKPLQVTIVAWDPPGYGTSRPPERKF-E 93 (277)
T ss_pred cchhhhheeeecCceeeeeecCCCCc---eeEecccccccccccCCHHHHhcCCCCceEEEEECCCCCCCCCCCcccc-h
Confidence 34567778899999999999998765 68889996 56777899998887543 3899999999999999876533 2
Q ss_pred CCCCHHHHHHHHHHHHHHhCCCCceEEEEecccchHH-HHHHHHhCcCccceeEEEcCCCCCCCCCchhhhhhhcccchh
Q 022534 86 FDFTENEFHEELDKLLDVLEVKYPFFLVVQGFLVGSY-GLTWALKNPSRISKLAILNSPLTASSPLPGLFQQLRIPLLGE 164 (295)
Q Consensus 86 ~~~~~~~~~~~l~~~~~~l~~~~~~~lv~~G~~~G~~-~~~~a~~~p~~v~~lil~~~p~~~~~~~~~~~~~~~~~~~~~ 164 (295)
.++- ..=+++..+++++|..++ +.++ |||-|++ ++..|+++++.|.+++++++.......-.-.+.-++
T Consensus 94 ~~ff-~~Da~~avdLM~aLk~~~-fsvl--GWSdGgiTalivAak~~e~v~rmiiwga~ayvn~~~~ma~kgiR------ 163 (277)
T KOG2984|consen 94 VQFF-MKDAEYAVDLMEALKLEP-FSVL--GWSDGGITALIVAAKGKEKVNRMIIWGAAAYVNHLGAMAFKGIR------ 163 (277)
T ss_pred HHHH-HHhHHHHHHHHHHhCCCC-eeEe--eecCCCeEEEEeeccChhhhhhheeecccceecchhHHHHhchH------
Confidence 2211 122566778889998874 6665 9986654 567789999999999999764432211000000000
Q ss_pred hhhhhHHHHHHHHHhCCCccccccccccccccccccCCchhHHHHHHHhcchhhhhH-hhhcCcCCCCCCCcEEEEEeCC
Q 022534 165 FTAQNAIMAERFIEAGSPYVLKLDKADVYRLPYLASSGPGFALLEAARKVNFKDISS-RIGAGFSSGSWDKPVLVAWGIS 243 (295)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~P~l~i~G~~ 243 (295)
-...|.+.+.+-.. +.|...+... .=..+++.+.+. .+..+ ++ .+....+++||+|+++|++
T Consensus 164 -------dv~kWs~r~R~P~e-----~~Yg~e~f~~--~wa~wvD~v~qf--~~~~dG~f-Cr~~lp~vkcPtli~hG~k 226 (277)
T KOG2984|consen 164 -------DVNKWSARGRQPYE-----DHYGPETFRT--QWAAWVDVVDQF--HSFCDGRF-CRLVLPQVKCPTLIMHGGK 226 (277)
T ss_pred -------HHhhhhhhhcchHH-----HhcCHHHHHH--HHHHHHHHHHHH--hhcCCCch-HhhhcccccCCeeEeeCCc
Confidence 00112211100000 0000000000 000122221110 00000 00 1111347899999999999
Q ss_pred CCCCCcchHHHHHhcCCCCeEEEEecCCCCCCCCCChHHHHHHHHHHHHh
Q 022534 244 DKYLPQSVAEEFQKGNPNVVKLQMIEGAGHMPQEDWPEKVVDGLRYFFLN 293 (295)
Q Consensus 244 D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 293 (295)
|+.++...+-.+.++.+. +++.+.|..+|..++-.+++|+..+.+||..
T Consensus 227 Dp~~~~~hv~fi~~~~~~-a~~~~~peGkHn~hLrya~eFnklv~dFl~~ 275 (277)
T KOG2984|consen 227 DPFCGDPHVCFIPVLKSL-AKVEIHPEGKHNFHLRYAKEFNKLVLDFLKS 275 (277)
T ss_pred CCCCCCCCccchhhhccc-ceEEEccCCCcceeeechHHHHHHHHHHHhc
Confidence 999988888888888886 7999999999999999999999999999964
|
|
| >PRK06765 homoserine O-acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.88 E-value=2.7e-21 Score=173.22 Aligned_cols=266 Identities=14% Similarity=0.134 Sum_probs=155.4
Q ss_pred cEEEEEEEcCCCC-CCCceEEEEcCCCCCC-------------ccchhhHHH---hhhCCCeEEEeCCCCCCCCCCC---
Q 022534 20 EYRWFVRETGSAD-SRLGTIVFLHGAPSHS-------------YSYRNVMSQ---MSDAGFHCFAPDWLGFGFSDKP--- 79 (295)
Q Consensus 20 ~~~~~~~~~g~~~-~~~~~vv~lHG~~~~~-------------~~w~~~~~~---l~~~~~~via~Dl~G~G~S~~~--- 79 (295)
..++.|+.+|..+ ...++||+.|++++++ ..|..++-. |....|-||++|..|-|.|+.|
T Consensus 40 ~~~~~Y~t~G~ln~~~~n~vlv~h~~tg~~h~~~~~~~~~~~~gww~~~iG~g~~lDt~~yfvi~~n~lG~~~~~~p~~g 119 (389)
T PRK06765 40 DVQMGYETYGTLNRAKSNVILITHYFSATSHAAGKYTADDEESGYWDGLIGPGKAIDTNKYFVISTDTLCNVQVKDPNVI 119 (389)
T ss_pred CceEEEEeccccCCCCCCEEEEeCCCCCchhhcccccccCCCcccHHhccCCCCCcCCCceEEEEecccCCCcCCCCCCC
Confidence 4889999999633 2246899999998754 237666643 5455799999999998864322
Q ss_pred ----C---C--C--C--CCCCCCHHHHHHHHHHHHHHhCCCCceEEEEecccch-HHHHHHHHhCcCccceeEEEcCCCC
Q 022534 80 ----E---K--G--Y--DDFDFTENEFHEELDKLLDVLEVKYPFFLVVQGFLVG-SYGLTWALKNPSRISKLAILNSPLT 145 (295)
Q Consensus 80 ----~---~--~--~--~~~~~~~~~~~~~l~~~~~~l~~~~~~~lv~~G~~~G-~~~~~~a~~~p~~v~~lil~~~p~~ 145 (295)
. + + + +-..|+++++++++..+++++++++...++ |||+| +.++.+|.++|++|+++|++++...
T Consensus 120 ~tgp~s~~p~tg~~~~~~fP~~t~~d~~~~~~~ll~~lgi~~~~~vv--G~SmGG~ial~~a~~~P~~v~~lv~ia~~~~ 197 (389)
T PRK06765 120 TTGPASINPKTGKPYGMDFPVVTILDFVRVQKELIKSLGIARLHAVM--GPSMGGMQAQEWAVHYPHMVERMIGVIGNPQ 197 (389)
T ss_pred CCCCCCCCcCCCCccCCCCCcCcHHHHHHHHHHHHHHcCCCCceEEE--EECHHHHHHHHHHHHChHhhheEEEEecCCC
Confidence 1 0 0 0 012478999999999999999998754355 66765 5789999999999999999866443
Q ss_pred CCCCC-chhhhhhhcccc-------hhhh----hhhHHH-----------HHHHHHhCCCccccccccc-----------
Q 022534 146 ASSPL-PGLFQQLRIPLL-------GEFT----AQNAIM-----------AERFIEAGSPYVLKLDKAD----------- 191 (295)
Q Consensus 146 ~~~~~-~~~~~~~~~~~~-------~~~~----~~~~~~-----------~~~~~~~~~~~~~~~~~~~----------- 191 (295)
..... .......+..+. +.+. ...... ...++..............
T Consensus 198 ~~~~~~~~~~~~~~~ai~~dp~~~~G~y~~~~~p~~Gl~~a~~~~~~~~~s~~~~~~~f~r~~~~~~~~~~~~~~~~~~e 277 (389)
T PRK06765 198 NDAWTSVNVLQNWAEAIRLDPNWKGGKYYGEEQPMKGLTLALRMMTMNAFDEHFYETTFPRNASIEVDPYEKVSTLTSFE 277 (389)
T ss_pred CChhHHHHHHHHHHHHHHhCCCCCCCCCCCCCCchHHHHHHHHHHHHHcCCHHHHHHHcCcCccccccccccccchhhHH
Confidence 22111 111110000000 0000 000000 0111110000000000000
Q ss_pred cc-cc---cccccCCch-hH-HHHHHHhcchh----hhhHhhhcCcCCCCCCCcEEEEEeCCCCCCCcchHHHHHhcCCC
Q 022534 192 VY-RL---PYLASSGPG-FA-LLEAARKVNFK----DISSRIGAGFSSGSWDKPVLVAWGISDKYLPQSVAEEFQKGNPN 261 (295)
Q Consensus 192 ~~-~~---~~~~~~~~~-~~-~~~~~~~~~~~----~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~ 261 (295)
.+ .. .+....++. +. +.......+.. +.... ..++++|+|+|+|++|.++|++.++++.+.+++
T Consensus 278 ~yl~~~~~~~~~~~Dan~~l~l~~a~~~~d~g~~~~dl~~~------L~~I~~PtLvI~G~~D~l~p~~~~~~la~~lp~ 351 (389)
T PRK06765 278 KEINKATYRRAELVDANHWLYLAKAVQLFDAGHGFSSLEEA------LSNIEANVLMIPCKQDLLQPPRYNYKMVDILQK 351 (389)
T ss_pred HHHHHHHHHhhhccChhhHHHHHHHHHhcCCccccCCHHHH------HhcCCCCEEEEEeCCCCCCCHHHHHHHHHHhhh
Confidence 00 00 000000000 00 00000000000 01111 126799999999999999999998889888862
Q ss_pred ---CeEEEEecC-CCCCCCCCChHHHHHHHHHHHHh
Q 022534 262 ---VVKLQMIEG-AGHMPQEDWPEKVVDGLRYFFLN 293 (295)
Q Consensus 262 ---~~~~~~i~~-~gH~~~~e~p~~~~~~i~~fl~~ 293 (295)
+++++++++ +||++++|+|++|++.|++||.+
T Consensus 352 ~~~~a~l~~I~s~~GH~~~le~p~~~~~~I~~FL~~ 387 (389)
T PRK06765 352 QGKYAEVYEIESINGHMAGVFDIHLFEKKIYEFLNR 387 (389)
T ss_pred cCCCeEEEEECCCCCcchhhcCHHHHHHHHHHHHcc
Confidence 479999996 99999999999999999999964
|
|
| >KOG2382 consensus Predicted alpha/beta hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.86 E-value=2.3e-20 Score=158.09 Aligned_cols=237 Identities=21% Similarity=0.341 Sum_probs=148.5
Q ss_pred CCceEEEEcCCCCCCccchhhHHHhhhC-CCeEEEeCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhC---CCCc
Q 022534 34 RLGTIVFLHGAPSHSYSYRNVMSQMSDA-GFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEELDKLLDVLE---VKYP 109 (295)
Q Consensus 34 ~~~~vv~lHG~~~~~~~w~~~~~~l~~~-~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~l~~~~~~l~---~~~~ 109 (295)
..||++++||+-++...|.-+...|+.. +.+|++.|+|-||.|.+.... +...+++|+..|++..+ ...+
T Consensus 51 ~~Pp~i~lHGl~GS~~Nw~sv~k~Ls~~l~~~v~~vd~RnHG~Sp~~~~h------~~~~ma~dv~~Fi~~v~~~~~~~~ 124 (315)
T KOG2382|consen 51 RAPPAIILHGLLGSKENWRSVAKNLSRKLGRDVYAVDVRNHGSSPKITVH------NYEAMAEDVKLFIDGVGGSTRLDP 124 (315)
T ss_pred CCCceEEecccccCCCCHHHHHHHhcccccCceEEEecccCCCCcccccc------CHHHHHHHHHHHHHHcccccccCC
Confidence 4689999999999999999999999743 679999999999999975432 23689999999999874 2334
Q ss_pred eEEEEecccchH--HHHHHHHhCcCccceeEEEcCCCCCCCCCch----hhhhhh-cccc----h-------hhhhh-hH
Q 022534 110 FFLVVQGFLVGS--YGLTWALKNPSRISKLAILNSPLTASSPLPG----LFQQLR-IPLL----G-------EFTAQ-NA 170 (295)
Q Consensus 110 ~~lv~~G~~~G~--~~~~~a~~~p~~v~~lil~~~p~~~~~~~~~----~~~~~~-~~~~----~-------~~~~~-~~ 170 (295)
+.++ |||+|+ .++..+.++|+++..+++.+.+........+ .+.+++ .+.. . .+... ..
T Consensus 125 ~~l~--GHsmGG~~~~m~~t~~~p~~~~rliv~D~sP~~~~~~~~e~~e~i~~m~~~d~~~~~~~~rke~~~~l~~~~~d 202 (315)
T KOG2382|consen 125 VVLL--GHSMGGVKVAMAETLKKPDLIERLIVEDISPGGVGRSYGEYRELIKAMIQLDLSIGVSRGRKEALKSLIEVGFD 202 (315)
T ss_pred ceec--ccCcchHHHHHHHHHhcCcccceeEEEecCCccCCcccchHHHHHHHHHhccccccccccHHHHHHHHHHHhcc
Confidence 5565 777765 4556678999999999988643322111111 111111 1100 0 00000 00
Q ss_pred HHHHHHHHhCCCccccccccc-cccccccccCCch-hHHHHHHHhcchhhhhHhhhcCcCCCCCCCcEEEEEeCCCCCCC
Q 022534 171 IMAERFIEAGSPYVLKLDKAD-VYRLPYLASSGPG-FALLEAARKVNFKDISSRIGAGFSSGSWDKPVLVAWGISDKYLP 248 (295)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~~ 248 (295)
....+|+...... +..... .++.+. .+ ..++..+....+. .......+..|||++.|.++..++
T Consensus 203 ~~~~~fi~~nl~~--~~~~~s~~w~~nl-----~~i~~~~~~~~~~s~~-------~~l~~~~~~~pvlfi~g~~S~fv~ 268 (315)
T KOG2382|consen 203 NLVRQFILTNLKK--SPSDGSFLWRVNL-----DSIASLLDEYEILSYW-------ADLEDGPYTGPVLFIKGLQSKFVP 268 (315)
T ss_pred hHHHHHHHHhcCc--CCCCCceEEEeCH-----HHHHHHHHHHHhhccc-------ccccccccccceeEEecCCCCCcC
Confidence 0011222111000 000000 000000 00 0111111101100 111113678999999999999999
Q ss_pred cchHHHHHhcCCCCeEEEEecCCCCCCCCCChHHHHHHHHHHHHh
Q 022534 249 QSVAEEFQKGNPNVVKLQMIEGAGHMPQEDWPEKVVDGLRYFFLN 293 (295)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 293 (295)
.+.-.++.+.+|+ ++++++++|||++|.|+|++|++.|.+|+..
T Consensus 269 ~~~~~~~~~~fp~-~e~~~ld~aGHwVh~E~P~~~~~~i~~Fl~~ 312 (315)
T KOG2382|consen 269 DEHYPRMEKIFPN-VEVHELDEAGHWVHLEKPEEFIESISEFLEE 312 (315)
T ss_pred hhHHHHHHHhccc-hheeecccCCceeecCCHHHHHHHHHHHhcc
Confidence 9888999999998 7999999999999999999999999999864
|
|
| >TIGR03100 hydr1_PEP hydrolase, ortholog 1, exosortase system type 1 associated | Back alignment and domain information |
|---|
Probab=99.84 E-value=1.9e-19 Score=155.06 Aligned_cols=227 Identities=17% Similarity=0.253 Sum_probs=121.9
Q ss_pred CceEEEEcCCCC----CCccchhhHHHhhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh-----C
Q 022534 35 LGTIVFLHGAPS----HSYSYRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEELDKLLDVL-----E 105 (295)
Q Consensus 35 ~~~vv~lHG~~~----~~~~w~~~~~~l~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~l~~~~~~l-----~ 105 (295)
+++||++||++. ++..|..+++.|+++||+|+++|+||||.|+... ++.+++..|+.++++.+ +
T Consensus 26 ~~~vv~i~gg~~~~~g~~~~~~~la~~l~~~G~~v~~~Dl~G~G~S~~~~-------~~~~~~~~d~~~~~~~l~~~~~g 98 (274)
T TIGR03100 26 TTGVLIVVGGPQYRVGSHRQFVLLARRLAEAGFPVLRFDYRGMGDSEGEN-------LGFEGIDADIAAAIDAFREAAPH 98 (274)
T ss_pred CCeEEEEeCCccccCCchhHHHHHHHHHHHCCCEEEEeCCCCCCCCCCCC-------CCHHHHHHHHHHHHHHHHhhCCC
Confidence 457888888764 3334667788998889999999999999997532 13456777788777776 3
Q ss_pred CCCceEEEEecccchHH-HHHHHHhCcCccceeEEEcCCCCCCCCCchhhhhhhcccchhhhhhhHHHHHHHHHhCCCcc
Q 022534 106 VKYPFFLVVQGFLVGSY-GLTWALKNPSRISKLAILNSPLTASSPLPGLFQQLRIPLLGEFTAQNAIMAERFIEAGSPYV 184 (295)
Q Consensus 106 ~~~~~~lv~~G~~~G~~-~~~~a~~~p~~v~~lil~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (295)
.++ ++++ |||+|++ ++.+|. .+++|+++|+++++.......... ..+.-...... ......+... + .+-
T Consensus 99 ~~~-i~l~--G~S~Gg~~a~~~a~-~~~~v~~lil~~p~~~~~~~~~~~--~~~~~~~~~~~--~~~~~~~~~~-g-~~~ 168 (274)
T TIGR03100 99 LRR-IVAW--GLCDAASAALLYAP-ADLRVAGLVLLNPWVRTEAAQAAS--RIRHYYLGQLL--SADFWRKLLS-G-EVN 168 (274)
T ss_pred CCc-EEEE--EECHHHHHHHHHhh-hCCCccEEEEECCccCCcccchHH--HHHHHHHHHHh--ChHHHHHhcC-C-Ccc
Confidence 443 5565 7777754 455544 456899999986443211110100 00000000000 0000001100 0 000
Q ss_pred cccccccccc-cc-ccccCCchhHHHHHHHhcchhhhhHhhhcCcCCCCCCCcEEEEEeCCCCCCCcchH------HHHH
Q 022534 185 LKLDKADVYR-LP-YLASSGPGFALLEAARKVNFKDISSRIGAGFSSGSWDKPVLVAWGISDKYLPQSVA------EEFQ 256 (295)
Q Consensus 185 ~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~~~~~~------~~~~ 256 (295)
.....+.... .. ... .......... -++....+ .++++|+++++|++|+..+ ... .+..
T Consensus 169 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~-----~~~~~~~l------~~~~~P~ll~~g~~D~~~~-~~~~~~~~~~~~~ 235 (274)
T TIGR03100 169 LGSSLRGLGDALLKARQ-KGDEVAHGGL-----AERMKAGL------ERFQGPVLFILSGNDLTAQ-EFADSVLGEPAWR 235 (274)
T ss_pred HHHHHHHHHHHHHhhhh-cCCCcccchH-----HHHHHHHH------HhcCCcEEEEEcCcchhHH-HHHHHhccChhhH
Confidence 0000000000 00 000 0000000000 01111111 1458999999999998753 222 3344
Q ss_pred hcC--CCCeEEEEecCCCCCCC-CCChHHHHHHHHHHHH
Q 022534 257 KGN--PNVVKLQMIEGAGHMPQ-EDWPEKVVDGLRYFFL 292 (295)
Q Consensus 257 ~~~--~~~~~~~~i~~~gH~~~-~e~p~~~~~~i~~fl~ 292 (295)
+.+ ++ ++++.+++++|.+. .+.++++.+.|.+||.
T Consensus 236 ~~l~~~~-v~~~~~~~~~H~l~~e~~~~~v~~~i~~wL~ 273 (274)
T TIGR03100 236 GALEDPG-IERVEIDGADHTFSDRVWREWVAARTTEWLR 273 (274)
T ss_pred HHhhcCC-eEEEecCCCCcccccHHHHHHHHHHHHHHHh
Confidence 433 55 79999999999984 4557999999999985
|
This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 2, TIGR03101) of the same superfamily. |
| >PRK05077 frsA fermentation/respiration switch protein; Reviewed | Back alignment and domain information |
|---|
Probab=99.84 E-value=7.3e-19 Score=159.30 Aligned_cols=214 Identities=19% Similarity=0.216 Sum_probs=129.7
Q ss_pred CCceEEEEcCCCCCC-ccchhhHHHhhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh---CCCCc
Q 022534 34 RLGTIVFLHGAPSHS-YSYRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEELDKLLDVL---EVKYP 109 (295)
Q Consensus 34 ~~~~vv~lHG~~~~~-~~w~~~~~~l~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~l~~~~~~l---~~~~~ 109 (295)
+.|+||+.||+.+.. ..|..+++.|+++||.|+++|+||||.|.+.... .........+.+++... +.+ .
T Consensus 193 ~~P~Vli~gG~~~~~~~~~~~~~~~La~~Gy~vl~~D~pG~G~s~~~~~~-----~d~~~~~~avld~l~~~~~vd~~-r 266 (414)
T PRK05077 193 PFPTVLVCGGLDSLQTDYYRLFRDYLAPRGIAMLTIDMPSVGFSSKWKLT-----QDSSLLHQAVLNALPNVPWVDHT-R 266 (414)
T ss_pred CccEEEEeCCcccchhhhHHHHHHHHHhCCCEEEEECCCCCCCCCCCCcc-----ccHHHHHHHHHHHHHhCcccCcc-c
Confidence 355666655655543 5688888999888999999999999999753211 12233445566666554 333 3
Q ss_pred eEEEEecccch-HHHHHHHHhCcCccceeEEEcCCCCCCCCCchhhhhhhcccchhhhhhhHHHHHHHHHhCCCcccccc
Q 022534 110 FFLVVQGFLVG-SYGLTWALKNPSRISKLAILNSPLTASSPLPGLFQQLRIPLLGEFTAQNAIMAERFIEAGSPYVLKLD 188 (295)
Q Consensus 110 ~~lv~~G~~~G-~~~~~~a~~~p~~v~~lil~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (295)
+.++ |+|+| .+++.+|..+|++|+++|+++++............ ..+. . .. ..+..+ + +.+.
T Consensus 267 i~l~--G~S~GG~~Al~~A~~~p~ri~a~V~~~~~~~~~~~~~~~~~--~~p~---~-~~-~~la~~-l--g~~~----- 329 (414)
T PRK05077 267 VAAF--GFRFGANVAVRLAYLEPPRLKAVACLGPVVHTLLTDPKRQQ--QVPE---M-YL-DVLASR-L--GMHD----- 329 (414)
T ss_pred EEEE--EEChHHHHHHHHHHhCCcCceEEEEECCccchhhcchhhhh--hchH---H-HH-HHHHHH-h--CCCC-----
Confidence 5565 77765 56778888899999999988665431100010000 0000 0 00 000000 0 0000
Q ss_pred ccccccccccccCCchhHHHHHHHhcchhhhhHhhhcCcCCCCCCCcEEEEEeCCCCCCCcchHHHHHhcCCCCeEEEEe
Q 022534 189 KADVYRLPYLASSGPGFALLEAARKVNFKDISSRIGAGFSSGSWDKPVLVAWGISDKYLPQSVAEEFQKGNPNVVKLQMI 268 (295)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~i 268 (295)
.+ . ..+...+....++.. ..+ ..++++|+|+|+|++|+++|++.++.+.+..++ .+++++
T Consensus 330 -~~-----------~-~~l~~~l~~~sl~~~-~~l-----~~~i~~PvLiI~G~~D~ivP~~~a~~l~~~~~~-~~l~~i 389 (414)
T PRK05077 330 -AS-----------D-EALRVELNRYSLKVQ-GLL-----GRRCPTPMLSGYWKNDPFSPEEDSRLIASSSAD-GKLLEI 389 (414)
T ss_pred -CC-----------h-HHHHHHhhhccchhh-hhh-----ccCCCCcEEEEecCCCCCCCHHHHHHHHHhCCC-CeEEEc
Confidence 00 0 001111111111100 000 136789999999999999999999988888886 699999
Q ss_pred cCCCCCCCCCChHHHHHHHHHHHHh
Q 022534 269 EGAGHMPQEDWPEKVVDGLRYFFLN 293 (295)
Q Consensus 269 ~~~gH~~~~e~p~~~~~~i~~fl~~ 293 (295)
|++ ++.|.++++++.|.+||+.
T Consensus 390 ~~~---~~~e~~~~~~~~i~~wL~~ 411 (414)
T PRK05077 390 PFK---PVYRNFDKALQEISDWLED 411 (414)
T ss_pred cCC---CccCCHHHHHHHHHHHHHH
Confidence 997 5668999999999999986
|
|
| >COG1647 Esterase/lipase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.84 E-value=7e-20 Score=145.89 Aligned_cols=221 Identities=20% Similarity=0.325 Sum_probs=138.8
Q ss_pred eEEEEcCCCCCCccchhhHHHhhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh---CCCCceEEE
Q 022534 37 TIVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEELDKLLDVL---EVKYPFFLV 113 (295)
Q Consensus 37 ~vv~lHG~~~~~~~w~~~~~~l~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~l~~~~~~l---~~~~~~~lv 113 (295)
.|||||||.++....+.+..+|.+.||+|.||-+||||-.... . -..+.+++.+++.+--+.| +.+. +.++
T Consensus 17 AVLllHGFTGt~~Dvr~Lgr~L~e~GyTv~aP~ypGHG~~~e~--f---l~t~~~DW~~~v~d~Y~~L~~~gy~e-I~v~ 90 (243)
T COG1647 17 AVLLLHGFTGTPRDVRMLGRYLNENGYTVYAPRYPGHGTLPED--F---LKTTPRDWWEDVEDGYRDLKEAGYDE-IAVV 90 (243)
T ss_pred EEEEEeccCCCcHHHHHHHHHHHHCCceEecCCCCCCCCCHHH--H---hcCCHHHHHHHHHHHHHHHHHcCCCe-EEEE
Confidence 7999999999999999999999999999999999999966521 1 1224567777776665554 4454 4444
Q ss_pred EecccchH-HHHHHHHhCcCccceeEEEcCCCCCCCCCchhhhhhhcccchhhhhhhHHHHHHHHHhCCCcccccccccc
Q 022534 114 VQGFLVGS-YGLTWALKNPSRISKLAILNSPLTASSPLPGLFQQLRIPLLGEFTAQNAIMAERFIEAGSPYVLKLDKADV 192 (295)
Q Consensus 114 ~~G~~~G~-~~~~~a~~~p~~v~~lil~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (295)
|.|+|+ +++.+|..+| +++++.+++|.....+.. ... +++. +. ++. +.+ +...+. ...++.
T Consensus 91 --GlSmGGv~alkla~~~p--~K~iv~m~a~~~~k~~~~-iie----~~l~-y~-~~~---kk~-e~k~~e---~~~~e~ 152 (243)
T COG1647 91 --GLSMGGVFALKLAYHYP--PKKIVPMCAPVNVKSWRI-IIE----GLLE-YF-RNA---KKY-EGKDQE---QIDKEM 152 (243)
T ss_pred --eecchhHHHHHHHhhCC--ccceeeecCCcccccchh-hhH----HHHH-HH-HHh---hhc-cCCCHH---HHHHHH
Confidence 777764 6888899998 799999987765443211 000 0000 00 000 000 000000 000000
Q ss_pred ccccccccCCchhHHHHHHHhcchhhhhHhhhcCcCCCCCCCcEEEEEeCCCCCCCcchHHHHHhc-CCCCeEEEEecCC
Q 022534 193 YRLPYLASSGPGFALLEAARKVNFKDISSRIGAGFSSGSWDKPVLVAWGISDKYLPQSVAEEFQKG-NPNVVKLQMIEGA 271 (295)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~-~~~~~~~~~i~~~ 271 (295)
.. +... +.....+ +....+.+... ...|..|++++.|++|+.+|.+.+..+... .+.+.++.+++++
T Consensus 153 ~~--~~~~--~~~~~~~------~~~~i~~~~~~--~~~I~~pt~vvq~~~D~mv~~~sA~~Iy~~v~s~~KeL~~~e~S 220 (243)
T COG1647 153 KS--YKDT--PMTTTAQ------LKKLIKDARRS--LDKIYSPTLVVQGRQDEMVPAESANFIYDHVESDDKELKWLEGS 220 (243)
T ss_pred HH--hhcc--hHHHHHH------HHHHHHHHHhh--hhhcccchhheecccCCCCCHHHHHHHHHhccCCcceeEEEccC
Confidence 00 0000 0000000 11222222211 126789999999999999999999888765 4556799999999
Q ss_pred CCCCCCC-ChHHHHHHHHHHHHh
Q 022534 272 GHMPQED-WPEKVVDGLRYFFLN 293 (295)
Q Consensus 272 gH~~~~e-~p~~~~~~i~~fl~~ 293 (295)
||....+ +.|++.+.|..||++
T Consensus 221 gHVIt~D~Erd~v~e~V~~FL~~ 243 (243)
T COG1647 221 GHVITLDKERDQVEEDVITFLEK 243 (243)
T ss_pred CceeecchhHHHHHHHHHHHhhC
Confidence 9987554 689999999999974
|
|
| >PRK10985 putative hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=99.84 E-value=5e-19 Score=156.12 Aligned_cols=230 Identities=17% Similarity=0.165 Sum_probs=120.0
Q ss_pred CCceEEEEcCCCCCCcc--chhhHHHhhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCceE
Q 022534 34 RLGTIVFLHGAPSHSYS--YRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEELDKLLDVLEVKYPFF 111 (295)
Q Consensus 34 ~~~~vv~lHG~~~~~~~--w~~~~~~l~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~~ 111 (295)
.+|+||++||+++++.. +..+++.|.++||+|+++|+||||.|........... ..+|....+..+.++++.. +++
T Consensus 57 ~~p~vll~HG~~g~~~~~~~~~~~~~l~~~G~~v~~~d~rG~g~~~~~~~~~~~~~-~~~D~~~~i~~l~~~~~~~-~~~ 134 (324)
T PRK10985 57 HKPRLVLFHGLEGSFNSPYAHGLLEAAQKRGWLGVVMHFRGCSGEPNRLHRIYHSG-ETEDARFFLRWLQREFGHV-PTA 134 (324)
T ss_pred CCCEEEEeCCCCCCCcCHHHHHHHHHHHHCCCEEEEEeCCCCCCCccCCcceECCC-chHHHHHHHHHHHHhCCCC-CEE
Confidence 46899999999887654 4568888988899999999999998754321110111 1233333333343344433 466
Q ss_pred EEEecccchH-HHHHHHHhCcCc--cceeEEEcCCCCCCCCCchhhhhhhcccchhhhhhhH-HHHHHHHHhCCCccccc
Q 022534 112 LVVQGFLVGS-YGLTWALKNPSR--ISKLAILNSPLTASSPLPGLFQQLRIPLLGEFTAQNA-IMAERFIEAGSPYVLKL 187 (295)
Q Consensus 112 lv~~G~~~G~-~~~~~a~~~p~~--v~~lil~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 187 (295)
++ |||+|+ +++.++.++++. +++++++++|...... ..........+...+..... ....+....... ....
T Consensus 135 ~v--G~S~GG~i~~~~~~~~~~~~~~~~~v~i~~p~~~~~~-~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~-~~~~ 210 (324)
T PRK10985 135 AV--GYSLGGNMLACLLAKEGDDLPLDAAVIVSAPLMLEAC-SYRMEQGFSRVYQRYLLNLLKANAARKLAAYPG-TLPI 210 (324)
T ss_pred EE--EecchHHHHHHHHHhhCCCCCccEEEEEcCCCCHHHH-HHHHhhhHHHHHHHHHHHHHHHHHHHHHHhccc-cccC
Confidence 66 777775 566667666543 8889988877643210 00000000000000000000 000000000000 0000
Q ss_pred ccccccccc-------ccccCCchhH-HHHHHHhcchhhhhHhhhcCcCCCCCCCcEEEEEeCCCCCCCcchHHHHHhcC
Q 022534 188 DKADVYRLP-------YLASSGPGFA-LLEAARKVNFKDISSRIGAGFSSGSWDKPVLVAWGISDKYLPQSVAEEFQKGN 259 (295)
Q Consensus 188 ~~~~~~~~~-------~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~ 259 (295)
......+.. .......++. ..+.....+. ...+ +++++|+++|+|++|++++++....+.+..
T Consensus 211 ~~~~~~~~~~~~~fd~~~~~~~~g~~~~~~~y~~~~~---~~~l------~~i~~P~lii~g~~D~~~~~~~~~~~~~~~ 281 (324)
T PRK10985 211 NLAQLKSVRRLREFDDLITARIHGFADAIDYYRQCSA---LPLL------NQIRKPTLIIHAKDDPFMTHEVIPKPESLP 281 (324)
T ss_pred CHHHHhcCCcHHHHhhhheeccCCCCCHHHHHHHCCh---HHHH------hCCCCCEEEEecCCCCCCChhhChHHHHhC
Confidence 000000000 0000000111 1111111111 1111 367899999999999999888777777777
Q ss_pred CCCeEEEEecCCCCCCCCCC
Q 022534 260 PNVVKLQMIEGAGHMPQEDW 279 (295)
Q Consensus 260 ~~~~~~~~i~~~gH~~~~e~ 279 (295)
++ +++++++++||+.++|.
T Consensus 282 ~~-~~~~~~~~~GH~~~~~g 300 (324)
T PRK10985 282 PN-VEYQLTEHGGHVGFVGG 300 (324)
T ss_pred CC-eEEEECCCCCceeeCCC
Confidence 76 79999999999999874
|
|
| >PF00561 Abhydrolase_1: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases | Back alignment and domain information |
|---|
Probab=99.81 E-value=4.5e-20 Score=153.88 Aligned_cols=217 Identities=21% Similarity=0.295 Sum_probs=121.7
Q ss_pred CeEEEeCCCCCCCCCCC-CCCCCCCCCCHHHHHHHHHHHHHHhCCCCceEEEEecccch-HHHHHHHHhCcCccceeEEE
Q 022534 63 FHCFAPDWLGFGFSDKP-EKGYDDFDFTENEFHEELDKLLDVLEVKYPFFLVVQGFLVG-SYGLTWALKNPSRISKLAIL 140 (295)
Q Consensus 63 ~~via~Dl~G~G~S~~~-~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~~lv~~G~~~G-~~~~~~a~~~p~~v~~lil~ 140 (295)
|+|+++|+||+|.|+.. ... ...|+.+++++++..++++++.++ +.++ |||+| .+++.+|+++|++|++++++
T Consensus 1 f~vi~~d~rG~g~S~~~~~~~--~~~~~~~~~~~~~~~~~~~l~~~~-~~~v--G~S~Gg~~~~~~a~~~p~~v~~lvl~ 75 (230)
T PF00561_consen 1 FDVILFDLRGFGYSSPHWDPD--FPDYTTDDLAADLEALREALGIKK-INLV--GHSMGGMLALEYAAQYPERVKKLVLI 75 (230)
T ss_dssp EEEEEEECTTSTTSSSCCGSG--SCTHCHHHHHHHHHHHHHHHTTSS-EEEE--EETHHHHHHHHHHHHSGGGEEEEEEE
T ss_pred CEEEEEeCCCCCCCCCCccCC--cccccHHHHHHHHHHHHHHhCCCC-eEEE--EECCChHHHHHHHHHCchhhcCcEEE
Confidence 79999999999999940 111 235688999999999999999987 6676 77776 46889999999999999998
Q ss_pred cCCC----CCCC-CCch-hhhhhhc-ccchhhhhhhHHHHHHHHHhCCCcccccc-ccccccccc---cccCCchhHHHH
Q 022534 141 NSPL----TASS-PLPG-LFQQLRI-PLLGEFTAQNAIMAERFIEAGSPYVLKLD-KADVYRLPY---LASSGPGFALLE 209 (295)
Q Consensus 141 ~~p~----~~~~-~~~~-~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~---~~~~~~~~~~~~ 209 (295)
+++. .... ..+. ....... ................+... ....... ......... ............
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (230)
T PF00561_consen 76 SPPPDLPDGLWNRIWPRGNLQGQLLDNFFNFLSDPIKPLLGRWPKQ--FFAYDREFVEDFLKQFQSQQYARFAETDAFDN 153 (230)
T ss_dssp SESSHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHTHHHHHHHHHHHHTCHHHHHHH
T ss_pred eeeccchhhhhHHHHhhhhhhhhHHHhhhccccccchhhhhhhhhh--eeeccCccccchhhccchhhhhHHHHHHHHhh
Confidence 7642 0000 0000 0000000 00000000000000000000 0000000 000000000 000000000000
Q ss_pred HHHhcchhhhhHhhhcCcCCCCCCCcEEEEEeCCCCCCCcchHHHHHhcCCCCeEEEEecCCCCCCCCCChHHHHHHHHH
Q 022534 210 AARKVNFKDISSRIGAGFSSGSWDKPVLVAWGISDKYLPQSVAEEFQKGNPNVVKLQMIEGAGHMPQEDWPEKVVDGLRY 289 (295)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~ 289 (295)
................ ....+++|+++++|++|+++|++.+..+.+.+|+ .++++++++||..++|.|+++++.|.+
T Consensus 154 ~~~~~~~~~~~~~~~~--~l~~i~~p~l~i~~~~D~~~p~~~~~~~~~~~~~-~~~~~~~~~GH~~~~~~~~~~~~~i~~ 230 (230)
T PF00561_consen 154 MFWNALGYFSVWDPSP--ALSNIKVPTLIIWGEDDPLVPPESSEQLAKLIPN-SQLVLIEGSGHFAFLEGPDEFNEIIIK 230 (230)
T ss_dssp HHHHHHHHHHHHHHHH--HHTTTTSEEEEEEETTCSSSHHHHHHHHHHHSTT-EEEEEETTCCSTHHHHSHHHHHHHHH-
T ss_pred hccccccccccccccc--cccccCCCeEEEEeCCCCCCCHHHHHHHHHhcCC-CEEEECCCCChHHHhcCHHhhhhhhcC
Confidence 0000000000000000 0126899999999999999999999999999998 799999999999999999999998863
|
; InterPro: IPR000073 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents fold-1 of alpha/beta hydrolase.; PDB: 2VAT_E 2VAX_C 2VAV_H 2PSJ_A 2PSH_B 2PSE_A 2PSF_A 2PSD_A 2EDA_A 1CIJ_A .... |
| >PRK13604 luxD acyl transferase; Provisional | Back alignment and domain information |
|---|
Probab=99.80 E-value=2e-17 Score=141.67 Aligned_cols=230 Identities=15% Similarity=0.143 Sum_probs=129.6
Q ss_pred cccccceeeEEe-CcEEEEEEEcCCC---CCCCceEEEEcCCCCCCccchhhHHHhhhCCCeEEEeCCCCC-CCCCCCCC
Q 022534 7 NKGREYGSYIKS-GEYRWFVRETGSA---DSRLGTIVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGF-GFSDKPEK 81 (295)
Q Consensus 7 ~~~~~~~~~~~~-~~~~~~~~~~g~~---~~~~~~vv~lHG~~~~~~~w~~~~~~l~~~~~~via~Dl~G~-G~S~~~~~ 81 (295)
+++.-|.-.+.+ +|..+.....-+. ..++++||+.||++++...+..+++.|+++||.|+.+|.||| |.|++...
T Consensus 5 ~~~~~~~~~~~~~dG~~L~Gwl~~P~~~~~~~~~~vIi~HGf~~~~~~~~~~A~~La~~G~~vLrfD~rg~~GeS~G~~~ 84 (307)
T PRK13604 5 SSFKTIDHVICLENGQSIRVWETLPKENSPKKNNTILIASGFARRMDHFAGLAEYLSSNGFHVIRYDSLHHVGLSSGTID 84 (307)
T ss_pred ccccchhheEEcCCCCEEEEEEEcCcccCCCCCCEEEEeCCCCCChHHHHHHHHHHHHCCCEEEEecCCCCCCCCCCccc
Confidence 333445555555 5777777655442 234578999999999876688999999999999999999998 99986432
Q ss_pred CCCCCCCCHHHHHHHHHHHHH---HhCCCCceEEEEecccchHHHHHHHHhCcCccceeEEEcCCCCCCCCCchhhhhhh
Q 022534 82 GYDDFDFTENEFHEELDKLLD---VLEVKYPFFLVVQGFLVGSYGLTWALKNPSRISKLAILNSPLTASSPLPGLFQQLR 158 (295)
Q Consensus 82 ~~~~~~~~~~~~~~~l~~~~~---~l~~~~~~~lv~~G~~~G~~~~~~a~~~p~~v~~lil~~~p~~~~~~~~~~~~~~~ 158 (295)
.. +......|+..+++ ..+.+ ++.|+ |||+|+..+..++..+ +++.+|+. ||+.... ..+.. .
T Consensus 85 ~~-----t~s~g~~Dl~aaid~lk~~~~~-~I~Li--G~SmGgava~~~A~~~-~v~~lI~~-sp~~~l~---d~l~~-~ 150 (307)
T PRK13604 85 EF-----TMSIGKNSLLTVVDWLNTRGIN-NLGLI--AASLSARIAYEVINEI-DLSFLITA-VGVVNLR---DTLER-A 150 (307)
T ss_pred cC-----cccccHHHHHHHHHHHHhcCCC-ceEEE--EECHHHHHHHHHhcCC-CCCEEEEc-CCcccHH---HHHHH-h
Confidence 21 22223455544444 33434 46665 7888764333333333 47877765 5654321 11110 0
Q ss_pred cccchhhhhhhHHHHHHHHHhCCCccccccccccccccccccCCch-hHHHHHHHhcchh---hhhHhhhcCcCCCCCCC
Q 022534 159 IPLLGEFTAQNAIMAERFIEAGSPYVLKLDKADVYRLPYLASSGPG-FALLEAARKVNFK---DISSRIGAGFSSGSWDK 234 (295)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~ 234 (295)
... .+. ..+........+ + .-...+ ..++......++. ...+.+ +.+++
T Consensus 151 ~~~--~~~-------------~~p~~~lp~~~d-~-----~g~~l~~~~f~~~~~~~~~~~~~s~i~~~------~~l~~ 203 (307)
T PRK13604 151 LGY--DYL-------------SLPIDELPEDLD-F-----EGHNLGSEVFVTDCFKHGWDTLDSTINKM------KGLDI 203 (307)
T ss_pred hhc--ccc-------------cCcccccccccc-c-----ccccccHHHHHHHHHhcCccccccHHHHH------hhcCC
Confidence 000 000 000000000000 0 000000 1112211111111 011111 25689
Q ss_pred cEEEEEeCCCCCCCcchHHHHHhcCC-CCeEEEEecCCCCCCCC
Q 022534 235 PVLVAWGISDKYLPQSVAEEFQKGNP-NVVKLQMIEGAGHMPQE 277 (295)
Q Consensus 235 P~l~i~G~~D~~~~~~~~~~~~~~~~-~~~~~~~i~~~gH~~~~ 277 (295)
|+|+|||++|.++|++.+..+++..+ ..++++++||++|...+
T Consensus 204 PvLiIHG~~D~lVp~~~s~~l~e~~~s~~kkl~~i~Ga~H~l~~ 247 (307)
T PRK13604 204 PFIAFTANNDSWVKQSEVIDLLDSIRSEQCKLYSLIGSSHDLGE 247 (307)
T ss_pred CEEEEEcCCCCccCHHHHHHHHHHhccCCcEEEEeCCCccccCc
Confidence 99999999999999999999988764 35899999999998643
|
|
| >PLN02872 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=99.80 E-value=2e-18 Score=154.81 Aligned_cols=280 Identities=17% Similarity=0.224 Sum_probs=153.6
Q ss_pred ccccceeeEEe-CcEEEEEEEcCCC-----CCCCceEEEEcCCCCCCccch------hhHHHhhhCCCeEEEeCCCCCCC
Q 022534 8 KGREYGSYIKS-GEYRWFVRETGSA-----DSRLGTIVFLHGAPSHSYSYR------NVMSQMSDAGFHCFAPDWLGFGF 75 (295)
Q Consensus 8 ~~~~~~~~~~~-~~~~~~~~~~g~~-----~~~~~~vv~lHG~~~~~~~w~------~~~~~l~~~~~~via~Dl~G~G~ 75 (295)
-++.+-.+|+. +|+.+.......+ ...+|+|+|+||++.++..|. .++..|+++||+|+++|+||+|.
T Consensus 41 gy~~e~h~v~T~DGy~L~l~ri~~~~~~~~~~~~~~Vll~HGl~~ss~~w~~~~~~~sla~~La~~GydV~l~n~RG~~~ 120 (395)
T PLN02872 41 GYSCTEHTIQTKDGYLLALQRVSSRNPRLGSQRGPPVLLQHGLFMAGDAWFLNSPEQSLGFILADHGFDVWVGNVRGTRW 120 (395)
T ss_pred CCCceEEEEECCCCcEEEEEEcCCCCCCCCCCCCCeEEEeCcccccccceeecCcccchHHHHHhCCCCccccccccccc
Confidence 35555556655 6888887664211 123579999999998888884 23445777899999999999987
Q ss_pred CCCCC----CCCCCCCCCHHHHH-HHHHHHHHHhC--CCCceEEEEecccchHHHHHHHHhCcC---ccceeEEEcCCCC
Q 022534 76 SDKPE----KGYDDFDFTENEFH-EELDKLLDVLE--VKYPFFLVVQGFLVGSYGLTWALKNPS---RISKLAILNSPLT 145 (295)
Q Consensus 76 S~~~~----~~~~~~~~~~~~~~-~~l~~~~~~l~--~~~~~~lv~~G~~~G~~~~~~a~~~p~---~v~~lil~~~p~~ 145 (295)
|.+.. ....-.+++.++++ .|+.++++.+. ..++++++ |||+|+..+..++.+|+ +|+.++++++...
T Consensus 121 s~gh~~~~~~~~~fw~~s~~e~a~~Dl~a~id~i~~~~~~~v~~V--GhS~Gg~~~~~~~~~p~~~~~v~~~~~l~P~~~ 198 (395)
T PLN02872 121 SYGHVTLSEKDKEFWDWSWQELALYDLAEMIHYVYSITNSKIFIV--GHSQGTIMSLAALTQPNVVEMVEAAALLCPISY 198 (395)
T ss_pred ccCCCCCCccchhccCCcHHHHHHHHHHHHHHHHHhccCCceEEE--EECHHHHHHHHHhhChHHHHHHHHHHHhcchhh
Confidence 74311 11101246777787 79999999862 12456776 77887643335557776 5777777643322
Q ss_pred CCCCCchhhhhhhcc----c---ch--hhhhhhHHH---HHHH----------H--HhCCCccccccccccccccccccC
Q 022534 146 ASSPLPGLFQQLRIP----L---LG--EFTAQNAIM---AERF----------I--EAGSPYVLKLDKADVYRLPYLASS 201 (295)
Q Consensus 146 ~~~~~~~~~~~~~~~----~---~~--~~~~~~~~~---~~~~----------~--~~~~~~~~~~~~~~~~~~~~~~~~ 201 (295)
...........+... + ++ ++...+..+ ...+ + -.+....+.. .+++.....
T Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~C~~~~~c~~~~~~~~g~~~~~n~-----~~~~~~~~~ 273 (395)
T PLN02872 199 LDHVTAPLVLRMVFMHLDQMVVAMGIHQLNFRSDVLVKLLDSICEGHMDCNDLLTSITGTNCCFNA-----SRIDYYLEY 273 (395)
T ss_pred hccCCCHHHHHHHHHhHHHHHHHhcCceecCCcHHHHHHHHHHccCchhHHHHHHHHhCCCcccch-----hhhhHHHhc
Confidence 111111111000000 0 00 000000000 0000 0 0000000000 011111111
Q ss_pred Cc-h---hHH---HHHHHhcchh-------hhhHh----hhcCcCCCCC--CCcEEEEEeCCCCCCCcchHHHHHhcCCC
Q 022534 202 GP-G---FAL---LEAARKVNFK-------DISSR----IGAGFSSGSW--DKPVLVAWGISDKYLPQSVAEEFQKGNPN 261 (295)
Q Consensus 202 ~~-~---~~~---~~~~~~~~~~-------~~~~~----~~~~~~~~~~--~~P~l~i~G~~D~~~~~~~~~~~~~~~~~ 261 (295)
.| | ..+ .+..+.-.|. ..... .+..+...++ ++|+++++|++|.+++++...++.+.+++
T Consensus 274 ~pagtS~k~~~H~~Q~~~s~~f~~yDyg~~~n~~~Yg~~~pP~Y~l~~i~~~~Pv~i~~G~~D~lv~~~dv~~l~~~Lp~ 353 (395)
T PLN02872 274 EPHPSSVKNLRHLFQMIRKGTFAHYDYGIFKNLKLYGQVNPPAFDLSLIPKSLPLWMGYGGTDGLADVTDVEHTLAELPS 353 (395)
T ss_pred CCCcchHHHHHHHHHHHhcCCcccCCCCchhhHHHhCCCCCCCcCcccCCCCccEEEEEcCCCCCCCHHHHHHHHHHCCC
Confidence 00 0 000 1111100010 00000 0111223345 58999999999999999888999888887
Q ss_pred CeEEEEecCCCCC---CCCCChHHHHHHHHHHHHhc
Q 022534 262 VVKLQMIEGAGHM---PQEDWPEKVVDGLRYFFLNY 294 (295)
Q Consensus 262 ~~~~~~i~~~gH~---~~~e~p~~~~~~i~~fl~~~ 294 (295)
..+++.+++++|. ...|.|+++.+.|.+|+..+
T Consensus 354 ~~~l~~l~~~gH~dfi~~~eape~V~~~Il~fL~~~ 389 (395)
T PLN02872 354 KPELLYLENYGHIDFLLSTSAKEDVYNHMIQFFRSL 389 (395)
T ss_pred ccEEEEcCCCCCHHHHhCcchHHHHHHHHHHHHHHh
Confidence 5689999999995 56799999999999999764
|
|
| >COG0596 MhpC Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.80 E-value=8.2e-18 Score=141.27 Aligned_cols=263 Identities=24% Similarity=0.350 Sum_probs=143.8
Q ss_pred EEeCcEEEEEEEcCCCCCCCceEEEEcCCCCCCccchhhHHHhhhC--CCeEEEeCCCCCCCCCCCCCCCCCCCCCHHHH
Q 022534 16 IKSGEYRWFVRETGSADSRLGTIVFLHGAPSHSYSYRNVMSQMSDA--GFHCFAPDWLGFGFSDKPEKGYDDFDFTENEF 93 (295)
Q Consensus 16 ~~~~~~~~~~~~~g~~~~~~~~vv~lHG~~~~~~~w~~~~~~l~~~--~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~ 93 (295)
....+..+.|...+.+ .|+++++||++++...|......+... .|+|+++|+||||.|. .. .++...+
T Consensus 5 ~~~~~~~~~~~~~~~~---~~~i~~~hg~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~g~g~s~-~~------~~~~~~~ 74 (282)
T COG0596 5 LAADGVRLAYREAGGG---GPPLVLLHGFPGSSSVWRPVFKVLPALAARYRVIAPDLRGHGRSD-PA------GYSLSAY 74 (282)
T ss_pred ccCCCeEEEEeecCCC---CCeEEEeCCCCCchhhhHHHHHHhhccccceEEEEecccCCCCCC-cc------cccHHHH
Confidence 3445667777776654 358999999999999998843343321 2899999999999998 11 1234456
Q ss_pred HHHHHHHHHHhCCCCceEEEEecccch-HHHHHHHHhCcCccceeEEEcCCCCCCCCCchh---hhhhhcccchhhhhhh
Q 022534 94 HEELDKLLDVLEVKYPFFLVVQGFLVG-SYGLTWALKNPSRISKLAILNSPLTASSPLPGL---FQQLRIPLLGEFTAQN 169 (295)
Q Consensus 94 ~~~l~~~~~~l~~~~~~~lv~~G~~~G-~~~~~~a~~~p~~v~~lil~~~p~~~~~~~~~~---~~~~~~~~~~~~~~~~ 169 (295)
+.++..++++++..+ ++++ |||+| .++..++.++|++++++++++++.......... ................
T Consensus 75 ~~~~~~~~~~~~~~~-~~l~--G~S~Gg~~~~~~~~~~p~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (282)
T COG0596 75 ADDLAALLDALGLEK-VVLV--GHSMGGAVALALALRHPDRVRGLVLIGPAPPPGLLEAALRQPAGAAPLAALADLLLGL 151 (282)
T ss_pred HHHHHHHHHHhCCCc-eEEE--EecccHHHHHHHHHhcchhhheeeEecCCCCcccccCccccCccccchhhhhhhhhcc
Confidence 899999999999876 5666 66666 567888999999999999987543311000000 0000000000000000
Q ss_pred -HHHHHHHHHhCC-Ccccccc--ccccccccccccCCchhHHHHHHHhcchhhhhHhhhc---CcCCCCCCCcEEEEEeC
Q 022534 170 -AIMAERFIEAGS-PYVLKLD--KADVYRLPYLASSGPGFALLEAARKVNFKDISSRIGA---GFSSGSWDKPVLVAWGI 242 (295)
Q Consensus 170 -~~~~~~~~~~~~-~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~P~l~i~G~ 242 (295)
......+..... ....... ......... ........................... ......+++|+++++|+
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~ 230 (282)
T COG0596 152 DAAAFAALLAALGLLAALAAAARAGLAEALRA-PLLGAAAAAFARAARADLAAALLALLDRDLRAALARITVPTLIIHGE 230 (282)
T ss_pred chhhhhhhhhcccccccccccchhcccccccc-ccchhHhhhhhhhcccccchhhhcccccccchhhccCCCCeEEEecC
Confidence 000000000000 0000000 000000000 000000000000000000000000000 01123568999999999
Q ss_pred CCCCCCcchHHHHHhcCCCCeEEEEecCCCCCCCCCChHHHHHHHHHHHH
Q 022534 243 SDKYLPQSVAEEFQKGNPNVVKLQMIEGAGHMPQEDWPEKVVDGLRYFFL 292 (295)
Q Consensus 243 ~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~ 292 (295)
+|.+.+......+.+..+..+++++++++||++++|+|+.+++.+.+|+.
T Consensus 231 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~i~~~~~ 280 (282)
T COG0596 231 DDPVVPAELARRLAAALPNDARLVVIPGAGHFPHLEAPEAFAAALLAFLE 280 (282)
T ss_pred CCCcCCHHHHHHHHhhCCCCceEEEeCCCCCcchhhcHHHHHHHHHHHHh
Confidence 99666655456666666633699999999999999999999999998543
|
|
| >PRK10566 esterase; Provisional | Back alignment and domain information |
|---|
Probab=99.79 E-value=1.6e-17 Score=141.04 Aligned_cols=221 Identities=17% Similarity=0.230 Sum_probs=121.9
Q ss_pred EEEEEEEcCCCCCCCceEEEEcCCCCCCccchhhHHHhhhCCCeEEEeCCCCCCCCCCCCCCCCCCC--C-CHHHHHHHH
Q 022534 21 YRWFVRETGSADSRLGTIVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFD--F-TENEFHEEL 97 (295)
Q Consensus 21 ~~~~~~~~g~~~~~~~~vv~lHG~~~~~~~w~~~~~~l~~~~~~via~Dl~G~G~S~~~~~~~~~~~--~-~~~~~~~~l 97 (295)
..++|...+.++.+.|+||++||++++...|..++..|+++||+|+++|+||||.|....... ... + ....-.+++
T Consensus 13 ~~~~~~p~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~G~~~~~~~~~-~~~~~~~~~~~~~~~~ 91 (249)
T PRK10566 13 EVLHAFPAGQRDTPLPTVFFYHGFTSSKLVYSYFAVALAQAGFRVIMPDAPMHGARFSGDEAR-RLNHFWQILLQNMQEF 91 (249)
T ss_pred ceEEEcCCCCCCCCCCEEEEeCCCCcccchHHHHHHHHHhCCCEEEEecCCcccccCCCcccc-chhhHHHHHHHHHHHH
Confidence 335554444323345899999999999888999999998889999999999999864321110 000 0 001112333
Q ss_pred HHHHHHh---C-CC-CceEEEEecccchH-HHHHHHHhCcCccceeEEEcCCCCCCCCCchhhhhhhcccchhhhhhhHH
Q 022534 98 DKLLDVL---E-VK-YPFFLVVQGFLVGS-YGLTWALKNPSRISKLAILNSPLTASSPLPGLFQQLRIPLLGEFTAQNAI 171 (295)
Q Consensus 98 ~~~~~~l---~-~~-~~~~lv~~G~~~G~-~~~~~a~~~p~~v~~lil~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (295)
.++++.+ + ++ +.+.++ |||+|+ +++.++.++|+....++++.++... . ......+
T Consensus 92 ~~~~~~l~~~~~~~~~~i~v~--G~S~Gg~~al~~~~~~~~~~~~~~~~~~~~~~-----~-~~~~~~~----------- 152 (249)
T PRK10566 92 PTLRAAIREEGWLLDDRLAVG--GASMGGMTALGIMARHPWVKCVASLMGSGYFT-----S-LARTLFP----------- 152 (249)
T ss_pred HHHHHHHHhcCCcCccceeEE--eecccHHHHHHHHHhCCCeeEEEEeeCcHHHH-----H-HHHHhcc-----------
Confidence 3333332 1 22 235555 777765 5666777888644444444332110 0 0000000
Q ss_pred HHHHHHHhCCCccccccccccccccccccCCchhHHHHHHHhcchhhhhHhhhcCcCCCCC-CCcEEEEEeCCCCCCCcc
Q 022534 172 MAERFIEAGSPYVLKLDKADVYRLPYLASSGPGFALLEAARKVNFKDISSRIGAGFSSGSW-DKPVLVAWGISDKYLPQS 250 (295)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~P~l~i~G~~D~~~~~~ 250 (295)
.... ......... ..........+... .+ .++ ++|+|+|+|++|.+++++
T Consensus 153 -------~~~~----~~~~~~~~~---------~~~~~~~~~~~~~~---~~------~~i~~~P~Lii~G~~D~~v~~~ 203 (249)
T PRK10566 153 -------PLIP----ETAAQQAEF---------NNIVAPLAEWEVTH---QL------EQLADRPLLLWHGLADDVVPAA 203 (249)
T ss_pred -------cccc----cccccHHHH---------HHHHHHHhhcChhh---hh------hhcCCCCEEEEEcCCCCcCCHH
Confidence 0000 000000000 00011111111011 11 133 699999999999999999
Q ss_pred hHHHHHhcCCC-----CeEEEEecCCCCCCCCCChHHHHHHHHHHHHhc
Q 022534 251 VAEEFQKGNPN-----VVKLQMIEGAGHMPQEDWPEKVVDGLRYFFLNY 294 (295)
Q Consensus 251 ~~~~~~~~~~~-----~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~ 294 (295)
.+.++++.+.. .++++.++++||... + +..+.+.+||++.
T Consensus 204 ~~~~l~~~l~~~g~~~~~~~~~~~~~~H~~~---~-~~~~~~~~fl~~~ 248 (249)
T PRK10566 204 ESLRLQQALRERGLDKNLTCLWEPGVRHRIT---P-EALDAGVAFFRQH 248 (249)
T ss_pred HHHHHHHHHHhcCCCcceEEEecCCCCCccC---H-HHHHHHHHHHHhh
Confidence 88888765532 257889999999863 4 4568899998863
|
|
| >TIGR01836 PHA_synth_III_C poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit | Back alignment and domain information |
|---|
Probab=99.79 E-value=5.6e-18 Score=151.04 Aligned_cols=244 Identities=14% Similarity=0.234 Sum_probs=133.2
Q ss_pred CceEEEEcCCCCCCcc-----chhhHHHhhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCCHHHHH-----HHHHHHHHHh
Q 022534 35 LGTIVFLHGAPSHSYS-----YRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFH-----EELDKLLDVL 104 (295)
Q Consensus 35 ~~~vv~lHG~~~~~~~-----w~~~~~~l~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~-----~~l~~~~~~l 104 (295)
++|||++||+..+... |+.+++.|+++||+|+++|++|+|.|+... +.++++ ..+..+.+..
T Consensus 62 ~~pvl~v~~~~~~~~~~d~~~~~~~~~~L~~~G~~V~~~D~~g~g~s~~~~--------~~~d~~~~~~~~~v~~l~~~~ 133 (350)
T TIGR01836 62 KTPLLIVYALVNRPYMLDLQEDRSLVRGLLERGQDVYLIDWGYPDRADRYL--------TLDDYINGYIDKCVDYICRTS 133 (350)
T ss_pred CCcEEEeccccccceeccCCCCchHHHHHHHCCCeEEEEeCCCCCHHHhcC--------CHHHHHHHHHHHHHHHHHHHh
Confidence 5689999998655544 468999999889999999999999887432 344554 3344444455
Q ss_pred CCCCceEEEEecccchH-HHHHHHHhCcCccceeEEEcCCCCCCCCCch--hhhh-hh----cccchhhhhhhHHHHHHH
Q 022534 105 EVKYPFFLVVQGFLVGS-YGLTWALKNPSRISKLAILNSPLTASSPLPG--LFQQ-LR----IPLLGEFTAQNAIMAERF 176 (295)
Q Consensus 105 ~~~~~~~lv~~G~~~G~-~~~~~a~~~p~~v~~lil~~~p~~~~~~~~~--~~~~-~~----~~~~~~~~~~~~~~~~~~ 176 (295)
+.++ ++++ |||+|+ +++.+++.+|++|++++++++|......... ...+ .. ....+.+. ...+...|
T Consensus 134 ~~~~-i~lv--GhS~GG~i~~~~~~~~~~~v~~lv~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p--~~~~~~~f 208 (350)
T TIGR01836 134 KLDQ-ISLL--GICQGGTFSLCYAALYPDKIKNLVTMVTPVDFETPGNMLSNWARHVDIDLAVDTMGNIP--GELLNLTF 208 (350)
T ss_pred CCCc-ccEE--EECHHHHHHHHHHHhCchheeeEEEeccccccCCCCchhhhhccccCHHHHHHhcCCCC--HHHHHHHH
Confidence 5554 6666 777764 6777888999999999999877653221100 0000 00 00000000 00000000
Q ss_pred HHhCCCc--c-----------ccccc-cccc---cccccccCCchhHHHHHHHhc---c-hhhhhHhh-hcCcCCCCCCC
Q 022534 177 IEAGSPY--V-----------LKLDK-ADVY---RLPYLASSGPGFALLEAARKV---N-FKDISSRI-GAGFSSGSWDK 234 (295)
Q Consensus 177 ~~~~~~~--~-----------~~~~~-~~~~---~~~~~~~~~~~~~~~~~~~~~---~-~~~~~~~~-~~~~~~~~~~~ 234 (295)
.. ..|. . ..... .... ++.......++..+.+..... + +..-...+ ......+.+++
T Consensus 209 ~~-l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~d~~~~~~~~~~~~~~~~~~~n~l~~g~~~~~~~~~~l~~i~~ 287 (350)
T TIGR01836 209 LM-LKPFSLGYQKYVNLVDILEDERKVENFLRMEKWIFDSPDQAGEAFRQFVKDFYQQNGLINGEVEIGGRKVDLKNIKM 287 (350)
T ss_pred Hh-cCcchhhhHHHHHHHHhcCChHHHHHHHHHHHHhcCCcCccHHHHHHHHHHHHhcCcccCCeeEECCEEccHHhCCC
Confidence 00 0000 0 00000 0000 000000011121121111110 0 00000000 00011236789
Q ss_pred cEEEEEeCCCCCCCcchHHHHHhcCCC-CeEEEEecCCCCCCCCCC---hHHHHHHHHHHHHh
Q 022534 235 PVLVAWGISDKYLPQSVAEEFQKGNPN-VVKLQMIEGAGHMPQEDW---PEKVVDGLRYFFLN 293 (295)
Q Consensus 235 P~l~i~G~~D~~~~~~~~~~~~~~~~~-~~~~~~i~~~gH~~~~e~---p~~~~~~i~~fl~~ 293 (295)
|+++++|++|.+++++.+..+.+.++. .+++++++ +||...+.. ++++...|.+||..
T Consensus 288 Pvliv~G~~D~i~~~~~~~~~~~~~~~~~~~~~~~~-~gH~~~~~~~~~~~~v~~~i~~wl~~ 349 (350)
T TIGR01836 288 PILNIYAERDHLVPPDASKALNDLVSSEDYTELSFP-GGHIGIYVSGKAQKEVPPAIGKWLQA 349 (350)
T ss_pred CeEEEecCCCCcCCHHHHHHHHHHcCCCCeEEEEcC-CCCEEEEECchhHhhhhHHHHHHHHh
Confidence 999999999999999999999888764 35777777 799875543 58999999999975
|
This model represents the PhaC subunit of a heterodimeric form of polyhydroxyalkanoic acid (PHA) synthase. Excepting the PhaC of Bacillus megaterium (which needs PhaR), all members require PhaE (TIGR01834) for activity and are designated class III. This enzyme builds ester polymers for carbon and energy storage that accumulate in inclusions, and both this enzyme and the depolymerase associate with the inclusions. Class III enzymes polymerize short-chain-length hydroxyalkanoates. |
| >TIGR01838 PHA_synth_I poly(R)-hydroxyalkanoic acid synthase, class I | Back alignment and domain information |
|---|
Probab=99.79 E-value=1.4e-17 Score=153.62 Aligned_cols=236 Identities=14% Similarity=0.171 Sum_probs=138.6
Q ss_pred CCceEEEEcCCCCCCccch-----hhHHHhhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCC
Q 022534 34 RLGTIVFLHGAPSHSYSYR-----NVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEELDKLLDVLEVKY 108 (295)
Q Consensus 34 ~~~~vv~lHG~~~~~~~w~-----~~~~~l~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~ 108 (295)
.++|||++||+......|+ -++.+|.++||+|+++|++|+|.|++... . .+|..+.+...+..+++.++.++
T Consensus 187 ~~~PlLiVp~~i~k~yilDL~p~~Slv~~L~~qGf~V~~iDwrgpg~s~~~~~-~--ddY~~~~i~~al~~v~~~~g~~k 263 (532)
T TIGR01838 187 HKTPLLIVPPWINKYYILDLRPQNSLVRWLVEQGHTVFVISWRNPDASQADKT-F--DDYIRDGVIAALEVVEAITGEKQ 263 (532)
T ss_pred CCCcEEEECcccccceeeecccchHHHHHHHHCCcEEEEEECCCCCcccccCC-h--hhhHHHHHHHHHHHHHHhcCCCC
Confidence 3579999999998888886 68899988899999999999999986432 1 24566667788888888888775
Q ss_pred ceEEEEecccch-HHH---H-HHHHhC-cCccceeEEEcCCCCCCCCCchhhhhh----hcccchhhh------------
Q 022534 109 PFFLVVQGFLVG-SYG---L-TWALKN-PSRISKLAILNSPLTASSPLPGLFQQL----RIPLLGEFT------------ 166 (295)
Q Consensus 109 ~~~lv~~G~~~G-~~~---~-~~a~~~-p~~v~~lil~~~p~~~~~~~~~~~~~~----~~~~~~~~~------------ 166 (295)
++++ |||+| .++ + .+++.+ |++|+++++++++...... +....+ ....+....
T Consensus 264 -v~lv--G~cmGGtl~a~ala~~aa~~~~~rv~slvll~t~~Df~~~--G~l~~f~~~~~~~~~e~~~~~~G~lpg~~m~ 338 (532)
T TIGR01838 264 -VNCV--GYCIGGTLLSTALAYLAARGDDKRIKSATFFTTLLDFSDP--GELGVFVDEEIVAGIERQNGGGGYLDGRQMA 338 (532)
T ss_pred -eEEE--EECcCcHHHHHHHHHHHHhCCCCccceEEEEecCcCCCCc--chhhhhcCchhHHHHHHHHHhcCCCCHHHHH
Confidence 6666 77665 442 1 245555 7899999999887654321 111100 000000000
Q ss_pred ------hhhHHHHHHHHHhCCCccccccc--cccccccccccCCchhHHHHHHHhcchhhhhH--hhh---cCcCCCCCC
Q 022534 167 ------AQNAIMAERFIEAGSPYVLKLDK--ADVYRLPYLASSGPGFALLEAARKVNFKDISS--RIG---AGFSSGSWD 233 (295)
Q Consensus 167 ------~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~---~~~~~~~~~ 233 (295)
..+......++. .++..... .+...+......-|+....+.++..-....+. .+. ......+++
T Consensus 339 ~~F~~lrp~~l~w~~~v~---~yl~g~~~~~fdll~Wn~D~t~lP~~~~~~~lr~ly~~N~L~~G~~~v~g~~~dL~~I~ 415 (532)
T TIGR01838 339 VTFSLLRENDLIWNYYVD---NYLKGKSPVPFDLLFWNSDSTNLPGKMHNFYLRNLYLQNALTTGGLEVCGVRLDLSKVK 415 (532)
T ss_pred HHHHhcChhhHHHHHHHH---HHhcCCCccchhHHHHhccCccchHHHHHHHHHHHHhcCCCcCCeeEECCEecchhhCC
Confidence 000000011110 00010000 00000000111223333322222111010000 000 001124689
Q ss_pred CcEEEEEeCCCCCCCcchHHHHHhcCCCCeEEEEecCCCCCCCCCChH
Q 022534 234 KPVLVAWGISDKYLPQSVAEEFQKGNPNVVKLQMIEGAGHMPQEDWPE 281 (295)
Q Consensus 234 ~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~ 281 (295)
+|+|+|+|++|.+++.+.+..+.+.+++ .+.++++++||++++|+|.
T Consensus 416 vPvLvV~G~~D~IvP~~sa~~l~~~i~~-~~~~vL~~sGHi~~ienPp 462 (532)
T TIGR01838 416 VPVYIIATREDHIAPWQSAYRGAALLGG-PKTFVLGESGHIAGVVNPP 462 (532)
T ss_pred CCEEEEeeCCCCcCCHHHHHHHHHHCCC-CEEEEECCCCCchHhhCCC
Confidence 9999999999999999999999988986 6889999999999999875
|
This model represents the class I subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs with three to five carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell. |
| >PRK11071 esterase YqiA; Provisional | Back alignment and domain information |
|---|
Probab=99.78 E-value=2.8e-17 Score=133.69 Aligned_cols=183 Identities=15% Similarity=0.141 Sum_probs=119.0
Q ss_pred ceEEEEcCCCCCCccchh--hHHHhhh--CCCeEEEeCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCceE
Q 022534 36 GTIVFLHGAPSHSYSYRN--VMSQMSD--AGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEELDKLLDVLEVKYPFF 111 (295)
Q Consensus 36 ~~vv~lHG~~~~~~~w~~--~~~~l~~--~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~~ 111 (295)
|+|||+|||+++..+|+. +.+.+++ .+|+|+++|+|||| +++++++.+++++++.++ ++
T Consensus 2 p~illlHGf~ss~~~~~~~~~~~~l~~~~~~~~v~~~dl~g~~----------------~~~~~~l~~l~~~~~~~~-~~ 64 (190)
T PRK11071 2 STLLYLHGFNSSPRSAKATLLKNWLAQHHPDIEMIVPQLPPYP----------------ADAAELLESLVLEHGGDP-LG 64 (190)
T ss_pred CeEEEECCCCCCcchHHHHHHHHHHHHhCCCCeEEeCCCCCCH----------------HHHHHHHHHHHHHcCCCC-eE
Confidence 589999999999999984 3455654 26999999999984 246789999999988775 66
Q ss_pred EEEecccch-HHHHHHHHhCcCccceeEEEcCCCCCCCCCchhhhhhhcccchhhhhhhHHHHHHHHHhCCCcccccccc
Q 022534 112 LVVQGFLVG-SYGLTWALKNPSRISKLAILNSPLTASSPLPGLFQQLRIPLLGEFTAQNAIMAERFIEAGSPYVLKLDKA 190 (295)
Q Consensus 112 lv~~G~~~G-~~~~~~a~~~p~~v~~lil~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (295)
++ |+|+| .+++.+|.++|. ++++++++.. +. ... ..+...... ....
T Consensus 65 lv--G~S~Gg~~a~~~a~~~~~---~~vl~~~~~~-----~~--~~~----------------~~~~~~~~~----~~~~ 112 (190)
T PRK11071 65 LV--GSSLGGYYATWLSQCFML---PAVVVNPAVR-----PF--ELL----------------TDYLGENEN----PYTG 112 (190)
T ss_pred EE--EECHHHHHHHHHHHHcCC---CEEEECCCCC-----HH--HHH----------------HHhcCCccc----ccCC
Confidence 66 77765 568888889984 3567754332 10 000 011100000 0000
Q ss_pred ccccccccccCCchhHHHHHHHhcchhhhhHhhhcCcCCCCCCCcEEEEEeCCCCCCCcchHHHHHhcCCCCeEEEEecC
Q 022534 191 DVYRLPYLASSGPGFALLEAARKVNFKDISSRIGAGFSSGSWDKPVLVAWGISDKYLPQSVAEEFQKGNPNVVKLQMIEG 270 (295)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~ 270 (295)
..+.+ +..+....+..+. .. -+..+|+++|+|++|.++|++.+.++++. ++.++++|
T Consensus 113 ~~~~~--------~~~~~~d~~~~~~----~~-------i~~~~~v~iihg~~De~V~~~~a~~~~~~----~~~~~~~g 169 (190)
T PRK11071 113 QQYVL--------ESRHIYDLKVMQI----DP-------LESPDLIWLLQQTGDEVLDYRQAVAYYAA----CRQTVEEG 169 (190)
T ss_pred CcEEE--------cHHHHHHHHhcCC----cc-------CCChhhEEEEEeCCCCcCCHHHHHHHHHh----cceEEECC
Confidence 00000 0122222221110 00 13578999999999999999999999882 56778899
Q ss_pred CCCCCCCCChHHHHHHHHHHHH
Q 022534 271 AGHMPQEDWPEKVVDGLRYFFL 292 (295)
Q Consensus 271 ~gH~~~~e~p~~~~~~i~~fl~ 292 (295)
++|.. ...+++.+.|.+|+.
T Consensus 170 gdH~f--~~~~~~~~~i~~fl~ 189 (190)
T PRK11071 170 GNHAF--VGFERYFNQIVDFLG 189 (190)
T ss_pred CCcch--hhHHHhHHHHHHHhc
Confidence 99987 555889999999974
|
|
| >PRK07868 acyl-CoA synthetase; Validated | Back alignment and domain information |
|---|
Probab=99.74 E-value=3.7e-16 Score=156.39 Aligned_cols=248 Identities=17% Similarity=0.248 Sum_probs=139.8
Q ss_pred CCceEEEEcCCCCCCccchhh-----HHHhhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH---hC
Q 022534 34 RLGTIVFLHGAPSHSYSYRNV-----MSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEELDKLLDV---LE 105 (295)
Q Consensus 34 ~~~~vv~lHG~~~~~~~w~~~-----~~~l~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~l~~~~~~---l~ 105 (295)
..+||||+||++.++..|+.+ ++.|.++||+|+++| +|.|+++... ..+++.+++..+.+.++. +.
T Consensus 66 ~~~plllvhg~~~~~~~~d~~~~~s~v~~L~~~g~~v~~~d---~G~~~~~~~~---~~~~l~~~i~~l~~~l~~v~~~~ 139 (994)
T PRK07868 66 VGPPVLMVHPMMMSADMWDVTRDDGAVGILHRAGLDPWVID---FGSPDKVEGG---MERNLADHVVALSEAIDTVKDVT 139 (994)
T ss_pred CCCcEEEECCCCCCccceecCCcccHHHHHHHCCCEEEEEc---CCCCChhHcC---ccCCHHHHHHHHHHHHHHHHHhh
Confidence 357999999999999999976 788987899999999 5777765422 235677777667666665 23
Q ss_pred CCCceEEEEecccch-HHHHHHHHh-CcCccceeEEEcCCCCCCCCCc-hhhhh-------------hhc-ccchhhhhh
Q 022534 106 VKYPFFLVVQGFLVG-SYGLTWALK-NPSRISKLAILNSPLTASSPLP-GLFQQ-------------LRI-PLLGEFTAQ 168 (295)
Q Consensus 106 ~~~~~~lv~~G~~~G-~~~~~~a~~-~p~~v~~lil~~~p~~~~~~~~-~~~~~-------------~~~-~~~~~~~~~ 168 (295)
.+ +++++ |||+| .+++.+|+. .|++|++++++++|.+.....+ ..... ... .+-+.+...
T Consensus 140 ~~-~v~lv--G~s~GG~~a~~~aa~~~~~~v~~lvl~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~ 216 (994)
T PRK07868 140 GR-DVHLV--GYSQGGMFCYQAAAYRRSKDIASIVTFGSPVDTLAALPMGIPAGLAAAAADFMADHVFNRLDIPGWMART 216 (994)
T ss_pred CC-ceEEE--EEChhHHHHHHHHHhcCCCccceEEEEecccccCCCCcccchhhhhhcccccchhhhhhcCCCCHHHHHH
Confidence 34 46777 77665 567777764 4568999999988864321100 00000 000 000000000
Q ss_pred -----hHH-HHH---HHHHh--CCCccccccc-ccccccc-ccccCCchhHHHHHHHhcchh-hhhH-hhh-cC--cCCC
Q 022534 169 -----NAI-MAE---RFIEA--GSPYVLKLDK-ADVYRLP-YLASSGPGFALLEAARKVNFK-DISS-RIG-AG--FSSG 230 (295)
Q Consensus 169 -----~~~-~~~---~~~~~--~~~~~~~~~~-~~~~~~~-~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~-~~--~~~~ 230 (295)
+.. ... .+... ...+....+. ....+.. +. ..++....+..+..... .... .+. .+ ...+
T Consensus 217 ~~~~l~p~~~~~~~~~~~~~l~~~~~~~~~e~~~~~~~~~~w~--~~~g~~~~~~~~~~~~~n~~~~g~~~~~~~~~~L~ 294 (994)
T PRK07868 217 GFQMLDPVKTAKARVDFLRQLHDREALLPREQQRRFLESEGWI--AWSGPAISELLKQFIAHNRMMTGGFAINGQMVTLA 294 (994)
T ss_pred HHHhcChhHHHHHHHHHHHhcCchhhhccchhhHhHHHHhhcc--ccchHHHHHHHHHHHHhCcccCceEEECCEEcchh
Confidence 000 000 00100 0000000000 0000000 00 11121111111110000 0000 000 00 0134
Q ss_pred CCCCcEEEEEeCCCCCCCcchHHHHHhcCCCCeEE-EEecCCCCCCCC---CChHHHHHHHHHHHHh
Q 022534 231 SWDKPVLVAWGISDKYLPQSVAEEFQKGNPNVVKL-QMIEGAGHMPQE---DWPEKVVDGLRYFFLN 293 (295)
Q Consensus 231 ~~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~-~~i~~~gH~~~~---e~p~~~~~~i~~fl~~ 293 (295)
++++|+|+|+|++|++++++.+..+.+.+++ .++ .++++|||+.++ ..|+++.-.|.+||..
T Consensus 295 ~i~~P~L~i~G~~D~ivp~~~~~~l~~~i~~-a~~~~~~~~~GH~g~~~g~~a~~~~wp~i~~wl~~ 360 (994)
T PRK07868 295 DITCPVLAFVGEVDDIGQPASVRGIRRAAPN-AEVYESLIRAGHFGLVVGSRAAQQTWPTVADWVKW 360 (994)
T ss_pred hCCCCEEEEEeCCCCCCCHHHHHHHHHhCCC-CeEEEEeCCCCCEeeeechhhhhhhChHHHHHHHH
Confidence 7899999999999999999999999999987 677 788999999766 3688999999999975
|
|
| >KOG2564 consensus Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.71 E-value=3.1e-16 Score=129.10 Aligned_cols=107 Identities=21% Similarity=0.354 Sum_probs=81.5
Q ss_pred CCCCCCCceEEEEcCCCCCCccchhhHHHhhhC-CCeEEEeCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh--C
Q 022534 29 GSADSRLGTIVFLHGAPSHSYSYRNVMSQMSDA-GFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEELDKLLDVL--E 105 (295)
Q Consensus 29 g~~~~~~~~vv~lHG~~~~~~~w~~~~~~l~~~-~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~l~~~~~~l--~ 105 (295)
++.....|.++++||++.+.-+|-.++..|... ..+|+|+|+||||+|--... .+.+.+.+++|+-.+++.+ .
T Consensus 68 ~~~~t~gpil~l~HG~G~S~LSfA~~a~el~s~~~~r~~a~DlRgHGeTk~~~e----~dlS~eT~~KD~~~~i~~~fge 143 (343)
T KOG2564|consen 68 LPSATEGPILLLLHGGGSSALSFAIFASELKSKIRCRCLALDLRGHGETKVENE----DDLSLETMSKDFGAVIKELFGE 143 (343)
T ss_pred cCCCCCccEEEEeecCcccchhHHHHHHHHHhhcceeEEEeeccccCccccCCh----hhcCHHHHHHHHHHHHHHHhcc
Confidence 443344578999999999999999999998743 67899999999999976432 2568899999999999986 2
Q ss_pred CCCceEEEEecccc-hHHHHHHHH--hCcCccceeEEEcC
Q 022534 106 VKYPFFLVVQGFLV-GSYGLTWAL--KNPSRISKLAILNS 142 (295)
Q Consensus 106 ~~~~~~lv~~G~~~-G~~~~~~a~--~~p~~v~~lil~~~ 142 (295)
...+++|| |||+ |+++...|. .-|. +.+|++++.
T Consensus 144 ~~~~iilV--GHSmGGaIav~~a~~k~lps-l~Gl~viDV 180 (343)
T KOG2564|consen 144 LPPQIILV--GHSMGGAIAVHTAASKTLPS-LAGLVVIDV 180 (343)
T ss_pred CCCceEEE--eccccchhhhhhhhhhhchh-hhceEEEEE
Confidence 33457777 6765 578766554 4676 788988763
|
|
| >KOG2931 consensus Differentiation-related gene 1 protein (NDR1 protein), related proteins [Function unknown] | Back alignment and domain information |
|---|
Probab=99.70 E-value=5.5e-15 Score=122.73 Aligned_cols=258 Identities=20% Similarity=0.257 Sum_probs=152.0
Q ss_pred CcEEEEEEEcCCCCCCCceEEEEcCCCCCCcc-chh-----hHHHhhhCCCeEEEeCCCCCCCCCCCCCCCCCCCC-CHH
Q 022534 19 GEYRWFVRETGSADSRLGTIVFLHGAPSHSYS-YRN-----VMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDF-TEN 91 (295)
Q Consensus 19 ~~~~~~~~~~g~~~~~~~~vv~lHG~~~~~~~-w~~-----~~~~l~~~~~~via~Dl~G~G~S~~~~~~~~~~~~-~~~ 91 (295)
.-..+|+...|+++..+|.+|=.|+.+.++.+ |.. .+..+.+ +|-|+-+|-|||-.-...-+ .+|.| |++
T Consensus 30 ~~G~v~V~V~Gd~~~~kpaiiTyhDlglN~~scFq~ff~~p~m~ei~~-~fcv~HV~~PGqe~gAp~~p--~~y~yPsmd 106 (326)
T KOG2931|consen 30 AHGVVHVTVYGDPKGNKPAIITYHDLGLNHKSCFQGFFNFPDMAEILE-HFCVYHVDAPGQEDGAPSFP--EGYPYPSMD 106 (326)
T ss_pred ccccEEEEEecCCCCCCceEEEecccccchHhHhHHhhcCHhHHHHHh-heEEEecCCCccccCCccCC--CCCCCCCHH
Confidence 33567777789877667888889999988876 543 3344555 59999999999976543222 24445 899
Q ss_pred HHHHHHHHHHHHhCCCCceEEEEecccchHHH-HHHHHhCcCccceeEEEcCCCCCCCCCchhhh-hhhcccchhh-hhh
Q 022534 92 EFHEELDKLLDVLEVKYPFFLVVQGFLVGSYG-LTWALKNPSRISKLAILNSPLTASSPLPGLFQ-QLRIPLLGEF-TAQ 168 (295)
Q Consensus 92 ~~~~~l~~~~~~l~~~~~~~lv~~G~~~G~~~-~~~a~~~p~~v~~lil~~~p~~~~~~~~~~~~-~~~~~~~~~~-~~~ 168 (295)
+++++|..++++++++. + ||.|-..|++. ..+|+.||++|-+|||+++-..... |.+++. ++...++... ..+
T Consensus 107 ~LAd~l~~VL~~f~lk~-v--Ig~GvGAGAyIL~rFAl~hp~rV~GLvLIn~~~~a~g-wiew~~~K~~s~~l~~~Gmt~ 182 (326)
T KOG2931|consen 107 DLADMLPEVLDHFGLKS-V--IGMGVGAGAYILARFALNHPERVLGLVLINCDPCAKG-WIEWAYNKVSSNLLYYYGMTQ 182 (326)
T ss_pred HHHHHHHHHHHhcCcce-E--EEecccccHHHHHHHHhcChhheeEEEEEecCCCCch-HHHHHHHHHHHHHHHhhchhh
Confidence 99999999999999985 3 33354346543 5789999999999999986444332 222211 1110000000 000
Q ss_pred --hHHHHHHHHHhCCCccccccccc---cccccccccCCchh-H-HHHHHHhcchhhhhHhhhcCcCCCCCCCcEEEEEe
Q 022534 169 --NAIMAERFIEAGSPYVLKLDKAD---VYRLPYLASSGPGF-A-LLEAARKVNFKDISSRIGAGFSSGSWDKPVLVAWG 241 (295)
Q Consensus 169 --~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G 241 (295)
...+....+.. ..... +.+ .||..+....++.. . +.++.. ..+|+..... ....+++||+|++.|
T Consensus 183 ~~~d~ll~H~Fg~---e~~~~-~~diVq~Yr~~l~~~~N~~Nl~~fl~ayn--~R~DL~~~r~--~~~~tlkc~vllvvG 254 (326)
T KOG2931|consen 183 GVKDYLLAHHFGK---EELGN-NSDIVQEYRQHLGERLNPKNLALFLNAYN--GRRDLSIERP--KLGTTLKCPVLLVVG 254 (326)
T ss_pred hHHHHHHHHHhcc---ccccc-cHHHHHHHHHHHHhcCChhHHHHHHHHhc--CCCCccccCC--CcCccccccEEEEec
Confidence 01111111110 01111 111 12221222222211 1 122211 0112111110 001156799999999
Q ss_pred CCCCCCCcchHHHHH-hcCCCCeEEEEecCCCCCCCCCChHHHHHHHHHHHHh
Q 022534 242 ISDKYLPQSVAEEFQ-KGNPNVVKLQMIEGAGHMPQEDWPEKVVDGLRYFFLN 293 (295)
Q Consensus 242 ~~D~~~~~~~~~~~~-~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 293 (295)
++.+... ...++. +..|..+++..+.+||=.+++|||+.+.+.++-|+.+
T Consensus 255 d~Sp~~~--~vv~~n~~Ldp~~ttllk~~d~g~l~~e~qP~kl~ea~~~FlqG 305 (326)
T KOG2931|consen 255 DNSPHVS--AVVECNSKLDPTYTTLLKMADCGGLVQEEQPGKLAEAFKYFLQG 305 (326)
T ss_pred CCCchhh--hhhhhhcccCcccceEEEEcccCCcccccCchHHHHHHHHHHcc
Confidence 9998654 344554 4456667999999999999999999999999999976
|
|
| >PF03096 Ndr: Ndr family; InterPro: IPR004142 This family consists of proteins from different gene families: Ndr1/RTP/Drg1, Ndr2, and Ndr3 | Back alignment and domain information |
|---|
Probab=99.69 E-value=9.3e-16 Score=128.91 Aligned_cols=258 Identities=19% Similarity=0.252 Sum_probs=133.4
Q ss_pred EEeCcEEEEEEEcCCCCCCCceEEEEcCCCCCCcc-chhh-----HHHhhhCCCeEEEeCCCCCCCCCCCCCCCCCCCC-
Q 022534 16 IKSGEYRWFVRETGSADSRLGTIVFLHGAPSHSYS-YRNV-----MSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDF- 88 (295)
Q Consensus 16 ~~~~~~~~~~~~~g~~~~~~~~vv~lHG~~~~~~~-w~~~-----~~~l~~~~~~via~Dl~G~G~S~~~~~~~~~~~~- 88 (295)
++..-..+++...|+++..+|++|=.|..+.++.+ |..+ +..+.+ .|-++-+|-|||..-..+-+. +|.|
T Consensus 4 v~t~~G~v~V~v~G~~~~~kp~ilT~HDvGlNh~scF~~ff~~~~m~~i~~-~f~i~Hi~aPGqe~ga~~~p~--~y~yP 80 (283)
T PF03096_consen 4 VETPYGSVHVTVQGDPKGNKPAILTYHDVGLNHKSCFQGFFNFEDMQEILQ-NFCIYHIDAPGQEEGAATLPE--GYQYP 80 (283)
T ss_dssp EEETTEEEEEEEESS--TTS-EEEEE--TT--HHHHCHHHHCSHHHHHHHT-TSEEEEEE-TTTSTT-----T--T----
T ss_pred eccCceEEEEEEEecCCCCCceEEEeccccccchHHHHHHhcchhHHHHhh-ceEEEEEeCCCCCCCcccccc--ccccc
Confidence 55666778888889877668999999999988876 6543 344554 799999999999975543332 4455
Q ss_pred CHHHHHHHHHHHHHHhCCCCceEEEEecccchHH-HHHHHHhCcCccceeEEEcCCCCCCCCCchhhh-hhhcccchh--
Q 022534 89 TENEFHEELDKLLDVLEVKYPFFLVVQGFLVGSY-GLTWALKNPSRISKLAILNSPLTASSPLPGLFQ-QLRIPLLGE-- 164 (295)
Q Consensus 89 ~~~~~~~~l~~~~~~l~~~~~~~lv~~G~~~G~~-~~~~a~~~p~~v~~lil~~~p~~~~~~~~~~~~-~~~~~~~~~-- 164 (295)
|+++++++|.+++++++++. ++-+ |-..|+. =..+|+++|++|.++||+++...... |.+++. ++....+..
T Consensus 81 smd~LAe~l~~Vl~~f~lk~-vIg~--GvGAGAnIL~rfAl~~p~~V~GLiLvn~~~~~~g-w~Ew~~~K~~~~~L~~~g 156 (283)
T PF03096_consen 81 SMDQLAEMLPEVLDHFGLKS-VIGF--GVGAGANILARFALKHPERVLGLILVNPTCTAAG-WMEWFYQKLSSWLLYSYG 156 (283)
T ss_dssp -HHHHHCTHHHHHHHHT----EEEE--EETHHHHHHHHHHHHSGGGEEEEEEES---S----HHHHHHHHHH-------C
T ss_pred CHHHHHHHHHHHHHhCCccE-EEEE--eeccchhhhhhccccCccceeEEEEEecCCCCcc-HHHHHHHHHhcccccccc
Confidence 89999999999999999986 5444 4324554 35789999999999999976444332 222221 111000000
Q ss_pred hh-hhhHHHHHHHHHhCCCccccccccc---cccccccccCCchh--HHHHHHHhcchhhhhHhhhcCcCCCCCCCcEEE
Q 022534 165 FT-AQNAIMAERFIEAGSPYVLKLDKAD---VYRLPYLASSGPGF--ALLEAARKVNFKDISSRIGAGFSSGSWDKPVLV 238 (295)
Q Consensus 165 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~ 238 (295)
.. .....+...++.. .......+ .++.......++.. .+.+.... .++ +.. ..+...||+|+
T Consensus 157 mt~~~~d~Ll~h~Fg~----~~~~~n~Dlv~~yr~~l~~~~Np~Nl~~f~~sy~~--R~D----L~~--~~~~~~c~vLl 224 (283)
T PF03096_consen 157 MTSSVKDYLLWHYFGK----EEEENNSDLVQTYRQHLDERINPKNLALFLNSYNS--RTD----LSI--ERPSLGCPVLL 224 (283)
T ss_dssp TTS-HHHHHHHHHS-H----HHHHCT-HHHHHHHHHHHT-TTHHHHHHHHHHHHT-----------S--ECTTCCS-EEE
T ss_pred cccchHHhhhhccccc----ccccccHHHHHHHHHHHhcCCCHHHHHHHHHHHhc--ccc----chh--hcCCCCCCeEE
Confidence 00 0000011111110 00000111 11111111111111 11111110 011 111 12355799999
Q ss_pred EEeCCCCCCCcchHHHHH-hcCCCCeEEEEecCCCCCCCCCChHHHHHHHHHHHHhc
Q 022534 239 AWGISDKYLPQSVAEEFQ-KGNPNVVKLQMIEGAGHMPQEDWPEKVVDGLRYFFLNY 294 (295)
Q Consensus 239 i~G~~D~~~~~~~~~~~~-~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~ 294 (295)
+.|++.+... .+.++. +..|...++..+++||=++++|+|+.+++.++-|+.++
T Consensus 225 vvG~~Sp~~~--~vv~~ns~Ldp~~ttllkv~dcGglV~eEqP~klaea~~lFlQG~ 279 (283)
T PF03096_consen 225 VVGDNSPHVD--DVVEMNSKLDPTKTTLLKVADCGGLVLEEQPGKLAEAFKLFLQGM 279 (283)
T ss_dssp EEETTSTTHH--HHHHHHHHS-CCCEEEEEETT-TT-HHHH-HHHHHHHHHHHHHHT
T ss_pred EEecCCcchh--hHHHHHhhcCcccceEEEecccCCcccccCcHHHHHHHHHHHccC
Confidence 9999998643 445565 45666789999999999999999999999999999873
|
Their similarity was previously noted []. The precise molecular and cellular function of members of this family is still unknown, yet they are known to be involved in cellular differentiation events. The Ndr1 group was the first to be discovered. Their expression is repressed by the proto-oncogenes N-myc and c-myc, and in line with this observation, Ndr1 protein expression is down-regulated in neoplastic cells, and is reactivated when differentiation is induced by chemicals such as retinoic acid. Ndr2 and Ndr3 expression is not under the control of N-myc or c-myc. Ndr1 expression is also activated by several chemicals: tunicamycin and homocysteine induce Ndr1 in human umbilical endothelial cells; nickel induces Ndr1 in several cell types. Members of this family are found in wide variety of multicellular eukaryotes, including an Ndr1 type protein in Helianthus annuus (Common sunflower), known as Sf21. Interestingly, the highest scoring matches in the noise are all alpha/beta hydrolases (IPR000073 from INTERPRO), suggesting that this family may have an enzymatic function.; PDB: 2QMQ_A 2XMR_B 2XMQ_B 2XMS_A. |
| >PF06342 DUF1057: Alpha/beta hydrolase of unknown function (DUF1057); InterPro: IPR010463 This entry consists of proteins of unknown function which have an alpha/beta hydrolase fold | Back alignment and domain information |
|---|
Probab=99.69 E-value=4.4e-15 Score=123.46 Aligned_cols=254 Identities=21% Similarity=0.357 Sum_probs=153.6
Q ss_pred ccceeeEEeCcEEEEEEEcCCCCCCCceEEEEcCCCCCCccchhhHHHhhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCC
Q 022534 10 REYGSYIKSGEYRWFVRETGSADSRLGTIVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFT 89 (295)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~vv~lHG~~~~~~~w~~~~~~l~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~ 89 (295)
.+.|..++. .--|++..+..++.++||=+||-|+|+..|+.+.+.|.+.|.|+|-+.+||+|.|.++. +..|+
T Consensus 13 ~~~~~~~~~---~a~y~D~~~~gs~~gTVv~~hGsPGSH~DFkYi~~~l~~~~iR~I~iN~PGf~~t~~~~----~~~~~ 85 (297)
T PF06342_consen 13 AENGKIVTV---QAVYEDSLPSGSPLGTVVAFHGSPGSHNDFKYIRPPLDEAGIRFIGINYPGFGFTPGYP----DQQYT 85 (297)
T ss_pred cccCceEEE---EEEEEecCCCCCCceeEEEecCCCCCccchhhhhhHHHHcCeEEEEeCCCCCCCCCCCc----ccccC
Confidence 344444443 33456665544456799999999999999999999999999999999999999999754 34677
Q ss_pred HHHHHHHHHHHHHHhCCCCceEEEEecccchH-HHHHHHHhCcCccceeEEEcCCCCCCCCCchhhhhhhcccchhhhhh
Q 022534 90 ENEFHEELDKLLDVLEVKYPFFLVVQGFLVGS-YGLTWALKNPSRISKLAILNSPLTASSPLPGLFQQLRIPLLGEFTAQ 168 (295)
Q Consensus 90 ~~~~~~~l~~~~~~l~~~~~~~lv~~G~~~G~-~~~~~a~~~p~~v~~lil~~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (295)
-.+-.+-+..+++.+++++.++.+ |||.|+ -|+.+|..+| +.++++++++-......-.-+.+ ...+..+..
T Consensus 86 n~er~~~~~~ll~~l~i~~~~i~~--gHSrGcenal~la~~~~--~~g~~lin~~G~r~HkgIrp~~r--~~~i~~l~~- 158 (297)
T PF06342_consen 86 NEERQNFVNALLDELGIKGKLIFL--GHSRGCENALQLAVTHP--LHGLVLINPPGLRPHKGIRPLSR--METINYLYD- 158 (297)
T ss_pred hHHHHHHHHHHHHHcCCCCceEEE--EeccchHHHHHHHhcCc--cceEEEecCCccccccCcCHHHH--HHHHHHHHH-
Confidence 788999999999999998776666 778775 6788888886 56999998766544321110111 111100000
Q ss_pred hHHHHHHHHHhCCCccccccccccccc-cccccCCchhHHHHHH---HhcchhhhhHhhhcCcCCCCCCCcEEEEEeCCC
Q 022534 169 NAIMAERFIEAGSPYVLKLDKADVYRL-PYLASSGPGFALLEAA---RKVNFKDISSRIGAGFSSGSWDKPVLVAWGISD 244 (295)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D 244 (295)
+..+++... ++ ...++. .+..+ .|.....++ ..+++......+.. .++-++|+++++|.+|
T Consensus 159 ---~lp~~~~~~---i~----~~~y~~iG~KV~--~GeeA~na~r~m~~~df~~q~~~I~~---ln~~~ikvli~ygg~D 223 (297)
T PF06342_consen 159 ---LLPRFIINA---IM----YFYYRMIGFKVS--DGEEAINAMRSMQNCDFEEQKEYIDK---LNKKPIKVLIAYGGKD 223 (297)
T ss_pred ---HhhHHHHHH---HH----HHHHHHhCeeec--ChHHHHHHHHHHHhcCHHHHHHHHHH---hccCCCcEEEEEcCcc
Confidence 000011000 00 000000 00001 112222222 22333333332221 1133599999999999
Q ss_pred CCCCcchHHHHHhcCCC--------------------------CeEEEEecCCCCCCCCCChHHHHHHHHHHHH
Q 022534 245 KYLPQSVAEEFQKGNPN--------------------------VVKLQMIEGAGHMPQEDWPEKVVDGLRYFFL 292 (295)
Q Consensus 245 ~~~~~~~~~~~~~~~~~--------------------------~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~ 292 (295)
.++..+...++++.... .-..+.+.+-||+.+-.+++-+++++.+.|+
T Consensus 224 hLIEeeI~~E~a~~f~~l~Hf~~~~~~seee~~kI~~~f~~~~~~~sv~f~~dgHf~qK~~A~lIA~~i~~mfe 297 (297)
T PF06342_consen 224 HLIEEEISFEFAMKFKGLDHFNIEKEISEEEKPKILKSFASGQKGASVFFAKDGHFQQKFRADLIAEAIKKMFE 297 (297)
T ss_pred hhhHHHHHHHHHHHhCCccceeeecCCChhHHHHHHHHHhcCCceeEEEEecCChHHhHHHHHHHHHHHHHhhC
Confidence 99876666554332211 1234667777888888888888888877653
|
|
| >PF12146 Hydrolase_4: Putative lysophospholipase; InterPro: IPR022742 This domain is found in bacteria and eukaryotes and is approximately 110 amino acids in length | Back alignment and domain information |
|---|
Probab=99.67 E-value=2.1e-16 Score=108.98 Aligned_cols=79 Identities=20% Similarity=0.378 Sum_probs=67.7
Q ss_pred cEEEEEEEcCCCCCCCceEEEEcCCCCCCccchhhHHHhhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH
Q 022534 20 EYRWFVRETGSADSRLGTIVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEELDK 99 (295)
Q Consensus 20 ~~~~~~~~~g~~~~~~~~vv~lHG~~~~~~~w~~~~~~l~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~l~~ 99 (295)
|++++++.+-+.++++++|+++||+++++..|.++++.|++.||.|+++|+||||+|+..+... -+.+++++|+..
T Consensus 1 G~~L~~~~w~p~~~~k~~v~i~HG~~eh~~ry~~~a~~L~~~G~~V~~~D~rGhG~S~g~rg~~----~~~~~~v~D~~~ 76 (79)
T PF12146_consen 1 GTKLFYRRWKPENPPKAVVVIVHGFGEHSGRYAHLAEFLAEQGYAVFAYDHRGHGRSEGKRGHI----DSFDDYVDDLHQ 76 (79)
T ss_pred CcEEEEEEecCCCCCCEEEEEeCCcHHHHHHHHHHHHHHHhCCCEEEEECCCcCCCCCCccccc----CCHHHHHHHHHH
Confidence 5788999998766567899999999999999999999999999999999999999999754332 256789999988
Q ss_pred HHH
Q 022534 100 LLD 102 (295)
Q Consensus 100 ~~~ 102 (295)
+++
T Consensus 77 ~~~ 79 (79)
T PF12146_consen 77 FIQ 79 (79)
T ss_pred HhC
Confidence 864
|
Many members are annotated as being lysophospholipases, and others as alpha-beta hydrolase fold-containing proteins. |
| >TIGR03101 hydr2_PEP hydrolase, ortholog 2, exosortase system type 1 associated | Back alignment and domain information |
|---|
Probab=99.66 E-value=1.5e-15 Score=129.16 Aligned_cols=121 Identities=15% Similarity=0.145 Sum_probs=83.6
Q ss_pred eeEEeCcEEEEEEEcCC-CCCCCceEEEEcCCCCCC----ccchhhHHHhhhCCCeEEEeCCCCCCCCCCCCCCCCCCCC
Q 022534 14 SYIKSGEYRWFVRETGS-ADSRLGTIVFLHGAPSHS----YSYRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDF 88 (295)
Q Consensus 14 ~~~~~~~~~~~~~~~g~-~~~~~~~vv~lHG~~~~~----~~w~~~~~~l~~~~~~via~Dl~G~G~S~~~~~~~~~~~~ 88 (295)
.|++.....++.....+ +++++++|||+||++++. ..|..+++.|++.||+|+++|+||||.|+.... .+
T Consensus 3 ~~l~~~~g~~~~~~~~p~~~~~~~~VlllHG~g~~~~~~~~~~~~la~~La~~Gy~Vl~~Dl~G~G~S~g~~~-----~~ 77 (266)
T TIGR03101 3 FFLDAPHGFRFCLYHPPVAVGPRGVVIYLPPFAEEMNKSRRMVALQARAFAAGGFGVLQIDLYGCGDSAGDFA-----AA 77 (266)
T ss_pred EEecCCCCcEEEEEecCCCCCCceEEEEECCCcccccchhHHHHHHHHHHHHCCCEEEEECCCCCCCCCCccc-----cC
Confidence 45555433333322222 223357899999998643 457778899988899999999999999986432 12
Q ss_pred CHHHHHHHHHHHHH---HhCCCCceEEEEecccchH-HHHHHHHhCcCccceeEEEcC
Q 022534 89 TENEFHEELDKLLD---VLEVKYPFFLVVQGFLVGS-YGLTWALKNPSRISKLAILNS 142 (295)
Q Consensus 89 ~~~~~~~~l~~~~~---~l~~~~~~~lv~~G~~~G~-~~~~~a~~~p~~v~~lil~~~ 142 (295)
+.+.+.+|+..+++ +.+.+ +++++ |+|+|+ +++.+|.++|++++++|++++
T Consensus 78 ~~~~~~~Dv~~ai~~L~~~~~~-~v~Lv--G~SmGG~vAl~~A~~~p~~v~~lVL~~P 132 (266)
T TIGR03101 78 RWDVWKEDVAAAYRWLIEQGHP-PVTLW--GLRLGALLALDAANPLAAKCNRLVLWQP 132 (266)
T ss_pred CHHHHHHHHHHHHHHHHhcCCC-CEEEE--EECHHHHHHHHHHHhCccccceEEEecc
Confidence 45667777766544 44444 56776 777765 677788899999999999853
|
This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 1, TIGR03100) of the same superfamily. |
| >PF12695 Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3D0K_B 2I3D_B 3DOH_B 3DOI_B 3PFB_A 3S2Z_B 3PFC_A 3QM1_A 3PF8_B 3PF9_A | Back alignment and domain information |
|---|
Probab=99.64 E-value=5e-15 Score=114.81 Aligned_cols=144 Identities=25% Similarity=0.424 Sum_probs=102.8
Q ss_pred eEEEEcCCCCCCccchhhHHHhhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCceEEEEec
Q 022534 37 TIVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEELDKLLDVLEVKYPFFLVVQG 116 (295)
Q Consensus 37 ~vv~lHG~~~~~~~w~~~~~~l~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~~lv~~G 116 (295)
+||++||++++...|..+++.|++.||.|+.+|+||+|.+... ++..+.++.+.+.....+++.++ |
T Consensus 1 ~vv~~HG~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~i~l~--G 67 (145)
T PF12695_consen 1 VVVLLHGWGGSRRDYQPLAEALAEQGYAVVAFDYPGHGDSDGA-----------DAVERVLADIRAGYPDPDRIILI--G 67 (145)
T ss_dssp EEEEECTTTTTTHHHHHHHHHHHHTTEEEEEESCTTSTTSHHS-----------HHHHHHHHHHHHHHCTCCEEEEE--E
T ss_pred CEEEECCCCCCHHHHHHHHHHHHHCCCEEEEEecCCCCccchh-----------HHHHHHHHHHHhhcCCCCcEEEE--E
Confidence 5899999999999999999999999999999999999998421 12222222222222222346666 7
Q ss_pred ccchH-HHHHHHHhCcCccceeEEEcCCCCCCCCCchhhhhhhcccchhhhhhhHHHHHHHHHhCCCccccccccccccc
Q 022534 117 FLVGS-YGLTWALKNPSRISKLAILNSPLTASSPLPGLFQQLRIPLLGEFTAQNAIMAERFIEAGSPYVLKLDKADVYRL 195 (295)
Q Consensus 117 ~~~G~-~~~~~a~~~p~~v~~lil~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (295)
||+|+ ++..++.+. .++++++++++ + +.. +.
T Consensus 68 ~S~Gg~~a~~~~~~~-~~v~~~v~~~~-~------~~~--------------------~~-------------------- 99 (145)
T PF12695_consen 68 HSMGGAIAANLAARN-PRVKAVVLLSP-Y------PDS--------------------ED-------------------- 99 (145)
T ss_dssp ETHHHHHHHHHHHHS-TTESEEEEESE-S------SGC--------------------HH--------------------
T ss_pred EccCcHHHHHHhhhc-cceeEEEEecC-c------cch--------------------hh--------------------
Confidence 77765 566666777 78999998853 1 000 00
Q ss_pred cccccCCchhHHHHHHHhcchhhhhHhhhcCcCCCCCCCcEEEEEeCCCCCCCcchHHHHHhcCCCCeEEEEecCCCCC
Q 022534 196 PYLASSGPGFALLEAARKVNFKDISSRIGAGFSSGSWDKPVLVAWGISDKYLPQSVAEEFQKGNPNVVKLQMIEGAGHM 274 (295)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~ 274 (295)
+ .+.++|+++++|++|..++++..+++.+.++...+++++++++|+
T Consensus 100 -----------~----------------------~~~~~pv~~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~i~g~~H~ 145 (145)
T PF12695_consen 100 -----------L----------------------AKIRIPVLFIHGENDPLVPPEQVRRLYEALPGPKELYIIPGAGHF 145 (145)
T ss_dssp -----------H----------------------TTTTSEEEEEEETT-SSSHHHHHHHHHHHHCSSEEEEEETTS-TT
T ss_pred -----------h----------------------hccCCcEEEEEECCCCcCCHHHHHHHHHHcCCCcEEEEeCCCcCc
Confidence 0 023579999999999999998889988877766899999999995
|
... |
| >KOG1552 consensus Predicted alpha/beta hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.61 E-value=2.2e-14 Score=117.78 Aligned_cols=192 Identities=18% Similarity=0.299 Sum_probs=124.0
Q ss_pred CCCCCCCceEEEEcCCCCCCccchhhHHHhhh-CCCeEEEeCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH----H
Q 022534 29 GSADSRLGTIVFLHGAPSHSYSYRNVMSQMSD-AGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEELDKLLD----V 103 (295)
Q Consensus 29 g~~~~~~~~vv~lHG~~~~~~~w~~~~~~l~~-~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~l~~~~~----~ 103 (295)
.++....+++++.||...+...-..+.-.|.. -+++++.+|..|+|.|.+..... ....|+.++-+ .
T Consensus 54 ~~~~~~~~~lly~hGNa~Dlgq~~~~~~~l~~~ln~nv~~~DYSGyG~S~G~psE~--------n~y~Di~avye~Lr~~ 125 (258)
T KOG1552|consen 54 RPPEAAHPTLLYSHGNAADLGQMVELFKELSIFLNCNVVSYDYSGYGRSSGKPSER--------NLYADIKAVYEWLRNR 125 (258)
T ss_pred cCccccceEEEEcCCcccchHHHHHHHHHHhhcccceEEEEecccccccCCCcccc--------cchhhHHHHHHHHHhh
Confidence 33444458999999997666643333344433 27899999999999999865332 22334444333 3
Q ss_pred hCCCCceEEEEecccchHH-HHHHHHhCcCccceeEEEcCCCCCCCCCchhhhhhhcccchhhhhhhHHHHHHHHHhCCC
Q 022534 104 LEVKYPFFLVVQGFLVGSY-GLTWALKNPSRISKLAILNSPLTASSPLPGLFQQLRIPLLGEFTAQNAIMAERFIEAGSP 182 (295)
Q Consensus 104 l~~~~~~~lv~~G~~~G~~-~~~~a~~~p~~v~~lil~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (295)
.|-+..++|. |+|+|+. .+.+|.++| ++++||. +|..... + .+-....
T Consensus 126 ~g~~~~Iil~--G~SiGt~~tv~Lasr~~--~~alVL~-SPf~S~~---------r-----------------v~~~~~~ 174 (258)
T KOG1552|consen 126 YGSPERIILY--GQSIGTVPTVDLASRYP--LAAVVLH-SPFTSGM---------R-----------------VAFPDTK 174 (258)
T ss_pred cCCCceEEEE--EecCCchhhhhHhhcCC--cceEEEe-ccchhhh---------h-----------------hhccCcc
Confidence 3423456666 7788865 467889998 8888877 4553210 0 0000000
Q ss_pred ccccccccccccccccccCCchhHHHHHHHhcchhhhhHhhhcCcCCCCCCCcEEEEEeCCCCCCCcchHHHHHhcCCCC
Q 022534 183 YVLKLDKADVYRLPYLASSGPGFALLEAARKVNFKDISSRIGAGFSSGSWDKPVLVAWGISDKYLPQSVAEEFQKGNPNV 262 (295)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~ 262 (295)
.. +.. +. +. ..+++ +.++||+|++||++|.+++......+.+..++.
T Consensus 175 -------~~-~~~-------------d~-----f~-~i~kI------~~i~~PVLiiHgtdDevv~~sHg~~Lye~~k~~ 221 (258)
T KOG1552|consen 175 -------TT-YCF-------------DA-----FP-NIEKI------SKITCPVLIIHGTDDEVVDFSHGKALYERCKEK 221 (258)
T ss_pred -------eE-Eee-------------cc-----cc-ccCcc------eeccCCEEEEecccCceecccccHHHHHhcccc
Confidence 00 000 00 00 01122 267899999999999999999999999998875
Q ss_pred eEEEEecCCCCCCCCCChHHHHHHHHHHHHh
Q 022534 263 VKLQMIEGAGHMPQEDWPEKVVDGLRYFFLN 293 (295)
Q Consensus 263 ~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 293 (295)
.+-.++.|+||.- +|...++.+.++.|+..
T Consensus 222 ~epl~v~g~gH~~-~~~~~~yi~~l~~f~~~ 251 (258)
T KOG1552|consen 222 VEPLWVKGAGHND-IELYPEYIEHLRRFISS 251 (258)
T ss_pred CCCcEEecCCCcc-cccCHHHHHHHHHHHHH
Confidence 6889999999984 56666677888888864
|
|
| >KOG2565 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.56 E-value=3.8e-14 Score=121.06 Aligned_cols=122 Identities=23% Similarity=0.360 Sum_probs=94.0
Q ss_pred eEEeCcEEEEEEEcCCCCCC----CceEEEEcCCCCCCccchhhHHHhhhC---------CCeEEEeCCCCCCCCCCCCC
Q 022534 15 YIKSGEYRWFVRETGSADSR----LGTIVFLHGAPSHSYSYRNVMSQMSDA---------GFHCFAPDWLGFGFSDKPEK 81 (295)
Q Consensus 15 ~~~~~~~~~~~~~~g~~~~~----~~~vv~lHG~~~~~~~w~~~~~~l~~~---------~~~via~Dl~G~G~S~~~~~ 81 (295)
..+..|.+||+-..-+++.+ --|+|++|||+++.+.|..+++.|..- -|.||+|.+||||.|+++..
T Consensus 128 kTeIeGL~iHFlhvk~p~~k~~k~v~PlLl~HGwPGsv~EFykfIPlLT~p~~hg~~~d~~FEVI~PSlPGygwSd~~sk 207 (469)
T KOG2565|consen 128 KTEIEGLKIHFLHVKPPQKKKKKKVKPLLLLHGWPGSVREFYKFIPLLTDPKRHGNESDYAFEVIAPSLPGYGWSDAPSK 207 (469)
T ss_pred hhhhcceeEEEEEecCCccccCCcccceEEecCCCchHHHHHhhhhhhcCccccCCccceeEEEeccCCCCcccCcCCcc
Confidence 34568999998665443211 248999999999999999999988632 38899999999999998753
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHhCCCCceEEEEecccchHH-HHHHHHhCcCccceeEEEcCC
Q 022534 82 GYDDFDFTENEFHEELDKLLDVLEVKYPFFLVVQGFLVGSY-GLTWALKNPSRISKLAILNSP 143 (295)
Q Consensus 82 ~~~~~~~~~~~~~~~l~~~~~~l~~~~~~~lv~~G~~~G~~-~~~~a~~~p~~v~~lil~~~p 143 (295)
. .+.....+..+..++=++|.++ +++ +|..+||+ |..+|..||++|.++-+..|+
T Consensus 208 ~----GFn~~a~ArvmrkLMlRLg~nk-ffi--qGgDwGSiI~snlasLyPenV~GlHlnm~~ 263 (469)
T KOG2565|consen 208 T----GFNAAATARVMRKLMLRLGYNK-FFI--QGGDWGSIIGSNLASLYPENVLGLHLNMCF 263 (469)
T ss_pred C----CccHHHHHHHHHHHHHHhCcce-eEe--ecCchHHHHHHHHHhhcchhhhHhhhcccc
Confidence 2 2355678889999999999986 555 35468884 778888999999999865443
|
|
| >PRK11460 putative hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=99.56 E-value=1.1e-13 Score=116.12 Aligned_cols=179 Identities=16% Similarity=0.130 Sum_probs=108.4
Q ss_pred CCCceEEEEcCCCCCCccchhhHHHhhhCCCeEEEeCCCCCCCCCCCC-CCCC-----CCCCCH---HHHH----HHHHH
Q 022534 33 SRLGTIVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGFGFSDKPE-KGYD-----DFDFTE---NEFH----EELDK 99 (295)
Q Consensus 33 ~~~~~vv~lHG~~~~~~~w~~~~~~l~~~~~~via~Dl~G~G~S~~~~-~~~~-----~~~~~~---~~~~----~~l~~ 99 (295)
++++.|||+||++++...|..+++.|...++.+..++.+|...+.... ..+. ...... .... +.+..
T Consensus 14 ~~~~~vIlLHG~G~~~~~~~~l~~~l~~~~~~~~~i~~~g~~~~~~~~g~~W~~~~~~~~~~~~~~~~~~~~~l~~~i~~ 93 (232)
T PRK11460 14 PAQQLLLLFHGVGDNPVAMGEIGSWFAPAFPDALVVSVGGPEPSGNGAGRQWFSVQGITEDNRQARVAAIMPTFIETVRY 93 (232)
T ss_pred CCCcEEEEEeCCCCChHHHHHHHHHHHHHCCCCEEECCCCCCCcCCCCCcccccCCCCCccchHHHHHHHHHHHHHHHHH
Confidence 346789999999999999999999998655556666666664332110 0000 000111 1222 22333
Q ss_pred HHHHhCCC-CceEEEEecccch-HHHHHHHHhCcCccceeEEEcCCCCCCCCCchhhhhhhcccchhhhhhhHHHHHHHH
Q 022534 100 LLDVLEVK-YPFFLVVQGFLVG-SYGLTWALKNPSRISKLAILNSPLTASSPLPGLFQQLRIPLLGEFTAQNAIMAERFI 177 (295)
Q Consensus 100 ~~~~l~~~-~~~~lv~~G~~~G-~~~~~~a~~~p~~v~~lil~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (295)
+.++.+++ +.++++ |+|.| .+++.+++++|+.+.+++.+++ .. +.
T Consensus 94 ~~~~~~~~~~~i~l~--GfS~Gg~~al~~a~~~~~~~~~vv~~sg-~~-----~~------------------------- 140 (232)
T PRK11460 94 WQQQSGVGASATALI--GFSQGAIMALEAVKAEPGLAGRVIAFSG-RY-----AS------------------------- 140 (232)
T ss_pred HHHhcCCChhhEEEE--EECHHHHHHHHHHHhCCCcceEEEEecc-cc-----cc-------------------------
Confidence 33344443 235565 77776 4677778889987776665532 00 00
Q ss_pred HhCCCccccccccccccccccccCCchhHHHHHHHhcchhhhhHhhhcCcCCCCCCCcEEEEEeCCCCCCCcchHHHHHh
Q 022534 178 EAGSPYVLKLDKADVYRLPYLASSGPGFALLEAARKVNFKDISSRIGAGFSSGSWDKPVLVAWGISDKYLPQSVAEEFQK 257 (295)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~ 257 (295)
.+ . .. ..+.|+++++|++|+++|.+.+.++.+
T Consensus 141 ---~~--------------~-------------------~~------------~~~~pvli~hG~~D~vvp~~~~~~~~~ 172 (232)
T PRK11460 141 ---LP--------------E-------------------TA------------PTATTIHLIHGGEDPVIDVAHAVAAQE 172 (232)
T ss_pred ---cc--------------c-------------------cc------------cCCCcEEEEecCCCCccCHHHHHHHHH
Confidence 00 0 00 115899999999999999888877665
Q ss_pred cC---CCCeEEEEecCCCCCCCCCChHHHHHHHHHHHH
Q 022534 258 GN---PNVVKLQMIEGAGHMPQEDWPEKVVDGLRYFFL 292 (295)
Q Consensus 258 ~~---~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~ 292 (295)
.+ ...+++++++++||....+.-+.+.+-+.+++.
T Consensus 173 ~L~~~g~~~~~~~~~~~gH~i~~~~~~~~~~~l~~~l~ 210 (232)
T PRK11460 173 ALISLGGDVTLDIVEDLGHAIDPRLMQFALDRLRYTVP 210 (232)
T ss_pred HHHHCCCCeEEEEECCCCCCCCHHHHHHHHHHHHHHcc
Confidence 43 234688999999999865555555555555443
|
|
| >TIGR02821 fghA_ester_D S-formylglutathione hydrolase | Back alignment and domain information |
|---|
Probab=99.51 E-value=8.1e-12 Score=107.68 Aligned_cols=130 Identities=18% Similarity=0.240 Sum_probs=80.3
Q ss_pred cceeeEEeCcEEEEEEEcCCC---CCCCceEEEEcCCCCCCccchhh--HHHhh-hCCCeEEEeCC--CCCCCCCCCCC-
Q 022534 11 EYGSYIKSGEYRWFVRETGSA---DSRLGTIVFLHGAPSHSYSYRNV--MSQMS-DAGFHCFAPDW--LGFGFSDKPEK- 81 (295)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~g~~---~~~~~~vv~lHG~~~~~~~w~~~--~~~l~-~~~~~via~Dl--~G~G~S~~~~~- 81 (295)
.+..+...-+..+.|..+.++ ..+.|+|+|+||++++...|... +..++ +.||.|++||. +|+|.|.....
T Consensus 15 ~~~~~s~~~~~~~~~~v~~P~~~~~~~~P~vvllHG~~~~~~~~~~~~~~~~la~~~g~~Vv~Pd~~~~g~~~~~~~~~w 94 (275)
T TIGR02821 15 FYRHKSETCGVPMTFGVFLPPQAAAGPVPVLWYLSGLTCTHENFMIKAGAQRFAAEHGLALVAPDTSPRGTGIAGEDDAW 94 (275)
T ss_pred EEEEeccccCCceEEEEEcCCCccCCCCCEEEEccCCCCCccHHHhhhHHHHHHhhcCcEEEEeCCCCCcCCCCCCcccc
Confidence 344445555556555555432 23358999999999998888543 34454 45899999998 66664432100
Q ss_pred ------C-C-------CCCCCCHHH-HHHHHHHHHHH-hCCC-CceEEEEecccchH-HHHHHHHhCcCccceeEEEcC
Q 022534 82 ------G-Y-------DDFDFTENE-FHEELDKLLDV-LEVK-YPFFLVVQGFLVGS-YGLTWALKNPSRISKLAILNS 142 (295)
Q Consensus 82 ------~-~-------~~~~~~~~~-~~~~l~~~~~~-l~~~-~~~~lv~~G~~~G~-~~~~~a~~~p~~v~~lil~~~ 142 (295)
. + ....+...+ +++++..++++ ++++ +.+.++ |+|+|+ +++.+++++|+.+++++++++
T Consensus 95 ~~g~~~~~~~d~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~--G~S~GG~~a~~~a~~~p~~~~~~~~~~~ 171 (275)
T TIGR02821 95 DFGKGAGFYVDATEEPWSQHYRMYSYIVQELPALVAAQFPLDGERQGIT--GHSMGGHGALVIALKNPDRFKSVSAFAP 171 (275)
T ss_pred cccCCccccccCCcCcccccchHHHHHHHHHHHHHHhhCCCCCCceEEE--EEChhHHHHHHHHHhCcccceEEEEECC
Confidence 0 0 000123233 46778888876 2332 235555 777764 677888899999999988753
|
This model describes a protein family from bacteria, yeast, and human, with a conserved critical role in formaldehyde detoxification as S-formylglutathione hydrolase (EC 3.1.2.12). Members in eukaryotes such as the human protein are better known as esterase D (EC 3.1.1.1), an enzyme with broad specificity, although S-formylglutathione hydrolase has now been demonstrated as well. |
| >COG2021 MET2 Homoserine acetyltransferase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.50 E-value=1.6e-12 Score=112.26 Aligned_cols=268 Identities=21% Similarity=0.263 Sum_probs=148.8
Q ss_pred cEEEEEEEcCCCCC-CCceEEEEcCCCCCCc-----------cchhhHHH---hhhCCCeEEEeCCCCCC-CCCCCCCCC
Q 022534 20 EYRWFVRETGSADS-RLGTIVFLHGAPSHSY-----------SYRNVMSQ---MSDAGFHCFAPDWLGFG-FSDKPEKGY 83 (295)
Q Consensus 20 ~~~~~~~~~g~~~~-~~~~vv~lHG~~~~~~-----------~w~~~~~~---l~~~~~~via~Dl~G~G-~S~~~~~~~ 83 (295)
+..+-|+.+|.-.. ....||++|++.+++. .|..++.. +....|-||+.|-.|.+ .|+.|....
T Consensus 35 ~~~vay~T~Gtln~~~~NaVli~HaLtG~~h~~~~~~~~~~GWW~~liGpG~~iDt~r~fvIc~NvlG~c~GStgP~s~~ 114 (368)
T COG2021 35 DARVAYETYGTLNAEKDNAVLICHALTGDSHAAGTADDGEKGWWDDLIGPGKPIDTERFFVICTNVLGGCKGSTGPSSIN 114 (368)
T ss_pred CcEEEEEecccccccCCceEEEeccccCcccccccCCCCCCccHHHhcCCCCCCCccceEEEEecCCCCCCCCCCCCCcC
Confidence 47888899986332 2347999999987442 45555422 44457999999999998 666543221
Q ss_pred CC--------CCCCHHHHHHHHHHHHHHhCCCCceEEEEecccchHHHHHHHHhCcCccceeEEEcCCCCCCCCCchhhh
Q 022534 84 DD--------FDFTENEFHEELDKLLDVLEVKYPFFLVVQGFLVGSYGLTWALKNPSRISKLAILNSPLTASSPLPGLFQ 155 (295)
Q Consensus 84 ~~--------~~~~~~~~~~~l~~~~~~l~~~~~~~lv~~G~~~G~~~~~~a~~~p~~v~~lil~~~p~~~~~~~~~~~~ 155 (295)
.. ..+++.|.++.-..++++||+++ +..|.+|.+||+-++.|+..|||+|.+++.++++......... +.
T Consensus 115 p~g~~yg~~FP~~ti~D~V~aq~~ll~~LGI~~-l~avvGgSmGGMqaleWa~~yPd~V~~~i~ia~~~r~s~~~ia-~~ 192 (368)
T COG2021 115 PGGKPYGSDFPVITIRDMVRAQRLLLDALGIKK-LAAVVGGSMGGMQALEWAIRYPDRVRRAIPIATAARLSAQNIA-FN 192 (368)
T ss_pred CCCCccccCCCcccHHHHHHHHHHHHHhcCcce-EeeeeccChHHHHHHHHHHhChHHHhhhheecccccCCHHHHH-HH
Confidence 11 24688899988899999999997 4434344334456899999999999999988764432111000 00
Q ss_pred hhhc------c-c--------------------chhhhhhhH-HHHHHHHHhC--CCcccc--ccccccc-cc---cccc
Q 022534 156 QLRI------P-L--------------------LGEFTAQNA-IMAERFIEAG--SPYVLK--LDKADVY-RL---PYLA 199 (295)
Q Consensus 156 ~~~~------~-~--------------------~~~~~~~~~-~~~~~~~~~~--~~~~~~--~~~~~~~-~~---~~~~ 199 (295)
.... | + +..++.... .+.++|-... .+.... ....+.| +. .+..
T Consensus 193 ~~~r~AI~~DP~~n~G~Y~~~~~P~~GL~~AR~l~~ltYrS~~~~~~rF~r~~~~~~~~~~~~~f~vESYL~~qg~kf~~ 272 (368)
T COG2021 193 EVQRQAIEADPDWNGGDYYEGTQPERGLRLARMLAHLTYRSEEELDERFGRRLQADPLRGGGVRFAVESYLDYQGDKFVA 272 (368)
T ss_pred HHHHHHHHhCCCccCCCccCCCCcchhHHHHHHHHHHHccCHHHHHHHhcccccccccCCCchhHHHHHHHHHHHHHHHh
Confidence 0000 0 0 000001100 0111111000 000000 0000000 00 0000
Q ss_pred cCCc-hhHHHHHHHhcchhhhh---HhhhcCcCCCCCCCcEEEEEeCCCCCCCcchHHHHHhcCCCCeEE-EEecCCCCC
Q 022534 200 SSGP-GFALLEAARKVNFKDIS---SRIGAGFSSGSWDKPVLVAWGISDKYLPQSVAEEFQKGNPNVVKL-QMIEGAGHM 274 (295)
Q Consensus 200 ~~~~-~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~-~~i~~~gH~ 274 (295)
.-++ .+.+. .+..+..|.. ..+... .+++++|+|++.-+.|+..|++....+.+.++....+ ++-...||-
T Consensus 273 rfDaNsYL~l--t~ald~~D~s~~~~~l~~a--l~~i~~~~lv~gi~sD~lfp~~~~~~~~~~L~~~~~~~~i~S~~GHD 348 (368)
T COG2021 273 RFDANSYLYL--TRALDYHDVSRGRGDLTAA--LARIKAPVLVVGITSDWLFPPELQRALAEALPAAGALREIDSPYGHD 348 (368)
T ss_pred ccCcchHHHH--HHHHHhcCCCCCcCcHHHH--HhcCccCEEEEEecccccCCHHHHHHHHHhccccCceEEecCCCCch
Confidence 0000 00000 0001111100 000000 2368899999999999999999999999888863225 566678999
Q ss_pred CCCCChHHHHHHHHHHHHh
Q 022534 275 PQEDWPEKVVDGLRYFFLN 293 (295)
Q Consensus 275 ~~~e~p~~~~~~i~~fl~~ 293 (295)
..+...+.+...|++||..
T Consensus 349 aFL~e~~~~~~~i~~fL~~ 367 (368)
T COG2021 349 AFLVESEAVGPLIRKFLAL 367 (368)
T ss_pred hhhcchhhhhHHHHHHhhc
Confidence 8888888899999999975
|
|
| >PLN02442 S-formylglutathione hydrolase | Back alignment and domain information |
|---|
Probab=99.49 E-value=4.4e-12 Score=109.72 Aligned_cols=107 Identities=20% Similarity=0.314 Sum_probs=67.1
Q ss_pred CCceEEEEcCCCCCCccchh---hHHHhhhCCCeEEEeCCCCCC-----CCCC-------------CCCC---CCCCCCC
Q 022534 34 RLGTIVFLHGAPSHSYSYRN---VMSQMSDAGFHCFAPDWLGFG-----FSDK-------------PEKG---YDDFDFT 89 (295)
Q Consensus 34 ~~~~vv~lHG~~~~~~~w~~---~~~~l~~~~~~via~Dl~G~G-----~S~~-------------~~~~---~~~~~~~ 89 (295)
+.|+|+|+||++++...|.. +...++..||.|++||.+++| .++. .... +.-.+|-
T Consensus 46 ~~Pvv~~lHG~~~~~~~~~~~~~~~~~~~~~g~~Vv~pd~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 125 (283)
T PLN02442 46 KVPVLYWLSGLTCTDENFIQKSGAQRAAAARGIALVAPDTSPRGLNVEGEADSWDFGVGAGFYLNATQEKWKNWRMYDYV 125 (283)
T ss_pred CCCEEEEecCCCcChHHHHHhhhHHHHHhhcCeEEEecCCCCCCCCCCCCccccccCCCcceeeccccCCCcccchhhhH
Confidence 46899999999887777743 335556669999999998877 1110 0000 0000112
Q ss_pred HHHHHHHHHHHHHHhCCCCceEEEEecccchH-HHHHHHHhCcCccceeEEEcCC
Q 022534 90 ENEFHEELDKLLDVLEVKYPFFLVVQGFLVGS-YGLTWALKNPSRISKLAILNSP 143 (295)
Q Consensus 90 ~~~~~~~l~~~~~~l~~~~~~~lv~~G~~~G~-~~~~~a~~~p~~v~~lil~~~p 143 (295)
.+++...+....+.++.++ ++++ |+|+|+ .++.++.++|+++++++.+++.
T Consensus 126 ~~~l~~~i~~~~~~~~~~~-~~i~--G~S~GG~~a~~~a~~~p~~~~~~~~~~~~ 177 (283)
T PLN02442 126 VKELPKLLSDNFDQLDTSR-ASIF--GHSMGGHGALTIYLKNPDKYKSVSAFAPI 177 (283)
T ss_pred HHHHHHHHHHHHHhcCCCc-eEEE--EEChhHHHHHHHHHhCchhEEEEEEECCc
Confidence 2334444444444456554 5555 777765 5677888999999998887543
|
|
| >KOG4667 consensus Predicted esterase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.48 E-value=5.2e-12 Score=100.58 Aligned_cols=206 Identities=25% Similarity=0.346 Sum_probs=119.3
Q ss_pred ceEEEEcCCCCCCcc--chhhHHHhhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhC-CCC--ce
Q 022534 36 GTIVFLHGAPSHSYS--YRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEELDKLLDVLE-VKY--PF 110 (295)
Q Consensus 36 ~~vv~lHG~~~~~~~--w~~~~~~l~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~l~~~~~~l~-~~~--~~ 110 (295)
..+|++||+-++... ...++..|++.|+.++-+|.+|-|.|+..-. +-+|. ..++|+..+++.+. .+. ++
T Consensus 34 e~vvlcHGfrS~Kn~~~~~~vA~~~e~~gis~fRfDF~GnGeS~gsf~-~Gn~~----~eadDL~sV~q~~s~~nr~v~v 108 (269)
T KOG4667|consen 34 EIVVLCHGFRSHKNAIIMKNVAKALEKEGISAFRFDFSGNGESEGSFY-YGNYN----TEADDLHSVIQYFSNSNRVVPV 108 (269)
T ss_pred eEEEEeeccccccchHHHHHHHHHHHhcCceEEEEEecCCCCcCCccc-cCccc----chHHHHHHHHHHhccCceEEEE
Confidence 489999999775543 4577778888899999999999999996421 11222 34588888888763 232 23
Q ss_pred EEEEecccchH-HHHHHHHhCcCccceeEEEcCCCCCCCCCchhhhhhhcccchhhhhhhHHHHHHHHHhCCCccccccc
Q 022534 111 FLVVQGFLVGS-YGLTWALKNPSRISKLAILNSPLTASSPLPGLFQQLRIPLLGEFTAQNAIMAERFIEAGSPYVLKLDK 189 (295)
Q Consensus 111 ~lv~~G~~~G~-~~~~~a~~~p~~v~~lil~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (295)
++ |||-|+ .+..+|.++++ +..++-++.-++......+. . ++. ..++..+.+. +.....
T Consensus 109 i~---gHSkGg~Vvl~ya~K~~d-~~~viNcsGRydl~~~I~eR---l-----g~~------~l~~ike~Gf--id~~~r 168 (269)
T KOG4667|consen 109 IL---GHSKGGDVVLLYASKYHD-IRNVINCSGRYDLKNGINER---L-----GED------YLERIKEQGF--IDVGPR 168 (269)
T ss_pred EE---eecCccHHHHHHHHhhcC-chheEEcccccchhcchhhh---h-----ccc------HHHHHHhCCc--eecCcc
Confidence 33 788664 56789999988 56555443323221111000 0 000 0011111110 000000
Q ss_pred cccccccccccCCchhHHHHHHHhcchhhhhHhhhcCcCCCCCCCcEEEEEeCCCCCCCcchHHHHHhcCCCCeEEEEec
Q 022534 190 ADVYRLPYLASSGPGFALLEAARKVNFKDISSRIGAGFSSGSWDKPVLVAWGISDKYLPQSVAEEFQKGNPNVVKLQMIE 269 (295)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~ 269 (295)
..-+ ++.. ....+.+.+. .+.......| ..+||+|-+||..|.++|.+.+.+|++.+++ .++.+||
T Consensus 169 kG~y--~~rv---t~eSlmdrLn-td~h~aclkI-------d~~C~VLTvhGs~D~IVPve~AkefAk~i~n-H~L~iIE 234 (269)
T KOG4667|consen 169 KGKY--GYRV---TEESLMDRLN-TDIHEACLKI-------DKQCRVLTVHGSEDEIVPVEDAKEFAKIIPN-HKLEIIE 234 (269)
T ss_pred cCCc--Ccee---cHHHHHHHHh-chhhhhhcCc-------CccCceEEEeccCCceeechhHHHHHHhccC-CceEEec
Confidence 0000 0000 0011111111 1111111112 3489999999999999999999999999998 7999999
Q ss_pred CCCCCCCCCCh
Q 022534 270 GAGHMPQEDWP 280 (295)
Q Consensus 270 ~~gH~~~~e~p 280 (295)
||-|.....+-
T Consensus 235 gADHnyt~~q~ 245 (269)
T KOG4667|consen 235 GADHNYTGHQS 245 (269)
T ss_pred CCCcCccchhh
Confidence 99998755443
|
|
| >COG0429 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.47 E-value=2.9e-12 Score=108.98 Aligned_cols=258 Identities=20% Similarity=0.240 Sum_probs=125.8
Q ss_pred CcEEEEEEEcCCCCCCCceEEEEcCCCCCCcc-c-hhhHHHhhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCCHHHHHHH
Q 022534 19 GEYRWFVRETGSADSRLGTIVFLHGAPSHSYS-Y-RNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEE 96 (295)
Q Consensus 19 ~~~~~~~~~~g~~~~~~~~vv~lHG~~~~~~~-w-~~~~~~l~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~ 96 (295)
+|........-+.++.+|.||++||+.+++.+ | +.++..+.++||.|+++|.||||++....+.. |+ .....|
T Consensus 59 g~~~~ldw~~~p~~~~~P~vVl~HGL~G~s~s~y~r~L~~~~~~rg~~~Vv~~~Rgcs~~~n~~p~~----yh-~G~t~D 133 (345)
T COG0429 59 GGFIDLDWSEDPRAAKKPLVVLFHGLEGSSNSPYARGLMRALSRRGWLVVVFHFRGCSGEANTSPRL----YH-SGETED 133 (345)
T ss_pred CCEEEEeeccCccccCCceEEEEeccCCCCcCHHHHHHHHHHHhcCCeEEEEecccccCCcccCcce----ec-ccchhH
Confidence 34444333323344456899999999766654 3 35667787889999999999999998754332 11 233466
Q ss_pred HHHHHHHh---CCCCceEEEEecccch-HHHHHH-HHhCcC-ccceeEEEcCCCCCCCCCch---hhh-hhhcccchhhh
Q 022534 97 LDKLLDVL---EVKYPFFLVVQGFLVG-SYGLTW-ALKNPS-RISKLAILNSPLTASSPLPG---LFQ-QLRIPLLGEFT 166 (295)
Q Consensus 97 l~~~~~~l---~~~~~~~lv~~G~~~G-~~~~~~-a~~~p~-~v~~lil~~~p~~~~~~~~~---~~~-~~~~~~~~~~~ 166 (295)
+..+++.+ ..+.|+..+ |.|.| ++-+.+ +.+..+ .+.+-+.+++|.+...-... .+. ++..+.+.+..
T Consensus 134 ~~~~l~~l~~~~~~r~~~av--G~SLGgnmLa~ylgeeg~d~~~~aa~~vs~P~Dl~~~~~~l~~~~s~~ly~r~l~~~L 211 (345)
T COG0429 134 IRFFLDWLKARFPPRPLYAV--GFSLGGNMLANYLGEEGDDLPLDAAVAVSAPFDLEACAYRLDSGFSLRLYSRYLLRNL 211 (345)
T ss_pred HHHHHHHHHHhCCCCceEEE--EecccHHHHHHHHHhhccCcccceeeeeeCHHHHHHHHHHhcCchhhhhhHHHHHHHH
Confidence 66666654 456666655 77665 342333 332211 34455555566543110000 000 11000001110
Q ss_pred hhhHH-HHHHHHHhCCCcc-ccccccccccccccccCCchhHHHHHHHhcchhhhhHhhh---cCcCCCCCCCcEEEEEe
Q 022534 167 AQNAI-MAERFIEAGSPYV-LKLDKADVYRLPYLASSGPGFALLEAARKVNFKDISSRIG---AGFSSGSWDKPVLVAWG 241 (295)
Q Consensus 167 ~~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~P~l~i~G 241 (295)
.++.. ....+ ....+.. .... +...+. .++.-.-.+....+++..+... ......+|.+|+|+|+.
T Consensus 212 ~~~~~~kl~~l-~~~~p~~~~~~i-k~~~ti-------~eFD~~~Tap~~Gf~da~dYYr~aSs~~~L~~Ir~PtLii~A 282 (345)
T COG0429 212 KRNAARKLKEL-EPSLPGTVLAAI-KRCRTI-------REFDDLLTAPLHGFADAEDYYRQASSLPLLPKIRKPTLIINA 282 (345)
T ss_pred HHHHHHHHHhc-CcccCcHHHHHH-HhhchH-------HhccceeeecccCCCcHHHHHHhccccccccccccceEEEec
Confidence 00000 00000 0000000 0000 000000 0000000000011222222111 11113478999999999
Q ss_pred CCCCCCCcchHHHHHh-cCCCCeEEEEecCCCCCCCCC----ChH-HHHHHHHHHHHh
Q 022534 242 ISDKYLPQSVAEEFQK-GNPNVVKLQMIEGAGHMPQED----WPE-KVVDGLRYFFLN 293 (295)
Q Consensus 242 ~~D~~~~~~~~~~~~~-~~~~~~~~~~i~~~gH~~~~e----~p~-~~~~~i~~fl~~ 293 (295)
.+||+++++...+... ..|+ +.+.+-+..||.-.+. +|. =.-+.|.+|++.
T Consensus 283 ~DDP~~~~~~iP~~~~~~np~-v~l~~t~~GGHvGfl~~~~~~~~~W~~~ri~~~l~~ 339 (345)
T COG0429 283 KDDPFMPPEVIPKLQEMLNPN-VLLQLTEHGGHVGFLGGKLLHPQMWLEQRILDWLDP 339 (345)
T ss_pred CCCCCCChhhCCcchhcCCCc-eEEEeecCCceEEeccCccccchhhHHHHHHHHHHH
Confidence 9999999877766655 5554 8999999999987666 332 233455555544
|
|
| >PLN00021 chlorophyllase | Back alignment and domain information |
|---|
Probab=99.44 E-value=5.3e-12 Score=110.21 Aligned_cols=96 Identities=21% Similarity=0.284 Sum_probs=64.1
Q ss_pred CceEEEEcCCCCCCccchhhHHHhhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCCHHH---HHHHHHHHHHH-------h
Q 022534 35 LGTIVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTENE---FHEELDKLLDV-------L 104 (295)
Q Consensus 35 ~~~vv~lHG~~~~~~~w~~~~~~l~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~---~~~~l~~~~~~-------l 104 (295)
.|+|||+||++.+...|..+++.|++.||.|+++|++|++.+... ..+++ ..+.+.+.++. .
T Consensus 52 ~PvVv~lHG~~~~~~~y~~l~~~Las~G~~VvapD~~g~~~~~~~--------~~i~d~~~~~~~l~~~l~~~l~~~~~~ 123 (313)
T PLN00021 52 YPVLLFLHGYLLYNSFYSQLLQHIASHGFIVVAPQLYTLAGPDGT--------DEIKDAAAVINWLSSGLAAVLPEGVRP 123 (313)
T ss_pred CCEEEEECCCCCCcccHHHHHHHHHhCCCEEEEecCCCcCCCCch--------hhHHHHHHHHHHHHhhhhhhccccccc
Confidence 579999999999999999999999988999999999997543211 01222 22222222221 1
Q ss_pred CCCCceEEEEecccch-HHHHHHHHhCcC-----ccceeEEEc
Q 022534 105 EVKYPFFLVVQGFLVG-SYGLTWALKNPS-----RISKLAILN 141 (295)
Q Consensus 105 ~~~~~~~lv~~G~~~G-~~~~~~a~~~p~-----~v~~lil~~ 141 (295)
+.+ .+.++ |||+| .+++.+|.++|+ +++++++++
T Consensus 124 d~~-~v~l~--GHS~GG~iA~~lA~~~~~~~~~~~v~ali~ld 163 (313)
T PLN00021 124 DLS-KLALA--GHSRGGKTAFALALGKAAVSLPLKFSALIGLD 163 (313)
T ss_pred Chh-heEEE--EECcchHHHHHHHhhccccccccceeeEEeec
Confidence 223 35666 77765 567788888775 567777664
|
|
| >COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.44 E-value=4.1e-12 Score=121.15 Aligned_cols=236 Identities=18% Similarity=0.158 Sum_probs=132.0
Q ss_pred cccceeeEEeCcEEEEEEEcCCCCCC----CceEEEEcCCCCCCc--cchhhHHHhhhCCCeEEEeCCCCCCCCC-----
Q 022534 9 GREYGSYIKSGEYRWFVRETGSADSR----LGTIVFLHGAPSHSY--SYRNVMSQMSDAGFHCFAPDWLGFGFSD----- 77 (295)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~g~~~~~----~~~vv~lHG~~~~~~--~w~~~~~~l~~~~~~via~Dl~G~G~S~----- 77 (295)
.+|.-++-..+|..++.....+++.. -|.||++||.|.... .|...+..|+.+||-|++++.||-+.-.
T Consensus 364 ~~e~~~~~~~dG~~i~~~l~~P~~~~~~k~yP~i~~~hGGP~~~~~~~~~~~~q~~~~~G~~V~~~n~RGS~GyG~~F~~ 443 (620)
T COG1506 364 EPEPVTYKSNDGETIHGWLYKPPGFDPRKKYPLIVYIHGGPSAQVGYSFNPEIQVLASAGYAVLAPNYRGSTGYGREFAD 443 (620)
T ss_pred CceEEEEEcCCCCEEEEEEecCCCCCCCCCCCEEEEeCCCCccccccccchhhHHHhcCCeEEEEeCCCCCCccHHHHHH
Confidence 34555555557888888777654322 278999999985443 4667778888889999999999665532
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHHhCC-C-CceEEEEecccchHHHHHHHHhCcCccceeEEEcCCCCCCCCCchhhh
Q 022534 78 KPEKGYDDFDFTENEFHEELDKLLDVLEV-K-YPFFLVVQGFLVGSYGLTWALKNPSRISKLAILNSPLTASSPLPGLFQ 155 (295)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~l~~~~~~l~~-~-~~~~lv~~G~~~G~~~~~~a~~~p~~v~~lil~~~p~~~~~~~~~~~~ 155 (295)
.....+ + ....+|+.+.+. ++++.+. + +.+.+ .|+|-|++...+++.+-+++++.+...++..-. ..+.
T Consensus 444 ~~~~~~-g-~~~~~D~~~~~~-~l~~~~~~d~~ri~i--~G~SyGGymtl~~~~~~~~f~a~~~~~~~~~~~----~~~~ 514 (620)
T COG1506 444 AIRGDW-G-GVDLEDLIAAVD-ALVKLPLVDPERIGI--TGGSYGGYMTLLAATKTPRFKAAVAVAGGVDWL----LYFG 514 (620)
T ss_pred hhhhcc-C-CccHHHHHHHHH-HHHhCCCcChHHeEE--eccChHHHHHHHHHhcCchhheEEeccCcchhh----hhcc
Confidence 111111 0 112355555555 4444443 2 12333 377766654555554433677666543322100 0000
Q ss_pred hhhcccchhhhhhhHHHHHHHHHhCCCccccccccccccccccccCCchhHHHHHHHhcchhhhhHhhhcCcCCCCCCCc
Q 022534 156 QLRIPLLGEFTAQNAIMAERFIEAGSPYVLKLDKADVYRLPYLASSGPGFALLEAARKVNFKDISSRIGAGFSSGSWDKP 235 (295)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P 235 (295)
....++.. ..+... ..+.- . ...+.. .. -.. ...++++|
T Consensus 515 ~~~~~~~~--------~~~~~~--~~~~~----~---------------~~~~~~---~s---p~~------~~~~i~~P 553 (620)
T COG1506 515 ESTEGLRF--------DPEENG--GGPPE----D---------------REKYED---RS---PIF------YADNIKTP 553 (620)
T ss_pred ccchhhcC--------CHHHhC--CCccc----C---------------hHHHHh---cC---hhh------hhcccCCC
Confidence 00000000 000000 00000 0 000000 00 000 11367899
Q ss_pred EEEEEeCCCCCCCcchHHHHHhcC---CCCeEEEEecCCCCCCCC-CChHHHHHHHHHHHHhc
Q 022534 236 VLVAWGISDKYLPQSVAEEFQKGN---PNVVKLQMIEGAGHMPQE-DWPEKVVDGLRYFFLNY 294 (295)
Q Consensus 236 ~l~i~G~~D~~~~~~~~~~~~~~~---~~~~~~~~i~~~gH~~~~-e~p~~~~~~i~~fl~~~ 294 (295)
+|+|||++|.-++.+.+.+|.+.+ ...++++++|+.+|.+.- ++-....+.+.+|+++.
T Consensus 554 ~LliHG~~D~~v~~~q~~~~~~aL~~~g~~~~~~~~p~e~H~~~~~~~~~~~~~~~~~~~~~~ 616 (620)
T COG1506 554 LLLIHGEEDDRVPIEQAEQLVDALKRKGKPVELVVFPDEGHGFSRPENRVKVLKEILDWFKRH 616 (620)
T ss_pred EEEEeecCCccCChHHHHHHHHHHHHcCceEEEEEeCCCCcCCCCchhHHHHHHHHHHHHHHH
Confidence 999999999999988888876443 335799999999998755 55677888888888763
|
|
| >KOG4391 consensus Predicted alpha/beta hydrolase BEM46 [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.39 E-value=3.4e-12 Score=101.76 Aligned_cols=212 Identities=19% Similarity=0.275 Sum_probs=131.3
Q ss_pred CcEEEEEEEcCCCCCCCceEEEEcCCCCCCccchhhHHHh-hhCCCeEEEeCCCCCCCCCCCCCCCCCCCCCHHHHHHHH
Q 022534 19 GEYRWFVRETGSADSRLGTIVFLHGAPSHSYSYRNVMSQM-SDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEEL 97 (295)
Q Consensus 19 ~~~~~~~~~~g~~~~~~~~vv~lHG~~~~~~~w~~~~~~l-~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~l 97 (295)
+.++++.-..-+ ++..|+++++|+..++-+-.-.++.-+ ...+..|+.+|.||+|+|+... +.+.+.-|-
T Consensus 63 D~vtL~a~~~~~-E~S~pTlLyfh~NAGNmGhr~~i~~~fy~~l~mnv~ivsYRGYG~S~Gsp--------sE~GL~lDs 133 (300)
T KOG4391|consen 63 DKVTLDAYLMLS-ESSRPTLLYFHANAGNMGHRLPIARVFYVNLKMNVLIVSYRGYGKSEGSP--------SEEGLKLDS 133 (300)
T ss_pred cceeEeeeeecc-cCCCceEEEEccCCCcccchhhHHHHHHHHcCceEEEEEeeccccCCCCc--------cccceeccH
Confidence 345555433332 234789999999998887766666554 3447899999999999999743 234555566
Q ss_pred HHHHHHhC----CC-CceEEEEecccchHHHHHHHHhCcCccceeEEEcCCCCCCCCCchhhhhhhcccchhhhhhhHHH
Q 022534 98 DKLLDVLE----VK-YPFFLVVQGFLVGSYGLTWALKNPSRISKLAILNSPLTASSPLPGLFQQLRIPLLGEFTAQNAIM 172 (295)
Q Consensus 98 ~~~~~~l~----~~-~~~~lv~~G~~~G~~~~~~a~~~p~~v~~lil~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (295)
.++++.+. ++ .+++|.|.+ +||+.++.+|++..+++.++++-+. ... .| ++..|+.-.+.
T Consensus 134 ~avldyl~t~~~~dktkivlfGrS-lGGAvai~lask~~~ri~~~ivENT-F~S---Ip----~~~i~~v~p~~------ 198 (300)
T KOG4391|consen 134 EAVLDYLMTRPDLDKTKIVLFGRS-LGGAVAIHLASKNSDRISAIIVENT-FLS---IP----HMAIPLVFPFP------ 198 (300)
T ss_pred HHHHHHHhcCccCCcceEEEEecc-cCCeeEEEeeccchhheeeeeeech-hcc---ch----hhhhheeccch------
Confidence 66666652 22 345666432 3567788889999999998887643 110 01 11111110000
Q ss_pred HHHHHHhCCCccccccccccccccccccCCchhHHHHHHHhcchhhhhHhhhcCcCCCCCCCcEEEEEeCCCCCCCcchH
Q 022534 173 AERFIEAGSPYVLKLDKADVYRLPYLASSGPGFALLEAARKVNFKDISSRIGAGFSSGSWDKPVLVAWGISDKYLPQSVA 252 (295)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~~~~~~ 252 (295)
-+.++ .++-. ..+. ...++. .-++|.|+|.|..|.++|+..-
T Consensus 199 -~k~i~---------------------------~lc~k-n~~~---S~~ki~------~~~~P~LFiSGlkDelVPP~~M 240 (300)
T KOG4391|consen 199 -MKYIP---------------------------LLCYK-NKWL---SYRKIG------QCRMPFLFISGLKDELVPPVMM 240 (300)
T ss_pred -hhHHH---------------------------HHHHH-hhhc---chhhhc------cccCceEEeecCccccCCcHHH
Confidence 00000 00000 0000 001111 2268999999999999999999
Q ss_pred HHHHhcCCC-CeEEEEecCCCCCCCCCChHHHHHHHHHHHHh
Q 022534 253 EEFQKGNPN-VVKLQMIEGAGHMPQEDWPEKVVDGLRYFFLN 293 (295)
Q Consensus 253 ~~~~~~~~~-~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 293 (295)
+++++.+|. .+++.++|++.|.-.+- -|...++|++||..
T Consensus 241 r~Ly~~c~S~~Krl~eFP~gtHNDT~i-~dGYfq~i~dFlaE 281 (300)
T KOG4391|consen 241 RQLYELCPSRTKRLAEFPDGTHNDTWI-CDGYFQAIEDFLAE 281 (300)
T ss_pred HHHHHhCchhhhhheeCCCCccCceEE-eccHHHHHHHHHHH
Confidence 999998875 35899999999974432 46677889999864
|
|
| >COG3208 GrsT Predicted thioesterase involved in non-ribosomal peptide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=99.37 E-value=8.8e-11 Score=96.12 Aligned_cols=218 Identities=16% Similarity=0.199 Sum_probs=133.5
Q ss_pred CceEEEEcCCCCCCccchhhHHHhhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCceEEEE
Q 022534 35 LGTIVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEELDKLLDVLEVKYPFFLVV 114 (295)
Q Consensus 35 ~~~vv~lHG~~~~~~~w~~~~~~l~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~~lv~ 114 (295)
++.++++|=.|+++..|+.+...|.. ...++++.+||+|.--... ...+++.+++.|..-+...-.++|+.++
T Consensus 7 ~~~L~cfP~AGGsa~~fr~W~~~lp~-~iel~avqlPGR~~r~~ep-----~~~di~~Lad~la~el~~~~~d~P~alf- 79 (244)
T COG3208 7 RLRLFCFPHAGGSASLFRSWSRRLPA-DIELLAVQLPGRGDRFGEP-----LLTDIESLADELANELLPPLLDAPFALF- 79 (244)
T ss_pred CceEEEecCCCCCHHHHHHHHhhCCc-hhheeeecCCCcccccCCc-----ccccHHHHHHHHHHHhccccCCCCeeec-
Confidence 56899999999999999999888875 6999999999998553321 1236677777777766632246788887
Q ss_pred ecccchH-HHHHHHHhC---cCccceeEEEcCCCCCCCCCchhhhhhhcccchhhhhhhHHHHHHHHHh-CCC-cccccc
Q 022534 115 QGFLVGS-YGLTWALKN---PSRISKLAILNSPLTASSPLPGLFQQLRIPLLGEFTAQNAIMAERFIEA-GSP-YVLKLD 188 (295)
Q Consensus 115 ~G~~~G~-~~~~~a~~~---p~~v~~lil~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~ 188 (295)
|||+|+ +|..+|.+. --...++.++++.......... ... . .+..+.+...+. +.+ .++.
T Consensus 80 -GHSmGa~lAfEvArrl~~~g~~p~~lfisg~~aP~~~~~~~-i~~--------~--~D~~~l~~l~~lgG~p~e~le-- 145 (244)
T COG3208 80 -GHSMGAMLAFEVARRLERAGLPPRALFISGCRAPHYDRGKQ-IHH--------L--DDADFLADLVDLGGTPPELLE-- 145 (244)
T ss_pred -ccchhHHHHHHHHHHHHHcCCCcceEEEecCCCCCCcccCC-ccC--------C--CHHHHHHHHHHhCCCChHHhc--
Confidence 778764 576776532 1225667666543221100000 000 0 011111111111 111 1110
Q ss_pred ccccccccccccCCchh-HHHHHHHhcchhhhhHhhhcCcC---CCCCCCcEEEEEeCCCCCCCcchHHHHHhcCCCCeE
Q 022534 189 KADVYRLPYLASSGPGF-ALLEAARKVNFKDISSRIGAGFS---SGSWDKPVLVAWGISDKYLPQSVAEEFQKGNPNVVK 264 (295)
Q Consensus 189 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~ 264 (295)
+++. ++.-...++++.- + ..|. ...++||+.++.|++|+.+..+....+++....+.+
T Consensus 146 -------------d~El~~l~LPilRAD~~~----~-e~Y~~~~~~pl~~pi~~~~G~~D~~vs~~~~~~W~~~t~~~f~ 207 (244)
T COG3208 146 -------------DPELMALFLPILRADFRA----L-ESYRYPPPAPLACPIHAFGGEKDHEVSRDELGAWREHTKGDFT 207 (244)
T ss_pred -------------CHHHHHHHHHHHHHHHHH----h-cccccCCCCCcCcceEEeccCcchhccHHHHHHHHHhhcCCce
Confidence 1111 0110111111110 0 1111 136789999999999999988888888888887789
Q ss_pred EEEecCCCCCCCCCChHHHHHHHHHHHH
Q 022534 265 LQMIEGAGHMPQEDWPEKVVDGLRYFFL 292 (295)
Q Consensus 265 ~~~i~~~gH~~~~e~p~~~~~~i~~fl~ 292 (295)
+..++| ||+...++.++|.+.|...+.
T Consensus 208 l~~fdG-gHFfl~~~~~~v~~~i~~~l~ 234 (244)
T COG3208 208 LRVFDG-GHFFLNQQREEVLARLEQHLA 234 (244)
T ss_pred EEEecC-cceehhhhHHHHHHHHHHHhh
Confidence 999985 999999999999999988874
|
|
| >TIGR03230 lipo_lipase lipoprotein lipase | Back alignment and domain information |
|---|
Probab=99.37 E-value=5.3e-12 Score=113.81 Aligned_cols=100 Identities=13% Similarity=0.294 Sum_probs=71.8
Q ss_pred CceEEEEcCCCCCC--ccchh-hHHHhh--hCCCeEEEeCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh----C
Q 022534 35 LGTIVFLHGAPSHS--YSYRN-VMSQMS--DAGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEELDKLLDVL----E 105 (295)
Q Consensus 35 ~~~vv~lHG~~~~~--~~w~~-~~~~l~--~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~l~~~~~~l----~ 105 (295)
+|++|+||||+++. ..|.. +++.|. +.+|+||++|++|||.|..+... .+ ...+++++.++++.+ +
T Consensus 41 ~ptvIlIHG~~~s~~~~~w~~~l~~al~~~~~d~nVI~VDw~g~g~s~y~~a~----~~-t~~vg~~la~lI~~L~~~~g 115 (442)
T TIGR03230 41 TKTFIVIHGWTVTGMFESWVPKLVAALYEREPSANVIVVDWLSRAQQHYPTSA----AY-TKLVGKDVAKFVNWMQEEFN 115 (442)
T ss_pred CCeEEEECCCCcCCcchhhHHHHHHHHHhccCCCEEEEEECCCcCCCCCcccc----cc-HHHHHHHHHHHHHHHHHhhC
Confidence 57999999998753 45765 455543 22699999999999998765321 22 245667777777754 3
Q ss_pred --CCCceEEEEecccchH-HHHHHHHhCcCccceeEEEcC
Q 022534 106 --VKYPFFLVVQGFLVGS-YGLTWALKNPSRISKLAILNS 142 (295)
Q Consensus 106 --~~~~~~lv~~G~~~G~-~~~~~a~~~p~~v~~lil~~~ 142 (295)
+++ ++|| |||+|+ +|..++..+|++|.+++++++
T Consensus 116 l~l~~-VhLI--GHSLGAhIAg~ag~~~p~rV~rItgLDP 152 (442)
T TIGR03230 116 YPWDN-VHLL--GYSLGAHVAGIAGSLTKHKVNRITGLDP 152 (442)
T ss_pred CCCCc-EEEE--EECHHHHHHHHHHHhCCcceeEEEEEcC
Confidence 444 7777 777764 677777889999999999975
|
Members of this protein family are lipoprotein lipase (EC 3.1.1.34), a eukaryotic triacylglycerol lipase active in plasma and similar to pancreatic and hepatic triacylglycerol lipases (EC 3.1.1.3). It is also called clearing factor. It cleaves chylomicron and VLDL triacylglycerols; it also has phospholipase A-1 activity. |
| >TIGR01840 esterase_phb esterase, PHB depolymerase family | Back alignment and domain information |
|---|
Probab=99.34 E-value=7.1e-11 Score=97.84 Aligned_cols=108 Identities=14% Similarity=0.145 Sum_probs=66.8
Q ss_pred CCceEEEEcCCCCCCccch---hhHHHhhhCCCeEEEeCCCCCCCCCCCCCCCCC-----CCCCHHHHHHHHHHHHHHhC
Q 022534 34 RLGTIVFLHGAPSHSYSYR---NVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDD-----FDFTENEFHEELDKLLDVLE 105 (295)
Q Consensus 34 ~~~~vv~lHG~~~~~~~w~---~~~~~l~~~~~~via~Dl~G~G~S~~~~~~~~~-----~~~~~~~~~~~l~~~~~~l~ 105 (295)
+.|.||++||++++...|. .+...+.+.||.|++||++|+|.+......+.. ......++.+.+..+.+..+
T Consensus 12 ~~P~vv~lHG~~~~~~~~~~~~~~~~~a~~~g~~Vv~Pd~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 91 (212)
T TIGR01840 12 PRALVLALHGCGQTASAYVIDWGWKAAADRYGFVLVAPEQTSYNSSNNCWDWFFTHHRARGTGEVESLHQLIDAVKANYS 91 (212)
T ss_pred CCCEEEEeCCCCCCHHHHhhhcChHHHHHhCCeEEEecCCcCccccCCCCCCCCccccCCCCccHHHHHHHHHHHHHhcC
Confidence 4689999999998776654 234444456899999999999865431100000 00011233333344444434
Q ss_pred CC-CceEEEEecccch-HHHHHHHHhCcCccceeEEEcCC
Q 022534 106 VK-YPFFLVVQGFLVG-SYGLTWALKNPSRISKLAILNSP 143 (295)
Q Consensus 106 ~~-~~~~lv~~G~~~G-~~~~~~a~~~p~~v~~lil~~~p 143 (295)
++ +.++++ |+|+| .+++.++.++|+.+.+++.++++
T Consensus 92 id~~~i~l~--G~S~Gg~~a~~~a~~~p~~~~~~~~~~g~ 129 (212)
T TIGR01840 92 IDPNRVYVT--GLSAGGGMTAVLGCTYPDVFAGGASNAGL 129 (212)
T ss_pred cChhheEEE--EECHHHHHHHHHHHhCchhheEEEeecCC
Confidence 43 245665 77766 46778889999999998887654
|
This model describes a subfamily among lipases of the ab-hydrolase family. This subfamily includes bacterial depolymerases for poly(3-hydroxybutyrate) (PHB) and related polyhydroxyalkanoates (PHA), as well as acetyl xylan esterases, feruloyl esterases, and others from fungi. |
| >PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification | Back alignment and domain information |
|---|
Probab=99.30 E-value=5.9e-11 Score=98.35 Aligned_cols=198 Identities=18% Similarity=0.266 Sum_probs=103.7
Q ss_pred cchhhHHHhhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh----CCC-CceEEEEecccchH-HH
Q 022534 50 SYRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEELDKLLDVL----EVK-YPFFLVVQGFLVGS-YG 123 (295)
Q Consensus 50 ~w~~~~~~l~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~l~~~~~~l----~~~-~~~~lv~~G~~~G~-~~ 123 (295)
+|......|+++||.|+.+|.||.+.....-...-..+.. ..-.+|+.+.++.+ .++ +.+.++ |+|.|+ ++
T Consensus 2 ~f~~~~~~la~~Gy~v~~~~~rGs~g~g~~~~~~~~~~~~-~~~~~D~~~~i~~l~~~~~iD~~ri~i~--G~S~GG~~a 78 (213)
T PF00326_consen 2 SFNWNAQLLASQGYAVLVPNYRGSGGYGKDFHEAGRGDWG-QADVDDVVAAIEYLIKQYYIDPDRIGIM--GHSYGGYLA 78 (213)
T ss_dssp --SHHHHHHHTTT-EEEEEE-TTSSSSHHHHHHTTTTGTT-HHHHHHHHHHHHHHHHTTSEEEEEEEEE--EETHHHHHH
T ss_pred eeeHHHHHHHhCCEEEEEEcCCCCCccchhHHHhhhcccc-ccchhhHHHHHHHHhccccccceeEEEE--ccccccccc
Confidence 4567778898889999999999998543210000000111 12334444444443 222 224443 677665 45
Q ss_pred HHHHHhCcCccceeEEEcCCCCCCCCCchhhhhhhcccchhhhhhhHHHHHHHHHhCCCccccccccccccccccccCCc
Q 022534 124 LTWALKNPSRISKLAILNSPLTASSPLPGLFQQLRIPLLGEFTAQNAIMAERFIEAGSPYVLKLDKADVYRLPYLASSGP 203 (295)
Q Consensus 124 ~~~a~~~p~~v~~lil~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (295)
+..+.++|+++++++..++...... .... . .. +. ...+.....+.. ..
T Consensus 79 ~~~~~~~~~~f~a~v~~~g~~d~~~-~~~~-~--~~-----~~------~~~~~~~~~~~~----~~------------- 126 (213)
T PF00326_consen 79 LLAATQHPDRFKAAVAGAGVSDLFS-YYGT-T--DI-----YT------KAEYLEYGDPWD----NP------------- 126 (213)
T ss_dssp HHHHHHTCCGSSEEEEESE-SSTTC-SBHH-T--CC-----HH------HGHHHHHSSTTT----SH-------------
T ss_pred chhhcccceeeeeeeccceecchhc-cccc-c--cc-----cc------cccccccCccch----hh-------------
Confidence 5556679999998887654332211 1100 0 00 00 001111111100 00
Q ss_pred hhHHHHHHHhcchhhhhHhhhcCcCCCCCCCcEEEEEeCCCCCCCcchHHHHHhc---CCCCeEEEEecCCCCCCC-CCC
Q 022534 204 GFALLEAARKVNFKDISSRIGAGFSSGSWDKPVLVAWGISDKYLPQSVAEEFQKG---NPNVVKLQMIEGAGHMPQ-EDW 279 (295)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~---~~~~~~~~~i~~~gH~~~-~e~ 279 (295)
..+...... ....++ ..++|+|+++|++|..+|++.+.++.+. ....++++++|++||... -+.
T Consensus 127 --~~~~~~s~~---~~~~~~-------~~~~P~li~hG~~D~~Vp~~~s~~~~~~L~~~g~~~~~~~~p~~gH~~~~~~~ 194 (213)
T PF00326_consen 127 --EFYRELSPI---SPADNV-------QIKPPVLIIHGENDPRVPPSQSLRLYNALRKAGKPVELLIFPGEGHGFGNPEN 194 (213)
T ss_dssp --HHHHHHHHG---GGGGGC-------GGGSEEEEEEETTBSSSTTHHHHHHHHHHHHTTSSEEEEEETT-SSSTTSHHH
T ss_pred --hhhhhhccc---cccccc-------cCCCCEEEEccCCCCccCHHHHHHHHHHHHhcCCCEEEEEcCcCCCCCCCchh
Confidence 011111100 011110 1579999999999999999888777543 233489999999999554 445
Q ss_pred hHHHHHHHHHHHHhc
Q 022534 280 PEKVVDGLRYFFLNY 294 (295)
Q Consensus 280 p~~~~~~i~~fl~~~ 294 (295)
..+..+.+.+|++.+
T Consensus 195 ~~~~~~~~~~f~~~~ 209 (213)
T PF00326_consen 195 RRDWYERILDFFDKY 209 (213)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH
Confidence 668889999999864
|
; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B .... |
| >TIGR01839 PHA_synth_II poly(R)-hydroxyalkanoic acid synthase, class II | Back alignment and domain information |
|---|
Probab=99.27 E-value=8.1e-10 Score=101.68 Aligned_cols=228 Identities=13% Similarity=0.148 Sum_probs=126.2
Q ss_pred CCceEEEEcCCCCCCccc-----hhhHHHhhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh----
Q 022534 34 RLGTIVFLHGAPSHSYSY-----RNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEELDKLLDVL---- 104 (295)
Q Consensus 34 ~~~~vv~lHG~~~~~~~w-----~~~~~~l~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~l~~~~~~l---- 104 (295)
.+.|||+++.+--....| +-++.+|.++||+|+++|++.-+.+++ ++++++|++.+.+.++.+
T Consensus 214 ~~~PLLIVPp~INK~YIlDL~P~~SlVr~lv~qG~~VflIsW~nP~~~~r--------~~~ldDYv~~i~~Ald~V~~~t 285 (560)
T TIGR01839 214 HARPLLVVPPQINKFYIFDLSPEKSFVQYCLKNQLQVFIISWRNPDKAHR--------EWGLSTYVDALKEAVDAVRAIT 285 (560)
T ss_pred CCCcEEEechhhhhhheeecCCcchHHHHHHHcCCeEEEEeCCCCChhhc--------CCCHHHHHHHHHHHHHHHHHhc
Confidence 457999999988666666 477888888899999999998776653 246788887777777765
Q ss_pred CCCCceEEEEecccc-hHHHHH----HHHhCcC-ccceeEEEcCCCCCCCCC-chhhh---hh-----hcccchhhhhhh
Q 022534 105 EVKYPFFLVVQGFLV-GSYGLT----WALKNPS-RISKLAILNSPLTASSPL-PGLFQ---QL-----RIPLLGEFTAQN 169 (295)
Q Consensus 105 ~~~~~~~lv~~G~~~-G~~~~~----~a~~~p~-~v~~lil~~~p~~~~~~~-~~~~~---~~-----~~~~~~~~~~~~ 169 (295)
+.+ ++.++ |+++ |.+.+. +|+++++ +|++++++.+|.+..... ...+. .+ ...-.+.+. -
T Consensus 286 G~~-~vnl~--GyC~GGtl~a~~~a~~aA~~~~~~V~sltllatplDf~~~g~l~~f~~e~~~~~~e~~~~~~G~lp--g 360 (560)
T TIGR01839 286 GSR-DLNLL--GACAGGLTCAALVGHLQALGQLRKVNSLTYLVSLLDSTMESPAALFADEQTLEAAKRRSYQAGVLD--G 360 (560)
T ss_pred CCC-CeeEE--EECcchHHHHHHHHHHHhcCCCCceeeEEeeecccccCCCCcchhccChHHHHHHHHHHHhcCCcC--H
Confidence 334 46666 7755 445443 6778886 899999998887643211 11110 00 000000000 0
Q ss_pred HHHHHHHHHhC----------CCcccccc--ccccccccccccCCchhHHHHHH---Hhcchhh--hhHhhhcCcCCCCC
Q 022534 170 AIMAERFIEAG----------SPYVLKLD--KADVYRLPYLASSGPGFALLEAA---RKVNFKD--ISSRIGAGFSSGSW 232 (295)
Q Consensus 170 ~~~~~~~~~~~----------~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~--~~~~~~~~~~~~~~ 232 (295)
..+...|.-.. ..+++... ..+...+......-|+..+.+.. ....+.. .+.-.......+++
T Consensus 361 ~~ma~~F~~LrP~dliw~y~v~~yllg~~p~~fdll~Wn~D~t~lPg~~~~e~l~ly~~N~L~~pG~l~v~G~~idL~~I 440 (560)
T TIGR01839 361 SEMAKVFAWMRPNDLIWNYWVNNYLLGNEPPAFDILYWNNDTTRLPAAFHGDLLDMFKSNPLTRPDALEVCGTPIDLKKV 440 (560)
T ss_pred HHHHHHHHhcCchhhhHHHHHHHhhcCCCcchhhHHHHhCcCccchHHHHHHHHHHHhcCCCCCCCCEEECCEEechhcC
Confidence 00111111000 00101000 00111111111222343322211 1111111 00000011123578
Q ss_pred CCcEEEEEeCCCCCCCcchHHHHHhcCCCCeEEEEecCCCCCC
Q 022534 233 DKPVLVAWGISDKYLPQSVAEEFQKGNPNVVKLQMIEGAGHMP 275 (295)
Q Consensus 233 ~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~ 275 (295)
+||++++.|++|.|+|.+.+..+.+.++.+++++.. .+||.-
T Consensus 441 ~~Pvl~va~~~DHIvPw~s~~~~~~l~gs~~~fvl~-~gGHIg 482 (560)
T TIGR01839 441 KCDSFSVAGTNDHITPWDAVYRSALLLGGKRRFVLS-NSGHIQ 482 (560)
T ss_pred CCCeEEEecCcCCcCCHHHHHHHHHHcCCCeEEEec-CCCccc
Confidence 999999999999999999999999888876666666 579964
|
This model represents the class II subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs, typically with six to fourteen carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell. |
| >TIGR03502 lipase_Pla1_cef extracellular lipase, Pla-1/cef family | Back alignment and domain information |
|---|
Probab=99.26 E-value=3e-11 Score=115.39 Aligned_cols=113 Identities=12% Similarity=0.076 Sum_probs=79.4
Q ss_pred eeEEeCcEEEEEEEcCCCC-------CCCceEEEEcCCCCCCccchhhHHHhhhCCCeEEEeCCCCCCCCCCC-------
Q 022534 14 SYIKSGEYRWFVRETGSAD-------SRLGTIVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGFGFSDKP------- 79 (295)
Q Consensus 14 ~~~~~~~~~~~~~~~g~~~-------~~~~~vv~lHG~~~~~~~w~~~~~~l~~~~~~via~Dl~G~G~S~~~------- 79 (295)
.+...++.++.|...|.+. ...|+|||+||++++...|..+++.|+++||+|+++|+||||+|+..
T Consensus 421 ~~~~p~~~~i~~~~~~~g~~~~~~p~~g~P~VVllHG~~g~~~~~~~lA~~La~~Gy~VIaiDlpGHG~S~~~~~~~~~~ 500 (792)
T TIGR03502 421 LLTTPNGPVIAAFRAGTGLETFAAPTDGWPVVIYQHGITGAKENALAFAGTLAAAGVATIAIDHPLHGARSFDANASGVN 500 (792)
T ss_pred EEEecCcchhhhhhcccccccccCCCCCCcEEEEeCCCCCCHHHHHHHHHHHHhCCcEEEEeCCCCCCcccccccccccc
Confidence 3444466677666554331 12358999999999999999999999877999999999999999542
Q ss_pred --CCCCCCC---------CCCHHHHHHHHHHHHHHhC--------------C-CCceEEEEecccchHH-HHHHHH
Q 022534 80 --EKGYDDF---------DFTENEFHEELDKLLDVLE--------------V-KYPFFLVVQGFLVGSY-GLTWAL 128 (295)
Q Consensus 80 --~~~~~~~---------~~~~~~~~~~l~~~~~~l~--------------~-~~~~~lv~~G~~~G~~-~~~~a~ 128 (295)
......| ...+..++.|+..+...++ . ..+++++ |||+|++ |..++.
T Consensus 501 a~~~~~~~y~Nl~~l~~aRDn~rQ~v~Dll~L~~~l~~~~~~~~~~~~~~~~~~~~V~~l--GHSLGgiig~~~~~ 574 (792)
T TIGR03502 501 ATNANVLAYMNLASLLVARDNLRQSILDLLGLRLSLNGSALAGAPLSGINVIDGSKVSFL--GHSLGGIVGTSFIA 574 (792)
T ss_pred ccccCccceeccccccccccCHHHHHHHHHHHHHHHhcccccccccccccCCCCCcEEEE--ecCHHHHHHHHHHH
Confidence 1110011 1256788899999988886 1 1356676 7888765 555554
|
Members of this protein family are bacterial lipoproteins largely from the Gammaproteobacteria. Characterized members are expressed in extracellularly and have esterase activity. Members include the lipase Pla-1 from Aeromonas hydrophila (AF092033) and CHO cell elongation factor (cef) from Vibrio hollisae |
| >cd00707 Pancreat_lipase_like Pancreatic lipase-like enzymes | Back alignment and domain information |
|---|
Probab=99.23 E-value=2.6e-11 Score=104.29 Aligned_cols=125 Identities=15% Similarity=0.174 Sum_probs=79.1
Q ss_pred ccccceeeEEeC-cEEEEEEEcCCCCCCCceEEEEcCCCCCC-ccchhhH-HH-hhhCCCeEEEeCCCCCCCCCCCCCCC
Q 022534 8 KGREYGSYIKSG-EYRWFVRETGSADSRLGTIVFLHGAPSHS-YSYRNVM-SQ-MSDAGFHCFAPDWLGFGFSDKPEKGY 83 (295)
Q Consensus 8 ~~~~~~~~~~~~-~~~~~~~~~g~~~~~~~~vv~lHG~~~~~-~~w~~~~-~~-l~~~~~~via~Dl~G~G~S~~~~~~~ 83 (295)
.+|+.+..+..+ +..+......+ .+|++|++|||+++. ..|...+ .. |...+|+|+++|++|++.+..+.
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~f~~---~~p~vilIHG~~~~~~~~~~~~l~~~ll~~~~~nVi~vD~~~~~~~~y~~--- 84 (275)
T cd00707 11 ENPNCPQLLFADDPSSLKNSNFNP---SRPTRFIIHGWTSSGEESWISDLRKAYLSRGDYNVIVVDWGRGANPNYPQ--- 84 (275)
T ss_pred CCCCCceEecCCChhhhhhcCCCC---CCCcEEEEcCCCCCCCCcHHHHHHHHHHhcCCCEEEEEECccccccChHH---
Confidence 445666666654 33444333332 257999999999887 6786544 33 44347999999999984433211
Q ss_pred CCCCCCHHHHHHHHHHHHHHh----CCC-CceEEEEecccchH-HHHHHHHhCcCccceeEEEcC
Q 022534 84 DDFDFTENEFHEELDKLLDVL----EVK-YPFFLVVQGFLVGS-YGLTWALKNPSRISKLAILNS 142 (295)
Q Consensus 84 ~~~~~~~~~~~~~l~~~~~~l----~~~-~~~~lv~~G~~~G~-~~~~~a~~~p~~v~~lil~~~ 142 (295)
..+......+++.++++.+ +.+ +.+++| |||+|+ ++..++..+|++|++++++++
T Consensus 85 --a~~~~~~v~~~la~~l~~L~~~~g~~~~~i~lI--GhSlGa~vAg~~a~~~~~~v~~iv~LDP 145 (275)
T cd00707 85 --AVNNTRVVGAELAKFLDFLVDNTGLSLENVHLI--GHSLGAHVAGFAGKRLNGKLGRITGLDP 145 (275)
T ss_pred --HHHhHHHHHHHHHHHHHHHHHhcCCChHHEEEE--EecHHHHHHHHHHHHhcCccceeEEecC
Confidence 1123334455556665554 222 347777 777765 667777889999999999974
|
Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site. |
| >KOG1838 consensus Alpha/beta hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.20 E-value=2.5e-09 Score=94.37 Aligned_cols=106 Identities=18% Similarity=0.294 Sum_probs=65.5
Q ss_pred CCceEEEEcCCCCCC-ccch-hhHHHhhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCC---CC
Q 022534 34 RLGTIVFLHGAPSHS-YSYR-NVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEELDKLLDVLEV---KY 108 (295)
Q Consensus 34 ~~~~vv~lHG~~~~~-~~w~-~~~~~l~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~---~~ 108 (295)
..|.||++||..+++ ..+- +++....+.||+|+.+..||+|.|.-..+.. |+ .....|+.++++.+.- +.
T Consensus 124 ~~P~vvilpGltg~S~~~YVr~lv~~a~~~G~r~VVfN~RG~~g~~LtTpr~----f~-ag~t~Dl~~~v~~i~~~~P~a 198 (409)
T KOG1838|consen 124 TDPIVVILPGLTGGSHESYVRHLVHEAQRKGYRVVVFNHRGLGGSKLTTPRL----FT-AGWTEDLREVVNHIKKRYPQA 198 (409)
T ss_pred CCcEEEEecCCCCCChhHHHHHHHHHHHhCCcEEEEECCCCCCCCccCCCce----ee-cCCHHHHHHHHHHHHHhCCCC
Confidence 468999999986655 4443 5556666679999999999999998654332 11 1345677777776543 22
Q ss_pred ceEEEEecccch-HHHHHHHHhCcC--ccceeEEEcCCCCC
Q 022534 109 PFFLVVQGFLVG-SYGLTWALKNPS--RISKLAILNSPLTA 146 (295)
Q Consensus 109 ~~~lv~~G~~~G-~~~~~~a~~~p~--~v~~lil~~~p~~~ 146 (295)
+. .+.|.|+| ++-..|..+-.+ .+.+-+.+++|++.
T Consensus 199 ~l--~avG~S~Gg~iL~nYLGE~g~~~~l~~a~~v~~Pwd~ 237 (409)
T KOG1838|consen 199 PL--FAVGFSMGGNILTNYLGEEGDNTPLIAAVAVCNPWDL 237 (409)
T ss_pred ce--EEEEecchHHHHHHHhhhccCCCCceeEEEEeccchh
Confidence 33 44478776 444444433222 24444455578764
|
|
| >PF00975 Thioesterase: Thioesterase domain; InterPro: IPR001031 Thioesterase domains often occur integrated in or associated with peptide synthetases which are involved in the non-ribosomal synthesis of peptide antibiotics [] | Back alignment and domain information |
|---|
Probab=99.19 E-value=3.8e-09 Score=88.30 Aligned_cols=218 Identities=15% Similarity=0.250 Sum_probs=125.9
Q ss_pred eEEEEcCCCCCCccchhhHHHhhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCceEEEEec
Q 022534 37 TIVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEELDKLLDVLEVKYPFFLVVQG 116 (295)
Q Consensus 37 ~vv~lHG~~~~~~~w~~~~~~l~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~~lv~~G 116 (295)
+|+|+|+.+++...|..+++.|....+.|+.++.+|++....+ .-+++++++...+.+....-+.|+.|+ |
T Consensus 2 ~lf~~p~~gG~~~~y~~la~~l~~~~~~v~~i~~~~~~~~~~~-------~~si~~la~~y~~~I~~~~~~gp~~L~--G 72 (229)
T PF00975_consen 2 PLFCFPPAGGSASSYRPLARALPDDVIGVYGIEYPGRGDDEPP-------PDSIEELASRYAEAIRARQPEGPYVLA--G 72 (229)
T ss_dssp EEEEESSTTCSGGGGHHHHHHHTTTEEEEEEECSTTSCTTSHE-------ESSHHHHHHHHHHHHHHHTSSSSEEEE--E
T ss_pred eEEEEcCCccCHHHHHHHHHhCCCCeEEEEEEecCCCCCCCCC-------CCCHHHHHHHHHHHhhhhCCCCCeeeh--c
Confidence 7999999999999999999999752389999999999933322 227788888888888877666588887 7
Q ss_pred ccch-HHHHHHHH---hCcCccceeEEEcCCCCCCCCCchhhhhhhcccchhhhhhhHHHHHHHHHhCCCcccccccccc
Q 022534 117 FLVG-SYGLTWAL---KNPSRISKLAILNSPLTASSPLPGLFQQLRIPLLGEFTAQNAIMAERFIEAGSPYVLKLDKADV 192 (295)
Q Consensus 117 ~~~G-~~~~~~a~---~~p~~v~~lil~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (295)
||.| .+|..+|. ..-..+..+++++++........ ....... .. ..+.+................
T Consensus 73 ~S~Gg~lA~E~A~~Le~~G~~v~~l~liD~~~p~~~~~~-~~~~~~~---~~-------~~~~~~~~~~~~~~~~~~~~~ 141 (229)
T PF00975_consen 73 WSFGGILAFEMARQLEEAGEEVSRLILIDSPPPSIKERP-RSREPSD---EQ-------FIEELRRIGGTPDASLEDEEL 141 (229)
T ss_dssp ETHHHHHHHHHHHHHHHTT-SESEEEEESCSSTTCHSCH-HHHHCHH---HH-------HHHHHHHHCHHHHHHCHHHHH
T ss_pred cCccHHHHHHHHHHHHHhhhccCceEEecCCCCCcccch-hhhhhhH---HH-------HHHHHHHhcCCchhhhcCHHH
Confidence 7765 46766664 24456889999986543211111 0000000 00 000000000000000000000
Q ss_pred ccccccccCCchhHHHHHHHhcchhhhhHhhhcC-cC-CCCCCCcEEEEEeCCCCCCCcc---hHHHHHhcCCCCeEEEE
Q 022534 193 YRLPYLASSGPGFALLEAARKVNFKDISSRIGAG-FS-SGSWDKPVLVAWGISDKYLPQS---VAEEFQKGNPNVVKLQM 267 (295)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~P~l~i~G~~D~~~~~~---~~~~~~~~~~~~~~~~~ 267 (295)
. ..+...+. +....+... .. ...-.+|.++....+|+..... ...++.+..+..++++.
T Consensus 142 ~-----------~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~~ 205 (229)
T PF00975_consen 142 L-----------ARLLRALR-----DDFQALENYSIRPIDKQKVPITLFYALDDPLVSMDRLEEADRWWDYTSGDVEVHD 205 (229)
T ss_dssp H-----------HHHHHHHH-----HHHHHHHTCS-TTSSSESSEEEEEEECSSSSSSHHCGGHHCHHHGCBSSSEEEEE
T ss_pred H-----------HHHHHHHH-----HHHHHHhhccCCccccCCCcEEEEecCCCccccchhhhhHHHHHHhcCCCcEEEE
Confidence 0 00111110 000001000 00 0011578999999999877554 34446777777678889
Q ss_pred ecCCCCCCCCC-ChHHHHHHHHHHH
Q 022534 268 IEGAGHMPQED-WPEKVVDGLRYFF 291 (295)
Q Consensus 268 i~~~gH~~~~e-~p~~~~~~i~~fl 291 (295)
++| +|..++. +..++.+.|.++|
T Consensus 206 v~G-~H~~~l~~~~~~i~~~I~~~~ 229 (229)
T PF00975_consen 206 VPG-DHFSMLKPHVAEIAEKIAEWL 229 (229)
T ss_dssp ESS-ETTGHHSTTHHHHHHHHHHHH
T ss_pred EcC-CCcEecchHHHHHHHHHhccC
Confidence 975 9988776 7788989888875
|
Thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates.; GO: 0016788 hydrolase activity, acting on ester bonds, 0009058 biosynthetic process; PDB: 2RON_A 2K2Q_B 3LCR_B 2HFJ_B 1MNQ_A 1MN6_B 1MNA_B 2HFK_B 2H7Y_B 2H7X_A .... |
| >PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases | Back alignment and domain information |
|---|
Probab=99.16 E-value=1.9e-10 Score=95.58 Aligned_cols=181 Identities=22% Similarity=0.266 Sum_probs=96.4
Q ss_pred CCCceEEEEcCCCCCCccchhhHH-HhhhCCCeEEEeCCCC------CCC---CCCCCCCCC-CCCC---CHHHHHHHHH
Q 022534 33 SRLGTIVFLHGAPSHSYSYRNVMS-QMSDAGFHCFAPDWLG------FGF---SDKPEKGYD-DFDF---TENEFHEELD 98 (295)
Q Consensus 33 ~~~~~vv~lHG~~~~~~~w~~~~~-~l~~~~~~via~Dl~G------~G~---S~~~~~~~~-~~~~---~~~~~~~~l~ 98 (295)
+.++.||||||+|++...|..... .+.....+++++.=|- .|. +=-+....+ .... .++.-++.+.
T Consensus 12 ~~~~lvi~LHG~G~~~~~~~~~~~~~~~~~~~~~i~p~ap~~~~~~~~g~~~~~Wf~~~~~~~~~~~~~~~i~~s~~~l~ 91 (216)
T PF02230_consen 12 KAKPLVILLHGYGDSEDLFALLAELNLALPNTRFISPRAPSRPVTVPGGYRMPAWFDIYDFDPEGPEDEAGIEESAERLD 91 (216)
T ss_dssp T-SEEEEEE--TTS-HHHHHHHHHHHTCSTTEEEEEE---EEE-GGGTT-EEE-SS-BSCSSSSSEB-HHHHHHHHHHHH
T ss_pred CCceEEEEECCCCCCcchhHHHHhhcccCCceEEEeccCCCCCcccccccCCCceeeccCCCcchhhhHHHHHHHHHHHH
Confidence 346799999999999977766655 2222357777764331 232 110000000 0001 1223344555
Q ss_pred HHHHHh---CCC-CceEEEEecccch-HHHHHHHHhCcCccceeEEEcCCCCCCCCCchhhhhhhcccchhhhhhhHHHH
Q 022534 99 KLLDVL---EVK-YPFFLVVQGFLVG-SYGLTWALKNPSRISKLAILNSPLTASSPLPGLFQQLRIPLLGEFTAQNAIMA 173 (295)
Q Consensus 99 ~~~~~l---~~~-~~~~lv~~G~~~G-~~~~~~a~~~p~~v~~lil~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (295)
++++.. +++ +.++|. |+|-| ++++.+++++|+.+.+++.+++......
T Consensus 92 ~li~~~~~~~i~~~ri~l~--GFSQGa~~al~~~l~~p~~~~gvv~lsG~~~~~~------------------------- 144 (216)
T PF02230_consen 92 ELIDEEVAYGIDPSRIFLG--GFSQGAAMALYLALRYPEPLAGVVALSGYLPPES------------------------- 144 (216)
T ss_dssp HHHHHHHHTT--GGGEEEE--EETHHHHHHHHHHHCTSSTSSEEEEES---TTGC-------------------------
T ss_pred HHHHHHHHcCCChhheehh--hhhhHHHHHHHHHHHcCcCcCEEEEeeccccccc-------------------------
Confidence 555532 232 235554 88865 5788899999999999998863110000
Q ss_pred HHHHHhCCCccccccccccccccccccCCchhHHHHHHHhcchhhhhHhhhcCcCCCCCCCcEEEEEeCCCCCCCcchHH
Q 022534 174 ERFIEAGSPYVLKLDKADVYRLPYLASSGPGFALLEAARKVNFKDISSRIGAGFSSGSWDKPVLVAWGISDKYLPQSVAE 253 (295)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~~~~~~~ 253 (295)
. . . +.... .-++|++++||++|+++|.+.++
T Consensus 145 --------~--~----~---------------------------~~~~~--------~~~~pi~~~hG~~D~vvp~~~~~ 175 (216)
T PF02230_consen 145 --------E--L----E---------------------------DRPEA--------LAKTPILIIHGDEDPVVPFEWAE 175 (216)
T ss_dssp --------C--C----H---------------------------CCHCC--------CCTS-EEEEEETT-SSSTHHHHH
T ss_pred --------c--c----c---------------------------ccccc--------cCCCcEEEEecCCCCcccHHHHH
Confidence 0 0 0 00000 11689999999999999987765
Q ss_pred HHHhc---CCCCeEEEEecCCCCCCCCCChHHHHHHHHHHHHh
Q 022534 254 EFQKG---NPNVVKLQMIEGAGHMPQEDWPEKVVDGLRYFFLN 293 (295)
Q Consensus 254 ~~~~~---~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 293 (295)
...+. ...+++++.+++.||... .+....+++||++
T Consensus 176 ~~~~~L~~~~~~v~~~~~~g~gH~i~----~~~~~~~~~~l~~ 214 (216)
T PF02230_consen 176 KTAEFLKAAGANVEFHEYPGGGHEIS----PEELRDLREFLEK 214 (216)
T ss_dssp HHHHHHHCTT-GEEEEEETT-SSS------HHHHHHHHHHHHH
T ss_pred HHHHHHHhcCCCEEEEEcCCCCCCCC----HHHHHHHHHHHhh
Confidence 55433 333579999999999874 4455678888875
|
; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A. |
| >PF05448 AXE1: Acetyl xylan esterase (AXE1); InterPro: IPR008391 This family consists of several bacterial acetyl xylan esterase proteins | Back alignment and domain information |
|---|
Probab=99.14 E-value=8.3e-09 Score=90.39 Aligned_cols=235 Identities=19% Similarity=0.193 Sum_probs=109.7
Q ss_pred eEEeCcEEEEEEEcCCC--CCCCceEEEEcCCCCCCccchhhHHHhhhCCCeEEEeCCCCCC-CCCCCC----CCCCCC-
Q 022534 15 YIKSGEYRWFVRETGSA--DSRLGTIVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGFG-FSDKPE----KGYDDF- 86 (295)
Q Consensus 15 ~~~~~~~~~~~~~~g~~--~~~~~~vv~lHG~~~~~~~w~~~~~~l~~~~~~via~Dl~G~G-~S~~~~----~~~~~~- 86 (295)
|-+.+|.+++..-.-+. ..+.|.||..||.++....|...+. ++..||-|+++|.||.| .|.... ....++
T Consensus 61 f~s~~g~~V~g~l~~P~~~~~~~Pavv~~hGyg~~~~~~~~~~~-~a~~G~~vl~~d~rGqg~~~~d~~~~~~~~~~g~~ 139 (320)
T PF05448_consen 61 FESFDGSRVYGWLYRPKNAKGKLPAVVQFHGYGGRSGDPFDLLP-WAAAGYAVLAMDVRGQGGRSPDYRGSSGGTLKGHI 139 (320)
T ss_dssp EEEGGGEEEEEEEEEES-SSSSEEEEEEE--TT--GGGHHHHHH-HHHTT-EEEEE--TTTSSSS-B-SSBSSS-SSSST
T ss_pred EEccCCCEEEEEEEecCCCCCCcCEEEEecCCCCCCCCcccccc-cccCCeEEEEecCCCCCCCCCCccccCCCCCccHH
Confidence 33446777766554332 3345789999999999888877665 55579999999999999 332110 000000
Q ss_pred ---------CCCHHHHHHHHHHHHHHhC----CCCceEEEEecccc-hHHHHHHHHhCcCccceeEEEcCCCCCCCCCch
Q 022534 87 ---------DFTENEFHEELDKLLDVLE----VKYPFFLVVQGFLV-GSYGLTWALKNPSRISKLAILNSPLTASSPLPG 152 (295)
Q Consensus 87 ---------~~~~~~~~~~l~~~~~~l~----~~~~~~lv~~G~~~-G~~~~~~a~~~p~~v~~lil~~~p~~~~~~~~~ 152 (295)
.|-......|+...++.+- ++. --|.+.|.|. |.+++..|+-.| +|++.+.. .|.... .+.
T Consensus 140 ~~g~~~~~e~~yyr~~~~D~~ravd~l~slpevD~-~rI~v~G~SqGG~lal~~aaLd~-rv~~~~~~-vP~l~d--~~~ 214 (320)
T PF05448_consen 140 TRGIDDNPEDYYYRRVYLDAVRAVDFLRSLPEVDG-KRIGVTGGSQGGGLALAAAALDP-RVKAAAAD-VPFLCD--FRR 214 (320)
T ss_dssp TTTTTS-TTT-HHHHHHHHHHHHHHHHHTSTTEEE-EEEEEEEETHHHHHHHHHHHHSS-T-SEEEEE-SESSSS--HHH
T ss_pred hcCccCchHHHHHHHHHHHHHHHHHHHHhCCCcCc-ceEEEEeecCchHHHHHHHHhCc-cccEEEec-CCCccc--hhh
Confidence 1111122344444444331 221 1233346665 457777777775 68877665 454321 000
Q ss_pred hhhhhhccc-chhhhhhhHHHHHHHHHhCCCccccccccccccccccccCCchhHHHHHHHhcchhhhhHhhhcCcCCCC
Q 022534 153 LFQQLRIPL-LGEFTAQNAIMAERFIEAGSPYVLKLDKADVYRLPYLASSGPGFALLEAARKVNFKDISSRIGAGFSSGS 231 (295)
Q Consensus 153 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (295)
.+.... ...+. + ..+|+....+.. .......+.+.-.+.... +++
T Consensus 215 ---~~~~~~~~~~y~---~--~~~~~~~~d~~~-----------------~~~~~v~~~L~Y~D~~nf---------A~r 260 (320)
T PF05448_consen 215 ---ALELRADEGPYP---E--IRRYFRWRDPHH-----------------EREPEVFETLSYFDAVNF---------ARR 260 (320)
T ss_dssp ---HHHHT--STTTH---H--HHHHHHHHSCTH-----------------CHHHHHHHHHHTT-HHHH---------GGG
T ss_pred ---hhhcCCccccHH---H--HHHHHhccCCCc-----------------ccHHHHHHHHhhhhHHHH---------HHH
Confidence 000000 00000 0 011111000000 000011121111111111 126
Q ss_pred CCCcEEEEEeCCCCCCCcchHHHHHhcCCCCeEEEEecCCCCCCCCCChHHHHHHHHHHHH
Q 022534 232 WDKPVLVAWGISDKYLPQSVAEEFQKGNPNVVKLQMIEGAGHMPQEDWPEKVVDGLRYFFL 292 (295)
Q Consensus 232 ~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~ 292 (295)
++||+++-.|=.|+++|+...--.++.++..+++.++|..||....+. -.+...+||.
T Consensus 261 i~~pvl~~~gl~D~~cPP~t~fA~yN~i~~~K~l~vyp~~~He~~~~~---~~~~~~~~l~ 318 (320)
T PF05448_consen 261 IKCPVLFSVGLQDPVCPPSTQFAAYNAIPGPKELVVYPEYGHEYGPEF---QEDKQLNFLK 318 (320)
T ss_dssp --SEEEEEEETT-SSS-HHHHHHHHCC--SSEEEEEETT--SSTTHHH---HHHHHHHHHH
T ss_pred cCCCEEEEEecCCCCCCchhHHHHHhccCCCeeEEeccCcCCCchhhH---HHHHHHHHHh
Confidence 789999999999999999988778888887789999999999753322 1555666664
|
Acetyl xylan esterases are enzymes that hydrolyse the ester linkages of the acetyl groups in position 2 and/or 3 of the xylose moieties of natural acetylated xylan from hardwood. These enzymes are one of the accessory enzymes which are part of the xylanolytic system, together with xylanases, beta-xylosidases, alpha-arabinofuranosidases and methylglucuronidases; these are all required for the complete hydrolysis of xylan [].; PDB: 1VLQ_H 3M81_E 3M82_D 3M83_C 3FCY_A 1ODS_F 1ODT_C 1L7A_A 3FYT_A 2XLB_F .... |
| >TIGR00976 /NonD putative hydrolase, CocE/NonD family | Back alignment and domain information |
|---|
Probab=99.10 E-value=4.7e-10 Score=105.93 Aligned_cols=117 Identities=13% Similarity=0.021 Sum_probs=80.4
Q ss_pred CcEEEEEEEcCCC-CCCCceEEEEcCCCCCCc---cch-hhHHHhhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCCHHHH
Q 022534 19 GEYRWFVRETGSA-DSRLGTIVFLHGAPSHSY---SYR-NVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEF 93 (295)
Q Consensus 19 ~~~~~~~~~~g~~-~~~~~~vv~lHG~~~~~~---~w~-~~~~~l~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~ 93 (295)
+|.++++..+.+. ..+.|+||++||++.+.. .|. .....|+++||.|+++|+||||.|+...... + ...
T Consensus 5 DG~~L~~~~~~P~~~~~~P~Il~~~gyg~~~~~~~~~~~~~~~~l~~~Gy~vv~~D~RG~g~S~g~~~~~-----~-~~~ 78 (550)
T TIGR00976 5 DGTRLAIDVYRPAGGGPVPVILSRTPYGKDAGLRWGLDKTEPAWFVAQGYAVVIQDTRGRGASEGEFDLL-----G-SDE 78 (550)
T ss_pred CCCEEEEEEEecCCCCCCCEEEEecCCCCchhhccccccccHHHHHhCCcEEEEEeccccccCCCceEec-----C-ccc
Confidence 6777876666442 234689999999987653 232 3456677789999999999999999753221 1 345
Q ss_pred HHHHHHHHHHhCC----CCceEEEEecccchH-HHHHHHHhCcCccceeEEEcCC
Q 022534 94 HEELDKLLDVLEV----KYPFFLVVQGFLVGS-YGLTWALKNPSRISKLAILNSP 143 (295)
Q Consensus 94 ~~~l~~~~~~l~~----~~~~~lv~~G~~~G~-~~~~~a~~~p~~v~~lil~~~p 143 (295)
++|+.++++.+.. +.++.++ |+|.|+ +++.+|..+|+++++++..++.
T Consensus 79 ~~D~~~~i~~l~~q~~~~~~v~~~--G~S~GG~~a~~~a~~~~~~l~aiv~~~~~ 131 (550)
T TIGR00976 79 AADGYDLVDWIAKQPWCDGNVGML--GVSYLAVTQLLAAVLQPPALRAIAPQEGV 131 (550)
T ss_pred chHHHHHHHHHHhCCCCCCcEEEE--EeChHHHHHHHHhccCCCceeEEeecCcc
Confidence 6677777776522 2346665 677654 5677788899999999876543
|
This model represents a protein subfamily that includes the cocaine esterase CocE, several glutaryl-7-ACA acylases, and the putative diester hydrolase NonD of Streptomyces griseus (all hydrolases). This family shows extensive, low-level similarity to a family of xaa-pro dipeptidyl-peptidases, and local similarity by PSI-BLAST to many other hydrolases. |
| >PF01738 DLH: Dienelactone hydrolase family; InterPro: IPR002925 Dienelactone hydrolases play a crucial role in chlorocatechol degradation via the modified ortho cleavage pathway | Back alignment and domain information |
|---|
Probab=99.09 E-value=5.2e-09 Score=87.05 Aligned_cols=182 Identities=19% Similarity=0.283 Sum_probs=100.7
Q ss_pred CCceEEEEcCCCCCCccchhhHHHhhhCCCeEEEeCCCCCCCCCCCCCCCCCCCC------CHHHHHHHHHHHHHHhCCC
Q 022534 34 RLGTIVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDF------TENEFHEELDKLLDVLEVK 107 (295)
Q Consensus 34 ~~~~vv~lHG~~~~~~~w~~~~~~l~~~~~~via~Dl~G~G~S~~~~~~~~~~~~------~~~~~~~~l~~~~~~l~~~ 107 (295)
+.|.||++|++.+-...-+.+++.|++.||.|++||+-+-..............+ ..+....++...++.+.-.
T Consensus 13 ~~~~Vvv~~d~~G~~~~~~~~ad~lA~~Gy~v~~pD~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~~l~~~ 92 (218)
T PF01738_consen 13 PRPAVVVIHDIFGLNPNIRDLADRLAEEGYVVLAPDLFGGRGAPPSDPEEAFAAMRELFAPRPEQVAADLQAAVDYLRAQ 92 (218)
T ss_dssp SEEEEEEE-BTTBS-HHHHHHHHHHHHTT-EEEEE-CCCCTS--CCCHHCHHHHHHHCHHHSHHHHHHHHHHHHHHHHCT
T ss_pred CCCEEEEEcCCCCCchHHHHHHHHHHhcCCCEEecccccCCCCCccchhhHHHHHHHHHhhhHHHHHHHHHHHHHHHHhc
Confidence 4689999999887666666888999999999999998643331111100000000 0123456665556655321
Q ss_pred -----CceEEEEecccch-HHHHHHHHhCcCccceeEEEcCCCCCCCCCchhhhhhhcccchhhhhhhHHHHHHHHHhCC
Q 022534 108 -----YPFFLVVQGFLVG-SYGLTWALKNPSRISKLAILNSPLTASSPLPGLFQQLRIPLLGEFTAQNAIMAERFIEAGS 181 (295)
Q Consensus 108 -----~~~~lv~~G~~~G-~~~~~~a~~~p~~v~~lil~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (295)
+++.++ |+++| .+++.+|.+. +.+++.+..-++.. + ..
T Consensus 93 ~~~~~~kig~v--Gfc~GG~~a~~~a~~~-~~~~a~v~~yg~~~-----~---------------~~------------- 136 (218)
T PF01738_consen 93 PEVDPGKIGVV--GFCWGGKLALLLAARD-PRVDAAVSFYGGSP-----P---------------PP------------- 136 (218)
T ss_dssp TTCEEEEEEEE--EETHHHHHHHHHHCCT-TTSSEEEEES-SSS-----G---------------GG-------------
T ss_pred cccCCCcEEEE--EEecchHHhhhhhhhc-cccceEEEEcCCCC-----C---------------Cc-------------
Confidence 234454 77765 5677766666 57887776531000 0 00
Q ss_pred CccccccccccccccccccCCchhHHHHHHHhcchhhhhHhhhcCcCCCCCCCcEEEEEeCCCCCCCcchHHHHHhcC--
Q 022534 182 PYVLKLDKADVYRLPYLASSGPGFALLEAARKVNFKDISSRIGAGFSSGSWDKPVLVAWGISDKYLPQSVAEEFQKGN-- 259 (295)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~-- 259 (295)
. . +.. .++++|+++++|++|+.++.+....+.+.+
T Consensus 137 ------------------------~-~---------~~~---------~~~~~P~l~~~g~~D~~~~~~~~~~~~~~l~~ 173 (218)
T PF01738_consen 137 ------------------------P-L---------EDA---------PKIKAPVLILFGENDPFFPPEEVEALEEALKA 173 (218)
T ss_dssp ------------------------H-H---------HHG---------GG--S-EEEEEETT-TTS-HHHHHHHHHHHHC
T ss_pred ------------------------c-h---------hhh---------cccCCCEeecCccCCCCCChHHHHHHHHHHHh
Confidence 0 0 000 034799999999999999988766655443
Q ss_pred -CCCeEEEEecCCCCCCCCCC--------hHHHHHHHHHHHHhc
Q 022534 260 -PNVVKLQMIEGAGHMPQEDW--------PEKVVDGLRYFFLNY 294 (295)
Q Consensus 260 -~~~~~~~~i~~~gH~~~~e~--------p~~~~~~i~~fl~~~ 294 (295)
....+++++||++|-.+... .++..+.+.+||.++
T Consensus 174 ~~~~~~~~~y~ga~HgF~~~~~~~~~~~aa~~a~~~~~~ff~~~ 217 (218)
T PF01738_consen 174 AGVDVEVHVYPGAGHGFANPSRPPYDPAAAEDAWQRTLAFFKRH 217 (218)
T ss_dssp TTTTEEEEEETT--TTTTSTTSTT--HHHHHHHHHHHHHHHCC-
T ss_pred cCCcEEEEECCCCcccccCCCCcccCHHHHHHHHHHHHHHHHhc
Confidence 44589999999999665432 235566677777653
|
Enzymes induced in 4-fluorobenzoate-utilizing bacteria have been classified into three groups on the basis of their specificity towards cis- and trans-dienelactone []. Some proteins contain repeated small fragments of this domain (for example rat kan-1 protein).; GO: 0016787 hydrolase activity; PDB: 1GGV_A 1ZIY_A 1ZI6_A 1ZIC_A 1ZJ5_A 1ZI8_A 1ZJ4_A 1ZI9_A 1ZIX_A 3F67_A. |
| >PRK10162 acetyl esterase; Provisional | Back alignment and domain information |
|---|
Probab=99.07 E-value=1.2e-08 Score=89.73 Aligned_cols=110 Identities=14% Similarity=0.113 Sum_probs=66.7
Q ss_pred EEEEEcCCCCCCCceEEEEcCCC---CCCccchhhHHHhhh-CCCeEEEeCCCCCCCCCCCCCCCCCCCCCHHHHHH---
Q 022534 23 WFVRETGSADSRLGTIVFLHGAP---SHSYSYRNVMSQMSD-AGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHE--- 95 (295)
Q Consensus 23 ~~~~~~g~~~~~~~~vv~lHG~~---~~~~~w~~~~~~l~~-~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~--- 95 (295)
+.+..+.+..+..|+||++||++ ++...|..+...|+. .|+.|+++|.|.......+. .+++...
T Consensus 69 i~~~~y~P~~~~~p~vv~~HGGg~~~g~~~~~~~~~~~la~~~g~~Vv~vdYrlape~~~p~--------~~~D~~~a~~ 140 (318)
T PRK10162 69 VETRLYYPQPDSQATLFYLHGGGFILGNLDTHDRIMRLLASYSGCTVIGIDYTLSPEARFPQ--------AIEEIVAVCC 140 (318)
T ss_pred eEEEEECCCCCCCCEEEEEeCCcccCCCchhhhHHHHHHHHHcCCEEEEecCCCCCCCCCCC--------cHHHHHHHHH
Confidence 33344433333357999999976 566778888888876 48999999999654332211 2344333
Q ss_pred HHHHHHHHhCCC-CceEEEEecccch-HHHHHHHHhC------cCccceeEEEcC
Q 022534 96 ELDKLLDVLEVK-YPFFLVVQGFLVG-SYGLTWALKN------PSRISKLAILNS 142 (295)
Q Consensus 96 ~l~~~~~~l~~~-~~~~lv~~G~~~G-~~~~~~a~~~------p~~v~~lil~~~ 142 (295)
.+.+..+.++++ +.++++ |+|+| .+++.+++.. +.++++++++.+
T Consensus 141 ~l~~~~~~~~~d~~~i~l~--G~SaGG~la~~~a~~~~~~~~~~~~~~~~vl~~p 193 (318)
T PRK10162 141 YFHQHAEDYGINMSRIGFA--GDSAGAMLALASALWLRDKQIDCGKVAGVLLWYG 193 (318)
T ss_pred HHHHhHHHhCCChhHEEEE--EECHHHHHHHHHHHHHHhcCCCccChhheEEECC
Confidence 333334456654 335554 66665 5666665432 357888887743
|
|
| >COG0400 Predicted esterase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.06 E-value=2.3e-09 Score=87.51 Aligned_cols=173 Identities=20% Similarity=0.317 Sum_probs=105.7
Q ss_pred CCCCceEEEEcCCCCCCccchhhHHHhhhCCCeEEEeCCCCCCCCCCCCC-----CCCCCCCCHH-------HHHHHHHH
Q 022534 32 DSRLGTIVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGFGFSDKPEK-----GYDDFDFTEN-------EFHEELDK 99 (295)
Q Consensus 32 ~~~~~~vv~lHG~~~~~~~w~~~~~~l~~~~~~via~Dl~G~G~S~~~~~-----~~~~~~~~~~-------~~~~~l~~ 99 (295)
++..|+||++||+|++...+-.....+.. +++++.+ | |.+..... -++...|..+ .+++.+.+
T Consensus 15 ~p~~~~iilLHG~Ggde~~~~~~~~~~~P-~~~~is~--r--G~v~~~g~~~~f~~~~~~~~d~edl~~~~~~~~~~l~~ 89 (207)
T COG0400 15 DPAAPLLILLHGLGGDELDLVPLPELILP-NATLVSP--R--GPVAENGGPRFFRRYDEGSFDQEDLDLETEKLAEFLEE 89 (207)
T ss_pred CCCCcEEEEEecCCCChhhhhhhhhhcCC-CCeEEcC--C--CCccccCcccceeecCCCccchhhHHHHHHHHHHHHHH
Confidence 34456899999999998888776555554 4666543 3 32221000 0001112222 34555555
Q ss_pred HHHHhCCC-CceEEEEecccch-HHHHHHHHhCcCccceeEEEcCCCCCCCCCchhhhhhhcccchhhhhhhHHHHHHHH
Q 022534 100 LLDVLEVK-YPFFLVVQGFLVG-SYGLTWALKNPSRISKLAILNSPLTASSPLPGLFQQLRIPLLGEFTAQNAIMAERFI 177 (295)
Q Consensus 100 ~~~~l~~~-~~~~lv~~G~~~G-~~~~~~a~~~p~~v~~lil~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (295)
..++.+++ +.++++ |+|=| ++++...+++|+.+++.++++ |+.......
T Consensus 90 ~~~~~gi~~~~ii~~--GfSqGA~ial~~~l~~~~~~~~ail~~-g~~~~~~~~-------------------------- 140 (207)
T COG0400 90 LAEEYGIDSSRIILI--GFSQGANIALSLGLTLPGLFAGAILFS-GMLPLEPEL-------------------------- 140 (207)
T ss_pred HHHHhCCChhheEEE--ecChHHHHHHHHHHhCchhhccchhcC-CcCCCCCcc--------------------------
Confidence 66666663 234454 88755 578888899999999998874 322110000
Q ss_pred HhCCCccccccccccccccccccCCchhHHHHHHHhcchhhhhHhhhcCcCCCCCCCcEEEEEeCCCCCCCcchHHHHHh
Q 022534 178 EAGSPYVLKLDKADVYRLPYLASSGPGFALLEAARKVNFKDISSRIGAGFSSGSWDKPVLVAWGISDKYLPQSVAEEFQK 257 (295)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~ 257 (295)
. .+ .-..|+++++|++|+++|...+.++++
T Consensus 141 ---~-----------------------------------~~------------~~~~pill~hG~~Dpvvp~~~~~~l~~ 170 (207)
T COG0400 141 ---L-----------------------------------PD------------LAGTPILLSHGTEDPVVPLALAEALAE 170 (207)
T ss_pred ---c-----------------------------------cc------------cCCCeEEEeccCcCCccCHHHHHHHHH
Confidence 0 00 115899999999999999888766654
Q ss_pred c---CCCCeEEEEecCCCCCCCCCChHHHHHHHHHHHHh
Q 022534 258 G---NPNVVKLQMIEGAGHMPQEDWPEKVVDGLRYFFLN 293 (295)
Q Consensus 258 ~---~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 293 (295)
. ...+++...++ .||....| -.+.+++|+.+
T Consensus 171 ~l~~~g~~v~~~~~~-~GH~i~~e----~~~~~~~wl~~ 204 (207)
T COG0400 171 YLTASGADVEVRWHE-GGHEIPPE----ELEAARSWLAN 204 (207)
T ss_pred HHHHcCCCEEEEEec-CCCcCCHH----HHHHHHHHHHh
Confidence 3 33357889998 89987444 44566667765
|
|
| >PF06500 DUF1100: Alpha/beta hydrolase of unknown function (DUF1100); InterPro: IPR010520 Proteins in this entry display esterase activity toward pNP-butyrate [] | Back alignment and domain information |
|---|
Probab=99.01 E-value=1.9e-08 Score=89.36 Aligned_cols=216 Identities=19% Similarity=0.200 Sum_probs=103.1
Q ss_pred CCCceEEEEcCCCCCCcc-chhhHHHhhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCC-C-Cc
Q 022534 33 SRLGTIVFLHGAPSHSYS-YRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEELDKLLDVLEV-K-YP 109 (295)
Q Consensus 33 ~~~~~vv~lHG~~~~~~~-w~~~~~~l~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~-~-~~ 109 (295)
.+.|+||++=|.-+-... |..+.++|+.+|+.++++|+||-|.|.+-.-. .++ +.+.+.|.+.+..+.. + ..
T Consensus 188 ~p~P~VIv~gGlDs~qeD~~~l~~~~l~~rGiA~LtvDmPG~G~s~~~~l~---~D~--~~l~~aVLd~L~~~p~VD~~R 262 (411)
T PF06500_consen 188 KPYPTVIVCGGLDSLQEDLYRLFRDYLAPRGIAMLTVDMPGQGESPKWPLT---QDS--SRLHQAVLDYLASRPWVDHTR 262 (411)
T ss_dssp S-EEEEEEE--TTS-GGGGHHHHHCCCHHCT-EEEEE--TTSGGGTTT-S----S-C--CHHHHHHHHHHHHSTTEEEEE
T ss_pred CCCCEEEEeCCcchhHHHHHHHHHHHHHhCCCEEEEEccCCCcccccCCCC---cCH--HHHHHHHHHHHhcCCccChhh
Confidence 334555555555444444 44555678888999999999999999753211 122 3455666666665532 2 12
Q ss_pred eEEEEecccch-HHHHHHHHhCcCccceeEEEcCCCCCCCCCchhhhhhhcccchhhhhhhHHHHHHHHHhCCCcccccc
Q 022534 110 FFLVVQGFLVG-SYGLTWALKNPSRISKLAILNSPLTASSPLPGLFQQLRIPLLGEFTAQNAIMAERFIEAGSPYVLKLD 188 (295)
Q Consensus 110 ~~lv~~G~~~G-~~~~~~a~~~p~~v~~lil~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (295)
+.++ |.|.| .+|..+|..+++|++++|..+++....-..+. ...+.|.+ ..+ .+..++ +....
T Consensus 263 V~~~--G~SfGGy~AvRlA~le~~RlkavV~~Ga~vh~~ft~~~--~~~~~P~m----y~d-~LA~rl---G~~~~---- 326 (411)
T PF06500_consen 263 VGAW--GFSFGGYYAVRLAALEDPRLKAVVALGAPVHHFFTDPE--WQQRVPDM----YLD-VLASRL---GMAAV---- 326 (411)
T ss_dssp EEEE--EETHHHHHHHHHHHHTTTT-SEEEEES---SCGGH-HH--HHTTS-HH----HHH-HHHHHC---T-SCE----
T ss_pred eEEE--EeccchHHHHHHHHhcccceeeEeeeCchHhhhhccHH--HHhcCCHH----HHH-HHHHHh---CCccC----
Confidence 3333 66654 56788888888999999988765432100000 00111211 000 011110 10000
Q ss_pred ccccccccccccCCchhHHHHHHHhcchhhhhHhhhcCcC-CCCCCCcEEEEEeCCCCCCCcchHHHHHhcCCCCeEEEE
Q 022534 189 KADVYRLPYLASSGPGFALLEAARKVNFKDISSRIGAGFS-SGSWDKPVLVAWGISDKYLPQSVAEEFQKGNPNVVKLQM 267 (295)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~ 267 (295)
+ ...+...+....++. .++- ..+..+|+|.+.|++|+++|.+...-++..... .+...
T Consensus 327 --~------------~~~l~~el~~~SLk~------qGlL~~rr~~~plL~i~~~~D~v~P~eD~~lia~~s~~-gk~~~ 385 (411)
T PF06500_consen 327 --S------------DESLRGELNKFSLKT------QGLLSGRRCPTPLLAINGEDDPVSPIEDSRLIAESSTD-GKALR 385 (411)
T ss_dssp ---------------HHHHHHHGGGGSTTT------TTTTTSS-BSS-EEEEEETT-SSS-HHHHHHHHHTBTT--EEEE
T ss_pred --C------------HHHHHHHHHhcCcch------hccccCCCCCcceEEeecCCCCCCCHHHHHHHHhcCCC-Cceee
Confidence 0 011111112122211 1111 235689999999999999998887777765544 47777
Q ss_pred ecCCCCCCCCCChHHHHHHHHHHHHh
Q 022534 268 IEGAGHMPQEDWPEKVVDGLRYFFLN 293 (295)
Q Consensus 268 i~~~gH~~~~e~p~~~~~~i~~fl~~ 293 (295)
|+... .-+.-+.-...+.+||+.
T Consensus 386 ~~~~~---~~~gy~~al~~~~~Wl~~ 408 (411)
T PF06500_consen 386 IPSKP---LHMGYPQALDEIYKWLED 408 (411)
T ss_dssp E-SSS---HHHHHHHHHHHHHHHHHH
T ss_pred cCCCc---cccchHHHHHHHHHHHHH
Confidence 77533 112234566778888875
|
This entry also includes 2,6-dihydropseudooxynicotine hydrolase which has a role in nicotine catabolism by cleaving a C-C bond in 2,6-dihydroxypseudooxyicotine [, ].; PDB: 3OUR_A 3MVE_B 2JBW_C. |
| >PF06821 Ser_hydrolase: Serine hydrolase; InterPro: IPR010662 This family contains a number of hypothetical bacterial proteins of unknown function, which may be cytosolic | Back alignment and domain information |
|---|
Probab=99.00 E-value=7.6e-09 Score=82.39 Aligned_cols=153 Identities=21% Similarity=0.429 Sum_probs=89.0
Q ss_pred EEEEcCCCCCC-ccchhhHHH-hhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCceEEEEe
Q 022534 38 IVFLHGAPSHS-YSYRNVMSQ-MSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEELDKLLDVLEVKYPFFLVVQ 115 (295)
Q Consensus 38 vv~lHG~~~~~-~~w~~~~~~-l~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~~lv~~ 115 (295)
|+++||++++. .-|...++. |.. .++|-.+|+ +.| ..+.....+.+-+.. .+++++||
T Consensus 1 v~IvhG~~~s~~~HW~~wl~~~l~~-~~~V~~~~~------~~P---------~~~~W~~~l~~~i~~--~~~~~ilV-- 60 (171)
T PF06821_consen 1 VLIVHGYGGSPPDHWQPWLERQLEN-SVRVEQPDW------DNP---------DLDEWVQALDQAIDA--IDEPTILV-- 60 (171)
T ss_dssp EEEE--TTSSTTTSTHHHHHHHHTT-SEEEEEC--------TS-----------HHHHHHHHHHCCHC---TTTEEEE--
T ss_pred CEEeCCCCCCCccHHHHHHHHhCCC-CeEEecccc------CCC---------CHHHHHHHHHHHHhh--cCCCeEEE--
Confidence 68899997654 457655544 654 488888777 332 224455555544443 35567777
Q ss_pred cccchHHH-HHHH-HhCcCccceeEEEcCCCCCCCCCchhhhhhhcccchhhhhhhHHHHHHHHHhCCCccccccccccc
Q 022534 116 GFLVGSYG-LTWA-LKNPSRISKLAILNSPLTASSPLPGLFQQLRIPLLGEFTAQNAIMAERFIEAGSPYVLKLDKADVY 193 (295)
Q Consensus 116 G~~~G~~~-~~~a-~~~p~~v~~lil~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (295)
|||.|+++ +.++ ...+.+|++++|++ |.... ... . ..+... ...
T Consensus 61 aHSLGc~~~l~~l~~~~~~~v~g~lLVA-p~~~~---~~~-~--~~~~~~---------------------------~f~ 106 (171)
T PF06821_consen 61 AHSLGCLTALRWLAEQSQKKVAGALLVA-PFDPD---DPE-P--FPPELD---------------------------GFT 106 (171)
T ss_dssp EETHHHHHHHHHHHHTCCSSEEEEEEES---SCG---CHH-C--CTCGGC---------------------------CCT
T ss_pred EeCHHHHHHHHHHhhcccccccEEEEEc-CCCcc---ccc-c--hhhhcc---------------------------ccc
Confidence 66788764 5566 67888999999985 44321 000 0 000000 000
Q ss_pred cccccccCCchhHHHHHHHhcchhhhhHhhhcCcCCCCCCCcEEEEEeCCCCCCCcchHHHHHhcCCCCeEEEEecCCCC
Q 022534 194 RLPYLASSGPGFALLEAARKVNFKDISSRIGAGFSSGSWDKPVLVAWGISDKYLPQSVAEEFQKGNPNVVKLQMIEGAGH 273 (295)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH 273 (295)
..+ . . ...+|.++|.+++|++++.+.+.++++... +++++++++||
T Consensus 107 ~~p---------------------~--~---------~l~~~~~viaS~nDp~vp~~~a~~~A~~l~--a~~~~~~~~GH 152 (171)
T PF06821_consen 107 PLP---------------------R--D---------PLPFPSIVIASDNDPYVPFERAQRLAQRLG--AELIILGGGGH 152 (171)
T ss_dssp TSH---------------------C--C---------HHHCCEEEEEETTBSSS-HHHHHHHHHHHT---EEEEETS-TT
T ss_pred cCc---------------------c--c---------ccCCCeEEEEcCCCCccCHHHHHHHHHHcC--CCeEECCCCCC
Confidence 000 0 0 124777999999999999999999999884 69999999999
Q ss_pred CCCCC
Q 022534 274 MPQED 278 (295)
Q Consensus 274 ~~~~e 278 (295)
+.-.+
T Consensus 153 f~~~~ 157 (171)
T PF06821_consen 153 FNAAS 157 (171)
T ss_dssp SSGGG
T ss_pred ccccc
Confidence 87554
|
The Crystal Structure Of The Yden Gene Product Swiss:P96671 from B. Subtilis has been solved. The structure shows an alpha-beta hydrolase fold suggesting an enzymatic function for these proteins [].; GO: 0016787 hydrolase activity; PDB: 3BDV_B 2QS9_A 1UXO_A. |
| >PRK10252 entF enterobactin synthase subunit F; Provisional | Back alignment and domain information |
|---|
Probab=98.98 E-value=1.6e-08 Score=104.94 Aligned_cols=97 Identities=13% Similarity=0.185 Sum_probs=79.2
Q ss_pred ceEEEEcCCCCCCccchhhHHHhhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCceEEEEe
Q 022534 36 GTIVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEELDKLLDVLEVKYPFFLVVQ 115 (295)
Q Consensus 36 ~~vv~lHG~~~~~~~w~~~~~~l~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~~lv~~ 115 (295)
++++++||+++++..|..+++.|.. +++|+++|+||+|.+... .++++++++++.+.++.+....+++++
T Consensus 1069 ~~l~~lh~~~g~~~~~~~l~~~l~~-~~~v~~~~~~g~~~~~~~-------~~~l~~la~~~~~~i~~~~~~~p~~l~-- 1138 (1296)
T PRK10252 1069 PTLFCFHPASGFAWQFSVLSRYLDP-QWSIYGIQSPRPDGPMQT-------ATSLDEVCEAHLATLLEQQPHGPYHLL-- 1138 (1296)
T ss_pred CCeEEecCCCCchHHHHHHHHhcCC-CCcEEEEECCCCCCCCCC-------CCCHHHHHHHHHHHHHhhCCCCCEEEE--
Confidence 5899999999999999999999975 799999999999866321 347899999999999987656678787
Q ss_pred cccch-HHHHHHHHh---CcCccceeEEEcC
Q 022534 116 GFLVG-SYGLTWALK---NPSRISKLAILNS 142 (295)
Q Consensus 116 G~~~G-~~~~~~a~~---~p~~v~~lil~~~ 142 (295)
|||+| .++..+|.+ +++++..++++++
T Consensus 1139 G~S~Gg~vA~e~A~~l~~~~~~v~~l~l~~~ 1169 (1296)
T PRK10252 1139 GYSLGGTLAQGIAARLRARGEEVAFLGLLDT 1169 (1296)
T ss_pred EechhhHHHHHHHHHHHHcCCceeEEEEecC
Confidence 77765 467777664 6889999998864
|
|
| >COG3458 Acetyl esterase (deacetylase) [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=98.93 E-value=9.4e-08 Score=79.26 Aligned_cols=235 Identities=16% Similarity=0.197 Sum_probs=129.5
Q ss_pred ceeeEEeCcEEEEEEEcCCCC--CCCceEEEEcCCCCCCccchhhHHHhhhCCCeEEEeCCCCCCCCCC--CCCCC----
Q 022534 12 YGSYIKSGEYRWFVRETGSAD--SRLGTIVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGFGFSDK--PEKGY---- 83 (295)
Q Consensus 12 ~~~~~~~~~~~~~~~~~g~~~--~~~~~vv~lHG~~~~~~~w~~~~~~l~~~~~~via~Dl~G~G~S~~--~~~~~---- 83 (295)
.=.|..++|.+|+..-.-+.. ...|.||--||.++..+.|..++. |+..||.|+.+|-||-|.|+. ..+..
T Consensus 58 dvTf~g~~g~rI~gwlvlP~~~~~~~P~vV~fhGY~g~~g~~~~~l~-wa~~Gyavf~MdvRGQg~~~~dt~~~p~~~s~ 136 (321)
T COG3458 58 DVTFTGYGGARIKGWLVLPRHEKGKLPAVVQFHGYGGRGGEWHDMLH-WAVAGYAVFVMDVRGQGSSSQDTADPPGGPSD 136 (321)
T ss_pred EEEEeccCCceEEEEEEeecccCCccceEEEEeeccCCCCCcccccc-ccccceeEEEEecccCCCccccCCCCCCCCcC
Confidence 335666788888877664432 346789999999999888877664 555699999999999998843 11000
Q ss_pred ---------C-CCCCCHHHHHHHHHHHHHHh-CCC---CceEEEEeccc-chHHHHHHHHhCcCccceeEEEcCCCCCCC
Q 022534 84 ---------D-DFDFTENEFHEELDKLLDVL-EVK---YPFFLVVQGFL-VGSYGLTWALKNPSRISKLAILNSPLTASS 148 (295)
Q Consensus 84 ---------~-~~~~~~~~~~~~l~~~~~~l-~~~---~~~~lv~~G~~-~G~~~~~~a~~~p~~v~~lil~~~p~~~~~ 148 (295)
+ ..+|-..+...|+...++.+ ++. ..-+-+. |.| ||++++..|+..| ++++++.. -|....
T Consensus 137 pG~mtrGilD~kd~yyyr~v~~D~~~ave~~~sl~~vde~Ri~v~-G~SqGGglalaaaal~~-rik~~~~~-~Pfl~d- 212 (321)
T COG3458 137 PGFMTRGILDRKDTYYYRGVFLDAVRAVEILASLDEVDEERIGVT-GGSQGGGLALAAAALDP-RIKAVVAD-YPFLSD- 212 (321)
T ss_pred CceeEeecccCCCceEEeeehHHHHHHHHHHhccCccchhheEEe-ccccCchhhhhhhhcCh-hhhccccc-cccccc-
Confidence 0 00111223345555555543 221 1112222 444 5667666666665 78877654 454332
Q ss_pred CCchhhhhhhcccchhhhhhhHHHHHHHHHhCCCccccccccccccccccccCCchhHHHHHHHhcchhhhhHhhhcCcC
Q 022534 149 PLPGLFQQLRIPLLGEFTAQNAIMAERFIEAGSPYVLKLDKADVYRLPYLASSGPGFALLEAARKVNFKDISSRIGAGFS 228 (295)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (295)
.+. .+..+....+. + ..+++....+. ..+....+.-.+....
T Consensus 213 -f~r---~i~~~~~~~yd---e--i~~y~k~h~~~--------------------e~~v~~TL~yfD~~n~--------- 254 (321)
T COG3458 213 -FPR---AIELATEGPYD---E--IQTYFKRHDPK--------------------EAEVFETLSYFDIVNL--------- 254 (321)
T ss_pred -chh---heeecccCcHH---H--HHHHHHhcCch--------------------HHHHHHHHhhhhhhhH---------
Confidence 110 01111111111 0 11222111110 0111111111111111
Q ss_pred CCCCCCcEEEEEeCCCCCCCcchHHHHHhcCCCCeEEEEecCCCCCCCCCChHHHHHHHHHHHH
Q 022534 229 SGSWDKPVLVAWGISDKYLPQSVAEEFQKGNPNVVKLQMIEGAGHMPQEDWPEKVVDGLRYFFL 292 (295)
Q Consensus 229 ~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~ 292 (295)
+.++++|+|+..|=-|++|++...--.++..+..++..+++.-.|. +-|.-..+.+-.|+.
T Consensus 255 A~RiK~pvL~svgL~D~vcpPstqFA~yN~l~~~K~i~iy~~~aHe---~~p~~~~~~~~~~l~ 315 (321)
T COG3458 255 AARIKVPVLMSVGLMDPVCPPSTQFAAYNALTTSKTIEIYPYFAHE---GGPGFQSRQQVHFLK 315 (321)
T ss_pred HHhhccceEEeecccCCCCCChhhHHHhhcccCCceEEEeeccccc---cCcchhHHHHHHHHH
Confidence 1256899999999999999998776677777777788999887775 444444444555554
|
|
| >TIGR01849 PHB_depoly_PhaZ polyhydroxyalkanoate depolymerase, intracellular | Back alignment and domain information |
|---|
Probab=98.88 E-value=1.2e-07 Score=85.07 Aligned_cols=246 Identities=13% Similarity=0.201 Sum_probs=131.7
Q ss_pred ceEEEEcCCCCCCcc-chhhHHHhhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCceEEEE
Q 022534 36 GTIVFLHGAPSHSYS-YRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEELDKLLDVLEVKYPFFLVV 114 (295)
Q Consensus 36 ~~vv~lHG~~~~~~~-w~~~~~~l~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~~lv~ 114 (295)
||||++==+.++... -+-+++.|.+ |+.|+..|+.--+..... .-.+++++|++-|.++++++|.+ ++++
T Consensus 103 ~pvLiV~Pl~g~~~~L~RS~V~~Ll~-g~dVYl~DW~~p~~vp~~-----~~~f~ldDYi~~l~~~i~~~G~~--v~l~- 173 (406)
T TIGR01849 103 PAVLIVAPMSGHYATLLRSTVEALLP-DHDVYITDWVNARMVPLS-----AGKFDLEDYIDYLIEFIRFLGPD--IHVI- 173 (406)
T ss_pred CcEEEEcCCchHHHHHHHHHHHHHhC-CCcEEEEeCCCCCCCchh-----cCCCCHHHHHHHHHHHHHHhCCC--CcEE-
Confidence 688888777654433 3577788877 999999999866633211 12457899999999999999765 4555
Q ss_pred ecccchH-HHHHH-----HHhCcCccceeEEEcCCCCCCCCCchhhhhh---------h------ccc----chhhhhhh
Q 022534 115 QGFLVGS-YGLTW-----ALKNPSRISKLAILNSPLTASSPLPGLFQQL---------R------IPL----LGEFTAQN 169 (295)
Q Consensus 115 ~G~~~G~-~~~~~-----a~~~p~~v~~lil~~~p~~~~~~~~~~~~~~---------~------~~~----~~~~~~~~ 169 (295)
|++.|+ +++.+ +...|+++++++++.+|.+... .++....+ . .|. .++....-
T Consensus 174 -GvCqgG~~~laa~Al~a~~~~p~~~~sltlm~~PID~~~-~p~~v~~~a~~~~i~~~~~~~i~~vp~~~~g~gr~v~PG 251 (406)
T TIGR01849 174 -AVCQPAVPVLAAVALMAENEPPAQPRSMTLMGGPIDARA-SPTVVNELAREKPIEWFQHNVIMRVPFPYPGAGRLVYPG 251 (406)
T ss_pred -EEchhhHHHHHHHHHHHhcCCCCCcceEEEEecCccCCC-CCchHHHHhhcccHHHHHHHhhhccCccccCCCCcccCH
Confidence 676543 33322 2235778999999999887432 11111110 0 000 00000000
Q ss_pred HHHHHHHHHhCCC------------ccc--ccccc-c---cccccccccCCchhHHHHHHHhcchhhhhH--hhh---cC
Q 022534 170 AIMAERFIEAGSP------------YVL--KLDKA-D---VYRLPYLASSGPGFALLEAARKVNFKDISS--RIG---AG 226 (295)
Q Consensus 170 ~~~~~~~~~~~~~------------~~~--~~~~~-~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~---~~ 226 (295)
..+...|... .+ .+. +.... + .+..-.....-++..+.+.++..-....+. .+. ..
T Consensus 252 ~~~~~~F~~m-np~r~~~~~~~~~~~l~~gd~~~~~~~~~f~~~y~d~~dlpge~y~~~v~~vf~~n~L~~G~l~v~G~~ 330 (406)
T TIGR01849 252 FLQLAGFISM-NLDRHTKAHSDFFLHLVKGDGQEADKHRIFYDEYLAVMDMTAEFYLQTIDVVFQQFLLPQGKFIVEGKR 330 (406)
T ss_pred HHHHHHHHHc-CcchHHHHHHHHHHHHhcCCcchHHHHHHHHHHhhhccCCcHHHHHHHHHHHHHhCCccCCcEEECCEE
Confidence 0011111110 00 000 00000 0 000000001112222222221110000000 000 00
Q ss_pred cCCCCCC-CcEEEEEeCCCCCCCcchHHHHHhcC---C-CCeEEEEecCCCCCCCC---CChHHHHHHHHHHHHh
Q 022534 227 FSSGSWD-KPVLVAWGISDKYLPQSVAEEFQKGN---P-NVVKLQMIEGAGHMPQE---DWPEKVVDGLRYFFLN 293 (295)
Q Consensus 227 ~~~~~~~-~P~l~i~G~~D~~~~~~~~~~~~~~~---~-~~~~~~~i~~~gH~~~~---e~p~~~~~~i~~fl~~ 293 (295)
...++++ +|+|.|.|++|.++++..+..+...+ + .+++.++.+++||.-.. ..++++.-.|.+||..
T Consensus 331 Vdl~~I~~~pll~V~ge~D~I~p~~qt~aa~~l~~~~~s~~k~~~~~~~~GH~Gvf~G~r~~~~i~P~i~~wl~~ 405 (406)
T TIGR01849 331 VDPGAITRVALLTVEGENDDISGLGQTKAALRLCTGIPEDMKRHHLQPGVGHYGVFSGSRFREEIYPLVREFIRR 405 (406)
T ss_pred ecHHHCcccceEEEeccCCCcCCHHHhHHHHHHhhcCChhhceEeecCCCCeEEEeeChhhhhhhchHHHHHHHh
Confidence 1123678 99999999999999998888887764 4 34567888899997544 3578888999999864
|
This model represents an intracellular depolymerase for polyhydroxyalkanoate (PHA), a carbon and energy storing polyester that accumulates in granules in many bacterial species when carbon sources are abundant but other nutrients are limiting. This family is named for PHAs generally, rather than polyhydroxybutyrate (PHB) specificially as in Ralstonia eutropha H16, to avoid overcalling chemical specificity in other species. Note that this family lacks the classic GXSXG lipase motif and instead shows weak similarity to some |
| >COG3571 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.87 E-value=3.4e-07 Score=70.04 Aligned_cols=181 Identities=19% Similarity=0.251 Sum_probs=115.0
Q ss_pred CceEEEEcCCCC--CCccchhhHHHhhhCCCeEEEeCCCCCC--CCC--CCCCCCCCCCCCHHHHHHHHHHHHHHhCCCC
Q 022534 35 LGTIVFLHGAPS--HSYSYRNVMSQMSDAGFHCFAPDWLGFG--FSD--KPEKGYDDFDFTENEFHEELDKLLDVLEVKY 108 (295)
Q Consensus 35 ~~~vv~lHG~~~--~~~~w~~~~~~l~~~~~~via~Dl~G~G--~S~--~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~ 108 (295)
..+||+-||.+. ++.+...++..|+.+|+.|.-+.++=.- +++ +|.+.. . . -...|...++++.+.+.. .
T Consensus 14 ~~tilLaHGAGasmdSt~m~~~a~~la~~G~~vaRfefpYma~Rrtg~rkPp~~~-~-t-~~~~~~~~~aql~~~l~~-g 89 (213)
T COG3571 14 PVTILLAHGAGASMDSTSMTAVAAALARRGWLVARFEFPYMAARRTGRRKPPPGS-G-T-LNPEYIVAIAQLRAGLAE-G 89 (213)
T ss_pred CEEEEEecCCCCCCCCHHHHHHHHHHHhCceeEEEeecchhhhccccCCCCcCcc-c-c-CCHHHHHHHHHHHhcccC-C
Confidence 358999999764 6667788888999899999999876322 111 122111 1 1 125788888898887643 3
Q ss_pred ceEEEEecccch-HHHHHHHHhCcCccceeEEEcCCCCCCCCCchhhhhhhcccchhhhhhhHHHHHHHHHhCCCccccc
Q 022534 109 PFFLVVQGFLVG-SYGLTWALKNPSRISKLAILNSPLTASSPLPGLFQQLRIPLLGEFTAQNAIMAERFIEAGSPYVLKL 187 (295)
Q Consensus 109 ~~~lv~~G~~~G-~~~~~~a~~~p~~v~~lil~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (295)
|. +.+|+|+| -.+.++|..-...|++|++++-|+-++. +|...
T Consensus 90 pL--i~GGkSmGGR~aSmvade~~A~i~~L~clgYPfhppG--------------------------------KPe~~-- 133 (213)
T COG3571 90 PL--IIGGKSMGGRVASMVADELQAPIDGLVCLGYPFHPPG--------------------------------KPEQL-- 133 (213)
T ss_pred ce--eeccccccchHHHHHHHhhcCCcceEEEecCccCCCC--------------------------------Ccccc--
Confidence 53 44577775 5677777665556999999876554321 11000
Q ss_pred cccccccccccccCCchhHHHHHHHhcchhhhhHhhhcCcCCCCCCCcEEEEEeCCCCCCCcchHHHHHhcCCCCeEEEE
Q 022534 188 DKADVYRLPYLASSGPGFALLEAARKVNFKDISSRIGAGFSSGSWDKPVLVAWGISDKYLPQSVAEEFQKGNPNVVKLQM 267 (295)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~ 267 (295)
+ ...+ ..+++|+|+.+|+.|.+-..+....+ .++..+++++
T Consensus 134 ------R----------------------t~HL---------~gl~tPtli~qGtrD~fGtr~~Va~y--~ls~~iev~w 174 (213)
T COG3571 134 ------R----------------------TEHL---------TGLKTPTLITQGTRDEFGTRDEVAGY--ALSDPIEVVW 174 (213)
T ss_pred ------h----------------------hhhc---------cCCCCCeEEeecccccccCHHHHHhh--hcCCceEEEE
Confidence 0 0000 14579999999999998766544333 2334489999
Q ss_pred ecCCCCCC----------CCCChHHHHHHHHHHHHhc
Q 022534 268 IEGAGHMP----------QEDWPEKVVDGLRYFFLNY 294 (295)
Q Consensus 268 i~~~gH~~----------~~e~p~~~~~~i~~fl~~~ 294 (295)
++++.|-. +.++-...++.|..|...+
T Consensus 175 l~~adHDLkp~k~vsgls~~~hL~~~A~~va~~~~~l 211 (213)
T COG3571 175 LEDADHDLKPRKLVSGLSTADHLKTLAEQVAGWARRL 211 (213)
T ss_pred eccCccccccccccccccHHHHHHHHHHHHHHHHhhc
Confidence 99999943 1223356677777777653
|
|
| >COG2945 Predicted hydrolase of the alpha/beta superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.86 E-value=2.5e-07 Score=72.97 Aligned_cols=172 Identities=17% Similarity=0.213 Sum_probs=106.2
Q ss_pred CCceEEEEcCCCC-----CCccchhhHHHhhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCC
Q 022534 34 RLGTIVFLHGAPS-----HSYSYRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEELDKLLDVLEVKY 108 (295)
Q Consensus 34 ~~~~vv~lHG~~~-----~~~~w~~~~~~l~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~ 108 (295)
..|..|.+|=.+. +...=..++..|.++||.++-+|+||-|+|+..-.. ...+-+=+..+.++++..+-+.
T Consensus 27 ~~~iAli~HPHPl~gGtm~nkvv~~la~~l~~~G~atlRfNfRgVG~S~G~fD~----GiGE~~Da~aaldW~~~~hp~s 102 (210)
T COG2945 27 AAPIALICHPHPLFGGTMNNKVVQTLARALVKRGFATLRFNFRGVGRSQGEFDN----GIGELEDAAAALDWLQARHPDS 102 (210)
T ss_pred CCceEEecCCCccccCccCCHHHHHHHHHHHhCCceEEeecccccccccCcccC----CcchHHHHHHHHHHHHhhCCCc
Confidence 4578888885442 333333555567788999999999999999974321 1111122334445555555444
Q ss_pred ce-EEEEecccchH-HHHHHHHhCcCccceeEEEcCCCCCCCCCchhhhhhhcccchhhhhhhHHHHHHHHHhCCCcccc
Q 022534 109 PF-FLVVQGFLVGS-YGLTWALKNPSRISKLAILNSPLTASSPLPGLFQQLRIPLLGEFTAQNAIMAERFIEAGSPYVLK 186 (295)
Q Consensus 109 ~~-~lv~~G~~~G~-~~~~~a~~~p~~v~~lil~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (295)
+. .+ .|+|-|+ +++.+|.+.|+. ...+.. +|... . ..|
T Consensus 103 ~~~~l--~GfSFGa~Ia~~la~r~~e~-~~~is~-~p~~~------~--------------------~df---------- 142 (210)
T COG2945 103 ASCWL--AGFSFGAYIAMQLAMRRPEI-LVFISI-LPPIN------A--------------------YDF---------- 142 (210)
T ss_pred hhhhh--cccchHHHHHHHHHHhcccc-cceeec-cCCCC------c--------------------hhh----------
Confidence 43 23 2788775 577888888873 222222 11100 0 000
Q ss_pred ccccccccccccccCCchhHHHHHHHhcchhhhhHhhhcCcCCCCCCCcEEEEEeCCCCCCCcchHHHHHhcCCCCeEEE
Q 022534 187 LDKADVYRLPYLASSGPGFALLEAARKVNFKDISSRIGAGFSSGSWDKPVLVAWGISDKYLPQSVAEEFQKGNPNVVKLQ 266 (295)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~ 266 (295)
.. ++ .-.+|.++|+|+.|.+++.+...+.++..+ .+++
T Consensus 143 -------------------s~--------l~-------------P~P~~~lvi~g~~Ddvv~l~~~l~~~~~~~--~~~i 180 (210)
T COG2945 143 -------------------SF--------LA-------------PCPSPGLVIQGDADDVVDLVAVLKWQESIK--ITVI 180 (210)
T ss_pred -------------------hh--------cc-------------CCCCCceeEecChhhhhcHHHHHHhhcCCC--CceE
Confidence 00 00 125899999999999988776666666643 5899
Q ss_pred EecCCCCCCCCCChHHHHHHHHHHHH
Q 022534 267 MIEGAGHMPQEDWPEKVVDGLRYFFL 292 (295)
Q Consensus 267 ~i~~~gH~~~~e~p~~~~~~i~~fl~ 292 (295)
.++++.|+.+- +-+.+.+.|.+|+.
T Consensus 181 ~i~~a~HFF~g-Kl~~l~~~i~~~l~ 205 (210)
T COG2945 181 TIPGADHFFHG-KLIELRDTIADFLE 205 (210)
T ss_pred EecCCCceecc-cHHHHHHHHHHHhh
Confidence 99999999764 45667788888874
|
|
| >COG0412 Dienelactone hydrolase and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=98.85 E-value=4.9e-07 Score=75.96 Aligned_cols=179 Identities=23% Similarity=0.326 Sum_probs=115.0
Q ss_pred ceEEEEcCCCCCCccchhhHHHhhhCCCeEEEeCCCCC-CCCCCCC--CC-CCC---CCCCHHHHHHHHHHHHHHhC---
Q 022534 36 GTIVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGF-GFSDKPE--KG-YDD---FDFTENEFHEELDKLLDVLE--- 105 (295)
Q Consensus 36 ~~vv~lHG~~~~~~~w~~~~~~l~~~~~~via~Dl~G~-G~S~~~~--~~-~~~---~~~~~~~~~~~l~~~~~~l~--- 105 (295)
|.||++|++.+-....+.+...|+..||-|++||+-+. |.+.... .. ... ...+......|+...++.+.
T Consensus 28 P~VIv~hei~Gl~~~i~~~a~rlA~~Gy~v~~Pdl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~a~~~~L~~~~ 107 (236)
T COG0412 28 PGVIVLHEIFGLNPHIRDVARRLAKAGYVVLAPDLYGRQGDPTDIEDEPAELETGLVERVDPAEVLADIDAALDYLARQP 107 (236)
T ss_pred CEEEEEecccCCchHHHHHHHHHHhCCcEEEechhhccCCCCCcccccHHHHhhhhhccCCHHHHHHHHHHHHHHHHhCC
Confidence 79999999988888889999999999999999999873 3333211 00 000 00112456777777777663
Q ss_pred -C-CCceEEEEecccch-HHHHHHHHhCcCccceeEEEcCCCCCCCCCchhhhhhhcccchhhhhhhHHHHHHHHHhCCC
Q 022534 106 -V-KYPFFLVVQGFLVG-SYGLTWALKNPSRISKLAILNSPLTASSPLPGLFQQLRIPLLGEFTAQNAIMAERFIEAGSP 182 (295)
Q Consensus 106 -~-~~~~~lv~~G~~~G-~~~~~~a~~~p~~v~~lil~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (295)
. .+.+.++ |+++| .+++.++.+.| .|++.+..-. .... .
T Consensus 108 ~~~~~~ig~~--GfC~GG~~a~~~a~~~~-~v~a~v~fyg-~~~~----------------------------------~ 149 (236)
T COG0412 108 QVDPKRIGVV--GFCMGGGLALLAATRAP-EVKAAVAFYG-GLIA----------------------------------D 149 (236)
T ss_pred CCCCceEEEE--EEcccHHHHHHhhcccC-CccEEEEecC-CCCC----------------------------------C
Confidence 1 1224343 88765 56777777776 6777765421 0000 0
Q ss_pred ccccccccccccccccccCCchhHHHHHHHhcchhhhhHhhhcCcCCCCCCCcEEEEEeCCCCCCCcchHHHHHhcCCC-
Q 022534 183 YVLKLDKADVYRLPYLASSGPGFALLEAARKVNFKDISSRIGAGFSSGSWDKPVLVAWGISDKYLPQSVAEEFQKGNPN- 261 (295)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~- 261 (295)
.. .+ ..++++|+|+++|+.|+.++......+.+.+..
T Consensus 150 ~~--------------------------------~~----------~~~~~~pvl~~~~~~D~~~p~~~~~~~~~~~~~~ 187 (236)
T COG0412 150 DT--------------------------------AD----------APKIKVPVLLHLAGEDPYIPAADVDALAAALEDA 187 (236)
T ss_pred cc--------------------------------cc----------cccccCcEEEEecccCCCCChhHHHHHHHHHHhc
Confidence 00 00 015589999999999999988766666544332
Q ss_pred --CeEEEEecCCCCCCCCCC-----------hHHHHHHHHHHHHhc
Q 022534 262 --VVKLQMIEGAGHMPQEDW-----------PEKVVDGLRYFFLNY 294 (295)
Q Consensus 262 --~~~~~~i~~~gH~~~~e~-----------p~~~~~~i~~fl~~~ 294 (295)
..++.+++++.|-.+.+. .+...+.+.+|+.+.
T Consensus 188 ~~~~~~~~y~ga~H~F~~~~~~~~~~y~~~aa~~a~~~~~~ff~~~ 233 (236)
T COG0412 188 GVKVDLEIYPGAGHGFANDRADYHPGYDAAAAEDAWQRVLAFFKRL 233 (236)
T ss_pred CCCeeEEEeCCCccccccCCCcccccCCHHHHHHHHHHHHHHHHHh
Confidence 378999999999776432 246667777777653
|
|
| >PRK10115 protease 2; Provisional | Back alignment and domain information |
|---|
Probab=98.78 E-value=5.8e-07 Score=86.86 Aligned_cols=123 Identities=15% Similarity=0.045 Sum_probs=72.7
Q ss_pred EeCcEEEEEEE-cCC---CCCCCceEEEEcCCCCCCc--cchhhHHHhhhCCCeEEEeCCCCCCCCCCCC---CCCCCCC
Q 022534 17 KSGEYRWFVRE-TGS---ADSRLGTIVFLHGAPSHSY--SYRNVMSQMSDAGFHCFAPDWLGFGFSDKPE---KGYDDFD 87 (295)
Q Consensus 17 ~~~~~~~~~~~-~g~---~~~~~~~vv~lHG~~~~~~--~w~~~~~~l~~~~~~via~Dl~G~G~S~~~~---~~~~~~~ 87 (295)
+.+|.++.+.. +.+ .+.++|.||++||.++.+. .|......|.++||-|+.++.||-|.=.+.- .......
T Consensus 423 s~DG~~Ip~~l~~~~~~~~~~~~P~ll~~hGg~~~~~~p~f~~~~~~l~~rG~~v~~~n~RGs~g~G~~w~~~g~~~~k~ 502 (686)
T PRK10115 423 ARDGVEVPVSLVYHRKHFRKGHNPLLVYGYGSYGASIDADFSFSRLSLLDRGFVYAIVHVRGGGELGQQWYEDGKFLKKK 502 (686)
T ss_pred CCCCCEEEEEEEEECCCCCCCCCCEEEEEECCCCCCCCCCccHHHHHHHHCCcEEEEEEcCCCCccCHHHHHhhhhhcCC
Confidence 44677766522 211 2234689999999887664 4666667788889999999999977554310 0000001
Q ss_pred CCHHHHHHHHHHHHHHhCCCCceEEEEecccchHHHHHHH-HhCcCccceeEEE
Q 022534 88 FTENEFHEELDKLLDVLEVKYPFFLVVQGFLVGSYGLTWA-LKNPSRISKLAIL 140 (295)
Q Consensus 88 ~~~~~~~~~l~~~~~~l~~~~~~~lv~~G~~~G~~~~~~a-~~~p~~v~~lil~ 140 (295)
-+.+|++..+..++++ +.-.+--|.+.|.|-|++...++ .++|+++++.|..
T Consensus 503 ~~~~D~~a~~~~Lv~~-g~~d~~rl~i~G~S~GG~l~~~~~~~~Pdlf~A~v~~ 555 (686)
T PRK10115 503 NTFNDYLDACDALLKL-GYGSPSLCYGMGGSAGGMLMGVAINQRPELFHGVIAQ 555 (686)
T ss_pred CcHHHHHHHHHHHHHc-CCCChHHeEEEEECHHHHHHHHHHhcChhheeEEEec
Confidence 1445666666656554 43222223334556555433333 4689999988765
|
|
| >PTZ00472 serine carboxypeptidase (CBP1); Provisional | Back alignment and domain information |
|---|
Probab=98.77 E-value=1.6e-06 Score=79.89 Aligned_cols=124 Identities=21% Similarity=0.367 Sum_probs=72.7
Q ss_pred ceeeEEeC----cEEEEEEEcCC--CCCCCceEEEEcCCCCCCccchhhH------------------HHhhhCCCeEEE
Q 022534 12 YGSYIKSG----EYRWFVRETGS--ADSRLGTIVFLHGAPSHSYSYRNVM------------------SQMSDAGFHCFA 67 (295)
Q Consensus 12 ~~~~~~~~----~~~~~~~~~g~--~~~~~~~vv~lHG~~~~~~~w~~~~------------------~~l~~~~~~via 67 (295)
+.-+++++ +..+||..+.. .....|.+|+++|+|+++..+-.+. --|.+ ...++.
T Consensus 48 ~sGy~~v~~~~~~~~lFyw~~~s~~~~~~~Pl~lwlnGGPG~ss~~G~f~E~GP~~i~~~~~~~~~n~~sW~~-~~~~l~ 126 (462)
T PTZ00472 48 WSGYFDIPGNQTDKHYFYWAFGPRNGNPEAPVLLWMTGGPGCSSMFALLAENGPCLMNETTGDIYNNTYSWNN-EAYVIY 126 (462)
T ss_pred eeEEEEeCCCCCCceEEEEEEEcCCCCCCCCEEEEECCCCcHHHHHhhhccCCCeEEeCCCCceeECCccccc-ccCeEE
Confidence 44566664 34555544432 2234689999999998886652221 01333 479999
Q ss_pred eCCC-CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh-----CC-CCceEEEEecccch-HHHHHHHH---hCc-----
Q 022534 68 PDWL-GFGFSDKPEKGYDDFDFTENEFHEELDKLLDVL-----EV-KYPFFLVVQGFLVG-SYGLTWAL---KNP----- 131 (295)
Q Consensus 68 ~Dl~-G~G~S~~~~~~~~~~~~~~~~~~~~l~~~~~~l-----~~-~~~~~lv~~G~~~G-~~~~~~a~---~~p----- 131 (295)
+|+| |+|.|......+ ..+.++.++|+.++++.+ .. +.+++|+ |+|.| .++-.+|. ++.
T Consensus 127 iDqP~G~G~S~~~~~~~---~~~~~~~a~d~~~~l~~f~~~~p~~~~~~~~i~--GeSygG~y~p~~a~~i~~~n~~~~~ 201 (462)
T PTZ00472 127 VDQPAGVGFSYADKADY---DHNESEVSEDMYNFLQAFFGSHEDLRANDLFVV--GESYGGHYAPATAYRINMGNKKGDG 201 (462)
T ss_pred EeCCCCcCcccCCCCCC---CCChHHHHHHHHHHHHHHHHhCccccCCCEEEE--eecchhhhHHHHHHHHHhhccccCC
Confidence 9986 888887543222 224567788888887754 11 3567777 56654 45544432 111
Q ss_pred --CccceeEEEc
Q 022534 132 --SRISKLAILN 141 (295)
Q Consensus 132 --~~v~~lil~~ 141 (295)
=+++++++-+
T Consensus 202 ~~inLkGi~IGN 213 (462)
T PTZ00472 202 LYINLAGLAVGN 213 (462)
T ss_pred ceeeeEEEEEec
Confidence 1477777654
|
|
| >PF02273 Acyl_transf_2: Acyl transferase; InterPro: IPR003157 LuxD proteins are bacterial acyl transferases | Back alignment and domain information |
|---|
Probab=98.77 E-value=4.3e-06 Score=68.63 Aligned_cols=225 Identities=20% Similarity=0.200 Sum_probs=101.9
Q ss_pred eEEe-CcEEEEEEEcCCCC---CCCceEEEEcCCCCCCccchhhHHHhhhCCCeEEEeCCCCC-CCCCCCCCCCCCCCCC
Q 022534 15 YIKS-GEYRWFVRETGSAD---SRLGTIVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGF-GFSDKPEKGYDDFDFT 89 (295)
Q Consensus 15 ~~~~-~~~~~~~~~~g~~~---~~~~~vv~lHG~~~~~~~w~~~~~~l~~~~~~via~Dl~G~-G~S~~~~~~~~~~~~~ 89 (295)
.+.. +|..|++++..|.. ..+++||+.-||+..-..+..++++|+..||+|+-||-.-| |.|++... +|+
T Consensus 6 vi~~~~~~~I~vwet~P~~~~~~~~~tiliA~Gf~rrmdh~agLA~YL~~NGFhViRyDsl~HvGlSsG~I~-----eft 80 (294)
T PF02273_consen 6 VIRLEDGRQIRVWETRPKNNEPKRNNTILIAPGFARRMDHFAGLAEYLSANGFHVIRYDSLNHVGLSSGDIN-----EFT 80 (294)
T ss_dssp EEEETTTEEEEEEEE---TTS---S-EEEEE-TT-GGGGGGHHHHHHHHTTT--EEEE---B------------------
T ss_pred eeEcCCCCEEEEeccCCCCCCcccCCeEEEecchhHHHHHHHHHHHHHhhCCeEEEeccccccccCCCCChh-----hcc
Confidence 3444 57899998876533 23589999999999999999999999989999999998876 78886432 457
Q ss_pred HHHHHHHHHHHHHHh---CCCCceEEEEecccchHHHHHHHHhCcCccceeEEEcCCCCCCCCCchhhhhhhcccchhhh
Q 022534 90 ENEFHEELDKLLDVL---EVKYPFFLVVQGFLVGSYGLTWALKNPSRISKLAILNSPLTASSPLPGLFQQLRIPLLGEFT 166 (295)
Q Consensus 90 ~~~~~~~l~~~~~~l---~~~~~~~lv~~G~~~G~~~~~~a~~~p~~v~~lil~~~p~~~~~~~~~~~~~~~~~~~~~~~ 166 (295)
++.-..++..+++.+ |..+ +-|++.+ +.|-+|...|. .++ +.-||...... .+...+...+...+.
T Consensus 81 ms~g~~sL~~V~dwl~~~g~~~-~GLIAaS-LSaRIAy~Va~-~i~-lsfLitaVGVV-------nlr~TLe~al~~Dyl 149 (294)
T PF02273_consen 81 MSIGKASLLTVIDWLATRGIRR-IGLIAAS-LSARIAYEVAA-DIN-LSFLITAVGVV-------NLRDTLEKALGYDYL 149 (294)
T ss_dssp HHHHHHHHHHHHHHHHHTT----EEEEEET-THHHHHHHHTT-TS---SEEEEES--S--------HHHHHHHHHSS-GG
T ss_pred hHHhHHHHHHHHHHHHhcCCCc-chhhhhh-hhHHHHHHHhh-ccC-cceEEEEeeee-------eHHHHHHHHhccchh
Confidence 777777777666655 4444 4455432 23445555555 333 45455442111 111110000000000
Q ss_pred hhhHHHHHHHHHhCCCccccccccccccccccccCCchhHHHHHHHhcchhhh---hHhhhcCcCCCCCCCcEEEEEeCC
Q 022534 167 AQNAIMAERFIEAGSPYVLKLDKADVYRLPYLASSGPGFALLEAARKVNFKDI---SSRIGAGFSSGSWDKPVLVAWGIS 243 (295)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~P~l~i~G~~ 243 (295)
. .+.+ ..| +..+...... ....+.....+..+.++ .+++ +.+++|++.+++++
T Consensus 150 ~-------~~i~-~lp-----~dldfeGh~l-----~~~vFv~dc~e~~w~~l~ST~~~~------k~l~iP~iaF~A~~ 205 (294)
T PF02273_consen 150 Q-------LPIE-QLP-----EDLDFEGHNL-----GAEVFVTDCFEHGWDDLDSTINDM------KRLSIPFIAFTAND 205 (294)
T ss_dssp G-------S-GG-G-------SEEEETTEEE-----EHHHHHHHHHHTT-SSHHHHHHHH------TT--S-EEEEEETT
T ss_pred h-------cchh-hCC-----Cccccccccc-----chHHHHHHHHHcCCccchhHHHHH------hhCCCCEEEEEeCC
Confidence 0 0000 000 0000000000 00123333333332222 2222 26799999999999
Q ss_pred CCCCCcchHHHHHhcC-CCCeEEEEecCCCCCCCCCCh
Q 022534 244 DKYLPQSVAEEFQKGN-PNVVKLQMIEGAGHMPQEDWP 280 (295)
Q Consensus 244 D~~~~~~~~~~~~~~~-~~~~~~~~i~~~gH~~~~e~p 280 (295)
|-++......++...+ .+.+++..++|++|-.. |+|
T Consensus 206 D~WV~q~eV~~~~~~~~s~~~klysl~Gs~HdL~-enl 242 (294)
T PF02273_consen 206 DDWVKQSEVEELLDNINSNKCKLYSLPGSSHDLG-ENL 242 (294)
T ss_dssp -TTS-HHHHHHHHTT-TT--EEEEEETT-SS-TT-SSH
T ss_pred CccccHHHHHHHHHhcCCCceeEEEecCccchhh-hCh
Confidence 9999888777776543 34589999999999864 444
|
Together with an acyl-protein synthetase (LuxE) and reductase (LuxC), they form a multienzyme complex. This complex channels activated fatty acids into the aldehyde substrate for the luciferase-catalyzed bacterial bioluminescence reaction [, ]. ; GO: 0016746 transferase activity, transferring acyl groups, 0006631 fatty acid metabolic process; PDB: 1THT_B. |
| >COG4757 Predicted alpha/beta hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.75 E-value=4.2e-07 Score=73.77 Aligned_cols=249 Identities=20% Similarity=0.279 Sum_probs=121.2
Q ss_pred CcEEEEEEEcCCCCCCCceEEEEcCCCCCCccchhhHHHhhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCCHHHHH-HHH
Q 022534 19 GEYRWFVRETGSADSRLGTIVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFH-EEL 97 (295)
Q Consensus 19 ~~~~~~~~~~g~~~~~~~~vv~lHG~~~~~~~w~~~~~~l~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~-~~l 97 (295)
+|+.+-.+.+.........+++--+.+--..-|+.+++..+++||.|.++|+||-|.|+.+... ...+...|++ .|+
T Consensus 14 DG~~l~~~~~pA~~~~~g~~~va~a~Gv~~~fYRrfA~~a~~~Gf~Vlt~dyRG~g~S~p~~~~--~~~~~~~DwA~~D~ 91 (281)
T COG4757 14 DGYSLPGQRFPADGKASGRLVVAGATGVGQYFYRRFAAAAAKAGFEVLTFDYRGIGQSRPASLS--GSQWRYLDWARLDF 91 (281)
T ss_pred CCccCccccccCCCCCCCcEEecccCCcchhHhHHHHHHhhccCceEEEEecccccCCCccccc--cCccchhhhhhcch
Confidence 4555555544432222224554444555666788899999889999999999999999965432 2223333433 344
Q ss_pred HHHHHHhC---CCCceEEEEecccchHHHHHHHHhCcCccceeEEEcCCCCCCCCCchhhhhhhcccchh-----hhhhh
Q 022534 98 DKLLDVLE---VKYPFFLVVQGFLVGSYGLTWALKNPSRISKLAILNSPLTASSPLPGLFQQLRIPLLGE-----FTAQN 169 (295)
Q Consensus 98 ~~~~~~l~---~~~~~~lv~~G~~~G~~~~~~a~~~p~~v~~lil~~~p~~~~~~~~~~~~~~~~~~~~~-----~~~~~ 169 (295)
...++.+. -..|...| |||.|.=++.++..+| +...-.+.++... -..+.++...++.-.+.. +....
T Consensus 92 ~aal~~~~~~~~~~P~y~v--gHS~GGqa~gL~~~~~-k~~a~~vfG~gag-wsg~m~~~~~l~~~~l~~lv~p~lt~w~ 167 (281)
T COG4757 92 PAALAALKKALPGHPLYFV--GHSFGGQALGLLGQHP-KYAAFAVFGSGAG-WSGWMGLRERLGAVLLWNLVGPPLTFWK 167 (281)
T ss_pred HHHHHHHHhhCCCCceEEe--eccccceeecccccCc-ccceeeEeccccc-cccchhhhhcccceeeccccccchhhcc
Confidence 44444332 34566666 6776642233334555 4444444432111 111111111111100000 00000
Q ss_pred HHHHHHHHHhCCCccccccccccc---cccccccCCchhHHHHHHHhcchhhhhHhhhcCcCCCCCCCcEEEEEeCCCCC
Q 022534 170 AIMAERFIEAGSPYVLKLDKADVY---RLPYLASSGPGFALLEAARKVNFKDISSRIGAGFSSGSWDKPVLVAWGISDKY 246 (295)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~ 246 (295)
..+...+...+.... ....++.. +.|..-..+| ...+.++.. +++.+|+.++...+|+.
T Consensus 168 g~~p~~l~G~G~d~p-~~v~RdW~RwcR~p~y~fddp--------~~~~~~q~y---------aaVrtPi~~~~~~DD~w 229 (281)
T COG4757 168 GYMPKDLLGLGSDLP-GTVMRDWARWCRHPRYYFDDP--------AMRNYRQVY---------AAVRTPITFSRALDDPW 229 (281)
T ss_pred ccCcHhhcCCCccCc-chHHHHHHHHhcCccccccCh--------hHhHHHHHH---------HHhcCceeeeccCCCCc
Confidence 011111111110000 00000000 0010000000 000111111 15589999999999999
Q ss_pred CCcchHHHHHhcCCC-CeEEEEecCC----CCCCCCCCh-HHHHHHHHHHH
Q 022534 247 LPQSVAEEFQKGNPN-VVKLQMIEGA----GHMPQEDWP-EKVVDGLRYFF 291 (295)
Q Consensus 247 ~~~~~~~~~~~~~~~-~~~~~~i~~~----gH~~~~e~p-~~~~~~i~~fl 291 (295)
+|++..+.+.+..++ ..+...++.+ ||+-..-+| |.+.+.+..|+
T Consensus 230 ~P~As~d~f~~~y~nApl~~~~~~~~~~~lGH~gyfR~~~Ealwk~~L~w~ 280 (281)
T COG4757 230 APPASRDAFASFYRNAPLEMRDLPRAEGPLGHMGYFREPFEALWKEMLGWF 280 (281)
T ss_pred CCHHHHHHHHHhhhcCcccceecCcccCcccchhhhccchHHHHHHHHHhh
Confidence 999999888776554 2355555554 998776666 77777777665
|
|
| >PF05728 UPF0227: Uncharacterised protein family (UPF0227); InterPro: IPR008886 Despite being classed as uncharacterised proteins, the members of this family are almost certainly enzymes in that they contain a domain distantly related to IPR000073 from INTERPRO | Back alignment and domain information |
|---|
Probab=98.68 E-value=4.1e-06 Score=67.60 Aligned_cols=180 Identities=19% Similarity=0.250 Sum_probs=96.2
Q ss_pred EEEEcCCCCCCccch--hhHHHhhhCC--CeEEEeCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCceEEE
Q 022534 38 IVFLHGAPSHSYSYR--NVMSQMSDAG--FHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEELDKLLDVLEVKYPFFLV 113 (295)
Q Consensus 38 vv~lHG~~~~~~~w~--~~~~~l~~~~--~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~~lv 113 (295)
|++||||.++..+.+ .+.+.+++.+ .++..+|++- ..+...+.+.++++....+. +.||
T Consensus 2 ilYlHGF~Ssp~S~Ka~~l~~~~~~~~~~~~~~~p~l~~----------------~p~~a~~~l~~~i~~~~~~~-~~li 64 (187)
T PF05728_consen 2 ILYLHGFNSSPQSFKAQALKQYFAEHGPDIQYPCPDLPP----------------FPEEAIAQLEQLIEELKPEN-VVLI 64 (187)
T ss_pred eEEecCCCCCCCCHHHHHHHHHHHHhCCCceEECCCCCc----------------CHHHHHHHHHHHHHhCCCCC-eEEE
Confidence 899999998887765 4445565432 4566666651 23455677788888775444 5566
Q ss_pred EecccchH-HHHHHHHhCcCccceeEEEcCCCCCCCCCchhhhhhhcccchhhhhhhHHHHHHHHHhCCCcccccccccc
Q 022534 114 VQGFLVGS-YGLTWALKNPSRISKLAILNSPLTASSPLPGLFQQLRIPLLGEFTAQNAIMAERFIEAGSPYVLKLDKADV 192 (295)
Q Consensus 114 ~~G~~~G~-~~~~~a~~~p~~v~~lil~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (295)
|+|+|+ +|..+|.+++ +++ |++++...+. ..+ ..++.....+.+. +.
T Consensus 65 --GSSlGG~~A~~La~~~~--~~a-vLiNPav~p~----~~l-------------------~~~iG~~~~~~~~----e~ 112 (187)
T PF05728_consen 65 --GSSLGGFYATYLAERYG--LPA-VLINPAVRPY----ELL-------------------QDYIGEQTNPYTG----ES 112 (187)
T ss_pred --EEChHHHHHHHHHHHhC--CCE-EEEcCCCCHH----HHH-------------------HHhhCccccCCCC----cc
Confidence 667665 5777777775 444 5665322210 000 0111110000000 00
Q ss_pred ccccccccCCchhHHHHHHHhcchhhhhHhhhcCcCCCCCCCcEEEEEeCCCCCCCcchHHHHHhcCCCCeEEEEecCCC
Q 022534 193 YRLPYLASSGPGFALLEAARKVNFKDISSRIGAGFSSGSWDKPVLVAWGISDKYLPQSVAEEFQKGNPNVVKLQMIEGAG 272 (295)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~g 272 (295)
+.+. .......+ .+... ..+-..+++++.++.|.+.+...+.... .. +...+.+|.+
T Consensus 113 ~~~~--------~~~~~~l~---------~l~~~--~~~~~~~~lvll~~~DEvLd~~~a~~~~---~~-~~~~i~~ggd 169 (187)
T PF05728_consen 113 YELT--------EEHIEELK---------ALEVP--YPTNPERYLVLLQTGDEVLDYREAVAKY---RG-CAQIIEEGGD 169 (187)
T ss_pred ceec--------hHhhhhcc---------eEecc--ccCCCccEEEEEecCCcccCHHHHHHHh---cC-ceEEEEeCCC
Confidence 0000 00011111 00000 0123579999999999999985443333 23 4555678889
Q ss_pred CCCCCCChHHHHHHHHHHH
Q 022534 273 HMPQEDWPEKVVDGLRYFF 291 (295)
Q Consensus 273 H~~~~e~p~~~~~~i~~fl 291 (295)
|.. +.-++....|.+|+
T Consensus 170 H~f--~~f~~~l~~i~~f~ 186 (187)
T PF05728_consen 170 HSF--QDFEEYLPQIIAFL 186 (187)
T ss_pred CCC--ccHHHHHHHHHHhh
Confidence 976 45566777788876
|
One of the members of this family YqiA has been shown to be a esterase []. Other members, which include the Escherichia coli (strain K12) YcfP protein are uncharacterised. |
| >COG3243 PhaC Poly(3-hydroxyalkanoate) synthetase [Lipid metabolism] | Back alignment and domain information |
|---|
Probab=98.67 E-value=5.9e-07 Score=79.21 Aligned_cols=107 Identities=18% Similarity=0.262 Sum_probs=74.7
Q ss_pred CCceEEEEcCCCCCCccch-----hhHHHhhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCC
Q 022534 34 RLGTIVFLHGAPSHSYSYR-----NVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEELDKLLDVLEVKY 108 (295)
Q Consensus 34 ~~~~vv~lHG~~~~~~~w~-----~~~~~l~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~ 108 (295)
.+.|++++|=+.-.-..|+ -++..|.++|+.|+.+|+++=.++.+... . .+|-.+.+...++.+++..+.++
T Consensus 106 ~~~PlLiVpP~iNk~yi~Dl~~~~s~V~~l~~~g~~vfvIsw~nPd~~~~~~~-~--edYi~e~l~~aid~v~~itg~~~ 182 (445)
T COG3243 106 LKRPLLIVPPWINKFYILDLSPEKSLVRWLLEQGLDVFVISWRNPDASLAAKN-L--EDYILEGLSEAIDTVKDITGQKD 182 (445)
T ss_pred CCCceEeeccccCceeEEeCCCCccHHHHHHHcCCceEEEeccCchHhhhhcc-H--HHHHHHHHHHHHHHHHHHhCccc
Confidence 3578999998876666664 45667777899999999998887776331 1 13444566677777777777665
Q ss_pred ceEEEEecccc-hHHHHHHHHhCcCc-cceeEEEcCCCCC
Q 022534 109 PFFLVVQGFLV-GSYGLTWALKNPSR-ISKLAILNSPLTA 146 (295)
Q Consensus 109 ~~~lv~~G~~~-G~~~~~~a~~~p~~-v~~lil~~~p~~~ 146 (295)
+.++ |++. |.+....++.++.+ |++++++.+|.+.
T Consensus 183 -Inli--GyCvGGtl~~~ala~~~~k~I~S~T~lts~~DF 219 (445)
T COG3243 183 -INLI--GYCVGGTLLAAALALMAAKRIKSLTLLTSPVDF 219 (445)
T ss_pred -ccee--eEecchHHHHHHHHhhhhcccccceeeecchhh
Confidence 5666 7754 55554445555555 9999999888754
|
|
| >PF10230 DUF2305: Uncharacterised conserved protein (DUF2305); InterPro: IPR019363 This entry contains proteins that have no known function | Back alignment and domain information |
|---|
Probab=98.60 E-value=1.8e-06 Score=73.87 Aligned_cols=107 Identities=22% Similarity=0.323 Sum_probs=81.9
Q ss_pred CceEEEEcCCCCCCccchhhHHHhhh---CCCeEEEeCCCCCCCCCCCCC-CCCCCCCCHHHHHHHHHHHHHHhCC----
Q 022534 35 LGTIVFLHGAPSHSYSYRNVMSQMSD---AGFHCFAPDWLGFGFSDKPEK-GYDDFDFTENEFHEELDKLLDVLEV---- 106 (295)
Q Consensus 35 ~~~vv~lHG~~~~~~~w~~~~~~l~~---~~~~via~Dl~G~G~S~~~~~-~~~~~~~~~~~~~~~l~~~~~~l~~---- 106 (295)
+..++|+-|.||-..-|.+++..|.+ ..|.|++..+.||-.++.... ..+...|+++++++.-.++++++-.
T Consensus 2 ~~li~~IPGNPGlv~fY~~Fl~~L~~~l~~~~~i~~ish~Gh~~~~~~~~~~~~~~~~sL~~QI~hk~~~i~~~~~~~~~ 81 (266)
T PF10230_consen 2 RPLIVFIPGNPGLVEFYEEFLSALYEKLNPQFEILGISHAGHSTSPSNSKFSPNGRLFSLQDQIEHKIDFIKELIPQKNK 81 (266)
T ss_pred cEEEEEECCCCChHHHHHHHHHHHHHhCCCCCeeEEecCCCCcCCcccccccCCCCccCHHHHHHHHHHHHHHHhhhhcC
Confidence 45799999999999999999988873 379999999999998876410 0113367899999888888887633
Q ss_pred -CCceEEEEecccchHH-HHHHHHhCc---CccceeEEEcCCC
Q 022534 107 -KYPFFLVVQGFLVGSY-GLTWALKNP---SRISKLAILNSPL 144 (295)
Q Consensus 107 -~~~~~lv~~G~~~G~~-~~~~a~~~p---~~v~~lil~~~p~ 144 (295)
+.+++|+ |||.|++ ++.+..+++ .+|++.+++ .|.
T Consensus 82 ~~~~liLi--GHSIGayi~levl~r~~~~~~~V~~~~lL-fPT 121 (266)
T PF10230_consen 82 PNVKLILI--GHSIGAYIALEVLKRLPDLKFRVKKVILL-FPT 121 (266)
T ss_pred CCCcEEEE--eCcHHHHHHHHHHHhccccCCceeEEEEe-CCc
Confidence 3346666 8899985 677777888 688888887 454
|
|
| >KOG2624 consensus Triglyceride lipase-cholesterol esterase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.58 E-value=3.7e-06 Score=75.32 Aligned_cols=131 Identities=17% Similarity=0.258 Sum_probs=81.2
Q ss_pred cccceeeEEe-CcEEEEEEEcCCCCCCCceEEEEcCCCCCCccchhh-----HHH-hhhCCCeEEEeCCCCCCCCCCCC-
Q 022534 9 GREYGSYIKS-GEYRWFVRETGSADSRLGTIVFLHGAPSHSYSYRNV-----MSQ-MSDAGFHCFAPDWLGFGFSDKPE- 80 (295)
Q Consensus 9 ~~~~~~~~~~-~~~~~~~~~~g~~~~~~~~vv~lHG~~~~~~~w~~~-----~~~-l~~~~~~via~Dl~G~G~S~~~~- 80 (295)
++.+-..|.. +|+.+..+-.--+..++|+|++.||..+++..|-.. +++ |+++||.|..-..||--.|.+..
T Consensus 46 y~~E~h~V~T~DgYiL~lhRIp~~~~~rp~Vll~HGLl~sS~~Wv~n~p~~sLaf~LadaGYDVWLgN~RGn~ySr~h~~ 125 (403)
T KOG2624|consen 46 YPVEEHEVTTEDGYILTLHRIPRGKKKRPVVLLQHGLLASSSSWVLNGPEQSLAFLLADAGYDVWLGNNRGNTYSRKHKK 125 (403)
T ss_pred CceEEEEEEccCCeEEEEeeecCCCCCCCcEEEeeccccccccceecCccccHHHHHHHcCCceeeecCcCcccchhhcc
Confidence 3333444444 677776654422225679999999999999999644 233 67789999999999988886421
Q ss_pred --C--CCCCCCCCHHHHH-HHHHHHHHHh----CCCCceEEEEecccchHHH-HHHHHhCcC---ccceeEEEcC
Q 022534 81 --K--GYDDFDFTENEFH-EELDKLLDVL----EVKYPFFLVVQGFLVGSYG-LTWALKNPS---RISKLAILNS 142 (295)
Q Consensus 81 --~--~~~~~~~~~~~~~-~~l~~~~~~l----~~~~~~~lv~~G~~~G~~~-~~~a~~~p~---~v~~lil~~~ 142 (295)
+ ..+-.++|..+++ -||-++++.+ +.+ +++.+ |||-|+.. ...+..+|+ +|+..+++++
T Consensus 126 l~~~~~~~FW~FS~~Em~~yDLPA~IdyIL~~T~~~-kl~yv--GHSQGtt~~fv~lS~~p~~~~kI~~~~aLAP 197 (403)
T KOG2624|consen 126 LSPSSDKEFWDFSWHEMGTYDLPAMIDYILEKTGQE-KLHYV--GHSQGTTTFFVMLSERPEYNKKIKSFIALAP 197 (403)
T ss_pred cCCcCCcceeecchhhhhhcCHHHHHHHHHHhcccc-ceEEE--EEEccchhheehhcccchhhhhhheeeeecc
Confidence 1 1112255655543 4666666654 334 46666 77777543 233344544 7888888843
|
|
| >PF12740 Chlorophyllase2: Chlorophyllase enzyme; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3 | Back alignment and domain information |
|---|
Probab=98.58 E-value=2.2e-06 Score=72.03 Aligned_cols=98 Identities=26% Similarity=0.399 Sum_probs=62.7
Q ss_pred CceEEEEcCCCCCCccchhhHHHhhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH-h---------
Q 022534 35 LGTIVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEELDKLLDV-L--------- 104 (295)
Q Consensus 35 ~~~vv~lHG~~~~~~~w~~~~~~l~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~l~~~~~~-l--------- 104 (295)
=|++||+||+......|..++.+++..||-|+++|+...+..+... .+ ..+..+.+|+.. +
T Consensus 17 yPVv~f~~G~~~~~s~Ys~ll~hvAShGyIVV~~d~~~~~~~~~~~--------~~-~~~~~vi~Wl~~~L~~~l~~~v~ 87 (259)
T PF12740_consen 17 YPVVLFLHGFLLINSWYSQLLEHVASHGYIVVAPDLYSIGGPDDTD--------EV-ASAAEVIDWLAKGLESKLPLGVK 87 (259)
T ss_pred cCEEEEeCCcCCCHHHHHHHHHHHHhCceEEEEecccccCCCCcch--------hH-HHHHHHHHHHHhcchhhcccccc
Confidence 3799999999976666889999999999999999977644322110 12 223333343332 1
Q ss_pred -CCCCceEEEEecccchH-HHHHHHHhC-----cCccceeEEEcCCCC
Q 022534 105 -EVKYPFFLVVQGFLVGS-YGLTWALKN-----PSRISKLAILNSPLT 145 (295)
Q Consensus 105 -~~~~~~~lv~~G~~~G~-~~~~~a~~~-----p~~v~~lil~~~p~~ 145 (295)
+..+ +.| .|||-|+ .+...++.+ +.+++++++++ |..
T Consensus 88 ~D~s~-l~l--~GHSrGGk~Af~~al~~~~~~~~~~~~ali~lD-PVd 131 (259)
T PF12740_consen 88 PDFSK-LAL--AGHSRGGKVAFAMALGNASSSLDLRFSALILLD-PVD 131 (259)
T ss_pred ccccc-eEE--eeeCCCCHHHHHHHhhhcccccccceeEEEEec-ccc
Confidence 1122 333 3788654 555666665 56899999885 444
|
1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process |
| >PF07819 PGAP1: PGAP1-like protein; InterPro: IPR012908 The sequences found in this family are similar to PGAP1 (Q765A7 from SWISSPROT) | Back alignment and domain information |
|---|
Probab=98.54 E-value=9.4e-07 Score=73.70 Aligned_cols=103 Identities=20% Similarity=0.271 Sum_probs=65.1
Q ss_pred CceEEEEcCCCCCCccchhhHHHhh--------hCCCeEEEeCCCCCCCCCCCCCCCCCCCCCHHH----HHHHHHHHHH
Q 022534 35 LGTIVFLHGAPSHSYSYRNVMSQMS--------DAGFHCFAPDWLGFGFSDKPEKGYDDFDFTENE----FHEELDKLLD 102 (295)
Q Consensus 35 ~~~vv~lHG~~~~~~~w~~~~~~l~--------~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~----~~~~l~~~~~ 102 (295)
+.||||+||.+++...|+.+...+. ...+++++.|+....-.-.. ..+.+ ..+.+..+++
T Consensus 4 g~pVlFIhG~~Gs~~q~rsl~~~~~~~~~~~~~~~~~d~ft~df~~~~s~~~g--------~~l~~q~~~~~~~i~~i~~ 75 (225)
T PF07819_consen 4 GIPVLFIHGNAGSYKQVRSLASELQRKALLNDNSSHFDFFTVDFNEELSAFHG--------RTLQRQAEFLAEAIKYILE 75 (225)
T ss_pred CCEEEEECcCCCCHhHHHHHHHHHhhhhhhccCccceeEEEeccCcccccccc--------ccHHHHHHHHHHHHHHHHH
Confidence 4599999999999888877765552 22588999998765322111 02222 2334444444
Q ss_pred Hh----CCCCceEEEEecccchHHHHHHHHhC----cCccceeEEEcCCCCCC
Q 022534 103 VL----EVKYPFFLVVQGFLVGSYGLTWALKN----PSRISKLAILNSPLTAS 147 (295)
Q Consensus 103 ~l----~~~~~~~lv~~G~~~G~~~~~~a~~~----p~~v~~lil~~~p~~~~ 147 (295)
.. .-.+++++| |||+|++.+..++.. ++.|+.++.+++|....
T Consensus 76 ~~~~~~~~~~~vilV--gHSmGGlvar~~l~~~~~~~~~v~~iitl~tPh~g~ 126 (225)
T PF07819_consen 76 LYKSNRPPPRSVILV--GHSMGGLVARSALSLPNYDPDSVKTIITLGTPHRGS 126 (225)
T ss_pred hhhhccCCCCceEEE--EEchhhHHHHHHHhccccccccEEEEEEEcCCCCCc
Confidence 44 223457777 778887655554433 35799999999887654
|
This is an endoplasmic reticulum membrane protein with a catalytic serine-containing motif that is conserved in a number of lipases. PGAP1 functions as a GPI inositol-deacylase; this deacylation is important for the efficient transport of GPI-anchored proteins from the endoplasmic reticulum to the Golgi body [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006505 GPI anchor metabolic process, 0006886 intracellular protein transport, 0031227 intrinsic to endoplasmic reticulum membrane |
| >PRK05371 x-prolyl-dipeptidyl aminopeptidase; Provisional | Back alignment and domain information |
|---|
Probab=98.38 E-value=1.5e-05 Score=77.81 Aligned_cols=62 Identities=18% Similarity=0.159 Sum_probs=43.5
Q ss_pred CCCCcEEEEEeCCCCCCCcchHHHHHhcC---CCCeEEEEecCCCCCCC-CCChHHHHHHHHHHHHh
Q 022534 231 SWDKPVLVAWGISDKYLPQSVAEEFQKGN---PNVVKLQMIEGAGHMPQ-EDWPEKVVDGLRYFFLN 293 (295)
Q Consensus 231 ~~~~P~l~i~G~~D~~~~~~~~~~~~~~~---~~~~~~~~i~~~gH~~~-~e~p~~~~~~i~~fl~~ 293 (295)
++++|+|+|+|..|..+++..+.++.+.+ +...++.+. ..+|... ...+.++.+.+..|+..
T Consensus 453 kIkvPvLlIhGw~D~~V~~~~s~~ly~aL~~~g~pkkL~l~-~g~H~~~~~~~~~d~~e~~~~Wfd~ 518 (767)
T PRK05371 453 KIKASVLVVHGLNDWNVKPKQVYQWWDALPENGVPKKLFLH-QGGHVYPNNWQSIDFRDTMNAWFTH 518 (767)
T ss_pred CCCCCEEEEeeCCCCCCChHHHHHHHHHHHhcCCCeEEEEe-CCCccCCCchhHHHHHHHHHHHHHh
Confidence 78999999999999999877665555443 223466554 4578543 34567778888888865
|
|
| >PF10503 Esterase_phd: Esterase PHB depolymerase | Back alignment and domain information |
|---|
Probab=98.37 E-value=3.3e-05 Score=63.86 Aligned_cols=118 Identities=15% Similarity=0.238 Sum_probs=65.7
Q ss_pred EEEEEEEcCCCCCCCceEEEEcCCCCCCccchhh--HHHhhh-CCCeEEEeCCCCCCCCCC-----CCCCCCCCCCCHHH
Q 022534 21 YRWFVRETGSADSRLGTIVFLHGAPSHSYSYRNV--MSQMSD-AGFHCFAPDWLGFGFSDK-----PEKGYDDFDFTENE 92 (295)
Q Consensus 21 ~~~~~~~~g~~~~~~~~vv~lHG~~~~~~~w~~~--~~~l~~-~~~~via~Dl~G~G~S~~-----~~~~~~~~~~~~~~ 92 (295)
|++|+-. +.+..+.|.||+|||.+++...+... +..|++ .||-|+.|+...-..+.. ......+.. ....
T Consensus 3 Y~lYvP~-~~~~~~~PLVv~LHG~~~~a~~~~~~s~~~~lAd~~GfivvyP~~~~~~~~~~cw~w~~~~~~~g~~-d~~~ 80 (220)
T PF10503_consen 3 YRLYVPP-GAPRGPVPLVVVLHGCGQSAEDFAAGSGWNALADREGFIVVYPEQSRRANPQGCWNWFSDDQQRGGG-DVAF 80 (220)
T ss_pred EEEecCC-CCCCCCCCEEEEeCCCCCCHHHHHhhcCHHHHhhcCCeEEEcccccccCCCCCcccccccccccCcc-chhh
Confidence 4455433 22222357899999999877654431 233543 489999999753211110 000000000 1122
Q ss_pred HHHHHHHHHHHhCCCC-ceEEEEecccc-hHHHHHHHHhCcCccceeEEEcC
Q 022534 93 FHEELDKLLDVLEVKY-PFFLVVQGFLV-GSYGLTWALKNPSRISKLAILNS 142 (295)
Q Consensus 93 ~~~~l~~~~~~l~~~~-~~~lv~~G~~~-G~~~~~~a~~~p~~v~~lil~~~ 142 (295)
++..+.++.++.+++. .+++. |+|. |+++..++..|||.+.++.+.+.
T Consensus 81 i~~lv~~v~~~~~iD~~RVyv~--G~S~Gg~ma~~la~~~pd~faa~a~~sG 130 (220)
T PF10503_consen 81 IAALVDYVAARYNIDPSRVYVT--GLSNGGMMANVLACAYPDLFAAVAVVSG 130 (220)
T ss_pred HHHHHHhHhhhcccCCCceeeE--EECHHHHHHHHHHHhCCccceEEEeecc
Confidence 3444555555555542 24444 6765 46788889999999999887754
|
|
| >PF07859 Abhydrolase_3: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases | Back alignment and domain information |
|---|
Probab=98.35 E-value=5.7e-06 Score=68.17 Aligned_cols=95 Identities=19% Similarity=0.323 Sum_probs=49.4
Q ss_pred EEEEcCCC---CCCccchhhHHHhhh-CCCeEEEeCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH---hCCC-Cc
Q 022534 38 IVFLHGAP---SHSYSYRNVMSQMSD-AGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEELDKLLDV---LEVK-YP 109 (295)
Q Consensus 38 vv~lHG~~---~~~~~w~~~~~~l~~-~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~l~~~~~~---l~~~-~~ 109 (295)
||++||++ ++......+...|++ .|+.|+.+|.|=. |...+ .-.++|..+.+..+++. ++.+ ..
T Consensus 1 v~~~HGGg~~~g~~~~~~~~~~~la~~~g~~v~~~~Yrl~-----p~~~~---p~~~~D~~~a~~~l~~~~~~~~~d~~~ 72 (211)
T PF07859_consen 1 VVYIHGGGWVMGSKESHWPFAARLAAERGFVVVSIDYRLA-----PEAPF---PAALEDVKAAYRWLLKNADKLGIDPER 72 (211)
T ss_dssp EEEE--STTTSCGTTTHHHHHHHHHHHHTSEEEEEE---T-----TTSST---THHHHHHHHHHHHHHHTHHHHTEEEEE
T ss_pred CEEECCcccccCChHHHHHHHHHHHhhccEEEEEeecccc-----ccccc---cccccccccceeeeccccccccccccc
Confidence 78999975 344444455566664 6999999999933 22111 11234444444445554 2222 23
Q ss_pred eEEEEecccc-hHHHHHHHHhCcC----ccceeEEEcC
Q 022534 110 FFLVVQGFLV-GSYGLTWALKNPS----RISKLAILNS 142 (295)
Q Consensus 110 ~~lv~~G~~~-G~~~~~~a~~~p~----~v~~lil~~~ 142 (295)
++++ |+|. |.+++.++.+..+ .+++++++++
T Consensus 73 i~l~--G~SAGg~la~~~~~~~~~~~~~~~~~~~~~~p 108 (211)
T PF07859_consen 73 IVLI--GDSAGGHLALSLALRARDRGLPKPKGIILISP 108 (211)
T ss_dssp EEEE--EETHHHHHHHHHHHHHHHTTTCHESEEEEESC
T ss_pred eEEe--ecccccchhhhhhhhhhhhcccchhhhhcccc
Confidence 5665 6665 4577666553222 4788888743
|
; InterPro: IPR013094 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents the catalytic domain fold-3 of alpha/beta hydrolase. ; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 3D7R_B 2C7B_B 3ZWQ_B 2YH2_B 3BXP_A 3D3N_A 1LZK_A 1LZL_A 2O7V_A 2O7R_A .... |
| >KOG3043 consensus Predicted hydrolase related to dienelactone hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.34 E-value=5.9e-06 Score=66.92 Aligned_cols=64 Identities=17% Similarity=0.306 Sum_probs=47.0
Q ss_pred CCCCcEEEEEeCCCCCCCcchHHHHHhcCCCC----eEEEEecCCCCCCC-----CCCh------HHHHHHHHHHHHhc
Q 022534 231 SWDKPVLVAWGISDKYLPQSVAEEFQKGNPNV----VKLQMIEGAGHMPQ-----EDWP------EKVVDGLRYFFLNY 294 (295)
Q Consensus 231 ~~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~----~~~~~i~~~gH~~~-----~e~p------~~~~~~i~~fl~~~ 294 (295)
..++|+|++.|+.|..+|++....+.+.+.+. .++.++++.+|-.+ .+.| |+....+.+|+.+|
T Consensus 162 ~vk~Pilfl~ae~D~~~p~~~v~~~ee~lk~~~~~~~~v~~f~g~~HGf~~~r~~~~~Ped~~~~eea~~~~~~Wf~~y 240 (242)
T KOG3043|consen 162 NVKAPILFLFAELDEDVPPKDVKAWEEKLKENPAVGSQVKTFSGVGHGFVARRANISSPEDKKAAEEAYQRFISWFKHY 240 (242)
T ss_pred cCCCCEEEEeecccccCCHHHHHHHHHHHhcCcccceeEEEcCCccchhhhhccCCCChhHHHHHHHHHHHHHHHHHHh
Confidence 44799999999999999988776665544332 26999999999544 3344 46666777777765
|
|
| >PF09752 DUF2048: Uncharacterized conserved protein (DUF2048); InterPro: IPR019149 This family of proteins has no known function | Back alignment and domain information |
|---|
Probab=98.28 E-value=0.0001 Score=64.23 Aligned_cols=242 Identities=14% Similarity=0.153 Sum_probs=121.3
Q ss_pred CCCceEEEEcCCCCCCccch-hh-HHHhhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCCHHHHH----------HHHHHH
Q 022534 33 SRLGTIVFLHGAPSHSYSYR-NV-MSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFH----------EELDKL 100 (295)
Q Consensus 33 ~~~~~vv~lHG~~~~~~~w~-~~-~~~l~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~----------~~l~~~ 100 (295)
+.+|..|.|.|-+++....+ .+ +..|.+.|+..+.+--|=||.-..+.... +...+..|+. +.|..+
T Consensus 90 ~~rp~~IhLagTGDh~f~rR~~l~a~pLl~~gi~s~~le~Pyyg~RkP~~Q~~-s~l~~VsDl~~~g~~~i~E~~~Ll~W 168 (348)
T PF09752_consen 90 PYRPVCIHLAGTGDHGFWRRRRLMARPLLKEGIASLILENPYYGQRKPKDQRR-SSLRNVSDLFVMGRATILESRALLHW 168 (348)
T ss_pred CCCceEEEecCCCccchhhhhhhhhhHHHHcCcceEEEecccccccChhHhhc-ccccchhHHHHHHhHHHHHHHHHHHH
Confidence 34678888889888665444 33 56676679999999999998654322211 1122333432 223344
Q ss_pred HHHhCCCCceEEEEecccch-HHHHHHHHhCcCccceeEEEcCCCCCC-CCCchhhhh-hhcccchhhhhhhHHHHHHHH
Q 022534 101 LDVLEVKYPFFLVVQGFLVG-SYGLTWALKNPSRISKLAILNSPLTAS-SPLPGLFQQ-LRIPLLGEFTAQNAIMAERFI 177 (295)
Q Consensus 101 ~~~l~~~~~~~lv~~G~~~G-~~~~~~a~~~p~~v~~lil~~~p~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 177 (295)
++.-|.. ++-+. |.|+| .+|.+.|...|..|..+-+++ +.... ....+.... ..+..+.+. ..+....+.
T Consensus 169 l~~~G~~-~~g~~--G~SmGG~~A~laa~~~p~pv~~vp~ls-~~sAs~vFt~Gvls~~i~W~~L~~q-~~~~~~~~~-- 241 (348)
T PF09752_consen 169 LEREGYG-PLGLT--GISMGGHMAALAASNWPRPVALVPCLS-WSSASVVFTEGVLSNSINWDALEKQ-FEDTVYEEE-- 241 (348)
T ss_pred HHhcCCC-ceEEE--EechhHhhHHhhhhcCCCceeEEEeec-ccCCCcchhhhhhhcCCCHHHHHHH-hcccchhhh--
Confidence 4444555 44444 77765 567777888998776444553 22221 111221111 001000000 000000000
Q ss_pred HhCCCccccccccccccccccccCCchhHHHHHHHhcchhhhhHhhhcCcCCCCCCCcEEEEEeCCCCCCCcchHHHHHh
Q 022534 178 EAGSPYVLKLDKADVYRLPYLASSGPGFALLEAARKVNFKDISSRIGAGFSSGSWDKPVLVAWGISDKYLPQSVAEEFQK 257 (295)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~ 257 (295)
.+..-... ...............+....+.. ..+....+ .++....-.-.+.++.+++|..+|......+.+
T Consensus 242 ---~~~~~~~~--~~~~~~~~~~~~~~~Ea~~~m~~--~md~~T~l-~nf~~P~dp~~ii~V~A~~DaYVPr~~v~~Lq~ 313 (348)
T PF09752_consen 242 ---ISDIPAQN--KSLPLDSMEERRRDREALRFMRG--VMDSFTHL-TNFPVPVDPSAIIFVAAKNDAYVPRHGVLSLQE 313 (348)
T ss_pred ---hcccccCc--ccccchhhccccchHHHHHHHHH--HHHhhccc-cccCCCCCCCcEEEEEecCceEechhhcchHHH
Confidence 00000000 00000000000000111111111 11111111 122222224568899999999999888889999
Q ss_pred cCCCCeEEEEecCCCCCC-CCCChHHHHHHHHHHHH
Q 022534 258 GNPNVVKLQMIEGAGHMP-QEDWPEKVVDGLRYFFL 292 (295)
Q Consensus 258 ~~~~~~~~~~i~~~gH~~-~~e~p~~~~~~i~~fl~ 292 (295)
.-|. +++..+++ ||.. .+-+.+.|..+|.+-++
T Consensus 314 ~WPG-sEvR~l~g-GHVsA~L~~q~~fR~AI~Daf~ 347 (348)
T PF09752_consen 314 IWPG-SEVRYLPG-GHVSAYLLHQEAFRQAIYDAFE 347 (348)
T ss_pred hCCC-CeEEEecC-CcEEEeeechHHHHHHHHHHhh
Confidence 8986 89999987 9964 66677888888887654
|
|
| >smart00824 PKS_TE Thioesterase | Back alignment and domain information |
|---|
Probab=98.27 E-value=2.7e-05 Score=63.46 Aligned_cols=93 Identities=16% Similarity=0.187 Sum_probs=61.3
Q ss_pred EEcCCC--CCCccchhhHHHhhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCceEEEEecc
Q 022534 40 FLHGAP--SHSYSYRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEELDKLLDVLEVKYPFFLVVQGF 117 (295)
Q Consensus 40 ~lHG~~--~~~~~w~~~~~~l~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~~lv~~G~ 117 (295)
++|..+ ++...|..+...|.. .+.|+++|++|+|.++.... +.+.++..+.+.+.......+++++ ||
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~l~~-~~~v~~~~~~g~~~~~~~~~-------~~~~~~~~~~~~l~~~~~~~~~~l~--g~ 71 (212)
T smart00824 2 CFPSTAAPSGPHEYARLAAALRG-RRDVSALPLPGFGPGEPLPA-------SADALVEAQAEAVLRAAGGRPFVLV--GH 71 (212)
T ss_pred ccCCCCCCCcHHHHHHHHHhcCC-CccEEEecCCCCCCCCCCCC-------CHHHHHHHHHHHHHHhcCCCCeEEE--EE
Confidence 344433 566789999999975 69999999999997764321 3456666555544443334467776 67
Q ss_pred cchH-HHHHHHHh---CcCccceeEEEcC
Q 022534 118 LVGS-YGLTWALK---NPSRISKLAILNS 142 (295)
Q Consensus 118 ~~G~-~~~~~a~~---~p~~v~~lil~~~ 142 (295)
|+|+ ++...+.. .++.+.+++++++
T Consensus 72 s~Gg~~a~~~a~~l~~~~~~~~~l~~~~~ 100 (212)
T smart00824 72 SSGGLLAHAVAARLEARGIPPAAVVLLDT 100 (212)
T ss_pred CHHHHHHHHHHHHHHhCCCCCcEEEEEcc
Confidence 7664 45455443 5667888988764
|
Peptide synthetases are involved in the non-ribosomal synthesis of peptide antibiotics. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates. There are also modules within the peptide synthetases that also share this similarity. With respect to antibiotic production, thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Thioesterases (non-integrated) have molecular masses of 25-29 kDa. |
| >PLN02733 phosphatidylcholine-sterol O-acyltransferase | Back alignment and domain information |
|---|
Probab=98.27 E-value=3.8e-06 Score=76.59 Aligned_cols=95 Identities=12% Similarity=0.289 Sum_probs=65.4
Q ss_pred CCCccchhhHHHhhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCceEEEEecccchH-HHH
Q 022534 46 SHSYSYRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEELDKLLDVLEVKYPFFLVVQGFLVGS-YGL 124 (295)
Q Consensus 46 ~~~~~w~~~~~~l~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~~lv~~G~~~G~-~~~ 124 (295)
.....|..+++.|.+.||.+ ..|++|+|.+.++... .+...+++.+.|.++.++.+.+ +++|+ |||+|+ ++.
T Consensus 105 ~~~~~~~~li~~L~~~GY~~-~~dL~g~gYDwR~~~~---~~~~~~~Lk~lIe~~~~~~g~~-kV~LV--GHSMGGlva~ 177 (440)
T PLN02733 105 DEVYYFHDMIEQLIKWGYKE-GKTLFGFGYDFRQSNR---LPETMDGLKKKLETVYKASGGK-KVNII--SHSMGGLLVK 177 (440)
T ss_pred chHHHHHHHHHHHHHcCCcc-CCCcccCCCCcccccc---HHHHHHHHHHHHHHHHHHcCCC-CEEEE--EECHhHHHHH
Confidence 45678999999999888765 8999999999875311 1112344455555555555544 57777 778776 466
Q ss_pred HHHHhCcCc----cceeEEEcCCCCCC
Q 022534 125 TWALKNPSR----ISKLAILNSPLTAS 147 (295)
Q Consensus 125 ~~a~~~p~~----v~~lil~~~p~~~~ 147 (295)
.++..+|+. |+++|.+++|....
T Consensus 178 ~fl~~~p~~~~k~I~~~I~la~P~~Gs 204 (440)
T PLN02733 178 CFMSLHSDVFEKYVNSWIAIAAPFQGA 204 (440)
T ss_pred HHHHHCCHhHHhHhccEEEECCCCCCC
Confidence 677777764 78888998887654
|
|
| >PF07224 Chlorophyllase: Chlorophyllase; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3 | Back alignment and domain information |
|---|
Probab=98.24 E-value=1.4e-05 Score=66.41 Aligned_cols=37 Identities=27% Similarity=0.502 Sum_probs=34.4
Q ss_pred ceEEEEcCCCCCCccchhhHHHhhhCCCeEEEeCCCC
Q 022534 36 GTIVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLG 72 (295)
Q Consensus 36 ~~vv~lHG~~~~~~~w~~~~~~l~~~~~~via~Dl~G 72 (295)
|+|+|+||+.-....|..++.+++..||-|+||++-.
T Consensus 47 PVilF~HG~~l~ns~Ys~lL~HIASHGfIVVAPQl~~ 83 (307)
T PF07224_consen 47 PVILFLHGFNLYNSFYSQLLAHIASHGFIVVAPQLYT 83 (307)
T ss_pred cEEEEeechhhhhHHHHHHHHHHhhcCeEEEechhhc
Confidence 6899999999999999999999999999999999974
|
1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process |
| >KOG1515 consensus Arylacetamide deacetylase [Defense mechanisms] | Back alignment and domain information |
|---|
Probab=98.22 E-value=0.0005 Score=60.51 Aligned_cols=60 Identities=22% Similarity=0.125 Sum_probs=42.8
Q ss_pred CcEEEEEeCCCCCCCcc--hHHHHHhcCCCCeEEEEecCCCCCCCCC-----ChHHHHHHHHHHHHhc
Q 022534 234 KPVLVAWGISDKYLPQS--VAEEFQKGNPNVVKLQMIEGAGHMPQED-----WPEKVVDGLRYFFLNY 294 (295)
Q Consensus 234 ~P~l~i~G~~D~~~~~~--~~~~~~~~~~~~~~~~~i~~~gH~~~~e-----~p~~~~~~i~~fl~~~ 294 (295)
.|+|++.++.|.+.+.. .++++++.-- ..++..++++.|..++- ...++.+.|..|+..+
T Consensus 269 p~tlv~~ag~D~L~D~~~~Y~~~Lkk~Gv-~v~~~~~e~~~H~~~~~~~~~~~a~~~~~~i~~fi~~~ 335 (336)
T KOG1515|consen 269 PPTLVVVAGYDVLRDEGLAYAEKLKKAGV-EVTLIHYEDGFHGFHILDPSSKEAHALMDAIVEFIKSN 335 (336)
T ss_pred CceEEEEeCchhhhhhhHHHHHHHHHcCC-eEEEEEECCCeeEEEecCCchhhHHHHHHHHHHHHhhc
Confidence 35999999999887533 4566655433 35778999999965443 4457888888888753
|
|
| >PF06028 DUF915: Alpha/beta hydrolase of unknown function (DUF915); InterPro: IPR010315 This family consists of bacterial proteins of unknown function, which are hydrolase-like | Back alignment and domain information |
|---|
Probab=98.17 E-value=0.0001 Score=62.44 Aligned_cols=205 Identities=18% Similarity=0.228 Sum_probs=106.7
Q ss_pred CceEEEEcCCCCCCccchhhHHHhh-hCC--CeEEEe--CCCC------CCCC--CCCC---CCCCCCCCCHHHHHHHHH
Q 022534 35 LGTIVFLHGAPSHSYSYRNVMSQMS-DAG--FHCFAP--DWLG------FGFS--DKPE---KGYDDFDFTENEFHEELD 98 (295)
Q Consensus 35 ~~~vv~lHG~~~~~~~w~~~~~~l~-~~~--~~via~--Dl~G------~G~S--~~~~---~~~~~~~~~~~~~~~~l~ 98 (295)
..|.||+||++++..++..++..+. +.+ -.++.. +-=| .=.. ..|- ...++.+-+....+..+.
T Consensus 11 ~tPTifihG~~gt~~s~~~mi~~~~~~~~~~~~~l~v~V~~~G~v~~~G~~~~~~~nPiIqV~F~~n~~~~~~~qa~wl~ 90 (255)
T PF06028_consen 11 TTPTIFIHGYGGTANSFNHMINRLENKQGVAQKVLTVTVSKNGKVKVSGKLSKNAKNPIIQVNFEDNRNANYKKQAKWLK 90 (255)
T ss_dssp -EEEEEE--TTGGCCCCHHHHHHHHHCSTS-S-EEEEEEETTSEEEEES---TT-SS-EEEEEESSTT-CHHHHHHHHHH
T ss_pred CCcEEEECCCCCChhHHHHHHHHHHhhcCCCceEEEEEECCCCeEEEeeecCCCCCCCEEEEEecCCCcCCHHHHHHHHH
Confidence 3589999999999999999999996 433 223222 2222 1111 1110 001122224566777888
Q ss_pred HHHHHh----CCCCceEEEEecccchHHHH-HHHHhCcC-----ccceeEEEcCCCCCCCCCchhhhhhhcccchhhhhh
Q 022534 99 KLLDVL----EVKYPFFLVVQGFLVGSYGL-TWALKNPS-----RISKLAILNSPLTASSPLPGLFQQLRIPLLGEFTAQ 168 (295)
Q Consensus 99 ~~~~~l----~~~~~~~lv~~G~~~G~~~~-~~a~~~p~-----~v~~lil~~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (295)
.++..| ++++ +-+| |||+|++++ .++..+-. ++.++|.+++|+.............
T Consensus 91 ~vl~~L~~~Y~~~~-~N~V--GHSmGg~~~~~yl~~~~~~~~~P~l~K~V~Ia~pfng~~~~~~~~~~~----------- 156 (255)
T PF06028_consen 91 KVLKYLKKKYHFKK-FNLV--GHSMGGLSWTYYLENYGNDKNLPKLNKLVTIAGPFNGILGMNDDQNQN----------- 156 (255)
T ss_dssp HHHHHHHHCC--SE-EEEE--EETHHHHHHHHHHHHCTTGTTS-EEEEEEEES--TTTTTCCSC-TTTT-----------
T ss_pred HHHHHHHHhcCCCE-EeEE--EECccHHHHHHHHHHhccCCCCcccceEEEeccccCccccccccchhh-----------
Confidence 777776 4554 5666 778887654 34444211 5899999988876532111000000
Q ss_pred hHHHHHHHHHhCCCccccccccccccccccccCCchhHHHHHHHhcchhhh-hHhhhcCcCCCCCCCcEEEEEeC-----
Q 022534 169 NAIMAERFIEAGSPYVLKLDKADVYRLPYLASSGPGFALLEAARKVNFKDI-SSRIGAGFSSGSWDKPVLVAWGI----- 242 (295)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~P~l~i~G~----- 242 (295)
.....+ |... ...+..+. .. ...+ .-++.+|-|.|+
T Consensus 157 ------~~~~~g-p~~~-------------------~~~y~~l~-----~~~~~~~-------p~~i~VLnI~G~~~~g~ 198 (255)
T PF06028_consen 157 ------DLNKNG-PKSM-------------------TPMYQDLL-----KNRRKNF-------PKNIQVLNIYGDLEDGS 198 (255)
T ss_dssp -------CSTT--BSS---------------------HHHHHHH-----HTHGGGS-------TTT-EEEEEEEESBTTC
T ss_pred ------hhcccC-Cccc-------------------CHHHHHHH-----HHHHhhC-------CCCeEEEEEecccCCCC
Confidence 000000 1000 01111110 11 1111 226889999999
Q ss_pred -CCCCCCcchHHHHHhcCCC---CeEEEEecC--CCCCCCCCChHHHHHHHHHHHH
Q 022534 243 -SDKYLPQSVAEEFQKGNPN---VVKLQMIEG--AGHMPQEDWPEKVVDGLRYFFL 292 (295)
Q Consensus 243 -~D~~~~~~~~~~~~~~~~~---~~~~~~i~~--~gH~~~~e~p~~~~~~i~~fl~ 292 (295)
.|..+|...+..+...+.+ .-+-.++.| +.|.-.-|+| ++.+.|..||-
T Consensus 199 ~sDG~V~~~Ss~sl~~L~~~~~~~Y~e~~v~G~~a~HS~LheN~-~V~~~I~~FLw 253 (255)
T PF06028_consen 199 NSDGIVPNASSLSLRYLLKNRAKSYQEKTVTGKDAQHSQLHENP-QVDKLIIQFLW 253 (255)
T ss_dssp SBTSSSBHHHHCTHHHHCTTTSSEEEEEEEESGGGSCCGGGCCH-HHHHHHHHHHC
T ss_pred CCCeEEeHHHHHHHHHHhhcccCceEEEEEECCCCccccCCCCH-HHHHHHHHHhc
Confidence 7889988877766666543 235566654 6898766777 46688999873
|
; PDB: 3LP5_A 3FLE_A 3DS8_A. |
| >PF03959 FSH1: Serine hydrolase (FSH1); InterPro: IPR005645 This entry represents proteins belonging to the AB hydrolase family | Back alignment and domain information |
|---|
Probab=98.15 E-value=4.2e-06 Score=69.24 Aligned_cols=49 Identities=16% Similarity=0.167 Sum_probs=31.8
Q ss_pred CCCCcEEEEEeCCCCCCCcchHHHHHhcCCCCeEEEEecCCCCCCCCCCh
Q 022534 231 SWDKPVLVAWGISDKYLPQSVAEEFQKGNPNVVKLQMIEGAGHMPQEDWP 280 (295)
Q Consensus 231 ~~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p 280 (295)
++++|+|-|+|++|++++++.+..+.+.+.++.+++..+ .||.++...+
T Consensus 159 ~i~iPtlHv~G~~D~~~~~~~s~~L~~~~~~~~~v~~h~-gGH~vP~~~~ 207 (212)
T PF03959_consen 159 KISIPTLHVIGENDPVVPPERSEALAEMFDPDARVIEHD-GGHHVPRKKE 207 (212)
T ss_dssp T---EEEEEEETT-SSS-HHHHHHHHHHHHHHEEEEEES-SSSS----HH
T ss_pred cCCCCeEEEEeCCCCCcchHHHHHHHHhccCCcEEEEEC-CCCcCcCChh
Confidence 568999999999999999888888888776435777776 5887765543
|
It consists of serine hydrolases of unknown specificity [, ] and includes uncharacterised proteins.; PDB: 1YCD_A. |
| >PF00450 Peptidase_S10: Serine carboxypeptidase; InterPro: IPR001563 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families | Back alignment and domain information |
|---|
Probab=98.11 E-value=0.00014 Score=66.37 Aligned_cols=61 Identities=25% Similarity=0.279 Sum_probs=45.7
Q ss_pred CCcEEEEEeCCCCCCCcchHHHHHhcCC-------------------------CCeEEEEecCCCCCCCCCChHHHHHHH
Q 022534 233 DKPVLVAWGISDKYLPQSVAEEFQKGNP-------------------------NVVKLQMIEGAGHMPQEDWPEKVVDGL 287 (295)
Q Consensus 233 ~~P~l~i~G~~D~~~~~~~~~~~~~~~~-------------------------~~~~~~~i~~~gH~~~~e~p~~~~~~i 287 (295)
++++|+..|+.|.+++...++...+.+. .+.+++.|.+|||+++.++|++..+.+
T Consensus 330 ~irVLiy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~f~~~~~~~~~~~~G~~k~~~~ltf~~V~~AGHmvP~dqP~~a~~m~ 409 (415)
T PF00450_consen 330 GIRVLIYNGDLDLICNFLGTERWIDNLNWSGKDGFRQWPRKVNGQVAGYVKQYGNLTFVTVRGAGHMVPQDQPEAALQMF 409 (415)
T ss_dssp T-EEEEEEETT-SSS-HHHHHHHHHCTECTEEEEEEEEEEETTCSEEEEEEEETTEEEEEETT--SSHHHHSHHHHHHHH
T ss_pred cceeEEeccCCCEEEEeccchhhhhccccCcccccccccccccccccceeEEeccEEEEEEcCCcccChhhCHHHHHHHH
Confidence 4999999999999998777666554432 124688999999999999999999999
Q ss_pred HHHHHh
Q 022534 288 RYFFLN 293 (295)
Q Consensus 288 ~~fl~~ 293 (295)
+.||.+
T Consensus 410 ~~fl~g 415 (415)
T PF00450_consen 410 RRFLKG 415 (415)
T ss_dssp HHHHCT
T ss_pred HHHhcC
Confidence 999864
|
Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S10 (clan SC). The type example is carboxypeptidase Y from Saccharomyces cerevisiae (Baker's yeast) []. All known carboxypeptidases are either metallo carboxypeptidases or serine carboxypeptidases (3.4.16.5 from EC and 3.4.16.6 from EC). The catalytic activity of the serine carboxypeptidases, like that of the trypsin family serine proteases, is provided by a charge relay system involving an aspartic acid residue hydrogen-bonded to a histidine, which is itself hydrogen-bonded to a serine []. The sequences surrounding the active site serine and histidine residues are highly conserved in all the serine carboxypeptidases.; GO: 0004185 serine-type carboxypeptidase activity, 0006508 proteolysis; PDB: 1AC5_A 1WHS_B 3SC2_B 1WHT_A 1BCR_A 1BCS_A 1GXS_A 1IVY_A 1WPX_A 1YSC_A .... |
| >PF01674 Lipase_2: Lipase (class 2); InterPro: IPR002918 Lipases or triacylglycerol acylhydrolases hydrolyse ester bonds in triacylglycerol giving diacylglycerol, monoacylglycerol, glycerol and free fatty acids [] | Back alignment and domain information |
|---|
Probab=98.10 E-value=5.5e-06 Score=68.38 Aligned_cols=98 Identities=14% Similarity=0.208 Sum_probs=49.8
Q ss_pred ceEEEEcCCCC-CCccchhhHHHhhhCCCe---EEEeCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCceE
Q 022534 36 GTIVFLHGAPS-HSYSYRNVMSQMSDAGFH---CFAPDWLGFGFSDKPEKGYDDFDFTENEFHEELDKLLDVLEVKYPFF 111 (295)
Q Consensus 36 ~~vv~lHG~~~-~~~~w~~~~~~l~~~~~~---via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~~ 111 (295)
.||||+||.++ ....|..+++.|+++||. |+++++-....+.........-+ +..++.+.|+.+++.-+- + +-
T Consensus 2 ~PVVlVHG~~~~~~~~w~~~~~~l~~~GY~~~~vya~tyg~~~~~~~~~~~~~~~~-~~~~l~~fI~~Vl~~TGa-k-VD 78 (219)
T PF01674_consen 2 RPVVLVHGTGGNAYSNWSTLAPYLKAAGYCDSEVYALTYGSGNGSPSVQNAHMSCE-SAKQLRAFIDAVLAYTGA-K-VD 78 (219)
T ss_dssp --EEEE--TTTTTCGGCCHHHHHHHHTT--CCCEEEE--S-CCHHTHHHHHHB-HH-HHHHHHHHHHHHHHHHT----EE
T ss_pred CCEEEECCCCcchhhCHHHHHHHHHHcCCCcceeEeccCCCCCCCCcccccccchh-hHHHHHHHHHHHHHhhCC-E-EE
Confidence 38999999998 667899999999999999 89999844333221110000000 012334444444444465 4 77
Q ss_pred EEEecccchHHHHHHHHhCcCccceeE
Q 022534 112 LVVQGFLVGSYGLTWALKNPSRISKLA 138 (295)
Q Consensus 112 lv~~G~~~G~~~~~~a~~~p~~v~~li 138 (295)
+| |||+|+.-..+++++-.-++...
T Consensus 79 IV--gHS~G~~iaR~yi~~~~~~d~~~ 103 (219)
T PF01674_consen 79 IV--GHSMGGTIARYYIKGGGGADKVV 103 (219)
T ss_dssp EE--EETCHHHHHHHHHHHCTGGGTEE
T ss_pred EE--EcCCcCHHHHHHHHHcCCCCccc
Confidence 77 77888654555555433333333
|
This group of lipases has been called class 2 as they are not clearly related to other lipase families, and includes LipA and LipB from Bacillus subtilis [] and uncharacterised proteins from Caenorhabditis.; PDB: 2VTV_B 2X76_A 2X5X_A 2QXU_A 3QMM_A 1I6W_A 3D2C_J 2QXT_B 1R50_A 1T2N_A .... |
| >PF08538 DUF1749: Protein of unknown function (DUF1749); InterPro: IPR013744 This is a plant and fungal family of unknown function | Back alignment and domain information |
|---|
Probab=98.08 E-value=0.00022 Score=61.27 Aligned_cols=93 Identities=17% Similarity=0.297 Sum_probs=48.9
Q ss_pred CceEEEEcCCCCCCc---cchhhHHHhhhCCCeEEEeCCC----CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhC--
Q 022534 35 LGTIVFLHGAPSHSY---SYRNVMSQMSDAGFHCFAPDWL----GFGFSDKPEKGYDDFDFTENEFHEELDKLLDVLE-- 105 (295)
Q Consensus 35 ~~~vv~lHG~~~~~~---~w~~~~~~l~~~~~~via~Dl~----G~G~S~~~~~~~~~~~~~~~~~~~~l~~~~~~l~-- 105 (295)
+..||||-|.+..-. ....+++.|.+.++.|+-+-+. |+|-++ +++=+++|.++++.+-
T Consensus 33 ~~~llfIGGLtDGl~tvpY~~~La~aL~~~~wsl~q~~LsSSy~G~G~~S------------L~~D~~eI~~~v~ylr~~ 100 (303)
T PF08538_consen 33 PNALLFIGGLTDGLLTVPYLPDLAEALEETGWSLFQVQLSSSYSGWGTSS------------LDRDVEEIAQLVEYLRSE 100 (303)
T ss_dssp SSEEEEE--TT--TT-STCHHHHHHHHT-TT-EEEEE--GGGBTTS-S--------------HHHHHHHHHHHHHHHHHH
T ss_pred CcEEEEECCCCCCCCCCchHHHHHHHhccCCeEEEEEEecCccCCcCcch------------hhhHHHHHHHHHHHHHHh
Confidence 348999999876332 3446777787668999988664 444333 3333455555555331
Q ss_pred -----CCCceEEEEecccchH-HHHHHHHh-C----cCccceeEEEc
Q 022534 106 -----VKYPFFLVVQGFLVGS-YGLTWALK-N----PSRISKLAILN 141 (295)
Q Consensus 106 -----~~~~~~lv~~G~~~G~-~~~~~a~~-~----p~~v~~lil~~ 141 (295)
-.++++|+ |||.|+ -.+.|..+ . ...|++.|+-+
T Consensus 101 ~~g~~~~~kIVLm--GHSTGcQdvl~Yl~~~~~~~~~~~VdG~ILQA 145 (303)
T PF08538_consen 101 KGGHFGREKIVLM--GHSTGCQDVLHYLSSPNPSPSRPPVDGAILQA 145 (303)
T ss_dssp S------S-EEEE--EECCHHHHHHHHHHH-TT---CCCEEEEEEEE
T ss_pred hccccCCccEEEE--ecCCCcHHHHHHHhccCccccccceEEEEEeC
Confidence 12346676 788887 24455443 2 25799888764
|
This family contains many hypothetical proteins. ; PDB: 2Q0X_B. |
| >COG0657 Aes Esterase/lipase [Lipid metabolism] | Back alignment and domain information |
|---|
Probab=98.03 E-value=0.0015 Score=57.33 Aligned_cols=100 Identities=18% Similarity=0.145 Sum_probs=55.9
Q ss_pred CceEEEEcCCC---CCCccc-hhhHHHhhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH---hCCC
Q 022534 35 LGTIVFLHGAP---SHSYSY-RNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEELDKLLDV---LEVK 107 (295)
Q Consensus 35 ~~~vv~lHG~~---~~~~~w-~~~~~~l~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~l~~~~~~---l~~~ 107 (295)
.|+||++||++ ++.... ..+...+...|+.|+.+|.|---+.. +...+++..+.+..+.+. ++.+
T Consensus 79 ~p~vly~HGGg~~~g~~~~~~~~~~~~~~~~g~~vv~vdYrlaPe~~--------~p~~~~d~~~a~~~l~~~~~~~g~d 150 (312)
T COG0657 79 APVVLYLHGGGWVLGSLRTHDALVARLAAAAGAVVVSVDYRLAPEHP--------FPAALEDAYAAYRWLRANAAELGID 150 (312)
T ss_pred CcEEEEEeCCeeeecChhhhHHHHHHHHHHcCCEEEecCCCCCCCCC--------CCchHHHHHHHHHHHHhhhHhhCCC
Confidence 58999999975 344444 45555556679999999999433321 122345544444444443 3443
Q ss_pred -CceEEEEecccc-hHHHHHHHHhCcC----ccceeEEEcCCCC
Q 022534 108 -YPFFLVVQGFLV-GSYGLTWALKNPS----RISKLAILNSPLT 145 (295)
Q Consensus 108 -~~~~lv~~G~~~-G~~~~~~a~~~p~----~v~~lil~~~p~~ 145 (295)
+.+.+. |+|. |.+++.++..-.+ .....+++ +|..
T Consensus 151 p~~i~v~--GdSAGG~La~~~a~~~~~~~~~~p~~~~li-~P~~ 191 (312)
T COG0657 151 PSRIAVA--GDSAGGHLALALALAARDRGLPLPAAQVLI-SPLL 191 (312)
T ss_pred ccceEEE--ecCcccHHHHHHHHHHHhcCCCCceEEEEE-eccc
Confidence 224443 6664 5666655542211 34566666 4553
|
|
| >PF02129 Peptidase_S15: X-Pro dipeptidyl-peptidase (S15 family); InterPro: IPR000383 This entry represents a domain found peptidases Xaa-Pro dipeptidyl-peptidase and glutaryl-7-aminocephalosporanic-acid acylase, which belong to MEROPS peptidase families S15 and S45 respectively [] | Back alignment and domain information |
|---|
Probab=98.02 E-value=3.3e-05 Score=66.43 Aligned_cols=119 Identities=9% Similarity=0.002 Sum_probs=64.7
Q ss_pred CcEEEEEEEcCC---CCCCCceEEEEcCCCCCC-ccchh---------hHHHhhhCCCeEEEeCCCCCCCCCCCCCCCCC
Q 022534 19 GEYRWFVRETGS---ADSRLGTIVFLHGAPSHS-YSYRN---------VMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDD 85 (295)
Q Consensus 19 ~~~~~~~~~~g~---~~~~~~~vv~lHG~~~~~-~~w~~---------~~~~l~~~~~~via~Dl~G~G~S~~~~~~~~~ 85 (295)
+|+++....+.+ .+.+.|+||..|+++.+. ..+.. ....|+++||-|+..|.||.|.|+......
T Consensus 1 DGv~L~adv~~P~~~~~~~~P~il~~tpY~~~~~~~~~~~~~~~~~~~~~~~~~~~GY~vV~~D~RG~g~S~G~~~~~-- 78 (272)
T PF02129_consen 1 DGVRLAADVYRPGADGGGPFPVILTRTPYGKGDQTASDLAGANPGPPSARRPFAERGYAVVVQDVRGTGGSEGEFDPM-- 78 (272)
T ss_dssp TS-EEEEEEEEE--TTSSSEEEEEEEESSTCTC-HHHHHHTTCHHSHGGGHHHHHTT-EEEEEE-TTSTTS-S-B-TT--
T ss_pred CCCEEEEEEEecCCCCCCcccEEEEccCcCCCCCcccchhhhhcccchhHHHHHhCCCEEEEECCcccccCCCccccC--
Confidence 456666655544 334468899999998543 22221 112277789999999999999999743220
Q ss_pred CCCCHHHHHHHHHHHHHHh---CCC-CceEEEEecccch-HHHHHHHHhCcCccceeEEEcCCCC
Q 022534 86 FDFTENEFHEELDKLLDVL---EVK-YPFFLVVQGFLVG-SYGLTWALKNPSRISKLAILNSPLT 145 (295)
Q Consensus 86 ~~~~~~~~~~~l~~~~~~l---~~~-~~~~lv~~G~~~G-~~~~~~a~~~p~~v~~lil~~~p~~ 145 (295)
. ..-.+|..++|+-+ ... ..+-+. |.|-+ ...+..|+..|..+++++...+...
T Consensus 79 ---~-~~e~~D~~d~I~W~~~Qpws~G~VGm~--G~SY~G~~q~~~A~~~~p~LkAi~p~~~~~d 137 (272)
T PF02129_consen 79 ---S-PNEAQDGYDTIEWIAAQPWSNGKVGMY--GISYGGFTQWAAAARRPPHLKAIVPQSGWSD 137 (272)
T ss_dssp ---S-HHHHHHHHHHHHHHHHCTTEEEEEEEE--EETHHHHHHHHHHTTT-TTEEEEEEESE-SB
T ss_pred ---C-hhHHHHHHHHHHHHHhCCCCCCeEEee--ccCHHHHHHHHHHhcCCCCceEEEecccCCc
Confidence 1 23344444444443 322 234343 44433 3344556668889999887655443
|
It is also found in hydrolases from the CocE/NonD family. Cocaine esterase (CocE) hydrolyzes cocaine endowing the bacteria with the ability to utilise cocaine as a sole source of carbon and energy []. ; GO: 0004177 aminopeptidase activity, 0006508 proteolysis; PDB: 1LNS_A 3PUI_A 3PUH_B 1JU3_A 3I2I_A 3I2G_A 1JU4_A 3I2K_A 3IDA_A 3I2H_A .... |
| >PF08386 Abhydrolase_4: TAP-like protein; InterPro: IPR013595 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families | Back alignment and domain information |
|---|
Probab=97.97 E-value=2.6e-05 Score=56.63 Aligned_cols=60 Identities=25% Similarity=0.339 Sum_probs=53.0
Q ss_pred CCcEEEEEeCCCCCCCcchHHHHHhcCCCCeEEEEecCCCCCCCCCChHHHHHHHHHHHHh
Q 022534 233 DKPVLVAWGISDKYLPQSVAEEFQKGNPNVVKLQMIEGAGHMPQEDWPEKVVDGLRYFFLN 293 (295)
Q Consensus 233 ~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 293 (295)
..|+|+|.++.|+++|.+.+..+++.+++ .+++.+++.||......-.-+.+++.+||.+
T Consensus 34 ~~piL~l~~~~Dp~TP~~~a~~~~~~l~~-s~lvt~~g~gHg~~~~~s~C~~~~v~~yl~~ 93 (103)
T PF08386_consen 34 APPILVLGGTHDPVTPYEGARAMAARLPG-SRLVTVDGAGHGVYAGGSPCVDKAVDDYLLD 93 (103)
T ss_pred CCCEEEEecCcCCCCcHHHHHHHHHHCCC-ceEEEEeccCcceecCCChHHHHHHHHHHHc
Confidence 59999999999999999999999999997 6999999999998764445677888899865
|
Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents a C-terminal domain associated with putative hydrolases and bacterial peptidases that belong to MEROPS peptidase family S33 (clan SC). They are related to a tripeptidyl aminopeptidase from Streptomyces lividans (Q54410 from SWISSPROT). A member of this family (Q6E3K7 from SWISSPROT) is thought to be involved in the C-terminal processing of propionicin F, a bacteriocidin characterised from Propionibacterium freudenreichii []. ; GO: 0008233 peptidase activity |
| >COG4188 Predicted dienelactone hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.93 E-value=5.7e-05 Score=66.08 Aligned_cols=40 Identities=28% Similarity=0.378 Sum_probs=37.3
Q ss_pred CCceEEEEcCCCCCCccchhhHHHhhhCCCeEEEeCCCCC
Q 022534 34 RLGTIVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGF 73 (295)
Q Consensus 34 ~~~~vv~lHG~~~~~~~w~~~~~~l~~~~~~via~Dl~G~ 73 (295)
..|.||+-||.++....+..+++.|++.||-|.++|+||-
T Consensus 70 ~~PlvvlshG~Gs~~~~f~~~A~~lAs~Gf~Va~~~hpgs 109 (365)
T COG4188 70 LLPLVVLSHGSGSYVTGFAWLAEHLASYGFVVAAPDHPGS 109 (365)
T ss_pred cCCeEEecCCCCCCccchhhhHHHHhhCceEEEeccCCCc
Confidence 4689999999999999999999999999999999999983
|
|
| >COG3319 Thioesterase domains of type I polyketide synthases or non-ribosomal peptide synthetases [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=97.93 E-value=0.00011 Score=62.21 Aligned_cols=100 Identities=13% Similarity=0.281 Sum_probs=78.6
Q ss_pred ceEEEEcCCCCCCccchhhHHHhhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCceEEEEe
Q 022534 36 GTIVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEELDKLLDVLEVKYPFFLVVQ 115 (295)
Q Consensus 36 ~~vv~lHG~~~~~~~w~~~~~~l~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~~lv~~ 115 (295)
|||.++|+.+++...|..+...|.. ...|+..+-||+|.-..+. -+++++++...+-|.+..-+.|++|+
T Consensus 1 ~pLF~fhp~~G~~~~~~~L~~~l~~-~~~v~~l~a~g~~~~~~~~-------~~l~~~a~~yv~~Ir~~QP~GPy~L~-- 70 (257)
T COG3319 1 PPLFCFHPAGGSVLAYAPLAAALGP-LLPVYGLQAPGYGAGEQPF-------ASLDDMAAAYVAAIRRVQPEGPYVLL-- 70 (257)
T ss_pred CCEEEEcCCCCcHHHHHHHHHHhcc-CceeeccccCccccccccc-------CCHHHHHHHHHHHHHHhCCCCCEEEE--
Confidence 4899999999999999999999986 5899999999999644322 26788888888888887767788887
Q ss_pred cccch-HHHHHHHHh---CcCccceeEEEcCCCC
Q 022534 116 GFLVG-SYGLTWALK---NPSRISKLAILNSPLT 145 (295)
Q Consensus 116 G~~~G-~~~~~~a~~---~p~~v~~lil~~~p~~ 145 (295)
|||.| .++..+|.+ .-+.|..|++++++..
T Consensus 71 G~S~GG~vA~evA~qL~~~G~~Va~L~llD~~~~ 104 (257)
T COG3319 71 GWSLGGAVAFEVAAQLEAQGEEVAFLGLLDAVPP 104 (257)
T ss_pred eeccccHHHHHHHHHHHhCCCeEEEEEEeccCCC
Confidence 88754 567666642 2347999999987655
|
|
| >COG3545 Predicted esterase of the alpha/beta hydrolase fold [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.92 E-value=0.0017 Score=50.92 Aligned_cols=59 Identities=24% Similarity=0.323 Sum_probs=45.1
Q ss_pred CCCCcEEEEEeCCCCCCCcchHHHHHhcCCCCeEEEEecCCCCCCCC----CChHHHHHHHHHHHH
Q 022534 231 SWDKPVLVAWGISDKYLPQSVAEEFQKGNPNVVKLQMIEGAGHMPQE----DWPEKVVDGLRYFFL 292 (295)
Q Consensus 231 ~~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~----e~p~~~~~~i~~fl~ 292 (295)
..--|.+++..++|++++++.++.+++..+ ..++.+.++||.--. +.|+ ....+..|+.
T Consensus 115 ~lpfps~vvaSrnDp~~~~~~a~~~a~~wg--s~lv~~g~~GHiN~~sG~g~wpe-g~~~l~~~~s 177 (181)
T COG3545 115 PLPFPSVVVASRNDPYVSYEHAEDLANAWG--SALVDVGEGGHINAESGFGPWPE-GYALLAQLLS 177 (181)
T ss_pred cCCCceeEEEecCCCCCCHHHHHHHHHhcc--HhheecccccccchhhcCCCcHH-HHHHHHHHhh
Confidence 345789999999999999999999999887 379999999996533 3454 3455555544
|
|
| >PF03583 LIP: Secretory lipase ; InterPro: IPR005152 This entry represents a family of secreted lipases | Back alignment and domain information |
|---|
Probab=97.85 E-value=0.00071 Score=58.74 Aligned_cols=53 Identities=21% Similarity=0.332 Sum_probs=39.4
Q ss_pred CCCCcEEEEEeCCCCCCCcchHHHHHhc-C--C-CCeEEEEecCCCCCCCC--CChHHH
Q 022534 231 SWDKPVLVAWGISDKYLPQSVAEEFQKG-N--P-NVVKLQMIEGAGHMPQE--DWPEKV 283 (295)
Q Consensus 231 ~~~~P~l~i~G~~D~~~~~~~~~~~~~~-~--~-~~~~~~~i~~~gH~~~~--e~p~~~ 283 (295)
..++|+++.+|..|.++|+..+..+.+. + . .+++++.++..+|.... ..|+.+
T Consensus 217 ~P~~Pv~i~~g~~D~vvP~~~~~~l~~~~c~~G~a~V~~~~~~~~~H~~~~~~~~~~a~ 275 (290)
T PF03583_consen 217 TPTVPVLIYQGTADEVVPPADTDALVAKWCAAGGADVEYVRYPGGGHLGAAFASAPDAL 275 (290)
T ss_pred CCCCCEEEEecCCCCCCChHHHHHHHHHHHHcCCCCEEEEecCCCChhhhhhcCcHHHH
Confidence 5689999999999999998887776532 2 2 24788999999997532 344443
|
Family members include the LIP lipases from Candida albicans, which are expressed and secreted during the infection cycle of these pathogens [].; GO: 0004806 triglyceride lipase activity, 0016042 lipid catabolic process |
| >KOG4627 consensus Kynurenine formamidase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.82 E-value=0.00016 Score=57.93 Aligned_cols=60 Identities=12% Similarity=0.005 Sum_probs=42.4
Q ss_pred CCCCcEEEEEeCCCCCCCcchHHHHHhcCCCCeEEEEecCCCCCCCCCCh----HHHHHHHHHHH
Q 022534 231 SWDKPVLVAWGISDKYLPQSVAEEFQKGNPNVVKLQMIEGAGHMPQEDWP----EKVVDGLRYFF 291 (295)
Q Consensus 231 ~~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p----~~~~~~i~~fl 291 (295)
..++|+|++.|++|.-.-.+..+.|..+..+ +++..++|.+|.-.+|.. -.+...+++|+
T Consensus 205 ~v~~~ilVv~~~~espklieQnrdf~~q~~~-a~~~~f~n~~hy~I~~~~~~~~s~~~~~~~~~~ 268 (270)
T KOG4627|consen 205 DVTVWILVVAAEHESPKLIEQNRDFADQLRK-ASFTLFKNYDHYDIIEETAIDDSDVSRFLRNIE 268 (270)
T ss_pred CceeeeeEeeecccCcHHHHhhhhHHHHhhh-cceeecCCcchhhHHHHhccccchHHHHHHHHh
Confidence 4579999999999964445555667777766 699999999998655543 23444455543
|
|
| >KOG2281 consensus Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=97.78 E-value=0.0019 Score=60.16 Aligned_cols=235 Identities=15% Similarity=0.155 Sum_probs=132.9
Q ss_pred ccceeeEEeCcEEEEEEEcCC----CCCCCceEEEEcCCCC-----CCccchhhH--HHhhhCCCeEEEeCCCCCCCCCC
Q 022534 10 REYGSYIKSGEYRWFVRETGS----ADSRLGTIVFLHGAPS-----HSYSYRNVM--SQMSDAGFHCFAPDWLGFGFSDK 78 (295)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~g~----~~~~~~~vv~lHG~~~-----~~~~w~~~~--~~l~~~~~~via~Dl~G~G~S~~ 78 (295)
|||=.|-.-.|.+++.-.+.+ +..+-|+++++=|+++ +++.|...+ ..|+..||-|+.+|=||--.-..
T Consensus 613 ~eif~fqs~tg~~lYgmiyKPhn~~pgkkYptvl~VYGGP~VQlVnnsfkgi~ylR~~~LaslGy~Vv~IDnRGS~hRGl 692 (867)
T KOG2281|consen 613 PEIFSFQSKTGLTLYGMIYKPHNFQPGKKYPTVLNVYGGPGVQLVNNSFKGIQYLRFCRLASLGYVVVFIDNRGSAHRGL 692 (867)
T ss_pred hhheeeecCCCcEEEEEEEccccCCCCCCCceEEEEcCCCceEEeeccccceehhhhhhhhhcceEEEEEcCCCccccch
Confidence 456566664455555444432 1123589999999986 666665444 45888899999999998654432
Q ss_pred CCCCC--CCC-CCCHHHHHHHHHHHHHHhCCCCceEEEEecccchH-HHHHHHHhCcCccceeEEEcCCCCCCCCCchhh
Q 022534 79 PEKGY--DDF-DFTENEFHEELDKLLDVLEVKYPFFLVVQGFLVGS-YGLTWALKNPSRISKLAILNSPLTASSPLPGLF 154 (295)
Q Consensus 79 ~~~~~--~~~-~~~~~~~~~~l~~~~~~l~~~~~~~lv~~G~~~G~-~~~~~a~~~p~~v~~lil~~~p~~~~~~~~~~~ 154 (295)
+-..+ ... .--++|+++-+.-+.++.|.-+.-.+..||||-|+ ++++..++||+-++ +.+.++|... |. .
T Consensus 693 kFE~~ik~kmGqVE~eDQVeglq~Laeq~gfidmdrV~vhGWSYGGYLSlm~L~~~P~Ifr-vAIAGapVT~---W~-~- 766 (867)
T KOG2281|consen 693 KFESHIKKKMGQVEVEDQVEGLQMLAEQTGFIDMDRVGVHGWSYGGYLSLMGLAQYPNIFR-VAIAGAPVTD---WR-L- 766 (867)
T ss_pred hhHHHHhhccCeeeehhhHHHHHHHHHhcCcccchheeEeccccccHHHHHHhhcCcceee-EEeccCccee---ee-e-
Confidence 11000 000 11347888888888888764333334558998554 57777789998654 6666665532 11 0
Q ss_pred hhhhcccchhhhhhhHHHHHHHHHhCCCccccccccccccccccccCCchhHHHHHHHhcchhhhhHhhhcCcCCCCCCC
Q 022534 155 QQLRIPLLGEFTAQNAIMAERFIEAGSPYVLKLDKADVYRLPYLASSGPGFALLEAARKVNFKDISSRIGAGFSSGSWDK 234 (295)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (295)
+ +....+|+++ .|... ... |.. | .... ...++. .-..
T Consensus 767 ----------Y---DTgYTERYMg--~P~~n----E~g----Y~a----g-SV~~---------~Veklp------depn 803 (867)
T KOG2281|consen 767 ----------Y---DTGYTERYMG--YPDNN----EHG----YGA----G-SVAG---------HVEKLP------DEPN 803 (867)
T ss_pred ----------e---cccchhhhcC--CCccc----hhc----ccc----h-hHHH---------HHhhCC------CCCc
Confidence 0 0011233322 12110 000 100 0 0100 111111 1134
Q ss_pred cEEEEEeCCCCCCCcchHHHHHhcC---CCCeEEEEecCCCCCCC-CCChHHHHHHHHHHHHh
Q 022534 235 PVLVAWGISDKYLPQSVAEEFQKGN---PNVVKLQMIEGAGHMPQ-EDWPEKVVDGLRYFFLN 293 (295)
Q Consensus 235 P~l~i~G~~D~~~~~~~~~~~~~~~---~~~~~~~~i~~~gH~~~-~e~p~~~~~~i~~fl~~ 293 (295)
-.|++||--|.-+.......+...+ .+.-+++++|+-+|++- .|.-.-.-..+..|+.+
T Consensus 804 RLlLvHGliDENVHF~Hts~Lvs~lvkagKpyeL~IfP~ERHsiR~~es~~~yE~rll~FlQ~ 866 (867)
T KOG2281|consen 804 RLLLVHGLIDENVHFAHTSRLVSALVKAGKPYELQIFPNERHSIRNPESGIYYEARLLHFLQE 866 (867)
T ss_pred eEEEEecccccchhhhhHHHHHHHHHhCCCceEEEEccccccccCCCccchhHHHHHHHHHhh
Confidence 5799999999988777665554322 22359999999999984 45555566667777764
|
|
| >PF12715 Abhydrolase_7: Abhydrolase family; PDB: 3NUZ_C 3G8Y_A | Back alignment and domain information |
|---|
Probab=97.77 E-value=0.00012 Score=64.50 Aligned_cols=108 Identities=23% Similarity=0.330 Sum_probs=51.4
Q ss_pred CCCceEEEEcCCCCCCcc--------------c----hhhHHHhhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCCHHHHH
Q 022534 33 SRLGTIVFLHGAPSHSYS--------------Y----RNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFH 94 (295)
Q Consensus 33 ~~~~~vv~lHG~~~~~~~--------------w----~~~~~~l~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~ 94 (295)
.+-|.||++||-+++... | ..+..+|+++||-|+++|.+|+|+............++-..++
T Consensus 113 ~p~PAVL~lHgHg~~Ke~~~g~~gv~~~~~~~~~~~~~~~g~~LAk~GYVvla~D~~g~GER~~~e~~~~~~~~~~~~la 192 (390)
T PF12715_consen 113 GPFPAVLCLHGHGGGKEKMAGEDGVSPDLKDDYDDPKQDYGDQLAKRGYVVLAPDALGFGERGDMEGAAQGSNYDCQALA 192 (390)
T ss_dssp S-EEEEEEE--TT--HHHHCT---SSGCG--STTSTTT-HHHHHHTTTSEEEEE--TTSGGG-SSCCCTTTTS--HHHHH
T ss_pred CCCCEEEEeCCCCCCcccccCCcccccccchhhccccccHHHHHHhCCCEEEEEccccccccccccccccccchhHHHHH
Confidence 345789999997653311 1 2457789999999999999999987654322112222222222
Q ss_pred HHH------------------HHHHHHhCCCCceEEEEecccchHH-HHHHHHhCcCccceeEEEc
Q 022534 95 EEL------------------DKLLDVLEVKYPFFLVVQGFLVGSY-GLTWALKNPSRISKLAILN 141 (295)
Q Consensus 95 ~~l------------------~~~~~~l~~~~~~~lv~~G~~~G~~-~~~~a~~~p~~v~~lil~~ 141 (295)
..+ .++++.+..-.+--+.+.|+|||++ ++.+|+.. ++|+..++.+
T Consensus 193 ~~~l~lG~S~~G~~~~ddmr~lDfL~slpeVD~~RIG~~GfSmGg~~a~~LaALD-dRIka~v~~~ 257 (390)
T PF12715_consen 193 RNLLMLGRSLAGLMAWDDMRALDFLASLPEVDPDRIGCMGFSMGGYRAWWLAALD-DRIKATVANG 257 (390)
T ss_dssp HHHHHTT--HHHHHHHHHHHHHHHHCT-TTEEEEEEEEEEEGGGHHHHHHHHHH--TT--EEEEES
T ss_pred HHHHHcCcCHHHHHHHHHHHHHHHHhcCcccCccceEEEeecccHHHHHHHHHcc-hhhHhHhhhh
Confidence 211 1222222211111233348898875 55666665 4788776653
|
|
| >COG3509 LpqC Poly(3-hydroxybutyrate) depolymerase [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=97.77 E-value=0.00041 Score=58.84 Aligned_cols=130 Identities=16% Similarity=0.147 Sum_probs=73.9
Q ss_pred ccceeeEEeCcEEEEEEEcCCCC--CCCceEEEEcCCCCCCc------cchhhHHHhhhCCCeEEEeCCCCCCC------
Q 022534 10 REYGSYIKSGEYRWFVRETGSAD--SRLGTIVFLHGAPSHSY------SYRNVMSQMSDAGFHCFAPDWLGFGF------ 75 (295)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~g~~~--~~~~~vv~lHG~~~~~~------~w~~~~~~l~~~~~~via~Dl~G~G~------ 75 (295)
..+-..+.++|.+..|.-+-++. ..+|.||+|||-.++.. -|+.+++ ..||-|..||.-..-.
T Consensus 34 ~~~~~s~~~~g~~r~y~l~vP~g~~~~apLvv~LHG~~~sgag~~~~sg~d~lAd---~~gFlV~yPdg~~~~wn~~~~~ 110 (312)
T COG3509 34 GSSVASFDVNGLKRSYRLYVPPGLPSGAPLVVVLHGSGGSGAGQLHGTGWDALAD---REGFLVAYPDGYDRAWNANGCG 110 (312)
T ss_pred cCCccccccCCCccceEEEcCCCCCCCCCEEEEEecCCCChHHhhcccchhhhhc---ccCcEEECcCccccccCCCccc
Confidence 34444556666555555543322 22468999999876543 4555544 3489999996432221
Q ss_pred -CCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCceEEEEecccch-HHHHHHHHhCcCccceeEEEcCCC
Q 022534 76 -SDKPEKGYDDFDFTENEFHEELDKLLDVLEVKYPFFLVVQGFLVG-SYGLTWALKNPSRISKLAILNSPL 144 (295)
Q Consensus 76 -S~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~~lv~~G~~~G-~~~~~~a~~~p~~v~~lil~~~p~ 144 (295)
+-.+.....+.+ ....+.+.++.++.+.+++.. .+.+.|.|.| .++..++..+|+.+.++.++++..
T Consensus 111 ~~~~p~~~~~g~d-dVgflr~lva~l~~~~gidp~-RVyvtGlS~GG~Ma~~lac~~p~~faa~A~VAg~~ 179 (312)
T COG3509 111 NWFGPADRRRGVD-DVGFLRALVAKLVNEYGIDPA-RVYVTGLSNGGRMANRLACEYPDIFAAIAPVAGLL 179 (312)
T ss_pred ccCCcccccCCcc-HHHHHHHHHHHHHHhcCcCcc-eEEEEeeCcHHHHHHHHHhcCcccccceeeeeccc
Confidence 111111000111 123345555666666677632 2333477765 578888999999999998886544
|
|
| >KOG2112 consensus Lysophospholipase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.75 E-value=0.0014 Score=52.92 Aligned_cols=180 Identities=21% Similarity=0.283 Sum_probs=99.9
Q ss_pred ceEEEEcCCCCCCccchhhHHHhhhCCCeEEEeCCCCCCCCC-----------CCCCCCC--CCCCCHHHHHHHHHHHHH
Q 022534 36 GTIVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGFGFSD-----------KPEKGYD--DFDFTENEFHEELDKLLD 102 (295)
Q Consensus 36 ~~vv~lHG~~~~~~~w~~~~~~l~~~~~~via~Dl~G~G~S~-----------~~~~~~~--~~~~~~~~~~~~l~~~~~ 102 (295)
.+||++||.+++...|..+++.|.-.+-+.|.|--|=.=-|. ...-..+ ...-.+..-++.+..+++
T Consensus 4 atIi~LHglGDsg~~~~~~~~~l~l~NiKwIcP~aP~rpvt~~~G~~~~aWfd~~~~~~~~~~d~~~~~~aa~~i~~Li~ 83 (206)
T KOG2112|consen 4 ATIIFLHGLGDSGSGWAQFLKQLPLPNIKWICPTAPSRPVTLNGGAFMNAWFDIMELSSDAPEDEEGLHRAADNIANLID 83 (206)
T ss_pred EEEEEEecCCCCCccHHHHHHcCCCCCeeEEcCCCCCCcccccCCCcccceecceeeCcccchhhhHHHHHHHHHHHHHH
Confidence 489999999999999988888877556777777443211111 0000000 000022334566666666
Q ss_pred Hh---CCCCceEEEEecccch-HHHHHHHHhCcCccceeEEEcCCCCCCCCCchhhhhhhcccchhhhhhhHHHHHHHHH
Q 022534 103 VL---EVKYPFFLVVQGFLVG-SYGLTWALKNPSRISKLAILNSPLTASSPLPGLFQQLRIPLLGEFTAQNAIMAERFIE 178 (295)
Q Consensus 103 ~l---~~~~~~~lv~~G~~~G-~~~~~~a~~~p~~v~~lil~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (295)
.- +++..-+++ +|.+.| +.++..+..+|..+.+..-.+ +... +..
T Consensus 84 ~e~~~Gi~~~rI~i-gGfs~G~a~aL~~~~~~~~~l~G~~~~s-~~~p---------~~~-------------------- 132 (206)
T KOG2112|consen 84 NEPANGIPSNRIGI-GGFSQGGALALYSALTYPKALGGIFALS-GFLP---------RAS-------------------- 132 (206)
T ss_pred HHHHcCCCccceeE-cccCchHHHHHHHHhccccccceeeccc-cccc---------cch--------------------
Confidence 42 443222333 356655 567777778877666554332 1110 000
Q ss_pred hCCCccccccccccccccccccCCchhHHHHHHHhcchhhhhHhhhcCcCCCCCCCcEEEEEeCCCCCCCcchHHH---H
Q 022534 179 AGSPYVLKLDKADVYRLPYLASSGPGFALLEAARKVNFKDISSRIGAGFSSGSWDKPVLVAWGISDKYLPQSVAEE---F 255 (295)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~~~~~~~~---~ 255 (295)
...+. .+ .. .. ..|++..||+.|+++|....+. +
T Consensus 133 ~~~~~-----------~~--------------------~~-----------~~-~~~i~~~Hg~~d~~vp~~~g~~s~~~ 169 (206)
T KOG2112|consen 133 IGLPG-----------WL--------------------PG-----------VN-YTPILLCHGTADPLVPFRFGEKSAQF 169 (206)
T ss_pred hhccC-----------Cc--------------------cc-----------cC-cchhheecccCCceeehHHHHHHHHH
Confidence 00000 00 00 01 4889999999999998765433 3
Q ss_pred HhcCCCCeEEEEecCCCCCCCCCChHHHHHHHHHHHHh
Q 022534 256 QKGNPNVVKLQMIEGAGHMPQEDWPEKVVDGLRYFFLN 293 (295)
Q Consensus 256 ~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 293 (295)
.+.....++++.+++.+|.. -|+++ +.+..|+.+
T Consensus 170 l~~~~~~~~f~~y~g~~h~~---~~~e~-~~~~~~~~~ 203 (206)
T KOG2112|consen 170 LKSLGVRVTFKPYPGLGHST---SPQEL-DDLKSWIKT 203 (206)
T ss_pred HHHcCCceeeeecCCccccc---cHHHH-HHHHHHHHH
Confidence 33333348999999999985 34444 556666654
|
|
| >PF08840 BAAT_C: BAAT / Acyl-CoA thioester hydrolase C terminal; InterPro: IPR014940 Acyl-CoA thioesterases are a group of enzymes that catalyse the hydrolysis of acyl-CoAs to the free fatty acid and coenzyme A (CoASH), providing the potential to regulate intracellular levels of acyl-CoAs, free fatty acids and CoASH | Back alignment and domain information |
|---|
Probab=97.70 E-value=0.00014 Score=60.17 Aligned_cols=45 Identities=31% Similarity=0.464 Sum_probs=25.5
Q ss_pred CCCCcEEEEEeCCCCCCCcch-HHH----HHhc-CCCCeEEEEecCCCCCC
Q 022534 231 SWDKPVLVAWGISDKYLPQSV-AEE----FQKG-NPNVVKLQMIEGAGHMP 275 (295)
Q Consensus 231 ~~~~P~l~i~G~~D~~~~~~~-~~~----~~~~-~~~~~~~~~i~~~gH~~ 275 (295)
++++|+|+|.|++|...|... ++. +.+. .+...+++.+|++||+.
T Consensus 113 ~i~~piLli~g~dD~~WpS~~~a~~i~~rL~~~~~~~~~~~l~Y~~aGH~i 163 (213)
T PF08840_consen 113 KIKGPILLISGEDDQIWPSSEMAEQIEERLKAAGFPHNVEHLSYPGAGHLI 163 (213)
T ss_dssp G--SEEEEEEETT-SSS-HHHHHHHHHHHHHCTT-----EEEEETTB-S--
T ss_pred HcCCCEEEEEeCCCCccchHHHHHHHHHHHHHhCCCCcceEEEcCCCCcee
Confidence 678999999999999987543 333 3322 23246889999999974
|
Bile acid-CoA:amino acid N-acetyltransferase (BAAT) is involved in bile acid metabolism and may also act as an acyl-CoA thioesterase that regulates intracellular levels of free fatty acids []. This entry represents a catalytic domain is found at the C terminus of acyl-CoA thioester hydrolases and bile acid-CoA:amino acid N-acetyltransferases. ; PDB: 3K2I_B 3HLK_B. |
| >PF05990 DUF900: Alpha/beta hydrolase of unknown function (DUF900); InterPro: IPR010297 This domain is associated with proteins of unknown function, which are hydrolase-like | Back alignment and domain information |
|---|
Probab=97.62 E-value=0.00014 Score=61.06 Aligned_cols=104 Identities=18% Similarity=0.200 Sum_probs=54.7
Q ss_pred CceEEEEcCCCCCCccchhhHHHhh-hCCC--eEEEeCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCceE
Q 022534 35 LGTIVFLHGAPSHSYSYRNVMSQMS-DAGF--HCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEELDKLLDVLEVKYPFF 111 (295)
Q Consensus 35 ~~~vv~lHG~~~~~~~w~~~~~~l~-~~~~--~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~~ 111 (295)
+..+||+||+..+...-..-+..+. ..+| .++.++||..|.-..-..+.....++-+.+++.|..+.+..+.+ .++
T Consensus 18 ~~vlvfVHGyn~~f~~a~~r~aql~~~~~~~~~~i~FsWPS~g~~~~Y~~d~~~a~~s~~~l~~~L~~L~~~~~~~-~I~ 96 (233)
T PF05990_consen 18 KEVLVFVHGYNNSFEDALRRAAQLAHDLGFPGVVILFSWPSDGSLLGYFYDRESARFSGPALARFLRDLARAPGIK-RIH 96 (233)
T ss_pred CeEEEEEeCCCCCHHHHHHHHHHHHHHhCCCceEEEEEcCCCCChhhhhhhhhhHHHHHHHHHHHHHHHHhccCCc-eEE
Confidence 5699999999877554332233332 1233 79999999888632211011111222233333343333333334 467
Q ss_pred EEEecccchHHHHHHHH-----hCc-----CccceeEEEc
Q 022534 112 LVVQGFLVGSYGLTWAL-----KNP-----SRISKLAILN 141 (295)
Q Consensus 112 lv~~G~~~G~~~~~~a~-----~~p-----~~v~~lil~~ 141 (295)
++ +||||+..+.-|+ ..+ .++..+++++
T Consensus 97 il--aHSMG~rv~~~aL~~l~~~~~~~~~~~~~~~viL~A 134 (233)
T PF05990_consen 97 IL--AHSMGNRVLLEALRQLASEGERPDVKARFDNVILAA 134 (233)
T ss_pred EE--EeCchHHHHHHHHHHHHhcccchhhHhhhheEEEEC
Confidence 77 6789875433222 222 3677787774
|
|
| >PF05057 DUF676: Putative serine esterase (DUF676); InterPro: IPR007751 This domain, whose function is unknown, is found within a group of putative lipases | Back alignment and domain information |
|---|
Probab=97.49 E-value=0.00017 Score=59.85 Aligned_cols=88 Identities=19% Similarity=0.292 Sum_probs=44.6
Q ss_pred eEEEEcCCCCCCccchhhHHHhhh--CCCeEEEeCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCC-CceEEE
Q 022534 37 TIVFLHGAPSHSYSYRNVMSQMSD--AGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEELDKLLDVLEVK-YPFFLV 113 (295)
Q Consensus 37 ~vv~lHG~~~~~~~w~~~~~~l~~--~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~-~~~~lv 113 (295)
.|||+||+.++...|..+.+.|.. .++.--.+...++-..... ..++.+...+.+++.|.+.++....+ .++.+|
T Consensus 6 LvV~vHGL~G~~~d~~~~~~~l~~~~~~~~~~~i~~~~~~~n~~~--T~~gI~~~g~rL~~eI~~~~~~~~~~~~~IsfI 83 (217)
T PF05057_consen 6 LVVFVHGLWGNPADMRYLKNHLEKIPEDLPNARIVVLGYSNNEFK--TFDGIDVCGERLAEEILEHIKDYESKIRKISFI 83 (217)
T ss_pred EEEEeCCCCCCHHHHHHHHHHHHHhhhhcchhhhhhhcccccccc--cchhhHHHHHHHHHHHHHhccccccccccceEE
Confidence 799999999999999888777764 1222112222222211111 11111111223444444444444333 356777
Q ss_pred EecccchHHHHHHHH
Q 022534 114 VQGFLVGSYGLTWAL 128 (295)
Q Consensus 114 ~~G~~~G~~~~~~a~ 128 (295)
|||+|++.+.+|+
T Consensus 84 --gHSLGGli~r~al 96 (217)
T PF05057_consen 84 --GHSLGGLIARYAL 96 (217)
T ss_pred --EecccHHHHHHHH
Confidence 7777765444443
|
|
| >PF00151 Lipase: Lipase; InterPro: IPR013818 Triglyceride lipases (3 | Back alignment and domain information |
|---|
Probab=97.46 E-value=5.7e-05 Score=66.58 Aligned_cols=102 Identities=17% Similarity=0.272 Sum_probs=51.6
Q ss_pred CCceEEEEcCCCCCC--ccch-hhHHH-hhh--CCCeEEEeCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh---
Q 022534 34 RLGTIVFLHGAPSHS--YSYR-NVMSQ-MSD--AGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEELDKLLDVL--- 104 (295)
Q Consensus 34 ~~~~vv~lHG~~~~~--~~w~-~~~~~-l~~--~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~l~~~~~~l--- 104 (295)
.+|++|++|||.++. ..|. .+.+. |.. .++.||++|+...- .. .|.............|..+++.|
T Consensus 70 ~~pt~iiiHGw~~~~~~~~~~~~~~~all~~~~~d~NVI~VDWs~~a--~~---~Y~~a~~n~~~vg~~la~~l~~L~~~ 144 (331)
T PF00151_consen 70 SKPTVIIIHGWTGSGSSESWIQDMIKALLQKDTGDYNVIVVDWSRGA--SN---NYPQAVANTRLVGRQLAKFLSFLINN 144 (331)
T ss_dssp TSEEEEEE--TT-TT-TTTHHHHHHHHHHCC--S-EEEEEEE-HHHH--SS----HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCeEEEEcCcCCcccchhHHHHHHHHHHhhccCCceEEEEcchhhc--cc---cccchhhhHHHHHHHHHHHHHHHHhh
Confidence 478999999998766 4565 34443 444 47999999996321 11 11000001122334444444433
Q ss_pred -CCC-CceEEEEecccchH-HHHHHHHhCcC--ccceeEEEcC
Q 022534 105 -EVK-YPFFLVVQGFLVGS-YGLTWALKNPS--RISKLAILNS 142 (295)
Q Consensus 105 -~~~-~~~~lv~~G~~~G~-~~~~~a~~~p~--~v~~lil~~~ 142 (295)
+++ ..++|| |||.|+ ++...+..... +|.+++-+++
T Consensus 145 ~g~~~~~ihlI--GhSLGAHvaG~aG~~~~~~~ki~rItgLDP 185 (331)
T PF00151_consen 145 FGVPPENIHLI--GHSLGAHVAGFAGKYLKGGGKIGRITGLDP 185 (331)
T ss_dssp H---GGGEEEE--EETCHHHHHHHHHHHTTT---SSEEEEES-
T ss_pred cCCChhHEEEE--eeccchhhhhhhhhhccCcceeeEEEecCc
Confidence 332 347887 677765 55444444444 8999998874
|
1.1.3 from EC) are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. At least three tissue-specific isozymes exist in higher vertebrates, pancreatic, hepatic and gastric/lingual. These lipases are closely related to each other and to lipoprotein lipase (3.1.1.34 from EC), which hydrolyses triglycerides of chylomicrons and very low density lipoproteins (VLDL) []. The most conserved region in all these proteins is centred around a serine residue which has been shown [] to participate, with an histidine and an aspartic acid residue, in a charge relay system. Such a region is also present in lipases of prokaryotic origin and in lecithin-cholesterol acyltransferase (2.3.1.43 from EC) (LCAT) [], which catalyzes fatty acid transfer between phosphatidylcholine and cholesterol.; PDB: 1LPB_B 1LPA_B 1N8S_A 1GPL_A 1W52_X 2PVS_B 2OXE_B 1BU8_A 2PPL_A 1ETH_A .... |
| >KOG3975 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=97.46 E-value=0.02 Score=47.63 Aligned_cols=245 Identities=11% Similarity=0.176 Sum_probs=123.6
Q ss_pred CCceEEEEcCCCCCCccchhhHHHhhh---CCCeEEEeCCCCCCCCC---CCCCCC-CCCCCCHHHHHHHHHHHHHHhCC
Q 022534 34 RLGTIVFLHGAPSHSYSYRNVMSQMSD---AGFHCFAPDWLGFGFSD---KPEKGY-DDFDFTENEFHEELDKLLDVLEV 106 (295)
Q Consensus 34 ~~~~vv~lHG~~~~~~~w~~~~~~l~~---~~~~via~Dl~G~G~S~---~~~~~~-~~~~~~~~~~~~~l~~~~~~l~~ 106 (295)
.++.++++-|.|+...-|.+++..|-. +.+.++.+...||-.-- +-.... ....|+++++++.=.+|++..-.
T Consensus 28 ~~~li~~IpGNPG~~gFY~~F~~~L~~~l~~r~~~wtIsh~~H~~~P~sl~~~~s~~~~eifsL~~QV~HKlaFik~~~P 107 (301)
T KOG3975|consen 28 DKPLIVWIPGNPGLLGFYTEFARHLHLNLIDRLPVWTISHAGHALMPASLREDHSHTNEEIFSLQDQVDHKLAFIKEYVP 107 (301)
T ss_pred CceEEEEecCCCCchhHHHHHHHHHHHhcccccceeEEeccccccCCcccccccccccccccchhhHHHHHHHHHHHhCC
Confidence 367888999999999999988877642 13679999988887432 111111 12356888999888888887533
Q ss_pred -CCceEEEEecccchHH-HHHHHH-hCcC-ccceeEEEcCCCC-CCCCCchh--hhhhh--cc----cch----hhhh-h
Q 022534 107 -KYPFFLVVQGFLVGSY-GLTWAL-KNPS-RISKLAILNSPLT-ASSPLPGL--FQQLR--IP----LLG----EFTA-Q 168 (295)
Q Consensus 107 -~~~~~lv~~G~~~G~~-~~~~a~-~~p~-~v~~lil~~~p~~-~~~~~~~~--~~~~~--~~----~~~----~~~~-~ 168 (295)
+..++++ |||.|++ .+.+.. ..++ +|.+.+++= |.. .....|.. +.... .+ +.. .+.. .
T Consensus 108 k~~ki~ii--GHSiGaYm~Lqil~~~k~~~~vqKa~~LF-PTIerM~eSpnG~~~t~~l~~~~hv~~lt~yi~~~~lp~~ 184 (301)
T KOG3975|consen 108 KDRKIYII--GHSIGAYMVLQILPSIKLVFSVQKAVLLF-PTIERMHESPNGIRLTKVLRYLPHVVSLTSYIYWILLPGF 184 (301)
T ss_pred CCCEEEEE--ecchhHHHHHHHhhhcccccceEEEEEec-chHHHHhcCCCceEeeeeeeeehhhhheeeeeeeecChHH
Confidence 3456666 7888886 334433 2222 455555542 221 11111110 00000 00 000 0000 0
Q ss_pred hHHHHHHHHHhCCCccccccccccccccccccCCchhHHHHHHHhcchhhhhHhhhcCcC--CCCCCCcEEEEEeCCCCC
Q 022534 169 NAIMAERFIEAGSPYVLKLDKADVYRLPYLASSGPGFALLEAARKVNFKDISSRIGAGFS--SGSWDKPVLVAWGISDKY 246 (295)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~P~l~i~G~~D~~ 246 (295)
...+..++.-.... ...+....+..- ..+ ......... ..+...++..... -.+-.+-+-+.+|..|++
T Consensus 185 ir~~Li~~~l~~~n-----~p~e~l~tal~l-~h~--~v~rn~v~l-a~qEm~eV~~~d~e~~een~d~l~Fyygt~DgW 255 (301)
T KOG3975|consen 185 IRFILIKFMLCGSN-----GPQEFLSTALFL-THP--QVVRNSVGL-AAQEMEEVTTRDIEYCEENLDSLWFYYGTNDGW 255 (301)
T ss_pred HHHHHHHHhcccCC-----CcHHHHhhHHHh-hcH--HHHHHHhhh-chHHHHHHHHhHHHHHHhcCcEEEEEccCCCCC
Confidence 00011111100000 000000000000 000 000000000 0011111100000 002257888999999999
Q ss_pred CCcchHHHHHhcCCC-CeEEEEecCCCCCCCCCChHHHHHHHHHHH
Q 022534 247 LPQSVAEEFQKGNPN-VVKLQMIEGAGHMPQEDWPEKVVDGLRYFF 291 (295)
Q Consensus 247 ~~~~~~~~~~~~~~~-~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl 291 (295)
+|.+....+++..|. +.++-. +++-|...+...+..+.++.+.+
T Consensus 256 ~p~~~~d~~kdd~~eed~~Lde-dki~HAFV~~~~q~ma~~v~d~~ 300 (301)
T KOG3975|consen 256 VPSHYYDYYKDDVPEEDLKLDE-DKIPHAFVVKHAQYMANAVFDMI 300 (301)
T ss_pred cchHHHHHHhhhcchhceeecc-ccCCcceeecccHHHHHHHHHhh
Confidence 999999999999986 345555 89999988888888888877765
|
|
| >PF06441 EHN: Epoxide hydrolase N terminus; InterPro: IPR010497 This entry represents the N-terminal region of the eukaryotic epoxide hydrolase protein | Back alignment and domain information |
|---|
Probab=97.38 E-value=0.00036 Score=51.21 Aligned_cols=45 Identities=13% Similarity=0.081 Sum_probs=27.7
Q ss_pred cceeeEEeCcEEEEEEEcCCCCCCCceEEEEcCCCCCCccchhhH
Q 022534 11 EYGSYIKSGEYRWFVRETGSADSRLGTIVFLHGAPSHSYSYRNVM 55 (295)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~g~~~~~~~~vv~lHG~~~~~~~w~~~~ 55 (295)
.--+.++++|+.+|+.......+...||||+|||++|-.+|..++
T Consensus 68 ~phf~t~I~g~~iHFih~rs~~~~aiPLll~HGWPgSf~Ef~~vI 112 (112)
T PF06441_consen 68 FPHFKTEIDGLDIHFIHVRSKRPNAIPLLLLHGWPGSFLEFLKVI 112 (112)
T ss_dssp S-EEEEEETTEEEEEEEE--S-TT-EEEEEE--SS--GGGGHHHH
T ss_pred CCCeeEEEeeEEEEEEEeeCCCCCCeEEEEECCCCccHHhHHhhC
Confidence 334556778999999666544445679999999999999887654
|
Epoxide hydrolases (3.3.2.3 from EC) comprise a group of functionally related enzymes that catalyse the addition of water to oxirane compounds (epoxides), thereby usually generating vicinal trans-diols. EHs have been found in all types of living organisms, including mammals, invertebrates, plants, fungi and bacteria. In animals, the major interest in EH is directed towards their detoxification capacity for epoxides since they are important safeguards against the cytotoxic and genotoxic potential of oxirane derivatives that are often reactive electrophiles because of the high tension of the three-membered ring system and the strong polarisation of the C--O bonds. This is of significant relevance because epoxides are frequent intermediary metabolites, which arise during the biotransformation of foreign compounds []. This domain is often found in conjunction with IPR000073 from INTERPRO.; GO: 0004301 epoxide hydrolase activity, 0009636 response to toxin, 0016020 membrane; PDB: 3G0I_B 3G02_A 1QO7_A. |
| >COG1073 Hydrolases of the alpha/beta superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.36 E-value=0.01 Score=50.88 Aligned_cols=60 Identities=30% Similarity=0.494 Sum_probs=49.1
Q ss_pred CcEEEEEeCCCCCCCcchHHHHHhcCCC-CeEEEEecCCCCCCCCCC-hH--HHHHHHHHHHHh
Q 022534 234 KPVLVAWGISDKYLPQSVAEEFQKGNPN-VVKLQMIEGAGHMPQEDW-PE--KVVDGLRYFFLN 293 (295)
Q Consensus 234 ~P~l~i~G~~D~~~~~~~~~~~~~~~~~-~~~~~~i~~~gH~~~~e~-p~--~~~~~i~~fl~~ 293 (295)
+|+|+++|.+|.+++...+..+.+.... ..+..++++++|...-.. +. +....+..|+.+
T Consensus 233 ~P~l~~~G~~D~~vp~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~f~~~ 296 (299)
T COG1073 233 RPVLLVHGERDEVVPLRDAEDLYEAARERPKKLLFVPGGGHIDLYDNPPAVEQALDKLAEFLER 296 (299)
T ss_pred cceEEEecCCCcccchhhhHHHHhhhccCCceEEEecCCccccccCccHHHHHHHHHHHHHHHH
Confidence 8999999999999999998888776665 468899999999876544 42 677888888875
|
|
| >PRK04940 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=97.31 E-value=0.052 Score=43.31 Aligned_cols=51 Identities=16% Similarity=0.054 Sum_probs=36.9
Q ss_pred EEEEEeCCCCCCCcchHHHHHhcCCCCe-EEEEecCCCCCCCCCChHHHHHHHHHHHH
Q 022534 236 VLVAWGISDKYLPQSVAEEFQKGNPNVV-KLQMIEGAGHMPQEDWPEKVVDGLRYFFL 292 (295)
Q Consensus 236 ~l~i~G~~D~~~~~~~~~~~~~~~~~~~-~~~~i~~~gH~~~~e~p~~~~~~i~~fl~ 292 (295)
.+++..+.|.+.+...+....+ . + +..+.+|..|-. +.-++....|.+|+.
T Consensus 127 ~~vllq~gDEvLDyr~a~~~y~---~-~y~~~v~~GGdH~f--~~fe~~l~~I~~F~~ 178 (180)
T PRK04940 127 CLVILSRNDEVLDSQRTAEELH---P-YYEIVWDEEQTHKF--KNISPHLQRIKAFKT 178 (180)
T ss_pred EEEEEeCCCcccCHHHHHHHhc---c-CceEEEECCCCCCC--CCHHHHHHHHHHHHh
Confidence 4889999999998876655543 2 4 688899988865 444556677777763
|
|
| >COG4814 Uncharacterized protein with an alpha/beta hydrolase fold [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.25 E-value=0.031 Score=46.61 Aligned_cols=105 Identities=22% Similarity=0.322 Sum_probs=63.5
Q ss_pred ceEEEEcCCCCCCccchhhHHHhhhCCC------eEEEeCCCCCCCC----CC--CCCC----CCCCCCCHHHHHHHHHH
Q 022534 36 GTIVFLHGAPSHSYSYRNVMSQMSDAGF------HCFAPDWLGFGFS----DK--PEKG----YDDFDFTENEFHEELDK 99 (295)
Q Consensus 36 ~~vv~lHG~~~~~~~w~~~~~~l~~~~~------~via~Dl~G~G~S----~~--~~~~----~~~~~~~~~~~~~~l~~ 99 (295)
-|.|||||.+++..+...++..|..+ + =++..|--|-=.. ++ ..+- .....-+..++...+..
T Consensus 46 iPTIfIhGsgG~asS~~~Mv~ql~~~-~~~~~e~Lt~~V~~dgslk~tGk~~Kd~~nP~I~~gfe~n~~s~~~~s~wlk~ 124 (288)
T COG4814 46 IPTIFIHGSGGTASSLNGMVNQLLPD-YKAGTESLTMTVDVDGSLKVTGKISKDAKNPIIEFGFEDNTASGLDQSKWLKK 124 (288)
T ss_pred cceEEEecCCCChhHHHHHHHHhhhc-ccccccceEEEEcCCCcEEEeeeecccCCCCeEEEEEecCcCchhhHHHHHHH
Confidence 48899999999999999999998753 4 2455565551111 11 0000 00111234566677766
Q ss_pred HHHHh----CCCCceEEEEecccchHHHH-HHHHh------CcCccceeEEEcCCCC
Q 022534 100 LLDVL----EVKYPFFLVVQGFLVGSYGL-TWALK------NPSRISKLAILNSPLT 145 (295)
Q Consensus 100 ~~~~l----~~~~~~~lv~~G~~~G~~~~-~~a~~------~p~~v~~lil~~~p~~ 145 (295)
++..| ++++ +-+| |||+|+.|+ .++.. +| .++.++.+++|+.
T Consensus 125 ~msyL~~~Y~i~k-~n~V--GhSmGg~~~~~Y~~~yg~dks~P-~lnK~V~l~gpfN 177 (288)
T COG4814 125 AMSYLQKHYNIPK-FNAV--GHSMGGLGLTYYMIDYGDDKSLP-PLNKLVSLAGPFN 177 (288)
T ss_pred HHHHHHHhcCCce-eeee--eeccccHHHHHHHHHhcCCCCCc-chhheEEeccccc
Confidence 66655 5664 4455 888876554 34443 55 4788998887775
|
|
| >PF05705 DUF829: Eukaryotic protein of unknown function (DUF829); InterPro: IPR008547 This signature identifies Transmembrane protein 53, that have no known function but are predicted to be integral membrane proteins | Back alignment and domain information |
|---|
Probab=97.16 E-value=0.059 Score=45.30 Aligned_cols=61 Identities=18% Similarity=0.262 Sum_probs=49.7
Q ss_pred CCCCcEEEEEeCCCCCCCcchHHHHHh---cCCCCeEEEEecCCCCCCCC-CChHHHHHHHHHHH
Q 022534 231 SWDKPVLVAWGISDKYLPQSVAEEFQK---GNPNVVKLQMIEGAGHMPQE-DWPEKVVDGLRYFF 291 (295)
Q Consensus 231 ~~~~P~l~i~G~~D~~~~~~~~~~~~~---~~~~~~~~~~i~~~gH~~~~-e~p~~~~~~i~~fl 291 (295)
...+|.|+|+++.|.+++.+..+++.+ ..+.+++...++++.|..|+ ++|++-.+++.+|+
T Consensus 176 ~~~~p~lylYS~~D~l~~~~~ve~~~~~~~~~G~~V~~~~f~~S~HV~H~r~~p~~Y~~~v~~fw 240 (240)
T PF05705_consen 176 PSRCPRLYLYSKADPLIPWRDVEEHAEEARRKGWDVRAEKFEDSPHVAHLRKHPDRYWRAVDEFW 240 (240)
T ss_pred CCCCCeEEecCCCCcCcCHHHHHHHHHHHHHcCCeEEEecCCCCchhhhcccCHHHHHHHHHhhC
Confidence 457999999999999999887766643 23335789999999998876 57999999999885
|
|
| >PF05577 Peptidase_S28: Serine carboxypeptidase S28; InterPro: IPR008758 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families | Back alignment and domain information |
|---|
Probab=97.15 E-value=0.0033 Score=57.88 Aligned_cols=92 Identities=15% Similarity=0.246 Sum_probs=55.4
Q ss_pred hHHHhhhC-CCeEEEeCCCCCCCCCCCCC-CCCCCCC-CHHHHHHHHHHHHHHhC------CCCceEEEEecccchHHHH
Q 022534 54 VMSQMSDA-GFHCFAPDWLGFGFSDKPEK-GYDDFDF-TENEFHEELDKLLDVLE------VKYPFFLVVQGFLVGSYGL 124 (295)
Q Consensus 54 ~~~~l~~~-~~~via~Dl~G~G~S~~~~~-~~~~~~~-~~~~~~~~l~~~~~~l~------~~~~~~lv~~G~~~G~~~~ 124 (295)
++-.|+++ |--+|++-+|=||+|..... ..++..| +.+.-..|++.|++.+. -+.|++++|+++ +|++++
T Consensus 50 ~~~~lA~~~~a~~v~lEHRyYG~S~P~~~~s~~nL~yLt~~QALaD~a~F~~~~~~~~~~~~~~pwI~~GgSY-~G~Laa 128 (434)
T PF05577_consen 50 FMWELAKEFGALVVALEHRYYGKSQPFGDLSTENLRYLTSEQALADLAYFIRYVKKKYNTAPNSPWIVFGGSY-GGALAA 128 (434)
T ss_dssp HHHHHHHHHTEEEEEE--TTSTTB-TTGGGGGSTTTC-SHHHHHHHHHHHHHHHHHHTTTGCC--EEEEEETH-HHHHHH
T ss_pred hHHHHHHHcCCcEEEeehhhhcCCCCccccchhhHHhcCHHHHHHHHHHHHHHHHHhhcCCCCCCEEEECCcc-hhHHHH
Confidence 33445432 56899999999999984211 1112233 77777888888888753 123677775543 677777
Q ss_pred HHHHhCcCccceeEEEcCCCCC
Q 022534 125 TWALKNPSRISKLAILNSPLTA 146 (295)
Q Consensus 125 ~~a~~~p~~v~~lil~~~p~~~ 146 (295)
-+-++||+.|.+-+..++|...
T Consensus 129 w~r~kyP~~~~ga~ASSapv~a 150 (434)
T PF05577_consen 129 WFRLKYPHLFDGAWASSAPVQA 150 (434)
T ss_dssp HHHHH-TTT-SEEEEET--CCH
T ss_pred HHHhhCCCeeEEEEeccceeee
Confidence 7778999999998887777653
|
Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S28 (clan SC). The predicted active site residues for members of this family and family S10 occur in the same order in the sequence: S, D, H. These serine proteases include several eukaryotic enzymes such as lysosomal Pro-X carboxypeptidase, dipeptidyl-peptidase II, and thymus-specific serine peptidase [, , , ].; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3N2Z_B 3JYH_A 3N0T_C. |
| >KOG2100 consensus Dipeptidyl aminopeptidase [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=97.14 E-value=0.066 Score=52.70 Aligned_cols=221 Identities=17% Similarity=0.171 Sum_probs=117.8
Q ss_pred EEeCcEEEEEEEcCCCC----CCCceEEEEcCCCCCC-------ccchhhHHHhhhCCCeEEEeCCCCCCCCCCCC--CC
Q 022534 16 IKSGEYRWFVRETGSAD----SRLGTIVFLHGAPSHS-------YSYRNVMSQMSDAGFHCFAPDWLGFGFSDKPE--KG 82 (295)
Q Consensus 16 ~~~~~~~~~~~~~g~~~----~~~~~vv~lHG~~~~~-------~~w~~~~~~l~~~~~~via~Dl~G~G~S~~~~--~~ 82 (295)
+..+|+..++...-++. .+-|.+|.+||.+++. -.|..+ .....|+-|+.+|-||-|.....- ..
T Consensus 503 i~~~~~~~~~~~~lP~~~~~~~kyPllv~~yGGP~sq~v~~~~~~~~~~~--~~s~~g~~v~~vd~RGs~~~G~~~~~~~ 580 (755)
T KOG2100|consen 503 IEIDGITANAILILPPNFDPSKKYPLLVVVYGGPGSQSVTSKFSVDWNEV--VVSSRGFAVLQVDGRGSGGYGWDFRSAL 580 (755)
T ss_pred EEeccEEEEEEEecCCCCCCCCCCCEEEEecCCCCcceeeeeEEecHHHH--hhccCCeEEEEEcCCCcCCcchhHHHHh
Confidence 33478899888775422 2236777799998622 235444 244569999999999998775321 00
Q ss_pred CCCC-CCCHHHHHHHHHHHHHHhCCCC-ceEEEEecccchHH-HHHHHHhCcCcccee-EEEcCCCCCCCCCchhhhhhh
Q 022534 83 YDDF-DFTENEFHEELDKLLDVLEVKY-PFFLVVQGFLVGSY-GLTWALKNPSRISKL-AILNSPLTASSPLPGLFQQLR 158 (295)
Q Consensus 83 ~~~~-~~~~~~~~~~l~~~~~~l~~~~-~~~lv~~G~~~G~~-~~~~a~~~p~~v~~l-il~~~p~~~~~~~~~~~~~~~ 158 (295)
+.+. ..-++|....+..+++..-++. .+.+ .|||-|++ .+..+...|+++.+- +.+ +|..... ..
T Consensus 581 ~~~lG~~ev~D~~~~~~~~~~~~~iD~~ri~i--~GwSyGGy~t~~~l~~~~~~~fkcgvav-aPVtd~~-~y------- 649 (755)
T KOG2100|consen 581 PRNLGDVEVKDQIEAVKKVLKLPFIDRSRVAI--WGWSYGGYLTLKLLESDPGDVFKCGVAV-APVTDWL-YY------- 649 (755)
T ss_pred hhhcCCcchHHHHHHHHHHHhcccccHHHeEE--eccChHHHHHHHHhhhCcCceEEEEEEe-cceeeee-ee-------
Confidence 0000 1234566666666666543332 2323 37776665 445556777565555 444 4443210 00
Q ss_pred cccchhhhhhhHHHHHHHHHhCCCccccccccccccccccccCCchhHHHHHHHhcchhhhhHhhhcCcCCCCCCCcE-E
Q 022534 159 IPLLGEFTAQNAIMAERFIEAGSPYVLKLDKADVYRLPYLASSGPGFALLEAARKVNFKDISSRIGAGFSSGSWDKPV-L 237 (295)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~-l 237 (295)
+....++++. .+... ..+ +.. +...... +.++.|. |
T Consensus 650 ----------ds~~terymg--~p~~~----------------~~~---y~e---~~~~~~~---------~~~~~~~~L 686 (755)
T KOG2100|consen 650 ----------DSTYTERYMG--LPSEN----------------DKG---YEE---SSVSSPA---------NNIKTPKLL 686 (755)
T ss_pred ----------cccccHhhcC--CCccc----------------cch---hhh---ccccchh---------hhhccCCEE
Confidence 0001122211 11000 000 000 0001111 1334444 9
Q ss_pred EEEeCCCCCCCcchHHHHHhcC---CCCeEEEEecCCCCCCCCCC-hHHHHHHHHHHHH
Q 022534 238 VAWGISDKYLPQSVAEEFQKGN---PNVVKLQMIEGAGHMPQEDW-PEKVVDGLRYFFL 292 (295)
Q Consensus 238 ~i~G~~D~~~~~~~~~~~~~~~---~~~~~~~~i~~~gH~~~~e~-p~~~~~~i~~fl~ 292 (295)
++||+.|..+..+.+..+.+.+ .-..++.++|+..|..-.-. -..+...+..|+.
T Consensus 687 liHGt~DdnVh~q~s~~~~~aL~~~gv~~~~~vypde~H~is~~~~~~~~~~~~~~~~~ 745 (755)
T KOG2100|consen 687 LIHGTEDDNVHFQQSAILIKALQNAGVPFRLLVYPDENHGISYVEVISHLYEKLDRFLR 745 (755)
T ss_pred EEEcCCcCCcCHHHHHHHHHHHHHCCCceEEEEeCCCCcccccccchHHHHHHHHHHHH
Confidence 9999999999877766665432 12379999999999875433 2445566666665
|
|
| >PF06057 VirJ: Bacterial virulence protein (VirJ); InterPro: IPR010333 This entry contains several bacterial VirJ virulence proteins | Back alignment and domain information |
|---|
Probab=97.10 E-value=0.029 Score=45.00 Aligned_cols=92 Identities=17% Similarity=0.347 Sum_probs=59.8
Q ss_pred eEEEEcCCCCCCccchhhHHHhhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh----CCCCceEE
Q 022534 37 TIVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEELDKLLDVL----EVKYPFFL 112 (295)
Q Consensus 37 ~vv~lHG~~~~~~~w~~~~~~l~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~l~~~~~~l----~~~~~~~l 112 (295)
.+||+=|=++-...=..+++.|+++|+.|+-+|-+=|=+|.+ +.++.+.|+..+++.. +.+ .++|
T Consensus 4 ~~v~~SGDgGw~~~d~~~a~~l~~~G~~VvGvdsl~Yfw~~r----------tP~~~a~Dl~~~i~~y~~~w~~~-~vvL 72 (192)
T PF06057_consen 4 LAVFFSGDGGWRDLDKQIAEALAKQGVPVVGVDSLRYFWSER----------TPEQTAADLARIIRHYRARWGRK-RVVL 72 (192)
T ss_pred EEEEEeCCCCchhhhHHHHHHHHHCCCeEEEechHHHHhhhC----------CHHHHHHHHHHHHHHHHHHhCCc-eEEE
Confidence 456666655544333477788999999999999887766654 3456778888887765 334 4667
Q ss_pred EEecccchHHHHHHHH-h----CcCccceeEEEc
Q 022534 113 VVQGFLVGSYGLTWAL-K----NPSRISKLAILN 141 (295)
Q Consensus 113 v~~G~~~G~~~~~~a~-~----~p~~v~~lil~~ 141 (295)
| |+|-|+=.+-++. + ..++|+.++|++
T Consensus 73 i--GYSFGADvlP~~~nrLp~~~r~~v~~v~Ll~ 104 (192)
T PF06057_consen 73 I--GYSFGADVLPFIYNRLPAALRARVAQVVLLS 104 (192)
T ss_pred E--eecCCchhHHHHHhhCCHHHHhheeEEEEec
Confidence 6 7777752222222 2 234788888884
|
VirJ is thought to be involved in the type IV secretion system. It is thought that the substrate proteins localised to the periplasm may associate with the pilus in a manner that is mediated by VirJ, and suggest a two-step process for type IV secretion in Agrobacterium []. |
| >KOG3253 consensus Predicted alpha/beta hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.00 E-value=0.0096 Score=55.30 Aligned_cols=47 Identities=28% Similarity=0.362 Sum_probs=39.3
Q ss_pred CCCCcEEEEEeCCCCCCCcchHHHHHhcCCCCeEEEEecCCCCCCCC
Q 022534 231 SWDKPVLVAWGISDKYLPQSVAEEFQKGNPNVVKLQMIEGAGHMPQE 277 (295)
Q Consensus 231 ~~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~ 277 (295)
.++.|+|||-|..|.-+.++.-+.+++......++++|.+++|.+-.
T Consensus 302 dmk~PVLFV~Gsnd~mcspn~ME~vreKMqA~~elhVI~~adhsmai 348 (784)
T KOG3253|consen 302 DMKQPVLFVIGSNDHMCSPNSMEEVREKMQAEVELHVIGGADHSMAI 348 (784)
T ss_pred hcCCceEEEecCCcccCCHHHHHHHHHHhhccceEEEecCCCccccC
Confidence 34799999999999999988888887665545799999999997654
|
|
| >PF11339 DUF3141: Protein of unknown function (DUF3141); InterPro: IPR024501 This family of proteins appears to be predominantly expressed in Proteobacteria | Back alignment and domain information |
|---|
Probab=97.00 E-value=0.087 Score=48.53 Aligned_cols=80 Identities=19% Similarity=0.304 Sum_probs=53.7
Q ss_pred hhHHHhhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhC-----CCCceEEEEeccc-chHHHHHH
Q 022534 53 NVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEELDKLLDVLE-----VKYPFFLVVQGFL-VGSYGLTW 126 (295)
Q Consensus 53 ~~~~~l~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~l~~~~~~l~-----~~~~~~lv~~G~~-~G~~~~~~ 126 (295)
.+-..|.+ |+.||.+... .-|.++- ++++.......|++.+. ..+| .++ |.. +|-.++++
T Consensus 92 evG~AL~~-GHPvYFV~F~-----p~P~pgQ-----Tl~DV~~ae~~Fv~~V~~~hp~~~kp-~li--GnCQgGWa~~ml 157 (581)
T PF11339_consen 92 EVGVALRA-GHPVYFVGFF-----PEPEPGQ-----TLEDVMRAEAAFVEEVAERHPDAPKP-NLI--GNCQGGWAAMML 157 (581)
T ss_pred HHHHHHHc-CCCeEEEEec-----CCCCCCC-----cHHHHHHHHHHHHHHHHHhCCCCCCc-eEE--eccHHHHHHHHH
Confidence 45556765 8999988665 2233321 67777777777777652 2344 455 554 44456788
Q ss_pred HHhCcCccceeEEEcCCCCC
Q 022534 127 ALKNPSRISKLAILNSPLTA 146 (295)
Q Consensus 127 a~~~p~~v~~lil~~~p~~~ 146 (295)
|+.+|+.+..+|+.++|...
T Consensus 158 AA~~Pd~~gplvlaGaPlsy 177 (581)
T PF11339_consen 158 AALRPDLVGPLVLAGAPLSY 177 (581)
T ss_pred HhcCcCccCceeecCCCccc
Confidence 99999999999998888653
|
Their function is unknown. |
| >KOG1553 consensus Predicted alpha/beta hydrolase BAT5 [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.75 E-value=0.011 Score=51.43 Aligned_cols=99 Identities=13% Similarity=0.277 Sum_probs=58.0
Q ss_pred CceEEEEcCCCCCCccchhhHHHhhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH-HHHhCCC-CceEE
Q 022534 35 LGTIVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEELDKL-LDVLEVK-YPFFL 112 (295)
Q Consensus 35 ~~~vv~lHG~~~~~~~w~~~~~~l~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~l~~~-~~~l~~~-~~~~l 112 (295)
+.-|||.-|..+--.. .-+...+ +.||.|.-+.+|||+.|....-.. ....-++.+.++ +..++.. +.++|
T Consensus 243 q~LvIC~EGNAGFYEv-G~m~tP~-~lgYsvLGwNhPGFagSTG~P~p~-----n~~nA~DaVvQfAI~~Lgf~~edIil 315 (517)
T KOG1553|consen 243 QDLVICFEGNAGFYEV-GVMNTPA-QLGYSVLGWNHPGFAGSTGLPYPV-----NTLNAADAVVQFAIQVLGFRQEDIIL 315 (517)
T ss_pred ceEEEEecCCccceEe-eeecChH-HhCceeeccCCCCccccCCCCCcc-----cchHHHHHHHHHHHHHcCCCccceEE
Confidence 3467777776542111 0111233 359999999999999998743211 112233334443 5556653 23555
Q ss_pred EEecccchHHHHHHHH-hCcCccceeEEEcCCC
Q 022534 113 VVQGFLVGSYGLTWAL-KNPSRISKLAILNSPL 144 (295)
Q Consensus 113 v~~G~~~G~~~~~~a~-~~p~~v~~lil~~~p~ 144 (295)
. |||.|++...||+ .||| |+++|+- +.+
T Consensus 316 y--gWSIGGF~~~waAs~YPd-VkavvLD-AtF 344 (517)
T KOG1553|consen 316 Y--GWSIGGFPVAWAASNYPD-VKAVVLD-ATF 344 (517)
T ss_pred E--EeecCCchHHHHhhcCCC-ceEEEee-cch
Confidence 5 8988877666655 7997 7888764 444
|
|
| >PF00756 Esterase: Putative esterase; InterPro: IPR000801 This family contains several seemingly unrelated proteins, including human esterase D; mycobacterial antigen 85, which is responsible for the high affinity of mycobacteria to fibronectin; Corynebacterium glutamicum major secreted protein PS1; and hypothetical proteins from Escherichia coli, yeast, mycobacteria and Haemophilus influenzae | Back alignment and domain information |
|---|
Probab=96.68 E-value=0.0044 Score=52.32 Aligned_cols=107 Identities=13% Similarity=0.114 Sum_probs=56.1
Q ss_pred CCCceEEEEcCCCCCCccc--hhhHHHhhhCC----CeEEEeCCCCCCCCCCC---------CCCCCCCCCC-HHHHHHH
Q 022534 33 SRLGTIVFLHGAPSHSYSY--RNVMSQMSDAG----FHCFAPDWLGFGFSDKP---------EKGYDDFDFT-ENEFHEE 96 (295)
Q Consensus 33 ~~~~~vv~lHG~~~~~~~w--~~~~~~l~~~~----~~via~Dl~G~G~S~~~---------~~~~~~~~~~-~~~~~~~ 96 (295)
.+-|+|+++||.......| ...++.+.+.+ .-+|++|..+.+.-... .......... .+.+.++
T Consensus 22 ~~~PvlylldG~~~~~~~~~~~~~~~~~~~~~~~~~~iiV~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~e 101 (251)
T PF00756_consen 22 KPYPVLYLLDGQSGWFRNGNAQEALDRLIAEGKIPPMIIVVIPNGDNSRFYTSWYLPAGSSRRADDSGGGDAYETFLTEE 101 (251)
T ss_dssp TTEEEEEEESHTTHHHHHHHHHHHHHHHHHHHTSEEEEEEEEESSSTSSTTSBTTSSBCTTCBCTSTTTHHHHHHHHHTH
T ss_pred CCCEEEEEccCCccccccchHHHHHHHHHHhCCCCceEEEEEecccccccccccccccccccccccCCCCcccceehhcc
Confidence 3357899999972211122 23333333322 44677777665511110 0000000001 1334566
Q ss_pred HHHHHHH-hCCCCc-eEEEEecccchHH-HHHHHHhCcCccceeEEEc
Q 022534 97 LDKLLDV-LEVKYP-FFLVVQGFLVGSY-GLTWALKNPSRISKLAILN 141 (295)
Q Consensus 97 l~~~~~~-l~~~~~-~~lv~~G~~~G~~-~~~~a~~~p~~v~~lil~~ 141 (295)
|..++++ ...... ..++ |+|+|++ ++.+++++|+.+.+++.++
T Consensus 102 l~p~i~~~~~~~~~~~~i~--G~S~GG~~Al~~~l~~Pd~F~~~~~~S 147 (251)
T PF00756_consen 102 LIPYIEANYRTDPDRRAIA--GHSMGGYGALYLALRHPDLFGAVIAFS 147 (251)
T ss_dssp HHHHHHHHSSEEECCEEEE--EETHHHHHHHHHHHHSTTTESEEEEES
T ss_pred chhHHHHhcccccceeEEe--ccCCCcHHHHHHHHhCccccccccccC
Confidence 6777665 333322 3443 7787765 5667889999999999885
|
; PDB: 3LS2_A 1VA5_B 1DQZ_B 3HRH_A 1DQY_A 2GZR_A 2GZS_A 3GFF_A 1R88_A 3E4D_D .... |
| >COG1075 LipA Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.68 E-value=0.0072 Score=53.64 Aligned_cols=100 Identities=16% Similarity=0.197 Sum_probs=69.7
Q ss_pred ceEEEEcCCCCCCccchhhHHHhhhCCCe---EEEeCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCceEE
Q 022534 36 GTIVFLHGAPSHSYSYRNVMSQMSDAGFH---CFAPDWLGFGFSDKPEKGYDDFDFTENEFHEELDKLLDVLEVKYPFFL 112 (295)
Q Consensus 36 ~~vv~lHG~~~~~~~w~~~~~~l~~~~~~---via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~~l 112 (295)
-|++++||+..+...|..+...+...++. ++++++++-..+.. . .-..+.+.+.|.+++...+.+ ++.|
T Consensus 60 ~pivlVhG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-~------~~~~~ql~~~V~~~l~~~ga~-~v~L 131 (336)
T COG1075 60 EPIVLVHGLGGGYGNFLPLDYRLAILGWLTNGVYAFELSGGDGTYS-L------AVRGEQLFAYVDEVLAKTGAK-KVNL 131 (336)
T ss_pred ceEEEEccCcCCcchhhhhhhhhcchHHHhcccccccccccCCCcc-c------cccHHHHHHHHHHHHhhcCCC-ceEE
Confidence 48999999988888888877777766777 88888886621111 1 113456777888888777765 4677
Q ss_pred EEecccchHH-HHHHHHhCc--CccceeEEEcCCCC
Q 022534 113 VVQGFLVGSY-GLTWALKNP--SRISKLAILNSPLT 145 (295)
Q Consensus 113 v~~G~~~G~~-~~~~a~~~p--~~v~~lil~~~p~~ 145 (295)
+ |||+|+. ...++...+ .+|++++.++.|-.
T Consensus 132 i--gHS~GG~~~ry~~~~~~~~~~V~~~~tl~tp~~ 165 (336)
T COG1075 132 I--GHSMGGLDSRYYLGVLGGANRVASVVTLGTPHH 165 (336)
T ss_pred E--eecccchhhHHHHhhcCccceEEEEEEeccCCC
Confidence 7 6677654 444555666 79999999887654
|
|
| >PF10142 PhoPQ_related: PhoPQ-activated pathogenicity-related protein; InterPro: IPR009199 Proteins in this entry are believed to play a role in virulence/pathogenicity in Salmonella | Back alignment and domain information |
|---|
Probab=96.64 E-value=0.06 Score=48.06 Aligned_cols=60 Identities=20% Similarity=0.307 Sum_probs=51.5
Q ss_pred CCCCcEEEEEeCCCCCCCcchHHHHHhcCCCCeEEEEecCCCCCCCCCChHHHHHHHHHHHHh
Q 022534 231 SWDKPVLVAWGISDKYLPQSVAEEFQKGNPNVVKLQMIEGAGHMPQEDWPEKVVDGLRYFFLN 293 (295)
Q Consensus 231 ~~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 293 (295)
++++|.++|.|..|....+..+..+...++..+.+..+||++|..-. ..+.+.+..|+..
T Consensus 260 rL~~PK~ii~atgDeFf~pD~~~~y~d~L~G~K~lr~vPN~~H~~~~---~~~~~~l~~f~~~ 319 (367)
T PF10142_consen 260 RLTMPKYIINATGDEFFVPDSSNFYYDKLPGEKYLRYVPNAGHSLIG---SDVVQSLRAFYNR 319 (367)
T ss_pred hcCccEEEEecCCCceeccCchHHHHhhCCCCeeEEeCCCCCcccch---HHHHHHHHHHHHH
Confidence 56899999999999999898899999999888899999999998755 5566777777754
|
Salmonella typhi PqaA has been shown to be activated by PhoP/Q two-component regulatory system, which regulates many virulence genes []. It has been also shown to confer resistance to antimicrobial peptides (melittin) []. Members of this family are predicted to belong to the alpha/beta hydrolase domain superfamily. |
| >COG4099 Predicted peptidase [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.60 E-value=0.029 Score=47.88 Aligned_cols=101 Identities=18% Similarity=0.217 Sum_probs=54.4
Q ss_pred ceEEEEcCCCCCCccchhhHHHhhhCCCeEEEeCCCCCC-CCCCCC--CCC---CC-CCCCHHHHHHHHH-HHHHHhCCC
Q 022534 36 GTIVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGFG-FSDKPE--KGY---DD-FDFTENEFHEELD-KLLDVLEVK 107 (295)
Q Consensus 36 ~~vv~lHG~~~~~~~w~~~~~~l~~~~~~via~Dl~G~G-~S~~~~--~~~---~~-~~~~~~~~~~~l~-~~~~~l~~~ 107 (295)
|-+||+||.+.....-+. .+. .|..-++.++|-++ .--.|+ +-. +. .+-......+.+. .+.+..+++
T Consensus 192 PLvlfLHgagq~g~dn~~---~l~-sg~gaiawa~pedqcfVlAPQy~~if~d~e~~t~~~l~~~idli~~vlas~ynID 267 (387)
T COG4099 192 PLVLFLHGAGQGGSDNDK---VLS-SGIGAIAWAGPEDQCFVLAPQYNPIFADSEEKTLLYLIEKIDLILEVLASTYNID 267 (387)
T ss_pred cEEEEEecCCCCCchhhh---hhh-cCccceeeecccCceEEEcccccccccccccccchhHHHHHHHHHHHHhhccCcc
Confidence 789999999876654322 333 25566666666655 111111 000 00 0001122233333 233345665
Q ss_pred Cc-eEEEEecccchHHH-HHHHHhCcCccceeEEEcC
Q 022534 108 YP-FFLVVQGFLVGSYG-LTWALKNPSRISKLAILNS 142 (295)
Q Consensus 108 ~~-~~lv~~G~~~G~~~-~~~a~~~p~~v~~lil~~~ 142 (295)
+. +.++ |.|+|++| +.++.++|+.+.+.++++.
T Consensus 268 ~sRIYvi--GlSrG~~gt~al~~kfPdfFAaa~~iaG 302 (387)
T COG4099 268 RSRIYVI--GLSRGGFGTWALAEKFPDFFAAAVPIAG 302 (387)
T ss_pred cceEEEE--eecCcchhhHHHHHhCchhhheeeeecC
Confidence 32 3333 78888764 5667799999998888753
|
|
| >COG2936 Predicted acyl esterases [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.37 E-value=0.028 Score=52.57 Aligned_cols=124 Identities=13% Similarity=0.033 Sum_probs=71.4
Q ss_pred eeEEe-CcEEEEEEEcCCC-CCCCceEEEEcCCCCCCc---cc--hhhHH---HhhhCCCeEEEeCCCCCCCCCCCCCCC
Q 022534 14 SYIKS-GEYRWFVRETGSA-DSRLGTIVFLHGAPSHSY---SY--RNVMS---QMSDAGFHCFAPDWLGFGFSDKPEKGY 83 (295)
Q Consensus 14 ~~~~~-~~~~~~~~~~g~~-~~~~~~vv~lHG~~~~~~---~w--~~~~~---~l~~~~~~via~Dl~G~G~S~~~~~~~ 83 (295)
..|.. +|++++...+.+. ..+.|+++..+=++=... .+ ....+ .++++||.|+..|.||.|.|+.....+
T Consensus 22 v~V~MRDGvrL~~dIy~Pa~~g~~Pvll~~~~~Py~k~~~~~~~~~~~~p~~~~~aa~GYavV~qDvRG~~~SeG~~~~~ 101 (563)
T COG2936 22 VMVPMRDGVRLAADIYRPAGAGPLPVLLSRTRLPYRKRNGTFGPQLSALPQPAWFAAQGYAVVNQDVRGRGGSEGVFDPE 101 (563)
T ss_pred eeEEecCCeEEEEEEEccCCCCCCceeEEeeccccccccccCcchhhcccccceeecCceEEEEecccccccCCccccee
Confidence 34444 6899998888654 244678888883221111 11 12223 467789999999999999999743221
Q ss_pred CCCCCC-H-HHHHHHHHHHHHHhCC-CCceEEEEecccchHH-HHHHHHhCcCccceeEEEcCCC
Q 022534 84 DDFDFT-E-NEFHEELDKLLDVLEV-KYPFFLVVQGFLVGSY-GLTWALKNPSRISKLAILNSPL 144 (295)
Q Consensus 84 ~~~~~~-~-~~~~~~l~~~~~~l~~-~~~~~lv~~G~~~G~~-~~~~a~~~p~~v~~lil~~~p~ 144 (295)
++ + +|- -|+++++.+.-. +..+-.+ |.|-+++ .+.+|+..|..++.++-..+..
T Consensus 102 ----~~~E~~Dg-~D~I~Wia~QpWsNG~Vgm~--G~SY~g~tq~~~Aa~~pPaLkai~p~~~~~ 159 (563)
T COG2936 102 ----SSREAEDG-YDTIEWLAKQPWSNGNVGML--GLSYLGFTQLAAAALQPPALKAIAPTEGLV 159 (563)
T ss_pred ----ccccccch-hHHHHHHHhCCccCCeeeee--cccHHHHHHHHHHhcCCchheeeccccccc
Confidence 12 1 122 366666666543 3334333 5555444 3445566666677666554433
|
|
| >cd00312 Esterase_lipase Esterases and lipases (includes fungal lipases, cholinesterases, etc | Back alignment and domain information |
|---|
Probab=96.18 E-value=0.034 Score=52.05 Aligned_cols=105 Identities=11% Similarity=0.107 Sum_probs=55.4
Q ss_pred CCCceEEEEcCCC---CCCccchhhHHHhhhC-C-CeEEEeCCC----CCCCCCCCCCCCCCCCCCHHHHHHHHH---HH
Q 022534 33 SRLGTIVFLHGAP---SHSYSYRNVMSQMSDA-G-FHCFAPDWL----GFGFSDKPEKGYDDFDFTENEFHEELD---KL 100 (295)
Q Consensus 33 ~~~~~vv~lHG~~---~~~~~w~~~~~~l~~~-~-~~via~Dl~----G~G~S~~~~~~~~~~~~~~~~~~~~l~---~~ 100 (295)
.+.|+||++||.+ ++...+ ....|+.. + +-|+.++.| ||+.+..... ..++.+.|+...+. +-
T Consensus 93 ~~~pv~v~ihGG~~~~g~~~~~--~~~~~~~~~~~~~vv~~~yRlg~~g~~~~~~~~~---~~n~g~~D~~~al~wv~~~ 167 (493)
T cd00312 93 NSLPVMVWIHGGGFMFGSGSLY--PGDGLAREGDNVIVVSINYRLGVLGFLSTGDIEL---PGNYGLKDQRLALKWVQDN 167 (493)
T ss_pred CCCCEEEEEcCCccccCCCCCC--ChHHHHhcCCCEEEEEecccccccccccCCCCCC---CcchhHHHHHHHHHHHHHH
Confidence 3468999999964 233222 22344433 3 899999999 4544432211 11233455544443 33
Q ss_pred HHHhCCC-CceEEEEecccchHH-HHHHHHh--CcCccceeEEEcCCC
Q 022534 101 LDVLEVK-YPFFLVVQGFLVGSY-GLTWALK--NPSRISKLAILNSPL 144 (295)
Q Consensus 101 ~~~l~~~-~~~~lv~~G~~~G~~-~~~~a~~--~p~~v~~lil~~~p~ 144 (295)
++..+.+ +.+++. |+|.|+. +..++.. .+..++++|+.+.+.
T Consensus 168 i~~fggd~~~v~~~--G~SaG~~~~~~~~~~~~~~~lf~~~i~~sg~~ 213 (493)
T cd00312 168 IAAFGGDPDSVTIF--GESAGGASVSLLLLSPDSKGLFHRAISQSGSA 213 (493)
T ss_pred HHHhCCCcceEEEE--eecHHHHHhhhHhhCcchhHHHHHHhhhcCCc
Confidence 4444543 335665 6666653 3333332 345688888776543
|
) These enzymes act on carboxylic esters (EC: 3.1.1.-). The catalytic apparatus involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.These catalytic residues are responsible for the nucleophilic attack on the carbonyl carbon atom of the ester bond. In contrast with other alpha/beta hydrolase fold family members, p-nitrobenzyl esterase and acetylcholine esterase have a Glu instead of Asp at the active site carboxylate. |
| >KOG2182 consensus Hydrolytic enzymes of the alpha/beta hydrolase fold [Posttranslational modification, protein turnover, chaperones; General function prediction only] | Back alignment and domain information |
|---|
Probab=96.17 E-value=0.049 Score=49.72 Aligned_cols=110 Identities=13% Similarity=0.161 Sum_probs=68.6
Q ss_pred CceEEEEcCCCCCCccch----hhHHHhh-hCCCeEEEeCCCCCCCCCCCCC-CCCCCCC-CHHHHHHHHHHHHHHhCCC
Q 022534 35 LGTIVFLHGAPSHSYSYR----NVMSQMS-DAGFHCFAPDWLGFGFSDKPEK-GYDDFDF-TENEFHEELDKLLDVLEVK 107 (295)
Q Consensus 35 ~~~vv~lHG~~~~~~~w~----~~~~~l~-~~~~~via~Dl~G~G~S~~~~~-~~~~~~~-~~~~~~~~l~~~~~~l~~~ 107 (295)
.|.-|+|-|=+.....|- ..+-.++ +-|-.|+...+|=||.|..-.. ..++..| |......|+++||++++.+
T Consensus 86 gPiFLmIGGEgp~~~~wv~~~~~~~~~~AkkfgA~v~~lEHRFYG~S~P~~~~st~nlk~LSs~QALaDla~fI~~~n~k 165 (514)
T KOG2182|consen 86 GPIFLMIGGEGPESDKWVGNENLTWLQWAKKFGATVFQLEHRFYGQSSPIGDLSTSNLKYLSSLQALADLAEFIKAMNAK 165 (514)
T ss_pred CceEEEEcCCCCCCCCccccCcchHHHHHHHhCCeeEEeeeeccccCCCCCCCcccchhhhhHHHHHHHHHHHHHHHHhh
Confidence 356777777443333341 1122233 2366899999999999964221 1112222 5566778999999987542
Q ss_pred ----C--ceEEEEecccchHHHHHHHHhCcCccceeEEEcCCCC
Q 022534 108 ----Y--PFFLVVQGFLVGSYGLTWALKNPSRISKLAILNSPLT 145 (295)
Q Consensus 108 ----~--~~~lv~~G~~~G~~~~~~a~~~p~~v~~lil~~~p~~ 145 (295)
. |++.+|+++ .|++++-+-.+||+.+.+-+..++|..
T Consensus 166 ~n~~~~~~WitFGgSY-sGsLsAW~R~~yPel~~GsvASSapv~ 208 (514)
T KOG2182|consen 166 FNFSDDSKWITFGGSY-SGSLSAWFREKYPELTVGSVASSAPVL 208 (514)
T ss_pred cCCCCCCCeEEECCCc-hhHHHHHHHHhCchhheeeccccccee
Confidence 2 677764433 467766666799999998887777764
|
|
| >PF04083 Abhydro_lipase: Partial alpha/beta-hydrolase lipase region; InterPro: IPR006693 The alpha/beta hydrolase fold is common to several hydrolytic enzymes of widely differing phylogenetic origin and catalytic function | Back alignment and domain information |
|---|
Probab=95.97 E-value=0.014 Score=37.98 Aligned_cols=36 Identities=11% Similarity=0.194 Sum_probs=19.9
Q ss_pred EeCcEEEEEEEcCC------CCCCCceEEEEcCCCCCCccch
Q 022534 17 KSGEYRWFVRETGS------ADSRLGTIVFLHGAPSHSYSYR 52 (295)
Q Consensus 17 ~~~~~~~~~~~~g~------~~~~~~~vv~lHG~~~~~~~w~ 52 (295)
+-+|+.+...-.-. ....+|||++.||+.+++..|-
T Consensus 19 T~DGYiL~l~RIp~~~~~~~~~~~k~pVll~HGL~~ss~~wv 60 (63)
T PF04083_consen 19 TEDGYILTLHRIPPGKNSSNQNKKKPPVLLQHGLLQSSDDWV 60 (63)
T ss_dssp -TTSEEEEEEEE-SBTTCTTTTTT--EEEEE--TT--GGGGC
T ss_pred eCCCcEEEEEEccCCCCCcccCCCCCcEEEECCcccChHHHH
Confidence 34688887755422 2234789999999999999984
|
The core of each enzyme is similar: an alpha/beta sheet, not barrel, of eight beta-sheets connected by alpha-helices []. This entry represents the N-terminal part of an alpha/beta hydrolase domain found in a number of lipases.; GO: 0006629 lipid metabolic process; PDB: 1K8Q_B 1HLG_B. |
| >PF05677 DUF818: Chlamydia CHLPS protein (DUF818); InterPro: IPR008536 This family of unknown function includes several Chlamydia CHLPS proteins and Legionella SidB proteins | Back alignment and domain information |
|---|
Probab=95.90 E-value=0.16 Score=44.51 Aligned_cols=81 Identities=17% Similarity=0.255 Sum_probs=49.5
Q ss_pred ceEEEEcCCCCCCcc----------chhhHHHhhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh-
Q 022534 36 GTIVFLHGAPSHSYS----------YRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEELDKLLDVL- 104 (295)
Q Consensus 36 ~~vv~lHG~~~~~~~----------w~~~~~~l~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~l~~~~~~l- 104 (295)
--||+.-|.++.-+. |..++. +.+-.|+.+.+||.|.|.++. +.++++.+-.++++.+
T Consensus 138 RWiL~s~GNg~~~E~~~~~~~~~~~~~~~ak---~~~aNvl~fNYpGVg~S~G~~--------s~~dLv~~~~a~v~yL~ 206 (365)
T PF05677_consen 138 RWILVSNGNGECYENRAMLDYKDDWIQRFAK---ELGANVLVFNYPGVGSSTGPP--------SRKDLVKDYQACVRYLR 206 (365)
T ss_pred cEEEEEcCChHHhhhhhhhccccHHHHHHHH---HcCCcEEEECCCccccCCCCC--------CHHHHHHHHHHHHHHHH
Confidence 378888887653322 333333 346799999999999998753 2356666666665554
Q ss_pred ----CCCCceEEEEecccch-HHHHHHHHh
Q 022534 105 ----EVKYPFFLVVQGFLVG-SYGLTWALK 129 (295)
Q Consensus 105 ----~~~~~~~lv~~G~~~G-~~~~~~a~~ 129 (295)
|.+ +--+++.|||.| ++++. |++
T Consensus 207 d~~~G~k-a~~Ii~yG~SLGG~Vqa~-AL~ 234 (365)
T PF05677_consen 207 DEEQGPK-AKNIILYGHSLGGGVQAE-ALK 234 (365)
T ss_pred hcccCCC-hheEEEeeccccHHHHHH-HHH
Confidence 222 334556688765 45443 443
|
|
| >KOG2551 consensus Phospholipase/carboxyhydrolase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=95.78 E-value=0.029 Score=45.83 Aligned_cols=59 Identities=17% Similarity=0.312 Sum_probs=45.7
Q ss_pred CCCCcEEEEEeCCCCCCCcchHHHHHhcCCCCeEEEEecCCCCCCCCCChHHHHHHHHHHHHh
Q 022534 231 SWDKPVLVAWGISDKYLPQSVAEEFQKGNPNVVKLQMIEGAGHMPQEDWPEKVVDGLRYFFLN 293 (295)
Q Consensus 231 ~~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 293 (295)
.+++|+|-|.|+.|.+++.+.+..+++.+++. + ++.=..||+++-.. ...+.|.+|+.+
T Consensus 161 ~i~~PSLHi~G~~D~iv~~~~s~~L~~~~~~a-~-vl~HpggH~VP~~~--~~~~~i~~fi~~ 219 (230)
T KOG2551|consen 161 PLSTPSLHIFGETDTIVPSERSEQLAESFKDA-T-VLEHPGGHIVPNKA--KYKEKIADFIQS 219 (230)
T ss_pred CCCCCeeEEecccceeecchHHHHHHHhcCCC-e-EEecCCCccCCCch--HHHHHHHHHHHH
Confidence 56899999999999999999999999999974 4 44445799876544 455666666654
|
|
| >PRK10439 enterobactin/ferric enterobactin esterase; Provisional | Back alignment and domain information |
|---|
Probab=95.78 E-value=0.11 Score=47.46 Aligned_cols=102 Identities=14% Similarity=0.157 Sum_probs=54.4
Q ss_pred CCceEEEEcCCC--CCCccchhhHHHhhhCC----CeEEEeCCCCCCCCCCCCCCCC-CCCCCHHHHHHHHHHHHHHh-C
Q 022534 34 RLGTIVFLHGAP--SHSYSYRNVMSQMSDAG----FHCFAPDWLGFGFSDKPEKGYD-DFDFTENEFHEELDKLLDVL-E 105 (295)
Q Consensus 34 ~~~~vv~lHG~~--~~~~~w~~~~~~l~~~~----~~via~Dl~G~G~S~~~~~~~~-~~~~~~~~~~~~l~~~~~~l-~ 105 (295)
+.|+|+++||-. .....+ ..++.|.+.| .-++.+|-.. ...+.. .+. +..| .+.++++|.-++++. .
T Consensus 208 ~~PvlyllDG~~w~~~~~~~-~~ld~li~~g~i~P~ivV~id~~~--~~~R~~-el~~~~~f-~~~l~~eLlP~I~~~y~ 282 (411)
T PRK10439 208 ERPLAILLDGQFWAESMPVW-PALDSLTHRGQLPPAVYLLIDAID--TTHRSQ-ELPCNADF-WLAVQQELLPQVRAIAP 282 (411)
T ss_pred CCCEEEEEECHHhhhcCCHH-HHHHHHHHcCCCCceEEEEECCCC--cccccc-cCCchHHH-HHHHHHHHHHHHHHhCC
Confidence 357899999953 222222 3445554444 2367888632 111111 110 1011 233456666666653 2
Q ss_pred C--C-CceEEEEecccchHH-HHHHHHhCcCccceeEEEcC
Q 022534 106 V--K-YPFFLVVQGFLVGSY-GLTWALKNPSRISKLAILNS 142 (295)
Q Consensus 106 ~--~-~~~~lv~~G~~~G~~-~~~~a~~~p~~v~~lil~~~ 142 (295)
. + +...+. |+|+|++ ++..++++|+.+.+++.+++
T Consensus 283 ~~~d~~~~~Ia--G~S~GGl~AL~~al~~Pd~Fg~v~s~Sg 321 (411)
T PRK10439 283 FSDDADRTVVA--GQSFGGLAALYAGLHWPERFGCVLSQSG 321 (411)
T ss_pred CCCCccceEEE--EEChHHHHHHHHHHhCcccccEEEEecc
Confidence 2 1 123343 7777765 55667899999999888753
|
|
| >PF03403 PAF-AH_p_II: Platelet-activating factor acetylhydrolase, isoform II; PDB: 3F98_B 3F97_B 3D59_A 3F96_A 3D5E_B 3F9C_A | Back alignment and domain information |
|---|
Probab=95.62 E-value=0.013 Score=52.86 Aligned_cols=39 Identities=18% Similarity=0.399 Sum_probs=28.3
Q ss_pred CCceEEEEcCCCCCCccchhhHHHhhhCCCeEEEeCCCC
Q 022534 34 RLGTIVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLG 72 (295)
Q Consensus 34 ~~~~vv~lHG~~~~~~~w~~~~~~l~~~~~~via~Dl~G 72 (295)
.-|+|||-||++++-..+..+...||.+||=|+++|+|-
T Consensus 99 ~~PvvIFSHGlgg~R~~yS~~~~eLAS~GyVV~aieHrD 137 (379)
T PF03403_consen 99 KFPVVIFSHGLGGSRTSYSAICGELASHGYVVAAIEHRD 137 (379)
T ss_dssp -EEEEEEE--TT--TTTTHHHHHHHHHTT-EEEEE---S
T ss_pred CCCEEEEeCCCCcchhhHHHHHHHHHhCCeEEEEeccCC
Confidence 358999999999999999999999999999999999993
|
|
| >COG4782 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
Probab=95.53 E-value=0.043 Score=48.18 Aligned_cols=104 Identities=15% Similarity=0.178 Sum_probs=55.1
Q ss_pred CCceEEEEcCCCCCC-ccchhhHHHhh--hCCCeEEEeCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCce
Q 022534 34 RLGTIVFLHGAPSHS-YSYRNVMSQMS--DAGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEELDKLLDVLEVKYPF 110 (295)
Q Consensus 34 ~~~~vv~lHG~~~~~-~~w~~~~~~l~--~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~ 110 (295)
.+..+||+||+.-+- ..=.+.++-.. .....++.+.||--|.--.-.-+.+...|+-+.+.+.|..+......++ +
T Consensus 115 ~k~vlvFvHGfNntf~dav~R~aqI~~d~g~~~~pVvFSWPS~g~l~~Yn~DreS~~~Sr~aLe~~lr~La~~~~~~~-I 193 (377)
T COG4782 115 AKTVLVFVHGFNNTFEDAVYRTAQIVHDSGNDGVPVVFSWPSRGSLLGYNYDRESTNYSRPALERLLRYLATDKPVKR-I 193 (377)
T ss_pred CCeEEEEEcccCCchhHHHHHHHHHHhhcCCCcceEEEEcCCCCeeeecccchhhhhhhHHHHHHHHHHHHhCCCCce-E
Confidence 356899999986422 22222233222 2346789999996664221110111223455555555555555444454 6
Q ss_pred EEEEecccchHHHHHH-----HHh----CcCccceeEEE
Q 022534 111 FLVVQGFLVGSYGLTW-----ALK----NPSRISKLAIL 140 (295)
Q Consensus 111 ~lv~~G~~~G~~~~~~-----a~~----~p~~v~~lil~ 140 (295)
+|+ +||||.+.+.- +.+ -+.+++-+|+.
T Consensus 194 ~il--AHSMGtwl~~e~LrQLai~~~~~l~~ki~nViLA 230 (377)
T COG4782 194 YLL--AHSMGTWLLMEALRQLAIRADRPLPAKIKNVILA 230 (377)
T ss_pred EEE--EecchHHHHHHHHHHHhccCCcchhhhhhheEee
Confidence 676 56899864432 332 23457767665
|
|
| >PF02450 LCAT: Lecithin:cholesterol acyltransferase; InterPro: IPR003386 Lecithin:cholesterol acyltransferase (LACT), also known as phosphatidylcholine-sterol acyltransferase (2 | Back alignment and domain information |
|---|
Probab=95.46 E-value=0.12 Score=46.97 Aligned_cols=113 Identities=16% Similarity=0.304 Sum_probs=64.0
Q ss_pred eEEeCcEEEEEEEcCCCCCCCceEEEEc-CCCCCCccchhhHHHhhhCCCeE-----EE-eCCCCCCCCCCCCCCCCCCC
Q 022534 15 YIKSGEYRWFVRETGSADSRLGTIVFLH-GAPSHSYSYRNVMSQMSDAGFHC-----FA-PDWLGFGFSDKPEKGYDDFD 87 (295)
Q Consensus 15 ~~~~~~~~~~~~~~g~~~~~~~~vv~lH-G~~~~~~~w~~~~~~l~~~~~~v-----ia-~Dl~G~G~S~~~~~~~~~~~ 87 (295)
+-..+|+.+.+..+|... .|-.+- .+......|..+++.|.+.||+. .+ +|+| ....
T Consensus 34 ~~~~~gv~i~~~~~g~~~----~i~~ld~~~~~~~~~~~~li~~L~~~GY~~~~~l~~~pYDWR------~~~~------ 97 (389)
T PF02450_consen 34 YSNDPGVEIRVPGFGGTS----GIEYLDPSFITGYWYFAKLIENLEKLGYDRGKDLFAAPYDWR------LSPA------ 97 (389)
T ss_pred eecCCCceeecCCCCcee----eeeecccccccccchHHHHHHHHHhcCcccCCEEEEEeechh------hchh------
Confidence 333456666665555211 233332 22222237999999998766653 22 5666 1100
Q ss_pred CCHHHHHHHHHHHHHHh---CCCCceEEEEecccchHH-HHHHHHhCc------CccceeEEEcCCCCCC
Q 022534 88 FTENEFHEELDKLLDVL---EVKYPFFLVVQGFLVGSY-GLTWALKNP------SRISKLAILNSPLTAS 147 (295)
Q Consensus 88 ~~~~~~~~~l~~~~~~l---~~~~~~~lv~~G~~~G~~-~~~~a~~~p------~~v~~lil~~~p~~~~ 147 (295)
..+++...+..+++.. + +++++|| |||+|++ +..+....+ ..|+++|.+++|+...
T Consensus 98 -~~~~~~~~lk~~ie~~~~~~-~~kv~li--~HSmGgl~~~~fl~~~~~~~W~~~~i~~~i~i~~p~~Gs 163 (389)
T PF02450_consen 98 -ERDEYFTKLKQLIEEAYKKN-GKKVVLI--AHSMGGLVARYFLQWMPQEEWKDKYIKRFISIGTPFGGS 163 (389)
T ss_pred -hHHHHHHHHHHHHHHHHHhc-CCcEEEE--EeCCCchHHHHHHHhccchhhHHhhhhEEEEeCCCCCCC
Confidence 1235666666666654 3 5678888 6677764 434333332 2599999998887643
|
3.1.43 from EC), is involved in extracellular metabolism of plasma lipoproteins, including cholesterol. It esterifies the free cholesterol transported in plasma lipoproteins, and is activated by apolipoprotein A-I. Defects in LACT cause Norum and Fish eye diseases. This family also includes phospholipid:diacylglycerol acyltransferase (PDAT)(2.3.1.158 from EC), which is involved in triacylglycerol formation by an acyl-CoA independent pathway. The enzyme specifically transfers acyl groups from the sn-2 position of a phospholipid to diacylglycerol, thus forming an sn-1-lysophospholipid [].; GO: 0008374 O-acyltransferase activity, 0006629 lipid metabolic process |
| >PLN02213 sinapoylglucose-malate O-sinapoyltransferase/ carboxypeptidase | Back alignment and domain information |
|---|
Probab=95.45 E-value=0.046 Score=48.18 Aligned_cols=60 Identities=15% Similarity=0.205 Sum_probs=46.7
Q ss_pred CCcEEEEEeCCCCCCCcchHHHHHhcCC------------------------CCeEEEEecCCCCCCCCCChHHHHHHHH
Q 022534 233 DKPVLVAWGISDKYLPQSVAEEFQKGNP------------------------NVVKLQMIEGAGHMPQEDWPEKVVDGLR 288 (295)
Q Consensus 233 ~~P~l~i~G~~D~~~~~~~~~~~~~~~~------------------------~~~~~~~i~~~gH~~~~e~p~~~~~~i~ 288 (295)
.+++|+..|+.|.+|+....+.+.+.+. +..+++.+.+|||+++ ++|+...+.+.
T Consensus 233 ~i~VliY~Gd~D~icn~~g~~~wi~~L~w~~~~~~~~w~~~~~~~G~vk~y~~~ltf~~V~~AGHmV~-~qP~~al~m~~ 311 (319)
T PLN02213 233 GYRSLIYSGDHDIAVPFLATQAWIRSLNYSPIHNWRPWMINNQIAGYTRAYSNKMTFATIKAGGHTAE-YRPNETFIMFQ 311 (319)
T ss_pred CceEEEEECCcCeeCCcHhHHHHHHhcCCCCCCCCccccCCCEeeeEEEEecCcceEEEEcCCCCCCC-cCHHHHHHHHH
Confidence 4899999999998887655544433222 1257788889999996 69999999999
Q ss_pred HHHHh
Q 022534 289 YFFLN 293 (295)
Q Consensus 289 ~fl~~ 293 (295)
+|+..
T Consensus 312 ~fi~~ 316 (319)
T PLN02213 312 RWISG 316 (319)
T ss_pred HHHcC
Confidence 99865
|
|
| >PF12048 DUF3530: Protein of unknown function (DUF3530); InterPro: IPR022529 This family of proteins is functionally uncharacterised | Back alignment and domain information |
|---|
Probab=95.23 E-value=0.43 Score=41.86 Aligned_cols=61 Identities=15% Similarity=0.294 Sum_probs=38.6
Q ss_pred cceeeEEeCcEEEEE--EEcCCCCCCCceEEEEcCCCCCCcc---chhhHHHhhhCCCeEEEeCCCC
Q 022534 11 EYGSYIKSGEYRWFV--RETGSADSRLGTIVFLHGAPSHSYS---YRNVMSQMSDAGFHCFAPDWLG 72 (295)
Q Consensus 11 ~~~~~~~~~~~~~~~--~~~g~~~~~~~~vv~lHG~~~~~~~---w~~~~~~l~~~~~~via~Dl~G 72 (295)
+.=..++.++.++=. .... ....++.||+|||++++... -..+-..|.+.|...+++-+|-
T Consensus 62 ~e~~~L~~~~~~flaL~~~~~-~~~~~G~vIilp~~g~~~d~p~~i~~LR~~L~~~GW~Tlsit~P~ 127 (310)
T PF12048_consen 62 DEVQWLQAGEERFLALWRPAN-SAKPQGAVIILPDWGEHPDWPGLIAPLRRELPDHGWATLSITLPD 127 (310)
T ss_pred hhcEEeecCCEEEEEEEeccc-CCCCceEEEEecCCCCCCCcHhHHHHHHHHhhhcCceEEEecCCC
Confidence 333455556544433 2222 22346799999999887642 2344455777899999998886
|
This protein is found in bacteria. Proteins in this family are typically between 272 to 336 amino acids in length. These proteins are distantly related to alpa/beta hydrolases so they may act as enzymes. |
| >COG2272 PnbA Carboxylesterase type B [Lipid metabolism] | Back alignment and domain information |
|---|
Probab=95.08 E-value=0.18 Score=46.23 Aligned_cols=109 Identities=15% Similarity=0.161 Sum_probs=58.3
Q ss_pred CCCceEEEEcCCC---CCCcc-chhhHHHhhhCC-CeEEEeCCCC--CCCCCCCCC---CCCCCCCCHHHHH---HHHHH
Q 022534 33 SRLGTIVFLHGAP---SHSYS-YRNVMSQMSDAG-FHCFAPDWLG--FGFSDKPEK---GYDDFDFTENEFH---EELDK 99 (295)
Q Consensus 33 ~~~~~vv~lHG~~---~~~~~-w~~~~~~l~~~~-~~via~Dl~G--~G~S~~~~~---~~~~~~~~~~~~~---~~l~~ 99 (295)
.+.|++|+|||.+ ++... |.. -..|+++| +=|+.+++|= +|.=+-+.- .....+..+.|++ +.+.+
T Consensus 92 ~~~PVmV~IHGG~y~~Gs~s~~~yd-gs~La~~g~vVvVSvNYRLG~lGfL~~~~~~~~~~~~~n~Gl~DqilALkWV~~ 170 (491)
T COG2272 92 EKLPVMVYIHGGGYIMGSGSEPLYD-GSALAARGDVVVVSVNYRLGALGFLDLSSLDTEDAFASNLGLLDQILALKWVRD 170 (491)
T ss_pred CCCcEEEEEeccccccCCCcccccC-hHHHHhcCCEEEEEeCcccccceeeehhhccccccccccccHHHHHHHHHHHHH
Confidence 3468999999963 33333 332 24577666 7888887761 221111100 0001112344543 55556
Q ss_pred HHHHhCCC-CceEEEEecccchHHHHHHHHhCcC---ccceeEEEcCCC
Q 022534 100 LLDVLEVK-YPFFLVVQGFLVGSYGLTWALKNPS---RISKLAILNSPL 144 (295)
Q Consensus 100 ~~~~l~~~-~~~~lv~~G~~~G~~~~~~a~~~p~---~v~~lil~~~p~ 144 (295)
-|+++|-+ +.+.|+ |.|.|++.+...+..|. .+.+.|+.|.+.
T Consensus 171 NIe~FGGDp~NVTl~--GeSAGa~si~~Lla~P~AkGLF~rAi~~Sg~~ 217 (491)
T COG2272 171 NIEAFGGDPQNVTLF--GESAGAASILTLLAVPSAKGLFHRAIALSGAA 217 (491)
T ss_pred HHHHhCCCccceEEe--eccchHHHHHHhhcCccchHHHHHHHHhCCCC
Confidence 67777643 446776 67887654443334443 567777765444
|
|
| >PLN02606 palmitoyl-protein thioesterase | Back alignment and domain information |
|---|
Probab=95.02 E-value=0.36 Score=41.76 Aligned_cols=99 Identities=11% Similarity=0.141 Sum_probs=56.1
Q ss_pred ceEEEEcCCC--CCCccchhhHHHhhh-CCCeEEEeCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhC----CCC
Q 022534 36 GTIVFLHGAP--SHSYSYRNVMSQMSD-AGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEELDKLLDVLE----VKY 108 (295)
Q Consensus 36 ~~vv~lHG~~--~~~~~w~~~~~~l~~-~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~l~~~~~~l~----~~~ 108 (295)
.|||+.||.+ ++......+.+.+.+ .++-+..+- .|-| ... ++.-... +.+..+++++. +.+
T Consensus 27 ~PvViwHGlgD~~~~~~~~~~~~~i~~~~~~pg~~v~-ig~~---~~~----s~~~~~~---~Qv~~vce~l~~~~~L~~ 95 (306)
T PLN02606 27 VPFVLFHGFGGECSNGKVSNLTQFLINHSGYPGTCVE-IGNG---VQD----SLFMPLR---QQASIACEKIKQMKELSE 95 (306)
T ss_pred CCEEEECCCCcccCCchHHHHHHHHHhCCCCCeEEEE-ECCC---ccc----ccccCHH---HHHHHHHHHHhcchhhcC
Confidence 5899999998 666677777777752 243332222 3322 111 1111233 33333433332 223
Q ss_pred ceEEEEecccchH-HHHHHHHhCcC--ccceeEEEcCCCCCC
Q 022534 109 PFFLVVQGFLVGS-YGLTWALKNPS--RISKLAILNSPLTAS 147 (295)
Q Consensus 109 ~~~lv~~G~~~G~-~~~~~a~~~p~--~v~~lil~~~p~~~~ 147 (295)
-+.+| |+|=|+ +.-.++.+.|+ .|+.+|-+++|....
T Consensus 96 G~naI--GfSQGglflRa~ierc~~~p~V~nlISlggph~Gv 135 (306)
T PLN02606 96 GYNIV--AESQGNLVARGLIEFCDNAPPVINYVSLGGPHAGV 135 (306)
T ss_pred ceEEE--EEcchhHHHHHHHHHCCCCCCcceEEEecCCcCCc
Confidence 46666 777554 45566777776 599999999886544
|
|
| >PLN02209 serine carboxypeptidase | Back alignment and domain information |
|---|
Probab=94.60 E-value=0.12 Score=47.64 Aligned_cols=60 Identities=17% Similarity=0.248 Sum_probs=47.4
Q ss_pred CCcEEEEEeCCCCCCCcchHHHHHhcCC-----------------------C-CeEEEEecCCCCCCCCCChHHHHHHHH
Q 022534 233 DKPVLVAWGISDKYLPQSVAEEFQKGNP-----------------------N-VVKLQMIEGAGHMPQEDWPEKVVDGLR 288 (295)
Q Consensus 233 ~~P~l~i~G~~D~~~~~~~~~~~~~~~~-----------------------~-~~~~~~i~~~gH~~~~e~p~~~~~~i~ 288 (295)
.+++|+..|+.|-+|+...++.+.+.+. . ..+++.+.+|||+++ .||++..+.+.
T Consensus 351 girVLiY~GD~D~icn~~Gte~wi~~L~w~~~~~~~~w~~~~q~aG~vk~y~n~Ltfv~V~~AGHmVp-~qP~~al~m~~ 429 (437)
T PLN02209 351 GYRSLIFSGDHDITMPFQATQAWIKSLNYSIIDDWRPWMIKGQIAGYTRTYSNKMTFATVKGGGHTAE-YLPEESSIMFQ 429 (437)
T ss_pred CceEEEEECCccccCCcHhHHHHHHhcCCccCCCeeeeEECCEeeeEEEEeCCceEEEEEcCCCCCcC-cCHHHHHHHHH
Confidence 4899999999999998766655443322 1 256778899999996 69999999999
Q ss_pred HHHHh
Q 022534 289 YFFLN 293 (295)
Q Consensus 289 ~fl~~ 293 (295)
+|+.+
T Consensus 430 ~fi~~ 434 (437)
T PLN02209 430 RWISG 434 (437)
T ss_pred HHHcC
Confidence 99864
|
|
| >PLN03016 sinapoylglucose-malate O-sinapoyltransferase | Back alignment and domain information |
|---|
Probab=94.48 E-value=0.13 Score=47.17 Aligned_cols=60 Identities=15% Similarity=0.205 Sum_probs=47.4
Q ss_pred CCcEEEEEeCCCCCCCcchHHHHHhcCC------------------------CCeEEEEecCCCCCCCCCChHHHHHHHH
Q 022534 233 DKPVLVAWGISDKYLPQSVAEEFQKGNP------------------------NVVKLQMIEGAGHMPQEDWPEKVVDGLR 288 (295)
Q Consensus 233 ~~P~l~i~G~~D~~~~~~~~~~~~~~~~------------------------~~~~~~~i~~~gH~~~~e~p~~~~~~i~ 288 (295)
++++|+..|+.|-+|+....+.+.+.+. +..+++.+.+|||+++ .+|++..+.+.
T Consensus 347 ~irVLiY~Gd~D~icn~~Gt~~wi~~L~w~~~~~~~~w~~~~~~~G~vk~y~n~ltfv~V~~AGHmVp-~qP~~al~m~~ 425 (433)
T PLN03016 347 GYRSLIYSGDHDIAVPFLATQAWIRSLNYSPIHNWRPWMINNQIAGYTRAYSNKMTFATIKAGGHTAE-YRPNETFIMFQ 425 (433)
T ss_pred CceEEEEECCccccCCcHhHHHHHHhCCCCCCCCcccccCCCEeeeEEEEeCCceEEEEEcCCCCCCC-CCHHHHHHHHH
Confidence 5899999999999998766655433221 1256788899999996 69999999999
Q ss_pred HHHHh
Q 022534 289 YFFLN 293 (295)
Q Consensus 289 ~fl~~ 293 (295)
+|+..
T Consensus 426 ~Fi~~ 430 (433)
T PLN03016 426 RWISG 430 (433)
T ss_pred HHHcC
Confidence 99965
|
|
| >COG3150 Predicted esterase [General function prediction only] | Back alignment and domain information |
|---|
Probab=94.44 E-value=0.37 Score=37.78 Aligned_cols=84 Identities=23% Similarity=0.331 Sum_probs=49.5
Q ss_pred EEEEcCCCCCCccchhhH--HHhhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCceEEEEe
Q 022534 38 IVFLHGAPSHSYSYRNVM--SQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEELDKLLDVLEVKYPFFLVVQ 115 (295)
Q Consensus 38 vv~lHG~~~~~~~w~~~~--~~l~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~~lv~~ 115 (295)
||+||||.+|..+.+.++ +.+.+ .. |-++.|-...+. .....++.+..++...+-..|. +|
T Consensus 2 ilYlHGFnSSP~shka~l~~q~~~~-~~-------~~i~y~~p~l~h------~p~~a~~ele~~i~~~~~~~p~-iv-- 64 (191)
T COG3150 2 ILYLHGFNSSPGSHKAVLLLQFIDE-DV-------RDIEYSTPHLPH------DPQQALKELEKAVQELGDESPL-IV-- 64 (191)
T ss_pred eEEEecCCCCcccHHHHHHHHHHhc-cc-------cceeeecCCCCC------CHHHHHHHHHHHHHHcCCCCce-EE--
Confidence 899999998888876443 33433 23 334444432221 3456778888888888766554 44
Q ss_pred cccchH-HHHHHHHhCcCccceeEEEc
Q 022534 116 GFLVGS-YGLTWALKNPSRISKLAILN 141 (295)
Q Consensus 116 G~~~G~-~~~~~a~~~p~~v~~lil~~ 141 (295)
|.|.|+ ++..++.++ -+++++ ++
T Consensus 65 GssLGGY~At~l~~~~--Girav~-~N 88 (191)
T COG3150 65 GSSLGGYYATWLGFLC--GIRAVV-FN 88 (191)
T ss_pred eecchHHHHHHHHHHh--CChhhh-cC
Confidence 555554 555555555 355554 44
|
|
| >COG1505 Serine proteases of the peptidase family S9A [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=93.89 E-value=1.2 Score=41.96 Aligned_cols=123 Identities=14% Similarity=0.063 Sum_probs=69.5
Q ss_pred EEeCcEEEEEEEcC-C-CCCCCceEEEEcCCCC--CCccchhhHHHhhhCCCeEEEeCCCCCCCCCC------CCCCCCC
Q 022534 16 IKSGEYRWFVRETG-S-ADSRLGTIVFLHGAPS--HSYSYRNVMSQMSDAGFHCFAPDWLGFGFSDK------PEKGYDD 85 (295)
Q Consensus 16 ~~~~~~~~~~~~~g-~-~~~~~~~vv~lHG~~~--~~~~w~~~~~~l~~~~~~via~Dl~G~G~S~~------~~~~~~~ 85 (295)
.+.+|.+|.|-..+ . ...++|++|+-=|..+ -.-.|......+.++|.-.+...+||=|.=.. ... +
T Consensus 400 tSkDGT~IPYFiv~K~~~~d~~pTll~aYGGF~vsltP~fs~~~~~WLerGg~~v~ANIRGGGEfGp~WH~Aa~k~---n 476 (648)
T COG1505 400 TSKDGTRIPYFIVRKGAKKDENPTLLYAYGGFNISLTPRFSGSRKLWLERGGVFVLANIRGGGEFGPEWHQAGMKE---N 476 (648)
T ss_pred EcCCCccccEEEEecCCcCCCCceEEEeccccccccCCccchhhHHHHhcCCeEEEEecccCCccCHHHHHHHhhh---c
Confidence 34489999997775 1 1224677766555433 23356666666666798999999998775431 000 1
Q ss_pred CCCCHHHHHHHHHHHHHHhCCCCceEEEEeccc-chHHHHHHH-HhCcCccceeEEEcCCC
Q 022534 86 FDFTENEFHEELDKLLDVLEVKYPFFLVVQGFL-VGSYGLTWA-LKNPSRISKLAILNSPL 144 (295)
Q Consensus 86 ~~~~~~~~~~~l~~~~~~l~~~~~~~lv~~G~~-~G~~~~~~a-~~~p~~v~~lil~~~p~ 144 (295)
-+=..+|++....+++++ |+..|=.|-..|-| ||-+ ...| .++||.+.+++ +..|.
T Consensus 477 rq~vfdDf~AVaedLi~r-gitspe~lgi~GgSNGGLL-vg~alTQrPelfgA~v-~evPl 534 (648)
T COG1505 477 KQNVFDDFIAVAEDLIKR-GITSPEKLGIQGGSNGGLL-VGAALTQRPELFGAAV-CEVPL 534 (648)
T ss_pred chhhhHHHHHHHHHHHHh-CCCCHHHhhhccCCCCceE-EEeeeccChhhhCcee-eccch
Confidence 111346777777777765 45444333222222 3322 1122 47999887665 44554
|
|
| >PF00135 COesterase: Carboxylesterase family The prints entry is specific to acetylcholinesterase; InterPro: IPR002018 Higher eukaryotes have many distinct esterases | Back alignment and domain information |
|---|
Probab=93.10 E-value=0.46 Score=44.73 Aligned_cols=107 Identities=12% Similarity=0.112 Sum_probs=52.2
Q ss_pred CCceEEEEcCCC---CCC-ccchhhHHHhhhCCCeEEEeCCC----CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH--
Q 022534 34 RLGTIVFLHGAP---SHS-YSYRNVMSQMSDAGFHCFAPDWL----GFGFSDKPEKGYDDFDFTENEFHEELDKLLDV-- 103 (295)
Q Consensus 34 ~~~~vv~lHG~~---~~~-~~w~~~~~~l~~~~~~via~Dl~----G~G~S~~~~~~~~~~~~~~~~~~~~l~~~~~~-- 103 (295)
+.|++|+|||.+ ++. .....-...++..+.=||++..| ||-.+...... ..++.+.|+...|.-+-+.
T Consensus 124 ~lPV~v~ihGG~f~~G~~~~~~~~~~~~~~~~~vivVt~nYRlg~~Gfl~~~~~~~~--~gN~Gl~Dq~~AL~WV~~nI~ 201 (535)
T PF00135_consen 124 KLPVMVWIHGGGFMFGSGSFPPYDGASLAASKDVIVVTINYRLGAFGFLSLGDLDAP--SGNYGLLDQRLALKWVQDNIA 201 (535)
T ss_dssp SEEEEEEE--STTTSSCTTSGGGHTHHHHHHHTSEEEEE----HHHHH-BSSSTTSH--BSTHHHHHHHHHHHHHHHHGG
T ss_pred ccceEEEeecccccCCCcccccccccccccCCCEEEEEecccccccccccccccccC--chhhhhhhhHHHHHHHHhhhh
Confidence 469999999964 333 12333334445558889999887 44333322111 0244556665555544443
Q ss_pred -hCCC-CceEEEEecccchHH--HHHHHH-hCcCccceeEEEcCCC
Q 022534 104 -LEVK-YPFFLVVQGFLVGSY--GLTWAL-KNPSRISKLAILNSPL 144 (295)
Q Consensus 104 -l~~~-~~~~lv~~G~~~G~~--~~~~a~-~~p~~v~~lil~~~p~ 144 (295)
.|-+ +.+.|. |+|.|+. +.++.. .-...+.+.|+.+++.
T Consensus 202 ~FGGDp~~VTl~--G~SAGa~sv~~~l~sp~~~~LF~raI~~SGs~ 245 (535)
T PF00135_consen 202 AFGGDPDNVTLF--GQSAGAASVSLLLLSPSSKGLFHRAILQSGSA 245 (535)
T ss_dssp GGTEEEEEEEEE--EETHHHHHHHHHHHGGGGTTSBSEEEEES--T
T ss_pred hcccCCcceeee--eecccccccceeeecccccccccccccccccc
Confidence 4422 336665 6666643 233322 2345789998887643
|
Among the different types are those which act on carboxylic esters (3.1.1 from EC). Carboxyl-esterases have been classified into three categories (A, B and C) on the basis of differential patterns of inhibition by organophosphates. The sequence of a number of type-B carboxylesterases indicates [, , ] that the majority are evolutionary related. As is the case for lipases and serine proteases, the catalytic apparatus of esterases involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.; PDB: 3B3Q_A 1CLE_B 1GQS_A 2VJD_A 1HBJ_A 2C5G_A 1U65_A 2WG1_A 1FSS_A 3M3D_A .... |
| >KOG1282 consensus Serine carboxypeptidases (lysosomal cathepsin A) [Posttranslational modification, protein turnover, chaperones; Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=92.95 E-value=0.27 Score=45.16 Aligned_cols=60 Identities=27% Similarity=0.312 Sum_probs=47.2
Q ss_pred CcEEEEEeCCCCCCCcchHHHHHhcC---------CC---------------CeEEEEecCCCCCCCCCChHHHHHHHHH
Q 022534 234 KPVLVAWGISDKYLPQSVAEEFQKGN---------PN---------------VVKLQMIEGAGHMPQEDWPEKVVDGLRY 289 (295)
Q Consensus 234 ~P~l~i~G~~D~~~~~~~~~~~~~~~---------~~---------------~~~~~~i~~~gH~~~~e~p~~~~~~i~~ 289 (295)
.++++..|+.|-++|....+..-+.+ |. +.+++.+.||||++..++|+.....+++
T Consensus 364 ~rvliysGD~D~~~p~~gt~~~i~~L~~~~~~~~~pW~~~~~qvaG~~~~Y~~ltf~tVrGaGH~VP~~~p~~al~m~~~ 443 (454)
T KOG1282|consen 364 YRVLIYSGDHDLVVPFLGTQAWIKSLNLSITDEWRPWYHKGGQVAGYTKTYGGLTFATVRGAGHMVPYDKPESALIMFQR 443 (454)
T ss_pred eEEEEEeCCcceeCcchhhHHHHHhccCccccCccCCccCCCceeeeEEEecCEEEEEEeCCcccCCCCCcHHHHHHHHH
Confidence 79999999999999876655431111 10 1355888999999999999999999999
Q ss_pred HHHh
Q 022534 290 FFLN 293 (295)
Q Consensus 290 fl~~ 293 (295)
|+.+
T Consensus 444 fl~g 447 (454)
T KOG1282|consen 444 FLNG 447 (454)
T ss_pred HHcC
Confidence 9976
|
|
| >PLN02633 palmitoyl protein thioesterase family protein | Back alignment and domain information |
|---|
Probab=92.70 E-value=1.6 Score=37.92 Aligned_cols=101 Identities=14% Similarity=0.158 Sum_probs=52.7
Q ss_pred ceEEEEcCCCCCCc--cchhhHHHhhh-CCCeEEEeCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh-CCCCceE
Q 022534 36 GTIVFLHGAPSHSY--SYRNVMSQMSD-AGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEELDKLLDVL-EVKYPFF 111 (295)
Q Consensus 36 ~~vv~lHG~~~~~~--~w~~~~~~l~~-~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~l~~~~~~l-~~~~~~~ 111 (295)
.|+|+.||.|.+-. .-..+.+.+.. .|.-++.+- -|.|. .. ++.....++++.+-+-+... .+.+-+.
T Consensus 26 ~P~ViwHG~GD~c~~~g~~~~~~l~~~~~g~~~~~i~---ig~~~--~~---s~~~~~~~Qve~vce~l~~~~~l~~G~n 97 (314)
T PLN02633 26 VPFIMLHGIGTQCSDATNANFTQLLTNLSGSPGFCLE---IGNGV--GD---SWLMPLTQQAEIACEKVKQMKELSQGYN 97 (314)
T ss_pred CCeEEecCCCcccCCchHHHHHHHHHhCCCCceEEEE---ECCCc--cc---cceeCHHHHHHHHHHHHhhchhhhCcEE
Confidence 48999999985433 23333333322 134444332 24431 11 22323344433333333321 1223466
Q ss_pred EEEecccchH-HHHHHHHhCcC--ccceeEEEcCCCCC
Q 022534 112 LVVQGFLVGS-YGLTWALKNPS--RISKLAILNSPLTA 146 (295)
Q Consensus 112 lv~~G~~~G~-~~~~~a~~~p~--~v~~lil~~~p~~~ 146 (295)
+| |+|=|+ ++-.++.+.|+ .|+.+|-+++|...
T Consensus 98 aI--GfSQGGlflRa~ierc~~~p~V~nlISlggph~G 133 (314)
T PLN02633 98 IV--GRSQGNLVARGLIEFCDGGPPVYNYISLAGPHAG 133 (314)
T ss_pred EE--EEccchHHHHHHHHHCCCCCCcceEEEecCCCCC
Confidence 66 777554 55566777776 59999999887654
|
|
| >COG0627 Predicted esterase [General function prediction only] | Back alignment and domain information |
|---|
Probab=92.04 E-value=0.96 Score=39.72 Aligned_cols=106 Identities=21% Similarity=0.306 Sum_probs=55.9
Q ss_pred CceEEEEcCCCCCCccch---hhHHHhhhCCCeEEEeCC--------------CCCCCCCCCCCCCC--CCC-CCHHH-H
Q 022534 35 LGTIVFLHGAPSHSYSYR---NVMSQMSDAGFHCFAPDW--------------LGFGFSDKPEKGYD--DFD-FTENE-F 93 (295)
Q Consensus 35 ~~~vv~lHG~~~~~~~w~---~~~~~l~~~~~~via~Dl--------------~G~G~S~~~~~~~~--~~~-~~~~~-~ 93 (295)
-|++.++||..++...|. .+-......+.-++++|- .|-|.|=..+.... ... |..+. +
T Consensus 54 ipV~~~l~G~t~~~~~~~~~~g~~~~a~~~g~~~~~p~t~~~~~~~~~~vv~p~G~~~sfY~d~~~~~~~~~~~q~~tfl 133 (316)
T COG0627 54 IPVLYLLSGLTCNEPNVYLLDGLRRQADESGWAVVTPDTSPRGAGVNISVVMPLGGGASFYSDWTQPPWASGPYQWETFL 133 (316)
T ss_pred CCEEEEeCCCCCCCCceEeccchhhhhhhcCeEEecCCCCcccCCCCccccccCCCccceecccccCccccCccchhHHH
Confidence 467888999987754443 222223334666666632 23333311111000 111 33343 3
Q ss_pred HHHHHHHHH-HhCCCC---ceEEEEecccchHH-HHHHHHhCcCccceeEEEcC
Q 022534 94 HEELDKLLD-VLEVKY---PFFLVVQGFLVGSY-GLTWALKNPSRISKLAILNS 142 (295)
Q Consensus 94 ~~~l~~~~~-~l~~~~---~~~lv~~G~~~G~~-~~~~a~~~p~~v~~lil~~~ 142 (295)
.+.+-..++ +..... ...++ |||||+. |+.+|+++|++++++.-++.
T Consensus 134 ~~ELP~~~~~~f~~~~~~~~~aI~--G~SMGG~GAl~lA~~~pd~f~~~sS~Sg 185 (316)
T COG0627 134 TQELPALWEAAFPADGTGDGRAIA--GHSMGGYGALKLALKHPDRFKSASSFSG 185 (316)
T ss_pred HhhhhHHHHHhcCcccccCCceeE--EEeccchhhhhhhhhCcchhceeccccc
Confidence 466664444 443221 12333 7888765 56789999999998876643
|
|
| >PF02089 Palm_thioest: Palmitoyl protein thioesterase; InterPro: IPR002472 Neuronal ceroid lipofuscinoses (NCL) represent a group of encephalopathies that occur in 1 in 12,500 children | Back alignment and domain information |
|---|
Probab=92.01 E-value=0.22 Score=42.61 Aligned_cols=105 Identities=19% Similarity=0.211 Sum_probs=46.4
Q ss_pred ceEEEEcCCCCC---CccchhhHHHhhhC--CCeEEEeCCCCCCCC-CCCCCCCCCCCCCHHHHHHHHHHHHHHh-CCCC
Q 022534 36 GTIVFLHGAPSH---SYSYRNVMSQMSDA--GFHCFAPDWLGFGFS-DKPEKGYDDFDFTENEFHEELDKLLDVL-EVKY 108 (295)
Q Consensus 36 ~~vv~lHG~~~~---~~~w~~~~~~l~~~--~~~via~Dl~G~G~S-~~~~~~~~~~~~~~~~~~~~l~~~~~~l-~~~~ 108 (295)
.|||+.||++.+ +..+..+.+.+.+. |--|..+++ |-|.+ |... ++.-..+++++.+-+.++.. .+.+
T Consensus 6 ~PvViwHGmGD~~~~~~~m~~i~~~i~~~~PG~yV~si~i-g~~~~~D~~~----s~f~~v~~Qv~~vc~~l~~~p~L~~ 80 (279)
T PF02089_consen 6 LPVVIWHGMGDSCCNPSSMGSIKELIEEQHPGTYVHSIEI-GNDPSEDVEN----SFFGNVNDQVEQVCEQLANDPELAN 80 (279)
T ss_dssp --EEEE--TT--S--TTTHHHHHHHHHHHSTT--EEE--S-SSSHHHHHHH----HHHSHHHHHHHHHHHHHHH-GGGTT
T ss_pred CcEEEEEcCccccCChhHHHHHHHHHHHhCCCceEEEEEE-CCCcchhhhh----hHHHHHHHHHHHHHHHHhhChhhhc
Confidence 489999999864 34566555544432 444555554 22221 1110 11112344444444444432 1234
Q ss_pred ceEEEEecccchH-HHHHHHHhCcC-ccceeEEEcCCCCCC
Q 022534 109 PFFLVVQGFLVGS-YGLTWALKNPS-RISKLAILNSPLTAS 147 (295)
Q Consensus 109 ~~~lv~~G~~~G~-~~~~~a~~~p~-~v~~lil~~~p~~~~ 147 (295)
-+.+| |+|=|+ +.-.++.+.|+ .|+.+|.+++|....
T Consensus 81 G~~~I--GfSQGgl~lRa~vq~c~~~~V~nlISlggph~Gv 119 (279)
T PF02089_consen 81 GFNAI--GFSQGGLFLRAYVQRCNDPPVHNLISLGGPHMGV 119 (279)
T ss_dssp -EEEE--EETCHHHHHHHHHHH-TSS-EEEEEEES--TT-B
T ss_pred ceeee--eeccccHHHHHHHHHCCCCCceeEEEecCccccc
Confidence 46676 777665 44456667665 699999998886543
|
Mutations in the palmitoyl protein thioesterase gene causing infantile neuronal ceroid lipofuscinosis []. The most common mutation results in intracellular accumulation of the polypeptide and undetectable enzyme activity in the brain. Direct sequencing of cDNAs derived from brain RNA of INCL patients has shown a mis-sense transversion of A to T at nucleotide position 364, which results in substitution of Trp for Arg at position 122 in the protein - Arg 122 is immediately adjacent to a lipase consensus sequence that contains the putative active site Ser of PPT. The occurrence of this and two other independent mutations in the PPT gene strongly suggests that defects in this gene cause INCL.; GO: 0008474 palmitoyl-(protein) hydrolase activity, 0006464 protein modification process; PDB: 3GRO_B 1PJA_A 1EXW_A 1EH5_A 1EI9_A. |
| >KOG2183 consensus Prolylcarboxypeptidase (angiotensinase C) [Posttranslational modification, protein turnover, chaperones; General function prediction only] | Back alignment and domain information |
|---|
Probab=91.37 E-value=0.98 Score=40.65 Aligned_cols=105 Identities=15% Similarity=0.159 Sum_probs=61.7
Q ss_pred ceEEEEcCCCCCCccch-------hhHHHhhhCCCeEEEeCCCCCCCCCCC------CCCCCCCCCCHHHHHHHHHHHHH
Q 022534 36 GTIVFLHGAPSHSYSYR-------NVMSQMSDAGFHCFAPDWLGFGFSDKP------EKGYDDFDFTENEFHEELDKLLD 102 (295)
Q Consensus 36 ~~vv~lHG~~~~~~~w~-------~~~~~l~~~~~~via~Dl~G~G~S~~~------~~~~~~~~~~~~~~~~~l~~~~~ 102 (295)
.||+|--|.=++...|- ++++.|. --+|...+|=||+|..= ....-+|. +-++-..|.++++.
T Consensus 81 gPIffYtGNEGdie~Fa~ntGFm~D~Ap~~~---AllVFaEHRyYGeS~PFG~~s~k~~~hlgyL-tseQALADfA~ll~ 156 (492)
T KOG2183|consen 81 GPIFFYTGNEGDIEWFANNTGFMWDLAPELK---ALLVFAEHRYYGESLPFGSQSYKDARHLGYL-TSEQALADFAELLT 156 (492)
T ss_pred CceEEEeCCcccHHHHHhccchHHhhhHhhC---ceEEEeehhccccCCCCcchhccChhhhccc-cHHHHHHHHHHHHH
Confidence 58999988765544432 4455553 47899999999999731 11100222 22233344444444
Q ss_pred Hh----CC-CCceEEEEecccchHHHHHHHHhCcCccceeEEEcCCCC
Q 022534 103 VL----EV-KYPFFLVVQGFLVGSYGLTWALKNPSRISKLAILNSPLT 145 (295)
Q Consensus 103 ~l----~~-~~~~~lv~~G~~~G~~~~~~a~~~p~~v~~lil~~~p~~ 145 (295)
.+ +. ..|++.+|+ .-||++++-+-++||.-|.+-...++|..
T Consensus 157 ~lK~~~~a~~~pvIafGG-SYGGMLaAWfRlKYPHiv~GAlAaSAPvl 203 (492)
T KOG2183|consen 157 FLKRDLSAEASPVIAFGG-SYGGMLAAWFRLKYPHIVLGALAASAPVL 203 (492)
T ss_pred HHhhccccccCcEEEecC-chhhHHHHHHHhcChhhhhhhhhccCceE
Confidence 43 32 245666532 23566677777899998888776666754
|
|
| >PF10340 DUF2424: Protein of unknown function (DUF2424); InterPro: IPR019436 Sterol homeostasis in eukaryotic cells relies on the reciprocal interconversion of free sterols and steryl esters | Back alignment and domain information |
|---|
Probab=89.75 E-value=7.4 Score=34.98 Aligned_cols=104 Identities=16% Similarity=0.224 Sum_probs=51.7
Q ss_pred CceEEEEcCCCCCCccchhhHHHhh------hCCCeEEEeCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCC
Q 022534 35 LGTIVFLHGAPSHSYSYRNVMSQMS------DAGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEELDKLLDVLEVKY 108 (295)
Q Consensus 35 ~~~vv~lHG~~~~~~~w~~~~~~l~------~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~ 108 (295)
.|+||++||+|=.-.....+++.|. + .-.+++.|.---. +... ++ .|-..+.+.++....+++..|.+
T Consensus 122 DpVlIYlHGGGY~l~~~p~qi~~L~~i~~~l~-~~SILvLDYsLt~--~~~~-~~-~yPtQL~qlv~~Y~~Lv~~~G~~- 195 (374)
T PF10340_consen 122 DPVLIYLHGGGYFLGTTPSQIEFLLNIYKLLP-EVSILVLDYSLTS--SDEH-GH-KYPTQLRQLVATYDYLVESEGNK- 195 (374)
T ss_pred CcEEEEEcCCeeEecCCHHHHHHHHHHHHHcC-CCeEEEEeccccc--cccC-CC-cCchHHHHHHHHHHHHHhccCCC-
Confidence 4899999998743333222222221 2 3477777765322 0000 11 12223445556666666555655
Q ss_pred ceEEEEecccc-hHHHHHHH--HhCcC---ccceeEEEcCCCCCC
Q 022534 109 PFFLVVQGFLV-GSYGLTWA--LKNPS---RISKLAILNSPLTAS 147 (295)
Q Consensus 109 ~~~lv~~G~~~-G~~~~~~a--~~~p~---~v~~lil~~~p~~~~ 147 (295)
.++|+ |-|. |.+++.+. ++.++ .-++++++ ||+...
T Consensus 196 nI~Lm--GDSAGGnL~Ls~LqyL~~~~~~~~Pk~~iLI-SPWv~l 237 (374)
T PF10340_consen 196 NIILM--GDSAGGNLALSFLQYLKKPNKLPYPKSAILI-SPWVNL 237 (374)
T ss_pred eEEEE--ecCccHHHHHHHHHHHhhcCCCCCCceeEEE-CCCcCC
Confidence 46665 5554 45554432 22211 13577777 677544
|
In Saccharomyces cerevisiae (Baker's yeast) sterol acetylation requires the acetyltransferase Atf2, whereas deacetylation requires Say1, a membrane-anchored deacetylase with a putative active site in the ER lumen. Lack of Say1 results in the secretion of acetylated sterols into the culture medium, indicating that the substrate specificity of Say1 determines whether acetylated sterols are secreted from the cells or whether they are deacetylated and retained. In S. cerevisiae cells lacking Say1 or Atf2 are sensitive against the plant-derived allylbenzene eugenol and both Say1 and Atf2 affect pregnenolone toxicity, indicating that lipid acetylation acts as a detoxification pathway []. Homologues of Say1 are present in the mammalian genome and can functionally substitute for Say1 in yeast demonstrating that part of this pathway has been evolutionarily conserved []. |
| >KOG3724 consensus Negative regulator of COPII vesicle formation [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
Probab=89.44 E-value=0.54 Score=45.58 Aligned_cols=97 Identities=20% Similarity=0.239 Sum_probs=53.6
Q ss_pred CceEEEEcCCCCCCccchhhHHH----------------hhhCCCeEEEeCCCC-----CCCCCCCCCCCCCCCCCHHHH
Q 022534 35 LGTIVFLHGAPSHSYSYRNVMSQ----------------MSDAGFHCFAPDWLG-----FGFSDKPEKGYDDFDFTENEF 93 (295)
Q Consensus 35 ~~~vv~lHG~~~~~~~w~~~~~~----------------l~~~~~~via~Dl~G-----~G~S~~~~~~~~~~~~~~~~~ 93 (295)
.-||+||-|..|+-..=+-++.. .....|+.++.|+=+ ||+ ++.++
T Consensus 89 GIPVLFIPGNAGSyKQvRSiAS~a~n~y~~~~~e~t~~~d~~~~~DFFaVDFnEe~tAm~G~-------------~l~dQ 155 (973)
T KOG3724|consen 89 GIPVLFIPGNAGSYKQVRSIASVAQNAYQGGPFEKTEDRDNPFSFDFFAVDFNEEFTAMHGH-------------ILLDQ 155 (973)
T ss_pred CceEEEecCCCCchHHHHHHHHHHhhhhcCCchhhhhcccCccccceEEEcccchhhhhccH-------------hHHHH
Confidence 45899999987765443332222 122457777777753 222 33444
Q ss_pred HHHHHHHHHHh-----C---C----CCceEEEEecccchHHHHHHHHhCc----CccceeEEEcCCCCC
Q 022534 94 HEELDKLLDVL-----E---V----KYPFFLVVQGFLVGSYGLTWALKNP----SRISKLAILNSPLTA 146 (295)
Q Consensus 94 ~~~l~~~~~~l-----~---~----~~~~~lv~~G~~~G~~~~~~a~~~p----~~v~~lil~~~p~~~ 146 (295)
++-+.+.++.+ + . .+.++++ |||||++.+..++.+| +.|.-++..++|...
T Consensus 156 tEYV~dAIk~ILslYr~~~e~~~p~P~sVILV--GHSMGGiVAra~~tlkn~~~~sVntIITlssPH~a 222 (973)
T KOG3724|consen 156 TEYVNDAIKYILSLYRGEREYASPLPHSVILV--GHSMGGIVARATLTLKNEVQGSVNTIITLSSPHAA 222 (973)
T ss_pred HHHHHHHHHHHHHHhhcccccCCCCCceEEEE--eccchhHHHHHHHhhhhhccchhhhhhhhcCcccC
Confidence 44444444432 1 0 1225666 8888877666666555 455555666676543
|
|
| >PF06259 Abhydrolase_8: Alpha/beta hydrolase; InterPro: IPR010427 This is a family of uncharacterised proteins found in Actinobacteria | Back alignment and domain information |
|---|
Probab=89.30 E-value=9.5 Score=30.47 Aligned_cols=118 Identities=18% Similarity=0.211 Sum_probs=63.3
Q ss_pred EEcCCCCCCCceEEEEcCCCCCCccc----hhhH----HHhh------hCCCeEEEeCCCCCCCCCCCCCCCCCCCCCHH
Q 022534 26 RETGSADSRLGTIVFLHGAPSHSYSY----RNVM----SQMS------DAGFHCFAPDWLGFGFSDKPEKGYDDFDFTEN 91 (295)
Q Consensus 26 ~~~g~~~~~~~~vv~lHG~~~~~~~w----~~~~----~~l~------~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~ 91 (295)
...|+.+...-+.+++.|.+.+.... .... +.+. ..+=+|-.+-|.||=.=........... .-+
T Consensus 10 va~GD~d~A~~Vav~VPG~~t~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~vAvV~WlgYdaP~~~~~~a~~~~-~A~ 88 (177)
T PF06259_consen 10 VAVGDPDTADHVAVLVPGTGTTLDSFLGGMDDEARALRAAAARAARAAGPGGSVAVVAWLGYDAPAGGLPDAASPG-YAR 88 (177)
T ss_pred EEECCcCCcCeeEEEcCCCCCCcccccchhHHHHHHHHHHHHHHHHhhcCCCCeEEEEEcCCCCCCCccccccCch-HHH
Confidence 34587766566899999987655431 1111 1111 1122454555555432110000000001 123
Q ss_pred HHHHHHHHHHHHhCCCC----ceEEEEecccchHHHHHHHHhC-cCccceeEEEcCCCCC
Q 022534 92 EFHEELDKLLDVLEVKY----PFFLVVQGFLVGSYGLTWALKN-PSRISKLAILNSPLTA 146 (295)
Q Consensus 92 ~~~~~l~~~~~~l~~~~----~~~lv~~G~~~G~~~~~~a~~~-p~~v~~lil~~~p~~~ 146 (295)
.-+..|..|++.|.-.. .+.++ |||-||.....|++. +..+..++++.||-..
T Consensus 89 ~ga~~L~~f~~gl~a~~~~~~~~tv~--GHSYGS~v~G~A~~~~~~~vddvv~~GSPG~g 146 (177)
T PF06259_consen 89 AGAPRLARFLDGLRATHGPDAHLTVV--GHSYGSTVVGLAAQQGGLRVDDVVLVGSPGMG 146 (177)
T ss_pred HHHHHHHHHHHHhhhhcCCCCCEEEE--EecchhHHHHHHhhhCCCCcccEEEECCCCCC
Confidence 45667777777664322 34555 778888767777765 7789999999887543
|
Computational analysis suggests that they may belong to the alpha-beta hydrolase family of enzymes, as they are predicted to form the core secondary structures and catalytic machinery common to these proteins []. Genomic context suggests that they may function as lipases, controlling the concentration of their putative phospholipid substrates. |
| >KOG2541 consensus Palmitoyl protein thioesterase [Lipid transport and metabolism; Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=89.15 E-value=7.1 Score=33.25 Aligned_cols=99 Identities=15% Similarity=0.208 Sum_probs=54.3
Q ss_pred ceEEEEcCCCCCCcc--chhhHHHhhhC-CCeEEEeCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhC----CCC
Q 022534 36 GTIVFLHGAPSHSYS--YRNVMSQMSDA-GFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEELDKLLDVLE----VKY 108 (295)
Q Consensus 36 ~~vv~lHG~~~~~~~--w~~~~~~l~~~-~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~l~~~~~~l~----~~~ 108 (295)
-|+|++||.+.+..+ ...+.+.+.+. |.-|++.|. |-| -. . ++..... +.+..+++++. +.+
T Consensus 24 ~P~ii~HGigd~c~~~~~~~~~q~l~~~~g~~v~~lei-g~g--~~--~---s~l~pl~---~Qv~~~ce~v~~m~~lsq 92 (296)
T KOG2541|consen 24 VPVIVWHGIGDSCSSLSMANLTQLLEELPGSPVYCLEI-GDG--IK--D---SSLMPLW---EQVDVACEKVKQMPELSQ 92 (296)
T ss_pred CCEEEEeccCcccccchHHHHHHHHHhCCCCeeEEEEe-cCC--cc--h---hhhccHH---HHHHHHHHHHhcchhccC
Confidence 489999999865554 55666555532 678888885 444 11 0 1111223 34444444443 223
Q ss_pred ceEEEEecccchHH-HHHHHHhCc-CccceeEEEcCCCCCC
Q 022534 109 PFFLVVQGFLVGSY-GLTWALKNP-SRISKLAILNSPLTAS 147 (295)
Q Consensus 109 ~~~lv~~G~~~G~~-~~~~a~~~p-~~v~~lil~~~p~~~~ 147 (295)
-+.++ |.|=|++ +-.++..-+ ..|+.+|-+++|....
T Consensus 93 Gyniv--g~SQGglv~Raliq~cd~ppV~n~ISL~gPhaG~ 131 (296)
T KOG2541|consen 93 GYNIV--GYSQGGLVARALIQFCDNPPVKNFISLGGPHAGI 131 (296)
T ss_pred ceEEE--EEccccHHHHHHHHhCCCCCcceeEeccCCcCCc
Confidence 35555 6665554 333333322 2688999888876543
|
|
| >PF07082 DUF1350: Protein of unknown function (DUF1350); InterPro: IPR010765 This family consists of several hypothetical proteins from both cyanobacteria and plants | Back alignment and domain information |
|---|
Probab=89.11 E-value=1.4 Score=36.94 Aligned_cols=38 Identities=26% Similarity=0.571 Sum_probs=27.3
Q ss_pred CCceEEEEcCCC-CC-C-ccchhhHHHhhhCCCeEEEeCCC
Q 022534 34 RLGTIVFLHGAP-SH-S-YSYRNVMSQMSDAGFHCFAPDWL 71 (295)
Q Consensus 34 ~~~~vv~lHG~~-~~-~-~~w~~~~~~l~~~~~~via~Dl~ 71 (295)
++.+|=|+-|.. ++ . -.|+.+++.|+++||.|+|.=..
T Consensus 16 P~gvihFiGGaf~ga~P~itYr~lLe~La~~Gy~ViAtPy~ 56 (250)
T PF07082_consen 16 PKGVIHFIGGAFVGAAPQITYRYLLERLADRGYAVIATPYV 56 (250)
T ss_pred CCEEEEEcCcceeccCcHHHHHHHHHHHHhCCcEEEEEecC
Confidence 455777777742 22 2 35889999999999999986553
|
Members of this family are typically around 250 residues in length. The function of this family is unknown but the species distribution indicates that the family may be involved in photosynthesis. |
| >KOG3967 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=88.59 E-value=6.7 Score=32.21 Aligned_cols=105 Identities=14% Similarity=0.221 Sum_probs=53.1
Q ss_pred CceEEEEcCCCC-CCccch------------hhHHHhh---hCCCeEEEeCCC---CCCCC-CCCCCCCCCCCCCHHHHH
Q 022534 35 LGTIVFLHGAPS-HSYSYR------------NVMSQMS---DAGFHCFAPDWL---GFGFS-DKPEKGYDDFDFTENEFH 94 (295)
Q Consensus 35 ~~~vv~lHG~~~-~~~~w~------------~~~~~l~---~~~~~via~Dl~---G~G~S-~~~~~~~~~~~~~~~~~~ 94 (295)
+.-+|+|||-|- -.+.|- .++++.. +.||.|+...-- -+-.+ +.|.... .-.++...
T Consensus 101 ~kLlVLIHGSGvVrAGQWARrLIIN~~Ld~GTQiPyi~rAv~~Gygviv~N~N~~~kfye~k~np~kyi---rt~veh~~ 177 (297)
T KOG3967|consen 101 QKLLVLIHGSGVVRAGQWARRLIINEDLDSGTQIPYIKRAVAEGYGVIVLNPNRERKFYEKKRNPQKYI---RTPVEHAK 177 (297)
T ss_pred cceEEEEecCceEecchHhhhhhhccccccCCcChHHHHHHHcCCcEEEeCCchhhhhhhcccCcchhc---cchHHHHH
Confidence 347999999762 334442 2233322 358999887543 11111 1111110 10122222
Q ss_pred HHHHHHHHHhCCCCceEEEEecccchHHHHHHHHhCcC--ccceeEEEcCCC
Q 022534 95 EELDKLLDVLEVKYPFFLVVQGFLVGSYGLTWALKNPS--RISKLAILNSPL 144 (295)
Q Consensus 95 ~~l~~~~~~l~~~~~~~lv~~G~~~G~~~~~~a~~~p~--~v~~lil~~~p~ 144 (295)
-....++.....+ .+++++|.. ||+..+.+..++|+ +|.++.+.++++
T Consensus 178 yvw~~~v~pa~~~-sv~vvahsy-GG~~t~~l~~~f~~d~~v~aialTDs~~ 227 (297)
T KOG3967|consen 178 YVWKNIVLPAKAE-SVFVVAHSY-GGSLTLDLVERFPDDESVFAIALTDSAM 227 (297)
T ss_pred HHHHHHhcccCcc-eEEEEEecc-CChhHHHHHHhcCCccceEEEEeecccc
Confidence 2223333333334 366776643 66766777777775 677777777764
|
|
| >KOG4840 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=88.29 E-value=3.9 Score=33.84 Aligned_cols=90 Identities=19% Similarity=0.323 Sum_probs=55.1
Q ss_pred eEEEEcCCCCCC--ccch-hhHHHhhhCCCeEEEeCCC----CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCC--
Q 022534 37 TIVFLHGAPSHS--YSYR-NVMSQMSDAGFHCFAPDWL----GFGFSDKPEKGYDDFDFTENEFHEELDKLLDVLEVK-- 107 (295)
Q Consensus 37 ~vv~lHG~~~~~--~~w~-~~~~~l~~~~~~via~Dl~----G~G~S~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~-- 107 (295)
.|||+-|.+..- ..|. .+..+|.+.++..+-+-++ |+|-+ ++++=++|+.+++++++..
T Consensus 38 ~vvfiGGLgdgLl~~~y~~~L~~~lde~~wslVq~q~~Ssy~G~Gt~------------slk~D~edl~~l~~Hi~~~~f 105 (299)
T KOG4840|consen 38 KVVFIGGLGDGLLICLYTTMLNRYLDENSWSLVQPQLRSSYNGYGTF------------SLKDDVEDLKCLLEHIQLCGF 105 (299)
T ss_pred EEEEEcccCCCccccccHHHHHHHHhhccceeeeeeccccccccccc------------cccccHHHHHHHHHHhhccCc
Confidence 689999987643 3343 4455566668888888776 33322 4455568999999987543
Q ss_pred -CceEEEEecccchHHHHHHHH---hCcCccceeEEE
Q 022534 108 -YPFFLVVQGFLVGSYGLTWAL---KNPSRISKLAIL 140 (295)
Q Consensus 108 -~~~~lv~~G~~~G~~~~~~a~---~~p~~v~~lil~ 140 (295)
..++|+ |||.|+=-+.+-+ .-|..|..-|+.
T Consensus 106 St~vVL~--GhSTGcQdi~yYlTnt~~~r~iraaIlq 140 (299)
T KOG4840|consen 106 STDVVLV--GHSTGCQDIMYYLTNTTKDRKIRAAILQ 140 (299)
T ss_pred ccceEEE--ecCccchHHHHHHHhccchHHHHHHHHh
Confidence 246666 7888873222212 244456555544
|
|
| >COG4553 DepA Poly-beta-hydroxyalkanoate depolymerase [Lipid metabolism] | Back alignment and domain information |
|---|
Probab=86.57 E-value=10 Score=32.83 Aligned_cols=106 Identities=13% Similarity=0.227 Sum_probs=67.8
Q ss_pred CceEEEEcCCCCCC-ccchhhHHHhhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCceEEE
Q 022534 35 LGTIVFLHGAPSHS-YSYRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEELDKLLDVLEVKYPFFLV 113 (295)
Q Consensus 35 ~~~vv~lHG~~~~~-~~w~~~~~~l~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~~lv 113 (295)
.|.||++--.+++. ..-+..++.|.. ...|+.-|+.--- --|.. .-.+.++||++-+.+++..+|-+-.++-|
T Consensus 103 dPkvLivapmsGH~aTLLR~TV~alLp-~~~vyitDW~dAr--~Vp~~---~G~FdldDYIdyvie~~~~~Gp~~hv~aV 176 (415)
T COG4553 103 DPKVLIVAPMSGHYATLLRGTVEALLP-YHDVYITDWVDAR--MVPLE---AGHFDLDDYIDYVIEMINFLGPDAHVMAV 176 (415)
T ss_pred CCeEEEEecccccHHHHHHHHHHHhcc-ccceeEeeccccc--eeecc---cCCccHHHHHHHHHHHHHHhCCCCcEEEE
Confidence 45677776666654 456677777765 5789999997221 11221 12456799999999999999976433333
Q ss_pred Eecc--cchHHHHHHHHhCcCccceeEEEcCCCCC
Q 022534 114 VQGF--LVGSYGLTWALKNPSRISKLAILNSPLTA 146 (295)
Q Consensus 114 ~~G~--~~G~~~~~~a~~~p~~v~~lil~~~p~~~ 146 (295)
++-. ..++++++-+...|..-.+.+++++|.+.
T Consensus 177 CQP~vPvLAAisLM~~~~~p~~PssMtlmGgPIDa 211 (415)
T COG4553 177 CQPTVPVLAAISLMEEDGDPNVPSSMTLMGGPIDA 211 (415)
T ss_pred ecCCchHHHHHHHHHhcCCCCCCceeeeecCcccc
Confidence 3321 12334444455678777889999888764
|
|
| >KOG3847 consensus Phospholipase A2 (platelet-activating factor acetylhydrolase in humans) [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=85.05 E-value=0.97 Score=39.20 Aligned_cols=43 Identities=19% Similarity=0.262 Sum_probs=36.9
Q ss_pred CCceEEEEcCCCCCCccchhhHHHhhhCCCeEEEeCCCCCCCC
Q 022534 34 RLGTIVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGFGFS 76 (295)
Q Consensus 34 ~~~~vv~lHG~~~~~~~w~~~~~~l~~~~~~via~Dl~G~G~S 76 (295)
+-|.+||-||.+++-..|..+--.|+.+||-|.|+.+|-+-.+
T Consensus 117 k~PvvvFSHGLggsRt~YSa~c~~LAShG~VVaavEHRD~SA~ 159 (399)
T KOG3847|consen 117 KYPVVVFSHGLGGSRTLYSAYCTSLASHGFVVAAVEHRDRSAC 159 (399)
T ss_pred CccEEEEecccccchhhHHHHhhhHhhCceEEEEeecccCcce
Confidence 3489999999999999999888889989999999999855433
|
|
| >PLN03016 sinapoylglucose-malate O-sinapoyltransferase | Back alignment and domain information |
|---|
Probab=83.84 E-value=17 Score=33.51 Aligned_cols=99 Identities=21% Similarity=0.184 Sum_probs=52.0
Q ss_pred eEEeC---cEEEEEEEcC--CCCCCCceEEEEcCCCCCCccchh---hHHH--------------------hhhCCCeEE
Q 022534 15 YIKSG---EYRWFVRETG--SADSRLGTIVFLHGAPSHSYSYRN---VMSQ--------------------MSDAGFHCF 66 (295)
Q Consensus 15 ~~~~~---~~~~~~~~~g--~~~~~~~~vv~lHG~~~~~~~w~~---~~~~--------------------l~~~~~~vi 66 (295)
|++++ +..+||.... ......|.|+++-|+|+++..+-. .-+. |.+ ...++
T Consensus 41 y~~v~~~~~~~lfy~f~es~~~~~~~P~~lWlnGGPG~SS~~g~~~e~GP~~~~~~~~~~~~~~l~~n~~sW~~-~anll 119 (433)
T PLN03016 41 YIGIGEDENVQFFYYFIKSENNPKEDPLLIWLNGGPGCSCLGGIIFENGPVGLKFEVFNGSAPSLFSTTYSWTK-MANII 119 (433)
T ss_pred EEEecCCCCeEEEEEEEecCCCcccCCEEEEEcCCCcHHHHHHHHHhcCCceeeccccCCCCCceeeCCCchhh-cCcEE
Confidence 45553 3445554432 222346899999999887764321 1111 222 47899
Q ss_pred EeC-CCCCCCCCCCCCCCCCCCC-CHHHHHHHHHHHHHHhC--CCCceEEEE
Q 022534 67 APD-WLGFGFSDKPEKGYDDFDF-TENEFHEELDKLLDVLE--VKYPFFLVV 114 (295)
Q Consensus 67 a~D-l~G~G~S~~~~~~~~~~~~-~~~~~~~~l~~~~~~l~--~~~~~~lv~ 114 (295)
.+| -.|.|.|-.........+. ..+++...+..|+++.. .+.++++.|
T Consensus 120 fiDqPvGtGfSy~~~~~~~~~d~~~a~~~~~fl~~f~~~~p~~~~~~~yi~G 171 (433)
T PLN03016 120 FLDQPVGSGFSYSKTPIDKTGDISEVKRTHEFLQKWLSRHPQYFSNPLYVVG 171 (433)
T ss_pred EecCCCCCCccCCCCCCCccCCHHHHHHHHHHHHHHHHhChhhcCCCEEEEc
Confidence 999 5688988643221101010 11244455555555432 245677774
|
|
| >PLN02517 phosphatidylcholine-sterol O-acyltransferase | Back alignment and domain information |
|---|
Probab=83.16 E-value=3.6 Score=39.15 Aligned_cols=91 Identities=9% Similarity=0.178 Sum_probs=49.0
Q ss_pred ccchhhHHHhhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh---CCCCceEEEEecccchHH-HH
Q 022534 49 YSYRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEELDKLLDVL---EVKYPFFLVVQGFLVGSY-GL 124 (295)
Q Consensus 49 ~~w~~~~~~l~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~l~~~~~~l---~~~~~~~lv~~G~~~G~~-~~ 124 (295)
+.|..+++.|++.||. --|+.|...==+.... . ...-++|...+..+++.. +-+++++|| |||+|+. ..
T Consensus 156 ~vw~kLIe~L~~iGY~--~~nL~gAPYDWRls~~--~-le~rd~YF~rLK~lIE~ay~~nggkKVVLV--~HSMGglv~l 228 (642)
T PLN02517 156 FVWAVLIANLARIGYE--EKNMYMAAYDWRLSFQ--N-TEVRDQTLSRLKSNIELMVATNGGKKVVVV--PHSMGVLYFL 228 (642)
T ss_pred eeHHHHHHHHHHcCCC--CCceeecccccccCcc--c-hhhhhHHHHHHHHHHHHHHHHcCCCeEEEE--EeCCchHHHH
Confidence 4679999999987886 2333332211010000 0 001245666666666643 334567777 7788864 33
Q ss_pred HHHHhC-----------c----CccceeEEEcCCCCC
Q 022534 125 TWALKN-----------P----SRISKLAILNSPLTA 146 (295)
Q Consensus 125 ~~a~~~-----------p----~~v~~lil~~~p~~~ 146 (295)
.+...- + ..|++.|.+++|+..
T Consensus 229 yFL~wv~~~~~~gG~gG~~W~dKyI~s~I~Iagp~lG 265 (642)
T PLN02517 229 HFMKWVEAPAPMGGGGGPGWCAKHIKAVMNIGGPFLG 265 (642)
T ss_pred HHHHhccccccccCCcchHHHHHHHHHheecccccCC
Confidence 322110 1 247888888777653
|
|
| >KOG3101 consensus Esterase D [General function prediction only] | Back alignment and domain information |
|---|
Probab=80.97 E-value=1.4 Score=36.09 Aligned_cols=106 Identities=23% Similarity=0.361 Sum_probs=56.8
Q ss_pred CceEEEEcCCCCCCccchh---hHHHhhhCCCeEEEeCCCCCC-----CCCC-------------CCCCCCCCCCCHHHH
Q 022534 35 LGTIVFLHGAPSHSYSYRN---VMSQMSDAGFHCFAPDWLGFG-----FSDK-------------PEKGYDDFDFTENEF 93 (295)
Q Consensus 35 ~~~vv~lHG~~~~~~~w~~---~~~~l~~~~~~via~Dl~G~G-----~S~~-------------~~~~~~~~~~~~~~~ 93 (295)
-|++.+|-|..+....+-. +...-++.|+-|++||--=-| .++. ....+ ..+|.+=+|
T Consensus 44 ~P~lf~LSGLTCT~~Nfi~Ksg~qq~As~hgl~vV~PDTSPRG~~v~g~~eswDFG~GAGFYvnAt~epw-~~~yrMYdY 122 (283)
T KOG3101|consen 44 CPVLFYLSGLTCTHENFIEKSGFQQQASKHGLAVVAPDTSPRGVEVAGDDESWDFGQGAGFYVNATQEPW-AKHYRMYDY 122 (283)
T ss_pred CceEEEecCCcccchhhHhhhhHHHhHhhcCeEEECCCCCCCccccCCCcccccccCCceeEEecccchH-hhhhhHHHH
Confidence 4788889999988776531 222233568999999964333 1211 11111 112333222
Q ss_pred -HHHHHHHHHHhC----CCCceEEEEecccchHHH-HHHHHhCcCccceeEEEcCCCC
Q 022534 94 -HEELDKLLDVLE----VKYPFFLVVQGFLVGSYG-LTWALKNPSRISKLAILNSPLT 145 (295)
Q Consensus 94 -~~~l~~~~~~l~----~~~~~~lv~~G~~~G~~~-~~~a~~~p~~v~~lil~~~p~~ 145 (295)
.+.+-+++..-+ ..+ +-+. |||||+.| +..+++.|.+.+++-.. +|..
T Consensus 123 v~kELp~~l~~~~~pld~~k-~~If--GHSMGGhGAl~~~Lkn~~kykSvSAF-API~ 176 (283)
T KOG3101|consen 123 VVKELPQLLNSANVPLDPLK-VGIF--GHSMGGHGALTIYLKNPSKYKSVSAF-APIC 176 (283)
T ss_pred HHHHHHHHhccccccccchh-ccee--ccccCCCceEEEEEcCcccccceecc-cccc
Confidence 234444443211 122 2333 88887654 45567999998888766 3444
|
|
| >PLN02209 serine carboxypeptidase | Back alignment and domain information |
|---|
Probab=80.15 E-value=46 Score=30.83 Aligned_cols=67 Identities=21% Similarity=0.218 Sum_probs=40.2
Q ss_pred cceeeEEeC---cEEEEEEEcC--CCCCCCceEEEEcCCCCCCccchhhHH-----------------------HhhhCC
Q 022534 11 EYGSYIKSG---EYRWFVRETG--SADSRLGTIVFLHGAPSHSYSYRNVMS-----------------------QMSDAG 62 (295)
Q Consensus 11 ~~~~~~~~~---~~~~~~~~~g--~~~~~~~~vv~lHG~~~~~~~w~~~~~-----------------------~l~~~~ 62 (295)
-+.-+++++ +..++|.... ......|.++++-|+|+++..+..+.+ -|.+ .
T Consensus 39 ~~sGy~~v~~~~~~~lf~~f~es~~~~~~~Pl~lWlnGGPG~SS~~g~f~e~GP~~~~~~~~~~~~~~l~~n~~sW~~-~ 117 (437)
T PLN02209 39 LETGYIGIGEEENVQFFYYFIKSDKNPQEDPLIIWLNGGPGCSCLSGLFFENGPLALKNKVYNGSVPSLVSTTYSWTK-T 117 (437)
T ss_pred EEEEEEEecCCCCeEEEEEEEecCCCCCCCCEEEEECCCCcHHHhhhHHHhcCCceeccCCCCCCcccceeCCCchhh-c
Confidence 344456664 3445554433 222336899999999988776633221 1222 4
Q ss_pred CeEEEeC-CCCCCCCCC
Q 022534 63 FHCFAPD-WLGFGFSDK 78 (295)
Q Consensus 63 ~~via~D-l~G~G~S~~ 78 (295)
..++.+| -.|.|.|-.
T Consensus 118 anllfiDqPvGtGfSy~ 134 (437)
T PLN02209 118 ANIIFLDQPVGSGFSYS 134 (437)
T ss_pred CcEEEecCCCCCCccCC
Confidence 6899999 458888854
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 295 | ||||
| 2dhd_A | 310 | Crystallographic Analysis Of The Catalytic Mechanis | 1e-13 | ||
| 1bee_A | 310 | Haloalkane Dehalogenase Mutant With Trp 175 Replace | 1e-13 | ||
| 1edb_A | 310 | Crystallographic And Fluorescence Studies Of The In | 1e-13 | ||
| 1cij_A | 310 | Haloalkane Dehalogenase Soaked With High Concentrat | 1e-13 | ||
| 1b6g_A | 310 | Haloalkane Dehalogenase At Ph 5.0 Containing Chlori | 1e-13 | ||
| 1hde_A | 310 | Haloalkane Dehalogenase Mutant With Phe 172 Replace | 2e-13 | ||
| 2xt0_A | 297 | Dehalogenase Dppa From Plesiocystis Pacifica Sir-I | 6e-10 | ||
| 4f60_A | 299 | Crystal Structure Of Rhodococcus Rhodochrous Haloal | 6e-09 | ||
| 3a2l_A | 309 | Crystal Structure Of Dbja (Mutant Dbja Delta) Lengt | 6e-09 | ||
| 3afi_E | 316 | Crystal Structure Of Dbja (His-Dbja) Length = 316 | 6e-09 | ||
| 3a2m_A | 312 | Crystal Structure Of Dbja (Wild Type Type I) Length | 6e-09 | ||
| 3fbw_A | 299 | Structure Of Rhodococcus Rhodochrous Haloalkane Deh | 9e-09 | ||
| 1bn6_A | 294 | Haloalkane Dehalogenase From A Rhodococcus Species | 1e-08 | ||
| 1cqw_A | 295 | Nai Cocrystallised With Haloalkane Dehalogenase Fro | 2e-08 | ||
| 3fwh_A | 299 | Structure Of Haloalkane Dehalogenase Mutant Dha15 ( | 2e-08 | ||
| 4fwb_A | 292 | Structure Of Rhodococcus Rhodochrous Haloalkane Deh | 2e-08 | ||
| 3rk4_A | 299 | Structure Of Rhodococcus Rhodochrous Haloalkane Deh | 2e-08 | ||
| 3g9x_A | 299 | Structure Of Haloalkane Dehalogenase Dhaa14 Mutant | 2e-08 | ||
| 4f5z_A | 299 | Crystal Structure Of Rhodococcus Rhodochrous Haloal | 3e-08 | ||
| 3sk0_A | 311 | Structure Of Rhodococcus Rhodochrous Haloalkane Deh | 5e-08 | ||
| 2v9z_A | 304 | Structure Of The Rhodococcus Haloalkane Dehalogenas | 6e-08 | ||
| 3u1t_A | 309 | Haloalkane Dehalogenase, Dmma, Of Marine Microbial | 1e-06 | ||
| 2qvb_A | 297 | Crystal Structure Of Haloalkane Dehalogenase Rv2579 | 4e-06 | ||
| 2o2h_A | 300 | Crystal Structure Of Haloalkane Dehalogenase Rv2579 | 4e-06 | ||
| 3kxp_A | 314 | Crystal Structure Of E-2-(Acetamidomethylene)succin | 1e-04 | ||
| 1iz7_A | 295 | Re-Refinement Of The Structure Of Hydrolytic Haloal | 5e-04 | ||
| 1g5f_A | 296 | Structure Of Linb Complexed With 1,2-Dichloroethane | 5e-04 | ||
| 1mj5_A | 302 | Linb (Haloalkane Dehalogenase) From Sphingomonas Pa | 5e-04 | ||
| 1cv2_A | 296 | Hydrolytic Haloalkane Dehalogenase Linb From Sphing | 5e-04 |
| >pdb|2DHD|A Chain A, Crystallographic Analysis Of The Catalytic Mechanism Of Haloalkane Dehalogenase Length = 310 | Back alignment and structure |
|
| >pdb|1BEE|A Chain A, Haloalkane Dehalogenase Mutant With Trp 175 Replaced By Tyr Length = 310 | Back alignment and structure |
|
| >pdb|1EDB|A Chain A, Crystallographic And Fluorescence Studies Of The Interaction Of Haloalkane Dehalogenase With Halide Ions: Studies With Halide Compounds Reveal A Halide Binding Site In The Active Site Length = 310 | Back alignment and structure |
|
| >pdb|1CIJ|A Chain A, Haloalkane Dehalogenase Soaked With High Concentration Of Bromide Length = 310 | Back alignment and structure |
|
| >pdb|1B6G|A Chain A, Haloalkane Dehalogenase At Ph 5.0 Containing Chloride Length = 310 | Back alignment and structure |
|
| >pdb|1HDE|A Chain A, Haloalkane Dehalogenase Mutant With Phe 172 Replaced With Trp Length = 310 | Back alignment and structure |
|
| >pdb|2XT0|A Chain A, Dehalogenase Dppa From Plesiocystis Pacifica Sir-I Length = 297 | Back alignment and structure |
|
| >pdb|4F60|A Chain A, Crystal Structure Of Rhodococcus Rhodochrous Haloalkane Dehalogenase Mutant (t148l, G171q, A172v, C176f) Length = 299 | Back alignment and structure |
|
| >pdb|3A2L|A Chain A, Crystal Structure Of Dbja (Mutant Dbja Delta) Length = 309 | Back alignment and structure |
|
| >pdb|3AFI|E Chain E, Crystal Structure Of Dbja (His-Dbja) Length = 316 | Back alignment and structure |
|
| >pdb|3A2M|A Chain A, Crystal Structure Of Dbja (Wild Type Type I) Length = 312 | Back alignment and structure |
|
| >pdb|3FBW|A Chain A, Structure Of Rhodococcus Rhodochrous Haloalkane Dehalogenase Dhaa Mutant C176y Length = 299 | Back alignment and structure |
|
| >pdb|1BN6|A Chain A, Haloalkane Dehalogenase From A Rhodococcus Species Length = 294 | Back alignment and structure |
|
| >pdb|1CQW|A Chain A, Nai Cocrystallised With Haloalkane Dehalogenase From A Rhodococcus Species Length = 295 | Back alignment and structure |
|
| >pdb|3FWH|A Chain A, Structure Of Haloalkane Dehalogenase Mutant Dha15 (I135fC176Y) FROM Rhodococcus Rhodochrous Length = 299 | Back alignment and structure |
|
| >pdb|4FWB|A Chain A, Structure Of Rhodococcus Rhodochrous Haloalkane Dehalogenase Mutant Dhaa31 In Complex With 1, 2, 3 - Trichloropropane Length = 292 | Back alignment and structure |
|
| >pdb|3RK4|A Chain A, Structure Of Rhodococcus Rhodochrous Haloalkane Dehalogenase Mutant Dhaa31 Length = 299 | Back alignment and structure |
|
| >pdb|3G9X|A Chain A, Structure Of Haloalkane Dehalogenase Dhaa14 Mutant I135f From Rhodococcus Rhodochrous Length = 299 | Back alignment and structure |
|
| >pdb|4F5Z|A Chain A, Crystal Structure Of Rhodococcus Rhodochrous Haloalkane Dehalogenase Mutant (l95v, A172v) Length = 299 | Back alignment and structure |
|
| >pdb|3SK0|A Chain A, Structure Of Rhodococcus Rhodochrous Haloalkane Dehalogenase Dhaa Mutant Dhaa12 Length = 311 | Back alignment and structure |
|
| >pdb|2V9Z|A Chain A, Structure Of The Rhodococcus Haloalkane Dehalogenase Mutant With Enhanced Enantioselectivity Length = 304 | Back alignment and structure |
|
| >pdb|3U1T|A Chain A, Haloalkane Dehalogenase, Dmma, Of Marine Microbial Origin Length = 309 | Back alignment and structure |
|
| >pdb|2QVB|A Chain A, Crystal Structure Of Haloalkane Dehalogenase Rv2579 From Mycobacterium Tuberculosis Length = 297 | Back alignment and structure |
|
| >pdb|2O2H|A Chain A, Crystal Structure Of Haloalkane Dehalogenase Rv2579 From Mycobacterium Tuberculosis Complexed With 1,2-Dichloroethane Length = 300 | Back alignment and structure |
|
| >pdb|3KXP|A Chain A, Crystal Structure Of E-2-(Acetamidomethylene)succinate Hydrolase Length = 314 | Back alignment and structure |
|
| >pdb|1IZ7|A Chain A, Re-Refinement Of The Structure Of Hydrolytic Haloalkane Dehalogenase Linb From Sphingomonas Paucimobilis Ut26 At 1.6 A Resolution Length = 295 | Back alignment and structure |
|
| >pdb|1G5F|A Chain A, Structure Of Linb Complexed With 1,2-Dichloroethane Length = 296 | Back alignment and structure |
|
| >pdb|1MJ5|A Chain A, Linb (Haloalkane Dehalogenase) From Sphingomonas Paucimobilis Ut26 At Atomic Resolution Length = 302 | Back alignment and structure |
|
| >pdb|1CV2|A Chain A, Hydrolytic Haloalkane Dehalogenase Linb From Sphingomonas Paucimobilis Ut26 At 1.6 A Resolution Length = 296 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >1b6g_A Haloalkane dehalogenase; hydrolase, alpha/beta-hydrolase; 1.15A {Xanthobacter autotrophicus} SCOP: c.69.1.8 PDB: 1be0_A 1cij_A 2yxp_X 1edd_A 1edb_A 2dhc_A 2dhe_A 2eda_A 2edc_A 2had_A 1ede_A 2pky_X 1bez_A 1bee_A 2dhd_A* 1hde_A Length = 310 | Back alignment and structure |
|---|
Score = 208 bits (532), Expect = 2e-66
Identities = 74/280 (26%), Positives = 125/280 (44%), Gaps = 19/280 (6%)
Query: 22 RWFVRETGSADSRLGTIVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGFGFSDKPEK 81
R + G++D+ + LHG P+ SY YR ++ +++G APD+ GFG SDKP
Sbjct: 35 RAHYLDEGNSDAED-VFLCLHGEPTWSYLYRKMIPVFAESGARVIAPDFFGFGKSDKPV- 92
Query: 82 GYDDFDFTENEFHEELDKLLDVLEVKYPFFLVVQGFLVGSYGLTWALKNPSRISKLAILN 141
D+ D+T L L++ L+++ LVVQ + G GLT + +PSR +L I+N
Sbjct: 93 --DEEDYTFEFHRNFLLALIERLDLR-NITLVVQDW-GGFLGLTLPMADPSRFKRLIIMN 148
Query: 142 SPL-TASSPLPGLFQQLRIPLLG------EFTAQNAIMAERFIEAGSPYVLKLDKADVYR 194
+ L T P + P G + + + ++F++ +P + + + + Y
Sbjct: 149 AXLMTDPVTQPAFSAFVTQPADGFTAWKYDLVTPSDLRLDQFMKRWAPTLTEAEAS-AYA 207
Query: 195 LPYLASSGPG----FALLEAARKVNFKDISSRIGAGFSSGSWDKPVLVAWGISDKYLPQS 250
P+ +S F + A R DIS+ F W+ +A G+ DK L
Sbjct: 208 APFPDTSYQAGVRKFPKMVAQRDQAXIDISTEA-ISFWQNDWNGQTFMAIGMKDKLLGPD 266
Query: 251 VAEEFQKGNPNVVKLQMIEGAGHMPQEDWPEKVVDGLRYF 290
V + + I AGH QE + + L++F
Sbjct: 267 VMYPMKALINGCPEPLEIADAGHFVQEFGEQVAREALKHF 306
|
| >2qvb_A Haloalkane dehalogenase 3; RV2579, alpha-beta hydrolase protei structural genomics consortium, TBSGC, hydrolase; 1.19A {Mycobacterium tuberculosis} PDB: 2o2i_A 2o2h_A Length = 297 | Back alignment and structure |
|---|
Score = 169 bits (430), Expect = 3e-51
Identities = 61/290 (21%), Positives = 108/290 (37%), Gaps = 25/290 (8%)
Query: 15 YIKSGEYRWFVRETGSADSRLGTIVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGFG 74
Y++ R + G D IVF HG P+ SY +RN+M + A D +G G
Sbjct: 12 YLEIAGKRMAYIDEGKGD----AIVFQHGNPTSSYLWRNIMPHLEGL-GRLVACDLIGMG 66
Query: 75 FSDKPEKGYDDFDFTENEFHEELDKLLDVLEVKYPFFLVVQGFLVGSYGLTWALKNPSRI 134
SDK ++ E + L L D L++ LV+ + + G WA ++ R+
Sbjct: 67 ASDKLS-PSGPDRYSYGEQRDFLFALWDALDLGDHVVLVLHDWG-SALGFDWANQHRDRV 124
Query: 135 SKLAILNSPLTASS------PLPGLFQQLRIPLLGEFTAQNAIMAERFIEAGSPYVLKLD 188
+A + + +T + + G+FQ R P ++ I ER + L +
Sbjct: 125 QGIAFMEAIVTPMTWADWPPAVRGVFQGFRSPQGEPMALEHNIFVERVLPGAILRQLSDE 184
Query: 189 KADVYRLPYLASSGPGFALLEAARKV-------NFKDISSRIGAGFSSGSWDKPVLVAWG 241
+ + YR P++ L R + + + + D P L
Sbjct: 185 EMNHYRRPFVNGGEDRRPTLSWPRNLPIDGEPAEVVALVNEYRSWLE--ETDMPKLFINA 242
Query: 242 ISDKYLPQSVAEEFQKGNPNVVKLQMIEGAGHMPQEDWPEKVVDGLRYFF 291
+ ++ + PN ++ H QED PE++ + F
Sbjct: 243 EPGAIITGR-IRDYVRSWPNQT--EITVPGVHFVQEDSPEEIGAAIAQFV 289
|
| >3u1t_A DMMA haloalkane dehalogenase; alpha/beta-hydrolase, hydrolase; 2.20A {Unidentified} Length = 309 | Back alignment and structure |
|---|
Score = 167 bits (425), Expect = 3e-50
Identities = 66/295 (22%), Positives = 116/295 (39%), Gaps = 32/295 (10%)
Query: 15 YIKSGEYRWFVRETGSADSRLGTIVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGFG 74
++ + GS ++FLHG P+ SY +RN++ + AG+ APD +G G
Sbjct: 13 TVEVEGATIAYVDEGSGQ----PVLFLHGNPTSSYLWRNIIPYVVAAGYRAVAPDLIGMG 68
Query: 75 FSDKPEKGYDDFDFTENEFHEELDKLLDVLEVKYPFFLVVQGFLVGSY-GLTWALKNPSR 133
S KP+ Y D +D +D L + LV+ + GS G+ A NP R
Sbjct: 69 DSAKPDIEYRLQDHVAY-----MDGFIDALGLD-DMVLVIHDW--GSVIGMRHARLNPDR 120
Query: 134 ISKLAILNSPLTASSPLPGL----------FQQLRIPLLGEFTAQ--NAIMAERFIEAGS 181
++ +A + + + + P+P F+ LR +GE N + E G
Sbjct: 121 VAAVAFMEALVPPALPMPSYEAMGPQLGPLFRDLRTADVGEKMVLDGNFFVETILPEMGV 180
Query: 182 PYVLKLDKADVYRLPYLASSGPGFALLEAARKVNFKD-----ISSRIGAGFSSGSWDKPV 236
L + YR P+ + L+ R+V + + G + P
Sbjct: 181 VRSLSEAEMAAYRAPF-PTRQSRLPTLQWPREVPIGGEPAFAEAEVLKNGEWLMASPIPK 239
Query: 237 LVAWGISDKYLPQSVAEEFQKGNPNVVKLQMIEGAGHMPQEDWPEKVVDGLRYFF 291
L+ P+ V + + PN ++++ + H QED P + G+ +
Sbjct: 240 LLFHAEPGALAPKPVVDYLSENVPN-LEVRFVGAGTHFLQEDHPHLIGQGIADWL 293
|
| >3g9x_A Haloalkane dehalogenase; alpha/beta hydrolase, helical CAP domain, catalytic triad (A His272, Glu130), mutant, I135F, haloalkanes; 0.95A {Rhodococcus SP} PDB: 3fwh_A 3fbw_A 3rlt_A 3rk4_A 1bn6_A 1bn7_A 1cqw_A 2v9z_A Length = 299 | Back alignment and structure |
|---|
Score = 165 bits (419), Expect = 2e-49
Identities = 66/294 (22%), Positives = 105/294 (35%), Gaps = 36/294 (12%)
Query: 15 YIKSGEYRWFVRETGSADSRLGTIVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGFG 74
Y++ R + G D ++FLHG P+ SY +RN++ ++ C APD +G G
Sbjct: 14 YVEVLGERMHYVDVGPRDGT--PVLFLHGNPTSSYLWRNIIPHVAP-SHRCIAPDLIGMG 70
Query: 75 FSDKPEKGYDDFDFTENEFHEELDKLLDVLEVKYPFFLVVQGF--LVGSYGLTWALKNPS 132
SDKP+ Y D LD ++ L ++ LV+ + + G WA +NP
Sbjct: 71 KSDKPDLDYFFDDHVRY-----LDAFIEALGLE-EVVLVIHDWGSAL---GFHWAKRNPE 121
Query: 133 RISKLAILNSPLTA------SSPLPGLFQQLRIPLLG-EFTAQNAIMAERFIEAGSPYVL 185
R+ +A + FQ R +G E E + L
Sbjct: 122 RVKGIACMEFIRPFPTWDEWPEFARETFQAFRTADVGRELIIDQNAFIEGALPKCVVRPL 181
Query: 186 KLDKADVYRLPYLASSGPGF--ALLEAARKV-------NFKDISSRIGAGFSSGSWDKPV 236
+ D YR P+ P L ++ N + P
Sbjct: 182 TEVEMDHYREPF---LKPVDREPLWRFPNELPIAGEPANIVALVEAYMNWL--HQSPVPK 236
Query: 237 LVAWGISDKYLPQSVAEEFQKGNPNVVKLQMIEGAGHMPQEDWPEKVVDGLRYF 290
L+ WG +P + A + PN K I H QED P+ + + +
Sbjct: 237 LLFWGTPGVLIPPAEAARLAESLPN-CKTVDIGPGLHYLQEDNPDLIGSEIARW 289
|
| >2xt0_A Haloalkane dehalogenase; hydrolase, alpha-beta hydrolase fold; 1.90A {Plesiocystis pacifica} Length = 297 | Back alignment and structure |
|---|
Score = 164 bits (417), Expect = 3e-49
Identities = 70/278 (25%), Positives = 102/278 (36%), Gaps = 25/278 (8%)
Query: 22 RWFVRETGSADSRLGTIVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGFGFSDKPEK 81
R + G D+ T + LHG PS S+ YR ++ + AG APD GFG SDKP
Sbjct: 34 RMHYVDEGPRDAEH-TFLCLHGEPSWSFLYRKMLPVFTAAGGRVVAPDLFGFGRSDKPT- 91
Query: 82 GYDDFDFTENEFHEELDKLLDVLEVKYPFFLVVQGFLVGSYGLTWALKNPSRISKLAILN 141
DD +T L LD L+++ LV Q + G GLT + P + +L ++N
Sbjct: 92 --DDAVYTFGFHRRSLLAFLDALQLE-RVTLVCQDWG-GILGLTLPVDRPQLVDRLIVMN 147
Query: 142 SPLTASSPLPGLFQQLRIPLLGEFTAQNAIMAERFIEAGSPYVLK---------LDKADV 192
+ L F+ R + + +R I + + KA V
Sbjct: 148 TALAVGLSPGKGFESWRDFVANSPDLDVGKLMQRAIPGITDAEVAAYDAPFPGPEFKAGV 207
Query: 193 YRLPYLASSGPGFALLEAARKVNFKDISSRIGAGFSSGSWDKPVLVAWGISDKYLPQSVA 252
R P + P E R+ F S W P +A G D L V
Sbjct: 208 RRFPAIVPITPDMEGAEIGRQA----------MSFWSTQWSGPTFMAVGAQDPVLGPEVM 257
Query: 253 EEFQKGNPNVVKLQMIEGAGHMPQEDWPEKVVDGLRYF 290
++ + ++E GH QE L F
Sbjct: 258 GMLRQAIRGCPEPMIVEAGGHFVQEHGEPIARAALAAF 295
|
| >3afi_E Haloalkane dehalogenase; A/B-hydrolase, hydrolase; 1.75A {Bradyrhizobium japonicum} PDB: 3a2m_A* 3a2n_A 3a2l_A* Length = 316 | Back alignment and structure |
|---|
Score = 160 bits (407), Expect = 2e-47
Identities = 66/303 (21%), Positives = 107/303 (35%), Gaps = 43/303 (14%)
Query: 15 YIKSGEYRWFVRETGSADSRLGTIVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGFG 74
RETG+ D+ ++FLHG P+ S+ +RN++ +S HC APD +GFG
Sbjct: 11 RAPVLGSSMAYRETGAQDAP--VVLFLHGNPTSSHIWRNILPLVSP-VAHCIAPDLIGFG 67
Query: 75 FSDKPEKGYDDFDFTENEFHEELDKLLDVLEVKYPFFLVVQ--GFLVGSYGLTWALKNPS 132
S KP+ Y FD LD ++ V +LV Q G + A + P
Sbjct: 68 QSGKPDIAYRFFDHVRY-----LDAFIEQRGVT-SAYLVAQDWGTAL---AFHLAARRPD 118
Query: 133 RISKLAILNSPL-----------------TASSPLPGLFQQLRIPLLGEFT-AQNAIMAE 174
+ LA + + +F++ R P GE + E
Sbjct: 119 FVRGLAFMEFIRPMPTWQDFHHTEVAEEQDHAEAARAVFRKFRTPGEGEAMILEANAFVE 178
Query: 175 RFIEAGSPYVLKLDKADVYRLPYLASSGPGF--ALLEAARKVNFKDISSRIGAGFSS--- 229
R + G L ++ YR P+ P +L R++ + + S
Sbjct: 179 RVLPGGIVRKLGDEEMAPYRTPF---PTPESRRPVLAFPRELPIAGEPADVYEALQSAHA 235
Query: 230 --GSWDKPVLVAWGISDKYLPQSVAEEFQKGNPNVVKLQMIEGAGHMPQEDWPEKVVDGL 287
+ P L+ G + AE F L + H QED + + +
Sbjct: 236 ALAASSYPKLLFTGEPGALVSPEFAERFAASLTR-CALIRLGAGLHYLQEDHADAIGRSV 294
Query: 288 RYF 290
+
Sbjct: 295 AGW 297
|
| >1mj5_A 1,3,4,6-tetrachloro-1,4-cyclohexadiene hydrolase; LINB, haloalkane dehalogenase, 1, 3, 4, 4-cyclohexadiene dehalogenase; 0.95A {Sphingomonas paucimobilis} SCOP: c.69.1.8 PDB: 1cv2_A 1d07_A 2bfn_A 1g42_A* 1g4h_A* 1g5f_A* 1iz7_A 1iz8_A* 1k5p_A 1k63_A 1k6e_A Length = 302 | Back alignment and structure |
|---|
Score = 158 bits (400), Expect = 1e-46
Identities = 63/290 (21%), Positives = 105/290 (36%), Gaps = 25/290 (8%)
Query: 15 YIKSGEYRWFVRETGSADSRLGTIVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGFG 74
+I+ R + G+ D I+F HG P+ SY +RN+M + G A D +G G
Sbjct: 13 FIEIKGRRMAYIDEGTGD----PILFQHGNPTSSYLWRNIMPHCAGLG-RLIACDLIGMG 67
Query: 75 FSDKPEKGYDDFDFTENEFHEELDKLLDVLEVKYPFFLVVQGFLVGSYGLTWALKNPSRI 134
SDK + + E + LD L + L++ LVV + + G WA ++ R+
Sbjct: 68 DSDKLD-PSGPERYAYAEHRDYLDALWEALDLGDRVVLVVHDWG-SALGFDWARRHRERV 125
Query: 135 SKLAILNSPLTASS------PLPGLFQQLRIPLLGEFTAQNAIMAERFIEAGSPYVLKLD 188
+A + + LFQ R E Q+ + E+ + L
Sbjct: 126 QGIAYMEAIAMPIEWADFPEQDRDLFQAFRSQAGEELVLQDNVFVEQVLPGLILRPLSEA 185
Query: 189 KADVYRLPYLASSGPGFALLEAARKVNFK-------DISSRIGAGFSSGSWDKPVLVAWG 241
+ YR P+LA+ L R++ I+ P L
Sbjct: 186 EMAAYREPFLAAGEARRPTLSWPRQIPIAGTPADVVAIARDYAGWL--SESPIPKLFINA 243
Query: 242 ISDKYLPQSVAEEFQKGNPNVVKLQMIEGAGHMPQEDWPEKVVDGLRYFF 291
L +F + PN ++ H QED P+++ + F
Sbjct: 244 EPG-ALTTGRMRDFCRTWPNQT--EITVAGAHFIQEDSPDEIGAAIAAFV 290
|
| >2psd_A Renilla-luciferin 2-monooxygenase; alpha/beta-hydrolase, luciferase, oxidoreductase; 1.40A {Renilla reniformis} PDB: 2pse_A 2psj_A* 2psh_A 2psf_A Length = 318 | Back alignment and structure |
|---|
Score = 149 bits (378), Expect = 3e-43
Identities = 44/291 (15%), Positives = 97/291 (33%), Gaps = 27/291 (9%)
Query: 15 YIKSGEYRWFVRETGSADSRLGTIVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGFG 74
+ + ++ ++FLHG + SY +R+V+ + C PD +G G
Sbjct: 25 QMNVLDSFINYYDSEKHAEN--AVIFLHGNATSSYLWRHVVPHIEP-VARCIIPDLIGMG 81
Query: 75 FSDKPEKGYDDFDFTENEFHEELDKLLDVLEVKYPFFLVVQGFLVGSYGLTWALKNPSRI 134
S K + + + ++ L ++L + V + + +A ++ RI
Sbjct: 82 KSGKS----GNGSYRLLDHYKYLTAWFELLNLPKKIIFVGHDWG-AALAFHYAYEHQDRI 136
Query: 135 SKLAILNSPLTASS------PLPGLFQQLRIPLLGEFTAQNAIMAERFIEAGSPYVLKLD 188
+ + S + + ++ + +N E + + L+ +
Sbjct: 137 KAIVHMESVVDVIESWDEWPDIEEDIALIKSEEGEKMVLENNFFVETVLPSKIMRKLEPE 196
Query: 189 KADVYRLPYLASSGPGFALLEAARKV--------NFKDISSRIGAGFSSGSWDKPVLVAW 240
+ Y P+ L R++ + I A + +
Sbjct: 197 EFAAYLEPFKEKGEVRRPTLSWPREIPLVKGGKPDVVQIVRNYNAYL---RASDDLPKLF 253
Query: 241 GISDKYLPQSVAEEFQKGNPNVVKLQMIEGAGHMPQEDWPEKVVDGLRYFF 291
SD + E K PN + ++G H QED P+++ ++ F
Sbjct: 254 IESDPGFFSNAIVEGAKKFPN-TEFVKVKG-LHFLQEDAPDEMGKYIKSFV 302
|
| >1c4x_A BPHD, protein (2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoat hydrolase); PCB degradation; 2.40A {Rhodococcus SP} SCOP: c.69.1.10 Length = 285 | Back alignment and structure |
|---|
Score = 130 bits (330), Expect = 2e-36
Identities = 51/288 (17%), Positives = 101/288 (35%), Gaps = 27/288 (9%)
Query: 15 YIKSGEYRWFVRETGSADSRLGTIVFLHGAPSHSYSYRNVMSQMSD--AGFHCFAPDWLG 72
SG G S +V LHGA +++ N + D F APD +G
Sbjct: 11 RFPSGTLASHALVAGDPQSP--AVVLLHGAGPGAHAASNWRPIIPDLAENFFVVAPDLIG 68
Query: 73 FGFSDKPEKGYDDFDFTENEFHEELDKLLDVLEVKYPFFLVVQGFLVG-SYG----LTWA 127
FG S+ PE E++ L++ ++ + +VG S G L
Sbjct: 69 FGQSEYPETYPGHIMSWVGMRVEQILGLMNHFGIE-------KSHIVGNSMGGAVTLQLV 121
Query: 128 LKNPSRISKLAILNSPLTASSPLPGLFQQLRIPLLGEFTAQNAIMAERFIEAGSPYVLKL 187
++ P R K+A++ S + P +L + +
Sbjct: 122 VEAPERFDKVALMGSVGAPMNARPPELARLL-AFYADPRLTPYRELIHSFVYDPENFPGM 180
Query: 188 DKADVYRLPYLASSGPGFALLEAARKVNFKDISSRIGAGFSSGSW----DKPVLVAWGIS 243
+ ++ + + ++ P ++V F+ + + + + + VLV G
Sbjct: 181 E--EIVKSRFEVANDPEVR---RIQEVMFESMKAGMESLVIPPATLGRLPHDVLVFHGRQ 235
Query: 244 DKYLPQSVAEEFQKGNPNVVKLQMIEGAGHMPQEDWPEKVVDGLRYFF 291
D+ +P + K + +L +++ GH Q + + + L F
Sbjct: 236 DRIVPLDTSLYLTKHLKH-AELVVLDRCGHWAQLERWDAMGPMLMEHF 282
|
| >2wue_A 2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoate hydrolase BPHD; HET: KEK; 1.80A {Mycobacterium tuberculosis} PDB: 2wud_A* 2wuf_A* 2wug_A* 2vf2_A Length = 291 | Back alignment and structure |
|---|
Score = 128 bits (325), Expect = 1e-35
Identities = 64/286 (22%), Positives = 99/286 (34%), Gaps = 33/286 (11%)
Query: 19 GEYRWFVRETGSADSRLGTIVFLHGAPSHSYSYRNVMSQMSD--AGFHCFAPDWLGFGFS 76
G + E G + + T+V LHG + S+ N ++ FH A D G+G S
Sbjct: 22 GPLKLHYHEAGVGNDQ--TVVLLHGGGPGAASWTNFSRNIAVLARHFHVLAVDQPGYGHS 79
Query: 77 DKPEKGYDDFDFTENEFHEELDKLLDVLEVKYPFFLVVQGFLVGSYG----LTWALKNPS 132
DK + + L L D L + LV + G + +AL P+
Sbjct: 80 DKRAEHGQFNRY----AAMALKGLFDQLGLG-RVPLVGN-----ALGGGTAVRFALDYPA 129
Query: 133 RISKLAILNSPLTASSPLPGLFQQLRIPLLGEFTAQNAIMAERFIEAGSPYVLKLDKADV 192
R +L +L P S L + L +F+ Y L ++
Sbjct: 130 RAGRL-VLMGPGGLSINLFAPDPTEGVKRLSKFSVAPTRENLEAFLRVMVYDKNLITPEL 188
Query: 193 YRLPYLASSGPGFALLEAARKVNFKDISSRIGAGFSSGSWDK-------PVLVAWGISDK 245
+ +S P L A R + S GA F +G + PVL+ WG D+
Sbjct: 189 VDQRFALASTPES--LTATRAM----GKSFAGADFEAGMMWREVYRLRQPVLLIWGREDR 242
Query: 246 YLPQSVAEEFQKGNPNVVKLQMIEGAGHMPQEDWPEKVVDGLRYFF 291
P A K P +L + GH Q + ++ F
Sbjct: 243 VNPLDGALVALKTIPR-AQLHVFGQCGHWVQVEKFDEFNKLTIEFL 287
|
| >1j1i_A META cleavage compound hydrolase; carbazole degradation, META cleavage product hydrolase, histidine tagged protein, alpha/beta-hydrolase; 1.86A {Janthinobacterium} SCOP: c.69.1.10 Length = 296 | Back alignment and structure |
|---|
Score = 122 bits (309), Expect = 3e-33
Identities = 49/288 (17%), Positives = 93/288 (32%), Gaps = 39/288 (13%)
Query: 15 YIKSGEYRWFVRETGSADSRLGTIVFLHGAPSHSYSYRNVMSQMSD--AGFHCFAPDWLG 72
++ +G E G ++ +HG + + S N + + + A D LG
Sbjct: 20 FVNAGGVETRYLEAGKGQ----PVILIHGGGAGAESEGNWRNVIPILARHYRVIAMDMLG 75
Query: 73 FGFSDKPEKGYDDFDFTENEFHEELDKLLDVLEVKYPFFLVVQGF-LVGSYGLTWALKNP 131
FG + KP+ Y L + + +V G + G+ GL ++ +
Sbjct: 76 FGKTAKPDIEYTQDRRI-----RHLHDFIKAMNFDGKVSIV--GNSMGGATGLGVSVLHS 128
Query: 132 SRISKLAILNSPLTASSPLPGLFQQLRIPLLGEFTAQNAIMAERFIEA--GSPYVLKLDK 189
++ L ++ S L P++ + + ++A + K+D
Sbjct: 129 ELVNALVLMGSAGLVVEIHEDLR-----PIINYDFTREGM--VHLVKALTNDGF--KIDD 179
Query: 190 ADVYRLPYLASSGPGFALLEAARKVNFKDISSRIGAGFSSGSWDK------PVLVAWGIS 243
A + Y ++ RK + G + P LV G
Sbjct: 180 AMINSR-YTYATDEA------TRKAYVATMQWIREQGGLFYDPEFIRKVQVPTLVVQGKD 232
Query: 244 DKYLPQSVAEEFQKGNPNVVKLQMIEGAGHMPQEDWPEKVVDGLRYFF 291
DK +P A +F + +I GH + PE + F
Sbjct: 233 DKVVPVETAYKFLDLIDD-SWGYIIPHCGHWAMIEHPEDFANATLSFL 279
|
| >1u2e_A 2-hydroxy-6-ketonona-2,4-dienedioic acid hydrolase; alpha/beta hydrolase fold; 2.10A {Escherichia coli} Length = 289 | Back alignment and structure |
|---|
Score = 121 bits (305), Expect = 7e-33
Identities = 51/288 (17%), Positives = 92/288 (31%), Gaps = 33/288 (11%)
Query: 16 IKSGEYRWFVRETGSADSRLGTIVFLHGAPSHSYSYRNVMSQM---SDAGFHCFAPDWLG 72
R + G D T+V LHG+ + + N + +AG+ D G
Sbjct: 20 EAGKTLRIHFNDCGQGD---ETVVLLHGSGPGATGWANFSRNIDPLVEAGYRVILLDCPG 76
Query: 73 FGFSDKPEKGYDDFDFTENEFHEELDKLLDVLEVKYPFFLVVQGFLVG-SYG----LTWA 127
+G SD D L ++D L++ + L+G S G + +
Sbjct: 77 WGKSDSVVNSGSRSDL----NARILKSVVDQLDIA-------KIHLLGNSMGGHSSVAFT 125
Query: 128 LKNPSRISKLAILNS---PLTASSPLPGLFQQLRIPLLGEFTAQNAIMAERFIEAGSPYV 184
LK P R+ KL ++ ++ +P+P + L + T +N + + +
Sbjct: 126 LKWPERVGKLVLMGGGTGGMSLFTPMPTEGIKRLNQLYRQPTIENLKLMMDIFVFDTSDL 185
Query: 185 LKLDKADVYRLPYLASSG-PGFALLEAARKVNFKDISSRIGAGFSSGSWDKPVLVAWGIS 243
F A F D R+ L+ WG +
Sbjct: 186 TDALFEARLNNMLSRRDHLENFVKSLEANPKQFPDFGPRLAEI------KAQTLIVWGRN 239
Query: 244 DKYLPQSVAEEFQKGNPNVVKLQMIEGAGHMPQEDWPEKVVDGLRYFF 291
D+++P G +L + GH Q + + + F
Sbjct: 240 DRFVPMDAGLRLLSGIAG-SELHIFRDCGHWAQWEHADAFNQLVLNFL 286
|
| >1iup_A META-cleavage product hydrolase; aromatic compounds, cumene, isopropylbenzene, META-cleavage compound hydrolase; 1.60A {Pseudomonas fluorescens} SCOP: c.69.1.10 PDB: 1iun_A 1iuo_A 1uk6_A 1uk7_A 1uk8_A 1uk9_A 1uka_A 1ukb_A 2d0d_A Length = 282 | Back alignment and structure |
|---|
Score = 120 bits (304), Expect = 9e-33
Identities = 56/297 (18%), Positives = 118/297 (39%), Gaps = 47/297 (15%)
Query: 11 EYGSYIKSGEYRWFVRETGSADSRLGTIVFLHGAPSHSYSYRNVMSQMSD--AGFHCFAP 68
E G I + + G ++ +HG+ +Y N + + AP
Sbjct: 5 EIGKSILAAGVLTNYHDVGEGQ----PVILIHGSGPGVSAYANWRLTIPALSKFYRVIAP 60
Query: 69 DWLGFGFSDKPEKGYDDFDFTENEFHEELDKLLDVLEVKYPFFLVVQGFLVG-SYG---- 123
D +GFGF+D+P ++++++++ + + + ++D LE++ + +VG ++G
Sbjct: 61 DMVGFGFTDRP----ENYNYSKDSWVDHIIGIMDALEIE-------KAHIVGNAFGGGLA 109
Query: 124 LTWALKNPSRISKLAILNSPLTASSPLPGLFQQLRIPLLGEFTAQNAIMAERFIEAGSPY 183
+ AL+ R+ ++ ++ + T GL + +T M ++
Sbjct: 110 IATALRYSERVDRMVLMGAAGTRFDVTEGL------NAVWGYTPSIENM-RNLLDI---- 158
Query: 184 VLKLDKA----DVYRLPYLASSGPGFALLEAARKVNFKDISSRIGAGFSSGSWD-----K 234
D++ ++ RL Y AS PGF E+ + F + R +S D
Sbjct: 159 -FAYDRSLVTDELARLRYEASIQPGF--QESFSSM-FPEPRQRWIDALASSDEDIKTLPN 214
Query: 235 PVLVAWGISDKYLPQSVAEEFQKGNPNVVKLQMIEGAGHMPQEDWPEKVVDGLRYFF 291
L+ G D+ +P S + + +L + GH Q + ++ + FF
Sbjct: 215 ETLIIHGREDQVVPLSSSLRLGELIDR-AQLHVFGRCGHWTQIEQTDRFNRLVVEFF 270
|
| >3oos_A Alpha/beta hydrolase family protein; APC67239.0, protein structure initiative, PSI-2, structural midwest center for structural genomics, MCSG; HET: MSE PG4; 1.65A {Bacillus anthracis} Length = 278 | Back alignment and structure |
|---|
Score = 119 bits (300), Expect = 3e-32
Identities = 40/290 (13%), Positives = 87/290 (30%), Gaps = 33/290 (11%)
Query: 15 YIKSGEYRWFVRETGSADSRLGTIVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGFG 74
IK+ ++ G + H ++ + + +D + + + G G
Sbjct: 7 IIKTPRGKFEYFLKGEGP----PLCVTHLYSEYNDNGNTFANPFTD-HYSVYLVNLKGCG 61
Query: 75 FSDKPEKGYDDFDFTENEFHEELDKLLDVLEVKYPFFLVVQGFLVG-SYG----LTWALK 129
SD + +D +++ E ++L+ + + L + + G S G L +A +
Sbjct: 62 NSDSAK---NDSEYSMTETIKDLEAIREALYIN-------KWGFAGHSAGGMLALVYATE 111
Query: 130 NPSRISKLAILNSPLTASSPLPGLFQQLRIPLLGEFTAQNAIMAERFIEAGSPYVLKLDK 189
++K+ + + AS + +F +IM + + +
Sbjct: 112 AQESLTKIIVGGAA--ASKEYASHKDSIYCSKNVKFNRIVSIM-NALNDDSTVQEERKAL 168
Query: 190 ADVYRLPYLASSGPGFALLEAARKVNFKDISSRIGAGFSSGSWD---------KPVLVAW 240
+ + L S L+ +D P +
Sbjct: 169 SREWALMSFYSEEKLEEALKLPNSGKTVGNRLNYFRQVEYKDYDVRQKLKFVKIPSFIYC 228
Query: 241 GISDKYLPQSVAEEFQKGNPNVVKLQMIEGAGHMPQEDWPEKVVDGLRYF 290
G D P + E PN L E + H P + +K +
Sbjct: 229 GKHDVQCPYIFSCEIANLIPNA-TLTKFEESNHNPFVEEIDKFNQFVNDT 277
|
| >4f0j_A Probable hydrolytic enzyme; alpha/beta hydrolase fold, structural genomics, joint center structural genomics, JCSG; HET: MSE; 1.50A {Pseudomonas aeruginosa} Length = 315 | Back alignment and structure |
|---|
Score = 118 bits (298), Expect = 1e-31
Identities = 47/283 (16%), Positives = 88/283 (31%), Gaps = 49/283 (17%)
Query: 37 TIVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGFGFSDKPE-KGYDDFDFTENEFHE 95
TI+ +HG + ++ + ++DAG+ A D +GF S KP Y N
Sbjct: 48 TILLMHGKNFCAGTWERTIDVLADAGYRVIAVDQVGFCKSSKPAHYQYSFQQLAAN---- 103
Query: 96 ELDKLLDVLEVKYPFFLVVQGFLVG-SYG----LTWALKNPSRISKLAILNSPLTASSPL 150
LL+ L V + ++G S G +AL P ++ +L ++N
Sbjct: 104 -THALLERLGVA-------RASVIGHSMGGMLATRYALLYPRQVERLVLVNPIGLEDWKA 155
Query: 151 PGLFQQLRIPLLGEFTAQNAIMAERFIEAGSPY--VLKLDKADVYRLPYLASSGPGFALL 208
G+ + + Q + R + + Y + + ++ G G +
Sbjct: 156 LGVPWR-SVDDWYRRDLQTSAEGIRQYQQATYYAGEWRPEFDRWVQMQAGMYRGKGRESV 214
Query: 209 EAARKVNFK-----DISSRIGAGFSSGSWDKPVLVAWGISDKYLPQS------------- 250
+ + + + P L+ G D
Sbjct: 215 AWNSALTYDMIFTQPVVYELDR------LQMPTLLLIGEKDNTAIGKDAAPAELKARLGN 268
Query: 251 ---VAEEFQKGNPNVVKLQMIEGAGHMPQEDWPEKVVDGLRYF 290
+ ++ + P L GH PQ PE+ L
Sbjct: 269 YAQLGKDAARRIPQ-ATLVEFPDLGHTPQIQAPERFHQALLEG 310
|
| >3fsg_A Alpha/beta superfamily hydrolase; PF00561, MCSG, PSI, PSI-2, structural genomics, protein structure initiative, midwest for structural genomics; 2.00A {Oenococcus oeni} Length = 272 | Back alignment and structure |
|---|
Score = 117 bits (296), Expect = 1e-31
Identities = 40/261 (15%), Positives = 76/261 (29%), Gaps = 26/261 (9%)
Query: 37 TIVFLHGAPSHSYSYRNVMSQMSD-AGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHE 95
I+FLHG S +S+ + D G G SD D N
Sbjct: 23 PIIFLHGLSLDKQSTCLFFEPLSNVGQYQRIYLDLPGMGNSDPISPSTSD-----NVLET 77
Query: 96 ELDKLLDVLEVKYPFFLVVQGFLVGSYG----LTWALKNPSRISKLAILNSPLTASSPLP 151
++ + +++ + F L G SYG A + + + +TA
Sbjct: 78 LIEAIEEIIGAR-RFILY--GH---SYGGYLAQAIAFHLKDQTLGVFLTCPVITADHSKR 131
Query: 152 GLFQQLRIPLLGEFTAQNAIMAERFIEAGSPYVLKLDKA--DVYRLPYLASSGPGFALLE 209
+ + I +N F+ + ++ L+
Sbjct: 132 LTGKHINILEEDINPVENKEYFADFLSMNVIINNQAWHDYQNLIIPGLQKEDKTFIDQLQ 191
Query: 210 AARKVNFKDISSRIGAGFSSGSWDKPVLVAWGISDKYLPQSVAEEFQKGNPNVVKLQMIE 269
F++ I ++ P + G +D+ + + N N ++ ++
Sbjct: 192 NNYSFTFEEKLKNI-------NYQFPFKIMVGRNDQVVGYQEQLKLINHNEN-GEIVLLN 243
Query: 270 GAGHMPQEDWPEKVVDGLRYF 290
GH D E V F
Sbjct: 244 RTGHNLMIDQREAVGFHFDLF 264
|
| >1brt_A Bromoperoxidase A2; haloperoxidase, oxidoreductase, alpha/beta hydrolase fold, mutant M99T; 1.50A {Streptomyces aureofaciens} SCOP: c.69.1.12 PDB: 1bro_A 1a8u_A 1a7u_A Length = 277 | Back alignment and structure |
|---|
Score = 114 bits (287), Expect = 2e-30
Identities = 67/282 (23%), Positives = 109/282 (38%), Gaps = 36/282 (12%)
Query: 24 FVRETGSADSRLGTIVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGY 83
+ + G+ +V +HG P +S+ + + DAG+ D GFG S +P GY
Sbjct: 16 YYEDHGTGQ----PVVLIHGFPLSGHSWERQSAALLDAGYRVITYDRRGFGQSSQPTTGY 71
Query: 84 DDFDFTENEFHEELDKLLDVLEVKYPFFLVVQGFLVGSYGLTW--ALKNPSRISKLAILN 141
D F +L+ +L+ L+++ LV GF G+ + + +RI+K+A L
Sbjct: 72 DYDTFA-----ADLNTVLETLDLQ-DAVLV--GFSTGTGEVARYVSSYGTARIAKVAFLA 123
Query: 142 SPL-----TASSPLPGL----FQQLRIPLLGEFTAQNAIMAERFIEAGSPYVLKLDKADV 192
S T +P F + + + A F ++ + V
Sbjct: 124 SLEPFLLKTDDNPDGAAPQEFFDGIVAAVKADRYAFYTGFFNDFYNLDENLGTRISEEAV 183
Query: 193 YRLPYLASSGPGFALLEA--ARKVNFKDISSRIGAGFSSGSWDKPVLVAWGISDKYLP-Q 249
A+SG FA A +F+ RI D P L+ G D+ LP +
Sbjct: 184 RNSWNTAASGGFFAAAAAPTTWYTDFRADIPRI---------DVPALILHGTGDRTLPIE 234
Query: 250 SVAEEFQKGNPNVVKLQMIEGAGHMPQEDWPEKVVDGLRYFF 291
+ A F K P+ + +EGA H E+V L F
Sbjct: 235 NTARVFHKALPS-AEYVEVEGAPHGLLWTHAEEVNTALLAFL 275
|
| >2puj_A 2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoate hydrola; C-C bond hydrolase, hydrolase; HET: HPZ; 1.57A {Burkholderia xenovorans} PDB: 2pu7_A* 3v1m_A* 3v1l_A* 2puh_A* 3v1n_A* 3v1k_A* 2og1_A 2pu5_A 2rhw_A* 2rht_A* 2ri6_A Length = 286 | Back alignment and structure |
|---|
Score = 113 bits (286), Expect = 4e-30
Identities = 50/290 (17%), Positives = 97/290 (33%), Gaps = 36/290 (12%)
Query: 15 YIKSGEYRWFVRETGSADSRLGTIVFLHGAPSHSYSYRNVMSQMSD---AGFHCFAPDWL 71
++ E G+ + T++ LHG + + N + AG+ D
Sbjct: 17 EKGFSDFNIHYNEAGNGE----TVIMLHGGGPGAGGWSNYYRNVGPFVDAGYRVILKDSP 72
Query: 72 GFGFSDKPEKGYDDFDFTENEFHEELDKLLDVLEVKYPFFLVVQGFLVG-SYG----LTW 126
GF SD + L+D L++ + LVG + G L +
Sbjct: 73 GFNKSDAVVMDEQRGLV----NARAVKGLMDALDID-------RAHLVGNAMGGATALNF 121
Query: 127 ALKNPSRISKLAILNSPLTASSPLPGLFQQLRIPLLGEFTAQNAI-MAERFIE--AGSPY 183
AL+ P RI KL IL P + I LL + A+ + ++ ++
Sbjct: 122 ALEYPDRIGKL-ILMGPGGLGPSMFAPMPMEGIKLLFKLYAEPSYETLKQMLQVFLYDQS 180
Query: 184 VLKLDKADVYRLPYLASSGPGFALLEAARKVNFK--DISSRIGAGFSSGSWDKPVLVAWG 241
++ + L +A+K D+++R+G + WG
Sbjct: 181 LITEELLQGRWEAIQRQPEHLKNFLISAQKAPLSTWDVTARLGE------IKAKTFITWG 234
Query: 242 ISDKYLPQSVAEEFQKGNPNVVKLQMIEGAGHMPQEDWPEKVVDGLRYFF 291
D+++P + + +L + G Q + ++ + F
Sbjct: 235 RDDRFVPLDHGLKLLWNIDD-ARLHVFSKCGAWAQWEHADEFNRLVIDFL 283
|
| >1hkh_A Gamma lactamase; hydrolase, alpha/beta hydrolase, CO-factor free haloperoxidase,; 1.73A {Microbacterium} SCOP: c.69.1.12 PDB: 1hl7_A* Length = 279 | Back alignment and structure |
|---|
Score = 111 bits (280), Expect = 3e-29
Identities = 55/283 (19%), Positives = 95/283 (33%), Gaps = 36/283 (12%)
Query: 24 FVRETGSADSRLGTIVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGY 83
+ + GS +V +HG P +S+ ++ G+ D GFG S K GY
Sbjct: 16 YYEDQGSGQ----PVVLIHGYPLDGHSWERQTRELLAQGYRVITYDRRGFGGSSKVNTGY 71
Query: 84 DDFDFTENEFHEELDKLLDVLEVKYPFFLVVQ---GFLVGSYGLTWALKNPSRISKLAIL 140
D F +L +L+ L+++ LV + Y A R++KLA L
Sbjct: 72 DYDTFA-----ADLHTVLETLDLR-DVVLVGFSMGTGELARY---VARYGHERVAKLAFL 122
Query: 141 NSPLTASSPLPGLFQQLRIPLLGEFTAQNAIMAERFIEAGSPYVLKLDKAD--------- 191
S + + + A + LD+
Sbjct: 123 ASLEPFLVQRDDNPEGVPQEVFDGIEAAAKGDRFAWFTDFYKNFYNLDENLGSRISEQAV 182
Query: 192 --VYRLPYLASSGPGFALLEAARKVNFKDISSRIGAGFSSGSWDKPVLVAWGISDKYLP- 248
+ + ++ +A++ A +F+ + A KP L+ G D LP
Sbjct: 183 TGSWNVAIGSAPVAAYAVVPAWI-EDFRSDVEAVRA------AGKPTLILHGTKDNILPI 235
Query: 249 QSVAEEFQKGNPNVVKLQMIEGAGHMPQEDWPEKVVDGLRYFF 291
+ A F + P +EGA H ++V L+ F
Sbjct: 236 DATARRFHQAVPE-ADYVEVEGAPHGLLWTHADEVNAALKTFL 277
|
| >3vdx_A Designed 16NM tetrahedral protein CAGE containing bromoperoxidase BPO-A2 and matrix...; protein design, bionanotechnology; 3.00A {Streptomyces aureofaciens} PDB: 4d9j_A Length = 456 | Back alignment and structure |
|---|
Score = 114 bits (287), Expect = 3e-29
Identities = 67/285 (23%), Positives = 107/285 (37%), Gaps = 42/285 (14%)
Query: 24 FVRETGSADSRLGTIVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGY 83
+ + G+ +V +HG P +S+ + + DAG+ D GFG S +P GY
Sbjct: 17 YYEDHGTGV----PVVLIHGFPLSGHSWERQSAALLDAGYRVITYDRRGFGQSSQPTTGY 72
Query: 84 DDFDFTENEFHEELDKLLDVLEVKYPFFLVVQGFLVGSYG-----LTWALKNPSRISKLA 138
D F +L+ +L+ L+++ LV GF S G + +RI+ +A
Sbjct: 73 DYDTFA-----ADLNTVLETLDLQ-DAVLV--GF---SMGTGEVARYVSSYGTARIAAVA 121
Query: 139 ILNSPL-----TASSPLPGL----FQQLRIPLLGEFTAQNAIMAERFIEAGSPYVLKLDK 189
L S T +P F + + + A F ++ +
Sbjct: 122 FLASLEPFLLKTDDNPDGAAPQEFFDGIVAAVKADRYAFYTGFFNDFYNLDENLGTRISE 181
Query: 190 ADVYRLPYLASSGPGFALLEA--ARKVNFKDISSRIGAGFSSGSWDKPVLVAWGISDKYL 247
V A+SG FA A +F+ RI D P L+ G D+ L
Sbjct: 182 EAVRNSWNTAASGGFFAAAAAPTTWYTDFRADIPRI---------DVPALILHGTGDRTL 232
Query: 248 P-QSVAEEFQKGNPNVVKLQMIEGAGHMPQEDWPEKVVDGLRYFF 291
P ++ A F K P+ + +EGA H E+V L F
Sbjct: 233 PIENTARVFHKALPS-AEYVEVEGAPHGLLWTHAEEVNTALLAFL 276
|
| >3kxp_A Alpha-(N-acetylaminomethylene)succinic acid hydrolase; alpha/beta hydrolase, PLP degradation, E-2- (acetamidomethylene)succinate; 2.26A {Mesorhizobium loti} Length = 314 | Back alignment and structure |
|---|
Score = 111 bits (280), Expect = 6e-29
Identities = 60/280 (21%), Positives = 105/280 (37%), Gaps = 24/280 (8%)
Query: 15 YIKSGEYRWFVRETGSADSRLGTIVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGFG 74
+ G VRE GS ++F HG S+S + +M ++SD F A D G G
Sbjct: 52 RVDIGRITLNVREKGSGP----LMLFFHGITSNSAVFEPLMIRLSD-RFTTIAVDQRGHG 106
Query: 75 FSDKPEKGYDDFDFTENEFHEELDKLLDVLEVKYPFFLVVQGFLVGSY-GLTWALKNPSR 133
SDKPE GY+ D+ +++ L+ L LV G +G+ +T A K P
Sbjct: 107 LSDKPETGYEANDYA-----DDIAGLIRTLARG-HAILV--GHSLGARNSVTAAAKYPDL 158
Query: 134 ISKLAILNSP---LTASSPLPGLFQQLRIPLLGEFTAQNAIMAERFIEAGSPYVLKLDKA 190
+ + ++ T + L + A A +A R+ + + ++
Sbjct: 159 VRSVVAIDFTPYIETEALDALEARVNAGSQLFEDIKAVEAYLAGRYPNIPADAIRIRAES 218
Query: 191 DVYRLPYLASSGPGFALLEAARKVNFKDISSRIGAGFSSGSWDKPVLVAWGISDKYLPQS 250
+ A + + D+ KPVL+ G S K + +
Sbjct: 219 GYQPVDGGLRPLASSAAMAQTARGLRSDLVPAYRD------VTKPVLIVRGESSKLVSAA 272
Query: 251 VAEEFQKGNPNVVKLQMIEGAGHMPQEDWPEKVVDGLRYF 290
+ + P+ + + ++ GA H E PE + + F
Sbjct: 273 ALAKTSRLRPD-LPVVVVPGADHYVNEVSPEITLKAITNF 311
|
| >2xmz_A Hydrolase, alpha/beta hydrolase fold family; menaquinone biosynthesis, lyase; 1.94A {Staphylococcus aureus} Length = 269 | Back alignment and structure |
|---|
Score = 110 bits (276), Expect = 8e-29
Identities = 51/281 (18%), Positives = 93/281 (33%), Gaps = 35/281 (12%)
Query: 21 YRWFVRETGSADSRLGTIVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGFGFSDKPE 80
Y+++ + +VFLHG S S +Y N + + +D +H D G G
Sbjct: 6 YKFYEANVETNQ----VLVFLHGFLSDSRTYHNHIEKFTD-NYHVITIDLPGHGEDQSSM 60
Query: 81 KGYDDFDFTENEFHEELDKLLDVLEVKYPFFLVVQGFLVGSY-GLTWALKNPSRISKLAI 139
+FD LD++LD + K L G+ +G L +A+ IS L +
Sbjct: 61 DETWNFD----YITTLLDRILDKYKDK-SITLF--GYSMGGRVALYYAINGHIPISNLIL 113
Query: 140 LNSPLTASSPLPGLFQQLRIPLLGEFTAQNAIMAERFIEAGSPYVLKLDKADVYRLPYLA 199
++ L ++L A+ AG + + L
Sbjct: 114 ESTSPGIKEEANQLERRLVDDAR----------AKVLDIAGIELFVNDWEKLPLFQSQLE 163
Query: 200 SSGPGFALLEAARKVNFKDISSRIGAGFSSGS----WDK------PVLVAWGISDKYLPQ 249
+ R ++ + +G W + P L+ G D
Sbjct: 164 LPVEIQHQIRQQRLSQSPHKMAKALRDYGTGQMPNLWPRLKEIKVPTLILAGEYD-EKFV 222
Query: 250 SVAEEFQKGNPNVVKLQMIEGAGHMPQEDWPEKVVDGLRYF 290
+A++ PN K ++I GH + ++ + F
Sbjct: 223 QIAKKMANLIPN-SKCKLISATGHTIHVEDSDEFDTMILGF 262
|
| >2wj6_A 1H-3-hydroxy-4-oxoquinaldine 2,4-dioxygenase; oxidoreductase, alpha/beta hydrolase; HET: ZZ8 SRT; 2.00A {Arthrobacter nitroguajacolicus} PDB: 2wj4_A* 2wj3_A* 2wm2_A* Length = 276 | Back alignment and structure |
|---|
Score = 109 bits (274), Expect = 2e-28
Identities = 38/262 (14%), Positives = 82/262 (31%), Gaps = 28/262 (10%)
Query: 37 TIVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEE 96
I+ L G Y+ ++ ++ F P+W G G S + + ++
Sbjct: 29 AILLLPGWCHDHRVYKYLIQELDA-DFRVIVPNWRGHGLSPSEVPDFGYQEQV-----KD 82
Query: 97 LDKLLDVLEVKYPFFLVVQGFLVG-SYGLTWALK-----NPSRISKLAILNSPLTASSP- 149
++LD L V+ V S+G ++ P R + I++ + A P
Sbjct: 83 ALEILDQLGVE-------TFLPVSHSHGGWVLVELLEQAGPERAPRGIIMDWLMWAPKPD 135
Query: 150 LPGLFQQLRIPLLGEFTAQNAIMAERFIEAGSPYVLKLDKADVYRLPYLASSGPGFALLE 209
L+ P + V ++ Y G + +
Sbjct: 136 FAKSLTLLKDPERWREGTH-GLFDVWLDGHDEKRVRHHLLEEMADYGYDCWGRSGRVIED 194
Query: 210 AARKVNFKDISSRIGAGFSSGSWDKPVLVAWGISDKYLPQSVAEEFQKGNPNVVKLQMIE 269
A + ++ + +P+ + + + + +F + +P +
Sbjct: 195 AYGRN------GSPMQMMANLTKTRPIRHIFSQPTEPEYEKINSDFAEQHPW-FSYAKLG 247
Query: 270 GAGHMPQEDWPEKVVDGLRYFF 291
G H P D P++ +R F
Sbjct: 248 GPTHFPAIDVPDRAAVHIREFA 269
|
| >1a88_A Chloroperoxidase L; haloperoxidase, oxidoreductase; 1.90A {Streptomyces lividans} SCOP: c.69.1.12 Length = 275 | Back alignment and structure |
|---|
Score = 109 bits (274), Expect = 2e-28
Identities = 57/279 (20%), Positives = 96/279 (34%), Gaps = 30/279 (10%)
Query: 24 FVRETGSADSRLGTIVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGY 83
F ++ G D +VF HG P + + N M G+ A D G G SD+P G+
Sbjct: 12 FYKDWGPRDGL--PVVFHHGWPLSADDWDNQMLFFLSHGYRVIAHDRRGHGRSDQPSTGH 69
Query: 84 DDFDFTENEFHEELDKLLDVLEVKYPFFLVV---QGFLVGSYGLTWALKNPSRISKLAIL 140
D + ++ L + L+++ + G V Y A P R++K ++
Sbjct: 70 DMDTYA-----ADVAALTEALDLR-GAVHIGHSTGGGEVARY---VARAEPGRVAKAVLV 120
Query: 141 NSP---LTASSPLPG-----LFQQLRIPLLGEFTAQNAIMAERFIEAGSPYVLKLDKADV 192
++ + S P +F + R L + + + + +
Sbjct: 121 SAVPPVMVKSDTNPDGLPLEVFDEFRAALAANRAQFYIDVPSGPFYGFNREGATVSQGLI 180
Query: 193 YRLPYLASSGPGFALLEAARKVNFKDISSRIGAGFSSGSWDKPVLVAWGISDKYLP-QSV 251
G A E + D + + D PVLVA G D+ +P
Sbjct: 181 DHWWLQGMMGAANAHYECIAAFSETDFTDDLKR------IDVPVLVAHGTDDQVVPYADA 234
Query: 252 AEEFQKGNPNVVKLQMIEGAGHMPQEDWPEKVVDGLRYF 290
A + + N L+ EG H PE + L F
Sbjct: 235 APKSAELLAN-ATLKSYEGLPHGMLSTHPEVLNPDLLAF 272
|
| >3ibt_A 1H-3-hydroxy-4-oxoquinoline 2,4-dioxygenase; QDO, oxidoreductase; 2.60A {Pseudomonas putida} Length = 264 | Back alignment and structure |
|---|
Score = 108 bits (272), Expect = 3e-28
Identities = 47/285 (16%), Positives = 87/285 (30%), Gaps = 33/285 (11%)
Query: 15 YIKSGEYRWFVRETGSADSRLGTIVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGFG 74
+ E+G + T+ L G ++N+ ++ FH PDW G
Sbjct: 3 SLNVNGTLMTYSESGDPHAP--TLFLLSGWCQDHRLFKNLAPLLAR-DFHVICPDWRGHD 59
Query: 75 FSDKPEKGYDDFDFTENEFHEELDKLLDVLEVKYPFFLVVQGFLVGSYG----LTWALK- 129
+D ++L +D ++ F +V S+G + +
Sbjct: 60 AKQTDSGDFDSQTLA-----QDLLAFIDAKGIR-DFQMVST-----SHGCWVNIDVCEQL 108
Query: 130 NPSRISKLAILNSPLTASSPLPGLFQQLRIPLLGEFTAQ--NAIMAERFIEAGSPYVLKL 187
+R+ K I++ L P PG +QQL + E + VL
Sbjct: 109 GAARLPKTIIIDWLLQ---PHPGFWQQLAEGQHPTEYVAGRQSFFDEWAETTDNADVLNH 165
Query: 188 DKADVYRLPYLASSGPGFALLEAARKVNFKDISSRIGAGFSSGSWDKPVLVAWGISDKYL 247
+ ++ + R + R+ + KP +
Sbjct: 166 LRNEMPWFHGEMWQRACREIEANYR--TWGSPLDRMDSLP-----QKPEICHIYSQPLSQ 218
Query: 248 P-QSVAEEFQKGNPNVVKLQMIEGAGHMPQEDWPEKVVDGLRYFF 291
+ + EF G+ + I G H P + P V +R F
Sbjct: 219 DYRQLQLEFAAGHSW-FHPRHIPGRTHFPSLENPVAVAQAIREFL 262
|
| >3e0x_A Lipase-esterase related protein; APC60309, clostridium acetobutylicum ATCC 824, structural genomics, PSI-2; HET: MSE; 1.45A {Clostridium acetobutylicum} Length = 245 | Back alignment and structure |
|---|
Score = 105 bits (264), Expect = 2e-27
Identities = 40/255 (15%), Positives = 81/255 (31%), Gaps = 29/255 (11%)
Query: 37 TIVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEE 96
T++F+HG+ + + + + D ++C D G G S + + +N
Sbjct: 18 TLLFVHGSGCNLKIFGELEKYLED--YNCILLDLKGHGESKGQCP-STVYGYIDN-VANF 73
Query: 97 LDKLLDVLEVKYPFFLVVQGFLVGSY-GLTWALKNPSRISKLAILNSPLTASSPLPGLFQ 155
+ K L+ G+ +G L ALK + K+ L+ + L +
Sbjct: 74 ITNSEVTKHQK-NITLI--GYSMGGAIVLGVALKKLPNVRKVVSLSG----GARFDKLDK 126
Query: 156 QLRIPLLGEFTAQNAIMAERFIEAGSPYVLKLDKADVYRLPYLASSGPGFALLEAARKVN 215
+ N ++ I + ++ Y L A + ++
Sbjct: 127 DFMEKIYHNQLDNNYLLE--CIGGIDNPL-----SEKYFETLEKDPDIMINDLIACKLID 179
Query: 216 FKDISSRIGAGFSSGSWDKPVLVAWGISDKYLPQSVAEEFQKGNPNVVKLQMIEGAGHMP 275
D I D PV + +E +K N +L++ E H
Sbjct: 180 LVDNLKNI---------DIPVKAIVAKDELLTLVEYSEIIKKEVENS-ELKIFETGKHFL 229
Query: 276 QEDWPEKVVDGLRYF 290
+ V + ++ F
Sbjct: 230 LVVNAKGVAEEIKNF 244
|
| >2r11_A Carboxylesterase NP; 2632844, putative hydrolase, structural genomics, joint center for structural genomics, JCSG; HET: MSE PGE; 1.96A {Bacillus subtilis} Length = 306 | Back alignment and structure |
|---|
Score = 106 bits (267), Expect = 3e-27
Identities = 50/291 (17%), Positives = 98/291 (33%), Gaps = 49/291 (16%)
Query: 15 YIKSGEYRWFVRETGSADSRLGTIVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGFG 74
YI + + V +G D+ +V LHGA S + ++ S + + +A D +G
Sbjct: 49 YISTRFGQTHVIASGPEDAP--PLVLLHGALFSSTMWYPNIADWS-SKYRTYAVDIIGDK 105
Query: 75 FSDKPEKGYDDFDFTENEFHEELDKLLDVLEVKYPFFLVVQGFLVG-SYG----LTWALK 129
PE ++ L + D L ++ + ++G S G + + L+
Sbjct: 106 NKSIPENVSGTRT----DYANWLLDVFDNLGIE-------KSHMIGLSLGGLHTMNFLLR 154
Query: 130 NPSRISKLAILNSPLTASSPLPGLFQQLRI--------PLLGEFTAQNAIMAERFIEAGS 181
P R+ AIL+ T ++ L ++ F++
Sbjct: 155 MPERVKSAAILSPAETFLPFHHDFYKYALGLTASNGVETFLNWMMNDQNVLHPIFVKQFK 214
Query: 182 PYVLKLDKADVYRLPYLASSGPGFALLEAARKVNFKDISSRIGAGFSSGSWDKPVLVAWG 241
V+ D + + V + P+L+ G
Sbjct: 215 AGVMWQDGSRNPN-----------PNADGFPYVFTDEELRSARV---------PILLLLG 254
Query: 242 ISDK-YLPQSVAEEFQKGNPNVVKLQMIEGAGHMPQEDWPEKVVDGLRYFF 291
+ Y P S P+ ++ ++I+ AGH+ + P V + + FF
Sbjct: 255 EHEVIYDPHSALHRASSFVPD-IEAEVIKNAGHVLSMEQPTYVNERVMRFF 304
|
| >3fob_A Bromoperoxidase; structural genomics, IDP00046, bacillus ANT peroxidase, oxidoreductase; 1.74A {Bacillus anthracis str} Length = 281 | Back alignment and structure |
|---|
Score = 105 bits (265), Expect = 4e-27
Identities = 57/281 (20%), Positives = 105/281 (37%), Gaps = 36/281 (12%)
Query: 24 FVRETGSADSRLGTIVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGY 83
+ + G+ +V +HG P S+ + + +AG+ D GFG S +P +GY
Sbjct: 20 YYEDHGTGK----PVVLIHGWPLSGRSWEYQVPALVEAGYRVITYDRRGFGKSSQPWEGY 75
Query: 84 DDFDFTENEFHEELDKLLDVLEVKYPFF--LVVQGFLVGSYGLTWALKNPSRISKLAILN 141
+ FT +L +LL+ LE++ + G V Y + RI K+
Sbjct: 76 EYDTFT-----SDLHQLLEQLELQNVTLVGFSMGGGEVARY---ISTYGTDRIEKVVFAG 127
Query: 142 S--PL---TASSPLPGL----FQQLRIPLLGEFTAQNAIMAERFIEAGSPYVLKLDKADV 192
+ P + P L + + ++ + A + F AG L + +
Sbjct: 128 AVPPYLYKSEDHPEGALDDATIETFKSGVINDRLAFLDEFTKGFFAAGDRTDLVSESFRL 187
Query: 193 YRLPYLASSGPG--FALLEAARKVNFKDISSRIGAGFSSGSWDKPVLVAWGISDKYLPQS 250
Y A + P + A K +F+ + + P L+ G SD +P
Sbjct: 188 YNWDIAAGASPKGTLDCITAFSKTDFRKDLEKF---------NIPTLIIHGDSDATVPFE 238
Query: 251 VAEEFQ-KGNPNVVKLQMIEGAGHMPQEDWPEKVVDGLRYF 290
+ + + PN K+ +I+G H ++ + L F
Sbjct: 239 YSGKLTHEAIPN-SKVALIKGGPHGLNATHAKEFNEALLLF 278
|
| >1a8q_A Bromoperoxidase A1; haloperoxidase, oxidoreductase; 1.75A {Streptomyces aureofaciens} SCOP: c.69.1.12 Length = 274 | Back alignment and structure |
|---|
Score = 105 bits (264), Expect = 5e-27
Identities = 62/283 (21%), Positives = 109/283 (38%), Gaps = 39/283 (13%)
Query: 24 FVRETGSADSRLGTIVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGY 83
F ++ G +VF+HG P + ++++ + + DAG+ A D G G S GY
Sbjct: 12 FYKDWGQGR----PVVFIHGWPLNGDAWQDQLKAVVDAGYRGIAHDRRGHGHSTPVWDGY 67
Query: 84 DDFDFTENEFHEELDKLLDVLEVKYPFFLV---VQGFLVGSYGLTWALKNPSRISKLAIL 140
D F ++L+ LL L+++ LV + G + Y R+ +L
Sbjct: 68 DFDTFA-----DDLNDLLTDLDLR-DVTLVAHSMGGGELARY---VGRHGTGRLRSAVLL 118
Query: 141 NS---PLTASSPLPG-----LFQQLRIPLLGEFTAQNAIMAERFIEAGSPY-VLKLDKAD 191
++ + S P +F L+ +L E + AE F A P + D
Sbjct: 119 SAIPPVMIKSDKNPDGVPDEVFDALKNGVLTERSQFWKDTAEGFFSANRPGNKVTQGNKD 178
Query: 192 VYRLPYLASSGPGF-ALLEAARKVNFKDISSRIGAGFSSGSWDKPVLVAWGISDKYLP-Q 249
+ +A + G ++A +F + + D P LV G D+ +P
Sbjct: 179 AFWYMAMAQTIEGGVRCVDAFGYTDFTEDLKKF---------DIPTLVVHGDDDQVVPID 229
Query: 250 SVAEEFQKGNPNVVKLQMIEGAGHMPQ--EDWPEKVVDGLRYF 290
+ + + PN +L++ EG+ H EK L F
Sbjct: 230 ATGRKSAQIIPN-AELKVYEGSSHGIAMVPGDKEKFNRDLLEF 271
|
| >1a8s_A Chloroperoxidase F; haloperoxidase, oxidoreductase, propionate complex; 1.80A {Pseudomonas fluorescens} SCOP: c.69.1.12 Length = 273 | Back alignment and structure |
|---|
Score = 105 bits (263), Expect = 7e-27
Identities = 50/282 (17%), Positives = 101/282 (35%), Gaps = 38/282 (13%)
Query: 24 FVRETGSADSRLGTIVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGY 83
+ ++ GS IVF HG P ++ S+ + M ++ G+ A D G G S +P G
Sbjct: 12 YYKDWGSGQ----PIVFSHGWPLNADSWESQMIFLAAQGYRVIAHDRRGHGRSSQPWSGN 67
Query: 84 DDFDFTENEFHEELDKLLDVLEVKYPFFLVVQGFLVG-SYG-----LTWALKNPSRISKL 137
D + ++L +L++ L+++ L G S G +R++K
Sbjct: 68 DMDTYA-----DDLAQLIEHLDLR-------DAVLFGFSTGGGEVARYIGRHGTARVAKA 115
Query: 138 AILNS--PLTASSP------LPGLFQQLRIPLLGEFTAQNAIMAERFIEAGSPYVLKLDK 189
++++ PL + +F +R L + + +A + K
Sbjct: 116 GLISAVPPLMLKTEANPGGLPMEVFDGIRQASLADRSQLYKDLASGPFFGFNQPGAKSSA 175
Query: 190 ADVYRLPYLASSGPGFALLEAARKVNFKDISSRIGAGFSSGSWDKPVLVAWGISDKYLP- 248
V + + + + D + + D P LV G +D+ +P
Sbjct: 176 GMVDWFWLQGMAAGHKNAYDCIKAFSETDFTEDLKK------IDVPTLVVHGDADQVVPI 229
Query: 249 QSVAEEFQKGNPNVVKLQMIEGAGHMPQEDWPEKVVDGLRYF 290
++ L++ GA H + +++ L F
Sbjct: 230 EASGIASAALVKG-STLKIYSGAPHGLTDTHKDQLNADLLAF 270
|
| >3ia2_A Arylesterase; alpha-beta hydrolase fold, transition state analog, hydrolas oxidoreductase, peroxidase; 1.65A {Pseudomonas fluorescens} PDB: 1va4_A 3hi4_A 3hea_A Length = 271 | Back alignment and structure |
|---|
Score = 103 bits (259), Expect = 2e-26
Identities = 56/282 (19%), Positives = 109/282 (38%), Gaps = 40/282 (14%)
Query: 24 FVRETGSADSRLGTIVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGY 83
+ ++ GS ++F HG + + M +S G+ A D GFG SD+P G
Sbjct: 12 YFKDWGSGK----PVLFSHGWLLDADMWEYQMEYLSSRGYRTIAFDRRGFGRSDQPWTGN 67
Query: 84 DDFDFTENEFHEELDKLLDVLEVKYPFFLVVQGFLVGSYG-----LTWALKNPSRISKLA 138
D F +++ +L++ L++K LV GF S G A +R++ L
Sbjct: 68 DYDTFA-----DDIAQLIEHLDLK-EVTLV--GF---SMGGGDVARYIARHGSARVAGLV 116
Query: 139 ILNSPLTASSPLPGLFQQLRIPLLGEFTAQNAIMAERFIEAGSPYVLKLDKAD------- 191
+L + P Q + + + F + +FI + ++K
Sbjct: 117 LLGAVTPLFGQKPDYPQGVPLDVFARFKTELLKDRAQFISDFNAPFYGINKGQVVSQGVQ 176
Query: 192 --VYRLPYLASSGPGFALLEAARKVNFKDISSRIGAGFSSGSWDKPVLVAWGISDKYLP- 248
++ LAS + A + +F+ ++I D P LV G D+ +P
Sbjct: 177 TQTLQIALLASLKATVDCVTAFAETDFRPDMAKI---------DVPTLVIHGDGDQIVPF 227
Query: 249 QSVAEEFQKGNPNVVKLQMIEGAGHMPQEDWPEKVVDGLRYF 290
++ + + +L++ + A H +++ + L F
Sbjct: 228 ETTGKVAAELIKG-AELKVYKDAPHGFAVTHAQQLNEDLLAF 268
|
| >3nwo_A PIP, proline iminopeptidase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, mycobac smegmatis; 1.90A {Mycobacterium smegmatis} Length = 330 | Back alignment and structure |
|---|
Score = 100 bits (251), Expect = 8e-25
Identities = 61/299 (20%), Positives = 105/299 (35%), Gaps = 35/299 (11%)
Query: 15 YIKSGEYRWFVRETG--SADSRLGTIVFLHGAPSHSYSYRNVMSQMSD-AGFHCFAPDWL 71
+ G++ +V+ T +A ++ LHG P +++Y ++ ++D G D +
Sbjct: 32 TVPFGDHETWVQVTTPENAQPHALPLIVLHGGPGMAHNYVANIAALADETGRTVIHYDQV 91
Query: 72 GFGFSDKPEKGYDDFDFTENEFHEELDKLLDVLEVKYPFFLVVQGFLVGSYG----LTWA 127
G G S DF +T F +E + L ++ + ++ G S+G A
Sbjct: 92 GCGNSTHLPDAPADF-WTPQLFVDEFHAVCTALGIE-RYHVL--G---QSWGGMLGAEIA 144
Query: 128 LKNPSRISKLAILNSPLTASSPLPGLFQQLRIPLLGEFTAQNAIMAERFIEAGSPYVLKL 187
++ PS + LAI NSP AS L L T E P L+
Sbjct: 145 VRQPSGLVSLAICNSP--ASMRLWSEAAGDLRAQLPAETRAALDRHEAAGTITHPDYLQA 202
Query: 188 DKADVYRLPYLASSGPGFALLEAARKVNFKDISSRIGAGFSS-------GSWD------- 233
R P ++ ++ + G + G W
Sbjct: 203 AAEFYRRHVCRVVPTPQ-DFADSVAQMEAEPTVYHTMNGPNEFHVVGTLGDWSVIDRLPD 261
Query: 234 --KPVLVAWGISDKYLPQSVAEEFQKGNPNVVKLQMIEGAGHMPQEDWPEKVVDGLRYF 290
PVLV G D+ P+ + F P+V + + G H + PE+ + F
Sbjct: 262 VTAPVLVIAGEHDEATPK-TWQPFVDHIPDV-RSHVFPGTSHCTHLEKPEEFRAVVAQF 318
|
| >2ocg_A Valacyclovir hydrolase; alpha beta hydrolase fold; 1.75A {Homo sapiens} PDB: 2oci_A* 2ock_A 2ocl_A Length = 254 | Back alignment and structure |
|---|
Score = 98.9 bits (247), Expect = 1e-24
Identities = 45/282 (15%), Positives = 93/282 (32%), Gaps = 39/282 (13%)
Query: 15 YIKSGEYRWFVRETGSADSRLGTIVFLHGAP-SHSYSYRNVMSQMSDAGFHCFAPDWLGF 73
+ + ++TG D ++ L G S + + ++ F A D G+
Sbjct: 6 KVAVNGVQLHYQQTGEGD---HAVLLLPGMLGSGETDFGPQLKNLNKKLFTVVAWDPRGY 62
Query: 74 GFSDKPEKGYDDFDFTENEFHEELDKLLDVLEVKYPFFLVVQGFLVGSYG----LTWALK 129
G S P++ + F ++ L+ L+ K L+ G+ S G L A K
Sbjct: 63 GHSRPPDRDFPADFFER--DAKDAVDLMKALKFK-KVSLL--GW---SDGGITALIAAAK 114
Query: 130 NPSRISKLAILNSPLTASSPLPGLFQQLRIPLLGEFTAQNAIMAERFIEAGSPYVLKLDK 189
PS I K+ I + + +++ +R + +++ + E G Y + +
Sbjct: 115 YPSYIHKMVIWGANAYVTDEDSMIYEGIR--DVSKWSERTRKPLEALY--GYDYFARTCE 170
Query: 190 ADVYRLPYLASSGPGFALLEAARKVNFKDISSRIGAGFSSGSWDKPVLVAWGISDKYLPQ 249
V + + + R+ P L+ G D +P+
Sbjct: 171 KWVDGI---------RQFKHLPDGNICRHLLPRVQC---------PALIVHGEKDPLVPR 212
Query: 250 SVAEEFQKGNPNVVKLQMIEGAGHMPQEDWPEKVVDGLRYFF 291
A+ K +L ++ H + ++ F
Sbjct: 213 FHADFIHKHVKGS-RLHLMPEGKHNLHLRFADEFNKLAEDFL 253
|
| >1zoi_A Esterase; alpha/beta hydrolase fold; 1.60A {Pseudomonas putida} PDB: 4dgq_A Length = 276 | Back alignment and structure |
|---|
Score = 97.7 bits (244), Expect = 4e-24
Identities = 44/281 (15%), Positives = 92/281 (32%), Gaps = 34/281 (12%)
Query: 24 FVRETGSADSRLGTIVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGY 83
F ++ G D+ I F HG P + + + G+ A D G G S + G+
Sbjct: 13 FYKDWGPRDAP--VIHFHHGWPLSADDWDAQLLFFLAHGYRVVAHDRRGHGRSSQVWDGH 70
Query: 84 DDFDFTENEFHEELDKLLDVLEVKYPFFLVVQGFLVGSYG----LTWALKNPS-RISKLA 138
D + +++ ++ L ++ V G S G + + ++P +++K
Sbjct: 71 DMDHYA-----DDVAAVVAHLGIQ-GAVHV--GH---STGGGEVVRYMARHPEDKVAKAV 119
Query: 139 ILNS----PLTASSPLPGL----FQQLRIPLLGEFTAQNAIMAERFIEAGSPYVLKLDKA 190
++ + + GL F + + + + ++ +
Sbjct: 120 LIAAVPPLMVQTPGNPGGLPKSVFDGFQAQVASNRAQFYRDVPAGPFYGYNRPGVEASEG 179
Query: 191 DVYRLPYLASSGPGFALLEAARKVNFKDISSRIGAGFSSGSWDKPVLVAWGISDKYLPQS 250
+ G A + + D + + +PVLV G D+ +P
Sbjct: 180 IIGNWWRQGMIGSAKAHYDGIVAFSQTDFTEDLKG------IQQPVLVMHGDDDQIVPYE 233
Query: 251 VAEEFQ-KGNPNVVKLQMIEGAGHMPQEDWPEKVVDGLRYF 290
+ K PN L+ +G H + + L F
Sbjct: 234 NSGVLSAKLLPN-GALKTYKGYPHGMPTTHADVINADLLAF 273
|
| >1m33_A BIOH protein; alpha-betta-alpha sandwich, structural genomics, PSI, protei structure initiative; HET: MSE 3OH; 1.70A {Escherichia coli} SCOP: c.69.1.26 Length = 258 | Back alignment and structure |
|---|
Score = 96.9 bits (242), Expect = 5e-24
Identities = 47/275 (17%), Positives = 89/275 (32%), Gaps = 35/275 (12%)
Query: 24 FVRETGSADSRLGTIVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGY 83
+ + G + +V LHG ++ +R + ++S + F D GFG S G
Sbjct: 5 WWQTKGQGNV---HLVLLHGWGLNAEVWRCIDEELS-SHFTLHLVDLPGFGRSRGF--GA 58
Query: 84 DDFDFTENEFHEELDKLLDVLEVKYPFFLVVQGFLVGSY-GLTWALKNPSRISKLAILNS 142
++ + + + G+ +G AL +P R+ L + S
Sbjct: 59 LSLA--------DMAEAVLQQAPD-KAIWL--GWSLGGLVASQIALTHPERVRALVTVAS 107
Query: 143 --PLTASSPLPGLFQQLRIPLLGEFTAQNAIMAERFIE---AGSPYVLKLDKADVYRLPY 197
+A PG+ + + + ERF+ G+ + +A +
Sbjct: 108 SPCFSARDEWPGIKPDVLAGFQQQLSDDQQRTVERFLALQTMGTETARQDARALKKTVLA 167
Query: 198 LASSGPGFAL--LEAARKVNFKDISSRIGAGFSSGSWDKPVLVAWGISDKYLPQSVAEEF 255
L LE + V+ + + P L +G D +P+ V
Sbjct: 168 LPMPEVDVLNGGLEILKTVDLRQPLQNVSM---------PFLRLYGYLDGLVPRKVVPML 218
Query: 256 QKGNPNVVKLQMIEGAGHMPQEDWPEKVVDGLRYF 290
K P+ + + A H P P + L
Sbjct: 219 DKLWPHS-ESYIFAKAAHAPFISHPAEFCHLLVAL 252
|
| >3kda_A CFTR inhibitory factor (CIF); alpha/beta hydrolase, hydrolase; 1.50A {Pseudomonas aeruginosa ucbpp-pa14} PDB: 3kd2_A 3pi6_A Length = 301 | Back alignment and structure |
|---|
Score = 97.7 bits (244), Expect = 5e-24
Identities = 49/304 (16%), Positives = 95/304 (31%), Gaps = 53/304 (17%)
Query: 15 YIKSGEYRWFVRETGSADSRLGTIVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGFG 74
Y + + + G ++ +HG Y + +M +++ F APD G G
Sbjct: 14 YREVDGVKLHYVKGGQGP----LVMLVHGFGQTWYEWHQLMPELAK-RFTVIAPDLPGLG 68
Query: 75 FSDKPEKGYDDFDFTENEFHEELDKLLDVLEVKYPFFLVVQGFLVGSY-GLTWALKNPSR 133
S+ P+ GY L KL PF LV +G + +KN +
Sbjct: 69 QSEPPKTGYSGEQVA-----VYLHKLARQFSPDRPFDLV--AHDIGIWNTYPMVVKNQAD 121
Query: 134 ISKLAILNSPLTASSPLPGLFQQLRIPLLGE-------FTAQNAIMAERFIEAGSPYVLK 186
I++L + +P+ P +++ GE F A + +AE I
Sbjct: 122 IARLVYMEAPI----PDARIYRFPAFTAQGESLVWHFSFFAADDRLAETLIAG------- 170
Query: 187 LDKADVYRLPYLASSGPGFALLEAARKVNFKDISSRIG----------AGFSSGSWDK-- 234
+ + + E + + ++ A S +
Sbjct: 171 -KERFFLEHFIKSHASNTEVFSERLLDL-YARSYAKPHSLNASFEYYRALNESVRQNAEL 228
Query: 235 -------PVLVAWGISDKYLPQSVAEEFQKGNPNVVKLQMIEGAGHMPQEDWPEKVVDGL 287
P + G + E+ + + V+ ++ G GH E+ + +
Sbjct: 229 AKTRLQMPTMTLAGGGAGGMGTFQLEQMKAYAED-VEGHVLPGCGHWLPEECAAPMNRLV 287
Query: 288 RYFF 291
F
Sbjct: 288 IDFL 291
|
| >1mtz_A Proline iminopeptidase; alpha-beta hydrolase, CAP domain, caged active site, prolyl peptidase; 1.80A {Thermoplasma acidophilum} SCOP: c.69.1.7 PDB: 1mt3_A 1mu0_A* 1xrr_A 1xrq_A 1xro_A 1xrn_A 1xrm_A 1xrp_A 1xrl_A* 1xqw_A* 1xqx_A* 1xqy_A 1xqv_A Length = 293 | Back alignment and structure |
|---|
Score = 96.1 bits (240), Expect = 2e-23
Identities = 54/298 (18%), Positives = 91/298 (30%), Gaps = 38/298 (12%)
Query: 15 YIKSGEYRWFVRETGSADSRLGTIVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGFG 74
Y K + + + + + ++ +HG P S+ Y + M+ G D G G
Sbjct: 9 YAKVNGIYIYYKLCKAPEEKA-KLMTMHGGPGMSHDYLLSLRDMTKEGITVLFYDQFGCG 67
Query: 75 FSDKPEKGYDDFDFTENEFHEELDKLLDVLEVKYPFFLVVQGFLVGSYG----LTWALKN 130
S++P D FT + EE + L L FL+ G SYG L +A+K
Sbjct: 68 RSEEP----DQSKFTIDYGVEEAEALRSKLFGNEKVFLM--G---SSYGGALALAYAVKY 118
Query: 131 PSRISKLAILNSPLTASS----------PLPGLFQQLRIPLLGEFTAQNAIMAERFIEAG 180
+ L + + LP ++ + +N E
Sbjct: 119 QDHLKGLIVSGGLSSVPLTVKEMNRLIDELPAKYRDAIKKYGSSGSYENPEYQEAVNYFY 178
Query: 181 SPYVLKLDKADVYRLPYLASSGPGFALLEAARKVNFKDISSRIGAGFSSGS-WDK----- 234
++L+ + L L + F I DK
Sbjct: 179 HQHLLRSEDWPPEVLKSLEYAERRNVYRIMNGPNEF-----TITGTIKDWDITDKISAIK 233
Query: 235 -PVLVAWGISDKYLPQSVAEEFQKGNPNVVKLQMIEGAGHMPQEDWPEKVVDGLRYFF 291
P L+ G D+ P VA + +L + H+ + E L F
Sbjct: 234 IPTLITVGEYDEVTPN-VARVIHEKIAG-SELHVFRDCSHLTMWEDREGYNKLLSDFI 289
|
| >2cjp_A Epoxide hydrolase; HET: PG4 VPR; 1.95A {Solanum tuberosum} PDB: 3cxu_A* Length = 328 | Back alignment and structure |
|---|
Score = 96.7 bits (241), Expect = 2e-23
Identities = 53/321 (16%), Positives = 99/321 (30%), Gaps = 54/321 (16%)
Query: 15 YIKSGEYRWFVRETGSADSRLGTIVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGFG 74
+ + E G TI+F+HG P YS+R+ M +++ G+ APD G+G
Sbjct: 15 MVAVNGLNMHLAELGEGP----TILFIHGFPELWYSWRHQMVYLAERGYRAVAPDLRGYG 70
Query: 75 FSDKPEKGYDDFDFTENEFHEELDKLLDVLEVKYPFFLVVQGFLVG-----SYGLTWALK 129
+ D F+ ++ LL+ + + F+V L
Sbjct: 71 DTTGAPLN-DPSKFSILHLVGDVVALLEAIAPNEE-----KVFVVAHDWGALIAWHLCLF 124
Query: 130 NPSRISKLAILNSPLTASSP-----------LPGLFQQLRIPLLG----EFTAQN-AIMA 173
P ++ L L+ + +P R + G EF +
Sbjct: 125 RPDKVKALVNLSVHFSKRNPKMNVVEGLKAIYGEDHYISRFQVPGEIEAEFAPIGAKSVL 184
Query: 174 ERFIEAGSPYVLKLDKADVYRLPYLASSGPGFALLEAARKV---NFK------------- 217
++ + P K A L E F+
Sbjct: 185 KKILTYRDPAPFYFPKGKGLEAIPDAPVALSSWLSEEELDYYANKFEQTGFTGAVNYYRA 244
Query: 218 -DISSRIGAGFSSGSWDKPVLVAWGISDKYLPQSVAEEFQKGN------PNVVKLQMIEG 270
I+ + A ++ P G D A+E+ P + ++ ++EG
Sbjct: 245 LPINWELTAPWTGAQVKVPTKFIVGEFDLVYHIPGAKEYIHNGGFKKDVPLLEEVVVLEG 304
Query: 271 AGHMPQEDWPEKVVDGLRYFF 291
A H ++ P ++ + F
Sbjct: 305 AAHFVSQERPHEISKHIYDFI 325
|
| >3qit_A CURM TE, polyketide synthase; thioesterase, alpha/beta hydrolase, decarboxylase, sulfate elimination, terminal alkene production; 1.68A {Lyngbya majuscula 19L} Length = 286 | Back alignment and structure |
|---|
Score = 95.9 bits (239), Expect = 2e-23
Identities = 47/302 (15%), Positives = 94/302 (31%), Gaps = 55/302 (18%)
Query: 15 YIKSGEYRWFVRETGSADSRLGTIVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGFG 74
+++ G + + GS + + ++ +HG +++ V ++ G+ APD G G
Sbjct: 8 FLEFGGNQICLCSWGSPEHPV--VLCIHGILEQGLAWQEVALPLAAQGYRVVAPDLFGHG 65
Query: 75 FSDKPEKG--YDDFDFTENEFHEELDKLLDVLEVKYPFFLVVQGFLVG-SYG----LTWA 127
S E Y F ++D+++ L + P LVG S G A
Sbjct: 66 RSSHLEMVTSYSSLTFL-----AQIDRVIQELPDQ-PL------LLVGHSMGAMLATAIA 113
Query: 128 LKNPSRISKLAILNSPLTASSP---------------LPGLFQQLRIPLLGE----FTAQ 168
P +I +L ++ PL A L Q P +
Sbjct: 114 SVRPKKIKELILVELPLPAEESKKESAVNQLTTCLDYLSSTPQHPIFPDVATAASRLRQA 173
Query: 169 NAIMAERFIEAGSPYVLKLDKADVYRL---PYLASSGPGFALLEAARKVNFKDISSRIGA 225
++E F + + + + R + + + + ++ I
Sbjct: 174 IPSLSEEFSYILAQRITQPN-QGGVRWSWDAIIRTRSILGLNNLPGGRSQYLEMLKSIQV 232
Query: 226 GFSSGSWDKPVLVAWGISDKYLPQSVAEEFQKGNPNVVKLQMIEGAGHMPQEDWPEKVVD 285
P + +G S K ++ + K + G GH D +
Sbjct: 233 ---------PTTLVYGDSSKLNRPEDLQQQKMTMTQ-AKRVFLSG-GHNLHIDAAAALAS 281
Query: 286 GL 287
+
Sbjct: 282 LI 283
|
| >3qvm_A OLEI00960; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta hydrolase fold, hydrolase; 2.00A {Oleispira antarctica} Length = 282 | Back alignment and structure |
|---|
Score = 93.9 bits (234), Expect = 1e-22
Identities = 45/275 (16%), Positives = 93/275 (33%), Gaps = 24/275 (8%)
Query: 22 RWFVRETGSADSRLGTIVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGFGFSDKPEK 81
R + TG + T++ HG +R ++ ++ F D++G G SD
Sbjct: 18 RNNINITGGGEK---TVLLAHGFGCDQNMWRFMLPELE-KQFTVIVFDYVGSGQSDLESF 73
Query: 82 GYDDFDFTENEFHEELDKLLDVLEVKYPFFLVVQGFLVGSY-GLTWALKNPSRISKLAIL 140
+ + + ++++++L L++ ++ G V S + RIS + ++
Sbjct: 74 STKRYS-SLEGYAKDVEEILVALDLV-NVSII--GHSVSSIIAGIASTHVGDRISDITMI 129
Query: 141 NS--PLTASSP-LPGLFQQLRIPLLGEFTAQNAIMAERFIEAGSPYVLKLDK--ADVYRL 195
P G F++ + L +N + +P V+ + L
Sbjct: 130 CPSPCFMNFPPDYVGGFERDDLEELINLMDKN---YIGWANYLAPLVMGASHSSELIGEL 186
Query: 196 PYLASSGPGFALLEAARKVNFKDISSRIGAGFSSGSWDKPVLVAWGISDKYLPQSVAEEF 255
+ A+ F D S + P L+ D V +
Sbjct: 187 SGSFCTTDPIVAKTFAKATFFSDYRSLLEDI------STPALIFQSAKDSLASPEVGQYM 240
Query: 256 QKGNPNVVKLQMIEGAGHMPQEDWPEKVVDGLRYF 290
+ PN +L++I+ GH + L +F
Sbjct: 241 AENIPN-SQLELIQAEGHCLHMTDAGLITPLLIHF 274
|
| >1ehy_A Protein (soluble epoxide hydrolase); alpha/beta hydrolase fold, epoxide degradation, epichlorohydrin; 2.10A {Agrobacterium tumefaciens} SCOP: c.69.1.11 Length = 294 | Back alignment and structure |
|---|
Score = 91.9 bits (229), Expect = 6e-22
Identities = 51/307 (16%), Positives = 106/307 (34%), Gaps = 56/307 (18%)
Query: 15 YIKSGEYRWFVRETGSADSRLGTIVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGFG 74
++ + + G+ T++ LHG P + + V+ +++ + PD GFG
Sbjct: 13 EVQLPDVKIHYVREGAGP----TLLLLHGWPGFWWEWSKVIGPLAEH-YDVIVPDLRGFG 67
Query: 75 FSDKPEK----GYDDFDFTENEFHEELDKLLDVLEVKYPFFLVVQGFLVGSY-GLTWALK 129
S+KP+ Y + + LLD L ++ ++V G + + K
Sbjct: 68 DSEKPDLNDLSKYSLDKAAD-----DQAALLDALGIE-KAYVV--GHDFAAIVLHKFIRK 119
Query: 130 NPSRISKLAILNSPLTASSPLPGLFQQLR---------IPLLGEFTAQNAIMAERFIE-- 178
R+ K AI + P+ + + + E + + +++ +
Sbjct: 120 YSDRVIKAAIFDPIQPDFGPVYFGLGHVHESWYSQFHQLDMAVEVVGSSREVCKKYFKHF 179
Query: 179 ----AGSPYVLKLDKADVYRLPYLASSGPGF---------ALLEAARKVNFKDISSRIGA 225
+ +L ++ +V+ P A + + +
Sbjct: 180 FDHWSYRDELLTEEELEVHVDNC---MKPDNIHGGFNYYRANIRPDAALWTDLDHTMS-- 234
Query: 226 GFSSGSWDKPVLVAWGISDKYLPQ-SVAEEFQKGNPNVVKLQMIEGAGHMPQEDWPEKVV 284
D PV + WG+ D +P + E K N ++ IE GH + PE +
Sbjct: 235 -------DLPVTMIWGLGDTCVPYAPLIEFVPKYYSNY-TMETIEDCGHFLMVEKPEIAI 286
Query: 285 DGLRYFF 291
D ++ F
Sbjct: 287 DRIKTAF 293
|
| >1imj_A CIB, CCG1-interacting factor B; alpha/beta hydrolase, CCG1 interactor; 2.20A {Homo sapiens} SCOP: c.69.1.23 Length = 210 | Back alignment and structure |
|---|
Score = 89.6 bits (222), Expect = 1e-21
Identities = 28/152 (18%), Positives = 53/152 (34%), Gaps = 8/152 (5%)
Query: 14 SYIKSGEYRWFVRETGSADSRLG-TIVFLHGAPSHSYSYRNV--MSQMSDAGFHCFAPDW 70
I+ F RE + +++ LHG S +++N+ + +++ AG+ A D
Sbjct: 10 GTIQVQGQALFFREALPGSGQARFSVLLLHGIRFSSETWQNLGTLHRLAQAGYRAVAIDL 69
Query: 71 LGFGFSDKPEKGYDDFDFTENEFHEELDKLLDVLEVKYPFFLVVQGFLVGSYGLTWALKN 130
G G S + E L ++D LE+ P ++ G Y L +
Sbjct: 70 PGLGHSKEAA---APAPIGELAPGSFLAAVVDALELG-PPVVISPSLS-GMYSLPFLTAP 124
Query: 131 PSRISKLAILNSPLTASSPLPGLFQQLRIPLL 162
S++ + T L+
Sbjct: 125 GSQLPGFVPVAPICTDKINAANYASVKTPALI 156
|
| >1imj_A CIB, CCG1-interacting factor B; alpha/beta hydrolase, CCG1 interactor; 2.20A {Homo sapiens} SCOP: c.69.1.23 Length = 210 | Back alignment and structure |
|---|
Score = 43.8 bits (103), Expect = 2e-05
Identities = 19/60 (31%), Positives = 27/60 (45%), Gaps = 3/60 (5%)
Query: 232 WDKPVLVAWGISDKYLPQSVAEEFQKGNPNVVKLQMIEGAGHMPQEDWPEKVVDGLRYFF 291
P L+ +G D S E K PN ++ +++GAGH D PE+ GL F
Sbjct: 150 VKTPALIVYGDQDPMGQTSF--EHLKQLPNH-RVLIMKGAGHPCYLDKPEEWHTGLLDFL 206
|
| >2yys_A Proline iminopeptidase-related protein; TTHA1809, structural genomics, unknown function; 2.20A {Thermus thermophilus} Length = 286 | Back alignment and structure |
|---|
Score = 91.0 bits (226), Expect = 1e-21
Identities = 54/289 (18%), Positives = 95/289 (32%), Gaps = 36/289 (12%)
Query: 15 YIKSGEYRWFVRETGSADSRLGTIVFLHGAPSHSYSYRNVMSQMSD--AGFHCFAPDWLG 72
Y+ GE +V + G + + LHG P + + D GF D G
Sbjct: 7 YVPVGEAELYVEDVGPVEGP--ALFVLHGGPGGNAYVL--REGLQDYLEGFRVVYFDQRG 62
Query: 73 FGFSDKPEKGYDDFDFTENEFHEELDKLLDVLEVKYPFFLVVQGFLVGSY-GLTWALKNP 131
G S + + D FT + E+ L + L V+ F L+ GF G+ L + P
Sbjct: 63 SGRSLELPQ--DPRLFTVDALVEDTLLLAEALGVE-RFGLLAHGF--GAVVALEVLRRFP 117
Query: 132 SRISKLAILNSPLTASSPLPGLFQQLRIPLLGEFTAQNAIMAERFIEAGSPYVLKLDKAD 191
+ +L + L + + L + +N A + E + + +
Sbjct: 118 QAEGAI-LLAPWVNFPWLAARLAEAAGLAPLPDP-EENLKEALKREEPKALFDRLMFPTP 175
Query: 192 VYRLP---------YLASSGPGFALL-EAARKVNFKDISSRIGAGFSSGSWDKPVLVAWG 241
R+ L S PG A L ++++ + P+ V G
Sbjct: 176 RGRMAYEWLAEGAGILGSDAPGLAFLRNGLWRLDYTPYLTPERR---------PLYVLVG 226
Query: 242 ISDKYLPQSVAEEFQKGNPNVVKLQMIEGAGHMPQEDWPEKVVDGLRYF 290
D E + ++++ AGH D PE + +
Sbjct: 227 ERDGTSYPYAEEVASR--LRA-PIRVLPEAGHYLWIDAPEAFEEAFKEA 272
|
| >3r40_A Fluoroacetate dehalogenase; FACD, defluorinase, alpha/beta hydrolase, hydrolase; 1.05A {Rhodopseudomonas palustris} PDB: 3r3w_A 3r3x_A 3r3v_A 3r3u_A 3r3z_A 3r41_A 3r3y_A Length = 306 | Back alignment and structure |
|---|
Score = 91.2 bits (227), Expect = 2e-21
Identities = 61/298 (20%), Positives = 105/298 (35%), Gaps = 35/298 (11%)
Query: 15 YIKSGEYRWFVRETGSADSRLGTIVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGFG 74
+I + R F R G ++ LHG P + V ++++ F D G+G
Sbjct: 17 WINTSSGRIFARVGGDGP----PLLLLHGFPQTHVMWHRVAPKLAE-RFKVIVADLPGYG 71
Query: 75 FSDKPEKGYDDFDFTENEFHEELDKLLDVLEVKYPFFLVVQ--GFLVGSYGLTWALKNPS 132
+SD PE +T+ ++L + ++ L F L G AL +P
Sbjct: 72 WSDMPESDEQHTPYTKRAMAKQLIEAMEQLGHV-HFALAGHNRG---ARVSYRLALDSPG 127
Query: 133 RISKLAILNSPLTAS--SPLPGLFQQLRIPLLGEFTAQNAIMAERFIEA----------- 179
R+SKLA+L+ T + + F AQ A + E +
Sbjct: 128 RLSKLAVLDILPTYEYWQRMNRAYALKIYHWS--FLAQPAPLPENLLGGDPDFYVKAKLA 185
Query: 180 ---GSPYVLKLDKADVYRLPYLAS-SGPGF--ALLEAARKVNFKDISSRIGAGFSSGSWD 233
+ + D V Y + + P + E R + D +
Sbjct: 186 SWTRAGDLSAFDPRAVEH--YRIAFADPMRRHVMCEDYRAGAYADFEHDKIDVEAGNKIP 243
Query: 234 KPVLVAWGISDKYLPQSVAEEFQKGNPNVVKLQMIEGAGHMPQEDWPEKVVDGLRYFF 291
P+L WG S + + + + V+ IE +GH E+ P++ + L FF
Sbjct: 244 VPMLALWGASGIAQSAATPLDVWRKWASDVQGAPIE-SGHFLPEEAPDQTAEALVRFF 300
|
| >3l80_A Putative uncharacterized protein SMU.1393C; alpha/beta hydrolase fold, carboxylesterase, Ser- hydrolase; 2.00A {Streptococcus mutans} Length = 292 | Back alignment and structure |
|---|
Score = 90.8 bits (225), Expect = 2e-21
Identities = 35/262 (13%), Positives = 77/262 (29%), Gaps = 19/262 (7%)
Query: 37 TIVFLHGA--PSHSYSYRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFH 94
VFL GA S + ++ N++ ++ D D G+S + + ++
Sbjct: 43 CFVFLSGAGFFSTADNFANIIDKLPD-SIGILTIDAPNSGYSPVS----NQANVGLRDWV 97
Query: 95 EELDKLLDVLEVKYPFFLVVQGF-LVGSYGLTWALKNPSRISKLAILNSPLTASSPLPGL 153
+ + + + + + L + G L ++ L T
Sbjct: 98 NAILMIFEHFKFQ-SYLLC--VHSIGGFAALQIMNQSSKACLGFIGLEP--TTVMIYRAG 152
Query: 154 FQQLRIPLLGEFTAQNAIMAERFIEAGSPYVLKLDKADVYRLPYLASSGPGFALLEAARK 213
F P L + A+R +L + L +
Sbjct: 153 FSSDLYPQLALRRQKLKTAADRLNYLKDLSRSHFSSQQFKQL-WRGYDYCQRQLNDVQSL 211
Query: 214 VNFKDISSRIGAGF-SSGSWDKPVLVAWGISDKYLPQSVAEEFQKGNPNVVKLQMIEGAG 272
+FK + F + S P +V + + + E+ + KL ++ G
Sbjct: 212 PDFKIRLALGEEDFKTGISEKIPSIVFSESFRE--KEYLESEYLNKHTQ-TKL-ILCGQH 267
Query: 273 HMPQEDWPEKVVDGLRYFFLNY 294
H +++ + N+
Sbjct: 268 HYLHWSETNSILEKVEQLLSNH 289
|
| >3hss_A Putative bromoperoxidase; alpha beta hydrolase, oxidoreductase, hydrolase; 1.90A {Mycobacterium tuberculosis} PDB: 3e3a_A 3hys_A 3hzo_A Length = 293 | Back alignment and structure |
|---|
Score = 89.3 bits (222), Expect = 6e-21
Identities = 53/278 (19%), Positives = 92/278 (33%), Gaps = 35/278 (12%)
Query: 24 FVRETGSADSRLGTIVFLHGAPSHSYSYR-NVMSQMSDAGFHCFAPDWLGFGFSDKPEKG 82
+ G+ D +VF+ G ++ + + AG+ C D G G ++ E G
Sbjct: 36 AYDDNGTGD----PVVFIAGRGGAGRTWHPHQVPAFLAAGYRCITFDNRGIGATENAE-G 90
Query: 83 YDDFDFTENEFHEELDKLLDVLEVKYPFFLVVQGFLVGSY-GLTWALKNPSRISKLAILN 141
+ + L++ L++ P +V G +G++ + P +S ++
Sbjct: 91 FTTQTMV-----ADTAALIETLDIA-PARVV--GVSMGAFIAQELMVVAPELVSSAVLMA 142
Query: 142 S---PLTASSPLPGLFQQLRIPLLGEFTAQNAIMAERFIEAGSPYVLKLDKADVYRLPYL 198
+ A +L + +A R +E S L D A +
Sbjct: 143 TRGRLDRARQFFNKAEAELYDSGVQLPPTYDA--RARLLENFSRKTLNDDVAVGDWIAMF 200
Query: 199 ASSGPG-----FALLEAARKVNFKDISSRIGAGFSSGSWDKPVLVAWGISDKYLPQSVAE 253
+ L+ A + N I A PVLV D P +
Sbjct: 201 SMWPIKSTPGLRCQLDCAPQTNRLPAYRNIAA---------PVLVIGFADDVVTPPYLGR 251
Query: 254 EFQKGNPNVVKLQMIEGAGHMPQEDWPEKVVDGLRYFF 291
E PN + I AGH+ + PE V + FF
Sbjct: 252 EVADALPN-GRYLQIPDAGHLGFFERPEAVNTAMLKFF 288
|
| >3c5v_A PME-1, protein phosphatase methylesterase 1; demethylase, PP2A, alternative splicing, hydrolase, phosphoprotein, serine esterase; 2.00A {Homo sapiens} PDB: 3c5w_P Length = 316 | Back alignment and structure |
|---|
Score = 88.7 bits (220), Expect = 1e-20
Identities = 45/292 (15%), Positives = 100/292 (34%), Gaps = 34/292 (11%)
Query: 16 IKSGEYRWFVRETGSADSRLGTIVFLHGAPSHSYSYRNVMSQMS-DAGFHCFAPDWLGFG 74
++G+ + V ++GS ++ LHG + S+ + + A D G
Sbjct: 22 NETGKDTFRVYKSGSEGP---VLLLLHGGGHSALSWAVFTAAIISRVQCRIVALDLRSHG 78
Query: 75 FSDKPEKGYDDFDFTENEFHEELDKLLDVLEVKYPFFLVVQGFLVG-SYG----LTWALK 129
+ + D + +++ +++ + P ++ L+G S G + A
Sbjct: 79 ETKVK----NPEDLSAETMAKDVGNVVEAMYGDLPPPIM----LIGHSMGGAIAVHTASS 130
Query: 130 N-PSRISKLAILN-SPLTASSPLPGLFQQLRIPLLGEFTAQNAIMAERFIEAGSPYVLKL 187
N + L +++ TA L + LR + +NAI E +++G L+
Sbjct: 131 NLVPSLLGLCMIDVVEGTAMDALNSMQNFLRGRPKTFKSLENAI--EWSVKSGQIRNLES 188
Query: 188 DKADVYRLPYLASSGPGFALLEAARKVNFKDISSRIGAGFSS---------GSWDKPVLV 238
+ + + ++ ++ + S P L+
Sbjct: 189 ARVSMVGQVKQCEGITSPEGSKKDHPYTWRIELAKTEKYWDGWFRGLSNLFLSCPIPKLL 248
Query: 239 AWGISDKYLPQSVAEEFQKGNPNVVKLQMIEGAGHMPQEDWPEKVVDGLRYF 290
D+ + Q ++Q++ GH ED P+KV + + F
Sbjct: 249 LLAGVDRLDKDLTIGQMQ---GKF-QMQVLPQCGHAVHEDAPDKVAEAVATF 296
|
| >1wom_A RSBQ, sigma factor SIGB regulation protein RSBQ; alpha/beta hydrolase, signaling protein; 2.50A {Bacillus subtilis} PDB: 1wpr_A* Length = 271 | Back alignment and structure |
|---|
Score = 87.7 bits (218), Expect = 2e-20
Identities = 46/273 (16%), Positives = 100/273 (36%), Gaps = 24/273 (8%)
Query: 24 FVRETGSADSRLGTIVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGY 83
V+ GS + +I+F G + V + D++G G SD
Sbjct: 12 HVKVKGSGKA---SIMFAPGFGCDQSVWNAVAPAFEE-DHRVILFDYVGSGHSDLRAYDL 67
Query: 84 DDFDFTENEFHEELDKLLDVLEVKYPFFLVVQGFLVGSY-GLTWALKNPSRISKLAILNS 142
+ + T + + +++ + + L++K V G VG+ G+ +++ P S L ++
Sbjct: 68 NRY-QTLDGYAQDVLDVCEALDLK-ETVFV--GHSVGALIGMLASIRRPELFSHLVMVGP 123
Query: 143 ---PLTASSPLPGLFQQLRIPLLGEFTAQN-AIMAERFIEAGSPYVLKLDKADVYRLPYL 198
L G F++ ++ L E +N A F + + + +
Sbjct: 124 SPCYLNDPPEYYGGFEEEQLLGLLEMMEKNYIGWATVFAATVLNQPDRPEIKEELESRFC 183
Query: 199 ASSGPGF-ALLEAARKVNFKDISSRIGAGFSSGSWDKPVLVAWGISDKYLPQSVAEEFQK 257
++ +AA + ++ S++ P L+ D P +V + +
Sbjct: 184 STDPVIARQFAKAAFFSDHREDLSKV---------TVPSLILQCADDIIAPATVGKYMHQ 234
Query: 258 GNPNVVKLQMIEGAGHMPQEDWPEKVVDGLRYF 290
P L+ +E GH P P++ + + +
Sbjct: 235 HLPY-SSLKQMEARGHCPHMSHPDETIQLIGDY 266
|
| >1q0r_A RDMC, aclacinomycin methylesterase; anthracycline, hydrolase, polyketide, tailoring enzyme, structural proteomics in europe, spine; HET: AKT 1PE; 1.45A {Streptomyces purpurascens} SCOP: c.69.1.28 PDB: 1q0z_A* Length = 298 | Back alignment and structure |
|---|
Score = 86.1 bits (213), Expect = 1e-19
Identities = 45/298 (15%), Positives = 79/298 (26%), Gaps = 29/298 (9%)
Query: 15 YIKSGEYRWFVRETGSADSRLGTIVFLHGAPSHSYSYRN-VMSQMSDAGFHCFAPDWLGF 73
+ SG+ + + G ++ + G + + + +++D G H D
Sbjct: 5 IVPSGDVELWSDDFGDPADP--ALLLVMGGNLSALGWPDEFARRLADGGLHVIRYDHRDT 62
Query: 74 GFSDKPEKGYDDFDFTENEFHEELDKLLDVLEVKYPFFLVVQGFLVGSY-GLTWALKNPS 132
G S + + F E + +LD V +V G +G+ AL +
Sbjct: 63 GRSTTRDFAAHPYGFGE--LAADAVAVLDGWGVD-RAHVV--GLSMGATITQVIALDHHD 117
Query: 133 RISKLAILNS-PLTASSPLPGLFQQLRIPLLGEFTAQNAIMAERFIEAGSPYVLKLDKAD 191
R+S L +L L P L + P + +
Sbjct: 118 RLSSLTMLLGGGLDIDFDANIERVMRGEPTLDGLPGPQQPFLDALALMNQPAEGRAAEVA 177
Query: 192 VYRLPYLASSGPGFALLEAARKVNFKDISSRIG-----------AGFSSGSWDK------ 234
+ SG G +A + G S
Sbjct: 178 KRVSKWRILSGTGVPFDDAEYARWEERAIDHAGGVLAEPYAHYSLTLPPPSRAAELREVT 237
Query: 235 -PVLVAWGISDKYLPQSVAEEFQKGNPNVVKLQMIEGAGHMPQEDWPEKVVDGLRYFF 291
P LV D P + P +L I G GH + + +
Sbjct: 238 VPTLVIQAEHDPIAPAPHGKHLAGLIPTA-RLAEIPGMGHALPSSVHGPLAEVILAHT 294
|
| >3v48_A Aminohydrolase, putative aminoacrylate hydrolase RUTD; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.10A {Escherichia coli SE11} Length = 268 | Back alignment and structure |
|---|
Score = 85.0 bits (211), Expect = 2e-19
Identities = 47/280 (16%), Positives = 90/280 (32%), Gaps = 36/280 (12%)
Query: 21 YRWFVRETGSADSRLGTIVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGFGFSDKPE 80
A +V + G + ++ + + D G G +
Sbjct: 5 LSLSPPPYADAP----VVVLISGLGGSGSYWLPQLAVLE-QEYQVVCYDQRGTGNNPDTL 59
Query: 81 KGYDDFDFTENEFHEELDKLLDVLEVKYPFFLVVQGFLVGSY-GLTWALKNPSRISKLAI 139
D++ + EL + L ++ + +V G +G+ G+ AL P+ ++ L
Sbjct: 60 AE----DYSIAQMAAELHQALVAAGIE-HYAVV--GHALGALVGMQLALDYPASVTVLIS 112
Query: 140 LNSPLTASSPLPGLFQQLRIPLLGEFTAQNAIMA-------ERFIEAGSPYVLKLDKADV 192
+N L ++ FQ R LL AQ + A ++ A +P + A+
Sbjct: 113 VNGWLRINAHTRRCFQV-RERLLYSGGAQAWVEAQPLFLYPADWMAARAPRLE----AED 167
Query: 193 YRLPYLASSGPGF-ALLEAARKVNFKDISSRIGAGFSSGSWDKPVLVAWGISDKYLPQSV 251
L A ++ +F + RI PV + D +P +
Sbjct: 168 ALALAHFQGKNNLLRRLNALKRADFSHHADRIRC---------PVQIICASDDLLVPTAC 218
Query: 252 AEEFQKGNPNVVKLQMIEGAGHMPQEDWPEKVVDGLRYFF 291
+ E P+ + ++ GH PE L
Sbjct: 219 SSELHAALPDS-QKMVMPYGGHACNVTDPETFNALLLNGL 257
|
| >1r3d_A Conserved hypothetical protein VC1974; structural genomics, hydrolase, NYSGXRC, NEW YORK SGX research center for structural genomics, PSI; 1.90A {Vibrio cholerae} SCOP: c.69.1.35 Length = 264 | Back alignment and structure |
|---|
Score = 84.3 bits (209), Expect = 3e-19
Identities = 40/286 (13%), Positives = 79/286 (27%), Gaps = 48/286 (16%)
Query: 21 YRWFVRETGSADSRLGTIVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGFGFSDKPE 80
+ + + +V +HG ++ V+S ++ D G G + +
Sbjct: 5 NQLHFAKPTARTP---LVVLVHGLLGSGADWQPVLSHLARTQCAALTLDLPGHGTNPER- 60
Query: 81 KGYDDFDFTENEFHEELDKLLDVLEVKYPFFLVVQGFLVG-SYG----LTWALKNPSRIS 135
+F E E +++ + LVG S G + +
Sbjct: 61 ---HCDNFA--EAVEMIEQTVQAHVTSEVPV-----ILVGYSLGGRLIMHGLAQGAFSRL 110
Query: 136 KLAILNSPLTASSPLPGLFQQLRIPLLGEFTAQNAIMAERFIEAGSPYVLKLDKADVYRL 195
L + + + + A+RF + +VL D Y+
Sbjct: 111 NLRGA---IIEGGHFGLQENEEKAARW----QHDQQWAQRFSQQPIEHVLS----DWYQQ 159
Query: 196 PYLAS-SGPGFALLEAARKVNFKDISSRIGAGFSSGS----WDK------PVLVAWGISD 244
+S + L A R N + + S P+ G D
Sbjct: 160 AVFSSLNHEQRQTLIAQRSANLGSSVAHMLLATSLAKQPYLLPALQALKLPIHYVCGEQD 219
Query: 245 KYLPQSVAEEFQKGNPNVVKLQMIEGAGHMPQEDWPEKVVDGLRYF 290
Q +AE + + AGH + P+ ++
Sbjct: 220 SKFQQ-LAESSG------LSYSQVAQAGHNVHHEQPQAFAKIVQAM 258
|
| >3b12_A Fluoroacetate dehalogenase; dehalogease, hydrolase; 1.20A {Burkholderia SP} PDB: 1y37_A Length = 304 | Back alignment and structure |
|---|
Score = 84.6 bits (210), Expect = 4e-19
Identities = 53/303 (17%), Positives = 93/303 (30%), Gaps = 48/303 (15%)
Query: 15 YIKSGEYRWFVRETGSADSRLGTIVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGFG 74
+ G+ GS ++ LHG P + + + V ++ + D G+G
Sbjct: 9 LVDVGDVTINCVVGGSGP----ALLLLHGFPQNLHMWARVAPLLA-NEYTVVCADLRGYG 63
Query: 75 FSDKPEKGYDDFDFTENEFHEELDKLLDVLEVKYPFFLVVQ--GFLVGSYGLTWALKNPS 132
S KP D +++ + +L+ L + F LV G G AL +P
Sbjct: 64 GSSKPVGAPDHANYSFRAMASDQRELMRTLGFE-RFHLVGHARGGRT---GHRMALDHPD 119
Query: 133 RISKLAILNSPLTASSPLPGLFQQLRIPLLGEFTAQNAIMAERFIEAGSPYVLK------ 186
+ LA+L+ T R F Q A E+ I A +
Sbjct: 120 SVLSLAVLDIIPTYVMFEEVDRFVARAYWHWYFLQQPAPYPEKVIGADPDTFYEGCLFGW 179
Query: 187 -------LDKADVYRLPYLAS-SGPGF---------ALLEAARKVNFKDISSRIGAGFSS 229
D + Y P A +++ D+ ++
Sbjct: 180 GATGADGFDPEQLEE--YRKQWRDPAAIHGSCCDYRAGGTIDFELDHGDLGRQVQC---- 233
Query: 230 GSWDKPVLVAWGISDKYLPQ-SVAEEFQKGNPNVVKLQMIEGAGHMPQEDWPEKVVDGLR 288
P LV G + + + N ++ + G GH + +P+ LR
Sbjct: 234 -----PALVFSGSAGLMHSLFEMQVVWAPRLAN-MRFASLPG-GHFFVDRFPDDTARILR 286
Query: 289 YFF 291
F
Sbjct: 287 EFL 289
|
| >3bdi_A Uncharacterized protein TA0194; NP_393672.1, predicted CIB-like hydrolase, structural genomi center for structural genomics; HET: MSE; 1.45A {Thermoplasma acidophilum dsm 1728} Length = 207 | Back alignment and structure |
|---|
Score = 81.1 bits (200), Expect = 1e-18
Identities = 26/132 (19%), Positives = 46/132 (34%), Gaps = 6/132 (4%)
Query: 14 SYIKSGEYRWFVRETGSADSRLGTIVFLHGAPSHSYSYRN--VMSQMSDAGFHCFAPDWL 71
+I R F R+ + +R +I HG S + + + S G++ +APD+
Sbjct: 7 EFIDVNGTRVFQRKMVTDSNR-RSIALFHGYSFTSMDWDKADLFNNYSKIGYNVYAPDYP 65
Query: 72 GFGFSDKPEKGYDDFDFTENEFHEELDKLLDVLEVKYPFFLVVQGFLVGSYGLTWALKNP 131
GFG S E Y E + L V ++ G + L+ P
Sbjct: 66 GFGRSASSE-KYGIDRGDLKHAAEFIRDYLKANGVA-RSVIMGASMG-GGMVIMTTLQYP 122
Query: 132 SRISKLAILNSP 143
+ + +
Sbjct: 123 DIVDGIIAVAPA 134
|
| >3bdi_A Uncharacterized protein TA0194; NP_393672.1, predicted CIB-like hydrolase, structural genomi center for structural genomics; HET: MSE; 1.45A {Thermoplasma acidophilum dsm 1728} Length = 207 | Back alignment and structure |
|---|
Score = 47.2 bits (112), Expect = 1e-06
Identities = 15/60 (25%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
Query: 232 WDKPVLVAWGISDKYLPQSVAEEFQKGNPNVVKLQMIEGAGHMPQEDWPEKVVDGLRYFF 291
+ L+ WG D +P ++++E+ +L+++EG+GH + PE+ V F
Sbjct: 146 IRQKTLLVWGSKDHVVPIALSKEYASIISGS-RLEIVEGSGHPVYIEKPEEFVRITVDFL 204
|
| >3qyj_A ALR0039 protein; alpha/beta fold, hydrolase; 1.78A {Nostoc SP} Length = 291 | Back alignment and structure |
|---|
Score = 81.9 bits (203), Expect = 3e-18
Identities = 54/302 (17%), Positives = 97/302 (32%), Gaps = 47/302 (15%)
Query: 15 YIKSGEYRWFVRETGSADSRLGTIVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGFG 74
+ + E R + + G ++ LHG P + + ++ F A D G+G
Sbjct: 9 IVDTTEARINLVKAGHGA----PLLLLHGYPQTHVMWHKIAPLLA-NNFTVVATDLRGYG 63
Query: 75 FSDKPEKGYDDFDFTENEFHEELDKLLDVLEVKYPFFLVVQGFLVGSY-GLTWALKNPSR 133
S +P ++++ ++ +++ L + F++V G G+ AL +P R
Sbjct: 64 DSSRPASVPHHINYSKRVMAQDQVEVMSKLGYE-QFYVV--GHDRGARVAHRLALDHPHR 120
Query: 134 ISKLAILNSPLTASSPLPGLFQQLRIPLLGEFTAQNAIMAERFIEA-------------- 179
+ KLA+L+ T + F Q + E I A
Sbjct: 121 VKKLALLDIAPTHKMYRTTDQEFATAYYHWFFLIQPDNLPETLIGANPEYYLRKCLEKWG 180
Query: 180 GSPYVLKLDKADVYRLPYLASSGPGF---------ALLEAARKVNFKDISSRIGAGFSSG 230
Y S P A + + D+ +I
Sbjct: 181 KDFSAFHPQALAEYIR---CFSQPAVIHATCEDYRAAATIDLEHDELDMKQKISC----- 232
Query: 231 SWDKPVLVAWGISDKYL-PQSVAEEFQKGNPNVVKLQMIEGAGHMPQEDWPEKVVDGLRY 289
PVLV WG V +++ +V Q + GH E+ PE+ +
Sbjct: 233 ----PVLVLWGEKGIIGRKYDVLATWRERAIDV-SGQSLP-CGHFLPEEAPEETYQAIYN 286
Query: 290 FF 291
F
Sbjct: 287 FL 288
|
| >2e3j_A Epoxide hydrolase EPHB; epoxide hydrolase B, structural mycobacterium tuberculosis structural proteomics project, X hydrolase; 2.10A {Mycobacterium tuberculosis} PDB: 2zjf_A* Length = 356 | Back alignment and structure |
|---|
Score = 82.0 bits (202), Expect = 6e-18
Identities = 43/258 (16%), Positives = 82/258 (31%), Gaps = 24/258 (9%)
Query: 14 SYIKSGEYRWFVRETGSADSRLGTIVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGF 73
+ R D + +V LHG P YS+R+ + ++ AG+ A D G+
Sbjct: 6 RILNCRGTRIHAVADSPPDQQGPLVVLLHGFPESWYSWRHQIPALAGAGYRVVAIDQRGY 65
Query: 74 GFSDKPE--KGYDDFDFTENEFHEELDKLLDVLEVKYPFFLVVQGFLVGSYGLTW--ALK 129
G S K K Y + ++ +LD + F+V + G+ + W A
Sbjct: 66 GRSSKYRVQKAYRIKELV-----GDVVGVLDSYGAE-QAFVVGHDW--GAP-VAWTFAWL 116
Query: 130 NPSRISKLAILNSPLTASSPLPGLFQQLRIPLLGEFTAQNAI-----MAERFIEAGSP-Y 183
+P R + + ++ P + ++ + A + F
Sbjct: 117 HPDRCAGVVGISVPFAGRGVIGLPGSPFGERRPSDYHLELAGPGRVWYQDYFAVQDGIIT 176
Query: 184 VLKLDKADVYRLPYLASSGPG-----FALLEAARKVNFKDISSRIGAGFSSGSWDKPVLV 238
++ D SG G A ++A + D I AG + +
Sbjct: 177 EIEEDLRGWLLGLTYTVSGEGMMAATKAAVDAGVDLESMDPIDVIRAGPLCMAEGARLKD 236
Query: 239 AWGISDKYLPQSVAEEFQ 256
A+ + +
Sbjct: 237 AFVYPETMPAWFTEADLD 254
|
| >2e3j_A Epoxide hydrolase EPHB; epoxide hydrolase B, structural mycobacterium tuberculosis structural proteomics project, X hydrolase; 2.10A {Mycobacterium tuberculosis} PDB: 2zjf_A* Length = 356 | Back alignment and structure |
|---|
Score = 42.3 bits (99), Expect = 1e-04
Identities = 16/59 (27%), Positives = 20/59 (33%), Gaps = 2/59 (3%)
Query: 235 PVLVAWGISD--KYLPQSVAEEFQKGNPNVVKLQMIEGAGHMPQEDWPEKVVDGLRYFF 291
P L G D E + PN MI GH Q++ PE+ L F
Sbjct: 293 PALFIGGQYDVGTIWGAQAIERAHEVMPNYRGTHMIADVGHWIQQEAPEETNRLLLDFL 351
|
| >3i28_A Epoxide hydrolase 2; aromatic hydrocarbons catabolism, detoxification, magnesium, metal-binding, peroxisome; HET: 34N; 1.95A {Homo sapiens} PDB: 1s8o_A* 1zd2_P* 1vj5_A* 1zd4_A* 1zd5_A* 3i1y_A* 1zd3_A* 3koo_A* 3otq_A* 1cqz_A 1cr6_A* 1ek1_A* 1ek2_A* 3ans_A* 3ant_A* 3pdc_A* Length = 555 | Back alignment and structure |
|---|
Score = 82.3 bits (203), Expect = 8e-18
Identities = 63/328 (19%), Positives = 105/328 (32%), Gaps = 66/328 (20%)
Query: 9 GREYGSYIKSGEYRWFVRETGSADSRLGTIVFLHGAPSHSYSYRNVMSQMSDAGFHCFAP 68
+G R E GS + HG P YS+R + ++ AG+ A
Sbjct: 236 DMSHGYVTVKPRVRLHFVELGSGP----AVCLCHGFPESWYSWRYQIPALAQAGYRVLAM 291
Query: 69 DWLGFGFSDKPE--KGYDDFDFTENEFHEELDKLLDVLEVKYPFFLVVQGFLVGSYGLTW 126
D G+G S P + Y +E+ LD L + + + G L W
Sbjct: 292 DMKGYGESSAPPEIEEYCMEVLC-----KEMVTFLDKLGLS-QAVFIGHDW--GG-MLVW 342
Query: 127 --ALKNPSRISKLAILNSPLTASSPLPGLFQQLRIPLLGEFTAQNAIMAERFIEAGSP-Y 183
AL P R+ +A LN+P ++P + ++ F Q F E G
Sbjct: 343 YMALFYPERVRAVASLNTPFIPANPNMSPLESIKA--NPVFDYQL-----YFQEPGVAEA 395
Query: 184 VLKLDKADVYRLPYLASSGPGFALLEAARKVNFKDISSRIGA------------------ 225
L+ + + ++ + AS ++ + S +
Sbjct: 396 ELEQNLSRTFKSLFRASDESVLSMHKVCEAGGLFVNSPEEPSLSRMVTEEEIQFYVQQFK 455
Query: 226 --GFSSG-SW-------------------DKPVLVAWGISDKYLPQSVAEEFQKGNPNVV 263
GF +W P L+ D L +++ + P+ +
Sbjct: 456 KSGFRGPLNWYRNMERNWKWACKSLGRKILIPALMVTAEKDFVLVPQMSQHMEDWIPH-L 514
Query: 264 KLQMIEGAGHMPQEDWPEKVVDGLRYFF 291
K IE GH Q D P +V L +
Sbjct: 515 KRGHIEDCGHWTQMDKPTEVNQILIKWL 542
|
| >3om8_A Probable hydrolase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MES; 2.25A {Pseudomonas aeruginosa} Length = 266 | Back alignment and structure |
|---|
Score = 77.7 bits (192), Expect = 7e-17
Identities = 54/276 (19%), Positives = 94/276 (34%), Gaps = 39/276 (14%)
Query: 25 VRETGSADSRLGTIVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYD 84
R G+A+ + + + + + + ++ F D G G S P Y
Sbjct: 19 YRLDGAAEKP--LLALSNSIGTTLHMWDAQLPALTR-HFRVLRYDARGHGASSVPPGPYT 75
Query: 85 DFDFTENEFHEELDKLLDVLEVKYPFFLVVQGFLVGSY-GLTWALKNPSRISKLAILNSP 143
E++ +LLD LEV+ + G +G G AL P RI +L + N+
Sbjct: 76 LARLG-----EDVLELLDALEVR-RAHFL--GLSLGGIVGQWLALHAPQRIERLVLANT- 126
Query: 144 LTASSPLPGLFQQ-----LRIPLLGEFTAQNA--IMAERFIEAGSPYVLKLDKADVYRLP 196
+A + + L+ + E A +E P V + +R
Sbjct: 127 -SAWLGPAAQWDERIAAVLQAEDMSETAAGFLGNWFPPALLERAEPVV------ERFRAM 179
Query: 197 YLASSGPGFA-LLEAARKVNFKDISSRIGAGFSSGSWDKPVLVAWGISDKYLPQSVAEEF 255
+A++ G A A R + + +RI P LV G D S E
Sbjct: 180 LMATNRHGLAGSFAAVRDTDLRAQLARIER---------PTLVIAGAYDTVTAASHGELI 230
Query: 256 QKGNPNVVKLQMIEGAGHMPQEDWPEKVVDGLRYFF 291
+L + A H+ ++P+ + F
Sbjct: 231 AASIAG-ARLVTLP-AVHLSNVEFPQAFEGAVLSFL 264
|
| >3bwx_A Alpha/beta hydrolase; YP_496220.1, joint center for structural genomics, protein structure initiative, PSI-2; HET: MSE; 1.50A {Novosphingobium aromaticivorans} Length = 285 | Back alignment and structure |
|---|
Score = 77.0 bits (190), Expect = 1e-16
Identities = 46/278 (16%), Positives = 94/278 (33%), Gaps = 41/278 (14%)
Query: 25 VRETGSADSRLGTIVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYD 84
R SR ++ L G ++ + ++ ++++ + P+ G G SD + D
Sbjct: 20 FRAYEGDISRP-PVLCLPGLTRNARDFEDLATRLAG-DWRVLCPEMRGRGDSDYAK---D 74
Query: 85 DFDFTENEFHEELDKLLDVLEVKYPFFLVVQGFLVG-SYG----LTWALKNPSRISKLAI 139
+ ++ ++L+ LL ++ +G S G + A NP+RI+ +
Sbjct: 75 PMTYQPMQYLQDLEALLAQEGIERF-------VAIGTSLGGLLTMLLAAANPARIAAAVL 127
Query: 140 LN-SPLTASSPLPGLFQQLRIP------------LLGEFTAQNAIMAERFIEAGSPYVLK 186
+ P + L + + L + ++
Sbjct: 128 NDVGPEVSPEGLERIRGYVGQGRNFETWMHAARALQESSGDVYPDWDITQWLRYAKRIMV 187
Query: 187 LDKADVYRLPY-LASSGPGFALLEAARKVNFKDISSRIGAGFSSGSWDKPVLVAWGISDK 245
L + Y + + P A + A +V+ + + P+LV G +
Sbjct: 188 LGSSGRIAFDYDMKIAEPFEAPVGATPQVDMWPLFDALATR--------PLLVLRGETSD 239
Query: 246 YLPQSVAEEFQKGNPNVVKLQMIEGAGHMPQEDWPEKV 283
L A + P V+L + GH P D PE +
Sbjct: 240 ILSAQTAAKMAS-RPG-VELVTLPRIGHAPTLDEPESI 275
|
| >3r0v_A Alpha/beta hydrolase fold protein; structural genomics, PSI-biology, protein structure initiati alpha/beta hydrolase; HET: MSE; 1.38A {Sphaerobacter thermophilus} Length = 262 | Back alignment and structure |
|---|
Score = 76.6 bits (189), Expect = 1e-16
Identities = 44/273 (16%), Positives = 76/273 (27%), Gaps = 33/273 (12%)
Query: 24 FVRETGSADSRLGTIVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGY 83
+GS +V + GA S + +++ F D G G S Y
Sbjct: 16 AFERSGSGP----PVVLVGGALSTRAGGAPLAERLA-PHFTVICYDRRGRGDSGDTP-PY 69
Query: 84 DDFDFTENEFHEELDKLLDVLEVKYPFFLVVQGFLVGSYGLTWALKNPSRISKLAILNSP 143
E+L ++D F+ G G+ A + I++LA+ P
Sbjct: 70 AVEREI-----EDLAAIIDAAGG--AAFVF--GMSSGAGLSLLAAASGLPITRLAVFEPP 120
Query: 144 LTASSPLPGLFQQLRIPLLGEFTA-QNAIMAERFIEAG---SPYVLKLDKADVYRLPYLA 199
P + + L + F+ G P ++ + A
Sbjct: 121 YAVDDSRPPVPPDYQTRLDALLAEGRRGDAVTYFMTEGVGVPPDLVAQMQQAPMWPGMEA 180
Query: 200 SSGPGFALLEAA-RKVNFKDISSRIGAGFSSGSWDKPVLVAWGISDKYLPQSVAEEFQKG 258
+ + I P LV G + + A+E
Sbjct: 181 VAHTLPYDHAVMGDNTIPTARFASISI---------PTLVMDGGASPAWIRHTAQELADT 231
Query: 259 NPNVVKLQMIEGAGHMPQEDWPEKVVDGLRYFF 291
PN + +E H P+ + L FF
Sbjct: 232 IPN-ARYVTLENQTHTVA---PDAIAPVLVEFF 260
|
| >3hju_A Monoglyceride lipase; alpha/beta hydrolase, hydrolase, serine esterase; 2.20A {Homo sapiens} Length = 342 | Back alignment and structure |
|---|
Score = 77.4 bits (191), Expect = 2e-16
Identities = 49/271 (18%), Positives = 88/271 (32%), Gaps = 30/271 (11%)
Query: 24 FVRETGSADSRLGTIVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGY 83
F R + I HGA HS Y + + FA D +G G S+
Sbjct: 49 FCRYWKPTGTPKALIFVSHGAGEHSGRYEELARMLMGLDLLVFAHDHVGHGQSEGERMVV 108
Query: 84 DDFDFTENEFHEELDKLLDVLEVKY---PFFLVVQ---GFLVGSYGLTWALKNPSRISKL 137
DF F ++ + +D ++ Y P FL+ G + + A + P +
Sbjct: 109 SDFH----VFVRDVLQHVDSMQKDYPGLPVFLLGHSMGGAIA----ILTAAERPGHFAG- 159
Query: 138 AILNSPLTASSPLPGLFQQLRIPLLGEFTAQNAIMAERFIEAGS--PYVLKLDKADVYRL 195
+L SPL ++P ++ + N + S + + +D
Sbjct: 160 MVLISPLVLANPESATTFKVLAAKVLNLVLPNLSLGPIDSSVLSRNKTEVDIYNSDPLIC 219
Query: 196 PYLASSGPGFALLEAARKVNFKDISSRIGAGFSSGSWDKPVLVAWGISDKYLPQSVAEEF 255
G LL A + + P L+ G +D+ A
Sbjct: 220 RAGLKVCFGIQLLNAV-----SRVERAL------PKLTVPFLLLQGSADRLCDSKGAYLL 268
Query: 256 -QKGNPNVVKLQMIEGAGHMPQEDWPEKVVD 285
+ L++ EGA H+ ++ +V +
Sbjct: 269 MELAKSQDKTLKIYEGAYHVLHKE-LPEVTN 298
|
| >3pe6_A Monoglyceride lipase; alpha-beta hydrolase fold, 2-arachidonyl-glycerol, M associated, hydrolase, hydrolase-hydrolase inhibitor comple; HET: ZYH; 1.35A {Homo sapiens} PDB: 3jw8_A 3jwe_A* Length = 303 | Back alignment and structure |
|---|
Score = 76.6 bits (189), Expect = 3e-16
Identities = 49/271 (18%), Positives = 87/271 (32%), Gaps = 30/271 (11%)
Query: 24 FVRETGSADSRLGTIVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGY 83
F R + I HGA HS Y + + FA D +G G S+
Sbjct: 31 FCRYWAPTGTPKALIFVSHGAGEHSGRYEELARMLMGLDLLVFAHDHVGHGQSEGERMVV 90
Query: 84 DDFDFTENEFHEELDKLLDVLEVKY---PFFLVVQ---GFLVGSYGLTWALKNPSRISKL 137
DF F ++ + +D ++ Y P FL+ G + + A + P +
Sbjct: 91 SDFH----VFVRDVLQHVDSMQKDYPGLPVFLLGHSMGGAIA----ILTAAERPGHFAG- 141
Query: 138 AILNSPLTASSPLPGLFQQLRIPLLGEFTAQNAIMAERFIEAGS--PYVLKLDKADVYRL 195
+L SPL ++P ++ + N S + + +D
Sbjct: 142 MVLISPLVLANPESATTFKVLAAKVLNSVLPNLSSGPIDSSVLSRNKTEVDIYNSDPLIC 201
Query: 196 PYLASSGPGFALLEAARKVNFKDISSRIGAGFSSGSWDKPVLVAWGISDKYLPQSVAEEF 255
G LL A + + P L+ G +D+ A
Sbjct: 202 RAGLKVCFGIQLLNAV-----SRVERAL------PKLTVPFLLLQGSADRLCDSKGAYLL 250
Query: 256 -QKGNPNVVKLQMIEGAGHMPQEDWPEKVVD 285
+ L++ EGA H+ ++ +V +
Sbjct: 251 MELAKSQDKTLKIYEGAYHVLHKE-LPEVTN 280
|
| >2y6u_A Peroxisomal membrane protein LPX1; hydrolase, putative esterase, putative lipase; HET: CME CSO; 1.90A {Saccharomyces cerevisiae} PDB: 2y6v_A* Length = 398 | Back alignment and structure |
|---|
Score = 77.1 bits (189), Expect = 3e-16
Identities = 42/307 (13%), Positives = 89/307 (28%), Gaps = 39/307 (12%)
Query: 20 EYRWFVRETGSADSRLGTIVFLHGAPSHSYSYRNVMSQMSDAGF-------HCFAPDWLG 72
Y R+ S + +VFLHG+ + + ++ A D +
Sbjct: 37 VYTSAERQRRSRTATRLNLVFLHGSGMSKVVWEYYLPRLVAADAEGNYAIDKVLLIDQVN 96
Query: 73 FGFSDKPEKGYDDFDFTENEFHEELDKLLDVLEVKYPFFLVVQGFLVG-SYG----LTWA 127
G S +G +F + ++ K+ E+ ++G S G L
Sbjct: 97 HGDSAVRNRGRLGTNFNWIDGARDVLKIAT-CELGSIDSHPALNVVIGHSMGGFQALACD 155
Query: 128 LKNPSRISKLAILNSPLTASSPLPGLFQQLRIPLLGEFTAQNAIM-------------AE 174
+ P+ L ++ + + L +
Sbjct: 156 VLQPNLFHLLILIEPVVITRKAIGAGRPGLPPDSPQIPENLYNSLRLKTCDHFANESEYV 215
Query: 175 RFIEAGSPY------VLKLDKADVYRLPYLASSGPGFALLEAARKVN---FKDISSRIGA 225
+++ GS + +L+ G + + N + ++ +
Sbjct: 216 KYMRNGSFFTNAHSQILQNIIDFERTKASGDDEDGGPVRTKMEQAQNLLCYMNMQTFAPF 275
Query: 226 GFSS-GSWDKPVLVAWGISDKYLPQSVAEEFQKGNPNVVKLQMIEGAGHM-PQEDWPEKV 283
S+ K + G + P QK N L +I G H+ E P+ V
Sbjct: 276 LISNVKFVRKRTIHIVGARSNWCPPQNQLFLQKTLQN-YHLDVIPGGSHLVNVEA-PDLV 333
Query: 284 VDGLRYF 290
++ + +
Sbjct: 334 IERINHH 340
|
| >3p2m_A Possible hydrolase; alpha/beta hydrolase superfamily; 2.80A {Mycobacterium tuberculosis} Length = 330 | Back alignment and structure |
|---|
Score = 76.0 bits (187), Expect = 5e-16
Identities = 42/270 (15%), Positives = 87/270 (32%), Gaps = 42/270 (15%)
Query: 37 TIVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEE 96
++FLHG +++++ V+ + G A D G G S +D +++ E
Sbjct: 83 RVIFLHGGGQNAHTWDTVIVGL---GEPALAVDLPGHGHSAWR----EDGNYSPQLNSET 135
Query: 97 LDKLLDVLEVKYPFFLVVQGFLVG-SYG----LTWALKNPSRISKLAIL-NSPLTASSPL 150
L +L L F +VG S G + A P + +L ++ +P
Sbjct: 136 LAPVLRELAPGAEF-------VVGMSLGGLTAIRLAAMAPDLVGELVLVDVTPSALQRHA 188
Query: 151 PGLFQQLRIPLLGEFTAQNAIMAERFIEAGSPYVLKLDKADVYRLPYLASSGPGFALLEA 210
Q +A E P + + P+ +
Sbjct: 189 E------------LTAEQRGTVALMHGEREFPSFQAMLDLTIAAAPHRDVKSLRRGVFHN 236
Query: 211 AR---------KVNFKDISSRIGAGFSS-GSWDKPVLVAWGISDKYLPQSVAEEFQKGNP 260
+R + + + + P+ + G S ++ E +
Sbjct: 237 SRRLDNGNWVWRYDAIRTFGDFAGLWDDVDALSAPITLVRGGSSGFVTDQDTAELHRRAT 296
Query: 261 NVVKLQMIEGAGHMPQEDWPEKVVDGLRYF 290
+ + ++E +GH Q D P +++ +R
Sbjct: 297 HFRGVHIVEKSGHSVQSDQPRALIEIVRGV 326
|
| >2qmq_A Protein NDRG2, protein NDR2; alpha/beta-hydrolases fold, NDR family, developmental protei differentiation, neurogenesis, phosphorylation; HET: 2PE; 1.70A {Mus musculus} PDB: 2xmq_A 2xmr_A 2xms_A Length = 286 | Back alignment and structure |
|---|
Score = 75.6 bits (185), Expect = 5e-16
Identities = 38/273 (13%), Positives = 87/273 (31%), Gaps = 21/273 (7%)
Query: 25 VRETGSADSRLGTIVFLHGAP-SHSYSYRNVMS--QMSDAGFHCFAPDWLGFGFSDKPEK 81
G+ + I H ++ ++ + M + + G +
Sbjct: 25 FTVYGTPKPKRPAIFTYHDVGLNYKSCFQPLFRFGDMQEIIQNFVRVHVDAPGMEEGAPV 84
Query: 82 GYDDFDF-TENEFHEELDKLLDVLEVKYPFFLVVQGFLVGSY-GLTWALKNPSRISKLAI 139
+ + + ++ + + +L L + G G+Y +AL +P + L +
Sbjct: 85 FPLGYQYPSLDQLADMIPCILQYLNFSTIIGV---GVGAGAYILSRYALNHPDTVEGLVL 141
Query: 140 LNSPLTASSPLPGLFQQLR--IPLLGEFTAQNAIMAERFIEAGSPYVLKLDKADVYRLPY 197
+N A + +L + + + + ++ + S + YR
Sbjct: 142 INIDPNAKGWMDWAAHKLTGLTSSIPDMILGH-LFSQEELSGNSELI------QKYRGII 194
Query: 198 LASSGPGFALLEAARKVNFKDISSRIGAGFSSGSWDKPVLVAWGISDKYLPQSVAEEFQK 257
+ L N +D++ G + PV++ G + V E K
Sbjct: 195 QHAPNLENIELYWNSYNNRRDLNFERGG---ETTLKCPVMLVVGDQAPHEDAVV-ECNSK 250
Query: 258 GNPNVVKLQMIEGAGHMPQEDWPEKVVDGLRYF 290
+P + +G PQ P K+ + +YF
Sbjct: 251 LDPTQTSFLKMADSGGQPQLTQPGKLTEAFKYF 283
|
| >3bf7_A Esterase YBFF; thioesterase, helical CAP, hydrolase; 1.10A {Escherichia coli} PDB: 3bf8_A Length = 255 | Back alignment and structure |
|---|
Score = 73.2 bits (180), Expect = 2e-15
Identities = 45/268 (16%), Positives = 87/268 (32%), Gaps = 46/268 (17%)
Query: 37 TIVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEE 96
IV +HG + + + + + D G S + ++
Sbjct: 18 PIVLVHGLFGSLDNLGVLARDLVN-DHNIIQVDVRNHGLSPREP------VMNYPAMAQD 70
Query: 97 LDKLLDVLEVKYPFFLVVQGFLVG-SYG----LTWALKNPSRISKLAIL-NSPLTASSP- 149
L LD L++ +G S G + P RI KL + +P+
Sbjct: 71 LVDTLDALQIDKAT-------FIGHSMGGKAVMALTALAPDRIDKLVAIDIAPVDYHVRR 123
Query: 150 LPGLFQQLRIPLLGEFTAQN---AIMAERFIEAGSPYVLKLDKADVYRLPYLASSGPGFA 206
+F + + + AIM + E G + +L S
Sbjct: 124 HDEIFAAINAVSESDAQTRQQAAAIMRQHLNEEG-------------VIQFLLKS----- 165
Query: 207 LLEAARKVNFKDISSRIG--AGFSS-GSWDKPVLVAWGISDKYLPQSVAEEFQKGNPNVV 263
++ + N + + G+ +WD P L G + Y+ + ++ P
Sbjct: 166 FVDGEWRFNVPVLWDQYPHIVGWEKIPAWDHPALFIPGGNSPYVSEQYRDDLLAQFPQA- 224
Query: 264 KLQMIEGAGHMPQEDWPEKVVDGLRYFF 291
+ +I GAGH + P+ V+ +R +
Sbjct: 225 RAHVIAGAGHWVHAEKPDAVLRAIRRYL 252
|
| >2wfl_A Polyneuridine-aldehyde esterase; alkaloid metabolism, monoterpenoid indole alkaloids, PNAE, hydrolase, serine esterase; HET: CME; 2.10A {Rauvolfia serpentina} PDB: 2wfm_A 3gzj_A* Length = 264 | Back alignment and structure |
|---|
Score = 71.1 bits (174), Expect = 1e-14
Identities = 40/268 (14%), Positives = 85/268 (31%), Gaps = 18/268 (6%)
Query: 27 ETGSADSRLGTIVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDF 86
+ + + V +HG ++ + + + AG A D G + + F
Sbjct: 2 HSAANAKQQKHFVLVHGGCLGAWIWYKLKPLLESAGHKVTAVDLSAAGINPRRLDEIHTF 61
Query: 87 DFTENEFHEELDKLLDVLEVKYPFFLVVQGFLVG-SYG---LTWALKN-PSRISKLAILN 141
++ E L +++ + VV L+G S+G L A++ P +IS ++
Sbjct: 62 R----DYSEPLMEVMASIPPDEK---VV---LLGHSFGGMSLGLAMETYPEKISVAVFMS 111
Query: 142 SPLTASSPLPGLFQQLRIPLLGEFTAQNAIMAERFIEAGSPYVLKLDKADVYRLPYLASS 201
+ + + + ++ + + L + + S
Sbjct: 112 AMMPDPNHSLTYPFEKYNEKCPADMMLDSQFSTYGNPENPGMSMILGPQFMALKMFQNCS 171
Query: 202 GPGFALLEA-ARKVNFKDISSRIGAGFSSGSW-DKPVLVAWGISDKYLPQSVAEEFQKGN 259
L + R + FS+ + + DK P + F +
Sbjct: 172 VEDLELAKMLTRPGSLFFQDLAKAKKFSTERYGSVKRAYIFCNEDKSFPVEFQKWFVESV 231
Query: 260 PNVVKLQMIEGAGHMPQEDWPEKVVDGL 287
K++ I+ A HM P +V L
Sbjct: 232 G-ADKVKEIKEADHMGMLSQPREVCKCL 258
|
| >1tqh_A Carboxylesterase precursor; tetrahedral intermediate, alpha/beta hydrolase; 1.63A {Geobacillus stearothermophilus} SCOP: c.69.1.29 PDB: 1r1d_A* 4diu_A Length = 247 | Back alignment and structure |
|---|
Score = 69.8 bits (171), Expect = 3e-14
Identities = 41/260 (15%), Positives = 81/260 (31%), Gaps = 42/260 (16%)
Query: 38 IVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEEL 97
++ LHG +S R + + G+ C AP + G G + D + +++
Sbjct: 19 VLLLHGFTGNSADVRMLGRFLESKGYTCHAPIYKGHGVPPEELVHTGPDD-----WWQDV 73
Query: 98 DKLLDVLEVKYPFFLVVQGF-LVGSYGLTWALKNPSRISKLAILNSPLTASSPLPGLFQQ 156
+ L+ K + V G L G + L P I + + +P+ S
Sbjct: 74 MNGYEFLKNKGYEKIAVAGLSLGGVFSLKLGYTVP--IEGIVTMCAPMYIKSE------- 124
Query: 157 LRIPLLGEFTAQNAIMAERFIEAGSPYVLKLDKADVYRLPYLAS--SGPGFALLEAARKV 214
M E +E Y + K++ + P L
Sbjct: 125 -------------ETMYEGVLEYAREYKKREGKSEEQIEQEMEKFKQTPMKTLKALQE-- 169
Query: 215 NFKDISSRIGAGFSSGSWDKPVLVAWGISDKYLPQSVAEEFQK--GNPNVVKLQMIEGAG 272
D+ + P V D+ + A +P +++ E +G
Sbjct: 170 LIADVRDHLDL------IYAPTFVVQARHDEMINPDSANIIYNEIESPV-KQIKWYEQSG 222
Query: 273 HMPQEDW-PEKVVDGLRYFF 291
H+ D +++ + + F
Sbjct: 223 HVITLDQEKDQLHEDIYAFL 242
|
| >1xkl_A SABP2, salicylic acid-binding protein 2; alpha-beta protein, structural genomics, protein structure initiative, PSI; HET: STH; 2.00A {Nicotiana tabacum} SCOP: c.69.1.20 PDB: 1y7i_A* 1y7h_A* Length = 273 | Back alignment and structure |
|---|
Score = 68.4 bits (167), Expect = 1e-13
Identities = 48/261 (18%), Positives = 80/261 (30%), Gaps = 24/261 (9%)
Query: 37 TIVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEE 96
V +HGA +S+ + + AG A D G + + ++
Sbjct: 6 HFVLVHGACHGGWSWYKLKPLLEAAGHKVTALDLAASGTDLRKIEELRTLY----DYTLP 61
Query: 97 LDKLLDVLEVKYPFFLVVQGFLVGSYG---LTWALKN-PSRISKLAILNSPLTASSPLPG 152
L +L++ L LV S G L A++ P +I L A P
Sbjct: 62 LMELMESLSADEKVILVGH-----SLGGMNLGLAMEKYPQKIYAAVF----LAAFMPDSV 112
Query: 153 LFQQLRIPLLGEFTAQNAIMAERFIEAGSP----YVLKLDKADVYRLPYLASSGPGFALL 208
+ E T + +F+ GSP + + Y S AL
Sbjct: 113 HNSSFVLEQYNERTPAENWLDTQFLPYGSPEEPLTSMFFGPKFLAHKLYQLCSPEDLALA 172
Query: 209 EAA-RKVNFKDISSRIGAGFSSGSW-DKPVLVAWGISDKYLPQSVAEEFQKGNPNVVKLQ 266
+ R + F+ + + DK +P+ V +
Sbjct: 173 SSLVRPSSLFMEDLSKAKYFTDERFGSVKRVYIVCTEDKGIPEEFQRWQIDNIG-VTEAI 231
Query: 267 MIEGAGHMPQEDWPEKVVDGL 287
I+GA HM P+K+ L
Sbjct: 232 EIKGADHMAMLCEPQKLCASL 252
|
| >2xua_A PCAD, 3-oxoadipate ENOL-lactonase; hydrolase, catechol metabolism; 1.90A {Burkholderia xenovorans} Length = 266 | Back alignment and structure |
|---|
Score = 67.3 bits (165), Expect = 3e-13
Identities = 47/281 (16%), Positives = 90/281 (32%), Gaps = 44/281 (15%)
Query: 21 YRWFVRETGSADSRLGTIVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGFGFSDKPE 80
YR G+A IV + + + ++ +S F D G G S+ P+
Sbjct: 16 YRIDGERHGNAP----WIVLSNSLGTDLSMWAPQVAALSK-HFRVLRYDTRGHGHSEAPK 70
Query: 81 KGYDDFDFTENEFHEELDKLLDVLEVKYPFFLVVQGFLVGSY-GLTWALKNPSRISKLAI 139
Y T ++ L+D L++ G +G G+ A ++ RI ++A+
Sbjct: 71 GPYTIEQLT-----GDVLGLMDTLKIA-RANFC--GLSMGGLTGVALAARHADRIERVAL 122
Query: 140 LNSPLTASSPLPGLFQQLRIPLLGEFTAQNA------IMAERFIEAGSPYVLKLDKADVY 193
N+ A P ++ + E A ++E P VL + +
Sbjct: 123 CNT--AARIGSPEVWVPRAVKARTEGMHALADAVLPRWFTADYMER-EPVVLAMIRDVFV 179
Query: 194 RLP---YLASSGPGFALLEAARKVNFKDISSRIGAGFSSGSWDKPVLVAWGISDKYLPQS 250
Y ++ EA + + + I P LV G D +
Sbjct: 180 HTDKEGYASN-------CEAIDAADLRPEAPGIKV---------PALVISGTHDLAATPA 223
Query: 251 VAEEFQKGNPNVVKLQMIEGAGHMPQEDWPEKVVDGLRYFF 291
E + + ++ A H+ + + + F
Sbjct: 224 QGRELAQAIAG-ARYVELD-ASHISNIERADAFTKTVVDFL 262
|
| >3dqz_A Alpha-hydroxynitrIle lyase-like protein; A/B-hydrloase fold, cyanogenesis; 2.50A {Arabidopsis thaliana} Length = 258 | Back alignment and structure |
|---|
Score = 66.9 bits (163), Expect = 4e-13
Identities = 48/257 (18%), Positives = 87/257 (33%), Gaps = 18/257 (7%)
Query: 37 TIVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEE 96
V +H A ++ + + + AG A + G +P + + D E+ +
Sbjct: 6 HFVLVHNAYHGAWIWYKLKPLLESAGHRVTAVELAASGIDPRPIQAVETVD----EYSKP 61
Query: 97 LDKLLDVLEVKYPFFLVVQGFLVGSYG---LTWALKN-PSRISKLAILNSPLTASSPLPG 152
L + L L LV S+G + A P++I L LN+ L ++ +P
Sbjct: 62 LIETLKSLPENEEVILV-----GFSFGGINIALAADIFPAKIKVLVFLNAFLPDTTHVPS 116
Query: 153 LFQQLRIPLLGEFTAQNAIMAERFIEAGSPYVLKLDKADVYRLPYLASSGPGFALLEA-A 211
+ + G + G+ +LK+ + Y + L +
Sbjct: 117 HVLDKYMEMPGGLGD--CEFSSHETRNGTMSLLKMGPKFMKARLYQNCPIEDYELAKMLH 174
Query: 212 RKVNFKDISSRIGAGFSSGSW-DKPVLVAWGISDKYLPQSVAEEFQKGNPNVVKLQMIEG 270
R+ +F FS + + DK +P V K+ I+G
Sbjct: 175 RQGSFFTEDLSKKEKFSEEGYGSVQRVYVMSSEDKAIPCDFIRWMIDNFN-VSKVYEIDG 233
Query: 271 AGHMPQEDWPEKVVDGL 287
HM P+K+ D L
Sbjct: 234 GDHMVMLSKPQKLFDSL 250
|
| >3c6x_A Hydroxynitrilase; atomic resolution, hydroxynitril lyase, catalysis, protonation state, AB initio calculations, substrate bindin; 1.05A {Hevea brasiliensis} SCOP: c.69.1.20 PDB: 1sc9_A 1yas_A* 2g4l_A* 2yas_A 1qj4_A 3c6y_A 3c6z_A 3c70_A 3yas_A 4yas_A 5yas_A* 6yas_A 7yas_A* 1yb6_A* 1yb7_A 1sck_A 1sci_A 1scq_A 1dwo_A 1dwp_A ... Length = 257 | Back alignment and structure |
|---|
Score = 66.2 bits (161), Expect = 7e-13
Identities = 38/254 (14%), Positives = 74/254 (29%), Gaps = 12/254 (4%)
Query: 37 TIVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEE 96
V +H ++ + + + G A D G + + FD E+ E
Sbjct: 5 HFVLIHTICHGAWIWHKLKPLLEALGHKVTALDLAASGVDPRQIEEIGSFD----EYSEP 60
Query: 97 LDKLLDVLEVKYPFFLVVQGFLVGSYGLTWALKN-PSRISKLAILNSPLTASSPLPGLFQ 155
L L+ L LV + G + A +I+ NS L + P
Sbjct: 61 LLTFLEALPPGEKVILVGESC--GGLNIAIAADKYCEKIAAAVFHNSVLPDTEHCPSYVV 118
Query: 156 QLRIPLLGEFTAQNAIMAERFIEAGSPYVLKLDKADVYRLPYLASSGPGFALLEAA-RKV 214
+ + ++ + + LKL + Y + L + RK
Sbjct: 119 DKLMEVFPDWKDTTYFTYTK--DGKEITGLKLGFTLLRENLYTLCGPEEYELAKMLTRKG 176
Query: 215 NFKDISSRIGAGFSSGSW-DKPVLVAWGISDKYLPQSVAEEFQKGNPNVVKLQMIEGAGH 273
+ F+ + + W D+ + K+ +EG H
Sbjct: 177 SLFQNILAKRPFFTKEGYGSIKKIYVWTDQDEIFLPEFQLWQIENYK-PDKVYKVEGGDH 235
Query: 274 MPQEDWPEKVVDGL 287
Q +++ + L
Sbjct: 236 KLQLTKTKEIAEIL 249
|
| >3rm3_A MGLP, thermostable monoacylglycerol lipase; alpha/beta hydrolase fold, hydrolase; 1.20A {Bacillus SP} Length = 270 | Back alignment and structure |
|---|
Score = 65.6 bits (160), Expect = 1e-12
Identities = 36/257 (14%), Positives = 79/257 (30%), Gaps = 37/257 (14%)
Query: 38 IVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEEL 97
++ +HG +S R + + AG+ P G G + D T +++ +
Sbjct: 43 VLLVHGFTGTPHSMRPLAEAYAKAGYTVCLPRLKGHGTHYE-----DMERTTFHDWVASV 97
Query: 98 DKLLDVLEVKYPFFLVVQGFLVGSYGLTWALKNPSRISKLAILNSPLTASSPLPGLFQQL 157
++ L+ + V G +G + ++ I + +N+ + + G+
Sbjct: 98 EEGYGWLKQRCQTIFVT-GLSMGGTLTLYLAEHHPDICGIVPINAAVDIPAIAAGMTGGG 156
Query: 158 RIPLLGEFTAQNAIMAERFIEAGSPYVLKLDKADVYRLPYLASSGPGFALLEAARKVNFK 217
+P GS K Y AS L+ +
Sbjct: 157 ELP-------------RYLDSIGSDLKNPDVKELAYEKTPTASLLQLARLMAQTKA-KLD 202
Query: 218 DISSRIGAGFSSGSWDKPVLVAWGISDKYLPQSVAEEFQK--GNPNVVKLQMIEGAGHMP 275
I P L+ D +P A+ + + ++ + + H+
Sbjct: 203 RIVC-------------PALIFVSDEDHVVPPGNADIIFQGISSTE-KEIVRLRNSYHVA 248
Query: 276 QEDWP-EKVVDGLRYFF 291
D+ +++ FF
Sbjct: 249 TLDYDQPMIIERSLEFF 265
|
| >3sty_A Methylketone synthase 1; alpha/beta hydrolase, decarboxylase, hydrolase; HET: DKA; 1.70A {Lycopersicon hirsutum F} PDB: 3stu_A* 3stt_A* 3stv_A* 3stw_A* 3stx_A* Length = 267 | Back alignment and structure |
|---|
Score = 64.2 bits (156), Expect = 3e-12
Identities = 42/259 (16%), Positives = 88/259 (33%), Gaps = 21/259 (8%)
Query: 37 TIVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEE 96
V +H A ++ + +++ M +G + A D G + K +F ++
Sbjct: 14 HFVLVHAAFHGAWCWYKIVALMRSSGHNVTALDLGASGINPKQALQIPNFS----DYLSP 69
Query: 97 LDKLLDVLEVKYPFFLVVQGFLVGSYG---LTWAL-KNPSRISKLAILNSPLTAS-SPLP 151
L + + L LV + G ++ A+ P +IS L+ +
Sbjct: 70 LMEFMASLPANEKIILVGH-----ALGGLAISKAMETFPEKISVAVFLSGLMPGPNIDAT 124
Query: 152 GLFQQLRIPLLGEFTAQNAIMAERFIEAGSPYVL--KLDKADVYRLPYLASSGPGFALLE 209
+ + +LG+ + + K +VY L + AL+
Sbjct: 125 TVCTKAGSAVLGQLDNC-VTYENGPTNPPTTLIAGPKFLATNVYHLSPIEDLALATALVR 183
Query: 210 AARKVNFKDISSRIGAGFSSGSW-DKPVLVAWGISDKYLPQSVAEEFQKGNPNVVKLQMI 268
+DIS SS + + + L + + + NP +++ I
Sbjct: 184 PLYLYLAEDISKE--VVLSSKRYGSVKRVFIVATENDALKKEFLKLMIEKNP-PDEVKEI 240
Query: 269 EGAGHMPQEDWPEKVVDGL 287
EG+ H+ P+++ L
Sbjct: 241 EGSDHVTMMSKPQQLFTTL 259
|
| >3dkr_A Esterase D; alpha beta hydrolase, mechanism, catalytic triad, rotation; 1.60A {Lactobacillus rhamnosus} PDB: 3dlt_A 3dyi_A 3dyv_A 3e1g_A Length = 251 | Back alignment and structure |
|---|
Score = 63.4 bits (154), Expect = 5e-12
Identities = 35/257 (13%), Positives = 69/257 (26%), Gaps = 39/257 (15%)
Query: 38 IVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEEL 97
+V LH + + +G+ + P + G G + P + + + E
Sbjct: 25 VVLLHAYTGSPNDMNFMARALQRSGYGVYVPLFSGHGTVE-PLDILTKGNP--DIWWAES 81
Query: 98 DKLLDVLEVKYPFFLVVQGFLVGSYGLTWALKNPSRISKLAILNSPLTASSPLPGLFQQL 157
+ + KY V L G + + P + + L L F +
Sbjct: 82 SAAVAHMTAKYAKVFVFGLSLGGIFAMKALETLPGITAGGVFSSPILPGKHHLVPGFLKY 141
Query: 158 RIPLLGEFTAQNAIMAERFIEAGSPYVLKLDKADVYRLPYLASSGPGFALLEAARKVNFK 217
AE + L YL G A+ + A V
Sbjct: 142 ---------------AEYM-----NRLAGKSDESTQILAYLP--GQLAAIDQFATTV--A 177
Query: 218 DISSRIGAGFSSGSWDKPVLVAWGISDKYLPQSVAEEF--QKGNPNVVKLQMIEGAGHM- 274
+ + +P + D+ + +A + N V + A H+
Sbjct: 178 ADLNLV---------KQPTFIGQAGQDELVDGRLAYQLRDALINAARVDFHWYDDAKHVI 228
Query: 275 PQEDWPEKVVDGLRYFF 291
+ + + F
Sbjct: 229 TVNSAHHALEEDVIAFM 245
|
| >2wtm_A EST1E; hydrolase; 1.60A {Clostridium proteoclasticum} PDB: 2wtn_A* Length = 251 | Back alignment and structure |
|---|
Score = 61.6 bits (150), Expect = 2e-11
Identities = 50/268 (18%), Positives = 84/268 (31%), Gaps = 52/268 (19%)
Query: 34 RLGTIVFLHGAPSH--SYSYRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTEN 91
+ + +HG H V +++ G D G G SD F ++
Sbjct: 26 KCPLCIIIHGFTGHSEERHIVAVQETLNEIGVATLRADMYGHGKSDG--------KFEDH 77
Query: 92 EFHEELDKLLDVLEVKYPFFLVVQGFLVG-SYG----LTWALKNPSRISKLAILNSPLTA 146
+ L +L V++ V ++ G S G + A I L L+
Sbjct: 78 TLFKWLTNILAVVDYAKKLDFVTDIYMAGHSQGGLSVMLAAAMERDIIKALIPLSPA--- 134
Query: 147 SSPLPGLFQQLRIPLLGEFTAQNAIMAERFIEAGSPYVLKLDKADVYRLPYLASSGPGFA 206
++ E ++ +F P LD D +L
Sbjct: 135 -------------AMIPEIARTGELLGLKFDPENIPDE--LDAWDGRKL--------KGN 171
Query: 207 LLEAARKVNFKDISSRIGAGFSSGSWDKPVLVAWGISDKYLPQSVAEEFQKGNPNVVKLQ 266
+ A+ + +D + KPVL+ G D+ +P + F K N KL
Sbjct: 172 YVRVAQTIRVEDFVDKY---------TKPVLIVHGDQDEAVPYEASVAFSKQYKN-CKLV 221
Query: 267 MIEGAGHMPQEDWPEKVVDGLRYFFLNY 294
I G H E V + ++ F L
Sbjct: 222 TIPGDTHCYDHH-LELVTEAVKEFMLEQ 248
|
| >1tht_A Thioesterase; 2.10A {Vibrio harveyi} SCOP: c.69.1.13 Length = 305 | Back alignment and structure |
|---|
Score = 61.2 bits (148), Expect = 6e-11
Identities = 35/258 (13%), Positives = 71/258 (27%), Gaps = 36/258 (13%)
Query: 23 WFVRETGSADSRLGTIVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLG-FGFSDKPEK 81
W + + TI+ G + + +S GFH F D L G S
Sbjct: 23 WETPPKENVPFKNNTILIASGFARRMDHFAGLAEYLSTNGFHVFRYDSLHHVGLSSG--- 79
Query: 82 GYDDFDFTENEFHEELDKLLDVLEVKYPFFLVVQGFLVGSYGLTWALKNPSRISKLAILN 141
+FT L + L+ K + + + + + + + + +S L
Sbjct: 80 --SIDEFTMTTGKNSLCTVYHWLQTKGTQNIGLIAASLSA-RVAYEVISDLELSFLITAV 136
Query: 142 SPLTASSPLPGLFQQLRIPLLGEFTAQNAIMAERFIEAGSPYVLKLDKADVYRLPYLASS 201
+ L + L + N + E +V + L
Sbjct: 137 GVVNLRDTLEKALGFDYLSLPID-ELPNDLDFEGHKLGSEVFVRDCFEHHWDTLD----- 190
Query: 202 GPGFALLEAARKVNFKDISSRIGAGFSSGSWDKPVLVAWGISDKYLPQSVAEE-FQKGNP 260
+ L+ + P++ +D ++ Q +
Sbjct: 191 ----STLDKVANTS------------------VPLIAFTANNDDWVKQEEVYDMLAHIRT 228
Query: 261 NVVKLQMIEGAGHMPQED 278
KL + G+ H E+
Sbjct: 229 GHCKLYSLLGSSHDLGEN 246
|
| >3pfb_A Cinnamoyl esterase; alpha/beta hydrolase fold, hydrolase, cinnamoyl/Fe esterase, hydroxycinammates, extracellular; HET: ZYC; 1.58A {Lactobacillus johnsonii} PDB: 3pf9_A* 3pfc_A* 3s2z_A* 3pf8_A 3qm1_A* Length = 270 | Back alignment and structure |
|---|
Score = 59.0 bits (143), Expect = 2e-10
Identities = 44/268 (16%), Positives = 82/268 (30%), Gaps = 52/268 (19%)
Query: 31 ADSRLGTIVFLHGAPSH--SYSYRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDF 88
+ HG ++ + R + + + D D+ G G SD F
Sbjct: 42 FGEIYDMAIIFHGFTANRNTSLLREIANSLRDENIASVRFDFNGHGDSD--------GKF 93
Query: 89 TENEFHEELDKLLDVLEVKYPFFLVVQGFLVG-SYG----LTWALKNPSRISKLAILNSP 143
E++ +L V +LVG + G A P I K+ +L
Sbjct: 94 ENMTVLNEIEDANAILNYVKTDPHVRNIYLVGHAQGGVVASMLAGLYPDLIKKVVLL--- 150
Query: 144 LTASSPLPGLFQQLRIPLLGEFTAQNAIMAERFIEAGSPYVLKLDKADVYRLPYLASSGP 203
+P L T + +R L
Sbjct: 151 ----APAATLKGDALEGNTQGVTYNPDHIPDRL--PFKDLTLGG---------------- 188
Query: 204 GFALLEAARKVNFKDISSRIGAGFSSGSWDKPVLVAWGISDKYLPQSVAEEFQKGNPNVV 263
L A+++ ++S++ KPV + G D + + ++++ + N
Sbjct: 189 --FYLRIAQQLPIYEVSAQF---------TKPVCLIHGTDDTVVSPNASKKYDQIYQNS- 236
Query: 264 KLQMIEGAGHMPQEDWPEKVVDGLRYFF 291
L +IEGA H + + + V+ F
Sbjct: 237 TLHLIEGADHCFSDSYQKNAVNLTTDFL 264
|
| >1ufo_A Hypothetical protein TT1662; alpha-beta fold, hydrolase, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.60A {Thermus thermophilus} SCOP: c.69.1.27 Length = 238 | Back alignment and structure |
|---|
Score = 55.1 bits (132), Expect = 4e-09
Identities = 40/274 (14%), Positives = 76/274 (27%), Gaps = 71/274 (25%)
Query: 32 DSRLGTIVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTEN 91
++ ++ LHG ++ ++ GF A D G + P + E
Sbjct: 21 EAPKALLLALHGLQGSKEHILALLPGYAERGFLLLAFDAPRHGEREGPPPSSKSPRYVEE 80
Query: 92 ------EFHEELDKLLDVLEVKYPFFLVVQGFLVGSYGLTWALKNPSRISKLAILNSPLT 145
F EE ++ + E ++ L + G +G++ L R +
Sbjct: 81 VYRVALGFKEEARRVAEEAERRFGLPLFLAGGSLGAFVAHLLLAEGFRPRGVLAF----- 135
Query: 146 ASSPLPGLFQQLRIPLLGEFTAQNAIMAERFIEAGSPYVLKLDKADVYRLPYLASSGPGF 205
GS + +KL + V P +
Sbjct: 136 ---------------------------------IGSGFPMKLPQGQVVEDPGV------L 156
Query: 206 ALLEAARKVNFKDISSRIGAGFSSGSWDKPVLVAWGISDKYLPQSVAEEFQK-----GNP 260
AL +A + P+L G D +P + E+ +
Sbjct: 157 ALYQAPPATRGEAYGGV------------PLLHLHGSRDHIVPLARMEKTLEALRPHYPE 204
Query: 261 NVVKLQMIEGAGHMPQEDWPEKVVDGLRYFFLNY 294
+ + EGAGH + F ++
Sbjct: 205 GRLARFVEEGAGHTLTPLMARVGLA----FLEHW 234
|
| >2fx5_A Lipase; alpha-beta hydrolase; HET: TLA; 1.80A {Pseudomonas mendocina} Length = 258 | Back alignment and structure |
|---|
Score = 51.2 bits (122), Expect = 1e-07
Identities = 21/141 (14%), Positives = 43/141 (30%), Gaps = 9/141 (6%)
Query: 23 WFVRETGSADSRLGTIVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKG 82
+ R+ G R I++ +G + +Y ++S + GF A + G
Sbjct: 37 YRPRDLGQGGVRHPVILWGNGTGAGPSTYAGLLSHWASHGFVVAAAETSNAGTG------ 90
Query: 83 YDDFDFTENEFHEELDKLLDVLEVK-YPFFLVVQGFLVGSYGLTWALKNPSRISKLAILN 141
+ + E D K + G G G A ++ R+ A +
Sbjct: 91 -REMLACLDYLVRENDTPYGTYSGKLNTGRVGTSGHSQGGGGSIMAGQDT-RVRTTAPIQ 148
Query: 142 SPLTASSPLPGLFQQLRIPLL 162
++ + P+
Sbjct: 149 PYTLGLGHDSASQRRQQGPMF 169
|
| >1azw_A Proline iminopeptidase; aminopeptidase, serine protease, xanthomonas campestris; 2.70A {Xanthomonas citri} SCOP: c.69.1.7 Length = 313 | Back alignment and structure |
|---|
Score = 48.7 bits (115), Expect = 9e-07
Identities = 49/286 (17%), Positives = 86/286 (30%), Gaps = 42/286 (14%)
Query: 24 FVRETGSADSRLGTIVFLHGAP--SHSYSYRNVMSQMSDAGFHCFAPDWLGFGFSDKPEK 81
+ + G+ + +V LHG P + R A + D G G S
Sbjct: 25 YFEQCGNPHGKP--VVMLHGGPGGGCNDKMR---RFHDPAKYRIVLFDQRGSGRSTPHA- 78
Query: 82 GYDDFDFTENEFHEELDKLLDVLEVKYPFFLVVQGFLVGSYGLTWALKNPSRISKLAILN 141
D D T + ++++L L V + V G + L +A +P ++++L +
Sbjct: 79 --DLVDNTTWDLVADIERLRTHLGVDR--WQVFGGSWGSTLALAYAQTHPQQVTELVLRG 134
Query: 142 SPLTASSPLPGLFQQLR---IPLLGEFTAQNAIMAERFIEAGSPYVLKLDKADVYRLPY- 197
L L +Q+ P E ER + + + RL
Sbjct: 135 IFLLRRFELEWFYQEGASRLFPDAWEHYLNAIPPVERADLMSAFHRRLTSDDEATRLAAA 194
Query: 198 ---------LASSGPGFALLEAARKVNFKDISSRIGAGFSSGSW---------------- 232
+ + +F +RI +
Sbjct: 195 KAWSVWEGATSFLHVDEDFVTGHEDAHFALAFARIENHYFVNGGFFEVEDQLLRDAHRIA 254
Query: 233 DKPVLVAWGISDKYLPQSVAEEFQKGNPNVVKLQMIEGAGHMPQED 278
D P ++ G D P A + K P +LQ+ +GH E
Sbjct: 255 DIPGVIVHGRYDVVCPLQSAWDLHKAWPK-AQLQISPASGHSAFEP 299
|
| >3ksr_A Putative serine hydrolase; catalytic triad, structural genomics, JOIN for structural genomics, JCSG; 2.69A {Xanthomonas campestris PV} Length = 290 | Back alignment and structure |
|---|
Score = 47.9 bits (114), Expect = 1e-06
Identities = 35/268 (13%), Positives = 67/268 (25%), Gaps = 73/268 (27%)
Query: 37 TIVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEE 96
++F+HG + + G C D G +
Sbjct: 30 GVLFVHGWGGSQHHSLVRAREAVGLGCICMTFDLRGHEGYAS--------MRQSVTRAQN 81
Query: 97 LDKLLDVLEVKYPFFLVVQGF-------LVG-SYG--LTWALKNPSRISKLAILNSPLTA 146
LD + + L + +VG SYG L+ L + LA+ + L
Sbjct: 82 LDDIKAAYD-----QLASLPYVDAHSIAVVGLSYGGYLSALLTRERPVEWLALRSPALY- 135
Query: 147 SSPLPGLFQQLRIPLLGEFTAQNAIMAERFIEAGSPYVLKLDKADVYRLPYLASSGPGFA 206
+ Q ++ L + +
Sbjct: 136 ---KDAHWDQPKVSLNADPDLMDYRRRALAPGDNLA------------------------ 168
Query: 207 LLEAARKVNFKDISSRIGAGFSSGSWDKPVLVAWGISDKYLPQSVAEEFQK--GNPNVVK 264
L A + VL+ +D +P V + N +
Sbjct: 169 -LAACAQYK------------------GDVLLVEAENDVIVPHPVMRNYADAFTNARSLT 209
Query: 265 LQMIEGAGHM-PQEDWPEKVVDGLRYFF 291
++I GA H ++ ++ L +
Sbjct: 210 SRVIAGADHALSVKEHQQEYTRALIDWL 237
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 44.5 bits (104), Expect = 3e-05
Identities = 48/377 (12%), Positives = 82/377 (21%), Gaps = 161/377 (42%)
Query: 34 RLGTIVFLHGAPSHSYSYRNVM----------SQMSDAGFHCFAPD---WLGFGFSDKPE 80
R V + G + C WL + PE
Sbjct: 148 RPAKNVLIDG-----------VLGSGKTWVALDVCLSYKVQCKMDFKIFWLNLKNCNSPE 196
Query: 81 ---------------KGYDDFDFTEN---EFHEELDKLLDVLEVK-YPFFL--------- 112
D + N H +L +L+ K Y L
Sbjct: 197 TVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVLLNVQNA 256
Query: 113 -VVQGFLVG-----------------------------SYGLT----------WALKNPS 132
F + S LT + P
Sbjct: 257 KAWNAFNLSCKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQ 316
Query: 133 RISKLAILNSPLTASSPLPGLFQQLRIPLLGEFTAQNAIMAERFIEAGSPYVL--KLDKA 190
+ + + +P + ++ E + + +V KL
Sbjct: 317 DLPREVLTTNPRR-------------LSIIAESIRDGLATWDNW-----KHVNCDKLTTI 358
Query: 191 DVYRLPYLASSGPGFALLEAA--RKVNFKDISSRIGAGFSSGSWDKP-VL-VAWGISDKY 246
+ SS +LE A RK F +S + F + +L + W K
Sbjct: 359 -------IESS---LNVLEPAEYRK-MFDRLS--V---FPPSAHIPTILLSLIWFDVIKS 402
Query: 247 LPQSVAEEFQK-------GNPNVVKLQMI----------EGAGH------------MPQE 277
V + K + + + I E A H +
Sbjct: 403 DVMVVVNKLHKYSLVEKQPKESTISIPSIYLELKVKLENEYALHRSIVDHYNIPKTFDSD 462
Query: 278 DWPEKVVDGLRYFFLNY 294
D +D Y + +
Sbjct: 463 DLIPPYLDQYFYSHIGH 479
|
| >2rau_A Putative esterase; NP_343859.1, putative lipase, structural genomics, joint CEN structural genomics, JCSG; HET: PG4 UNL; 1.85A {Sulfolobus solfataricus P2} Length = 354 | Back alignment and structure |
|---|
Score = 43.4 bits (101), Expect = 4e-05
Identities = 17/128 (13%), Positives = 47/128 (36%), Gaps = 12/128 (9%)
Query: 38 IVFLHGAPSHSYSY-RNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDF--DFTENEFH 94
+ +G Y ++++ ++ GF+ + D+ + F ++ + +
Sbjct: 68 TISWNGVHYTIPDYRKSIVLYLARNGFNVYTIDYRTHYVPPFLKDRQLSFTANWGWSTWI 127
Query: 95 EELDKLLDVLEVKYPFFLVVQGFLVG-SYGLTWALK-----NPSRISKLAILNSPLTASS 148
++ +++ ++ + +L G S+G AL + I L +L+ T
Sbjct: 128 SDIKEVVSFIKRDSGQERI---YLAGESFGGIAALNYSSLYWKNDIKGLILLDGGPTKHG 184
Query: 149 PLPGLFQQ 156
P +
Sbjct: 185 IRPKFYTP 192
|
| >2hdw_A Hypothetical protein PA2218; alpha/beta hydrolase fold, structural genomics, PSI, structure initiative; 2.00A {Pseudomonas aeruginosa} Length = 367 | Back alignment and structure |
|---|
Score = 42.4 bits (99), Expect = 9e-05
Identities = 44/283 (15%), Positives = 80/283 (28%), Gaps = 17/283 (6%)
Query: 23 WFVRETGSADSRLGTIVFLHG-APSHSYSYRNVMSQMSDAGFHCFAPDWLGFGFSDKPEK 81
RL IV S M++ GF A D G S +
Sbjct: 84 DLYLPKNRGGDRLPAIVIGGPFGAVKEQSSGLYAQTMAERGFVTLAFDPSYTGESGGQPR 143
Query: 82 GYDDFDFTENEFHEELDKLLDVLEVKYPFFLVVQGFLVGSYGLTWALKNPSRISKLAILN 141
D +F +D + + EV + V G A+ R+ +
Sbjct: 144 NVASPDINTEDFSAAVDFISLLPEVN-RERIGVIGICGWGGMALNAVAVDKRVKAVVTST 202
Query: 142 SPLTASSPLPGLFQQLRIPLLGEFTAQNAIMAERFIEAGSPYV------LKLDKADVYRL 195
G + + Q + E+G+P LK +A
Sbjct: 203 MYDMTRVMSKGYNDSVTLEQRTRTLEQLGQQRWKDAESGTPAYQPPYNELKGGEAQFLVD 262
Query: 196 PYLASSGPGFALLEAARKVNFKDISSRIG-AGFSSGSW-----DKPVLVAWGISDKYLPQ 249
+ P A N +++ + ++ +P+L+ G
Sbjct: 263 YHDYYMTPRGYHPRAVNSGNAWTMTTPLSFMNMPILTYIKEISPRPILLIHGERAHSRYF 322
Query: 250 SVAEEFQKGNPNVVKLQMIEGAGHMPQEDWPEKV-VDGLRYFF 291
S + +L ++ GA H+ D +++ D + FF
Sbjct: 323 S-ETAYAAAAEP-KELLIVPGASHVDLYDRLDRIPFDRIAGFF 363
|
| >1wm1_A Proline iminopeptidase; complex with inhibitor, hydrolase; HET: PTB; 2.10A {Serratia marcescens} SCOP: c.69.1.7 PDB: 1qtr_A* 1x2b_A* 1x2e_A* Length = 317 | Back alignment and structure |
|---|
Score = 40.5 bits (94), Expect = 4e-04
Identities = 50/285 (17%), Positives = 90/285 (31%), Gaps = 43/285 (15%)
Query: 24 FVRETGSADSRLGTIVFLHGAP--SHSYSYRNVMSQMSD-AGFHCFAPDWLGFGFSDKPE 80
+ +G+ + + VF+HG P S +R Q+ D + D G G S
Sbjct: 28 YWELSGNPNGKP--AVFIHGGPGGGISPHHR----QLFDPERYKVLLFDQRGCGRSRPHA 81
Query: 81 KGYDDFDFTENEFHEELDKLLDVLEVKYPFFLVVQGFLVGSYGLTWALKNPSRISKLAIL 140
+ T ++++L ++ V+ +LV G + L +A +P R+S++ +
Sbjct: 82 ---SLDNNTTWHLVADIERLREMAGVEQ--WLVFGGSWGSTLALAYAQTHPERVSEMVLR 136
Query: 141 NSPLTASSPLPGLFQ---QLRIPLLGEFTAQNAIMAERFIEAGSPYVLKLDKADVYRLPY 197
L +Q P E ER + +L
Sbjct: 137 GIFTLRKQRLHWYYQDGASRFFPEKWERVLSILSDDERKDVIAAYRQRLTSADPQVQLEA 196
Query: 198 LAS----SGPGFALLEAARKVNFKDISSRIGA------GFSSGSW--------------- 232
G LL + +F + + F+ +
Sbjct: 197 AKLWSVWEGETVTLLPSRESASFGEDDFALAFARIENHYFTHLGFLESDDQLLRNVPLIR 256
Query: 233 DKPVLVAWGISDKYLPQSVAEEFQKGNPNVVKLQMIEGAGHMPQE 277
P ++ G D A + K P +L ++EGAGH E
Sbjct: 257 HIPAVIVHGRYDMACQVQNAWDLAKAWPEA-ELHIVEGAGHSYDE 300
|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 295 | |||
| 3om8_A | 266 | Probable hydrolase; structural genomics, PSI-2, pr | 100.0 | |
| 3afi_E | 316 | Haloalkane dehalogenase; A/B-hydrolase, hydrolase; | 100.0 | |
| 1b6g_A | 310 | Haloalkane dehalogenase; hydrolase, alpha/beta-hyd | 100.0 | |
| 1iup_A | 282 | META-cleavage product hydrolase; aromatic compound | 100.0 | |
| 2xua_A | 266 | PCAD, 3-oxoadipate ENOL-lactonase; hydrolase, cate | 100.0 | |
| 3ia2_A | 271 | Arylesterase; alpha-beta hydrolase fold, transitio | 100.0 | |
| 3fob_A | 281 | Bromoperoxidase; structural genomics, IDP00046, ba | 100.0 | |
| 3v48_A | 268 | Aminohydrolase, putative aminoacrylate hydrolase R | 100.0 | |
| 2xt0_A | 297 | Haloalkane dehalogenase; hydrolase, alpha-beta hyd | 100.0 | |
| 2wue_A | 291 | 2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoate hydrolas | 100.0 | |
| 1zoi_A | 276 | Esterase; alpha/beta hydrolase fold; 1.60A {Pseudo | 100.0 | |
| 3nwo_A | 330 | PIP, proline iminopeptidase; structural genomics, | 100.0 | |
| 2yys_A | 286 | Proline iminopeptidase-related protein; TTHA1809, | 100.0 | |
| 2psd_A | 318 | Renilla-luciferin 2-monooxygenase; alpha/beta-hydr | 100.0 | |
| 1ehy_A | 294 | Protein (soluble epoxide hydrolase); alpha/beta hy | 100.0 | |
| 2puj_A | 286 | 2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoate hydrola; | 100.0 | |
| 1a88_A | 275 | Chloroperoxidase L; haloperoxidase, oxidoreductase | 100.0 | |
| 1brt_A | 277 | Bromoperoxidase A2; haloperoxidase, oxidoreductase | 100.0 | |
| 1a8q_A | 274 | Bromoperoxidase A1; haloperoxidase, oxidoreductase | 100.0 | |
| 1a8s_A | 273 | Chloroperoxidase F; haloperoxidase, oxidoreductase | 100.0 | |
| 2wj6_A | 276 | 1H-3-hydroxy-4-oxoquinaldine 2,4-dioxygenase; oxid | 100.0 | |
| 1q0r_A | 298 | RDMC, aclacinomycin methylesterase; anthracycline, | 100.0 | |
| 1u2e_A | 289 | 2-hydroxy-6-ketonona-2,4-dienedioic acid hydrolase | 100.0 | |
| 1hkh_A | 279 | Gamma lactamase; hydrolase, alpha/beta hydrolase, | 100.0 | |
| 3bf7_A | 255 | Esterase YBFF; thioesterase, helical CAP, hydrolas | 100.0 | |
| 3kda_A | 301 | CFTR inhibitory factor (CIF); alpha/beta hydrolase | 100.0 | |
| 3bwx_A | 285 | Alpha/beta hydrolase; YP_496220.1, joint center fo | 100.0 | |
| 2cjp_A | 328 | Epoxide hydrolase; HET: PG4 VPR; 1.95A {Solanum tu | 100.0 | |
| 2ocg_A | 254 | Valacyclovir hydrolase; alpha beta hydrolase fold; | 100.0 | |
| 2xmz_A | 269 | Hydrolase, alpha/beta hydrolase fold family; menaq | 100.0 | |
| 1j1i_A | 296 | META cleavage compound hydrolase; carbazole degrad | 100.0 | |
| 1c4x_A | 285 | BPHD, protein (2-hydroxy-6-OXO-6-phenylhexa-2,4-di | 100.0 | |
| 3c6x_A | 257 | Hydroxynitrilase; atomic resolution, hydroxynitril | 100.0 | |
| 3g9x_A | 299 | Haloalkane dehalogenase; alpha/beta hydrolase, hel | 100.0 | |
| 2qvb_A | 297 | Haloalkane dehalogenase 3; RV2579, alpha-beta hydr | 100.0 | |
| 1xkl_A | 273 | SABP2, salicylic acid-binding protein 2; alpha-bet | 100.0 | |
| 2wfl_A | 264 | Polyneuridine-aldehyde esterase; alkaloid metaboli | 100.0 | |
| 3oos_A | 278 | Alpha/beta hydrolase family protein; APC67239.0, p | 100.0 | |
| 1wom_A | 271 | RSBQ, sigma factor SIGB regulation protein RSBQ; a | 100.0 | |
| 3u1t_A | 309 | DMMA haloalkane dehalogenase; alpha/beta-hydrolase | 100.0 | |
| 1mtz_A | 293 | Proline iminopeptidase; alpha-beta hydrolase, CAP | 99.98 | |
| 1mj5_A | 302 | 1,3,4,6-tetrachloro-1,4-cyclohexadiene hydrolase; | 99.98 | |
| 3ibt_A | 264 | 1H-3-hydroxy-4-oxoquinoline 2,4-dioxygenase; QDO, | 99.98 | |
| 4f0j_A | 315 | Probable hydrolytic enzyme; alpha/beta hydrolase f | 99.98 | |
| 1m33_A | 258 | BIOH protein; alpha-betta-alpha sandwich, structur | 99.97 | |
| 3qyj_A | 291 | ALR0039 protein; alpha/beta fold, hydrolase; 1.78A | 99.97 | |
| 3r0v_A | 262 | Alpha/beta hydrolase fold protein; structural geno | 99.97 | |
| 3qit_A | 286 | CURM TE, polyketide synthase; thioesterase, alpha/ | 99.97 | |
| 3dqz_A | 258 | Alpha-hydroxynitrIle lyase-like protein; A/B-hydrl | 99.97 | |
| 3fsg_A | 272 | Alpha/beta superfamily hydrolase; PF00561, MCSG, P | 99.97 | |
| 2e3j_A | 356 | Epoxide hydrolase EPHB; epoxide hydrolase B, struc | 99.97 | |
| 2wtm_A | 251 | EST1E; hydrolase; 1.60A {Clostridium proteoclastic | 99.97 | |
| 3r40_A | 306 | Fluoroacetate dehalogenase; FACD, defluorinase, al | 99.97 | |
| 4fbl_A | 281 | LIPS lipolytic enzyme; thermostable, structural ge | 99.97 | |
| 3sty_A | 267 | Methylketone synthase 1; alpha/beta hydrolase, dec | 99.97 | |
| 3i1i_A | 377 | Homoserine O-acetyltransferase; structural genomic | 99.97 | |
| 3hss_A | 293 | Putative bromoperoxidase; alpha beta hydrolase, ox | 99.97 | |
| 1tqh_A | 247 | Carboxylesterase precursor; tetrahedral intermedia | 99.97 | |
| 2qmq_A | 286 | Protein NDRG2, protein NDR2; alpha/beta-hydrolases | 99.97 | |
| 1r3d_A | 264 | Conserved hypothetical protein VC1974; structural | 99.97 | |
| 4g9e_A | 279 | AHL-lactonase, alpha/beta hydrolase fold protein; | 99.97 | |
| 4dnp_A | 269 | DAD2; alpha/beta hydrolase, hydrolase; 2.15A {Petu | 99.97 | |
| 1wm1_A | 317 | Proline iminopeptidase; complex with inhibitor, hy | 99.97 | |
| 2r11_A | 306 | Carboxylesterase NP; 2632844, putative hydrolase, | 99.97 | |
| 3pe6_A | 303 | Monoglyceride lipase; alpha-beta hydrolase fold, 2 | 99.97 | |
| 3kxp_A | 314 | Alpha-(N-acetylaminomethylene)succinic acid hydrol | 99.97 | |
| 2pl5_A | 366 | Homoserine O-acetyltransferase; alpha/beta hydrola | 99.97 | |
| 3hju_A | 342 | Monoglyceride lipase; alpha/beta hydrolase, hydrol | 99.96 | |
| 3vdx_A | 456 | Designed 16NM tetrahedral protein CAGE containing | 99.96 | |
| 3i28_A | 555 | Epoxide hydrolase 2; aromatic hydrocarbons catabol | 99.96 | |
| 1azw_A | 313 | Proline iminopeptidase; aminopeptidase, serine pro | 99.96 | |
| 3p2m_A | 330 | Possible hydrolase; alpha/beta hydrolase superfami | 99.96 | |
| 2y6u_A | 398 | Peroxisomal membrane protein LPX1; hydrolase, puta | 99.96 | |
| 3pfb_A | 270 | Cinnamoyl esterase; alpha/beta hydrolase fold, hyd | 99.96 | |
| 3e0x_A | 245 | Lipase-esterase related protein; APC60309, clostri | 99.96 | |
| 3c5v_A | 316 | PME-1, protein phosphatase methylesterase 1; demet | 99.96 | |
| 3qvm_A | 282 | OLEI00960; structural genomics, PSI-biology, midwe | 99.96 | |
| 1tht_A | 305 | Thioesterase; 2.10A {Vibrio harveyi} SCOP: c.69.1. | 99.96 | |
| 2b61_A | 377 | Homoserine O-acetyltransferase; acyl-enzyme, aspar | 99.96 | |
| 4i19_A | 388 | Epoxide hydrolase; structural genomics, PSI-biolog | 99.96 | |
| 2vat_A | 444 | Acetyl-COA--deacetylcephalosporin C acetyltransfer | 99.96 | |
| 3b12_A | 304 | Fluoroacetate dehalogenase; dehalogease, hydrolase | 99.93 | |
| 3llc_A | 270 | Putative hydrolase; structural genomics, joint cen | 99.95 | |
| 3g02_A | 408 | Epoxide hydrolase; alpha/beta hydrolase fold, enan | 99.95 | |
| 1k8q_A | 377 | Triacylglycerol lipase, gastric; APHA beta hydrola | 99.95 | |
| 3l80_A | 292 | Putative uncharacterized protein SMU.1393C; alpha/ | 99.95 | |
| 3rm3_A | 270 | MGLP, thermostable monoacylglycerol lipase; alpha/ | 99.95 | |
| 1imj_A | 210 | CIB, CCG1-interacting factor B; alpha/beta hydrola | 99.94 | |
| 3bdi_A | 207 | Uncharacterized protein TA0194; NP_393672.1, predi | 99.94 | |
| 1pja_A | 302 | Palmitoyl-protein thioesterase 2 precursor; hydrol | 99.94 | |
| 3fla_A | 267 | RIFR; alpha-beta hydrolase thioesterase, hydrolase | 99.94 | |
| 3dkr_A | 251 | Esterase D; alpha beta hydrolase, mechanism, catal | 99.94 | |
| 3qmv_A | 280 | Thioesterase, REDJ; alpha/beta hydrolase fold, hyd | 99.93 | |
| 2i3d_A | 249 | AGR_C_3351P, hypothetical protein ATU1826; structu | 99.92 | |
| 3ksr_A | 290 | Putative serine hydrolase; catalytic triad, struct | 99.92 | |
| 1ufo_A | 238 | Hypothetical protein TT1662; alpha-beta fold, hydr | 99.92 | |
| 2rau_A | 354 | Putative esterase; NP_343859.1, putative lipase, s | 99.91 | |
| 1qlw_A | 328 | Esterase; anisotropic refinement, atomic resolutio | 99.91 | |
| 3trd_A | 208 | Alpha/beta hydrolase; cellular processes; 1.50A {C | 99.91 | |
| 3ils_A | 265 | PKS, aflatoxin biosynthesis polyketide synthase; A | 99.91 | |
| 2q0x_A | 335 | Protein DUF1749, uncharacterized protein; alpha/be | 99.91 | |
| 2qjw_A | 176 | Uncharacterized protein XCC1541; putative hydrolas | 99.9 | |
| 2qs9_A | 194 | Retinoblastoma-binding protein 9; B5T overexpresse | 99.9 | |
| 3h04_A | 275 | Uncharacterized protein; protein with unknown func | 99.9 | |
| 2o2g_A | 223 | Dienelactone hydrolase; YP_324580.1, structural ge | 99.9 | |
| 1jfr_A | 262 | Lipase; serine hydrolase; 1.90A {Streptomyces exfo | 99.89 | |
| 1isp_A | 181 | Lipase; alpha/beta hydrolase fold, hydrolase; 1.30 | 99.89 | |
| 3fcy_A | 346 | Xylan esterase 1; alpha/beta hydrolase, carbohydra | 99.89 | |
| 2k2q_B | 242 | Surfactin synthetase thioesterase subunit; A/B-hyd | 99.89 | |
| 1zi8_A | 236 | Carboxymethylenebutenolidase; alpha and beta prote | 99.88 | |
| 2fuk_A | 220 | XC6422 protein; A/B hydrolase, structural genomics | 99.88 | |
| 1uxo_A | 192 | YDEN protein; hydrolase, A/B hydrolase, esterase, | 99.88 | |
| 3lcr_A | 319 | Tautomycetin biosynthetic PKS; alpha-beta hydrolas | 99.88 | |
| 3fnb_A | 405 | Acylaminoacyl peptidase SMU_737; alpha-beta-alpha | 99.87 | |
| 1kez_A | 300 | Erythronolide synthase; polyketide synthase, modul | 99.87 | |
| 2jbw_A | 386 | Dhpon-hydrolase, 2,6-dihydroxy-pseudo-oxynicotine | 99.87 | |
| 2h1i_A | 226 | Carboxylesterase; structural genomics, PSI-2, prot | 99.87 | |
| 3bdv_A | 191 | Uncharacterized protein DUF1234; DUF1234 family pr | 99.86 | |
| 1auo_A | 218 | Carboxylesterase; hydrolase; 1.80A {Pseudomonas fl | 99.86 | |
| 1fj2_A | 232 | Protein (acyl protein thioesterase 1); alpha/beta | 99.86 | |
| 3vis_A | 306 | Esterase; alpha/beta-hydrolase fold, polyethylene | 99.86 | |
| 2pbl_A | 262 | Putative esterase/lipase/thioesterase; alpha/beta- | 99.85 | |
| 3cn9_A | 226 | Carboxylesterase; alpha/beta hydrolase fold super- | 99.85 | |
| 3f67_A | 241 | Putative dienelactone hydrolase; alpha-beta-alpha | 99.84 | |
| 1l7a_A | 318 | Cephalosporin C deacetylase; structural genomics, | 99.84 | |
| 4fle_A | 202 | Esterase; structural genomics, PSI-biology, northe | 99.83 | |
| 2hdw_A | 367 | Hypothetical protein PA2218; alpha/beta hydrolase | 99.83 | |
| 2r8b_A | 251 | AGR_C_4453P, uncharacterized protein ATU2452; APC6 | 99.83 | |
| 3bjr_A | 283 | Putative carboxylesterase; structural genomics, jo | 99.82 | |
| 1vkh_A | 273 | Putative serine hydrolase; structural genomics, jo | 99.82 | |
| 3o4h_A | 582 | Acylamino-acid-releasing enzyme; alpha/beta hydrol | 99.82 | |
| 3hxk_A | 276 | Sugar hydrolase; alpha-beta protein., structural g | 99.82 | |
| 3og9_A | 209 | Protein YAHD A copper inducible hydrolase; alpha/b | 99.81 | |
| 3mve_A | 415 | FRSA, UPF0255 protein VV1_0328; FRSA,fermentation/ | 99.81 | |
| 3d7r_A | 326 | Esterase; alpha/beta fold, hydrolase; 2.01A {Staph | 99.81 | |
| 2c7b_A | 311 | Carboxylesterase, ESTE1; carboxyesterase, thermoph | 99.81 | |
| 3bxp_A | 277 | Putative lipase/esterase; putative carboxylesteras | 99.81 | |
| 3k2i_A | 422 | Acyl-coenzyme A thioesterase 4; alpha/beta hydrola | 99.8 | |
| 2z3z_A | 706 | Dipeptidyl aminopeptidase IV; peptidase family S9, | 99.8 | |
| 1vlq_A | 337 | Acetyl xylan esterase; TM0077, structural genomics | 99.8 | |
| 3tej_A | 329 | Enterobactin synthase component F; nonribosomal pe | 99.79 | |
| 3lp5_A | 250 | Putative cell surface hydrolase; structural genom | 99.79 | |
| 2fx5_A | 258 | Lipase; alpha-beta hydrolase; HET: TLA; 1.80A {Pse | 99.79 | |
| 3hlk_A | 446 | Acyl-coenzyme A thioesterase 2, mitochondrial; alp | 99.78 | |
| 2o7r_A | 338 | CXE carboxylesterase; alpha/beta hydrolase; 1.40A | 99.78 | |
| 3b5e_A | 223 | MLL8374 protein; NP_108484.1, carboxylesterase, st | 99.78 | |
| 2ecf_A | 741 | Dipeptidyl peptidase IV; prolyl oligopeptidase fam | 99.77 | |
| 3azo_A | 662 | Aminopeptidase; POP family, hydrolase; 2.00A {Stre | 99.77 | |
| 1jji_A | 311 | Carboxylesterase; alpha-beta hydrolase fold, hydro | 99.77 | |
| 2wir_A | 313 | Pesta, alpha/beta hydrolase fold-3 domain protein; | 99.76 | |
| 2hfk_A | 319 | Pikromycin, type I polyketide synthase pikaiv; alp | 99.76 | |
| 3u0v_A | 239 | Lysophospholipase-like protein 1; alpha, beta hydr | 99.76 | |
| 1lzl_A | 323 | Heroin esterase; alpha/beta hydrolase; 1.30A {Rhod | 99.75 | |
| 3fle_A | 249 | SE_1780 protein; structural genomics, APC61035.1, | 99.75 | |
| 2zsh_A | 351 | Probable gibberellin receptor GID1L1; plant hormon | 99.75 | |
| 3ain_A | 323 | 303AA long hypothetical esterase; carboxylesterase | 99.75 | |
| 3k6k_A | 322 | Esterase/lipase; alpha/beta hydrolase fold; 2.20A | 99.74 | |
| 1ei9_A | 279 | Palmitoyl protein thioesterase 1; alpha/beta hydro | 99.74 | |
| 2cb9_A | 244 | Fengycin synthetase; thioesterase, non-ribosomal p | 99.73 | |
| 1jkm_A | 361 | Brefeldin A esterase; serine hydrolase, degradatio | 99.73 | |
| 1jmk_C | 230 | SRFTE, surfactin synthetase; thioesterase, non-rib | 99.73 | |
| 2hm7_A | 310 | Carboxylesterase; alpha/beta hydrolase fold, hydro | 99.73 | |
| 1xfd_A | 723 | DIP, dipeptidyl aminopeptidase-like protein 6, dip | 99.72 | |
| 3ds8_A | 254 | LIN2722 protein; unkonwn function, structural geno | 99.72 | |
| 3tjm_A | 283 | Fatty acid synthase; thioesterase domain, fatty ac | 99.71 | |
| 1tca_A | 317 | Lipase; hydrolase(carboxylic esterase); HET: NAG; | 99.71 | |
| 1z68_A | 719 | Fibroblast activation protein, alpha subunit; sepr | 99.71 | |
| 4h0c_A | 210 | Phospholipase/carboxylesterase; PSI-biology, midwe | 99.71 | |
| 4ao6_A | 259 | Esterase; hydrolase, thermo label; 1.60A {Unidenti | 99.71 | |
| 2qru_A | 274 | Uncharacterized protein; alpha/beta-hydrolase, str | 99.7 | |
| 3e4d_A | 278 | Esterase D; S-formylglutathione hydrolase, hydrola | 99.69 | |
| 4e15_A | 303 | Kynurenine formamidase; alpha/beta hydrolase fold, | 99.69 | |
| 4a5s_A | 740 | Dipeptidyl peptidase 4 soluble form; hydrolase, ty | 99.69 | |
| 2bkl_A | 695 | Prolyl endopeptidase; mechanistic study, celiac sp | 99.67 | |
| 3i6y_A | 280 | Esterase APC40077; lipase, structural genomics, PS | 99.67 | |
| 3d0k_A | 304 | Putative poly(3-hydroxybutyrate) depolymerase LPQ; | 99.66 | |
| 1ycd_A | 243 | Hypothetical 27.3 kDa protein in AAP1-SMF2 interge | 99.66 | |
| 3fak_A | 322 | Esterase/lipase, ESTE5; HSL, hydrolase; 1.90A {Unc | 99.65 | |
| 3ls2_A | 280 | S-formylglutathione hydrolase; psychrophilic organ | 99.64 | |
| 3qh4_A | 317 | Esterase LIPW; structural genomics, ssgcid, seattl | 99.63 | |
| 3ga7_A | 326 | Acetyl esterase; phosphoserine, IDP00896, hydrolas | 99.63 | |
| 2xdw_A | 710 | Prolyl endopeptidase; alpha/beta-hydrolase, amnesi | 99.63 | |
| 1yr2_A | 741 | Prolyl oligopeptidase; prolyl endopeptidase, mecha | 99.63 | |
| 3fcx_A | 282 | FGH, esterase D, S-formylglutathione hydrolase; re | 99.62 | |
| 3h2g_A | 397 | Esterase; xanthomonas oryzae PV. oryzae, cell WALL | 99.61 | |
| 3icv_A | 316 | Lipase B, CALB; circular permutation, cleavage on | 99.58 | |
| 2uz0_A | 263 | Esterase, tributyrin esterase; alpha/beta hydrolas | 99.58 | |
| 1ys1_X | 320 | Lipase; CIS peptide Leu 234, Ca2+ ION, inhibitor h | 99.57 | |
| 2xe4_A | 751 | Oligopeptidase B; hydrolase-inhibitor complex, hyd | 99.55 | |
| 2dst_A | 131 | Hypothetical protein TTHA1544; conserved hypotheti | 99.54 | |
| 3d59_A | 383 | Platelet-activating factor acetylhydrolase; secret | 99.54 | |
| 4b6g_A | 283 | Putative esterase; hydrolase, formaldehyde detoxif | 99.54 | |
| 1lns_A | 763 | X-prolyl dipeptidyl aminopetidase; alpha beta hydr | 99.53 | |
| 3iuj_A | 693 | Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas | 99.53 | |
| 3ebl_A | 365 | Gibberellin receptor GID1; alpha/beta hydrolase, l | 99.52 | |
| 2x5x_A | 342 | PHB depolymerase PHAZ7; biopolymers, oxyanion HOLE | 99.51 | |
| 4fhz_A | 285 | Phospholipase/carboxylesterase; alpha/beta hydrola | 99.51 | |
| 1bu8_A | 452 | Protein (pancreatic lipase related protein 2); hyd | 99.5 | |
| 1w52_X | 452 | Pancreatic lipase related protein 2; detergent, cl | 99.5 | |
| 1ex9_A | 285 | Lactonizing lipase; alpha-beta hydrolase fold, pho | 99.5 | |
| 4hvt_A | 711 | Ritya.17583.B, post-proline cleaving enzyme; ssgci | 99.5 | |
| 4ezi_A | 377 | Uncharacterized protein; alpha-beta hydrolases fol | 99.5 | |
| 3doh_A | 380 | Esterase; alpha-beta hydrolase, beta sheet; 2.60A | 99.48 | |
| 1jjf_A | 268 | Xylanase Z, endo-1,4-beta-xylanase Z, 1,4-beta-D-x | 99.44 | |
| 1hpl_A | 449 | Lipase; hydrolase(carboxylic esterase); 2.30A {Equ | 99.44 | |
| 2zyr_A | 484 | Lipase, putative; fatty acid, hydrolase; HET: 1PE; | 99.44 | |
| 4f21_A | 246 | Carboxylesterase/phospholipase family protein; str | 99.43 | |
| 1rp1_A | 450 | Pancreatic lipase related protein 1; hydrolase, li | 99.41 | |
| 1gpl_A | 432 | RP2 lipase; serine esterase, hydrolase, lipid degr | 99.39 | |
| 3n2z_B | 446 | Lysosomal Pro-X carboxypeptidase; alpha/beta hydro | 99.38 | |
| 2hih_A | 431 | Lipase 46 kDa form; A1 phospholipase, phospholipid | 99.33 | |
| 1mpx_A | 615 | Alpha-amino acid ester hydrolase; alpha/beta hydro | 99.31 | |
| 1sfr_A | 304 | Antigen 85-A; alpha/beta hydrolase, structural gen | 99.23 | |
| 2dsn_A | 387 | Thermostable lipase; T1 lipase, hydrolase; 1.50A { | 99.23 | |
| 2px6_A | 316 | Thioesterase domain; thioesaterse domain, orlistat | 99.22 | |
| 3g8y_A | 391 | SUSD/RAGB-associated esterase-like protein; struct | 99.13 | |
| 2b9v_A | 652 | Alpha-amino acid ester hydrolase; catalytic triad, | 99.12 | |
| 1r88_A | 280 | MPT51/MPB51 antigen; ALFA/beta hydrolase fold, FBP | 99.08 | |
| 1dqz_A | 280 | 85C, protein (antigen 85-C); fibronectin, structur | 99.06 | |
| 3guu_A | 462 | Lipase A; protein structure, hydrolase; HET: 1PE; | 99.02 | |
| 3i2k_A | 587 | Cocaine esterase; alpha/beta hydrolase, hydrolase; | 98.97 | |
| 3nuz_A | 398 | Putative acetyl xylan esterase; structural genomic | 98.95 | |
| 3iii_A | 560 | COCE/NOND family hydrolase; structural genomics, c | 98.76 | |
| 1gkl_A | 297 | Endo-1,4-beta-xylanase Y; hydrolase, esterase fami | 98.6 | |
| 2qm0_A | 275 | BES; alpha-beta structure, structural genomics, PS | 98.23 | |
| 1cpy_A | 421 | Serine carboxypeptidase; hydrolase (carboxypeptida | 98.17 | |
| 2ogt_A | 498 | Thermostable carboxylesterase EST50; alpha/beta hy | 98.05 | |
| 1qe3_A | 489 | PNB esterase, para-nitrobenzyl esterase; alpha-bet | 98.05 | |
| 2vsq_A | 1304 | Surfactin synthetase subunit 3; ligase, peptidyl c | 97.84 | |
| 1whs_B | 153 | Serine carboxypeptidase II; HET: NAG FUC; 2.00A {T | 97.84 | |
| 3c8d_A | 403 | Enterochelin esterase; alpha-beta-alpha sandwich, | 97.72 | |
| 1ivy_A | 452 | Human protective protein; carboxypeptidase, serine | 97.66 | |
| 1whs_A | 255 | Serine carboxypeptidase II; HET: NAG FUC; 2.00A {T | 97.61 | |
| 2d81_A | 318 | PHB depolymerase; alpha/beta hydrolase fold, circu | 97.58 | |
| 1p0i_A | 529 | Cholinesterase; serine hydrolase, butyrate, hydrol | 97.49 | |
| 2ha2_A | 543 | ACHE, acetylcholinesterase; hydrolase fold, serine | 97.44 | |
| 1ea5_A | 537 | ACHE, acetylcholinesterase; hydrolase, serine hydr | 97.4 | |
| 4az3_B | 155 | Lysosomal protective protein 20 kDa chain; hydrola | 97.16 | |
| 2h7c_A | 542 | Liver carboxylesterase 1; enzyme, cholesteryl este | 97.13 | |
| 2fj0_A | 551 | JuvenIle hormone esterase; manduca sexta, alpha-be | 97.12 | |
| 1gxs_A | 270 | P-(S)-hydroxymandelonitrIle lyase chain A; inhibit | 97.07 | |
| 3gff_A | 331 | IROE-like serine hydrolase; NP_718593.1, structura | 96.95 | |
| 1gxs_B | 158 | P-(S)-hydroxymandelonitrIle lyase chain B; inhibit | 96.94 | |
| 4fol_A | 299 | FGH, S-formylglutathione hydrolase; D-type esteras | 96.93 | |
| 4ebb_A | 472 | Dipeptidyl peptidase 2; hydrolase; HET: MSE NAG; 2 | 96.88 | |
| 1ukc_A | 522 | ESTA, esterase; fungi, A/B hydrolase fold, acetylc | 96.83 | |
| 1dx4_A | 585 | ACHE, acetylcholinesterase; hydrolase, serine este | 96.74 | |
| 1ac5_A | 483 | KEX1(delta)P; carboxypeptidase, hydrolase, glycopr | 96.67 | |
| 3bix_A | 574 | Neuroligin-1, neuroligin I; esterase domain, alpha | 96.09 | |
| 4g4g_A | 433 | 4-O-methyl-glucuronoyl methylesterase; alpha/beta | 96.0 | |
| 1ac5_A | 483 | KEX1(delta)P; carboxypeptidase, hydrolase, glycopr | 95.96 | |
| 2vz8_A | 2512 | Fatty acid synthase; transferase, phosphopantethei | 95.89 | |
| 1llf_A | 534 | Lipase 3; candida cylindracea cholesterol esterase | 95.52 | |
| 1ivy_A | 452 | Human protective protein; carboxypeptidase, serine | 95.38 | |
| 2bce_A | 579 | Cholesterol esterase; hydrolase, serine esterase, | 95.1 | |
| 1thg_A | 544 | Lipase; hydrolase(carboxylic esterase); HET: NAG N | 94.9 | |
| 4az3_A | 300 | Lysosomal protective protein 32 kDa chain; hydrola | 94.57 | |
| 1tib_A | 269 | Lipase; hydrolase(carboxylic esterase); 1.84A {The | 93.86 | |
| 2gzs_A | 278 | IROE protein; enterobactin, salmochelin, DFP, hydr | 93.38 | |
| 1tia_A | 279 | Lipase; hydrolase(carboxylic esterase); 2.10A {Pen | 92.57 | |
| 1tgl_A | 269 | Triacyl-glycerol acylhydrolase; carboxylic esteras | 86.57 |
| >3om8_A Probable hydrolase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MES; 2.25A {Pseudomonas aeruginosa} SCOP: c.69.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=7.7e-38 Score=266.95 Aligned_cols=255 Identities=19% Similarity=0.277 Sum_probs=170.7
Q ss_pred cceeeEEeCcEEEEEEEcCCCCCCCceEEEEcCCCCCCccchhhHHHhhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCCH
Q 022534 11 EYGSYIKSGEYRWFVRETGSADSRLGTIVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTE 90 (295)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~g~~~~~~~~vv~lHG~~~~~~~w~~~~~~l~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~ 90 (295)
+.+.|++.+|.+++|.+.|+++ .|+|||+||+++++..|..+++.|++ +|+||++|+||||+|+++.. .|+.
T Consensus 5 ~~~~~~~~~g~~l~y~~~G~~~--~p~lvl~hG~~~~~~~w~~~~~~L~~-~~~vi~~D~rG~G~S~~~~~-----~~~~ 76 (266)
T 3om8_A 5 NLSFLATSDGASLAYRLDGAAE--KPLLALSNSIGTTLHMWDAQLPALTR-HFRVLRYDARGHGASSVPPG-----PYTL 76 (266)
T ss_dssp TCEEEECTTSCEEEEEEESCTT--SCEEEEECCTTCCGGGGGGGHHHHHT-TCEEEEECCTTSTTSCCCCS-----CCCH
T ss_pred CceEEeccCCcEEEEEecCCCC--CCEEEEeCCCccCHHHHHHHHHHhhc-CcEEEEEcCCCCCCCCCCCC-----CCCH
Confidence 4678899999999999998643 47899999999999999999999986 79999999999999997542 3688
Q ss_pred HHHHHHHHHHHHHhCCCCceEEEEecccch-HHHHHHHHhCcCccceeEEEcCCCCCCCCCchhhhhhhcccch--hhhh
Q 022534 91 NEFHEELDKLLDVLEVKYPFFLVVQGFLVG-SYGLTWALKNPSRISKLAILNSPLTASSPLPGLFQQLRIPLLG--EFTA 167 (295)
Q Consensus 91 ~~~~~~l~~~~~~l~~~~~~~lv~~G~~~G-~~~~~~a~~~p~~v~~lil~~~p~~~~~~~~~~~~~~~~~~~~--~~~~ 167 (295)
+++++|+.++++++++++ ++++ |||+| .+++.+|+++|++|+++|+++++..... .......... ... .+..
T Consensus 77 ~~~a~dl~~~l~~l~~~~-~~lv--GhS~Gg~va~~~A~~~P~rv~~lvl~~~~~~~~~-~~~~~~~~~~-~~~~~~~~~ 151 (266)
T 3om8_A 77 ARLGEDVLELLDALEVRR-AHFL--GLSLGGIVGQWLALHAPQRIERLVLANTSAWLGP-AAQWDERIAA-VLQAEDMSE 151 (266)
T ss_dssp HHHHHHHHHHHHHTTCSC-EEEE--EETHHHHHHHHHHHHCGGGEEEEEEESCCSBCCC-SHHHHHHHHH-HHHCSSSHH
T ss_pred HHHHHHHHHHHHHhCCCc-eEEE--EEChHHHHHHHHHHhChHhhheeeEecCcccCCc-hhHHHHHHHH-HHccccHHH
Confidence 999999999999999886 5666 77776 5688899999999999999976432211 1111110000 000 0000
Q ss_pred hhHHHHHHHHHhCCCccccc--cccccccccccccCCchhH-HHHHHHhcchhhhhHhhhcCcCCCCCCCcEEEEEeCCC
Q 022534 168 QNAIMAERFIEAGSPYVLKL--DKADVYRLPYLASSGPGFA-LLEAARKVNFKDISSRIGAGFSSGSWDKPVLVAWGISD 244 (295)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D 244 (295)
.......+++.. ..... ...+.++.........++. ........+..+ . ..++++|||+|+|++|
T Consensus 152 ~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~---~------l~~i~~P~Lvi~G~~D 219 (266)
T 3om8_A 152 TAAGFLGNWFPP---ALLERAEPVVERFRAMLMATNRHGLAGSFAAVRDTDLRA---Q------LARIERPTLVIAGAYD 219 (266)
T ss_dssp HHHHHHHHHSCH---HHHHSCCHHHHHHHHHHHTSCHHHHHHHHHHHHTCBCTT---T------GGGCCSCEEEEEETTC
T ss_pred HHHHHHHHhcCh---hhhhcChHHHHHHHHHHHhCCHHHHHHHHHHhhccchhh---H------hcCCCCCEEEEEeCCC
Confidence 000001111100 00000 0000000000000000000 011111111111 1 2367999999999999
Q ss_pred CCCCcchHHHHHhcCCCCeEEEEecCCCCCCCCCChHHHHHHHHHHHH
Q 022534 245 KYLPQSVAEEFQKGNPNVVKLQMIEGAGHMPQEDWPEKVVDGLRYFFL 292 (295)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~ 292 (295)
++++++.++.+++.+|+ +++++++ +||++++|+|++|++.|++||.
T Consensus 220 ~~~~~~~~~~l~~~ip~-a~~~~i~-~gH~~~~e~p~~~~~~i~~Fl~ 265 (266)
T 3om8_A 220 TVTAASHGELIAASIAG-ARLVTLP-AVHLSNVEFPQAFEGAVLSFLG 265 (266)
T ss_dssp SSSCHHHHHHHHHHSTT-CEEEEES-CCSCHHHHCHHHHHHHHHHHHT
T ss_pred CCCCHHHHHHHHHhCCC-CEEEEeC-CCCCccccCHHHHHHHHHHHhc
Confidence 99999999999999997 7999997 8999999999999999999985
|
| >3afi_E Haloalkane dehalogenase; A/B-hydrolase, hydrolase; 1.75A {Bradyrhizobium japonicum} PDB: 3a2m_A* 3a2n_A 3a2l_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.3e-36 Score=261.90 Aligned_cols=261 Identities=23% Similarity=0.309 Sum_probs=167.2
Q ss_pred eeEEeCcEEEEEEEcCCCCCCCceEEEEcCCCCCCccchhhHHHhhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCCHHHH
Q 022534 14 SYIKSGEYRWFVRETGSADSRLGTIVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEF 93 (295)
Q Consensus 14 ~~~~~~~~~~~~~~~g~~~~~~~~vv~lHG~~~~~~~w~~~~~~l~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~ 93 (295)
.+++++|.+++|.+.|++. +|+||||||+++++..|..+++.|++ +|+||++|+||||+|+++.. .|+++++
T Consensus 10 ~~~~~~g~~l~y~~~G~g~--~~pvvllHG~~~~~~~w~~~~~~L~~-~~~via~Dl~G~G~S~~~~~-----~~~~~~~ 81 (316)
T 3afi_E 10 RRAPVLGSSMAYRETGAQD--APVVLFLHGNPTSSHIWRNILPLVSP-VAHCIAPDLIGFGQSGKPDI-----AYRFFDH 81 (316)
T ss_dssp CEEEETTEEEEEEEESCTT--SCEEEEECCTTCCGGGGTTTHHHHTT-TSEEEEECCTTSTTSCCCSS-----CCCHHHH
T ss_pred eeEEeCCEEEEEEEeCCCC--CCeEEEECCCCCchHHHHHHHHHHhh-CCEEEEECCCCCCCCCCCCC-----CCCHHHH
Confidence 5678899999999998642 35899999999999999999999986 69999999999999987532 4689999
Q ss_pred HHHHHHHHHHhCCCCceEEEEecccch-HHHHHHHHhCcCccceeEEEcCCCCC--CCCCc-----------hhhhh---
Q 022534 94 HEELDKLLDVLEVKYPFFLVVQGFLVG-SYGLTWALKNPSRISKLAILNSPLTA--SSPLP-----------GLFQQ--- 156 (295)
Q Consensus 94 ~~~l~~~~~~l~~~~~~~lv~~G~~~G-~~~~~~a~~~p~~v~~lil~~~p~~~--~~~~~-----------~~~~~--- 156 (295)
++|+.++++++++++ ++|+ |||+| .+++.+|.++|++|+++|++++.... ....+ .....
T Consensus 82 a~dl~~ll~~l~~~~-~~lv--GhS~Gg~va~~~A~~~P~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (316)
T 3afi_E 82 VRYLDAFIEQRGVTS-AYLV--AQDWGTALAFHLAARRPDFVRGLAFMEFIRPMPTWQDFHHTEVAEEQDHAEAARAVFR 158 (316)
T ss_dssp HHHHHHHHHHTTCCS-EEEE--EEEHHHHHHHHHHHHCTTTEEEEEEEEECCCBSSGGGTTCCCCGGGHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCC-EEEE--EeCccHHHHHHHHHHCHHhhhheeeeccCCCcchhhhccchhhccccccchhHHHHHH
Confidence 999999999999875 6676 77776 57889999999999999999752210 00000 00000
Q ss_pred -hhcccchhhhhh-hHHHHHHHHHhCCCccccccccccccccccccCCchhHHHHHHHhcc-----------hhhhhHhh
Q 022534 157 -LRIPLLGEFTAQ-NAIMAERFIEAGSPYVLKLDKADVYRLPYLASSGPGFALLEAARKVN-----------FKDISSRI 223 (295)
Q Consensus 157 -~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~ 223 (295)
+..+........ ......++........+.......+..++.. ............... ..+....+
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 237 (316)
T 3afi_E 159 KFRTPGEGEAMILEANAFVERVLPGGIVRKLGDEEMAPYRTPFPT-PESRRPVLAFPRELPIAGEPADVYEALQSAHAAL 237 (316)
T ss_dssp HHTSTTHHHHHHTTSCHHHHTTTGGGCSSCCCHHHHHHHHTTCCS-TGGGHHHHHTGGGSCBTTBSHHHHHHHHHHHHHH
T ss_pred HhcCCchhhHHHhccchHHHHhcccccCCCCCHHHHHHHHhhcCC-ccchhHHHHHHHhccccccchhhhhHHHHHHHhh
Confidence 000000000000 0000000000000000000000000000000 000000110000000 00001111
Q ss_pred hcCcCCCCCCCcEEEEEeCCCCCCCcchHHHHHhcCCCCeEEEEecCCCCCCCCCChHHHHHHHHHHHHh
Q 022534 224 GAGFSSGSWDKPVLVAWGISDKYLPQSVAEEFQKGNPNVVKLQMIEGAGHMPQEDWPEKVVDGLRYFFLN 293 (295)
Q Consensus 224 ~~~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 293 (295)
.++++|||+|+|++|.+++++.++.+.+.+|+ ++++++++|||++++|+|++|++.|.+||..
T Consensus 238 ------~~i~~P~Lvi~G~~D~~~~~~~~~~~~~~~p~-~~~~~i~~~GH~~~~e~p~~~~~~i~~fl~~ 300 (316)
T 3afi_E 238 ------AASSYPKLLFTGEPGALVSPEFAERFAASLTR-CALIRLGAGLHYLQEDHADAIGRSVAGWIAG 300 (316)
T ss_dssp ------HHCCSCEEEEEEEECSSSCHHHHHHHHHHSSS-EEEEEEEEECSCHHHHHHHHHHHHHHHHHHH
T ss_pred ------hccCCCeEEEecCCCCccCHHHHHHHHHhCCC-CeEEEcCCCCCCchhhCHHHHHHHHHHHHhh
Confidence 14689999999999999999899999999997 7999999999999999999999999999975
|
| >1b6g_A Haloalkane dehalogenase; hydrolase, alpha/beta-hydrolase; 1.15A {Xanthobacter autotrophicus} SCOP: c.69.1.8 PDB: 1be0_A 1cij_A 2yxp_X 1edd_A 1edb_A 2dhc_A 2dhe_A 2eda_A 2edc_A 2had_A 1ede_A 2pky_X 1bez_A 1bee_A 2dhd_A* 1hde_A | Back alignment and structure |
|---|
Probab=100.00 E-value=8.6e-36 Score=260.00 Aligned_cols=262 Identities=26% Similarity=0.373 Sum_probs=169.8
Q ss_pred cccceeeEEeCc----EEEEEEEcCCCCCCCceEEEEcCCCCCCccchhhHHHhhhCCCeEEEeCCCCCCCCCCCCCCCC
Q 022534 9 GREYGSYIKSGE----YRWFVRETGSADSRLGTIVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYD 84 (295)
Q Consensus 9 ~~~~~~~~~~~~----~~~~~~~~g~~~~~~~~vv~lHG~~~~~~~w~~~~~~l~~~~~~via~Dl~G~G~S~~~~~~~~ 84 (295)
.+....+++++| .+++|.+.|++++ .|+||||||+++++..|+.+++.|++.||+||++|+||||+|+++..
T Consensus 18 ~~~~~~~~~~~g~~~g~~l~y~~~G~~~~-g~~vvllHG~~~~~~~w~~~~~~L~~~g~rvia~Dl~G~G~S~~~~~--- 93 (310)
T 1b6g_A 18 YPFSPNYLDDLPGYPGLRAHYLDEGNSDA-EDVFLCLHGEPTWSYLYRKMIPVFAESGARVIAPDFFGFGKSDKPVD--- 93 (310)
T ss_dssp CCCCCEEEESCTTCTTCEEEEEEEECTTC-SCEEEECCCTTCCGGGGTTTHHHHHHTTCEEEEECCTTSTTSCEESC---
T ss_pred CCCCceEEEecCCccceEEEEEEeCCCCC-CCEEEEECCCCCchhhHHHHHHHHHhCCCeEEEeCCCCCCCCCCCCC---
Confidence 455577899998 9999999885331 36999999999999999999999997679999999999999997642
Q ss_pred CCCCCHHHHHHHHHHHHHHhCCCCceEEEEecccch-HHHHHHHHhCcCccceeEEEcCCCCCCCC-----------Cch
Q 022534 85 DFDFTENEFHEELDKLLDVLEVKYPFFLVVQGFLVG-SYGLTWALKNPSRISKLAILNSPLTASSP-----------LPG 152 (295)
Q Consensus 85 ~~~~~~~~~~~~l~~~~~~l~~~~~~~lv~~G~~~G-~~~~~~a~~~p~~v~~lil~~~p~~~~~~-----------~~~ 152 (295)
...|+++++++|+.++++++++++ ++|+ |||+| .+|+.+|+++|++|+++|+++++...... .+.
T Consensus 94 ~~~y~~~~~a~dl~~ll~~l~~~~-~~lv--GhS~Gg~va~~~A~~~P~rv~~Lvl~~~~~~~~~~~~~~~~~~~~~~~~ 170 (310)
T 1b6g_A 94 EEDYTFEFHRNFLLALIERLDLRN-ITLV--VQDWGGFLGLTLPMADPSRFKRLIIMNAXLMTDPVTQPAFSAFVTQPAD 170 (310)
T ss_dssp GGGCCHHHHHHHHHHHHHHHTCCS-EEEE--ECTHHHHHHTTSGGGSGGGEEEEEEESCCCCCCTTTCTHHHHTTTSSTT
T ss_pred cCCcCHHHHHHHHHHHHHHcCCCC-EEEE--EcChHHHHHHHHHHhChHhheEEEEeccccccCCccccchhhhhhccch
Confidence 125789999999999999999986 6676 77776 56888999999999999999764321000 000
Q ss_pred hhhhhhc--ccchhhhhhhHHHHHHHHHhCCCccccccccccccccccccC-Cchh-HHHHHHHhcc------hhhhhHh
Q 022534 153 LFQQLRI--PLLGEFTAQNAIMAERFIEAGSPYVLKLDKADVYRLPYLASS-GPGF-ALLEAARKVN------FKDISSR 222 (295)
Q Consensus 153 ~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~------~~~~~~~ 222 (295)
.+..... .....+. .. ........ .+.......+..++.... .... .+........ ..+....
T Consensus 171 ~~~~~~~~~~~~~~~~-~~-----~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (310)
T 1b6g_A 171 GFTAWKYDLVTPSDLR-LD-----QFMKRWAP-TLTEAEASAYAAPFPDTSYQAGVRKFPKMVAQRDQAXIDISTEAISF 243 (310)
T ss_dssp THHHHHHHHHSCSSCC-HH-----HHHHHHST-TCCHHHHHHHHTTCSSGGGCHHHHHHHHHHHSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHhccCchhh-hh-----hHHhhcCC-CCCHHHHHHHhcccCCccchHHHHHHHHHhcccccchhhhhhhHhhh
Confidence 0000000 0000000 00 00000000 000000000000000000 0000 0111100000 0011111
Q ss_pred hhcCcCCC-CCCCcEEEEEeCCCCCCCcchHHHHHhcCCCCeEEEEe--cCCCCCCCCCChHHHHHHHHHHHHh
Q 022534 223 IGAGFSSG-SWDKPVLVAWGISDKYLPQSVAEEFQKGNPNVVKLQMI--EGAGHMPQEDWPEKVVDGLRYFFLN 293 (295)
Q Consensus 223 ~~~~~~~~-~~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~i--~~~gH~~~~e~p~~~~~~i~~fl~~ 293 (295)
.. +++||||+|+|++|.+++ +.++.+++.+|+ ++++++ ++|||++++ +|++|++.|.+||.+
T Consensus 244 ------l~~~i~~P~Lvi~G~~D~~~~-~~~~~~~~~ip~-~~~~~i~~~~~GH~~~~-~p~~~~~~i~~Fl~~ 308 (310)
T 1b6g_A 244 ------WQNDWNGQTFMAIGMKDKLLG-PDVMYPMKALIN-GCPEPLEIADAGHFVQE-FGEQVAREALKHFAE 308 (310)
T ss_dssp ------HHHTCCSEEEEEEETTCSSSS-HHHHHHHHHHST-TCCCCEEETTCCSCGGG-GHHHHHHHHHHHHHH
T ss_pred ------hhccccCceEEEeccCcchhh-hHHHHHHHhccc-ccceeeecCCcccchhh-ChHHHHHHHHHHHhc
Confidence 12 578999999999999998 888889998987 688877 999999999 999999999999975
|
| >1iup_A META-cleavage product hydrolase; aromatic compounds, cumene, isopropylbenzene, META-cleavage compound hydrolase; 1.60A {Pseudomonas fluorescens} SCOP: c.69.1.10 PDB: 1iun_A 1iuo_A 1uk6_A 1uk7_A 1uk8_A 1uk9_A 1uka_A 1ukb_A 2d0d_A | Back alignment and structure |
|---|
Probab=100.00 E-value=8.7e-35 Score=250.01 Aligned_cols=262 Identities=19% Similarity=0.325 Sum_probs=170.0
Q ss_pred cccceeeEEeCcEEEEEEEcCCCCCCCceEEEEcCCCCCCc---cchhhHHHhhhCCCeEEEeCCCCCCCCCCCCCCCCC
Q 022534 9 GREYGSYIKSGEYRWFVRETGSADSRLGTIVFLHGAPSHSY---SYRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDD 85 (295)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~vv~lHG~~~~~~---~w~~~~~~l~~~~~~via~Dl~G~G~S~~~~~~~~~ 85 (295)
.++.+.+++++|.+++|.+.|++ ++|||+||++.++. .|..+++.|++ +|+|+++|+||||+|+.+..
T Consensus 3 ~~~~~~~~~~~g~~l~y~~~G~g----~~vvllHG~~~~~~~~~~w~~~~~~L~~-~~~vi~~Dl~G~G~S~~~~~---- 73 (282)
T 1iup_A 3 NLEIGKSILAAGVLTNYHDVGEG----QPVILIHGSGPGVSAYANWRLTIPALSK-FYRVIAPDMVGFGFTDRPEN---- 73 (282)
T ss_dssp CTTCCEEEEETTEEEEEEEECCS----SEEEEECCCCTTCCHHHHHTTTHHHHTT-TSEEEEECCTTSTTSCCCTT----
T ss_pred CccccceEEECCEEEEEEecCCC----CeEEEECCCCCCccHHHHHHHHHHhhcc-CCEEEEECCCCCCCCCCCCC----
Confidence 46678899999999999998842 58999999976544 78899999964 89999999999999997542
Q ss_pred CCCCHHHHHHHHHHHHHHhCCCCceEEEEecccch-HHHHHHHHhCcCccceeEEEcCCCCCCCCCchhhhhhhcccchh
Q 022534 86 FDFTENEFHEELDKLLDVLEVKYPFFLVVQGFLVG-SYGLTWALKNPSRISKLAILNSPLTASSPLPGLFQQLRIPLLGE 164 (295)
Q Consensus 86 ~~~~~~~~~~~l~~~~~~l~~~~~~~lv~~G~~~G-~~~~~~a~~~p~~v~~lil~~~p~~~~~~~~~~~~~~~~~~~~~ 164 (295)
..|+.+++++|+.++++++++++ ++|+ |||+| .+++.+|.++|++|+++|+++++.......+.. .... .....
T Consensus 74 ~~~~~~~~a~dl~~~l~~l~~~~-~~lv--GhS~GG~ia~~~A~~~P~~v~~lvl~~~~~~~~~~~~~~-~~~~-~~~~~ 148 (282)
T 1iup_A 74 YNYSKDSWVDHIIGIMDALEIEK-AHIV--GNAFGGGLAIATALRYSERVDRMVLMGAAGTRFDVTEGL-NAVW-GYTPS 148 (282)
T ss_dssp CCCCHHHHHHHHHHHHHHTTCCS-EEEE--EETHHHHHHHHHHHHSGGGEEEEEEESCCCSCCCCCHHH-HHHH-TCCSC
T ss_pred CCCCHHHHHHHHHHHHHHhCCCc-eEEE--EECHhHHHHHHHHHHChHHHHHHHeeCCccCCCCCCHHH-HHHh-cCCCc
Confidence 24688999999999999999885 6676 67766 578899999999999999997654322111111 1100 00000
Q ss_pred hhhhhHHHHHHHHHh--CCCccccccccccccccccccCCchh-HHHHHHHhcchhhhhHhhhcC-cCCCCCCCcEEEEE
Q 022534 165 FTAQNAIMAERFIEA--GSPYVLKLDKADVYRLPYLASSGPGF-ALLEAARKVNFKDISSRIGAG-FSSGSWDKPVLVAW 240 (295)
Q Consensus 165 ~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~P~l~i~ 240 (295)
. .. ...+... ..+..... +.....+.....++. .................+... -...++++|+|+|+
T Consensus 149 ---~-~~-~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~ 220 (282)
T 1iup_A 149 ---I-EN-MRNLLDIFAYDRSLVTD---ELARLRYEASIQPGFQESFSSMFPEPRQRWIDALASSDEDIKTLPNETLIIH 220 (282)
T ss_dssp ---H-HH-HHHHHHHHCSSGGGCCH---HHHHHHHHHHTSTTHHHHHHHHSCSSTHHHHHHHCCCHHHHTTCCSCEEEEE
T ss_pred ---H-HH-HHHHHHHhhcCcccCCH---HHHHHHHhhccChHHHHHHHHHHhccccccccccccchhhhhhcCCCEEEEe
Confidence 0 00 0011110 00000000 000000000001110 000000000000000000000 01137899999999
Q ss_pred eCCCCCCCcchHHHHHhcCCCCeEEEEecCCCCCCCCCChHHHHHHHHHHHHh
Q 022534 241 GISDKYLPQSVAEEFQKGNPNVVKLQMIEGAGHMPQEDWPEKVVDGLRYFFLN 293 (295)
Q Consensus 241 G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 293 (295)
|++|.+++++.++++++.+++ +++++++++||++++|+|++|++.|.+|+.+
T Consensus 221 G~~D~~~p~~~~~~~~~~~~~-~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 272 (282)
T 1iup_A 221 GREDQVVPLSSSLRLGELIDR-AQLHVFGRCGHWTQIEQTDRFNRLVVEFFNE 272 (282)
T ss_dssp ETTCSSSCHHHHHHHHHHCTT-EEEEEESSCCSCHHHHSHHHHHHHHHHHHHT
T ss_pred cCCCCCCCHHHHHHHHHhCCC-CeEEEECCCCCCccccCHHHHHHHHHHHHhc
Confidence 999999999999999999997 7999999999999999999999999999975
|
| >2xua_A PCAD, 3-oxoadipate ENOL-lactonase; hydrolase, catechol metabolism; 1.90A {Burkholderia xenovorans} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-35 Score=251.81 Aligned_cols=256 Identities=18% Similarity=0.267 Sum_probs=168.1
Q ss_pred eeEEeCcEEEEEEEcCCCCCCCceEEEEcCCCCCCccchhhHHHhhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCCHHHH
Q 022534 14 SYIKSGEYRWFVRETGSADSRLGTIVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEF 93 (295)
Q Consensus 14 ~~~~~~~~~~~~~~~g~~~~~~~~vv~lHG~~~~~~~w~~~~~~l~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~ 93 (295)
.+++++|.+++|.+.|++++++|+|||+||+++++..|..+++.|++ +|+|+++|+||||+|+++.. .|+++++
T Consensus 5 ~~~~~~g~~l~y~~~g~~~~~~~~vvllHG~~~~~~~~~~~~~~L~~-~~~vi~~D~~G~G~S~~~~~-----~~~~~~~ 78 (266)
T 2xua_A 5 PYAAVNGTELHYRIDGERHGNAPWIVLSNSLGTDLSMWAPQVAALSK-HFRVLRYDTRGHGHSEAPKG-----PYTIEQL 78 (266)
T ss_dssp CEEECSSSEEEEEEESCSSSCCCEEEEECCTTCCGGGGGGGHHHHHT-TSEEEEECCTTSTTSCCCSS-----CCCHHHH
T ss_pred CeEEECCEEEEEEEcCCccCCCCeEEEecCccCCHHHHHHHHHHHhc-CeEEEEecCCCCCCCCCCCC-----CCCHHHH
Confidence 46788999999999986432257999999999999999999999986 69999999999999997542 3588999
Q ss_pred HHHHHHHHHHhCCCCceEEEEecccch-HHHHHHHHhCcCccceeEEEcCCCCCCCCCchhhhhhhcccchh-hhhhhHH
Q 022534 94 HEELDKLLDVLEVKYPFFLVVQGFLVG-SYGLTWALKNPSRISKLAILNSPLTASSPLPGLFQQLRIPLLGE-FTAQNAI 171 (295)
Q Consensus 94 ~~~l~~~~~~l~~~~~~~lv~~G~~~G-~~~~~~a~~~p~~v~~lil~~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 171 (295)
++|+.++++++++++ ++|+ |||+| .+++.+|.++|++|+++|+++++..... +..+.......... .......
T Consensus 79 ~~dl~~~l~~l~~~~-~~lv--GhS~Gg~va~~~A~~~p~~v~~lvl~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 153 (266)
T 2xua_A 79 TGDVLGLMDTLKIAR-ANFC--GLSMGGLTGVALAARHADRIERVALCNTAARIGS--PEVWVPRAVKARTEGMHALADA 153 (266)
T ss_dssp HHHHHHHHHHTTCCS-EEEE--EETHHHHHHHHHHHHCGGGEEEEEEESCCSSCSC--HHHHHHHHHHHHHHCHHHHHHH
T ss_pred HHHHHHHHHhcCCCc-eEEE--EECHHHHHHHHHHHhChhhhheeEEecCCCCCCc--hHHHHHHHHHHHhcChHHHHHH
Confidence 999999999999875 6676 77776 5688999999999999999976443211 11111000000000 0000000
Q ss_pred HHHHHHHhCCCccc-cccccccccccccccCCchhH-HHHHHHhcchhhhhHhhhcCcCCCCCCCcEEEEEeCCCCCCCc
Q 022534 172 MAERFIEAGSPYVL-KLDKADVYRLPYLASSGPGFA-LLEAARKVNFKDISSRIGAGFSSGSWDKPVLVAWGISDKYLPQ 249 (295)
Q Consensus 172 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~~~ 249 (295)
...++... .+.. .......+..........++. ........+..+ . ..++++|+|+|+|++|.++++
T Consensus 154 ~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~------l~~i~~P~lvi~G~~D~~~~~ 222 (266)
T 2xua_A 154 VLPRWFTA--DYMEREPVVLAMIRDVFVHTDKEGYASNCEAIDAADLRP---E------APGIKVPALVISGTHDLAATP 222 (266)
T ss_dssp HHHHHSCH--HHHHHCHHHHHHHHHHHHTSCHHHHHHHHHHHHHCCCGG---G------GGGCCSCEEEEEETTCSSSCH
T ss_pred HHHHHcCc--ccccCCHHHHHHHHHHHhhCCHHHHHHHHHHHhccCchh---h------hccCCCCEEEEEcCCCCcCCH
Confidence 00111000 0000 000000000000000000110 011111111111 1 126789999999999999999
Q ss_pred chHHHHHhcCCCCeEEEEecCCCCCCCCCChHHHHHHHHHHHHh
Q 022534 250 SVAEEFQKGNPNVVKLQMIEGAGHMPQEDWPEKVVDGLRYFFLN 293 (295)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 293 (295)
+.++.+++.+++ +++++++ +||++++|+|++|++.|.+||.+
T Consensus 223 ~~~~~~~~~~~~-~~~~~~~-~gH~~~~e~p~~~~~~i~~fl~~ 264 (266)
T 2xua_A 223 AQGRELAQAIAG-ARYVELD-ASHISNIERADAFTKTVVDFLTE 264 (266)
T ss_dssp HHHHHHHHHSTT-CEEEEES-CCSSHHHHTHHHHHHHHHHHHTC
T ss_pred HHHHHHHHhCCC-CEEEEec-CCCCchhcCHHHHHHHHHHHHHh
Confidence 989999999987 6999999 99999999999999999999975
|
| >3ia2_A Arylesterase; alpha-beta hydrolase fold, transition state analog, hydrolas oxidoreductase, peroxidase; 1.65A {Pseudomonas fluorescens} SCOP: c.69.1.12 PDB: 1va4_A 3t52_A* 3t4u_A* 3hi4_A 3hea_A | Back alignment and structure |
|---|
Probab=100.00 E-value=4.7e-35 Score=249.16 Aligned_cols=256 Identities=18% Similarity=0.278 Sum_probs=160.9
Q ss_pred eeEEeCcEEEEEEEcCCCCCCCceEEEEcCCCCCCccchhhHHHhhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCCHHHH
Q 022534 14 SYIKSGEYRWFVRETGSADSRLGTIVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEF 93 (295)
Q Consensus 14 ~~~~~~~~~~~~~~~g~~~~~~~~vv~lHG~~~~~~~w~~~~~~l~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~ 93 (295)
.+++.+|.+++|.+.|.+ +||||+||+++++..|..+++.|++.||+|+++|+||||+|+.+.. .++.+++
T Consensus 2 ~~~~~~g~~l~y~~~G~g----~~vvllHG~~~~~~~w~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~-----~~~~~~~ 72 (271)
T 3ia2_A 2 TFVAKDGTQIYFKDWGSG----KPVLFSHGWLLDADMWEYQMEYLSSRGYRTIAFDRRGFGRSDQPWT-----GNDYDTF 72 (271)
T ss_dssp EEECTTSCEEEEEEESSS----SEEEEECCTTCCGGGGHHHHHHHHTTTCEEEEECCTTSTTSCCCSS-----CCSHHHH
T ss_pred eEEcCCCCEEEEEccCCC----CeEEEECCCCCcHHHHHHHHHHHHhCCceEEEecCCCCccCCCCCC-----CCCHHHH
Confidence 567789999999999853 4899999999999999999999987799999999999999997543 3477899
Q ss_pred HHHHHHHHHHhCCCCceEEEEecccchH-HHHHHHHh-CcCccceeEEEcCCCCCCC---CCchhhh-hhhcccchhhhh
Q 022534 94 HEELDKLLDVLEVKYPFFLVVQGFLVGS-YGLTWALK-NPSRISKLAILNSPLTASS---PLPGLFQ-QLRIPLLGEFTA 167 (295)
Q Consensus 94 ~~~l~~~~~~l~~~~~~~lv~~G~~~G~-~~~~~a~~-~p~~v~~lil~~~p~~~~~---~~~~~~~-~~~~~~~~~~~~ 167 (295)
++|+.+++++++.++ ++++ |||+|+ +++.+++. +|++|++++++++...... ..+.... .....+......
T Consensus 73 a~d~~~~l~~l~~~~-~~lv--GhS~GG~~~~~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (271)
T 3ia2_A 73 ADDIAQLIEHLDLKE-VTLV--GFSMGGGDVARYIARHGSARVAGLVLLGAVTPLFGQKPDYPQGVPLDVFARFKTELLK 149 (271)
T ss_dssp HHHHHHHHHHHTCCS-EEEE--EETTHHHHHHHHHHHHCSTTEEEEEEESCCCSBCBCBTTBTTSBCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCC-ceEE--EEcccHHHHHHHHHHhCCcccceEEEEccCCccccCCCCCcccccHHHHHHHHHHHHh
Confidence 999999999999875 6666 778876 46665554 5999999999865321110 0000000 000000000000
Q ss_pred hhHHHHH----HHHHhCCCcccccccc-ccccccccccCCch--hHHHHHHHhcchhhhhHhhhcCcCCCCCCCcEEEEE
Q 022534 168 QNAIMAE----RFIEAGSPYVLKLDKA-DVYRLPYLASSGPG--FALLEAARKVNFKDISSRIGAGFSSGSWDKPVLVAW 240 (295)
Q Consensus 168 ~~~~~~~----~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~ 240 (295)
....... .+.............. ........ .... ..........+ ....+ .++++|+|+|+
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~---~~~~l------~~i~~P~Lvi~ 218 (271)
T 3ia2_A 150 DRAQFISDFNAPFYGINKGQVVSQGVQTQTLQIALL--ASLKATVDCVTAFAETD---FRPDM------AKIDVPTLVIH 218 (271)
T ss_dssp HHHHHHHHHHHHHHTGGGTCCCCHHHHHHHHHHHHH--SCHHHHHHHHHHHHHCB---CHHHH------TTCCSCEEEEE
T ss_pred hHHHHHHHhhHhhhccccccccCHHHHHHHHhhhhh--ccHHHHHHHHHHhhccC---Ccccc------cCCCCCEEEEE
Confidence 0000000 1110000000000000 00000000 0000 00000011111 11111 36899999999
Q ss_pred eCCCCCCCcch-HHHHHhcCCCCeEEEEecCCCCCCCCCChHHHHHHHHHHHHh
Q 022534 241 GISDKYLPQSV-AEEFQKGNPNVVKLQMIEGAGHMPQEDWPEKVVDGLRYFFLN 293 (295)
Q Consensus 241 G~~D~~~~~~~-~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 293 (295)
|++|.+++++. .+.+.+.+++ +++++++++||++++|+|++|++.|.+||.+
T Consensus 219 G~~D~~~p~~~~~~~~~~~~~~-~~~~~~~~~gH~~~~e~p~~~~~~i~~Fl~~ 271 (271)
T 3ia2_A 219 GDGDQIVPFETTGKVAAELIKG-AELKVYKDAPHGFAVTHAQQLNEDLLAFLKR 271 (271)
T ss_dssp ETTCSSSCGGGTHHHHHHHSTT-CEEEEETTCCTTHHHHTHHHHHHHHHHHHTC
T ss_pred eCCCCcCChHHHHHHHHHhCCC-ceEEEEcCCCCcccccCHHHHHHHHHHHhhC
Confidence 99999999887 4555667776 7999999999999999999999999999863
|
| >3fob_A Bromoperoxidase; structural genomics, IDP00046, bacillus ANT peroxidase, oxidoreductase; 1.74A {Bacillus anthracis str} SCOP: c.69.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-35 Score=252.21 Aligned_cols=257 Identities=19% Similarity=0.302 Sum_probs=161.0
Q ss_pred EeCcEEEEEEEcCCCCCCCceEEEEcCCCCCCccchhhHHHhhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCCHHHHHHH
Q 022534 17 KSGEYRWFVRETGSADSRLGTIVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEE 96 (295)
Q Consensus 17 ~~~~~~~~~~~~g~~~~~~~~vv~lHG~~~~~~~w~~~~~~l~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~ 96 (295)
+.+|.+++|.+.|++ +||||+||+++++..|..+++.|.++||+|+++|+||||+|+++.. .|+.+++++|
T Consensus 13 ~~~g~~l~y~~~G~g----~~vvllHG~~~~~~~w~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~-----~~~~~~~a~d 83 (281)
T 3fob_A 13 NQAPIEIYYEDHGTG----KPVVLIHGWPLSGRSWEYQVPALVEAGYRVITYDRRGFGKSSQPWE-----GYEYDTFTSD 83 (281)
T ss_dssp TTEEEEEEEEEESSS----EEEEEECCTTCCGGGGTTTHHHHHHTTEEEEEECCTTSTTSCCCSS-----CCSHHHHHHH
T ss_pred CCCceEEEEEECCCC----CeEEEECCCCCcHHHHHHHHHHHHhCCCEEEEeCCCCCCCCCCCcc-----ccCHHHHHHH
Confidence 346899999999853 5899999999999999999999987789999999999999997643 3588999999
Q ss_pred HHHHHHHhCCCCceEEEEecccchH-HHHHHHHh-CcCccceeEEEcCCCCC--C-CCCchhh-h-hhhcccchhhhhhh
Q 022534 97 LDKLLDVLEVKYPFFLVVQGFLVGS-YGLTWALK-NPSRISKLAILNSPLTA--S-SPLPGLF-Q-QLRIPLLGEFTAQN 169 (295)
Q Consensus 97 l~~~~~~l~~~~~~~lv~~G~~~G~-~~~~~a~~-~p~~v~~lil~~~p~~~--~-~~~~~~~-~-~~~~~~~~~~~~~~ 169 (295)
+.++++++++++ ++|+ |||+|+ +++.+++. +|++|++++++++.... . ...+... . .....+........
T Consensus 84 l~~ll~~l~~~~-~~lv--GhS~GG~i~~~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (281)
T 3fob_A 84 LHQLLEQLELQN-VTLV--GFSMGGGEVARYISTYGTDRIEKVVFAGAVPPYLYKSEDHPEGALDDATIETFKSGVINDR 160 (281)
T ss_dssp HHHHHHHTTCCS-EEEE--EETTHHHHHHHHHHHHCSTTEEEEEEESCCCSCCBCCSSSTTCSBCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHcCCCc-EEEE--EECccHHHHHHHHHHccccceeEEEEecCCCcchhccccccccccchhHHHHHHHHhhhhH
Confidence 999999999886 6666 778876 56666665 59999999998753211 1 0011000 0 00000000000000
Q ss_pred HHHHHHHHHhC-CCc-cccccccccccc--cccccCCchhHHHHHHHhcchhhhhHhhhcCcCCCCCCCcEEEEEeCCCC
Q 022534 170 AIMAERFIEAG-SPY-VLKLDKADVYRL--PYLASSGPGFALLEAARKVNFKDISSRIGAGFSSGSWDKPVLVAWGISDK 245 (295)
Q Consensus 170 ~~~~~~~~~~~-~~~-~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~ 245 (295)
......+.... ... ............ .......+ .............+....+ +++++|||+|+|++|.
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~d~~~~l------~~i~~P~Lii~G~~D~ 233 (281)
T 3fob_A 161 LAFLDEFTKGFFAAGDRTDLVSESFRLYNWDIAAGASP-KGTLDCITAFSKTDFRKDL------EKFNIPTLIIHGDSDA 233 (281)
T ss_dssp HHHHHHHHHHHTCBTTBCCSSCHHHHHHHHHHHHTSCH-HHHHHHHHHHHHCCCHHHH------TTCCSCEEEEEETTCS
T ss_pred HHHHHHHHHHhcccccccccchHHHHHHhhhhhcccCh-HHHHHHHHHccccchhhhh------hhcCCCEEEEecCCCC
Confidence 00011111100 000 000000000000 00000000 0011111000000111111 3789999999999999
Q ss_pred CCCcchH-HHHHhcCCCCeEEEEecCCCCCCCCCChHHHHHHHHHHHHh
Q 022534 246 YLPQSVA-EEFQKGNPNVVKLQMIEGAGHMPQEDWPEKVVDGLRYFFLN 293 (295)
Q Consensus 246 ~~~~~~~-~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 293 (295)
++|++.+ +.+++.+|+ ++++++++|||++++|+|++|+++|.+||.+
T Consensus 234 ~~p~~~~~~~~~~~~p~-~~~~~i~~~gH~~~~e~p~~~~~~i~~Fl~~ 281 (281)
T 3fob_A 234 TVPFEYSGKLTHEAIPN-SKVALIKGGPHGLNATHAKEFNEALLLFLKD 281 (281)
T ss_dssp SSCGGGTHHHHHHHSTT-CEEEEETTCCTTHHHHTHHHHHHHHHHHHCC
T ss_pred CcCHHHHHHHHHHhCCC-ceEEEeCCCCCchhhhhHHHHHHHHHHHhhC
Confidence 9998865 667788987 7999999999999999999999999999863
|
| >3v48_A Aminohydrolase, putative aminoacrylate hydrolase RUTD; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.10A {Escherichia coli SE11} | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-35 Score=253.80 Aligned_cols=250 Identities=17% Similarity=0.192 Sum_probs=160.7
Q ss_pred EEEEEcCCCCCCCceEEEEcCCCCCCccchhhHHHhhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
Q 022534 23 WFVRETGSADSRLGTIVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEELDKLLD 102 (295)
Q Consensus 23 ~~~~~~g~~~~~~~~vv~lHG~~~~~~~w~~~~~~l~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~l~~~~~ 102 (295)
++|+..|++.+..|+|||+||+++++..|..+++.|++ +|+|+++|+||||.|+.+.. ..|+++++++|+.++++
T Consensus 3 i~y~~~g~~~~~~~~vvllHG~~~~~~~w~~~~~~L~~-~~~vi~~Dl~G~G~S~~~~~----~~~~~~~~a~dl~~~l~ 77 (268)
T 3v48_A 3 MKLSLSPPPYADAPVVVLISGLGGSGSYWLPQLAVLEQ-EYQVVCYDQRGTGNNPDTLA----EDYSIAQMAAELHQALV 77 (268)
T ss_dssp SCCEECCCSSTTCCEEEEECCTTCCGGGGHHHHHHHHT-TSEEEECCCTTBTTBCCCCC----TTCCHHHHHHHHHHHHH
T ss_pred eEEEecCCCCCCCCEEEEeCCCCccHHHHHHHHHHHhh-cCeEEEECCCCCCCCCCCcc----ccCCHHHHHHHHHHHHH
Confidence 56777776544568999999999999999999999986 79999999999999987532 24689999999999999
Q ss_pred HhCCCCceEEEEecccch-HHHHHHHHhCcCccceeEEEcCCCCCCCCCchhhhhhhcccchhhhhhhHHHHHHHHHhCC
Q 022534 103 VLEVKYPFFLVVQGFLVG-SYGLTWALKNPSRISKLAILNSPLTASSPLPGLFQQLRIPLLGEFTAQNAIMAERFIEAGS 181 (295)
Q Consensus 103 ~l~~~~~~~lv~~G~~~G-~~~~~~a~~~p~~v~~lil~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (295)
++++++ ++++ |||+| .+++.+|.++|++|+++|++++...........+. .+..+...... .............
T Consensus 78 ~l~~~~-~~lv--GhS~GG~ia~~~A~~~p~~v~~lvl~~~~~~~~~~~~~~~~-~~~~~~~~~~~-~~~~~~~~~~~~~ 152 (268)
T 3v48_A 78 AAGIEH-YAVV--GHALGALVGMQLALDYPASVTVLISVNGWLRINAHTRRCFQ-VRERLLYSGGA-QAWVEAQPLFLYP 152 (268)
T ss_dssp HTTCCS-EEEE--EETHHHHHHHHHHHHCTTTEEEEEEESCCSBCCHHHHHHHH-HHHHHHHHHHH-HHHHHHHHHHHSC
T ss_pred HcCCCC-eEEE--EecHHHHHHHHHHHhChhhceEEEEeccccccchhhhHHHH-HHHHHHhccch-hhhhhhhhhhcCc
Confidence 999875 6666 77776 57888999999999999998653221100000000 00000000000 0000000000000
Q ss_pred Ccccccccccc---ccccccccCCchhHHH---HHHHhcchhhhhHhhhcCcCCCCCCCcEEEEEeCCCCCCCcchHHHH
Q 022534 182 PYVLKLDKADV---YRLPYLASSGPGFALL---EAARKVNFKDISSRIGAGFSSGSWDKPVLVAWGISDKYLPQSVAEEF 255 (295)
Q Consensus 182 ~~~~~~~~~~~---~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~ 255 (295)
........... ........... ..+. ......++.+ ...+++||||+|+|++|.+++++.++.+
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~d~~~---------~l~~i~~P~Lii~G~~D~~~p~~~~~~l 222 (268)
T 3v48_A 153 ADWMAARAPRLEAEDALALAHFQGK-NNLLRRLNALKRADFSH---------HADRIRCPVQIICASDDLLVPTACSSEL 222 (268)
T ss_dssp HHHHHTTHHHHHHHHHHHHHTCCCH-HHHHHHHHHHHHCBCTT---------TGGGCCSCEEEEEETTCSSSCTHHHHHH
T ss_pred hhhhhcccccchhhHHHHHhhcCch-hHHHHHHHHHhccchhh---------hhhcCCCCeEEEEeCCCcccCHHHHHHH
Confidence 00000000000 00000000000 0011 1111111111 1236789999999999999999999999
Q ss_pred HhcCCCCeEEEEecCCCCCCCCCChHHHHHHHHHHHHh
Q 022534 256 QKGNPNVVKLQMIEGAGHMPQEDWPEKVVDGLRYFFLN 293 (295)
Q Consensus 256 ~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 293 (295)
++.+|+ ++++++++|||++++|+|++|++.|++||.+
T Consensus 223 ~~~~p~-~~~~~~~~~GH~~~~e~p~~~~~~i~~fl~~ 259 (268)
T 3v48_A 223 HAALPD-SQKMVMPYGGHACNVTDPETFNALLLNGLAS 259 (268)
T ss_dssp HHHCSS-EEEEEESSCCTTHHHHCHHHHHHHHHHHHHH
T ss_pred HHhCCc-CeEEEeCCCCcchhhcCHHHHHHHHHHHHHH
Confidence 999997 7999999999999999999999999999976
|
| >2xt0_A Haloalkane dehalogenase; hydrolase, alpha-beta hydrolase fold; 1.90A {Plesiocystis pacifica} | Back alignment and structure |
|---|
Probab=100.00 E-value=9.3e-35 Score=251.91 Aligned_cols=257 Identities=25% Similarity=0.338 Sum_probs=166.5
Q ss_pred cccceeeEEeCc----EEEEEEEcCCCCCCCceEEEEcCCCCCCccchhhHHHhhhCCCeEEEeCCCCCCCCCCCCCCCC
Q 022534 9 GREYGSYIKSGE----YRWFVRETGSADSRLGTIVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYD 84 (295)
Q Consensus 9 ~~~~~~~~~~~~----~~~~~~~~g~~~~~~~~vv~lHG~~~~~~~w~~~~~~l~~~~~~via~Dl~G~G~S~~~~~~~~ 84 (295)
.+....+++++| .+++|.+.|+++ ..++||||||+++++..|+.+++.|++.||+||++|+||||+|+++..
T Consensus 17 ~~~~~~~~~~~g~~~g~~l~y~~~G~~~-~g~~vvllHG~~~~~~~w~~~~~~L~~~g~rvia~Dl~G~G~S~~~~~--- 92 (297)
T 2xt0_A 17 FPYAPHYLEGLPGFEGLRMHYVDEGPRD-AEHTFLCLHGEPSWSFLYRKMLPVFTAAGGRVVAPDLFGFGRSDKPTD--- 92 (297)
T ss_dssp CCCCCEEECCCTTCTTCCEEEEEESCTT-CSCEEEEECCTTCCGGGGTTTHHHHHHTTCEEEEECCTTSTTSCEESC---
T ss_pred CCCccEEEeccCCCCceEEEEEEccCCC-CCCeEEEECCCCCcceeHHHHHHHHHhCCcEEEEeCCCCCCCCCCCCC---
Confidence 455577899988 999999988533 136999999999999999999999987789999999999999997542
Q ss_pred CCCCCHHHHHHHHHHHHHHhCCCCceEEEEecccch-HHHHHHHHhCcCccceeEEEcCCCCCCCCC-chhhhhhhc--c
Q 022534 85 DFDFTENEFHEELDKLLDVLEVKYPFFLVVQGFLVG-SYGLTWALKNPSRISKLAILNSPLTASSPL-PGLFQQLRI--P 160 (295)
Q Consensus 85 ~~~~~~~~~~~~l~~~~~~l~~~~~~~lv~~G~~~G-~~~~~~a~~~p~~v~~lil~~~p~~~~~~~-~~~~~~~~~--~ 160 (295)
...|+++++++|+.++++++++++ ++|+ |||+| .+++.+|+++|++|+++|+++++. ..... +........ .
T Consensus 93 ~~~~~~~~~a~dl~~ll~~l~~~~-~~lv--GhS~Gg~va~~~A~~~P~~v~~lvl~~~~~-~~~~~~~~~~~~~~~~~~ 168 (297)
T 2xt0_A 93 DAVYTFGFHRRSLLAFLDALQLER-VTLV--CQDWGGILGLTLPVDRPQLVDRLIVMNTAL-AVGLSPGKGFESWRDFVA 168 (297)
T ss_dssp GGGCCHHHHHHHHHHHHHHHTCCS-EEEE--ECHHHHHHHTTHHHHCTTSEEEEEEESCCC-CSSSCSCHHHHHHHHHHH
T ss_pred cccCCHHHHHHHHHHHHHHhCCCC-EEEE--EECchHHHHHHHHHhChHHhcEEEEECCCC-CcccCCchhHHHHHHHhh
Confidence 125789999999999999999985 6676 77776 568889999999999999997643 11111 111100000 0
Q ss_pred cchhhhhhhHHHHHHHHHhCCCccccccccccccccccccCCchh-HHHHHHHhcc-----------hhhhhHhhhcCcC
Q 022534 161 LLGEFTAQNAIMAERFIEAGSPYVLKLDKADVYRLPYLASSGPGF-ALLEAARKVN-----------FKDISSRIGAGFS 228 (295)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~-----------~~~~~~~~~~~~~ 228 (295)
....+. ... +...... .+.......+..++ ...+. .......... ..+....+
T Consensus 169 ~~~~~~-~~~-----~~~~~~~-~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l----- 233 (297)
T 2xt0_A 169 NSPDLD-VGK-----LMQRAIP-GITDAEVAAYDAPF---PGPEFKAGVRRFPAIVPITPDMEGAEIGRQAMSFW----- 233 (297)
T ss_dssp TCTTCC-HHH-----HHHHHST-TCCHHHHHHHHTTC---SSGGGCHHHHHGGGGSCCSTTSTTHHHHHHHHHHH-----
T ss_pred cccccc-hhH-----HHhccCc-cCCHHHHHHHhccc---cCcchhHHHHHHHHhCccccccchhhHHHHHHHHh-----
Confidence 000000 000 0000000 00000000000000 00000 0000000000 00111111
Q ss_pred CC-CCCCcEEEEEeCCCCCCCcchHHHHHhcCCCCeEEEE--ecCCCCCCCCCChHHHHHHHHHHHH
Q 022534 229 SG-SWDKPVLVAWGISDKYLPQSVAEEFQKGNPNVVKLQM--IEGAGHMPQEDWPEKVVDGLRYFFL 292 (295)
Q Consensus 229 ~~-~~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~--i~~~gH~~~~e~p~~~~~~i~~fl~ 292 (295)
. ++++|+|+|+|++|.+++ +.+.++.+.+|+ +++++ +++|||++++ +|++|++.|.+||.
T Consensus 234 -~~~i~~P~Lvi~G~~D~~~~-~~~~~~~~~~p~-~~~~~~~~~~~GH~~~~-~p~~~~~~i~~fl~ 296 (297)
T 2xt0_A 234 -STQWSGPTFMAVGAQDPVLG-PEVMGMLRQAIR-GCPEPMIVEAGGHFVQE-HGEPIARAALAAFG 296 (297)
T ss_dssp -HHTCCSCEEEEEETTCSSSS-HHHHHHHHHHST-TCCCCEEETTCCSSGGG-GCHHHHHHHHHHTT
T ss_pred -hhccCCCeEEEEeCCCcccC-hHHHHHHHhCCC-CeeEEeccCCCCcCccc-CHHHHHHHHHHHHh
Confidence 2 568999999999999998 778889888887 46654 7999999999 99999999999985
|
| >2wue_A 2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoate hydrolase BPHD; HET: KEK; 1.80A {Mycobacterium tuberculosis} PDB: 2wud_A* 2wuf_A* 2wug_A* 2vf2_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-34 Score=249.53 Aligned_cols=261 Identities=20% Similarity=0.232 Sum_probs=170.0
Q ss_pred ee--eEEeCc-EEEEEEEcCCCCCCCceEEEEcCCC---CCCccchhhHHHhhhCCCeEEEeCCCCCCCCCCCCCCCCCC
Q 022534 13 GS--YIKSGE-YRWFVRETGSADSRLGTIVFLHGAP---SHSYSYRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDF 86 (295)
Q Consensus 13 ~~--~~~~~~-~~~~~~~~g~~~~~~~~vv~lHG~~---~~~~~w~~~~~~l~~~~~~via~Dl~G~G~S~~~~~~~~~~ 86 (295)
+. +++++| .+++|.+.|++. +|+|||+||++ +++..|..+++.|++ +|+|+++|+||||+|+++.. .
T Consensus 13 ~~~~~~~~~g~~~l~y~~~G~g~--~~~vvllHG~~pg~~~~~~w~~~~~~L~~-~~~via~Dl~G~G~S~~~~~----~ 85 (291)
T 2wue_A 13 SRFAEVDVDGPLKLHYHEAGVGN--DQTVVLLHGGGPGAASWTNFSRNIAVLAR-HFHVLAVDQPGYGHSDKRAE----H 85 (291)
T ss_dssp EEEEEEESSSEEEEEEEEECTTC--SSEEEEECCCCTTCCHHHHTTTTHHHHTT-TSEEEEECCTTSTTSCCCSC----C
T ss_pred ccceEEEeCCcEEEEEEecCCCC--CCcEEEECCCCCccchHHHHHHHHHHHHh-cCEEEEECCCCCCCCCCCCC----C
Confidence 66 899999 999999988642 36999999997 788899999999986 59999999999999997642 1
Q ss_pred CCCHHHHHHHHHHHHHHhCCCCceEEEEecccch-HHHHHHHHhCcCccceeEEEcCCCCCCCCCc----hhhhhhhccc
Q 022534 87 DFTENEFHEELDKLLDVLEVKYPFFLVVQGFLVG-SYGLTWALKNPSRISKLAILNSPLTASSPLP----GLFQQLRIPL 161 (295)
Q Consensus 87 ~~~~~~~~~~l~~~~~~l~~~~~~~lv~~G~~~G-~~~~~~a~~~p~~v~~lil~~~p~~~~~~~~----~~~~~~~~~~ 161 (295)
.|+++++++|+.++++++++++ ++|+ |||+| .+++.+|.++|++|+++|+++++........ ....... ..
T Consensus 86 ~~~~~~~a~dl~~~l~~l~~~~-~~lv--GhS~Gg~ia~~~A~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~-~~ 161 (291)
T 2wue_A 86 GQFNRYAAMALKGLFDQLGLGR-VPLV--GNALGGGTAVRFALDYPARAGRLVLMGPGGLSINLFAPDPTEGVKRLS-KF 161 (291)
T ss_dssp SSHHHHHHHHHHHHHHHHTCCS-EEEE--EETHHHHHHHHHHHHSTTTEEEEEEESCSSSCCCSSSCSSCHHHHHHH-HH
T ss_pred CcCHHHHHHHHHHHHHHhCCCC-eEEE--EEChhHHHHHHHHHhChHhhcEEEEECCCCCCccccccccchhhHHHH-HH
Confidence 4688999999999999999875 6676 67766 5788999999999999999976443211111 1111000 00
Q ss_pred chhhhhhhHHHHHHHHHhCC--CccccccccccccccccccCCchh--HHHHHHHhcchhh-hhHhhhcCcCCCCCCCcE
Q 022534 162 LGEFTAQNAIMAERFIEAGS--PYVLKLDKADVYRLPYLASSGPGF--ALLEAARKVNFKD-ISSRIGAGFSSGSWDKPV 236 (295)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~P~ 236 (295)
+..........+..... +.... .+.....+.....++. .+...... +.+ ........-..+++++|+
T Consensus 162 ---~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~i~~P~ 233 (291)
T 2wue_A 162 ---SVAPTRENLEAFLRVMVYDKNLIT---PELVDQRFALASTPESLTATRAMGKS--FAGADFEAGMMWREVYRLRQPV 233 (291)
T ss_dssp ---HHSCCHHHHHHHHHTSCSSGGGSC---HHHHHHHHHHHTSHHHHHHHHHHHHH--HTSTTGGGGCGGGTGGGCCSCE
T ss_pred ---hccCCHHHHHHHHHHhccCcccCC---HHHHHHHHHHhcCchHHHHHHHHHhh--ccccccccchhHHHHhhCCCCe
Confidence 00000000111111100 00000 0000000000011110 01100000 000 000000000123679999
Q ss_pred EEEEeCCCCCCCcchHHHHHhcCCCCeEEEEecCCCCCCCCCChHHHHHHHHHHHHh
Q 022534 237 LVAWGISDKYLPQSVAEEFQKGNPNVVKLQMIEGAGHMPQEDWPEKVVDGLRYFFLN 293 (295)
Q Consensus 237 l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 293 (295)
|+|+|++|.+++++.++.+++.+|+ ++++++++|||++++|+|++|++.|.+||.+
T Consensus 234 lvi~G~~D~~~~~~~~~~~~~~~p~-~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 289 (291)
T 2wue_A 234 LLIWGREDRVNPLDGALVALKTIPR-AQLHVFGQCGHWVQVEKFDEFNKLTIEFLGG 289 (291)
T ss_dssp EEEEETTCSSSCGGGGHHHHHHSTT-EEEEEESSCCSCHHHHTHHHHHHHHHHHTTC
T ss_pred EEEecCCCCCCCHHHHHHHHHHCCC-CeEEEeCCCCCChhhhCHHHHHHHHHHHHhc
Confidence 9999999999999999999999997 7999999999999999999999999999965
|
| >1zoi_A Esterase; alpha/beta hydrolase fold; 1.60A {Pseudomonas putida} PDB: 4dgq_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-34 Score=246.39 Aligned_cols=261 Identities=16% Similarity=0.182 Sum_probs=161.0
Q ss_pred eEEeCcEEEEEEEcCCCCCCCceEEEEcCCCCCCccchhhHHHhhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCCHHHHH
Q 022534 15 YIKSGEYRWFVRETGSADSRLGTIVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFH 94 (295)
Q Consensus 15 ~~~~~~~~~~~~~~g~~~~~~~~vv~lHG~~~~~~~w~~~~~~l~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~ 94 (295)
+...+|.+++|.+.|+++ .++|||+||+++++..|..+++.|+++||+|+++|+||||+|+.+.. .|++++++
T Consensus 4 ~~~~~g~~l~y~~~g~~~--~~~vvllHG~~~~~~~w~~~~~~L~~~g~~vi~~D~~G~G~S~~~~~-----~~~~~~~~ 76 (276)
T 1zoi_A 4 VTTKDGVQIFYKDWGPRD--APVIHFHHGWPLSADDWDAQLLFFLAHGYRVVAHDRRGHGRSSQVWD-----GHDMDHYA 76 (276)
T ss_dssp EECTTSCEEEEEEESCTT--SCEEEEECCTTCCGGGGHHHHHHHHHTTCEEEEECCTTSTTSCCCSS-----CCSHHHHH
T ss_pred EECCCCcEEEEEecCCCC--CCeEEEECCCCcchhHHHHHHHHHHhCCCEEEEecCCCCCCCCCCCC-----CCCHHHHH
Confidence 344589999999988533 36899999999999999999999988789999999999999986532 35889999
Q ss_pred HHHHHHHHHhCCCCceEEEEecccchH-HHHHHHHhC-cCccceeEEEcCCCCCC--C-CCchhhh-hhhcccchhhhhh
Q 022534 95 EELDKLLDVLEVKYPFFLVVQGFLVGS-YGLTWALKN-PSRISKLAILNSPLTAS--S-PLPGLFQ-QLRIPLLGEFTAQ 168 (295)
Q Consensus 95 ~~l~~~~~~l~~~~~~~lv~~G~~~G~-~~~~~a~~~-p~~v~~lil~~~p~~~~--~-~~~~~~~-~~~~~~~~~~~~~ 168 (295)
+|+.++++++++++ ++|+ |||+|+ +++.+|+++ |++|+++|++++..... . ..+.... .....+.......
T Consensus 77 ~d~~~~l~~l~~~~-~~lv--GhS~Gg~ia~~~a~~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (276)
T 1zoi_A 77 DDVAAVVAHLGIQG-AVHV--GHSTGGGEVVRYMARHPEDKVAKAVLIAAVPPLMVQTPGNPGGLPKSVFDGFQAQVASN 153 (276)
T ss_dssp HHHHHHHHHHTCTT-CEEE--EETHHHHHHHHHHHHCTTSCCCCEEEESCCCSCCBCCSSCTTSBCHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHhCCCc-eEEE--EECccHHHHHHHHHHhCHHheeeeEEecCCCccccccccccccccHHHHHHHHHHHHHh
Confidence 99999999999876 5566 777765 577778877 99999999997532111 0 0010000 0000000000000
Q ss_pred hHHHHHHHHH-hCCCcc-ccc-cccccccccccc-cCCchhHHHHHHHhcchhhhhHhhhcCcCCCCCCCcEEEEEeCCC
Q 022534 169 NAIMAERFIE-AGSPYV-LKL-DKADVYRLPYLA-SSGPGFALLEAARKVNFKDISSRIGAGFSSGSWDKPVLVAWGISD 244 (295)
Q Consensus 169 ~~~~~~~~~~-~~~~~~-~~~-~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D 244 (295)
.......+.. ...... ... ............ ..................+....+ +++++|+|+|+|++|
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l------~~i~~P~l~i~G~~D 227 (276)
T 1zoi_A 154 RAQFYRDVPAGPFYGYNRPGVEASEGIIGNWWRQGMIGSAKAHYDGIVAFSQTDFTEDL------KGIQQPVLVMHGDDD 227 (276)
T ss_dssp HHHHHHHHHHTTTTTTTSTTCCCCHHHHHHHHHHHHHSCHHHHHHHHHHHHSCCCHHHH------HHCCSCEEEEEETTC
T ss_pred HHHHHHHhhhccccccccccccccHHHHHHHHhhhhhhhHHHHHHHHHHhcccchhhhc------cccCCCEEEEEcCCC
Confidence 0000111111 000000 000 000000000000 000000000000000000111111 256899999999999
Q ss_pred CCCCcc-hHHHHHhcCCCCeEEEEecCCCCCCCCCChHHHHHHHHHHHH
Q 022534 245 KYLPQS-VAEEFQKGNPNVVKLQMIEGAGHMPQEDWPEKVVDGLRYFFL 292 (295)
Q Consensus 245 ~~~~~~-~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~ 292 (295)
++++++ ..+.+.+.+++ +++++++++||++++|+|++|++.|.+||.
T Consensus 228 ~~~~~~~~~~~~~~~~~~-~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~ 275 (276)
T 1zoi_A 228 QIVPYENSGVLSAKLLPN-GALKTYKGYPHGMPTTHADVINADLLAFIR 275 (276)
T ss_dssp SSSCSTTTHHHHHHHSTT-EEEEEETTCCTTHHHHTHHHHHHHHHHHHT
T ss_pred cccChHHHHHHHHhhCCC-ceEEEcCCCCCchhhhCHHHHHHHHHHHhc
Confidence 999887 45667777886 799999999999999999999999999986
|
| >3nwo_A PIP, proline iminopeptidase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, mycobac smegmatis; 1.90A {Mycobacterium smegmatis} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-34 Score=252.29 Aligned_cols=271 Identities=22% Similarity=0.281 Sum_probs=166.8
Q ss_pred ceeeEEeCcEEEEEEEcCCCCCC--CceEEEEcCCCCCCccchhhHHHhhh-CCCeEEEeCCCCCCCCCCCCCCCCCCCC
Q 022534 12 YGSYIKSGEYRWFVRETGSADSR--LGTIVFLHGAPSHSYSYRNVMSQMSD-AGFHCFAPDWLGFGFSDKPEKGYDDFDF 88 (295)
Q Consensus 12 ~~~~~~~~~~~~~~~~~g~~~~~--~~~vv~lHG~~~~~~~w~~~~~~l~~-~~~~via~Dl~G~G~S~~~~~~~~~~~~ 88 (295)
...+++++|.+++|.+.|+.+.. .+|||||||+++++..|..+++.|++ .+|+||++|+||||+|++..+.. ...|
T Consensus 29 ~~~~v~~~g~~l~y~~~G~~~~~~~g~plvllHG~~~~~~~w~~~~~~l~~~~~~~Via~D~rG~G~S~~~~~~~-~~~~ 107 (330)
T 3nwo_A 29 SSRTVPFGDHETWVQVTTPENAQPHALPLIVLHGGPGMAHNYVANIAALADETGRTVIHYDQVGCGNSTHLPDAP-ADFW 107 (330)
T ss_dssp CEEEEEETTEEEEEEEECCSSCCTTCCCEEEECCTTTCCSGGGGGGGGHHHHHTCCEEEECCTTSTTSCCCTTSC-GGGC
T ss_pred cceeEeecCcEEEEEEecCccCCCCCCcEEEECCCCCCchhHHHHHHHhccccCcEEEEECCCCCCCCCCCCCCc-cccc
Confidence 45689999999999999973222 34899999999999999999999974 48999999999999998732211 2246
Q ss_pred CHHHHHHHHHHHHHHhCCCCceEEEEecccch-HHHHHHHHhCcCccceeEEEcCCCCCCCCCchhhhhhhcccchhhhh
Q 022534 89 TENEFHEELDKLLDVLEVKYPFFLVVQGFLVG-SYGLTWALKNPSRISKLAILNSPLTASSPLPGLFQQLRIPLLGEFTA 167 (295)
Q Consensus 89 ~~~~~~~~l~~~~~~l~~~~~~~lv~~G~~~G-~~~~~~a~~~p~~v~~lil~~~p~~~~~~~~~~~~~~~~~~~~~~~~ 167 (295)
+.+.+++|+.++++++++++ ++|+ |||+| .+++.+|+++|++|+++|+++++..... +..........+....
T Consensus 108 ~~~~~a~dl~~ll~~lg~~~-~~lv--GhSmGG~va~~~A~~~P~~v~~lvl~~~~~~~~~-~~~~~~~~~~~~~~~~-- 181 (330)
T 3nwo_A 108 TPQLFVDEFHAVCTALGIER-YHVL--GQSWGGMLGAEIAVRQPSGLVSLAICNSPASMRL-WSEAAGDLRAQLPAET-- 181 (330)
T ss_dssp CHHHHHHHHHHHHHHHTCCS-EEEE--EETHHHHHHHHHHHTCCTTEEEEEEESCCSBHHH-HHHHHHHHHHHSCHHH--
T ss_pred cHHHHHHHHHHHHHHcCCCc-eEEE--ecCHHHHHHHHHHHhCCccceEEEEecCCcchHH-HHHHHHHHHHhcCHHH--
Confidence 88999999999999999886 6666 77776 5788999999999999999976542110 0000000000000000
Q ss_pred hhHHHHHHHHHhCCCcc--cccccccccccccc-ccCCch-h-HHHHHHHhc-----------chh--hhhHhhhcCcCC
Q 022534 168 QNAIMAERFIEAGSPYV--LKLDKADVYRLPYL-ASSGPG-F-ALLEAARKV-----------NFK--DISSRIGAGFSS 229 (295)
Q Consensus 168 ~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~-~~~~~~-~-~~~~~~~~~-----------~~~--~~~~~~~~~~~~ 229 (295)
...+ .+......... ........++.... ....+. . ......... .+. .........-..
T Consensus 182 -~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 259 (330)
T 3nwo_A 182 -RAAL-DRHEAAGTITHPDYLQAAAEFYRRHVCRVVPTPQDFADSVAQMEAEPTVYHTMNGPNEFHVVGTLGDWSVIDRL 259 (330)
T ss_dssp -HHHH-HHHHHHTCTTSHHHHHHHHHHHHHHTCCSSSCCHHHHHHHHHHHHSCHHHHHHTCSCSSSCCSGGGGCBCGGGG
T ss_pred -HHHH-HHHHhccCCCCHHHHHHHHHHHHHhhccccCCCHHHHHHHHhhccchhhhhcccCchhhhhhccccCCchhhhc
Confidence 0000 00000000000 00000000000000 000000 0 000000000 000 000000000011
Q ss_pred CCCCCcEEEEEeCCCCCCCcchHHHHHhcCCCCeEEEEecCCCCCCCCCChHHHHHHHHHHHHh
Q 022534 230 GSWDKPVLVAWGISDKYLPQSVAEEFQKGNPNVVKLQMIEGAGHMPQEDWPEKVVDGLRYFFLN 293 (295)
Q Consensus 230 ~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 293 (295)
.++++|||+|+|++|.+++ ....++.+.+|+ ++++++|+|||++++|+|++|++.|.+||.+
T Consensus 260 ~~i~~P~Lvi~G~~D~~~p-~~~~~~~~~ip~-~~~~~i~~~gH~~~~e~p~~~~~~i~~FL~~ 321 (330)
T 3nwo_A 260 PDVTAPVLVIAGEHDEATP-KTWQPFVDHIPD-VRSHVFPGTSHCTHLEKPEEFRAVVAQFLHQ 321 (330)
T ss_dssp GGCCSCEEEEEETTCSSCH-HHHHHHHHHCSS-EEEEEETTCCTTHHHHSHHHHHHHHHHHHHH
T ss_pred ccCCCCeEEEeeCCCccCh-HHHHHHHHhCCC-CcEEEeCCCCCchhhcCHHHHHHHHHHHHHh
Confidence 3678999999999999875 467888888997 7999999999999999999999999999975
|
| >2yys_A Proline iminopeptidase-related protein; TTHA1809, structural genomics, unknown function; 2.20A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-34 Score=248.40 Aligned_cols=256 Identities=20% Similarity=0.195 Sum_probs=165.9
Q ss_pred ceeeEEeCcEEEEEEEcCCCCCCCceEEEEcCCCCCCc-cchhhHHHhhhCCCeEEEeCCCCCCCCCC-CCCCCCCCCCC
Q 022534 12 YGSYIKSGEYRWFVRETGSADSRLGTIVFLHGAPSHSY-SYRNVMSQMSDAGFHCFAPDWLGFGFSDK-PEKGYDDFDFT 89 (295)
Q Consensus 12 ~~~~~~~~~~~~~~~~~g~~~~~~~~vv~lHG~~~~~~-~w~~~~~~l~~~~~~via~Dl~G~G~S~~-~~~~~~~~~~~ 89 (295)
...+++.+|.+++|.+.|+++ .|+|||+||+++++. .|..+++.|++ +|+|+++|+||||+|++ +.. ...|+
T Consensus 4 ~~~~~~~~g~~l~~~~~G~~~--~~~vvllHG~~~~~~~~w~~~~~~L~~-~~~vi~~Dl~G~G~S~~~~~~---~~~~~ 77 (286)
T 2yys_A 4 EIGYVPVGEAELYVEDVGPVE--GPALFVLHGGPGGNAYVLREGLQDYLE-GFRVVYFDQRGSGRSLELPQD---PRLFT 77 (286)
T ss_dssp EEEEEECSSCEEEEEEESCTT--SCEEEEECCTTTCCSHHHHHHHGGGCT-TSEEEEECCTTSTTSCCCCSC---GGGCC
T ss_pred ceeEEeECCEEEEEEeecCCC--CCEEEEECCCCCcchhHHHHHHHHhcC-CCEEEEECCCCCCCCCCCccC---cccCc
Confidence 346888999999999998632 469999999999999 89999999964 89999999999999997 432 11468
Q ss_pred HHHHHHHHHHHHHHhCCCCceEEEEecccch-HHHHHHHHhCcCccceeEEEcCCCCCCCCCchhhhhhh-----cc---
Q 022534 90 ENEFHEELDKLLDVLEVKYPFFLVVQGFLVG-SYGLTWALKNPSRISKLAILNSPLTASSPLPGLFQQLR-----IP--- 160 (295)
Q Consensus 90 ~~~~~~~l~~~~~~l~~~~~~~lv~~G~~~G-~~~~~~a~~~p~~v~~lil~~~p~~~~~~~~~~~~~~~-----~~--- 160 (295)
++++++|+.++++++++++ ++|+ |||+| .+++.+|.++|+ |+++|+++++.. .+....... .+
T Consensus 78 ~~~~a~dl~~ll~~l~~~~-~~lv--GhS~Gg~ia~~~a~~~p~-v~~lvl~~~~~~----~~~~~~~~~~~~~~~~~~~ 149 (286)
T 2yys_A 78 VDALVEDTLLLAEALGVER-FGLL--AHGFGAVVALEVLRRFPQ-AEGAILLAPWVN----FPWLAARLAEAAGLAPLPD 149 (286)
T ss_dssp HHHHHHHHHHHHHHTTCCS-EEEE--EETTHHHHHHHHHHHCTT-EEEEEEESCCCB----HHHHHHHHHHHTTCCCCSC
T ss_pred HHHHHHHHHHHHHHhCCCc-EEEE--EeCHHHHHHHHHHHhCcc-hheEEEeCCccC----cHHHHHHHHHHhccccchh
Confidence 9999999999999999875 6676 77776 568899999999 999999975431 111000000 00
Q ss_pred ---cchhhh-hhh-HHHHHHHHHhCCCccccccccccccccccccCCchhHHHHHHHhcchhhhhHhhhcCcCCCCCCCc
Q 022534 161 ---LLGEFT-AQN-AIMAERFIEAGSPYVLKLDKADVYRLPYLASSGPGFALLEAARKVNFKDISSRIGAGFSSGSWDKP 235 (295)
Q Consensus 161 ---~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P 235 (295)
.+.... ... ......+. ...+... .........+.....+.....-... ..... .... ...++++|
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~--~~~~--~l~~i~~P 220 (286)
T 2yys_A 150 PEENLKEALKREEPKALFDRLM-FPTPRGR--MAYEWLAEGAGILGSDAPGLAFLRN--GLWRL--DYTP--YLTPERRP 220 (286)
T ss_dssp HHHHHHHHHHHSCHHHHHHHHH-CSSHHHH--HHHHHHHHHTTCCCCSHHHHHHHHT--TGGGC--BCGG--GCCCCSSC
T ss_pred HHHHHHHHhccCChHHHHHhhh-ccCCccc--cChHHHHHHHhhccccccchhhccc--ccccC--Chhh--hhhhcCCC
Confidence 000000 000 00001110 0000000 0000000000000011100000000 00000 0001 12478999
Q ss_pred EEEEEeCCCCCCCcchHHHHHhcCCCCeEEEEecCCCCCCCCCChHHHHHHHHHHHHh
Q 022534 236 VLVAWGISDKYLPQSVAEEFQKGNPNVVKLQMIEGAGHMPQEDWPEKVVDGLRYFFLN 293 (295)
Q Consensus 236 ~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 293 (295)
+|+|+|++|.+++++ ++.+++ +++ ++++++++|||++++|+|++|++.|.+|+.+
T Consensus 221 ~lvi~G~~D~~~~~~-~~~~~~-~~~-~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 275 (286)
T 2yys_A 221 LYVLVGERDGTSYPY-AEEVAS-RLR-APIRVLPEAGHYLWIDAPEAFEEAFKEALAA 275 (286)
T ss_dssp EEEEEETTCTTTTTT-HHHHHH-HHT-CCEEEETTCCSSHHHHCHHHHHHHHHHHHHT
T ss_pred EEEEEeCCCCcCCHh-HHHHHh-CCC-CCEEEeCCCCCCcChhhHHHHHHHHHHHHHh
Confidence 999999999999999 999999 887 7999999999999999999999999999976
|
| >2psd_A Renilla-luciferin 2-monooxygenase; alpha/beta-hydrolase, luciferase, oxidoreductase; 1.40A {Renilla reniformis} PDB: 2pse_A 2psj_A* 2psh_A 2psf_A | Back alignment and structure |
|---|
Probab=100.00 E-value=8.8e-34 Score=248.06 Aligned_cols=263 Identities=17% Similarity=0.255 Sum_probs=164.9
Q ss_pred ceeeEEeCcEEEEEEEcCCCCCCCceEEEEcCCCCCCccchhhHHHhhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCCHH
Q 022534 12 YGSYIKSGEYRWFVRETGSADSRLGTIVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTEN 91 (295)
Q Consensus 12 ~~~~~~~~~~~~~~~~~g~~~~~~~~vv~lHG~~~~~~~w~~~~~~l~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~ 91 (295)
...+++++|.+++|.+.|++. +|+|||+||+++++..|..+++.|++ +|+|+++|+||||+|+++.. ..|+++
T Consensus 22 ~~~~~~~~g~~l~y~~~G~g~--~~~vvllHG~~~~~~~w~~~~~~L~~-~~~via~Dl~GhG~S~~~~~----~~~~~~ 94 (318)
T 2psd_A 22 RCKQMNVLDSFINYYDSEKHA--ENAVIFLHGNATSSYLWRHVVPHIEP-VARCIIPDLIGMGKSGKSGN----GSYRLL 94 (318)
T ss_dssp HCEEEEETTEEEEEEECCSCT--TSEEEEECCTTCCGGGGTTTGGGTTT-TSEEEEECCTTSTTCCCCTT----SCCSHH
T ss_pred cceEEeeCCeEEEEEEcCCCC--CCeEEEECCCCCcHHHHHHHHHHhhh-cCeEEEEeCCCCCCCCCCCC----CccCHH
Confidence 346899999999999988643 46999999999999999999999986 68999999999999997632 246889
Q ss_pred HHHHHHHHHHHHhCCCCceEEEEecccch-HHHHHHHHhCcCccceeEEEcCCCCCC---CCCch---hhhhhhcccchh
Q 022534 92 EFHEELDKLLDVLEVKYPFFLVVQGFLVG-SYGLTWALKNPSRISKLAILNSPLTAS---SPLPG---LFQQLRIPLLGE 164 (295)
Q Consensus 92 ~~~~~l~~~~~~l~~~~~~~lv~~G~~~G-~~~~~~a~~~p~~v~~lil~~~p~~~~---~~~~~---~~~~~~~~~~~~ 164 (295)
++++++.+++++++++++++|+ |||+| .+++.+|.++|++|+++|++++..... ...+. .+..+..+....
T Consensus 95 ~~a~dl~~ll~~l~~~~~~~lv--GhSmGg~ia~~~A~~~P~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (318)
T 2psd_A 95 DHYKYLTAWFELLNLPKKIIFV--GHDWGAALAFHYAYEHQDRIKAIVHMESVVDVIESWDEWPDIEEDIALIKSEEGEK 172 (318)
T ss_dssp HHHHHHHHHHTTSCCCSSEEEE--EEEHHHHHHHHHHHHCTTSEEEEEEEEECCSCBSCCTTSCSCHHHHHHHHSTHHHH
T ss_pred HHHHHHHHHHHhcCCCCCeEEE--EEChhHHHHHHHHHhChHhhheEEEeccccCCccchhhhhhHHHHHHHHhcccchh
Confidence 9999999999999983357777 67776 578899999999999999986422111 11111 010000000000
Q ss_pred hhhhhHHHHHHHHHhCCCccccccccccccccccccCCchhHHHHHHHhcch------------hhhhHhhhcCcCCCCC
Q 022534 165 FTAQNAIMAERFIEAGSPYVLKLDKADVYRLPYLASSGPGFALLEAARKVNF------------KDISSRIGAGFSSGSW 232 (295)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~ 232 (295)
...........+........+.......+..++................... .+....+ .++
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l------~~i 246 (318)
T 2psd_A 173 MVLENNFFVETVLPSKIMRKLEPEEFAAYLEPFKEKGEVRRPTLSWPREIPLVKGGKPDVVQIVRNYNAYL------RAS 246 (318)
T ss_dssp HHTTTCHHHHTHHHHTCSSCCCHHHHHHHHGGGCSSSGGGHHHHHHHHTCCBTTTSCHHHHHHHHHHHHHH------HTC
T ss_pred hhhcchHHHHhhccccccccCCHHHHHHHHHhhcCccccccchhcccccccccccccchhHHHHHHHHHHh------ccc
Confidence 0000000001111110000000000000000000000000001001000000 0111111 156
Q ss_pred -CCcEEEEEeCCCCCCCcchHHHHHhcCCCCeEEEEecCCCCCCCCCChHHHHHHHHHHHHh
Q 022534 233 -DKPVLVAWGISDKYLPQSVAEEFQKGNPNVVKLQMIEGAGHMPQEDWPEKVVDGLRYFFLN 293 (295)
Q Consensus 233 -~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 293 (295)
++|+|+|+|++| ++++ .++.+.+.+++ ++++++ ++||++++|+|++|++.|.+||.+
T Consensus 247 ~~~P~Lvi~G~~D-~~~~-~~~~~~~~~~~-~~~~~i-~~gH~~~~e~p~~~~~~i~~fl~~ 304 (318)
T 2psd_A 247 DDLPKLFIESDPG-FFSN-AIVEGAKKFPN-TEFVKV-KGLHFLQEDAPDEMGKYIKSFVER 304 (318)
T ss_dssp TTSCEEEEEEEEC-SSHH-HHHHHHTTSSS-EEEEEE-EESSSGGGTCHHHHHHHHHHHHHH
T ss_pred cCCCeEEEEeccc-cCcH-HHHHHHHhCCC-cEEEEe-cCCCCCHhhCHHHHHHHHHHHHHH
Confidence 899999999999 8877 78888888987 789889 789999999999999999999975
|
| >1ehy_A Protein (soluble epoxide hydrolase); alpha/beta hydrolase fold, epoxide degradation, epichlorohydrin; 2.10A {Agrobacterium tumefaciens} SCOP: c.69.1.11 | Back alignment and structure |
|---|
Probab=100.00 E-value=4.2e-34 Score=247.08 Aligned_cols=265 Identities=20% Similarity=0.293 Sum_probs=165.2
Q ss_pred ceeeEEeCcEEEEEEEcCCCCCCCceEEEEcCCCCCCccchhhHHHhhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCCHH
Q 022534 12 YGSYIKSGEYRWFVRETGSADSRLGTIVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTEN 91 (295)
Q Consensus 12 ~~~~~~~~~~~~~~~~~g~~~~~~~~vv~lHG~~~~~~~w~~~~~~l~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~ 91 (295)
...+++++|.+++|.+.|+ .|+||||||+++++..|..+++.|++ .|+||++|+||||+|+++ ...+...|+++
T Consensus 10 ~~~~~~~~g~~l~y~~~G~----g~~lvllHG~~~~~~~w~~~~~~L~~-~~~via~Dl~G~G~S~~~-~~~~~~~~~~~ 83 (294)
T 1ehy_A 10 KHYEVQLPDVKIHYVREGA----GPTLLLLHGWPGFWWEWSKVIGPLAE-HYDVIVPDLRGFGDSEKP-DLNDLSKYSLD 83 (294)
T ss_dssp CEEEEECSSCEEEEEEEEC----SSEEEEECCSSCCGGGGHHHHHHHHT-TSEEEEECCTTSTTSCCC-CTTCGGGGCHH
T ss_pred ceeEEEECCEEEEEEEcCC----CCEEEEECCCCcchhhHHHHHHHHhh-cCEEEecCCCCCCCCCCC-ccccccCcCHH
Confidence 3567889999999999884 25899999999999999999999986 599999999999999976 21001136899
Q ss_pred HHHHHHHHHHHHhCCCCceEEEEecccch-HHHHHHHHhCcCccceeEEEcCCCCCCCC-Cch------hhh-hhhcccc
Q 022534 92 EFHEELDKLLDVLEVKYPFFLVVQGFLVG-SYGLTWALKNPSRISKLAILNSPLTASSP-LPG------LFQ-QLRIPLL 162 (295)
Q Consensus 92 ~~~~~l~~~~~~l~~~~~~~lv~~G~~~G-~~~~~~a~~~p~~v~~lil~~~p~~~~~~-~~~------~~~-~~~~~~~ 162 (295)
++++|+.++++++++++ ++|+ |||+| .+++.+|.++|++|+++|+++++...... ... .+. ....+.+
T Consensus 84 ~~a~dl~~ll~~l~~~~-~~lv--GhS~Gg~va~~~A~~~P~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (294)
T 1ehy_A 84 KAADDQAALLDALGIEK-AYVV--GHDFAAIVLHKFIRKYSDRVIKAAIFDPIQPDFGPVYFGLGHVHESWYSQFHQLDM 160 (294)
T ss_dssp HHHHHHHHHHHHTTCCC-EEEE--EETHHHHHHHHHHHHTGGGEEEEEEECCSCTTC-----------CCHHHHHTTCHH
T ss_pred HHHHHHHHHHHHcCCCC-EEEE--EeChhHHHHHHHHHhChhheeEEEEecCCCCCcchhhccchhccCceEEEecCcch
Confidence 99999999999999886 6666 77776 57889999999999999999764321110 000 000 0000000
Q ss_pred hh-hhhhh----HHHHHHHHHhCC--CccccccccccccccccccCCch-h-HHHHHHHhcchhhhhHhhhcCcCCCCCC
Q 022534 163 GE-FTAQN----AIMAERFIEAGS--PYVLKLDKADVYRLPYLASSGPG-F-ALLEAARKVNFKDISSRIGAGFSSGSWD 233 (295)
Q Consensus 163 ~~-~~~~~----~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (295)
.. ..... ......+..... +..+.......+...+ ..++ . ......+.. ..+..... ..-...+++
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~-~~~~~~~~-~~~~l~~i~ 235 (294)
T 1ehy_A 161 AVEVVGSSREVCKKYFKHFFDHWSYRDELLTEEELEVHVDNC---MKPDNIHGGFNYYRAN-IRPDAALW-TDLDHTMSD 235 (294)
T ss_dssp HHHHHTSCHHHHHHHHHHHHHHTSSSSCCSCHHHHHHHHHHH---TSTTHHHHHHHHHHHH-SSSSCCCC-CTGGGSCBC
T ss_pred hHHHhccchhHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHh---cCCcccchHHHHHHHH-Hhhhhhhc-CCcccCcCC
Confidence 00 00000 000111111100 0000000000000000 0010 0 000000000 00000000 000012689
Q ss_pred CcEEEEEeCCCCCCCc-chHHHHHhcCCCCeEEEEecCCCCCCCCCChHHHHHHHHHHH
Q 022534 234 KPVLVAWGISDKYLPQ-SVAEEFQKGNPNVVKLQMIEGAGHMPQEDWPEKVVDGLRYFF 291 (295)
Q Consensus 234 ~P~l~i~G~~D~~~~~-~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl 291 (295)
||+|+|+|++|.+++. +..+.+++.+++ ++++++++|||++++|+|++|++.|.+||
T Consensus 236 ~P~Lvi~G~~D~~~~~~~~~~~~~~~~~~-~~~~~i~~~gH~~~~e~p~~~~~~i~~fl 293 (294)
T 1ehy_A 236 LPVTMIWGLGDTCVPYAPLIEFVPKYYSN-YTMETIEDCGHFLMVEKPEIAIDRIKTAF 293 (294)
T ss_dssp SCEEEEEECCSSCCTTHHHHHHHHHHBSS-EEEEEETTCCSCHHHHCHHHHHHHHHHHC
T ss_pred CCEEEEEeCCCCCcchHHHHHHHHHHcCC-CceEEeCCCCCChhhhCHHHHHHHHHHHh
Confidence 9999999999998873 567888888886 79999999999999999999999999997
|
| >2puj_A 2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoate hydrola; C-C bond hydrolase, hydrolase; HET: HPZ; 1.57A {Burkholderia xenovorans} PDB: 2pu7_A* 3v1m_A* 3v1l_A* 2puh_A* 3v1n_A* 3v1k_A* 2og1_A 2pu5_A 2rhw_A* 2rht_A* 2ri6_A | Back alignment and structure |
|---|
Probab=100.00 E-value=4.1e-34 Score=246.20 Aligned_cols=255 Identities=18% Similarity=0.295 Sum_probs=167.9
Q ss_pred eeeEEeC--c---EEEEEEEcCCCCCCCceEEEEcCCC---CCCccchhhH-HHhhhCCCeEEEeCCCCCCCCCCCCCCC
Q 022534 13 GSYIKSG--E---YRWFVRETGSADSRLGTIVFLHGAP---SHSYSYRNVM-SQMSDAGFHCFAPDWLGFGFSDKPEKGY 83 (295)
Q Consensus 13 ~~~~~~~--~---~~~~~~~~g~~~~~~~~vv~lHG~~---~~~~~w~~~~-~~l~~~~~~via~Dl~G~G~S~~~~~~~ 83 (295)
+.+++++ | .+++|.+.|++ ++|||+||++ +++..|..++ +.|++ +|+||++|+||||+|+++..
T Consensus 10 ~~~~~~~~~g~~~~~l~y~~~G~g----~~vvllHG~~~~~~~~~~w~~~~~~~L~~-~~~vi~~D~~G~G~S~~~~~-- 82 (286)
T 2puj_A 10 SKFVKINEKGFSDFNIHYNEAGNG----ETVIMLHGGGPGAGGWSNYYRNVGPFVDA-GYRVILKDSPGFNKSDAVVM-- 82 (286)
T ss_dssp EEEEEECSTTCSSEEEEEEEECCS----SEEEEECCCSTTCCHHHHHTTTHHHHHHT-TCEEEEECCTTSTTSCCCCC--
T ss_pred ceEEEecCCCcceEEEEEEecCCC----CcEEEECCCCCCCCcHHHHHHHHHHHHhc-cCEEEEECCCCCCCCCCCCC--
Confidence 5788998 8 99999998853 5899999997 7788999999 99986 59999999999999997642
Q ss_pred CCCCCCHHHHHHHHHHHHHHhCCCCceEEEEecccch-HHHHHHHHhCcCccceeEEEcCCCCCCCCC---c-hhhhhhh
Q 022534 84 DDFDFTENEFHEELDKLLDVLEVKYPFFLVVQGFLVG-SYGLTWALKNPSRISKLAILNSPLTASSPL---P-GLFQQLR 158 (295)
Q Consensus 84 ~~~~~~~~~~~~~l~~~~~~l~~~~~~~lv~~G~~~G-~~~~~~a~~~p~~v~~lil~~~p~~~~~~~---~-~~~~~~~ 158 (295)
..|+++++++|+.++++++++++ ++|+ |||+| .+++.+|.++|++|+++|+++++....... + .......
T Consensus 83 --~~~~~~~~a~dl~~~l~~l~~~~-~~lv--GhS~GG~va~~~A~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~ 157 (286)
T 2puj_A 83 --DEQRGLVNARAVKGLMDALDIDR-AHLV--GNAMGGATALNFALEYPDRIGKLILMGPGGLGPSMFAPMPMEGIKLLF 157 (286)
T ss_dssp --SSCHHHHHHHHHHHHHHHTTCCC-EEEE--EETHHHHHHHHHHHHCGGGEEEEEEESCSCCCCCSSSCSSCHHHHHHH
T ss_pred --cCcCHHHHHHHHHHHHHHhCCCc-eEEE--EECHHHHHHHHHHHhChHhhheEEEECccccCCCcccccchhhHHHHH
Confidence 14688999999999999999885 6676 77765 578899999999999999997644321111 1 0011000
Q ss_pred cccchhhhhhhHHHHHHHHHh--CCCcccccccccccccccc-ccCCchh--HHHHHHHhcc--hhhhhHhhhcCcCCCC
Q 022534 159 IPLLGEFTAQNAIMAERFIEA--GSPYVLKLDKADVYRLPYL-ASSGPGF--ALLEAARKVN--FKDISSRIGAGFSSGS 231 (295)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~-~~~~~~~--~~~~~~~~~~--~~~~~~~~~~~~~~~~ 231 (295)
.... .........+... ..+.... .+.....+. ....+.. .+........ ..+... ..++
T Consensus 158 -~~~~---~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~l~~ 224 (286)
T 2puj_A 158 -KLYA---EPSYETLKQMLQVFLYDQSLIT---EELLQGRWEAIQRQPEHLKNFLISAQKAPLSTWDVTA------RLGE 224 (286)
T ss_dssp -HHHH---SCCHHHHHHHHHHHCSCGGGCC---HHHHHHHHHHHHHCHHHHHHHHHHHHHSCGGGGCCGG------GGGG
T ss_pred -HHhh---CCcHHHHHHHHHHHhcCCccCC---HHHHHHHHHHhhcCHHHHHHHHHHHhhhhccccchhh------HHhh
Confidence 0000 0000001111110 0000000 000000000 0000100 0000000000 000001 1236
Q ss_pred CCCcEEEEEeCCCCCCCcchHHHHHhcCCCCeEEEEecCCCCCCCCCChHHHHHHHHHHHHh
Q 022534 232 WDKPVLVAWGISDKYLPQSVAEEFQKGNPNVVKLQMIEGAGHMPQEDWPEKVVDGLRYFFLN 293 (295)
Q Consensus 232 ~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 293 (295)
+++|+|+|+|++|++++++.++++++.+++ ++++++++|||++++|+|++|++.|.+||..
T Consensus 225 i~~P~Lii~G~~D~~~p~~~~~~~~~~~~~-~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 285 (286)
T 2puj_A 225 IKAKTFITWGRDDRFVPLDHGLKLLWNIDD-ARLHVFSKCGAWAQWEHADEFNRLVIDFLRH 285 (286)
T ss_dssp CCSCEEEEEETTCSSSCTHHHHHHHHHSSS-EEEEEESSCCSCHHHHTHHHHHHHHHHHHHH
T ss_pred cCCCEEEEEECCCCccCHHHHHHHHHHCCC-CeEEEeCCCCCCccccCHHHHHHHHHHHHhc
Confidence 789999999999999999999999999997 7999999999999999999999999999964
|
| >1a88_A Chloroperoxidase L; haloperoxidase, oxidoreductase; 1.90A {Streptomyces lividans} SCOP: c.69.1.12 | Back alignment and structure |
|---|
Probab=100.00 E-value=9.7e-34 Score=241.53 Aligned_cols=262 Identities=21% Similarity=0.244 Sum_probs=160.7
Q ss_pred eEEeCcEEEEEEEcCCCCCCCceEEEEcCCCCCCccchhhHHHhhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCCHHHHH
Q 022534 15 YIKSGEYRWFVRETGSADSRLGTIVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFH 94 (295)
Q Consensus 15 ~~~~~~~~~~~~~~g~~~~~~~~vv~lHG~~~~~~~w~~~~~~l~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~ 94 (295)
+.+.+|.+++|.+.|+++ .++|||+||+++++..|..+++.|+++||+|+++|+||||+|+.+.. .|++++++
T Consensus 3 ~~~~~g~~l~y~~~g~~~--~~~vvllHG~~~~~~~w~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~-----~~~~~~~~ 75 (275)
T 1a88_A 3 VTTSDGTNIFYKDWGPRD--GLPVVFHHGWPLSADDWDNQMLFFLSHGYRVIAHDRRGHGRSDQPST-----GHDMDTYA 75 (275)
T ss_dssp EECTTSCEEEEEEESCTT--SCEEEEECCTTCCGGGGHHHHHHHHHTTCEEEEECCTTSTTSCCCSS-----CCSHHHHH
T ss_pred EEccCCCEEEEEEcCCCC--CceEEEECCCCCchhhHHHHHHHHHHCCceEEEEcCCcCCCCCCCCC-----CCCHHHHH
Confidence 455689999999988543 36899999999999999999999988789999999999999986532 35889999
Q ss_pred HHHHHHHHHhCCCCceEEEEecccchH-HHHHHHHhC-cCccceeEEEcCCCCCC--C-CCchhh-hhhhcccchhhhhh
Q 022534 95 EELDKLLDVLEVKYPFFLVVQGFLVGS-YGLTWALKN-PSRISKLAILNSPLTAS--S-PLPGLF-QQLRIPLLGEFTAQ 168 (295)
Q Consensus 95 ~~l~~~~~~l~~~~~~~lv~~G~~~G~-~~~~~a~~~-p~~v~~lil~~~p~~~~--~-~~~~~~-~~~~~~~~~~~~~~ 168 (295)
+|+.++++++++++ ++++ |||+|+ +++.+|+++ |++|+++|++++..... . ..+... ......+.......
T Consensus 76 ~dl~~~l~~l~~~~-~~lv--GhS~Gg~ia~~~a~~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (275)
T 1a88_A 76 ADVAALTEALDLRG-AVHI--GHSTGGGEVARYVARAEPGRVAKAVLVSAVPPVMVKSDTNPDGLPLEVFDEFRAALAAN 152 (275)
T ss_dssp HHHHHHHHHHTCCS-EEEE--EETHHHHHHHHHHHHSCTTSEEEEEEESCCCSCCBCBTTBTTSBCHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHcCCCc-eEEE--EeccchHHHHHHHHHhCchheEEEEEecCCCcccccCccCcccCCHHHHHHHHHHHhhh
Confidence 99999999999875 6666 777765 566777776 99999999987532111 0 000000 00000000000000
Q ss_pred hHHHHHHHHH-hCCCcc-ccc-ccccccccccccc-CCchhHHHHHHHhcchhhhhHhhhcCcCCCCCCCcEEEEEeCCC
Q 022534 169 NAIMAERFIE-AGSPYV-LKL-DKADVYRLPYLAS-SGPGFALLEAARKVNFKDISSRIGAGFSSGSWDKPVLVAWGISD 244 (295)
Q Consensus 169 ~~~~~~~~~~-~~~~~~-~~~-~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D 244 (295)
.......+.. ...... ... ............. .................+....+ .++++|+|+|+|++|
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l------~~i~~P~lii~G~~D 226 (275)
T 1a88_A 153 RAQFYIDVPSGPFYGFNREGATVSQGLIDHWWLQGMMGAANAHYECIAAFSETDFTDDL------KRIDVPVLVAHGTDD 226 (275)
T ss_dssp HHHHHHHHHHTTTTTTTSTTCCCCHHHHHHHHHHHHHSCHHHHHHHHHHHHHCCCHHHH------HHCCSCEEEEEETTC
T ss_pred HHHHHHhhhccccccccCcccccCHHHHHHHHHHhhhcchHhHHHHHhhhhhccccccc------ccCCCCEEEEecCCC
Confidence 0000011110 000000 000 0000000000000 00000000000000000111111 256899999999999
Q ss_pred CCCCcc-hHHHHHhcCCCCeEEEEecCCCCCCCCCChHHHHHHHHHHHHh
Q 022534 245 KYLPQS-VAEEFQKGNPNVVKLQMIEGAGHMPQEDWPEKVVDGLRYFFLN 293 (295)
Q Consensus 245 ~~~~~~-~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 293 (295)
.+++++ ..+.+.+.+++ +++++++++||++++|+|++|++.|.+||.+
T Consensus 227 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~ 275 (275)
T 1a88_A 227 QVVPYADAAPKSAELLAN-ATLKSYEGLPHGMLSTHPEVLNPDLLAFVKS 275 (275)
T ss_dssp SSSCSTTTHHHHHHHSTT-EEEEEETTCCTTHHHHCHHHHHHHHHHHHHC
T ss_pred ccCCcHHHHHHHHhhCCC-cEEEEcCCCCccHHHhCHHHHHHHHHHHhhC
Confidence 999887 45666777886 7999999999999999999999999999863
|
| >1brt_A Bromoperoxidase A2; haloperoxidase, oxidoreductase, alpha/beta hydrolase fold, mutant M99T; 1.50A {Streptomyces aureofaciens} SCOP: c.69.1.12 PDB: 1bro_A 1a8u_A 1a7u_A | Back alignment and structure |
|---|
Probab=100.00 E-value=4.4e-34 Score=244.49 Aligned_cols=253 Identities=23% Similarity=0.308 Sum_probs=162.3
Q ss_pred EeCcEEEEEEEcCCCCCCCceEEEEcCCCCCCccchhhHHHhhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCCHHHHHHH
Q 022534 17 KSGEYRWFVRETGSADSRLGTIVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEE 96 (295)
Q Consensus 17 ~~~~~~~~~~~~g~~~~~~~~vv~lHG~~~~~~~w~~~~~~l~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~ 96 (295)
+.+|.+++|.+.|++ +||||+||+++++..|..+++.|+++||+|+++|+||||+|+.+.. .|+.+++++|
T Consensus 9 ~~~g~~l~y~~~g~g----~pvvllHG~~~~~~~~~~~~~~L~~~g~~vi~~D~~G~G~S~~~~~-----~~~~~~~a~d 79 (277)
T 1brt_A 9 NSTSIDLYYEDHGTG----QPVVLIHGFPLSGHSWERQSAALLDAGYRVITYDRRGFGQSSQPTT-----GYDYDTFAAD 79 (277)
T ss_dssp TTEEEEEEEEEECSS----SEEEEECCTTCCGGGGHHHHHHHHHTTCEEEEECCTTSTTSCCCSS-----CCSHHHHHHH
T ss_pred cCCCcEEEEEEcCCC----CeEEEECCCCCcHHHHHHHHHHHhhCCCEEEEeCCCCCCCCCCCCC-----CccHHHHHHH
Confidence 457899999998843 4799999999999999999999988789999999999999997542 4688999999
Q ss_pred HHHHHHHhCCCCceEEEEecccch-HHHHHHHHhCcC-ccceeEEEcCCCCCC--C-CCchh--hhhhhcccchhhhhhh
Q 022534 97 LDKLLDVLEVKYPFFLVVQGFLVG-SYGLTWALKNPS-RISKLAILNSPLTAS--S-PLPGL--FQQLRIPLLGEFTAQN 169 (295)
Q Consensus 97 l~~~~~~l~~~~~~~lv~~G~~~G-~~~~~~a~~~p~-~v~~lil~~~p~~~~--~-~~~~~--~~~~~~~~~~~~~~~~ 169 (295)
+.++++++++++ ++|+ |||+| .+++.+|.++|+ +|+++|++++..... . ..+.. .......+........
T Consensus 80 l~~~l~~l~~~~-~~lv--GhS~Gg~va~~~a~~~p~~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (277)
T 1brt_A 80 LNTVLETLDLQD-AVLV--GFSTGTGEVARYVSSYGTARIAKVAFLASLEPFLLKTDDNPDGAAPQEFFDGIVAAVKADR 156 (277)
T ss_dssp HHHHHHHHTCCS-EEEE--EEGGGHHHHHHHHHHHCSTTEEEEEEESCCCSCCBCBTTBTTCSBCHHHHHHHHHHHHHCH
T ss_pred HHHHHHHhCCCc-eEEE--EECccHHHHHHHHHHcCcceEEEEEEecCcCccccccccCccccccHHHHHHHHHHHhcCc
Confidence 999999999875 6676 77776 578889999999 999999986522110 0 00000 0000000000000000
Q ss_pred HHHHHHHHHhCCCcc--cc-ccccccccccccccCCchhHHHHHHHhcchhhh---hHhhhcCc--CCCCCCCcEEEEEe
Q 022534 170 AIMAERFIEAGSPYV--LK-LDKADVYRLPYLASSGPGFALLEAARKVNFKDI---SSRIGAGF--SSGSWDKPVLVAWG 241 (295)
Q Consensus 170 ~~~~~~~~~~~~~~~--~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~--~~~~~~~P~l~i~G 241 (295)
......+........ .. ....+... .+............ ...+.... ...++++|+|+|+|
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G 225 (277)
T 1brt_A 157 YAFYTGFFNDFYNLDENLGTRISEEAVR-----------NSWNTAASGGFFAAAAAPTTWYTDFRADIPRIDVPALILHG 225 (277)
T ss_dssp HHHHHHHHHHHTTHHHHBTTTBCHHHHH-----------HHHHHHHHSCHHHHHHGGGGTTCCCTTTGGGCCSCEEEEEE
T ss_pred hhhHHHHHHHHhhccccccccCCHHHHH-----------HHHHHHhccchHHHHHHHHHHhccchhhcccCCCCeEEEec
Confidence 000001110000000 00 00000000 00000000000000 00000000 12367899999999
Q ss_pred CCCCCCCcchH-HHHHhcCCCCeEEEEecCCCCCCCCCChHHHHHHHHHHHHh
Q 022534 242 ISDKYLPQSVA-EEFQKGNPNVVKLQMIEGAGHMPQEDWPEKVVDGLRYFFLN 293 (295)
Q Consensus 242 ~~D~~~~~~~~-~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 293 (295)
++|.+++++.+ +.+++.+++ +++++++++||++++|+|++|++.|.+|+.+
T Consensus 226 ~~D~~~~~~~~~~~~~~~~~~-~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 277 (277)
T 1brt_A 226 TGDRTLPIENTARVFHKALPS-AEYVEVEGAPHGLLWTHAEEVNTALLAFLAK 277 (277)
T ss_dssp TTCSSSCGGGTHHHHHHHCTT-SEEEEETTCCTTHHHHTHHHHHHHHHHHHHC
T ss_pred CCCccCChHHHHHHHHHHCCC-CcEEEeCCCCcchhhhCHHHHHHHHHHHHhC
Confidence 99999998887 889999987 7999999999999999999999999999863
|
| >1a8q_A Bromoperoxidase A1; haloperoxidase, oxidoreductase; 1.75A {Streptomyces aureofaciens} SCOP: c.69.1.12 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-33 Score=239.55 Aligned_cols=261 Identities=18% Similarity=0.231 Sum_probs=160.2
Q ss_pred eeEEeCcEEEEEEEcCCCCCCCceEEEEcCCCCCCccchhhHHHhhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCCHHHH
Q 022534 14 SYIKSGEYRWFVRETGSADSRLGTIVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEF 93 (295)
Q Consensus 14 ~~~~~~~~~~~~~~~g~~~~~~~~vv~lHG~~~~~~~w~~~~~~l~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~ 93 (295)
++.+.+|.+++|.+.|++ ++|||+||+++++..|..+++.|++.||+|+++|+||||+|+.+.. .|+.+++
T Consensus 2 ~~~~~~g~~l~y~~~g~g----~~vvllHG~~~~~~~w~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~-----~~~~~~~ 72 (274)
T 1a8q_A 2 ICTTRDGVEIFYKDWGQG----RPVVFIHGWPLNGDAWQDQLKAVVDAGYRGIAHDRRGHGHSTPVWD-----GYDFDTF 72 (274)
T ss_dssp EEECTTSCEEEEEEECSS----SEEEEECCTTCCGGGGHHHHHHHHHTTCEEEEECCTTSTTSCCCSS-----CCSHHHH
T ss_pred eEEccCCCEEEEEecCCC----ceEEEECCCcchHHHHHHHHHHHHhCCCeEEEEcCCCCCCCCCCCC-----CCcHHHH
Confidence 345568999999988842 5899999999999999999999988789999999999999986532 3588999
Q ss_pred HHHHHHHHHHhCCCCceEEEEecccchH-HHHHHHHhC-cCccceeEEEcCCC--CCC-CCCchhhh-hhhcccchhhhh
Q 022534 94 HEELDKLLDVLEVKYPFFLVVQGFLVGS-YGLTWALKN-PSRISKLAILNSPL--TAS-SPLPGLFQ-QLRIPLLGEFTA 167 (295)
Q Consensus 94 ~~~l~~~~~~l~~~~~~~lv~~G~~~G~-~~~~~a~~~-p~~v~~lil~~~p~--~~~-~~~~~~~~-~~~~~~~~~~~~ 167 (295)
++|+.+++++++.++ ++|+ |||+|+ +++.+|+++ |++|+++|++++.. ... ...+.... .....+......
T Consensus 73 ~~dl~~~l~~l~~~~-~~lv--GhS~Gg~ia~~~a~~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (274)
T 1a8q_A 73 ADDLNDLLTDLDLRD-VTLV--AHSMGGGELARYVGRHGTGRLRSAVLLSAIPPVMIKSDKNPDGVPDEVFDALKNGVLT 149 (274)
T ss_dssp HHHHHHHHHHTTCCS-EEEE--EETTHHHHHHHHHHHHCSTTEEEEEEESCCCSCCBCCSSCTTSBCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCc-eEEE--EeCccHHHHHHHHHHhhhHheeeeeEecCCCccccccccCcccchHHHHHHHHHHhhc
Confidence 999999999998875 6666 777765 566777765 99999999987522 111 00110000 000000000000
Q ss_pred hhHHHHHHHHHh--CCCccccccccccccccccccCCch-hHHHHHHHhcchhhhhHhhhcCcCCCCCCCcEEEEEeCCC
Q 022534 168 QNAIMAERFIEA--GSPYVLKLDKADVYRLPYLASSGPG-FALLEAARKVNFKDISSRIGAGFSSGSWDKPVLVAWGISD 244 (295)
Q Consensus 168 ~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D 244 (295)
........+... ..............+.......... .............+....+ .++++|+|+|+|++|
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l------~~i~~P~lii~G~~D 223 (274)
T 1a8q_A 150 ERSQFWKDTAEGFFSANRPGNKVTQGNKDAFWYMAMAQTIEGGVRCVDAFGYTDFTEDL------KKFDIPTLVVHGDDD 223 (274)
T ss_dssp HHHHHHHHHHHHHTTTTSTTCCCCHHHHHHHHHHHTTSCHHHHHHHHHHHHHCCCHHHH------TTCCSCEEEEEETTC
T ss_pred cHHHHHHHhcccccccccccccccHHHHHHHHHHhhhcChHHHHHHHhhhhcCcHHHHh------hcCCCCEEEEecCcC
Confidence 000000011000 0000000000000000000000000 0000000000000111111 367999999999999
Q ss_pred CCCCcc-hHHHHHhcCCCCeEEEEecCCCCCCCCC--ChHHHHHHHHHHHHh
Q 022534 245 KYLPQS-VAEEFQKGNPNVVKLQMIEGAGHMPQED--WPEKVVDGLRYFFLN 293 (295)
Q Consensus 245 ~~~~~~-~~~~~~~~~~~~~~~~~i~~~gH~~~~e--~p~~~~~~i~~fl~~ 293 (295)
.+++++ ....+.+.+++ +++++++++||++++| +|++|++.|.+||.+
T Consensus 224 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~gH~~~~e~~~p~~~~~~i~~fl~~ 274 (274)
T 1a8q_A 224 QVVPIDATGRKSAQIIPN-AELKVYEGSSHGIAMVPGDKEKFNRDLLEFLNK 274 (274)
T ss_dssp SSSCGGGTHHHHHHHSTT-CEEEEETTCCTTTTTSTTHHHHHHHHHHHHHTC
T ss_pred CCCCcHHHHHHHHhhCCC-ceEEEECCCCCceecccCCHHHHHHHHHHHhcC
Confidence 999887 45566777886 7999999999999999 999999999999863
|
| >1a8s_A Chloroperoxidase F; haloperoxidase, oxidoreductase, propionate complex; 1.80A {Pseudomonas fluorescens} SCOP: c.69.1.12 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-33 Score=239.58 Aligned_cols=259 Identities=18% Similarity=0.262 Sum_probs=159.5
Q ss_pred eEEeCcEEEEEEEcCCCCCCCceEEEEcCCCCCCccchhhHHHhhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCCHHHHH
Q 022534 15 YIKSGEYRWFVRETGSADSRLGTIVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFH 94 (295)
Q Consensus 15 ~~~~~~~~~~~~~~g~~~~~~~~vv~lHG~~~~~~~w~~~~~~l~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~ 94 (295)
+.+.+|.+++|.+.|++ ++|||+||+++++..|..+++.|+++||+|+++|+||||+|+.+.. .|+.++++
T Consensus 3 ~~~~~g~~l~y~~~g~~----~~vvllHG~~~~~~~~~~~~~~L~~~g~~vi~~D~~G~G~S~~~~~-----~~~~~~~~ 73 (273)
T 1a8s_A 3 FTTRDGTQIYYKDWGSG----QPIVFSHGWPLNADSWESQMIFLAAQGYRVIAHDRRGHGRSSQPWS-----GNDMDTYA 73 (273)
T ss_dssp EECTTSCEEEEEEESCS----SEEEEECCTTCCGGGGHHHHHHHHHTTCEEEEECCTTSTTSCCCSS-----CCSHHHHH
T ss_pred EecCCCcEEEEEEcCCC----CEEEEECCCCCcHHHHhhHHhhHhhCCcEEEEECCCCCCCCCCCCC-----CCCHHHHH
Confidence 34558899999988842 5899999999999999999999988789999999999999986532 35789999
Q ss_pred HHHHHHHHHhCCCCceEEEEecccchH-HHHHHHHhC-cCccceeEEEcCCCCC--CC-CCchhh-hhhhcccchhhhhh
Q 022534 95 EELDKLLDVLEVKYPFFLVVQGFLVGS-YGLTWALKN-PSRISKLAILNSPLTA--SS-PLPGLF-QQLRIPLLGEFTAQ 168 (295)
Q Consensus 95 ~~l~~~~~~l~~~~~~~lv~~G~~~G~-~~~~~a~~~-p~~v~~lil~~~p~~~--~~-~~~~~~-~~~~~~~~~~~~~~ 168 (295)
+|+.++++++++++ ++|+ |||+|+ +++.+|+++ |++|+++|++++.... .. ..+... ......+.......
T Consensus 74 ~dl~~~l~~l~~~~-~~lv--GhS~Gg~ia~~~a~~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (273)
T 1a8s_A 74 DDLAQLIEHLDLRD-AVLF--GFSTGGGEVARYIGRHGTARVAKAGLISAVPPLMLKTEANPGGLPMEVFDGIRQASLAD 150 (273)
T ss_dssp HHHHHHHHHTTCCS-EEEE--EETHHHHHHHHHHHHHCSTTEEEEEEESCCCSCCBCCSSCTTSBCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCC-eEEE--EeChHHHHHHHHHHhcCchheeEEEEEcccCcccccCccccccCcHHHHHHHHHHhHhh
Confidence 99999999999875 6666 777765 566767765 9999999999753211 10 001000 00000000000000
Q ss_pred hHHHHHHHHH-hCCCcc-ccc-cccccccccccc--cCCchhHHHHHHHhcchhhhhHhhhcCcCCCCCCCcEEEEEeCC
Q 022534 169 NAIMAERFIE-AGSPYV-LKL-DKADVYRLPYLA--SSGPGFALLEAARKVNFKDISSRIGAGFSSGSWDKPVLVAWGIS 243 (295)
Q Consensus 169 ~~~~~~~~~~-~~~~~~-~~~-~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~ 243 (295)
.......+.. ...... ... ............ .... .............+....+ .++++|+|+|+|++
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l------~~i~~P~lii~G~~ 223 (273)
T 1a8s_A 151 RSQLYKDLASGPFFGFNQPGAKSSAGMVDWFWLQGMAAGH-KNAYDCIKAFSETDFTEDL------KKIDVPTLVVHGDA 223 (273)
T ss_dssp HHHHHHHHHHTTSSSTTSTTCCCCHHHHHHHHHHHHHSCH-HHHHHHHHHHHHCCCHHHH------HTCCSCEEEEEETT
T ss_pred HHHHHHHhhcccccCcCCcccccCHHHHHHHHHhccccch-hHHHHHHHHHhccChhhhh------hcCCCCEEEEECCC
Confidence 0000011111 000000 000 000000000000 0000 0000000000000111111 26789999999999
Q ss_pred CCCCCcc-hHHHHHhcCCCCeEEEEecCCCCCCCCCChHHHHHHHHHHHHh
Q 022534 244 DKYLPQS-VAEEFQKGNPNVVKLQMIEGAGHMPQEDWPEKVVDGLRYFFLN 293 (295)
Q Consensus 244 D~~~~~~-~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 293 (295)
|++++++ ..+.+.+.+++ +++++++++||++++|+|++|++.|.+||.+
T Consensus 224 D~~~~~~~~~~~~~~~~~~-~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~ 273 (273)
T 1a8s_A 224 DQVVPIEASGIASAALVKG-STLKIYSGAPHGLTDTHKDQLNADLLAFIKG 273 (273)
T ss_dssp CSSSCSTTTHHHHHHHSTT-CEEEEETTCCSCHHHHTHHHHHHHHHHHHHC
T ss_pred CccCChHHHHHHHHHhCCC-cEEEEeCCCCCcchhhCHHHHHHHHHHHHhC
Confidence 9999887 45667777886 7999999999999999999999999999863
|
| >2wj6_A 1H-3-hydroxy-4-oxoquinaldine 2,4-dioxygenase; oxidoreductase, alpha/beta hydrolase; HET: ZZ8 SRT; 2.00A {Arthrobacter nitroguajacolicus} PDB: 2wj4_A* 2wj3_A* 2wm2_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.1e-34 Score=243.51 Aligned_cols=253 Identities=15% Similarity=0.204 Sum_probs=160.1
Q ss_pred eeeEEeCcEEEEEEEc--CCCCCCCceEEEEcCCCCCCccchhhHHHhhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCCH
Q 022534 13 GSYIKSGEYRWFVRET--GSADSRLGTIVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTE 90 (295)
Q Consensus 13 ~~~~~~~~~~~~~~~~--g~~~~~~~~vv~lHG~~~~~~~w~~~~~~l~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~ 90 (295)
-.+++++|.+++|.+. |.+ .|+||||||+++++..|..+++.|++ +|+||++|+||||+|+++.. .|++
T Consensus 6 ~~~~~~~g~~l~y~~~~~G~~---~p~vvllHG~~~~~~~w~~~~~~L~~-~~rvia~DlrGhG~S~~~~~-----~~~~ 76 (276)
T 2wj6_A 6 LHETLVFDNKLSYIDNQRDTD---GPAILLLPGWCHDHRVYKYLIQELDA-DFRVIVPNWRGHGLSPSEVP-----DFGY 76 (276)
T ss_dssp EEEEEETTEEEEEEECCCCCS---SCEEEEECCTTCCGGGGHHHHHHHTT-TSCEEEECCTTCSSSCCCCC-----CCCH
T ss_pred ceEEeeCCeEEEEEEecCCCC---CCeEEEECCCCCcHHHHHHHHHHHhc-CCEEEEeCCCCCCCCCCCCC-----CCCH
Confidence 3578889999999998 632 36899999999999999999999985 79999999999999997532 4689
Q ss_pred HHHHHHHHHHHHHhCCCCceEEEEecccch-HHHHHHHHhC-cCccceeEEEcCCCCCCCCCchhhhhhhc-ccchhhhh
Q 022534 91 NEFHEELDKLLDVLEVKYPFFLVVQGFLVG-SYGLTWALKN-PSRISKLAILNSPLTASSPLPGLFQQLRI-PLLGEFTA 167 (295)
Q Consensus 91 ~~~~~~l~~~~~~l~~~~~~~lv~~G~~~G-~~~~~~a~~~-p~~v~~lil~~~p~~~~~~~~~~~~~~~~-~~~~~~~~ 167 (295)
+++++|+.++++++++++ ++|+ |||+| .+++.+|.++ |++|+++|++++..... .+........ ........
T Consensus 77 ~~~a~dl~~ll~~l~~~~-~~lv--GhSmGG~va~~~A~~~~P~rv~~lvl~~~~~~~~--~~~~~~~~~~~~~~~~~~~ 151 (276)
T 2wj6_A 77 QEQVKDALEILDQLGVET-FLPV--SHSHGGWVLVELLEQAGPERAPRGIIMDWLMWAP--KPDFAKSLTLLKDPERWRE 151 (276)
T ss_dssp HHHHHHHHHHHHHHTCCS-EEEE--EEGGGHHHHHHHHHHHHHHHSCCEEEESCCCSSC--CHHHHHHHHHHHCTTTHHH
T ss_pred HHHHHHHHHHHHHhCCCc-eEEE--EECHHHHHHHHHHHHhCHHhhceEEEecccccCC--CchHHHHhhhccCcchHHH
Confidence 999999999999999986 5666 77776 5788999999 99999999997532111 1111111100 00000000
Q ss_pred hhHHHHHHHHHhCCCccccccccccccccccccCCchhH-HH---HHHHhc--chhhhhHhhhcCcCCCCCCCcEEEEEe
Q 022534 168 QNAIMAERFIEAGSPYVLKLDKADVYRLPYLASSGPGFA-LL---EAARKV--NFKDISSRIGAGFSSGSWDKPVLVAWG 241 (295)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~---~~~~~~--~~~~~~~~~~~~~~~~~~~~P~l~i~G 241 (295)
........+..... ............ ...... +. ...... ........+ ..+++|+++++|
T Consensus 152 ~~~~~~~~~~~~~~----~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~l------~~i~~P~lv~~~ 218 (276)
T 2wj6_A 152 GTHGLFDVWLDGHD----EKRVRHHLLEEM---ADYGYDCWGRSGRVIEDAYGRNGSPMQMM------ANLTKTRPIRHI 218 (276)
T ss_dssp HHHHHHHHHHTTBC----CHHHHHHHHTTT---TTCCHHHHHHHHHHHHHHHHHHCCHHHHH------HTCSSCCCEEEE
T ss_pred HHHHHHHHhhcccc----hHHHHHHHHHHh---hhcchhhhhhccchhHHHHhhccchhhHH------hhcCCCceEEEE
Confidence 00001111211100 000000000000 000000 00 000000 000001111 257899999987
Q ss_pred CCCCCCC--cchHHHHHhcCCCCeEEEEecCCCCCCCCCChHHHHHHHHHHHHh
Q 022534 242 ISDKYLP--QSVAEEFQKGNPNVVKLQMIEGAGHMPQEDWPEKVVDGLRYFFLN 293 (295)
Q Consensus 242 ~~D~~~~--~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 293 (295)
..|...+ ....+.+++.+|+ ++++++|+|||++++|+|++|++.|.+||.+
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~p~-a~~~~i~~~gH~~~~e~P~~~~~~i~~Fl~~ 271 (276)
T 2wj6_A 219 FSQPTEPEYEKINSDFAEQHPW-FSYAKLGGPTHFPAIDVPDRAAVHIREFATA 271 (276)
T ss_dssp ECCSCSHHHHHHHHHHHHHCTT-EEEEECCCSSSCHHHHSHHHHHHHHHHHHHH
T ss_pred ecCccchhHHHHHHHHHhhCCC-eEEEEeCCCCCcccccCHHHHHHHHHHHHhh
Confidence 4433222 2345677888987 7999999999999999999999999999975
|
| >1q0r_A RDMC, aclacinomycin methylesterase; anthracycline, hydrolase, polyketide, tailoring enzyme, structural proteomics in europe, spine; HET: AKT 1PE; 1.45A {Streptomyces purpurascens} SCOP: c.69.1.28 PDB: 1q0z_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.7e-33 Score=239.25 Aligned_cols=262 Identities=18% Similarity=0.163 Sum_probs=162.5
Q ss_pred eeEEeCcEEEEEEEcCCCCCCCceEEEEcCCCCCCccchhh-HHHhhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCCHHH
Q 022534 14 SYIKSGEYRWFVRETGSADSRLGTIVFLHGAPSHSYSYRNV-MSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTENE 92 (295)
Q Consensus 14 ~~~~~~~~~~~~~~~g~~~~~~~~vv~lHG~~~~~~~w~~~-~~~l~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~ 92 (295)
.+++.+|.+++|.+.|+++ .|+|||+||+++++..|..+ ++.|+++||+|+++|+||||+|++..+. ...|++++
T Consensus 4 ~~~~~~g~~l~y~~~G~~~--~~~vvllHG~~~~~~~w~~~~~~~L~~~G~~vi~~D~rG~G~S~~~~~~--~~~~~~~~ 79 (298)
T 1q0r_A 4 RIVPSGDVELWSDDFGDPA--DPALLLVMGGNLSALGWPDEFARRLADGGLHVIRYDHRDTGRSTTRDFA--AHPYGFGE 79 (298)
T ss_dssp EEEEETTEEEEEEEESCTT--SCEEEEECCTTCCGGGSCHHHHHHHHTTTCEEEEECCTTSTTSCCCCTT--TSCCCHHH
T ss_pred ceeccCCeEEEEEeccCCC--CCeEEEEcCCCCCccchHHHHHHHHHhCCCEEEeeCCCCCCCCCCCCCC--cCCcCHHH
Confidence 5778899999999998543 36999999999999999875 4899877899999999999999972211 12468999
Q ss_pred HHHHHHHHHHHhCCCCceEEEEecccch-HHHHHHHHhCcCccceeEEEcCCCCCC-C---------------CCchhhh
Q 022534 93 FHEELDKLLDVLEVKYPFFLVVQGFLVG-SYGLTWALKNPSRISKLAILNSPLTAS-S---------------PLPGLFQ 155 (295)
Q Consensus 93 ~~~~l~~~~~~l~~~~~~~lv~~G~~~G-~~~~~~a~~~p~~v~~lil~~~p~~~~-~---------------~~~~~~~ 155 (295)
+++|+.++++++++++ ++++ |||+| .+++.+|.++|++|+++|+++++.... . ..+....
T Consensus 80 ~a~dl~~~l~~l~~~~-~~lv--GhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (298)
T 1q0r_A 80 LAADAVAVLDGWGVDR-AHVV--GLSMGATITQVIALDHHDRLSSLTMLLGGGLDIDFDANIERVMRGEPTLDGLPGPQQ 156 (298)
T ss_dssp HHHHHHHHHHHTTCSS-EEEE--EETHHHHHHHHHHHHCGGGEEEEEEESCCCTTCCHHHHHHHHHHTCCCSSCSCCCCH
T ss_pred HHHHHHHHHHHhCCCc-eEEE--EeCcHHHHHHHHHHhCchhhheeEEecccCCCcccccchhhhhhhhhhhcccccccH
Confidence 9999999999999875 6666 77776 568889999999999999997644111 0 0000000
Q ss_pred hhhcccchhh--hhhhHHHHHHHHH-----hCCCccccccc-ccccccccccc-CCchhHHHHHHHhcchhhhhHhhhcC
Q 022534 156 QLRIPLLGEF--TAQNAIMAERFIE-----AGSPYVLKLDK-ADVYRLPYLAS-SGPGFALLEAARKVNFKDISSRIGAG 226 (295)
Q Consensus 156 ~~~~~~~~~~--~~~~~~~~~~~~~-----~~~~~~~~~~~-~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (295)
.....+.... ..........+.. ........... .......+... ...+.. ..........+....
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~---- 231 (298)
T 1q0r_A 157 PFLDALALMNQPAEGRAAEVAKRVSKWRILSGTGVPFDDAEYARWEERAIDHAGGVLAEP-YAHYSLTLPPPSRAA---- 231 (298)
T ss_dssp HHHHHHHHHHSCCCSHHHHHHHHHHHHHHHHCSSSCCCHHHHHHHHHHHHHHTTTCCSCC-CGGGGCCCCCGGGGG----
T ss_pred HHHHHHhccCcccccHHHHHHHHHHhhhhccCCCCCCCHHHHHHHHHHHhhccCCccchh-hhhhhhhcCcccccc----
Confidence 0000000000 0000000000000 00000000000 00000000000 000000 000000000000011
Q ss_pred cCCCCCCCcEEEEEeCCCCCCCcchHHHHHhcCCCCeEEEEecCCCCCCCCCChHHHHHHHHHHHHh
Q 022534 227 FSSGSWDKPVLVAWGISDKYLPQSVAEEFQKGNPNVVKLQMIEGAGHMPQEDWPEKVVDGLRYFFLN 293 (295)
Q Consensus 227 ~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 293 (295)
..+++++|+|+|+|++|.+++++.++.+++.+|+ ++++++|++|| |+|++|++.|.+||.+
T Consensus 232 -~l~~i~~P~Lvi~G~~D~~~~~~~~~~~~~~~p~-~~~~~i~~~gH----e~p~~~~~~i~~fl~~ 292 (298)
T 1q0r_A 232 -ELREVTVPTLVIQAEHDPIAPAPHGKHLAGLIPT-ARLAEIPGMGH----ALPSSVHGPLAEVILA 292 (298)
T ss_dssp -GGGGCCSCEEEEEETTCSSSCTTHHHHHHHTSTT-EEEEEETTCCS----SCCGGGHHHHHHHHHH
T ss_pred -cccccCCCEEEEEeCCCccCCHHHHHHHHHhCCC-CEEEEcCCCCC----CCcHHHHHHHHHHHHH
Confidence 0236789999999999999999999999999997 79999999999 8899999999999975
|
| >1u2e_A 2-hydroxy-6-ketonona-2,4-dienedioic acid hydrolase; alpha/beta hydrolase fold; 2.10A {Escherichia coli} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.4e-33 Score=239.59 Aligned_cols=267 Identities=17% Similarity=0.286 Sum_probs=171.1
Q ss_pred ccccccccccceeeEEeC--c--EEEEEEEcCCCCCCCceEEEEcCCC---CCCccchhhH-HHhhhCCCeEEEeCCCCC
Q 022534 2 ISRIENKGREYGSYIKSG--E--YRWFVRETGSADSRLGTIVFLHGAP---SHSYSYRNVM-SQMSDAGFHCFAPDWLGF 73 (295)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~--~--~~~~~~~~g~~~~~~~~vv~lHG~~---~~~~~w~~~~-~~l~~~~~~via~Dl~G~ 73 (295)
.+.-..+....+.|++++ | .+++|.+.|++ .++|||+||++ +++..|..++ +.|++ +|+|+++|+|||
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~g~~~~l~y~~~g~g---~~~vvllHG~~~~~~~~~~~~~~~~~~l~~-~~~vi~~D~~G~ 77 (289)
T 1u2e_A 2 MSYQPQTEAATSRFLNVEEAGKTLRIHFNDCGQG---DETVVLLHGSGPGATGWANFSRNIDPLVEA-GYRVILLDCPGW 77 (289)
T ss_dssp --CCCCCHHHHEEEEEEEETTEEEEEEEEEECCC---SSEEEEECCCSTTCCHHHHTTTTHHHHHHT-TCEEEEECCTTS
T ss_pred CccccccccccceEEEEcCCCcEEEEEEeccCCC---CceEEEECCCCcccchhHHHHHhhhHHHhc-CCeEEEEcCCCC
Confidence 334444555568899998 9 99999998863 23899999997 6777899999 88986 699999999999
Q ss_pred CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCceEEEEecccch-HHHHHHHHhCcCccceeEEEcCCCCCCCCC--
Q 022534 74 GFSDKPEKGYDDFDFTENEFHEELDKLLDVLEVKYPFFLVVQGFLVG-SYGLTWALKNPSRISKLAILNSPLTASSPL-- 150 (295)
Q Consensus 74 G~S~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~~lv~~G~~~G-~~~~~~a~~~p~~v~~lil~~~p~~~~~~~-- 150 (295)
|+|+.+.. ..|+++++++++.++++++++++ ++|+ |||+| .+++.+|.++|++|+++|+++++.......
T Consensus 78 G~S~~~~~----~~~~~~~~~~~l~~~l~~l~~~~-~~lv--GhS~GG~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~ 150 (289)
T 1u2e_A 78 GKSDSVVN----SGSRSDLNARILKSVVDQLDIAK-IHLL--GNSMGGHSSVAFTLKWPERVGKLVLMGGGTGGMSLFTP 150 (289)
T ss_dssp TTSCCCCC----SSCHHHHHHHHHHHHHHHTTCCC-EEEE--EETHHHHHHHHHHHHCGGGEEEEEEESCSCCCCCSSSC
T ss_pred CCCCCCCc----cccCHHHHHHHHHHHHHHhCCCc-eEEE--EECHhHHHHHHHHHHCHHhhhEEEEECCCccccccccc
Confidence 99997542 14578999999999999999875 6676 67766 568889999999999999997644321111
Q ss_pred -c-hhhhhhhcccchhhhhhhHHHHHHHHHhC--CCcccccccccccccccc-ccCCchh--HHHHHHHhc--chhhhhH
Q 022534 151 -P-GLFQQLRIPLLGEFTAQNAIMAERFIEAG--SPYVLKLDKADVYRLPYL-ASSGPGF--ALLEAARKV--NFKDISS 221 (295)
Q Consensus 151 -~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~-~~~~~~~--~~~~~~~~~--~~~~~~~ 221 (295)
+ ....... .. +..........+.... .+.... .+.....+. ....+.. .+....... ...+...
T Consensus 151 ~~~~~~~~~~-~~---~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (289)
T 1u2e_A 151 MPTEGIKRLN-QL---YRQPTIENLKLMMDIFVFDTSDLT---DALFEARLNNMLSRRDHLENFVKSLEANPKQFPDFGP 223 (289)
T ss_dssp SSCHHHHHHH-HH---HHSCCHHHHHHHHHTTSSCTTSCC---HHHHHHHHHHHHHTHHHHHHHHHHHHHCSCCSCCCGG
T ss_pred cchhhHHHHH-HH---HhcchHHHHHHHHHHhhcCcccCC---HHHHHHHHHHhhcChhHHHHHHHHHHhccccccchhh
Confidence 1 0000000 00 0000000011111110 000000 000000000 0000000 000000000 0000001
Q ss_pred hhhcCcCCCCCCCcEEEEEeCCCCCCCcchHHHHHhcCCCCeEEEEecCCCCCCCCCChHHHHHHHHHHHHh
Q 022534 222 RIGAGFSSGSWDKPVLVAWGISDKYLPQSVAEEFQKGNPNVVKLQMIEGAGHMPQEDWPEKVVDGLRYFFLN 293 (295)
Q Consensus 222 ~~~~~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 293 (295)
...++++|+|+|+|++|.+++++.+.++.+.+++ ++++++++|||++++|+|++|++.|.+|+.+
T Consensus 224 ------~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~-~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 288 (289)
T 1u2e_A 224 ------RLAEIKAQTLIVWGRNDRFVPMDAGLRLLSGIAG-SELHIFRDCGHWAQWEHADAFNQLVLNFLAR 288 (289)
T ss_dssp ------GGGGCCSCEEEEEETTCSSSCTHHHHHHHHHSTT-CEEEEESSCCSCHHHHTHHHHHHHHHHHHTC
T ss_pred ------HHhhcCCCeEEEeeCCCCccCHHHHHHHHhhCCC-cEEEEeCCCCCchhhcCHHHHHHHHHHHhcC
Confidence 1236789999999999999999999999999987 7999999999999999999999999999863
|
| >1hkh_A Gamma lactamase; hydrolase, alpha/beta hydrolase, CO-factor free haloperoxidase,; 1.73A {Microbacterium} SCOP: c.69.1.12 PDB: 1hl7_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.7e-33 Score=237.91 Aligned_cols=254 Identities=21% Similarity=0.289 Sum_probs=161.3
Q ss_pred EeCcEEEEEEEcCCCCCCCceEEEEcCCCCCCccchhhHHHhhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCCHHHHHHH
Q 022534 17 KSGEYRWFVRETGSADSRLGTIVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEE 96 (295)
Q Consensus 17 ~~~~~~~~~~~~g~~~~~~~~vv~lHG~~~~~~~w~~~~~~l~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~ 96 (295)
+.+|.+++|.+.|++ +||||+||+++++..|..+++.|+++||+|+++|+||||+|+.+.. .|+.+++++|
T Consensus 9 ~~~g~~l~y~~~g~~----~pvvllHG~~~~~~~~~~~~~~L~~~g~~vi~~D~~G~G~S~~~~~-----~~~~~~~~~d 79 (279)
T 1hkh_A 9 NSTPIELYYEDQGSG----QPVVLIHGYPLDGHSWERQTRELLAQGYRVITYDRRGFGGSSKVNT-----GYDYDTFAAD 79 (279)
T ss_dssp TTEEEEEEEEEESSS----EEEEEECCTTCCGGGGHHHHHHHHHTTEEEEEECCTTSTTSCCCSS-----CCSHHHHHHH
T ss_pred CCCCeEEEEEecCCC----CcEEEEcCCCchhhHHhhhHHHHHhCCcEEEEeCCCCCCCCCCCCC-----CCCHHHHHHH
Confidence 457899999988842 4799999999999999999999988789999999999999997542 3588999999
Q ss_pred HHHHHHHhCCCCceEEEEecccch-HHHHHHHHhCcC-ccceeEEEcCCCCCC--CC-Cchhh-hhhhcccchhhhhh-h
Q 022534 97 LDKLLDVLEVKYPFFLVVQGFLVG-SYGLTWALKNPS-RISKLAILNSPLTAS--SP-LPGLF-QQLRIPLLGEFTAQ-N 169 (295)
Q Consensus 97 l~~~~~~l~~~~~~~lv~~G~~~G-~~~~~~a~~~p~-~v~~lil~~~p~~~~--~~-~~~~~-~~~~~~~~~~~~~~-~ 169 (295)
+.+++++++.++ ++|+ |||+| .+++.+|.++|+ +|+++|+++++.... .. .+... ......+....... .
T Consensus 80 l~~~l~~l~~~~-~~lv--GhS~Gg~va~~~a~~~p~~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (279)
T 1hkh_A 80 LHTVLETLDLRD-VVLV--GFSMGTGELARYVARYGHERVAKLAFLASLEPFLVQRDDNPEGVPQEVFDGIEAAAKGDRF 156 (279)
T ss_dssp HHHHHHHHTCCS-EEEE--EETHHHHHHHHHHHHHCSTTEEEEEEESCCCSBCBCBTTBTTSBCHHHHHHHHHHHHHCHH
T ss_pred HHHHHHhcCCCc-eEEE--EeChhHHHHHHHHHHcCccceeeEEEEccCCcccccCcCCcCCCcHHHHHHHHHHhhhhhh
Confidence 999999999875 6676 77776 578888999999 999999986522110 00 00000 00000000000000 0
Q ss_pred HH---HHHHHHHhC--CCccccccccccccccccccCCchh-HHHHHHHhcchhhhhHhhhcCcCCCCC---CCcEEEEE
Q 022534 170 AI---MAERFIEAG--SPYVLKLDKADVYRLPYLASSGPGF-ALLEAARKVNFKDISSRIGAGFSSGSW---DKPVLVAW 240 (295)
Q Consensus 170 ~~---~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~P~l~i~ 240 (295)
.. ....+.... ............+............ ...... ..+....+. ++ ++|+|+|+
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~---------~i~~~~~P~lii~ 226 (279)
T 1hkh_A 157 AWFTDFYKNFYNLDENLGSRISEQAVTGSWNVAIGSAPVAAYAVVPAW-IEDFRSDVE---------AVRAAGKPTLILH 226 (279)
T ss_dssp HHHHHHHHHHHTHHHHBTTTBCHHHHHHHHHHHHTSCTTHHHHTHHHH-TCBCHHHHH---------HHHHHCCCEEEEE
T ss_pred hhHHHHHhhhhhcccCCcccccHHHHHhhhhhhccCcHHHHHHHHHHH-hhchhhhHH---------HhccCCCCEEEEE
Confidence 00 000111000 0000000000000000000000000 000001 111111111 45 89999999
Q ss_pred eCCCCCCCcchH-HHHHhcCCCCeEEEEecCCCCCCCCCChHHHHHHHHHHHHh
Q 022534 241 GISDKYLPQSVA-EEFQKGNPNVVKLQMIEGAGHMPQEDWPEKVVDGLRYFFLN 293 (295)
Q Consensus 241 G~~D~~~~~~~~-~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 293 (295)
|++|.+++++.+ +.+.+.+++ +++++++++||++++|+|++|++.|.+|+..
T Consensus 227 G~~D~~~~~~~~~~~~~~~~~~-~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 279 (279)
T 1hkh_A 227 GTKDNILPIDATARRFHQAVPE-ADYVEVEGAPHGLLWTHADEVNAALKTFLAK 279 (279)
T ss_dssp ETTCSSSCTTTTHHHHHHHCTT-SEEEEETTCCTTHHHHTHHHHHHHHHHHHHC
T ss_pred cCCCccCChHHHHHHHHHhCCC-eeEEEeCCCCccchhcCHHHHHHHHHHHhhC
Confidence 999999998876 888888987 7999999999999999999999999999863
|
| >3bf7_A Esterase YBFF; thioesterase, helical CAP, hydrolase; 1.10A {Escherichia coli} PDB: 3bf8_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-32 Score=231.70 Aligned_cols=248 Identities=16% Similarity=0.240 Sum_probs=158.4
Q ss_pred EEEEEEcCCCC-CCCceEEEEcCCCCCCccchhhHHHhhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH
Q 022534 22 RWFVRETGSAD-SRLGTIVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEELDKL 100 (295)
Q Consensus 22 ~~~~~~~g~~~-~~~~~vv~lHG~~~~~~~w~~~~~~l~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~l~~~ 100 (295)
+++|.+.|+++ ..+++|||+||+++++..|..+++.|++ +|+|+++|+||||+|+.+. .++.+++++|+.++
T Consensus 2 ~l~y~~~G~~~~~~~~~vvllHG~~~~~~~w~~~~~~L~~-~~~via~Dl~G~G~S~~~~------~~~~~~~a~dl~~~ 74 (255)
T 3bf7_A 2 KLNIRAQTAQNQHNNSPIVLVHGLFGSLDNLGVLARDLVN-DHNIIQVDVRNHGLSPREP------VMNYPAMAQDLVDT 74 (255)
T ss_dssp CCCEEEECCSSCCCCCCEEEECCTTCCTTTTHHHHHHHTT-TSCEEEECCTTSTTSCCCS------CCCHHHHHHHHHHH
T ss_pred ceeeeecCccccCCCCCEEEEcCCcccHhHHHHHHHHHHh-hCcEEEecCCCCCCCCCCC------CcCHHHHHHHHHHH
Confidence 46788888531 1247899999999999999999999986 5999999999999998643 24778999999999
Q ss_pred HHHhCCCCceEEEEecccch-HHHHHHHHhCcCccceeEEEcC-CCCCCCC-CchhhhhhhcccchhhhhhhHHHHHHHH
Q 022534 101 LDVLEVKYPFFLVVQGFLVG-SYGLTWALKNPSRISKLAILNS-PLTASSP-LPGLFQQLRIPLLGEFTAQNAIMAERFI 177 (295)
Q Consensus 101 ~~~l~~~~~~~lv~~G~~~G-~~~~~~a~~~p~~v~~lil~~~-p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (295)
++++++++ ++|+ |||+| .+++.+|.++|++|+++|++++ |...... ....+..+......... .......++
T Consensus 75 l~~l~~~~-~~lv--GhS~Gg~va~~~a~~~p~~v~~lvl~~~~p~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~ 149 (255)
T 3bf7_A 75 LDALQIDK-ATFI--GHSMGGKAVMALTALAPDRIDKLVAIDIAPVDYHVRRHDEIFAAINAVSESDAQ--TRQQAAAIM 149 (255)
T ss_dssp HHHHTCSC-EEEE--EETHHHHHHHHHHHHCGGGEEEEEEESCCSSCCCSCCCHHHHHHHHHHHHSCCC--SHHHHHHHH
T ss_pred HHHcCCCC-eeEE--eeCccHHHHHHHHHhCcHhhccEEEEcCCcccCCcccHHHHHHHHHhccccccc--cHHHHHHHH
Confidence 99999875 6676 77776 5788899999999999999864 3221111 11111100000000000 000000111
Q ss_pred HhCCCcccccccccccccccccc-CCchhHHHHHHHhcchhhhhHhhhcCcCCCCCCCcEEEEEeCCCCCCCcchHHHHH
Q 022534 178 EAGSPYVLKLDKADVYRLPYLAS-SGPGFALLEAARKVNFKDISSRIGAGFSSGSWDKPVLVAWGISDKYLPQSVAEEFQ 256 (295)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~ 256 (295)
..... ...........+... ..... .... .....+...-...++++|+|+|+|++|.+++++.++.++
T Consensus 150 ~~~~~---~~~~~~~~~~~~~~~~~~~~~---~~~~-----~~~~~~~~~~~l~~i~~P~l~i~G~~D~~~~~~~~~~~~ 218 (255)
T 3bf7_A 150 RQHLN---EEGVIQFLLKSFVDGEWRFNV---PVLW-----DQYPHIVGWEKIPAWDHPALFIPGGNSPYVSEQYRDDLL 218 (255)
T ss_dssp TTTCC---CHHHHHHHHTTEETTEESSCH---HHHH-----HTHHHHHCCCCCCCCCSCEEEECBTTCSTTCGGGHHHHH
T ss_pred hhhcc---hhHHHHHHHHhccCCceeecH---HHHH-----hhhhhccccccccccCCCeEEEECCCCCCCCHHHHHHHH
Confidence 00000 000000000000000 00000 0000 000111100012378999999999999999999999999
Q ss_pred hcCCCCeEEEEecCCCCCCCCCChHHHHHHHHHHHHh
Q 022534 257 KGNPNVVKLQMIEGAGHMPQEDWPEKVVDGLRYFFLN 293 (295)
Q Consensus 257 ~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 293 (295)
+.+++ +++++++++||++++|+|++|++.|.+|+.+
T Consensus 219 ~~~~~-~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 254 (255)
T 3bf7_A 219 AQFPQ-ARAHVIAGAGHWVHAEKPDAVLRAIRRYLND 254 (255)
T ss_dssp HHCTT-EEECCBTTCCSCHHHHCHHHHHHHHHHHHHT
T ss_pred HHCCC-CeEEEeCCCCCccccCCHHHHHHHHHHHHhc
Confidence 99997 7999999999999999999999999999964
|
| >3kda_A CFTR inhibitory factor (CIF); alpha/beta hydrolase, hydrolase; 1.50A {Pseudomonas aeruginosa ucbpp-pa14} PDB: 3kd2_A 3pi6_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-32 Score=235.37 Aligned_cols=266 Identities=19% Similarity=0.270 Sum_probs=170.7
Q ss_pred cccceeeEEeCcEEEEEEEcCCCCCCCceEEEEcCCCCCCccchhhHHHhhhCCCeEEEeCCCCCCCCCCCCCCCCCCCC
Q 022534 9 GREYGSYIKSGEYRWFVRETGSADSRLGTIVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDF 88 (295)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~vv~lHG~~~~~~~w~~~~~~l~~~~~~via~Dl~G~G~S~~~~~~~~~~~~ 88 (295)
......+++.+|.+++|.+.|. .|+|||+||+++++..|..+++.|++. |+|+++|+||||.|+.+.. .|
T Consensus 8 ~~~~~~~~~~~g~~l~~~~~g~----~~~vv~lHG~~~~~~~~~~~~~~L~~~-~~vi~~D~~G~G~S~~~~~-----~~ 77 (301)
T 3kda_A 8 NGFESAYREVDGVKLHYVKGGQ----GPLVMLVHGFGQTWYEWHQLMPELAKR-FTVIAPDLPGLGQSEPPKT-----GY 77 (301)
T ss_dssp TTCEEEEEEETTEEEEEEEEES----SSEEEEECCTTCCGGGGTTTHHHHTTT-SEEEEECCTTSTTCCCCSS-----CS
T ss_pred cccceEEEeeCCeEEEEEEcCC----CCEEEEECCCCcchhHHHHHHHHHHhc-CeEEEEcCCCCCCCCCCCC-----Cc
Confidence 3455678999999999999883 369999999999999999999999875 9999999999999997632 45
Q ss_pred CHHHHHHHHHHHHHHhCCCCceEEEEecccch-HHHHHHHHhCcCccceeEEEcCCCCCCCCCc--hhhh----------
Q 022534 89 TENEFHEELDKLLDVLEVKYPFFLVVQGFLVG-SYGLTWALKNPSRISKLAILNSPLTASSPLP--GLFQ---------- 155 (295)
Q Consensus 89 ~~~~~~~~l~~~~~~l~~~~~~~lv~~G~~~G-~~~~~~a~~~p~~v~~lil~~~p~~~~~~~~--~~~~---------- 155 (295)
+.+++++++.+++++++.++|++++ |||+| .+++.+|.++|++|+++|+++++........ ....
T Consensus 78 ~~~~~~~~l~~~l~~l~~~~p~~lv--GhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (301)
T 3kda_A 78 SGEQVAVYLHKLARQFSPDRPFDLV--AHDIGIWNTYPMVVKNQADIARLVYMEAPIPDARIYRFPAFTAQGESLVWHFS 155 (301)
T ss_dssp SHHHHHHHHHHHHHHHCSSSCEEEE--EETHHHHTTHHHHHHCGGGEEEEEEESSCCSSGGGGGSBSEETTEECSSTHHH
T ss_pred cHHHHHHHHHHHHHHcCCCccEEEE--EeCccHHHHHHHHHhChhhccEEEEEccCCCCCCccchhhhcchhhhhhhhHH
Confidence 8899999999999999988767777 66766 4688899999999999999976532211000 0000
Q ss_pred hhhc-ccchh-hhhh-hHHHHHHHHHhCC--CccccccccccccccccccCCchh--HHHHHHHhcchhhhhHhhhcCcC
Q 022534 156 QLRI-PLLGE-FTAQ-NAIMAERFIEAGS--PYVLKLDKADVYRLPYLASSGPGF--ALLEAARKVNFKDISSRIGAGFS 228 (295)
Q Consensus 156 ~~~~-~~~~~-~~~~-~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 228 (295)
.... +.... +... .......+..... +..........+. .....++. .......... ............
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 231 (301)
T 3kda_A 156 FFAADDRLAETLIAGKERFFLEHFIKSHASNTEVFSERLLDLYA---RSYAKPHSLNASFEYYRALN-ESVRQNAELAKT 231 (301)
T ss_dssp HHHCSTTHHHHHHTTCHHHHHHHHHHHTCSSGGGSCHHHHHHHH---HHHTSHHHHHHHHHHHHTHH-HHHHHHHHHTTS
T ss_pred HhhcCcchHHHHhccchHHHHHHHHHhccCCcccCCHHHHHHHH---HHhccccccchHHHHHHhhc-cchhhcccchhh
Confidence 0000 00000 0000 0001111211110 0000000000000 00001110 0111111000 000011111111
Q ss_pred CCCCCCcEEEEEeCCCCCCCcchHHHHHhcCCCCeEEEEecCCCCCCCCCChHHHHHHHHHHHHh
Q 022534 229 SGSWDKPVLVAWGISDKYLPQSVAEEFQKGNPNVVKLQMIEGAGHMPQEDWPEKVVDGLRYFFLN 293 (295)
Q Consensus 229 ~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 293 (295)
.+++++|+|+|+|++| ++......+.+..++ +++++++++||++++|+|++|++.|++|+..
T Consensus 232 l~~i~~P~l~i~G~~D--~~~~~~~~~~~~~~~-~~~~~i~~~gH~~~~e~p~~~~~~i~~~l~~ 293 (301)
T 3kda_A 232 RLQMPTMTLAGGGAGG--MGTFQLEQMKAYAED-VEGHVLPGCGHWLPEECAAPMNRLVIDFLSR 293 (301)
T ss_dssp CBCSCEEEEEECSTTS--CTTHHHHHHHTTBSS-EEEEEETTCCSCHHHHTHHHHHHHHHHHHTT
T ss_pred ccccCcceEEEecCCC--CChhHHHHHHhhccc-CeEEEcCCCCcCchhhCHHHHHHHHHHHHhh
Confidence 2278999999999999 677788889888887 7999999999999999999999999999975
|
| >3bwx_A Alpha/beta hydrolase; YP_496220.1, joint center for structural genomics, protein structure initiative, PSI-2; HET: MSE; 1.50A {Novosphingobium aromaticivorans} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.1e-33 Score=239.19 Aligned_cols=260 Identities=17% Similarity=0.239 Sum_probs=163.3
Q ss_pred cceeeEEeCcEEEEEEEcCCCCCCCceEEEEcCCCCCCccchhhHHHhhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCCH
Q 022534 11 EYGSYIKSGEYRWFVRETGSADSRLGTIVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTE 90 (295)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~g~~~~~~~~vv~lHG~~~~~~~w~~~~~~l~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~ 90 (295)
+...+++.+|.+++|.+.|+++ ++++|||+||+++++..|..+++.|++ +|+|+++|+||||+|+++.. ...|++
T Consensus 6 ~~~~~~~~~g~~l~~~~~g~~~-~~~~vvllHG~~~~~~~~~~~~~~L~~-~~~vi~~Dl~G~G~S~~~~~---~~~~~~ 80 (285)
T 3bwx_A 6 EDRYWTSSDGLRLHFRAYEGDI-SRPPVLCLPGLTRNARDFEDLATRLAG-DWRVLCPEMRGRGDSDYAKD---PMTYQP 80 (285)
T ss_dssp EEEEEECTTSCEEEEEEECBCT-TSCCEEEECCTTCCGGGGHHHHHHHBB-TBCEEEECCTTBTTSCCCSS---GGGCSH
T ss_pred ccCeeecCCCceEEEEEcCCCC-CCCcEEEECCCCcchhhHHHHHHHhhc-CCEEEeecCCCCCCCCCCCC---ccccCH
Confidence 4456777899999999998653 246899999999999999999999986 89999999999999997531 124688
Q ss_pred HHHHHHHHHHHHHhCCCCceEEEEecccch-HHHHHHHHhCcCccceeEEEcCCCCCCCCCchhhhhhh-----cccchh
Q 022534 91 NEFHEELDKLLDVLEVKYPFFLVVQGFLVG-SYGLTWALKNPSRISKLAILNSPLTASSPLPGLFQQLR-----IPLLGE 164 (295)
Q Consensus 91 ~~~~~~l~~~~~~l~~~~~~~lv~~G~~~G-~~~~~~a~~~p~~v~~lil~~~p~~~~~~~~~~~~~~~-----~~~~~~ 164 (295)
+++++|+.++++++++++ ++|+ |||+| .+++.+|.++|++|+++|++++..... +....... .+....
T Consensus 81 ~~~a~dl~~~l~~l~~~~-~~lv--GhS~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~---~~~~~~~~~~~~~~~~~~~ 154 (285)
T 3bwx_A 81 MQYLQDLEALLAQEGIER-FVAI--GTSLGGLLTMLLAAANPARIAAAVLNDVGPEVS---PEGLERIRGYVGQGRNFET 154 (285)
T ss_dssp HHHHHHHHHHHHHHTCCS-EEEE--EETHHHHHHHHHHHHCGGGEEEEEEESCCSSCC---HHHHHHHHHHTTCCCEESS
T ss_pred HHHHHHHHHHHHhcCCCc-eEEE--EeCHHHHHHHHHHHhCchheeEEEEecCCcccC---cchhHHHHHHhcCCccccc
Confidence 999999999999999875 6676 77776 578889999999999999986422110 11010000 000000
Q ss_pred hhhhhHHHHHHHHHhCCCcccccc----cccccccc----ccccCCchhHHHHHHHhc----chhhhhHhhhcCcCCCCC
Q 022534 165 FTAQNAIMAERFIEAGSPYVLKLD----KADVYRLP----YLASSGPGFALLEAARKV----NFKDISSRIGAGFSSGSW 232 (295)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~----~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~ 232 (295)
....... .........+...... ....+... .....++. +....... ...+....+ .++
T Consensus 155 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~------~~~ 225 (285)
T 3bwx_A 155 WMHAARA-LQESSGDVYPDWDITQWLRYAKRIMVLGSSGRIAFDYDMK--IAEPFEAPVGATPQVDMWPLF------DAL 225 (285)
T ss_dssp HHHHHHH-HHHHHTTTSTTCCHHHHHHHHHHHEEECTTSCEEESBCGG--GGCCTTSCTTCCCSSCCHHHH------HHH
T ss_pred HHHHHHH-HHHhhhhcccccChHHHHHHHHhhheeCCCCceeeccCHH--HHHHHhhhhhccccchhhHHH------HHc
Confidence 0000000 0000000000000000 00000000 00000000 00000000 000000000 022
Q ss_pred -CCcEEEEEeCCCCCCCcchHHHHHhcCCCCeEEEEecCCCCCCCCCChHHHHHHHHHHHHh
Q 022534 233 -DKPVLVAWGISDKYLPQSVAEEFQKGNPNVVKLQMIEGAGHMPQEDWPEKVVDGLRYFFLN 293 (295)
Q Consensus 233 -~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 293 (295)
++|+|+|+|++|.+++++.++++++. ++ +++++++++||++++|+|+.+ +.|.+||.+
T Consensus 226 ~~~P~lii~G~~D~~~~~~~~~~~~~~-~~-~~~~~i~~~gH~~~~e~p~~~-~~i~~fl~~ 284 (285)
T 3bwx_A 226 ATRPLLVLRGETSDILSAQTAAKMASR-PG-VELVTLPRIGHAPTLDEPESI-AAIGRLLER 284 (285)
T ss_dssp TTSCEEEEEETTCSSSCHHHHHHHHTS-TT-EEEEEETTCCSCCCSCSHHHH-HHHHHHHTT
T ss_pred cCCCeEEEEeCCCCccCHHHHHHHHhC-CC-cEEEEeCCCCccchhhCchHH-HHHHHHHHh
Confidence 69999999999999999888999888 76 899999999999999999988 579999965
|
| >2cjp_A Epoxide hydrolase; HET: PG4 VPR; 1.95A {Solanum tuberosum} PDB: 3cxu_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-32 Score=239.25 Aligned_cols=269 Identities=17% Similarity=0.291 Sum_probs=167.5
Q ss_pred eeeEEeCcEEEEEEEcCCCCCCCceEEEEcCCCCCCccchhhHHHhhhCCCeEEEeCCCCCCCCCCC--CCCCCCCCCCH
Q 022534 13 GSYIKSGEYRWFVRETGSADSRLGTIVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGFGFSDKP--EKGYDDFDFTE 90 (295)
Q Consensus 13 ~~~~~~~~~~~~~~~~g~~~~~~~~vv~lHG~~~~~~~w~~~~~~l~~~~~~via~Dl~G~G~S~~~--~~~~~~~~~~~ 90 (295)
..+++.+|.+++|.+.|+ .|+|||+||+++++..|..+++.|++.||+||++|+||||+|+++ .. ...|++
T Consensus 13 ~~~~~~~g~~l~y~~~G~----g~~vvllHG~~~~~~~w~~~~~~L~~~g~~via~Dl~G~G~S~~~~~~~---~~~~~~ 85 (328)
T 2cjp_A 13 HKMVAVNGLNMHLAELGE----GPTILFIHGFPELWYSWRHQMVYLAERGYRAVAPDLRGYGDTTGAPLND---PSKFSI 85 (328)
T ss_dssp EEEEEETTEEEEEEEECS----SSEEEEECCTTCCGGGGHHHHHHHHTTTCEEEEECCTTSTTCBCCCTTC---GGGGSH
T ss_pred eeEecCCCcEEEEEEcCC----CCEEEEECCCCCchHHHHHHHHHHHHCCcEEEEECCCCCCCCCCcCcCC---cccccH
Confidence 367888999999999884 259999999999999999999999877899999999999999975 21 225788
Q ss_pred HHHHHHHHHHHHHhC--CCCceEEEEecccch-HHHHHHHHhCcCccceeEEEcCCCCCCCC--Cch-hhhhh-hcc-cc
Q 022534 91 NEFHEELDKLLDVLE--VKYPFFLVVQGFLVG-SYGLTWALKNPSRISKLAILNSPLTASSP--LPG-LFQQL-RIP-LL 162 (295)
Q Consensus 91 ~~~~~~l~~~~~~l~--~~~~~~lv~~G~~~G-~~~~~~a~~~p~~v~~lil~~~p~~~~~~--~~~-~~~~~-~~~-~~ 162 (295)
+++++|+.+++++++ +++ ++|+ |||+| .+++.+|.++|++|+++|+++++...... .+. ..... ... ..
T Consensus 86 ~~~a~dl~~~l~~l~~~~~~-~~lv--GhS~Gg~ia~~~A~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (328)
T 2cjp_A 86 LHLVGDVVALLEAIAPNEEK-VFVV--AHDWGALIAWHLCLFRPDKVKALVNLSVHFSKRNPKMNVVEGLKAIYGEDHYI 162 (328)
T ss_dssp HHHHHHHHHHHHHHCTTCSS-EEEE--EETHHHHHHHHHHHHCGGGEEEEEEESCCCCCCCSSCCHHHHHHHHHCTTBHH
T ss_pred HHHHHHHHHHHHHhcCCCCC-eEEE--EECHHHHHHHHHHHhChhheeEEEEEccCCCcccccCChHHHHHhhcccchHH
Confidence 999999999999998 775 6676 67776 57889999999999999999766432211 110 01000 000 00
Q ss_pred hhh----------hh-hhHHHHHHHHHhC--CCccccccccccccc-c----ccccCCc-hhH-HHHHHHhcch------
Q 022534 163 GEF----------TA-QNAIMAERFIEAG--SPYVLKLDKADVYRL-P----YLASSGP-GFA-LLEAARKVNF------ 216 (295)
Q Consensus 163 ~~~----------~~-~~~~~~~~~~~~~--~~~~~~~~~~~~~~~-~----~~~~~~~-~~~-~~~~~~~~~~------ 216 (295)
..+ .. ........+.... .++... ........ . ....... ... +........+
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (328)
T 2cjp_A 163 SRFQVPGEIEAEFAPIGAKSVLKKILTYRDPAPFYFP-KGKGLEAIPDAPVALSSWLSEEELDYYANKFEQTGFTGAVNY 241 (328)
T ss_dssp HHTSSTTHHHHHHHHHCHHHHHHHHHTCCCSSCCBCC-TTCTTTTSCCCCGGGGTTSCHHHHHHHHHHHHHHCSHHHHHH
T ss_pred HhhhCCCcHHHHhhccCHHHHHHHHhcccCCCccccc-ccchhhhcccccccCcCCCCHHHHHHHHHHhcccCCcchHHH
Confidence 000 00 0000111121100 000000 00000000 0 0000000 000 0000000000
Q ss_pred -hhhhH--hhhcCcCCCCCCCcEEEEEeCCCCCCCcch------HHHHHhcCCCCe-EEEEecCCCCCCCCCChHHHHHH
Q 022534 217 -KDISS--RIGAGFSSGSWDKPVLVAWGISDKYLPQSV------AEEFQKGNPNVV-KLQMIEGAGHMPQEDWPEKVVDG 286 (295)
Q Consensus 217 -~~~~~--~~~~~~~~~~~~~P~l~i~G~~D~~~~~~~------~~~~~~~~~~~~-~~~~i~~~gH~~~~e~p~~~~~~ 286 (295)
+.... .........++++|+|+|+|++|.+++++. ++.+.+.+++ + +++++++|||++++|+|++|++.
T Consensus 242 ~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~p~-~~~~~~i~~~gH~~~~e~p~~~~~~ 320 (328)
T 2cjp_A 242 YRALPINWELTAPWTGAQVKVPTKFIVGEFDLVYHIPGAKEYIHNGGFKKDVPL-LEEVVVLEGAAHFVSQERPHEISKH 320 (328)
T ss_dssp HHTHHHHHHHTGGGTTCCCCSCEEEEEETTCGGGGSTTHHHHHHHSHHHHHSTT-BCCCEEETTCCSCHHHHSHHHHHHH
T ss_pred HHhcccchhhhhhccCCccCCCEEEEEeCCcccccCcchhhhhhhhhHHHHhcC-CeeEEEcCCCCCCcchhCHHHHHHH
Confidence 00000 000011234789999999999999988642 2567777886 6 89999999999999999999999
Q ss_pred HHHHHHh
Q 022534 287 LRYFFLN 293 (295)
Q Consensus 287 i~~fl~~ 293 (295)
|.+||.+
T Consensus 321 i~~fl~~ 327 (328)
T 2cjp_A 321 IYDFIQK 327 (328)
T ss_dssp HHHHHTT
T ss_pred HHHHHHh
Confidence 9999975
|
| >2ocg_A Valacyclovir hydrolase; alpha beta hydrolase fold; 1.75A {Homo sapiens} PDB: 2oci_A* 2ock_A 2ocl_A | Back alignment and structure |
|---|
Probab=100.00 E-value=8.4e-33 Score=233.32 Aligned_cols=244 Identities=16% Similarity=0.189 Sum_probs=161.0
Q ss_pred eeEEeCcEEEEEEEcCCCCCCCceEEEEcCCCCC-CccchhhHHHhhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCC---
Q 022534 14 SYIKSGEYRWFVRETGSADSRLGTIVFLHGAPSH-SYSYRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFT--- 89 (295)
Q Consensus 14 ~~~~~~~~~~~~~~~g~~~~~~~~vv~lHG~~~~-~~~w~~~~~~l~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~--- 89 (295)
.+++.+|.+++|.+.|++ +++|||+||++++ +..|..+++.|++.||+|+++|+||||+|+.+.. .|+
T Consensus 5 ~~~~~~g~~l~~~~~g~~---~~~vvllHG~~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~-----~~~~~~ 76 (254)
T 2ocg_A 5 AKVAVNGVQLHYQQTGEG---DHAVLLLPGMLGSGETDFGPQLKNLNKKLFTVVAWDPRGYGHSRPPDR-----DFPADF 76 (254)
T ss_dssp EEEEETTEEEEEEEEECC---SEEEEEECCTTCCHHHHCHHHHHHSCTTTEEEEEECCTTSTTCCSSCC-----CCCTTH
T ss_pred eEEEECCEEEEEEEecCC---CCeEEEECCCCCCCccchHHHHHHHhhCCCeEEEECCCCCCCCCCCCC-----CCChHH
Confidence 567889999999998854 3589999999988 6789999999987789999999999999986532 234
Q ss_pred HHHHHHHHHHHHHHhCCCCceEEEEecccch-HHHHHHHHhCcCccceeEEEcCCCCCCCCCchhhhhhhcccchhhhhh
Q 022534 90 ENEFHEELDKLLDVLEVKYPFFLVVQGFLVG-SYGLTWALKNPSRISKLAILNSPLTASSPLPGLFQQLRIPLLGEFTAQ 168 (295)
Q Consensus 90 ~~~~~~~l~~~~~~l~~~~~~~lv~~G~~~G-~~~~~~a~~~p~~v~~lil~~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (295)
..+.++++.+++++++.++ ++++ |||+| .+++.+|.++|++|+++|+++++.... ........ ........
T Consensus 77 ~~~~~~~~~~~l~~l~~~~-~~l~--GhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~---~~~~~~~~--~~~~~~~~ 148 (254)
T 2ocg_A 77 FERDAKDAVDLMKALKFKK-VSLL--GWSDGGITALIAAAKYPSYIHKMVIWGANAYVT---DEDSMIYE--GIRDVSKW 148 (254)
T ss_dssp HHHHHHHHHHHHHHTTCSS-EEEE--EETHHHHHHHHHHHHCTTTEEEEEEESCCSBCC---HHHHHHHH--TTSCGGGS
T ss_pred HHHHHHHHHHHHHHhCCCC-EEEE--EECHhHHHHHHHHHHChHHhhheeEeccccccC---hhhHHHHH--HHHHHHHH
Confidence 5677889999999998875 6666 77776 578889999999999999987543211 00000000 00000000
Q ss_pred hHHHHHHHHHhCCCccccccccccccccccccCCchhHHHHHHHhcc-hhhhhHhhhcCcCCCCCCCcEEEEEeCCCCCC
Q 022534 169 NAIMAERFIEAGSPYVLKLDKADVYRLPYLASSGPGFALLEAARKVN-FKDISSRIGAGFSSGSWDKPVLVAWGISDKYL 247 (295)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~ 247 (295)
.......+... ... ..... ....+........ ..+. ..... ..+++++|+|+|+|++|.++
T Consensus 149 ~~~~~~~~~~~-----~~~---~~~~~-------~~~~~~~~~~~~~~~~~~-~~~~~--~l~~i~~P~lii~G~~D~~~ 210 (254)
T 2ocg_A 149 SERTRKPLEAL-----YGY---DYFAR-------TCEKWVDGIRQFKHLPDG-NICRH--LLPRVQCPALIVHGEKDPLV 210 (254)
T ss_dssp CHHHHHHHHHH-----HCH---HHHHH-------HHHHHHHHHHGGGGSGGG-BSSGG--GGGGCCSCEEEEEETTCSSS
T ss_pred HHHhHHHHHHH-----hcc---hhhHH-------HHHHHHHHHHHHHhccCC-chhhh--hhhcccCCEEEEecCCCccC
Confidence 00000000000 000 00000 0000111110000 0000 00000 01367899999999999999
Q ss_pred CcchHHHHHhcCCCCeEEEEecCCCCCCCCCChHHHHHHHHHHHH
Q 022534 248 PQSVAEEFQKGNPNVVKLQMIEGAGHMPQEDWPEKVVDGLRYFFL 292 (295)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~ 292 (295)
+++.++.+++.+++ +++++++++||++++|+|++|++.|.+||.
T Consensus 211 ~~~~~~~~~~~~~~-~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~ 254 (254)
T 2ocg_A 211 PRFHADFIHKHVKG-SRLHLMPEGKHNLHLRFADEFNKLAEDFLQ 254 (254)
T ss_dssp CHHHHHHHHHHSTT-CEEEEETTCCTTHHHHTHHHHHHHHHHHHC
T ss_pred CHHHHHHHHHhCCC-CEEEEcCCCCCchhhhCHHHHHHHHHHHhC
Confidence 99999999999987 799999999999999999999999999983
|
| >2xmz_A Hydrolase, alpha/beta hydrolase fold family; menaquinone biosynthesis, lyase; 1.94A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-33 Score=240.24 Aligned_cols=250 Identities=18% Similarity=0.283 Sum_probs=158.7
Q ss_pred CcEEEEEEEcCCCCCCCceEEEEcCCCCCCccchhhHHHhhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH
Q 022534 19 GEYRWFVRETGSADSRLGTIVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEELD 98 (295)
Q Consensus 19 ~~~~~~~~~~g~~~~~~~~vv~lHG~~~~~~~w~~~~~~l~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~l~ 98 (295)
.+++++|.+.|++ +||||+||+++++..|..+++.|++ +|+|+++|+||||+|+.+... .|+.+++++|+.
T Consensus 4 ~~~~~~y~~~G~g----~~vvllHG~~~~~~~~~~~~~~L~~-~~~vi~~Dl~G~G~S~~~~~~----~~~~~~~~~dl~ 74 (269)
T 2xmz_A 4 THYKFYEANVETN----QVLVFLHGFLSDSRTYHNHIEKFTD-NYHVITIDLPGHGEDQSSMDE----TWNFDYITTLLD 74 (269)
T ss_dssp CSEEEECCSSCCS----EEEEEECCTTCCGGGGTTTHHHHHT-TSEEEEECCTTSTTCCCCTTS----CCCHHHHHHHHH
T ss_pred ccceEEEEEcCCC----CeEEEEcCCCCcHHHHHHHHHHHhh-cCeEEEecCCCCCCCCCCCCC----ccCHHHHHHHHH
Confidence 4788999888854 3799999999999999999999986 699999999999999975421 468899999999
Q ss_pred HHHHHhCCCCceEEEEecccch-HHHHHHHHhCcCccceeEEEcCCCCCCCCCchhhhhh-hcc-cchhhhhhh-HHHHH
Q 022534 99 KLLDVLEVKYPFFLVVQGFLVG-SYGLTWALKNPSRISKLAILNSPLTASSPLPGLFQQL-RIP-LLGEFTAQN-AIMAE 174 (295)
Q Consensus 99 ~~~~~l~~~~~~~lv~~G~~~G-~~~~~~a~~~p~~v~~lil~~~p~~~~~~~~~~~~~~-~~~-~~~~~~~~~-~~~~~ 174 (295)
++++++++++ ++|+ |||+| .+++.+|.++|++|+++|+++++..... ........ ..+ +...+.... .....
T Consensus 75 ~~l~~l~~~~-~~lv--GhS~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (269)
T 2xmz_A 75 RILDKYKDKS-ITLF--GYSMGGRVALYYAINGHIPISNLILESTSPGIKE-EANQLERRLVDDARAKVLDIAGIELFVN 150 (269)
T ss_dssp HHHGGGTTSE-EEEE--EETHHHHHHHHHHHHCSSCCSEEEEESCCSCCSS-HHHHHHHHHHHHHHHHHHHHHCHHHHHH
T ss_pred HHHHHcCCCc-EEEE--EECchHHHHHHHHHhCchheeeeEEEcCCcccCC-chhHHHHhhhhhHHHHhhccccHHHHHH
Confidence 9999998874 6676 77776 5788899999999999999975432211 00000000 000 000000000 00001
Q ss_pred HHHHhCCCccccc---cccccc-cc-cccccCCchhHHHHHHHhcc---hhhhhHhhhcCcCCCCCCCcEEEEEeCCCCC
Q 022534 175 RFIEAGSPYVLKL---DKADVY-RL-PYLASSGPGFALLEAARKVN---FKDISSRIGAGFSSGSWDKPVLVAWGISDKY 246 (295)
Q Consensus 175 ~~~~~~~~~~~~~---~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~ 246 (295)
.+.. .+ .... ...... .. .......+ ..+........ ..+.... .+++++|+|+|+|++|.+
T Consensus 151 ~~~~--~~-~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~------l~~i~~P~lii~G~~D~~ 220 (269)
T 2xmz_A 151 DWEK--LP-LFQSQLELPVEIQHQIRQQRLSQSP-HKMAKALRDYGTGQMPNLWPR------LKEIKVPTLILAGEYDEK 220 (269)
T ss_dssp HHTT--SG-GGGGGGGSCHHHHHHHHHHHHTSCH-HHHHHHHHHHSTTTSCCCGGG------GGGCCSCEEEEEETTCHH
T ss_pred HHHh--Cc-cccccccCCHHHHHHHHHHHhccCc-HHHHHHHHHHHhccCccHHHH------HHhcCCCEEEEEeCCCcc
Confidence 1110 00 0000 000000 00 00000000 00000100000 0000011 136789999999999998
Q ss_pred CCcchHHHHHhcCCCCeEEEEecCCCCCCCCCChHHHHHHHHHHHHh
Q 022534 247 LPQSVAEEFQKGNPNVVKLQMIEGAGHMPQEDWPEKVVDGLRYFFLN 293 (295)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 293 (295)
++++..+ +++.+++ +++++++++||++++|+|++|++.|.+|+.+
T Consensus 221 ~~~~~~~-~~~~~~~-~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 265 (269)
T 2xmz_A 221 FVQIAKK-MANLIPN-SKCKLISATGHTIHVEDSDEFDTMILGFLKE 265 (269)
T ss_dssp HHHHHHH-HHHHSTT-EEEEEETTCCSCHHHHSHHHHHHHHHHHHHH
T ss_pred cCHHHHH-HHhhCCC-cEEEEeCCCCCChhhcCHHHHHHHHHHHHHH
Confidence 8777654 8888886 7999999999999999999999999999975
|
| >1j1i_A META cleavage compound hydrolase; carbazole degradation, META cleavage product hydrolase, histidine tagged protein, alpha/beta-hydrolase; 1.86A {Janthinobacterium} SCOP: c.69.1.10 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-32 Score=236.00 Aligned_cols=255 Identities=16% Similarity=0.221 Sum_probs=167.6
Q ss_pred ccceeeEEeCcEEEEEEEcCCCCCCCceEEEEcCCC---CCCccchhhHHHhhhCCCeEEEeCCCCCCCCCCCCCCCCCC
Q 022534 10 REYGSYIKSGEYRWFVRETGSADSRLGTIVFLHGAP---SHSYSYRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDF 86 (295)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~vv~lHG~~---~~~~~w~~~~~~l~~~~~~via~Dl~G~G~S~~~~~~~~~~ 86 (295)
++...+++.+|.+++|.+.|++ ++|||+||++ +++..|..+++.|++ +|+|+++|+||||+|+ +.. .
T Consensus 15 ~~~~~~~~~~g~~l~y~~~g~g----~~vvllHG~~~~~~~~~~~~~~~~~L~~-~~~vi~~Dl~G~G~S~-~~~----~ 84 (296)
T 1j1i_A 15 AYVERFVNAGGVETRYLEAGKG----QPVILIHGGGAGAESEGNWRNVIPILAR-HYRVIAMDMLGFGKTA-KPD----I 84 (296)
T ss_dssp CCEEEEEEETTEEEEEEEECCS----SEEEEECCCSTTCCHHHHHTTTHHHHTT-TSEEEEECCTTSTTSC-CCS----S
T ss_pred CCcceEEEECCEEEEEEecCCC----CeEEEECCCCCCcchHHHHHHHHHHHhh-cCEEEEECCCCCCCCC-CCC----C
Confidence 6678899999999999998852 5899999997 777889999999986 5999999999999999 432 2
Q ss_pred CCCHHHHHHHHHHHHHHhCCCCceEEEEecccch-HHHHHHHHhCcCccceeEEEcCCCCCCCCCchhhhhhhcccchhh
Q 022534 87 DFTENEFHEELDKLLDVLEVKYPFFLVVQGFLVG-SYGLTWALKNPSRISKLAILNSPLTASSPLPGLFQQLRIPLLGEF 165 (295)
Q Consensus 87 ~~~~~~~~~~l~~~~~~l~~~~~~~lv~~G~~~G-~~~~~~a~~~p~~v~~lil~~~p~~~~~~~~~~~~~~~~~~~~~~ 165 (295)
.|+++++++++.+++++++++++++|+ |||+| .+++.+|.++|++|+++|+++++......... ..... ....
T Consensus 85 ~~~~~~~~~dl~~~l~~l~~~~~~~lv--GhS~Gg~ia~~~A~~~p~~v~~lvl~~~~~~~~~~~~~-~~~~~-~~~~-- 158 (296)
T 1j1i_A 85 EYTQDRRIRHLHDFIKAMNFDGKVSIV--GNSMGGATGLGVSVLHSELVNALVLMGSAGLVVEIHED-LRPII-NYDF-- 158 (296)
T ss_dssp CCCHHHHHHHHHHHHHHSCCSSCEEEE--EEHHHHHHHHHHHHHCGGGEEEEEEESCCBCCCC------------CCS--
T ss_pred CCCHHHHHHHHHHHHHhcCCCCCeEEE--EEChhHHHHHHHHHhChHhhhEEEEECCCCCCCCCCch-HHHHh-cccC--
Confidence 468899999999999999983357777 67776 57888999999999999999754322111110 00000 0000
Q ss_pred hhhhHHHHHHHHHh--CCCccccccccccccccccccCCchh--HHHHHHHhc---c-hhhhhHhhhcCcCCCCCCCcEE
Q 022534 166 TAQNAIMAERFIEA--GSPYVLKLDKADVYRLPYLASSGPGF--ALLEAARKV---N-FKDISSRIGAGFSSGSWDKPVL 237 (295)
Q Consensus 166 ~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~---~-~~~~~~~~~~~~~~~~~~~P~l 237 (295)
.... ...+... ..+..... ......+.....+.. .+....... . ..+.... ..++++|+|
T Consensus 159 --~~~~-~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------l~~i~~P~L 226 (296)
T 1j1i_A 159 --TREG-MVHLVKALTNDGFKIDD---AMINSRYTYATDEATRKAYVATMQWIREQGGLFYDPEF------IRKVQVPTL 226 (296)
T ss_dssp --CHHH-HHHHHHHHSCTTCCCCH---HHHHHHHHHHHSHHHHHHHHHHHHHHHHHTSSBCCHHH------HTTCCSCEE
T ss_pred --CchH-HHHHHHHhccCcccccH---HHHHHHHHHhhCcchhhHHHHHHHHHHhcccccccHHH------hhcCCCCEE
Confidence 0000 0011110 00000000 000000000000000 000000000 0 0000011 136799999
Q ss_pred EEEeCCCCCCCcchHHHHHhcCCCCeEEEEecCCCCCCCCCChHHHHHHHHHHHHh
Q 022534 238 VAWGISDKYLPQSVAEEFQKGNPNVVKLQMIEGAGHMPQEDWPEKVVDGLRYFFLN 293 (295)
Q Consensus 238 ~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 293 (295)
+|+|++|.+++++.+..+.+.+++ +++++++++||++++|+|++|++.|.+||..
T Consensus 227 ii~G~~D~~~~~~~~~~~~~~~~~-~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 281 (296)
T 1j1i_A 227 VVQGKDDKVVPVETAYKFLDLIDD-SWGYIIPHCGHWAMIEHPEDFANATLSFLSL 281 (296)
T ss_dssp EEEETTCSSSCHHHHHHHHHHCTT-EEEEEESSCCSCHHHHSHHHHHHHHHHHHHH
T ss_pred EEEECCCcccCHHHHHHHHHHCCC-CEEEEECCCCCCchhcCHHHHHHHHHHHHhc
Confidence 999999999999999999999987 7999999999999999999999999999975
|
| >1c4x_A BPHD, protein (2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoat hydrolase); PCB degradation; 2.40A {Rhodococcus SP} SCOP: c.69.1.10 | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-32 Score=235.05 Aligned_cols=265 Identities=19% Similarity=0.259 Sum_probs=168.4
Q ss_pred cceeeEEeCcEEEEEEEcCCCCCCCceEEEEcCCC---CCCccchhhHHHhhhCCCeEEEeCCCCCCCCCCCCCCCCCCC
Q 022534 11 EYGSYIKSGEYRWFVRETGSADSRLGTIVFLHGAP---SHSYSYRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFD 87 (295)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~g~~~~~~~~vv~lHG~~---~~~~~w~~~~~~l~~~~~~via~Dl~G~G~S~~~~~~~~~~~ 87 (295)
+.+.+++++|.+++|.+.|+.. .|+|||+||++ +++..|..+++.|++ +|+|+++|+||||+|+.+.. ..
T Consensus 7 ~~~~~~~~~g~~l~y~~~g~~g--~p~vvllHG~~~~~~~~~~~~~~~~~L~~-~~~vi~~D~~G~G~S~~~~~----~~ 79 (285)
T 1c4x_A 7 IIEKRFPSGTLASHALVAGDPQ--SPAVVLLHGAGPGAHAASNWRPIIPDLAE-NFFVVAPDLIGFGQSEYPET----YP 79 (285)
T ss_dssp CEEEEECCTTSCEEEEEESCTT--SCEEEEECCCSTTCCHHHHHGGGHHHHHT-TSEEEEECCTTSTTSCCCSS----CC
T ss_pred ccceEEEECCEEEEEEecCCCC--CCEEEEEeCCCCCCcchhhHHHHHHHHhh-CcEEEEecCCCCCCCCCCCC----cc
Confidence 3478899999999999988421 23599999997 777889999999986 59999999999999987542 14
Q ss_pred CCHHHH----HHHHHHHHHHhCCCCceEEEEecccch-HHHHHHHHhCcCccceeEEEcCCCCCCCCCchhhhhhhcccc
Q 022534 88 FTENEF----HEELDKLLDVLEVKYPFFLVVQGFLVG-SYGLTWALKNPSRISKLAILNSPLTASSPLPGLFQQLRIPLL 162 (295)
Q Consensus 88 ~~~~~~----~~~l~~~~~~l~~~~~~~lv~~G~~~G-~~~~~~a~~~p~~v~~lil~~~p~~~~~~~~~~~~~~~~~~~ 162 (295)
|+++++ ++|+.++++++++++ ++|+ |||+| .+++.+|.++|++|+++|+++++.............. ....
T Consensus 80 ~~~~~~~~~~~~dl~~~l~~l~~~~-~~lv--GhS~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~-~~~~ 155 (285)
T 1c4x_A 80 GHIMSWVGMRVEQILGLMNHFGIEK-SHIV--GNSMGGAVTLQLVVEAPERFDKVALMGSVGAPMNARPPELARL-LAFY 155 (285)
T ss_dssp SSHHHHHHHHHHHHHHHHHHHTCSS-EEEE--EETHHHHHHHHHHHHCGGGEEEEEEESCCSSCCSSCCHHHHHH-HTGG
T ss_pred cchhhhhhhHHHHHHHHHHHhCCCc-cEEE--EEChHHHHHHHHHHhChHHhheEEEeccCCCCCCccchhHHHH-HHHh
Confidence 688999 999999999999875 6676 77776 5688899999999999999975432211111111110 0000
Q ss_pred hhhhhhhHHHHHHHHHhC--CCccccccccccccccccccCCchh--HHHHHHH-hcchhhhhHhhhcCcCCCCCCCcEE
Q 022534 163 GEFTAQNAIMAERFIEAG--SPYVLKLDKADVYRLPYLASSGPGF--ALLEAAR-KVNFKDISSRIGAGFSSGSWDKPVL 237 (295)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~P~l 237 (295)
. .........+.... .+.... ...+.....+.....++. .+..... .....+....... ..+++++|+|
T Consensus 156 ~---~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~l~~i~~P~l 229 (285)
T 1c4x_A 156 A---DPRLTPYRELIHSFVYDPENFP-GMEEIVKSRFEVANDPEVRRIQEVMFESMKAGMESLVIPPA--TLGRLPHDVL 229 (285)
T ss_dssp G---SCCHHHHHHHHHTTSSCSTTCT-THHHHHHHHHHHHHCHHHHHHHHHHHHHHSSCCGGGCCCHH--HHTTCCSCEE
T ss_pred c---cccHHHHHHHHHHhhcCccccc-CcHHHHHHHHHhccCHHHHHHHHHHhccccccccccccchh--hhccCCCCEE
Confidence 0 00000011111110 000000 000000000000000100 0000000 0000000000000 0136799999
Q ss_pred EEEeCCCCCCCcchHHHHHhcCCCCeEEEEecCCCCCCCCCChHHHHHHHHHHHHh
Q 022534 238 VAWGISDKYLPQSVAEEFQKGNPNVVKLQMIEGAGHMPQEDWPEKVVDGLRYFFLN 293 (295)
Q Consensus 238 ~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 293 (295)
+|+|++|.+++++.++.+++.+++ +++++++++||++++|+|++|++.|.+||..
T Consensus 230 ii~G~~D~~~p~~~~~~~~~~~~~-~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 284 (285)
T 1c4x_A 230 VFHGRQDRIVPLDTSLYLTKHLKH-AELVVLDRCGHWAQLERWDAMGPMLMEHFRA 284 (285)
T ss_dssp EEEETTCSSSCTHHHHHHHHHCSS-EEEEEESSCCSCHHHHSHHHHHHHHHHHHHC
T ss_pred EEEeCCCeeeCHHHHHHHHHhCCC-ceEEEeCCCCcchhhcCHHHHHHHHHHHHhc
Confidence 999999999999999999999987 7999999999999999999999999999964
|
| >3c6x_A Hydroxynitrilase; atomic resolution, hydroxynitril lyase, catalysis, protonation state, AB initio calculations, substrate bindin; 1.05A {Hevea brasiliensis} SCOP: c.69.1.20 PDB: 1sc9_A 1yas_A* 2g4l_A* 2yas_A 1qj4_A 3c6y_A 3c6z_A 3c70_A 3yas_A 4yas_A 5yas_A* 6yas_A 7yas_A* 1yb6_A* 1yb7_A 1sck_A 1sci_A 1scq_A 1dwo_A 1dwp_A ... | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-32 Score=231.74 Aligned_cols=245 Identities=16% Similarity=0.127 Sum_probs=150.5
Q ss_pred CceEEEEcCCCCCCccchhhHHHhhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCceEEEE
Q 022534 35 LGTIVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEELDKLLDVLEVKYPFFLVV 114 (295)
Q Consensus 35 ~~~vv~lHG~~~~~~~w~~~~~~l~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~~lv~ 114 (295)
+++|||+||++.++..|+.+++.|+++||+|+++|+||||+|+.+.. ..|+++++++|+.+++++++..++++||
T Consensus 3 ~~~vvllHG~~~~~~~w~~~~~~L~~~g~~via~Dl~G~G~S~~~~~----~~~~~~~~a~dl~~~l~~l~~~~~~~lv- 77 (257)
T 3c6x_A 3 FAHFVLIHTICHGAWIWHKLKPLLEALGHKVTALDLAASGVDPRQIE----EIGSFDEYSEPLLTFLEALPPGEKVILV- 77 (257)
T ss_dssp CCEEEEECCTTCCGGGGTTHHHHHHHTTCEEEEECCTTSTTCSCCGG----GCCSHHHHTHHHHHHHHTSCTTCCEEEE-
T ss_pred CCcEEEEcCCccCcCCHHHHHHHHHhCCCEEEEeCCCCCCCCCCCcc----cccCHHHHHHHHHHHHHhccccCCeEEE-
Confidence 35899999999999999999999987789999999999999986421 1368999999999999999632346777
Q ss_pred ecccch-HHHHHHHHhCcCccceeEEEcCCCCCCCCCc-hhhhhhh--cc-cchhhhhhhHHHHHHHHHhC-CCcccccc
Q 022534 115 QGFLVG-SYGLTWALKNPSRISKLAILNSPLTASSPLP-GLFQQLR--IP-LLGEFTAQNAIMAERFIEAG-SPYVLKLD 188 (295)
Q Consensus 115 ~G~~~G-~~~~~~a~~~p~~v~~lil~~~p~~~~~~~~-~~~~~~~--~~-~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 188 (295)
|||+| .+++.+|.++|++|+++|++++......... ....... .+ +...... ..... .+......
T Consensus 78 -GhSmGG~va~~~a~~~p~~v~~lVl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~ 148 (257)
T 3c6x_A 78 -GESCGGLNIAIAADKYCEKIAAAVFHNSVLPDTEHCPSYVVDKLMEVFPDWKDTTYF--------TYTKDGKEITGLKL 148 (257)
T ss_dssp -EEETHHHHHHHHHHHHGGGEEEEEEEEECCCCSSSCTTHHHHHHHHHSCCCTTCEEE--------EEEETTEEEEEEEC
T ss_pred -EECcchHHHHHHHHhCchhhheEEEEecccCCCCCcchhHHHHHhhcCcchhhhhhh--------hccCCCCccccccc
Confidence 77776 5688899999999999999976422111111 0000000 00 0000000 00000 00000000
Q ss_pred ccccccccccccCCch-hHHHHHHHhc-ch-hhhhHhhhcCcCCCC-CCCcEEEEEeCCCCCCCcchHHHHHhcCCCCeE
Q 022534 189 KADVYRLPYLASSGPG-FALLEAARKV-NF-KDISSRIGAGFSSGS-WDKPVLVAWGISDKYLPQSVAEEFQKGNPNVVK 264 (295)
Q Consensus 189 ~~~~~~~~~~~~~~~~-~~~~~~~~~~-~~-~~~~~~~~~~~~~~~-~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~ 264 (295)
................ .......... .. ....... ....... .++|+|+|+|++|++++++.++.+++.+++ ++
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~P~l~i~G~~D~~~p~~~~~~~~~~~~~-~~ 226 (257)
T 3c6x_A 149 GFTLLRENLYTLCGPEEYELAKMLTRKGSLFQNILAKR-PFFTKEGYGSIKKIYVWTDQDEIFLPEFQLWQIENYKP-DK 226 (257)
T ss_dssp CHHHHHHHTSTTSCHHHHHHHHHHCCCBCCCHHHHHHS-CCCCTTTGGGSCEEEEECTTCSSSCHHHHHHHHHHSCC-SE
T ss_pred cHHHHHHHHhcCCCHHHHHHHHHhcCCCccchhhhccc-cccChhhcCcccEEEEEeCCCcccCHHHHHHHHHHCCC-Ce
Confidence 0000000000000000 0000000000 00 0000000 0111111 269999999999999999999999999997 69
Q ss_pred EEEecCCCCCCCCCChHHHHHHHHHHHHhcC
Q 022534 265 LQMIEGAGHMPQEDWPEKVVDGLRYFFLNYT 295 (295)
Q Consensus 265 ~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~~ 295 (295)
++++|+|||++++|+|++|++.|.+|+..+.
T Consensus 227 ~~~i~~~gH~~~~e~P~~~~~~l~~f~~~~~ 257 (257)
T 3c6x_A 227 VYKVEGGDHKLQLTKTKEIAEILQEVADTYN 257 (257)
T ss_dssp EEECCSCCSCHHHHSHHHHHHHHHHHHHHCC
T ss_pred EEEeCCCCCCcccCCHHHHHHHHHHHHHhcC
Confidence 9999999999999999999999999998753
|
| >3g9x_A Haloalkane dehalogenase; alpha/beta hydrolase, helical CAP domain, catalytic triad (A His272, Glu130), mutant, I135F, haloalkanes; 0.95A {Rhodococcus SP} SCOP: c.69.1.8 PDB: 3fwh_A 3fbw_A 3rlt_A 3rk4_A 1bn6_A 1bn7_A 4fwb_A 1cqw_A 3sk0_A 2v9z_A | Back alignment and structure |
|---|
Probab=100.00 E-value=7.1e-32 Score=231.33 Aligned_cols=270 Identities=24% Similarity=0.370 Sum_probs=176.3
Q ss_pred cccccccceeeEEeCcEEEEEEEcCCCCCCCceEEEEcCCCCCCccchhhHHHhhhCCCeEEEeCCCCCCCCCCCCCCCC
Q 022534 5 IENKGREYGSYIKSGEYRWFVRETGSADSRLGTIVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYD 84 (295)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~vv~lHG~~~~~~~w~~~~~~l~~~~~~via~Dl~G~G~S~~~~~~~~ 84 (295)
++...+....+++.+|.+++|.+.|+++ +|+|||+||++++...|..+++.|++ ||+|+++|+||||.|+.+..
T Consensus 4 ~~~~~~~~~~~~~~~g~~l~~~~~g~~~--~~~vl~lHG~~~~~~~~~~~~~~l~~-~~~v~~~d~~G~G~s~~~~~--- 77 (299)
T 3g9x_A 4 IGTGFPFDPHYVEVLGERMHYVDVGPRD--GTPVLFLHGNPTSSYLWRNIIPHVAP-SHRCIAPDLIGMGKSDKPDL--- 77 (299)
T ss_dssp CCCCCCCCCEEEEETTEEEEEEEESCSS--SCCEEEECCTTCCGGGGTTTHHHHTT-TSCEEEECCTTSTTSCCCCC---
T ss_pred CCCCcccceeeeeeCCeEEEEEecCCCC--CCEEEEECCCCccHHHHHHHHHHHcc-CCEEEeeCCCCCCCCCCCCC---
Confidence 3455677889999999999999998643 46999999999999999999999975 89999999999999997643
Q ss_pred CCCCCHHHHHHHHHHHHHHhCCCCceEEEEecccch-HHHHHHHHhCcCccceeEEEcCCCCCCC--CCchhhh----hh
Q 022534 85 DFDFTENEFHEELDKLLDVLEVKYPFFLVVQGFLVG-SYGLTWALKNPSRISKLAILNSPLTASS--PLPGLFQ----QL 157 (295)
Q Consensus 85 ~~~~~~~~~~~~l~~~~~~l~~~~~~~lv~~G~~~G-~~~~~~a~~~p~~v~~lil~~~p~~~~~--~~~~~~~----~~ 157 (295)
.++.+++++++.++++.++.++ ++++ |||+| .+++.+|.++|++|+++++++++..... ....... .+
T Consensus 78 --~~~~~~~~~~~~~~~~~~~~~~-~~lv--G~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~ 152 (299)
T 3g9x_A 78 --DYFFDDHVRYLDAFIEALGLEE-VVLV--IHDWGSALGFHWAKRNPERVKGIACMEFIRPFPTWDEWPEFARETFQAF 152 (299)
T ss_dssp --CCCHHHHHHHHHHHHHHTTCCS-EEEE--EEHHHHHHHHHHHHHSGGGEEEEEEEEECCCBSSGGGSCGGGHHHHHHH
T ss_pred --cccHHHHHHHHHHHHHHhCCCc-EEEE--EeCccHHHHHHHHHhcchheeEEEEecCCcchhhhhhcchHHHHHHHHH
Confidence 4588999999999999998875 6676 77766 4688899999999999999973322110 0111100 01
Q ss_pred hcccchh-hhhhhHHHHHHHHHhCCCccccccccccccccccccCCchhHHHHHHHhcc-----------hhhhhHhhhc
Q 022534 158 RIPLLGE-FTAQNAIMAERFIEAGSPYVLKLDKADVYRLPYLASSGPGFALLEAARKVN-----------FKDISSRIGA 225 (295)
Q Consensus 158 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~ 225 (295)
..+.... ...........+................+...+.. ............... ..+....+
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-- 229 (299)
T 3g9x_A 153 RTADVGRELIIDQNAFIEGALPKCVVRPLTEVEMDHYREPFLK-PVDREPLWRFPNELPIAGEPANIVALVEAYMNWL-- 229 (299)
T ss_dssp TSSSHHHHHHTTSCHHHHTHHHHTCSSCCCHHHHHHHHGGGSS-GGGGHHHHHHHHHSCBTTBSHHHHHHHHHHHHHH--
T ss_pred cCCCcchhhhccchhhHHHhhhhhhccCCCHHHHHHHHHHhcc-ccccchhhhhhhhhhhccccchhhhhhhhhhhhc--
Confidence 1110000 00000000111111100000000000000000000 000001111111110 00111111
Q ss_pred CcCCCCCCCcEEEEEeCCCCCCCcchHHHHHhcCCCCeEEEEecCCCCCCCCCChHHHHHHHHHHHHh
Q 022534 226 GFSSGSWDKPVLVAWGISDKYLPQSVAEEFQKGNPNVVKLQMIEGAGHMPQEDWPEKVVDGLRYFFLN 293 (295)
Q Consensus 226 ~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 293 (295)
.++++|+|+|+|++|.+++++.++.+.+.+++ +++++++++||++++|+|++|++.|.+|+..
T Consensus 230 ----~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~-~~~~~~~~~gH~~~~e~p~~~~~~i~~~~~~ 292 (299)
T 3g9x_A 230 ----HQSPVPKLLFWGTPGVLIPPAEAARLAESLPN-CKTVDIGPGLHYLQEDNPDLIGSEIARWLPA 292 (299)
T ss_dssp ----HHCCSCEEEEEEEECSSSCHHHHHHHHHHSTT-EEEEEEEEESSCHHHHCHHHHHHHHHHHSGG
T ss_pred ----ccCCCCeEEEecCCCCCCCHHHHHHHHhhCCC-CeEEEeCCCCCcchhcCHHHHHHHHHHHHhh
Confidence 25689999999999999999999999999987 7999999999999999999999999999865
|
| >2qvb_A Haloalkane dehalogenase 3; RV2579, alpha-beta hydrolase protei structural genomics consortium, TBSGC, hydrolase; 1.19A {Mycobacterium tuberculosis} PDB: 2o2i_A 2o2h_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-31 Score=228.82 Aligned_cols=269 Identities=22% Similarity=0.286 Sum_probs=172.0
Q ss_pred cccc-ceeeEEeCcEEEEEEEcCCCCCCCceEEEEcCCCCCCccchhhHHHhhhCCCeEEEeCCCCCCCCCCCCCCCCCC
Q 022534 8 KGRE-YGSYIKSGEYRWFVRETGSADSRLGTIVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDF 86 (295)
Q Consensus 8 ~~~~-~~~~~~~~~~~~~~~~~g~~~~~~~~vv~lHG~~~~~~~w~~~~~~l~~~~~~via~Dl~G~G~S~~~~~~~~~~ 86 (295)
+.|. ...+++.+|.+++|.+.|+ +|+|||+||+++++..|..+++.|++ +|+|+++|+||||.|+.+... ...
T Consensus 4 ~~p~~~~~~~~~~g~~l~~~~~g~----~~~vv~lHG~~~~~~~~~~~~~~l~~-~~~vi~~D~~G~G~S~~~~~~-~~~ 77 (297)
T 2qvb_A 4 VEPYGQPKYLEIAGKRMAYIDEGK----GDAIVFQHGNPTSSYLWRNIMPHLEG-LGRLVACDLIGMGASDKLSPS-GPD 77 (297)
T ss_dssp CSCSSCCEEEEETTEEEEEEEESS----SSEEEEECCTTCCGGGGTTTGGGGTT-SSEEEEECCTTSTTSCCCSSC-STT
T ss_pred cccCCCceEEEECCEEEEEEecCC----CCeEEEECCCCchHHHHHHHHHHHhh-cCeEEEEcCCCCCCCCCCCCc-ccc
Confidence 4566 7789999999999999885 36999999999999999999999986 699999999999999975321 012
Q ss_pred CCCHHHHHHHHHHHHHHhCCCCceEEEEecccch-HHHHHHHHhCcCccceeEEEcCCCCCCC--CCchhhh----hhhc
Q 022534 87 DFTENEFHEELDKLLDVLEVKYPFFLVVQGFLVG-SYGLTWALKNPSRISKLAILNSPLTASS--PLPGLFQ----QLRI 159 (295)
Q Consensus 87 ~~~~~~~~~~l~~~~~~l~~~~~~~lv~~G~~~G-~~~~~~a~~~p~~v~~lil~~~p~~~~~--~~~~~~~----~~~~ 159 (295)
.++.+++++++.+++++++.+++++++ |||+| .+++.+|.++|++|+++|+++++..... ..+.... .+..
T Consensus 78 ~~~~~~~~~~~~~~l~~~~~~~~~~lv--G~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (297)
T 2qvb_A 78 RYSYGEQRDFLFALWDALDLGDHVVLV--LHDWGSALGFDWANQHRDRVQGIAFMEAIVTPMTWADWPPAVRGVFQGFRS 155 (297)
T ss_dssp SSCHHHHHHHHHHHHHHTTCCSCEEEE--EEEHHHHHHHHHHHHSGGGEEEEEEEEECCSCBCGGGSCGGGHHHHHHHTS
T ss_pred CcCHHHHHHHHHHHHHHcCCCCceEEE--EeCchHHHHHHHHHhChHhhheeeEeccccCCccCCCCChHHHHHHHHHhc
Confidence 368899999999999999982357777 67766 5688889999999999999975443211 0111000 0111
Q ss_pred ccchhhhhhhHHHHHHHHHhCCCccccccccccccccccccCCchhHHHHHHHhcc-----------hhhhhHhhhcCcC
Q 022534 160 PLLGEFTAQNAIMAERFIEAGSPYVLKLDKADVYRLPYLASSGPGFALLEAARKVN-----------FKDISSRIGAGFS 228 (295)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~ 228 (295)
+...............+................+...+.................. ..+....+
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l----- 230 (297)
T 2qvb_A 156 PQGEPMALEHNIFVERVLPGAILRQLSDEEMNHYRRPFVNGGEDRRPTLSWPRNLPIDGEPAEVVALVNEYRSWL----- 230 (297)
T ss_dssp TTHHHHHHTTCHHHHTHHHHTCSSCCCHHHHHHHHGGGCSSSGGGHHHHHHHHHSCBTTBSHHHHHHHHHHHHHH-----
T ss_pred ccchhhhccccHHHHHHHhccccccCCHHHHHHHHHHhcCcccchhhHHHHHHhccccCCchhhHHHHHHHHhhc-----
Confidence 10000000000011111111000000000000000000000000011111111110 00111111
Q ss_pred CCCCCCcEEEEEeCCCCCCCcchHHHHHhcCCCCeEEEEecCCCCCCCCCChHHHHHHHHHHHHh
Q 022534 229 SGSWDKPVLVAWGISDKYLPQSVAEEFQKGNPNVVKLQMIEGAGHMPQEDWPEKVVDGLRYFFLN 293 (295)
Q Consensus 229 ~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 293 (295)
+++++|+|+|+|++|.+++++.++.+.+.+++ +++++ ++||++++|+|+++++.|.+||++
T Consensus 231 -~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~--~~~~~-~~gH~~~~~~p~~~~~~i~~fl~~ 291 (297)
T 2qvb_A 231 -EETDMPKLFINAEPGAIITGRIRDYVRSWPNQ--TEITV-PGVHFVQEDSPEEIGAAIAQFVRR 291 (297)
T ss_dssp -HHCCSCEEEEEEEECSSSCHHHHHHHHTSSSE--EEEEE-EESSCGGGTCHHHHHHHHHHHHHH
T ss_pred -ccccccEEEEecCCCCcCCHHHHHHHHHHcCC--eEEEe-cCccchhhhCHHHHHHHHHHHHHH
Confidence 15689999999999999999999999998885 89999 999999999999999999999976
|
| >1xkl_A SABP2, salicylic acid-binding protein 2; alpha-beta protein, structural genomics, protein structure initiative, PSI; HET: STH; 2.00A {Nicotiana tabacum} SCOP: c.69.1.20 PDB: 1y7i_A* 1y7h_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-31 Score=229.71 Aligned_cols=246 Identities=19% Similarity=0.147 Sum_probs=149.7
Q ss_pred CceEEEEcCCCCCCccchhhHHHhhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCceEEEE
Q 022534 35 LGTIVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEELDKLLDVLEVKYPFFLVV 114 (295)
Q Consensus 35 ~~~vv~lHG~~~~~~~w~~~~~~l~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~~lv~ 114 (295)
+++|||+||+++++..|..+++.|++.||+||++|+||||+|+.+.. ..|+++++++++.+++++++..++++||
T Consensus 4 ~~~vvllHG~~~~~~~w~~~~~~L~~~g~rVia~Dl~G~G~S~~~~~----~~~~~~~~a~dl~~~l~~l~~~~~~~lv- 78 (273)
T 1xkl_A 4 GKHFVLVHGACHGGWSWYKLKPLLEAAGHKVTALDLAASGTDLRKIE----ELRTLYDYTLPLMELMESLSADEKVILV- 78 (273)
T ss_dssp CCEEEEECCTTCCGGGGTTHHHHHHHTTCEEEECCCTTSTTCCCCGG----GCCSHHHHHHHHHHHHHTSCSSSCEEEE-
T ss_pred CCeEEEECCCCCCcchHHHHHHHHHhCCCEEEEecCCCCCCCccCcc----cccCHHHHHHHHHHHHHHhccCCCEEEE-
Confidence 36899999999999999999999986789999999999999986432 1368899999999999999732346777
Q ss_pred ecccchH-HHHHHHHhCcCccceeEEEcCCCCCCCCCc-hhhhhhhcccch-hhhhhhHHHHHHHHHhCCCcc--cc-cc
Q 022534 115 QGFLVGS-YGLTWALKNPSRISKLAILNSPLTASSPLP-GLFQQLRIPLLG-EFTAQNAIMAERFIEAGSPYV--LK-LD 188 (295)
Q Consensus 115 ~G~~~G~-~~~~~a~~~p~~v~~lil~~~p~~~~~~~~-~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~--~~-~~ 188 (295)
|||+|+ +++.+|.++|++|+++|++++......... ............ ..... .+.....+.. .. ..
T Consensus 79 -GhSmGG~va~~~a~~~P~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~ 151 (273)
T 1xkl_A 79 -GHSLGGMNLGLAMEKYPQKIYAAVFLAAFMPDSVHNSSFVLEQYNERTPAENWLDT------QFLPYGSPEEPLTSMFF 151 (273)
T ss_dssp -EETTHHHHHHHHHHHCGGGEEEEEEESCCCCCSSSCTTHHHHHHHHTSCTTTTTTC------EEEECSCTTSCCEEEEC
T ss_pred -ecCHHHHHHHHHHHhChHhheEEEEEeccCCCCCCcHHHHHHHhhccCChhhHHHH------HHhhccCCCCCcccccc
Confidence 777765 678889999999999999975321111111 000000000000 00000 0000000000 00 00
Q ss_pred ccccccccccccCCch-hHHHHHHHhc-c-hhhhhHhhhcCcCC-CCCCCcEEEEEeCCCCCCCcchHHHHHhcCCCCeE
Q 022534 189 KADVYRLPYLASSGPG-FALLEAARKV-N-FKDISSRIGAGFSS-GSWDKPVLVAWGISDKYLPQSVAEEFQKGNPNVVK 264 (295)
Q Consensus 189 ~~~~~~~~~~~~~~~~-~~~~~~~~~~-~-~~~~~~~~~~~~~~-~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~ 264 (295)
........+....... ..+....... . ....... ...+.. ...++|+|+|+|++|.+++++.++.+.+.+++ ++
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~P~l~i~G~~D~~~p~~~~~~~~~~~p~-~~ 229 (273)
T 1xkl_A 152 GPKFLAHKLYQLCSPEDLALASSLVRPSSLFMEDLSK-AKYFTDERFGSVKRVYIVCTEDKGIPEEFQRWQIDNIGV-TE 229 (273)
T ss_dssp CHHHHHHHTSTTSCHHHHHHHHHHCCCBCCCHHHHHH-CCCCCTTTGGGSCEEEEEETTCTTTTHHHHHHHHHHHCC-SE
T ss_pred CHHHHHHHhhccCCHHHHHHHHHhcCCCchhhhhhhc-ccccchhhhCCCCeEEEEeCCccCCCHHHHHHHHHhCCC-Ce
Confidence 0000000000000000 0000000000 0 0000000 001110 12369999999999999999999999988987 69
Q ss_pred EEEecCCCCCCCCCChHHHHHHHHHHHHhc
Q 022534 265 LQMIEGAGHMPQEDWPEKVVDGLRYFFLNY 294 (295)
Q Consensus 265 ~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~ 294 (295)
++++|+|||++++|+|++|++.|.+|+...
T Consensus 230 ~~~i~~aGH~~~~e~P~~~~~~i~~fl~~~ 259 (273)
T 1xkl_A 230 AIEIKGADHMAMLCEPQKLCASLLEIAHKY 259 (273)
T ss_dssp EEEETTCCSCHHHHSHHHHHHHHHHHHHHC
T ss_pred EEEeCCCCCCchhcCHHHHHHHHHHHHHHh
Confidence 999999999999999999999999999763
|
| >2wfl_A Polyneuridine-aldehyde esterase; alkaloid metabolism, monoterpenoid indole alkaloids, PNAE, hydrolase, serine esterase; HET: CME; 2.10A {Rauvolfia serpentina} PDB: 2wfm_A 3gzj_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-31 Score=228.15 Aligned_cols=240 Identities=15% Similarity=0.145 Sum_probs=148.2
Q ss_pred CceEEEEcCCCCCCccchhhHHHhhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCceEEEE
Q 022534 35 LGTIVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEELDKLLDVLEVKYPFFLVV 114 (295)
Q Consensus 35 ~~~vv~lHG~~~~~~~w~~~~~~l~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~~lv~ 114 (295)
+++||||||+++++..|..+++.|+++||+||++|+||||+|+++.. ..|+++++++|+.+++++++..++++||
T Consensus 10 g~~vvllHG~~~~~~~w~~~~~~L~~~g~~via~Dl~G~G~S~~~~~----~~~~~~~~a~dl~~~l~~l~~~~~~~lv- 84 (264)
T 2wfl_A 10 QKHFVLVHGGCLGAWIWYKLKPLLESAGHKVTAVDLSAAGINPRRLD----EIHTFRDYSEPLMEVMASIPPDEKVVLL- 84 (264)
T ss_dssp CCEEEEECCTTCCGGGGTTHHHHHHHTTCEEEEECCTTSTTCSCCGG----GCCSHHHHHHHHHHHHHHSCTTCCEEEE-
T ss_pred CCeEEEECCCccccchHHHHHHHHHhCCCEEEEeecCCCCCCCCCcc----cccCHHHHHHHHHHHHHHhCCCCCeEEE-
Confidence 57999999999999999999999976689999999999999986431 1368899999999999999632346777
Q ss_pred ecccchH-HHHHHHHhCcCccceeEEEcCCCCCCCCCc-hhhhhhhcccchhhhhhhHHHHHHHHHh-----CCCcc--c
Q 022534 115 QGFLVGS-YGLTWALKNPSRISKLAILNSPLTASSPLP-GLFQQLRIPLLGEFTAQNAIMAERFIEA-----GSPYV--L 185 (295)
Q Consensus 115 ~G~~~G~-~~~~~a~~~p~~v~~lil~~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~--~ 185 (295)
|||+|+ +++.+|.++|++|+++|+++++........ ............ ..+... ..+.. .
T Consensus 85 -GhSmGG~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~ 153 (264)
T 2wfl_A 85 -GHSFGGMSLGLAMETYPEKISVAVFMSAMMPDPNHSLTYPFEKYNEKCPA----------DMMLDSQFSTYGNPENPGM 153 (264)
T ss_dssp -EETTHHHHHHHHHHHCGGGEEEEEEESSCCCCTTSCTTHHHHHHHHHSCT----------TTTTTCEEEEESCTTSCEE
T ss_pred -EeChHHHHHHHHHHhChhhhceeEEEeeccCCCCcchhhHHHHhhhcCcc----------hhhhhhhhhhccCCCCCcc
Confidence 777764 678889999999999999975321111111 000000000000 000000 00000 0
Q ss_pred c-ccccccccccccccCCch-hHHHHHHHhcchhhhhHhhh--cCcCC-CCCCCcEEEEEeCCCCCCCcchHHHHHhcCC
Q 022534 186 K-LDKADVYRLPYLASSGPG-FALLEAARKVNFKDISSRIG--AGFSS-GSWDKPVLVAWGISDKYLPQSVAEEFQKGNP 260 (295)
Q Consensus 186 ~-~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~--~~~~~-~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~~ 260 (295)
. .................. ..+........ ......+. ..+.. ...++|+|+|+|++|.+++++.++.+++.++
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~p 232 (264)
T 2wfl_A 154 SMILGPQFMALKMFQNCSVEDLELAKMLTRPG-SLFFQDLAKAKKFSTERYGSVKRAYIFCNEDKSFPVEFQKWFVESVG 232 (264)
T ss_dssp EEECCHHHHHHHTSTTSCHHHHHHHHHHCCCE-ECCHHHHTTSCCCCTTTGGGSCEEEEEETTCSSSCHHHHHHHHHHHC
T ss_pred hhhhhHHHHHHHHhcCCCHHHHHHHHhccCCC-cccccccccccccChHHhCCCCeEEEEeCCcCCCCHHHHHHHHHhCC
Confidence 0 000000000000000000 00000000000 00000000 01110 1136999999999999999999999998898
Q ss_pred CCeEEEEecCCCCCCCCCChHHHHHHHHHHHH
Q 022534 261 NVVKLQMIEGAGHMPQEDWPEKVVDGLRYFFL 292 (295)
Q Consensus 261 ~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~ 292 (295)
+ ++++++++|||++++|+|++|++.|.+|+.
T Consensus 233 ~-~~~~~i~~~gH~~~~e~P~~~~~~l~~f~~ 263 (264)
T 2wfl_A 233 A-DKVKEIKEADHMGMLSQPREVCKCLLDISD 263 (264)
T ss_dssp C-SEEEEETTCCSCHHHHSHHHHHHHHHHHHC
T ss_pred C-ceEEEeCCCCCchhhcCHHHHHHHHHHHhh
Confidence 7 699999999999999999999999999975
|
| >3oos_A Alpha/beta hydrolase family protein; APC67239.0, protein structure initiative, PSI-2, structural midwest center for structural genomics, MCSG; HET: MSE PG4; 1.65A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.9e-32 Score=228.20 Aligned_cols=257 Identities=15% Similarity=0.176 Sum_probs=167.6
Q ss_pred ceeeEEeCcEEEEEEEcCCCCCCCceEEEEcCCCCCCccchhhHHHhhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCCHH
Q 022534 12 YGSYIKSGEYRWFVRETGSADSRLGTIVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTEN 91 (295)
Q Consensus 12 ~~~~~~~~~~~~~~~~~g~~~~~~~~vv~lHG~~~~~~~w~~~~~~l~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~ 91 (295)
...+++++|.+++|...|+ .|+|||+||+++++..|..+++.|++ +|+|+++|+||||.|+.+.. ...++.+
T Consensus 4 ~~~~~~~~~~~~~y~~~g~----~~~vv~~HG~~~~~~~~~~~~~~L~~-~~~vi~~d~~G~G~s~~~~~---~~~~~~~ 75 (278)
T 3oos_A 4 TTNIIKTPRGKFEYFLKGE----GPPLCVTHLYSEYNDNGNTFANPFTD-HYSVYLVNLKGCGNSDSAKN---DSEYSMT 75 (278)
T ss_dssp EEEEEEETTEEEEEEEECS----SSEEEECCSSEECCTTCCTTTGGGGG-TSEEEEECCTTSTTSCCCSS---GGGGSHH
T ss_pred ccCcEecCCceEEEEecCC----CCeEEEEcCCCcchHHHHHHHHHhhc-CceEEEEcCCCCCCCCCCCC---cccCcHH
Confidence 3578999999999999884 35899999999999999999999987 89999999999999997642 2356889
Q ss_pred HHHHHHHHHHHHhCCCCceEEEEecccch-HHHHHHHHhCcCccceeEEEcCCCCCC-CCCch--------hhhhhh---
Q 022534 92 EFHEELDKLLDVLEVKYPFFLVVQGFLVG-SYGLTWALKNPSRISKLAILNSPLTAS-SPLPG--------LFQQLR--- 158 (295)
Q Consensus 92 ~~~~~l~~~~~~l~~~~~~~lv~~G~~~G-~~~~~~a~~~p~~v~~lil~~~p~~~~-~~~~~--------~~~~~~--- 158 (295)
++++++.+++++++.++ ++++ |||+| .+++.+|.++|++|+++++++++.... ...+. ......
T Consensus 76 ~~~~~~~~~~~~l~~~~-~~lv--G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (278)
T 3oos_A 76 ETIKDLEAIREALYINK-WGFA--GHSAGGMLALVYATEAQESLTKIIVGGAAASKEYASHKDSIYCSKNVKFNRIVSIM 152 (278)
T ss_dssp HHHHHHHHHHHHTTCSC-EEEE--EETHHHHHHHHHHHHHGGGEEEEEEESCCSBGGGGGSTTSTTSTTSTTHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCe-EEEE--eecccHHHHHHHHHhCchhhCeEEEecCccccccccccchhhhhhchhHHHHHHHH
Confidence 99999999999998874 6676 67766 568888999999999999997654310 00000 000000
Q ss_pred cccchhh-hhh-hHHHHHHHHHhCCCccccccc-cccccccccccCCchhHHHHHHH--hcchhhhhHhhhcCcCCCCCC
Q 022534 159 IPLLGEF-TAQ-NAIMAERFIEAGSPYVLKLDK-ADVYRLPYLASSGPGFALLEAAR--KVNFKDISSRIGAGFSSGSWD 233 (295)
Q Consensus 159 ~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 233 (295)
..+.... ... ...+...+.... ...... ......+.. ............ .....+....+ .+++
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~------~~i~ 221 (278)
T 3oos_A 153 NALNDDSTVQEERKALSREWALMS---FYSEEKLEEALKLPNS--GKTVGNRLNYFRQVEYKDYDVRQKL------KFVK 221 (278)
T ss_dssp HHHTCTTSCHHHHHHHHHHHHHHH---CSCHHHHHHHTTSCCC--CEECHHHHHHHHHTTGGGCBCHHHH------TTCC
T ss_pred HhhcccccCchHHHHHHHHHhhcc---cCCcHHHHHHhhcccc--chhHHHHHHHhhhcccccccHHHHH------hCCC
Confidence 0000000 000 000000110000 000000 000000000 000001111111 00000111111 2678
Q ss_pred CcEEEEEeCCCCCCCcchHHHHHhcCCCCeEEEEecCCCCCCCCCChHHHHHHHHHHH
Q 022534 234 KPVLVAWGISDKYLPQSVAEEFQKGNPNVVKLQMIEGAGHMPQEDWPEKVVDGLRYFF 291 (295)
Q Consensus 234 ~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl 291 (295)
+|+|+|+|++|++++++.+..+.+.+++ +++++++++||++++|+|+++++.|.+||
T Consensus 222 ~P~l~i~g~~D~~~~~~~~~~~~~~~~~-~~~~~~~~~gH~~~~~~p~~~~~~i~~fl 278 (278)
T 3oos_A 222 IPSFIYCGKHDVQCPYIFSCEIANLIPN-ATLTKFEESNHNPFVEEIDKFNQFVNDTL 278 (278)
T ss_dssp SCEEEEEETTCSSSCHHHHHHHHHHSTT-EEEEEETTCSSCHHHHSHHHHHHHHHHTC
T ss_pred CCEEEEEeccCCCCCHHHHHHHHhhCCC-cEEEEcCCcCCCcccccHHHHHHHHHhhC
Confidence 9999999999999999999999999987 79999999999999999999999999986
|
| >1wom_A RSBQ, sigma factor SIGB regulation protein RSBQ; alpha/beta hydrolase, signaling protein; 2.50A {Bacillus subtilis} PDB: 1wpr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.9e-33 Score=235.49 Aligned_cols=248 Identities=19% Similarity=0.280 Sum_probs=154.6
Q ss_pred EEEcCCCCCCCceEEEEcCCCCCCccchhhHHHhhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh
Q 022534 25 VRETGSADSRLGTIVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEELDKLLDVL 104 (295)
Q Consensus 25 ~~~~g~~~~~~~~vv~lHG~~~~~~~w~~~~~~l~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~l~~~~~~l 104 (295)
|...|++ +|+|||+||+++++..|..+++.|++ +|+|+++|+||||.|+.+.... ...++++++++|+.++++++
T Consensus 13 ~~~~G~g---~~~vvllHG~~~~~~~w~~~~~~L~~-~~~vi~~Dl~G~G~S~~~~~~~-~~~~~~~~~a~dl~~~l~~l 87 (271)
T 1wom_A 13 VKVKGSG---KASIMFAPGFGCDQSVWNAVAPAFEE-DHRVILFDYVGSGHSDLRAYDL-NRYQTLDGYAQDVLDVCEAL 87 (271)
T ss_dssp CEEEECC---SSEEEEECCTTCCGGGGTTTGGGGTT-TSEEEECCCSCCSSSCCTTCCT-TGGGSHHHHHHHHHHHHHHT
T ss_pred eEeecCC---CCcEEEEcCCCCchhhHHHHHHHHHh-cCeEEEECCCCCCCCCCCcccc-cccccHHHHHHHHHHHHHHc
Confidence 3445643 36899999999999999999999986 7999999999999998653111 11358899999999999999
Q ss_pred CCCCceEEEEecccch-HHHHHHHHhCcCccceeEEEcCCCCCCCCC---chhhhhhhc-ccchhhhhhhHHHHHHHHHh
Q 022534 105 EVKYPFFLVVQGFLVG-SYGLTWALKNPSRISKLAILNSPLTASSPL---PGLFQQLRI-PLLGEFTAQNAIMAERFIEA 179 (295)
Q Consensus 105 ~~~~~~~lv~~G~~~G-~~~~~~a~~~p~~v~~lil~~~p~~~~~~~---~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 179 (295)
++++ ++++ |||+| .+++.+|.++|++|+++|++++........ ...+..... .+..............+...
T Consensus 88 ~~~~-~~lv--GhS~GG~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (271)
T 1wom_A 88 DLKE-TVFV--GHSVGALIGMLASIRRPELFSHLVMVGPSPCYLNDPPEYYGGFEEEQLLGLLEMMEKNYIGWATVFAAT 164 (271)
T ss_dssp TCSC-EEEE--EETHHHHHHHHHHHHCGGGEEEEEEESCCSCCBEETTTEECSBCHHHHHHHHHHHHHCHHHHHHHHHHH
T ss_pred CCCC-eEEE--EeCHHHHHHHHHHHhCHHhhcceEEEcCCCcCCCCCchhccCCCHHHHHHHHHHHhhhHHHHHHHHHHH
Confidence 9875 6676 77776 568889999999999999986532111000 000000000 00000000000000000000
Q ss_pred --CCCccccccccccccccccccCCchh--HHHHHHHhcchhhhhHhhhcCcCCCCCCCcEEEEEeCCCCCCCcchHHHH
Q 022534 180 --GSPYVLKLDKADVYRLPYLASSGPGF--ALLEAARKVNFKDISSRIGAGFSSGSWDKPVLVAWGISDKYLPQSVAEEF 255 (295)
Q Consensus 180 --~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~ 255 (295)
..+ ........+...+ ....+.. .+....... +....+ .++++|+|+|+|++|.+++++.++.+
T Consensus 165 ~~~~~--~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~---~~~~~l------~~i~~P~lvi~G~~D~~~~~~~~~~~ 232 (271)
T 1wom_A 165 VLNQP--DRPEIKEELESRF-CSTDPVIARQFAKAAFFS---DHREDL------SKVTVPSLILQCADDIIAPATVGKYM 232 (271)
T ss_dssp HHCCT--TCHHHHHHHHHHH-HHSCHHHHHHHHHHHHSC---CCHHHH------TTCCSCEEEEEEETCSSSCHHHHHHH
T ss_pred HhcCC--CchHHHHHHHHHH-hcCCcHHHHHHHHHHhCc---chHHhc------cccCCCEEEEEcCCCCcCCHHHHHHH
Confidence 000 0000000000000 0001100 000000000 111111 36799999999999999999989999
Q ss_pred HhcCCCCeEEEEecCCCCCCCCCChHHHHHHHHHHHHh
Q 022534 256 QKGNPNVVKLQMIEGAGHMPQEDWPEKVVDGLRYFFLN 293 (295)
Q Consensus 256 ~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 293 (295)
++.+++ +++++++++||++++|+|++|++.|.+|+.+
T Consensus 233 ~~~~~~-~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 269 (271)
T 1wom_A 233 HQHLPY-SSLKQMEARGHCPHMSHPDETIQLIGDYLKA 269 (271)
T ss_dssp HHHSSS-EEEEEEEEESSCHHHHCHHHHHHHHHHHHHH
T ss_pred HHHCCC-CEEEEeCCCCcCccccCHHHHHHHHHHHHHh
Confidence 999987 7999999999999999999999999999975
|
| >3u1t_A DMMA haloalkane dehalogenase; alpha/beta-hydrolase, hydrolase; 2.20A {Unidentified} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-31 Score=229.07 Aligned_cols=266 Identities=22% Similarity=0.346 Sum_probs=173.3
Q ss_pred cccceeeEEeCcEEEEEEEcCCCCCCCceEEEEcCCCCCCccchhhHHHhhhCCCeEEEeCCCCCCCCCCCCCCCCCCCC
Q 022534 9 GREYGSYIKSGEYRWFVRETGSADSRLGTIVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDF 88 (295)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~vv~lHG~~~~~~~w~~~~~~l~~~~~~via~Dl~G~G~S~~~~~~~~~~~~ 88 (295)
.+....+++++|.+++|.+.|+ .|+|||+||++++...|..+++.|.+.||+|+++|+||||.|+.+.. .+
T Consensus 7 ~~~~~~~~~~~g~~l~~~~~g~----~~~vv~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~S~~~~~-----~~ 77 (309)
T 3u1t_A 7 FPFAKRTVEVEGATIAYVDEGS----GQPVLFLHGNPTSSYLWRNIIPYVVAAGYRAVAPDLIGMGDSAKPDI-----EY 77 (309)
T ss_dssp CCCCCEEEEETTEEEEEEEEEC----SSEEEEECCTTCCGGGGTTTHHHHHHTTCEEEEECCTTSTTSCCCSS-----CC
T ss_pred ccccceEEEECCeEEEEEEcCC----CCEEEEECCCcchhhhHHHHHHHHHhCCCEEEEEccCCCCCCCCCCc-----cc
Confidence 3456789999999999999886 35999999999999999999999555699999999999999997543 45
Q ss_pred CHHHHHHHHHHHHHHhCCCCceEEEEecccch-HHHHHHHHhCcCccceeEEEcCCCCCCC---CCchhhhh-------h
Q 022534 89 TENEFHEELDKLLDVLEVKYPFFLVVQGFLVG-SYGLTWALKNPSRISKLAILNSPLTASS---PLPGLFQQ-------L 157 (295)
Q Consensus 89 ~~~~~~~~l~~~~~~l~~~~~~~lv~~G~~~G-~~~~~~a~~~p~~v~~lil~~~p~~~~~---~~~~~~~~-------~ 157 (295)
+.+++++++.+++++++.++ ++++ |||+| .+++.+|.++|++|+++|+++++..... .+...... +
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~-~~lv--GhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (309)
T 3u1t_A 78 RLQDHVAYMDGFIDALGLDD-MVLV--IHDWGSVIGMRHARLNPDRVAAVAFMEALVPPALPMPSYEAMGPQLGPLFRDL 154 (309)
T ss_dssp CHHHHHHHHHHHHHHHTCCS-EEEE--EEEHHHHHHHHHHHHCTTTEEEEEEEEESCTTTCSBSCSGGGHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHcCCCc-eEEE--EeCcHHHHHHHHHHhChHhheEEEEeccCCCCccccccccccchhhhHHHHHH
Confidence 88999999999999998875 6676 67766 4678889999999999999976543321 11111000 0
Q ss_pred hcccchh-hhhhhHHHHHHHHHhC-CCccccccccccccccccccCCchhHHHHHHHhcch-----------hhhhHhhh
Q 022534 158 RIPLLGE-FTAQNAIMAERFIEAG-SPYVLKLDKADVYRLPYLASSGPGFALLEAARKVNF-----------KDISSRIG 224 (295)
Q Consensus 158 ~~~~~~~-~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~ 224 (295)
..+.... ...........+.... ....+.......+...+.. ................ .+....+
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l- 232 (309)
T 3u1t_A 155 RTADVGEKMVLDGNFFVETILPEMGVVRSLSEAEMAAYRAPFPT-RQSRLPTLQWPREVPIGGEPAFAEAEVLKNGEWL- 232 (309)
T ss_dssp TSTTHHHHHHTTTCHHHHTHHHHTSCSSCCCHHHHHHHHTTCCS-TGGGHHHHHHHHHSCBTTBSHHHHHHHHHHHHHH-
T ss_pred hccchhhhhccccceehhhhcccccccccCCHHHHHHHHHhcCC-ccccchHHHHHHHhccccccchhhhhhhhhhhhc-
Confidence 0000000 0000000011111110 0000000000000000000 0000111111111100 0111111
Q ss_pred cCcCCCCCCCcEEEEEeCCCCCCCcchHHHHHhcCCCCeEEEEecCCCCCCCCCChHHHHHHHHHHHHhc
Q 022534 225 AGFSSGSWDKPVLVAWGISDKYLPQSVAEEFQKGNPNVVKLQMIEGAGHMPQEDWPEKVVDGLRYFFLNY 294 (295)
Q Consensus 225 ~~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~ 294 (295)
.++++|+|+|+|++|.+++.+.+..+.+.+++ .++++++++||++++|+|+++++.|.+||++.
T Consensus 233 -----~~i~~P~l~i~G~~D~~~~~~~~~~~~~~~~~-~~~~~~~~~gH~~~~~~p~~~~~~i~~fl~~~ 296 (309)
T 3u1t_A 233 -----MASPIPKLLFHAEPGALAPKPVVDYLSENVPN-LEVRFVGAGTHFLQEDHPHLIGQGIADWLRRN 296 (309)
T ss_dssp -----HHCCSCEEEEEEEECSSSCHHHHHHHHHHSTT-EEEEEEEEESSCHHHHCHHHHHHHHHHHHHHH
T ss_pred -----ccCCCCEEEEecCCCCCCCHHHHHHHHhhCCC-CEEEEecCCcccchhhCHHHHHHHHHHHHHhc
Confidence 15689999999999999999999999999987 68888899999999999999999999999863
|
| >1mtz_A Proline iminopeptidase; alpha-beta hydrolase, CAP domain, caged active site, prolyl peptidase; 1.80A {Thermoplasma acidophilum} SCOP: c.69.1.7 PDB: 1mt3_A 1mu0_A* 1xrr_A 1xrq_A 1xro_A 1xrn_A 1xrm_A 1xrp_A 1xrl_A* 1xqw_A* 1xqx_A* 1xqy_A 1xqv_A | Back alignment and structure |
|---|
Probab=99.98 E-value=2.8e-31 Score=228.28 Aligned_cols=267 Identities=19% Similarity=0.205 Sum_probs=161.5
Q ss_pred eeeEEeCcEEEEEEEcCCCCCCCceEEEEcCCCCCCccchhhHHHhhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCCHHH
Q 022534 13 GSYIKSGEYRWFVRETGSADSRLGTIVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTENE 92 (295)
Q Consensus 13 ~~~~~~~~~~~~~~~~g~~~~~~~~vv~lHG~~~~~~~w~~~~~~l~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~ 92 (295)
..+++++|.+++|...|+++ .+++|||+||+++++..|...+..+.+.||+|+++|+||||+|+++. . ..|++++
T Consensus 7 ~~~~~~~g~~l~~~~~g~~~-~~~~vvllHG~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~-~---~~~~~~~ 81 (293)
T 1mtz_A 7 ENYAKVNGIYIYYKLCKAPE-EKAKLMTMHGGPGMSHDYLLSLRDMTKEGITVLFYDQFGCGRSEEPD-Q---SKFTIDY 81 (293)
T ss_dssp EEEEEETTEEEEEEEECCSS-CSEEEEEECCTTTCCSGGGGGGGGGGGGTEEEEEECCTTSTTSCCCC-G---GGCSHHH
T ss_pred ceEEEECCEEEEEEEECCCC-CCCeEEEEeCCCCcchhHHHHHHHHHhcCcEEEEecCCCCccCCCCC-C---CcccHHH
Confidence 56788999999999998642 23799999998877766655566666668999999999999999754 1 2368899
Q ss_pred HHHHHHHHHHHh-CCCCceEEEEecccch-HHHHHHHHhCcCccceeEEEcCCCCCCCCCchhhhhhhcccchhhhhhhH
Q 022534 93 FHEELDKLLDVL-EVKYPFFLVVQGFLVG-SYGLTWALKNPSRISKLAILNSPLTASSPLPGLFQQLRIPLLGEFTAQNA 170 (295)
Q Consensus 93 ~~~~l~~~~~~l-~~~~~~~lv~~G~~~G-~~~~~~a~~~p~~v~~lil~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (295)
+++|+.++++++ ++++ ++|+ |||+| .+++.+|.++|++|+++|+++++.... ........... .+.... . .
T Consensus 82 ~~~dl~~~~~~l~~~~~-~~lv--GhS~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~-~~~~~~~~~~~-~~~~~~-~-~ 154 (293)
T 1mtz_A 82 GVEEAEALRSKLFGNEK-VFLM--GSSYGGALALAYAVKYQDHLKGLIVSGGLSSVP-LTVKEMNRLID-ELPAKY-R-D 154 (293)
T ss_dssp HHHHHHHHHHHHHTTCC-EEEE--EETHHHHHHHHHHHHHGGGEEEEEEESCCSBHH-HHHHHHHHHHH-TSCHHH-H-H
T ss_pred HHHHHHHHHHHhcCCCc-EEEE--EecHHHHHHHHHHHhCchhhheEEecCCccChH-HHHHHHHHHHH-hcCHHH-H-H
Confidence 999999999999 9874 6777 67776 568889999999999999986543210 00000000000 000000 0 0
Q ss_pred HHHHHHHHhCC--Ccccccccccccccccc-ccCCchh--HHHHHHH------h-cc---hh--hhhHhhhcCcCCCCCC
Q 022534 171 IMAERFIEAGS--PYVLKLDKADVYRLPYL-ASSGPGF--ALLEAAR------K-VN---FK--DISSRIGAGFSSGSWD 233 (295)
Q Consensus 171 ~~~~~~~~~~~--~~~~~~~~~~~~~~~~~-~~~~~~~--~~~~~~~------~-~~---~~--~~~~~~~~~~~~~~~~ 233 (295)
.+ ........ ...........+..... ....+.. ....... . .. +. .........-...+++
T Consensus 155 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~ 233 (293)
T 1mtz_A 155 AI-KKYGSSGSYENPEYQEAVNYFYHQHLLRSEDWPPEVLKSLEYAERRNVYRIMNGPNEFTITGTIKDWDITDKISAIK 233 (293)
T ss_dssp HH-HHHHHHTCTTCHHHHHHHHHHHHHHTSCSSCCCHHHHHHHHHHHHSSHHHHHTCSBTTBCCSTTTTCBCTTTGGGCC
T ss_pred HH-HHhhccCCcChHHHHHHHHHHHHhhcccccCchHHHHHhHhhhccchhhhhccCcceecccccccCCChhhhhccCC
Confidence 00 00000000 00000000000000000 0000000 0000000 0 00 00 0000000000113578
Q ss_pred CcEEEEEeCCCCCCCcchHHHHHhcCCCCeEEEEecCCCCCCCCCChHHHHHHHHHHHHhc
Q 022534 234 KPVLVAWGISDKYLPQSVAEEFQKGNPNVVKLQMIEGAGHMPQEDWPEKVVDGLRYFFLNY 294 (295)
Q Consensus 234 ~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~ 294 (295)
+|+|+|+|++| .++++.++.+.+.+++ +++++++++||++++|+|++|++.|.+|+.+.
T Consensus 234 ~P~lii~G~~D-~~~~~~~~~~~~~~~~-~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~~ 292 (293)
T 1mtz_A 234 IPTLITVGEYD-EVTPNVARVIHEKIAG-SELHVFRDCSHLTMWEDREGYNKLLSDFILKH 292 (293)
T ss_dssp SCEEEEEETTC-SSCHHHHHHHHHHSTT-CEEEEETTCCSCHHHHSHHHHHHHHHHHHHTC
T ss_pred CCEEEEeeCCC-CCCHHHHHHHHHhCCC-ceEEEeCCCCCCccccCHHHHHHHHHHHHHhc
Confidence 99999999999 5677788899999987 79999999999999999999999999999763
|
| >1mj5_A 1,3,4,6-tetrachloro-1,4-cyclohexadiene hydrolase; LINB, haloalkane dehalogenase, 1, 3, 4, 4-cyclohexadiene dehalogenase; 0.95A {Sphingomonas paucimobilis} SCOP: c.69.1.8 PDB: 1cv2_A 1d07_A 2bfn_A 1g42_A* 1g4h_A* 1g5f_A* 1iz7_A 1iz8_A* 1k5p_A 1k63_A 1k6e_A | Back alignment and structure |
|---|
Probab=99.98 E-value=3.9e-31 Score=227.46 Aligned_cols=268 Identities=21% Similarity=0.270 Sum_probs=170.0
Q ss_pred ccc-ceeeEEeCcEEEEEEEcCCCCCCCceEEEEcCCCCCCccchhhHHHhhhCCCeEEEeCCCCCCCCCCCCCCCCCCC
Q 022534 9 GRE-YGSYIKSGEYRWFVRETGSADSRLGTIVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFD 87 (295)
Q Consensus 9 ~~~-~~~~~~~~~~~~~~~~~g~~~~~~~~vv~lHG~~~~~~~w~~~~~~l~~~~~~via~Dl~G~G~S~~~~~~~~~~~ 87 (295)
.|. ...+++.+|.+++|...|+ +|+|||+||++++...|..+++.|++ +|+|+++|+||||.|+.+... ....
T Consensus 6 ~p~~~~~~~~~~g~~l~~~~~g~----~~~vv~lHG~~~~~~~~~~~~~~L~~-~~~vi~~D~~G~G~S~~~~~~-~~~~ 79 (302)
T 1mj5_A 6 KPFGEKKFIEIKGRRMAYIDEGT----GDPILFQHGNPTSSYLWRNIMPHCAG-LGRLIACDLIGMGDSDKLDPS-GPER 79 (302)
T ss_dssp SCSSCCEEEEETTEEEEEEEESC----SSEEEEECCTTCCGGGGTTTGGGGTT-SSEEEEECCTTSTTSCCCSSC-STTS
T ss_pred ccCCcceEEEECCEEEEEEEcCC----CCEEEEECCCCCchhhhHHHHHHhcc-CCeEEEEcCCCCCCCCCCCCC-Cccc
Confidence 344 5678999999999999885 36999999999999999999999986 599999999999999976421 0123
Q ss_pred CCHHHHHHHHHHHHHHhCCCCceEEEEecccch-HHHHHHHHhCcCccceeEEEcCCCCCCC--CCchhh----hhhhcc
Q 022534 88 FTENEFHEELDKLLDVLEVKYPFFLVVQGFLVG-SYGLTWALKNPSRISKLAILNSPLTASS--PLPGLF----QQLRIP 160 (295)
Q Consensus 88 ~~~~~~~~~l~~~~~~l~~~~~~~lv~~G~~~G-~~~~~~a~~~p~~v~~lil~~~p~~~~~--~~~~~~----~~~~~~ 160 (295)
|+.+++++++.+++++++.+++++++ |||+| .+++.+|.++|++|+++|+++++..... ..+... ..+..+
T Consensus 80 ~~~~~~~~~~~~~l~~l~~~~~~~lv--G~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (302)
T 1mj5_A 80 YAYAEHRDYLDALWEALDLGDRVVLV--VHDWGSALGFDWARRHRERVQGIAYMEAIAMPIEWADFPEQDRDLFQAFRSQ 157 (302)
T ss_dssp SCHHHHHHHHHHHHHHTTCTTCEEEE--EEHHHHHHHHHHHHHTGGGEEEEEEEEECCSCBCGGGSCGGGHHHHHHHHST
T ss_pred ccHHHHHHHHHHHHHHhCCCceEEEE--EECCccHHHHHHHHHCHHHHhheeeecccCCchhhhhhhHHHHHHHHHHhcc
Confidence 68899999999999999882357777 67765 5688889999999999999975443211 001000 001000
Q ss_pred cchhhhhhhHHHHHHHHHhCCCccccccccccccccccccCCchhHHHHHHHhcc-----------hhhhhHhhhcCcCC
Q 022534 161 LLGEFTAQNAIMAERFIEAGSPYVLKLDKADVYRLPYLASSGPGFALLEAARKVN-----------FKDISSRIGAGFSS 229 (295)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~ 229 (295)
...............+........+.......+...+.................. ..+....+
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l------ 231 (302)
T 1mj5_A 158 AGEELVLQDNVFVEQVLPGLILRPLSEAEMAAYREPFLAAGEARRPTLSWPRQIPIAGTPADVVAIARDYAGWL------ 231 (302)
T ss_dssp THHHHHTTTCHHHHTHHHHTSSSCCCHHHHHHHHGGGCSSSGGGHHHHHTGGGSCBTTBSHHHHHHHHHHHHHH------
T ss_pred chhhhhcChHHHHHHHHHhcCcccCCHHHHHHHHHHhhcccccccchHHHHHhccccccchhhHHHHHHHHhhh------
Confidence 0000000000011111111000000000000000000000000001111111100 00111111
Q ss_pred CCCCCcEEEEEeCCCCCCCcchHHHHHhcCCCCeEEEEecCCCCCCCCCChHHHHHHHHHHHHh
Q 022534 230 GSWDKPVLVAWGISDKYLPQSVAEEFQKGNPNVVKLQMIEGAGHMPQEDWPEKVVDGLRYFFLN 293 (295)
Q Consensus 230 ~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 293 (295)
.++++|+|+|+|++|.+++++.++.+++.+++ +++++ ++||++++|+|+++++.|.+|+..
T Consensus 232 ~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~--~~~~~-~~gH~~~~e~p~~~~~~i~~fl~~ 292 (302)
T 1mj5_A 232 SESPIPKLFINAEPGALTTGRMRDFCRTWPNQ--TEITV-AGAHFIQEDSPDEIGAAIAAFVRR 292 (302)
T ss_dssp TTCCSCEEEEEEEECSSSSHHHHHHHTTCSSE--EEEEE-EESSCGGGTCHHHHHHHHHHHHHH
T ss_pred hccCCCeEEEEeCCCCCCChHHHHHHHHhcCC--ceEEe-cCcCcccccCHHHHHHHHHHHHHh
Confidence 26799999999999999999999999988885 89999 999999999999999999999976
|
| >3ibt_A 1H-3-hydroxy-4-oxoquinoline 2,4-dioxygenase; QDO, oxidoreductase; 2.60A {Pseudomonas putida} | Back alignment and structure |
|---|
Probab=99.98 E-value=3.8e-31 Score=223.38 Aligned_cols=253 Identities=19% Similarity=0.259 Sum_probs=163.2
Q ss_pred eEEeCcEEEEEEEcCCCCCCCceEEEEcCCCCCCccchhhHHHhhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCCHHHHH
Q 022534 15 YIKSGEYRWFVRETGSADSRLGTIVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFH 94 (295)
Q Consensus 15 ~~~~~~~~~~~~~~g~~~~~~~~vv~lHG~~~~~~~w~~~~~~l~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~ 94 (295)
+++++|.+++|...|+++ +|+|||+||+++++..|..+++.|++ +|+|+++|+||||.|+.+.. .|+.++++
T Consensus 3 ~~~~~g~~l~~~~~g~~~--~~~vv~lHG~~~~~~~~~~~~~~L~~-~~~v~~~D~~G~G~S~~~~~-----~~~~~~~~ 74 (264)
T 3ibt_A 3 SLNVNGTLMTYSESGDPH--APTLFLLSGWCQDHRLFKNLAPLLAR-DFHVICPDWRGHDAKQTDSG-----DFDSQTLA 74 (264)
T ss_dssp CCEETTEECCEEEESCSS--SCEEEEECCTTCCGGGGTTHHHHHTT-TSEEEEECCTTCSTTCCCCS-----CCCHHHHH
T ss_pred eEeeCCeEEEEEEeCCCC--CCeEEEEcCCCCcHhHHHHHHHHHHh-cCcEEEEccccCCCCCCCcc-----ccCHHHHH
Confidence 678899999999998743 46999999999999999999999976 69999999999999997632 45889999
Q ss_pred HHHHHHHHHhCCCCceEEEEecccch-HHHHHHHHhC-cCccceeEEEcCCCCCCCCCchhhhhhhcc-cchhhhhhhHH
Q 022534 95 EELDKLLDVLEVKYPFFLVVQGFLVG-SYGLTWALKN-PSRISKLAILNSPLTASSPLPGLFQQLRIP-LLGEFTAQNAI 171 (295)
Q Consensus 95 ~~l~~~~~~l~~~~~~~lv~~G~~~G-~~~~~~a~~~-p~~v~~lil~~~p~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 171 (295)
+++.+++++++.++ ++++ |||+| .+++.+|.++ |++|+++|+++++. . ..+.....+... ...........
T Consensus 75 ~~~~~~l~~l~~~~-~~lv--GhS~Gg~ia~~~a~~~~p~~v~~lvl~~~~~-~--~~~~~~~~~~~~~~~~~~~~~~~~ 148 (264)
T 3ibt_A 75 QDLLAFIDAKGIRD-FQMV--STSHGCWVNIDVCEQLGAARLPKTIIIDWLL-Q--PHPGFWQQLAEGQHPTEYVAGRQS 148 (264)
T ss_dssp HHHHHHHHHTTCCS-EEEE--EETTHHHHHHHHHHHSCTTTSCEEEEESCCS-S--CCHHHHHHHHHTTCTTTHHHHHHH
T ss_pred HHHHHHHHhcCCCc-eEEE--ecchhHHHHHHHHHhhChhhhheEEEecCCC-C--cChhhcchhhcccChhhHHHHHHH
Confidence 99999999998874 6676 67766 5688899999 99999999997655 1 122211111100 00000000011
Q ss_pred HHHHHHHhCCCccccccccccccccccccCCchhH-HHHHHHhcc--hhhhhHhhhcCcCCCCCCCcEEEEEeC--CCCC
Q 022534 172 MAERFIEAGSPYVLKLDKADVYRLPYLASSGPGFA-LLEAARKVN--FKDISSRIGAGFSSGSWDKPVLVAWGI--SDKY 246 (295)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~--~~~~~~~~~~~~~~~~~~~P~l~i~G~--~D~~ 246 (295)
....+..... .......+..........+.. ......... ..+....+ .++++|+++|+|. +|..
T Consensus 149 ~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l------~~i~~P~lii~g~~~~~~~ 218 (264)
T 3ibt_A 149 FFDEWAETTD----NADVLNHLRNEMPWFHGEMWQRACREIEANYRTWGSPLDRM------DSLPQKPEICHIYSQPLSQ 218 (264)
T ss_dssp HHHHHHTTCC----CHHHHHHHHHTGGGSCHHHHHHHHHHHHHHHHHHSSHHHHH------HTCSSCCEEEEEECCSCCH
T ss_pred HHHHhcccCC----cHHHHHHHHHhhhhccchhHHHHHHHhccchhhccchhhcc------cccCCCeEEEEecCCccch
Confidence 1122221110 000000000000000000011 011111000 00011222 2679999999764 4433
Q ss_pred CCcchHHHHHhcCCCCeEEEEecCCCCCCCCCChHHHHHHHHHHHH
Q 022534 247 LPQSVAEEFQKGNPNVVKLQMIEGAGHMPQEDWPEKVVDGLRYFFL 292 (295)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~ 292 (295)
.+.+..+.+.+.+++ +++++++++||++++|+|++|++.|.+||.
T Consensus 219 ~~~~~~~~~~~~~~~-~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~ 263 (264)
T 3ibt_A 219 DYRQLQLEFAAGHSW-FHPRHIPGRTHFPSLENPVAVAQAIREFLQ 263 (264)
T ss_dssp HHHHHHHHHHHHCTT-EEEEECCCSSSCHHHHCHHHHHHHHHHHTC
T ss_pred hhHHHHHHHHHhCCC-ceEEEcCCCCCcchhhCHHHHHHHHHHHHh
Confidence 345667888888987 799999999999999999999999999985
|
| >4f0j_A Probable hydrolytic enzyme; alpha/beta hydrolase fold, structural genomics, joint center structural genomics, JCSG; HET: MSE; 1.50A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=99.98 E-value=9.6e-31 Score=225.68 Aligned_cols=259 Identities=17% Similarity=0.221 Sum_probs=162.8
Q ss_pred cEEEEEEEcCCCCCCCceEEEEcCCCCCCccchhhHHHhhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH
Q 022534 20 EYRWFVRETGSADSRLGTIVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEELDK 99 (295)
Q Consensus 20 ~~~~~~~~~g~~~~~~~~vv~lHG~~~~~~~w~~~~~~l~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~l~~ 99 (295)
+.+++|...++.++.+|+|||+||++++...|..+++.|+++||+|+++|+||||.|+.+.. ..++.+++++++.+
T Consensus 31 ~~~~~~~~~~~~~~~~p~vv~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~----~~~~~~~~~~~~~~ 106 (315)
T 4f0j_A 31 PLSMAYLDVAPKKANGRTILLMHGKNFCAGTWERTIDVLADAGYRVIAVDQVGFCKSSKPAH----YQYSFQQLAANTHA 106 (315)
T ss_dssp EEEEEEEEECCSSCCSCEEEEECCTTCCGGGGHHHHHHHHHTTCEEEEECCTTSTTSCCCSS----CCCCHHHHHHHHHH
T ss_pred CeeEEEeecCCCCCCCCeEEEEcCCCCcchHHHHHHHHHHHCCCeEEEeecCCCCCCCCCCc----cccCHHHHHHHHHH
Confidence 47777777766555578999999999999999999999998899999999999999997543 24688999999999
Q ss_pred HHHHhCCCCceEEEEecccch-HHHHHHHHhCcCccceeEEEcCCCCCCCC---Cc-hhhhhhhcccchhhhhhhHHHHH
Q 022534 100 LLDVLEVKYPFFLVVQGFLVG-SYGLTWALKNPSRISKLAILNSPLTASSP---LP-GLFQQLRIPLLGEFTAQNAIMAE 174 (295)
Q Consensus 100 ~~~~l~~~~~~~lv~~G~~~G-~~~~~~a~~~p~~v~~lil~~~p~~~~~~---~~-~~~~~~~~~~~~~~~~~~~~~~~ 174 (295)
+++.++.++ ++++ |||+| .+++.+|.++|++|+++++++++...... .+ ...... .............
T Consensus 107 ~~~~~~~~~-~~l~--G~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~ 179 (315)
T 4f0j_A 107 LLERLGVAR-ASVI--GHSMGGMLATRYALLYPRQVERLVLVNPIGLEDWKALGVPWRSVDDW----YRRDLQTSAEGIR 179 (315)
T ss_dssp HHHHTTCSC-EEEE--EETHHHHHHHHHHHHCGGGEEEEEEESCSCSSCHHHHTCCCCCHHHH----HHHHTTCCHHHHH
T ss_pred HHHHhCCCc-eEEE--EecHHHHHHHHHHHhCcHhhheeEEecCcccCCcccccchhhhhHHH----HhhcccCChHHHH
Confidence 999998874 6676 67766 46888899999999999999754321100 00 000000 0000000000000
Q ss_pred HHHHh-CCCccccccccccccc--cccccCCchhHHHHHHHhcchhhhhHhhhcCcCCCCCCCcEEEEEeCCCCCCC---
Q 022534 175 RFIEA-GSPYVLKLDKADVYRL--PYLASSGPGFALLEAARKVNFKDISSRIGAGFSSGSWDKPVLVAWGISDKYLP--- 248 (295)
Q Consensus 175 ~~~~~-~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~~--- 248 (295)
.+... ................ ................. ... ............++++|+|+|+|++|.+++
T Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~-~~~~~~~~~~l~~~~~P~lii~G~~D~~~p~~~ 256 (315)
T 4f0j_A 180 QYQQATYYAGEWRPEFDRWVQMQAGMYRGKGRESVAWNSAL--TYD-MIFTQPVVYELDRLQMPTLLLIGEKDNTAIGKD 256 (315)
T ss_dssp HHHHHHTSTTCCCGGGHHHHHHHHHHTTSTTHHHHHHHHHH--HHH-HHHHCCCGGGGGGCCSCEEEEEETTCCCCTTGG
T ss_pred HHHHHHHhccccCCchHHHHHHHHHHhhccCcchhhHHHHH--hcC-ccccchhhhhcccCCCCeEEEEecCCCcCcccc
Confidence 11100 0000000000000000 00000000000000000 000 000000000113678999999999999998
Q ss_pred -------------cchHHHHHhcCCCCeEEEEecCCCCCCCCCChHHHHHHHHHHHHh
Q 022534 249 -------------QSVAEEFQKGNPNVVKLQMIEGAGHMPQEDWPEKVVDGLRYFFLN 293 (295)
Q Consensus 249 -------------~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 293 (295)
.+.++.+.+..++ +++++++++||++++|+|+++++.|.+||++
T Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~gH~~~~~~p~~~~~~i~~fl~~ 313 (315)
T 4f0j_A 257 AAPAELKARLGNYAQLGKDAARRIPQ-ATLVEFPDLGHTPQIQAPERFHQALLEGLQT 313 (315)
T ss_dssp GSCHHHHTTSCCHHHHHHHHHHHSTT-EEEEEETTCCSCHHHHSHHHHHHHHHHHHCC
T ss_pred ccccccccccccchhhhhHHHhhcCC-ceEEEeCCCCcchhhhCHHHHHHHHHHHhcc
Confidence 6778888888886 7999999999999999999999999999975
|
| >1m33_A BIOH protein; alpha-betta-alpha sandwich, structural genomics, PSI, protei structure initiative; HET: MSE 3OH; 1.70A {Escherichia coli} SCOP: c.69.1.26 | Back alignment and structure |
|---|
Probab=99.97 E-value=9.7e-32 Score=227.31 Aligned_cols=244 Identities=19% Similarity=0.247 Sum_probs=147.8
Q ss_pred EEEEEEcCCCCCCCc-eEEEEcCCCCCCccchhhHHHhhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH
Q 022534 22 RWFVRETGSADSRLG-TIVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEELDKL 100 (295)
Q Consensus 22 ~~~~~~~g~~~~~~~-~vv~lHG~~~~~~~w~~~~~~l~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~l~~~ 100 (295)
+++|.+.|++ | +|||+||+++++..|..+++.|++ +|+|+++|+||||+|+.+ . .|+++++++++.
T Consensus 3 ~l~~~~~G~g----~~~vvllHG~~~~~~~w~~~~~~L~~-~~~vi~~Dl~G~G~S~~~-~-----~~~~~~~~~~l~-- 69 (258)
T 1m33_A 3 NIWWQTKGQG----NVHLVLLHGWGLNAEVWRCIDEELSS-HFTLHLVDLPGFGRSRGF-G-----ALSLADMAEAVL-- 69 (258)
T ss_dssp CCCEEEECCC----SSEEEEECCTTCCGGGGGGTHHHHHT-TSEEEEECCTTSTTCCSC-C-----CCCHHHHHHHHH--
T ss_pred ceEEEEecCC----CCeEEEECCCCCChHHHHHHHHHhhc-CcEEEEeeCCCCCCCCCC-C-----CcCHHHHHHHHH--
Confidence 5678888853 4 899999999999999999999985 899999999999999975 2 346777666554
Q ss_pred HHHhCCCCceEEEEecccch-HHHHHHHHhCcCccceeEEEcCCCC-CC-CCCchhhhhhhcccchhhhhhhHHHHHHHH
Q 022534 101 LDVLEVKYPFFLVVQGFLVG-SYGLTWALKNPSRISKLAILNSPLT-AS-SPLPGLFQQLRIPLLGEFTAQNAIMAERFI 177 (295)
Q Consensus 101 ~~~l~~~~~~~lv~~G~~~G-~~~~~~a~~~p~~v~~lil~~~p~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (295)
+.++ ++++|+ |||+| .+++.+|.++|++|+++|++++... .. ..++.........+...+.........++.
T Consensus 70 -~~l~--~~~~lv--GhS~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 144 (258)
T 1m33_A 70 -QQAP--DKAIWL--GWSLGGLVASQIALTHPERVRALVTVASSPCFSARDEWPGIKPDVLAGFQQQLSDDQQRTVERFL 144 (258)
T ss_dssp -TTSC--SSEEEE--EETHHHHHHHHHHHHCGGGEEEEEEESCCSCCBCBTTBCSBCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred -HHhC--CCeEEE--EECHHHHHHHHHHHHhhHhhceEEEECCCCCccccccccCCCHHHHHHHHHHHhccHHHHHHHHH
Confidence 4455 457777 67776 5788999999999999999865321 11 011100000000000000000000111222
Q ss_pred HhCCCcccc-ccccccccccccccCCchhH-HHH---HHHhcchhhhhHhhhcCcCCCCCCCcEEEEEeCCCCCCCcchH
Q 022534 178 EAGSPYVLK-LDKADVYRLPYLASSGPGFA-LLE---AARKVNFKDISSRIGAGFSSGSWDKPVLVAWGISDKYLPQSVA 252 (295)
Q Consensus 178 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~-~~~---~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~~~~~~ 252 (295)
......... .......+........+... +.. .....+..+ . ..++++|+|+|+|++|.+++.+.+
T Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~------l~~i~~P~l~i~G~~D~~~~~~~~ 215 (258)
T 1m33_A 145 ALQTMGTETARQDARALKKTVLALPMPEVDVLNGGLEILKTVDLRQ---P------LQNVSMPFLRLYGYLDGLVPRKVV 215 (258)
T ss_dssp HTTSTTSTTHHHHHHHHHHHHHTSCCCCHHHHHHHHHHHHHCCCTT---G------GGGCCSCEEEEEETTCSSSCGGGC
T ss_pred HHHhcCCccchhhHHHHHHHHHhccCCcHHHHHHHHHHHHhCCHHH---H------HhhCCCCEEEEeecCCCCCCHHHH
Confidence 110000000 00000000000000001000 100 011111111 1 126789999999999999998888
Q ss_pred HHHHhcCCCCeEEEEecCCCCCCCCCChHHHHHHHHHHHHh
Q 022534 253 EEFQKGNPNVVKLQMIEGAGHMPQEDWPEKVVDGLRYFFLN 293 (295)
Q Consensus 253 ~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 293 (295)
+.+.+.+++ +++++++++||++++|+|++|++.|.+|+.+
T Consensus 216 ~~~~~~~~~-~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 255 (258)
T 1m33_A 216 PMLDKLWPH-SESYIFAKAAHAPFISHPAEFCHLLVALKQR 255 (258)
T ss_dssp C-CTTTCTT-CEEEEETTCCSCHHHHSHHHHHHHHHHHHTT
T ss_pred HHHHHhCcc-ceEEEeCCCCCCccccCHHHHHHHHHHHHHh
Confidence 888888887 6999999999999999999999999999975
|
| >3qyj_A ALR0039 protein; alpha/beta fold, hydrolase; 1.78A {Nostoc SP} | Back alignment and structure |
|---|
Probab=99.97 E-value=1.2e-30 Score=225.41 Aligned_cols=266 Identities=21% Similarity=0.323 Sum_probs=161.0
Q ss_pred eeeEEeCcEEEEEEEcCCCCCCCceEEEEcCCCCCCccchhhHHHhhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCCHHH
Q 022534 13 GSYIKSGEYRWFVRETGSADSRLGTIVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTENE 92 (295)
Q Consensus 13 ~~~~~~~~~~~~~~~~g~~~~~~~~vv~lHG~~~~~~~w~~~~~~l~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~ 92 (295)
..+++++|.+++|.+.|.+ ++|||+||+++++..|..+++.|++ +|+|+++|+||||+|+++........|+.+.
T Consensus 7 ~~~~~~~~~~~~~~~~g~g----~~~vllHG~~~~~~~w~~~~~~l~~-~~~vi~~Dl~G~G~s~~~~~~~~~~~~~~~~ 81 (291)
T 3qyj_A 7 QTIVDTTEARINLVKAGHG----APLLLLHGYPQTHVMWHKIAPLLAN-NFTVVATDLRGYGDSSRPASVPHHINYSKRV 81 (291)
T ss_dssp EEEEECSSCEEEEEEECCS----SEEEEECCTTCCGGGGTTTHHHHTT-TSEEEEECCTTSTTSCCCCCCGGGGGGSHHH
T ss_pred eeEEecCCeEEEEEEcCCC----CeEEEECCCCCCHHHHHHHHHHHhC-CCEEEEEcCCCCCCCCCCCCCccccccCHHH
Confidence 3678999999999998853 5899999999999999999999975 8999999999999999765321123578899
Q ss_pred HHHHHHHHHHHhCCCCceEEEEecccchH-HHHHHHHhCcCccceeEEEcCCCCCC--CCCchhhhhhhc--------cc
Q 022534 93 FHEELDKLLDVLEVKYPFFLVVQGFLVGS-YGLTWALKNPSRISKLAILNSPLTAS--SPLPGLFQQLRI--------PL 161 (295)
Q Consensus 93 ~~~~l~~~~~~l~~~~~~~lv~~G~~~G~-~~~~~a~~~p~~v~~lil~~~p~~~~--~~~~~~~~~~~~--------~~ 161 (295)
+++++.+++++++.++ ++++ |||+|+ +++.+|.++|++|+++++++++.... ......+..... +.
T Consensus 82 ~~~~~~~~~~~l~~~~-~~l~--GhS~Gg~ia~~~a~~~p~~v~~lvl~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (291)
T 3qyj_A 82 MAQDQVEVMSKLGYEQ-FYVV--GHDRGARVAHRLALDHPHRVKKLALLDIAPTHKMYRTTDQEFATAYYHWFFLIQPDN 158 (291)
T ss_dssp HHHHHHHHHHHTTCSS-EEEE--EETHHHHHHHHHHHHCTTTEEEEEEESCCCHHHHHHTCCHHHHHHTTHHHHTTCSTT
T ss_pred HHHHHHHHHHHcCCCC-EEEE--EEChHHHHHHHHHHhCchhccEEEEECCCCcchhhhcchhhhhHHHHHHHHhccCCC
Confidence 9999999999998774 6777 777764 68889999999999999997532100 000000000000 00
Q ss_pred chh-hhhhh-HHHHHHHHHh-CCC-ccccccccccccccccccCCchh--HHHHHHHhcchhhhhHhhhcCcCCCCCCCc
Q 022534 162 LGE-FTAQN-AIMAERFIEA-GSP-YVLKLDKADVYRLPYLASSGPGF--ALLEAARKVNFKDISSRIGAGFSSGSWDKP 235 (295)
Q Consensus 162 ~~~-~~~~~-~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P 235 (295)
+.. ....+ ......++.. ... ..........+...+ ..++. ......+.....+....... ...+++||
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~i~~P 233 (291)
T 3qyj_A 159 LPETLIGANPEYYLRKCLEKWGKDFSAFHPQALAEYIRCF---SQPAVIHATCEDYRAAATIDLEHDELD--MKQKISCP 233 (291)
T ss_dssp HHHHHHHTCHHHHHHHHHHHHCSCGGGSCHHHHHHHHHHH---TSHHHHHHHHHHHHHHTTHHHHHHHTT--TTCCBCSC
T ss_pred chHHHHcCCHHHHHHHHHHhcCCCcccCCHHHHHHHHHHh---cCCCcchhHHHHHHcccccchhhcchh--cCCccccc
Confidence 000 00000 0001111110 000 000000000000000 01110 00111110000000001001 12478999
Q ss_pred EEEEEeCCCCCCC-cchHHHHHhcCCCCeEEEEecCCCCCCCCCChHHHHHHHHHHHHh
Q 022534 236 VLVAWGISDKYLP-QSVAEEFQKGNPNVVKLQMIEGAGHMPQEDWPEKVVDGLRYFFLN 293 (295)
Q Consensus 236 ~l~i~G~~D~~~~-~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 293 (295)
+|+|+|++|.+.+ ......+.+..++ ++..+++ |||++++|+|++|++.|++||..
T Consensus 234 ~Lvi~G~~D~~~~~~~~~~~~~~~~~~-~~~~~~~-~GH~~~~E~P~~v~~~i~~fL~~ 290 (291)
T 3qyj_A 234 VLVLWGEKGIIGRKYDVLATWRERAID-VSGQSLP-CGHFLPEEAPEETYQAIYNFLTH 290 (291)
T ss_dssp EEEEEETTSSHHHHSCHHHHHHTTBSS-EEEEEES-SSSCHHHHSHHHHHHHHHHHHHC
T ss_pred eEEEecccccccchhhHHHHHHhhcCC-cceeecc-CCCCchhhCHHHHHHHHHHHHhc
Confidence 9999999997543 2334555555664 7888886 99999999999999999999974
|
| >3r0v_A Alpha/beta hydrolase fold protein; structural genomics, PSI-biology, protein structure initiati alpha/beta hydrolase; HET: MSE; 1.38A {Sphaerobacter thermophilus} | Back alignment and structure |
|---|
Probab=99.97 E-value=2.9e-30 Score=217.31 Aligned_cols=254 Identities=19% Similarity=0.212 Sum_probs=162.8
Q ss_pred cceeeEEeCcEEEEEEEcCCCCCCCceEEEEcCCCCCCccchhhHHHhhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCCH
Q 022534 11 EYGSYIKSGEYRWFVRETGSADSRLGTIVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTE 90 (295)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~g~~~~~~~~vv~lHG~~~~~~~w~~~~~~l~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~ 90 (295)
+...+++.+|.+++|...|+ .|+|||+||++++...|..+++.|+ .||+|+++|+||||.|+.+. .++.
T Consensus 3 ~~~~~~~~~g~~l~~~~~g~----~~~vv~lHG~~~~~~~~~~~~~~l~-~~~~vi~~d~~G~G~S~~~~------~~~~ 71 (262)
T 3r0v_A 3 AMQTVPSSDGTPIAFERSGS----GPPVVLVGGALSTRAGGAPLAERLA-PHFTVICYDRRGRGDSGDTP------PYAV 71 (262)
T ss_dssp --CEEECTTSCEEEEEEEEC----SSEEEEECCTTCCGGGGHHHHHHHT-TTSEEEEECCTTSTTCCCCS------SCCH
T ss_pred hhheEEcCCCcEEEEEEcCC----CCcEEEECCCCcChHHHHHHHHHHh-cCcEEEEEecCCCcCCCCCC------CCCH
Confidence 45568888999999999885 3589999999999999999999998 69999999999999999753 3578
Q ss_pred HHHHHHHHHHHHHhCCCCceEEEEecccch-HHHHHHHHhCcCccceeEEEcCCCCCCCCCchhhhhhhcccchhhhhh-
Q 022534 91 NEFHEELDKLLDVLEVKYPFFLVVQGFLVG-SYGLTWALKNPSRISKLAILNSPLTASSPLPGLFQQLRIPLLGEFTAQ- 168 (295)
Q Consensus 91 ~~~~~~l~~~~~~l~~~~~~~lv~~G~~~G-~~~~~~a~~~p~~v~~lil~~~p~~~~~~~~~~~~~~~~~~~~~~~~~- 168 (295)
+++++++.++++.++ + +++++ |||+| .+++.+|.++| +|+++++++++.................+...+...
T Consensus 72 ~~~~~~~~~~~~~l~-~-~~~l~--G~S~Gg~ia~~~a~~~p-~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (262)
T 3r0v_A 72 EREIEDLAAIIDAAG-G-AAFVF--GMSSGAGLSLLAAASGL-PITRLAVFEPPYAVDDSRPPVPPDYQTRLDALLAEGR 146 (262)
T ss_dssp HHHHHHHHHHHHHTT-S-CEEEE--EETHHHHHHHHHHHTTC-CEEEEEEECCCCCCSTTSCCCCTTHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHhcC-C-CeEEE--EEcHHHHHHHHHHHhCC-CcceEEEEcCCcccccccchhhhHHHHHHHHHhhccc
Confidence 999999999999998 5 57777 66765 56888899999 999999997655433221110000000000000000
Q ss_pred hHHHHHHHHHhCCCcccccccccccc-ccc---cccCCchhHHHHHHHhcchhhhhHhhhcCcCCCCCCCcEEEEEeCCC
Q 022534 169 NAIMAERFIEAGSPYVLKLDKADVYR-LPY---LASSGPGFALLEAARKVNFKDISSRIGAGFSSGSWDKPVLVAWGISD 244 (295)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D 244 (295)
.......+...... ........+. .+. .......... ..............+ +++++|+|+|+|++|
T Consensus 147 ~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l------~~i~~P~lii~G~~D 217 (262)
T 3r0v_A 147 RGDAVTYFMTEGVG--VPPDLVAQMQQAPMWPGMEAVAHTLPY-DHAVMGDNTIPTARF------ASISIPTLVMDGGAS 217 (262)
T ss_dssp HHHHHHHHHHHTSC--CCHHHHHHHHTSTTHHHHHHTGGGHHH-HHHHHTTSCCCHHHH------TTCCSCEEEEECTTC
T ss_pred hhhHHHHHhhcccC--CCHHHHHHHHhhhcccchHHHHhhhhh-hhhhhhcCCCCHHHc------CcCCCCEEEEeecCC
Confidence 00111122211000 0000000000 000 0000000000 000000000111111 367899999999999
Q ss_pred CCCCcchHHHHHhcCCCCeEEEEecCCCCCCCCCChHHHHHHHHHHHHh
Q 022534 245 KYLPQSVAEEFQKGNPNVVKLQMIEGAGHMPQEDWPEKVVDGLRYFFLN 293 (295)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 293 (295)
.+++++.+.++++.+++ +++++++++|| +++|+++++.|.+||..
T Consensus 218 ~~~~~~~~~~~~~~~~~-~~~~~~~~~gH---~~~p~~~~~~i~~fl~~ 262 (262)
T 3r0v_A 218 PAWIRHTAQELADTIPN-ARYVTLENQTH---TVAPDAIAPVLVEFFTR 262 (262)
T ss_dssp CHHHHHHHHHHHHHSTT-EEEEECCCSSS---SCCHHHHHHHHHHHHC-
T ss_pred CCCCHHHHHHHHHhCCC-CeEEEecCCCc---ccCHHHHHHHHHHHHhC
Confidence 99999999999999987 79999999999 47999999999999863
|
| >3qit_A CURM TE, polyketide synthase; thioesterase, alpha/beta hydrolase, decarboxylase, sulfate elimination, terminal alkene production; 1.68A {Lyngbya majuscula 19L} | Back alignment and structure |
|---|
Probab=99.97 E-value=3.9e-30 Score=218.15 Aligned_cols=260 Identities=18% Similarity=0.215 Sum_probs=166.7
Q ss_pred ceeeEEeCcEEEEEEEcCCCCCCCceEEEEcCCCCCCccchhhHHHhhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCCHH
Q 022534 12 YGSYIKSGEYRWFVRETGSADSRLGTIVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTEN 91 (295)
Q Consensus 12 ~~~~~~~~~~~~~~~~~g~~~~~~~~vv~lHG~~~~~~~w~~~~~~l~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~ 91 (295)
...+++.+|.+++|...|+++ +|+|||+||++++...|..+++.|+++||+|+++|+||||.|+.+.. ...++.+
T Consensus 5 ~~~~~~~~g~~l~~~~~g~~~--~~~vv~~hG~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~---~~~~~~~ 79 (286)
T 3qit_A 5 EEKFLEFGGNQICLCSWGSPE--HPVVLCIHGILEQGLAWQEVALPLAAQGYRVVAPDLFGHGRSSHLEM---VTSYSSL 79 (286)
T ss_dssp EEEEEEETTEEEEEEEESCTT--SCEEEEECCTTCCGGGGHHHHHHHHHTTCEEEEECCTTSTTSCCCSS---GGGCSHH
T ss_pred hhheeecCCceEEEeecCCCC--CCEEEEECCCCcccchHHHHHHHhhhcCeEEEEECCCCCCCCCCCCC---CCCcCHH
Confidence 356889999999999998654 47999999999999999999999998889999999999999997642 2356889
Q ss_pred HHHHHHHHHHHHhCCCCceEEEEecccch-HHHHHHHHhCcCccceeEEEcCCCCCCCCC-chhhhhhhc--ccchh---
Q 022534 92 EFHEELDKLLDVLEVKYPFFLVVQGFLVG-SYGLTWALKNPSRISKLAILNSPLTASSPL-PGLFQQLRI--PLLGE--- 164 (295)
Q Consensus 92 ~~~~~l~~~~~~l~~~~~~~lv~~G~~~G-~~~~~~a~~~p~~v~~lil~~~p~~~~~~~-~~~~~~~~~--~~~~~--- 164 (295)
++++++.+++++++.++ ++++ |||+| .+++.+|.++|++|+++++++++....... ......+.. ..+..
T Consensus 80 ~~~~~~~~~~~~~~~~~-~~l~--G~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (286)
T 3qit_A 80 TFLAQIDRVIQELPDQP-LLLV--GHSMGAMLATAIASVRPKKIKELILVELPLPAEESKKESAVNQLTTCLDYLSSTPQ 156 (286)
T ss_dssp HHHHHHHHHHHHSCSSC-EEEE--EETHHHHHHHHHHHHCGGGEEEEEEESCCCCCCC---CCHHHHHHHHHHHHTCCCC
T ss_pred HHHHHHHHHHHhcCCCC-EEEE--EeCHHHHHHHHHHHhChhhccEEEEecCCCCCccccchhhhHHHHHHHHHHhcccc
Confidence 99999999999998764 6676 67766 468888999999999999997655433221 111110000 00000
Q ss_pred ---hhhhhHHHHHHHHHhCCCcccccccccccc-------ccccccCCchhHHHHHHHhc----chhhhhHhhhcCcCCC
Q 022534 165 ---FTAQNAIMAERFIEAGSPYVLKLDKADVYR-------LPYLASSGPGFALLEAARKV----NFKDISSRIGAGFSSG 230 (295)
Q Consensus 165 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~ 230 (295)
+..... ........ .+............ ..+.....+........... ...+....+ +
T Consensus 157 ~~~~~~~~~-~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~ 228 (286)
T 3qit_A 157 HPIFPDVAT-AASRLRQA-IPSLSEEFSYILAQRITQPNQGGVRWSWDAIIRTRSILGLNNLPGGRSQYLEML------K 228 (286)
T ss_dssp CCCBSSHHH-HHHHHHHH-STTSCHHHHHHHHHHTEEEETTEEEECSCGGGGGHHHHTTTSCTTHHHHHHHHH------H
T ss_pred ccccccHHH-HHHHhhcC-CcccCHHHHHHHhhccccccccceeeeechhhhccccccccccccchhHHHHHH------h
Confidence 000000 00000000 00000000000000 00000001100000000000 001111111 1
Q ss_pred CCCCcEEEEEeCCCCCCCcchHHHHHhcCCCCeEEEEecCCCCCCCCCChHHHHHHHHH
Q 022534 231 SWDKPVLVAWGISDKYLPQSVAEEFQKGNPNVVKLQMIEGAGHMPQEDWPEKVVDGLRY 289 (295)
Q Consensus 231 ~~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~ 289 (295)
++++|+++|+|++|.+++.+....+.+.+++ ++++++++ ||++++|+|+++++.|++
T Consensus 229 ~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~-~~~~~~~g-gH~~~~e~p~~~~~~i~~ 285 (286)
T 3qit_A 229 SIQVPTTLVYGDSSKLNRPEDLQQQKMTMTQ-AKRVFLSG-GHNLHIDAAAALASLILT 285 (286)
T ss_dssp HCCSCEEEEEETTCCSSCHHHHHHHHHHSTT-SEEEEESS-SSCHHHHTHHHHHHHHHC
T ss_pred ccCCCeEEEEeCCCcccCHHHHHHHHHHCCC-CeEEEeeC-CchHhhhChHHHHHHhhc
Confidence 5689999999999999999999999999987 69999999 999999999999998864
|
| >3dqz_A Alpha-hydroxynitrIle lyase-like protein; A/B-hydrloase fold, cyanogenesis; 2.50A {Arabidopsis thaliana} SCOP: c.69.1.0 | Back alignment and structure |
|---|
Probab=99.97 E-value=3e-30 Score=216.98 Aligned_cols=243 Identities=19% Similarity=0.216 Sum_probs=152.9
Q ss_pred ceEEEEcCCCCCCccchhhHHHhhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCceEEEEe
Q 022534 36 GTIVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEELDKLLDVLEVKYPFFLVVQ 115 (295)
Q Consensus 36 ~~vv~lHG~~~~~~~w~~~~~~l~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~~lv~~ 115 (295)
|+|||+||+++++..|..+++.|+++||+|+++|+||||.|+.+.. ..++.+++++++.+++++++..++++++
T Consensus 5 ~~vv~lHG~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~----~~~~~~~~~~~l~~~l~~l~~~~~~~lv-- 78 (258)
T 3dqz_A 5 HHFVLVHNAYHGAWIWYKLKPLLESAGHRVTAVELAASGIDPRPIQ----AVETVDEYSKPLIETLKSLPENEEVILV-- 78 (258)
T ss_dssp CEEEEECCTTCCGGGGTTHHHHHHHTTCEEEEECCTTSTTCSSCGG----GCCSHHHHHHHHHHHHHTSCTTCCEEEE--
T ss_pred CcEEEECCCCCccccHHHHHHHHHhCCCEEEEecCCCCcCCCCCCC----ccccHHHhHHHHHHHHHHhcccCceEEE--
Confidence 6999999999999999999999998889999999999999997532 1368899999999999999874567777
Q ss_pred cccch-HHHHHHHHhCcCccceeEEEcCCCCCCCCCch-hhhhhhc---ccchhhhhh-hHHHHHHHHHhCCCccccccc
Q 022534 116 GFLVG-SYGLTWALKNPSRISKLAILNSPLTASSPLPG-LFQQLRI---PLLGEFTAQ-NAIMAERFIEAGSPYVLKLDK 189 (295)
Q Consensus 116 G~~~G-~~~~~~a~~~p~~v~~lil~~~p~~~~~~~~~-~~~~~~~---~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 189 (295)
|||+| .+++.+|.++|++|+++|+++++......... ....... .+....... ... ..........
T Consensus 79 GhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~- 150 (258)
T 3dqz_A 79 GFSFGGINIALAADIFPAKIKVLVFLNAFLPDTTHVPSHVLDKYMEMPGGLGDCEFSSHETR-------NGTMSLLKMG- 150 (258)
T ss_dssp EETTHHHHHHHHHTTCGGGEEEEEEESCCCCCSSSCTTHHHHHHHTSTTCCTTCEEEEEEET-------TEEEEEEECC-
T ss_pred EeChhHHHHHHHHHhChHhhcEEEEecCCCCCCCCcchHHHHHhcccchhhhhcccchhhhh-------ccChhhhhhh-
Confidence 66766 56888899999999999999764332211111 1110000 000000000 000 0000000000
Q ss_pred cccccccccccCCc-hhHHHHHHHhcchhhhhHhhh--cCcC-CCCCCCcEEEEEeCCCCCCCcchHHHHHhcCCCCeEE
Q 022534 190 ADVYRLPYLASSGP-GFALLEAARKVNFKDISSRIG--AGFS-SGSWDKPVLVAWGISDKYLPQSVAEEFQKGNPNVVKL 265 (295)
Q Consensus 190 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~--~~~~-~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~ 265 (295)
.......+.....+ ........... .......+. .... ....++|+++|+|++|.+++++.++.+++.+++ +++
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~-~~~ 228 (258)
T 3dqz_A 151 PKFMKARLYQNCPIEDYELAKMLHRQ-GSFFTEDLSKKEKFSEEGYGSVQRVYVMSSEDKAIPCDFIRWMIDNFNV-SKV 228 (258)
T ss_dssp HHHHHHHTSTTSCHHHHHHHHHHCCC-EECCHHHHHTSCCCCTTTGGGSCEEEEEETTCSSSCHHHHHHHHHHSCC-SCE
T ss_pred HHHHHHHhhccCCHHHHHHHHHhccC-CchhhhhhhccccccccccccCCEEEEECCCCeeeCHHHHHHHHHhCCc-ccE
Confidence 00000000000000 00000000000 000000000 0011 112369999999999999999999999999987 699
Q ss_pred EEecCCCCCCCCCChHHHHHHHHHHHHhc
Q 022534 266 QMIEGAGHMPQEDWPEKVVDGLRYFFLNY 294 (295)
Q Consensus 266 ~~i~~~gH~~~~e~p~~~~~~i~~fl~~~ 294 (295)
++++++||++++|+|+++++.|.+|++++
T Consensus 229 ~~~~~~gH~~~~~~p~~~~~~i~~fl~~~ 257 (258)
T 3dqz_A 229 YEIDGGDHMVMLSKPQKLFDSLSAIATDY 257 (258)
T ss_dssp EEETTCCSCHHHHSHHHHHHHHHHHHHHT
T ss_pred EEcCCCCCchhhcChHHHHHHHHHHHHHh
Confidence 99999999999999999999999999875
|
| >3fsg_A Alpha/beta superfamily hydrolase; PF00561, MCSG, PSI, PSI-2, structural genomics, protein structure initiative, midwest for structural genomics; 2.00A {Oenococcus oeni} | Back alignment and structure |
|---|
Probab=99.97 E-value=2.1e-31 Score=225.03 Aligned_cols=257 Identities=15% Similarity=0.118 Sum_probs=166.0
Q ss_pred eEEeCcEEEEEEEcCCCCCCCceEEEEcCCCCCCccchhhHHHhhh-CCCeEEEeCCCCCCCCCCCCCCCCCCCCCHHHH
Q 022534 15 YIKSGEYRWFVRETGSADSRLGTIVFLHGAPSHSYSYRNVMSQMSD-AGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEF 93 (295)
Q Consensus 15 ~~~~~~~~~~~~~~g~~~~~~~~vv~lHG~~~~~~~w~~~~~~l~~-~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~ 93 (295)
+++++|.+++|.+.|+ .|+|||+||+++++..|..+++.|++ .||+|+++|+||||.|+.+.. ++.+++
T Consensus 5 ~~~~~g~~l~y~~~g~----~~~vv~lhG~~~~~~~~~~~~~~l~~~~g~~v~~~d~~G~G~s~~~~~------~~~~~~ 74 (272)
T 3fsg_A 5 KEYLTRSNISYFSIGS----GTPIIFLHGLSLDKQSTCLFFEPLSNVGQYQRIYLDLPGMGNSDPISP------STSDNV 74 (272)
T ss_dssp CCEECTTCCEEEEECC----SSEEEEECCTTCCHHHHHHHHTTSTTSTTSEEEEECCTTSTTCCCCSS------CSHHHH
T ss_pred EEEecCCeEEEEEcCC----CCeEEEEeCCCCcHHHHHHHHHHHhccCceEEEEecCCCCCCCCCCCC------CCHHHH
Confidence 6788999999999884 35899999999999999999999986 599999999999999997542 578999
Q ss_pred HHHHHHHHHH-hCCCCceEEEEecccch-HHHHHHHHhCcCccceeEEEcCCCCCCCC---Cchhhhhhhcccchhhhhh
Q 022534 94 HEELDKLLDV-LEVKYPFFLVVQGFLVG-SYGLTWALKNPSRISKLAILNSPLTASSP---LPGLFQQLRIPLLGEFTAQ 168 (295)
Q Consensus 94 ~~~l~~~~~~-l~~~~~~~lv~~G~~~G-~~~~~~a~~~p~~v~~lil~~~p~~~~~~---~~~~~~~~~~~~~~~~~~~ 168 (295)
++++.+++++ ++.+ +++++ |||+| .+++.+|.++|++|+++++++++...... .+.........+.......
T Consensus 75 ~~~~~~~l~~~~~~~-~~~l~--G~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (272)
T 3fsg_A 75 LETLIEAIEEIIGAR-RFILY--GHSYGGYLAQAIAFHLKDQTLGVFLTCPVITADHSKRLTGKHINILEEDINPVENKE 151 (272)
T ss_dssp HHHHHHHHHHHHTTC-CEEEE--EEEHHHHHHHHHHHHSGGGEEEEEEEEECSSCCGGGCCCCCCCCEECSCCCCCTTGG
T ss_pred HHHHHHHHHHHhCCC-cEEEE--EeCchHHHHHHHHHhChHhhheeEEECcccccCccccccccchhhhhhhhhcccCHH
Confidence 9999999999 7766 46776 67766 56888999999999999998754422110 0000000000000000000
Q ss_pred hHHHHHHHHHhCCCccccccccccc-cccccccCCchhHHHHHHHhcchhhhhHhhhcCcCCCCCCCcEEEEEeCCCCCC
Q 022534 169 NAIMAERFIEAGSPYVLKLDKADVY-RLPYLASSGPGFALLEAARKVNFKDISSRIGAGFSSGSWDKPVLVAWGISDKYL 247 (295)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~ 247 (295)
. ...+...... ........+ .............+..........+.... ....++++|+|+|+|++|.++
T Consensus 152 ~---~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~P~l~i~g~~D~~~ 222 (272)
T 3fsg_A 152 Y---FADFLSMNVI--INNQAWHDYQNLIIPGLQKEDKTFIDQLQNNYSFTFEEK----LKNINYQFPFKIMVGRNDQVV 222 (272)
T ss_dssp G---HHHHHHHCSE--ESHHHHHHHHHHTHHHHHHCCHHHHHHHTTSCSCTTHHH----HTTCCCSSCEEEEEETTCTTT
T ss_pred H---HHHHHHHhcc--CCCchhHHHHHHhhhhhhhccHHHHHHHhhhcCCChhhh----hhhccCCCCEEEEEeCCCCcC
Confidence 0 0011110000 000000000 00000000000001111110000000000 012477999999999999999
Q ss_pred CcchHHHHHhcCCCCeEEEEecCCCCCCCCCChHHHHHHHHHHHHhc
Q 022534 248 PQSVAEEFQKGNPNVVKLQMIEGAGHMPQEDWPEKVVDGLRYFFLNY 294 (295)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~ 294 (295)
+++.+..+.+.+++ +++++++++||++++|+|+++++.|.+||...
T Consensus 223 ~~~~~~~~~~~~~~-~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~ 268 (272)
T 3fsg_A 223 GYQEQLKLINHNEN-GEIVLLNRTGHNLMIDQREAVGFHFDLFLDEL 268 (272)
T ss_dssp CSHHHHHHHTTCTT-EEEEEESSCCSSHHHHTHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHhcCC-CeEEEecCCCCCchhcCHHHHHHHHHHHHHHh
Confidence 99999999999986 79999999999999999999999999999763
|
| >2e3j_A Epoxide hydrolase EPHB; epoxide hydrolase B, structural mycobacterium tuberculosis structural proteomics project, X hydrolase; 2.10A {Mycobacterium tuberculosis} PDB: 2zjf_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=3.4e-30 Score=228.47 Aligned_cols=126 Identities=24% Similarity=0.366 Sum_probs=106.8
Q ss_pred eeeEEeCcEEEEEEEcCCCCCCCceEEEEcCCCCCCccchhhHHHhhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCCHHH
Q 022534 13 GSYIKSGEYRWFVRETGSADSRLGTIVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTENE 92 (295)
Q Consensus 13 ~~~~~~~~~~~~~~~~g~~~~~~~~vv~lHG~~~~~~~w~~~~~~l~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~ 92 (295)
..+++.+|.+++|.+.|+..+.+|+|||+||+++++..|..+++.|++.||+|+++|+||||.|+.+.. ...|+.++
T Consensus 5 ~~~~~~~g~~l~y~~~G~~~~~~~~vv~~hG~~~~~~~~~~~~~~l~~~g~~vi~~d~~g~g~s~~~~~---~~~~~~~~ 81 (356)
T 2e3j_A 5 HRILNCRGTRIHAVADSPPDQQGPLVVLLHGFPESWYSWRHQIPALAGAGYRVVAIDQRGYGRSSKYRV---QKAYRIKE 81 (356)
T ss_dssp EEEEEETTEEEEEEEECCTTCCSCEEEEECCTTCCGGGGTTTHHHHHHTTCEEEEECCTTSTTSCCCCS---GGGGSHHH
T ss_pred EEEEccCCeEEEEEEecCCCCCCCEEEEECCCCCcHHHHHHHHHHHHHcCCEEEEEcCCCCCCCCCCCc---ccccCHHH
Confidence 467889999999999986433457999999999999999999999987789999999999999997542 12468899
Q ss_pred HHHHHHHHHHHhCCCCceEEEEecccch-HHHHHHHHhCcCccceeEEEcCCC
Q 022534 93 FHEELDKLLDVLEVKYPFFLVVQGFLVG-SYGLTWALKNPSRISKLAILNSPL 144 (295)
Q Consensus 93 ~~~~l~~~~~~l~~~~~~~lv~~G~~~G-~~~~~~a~~~p~~v~~lil~~~p~ 144 (295)
+++++.++++.++.++ ++++ |||+| .+++.+|.++|++|+++|+++++.
T Consensus 82 ~~~~~~~~~~~l~~~~-~~l~--G~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~ 131 (356)
T 2e3j_A 82 LVGDVVGVLDSYGAEQ-AFVV--GHDWGAPVAWTFAWLHPDRCAGVVGISVPF 131 (356)
T ss_dssp HHHHHHHHHHHTTCSC-EEEE--EETTHHHHHHHHHHHCGGGEEEEEEESSCC
T ss_pred HHHHHHHHHHHcCCCC-eEEE--EECHhHHHHHHHHHhCcHhhcEEEEECCcc
Confidence 9999999999998875 6666 77776 568888999999999999997665
|
| >2wtm_A EST1E; hydrolase; 1.60A {Clostridium proteoclasticum} PDB: 2wtn_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=9e-30 Score=214.70 Aligned_cols=234 Identities=21% Similarity=0.260 Sum_probs=160.0
Q ss_pred eEEeCcEEEEEEEcCCCC--CCCceEEEEcCCCCC--CccchhhHHHhhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCCH
Q 022534 15 YIKSGEYRWFVRETGSAD--SRLGTIVFLHGAPSH--SYSYRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTE 90 (295)
Q Consensus 15 ~~~~~~~~~~~~~~g~~~--~~~~~vv~lHG~~~~--~~~w~~~~~~l~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~ 90 (295)
.++.+|.++++..+++.. .+.|+|||+||++++ +..|..+++.|+++||+|+++|+||||.|+.+.. .++.
T Consensus 5 ~~~~~g~~l~~~~~~p~~~~~~~p~vvl~HG~~~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~-----~~~~ 79 (251)
T 2wtm_A 5 YIDCDGIKLNAYLDMPKNNPEKCPLCIIIHGFTGHSEERHIVAVQETLNEIGVATLRADMYGHGKSDGKFE-----DHTL 79 (251)
T ss_dssp EEEETTEEEEEEEECCTTCCSSEEEEEEECCTTCCTTSHHHHHHHHHHHHTTCEEEEECCTTSTTSSSCGG-----GCCH
T ss_pred EEecCCcEEEEEEEccCCCCCCCCEEEEEcCCCcccccccHHHHHHHHHHCCCEEEEecCCCCCCCCCccc-----cCCH
Confidence 456789999988776542 235789999999999 8889999999988899999999999999986421 3577
Q ss_pred HHHHHHHHHHHHHhC----CCCceEEEEecccch-HHHHHHHHhCcCccceeEEEcCCCCCCCCCchhhhhhhcccchhh
Q 022534 91 NEFHEELDKLLDVLE----VKYPFFLVVQGFLVG-SYGLTWALKNPSRISKLAILNSPLTASSPLPGLFQQLRIPLLGEF 165 (295)
Q Consensus 91 ~~~~~~l~~~~~~l~----~~~~~~lv~~G~~~G-~~~~~~a~~~p~~v~~lil~~~p~~~~~~~~~~~~~~~~~~~~~~ 165 (295)
+++++|+.++++.+. ++ +++++ |||+| .+++.+|.++|++|+++|+++++... ...... .......
T Consensus 80 ~~~~~d~~~~~~~l~~~~~~~-~~~lv--GhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~----~~~~~~--~~~~~~~ 150 (251)
T 2wtm_A 80 FKWLTNILAVVDYAKKLDFVT-DIYMA--GHSQGGLSVMLAAAMERDIIKALIPLSPAAMI----PEIART--GELLGLK 150 (251)
T ss_dssp HHHHHHHHHHHHHHTTCTTEE-EEEEE--EETHHHHHHHHHHHHTTTTEEEEEEESCCTTH----HHHHHH--TEETTEE
T ss_pred HHHHHHHHHHHHHHHcCcccc-eEEEE--EECcchHHHHHHHHhCcccceEEEEECcHHHh----HHHHhh--hhhcccc
Confidence 889999999999884 33 46676 77776 46788899999999999998543210 000000 0000000
Q ss_pred hhhhHHHHHHHHHhCCCccccccccccccccccccCCchhHHHHHHHhcchhhhhHhhhcCcCCCCCCCcEEEEEeCCCC
Q 022534 166 TAQNAIMAERFIEAGSPYVLKLDKADVYRLPYLASSGPGFALLEAARKVNFKDISSRIGAGFSSGSWDKPVLVAWGISDK 245 (295)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~ 245 (295)
+.....+.... ...... ....+.......+. ...+ .++++|+|+|+|++|.
T Consensus 151 ----------~~~~~~~~~~~----~~~~~~------~~~~~~~~~~~~~~---~~~~------~~i~~P~lii~G~~D~ 201 (251)
T 2wtm_A 151 ----------FDPENIPDELD----AWDGRK------LKGNYVRVAQTIRV---EDFV------DKYTKPVLIVHGDQDE 201 (251)
T ss_dssp ----------CBTTBCCSEEE----ETTTEE------EETHHHHHHTTCCH---HHHH------HHCCSCEEEEEETTCS
T ss_pred ----------CCchhcchHHh----hhhccc------cchHHHHHHHccCH---HHHH------HhcCCCEEEEEeCCCC
Confidence 00000000000 000000 00112222111111 1111 1468999999999999
Q ss_pred CCCcchHHHHHhcCCCCeEEEEecCCCCCCCCCChHHHHHHHHHHHHh
Q 022534 246 YLPQSVAEEFQKGNPNVVKLQMIEGAGHMPQEDWPEKVVDGLRYFFLN 293 (295)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 293 (295)
+++++.++.+++.+++ +++++++++||++ .|+|+++++.|.+|+..
T Consensus 202 ~v~~~~~~~~~~~~~~-~~~~~~~~~gH~~-~~~~~~~~~~i~~fl~~ 247 (251)
T 2wtm_A 202 AVPYEASVAFSKQYKN-CKLVTIPGDTHCY-DHHLELVTEAVKEFMLE 247 (251)
T ss_dssp SSCHHHHHHHHHHSSS-EEEEEETTCCTTC-TTTHHHHHHHHHHHHHH
T ss_pred CcChHHHHHHHHhCCC-cEEEEECCCCccc-chhHHHHHHHHHHHHHH
Confidence 9999999999988886 8999999999999 99999999999999976
|
| >3r40_A Fluoroacetate dehalogenase; FACD, defluorinase, alpha/beta hydrolase, hydrolase; 1.05A {Rhodopseudomonas palustris} PDB: 3r3w_A 3r3x_A 3r3v_A 3r3u_A 3r3z_A 3r41_A 3r3y_A | Back alignment and structure |
|---|
Probab=99.97 E-value=1.5e-30 Score=223.55 Aligned_cols=271 Identities=21% Similarity=0.324 Sum_probs=163.1
Q ss_pred cceeeEEeCcEEEEEEEcCCCCCCCceEEEEcCCCCCCccchhhHHHhhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCCH
Q 022534 11 EYGSYIKSGEYRWFVRETGSADSRLGTIVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTE 90 (295)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~g~~~~~~~~vv~lHG~~~~~~~w~~~~~~l~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~ 90 (295)
....+++.+|.+++|.+.|+ +|+|||+||++++...|..+++.|.+ ||+|+++|+||||.|+.+........|+.
T Consensus 13 ~~~~~~~~~g~~l~~~~~g~----~~~vv~lHG~~~~~~~~~~~~~~l~~-~~~v~~~D~~G~G~S~~~~~~~~~~~~~~ 87 (306)
T 3r40_A 13 FGSEWINTSSGRIFARVGGD----GPPLLLLHGFPQTHVMWHRVAPKLAE-RFKVIVADLPGYGWSDMPESDEQHTPYTK 87 (306)
T ss_dssp CEEEEECCTTCCEEEEEEEC----SSEEEEECCTTCCGGGGGGTHHHHHT-TSEEEEECCTTSTTSCCCCCCTTCGGGSH
T ss_pred CceEEEEeCCEEEEEEEcCC----CCeEEEECCCCCCHHHHHHHHHHhcc-CCeEEEeCCCCCCCCCCCCCCcccCCCCH
Confidence 45678888999999999883 36999999999999999999999987 99999999999999998654211225688
Q ss_pred HHHHHHHHHHHHHhCCCCceEEEEecccch-HHHHHHHHhCcCccceeEEEcCCCCCC--CCCchhhhhhh-------c-
Q 022534 91 NEFHEELDKLLDVLEVKYPFFLVVQGFLVG-SYGLTWALKNPSRISKLAILNSPLTAS--SPLPGLFQQLR-------I- 159 (295)
Q Consensus 91 ~~~~~~l~~~~~~l~~~~~~~lv~~G~~~G-~~~~~~a~~~p~~v~~lil~~~p~~~~--~~~~~~~~~~~-------~- 159 (295)
+++++++.+++++++.++ ++++ |||+| .+++.+|.++|++|+++|+++++.... ........... .
T Consensus 88 ~~~~~~~~~~l~~l~~~~-~~lv--GhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (306)
T 3r40_A 88 RAMAKQLIEAMEQLGHVH-FALA--GHNRGARVSYRLALDSPGRLSKLAVLDILPTYEYWQRMNRAYALKIYHWSFLAQP 164 (306)
T ss_dssp HHHHHHHHHHHHHTTCSS-EEEE--EETHHHHHHHHHHHHCGGGEEEEEEESCCCHHHHHHHCSHHHHHHSTHHHHHTSC
T ss_pred HHHHHHHHHHHHHhCCCC-EEEE--EecchHHHHHHHHHhChhhccEEEEecCCCCccchhhhhhhhhhhhHHHHHhhcc
Confidence 999999999999998774 6777 67766 568889999999999999997532100 00000000000 0
Q ss_pred -ccchhhhhh-hHHHHHHHHHhCC----CccccccccccccccccccCCch-h-HHHHHHHhcchhhhhHhhhcCcCCCC
Q 022534 160 -PLLGEFTAQ-NAIMAERFIEAGS----PYVLKLDKADVYRLPYLASSGPG-F-ALLEAARKVNFKDISSRIGAGFSSGS 231 (295)
Q Consensus 160 -~~~~~~~~~-~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (295)
++....... .......+..... ...........+...+ ..++ . ............+............+
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 241 (306)
T 3r40_A 165 APLPENLLGGDPDFYVKAKLASWTRAGDLSAFDPRAVEHYRIAF---ADPMRRHVMCEDYRAGAYADFEHDKIDVEAGNK 241 (306)
T ss_dssp TTHHHHHHTSCHHHHHHHHHHHTSSSSSSTTSCHHHHHHHHHHH---TSHHHHHHHHHHHHHHHTHHHHHHHHHHHHTCC
T ss_pred cchHHHHHcCCHHHHHHHHhhcccCCCccccCCHHHHHHHHHHH---ccCCCcchhhHHHHhcccccchhhhhhhhhccC
Confidence 000000000 0001111111100 0000000000000000 0000 0 00011100000000000000001247
Q ss_pred CCCcEEEEEeCCCCCCC-cchHHHHHhcCCCCeEEEEecCCCCCCCCCChHHHHHHHHHHHHhc
Q 022534 232 WDKPVLVAWGISDKYLP-QSVAEEFQKGNPNVVKLQMIEGAGHMPQEDWPEKVVDGLRYFFLNY 294 (295)
Q Consensus 232 ~~~P~l~i~G~~D~~~~-~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~ 294 (295)
+++|+|+|+|++|.+++ ......+.+..++ ++++++ ++||++++|+|+++++.|.+||.+.
T Consensus 242 i~~P~lii~g~~D~~~~~~~~~~~~~~~~~~-~~~~~~-~~gH~~~~e~p~~~~~~i~~fl~~~ 303 (306)
T 3r40_A 242 IPVPMLALWGASGIAQSAATPLDVWRKWASD-VQGAPI-ESGHFLPEEAPDQTAEALVRFFSAA 303 (306)
T ss_dssp BCSCEEEEEETTCC------CHHHHHHHBSS-EEEEEE-SSCSCHHHHSHHHHHHHHHHHHHC-
T ss_pred CCcceEEEEecCCcccCchhHHHHHHhhcCC-CeEEEe-cCCcCchhhChHHHHHHHHHHHHhc
Confidence 89999999999999988 5566777777776 799999 7899999999999999999999763
|
| >4fbl_A LIPS lipolytic enzyme; thermostable, structural genomics, enzyme function initiativ structural proteomics in europe, spine; HET: SPD; 1.99A {Unidentified} PDB: 4fbm_A | Back alignment and structure |
|---|
Probab=99.97 E-value=1.3e-30 Score=224.08 Aligned_cols=225 Identities=19% Similarity=0.216 Sum_probs=146.9
Q ss_pred ceEEEEcCCCCCCccchhhHHHhhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh--CCCCceEEE
Q 022534 36 GTIVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEELDKLLDVL--EVKYPFFLV 113 (295)
Q Consensus 36 ~~vv~lHG~~~~~~~w~~~~~~l~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~l~~~~~~l--~~~~~~~lv 113 (295)
+.|||+||+++++..|..+++.|+++||+|+++|+||||.|..... .++.+++++|+.++++.+ +.+ +++++
T Consensus 52 ~~VlllHG~~~s~~~~~~la~~La~~Gy~Via~Dl~GhG~S~~~~~-----~~~~~~~~~d~~~~~~~l~~~~~-~v~lv 125 (281)
T 4fbl_A 52 IGVLVSHGFTGSPQSMRFLAEGFARAGYTVATPRLTGHGTTPAEMA-----ASTASDWTADIVAAMRWLEERCD-VLFMT 125 (281)
T ss_dssp EEEEEECCTTCCGGGGHHHHHHHHHTTCEEEECCCTTSSSCHHHHH-----TCCHHHHHHHHHHHHHHHHHHCS-EEEEE
T ss_pred ceEEEECCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCCCCcccc-----CCCHHHHHHHHHHHHHHHHhCCC-eEEEE
Confidence 4699999999999999999999998899999999999999975322 246788999999999887 344 46676
Q ss_pred Eecccch-HHHHHHHHhCcCccceeEEEcCCCCCCCCCchhhhhhhcccchhhhhhhHHHHHHHHHhCCCcccccccccc
Q 022534 114 VQGFLVG-SYGLTWALKNPSRISKLAILNSPLTASSPLPGLFQQLRIPLLGEFTAQNAIMAERFIEAGSPYVLKLDKADV 192 (295)
Q Consensus 114 ~~G~~~G-~~~~~~a~~~p~~v~~lil~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (295)
|||+| .+++.+|.++|++|+++|+++++..... +.. .... +...... ........ .... ..
T Consensus 126 --G~S~GG~ia~~~a~~~p~~v~~lvl~~~~~~~~~--~~~-~~~~--~~~~~~~--------~~~~~~~~-~~~~--~~ 187 (281)
T 4fbl_A 126 --GLSMGGALTVWAAGQFPERFAGIMPINAALRMES--PDL-AALA--FNPDAPA--------ELPGIGSD-IKAE--GV 187 (281)
T ss_dssp --EETHHHHHHHHHHHHSTTTCSEEEEESCCSCCCC--HHH-HHHH--TCTTCCS--------EEECCCCC-CSST--TC
T ss_pred --EECcchHHHHHHHHhCchhhhhhhcccchhcccc--hhh-HHHH--HhHhhHH--------hhhcchhh-hhhH--HH
Confidence 77766 5788899999999999999975543221 110 0000 0000000 00000000 0000 00
Q ss_pred ccccccccCCchhHHHHHHHhcchhhhhHhhhcCcCCCCCCCcEEEEEeCCCCCCCcchHHHHHhcCCC-CeEEEEecCC
Q 022534 193 YRLPYLASSGPGFALLEAARKVNFKDISSRIGAGFSSGSWDKPVLVAWGISDKYLPQSVAEEFQKGNPN-VVKLQMIEGA 271 (295)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~-~~~~~~i~~~ 271 (295)
....+.. .+...+.+... . .......+ .++++|+|+|+|++|.+++++.++.+++.++. +++++++|++
T Consensus 188 ~~~~~~~--~~~~~~~~~~~-~-~~~~~~~l------~~i~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~~~~l~~~~~~ 257 (281)
T 4fbl_A 188 KELAYPV--TPVPAIKHLIT-I-GAVAEMLL------PRVKCPALIIQSREDHVVPPHNGELIYNGIGSTEKELLWLENS 257 (281)
T ss_dssp CCCCCSE--EEGGGHHHHHH-H-HHHHHHHG------GGCCSCEEEEEESSCSSSCTHHHHHHHHHCCCSSEEEEEESSC
T ss_pred HHhhhcc--CchHHHHHHHH-h-hhhccccc------cccCCCEEEEEeCCCCCcCHHHHHHHHHhCCCCCcEEEEECCC
Confidence 0000000 00001111000 0 00111111 26789999999999999999999999888753 4689999999
Q ss_pred CCCCCCC-ChHHHHHHHHHHHHhc
Q 022534 272 GHMPQED-WPEKVVDGLRYFFLNY 294 (295)
Q Consensus 272 gH~~~~e-~p~~~~~~i~~fl~~~ 294 (295)
||+++.| +|+++++.|.+||+.+
T Consensus 258 gH~~~~e~~~e~v~~~i~~FL~~H 281 (281)
T 4fbl_A 258 YHVATLDNDKELILERSLAFIRKH 281 (281)
T ss_dssp CSCGGGSTTHHHHHHHHHHHHHTC
T ss_pred CCcCccccCHHHHHHHHHHHHHhC
Confidence 9998887 5999999999999864
|
| >3sty_A Methylketone synthase 1; alpha/beta hydrolase, decarboxylase, hydrolase; HET: DKA; 1.70A {Lycopersicon hirsutum F} PDB: 3stu_A* 3stt_A* 3stv_A* 3stw_A* 3stx_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=1.2e-30 Score=220.46 Aligned_cols=243 Identities=18% Similarity=0.172 Sum_probs=152.6
Q ss_pred CCceEEEEcCCCCCCccchhhHHHhhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhC-CCCceEE
Q 022534 34 RLGTIVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEELDKLLDVLE-VKYPFFL 112 (295)
Q Consensus 34 ~~~~vv~lHG~~~~~~~w~~~~~~l~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~l~~~~~~l~-~~~~~~l 112 (295)
.+|+|||+||+++++..|..+++.|+++||+|+++|+||||.|+.+.. ..++++++++++.+++++++ .+ ++++
T Consensus 11 ~~~~vvllHG~~~~~~~~~~~~~~l~~~g~~v~~~D~~G~G~S~~~~~----~~~~~~~~~~~~~~~l~~l~~~~-~~~l 85 (267)
T 3sty_A 11 VKKHFVLVHAAFHGAWCWYKIVALMRSSGHNVTALDLGASGINPKQAL----QIPNFSDYLSPLMEFMASLPANE-KIIL 85 (267)
T ss_dssp CCCEEEEECCTTCCGGGGHHHHHHHHHTTCEEEEECCTTSTTCSCCGG----GCCSHHHHHHHHHHHHHTSCTTS-CEEE
T ss_pred CCCeEEEECCCCCCcchHHHHHHHHHhcCCeEEEeccccCCCCCCcCC----ccCCHHHHHHHHHHHHHhcCCCC-CEEE
Confidence 357999999999999999999999988789999999999999997632 23688999999999999995 55 5777
Q ss_pred EEecccch-HHHHHHHHhCcCccceeEEEcCCCCCCCCCch-hhhhh--h-cccch-hhhhhhHHHHHHHHHhCCCcccc
Q 022534 113 VVQGFLVG-SYGLTWALKNPSRISKLAILNSPLTASSPLPG-LFQQL--R-IPLLG-EFTAQNAIMAERFIEAGSPYVLK 186 (295)
Q Consensus 113 v~~G~~~G-~~~~~~a~~~p~~v~~lil~~~p~~~~~~~~~-~~~~~--~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 186 (295)
+ |||+| .+++.+|.++|++|+++++++++......... ..... . ..+.. .+..... . ...+...
T Consensus 86 v--GhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~-~~~~~~~- 155 (267)
T 3sty_A 86 V--GHALGGLAISKAMETFPEKISVAVFLSGLMPGPNIDATTVCTKAGSAVLGQLDNCVTYENG------P-TNPPTTL- 155 (267)
T ss_dssp E--EETTHHHHHHHHHHHSGGGEEEEEEESCCCCBTTBCHHHHHHHHHHTTTTCTTCEEECTTC------T-TSCCCEE-
T ss_pred E--EEcHHHHHHHHHHHhChhhcceEEEecCCCCCCcchHHHHHHHhcccchhhhhhhhhhhhh------h-hcccchh-
Confidence 7 67766 46888899999999999999765432211110 00000 0 00000 0000000 0 0000000
Q ss_pred ccccccccccccccCCch-hHHHHHHHh-cch---hhhhHhhhcCcCC-CCCCCcEEEEEeCCCCCCCcchHHHHHhcCC
Q 022534 187 LDKADVYRLPYLASSGPG-FALLEAARK-VNF---KDISSRIGAGFSS-GSWDKPVLVAWGISDKYLPQSVAEEFQKGNP 260 (295)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~-~~~---~~~~~~~~~~~~~-~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~~ 260 (295)
.......+..+.....+. ......... ... .+.... ..... ...++|+++|+|++|.+++++....+++.++
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~ 233 (267)
T 3sty_A 156 IAGPKFLATNVYHLSPIEDLALATALVRPLYLYLAEDISKE--VVLSSKRYGSVKRVFIVATENDALKKEFLKLMIEKNP 233 (267)
T ss_dssp ECCHHHHHHHTSTTSCHHHHHHHHHHCCCEECCCHHHHHHH--CCCCTTTGGGSCEEEEECCCSCHHHHHHHHHHHHHSC
T ss_pred hhhHHHHHHhhcccCCHHHHHHHHHhhccchhHHHHHhhcc--hhcccccccCCCEEEEEeCCCCccCHHHHHHHHHhCC
Confidence 000000000000000000 000000000 000 000000 01111 1125999999999999999999999999998
Q ss_pred CCeEEEEecCCCCCCCCCChHHHHHHHHHHHHhc
Q 022534 261 NVVKLQMIEGAGHMPQEDWPEKVVDGLRYFFLNY 294 (295)
Q Consensus 261 ~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~ 294 (295)
+ +++++++++||++++|+|+++++.|.+|++++
T Consensus 234 ~-~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~ 266 (267)
T 3sty_A 234 P-DEVKEIEGSDHVTMMSKPQQLFTTLLSIANKY 266 (267)
T ss_dssp C-SEEEECTTCCSCHHHHSHHHHHHHHHHHHHHC
T ss_pred C-ceEEEeCCCCccccccChHHHHHHHHHHHHhc
Confidence 7 79999999999999999999999999999875
|
| >3i1i_A Homoserine O-acetyltransferase; structural genomics, IDP01610, O-acetyltransfera bacillus anthracis; HET: MSE; 2.44A {Bacillus anthracis str} | Back alignment and structure |
|---|
Probab=99.97 E-value=1.2e-30 Score=231.35 Aligned_cols=265 Identities=12% Similarity=0.113 Sum_probs=159.2
Q ss_pred cEEEEEEEcCCCCC-CCceEEEEcCCCCCCcc-------------chhhH---HHhhhCCCeEEEeCCCCCCCCC-----
Q 022534 20 EYRWFVRETGSADS-RLGTIVFLHGAPSHSYS-------------YRNVM---SQMSDAGFHCFAPDWLGFGFSD----- 77 (295)
Q Consensus 20 ~~~~~~~~~g~~~~-~~~~vv~lHG~~~~~~~-------------w~~~~---~~l~~~~~~via~Dl~G~G~S~----- 77 (295)
+++++|.++|++++ .+|+|||+||+++++.. |+.++ +.|.+.+|+|+++|+||||.|+
T Consensus 26 ~~~i~y~~~g~~~~~~~p~vll~HG~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~l~~~~~~vi~~D~~G~G~S~G~~~g 105 (377)
T 3i1i_A 26 PVQMGYETYGTLNRERSNVILICHYFSATSHAAGKYTAHDEESGWWDGLIGPGKAIDTNQYFVICTDNLCNVQVKNPHVI 105 (377)
T ss_dssp EEEEEEEEESCCCTTCCCEEEEECCTTCCSCCSSCSSTTCSSCCTTTTTEETTSSEETTTCEEEEECCTTCSCTTSTTCC
T ss_pred eeeEEEEeecccCCCCCCEEEEeccccCcchhccccccccccccchhhhcCCCCccccccEEEEEecccccccccCCCcc
Confidence 78899999986543 35799999999999877 88888 6776679999999999998855
Q ss_pred --CCCCCC----CC-----CCCCHHHHHHHHHHHHHHhCCCCceEEEEecccch-HHHHHHHHhCcCccceeEE-EcCCC
Q 022534 78 --KPEKGY----DD-----FDFTENEFHEELDKLLDVLEVKYPFFLVVQGFLVG-SYGLTWALKNPSRISKLAI-LNSPL 144 (295)
Q Consensus 78 --~~~~~~----~~-----~~~~~~~~~~~l~~~~~~l~~~~~~~lv~~G~~~G-~~~~~~a~~~p~~v~~lil-~~~p~ 144 (295)
.+.... .. ..|+++++++++.++++++++++.++|+ |||+| .+++.+|+++|++|+++|+ ++++.
T Consensus 106 ~~g~~~~~p~~~~~~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~ilv--GhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~ 183 (377)
T 3i1i_A 106 TTGPKSINPKTGDEYAMDFPVFTFLDVARMQCELIKDMGIARLHAVM--GPSAGGMIAQQWAVHYPHMVERMIGVITNPQ 183 (377)
T ss_dssp CCSTTSBCTTTSSBCGGGSCCCCHHHHHHHHHHHHHHTTCCCBSEEE--EETHHHHHHHHHHHHCTTTBSEEEEESCCSB
T ss_pred cCCCCCCCCCCCCcccCCCCCCCHHHHHHHHHHHHHHcCCCcEeeEE--eeCHhHHHHHHHHHHChHHHHHhcccCcCCC
Confidence 111000 00 1568899999999999999988754366 77776 4688899999999999999 55433
Q ss_pred CCCCCCchhh---hh-h-hcc-cc-hhh---hhhhHHHHH-----------HHH-HhCCCcccccc----------cccc
Q 022534 145 TASSPLPGLF---QQ-L-RIP-LL-GEF---TAQNAIMAE-----------RFI-EAGSPYVLKLD----------KADV 192 (295)
Q Consensus 145 ~~~~~~~~~~---~~-~-~~~-~~-~~~---~~~~~~~~~-----------~~~-~~~~~~~~~~~----------~~~~ 192 (295)
.......... .. . ..+ +. ..+ ......... .++ ........... ....
T Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (377)
T 3i1i_A 184 NPIITSVNVAQNAIEAIRLDPSWKGGKYGEEQPMKGLQLANRMMFMNAFDEHFYETTYPRNSIEVEPYEKVSSLTSFEKE 263 (377)
T ss_dssp CCHHHHHHTTHHHHHHHHHSGGGGGGCCTTSCCHHHHHHHHHHHHTTSSCHHHHHHHSCCCSSCCGGGTCTTCCCHHHHH
T ss_pred cCCchhhHHHHHHHHHHhcCCCccCCccccCCccchHHHHHHHHhhhcCCHHHHHHHhhhhhccccccccccchhHHHHH
Confidence 2110000000 00 0 000 00 000 000000000 000 00000000000 0000
Q ss_pred ccc---cccccCCch-h-HHHHHHHhcch----hhhhHhhhcCcCCCCCCCcEEEEEeCCCCCCCcchHHHHHhcC----
Q 022534 193 YRL---PYLASSGPG-F-ALLEAARKVNF----KDISSRIGAGFSSGSWDKPVLVAWGISDKYLPQSVAEEFQKGN---- 259 (295)
Q Consensus 193 ~~~---~~~~~~~~~-~-~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~---- 259 (295)
.+. ......... + .........+. .+....+ .++++|+|+|+|++|.+++++.++.+++.+
T Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l------~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~g 337 (377)
T 3i1i_A 264 INKLTYRSIELVDANSWMYTAKAVLLHDIAHGFSSLEEAL------SNVEANVLMIPCKQDLLQPSRYNYKMVDLLQKQG 337 (377)
T ss_dssp HHHHHHHTTTTCCHHHHHHHHHHHHHCBTTTTSSCHHHHH------HTCCSEEEEECBTTCSSSCTHHHHHHHHHHHHTT
T ss_pred HHHHHhhhhcccCHHHHHHHHHHHhhcccccccCCHHHHH------hhCCCCEEEEecCCccccCHHHHHHHHHHHHhcC
Confidence 000 000000000 0 00001110000 0001111 267899999999999999999999998888
Q ss_pred CCCeEEEEecC-CCCCCCCCChHHHHHHHHHHHHh
Q 022534 260 PNVVKLQMIEG-AGHMPQEDWPEKVVDGLRYFFLN 293 (295)
Q Consensus 260 ~~~~~~~~i~~-~gH~~~~e~p~~~~~~i~~fl~~ 293 (295)
++ ++++++++ +||++++|+|++|++.|.+||..
T Consensus 338 ~~-~~~~~i~~~~gH~~~~e~p~~~~~~i~~fl~~ 371 (377)
T 3i1i_A 338 KY-AEVYEIESINGHMAGVFDIHLFEKKVYEFLNR 371 (377)
T ss_dssp CC-EEECCBCCTTGGGHHHHCGGGTHHHHHHHHHS
T ss_pred CC-ceEEEcCCCCCCcchhcCHHHHHHHHHHHHHh
Confidence 76 79999998 99999999999999999999976
|
| >3hss_A Putative bromoperoxidase; alpha beta hydrolase, oxidoreductase, hydrolase; 1.90A {Mycobacterium tuberculosis} PDB: 3e3a_A 3hys_A 3hzo_A | Back alignment and structure |
|---|
Probab=99.97 E-value=3e-30 Score=221.19 Aligned_cols=257 Identities=18% Similarity=0.208 Sum_probs=162.9
Q ss_pred EeCcEEEEEEEcCCCCCCCceEEEEcCCCCCCccch-hhHHHhhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCCHHHHHH
Q 022534 17 KSGEYRWFVRETGSADSRLGTIVFLHGAPSHSYSYR-NVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHE 95 (295)
Q Consensus 17 ~~~~~~~~~~~~g~~~~~~~~vv~lHG~~~~~~~w~-~~~~~l~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~ 95 (295)
+.++.+++|...|+ .|+|||+||++++...|. .+++.|.+.||+|+++|+||||.|+.+. .++.+++++
T Consensus 29 ~~~~~~l~y~~~g~----~~~vv~lHG~~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~s~~~~------~~~~~~~~~ 98 (293)
T 3hss_A 29 EFRVINLAYDDNGT----GDPVVFIAGRGGAGRTWHPHQVPAFLAAGYRCITFDNRGIGATENAE------GFTTQTMVA 98 (293)
T ss_dssp TSCEEEEEEEEECS----SEEEEEECCTTCCGGGGTTTTHHHHHHTTEEEEEECCTTSGGGTTCC------SCCHHHHHH
T ss_pred ccccceEEEEEcCC----CCEEEEECCCCCchhhcchhhhhhHhhcCCeEEEEccCCCCCCCCcc------cCCHHHHHH
Confidence 45689999999884 368999999999999999 7888887779999999999999998643 357899999
Q ss_pred HHHHHHHHhCCCCceEEEEecccch-HHHHHHHHhCcCccceeEEEcCCCCCCCCCchhhhhhhcccchh--hhhhhHHH
Q 022534 96 ELDKLLDVLEVKYPFFLVVQGFLVG-SYGLTWALKNPSRISKLAILNSPLTASSPLPGLFQQLRIPLLGE--FTAQNAIM 172 (295)
Q Consensus 96 ~l~~~~~~l~~~~~~~lv~~G~~~G-~~~~~~a~~~p~~v~~lil~~~p~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~ 172 (295)
++.++++.++.++ ++++ |||+| .+++.+|.++|++|+++++++++..... ...........+... ........
T Consensus 99 ~~~~~l~~l~~~~-~~lv--GhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (293)
T 3hss_A 99 DTAALIETLDIAP-ARVV--GVSMGAFIAQELMVVAPELVSSAVLMATRGRLDR-ARQFFNKAEAELYDSGVQLPPTYDA 174 (293)
T ss_dssp HHHHHHHHHTCCS-EEEE--EETHHHHHHHHHHHHCGGGEEEEEEESCCSSCCH-HHHHHHHHHHHHHHHTCCCCHHHHH
T ss_pred HHHHHHHhcCCCc-EEEE--eeCccHHHHHHHHHHChHHHHhhheecccccCCh-hhhHHHHHHHHHHhhcccchhhHHH
Confidence 9999999998875 6676 67766 4678889999999999999975433211 000000000000000 00000000
Q ss_pred HHHHHHhCCCcccccc-cccccccccc-ccCCchhHHHHHHHhcchhhhhHhhhcCcCCCCCCCcEEEEEeCCCCCCCcc
Q 022534 173 AERFIEAGSPYVLKLD-KADVYRLPYL-ASSGPGFALLEAARKVNFKDISSRIGAGFSSGSWDKPVLVAWGISDKYLPQS 250 (295)
Q Consensus 173 ~~~~~~~~~~~~~~~~-~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~~~~ 250 (295)
.........+...... ....+..... ........+..........+....+ +++++|+|+|+|++|.+++++
T Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l------~~i~~P~lii~g~~D~~~~~~ 248 (293)
T 3hss_A 175 RARLLENFSRKTLNDDVAVGDWIAMFSMWPIKSTPGLRCQLDCAPQTNRLPAY------RNIAAPVLVIGFADDVVTPPY 248 (293)
T ss_dssp HHHHHHHSCHHHHTCHHHHHHHHHHHHHSCCCCCHHHHHHHTSSCSSCCHHHH------TTCCSCEEEEEETTCSSSCHH
T ss_pred HHHHhhhcccccccccccHHHHHHHHhhccccccHHHHhHhhhccccchHHHH------hhCCCCEEEEEeCCCCCCCHH
Confidence 0000000000000000 0000000000 0000000000000000001111111 367899999999999999999
Q ss_pred hHHHHHhcCCCCeEEEEecCCCCCCCCCChHHHHHHHHHHHHhc
Q 022534 251 VAEEFQKGNPNVVKLQMIEGAGHMPQEDWPEKVVDGLRYFFLNY 294 (295)
Q Consensus 251 ~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~ 294 (295)
.+..+.+.+++ +++++++++||++++|+|+++++.|.+||.+.
T Consensus 249 ~~~~~~~~~~~-~~~~~~~~~gH~~~~~~p~~~~~~i~~fl~~~ 291 (293)
T 3hss_A 249 LGREVADALPN-GRYLQIPDAGHLGFFERPEAVNTAMLKFFASV 291 (293)
T ss_dssp HHHHHHHHSTT-EEEEEETTCCTTHHHHSHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHCCC-ceEEEeCCCcchHhhhCHHHHHHHHHHHHHhc
Confidence 99999999987 79999999999999999999999999999864
|
| >1tqh_A Carboxylesterase precursor; tetrahedral intermediate, alpha/beta hydrolase; 1.63A {Geobacillus stearothermophilus} SCOP: c.69.1.29 PDB: 1r1d_A* 4diu_A | Back alignment and structure |
|---|
Probab=99.97 E-value=5.9e-30 Score=215.64 Aligned_cols=234 Identities=15% Similarity=0.270 Sum_probs=148.4
Q ss_pred CcEEEEEEEcCCCCCCCceEEEEcCCCCCCccchhhHHHhhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH
Q 022534 19 GEYRWFVRETGSADSRLGTIVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEELD 98 (295)
Q Consensus 19 ~~~~~~~~~~g~~~~~~~~vv~lHG~~~~~~~w~~~~~~l~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~l~ 98 (295)
++..++|. +. .++|||+||+++++..|..+++.|+++||+|+++|+||||.|..+. ..|+.+++++|+.
T Consensus 6 ~~~~~~~~--~~----~~~vvllHG~~~~~~~~~~~~~~L~~~g~~vi~~D~~GhG~s~~~~-----~~~~~~~~~~d~~ 74 (247)
T 1tqh_A 6 PPKPFFFE--AG----ERAVLLLHGFTGNSADVRMLGRFLESKGYTCHAPIYKGHGVPPEEL-----VHTGPDDWWQDVM 74 (247)
T ss_dssp CCCCEEEC--CS----SCEEEEECCTTCCTHHHHHHHHHHHHTTCEEEECCCTTSSSCHHHH-----TTCCHHHHHHHHH
T ss_pred CCCCeeeC--CC----CcEEEEECCCCCChHHHHHHHHHHHHCCCEEEecccCCCCCCHHHh-----cCCCHHHHHHHHH
Confidence 45566665 32 2589999999999999999999998779999999999999775321 1346777776665
Q ss_pred H---HHHHhCCCCceEEEEecccch-HHHHHHHHhCcCccceeEEEcCCCCCCCCCchhhhhhhcccchhhhhhhHHHHH
Q 022534 99 K---LLDVLEVKYPFFLVVQGFLVG-SYGLTWALKNPSRISKLAILNSPLTASSPLPGLFQQLRIPLLGEFTAQNAIMAE 174 (295)
Q Consensus 99 ~---~~~~l~~~~~~~lv~~G~~~G-~~~~~~a~~~p~~v~~lil~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (295)
+ +++++++++ ++|+ |||+| .+++.+|.++| |+++|++++|..... ...... .+ ..+ ..
T Consensus 75 ~~~~~l~~~~~~~-~~lv--G~SmGG~ia~~~a~~~p--v~~lvl~~~~~~~~~--~~~~~~---~~-~~~-------~~ 136 (247)
T 1tqh_A 75 NGYEFLKNKGYEK-IAVA--GLSLGGVFSLKLGYTVP--IEGIVTMCAPMYIKS--EETMYE---GV-LEY-------AR 136 (247)
T ss_dssp HHHHHHHHHTCCC-EEEE--EETHHHHHHHHHHTTSC--CSCEEEESCCSSCCC--HHHHHH---HH-HHH-------HH
T ss_pred HHHHHHHHcCCCe-EEEE--EeCHHHHHHHHHHHhCC--CCeEEEEcceeecCc--chhhhH---HH-HHH-------HH
Confidence 4 666777775 6666 77776 56888899999 999998876653211 100000 00 000 00
Q ss_pred HHHH-hCCCccccccccccccccccccCCchhHHHHHHHhcchhhhhHhhhcCcCCCCCCCcEEEEEeCCCCCCCcchHH
Q 022534 175 RFIE-AGSPYVLKLDKADVYRLPYLASSGPGFALLEAARKVNFKDISSRIGAGFSSGSWDKPVLVAWGISDKYLPQSVAE 253 (295)
Q Consensus 175 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~~~~~~~ 253 (295)
.+.. .... ......... .+............... .+....+ .++++|+|+|+|++|+++|++.++
T Consensus 137 ~~~~~~~~~---~~~~~~~~~-~~~~~~~~~~~~~~~~~----~~~~~~l------~~i~~P~Lii~G~~D~~~p~~~~~ 202 (247)
T 1tqh_A 137 EYKKREGKS---EEQIEQEME-KFKQTPMKTLKALQELI----ADVRDHL------DLIYAPTFVVQARHDEMINPDSAN 202 (247)
T ss_dssp HHHHHHTCC---HHHHHHHHH-HHTTSCCTTHHHHHHHH----HHHHHTG------GGCCSCEEEEEETTCSSSCTTHHH
T ss_pred Hhhcccccc---hHHHHhhhh-cccCCCHHHHHHHHHHH----HHHHhhc------ccCCCCEEEEecCCCCCCCcchHH
Confidence 0000 0000 000000000 00000000001111100 1111111 267899999999999999999999
Q ss_pred HHHhcCCC-CeEEEEecCCCCCCCCCC-hHHHHHHHHHHHHhcC
Q 022534 254 EFQKGNPN-VVKLQMIEGAGHMPQEDW-PEKVVDGLRYFFLNYT 295 (295)
Q Consensus 254 ~~~~~~~~-~~~~~~i~~~gH~~~~e~-p~~~~~~i~~fl~~~~ 295 (295)
.+++.+++ .+++++++++||++++|+ |++|++.|.+||.+.+
T Consensus 203 ~~~~~~~~~~~~~~~~~~~gH~~~~e~~~~~~~~~i~~Fl~~~~ 246 (247)
T 1tqh_A 203 IIYNEIESPVKQIKWYEQSGHVITLDQEKDQLHEDIYAFLESLD 246 (247)
T ss_dssp HHHHHCCCSSEEEEEETTCCSSGGGSTTHHHHHHHHHHHHHHSC
T ss_pred HHHHhcCCCceEEEEeCCCceeeccCccHHHHHHHHHHHHHhcc
Confidence 99998885 369999999999999885 8999999999998753
|
| >2qmq_A Protein NDRG2, protein NDR2; alpha/beta-hydrolases fold, NDR family, developmental protei differentiation, neurogenesis, phosphorylation; HET: 2PE; 1.70A {Mus musculus} PDB: 2xmq_A 2xmr_A 2xms_A | Back alignment and structure |
|---|
Probab=99.97 E-value=3.4e-30 Score=220.74 Aligned_cols=263 Identities=14% Similarity=0.125 Sum_probs=161.0
Q ss_pred eeeEEeCcEEEEEEEcCCCCCCCceEEEEcCCCCCCcc-chh-----hHHHhhhCCCeEEEeCCCCCCCCCCCCCCCCCC
Q 022534 13 GSYIKSGEYRWFVRETGSADSRLGTIVFLHGAPSHSYS-YRN-----VMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDF 86 (295)
Q Consensus 13 ~~~~~~~~~~~~~~~~g~~~~~~~~vv~lHG~~~~~~~-w~~-----~~~~l~~~~~~via~Dl~G~G~S~~~~~~~~~~ 86 (295)
+..+..+|.+++|.+.|++++.+|+|||+||++++... |.. +++.|++ +|+|+++|+||||.|+...+. .+
T Consensus 13 ~~~~~~~~~~l~y~~~G~~~~~~p~vvllHG~~~~~~~~~~~~~~~~~~~~L~~-~~~vi~~D~~G~G~s~~~~~~--~~ 89 (286)
T 2qmq_A 13 THSVETPYGSVTFTVYGTPKPKRPAIFTYHDVGLNYKSCFQPLFRFGDMQEIIQ-NFVRVHVDAPGMEEGAPVFPL--GY 89 (286)
T ss_dssp EEEEEETTEEEEEEEESCCCTTCCEEEEECCTTCCHHHHHHHHHTSHHHHHHHT-TSCEEEEECTTTSTTCCCCCT--TC
T ss_pred ccccccCCeEEEEEeccCCCCCCCeEEEeCCCCCCchhhhhhhhhhchhHHHhc-CCCEEEecCCCCCCCCCCCCC--CC
Confidence 45667789999999999754346799999999998875 665 7888986 799999999999998764322 22
Q ss_pred C-CCHHHHHHHHHHHHHHhCCCCceEEEEecccch-HHHHHHHHhCcCccceeEEEcCCCCCCCCCchhhhhhhcccchh
Q 022534 87 D-FTENEFHEELDKLLDVLEVKYPFFLVVQGFLVG-SYGLTWALKNPSRISKLAILNSPLTASSPLPGLFQQLRIPLLGE 164 (295)
Q Consensus 87 ~-~~~~~~~~~l~~~~~~l~~~~~~~lv~~G~~~G-~~~~~~a~~~p~~v~~lil~~~p~~~~~~~~~~~~~~~~~~~~~ 164 (295)
. ++.+++++++.++++.++.++ ++++ |||+| .+++.+|.++|++|+++|+++++..... ...............
T Consensus 90 ~~~~~~~~~~~l~~~l~~l~~~~-~~lv--G~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~-~~~~~~~~~~~~~~~ 165 (286)
T 2qmq_A 90 QYPSLDQLADMIPCILQYLNFST-IIGV--GVGAGAYILSRYALNHPDTVEGLVLINIDPNAKG-WMDWAAHKLTGLTSS 165 (286)
T ss_dssp CCCCHHHHHHTHHHHHHHHTCCC-EEEE--EETHHHHHHHHHHHHCGGGEEEEEEESCCCCCCC-HHHHHHHHHHHTTSC
T ss_pred CccCHHHHHHHHHHHHHHhCCCc-EEEE--EEChHHHHHHHHHHhChhheeeEEEECCCCcccc-hhhhhhhhhcccccc
Confidence 2 488999999999999998874 6676 67765 5688889999999999999976432211 110000000000000
Q ss_pred hhhhhHHHHHHHHHhCCCccccccccccccccccccCCch--hHHHHHHHhcchhhhhHhhhcCcCCCCCCCcEEEEEeC
Q 022534 165 FTAQNAIMAERFIEAGSPYVLKLDKADVYRLPYLASSGPG--FALLEAARKVNFKDISSRIGAGFSSGSWDKPVLVAWGI 242 (295)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~ 242 (295)
. .......+..... ..........+.........+. ..+........ +. ... .-...++++|+|+|+|+
T Consensus 166 ~---~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~-~~~--~~~l~~i~~P~lii~G~ 236 (286)
T 2qmq_A 166 I---PDMILGHLFSQEE-LSGNSELIQKYRGIIQHAPNLENIELYWNSYNNRR--DL-NFE--RGGETTLKCPVMLVVGD 236 (286)
T ss_dssp H---HHHHHHHHSCHHH-HHTTCHHHHHHHHHHHTCTTHHHHHHHHHHHHTCC--CC-CSE--ETTEECCCSCEEEEEET
T ss_pred c---hHHHHHHHhcCCC-CCcchHHHHHHHHHHHhcCCcchHHHHHHHHhhhh--hh-hhh--hchhccCCCCEEEEecC
Confidence 0 0000001100000 0000000000000000000000 00111100000 00 000 00113678999999999
Q ss_pred CCCCCCcchHHHHHhcCCCCeEEEEecCCCCCCCCCChHHHHHHHHHHHH
Q 022534 243 SDKYLPQSVAEEFQKGNPNVVKLQMIEGAGHMPQEDWPEKVVDGLRYFFL 292 (295)
Q Consensus 243 ~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~ 292 (295)
+|++++ ...+.+.+..+.++++++++++||++++|+|+++++.|.+||.
T Consensus 237 ~D~~~~-~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~ 285 (286)
T 2qmq_A 237 QAPHED-AVVECNSKLDPTQTSFLKMADSGGQPQLTQPGKLTEAFKYFLQ 285 (286)
T ss_dssp TSTTHH-HHHHHHHHSCGGGEEEEEETTCTTCHHHHCHHHHHHHHHHHHC
T ss_pred CCcccc-HHHHHHHHhcCCCceEEEeCCCCCcccccChHHHHHHHHHHhc
Confidence 999987 4566667777634899999999999999999999999999985
|
| >1r3d_A Conserved hypothetical protein VC1974; structural genomics, hydrolase, NYSGXRC, NEW YORK SGX research center for structural genomics, PSI; 1.90A {Vibrio cholerae} SCOP: c.69.1.35 | Back alignment and structure |
|---|
Probab=99.97 E-value=5e-30 Score=217.98 Aligned_cols=243 Identities=12% Similarity=0.154 Sum_probs=139.1
Q ss_pred cCCCCCCCceEEEEcCCCCCCccchhhHHHhhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCC
Q 022534 28 TGSADSRLGTIVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEELDKLLDVLEVK 107 (295)
Q Consensus 28 ~g~~~~~~~~vv~lHG~~~~~~~w~~~~~~l~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~ 107 (295)
+|+++..+|+|||+||+++++..|..+++.|++.+|+|+++|+||||.|+.+. .++++++++++.+++++++.+
T Consensus 9 ~g~~~~~~~~vvllHG~~~~~~~w~~~~~~L~~~~~~vi~~Dl~GhG~S~~~~------~~~~~~~a~~l~~~l~~l~~~ 82 (264)
T 1r3d_A 9 FAKPTARTPLVVLVHGLLGSGADWQPVLSHLARTQCAALTLDLPGHGTNPERH------CDNFAEAVEMIEQTVQAHVTS 82 (264)
T ss_dssp SSCCBTTBCEEEEECCTTCCGGGGHHHHHHHTTSSCEEEEECCTTCSSCC-------------CHHHHHHHHHHHTTCCT
T ss_pred cCCCCCCCCcEEEEcCCCCCHHHHHHHHHHhcccCceEEEecCCCCCCCCCCC------ccCHHHHHHHHHHHHHHhCcC
Confidence 45543324789999999999999999999998458999999999999998642 135689999999999999887
Q ss_pred C-ceEEEEecccch-HHHHH---HHHhCcCccceeEEEcCCCCCCCCCchhhhhhh--cccchhhhhh-hHHHHHHHHHh
Q 022534 108 Y-PFFLVVQGFLVG-SYGLT---WALKNPSRISKLAILNSPLTASSPLPGLFQQLR--IPLLGEFTAQ-NAIMAERFIEA 179 (295)
Q Consensus 108 ~-~~~lv~~G~~~G-~~~~~---~a~~~p~~v~~lil~~~p~~~~~~~~~~~~~~~--~~~~~~~~~~-~~~~~~~~~~~ 179 (295)
+ |++|+ |||+| .+++. +|.++|++|+++|+++++...... ........ ..+...+... .......+..
T Consensus 83 ~~p~~lv--GhSmGG~va~~~~~~a~~~p~~v~~lvl~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 158 (264)
T 1r3d_A 83 EVPVILV--GYSLGGRLIMHGLAQGAFSRLNLRGAIIEGGHFGLQEN-EEKAARWQHDQQWAQRFSQQPIEHVLSDWYQ- 158 (264)
T ss_dssp TSEEEEE--EETHHHHHHHHHHHHTTTTTSEEEEEEEESCCCCCCSH-HHHHHHHHHHHHHHHHHHHSCHHHHHHHHTT-
T ss_pred CCceEEE--EECHhHHHHHHHHHHHhhCccccceEEEecCCCCCCCh-hhhhhhhcccHHHHHHhccccHHHHHHHHhh-
Confidence 5 37777 67776 56777 778999999999988653321110 00000000 0000000000 0000011110
Q ss_pred CCCccccccccccccccccccCCchhHHHHHHHhcch---hhhhHhhhcCcCCCCCCCcEEEEEeCCCCCCCcchHHHHH
Q 022534 180 GSPYVLKLDKADVYRLPYLASSGPGFALLEAARKVNF---KDISSRIGAGFSSGSWDKPVLVAWGISDKYLPQSVAEEFQ 256 (295)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~ 256 (295)
..........................+......... .+....+ .++++|+|+|+|++|..++ .+.
T Consensus 159 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l------~~i~~P~lii~G~~D~~~~-----~~~ 226 (264)
T 1r3d_A 159 -QAVFSSLNHEQRQTLIAQRSANLGSSVAHMLLATSLAKQPYLLPAL------QALKLPIHYVCGEQDSKFQ-----QLA 226 (264)
T ss_dssp -SGGGTTCCHHHHHHHHHHHTTSCHHHHHHHHHHTCGGGCCCCHHHH------HTCSSCEEEEEETTCHHHH-----HHH
T ss_pred -hhhhhccCHHHHHHHHHHHhhcchHHHHHHHHhhhhccCccHHHHH------HhcCCCEEEEEECCCchHH-----HHH
Confidence 000000000000000000000001111111110000 0111111 2678999999999997542 233
Q ss_pred hcCCCCeEEEEecCCCCCCCCCChHHHHHHHHHHHHhc
Q 022534 257 KGNPNVVKLQMIEGAGHMPQEDWPEKVVDGLRYFFLNY 294 (295)
Q Consensus 257 ~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~ 294 (295)
+..+ .+++++++|||++++|+|++|++.|.+|+..+
T Consensus 227 ~~~~--~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~ 262 (264)
T 1r3d_A 227 ESSG--LSYSQVAQAGHNVHHEQPQAFAKIVQAMIHSI 262 (264)
T ss_dssp HHHC--SEEEEETTCCSCHHHHCHHHHHHHHHHHHHHH
T ss_pred HHhC--CcEEEcCCCCCchhhcCHHHHHHHHHHHHHHh
Confidence 3333 57999999999999999999999999999864
|
| >4g9e_A AHL-lactonase, alpha/beta hydrolase fold protein; AHL-binding; HET: C4L; 1.09A {Ochrobactrum} PDB: 4g5x_A* 4g8b_A* 4g8d_A 4g8c_A* 4g9g_A | Back alignment and structure |
|---|
Probab=99.97 E-value=2.6e-31 Score=225.34 Aligned_cols=260 Identities=16% Similarity=0.240 Sum_probs=164.7
Q ss_pred eeeEEeCcEEEEEEEcCCCCCCCceEEEEcCCCCCCccchhhHHHhhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCCHHH
Q 022534 13 GSYIKSGEYRWFVRETGSADSRLGTIVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTENE 92 (295)
Q Consensus 13 ~~~~~~~~~~~~~~~~g~~~~~~~~vv~lHG~~~~~~~w~~~~~~l~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~ 92 (295)
..++++++.+++|.+.++. +|+|||+||+++++..|..+++.|.+.||+|+++|+||||.|+.+... ...++.++
T Consensus 5 ~~~~~~~~~~~~~~~~~~~---~~~vv~lHG~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~--~~~~~~~~ 79 (279)
T 4g9e_A 5 YHELETSHGRIAVRESEGE---GAPLLMIHGNSSSGAIFAPQLEGEIGKKWRVIAPDLPGHGKSTDAIDP--DRSYSMEG 79 (279)
T ss_dssp EEEEEETTEEEEEEECCCC---EEEEEEECCTTCCGGGGHHHHHSHHHHHEEEEEECCTTSTTSCCCSCH--HHHSSHHH
T ss_pred EEEEEcCCceEEEEecCCC---CCeEEEECCCCCchhHHHHHHhHHHhcCCeEEeecCCCCCCCCCCCCc--ccCCCHHH
Confidence 4678888889999888742 469999999999999999999995445999999999999999975321 23568899
Q ss_pred HHHHHHHHHHHhCCCCceEEEEecccchH-HHHHHHHhCcCccceeEEEcCCCCCCCCCchhhhhh-hcccchhhhhhhH
Q 022534 93 FHEELDKLLDVLEVKYPFFLVVQGFLVGS-YGLTWALKNPSRISKLAILNSPLTASSPLPGLFQQL-RIPLLGEFTAQNA 170 (295)
Q Consensus 93 ~~~~l~~~~~~l~~~~~~~lv~~G~~~G~-~~~~~a~~~p~~v~~lil~~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 170 (295)
+++++.++++.++.++ ++++ |||+|+ +++.+|.++|+ +.+++++++|..........+... ........ ....
T Consensus 80 ~~~~~~~~~~~~~~~~-~~lv--G~S~Gg~~a~~~a~~~p~-~~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 154 (279)
T 4g9e_A 80 YADAMTEVMQQLGIAD-AVVF--GWSLGGHIGIEMIARYPE-MRGLMITGTPPVAREEVGQGFKSGPDMALAGQE-IFSE 154 (279)
T ss_dssp HHHHHHHHHHHHTCCC-CEEE--EETHHHHHHHHHTTTCTT-CCEEEEESCCCCCGGGHHHHBCCSTTGGGGGCS-CCCH
T ss_pred HHHHHHHHHHHhCCCc-eEEE--EECchHHHHHHHHhhCCc-ceeEEEecCCCCCCCccchhhccchhhhhcCcc-cccH
Confidence 9999999999998775 6666 677664 67888899998 888999877654321100000000 00000000 0000
Q ss_pred HHHHHHHHhCCCccccccccccccccccccCCch-hHHHHHHHhcchhhhhHhhhcCcCCCCCCCcEEEEEeCCCCCCCc
Q 022534 171 IMAERFIEAGSPYVLKLDKADVYRLPYLASSGPG-FALLEAARKVNFKDISSRIGAGFSSGSWDKPVLVAWGISDKYLPQ 249 (295)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~~~ 249 (295)
.....+.......... ...... ........ .............+....+ .++++|+|+|+|++|+++++
T Consensus 155 ~~~~~~~~~~~~~~~~---~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~i~~P~l~i~g~~D~~~~~ 224 (279)
T 4g9e_A 155 RDVESYARSTCGEPFE---ASLLDI-VARTDGRARRIMFEKFGSGTGGNQRDIV------AEAQLPIAVVNGRDEPFVEL 224 (279)
T ss_dssp HHHHHHHHHHHCSSCC---HHHHHH-HHHSCHHHHHHHHHHHHHTCBCCHHHHH------HHCCSCEEEEEETTCSSBCH
T ss_pred HHHHHHHHhhccCccc---HHHHHH-HHhhhccchHHHHHHhhccCCchHHHHH------HhcCCCEEEEEcCCCcccch
Confidence 0011111100000000 000000 00000000 0011111111111111111 15689999999999999999
Q ss_pred chHHHHH-hcCCCCeEEEEecCCCCCCCCCChHHHHHHHHHHHHh
Q 022534 250 SVAEEFQ-KGNPNVVKLQMIEGAGHMPQEDWPEKVVDGLRYFFLN 293 (295)
Q Consensus 250 ~~~~~~~-~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 293 (295)
+.+..+. +..++ +++++++++||++++|+|+++++.|.+||++
T Consensus 225 ~~~~~~~~~~~~~-~~~~~~~~~gH~~~~~~p~~~~~~i~~fl~~ 268 (279)
T 4g9e_A 225 DFVSKVKFGNLWE-GKTHVIDNAGHAPFREAPAEFDAYLARFIRD 268 (279)
T ss_dssp HHHTTCCCSSBGG-GSCEEETTCCSCHHHHSHHHHHHHHHHHHHH
T ss_pred HHHHHHhhccCCC-CeEEEECCCCcchHHhCHHHHHHHHHHHHHH
Confidence 8888777 56665 7999999999999999999999999999976
|
| >4dnp_A DAD2; alpha/beta hydrolase, hydrolase; 2.15A {Petunia hybrida} PDB: 4dnq_A | Back alignment and structure |
|---|
Probab=99.97 E-value=1.6e-30 Score=219.29 Aligned_cols=252 Identities=17% Similarity=0.212 Sum_probs=156.8
Q ss_pred EEEEEcCCCCCCCceEEEEcCCCCCCccchhhHHHhhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
Q 022534 23 WFVRETGSADSRLGTIVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEELDKLLD 102 (295)
Q Consensus 23 ~~~~~~g~~~~~~~~vv~lHG~~~~~~~w~~~~~~l~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~l~~~~~ 102 (295)
++|...|++ +|+|||+||+++++..|..+++.|++ ||+|+++|+||||.|+.+.... ...++++++++++.++++
T Consensus 11 l~~~~~g~~---~p~vv~~HG~~~~~~~~~~~~~~l~~-g~~v~~~D~~G~G~S~~~~~~~-~~~~~~~~~~~~~~~~~~ 85 (269)
T 4dnp_A 11 LNVRVVGSG---ERVLVLAHGFGTDQSAWNRILPFFLR-DYRVVLYDLVCAGSVNPDFFDF-RRYTTLDPYVDDLLHILD 85 (269)
T ss_dssp TTCEEECSC---SSEEEEECCTTCCGGGGTTTGGGGTT-TCEEEEECCTTSTTSCGGGCCT-TTCSSSHHHHHHHHHHHH
T ss_pred hhhhhcCCC---CCEEEEEeCCCCcHHHHHHHHHHHhC-CcEEEEEcCCCCCCCCCCCCCc-cccCcHHHHHHHHHHHHH
Confidence 455666753 46999999999999999999999987 9999999999999997622111 112378999999999999
Q ss_pred HhCCCCceEEEEecccchH-HHHHHHHhCcCccceeEEEcCCCCCCCC--Cchhhhhhhc-ccchhhhhhhHHHHHHHHH
Q 022534 103 VLEVKYPFFLVVQGFLVGS-YGLTWALKNPSRISKLAILNSPLTASSP--LPGLFQQLRI-PLLGEFTAQNAIMAERFIE 178 (295)
Q Consensus 103 ~l~~~~~~~lv~~G~~~G~-~~~~~a~~~p~~v~~lil~~~p~~~~~~--~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 178 (295)
.++.++ ++++ |||+|+ +++.+|.++|++|+++++++++...... +...+..... ................+..
T Consensus 86 ~~~~~~-~~l~--GhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (269)
T 4dnp_A 86 ALGIDC-CAYV--GHSVSAMIGILASIRRPELFSKLILIGASPRFLNDEDYHGGFEQGEIEKVFSAMEANYEAWVNGFAP 162 (269)
T ss_dssp HTTCCS-EEEE--EETHHHHHHHHHHHHCTTTEEEEEEESCCSCCBCBTTBCCSBCHHHHHHHHHHHHHCHHHHHHHHHH
T ss_pred hcCCCe-EEEE--ccCHHHHHHHHHHHhCcHhhceeEEeCCCCCCCChHHhccccchHHHHHHHHhccccHHHHHHHhhh
Confidence 998774 6776 677764 6788899999999999999754322110 1100000000 0000000000000001110
Q ss_pred hCCCccccccccccccccccccCCch--hHHHHHHHhcchhhhhHhhhcCcCCCCCCCcEEEEEeCCCCCCCcchHHHHH
Q 022534 179 AGSPYVLKLDKADVYRLPYLASSGPG--FALLEAARKVNFKDISSRIGAGFSSGSWDKPVLVAWGISDKYLPQSVAEEFQ 256 (295)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~ 256 (295)
....... ......+...+ ....+. ..........+... . .+++++|+++|+|++|.+++++.+..+.
T Consensus 163 ~~~~~~~-~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~---~------~~~i~~P~l~i~g~~D~~~~~~~~~~~~ 231 (269)
T 4dnp_A 163 LAVGADV-PAAVREFSRTL-FNMRPDITLFVSRTVFNSDMRG---V------LGLVKVPCHIFQTARDHSVPASVATYLK 231 (269)
T ss_dssp HHHCSSC-HHHHHHHHHHH-HHSCHHHHHHHHHHHHTCCCGG---G------GGGCCSCEEEEEEESBTTBCHHHHHHHH
T ss_pred hhccCCC-hhHHHHHHHHH-HccCcchhhhHhhhhcchhhHh---h------hccccCCEEEEecCCCcccCHHHHHHHH
Confidence 0000000 00000000000 000000 00111111111111 1 1256899999999999999999999999
Q ss_pred hcCCCCeEEEEecCCCCCCCCCChHHHHHHHHHHHHh
Q 022534 257 KGNPNVVKLQMIEGAGHMPQEDWPEKVVDGLRYFFLN 293 (295)
Q Consensus 257 ~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 293 (295)
+.+++.+++++++++||++++|+|+++++.|.+||..
T Consensus 232 ~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~i~~fl~~ 268 (269)
T 4dnp_A 232 NHLGGKNTVHWLNIEGHLPHLSAPTLLAQELRRALSH 268 (269)
T ss_dssp HHSSSCEEEEEEEEESSCHHHHCHHHHHHHHHHHHC-
T ss_pred HhCCCCceEEEeCCCCCCccccCHHHHHHHHHHHHhh
Confidence 9998757999999999999999999999999999964
|
| >1wm1_A Proline iminopeptidase; complex with inhibitor, hydrolase; HET: PTB; 2.10A {Serratia marcescens} SCOP: c.69.1.7 PDB: 1qtr_A* 1x2b_A* 1x2e_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=2.8e-29 Score=218.18 Aligned_cols=261 Identities=18% Similarity=0.260 Sum_probs=155.4
Q ss_pred eeeEEe-CcEEEEEEEcCCCCCCCceEEEEcCCCCCCccchhhHHHhhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCCHH
Q 022534 13 GSYIKS-GEYRWFVRETGSADSRLGTIVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTEN 91 (295)
Q Consensus 13 ~~~~~~-~~~~~~~~~~g~~~~~~~~vv~lHG~~~~~~~w~~~~~~l~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~ 91 (295)
..++++ +|.+++|.+.|+++ .++|||+||+++++. |..+...+...+|+||++|+||||+|+.+.. ...|+.+
T Consensus 16 ~~~~~~~~g~~l~~~~~g~~~--g~~vvllHG~~~~~~-~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~---~~~~~~~ 89 (317)
T 1wm1_A 16 SGWLDTGDGHRIYWELSGNPN--GKPAVFIHGGPGGGI-SPHHRQLFDPERYKVLLFDQRGCGRSRPHAS---LDNNTTW 89 (317)
T ss_dssp EEEEECSSSCEEEEEEEECTT--SEEEEEECCTTTCCC-CGGGGGGSCTTTEEEEEECCTTSTTCBSTTC---CTTCSHH
T ss_pred eeEEEcCCCcEEEEEEcCCCC--CCcEEEECCCCCccc-chhhhhhccccCCeEEEECCCCCCCCCCCcc---cccccHH
Confidence 567777 78999999988643 358999999987653 3333444544589999999999999986432 1246789
Q ss_pred HHHHHHHHHHHHhCCCCceEEEEecccch-HHHHHHHHhCcCccceeEEEcCCCCCCCC------------Cchhhhhhh
Q 022534 92 EFHEELDKLLDVLEVKYPFFLVVQGFLVG-SYGLTWALKNPSRISKLAILNSPLTASSP------------LPGLFQQLR 158 (295)
Q Consensus 92 ~~~~~l~~~~~~l~~~~~~~lv~~G~~~G-~~~~~~a~~~p~~v~~lil~~~p~~~~~~------------~~~~~~~~~ 158 (295)
++++|+.++++++++++ ++|+ |||+| .+++.+|+++|++|+++|++++....... .+..+..+.
T Consensus 90 ~~~~dl~~l~~~l~~~~-~~lv--GhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (317)
T 1wm1_A 90 HLVADIERLREMAGVEQ-WLVF--GGSWGSTLALAYAQTHPERVSEMVLRGIFTLRKQRLHWYYQDGASRFFPEKWERVL 166 (317)
T ss_dssp HHHHHHHHHHHHTTCSS-EEEE--EETHHHHHHHHHHHHCGGGEEEEEEESCCCCCHHHHHHHHTSSGGGTSHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCc-EEEE--EeCHHHHHHHHHHHHCChheeeeeEeccCCCchhhhhHHhhccchhhcHHHHHHHH
Confidence 99999999999999885 6666 77776 56889999999999999998643211000 000000000
Q ss_pred cccchhhhhhhHHHHHHHHHh-CCC-cccccc-cc-------ccccc-cccc---cCCchhHH-HHHH-----Hhcchh-
Q 022534 159 IPLLGEFTAQNAIMAERFIEA-GSP-YVLKLD-KA-------DVYRL-PYLA---SSGPGFAL-LEAA-----RKVNFK- 217 (295)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~-~~-------~~~~~-~~~~---~~~~~~~~-~~~~-----~~~~~~- 217 (295)
.. .... .... ....+... ... ...... .. ..... +... ...+.... .... ....+.
T Consensus 167 ~~-~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (317)
T 1wm1_A 167 SI-LSDD-ERKD-VIAAYRQRLTSADPQVQLEAAKLWSVWEGETVTLLPSRESASFGEDDFALAFARIENHYFTHLGFLE 243 (317)
T ss_dssp TT-SCTT-GGGC-HHHHHHHHHTCSCHHHHHHHHHHHHHHHHTTSSSSCCGGGGGGGCHHHHHHHHHHHHHHHHTGGGCS
T ss_pred hh-ccch-hhcc-hHHHHHhhhcCCCccccccccccccccccchhhccCCcccccccccchhhhHHHhhhhhhhcccccc
Confidence 00 0000 0000 00000000 000 000000 00 00000 0000 00011100 0000 000000
Q ss_pred --h-hhHhhhcCcCCCCC-CCcEEEEEeCCCCCCCcchHHHHHhcCCCCeEEEEecCCCCCCCCC-ChHHHHHHHHHHHH
Q 022534 218 --D-ISSRIGAGFSSGSW-DKPVLVAWGISDKYLPQSVAEEFQKGNPNVVKLQMIEGAGHMPQED-WPEKVVDGLRYFFL 292 (295)
Q Consensus 218 --~-~~~~~~~~~~~~~~-~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e-~p~~~~~~i~~fl~ 292 (295)
+ ....+ .++ ++|+|+|+|++|.+++++.+..+++.+|+ ++++++++|||+++.+ .++++.+.|.+|+.
T Consensus 244 ~~~~~~~~~------~~i~~~P~lii~G~~D~~~~~~~~~~l~~~~p~-~~~~~i~~~gH~~~~~~~~~~~~~~i~~f~~ 316 (317)
T 1wm1_A 244 SDDQLLRNV------PLIRHIPAVIVHGRYDMACQVQNAWDLAKAWPE-AELHIVEGAGHSYDEPGILHQLMIATDRFAG 316 (317)
T ss_dssp STTHHHHTG------GGGTTSCEEEEEETTCSSSCHHHHHHHHHHCTT-SEEEEETTCCSSTTSHHHHHHHHHHHHHHTC
T ss_pred cchhhHhhc------ccccCCCEEEEEecCCCCCCHHHHHHHHhhCCC-ceEEEECCCCCCCCCcchHHHHHHHHHHHhc
Confidence 0 11111 245 49999999999999999989999999997 7999999999999775 68999999999975
|
| >2r11_A Carboxylesterase NP; 2632844, putative hydrolase, structural genomics, joint center for structural genomics, JCSG; HET: MSE PGE; 1.96A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=99.97 E-value=9.3e-30 Score=220.54 Aligned_cols=258 Identities=19% Similarity=0.196 Sum_probs=165.4
Q ss_pred ccceeeEEeCcEEEEEEEcCCCCCCCceEEEEcCCCCCCccchhhHHHhhhCCCeEEEeCCCCC-CCCCCCCCCCCCCCC
Q 022534 10 REYGSYIKSGEYRWFVRETGSADSRLGTIVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGF-GFSDKPEKGYDDFDF 88 (295)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~vv~lHG~~~~~~~w~~~~~~l~~~~~~via~Dl~G~-G~S~~~~~~~~~~~~ 88 (295)
+....++++++.+++|...|+++ +|+|||+||+++++..|..+++.|++ ||+|+++|+||| |.|+.+.. .+
T Consensus 44 ~~~~~~v~~~~~~~~~~~~g~~~--~~~vv~lHG~~~~~~~~~~~~~~L~~-g~~vi~~D~~G~gG~s~~~~~-----~~ 115 (306)
T 2r11_A 44 RCKSFYISTRFGQTHVIASGPED--APPLVLLHGALFSSTMWYPNIADWSS-KYRTYAVDIIGDKNKSIPENV-----SG 115 (306)
T ss_dssp CCEEEEECCTTEEEEEEEESCTT--SCEEEEECCTTTCGGGGTTTHHHHHH-HSEEEEECCTTSSSSCEECSC-----CC
T ss_pred CcceEEEecCCceEEEEeeCCCC--CCeEEEECCCCCCHHHHHHHHHHHhc-CCEEEEecCCCCCCCCCCCCC-----CC
Confidence 34567888899999998888643 47999999999999999999999987 899999999999 88886432 35
Q ss_pred CHHHHHHHHHHHHHHhCCCCceEEEEecccch-HHHHHHHHhCcCccceeEEEcCCCCCCCCCchhhhhhhcccchhhhh
Q 022534 89 TENEFHEELDKLLDVLEVKYPFFLVVQGFLVG-SYGLTWALKNPSRISKLAILNSPLTASSPLPGLFQQLRIPLLGEFTA 167 (295)
Q Consensus 89 ~~~~~~~~l~~~~~~l~~~~~~~lv~~G~~~G-~~~~~~a~~~p~~v~~lil~~~p~~~~~~~~~~~~~~~~~~~~~~~~ 167 (295)
+.+++++++.++++.++.++ ++++ |||+| .+++.+|.++|++|+++|+++++............. ..+......
T Consensus 116 ~~~~~~~~l~~~l~~l~~~~-~~lv--G~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~-~~~~~~~~~- 190 (306)
T 2r11_A 116 TRTDYANWLLDVFDNLGIEK-SHMI--GLSLGGLHTMNFLLRMPERVKSAAILSPAETFLPFHHDFYKY-ALGLTASNG- 190 (306)
T ss_dssp CHHHHHHHHHHHHHHTTCSS-EEEE--EETHHHHHHHHHHHHCGGGEEEEEEESCSSBTSCCCHHHHHH-HHTTTSTTH-
T ss_pred CHHHHHHHHHHHHHhcCCCc-eeEE--EECHHHHHHHHHHHhCccceeeEEEEcCccccCcccHHHHHH-HhHHHHHHH-
Confidence 78999999999999999874 6676 67765 578889999999999999997554332211111111 011000000
Q ss_pred hhHHHHHHHHHhCCCcccccc--ccccccccccccCCchhHHHHHHHhcchhhhhHhhhcCcCCCCCCCcEEEEEeCCCC
Q 022534 168 QNAIMAERFIEAGSPYVLKLD--KADVYRLPYLASSGPGFALLEAARKVNFKDISSRIGAGFSSGSWDKPVLVAWGISDK 245 (295)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~ 245 (295)
... ...+...... ..... ..+......... ...+.. .............+ .++++|+|+|+|++|.
T Consensus 191 -~~~-~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~-~~~~~~--~~~~~~~~~~~~~l------~~i~~P~lii~G~~D~ 258 (306)
T 2r11_A 191 -VET-FLNWMMNDQN-VLHPIFVKQFKAGVMWQDG-SRNPNP--NADGFPYVFTDEEL------RSARVPILLLLGEHEV 258 (306)
T ss_dssp -HHH-HHHHHTTTCC-CSCHHHHHHHHHHHHCCSS-SCCCCC--CTTSSSCBCCHHHH------HTCCSCEEEEEETTCC
T ss_pred -HHH-HHHHhhCCcc-ccccccccccHHHHHHHHh-hhhhhh--hccCCCCCCCHHHH------hcCCCCEEEEEeCCCc
Confidence 000 0111111000 00000 000000000000 000000 00000000001111 2678999999999999
Q ss_pred CCCcchHHHH-HhcCCCCeEEEEecCCCCCCCCCChHHHHHHHHHHHHh
Q 022534 246 YLPQSVAEEF-QKGNPNVVKLQMIEGAGHMPQEDWPEKVVDGLRYFFLN 293 (295)
Q Consensus 246 ~~~~~~~~~~-~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 293 (295)
+++++.+.++ .+..++ +++++++++||++++|+|+++++.|.+||.+
T Consensus 259 ~~~~~~~~~~~~~~~~~-~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~ 306 (306)
T 2r11_A 259 IYDPHSALHRASSFVPD-IEAEVIKNAGHVLSMEQPTYVNERVMRFFNA 306 (306)
T ss_dssp SSCHHHHHHHHHHHSTT-CEEEEETTCCTTHHHHSHHHHHHHHHHHHC-
T ss_pred ccCHHHHHHHHHHHCCC-CEEEEeCCCCCCCcccCHHHHHHHHHHHHhC
Confidence 9998877754 456776 7999999999999999999999999999863
|
| >3pe6_A Monoglyceride lipase; alpha-beta hydrolase fold, 2-arachidonyl-glycerol, M associated, hydrolase, hydrolase-hydrolase inhibitor comple; HET: ZYH; 1.35A {Homo sapiens} PDB: 3jw8_A 3jwe_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=1.6e-28 Score=210.04 Aligned_cols=258 Identities=18% Similarity=0.255 Sum_probs=166.2
Q ss_pred ccccceeeEEeCcEEEEEEEcCCCCCCCceEEEEcCCCCCCccchhhHHHhhhCCCeEEEeCCCCCCCCCCCCCCCCCCC
Q 022534 8 KGREYGSYIKSGEYRWFVRETGSADSRLGTIVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFD 87 (295)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~vv~lHG~~~~~~~w~~~~~~l~~~~~~via~Dl~G~G~S~~~~~~~~~~~ 87 (295)
...+...+++.+|.+++|..+++.++++|+|||+||++++...|..+++.|+++||+|+++|+||||.|+.+... .
T Consensus 15 ~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~----~ 90 (303)
T 3pe6_A 15 PYQDLPHLVNADGQYLFCRYWAPTGTPKALIFVSHGAGEHSGRYEELARMLMGLDLLVFAHDHVGHGQSEGERMV----V 90 (303)
T ss_dssp BGGGSCEEECTTSCEEEEEEECCSSCCSEEEEEECCTTCCGGGGHHHHHHHHHTTEEEEEECCTTSTTSCSSTTC----C
T ss_pred ccCCCCeEecCCCeEEEEEEeccCCCCCeEEEEECCCCchhhHHHHHHHHHHhCCCcEEEeCCCCCCCCCCCCCC----C
Confidence 344556888889999999998876555789999999999999999999999988999999999999999965322 2
Q ss_pred CCHHHHHHHHHHHHHHhCCC---CceEEEEecccch-HHHHHHHHhCcCccceeEEEcCCCCCCCCCchhhhhhhcccch
Q 022534 88 FTENEFHEELDKLLDVLEVK---YPFFLVVQGFLVG-SYGLTWALKNPSRISKLAILNSPLTASSPLPGLFQQLRIPLLG 163 (295)
Q Consensus 88 ~~~~~~~~~l~~~~~~l~~~---~~~~lv~~G~~~G-~~~~~~a~~~p~~v~~lil~~~p~~~~~~~~~~~~~~~~~~~~ 163 (295)
++.+++++|+.++++.+..+ ++++++ |||+| .+++.+|.++|++|+++++++++..............
T Consensus 91 ~~~~~~~~d~~~~l~~l~~~~~~~~~~l~--G~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~------ 162 (303)
T 3pe6_A 91 SDFHVFVRDVLQHVDSMQKDYPGLPVFLL--GHSMGGAIAILTAAERPGHFAGMVLISPLVLANPESATTFKVL------ 162 (303)
T ss_dssp SSTHHHHHHHHHHHHHHHHHSTTCCEEEE--EETHHHHHHHHHHHHSTTTCSEEEEESCSSSBCHHHHHHHHHH------
T ss_pred CCHHHHHHHHHHHHHHHhhccCCceEEEE--EeCHHHHHHHHHHHhCcccccEEEEECccccCchhccHHHHHH------
Confidence 46678899999998887533 357777 67766 4688889999999999999965433211000000000
Q ss_pred hhhhhhHHHHHHHHHhCCCccc---------ccccc--ccc-cccccccCCchhHHHHHHHhcchhhhhHhhhcCcCCCC
Q 022534 164 EFTAQNAIMAERFIEAGSPYVL---------KLDKA--DVY-RLPYLASSGPGFALLEAARKVNFKDISSRIGAGFSSGS 231 (295)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~---------~~~~~--~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (295)
...+.....+... ..... ..+ ..+..........+..... ....+....+ .+
T Consensus 163 ---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~------~~ 226 (303)
T 3pe6_A 163 ---------AAKVLNSVLPNLSSGPIDSSVLSRNKTEVDIYNSDPLICRAGLKVCFGIQLL-NAVSRVERAL------PK 226 (303)
T ss_dssp ---------HHHHHHTTCCSCCCCCCCGGGTCSCHHHHHHHHTCTTSCCSCCCHHHHHHHH-HHHHHHHHHG------GG
T ss_pred ---------HHHHHHHhcccccCCccchhhhhcchhHHHHhccCccccccchhhhhHHHHH-HHHHHHHHHh------hc
Confidence 0000000000000 00000 000 0000000000011100000 0001111111 25
Q ss_pred CCCcEEEEEeCCCCCCCcchHHHHHhcCCC-CeEEEEecCCCCCCCCCChHHHHHH---HHHHHHh
Q 022534 232 WDKPVLVAWGISDKYLPQSVAEEFQKGNPN-VVKLQMIEGAGHMPQEDWPEKVVDG---LRYFFLN 293 (295)
Q Consensus 232 ~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~-~~~~~~i~~~gH~~~~e~p~~~~~~---i~~fl~~ 293 (295)
+++|+|+|+|++|.+++.+.+..+.+.++. ++++++++++||.+++|+|+++.+. +.+||..
T Consensus 227 i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~~~~~~~~l~~ 292 (303)
T 3pe6_A 227 LTVPFLLLQGSADRLCDSKGAYLLMELAKSQDKTLKIYEGAYHVLHKELPEVTNSVFHEINMWVSQ 292 (303)
T ss_dssp CCSCEEEEEETTCSSBCHHHHHHHHHHCCCSSEEEEEETTCCSCGGGSCHHHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeeCCCCCCChHHHHHHHHhcccCCceEEEeCCCccceeccchHHHHHHHHHHHHHHhc
Confidence 789999999999999999999999988873 3799999999999999999877666 5555543
|
| >3kxp_A Alpha-(N-acetylaminomethylene)succinic acid hydrolase; alpha/beta hydrolase, PLP degradation, E-2- (acetamidomethylene)succinate; 2.26A {Mesorhizobium loti} | Back alignment and structure |
|---|
Probab=99.97 E-value=2.3e-29 Score=218.41 Aligned_cols=260 Identities=21% Similarity=0.286 Sum_probs=167.9
Q ss_pred ccceeeEEeCcEEEEEEEcCCCCCCCceEEEEcCCCCCCccchhhHHHhhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCC
Q 022534 10 REYGSYIKSGEYRWFVRETGSADSRLGTIVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFT 89 (295)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~vv~lHG~~~~~~~w~~~~~~l~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~ 89 (295)
+....+++.+|..++|...|+ +|+||++||++++...|..+++.|++ +|+|+++|+||||.|+.+.. .++
T Consensus 47 ~~~~~~~~~~~~~~~~~~~g~----~p~vv~lhG~~~~~~~~~~~~~~L~~-~~~v~~~D~~G~G~S~~~~~-----~~~ 116 (314)
T 3kxp_A 47 HFISRRVDIGRITLNVREKGS----GPLMLFFHGITSNSAVFEPLMIRLSD-RFTTIAVDQRGHGLSDKPET-----GYE 116 (314)
T ss_dssp CCEEEEEECSSCEEEEEEECC----SSEEEEECCTTCCGGGGHHHHHTTTT-TSEEEEECCTTSTTSCCCSS-----CCS
T ss_pred CcceeeEEECCEEEEEEecCC----CCEEEEECCCCCCHHHHHHHHHHHHc-CCeEEEEeCCCcCCCCCCCC-----CCC
Confidence 345678888999999998876 36999999999999999999999987 79999999999999985432 457
Q ss_pred HHHHHHHHHHHHHHhCCCCceEEEEecccch-HHHHHHHHhCcCccceeEEEcCCCCCCCCCchhhhhhhcccchhhhhh
Q 022534 90 ENEFHEELDKLLDVLEVKYPFFLVVQGFLVG-SYGLTWALKNPSRISKLAILNSPLTASSPLPGLFQQLRIPLLGEFTAQ 168 (295)
Q Consensus 90 ~~~~~~~l~~~~~~l~~~~~~~lv~~G~~~G-~~~~~~a~~~p~~v~~lil~~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (295)
.+++++++.+++++++.+ +++++ |||+| .+++.+|.++|++|+++++++++.....................+..
T Consensus 117 ~~~~~~dl~~~l~~l~~~-~v~lv--G~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 192 (314)
T 3kxp_A 117 ANDYADDIAGLIRTLARG-HAILV--GHSLGARNSVTAAAKYPDLVRSVVAIDFTPYIETEALDALEARVNAGSQLFED- 192 (314)
T ss_dssp HHHHHHHHHHHHHHHTSS-CEEEE--EETHHHHHHHHHHHHCGGGEEEEEEESCCTTCCHHHHHHHHHHTTTTCSCBSS-
T ss_pred HHHHHHHHHHHHHHhCCC-CcEEE--EECchHHHHHHHHHhChhheeEEEEeCCCCCCCcchhhHHHHHhhhchhhhcC-
Confidence 899999999999999876 46776 66765 57888999999999999998654322110000000000000000000
Q ss_pred hHHHHHHHHHhCCCccccccc----ccccc---ccccccCCchhHHHHHHHhcchhhhhHhhhcCcCCCCCCCcEEEEEe
Q 022534 169 NAIMAERFIEAGSPYVLKLDK----ADVYR---LPYLASSGPGFALLEAARKVNFKDISSRIGAGFSSGSWDKPVLVAWG 241 (295)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~----~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G 241 (295)
..... .+.....+....... ..... ..+.....+. ...........+....+ .++++|+|+|+|
T Consensus 193 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~------~~i~~P~Lii~G 263 (314)
T 3kxp_A 193 IKAVE-AYLAGRYPNIPADAIRIRAESGYQPVDGGLRPLASSA--AMAQTARGLRSDLVPAY------RDVTKPVLIVRG 263 (314)
T ss_dssp HHHHH-HHHHHHSTTSCHHHHHHHHHHSEEEETTEEEESSCHH--HHHHHHHHTTSCCHHHH------HHCCSCEEEEEE
T ss_pred HHHHH-HHHHhhcccCchHHHHHHhhhhhcccccccccccChh--hhhhhccccCcchhhHh------hcCCCCEEEEec
Confidence 00000 000000000000000 00000 0000000000 00000000000111222 156899999999
Q ss_pred CCCCCCCcchHHHHHhcCCCCeEEEEecCCCCCCCCCChHHHHHHHHHHHHh
Q 022534 242 ISDKYLPQSVAEEFQKGNPNVVKLQMIEGAGHMPQEDWPEKVVDGLRYFFLN 293 (295)
Q Consensus 242 ~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 293 (295)
++|++++++.+.++.+.+++ +++++++++||+++.|+|+++++.|.+||+.
T Consensus 264 ~~D~~~~~~~~~~~~~~~~~-~~~~~~~g~gH~~~~e~~~~~~~~i~~fl~~ 314 (314)
T 3kxp_A 264 ESSKLVSAAALAKTSRLRPD-LPVVVVPGADHYVNEVSPEITLKAITNFIDA 314 (314)
T ss_dssp TTCSSSCHHHHHHHHHHCTT-SCEEEETTCCSCHHHHCHHHHHHHHHHHHHC
T ss_pred CCCccCCHHHHHHHHHhCCC-ceEEEcCCCCCcchhhCHHHHHHHHHHHHhC
Confidence 99999999999999999987 7999999999999999999999999999963
|
| >2pl5_A Homoserine O-acetyltransferase; alpha/beta hydrolase superfa transferase; 2.20A {Leptospira interrogans} SCOP: c.69.1.40 | Back alignment and structure |
|---|
Probab=99.97 E-value=5.8e-29 Score=220.10 Aligned_cols=269 Identities=14% Similarity=0.154 Sum_probs=164.6
Q ss_pred eEEeCcEEEEEEEcCCCCC-CCceEEEEcCCCCCCc-------------cchhhHH---HhhhCCCeEEEeCCCC--CCC
Q 022534 15 YIKSGEYRWFVRETGSADS-RLGTIVFLHGAPSHSY-------------SYRNVMS---QMSDAGFHCFAPDWLG--FGF 75 (295)
Q Consensus 15 ~~~~~~~~~~~~~~g~~~~-~~~~vv~lHG~~~~~~-------------~w~~~~~---~l~~~~~~via~Dl~G--~G~ 75 (295)
..+.+|.+++|.+.|++++ .+|+|||+||+++++. .|..+++ .|.+.||+|+++|+|| ||.
T Consensus 25 g~~~~g~~l~y~~~g~~~~~~~~~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~vi~~D~~G~~~G~ 104 (366)
T 2pl5_A 25 GSVLSPVVIAYETYGTLSSSKNNAILICHALSGDAHAAGYHSGSDKKPGWWDDYIGPGKSFDTNQYFIICSNVIGGCKGS 104 (366)
T ss_dssp SCEESSEEEEEEEEECCCTTSCCEEEEECCSSCCSCCSSBSSTTCSSCCTTTTTEETTSSEETTTCEEEEECCTTCSSSS
T ss_pred CccccCceeeEEeccCcCCCCCceEEEecccCCcccccccccccccccchHHhhcCCcccccccccEEEEecCCCcccCC
Confidence 3456788999999987532 2479999999999888 7888885 4544689999999999 899
Q ss_pred CCCCCCCCC---C-----CCCCHHHHHHHHHHHHHHhCCCCceEEEEecccch-HHHHHHHHhCcCccceeEEEcCCCCC
Q 022534 76 SDKPEKGYD---D-----FDFTENEFHEELDKLLDVLEVKYPFFLVVQGFLVG-SYGLTWALKNPSRISKLAILNSPLTA 146 (295)
Q Consensus 76 S~~~~~~~~---~-----~~~~~~~~~~~l~~~~~~l~~~~~~~lv~~G~~~G-~~~~~~a~~~p~~v~~lil~~~p~~~ 146 (295)
|+....... . ..|+++++++++.+++++++.++.++++ |||+| .+++.+|.++|++|+++|+++++...
T Consensus 105 s~~~~~~~~~~~~~~~~~~~~~~~~~~~dl~~~l~~l~~~~~~~lv--GhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~ 182 (366)
T 2pl5_A 105 SGPLSIHPETSTPYGSRFPFVSIQDMVKAQKLLVESLGIEKLFCVA--GGSMGGMQALEWSIAYPNSLSNCIVMASTAEH 182 (366)
T ss_dssp SSTTSBCTTTSSBCGGGSCCCCHHHHHHHHHHHHHHTTCSSEEEEE--EETHHHHHHHHHHHHSTTSEEEEEEESCCSBC
T ss_pred CCCCCCCCCCCccccCCCCcccHHHHHHHHHHHHHHcCCceEEEEE--EeCccHHHHHHHHHhCcHhhhheeEeccCccC
Confidence 875321110 0 0468999999999999999887632566 77766 56888999999999999999764432
Q ss_pred CCCCchhhhh-----h-hcc-c---------chh-h---------hhhhHHHHHHHHHhCCCcc---c-cccccccccc-
Q 022534 147 SSPLPGLFQQ-----L-RIP-L---------LGE-F---------TAQNAIMAERFIEAGSPYV---L-KLDKADVYRL- 195 (295)
Q Consensus 147 ~~~~~~~~~~-----~-~~~-~---------~~~-~---------~~~~~~~~~~~~~~~~~~~---~-~~~~~~~~~~- 195 (295)
.. ....+.. + ..+ + ... . ..........++....... . ........+.
T Consensus 183 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (366)
T 2pl5_A 183 SA-MQIAFNEVGRQAILSDPNWKNGLYDENSPRKGLALARMVGHITYLSDDKMREKFGRNPPRGNILSTDFAVGSYLIYQ 261 (366)
T ss_dssp CH-HHHHHHHHHHHHHHTSTTCGGGTCSSSCCHHHHHHHHHHHHHTTBCHHHHHHHHTTSCCSSCTTTTTTTSCGGGGST
T ss_pred CC-ccchhhHHHHHHHHhCcccccccccccccccchHHHHHhhccccCCHHHHHHHhhhhhhcccccchhhhHHHHHHHH
Confidence 11 0000000 0 000 0 000 0 0000000011111100000 0 0000000000
Q ss_pred --cccccCCc-hh-HHHHHHHhcchh---hhhHhhhcCcCCCCCCCcEEEEEeCCCCCCCcchHHHHHhcCC----CCeE
Q 022534 196 --PYLASSGP-GF-ALLEAARKVNFK---DISSRIGAGFSSGSWDKPVLVAWGISDKYLPQSVAEEFQKGNP----NVVK 264 (295)
Q Consensus 196 --~~~~~~~~-~~-~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~~----~~~~ 264 (295)
.+.....+ .. .........+.. +....+ .++++|+|+|+|++|.+++++.+..+.+.++ + ++
T Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l------~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~-~~ 334 (366)
T 2pl5_A 262 GESFVDRFDANSYIYVTKALDHYSLGKGKELTAAL------SNATCRFLVVSYSSDWLYPPAQSREIVKSLEAADKR-VF 334 (366)
T ss_dssp TCCSSSCCCHHHHHHHHHHHHHCBCCSHHHHHHHH------TTCCSEEEEEEETTCCSSCHHHHHHHHHHHHHTTCC-EE
T ss_pred HHhhhcccChhHHHHHHhhhhhhccccccchhhhh------ccCCCCEEEEecCCCcccCHHHHHHHHHHhhhcccC-eE
Confidence 00000011 11 111111111111 011111 3678999999999999999999999988887 5 79
Q ss_pred EEEe-cCCCCCCCCCChHHHHHHHHHHHHh
Q 022534 265 LQMI-EGAGHMPQEDWPEKVVDGLRYFFLN 293 (295)
Q Consensus 265 ~~~i-~~~gH~~~~e~p~~~~~~i~~fl~~ 293 (295)
++++ +++||++++|+|+++++.|.+||.+
T Consensus 335 ~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~ 364 (366)
T 2pl5_A 335 YVELQSGEGHDSFLLKNPKQIEILKGFLEN 364 (366)
T ss_dssp EEEECCCBSSGGGGSCCHHHHHHHHHHHHC
T ss_pred EEEeCCCCCcchhhcChhHHHHHHHHHHcc
Confidence 9999 8999999999999999999999975
|
| >3hju_A Monoglyceride lipase; alpha/beta hydrolase, hydrolase, serine esterase; 2.20A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.96 E-value=1.1e-28 Score=216.42 Aligned_cols=262 Identities=18% Similarity=0.239 Sum_probs=167.5
Q ss_pred ccccceeeEEeCcEEEEEEEcCCCCCCCceEEEEcCCCCCCccchhhHHHhhhCCCeEEEeCCCCCCCCCCCCCCCCCCC
Q 022534 8 KGREYGSYIKSGEYRWFVRETGSADSRLGTIVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFD 87 (295)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~vv~lHG~~~~~~~w~~~~~~l~~~~~~via~Dl~G~G~S~~~~~~~~~~~ 87 (295)
.+.++..+++.+|.+++|..+++..+++|+|||+||++++...|..+++.|+++||+|+++|+||||.|+.+... .
T Consensus 33 ~~~~~~~~~~~dg~~l~~~~~~p~~~~~p~vv~~HG~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~----~ 108 (342)
T 3hju_A 33 PYQDLPHLVNADGQYLFCRYWKPTGTPKALIFVSHGAGEHSGRYEELARMLMGLDLLVFAHDHVGHGQSEGERMV----V 108 (342)
T ss_dssp BTTSSCEEECTTSCEEEEEEECCSSCCSEEEEEECCTTCCGGGGHHHHHHHHTTTEEEEEECCTTSTTSCSSTTC----C
T ss_pred ccccCceEEccCCeEEEEEEeCCCCCCCcEEEEECCCCcccchHHHHHHHHHhCCCeEEEEcCCCCcCCCCcCCC----c
Confidence 344556788889999999998766556789999999999999999999999987999999999999999975422 3
Q ss_pred CCHHHHHHHHHHHHHHhCCC---CceEEEEecccch-HHHHHHHHhCcCccceeEEEcCCCCCCCCCchhhhhhhcccch
Q 022534 88 FTENEFHEELDKLLDVLEVK---YPFFLVVQGFLVG-SYGLTWALKNPSRISKLAILNSPLTASSPLPGLFQQLRIPLLG 163 (295)
Q Consensus 88 ~~~~~~~~~l~~~~~~l~~~---~~~~lv~~G~~~G-~~~~~~a~~~p~~v~~lil~~~p~~~~~~~~~~~~~~~~~~~~ 163 (295)
++.+++++|+.++++.+..+ .+++++ |||+| .+++.+|.++|++|+++++++++................
T Consensus 109 ~~~~~~~~d~~~~l~~l~~~~~~~~v~l~--G~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~---- 182 (342)
T 3hju_A 109 SDFHVFVRDVLQHVDSMQKDYPGLPVFLL--GHSMGGAIAILTAAERPGHFAGMVLISPLVLANPESATTFKVLAA---- 182 (342)
T ss_dssp SCTHHHHHHHHHHHHHHHHHSTTCCEEEE--EETHHHHHHHHHHHHSTTTCSEEEEESCCCSCCTTTTSHHHHHHH----
T ss_pred CcHHHHHHHHHHHHHHHHHhCCCCcEEEE--EeChHHHHHHHHHHhCccccceEEEECcccccchhhhhHHHHHHH----
Confidence 46678899999998887532 256776 66765 568889999999999999996544332221111110000
Q ss_pred hhhhhhHHHHHHHHHhCC-C----cccccccc--ccc-cccccccCCchhHHHHHHHhcchhhhhHhhhcCcCCCCCCCc
Q 022534 164 EFTAQNAIMAERFIEAGS-P----YVLKLDKA--DVY-RLPYLASSGPGFALLEAARKVNFKDISSRIGAGFSSGSWDKP 235 (295)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~-~----~~~~~~~~--~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P 235 (295)
.....+..... . ........ ..+ ..+..........+...... ...+....+ .++++|
T Consensus 183 -------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~------~~i~~P 248 (342)
T 3hju_A 183 -------KVLNLVLPNLSLGPIDSSVLSRNKTEVDIYNSDPLICRAGLKVCFGIQLLN-AVSRVERAL------PKLTVP 248 (342)
T ss_dssp -------HHHHHHCTTCBCCCCCGGGSCSCHHHHHHHHTCTTCCCSCCBHHHHHHHHH-HHHHHHHHG------GGCCSC
T ss_pred -------HHHHHhccccccCcccccccccchHHHHHHhcCcccccccccHHHHHHHHH-HHHHHHHHH------HhCCcC
Confidence 00000000000 0 00000000 000 00000000000011100000 001111111 256899
Q ss_pred EEEEEeCCCCCCCcchHHHHHhcCCC-CeEEEEecCCCCCCCCCChHHHHHH---HHHHHHh
Q 022534 236 VLVAWGISDKYLPQSVAEEFQKGNPN-VVKLQMIEGAGHMPQEDWPEKVVDG---LRYFFLN 293 (295)
Q Consensus 236 ~l~i~G~~D~~~~~~~~~~~~~~~~~-~~~~~~i~~~gH~~~~e~p~~~~~~---i~~fl~~ 293 (295)
+|+|+|++|.+++.+.+..+.+.++. ++++++++++||+++.|+|+++.+. +.+||..
T Consensus 249 vlii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~~~l~~ 310 (342)
T 3hju_A 249 FLLLQGSADRLCDSKGAYLLMELAKSQDKTLKIYEGAYHVLHKELPEVTNSVFHEINMWVSQ 310 (342)
T ss_dssp EEEEEETTCSSSCHHHHHHHHHHCCCSSEEEEEETTCCSCGGGSCHHHHHHHHHHHHHHHHH
T ss_pred EEEEEeCCCcccChHHHHHHHHHcCCCCceEEEECCCCchhhcCChHHHHHHHHHHHHHHhc
Confidence 99999999999999999999988873 3799999999999999999877666 5555543
|
| >3vdx_A Designed 16NM tetrahedral protein CAGE containing bromoperoxidase BPO-A2 and matrix...; protein design, bionanotechnology; 3.00A {Streptomyces aureofaciens} PDB: 4d9j_A | Back alignment and structure |
|---|
Probab=99.96 E-value=9.8e-29 Score=226.48 Aligned_cols=255 Identities=22% Similarity=0.279 Sum_probs=163.4
Q ss_pred eEEeCcEEEEEEEcCCCCCCCceEEEEcCCCCCCccchhhHHHhhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCCHHHHH
Q 022534 15 YIKSGEYRWFVRETGSADSRLGTIVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFH 94 (295)
Q Consensus 15 ~~~~~~~~~~~~~~g~~~~~~~~vv~lHG~~~~~~~w~~~~~~l~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~ 94 (295)
+++.+|.+++|...|+ .|+|||+||++++...|..+++.|++.||+|+++|+||||.|+.+.. .++.++++
T Consensus 8 ~~~~dG~~l~y~~~G~----gp~VV~lHG~~~~~~~~~~l~~~La~~Gy~Vi~~D~rG~G~S~~~~~-----~~s~~~~a 78 (456)
T 3vdx_A 8 QENSTSIDLYYEDHGT----GVPVVLIHGFPLSGHSWERQSAALLDAGYRVITYDRRGFGQSSQPTT-----GYDYDTFA 78 (456)
T ss_dssp EETTEEEEEEEEEESS----SEEEEEECCTTCCGGGGTTHHHHHHHHTEEEEEECCTTSTTSCCCSS-----CCSHHHHH
T ss_pred ccccCCeEEEEEEeCC----CCEEEEECCCCCcHHHHHHHHHHHHHCCcEEEEECCCCCCCCCCCCC-----CCCHHHHH
Confidence 4566899999999884 36999999999999999999999976799999999999999997543 35789999
Q ss_pred HHHHHHHHHhCCCCceEEEEecccch-HHHHHHHHhC-cCccceeEEEcCCCCCCCC---Cchhh--hhhhcccchhhhh
Q 022534 95 EELDKLLDVLEVKYPFFLVVQGFLVG-SYGLTWALKN-PSRISKLAILNSPLTASSP---LPGLF--QQLRIPLLGEFTA 167 (295)
Q Consensus 95 ~~l~~~~~~l~~~~~~~lv~~G~~~G-~~~~~~a~~~-p~~v~~lil~~~p~~~~~~---~~~~~--~~~~~~~~~~~~~ 167 (295)
+|+.++++.++.++ ++++ |||+| .+++.+|+.+ |++|+++++++++...... .+... ......+......
T Consensus 79 ~dl~~~l~~l~~~~-v~Lv--GhS~GG~ia~~~aa~~~p~~v~~lVli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (456)
T 3vdx_A 79 ADLNTVLETLDLQD-AVLV--GFSMGTGEVARYVSSYGTARIAAVAFLASLEPFLLKTDDNPDGAAPQEFFDGIVAAVKA 155 (456)
T ss_dssp HHHHHHHHHHTCCS-EEEE--EEGGGGHHHHHHHHHHCSSSEEEEEEESCCCSCCBCCSSCCSCSBCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCC-eEEE--EECHHHHHHHHHHHhcchhheeEEEEeCCcccccccccccccccchHHHHHHHHHhhhc
Confidence 99999999998774 6676 67776 4778887776 9999999998754322111 00000 0000000000000
Q ss_pred hhHHHHHHHHHhC---CCccccccccccccccccccCCchhHHHHHHHhcchhhhhH---hhhcC--cCCCCCCCcEEEE
Q 022534 168 QNAIMAERFIEAG---SPYVLKLDKADVYRLPYLASSGPGFALLEAARKVNFKDISS---RIGAG--FSSGSWDKPVLVA 239 (295)
Q Consensus 168 ~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~--~~~~~~~~P~l~i 239 (295)
........+.... .............+ ................ ..... -...++++|+|+|
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~i~~PvLiI 224 (456)
T 3vdx_A 156 DRYAFYTGFFNDFYNLDENLGTRISEEAVR-----------NSWNTAASGGFFAAAAAPTTWYTDFRADIPRIDVPALIL 224 (456)
T ss_dssp CHHHHHHHHHHHHTTTTTSBTTTBCHHHHH-----------HHHHHHHTSCTTHHHHGGGGTTCCCTTTSTTCCSCCEEE
T ss_pred cchHHHHHHHHHHhcccccccccccHHHHH-----------HHhhhccccchhhhhhhhhhhhhhHHHHhhhCCCCEEEE
Confidence 0000011111100 00000000000000 0000000000000000 00000 0123679999999
Q ss_pred EeCCCCCCCcc-hHHHHHhcCCCCeEEEEecCCCCCCCCCChHHHHHHHHHHHHh
Q 022534 240 WGISDKYLPQS-VAEEFQKGNPNVVKLQMIEGAGHMPQEDWPEKVVDGLRYFFLN 293 (295)
Q Consensus 240 ~G~~D~~~~~~-~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 293 (295)
+|++|.+++++ ....+.+..++ +++++++++||++++|+|+++++.|.+||..
T Consensus 225 ~G~~D~~vp~~~~~~~l~~~~~~-~~~~~i~gagH~~~~e~p~~v~~~I~~FL~~ 278 (456)
T 3vdx_A 225 HGTGDRTLPIENTARVFHKALPS-AEYVEVEGAPHGLLWTHAEEVNTALLAFLAK 278 (456)
T ss_dssp EETTCSSSCGGGTHHHHHHHCTT-SEEEEETTCCSCTTTTTHHHHHHHHHHHHHH
T ss_pred EeCCCCCcCHHHHHHHHHHHCCC-ceEEEeCCCCCcchhhCHHHHHHHHHHHHHH
Confidence 99999999988 67778888886 7999999999999999999999999999975
|
| >3i28_A Epoxide hydrolase 2; aromatic hydrocarbons catabolism, detoxification, magnesium, metal-binding, peroxisome; HET: 34N; 1.95A {Homo sapiens} PDB: 1s8o_A* 1zd2_P* 1vj5_A* 1zd4_A* 1zd5_A* 3i1y_A* 1zd3_A* 3koo_A* 3otq_A* 4hai_A* 1cqz_A 1cr6_A* 1ek1_A* 1ek2_A* 3ans_A* 3ant_A* 3pdc_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=1.7e-28 Score=228.23 Aligned_cols=269 Identities=22% Similarity=0.315 Sum_probs=171.0
Q ss_pred eeEEe-CcEEEEEEEcCCCCCCCceEEEEcCCCCCCccchhhHHHhhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCCHHH
Q 022534 14 SYIKS-GEYRWFVRETGSADSRLGTIVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTENE 92 (295)
Q Consensus 14 ~~~~~-~~~~~~~~~~g~~~~~~~~vv~lHG~~~~~~~w~~~~~~l~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~ 92 (295)
.+++. +|.+++|...|+ .|+|||+||+++++..|..+++.|+++||+|+++|+||||.|+.+.. ...|+.++
T Consensus 240 ~~~~~~dg~~l~~~~~g~----~p~vv~~HG~~~~~~~~~~~~~~l~~~G~~v~~~D~~G~G~S~~~~~---~~~~~~~~ 312 (555)
T 3i28_A 240 GYVTVKPRVRLHFVELGS----GPAVCLCHGFPESWYSWRYQIPALAQAGYRVLAMDMKGYGESSAPPE---IEEYCMEV 312 (555)
T ss_dssp EEEEEETTEEEEEEEECS----SSEEEEECCTTCCGGGGTTHHHHHHHTTCEEEEECCTTSTTSCCCSC---GGGGSHHH
T ss_pred eEEEeCCCcEEEEEEcCC----CCEEEEEeCCCCchhHHHHHHHHHHhCCCEEEEecCCCCCCCCCCCC---cccccHHH
Confidence 45555 899999999884 36999999999999999999999998899999999999999997642 22568899
Q ss_pred HHHHHHHHHHHhCCCCceEEEEecccch-HHHHHHHHhCcCccceeEEEcCCCCCCCCCchhhhhh-hcccchh---hhh
Q 022534 93 FHEELDKLLDVLEVKYPFFLVVQGFLVG-SYGLTWALKNPSRISKLAILNSPLTASSPLPGLFQQL-RIPLLGE---FTA 167 (295)
Q Consensus 93 ~~~~l~~~~~~l~~~~~~~lv~~G~~~G-~~~~~~a~~~p~~v~~lil~~~p~~~~~~~~~~~~~~-~~~~~~~---~~~ 167 (295)
+++|+.+++++++.++ ++++ |||+| .+++.+|.++|++|+++++++++.............. ..+.... +..
T Consensus 313 ~~~d~~~~~~~l~~~~-~~lv--GhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 389 (555)
T 3i28_A 313 LCKEMVTFLDKLGLSQ-AVFI--GHDWGGMLVWYMALFYPERVRAVASLNTPFIPANPNMSPLESIKANPVFDYQLYFQE 389 (555)
T ss_dssp HHHHHHHHHHHHTCSC-EEEE--EETHHHHHHHHHHHHCGGGEEEEEEESCCCCCCCTTSCHHHHHHTCGGGHHHHHHHS
T ss_pred HHHHHHHHHHHcCCCc-EEEE--EecHHHHHHHHHHHhChHheeEEEEEccCCCCCCcccchHHHHhcCCccchhHHhhC
Confidence 9999999999998774 6676 67766 4688889999999999999987665432221111110 0010000 000
Q ss_pred ---hhHHH---HHHHHHh----CCCccccccc----ccc-ccccc---cccCCchhH---HHHHHHhcchhh-------h
Q 022534 168 ---QNAIM---AERFIEA----GSPYVLKLDK----ADV-YRLPY---LASSGPGFA---LLEAARKVNFKD-------I 219 (295)
Q Consensus 168 ---~~~~~---~~~~~~~----~~~~~~~~~~----~~~-~~~~~---~~~~~~~~~---~~~~~~~~~~~~-------~ 219 (295)
..... ..+++.. .......... ... ...+. ......... +........+.. .
T Consensus 390 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 469 (555)
T 3i28_A 390 PGVAEAELEQNLSRTFKSLFRASDESVLSMHKVCEAGGLFVNSPEEPSLSRMVTEEEIQFYVQQFKKSGFRGPLNWYRNM 469 (555)
T ss_dssp TTHHHHHHHHCHHHHHHHHSCCTTSCCCCCSSHHHHTSSSTTSCSSCCCCTTCCHHHHHHHHHHHTTTTTHHHHHTTSCH
T ss_pred CCchHHHHhhhHHHHHHHHhccccccccccccccccccccccCccccccccccCHHHHHHHHHHHhcccchhHHHHHHhc
Confidence 00000 0011110 0000000000 000 00000 000000000 011111000000 0
Q ss_pred hH--hhhcCcCCCCCCCcEEEEEeCCCCCCCcchHHHHHhcCCCCeEEEEecCCCCCCCCCChHHHHHHHHHHHHh
Q 022534 220 SS--RIGAGFSSGSWDKPVLVAWGISDKYLPQSVAEEFQKGNPNVVKLQMIEGAGHMPQEDWPEKVVDGLRYFFLN 293 (295)
Q Consensus 220 ~~--~~~~~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 293 (295)
.. .....-..+++++|+|+|+|++|++++++.++.+++.+++ +++++++++||++++|+|+++++.|.+||.+
T Consensus 470 ~~~~~~~~~~~~~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~-~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~ 544 (555)
T 3i28_A 470 ERNWKWACKSLGRKILIPALMVTAEKDFVLVPQMSQHMEDWIPH-LKRGHIEDCGHWTQMDKPTEVNQILIKWLDS 544 (555)
T ss_dssp HHHHHHHHTTTTCCCCSCEEEEEETTCSSSCGGGGTTGGGTCTT-CEEEEETTCCSCHHHHSHHHHHHHHHHHHHH
T ss_pred cccchhhccccccccccCEEEEEeCCCCCcCHHHHHHHHhhCCC-ceEEEeCCCCCCcchhCHHHHHHHHHHHHHh
Confidence 00 0000111247899999999999999999999999998987 7999999999999999999999999999976
|
| >1azw_A Proline iminopeptidase; aminopeptidase, serine protease, xanthomonas campestris; 2.70A {Xanthomonas citri} SCOP: c.69.1.7 | Back alignment and structure |
|---|
Probab=99.96 E-value=2e-28 Score=212.38 Aligned_cols=124 Identities=19% Similarity=0.249 Sum_probs=96.4
Q ss_pred ccceeeEEe-CcEEEEEEEcCCCCCCCceEEEEcCCCCCCccchhhHHHhhhCCCeEEEeCCCCCCCCCCCCCCCCCCCC
Q 022534 10 REYGSYIKS-GEYRWFVRETGSADSRLGTIVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDF 88 (295)
Q Consensus 10 ~~~~~~~~~-~~~~~~~~~~g~~~~~~~~vv~lHG~~~~~~~w~~~~~~l~~~~~~via~Dl~G~G~S~~~~~~~~~~~~ 88 (295)
+....++++ +|.+++|.+.|+++ .++|||+||++++.. |..+...+...+|+||++|+||||+|+.+... ..|
T Consensus 10 ~~~~~~~~~~~g~~l~y~~~G~~~--g~pvvllHG~~~~~~-~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~---~~~ 83 (313)
T 1azw_A 10 PYQQGSLKVDDRHTLYFEQCGNPH--GKPVVMLHGGPGGGC-NDKMRRFHDPAKYRIVLFDQRGSGRSTPHADL---VDN 83 (313)
T ss_dssp CSEEEEEECSSSCEEEEEEEECTT--SEEEEEECSTTTTCC-CGGGGGGSCTTTEEEEEECCTTSTTSBSTTCC---TTC
T ss_pred ccccceEEcCCCCEEEEEecCCCC--CCeEEEECCCCCccc-cHHHHHhcCcCcceEEEECCCCCcCCCCCccc---ccc
Confidence 344566777 78999999988643 368999999987653 33344455445899999999999999865321 246
Q ss_pred CHHHHHHHHHHHHHHhCCCCceEEEEecccch-HHHHHHHHhCcCccceeEEEcC
Q 022534 89 TENEFHEELDKLLDVLEVKYPFFLVVQGFLVG-SYGLTWALKNPSRISKLAILNS 142 (295)
Q Consensus 89 ~~~~~~~~l~~~~~~l~~~~~~~lv~~G~~~G-~~~~~~a~~~p~~v~~lil~~~ 142 (295)
+.+++++|+.++++++++++ ++|+ |||+| .+++.+|.++|++|+++|++++
T Consensus 84 ~~~~~~~dl~~l~~~l~~~~-~~lv--GhSmGg~ia~~~a~~~p~~v~~lvl~~~ 135 (313)
T 1azw_A 84 TTWDLVADIERLRTHLGVDR-WQVF--GGSWGSTLALAYAQTHPQQVTELVLRGI 135 (313)
T ss_dssp CHHHHHHHHHHHHHHTTCSS-EEEE--EETHHHHHHHHHHHHCGGGEEEEEEESC
T ss_pred cHHHHHHHHHHHHHHhCCCc-eEEE--EECHHHHHHHHHHHhChhheeEEEEecc
Confidence 88999999999999999886 6666 77776 5688999999999999999864
|
| >3p2m_A Possible hydrolase; alpha/beta hydrolase superfamily; 2.80A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=99.96 E-value=2.1e-28 Score=214.37 Aligned_cols=247 Identities=19% Similarity=0.266 Sum_probs=159.9
Q ss_pred eeEEeCcEEEEEEEcCCCCCCCceEEEEcCCCCCCccchhhHHHhhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCCHHHH
Q 022534 14 SYIKSGEYRWFVRETGSADSRLGTIVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEF 93 (295)
Q Consensus 14 ~~~~~~~~~~~~~~~g~~~~~~~~vv~lHG~~~~~~~w~~~~~~l~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~ 93 (295)
.+...++..++|...|++ +|+|||+||++++...|..+++.| ||+|+++|+||||.|+.+.. ..|+.+++
T Consensus 63 ~~~~~~~~~~~~~~~g~~---~~~vv~~hG~~~~~~~~~~~~~~l---g~~Vi~~D~~G~G~S~~~~~----~~~~~~~~ 132 (330)
T 3p2m_A 63 EVERVQAGAISALRWGGS---APRVIFLHGGGQNAHTWDTVIVGL---GEPALAVDLPGHGHSAWRED----GNYSPQLN 132 (330)
T ss_dssp CEEEEEETTEEEEEESSS---CCSEEEECCTTCCGGGGHHHHHHS---CCCEEEECCTTSTTSCCCSS----CBCCHHHH
T ss_pred CceeecCceEEEEEeCCC---CCeEEEECCCCCccchHHHHHHHc---CCeEEEEcCCCCCCCCCCCC----CCCCHHHH
Confidence 555666777888888864 368999999999999999998887 79999999999999996542 25688999
Q ss_pred HHHHHHHHHHhCCCCceEEEEecccch-HHHHHHHHhCcCccceeEEEcCCCCCCC-------CCchhhhhhhcccchhh
Q 022534 94 HEELDKLLDVLEVKYPFFLVVQGFLVG-SYGLTWALKNPSRISKLAILNSPLTASS-------PLPGLFQQLRIPLLGEF 165 (295)
Q Consensus 94 ~~~l~~~~~~l~~~~~~~lv~~G~~~G-~~~~~~a~~~p~~v~~lil~~~p~~~~~-------~~~~~~~~~~~~~~~~~ 165 (295)
++|+.++++.++.++ ++++ |||+| .+++.+|.++|++|+++|+++++..... ............ ..+
T Consensus 133 a~dl~~~l~~l~~~~-v~lv--GhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~ 207 (330)
T 3p2m_A 133 SETLAPVLRELAPGA-EFVV--GMSLGGLTAIRLAAMAPDLVGELVLVDVTPSALQRHAELTAEQRGTVALMHGE--REF 207 (330)
T ss_dssp HHHHHHHHHHSSTTC-CEEE--EETHHHHHHHHHHHHCTTTCSEEEEESCCHHHHHHHHHHTCC-------------CCB
T ss_pred HHHHHHHHHHhCCCC-cEEE--EECHhHHHHHHHHHhChhhcceEEEEcCCCccchhhhhhhhhhhhhhhhhcCC--ccc
Confidence 999999999998775 6676 67766 5688899999999999999975321000 000000000000 000
Q ss_pred hhhhHHHHHHHHHhCCCccc-----------cccccccccccccccCCchhHHHHHHHhcchhhhhHhhhcCcCCCCCCC
Q 022534 166 TAQNAIMAERFIEAGSPYVL-----------KLDKADVYRLPYLASSGPGFALLEAARKVNFKDISSRIGAGFSSGSWDK 234 (295)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (295)
...... ...+......... .......+...+.. ... . ....+....+ .++++
T Consensus 208 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~--------~~~~~~~~~l------~~i~~ 270 (330)
T 3p2m_A 208 PSFQAM-LDLTIAAAPHRDVKSLRRGVFHNSRRLDNGNWVWRYDA-IRT-F--------GDFAGLWDDV------DALSA 270 (330)
T ss_dssp SCHHHH-HHHHHHHCTTSCHHHHHHHHHTTEEECSSSCEEESSCC-CSB-C--------CCHHHHHHHH------HHCCS
T ss_pred cCHHHH-HHHHHhcCCCCCHHHHHHHHHhcccccCCCceEEeech-hhC-c--------cccHHHHHHH------hhCCC
Confidence 000000 0000000000000 00000000000000 000 0 0000111111 15689
Q ss_pred cEEEEEeCCCCCCCcchHHHHHhcCCCCeE-EEEecCCCCCCCCCChHHHHHHHHHHHHh
Q 022534 235 PVLVAWGISDKYLPQSVAEEFQKGNPNVVK-LQMIEGAGHMPQEDWPEKVVDGLRYFFLN 293 (295)
Q Consensus 235 P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~-~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 293 (295)
|+|+|+|++|.+++++.++.+.+.+++ ++ +++++++||++++|+|+++++.|.+||.+
T Consensus 271 PvLii~G~~D~~v~~~~~~~l~~~~~~-~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 329 (330)
T 3p2m_A 271 PITLVRGGSSGFVTDQDTAELHRRATH-FRGVHIVEKSGHSVQSDQPRALIEIVRGVLDT 329 (330)
T ss_dssp CEEEEEETTCCSSCHHHHHHHHHHCSS-EEEEEEETTCCSCHHHHCHHHHHHHHHHHTTC
T ss_pred CEEEEEeCCCCCCCHHHHHHHHHhCCC-CeeEEEeCCCCCCcchhCHHHHHHHHHHHHhc
Confidence 999999999999999999999999987 68 99999999999999999999999999864
|
| >2y6u_A Peroxisomal membrane protein LPX1; hydrolase, putative esterase, putative lipase; HET: CME CSO; 1.90A {Saccharomyces cerevisiae} PDB: 2y6v_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=1.6e-29 Score=226.66 Aligned_cols=272 Identities=15% Similarity=0.171 Sum_probs=167.7
Q ss_pred cceeeEEeCcEEEEEEEcCCCC-------CCCceEEEEcCCCCCCccchhhHHHhh----hCCC---eEEEeCCCCCCCC
Q 022534 11 EYGSYIKSGEYRWFVRETGSAD-------SRLGTIVFLHGAPSHSYSYRNVMSQMS----DAGF---HCFAPDWLGFGFS 76 (295)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~g~~~-------~~~~~vv~lHG~~~~~~~w~~~~~~l~----~~~~---~via~Dl~G~G~S 76 (295)
....+++.+|.+++|..+|+.+ .++|+|||+||+++++..|..+++.|+ ..|| +|+++|+||||.|
T Consensus 21 ~~~~~~~~dg~~l~~~~~g~~~~~~~~~~~~~~~vvllHG~~~~~~~~~~~~~~L~~~~~~~G~~~~~vi~~D~~G~G~S 100 (398)
T 2y6u_A 21 PQSTLCATDRLELTYDVYTSAERQRRSRTATRLNLVFLHGSGMSKVVWEYYLPRLVAADAEGNYAIDKVLLIDQVNHGDS 100 (398)
T ss_dssp TTSBSSTTCCCEEEEEEEEESCTTTCCTTCEEEEEEEECCTTCCGGGGGGGGGGSCCCBTTTTEEEEEEEEECCTTSHHH
T ss_pred CCccccCCCceEEEEEEEecCCCCCCCCCCCCCeEEEEcCCCCcHHHHHHHHHHHHHhhhhcCcceeEEEEEcCCCCCCC
Confidence 3445667789999999988643 234799999999999999999999998 3378 9999999999999
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHHHHHHhC----CCC-ceEEEEecccch-HHHHHHHHhCcCccceeEEEcCCCCCCC--
Q 022534 77 DKPEKGYDDFDFTENEFHEELDKLLDVLE----VKY-PFFLVVQGFLVG-SYGLTWALKNPSRISKLAILNSPLTASS-- 148 (295)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~l~~~~~~l~----~~~-~~~lv~~G~~~G-~~~~~~a~~~p~~v~~lil~~~p~~~~~-- 148 (295)
+.+........++.+++++|+.++++.+. .++ +++++ |||+| .+++.+|.++|++|+++|+++++.....
T Consensus 101 ~~~~~~~~~~~~~~~~~~~dl~~~l~~~~~~~~~~~~~~~lv--GhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~ 178 (398)
T 2y6u_A 101 AVRNRGRLGTNFNWIDGARDVLKIATCELGSIDSHPALNVVI--GHSMGGFQALACDVLQPNLFHLLILIEPVVITRKAI 178 (398)
T ss_dssp HHHTTTTBCSCCCHHHHHHHHHHHHHHHTCSSTTCSEEEEEE--EETHHHHHHHHHHHHCTTSCSEEEEESCCCSCCCCC
T ss_pred CCCCccccCCCCCcchHHHHHHHHHHHhcccccccCCceEEE--EEChhHHHHHHHHHhCchheeEEEEecccccccccc
Confidence 86432111235688999999999999753 332 46676 67776 5688889999999999999975443211
Q ss_pred -----CCch--------hhhhhhcccchhhhhhhHHHHHHHHHhCCCc-ccccccccccc-ccccc------------cC
Q 022534 149 -----PLPG--------LFQQLRIPLLGEFTAQNAIMAERFIEAGSPY-VLKLDKADVYR-LPYLA------------SS 201 (295)
Q Consensus 149 -----~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~-~~~~~------------~~ 201 (295)
..+. ....+.......+... .. ...++.....+ .........+. ..... ..
T Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (398)
T 2y6u_A 179 GAGRPGLPPDSPQIPENLYNSLRLKTCDHFANE-SE-YVKYMRNGSFFTNAHSQILQNIIDFERTKASGDDEDGGPVRTK 256 (398)
T ss_dssp SCCCTTCCTTCCCCCHHHHHHHHHTCCCEESSH-HH-HHHHHHHTSTTTTSCHHHHHHHHHHHEEC--------CCEEES
T ss_pred ccccccccccccccchhhHHHhhhhccccCCCH-HH-HHHHhhcCcccccCCHHHHHHHHHhcCccccccccCCCceEec
Confidence 0000 0000000000000000 00 00111100000 00000000000 00000 00
Q ss_pred CchhHHHHHHHhc--chhhhhHhhhcCcCCCCCCCcEEEEEeCCCCCCCcchHHHHHhcCCCCeEEEEecCCCCCCCCCC
Q 022534 202 GPGFALLEAARKV--NFKDISSRIGAGFSSGSWDKPVLVAWGISDKYLPQSVAEEFQKGNPNVVKLQMIEGAGHMPQEDW 279 (295)
Q Consensus 202 ~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~ 279 (295)
............. ...+....+ ..+++|+|+|+|++|.+++++.+..+.+.+++ +++++++++||++++|+
T Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~l------~~i~~PvLii~G~~D~~~~~~~~~~l~~~~~~-~~~~~~~~~gH~~~~e~ 329 (398)
T 2y6u_A 257 MEQAQNLLCYMNMQTFAPFLISNV------KFVRKRTIHIVGARSNWCPPQNQLFLQKTLQN-YHLDVIPGGSHLVNVEA 329 (398)
T ss_dssp SCHHHHHHTTSCGGGTHHHHHHHG------GGCCSEEEEEEETTCCSSCHHHHHHHHHHCSS-EEEEEETTCCTTHHHHS
T ss_pred CCchhhhhhhcccccchHHHHHhc------cccCCCEEEEEcCCCCCCCHHHHHHHHHhCCC-ceEEEeCCCCccchhcC
Confidence 0000000000000 000111111 26789999999999999999999999999986 79999999999999999
Q ss_pred hHHHHHHHHHHHHh
Q 022534 280 PEKVVDGLRYFFLN 293 (295)
Q Consensus 280 p~~~~~~i~~fl~~ 293 (295)
|+++++.|.+||.+
T Consensus 330 p~~~~~~i~~fl~~ 343 (398)
T 2y6u_A 330 PDLVIERINHHIHE 343 (398)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 99999999999975
|
| >3pfb_A Cinnamoyl esterase; alpha/beta hydrolase fold, hydrolase, cinnamoyl/Fe esterase, hydroxycinammates, extracellular; HET: ZYC; 1.58A {Lactobacillus johnsonii} PDB: 3pf9_A* 3pfc_A* 3s2z_A* 3pf8_A 3qm1_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=2.5e-28 Score=206.86 Aligned_cols=239 Identities=18% Similarity=0.208 Sum_probs=165.8
Q ss_pred cceeeEEeCcEEEEEEEcCCCCCCCceEEEEcCCCCC--CccchhhHHHhhhCCCeEEEeCCCCCCCCCCCCCCCCCCCC
Q 022534 11 EYGSYIKSGEYRWFVRETGSADSRLGTIVFLHGAPSH--SYSYRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDF 88 (295)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~g~~~~~~~~vv~lHG~~~~--~~~w~~~~~~l~~~~~~via~Dl~G~G~S~~~~~~~~~~~~ 88 (295)
....+++.+|.+++|...++..+++|+|||+||++++ ...|..+++.|++.||+|+++|+||||.|+.+.. .+
T Consensus 22 ~~~~~~~~~g~~l~~~~~~p~~~~~p~vv~~HG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~-----~~ 96 (270)
T 3pfb_A 22 MATITLERDGLQLVGTREEPFGEIYDMAIIFHGFTANRNTSLLREIANSLRDENIASVRFDFNGHGDSDGKFE-----NM 96 (270)
T ss_dssp EEEEEEEETTEEEEEEEEECSSSSEEEEEEECCTTCCTTCHHHHHHHHHHHHTTCEEEEECCTTSTTSSSCGG-----GC
T ss_pred ceEEEeccCCEEEEEEEEcCCCCCCCEEEEEcCCCCCccccHHHHHHHHHHhCCcEEEEEccccccCCCCCCC-----cc
Confidence 4556788899999999988765557899999999987 5568999999988899999999999999987432 34
Q ss_pred CHHHHHHHHHHHHHHh----CCCCceEEEEecccch-HHHHHHHHhCcCccceeEEEcCCCCCCCCCchhhhhhhcccch
Q 022534 89 TENEFHEELDKLLDVL----EVKYPFFLVVQGFLVG-SYGLTWALKNPSRISKLAILNSPLTASSPLPGLFQQLRIPLLG 163 (295)
Q Consensus 89 ~~~~~~~~l~~~~~~l----~~~~~~~lv~~G~~~G-~~~~~~a~~~p~~v~~lil~~~p~~~~~~~~~~~~~~~~~~~~ 163 (295)
+.+++++|+.++++.+ +.+ +++++ |||+| .+++.+|.++|++|+++++++++... ..........
T Consensus 97 ~~~~~~~d~~~~i~~l~~~~~~~-~i~l~--G~S~Gg~~a~~~a~~~p~~v~~~v~~~~~~~~-------~~~~~~~~~~ 166 (270)
T 3pfb_A 97 TVLNEIEDANAILNYVKTDPHVR-NIYLV--GHAQGGVVASMLAGLYPDLIKKVVLLAPAATL-------KGDALEGNTQ 166 (270)
T ss_dssp CHHHHHHHHHHHHHHHHTCTTEE-EEEEE--EETHHHHHHHHHHHHCTTTEEEEEEESCCTHH-------HHHHHHTEET
T ss_pred CHHHHHHhHHHHHHHHHhCcCCC-eEEEE--EeCchhHHHHHHHHhCchhhcEEEEecccccc-------chhhhhhhhh
Confidence 7788999999999987 545 46676 67766 46788889999999999998643211 0000000000
Q ss_pred hhhhhhHHHHHHHHHhCCCccccccccccccccccccCCchhHHHHHHHhcchhhhhHhhhcCcCCCCCCCcEEEEEeCC
Q 022534 164 EFTAQNAIMAERFIEAGSPYVLKLDKADVYRLPYLASSGPGFALLEAARKVNFKDISSRIGAGFSSGSWDKPVLVAWGIS 243 (295)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~ 243 (295)
.. ...+...... ...... .....+......... ...+ ..+++|+|+++|++
T Consensus 167 ~~-------------~~~~~~~~~~-~~~~~~------~~~~~~~~~~~~~~~---~~~~------~~~~~P~l~i~g~~ 217 (270)
T 3pfb_A 167 GV-------------TYNPDHIPDR-LPFKDL------TLGGFYLRIAQQLPI---YEVS------AQFTKPVCLIHGTD 217 (270)
T ss_dssp TE-------------ECCTTSCCSE-EEETTE------EEEHHHHHHHHHCCH---HHHH------TTCCSCEEEEEETT
T ss_pred cc-------------ccCccccccc-cccccc------ccchhHhhcccccCH---HHHH------hhCCccEEEEEcCC
Confidence 00 0000000000 000000 000111222221211 1122 26789999999999
Q ss_pred CCCCCcchHHHHHhcCCCCeEEEEecCCCCCCCCCChHHHHHHHHHHHHhc
Q 022534 244 DKYLPQSVAEEFQKGNPNVVKLQMIEGAGHMPQEDWPEKVVDGLRYFFLNY 294 (295)
Q Consensus 244 D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~ 294 (295)
|.+++.+.+..+.+.+++ +++++++++||.++.++|+++.+.|.+||.+.
T Consensus 218 D~~~~~~~~~~~~~~~~~-~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~ 267 (270)
T 3pfb_A 218 DTVVSPNASKKYDQIYQN-STLHLIEGADHCFSDSYQKNAVNLTTDFLQNN 267 (270)
T ss_dssp CSSSCTHHHHHHHHHCSS-EEEEEETTCCTTCCTHHHHHHHHHHHHHHC--
T ss_pred CCCCCHHHHHHHHHhCCC-CeEEEcCCCCcccCccchHHHHHHHHHHHhhc
Confidence 999999999999988886 79999999999999999999999999999763
|
| >3e0x_A Lipase-esterase related protein; APC60309, clostridium acetobutylicum ATCC 824, structural genomics, PSI-2; HET: MSE; 1.45A {Clostridium acetobutylicum} | Back alignment and structure |
|---|
Probab=99.96 E-value=7.9e-29 Score=206.02 Aligned_cols=236 Identities=15% Similarity=0.203 Sum_probs=154.8
Q ss_pred cEEEEEEEcCCCCCCCceEEEEcCCCCCCccchhhHHHhhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH
Q 022534 20 EYRWFVRETGSADSRLGTIVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEELDK 99 (295)
Q Consensus 20 ~~~~~~~~~g~~~~~~~~vv~lHG~~~~~~~w~~~~~~l~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~l~~ 99 (295)
|.+++|...|+++ .+|+|||+||++++...|. +++.|+ .||+|+++|+||||.|+.+. .++.+++++++.+
T Consensus 2 g~~l~y~~~g~~~-~~~~vv~~hG~~~~~~~~~-~~~~l~-~g~~v~~~d~~g~g~s~~~~------~~~~~~~~~~~~~ 72 (245)
T 3e0x_A 2 NAMLHYVHVGNKK-SPNTLLFVHGSGCNLKIFG-ELEKYL-EDYNCILLDLKGHGESKGQC------PSTVYGYIDNVAN 72 (245)
T ss_dssp CCCCCEEEEECTT-CSCEEEEECCTTCCGGGGT-TGGGGC-TTSEEEEECCTTSTTCCSCC------CSSHHHHHHHHHH
T ss_pred CceeEEEecCCCC-CCCEEEEEeCCcccHHHHH-HHHHHH-hCCEEEEecCCCCCCCCCCC------CcCHHHHHHHHHH
Confidence 4567888888653 3679999999999999999 888887 59999999999999998422 3578999999999
Q ss_pred HH------HHhCCCCceEEEEecccch-HHHHHHHHh-CcCccceeEEEcCCCCCCCCCchhhhhhhcccchhhhhhhHH
Q 022534 100 LL------DVLEVKYPFFLVVQGFLVG-SYGLTWALK-NPSRISKLAILNSPLTASSPLPGLFQQLRIPLLGEFTAQNAI 171 (295)
Q Consensus 100 ~~------~~l~~~~~~~lv~~G~~~G-~~~~~~a~~-~p~~v~~lil~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (295)
++ +.++ +++++ |||+| .+++.+|.+ +|+ |+++++++++.......+.....+........
T Consensus 73 ~~~~~~~~~~~~---~~~l~--G~S~Gg~~a~~~a~~~~p~-v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~------ 140 (245)
T 3e0x_A 73 FITNSEVTKHQK---NITLI--GYSMGGAIVLGVALKKLPN-VRKVVSLSGGARFDKLDKDFMEKIYHNQLDNN------ 140 (245)
T ss_dssp HHHHCTTTTTCS---CEEEE--EETHHHHHHHHHHTTTCTT-EEEEEEESCCSBCTTSCHHHHHHHHTTCCCHH------
T ss_pred HHHhhhhHhhcC---ceEEE--EeChhHHHHHHHHHHhCcc-ccEEEEecCCCccccccHHHHHHHHHHHHHhh------
Confidence 99 8776 56676 67766 467888889 999 99999997544332212211111111100000
Q ss_pred HHHHHHHhCCCccccccccccccccccccCCchhHHHHHHHhcchhhhhHhhhcCcCCCCCCCcEEEEEeCCCCCCCcch
Q 022534 172 MAERFIEAGSPYVLKLDKADVYRLPYLASSGPGFALLEAARKVNFKDISSRIGAGFSSGSWDKPVLVAWGISDKYLPQSV 251 (295)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~~~~~ 251 (295)
........ .........+.. . . ..+. .+..........+.... ..++++|+++|+|++|.+++++.
T Consensus 141 ~~~~~~~~----~~~~~~~~~~~~-~-~-~~~~-~~~~~~~~~~~~~~~~~------~~~~~~P~l~i~g~~D~~~~~~~ 206 (245)
T 3e0x_A 141 YLLECIGG----IDNPLSEKYFET-L-E-KDPD-IMINDLIACKLIDLVDN------LKNIDIPVKAIVAKDELLTLVEY 206 (245)
T ss_dssp HHHHHHTC----SCSHHHHHHHTT-S-C-SSHH-HHHHHHHHHHHCBCGGG------GGGCCSCEEEEEETTCSSSCHHH
T ss_pred cCcccccc----cchHHHHHHHHH-H-h-cCcH-HHHHHHHHhccccHHHH------HHhCCCCEEEEEeCCCCCCCHHH
Confidence 00000000 000000000000 0 0 0111 11111110000011111 12568999999999999999999
Q ss_pred HHHHHhcCCCCeEEEEecCCCCCCCCCChHHHHHHHHHHH
Q 022534 252 AEEFQKGNPNVVKLQMIEGAGHMPQEDWPEKVVDGLRYFF 291 (295)
Q Consensus 252 ~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl 291 (295)
+..+.+.+++ +++++++++||.++.|+|+++.+.|.+||
T Consensus 207 ~~~~~~~~~~-~~~~~~~~~gH~~~~~~~~~~~~~i~~fl 245 (245)
T 3e0x_A 207 SEIIKKEVEN-SELKIFETGKHFLLVVNAKGVAEEIKNFI 245 (245)
T ss_dssp HHHHHHHSSS-EEEEEESSCGGGHHHHTHHHHHHHHHTTC
T ss_pred HHHHHHHcCC-ceEEEeCCCCcceEEecHHHHHHHHHhhC
Confidence 9999999987 79999999999999999999999999885
|
| >3c5v_A PME-1, protein phosphatase methylesterase 1; demethylase, PP2A, alternative splicing, hydrolase, phosphoprotein, serine esterase; 2.00A {Homo sapiens} PDB: 3c5w_P | Back alignment and structure |
|---|
Probab=99.96 E-value=1e-28 Score=215.50 Aligned_cols=119 Identities=16% Similarity=0.298 Sum_probs=94.7
Q ss_pred eeEEeCc----EEEEEEEcCCCCCCCceEEEEcCCCCCCccchhhHHHhhh-CCCeEEEeCCCCCCCCCCCCCCCCCCCC
Q 022534 14 SYIKSGE----YRWFVRETGSADSRLGTIVFLHGAPSHSYSYRNVMSQMSD-AGFHCFAPDWLGFGFSDKPEKGYDDFDF 88 (295)
Q Consensus 14 ~~~~~~~----~~~~~~~~g~~~~~~~~vv~lHG~~~~~~~w~~~~~~l~~-~~~~via~Dl~G~G~S~~~~~~~~~~~~ 88 (295)
..+.+++ .+++|.+.|.+ .|+|||+||+++++..|..+++.|++ .+|+|+++|+||||+|+.+.. ..|
T Consensus 16 ~~~~~~~~~~~~~~~~~~~g~~---~p~lvllHG~~~~~~~w~~~~~~L~~~~~~~via~Dl~GhG~S~~~~~----~~~ 88 (316)
T 3c5v_A 16 EDVEVENETGKDTFRVYKSGSE---GPVLLLLHGGGHSALSWAVFTAAIISRVQCRIVALDLRSHGETKVKNP----EDL 88 (316)
T ss_dssp EEEEEEETTEEEEEEEEEECSS---SCEEEEECCTTCCGGGGHHHHHHHHTTBCCEEEEECCTTSTTCBCSCT----TCC
T ss_pred ceEEecCCcceEEEEEEecCCC---CcEEEEECCCCcccccHHHHHHHHhhcCCeEEEEecCCCCCCCCCCCc----ccc
Confidence 4555655 57888777732 36899999999999999999999975 279999999999999986532 246
Q ss_pred CHHHHHHHHHHHHHHh--CCCCceEEEEecccch-HHHHHHHHh--CcCccceeEEEcC
Q 022534 89 TENEFHEELDKLLDVL--EVKYPFFLVVQGFLVG-SYGLTWALK--NPSRISKLAILNS 142 (295)
Q Consensus 89 ~~~~~~~~l~~~~~~l--~~~~~~~lv~~G~~~G-~~~~~~a~~--~p~~v~~lil~~~ 142 (295)
+++++++|+.++++++ +..++++|+ |||+| .+++.+|.+ +|+ |+++|++++
T Consensus 89 ~~~~~a~dl~~~l~~l~~~~~~~~~lv--GhSmGG~ia~~~A~~~~~p~-v~~lvl~~~ 144 (316)
T 3c5v_A 89 SAETMAKDVGNVVEAMYGDLPPPIMLI--GHSMGGAIAVHTASSNLVPS-LLGLCMIDV 144 (316)
T ss_dssp CHHHHHHHHHHHHHHHHTTCCCCEEEE--EETHHHHHHHHHHHTTCCTT-EEEEEEESC
T ss_pred CHHHHHHHHHHHHHHHhccCCCCeEEE--EECHHHHHHHHHHhhccCCC-cceEEEEcc
Confidence 8999999999999999 653457777 67776 568888885 576 999999864
|
| >3qvm_A OLEI00960; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta hydrolase fold, hydrolase; 2.00A {Oleispira antarctica} | Back alignment and structure |
|---|
Probab=99.96 E-value=1.4e-29 Score=214.80 Aligned_cols=251 Identities=16% Similarity=0.186 Sum_probs=156.0
Q ss_pred EEEEcCCCCCCCceEEEEcCCCCCCccchhhHHHhhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
Q 022534 24 FVRETGSADSRLGTIVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEELDKLLDV 103 (295)
Q Consensus 24 ~~~~~g~~~~~~~~vv~lHG~~~~~~~w~~~~~~l~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~l~~~~~~ 103 (295)
+|...|++ +|+|||+||++++...|..+++.|++ ||+|+++|+||||.|+.+.... ...++.+++++++.++++.
T Consensus 20 ~~~~~g~~---~~~vv~lHG~~~~~~~~~~~~~~l~~-g~~v~~~d~~G~G~s~~~~~~~-~~~~~~~~~~~~~~~~~~~ 94 (282)
T 3qvm_A 20 NINITGGG---EKTVLLAHGFGCDQNMWRFMLPELEK-QFTVIVFDYVGSGQSDLESFST-KRYSSLEGYAKDVEEILVA 94 (282)
T ss_dssp TCEEEECS---SCEEEEECCTTCCGGGGTTTHHHHHT-TSEEEECCCTTSTTSCGGGCCT-TGGGSHHHHHHHHHHHHHH
T ss_pred ceeecCCC---CCeEEEECCCCCCcchHHHHHHHHhc-CceEEEEecCCCCCCCCCCCCc-cccccHHHHHHHHHHHHHH
Confidence 34445643 36999999999999999999999987 9999999999999999754221 1123789999999999999
Q ss_pred hCCCCceEEEEecccch-HHHHHHHHhCcCccceeEEEcCCCCCCCCCchh---hhhhhc-ccchhhhhhhHHHHHHHHH
Q 022534 104 LEVKYPFFLVVQGFLVG-SYGLTWALKNPSRISKLAILNSPLTASSPLPGL---FQQLRI-PLLGEFTAQNAIMAERFIE 178 (295)
Q Consensus 104 l~~~~~~~lv~~G~~~G-~~~~~~a~~~p~~v~~lil~~~p~~~~~~~~~~---~~~~~~-~~~~~~~~~~~~~~~~~~~ 178 (295)
++.++ ++++ |||+| .+++.+|.++|++|+++++++++.......+.. +..... ................+..
T Consensus 95 ~~~~~-~~lv--G~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (282)
T 3qvm_A 95 LDLVN-VSII--GHSVSSIIAGIASTHVGDRISDITMICPSPCFMNFPPDYVGGFERDDLEELINLMDKNYIGWANYLAP 171 (282)
T ss_dssp TTCCS-EEEE--EETHHHHHHHHHHHHHGGGEEEEEEESCCSBSBEETTTEECSBCHHHHHHHHHHHHHCHHHHHHHHHH
T ss_pred cCCCc-eEEE--EecccHHHHHHHHHhCchhhheEEEecCcchhccCchhhhchhccccHHHHHHHHhcchhhHHHHHHh
Confidence 98764 6676 67766 467888899999999999997543321111000 000000 0000000000000000000
Q ss_pred hCCCccccccccccccccccccCCchh--HHHHHHHhcchhhhhHhhhcCcCCCCCCCcEEEEEeCCCCCCCcchHHHHH
Q 022534 179 AGSPYVLKLDKADVYRLPYLASSGPGF--ALLEAARKVNFKDISSRIGAGFSSGSWDKPVLVAWGISDKYLPQSVAEEFQ 256 (295)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~ 256 (295)
..............+...+ ....+.. .+.......+.. .. ..++++|+++|+|++|.+++++.+..+.
T Consensus 172 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~---~~------~~~i~~P~l~i~g~~D~~~~~~~~~~~~ 241 (282)
T 3qvm_A 172 LVMGASHSSELIGELSGSF-CTTDPIVAKTFAKATFFSDYR---SL------LEDISTPALIFQSAKDSLASPEVGQYMA 241 (282)
T ss_dssp HHHCTTSCHHHHHHHHHHH-HHSCHHHHHHHHHHHHSCBCG---GG------GGGCCSCEEEEEEEECTTCCHHHHHHHH
T ss_pred hccCCccchhhHHHHHHHH-hcCCcHHHHHHHHHHhcccHH---HH------HhcCCCCeEEEEeCCCCcCCHHHHHHHH
Confidence 0000000000000000000 0000000 011111101111 11 1257899999999999999999999999
Q ss_pred hcCCCCeEEEEecCCCCCCCCCChHHHHHHHHHHHHh
Q 022534 257 KGNPNVVKLQMIEGAGHMPQEDWPEKVVDGLRYFFLN 293 (295)
Q Consensus 257 ~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 293 (295)
+.+++ +++++++++||++++|+|+++++.|.+||.+
T Consensus 242 ~~~~~-~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 277 (282)
T 3qvm_A 242 ENIPN-SQLELIQAEGHCLHMTDAGLITPLLIHFIQN 277 (282)
T ss_dssp HHSSS-EEEEEEEEESSCHHHHCHHHHHHHHHHHHHH
T ss_pred HhCCC-CcEEEecCCCCcccccCHHHHHHHHHHHHHh
Confidence 99987 7999999999999999999999999999976
|
| >1tht_A Thioesterase; 2.10A {Vibrio harveyi} SCOP: c.69.1.13 | Back alignment and structure |
|---|
Probab=99.96 E-value=8.7e-28 Score=208.98 Aligned_cols=230 Identities=14% Similarity=0.129 Sum_probs=140.5
Q ss_pred eEEe-CcEEEEEEEcCCCC---CCCceEEEEcCCCCCCccchhhHHHhhhCCCeEEEeCCCCC-CCCCCCCCCCCCCCCC
Q 022534 15 YIKS-GEYRWFVRETGSAD---SRLGTIVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGF-GFSDKPEKGYDDFDFT 89 (295)
Q Consensus 15 ~~~~-~~~~~~~~~~g~~~---~~~~~vv~lHG~~~~~~~w~~~~~~l~~~~~~via~Dl~G~-G~S~~~~~~~~~~~~~ 89 (295)
+++. +|.+++|...++.. +.+|+|||+||+++++..|..+++.|++.||+|+++|+||| |.|+.+.. .|+
T Consensus 11 ~i~~~dG~~l~~~~~~p~~~~~~~~~~VvllHG~g~~~~~~~~~~~~L~~~G~~Vi~~D~rGh~G~S~~~~~-----~~~ 85 (305)
T 1tht_A 11 VLRVNNGQELHVWETPPKENVPFKNNTILIASGFARRMDHFAGLAEYLSTNGFHVFRYDSLHHVGLSSGSID-----EFT 85 (305)
T ss_dssp EEEETTTEEEEEEEECCCTTSCCCSCEEEEECTTCGGGGGGHHHHHHHHTTTCCEEEECCCBCC-------------CCC
T ss_pred EEEcCCCCEEEEEEecCcccCCCCCCEEEEecCCccCchHHHHHHHHHHHCCCEEEEeeCCCCCCCCCCccc-----cee
Confidence 4444 78999998887532 23579999999999999999999999877999999999999 99986432 357
Q ss_pred HHHHHHHHHHHHHHh---CCCCceEEEEecccchH-HHHHHHHhCcCccceeEEEcCCCCCCCCCchhhhhhhcccchhh
Q 022534 90 ENEFHEELDKLLDVL---EVKYPFFLVVQGFLVGS-YGLTWALKNPSRISKLAILNSPLTASSPLPGLFQQLRIPLLGEF 165 (295)
Q Consensus 90 ~~~~~~~l~~~~~~l---~~~~~~~lv~~G~~~G~-~~~~~a~~~p~~v~~lil~~~p~~~~~~~~~~~~~~~~~~~~~~ 165 (295)
.+++++|+.++++.+ +.+ +++|+ |||+|+ +++.+|.+ | +|++++++++... ......... . .
T Consensus 86 ~~~~~~D~~~~~~~l~~~~~~-~~~lv--GhSmGG~iA~~~A~~-~-~v~~lvl~~~~~~----~~~~~~~~~-~---~- 151 (305)
T 1tht_A 86 MTTGKNSLCTVYHWLQTKGTQ-NIGLI--AASLSARVAYEVISD-L-ELSFLITAVGVVN----LRDTLEKAL-G---F- 151 (305)
T ss_dssp HHHHHHHHHHHHHHHHHTTCC-CEEEE--EETHHHHHHHHHTTT-S-CCSEEEEESCCSC----HHHHHHHHH-S---S-
T ss_pred hHHHHHHHHHHHHHHHhCCCC-ceEEE--EECHHHHHHHHHhCc-c-CcCEEEEecCchh----HHHHHHHHh-h---h-
Confidence 888999998888865 655 46676 777764 67777777 7 8999998753211 000000000 0 0
Q ss_pred hhhhHHHHHHHHHhCCCccccccccccccccccccCCchhHHHHHHHhcch---hhhhHhhhcCcCCCCCCCcEEEEEeC
Q 022534 166 TAQNAIMAERFIEAGSPYVLKLDKADVYRLPYLASSGPGFALLEAARKVNF---KDISSRIGAGFSSGSWDKPVLVAWGI 242 (295)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~P~l~i~G~ 242 (295)
.+... ...... . . .. ..........+........+ .+....+ .++++|+|+|+|+
T Consensus 152 ---------~~~~~-~~~~~~-~--~-~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l------~~i~~PvLii~G~ 209 (305)
T 1tht_A 152 ---------DYLSL-PIDELP-N--D-LD--FEGHKLGSEVFVRDCFEHHWDTLDSTLDKV------ANTSVPLIAFTAN 209 (305)
T ss_dssp ---------CGGGS-CGGGCC-S--E-EE--ETTEEEEHHHHHHHHHHTTCSSHHHHHHHH------TTCCSCEEEEEET
T ss_pred ---------hhhhc-chhhCc-c--c-cc--ccccccCHHHHHHHHHhccccchhhHHHHH------hhcCCCEEEEEeC
Confidence 00000 000000 0 0 00 00000000011111111111 1111122 2679999999999
Q ss_pred CCCCCCcchHHHHHhcCCC-CeEEEEecCCCCCCCCCChHHHHHH
Q 022534 243 SDKYLPQSVAEEFQKGNPN-VVKLQMIEGAGHMPQEDWPEKVVDG 286 (295)
Q Consensus 243 ~D~~~~~~~~~~~~~~~~~-~~~~~~i~~~gH~~~~e~p~~~~~~ 286 (295)
+|.++|++.++.+++.++. +++++++++|||+++ |+|+.+.+.
T Consensus 210 ~D~~vp~~~~~~l~~~i~~~~~~l~~i~~agH~~~-e~p~~~~~f 253 (305)
T 1tht_A 210 NDDWVKQEEVYDMLAHIRTGHCKLYSLLGSSHDLG-ENLVVLRNF 253 (305)
T ss_dssp TCTTSCHHHHHHHHTTCTTCCEEEEEETTCCSCTT-SSHHHHHHH
T ss_pred CCCccCHHHHHHHHHhcCCCCcEEEEeCCCCCchh-hCchHHHHH
Confidence 9999999999999987752 479999999999997 899854433
|
| >2b61_A Homoserine O-acetyltransferase; acyl-enzyme, aspartate pathway, coenzyme A, structure-functi studies, alpha-beta hydrolase fold; 1.65A {Haemophilus influenzae} SCOP: c.69.1.40 | Back alignment and structure |
|---|
Probab=99.96 E-value=2e-28 Score=217.68 Aligned_cols=268 Identities=12% Similarity=0.140 Sum_probs=164.3
Q ss_pred EEeCcEEEEEEEcCCCCCC-CceEEEEcCCCCCCcc---------chhhHHH---hhhCCCeEEEeCCCC-CCCCCCCCC
Q 022534 16 IKSGEYRWFVRETGSADSR-LGTIVFLHGAPSHSYS---------YRNVMSQ---MSDAGFHCFAPDWLG-FGFSDKPEK 81 (295)
Q Consensus 16 ~~~~~~~~~~~~~g~~~~~-~~~vv~lHG~~~~~~~---------w~~~~~~---l~~~~~~via~Dl~G-~G~S~~~~~ 81 (295)
++++|.+++|...|++++. .|+|||+||+++++.. |..+++. |++.||+|+++|+|| ||.|+.+..
T Consensus 39 ~~~~g~~l~y~~~g~~~~~~~~~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~g~~vi~~D~~G~~g~s~~~~~ 118 (377)
T 2b61_A 39 GKLSYINVAYQTYGTLNDEKNNAVLICHALTGDAEPYFDDGRDGWWQNFMGAGLALDTDRYFFISSNVLGGCKGTTGPSS 118 (377)
T ss_dssp CEECSEEEEEEEESCCCTTCCCEEEEECCTTCCSCSCCSSSCCCTTGGGEETTSSEETTTCEEEEECCTTCSSSSSCTTS
T ss_pred ceecceeEEEEecccccccCCCeEEEeCCCCCccccccccccchhhhhccCcccccccCCceEEEecCCCCCCCCCCCcc
Confidence 4568899999999865422 4799999999999998 9998863 855699999999999 799986532
Q ss_pred CC----CC-----CCCCHHHHHHHHHHHHHHhCCCCceEEEEecccch-HHHHHHHHhCcCccceeEEEcCCCCCCCCCc
Q 022534 82 GY----DD-----FDFTENEFHEELDKLLDVLEVKYPFFLVVQGFLVG-SYGLTWALKNPSRISKLAILNSPLTASSPLP 151 (295)
Q Consensus 82 ~~----~~-----~~~~~~~~~~~l~~~~~~l~~~~~~~lv~~G~~~G-~~~~~~a~~~p~~v~~lil~~~p~~~~~~~~ 151 (295)
.. .. ..|+++++++++.++++.+++++.++|+ |||+| .+++.+|.++|++|+++|+++++..... ..
T Consensus 119 ~~~~~g~~~~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~lv--GhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~-~~ 195 (377)
T 2b61_A 119 INPQTGKPYGSQFPNIVVQDIVKVQKALLEHLGISHLKAII--GGSFGGMQANQWAIDYPDFMDNIVNLCSSIYFSA-EA 195 (377)
T ss_dssp BCTTTSSBCGGGCCCCCHHHHHHHHHHHHHHTTCCCEEEEE--EETHHHHHHHHHHHHSTTSEEEEEEESCCSSCCH-HH
T ss_pred cCccccccccccCCcccHHHHHHHHHHHHHHcCCcceeEEE--EEChhHHHHHHHHHHCchhhheeEEeccCccccc-cc
Confidence 00 00 0468999999999999999988643266 77776 5688899999999999999976432210 00
Q ss_pred hhhhh-----h-hcccc-h-hhh----hhhHH----HH--------HHHHHhCCCcccc--------ccccccccc---c
Q 022534 152 GLFQQ-----L-RIPLL-G-EFT----AQNAI----MA--------ERFIEAGSPYVLK--------LDKADVYRL---P 196 (295)
Q Consensus 152 ~~~~~-----~-~~~~~-~-~~~----~~~~~----~~--------~~~~~~~~~~~~~--------~~~~~~~~~---~ 196 (295)
..+.. + ..+.. . .+. ..... .. ..+.......... ......... .
T Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (377)
T 2b61_A 196 IGFNHVMRQAVINDPNFNGGDYYEGTPPDQGLSIARMLGMLTYRTDLQLAKAFGRATKSDGSFWGDYFQVESYLSYQGKK 275 (377)
T ss_dssp HHHHHHHHHHHHTSTTCGGGCCTTSCCCHHHHHHHHHHHHHHHSCHHHHHHHTTTCBCTTCCTTSCCBHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHhcCccccccchhccCCCchhhhHHHHhhhhcccCHHHHHHHhccccccccccccchHHHHHHHHhhhhh
Confidence 00000 0 00000 0 000 00000 00 0000000000000 000000000 0
Q ss_pred ccccCCch-h-HHHHHHHhcch----hhhhHhhhcCcCCCCCCCcEEEEEeCCCCCCCc----chHHHHHhcCCCCeEEE
Q 022534 197 YLASSGPG-F-ALLEAARKVNF----KDISSRIGAGFSSGSWDKPVLVAWGISDKYLPQ----SVAEEFQKGNPNVVKLQ 266 (295)
Q Consensus 197 ~~~~~~~~-~-~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~~~----~~~~~~~~~~~~~~~~~ 266 (295)
+.....+. . .........+. .+.... ..++++|+|+|+|++|.++++ +.++.+++.+++ ++++
T Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~l~~~~~~-~~~~ 348 (377)
T 2b61_A 276 FLERFDANSYLHLLRALDMYDPSLGYENVKEA------LSRIKARYTLVSVTTDQLFKPIDLYKSKQLLEQSGVD-LHFY 348 (377)
T ss_dssp HHTTCCHHHHHHHHHHHHHCCTTTTSSCHHHH------HTTCCSEEEEEEETTCSSSCHHHHHHHHHHHHHTTCE-EEEE
T ss_pred hccccChhHHHHHHHHHhccccccccchHHhh------hhhcCCCEEEEecCCcccCCccchHHHHHHHHhcCCC-ceEE
Confidence 00000000 0 00011110000 000111 136789999999999999998 888999998886 7999
Q ss_pred Eec-CCCCCCCCCChHHHHHHHHHHHHh
Q 022534 267 MIE-GAGHMPQEDWPEKVVDGLRYFFLN 293 (295)
Q Consensus 267 ~i~-~~gH~~~~e~p~~~~~~i~~fl~~ 293 (295)
+++ ++||++++|+|+++++.|.+||.+
T Consensus 349 ~i~~~~gH~~~~e~p~~~~~~i~~fl~~ 376 (377)
T 2b61_A 349 EFPSDYGHDAFLVDYDQFEKRIRDGLAG 376 (377)
T ss_dssp EECCTTGGGHHHHCHHHHHHHHHHHHHT
T ss_pred EeCCCCCchhhhcCHHHHHHHHHHHHhc
Confidence 999 999999999999999999999975
|
| >4i19_A Epoxide hydrolase; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics, MCSG; 2.15A {Streptomyces carzinostaticus subsp} | Back alignment and structure |
|---|
Probab=99.96 E-value=8.7e-28 Score=215.64 Aligned_cols=123 Identities=17% Similarity=0.277 Sum_probs=103.7
Q ss_pred eeeEEeCcEEEEEEEcCCCCCCCceEEEEcCCCCCCccchhhHHHhhhC---------CCeEEEeCCCCCCCCCCCCCCC
Q 022534 13 GSYIKSGEYRWFVRETGSADSRLGTIVFLHGAPSHSYSYRNVMSQMSDA---------GFHCFAPDWLGFGFSDKPEKGY 83 (295)
Q Consensus 13 ~~~~~~~~~~~~~~~~g~~~~~~~~vv~lHG~~~~~~~w~~~~~~l~~~---------~~~via~Dl~G~G~S~~~~~~~ 83 (295)
..+++++|.++||...+++.+..++|||+||++++...|..+++.|.+. +|+|+++|+||||.|+.+...
T Consensus 70 ~~~~~i~g~~i~~~~~~~~~~~~~plll~HG~~~s~~~~~~~~~~L~~~~~~~~~~~~~~~vi~~dl~G~G~S~~~~~~- 148 (388)
T 4i19_A 70 QFTTEIDGATIHFLHVRSPEPDATPMVITHGWPGTPVEFLDIIGPLTDPRAHGGDPADAFHLVIPSLPGFGLSGPLKSA- 148 (388)
T ss_dssp EEEEEETTEEEEEEEECCSSTTCEEEEEECCTTCCGGGGHHHHHHHHCGGGGTSCGGGCEEEEEECCTTSGGGCCCSSC-
T ss_pred cEEEEECCeEEEEEEccCCCCCCCeEEEECCCCCCHHHHHHHHHHHhCcccccCCCCCCeEEEEEcCCCCCCCCCCCCC-
Confidence 3556889999999887654444689999999999999999999999864 899999999999999986531
Q ss_pred CCCCCCHHHHHHHHHHHHHHhCCCCceEEEEecccchH-HHHHHHHhCcCccceeEEEcC
Q 022534 84 DDFDFTENEFHEELDKLLDVLEVKYPFFLVVQGFLVGS-YGLTWALKNPSRISKLAILNS 142 (295)
Q Consensus 84 ~~~~~~~~~~~~~l~~~~~~l~~~~~~~lv~~G~~~G~-~~~~~a~~~p~~v~~lil~~~ 142 (295)
.++.+++++++.+++++++.++ ++++ |||+|+ ++..+|.++|++|++++++++
T Consensus 149 ---~~~~~~~a~~~~~l~~~lg~~~-~~l~--G~S~Gg~ia~~~a~~~p~~v~~lvl~~~ 202 (388)
T 4i19_A 149 ---GWELGRIAMAWSKLMASLGYER-YIAQ--GGDIGAFTSLLLGAIDPSHLAGIHVNLL 202 (388)
T ss_dssp ---CCCHHHHHHHHHHHHHHTTCSS-EEEE--ESTHHHHHHHHHHHHCGGGEEEEEESSC
T ss_pred ---CCCHHHHHHHHHHHHHHcCCCc-EEEE--eccHHHHHHHHHHHhChhhceEEEEecC
Confidence 4588999999999999999875 6666 677764 688899999999999998864
|
| >2vat_A Acetyl-COA--deacetylcephalosporin C acetyltransferase; A/B- hydrolase fold, acyltransferase, acetyl coenzyme A, antibiotic biosynthesis; HET: COA; 2.2A {Acremonium chrysogenum} SCOP: c.69.1.40 PDB: 2vav_A* 2vax_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=5.5e-28 Score=220.62 Aligned_cols=268 Identities=18% Similarity=0.207 Sum_probs=163.1
Q ss_pred EeCcEEEEEEEcCCCCC-CCceEEEEcCCCCCCcc---chhhHH---HhhhCCCeEEEeCCCC--CCCCCCCCCCCC-C-
Q 022534 17 KSGEYRWFVRETGSADS-RLGTIVFLHGAPSHSYS---YRNVMS---QMSDAGFHCFAPDWLG--FGFSDKPEKGYD-D- 85 (295)
Q Consensus 17 ~~~~~~~~~~~~g~~~~-~~~~vv~lHG~~~~~~~---w~~~~~---~l~~~~~~via~Dl~G--~G~S~~~~~~~~-~- 85 (295)
+.+|.+++|.+.|+.++ ..|+|||+||+++++.. |..+++ .|.+.+|+|+++|+|| ||.|+....... +
T Consensus 90 ~~~g~~l~y~~~G~~~~~~~p~vvllHG~~~~~~~~~~w~~~~~~~~~L~~~~~~Vi~~D~~G~~~G~S~~~~~~~~~~~ 169 (444)
T 2vat_A 90 ILRDVPVAYKSWGRMNVSRDNCVIVCHTLTSSAHVTSWWPTLFGQGRAFDTSRYFIICLNYLGSPFGSAGPCSPDPDAEG 169 (444)
T ss_dssp EEEEEEEEEEEESCCCTTSCCEEEEECCTTCCSCGGGTCGGGBSTTSSBCTTTCEEEEECCTTCSSSSSSTTSBCTTTC-
T ss_pred EecceeEEEEEecCCCCCCCCeEEEECCCCcccchhhHHHHhcCccchhhccCCEEEEecCCCCCCCCCCCCCCCccccc
Confidence 35788999999986432 24799999999999998 999886 5755689999999999 699874210000 0
Q ss_pred ---C-----CCCHHHHHHHHHHHHHHhCCCCceEEEEecccch-HHHHHHHHhCcCccceeEEEcCCCCCCCCCchhhhh
Q 022534 86 ---F-----DFTENEFHEELDKLLDVLEVKYPFFLVVQGFLVG-SYGLTWALKNPSRISKLAILNSPLTASSPLPGLFQQ 156 (295)
Q Consensus 86 ---~-----~~~~~~~~~~l~~~~~~l~~~~~~~lv~~G~~~G-~~~~~~a~~~p~~v~~lil~~~p~~~~~~~~~~~~~ 156 (295)
| .|+++++++++.+++++++++++++++ |||+| .+++.+|.++|++|+++|+++++.............
T Consensus 170 ~~~~~~~f~~~t~~~~a~dl~~ll~~l~~~~~~~lv--GhSmGG~ial~~A~~~p~~v~~lVli~~~~~~~~~~~~~~~~ 247 (444)
T 2vat_A 170 QRPYGAKFPRTTIRDDVRIHRQVLDRLGVRQIAAVV--GASMGGMHTLEWAFFGPEYVRKIVPIATSCRQSGWCAAWFET 247 (444)
T ss_dssp -CBCGGGCCCCCHHHHHHHHHHHHHHHTCCCEEEEE--EETHHHHHHHHHGGGCTTTBCCEEEESCCSBCCHHHHHHHHH
T ss_pred ccccccccccccHHHHHHHHHHHHHhcCCccceEEE--EECHHHHHHHHHHHhChHhhheEEEEeccccCCccchhHHHH
Confidence 1 368999999999999999988646666 67766 568889999999999999997644321100000000
Q ss_pred h-----hcccchh--h----hhhhHH----H--------HHHHHHhCCCcccc-c-------------------------
Q 022534 157 L-----RIPLLGE--F----TAQNAI----M--------AERFIEAGSPYVLK-L------------------------- 187 (295)
Q Consensus 157 ~-----~~~~~~~--~----~~~~~~----~--------~~~~~~~~~~~~~~-~------------------------- 187 (295)
. ..+.... + ...... + ...+.......... .
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 327 (444)
T 2vat_A 248 QRQCIYDDPKYLDGEYDVDDQPVRGLETARKIANLTYKSKPAMDERFHMAPGVQAGRNISSQDAKKEINGTDSGNSHRAG 327 (444)
T ss_dssp HHHHHHHSTTSGGGTCCTTSCCHHHHHHHHHHHHHHTSCHHHHHHHSCCCCCCC--------------------------
T ss_pred HHHHHhcCCccccccccccCCcccchhHHHhhhhccccChHHHHHHhccCcccccccccccccccccccccccccccccc
Confidence 0 0000000 0 000000 0 00010000000000 0
Q ss_pred ---cccccc-cc---cccccCCch-h-HHHHHHHhcchh-----hhhHhhhcCcCCCCCCCcEEEEEeCCCCCCCcchHH
Q 022534 188 ---DKADVY-RL---PYLASSGPG-F-ALLEAARKVNFK-----DISSRIGAGFSSGSWDKPVLVAWGISDKYLPQSVAE 253 (295)
Q Consensus 188 ---~~~~~~-~~---~~~~~~~~~-~-~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~~~~~~~ 253 (295)
.....+ +. .+....... + .....+...+.. +.... ..++++|+|+|+|++|.+++++.++
T Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~------l~~i~~PvLvi~G~~D~~~p~~~~~ 401 (444)
T 2vat_A 328 QPIEAVSSYLRYQAQKFAASFDANCYIAMTLKFDTHDISRGRAGSIPEA------LAMITQPALIICARSDGLYSFDEHV 401 (444)
T ss_dssp -CGGGHHHHHHHHHHHHHHSSCHHHHHHHHHHHHTCBTTTTTCSSHHHH------HTTCCSCEEEEECTTCSSSCHHHHH
T ss_pred CchhhHHHHHHHHHHHHhhccCccHHHHHHHHhhhhhccccccccHHHH------hhcCCCCEEEEEeCCCCCCCHHHHH
Confidence 000000 00 000000000 0 000000000000 01111 1367899999999999999999999
Q ss_pred HHHhcCCCCeEEEEec-CCCCCCCCCChHHHHHHHHHHHHh
Q 022534 254 EFQKGNPNVVKLQMIE-GAGHMPQEDWPEKVVDGLRYFFLN 293 (295)
Q Consensus 254 ~~~~~~~~~~~~~~i~-~~gH~~~~e~p~~~~~~i~~fl~~ 293 (295)
.+++.+++ +++++++ ++||++++|+|++|++.|.+||.+
T Consensus 402 ~l~~~~p~-~~~~~i~~~~GH~~~~e~p~~~~~~i~~fL~~ 441 (444)
T 2vat_A 402 EMGRSIPN-SRLCVVDTNEGHDFFVMEADKVNDAVRGFLDQ 441 (444)
T ss_dssp HHHHHSTT-EEEEECCCSCGGGHHHHTHHHHHHHHHHHHTC
T ss_pred HHHHHCCC-cEEEEeCCCCCcchHHhCHHHHHHHHHHHHHH
Confidence 99999997 7999999 999999999999999999999975
|
| >3b12_A Fluoroacetate dehalogenase; dehalogease, hydrolase; 1.20A {Burkholderia SP} PDB: 1y37_A | Back alignment and structure |
|---|
Probab=99.93 E-value=5.5e-31 Score=226.08 Aligned_cols=266 Identities=19% Similarity=0.250 Sum_probs=160.6
Q ss_pred eeeEEeCcEEEEEEEcCCCCCCCceEEEEcCCCCCCccchhhHHHhhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCCHHH
Q 022534 13 GSYIKSGEYRWFVRETGSADSRLGTIVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTENE 92 (295)
Q Consensus 13 ~~~~~~~~~~~~~~~~g~~~~~~~~vv~lHG~~~~~~~w~~~~~~l~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~ 92 (295)
..+++++|.+++|...|+ .|+|||+||+++++..|..+++.|+ .||+|+++|+||||.|+.+........|+.++
T Consensus 7 ~~~~~~~g~~~~~~~~g~----~p~vv~lHG~~~~~~~~~~~~~~l~-~g~~v~~~D~~G~G~s~~~~~~~~~~~~~~~~ 81 (304)
T 3b12_A 7 RRLVDVGDVTINCVVGGS----GPALLLLHGFPQNLHMWARVAPLLA-NEYTVVCADLRGYGGSSKPVGAPDHANYSFRA 81 (304)
Confidence 467888999999988773 3689999999999999999999998 59999999999999999763110012457789
Q ss_pred HHHHHHHHHHHhCCCCceEEEEecccch-HHHHHHHHhCcCccceeEEEcCCCCCCCCCc--hhhhh--h-----hcc--
Q 022534 93 FHEELDKLLDVLEVKYPFFLVVQGFLVG-SYGLTWALKNPSRISKLAILNSPLTASSPLP--GLFQQ--L-----RIP-- 160 (295)
Q Consensus 93 ~~~~l~~~~~~l~~~~~~~lv~~G~~~G-~~~~~~a~~~p~~v~~lil~~~p~~~~~~~~--~~~~~--~-----~~~-- 160 (295)
+++++.++++.++.++ ++++ |||+| .+++.+|.++|++|+++|+++++........ ..... . ..+
T Consensus 82 ~~~~l~~~l~~l~~~~-~~lv--G~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (304)
T 3b12_A 82 MASDQRELMRTLGFER-FHLV--GHARGGRTGHRMALDHPDSVLSLAVLDIIPTYVMFEEVDRFVARAYWHWYFLQQPAP 158 (304)
Confidence 9999999999998775 6666 77776 5678889999999999999876433211000 00000 0 000
Q ss_pred cchhhhhh-hHHHHHH-HHHhC--CCccccccccccccccccccCCch--hHHHHHHHhcchhhhhHhhhcCcCCCCCCC
Q 022534 161 LLGEFTAQ-NAIMAER-FIEAG--SPYVLKLDKADVYRLPYLASSGPG--FALLEAARKVNFKDISSRIGAGFSSGSWDK 234 (295)
Q Consensus 161 ~~~~~~~~-~~~~~~~-~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (295)
....+... ....... +.... .+..........+...+ ..++ .............+....... ...++++
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~i~~ 233 (304)
T 3b12_A 159 YPEKVIGADPDTFYEGCLFGWGATGADGFDPEQLEEYRKQW---RDPAAIHGSCCDYRAGGTIDFELDHGD--LGRQVQC 233 (304)
Confidence 00000000 0000000 00000 00000000000000000 0000 000000000000000000000 0236789
Q ss_pred cEEEEEeCCCCCC-CcchHHHHHhcCCCCeEEEEecCCCCCCCCCChHHHHHHHHHHHHh
Q 022534 235 PVLVAWGISDKYL-PQSVAEEFQKGNPNVVKLQMIEGAGHMPQEDWPEKVVDGLRYFFLN 293 (295)
Q Consensus 235 P~l~i~G~~D~~~-~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 293 (295)
|+|+|+|++|+.+ +......+.+..++ ++++++ ++||++++|+|+++++.|.+||.+
T Consensus 234 P~lii~G~~D~~~~~~~~~~~~~~~~~~-~~~~~i-~~gH~~~~e~p~~~~~~i~~fl~~ 291 (304)
T 3b12_A 234 PALVFSGSAGLMHSLFEMQVVWAPRLAN-MRFASL-PGGHFFVDRFPDDTARILREFLSD 291 (304)
Confidence 9999999999544 55666777777776 789999 999999999999999999999976
|
| >3llc_A Putative hydrolase; structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE PG4; 1.80A {Agrobacterium vitis} | Back alignment and structure |
|---|
Probab=99.95 E-value=2.1e-26 Score=194.31 Aligned_cols=246 Identities=19% Similarity=0.151 Sum_probs=162.9
Q ss_pred ccceeeEEe----CcEEEEEEEcCCCCCCCceEEEEcCCCCCCccchh--hHHHhhhCCCeEEEeCCCCCCCCCCCCCCC
Q 022534 10 REYGSYIKS----GEYRWFVRETGSADSRLGTIVFLHGAPSHSYSYRN--VMSQMSDAGFHCFAPDWLGFGFSDKPEKGY 83 (295)
Q Consensus 10 ~~~~~~~~~----~~~~~~~~~~g~~~~~~~~vv~lHG~~~~~~~w~~--~~~~l~~~~~~via~Dl~G~G~S~~~~~~~ 83 (295)
+....++++ +|.+++|...++.++.+|+|||+||++++...|.. +...|++.||+|+++|+||||.|+.+..
T Consensus 8 ~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~-- 85 (270)
T 3llc_A 8 PIETHAITVGQGSDARSIAALVRAPAQDERPTCIWLGGYRSDMTGTKALEMDDLAASLGVGAIRFDYSGHGASGGAFR-- 85 (270)
T ss_dssp CEEEEEEEESSGGGCEEEEEEEECCSSTTSCEEEEECCTTCCTTSHHHHHHHHHHHHHTCEEEEECCTTSTTCCSCGG--
T ss_pred CCCcceEEEeeccCcceEEEEeccCCCCCCCeEEEECCCccccccchHHHHHHHHHhCCCcEEEeccccCCCCCCccc--
Confidence 455678888 99999998665443346899999999998777654 6777766699999999999999986432
Q ss_pred CCCCCCHHHHHHHHHHHHHHhCCCCceEEEEecccch-HHHHHHHHh---Cc---CccceeEEEcCCCCCCCCCchhhhh
Q 022534 84 DDFDFTENEFHEELDKLLDVLEVKYPFFLVVQGFLVG-SYGLTWALK---NP---SRISKLAILNSPLTASSPLPGLFQQ 156 (295)
Q Consensus 84 ~~~~~~~~~~~~~l~~~~~~l~~~~~~~lv~~G~~~G-~~~~~~a~~---~p---~~v~~lil~~~p~~~~~~~~~~~~~ 156 (295)
.++.+++++++.++++.++.+ +++++ |||+| .+++.+|.+ +| ++|+++++++++... ...
T Consensus 86 ---~~~~~~~~~d~~~~~~~l~~~-~~~l~--G~S~Gg~~a~~~a~~~~~~p~~~~~v~~~il~~~~~~~-------~~~ 152 (270)
T 3llc_A 86 ---DGTISRWLEEALAVLDHFKPE-KAILV--GSSMGGWIALRLIQELKARHDNPTQVSGMVLIAPAPDF-------TSD 152 (270)
T ss_dssp ---GCCHHHHHHHHHHHHHHHCCS-EEEEE--EETHHHHHHHHHHHHHHTCSCCSCEEEEEEEESCCTTH-------HHH
T ss_pred ---cccHHHHHHHHHHHHHHhccC-CeEEE--EeChHHHHHHHHHHHHHhccccccccceeEEecCcccc-------hhh
Confidence 357899999999999999855 46776 67765 568888888 99 999999998653321 010
Q ss_pred hhcccchhhhhhhHHHHHHHHHhCCCccccccccccccccccccCCchhHHHHHHHhcchhhhhHhhhcCcCCCCCCCcE
Q 022534 157 LRIPLLGEFTAQNAIMAERFIEAGSPYVLKLDKADVYRLPYLASSGPGFALLEAARKVNFKDISSRIGAGFSSGSWDKPV 236 (295)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~ 236 (295)
.....+. ......+.................. ....+.......... . ...++++|+
T Consensus 153 ~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~-------~--~~~~~~~P~ 209 (270)
T 3llc_A 153 LIEPLLG------DRERAELAENGYFEEVSEYSPEPNI--------FTRALMEDGRANRVM-------A--GMIDTGCPV 209 (270)
T ss_dssp TTGGGCC------HHHHHHHHHHSEEEECCTTCSSCEE--------EEHHHHHHHHHTCCT-------T--SCCCCCSCE
T ss_pred hhhhhhh------hhhhhhhhccCcccChhhcccchhH--------HHHHHHhhhhhhhhh-------h--hhhcCCCCE
Confidence 0000000 0001111111100000000000000 001122221111100 0 123678999
Q ss_pred EEEEeCCCCCCCcchHHHHHhcCCC-CeEEEEecCCCCCCC-CCChHHHHHHHHHHHHh
Q 022534 237 LVAWGISDKYLPQSVAEEFQKGNPN-VVKLQMIEGAGHMPQ-EDWPEKVVDGLRYFFLN 293 (295)
Q Consensus 237 l~i~G~~D~~~~~~~~~~~~~~~~~-~~~~~~i~~~gH~~~-~e~p~~~~~~i~~fl~~ 293 (295)
++++|++|.+++.+.+..+.+.+++ .+++++++++||... .+.++++.+.|.+||..
T Consensus 210 l~i~g~~D~~v~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~ 268 (270)
T 3llc_A 210 HILQGMADPDVPYQHALKLVEHLPADDVVLTLVRDGDHRLSRPQDIDRMRNAIRAMIEP 268 (270)
T ss_dssp EEEEETTCSSSCHHHHHHHHHTSCSSSEEEEEETTCCSSCCSHHHHHHHHHHHHHHHC-
T ss_pred EEEecCCCCCCCHHHHHHHHHhcCCCCeeEEEeCCCcccccccccHHHHHHHHHHHhcC
Confidence 9999999999999999999988875 279999999999654 57799999999999975
|
| >3g02_A Epoxide hydrolase; alpha/beta hydrolase fold, enantioselective, mutant, directed evolution; 1.50A {Aspergillus niger} SCOP: c.69.1.11 PDB: 1qo7_A 3g0i_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=7.1e-27 Score=210.73 Aligned_cols=125 Identities=17% Similarity=0.186 Sum_probs=100.6
Q ss_pred eeeEEeCcEEEEEEEcCCCCCCCceEEEEcCCCCCCccchhhHHHhhh------CCCeEEEeCCCCCCCCCCCCCCCCCC
Q 022534 13 GSYIKSGEYRWFVRETGSADSRLGTIVFLHGAPSHSYSYRNVMSQMSD------AGFHCFAPDWLGFGFSDKPEKGYDDF 86 (295)
Q Consensus 13 ~~~~~~~~~~~~~~~~g~~~~~~~~vv~lHG~~~~~~~w~~~~~~l~~------~~~~via~Dl~G~G~S~~~~~~~~~~ 86 (295)
..+++++|.++||...|++.+..+||||+||++++...|..+++.|++ .||+||++|+||||+|+.+... .
T Consensus 87 ~~~~~i~g~~i~~~~~~~~~~~~~pllllHG~~~s~~~~~~~~~~L~~~~~~~~~gf~vv~~DlpG~G~S~~~~~~---~ 163 (408)
T 3g02_A 87 QFTTEIEGLTIHFAALFSEREDAVPIALLHGWPGSFVEFYPILQLFREEYTPETLPFHLVVPSLPGYTFSSGPPLD---K 163 (408)
T ss_dssp EEEEEETTEEEEEEEECCSCTTCEEEEEECCSSCCGGGGHHHHHHHHHHCCTTTCCEEEEEECCTTSTTSCCSCSS---S
T ss_pred CEEEEECCEEEEEEEecCCCCCCCeEEEECCCCCcHHHHHHHHHHHhcccccccCceEEEEECCCCCCCCCCCCCC---C
Confidence 456778999999999886554568999999999999999999999986 4799999999999999986421 2
Q ss_pred CCCHHHHHHHHHHHHHHhCCCCceEEEEecccch-HHHHHHHHhCcCccceeEEEcCC
Q 022534 87 DFTENEFHEELDKLLDVLEVKYPFFLVVQGFLVG-SYGLTWALKNPSRISKLAILNSP 143 (295)
Q Consensus 87 ~~~~~~~~~~l~~~~~~l~~~~~~~lv~~G~~~G-~~~~~~a~~~p~~v~~lil~~~p 143 (295)
.++.+++++++.+++++++.+++++++ |||+| .++..+|.++|+. .++++..++
T Consensus 164 ~~~~~~~a~~~~~l~~~lg~~~~~~lv--G~S~Gg~ia~~~A~~~p~~-~~~~l~~~~ 218 (408)
T 3g02_A 164 DFGLMDNARVVDQLMKDLGFGSGYIIQ--GGDIGSFVGRLLGVGFDAC-KAVHLNFCN 218 (408)
T ss_dssp CCCHHHHHHHHHHHHHHTTCTTCEEEE--ECTHHHHHHHHHHHHCTTE-EEEEESCCC
T ss_pred CCCHHHHHHHHHHHHHHhCCCCCEEEe--CCCchHHHHHHHHHhCCCc-eEEEEeCCC
Confidence 468899999999999999986346666 66776 4688889999764 455554333
|
| >1k8q_A Triacylglycerol lipase, gastric; APHA beta hydrolase fold, hydrolase; HET: NAG BOG C11; 2.70A {Canis lupus familiaris} SCOP: c.69.1.6 PDB: 1hlg_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=2.4e-26 Score=203.49 Aligned_cols=274 Identities=17% Similarity=0.211 Sum_probs=160.4
Q ss_pred eeEEeCcEEEEEEEcCCCC------CCCceEEEEcCCCCCCccchhhHH------HhhhCCCeEEEeCCCCCCCCCCCC-
Q 022534 14 SYIKSGEYRWFVRETGSAD------SRLGTIVFLHGAPSHSYSYRNVMS------QMSDAGFHCFAPDWLGFGFSDKPE- 80 (295)
Q Consensus 14 ~~~~~~~~~~~~~~~g~~~------~~~~~vv~lHG~~~~~~~w~~~~~------~l~~~~~~via~Dl~G~G~S~~~~- 80 (295)
.+.+.+|..+++....++. ..+|+|||+||+++++..|..+++ .|+++||+|+++|+||||.|+.+.
T Consensus 31 ~~~~~dG~~l~~~~~~~~~~~~~~~~~~~~vvl~HG~~~~~~~~~~~~~~~~~a~~l~~~G~~vi~~D~~G~G~S~~~~~ 110 (377)
T 1k8q_A 31 EVVTEDGYILGIDRIPYGRKNSENIGRRPVAFLQHGLLASATNWISNLPNNSLAFILADAGYDVWLGNSRGNTWARRNLY 110 (377)
T ss_dssp EEECTTSEEEEEEEECSCSSCCTTTTTCCEEEEECCTTCCGGGGSSSCTTTCHHHHHHHTTCEEEECCCTTSTTSCEESS
T ss_pred EeEcCCCCEEEEEEecCCCCCccccCCCCeEEEECCCCCchhhhhcCCCcccHHHHHHHCCCCEEEecCCCCCCCCCCCC
Confidence 3445578999887764322 246899999999999999987776 888879999999999999998631
Q ss_pred --CCCCCC-CCCHHHHHH-HHHHHHH----HhCCCCceEEEEecccch-HHHHHHHHhCcC---ccceeEEEcCCCCCCC
Q 022534 81 --KGYDDF-DFTENEFHE-ELDKLLD----VLEVKYPFFLVVQGFLVG-SYGLTWALKNPS---RISKLAILNSPLTASS 148 (295)
Q Consensus 81 --~~~~~~-~~~~~~~~~-~l~~~~~----~l~~~~~~~lv~~G~~~G-~~~~~~a~~~p~---~v~~lil~~~p~~~~~ 148 (295)
+....+ .|+.+++++ |+.++++ +++.++ ++++ |||+| .+++.+|.++|+ +|+++|+++++.....
T Consensus 111 ~~~~~~~~~~~~~~~~~~~D~~~~i~~~~~~~~~~~-~~lv--G~S~Gg~ia~~~a~~~p~~~~~v~~lvl~~~~~~~~~ 187 (377)
T 1k8q_A 111 YSPDSVEFWAFSFDEMAKYDLPATIDFILKKTGQDK-LHYV--GHSQGTTIGFIAFSTNPKLAKRIKTFYALAPVATVKY 187 (377)
T ss_dssp SCTTSTTTTCCCHHHHHHTHHHHHHHHHHHHHCCSC-EEEE--EETHHHHHHHHHHHHCHHHHTTEEEEEEESCCSCCSS
T ss_pred CCCCcccccCccHHHHHhhhHHHHHHHHHHhcCcCc-eEEE--EechhhHHHHHHHhcCchhhhhhhEEEEeCCchhccc
Confidence 110011 568888888 7777655 466664 6676 77766 567888999999 8999999875433211
Q ss_pred CCchhhhhhhc-------ccch--hhhhhhH----------------HHHHH---HHHhCCCcccccccccccccccccc
Q 022534 149 PLPGLFQQLRI-------PLLG--EFTAQNA----------------IMAER---FIEAGSPYVLKLDKADVYRLPYLAS 200 (295)
Q Consensus 149 ~~~~~~~~~~~-------~~~~--~~~~~~~----------------~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (295)
.......... ...+ .+..... ..... +........+.......+.... .
T Consensus 188 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~ 264 (377)
T 1k8q_A 188 -TETLINKLMLVPSFLFKLIFGNKIFYPHHFFDQFLATEVCSRETVDLLCSNALFIICGFDTMNLNMSRLDVYLSHN--P 264 (377)
T ss_dssp -CCSGGGGGGTSCHHHHHHHSCSSEESCCCHHHHHHHHHTTTBTTTHHHHHHHHHHHHCCCGGGSCGGGHHHHHTTC--C
T ss_pred -chhHHHHHHhhccHHHHhhcCccccCcHHHHHHHHHHHhhCCccHHHHHHHHHHHhcCCCcccCCHHHHHHHhccC--C
Confidence 1111100000 0000 0000000 00000 0000000000000000000000 0
Q ss_pred CCch-hHH---HHHHHhcchhh--------hhHhhhc----CcCCCCCCCcEEEEEeCCCCCCCcchHHHHHhcCCCCeE
Q 022534 201 SGPG-FAL---LEAARKVNFKD--------ISSRIGA----GFSSGSWDKPVLVAWGISDKYLPQSVAEEFQKGNPNVVK 264 (295)
Q Consensus 201 ~~~~-~~~---~~~~~~~~~~~--------~~~~~~~----~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~ 264 (295)
.... ..+ ........+.. ....... .....++++|+|+|+|++|.+++++.+..+++.+++ .+
T Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~-~~ 343 (377)
T 1k8q_A 265 AGTSVQNVLHWSQAVKSGKFQAFDWGSPVQNMMHYHQSMPPYYNLTDMHVPIAVWNGGNDLLADPHDVDLLLSKLPN-LI 343 (377)
T ss_dssp CCEEHHHHHHHHHHHHHCSCBCCCCSSHHHHHHHHSSSSCCBCCGGGCCSCEEEEEETTCSSSCHHHHHHHHTTCTT-EE
T ss_pred CCccHHHHHHHHHHHhcCCeeeccCCcchhhHHHcCCCCCcccCHhhCCCCEEEEEeCCCcccCHHHHHHHHHhCcC-cc
Confidence 0000 000 01100000000 0000000 011236789999999999999999999999999987 56
Q ss_pred -EEEecCCCCCCCC---CChHHHHHHHHHHHHhc
Q 022534 265 -LQMIEGAGHMPQE---DWPEKVVDGLRYFFLNY 294 (295)
Q Consensus 265 -~~~i~~~gH~~~~---e~p~~~~~~i~~fl~~~ 294 (295)
+++++++||++++ |+|+++++.|.+||..+
T Consensus 344 ~~~~~~~~gH~~~~~~~~~~~~~~~~i~~fl~~~ 377 (377)
T 1k8q_A 344 YHRKIPPYNHLDFIWAMDAPQAVYNEIVSMMGTD 377 (377)
T ss_dssp EEEEETTCCTTHHHHCTTHHHHTHHHHHHHHHTC
T ss_pred cEEecCCCCceEEEecCCcHHHHHHHHHHHhccC
Confidence 9999999999986 89999999999999763
|
| >3l80_A Putative uncharacterized protein SMU.1393C; alpha/beta hydrolase fold, carboxylesterase, Ser- hydrolase; 2.00A {Streptococcus mutans} | Back alignment and structure |
|---|
Probab=99.95 E-value=2e-27 Score=203.73 Aligned_cols=246 Identities=12% Similarity=0.096 Sum_probs=153.0
Q ss_pred eeeEEeCcEEEEEEEcCCCCCCCceEEEEcCC--CCCCccchhhHHHhhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCCH
Q 022534 13 GSYIKSGEYRWFVRETGSADSRLGTIVFLHGA--PSHSYSYRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTE 90 (295)
Q Consensus 13 ~~~~~~~~~~~~~~~~g~~~~~~~~vv~lHG~--~~~~~~w~~~~~~l~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~ 90 (295)
..++++++..++|.. ++ .+|+|||+||+ +++...|..+++.|+ .+|+|+++|+||||.|+.+.. ..++.
T Consensus 23 ~~~v~~~~~~~~~~~-~~---~~p~vv~lHG~G~~~~~~~~~~~~~~L~-~~~~vi~~D~~G~G~S~~~~~----~~~~~ 93 (292)
T 3l80_A 23 KEMVNTLLGPIYTCH-RE---GNPCFVFLSGAGFFSTADNFANIIDKLP-DSIGILTIDAPNSGYSPVSNQ----ANVGL 93 (292)
T ss_dssp EEEECCTTSCEEEEE-EC---CSSEEEEECCSSSCCHHHHTHHHHTTSC-TTSEEEEECCTTSTTSCCCCC----TTCCH
T ss_pred cceEEecCceEEEec-CC---CCCEEEEEcCCCCCcHHHHHHHHHHHHh-hcCeEEEEcCCCCCCCCCCCc----ccccH
Confidence 456777666777653 22 23799999954 667889999999998 499999999999999994432 24688
Q ss_pred HHHHHHHHHHHHHhCCCCceEEEEecccch-HHHHHHHHhCcCccceeEEEcCCCCC------CC-CCchhhhhhhcccc
Q 022534 91 NEFHEELDKLLDVLEVKYPFFLVVQGFLVG-SYGLTWALKNPSRISKLAILNSPLTA------SS-PLPGLFQQLRIPLL 162 (295)
Q Consensus 91 ~~~~~~l~~~~~~l~~~~~~~lv~~G~~~G-~~~~~~a~~~p~~v~~lil~~~p~~~------~~-~~~~~~~~~~~~~~ 162 (295)
+++++++.++++.++.+ +++|+ |||+| .+++.+|.++|++|+++|+++++... .. ..+......+ ..
T Consensus 94 ~~~~~~l~~~l~~~~~~-~~~lv--GhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~--~~ 168 (292)
T 3l80_A 94 RDWVNAILMIFEHFKFQ-SYLLC--VHSIGGFAALQIMNQSSKACLGFIGLEPTTVMIYRAGFSSDLYPQLALRRQ--KL 168 (292)
T ss_dssp HHHHHHHHHHHHHSCCS-EEEEE--EETTHHHHHHHHHHHCSSEEEEEEEESCCCHHHHHHCTTSSSSHHHHHHHH--TC
T ss_pred HHHHHHHHHHHHHhCCC-CeEEE--EEchhHHHHHHHHHhCchheeeEEEECCCCcchhhhccccccchhHHHHHH--HH
Confidence 99999999999999887 46777 67766 56888999999999999999743210 00 0111000000 00
Q ss_pred hhhhhhh-H--HHHHHHHHhCCCccccccccccccccccccCCchhHHHHHHHhcch-------hhhh-HhhhcCcCCCC
Q 022534 163 GEFTAQN-A--IMAERFIEAGSPYVLKLDKADVYRLPYLASSGPGFALLEAARKVNF-------KDIS-SRIGAGFSSGS 231 (295)
Q Consensus 163 ~~~~~~~-~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~-~~~~~~~~~~~ 231 (295)
....... . ....+++. +..... ..... ............ .... ..... ..+.
T Consensus 169 ~~~~~~~~~~~~~~~~~~~---~~~~~~-~~~~~-----------~~~~~~~~~~~~l~~~~~~~~~~~~~~~~--~l~~ 231 (292)
T 3l80_A 169 KTAADRLNYLKDLSRSHFS---SQQFKQ-LWRGY-----------DYCQRQLNDVQSLPDFKIRLALGEEDFKT--GISE 231 (292)
T ss_dssp CSHHHHHHHHHHHHHHHSC---HHHHHH-HHHHH-----------HHHHHHHHTTTTSTTCCSSCCCCGGGGCC--CCCT
T ss_pred hccCchhhhHhhccccccC---HHHHHH-hHHHH-----------HHHHHHHHhhhhccccchhhhhcchhhhh--ccCC
Confidence 0000000 0 00000000 000000 00000 000000000000 0000 00001 1224
Q ss_pred CCCcEEEEEeCCCCCCCcchHHHHHhcCCCCeEEEEecCCCCCCCCCChHHHHHHHHHHHHhc
Q 022534 232 WDKPVLVAWGISDKYLPQSVAEEFQKGNPNVVKLQMIEGAGHMPQEDWPEKVVDGLRYFFLNY 294 (295)
Q Consensus 232 ~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~ 294 (295)
++|+|+|+|++|.+++++ + .+.+.+++ .+ ++++++||++++|+|+++++.|.+||+.+
T Consensus 232 -~~P~lii~g~~D~~~~~~-~-~~~~~~~~-~~-~~~~~~gH~~~~e~p~~~~~~i~~fl~~~ 289 (292)
T 3l80_A 232 -KIPSIVFSESFREKEYLE-S-EYLNKHTQ-TK-LILCGQHHYLHWSETNSILEKVEQLLSNH 289 (292)
T ss_dssp -TSCEEEEECGGGHHHHHT-S-TTCCCCTT-CE-EEECCSSSCHHHHCHHHHHHHHHHHHHTC
T ss_pred -CCCEEEEEccCccccchH-H-HHhccCCC-ce-eeeCCCCCcchhhCHHHHHHHHHHHHHhc
Confidence 899999999999998887 6 77788887 57 99999999999999999999999999864
|
| >3rm3_A MGLP, thermostable monoacylglycerol lipase; alpha/beta hydrolase fold, hydrolase; 1.20A {Bacillus SP} PDB: 3rli_A | Back alignment and structure |
|---|
Probab=99.95 E-value=5.7e-27 Score=198.65 Aligned_cols=244 Identities=18% Similarity=0.260 Sum_probs=161.5
Q ss_pred cccceeeEEeCcEEEEEEEcCCCCCCCceEEEEcCCCCCCccchhhHHHhhhCCCeEEEeCCCCCCCCCCCCCCCCCCCC
Q 022534 9 GREYGSYIKSGEYRWFVRETGSADSRLGTIVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDF 88 (295)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~vv~lHG~~~~~~~w~~~~~~l~~~~~~via~Dl~G~G~S~~~~~~~~~~~~ 88 (295)
.+-...++..+|.+++|.+ | .+|+|||+||++++...|..+++.|+++||+|+++|+||||.|+.+.. .+
T Consensus 19 ~~m~~~~~~~~g~~~~~~~-g----~~~~vv~~HG~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~-----~~ 88 (270)
T 3rm3_A 19 SHMSEQYPVLSGAEPFYAE-N----GPVGVLLVHGFTGTPHSMRPLAEAYAKAGYTVCLPRLKGHGTHYEDME-----RT 88 (270)
T ss_dssp --CCCSSCCCTTCCCEEEC-C----SSEEEEEECCTTCCGGGTHHHHHHHHHTTCEEEECCCTTCSSCHHHHH-----TC
T ss_pred cccCCCccCCCCCcccccC-C----CCeEEEEECCCCCChhHHHHHHHHHHHCCCEEEEeCCCCCCCCccccc-----cC
Confidence 3444567778899998874 3 247999999999999999999999998899999999999999985322 34
Q ss_pred CHHHHHHHHHHHHHHhC--CCCceEEEEecccch-HHHHHHHHhCcCccceeEEEcCCCCCCCCCchhhhhhh-cccchh
Q 022534 89 TENEFHEELDKLLDVLE--VKYPFFLVVQGFLVG-SYGLTWALKNPSRISKLAILNSPLTASSPLPGLFQQLR-IPLLGE 164 (295)
Q Consensus 89 ~~~~~~~~l~~~~~~l~--~~~~~~lv~~G~~~G-~~~~~~a~~~p~~v~~lil~~~p~~~~~~~~~~~~~~~-~~~~~~ 164 (295)
+.+++++|+.++++.+. .+ +++++ |||+| .+++.+|.++|+ |+++++++++... +....... .....
T Consensus 89 ~~~~~~~d~~~~i~~l~~~~~-~i~l~--G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~----~~~~~~~~~~~~~~- 159 (270)
T 3rm3_A 89 TFHDWVASVEEGYGWLKQRCQ-TIFVT--GLSMGGTLTLYLAEHHPD-ICGIVPINAAVDI----PAIAAGMTGGGELP- 159 (270)
T ss_dssp CHHHHHHHHHHHHHHHHTTCS-EEEEE--EETHHHHHHHHHHHHCTT-CCEEEEESCCSCC----HHHHHHSCC---CC-
T ss_pred CHHHHHHHHHHHHHHHHhhCC-cEEEE--EEcHhHHHHHHHHHhCCC-ccEEEEEcceecc----cccccchhcchhHH-
Confidence 77899999999999986 44 46676 67766 467888999999 9999998754432 11100000 00000
Q ss_pred hhhhhHHHHHHHHHhCCCccccccccccccccccccCCchhHHHHHHHhcchhhhhHhhhcCcCCCCCCCcEEEEEeCCC
Q 022534 165 FTAQNAIMAERFIEAGSPYVLKLDKADVYRLPYLASSGPGFALLEAARKVNFKDISSRIGAGFSSGSWDKPVLVAWGISD 244 (295)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D 244 (295)
++.....+......... ..+. ..+...+...... ..+....+ .++++|+|+++|++|
T Consensus 160 ----------~~~~~~~~~~~~~~~~~---~~~~--~~~~~~~~~~~~~--~~~~~~~~------~~~~~P~lii~G~~D 216 (270)
T 3rm3_A 160 ----------RYLDSIGSDLKNPDVKE---LAYE--KTPTASLLQLARL--MAQTKAKL------DRIVCPALIFVSDED 216 (270)
T ss_dssp ----------SEEECCCCCCSCTTCCC---CCCS--EEEHHHHHHHHHH--HHHHHHTG------GGCCSCEEEEEETTC
T ss_pred ----------HHHHHhCccccccchHh---hccc--ccChhHHHHHHHH--HHHHHhhh------hhcCCCEEEEECCCC
Confidence 00000000000000000 0000 0000011111000 01111111 256899999999999
Q ss_pred CCCCcchHHHHHhcCCC-CeEEEEecCCCCCCCCCCh-HHHHHHHHHHHHhc
Q 022534 245 KYLPQSVAEEFQKGNPN-VVKLQMIEGAGHMPQEDWP-EKVVDGLRYFFLNY 294 (295)
Q Consensus 245 ~~~~~~~~~~~~~~~~~-~~~~~~i~~~gH~~~~e~p-~~~~~~i~~fl~~~ 294 (295)
.+++++.+..+.+.+++ ++++++++++||.++.++| +++.+.|.+||.+.
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~~ 268 (270)
T 3rm3_A 217 HVVPPGNADIIFQGISSTEKEIVRLRNSYHVATLDYDQPMIIERSLEFFAKH 268 (270)
T ss_dssp SSSCTTHHHHHHHHSCCSSEEEEEESSCCSCGGGSTTHHHHHHHHHHHHHHH
T ss_pred cccCHHHHHHHHHhcCCCcceEEEeCCCCcccccCccHHHHHHHHHHHHHhc
Confidence 99999999999988875 3599999999999999987 99999999999875
|
| >1imj_A CIB, CCG1-interacting factor B; alpha/beta hydrolase, CCG1 interactor; 2.20A {Homo sapiens} SCOP: c.69.1.23 | Back alignment and structure |
|---|
Probab=99.94 E-value=6.9e-27 Score=190.95 Aligned_cols=197 Identities=23% Similarity=0.313 Sum_probs=155.9
Q ss_pred cceeeEEeCcEEEEEEEcCCCC-CCCceEEEEcCCCCCCccchh--hHHHhhhCCCeEEEeCCCCCCCCCCCCCCCCCCC
Q 022534 11 EYGSYIKSGEYRWFVRETGSAD-SRLGTIVFLHGAPSHSYSYRN--VMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFD 87 (295)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~g~~~-~~~~~vv~lHG~~~~~~~w~~--~~~~l~~~~~~via~Dl~G~G~S~~~~~~~~~~~ 87 (295)
....+++.+|.+++|..+++.. +.+|+||++||++++...|.. +++.|+++||+|+++|+||||.|+.+...
T Consensus 7 ~~~~~~~~~g~~l~~~~~~p~~~~~~~~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~g~s~~~~~~----- 81 (210)
T 1imj_A 7 QREGTIQVQGQALFFREALPGSGQARFSVLLLHGIRFSSETWQNLGTLHRLAQAGYRAVAIDLPGLGHSKEAAAP----- 81 (210)
T ss_dssp ECCCCEEETTEEECEEEEECSSSCCSCEEEECCCTTCCHHHHHHHTHHHHHHHTTCEEEEECCTTSGGGTTSCCS-----
T ss_pred cccceEeeCCeEEEEEEeCCCCCCCCceEEEECCCCCccceeecchhHHHHHHCCCeEEEecCCCCCCCCCCCCc-----
Confidence 3456788899999999886432 346899999999999999998 58899888999999999999999876422
Q ss_pred CCHHHHH--HHHHHHHHHhCCCCceEEEEecccch-HHHHHHHHhCcCccceeEEEcCCCCCCCCCchhhhhhhcccchh
Q 022534 88 FTENEFH--EELDKLLDVLEVKYPFFLVVQGFLVG-SYGLTWALKNPSRISKLAILNSPLTASSPLPGLFQQLRIPLLGE 164 (295)
Q Consensus 88 ~~~~~~~--~~l~~~~~~l~~~~~~~lv~~G~~~G-~~~~~~a~~~p~~v~~lil~~~p~~~~~~~~~~~~~~~~~~~~~ 164 (295)
++.++++ +++.++++.++.++ ++++ |||+| .+++.+|.++|++++++++++++... .
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~-~~l~--G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~-----------------~ 141 (210)
T 1imj_A 82 APIGELAPGSFLAAVVDALELGP-PVVI--SPSLSGMYSLPFLTAPGSQLPGFVPVAPICTD-----------------K 141 (210)
T ss_dssp SCTTSCCCTHHHHHHHHHHTCCS-CEEE--EEGGGHHHHHHHHTSTTCCCSEEEEESCSCGG-----------------G
T ss_pred chhhhcchHHHHHHHHHHhCCCC-eEEE--EECchHHHHHHHHHhCccccceEEEeCCCccc-----------------c
Confidence 2334555 89999999998765 6666 67766 46777888999999999988642110 0
Q ss_pred hhhhhHHHHHHHHHhCCCccccccccccccccccccCCchhHHHHHHHhcchhhhhHhhhcCcCCCCCCCcEEEEEeCCC
Q 022534 165 FTAQNAIMAERFIEAGSPYVLKLDKADVYRLPYLASSGPGFALLEAARKVNFKDISSRIGAGFSSGSWDKPVLVAWGISD 244 (295)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D 244 (295)
+ . . .... ++++|+++++|++|
T Consensus 142 ~------------------------------~-----------~---------~~~~---------~~~~p~l~i~g~~D 162 (210)
T 1imj_A 142 I------------------------------N-----------A---------ANYA---------SVKTPALIVYGDQD 162 (210)
T ss_dssp S------------------------------C-----------H---------HHHH---------TCCSCEEEEEETTC
T ss_pred c------------------------------c-----------c---------hhhh---------hCCCCEEEEEcCcc
Confidence 0 0 0 0000 45799999999999
Q ss_pred CCCCcchHHHHHhcCCCCeEEEEecCCCCCCCCCChHHHHHHHHHHHHhc
Q 022534 245 KYLPQSVAEEFQKGNPNVVKLQMIEGAGHMPQEDWPEKVVDGLRYFFLNY 294 (295)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~ 294 (295)
+ ++.+.++.+ +..++ +++++++++||.++.++|+++.+.|.+|+.+.
T Consensus 163 ~-~~~~~~~~~-~~~~~-~~~~~~~~~~H~~~~~~~~~~~~~i~~fl~~~ 209 (210)
T 1imj_A 163 P-MGQTSFEHL-KQLPN-HRVLIMKGAGHPCYLDKPEEWHTGLLDFLQGL 209 (210)
T ss_dssp H-HHHHHHHHH-TTSSS-EEEEEETTCCTTHHHHCHHHHHHHHHHHHHTC
T ss_pred c-CCHHHHHHH-hhCCC-CCEEEecCCCcchhhcCHHHHHHHHHHHHHhc
Confidence 9 988888888 77876 79999999999999999999999999999875
|
| >3bdi_A Uncharacterized protein TA0194; NP_393672.1, predicted CIB-like hydrolase, structural genomi center for structural genomics; HET: MSE; 1.45A {Thermoplasma acidophilum dsm 1728} | Back alignment and structure |
|---|
Probab=99.94 E-value=1.5e-25 Score=182.26 Aligned_cols=194 Identities=22% Similarity=0.372 Sum_probs=156.0
Q ss_pred eeeEEeCcEEEEEEEcCCCCCCCceEEEEcCCCCCCccchh--hHHHhhhCCCeEEEeCCCCCCCC---CCCCCCCCCCC
Q 022534 13 GSYIKSGEYRWFVRETGSADSRLGTIVFLHGAPSHSYSYRN--VMSQMSDAGFHCFAPDWLGFGFS---DKPEKGYDDFD 87 (295)
Q Consensus 13 ~~~~~~~~~~~~~~~~g~~~~~~~~vv~lHG~~~~~~~w~~--~~~~l~~~~~~via~Dl~G~G~S---~~~~~~~~~~~ 87 (295)
..+++.+|.++++..+-+.. ++|+||++||++++...|.. +++.|+++||+|+++|+||||.| +.+. ..
T Consensus 6 ~~~~~~~g~~l~~~~~~~~~-~~~~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~g~s~~~~~~~-----~~ 79 (207)
T 3bdi_A 6 EEFIDVNGTRVFQRKMVTDS-NRRSIALFHGYSFTSMDWDKADLFNNYSKIGYNVYAPDYPGFGRSASSEKYG-----ID 79 (207)
T ss_dssp EEEEEETTEEEEEEEECCTT-CCEEEEEECCTTCCGGGGGGGTHHHHHHTTTEEEEEECCTTSTTSCCCTTTC-----CT
T ss_pred eEEEeeCCcEEEEEEEeccC-CCCeEEEECCCCCCccccchHHHHHHHHhCCCeEEEEcCCcccccCcccCCC-----CC
Confidence 46788899999933332222 35799999999999999999 99999988999999999999999 6543 24
Q ss_pred C-CHHHHHHHHHHHHHHhCCCCceEEEEecccch-HHHHHHHHhCcCccceeEEEcCCCCCCCCCchhhhhhhcccchhh
Q 022534 88 F-TENEFHEELDKLLDVLEVKYPFFLVVQGFLVG-SYGLTWALKNPSRISKLAILNSPLTASSPLPGLFQQLRIPLLGEF 165 (295)
Q Consensus 88 ~-~~~~~~~~l~~~~~~l~~~~~~~lv~~G~~~G-~~~~~~a~~~p~~v~~lil~~~p~~~~~~~~~~~~~~~~~~~~~~ 165 (295)
+ +.+++++++.++++.++.++ ++++ |||+| .+++.+|.++|++++++++++++.. .. +
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~-i~l~--G~S~Gg~~a~~~a~~~~~~~~~~v~~~~~~~-----~~------------~ 139 (207)
T 3bdi_A 80 RGDLKHAAEFIRDYLKANGVAR-SVIM--GASMGGGMVIMTTLQYPDIVDGIIAVAPAWV-----ES------------L 139 (207)
T ss_dssp TCCHHHHHHHHHHHHHHTTCSS-EEEE--EETHHHHHHHHHHHHCGGGEEEEEEESCCSC-----GG------------G
T ss_pred cchHHHHHHHHHHHHHHcCCCc-eEEE--EECccHHHHHHHHHhCchhheEEEEeCCccc-----cc------------h
Confidence 5 77899999999999998764 6666 67766 4677888899999999998864310 00 0
Q ss_pred hhhhHHHHHHHHHhCCCccccccccccccccccccCCchhHHHHHHHhcchhhhhHhhhcCcCCCCCCCcEEEEEeCCCC
Q 022534 166 TAQNAIMAERFIEAGSPYVLKLDKADVYRLPYLASSGPGFALLEAARKVNFKDISSRIGAGFSSGSWDKPVLVAWGISDK 245 (295)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~ 245 (295)
... + .++++|+++++|++|.
T Consensus 140 ---------------------------------------------------~~~---~------~~~~~p~l~i~g~~D~ 159 (207)
T 3bdi_A 140 ---------------------------------------------------KGD---M------KKIRQKTLLVWGSKDH 159 (207)
T ss_dssp ---------------------------------------------------HHH---H------TTCCSCEEEEEETTCT
T ss_pred ---------------------------------------------------hHH---H------hhccCCEEEEEECCCC
Confidence 000 0 1447999999999999
Q ss_pred CCCcchHHHHHhcCCCCeEEEEecCCCCCCCCCChHHHHHHHHHHHHh
Q 022534 246 YLPQSVAEEFQKGNPNVVKLQMIEGAGHMPQEDWPEKVVDGLRYFFLN 293 (295)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 293 (295)
+++++.+..+.+..++ +++++++++||..+.++|+++.+.|.+|+++
T Consensus 160 ~~~~~~~~~~~~~~~~-~~~~~~~~~~H~~~~~~~~~~~~~i~~fl~~ 206 (207)
T 3bdi_A 160 VVPIALSKEYASIISG-SRLEIVEGSGHPVYIEKPEEFVRITVDFLRN 206 (207)
T ss_dssp TTTHHHHHHHHHHSTT-CEEEEETTCCSCHHHHSHHHHHHHHHHHHHT
T ss_pred ccchHHHHHHHHhcCC-ceEEEeCCCCCCccccCHHHHHHHHHHHHhh
Confidence 9999999999988876 7999999999999999999999999999976
|
| >1pja_A Palmitoyl-protein thioesterase 2 precursor; hydrolase, glycoprotein, lysosome; HET: NAG; 2.70A {Homo sapiens} SCOP: c.69.1.13 | Back alignment and structure |
|---|
Probab=99.94 E-value=1.5e-27 Score=206.18 Aligned_cols=226 Identities=12% Similarity=0.085 Sum_probs=144.9
Q ss_pred CceEEEEcCCCCCCccchhhHHHhhhC--CCeEEEeCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCceEE
Q 022534 35 LGTIVFLHGAPSHSYSYRNVMSQMSDA--GFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEELDKLLDVLEVKYPFFL 112 (295)
Q Consensus 35 ~~~vv~lHG~~~~~~~w~~~~~~l~~~--~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~~l 112 (295)
+++|||+||+++++..|..+++.|+++ ||+|+++|+||||.|+.+. .++++++++++.++++.+ .+ ++++
T Consensus 36 ~~~vvllHG~~~~~~~~~~~~~~L~~~~~g~~vi~~D~~G~G~s~~~~------~~~~~~~~~~l~~~~~~~-~~-~~~l 107 (302)
T 1pja_A 36 YKPVIVVHGLFDSSYSFRHLLEYINETHPGTVVTVLDLFDGRESLRPL------WEQVQGFREAVVPIMAKA-PQ-GVHL 107 (302)
T ss_dssp CCCEEEECCTTCCGGGGHHHHHHHHHHSTTCCEEECCSSCSGGGGSCH------HHHHHHHHHHHHHHHHHC-TT-CEEE
T ss_pred CCeEEEECCCCCChhHHHHHHHHHHhcCCCcEEEEeccCCCccchhhH------HHHHHHHHHHHHHHhhcC-CC-cEEE
Confidence 579999999999999999999999987 8999999999999998642 236788999999999987 44 5777
Q ss_pred EEecccch-HHHHHHHHhCcC-ccceeEEEcCCCCCCCCCchhhhhhhcccchhhhhhhHHHHHHHHHhCCCcccccccc
Q 022534 113 VVQGFLVG-SYGLTWALKNPS-RISKLAILNSPLTASSPLPGLFQQLRIPLLGEFTAQNAIMAERFIEAGSPYVLKLDKA 190 (295)
Q Consensus 113 v~~G~~~G-~~~~~~a~~~p~-~v~~lil~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (295)
+ |||+| .+++.+|.++|+ +|+++|+++++.......+............ ......+.. +........
T Consensus 108 v--GhS~Gg~ia~~~a~~~p~~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~---~~~~~~~~~ 176 (302)
T 1pja_A 108 I--CYSQGGLVCRALLSVMDDHNVDSFISLSSPQMGQYGDTDYLKWLFPTSMR------SNLYRICYS---PWGQEFSIC 176 (302)
T ss_dssp E--EETHHHHHHHHHHHHCTTCCEEEEEEESCCTTCBCSCCHHHHHHCTTCCH------HHHHHHHTS---TTGGGSTGG
T ss_pred E--EECHHHHHHHHHHHhcCccccCEEEEECCCcccccccchhhhhHHHHHHH------HHHhhccch---HHHHHhhhh
Confidence 7 67776 468888999999 7999999987654322111111100000000 000000000 000000000
Q ss_pred ccccccccccCCchhHH------HHHHHhcc-h-h--hhhHhhhcCcCCCCCCCcEEEEEeCCCCCCCcchHHHHHhcCC
Q 022534 191 DVYRLPYLASSGPGFAL------LEAARKVN-F-K--DISSRIGAGFSSGSWDKPVLVAWGISDKYLPQSVAEEFQKGNP 260 (295)
Q Consensus 191 ~~~~~~~~~~~~~~~~~------~~~~~~~~-~-~--~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~~ 260 (295)
. +.........+ ........ . . +....+ .+++ |+++|+|++|++++++.+..+.+..+
T Consensus 177 ~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l------~~i~-P~lii~G~~D~~v~~~~~~~~~~~~~ 244 (302)
T 1pja_A 177 N-----YWHDPHHDDLYLNASSFLALINGERDHPNATVWRKNF------LRVG-HLVLIGGPDDGVITPWQSSFFGFYDA 244 (302)
T ss_dssp G-----GBCCTTCHHHHHHHCSSHHHHTTSSCCTTHHHHHHHH------TTCS-EEEEEECTTCSSSSSGGGGGTCEECT
T ss_pred h-----cccChhhhhhhhccchHHHHhhcCCccccchhHHHHH------hccC-cEEEEEeCCCCccchhHhhHhhhcCC
Confidence 0 00000000000 00110000 0 0 011111 2678 99999999999999888877765554
Q ss_pred C--------------------------CeEEEEecCCCCCCCCCChHHHHHHHHHHH
Q 022534 261 N--------------------------VVKLQMIEGAGHMPQEDWPEKVVDGLRYFF 291 (295)
Q Consensus 261 ~--------------------------~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl 291 (295)
+ .+++++++++||+++.|+|++|++.|.+||
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl 301 (302)
T 1pja_A 245 NETVLEMEEQLVYLRDSFGLKTLLARGAIVRCPMAGISHTAWHSNRTLYETCIEPWL 301 (302)
T ss_dssp TCCEECGGGSHHHHTTTTSHHHHHHTTCEEEEECSSCCTTTTTSCHHHHHHHTGGGC
T ss_pred cccccchhhhhhhhhhhhchhhHhhcCCeEEEEecCccccccccCHHHHHHHHHHhc
Confidence 3 179999999999999999999999999997
|
| >3fla_A RIFR; alpha-beta hydrolase thioesterase, hydrolase; HET: MSE; 1.80A {Amycolatopsis mediterranei} PDB: 3flb_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=5.9e-26 Score=191.73 Aligned_cols=224 Identities=15% Similarity=0.165 Sum_probs=147.9
Q ss_pred CCCceEEEEcCCCCCCccchhhHHHhhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCceEE
Q 022534 33 SRLGTIVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEELDKLLDVLEVKYPFFL 112 (295)
Q Consensus 33 ~~~~~vv~lHG~~~~~~~w~~~~~~l~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~~l 112 (295)
..+|+|||+||++++...|..+++.|++ +|+|+++|+||||.|+.+.. .++.+++++++.++++.++.+ +++|
T Consensus 18 ~~~~~vv~~HG~~~~~~~~~~~~~~l~~-~~~v~~~d~~G~G~s~~~~~-----~~~~~~~~~~~~~~l~~~~~~-~~~l 90 (267)
T 3fla_A 18 DARARLVCLPHAGGSASFFFPLAKALAP-AVEVLAVQYPGRQDRRHEPP-----VDSIGGLTNRLLEVLRPFGDR-PLAL 90 (267)
T ss_dssp TCSEEEEEECCTTCCGGGGHHHHHHHTT-TEEEEEECCTTSGGGTTSCC-----CCSHHHHHHHHHHHTGGGTTS-CEEE
T ss_pred CCCceEEEeCCCCCCchhHHHHHHHhcc-CcEEEEecCCCCCCCCCCCC-----CcCHHHHHHHHHHHHHhcCCC-ceEE
Confidence 3468999999999999999999999986 69999999999999986432 347899999999999999765 5777
Q ss_pred EEecccch-HHHHHHHHhCcCc----cceeEEEcCCCCCCCCCchhhhhhhcccchhhhhhhHHHHHHHHHhC--CCccc
Q 022534 113 VVQGFLVG-SYGLTWALKNPSR----ISKLAILNSPLTASSPLPGLFQQLRIPLLGEFTAQNAIMAERFIEAG--SPYVL 185 (295)
Q Consensus 113 v~~G~~~G-~~~~~~a~~~p~~----v~~lil~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~ 185 (295)
+ |||+| .+++.+|.++|++ ++++++++++......... .... . . ......+.... .....
T Consensus 91 v--G~S~Gg~ia~~~a~~~~~~~~~~v~~lvl~~~~~~~~~~~~~-~~~~--~--~------~~~~~~~~~~~~~~~~~~ 157 (267)
T 3fla_A 91 F--GHSMGAIIGYELALRMPEAGLPAPVHLFASGRRAPSRYRDDD-VRGA--S--D------ERLVAELRKLGGSDAAML 157 (267)
T ss_dssp E--EETHHHHHHHHHHHHTTTTTCCCCSEEEEESCCCTTCCCCSC-TTCC--C--H------HHHHHHHHHTCHHHHHHH
T ss_pred E--EeChhHHHHHHHHHhhhhhccccccEEEECCCCccccccchh-hccc--c--h------HHHHHHHHHhcCcchhhc
Confidence 7 67766 5688889999987 8999988654322111000 0000 0 0 00000000000 00000
Q ss_pred cccccccccccccccCCchhHHHHHHHhcchhhhhHhhhcCcCCCCCCCcEEEEEeCCCCCCCcchHHHHHhcCCCCeEE
Q 022534 186 KLDKADVYRLPYLASSGPGFALLEAARKVNFKDISSRIGAGFSSGSWDKPVLVAWGISDKYLPQSVAEEFQKGNPNVVKL 265 (295)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~ 265 (295)
. ...... .+..... ..+.. ..... ......+++|+++|+|++|.+++++....+.+.+++.+++
T Consensus 158 ~--~~~~~~-----------~~~~~~~-~~~~~-~~~~~-~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~ 221 (267)
T 3fla_A 158 A--DPELLA-----------MVLPAIR-SDYRA-VETYR-HEPGRRVDCPVTVFTGDHDPRVSVGEARAWEEHTTGPADL 221 (267)
T ss_dssp H--SHHHHH-----------HHHHHHH-HHHHH-HHHCC-CCTTCCBSSCEEEEEETTCTTCCHHHHHGGGGGBSSCEEE
T ss_pred c--CHHHHH-----------HHHHHHH-HHHHh-hhccc-ccccCcCCCCEEEEecCCCCCCCHHHHHHHHHhcCCCceE
Confidence 0 000000 0000000 00000 00000 0011367999999999999999999889998888866899
Q ss_pred EEecCCCCCCCCCChHHHHHHHHHHHHh
Q 022534 266 QMIEGAGHMPQEDWPEKVVDGLRYFFLN 293 (295)
Q Consensus 266 ~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 293 (295)
+++++ ||++++|+|+++++.|.+||..
T Consensus 222 ~~~~g-gH~~~~~~~~~~~~~i~~fl~~ 248 (267)
T 3fla_A 222 RVLPG-GHFFLVDQAAPMIATMTEKLAG 248 (267)
T ss_dssp EEESS-STTHHHHTHHHHHHHHHHHTC-
T ss_pred EEecC-CceeeccCHHHHHHHHHHHhcc
Confidence 99998 9999999999999999999975
|
| >3dkr_A Esterase D; alpha beta hydrolase, mechanism, catalytic triad, rotation; 1.60A {Lactobacillus rhamnosus} SCOP: c.69.1.0 PDB: 3dlt_A 3dyi_A 3dyv_A 3e1g_A | Back alignment and structure |
|---|
Probab=99.94 E-value=5.7e-26 Score=189.36 Aligned_cols=222 Identities=13% Similarity=0.186 Sum_probs=146.2
Q ss_pred CceEEEEcCCCCCCccchhhHHHhhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCC-CceEEE
Q 022534 35 LGTIVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEELDKLLDVLEVK-YPFFLV 113 (295)
Q Consensus 35 ~~~vv~lHG~~~~~~~w~~~~~~l~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~-~~~~lv 113 (295)
+|+|||+||++++...|..+++.|+++||+|+++|+||||.|+..... ..++.+++.+|+.++++.+... ++++++
T Consensus 22 ~~~vv~~HG~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~g~s~~~~~~---~~~~~~~~~~d~~~~i~~l~~~~~~~~l~ 98 (251)
T 3dkr_A 22 DTGVVLLHAYTGSPNDMNFMARALQRSGYGVYVPLFSGHGTVEPLDIL---TKGNPDIWWAESSAAVAHMTAKYAKVFVF 98 (251)
T ss_dssp SEEEEEECCTTCCGGGGHHHHHHHHHTTCEEEECCCTTCSSSCTHHHH---HHCCHHHHHHHHHHHHHHHHTTCSEEEEE
T ss_pred CceEEEeCCCCCCHHHHHHHHHHHHHCCCEEEecCCCCCCCCChhhhc---CcccHHHHHHHHHHHHHHHHHhcCCeEEE
Confidence 468999999999999999999999988999999999999999753211 0126678899999999887542 356666
Q ss_pred Eecccch-HHHHHHHHhCcCccceeEEEcCCCCCCCCCchhhhhhhcccchhhhhhhHHHHHHHHHhCCCcccccccccc
Q 022534 114 VQGFLVG-SYGLTWALKNPSRISKLAILNSPLTASSPLPGLFQQLRIPLLGEFTAQNAIMAERFIEAGSPYVLKLDKADV 192 (295)
Q Consensus 114 ~~G~~~G-~~~~~~a~~~p~~v~~lil~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (295)
|||+| .+++.+|.++|++++++++++ |....... ..... . .+. ..+ ..... ..+ . ...
T Consensus 99 --G~S~Gg~~a~~~a~~~p~~~~~~i~~~-p~~~~~~~--~~~~~-~----~~~---~~~-~~~~~-~~~-----~-~~~ 157 (251)
T 3dkr_A 99 --GLSLGGIFAMKALETLPGITAGGVFSS-PILPGKHH--LVPGF-L----KYA---EYM-NRLAG-KSD-----E-STQ 157 (251)
T ss_dssp --ESHHHHHHHHHHHHHCSSCCEEEESSC-CCCTTCBC--HHHHH-H----HHH---HHH-HHHHT-CCC-----C-HHH
T ss_pred --EechHHHHHHHHHHhCccceeeEEEec-chhhccch--hhHHH-H----HHH---HHH-Hhhcc-cCc-----c-hhh
Confidence 77766 468888999999999887764 44322110 11110 0 000 000 00000 000 0 000
Q ss_pred ccccccccCCchhHHHHHHHhcchhhhhHhhhcCcCCCCCCCcEEEEEeCCCCCCCcchHHHHHhcCCC--CeEEEEecC
Q 022534 193 YRLPYLASSGPGFALLEAARKVNFKDISSRIGAGFSSGSWDKPVLVAWGISDKYLPQSVAEEFQKGNPN--VVKLQMIEG 270 (295)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~--~~~~~~i~~ 270 (295)
+.. ........ +.......... ..++++|+++|+|++|.+++++.+..+.+.+++ .++++++++
T Consensus 158 ~~~----------~~~~~~~~--~~~~~~~~~~~--~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (251)
T 3dkr_A 158 ILA----------YLPGQLAA--IDQFATTVAAD--LNLVKQPTFIGQAGQDELVDGRLAYQLRDALINAARVDFHWYDD 223 (251)
T ss_dssp HHH----------HHHHHHHH--HHHHHHHHHHT--GGGCCSCEEEEEETTCSSBCTTHHHHHHHHCTTCSCEEEEEETT
T ss_pred HHh----------hhHHHHHH--HHHHHHHHhcc--ccccCCCEEEEecCCCcccChHHHHHHHHHhcCCCCceEEEeCC
Confidence 000 00000000 00000101111 125689999999999999999999999888765 579999999
Q ss_pred CCCCCCCCC-hHHHHHHHHHHHHhc
Q 022534 271 AGHMPQEDW-PEKVVDGLRYFFLNY 294 (295)
Q Consensus 271 ~gH~~~~e~-p~~~~~~i~~fl~~~ 294 (295)
+||.++.+. |+++.+.|.+||+++
T Consensus 224 ~gH~~~~~~~~~~~~~~i~~fl~~~ 248 (251)
T 3dkr_A 224 AKHVITVNSAHHALEEDVIAFMQQE 248 (251)
T ss_dssp CCSCTTTSTTHHHHHHHHHHHHHTT
T ss_pred CCcccccccchhHHHHHHHHHHHhh
Confidence 999998886 999999999999875
|
| >3qmv_A Thioesterase, REDJ; alpha/beta hydrolase fold, hydrolase; 2.12A {Streptomyces coelicolor} PDB: 3qmw_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=1.4e-25 Score=191.87 Aligned_cols=221 Identities=13% Similarity=0.080 Sum_probs=141.5
Q ss_pred ceEEEEcCCCCCCccchhhHHHhhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCceEEEEe
Q 022534 36 GTIVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEELDKLLDVLEVKYPFFLVVQ 115 (295)
Q Consensus 36 ~~vv~lHG~~~~~~~w~~~~~~l~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~~lv~~ 115 (295)
|+|||+||++++...|..+++.|++ +|+|+++|+||||.|+.+.. .++++++++++.++++.+...++++|+
T Consensus 52 ~~lvllHG~~~~~~~~~~l~~~L~~-~~~v~~~D~~G~G~S~~~~~-----~~~~~~~a~~~~~~l~~~~~~~~~~lv-- 123 (280)
T 3qmv_A 52 LRLVCFPYAGGTVSAFRGWQERLGD-EVAVVPVQLPGRGLRLRERP-----YDTMEPLAEAVADALEEHRLTHDYALF-- 123 (280)
T ss_dssp EEEEEECCTTCCGGGGTTHHHHHCT-TEEEEECCCTTSGGGTTSCC-----CCSHHHHHHHHHHHHHHTTCSSSEEEE--
T ss_pred ceEEEECCCCCChHHHHHHHHhcCC-CceEEEEeCCCCCCCCCCCC-----CCCHHHHHHHHHHHHHHhCCCCCEEEE--
Confidence 7899999999999999999999986 89999999999999976432 357899999999999998333467777
Q ss_pred cccch-HHHHHHHHhCcCccc----eeEEEcCCCCCCCCCchhhhhhhcccchhhhhhhHHHHHHHHHh-CCCccccccc
Q 022534 116 GFLVG-SYGLTWALKNPSRIS----KLAILNSPLTASSPLPGLFQQLRIPLLGEFTAQNAIMAERFIEA-GSPYVLKLDK 189 (295)
Q Consensus 116 G~~~G-~~~~~~a~~~p~~v~----~lil~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 189 (295)
|||+| .+++.+|.++|+++. .+++++++......... ... . ....+....... ..+.... ..
T Consensus 124 G~S~Gg~va~~~a~~~p~~~~~~~~~l~l~~~~~p~~~~~~~-~~~--------~--~~~~~~~~~~~~~~~~~~~~-~~ 191 (280)
T 3qmv_A 124 GHSMGALLAYEVACVLRRRGAPRPRHLFVSGSRAPHLYGDRA-DHT--------L--SDTALREVIRDLGGLDDADT-LG 191 (280)
T ss_dssp EETHHHHHHHHHHHHHHHTTCCCCSCEEEESCCCGGGCSCCC-GGG--------S--CHHHHHHHHHHHTCCC-------
T ss_pred EeCHhHHHHHHHHHHHHHcCCCCceEEEEECCCCCCCcCccc-ccc--------c--CHHHHHHHHHHhCCCChhhh-cC
Confidence 77766 578889999998877 77766543211110000 000 0 000000111000 0000000 00
Q ss_pred cccccccccccCCchhHHHHHHHhcchhhhhHhhhcCcCCCCCCCcEEEEEeCCCCCCCcchHHHHHhcCCCCeEEEEec
Q 022534 190 ADVYRLPYLASSGPGFALLEAARKVNFKDISSRIGAGFSSGSWDKPVLVAWGISDKYLPQSVAEEFQKGNPNVVKLQMIE 269 (295)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~ 269 (295)
....+ .+..... ..+. ...... ......+++|+|+|+|++|.+++.+....+.+..++..++++++
T Consensus 192 ~~~~~-----------~~~~~~~-~~~~-~~~~~~-~~~~~~i~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (280)
T 3qmv_A 192 AAYFD-----------RRLPVLR-ADLR-ACERYD-WHPRPPLDCPTTAFSAAADPIATPEMVEAWRPYTTGSFLRRHLP 257 (280)
T ss_dssp ---CC-----------TTHHHHH-HHHH-HHHTCC-CCCCCCBCSCEEEEEEEECSSSCHHHHHTTGGGBSSCEEEEEEE
T ss_pred HHHHH-----------HHHHHHH-HHHH-HHHhcc-ccCCCceecCeEEEEecCCCCcChHHHHHHHHhcCCceEEEEec
Confidence 00000 0000000 0000 000000 00124679999999999999999988888888888766788887
Q ss_pred CCCCCCCC--CChHHHHHHHHHHH
Q 022534 270 GAGHMPQE--DWPEKVVDGLRYFF 291 (295)
Q Consensus 270 ~~gH~~~~--e~p~~~~~~i~~fl 291 (295)
+||++++ |+|+++++.|.+||
T Consensus 258 -ggH~~~~~~~~~~~~~~~i~~~L 280 (280)
T 3qmv_A 258 -GNHFFLNGGPSRDRLLAHLGTEL 280 (280)
T ss_dssp -EETTGGGSSHHHHHHHHHHHTTC
T ss_pred -CCCeEEcCchhHHHHHHHHHhhC
Confidence 5999999 88999999999885
|
| >2i3d_A AGR_C_3351P, hypothetical protein ATU1826; structural genomics, APC5865, hydrolase, PSI-2, protein STRU initiative; HET: MSE; 1.50A {Agrobacterium tumefaciens str} SCOP: c.69.1.36 | Back alignment and structure |
|---|
Probab=99.92 E-value=3.4e-23 Score=174.18 Aligned_cols=204 Identities=14% Similarity=0.174 Sum_probs=141.2
Q ss_pred cccccccc-ccc--eeeEEeCcEEEEEEEcCCCCCCCceEEEEcCCCCCCc-----cchhhHHHhhhCCCeEEEeCCCCC
Q 022534 2 ISRIENKG-REY--GSYIKSGEYRWFVRETGSADSRLGTIVFLHGAPSHSY-----SYRNVMSQMSDAGFHCFAPDWLGF 73 (295)
Q Consensus 2 ~~~~~~~~-~~~--~~~~~~~~~~~~~~~~g~~~~~~~~vv~lHG~~~~~~-----~w~~~~~~l~~~~~~via~Dl~G~ 73 (295)
-+.+||.+ +.. ..++...+..+.+....++.+++|+||++||++++.. .|..+++.|+++||.|+++|+|||
T Consensus 11 ~~~~~~~~~~~e~~~~~~~~~~g~l~~~~~~p~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~ 90 (249)
T 2i3d_A 11 SSGRENLYFQGHMPEVIFNGPAGRLEGRYQPSKEKSAPIAIILHPHPQFGGTMNNQIVYQLFYLFQKRGFTTLRFNFRSI 90 (249)
T ss_dssp -------------CEEEEEETTEEEEEEEECCSSTTCCEEEEECCCGGGTCCTTSHHHHHHHHHHHHTTCEEEEECCTTS
T ss_pred ccccccccccCceeEEEEECCCceEEEEEEcCCCCCCCEEEEECCCcccCCCccchHHHHHHHHHHHCCCEEEEECCCCC
Confidence 34566443 334 4455665557776655544445689999999854332 357888999888999999999999
Q ss_pred CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhC---CC-CceEEEEecccch-HHHHHHHHhCcCccceeEEEcCCCCCCC
Q 022534 74 GFSDKPEKGYDDFDFTENEFHEELDKLLDVLE---VK-YPFFLVVQGFLVG-SYGLTWALKNPSRISKLAILNSPLTASS 148 (295)
Q Consensus 74 G~S~~~~~~~~~~~~~~~~~~~~l~~~~~~l~---~~-~~~~lv~~G~~~G-~~~~~~a~~~p~~v~~lil~~~p~~~~~ 148 (295)
|.|+.+.. +..+.+ +|+.++++.+. .+ ++++++ |||+| .+++.+|.++|+ ++++++++++....
T Consensus 91 G~s~~~~~------~~~~~~-~d~~~~i~~l~~~~~~~~~i~l~--G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~- 159 (249)
T 2i3d_A 91 GRSQGEFD------HGAGEL-SDAASALDWVQSLHPDSKSCWVA--GYSFGAWIGMQLLMRRPE-IEGFMSIAPQPNTY- 159 (249)
T ss_dssp TTCCSCCC------SSHHHH-HHHHHHHHHHHHHCTTCCCEEEE--EETHHHHHHHHHHHHCTT-EEEEEEESCCTTTS-
T ss_pred CCCCCCCC------CccchH-HHHHHHHHHHHHhCCCCCeEEEE--EECHHHHHHHHHHhcCCC-ccEEEEEcCchhhh-
Confidence 99986432 133444 77777777653 22 246676 67776 467788889998 99999885422100
Q ss_pred CCchhhhhhhcccchhhhhhhHHHHHHHHHhCCCccccccccccccccccccCCchhHHHHHHHhcchhhhhHhhhcCcC
Q 022534 149 PLPGLFQQLRIPLLGEFTAQNAIMAERFIEAGSPYVLKLDKADVYRLPYLASSGPGFALLEAARKVNFKDISSRIGAGFS 228 (295)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (295)
. . ..
T Consensus 160 ---------------------------------~------------~----------------------~~--------- 163 (249)
T 2i3d_A 160 ---------------------------------D------------F----------------------SF--------- 163 (249)
T ss_dssp ---------------------------------C------------C----------------------TT---------
T ss_pred ---------------------------------h------------h----------------------hh---------
Confidence 0 0 00
Q ss_pred CCCCCCcEEEEEeCCCCCCCcchHHHHHhcCCC----CeEEEEecCCCCCCCCCChHHHHHHHHHHHHh
Q 022534 229 SGSWDKPVLVAWGISDKYLPQSVAEEFQKGNPN----VVKLQMIEGAGHMPQEDWPEKVVDGLRYFFLN 293 (295)
Q Consensus 229 ~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~----~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 293 (295)
...+++|+++++|++|.+++.+.+..+.+.++. .+++++++++||..+ ++++++.+.|.+||..
T Consensus 164 ~~~~~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~H~~~-~~~~~~~~~i~~fl~~ 231 (249)
T 2i3d_A 164 LAPCPSSGLIINGDADKVAPEKDVNGLVEKLKTQKGILITHRTLPGANHFFN-GKVDELMGECEDYLDR 231 (249)
T ss_dssp CTTCCSCEEEEEETTCSSSCHHHHHHHHHHHTTSTTCCEEEEEETTCCTTCT-TCHHHHHHHHHHHHHH
T ss_pred hcccCCCEEEEEcCCCCCCCHHHHHHHHHHHhhccCCceeEEEECCCCcccc-cCHHHHHHHHHHHHHH
Confidence 014579999999999999999988888877763 479999999999988 8999999999999976
|
| >3ksr_A Putative serine hydrolase; catalytic triad, structural genomics, JOIN for structural genomics, JCSG; 2.69A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=99.92 E-value=7.8e-24 Score=181.40 Aligned_cols=222 Identities=14% Similarity=0.161 Sum_probs=152.6
Q ss_pred eeEEeCcEEEEEEEcCCCCCCCceEEEEcCCCCCCccchhhHHHhhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCCHHHH
Q 022534 14 SYIKSGEYRWFVRETGSADSRLGTIVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEF 93 (295)
Q Consensus 14 ~~~~~~~~~~~~~~~g~~~~~~~~vv~lHG~~~~~~~w~~~~~~l~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~ 93 (295)
.++..+|..+++..+++. +.|+|||+||++++...|..+++.|+++||.|+++|+||||.|+.+.. .++.+++
T Consensus 9 ~~~~~~g~~l~~~~~~p~--~~p~vv~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~g~s~~~~~-----~~~~~~~ 81 (290)
T 3ksr_A 9 IEIPVGQDELSGTLLTPT--GMPGVLFVHGWGGSQHHSLVRAREAVGLGCICMTFDLRGHEGYASMRQ-----SVTRAQN 81 (290)
T ss_dssp EEEEETTEEEEEEEEEEE--SEEEEEEECCTTCCTTTTHHHHHHHHTTTCEEECCCCTTSGGGGGGTT-----TCBHHHH
T ss_pred EEecCCCeEEEEEEecCC--CCcEEEEeCCCCCCcCcHHHHHHHHHHCCCEEEEeecCCCCCCCCCcc-----cccHHHH
Confidence 456678899998888765 468999999999999999999999998899999999999999987532 3467889
Q ss_pred HHHHHHHHHHhCCC-----CceEEEEecccchH-HHHHHHHhCcCccceeEEEcCCCCCCCCCchhhhhhhcccchhhhh
Q 022534 94 HEELDKLLDVLEVK-----YPFFLVVQGFLVGS-YGLTWALKNPSRISKLAILNSPLTASSPLPGLFQQLRIPLLGEFTA 167 (295)
Q Consensus 94 ~~~l~~~~~~l~~~-----~~~~lv~~G~~~G~-~~~~~a~~~p~~v~~lil~~~p~~~~~~~~~~~~~~~~~~~~~~~~ 167 (295)
++|+.++++.+... ++++++ |||+|+ +++.+|.++| +++++++++.......+. .+.. .+..
T Consensus 82 ~~d~~~~i~~l~~~~~~~~~~v~l~--G~S~Gg~~a~~~a~~~~--~~~~~l~~p~~~~~~~~~-------~~~~-~~~~ 149 (290)
T 3ksr_A 82 LDDIKAAYDQLASLPYVDAHSIAVV--GLSYGGYLSALLTRERP--VEWLALRSPALYKDAHWD-------QPKV-SLNA 149 (290)
T ss_dssp HHHHHHHHHHHHTSTTEEEEEEEEE--EETHHHHHHHHHTTTSC--CSEEEEESCCCCCSSCTT-------SBHH-HHHH
T ss_pred HHHHHHHHHHHHhcCCCCccceEEE--EEchHHHHHHHHHHhCC--CCEEEEeCcchhhhhhhh-------cccc-cccC
Confidence 99999999987422 246666 777764 5777778887 778887743322211110 0000 0000
Q ss_pred hhHHHHHHHHHhCCCccccccccccccccccccCCchhHHHHHHHhcchhhhhHhhhcCcCCCCCCCcEEEEEeCCCCCC
Q 022534 168 QNAIMAERFIEAGSPYVLKLDKADVYRLPYLASSGPGFALLEAARKVNFKDISSRIGAGFSSGSWDKPVLVAWGISDKYL 247 (295)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~ 247 (295)
... ...+.. .... . .. ......+. .+++|+|+|+|++|.++
T Consensus 150 ~~~--~~~~~~------------~~~~--~-----~~------------~~~~~~~~------~~~~P~lii~G~~D~~v 190 (290)
T 3ksr_A 150 DPD--LMDYRR------------RALA--P-----GD------------NLALAACA------QYKGDVLLVEAENDVIV 190 (290)
T ss_dssp STT--HHHHTT------------SCCC--G-----GG------------CHHHHHHH------HCCSEEEEEEETTCSSS
T ss_pred Chh--hhhhhh------------hhhh--h-----cc------------ccHHHHHH------hcCCCeEEEEecCCccc
Confidence 000 000000 0000 0 00 00011111 45799999999999999
Q ss_pred CcchHHHHHhcCCC--CeEEEEecCCCCCCCC-CChHHHHHHHHHHHHh
Q 022534 248 PQSVAEEFQKGNPN--VVKLQMIEGAGHMPQE-DWPEKVVDGLRYFFLN 293 (295)
Q Consensus 248 ~~~~~~~~~~~~~~--~~~~~~i~~~gH~~~~-e~p~~~~~~i~~fl~~ 293 (295)
+.+.+..+.+.+++ .+++++++++||.++. ++++++.+.+.+||..
T Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~ 239 (290)
T 3ksr_A 191 PHPVMRNYADAFTNARSLTSRVIAGADHALSVKEHQQEYTRALIDWLTE 239 (290)
T ss_dssp CHHHHHHHHHHTTTSSEEEEEEETTCCTTCCSHHHHHHHHHHHHHHHHH
T ss_pred ChHHHHHHHHHhccCCCceEEEcCCCCCCCCcchHHHHHHHHHHHHHHH
Confidence 99989999888765 2569999999998765 4899999999999975
|
| >1ufo_A Hypothetical protein TT1662; alpha-beta fold, hydrolase, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.60A {Thermus thermophilus} SCOP: c.69.1.27 | Back alignment and structure |
|---|
Probab=99.92 E-value=2e-23 Score=172.80 Aligned_cols=216 Identities=16% Similarity=0.127 Sum_probs=147.5
Q ss_pred eeEEeCcEEEEEEEcCCCCCCCceEEEEcCCCCCCccchhhHHHhhhCCCeEEEeCCCCCCCCCCCCCCCC------CCC
Q 022534 14 SYIKSGEYRWFVRETGSADSRLGTIVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYD------DFD 87 (295)
Q Consensus 14 ~~~~~~~~~~~~~~~g~~~~~~~~vv~lHG~~~~~~~w~~~~~~l~~~~~~via~Dl~G~G~S~~~~~~~~------~~~ 87 (295)
.+++.+|+.+.+..... ++|+||++||++++...|..+++.|+++||+|+++|+||||.|..+..... .+.
T Consensus 6 ~~~~~~g~~~~~~~~~~---~~~~vv~~hG~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~ 82 (238)
T 1ufo_A 6 ERLTLAGLSVLARIPEA---PKALLLALHGLQGSKEHILALLPGYAERGFLLLAFDAPRHGEREGPPPSSKSPRYVEEVY 82 (238)
T ss_dssp EEEEETTEEEEEEEESS---CCEEEEEECCTTCCHHHHHHTSTTTGGGTEEEEECCCTTSTTSSCCCCCTTSTTHHHHHH
T ss_pred cccccCCEEEEEEecCC---CccEEEEECCCcccchHHHHHHHHHHhCCCEEEEecCCCCccCCCCCCcccccchhhhHH
Confidence 34677888775433332 357999999999999999999999988799999999999999986543210 000
Q ss_pred CCHHHHHHHHHHHHHHh---CCCCceEEEEecccch-HHHHHHHHhCcCccceeEEEcCCCCCCCCCchhhhhhhcccch
Q 022534 88 FTENEFHEELDKLLDVL---EVKYPFFLVVQGFLVG-SYGLTWALKNPSRISKLAILNSPLTASSPLPGLFQQLRIPLLG 163 (295)
Q Consensus 88 ~~~~~~~~~l~~~~~~l---~~~~~~~lv~~G~~~G-~~~~~~a~~~p~~v~~lil~~~p~~~~~~~~~~~~~~~~~~~~ 163 (295)
.+.++.++|+.++++.+ +. ++++++ |||+| .+++.+|.++|+.++++++++++..... ....+ ..+
T Consensus 83 ~~~~~~~~d~~~~~~~l~~~~~-~~i~l~--G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~~~~~~-~~~~~---~~~--- 152 (238)
T 1ufo_A 83 RVALGFKEEARRVAEEAERRFG-LPLFLA--GGSLGAFVAHLLLAEGFRPRGVLAFIGSGFPMKL-PQGQV---VED--- 152 (238)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHC-CCEEEE--EETHHHHHHHHHHHTTCCCSCEEEESCCSSCCCC-CTTCC---CCC---
T ss_pred HHHHHHHHHHHHHHHHHHhccC-CcEEEE--EEChHHHHHHHHHHhccCcceEEEEecCCccchh-hhhhc---cCC---
Confidence 02456677877777765 33 356666 67776 4678888899998888877654332110 00000 000
Q ss_pred hhhhhhHHHHHHHHHhCCCccccccccccccccccccCCchhHHHHHHHhcchhhhhHhhhcCcCCCCC-CCcEEEEEeC
Q 022534 164 EFTAQNAIMAERFIEAGSPYVLKLDKADVYRLPYLASSGPGFALLEAARKVNFKDISSRIGAGFSSGSW-DKPVLVAWGI 242 (295)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~P~l~i~G~ 242 (295)
. . .......+..... .++ ++|+++++|+
T Consensus 153 ----~-~-------------------------------------~~~~~~~~~~~~~---------~~~~~~P~l~i~g~ 181 (238)
T 1ufo_A 153 ----P-G-------------------------------------VLALYQAPPATRG---------EAYGGVPLLHLHGS 181 (238)
T ss_dssp ----H-H-------------------------------------HHHHHHSCGGGCG---------GGGTTCCEEEEEET
T ss_pred ----c-c-------------------------------------cchhhcCChhhhh---------hhccCCcEEEEECC
Confidence 0 0 0000001111111 134 7999999999
Q ss_pred CCCCCCcchHHHHHhcCCC-----CeEEEEecCCCCCCCCCChHHHHHHHHHHHHh
Q 022534 243 SDKYLPQSVAEEFQKGNPN-----VVKLQMIEGAGHMPQEDWPEKVVDGLRYFFLN 293 (295)
Q Consensus 243 ~D~~~~~~~~~~~~~~~~~-----~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 293 (295)
+|.+++.+.+..+.+.++. .+++++++++||..+.|.++++.+.|.+|+..
T Consensus 182 ~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~l~~~l~~ 237 (238)
T 1ufo_A 182 RDHIVPLARMEKTLEALRPHYPEGRLARFVEEGAGHTLTPLMARVGLAFLEHWLEA 237 (238)
T ss_dssp TCTTTTHHHHHHHHHHHGGGCTTCCEEEEEETTCCSSCCHHHHHHHHHHHHHHHHC
T ss_pred CCCccCcHHHHHHHHHHhhcCCCCceEEEEeCCCCcccHHHHHHHHHHHHHHHHhc
Confidence 9999999988888877761 37999999999999999999999999888864
|
| >2rau_A Putative esterase; NP_343859.1, putative lipase, structural genomics, joint CEN structural genomics, JCSG; HET: PG4 UNL; 1.85A {Sulfolobus solfataricus P2} | Back alignment and structure |
|---|
Probab=99.91 E-value=2.7e-24 Score=189.73 Aligned_cols=121 Identities=11% Similarity=0.162 Sum_probs=92.2
Q ss_pred EeCcEEEEEEEcCCCCCCCceEEEEcCCCCCCcc-----ch-----------hhHHHhhhCCCeEEEeCCCCCCCCCCCC
Q 022534 17 KSGEYRWFVRETGSADSRLGTIVFLHGAPSHSYS-----YR-----------NVMSQMSDAGFHCFAPDWLGFGFSDKPE 80 (295)
Q Consensus 17 ~~~~~~~~~~~~g~~~~~~~~vv~lHG~~~~~~~-----w~-----------~~~~~l~~~~~~via~Dl~G~G~S~~~~ 80 (295)
..+++.+++...+.++ +|+|||+||++++... |. .+++.|+++||+|+++|+||||.|+.+.
T Consensus 34 ~~~~~~~~~~~~~~~~--~~~vv~~hG~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~ 111 (354)
T 2rau_A 34 PYDIISLHKVNLIGGG--NDAVLILPGTWSSGEQLVTISWNGVHYTIPDYRKSIVLYLARNGFNVYTIDYRTHYVPPFLK 111 (354)
T ss_dssp TTCEEEEEEEEETTCC--EEEEEEECCTTCCHHHHHHSEETTEECSCCCGGGCHHHHHHHTTEEEEEEECGGGGCCTTCC
T ss_pred CCCceEEEeecccCCC--CCEEEEECCCCCCccccccccccccccccccchhhHHHHHHhCCCEEEEecCCCCCCCCccc
Confidence 3467888887665433 4799999999998874 44 8899998879999999999999998643
Q ss_pred CCCCC--CCCCHHHHHHHHHHHHHHh----CCCCceEEEEecccch-HHHHHHHHhC-cCccceeEEEcC
Q 022534 81 KGYDD--FDFTENEFHEELDKLLDVL----EVKYPFFLVVQGFLVG-SYGLTWALKN-PSRISKLAILNS 142 (295)
Q Consensus 81 ~~~~~--~~~~~~~~~~~l~~~~~~l----~~~~~~~lv~~G~~~G-~~~~~~a~~~-p~~v~~lil~~~ 142 (295)
..... ..++.+++++|+.++++.+ +.++ ++++ |||+| .+++.+|.++ |++|+++|++++
T Consensus 112 ~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~-~~l~--G~S~Gg~~a~~~a~~~~p~~v~~lvl~~~ 178 (354)
T 2rau_A 112 DRQLSFTANWGWSTWISDIKEVVSFIKRDSGQER-IYLA--GESFGGIAALNYSSLYWKNDIKGLILLDG 178 (354)
T ss_dssp GGGGGGGTTCSHHHHHHHHHHHHHHHHHHHCCSS-EEEE--EETHHHHHHHHHHHHHHHHHEEEEEEESC
T ss_pred ccccccccCCcHHHHHHHHHHHHHHHHHhcCCce-EEEE--EECHhHHHHHHHHHhcCccccceEEEecc
Confidence 21000 0457788999999998874 6654 6666 67766 4677888898 999999999854
|
| >1qlw_A Esterase; anisotropic refinement, atomic resolution, alpha/beta hydrolase; 1.09A {Alcaligenes SP} SCOP: c.69.1.15 PDB: 2wkw_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=3.2e-23 Score=181.86 Aligned_cols=198 Identities=19% Similarity=0.199 Sum_probs=143.7
Q ss_pred ceeeEEeCcEEEEEEEcCCCCCCCceEEEEcCCCCCCccch-------hhHHHhhhCCCeEEEeCCCCCCCCCCCCCCCC
Q 022534 12 YGSYIKSGEYRWFVRETGSADSRLGTIVFLHGAPSHSYSYR-------NVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYD 84 (295)
Q Consensus 12 ~~~~~~~~~~~~~~~~~g~~~~~~~~vv~lHG~~~~~~~w~-------~~~~~l~~~~~~via~Dl~G~G~S~~~~~~~~ 84 (295)
.|..+..+...++|...+.. .+++|||+||++.+...|. .+++.|+++||+|+++|+||||+|+.......
T Consensus 41 ~g~~~~~~~~~~~~~~p~~~--~~~~vvl~HG~g~~~~~~~~~pdg~~~~~~~l~~~G~~V~~~D~~G~G~S~~~~~~~~ 118 (328)
T 1qlw_A 41 AHGTVTVDQMYVRYQIPQRA--KRYPITLIHGCCLTGMTWETTPDGRMGWDEYFLRKGYSTYVIDQSGRGRSATDISAIN 118 (328)
T ss_dssp SSEEEEESCEEEEEEEETTC--CSSCEEEECCTTCCGGGGSSCTTSCCCHHHHHHHTTCCEEEEECTTSTTSCCCCHHHH
T ss_pred CCceEEeeeEEEEEEccCCC--CCccEEEEeCCCCCCCccccCCCCchHHHHHHHHCCCeEEEECCCCcccCCCCCcccc
Confidence 34455555566655544432 3578999999999999998 48899988899999999999999986431100
Q ss_pred ------------------C-------CCCC----------------HHH------------------HHHHHHHHHHHhC
Q 022534 85 ------------------D-------FDFT----------------ENE------------------FHEELDKLLDVLE 105 (295)
Q Consensus 85 ------------------~-------~~~~----------------~~~------------------~~~~l~~~~~~l~ 105 (295)
. +.|. .++ +++++.+++++++
T Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~ 198 (328)
T 1qlw_A 119 AVKLGKAPASSLPDLFAAGHEAAWAIFRFGPRYPDAFKDTQFPVQAQAELWQQMVPDWLGSMPTPNPTVANLSKLAIKLD 198 (328)
T ss_dssp HHHTTSSCGGGSCCCBCCCHHHHHHHTTSSSBTTBCCTTCCSCGGGHHHHHHHCCCBCGGGSCSSCHHHHHHHHHHHHHT
T ss_pred cccccccCcccccceeccchhhhhhHhhhcccCCccCcCccCCHHHHHHHHHHhCccccccCCChhHHHHHHHHHHHHhC
Confidence 0 0000 223 7788888888875
Q ss_pred CCCceEEEEecccch-HHHHHHHHhCcCccceeEEEcCCCCCCCCCchhhhhhhcccchhhhhhhHHHHHHHHHhCCCcc
Q 022534 106 VKYPFFLVVQGFLVG-SYGLTWALKNPSRISKLAILNSPLTASSPLPGLFQQLRIPLLGEFTAQNAIMAERFIEAGSPYV 184 (295)
Q Consensus 106 ~~~~~~lv~~G~~~G-~~~~~~a~~~p~~v~~lil~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (295)
+++++ |||+| .+++.+|.++|++|++++++++... .+
T Consensus 199 ---~~~lv--GhS~GG~~a~~~a~~~p~~v~~~v~~~p~~~-----------------------------------~~-- 236 (328)
T 1qlw_A 199 ---GTVLL--SHSQSGIYPFQTAAMNPKGITAIVSVEPGEC-----------------------------------PK-- 236 (328)
T ss_dssp ---SEEEE--EEGGGTTHHHHHHHHCCTTEEEEEEESCSCC-----------------------------------CC--
T ss_pred ---CceEE--EECcccHHHHHHHHhChhheeEEEEeCCCCC-----------------------------------CC--
Confidence 46676 67765 5788889999999999998853110 00
Q ss_pred ccccccccccccccccCCchhHHHHHHHhcchhhhhHhhhcCcCCCCCCCcEEEEEeCCCCCCCc-----chHHHHHhcC
Q 022534 185 LKLDKADVYRLPYLASSGPGFALLEAARKVNFKDISSRIGAGFSSGSWDKPVLVAWGISDKYLPQ-----SVAEEFQKGN 259 (295)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~~~-----~~~~~~~~~~ 259 (295)
. .+... ..++|+|+++|++|.++++ +.++.+.+.+
T Consensus 237 --~-----------------------------~~~~~---------~~~~PvLii~G~~D~~~p~~~~~~~~~~~~~~~l 276 (328)
T 1qlw_A 237 --P-----------------------------EDVKP---------LTSIPVLVVFGDHIEEFPRWAPRLKACHAFIDAL 276 (328)
T ss_dssp --G-----------------------------GGCGG---------GTTSCEEEEECSSCTTCTTTHHHHHHHHHHHHHH
T ss_pred --H-----------------------------HHHhh---------ccCCCEEEEeccCCccccchhhHHHHHHHHHHHH
Confidence 0 00000 1269999999999999986 7777777666
Q ss_pred C---CCeEEEEecCCC-----CCCCCCC-hHHHHHHHHHHHHh
Q 022534 260 P---NVVKLQMIEGAG-----HMPQEDW-PEKVVDGLRYFFLN 293 (295)
Q Consensus 260 ~---~~~~~~~i~~~g-----H~~~~e~-p~~~~~~i~~fl~~ 293 (295)
+ .++++++++++| |+++.|. |+++++.|.+||..
T Consensus 277 ~~~g~~~~~~~~~~~gi~G~~H~~~~~~~~~~~~~~i~~fl~~ 319 (328)
T 1qlw_A 277 NAAGGKGQLMSLPALGVHGNSHMMMQDRNNLQVADLILDWIGR 319 (328)
T ss_dssp HHTTCCEEEEEGGGGTCCCCCTTGGGSTTHHHHHHHHHHHHHH
T ss_pred HHhCCCceEEEcCCCCcCCCcccchhccCHHHHHHHHHHHHHh
Confidence 5 248999999776 9999998 99999999999976
|
| >3trd_A Alpha/beta hydrolase; cellular processes; 1.50A {Coxiella burnetii} | Back alignment and structure |
|---|
Probab=99.91 E-value=1.8e-22 Score=164.69 Aligned_cols=190 Identities=14% Similarity=0.139 Sum_probs=134.7
Q ss_pred EEeCcEEEEEEEcCCCCC-CCceEEEEcCC-----CCCCccchhhHHHhhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCC
Q 022534 16 IKSGEYRWFVRETGSADS-RLGTIVFLHGA-----PSHSYSYRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFT 89 (295)
Q Consensus 16 ~~~~~~~~~~~~~g~~~~-~~~~vv~lHG~-----~~~~~~w~~~~~~l~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~ 89 (295)
...+| ++++....+..+ ++|+||++||+ ..+...|..+++.|+++||+|+++|+||||.|+.+.... ...
T Consensus 12 ~~~~g-~l~~~~~~p~~~~~~~~vv~~HG~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~~~~~---~~~ 87 (208)
T 3trd_A 12 QGPVG-QLEVMITRPKGIEKSVTGIICHPHPLHGGTMNNKVVTTLAKALDELGLKTVRFNFRGVGKSQGRYDNG---VGE 87 (208)
T ss_dssp ECSSS-EEEEEEECCSSCCCSEEEEEECSCGGGTCCTTCHHHHHHHHHHHHTTCEEEEECCTTSTTCCSCCCTT---THH
T ss_pred ECCCc-eEEEEEEcCCCCCCCCEEEEEcCCCCCCCccCCchHHHHHHHHHHCCCEEEEEecCCCCCCCCCccch---HHH
Confidence 33456 787777665432 57899999994 344556888999999889999999999999998753211 112
Q ss_pred HHHHHHHHHHHHHHhCCCCceEEEEecccchH-HHHHHHHhCcCccceeEEEcCCCCCCCCCchhhhhhhcccchhhhhh
Q 022534 90 ENEFHEELDKLLDVLEVKYPFFLVVQGFLVGS-YGLTWALKNPSRISKLAILNSPLTASSPLPGLFQQLRIPLLGEFTAQ 168 (295)
Q Consensus 90 ~~~~~~~l~~~~~~l~~~~~~~lv~~G~~~G~-~~~~~a~~~p~~v~~lil~~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (295)
.+++...+..+.+.++.+ +++++ |||+|+ +++.++ .+| +++++++++++... +
T Consensus 88 ~~d~~~~~~~l~~~~~~~-~i~l~--G~S~Gg~~a~~~a-~~~-~v~~~v~~~~~~~~------------------~--- 141 (208)
T 3trd_A 88 VEDLKAVLRWVEHHWSQD-DIWLA--GFSFGAYISAKVA-YDQ-KVAQLISVAPPVFY------------------E--- 141 (208)
T ss_dssp HHHHHHHHHHHHHHCTTC-EEEEE--EETHHHHHHHHHH-HHS-CCSEEEEESCCTTS------------------G---
T ss_pred HHHHHHHHHHHHHhCCCC-eEEEE--EeCHHHHHHHHHh-ccC-CccEEEEecccccc------------------C---
Confidence 233444444444443433 56666 777765 566666 777 89999988643300 0
Q ss_pred hHHHHHHHHHhCCCccccccccccccccccccCCchhHHHHHHHhcchhhhhHhhhcCcCCCCCCCcEEEEEeCCCCCCC
Q 022534 169 NAIMAERFIEAGSPYVLKLDKADVYRLPYLASSGPGFALLEAARKVNFKDISSRIGAGFSSGSWDKPVLVAWGISDKYLP 248 (295)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~~ 248 (295)
. + .. ...+++|+++++|++|.+++
T Consensus 142 -------------------------~--~-------------------~~----------~~~~~~p~l~i~g~~D~~~~ 165 (208)
T 3trd_A 142 -------------------------G--F-------------------AS----------LTQMASPWLIVQGDQDEVVP 165 (208)
T ss_dssp -------------------------G--G-------------------TT----------CCSCCSCEEEEEETTCSSSC
T ss_pred -------------------------C--c-------------------hh----------hhhcCCCEEEEECCCCCCCC
Confidence 0 0 00 01347999999999999999
Q ss_pred cchHHHHHhcCCCCeEEEEecCCCCCCCCCChHHHHHHHHHHHH
Q 022534 249 QSVAEEFQKGNPNVVKLQMIEGAGHMPQEDWPEKVVDGLRYFFL 292 (295)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~ 292 (295)
++.+.++.+..+..+++++++++||..+.+. +++.+.|.+||.
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~-~~~~~~i~~fl~ 208 (208)
T 3trd_A 166 FEQVKAFVNQISSPVEFVVMSGASHFFHGRL-IELRELLVRNLA 208 (208)
T ss_dssp HHHHHHHHHHSSSCCEEEEETTCCSSCTTCH-HHHHHHHHHHHC
T ss_pred HHHHHHHHHHccCceEEEEeCCCCCcccccH-HHHHHHHHHHhC
Confidence 9999999888876579999999999988775 889999999973
|
| >3ils_A PKS, aflatoxin biosynthesis polyketide synthase; A/B hydrolase, thioesterase, norsolorinic acid, P polyketide, acyltransferase; 1.70A {Aspergillus parasiticus} | Back alignment and structure |
|---|
Probab=99.91 E-value=2.6e-23 Score=176.93 Aligned_cols=224 Identities=13% Similarity=0.155 Sum_probs=140.7
Q ss_pred CCCCCCCceEEEEcCCCCCCccchhhHHHhhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCC
Q 022534 29 GSADSRLGTIVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEELDKLLDVLEVKY 108 (295)
Q Consensus 29 g~~~~~~~~vv~lHG~~~~~~~w~~~~~~l~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~ 108 (295)
+++...+++|||+||+++++..|..+++ |. .+|+|+++|+||+|.|+.+ .++++++++++.++++.+....
T Consensus 15 ~~~~~~~~~lv~lhg~~~~~~~~~~~~~-l~-~~~~v~~~d~~G~~~~~~~-------~~~~~~~~~~~~~~i~~~~~~~ 85 (265)
T 3ils_A 15 GLPMVARKTLFMLPDGGGSAFSYASLPR-LK-SDTAVVGLNCPYARDPENM-------NCTHGAMIESFCNEIRRRQPRG 85 (265)
T ss_dssp SCTTTSSEEEEEECCTTCCGGGGTTSCC-CS-SSEEEEEEECTTTTCGGGC-------CCCHHHHHHHHHHHHHHHCSSC
T ss_pred CCCCCCCCEEEEECCCCCCHHHHHHHHh-cC-CCCEEEEEECCCCCCCCCC-------CCCHHHHHHHHHHHHHHhCCCC
Confidence 3333346799999999999999999999 86 4899999999999876642 2478899999999999986555
Q ss_pred ceEEEEecccch-HHHHHHHH---hCcCccceeEEEcCCCCCCC-CCchhhhhhhcccchhhhhhhHHHHHHHHHhCC-C
Q 022534 109 PFFLVVQGFLVG-SYGLTWAL---KNPSRISKLAILNSPLTASS-PLPGLFQQLRIPLLGEFTAQNAIMAERFIEAGS-P 182 (295)
Q Consensus 109 ~~~lv~~G~~~G-~~~~~~a~---~~p~~v~~lil~~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 182 (295)
+++|+ |||+| .++..+|. .+|++++++++++++..... ..+.... . +.+.....+. +
T Consensus 86 ~~~l~--GhS~Gg~ia~~~a~~l~~~~~~v~~lvl~~~~~~~~~~~~~~~~~--------------~-~~~~~~~~~~~~ 148 (265)
T 3ils_A 86 PYHLG--GWSSGGAFAYVVAEALVNQGEEVHSLIIIDAPIPQAMEQLPRAFY--------------E-HCNSIGLFATQP 148 (265)
T ss_dssp CEEEE--EETHHHHHHHHHHHHHHHTTCCEEEEEEESCCSSCCCCCCCHHHH--------------H-HHHHTTTTTTSS
T ss_pred CEEEE--EECHhHHHHHHHHHHHHhCCCCceEEEEEcCCCCCcccccCHHHH--------------H-HHHHHHHhCCCc
Confidence 78787 67766 46777777 68889999999976543211 1110000 0 0000000000 0
Q ss_pred ccccccccccccccccccCCchhHHHHHHHhcchhhhhHhhhcCcCCCCCCCcEE-EEEeCC---CCCC-----------
Q 022534 183 YVLKLDKADVYRLPYLASSGPGFALLEAARKVNFKDISSRIGAGFSSGSWDKPVL-VAWGIS---DKYL----------- 247 (295)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l-~i~G~~---D~~~----------- 247 (295)
........+..+ .+...++ .+++.. .... ......+++|++ +|+|++ |+.+
T Consensus 149 ~~~~~~~~~~~~-----------~~~~~~~-~~~~~~-~~~~-~~~~~~i~~P~~lii~G~~~~~D~~~~~~~~~~~~~~ 214 (265)
T 3ils_A 149 GASPDGSTEPPS-----------YLIPHFT-AVVDVM-LDYK-LAPLHARRMPKVGIVWAADTVMDERDAPKMKGMHFMI 214 (265)
T ss_dssp SSCSSSCSCCCT-----------THHHHHH-HHHHHT-TTCC-CCCCCCSSCCEEEEEEEEECSSCTTTSCCCSSCCTTT
T ss_pred cccccCCHHHHH-----------HHHHHHH-HHHHHH-HhcC-CCCCccCCCCeEEEEEccCCCCccccCccccCcchhh
Confidence 000000000000 0111110 000000 0000 001236789988 999999 9877
Q ss_pred ---CcchHHHHHhcCC-CCeEEEEecCCCCCCC--CCChHHHHHHHHHHHH
Q 022534 248 ---PQSVAEEFQKGNP-NVVKLQMIEGAGHMPQ--EDWPEKVVDGLRYFFL 292 (295)
Q Consensus 248 ---~~~~~~~~~~~~~-~~~~~~~i~~~gH~~~--~e~p~~~~~~i~~fl~ 292 (295)
+......+.+..+ .++++++++||||+++ .|+|+++++.|.+||.
T Consensus 215 ~~~~~~~~~~w~~~~~~~~~~~~~i~gagH~~~~~~e~~~~v~~~i~~fL~ 265 (265)
T 3ils_A 215 QKRTEFGPDGWDTIMPGASFDIVRADGANHFTLMQKEHVSIISDLIDRVMA 265 (265)
T ss_dssp SCCCCCSCTTHHHHSTTCCEEEEEEEEEETTGGGSTTTTHHHHHHHHHHTC
T ss_pred ccccccCcchHHHhCCccceeEEEcCCCCcceeeChhhHHHHHHHHHHHhC
Confidence 3334455556555 3589999999999999 8999999999999973
|
| >2q0x_A Protein DUF1749, uncharacterized protein; alpha/beta hydrolase fold, structural genomics, structural G of pathogenic protozoa consortium; 2.20A {Trypanosoma brucei} | Back alignment and structure |
|---|
Probab=99.91 E-value=8.8e-23 Score=179.63 Aligned_cols=118 Identities=12% Similarity=0.137 Sum_probs=82.3
Q ss_pred ceeeEEeCc-EEEEEEEcC-CCCCCCceEEEEcCCCCCCcc---chhhHHHhhhCCCeEEEeC----CCCCCCCCCCCCC
Q 022534 12 YGSYIKSGE-YRWFVRETG-SADSRLGTIVFLHGAPSHSYS---YRNVMSQMSDAGFHCFAPD----WLGFGFSDKPEKG 82 (295)
Q Consensus 12 ~~~~~~~~~-~~~~~~~~g-~~~~~~~~vv~lHG~~~~~~~---w~~~~~~l~~~~~~via~D----l~G~G~S~~~~~~ 82 (295)
.|.++.+.. ..++|...| +++ .+|+|||+||+++++.. |..+++.|+ .||+|+++| +||||.|+.+.
T Consensus 14 ~g~~~~~~~~~~~~y~~~g~~~~-~~~~vvllHG~~~~~~~~~~~~~l~~~L~-~g~~Vi~~Dl~~D~~G~G~S~~~~-- 89 (335)
T 2q0x_A 14 QGHLFTYYKDPYCKIPVFMMNMD-ARRCVLWVGGQTESLLSFDYFTNLAEELQ-GDWAFVQVEVPSGKIGSGPQDHAH-- 89 (335)
T ss_dssp EEEEEEEEEETTEEEEEEEECTT-SSSEEEEECCTTCCTTCSTTHHHHHHHHT-TTCEEEEECCGGGBTTSCSCCHHH--
T ss_pred ceEEEecCCCCceeEEEeccCCC-CCcEEEEECCCCccccchhHHHHHHHHHH-CCcEEEEEeccCCCCCCCCccccC--
Confidence 456666543 567787777 332 35799999999876544 567888885 589999995 59999997421
Q ss_pred CCCCCCCHHHHHHHHHHHHHHhCCCCceEEEEecccch-HHHHHHHH--hCcCccceeEEEcC
Q 022534 83 YDDFDFTENEFHEELDKLLDVLEVKYPFFLVVQGFLVG-SYGLTWAL--KNPSRISKLAILNS 142 (295)
Q Consensus 83 ~~~~~~~~~~~~~~l~~~~~~l~~~~~~~lv~~G~~~G-~~~~~~a~--~~p~~v~~lil~~~ 142 (295)
..+++...+..+.+.+++++ ++|+ |||+| .+++.+|. .+|++|+++|++++
T Consensus 90 ------~~~d~~~~~~~l~~~l~~~~-~~Lv--GhSmGG~iAl~~A~~~~~p~rV~~lVL~~~ 143 (335)
T 2q0x_A 90 ------DAEDVDDLIGILLRDHCMNE-VALF--ATSTGTQLVFELLENSAHKSSITRVILHGV 143 (335)
T ss_dssp ------HHHHHHHHHHHHHHHSCCCC-EEEE--EEGGGHHHHHHHHHHCTTGGGEEEEEEEEE
T ss_pred ------cHHHHHHHHHHHHHHcCCCc-EEEE--EECHhHHHHHHHHHhccchhceeEEEEECC
Confidence 12344444444444567765 6676 77776 56888888 57999999999864
|
| >2qjw_A Uncharacterized protein XCC1541; putative hydrolase of the alpha/beta superfamily, structural genomics; HET: MSE TLA P6G; 1.35A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=99.90 E-value=1e-22 Score=161.69 Aligned_cols=170 Identities=15% Similarity=0.223 Sum_probs=130.0
Q ss_pred CceEEEEcCCCCCCccch--hhHHHhhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCceEE
Q 022534 35 LGTIVFLHGAPSHSYSYR--NVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEELDKLLDVLEVKYPFFL 112 (295)
Q Consensus 35 ~~~vv~lHG~~~~~~~w~--~~~~~l~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~~l 112 (295)
+|+||++||++++...|. .+++.|++.||+|+++|+||||.|+.... .....+.++++.+.+++..-.+++++
T Consensus 4 ~~~vv~~HG~~~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~l 78 (176)
T 2qjw_A 4 RGHCILAHGFESGPDALKVTALAEVAERLGWTHERPDFTDLDARRDLGQ-----LGDVRGRLQRLLEIARAATEKGPVVL 78 (176)
T ss_dssp SCEEEEECCTTCCTTSHHHHHHHHHHHHTTCEEECCCCHHHHTCGGGCT-----TCCHHHHHHHHHHHHHHHHTTSCEEE
T ss_pred CcEEEEEeCCCCCccHHHHHHHHHHHHHCCCEEEEeCCCCCCCCCCCCC-----CCCHHHHHHHHHHHHHhcCCCCCEEE
Confidence 578999999999888776 88889988899999999999999985321 12456677777777776653345777
Q ss_pred EEecccchH-HHHHHHHhCcCccceeEEEcCCCCCCCCCchhhhhhhcccchhhhhhhHHHHHHHHHhCCCccccccccc
Q 022534 113 VVQGFLVGS-YGLTWALKNPSRISKLAILNSPLTASSPLPGLFQQLRIPLLGEFTAQNAIMAERFIEAGSPYVLKLDKAD 191 (295)
Q Consensus 113 v~~G~~~G~-~~~~~a~~~p~~v~~lil~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (295)
+ |||+|+ +++.+|.++| ++++++++++.... .+
T Consensus 79 ~--G~S~Gg~~a~~~a~~~~--~~~~v~~~~~~~~~----------------------------------~~-------- 112 (176)
T 2qjw_A 79 A--GSSLGSYIAAQVSLQVP--TRALFLMVPPTKMG----------------------------------PL-------- 112 (176)
T ss_dssp E--EETHHHHHHHHHHTTSC--CSEEEEESCCSCBT----------------------------------TB--------
T ss_pred E--EECHHHHHHHHHHHhcC--hhheEEECCcCCcc----------------------------------cc--------
Confidence 6 777764 6777788888 99999885422110 00
Q ss_pred cccccccccCCchhHHHHHHHhcchhhhhHhhhcCcCCCCCCCcEEEEEeCCCCCCCcchHHHHHhcCCCCeEEEEecCC
Q 022534 192 VYRLPYLASSGPGFALLEAARKVNFKDISSRIGAGFSSGSWDKPVLVAWGISDKYLPQSVAEEFQKGNPNVVKLQMIEGA 271 (295)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~ 271 (295)
+. ...+++|+++++|++|.+++++.+..+.+.. + ++++++ ++
T Consensus 113 ----~~-------------------------------~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~-~-~~~~~~-~~ 154 (176)
T 2qjw_A 113 ----PA-------------------------------LDAAAVPISIVHAWHDELIPAADVIAWAQAR-S-ARLLLV-DD 154 (176)
T ss_dssp ----CC-------------------------------CCCCSSCEEEEEETTCSSSCHHHHHHHHHHH-T-CEEEEE-SS
T ss_pred ----Cc-------------------------------ccccCCCEEEEEcCCCCccCHHHHHHHHHhC-C-ceEEEe-CC
Confidence 00 0145799999999999999999888888776 3 689999 89
Q ss_pred CCCCCCCChHHHHHHHHHHHHhc
Q 022534 272 GHMPQEDWPEKVVDGLRYFFLNY 294 (295)
Q Consensus 272 gH~~~~e~p~~~~~~i~~fl~~~ 294 (295)
||.. .+.++++.+.|.+|+.++
T Consensus 155 ~H~~-~~~~~~~~~~i~~fl~~l 176 (176)
T 2qjw_A 155 GHRL-GAHVQAASRAFAELLQSL 176 (176)
T ss_dssp CTTC-TTCHHHHHHHHHHHHHTC
T ss_pred Cccc-cccHHHHHHHHHHHHHhC
Confidence 9998 488999999999999763
|
| >2qs9_A Retinoblastoma-binding protein 9; B5T overexpressed gene protein, BOG, RBBP9, RBBP10, HR2978, NESG, structural genomics, PSI-2; 1.72A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.90 E-value=2.6e-22 Score=162.29 Aligned_cols=175 Identities=15% Similarity=0.184 Sum_probs=126.7
Q ss_pred CceEEEEcCCCCC---Cccchh-hHHHhhhC-CCeEEEeCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCc
Q 022534 35 LGTIVFLHGAPSH---SYSYRN-VMSQMSDA-GFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEELDKLLDVLEVKYP 109 (295)
Q Consensus 35 ~~~vv~lHG~~~~---~~~w~~-~~~~l~~~-~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~ 109 (295)
+|+|||+||++++ ...|.. +++.|++. ||+|+++|+||++. .++..++.++++.++.+++
T Consensus 4 ~p~vv~lHG~~~~~~~~~~~~~~~~~~l~~~~g~~vi~~d~~g~~~---------------~~~~~~~~~~~~~l~~~~~ 68 (194)
T 2qs9_A 4 PSKAVIVPGNGGGDVTTHGWYGWVKKELEKIPGFQCLAKNMPDPIT---------------ARESIWLPFMETELHCDEK 68 (194)
T ss_dssp CCEEEEECCSSSSCTTTSTTHHHHHHHHTTSTTCCEEECCCSSTTT---------------CCHHHHHHHHHHTSCCCTT
T ss_pred CCEEEEECCCCCCCcccchHHHHHHHHHhhccCceEEEeeCCCCCc---------------ccHHHHHHHHHHHhCcCCC
Confidence 4799999999988 467877 78889876 89999999998631 1256788889999887345
Q ss_pred eEEEEecccch-HHHHHHHHhCcCccceeEEEcCCCCCCCCCchhhhhhhcccchhhhhhhHHHHHHHHHhCCCcccccc
Q 022534 110 FFLVVQGFLVG-SYGLTWALKNPSRISKLAILNSPLTASSPLPGLFQQLRIPLLGEFTAQNAIMAERFIEAGSPYVLKLD 188 (295)
Q Consensus 110 ~~lv~~G~~~G-~~~~~~a~~~p~~v~~lil~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (295)
++++ |||+| .+++.+|.++| |+++++++++..... ... .. . ..+.
T Consensus 69 ~~lv--G~S~Gg~ia~~~a~~~p--v~~lvl~~~~~~~~~---~~~-------------------~~-~---~~~~---- 114 (194)
T 2qs9_A 69 TIII--GHSSGAIAAMRYAETHR--VYAIVLVSAYTSDLG---DEN-------------------ER-A---SGYF---- 114 (194)
T ss_dssp EEEE--EETHHHHHHHHHHHHSC--CSEEEEESCCSSCTT---CHH-------------------HH-H---TSTT----
T ss_pred EEEE--EcCcHHHHHHHHHHhCC--CCEEEEEcCCccccc---hhh-------------------hH-H---Hhhh----
Confidence 7777 67766 46788889999 999999865432110 000 00 0 0000
Q ss_pred ccccccccccccCCchhHHHHHHHhcchhhhhHhhhcCcCCCCCCCcEEEEEeCCCCCCCcchHHHHHhcCCCCeEEEEe
Q 022534 189 KADVYRLPYLASSGPGFALLEAARKVNFKDISSRIGAGFSSGSWDKPVLVAWGISDKYLPQSVAEEFQKGNPNVVKLQMI 268 (295)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~i 268 (295)
..+. . .. . +. ...+|+++|+|++|.+++++.+..+.+.+ + ++++++
T Consensus 115 -----~~~~--------~-~~--------~-~~---------~~~~p~lii~G~~D~~vp~~~~~~~~~~~-~-~~~~~~ 160 (194)
T 2qs9_A 115 -----TRPW--------Q-WE--------K-IK---------ANCPYIVQFGSTDDPFLPWKEQQEVADRL-E-TKLHKF 160 (194)
T ss_dssp -----SSCC--------C-HH--------H-HH---------HHCSEEEEEEETTCSSSCHHHHHHHHHHH-T-CEEEEE
T ss_pred -----cccc--------c-HH--------H-HH---------hhCCCEEEEEeCCCCcCCHHHHHHHHHhc-C-CeEEEe
Confidence 0000 0 00 0 11 12579999999999999999999998877 5 699999
Q ss_pred cCCCCCCCCCChHHHHHHHHHHHHh
Q 022534 269 EGAGHMPQEDWPEKVVDGLRYFFLN 293 (295)
Q Consensus 269 ~~~gH~~~~e~p~~~~~~i~~fl~~ 293 (295)
+++||+++.|+|+++++.+ +||.+
T Consensus 161 ~~~gH~~~~~~p~~~~~~~-~fl~~ 184 (194)
T 2qs9_A 161 TDCGHFQNTEFHELITVVK-SLLKV 184 (194)
T ss_dssp SSCTTSCSSCCHHHHHHHH-HHHTC
T ss_pred CCCCCccchhCHHHHHHHH-HHHHh
Confidence 9999999999999998876 89976
|
| >3h04_A Uncharacterized protein; protein with unknown function, structural genomics, MCSG, PS protein structure initiative; 1.90A {Staphylococcus aureus subsp} | Back alignment and structure |
|---|
Probab=99.90 E-value=4.4e-22 Score=167.74 Aligned_cols=245 Identities=12% Similarity=0.132 Sum_probs=146.1
Q ss_pred eeEEeCcEEEEEEEcCCCC-CCCceEEEEcCCC---CCCccch-hhHHHhhhCCCeEEEeCCCCCCCCCCCCCCCCCCCC
Q 022534 14 SYIKSGEYRWFVRETGSAD-SRLGTIVFLHGAP---SHSYSYR-NVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDF 88 (295)
Q Consensus 14 ~~~~~~~~~~~~~~~g~~~-~~~~~vv~lHG~~---~~~~~w~-~~~~~l~~~~~~via~Dl~G~G~S~~~~~~~~~~~~ 88 (295)
.+.+.+|..+++..+.+.. .++|+|||+||++ ++...|. .+++.|++. |+|+++|+||+|.+..+ .
T Consensus 7 ~~~~~dg~~l~~~~~~p~~~~~~~~vv~~HG~~~~~~~~~~~~~~~~~~l~~~-~~v~~~d~~~~~~~~~~--------~ 77 (275)
T 3h04_A 7 KVITKDAFALPYTIIKAKNQPTKGVIVYIHGGGLMFGKANDLSPQYIDILTEH-YDLIQLSYRLLPEVSLD--------C 77 (275)
T ss_dssp EEECTTSCEEEEEEECCSSSSCSEEEEEECCSTTTSCCTTCSCHHHHHHHTTT-EEEEEECCCCTTTSCHH--------H
T ss_pred EEecCCcEEEEEEEEccCCCCCCCEEEEEECCcccCCchhhhHHHHHHHHHhC-ceEEeeccccCCccccc--------h
Confidence 3455678889888876543 2468999999988 6666666 777888775 99999999999876531 1
Q ss_pred CHHHHHHHHHHHHHHhCCCCceEEEEecccch-HHHHHHHHhCcCccceeEEEcCCCCCCCCCchhhhhhhcccchhhhh
Q 022534 89 TENEFHEELDKLLDVLEVKYPFFLVVQGFLVG-SYGLTWALKNPSRISKLAILNSPLTASSPLPGLFQQLRIPLLGEFTA 167 (295)
Q Consensus 89 ~~~~~~~~l~~~~~~l~~~~~~~lv~~G~~~G-~~~~~~a~~~p~~v~~lil~~~p~~~~~~~~~~~~~~~~~~~~~~~~ 167 (295)
..+++.+.+..+.+.++.+ +++++ |||+| .+++.+|.+ ++++++++++++..... ..... ..........
T Consensus 78 ~~~d~~~~~~~l~~~~~~~-~i~l~--G~S~Gg~~a~~~a~~--~~v~~~v~~~~~~~~~~---~~~~~-~~~~~~~~~~ 148 (275)
T 3h04_A 78 IIEDVYASFDAIQSQYSNC-PIFTF--GRSSGAYLSLLIARD--RDIDGVIDFYGYSRINT---EPFKT-TNSYYAKIAQ 148 (275)
T ss_dssp HHHHHHHHHHHHHHTTTTS-CEEEE--EETHHHHHHHHHHHH--SCCSEEEEESCCSCSCS---HHHHS-CCHHHHHHHT
T ss_pred hHHHHHHHHHHHHhhCCCC-CEEEE--EecHHHHHHHHHhcc--CCccEEEeccccccccc---ccccc-ccchhhcccc
Confidence 3456666677776666655 46676 77776 467777777 78999998864433211 10000 0000000000
Q ss_pred hhHHHHHHHHHhC--CCccccccccccccccccccCCchhHHHHHH-HhcchhhhhH-------hhh-cCcCCCCCCCcE
Q 022534 168 QNAIMAERFIEAG--SPYVLKLDKADVYRLPYLASSGPGFALLEAA-RKVNFKDISS-------RIG-AGFSSGSWDKPV 236 (295)
Q Consensus 168 ~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~-------~~~-~~~~~~~~~~P~ 236 (295)
. ......... ......... .......... ....+..... ... .....+.+. |+
T Consensus 149 ~---~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-P~ 212 (275)
T 3h04_A 149 S---INETMIAQLTSPTPVVQDQI------------AQRFLIYVYARGTGKWINMINIADYTDSKYNIAPDELKTLP-PV 212 (275)
T ss_dssp T---SCHHHHHTTSCSSCCSSCSS------------GGGHHHHHHHHHHTCHHHHHCCSCTTSGGGSCCHHHHTTCC-CE
T ss_pred c---chHHHHhcccCCCCcCCCcc------------ccchhhhhhhhhcCchHHhhccccccccccccccchhccCC-CE
Confidence 0 000011100 000000000 0000000000 0000000000 000 000012556 99
Q ss_pred EEEEeCCCCCCCcchHHHHHhcCCCCeEEEEecCCCCCCCCCCh---HHHHHHHHHHHHh
Q 022534 237 LVAWGISDKYLPQSVAEEFQKGNPNVVKLQMIEGAGHMPQEDWP---EKVVDGLRYFFLN 293 (295)
Q Consensus 237 l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p---~~~~~~i~~fl~~ 293 (295)
|+++|++|.+++++.+..+.+.+++ .++++++++||.++.|.| +++.+.+.+||.+
T Consensus 213 lii~G~~D~~~~~~~~~~~~~~~~~-~~~~~~~~~~H~~~~~~~~~~~~~~~~i~~fl~~ 271 (275)
T 3h04_A 213 FIAHCNGDYDVPVEESEHIMNHVPH-STFERVNKNEHDFDRRPNDEAITIYRKVVDFLNA 271 (275)
T ss_dssp EEEEETTCSSSCTHHHHHHHTTCSS-EEEEEECSSCSCTTSSCCHHHHHHHHHHHHHHHH
T ss_pred EEEecCCCCCCChHHHHHHHHhcCC-ceEEEeCCCCCCcccCCchhHHHHHHHHHHHHHH
Confidence 9999999999999999999999987 799999999999999998 6999999999986
|
| >2o2g_A Dienelactone hydrolase; YP_324580.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.92A {Anabaena variabilis} | Back alignment and structure |
|---|
Probab=99.90 E-value=4.3e-23 Score=169.47 Aligned_cols=199 Identities=18% Similarity=0.178 Sum_probs=147.9
Q ss_pred eeeEEeCcEEEEEEEcCCCCCCCceEEEEcCCCCCCccc--hhhHHHhhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCCH
Q 022534 13 GSYIKSGEYRWFVRETGSADSRLGTIVFLHGAPSHSYSY--RNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTE 90 (295)
Q Consensus 13 ~~~~~~~~~~~~~~~~g~~~~~~~~vv~lHG~~~~~~~w--~~~~~~l~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~ 90 (295)
-..++.+|..+++..+.+.+ +.|+||++||++++...| ..+++.|+++||.|+++|+||+|.|+...... ...++.
T Consensus 14 ~~~~~~~g~~l~~~~~~p~~-~~p~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~g~s~~~~~~~-~~~~~~ 91 (223)
T 2o2g_A 14 AVSVSVGEVKLKGNLVIPNG-ATGIVLFAHGSGSSRYSPRNRYVAEVLQQAGLATLLIDLLTQEEEEIDLRTR-HLRFDI 91 (223)
T ss_dssp EEEEEETTEEEEEEEECCTT-CCEEEEEECCTTCCTTCHHHHHHHHHHHHHTCEEEEECSSCHHHHHHHHHHC-SSTTCH
T ss_pred EEEEecCCeEEEEEEecCCC-CceEEEEecCCCCCCCccchHHHHHHHHHCCCEEEEEcCCCcCCCCccchhh-cccCcH
Confidence 34456689899887776543 468999999999888765 47888898779999999999999987532110 123577
Q ss_pred HHHHHHHHHHHHHhCCC-----CceEEEEecccch-HHHHHHHHhCcCccceeEEEcCCCCCCCCCchhhhhhhcccchh
Q 022534 91 NEFHEELDKLLDVLEVK-----YPFFLVVQGFLVG-SYGLTWALKNPSRISKLAILNSPLTASSPLPGLFQQLRIPLLGE 164 (295)
Q Consensus 91 ~~~~~~l~~~~~~l~~~-----~~~~lv~~G~~~G-~~~~~~a~~~p~~v~~lil~~~p~~~~~~~~~~~~~~~~~~~~~ 164 (295)
+++++|+.++++.+..+ +++.++ |||+| .+++.+|.++|+++++++++++.. .
T Consensus 92 ~~~~~d~~~~i~~l~~~~~~~~~~i~l~--G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~-------~------------ 150 (223)
T 2o2g_A 92 GLLASRLVGATDWLTHNPDTQHLKVGYF--GASTGGGAALVAAAERPETVQAVVSRGGRP-------D------------ 150 (223)
T ss_dssp HHHHHHHHHHHHHHHHCTTTTTSEEEEE--EETHHHHHHHHHHHHCTTTEEEEEEESCCG-------G------------
T ss_pred HHHHHHHHHHHHHHHhCcCCCCCcEEEE--EeCccHHHHHHHHHhCCCceEEEEEeCCCC-------C------------
Confidence 88999999999887533 146666 67765 567888889999999999885310 0
Q ss_pred hhhhhHHHHHHHHHhCCCccccccccccccccccccCCchhHHHHHHHhcchhhhhHhhhcCcCCCCCCCcEEEEEeCCC
Q 022534 165 FTAQNAIMAERFIEAGSPYVLKLDKADVYRLPYLASSGPGFALLEAARKVNFKDISSRIGAGFSSGSWDKPVLVAWGISD 244 (295)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D 244 (295)
. . .... .++++|+++++|++|
T Consensus 151 ~---------------~-----------------------------------~~~~---------~~~~~P~l~i~g~~D 171 (223)
T 2o2g_A 151 L---------------A-----------------------------------PSAL---------PHVKAPTLLIVGGYD 171 (223)
T ss_dssp G---------------C-----------------------------------TTTG---------GGCCSCEEEEEETTC
T ss_pred c---------------C-----------------------------------HHHH---------hcCCCCEEEEEcccc
Confidence 0 0 0000 134799999999999
Q ss_pred CCCCcchHHHHHhcCCCCeEEEEecCCCCCCCC-CChHHHHHHHHHHHHhc
Q 022534 245 KYLPQSVAEEFQKGNPNVVKLQMIEGAGHMPQE-DWPEKVVDGLRYFFLNY 294 (295)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~-e~p~~~~~~i~~fl~~~ 294 (295)
++++.+..+.+.+..++ +++++++++||.... +.++++.+.+.+|+.+.
T Consensus 172 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~~ 221 (223)
T 2o2g_A 172 LPVIAMNEDALEQLQTS-KRLVIIPRASHLFEEPGALTAVAQLASEWFMHY 221 (223)
T ss_dssp HHHHHHHHHHHHHCCSS-EEEEEETTCCTTCCSTTHHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHhhCCC-eEEEEeCCCCcccCChHHHHHHHHHHHHHHHHh
Confidence 98876666666665554 899999999999766 56899999999999863
|
| >1jfr_A Lipase; serine hydrolase; 1.90A {Streptomyces exfoliatus} SCOP: c.69.1.16 | Back alignment and structure |
|---|
Probab=99.89 E-value=4.1e-22 Score=168.75 Aligned_cols=181 Identities=16% Similarity=0.168 Sum_probs=134.7
Q ss_pred CcEEEEEEEcCCCCCCCceEEEEcCCCCCCccchhhHHHhhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH
Q 022534 19 GEYRWFVRETGSADSRLGTIVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEELD 98 (295)
Q Consensus 19 ~~~~~~~~~~g~~~~~~~~vv~lHG~~~~~~~w~~~~~~l~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~l~ 98 (295)
++..+++...+. +.+.|+|||+||++++...|..+++.|+++||+|+++|+||+|.|.... ..++...+.
T Consensus 39 ~~~~l~~p~~~~-~~~~p~vv~~HG~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~g~~~~~~---------~~d~~~~~~ 108 (262)
T 1jfr_A 39 GGGTIYYPTSTA-DGTFGAVVISPGFTAYQSSIAWLGPRLASQGFVVFTIDTNTTLDQPDSR---------GRQLLSALD 108 (262)
T ss_dssp CCEEEEEESCCT-TCCEEEEEEECCTTCCGGGTTTHHHHHHTTTCEEEEECCSSTTCCHHHH---------HHHHHHHHH
T ss_pred CceeEEecCCCC-CCCCCEEEEeCCcCCCchhHHHHHHHHHhCCCEEEEeCCCCCCCCCchh---------HHHHHHHHH
Confidence 457888876532 2345799999999999999999999998889999999999999765310 122323333
Q ss_pred HHHH------HhCCCCceEEEEecccch-HHHHHHHHhCcCccceeEEEcCCCCCCCCCchhhhhhhcccchhhhhhhHH
Q 022534 99 KLLD------VLEVKYPFFLVVQGFLVG-SYGLTWALKNPSRISKLAILNSPLTASSPLPGLFQQLRIPLLGEFTAQNAI 171 (295)
Q Consensus 99 ~~~~------~l~~~~~~~lv~~G~~~G-~~~~~~a~~~p~~v~~lil~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (295)
.+.+ .++.+ +++++ |||+| .+++.+|.++|+ |++++++++ ...
T Consensus 109 ~l~~~~~~~~~~~~~-~i~l~--G~S~Gg~~a~~~a~~~p~-v~~~v~~~p-~~~------------------------- 158 (262)
T 1jfr_A 109 YLTQRSSVRTRVDAT-RLGVM--GHSMGGGGSLEAAKSRTS-LKAAIPLTG-WNT------------------------- 158 (262)
T ss_dssp HHHHTSTTGGGEEEE-EEEEE--EETHHHHHHHHHHHHCTT-CSEEEEESC-CCS-------------------------
T ss_pred HHHhccccccccCcc-cEEEE--EEChhHHHHHHHHhcCcc-ceEEEeecc-cCc-------------------------
Confidence 3322 23333 46666 77776 467788889998 899988742 110
Q ss_pred HHHHHHHhCCCccccccccccccccccccCCchhHHHHHHHhcchhhhhHhhhcCcCCCCCCCcEEEEEeCCCCCCCcch
Q 022534 172 MAERFIEAGSPYVLKLDKADVYRLPYLASSGPGFALLEAARKVNFKDISSRIGAGFSSGSWDKPVLVAWGISDKYLPQSV 251 (295)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~~~~~ 251 (295)
. .. ..++++|+|+++|++|.+++.+.
T Consensus 159 ----------------------~-----------------------~~---------~~~~~~P~l~i~G~~D~~~~~~~ 184 (262)
T 1jfr_A 159 ----------------------D-----------------------KT---------WPELRTPTLVVGADGDTVAPVAT 184 (262)
T ss_dssp ----------------------C-----------------------CC---------CTTCCSCEEEEEETTCSSSCTTT
T ss_pred ----------------------c-----------------------cc---------ccccCCCEEEEecCccccCCchh
Confidence 0 00 01457999999999999999988
Q ss_pred -HHHHHhcCCC--CeEEEEecCCCCCCCCCChHHHHHHHHHHHHh
Q 022534 252 -AEEFQKGNPN--VVKLQMIEGAGHMPQEDWPEKVVDGLRYFFLN 293 (295)
Q Consensus 252 -~~~~~~~~~~--~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 293 (295)
+..+.+.+++ .+++++++++||..+.++++++.+.|.+||..
T Consensus 185 ~~~~~~~~l~~~~~~~~~~~~~~~H~~~~~~~~~~~~~i~~fl~~ 229 (262)
T 1jfr_A 185 HSKPFYESLPGSLDKAYLELRGASHFTPNTSDTTIAKYSISWLKR 229 (262)
T ss_dssp THHHHHHHSCTTSCEEEEEETTCCTTGGGSCCHHHHHHHHHHHHH
T ss_pred hHHHHHHHhhcCCCceEEEeCCCCcCCcccchHHHHHHHHHHHHH
Confidence 8888887754 35999999999999999999999999999976
|
| >1isp_A Lipase; alpha/beta hydrolase fold, hydrolase; 1.30A {Bacillus subtilis} SCOP: c.69.1.18 PDB: 1i6w_A 1r4z_A* 1r50_A* 2qxu_A 2qxt_A 1t4m_A 1t2n_A 3d2a_A 3qzu_A 3d2b_A 3d2c_A 3qmm_A | Back alignment and structure |
|---|
Probab=99.89 E-value=3.2e-22 Score=160.04 Aligned_cols=167 Identities=15% Similarity=0.183 Sum_probs=130.3
Q ss_pred CceEEEEcCCCCCCccchhhHHHhhhCCC---eEEEeCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCceE
Q 022534 35 LGTIVFLHGAPSHSYSYRNVMSQMSDAGF---HCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEELDKLLDVLEVKYPFF 111 (295)
Q Consensus 35 ~~~vv~lHG~~~~~~~w~~~~~~l~~~~~---~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~~ 111 (295)
+|+|||+||++++...|..+++.|.+.|| +|+++|+||+|.|.. ++.+++++++.+++++++.++ ++
T Consensus 3 ~~~vv~~HG~~~~~~~~~~~~~~l~~~G~~~~~v~~~d~~g~g~s~~---------~~~~~~~~~~~~~~~~~~~~~-~~ 72 (181)
T 1isp_A 3 HNPVVMVHGIGGASFNFAGIKSYLVSQGWSRDKLYAVDFWDKTGTNY---------NNGPVLSRFVQKVLDETGAKK-VD 72 (181)
T ss_dssp CCCEEEECCTTCCGGGGHHHHHHHHHTTCCGGGEEECCCSCTTCCHH---------HHHHHHHHHHHHHHHHHCCSC-EE
T ss_pred CCeEEEECCcCCCHhHHHHHHHHHHHcCCCCccEEEEecCCCCCchh---------hhHHHHHHHHHHHHHHcCCCe-EE
Confidence 46899999999999999999999998887 799999999998863 245789999999999998764 66
Q ss_pred EEEecccchH-HHHHHHHhC--cCccceeEEEcCCCCCCCCCchhhhhhhcccchhhhhhhHHHHHHHHHhCCCcccccc
Q 022534 112 LVVQGFLVGS-YGLTWALKN--PSRISKLAILNSPLTASSPLPGLFQQLRIPLLGEFTAQNAIMAERFIEAGSPYVLKLD 188 (295)
Q Consensus 112 lv~~G~~~G~-~~~~~a~~~--p~~v~~lil~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (295)
++ |||+|+ +++.++.++ |++|+++++++++..... ..
T Consensus 73 lv--G~S~Gg~~a~~~~~~~~~~~~v~~~v~~~~~~~~~~--------------------------------~~------ 112 (181)
T 1isp_A 73 IV--AHSMGGANTLYYIKNLDGGNKVANVVTLGGANRLTT--------------------------------GK------ 112 (181)
T ss_dssp EE--EETHHHHHHHHHHHHSSGGGTEEEEEEESCCGGGTC--------------------------------SB------
T ss_pred EE--EECccHHHHHHHHHhcCCCceEEEEEEEcCcccccc--------------------------------cc------
Confidence 76 777764 677778887 999999999865321000 00
Q ss_pred ccccccccccccCCchhHHHHHHHhcchhhhhHhhhcCcCCCCCCCcEEEEEeCCCCCCCcchHHHHHhcCCCCeEEEEe
Q 022534 189 KADVYRLPYLASSGPGFALLEAARKVNFKDISSRIGAGFSSGSWDKPVLVAWGISDKYLPQSVAEEFQKGNPNVVKLQMI 268 (295)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~i 268 (295)
..+ . .+ ...++|+++|+|++|.+++++.+ ..++ ++++++
T Consensus 113 -----~~~--~-----------------~~-----------~~~~~p~l~i~G~~D~~v~~~~~-----~~~~-~~~~~~ 151 (181)
T 1isp_A 113 -----ALP--G-----------------TD-----------PNQKILYTSIYSSADMIVMNYLS-----RLDG-ARNVQI 151 (181)
T ss_dssp -----CCC--C-----------------SC-----------TTCCCEEEEEEETTCSSSCHHHH-----CCBT-SEEEEE
T ss_pred -----cCC--C-----------------CC-----------CccCCcEEEEecCCCcccccccc-----cCCC-Ccceee
Confidence 000 0 00 01258999999999999987632 3665 699999
Q ss_pred cCCCCCCCCCChHHHHHHHHHHHHh
Q 022534 269 EGAGHMPQEDWPEKVVDGLRYFFLN 293 (295)
Q Consensus 269 ~~~gH~~~~e~p~~~~~~i~~fl~~ 293 (295)
+++||+.+.++| ++.+.|.+||..
T Consensus 152 ~~~gH~~~~~~~-~~~~~i~~fl~~ 175 (181)
T 1isp_A 152 HGVGHIGLLYSS-QVNSLIKEGLNG 175 (181)
T ss_dssp SSCCTGGGGGCH-HHHHHHHHHHTT
T ss_pred ccCchHhhccCH-HHHHHHHHHHhc
Confidence 999999999997 799999999975
|
| >3fcy_A Xylan esterase 1; alpha/beta hydrolase, carbohydrate esterase, CE7; 2.10A {Thermoanaerobacterium SP} | Back alignment and structure |
|---|
Probab=99.89 E-value=3.6e-21 Score=169.52 Aligned_cols=237 Identities=15% Similarity=0.171 Sum_probs=146.2
Q ss_pred eeEEeCcEEEEEEEcCCC-CCCCceEEEEcCCCCCCccchhhHHHhhhCCCeEEEeCCCCCCCCCCCCCCC---------
Q 022534 14 SYIKSGEYRWFVRETGSA-DSRLGTIVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGY--------- 83 (295)
Q Consensus 14 ~~~~~~~~~~~~~~~g~~-~~~~~~vv~lHG~~~~~~~w~~~~~~l~~~~~~via~Dl~G~G~S~~~~~~~--------- 83 (295)
.+...+|.++++..+.+. ..+.|+||++||++++...|..++..+ +.||.|+++|+||||.|+.+....
T Consensus 86 ~~~~~~g~~l~~~~~~P~~~~~~p~vv~~HG~g~~~~~~~~~~~~~-~~G~~v~~~D~rG~g~s~~~~~~~~~~~~~~~~ 164 (346)
T 3fcy_A 86 YFTGVRGARIHAKYIKPKTEGKHPALIRFHGYSSNSGDWNDKLNYV-AAGFTVVAMDVRGQGGQSQDVGGVTGNTLNGHI 164 (346)
T ss_dssp EEECGGGCEEEEEEEEESCSSCEEEEEEECCTTCCSCCSGGGHHHH-TTTCEEEEECCTTSSSSCCCCCCCSSCCSBCSS
T ss_pred EEEcCCCCEEEEEEEecCCCCCcCEEEEECCCCCCCCChhhhhHHH-hCCcEEEEEcCCCCCCCCCCCcccCCCCcCcce
Confidence 344447778887766443 234689999999999999999888655 469999999999999998653211
Q ss_pred ------CCCCCCHHHHHHHHHHHHHHhCC----C-CceEEEEecccch-HHHHHHHHhCcCccceeEEEcCCCCCCCCCc
Q 022534 84 ------DDFDFTENEFHEELDKLLDVLEV----K-YPFFLVVQGFLVG-SYGLTWALKNPSRISKLAILNSPLTASSPLP 151 (295)
Q Consensus 84 ------~~~~~~~~~~~~~l~~~~~~l~~----~-~~~~lv~~G~~~G-~~~~~~a~~~p~~v~~lil~~~p~~~~~~~~ 151 (295)
....+.......|+...++.+.. + +++.++ |+|+| .+++.+|..+|+ |+++++++ |.... ..
T Consensus 165 ~~g~~~~~~~~~~~~~~~D~~~a~~~l~~~~~~d~~~i~l~--G~S~GG~la~~~a~~~p~-v~~~vl~~-p~~~~--~~ 238 (346)
T 3fcy_A 165 IRGLDDDADNMLFRHIFLDTAQLAGIVMNMPEVDEDRVGVM--GPSQGGGLSLACAALEPR-VRKVVSEY-PFLSD--YK 238 (346)
T ss_dssp STTTTSCGGGCHHHHHHHHHHHHHHHHHTSTTEEEEEEEEE--EETHHHHHHHHHHHHSTT-CCEEEEES-CSSCC--HH
T ss_pred eccccCCHHHHHHHHHHHHHHHHHHHHHhCCCCCcCcEEEE--EcCHHHHHHHHHHHhCcc-ccEEEECC-CcccC--HH
Confidence 11122334556676666665421 1 235555 67765 578888899998 99999884 43221 00
Q ss_pred hhhhhhhcccchhhhhhhHHHHHHHHHhCCCccccccccccccccccccCCchhHHHHHHHhcchhhhhHhhhcCcCCCC
Q 022534 152 GLFQQLRIPLLGEFTAQNAIMAERFIEAGSPYVLKLDKADVYRLPYLASSGPGFALLEAARKVNFKDISSRIGAGFSSGS 231 (295)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (295)
....... ..... .. ...+.....+. ..............+ ....+ .+
T Consensus 239 ---~~~~~~~-~~~~~--~~-~~~~~~~~~~~-----------------~~~~~~~~~~~~~~d---~~~~~------~~ 285 (346)
T 3fcy_A 239 ---RVWDLDL-AKNAY--QE-ITDYFRLFDPR-----------------HERENEVFTKLGYID---VKNLA------KR 285 (346)
T ss_dssp ---HHHHTTC-CCGGG--HH-HHHHHHHHCTT-----------------CTTHHHHHHHHGGGC---HHHHG------GG
T ss_pred ---HHhhccc-cccch--HH-HHHHHHhcCCC-----------------cchHHHHHHHhCccc---HHHHH------Hh
Confidence 0000000 00000 00 01111100000 000011111111111 11111 25
Q ss_pred CCCcEEEEEeCCCCCCCcchHHHHHhcCCCCeEEEEecCCCCCCCCCChHHHHHHHHHHHHhc
Q 022534 232 WDKPVLVAWGISDKYLPQSVAEEFQKGNPNVVKLQMIEGAGHMPQEDWPEKVVDGLRYFFLNY 294 (295)
Q Consensus 232 ~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~ 294 (295)
+++|+|+++|++|.+++++.+..+.+.++..+++++++++||..+ +++.+.+.+||.++
T Consensus 286 i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~----~~~~~~i~~fl~~l 344 (346)
T 3fcy_A 286 IKGDVLMCVGLMDQVCPPSTVFAAYNNIQSKKDIKVYPDYGHEPM----RGFGDLAMQFMLEL 344 (346)
T ss_dssp CCSEEEEEEETTCSSSCHHHHHHHHTTCCSSEEEEEETTCCSSCC----TTHHHHHHHHHHTT
T ss_pred cCCCEEEEeeCCCCcCCHHHHHHHHHhcCCCcEEEEeCCCCCcCH----HHHHHHHHHHHHHh
Confidence 689999999999999999999889888875589999999999987 66788899999874
|
| >2k2q_B Surfactin synthetase thioesterase subunit; A/B-hydrolase, NRPS, non-ribosomal peptide synthetase, type II thioesterase, antibiotic biosynthesis; NMR {Bacillus subtilis} PDB: 2ron_A | Back alignment and structure |
|---|
Probab=99.89 E-value=8.8e-23 Score=170.83 Aligned_cols=213 Identities=19% Similarity=0.253 Sum_probs=125.0
Q ss_pred CceEEEEcCCCCCCccchhhHHHhhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCC--CceEE
Q 022534 35 LGTIVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEELDKLLDVLEVK--YPFFL 112 (295)
Q Consensus 35 ~~~vv~lHG~~~~~~~w~~~~~~l~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~--~~~~l 112 (295)
+++|||+||+++++..|..+++.|++ +|+|+++|+||||.|+.+. .+++.+.+.++++++++. .+++|
T Consensus 13 ~~~lv~lhg~g~~~~~~~~~~~~L~~-~~~vi~~Dl~GhG~S~~~~---------~~~~~~~~~~~~~~l~~~~~~~~~l 82 (242)
T 2k2q_B 13 KTQLICFPFAGGYSASFRPLHAFLQG-ECEMLAAEPPGHGTNQTSA---------IEDLEELTDLYKQELNLRPDRPFVL 82 (242)
T ss_dssp CCEEESSCCCCHHHHHHHHHHHHHCC-SCCCEEEECCSSCCSCCCT---------TTHHHHHHHHTTTTCCCCCCSSCEE
T ss_pred CceEEEECCCCCCHHHHHHHHHhCCC-CeEEEEEeCCCCCCCCCCC---------cCCHHHHHHHHHHHHHhhcCCCEEE
Confidence 56899999999999999999999975 7999999999999997531 235666666666667652 45777
Q ss_pred EEecccch-HHHHHHHHh------CcCccceeEEEcCCCCCCCCCchhhhhhhcccchhhhhhhHHHHHHHHHh-CCC-c
Q 022534 113 VVQGFLVG-SYGLTWALK------NPSRISKLAILNSPLTASSPLPGLFQQLRIPLLGEFTAQNAIMAERFIEA-GSP-Y 183 (295)
Q Consensus 113 v~~G~~~G-~~~~~~a~~------~p~~v~~lil~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~ 183 (295)
+ |||+| .+|..+|.+ +|++ +++.+++...... ..... .. ... ....+... ..+ .
T Consensus 83 v--GhSmGG~iA~~~A~~~~~~~~~p~~---v~l~~~~~~~~~~--~~~~~-----~~----~~~-~~~~~~~~~~~~~~ 145 (242)
T 2k2q_B 83 F--GHSMGGMITFRLAQKLEREGIFPQA---VIISAIQPPHIQR--KKVSH-----LP----DDQ-FLDHIIQLGGMPAE 145 (242)
T ss_dssp E--CCSSCCHHHHHHHHHHHHHHCSSCS---EEEEEEECSCCCS--CCCSS-----CT----THH-HHHTTCCTTCCCCT
T ss_pred E--eCCHhHHHHHHHHHHHHHcCCCCCE---EEEECCCCCCCCc--ccccC-----CC----HHH-HHHHHHHhCCCChH
Confidence 7 78765 678888876 5664 3433221110000 00000 00 000 00000000 000 0
Q ss_pred cccccccccccccccccCCchhHHHHHHHhcchhhhhHhhhcCcCCCCCCCcEEEEEeCCCCCCCcchHHHHHhcCCCCe
Q 022534 184 VLKLDKADVYRLPYLASSGPGFALLEAARKVNFKDISSRIGAGFSSGSWDKPVLVAWGISDKYLPQSVAEEFQKGNPNVV 263 (295)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~ 263 (295)
... ....... ..+. +....... .... .....++++|+|+|+|++|.+++ .....+.+..++ .
T Consensus 146 ~~~--~~~~~~~-----~~~~--~~~~~~~~------~~~~-~~~l~~i~~P~lvi~G~~D~~~~-~~~~~~~~~~~~-~ 207 (242)
T 2k2q_B 146 LVE--NKEVMSF-----FLPS--FRSDYRAL------EQFE-LYDLAQIQSPVHVFNGLDDKKCI-RDAEGWKKWAKD-I 207 (242)
T ss_dssp TTH--HHHTTTT-----CCSC--HHHHHHHH------TCCC-CSCCTTCCCSEEEEEECSSCCHH-HHHHHHHTTCCC-S
T ss_pred Hhc--CHHHHHH-----HHHH--HHHHHHHH------Hhcc-cCCCCccCCCEEEEeeCCCCcCH-HHHHHHHHHhcC-C
Confidence 000 0000000 0000 00000000 0000 00023689999999999998764 445666666776 5
Q ss_pred EEEEecCCCCCCCCCChHHHHHHHHHHHHh
Q 022534 264 KLQMIEGAGHMPQEDWPEKVVDGLRYFFLN 293 (295)
Q Consensus 264 ~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 293 (295)
+++++++ ||++++|+|++|++.|.+|+..
T Consensus 208 ~~~~~~~-gH~~~~e~p~~~~~~i~~fl~~ 236 (242)
T 2k2q_B 208 TFHQFDG-GHMFLLSQTEEVAERIFAILNQ 236 (242)
T ss_dssp EEEEEEC-CCSHHHHHCHHHHHHHHHHHHT
T ss_pred eEEEEeC-CceeEcCCHHHHHHHHHHHhhc
Confidence 7888985 9999999999999999999975
|
| >1zi8_A Carboxymethylenebutenolidase; alpha and beta proteins, 3-D structure, serine esterase, HYD aromatic hydrocarbons, catabolism; 1.40A {Pseudomonas putida} PDB: 1zj5_A* 1zi9_A 1zi6_A 1zj4_A* 1din_A 1ziy_A* 1zic_A 1zix_A 1ggv_A* | Back alignment and structure |
|---|
Probab=99.88 E-value=7.7e-22 Score=163.60 Aligned_cols=195 Identities=15% Similarity=0.120 Sum_probs=142.9
Q ss_pred eCcEEEEEEEcCCCCCCCceEEEEcCCCCCCccchhhHHHhhhCCCeEEEeCCCCCCCCCCCCCCC----------CCCC
Q 022534 18 SGEYRWFVRETGSADSRLGTIVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGY----------DDFD 87 (295)
Q Consensus 18 ~~~~~~~~~~~g~~~~~~~~vv~lHG~~~~~~~w~~~~~~l~~~~~~via~Dl~G~G~S~~~~~~~----------~~~~ 87 (295)
.+|..+++....+.+.++|+||++||++++...|..+++.|+++||.|+++|+||||.|....... ....
T Consensus 11 ~~g~~l~~~~~~p~~~~~p~vv~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~ 90 (236)
T 1zi8_A 11 YDGHTFGALVGSPAKAPAPVIVIAQDIFGVNAFMRETVSWLVDQGYAAVCPDLYARQAPGTALDPQDERQREQAYKLWQA 90 (236)
T ss_dssp TTSCEECEEEECCSSCSEEEEEEECCTTBSCHHHHHHHHHHHHTTCEEEEECGGGGTSTTCBCCTTCHHHHHHHHHHHHH
T ss_pred CCCCeEEEEEECCCCCCCCEEEEEcCCCCCCHHHHHHHHHHHhCCcEEEeccccccCCCcccccccchhhhhhhhhhhhc
Confidence 467777776666544456789999999999999999999999889999999999999987532110 0012
Q ss_pred CCHHHHHHHHHHHHHHhCC----CCceEEEEecccch-HHHHHHHHhCcCccceeEEEcCCCCCCCCCchhhhhhhcccc
Q 022534 88 FTENEFHEELDKLLDVLEV----KYPFFLVVQGFLVG-SYGLTWALKNPSRISKLAILNSPLTASSPLPGLFQQLRIPLL 162 (295)
Q Consensus 88 ~~~~~~~~~l~~~~~~l~~----~~~~~lv~~G~~~G-~~~~~~a~~~p~~v~~lil~~~p~~~~~~~~~~~~~~~~~~~ 162 (295)
++.+...+|+.++++.+.. ..++.++ |||+| .+++.+|.++| +++++++.+... .
T Consensus 91 ~~~~~~~~d~~~~~~~l~~~~~~~~~i~l~--G~S~Gg~~a~~~a~~~~--~~~~v~~~~~~~---------~------- 150 (236)
T 1zi8_A 91 FDMEAGVGDLEAAIRYARHQPYSNGKVGLV--GYSLGGALAFLVASKGY--VDRAVGYYGVGL---------E------- 150 (236)
T ss_dssp CCHHHHHHHHHHHHHHHTSSTTEEEEEEEE--EETHHHHHHHHHHHHTC--SSEEEEESCSSG---------G-------
T ss_pred cCcchhhHHHHHHHHHHHhccCCCCCEEEE--EECcCHHHHHHHhccCC--ccEEEEecCccc---------c-------
Confidence 3556778899999998752 2346666 77776 46778888888 887776632100 0
Q ss_pred hhhhhhhHHHHHHHHHhCCCccccccccccccccccccCCchhHHHHHHHhcchhhhhHhhhcCcCCCCCCCcEEEEEeC
Q 022534 163 GEFTAQNAIMAERFIEAGSPYVLKLDKADVYRLPYLASSGPGFALLEAARKVNFKDISSRIGAGFSSGSWDKPVLVAWGI 242 (295)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~ 242 (295)
+. .... .++++|+++++|+
T Consensus 151 ----------------------------~~------------------------~~~~---------~~~~~P~l~i~g~ 169 (236)
T 1zi8_A 151 ----------------------------KQ------------------------LNKV---------PEVKHPALFHMGG 169 (236)
T ss_dssp ----------------------------GC------------------------GGGG---------GGCCSCEEEEEET
T ss_pred ----------------------------cc------------------------hhhh---------hhcCCCEEEEecC
Confidence 00 0000 1347999999999
Q ss_pred CCCCCCcchHHHHHhcC---CCCeEEEEecCCCCCCCCCCh--------HHHHHHHHHHHHhc
Q 022534 243 SDKYLPQSVAEEFQKGN---PNVVKLQMIEGAGHMPQEDWP--------EKVVDGLRYFFLNY 294 (295)
Q Consensus 243 ~D~~~~~~~~~~~~~~~---~~~~~~~~i~~~gH~~~~e~p--------~~~~~~i~~fl~~~ 294 (295)
+|.+++.+.+..+.+.+ + .+++++++++||....+.+ +++.+.+.+||.+.
T Consensus 170 ~D~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~i~~fl~~~ 231 (236)
T 1zi8_A 170 QDHFVPAPSRQLITEGFGANP-LLQVHWYEEAGHSFARTGSSGYVASAAALANERTLDFLVPL 231 (236)
T ss_dssp TCTTSCHHHHHHHHHHHTTCT-TEEEEEETTCCTTTTCTTSTTCCHHHHHHHHHHHHHHHGGG
T ss_pred CCCCCCHHHHHHHHHHHHhCC-CceEEEECCCCcccccCCCCccCHHHHHHHHHHHHHHHHHh
Confidence 99999998888887766 4 5899999999998877754 57889999999863
|
| >2fuk_A XC6422 protein; A/B hydrolase, structural genomics, X-RAY diffraction; 1.60A {Xanthomonas campestris} SCOP: c.69.1.36 | Back alignment and structure |
|---|
Probab=99.88 E-value=8.8e-21 Score=155.77 Aligned_cols=191 Identities=13% Similarity=0.087 Sum_probs=133.5
Q ss_pred eeEEeCcEEEEEEEcCCCC---CCCceEEEEcCCC---C--CCccchhhHHHhhhCCCeEEEeCCCCCCCCCCCCCCCCC
Q 022534 14 SYIKSGEYRWFVRETGSAD---SRLGTIVFLHGAP---S--HSYSYRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDD 85 (295)
Q Consensus 14 ~~~~~~~~~~~~~~~g~~~---~~~~~vv~lHG~~---~--~~~~w~~~~~~l~~~~~~via~Dl~G~G~S~~~~~~~~~ 85 (295)
.++...+..+.+..+.+.+ +.+|+||++||++ + +...|..+++.|+++||+|+++|+||||.|+.+...
T Consensus 13 ~~~~~~~g~~~~~~~~p~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~~~~--- 89 (220)
T 2fuk_A 13 LTLDGPVGPLDVAVDLPEPDVAVQPVTAIVCHPLSTEGGSMHNKVVTMAARALRELGITVVRFNFRSVGTSAGSFDH--- 89 (220)
T ss_dssp EEEEETTEEEEEEEECCCTTSCCCSEEEEEECSCTTTTCSTTCHHHHHHHHHHHTTTCEEEEECCTTSTTCCSCCCT---
T ss_pred EEEeCCCCeEEEEEEeCCCCCccccCEEEEECCCCCcCCcccchHHHHHHHHHHHCCCeEEEEecCCCCCCCCCccc---
Confidence 3444444356554444322 2368999999953 2 334478888999888999999999999999865321
Q ss_pred CCCCHHHHHHHHHHHHHHhCC---CCceEEEEecccchH-HHHHHHHhCcCccceeEEEcCCCCCCCCCchhhhhhhccc
Q 022534 86 FDFTENEFHEELDKLLDVLEV---KYPFFLVVQGFLVGS-YGLTWALKNPSRISKLAILNSPLTASSPLPGLFQQLRIPL 161 (295)
Q Consensus 86 ~~~~~~~~~~~l~~~~~~l~~---~~~~~lv~~G~~~G~-~~~~~a~~~p~~v~~lil~~~p~~~~~~~~~~~~~~~~~~ 161 (295)
.....+|+.++++.+.. .++++++ |||+|+ +++.+|.++ +|+++++++++.....
T Consensus 90 ----~~~~~~d~~~~~~~l~~~~~~~~i~l~--G~S~Gg~~a~~~a~~~--~v~~~v~~~~~~~~~~------------- 148 (220)
T 2fuk_A 90 ----GDGEQDDLRAVAEWVRAQRPTDTLWLA--GFSFGAYVSLRAAAAL--EPQVLISIAPPAGRWD------------- 148 (220)
T ss_dssp ----TTHHHHHHHHHHHHHHHHCTTSEEEEE--EETHHHHHHHHHHHHH--CCSEEEEESCCBTTBC-------------
T ss_pred ----CchhHHHHHHHHHHHHhcCCCCcEEEE--EECHHHHHHHHHHhhc--cccEEEEecccccchh-------------
Confidence 13455666666655421 2346666 777764 566777666 8999998864221100
Q ss_pred chhhhhhhHHHHHHHHHhCCCccccccccccccccccccCCchhHHHHHHHhcchhhhhHhhhcCcCCCCCCCcEEEEEe
Q 022534 162 LGEFTAQNAIMAERFIEAGSPYVLKLDKADVYRLPYLASSGPGFALLEAARKVNFKDISSRIGAGFSSGSWDKPVLVAWG 241 (295)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G 241 (295)
+ .. + ...+|+++++|
T Consensus 149 -------------------------------~-----------------------~~----~-------~~~~p~l~i~g 163 (220)
T 2fuk_A 149 -------------------------------F-----------------------SD----V-------QPPAQWLVIQG 163 (220)
T ss_dssp -------------------------------C-----------------------TT----C-------CCCSSEEEEEE
T ss_pred -------------------------------h-----------------------hh----c-------ccCCcEEEEEC
Confidence 0 00 0 11589999999
Q ss_pred CCCCCCCcchHHHHHhcCCCCeEEEEecCCCCCCCCCChHHHHHHHHHHHHhc
Q 022534 242 ISDKYLPQSVAEEFQKGNPNVVKLQMIEGAGHMPQEDWPEKVVDGLRYFFLNY 294 (295)
Q Consensus 242 ~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~ 294 (295)
++|++++.+.+..+.+.+...+++++++++||..+. +++++.+.+.+|+..+
T Consensus 164 ~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~-~~~~~~~~i~~~l~~~ 215 (220)
T 2fuk_A 164 DADEIVDPQAVYDWLETLEQQPTLVRMPDTSHFFHR-KLIDLRGALQHGVRRW 215 (220)
T ss_dssp TTCSSSCHHHHHHHHTTCSSCCEEEEETTCCTTCTT-CHHHHHHHHHHHHGGG
T ss_pred CCCcccCHHHHHHHHHHhCcCCcEEEeCCCCceehh-hHHHHHHHHHHHHHHH
Confidence 999999999999999888334799999999999887 4889999999999864
|
| >1uxo_A YDEN protein; hydrolase, A/B hydrolase, esterase, PSI, protein structure initiative, MCSG, midwest center for structural genomics; 1.8A {Bacillus subtilis} SCOP: c.69.1.31 | Back alignment and structure |
|---|
Probab=99.88 E-value=2.1e-21 Score=156.46 Aligned_cols=177 Identities=14% Similarity=0.191 Sum_probs=128.3
Q ss_pred ceEEEEcCCCCCCc-cchhhHH-HhhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCceEEE
Q 022534 36 GTIVFLHGAPSHSY-SYRNVMS-QMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEELDKLLDVLEVKYPFFLV 113 (295)
Q Consensus 36 ~~vv~lHG~~~~~~-~w~~~~~-~l~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~~lv 113 (295)
|+|||+||++++.. .|...+. .|++.||+|+++|+| .|+.+ +.+++++++.++++.+ .+ +++++
T Consensus 5 p~vv~~HG~~~~~~~~~~~~~~~~l~~~g~~v~~~d~~---~~~~~---------~~~~~~~~~~~~~~~~-~~-~~~l~ 70 (192)
T 1uxo_A 5 KQVYIIHGYRASSTNHWFPWLKKRLLADGVQADILNMP---NPLQP---------RLEDWLDTLSLYQHTL-HE-NTYLV 70 (192)
T ss_dssp CEEEEECCTTCCTTSTTHHHHHHHHHHTTCEEEEECCS---CTTSC---------CHHHHHHHHHTTGGGC-CT-TEEEE
T ss_pred CEEEEEcCCCCCcchhHHHHHHHHHHhCCcEEEEecCC---CCCCC---------CHHHHHHHHHHHHHhc-cC-CEEEE
Confidence 56999999999998 8998885 586679999999999 33322 4578999999999887 44 57777
Q ss_pred Eecccch-HHHHHHHHhCcC--ccceeEEEcCCCCCCCCCchhhhhhhcccchhhhhhhHHHHHHHHHhCCCcccccccc
Q 022534 114 VQGFLVG-SYGLTWALKNPS--RISKLAILNSPLTASSPLPGLFQQLRIPLLGEFTAQNAIMAERFIEAGSPYVLKLDKA 190 (295)
Q Consensus 114 ~~G~~~G-~~~~~~a~~~p~--~v~~lil~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (295)
|||+| .+++.+|.++|+ +|+++++++++.......+ .+ ..|.
T Consensus 71 --G~S~Gg~~a~~~a~~~~~~~~v~~~v~~~~~~~~~~~~~------------~~--------~~~~------------- 115 (192)
T 1uxo_A 71 --AHSLGCPAILRFLEHLQLRAALGGIILVSGFAKSLPTLQ------------ML--------DEFT------------- 115 (192)
T ss_dssp --EETTHHHHHHHHHHTCCCSSCEEEEEEETCCSSCCTTCG------------GG--------GGGT-------------
T ss_pred --EeCccHHHHHHHHHHhcccCCccEEEEeccCCCccccch------------hh--------hhhh-------------
Confidence 67766 467888899999 9999999864332110000 00 0000
Q ss_pred ccccccccccCCchhHHHHHHHhcchhhhhHhhhcCcCCCCCCCcEEEEEeCCCCCCCcchHHHHHhcCCCCeEEEEecC
Q 022534 191 DVYRLPYLASSGPGFALLEAARKVNFKDISSRIGAGFSSGSWDKPVLVAWGISDKYLPQSVAEEFQKGNPNVVKLQMIEG 270 (295)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~ 270 (295)
..+. +. ..+. ++++|+++|+|++|.+++++.+..+++.+ + ++++++++
T Consensus 116 ---~~~~-----------------~~-~~~~---------~~~~P~l~i~g~~D~~~~~~~~~~~~~~~-~-~~~~~~~~ 163 (192)
T 1uxo_A 116 ---QGSF-----------------DH-QKII---------ESAKHRAVIASKDDQIVPFSFSKDLAQQI-D-AALYEVQH 163 (192)
T ss_dssp ---CSCC-----------------CH-HHHH---------HHEEEEEEEEETTCSSSCHHHHHHHHHHT-T-CEEEEETT
T ss_pred ---hcCC-----------------CH-HHHH---------hhcCCEEEEecCCCCcCCHHHHHHHHHhc-C-ceEEEeCC
Confidence 0000 00 0111 23689999999999999999999998888 5 79999999
Q ss_pred CCCCCCCCChHH---HHHHHHHHHHh
Q 022534 271 AGHMPQEDWPEK---VVDGLRYFFLN 293 (295)
Q Consensus 271 ~gH~~~~e~p~~---~~~~i~~fl~~ 293 (295)
+||.++.|+|++ +.+.|.+|+.+
T Consensus 164 ~gH~~~~~~~~~~~~~~~~l~~~l~~ 189 (192)
T 1uxo_A 164 GGHFLEDEGFTSLPIVYDVLTSYFSK 189 (192)
T ss_dssp CTTSCGGGTCSCCHHHHHHHHHHHHC
T ss_pred CcCcccccccccHHHHHHHHHHHHHH
Confidence 999999988754 57777887764
|
| >3lcr_A Tautomycetin biosynthetic PKS; alpha-beta hydrolase, thioesterase, polyketide synthase, phosphopantetheine, transferase, hydrolase; 2.00A {Streptomyces SP} | Back alignment and structure |
|---|
Probab=99.88 E-value=1.8e-21 Score=170.06 Aligned_cols=213 Identities=11% Similarity=0.009 Sum_probs=135.8
Q ss_pred CceEEEEcCC--CCCCccchhhHHHhhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCceEE
Q 022534 35 LGTIVFLHGA--PSHSYSYRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEELDKLLDVLEVKYPFFL 112 (295)
Q Consensus 35 ~~~vv~lHG~--~~~~~~w~~~~~~l~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~~l 112 (295)
+|+|||+||+ +++...|..+++.|. .+|+|+++|+||||.|+.+. .+++++++++.++++.+....+++|
T Consensus 81 ~~~lv~lhG~~~~~~~~~~~~~~~~L~-~~~~v~~~d~~G~G~~~~~~-------~~~~~~~~~~~~~l~~~~~~~~~~l 152 (319)
T 3lcr_A 81 GPQLILVCPTVMTTGPQVYSRLAEELD-AGRRVSALVPPGFHGGQALP-------ATLTVLVRSLADVVQAEVADGEFAL 152 (319)
T ss_dssp SCEEEEECCSSTTCSGGGGHHHHHHHC-TTSEEEEEECTTSSTTCCEE-------SSHHHHHHHHHHHHHHHHTTSCEEE
T ss_pred CCeEEEECCCCcCCCHHHHHHHHHHhC-CCceEEEeeCCCCCCCCCCC-------CCHHHHHHHHHHHHHHhcCCCCEEE
Confidence 4799999995 678899999999996 58999999999999877532 2678899999998887743346777
Q ss_pred EEecccch-HHHHHHHHhC---cCccceeEEEcCCCCCCCCCchhhhhhhcccchhhhhhhHHHHHHHHHhCCCcccccc
Q 022534 113 VVQGFLVG-SYGLTWALKN---PSRISKLAILNSPLTASSPLPGLFQQLRIPLLGEFTAQNAIMAERFIEAGSPYVLKLD 188 (295)
Q Consensus 113 v~~G~~~G-~~~~~~a~~~---p~~v~~lil~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (295)
+ |||+| .++..+|.++ |++|+++++++++...... . ....+.. .+. ... ..+...... +.
T Consensus 153 v--GhS~Gg~vA~~~A~~~~~~~~~v~~lvl~~~~~~~~~~-~-~~~~~~~----~~~--~~~-~~~~~~~~~---~~-- 216 (319)
T 3lcr_A 153 A--GHSSGGVVAYEVARELEARGLAPRGVVLIDSYSFDGDG-G-RPEELFR----SAL--NER-FVEYLRLTG---GG-- 216 (319)
T ss_dssp E--EETHHHHHHHHHHHHHHHTTCCCSCEEEESCCCCCSSC-C-HHHHHHH----HHH--HHH-HHHHHHHHC---CC--
T ss_pred E--EECHHHHHHHHHHHHHHhcCCCccEEEEECCCCCCccc-h-hhHHHHH----HHH--HHH-HhhhhcccC---CC--
Confidence 7 77776 4677888776 8899999999764432110 0 1111100 000 000 000000000 00
Q ss_pred ccccccccccccCCchhHHHHHHHhcchhhhhHhhhcCcCCCCCCCcEEEEEeCCCCCCCcchHHHHHhcCCCCeEEEEe
Q 022534 189 KADVYRLPYLASSGPGFALLEAARKVNFKDISSRIGAGFSSGSWDKPVLVAWGISDKYLPQSVAEEFQKGNPNVVKLQMI 268 (295)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~i 268 (295)
.. ......+. ... .....+....+++|+|+|+|++| .+++.....+.+..+...+++++
T Consensus 217 -------------~~-~~~l~~~~-----~~~-~~~~~~~~~~i~~PvLli~g~~~-~~~~~~~~~~~~~~~~~~~~~~~ 275 (319)
T 3lcr_A 217 -------------NL-SQRITAQV-----WCL-ELLRGWRPEGLTAPTLYVRPAQP-LVEQEKPEWRGDVLAAMGQVVEA 275 (319)
T ss_dssp -------------CH-HHHHHHHH-----HHH-HHTTTCCCCCCSSCEEEEEESSC-SSSCCCTHHHHHHHHTCSEEEEE
T ss_pred -------------ch-hHHHHHHH-----HHH-HHHhcCCCCCcCCCEEEEEeCCC-CCCcccchhhhhcCCCCceEEEe
Confidence 00 00000000 000 11122233478999999999985 45556667777766665688888
Q ss_pred cCCCCCCCCC--ChHHHHHHHHHHHHh
Q 022534 269 EGAGHMPQED--WPEKVVDGLRYFFLN 293 (295)
Q Consensus 269 ~~~gH~~~~e--~p~~~~~~i~~fl~~ 293 (295)
++ +|+.+++ +|+++++.|.+||..
T Consensus 276 ~g-~H~~~~~~~~~~~va~~i~~fL~~ 301 (319)
T 3lcr_A 276 PG-DHFTIIEGEHVASTAHIVGDWLRE 301 (319)
T ss_dssp SS-CTTGGGSTTTHHHHHHHHHHHHHH
T ss_pred CC-CcHHhhCcccHHHHHHHHHHHHHh
Confidence 75 8887775 999999999999975
|
| >3fnb_A Acylaminoacyl peptidase SMU_737; alpha-beta-alpha sandwich, helix bundle, structural genomics protein structure initiative; HET: PGE; 2.12A {Streptococcus mutans} | Back alignment and structure |
|---|
Probab=99.87 E-value=1.7e-21 Score=175.72 Aligned_cols=253 Identities=10% Similarity=0.028 Sum_probs=145.2
Q ss_pred eeeEEeCcEEEEEEEcCCCCCCCceEEEEcCCCCCCccchhhHH-HhhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCCHH
Q 022534 13 GSYIKSGEYRWFVRETGSADSRLGTIVFLHGAPSHSYSYRNVMS-QMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTEN 91 (295)
Q Consensus 13 ~~~~~~~~~~~~~~~~g~~~~~~~~vv~lHG~~~~~~~w~~~~~-~l~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~ 91 (295)
-..+.++|..+......+++++.|+||++||++++...|...+. .+.++||+|+++|+||||.|..+.... . .
T Consensus 137 ~~~i~~~~~~l~~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~s~~~~~~~-----~-~ 210 (405)
T 3fnb_A 137 SIEVPFEGELLPGYAIISEDKAQDTLIVVGGGDTSREDLFYMLGYSGWEHDYNVLMVDLPGQGKNPNQGLHF-----E-V 210 (405)
T ss_dssp EEEEEETTEEEEEEEECCSSSCCCEEEEECCSSCCHHHHHHHTHHHHHHTTCEEEEECCTTSTTGGGGTCCC-----C-S
T ss_pred EEEEeECCeEEEEEEEcCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHhCCcEEEEEcCCCCcCCCCCCCCC-----C-c
Confidence 34566677777654444333335899999999999999876663 444569999999999999996533211 1 1
Q ss_pred HHHHHHHHHHHHhCCC-CceEEEEecccch-HHHHHHHHhCcCccceeEEEcCCCCCCCCCchhhhhhhcccchhhhhhh
Q 022534 92 EFHEELDKLLDVLEVK-YPFFLVVQGFLVG-SYGLTWALKNPSRISKLAILNSPLTASSPLPGLFQQLRIPLLGEFTAQN 169 (295)
Q Consensus 92 ~~~~~l~~~~~~l~~~-~~~~lv~~G~~~G-~~~~~~a~~~p~~v~~lil~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (295)
++..|+.++++.+... .+++++ |||+| .+++.+|..+| +|+++|+++ |.... ...... ..+..... .
T Consensus 211 ~~~~d~~~~~~~l~~~~~~v~l~--G~S~GG~~a~~~a~~~p-~v~~~v~~~-p~~~~---~~~~~~-~~~~~~~~--p- 279 (405)
T 3fnb_A 211 DARAAISAILDWYQAPTEKIAIA--GFSGGGYFTAQAVEKDK-RIKAWIAST-PIYDV---AEVFRI-SFSTALKA--P- 279 (405)
T ss_dssp CTHHHHHHHHHHCCCSSSCEEEE--EETTHHHHHHHHHTTCT-TCCEEEEES-CCSCH---HHHHHH-HCC---------
T ss_pred cHHHHHHHHHHHHHhcCCCEEEE--EEChhHHHHHHHHhcCc-CeEEEEEec-CcCCH---HHHHHH-hhhhhhhC--c-
Confidence 4577888888887652 356676 67765 56778888999 899988775 43211 111000 00000000 0
Q ss_pred HHHHHHHHHhCCCccccccccccc-cccccccCCchhHHHHHHHhcchhhhhHhhhcCcCCCCCCCcEEEEEeCCCCCCC
Q 022534 170 AIMAERFIEAGSPYVLKLDKADVY-RLPYLASSGPGFALLEAARKVNFKDISSRIGAGFSSGSWDKPVLVAWGISDKYLP 248 (295)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~~ 248 (295)
......+... .. .......... ..........-...... ... ........++++|+|+|+|++|.+++
T Consensus 280 ~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~-~~~~~~l~~i~~PvLii~G~~D~~v~ 348 (405)
T 3fnb_A 280 KTILKWGSKL-VT-SVNKVAEVNLNKYAWQFGQVDFITSVNE--------VLE-QAQIVDYNKIDVPSLFLVGAGEDSEL 348 (405)
T ss_dssp --------------CCCHHHHHHHHHHHHHHTSSSHHHHHHH--------HHH-HCCCCCGGGCCSCEEEEEETTSCHHH
T ss_pred HHHHHHHHHH-hh-ccchhHHHHHHHhhhhcCCCCHHHHHHH--------HHH-hhcccCHhhCCCCEEEEecCCCcCCC
Confidence 0000000000 00 0000000000 00000000000000000 000 01111123678999999999999988
Q ss_pred cchHHHHHhcCC---CCeEEEEe---cCCCCCCCCCChHHHHHHHHHHHHh
Q 022534 249 QSVAEEFQKGNP---NVVKLQMI---EGAGHMPQEDWPEKVVDGLRYFFLN 293 (295)
Q Consensus 249 ~~~~~~~~~~~~---~~~~~~~i---~~~gH~~~~e~p~~~~~~i~~fl~~ 293 (295)
++.+..+.+.++ ..++++++ +++||..+.++|+.+.+.|.+||..
T Consensus 349 ~~~~~~l~~~l~~~~~~~~l~~~~~~~h~gh~~~~~~~~~~~~~i~~fL~~ 399 (405)
T 3fnb_A 349 MRQSQVLYDNFKQRGIDVTLRKFSSESGADAHCQVNNFRLMHYQVFEWLNH 399 (405)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEEECTTTTCCSGGGGGGHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHhccCCCCceEEEEcCCccchhccccchHHHHHHHHHHHHHH
Confidence 888888877663 24689999 7777888899999999999999976
|
| >1kez_A Erythronolide synthase; polyketide synthase, modular polyketide synthase, thioesterase, 6-DEB, TE, DEBS, alpha, beta-hydrolase; 2.80A {Saccharopolyspora erythraea} SCOP: c.69.1.22 PDB: 1mo2_A | Back alignment and structure |
|---|
Probab=99.87 E-value=4e-21 Score=166.30 Aligned_cols=206 Identities=10% Similarity=0.101 Sum_probs=133.8
Q ss_pred CceEEEEcCCCCCC--ccchhhHHHhhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH-HHHHhCCCCceE
Q 022534 35 LGTIVFLHGAPSHS--YSYRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEELDK-LLDVLEVKYPFF 111 (295)
Q Consensus 35 ~~~vv~lHG~~~~~--~~w~~~~~~l~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~l~~-~~~~l~~~~~~~ 111 (295)
.++|||+||+++++ ..|..+++.|.. +|+|+++|+||||.|+.+ .++++++++++.+ +++.++.+ +++
T Consensus 67 ~~~lvllhG~~~~~~~~~~~~~~~~l~~-~~~v~~~d~~G~G~s~~~-------~~~~~~~a~~~~~~l~~~~~~~-~~~ 137 (300)
T 1kez_A 67 EVTVICCAGTAAISGPHEFTRLAGALRG-IAPVRAVPQPGYEEGEPL-------PSSMAAVAAVQADAVIRTQGDK-PFV 137 (300)
T ss_dssp SSEEEECCCSSTTCSTTTTHHHHHHTSS-SCCBCCCCCTTSSTTCCB-------CSSHHHHHHHHHHHHHHHCSSC-CEE
T ss_pred CCeEEEECCCcccCcHHHHHHHHHhcCC-CceEEEecCCCCCCCCCC-------CCCHHHHHHHHHHHHHHhcCCC-CEE
Confidence 57999999999987 999999999975 699999999999998753 2477899999884 56677665 577
Q ss_pred EEEecccch-HHHHHHHHhCc---CccceeEEEcCCCCCCCCCchhhhhhhcccchhhhhhhHHHHHHHHHhCCCccccc
Q 022534 112 LVVQGFLVG-SYGLTWALKNP---SRISKLAILNSPLTASSPLPGLFQQLRIPLLGEFTAQNAIMAERFIEAGSPYVLKL 187 (295)
Q Consensus 112 lv~~G~~~G-~~~~~~a~~~p---~~v~~lil~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (295)
|+ |||+| .+++.+|.++| ++|+++++++++.... ...... + ....... ....
T Consensus 138 Lv--GhS~GG~vA~~~A~~~p~~g~~v~~lvl~~~~~~~~---~~~~~~--------~-------~~~~~~~----~~~~ 193 (300)
T 1kez_A 138 VA--GHSAGALMAYALATELLDRGHPPRGVVLIDVYPPGH---QDAMNA--------W-------LEELTAT----LFDR 193 (300)
T ss_dssp EE--CCTHHHHHHHHHHHHTTTTTCCCSEEECBTCCCTTT---CHHHHH--------H-------HHHHHGG----GCCC
T ss_pred EE--EECHhHHHHHHHHHHHHhcCCCccEEEEECCCCCcc---hhHHHH--------H-------HHHHHHH----HHhC
Confidence 76 78776 56888888888 5899999886533211 001000 0 0000000 0000
Q ss_pred cccccccccccccCCchhHHHHHHHhcchhhhhHhhhcCcCCCCCCCcEEEEEeCCCCCCCcchHHHHHhcCCCCeEEEE
Q 022534 188 DKADVYRLPYLASSGPGFALLEAARKVNFKDISSRIGAGFSSGSWDKPVLVAWGISDKYLPQSVAEEFQKGNPNVVKLQM 267 (295)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~ 267 (295)
.. .+. .... ...+. .... +...+....+++|+++|+|++| .+++.. ..+.+..+..+++++
T Consensus 194 ~~-----~~~-----~~~~-~~~~~-----~~~~-~~~~~~~~~i~~P~lii~G~d~-~~~~~~-~~~~~~~~~~~~~~~ 254 (300)
T 1kez_A 194 ET-----VRM-----DDTR-LTALG-----AYDR-LTGQWRPRETGLPTLLVSAGEP-MGPWPD-DSWKPTWPFEHDTVA 254 (300)
T ss_dssp CS-----SCC-----CHHH-HHHHH-----HHHH-HTTTCCCCCCSCCBEEEEESSC-SSCCCS-SCCSCCCSSCCEEEE
T ss_pred cC-----Ccc-----chHH-HHHHH-----HHHH-HHhcCCCCCCCCCEEEEEeCCC-CCCCcc-cchhhhcCCCCeEEE
Confidence 00 000 0000 00000 0000 1112223578999999999644 554443 345555664579999
Q ss_pred ecCCCCCCCC-CChHHHHHHHHHHHHh
Q 022534 268 IEGAGHMPQE-DWPEKVVDGLRYFFLN 293 (295)
Q Consensus 268 i~~~gH~~~~-e~p~~~~~~i~~fl~~ 293 (295)
+++ ||++++ |+|+++++.|.+||..
T Consensus 255 i~g-gH~~~~~e~~~~~~~~i~~fl~~ 280 (300)
T 1kez_A 255 VPG-DHFTMVQEHADAIARHIDAWLGG 280 (300)
T ss_dssp ESS-CTTTSSSSCSHHHHHHHHHHHTC
T ss_pred ecC-CChhhccccHHHHHHHHHHHHHh
Confidence 999 999996 8999999999999975
|
| >2jbw_A Dhpon-hydrolase, 2,6-dihydroxy-pseudo-oxynicotine hydrolase; alpha/beta hydrolase, META-cleavage pathway; 2.1A {Arthrobacter nicotinovorans} SCOP: c.69.1.41 | Back alignment and structure |
|---|
Probab=99.87 E-value=1.6e-20 Score=168.08 Aligned_cols=227 Identities=12% Similarity=0.086 Sum_probs=148.5
Q ss_pred eeeEEeCcEEEEEEEcCCCC-CCCceEEEEcCCCCCCccchhhHHHhhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCCHH
Q 022534 13 GSYIKSGEYRWFVRETGSAD-SRLGTIVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTEN 91 (295)
Q Consensus 13 ~~~~~~~~~~~~~~~~g~~~-~~~~~vv~lHG~~~~~~~w~~~~~~l~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~ 91 (295)
-.++.++|.++.+..+.+.. .+.|+||++||++++...|...+..|+++||.|+++|+||||.|.... ...++..
T Consensus 129 ~v~~~~dg~~i~~~l~~p~~~~~~P~vl~~hG~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~G~s~~~~----~~~~~~~ 204 (386)
T 2jbw_A 129 RHELVVDGIPMPVYVRIPEGPGPHPAVIMLGGLESTKEESFQMENLVLDRGMATATFDGPGQGEMFEYK----RIAGDYE 204 (386)
T ss_dssp EEEEEETTEEEEEEEECCSSSCCEEEEEEECCSSCCTTTTHHHHHHHHHTTCEEEEECCTTSGGGTTTC----CSCSCHH
T ss_pred EEEEEeCCEEEEEEEEcCCCCCCCCEEEEeCCCCccHHHHHHHHHHHHhCCCEEEEECCCCCCCCCCCC----CCCccHH
Confidence 34455688888876665432 346889999999988887777788888889999999999999993222 1133556
Q ss_pred HHHHHHHHHHHH---hCCCCceEEEEecccchH-HHHHHHHhCcCccceeEEEcCCCCCCCCCchhhhhhhcccchhhhh
Q 022534 92 EFHEELDKLLDV---LEVKYPFFLVVQGFLVGS-YGLTWALKNPSRISKLAILNSPLTASSPLPGLFQQLRIPLLGEFTA 167 (295)
Q Consensus 92 ~~~~~l~~~~~~---l~~~~~~~lv~~G~~~G~-~~~~~a~~~p~~v~~lil~~~p~~~~~~~~~~~~~~~~~~~~~~~~ 167 (295)
+++.++.+++++ ++.+ ++.++ |+|.|+ +++.+|.. |++|+++|++ ++..... .. . .......
T Consensus 205 ~~~~~~~~~l~~~~~~~~~-~i~l~--G~S~GG~la~~~a~~-~~~~~a~v~~-~~~~~~~-~~---~-----~~~~~~~ 270 (386)
T 2jbw_A 205 KYTSAVVDLLTKLEAIRND-AIGVL--GRSLGGNYALKSAAC-EPRLAACISW-GGFSDLD-YW---D-----LETPLTK 270 (386)
T ss_dssp HHHHHHHHHHHHCTTEEEE-EEEEE--EETHHHHHHHHHHHH-CTTCCEEEEE-SCCSCST-TG---G-----GSCHHHH
T ss_pred HHHHHHHHHHHhCCCcCcc-cEEEE--EEChHHHHHHHHHcC-CcceeEEEEe-ccCChHH-HH---H-----hccHHHH
Confidence 778888888887 4434 35555 677664 56666667 8999999988 5433211 11 0 0000000
Q ss_pred hhHHHHHHHHHhCCCccccccccccccccccccCCchhHHH-HHHHhcchhhhhHhhhcCcCCCCCCCcEEEEEeCCCCC
Q 022534 168 QNAIMAERFIEAGSPYVLKLDKADVYRLPYLASSGPGFALL-EAARKVNFKDISSRIGAGFSSGSWDKPVLVAWGISDKY 246 (295)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~ 246 (295)
.. ..+. .+.. .+ ..+. ......+.... ..++++|+|+++|++|.
T Consensus 271 -~~---~~~~-~g~~-------------------~~-~~~~~~~~~~~~~~~~---------~~~i~~P~Lii~G~~D~- 315 (386)
T 2jbw_A 271 -ES---WKYV-SKVD-------------------TL-EEARLHVHAALETRDV---------LSQIACPTYILHGVHDE- 315 (386)
T ss_dssp -HH---HHHH-TTCS-------------------SH-HHHHHHHHHHTCCTTT---------GGGCCSCEEEEEETTSS-
T ss_pred -HH---HHHH-hCCC-------------------CH-HHHHHHHHHhCChhhh---------hcccCCCEEEEECCCCC-
Confidence 00 0000 0000 00 0111 11111111111 12568999999999999
Q ss_pred CCcchHHHHHhcC-CCCeEEEEecCCCCCCCCCChHHHHHHHHHHHHh
Q 022534 247 LPQSVAEEFQKGN-PNVVKLQMIEGAGHMPQEDWPEKVVDGLRYFFLN 293 (295)
Q Consensus 247 ~~~~~~~~~~~~~-~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 293 (295)
++++.+.++.+.+ +..+++++++++||.. .++++++.+.|.+||..
T Consensus 316 v~~~~~~~l~~~l~~~~~~~~~~~~~gH~~-~~~~~~~~~~i~~fl~~ 362 (386)
T 2jbw_A 316 VPLSFVDTVLELVPAEHLNLVVEKDGDHCC-HNLGIRPRLEMADWLYD 362 (386)
T ss_dssp SCTHHHHHHHHHSCGGGEEEEEETTCCGGG-GGGTTHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHhcCCCcEEEEeCCCCcCC-ccchHHHHHHHHHHHHH
Confidence 8999999998888 6348999999999965 67899999999999976
|
| >2h1i_A Carboxylesterase; structural genomics, PSI-2, protein struct initiative, midwest center for structural genomics, MCSG, H; HET: MSE; 2.80A {Bacillus cereus} SCOP: c.69.1.14 | Back alignment and structure |
|---|
Probab=99.87 E-value=6.7e-22 Score=163.30 Aligned_cols=193 Identities=13% Similarity=0.152 Sum_probs=132.4
Q ss_pred eeEEeCcEEEEEEEcCCCCCCCceEEEEcCCCCCCccchhhHHHhhhCCCeEEEe--CCCCCCCCCCCCCCCCCCCCCHH
Q 022534 14 SYIKSGEYRWFVRETGSADSRLGTIVFLHGAPSHSYSYRNVMSQMSDAGFHCFAP--DWLGFGFSDKPEKGYDDFDFTEN 91 (295)
Q Consensus 14 ~~~~~~~~~~~~~~~g~~~~~~~~vv~lHG~~~~~~~w~~~~~~l~~~~~~via~--Dl~G~G~S~~~~~~~~~~~~~~~ 91 (295)
.+++.+|.+++|...|.. ++.|+||++||++++...|..+++.|++ ||.|+++ |++|+|.|+...... ...++.+
T Consensus 18 ~~~~~~~~~~~~~~~~~~-~~~~~vv~~HG~~~~~~~~~~~~~~l~~-g~~v~~~~~d~~g~g~s~~~~~~~-~~~~~~~ 94 (226)
T 2h1i_A 18 LYFQSNAMMKHVFQKGKD-TSKPVLLLLHGTGGNELDLLPLAEIVDS-EASVLSVRGNVLENGMPRFFRRLA-EGIFDEE 94 (226)
T ss_dssp HHHHHHSSSCEEEECCSC-TTSCEEEEECCTTCCTTTTHHHHHHHHT-TSCEEEECCSEEETTEEESSCEEE-TTEECHH
T ss_pred eeecCCCceeEEecCCCC-CCCcEEEEEecCCCChhHHHHHHHHhcc-CceEEEecCcccCCcchhhccccC-ccCcChh
Confidence 345567788888777753 3468999999999999999999999987 9999999 999999886422110 1123445
Q ss_pred HHHHHHHHHHH-------HhCCC-CceEEEEecccch-HHHHHHHHhCcCccceeEEEcCCCCCCCCCchhhhhhhcccc
Q 022534 92 EFHEELDKLLD-------VLEVK-YPFFLVVQGFLVG-SYGLTWALKNPSRISKLAILNSPLTASSPLPGLFQQLRIPLL 162 (295)
Q Consensus 92 ~~~~~l~~~~~-------~l~~~-~~~~lv~~G~~~G-~~~~~~a~~~p~~v~~lil~~~p~~~~~~~~~~~~~~~~~~~ 162 (295)
++.+++.++++ ..+++ ++++++ |||+| .+++.+|..+|++++++++++++....
T Consensus 95 ~~~~~~~~~~~~l~~~~~~~~~~~~~i~l~--G~S~Gg~~a~~~a~~~~~~~~~~v~~~~~~~~~--------------- 157 (226)
T 2h1i_A 95 DLIFRTKELNEFLDEAAKEYKFDRNNIVAI--GYSNGANIAASLLFHYENALKGAVLHHPMVPRR--------------- 157 (226)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCCTTCEEEE--EETHHHHHHHHHHHHCTTSCSEEEEESCCCSCS---------------
T ss_pred hHHHHHHHHHHHHHHHHhhcCCCcccEEEE--EEChHHHHHHHHHHhChhhhCEEEEeCCCCCcC---------------
Confidence 55544444333 33322 346666 77776 467788889999999999886422100
Q ss_pred hhhhhhhHHHHHHHHHhCCCccccccccccccccccccCCchhHHHHHHHhcchhhhhHhhhcCcCCCCCCCcEEEEEeC
Q 022534 163 GEFTAQNAIMAERFIEAGSPYVLKLDKADVYRLPYLASSGPGFALLEAARKVNFKDISSRIGAGFSSGSWDKPVLVAWGI 242 (295)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~ 242 (295)
+ . . . ....++|+++++|+
T Consensus 158 -------------------~--------~--~---------------------~------------~~~~~~p~l~~~G~ 175 (226)
T 2h1i_A 158 -------------------G--------M--Q---------------------L------------ANLAGKSVFIAAGT 175 (226)
T ss_dssp -------------------S--------C--C---------------------C------------CCCTTCEEEEEEES
T ss_pred -------------------c--------c--c---------------------c------------ccccCCcEEEEeCC
Confidence 0 0 0 0 00236999999999
Q ss_pred CCCCCCcchHHHHHhcCCC---CeEEEEecCCCCCCCCCChHHHHHHHHHHHHh
Q 022534 243 SDKYLPQSVAEEFQKGNPN---VVKLQMIEGAGHMPQEDWPEKVVDGLRYFFLN 293 (295)
Q Consensus 243 ~D~~~~~~~~~~~~~~~~~---~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 293 (295)
+|.+++.+.+..+.+.+++ ..++ +++++||..+.+.+ +.+.+||..
T Consensus 176 ~D~~~~~~~~~~~~~~l~~~~~~~~~-~~~~~gH~~~~~~~----~~~~~~l~~ 224 (226)
T 2h1i_A 176 NDPICSSAESEELKVLLENANANVTM-HWENRGHQLTMGEV----EKAKEWYDK 224 (226)
T ss_dssp SCSSSCHHHHHHHHHHHHTTTCEEEE-EEESSTTSCCHHHH----HHHHHHHHH
T ss_pred CCCcCCHHHHHHHHHHHHhcCCeEEE-EeCCCCCCCCHHHH----HHHHHHHHH
Confidence 9999998888888766642 3566 99999999865544 555555543
|
| >3bdv_A Uncharacterized protein DUF1234; DUF1234 family protein, alpha/beta-hydrolases fold, structur genomics; HET: MSE; 1.66A {Pectobacterium atrosepticum SCRI1043} | Back alignment and structure |
|---|
Probab=99.86 E-value=9.6e-21 Score=152.63 Aligned_cols=165 Identities=14% Similarity=0.132 Sum_probs=124.0
Q ss_pred CceEEEEcCCCCCC-ccchhhHHHhhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCceEEE
Q 022534 35 LGTIVFLHGAPSHS-YSYRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEELDKLLDVLEVKYPFFLV 113 (295)
Q Consensus 35 ~~~vv~lHG~~~~~-~~w~~~~~~l~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~~lv 113 (295)
+|+|||+||++++. ..|...+..+.. .++.+|+||++. ++.+++++++.++++.++ + +++++
T Consensus 17 ~~~vv~~HG~~~~~~~~~~~~~~~~~~---~~~~v~~~~~~~------------~~~~~~~~~~~~~~~~~~-~-~~~l~ 79 (191)
T 3bdv_A 17 QLTMVLVPGLRDSDDEHWQSHWERRFP---HWQRIRQREWYQ------------ADLDRWVLAIRRELSVCT-Q-PVILI 79 (191)
T ss_dssp TCEEEEECCTTCCCTTSHHHHHHHHCT---TSEECCCSCCSS------------CCHHHHHHHHHHHHHTCS-S-CEEEE
T ss_pred CceEEEECCCCCCchhhHHHHHHHhcC---CeEEEeccCCCC------------cCHHHHHHHHHHHHHhcC-C-CeEEE
Confidence 46999999999887 678877765433 346778998741 256889999999999876 4 57776
Q ss_pred Eecccch-HHHHHHHHhCcCccceeEEEcCCCCCCCCCchhhhhhhcccchhhhhhhHHHHHHHHHhCCCcccccccccc
Q 022534 114 VQGFLVG-SYGLTWALKNPSRISKLAILNSPLTASSPLPGLFQQLRIPLLGEFTAQNAIMAERFIEAGSPYVLKLDKADV 192 (295)
Q Consensus 114 ~~G~~~G-~~~~~~a~~~p~~v~~lil~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (295)
|||+| .+++.+|.++|++|+++++++++.... . ..+
T Consensus 80 --G~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~-------~------------------------~~~---------- 116 (191)
T 3bdv_A 80 --GHSFGALAACHVVQQGQEGIAGVMLVAPAEPMR-------F------------------------EID---------- 116 (191)
T ss_dssp --EETHHHHHHHHHHHTTCSSEEEEEEESCCCGGG-------G------------------------TCT----------
T ss_pred --EEChHHHHHHHHHHhcCCCccEEEEECCCcccc-------c------------------------cCc----------
Confidence 67766 467888889999999999986422100 0 000
Q ss_pred ccccccccCCchhHHHHHHHhcchhhhhHhhhcCcCCCCCCCcEEEEEeCCCCCCCcchHHHHHhcCCCCeEEEEecCCC
Q 022534 193 YRLPYLASSGPGFALLEAARKVNFKDISSRIGAGFSSGSWDKPVLVAWGISDKYLPQSVAEEFQKGNPNVVKLQMIEGAG 272 (295)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~g 272 (295)
.. ....++++|+++++|++|++++++.++.+.+.. + +++++++++|
T Consensus 117 ----~~----------------------------~~~~~~~~P~lii~g~~D~~~~~~~~~~~~~~~-~-~~~~~~~~~g 162 (191)
T 3bdv_A 117 ----DR----------------------------IQASPLSVPTLTFASHNDPLMSFTRAQYWAQAW-D-SELVDVGEAG 162 (191)
T ss_dssp ----TT----------------------------SCSSCCSSCEEEEECSSBTTBCHHHHHHHHHHH-T-CEEEECCSCT
T ss_pred ----cc----------------------------cccccCCCCEEEEecCCCCcCCHHHHHHHHHhc-C-CcEEEeCCCC
Confidence 00 001256899999999999999999888888776 4 7999999999
Q ss_pred CCCCC----CChHHHHHHHHHHHHhc
Q 022534 273 HMPQE----DWPEKVVDGLRYFFLNY 294 (295)
Q Consensus 273 H~~~~----e~p~~~~~~i~~fl~~~ 294 (295)
|+++. +.|+.+ +.|.+|+.++
T Consensus 163 H~~~~~~~~~~~~~~-~~i~~fl~~~ 187 (191)
T 3bdv_A 163 HINAEAGFGPWEYGL-KRLAEFSEIL 187 (191)
T ss_dssp TSSGGGTCSSCHHHH-HHHHHHHHTT
T ss_pred cccccccchhHHHHH-HHHHHHHHHh
Confidence 99988 667776 9999999764
|
| >1auo_A Carboxylesterase; hydrolase; 1.80A {Pseudomonas fluorescens} SCOP: c.69.1.14 PDB: 1aur_A* | Back alignment and structure |
|---|
Probab=99.86 E-value=3.4e-21 Score=157.75 Aligned_cols=175 Identities=14% Similarity=0.101 Sum_probs=129.5
Q ss_pred CCceEEEEcCCCCCCccchhhHHHhhh--CCCeEEEeCCC-------------------CCCCCCCCCCCCCCCCCCHHH
Q 022534 34 RLGTIVFLHGAPSHSYSYRNVMSQMSD--AGFHCFAPDWL-------------------GFGFSDKPEKGYDDFDFTENE 92 (295)
Q Consensus 34 ~~~~vv~lHG~~~~~~~w~~~~~~l~~--~~~~via~Dl~-------------------G~G~S~~~~~~~~~~~~~~~~ 92 (295)
++|+||++||++++...|..+++.|++ .||+|+++|+| |+|.|... ..++.++
T Consensus 13 ~~~~vv~~HG~~~~~~~~~~~~~~l~~~~~g~~v~~~d~p~~~~~~~~g~~~~~w~d~~g~g~~~~~------~~~~~~~ 86 (218)
T 1auo_A 13 ADACVIWLHGLGADRYDFMPVAEALQESLLTTRFVLPQAPTRPVTINGGYEMPSWYDIKAMSPARSI------SLEELEV 86 (218)
T ss_dssp CSEEEEEECCTTCCTTTTHHHHHHHHTTCTTEEEEECCCCEEEEGGGTTEEEECSSCEEECSSSCEE------CHHHHHH
T ss_pred CCcEEEEEecCCCChhhHHHHHHHHhhcCCceEEEeCCCCCccccCCCCCcccceecCcCCCccccc------chHHHHH
Confidence 468999999999999999999999986 79999998776 45543321 1235678
Q ss_pred HHHHHHHHHHHh---CCC-CceEEEEecccch-HHHHHHHH-hCcCccceeEEEcCCCCCCCCCchhhhhhhcccchhhh
Q 022534 93 FHEELDKLLDVL---EVK-YPFFLVVQGFLVG-SYGLTWAL-KNPSRISKLAILNSPLTASSPLPGLFQQLRIPLLGEFT 166 (295)
Q Consensus 93 ~~~~l~~~~~~l---~~~-~~~~lv~~G~~~G-~~~~~~a~-~~p~~v~~lil~~~p~~~~~~~~~~~~~~~~~~~~~~~ 166 (295)
+++++.++++.+ +++ ++++++ |||+| .+++.+|. ++|+++++++++++.... . .+
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~~i~l~--G~S~Gg~~a~~~a~~~~~~~~~~~v~~~~~~~~----~------------~~- 147 (218)
T 1auo_A 87 SAKMVTDLIEAQKRTGIDASRIFLA--GFSQGGAVVFHTAFINWQGPLGGVIALSTYAPT----F------------GD- 147 (218)
T ss_dssp HHHHHHHHHHHHHHTTCCGGGEEEE--EETHHHHHHHHHHHTTCCSCCCEEEEESCCCTT----C------------CT-
T ss_pred HHHHHHHHHHHHHHcCCCcccEEEE--EECHHHHHHHHHHHhcCCCCccEEEEECCCCCC----c------------hh-
Confidence 889999999887 543 346666 77766 46788888 999999999988542211 0 00
Q ss_pred hhhHHHHHHHHHhCCCccccccccccccccccccCCchhHHHHHHHhcchhhhhHhhhcCcCCCCCCCcEEEEEeCCCCC
Q 022534 167 AQNAIMAERFIEAGSPYVLKLDKADVYRLPYLASSGPGFALLEAARKVNFKDISSRIGAGFSSGSWDKPVLVAWGISDKY 246 (295)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~ 246 (295)
+ . . + .. . .+++|+++++|++|.+
T Consensus 148 ---------------~--------~--~--~-------------------~~--~---------~~~~P~l~i~G~~D~~ 170 (218)
T 1auo_A 148 ---------------E--------L--E--L-------------------SA--S---------QQRIPALCLHGQYDDV 170 (218)
T ss_dssp ---------------T--------C--C--C-------------------CH--H---------HHTCCEEEEEETTCSS
T ss_pred ---------------h--------h--h--h-------------------hh--c---------ccCCCEEEEEeCCCce
Confidence 0 0 0 0 00 0 2369999999999999
Q ss_pred CCcchHHHHHhcCCC---CeEEEEecCCCCCCCCCChHHHHHHHHHHH
Q 022534 247 LPQSVAEEFQKGNPN---VVKLQMIEGAGHMPQEDWPEKVVDGLRYFF 291 (295)
Q Consensus 247 ~~~~~~~~~~~~~~~---~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl 291 (295)
++++.++.+.+.+++ .+++++++ +||..+.|.++++.+.+.++|
T Consensus 171 ~~~~~~~~~~~~l~~~g~~~~~~~~~-~gH~~~~~~~~~~~~~l~~~l 217 (218)
T 1auo_A 171 VQNAMGRSAFEHLKSRGVTVTWQEYP-MGHEVLPQEIHDIGAWLAARL 217 (218)
T ss_dssp SCHHHHHHHHHHHHTTTCCEEEEEES-CSSSCCHHHHHHHHHHHHHHH
T ss_pred ecHHHHHHHHHHHHhCCCceEEEEec-CCCccCHHHHHHHHHHHHHHh
Confidence 998888888776654 47999999 999998888887777777665
|
| >1fj2_A Protein (acyl protein thioesterase 1); alpha/beta hydrolase, serine hydrolase, SAD, anomalous diffr hydrolase; 1.50A {Homo sapiens} SCOP: c.69.1.14 | Back alignment and structure |
|---|
Probab=99.86 E-value=2.9e-21 Score=159.70 Aligned_cols=176 Identities=19% Similarity=0.249 Sum_probs=123.9
Q ss_pred CCceEEEEcCCCCCCccchhhHHHhhhCCCeEEEe-------------------CCCCCCCCCCCCCCCCCCCCCHHHHH
Q 022534 34 RLGTIVFLHGAPSHSYSYRNVMSQMSDAGFHCFAP-------------------DWLGFGFSDKPEKGYDDFDFTENEFH 94 (295)
Q Consensus 34 ~~~~vv~lHG~~~~~~~w~~~~~~l~~~~~~via~-------------------Dl~G~G~S~~~~~~~~~~~~~~~~~~ 94 (295)
++|+|||+||++++...|..+++.|++.||+|+++ |++|+ .++.+. ..++.++++
T Consensus 22 ~~~~vv~lHG~~~~~~~~~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~w~d~~g~-~~~~~~-----~~~~~~~~~ 95 (232)
T 1fj2_A 22 ATAAVIFLHGLGDTGHGWAEAFAGIRSSHIKYICPHAPVRPVTLNMNVAMPSWFDIIGL-SPDSQE-----DESGIKQAA 95 (232)
T ss_dssp CSEEEEEECCSSSCHHHHHHHHHTTCCTTEEEEECCCCEEEEGGGTTEEEECSSCBCCC-STTCCB-----CHHHHHHHH
T ss_pred CCceEEEEecCCCccchHHHHHHHHhcCCcEEEecCCCccccccccccccccccccccC-Cccccc-----ccHHHHHHH
Confidence 46899999999999999999999998779999998 66666 232221 133567888
Q ss_pred HHHHHHHHHh---CCC-CceEEEEecccch-HHHHHHHHhCcCccceeEEEcCCCCCCCCCchhhhhhhcccchhhhhhh
Q 022534 95 EELDKLLDVL---EVK-YPFFLVVQGFLVG-SYGLTWALKNPSRISKLAILNSPLTASSPLPGLFQQLRIPLLGEFTAQN 169 (295)
Q Consensus 95 ~~l~~~~~~l---~~~-~~~~lv~~G~~~G-~~~~~~a~~~p~~v~~lil~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (295)
+++.++++.+ +++ ++++++ |||+| .+++.+|.++|+++++++++++..... ..
T Consensus 96 ~~~~~~i~~~~~~~~~~~~i~l~--G~S~Gg~~a~~~a~~~~~~v~~~i~~~~~~~~~-------~~------------- 153 (232)
T 1fj2_A 96 ENIKALIDQEVKNGIPSNRIILG--GFSQGGALSLYTALTTQQKLAGVTALSCWLPLR-------AS------------- 153 (232)
T ss_dssp HHHHHHHHHHHHTTCCGGGEEEE--EETHHHHHHHHHHTTCSSCCSEEEEESCCCTTG-------GG-------------
T ss_pred HHHHHHHHHHhcCCCCcCCEEEE--EECHHHHHHHHHHHhCCCceeEEEEeecCCCCC-------cc-------------
Confidence 9999999986 653 356676 77776 467788889999999999885422100 00
Q ss_pred HHHHHHHHHhCCCccccccccccccccccccCCchhHHHHHHHhcchhhhhHhhhcCcCCCCCCCcEEEEEeCCCCCCCc
Q 022534 170 AIMAERFIEAGSPYVLKLDKADVYRLPYLASSGPGFALLEAARKVNFKDISSRIGAGFSSGSWDKPVLVAWGISDKYLPQ 249 (295)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~~~ 249 (295)
.+. . .. ....+++|+++++|++|.+++.
T Consensus 154 -----------~~~-------~-------------------------~~---------~~~~~~~P~l~i~G~~D~~~~~ 181 (232)
T 1fj2_A 154 -----------FPQ-------G-------------------------PI---------GGANRDISILQCHGDCDPLVPL 181 (232)
T ss_dssp -----------SCS-------S-------------------------CC---------CSTTTTCCEEEEEETTCSSSCH
T ss_pred -----------ccc-------c-------------------------cc---------ccccCCCCEEEEecCCCccCCH
Confidence 000 0 00 0114579999999999999998
Q ss_pred chHHHHHhcC------CCCeEEEEecCCCCCCCCCChHHHHHHHHHH
Q 022534 250 SVAEEFQKGN------PNVVKLQMIEGAGHMPQEDWPEKVVDGLRYF 290 (295)
Q Consensus 250 ~~~~~~~~~~------~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~f 290 (295)
+.+..+.+.+ ++ +++++++++||..+.|.++++.+.+.++
T Consensus 182 ~~~~~~~~~l~~~~~~~~-~~~~~~~~~~H~~~~~~~~~i~~~l~~~ 227 (232)
T 1fj2_A 182 MFGSLTVEKLKTLVNPAN-VTFKTYEGMMHSSCQQEMMDVKQFIDKL 227 (232)
T ss_dssp HHHHHHHHHHHHHSCGGG-EEEEEETTCCSSCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCCc-eEEEEeCCCCcccCHHHHHHHHHHHHHh
Confidence 8877766554 33 7999999999998555444444444333
|
| >3vis_A Esterase; alpha/beta-hydrolase fold, polyethylene terephthal hydrolase; HET: PE4; 1.76A {Thermobifida alba} | Back alignment and structure |
|---|
Probab=99.86 E-value=2.2e-20 Score=162.12 Aligned_cols=178 Identities=14% Similarity=0.131 Sum_probs=133.3
Q ss_pred cEEEEEEEcCCCCCCCceEEEEcCCCCCCccchhhHHHhhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH
Q 022534 20 EYRWFVRETGSADSRLGTIVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEELDK 99 (295)
Q Consensus 20 ~~~~~~~~~g~~~~~~~~vv~lHG~~~~~~~w~~~~~~l~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~l~~ 99 (295)
+..+++...++ +.|+|||+||++++...|..+++.|+++||.|+++|+||+|.|.... .++....+..
T Consensus 84 ~~~~~~p~~~~---~~p~vv~~HG~~~~~~~~~~~~~~la~~G~~vv~~d~~g~g~s~~~~---------~~d~~~~~~~ 151 (306)
T 3vis_A 84 GGTIYYPRENN---TYGAIAISPGYTGTQSSIAWLGERIASHGFVVIAIDTNTTLDQPDSR---------ARQLNAALDY 151 (306)
T ss_dssp CEEEEEESSCS---CEEEEEEECCTTCCHHHHHHHHHHHHTTTEEEEEECCSSTTCCHHHH---------HHHHHHHHHH
T ss_pred ceEEEeeCCCC---CCCEEEEeCCCcCCHHHHHHHHHHHHhCCCEEEEecCCCCCCCcchH---------HHHHHHHHHH
Confidence 36676654333 35789999999999999999999999889999999999999886421 1233333333
Q ss_pred HHHH--------hCCCCceEEEEecccch-HHHHHHHHhCcCccceeEEEcCCCCCCCCCchhhhhhhcccchhhhhhhH
Q 022534 100 LLDV--------LEVKYPFFLVVQGFLVG-SYGLTWALKNPSRISKLAILNSPLTASSPLPGLFQQLRIPLLGEFTAQNA 170 (295)
Q Consensus 100 ~~~~--------l~~~~~~~lv~~G~~~G-~~~~~~a~~~p~~v~~lil~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (295)
+.+. ++.+ ++.++ |||+| .+++.+|.++|+ +++++++++ ...
T Consensus 152 l~~~~~~~~~~~~~~~-~v~l~--G~S~GG~~a~~~a~~~p~-v~~~v~~~~-~~~------------------------ 202 (306)
T 3vis_A 152 MLTDASSAVRNRIDAS-RLAVM--GHSMGGGGTLRLASQRPD-LKAAIPLTP-WHL------------------------ 202 (306)
T ss_dssp HHHTSCHHHHTTEEEE-EEEEE--EETHHHHHHHHHHHHCTT-CSEEEEESC-CCS------------------------
T ss_pred HHhhcchhhhccCCcc-cEEEE--EEChhHHHHHHHHhhCCC-eeEEEEecc-ccC------------------------
Confidence 3332 2323 35565 77765 567788889997 888887742 110
Q ss_pred HHHHHHHHhCCCccccccccccccccccccCCchhHHHHHHHhcchhhhhHhhhcCcCCCCCCCcEEEEEeCCCCCCCcc
Q 022534 171 IMAERFIEAGSPYVLKLDKADVYRLPYLASSGPGFALLEAARKVNFKDISSRIGAGFSSGSWDKPVLVAWGISDKYLPQS 250 (295)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~~~~ 250 (295)
. . . ..++++|+++++|++|.+++.+
T Consensus 203 ----------~---------~--------------------------~----------~~~~~~P~lii~G~~D~~~~~~ 227 (306)
T 3vis_A 203 ----------N---------K--------------------------S----------WRDITVPTLIIGAEYDTIASVT 227 (306)
T ss_dssp ----------C---------C--------------------------C----------CTTCCSCEEEEEETTCSSSCTT
T ss_pred ----------c---------c--------------------------c----------cccCCCCEEEEecCCCcccCcc
Confidence 0 0 0 0144799999999999999988
Q ss_pred -hHHHHHhcCCC--CeEEEEecCCCCCCCCCChHHHHHHHHHHHHh
Q 022534 251 -VAEEFQKGNPN--VVKLQMIEGAGHMPQEDWPEKVVDGLRYFFLN 293 (295)
Q Consensus 251 -~~~~~~~~~~~--~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 293 (295)
....+.+.++. .+++++++++||..+.+.++++.+.+.+||..
T Consensus 228 ~~~~~~~~~l~~~~~~~~~~~~g~gH~~~~~~~~~~~~~i~~fl~~ 273 (306)
T 3vis_A 228 LHSKPFYNSIPSPTDKAYLELDGASHFAPNITNKTIGMYSVAWLKR 273 (306)
T ss_dssp TTHHHHHHTCCTTSCEEEEEETTCCTTGGGSCCHHHHHHHHHHHHH
T ss_pred hhHHHHHHHhccCCCceEEEECCCCccchhhchhHHHHHHHHHHHH
Confidence 58888888876 57899999999999999999999999999976
|
| >2pbl_A Putative esterase/lipase/thioesterase; alpha/beta-hydrolases fold, structural genomics, joint cente structural genomics, JCSG; 1.79A {Silicibacter SP} SCOP: c.69.1.2 | Back alignment and structure |
|---|
Probab=99.85 E-value=3.4e-21 Score=162.86 Aligned_cols=189 Identities=14% Similarity=0.096 Sum_probs=132.5
Q ss_pred CCCceEEEEcCC---CCCCccchhhHHHhhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCC--
Q 022534 33 SRLGTIVFLHGA---PSHSYSYRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEELDKLLDVLEVK-- 107 (295)
Q Consensus 33 ~~~~~vv~lHG~---~~~~~~w~~~~~~l~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~-- 107 (295)
+++|+|||+||+ +++...|..+++.|++.||+|+++|+||+|.+ +..++++|+.++++.+...
T Consensus 61 ~~~p~vv~~HGgg~~~~~~~~~~~~~~~l~~~G~~v~~~d~~~~~~~------------~~~~~~~d~~~~~~~l~~~~~ 128 (262)
T 2pbl_A 61 TPVGLFVFVHGGYWMAFDKSSWSHLAVGALSKGWAVAMPSYELCPEV------------RISEITQQISQAVTAAAKEID 128 (262)
T ss_dssp SCSEEEEEECCSTTTSCCGGGCGGGGHHHHHTTEEEEEECCCCTTTS------------CHHHHHHHHHHHHHHHHHHSC
T ss_pred CCCCEEEEEcCcccccCChHHHHHHHHHHHhCCCEEEEeCCCCCCCC------------ChHHHHHHHHHHHHHHHHhcc
Confidence 446899999995 37888999999999888999999999998742 3467788888888876432
Q ss_pred CceEEEEecccchH-HHHHHHHhC------cCccceeEEEcCCCCCCCCCchhhhhhhcccchhhhhhhHHHHHHHHHhC
Q 022534 108 YPFFLVVQGFLVGS-YGLTWALKN------PSRISKLAILNSPLTASSPLPGLFQQLRIPLLGEFTAQNAIMAERFIEAG 180 (295)
Q Consensus 108 ~~~~lv~~G~~~G~-~~~~~a~~~------p~~v~~lil~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (295)
.+++++ |||+|+ +++.+|.++ |++++++++++++... ..... .+. . ....
T Consensus 129 ~~i~l~--G~S~Gg~~a~~~a~~~~~~~~~~~~v~~~vl~~~~~~~----~~~~~--------~~~------~-~~~~-- 185 (262)
T 2pbl_A 129 GPIVLA--GHSAGGHLVARMLDPEVLPEAVGARIRNVVPISPLSDL----RPLLR--------TSM------N-EKFK-- 185 (262)
T ss_dssp SCEEEE--EETHHHHHHHHTTCTTTSCHHHHTTEEEEEEESCCCCC----GGGGG--------STT------H-HHHC--
T ss_pred CCEEEE--EECHHHHHHHHHhccccccccccccceEEEEecCccCc----hHHHh--------hhh------h-hhhC--
Confidence 357776 777764 677777777 8999999998643321 00000 000 0 0000
Q ss_pred CCccccccccccccccccccCCchhHHHHHHHhcchhhhhHhhhcCcCCCCCCCcEEEEEeCCCCCCCcchHHHHHhcCC
Q 022534 181 SPYVLKLDKADVYRLPYLASSGPGFALLEAARKVNFKDISSRIGAGFSSGSWDKPVLVAWGISDKYLPQSVAEEFQKGNP 260 (295)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~~ 260 (295)
... . ...... ... ....+++|+++++|++|.+++.+.+..+.+.++
T Consensus 186 ------~~~----------------~---~~~~~~---~~~------~~~~~~~P~lii~G~~D~~~~~~~~~~~~~~~~ 231 (262)
T 2pbl_A 186 ------MDA----------------D---AAIAES---PVE------MQNRYDAKVTVWVGGAERPAFLDQAIWLVEAWD 231 (262)
T ss_dssp ------CCH----------------H---HHHHTC---GGG------CCCCCSCEEEEEEETTSCHHHHHHHHHHHHHHT
T ss_pred ------CCH----------------H---HHHhcC---ccc------ccCCCCCCEEEEEeCCCCcccHHHHHHHHHHhC
Confidence 000 0 000000 000 112568999999999999988888999988887
Q ss_pred CCeEEEEecCCCCCCCCCChHHHHHHHHHHHH
Q 022534 261 NVVKLQMIEGAGHMPQEDWPEKVVDGLRYFFL 292 (295)
Q Consensus 261 ~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~ 292 (295)
+++++++++||+.++|+|+++...+.+++.
T Consensus 232 --~~~~~~~~~~H~~~~~~~~~~~~~l~~~l~ 261 (262)
T 2pbl_A 232 --ADHVIAFEKHHFNVIEPLADPESDLVAVIT 261 (262)
T ss_dssp --CEEEEETTCCTTTTTGGGGCTTCHHHHHHH
T ss_pred --CeEEEeCCCCcchHHhhcCCCCcHHHHHHh
Confidence 699999999999999999988888888764
|
| >3cn9_A Carboxylesterase; alpha/beta hydrolase fold super-family, hydrolase; HET: 2PE; 2.09A {Pseudomonas aeruginosa} PDB: 3cn7_A* | Back alignment and structure |
|---|
Probab=99.85 E-value=4.4e-21 Score=158.56 Aligned_cols=172 Identities=16% Similarity=0.167 Sum_probs=126.2
Q ss_pred CCceEEEEcCCCCCCccchhhHHHhhh--CCCeEEEeCCC-------------------CCCCCCCCCCCCCCCCCCHHH
Q 022534 34 RLGTIVFLHGAPSHSYSYRNVMSQMSD--AGFHCFAPDWL-------------------GFGFSDKPEKGYDDFDFTENE 92 (295)
Q Consensus 34 ~~~~vv~lHG~~~~~~~w~~~~~~l~~--~~~~via~Dl~-------------------G~G~S~~~~~~~~~~~~~~~~ 92 (295)
+.|+||++||++++...|..+++.|++ .||+|+++|+| |+|.|.. ...+++++
T Consensus 23 ~~~~vv~lHG~~~~~~~~~~~~~~l~~~~~g~~v~~~d~p~~~~~~~~g~~~~~w~d~~g~g~~~~------~~~~~~~~ 96 (226)
T 3cn9_A 23 ADACIIWLHGLGADRTDFKPVAEALQMVLPSTRFILPQAPSQAVTVNGGWVMPSWYDILAFSPARA------IDEDQLNA 96 (226)
T ss_dssp CCEEEEEECCTTCCGGGGHHHHHHHHHHCTTEEEEECCCCEEECGGGTSCEEECSSCBCCSSSTTC------BCHHHHHH
T ss_pred CCCEEEEEecCCCChHHHHHHHHHHhhcCCCcEEEeecCCCCccccCCCCcccccccccccccccc------ccchhHHH
Confidence 468999999999999999999999986 79999998777 5554322 11335678
Q ss_pred HHHHHHHHHHHh---CCC-CceEEEEecccch-HHHHHHHH-hCcCccceeEEEcCCCCCCCCCchhhhhhhcccchhhh
Q 022534 93 FHEELDKLLDVL---EVK-YPFFLVVQGFLVG-SYGLTWAL-KNPSRISKLAILNSPLTASSPLPGLFQQLRIPLLGEFT 166 (295)
Q Consensus 93 ~~~~l~~~~~~l---~~~-~~~~lv~~G~~~G-~~~~~~a~-~~p~~v~~lil~~~p~~~~~~~~~~~~~~~~~~~~~~~ 166 (295)
+++++.++++.+ +++ ++++++ |||+| .+++.+|. ++|+++++++++++ ... . . .
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~~i~l~--G~S~Gg~~a~~~a~~~~~~~~~~~v~~~~-~~~------~-~-------~--- 156 (226)
T 3cn9_A 97 SADQVIALIDEQRAKGIAAERIILA--GFSQGGAVVLHTAFRRYAQPLGGVLALST-YAP------T-F-------D--- 156 (226)
T ss_dssp HHHHHHHHHHHHHHTTCCGGGEEEE--EETHHHHHHHHHHHHTCSSCCSEEEEESC-CCG------G-G-------G---
T ss_pred HHHHHHHHHHHHHHcCCCcccEEEE--EECHHHHHHHHHHHhcCccCcceEEEecC-cCC------C-c-------h---
Confidence 889999999987 654 456676 77766 46778888 99999999998853 210 0 0 0
Q ss_pred hhhHHHHHHHHHhCCCccccccccccccccccccCCchhHHHHHHHhcchhhhhHhhhcCcCCCCCCCcEEEEEeCCCCC
Q 022534 167 AQNAIMAERFIEAGSPYVLKLDKADVYRLPYLASSGPGFALLEAARKVNFKDISSRIGAGFSSGSWDKPVLVAWGISDKY 246 (295)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~ 246 (295)
. + .+ . ...+++|+++++|++|.+
T Consensus 157 ------------~-----~--------~~---------------------~-----------~~~~~~P~lii~G~~D~~ 179 (226)
T 3cn9_A 157 ------------D-----L--------AL---------------------D-----------ERHKRIPVLHLHGSQDDV 179 (226)
T ss_dssp ------------G-----C--------CC---------------------C-----------TGGGGCCEEEEEETTCSS
T ss_pred ------------h-----h--------hh---------------------c-----------ccccCCCEEEEecCCCCc
Confidence 0 0 00 0 013469999999999999
Q ss_pred CCcchHHHHHhcCCC---CeEEEEecCCCCCCCCCChHHHHHHHHHHHHh
Q 022534 247 LPQSVAEEFQKGNPN---VVKLQMIEGAGHMPQEDWPEKVVDGLRYFFLN 293 (295)
Q Consensus 247 ~~~~~~~~~~~~~~~---~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 293 (295)
++++.+..+.+.++. .+++++++ +||..+.|.+++ +.+||.+
T Consensus 180 ~~~~~~~~~~~~l~~~g~~~~~~~~~-~gH~~~~~~~~~----i~~~l~~ 224 (226)
T 3cn9_A 180 VDPALGRAAHDALQAQGVEVGWHDYP-MGHEVSLEEIHD----IGAWLRK 224 (226)
T ss_dssp SCHHHHHHHHHHHHHTTCCEEEEEES-CCSSCCHHHHHH----HHHHHHH
T ss_pred cCHHHHHHHHHHHHHcCCceeEEEec-CCCCcchhhHHH----HHHHHHh
Confidence 998888888776653 47999999 999997776654 5555543
|
| >3f67_A Putative dienelactone hydrolase; alpha-beta-alpha sandwich, structural genomics, PSI-2, prote structure initiative; 1.74A {Klebsiella pneumoniae subsp} | Back alignment and structure |
|---|
Probab=99.84 E-value=8.5e-20 Score=151.69 Aligned_cols=206 Identities=15% Similarity=0.183 Sum_probs=138.3
Q ss_pred EEeCcEEEEEEEcCCCC--CCCceEEEEcCCCCCCccchhhHHHhhhCCCeEEEeCCCCCCCCCCCCCCCC------CCC
Q 022534 16 IKSGEYRWFVRETGSAD--SRLGTIVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYD------DFD 87 (295)
Q Consensus 16 ~~~~~~~~~~~~~g~~~--~~~~~vv~lHG~~~~~~~w~~~~~~l~~~~~~via~Dl~G~G~S~~~~~~~~------~~~ 87 (295)
++.+|..+.+....+.+ .+.|+||++||++++...|..+++.|+++||.|+++|++|+|.|........ ...
T Consensus 11 ~~~~~~~~~~~~~~p~~~~~~~p~vv~~HG~~g~~~~~~~~~~~l~~~G~~v~~~d~~g~g~~~~~~~~~~~~~~~~~~~ 90 (241)
T 3f67_A 11 IPSQGENMPAYHARPKNADGPLPIVIVVQEIFGVHEHIRDLCRRLAQEGYLAIAPELYFRQGDPNEYHDIPTLFKELVSK 90 (241)
T ss_dssp EEETTEEEEEEEEEETTCCSCEEEEEEECCTTCSCHHHHHHHHHHHHTTCEEEEECTTTTTCCGGGCCSHHHHHHHTGGG
T ss_pred EecCCcceEEEEecCCCCCCCCCEEEEEcCcCccCHHHHHHHHHHHHCCcEEEEecccccCCCCCchhhHHHHHHHhhhc
Confidence 44477777665554322 2358999999999999999999999988899999999999988765332110 001
Q ss_pred CCHHHHHHHHHHHHHHhCC----CCceEEEEecccch-HHHHHHHHhCcCccceeEEEcCCCCCCCCCchhhhhhhcccc
Q 022534 88 FTENEFHEELDKLLDVLEV----KYPFFLVVQGFLVG-SYGLTWALKNPSRISKLAILNSPLTASSPLPGLFQQLRIPLL 162 (295)
Q Consensus 88 ~~~~~~~~~l~~~~~~l~~----~~~~~lv~~G~~~G-~~~~~~a~~~p~~v~~lil~~~p~~~~~~~~~~~~~~~~~~~ 162 (295)
+..+...+|+.++++.+.- .+++.++ |||+| .+++.++.++|+ +++++++.++..... .
T Consensus 91 ~~~~~~~~d~~~~~~~l~~~~~d~~~i~l~--G~S~Gg~~a~~~a~~~~~-~~~~v~~~~~~~~~~--~----------- 154 (241)
T 3f67_A 91 VPDAQVLADLDHVASWAARHGGDAHRLLIT--GFCWGGRITWLYAAHNPQ-LKAAVAWYGKLVGEK--S----------- 154 (241)
T ss_dssp SCHHHHHHHHHHHHHHHHTTTEEEEEEEEE--EETHHHHHHHHHHTTCTT-CCEEEEESCCCSCCC--C-----------
T ss_pred CCchhhHHHHHHHHHHHHhccCCCCeEEEE--EEcccHHHHHHHHhhCcC-cceEEEEeccccCCC--c-----------
Confidence 2334667888888887642 1235555 77776 467777888887 677776643221100 0
Q ss_pred hhhhhhhHHHHHHHHHhCCCccccccccccccccccccCCchhHHHHHHHhcchhhhhHhhhcCcCCCCCCCcEEEEEeC
Q 022534 163 GEFTAQNAIMAERFIEAGSPYVLKLDKADVYRLPYLASSGPGFALLEAARKVNFKDISSRIGAGFSSGSWDKPVLVAWGI 242 (295)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~ 242 (295)
.... .. .. .. + .++++|+|+++|+
T Consensus 155 ---------------------~~~~-------------~~----~~---------~~---~------~~~~~P~l~~~g~ 178 (241)
T 3f67_A 155 ---------------------LNSP-------------KH----PV---------DI---A------VDLNAPVLGLYGA 178 (241)
T ss_dssp ---------------------SSSC-------------CC----HH---------HH---G------GGCCSCEEEEEET
T ss_pred ---------------------cCCc-------------cC----HH---------Hh---h------hhcCCCEEEEEec
Confidence 0000 00 00 00 0 1457999999999
Q ss_pred CCCCCCcchHHHHHhcC---CCCeEEEEecCCCCCCCCC--------ChHHHHHHHHHHHHh
Q 022534 243 SDKYLPQSVAEEFQKGN---PNVVKLQMIEGAGHMPQED--------WPEKVVDGLRYFFLN 293 (295)
Q Consensus 243 ~D~~~~~~~~~~~~~~~---~~~~~~~~i~~~gH~~~~e--------~p~~~~~~i~~fl~~ 293 (295)
+|.+++++.+..+.+.+ ...++++++++++|....+ ..+++.+.+.+||..
T Consensus 179 ~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~fl~~ 240 (241)
T 3f67_A 179 KDASIPQDTVETMRQALRAANATAEIVVYPEADHAFNADYRASYHEESAKDGWQRMLAWFAQ 240 (241)
T ss_dssp TCTTSCHHHHHHHHHHHHHTTCSEEEEEETTCCTTTTCTTSTTCCHHHHHHHHHHHHHHHTT
T ss_pred CCCCCCHHHHHHHHHHHHHcCCCcEEEEECCCCcceecCCCCCCCHHHHHHHHHHHHHHHhh
Confidence 99999988887776655 1348999999999987643 346788899999875
|
| >1l7a_A Cephalosporin C deacetylase; structural genomics, alpha-beta-alpha sandwich, PSI, protein structure initiative; 1.50A {Bacillus subtilis} SCOP: c.69.1.25 PDB: 1odt_C 1ods_A 3fvt_A 3fvr_A 3fyu_A* 2xlb_A 2xlc_A 3fyt_A* 3fyu_B* | Back alignment and structure |
|---|
Probab=99.84 E-value=4.5e-19 Score=153.16 Aligned_cols=229 Identities=15% Similarity=0.092 Sum_probs=135.1
Q ss_pred CcEEEEEEEcCCC-CCCCceEEEEcCCCCC-CccchhhHHHhhhCCCeEEEeCCCCCCCCCCCCCC-------------C
Q 022534 19 GEYRWFVRETGSA-DSRLGTIVFLHGAPSH-SYSYRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKG-------------Y 83 (295)
Q Consensus 19 ~~~~~~~~~~g~~-~~~~~~vv~lHG~~~~-~~~w~~~~~~l~~~~~~via~Dl~G~G~S~~~~~~-------------~ 83 (295)
+|..+++..+.+. ..+.|+||++||++++ ...|.... .|++.||.|+++|+||||.|..+... .
T Consensus 65 ~g~~i~~~~~~P~~~~~~p~vv~~HG~~~~~~~~~~~~~-~l~~~g~~v~~~d~rg~g~s~~~~~~~~~~~~~~~~~~~~ 143 (318)
T 1l7a_A 65 GNARITGWYAVPDKEGPHPAIVKYHGYNASYDGEIHEMV-NWALHGYATFGMLVRGQQRSEDTSISPHGHALGWMTKGIL 143 (318)
T ss_dssp GGEEEEEEEEEESSCSCEEEEEEECCTTCCSGGGHHHHH-HHHHTTCEEEEECCTTTSSSCCCCCCSSCCSSSSTTTTTT
T ss_pred CCCEEEEEEEeeCCCCCccEEEEEcCCCCCCCCCccccc-chhhCCcEEEEecCCCCCCCCCcccccCCccccceeccCC
Confidence 6767776555432 2345789999999999 88887766 66667999999999999999864210 0
Q ss_pred CCCCCCHHHHHHHHHHHHHHhC----CC-CceEEEEecccch-HHHHHHHHhCcCccceeEEEcCCCCCCCCCchhhhhh
Q 022534 84 DDFDFTENEFHEELDKLLDVLE----VK-YPFFLVVQGFLVG-SYGLTWALKNPSRISKLAILNSPLTASSPLPGLFQQL 157 (295)
Q Consensus 84 ~~~~~~~~~~~~~l~~~~~~l~----~~-~~~~lv~~G~~~G-~~~~~~a~~~p~~v~~lil~~~p~~~~~~~~~~~~~~ 157 (295)
+..+|+......|+.++++.+. ++ +++.++ |||+| .+++.+|..+|+ ++++++. +|.... ... ....
T Consensus 144 ~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~--G~S~GG~~a~~~a~~~~~-~~~~v~~-~p~~~~--~~~-~~~~ 216 (318)
T 1l7a_A 144 DKDTYYYRGVYLDAVRALEVISSFDEVDETRIGVT--GGSQGGGLTIAAAALSDI-PKAAVAD-YPYLSN--FER-AIDV 216 (318)
T ss_dssp CTTTCHHHHHHHHHHHHHHHHHHSTTEEEEEEEEE--EETHHHHHHHHHHHHCSC-CSEEEEE-SCCSCC--HHH-HHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHhCCCcccceeEEE--ecChHHHHHHHHhccCCC-ccEEEec-CCcccC--HHH-HHhc
Confidence 0011223456677777766652 21 345555 77765 567788888886 7777775 443211 000 0000
Q ss_pred hcccchhhhhhhHHHHHHHHHhCCCccccccccccccccccccCCchhHHHHHHHhcchhhhhHhhhcCcCCCCCCCcEE
Q 022534 158 RIPLLGEFTAQNAIMAERFIEAGSPYVLKLDKADVYRLPYLASSGPGFALLEAARKVNFKDISSRIGAGFSSGSWDKPVL 237 (295)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l 237 (295)
. . ...+ .. ...++.... . +. ............+ ....+ .++++|+|
T Consensus 217 ~-~-~~~~---~~--~~~~~~~~~----~---------~~-----~~~~~~~~~~~~~---~~~~~------~~~~~P~l 262 (318)
T 1l7a_A 217 A-L-EQPY---LE--INSFFRRNG----S---------PE-----TEVQAMKTLSYFD---IMNLA------DRVKVPVL 262 (318)
T ss_dssp C-C-STTT---TH--HHHHHHHSC----C---------HH-----HHHHHHHHHHTTC---HHHHG------GGCCSCEE
T ss_pred C-C-cCcc---HH--HHHHHhccC----C---------cc-----cHHHHHHhhcccc---HHHHH------hhCCCCEE
Confidence 0 0 0000 00 001111000 0 00 0001111111111 11111 14579999
Q ss_pred EEEeCCCCCCCcchHHHHHhcCCCCeEEEEecCCCCCCCCCChHHHHHHHHHHHHh
Q 022534 238 VAWGISDKYLPQSVAEEFQKGNPNVVKLQMIEGAGHMPQEDWPEKVVDGLRYFFLN 293 (295)
Q Consensus 238 ~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 293 (295)
+++|++|.+++++.+..+.+.++..+++++++++||.. +.++.+.+.+||..
T Consensus 263 i~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~H~~----~~~~~~~~~~fl~~ 314 (318)
T 1l7a_A 263 MSIGLIDKVTPPSTVFAAYNHLETKKELKVYRYFGHEY----IPAFQTEKLAFFKQ 314 (318)
T ss_dssp EEEETTCSSSCHHHHHHHHHHCCSSEEEEEETTCCSSC----CHHHHHHHHHHHHH
T ss_pred EEeccCCCCCCcccHHHHHhhcCCCeeEEEccCCCCCC----cchhHHHHHHHHHH
Confidence 99999999999988889988887658999999999993 34567777777765
|
| >4fle_A Esterase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, alpha-beta protein, rossmann fold, HY; 2.10A {Yersinia enterocolitica subsp} | Back alignment and structure |
|---|
Probab=99.83 E-value=1.4e-19 Score=147.13 Aligned_cols=184 Identities=11% Similarity=0.066 Sum_probs=114.9
Q ss_pred ceEEEEcCCCCCCccch--hhHHHhhhC--CCeEEEeCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCceE
Q 022534 36 GTIVFLHGAPSHSYSYR--NVMSQMSDA--GFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEELDKLLDVLEVKYPFF 111 (295)
Q Consensus 36 ~~vv~lHG~~~~~~~w~--~~~~~l~~~--~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~~ 111 (295)
|+|||+|||.++..+|. .+.+.+++. +|+|++||+||||+| ..+++..+++....+ +++
T Consensus 3 ptIl~lHGf~ss~~s~k~~~l~~~~~~~~~~~~v~~pdl~~~g~~----------------~~~~l~~~~~~~~~~-~i~ 65 (202)
T 4fle_A 3 STLLYIHGFNSSPSSAKATTFKSWLQQHHPHIEMQIPQLPPYPAE----------------AAEMLESIVMDKAGQ-SIG 65 (202)
T ss_dssp CEEEEECCTTCCTTCHHHHHHHHHHHHHCTTSEEECCCCCSSHHH----------------HHHHHHHHHHHHTTS-CEE
T ss_pred cEEEEeCCCCCCCCccHHHHHHHHHHHcCCCcEEEEeCCCCCHHH----------------HHHHHHHHHHhcCCC-cEE
Confidence 69999999998877764 344555543 599999999999843 345677777777766 466
Q ss_pred EEEecccchH-HHHHHHHhCcCccceeEEEcCCCCCCCCCchhhhhhhcccchhhhhhhHHHHHHHHHhCCCcccccccc
Q 022534 112 LVVQGFLVGS-YGLTWALKNPSRISKLAILNSPLTASSPLPGLFQQLRIPLLGEFTAQNAIMAERFIEAGSPYVLKLDKA 190 (295)
Q Consensus 112 lv~~G~~~G~-~~~~~a~~~p~~v~~lil~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (295)
|+ |+|+|+ +++.+|.++|+.+..++...++. ........ ....... .
T Consensus 66 l~--G~SmGG~~a~~~a~~~~~~~~~~~~~~~~~-------~~~~~~~~-------------------~~~~~~~----~ 113 (202)
T 4fle_A 66 IV--GSSLGGYFATWLSQRFSIPAVVVNPAVRPF-------ELLSDYLG-------------------ENQNPYT----G 113 (202)
T ss_dssp EE--EETHHHHHHHHHHHHTTCCEEEESCCSSHH-------HHGGGGCE-------------------EEECTTT----C
T ss_pred EE--EEChhhHHHHHHHHHhcccchheeeccchH-------HHHHHhhh-------------------hhccccc----c
Confidence 66 777765 67788889998766554321100 00000000 0000000 0
Q ss_pred ccccccccccCCchhHHHHHHHhcchhhhhHhhhcCcCCCCCCCcEEEEEeCCCCCCCcchHHHHHhcCCCCeEEEEecC
Q 022534 191 DVYRLPYLASSGPGFALLEAARKVNFKDISSRIGAGFSSGSWDKPVLVAWGISDKYLPQSVAEEFQKGNPNVVKLQMIEG 270 (295)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~ 270 (295)
. ++.. ......... . ......++++|+|+|+|++|.++|++.+.++. ++ +++.+++|
T Consensus 114 ~----~~~~----~~~~~~~~~-----~------~~~~~~~~~~P~LiihG~~D~~Vp~~~s~~l~---~~-~~l~i~~g 170 (202)
T 4fle_A 114 Q----KYVL----ESRHIYDLK-----A------MQIEKLESPDLLWLLQQTGDEVLDYRQAVAYY---TP-CRQTVESG 170 (202)
T ss_dssp C----EEEE----CHHHHHHHH-----T------TCCSSCSCGGGEEEEEETTCSSSCHHHHHHHT---TT-SEEEEESS
T ss_pred c----cccc----hHHHHHHHH-----h------hhhhhhccCceEEEEEeCCCCCCCHHHHHHHh---hC-CEEEEECC
Confidence 0 0000 001111100 0 00112367899999999999999998887765 34 79999999
Q ss_pred CCCCCCCCChHHHHHHHHHHHHh
Q 022534 271 AGHMPQEDWPEKVVDGLRYFFLN 293 (295)
Q Consensus 271 ~gH~~~~e~p~~~~~~i~~fl~~ 293 (295)
+||.. +.++++.+.|.+||+-
T Consensus 171 ~~H~~--~~~~~~~~~I~~FL~~ 191 (202)
T 4fle_A 171 GNHAF--VGFDHYFSPIVTFLGL 191 (202)
T ss_dssp CCTTC--TTGGGGHHHHHHHHTC
T ss_pred CCcCC--CCHHHHHHHHHHHHhh
Confidence 99963 6778888999999963
|
| >2hdw_A Hypothetical protein PA2218; alpha/beta hydrolase fold, structural genomics, PSI, structure initiative; 2.00A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=99.83 E-value=1.4e-19 Score=160.03 Aligned_cols=254 Identities=14% Similarity=0.091 Sum_probs=139.7
Q ss_pred CcEEEEEEEcCCC---CCCCceEEEEcCCCCCCccchh-hHHHhhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCCHHHHH
Q 022534 19 GEYRWFVRETGSA---DSRLGTIVFLHGAPSHSYSYRN-VMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFH 94 (295)
Q Consensus 19 ~~~~~~~~~~g~~---~~~~~~vv~lHG~~~~~~~w~~-~~~~l~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~ 94 (295)
+|..+++..+.+. ..+.|+||++||++++...|.. +++.|+++||.|+++|+||||.|+.....+ .......
T Consensus 77 ~g~~~~~~~~~p~~~~~~~~p~vv~~hG~~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~g~s~~~~~~~----~~~~~~~ 152 (367)
T 2hdw_A 77 YGITLAADLYLPKNRGGDRLPAIVIGGPFGAVKEQSSGLYAQTMAERGFVTLAFDPSYTGESGGQPRNV----ASPDINT 152 (367)
T ss_dssp TSCEEEEEEEEESSCCSSCEEEEEEECCTTCCTTSHHHHHHHHHHHTTCEEEEECCTTSTTSCCSSSSC----CCHHHHH
T ss_pred CCCEEEEEEEeCCCCCCCCCCEEEEECCCCCcchhhHHHHHHHHHHCCCEEEEECCCCcCCCCCcCccc----cchhhHH
Confidence 4666666544221 2345789999999999999975 788898889999999999999998643221 1245666
Q ss_pred HHHHHHHHHhC----C-CCceEEEEecccch-HHHHHHHHhCcCccceeEEEcCCCCCCC----CCchhh-hhhhcccch
Q 022534 95 EELDKLLDVLE----V-KYPFFLVVQGFLVG-SYGLTWALKNPSRISKLAILNSPLTASS----PLPGLF-QQLRIPLLG 163 (295)
Q Consensus 95 ~~l~~~~~~l~----~-~~~~~lv~~G~~~G-~~~~~~a~~~p~~v~~lil~~~p~~~~~----~~~~~~-~~~~~~~~~ 163 (295)
.|+.++++.+. + .++++++ |||+| .+++.+|.++| +|+++++++ |..... ...... .........
T Consensus 153 ~d~~~~~~~l~~~~~~~~~~~~l~--G~S~Gg~~a~~~a~~~p-~~~~~v~~~-p~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (367)
T 2hdw_A 153 EDFSAAVDFISLLPEVNRERIGVI--GICGWGGMALNAVAVDK-RVKAVVTST-MYDMTRVMSKGYNDSVTLEQRTRTLE 228 (367)
T ss_dssp HHHHHHHHHHHHCTTEEEEEEEEE--EETHHHHHHHHHHHHCT-TCCEEEEES-CCCHHHHHHHTTTTCCCHHHHHHHHH
T ss_pred HHHHHHHHHHHhCcCCCcCcEEEE--EECHHHHHHHHHHhcCC-CccEEEEec-cccccHHHhhhhccccchHHHHHHHH
Confidence 77777777652 1 1245565 77765 56778888898 699999885 542100 000000 000000000
Q ss_pred hhhhhhHHHHHHHHHhCCCcc--cc---cccccccc--cccccc---CCch---------hHHHHHHHhcchhhhhHhhh
Q 022534 164 EFTAQNAIMAERFIEAGSPYV--LK---LDKADVYR--LPYLAS---SGPG---------FALLEAARKVNFKDISSRIG 224 (295)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~--~~---~~~~~~~~--~~~~~~---~~~~---------~~~~~~~~~~~~~~~~~~~~ 224 (295)
.. . ......+......+. .. ........ ..+... ..+. ..........+.. .
T Consensus 229 ~~-~--~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~--- 299 (367)
T 2hdw_A 229 QL-G--QQRWKDAESGTPAYQPPYNELKGGEAQFLVDYHDYYMTPRGYHPRAVNSGNAWTMTTPLSFMNMPIL---T--- 299 (367)
T ss_dssp HH-H--HHHHHHHHHTSCCBCSCTTCCCSCCCHHHHHHHHHHTSTTTCCTTCSTTTCCCBTTTHHHHTTSCSC---T---
T ss_pred HH-H--HHHHHHhccCCceeecCCCccccccccccCCccceeecccccCcccccccchhhhhhHHHhcCCChh---H---
Confidence 00 0 000001111000000 00 00000000 000000 0000 0000000000000 0
Q ss_pred cCcCCCCCC-CcEEEEEeCCCCCCCcchHHHHHhcCCCCeEEEEecCCCCCCCCCChHH-HHHHHHHHHHhc
Q 022534 225 AGFSSGSWD-KPVLVAWGISDKYLPQSVAEEFQKGNPNVVKLQMIEGAGHMPQEDWPEK-VVDGLRYFFLNY 294 (295)
Q Consensus 225 ~~~~~~~~~-~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~-~~~~i~~fl~~~ 294 (295)
...+++ +|+|+++|++|. +.+.+.++.+.....+++++++++||..+.+.|+. +.+.|.+||...
T Consensus 300 ---~~~~i~~~PvLii~G~~D~--~~~~~~~~~~~~~~~~~~~~~~g~gH~~~~~~~~~~~~~~i~~fl~~~ 366 (367)
T 2hdw_A 300 ---YIKEISPRPILLIHGERAH--SRYFSETAYAAAAEPKELLIVPGASHVDLYDRLDRIPFDRIAGFFDEH 366 (367)
T ss_dssp ---TGGGGTTSCEEEEEETTCT--THHHHHHHHHHSCSSEEEEEETTCCTTHHHHCTTTSCHHHHHHHHHHH
T ss_pred ---hHHhhcCCceEEEecCCCC--CHHHHHHHHHhCCCCeeEEEeCCCCeeeeecCchhHHHHHHHHHHHhh
Confidence 112567 999999999998 77778888775444589999999999988777765 689999999763
|
| >2r8b_A AGR_C_4453P, uncharacterized protein ATU2452; APC6088, agrobacterium tumefaciens STR. C58 structural genomics, PSI-2; 2.56A {Agrobacterium tumefaciens str} SCOP: c.69.1.14 | Back alignment and structure |
|---|
Probab=99.83 E-value=5.3e-20 Score=154.47 Aligned_cols=176 Identities=12% Similarity=0.129 Sum_probs=122.7
Q ss_pred CCceEEEEcCCCCCCccchhhHHHhhhCCCeEEEe--CCCCCCCCCCCCCCCCCCCCCHHHH---HHHHHHHHHHh----
Q 022534 34 RLGTIVFLHGAPSHSYSYRNVMSQMSDAGFHCFAP--DWLGFGFSDKPEKGYDDFDFTENEF---HEELDKLLDVL---- 104 (295)
Q Consensus 34 ~~~~vv~lHG~~~~~~~w~~~~~~l~~~~~~via~--Dl~G~G~S~~~~~~~~~~~~~~~~~---~~~l~~~~~~l---- 104 (295)
+.|+||++||++++...|..+++.|++ +|+|+++ |++|||.|....... ...+...++ ++++.++++.+
T Consensus 61 ~~p~vv~~HG~~~~~~~~~~~~~~l~~-~~~v~~~~~d~~g~g~s~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~ 138 (251)
T 2r8b_A 61 GAPLFVLLHGTGGDENQFFDFGARLLP-QATILSPVGDVSEHGAARFFRRTG-EGVYDMVDLERATGKMADFIKANREHY 138 (251)
T ss_dssp TSCEEEEECCTTCCHHHHHHHHHHHST-TSEEEEECCSEEETTEEESSCBCG-GGCBCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCcEEEEEeCCCCCHhHHHHHHHhcCC-CceEEEecCCcCCCCCcccccCCC-CCcCCHHHHHHHHHHHHHHHHHHHhcc
Confidence 468999999999999999999999986 6999999 899999886421110 001232333 44444444443
Q ss_pred CCCCceEEEEecccch-HHHHHHHHhCcCccceeEEEcCCCCCCCCCchhhhhhhcccchhhhhhhHHHHHHHHHhCCCc
Q 022534 105 EVKYPFFLVVQGFLVG-SYGLTWALKNPSRISKLAILNSPLTASSPLPGLFQQLRIPLLGEFTAQNAIMAERFIEAGSPY 183 (295)
Q Consensus 105 ~~~~~~~lv~~G~~~G-~~~~~~a~~~p~~v~~lil~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (295)
+.++ +.++ |||+| .+++.+|.++|+++++++++++..... .
T Consensus 139 ~~~~-i~l~--G~S~Gg~~a~~~a~~~p~~v~~~v~~~~~~~~~-~---------------------------------- 180 (251)
T 2r8b_A 139 QAGP-VIGL--GFSNGANILANVLIEQPELFDAAVLMHPLIPFE-P---------------------------------- 180 (251)
T ss_dssp TCCS-EEEE--EETHHHHHHHHHHHHSTTTCSEEEEESCCCCSC-C----------------------------------
T ss_pred CCCc-EEEE--EECHHHHHHHHHHHhCCcccCeEEEEecCCCcc-c----------------------------------
Confidence 5554 6666 77766 467888889999999999885422100 0
Q ss_pred cccccccccccccccccCCchhHHHHHHHhcchhhhhHhhhcCcCCCCCCCcEEEEEeCCCCCCCcchHHHHHhcCCC-C
Q 022534 184 VLKLDKADVYRLPYLASSGPGFALLEAARKVNFKDISSRIGAGFSSGSWDKPVLVAWGISDKYLPQSVAEEFQKGNPN-V 262 (295)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~-~ 262 (295)
.+ . ...+++|+|+++|++|.+++++.+..+.+.++. +
T Consensus 181 -----------~~-------------------~------------~~~~~~P~li~~g~~D~~~~~~~~~~~~~~l~~~~ 218 (251)
T 2r8b_A 181 -----------KI-------------------S------------PAKPTRRVLITAGERDPICPVQLTKALEESLKAQG 218 (251)
T ss_dssp -----------CC-------------------C------------CCCTTCEEEEEEETTCTTSCHHHHHHHHHHHHHHS
T ss_pred -----------cc-------------------c------------ccccCCcEEEeccCCCccCCHHHHHHHHHHHHHcC
Confidence 00 0 013479999999999999998888888877762 1
Q ss_pred eEEE-EecCCCCCCCCCChHHHHHHHHHHH
Q 022534 263 VKLQ-MIEGAGHMPQEDWPEKVVDGLRYFF 291 (295)
Q Consensus 263 ~~~~-~i~~~gH~~~~e~p~~~~~~i~~fl 291 (295)
.++. +++++||.++.|.++.+.+.+.+++
T Consensus 219 ~~~~~~~~~~gH~~~~~~~~~~~~~l~~~l 248 (251)
T 2r8b_A 219 GTVETVWHPGGHEIRSGEIDAVRGFLAAYG 248 (251)
T ss_dssp SEEEEEEESSCSSCCHHHHHHHHHHHGGGC
T ss_pred CeEEEEecCCCCccCHHHHHHHHHHHHHhc
Confidence 3554 8889999998887776666555544
|
| >3bjr_A Putative carboxylesterase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 2.09A {Lactobacillus plantarum WCFS1} | Back alignment and structure |
|---|
Probab=99.82 E-value=1.9e-20 Score=160.07 Aligned_cols=196 Identities=9% Similarity=0.079 Sum_probs=122.0
Q ss_pred CCceEEEEcCCC---CCCccchhhHHHhhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCCHHHHHHH---HHHHHHHhCCC
Q 022534 34 RLGTIVFLHGAP---SHSYSYRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEE---LDKLLDVLEVK 107 (295)
Q Consensus 34 ~~~~vv~lHG~~---~~~~~w~~~~~~l~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~---l~~~~~~l~~~ 107 (295)
+.|+||++||++ ++...|..+++.|+++||.|+++|+||+|.|... + .....+.... +.+..+.++++
T Consensus 49 ~~p~vv~lHGgg~~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~~~~~~~---~---~~~~~d~~~~~~~l~~~~~~~~~~ 122 (283)
T 3bjr_A 49 NLPAIIIVPGGSYTHIPVAQAESLAMAFAGHGYQAFYLEYTLLTDQQPL---G---LAPVLDLGRAVNLLRQHAAEWHID 122 (283)
T ss_dssp CEEEEEEECCSTTTCCCHHHHHHHHHHHHTTTCEEEEEECCCTTTCSSC---B---THHHHHHHHHHHHHHHSHHHHTEE
T ss_pred CCcEEEEECCCccccCCccccHHHHHHHHhCCcEEEEEeccCCCccccC---c---hhHHHHHHHHHHHHHHHHHHhCCC
Confidence 468999999944 4556699999999888999999999999988311 0 0012233222 22222333443
Q ss_pred -CceEEEEecccch-HHHHHHHHhCcCc-------------cceeEEEcCCCCCCCCCchhhhhhhcccchhhhhhhHHH
Q 022534 108 -YPFFLVVQGFLVG-SYGLTWALKNPSR-------------ISKLAILNSPLTASSPLPGLFQQLRIPLLGEFTAQNAIM 172 (295)
Q Consensus 108 -~~~~lv~~G~~~G-~~~~~~a~~~p~~-------------v~~lil~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (295)
++++++ |||+| .+++.+|.++|++ +++++++++......... ...
T Consensus 123 ~~~i~l~--G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~p~~~~~~~~~---------------~~~--- 182 (283)
T 3bjr_A 123 PQQITPA--GFSVGGHIVALYNDYWATRVATELNVTPAMLKPNNVVLGYPVISPLLGFP---------------KDD--- 182 (283)
T ss_dssp EEEEEEE--EETHHHHHHHHHHHHTTTHHHHHHTCCHHHHCCSSEEEESCCCCTTSBC----------------------
T ss_pred cccEEEE--EECHHHHHHHHHHhhccccchhhcCCCcCCCCccEEEEcCCccccccccc---------------ccc---
Confidence 246666 77776 5678888899987 888887743222110000 000
Q ss_pred HHHHHHhCCCccccccccccccccccccCCchhHHHHHHHhcchhhhhHhhhcCcCCCCCCCcEEEEEeCCCCCCCcchH
Q 022534 173 AERFIEAGSPYVLKLDKADVYRLPYLASSGPGFALLEAARKVNFKDISSRIGAGFSSGSWDKPVLVAWGISDKYLPQSVA 252 (295)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~~~~~~ 252 (295)
..+ . . .+. . . ...+ .... ..++++|+|+++|++|.+++++.+
T Consensus 183 -~~~-~---~-~~~----~-~------------------~~~~---~~~~------~~~~~~P~lii~G~~D~~~p~~~~ 224 (283)
T 3bjr_A 183 -ATL-A---T-WTP----T-P------------------NELA---ADQH------VNSDNQPTFIWTTADDPIVPATNT 224 (283)
T ss_dssp ---------C-CCC----C-G------------------GGGC---GGGS------CCTTCCCEEEEEESCCTTSCTHHH
T ss_pred -chH-H---H-HHH----H-h------------------HhcC---HHHh------ccCCCCCEEEEEcCCCCCCChHHH
Confidence 000 0 0 000 0 0 0000 0000 125679999999999999998888
Q ss_pred HHHHhcCCC---CeEEEEecCCCCCCCCCCh-------------HHHHHHHHHHHHh
Q 022534 253 EEFQKGNPN---VVKLQMIEGAGHMPQEDWP-------------EKVVDGLRYFFLN 293 (295)
Q Consensus 253 ~~~~~~~~~---~~~~~~i~~~gH~~~~e~p-------------~~~~~~i~~fl~~ 293 (295)
..+++.++. .+++++++++||....+.| +++.+.+.+||.+
T Consensus 225 ~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~i~~fl~~ 281 (283)
T 3bjr_A 225 LAYATALATAKIPYELHVFKHGPHGLALANAQTAWKPDANQPHVAHWLTLALEWLAD 281 (283)
T ss_dssp HHHHHHHHHTTCCEEEEEECCCSHHHHHHHHHHSCC-------CCHHHHHHHHHHHH
T ss_pred HHHHHHHHHCCCCeEEEEeCCCCcccccccccccccccccchhHHHHHHHHHHHHhh
Confidence 777765432 3699999999997766554 7899999999975
|
| >1vkh_A Putative serine hydrolase; structural genomics, joint center structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.85A {Saccharomyces cerevisiae} SCOP: c.69.1.32 | Back alignment and structure |
|---|
Probab=99.82 E-value=9.1e-20 Score=155.16 Aligned_cols=203 Identities=10% Similarity=0.081 Sum_probs=130.2
Q ss_pred CCceEEEEcCCC-----CCCccchhhHHHh----hhCCCeEEEeCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh
Q 022534 34 RLGTIVFLHGAP-----SHSYSYRNVMSQM----SDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEELDKLLDVL 104 (295)
Q Consensus 34 ~~~~vv~lHG~~-----~~~~~w~~~~~~l----~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~l~~~~~~l 104 (295)
+.|+|||+||++ ++...|..+++.| ++.||+|+++|+||.+.+.. ...++++.+.+..+++.+
T Consensus 40 ~~p~vv~lHGgg~~~g~~~~~~~~~~~~~L~~~a~~~g~~vi~~d~r~~~~~~~--------~~~~~d~~~~~~~l~~~~ 111 (273)
T 1vkh_A 40 TREAVIYIHGGAWNDPENTPNDFNQLANTIKSMDTESTVCQYSIEYRLSPEITN--------PRNLYDAVSNITRLVKEK 111 (273)
T ss_dssp CCEEEEEECCSTTTCTTCCGGGGHHHHHHHHHHCTTCCEEEEEECCCCTTTSCT--------THHHHHHHHHHHHHHHHH
T ss_pred CCeEEEEECCCcccCCcCChHHHHHHHHHHhhhhccCCcEEEEeecccCCCCCC--------CcHHHHHHHHHHHHHHhC
Confidence 467999999954 4667899999999 45699999999998775432 124577888888888888
Q ss_pred CCCCceEEEEecccch-HHHHHHHHhC-----------------cCccceeEEEcCCCCCCCCCchhhhhhhcccchhhh
Q 022534 105 EVKYPFFLVVQGFLVG-SYGLTWALKN-----------------PSRISKLAILNSPLTASSPLPGLFQQLRIPLLGEFT 166 (295)
Q Consensus 105 ~~~~~~~lv~~G~~~G-~~~~~~a~~~-----------------p~~v~~lil~~~p~~~~~~~~~~~~~~~~~~~~~~~ 166 (295)
+.++ ++++ |||+| .+++.+|.++ |++|++++++++.... ... .. ..+..
T Consensus 112 ~~~~-i~l~--G~S~GG~~a~~~a~~~~~~~p~~~~~~~~~~~~~~~v~~~v~~~~~~~~----~~~-~~-~~~~~---- 178 (273)
T 1vkh_A 112 GLTN-INMV--GHSVGATFIWQILAALKDPQEKMSEAQLQMLGLLQIVKRVFLLDGIYSL----KEL-LI-EYPEY---- 178 (273)
T ss_dssp TCCC-EEEE--EETHHHHHHHHHHTGGGSCTTTCCHHHHHHHHHHTTEEEEEEESCCCCH----HHH-HH-HCGGG----
T ss_pred CcCc-EEEE--EeCHHHHHHHHHHHHhccCCccccccccccccCCcccceeeeecccccH----HHh-hh-hcccH----
Confidence 7664 6666 77776 4677777775 8899999988543211 000 00 00000
Q ss_pred hhhHHHHHHHHHhCCCccccccccccccccccccCCchhHHHHHHHhcchhhhhHhhhcCcCCCCCCCcEEEEEeCCCCC
Q 022534 167 AQNAIMAERFIEAGSPYVLKLDKADVYRLPYLASSGPGFALLEAARKVNFKDISSRIGAGFSSGSWDKPVLVAWGISDKY 246 (295)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~ 246 (295)
... ....+.. .. .. +. .......... ..... .+++|+|+++|++|.+
T Consensus 179 --~~~-~~~~~~~-~~-------~~-~~-------~~~~~~~~~~-----~~~~~---------~~~~P~lii~G~~D~~ 225 (273)
T 1vkh_A 179 --DCF-TRLAFPD-GI-------QM-YE-------EEPSRVMPYV-----KKALS---------RFSIDMHLVHSYSDEL 225 (273)
T ss_dssp --HHH-HHHHCTT-CG-------GG-CC-------CCHHHHHHHH-----HHHHH---------HHTCEEEEEEETTCSS
T ss_pred --HHH-HHHHhcc-cc-------cc-hh-------hcccccChhh-----hhccc---------ccCCCEEEEecCCcCC
Confidence 000 0111000 00 00 00 0000000000 00111 2479999999999999
Q ss_pred CCcchHHHHHhcCC---CCeEEEEecCCCCCCCCCChHHHHHHHHHHH
Q 022534 247 LPQSVAEEFQKGNP---NVVKLQMIEGAGHMPQEDWPEKVVDGLRYFF 291 (295)
Q Consensus 247 ~~~~~~~~~~~~~~---~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl 291 (295)
++++.+..+.+.++ ..+++++++++||..++|+ +++.+.|.+||
T Consensus 226 vp~~~~~~~~~~l~~~~~~~~~~~~~~~gH~~~~~~-~~~~~~i~~fl 272 (273)
T 1vkh_A 226 LTLRQTNCLISCLQDYQLSFKLYLDDLGLHNDVYKN-GKVAKYIFDNI 272 (273)
T ss_dssp CCTHHHHHHHHHHHHTTCCEEEEEECCCSGGGGGGC-HHHHHHHHHTC
T ss_pred CChHHHHHHHHHHHhcCCceEEEEeCCCcccccccC-hHHHHHHHHHc
Confidence 99888888876553 2379999999999999998 88999999986
|
| >3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A | Back alignment and structure |
|---|
Probab=99.82 E-value=1.7e-19 Score=169.49 Aligned_cols=225 Identities=16% Similarity=0.147 Sum_probs=140.4
Q ss_pred CcEEEEEEEcCCC--CCCCceEEEEcCCCCC--CccchhhHHHhhhCCCeEEEeCCCC---CCCCCCCCCCCCCCCCCHH
Q 022534 19 GEYRWFVRETGSA--DSRLGTIVFLHGAPSH--SYSYRNVMSQMSDAGFHCFAPDWLG---FGFSDKPEKGYDDFDFTEN 91 (295)
Q Consensus 19 ~~~~~~~~~~g~~--~~~~~~vv~lHG~~~~--~~~w~~~~~~l~~~~~~via~Dl~G---~G~S~~~~~~~~~~~~~~~ 91 (295)
+|..+++..+.+. +++.|+||++||++.+ ...|..+++.|+++||.|+++|+|| ||+|..............+
T Consensus 342 ~g~~i~~~~~~p~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~G~s~~~~~~~~~~~~~~~ 421 (582)
T 3o4h_A 342 DGSRVPTYVLESGRAPTPGPTVVLVHGGPFAEDSDSWDTFAASLAAAGFHVVMPNYRGSTGYGEEWRLKIIGDPCGGELE 421 (582)
T ss_dssp TSCEEEEEEEEETTSCSSEEEEEEECSSSSCCCCSSCCHHHHHHHHTTCEEEEECCTTCSSSCHHHHHTTTTCTTTHHHH
T ss_pred CCCEEEEEEEcCCCCCCCCcEEEEECCCcccccccccCHHHHHHHhCCCEEEEeccCCCCCCchhHHhhhhhhcccccHH
Confidence 6777777665443 2246899999998765 7889999999998899999999999 7766322111001111234
Q ss_pred HHHHHHHHHHHHhCCCCceEEEEecccch-HHHHHHHHhCcCccceeEEEcCCCCCCCCCchhhhhhhcccchhhhhhhH
Q 022534 92 EFHEELDKLLDVLEVKYPFFLVVQGFLVG-SYGLTWALKNPSRISKLAILNSPLTASSPLPGLFQQLRIPLLGEFTAQNA 170 (295)
Q Consensus 92 ~~~~~l~~~~~~l~~~~~~~lv~~G~~~G-~~~~~~a~~~p~~v~~lil~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (295)
++.+.+..+++....+ ++.++ |||+| .+++.+|.++|+++++++++++ ... ....... ...
T Consensus 422 d~~~~~~~l~~~~~~d-~i~l~--G~S~GG~~a~~~a~~~p~~~~~~v~~~~-~~~------~~~~~~~--------~~~ 483 (582)
T 3o4h_A 422 DVSAAARWARESGLAS-ELYIM--GYSYGGYMTLCALTMKPGLFKAGVAGAS-VVD------WEEMYEL--------SDA 483 (582)
T ss_dssp HHHHHHHHHHHTTCEE-EEEEE--EETHHHHHHHHHHHHSTTTSSCEEEESC-CCC------HHHHHHT--------CCH
T ss_pred HHHHHHHHHHhCCCcc-eEEEE--EECHHHHHHHHHHhcCCCceEEEEEcCC-ccC------HHHHhhc--------ccc
Confidence 4555555555543344 46665 77766 4677888899999999998853 211 0000000 000
Q ss_pred HHHHHHHHhCCCccccccccccccccccccCCchhHHHHHHHhcchhhhhHhhhcCcCCCCCCCcEEEEEeCCCCCCCcc
Q 022534 171 IMAERFIEAGSPYVLKLDKADVYRLPYLASSGPGFALLEAARKVNFKDISSRIGAGFSSGSWDKPVLVAWGISDKYLPQS 250 (295)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~~~~ 250 (295)
. ...+.... +. .. ... ...... ...+ .++++|+|+++|++|..++++
T Consensus 484 ~-~~~~~~~~----~~-~~---------------~~~---~~~~sp---~~~~------~~i~~P~lii~G~~D~~v~~~ 530 (582)
T 3o4h_A 484 A-FRNFIEQL----TG-GS---------------REI---MRSRSP---INHV------DRIKEPLALIHPQNASRTPLK 530 (582)
T ss_dssp H-HHHHHHHH----TT-TC---------------HHH---HHHTCG---GGGG------GGCCSCEEEEEETTCSSSCHH
T ss_pred h-hHHHHHHH----cC-cC---------------HHH---HHhcCH---HHHH------hcCCCCEEEEecCCCCCcCHH
Confidence 0 00111100 00 00 000 000110 1111 256799999999999999988
Q ss_pred hHHHHHhcCCC---CeEEEEecCCCCCCC-CCChHHHHHHHHHHHHhc
Q 022534 251 VAEEFQKGNPN---VVKLQMIEGAGHMPQ-EDWPEKVVDGLRYFFLNY 294 (295)
Q Consensus 251 ~~~~~~~~~~~---~~~~~~i~~~gH~~~-~e~p~~~~~~i~~fl~~~ 294 (295)
.+.++++.++. .++++++|++||..+ .++++++.+.+.+||..+
T Consensus 531 ~~~~~~~~l~~~g~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~~ 578 (582)
T 3o4h_A 531 PLLRLMGELLARGKTFEAHIIPDAGHAINTMEDAVKILLPAVFFLATQ 578 (582)
T ss_dssp HHHHHHHHHHHTTCCEEEEEETTCCSSCCBHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCCEEEEEECCCCCCCCChHHHHHHHHHHHHHHHHH
Confidence 88887765432 479999999999987 678899999999999863
|
| >3hxk_A Sugar hydrolase; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 3.20A {Lactococcus lactis subsp} | Back alignment and structure |
|---|
Probab=99.82 E-value=1.6e-18 Score=147.44 Aligned_cols=214 Identities=10% Similarity=0.061 Sum_probs=132.5
Q ss_pred eeEEeCcEEEEEEEcCCCC----CCCceEEEEcCCC---CCCccchhhHHHhhhCCCeEEEeCCCCCCCCCCCCCCCCCC
Q 022534 14 SYIKSGEYRWFVRETGSAD----SRLGTIVFLHGAP---SHSYSYRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDF 86 (295)
Q Consensus 14 ~~~~~~~~~~~~~~~g~~~----~~~~~vv~lHG~~---~~~~~w~~~~~~l~~~~~~via~Dl~G~G~S~~~~~~~~~~ 86 (295)
.+...+|..+.+....+.. .+.|+||++||++ ++...|..++..|+++||.|+++|+||+|.|+...
T Consensus 18 ~~~~~~g~~l~~~~~~~~~~~~~~~~p~vv~~HGgg~~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~g~s~~~~------ 91 (276)
T 3hxk_A 18 TFSLNDTAWVDFYQLQNPRQNENYTFPAIIICPGGGYQHISQRESDPLALAFLAQGYQVLLLNYTVMNKGTNYN------ 91 (276)
T ss_dssp ECCCBTTBEEEEECCCC------CCBCEEEEECCSTTTSCCGGGSHHHHHHHHHTTCEEEEEECCCTTSCCCSC------
T ss_pred cccCCCCeEEEEEEeCCcccccCCCCCEEEEEcCCccccCCchhhHHHHHHHHHCCCEEEEecCccCCCcCCCC------
Confidence 4445566666654443322 3468999999943 56677889999998889999999999999987422
Q ss_pred CCCHHHHHHHHHHHHHHh-------CCC-CceEEEEecccchH-HHHHHHHh-CcCccceeEEEcCCCCCCCCCchhhhh
Q 022534 87 DFTENEFHEELDKLLDVL-------EVK-YPFFLVVQGFLVGS-YGLTWALK-NPSRISKLAILNSPLTASSPLPGLFQQ 156 (295)
Q Consensus 87 ~~~~~~~~~~l~~~~~~l-------~~~-~~~~lv~~G~~~G~-~~~~~a~~-~p~~v~~lil~~~p~~~~~~~~~~~~~ 156 (295)
.......|+.++++.+ +++ ++++++ |||+|+ +++.+|.. +++++++++++++..........
T Consensus 92 --~~~~~~~d~~~~~~~l~~~~~~~~~~~~~i~l~--G~S~Gg~~a~~~a~~~~~~~~~~~v~~~p~~~~~~~~~~---- 163 (276)
T 3hxk_A 92 --FLSQNLEEVQAVFSLIHQNHKEWQINPEQVFLL--GCSAGGHLAAWYGNSEQIHRPKGVILCYPVTSFTFGWPS---- 163 (276)
T ss_dssp --THHHHHHHHHHHHHHHHHHTTTTTBCTTCCEEE--EEHHHHHHHHHHSSSCSTTCCSEEEEEEECCBTTSSCSS----
T ss_pred --cCchHHHHHHHHHHHHHHhHHHcCCCcceEEEE--EeCHHHHHHHHHHhhccCCCccEEEEecCcccHHhhCCc----
Confidence 1123334444333322 222 346666 777764 56666666 78899999988543221111000
Q ss_pred hhcccchhhhhhhHHHHHHHHHhCCCccccccccccccccccccCCchhHHHHHHHhcchhhhhHhhhcCcCCCCCCCcE
Q 022534 157 LRIPLLGEFTAQNAIMAERFIEAGSPYVLKLDKADVYRLPYLASSGPGFALLEAARKVNFKDISSRIGAGFSSGSWDKPV 236 (295)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~ 236 (295)
...+ .. .+.. +... .+ .... ..++++|+
T Consensus 164 -----~~~~---------------~~-~~~~---~~~~-------------------~~---~~~~------~~~~~~P~ 191 (276)
T 3hxk_A 164 -----DLSH---------------FN-FEIE---NISE-------------------YN---ISEK------VTSSTPPT 191 (276)
T ss_dssp -----SSSS---------------SC-CCCS---CCGG-------------------GB---TTTT------CCTTSCCE
T ss_pred -----chhh---------------hh-cCch---hhhh-------------------CC---hhhc------cccCCCCE
Confidence 0000 00 0000 0000 00 0000 12557999
Q ss_pred EEEEeCCCCCCCcchHHHHHhcCC---CCeEEEEecCCCCCCCCCCh-------------HHHHHHHHHHHHh
Q 022534 237 LVAWGISDKYLPQSVAEEFQKGNP---NVVKLQMIEGAGHMPQEDWP-------------EKVVDGLRYFFLN 293 (295)
Q Consensus 237 l~i~G~~D~~~~~~~~~~~~~~~~---~~~~~~~i~~~gH~~~~e~p-------------~~~~~~i~~fl~~ 293 (295)
|+++|++|.++|++.+..+.+.+. ..+++++++++||......+ +++.+.+.+||+.
T Consensus 192 lii~G~~D~~vp~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~ 264 (276)
T 3hxk_A 192 FIWHTADDEGVPIYNSLKYCDRLSKHQVPFEAHFFESGPHGVSLANRTTAPSDAYCLPSVHRWVSWASDWLER 264 (276)
T ss_dssp EEEEETTCSSSCTHHHHHHHHHHHTTTCCEEEEEESCCCTTCTTCSTTSCSSSTTCCHHHHTHHHHHHHHHHH
T ss_pred EEEecCCCceeChHHHHHHHHHHHHcCCCeEEEEECCCCCCccccCccccccccccCchHHHHHHHHHHHHHh
Confidence 999999999999888877765542 23699999999998766554 6788888899875
|
| >3og9_A Protein YAHD A copper inducible hydrolase; alpha/beta hydrolase, copper homeostasis, malic acid; 1.88A {Lactococcus lactis subsp} SCOP: c.69.1.0 | Back alignment and structure |
|---|
Probab=99.81 E-value=3.3e-19 Score=145.75 Aligned_cols=170 Identities=12% Similarity=0.153 Sum_probs=115.7
Q ss_pred CCceEEEEcCCCCCCccchhhHHHhhhCCCeEEEeC-------------CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH
Q 022534 34 RLGTIVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPD-------------WLGFGFSDKPEKGYDDFDFTENEFHEELDKL 100 (295)
Q Consensus 34 ~~~~vv~lHG~~~~~~~w~~~~~~l~~~~~~via~D-------------l~G~G~S~~~~~~~~~~~~~~~~~~~~l~~~ 100 (295)
..| ||++||++++...|..+++.|+ .+|+|+++| ++|||++....... ......++++.++
T Consensus 16 ~~p-vv~lHG~g~~~~~~~~~~~~l~-~~~~v~~~~~~~~~~g~~~~~~~~g~g~~~~~~~~~----~~~~~~~~~~~~~ 89 (209)
T 3og9_A 16 LAP-LLLLHSTGGDEHQLVEIAEMIA-PSHPILSIRGRINEQGVNRYFKLRGLGGFTKENFDL----ESLDEETDWLTDE 89 (209)
T ss_dssp SCC-EEEECCTTCCTTTTHHHHHHHS-TTCCEEEECCSBCGGGCCBSSCBCSCTTCSGGGBCH----HHHHHHHHHHHHH
T ss_pred CCC-EEEEeCCCCCHHHHHHHHHhcC-CCceEEEecCCcCCCCcccceecccccccccCCCCH----HHHHHHHHHHHHH
Confidence 456 9999999999999999999998 589999999 88888876432111 1223334444444
Q ss_pred H----HHhCCC-CceEEEEecccch-HHHHHHHHhCcCccceeEEEcCCCCCCCCCchhhhhhhcccchhhhhhhHHHHH
Q 022534 101 L----DVLEVK-YPFFLVVQGFLVG-SYGLTWALKNPSRISKLAILNSPLTASSPLPGLFQQLRIPLLGEFTAQNAIMAE 174 (295)
Q Consensus 101 ~----~~l~~~-~~~~lv~~G~~~G-~~~~~~a~~~p~~v~~lil~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (295)
+ +..+++ ++++++ |||+| .+++.+|.++|+++++++++++ .....
T Consensus 90 ~~~~~~~~~~d~~~~~l~--G~S~Gg~~a~~~a~~~~~~~~~~v~~~~-~~~~~-------------------------- 140 (209)
T 3og9_A 90 VSLLAEKHDLDVHKMIAI--GYSNGANVALNMFLRGKINFDKIIAFHG-MQLED-------------------------- 140 (209)
T ss_dssp HHHHHHHHTCCGGGCEEE--EETHHHHHHHHHHHTTSCCCSEEEEESC-CCCCC--------------------------
T ss_pred HHHHHHhcCCCcceEEEE--EECHHHHHHHHHHHhCCcccceEEEECC-CCCCc--------------------------
Confidence 4 444552 246666 77776 4678888999999999998853 21100
Q ss_pred HHHHhCCCccccccccccccccccccCCchhHHHHHHHhcchhhhhHhhhcCcCCCCCCCcEEEEEeCCCCCCCcchHHH
Q 022534 175 RFIEAGSPYVLKLDKADVYRLPYLASSGPGFALLEAARKVNFKDISSRIGAGFSSGSWDKPVLVAWGISDKYLPQSVAEE 254 (295)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~~~~~~~~ 254 (295)
.. . . ....++|+++++|++|++++++.+++
T Consensus 141 -------~~-------~-----~-------------------------------~~~~~~p~li~~G~~D~~v~~~~~~~ 170 (209)
T 3og9_A 141 -------FE-------Q-----T-------------------------------VQLDDKHVFLSYAPNDMIVPQKNFGD 170 (209)
T ss_dssp -------CC-------C-----C-------------------------------CCCTTCEEEEEECTTCSSSCHHHHHH
T ss_pred -------cc-------c-----c-------------------------------ccccCCCEEEEcCCCCCccCHHHHHH
Confidence 00 0 0 00236999999999999999887777
Q ss_pred HHhcCC---CCeEEEEecCCCCCCCCCChHHHHHHHHHHHHh
Q 022534 255 FQKGNP---NVVKLQMIEGAGHMPQEDWPEKVVDGLRYFFLN 293 (295)
Q Consensus 255 ~~~~~~---~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 293 (295)
+.+.+. ..+++++++ +||.... +..+.+.+||..
T Consensus 171 ~~~~l~~~~~~~~~~~~~-~gH~~~~----~~~~~~~~~l~~ 207 (209)
T 3og9_A 171 LKGDLEDSGCQLEIYESS-LGHQLTQ----EEVLAAKKWLTE 207 (209)
T ss_dssp HHHHHHHTTCEEEEEECS-STTSCCH----HHHHHHHHHHHH
T ss_pred HHHHHHHcCCceEEEEcC-CCCcCCH----HHHHHHHHHHHh
Confidence 655433 236888887 7998743 345667778765
|
| >3mve_A FRSA, UPF0255 protein VV1_0328; FRSA,fermentation/respiration switch protein, hydrolase ACTI lyase; 2.20A {Vibrio vulnificus} PDB: 3our_A | Back alignment and structure |
|---|
Probab=99.81 E-value=2.7e-19 Score=161.85 Aligned_cols=234 Identities=15% Similarity=0.112 Sum_probs=139.9
Q ss_pred eEEeCcEEEEEEEcCCC-CCCCceEEEEcCCCCCCc-cchhhHHHhhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCCHHH
Q 022534 15 YIKSGEYRWFVRETGSA-DSRLGTIVFLHGAPSHSY-SYRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTENE 92 (295)
Q Consensus 15 ~~~~~~~~~~~~~~g~~-~~~~~~vv~lHG~~~~~~-~w~~~~~~l~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~ 92 (295)
.+.++|..+....+.+. +.+.|+||++||++++.. .|..+...|+++||+|+++|+||||.|...... ...+.
T Consensus 172 ~i~~~g~~l~~~~~~P~~~~~~P~vv~~hG~~~~~~~~~~~~~~~l~~~G~~V~~~D~~G~G~s~~~~~~-----~~~~~ 246 (415)
T 3mve_A 172 EIPFEKGKITAHLHLTNTDKPHPVVIVSAGLDSLQTDMWRLFRDHLAKHDIAMLTVDMPSVGYSSKYPLT-----EDYSR 246 (415)
T ss_dssp EEECSSSEEEEEEEESCSSSCEEEEEEECCTTSCGGGGHHHHHHTTGGGTCEEEEECCTTSGGGTTSCCC-----SCTTH
T ss_pred EEEECCEEEEEEEEecCCCCCCCEEEEECCCCccHHHHHHHHHHHHHhCCCEEEEECCCCCCCCCCCCCC-----CCHHH
Confidence 44456666655444332 234689999999998854 555667788777999999999999999864321 12345
Q ss_pred HHHHHHHHHHHhC-C-CCceEEEEecccch-HHHHHHHHhCcCccceeEEEcCCCCCCCCCchhhhhhhcccchhhhhhh
Q 022534 93 FHEELDKLLDVLE-V-KYPFFLVVQGFLVG-SYGLTWALKNPSRISKLAILNSPLTASSPLPGLFQQLRIPLLGEFTAQN 169 (295)
Q Consensus 93 ~~~~l~~~~~~l~-~-~~~~~lv~~G~~~G-~~~~~~a~~~p~~v~~lil~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (295)
+..++.++++.+. + .+++.++ |||+| .+++.+|..+|++|+++|+++++... .+.... ......
T Consensus 247 ~~~~v~~~l~~~~~vd~~~i~l~--G~S~GG~~a~~~a~~~~~~v~~~v~~~~~~~~------~~~~~~--~~~~~~--- 313 (415)
T 3mve_A 247 LHQAVLNELFSIPYVDHHRVGLI--GFRFGGNAMVRLSFLEQEKIKACVILGAPIHD------IFASPQ--KLQQMP--- 313 (415)
T ss_dssp HHHHHHHHGGGCTTEEEEEEEEE--EETHHHHHHHHHHHHTTTTCCEEEEESCCCSH------HHHCHH--HHTTSC---
T ss_pred HHHHHHHHHHhCcCCCCCcEEEE--EECHHHHHHHHHHHhCCcceeEEEEECCcccc------ccccHH--HHHHhH---
Confidence 6677777777654 1 1245565 77765 56778888899999999988654221 110000 000000
Q ss_pred HHHHHHHHHh-CCCccccccccccccccccccCCchhHHHHHHHhcchhhhhHhhhcCcCCCCCCCcEEEEEeCCCCCCC
Q 022534 170 AIMAERFIEA-GSPYVLKLDKADVYRLPYLASSGPGFALLEAARKVNFKDISSRIGAGFSSGSWDKPVLVAWGISDKYLP 248 (295)
Q Consensus 170 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~~ 248 (295)
......+... +... . ....+........... ..+.. ..++++|+|+|+|++|++++
T Consensus 314 ~~~~~~~~~~~g~~~-~-----------------~~~~~~~~~~~~~~~~--~~~~~---~~~i~~PvLii~G~~D~~vp 370 (415)
T 3mve_A 314 KMYLDVLASRLGKSV-V-----------------DIYSLSGQMAAWSLKV--QGFLS---SRKTKVPILAMSLEGDPVSP 370 (415)
T ss_dssp HHHHHHHHHHTTCSS-B-----------------CHHHHHHHGGGGCTTT--TTTTT---SSCBSSCEEEEEETTCSSSC
T ss_pred HHHHHHHHHHhCCCc-c-----------------CHHHHHHHHhhcCccc--ccccc---cCCCCCCEEEEEeCCCCCCC
Confidence 0000000000 0000 0 0001111111000000 00000 13678999999999999999
Q ss_pred cchHHHHHhcCCCCeEEEEecCCCCCCCCCChHHHHHHHHHHHHh
Q 022534 249 QSVAEEFQKGNPNVVKLQMIEGAGHMPQEDWPEKVVDGLRYFFLN 293 (295)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 293 (295)
.+.+..+.+..++ ++++++++..+ .+.++++.+.+.+||..
T Consensus 371 ~~~~~~l~~~~~~-~~l~~i~g~~~---h~~~~~~~~~i~~fL~~ 411 (415)
T 3mve_A 371 YSDNQMVAFFSTY-GKAKKISSKTI---TQGYEQSLDLAIKWLED 411 (415)
T ss_dssp HHHHHHHHHTBTT-CEEEEECCCSH---HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCC-ceEEEecCCCc---ccchHHHHHHHHHHHHH
Confidence 9999999887776 79999998221 23788899999999976
|
| >3d7r_A Esterase; alpha/beta fold, hydrolase; 2.01A {Staphylococcus aureus subsp} | Back alignment and structure |
|---|
Probab=99.81 E-value=1.5e-18 Score=151.88 Aligned_cols=226 Identities=13% Similarity=0.103 Sum_probs=134.8
Q ss_pred EEeCcEEEEEEEcCCCCCCCceEEEEcCCC---CCCccchhhHHHhhh-CCCeEEEeCCCCCCCCCCCCCCCCCCCCCHH
Q 022534 16 IKSGEYRWFVRETGSADSRLGTIVFLHGAP---SHSYSYRNVMSQMSD-AGFHCFAPDWLGFGFSDKPEKGYDDFDFTEN 91 (295)
Q Consensus 16 ~~~~~~~~~~~~~g~~~~~~~~vv~lHG~~---~~~~~w~~~~~~l~~-~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~ 91 (295)
++.+|+.+++..... .+.|+|||+||++ ++...|..++..|+. .||+|+++|+||.+.+. +.+..+
T Consensus 79 ~~~~~~~~~~~~p~~--~~~p~vv~lHGgg~~~~~~~~~~~~~~~la~~~g~~vi~~D~r~~~~~~--------~~~~~~ 148 (326)
T 3d7r_A 79 LSLDDMQVFRFNFRH--QIDKKILYIHGGFNALQPSPFHWRLLDKITLSTLYEVVLPIYPKTPEFH--------IDDTFQ 148 (326)
T ss_dssp EEETTEEEEEEESTT--CCSSEEEEECCSTTTSCCCHHHHHHHHHHHHHHCSEEEEECCCCTTTSC--------HHHHHH
T ss_pred EEECCEEEEEEeeCC--CCCeEEEEECCCcccCCCCHHHHHHHHHHHHHhCCEEEEEeCCCCCCCC--------chHHHH
Confidence 455777776544332 2357999999954 567788888888873 48999999999866432 122457
Q ss_pred HHHHHHHHHHHHhCCCCceEEEEecccch-HHHHHHHHhCcCc----cceeEEEcCCCCCCCCCchhh-hh-hhcccchh
Q 022534 92 EFHEELDKLLDVLEVKYPFFLVVQGFLVG-SYGLTWALKNPSR----ISKLAILNSPLTASSPLPGLF-QQ-LRIPLLGE 164 (295)
Q Consensus 92 ~~~~~l~~~~~~l~~~~~~~lv~~G~~~G-~~~~~~a~~~p~~----v~~lil~~~p~~~~~~~~~~~-~~-~~~~~~~~ 164 (295)
++.+.+..+++.++.++ ++|+ |||+| .+++.+|.++|++ +++++++++........+... .. ...+.+..
T Consensus 149 d~~~~~~~l~~~~~~~~-i~l~--G~S~GG~lAl~~a~~~~~~~~~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~ 225 (326)
T 3d7r_A 149 AIQRVYDQLVSEVGHQN-VVVM--GDGSGGALALSFVQSLLDNQQPLPNKLYLISPILDATLSNKDISDALIEQDAVLSQ 225 (326)
T ss_dssp HHHHHHHHHHHHHCGGG-EEEE--EETHHHHHHHHHHHHHHHTTCCCCSEEEEESCCCCTTCCCTTCCHHHHHHCSSCCH
T ss_pred HHHHHHHHHHhccCCCc-EEEE--EECHHHHHHHHHHHHHHhcCCCCCCeEEEECcccccCcCChhHHhhhcccCcccCH
Confidence 78888888888877665 6666 77765 5788888888877 999998864332211111100 00 00001000
Q ss_pred hhhhhHHHHHHHHHhCCCccccccccccccccccccCCchhHHHHHHHhcchhhhhHhhhcCcCCCCCCCcEEEEEeCCC
Q 022534 165 FTAQNAIMAERFIEAGSPYVLKLDKADVYRLPYLASSGPGFALLEAARKVNFKDISSRIGAGFSSGSWDKPVLVAWGISD 244 (295)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D 244 (295)
. ........+.. ... ... +. ..... ..+ .--+|+|+++|++|
T Consensus 226 ~--~~~~~~~~~~~-~~~------~~~----~~------------------~~~~~----~~~---~~~~P~lii~G~~D 267 (326)
T 3d7r_A 226 F--GVNEIMKKWAN-GLP------LTD----KR------------------ISPIN----GTI---EGLPPVYMFGGGRE 267 (326)
T ss_dssp H--HHHHHHHHHHT-TSC------TTS----TT------------------TSGGG----SCC---TTCCCEEEEEETTS
T ss_pred H--HHHHHHHHhcC-CCC------CCC----Ce------------------ECccc----CCc---ccCCCEEEEEeCcc
Confidence 0 00000111110 000 000 00 00000 000 11269999999999
Q ss_pred CCCCcc--hHHHHHhcCCCCeEEEEecCCCCCCCC---CChHHHHHHHHHHHHh
Q 022534 245 KYLPQS--VAEEFQKGNPNVVKLQMIEGAGHMPQE---DWPEKVVDGLRYFFLN 293 (295)
Q Consensus 245 ~~~~~~--~~~~~~~~~~~~~~~~~i~~~gH~~~~---e~p~~~~~~i~~fl~~ 293 (295)
..++.. ..+.+.+..++ ++++++++++|..+. ++++++++.|.+||..
T Consensus 268 ~~~~~~~~~~~~l~~~~~~-~~~~~~~g~~H~~~~~~~~~~~~~~~~i~~fl~~ 320 (326)
T 3d7r_A 268 MTHPDMKLFEQMMLQHHQY-IEFYDYPKMVHDFPIYPIRQSHKAIKQIAKSIDE 320 (326)
T ss_dssp TTHHHHHHHHHHHHHTTCC-EEEEEETTCCTTGGGSSSHHHHHHHHHHHHHHTS
T ss_pred cchHHHHHHHHHHHHCCCc-EEEEEeCCCcccccccCCHHHHHHHHHHHHHHHH
Confidence 754311 23344444444 799999999999887 8899999999999976
|
| >2c7b_A Carboxylesterase, ESTE1; carboxyesterase, thermophilic enzyme, hydrolase, HSL, alpha/beta hydrolase fold; 2.3A {Uncultured archaeon} | Back alignment and structure |
|---|
Probab=99.81 E-value=1.7e-18 Score=150.10 Aligned_cols=237 Identities=11% Similarity=0.021 Sum_probs=132.8
Q ss_pred eEEeCcEEEEEEEcCCCC-CCCceEEEEcCCC---CCCccchhhHHHhhhC-CCeEEEeCCCCCCCCCCCCCCCCCCCCC
Q 022534 15 YIKSGEYRWFVRETGSAD-SRLGTIVFLHGAP---SHSYSYRNVMSQMSDA-GFHCFAPDWLGFGFSDKPEKGYDDFDFT 89 (295)
Q Consensus 15 ~~~~~~~~~~~~~~g~~~-~~~~~vv~lHG~~---~~~~~w~~~~~~l~~~-~~~via~Dl~G~G~S~~~~~~~~~~~~~ 89 (295)
.+..++..+.+..+.+.. .+.|+||++||++ ++...|..++..|++. ||+|+++|+||+|.|..+.. ...
T Consensus 52 ~i~~~~g~i~~~~~~p~~~~~~p~vv~~HGgg~~~g~~~~~~~~~~~la~~~g~~v~~~d~rg~g~~~~~~~-----~~d 126 (311)
T 2c7b_A 52 HIPVSGGSIRARVYFPKKAAGLPAVLYYHGGGFVFGSIETHDHICRRLSRLSDSVVVSVDYRLAPEYKFPTA-----VED 126 (311)
T ss_dssp EEEETTEEEEEEEEESSSCSSEEEEEEECCSTTTSCCTGGGHHHHHHHHHHHTCEEEEECCCCTTTSCTTHH-----HHH
T ss_pred EecCCCCcEEEEEEecCCCCCCcEEEEECCCcccCCChhhhHHHHHHHHHhcCCEEEEecCCCCCCCCCCcc-----HHH
Confidence 344444456555543322 2357899999998 8889999999999865 89999999999999875421 112
Q ss_pred HHHHHHHHHHHHHHhCCC-CceEEEEecccch-HHHHHHHHhCcC----ccceeEEEcCCCCCCCCCchhhhhhhcccch
Q 022534 90 ENEFHEELDKLLDVLEVK-YPFFLVVQGFLVG-SYGLTWALKNPS----RISKLAILNSPLTASSPLPGLFQQLRIPLLG 163 (295)
Q Consensus 90 ~~~~~~~l~~~~~~l~~~-~~~~lv~~G~~~G-~~~~~~a~~~p~----~v~~lil~~~p~~~~~~~~~~~~~~~~~~~~ 163 (295)
....++++.+.+++++++ ++++++ |+|+| .+++.+|.++|+ ++++++++++................. ...
T Consensus 127 ~~~~~~~l~~~~~~~~~d~~~i~l~--G~S~GG~la~~~a~~~~~~~~~~~~~~vl~~p~~~~~~~~~~~~~~~~~-~~~ 203 (311)
T 2c7b_A 127 AYAALKWVADRADELGVDPDRIAVA--GDSAGGNLAAVVSILDRNSGEKLVKKQVLIYPVVNMTGVPTASLVEFGV-AET 203 (311)
T ss_dssp HHHHHHHHHHTHHHHTEEEEEEEEE--EETHHHHHHHHHHHHHHHTTCCCCSEEEEESCCCCCSSCCCHHHHHHHH-CTT
T ss_pred HHHHHHHHHhhHHHhCCCchhEEEE--ecCccHHHHHHHHHHHHhcCCCCceeEEEECCccCCccccccCCccHHH-hcc
Confidence 234445555555556663 346665 77765 567778877776 489998885433211000000000000 000
Q ss_pred hhhhhhHHHHHHHHHhCCCccccccccccccccccccCCchhHHHHHHHhcchhhhhHhhhcCcCCCCCCCcEEEEEeCC
Q 022534 164 EFTAQNAIMAERFIEAGSPYVLKLDKADVYRLPYLASSGPGFALLEAARKVNFKDISSRIGAGFSSGSWDKPVLVAWGIS 243 (295)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~ 243 (295)
.... .. ....+...... .. ..... ....... .. ...+. |+|+++|++
T Consensus 204 ~~~~-~~-~~~~~~~~~~~---~~--~~~~~-------------------~~~~p~~----~~--l~~~~-P~lii~G~~ 250 (311)
T 2c7b_A 204 TSLP-IE-LMVWFGRQYLK---RP--EEAYD-------------------FKASPLL----AD--LGGLP-PALVVTAEY 250 (311)
T ss_dssp CSSC-HH-HHHHHHHHHCS---ST--TGGGS-------------------TTTCGGG----SC--CTTCC-CEEEEEETT
T ss_pred CCCC-HH-HHHHHHHHhCC---CC--ccccC-------------------cccCccc----cc--ccCCC-cceEEEcCC
Confidence 0000 00 00000000000 00 00000 0000000 00 11233 999999999
Q ss_pred CCCCCcch--HHHHHhcCCCCeEEEEecCCCCCCC-----CCChHHHHHHHHHHHHh
Q 022534 244 DKYLPQSV--AEEFQKGNPNVVKLQMIEGAGHMPQ-----EDWPEKVVDGLRYFFLN 293 (295)
Q Consensus 244 D~~~~~~~--~~~~~~~~~~~~~~~~i~~~gH~~~-----~e~p~~~~~~i~~fl~~ 293 (295)
|++++... ...+.+... .++++++++++|..+ .++++++.+.+.+||..
T Consensus 251 D~~~~~~~~~~~~l~~~g~-~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~i~~fl~~ 306 (311)
T 2c7b_A 251 DPLRDEGELYAYKMKASGS-RAVAVRFAGMVHGFVSFYPFVDAGREALDLAAASIRS 306 (311)
T ss_dssp CTTHHHHHHHHHHHHHTTC-CEEEEEETTCCTTGGGGTTTCHHHHHHHHHHHHHHHH
T ss_pred CCchHHHHHHHHHHHHCCC-CEEEEEeCCCccccccccccCHHHHHHHHHHHHHHHH
Confidence 99886432 244444444 479999999999765 46678999999999976
|
| >3bxp_A Putative lipase/esterase; putative carboxylesterase, structural genomics, joint center structural genomics, JCSG; HET: EPE; 1.70A {Lactobacillus plantarum WCFS1} PDB: 3d3n_A* | Back alignment and structure |
|---|
Probab=99.81 E-value=1.9e-18 Score=147.01 Aligned_cols=197 Identities=11% Similarity=0.074 Sum_probs=117.3
Q ss_pred CCCceEEEEcC---CCCCCccchhhHHHhhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH---hCC
Q 022534 33 SRLGTIVFLHG---APSHSYSYRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEELDKLLDV---LEV 106 (295)
Q Consensus 33 ~~~~~vv~lHG---~~~~~~~w~~~~~~l~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~l~~~~~~---l~~ 106 (295)
.+.|+||++|| .+++...|..+++.|++.||+|+++|+||||.+.. .+ ....++....+..+.+. +++
T Consensus 33 ~~~p~vv~~HGgg~~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~g~~~~---~~---~~~~~d~~~~~~~l~~~~~~~~~ 106 (277)
T 3bxp_A 33 VDYPIMIICPGGGFTYHSGREEAPIATRMMAAGMHTVVLNYQLIVGDQS---VY---PWALQQLGATIDWITTQASAHHV 106 (277)
T ss_dssp CCEEEEEEECCSTTTSCCCTTHHHHHHHHHHTTCEEEEEECCCSTTTCC---CT---THHHHHHHHHHHHHHHHHHHHTE
T ss_pred CCccEEEEECCCccccCCCccchHHHHHHHHCCCEEEEEecccCCCCCc---cC---chHHHHHHHHHHHHHhhhhhcCC
Confidence 34689999999 56777889999999988899999999999994432 11 11233444444433333 233
Q ss_pred C-CceEEEEecccch-HHHHHHHHhC--------------cCccceeEEEcCCCCCCCCCchhhhhhhcccchhhhhhhH
Q 022534 107 K-YPFFLVVQGFLVG-SYGLTWALKN--------------PSRISKLAILNSPLTASSPLPGLFQQLRIPLLGEFTAQNA 170 (295)
Q Consensus 107 ~-~~~~lv~~G~~~G-~~~~~~a~~~--------------p~~v~~lil~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (295)
+ ++++++ |+|+| .+++.+|.++ |.++++++++++......... . ..
T Consensus 107 ~~~~i~l~--G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~v~~~p~~~~~~~~~-----------~-----~~ 168 (277)
T 3bxp_A 107 DCQRIILA--GFSAGGHVVATYNGVATQPELRTRYHLDHYQGQHAAIILGYPVIDLTAGFP-----------T-----TS 168 (277)
T ss_dssp EEEEEEEE--EETHHHHHHHHHHHHTTSHHHHHHTTCTTCCCCCSEEEEESCCCBTTSSSS-----------S-----SH
T ss_pred ChhheEEE--EeCHHHHHHHHHHhhccCcccccccCcccccCCcCEEEEeCCcccCCCCCC-----------C-----cc
Confidence 3 246665 77776 4677777775 778999998854322110000 0 00
Q ss_pred HHHHHHHHhCCCccccccccccccccccccCCchhHHHHHHHhcchhhhhHhhhcCcCCCCCCCcEEEEEeCCCCCCCcc
Q 022534 171 IMAERFIEAGSPYVLKLDKADVYRLPYLASSGPGFALLEAARKVNFKDISSRIGAGFSSGSWDKPVLVAWGISDKYLPQS 250 (295)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~~~~ 250 (295)
.....++. . .. . .+ .... .....+|+|+++|++|.+++++
T Consensus 169 ~~~~~~~~--------~--~~--~-------------------~~---~~~~------~~~~~~P~lii~G~~D~~vp~~ 208 (277)
T 3bxp_A 169 AARNQITT--------D--AR--L-------------------WA---AQRL------VTPASKPAFVWQTATDESVPPI 208 (277)
T ss_dssp HHHHHHCS--------C--GG--G-------------------SB---GGGG------CCTTSCCEEEEECTTCCCSCTH
T ss_pred ccchhccc--------h--hh--h-------------------cC---Hhhc------cccCCCCEEEEeeCCCCccChH
Confidence 00001100 0 00 0 00 0000 1145789999999999999988
Q ss_pred hHHHHHhcCC---CCeEEEEecCCCCCCCCCC---------------hHHHHHHHHHHHHh
Q 022534 251 VAEEFQKGNP---NVVKLQMIEGAGHMPQEDW---------------PEKVVDGLRYFFLN 293 (295)
Q Consensus 251 ~~~~~~~~~~---~~~~~~~i~~~gH~~~~e~---------------p~~~~~~i~~fl~~ 293 (295)
.+..+.+.++ ..++++++++++|....+. ++++.+.+.+||..
T Consensus 209 ~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~ 269 (277)
T 3bxp_A 209 NSLKYVQAMLQHQVATAYHLFGSGIHGLALANHVTQKPGKDKYLNDQAAIWPQLALRWLQE 269 (277)
T ss_dssp HHHHHHHHHHHTTCCEEEEECCCC----------------CHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCeEEEEEeCCCCcccccccccccCccccccccchHHHHHHHHHHHHHh
Confidence 7777765432 2469999999999654443 47888999999875
|
| >3k2i_A Acyl-coenzyme A thioesterase 4; alpha/beta hydrolase fold seven-stranded beta-sandwich, structural genomics, structural genomics consortium, SGC; 2.40A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.80 E-value=4.1e-19 Score=160.99 Aligned_cols=218 Identities=15% Similarity=0.120 Sum_probs=126.0
Q ss_pred CCceEEEEcCCCCCCccchhhHHHhhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCC-CCceEE
Q 022534 34 RLGTIVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEELDKLLDVLEV-KYPFFL 112 (295)
Q Consensus 34 ~~~~vv~lHG~~~~~~~w~~~~~~l~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~-~~~~~l 112 (295)
+.|+||++||++++. |...+..|+++||+|+++|+||+|.|..... .+..+++.+.+..+.+..++ ..++.+
T Consensus 157 ~~P~Vv~~hG~~~~~--~~~~a~~La~~Gy~V~a~D~rG~g~~~~~~~-----~~~~~d~~~~~~~l~~~~~v~~~~i~l 229 (422)
T 3k2i_A 157 PFPGIIDIFGIGGGL--LEYRASLLAGHGFATLALAYYNFEDLPNNMD-----NISLEYFEEAVCYMLQHPQVKGPGIGL 229 (422)
T ss_dssp CBCEEEEECCTTCSC--CCHHHHHHHTTTCEEEEEECSSSTTSCSSCS-----CEETHHHHHHHHHHHTSTTBCCSSEEE
T ss_pred CcCEEEEEcCCCcch--hHHHHHHHHhCCCEEEEEccCCCCCCCCCcc-----cCCHHHHHHHHHHHHhCcCcCCCCEEE
Confidence 457999999998774 4456888988899999999999998875432 22456666666655554443 235666
Q ss_pred EEecccch-HHHHHHHHhCcCccceeEEEcCCCCCCCCCchhhhhhhcccchhhhhhhHHHHHHHHHhCCCccccccccc
Q 022534 113 VVQGFLVG-SYGLTWALKNPSRISKLAILNSPLTASSPLPGLFQQLRIPLLGEFTAQNAIMAERFIEAGSPYVLKLDKAD 191 (295)
Q Consensus 113 v~~G~~~G-~~~~~~a~~~p~~v~~lil~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (295)
+ |||+| .+++.+|.++|+ |+++++++++..... ..........+.+... . . + . ........
T Consensus 230 ~--G~S~GG~lAl~~a~~~p~-v~a~V~~~~~~~~~~-~~~~~~~~~~~~~~~~-~--~----~-----~--~~~~~~~~ 291 (422)
T 3k2i_A 230 L--GISLGADICLSMASFLKN-VSATVSINGSGISGN-TAINYKHSSIPPLGYD-L--R----R-----I--KVAFSGLV 291 (422)
T ss_dssp E--EETHHHHHHHHHHHHCSS-EEEEEEESCCSBCCS-SCEEETTEEECCCCBC-G--G----G-----C--EECTTSCE
T ss_pred E--EECHHHHHHHHHHhhCcC-ccEEEEEcCcccccC-CchhhcCCcCCCcccc-h--h----h-----c--ccCcchhH
Confidence 6 77765 567888889998 999998865442211 1100000000100000 0 0 0 0 00000000
Q ss_pred cccccccccCCchhHHHHHHHhcchhhhhHhhhcCcCCCCCCCcEEEEEeCCCCCCCcchH-HHHHhc----CCCCeEEE
Q 022534 192 VYRLPYLASSGPGFALLEAARKVNFKDISSRIGAGFSSGSWDKPVLVAWGISDKYLPQSVA-EEFQKG----NPNVVKLQ 266 (295)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~~~~~~-~~~~~~----~~~~~~~~ 266 (295)
.+. .... .+.... . ... .....++++|+|+|+|++|.+++.+.. +.+.+. -...++++
T Consensus 292 ~~~-~~~~--~~~~~~-------~-~~~------~~~~~~i~~P~Lii~G~~D~~vp~~~~~~~~~~~l~~~g~~~~~l~ 354 (422)
T 3k2i_A 292 DIV-DIRN--ALVGGY-------K-NPS------MIPIEKAQGPILLIVGQDDHNWRSELYAQTVSERLQAHGKEKPQII 354 (422)
T ss_dssp ECT-TCBC--CCTTGG-------G-STT------BCCGGGCCSCEEEEEETTCSSSCHHHHHHHHHHHHHHTTCCCCEEE
T ss_pred HHH-HHHh--hhhhcc-------c-ccc------cccHHHCCCCEEEEEeCCCCCCCHHHHHHHHHHHHHhcCCCCCEEE
Confidence 000 0000 000000 0 000 001125689999999999999987743 344432 22226999
Q ss_pred EecCCCCCC----------------------------CCCChHHHHHHHHHHHHh
Q 022534 267 MIEGAGHMP----------------------------QEDWPEKVVDGLRYFFLN 293 (295)
Q Consensus 267 ~i~~~gH~~----------------------------~~e~p~~~~~~i~~fl~~ 293 (295)
++|++||.. +.+.++++.+.|.+||..
T Consensus 355 ~~~gagH~~~~p~~p~~~~~~~~~~~~~~~~gg~~~~~~~~~~~~~~~i~~Fl~~ 409 (422)
T 3k2i_A 355 CYPGTGHYIEPPYFPLCPASLHRLLNKHVIWGGEPRAHSKAQEDAWKQILAFFCK 409 (422)
T ss_dssp EETTCCSCCCSTTCCCCCEEEETTTTEEEECCCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred EECCCCCEECCCCCCcchhhhccccCceEeeCCccHHHHHHHHHHHHHHHHHHHH
Confidence 999999987 335678899999999976
|
| >2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A* | Back alignment and structure |
|---|
Probab=99.80 E-value=9.7e-19 Score=167.80 Aligned_cols=223 Identities=13% Similarity=0.129 Sum_probs=139.6
Q ss_pred EeCc-EEEEEEEcCCCC----CCCceEEEEcCCCCCC---ccchh----hHHHhhhCCCeEEEeCCCCCCCCCCCCCCCC
Q 022534 17 KSGE-YRWFVRETGSAD----SRLGTIVFLHGAPSHS---YSYRN----VMSQMSDAGFHCFAPDWLGFGFSDKPEKGYD 84 (295)
Q Consensus 17 ~~~~-~~~~~~~~g~~~----~~~~~vv~lHG~~~~~---~~w~~----~~~~l~~~~~~via~Dl~G~G~S~~~~~~~~ 84 (295)
..+| ..+++..+.+.+ .+.|+||++||++.+. ..|.. +++.|+++||.|+++|+||+|.|..+.....
T Consensus 462 ~~~g~~~~~~~~~~P~~~~~~~~~p~iv~~HGg~~~~~~~~~~~~~~~~~~~~la~~G~~v~~~d~rG~g~s~~~~~~~~ 541 (706)
T 2z3z_A 462 AADGQTPLYYKLTMPLHFDPAKKYPVIVYVYGGPHAQLVTKTWRSSVGGWDIYMAQKGYAVFTVDSRGSANRGAAFEQVI 541 (706)
T ss_dssp CTTSSSEEEEEEECCTTCCTTSCEEEEEECCCCTTCCCCCSCC----CCHHHHHHHTTCEEEEECCTTCSSSCHHHHHTT
T ss_pred cCCCCEEEEEEEEeCCCCCCCCCccEEEEecCCCCceeeccccccCchHHHHHHHhCCcEEEEEecCCCcccchhHHHHH
Confidence 3366 788887775532 2347899999987765 45775 6888988899999999999999875311000
Q ss_pred CCCCCHHHHHHHHHHHHHHhCC-----CCceEEEEecccch-HHHHHHHHhCcCccceeEEEcCCCCCCCCCchhhhhhh
Q 022534 85 DFDFTENEFHEELDKLLDVLEV-----KYPFFLVVQGFLVG-SYGLTWALKNPSRISKLAILNSPLTASSPLPGLFQQLR 158 (295)
Q Consensus 85 ~~~~~~~~~~~~l~~~~~~l~~-----~~~~~lv~~G~~~G-~~~~~~a~~~p~~v~~lil~~~p~~~~~~~~~~~~~~~ 158 (295)
...+. ....+|+.++++.+.- .+++.++ |||+| .+++.+|.++|++++++++++ |.... . .+
T Consensus 542 ~~~~~-~~~~~D~~~~~~~l~~~~~~d~~~i~l~--G~S~GG~~a~~~a~~~p~~~~~~v~~~-~~~~~---~-~~---- 609 (706)
T 2z3z_A 542 HRRLG-QTEMADQMCGVDFLKSQSWVDADRIGVH--GWSYGGFMTTNLMLTHGDVFKVGVAGG-PVIDW---N-RY---- 609 (706)
T ss_dssp TTCTT-HHHHHHHHHHHHHHHTSTTEEEEEEEEE--EETHHHHHHHHHHHHSTTTEEEEEEES-CCCCG---G-GS----
T ss_pred hhccC-CccHHHHHHHHHHHHhCCCCCchheEEE--EEChHHHHHHHHHHhCCCcEEEEEEcC-Cccch---H-HH----
Confidence 00111 1234555555554421 1235555 77766 467788889999999998875 33210 0 00
Q ss_pred cccchhhhhhhHHHHHHHHHhCCCccccccccccccccccccCCchhHHHHHHHhcchhhhhHhhhcCcCCCCCCCcEEE
Q 022534 159 IPLLGEFTAQNAIMAERFIEAGSPYVLKLDKADVYRLPYLASSGPGFALLEAARKVNFKDISSRIGAGFSSGSWDKPVLV 238 (295)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~ 238 (295)
. ....++++. .+.. .+ ..+. ..+. ...+ .++++|+|+
T Consensus 610 ----~------~~~~~~~~~--~~~~-----------------~~--~~~~---~~~~---~~~~------~~i~~P~li 646 (706)
T 2z3z_A 610 ----A------IMYGERYFD--APQE-----------------NP--EGYD---AANL---LKRA------GDLKGRLML 646 (706)
T ss_dssp ----B------HHHHHHHHC--CTTT-----------------CH--HHHH---HHCG---GGGG------GGCCSEEEE
T ss_pred ----H------hhhhhhhcC--Cccc-----------------Ch--hhhh---hCCH---hHhH------HhCCCCEEE
Confidence 0 001112211 1100 00 0000 0111 1111 256799999
Q ss_pred EEeCCCCCCCcchHHHHHhcCCC---CeEEEEecCCCCCCCCCChHHHHHHHHHHHHhc
Q 022534 239 AWGISDKYLPQSVAEEFQKGNPN---VVKLQMIEGAGHMPQEDWPEKVVDGLRYFFLNY 294 (295)
Q Consensus 239 i~G~~D~~~~~~~~~~~~~~~~~---~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~ 294 (295)
++|++|..++++.+.++.+.++. .++++++|++||.++.++|+++.+.|.+||...
T Consensus 647 i~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~ 705 (706)
T 2z3z_A 647 IHGAIDPVVVWQHSLLFLDACVKARTYPDYYVYPSHEHNVMGPDRVHLYETITRYFTDH 705 (706)
T ss_dssp EEETTCSSSCTHHHHHHHHHHHHHTCCCEEEEETTCCSSCCTTHHHHHHHHHHHHHHHH
T ss_pred EeeCCCCCCCHHHHHHHHHHHHHCCCCeEEEEeCCCCCCCCcccHHHHHHHHHHHHHHh
Confidence 99999999999888887765532 369999999999999889999999999999864
|
| >1vlq_A Acetyl xylan esterase; TM0077, structural genomics, JCSG, PR structure initiative, PSI, joint center for structural GENO hydrolase; 2.10A {Thermotoga maritima} SCOP: c.69.1.25 PDB: 3m81_A 3m83_A* 3m82_A* | Back alignment and structure |
|---|
Probab=99.80 E-value=1.2e-18 Score=152.78 Aligned_cols=229 Identities=11% Similarity=0.038 Sum_probs=131.8
Q ss_pred eCcEEEEEEEcCCC--CCCCceEEEEcCCCCCCccchhhHHHhhhCCCeEEEeCCCCCCCCCCCCCCC------------
Q 022534 18 SGEYRWFVRETGSA--DSRLGTIVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGY------------ 83 (295)
Q Consensus 18 ~~~~~~~~~~~g~~--~~~~~~vv~lHG~~~~~~~w~~~~~~l~~~~~~via~Dl~G~G~S~~~~~~~------------ 83 (295)
.+|..+++..+.+. ..+.|+||++||++++...|... ..|+++||.|+++|+||+|.|+......
T Consensus 76 ~dg~~i~~~~~~P~~~~~~~p~vv~~HG~g~~~~~~~~~-~~l~~~G~~v~~~d~rG~g~s~~~~~~~~~p~~~~~~~~~ 154 (337)
T 1vlq_A 76 YRGQRIKGWLLVPKLEEEKLPCVVQYIGYNGGRGFPHDW-LFWPSMGYICFVMDTRGQGSGWLKGDTPDYPEGPVDPQYP 154 (337)
T ss_dssp GGGCEEEEEEEEECCSCSSEEEEEECCCTTCCCCCGGGG-CHHHHTTCEEEEECCTTCCCSSSCCCCCBCCSSSBCCCCS
T ss_pred CCCCEEEEEEEecCCCCCCccEEEEEcCCCCCCCCchhh-cchhhCCCEEEEecCCCCCCcccCCCCcccccccCCCCCC
Confidence 46767766655432 23457899999999887665544 4566679999999999999886431100
Q ss_pred --------CCCCCCHHHHHHHHHHHHHHhC----CC-CceEEEEecccch-HHHHHHHHhCcCccceeEEEcCCCCCCCC
Q 022534 84 --------DDFDFTENEFHEELDKLLDVLE----VK-YPFFLVVQGFLVG-SYGLTWALKNPSRISKLAILNSPLTASSP 149 (295)
Q Consensus 84 --------~~~~~~~~~~~~~l~~~~~~l~----~~-~~~~lv~~G~~~G-~~~~~~a~~~p~~v~~lil~~~p~~~~~~ 149 (295)
+...|+......|+.++++.+. ++ +++.++ |+|+| .+++.+|..+| +++++++.+ |....
T Consensus 155 ~~~~~g~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~--G~S~GG~la~~~a~~~p-~v~~~vl~~-p~~~~-- 228 (337)
T 1vlq_A 155 GFMTRGILDPRTYYYRRVFTDAVRAVEAAASFPQVDQERIVIA--GGSQGGGIALAVSALSK-KAKALLCDV-PFLCH-- 228 (337)
T ss_dssp SSTTTTTTCTTTCHHHHHHHHHHHHHHHHHTSTTEEEEEEEEE--EETHHHHHHHHHHHHCS-SCCEEEEES-CCSCC--
T ss_pred cccccCCCCHHHhHHHHHHHHHHHHHHHHHhCCCCCCCeEEEE--EeCHHHHHHHHHHhcCC-CccEEEECC-CcccC--
Confidence 0012233466777777777662 11 235555 77765 56777888898 589888764 43211
Q ss_pred CchhhhhhhcccchhhhhhhHHHHHHHHHhCCCccccccccccccccccccCCchhHHHHHHHhcchhhhhHhhhcCcCC
Q 022534 150 LPGLFQQLRIPLLGEFTAQNAIMAERFIEAGSPYVLKLDKADVYRLPYLASSGPGFALLEAARKVNFKDISSRIGAGFSS 229 (295)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (295)
... .........+. . ...+.... +. ............+ ....+
T Consensus 229 ~~~---~~~~~~~~~~~---~--~~~~~~~~-~~-------------------~~~~~~~~~~~~~---~~~~~------ 271 (337)
T 1vlq_A 229 FRR---AVQLVDTHPYA---E--ITNFLKTH-RD-------------------KEEIVFRTLSYFD---GVNFA------ 271 (337)
T ss_dssp HHH---HHHHCCCTTHH---H--HHHHHHHC-TT-------------------CHHHHHHHHHTTC---HHHHH------
T ss_pred HHH---HHhcCCCcchH---H--HHHHHHhC-ch-------------------hHHHHHHhhhhcc---HHHHH------
Confidence 000 00000000000 0 01111100 00 0001111111111 11111
Q ss_pred CCCCCcEEEEEeCCCCCCCcchHHHHHhcCCCCeEEEEecCCCCCCCCCChHHHHHHHHHHHHh
Q 022534 230 GSWDKPVLVAWGISDKYLPQSVAEEFQKGNPNVVKLQMIEGAGHMPQEDWPEKVVDGLRYFFLN 293 (295)
Q Consensus 230 ~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 293 (295)
.++++|+|+++|++|.+++++.+..+.+.++..+++++++++||.... ++..+.+.+||..
T Consensus 272 ~~i~~P~lii~G~~D~~~p~~~~~~~~~~l~~~~~~~~~~~~gH~~~~---~~~~~~~~~fl~~ 332 (337)
T 1vlq_A 272 ARAKIPALFSVGLMDNICPPSTVFAAYNYYAGPKEIRIYPYNNHEGGG---SFQAVEQVKFLKK 332 (337)
T ss_dssp TTCCSCEEEEEETTCSSSCHHHHHHHHHHCCSSEEEEEETTCCTTTTH---HHHHHHHHHHHHH
T ss_pred HHcCCCEEEEeeCCCCCCCchhHHHHHHhcCCCcEEEEcCCCCCCCcc---hhhHHHHHHHHHH
Confidence 256899999999999999999999988888755899999999999532 2344555555543
|
| >3tej_A Enterobactin synthase component F; nonribosomal peptide, thioesterase, carrier domain, ATP- BIN enterobactin biosynthesis, ION transport, iron; HET: UF0; 1.90A {Escherichia coli} PDB: 2roq_A | Back alignment and structure |
|---|
Probab=99.79 E-value=7.9e-19 Score=153.95 Aligned_cols=222 Identities=13% Similarity=0.067 Sum_probs=139.5
Q ss_pred CceEEEEcCCCCCCccchhhHHHhhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCceEEEE
Q 022534 35 LGTIVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEELDKLLDVLEVKYPFFLVV 114 (295)
Q Consensus 35 ~~~vv~lHG~~~~~~~w~~~~~~l~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~~lv~ 114 (295)
.++|+|+||++++...|..+++.|.. +|+|+++|+||||.|..+. .+++++++++.+.+..+....+++|+
T Consensus 101 ~~~l~~lhg~~~~~~~~~~l~~~L~~-~~~v~~~d~~g~~~~~~~~-------~~~~~~a~~~~~~i~~~~~~~~~~l~- 171 (329)
T 3tej_A 101 GPTLFCFHPASGFAWQFSVLSRYLDP-QWSIIGIQSPRPNGPMQTA-------ANLDEVCEAHLATLLEQQPHGPYYLL- 171 (329)
T ss_dssp SCEEEEECCTTSCCGGGGGGGGTSCT-TCEEEEECCCTTTSHHHHC-------SSHHHHHHHHHHHHHHHCSSSCEEEE-
T ss_pred CCcEEEEeCCcccchHHHHHHHhcCC-CCeEEEeeCCCCCCCCCCC-------CCHHHHHHHHHHHHHHhCCCCCEEEE-
Confidence 46999999999999999999999964 7999999999999876421 26788999988888776445578887
Q ss_pred ecccch-HHHHHHHHh---CcCccceeEEEcCCCCCCCCCchhhhhhhcccchhhhhhhHHHHHHHHHhCCCcccccccc
Q 022534 115 QGFLVG-SYGLTWALK---NPSRISKLAILNSPLTASSPLPGLFQQLRIPLLGEFTAQNAIMAERFIEAGSPYVLKLDKA 190 (295)
Q Consensus 115 ~G~~~G-~~~~~~a~~---~p~~v~~lil~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (295)
|||+| .++..+|.+ +|++|.+++++++.......+... ....+..............+........
T Consensus 172 -G~S~Gg~ia~~~a~~L~~~~~~v~~lvl~d~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~------ 241 (329)
T 3tej_A 172 -GYSLGGTLAQGIAARLRARGEQVAFLGLLDTWPPETQNWQEK---EANGLDPEVLAEINREREAFLAAQQGST------ 241 (329)
T ss_dssp -EETHHHHHHHHHHHHHHHTTCCEEEEEEESCCCTHHHHTC--------CCCCTHHHHHHHHHHHHHHTTCCCS------
T ss_pred -EEccCHHHHHHHHHHHHhcCCcccEEEEeCCCCCCccccccc---cccccChhhHHHHHHHHHHHHHhccccc------
Confidence 77776 467888887 999999999997643210000000 0000000000000000011111100000
Q ss_pred ccccccccccCCchhHHHHHHHhcchhhhhHhhhcCcCCCCCCCcEEEEEeCCCCCCCcchHHHHHhcCCCCeEEEEecC
Q 022534 191 DVYRLPYLASSGPGFALLEAARKVNFKDISSRIGAGFSSGSWDKPVLVAWGISDKYLPQSVAEEFQKGNPNVVKLQMIEG 270 (295)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~ 270 (295)
.. ......... +.... .+...+....+++|+++++|++|...+......+.+..++ ++++.++
T Consensus 242 -----------~~--~~~~~~~~~-~~~~~-~~~~~~~~~~~~~pv~l~~~~~d~~~~~~~~~~w~~~~~~-~~~~~v~- 304 (329)
T 3tej_A 242 -----------ST--ELFTTIEGN-YADAV-RLLTTAHSVPFDGKATLFVAERTLQEGMSPERAWSPWIAE-LDIYRQD- 304 (329)
T ss_dssp -----------CC--HHHHHHHHH-HHHHH-HHHTTCCCCCEEEEEEEEEEGGGCCTTCCHHHHHTTTEEE-EEEEEES-
T ss_pred -----------cH--HHHHHHHHH-HHHHH-HHHhcCCCCCcCCCeEEEEeccCCCCCCCchhhHHHhcCC-cEEEEec-
Confidence 00 011111000 01111 1112223347789999999999987777666667776664 7999997
Q ss_pred CCCCCCCCCh--HHHHHHHHHHHH
Q 022534 271 AGHMPQEDWP--EKVVDGLRYFFL 292 (295)
Q Consensus 271 ~gH~~~~e~p--~~~~~~i~~fl~ 292 (295)
+||+.+++.| +++++.|.+||.
T Consensus 305 g~H~~~~~~~~~~~ia~~l~~~L~ 328 (329)
T 3tej_A 305 CAHVDIISPGTFEKIGPIIRATLN 328 (329)
T ss_dssp SCGGGGGSTTTHHHHHHHHHHHHC
T ss_pred CChHHhCCChHHHHHHHHHHHHhc
Confidence 8999888877 899999999985
|
| >3lp5_A Putative cell surface hydrolase; structural genom PSI2, MCSG, protein structure initiative, midwest center FO structural genomics; 2.00A {Lactobacillus plantarum} | Back alignment and structure |
|---|
Probab=99.79 E-value=4.6e-19 Score=149.09 Aligned_cols=193 Identities=11% Similarity=0.141 Sum_probs=129.6
Q ss_pred CceEEEEcCCCCCCccchhhHHHhhhCC---CeEEEeCCCCCCCCC--CCC------CC----CC-C-CCC-CHHHHHHH
Q 022534 35 LGTIVFLHGAPSHSYSYRNVMSQMSDAG---FHCFAPDWLGFGFSD--KPE------KG----YD-D-FDF-TENEFHEE 96 (295)
Q Consensus 35 ~~~vv~lHG~~~~~~~w~~~~~~l~~~~---~~via~Dl~G~G~S~--~~~------~~----~~-~-~~~-~~~~~~~~ 96 (295)
.+||||+|||++++..|+.+++.|++.+ ++|+.+|++++|.+. ... +. ++ + ..| +++.++++
T Consensus 4 ~~pvv~iHG~~~~~~~~~~~~~~L~~~~~~~~~vi~~~v~~~G~~~~~G~~~~~~~~P~i~v~f~~n~~~~~~~~~~a~~ 83 (250)
T 3lp5_A 4 MAPVIMVPGSSASQNRFDSLITELGKETPKKHSVLKLTVQTDGTIKYSGSIAANDNEPFIVIGFANNRDGKANIDKQAVW 83 (250)
T ss_dssp CCCEEEECCCGGGHHHHHHHHHHHHHHSSSCCCEEEEEECTTSCEEEEECCCTTCSSCEEEEEESCCCCSHHHHHHHHHH
T ss_pred CCCEEEECCCCCCHHHHHHHHHHHHhcCCCCceEEEEEEecCCeEEEeeecCCCCcCCeEEEEeccCCCcccCHHHHHHH
Confidence 3589999999999999999999998755 789999999888732 110 00 00 0 112 45677888
Q ss_pred HHHHHHHh----CCCCceEEEEecccchH-HHHHHHHhC-----cCccceeEEEcCCCCCCCCCchhhhhhhcccchhhh
Q 022534 97 LDKLLDVL----EVKYPFFLVVQGFLVGS-YGLTWALKN-----PSRISKLAILNSPLTASSPLPGLFQQLRIPLLGEFT 166 (295)
Q Consensus 97 l~~~~~~l----~~~~~~~lv~~G~~~G~-~~~~~a~~~-----p~~v~~lil~~~p~~~~~~~~~~~~~~~~~~~~~~~ 166 (295)
+.++++.+ +.+ ++++| |||+|+ ++..++.++ |++|+++|++++|.......+. ..
T Consensus 84 l~~~~~~l~~~~~~~-~~~lv--GHSmGg~~a~~~~~~~~~~~~~~~v~~lv~l~~p~~g~~~~~~---------~~--- 148 (250)
T 3lp5_A 84 LNTAFKALVKTYHFN-HFYAL--GHSNGGLIWTLFLERYLKESPKVHIDRLMTIASPYNMESTSTT---------AK--- 148 (250)
T ss_dssp HHHHHHHHHTTSCCS-EEEEE--EETHHHHHHHHHHHHTGGGSTTCEEEEEEEESCCTTTTCCCSS---------CC---
T ss_pred HHHHHHHHHHHcCCC-CeEEE--EECHhHHHHHHHHHHccccccchhhCEEEEECCCCCccccccc---------cc---
Confidence 88888887 665 46676 777765 566777776 6789999999887654311100 00
Q ss_pred hhhHHHHHHHHHhCCCccccccccccccccccccCCchhHHHHHHHhcchhhhhHhhhcCcCCCCCCCcEEEEEeC----
Q 022534 167 AQNAIMAERFIEAGSPYVLKLDKADVYRLPYLASSGPGFALLEAARKVNFKDISSRIGAGFSSGSWDKPVLVAWGI---- 242 (295)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~---- 242 (295)
. ..+..+. +....+ . + ++|+++|+|+
T Consensus 149 --~------------------------------------~~~~~l~-----~~~~~l----p--~-~vpvl~I~G~~~~~ 178 (250)
T 3lp5_A 149 --T------------------------------------SMFKELY-----RYRTGL----P--E-SLTVYSIAGTENYT 178 (250)
T ss_dssp --C------------------------------------HHHHHHH-----HTGGGS----C--T-TCEEEEEECCCCCC
T ss_pred --C------------------------------------HHHHHHH-----hccccC----C--C-CceEEEEEecCCCC
Confidence 0 0000000 000111 1 2 6999999999
Q ss_pred CCCCCCcchHHHHHhcCCCC---eEEEEe--cCCCCCCCCCChHHHHHHHHHHHHh
Q 022534 243 SDKYLPQSVAEEFQKGNPNV---VKLQMI--EGAGHMPQEDWPEKVVDGLRYFFLN 293 (295)
Q Consensus 243 ~D~~~~~~~~~~~~~~~~~~---~~~~~i--~~~gH~~~~e~p~~~~~~i~~fl~~ 293 (295)
.|.++|.+.+..++..+++. .+.+.+ ++++|..+.|+| +|++.|.+||..
T Consensus 179 ~Dg~Vp~~sa~~l~~l~~~~~~~~~~~~v~g~~a~H~~l~e~~-~v~~~I~~FL~~ 233 (250)
T 3lp5_A 179 SDGTVPYNSVNYGKYIFQDQVKHFTEITVTGANTAHSDLPQNK-QIVSLIRQYLLA 233 (250)
T ss_dssp TTTBCCHHHHTTHHHHHTTTSSEEEEEECTTTTBSSCCHHHHH-HHHHHHHHHTSC
T ss_pred CCceeeHHHHHHHHHHhcccccceEEEEEeCCCCchhcchhCH-HHHHHHHHHHhc
Confidence 89999998887766655432 122334 468899999999 899999999964
|
| >2fx5_A Lipase; alpha-beta hydrolase; HET: TLA; 1.80A {Pseudomonas mendocina} | Back alignment and structure |
|---|
Probab=99.79 E-value=5.8e-18 Score=142.96 Aligned_cols=182 Identities=13% Similarity=0.036 Sum_probs=122.7
Q ss_pred EEEEEEEcCCC-CCCCceEEEEcCCCCCCccchhhHHHhhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH
Q 022534 21 YRWFVRETGSA-DSRLGTIVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEELDK 99 (295)
Q Consensus 21 ~~~~~~~~g~~-~~~~~~vv~lHG~~~~~~~w~~~~~~l~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~l~~ 99 (295)
..+++...... ..+.|+|||+||++++...|..+++.|+++||+|+++|+||. .... ......+.+.+
T Consensus 34 ~~~~~p~~~~~~g~~~p~vv~~HG~~~~~~~~~~~~~~l~~~G~~v~~~d~~~s---~~~~--------~~~~~~~~l~~ 102 (258)
T 2fx5_A 34 CRIYRPRDLGQGGVRHPVILWGNGTGAGPSTYAGLLSHWASHGFVVAAAETSNA---GTGR--------EMLACLDYLVR 102 (258)
T ss_dssp EEEEEESSTTGGGCCEEEEEEECCTTCCGGGGHHHHHHHHHHTCEEEEECCSCC---TTSH--------HHHHHHHHHHH
T ss_pred EEEEeCCCCcccCCCceEEEEECCCCCCchhHHHHHHHHHhCCeEEEEecCCCC---ccHH--------HHHHHHHHHHh
Confidence 55665442111 113578999999999999999999999877999999999953 1110 11223333333
Q ss_pred HHH--------HhCCCCceEEEEecccchH-HHHHHHHhCcCccceeEEEcCCCCCCCCCchhhhhhhcccchhhhhhhH
Q 022534 100 LLD--------VLEVKYPFFLVVQGFLVGS-YGLTWALKNPSRISKLAILNSPLTASSPLPGLFQQLRIPLLGEFTAQNA 170 (295)
Q Consensus 100 ~~~--------~l~~~~~~~lv~~G~~~G~-~~~~~a~~~p~~v~~lil~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (295)
..+ .++.+ +++++ |||+|+ +++.+| .++++++++++++ ....
T Consensus 103 ~~~~~~~~~~~~~~~~-~i~l~--G~S~GG~~a~~~a--~~~~v~~~v~~~~-~~~~----------------------- 153 (258)
T 2fx5_A 103 ENDTPYGTYSGKLNTG-RVGTS--GHSQGGGGSIMAG--QDTRVRTTAPIQP-YTLG----------------------- 153 (258)
T ss_dssp HHHSSSSTTTTTEEEE-EEEEE--EEEHHHHHHHHHT--TSTTCCEEEEEEE-CCSS-----------------------
T ss_pred cccccccccccccCcc-ceEEE--EEChHHHHHHHhc--cCcCeEEEEEecC-cccc-----------------------
Confidence 332 23333 46666 777765 455544 5668888887742 1100
Q ss_pred HHHHHHHHhCCCccccccccccccccccccCCchhHHHHHHHhcchhhhhHhhhcCcCCCCCCCcEEEEEeCCCCCCCcc
Q 022534 171 IMAERFIEAGSPYVLKLDKADVYRLPYLASSGPGFALLEAARKVNFKDISSRIGAGFSSGSWDKPVLVAWGISDKYLPQS 250 (295)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~~~~ 250 (295)
.+ +. ... + .++++|+|+|+|++|.+++.+
T Consensus 154 ----------~~--------------~~------------------~~~---~------~~i~~P~lii~G~~D~~~~~~ 182 (258)
T 2fx5_A 154 ----------LG--------------HD------------------SAS---Q------RRQQGPMFLMSGGGDTIAFPY 182 (258)
T ss_dssp ----------TT--------------CC------------------GGG---G------GCCSSCEEEEEETTCSSSCHH
T ss_pred ----------cc--------------cc------------------hhh---h------ccCCCCEEEEEcCCCcccCch
Confidence 00 00 000 0 145799999999999999987
Q ss_pred h-HHHHHhcCCCCeEEEEecCCCCCCCCCChHHHHHHHHHHHHh
Q 022534 251 V-AEEFQKGNPNVVKLQMIEGAGHMPQEDWPEKVVDGLRYFFLN 293 (295)
Q Consensus 251 ~-~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 293 (295)
. +..+.+.....+++++++++||+.+.|+++++.+.|.+||..
T Consensus 183 ~~~~~~~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~i~~fl~~ 226 (258)
T 2fx5_A 183 LNAQPVYRRANVPVFWGERRYVSHFEPVGSGGAYRGPSTAWFRF 226 (258)
T ss_dssp HHTHHHHHHCSSCEEEEEESSCCTTSSTTTCGGGHHHHHHHHHH
T ss_pred hhHHHHHhccCCCeEEEEECCCCCccccchHHHHHHHHHHHHHH
Confidence 6 777776643347999999999999999999999999999974
|
| >3hlk_A Acyl-coenzyme A thioesterase 2, mitochondrial; alpha/beta hydrolase, alternative splicing, hydrolase, mitochondrion, polymorphism, serine esterase; 2.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.78 E-value=1.7e-18 Score=157.97 Aligned_cols=101 Identities=23% Similarity=0.262 Sum_probs=73.3
Q ss_pred CCceEEEEcCCCCCCccchhhHHHhhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCC-CceEE
Q 022534 34 RLGTIVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEELDKLLDVLEVK-YPFFL 112 (295)
Q Consensus 34 ~~~~vv~lHG~~~~~~~w~~~~~~l~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~-~~~~l 112 (295)
+.|+||++||++++...| .+..|+++||+|+++|+||+|.+..+.. .+..+++.+.+..+.+..+++ .++.+
T Consensus 173 ~~P~Vv~lhG~~~~~~~~--~a~~La~~Gy~Vla~D~rG~~~~~~~~~-----~~~~~d~~~a~~~l~~~~~vd~~~i~l 245 (446)
T 3hlk_A 173 PFPGIVDMFGTGGGLLEY--RASLLAGKGFAVMALAYYNYEDLPKTME-----TLHLEYFEEAMNYLLSHPEVKGPGVGL 245 (446)
T ss_dssp CBCEEEEECCSSCSCCCH--HHHHHHTTTCEEEEECCSSSTTSCSCCS-----EEEHHHHHHHHHHHHTSTTBCCSSEEE
T ss_pred CCCEEEEECCCCcchhhH--HHHHHHhCCCEEEEeccCCCCCCCcchh-----hCCHHHHHHHHHHHHhCCCCCCCCEEE
Confidence 457999999998765444 4788988899999999999998875432 124566666666665554442 35666
Q ss_pred EEecccch-HHHHHHHHhCcCccceeEEEcCCC
Q 022534 113 VVQGFLVG-SYGLTWALKNPSRISKLAILNSPL 144 (295)
Q Consensus 113 v~~G~~~G-~~~~~~a~~~p~~v~~lil~~~p~ 144 (295)
+ |||+| .+++.+|..+|+ |+++|+++++.
T Consensus 246 ~--G~S~GG~lAl~~A~~~p~-v~a~V~~~~~~ 275 (446)
T 3hlk_A 246 L--GISKGGELCLSMASFLKG-ITAAVVINGSV 275 (446)
T ss_dssp E--EETHHHHHHHHHHHHCSC-EEEEEEESCCS
T ss_pred E--EECHHHHHHHHHHHhCCC-ceEEEEEcCcc
Confidence 6 77765 568888999998 89998886543
|
| >2o7r_A CXE carboxylesterase; alpha/beta hydrolase; 1.40A {Actinidia eriantha} PDB: 2o7v_A | Back alignment and structure |
|---|
Probab=99.78 E-value=1.1e-17 Score=146.70 Aligned_cols=221 Identities=19% Similarity=0.206 Sum_probs=120.8
Q ss_pred CCCceEEEEcCCCC---CCc--cchhhHHHhh-hCCCeEEEeCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH---
Q 022534 33 SRLGTIVFLHGAPS---HSY--SYRNVMSQMS-DAGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEELDKLLDV--- 103 (295)
Q Consensus 33 ~~~~~vv~lHG~~~---~~~--~w~~~~~~l~-~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~l~~~~~~--- 103 (295)
.+.|+||++||++. +.. .|..++..|+ +.||.|+++|+||+|.+..+. ..++....+..+.+.
T Consensus 81 ~~~p~vv~~HGgg~~~~~~~~~~~~~~~~~la~~~g~~vv~~d~rg~~~~~~~~--------~~~d~~~~~~~l~~~~~~ 152 (338)
T 2o7r_A 81 AKLPLVVYFHGGGFILFSAASTIFHDFCCEMAVHAGVVIASVDYRLAPEHRLPA--------AYDDAMEALQWIKDSRDE 152 (338)
T ss_dssp CCEEEEEEECCSTTTSCCTTBHHHHHHHHHHHHHHTCEEEEEECCCTTTTCTTH--------HHHHHHHHHHHHHTCCCH
T ss_pred CCceEEEEEcCCcCcCCCCCchhHHHHHHHHHHHCCcEEEEecCCCCCCCCCch--------HHHHHHHHHHHHHhCCcc
Confidence 34689999999763 223 2888899997 569999999999988654321 123333333333322
Q ss_pred -----hCCCCceEEEEecccch-HHHHHHHHhCcC--------ccceeEEEcCCCCCCCCCchhhhhhhcccchhhhhhh
Q 022534 104 -----LEVKYPFFLVVQGFLVG-SYGLTWALKNPS--------RISKLAILNSPLTASSPLPGLFQQLRIPLLGEFTAQN 169 (295)
Q Consensus 104 -----l~~~~~~~lv~~G~~~G-~~~~~~a~~~p~--------~v~~lil~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (295)
++.+ .++|+ |||+| .+++.+|.++|+ +|+++|++++.................+..... ..
T Consensus 153 ~~~~~~d~~-~v~l~--G~S~GG~ia~~~a~~~~~~~~~~~~~~v~~~vl~~p~~~~~~~~~~~~~~~~~~~~~~~--~~ 227 (338)
T 2o7r_A 153 WLTNFADFS-NCFIM--GESAGGNIAYHAGLRAAAVADELLPLKIKGLVLDEPGFGGSKRTGSELRLANDSRLPTF--VL 227 (338)
T ss_dssp HHHHHEEEE-EEEEE--EETHHHHHHHHHHHHHHTTHHHHTTCCEEEEEEESCCCCCSSCCHHHHHTTTCSSSCHH--HH
T ss_pred hhhccCCcc-eEEEE--EeCccHHHHHHHHHHhccccccCCCCceeEEEEECCccCCCcCChhhhccCCCcccCHH--HH
Confidence 2223 46666 67765 578888888888 899999885433222111111000000110000 00
Q ss_pred HHHHHHHHHhCCCccccccccccccccccccCCchhHHHHHHHhcchhhhhHhhhcCcCCCCCCCcEEEEEeCCCCCCCc
Q 022534 170 AIMAERFIEAGSPYVLKLDKADVYRLPYLASSGPGFALLEAARKVNFKDISSRIGAGFSSGSWDKPVLVAWGISDKYLPQ 249 (295)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~~~ 249 (295)
......+..... ........+.. .. .... ....+. .+.+|+|+++|++|.+++.
T Consensus 228 ~~~~~~~~~~~~------~~~~~~~~~~~-------~~------~~~~-~~~~l~------~~~~P~Lvi~G~~D~~~~~ 281 (338)
T 2o7r_A 228 DLIWELSLPMGA------DRDHEYCNPTA-------ES------EPLY-SFDKIR------SLGWRVMVVGCHGDPMIDR 281 (338)
T ss_dssp HHHHHHHSCTTC------CTTSTTTCCC-----------------CCT-HHHHHH------HHTCEEEEEEETTSTTHHH
T ss_pred HHHHHHhCCCCC------CCCCcccCCCC-------CC------cccc-cHhhhc------CCCCCEEEEECCCCcchHH
Confidence 000011110000 00000000000 00 0000 011111 2357999999999998863
Q ss_pred c--hHHHHHhcCCCCeEEEEecCCCCCCCCCCh---HHHHHHHHHHHHh
Q 022534 250 S--VAEEFQKGNPNVVKLQMIEGAGHMPQEDWP---EKVVDGLRYFFLN 293 (295)
Q Consensus 250 ~--~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p---~~~~~~i~~fl~~ 293 (295)
. ..+.+.+..+ .+++++++++||.+++++| +++.+.|.+||.+
T Consensus 282 ~~~~~~~l~~~~~-~~~~~~~~g~gH~~~~~~~~~~~~~~~~i~~Fl~~ 329 (338)
T 2o7r_A 282 QMELAERLEKKGV-DVVAQFDVGGYHAVKLEDPEKAKQFFVILKKFVVD 329 (338)
T ss_dssp HHHHHHHHHHTTC-EEEEEEESSCCTTGGGTCHHHHHHHHHHHHHHHC-
T ss_pred HHHHHHHHHHCCC-cEEEEEECCCceEEeccChHHHHHHHHHHHHHHHh
Confidence 3 2444544444 4799999999999988777 8999999999965
|
| >3b5e_A MLL8374 protein; NP_108484.1, carboxylesterase, structural genomics, joint CE structural genomics, JCSG, protein structure initiative; 1.75A {Mesorhizobium loti} SCOP: c.69.1.14 | Back alignment and structure |
|---|
Probab=99.78 E-value=1.4e-18 Score=143.12 Aligned_cols=188 Identities=12% Similarity=0.034 Sum_probs=124.1
Q ss_pred cEEEEEEEcCCCCCCCceEEEEcCCCCCCccchhhHHHhhhCCCeEEEeCCCCCCC---CCCCCCCC-CCCCCCHHHHHH
Q 022534 20 EYRWFVRETGSADSRLGTIVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGFGF---SDKPEKGY-DDFDFTENEFHE 95 (295)
Q Consensus 20 ~~~~~~~~~g~~~~~~~~vv~lHG~~~~~~~w~~~~~~l~~~~~~via~Dl~G~G~---S~~~~~~~-~~~~~~~~~~~~ 95 (295)
+..++|....+..+.+|+|||+||++++...|..+++.|++ +|+|+++|.||+.. +-...... .....+....++
T Consensus 15 ~~~l~~~~~~~~~~~~p~vv~lHG~g~~~~~~~~~~~~l~~-~~~vv~~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 93 (223)
T 3b5e_A 15 DLAFPYRLLGAGKESRECLFLLHGSGVDETTLVPLARRIAP-TATLVAARGRIPQEDGFRWFERIDPTRFEQKSILAETA 93 (223)
T ss_dssp SSSSCEEEESTTSSCCCEEEEECCTTBCTTTTHHHHHHHCT-TSEEEEECCSEEETTEEESSCEEETTEECHHHHHHHHH
T ss_pred CCCceEEEeCCCCCCCCEEEEEecCCCCHHHHHHHHHhcCC-CceEEEeCCCCCcCCccccccccCCCcccHHHHHHHHH
Confidence 44455555554333458999999999999999999999986 89999999987521 11100000 000112344556
Q ss_pred HHHHHHHHh----CCC-CceEEEEecccch-HHHHHHHHhCcCccceeEEEcCCCCCCCCCchhhhhhhcccchhhhhhh
Q 022534 96 ELDKLLDVL----EVK-YPFFLVVQGFLVG-SYGLTWALKNPSRISKLAILNSPLTASSPLPGLFQQLRIPLLGEFTAQN 169 (295)
Q Consensus 96 ~l~~~~~~l----~~~-~~~~lv~~G~~~G-~~~~~~a~~~p~~v~~lil~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (295)
++.++++.+ +++ ++++++ |||+| .+++.+|.++|+++++++++++.....
T Consensus 94 ~~~~~i~~~~~~~~~~~~~i~l~--G~S~Gg~~a~~~a~~~~~~~~~~v~~~~~~~~~---------------------- 149 (223)
T 3b5e_A 94 AFAAFTNEAAKRHGLNLDHATFL--GYSNGANLVSSLMLLHPGIVRLAALLRPMPVLD---------------------- 149 (223)
T ss_dssp HHHHHHHHHHHHHTCCGGGEEEE--EETHHHHHHHHHHHHSTTSCSEEEEESCCCCCS----------------------
T ss_pred HHHHHHHHHHHHhCCCCCcEEEE--EECcHHHHHHHHHHhCccccceEEEecCccCcc----------------------
Confidence 666666554 442 346666 77766 567888899999999999885421100
Q ss_pred HHHHHHHHHhCCCccccccccccccccccccCCchhHHHHHHHhcchhhhhHhhhcCcCCCCCCCcEEEEEeCCCCCCCc
Q 022534 170 AIMAERFIEAGSPYVLKLDKADVYRLPYLASSGPGFALLEAARKVNFKDISSRIGAGFSSGSWDKPVLVAWGISDKYLPQ 249 (295)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~~~ 249 (295)
.. + .....++|+++++|++|.+++.
T Consensus 150 -----------~~-------------~-------------------------------~~~~~~~P~li~~G~~D~~v~~ 174 (223)
T 3b5e_A 150 -----------HV-------------P-------------------------------ATDLAGIRTLIIAGAADETYGP 174 (223)
T ss_dssp -----------SC-------------C-------------------------------CCCCTTCEEEEEEETTCTTTGG
T ss_pred -----------cc-------------c-------------------------------cccccCCCEEEEeCCCCCcCCH
Confidence 00 0 0002369999999999999998
Q ss_pred chHHHHHhcCCC---CeEEEEecCCCCCCCCCChHHHHHHHHHHHHh
Q 022534 250 SVAEEFQKGNPN---VVKLQMIEGAGHMPQEDWPEKVVDGLRYFFLN 293 (295)
Q Consensus 250 ~~~~~~~~~~~~---~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 293 (295)
+.+. +.+.++. .+++++++ +||....|.+ +.+.+||.+
T Consensus 175 ~~~~-~~~~l~~~g~~~~~~~~~-~gH~~~~~~~----~~i~~~l~~ 215 (223)
T 3b5e_A 175 FVPA-LVTLLSRHGAEVDARIIP-SGHDIGDPDA----AIVRQWLAG 215 (223)
T ss_dssp GHHH-HHHHHHHTTCEEEEEEES-CCSCCCHHHH----HHHHHHHHC
T ss_pred HHHH-HHHHHHHCCCceEEEEec-CCCCcCHHHH----HHHHHHHHh
Confidence 8887 7665542 47999999 9999865443 467777765
|
| >2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia} | Back alignment and structure |
|---|
Probab=99.77 E-value=2.5e-18 Score=165.67 Aligned_cols=222 Identities=15% Similarity=0.088 Sum_probs=139.2
Q ss_pred EeCc-EEEEEEEcCCCC----CCCceEEEEcCCCCCC---ccch-----hhHHHhhhCCCeEEEeCCCCCCCCCCCCCCC
Q 022534 17 KSGE-YRWFVRETGSAD----SRLGTIVFLHGAPSHS---YSYR-----NVMSQMSDAGFHCFAPDWLGFGFSDKPEKGY 83 (295)
Q Consensus 17 ~~~~-~~~~~~~~g~~~----~~~~~vv~lHG~~~~~---~~w~-----~~~~~l~~~~~~via~Dl~G~G~S~~~~~~~ 83 (295)
..+| ..+++..+.+.+ .+.|+||++||++++. ..|. .+++.|+++||.|+++|+||||.|..+....
T Consensus 494 ~~~g~~~l~~~~~~P~~~~~~~~~p~vv~~hG~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~g~s~~~~~~~ 573 (741)
T 2ecf_A 494 AADGKTPLNYSVIKPAGFDPAKRYPVAVYVYGGPASQTVTDSWPGRGDHLFNQYLAQQGYVVFSLDNRGTPRRGRDFGGA 573 (741)
T ss_dssp CTTSSCEEEEEEECCSSCCTTSCEEEEEECCCSTTCCSCSSCCCCSHHHHHHHHHHHTTCEEEEECCTTCSSSCHHHHHT
T ss_pred cCCCCEEEEEEEEeCCCCCCCCCcCEEEEEcCCCCcccccccccccchhHHHHHHHhCCCEEEEEecCCCCCCChhhhHH
Confidence 3377 888888776532 2347899999998764 4576 6788898889999999999999987531100
Q ss_pred CCCCCCHHHHHHHHHHHHHHhC----CC-CceEEEEecccchH-HHHHHHHhCcCccceeEEEcCCCCCCCCCchhhhhh
Q 022534 84 DDFDFTENEFHEELDKLLDVLE----VK-YPFFLVVQGFLVGS-YGLTWALKNPSRISKLAILNSPLTASSPLPGLFQQL 157 (295)
Q Consensus 84 ~~~~~~~~~~~~~l~~~~~~l~----~~-~~~~lv~~G~~~G~-~~~~~a~~~p~~v~~lil~~~p~~~~~~~~~~~~~~ 157 (295)
....+. .....|+.++++.+. ++ .++.++ |||+|+ +++.+|.++|+++++++++++ .... . ..
T Consensus 574 ~~~~~~-~~~~~d~~~~~~~l~~~~~~~~~~i~l~--G~S~GG~~a~~~a~~~p~~~~~~v~~~~-~~~~---~-~~--- 642 (741)
T 2ecf_A 574 LYGKQG-TVEVADQLRGVAWLKQQPWVDPARIGVQ--GWSNGGYMTLMLLAKASDSYACGVAGAP-VTDW---G-LY--- 642 (741)
T ss_dssp TTTCTT-THHHHHHHHHHHHHHTSTTEEEEEEEEE--EETHHHHHHHHHHHHCTTTCSEEEEESC-CCCG---G-GS---
T ss_pred Hhhhcc-cccHHHHHHHHHHHHhcCCCChhhEEEE--EEChHHHHHHHHHHhCCCceEEEEEcCC-Ccch---h-hh---
Confidence 000111 112344444444431 11 235565 777764 677888899999999988753 3210 0 00
Q ss_pred hcccchhhhhhhHHHHHHHHHhCCCccccccccccccccccccCCchhHHHHHHHhcchhhhhHhhhcCcCCCCCCCcEE
Q 022534 158 RIPLLGEFTAQNAIMAERFIEAGSPYVLKLDKADVYRLPYLASSGPGFALLEAARKVNFKDISSRIGAGFSSGSWDKPVL 237 (295)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l 237 (295)
. ....+++. +.+. .. ...+. ..+. ...+ .++++|+|
T Consensus 643 -----~------~~~~~~~~--~~~~----~~---------------~~~~~---~~~~---~~~~------~~i~~P~l 678 (741)
T 2ecf_A 643 -----D------SHYTERYM--DLPA----RN---------------DAGYR---EARV---LTHI------EGLRSPLL 678 (741)
T ss_dssp -----B------HHHHHHHH--CCTG----GG---------------HHHHH---HHCS---GGGG------GGCCSCEE
T ss_pred -----c------cccchhhc--CCcc----cC---------------hhhhh---hcCH---HHHH------hhCCCCEE
Confidence 0 00111111 1110 00 00000 0010 1111 25679999
Q ss_pred EEEeCCCCCCCcchHHHHHhcCC---CCeEEEEecCCCCCCCCCChHHHHHHHHHHHHh
Q 022534 238 VAWGISDKYLPQSVAEEFQKGNP---NVVKLQMIEGAGHMPQEDWPEKVVDGLRYFFLN 293 (295)
Q Consensus 238 ~i~G~~D~~~~~~~~~~~~~~~~---~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 293 (295)
+++|++|..++++.+..+++.++ ..+++++++++||..+.+.++++.+.|.+||..
T Consensus 679 ii~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~i~~fl~~ 737 (741)
T 2ecf_A 679 LIHGMADDNVLFTNSTSLMSALQKRGQPFELMTYPGAKHGLSGADALHRYRVAEAFLGR 737 (741)
T ss_dssp EEEETTCSSSCTHHHHHHHHHHHHTTCCCEEEEETTCCSSCCHHHHHHHHHHHHHHHHH
T ss_pred EEccCCCCCCCHHHHHHHHHHHHHCCCceEEEEECCCCCCCCCCchhHHHHHHHHHHHH
Confidence 99999999999988888776543 235999999999999988889999999999976
|
| >3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A | Back alignment and structure |
|---|
Probab=99.77 E-value=2e-18 Score=164.39 Aligned_cols=228 Identities=12% Similarity=0.069 Sum_probs=140.9
Q ss_pred CcEEEEEEEcCCCC--------CCCceEEEEcCCCCCCc--cchhhHHHhhhCCCeEEEeCCCC---CCCCCCCCCCCCC
Q 022534 19 GEYRWFVRETGSAD--------SRLGTIVFLHGAPSHSY--SYRNVMSQMSDAGFHCFAPDWLG---FGFSDKPEKGYDD 85 (295)
Q Consensus 19 ~~~~~~~~~~g~~~--------~~~~~vv~lHG~~~~~~--~w~~~~~~l~~~~~~via~Dl~G---~G~S~~~~~~~~~ 85 (295)
+|..+++..+.+.+ .+.|+||++||++++.. .|..+++.|+++||.|+++|+|| ||+|........-
T Consensus 400 dg~~i~~~~~~P~~~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~G~~~~~~~~~~~ 479 (662)
T 3azo_A 400 DGREIHAHIYPPHSPDFTGPADELPPYVVMAHGGPTSRVPAVLDLDVAYFTSRGIGVADVNYGGSTGYGRAYRERLRGRW 479 (662)
T ss_dssp TSCEEEEEEECCCCSSEECCTTCCCCEEEEECSSSSSCCCCSCCHHHHHHHTTTCEEEEEECTTCSSSCHHHHHTTTTTT
T ss_pred CCCEEEEEEECCCCccccCCCCCCccEEEEECCCCCccCcccchHHHHHHHhCCCEEEEECCCCCCCccHHHHHhhcccc
Confidence 67777776664432 23578999999987665 78899999988899999999999 8877532111000
Q ss_pred CCCCHHHHHHHHHHHHHH--hCCCCceEEEEecccchH-HHHHHHHhCcCccceeEEEcCCCCCCCCCchhhhhhhcccc
Q 022534 86 FDFTENEFHEELDKLLDV--LEVKYPFFLVVQGFLVGS-YGLTWALKNPSRISKLAILNSPLTASSPLPGLFQQLRIPLL 162 (295)
Q Consensus 86 ~~~~~~~~~~~l~~~~~~--l~~~~~~~lv~~G~~~G~-~~~~~a~~~p~~v~~lil~~~p~~~~~~~~~~~~~~~~~~~ 162 (295)
..+..+++.+.+..++++ ++.+ ++.++ |||+|+ +++.++. +|++++++++.++.... . .... ...
T Consensus 480 ~~~~~~d~~~~~~~l~~~~~~~~~-~i~l~--G~S~GG~~a~~~~~-~~~~~~~~v~~~~~~~~----~---~~~~-~~~ 547 (662)
T 3azo_A 480 GVVDVEDCAAVATALAEEGTADRA-RLAVR--GGSAGGWTAASSLV-STDVYACGTVLYPVLDL----L---GWAD-GGT 547 (662)
T ss_dssp TTHHHHHHHHHHHHHHHTTSSCTT-CEEEE--EETHHHHHHHHHHH-HCCCCSEEEEESCCCCH----H---HHHT-TCS
T ss_pred ccccHHHHHHHHHHHHHcCCcChh-hEEEE--EECHHHHHHHHHHh-CcCceEEEEecCCccCH----H---HHhc-ccc
Confidence 012457777888888777 3334 46665 777765 4545444 49999999887532210 0 0000 000
Q ss_pred hhhhhhhHHHHHHHHHhCCCccccccccccccccccccCCchhHHHHHHHhcchhhhhHhhhcCcCCCCCCCcEEEEEeC
Q 022534 163 GEFTAQNAIMAERFIEAGSPYVLKLDKADVYRLPYLASSGPGFALLEAARKVNFKDISSRIGAGFSSGSWDKPVLVAWGI 242 (295)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~ 242 (295)
..+. .. ..+.++ +.. ... ... ...... ...+ .++++|+|+++|+
T Consensus 548 ~~~~--~~-~~~~~~--~~~----~~~---------------~~~---~~~~sp---~~~~------~~~~~P~lii~G~ 591 (662)
T 3azo_A 548 HDFE--SR-YLDFLI--GSF----EEF---------------PER---YRDRAP---LTRA------DRVRVPFLLLQGL 591 (662)
T ss_dssp CGGG--TT-HHHHHT--CCT----TTC---------------HHH---HHHTCG---GGGG------GGCCSCEEEEEET
T ss_pred cchh--hH-hHHHHh--CCC----ccc---------------hhH---HHhhCh---HhHh------ccCCCCEEEEeeC
Confidence 0000 00 001111 000 000 000 110111 1111 2567999999999
Q ss_pred CCCCCCcchHHHHHhcCCC---CeEEEEecCCCCCC-CCCChHHHHHHHHHHHHhc
Q 022534 243 SDKYLPQSVAEEFQKGNPN---VVKLQMIEGAGHMP-QEDWPEKVVDGLRYFFLNY 294 (295)
Q Consensus 243 ~D~~~~~~~~~~~~~~~~~---~~~~~~i~~~gH~~-~~e~p~~~~~~i~~fl~~~ 294 (295)
+|..++++.+.++.+.++. .+++++++++||.. ..++++++.+.+.+||..+
T Consensus 592 ~D~~vp~~~~~~~~~~l~~~g~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~fl~~~ 647 (662)
T 3azo_A 592 EDPVCPPEQCDRFLEAVAGCGVPHAYLSFEGEGHGFRRKETMVRALEAELSLYAQV 647 (662)
T ss_dssp TCSSSCTHHHHHHHHHHTTSCCCEEEEEETTCCSSCCSHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHHHcCCCEEEEEECCCCCCCCChHHHHHHHHHHHHHHHHH
Confidence 9999999988888776553 35999999999986 4567889999999999763
|
| >1jji_A Carboxylesterase; alpha-beta hydrolase fold, hydrolase; HET: EPE; 2.20A {Archaeoglobus fulgidus} SCOP: c.69.1.2 | Back alignment and structure |
|---|
Probab=99.77 E-value=6.1e-18 Score=146.99 Aligned_cols=232 Identities=13% Similarity=0.110 Sum_probs=132.1
Q ss_pred EEeCcEEEEEEEcCCCCCCCceEEEEcCCC---CCCccchhhHHHhh-hCCCeEEEeCCCCCCCCCCCCCCCCCCCCCHH
Q 022534 16 IKSGEYRWFVRETGSADSRLGTIVFLHGAP---SHSYSYRNVMSQMS-DAGFHCFAPDWLGFGFSDKPEKGYDDFDFTEN 91 (295)
Q Consensus 16 ~~~~~~~~~~~~~g~~~~~~~~vv~lHG~~---~~~~~w~~~~~~l~-~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~ 91 (295)
+...+..+.+..+ ++..+.|+||++||++ ++...|..+...|+ +.||.|+++|+||+|.|..+.. .....
T Consensus 61 i~~~~g~i~~~~y-~~~~~~p~vv~~HGgg~~~g~~~~~~~~~~~la~~~g~~Vv~~dyrg~g~~~~p~~-----~~d~~ 134 (311)
T 1jji_A 61 IKGRNGDIRVRVY-QQKPDSPVLVYYHGGGFVICSIESHDALCRRIARLSNSTVVSVDYRLAPEHKFPAA-----VYDCY 134 (311)
T ss_dssp EEETTEEEEEEEE-ESSSSEEEEEEECCSTTTSCCTGGGHHHHHHHHHHHTSEEEEEECCCTTTSCTTHH-----HHHHH
T ss_pred ecCCCCcEEEEEE-cCCCCceEEEEECCcccccCChhHhHHHHHHHHHHhCCEEEEecCCCCCCCCCCCc-----HHHHH
Confidence 3333334444433 2223457999999998 88889999999998 4599999999999999976431 11234
Q ss_pred HHHHHHHHHHHHhCCC-CceEEEEecccch-HHHHHHHHhCcCc----cceeEEEcCCCCCCCCCchhhhhhh-cccchh
Q 022534 92 EFHEELDKLLDVLEVK-YPFFLVVQGFLVG-SYGLTWALKNPSR----ISKLAILNSPLTASSPLPGLFQQLR-IPLLGE 164 (295)
Q Consensus 92 ~~~~~l~~~~~~l~~~-~~~~lv~~G~~~G-~~~~~~a~~~p~~----v~~lil~~~p~~~~~~~~~~~~~~~-~~~~~~ 164 (295)
+.++++.+.++.++++ +++.++ |+|+| .+++.+|.++|++ +++++++++........+. ..... .++.
T Consensus 135 ~~~~~l~~~~~~~~~d~~~i~l~--G~S~GG~la~~~a~~~~~~~~~~~~~~vl~~p~~~~~~~~~~-~~~~~~~~~~-- 209 (311)
T 1jji_A 135 DATKWVAENAEELRIDPSKIFVG--GDSAGGNLAAAVSIMARDSGEDFIKHQILIYPVVNFVAPTPS-LLEFGEGLWI-- 209 (311)
T ss_dssp HHHHHHHHTHHHHTEEEEEEEEE--EETHHHHHHHHHHHHHHHTTCCCEEEEEEESCCCCSSSCCHH-HHHTSSSCSS--
T ss_pred HHHHHHHhhHHHhCCCchhEEEE--EeCHHHHHHHHHHHHHHhcCCCCceEEEEeCCccCCCCCCcc-HHHhcCCCcc--
Confidence 4556666666666665 235555 77765 5677788777765 9999988543322111111 11000 0000
Q ss_pred hhhhhHHHHHHHHHhCCCccccccccccccccccccCCchhHHHHHHHhcchhhhhHhhhcCcCCCCCCCcEEEEEeCCC
Q 022534 165 FTAQNAIMAERFIEAGSPYVLKLDKADVYRLPYLASSGPGFALLEAARKVNFKDISSRIGAGFSSGSWDKPVLVAWGISD 244 (295)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D 244 (295)
... . ....+.... .... .+. ..++ ..... ..+ .. -.|+++++|++|
T Consensus 210 -~~~-~-~~~~~~~~~----~~~~-~~~-~~~~------------------~~p~~----~~l--~~-~~P~li~~G~~D 255 (311)
T 1jji_A 210 -LDQ-K-IMSWFSEQY----FSRE-EDK-FNPL------------------ASVIF----ADL--EN-LPPALIITAEYD 255 (311)
T ss_dssp -CCH-H-HHHHHHHHH----CSSG-GGG-GCTT------------------TSGGG----SCC--TT-CCCEEEEEEEEC
T ss_pred -CCH-H-HHHHHHHHh----CCCC-ccC-CCcc------------------cCccc----ccc--cC-CChheEEEcCcC
Confidence 000 0 000010000 0000 000 0000 00000 000 12 259999999999
Q ss_pred CCCCcc--hHHHHHhcCCCCeEEEEecCCCCCCCC-----CChHHHHHHHHHHHHh
Q 022534 245 KYLPQS--VAEEFQKGNPNVVKLQMIEGAGHMPQE-----DWPEKVVDGLRYFFLN 293 (295)
Q Consensus 245 ~~~~~~--~~~~~~~~~~~~~~~~~i~~~gH~~~~-----e~p~~~~~~i~~fl~~ 293 (295)
++++.. .++.+.+.... ++++++++++|..+. +.++++.+.+.+||..
T Consensus 256 ~l~~~~~~~~~~l~~~g~~-~~~~~~~g~~H~~~~~~~~~~~~~~~~~~i~~fl~~ 310 (311)
T 1jji_A 256 PLRDEGEVFGQMLRRAGVE-ASIVRYRGVLHGFINYYPVLKAARDAINQIAALLVF 310 (311)
T ss_dssp TTHHHHHHHHHHHHHTTCC-EEEEEEEEEETTGGGGTTTCHHHHHHHHHHHHHHHC
T ss_pred cchHHHHHHHHHHHHcCCC-EEEEEECCCCeeccccCCcCHHHHHHHHHHHHHHhh
Confidence 987532 33555554444 899999999997654 3457889999999864
|
| >2hfk_A Pikromycin, type I polyketide synthase pikaiv; alpha/beta hydrolase, thioesterase; HET: E4H; 1.79A {Streptomyces venezuelae} PDB: 2h7x_A* 2h7y_A* 2hfj_A* 1mna_A 1mn6_A 1mnq_A | Back alignment and structure |
|---|
Probab=99.76 E-value=2.9e-17 Score=143.28 Aligned_cols=211 Identities=11% Similarity=0.091 Sum_probs=133.9
Q ss_pred eEEEEcC--CCCCCccchhhHHHhhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCceEEEE
Q 022534 37 TIVFLHG--APSHSYSYRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEELDKLLDVLEVKYPFFLVV 114 (295)
Q Consensus 37 ~vv~lHG--~~~~~~~w~~~~~~l~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~~lv~ 114 (295)
+++|+|| ++++...|..+++.|.. +|+|+++|+||||.|+..... ...++++++++++.+.++.+....+++|+
T Consensus 91 ~l~~~hg~g~~~~~~~~~~l~~~L~~-~~~v~~~d~~G~g~~~~~~~~--~~~~~~~~~a~~~~~~i~~~~~~~p~~l~- 166 (319)
T 2hfk_A 91 VLVGCTGTAANGGPHEFLRLSTSFQE-ERDFLAVPLPGYGTGTGTGTA--LLPADLDTALDAQARAILRAAGDAPVVLL- 166 (319)
T ss_dssp EEEEECCCCTTCSTTTTHHHHHTTTT-TCCEEEECCTTCCBC---CBC--CEESSHHHHHHHHHHHHHHHHTTSCEEEE-
T ss_pred cEEEeCCCCCCCcHHHHHHHHHhcCC-CCceEEecCCCCCCCcccccC--CCCCCHHHHHHHHHHHHHHhcCCCCEEEE-
Confidence 8999998 67888999999999974 899999999999998310000 11347889999999999887544567777
Q ss_pred ecccch-HHHHHHHHhC----cCccceeEEEcCCCCCCCCCchhhhhhhcccchhhhhhhHHHHHHHHHhCCCccccccc
Q 022534 115 QGFLVG-SYGLTWALKN----PSRISKLAILNSPLTASSPLPGLFQQLRIPLLGEFTAQNAIMAERFIEAGSPYVLKLDK 189 (295)
Q Consensus 115 ~G~~~G-~~~~~~a~~~----p~~v~~lil~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (295)
|||+| .++..+|.+. +++|+++++++++.... ...... ++. .+...++.. ...
T Consensus 167 -G~S~GG~vA~~~A~~l~~~~g~~v~~lvl~d~~~~~~---~~~~~~----~~~-------~l~~~~~~~---~~~---- 224 (319)
T 2hfk_A 167 -GHAGGALLAHELAFRLERAHGAPPAGIVLVDPYPPGH---QEPIEV----WSR-------QLGEGLFAG---ELE---- 224 (319)
T ss_dssp -EETHHHHHHHHHHHHHHHHHSCCCSEEEEESCCCTTS---CHHHHH----THH-------HHHHHHHHT---CSS----
T ss_pred -EECHHHHHHHHHHHHHHHhhCCCceEEEEeCCCCCCc---hhHHHH----HHH-------HhhHHHHHh---hcc----
Confidence 77766 4677777765 46799999997643211 110000 000 011111111 000
Q ss_pred cccccccccccCCchhHHHHHHHhcchhhhhHhhhcCcCCCCCCCcEEEEEeCCCCCCCcch-HHHHHhcCCCCeEEEEe
Q 022534 190 ADVYRLPYLASSGPGFALLEAARKVNFKDISSRIGAGFSSGSWDKPVLVAWGISDKYLPQSV-AEEFQKGNPNVVKLQMI 268 (295)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~~~~~-~~~~~~~~~~~~~~~~i 268 (295)
+.. .......... ... ...+....+++|+++++| +|+.++... ...+.+..+..++++.+
T Consensus 225 ------~~~---~~~~~~~~~~-----~~~----~~~~~~~~i~~Pvl~i~g-~D~~~~~~~~~~~~~~~~~~~~~~~~v 285 (319)
T 2hfk_A 225 ------PMS---DARLLAMGRY-----ARF----LAGPRPGRSSAPVLLVRA-SEPLGDWQEERGDWRAHWDLPHTVADV 285 (319)
T ss_dssp ------CCC---HHHHHHHHHH-----HHH----HHSCCCCCCCSCEEEEEE-SSCSSCCCGGGCCCSCCCSSCSEEEEE
T ss_pred ------ccc---hHHHHHHHHH-----HHH----HHhCCCCCcCCCEEEEEc-CCCCCCccccccchhhcCCCCCEEEEe
Confidence 000 0000000000 000 012223478999999999 999887765 45555555545799999
Q ss_pred cCCCCCCCC-CChHHHHHHHHHHHHh
Q 022534 269 EGAGHMPQE-DWPEKVVDGLRYFFLN 293 (295)
Q Consensus 269 ~~~gH~~~~-e~p~~~~~~i~~fl~~ 293 (295)
+ +||+.++ |+|+++++.|.+||.+
T Consensus 286 ~-g~H~~~~~e~~~~~~~~i~~~L~~ 310 (319)
T 2hfk_A 286 P-GDHFTMMRDHAPAVAEAVLSWLDA 310 (319)
T ss_dssp S-SCTTHHHHTCHHHHHHHHHHHHHH
T ss_pred C-CCcHHHHHHhHHHHHHHHHHHHHh
Confidence 9 6999754 8999999999999975
|
| >3u0v_A Lysophospholipase-like protein 1; alpha, beta hydrolase fold, hydrolase; 1.72A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.76 E-value=7.4e-18 Score=140.07 Aligned_cols=182 Identities=15% Similarity=0.152 Sum_probs=119.4
Q ss_pred CCCceEEEEcCCCCCCccchhhHHHhhhC-----CCeEEEeCCCCCCCCCCC-------------CCCCCCCCCCHHHHH
Q 022534 33 SRLGTIVFLHGAPSHSYSYRNVMSQMSDA-----GFHCFAPDWLGFGFSDKP-------------EKGYDDFDFTENEFH 94 (295)
Q Consensus 33 ~~~~~vv~lHG~~~~~~~w~~~~~~l~~~-----~~~via~Dl~G~G~S~~~-------------~~~~~~~~~~~~~~~ 94 (295)
++.|+|||+||++++...|..++..|..+ +|+|+++|.|+++.+... .........++++++
T Consensus 21 ~~~p~vv~lHG~g~~~~~~~~~~~~l~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~ 100 (239)
T 3u0v_A 21 RHSASLIFLHGSGDSGQGLRMWIKQVLNQDLTFQHIKIIYPTAPPRSYTPMKGGISNVWFDRFKITNDCPEHLESIDVMC 100 (239)
T ss_dssp CCCEEEEEECCTTCCHHHHHHHHHHHHTSCCCCSSEEEEEECCCEEECGGGTTCEEECSSCCSSSSSSSCCCHHHHHHHH
T ss_pred CCCcEEEEEecCCCchhhHHHHHHHHhhcccCCCceEEEeCCCCccccccCCCCccccceeccCCCcccccchhhHHHHH
Confidence 44689999999999999999999998753 699999998754321100 000001123567788
Q ss_pred HHHHHHHHHh-----CCCCceEEEEecccch-HHHHHHHHhCcCccceeEEEcCCCCCCCCCchhhhhhhcccchhhhhh
Q 022534 95 EELDKLLDVL-----EVKYPFFLVVQGFLVG-SYGLTWALKNPSRISKLAILNSPLTASSPLPGLFQQLRIPLLGEFTAQ 168 (295)
Q Consensus 95 ~~l~~~~~~l-----~~~~~~~lv~~G~~~G-~~~~~~a~~~p~~v~~lil~~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (295)
+++.++++.. +.+ +++|+ |||+| .+++.+|.++|+++++++++++..... .. .
T Consensus 101 ~~l~~~~~~~~~~~~~~~-~~~l~--G~S~Gg~~a~~~a~~~~~~~~~~v~~~~~~~~~----~~-----------~--- 159 (239)
T 3u0v_A 101 QVLTDLIDEEVKSGIKKN-RILIG--GFSMGGCMAMHLAYRNHQDVAGVFALSSFLNKA----SA-----------V--- 159 (239)
T ss_dssp HHHHHHHHHHHHTTCCGG-GEEEE--EETHHHHHHHHHHHHHCTTSSEEEEESCCCCTT----CH-----------H---
T ss_pred HHHHHHHHHHHHhCCCcc-cEEEE--EEChhhHHHHHHHHhCccccceEEEecCCCCch----hH-----------H---
Confidence 8888888873 333 46666 77776 567888899999999999885322100 00 0
Q ss_pred hHHHHHHHHHhCCCccccccccccccccccccCCchhHHHHHHHhcchhhhhHhhhcCcCCCCCCCc-EEEEEeCCCCCC
Q 022534 169 NAIMAERFIEAGSPYVLKLDKADVYRLPYLASSGPGFALLEAARKVNFKDISSRIGAGFSSGSWDKP-VLVAWGISDKYL 247 (295)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P-~l~i~G~~D~~~ 247 (295)
... . .. ...++| +++++|++|+++
T Consensus 160 ----~~~-----------------------------------~---------~~-------~~~~~pp~li~~G~~D~~v 184 (239)
T 3u0v_A 160 ----YQA-----------------------------------L---------QK-------SNGVLPELFQCHGTADELV 184 (239)
T ss_dssp ----HHH-----------------------------------H---------HH-------CCSCCCCEEEEEETTCSSS
T ss_pred ----HHH-----------------------------------H---------Hh-------hccCCCCEEEEeeCCCCcc
Confidence 000 0 00 023577 999999999999
Q ss_pred CcchHHHHHhcCC---CCeEEEEecCCCCCCCCCChHHHHHHHHHH
Q 022534 248 PQSVAEEFQKGNP---NVVKLQMIEGAGHMPQEDWPEKVVDGLRYF 290 (295)
Q Consensus 248 ~~~~~~~~~~~~~---~~~~~~~i~~~gH~~~~e~p~~~~~~i~~f 290 (295)
+.+.+..+.+.+. .++++++++++||....+..+.+.+.|.++
T Consensus 185 ~~~~~~~~~~~l~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~l~~~ 230 (239)
T 3u0v_A 185 LHSWAEETNSMLKSLGVTTKFHSFPNVYHELSKTELDILKLWILTK 230 (239)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEEEETTCCSSCCHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCcEEEEEeCCCCCcCCHHHHHHHHHHHHHh
Confidence 9877766655442 247999999999998744444444434333
|
| >1lzl_A Heroin esterase; alpha/beta hydrolase; 1.30A {Rhodococcus SP} SCOP: c.69.1.2 PDB: 1lzk_A | Back alignment and structure |
|---|
Probab=99.75 E-value=3.8e-17 Score=142.53 Aligned_cols=220 Identities=10% Similarity=0.013 Sum_probs=120.0
Q ss_pred CCceEEEEcCCC---CCCccchhhHHHhhh-CCCeEEEeCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCC-C
Q 022534 34 RLGTIVFLHGAP---SHSYSYRNVMSQMSD-AGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEELDKLLDVLEVK-Y 108 (295)
Q Consensus 34 ~~~~vv~lHG~~---~~~~~w~~~~~~l~~-~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~-~ 108 (295)
+.|+||++||++ ++...|..++..|++ .||.|+++|+||+|.|..+.. .......++.+.+.++.++++ +
T Consensus 78 ~~p~vv~~HGgg~~~g~~~~~~~~~~~la~~~G~~Vv~~d~rg~~~~~~~~~-----~~d~~~~~~~l~~~~~~~~~d~~ 152 (323)
T 1lzl_A 78 PVPVLLWIHGGGFAIGTAESSDPFCVEVARELGFAVANVEYRLAPETTFPGP-----VNDCYAALLYIHAHAEELGIDPS 152 (323)
T ss_dssp CEEEEEEECCSTTTSCCGGGGHHHHHHHHHHHCCEEEEECCCCTTTSCTTHH-----HHHHHHHHHHHHHTHHHHTEEEE
T ss_pred CCcEEEEECCCccccCChhhhHHHHHHHHHhcCcEEEEecCCCCCCCCCCch-----HHHHHHHHHHHHhhHHHcCCChh
Confidence 457999999998 888889999999876 389999999999999875321 001122333344444455553 3
Q ss_pred ceEEEEecccch-HHHHHHHHhCcC----ccceeEEEcCCCCCCCCCchhhhhh-hcccchhhhhhhHHHHHHHHHhCCC
Q 022534 109 PFFLVVQGFLVG-SYGLTWALKNPS----RISKLAILNSPLTASSPLPGLFQQL-RIPLLGEFTAQNAIMAERFIEAGSP 182 (295)
Q Consensus 109 ~~~lv~~G~~~G-~~~~~~a~~~p~----~v~~lil~~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (295)
+++++ |+|+| .+++.+|.++|+ .++++++++ |.............. ..+.+.. .........+......
T Consensus 153 ~i~l~--G~S~GG~la~~~a~~~~~~~~~~~~~~vl~~-p~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~ 227 (323)
T 1lzl_A 153 RIAVG--GQSAGGGLAAGTVLKARDEGVVPVAFQFLEI-PELDDRLETVSMTNFVDTPLWHR--PNAILSWKYYLGESYS 227 (323)
T ss_dssp EEEEE--EETHHHHHHHHHHHHHHHHCSSCCCEEEEES-CCCCTTCCSHHHHHCSSCSSCCH--HHHHHHHHHHHCTTCC
T ss_pred heEEE--ecCchHHHHHHHHHHHhhcCCCCeeEEEEEC-CccCCCcCchhHHHhccCCCCCH--HHHHHHHHHhCCCCcc
Confidence 45565 77765 567777777766 489898875 443221111111100 0000000 0000001111110000
Q ss_pred ccccccccccccccccccCCchhHHHHHHHhcchhhhhHhhhcCcCCCCCCCcEEEEEeCCCCCCC--cchHHHHHhcCC
Q 022534 183 YVLKLDKADVYRLPYLASSGPGFALLEAARKVNFKDISSRIGAGFSSGSWDKPVLVAWGISDKYLP--QSVAEEFQKGNP 260 (295)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~~--~~~~~~~~~~~~ 260 (295)
. . . .. ...++ ...... ..+ .-.+|+++++|++|.+++ ....+.+.+...
T Consensus 228 ~-~--~-~~-~~~~~------------------~sp~~~---~~~---~~~~P~li~~G~~D~~~~~~~~~~~~l~~~g~ 278 (323)
T 1lzl_A 228 G-P--E-DP-DVSIY------------------AAPSRA---TDL---TGLPPTYLSTMELDPLRDEGIEYALRLLQAGV 278 (323)
T ss_dssp C-T--T-CS-CCCTT------------------TCGGGC---SCC---TTCCCEEEEEETTCTTHHHHHHHHHHHHHTTC
T ss_pred c-c--c-cc-CCCcc------------------cCcccC---ccc---CCCChhheEECCcCCchHHHHHHHHHHHHcCC
Confidence 0 0 0 00 00000 000000 000 113799999999999874 122344444333
Q ss_pred CCeEEEEecCCCCCCC----CCChHHHHHHHHHHHHh
Q 022534 261 NVVKLQMIEGAGHMPQ----EDWPEKVVDGLRYFFLN 293 (295)
Q Consensus 261 ~~~~~~~i~~~gH~~~----~e~p~~~~~~i~~fl~~ 293 (295)
.++++++++++|... .+.++++.+.+.+||..
T Consensus 279 -~~~~~~~~g~~H~~~~~~~~~~~~~~~~~i~~fl~~ 314 (323)
T 1lzl_A 279 -SVELHSFPGTFHGSALVATAAVSERGAAEALTAIRR 314 (323)
T ss_dssp -CEEEEEETTCCTTGGGSTTSHHHHHHHHHHHHHHHH
T ss_pred -CEEEEEeCcCccCcccCccCHHHHHHHHHHHHHHHH
Confidence 379999999999643 34478999999999976
|
| >3fle_A SE_1780 protein; structural genomics, APC61035.1, PSI-2, protein structure in midwest center for structural genomics, MCSG; 2.01A {Staphylococcus epidermidis} | Back alignment and structure |
|---|
Probab=99.75 E-value=4.1e-17 Score=137.12 Aligned_cols=206 Identities=15% Similarity=0.070 Sum_probs=128.1
Q ss_pred CceEEEEcCCCCCCccchhhHHHhhhCCC--eEEEeCCCCCCCCCCC--C------CC-----CCCCCCCHHHHHHHHHH
Q 022534 35 LGTIVFLHGAPSHSYSYRNVMSQMSDAGF--HCFAPDWLGFGFSDKP--E------KG-----YDDFDFTENEFHEELDK 99 (295)
Q Consensus 35 ~~~vv~lHG~~~~~~~w~~~~~~l~~~~~--~via~Dl~G~G~S~~~--~------~~-----~~~~~~~~~~~~~~l~~ 99 (295)
.+||||+||++++...|..+++.|++.|+ +|+.+|++++|.+.-. . +. .++.+.+...+++++.+
T Consensus 6 ~~pvvliHG~~~~~~~~~~l~~~L~~~g~~~~vi~~dv~~~G~~~~~G~~~~~~~~P~i~v~f~~n~~~~~~~~~~~l~~ 85 (249)
T 3fle_A 6 TTATLFLHGYGGSERSETFMVKQALNKNVTNEVITARVSSEGKVYFDKKLSEDAANPIVKVEFKDNKNGNFKENAYWIKE 85 (249)
T ss_dssp CEEEEEECCTTCCGGGTHHHHHHHHTTTSCSCEEEEEECSSCCEEESSCCC--CCSCEEEEEESSTTCCCHHHHHHHHHH
T ss_pred CCcEEEECCCCCChhHHHHHHHHHHHcCCCceEEEEEECCCCCEEEccccccccCCCeEEEEcCCCCCccHHHHHHHHHH
Confidence 46999999999999999999999998775 7999999999986311 0 00 00111233445566666
Q ss_pred HHHHh----CCCCceEEEEecccchH-HHHHHHHhCcC-----ccceeEEEcCCCCCCCCCchhhhhhhcccchhhhhhh
Q 022534 100 LLDVL----EVKYPFFLVVQGFLVGS-YGLTWALKNPS-----RISKLAILNSPLTASSPLPGLFQQLRIPLLGEFTAQN 169 (295)
Q Consensus 100 ~~~~l----~~~~~~~lv~~G~~~G~-~~~~~a~~~p~-----~v~~lil~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (295)
+++.+ ++++ +.+| |||+|+ +++.++.++|+ +|+++|++++|.......... +-...+.
T Consensus 86 ~i~~l~~~~~~~~-~~lv--GHSmGG~ia~~~~~~~~~~~~~~~v~~lv~i~~p~~g~~~~~~~------~~~~~~~--- 153 (249)
T 3fle_A 86 VLSQLKSQFGIQQ-FNFV--GHSMGNMSFAFYMKNYGDDRHLPQLKKEVNIAGVYNGILNMNEN------VNEIIVD--- 153 (249)
T ss_dssp HHHHHHHTTCCCE-EEEE--EETHHHHHHHHHHHHHSSCSSSCEEEEEEEESCCTTCCTTTSSC------TTTSCBC---
T ss_pred HHHHHHHHhCCCc-eEEE--EECccHHHHHHHHHHCcccccccccceEEEeCCccCCcccccCC------cchhhhc---
Confidence 55544 6664 6676 777765 57788888874 799999998887543210000 0000000
Q ss_pred HHHHHHHHHhCCCccccccccccccccccccCCchhHHHHHHHhcchhhhhHhhhcCcCCCCCCCcEEEEEeC------C
Q 022534 170 AIMAERFIEAGSPYVLKLDKADVYRLPYLASSGPGFALLEAARKVNFKDISSRIGAGFSSGSWDKPVLVAWGI------S 243 (295)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~------~ 243 (295)
..+.|... . ..+..+ ......+. +.++|+|.|+|+ .
T Consensus 154 --------~~g~p~~~------------------~-~~~~~l-----~~~~~~~p------~~~~~vl~I~G~~~~~~~s 195 (249)
T 3fle_A 154 --------KQGKPSRM------------------N-AAYRQL-----LSLYKIYC------GKEIEVLNIYGDLEDGSHS 195 (249)
T ss_dssp --------TTCCBSSC------------------C-HHHHHT-----GGGHHHHT------TTTCEEEEEEEECCSSSCB
T ss_pred --------ccCCCccc------------------C-HHHHHH-----HHHHhhCC------ccCCeEEEEeccCCCCCCC
Confidence 00000000 0 011111 01122221 247999999998 6
Q ss_pred CCCCCcchHHHHHhcCCC---CeEEEEecC--CCCCCCCCChHHHHHHHHHHH
Q 022534 244 DKYLPQSVAEEFQKGNPN---VVKLQMIEG--AGHMPQEDWPEKVVDGLRYFF 291 (295)
Q Consensus 244 D~~~~~~~~~~~~~~~~~---~~~~~~i~~--~gH~~~~e~p~~~~~~i~~fl 291 (295)
|.+++.+.+..++..+++ .-+.+++.| +.|....++| ++.+.|..||
T Consensus 196 DG~V~~~Sa~~~~~l~~~~~~~y~e~~v~g~~a~Hs~l~~n~-~V~~~I~~FL 247 (249)
T 3fle_A 196 DGRVSNSSSQSLQYLLRGSTKSYQEMKFKGAKAQHSQLHENK-DVANEIIQFL 247 (249)
T ss_dssp SSSSBHHHHHTHHHHSTTCSSEEEEEEEESGGGSTGGGGGCH-HHHHHHHHHH
T ss_pred CCcccHHHHHHHHHHHhhCCCceEEEEEeCCCCchhccccCH-HHHHHHHHHh
Confidence 999999888766555543 224466655 9999988887 7889999997
|
| >2zsh_A Probable gibberellin receptor GID1L1; plant hormone receptor, gibberellin, gibberellin signaling pathway, hydrolase, nucleus, receptor, developmental protein; HET: GA3; 1.80A {Arabidopsis thaliana} PDB: 2zsi_A* | Back alignment and structure |
|---|
Probab=99.75 E-value=3.8e-17 Score=144.31 Aligned_cols=215 Identities=17% Similarity=0.088 Sum_probs=121.6
Q ss_pred CCceEEEEcCCCC---CCcc--chhhHHHhh-hCCCeEEEeCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH----
Q 022534 34 RLGTIVFLHGAPS---HSYS--YRNVMSQMS-DAGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEELDKLLDV---- 103 (295)
Q Consensus 34 ~~~~vv~lHG~~~---~~~~--w~~~~~~l~-~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~l~~~~~~---- 103 (295)
+.|+||++||++. +... |..++..|+ +.||.|+++|+||++.+..+. ..++..+.+..+.+.
T Consensus 112 ~~p~vv~~HGgg~~~g~~~~~~~~~~~~~la~~~g~~vv~~d~rg~~~~~~~~--------~~~D~~~~~~~l~~~~~~~ 183 (351)
T 2zsh_A 112 IVPVILFFHGGSFAHSSANSAIYDTLCRRLVGLCKCVVVSVNYRRAPENPYPC--------AYDDGWIALNWVNSRSWLK 183 (351)
T ss_dssp SCEEEEEECCSTTTSCCTTBHHHHHHHHHHHHHHTSEEEEECCCCTTTSCTTH--------HHHHHHHHHHHHHTCGGGC
T ss_pred CceEEEEECCCcCcCCCCcchhHHHHHHHHHHHcCCEEEEecCCCCCCCCCch--------hHHHHHHHHHHHHhCchhh
Confidence 4689999999653 3333 888889998 569999999999987654321 234555555555442
Q ss_pred --hCCCCceEEEEecccch-HHHHHHHHhCcC---ccceeEEEcCCCCCC-CCCchhhhhhhcccchhhhhhhHHHHHHH
Q 022534 104 --LEVKYPFFLVVQGFLVG-SYGLTWALKNPS---RISKLAILNSPLTAS-SPLPGLFQQLRIPLLGEFTAQNAIMAERF 176 (295)
Q Consensus 104 --l~~~~~~~lv~~G~~~G-~~~~~~a~~~p~---~v~~lil~~~p~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (295)
++.+..++++ |||+| .+++.+|.++|+ +|+++++++ |.... ............++... .. ...+
T Consensus 184 ~~~d~~~~i~l~--G~S~GG~la~~~a~~~~~~~~~v~~~vl~~-p~~~~~~~~~~~~~~~~~~~~~~-----~~-~~~~ 254 (351)
T 2zsh_A 184 SKKDSKVHIFLA--GDSSGGNIAHNVALRAGESGIDVLGNILLN-PMFGGNERTESEKSLDGKYFVTV-----RD-RDWY 254 (351)
T ss_dssp CTTTSSCEEEEE--EETHHHHHHHHHHHHHHTTTCCCCEEEEES-CCCCCSSCCHHHHHHTTTSSCCH-----HH-HHHH
T ss_pred cCCCCCCcEEEE--EeCcCHHHHHHHHHHhhccCCCeeEEEEEC-CccCCCcCChhhhhcCCCcccCH-----HH-HHHH
Confidence 1223046665 67765 578888888888 899999885 44322 11111000000011000 00 0001
Q ss_pred HHhCCCccccccccccccccccccCCchhHHHHHHHhcchhhhhHhhhcCcCCCCCCC-cEEEEEeCCCCCCCcc--hHH
Q 022534 177 IEAGSPYVLKLDKADVYRLPYLASSGPGFALLEAARKVNFKDISSRIGAGFSSGSWDK-PVLVAWGISDKYLPQS--VAE 253 (295)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-P~l~i~G~~D~~~~~~--~~~ 253 (295)
.....+.... .+ .+.. ..+... ... ..++++ |+|+++|++|.+++.. ..+
T Consensus 255 ~~~~~~~~~~---~~---~~~~---------------~~~~~~----~~~--l~~i~~pP~Lii~G~~D~~~~~~~~~~~ 307 (351)
T 2zsh_A 255 WKAFLPEGED---RE---HPAC---------------NPFSPR----GKS--LEGVSFPKSLVVVAGLDLIRDWQLAYAE 307 (351)
T ss_dssp HHHHSCTTCC---TT---STTT---------------CTTSTT----SCC--CTTCCCCEEEEEEETTSTTHHHHHHHHH
T ss_pred HHHhCCCCCC---CC---Cccc---------------CCCCCC----ccc--hhhCCCCCEEEEEcCCCcchHHHHHHHH
Confidence 0000000000 00 0000 000000 000 124466 9999999999987522 233
Q ss_pred HHHhcCCCCeEEEEecCCCCCCCC----CChHHHHHHHHHHHHh
Q 022534 254 EFQKGNPNVVKLQMIEGAGHMPQE----DWPEKVVDGLRYFFLN 293 (295)
Q Consensus 254 ~~~~~~~~~~~~~~i~~~gH~~~~----e~p~~~~~~i~~fl~~ 293 (295)
.+.+... .+++++++++||..+. |+++++.+.|.+||..
T Consensus 308 ~l~~~g~-~~~~~~~~g~gH~~~~~~~~~~~~~~~~~i~~Fl~~ 350 (351)
T 2zsh_A 308 GLKKAGQ-EVKLMHLEKATVGFYLLPNNNHFHNVMDEISAFVNA 350 (351)
T ss_dssp HHHHTTC-CEEEEEETTCCTTTTSSSCSHHHHHHHHHHHHHHHC
T ss_pred HHHHcCC-CEEEEEECCCcEEEEecCCCHHHHHHHHHHHHHhcC
Confidence 4443333 4899999999998877 7899999999999974
|
| >3ain_A 303AA long hypothetical esterase; carboxylesterase, thermophilic, dimer, archaea, R267G, hydro; 1.65A {Sulfolobus tokodaii} PDB: 3aio_A 3ail_A 3aik_A 3aim_A | Back alignment and structure |
|---|
Probab=99.75 E-value=1.8e-16 Score=138.56 Aligned_cols=222 Identities=13% Similarity=0.073 Sum_probs=125.5
Q ss_pred EEEEEEcCCC-CCCCceEEEEcCC---CCCCccchhhHHHhhhC-CCeEEEeCCCCCCCCCCCCCCCCCCCCCHHHHHHH
Q 022534 22 RWFVRETGSA-DSRLGTIVFLHGA---PSHSYSYRNVMSQMSDA-GFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEE 96 (295)
Q Consensus 22 ~~~~~~~g~~-~~~~~~vv~lHG~---~~~~~~w~~~~~~l~~~-~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~ 96 (295)
.+.+..+.+. ..+.|+|||+||+ .++...|..++..|++. ||+|+++|+||+|.|..+. ..++..+.
T Consensus 76 ~i~~~iy~P~~~~~~p~vv~~HGGg~~~g~~~~~~~~~~~La~~~g~~Vv~~Dyrg~~~~~~p~--------~~~d~~~~ 147 (323)
T 3ain_A 76 NIKARVYYPKTQGPYGVLVYYHGGGFVLGDIESYDPLCRAITNSCQCVTISVDYRLAPENKFPA--------AVVDSFDA 147 (323)
T ss_dssp EEEEEEEECSSCSCCCEEEEECCSTTTSCCTTTTHHHHHHHHHHHTSEEEEECCCCTTTSCTTH--------HHHHHHHH
T ss_pred eEEEEEEecCCCCCCcEEEEECCCccccCChHHHHHHHHHHHHhcCCEEEEecCCCCCCCCCcc--------hHHHHHHH
Confidence 4555444322 2346899999994 47888999999999853 8999999999999876432 23444445
Q ss_pred HHHHHHHh----CCCCceEEEEecccch-HHHHHHHHhCcCcc---ceeEEEcCCCCCCCCCchhhhhh-hcccchhhhh
Q 022534 97 LDKLLDVL----EVKYPFFLVVQGFLVG-SYGLTWALKNPSRI---SKLAILNSPLTASSPLPGLFQQL-RIPLLGEFTA 167 (295)
Q Consensus 97 l~~~~~~l----~~~~~~~lv~~G~~~G-~~~~~~a~~~p~~v---~~lil~~~p~~~~~~~~~~~~~~-~~~~~~~~~~ 167 (295)
+..+.+.. +.+ .++++ |+|+| .+++.+|.++|+++ +++++++ |.............. ..+.+ .
T Consensus 148 ~~~l~~~~~~lgd~~-~i~l~--G~S~GG~lA~~~a~~~~~~~~~~~~~vl~~-p~~~~~~~~~~~~~~~~~~~l----~ 219 (323)
T 3ain_A 148 LKWVYNNSEKFNGKY-GIAVG--GDSAGGNLAAVTAILSKKENIKLKYQVLIY-PAVSFDLITKSLYDNGEGFFL----T 219 (323)
T ss_dssp HHHHHHTGGGGTCTT-CEEEE--EETHHHHHHHHHHHHHHHTTCCCSEEEEES-CCCSCCSCCHHHHHHSSSSSS----C
T ss_pred HHHHHHhHHHhCCCc-eEEEE--ecCchHHHHHHHHHHhhhcCCCceeEEEEe-ccccCCCCCccHHHhccCCCC----C
Confidence 54444433 233 46665 77765 57888888888876 7888775 443221111111100 00000 0
Q ss_pred hhHHHHHHHHHhCCCccccccccccccccccccCCchhHHHHHHHhcchhhhhHhhhcCcCCCCCCCcEEEEEeCCCCCC
Q 022534 168 QNAIMAERFIEAGSPYVLKLDKADVYRLPYLASSGPGFALLEAARKVNFKDISSRIGAGFSSGSWDKPVLVAWGISDKYL 247 (295)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~ 247 (295)
. .. ...+...... .. .+.. .++ ..... .. ...+ .|+|+++|++|+++
T Consensus 220 ~-~~-~~~~~~~~~~---~~--~~~~-~~~------------------~sp~~----~~--l~~l-~P~lii~G~~D~l~ 266 (323)
T 3ain_A 220 R-EH-IDWFGQQYLR---SF--ADLL-DFR------------------FSPIL----AD--LNDL-PPALIITAEHDPLR 266 (323)
T ss_dssp H-HH-HHHHHHHHCS---SG--GGGG-CTT------------------TCGGG----SC--CTTC-CCEEEEEETTCTTH
T ss_pred H-HH-HHHHHHHhCC---CC--cccC-Ccc------------------cCccc----Cc--ccCC-CHHHEEECCCCccH
Confidence 0 00 0001100000 00 0000 000 00000 00 0122 49999999999987
Q ss_pred C--cchHHHHHhcCCCCeEEEEecCCCCCCCC-----CChHHHHHHHHHHHHh
Q 022534 248 P--QSVAEEFQKGNPNVVKLQMIEGAGHMPQE-----DWPEKVVDGLRYFFLN 293 (295)
Q Consensus 248 ~--~~~~~~~~~~~~~~~~~~~i~~~gH~~~~-----e~p~~~~~~i~~fl~~ 293 (295)
+ ...++.+.+... .++++++++++|..+. ++++++.+.+.+||..
T Consensus 267 ~~~~~~a~~l~~ag~-~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~i~~fl~~ 318 (323)
T 3ain_A 267 DQGEAYANKLLQSGV-QVTSVGFNNVIHGFVSFFPFIEQGRDAIGLIGYVLRK 318 (323)
T ss_dssp HHHHHHHHHHHHTTC-CEEEEEETTCCTTGGGGTTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCC-CEEEEEECCCccccccccCcCHHHHHHHHHHHHHHHH
Confidence 4 222344444333 3799999999998765 4568999999999975
|
| >3k6k_A Esterase/lipase; alpha/beta hydrolase fold; 2.20A {Uncultured bacterium} PDB: 3dnm_A | Back alignment and structure |
|---|
Probab=99.74 E-value=2.3e-16 Score=137.66 Aligned_cols=225 Identities=13% Similarity=0.130 Sum_probs=130.4
Q ss_pred eeEEeCcEEEEEEEcCCCCCCCce-EEEEcCCC---CCCccchhhHHHhhhC-CCeEEEeCCCCCCCCCCCCCCCCCCCC
Q 022534 14 SYIKSGEYRWFVRETGSADSRLGT-IVFLHGAP---SHSYSYRNVMSQMSDA-GFHCFAPDWLGFGFSDKPEKGYDDFDF 88 (295)
Q Consensus 14 ~~~~~~~~~~~~~~~g~~~~~~~~-vv~lHG~~---~~~~~w~~~~~~l~~~-~~~via~Dl~G~G~S~~~~~~~~~~~~ 88 (295)
..++.+|+.+ |...+.+ +.++ ||++||++ ++...|..++..|+++ ||.|+++|+||++.+..+.
T Consensus 61 ~~~~~~g~~~-~~p~~~~--~~~~~vv~~HGgg~~~g~~~~~~~~~~~la~~~g~~v~~~dyr~~~~~~~~~-------- 129 (322)
T 3k6k_A 61 TLTDLGGVPC-IRQATDG--AGAAHILYFHGGGYISGSPSTHLVLTTQLAKQSSATLWSLDYRLAPENPFPA-------- 129 (322)
T ss_dssp EEEEETTEEE-EEEECTT--CCSCEEEEECCSTTTSCCHHHHHHHHHHHHHHHTCEEEEECCCCTTTSCTTH--------
T ss_pred EEEEECCEeE-EecCCCC--CCCeEEEEEcCCcccCCChHHHHHHHHHHHHhcCCEEEEeeCCCCCCCCCch--------
Confidence 3456688888 5444432 2456 99999966 7778899999998754 9999999999988665321
Q ss_pred CHHHHHHHHHHHHHH-hCCCCceEEEEecccch-HHHHHHHHhCcCc----cceeEEEcCCCCCCCCCchhhhhh-h-cc
Q 022534 89 TENEFHEELDKLLDV-LEVKYPFFLVVQGFLVG-SYGLTWALKNPSR----ISKLAILNSPLTASSPLPGLFQQL-R-IP 160 (295)
Q Consensus 89 ~~~~~~~~l~~~~~~-l~~~~~~~lv~~G~~~G-~~~~~~a~~~p~~----v~~lil~~~p~~~~~~~~~~~~~~-~-~~ 160 (295)
.+++....+..+.+. ++.+ .++++ |+|+| .+++.+|+.+|++ ++++++++ |.............. . .+
T Consensus 130 ~~~d~~~a~~~l~~~~~~~~-~i~l~--G~S~GG~la~~~a~~~~~~~~~~~~~~vl~~-p~~~~~~~~~~~~~~~~~~~ 205 (322)
T 3k6k_A 130 AVDDCVAAYRALLKTAGSAD-RIIIA--GDSAGGGLTTASMLKAKEDGLPMPAGLVMLS-PFVDLTLSRWSNSNLADRDF 205 (322)
T ss_dssp HHHHHHHHHHHHHHHHSSGG-GEEEE--EETHHHHHHHHHHHHHHHTTCCCCSEEEEES-CCCCTTCCSHHHHHTGGGCS
T ss_pred HHHHHHHHHHHHHHcCCCCc-cEEEE--ecCccHHHHHHHHHHHHhcCCCCceEEEEec-CCcCcccCccchhhccCCCC
Confidence 345666666666665 3334 46665 67765 5777888877765 89998885 443221111111100 0 00
Q ss_pred cchhhhhhhHHHHHHHHHhCCCccccccccccccccccccCCchhHHHHHHHhcchhhhhHhhhcCcCCCCCCCcEEEEE
Q 022534 161 LLGEFTAQNAIMAERFIEAGSPYVLKLDKADVYRLPYLASSGPGFALLEAARKVNFKDISSRIGAGFSSGSWDKPVLVAW 240 (295)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~ 240 (295)
.+... ........+... .. ..+ +. ...... ..+-..|+|+++
T Consensus 206 ~~~~~--~~~~~~~~~~~~-~~------~~~----~~------------------~sp~~~-------~~~~~pP~li~~ 247 (322)
T 3k6k_A 206 LAEPD--TLGEMSELYVGG-ED------RKN----PL------------------ISPVYA-------DLSGLPEMLIHV 247 (322)
T ss_dssp SSCHH--HHHHHHHHHHTT-SC------TTC----TT------------------TCGGGS-------CCTTCCCEEEEE
T ss_pred cCCHH--HHHHHHHHhcCC-CC------CCC----Cc------------------CCcccc-------cccCCCcEEEEE
Confidence 00000 000001111100 00 000 00 000000 002246999999
Q ss_pred eCCCCCCCcchHHHHHhc---CCCCeEEEEecCCCCCCC-----CCChHHHHHHHHHHHHh
Q 022534 241 GISDKYLPQSVAEEFQKG---NPNVVKLQMIEGAGHMPQ-----EDWPEKVVDGLRYFFLN 293 (295)
Q Consensus 241 G~~D~~~~~~~~~~~~~~---~~~~~~~~~i~~~gH~~~-----~e~p~~~~~~i~~fl~~ 293 (295)
|++|.+++ .+..+++. ....++++++|+++|..+ +++++++.+.+.+||.+
T Consensus 248 G~~D~~~~--~~~~~~~~l~~~g~~~~l~~~~g~~H~~~~~~~~~~~~~~~~~~i~~fl~~ 306 (322)
T 3k6k_A 248 GSEEALLS--DSTTLAERAGAAGVSVELKIWPDMPHVFQMYGKFVNAADISIKEICHWISA 306 (322)
T ss_dssp ESSCTTHH--HHHHHHHHHHHTTCCEEEEEETTCCTTGGGGTTTCHHHHHHHHHHHHHHHT
T ss_pred CCcCccHH--HHHHHHHHHHHCCCCEEEEEECCCccccccccccChHHHHHHHHHHHHHHH
Confidence 99998743 33443322 222479999999999764 35578999999999976
|
| >1ei9_A Palmitoyl protein thioesterase 1; alpha/beta hydrolase, glycoprotein, hydrolase; HET: NDG NAG; 2.25A {Bos taurus} SCOP: c.69.1.13 PDB: 1eh5_A* 1exw_A* 3gro_A | Back alignment and structure |
|---|
Probab=99.74 E-value=5.3e-18 Score=145.23 Aligned_cols=104 Identities=17% Similarity=0.243 Sum_probs=77.1
Q ss_pred ceEEEEcCCCCCC---ccchhhHHHhhhC--CCeEEEeCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhC-CCCc
Q 022534 36 GTIVFLHGAPSHS---YSYRNVMSQMSDA--GFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEELDKLLDVLE-VKYP 109 (295)
Q Consensus 36 ~~vv~lHG~~~~~---~~w~~~~~~l~~~--~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~l~~~~~~l~-~~~~ 109 (295)
+||||+||++++. ..|..+++.|++. |++|+++|+ |||.|+.+... +.+++.+.++++.+.++.+. +.++
T Consensus 6 ~pvVllHG~~~~~~~~~~~~~~~~~L~~~~~g~~v~~~d~-G~g~s~~~~~~---~~~~~~~~~~~~~~~l~~~~~l~~~ 81 (279)
T 1ei9_A 6 LPLVIWHGMGDSCCNPLSMGAIKKMVEKKIPGIHVLSLEI-GKTLREDVENS---FFLNVNSQVTTVCQILAKDPKLQQG 81 (279)
T ss_dssp CCEEEECCTTCCSCCTTTTHHHHHHHHHHSTTCCEEECCC-SSSHHHHHHHH---HHSCHHHHHHHHHHHHHSCGGGTTC
T ss_pred CcEEEECCCCCCCCCcccHHHHHHHHHHHCCCcEEEEEEe-CCCCccccccc---cccCHHHHHHHHHHHHHhhhhccCC
Confidence 5799999999888 7899999999864 669999998 99998632111 12345566666666666432 2245
Q ss_pred eEEEEecccchH-HHHHHHHhCcCc-cceeEEEcCCCC
Q 022534 110 FFLVVQGFLVGS-YGLTWALKNPSR-ISKLAILNSPLT 145 (295)
Q Consensus 110 ~~lv~~G~~~G~-~~~~~a~~~p~~-v~~lil~~~p~~ 145 (295)
+++| |||+|+ ++..+|.++|++ |+++|++++|..
T Consensus 82 ~~lv--GhSmGG~ia~~~a~~~~~~~v~~lv~~~~p~~ 117 (279)
T 1ei9_A 82 YNAM--GFSQGGQFLRAVAQRCPSPPMVNLISVGGQHQ 117 (279)
T ss_dssp EEEE--EETTHHHHHHHHHHHCCSSCEEEEEEESCCTT
T ss_pred EEEE--EECHHHHHHHHHHHHcCCcccceEEEecCccC
Confidence 7787 777765 678889999994 999999987654
|
| >2cb9_A Fengycin synthetase; thioesterase, non-ribosomal peptide synthesis, alpha/beta- hydrolases, catalytic triade, hydrolase; 1.8A {Bacillus subtilis} PDB: 2cbg_A* | Back alignment and structure |
|---|
Probab=99.73 E-value=1.1e-16 Score=134.40 Aligned_cols=195 Identities=9% Similarity=0.091 Sum_probs=121.3
Q ss_pred CceEEEEcCCCCCCccchhhHHHhhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCceEEEE
Q 022534 35 LGTIVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEELDKLLDVLEVKYPFFLVV 114 (295)
Q Consensus 35 ~~~vv~lHG~~~~~~~w~~~~~~l~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~~lv~ 114 (295)
.++|+|+||++++...|..+++.|.. +|+|+++|+||++ ++++++.++++.+....+++++
T Consensus 22 ~~~l~~~hg~~~~~~~~~~~~~~l~~-~~~v~~~d~~g~~-----------------~~~~~~~~~i~~~~~~~~~~l~- 82 (244)
T 2cb9_A 22 GKNLFCFPPISGFGIYFKDLALQLNH-KAAVYGFHFIEED-----------------SRIEQYVSRITEIQPEGPYVLL- 82 (244)
T ss_dssp SSEEEEECCTTCCGGGGHHHHHHTTT-TSEEEEECCCCST-----------------THHHHHHHHHHHHCSSSCEEEE-
T ss_pred CCCEEEECCCCCCHHHHHHHHHHhCC-CceEEEEcCCCHH-----------------HHHHHHHHHHHHhCCCCCEEEE-
Confidence 46899999999999999999999975 7999999999863 1345666777776544567777
Q ss_pred ecccch-HHHHHHHHhC---cCccceeEEEcCCCCCCCCCchhhhhhhcccchhhhhhhHHHHHHHHHhCCCcccccccc
Q 022534 115 QGFLVG-SYGLTWALKN---PSRISKLAILNSPLTASSPLPGLFQQLRIPLLGEFTAQNAIMAERFIEAGSPYVLKLDKA 190 (295)
Q Consensus 115 ~G~~~G-~~~~~~a~~~---p~~v~~lil~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (295)
|||+| .++..+|.+. ++++.++++++++.... .+..... ...+..+. ...+...+.
T Consensus 83 -GhS~Gg~va~~~a~~~~~~~~~v~~lvl~~~~~~~~-~~~~~~~---~~~~~~~~--~~~~~~~~~------------- 142 (244)
T 2cb9_A 83 -GYSAGGNLAFEVVQAMEQKGLEVSDFIIVDAYKKDQ-SITADTE---NDDSAAYL--PEAVRETVM------------- 142 (244)
T ss_dssp -EETHHHHHHHHHHHHHHHTTCCEEEEEEESCCCCCS-CCCCC----------CCS--CHHHHHHHT-------------
T ss_pred -EECHhHHHHHHHHHHHHHcCCCccEEEEEcCCCCcc-ccccccc---HHHHHHHh--HHHHHHHHH-------------
Confidence 67776 4677777654 67899999987543211 0000000 00000000 000000000
Q ss_pred ccccccccccCCchhHHHHHHHhcchhhhhHhhhcCcCCCCCCCcEEEEEeC--CCCCCCcchHHHHHhcCCCCeEEEEe
Q 022534 191 DVYRLPYLASSGPGFALLEAARKVNFKDISSRIGAGFSSGSWDKPVLVAWGI--SDKYLPQSVAEEFQKGNPNVVKLQMI 268 (295)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~--~D~~~~~~~~~~~~~~~~~~~~~~~i 268 (295)
...... ..... .......+++|+++++|+ +|.+ +++....+.+..+.+++++++
T Consensus 143 ---------------~~~~~~-----~~~~~---~~~~~~~i~~Pvl~i~g~~~~D~~-~~~~~~~w~~~~~~~~~~~~i 198 (244)
T 2cb9_A 143 ---------------QKKRCY-----QEYWA---QLINEGRIKSNIHFIEAGIQTETS-GAMVLQKWQDAAEEGYAEYTG 198 (244)
T ss_dssp ---------------HHHHHH-----HHHHH---HCCCCSCBSSEEEEEECSBCSCCC-HHHHTTSSGGGBSSCEEEEEC
T ss_pred ---------------HHHHHH-----HHHHH---hhccCCCcCCCEEEEEccCccccc-cccchhHHHHhcCCCCEEEEe
Confidence 000000 00000 001123678999999999 8874 333334455555545899999
Q ss_pred cCCCC--CCCCCChHHHHHHHHHHHHh
Q 022534 269 EGAGH--MPQEDWPEKVVDGLRYFFLN 293 (295)
Q Consensus 269 ~~~gH--~~~~e~p~~~~~~i~~fl~~ 293 (295)
++ || +++.|+|+++++.|.+||.+
T Consensus 199 ~g-gH~~~~~~~~~~~~~~~i~~~L~~ 224 (244)
T 2cb9_A 199 YG-AHKDMLEGEFAEKNANIILNILDK 224 (244)
T ss_dssp SS-BGGGTTSHHHHHHHHHHHHHHHHT
T ss_pred cC-ChHHHcChHHHHHHHHHHHHHHhc
Confidence 96 99 77778899999999999975
|
| >1jkm_A Brefeldin A esterase; serine hydrolase, degradation of brefeldin A, alpha/beta hydrolase family; 1.85A {Bacillus subtilis} SCOP: c.69.1.2 | Back alignment and structure |
|---|
Probab=99.73 E-value=3.2e-17 Score=145.51 Aligned_cols=223 Identities=14% Similarity=0.059 Sum_probs=122.4
Q ss_pred CCceEEEEcCCC---CCCc--cchhhHHHhhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCCHHHH---HHHHHHHHHHhC
Q 022534 34 RLGTIVFLHGAP---SHSY--SYRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEF---HEELDKLLDVLE 105 (295)
Q Consensus 34 ~~~~vv~lHG~~---~~~~--~w~~~~~~l~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~---~~~l~~~~~~l~ 105 (295)
+.|+||++||++ ++.. .|..+...|++.||.|+++|+||+|.|+... . +...+.++ .+.+.+.++.++
T Consensus 108 ~~p~vv~iHGgg~~~g~~~~~~~~~~~~~la~~g~~vv~~d~r~~gg~~~~~-~---~~~~~~D~~~~~~~v~~~~~~~~ 183 (361)
T 1jkm_A 108 VLPGLVYTHGGGMTILTTDNRVHRRWCTDLAAAGSVVVMVDFRNAWTAEGHH-P---FPSGVEDCLAAVLWVDEHRESLG 183 (361)
T ss_dssp CEEEEEEECCSTTTSSCSSSHHHHHHHHHHHHTTCEEEEEECCCSEETTEEC-C---TTHHHHHHHHHHHHHHHTHHHHT
T ss_pred CCeEEEEEcCCccccCCCcccchhHHHHHHHhCCCEEEEEecCCCCCCCCCC-C---CCccHHHHHHHHHHHHhhHHhcC
Confidence 358999999987 7777 7888899998779999999999998775211 1 12223444 344444445556
Q ss_pred CCCceEEEEecccch-HHHHHHHHh-----CcCccceeEEEcCCCCCCCCCchhhhhhhcccchhhh--hhhHHHHHHHH
Q 022534 106 VKYPFFLVVQGFLVG-SYGLTWALK-----NPSRISKLAILNSPLTASSPLPGLFQQLRIPLLGEFT--AQNAIMAERFI 177 (295)
Q Consensus 106 ~~~~~~lv~~G~~~G-~~~~~~a~~-----~p~~v~~lil~~~p~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~ 177 (295)
.+ .++++ |+|+| .+++.++.. +|++++++|++++.................+...... .........+.
T Consensus 184 ~~-~i~l~--G~S~Gg~~a~~~a~~~~~~~~p~~i~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (361)
T 1jkm_A 184 LS-GVVVQ--GESGGGNLAIATTLLAKRRGRLDAIDGVYASIPYISGGYAWDHERRLTELPSLVENDGYFIENGGMALLV 260 (361)
T ss_dssp EE-EEEEE--EETHHHHHHHHHHHHHHHTTCGGGCSEEEEESCCCCCCTTSCHHHHHHHCTHHHHTTTSSSCHHHHHHHH
T ss_pred CC-eEEEE--EECHHHHHHHHHHHHHHhcCCCcCcceEEEECCccccccccccccccccCcchhhccCcccCHHHHHHHH
Confidence 66 46666 67765 467777776 8889999999864433211111000000000000000 00000000000
Q ss_pred HhCCCccccccccccccccccccCCchhHHHHHHHhcchhhhhHhhhcCcCCCCCCCcEEEEEeCCCCCCCcchHHHHHh
Q 022534 178 EAGSPYVLKLDKADVYRLPYLASSGPGFALLEAARKVNFKDISSRIGAGFSSGSWDKPVLVAWGISDKYLPQSVAEEFQK 257 (295)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~ 257 (295)
..... .. ... ..++. .........+ ..+. |+|+++|++|.+++ .+..+++
T Consensus 261 ~~~~~----~~-~~~-~~~~~---------------~p~~~~~~~l------~~l~-P~Lii~G~~D~~~~--~~~~~~~ 310 (361)
T 1jkm_A 261 RAYDP----TG-EHA-EDPIA---------------WPYFASEDEL------RGLP-PFVVAVNELDPLRD--EGIAFAR 310 (361)
T ss_dssp HHHSS----SS-TTT-TCTTT---------------CGGGCCHHHH------TTCC-CEEEEEETTCTTHH--HHHHHHH
T ss_pred HHhCC----CC-CCC-CCccc---------------CccccChhhH------cCCC-ceEEEEcCcCcchh--hHHHHHH
Confidence 00000 00 000 00000 0000000111 1344 99999999999886 3344433
Q ss_pred cC---CCCeEEEEecCCCCCCC-C-----CCh-HHHHHHHHHHHHh
Q 022534 258 GN---PNVVKLQMIEGAGHMPQ-E-----DWP-EKVVDGLRYFFLN 293 (295)
Q Consensus 258 ~~---~~~~~~~~i~~~gH~~~-~-----e~p-~~~~~~i~~fl~~ 293 (295)
.+ ...++++++++++|..+ . +++ +++.+.|.+||..
T Consensus 311 ~l~~~g~~~~l~~~~g~~H~~~~~~~~~~~~~~~~~~~~i~~fl~~ 356 (361)
T 1jkm_A 311 RLARAGVDVAARVNIGLVHGADVIFRHWLPAALESTVRDVAGFAAD 356 (361)
T ss_dssp HHHHTTCCEEEEEETTCCTTHHHHSGGGCHHHHHHHHHHHHHHHHH
T ss_pred HHHHcCCCEEEEEeCCCccCccccccccccHHHHHHHHHHHHHHHH
Confidence 32 22479999999999877 3 444 8899999999976
|
| >1jmk_C SRFTE, surfactin synthetase; thioesterase, non-ribosomal peptide synthesis, alpha-beta hydrolase, cyclic peptide; 1.71A {Bacillus subtilis} SCOP: c.69.1.22 | Back alignment and structure |
|---|
Probab=99.73 E-value=1.1e-16 Score=132.56 Aligned_cols=206 Identities=14% Similarity=0.122 Sum_probs=122.4
Q ss_pred CceEEEEcCCCCCCccchhhHHHhhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCceEEEE
Q 022534 35 LGTIVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEELDKLLDVLEVKYPFFLVV 114 (295)
Q Consensus 35 ~~~vv~lHG~~~~~~~w~~~~~~l~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~~lv~ 114 (295)
.++|+|+||++++...|..+++.|. . |+|+++|+||+|. .++++.++++.+....+++++
T Consensus 17 ~~~l~~~hg~~~~~~~~~~~~~~l~-~-~~v~~~d~~g~~~-----------------~~~~~~~~i~~~~~~~~~~l~- 76 (230)
T 1jmk_C 17 EQIIFAFPPVLGYGLMYQNLSSRLP-S-YKLCAFDFIEEED-----------------RLDRYADLIQKLQPEGPLTLF- 76 (230)
T ss_dssp SEEEEEECCTTCCGGGGHHHHHHCT-T-EEEEEECCCCSTT-----------------HHHHHHHHHHHHCCSSCEEEE-
T ss_pred CCCEEEECCCCCchHHHHHHHHhcC-C-CeEEEecCCCHHH-----------------HHHHHHHHHHHhCCCCCeEEE-
Confidence 4689999999999999999999997 4 9999999998762 234556666766655577777
Q ss_pred ecccch-HHHHHHHHhC---cCccceeEEEcCCCCCCCCCchhhhhhhcccchhhhhhhHHHHHHHHHhCCCcccccccc
Q 022534 115 QGFLVG-SYGLTWALKN---PSRISKLAILNSPLTASSPLPGLFQQLRIPLLGEFTAQNAIMAERFIEAGSPYVLKLDKA 190 (295)
Q Consensus 115 ~G~~~G-~~~~~~a~~~---p~~v~~lil~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (295)
|||+| .++..+|.+. +++++++++++++..... .. +.. .... .. ...+.... +....
T Consensus 77 -G~S~Gg~ia~~~a~~~~~~~~~v~~lvl~~~~~~~~~--~~-~~~--~~~~-~~-------~~~~~~~~-~~~~~---- 137 (230)
T 1jmk_C 77 -GYSAGCSLAFEAAKKLEGQGRIVQRIIMVDSYKKQGV--SD-LDG--RTVE-SD-------VEALMNVN-RDNEA---- 137 (230)
T ss_dssp -EETHHHHHHHHHHHHHHHTTCCEEEEEEESCCEECCC--C------------CC-------HHHHHHHT-TTCSG----
T ss_pred -EECHhHHHHHHHHHHHHHcCCCccEEEEECCCCCCcc--cc-ccc--ccHH-HH-------HHHHHhcC-hhhhh----
Confidence 67766 4677777654 468999999875432110 00 000 0000 00 00111100 00000
Q ss_pred ccccccccccCCchhHHHHHHHhcchhhhhHhhhcCcCCCCCCCcEEEEEeCCCCCCCcchHHHHHhcCCCCeEEEEecC
Q 022534 191 DVYRLPYLASSGPGFALLEAARKVNFKDISSRIGAGFSSGSWDKPVLVAWGISDKYLPQSVAEEFQKGNPNVVKLQMIEG 270 (295)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~ 270 (295)
.. .+... ..+..... ..............+++|+++++|++|..++. ....+.+..+..++++.+++
T Consensus 138 -~~-~~~~~-----~~~~~~~~-----~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~-~~~~w~~~~~~~~~~~~i~g 204 (230)
T 1jmk_C 138 -LN-SEAVK-----HGLKQKTH-----AFYSYYVNLISTGQVKADIDLLTSGADFDIPE-WLASWEEATTGAYRMKRGFG 204 (230)
T ss_dssp -GG-SHHHH-----HHHHHHHH-----HHHHHHHHCCCCSCBSSEEEEEECSSCCCCCT-TEECSGGGBSSCEEEEECSS
T ss_pred -hh-hHHHH-----HHHHHHHH-----HHHHHhhhccccccccccEEEEEeCCCCCCcc-ccchHHHhcCCCeEEEEecC
Confidence 00 00000 00000000 00000000012247899999999999998763 23344455544579999997
Q ss_pred CCC--CCCCCChHHHHHHHHHHHHh
Q 022534 271 AGH--MPQEDWPEKVVDGLRYFFLN 293 (295)
Q Consensus 271 ~gH--~~~~e~p~~~~~~i~~fl~~ 293 (295)
|| +++.++|+.+++.|.+||.+
T Consensus 205 -~H~~~~~~~~~~~~~~~i~~~l~~ 228 (230)
T 1jmk_C 205 -THAEMLQGETLDRNAGILLEFLNT 228 (230)
T ss_dssp -CGGGTTSHHHHHHHHHHHHHHHTC
T ss_pred -ChHHHcCcHhHHHHHHHHHHHHhh
Confidence 99 88888999999999999865
|
| >2hm7_A Carboxylesterase; alpha/beta hydrolase fold, hydrolase; 2.00A {Alicyclobacillus acidocaldarius} PDB: 1evq_A* 1u4n_A 1qz3_A | Back alignment and structure |
|---|
Probab=99.73 E-value=9.6e-17 Score=139.02 Aligned_cols=232 Identities=11% Similarity=0.077 Sum_probs=126.7
Q ss_pred eEEeCcEEEEEEEcCCCC--CCCceEEEEcC---CCCCCccchhhHHHhhhC-CCeEEEeCCCCCCCCCCCCCCCCCCCC
Q 022534 15 YIKSGEYRWFVRETGSAD--SRLGTIVFLHG---APSHSYSYRNVMSQMSDA-GFHCFAPDWLGFGFSDKPEKGYDDFDF 88 (295)
Q Consensus 15 ~~~~~~~~~~~~~~g~~~--~~~~~vv~lHG---~~~~~~~w~~~~~~l~~~-~~~via~Dl~G~G~S~~~~~~~~~~~~ 88 (295)
.+...+..+.+..+.+.. .+.|+||++|| ++++...|..++..|+++ ||+|+++|+||+|.+..+.
T Consensus 52 ~i~~~~g~l~~~~~~P~~~~~~~p~vv~~HGGg~~~g~~~~~~~~~~~la~~~g~~v~~~d~rg~~~~~~~~-------- 123 (310)
T 2hm7_A 52 DMDLPGRTLKVRMYRPEGVEPPYPALVYYHGGSWVVGDLETHDPVCRVLAKDGRAVVFSVDYRLAPEHKFPA-------- 123 (310)
T ss_dssp EEEETTEEEEEEEEECTTCCSSEEEEEEECCSTTTSCCTTTTHHHHHHHHHHHTSEEEEECCCCTTTSCTTH--------
T ss_pred EeccCCCeEEEEEEecCCCCCCCCEEEEECCCccccCChhHhHHHHHHHHHhcCCEEEEeCCCCCCCCCCCc--------
Confidence 344444466666554432 34589999999 778889999999999865 8999999999999875321
Q ss_pred CHHHHHHHHHHHHHH---hCCC-CceEEEEecccch-HHHHHHHHhCcC----ccceeEEEcCCCCCCC-CCchhhhhhh
Q 022534 89 TENEFHEELDKLLDV---LEVK-YPFFLVVQGFLVG-SYGLTWALKNPS----RISKLAILNSPLTASS-PLPGLFQQLR 158 (295)
Q Consensus 89 ~~~~~~~~l~~~~~~---l~~~-~~~~lv~~G~~~G-~~~~~~a~~~p~----~v~~lil~~~p~~~~~-~~~~~~~~~~ 158 (295)
..++....+..+.+. ++++ +++.++ |+|+| .+++.+|.++|+ ++++++++++...... ..........
T Consensus 124 ~~~d~~~~~~~l~~~~~~~~~~~~~i~l~--G~S~GG~la~~~a~~~~~~~~~~v~~~vl~~p~~~~~~~~~~~~~~~~~ 201 (310)
T 2hm7_A 124 AVEDAYDALQWIAERAADFHLDPARIAVG--GDSAGGNLAAVTSILAKERGGPALAFQLLIYPSTGYDPAHPPASIEENA 201 (310)
T ss_dssp HHHHHHHHHHHHHHTTGGGTEEEEEEEEE--EETHHHHHHHHHHHHHHHTTCCCCCCEEEESCCCCCCTTSCCHHHHHTS
T ss_pred cHHHHHHHHHHHHhhHHHhCCCcceEEEE--EECHHHHHHHHHHHHHHhcCCCCceEEEEEcCCcCCCcccCCcchhhcC
Confidence 122333333333322 2332 245565 77765 567788887776 6999998854332210 0000000000
Q ss_pred cccchhhhhhhHHHHHHHHHhCCCccccccccccccccccccCCchhHHHHHHHhcchhhhhHhhhcCcCCCCCCCcEEE
Q 022534 159 IPLLGEFTAQNAIMAERFIEAGSPYVLKLDKADVYRLPYLASSGPGFALLEAARKVNFKDISSRIGAGFSSGSWDKPVLV 238 (295)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~ 238 (295)
. ...... .. ...+...... ..... ..++ .... ....+ ..+ .|+|+
T Consensus 202 ~---~~~~~~-~~-~~~~~~~~~~-----~~~~~-~~~~------------------~~p~---~~~~l--~~~-~P~li 246 (310)
T 2hm7_A 202 E---GYLLTG-GM-MLWFRDQYLN-----SLEEL-THPW------------------FSPV---LYPDL--SGL-PPAYI 246 (310)
T ss_dssp S---SSSSCH-HH-HHHHHHHHCS-----SGGGG-GCTT------------------TCGG---GCSCC--TTC-CCEEE
T ss_pred C---CCCCCH-HH-HHHHHHHhCC-----CCCcc-CCcc------------------CCCC---cCccc--cCC-CCEEE
Confidence 0 000000 00 0000000000 00000 0000 0000 00000 122 39999
Q ss_pred EEeCCCCCCCcchHHHHHhcC---CCCeEEEEecCCCCCCC-----CCChHHHHHHHHHHHHh
Q 022534 239 AWGISDKYLPQSVAEEFQKGN---PNVVKLQMIEGAGHMPQ-----EDWPEKVVDGLRYFFLN 293 (295)
Q Consensus 239 i~G~~D~~~~~~~~~~~~~~~---~~~~~~~~i~~~gH~~~-----~e~p~~~~~~i~~fl~~ 293 (295)
++|++|.+++ .+..+++.+ ...++++++++++|... .++++++.+.+.+||..
T Consensus 247 i~G~~D~~~~--~~~~~~~~l~~~g~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~i~~fl~~ 307 (310)
T 2hm7_A 247 ATAQYDPLRD--VGKLYAEALNKAGVKVEIENFEDLIHGFAQFYSLSPGATKALVRIAEKLRD 307 (310)
T ss_dssp EEEEECTTHH--HHHHHHHHHHHTTCCEEEEEEEEEETTGGGGTTTCHHHHHHHHHHHHHHHH
T ss_pred EEecCCCchH--HHHHHHHHHHHCCCCEEEEEeCCCccchhhhcccChHHHHHHHHHHHHHHH
Confidence 9999999872 333333322 22379999999999554 46678999999999976
|
| >1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24 | Back alignment and structure |
|---|
Probab=99.72 E-value=6.7e-17 Score=155.22 Aligned_cols=218 Identities=13% Similarity=0.143 Sum_probs=131.1
Q ss_pred CcEEEEEEEcCCCC----CCCceEEEEcCCCCC---Cccch--hhHHHhhhCCCeEEEeCCCCCCCCCCC-----CCCCC
Q 022534 19 GEYRWFVRETGSAD----SRLGTIVFLHGAPSH---SYSYR--NVMSQMSDAGFHCFAPDWLGFGFSDKP-----EKGYD 84 (295)
Q Consensus 19 ~~~~~~~~~~g~~~----~~~~~vv~lHG~~~~---~~~w~--~~~~~l~~~~~~via~Dl~G~G~S~~~-----~~~~~ 84 (295)
+| .+++..+.+.. .+.|+||++||++++ ...|. .....|+++||.|+++|+||+|.+... ....
T Consensus 477 ~g-~l~~~~~~P~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~l~~~G~~vv~~d~rG~g~~g~~~~~~~~~~~- 554 (723)
T 1xfd_A 477 DY-NLPMQILKPATFTDTTHYPLLLVVDGTPGSQSVAEKFEVSWETVMVSSHGAVVVKCDGRGSGFQGTKLLHEVRRRL- 554 (723)
T ss_dssp TE-EECCBEEBCSSCCSSSCEEEEEECCCCTTCCCCCCCCCCSHHHHHHHTTCCEEECCCCTTCSSSHHHHHHTTTTCT-
T ss_pred Cc-eEEEEEEeCCCCCCCCccCEEEEEcCCCCccccCccccccHHHHHhhcCCEEEEEECCCCCccccHHHHHHHHhcc-
Confidence 45 77766554432 235789999999876 33454 555667767999999999999986321 1111
Q ss_pred CCCCCHHHHHHHHHHHHHHhCCC-CceEEEEecccchH-HHHHHHHhC----cCccceeEEEcCCCCCCCCCchhhhhhh
Q 022534 85 DFDFTENEFHEELDKLLDVLEVK-YPFFLVVQGFLVGS-YGLTWALKN----PSRISKLAILNSPLTASSPLPGLFQQLR 158 (295)
Q Consensus 85 ~~~~~~~~~~~~l~~~~~~l~~~-~~~~lv~~G~~~G~-~~~~~a~~~----p~~v~~lil~~~p~~~~~~~~~~~~~~~ 158 (295)
..+..+++.+.+..+.+.-.++ +.+.++ |||+|+ +++.+|.++ |++++++++++++.... ...
T Consensus 555 -~~~~~~d~~~~~~~l~~~~~~d~~~i~l~--G~S~GG~~a~~~a~~~~~~~p~~~~~~v~~~~~~~~~-~~~------- 623 (723)
T 1xfd_A 555 -GLLEEKDQMEAVRTMLKEQYIDRTRVAVF--GKDYGGYLSTYILPAKGENQGQTFTCGSALSPITDFK-LYA------- 623 (723)
T ss_dssp -TTHHHHHHHHHHHHHHSSSSEEEEEEEEE--EETHHHHHHHHCCCCSSSTTCCCCSEEEEESCCCCTT-SSB-------
T ss_pred -CcccHHHHHHHHHHHHhCCCcChhhEEEE--EECHHHHHHHHHHHhccccCCCeEEEEEEccCCcchH-Hhh-------
Confidence 0112344444444433321111 235555 777765 566777788 99999999875432211 000
Q ss_pred cccchhhhhhhHHHHHHHHHhCCCccccccccccccccccccCCchhHHHHHHHhcchhhhhHhhhcCcCCCCCC-CcEE
Q 022534 159 IPLLGEFTAQNAIMAERFIEAGSPYVLKLDKADVYRLPYLASSGPGFALLEAARKVNFKDISSRIGAGFSSGSWD-KPVL 237 (295)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~P~l 237 (295)
....+.++ +.+... ...+. . . .....+ .+++ +|+|
T Consensus 624 -----------~~~~~~~~--~~~~~~----~~~~~----~--------------~---~~~~~~------~~~~~~P~l 659 (723)
T 1xfd_A 624 -----------SAFSERYL--GLHGLD----NRAYE----M--------------T---KVAHRV------SALEEQQFL 659 (723)
T ss_dssp -----------HHHHHHHH--CCCSSC----CSSTT----T--------------T---CTHHHH------TSCCSCEEE
T ss_pred -----------hhccHhhc--CCccCC----hhHHH----h--------------c---ChhhHH------hhcCCCCEE
Confidence 00111121 111100 00000 0 0 001111 1567 8999
Q ss_pred EEEeCCCCCCCcchHHHHHhcCC---CCeEEEEecCCCCCC-CCCChHHHHHHHHHHHHh
Q 022534 238 VAWGISDKYLPQSVAEEFQKGNP---NVVKLQMIEGAGHMP-QEDWPEKVVDGLRYFFLN 293 (295)
Q Consensus 238 ~i~G~~D~~~~~~~~~~~~~~~~---~~~~~~~i~~~gH~~-~~e~p~~~~~~i~~fl~~ 293 (295)
+++|++|..++++.+.++++.+. ..++++++|++||.+ +.++++++.+.+.+||..
T Consensus 660 ii~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~ 719 (723)
T 1xfd_A 660 IIHPTADEKIHFQHTAELITQLIRGKANYSLQIYPDESHYFTSSSLKQHLYRSIINFFVE 719 (723)
T ss_dssp EEEETTCSSSCHHHHHHHHHHHHHTTCCCEEEEETTCCSSCCCHHHHHHHHHHHHHHHTT
T ss_pred EEEeCCCCCcCHhHHHHHHHHHHHCCCCeEEEEECCCCcccccCcchHHHHHHHHHHHHH
Confidence 99999999999888877765442 236999999999998 678899999999999976
|
| >3ds8_A LIN2722 protein; unkonwn function, structural genomics, PSI, MCSG, P structure initiative; 1.80A {Listeria innocua} | Back alignment and structure |
|---|
Probab=99.72 E-value=2.2e-16 Score=133.30 Aligned_cols=202 Identities=18% Similarity=0.219 Sum_probs=126.1
Q ss_pred ceEEEEcCCCCCCccchhhHHHhhhCCCeE----EEeCCCCCC------CCCCC--CC----CCCCCCCCHHHHHHHHH-
Q 022534 36 GTIVFLHGAPSHSYSYRNVMSQMSDAGFHC----FAPDWLGFG------FSDKP--EK----GYDDFDFTENEFHEELD- 98 (295)
Q Consensus 36 ~~vv~lHG~~~~~~~w~~~~~~l~~~~~~v----ia~Dl~G~G------~S~~~--~~----~~~~~~~~~~~~~~~l~- 98 (295)
+||||+||++++...|..+++.|++. +++ +++|..++| .+... .+ .+....++++.+++++.
T Consensus 4 ~pvvllHG~~~~~~~~~~l~~~L~~~-~~~~~~~~~~~v~~~G~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~a~~l~~ 82 (254)
T 3ds8_A 4 IPIILIHGSGGNASSLDKMADQLMNE-YRSSNEALTMTVNSEGKIKFEGKLTKDAKRPIIKFGFEQNQATPDDWSKWLKI 82 (254)
T ss_dssp CCEEEECCTTCCTTTTHHHHHHHHHT-TCCCCCEEEEEEETTTEEEEESCCCTTCSSCEEEEEESSTTSCHHHHHHHHHH
T ss_pred CCEEEECCCCCCcchHHHHHHHHHHh-cCCCceEEEEEEcCCCeEEEEEEeccCCCCCEEEEEecCCCCCHHHHHHHHHH
Confidence 58999999999999999999999875 443 333333333 22211 11 00012357788888884
Q ss_pred ---HHHHHhCCCCceEEEEecccchH-HHHHHHHhCcC-----ccceeEEEcCCCCCCCCCchhhhhhhcccchhhhhhh
Q 022534 99 ---KLLDVLEVKYPFFLVVQGFLVGS-YGLTWALKNPS-----RISKLAILNSPLTASSPLPGLFQQLRIPLLGEFTAQN 169 (295)
Q Consensus 99 ---~~~~~l~~~~~~~lv~~G~~~G~-~~~~~a~~~p~-----~v~~lil~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (295)
.+.+.++++ ++++| |||+|+ +++.++.++|+ +|+++|++++|..... . ...
T Consensus 83 ~i~~l~~~~~~~-~~~lv--GHS~Gg~ia~~~~~~~~~~~~~~~v~~lv~i~~p~~g~~---~-~~~------------- 142 (254)
T 3ds8_A 83 AMEDLKSRYGFT-QMDGV--GHSNGGLALTYYAEDYAGDKTVPTLRKLVAIGSPFNDLD---P-NDN------------- 142 (254)
T ss_dssp HHHHHHHHHCCS-EEEEE--EETHHHHHHHHHHHHSTTCTTSCEEEEEEEESCCTTCSC---H-HHH-------------
T ss_pred HHHHHHHHhCCC-ceEEE--EECccHHHHHHHHHHccCCccccceeeEEEEcCCcCccc---c-ccc-------------
Confidence 444555665 46777 777765 57788889998 8999999987664321 0 000
Q ss_pred HHHHHHHHHhCCCccccccccccccccccccCCchhHHHHHHHhcchhhhhHhhhcCcCCCCCCCcEEEEEeC------C
Q 022534 170 AIMAERFIEAGSPYVLKLDKADVYRLPYLASSGPGFALLEAARKVNFKDISSRIGAGFSSGSWDKPVLVAWGI------S 243 (295)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~------~ 243 (295)
... +.. . ..+.. ...+... ......+ .-++|++.|+|+ .
T Consensus 143 ----------~~~--~~~--~---~~p~~------~~~~~~~-----~~~~~~~-------~~~~~vl~I~G~~~~~~~~ 187 (254)
T 3ds8_A 143 ----------GMD--LSF--K---KLPNS------TPQMDYF-----IKNQTEV-------SPDLEVLAIAGELSEDNPT 187 (254)
T ss_dssp ----------CSC--TTC--S---SCSSC------CHHHHHH-----HHTGGGS-------CTTCEEEEEEEESBTTBCB
T ss_pred ----------ccc--ccc--c---cCCcc------hHHHHHH-----HHHHhhC-------CCCcEEEEEEecCCCCCCC
Confidence 000 000 0 00000 0111110 0111111 117999999999 9
Q ss_pred CCCCCcchHHHHHhcCCCC---eEEEEecC--CCCCCCCCChHHHHHHHHHHHHhc
Q 022534 244 DKYLPQSVAEEFQKGNPNV---VKLQMIEG--AGHMPQEDWPEKVVDGLRYFFLNY 294 (295)
Q Consensus 244 D~~~~~~~~~~~~~~~~~~---~~~~~i~~--~gH~~~~e~p~~~~~~i~~fl~~~ 294 (295)
|.++|.+.+..++..+++. .+..++.+ ++|..+.|+|+ +.+.|..||+.+
T Consensus 188 Dg~Vp~~ss~~l~~~~~~~~~~~~~~~~~g~~a~Hs~l~~~~~-v~~~i~~fL~~~ 242 (254)
T 3ds8_A 188 DGIVPTISSLATRLFMPGSAKAYIEDIQVGEDAVHQTLHETPK-SIEKTYWFLEKF 242 (254)
T ss_dssp CSSSBHHHHTGGGGTSBTTBSEEEEEEEESGGGCGGGGGGSHH-HHHHHHHHHHTC
T ss_pred CcEeeHHHHHHHHHHhhccCcceEEEEEeCCCCchhcccCCHH-HHHHHHHHHHHh
Confidence 9999999888887777642 34456655 78999999996 899999999863
|
| >3tjm_A Fatty acid synthase; thioesterase domain, fatty acid synthesis, hydrolase-hydrola inhibitor complex; HET: 7FA; 1.48A {Homo sapiens} PDB: 1xkt_A | Back alignment and structure |
|---|
Probab=99.71 E-value=7.4e-17 Score=138.32 Aligned_cols=92 Identities=9% Similarity=0.129 Sum_probs=74.7
Q ss_pred CceEEEEcCCCCCCccchhhHHHhhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCceEEEE
Q 022534 35 LGTIVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEELDKLLDVLEVKYPFFLVV 114 (295)
Q Consensus 35 ~~~vv~lHG~~~~~~~w~~~~~~l~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~~lv~ 114 (295)
+++|||+||+++++..|..+++.|. ++|+++|++|. . ..++++++++++.++++.+....+++|+
T Consensus 24 ~~~l~~~hg~~~~~~~~~~~~~~L~---~~v~~~d~~~~----~-------~~~~~~~~a~~~~~~i~~~~~~~~~~l~- 88 (283)
T 3tjm_A 24 ERPLFLVHPIEGSTTVFHSLASRLS---IPTYGLQCTRA----A-------PLDSIHSLAAYYIDCIRQVQPEGPYRVA- 88 (283)
T ss_dssp SCCEEEECCTTCCSGGGHHHHHHCS---SCEEEECCCTT----S-------CCSCHHHHHHHHHHHHTTTCCSSCCEEE-
T ss_pred CCeEEEECCCCCCHHHHHHHHHhcC---ceEEEEecCCC----C-------CCCCHHHHHHHHHHHHHHhCCCCCEEEE-
Confidence 4689999999999999999999995 89999999641 1 1247889999999999988665577777
Q ss_pred ecccchH-HHHHHHHhC---cCccc---eeEEEcC
Q 022534 115 QGFLVGS-YGLTWALKN---PSRIS---KLAILNS 142 (295)
Q Consensus 115 ~G~~~G~-~~~~~a~~~---p~~v~---~lil~~~ 142 (295)
|||+|+ ++..+|.+. |++|. +++++++
T Consensus 89 -GhS~Gg~va~~~a~~~~~~~~~v~~~~~lvlid~ 122 (283)
T 3tjm_A 89 -GYSYGACVAFEMCSQLQAQQSPAPTHNSLFLFDG 122 (283)
T ss_dssp -EETHHHHHHHHHHHHHHHHHTTSCCCCEEEEESC
T ss_pred -EECHhHHHHHHHHHHHHHcCCCCCccceEEEEcC
Confidence 777764 677777754 88898 9999975
|
| >1tca_A Lipase; hydrolase(carboxylic esterase); HET: NAG; 1.55A {Candida antarctica} SCOP: c.69.1.17 PDB: 1lbs_A* 1lbt_A* 1tcb_A* 1tcc_A* | Back alignment and structure |
|---|
Probab=99.71 E-value=4.4e-17 Score=141.97 Aligned_cols=198 Identities=13% Similarity=0.025 Sum_probs=122.8
Q ss_pred CceEEEEcCCCCCCcc-ch-hhHHHhhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCceEE
Q 022534 35 LGTIVFLHGAPSHSYS-YR-NVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEELDKLLDVLEVKYPFFL 112 (295)
Q Consensus 35 ~~~vv~lHG~~~~~~~-w~-~~~~~l~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~~l 112 (295)
+++|||+||++++... |. .+++.|+++||+|+++|+||||.|+.. .+.+++...+..++++.+.++ +++
T Consensus 31 ~~~VvllHG~~~~~~~~~~~~l~~~L~~~G~~v~~~d~~g~g~~~~~--------~~~~~l~~~i~~~~~~~g~~~-v~l 101 (317)
T 1tca_A 31 SKPILLVPGTGTTGPQSFDSNWIPLSTQLGYTPCWISPPPFMLNDTQ--------VNTEYMVNAITALYAGSGNNK-LPV 101 (317)
T ss_dssp SSEEEEECCTTCCHHHHHTTTHHHHHHTTTCEEEEECCTTTTCSCHH--------HHHHHHHHHHHHHHHHTTSCC-EEE
T ss_pred CCeEEEECCCCCCcchhhHHHHHHHHHhCCCEEEEECCCCCCCCcHH--------HHHHHHHHHHHHHHHHhCCCC-EEE
Confidence 4689999999999887 98 899999877999999999999987531 134567777888887777664 677
Q ss_pred EEecccchH-HHHHHHHhCc---CccceeEEEcCCCCCCCCCchhhhhhhcccchhhhhhhHHHHHHHHHhCCCcccccc
Q 022534 113 VVQGFLVGS-YGLTWALKNP---SRISKLAILNSPLTASSPLPGLFQQLRIPLLGEFTAQNAIMAERFIEAGSPYVLKLD 188 (295)
Q Consensus 113 v~~G~~~G~-~~~~~a~~~p---~~v~~lil~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (295)
| |||+|+ ++..++..+| ++|+++|++++|..... . .. +. ..+ . ...
T Consensus 102 V--GhS~GG~va~~~~~~~~~~~~~v~~lV~l~~~~~g~~----~-~~--------~~-------~~~---~---~~~-- 151 (317)
T 1tca_A 102 L--TWSQGGLVAQWGLTFFPSIRSKVDRLMAFAPDYKGTV----L-AG--------PL-------DAL---A---VSA-- 151 (317)
T ss_dssp E--EETHHHHHHHHHHHHCGGGTTTEEEEEEESCCTTCBG----G-GH--------HH-------HHT---T---CBC--
T ss_pred E--EEChhhHHHHHHHHHcCccchhhhEEEEECCCCCCCc----c-hh--------hh-------hhh---h---hcC--
Confidence 7 778775 4555556665 78999999976543210 0 00 00 000 0 000
Q ss_pred ccccccccccccCCchhHHHHHHHhcchhhhhHhhhcCcCCCCCCCcEEEEEeCCCCCCCcch--HHHHHhcCCCCeEEE
Q 022534 189 KADVYRLPYLASSGPGFALLEAARKVNFKDISSRIGAGFSSGSWDKPVLVAWGISDKYLPQSV--AEEFQKGNPNVVKLQ 266 (295)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~~~~~--~~~~~~~~~~~~~~~ 266 (295)
...... ..+..+...+.. .. . ...++|+++|+|+.|.++++.. .......+++ ++.+
T Consensus 152 -~~~~~~------~~~s~f~~~L~~--------~~-~----~~~~vp~~~i~g~~D~iV~p~~~~g~~~~~~l~~-a~~~ 210 (317)
T 1tca_A 152 -PSVWQQ------TTGSALTTALRN--------AG-G----LTQIVPTTNLYSATDEIVQPQVSNSPLDSSYLFN-GKNV 210 (317)
T ss_dssp -HHHHHT------BTTCHHHHHHHH--------TT-T----TBCSSCEEEEECTTCSSSCCCCSSSTTSTTCCBT-SEEE
T ss_pred -chHHhh------CcCcHHHHHHHh--------cC-C----CCCCCCEEEEEeCCCCeECCccccccchhhhccC-CccE
Confidence 000000 000011111110 00 0 0236999999999999987765 2222233433 3333
Q ss_pred Ee-------cCCCCCCCCCChHHHHHHHHHHHHh
Q 022534 267 MI-------EGAGHMPQEDWPEKVVDGLRYFFLN 293 (295)
Q Consensus 267 ~i-------~~~gH~~~~e~p~~~~~~i~~fl~~ 293 (295)
.+ +++||..++++|+.+ +.|.+||..
T Consensus 211 ~~~~~~~~~~~~gH~~~l~~p~~~-~~v~~~L~~ 243 (317)
T 1tca_A 211 QAQAVCGPLFVIDHAGSLTSQFSY-VVGRSALRS 243 (317)
T ss_dssp EHHHHHCTTCCCCTTHHHHBHHHH-HHHHHHHHC
T ss_pred EeeeccCCCCccCcccccCCHHHH-HHHHHHhcC
Confidence 33 589999999999865 677888864
|
| >1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.71 E-value=5.1e-16 Score=149.23 Aligned_cols=226 Identities=11% Similarity=0.061 Sum_probs=134.6
Q ss_pred eEEeCcEEEEEEEcCCCC----CCCceEEEEcCCCCCCc---cch-hhHHHhh-hCCCeEEEeCCCCCCCCCCCCCCCCC
Q 022534 15 YIKSGEYRWFVRETGSAD----SRLGTIVFLHGAPSHSY---SYR-NVMSQMS-DAGFHCFAPDWLGFGFSDKPEKGYDD 85 (295)
Q Consensus 15 ~~~~~~~~~~~~~~g~~~----~~~~~vv~lHG~~~~~~---~w~-~~~~~l~-~~~~~via~Dl~G~G~S~~~~~~~~~ 85 (295)
.+..++..+++..+.+.. .+.|+||++||++++.. .|. .+...|. ++||.|+++|+||||.|.........
T Consensus 472 ~~~~~~~~l~~~~~~P~~~~~~~~~p~vl~~hG~~~~~~~~~~~~~~~~~~l~~~~G~~v~~~d~rG~g~~~~~~~~~~~ 551 (719)
T 1z68_A 472 KLEVDEITLWYKMILPPQFDRSKKYPLLIQVYGGPCSQSVRSVFAVNWISYLASKEGMVIALVDGRGTAFQGDKLLYAVY 551 (719)
T ss_dssp EEEETTEEEEEEEEECTTCCSSSCEEEEEEECCCTTBCCCCCCCCCCHHHHHHHTTCCEEEEEECTTBSSSCHHHHGGGT
T ss_pred EEecCCeEEEEEEEeCCCCCCCCCccEEEEECCCCCcCcccccchhhHHHHHHhcCCeEEEEEcCCCCCCCchhhHHHHh
Confidence 344555788877765432 23578999999987643 454 3455554 57999999999999998743100000
Q ss_pred CCCCHHHHHHHHHHHHHHhC----CC-CceEEEEecccchH-HHHHHHHhCcCccceeEEEcCCCCCCCCCchhhhhhhc
Q 022534 86 FDFTENEFHEELDKLLDVLE----VK-YPFFLVVQGFLVGS-YGLTWALKNPSRISKLAILNSPLTASSPLPGLFQQLRI 159 (295)
Q Consensus 86 ~~~~~~~~~~~l~~~~~~l~----~~-~~~~lv~~G~~~G~-~~~~~a~~~p~~v~~lil~~~p~~~~~~~~~~~~~~~~ 159 (295)
..+. .....|+.++++.+. ++ +.+.++ |||+|+ +++.+|.++|+++++++++++..... ...
T Consensus 552 ~~~~-~~~~~d~~~~~~~l~~~~~~d~~~i~l~--G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~~-~~~-------- 619 (719)
T 1z68_A 552 RKLG-VYEVEDQITAVRKFIEMGFIDEKRIAIW--GWSYGGYVSSLALASGTGLFKCGIAVAPVSSWE-YYA-------- 619 (719)
T ss_dssp TCTT-HHHHHHHHHHHHHHHTTSCEEEEEEEEE--EETHHHHHHHHHHTTSSSCCSEEEEESCCCCTT-TSB--------
T ss_pred hccC-cccHHHHHHHHHHHHhcCCCCCceEEEE--EECHHHHHHHHHHHhCCCceEEEEEcCCccChH-Hhc--------
Confidence 0111 123344444444331 11 235555 777764 57777888999999999885432210 000
Q ss_pred ccchhhhhhhHHHHHHHHHhCCCccccccccccccccccccCCchhHHHHHHHhcchhhhhHhhhcCcCCCCCCC-cEEE
Q 022534 160 PLLGEFTAQNAIMAERFIEAGSPYVLKLDKADVYRLPYLASSGPGFALLEAARKVNFKDISSRIGAGFSSGSWDK-PVLV 238 (295)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-P~l~ 238 (295)
....++++ +.+... . . ...+ ...+..... .++++ |+|+
T Consensus 620 ----------~~~~~~~~--g~~~~~--~--~-------------~~~~---~~~~~~~~~---------~~~~~~P~li 658 (719)
T 1z68_A 620 ----------SVYTERFM--GLPTKD--D--N-------------LEHY---KNSTVMARA---------EYFRNVDYLL 658 (719)
T ss_dssp ----------HHHHHHHH--CCSSTT--T--T-------------HHHH---HHTCSGGGG---------GGGTTSEEEE
T ss_pred ----------cccchhhc--CCcccc--c--c-------------hhhh---hhCCHhHHH---------hcCCCCcEEE
Confidence 00111221 111000 0 0 0000 001111111 13466 8999
Q ss_pred EEeCCCCCCCcchHHHHHhcCC---CCeEEEEecCCCCCCCCCChHHHHHHHHHHHHh
Q 022534 239 AWGISDKYLPQSVAEEFQKGNP---NVVKLQMIEGAGHMPQEDWPEKVVDGLRYFFLN 293 (295)
Q Consensus 239 i~G~~D~~~~~~~~~~~~~~~~---~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 293 (295)
++|++|..++++.+.++.+.++ ..++++++|++||....++++++.+.+.+||..
T Consensus 659 ~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 716 (719)
T 1z68_A 659 IHGTADDNVHFQNSAQIAKALVNAQVDFQAMWYSDQNHGLSGLSTNHLYTHMTHFLKQ 716 (719)
T ss_dssp EEETTCSSSCTHHHHHHHHHHHHTTCCCEEEEETTCCTTCCTHHHHHHHHHHHHHHHH
T ss_pred EEeCCCCCcCHHHHHHHHHHHHHCCCceEEEEECcCCCCCCcccHHHHHHHHHHHHHH
Confidence 9999999999888877766432 236899999999999777899999999999976
|
| >4h0c_A Phospholipase/carboxylesterase; PSI-biology, midwest center for structural genomics, MCSG, hydrolase; HET: CIT; 1.62A {Dyadobacter fermentans} | Back alignment and structure |
|---|
Probab=99.71 E-value=2.6e-16 Score=129.06 Aligned_cols=186 Identities=15% Similarity=0.201 Sum_probs=121.6
Q ss_pred cCCC-CCCCceEEEEcCCCCCCccchhhHHHhhhCCCeEEEeCCCCCCCCCCCCCC-CCCCCCCHHHHHHHHHHHHHH--
Q 022534 28 TGSA-DSRLGTIVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKG-YDDFDFTENEFHEELDKLLDV-- 103 (295)
Q Consensus 28 ~g~~-~~~~~~vv~lHG~~~~~~~w~~~~~~l~~~~~~via~Dl~G~G~S~~~~~~-~~~~~~~~~~~~~~l~~~~~~-- 103 (295)
.|.+ ++.+++||||||++++...|..+++.|...++.|++||.+|++.-+..... .......+++..+.+..+++.
T Consensus 14 ~g~P~~~a~~~Vv~lHG~G~~~~~~~~l~~~l~~~~~~v~~P~~~g~~w~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 93 (210)
T 4h0c_A 14 SGVPVQRAKKAVVMLHGRGGTAADIISLQKVLKLDEMAIYAPQATNNSWYPYSFMAPVQQNQPALDSALALVGEVVAEIE 93 (210)
T ss_dssp EESCTTTCSEEEEEECCTTCCHHHHHGGGGTSSCTTEEEEEECCGGGCSSSSCTTSCGGGGTTHHHHHHHHHHHHHHHHH
T ss_pred CCCCcccCCcEEEEEeCCCCCHHHHHHHHHHhCCCCeEEEeecCCCCCccccccCCCcccchHHHHHHHHHHHHHHHHHH
Confidence 4543 344689999999999999999999999877999999999998754322111 001111234444555555543
Q ss_pred -hCCC-CceEEEEecccch-HHHHHHHHhCcCccceeEEEcCCCCCCCCCchhhhhhhcccchhhhhhhHHHHHHHHHhC
Q 022534 104 -LEVK-YPFFLVVQGFLVG-SYGLTWALKNPSRISKLAILNSPLTASSPLPGLFQQLRIPLLGEFTAQNAIMAERFIEAG 180 (295)
Q Consensus 104 -l~~~-~~~~lv~~G~~~G-~~~~~~a~~~p~~v~~lil~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (295)
.+++ +.++++ |+|.| .+++.+++++|+++.+++.+++...... ..
T Consensus 94 ~~~i~~~ri~l~--G~S~Gg~~a~~~a~~~p~~~~~vv~~sg~l~~~~-~~----------------------------- 141 (210)
T 4h0c_A 94 AQGIPAEQIYFA--GFSQGACLTLEYTTRNARKYGGIIAFTGGLIGQE-LA----------------------------- 141 (210)
T ss_dssp HTTCCGGGEEEE--EETHHHHHHHHHHHHTBSCCSEEEEETCCCCSSS-CC-----------------------------
T ss_pred HhCCChhhEEEE--EcCCCcchHHHHHHhCcccCCEEEEecCCCCChh-hh-----------------------------
Confidence 3443 235555 77766 5678889999999999998853211000 00
Q ss_pred CCccccccccccccccccccCCchhHHHHHHHhcchhhhhHhhhcCcCCCCCCCcEEEEEeCCCCCCCcchHHHHHhc--
Q 022534 181 SPYVLKLDKADVYRLPYLASSGPGFALLEAARKVNFKDISSRIGAGFSSGSWDKPVLVAWGISDKYLPQSVAEEFQKG-- 258 (295)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~-- 258 (295)
. .. . .. ..-++|++++||++|+++|.+.++++.+.
T Consensus 142 ----~----~~-----~-------------------~~-----------~~~~~Pvl~~hG~~D~~vp~~~~~~~~~~L~ 178 (210)
T 4h0c_A 142 ----I----GN-----Y-------------------KG-----------DFKQTPVFISTGNPDPHVPVSRVQESVTILE 178 (210)
T ss_dssp ----G----GG-----C-------------------CB-----------CCTTCEEEEEEEESCTTSCHHHHHHHHHHHH
T ss_pred ----h----hh-----h-------------------hh-----------hccCCceEEEecCCCCccCHHHHHHHHHHHH
Confidence 0 00 0 00 01158999999999999999887765443
Q ss_pred -CCCCeEEEEecCCCCCCCCCChHHHHHHHHHHHH
Q 022534 259 -NPNVVKLQMIEGAGHMPQEDWPEKVVDGLRYFFL 292 (295)
Q Consensus 259 -~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~ 292 (295)
....++++++|+.||... ++++ +.|++||.
T Consensus 179 ~~g~~v~~~~ypg~gH~i~---~~el-~~i~~wL~ 209 (210)
T 4h0c_A 179 DMNAAVSQVVYPGRPHTIS---GDEI-QLVNNTIL 209 (210)
T ss_dssp HTTCEEEEEEEETCCSSCC---HHHH-HHHHHTTT
T ss_pred HCCCCeEEEEECCCCCCcC---HHHH-HHHHHHHc
Confidence 333579999999999763 4554 67888875
|
| >4ao6_A Esterase; hydrolase, thermo label; 1.60A {Unidentified} PDB: 4ao7_A 4ao8_A | Back alignment and structure |
|---|
Probab=99.71 E-value=1.6e-15 Score=128.25 Aligned_cols=205 Identities=16% Similarity=0.093 Sum_probs=115.1
Q ss_pred ccceeeEEeCcEEEEEEEcCCC-CCCCceEEEEcCCCCCCc--cchhhHHHhhhCCCeEEEeCCCCCCCCCCCCCCCCCC
Q 022534 10 REYGSYIKSGEYRWFVRETGSA-DSRLGTIVFLHGAPSHSY--SYRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDF 86 (295)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~g~~-~~~~~~vv~lHG~~~~~~--~w~~~~~~l~~~~~~via~Dl~G~G~S~~~~~~~~~~ 86 (295)
.|...+++.+|.++...-+-+. ..+.|.||++||++++.. .+..+++.|+++||.|+++|+||||.|..........
T Consensus 30 ~e~~~~~~~dG~~i~g~l~~P~~~~~~p~Vl~~HG~g~~~~~~~~~~~a~~la~~Gy~Vl~~D~rG~G~s~~~~~~~~~~ 109 (259)
T 4ao6_A 30 QERGFSLEVDGRTVPGVYWSPAEGSSDRLVLLGHGGTTHKKVEYIEQVAKLLVGRGISAMAIDGPGHGERASVQAGREPT 109 (259)
T ss_dssp EEEEEEEEETTEEEEEEEEEESSSCCSEEEEEEC--------CHHHHHHHHHHHTTEEEEEECCCC-------------C
T ss_pred eEEEEEEeeCCeEEEEEEEeCCCCCCCCEEEEeCCCcccccchHHHHHHHHHHHCCCeEEeeccCCCCCCCCcccccccc
Confidence 4556778889999987666432 234578889999998754 4567888999999999999999999987532211000
Q ss_pred CC----C----------HHHHHHHHHHHHHH----hCCCCceEEEEecccch-HHHHHHHHhCcCccceeEEEcCCCCCC
Q 022534 87 DF----T----------ENEFHEELDKLLDV----LEVKYPFFLVVQGFLVG-SYGLTWALKNPSRISKLAILNSPLTAS 147 (295)
Q Consensus 87 ~~----~----------~~~~~~~l~~~~~~----l~~~~~~~lv~~G~~~G-~~~~~~a~~~p~~v~~lil~~~p~~~~ 147 (295)
+. . ......+....++. .+.+ ++.++ |+|+| .+++.+|...|+ +++.++.......
T Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~d~~a~l~~l~~~~d~~-rv~~~--G~S~GG~~a~~~a~~~pr-i~Aav~~~~~~~~- 184 (259)
T 4ao6_A 110 DVVGLDAFPRMWHEGGGTAAVIADWAAALDFIEAEEGPR-PTGWW--GLSMGTMMGLPVTASDKR-IKVALLGLMGVEG- 184 (259)
T ss_dssp CGGGSTTHHHHHHHTTHHHHHHHHHHHHHHHHHHHHCCC-CEEEE--ECTHHHHHHHHHHHHCTT-EEEEEEESCCTTS-
T ss_pred hhhhhhhhhhhhhhhhhHHHHHHHHHHHHHHhhhccCCc-eEEEE--eechhHHHHHHHHhcCCc-eEEEEEecccccc-
Confidence 00 0 01112232233322 3334 45554 67765 456677778874 6655543211000
Q ss_pred CCCchhhhhhhcccchhhhhhhHHHHHHHHHhCCCccccccccccccccccccCCchhHHHHHHHhcchhhhhHhhhcCc
Q 022534 148 SPLPGLFQQLRIPLLGEFTAQNAIMAERFIEAGSPYVLKLDKADVYRLPYLASSGPGFALLEAARKVNFKDISSRIGAGF 227 (295)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (295)
. . . .... +. .
T Consensus 185 ---~---------------~--~----------------------------------~~~~---------~~---a---- 194 (259)
T 4ao6_A 185 ---V---------------N--G----------------------------------EDLV---------RL---A---- 194 (259)
T ss_dssp ---T---------------T--H----------------------------------HHHH---------HH---G----
T ss_pred ---c---------------c--c----------------------------------cchh---------hh---h----
Confidence 0 0 0 0000 00 0
Q ss_pred CCCCCCCcEEEEEeCCCCCCCcchHHHHHhcCCC-CeEEEEecCCCCCCCCCChHHHHHHHHHHHHhc
Q 022534 228 SSGSWDKPVLVAWGISDKYLPQSVAEEFQKGNPN-VVKLQMIEGAGHMPQEDWPEKVVDGLRYFFLNY 294 (295)
Q Consensus 228 ~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~-~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~ 294 (295)
.++++|+|+++|++|+++|++.+..+++.++. +++++++|+ +|... ...+..+.+.+||.+.
T Consensus 195 --~~i~~P~Li~hG~~D~~vp~~~~~~l~~al~~~~k~l~~~~G-~H~~~--p~~e~~~~~~~fl~~h 257 (259)
T 4ao6_A 195 --PQVTCPVRYLLQWDDELVSLQSGLELFGKLGTKQKTLHVNPG-KHSAV--PTWEMFAGTVDYLDQR 257 (259)
T ss_dssp --GGCCSCEEEEEETTCSSSCHHHHHHHHHHCCCSSEEEEEESS-CTTCC--CHHHHTHHHHHHHHHH
T ss_pred --ccCCCCEEEEecCCCCCCCHHHHHHHHHHhCCCCeEEEEeCC-CCCCc--CHHHHHHHHHHHHHHh
Confidence 14579999999999999999999999877653 467888886 66421 2346777888898763
|
| >2qru_A Uncharacterized protein; alpha/beta-hydrolase, structural GENO PSI-2, protein structure initiative, midwest center for STR genomics, MCSG; 1.65A {Enterococcus faecalis} | Back alignment and structure |
|---|
Probab=99.70 E-value=1.8e-15 Score=128.90 Aligned_cols=238 Identities=13% Similarity=0.092 Sum_probs=124.3
Q ss_pred CcEEEEEEEcCCCCCCCceEEEEcCCC---CCCccc-hhhHHHhhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCCHHHHH
Q 022534 19 GEYRWFVRETGSADSRLGTIVFLHGAP---SHSYSY-RNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFH 94 (295)
Q Consensus 19 ~~~~~~~~~~g~~~~~~~~vv~lHG~~---~~~~~w-~~~~~~l~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~ 94 (295)
+|..+.+-.... .+.|+||++||++ ++...| ..+.+.+++.||+|+++|+|+.+.+ ......
T Consensus 13 ~~~~~~~y~p~~--~~~p~iv~~HGGg~~~g~~~~~~~~~~~~l~~~g~~Vi~vdYrlaPe~------------~~p~~~ 78 (274)
T 2qru_A 13 NGATVTIYPTTT--EPTNYVVYLHGGGMIYGTKSDLPEELKELFTSNGYTVLALDYLLAPNT------------KIDHIL 78 (274)
T ss_dssp TSCEEEEECCSS--SSCEEEEEECCSTTTSCCGGGCCHHHHHHHHTTTEEEEEECCCCTTTS------------CHHHHH
T ss_pred CCeeEEEEcCCC--CCCcEEEEEeCccccCCChhhchHHHHHHHHHCCCEEEEeCCCCCCCC------------CCcHHH
Confidence 555554422221 3357899999987 666656 5677778777899999999986532 123445
Q ss_pred HHHHHHHHHh----C-CCCceEEEEecccch-HHHHHHHH---hCcCccceeEEEcCCCCCCCCCchhhhhhhcccchhh
Q 022534 95 EELDKLLDVL----E-VKYPFFLVVQGFLVG-SYGLTWAL---KNPSRISKLAILNSPLTASSPLPGLFQQLRIPLLGEF 165 (295)
Q Consensus 95 ~~l~~~~~~l----~-~~~~~~lv~~G~~~G-~~~~~~a~---~~p~~v~~lil~~~p~~~~~~~~~~~~~~~~~~~~~~ 165 (295)
+|+.+.++.+ . .+ .++++ |+|+| .+++.+|. .+|.++++++++.+........+.. ....+.+...
T Consensus 79 ~D~~~al~~l~~~~~~~~-~i~l~--G~SaGG~lA~~~a~~~~~~~~~~~~~vl~~~~~~~~~~~~~~--~~~~~~~~~~ 153 (274)
T 2qru_A 79 RTLTETFQLLNEEIIQNQ-SFGLC--GRSAGGYLMLQLTKQLQTLNLTPQFLVNFYGYTDLEFIKEPR--KLLKQAISAK 153 (274)
T ss_dssp HHHHHHHHHHHHHTTTTC-CEEEE--EETHHHHHHHHHHHHHHHTTCCCSCEEEESCCSCSGGGGSCC--CSCSSCCCSG
T ss_pred HHHHHHHHHHHhccccCC-cEEEE--EECHHHHHHHHHHHHHhcCCCCceEEEEEcccccccccCCch--hhccccccHH
Confidence 5555554443 2 44 46665 66664 57777766 4678899998774322210000000 0000000000
Q ss_pred hhhhHHHHHHHHHhCCCccccccccccccccccccCCchhHHHHHHHhcch-----hhhh-HhhhcCcCCCCCCCcEEEE
Q 022534 166 TAQNAIMAERFIEAGSPYVLKLDKADVYRLPYLASSGPGFALLEAARKVNF-----KDIS-SRIGAGFSSGSWDKPVLVA 239 (295)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~-~~~~~~~~~~~~~~P~l~i 239 (295)
. ...+... .+ .........+. .+......+ .+......... .... ..+ ..+ .|++++
T Consensus 154 ~------~~~~~~~-~~-~~~~~~~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l------~~l-pP~li~ 216 (274)
T 2qru_A 154 E------IAAIDQT-KP-VWDDPFLSRYL-LYHYSIQQA-LLPHFYGLPENGDWSAYALSDETL------KTF-PPCFST 216 (274)
T ss_dssp G------GTTSCCS-SC-CSCCTTCTTHH-HHHHHHHTT-CHHHHHTCCTTSCCGGGCCCHHHH------HTS-CCEEEE
T ss_pred H------Hhhhccc-CC-CCCCccccchh-hhhhhhhhc-chhhccCcccccccccCCCChhhh------cCC-CCEEEE
Confidence 0 0000000 00 00000000000 000000000 00000000000 0000 011 134 799999
Q ss_pred EeCCCCCCCcchHHHHHhcCCCCeEEEEecCCCCCCCCCChH----HHHHHHHHHHHh
Q 022534 240 WGISDKYLPQSVAEEFQKGNPNVVKLQMIEGAGHMPQEDWPE----KVVDGLRYFFLN 293 (295)
Q Consensus 240 ~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~----~~~~~i~~fl~~ 293 (295)
+|++|++++...++++++..++ ++++++++++|.++.+.+. ++.+.+.+||..
T Consensus 217 ~G~~D~~~~~~~~~~l~~~~~~-~~l~~~~g~~H~~~~~~~~~~~~~~~~~~~~fl~~ 273 (274)
T 2qru_A 217 ASSSDEEVPFRYSKKIGRTIPE-STFKAVYYLEHDFLKQTKDPSVITLFEQLDSWLKE 273 (274)
T ss_dssp EETTCSSSCTHHHHHHHHHSTT-CEEEEECSCCSCGGGGTTSHHHHHHHHHHHHHHHT
T ss_pred EecCCCCcCHHHHHHHHHhCCC-cEEEEcCCCCcCCccCcCCHHHHHHHHHHHHHHhh
Confidence 9999999988888889988886 7999999999998776543 567888888864
|
| >3e4d_A Esterase D; S-formylglutathione hydrolase, hydrolase fold family, catalytic triad, kinetics, proposed reaction mechanism; HET: MSE; 2.01A {Agrobacterium tumefaciens} SCOP: c.69.1.0 | Back alignment and structure |
|---|
Probab=99.69 E-value=8.2e-16 Score=130.65 Aligned_cols=122 Identities=17% Similarity=0.158 Sum_probs=81.7
Q ss_pred CcEEEEEEEcCCC---CCCCceEEEEcCCCCCCccchh---hHHHhhhCCCeEEEeCCCCCCCCCCCC-CCCC-------
Q 022534 19 GEYRWFVRETGSA---DSRLGTIVFLHGAPSHSYSYRN---VMSQMSDAGFHCFAPDWLGFGFSDKPE-KGYD------- 84 (295)
Q Consensus 19 ~~~~~~~~~~g~~---~~~~~~vv~lHG~~~~~~~w~~---~~~~l~~~~~~via~Dl~G~G~S~~~~-~~~~------- 84 (295)
.|..+.+..+-+. +.+.|+||++||++++...|.. +...+.+.||.|+++|+||||.|.... ..++
T Consensus 25 ~g~~~~~~v~~P~~~~~~~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~g~~vv~~d~~g~G~s~~~~~~~~~~g~~~~~ 104 (278)
T 3e4d_A 25 LKSEMTFAVYVPPKAIHEPCPVVWYLSGLTCTHANVMEKGEYRRMASELGLVVVCPDTSPRGNDVPDELTNWQMGKGAGF 104 (278)
T ss_dssp TTEEEEEEEEECGGGGTSCEEEEEEECCTTCCSHHHHHHSCCHHHHHHHTCEEEECCSSCCSTTSCCCTTCTTSBTTBCT
T ss_pred cCCcceEEEEcCCCCCCCCCCEEEEEcCCCCCccchhhcccHHHHHhhCCeEEEecCCcccCcccccccccccccCCccc
Confidence 4566666555432 2346899999999999988887 444455558999999999999986432 0000
Q ss_pred ---------CCCCC-HHHHHHHHHHHHHHh-CCC-CceEEEEecccch-HHHHHHHHhCcCccceeEEEcC
Q 022534 85 ---------DFDFT-ENEFHEELDKLLDVL-EVK-YPFFLVVQGFLVG-SYGLTWALKNPSRISKLAILNS 142 (295)
Q Consensus 85 ---------~~~~~-~~~~~~~l~~~~~~l-~~~-~~~~lv~~G~~~G-~~~~~~a~~~p~~v~~lil~~~ 142 (295)
...+. .+..++++.+++++. +++ ++++++ |||+| .+++.+|.++|+++++++++++
T Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~i~l~--G~S~GG~~a~~~a~~~p~~~~~~v~~~~ 173 (278)
T 3e4d_A 105 YLDATEEPWSEHYQMYSYVTEELPALIGQHFRADMSRQSIF--GHSMGGHGAMTIALKNPERFKSCSAFAP 173 (278)
T ss_dssp TSBCCSTTTTTTCBHHHHHHTHHHHHHHHHSCEEEEEEEEE--EETHHHHHHHHHHHHCTTTCSCEEEESC
T ss_pred cccCCcCcccchhhHHHHHHHHHHHHHHhhcCCCcCCeEEE--EEChHHHHHHHHHHhCCcccceEEEeCC
Confidence 00111 223456677777765 552 345565 77765 5678888999999999998853
|
| >4e15_A Kynurenine formamidase; alpha/beta hydrolase fold, hydrolase-hydrolase inhibitor COM; HET: SEB; 1.50A {Drosophila melanogaster} PDB: 4e14_A* 4e11_A | Back alignment and structure |
|---|
Probab=99.69 E-value=2.8e-17 Score=142.01 Aligned_cols=203 Identities=12% Similarity=0.098 Sum_probs=122.5
Q ss_pred CCCceEEEEcCC---CCCCccchhhHHHhhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH---HHHhCC
Q 022534 33 SRLGTIVFLHGA---PSHSYSYRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEELDKL---LDVLEV 106 (295)
Q Consensus 33 ~~~~~vv~lHG~---~~~~~~w~~~~~~l~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~l~~~---~~~l~~ 106 (295)
.+.|+|||+||+ .++...|..+++.|+++||.|+++|+||+|.+..+. ..++....+..+ .+.++.
T Consensus 80 ~~~p~vv~~HGgg~~~~~~~~~~~~~~~l~~~G~~v~~~d~r~~~~~~~~~--------~~~d~~~~~~~l~~~~~~~~~ 151 (303)
T 4e15_A 80 NQAPLFVFVHGGYWQEMDMSMSCSIVGPLVRRGYRVAVMDYNLCPQVTLEQ--------LMTQFTHFLNWIFDYTEMTKV 151 (303)
T ss_dssp TTCCEEEEECCSTTTSCCGGGSCTTHHHHHHTTCEEEEECCCCTTTSCHHH--------HHHHHHHHHHHHHHHHHHTTC
T ss_pred CCCCEEEEECCCcCcCCChhHHHHHHHHHHhCCCEEEEecCCCCCCCChhH--------HHHHHHHHHHHHHHHhhhcCC
Confidence 346899999994 456677888899998889999999999998764321 122333333333 235564
Q ss_pred CCceEEEEecccchH-HHHHHHHhCc-------CccceeEEEcCCCCCCCCCchhhhhhhcccchhhhhhhHHHHHHHHH
Q 022534 107 KYPFFLVVQGFLVGS-YGLTWALKNP-------SRISKLAILNSPLTASSPLPGLFQQLRIPLLGEFTAQNAIMAERFIE 178 (295)
Q Consensus 107 ~~~~~lv~~G~~~G~-~~~~~a~~~p-------~~v~~lil~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (295)
+ +++++ |||+|+ +++.++++.+ ++|+++++++++... ..... ....... .+
T Consensus 152 ~-~i~l~--G~S~GG~la~~~a~~~~~~~~p~~~~v~~~v~~~~~~~~----~~~~~-~~~~~~~-----------~~-- 210 (303)
T 4e15_A 152 S-SLTFA--GHXAGAHLLAQILMRPNVITAQRSKMVWALIFLCGVYDL----RELSN-LESVNPK-----------NI-- 210 (303)
T ss_dssp S-CEEEE--EETHHHHHHGGGGGCTTTSCHHHHHTEEEEEEESCCCCC----HHHHT-CTTTSGG-----------GT--
T ss_pred C-eEEEE--eecHHHHHHHHHHhccccccCcccccccEEEEEeeeecc----Hhhhc-ccccchh-----------hh--
Confidence 4 46666 777764 5666666543 379999988643321 00000 0000000 00
Q ss_pred hCCCccccccccccccccccccCCchhHHHHHHHhcchhhhhHhhhcCcCCCCCCCcEEEEEeCCCCCCCcchHHHHHhc
Q 022534 179 AGSPYVLKLDKADVYRLPYLASSGPGFALLEAARKVNFKDISSRIGAGFSSGSWDKPVLVAWGISDKYLPQSVAEEFQKG 258 (295)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~ 258 (295)
+.......... .+ .......+. ...++|+|+++|++|.+++.+.+..+++.
T Consensus 211 ------~~~~~~~~~~~------sp------------~~~~~~~~~-----~~~~~P~lii~G~~D~~v~~~~~~~~~~~ 261 (303)
T 4e15_A 211 ------LGLNERNIESV------SP------------MLWEYTDVT-----VWNSTKIYVVAAEHDSTTFIEQSRHYADV 261 (303)
T ss_dssp ------TCCCTTTTTTT------CG------------GGCCCCCGG-----GGTTSEEEEEEEEESCHHHHHHHHHHHHH
T ss_pred ------hcCCHHHHHHc------Cc------------hhhcccccc-----cCCCCCEEEEEeCCCCCCchHHHHHHHHH
Confidence 00000000000 00 000000000 02379999999999999888888887765
Q ss_pred CC---CCeEEEEecCCCCCCCCCChHHHHHHHHHHHHh
Q 022534 259 NP---NVVKLQMIEGAGHMPQEDWPEKVVDGLRYFFLN 293 (295)
Q Consensus 259 ~~---~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 293 (295)
++ ..++++++++++|+.++|++...+..+.+|+..
T Consensus 262 l~~~g~~~~~~~~~g~~H~~~~~~~~~~~~~l~~~l~~ 299 (303)
T 4e15_A 262 LRKKGYKASFTLFKGYDHFDIIEETAIDDSDVSRFLRN 299 (303)
T ss_dssp HHHHTCCEEEEEEEEEETTHHHHGGGSTTSHHHHHHHH
T ss_pred HHHCCCceEEEEeCCCCchHHHHHHhCCCcHHHHHHHH
Confidence 53 237999999999999999998888888888764
|
| >4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ... | Back alignment and structure |
|---|
Probab=99.69 E-value=1.2e-15 Score=147.51 Aligned_cols=224 Identities=11% Similarity=0.128 Sum_probs=133.4
Q ss_pred EeCcEEEEEEEcCCCC----CCCceEEEEcCCCCCC---ccch-hhHHHhh-hCCCeEEEeCCCCCCCCCCCCC--CCCC
Q 022534 17 KSGEYRWFVRETGSAD----SRLGTIVFLHGAPSHS---YSYR-NVMSQMS-DAGFHCFAPDWLGFGFSDKPEK--GYDD 85 (295)
Q Consensus 17 ~~~~~~~~~~~~g~~~----~~~~~vv~lHG~~~~~---~~w~-~~~~~l~-~~~~~via~Dl~G~G~S~~~~~--~~~~ 85 (295)
..+|..+++..+.+.. .+.|+||++||++++. ..|. .....|+ ++||.|+++|.||+|.+..... .+..
T Consensus 480 ~~dg~~l~~~~~~P~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~~~l~~~~G~~Vv~~D~rG~g~~g~~~~~~~~~~ 559 (740)
T 4a5s_A 480 ILNETKFWYQMILPPHFDKSKKYPLLLDVYAGPCSQKADTVFRLNWATYLASTENIIVASFDGRGSGYQGDKIMHAINRR 559 (740)
T ss_dssp EETTEEEEEEEEECTTCCTTSCEEEEEECCCCTTCCCCCCCCCCSHHHHHHHTTCCEEEEECCTTCSSSCHHHHGGGTTC
T ss_pred ccCCeEEEEEEEeCCCCCCCCCccEEEEECCCCcccccccccCcCHHHHHHhcCCeEEEEEcCCCCCcCChhHHHHHHhh
Confidence 6789999888775532 2357899999998762 3444 3345555 4799999999999998764210 0000
Q ss_pred C-CCCHHHHHHHHHHHHHHhCC-C-CceEEEEecccchH-HHHHHHHhCcCccceeEEEcCCCCCCCCCchhhhhhhccc
Q 022534 86 F-DFTENEFHEELDKLLDVLEV-K-YPFFLVVQGFLVGS-YGLTWALKNPSRISKLAILNSPLTASSPLPGLFQQLRIPL 161 (295)
Q Consensus 86 ~-~~~~~~~~~~l~~~~~~l~~-~-~~~~lv~~G~~~G~-~~~~~a~~~p~~v~~lil~~~p~~~~~~~~~~~~~~~~~~ 161 (295)
. .+..+++...+..+.+ .+. + ..+.++ |||+|+ +++.+|.++|++++++++++ |.... . ..
T Consensus 560 ~~~~~~~D~~~~i~~l~~-~~~~d~~ri~i~--G~S~GG~~a~~~a~~~p~~~~~~v~~~-p~~~~---~-~~------- 624 (740)
T 4a5s_A 560 LGTFEVEDQIEAARQFSK-MGFVDNKRIAIW--GWSYGGYVTSMVLGSGSGVFKCGIAVA-PVSRW---E-YY------- 624 (740)
T ss_dssp TTSHHHHHHHHHHHHHHT-STTEEEEEEEEE--EETHHHHHHHHHHTTTCSCCSEEEEES-CCCCG---G-GS-------
T ss_pred hCcccHHHHHHHHHHHHh-cCCcCCccEEEE--EECHHHHHHHHHHHhCCCceeEEEEcC-Cccch---H-Hh-------
Confidence 0 1112333333333332 221 1 235554 777765 57777788999999998774 33210 0 00
Q ss_pred chhhhhhhHHHHHHHHHhCCCccccccccccccccccccCCchhHHHHHHHhcchhhhhHhhhcCcCCCCCCC-cEEEEE
Q 022534 162 LGEFTAQNAIMAERFIEAGSPYVLKLDKADVYRLPYLASSGPGFALLEAARKVNFKDISSRIGAGFSSGSWDK-PVLVAW 240 (295)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-P~l~i~ 240 (295)
.....++++. .+... .. .............. ++++ |+|+++
T Consensus 625 -------~~~~~~~~~~--~p~~~--~~------------------~~~~~~~~~~~~~~---------~i~~~P~Lii~ 666 (740)
T 4a5s_A 625 -------DSVYTERYMG--LPTPE--DN------------------LDHYRNSTVMSRAE---------NFKQVEYLLIH 666 (740)
T ss_dssp -------BHHHHHHHHC--CSSTT--TT------------------HHHHHHSCSGGGGG---------GGGGSEEEEEE
T ss_pred -------hhHHHHHHcC--CCCcc--cc------------------HHHHHhCCHHHHHh---------cCCCCcEEEEE
Confidence 0111122221 11000 00 00011111111111 3455 999999
Q ss_pred eCCCCCCCcchHHHHHhcC---CCCeEEEEecCCCCCC-CCCChHHHHHHHHHHHHh
Q 022534 241 GISDKYLPQSVAEEFQKGN---PNVVKLQMIEGAGHMP-QEDWPEKVVDGLRYFFLN 293 (295)
Q Consensus 241 G~~D~~~~~~~~~~~~~~~---~~~~~~~~i~~~gH~~-~~e~p~~~~~~i~~fl~~ 293 (295)
|++|..++++.+.++.+.+ ...++++++|+++|.. +.+.++.+.+.+.+||..
T Consensus 667 G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~ 723 (740)
T 4a5s_A 667 GTADDNVHFQQSAQISKALVDVGVDFQAMWYTDEDHGIASSTAHQHIYTHMSHFIKQ 723 (740)
T ss_dssp ETTCSSSCTHHHHHHHHHHHHTTCCCEEEEETTCCTTCCSHHHHHHHHHHHHHHHHH
T ss_pred cCCCCccCHHHHHHHHHHHHHCCCCeEEEEECCCCCcCCCCccHHHHHHHHHHHHHH
Confidence 9999999988887776543 2236999999999998 677899999999999976
|
| >2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus} | Back alignment and structure |
|---|
Probab=99.67 E-value=7.1e-16 Score=148.08 Aligned_cols=226 Identities=12% Similarity=0.066 Sum_probs=130.9
Q ss_pred CcEEEEEEEcCCC----CCCCceEEEEcCCCCCCc--cchhhHHHhhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCCHHH
Q 022534 19 GEYRWFVRETGSA----DSRLGTIVFLHGAPSHSY--SYRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTENE 92 (295)
Q Consensus 19 ~~~~~~~~~~g~~----~~~~~~vv~lHG~~~~~~--~w~~~~~~l~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~ 92 (295)
+|..+.+..+.+. ..+.|+||++||+++... .|...+..|+++||.|+++|+||+|.+....... ........
T Consensus 426 dg~~i~~~~~~p~~~~~~~~~p~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~g~~g~~~~~~-~~~~~~~~ 504 (695)
T 2bkl_A 426 DGTKVPMFVVHRKDLKRDGNAPTLLYGYGGFNVNMEANFRSSILPWLDAGGVYAVANLRGGGEYGKAWHDA-GRLDKKQN 504 (695)
T ss_dssp TSCEEEEEEEEETTCCCSSCCCEEEECCCCTTCCCCCCCCGGGHHHHHTTCEEEEECCTTSSTTCHHHHHT-TSGGGTHH
T ss_pred CCCEEEEEEEECCCCCCCCCccEEEEECCCCccccCCCcCHHHHHHHhCCCEEEEEecCCCCCcCHHHHHh-hHhhcCCC
Confidence 6767776654322 234689999999776554 6777777777789999999999999875320000 00001122
Q ss_pred HHHHHHHHHHHh---C-CC-CceEEEEecccchH-HHHHHHHhCcCccceeEEEcCCCCCCCCCchhhhhhhcccchhhh
Q 022534 93 FHEELDKLLDVL---E-VK-YPFFLVVQGFLVGS-YGLTWALKNPSRISKLAILNSPLTASSPLPGLFQQLRIPLLGEFT 166 (295)
Q Consensus 93 ~~~~l~~~~~~l---~-~~-~~~~lv~~G~~~G~-~~~~~a~~~p~~v~~lil~~~p~~~~~~~~~~~~~~~~~~~~~~~ 166 (295)
..+|+.++++.+ + .+ +.+.++ |+|+|+ +++.++.++|++++++++..+..... . ... .+. ..
T Consensus 505 ~~~D~~~~~~~l~~~~~~~~~~i~i~--G~S~GG~la~~~~~~~p~~~~~~v~~~~~~d~~-~----~~~--~~~-~~-- 572 (695)
T 2bkl_A 505 VFDDFHAAAEYLVQQKYTQPKRLAIY--GGSNGGLLVGAAMTQRPELYGAVVCAVPLLDMV-R----YHL--FGS-GR-- 572 (695)
T ss_dssp HHHHHHHHHHHHHHTTSCCGGGEEEE--EETHHHHHHHHHHHHCGGGCSEEEEESCCCCTT-T----GGG--STT-GG--
T ss_pred cHHHHHHHHHHHHHcCCCCcccEEEE--EECHHHHHHHHHHHhCCcceEEEEEcCCccchh-h----ccc--cCC-Cc--
Confidence 334444444443 1 11 235555 667664 56677788999999998875332211 0 000 000 00
Q ss_pred hhhHHHHHHHHHhCCCccccccccccccccccccCCchhHHHHHHHhcchhhhhHhhhcCcCCCCCC--CcEEEEEeCCC
Q 022534 167 AQNAIMAERFIEAGSPYVLKLDKADVYRLPYLASSGPGFALLEAARKVNFKDISSRIGAGFSSGSWD--KPVLVAWGISD 244 (295)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~P~l~i~G~~D 244 (295)
. ....+ +.+. .+ .....+.... ....+ ..++ .|+|+++|++|
T Consensus 573 ---~-~~~~~---g~~~------------------~~--~~~~~~~~~s---p~~~~------~~~~~~~P~Li~~G~~D 616 (695)
T 2bkl_A 573 ---T-WIPEY---GTAE------------------KP--EDFKTLHAYS---PYHHV------RPDVRYPALLMMAADHD 616 (695)
T ss_dssp ---G-GHHHH---CCTT------------------SH--HHHHHHHHHC---GGGCC------CSSCCCCEEEEEEETTC
T ss_pred ---c-hHHHh---CCCC------------------CH--HHHHHHHhcC---hHhhh------hhcCCCCCEEEEeeCCC
Confidence 0 00011 1110 00 0011111111 01111 1333 69999999999
Q ss_pred CCCCcchHHHHHhcCC------CCeEEEEecCCCCCCC--CCChHHHHHHHHHHHHh
Q 022534 245 KYLPQSVAEEFQKGNP------NVVKLQMIEGAGHMPQ--EDWPEKVVDGLRYFFLN 293 (295)
Q Consensus 245 ~~~~~~~~~~~~~~~~------~~~~~~~i~~~gH~~~--~e~p~~~~~~i~~fl~~ 293 (295)
..+++..+.++.+.+. ..+++++++++||... .+++.++.+.+.+||..
T Consensus 617 ~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~ 673 (695)
T 2bkl_A 617 DRVDPMHARKFVAAVQNSPGNPATALLRIEANAGHGGADQVAKAIESSVDLYSFLFQ 673 (695)
T ss_dssp SSSCTHHHHHHHHHHHTSTTCCSCEEEEEETTCBTTBCSCHHHHHHHHHHHHHHHHH
T ss_pred CCCChHHHHHHHHHHHhhccCCCCEEEEEeCCCCcCCCCCHHHHHHHHHHHHHHHHH
Confidence 9999988888766542 2479999999999873 45677888889999976
|
| >3i6y_A Esterase APC40077; lipase, structural genomics, PSI-2, PR structure initiative, midwest center for structural genomic hydrolase; HET: MSE; 1.75A {Oleispira antarctica} PDB: 3s8y_A | Back alignment and structure |
|---|
Probab=99.67 E-value=5.2e-15 Score=125.85 Aligned_cols=123 Identities=18% Similarity=0.243 Sum_probs=80.3
Q ss_pred eCcEEEEEEEcCCC----CCCCceEEEEcCCCCCCccchh---hHHHhhhCCCeEEEeCCCCCCCCCCCCCCC-------
Q 022534 18 SGEYRWFVRETGSA----DSRLGTIVFLHGAPSHSYSYRN---VMSQMSDAGFHCFAPDWLGFGFSDKPEKGY------- 83 (295)
Q Consensus 18 ~~~~~~~~~~~g~~----~~~~~~vv~lHG~~~~~~~w~~---~~~~l~~~~~~via~Dl~G~G~S~~~~~~~------- 83 (295)
..|..+.+..+-+. ..+.|+||++||++++...|.. +...+++.||.|+++|.+|+|.+......+
T Consensus 26 ~~g~~~~~~v~~P~~~~~~~~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~g~~vv~pd~~~~g~~~~~~~~~~~G~g~~ 105 (280)
T 3i6y_A 26 TLNCAMRFAIYLPPQASTGAKVPVLYWLSGLTCSDENFMQKAGAQRLAAELGIAIVAPDTSPRGEGVADDEGYDLGQGAG 105 (280)
T ss_dssp TTTEEEEEEEEECGGGGTTCCEEEEEEECCTTCCSSHHHHHSCCHHHHHHHTCEEEEECSSCCSTTCCCCSSTTSSTTCC
T ss_pred ccCCeeEEEEEeCCCCCCCCCccEEEEecCCCCChhHHhhcccHHHHHhhCCeEEEEeCCcccccccCcccccccccCcc
Confidence 34566666555432 2346899999999999888876 344555568999999999888764322110
Q ss_pred --CC-------CCCC-HHHHHHHHHHHHHH-hCCCCceEEEEecccch-HHHHHHHHhCcCccceeEEEcC
Q 022534 84 --DD-------FDFT-ENEFHEELDKLLDV-LEVKYPFFLVVQGFLVG-SYGLTWALKNPSRISKLAILNS 142 (295)
Q Consensus 84 --~~-------~~~~-~~~~~~~l~~~~~~-l~~~~~~~lv~~G~~~G-~~~~~~a~~~p~~v~~lil~~~ 142 (295)
.. ..+. .+.+.+++.++++. ....+.++++ |||+| .+++.+|.++|+++++++++++
T Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~--G~S~GG~~a~~~a~~~p~~~~~~v~~s~ 174 (280)
T 3i6y_A 106 FYVNATQAPWNRHYQMYDYVVNELPELIESMFPVSDKRAIA--GHSMGGHGALTIALRNPERYQSVSAFSP 174 (280)
T ss_dssp TTCBCCSTTGGGTCBHHHHHHTHHHHHHHHHSSEEEEEEEE--EETHHHHHHHHHHHHCTTTCSCEEEESC
T ss_pred ccccccCCCccchhhHHHHHHHHHHHHHHHhCCCCCCeEEE--EECHHHHHHHHHHHhCCccccEEEEeCC
Confidence 00 0001 23345677777754 3442345565 77765 5678889999999999998854
|
| >3d0k_A Putative poly(3-hydroxybutyrate) depolymerase LPQ; alpha-beta-alpha sandwich, structural genomics, PSI-2; 1.83A {Bordetella parapertussis 12822} | Back alignment and structure |
|---|
Probab=99.66 E-value=6e-15 Score=127.37 Aligned_cols=124 Identities=12% Similarity=0.127 Sum_probs=80.8
Q ss_pred EeCcEEEEEEEcCCC--CCCCceEEEEcCCCCCCccc-hhhHHHhhhCCCeEEEeCCC------------CC--CCCCCC
Q 022534 17 KSGEYRWFVRETGSA--DSRLGTIVFLHGAPSHSYSY-RNVMSQMSDAGFHCFAPDWL------------GF--GFSDKP 79 (295)
Q Consensus 17 ~~~~~~~~~~~~g~~--~~~~~~vv~lHG~~~~~~~w-~~~~~~l~~~~~~via~Dl~------------G~--G~S~~~ 79 (295)
+.++..+.+..+.+. .+..|+||++||++++...| ..+++.+.+.||.|+++|+| || |.|+.+
T Consensus 34 ~~~~~~l~~~~~~P~~~~~~~p~vv~lHG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~~~~~p~~~~~~~g~~~g~s~~~ 113 (304)
T 3d0k_A 34 RNADRPFTLNTYRPYGYTPDRPVVVVQHGVLRNGADYRDFWIPAADRHKLLIVAPTFSDEIWPGVESYNNGRAFTAAGNP 113 (304)
T ss_dssp -CTTCCEEEEEEECTTCCTTSCEEEEECCTTCCHHHHHHHTHHHHHHHTCEEEEEECCTTTSCHHHHTTTTTCBCTTSCB
T ss_pred CCCCceEEEEEEeCCCCCCCCcEEEEeCCCCCCHHHHHHHHHHHHHHCCcEEEEeCCccccCCCccccccCccccccCCC
Confidence 345555555433222 23468999999999998888 67788887779999999999 77 888754
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHHhCC-CCceEEEEecccch-HHHHHHHHhCcC-ccceeEEEcCCCC
Q 022534 80 EKGYDDFDFTENEFHEELDKLLDVLEV-KYPFFLVVQGFLVG-SYGLTWALKNPS-RISKLAILNSPLT 145 (295)
Q Consensus 80 ~~~~~~~~~~~~~~~~~l~~~~~~l~~-~~~~~lv~~G~~~G-~~~~~~a~~~p~-~v~~lil~~~p~~ 145 (295)
... .....+++.+.+..+.+..+. .++++++ |||+| .+++.+|.++|+ +++++++.+++..
T Consensus 114 ~~~---~~~~~~~~~~~~~~l~~~~~~~~~~i~l~--G~S~GG~~a~~~a~~~p~~~~~~~vl~~~~~~ 177 (304)
T 3d0k_A 114 RHV---DGWTYALVARVLANIRAAEIADCEQVYLF--GHSAGGQFVHRLMSSQPHAPFHAVTAANPGWY 177 (304)
T ss_dssp CCG---GGSTTHHHHHHHHHHHHTTSCCCSSEEEE--EETHHHHHHHHHHHHSCSTTCSEEEEESCSSC
T ss_pred Ccc---cchHHHHHHHHHHHHHhccCCCCCcEEEE--EeChHHHHHHHHHHHCCCCceEEEEEecCccc
Confidence 311 012334444444444443332 2346666 77766 467788889995 7898887765553
|
| >1ycd_A Hypothetical 27.3 kDa protein in AAP1-SMF2 intergenic region; esterase, lipase, serine hydrolase, structural genomics; HET: LI5; 1.70A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.66 E-value=9e-16 Score=128.04 Aligned_cols=193 Identities=14% Similarity=0.161 Sum_probs=115.3
Q ss_pred CceEEEEcCCCCCCccchh----hHHHhhhCCCeEEEeCCC---------------------CCCCCCCCCCCCC-CCCC
Q 022534 35 LGTIVFLHGAPSHSYSYRN----VMSQMSDAGFHCFAPDWL---------------------GFGFSDKPEKGYD-DFDF 88 (295)
Q Consensus 35 ~~~vv~lHG~~~~~~~w~~----~~~~l~~~~~~via~Dl~---------------------G~G~S~~~~~~~~-~~~~ 88 (295)
+|+|||+||++++...|.. +.+.|.+.||+|+++|+| |+|.|..-..... ....
T Consensus 5 ~~~vl~lHG~g~~~~~~~~~~~~l~~~l~~~g~~v~~~d~p~~~~~~~~~~~~~~~~~~~~~g~g~~~~w~~~~~~~~~~ 84 (243)
T 1ycd_A 5 IPKLLFLHGFLQNGKVFSEKSSGIRKLLKKANVQCDYIDAPVLLEKKDLPFEMDDEKWQATLDADVNRAWFYHSEISHEL 84 (243)
T ss_dssp CCEEEEECCTTCCHHHHHHHTHHHHHHHHHTTCEEEEECCSEECCGGGCSSCCCHHHHHHHHHTTCCEESSCCCSSGGGC
T ss_pred CceEEEeCCCCccHHHHHHHHHHHHHHHhhcceEEEEcCCCeeCCCcCcccccccccccccCCCCCCcccccCCCCcchh
Confidence 4689999999999998874 556666668999999999 5565421000000 0012
Q ss_pred CHHHHHHHHHHHHHHhCCCCceEEEEecccchH-HHHHHHHhCcC------ccceeEEEcCCCCCCCCCchhhhhhhccc
Q 022534 89 TENEFHEELDKLLDVLEVKYPFFLVVQGFLVGS-YGLTWALKNPS------RISKLAILNSPLTASSPLPGLFQQLRIPL 161 (295)
Q Consensus 89 ~~~~~~~~l~~~~~~l~~~~~~~lv~~G~~~G~-~~~~~a~~~p~------~v~~lil~~~p~~~~~~~~~~~~~~~~~~ 161 (295)
++++.++.+.+.++..+ + .+.++ |||+|+ +++.+|.++++ .++..++++ +..... + .
T Consensus 85 d~~~~~~~l~~~~~~~~-~-~i~l~--G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~v~~~-g~~~~~--~---------~ 148 (243)
T 1ycd_A 85 DISEGLKSVVDHIKANG-P-YDGIV--GLSQGAALSSIITNKISELVPDHPQFKVSVVIS-GYSFTE--P---------D 148 (243)
T ss_dssp CCHHHHHHHHHHHHHHC-C-CSEEE--EETHHHHHHHHHHHHHHHHSTTCCCCSEEEEES-CCCCEE--E---------C
T ss_pred hHHHHHHHHHHHHHhcC-C-eeEEE--EeChHHHHHHHHHHHHhhcccCCCCceEEEEec-CCCCCC--c---------c
Confidence 34566677776666543 3 34555 777764 67777766532 345555443 221100 0 0
Q ss_pred chhhhhhhHHHHHHHHHhCCCccccccccccccccccccCCchhHHHHHHHhcchhhhhHhhhcCcCCCCCCCcEEEEEe
Q 022534 162 LGEFTAQNAIMAERFIEAGSPYVLKLDKADVYRLPYLASSGPGFALLEAARKVNFKDISSRIGAGFSSGSWDKPVLVAWG 241 (295)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G 241 (295)
. .. .+. . .+ .. . +..... ....+++|+|+++|
T Consensus 149 ~-~~-------------~~~---~--------~~--~~------~---------~~~~~~------~~~~~~~P~l~i~G 180 (243)
T 1ycd_A 149 P-EH-------------PGE---L--------RI--TE------K---------FRDSFA------VKPDMKTKMIFIYG 180 (243)
T ss_dssp T-TS-------------TTC---E--------EE--CG------G---------GTTTTC------CCTTCCCEEEEEEE
T ss_pred c-cc-------------ccc---c--------cc--ch------h---------HHHhcc------CcccCCCCEEEEEe
Confidence 0 00 000 0 00 00 0 000000 01256899999999
Q ss_pred CCCCCCCcchHHHHHhcCCCC------eEEEEecCCCCCCCCCChHHHHHHHHHHHHh
Q 022534 242 ISDKYLPQSVAEEFQKGNPNV------VKLQMIEGAGHMPQEDWPEKVVDGLRYFFLN 293 (295)
Q Consensus 242 ~~D~~~~~~~~~~~~~~~~~~------~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 293 (295)
++|++++++.+..+++.+++. ...++++++||....+ +.+.+.|.+||.+
T Consensus 181 ~~D~~vp~~~~~~~~~~~~~~~g~~~~~~~~~~~~~gH~~~~~--~~~~~~i~~fl~~ 236 (243)
T 1ycd_A 181 ASDQAVPSVRSKYLYDIYLKAQNGNKEKVLAYEHPGGHMVPNK--KDIIRPIVEQITS 236 (243)
T ss_dssp TTCSSSCHHHHHHHHHHHHHHTTTCTTTEEEEEESSSSSCCCC--HHHHHHHHHHHHH
T ss_pred CCCCccCHHHHHHHHHHhhhhccccccccEEEecCCCCcCCch--HHHHHHHHHHHHH
Confidence 999999998888887766531 2566788899998765 3589999999975
|
| >3fak_A Esterase/lipase, ESTE5; HSL, hydrolase; 1.90A {Uncultured bacterium} PDB: 3g9t_A 3g9u_A 3g9z_A 3h17_A* 3h18_A* 3h19_A 3h1a_A 3h1b_A 3l1h_A 3l1i_A 3l1j_A 3v9a_A | Back alignment and structure |
|---|
Probab=99.65 E-value=1.9e-14 Score=125.50 Aligned_cols=225 Identities=14% Similarity=0.109 Sum_probs=125.0
Q ss_pred EEeCcEEEEEEEcCCCCCCCceEEEEcCCC---CCCccchhhHHHhhh-CCCeEEEeCCCCCCCCCCCCCCCCCCCCCHH
Q 022534 16 IKSGEYRWFVRETGSADSRLGTIVFLHGAP---SHSYSYRNVMSQMSD-AGFHCFAPDWLGFGFSDKPEKGYDDFDFTEN 91 (295)
Q Consensus 16 ~~~~~~~~~~~~~g~~~~~~~~vv~lHG~~---~~~~~w~~~~~~l~~-~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~ 91 (295)
++.+++...+..... ..+.|+||++||++ ++...|..+...|+. .||.|+++|+|+.+.+..+ ..++
T Consensus 62 ~~~~~i~~~~~~p~~-~~~~p~vv~~HGGg~~~g~~~~~~~~~~~la~~~g~~vv~~dyr~~p~~~~~--------~~~~ 132 (322)
T 3fak_A 62 VTVAGCAAEWVRAPG-CQAGKAILYLHGGGYVMGSINTHRSMVGEISRASQAAALLLDYRLAPEHPFP--------AAVE 132 (322)
T ss_dssp EEETTEEEEEEECTT-CCTTCEEEEECCSTTTSCCHHHHHHHHHHHHHHHTSEEEEECCCCTTTSCTT--------HHHH
T ss_pred EeeCCeEEEEEeCCC-CCCccEEEEEcCCccccCChHHHHHHHHHHHHhcCCEEEEEeCCCCCCCCCC--------cHHH
Confidence 445666665543222 23468999999976 566778888888875 4999999999987654421 1345
Q ss_pred HHHHHHHHHHHHhCCC-CceEEEEecccch-HHHHHHHHhCcCc----cceeEEEcCCCCCCCCCchhhhhh-h-cccch
Q 022534 92 EFHEELDKLLDVLEVK-YPFFLVVQGFLVG-SYGLTWALKNPSR----ISKLAILNSPLTASSPLPGLFQQL-R-IPLLG 163 (295)
Q Consensus 92 ~~~~~l~~~~~~l~~~-~~~~lv~~G~~~G-~~~~~~a~~~p~~----v~~lil~~~p~~~~~~~~~~~~~~-~-~~~~~ 163 (295)
+....+..+.+. +++ ..++++ |+|+| .+++.+|++.|++ ++++++++ |.............. . .+++.
T Consensus 133 D~~~a~~~l~~~-~~d~~ri~l~--G~S~GG~lA~~~a~~~~~~~~~~~~~~vl~~-p~~~~~~~~~~~~~~~~~~~~~~ 208 (322)
T 3fak_A 133 DGVAAYRWLLDQ-GFKPQHLSIS--GDSAGGGLVLAVLVSARDQGLPMPASAIPIS-PWADMTCTNDSFKTRAEADPMVA 208 (322)
T ss_dssp HHHHHHHHHHHH-TCCGGGEEEE--EETHHHHHHHHHHHHHHHTTCCCCSEEEEES-CCCCTTCCCTHHHHTTTTCCSCC
T ss_pred HHHHHHHHHHHc-CCCCceEEEE--EcCcCHHHHHHHHHHHHhcCCCCceEEEEEC-CEecCcCCCcCHHHhCccCcccC
Confidence 666666666665 333 235565 67765 5677777776664 88898885 443221111111100 0 01110
Q ss_pred hhhhhhHHHHHHHHHhCCCccccccccccccccccccCCchhHHHHHHHhcchhhhhHhhhcCcCCCCCCCcEEEEEeCC
Q 022534 164 EFTAQNAIMAERFIEAGSPYVLKLDKADVYRLPYLASSGPGFALLEAARKVNFKDISSRIGAGFSSGSWDKPVLVAWGIS 243 (295)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~ 243 (295)
... .......+.... .... ++ ..... ... .-..|+|+++|++
T Consensus 209 ~~~--~~~~~~~~~~~~-------~~~~----~~------------------~sp~~----~~~---~~~pP~li~~g~~ 250 (322)
T 3fak_A 209 PGG--INKMAARYLNGA-------DAKH----PY------------------ASPNF----ANL---KGLPPLLIHVGRD 250 (322)
T ss_dssp SSH--HHHHHHHHHTTS-------CTTC----TT------------------TCGGG----SCC---TTCCCEEEEEETT
T ss_pred HHH--HHHHHHHhcCCC-------CCCC----cc------------------cCCCc----ccc---cCCChHhEEEcCc
Confidence 000 000011111000 0000 00 00000 000 1124999999999
Q ss_pred CCCCCcchHHHHHhc---CCCCeEEEEecCCCCCCC-----CCChHHHHHHHHHHHHh
Q 022534 244 DKYLPQSVAEEFQKG---NPNVVKLQMIEGAGHMPQ-----EDWPEKVVDGLRYFFLN 293 (295)
Q Consensus 244 D~~~~~~~~~~~~~~---~~~~~~~~~i~~~gH~~~-----~e~p~~~~~~i~~fl~~ 293 (295)
|.+++ .+..+++. ....++++++|+++|..+ .++++++.+.+.+||..
T Consensus 251 D~~~~--~~~~~~~~l~~~g~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~i~~fl~~ 306 (322)
T 3fak_A 251 EVLLD--DSIKLDAKAKADGVKSTLEIWDDMIHVWHAFHPMLPEGKQAIVRVGEFMRE 306 (322)
T ss_dssp STTHH--HHHHHHHHHHHTTCCEEEEEETTCCTTGGGGTTTCHHHHHHHHHHHHHHHH
T ss_pred CccHH--HHHHHHHHHHHcCCCEEEEEeCCceeehhhccCCCHHHHHHHHHHHHHHHH
Confidence 98753 33333322 223479999999999765 44578999999999976
|
| >3ls2_A S-formylglutathione hydrolase; psychrophilic organism; 2.20A {Pseudoalteromonas haloplanktis} SCOP: c.69.1.0 | Back alignment and structure |
|---|
Probab=99.64 E-value=1.6e-14 Score=122.75 Aligned_cols=123 Identities=19% Similarity=0.216 Sum_probs=80.1
Q ss_pred eCcEEEEEEEcCCC----CCCCceEEEEcCCCCCCccchh---hHHHhhhCCCeEEEeCCCCCCCCCCCCCCC-------
Q 022534 18 SGEYRWFVRETGSA----DSRLGTIVFLHGAPSHSYSYRN---VMSQMSDAGFHCFAPDWLGFGFSDKPEKGY------- 83 (295)
Q Consensus 18 ~~~~~~~~~~~g~~----~~~~~~vv~lHG~~~~~~~w~~---~~~~l~~~~~~via~Dl~G~G~S~~~~~~~------- 83 (295)
..|..+.+..+-+. ..+.|+||++||++++...|.. +...+++.||.|+++|.+|+|.+......+
T Consensus 24 ~~g~~~~~~v~~P~~~~~~~~~P~vv~lHG~~~~~~~~~~~~~~~~~~~~~g~~vv~~d~~~~g~~~~~~~~~~~g~g~~ 103 (280)
T 3ls2_A 24 STHCTMRFAVFLPPGASESNKVPVLYWLSGLTCTDENFMQKAGAFKKAAELGIAIVAPDTSPRGDNVPNEDSYDFAQGAG 103 (280)
T ss_dssp TTTEEEEEEEEECTTCBTTBCEEEEEEECCTTCCSHHHHHHSCCHHHHHHHTCEEEECCSSCCSTTSCCCSCTTSSTTCC
T ss_pred hcCCceEEEEEcCCCCCCCCCcCEEEEeCCCCCChhhhhcchhHHHHHhhCCeEEEEeCCcccccccccccccccccCCc
Confidence 34666666665443 2345899999999998888865 455566669999999999888764322110
Q ss_pred --C-------CCCCC-HHHHHHHHHHHHHHh-CCCCceEEEEecccch-HHHHHHHHhCcCccceeEEEcC
Q 022534 84 --D-------DFDFT-ENEFHEELDKLLDVL-EVKYPFFLVVQGFLVG-SYGLTWALKNPSRISKLAILNS 142 (295)
Q Consensus 84 --~-------~~~~~-~~~~~~~l~~~~~~l-~~~~~~~lv~~G~~~G-~~~~~~a~~~p~~v~~lil~~~ 142 (295)
. ...+. .+.+.+++..++++. ..++.+.++ |+|+| .+++.+|+++|+++++++++++
T Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~--G~S~GG~~a~~~a~~~p~~~~~~~~~s~ 172 (280)
T 3ls2_A 104 FYVNATQAPYNTHFNMYDYVVNELPALIEQHFPVTSTKAIS--GHSMGGHGALMIALKNPQDYVSASAFSP 172 (280)
T ss_dssp TTCBCCSTTTTTTCBHHHHHHTHHHHHHHHHSSEEEEEEEE--EBTHHHHHHHHHHHHSTTTCSCEEEESC
T ss_pred cccccccccccccccHHHHHHHHHHHHHHhhCCCCCCeEEE--EECHHHHHHHHHHHhCchhheEEEEecC
Confidence 0 00001 233456666666653 333345555 77765 5678889999999999998853
|
| >3qh4_A Esterase LIPW; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, tuberculosis, O LIPW, heroin esterase; 1.75A {Mycobacterium marinum} | Back alignment and structure |
|---|
Probab=99.63 E-value=9.5e-15 Score=127.18 Aligned_cols=224 Identities=12% Similarity=0.095 Sum_probs=128.4
Q ss_pred CcEEEEEEEcCCCCCCCceEEEEcCCC---CCCccchhhHHHhhh-CCCeEEEeCCCCCCCCCCCCCCCCCCCCCHHHHH
Q 022534 19 GEYRWFVRETGSADSRLGTIVFLHGAP---SHSYSYRNVMSQMSD-AGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFH 94 (295)
Q Consensus 19 ~~~~~~~~~~g~~~~~~~~vv~lHG~~---~~~~~w~~~~~~l~~-~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~ 94 (295)
+|..+.+..+.+...+.|+||++||++ ++...|..+...|+. .||.|+++|+|+.+.+..+. ..++..
T Consensus 69 ~G~~i~~~~~~P~~~~~p~vv~~HGgG~~~g~~~~~~~~~~~la~~~g~~vv~~dyr~~p~~~~p~--------~~~D~~ 140 (317)
T 3qh4_A 69 AGRPVPVRIYRAAPTPAPVVVYCHAGGFALGNLDTDHRQCLELARRARCAVVSVDYRLAPEHPYPA--------ALHDAI 140 (317)
T ss_dssp TSCEEEEEEEECSCSSEEEEEEECCSTTTSCCTTTTHHHHHHHHHHHTSEEEEECCCCTTTSCTTH--------HHHHHH
T ss_pred CCCeEEEEEEecCCCCCcEEEEECCCcCccCChHHHHHHHHHHHHHcCCEEEEecCCCCCCCCCch--------HHHHHH
Confidence 344566555544334468999999876 677789888888874 48999999999877654321 234444
Q ss_pred HHHHHHHHH---hCCC-CceEEEEecccch-HHHHHHHHhCcC----ccceeEEEcCCCCCCCCCchhhhhh-hcccchh
Q 022534 95 EELDKLLDV---LEVK-YPFFLVVQGFLVG-SYGLTWALKNPS----RISKLAILNSPLTASSPLPGLFQQL-RIPLLGE 164 (295)
Q Consensus 95 ~~l~~~~~~---l~~~-~~~~lv~~G~~~G-~~~~~~a~~~p~----~v~~lil~~~p~~~~~~~~~~~~~~-~~~~~~~ 164 (295)
..+..+.+. ++++ +.+.++ |+|+| .+++.+|..+++ .++++++++ |......... .... ..+.+..
T Consensus 141 ~a~~~l~~~~~~~~~d~~ri~l~--G~S~GG~lA~~~a~~~~~~~~~~~~~~vl~~-p~~~~~~~~~-~~~~~~~~~~~~ 216 (317)
T 3qh4_A 141 EVLTWVVGNATRLGFDARRLAVA--GSSAGATLAAGLAHGAADGSLPPVIFQLLHQ-PVLDDRPTAS-RSEFRATPAFDG 216 (317)
T ss_dssp HHHHHHHHTHHHHTEEEEEEEEE--EETHHHHHHHHHHHHHHHTSSCCCCEEEEES-CCCCSSCCHH-HHHTTTCSSSCH
T ss_pred HHHHHHHhhHHhhCCCcceEEEE--EECHHHHHHHHHHHHHHhcCCCCeeEEEEEC-ceecCCCCcC-HHHhcCCCCcCH
Confidence 444444332 4543 235554 67765 577777776655 488888874 5433221111 1110 0011000
Q ss_pred hhhhhHHHHHHHHHhCCCccccccccccccccccccCCchhHHHHHHHhcchhhhhHhhhcCcCCCCCCCcEEEEEeCCC
Q 022534 165 FTAQNAIMAERFIEAGSPYVLKLDKADVYRLPYLASSGPGFALLEAARKVNFKDISSRIGAGFSSGSWDKPVLVAWGISD 244 (295)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D 244 (295)
. ........+.... ..+.+..+ . ....+ .--.|+++++|++|
T Consensus 217 ~--~~~~~~~~~~~~~--------~~~~~~~p----------------------~---~~~~l---~~lpP~li~~G~~D 258 (317)
T 3qh4_A 217 E--AASLMWRHYLAGQ--------TPSPESVP----------------------G---RRGQL---AGLPATLITCGEID 258 (317)
T ss_dssp H--HHHHHHHHHHTTC--------CCCTTTCG----------------------G---GCSCC---TTCCCEEEEEEEES
T ss_pred H--HHHHHHHHhcCCC--------CCCcccCC----------------------C---ccccc---CCCCceeEEecCcC
Confidence 0 0000001111000 00000000 0 00000 11249999999999
Q ss_pred CCCC--cchHHHHHhcCCCCeEEEEecCCCCC-----CCCCChHHHHHHHHHHHHh
Q 022534 245 KYLP--QSVAEEFQKGNPNVVKLQMIEGAGHM-----PQEDWPEKVVDGLRYFFLN 293 (295)
Q Consensus 245 ~~~~--~~~~~~~~~~~~~~~~~~~i~~~gH~-----~~~e~p~~~~~~i~~fl~~ 293 (295)
++++ .+.++.+.+.... ++++++++++|. +..+.++++.+.+.+||..
T Consensus 259 ~~~~~~~~~a~~l~~~g~~-~~l~~~~g~~H~f~~~~~~~~~~~~~~~~~~~~l~~ 313 (317)
T 3qh4_A 259 PFRDEVLDYAQRLLGAGVS-TELHIFPRACHGFDSLLPEWTTSQRLFAMQGHALAD 313 (317)
T ss_dssp TTHHHHHHHHHHHHHTTCC-EEEEEEEEEETTHHHHCTTSHHHHHHHHHHHHHHHH
T ss_pred CCchhHHHHHHHHHHcCCC-EEEEEeCCCccchhhhcCCchHHHHHHHHHHHHHHH
Confidence 9886 4455666665554 899999999997 5667889999999999976
|
| >3ga7_A Acetyl esterase; phosphoserine, IDP00896, hydrolase, serine structural genomics, center for structural genomics of INFE diseases, csgid; HET: SEP MSE; 1.55A {Salmonella typhimurium} | Back alignment and structure |
|---|
Probab=99.63 E-value=2.9e-14 Score=124.44 Aligned_cols=224 Identities=12% Similarity=0.079 Sum_probs=123.5
Q ss_pred EEEEEEcCCCCCCCceEEEEcCCC---CCCccchhhHHHhhh-CCCeEEEeCCCCCCCCCCCCCCCCCCCCCHHHHHHHH
Q 022534 22 RWFVRETGSADSRLGTIVFLHGAP---SHSYSYRNVMSQMSD-AGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEEL 97 (295)
Q Consensus 22 ~~~~~~~g~~~~~~~~vv~lHG~~---~~~~~w~~~~~~l~~-~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~l 97 (295)
.+.+..+.+.....|+||++||++ ++...|..++..|+. .||.|+++|+|+.+.+..+. ..++....+
T Consensus 74 ~i~~~~~~p~~~~~p~vv~~HGgg~~~g~~~~~~~~~~~la~~~g~~V~~~dyr~~p~~~~~~--------~~~D~~~a~ 145 (326)
T 3ga7_A 74 DVTTRLYSPQPTSQATLYYLHGGGFILGNLDTHDRIMRLLARYTGCTVIGIDYSLSPQARYPQ--------AIEETVAVC 145 (326)
T ss_dssp CEEEEEEESSSSCSCEEEEECCSTTTSCCTTTTHHHHHHHHHHHCSEEEEECCCCTTTSCTTH--------HHHHHHHHH
T ss_pred CeEEEEEeCCCCCCcEEEEECCCCcccCChhhhHHHHHHHHHHcCCEEEEeeCCCCCCCCCCc--------HHHHHHHHH
Confidence 566555544333358999999988 888999999999986 59999999999876554221 223443333
Q ss_pred HHHHHH---hCCC-CceEEEEecccch-HHHHHHHHhCcCc------cceeEEEcCCCCCCCCCchhhhhhhcccchhhh
Q 022534 98 DKLLDV---LEVK-YPFFLVVQGFLVG-SYGLTWALKNPSR------ISKLAILNSPLTASSPLPGLFQQLRIPLLGEFT 166 (295)
Q Consensus 98 ~~~~~~---l~~~-~~~~lv~~G~~~G-~~~~~~a~~~p~~------v~~lil~~~p~~~~~~~~~~~~~~~~~~~~~~~ 166 (295)
..+.+. ++++ +.++++ |+|+| .+++.+|.++|++ +++++++. |.......... ....... ..+
T Consensus 146 ~~l~~~~~~~~~d~~ri~l~--G~S~GG~la~~~a~~~~~~~~~~~~~~~~vl~~-~~~~~~~~~~~-~~~~~~~-~~l- 219 (326)
T 3ga7_A 146 SYFSQHADEYSLNVEKIGFA--GDSAGAMLALASALWLRDKHIRCGNVIAILLWY-GLYGLQDSVSR-RLFGGAW-DGL- 219 (326)
T ss_dssp HHHHHTTTTTTCCCSEEEEE--EETHHHHHHHHHHHHHHHHTCCSSEEEEEEEES-CCCSCSCCHHH-HHCCCTT-TTC-
T ss_pred HHHHHhHHHhCCChhheEEE--EeCHHHHHHHHHHHHHHhcCCCccCceEEEEec-cccccCCChhH-hhhcCCC-CCC-
Confidence 333332 2433 345555 67765 5777788777764 88888774 44322111100 0000000 000
Q ss_pred hhhHHHHHHHHHhCCCccccccccccccccccccCCchhHHHHHHHhcchhhhhHhhhcCcCCCCCCCcEEEEEeCCCCC
Q 022534 167 AQNAIMAERFIEAGSPYVLKLDKADVYRLPYLASSGPGFALLEAARKVNFKDISSRIGAGFSSGSWDKPVLVAWGISDKY 246 (295)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~ 246 (295)
.. .. ...+...... .. ... ..++ ... .... ..+...|+++++|++|++
T Consensus 220 ~~-~~-~~~~~~~~~~---~~--~~~-~~~~-------------------~~~---~~~~--~~~~~~P~li~~G~~D~~ 267 (326)
T 3ga7_A 220 TR-ED-LDMYEKAYLR---ND--EDR-ESPW-------------------YCL---FNND--LTRDVPPCFIASAEFDPL 267 (326)
T ss_dssp CH-HH-HHHHHHHHCS---SG--GGG-GCTT-------------------TSG---GGSC--CSSCCCCEEEEEETTCTT
T ss_pred CH-HH-HHHHHHHhCC---CC--Ccc-CCcc-------------------cCC---Ccch--hhcCCCCEEEEecCcCcC
Confidence 00 00 0011100000 00 000 0000 000 0000 012357999999999998
Q ss_pred CCcchHHHHHhc---CCCCeEEEEecCCCCCCC-----CCChHHHHHHHHHHHHh
Q 022534 247 LPQSVAEEFQKG---NPNVVKLQMIEGAGHMPQ-----EDWPEKVVDGLRYFFLN 293 (295)
Q Consensus 247 ~~~~~~~~~~~~---~~~~~~~~~i~~~gH~~~-----~e~p~~~~~~i~~fl~~ 293 (295)
++ .+..+++. ....++++++++++|... .++.+++.+.+.+||..
T Consensus 268 ~~--~~~~~~~~l~~~g~~~~~~~~~g~~H~f~~~~~~~~~~~~~~~~~~~fl~~ 320 (326)
T 3ga7_A 268 ID--DSRLLHQTLQAHQQPCEYKMYPGTLHAFLHYSRMMTIADDALQDGARFFMA 320 (326)
T ss_dssp HH--HHHHHHHHHHHTTCCEEEEEETTCCTTGGGGTTTCHHHHHHHHHHHHHHHH
T ss_pred HH--HHHHHHHHHHHCCCcEEEEEeCCCccchhhhcCccHHHHHHHHHHHHHHHH
Confidence 74 33333322 223479999999999763 34568999999999975
|
| >2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A* | Back alignment and structure |
|---|
Probab=99.63 E-value=3.4e-15 Score=143.67 Aligned_cols=231 Identities=13% Similarity=0.044 Sum_probs=129.8
Q ss_pred CcEEEEEEEcCCC----CCCCceEEEEcCCCCCCcc--chhhHHHhhh-CCCeEEEeCCCCCCCCCCCC--CCC-CCCCC
Q 022534 19 GEYRWFVRETGSA----DSRLGTIVFLHGAPSHSYS--YRNVMSQMSD-AGFHCFAPDWLGFGFSDKPE--KGY-DDFDF 88 (295)
Q Consensus 19 ~~~~~~~~~~g~~----~~~~~~vv~lHG~~~~~~~--w~~~~~~l~~-~~~~via~Dl~G~G~S~~~~--~~~-~~~~~ 88 (295)
+|..+++....+. +.+.|+||++||++++... |...+..|.+ +||.|+++|+||+|.+.... ... .....
T Consensus 446 dg~~i~~~~~~p~~~~~~~~~P~vl~~hGg~~~~~~~~~~~~~~~l~~~~G~~v~~~d~rG~g~~g~~~~~~~~~~~~~~ 525 (710)
T 2xdw_A 446 DGTKIPMFIVHKKGIKLDGSHPAFLYGYGGFNISITPNYSVSRLIFVRHMGGVLAVANIRGGGEYGETWHKGGILANKQN 525 (710)
T ss_dssp TSCEEEEEEEEETTCCCSSCSCEEEECCCCTTCCCCCCCCHHHHHHHHHHCCEEEEECCTTSSTTHHHHHHTTSGGGTHH
T ss_pred CCCEEEEEEEecCCCCCCCCccEEEEEcCCCCCcCCCcccHHHHHHHHhCCcEEEEEccCCCCCCChHHHHhhhhhcCCc
Confidence 5767766554322 2346899999998876544 5555556666 79999999999999875310 000 00001
Q ss_pred CHHHHHHHHHHHHHHh--CCCCceEEEEecccch-HHHHHHHHhCcCccceeEEEcCCCCCCCCCchhhhhhhcccchhh
Q 022534 89 TENEFHEELDKLLDVL--EVKYPFFLVVQGFLVG-SYGLTWALKNPSRISKLAILNSPLTASSPLPGLFQQLRIPLLGEF 165 (295)
Q Consensus 89 ~~~~~~~~l~~~~~~l--~~~~~~~lv~~G~~~G-~~~~~~a~~~p~~v~~lil~~~p~~~~~~~~~~~~~~~~~~~~~~ 165 (295)
..+++...+..+++.- +.+ .+.++ |+|+| .+++.++.++|++++++|+..+...... ..... ...
T Consensus 526 ~~~D~~~~~~~l~~~~~~~~~-~i~i~--G~S~GG~la~~~a~~~p~~~~~~v~~~~~~d~~~-----~~~~~---~~~- 593 (710)
T 2xdw_A 526 CFDDFQCAAEYLIKEGYTSPK-RLTIN--GGSNGGLLVATCANQRPDLFGCVIAQVGVMDMLK-----FHKYT---IGH- 593 (710)
T ss_dssp HHHHHHHHHHHHHHTTSCCGG-GEEEE--EETHHHHHHHHHHHHCGGGCSEEEEESCCCCTTT-----GGGST---TGG-
T ss_pred hHHHHHHHHHHHHHcCCCCcc-eEEEE--EECHHHHHHHHHHHhCccceeEEEEcCCcccHhh-----ccccC---CCh-
Confidence 2244444444444431 223 35555 66765 4567777889999999988753222110 00000 000
Q ss_pred hhhhHHHHHHHHHhCCCccccccccccccccccccCCchhHHHHHHHhcchhhhhHhhhcCcCCCCCCC-cEEEEEeCCC
Q 022534 166 TAQNAIMAERFIEAGSPYVLKLDKADVYRLPYLASSGPGFALLEAARKVNFKDISSRIGAGFSSGSWDK-PVLVAWGISD 244 (295)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-P~l~i~G~~D 244 (295)
. ....+ +.+. .+ .....+.... ....+.. ...+.+++ |+|+++|++|
T Consensus 594 ----~-~~~~~---g~~~------------------~~--~~~~~~~~~s---p~~~~~~-~~~~~~~~pP~Li~~G~~D 641 (710)
T 2xdw_A 594 ----A-WTTDY---GCSD------------------SK--QHFEWLIKYS---PLHNVKL-PEADDIQYPSMLLLTADHD 641 (710)
T ss_dssp ----G-GHHHH---CCTT------------------SH--HHHHHHHHHC---GGGCCCC-CSSTTCCCCEEEEEEETTC
T ss_pred ----h-HHHhC---CCCC------------------CH--HHHHHHHHhC---cHhhhcc-cccccCCCCcEEEEEeCCC
Confidence 0 00011 1100 00 0011111000 0011100 00014676 9999999999
Q ss_pred CCCCcchHHHHHhcCC----------CCeEEEEecCCCCCCCCC--ChHHHHHHHHHHHHh
Q 022534 245 KYLPQSVAEEFQKGNP----------NVVKLQMIEGAGHMPQED--WPEKVVDGLRYFFLN 293 (295)
Q Consensus 245 ~~~~~~~~~~~~~~~~----------~~~~~~~i~~~gH~~~~e--~p~~~~~~i~~fl~~ 293 (295)
..+++..+.++.+.++ ..+++++++++||....+ ++.++.+.+.+||..
T Consensus 642 ~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~ 702 (710)
T 2xdw_A 642 DRVVPLHSLKFIATLQYIVGRSRKQNNPLLIHVDTKAGHGAGKPTAKVIEEVSDMFAFIAR 702 (710)
T ss_dssp CSSCTHHHHHHHHHHHHHTTTSTTCCSCEEEEEESSCCSSTTCCHHHHHHHHHHHHHHHHH
T ss_pred CccChhHHHHHHHHHHhhhccccCCCcCEEEEEeCCCCcCCCCCHHHHHHHHHHHHHHHHH
Confidence 9999888777765432 236899999999998764 457888999999975
|
| >1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum} | Back alignment and structure |
|---|
Probab=99.63 E-value=8.8e-15 Score=141.48 Aligned_cols=228 Identities=13% Similarity=0.063 Sum_probs=124.8
Q ss_pred eCcEEEEEEEcCCC--CCCCceEEEEcCCCCCCc--cchhhHHHhhhCCCeEEEeCCCCCCCCCCCC--CCC-CCCCCCH
Q 022534 18 SGEYRWFVRETGSA--DSRLGTIVFLHGAPSHSY--SYRNVMSQMSDAGFHCFAPDWLGFGFSDKPE--KGY-DDFDFTE 90 (295)
Q Consensus 18 ~~~~~~~~~~~g~~--~~~~~~vv~lHG~~~~~~--~w~~~~~~l~~~~~~via~Dl~G~G~S~~~~--~~~-~~~~~~~ 90 (295)
.+|..+.+....+. ..+.|+||++||++++.. .|......|+++||.|+++|+||+|.+.... ... .......
T Consensus 469 ~dg~~i~~~~~~p~~~~~~~p~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~g~~g~~~~~~~~~~~~~~~~ 548 (741)
T 1yr2_A 469 KDGTKVPMFIVRRKDAKGPLPTLLYGYGGFNVALTPWFSAGFMTWIDSGGAFALANLRGGGEYGDAWHDAGRRDKKQNVF 548 (741)
T ss_dssp TTSCEEEEEEEEETTCCSCCCEEEECCCCTTCCCCCCCCHHHHHHHTTTCEEEEECCTTSSTTHHHHHHTTSGGGTHHHH
T ss_pred CCCCEEEEEEEecCCCCCCCcEEEEECCCCCccCCCCcCHHHHHHHHCCcEEEEEecCCCCCCCHHHHHhhhhhcCCCcH
Confidence 35777776655432 234689999999887654 5667777787789999999999999884311 000 0000123
Q ss_pred HHHHHHHHHHHHHhCC-CCceEEEEecccchH-HHHHHHHhCcCccceeEEEcCCCCCCCCCchhhhhhhcccchhhhhh
Q 022534 91 NEFHEELDKLLDVLEV-KYPFFLVVQGFLVGS-YGLTWALKNPSRISKLAILNSPLTASSPLPGLFQQLRIPLLGEFTAQ 168 (295)
Q Consensus 91 ~~~~~~l~~~~~~l~~-~~~~~lv~~G~~~G~-~~~~~a~~~p~~v~~lil~~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (295)
+++...+..+++.--. .+.+.++ |+|+|+ +++.++.++|++++++++..+...... +.. .+. ..
T Consensus 549 ~D~~~~~~~l~~~~~~~~~ri~i~--G~S~GG~la~~~~~~~p~~~~~~v~~~~~~d~~~-----~~~--~~~-~~---- 614 (741)
T 1yr2_A 549 DDFIAAGEWLIANGVTPRHGLAIE--GGSNGGLLIGAVTNQRPDLFAAASPAVGVMDMLR-----FDQ--FTA-GR---- 614 (741)
T ss_dssp HHHHHHHHHHHHTTSSCTTCEEEE--EETHHHHHHHHHHHHCGGGCSEEEEESCCCCTTS-----GGG--STT-GG----
T ss_pred HHHHHHHHHHHHcCCCChHHEEEE--EECHHHHHHHHHHHhCchhheEEEecCCcccccc-----ccC--CCC-Cc----
Confidence 4455555555544111 1235555 667654 566777889999999987743222110 000 000 00
Q ss_pred hHHHHHHHHHhCCCccccccccccccccccccCCchhHHHHHHHhcchhhhhHhhhcCcCCCC-CCC-cEEEEEeCCCCC
Q 022534 169 NAIMAERFIEAGSPYVLKLDKADVYRLPYLASSGPGFALLEAARKVNFKDISSRIGAGFSSGS-WDK-PVLVAWGISDKY 246 (295)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-P~l~i~G~~D~~ 246 (295)
. ....+ +.+. .+ .....+.... .... ... +++ |+|+++|++|..
T Consensus 615 -~-~~~~~---g~~~------------------~~--~~~~~~~~~s---p~~~------~~~~~~~~P~Li~~G~~D~~ 660 (741)
T 1yr2_A 615 -Y-WVDDY---GYPE------------------KE--ADWRVLRRYS---PYHN------VRSGVDYPAILVTTADTDDR 660 (741)
T ss_dssp -G-GHHHH---CCTT------------------SH--HHHHHHHTTC---GGGC------CCTTSCCCEEEEEECSCCSS
T ss_pred -h-hHHHc---CCCC------------------CH--HHHHHHHHcC---chhh------hhccCCCCCEEEEeeCCCCC
Confidence 0 00001 1110 00 0011111111 0011 113 565 999999999999
Q ss_pred CCcchHHHHHhcCC------CCeEEEEecCCCCCCCCCC--hHHHHHHHHHHHHh
Q 022534 247 LPQSVAEEFQKGNP------NVVKLQMIEGAGHMPQEDW--PEKVVDGLRYFFLN 293 (295)
Q Consensus 247 ~~~~~~~~~~~~~~------~~~~~~~i~~~gH~~~~e~--p~~~~~~i~~fl~~ 293 (295)
+++..+.++.+.++ ..+++++++++||....+. +.++.+.+.+||..
T Consensus 661 v~~~~~~~~~~~l~~~~~~g~~~~l~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~ 715 (741)
T 1yr2_A 661 VVPGHSFKYTAALQTAAIGPKPHLIRIETRAGHGSGKPIDKQIEETADVQAFLAH 715 (741)
T ss_dssp SCTHHHHHHHHHHHHSCCCSSCEEEEEC---------CHHHHHHHHHHHHHHHHH
T ss_pred CChhHHHHHHHHHhhhhcCCCCEEEEEeCCCCcCCCCCHHHHHHHHHHHHHHHHH
Confidence 99888877765432 2478999999999976643 45888999999975
|
| >3fcx_A FGH, esterase D, S-formylglutathione hydrolase; retinoblastoma, genetic marker, cytoplasm, cytoplasmic vesicle, polymorphism, serine esterase; 1.50A {Homo sapiens} SCOP: c.69.1.0 | Back alignment and structure |
|---|
Probab=99.62 E-value=4e-15 Score=126.45 Aligned_cols=122 Identities=20% Similarity=0.270 Sum_probs=76.6
Q ss_pred CcEEEEEEEcCCC---CCCCceEEEEcCCCCCCccchhh---HHHhhhCCCeEEEeCC--CCCCCCCCCCC--------C
Q 022534 19 GEYRWFVRETGSA---DSRLGTIVFLHGAPSHSYSYRNV---MSQMSDAGFHCFAPDW--LGFGFSDKPEK--------G 82 (295)
Q Consensus 19 ~~~~~~~~~~g~~---~~~~~~vv~lHG~~~~~~~w~~~---~~~l~~~~~~via~Dl--~G~G~S~~~~~--------~ 82 (295)
.|..+.+..+-++ +.+.|+||++||++++...|... ...+++.||.|+++|+ ||+|.+..... .
T Consensus 26 ~~~~~~~~v~~P~~~~~~~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~g~~vv~~d~~~rG~~~~~~~~~~~~g~~~~~ 105 (282)
T 3fcx_A 26 LNCKMKFAVYLPPKAETGKCPALYWLSGLTCTEQNFISKSGYHQSASEHGLVVIAPDTSPRGCNIKGEDESWDFGTGAGF 105 (282)
T ss_dssp TTEEEEEEEEECGGGGTSCEEEEEEECCTTCCSHHHHHHSCCHHHHHHHTCEEEEECSCSSCCCC--------CCCCCCT
T ss_pred cCCeeEEEEEcCCCCCCCCCCEEEEEcCCCCCccchhhcchHHHHhhcCCeEEEEeccccCccccccccccccccCCccc
Confidence 3555555544332 23458999999999998888765 5677777999999999 77776542200 0
Q ss_pred CCCCC-------CC-HHHHHHHHHHHHH-HhCCC-CceEEEEecccch-HHHHHHHHhCcCccceeEEEcC
Q 022534 83 YDDFD-------FT-ENEFHEELDKLLD-VLEVK-YPFFLVVQGFLVG-SYGLTWALKNPSRISKLAILNS 142 (295)
Q Consensus 83 ~~~~~-------~~-~~~~~~~l~~~~~-~l~~~-~~~~lv~~G~~~G-~~~~~~a~~~p~~v~~lil~~~ 142 (295)
+.... +. .+...+++.++++ .++++ +.+.++ |+|+| .+++.+|.++|+++++++++++
T Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~i~l~--G~S~GG~~a~~~a~~~p~~~~~~v~~s~ 174 (282)
T 3fcx_A 106 YVDATEDPWKTNYRMYSYVTEELPQLINANFPVDPQRMSIF--GHSMGGHGALICALKNPGKYKSVSAFAP 174 (282)
T ss_dssp TCBCCSTTHHHHCBHHHHHHTHHHHHHHHHSSEEEEEEEEE--EETHHHHHHHHHHHTSTTTSSCEEEESC
T ss_pred ccccCcccccchhhHHHHHHHHHHHHHHHHcCCCccceEEE--EECchHHHHHHHHHhCcccceEEEEeCC
Confidence 00000 01 1224456666666 44443 335555 77765 5678888999999999998854
|
| >3h2g_A Esterase; xanthomonas oryzae PV. oryzae, cell WALL degrading enzyme, RICE, virulence, innate immune responses, pathogenesis; 1.86A {Xanthomonas oryzae PV} PDB: 3h2j_A 3h2k_A* 3h2h_A 3h2i_A | Back alignment and structure |
|---|
Probab=99.61 E-value=7.3e-15 Score=131.87 Aligned_cols=92 Identities=14% Similarity=0.198 Sum_probs=63.6
Q ss_pred CCceEEEEcCCCCCCcc-----------chhhHHHhhhCCCeEEEeCCCCCCCCCCCCCCCCCC---CCCHHHHHHHHHH
Q 022534 34 RLGTIVFLHGAPSHSYS-----------YRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDF---DFTENEFHEELDK 99 (295)
Q Consensus 34 ~~~~vv~lHG~~~~~~~-----------w~~~~~~l~~~~~~via~Dl~G~G~S~~~~~~~~~~---~~~~~~~~~~l~~ 99 (295)
+.|+||++||++++... |..++..|+++||+|+++|+||||.|+.....+... .....++++++..
T Consensus 78 ~~P~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~V~~~D~~G~G~s~~~~~~~~~~~~~~~~~~d~~~~~~~ 157 (397)
T 3h2g_A 78 PYPLLGWGHPTEALRAQEQAKEIRDAKGDDPLVTRLASQGYVVVGSDYLGLGKSNYAYHPYLHSASEASATIDAMRAARS 157 (397)
T ss_dssp CEEEEEEECCCCCBTTCCHHHHHHHTTTCSHHHHTTGGGTCEEEEECCTTSTTCCCSSCCTTCHHHHHHHHHHHHHHHHH
T ss_pred CCcEEEEeCCCcCCCCcccccccccccchHHHHHHHHHCCCEEEEecCCCCCCCCCCccchhhhhhHHHHHHHHHHHHHH
Confidence 35789999999887654 778888888889999999999999997543221000 0123456677777
Q ss_pred HHHHhCCC--CceEEEEecccchH-HHHHHH
Q 022534 100 LLDVLEVK--YPFFLVVQGFLVGS-YGLTWA 127 (295)
Q Consensus 100 ~~~~l~~~--~~~~lv~~G~~~G~-~~~~~a 127 (295)
+++++++. .+++++ |||+|+ +++..|
T Consensus 158 ~~~~~~~~~~~~i~l~--G~S~GG~~a~~~a 186 (397)
T 3h2g_A 158 VLQHLKTPLSGKVMLS--GYSQGGHTAMATQ 186 (397)
T ss_dssp HHHHHTCCEEEEEEEE--EETHHHHHHHHHH
T ss_pred HHHhcCCCCCCcEEEE--EECHHHHHHHHHH
Confidence 88887772 456666 777765 444443
|
| >3icv_A Lipase B, CALB; circular permutation, cleavage on PAIR of basic residues, glycoprotein, hydrolase, lipid degradation, zymogen, disulf; HET: NAG BTB; 1.49A {Candida antarctica} PDB: 3icw_A* | Back alignment and structure |
|---|
Probab=99.58 E-value=3.6e-15 Score=128.58 Aligned_cols=100 Identities=13% Similarity=0.167 Sum_probs=78.1
Q ss_pred CceEEEEcCCCCCC-ccch-hhHHHhhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCceEE
Q 022534 35 LGTIVFLHGAPSHS-YSYR-NVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEELDKLLDVLEVKYPFFL 112 (295)
Q Consensus 35 ~~~vv~lHG~~~~~-~~w~-~~~~~l~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~~l 112 (295)
+++|||+||++++. ..|. .+++.|+++||+|+++|+||||.++.. .+.+++.+.+..++++.+.++ ++|
T Consensus 65 ~~pVVLvHG~~~~~~~~w~~~l~~~L~~~Gy~V~a~DlpG~G~~~~~--------~~~~~la~~I~~l~~~~g~~~-v~L 135 (316)
T 3icv_A 65 SKPILLVPGTGTTGPQSFDSNWIPLSAQLGYTPCWISPPPFMLNDTQ--------VNTEYMVNAITTLYAGSGNNK-LPV 135 (316)
T ss_dssp SSEEEEECCTTCCHHHHHTTTHHHHHHHTTCEEEEECCTTTTCSCHH--------HHHHHHHHHHHHHHHHTTSCC-EEE
T ss_pred CCeEEEECCCCCCcHHHHHHHHHHHHHHCCCeEEEecCCCCCCCcHH--------HHHHHHHHHHHHHHHHhCCCc-eEE
Confidence 56999999999987 6898 899999888999999999999987631 134567788888888888765 667
Q ss_pred EEecccchHHHHHHHH-hC---cCccceeEEEcCCCC
Q 022534 113 VVQGFLVGSYGLTWAL-KN---PSRISKLAILNSPLT 145 (295)
Q Consensus 113 v~~G~~~G~~~~~~a~-~~---p~~v~~lil~~~p~~ 145 (295)
| |||+|++...+++ .+ |++|+++|++++|..
T Consensus 136 V--GHSmGGlvA~~al~~~p~~~~~V~~lV~lapp~~ 170 (316)
T 3icv_A 136 L--TWSQGGLVAQWGLTFFPSIRSKVDRLMAFAPDYK 170 (316)
T ss_dssp E--EETHHHHHHHHHHHHCGGGTTTEEEEEEESCCTT
T ss_pred E--EECHHHHHHHHHHHhccccchhhceEEEECCCCC
Confidence 7 7788764334444 44 589999999987654
|
| >2uz0_A Esterase, tributyrin esterase; alpha/beta hydrolase, hydrolase, A virulence facto LUNG infection; HET: MSE; 1.7A {Streptococcus pneumoniae} | Back alignment and structure |
|---|
Probab=99.58 E-value=1.6e-13 Score=115.29 Aligned_cols=103 Identities=21% Similarity=0.312 Sum_probs=75.5
Q ss_pred CCceEEEEcCCCCCCccchh--hHHHhh-hCCCeEEEeCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh----CC
Q 022534 34 RLGTIVFLHGAPSHSYSYRN--VMSQMS-DAGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEELDKLLDVL----EV 106 (295)
Q Consensus 34 ~~~~vv~lHG~~~~~~~w~~--~~~~l~-~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~l~~~~~~l----~~ 106 (295)
+.|+||++||++++...|.. .+..+. +.++.|+++|.+++|.++.+.. .. ..+.+++++.++++.. +.
T Consensus 40 ~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~----~~-~~~~~~~~~~~~i~~~~~~~~~ 114 (263)
T 2uz0_A 40 DIPVLYLLHGMSGNHNSWLKRTNVERLLRGTNLIVVMPNTSNGWYTDTQYG----FD-YYTALAEELPQVLKRFFPNMTS 114 (263)
T ss_dssp CBCEEEEECCTTCCTTHHHHHSCHHHHTTTCCCEEEECCCTTSTTSBCTTS----CB-HHHHHHTHHHHHHHHHCTTBCC
T ss_pred CCCEEEEECCCCCCHHHHHhccCHHHHHhcCCeEEEEECCCCCccccCCCc----cc-HHHHHHHHHHHHHHHHhccccC
Confidence 45789999999999999988 566664 3588999999999888775421 11 2456778888888874 22
Q ss_pred C-CceEEEEecccch-HHHHHHHHhCcCccceeEEEcCCC
Q 022534 107 K-YPFFLVVQGFLVG-SYGLTWALKNPSRISKLAILNSPL 144 (295)
Q Consensus 107 ~-~~~~lv~~G~~~G-~~~~~~a~~~p~~v~~lil~~~p~ 144 (295)
+ +++.++ |||+| .+++.+|. +|+++++++++++..
T Consensus 115 ~~~~i~l~--G~S~Gg~~a~~~a~-~~~~~~~~v~~~~~~ 151 (263)
T 2uz0_A 115 KREKTFIA--GLSMGGYGCFKLAL-TTNRFSHAASFSGAL 151 (263)
T ss_dssp CGGGEEEE--EETHHHHHHHHHHH-HHCCCSEEEEESCCC
T ss_pred CCCceEEE--EEChHHHHHHHHHh-CccccceEEEecCCc
Confidence 2 346666 77766 46777788 999999999886443
|
| >1ys1_X Lipase; CIS peptide Leu 234, Ca2+ ION, inhibitor hexylphosphonic acid (R) 2-methyl-3-phenylpropyl ester, hydrolase; HET: 2HR; 1.10A {Burkholderia cepacia} PDB: 1ys2_X* 4lip_D 1hqd_A 2lip_A 1oil_A* 3lip_A 2nw6_A 5lip_A* 1cvl_A 2es4_A 1tah_B 1qge_D 1qge_E | Back alignment and structure |
|---|
Probab=99.57 E-value=1.6e-14 Score=125.90 Aligned_cols=101 Identities=16% Similarity=0.264 Sum_probs=85.0
Q ss_pred CceEEEEcCCCCCC------ccchhhHHHhhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCC
Q 022534 35 LGTIVFLHGAPSHS------YSYRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEELDKLLDVLEVKY 108 (295)
Q Consensus 35 ~~~vv~lHG~~~~~------~~w~~~~~~l~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~ 108 (295)
+++|||+||++++. ..|..+++.|.++||+|+++|+||||.|+.+. .+.+++++++.++++.++.+
T Consensus 8 ~~~vVlvHG~~~~~~~~~~~~~w~~l~~~L~~~G~~V~~~d~~g~g~s~~~~-------~~~~~l~~~i~~~l~~~~~~- 79 (320)
T 1ys1_X 8 RYPIILVHGLTGTDKYAGVLEYWYGIQEDLQQRGATVYVANLSGFQSDDGPN-------GRGEQLLAYVKTVLAATGAT- 79 (320)
T ss_dssp SSCEEEECCTTCCSEETTTEESSTTHHHHHHHTTCCEEECCCCSSCCSSSTT-------SHHHHHHHHHHHHHHHHCCS-
T ss_pred CCEEEEECCCCCCccccchHHHHHHHHHHHHhCCCEEEEEcCCCCCCCCCCC-------CCHHHHHHHHHHHHHHhCCC-
Confidence 57999999999887 78999999999889999999999999997542 25688999999999999876
Q ss_pred ceEEEEecccchH-HHHHHHHhCcCccceeEEEcCCCC
Q 022534 109 PFFLVVQGFLVGS-YGLTWALKNPSRISKLAILNSPLT 145 (295)
Q Consensus 109 ~~~lv~~G~~~G~-~~~~~a~~~p~~v~~lil~~~p~~ 145 (295)
+++++ |||+|+ ++..++.++|++|+++|++++|..
T Consensus 80 ~v~lv--GHS~GG~va~~~a~~~p~~V~~lV~i~~p~~ 115 (320)
T 1ys1_X 80 KVNLV--GHSQGGLTSRYVAAVAPDLVASVTTIGTPHR 115 (320)
T ss_dssp CEEEE--EETHHHHHHHHHHHHCGGGEEEEEEESCCTT
T ss_pred CEEEE--EECHhHHHHHHHHHhChhhceEEEEECCCCC
Confidence 47777 677765 566777889999999999987543
|
| >2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major} | Back alignment and structure |
|---|
Probab=99.55 E-value=3.3e-14 Score=137.71 Aligned_cols=230 Identities=12% Similarity=0.059 Sum_probs=128.6
Q ss_pred CcEEEEEEEcCC----CCCCCceEEEEcCCCCCCc--cchhhHHHhhhCCCeEEEeCCCCCCCCCCCC---CC-CCCCCC
Q 022534 19 GEYRWFVRETGS----ADSRLGTIVFLHGAPSHSY--SYRNVMSQMSDAGFHCFAPDWLGFGFSDKPE---KG-YDDFDF 88 (295)
Q Consensus 19 ~~~~~~~~~~g~----~~~~~~~vv~lHG~~~~~~--~w~~~~~~l~~~~~~via~Dl~G~G~S~~~~---~~-~~~~~~ 88 (295)
+|..+++...-+ .+.+.|+||++||++++.. .|......|+++||.|+++|+||+|.+...- .. ......
T Consensus 489 dG~~i~~~l~~p~~~~~~~~~P~vl~~HGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~RG~g~~G~~~~~~~~~~~~~~~ 568 (751)
T 2xe4_A 489 DQTKIPLSVVYHKDLDMSQPQPCMLYGYGSYGLSMDPQFSIQHLPYCDRGMIFAIAHIRGGSELGRAWYEIGAKYLTKRN 568 (751)
T ss_dssp TCCEEEEEEEEETTSCTTSCCCEEEECCCCTTCCCCCCCCGGGHHHHTTTCEEEEECCTTSCTTCTHHHHTTSSGGGTHH
T ss_pred CCcEEEEEEEcCCCCCCCCCccEEEEECCCCCcCCCCcchHHHHHHHhCCcEEEEEeeCCCCCcCcchhhccccccccCc
Confidence 566666543321 1234689999999877554 5777778888889999999999999875321 00 000012
Q ss_pred CHHHHHHHHHHHHHHhCCC-CceEEEEecccchH-HHHHHHHhCcCccceeEEEcCCCCCCCCCchhhhhhhcccchhhh
Q 022534 89 TENEFHEELDKLLDVLEVK-YPFFLVVQGFLVGS-YGLTWALKNPSRISKLAILNSPLTASSPLPGLFQQLRIPLLGEFT 166 (295)
Q Consensus 89 ~~~~~~~~l~~~~~~l~~~-~~~~lv~~G~~~G~-~~~~~a~~~p~~v~~lil~~~p~~~~~~~~~~~~~~~~~~~~~~~ 166 (295)
..++++..+..+++.-..+ ..+.++ |+|.|+ +++.++.++|++++++|+.. |... .......+... +
T Consensus 569 ~~~D~~~~~~~l~~~~~~d~~ri~i~--G~S~GG~la~~~a~~~p~~~~a~v~~~-~~~d------~~~~~~~~~~~-~- 637 (751)
T 2xe4_A 569 TFSDFIAAAEFLVNAKLTTPSQLACE--GRSAGGLLMGAVLNMRPDLFKVALAGV-PFVD------VMTTMCDPSIP-L- 637 (751)
T ss_dssp HHHHHHHHHHHHHHTTSCCGGGEEEE--EETHHHHHHHHHHHHCGGGCSEEEEES-CCCC------HHHHHTCTTST-T-
T ss_pred cHHHHHHHHHHHHHCCCCCcccEEEE--EECHHHHHHHHHHHhCchheeEEEEeC-Ccch------HHhhhcccCcc-c-
Confidence 3455666666555542121 235555 667654 56677778999999988774 3321 00000000000 0
Q ss_pred hhhHHHHHHHHHhCCCccccccccccccccccccCCchhHHHHHHHhcchhhhhHhhhcCcCCCCCCCc-EEEEEeCCCC
Q 022534 167 AQNAIMAERFIEAGSPYVLKLDKADVYRLPYLASSGPGFALLEAARKVNFKDISSRIGAGFSSGSWDKP-VLVAWGISDK 245 (295)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P-~l~i~G~~D~ 245 (295)
....+...+.+ ..+ .....+.... .... ..++++| +|+++|++|.
T Consensus 638 -----~~~~~~~~g~p------------------~~~--~~~~~~~~~s---p~~~------~~~~~~Pp~Lii~G~~D~ 683 (751)
T 2xe4_A 638 -----TTGEWEEWGNP------------------NEY--KYYDYMLSYS---PMDN------VRAQEYPNIMVQCGLHDP 683 (751)
T ss_dssp -----HHHHTTTTCCT------------------TSH--HHHHHHHHHC---TGGG------CCSSCCCEEEEEEETTCS
T ss_pred -----chhhHHHcCCC------------------CCH--HHHHHHHhcC---hhhh------hccCCCCceeEEeeCCCC
Confidence 00001000000 000 1111111111 0111 1256887 9999999999
Q ss_pred CCCcchHHHHHhcCCC------CeEEEEecCCCCCCCCCChH--HHHHHHHHHHHh
Q 022534 246 YLPQSVAEEFQKGNPN------VVKLQMIEGAGHMPQEDWPE--KVVDGLRYFFLN 293 (295)
Q Consensus 246 ~~~~~~~~~~~~~~~~------~~~~~~i~~~gH~~~~e~p~--~~~~~i~~fl~~ 293 (295)
.+++..+.++.+.+.. ...+.+++++||....+.++ +..+.+.+||..
T Consensus 684 ~vp~~~~~~~~~~L~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~Fl~~ 739 (751)
T 2xe4_A 684 RVAYWEPAKWVSKLRECKTDNNEILLNIDMESGHFSAKDRYKFWKESAIQQAFVCK 739 (751)
T ss_dssp SSCTHHHHHHHHHHHHHCCSCCCEEEEEETTCCSSCCSSHHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHhcCCCCceEEEEECCCCCCCCcCChhHHHHHHHHHHHHHHH
Confidence 9998888777654432 12345559999998766554 445578888875
|
| >2dst_A Hypothetical protein TTHA1544; conserved hypothetical protein, structural genomics, NPPSFA; 2.00A {Thermus thermophilus} SCOP: c.69.1.39 | Back alignment and structure |
|---|
Probab=99.54 E-value=6e-14 Score=105.92 Aligned_cols=98 Identities=10% Similarity=0.218 Sum_probs=79.0
Q ss_pred eeEEeCcEEEEEEEcCCCCCCCceEEEEcCCCCCCccchhhHHHhhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCCHHHH
Q 022534 14 SYIKSGEYRWFVRETGSADSRLGTIVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEF 93 (295)
Q Consensus 14 ~~~~~~~~~~~~~~~g~~~~~~~~vv~lHG~~~~~~~w~~~~~~l~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~ 93 (295)
.+++.+|.+++|...|+ +|+|||+| ++...|..+ |++ +|+|+++|+||||.|+.+.. . .+++
T Consensus 5 ~~~~~~g~~~~~~~~g~----~~~vv~~H---~~~~~~~~~---l~~-~~~v~~~d~~G~G~s~~~~~-----~--~~~~ 66 (131)
T 2dst_A 5 GYLHLYGLNLVFDRVGK----GPPVLLVA---EEASRWPEA---LPE-GYAFYLLDLPGYGRTEGPRM-----A--PEEL 66 (131)
T ss_dssp EEEEETTEEEEEEEECC----SSEEEEES---SSGGGCCSC---CCT-TSEEEEECCTTSTTCCCCCC-----C--HHHH
T ss_pred EEEEECCEEEEEEEcCC----CCeEEEEc---CCHHHHHHH---HhC-CcEEEEECCCCCCCCCCCCC-----C--HHHH
Confidence 56788999999988775 35899999 666778776 765 69999999999999987532 1 6889
Q ss_pred HHHHHHHHHHhCCCCceEEEEecccch-HHHHHHHHhCcC
Q 022534 94 HEELDKLLDVLEVKYPFFLVVQGFLVG-SYGLTWALKNPS 132 (295)
Q Consensus 94 ~~~l~~~~~~l~~~~~~~lv~~G~~~G-~~~~~~a~~~p~ 132 (295)
++++.++++.++.++ ++++ |||+| .++..+|.++|.
T Consensus 67 ~~~~~~~~~~~~~~~-~~lv--G~S~Gg~~a~~~a~~~p~ 103 (131)
T 2dst_A 67 AHFVAGFAVMMNLGA-PWVL--LRGLGLALGPHLEALGLR 103 (131)
T ss_dssp HHHHHHHHHHTTCCS-CEEE--ECGGGGGGHHHHHHTTCC
T ss_pred HHHHHHHHHHcCCCc-cEEE--EEChHHHHHHHHHhcCCc
Confidence 999999999998774 6666 77765 468888889884
|
| >3d59_A Platelet-activating factor acetylhydrolase; secreted protein, alpha/beta-hydrolase-fold, LDL-bound, lipoprotein associated phospholipase A2, LP-PLA2; 1.50A {Homo sapiens} PDB: 3d5e_A 3f97_A* 3f98_A 3f9c_A* 3f96_A* | Back alignment and structure |
|---|
Probab=99.54 E-value=6.6e-15 Score=131.53 Aligned_cols=44 Identities=20% Similarity=0.257 Sum_probs=40.8
Q ss_pred CCceEEEEcCCCCCCccchhhHHHhhhCCCeEEEeCCCCCCCCC
Q 022534 34 RLGTIVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGFGFSD 77 (295)
Q Consensus 34 ~~~~vv~lHG~~~~~~~w~~~~~~l~~~~~~via~Dl~G~G~S~ 77 (295)
+.|+|||+||++++...|..+++.|+++||.|+++|+||+|.|.
T Consensus 97 ~~P~Vv~~HG~~~~~~~~~~~a~~La~~Gy~V~~~d~~g~g~s~ 140 (383)
T 3d59_A 97 KYPLVVFSHGLGAFRTLYSAIGIDLASHGFIVAAVEHRDRSASA 140 (383)
T ss_dssp CEEEEEEECCTTCCTTTTHHHHHHHHHTTCEEEEECCCSSCSSE
T ss_pred CCCEEEEcCCCCCCchHHHHHHHHHHhCceEEEEeccCCCCccc
Confidence 35789999999999999999999999889999999999999885
|
| >4b6g_A Putative esterase; hydrolase, formaldehyde detoxification, alpha/beta serine HY; 1.40A {Neisseria meningitidis MC58} | Back alignment and structure |
|---|
Probab=99.54 E-value=1.3e-13 Score=117.49 Aligned_cols=122 Identities=16% Similarity=0.162 Sum_probs=76.2
Q ss_pred CcEEEEEEEcCCC---CCCCceEEEEcCCCCCCccch---hhHHHhhhCCCeEEEeCCCCCCCCCCCC------------
Q 022534 19 GEYRWFVRETGSA---DSRLGTIVFLHGAPSHSYSYR---NVMSQMSDAGFHCFAPDWLGFGFSDKPE------------ 80 (295)
Q Consensus 19 ~~~~~~~~~~g~~---~~~~~~vv~lHG~~~~~~~w~---~~~~~l~~~~~~via~Dl~G~G~S~~~~------------ 80 (295)
.+..+.+..+-+. +.+.|+||++||++++...|. .+...+++.+|.|+++|.+++|.+....
T Consensus 32 ~~~~~~~~v~~P~~~~~~~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~g~~vv~~d~~~rg~~~~~~~~~~~G~g~~~~ 111 (283)
T 4b6g_A 32 LQCEMKFAVYLPNNPENRPLGVIYWLSGLTCTEQNFITKSGFQRYAAEHQVIVVAPDTSPRGEQVPNDDAYDLGQSAGFY 111 (283)
T ss_dssp TTEEEEEEEEECCCTTCCCEEEEEEECCTTCCSHHHHHHSCTHHHHHHHTCEEEEECSSCCSTTSCCCSSTTSBTTBCTT
T ss_pred hCCceEEEEEeCCCCCCCCCCEEEEEcCCCCCccchhhcccHHHHHhhCCeEEEEeccccccccccccccccccCCCccc
Confidence 3555555555433 234689999999999888884 3445565668999999987444322110
Q ss_pred --CCCC--CCCCC-HHHHHHHHHHHHHHh-CCCCceEEEEecccch-HHHHHHHHhCcCccceeEEEcC
Q 022534 81 --KGYD--DFDFT-ENEFHEELDKLLDVL-EVKYPFFLVVQGFLVG-SYGLTWALKNPSRISKLAILNS 142 (295)
Q Consensus 81 --~~~~--~~~~~-~~~~~~~l~~~~~~l-~~~~~~~lv~~G~~~G-~~~~~~a~~~p~~v~~lil~~~ 142 (295)
.... ...+. .+..++++..++++. ...+.+.++ |+|+| .+++.+|.++|+++++++++++
T Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~--G~S~GG~~a~~~a~~~p~~~~~~~~~s~ 178 (283)
T 4b6g_A 112 LNATEQPWAANYQMYDYILNELPRLIEKHFPTNGKRSIM--GHSMGGHGALVLALRNQERYQSVSAFSP 178 (283)
T ss_dssp SBCCSTTGGGTCBHHHHHHTHHHHHHHHHSCEEEEEEEE--EETHHHHHHHHHHHHHGGGCSCEEEESC
T ss_pred ccCccCcccchhhHHHHHHHHHHHHHHHhCCCCCCeEEE--EEChhHHHHHHHHHhCCccceeEEEECC
Confidence 0000 00111 233456777777765 222345555 77776 5678888999999999998853
|
| >1lns_A X-prolyl dipeptidyl aminopetidase; alpha beta hydrolase fold; 2.20A {Lactococcus lactis} SCOP: a.40.2.1 b.18.1.13 c.69.1.21 | Back alignment and structure |
|---|
Probab=99.53 E-value=2e-12 Score=124.85 Aligned_cols=211 Identities=13% Similarity=0.097 Sum_probs=113.6
Q ss_pred HHHhhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCC-------------------CCceEEEEe
Q 022534 55 MSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEELDKLLDVLEV-------------------KYPFFLVVQ 115 (295)
Q Consensus 55 ~~~l~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~-------------------~~~~~lv~~ 115 (295)
.+.|+++||.|+++|+||||.|+..... +.. +.++|+.++++.+.. +..+.++
T Consensus 274 ~~~la~~GYaVv~~D~RG~G~S~G~~~~-----~~~-~e~~D~~a~IdwL~~~~~~~~d~~~~~~v~q~~~~grVgl~-- 345 (763)
T 1lns_A 274 NDYFLTRGFASIYVAGVGTRSSDGFQTS-----GDY-QQIYSMTAVIDWLNGRARAYTSRKKTHEIKASWANGKVAMT-- 345 (763)
T ss_dssp HHHHHTTTCEEEEECCTTSTTSCSCCCT-----TSH-HHHHHHHHHHHHHTTSSCEESSTTCCCEECCTTEEEEEEEE--
T ss_pred HHHHHHCCCEEEEECCCcCCCCCCcCCC-----CCH-HHHHHHHHHHHHHhhcccccccccccccccccCCCCcEEEE--
Confidence 4678888999999999999999875321 232 467888888887752 1235555
Q ss_pred cccch-HHHHHHHHhCcCccceeEEEcCCCCCCCCCchhhhhhh-cccchhhhhhh-HHHHHHHHHhCCCccccccc---
Q 022534 116 GFLVG-SYGLTWALKNPSRISKLAILNSPLTASSPLPGLFQQLR-IPLLGEFTAQN-AIMAERFIEAGSPYVLKLDK--- 189 (295)
Q Consensus 116 G~~~G-~~~~~~a~~~p~~v~~lil~~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~--- 189 (295)
|+|.| .+++.+|+.+|++++++|..++.... ........ ........... ..+...... . .+....
T Consensus 346 G~SyGG~ial~~Aa~~p~~lkaiV~~~~~~d~----~~~~~~~g~~~~~~g~~~~~~~~l~~~~~~---~-~~~~g~~~~ 417 (763)
T 1lns_A 346 GKSYLGTMAYGAATTGVEGLELILAEAGISSW----YNYYRENGLVRSPGGFPGEDLDVLAALTYS---R-NLDGADFLK 417 (763)
T ss_dssp EETHHHHHHHHHHTTTCTTEEEEEEESCCSBH----HHHHBSSSSBCCCTTCTTCCHHHHHHHHCG---G-GGSHHHHHH
T ss_pred EECHHHHHHHHHHHhCCcccEEEEEecccccH----HHHhhhcchhhhcccCCchhhhHHhHHHHh---h-hcCcchhhh
Confidence 67765 46777888999999999887543210 00000000 00000000000 000000000 0 000000
Q ss_pred -ccccc-----cc--ccccCCchhHHHHHHHhcchhhhhHhhhcCcCCCCCCCcEEEEEeCCCCCCCcchHHHHHhcCCC
Q 022534 190 -ADVYR-----LP--YLASSGPGFALLEAARKVNFKDISSRIGAGFSSGSWDKPVLVAWGISDKYLPQSVAEEFQKGNPN 261 (295)
Q Consensus 190 -~~~~~-----~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~ 261 (295)
...+. +. ..........++ ...+ .... ..++++|+|+|+|.+|..+++..+.++++.++.
T Consensus 418 ~~~~~~~~~~~~~~~~~~~~~~~~~~w---~~~s---~~~~------l~~I~~PvLii~G~~D~~vp~~~a~~l~~al~~ 485 (763)
T 1lns_A 418 GNAEYEKRLAEMTAALDRKSGDYNQFW---HDRN---YLIN------TDKVKADVLIVHGLQDWNVTPEQAYNFWKALPE 485 (763)
T ss_dssp HHHHHHHHHHHHHHHHCTTTCCCCHHH---HTTB---GGGG------GGGCCSEEEEEEETTCCSSCTHHHHHHHHHSCT
T ss_pred HHHHHHHHHHHHHhhhhhccCchhHHh---hccC---hhhH------hhcCCCCEEEEEECCCCCCChHHHHHHHHhhcc
Confidence 00000 00 000000000000 0000 1111 136789999999999999999888888888763
Q ss_pred -CeEEEEecCCCCCCCCC-ChHHHHHHHHHHHHh
Q 022534 262 -VVKLQMIEGAGHMPQED-WPEKVVDGLRYFFLN 293 (295)
Q Consensus 262 -~~~~~~i~~~gH~~~~e-~p~~~~~~i~~fl~~ 293 (295)
..+..++.++||..+.+ .+..+.+.+.+||..
T Consensus 486 ~~~~~l~i~~~gH~~~~~~~~~~~~~~i~~Ffd~ 519 (763)
T 1lns_A 486 GHAKHAFLHRGAHIYMNSWQSIDFSETINAYFVA 519 (763)
T ss_dssp TCCEEEEEESCSSCCCTTBSSCCHHHHHHHHHHH
T ss_pred CCCeEEEEeCCcccCccccchHHHHHHHHHHHHH
Confidence 12345567899997655 566788888888875
|
| >3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A* | Back alignment and structure |
|---|
Probab=99.53 E-value=3.4e-13 Score=129.50 Aligned_cols=228 Identities=13% Similarity=0.046 Sum_probs=123.8
Q ss_pred CcEEEEEEEcCCC----CCCCceEEEEcCCCCCC--ccchhhHHHhhhCCCeEEEeCCCCCCCCCCCC--CCC-CCCCCC
Q 022534 19 GEYRWFVRETGSA----DSRLGTIVFLHGAPSHS--YSYRNVMSQMSDAGFHCFAPDWLGFGFSDKPE--KGY-DDFDFT 89 (295)
Q Consensus 19 ~~~~~~~~~~g~~----~~~~~~vv~lHG~~~~~--~~w~~~~~~l~~~~~~via~Dl~G~G~S~~~~--~~~-~~~~~~ 89 (295)
+|..+.+....+. +.+.|+||++||+++.. ..|...+..|+++||.|+++|+||+|.+...- ... ......
T Consensus 434 dg~~i~~~l~~p~~~~~~~~~P~ll~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~RG~g~~g~~~~~~~~~~~~~~~ 513 (693)
T 3iuj_A 434 DGTRVPLIISYRKGLKLDGSNPTILYGYGGFDVSLTPSFSVSVANWLDLGGVYAVANLRGGGEYGQAWHLAGTQQNKQNV 513 (693)
T ss_dssp TSCEEEEEEEEESSCCCSSCCCEEEECCCCTTCCCCCCCCHHHHHHHHTTCEEEEECCTTSSTTCHHHHHTTSGGGTHHH
T ss_pred CCcEEEEEEEecCCCCCCCCccEEEEECCCCCcCCCCccCHHHHHHHHCCCEEEEEeCCCCCccCHHHHHhhhhhcCCCc
Confidence 5666665444221 23468999999986644 45667677787789999999999999775311 000 000001
Q ss_pred HHHHHHHHHHHHHHhCCC-CceEEEEecccchH-HHHHHHHhCcCccceeEEEcCCCCCCCCCchhhhhhhcccchhhhh
Q 022534 90 ENEFHEELDKLLDVLEVK-YPFFLVVQGFLVGS-YGLTWALKNPSRISKLAILNSPLTASSPLPGLFQQLRIPLLGEFTA 167 (295)
Q Consensus 90 ~~~~~~~l~~~~~~l~~~-~~~~lv~~G~~~G~-~~~~~a~~~p~~v~~lil~~~p~~~~~~~~~~~~~~~~~~~~~~~~ 167 (295)
.+++...+..+++.-..+ ..+.++ |+|.|+ +++.++.++|++++++|+.. |...... ...... .
T Consensus 514 ~~D~~~~~~~l~~~~~~d~~ri~i~--G~S~GG~la~~~~~~~p~~~~a~v~~~-~~~d~~~----~~~~~~---~---- 579 (693)
T 3iuj_A 514 FDDFIAAAEYLKAEGYTRTDRLAIR--GGSNGGLLVGAVMTQRPDLMRVALPAV-GVLDMLR----YHTFTA---G---- 579 (693)
T ss_dssp HHHHHHHHHHHHHTTSCCGGGEEEE--EETHHHHHHHHHHHHCTTSCSEEEEES-CCCCTTT----GGGSGG---G----
T ss_pred HHHHHHHHHHHHHcCCCCcceEEEE--EECHHHHHHHHHHhhCccceeEEEecC-Ccchhhh----hccCCC---c----
Confidence 234444444444431122 235554 667654 56677788999999988764 4322110 000000 0
Q ss_pred hhHHHHHHHHHhCCCccccccccccccccccccCCchhHHHHHHHhcchhhhhHhhhcCcCCCC-CCCc-EEEEEeCCCC
Q 022534 168 QNAIMAERFIEAGSPYVLKLDKADVYRLPYLASSGPGFALLEAARKVNFKDISSRIGAGFSSGS-WDKP-VLVAWGISDK 245 (295)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~P-~l~i~G~~D~ 245 (295)
.. ....+ +.+. .+. .....+.... ....+ .. +++| +|+++|++|.
T Consensus 580 -~~-~~~~~---g~p~------------------~~~-~~~~~~~~~s---p~~~~------~~~~~~Pp~Li~~G~~D~ 626 (693)
T 3iuj_A 580 -TG-WAYDY---GTSA------------------DSE-AMFDYLKGYS---PLHNV------RPGVSYPSTMVTTADHDD 626 (693)
T ss_dssp -GG-CHHHH---CCTT------------------SCH-HHHHHHHHHC---HHHHC------CTTCCCCEEEEEEESSCS
T ss_pred -hh-HHHHc---CCcc------------------CHH-HHHHHHHhcC---HHHhh------cccCCCCceeEEecCCCC
Confidence 00 00000 1110 000 0011111111 11111 13 6787 9999999999
Q ss_pred CCCcchHHHHHhcCC------CCeEEEEecCCCCCCCC--CChHHHHHHHHHHHHh
Q 022534 246 YLPQSVAEEFQKGNP------NVVKLQMIEGAGHMPQE--DWPEKVVDGLRYFFLN 293 (295)
Q Consensus 246 ~~~~~~~~~~~~~~~------~~~~~~~i~~~gH~~~~--e~p~~~~~~i~~fl~~ 293 (295)
.+++..+.++.+.+. ..+++++++++||.... +++.++.+.+.+||..
T Consensus 627 ~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~ 682 (693)
T 3iuj_A 627 RVVPAHSFKFAATLQADNAGPHPQLIRIETNAGHGAGTPVAKLIEQSADIYAFTLY 682 (693)
T ss_dssp SSCTHHHHHHHHHHHHHCCSSSCEEEEEEC-------CHHHHHHHHHHHHHHHHHH
T ss_pred CCChhHHHHHHHHHHhhCCCCCCEEEEEeCCCCCCCcccHHHHHHHHHHHHHHHHH
Confidence 999888877765432 23689999999998765 5677888899999976
|
| >3ebl_A Gibberellin receptor GID1; alpha/beta hydrolase, lipase, gibberellin signaling pathway, hydrolase, nucleus, hydrolase receptor; HET: GA4; 1.90A {Oryza sativa subsp} PDB: 3ed1_A* | Back alignment and structure |
|---|
Probab=99.52 E-value=3.4e-13 Score=119.73 Aligned_cols=215 Identities=13% Similarity=0.123 Sum_probs=112.8
Q ss_pred CCceEEEEcCCCC---CCc--cchhhHHHhhhC-CCeEEEeCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh---
Q 022534 34 RLGTIVFLHGAPS---HSY--SYRNVMSQMSDA-GFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEELDKLLDVL--- 104 (295)
Q Consensus 34 ~~~~vv~lHG~~~---~~~--~w~~~~~~l~~~-~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~l~~~~~~l--- 104 (295)
+.|+||++||++. +.. .|..++..|+.+ ||.|+++|+|+.+....+ ...+|....+..+.+.-
T Consensus 111 ~~Pvvv~~HGGg~~~g~~~~~~~~~~~~~la~~~g~~Vv~~dyR~~p~~~~~--------~~~~D~~~a~~~l~~~~~~~ 182 (365)
T 3ebl_A 111 PFPVIIFFHGGSFVHSSASSTIYDSLCRRFVKLSKGVVVSVNYRRAPEHRYP--------CAYDDGWTALKWVMSQPFMR 182 (365)
T ss_dssp CCEEEEEECCSTTTSCCTTBHHHHHHHHHHHHHHTSEEEEECCCCTTTSCTT--------HHHHHHHHHHHHHHHCTTTE
T ss_pred cceEEEEEcCCccccCCCchhhHHHHHHHHHHHCCCEEEEeeCCCCCCCCCc--------HHHHHHHHHHHHHHhCchhh
Confidence 4689999999753 222 367888888765 999999999976543321 01233333333333221
Q ss_pred -CCC-C-ceEEEEecccch-HHHHHHHHhCcC---ccceeEEEcCCCCCCCCCchhhhhhh-cccchhhhhhhHHHHHHH
Q 022534 105 -EVK-Y-PFFLVVQGFLVG-SYGLTWALKNPS---RISKLAILNSPLTASSPLPGLFQQLR-IPLLGEFTAQNAIMAERF 176 (295)
Q Consensus 105 -~~~-~-~~~lv~~G~~~G-~~~~~~a~~~p~---~v~~lil~~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 176 (295)
+.+ . .++++ |+|+| .+++.+|.+.++ +++++++++ |............... .++.... ........+
T Consensus 183 ~~~d~~~ri~l~--G~S~GG~la~~~a~~~~~~~~~~~g~vl~~-p~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~ 257 (365)
T 3ebl_A 183 SGGDAQARVFLS--GDSSGGNIAHHVAVRAADEGVKVCGNILLN-AMFGGTERTESERRLDGKYFVTLQ--DRDWYWKAY 257 (365)
T ss_dssp ETTTTEEEEEEE--EETHHHHHHHHHHHHHHHTTCCCCEEEEES-CCCCCSSCCHHHHHHTTTSSCCHH--HHHHHHHHH
T ss_pred hCCCCCCcEEEE--eeCccHHHHHHHHHHHHhcCCceeeEEEEc-cccCCCcCChhhhhcCCCcccCHH--HHHHHHHHh
Confidence 222 1 35555 67765 567777777665 799999885 5432211111100000 0110000 000000011
Q ss_pred HHhCCCccccccccccccccccccCCchhHHHHHHHhcchhhhhHhhhcCcCCCCCC-CcEEEEEeCCCCCCCc--chHH
Q 022534 177 IEAGSPYVLKLDKADVYRLPYLASSGPGFALLEAARKVNFKDISSRIGAGFSSGSWD-KPVLVAWGISDKYLPQ--SVAE 253 (295)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~P~l~i~G~~D~~~~~--~~~~ 253 (295)
..... .... +.. ..+......+ ..+. .|+|+++|++|.+++. +..+
T Consensus 258 ~~~~~------~~~~----~~~---------------~p~~~~~~~l------~~~~~pP~Li~~G~~D~l~~~~~~~~~ 306 (365)
T 3ebl_A 258 LPEDA------DRDH----PAC---------------NPFGPNGRRL------GGLPFAKSLIIVSGLDLTCDRQLAYAD 306 (365)
T ss_dssp SCTTC------CTTS----TTT---------------CTTSTTCCCC------TTSCCCCEEEEEETTSTTHHHHHHHHH
T ss_pred CCCCC------CCCC----ccc---------------CCCCCcchhh------ccCCCCCEEEEEcCcccchhHHHHHHH
Confidence 00000 0000 000 0000000000 0112 5899999999987653 2334
Q ss_pred HHHhcCCCCeEEEEecCCCCCCC----CCChHHHHHHHHHHHHh
Q 022534 254 EFQKGNPNVVKLQMIEGAGHMPQ----EDWPEKVVDGLRYFFLN 293 (295)
Q Consensus 254 ~~~~~~~~~~~~~~i~~~gH~~~----~e~p~~~~~~i~~fl~~ 293 (295)
.+.+.-. .++++++++++|..+ .++++++.+.|.+||.+
T Consensus 307 ~L~~~g~-~v~l~~~~g~~H~f~~~~~~~~~~~~~~~i~~Fl~~ 349 (365)
T 3ebl_A 307 ALREDGH-HVKVVQCENATVGFYLLPNTVHYHEVMEEISDFLNA 349 (365)
T ss_dssp HHHHTTC-CEEEEEETTCCTTGGGSSCSHHHHHHHHHHHHHHHH
T ss_pred HHHHCCC-CEEEEEECCCcEEEeccCCCHHHHHHHHHHHHHHHH
Confidence 4444333 479999999999764 56678999999999976
|
| >2x5x_A PHB depolymerase PHAZ7; biopolymers, oxyanion HOLE, hydrolase, biodegradation, catal; HET: PG4; 1.20A {Paucimonas lemoignei} PDB: 2vtv_A* 2x76_A | Back alignment and structure |
|---|
Probab=99.51 E-value=1.6e-14 Score=126.61 Aligned_cols=108 Identities=16% Similarity=0.224 Sum_probs=84.4
Q ss_pred CCceEEEEcCCCC----------CCccc----hhhHHHhhhCCCe---EEEeCCCCCCCCCCCCCCCCCCCCCHHHHHHH
Q 022534 34 RLGTIVFLHGAPS----------HSYSY----RNVMSQMSDAGFH---CFAPDWLGFGFSDKPEKGYDDFDFTENEFHEE 96 (295)
Q Consensus 34 ~~~~vv~lHG~~~----------~~~~w----~~~~~~l~~~~~~---via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~ 96 (295)
.++||||+||+++ +...| ..+++.|.++||+ |+++|+||||.|+.+.... ...+..+++.++
T Consensus 39 ~~~pVVlvHG~~~~~~~~~~~~~~~~~w~~~~~~l~~~L~~~Gy~~~~V~~~D~~g~G~S~~~~~~~-~~~~~~~~l~~~ 117 (342)
T 2x5x_A 39 TKTPVIFIHGNGDNAISFDMPPGNVSGYGTPARSVYAELKARGYNDCEIFGVTYLSSSEQGSAQYNY-HSSTKYAIIKTF 117 (342)
T ss_dssp CSCCEEEECCTTCCGGGGGCCCCCCTTTCCCSSCHHHHHHHTTCCTTSEEEECCSCHHHHTCGGGCC-BCHHHHHHHHHH
T ss_pred CCCeEEEECCcCCCcccccccccccccccccHHHHHHHHHhCCCCCCeEEEEeCCCCCccCCccccC-CHHHHHHHHHHH
Confidence 3568999999998 45689 8999999888998 9999999999987642111 123456778888
Q ss_pred HHHHHHHhCCCCceEEEEecccchH-HHHHHHHhC--cCccceeEEEcCCCC
Q 022534 97 LDKLLDVLEVKYPFFLVVQGFLVGS-YGLTWALKN--PSRISKLAILNSPLT 145 (295)
Q Consensus 97 l~~~~~~l~~~~~~~lv~~G~~~G~-~~~~~a~~~--p~~v~~lil~~~p~~ 145 (295)
+.+++++++.++ ++|| |||+|+ ++..++.++ |++|+++|++++|..
T Consensus 118 I~~l~~~~g~~~-v~LV--GHSmGG~iA~~~a~~~~~p~~V~~lVlla~p~~ 166 (342)
T 2x5x_A 118 IDKVKAYTGKSQ-VDIV--AHSMGVSMSLATLQYYNNWTSVRKFINLAGGIR 166 (342)
T ss_dssp HHHHHHHHTCSC-EEEE--EETHHHHHHHHHHHHHTCGGGEEEEEEESCCTT
T ss_pred HHHHHHHhCCCC-EEEE--EECHHHHHHHHHHHHcCchhhhcEEEEECCCcc
Confidence 888888888764 6777 777764 677777787 999999999987654
|
| >4fhz_A Phospholipase/carboxylesterase; alpha/beta hydrolase superfamily, central beta-STR sheet, flanked alpha helices, hydrolase; 2.01A {Rhodobacter sphaeroides} PDB: 4ftw_A* | Back alignment and structure |
|---|
Probab=99.51 E-value=3.2e-14 Score=121.92 Aligned_cols=179 Identities=22% Similarity=0.264 Sum_probs=112.1
Q ss_pred CCCceEEEEcCCCCCCccchhhHHHhhhC--CCeEEEeCCC------CCCCCCCCCCC--CCCCCCC---HHHHHHHHHH
Q 022534 33 SRLGTIVFLHGAPSHSYSYRNVMSQMSDA--GFHCFAPDWL------GFGFSDKPEKG--YDDFDFT---ENEFHEELDK 99 (295)
Q Consensus 33 ~~~~~vv~lHG~~~~~~~w~~~~~~l~~~--~~~via~Dl~------G~G~S~~~~~~--~~~~~~~---~~~~~~~l~~ 99 (295)
++.|.||||||++++...|..+++.|+.. ++.+++|+=| |+|.+=-.... ....... +....+++.+
T Consensus 64 ~~~plVI~LHG~G~~~~~~~~~~~~l~~~~~~~~~v~P~Ap~~~~~~~~G~~Wfd~~~~~~~~~~~~~~~~~~~~~~l~~ 143 (285)
T 4fhz_A 64 EATSLVVFLHGYGADGADLLGLAEPLAPHLPGTAFVAPDAPEPCRANGFGFQWFPIPWLDGSSETAAAEGMAAAARDLDA 143 (285)
T ss_dssp CCSEEEEEECCTTBCHHHHHTTHHHHGGGSTTEEEEEECCSEECTTSSSCEESSCCHHHHCCCHHHHHHHHHHHHHHHHH
T ss_pred CCCcEEEEEcCCCCCHHHHHHHHHHHHHhCCCeEEEecCCCcccccCCCcccccccccccCcccchhhHHHHHHHHHHHH
Confidence 34678999999999999999888888653 6788888743 45543100000 0000000 1122334444
Q ss_pred HHH----HhCCC-CceEEEEecccch-HHHHHHHHhCcCccceeEEEcCCCCCCCCCchhhhhhhcccchhhhhhhHHHH
Q 022534 100 LLD----VLEVK-YPFFLVVQGFLVG-SYGLTWALKNPSRISKLAILNSPLTASSPLPGLFQQLRIPLLGEFTAQNAIMA 173 (295)
Q Consensus 100 ~~~----~l~~~-~~~~lv~~G~~~G-~~~~~~a~~~p~~v~~lil~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (295)
+++ ..+++ +.++++ |+|.| .+++.+++++|+++.+++.+++ ... .+
T Consensus 144 ~i~~~~~~~~id~~ri~l~--GfS~Gg~~a~~~a~~~p~~~a~vv~~sG-~l~---~~---------------------- 195 (285)
T 4fhz_A 144 FLDERLAEEGLPPEALALV--GFSQGTMMALHVAPRRAEEIAGIVGFSG-RLL---AP---------------------- 195 (285)
T ss_dssp HHHHHHHHHTCCGGGEEEE--EETHHHHHHHHHHHHSSSCCSEEEEESC-CCS---CH----------------------
T ss_pred HHHHHHHHhCCCccceEEE--EeCHHHHHHHHHHHhCcccCceEEEeec-Ccc---Cc----------------------
Confidence 444 34553 235555 77765 5678889999999999988753 110 00
Q ss_pred HHHHHhCCCccccccccccccccccccCCchhHHHHHHHhcchhhhhHhhhcCcCCCCCCCcEEEEEeCCCCCCCcchHH
Q 022534 174 ERFIEAGSPYVLKLDKADVYRLPYLASSGPGFALLEAARKVNFKDISSRIGAGFSSGSWDKPVLVAWGISDKYLPQSVAE 253 (295)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~~~~~~~ 253 (295)
+.. . . . ...+.|++++||++|+++|.+.++
T Consensus 196 ~~~-------------------------------~---------~---~-------~~~~~Pvl~~hG~~D~~Vp~~~~~ 225 (285)
T 4fhz_A 196 ERL-------------------------------A---------E---E-------ARSKPPVLLVHGDADPVVPFADMS 225 (285)
T ss_dssp HHH-------------------------------H---------H---H-------CCCCCCEEEEEETTCSSSCTHHHH
T ss_pred hhh-------------------------------h---------h---h-------hhhcCcccceeeCCCCCcCHHHHH
Confidence 000 0 0 0 012589999999999999998877
Q ss_pred HHHhc---CCCCeEEEEecCCCCCCCCCChHHHHHHHHHHHHh
Q 022534 254 EFQKG---NPNVVKLQMIEGAGHMPQEDWPEKVVDGLRYFFLN 293 (295)
Q Consensus 254 ~~~~~---~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 293 (295)
++.+. ....+++++++++||.. .+++ .+.+.+||++
T Consensus 226 ~~~~~L~~~g~~~~~~~y~g~gH~i---~~~~-l~~~~~fL~~ 264 (285)
T 4fhz_A 226 LAGEALAEAGFTTYGHVMKGTGHGI---APDG-LSVALAFLKE 264 (285)
T ss_dssp HHHHHHHHTTCCEEEEEETTCCSSC---CHHH-HHHHHHHHHH
T ss_pred HHHHHHHHCCCCEEEEEECCCCCCC---CHHH-HHHHHHHHHH
Confidence 65533 33347999999999986 3444 4678889876
|
| >1bu8_A Protein (pancreatic lipase related protein 2); hydrolase, lipid degradation; HET: NAG; 1.80A {Rattus norvegicus} SCOP: b.12.1.2 c.69.1.19 PDB: 2oxe_A* 2pvs_A 1eth_A* | Back alignment and structure |
|---|
Probab=99.50 E-value=8.9e-15 Score=133.18 Aligned_cols=102 Identities=15% Similarity=0.215 Sum_probs=80.4
Q ss_pred CCceEEEEcCCCCCC-ccchh-hHHHhhhC-CCeEEEeCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh----CC
Q 022534 34 RLGTIVFLHGAPSHS-YSYRN-VMSQMSDA-GFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEELDKLLDVL----EV 106 (295)
Q Consensus 34 ~~~~vv~lHG~~~~~-~~w~~-~~~~l~~~-~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~l~~~~~~l----~~ 106 (295)
.+|+||++||++++. ..|.. +++.|.+. +|+|+++|+||||+|+.+.. .++.+.+++++.++++.+ ++
T Consensus 69 ~~p~vvliHG~~~~~~~~w~~~l~~~l~~~~~~~Vi~~D~~G~G~S~~~~~-----~~~~~~~~~dl~~li~~L~~~~g~ 143 (452)
T 1bu8_A 69 DRKTRFIVHGFIDKGEDGWLLDMCKKMFQVEKVNCICVDWRRGSRTEYTQA-----SYNTRVVGAEIAFLVQVLSTEMGY 143 (452)
T ss_dssp TSEEEEEECCSCCTTCTTHHHHHHHHHHTTCCEEEEEEECHHHHSSCHHHH-----HHHHHHHHHHHHHHHHHHHHHHCC
T ss_pred CCCeEEEECCCCCCCCchHHHHHHHHHHhhCCCEEEEEechhcccCchhHh-----HhhHHHHHHHHHHHHHHHHHhcCC
Confidence 357999999999988 78988 66777643 89999999999999984321 224567888999999888 54
Q ss_pred -CCceEEEEecccchH-HHHHHHHhCcCccceeEEEcC
Q 022534 107 -KYPFFLVVQGFLVGS-YGLTWALKNPSRISKLAILNS 142 (295)
Q Consensus 107 -~~~~~lv~~G~~~G~-~~~~~a~~~p~~v~~lil~~~ 142 (295)
..+++|+ |||+|+ +++.+|.++|++|++++++++
T Consensus 144 ~~~~i~Lv--GhSlGg~vA~~~a~~~p~~v~~iv~ldp 179 (452)
T 1bu8_A 144 SPENVHLI--GHSLGAHVVGEAGRRLEGHVGRITGLDP 179 (452)
T ss_dssp CGGGEEEE--EETHHHHHHHHHHHHTTTCSSEEEEESC
T ss_pred CccceEEE--EEChhHHHHHHHHHhcccccceEEEecC
Confidence 2357777 677764 678888899999999999964
|
| >1w52_X Pancreatic lipase related protein 2; detergent, cleaved flap; HET: DDQ; 2.99A {Equus caballus} | Back alignment and structure |
|---|
Probab=99.50 E-value=1e-14 Score=132.82 Aligned_cols=100 Identities=14% Similarity=0.201 Sum_probs=79.7
Q ss_pred CceEEEEcCCCCCC-ccchh-hHHHhhhC-CCeEEEeCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh----C--
Q 022534 35 LGTIVFLHGAPSHS-YSYRN-VMSQMSDA-GFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEELDKLLDVL----E-- 105 (295)
Q Consensus 35 ~~~vv~lHG~~~~~-~~w~~-~~~~l~~~-~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~l~~~~~~l----~-- 105 (295)
+|+||++|||+++. ..|.. +++.|.+. +|+|+++|++|||.|+.+.. .++.+.+++++.++++.+ +
T Consensus 70 ~p~vvliHG~~~~~~~~w~~~~~~~l~~~~~~~Vi~~D~~g~G~S~~~~~-----~~~~~~~~~dl~~~i~~L~~~~g~~ 144 (452)
T 1w52_X 70 RKTHFVIHGFRDRGEDSWPSDMCKKILQVETTNCISVDWSSGAKAEYTQA-----VQNIRIVGAETAYLIQQLLTELSYN 144 (452)
T ss_dssp SCEEEEECCTTCCSSSSHHHHHHHHHHTTSCCEEEEEECHHHHTSCHHHH-----HHHHHHHHHHHHHHHHHHHHHHCCC
T ss_pred CCEEEEEcCCCCCCCchHHHHHHHHHHhhCCCEEEEEecccccccccHHH-----HHhHHHHHHHHHHHHHHHHHhcCCC
Confidence 57999999999988 78987 77888654 89999999999999974321 224567888999998887 5
Q ss_pred CCCceEEEEecccch-HHHHHHHHhCcCccceeEEEcC
Q 022534 106 VKYPFFLVVQGFLVG-SYGLTWALKNPSRISKLAILNS 142 (295)
Q Consensus 106 ~~~~~~lv~~G~~~G-~~~~~~a~~~p~~v~~lil~~~ 142 (295)
.+ +++|+ |||+| .+++.+|.++|++|++++++++
T Consensus 145 ~~-~i~Lv--GhSlGg~vA~~~a~~~p~~v~~iv~ldp 179 (452)
T 1w52_X 145 PE-NVHII--GHSLGAHTAGEAGRRLEGRVGRVTGLDP 179 (452)
T ss_dssp GG-GEEEE--EETHHHHHHHHHHHHTTTCSSEEEEESC
T ss_pred cc-cEEEE--EeCHHHHHHHHHHHhcccceeeEEeccc
Confidence 34 47777 77776 4677888899999999999964
|
| >1ex9_A Lactonizing lipase; alpha-beta hydrolase fold, phosphonate inhibitor; HET: OCP; 2.54A {Pseudomonas aeruginosa} SCOP: c.69.1.18 | Back alignment and structure |
|---|
Probab=99.50 E-value=6.4e-14 Score=120.18 Aligned_cols=98 Identities=14% Similarity=0.186 Sum_probs=81.7
Q ss_pred CceEEEEcCCCCCC-----ccchhhHHHhhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCc
Q 022534 35 LGTIVFLHGAPSHS-----YSYRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEELDKLLDVLEVKYP 109 (295)
Q Consensus 35 ~~~vv~lHG~~~~~-----~~w~~~~~~l~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~ 109 (295)
+++|||+||++++. ..|..+++.|++.||+|+++|+||+|.|+. +.+++++++.++++.++.+ +
T Consensus 7 ~~~vvlvHG~~~~~~~~~~~~~~~~~~~L~~~G~~v~~~d~~g~g~s~~----------~~~~~~~~i~~~~~~~~~~-~ 75 (285)
T 1ex9_A 7 KYPIVLAHGMLGFDNILGVDYWFGIPSALRRDGAQVYVTEVSQLDTSEV----------RGEQLLQQVEEIVALSGQP-K 75 (285)
T ss_dssp SSCEEEECCTTCCSEETTEESSTTHHHHHHHTTCCEEEECCCSSSCHHH----------HHHHHHHHHHHHHHHHCCS-C
T ss_pred CCeEEEeCCCCCCccccccccHHHHHHHHHhCCCEEEEEeCCCCCCchh----------hHHHHHHHHHHHHHHhCCC-C
Confidence 57999999998875 489999999998899999999999998761 4578999999999999766 4
Q ss_pred eEEEEecccchH-HHHHHHHhCcCccceeEEEcCCCC
Q 022534 110 FFLVVQGFLVGS-YGLTWALKNPSRISKLAILNSPLT 145 (295)
Q Consensus 110 ~~lv~~G~~~G~-~~~~~a~~~p~~v~~lil~~~p~~ 145 (295)
++++ |||+|+ ++..++.++|++|+++|++++|..
T Consensus 76 v~lv--GhS~GG~~a~~~a~~~p~~v~~lv~i~~p~~ 110 (285)
T 1ex9_A 76 VNLI--GHSHGGPTIRYVAAVRPDLIASATSVGAPHK 110 (285)
T ss_dssp EEEE--EETTHHHHHHHHHHHCGGGEEEEEEESCCTT
T ss_pred EEEE--EECHhHHHHHHHHHhChhheeEEEEECCCCC
Confidence 7777 677765 566777789999999999987543
|
| >4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi} | Back alignment and structure |
|---|
Probab=99.50 E-value=7.9e-13 Score=126.47 Aligned_cols=228 Identities=14% Similarity=0.030 Sum_probs=126.5
Q ss_pred eCcEEEEEEEcCCC----CCCCceEEEEcCCCCCCcc--chhhH-HHhhhCCCeEEEeCCCCCCCCCCCC--CCC-CCCC
Q 022534 18 SGEYRWFVRETGSA----DSRLGTIVFLHGAPSHSYS--YRNVM-SQMSDAGFHCFAPDWLGFGFSDKPE--KGY-DDFD 87 (295)
Q Consensus 18 ~~~~~~~~~~~g~~----~~~~~~vv~lHG~~~~~~~--w~~~~-~~l~~~~~~via~Dl~G~G~S~~~~--~~~-~~~~ 87 (295)
.+|..+++..+.+. +.+.|+||++||+++.... |.... ..|+++||.|+++|.||+|.+...- ... ....
T Consensus 457 ~DG~~i~~~l~~P~~~~~~~~~P~vl~~HGG~~~~~~~~~~~~~~q~la~~Gy~Vv~~d~RGsg~~G~~~~~~~~~~~~~ 536 (711)
T 4hvt_A 457 FDGVKIPYFLVYKKGIKFDGKNPTLLEAYGGFQVINAPYFSRIKNEVWVKNAGVSVLANIRGGGEFGPEWHKSAQGIKRQ 536 (711)
T ss_dssp TTSCEEEEEEEEETTCCCSSCCCEEEECCCCTTCCCCCCCCHHHHHHTGGGTCEEEEECCTTSSTTCHHHHHTTSGGGTH
T ss_pred CCCeEEEEEEEecCCCCCCCCccEEEEECCCCCCCCCCcccHHHHHHHHHCCCEEEEEeCCCCCCcchhHHHhhhhccCc
Confidence 36777666544322 2346899999998765543 54444 3677789999999999999875310 000 0000
Q ss_pred CCHHHHHHHHHHHHHHhCCC-CceEEEEecccchH-HHHHHHHhCcCccceeEEEcCCCCCCCCCchhhhhhhcccchhh
Q 022534 88 FTENEFHEELDKLLDVLEVK-YPFFLVVQGFLVGS-YGLTWALKNPSRISKLAILNSPLTASSPLPGLFQQLRIPLLGEF 165 (295)
Q Consensus 88 ~~~~~~~~~l~~~~~~l~~~-~~~~lv~~G~~~G~-~~~~~a~~~p~~v~~lil~~~p~~~~~~~~~~~~~~~~~~~~~~ 165 (295)
...+++...+..+++.-..+ ..+.++ |+|.|+ +++.++.++|++++++|... |...... +.. .
T Consensus 537 ~~~~D~~aav~~L~~~~~~d~~rI~i~--G~S~GG~la~~~a~~~pd~f~a~V~~~-pv~D~~~----~~~--~------ 601 (711)
T 4hvt_A 537 TAFNDFFAVSEELIKQNITSPEYLGIK--GGSNGGLLVSVAMTQRPELFGAVACEV-PILDMIR----YKE--F------ 601 (711)
T ss_dssp HHHHHHHHHHHHHHHTTSCCGGGEEEE--EETHHHHHHHHHHHHCGGGCSEEEEES-CCCCTTT----GGG--S------
T ss_pred CcHHHHHHHHHHHHHcCCCCcccEEEE--eECHHHHHHHHHHHhCcCceEEEEEeC-Cccchhh----hhc--c------
Confidence 11234444444444432122 234454 667665 45666778999999888764 4322110 000 0
Q ss_pred hhhhHHHHHHHHHhCCCccccccccccccccccccCCchhHHHHHHHhcchhhhhHhhhcCcCCCCCCC--cEEEEEeCC
Q 022534 166 TAQNAIMAERFIEAGSPYVLKLDKADVYRLPYLASSGPGFALLEAARKVNFKDISSRIGAGFSSGSWDK--PVLVAWGIS 243 (295)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--P~l~i~G~~ 243 (295)
..... ....+ +.+. .+ .....+...+ .... ..++++ |+|+++|++
T Consensus 602 ~~~~~-~~~~~---G~p~------------------~~--~~~~~l~~~S---P~~~------v~~i~~~pPvLii~G~~ 648 (711)
T 4hvt_A 602 GAGHS-WVTEY---GDPE------------------IP--NDLLHIKKYA---PLEN------LSLTQKYPTVLITDSVL 648 (711)
T ss_dssp TTGGG-GHHHH---CCTT------------------SH--HHHHHHHHHC---GGGS------CCTTSCCCEEEEEEETT
T ss_pred ccchH-HHHHh---CCCc------------------CH--HHHHHHHHcC---HHHH------HhhcCCCCCEEEEecCC
Confidence 00000 00011 1110 00 0001111111 0011 124566 999999999
Q ss_pred CCCCCcchHHHHHhcC----CCCeEEEEecCCCCCCCCC--ChHHHHHHHHHHHHh
Q 022534 244 DKYLPQSVAEEFQKGN----PNVVKLQMIEGAGHMPQED--WPEKVVDGLRYFFLN 293 (295)
Q Consensus 244 D~~~~~~~~~~~~~~~----~~~~~~~~i~~~gH~~~~e--~p~~~~~~i~~fl~~ 293 (295)
|..+++..+.++.+.+ ...+++++++++||..... +.....+.+.+||..
T Consensus 649 D~~Vp~~~s~~~~~aL~~~~g~pv~l~~~p~~gHg~~~~~~~~~~~~~~i~~FL~~ 704 (711)
T 4hvt_A 649 DQRVHPWHGRIFEYVLAQNPNTKTYFLESKDSGHGSGSDLKESANYFINLYTFFAN 704 (711)
T ss_dssp CCSSCTHHHHHHHHHHTTCTTCCEEEEEESSCCSSSCSSHHHHHHHHHHHHHHHHH
T ss_pred CCcCChHHHHHHHHHHHHHcCCCEEEEEECCCCCcCcCCcchHHHHHHHHHHHHHH
Confidence 9999998888876555 2347999999999986443 345666777888875
|
| >4ezi_A Uncharacterized protein; alpha-beta hydrolases fold, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.15A {Legionella pneumophila subsp} | Back alignment and structure |
|---|
Probab=99.50 E-value=1e-12 Score=116.88 Aligned_cols=60 Identities=17% Similarity=0.069 Sum_probs=46.3
Q ss_pred CCCCCcEEEEEeCCCCCCCcchHHHHHhcC---CCCeEEEEecC--CCCCCCCCChHHHHHHHHHHHHh
Q 022534 230 GSWDKPVLVAWGISDKYLPQSVAEEFQKGN---PNVVKLQMIEG--AGHMPQEDWPEKVVDGLRYFFLN 293 (295)
Q Consensus 230 ~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~---~~~~~~~~i~~--~gH~~~~e~p~~~~~~i~~fl~~ 293 (295)
.++++|+++++|++|.++|++.+.++.+.. .. ++++.+++ .+|... .......+..||.+
T Consensus 304 ~~~~~Pvli~hG~~D~~Vp~~~~~~l~~~l~~~G~-v~~~~~~~~~~~H~~~---~~~~~~~~~~wl~~ 368 (377)
T 4ezi_A 304 FKPTAPLLLVGTKGDRDVPYAGAEMAYHSFRKYSD-FVWIKSVSDALDHVQA---HPFVLKEQVDFFKQ 368 (377)
T ss_dssp SCCSSCEEEEECTTCSSSCHHHHHHHHHHHHTTCS-CEEEEESCSSCCTTTT---HHHHHHHHHHHHHH
T ss_pred CCCCCCEEEEecCCCCCCCHHHHHHHHHHHHhcCC-EEEEEcCCCCCCccCh---HHHHHHHHHHHHHH
Confidence 367899999999999999998888876543 33 69999999 788643 34556667777765
|
| >3doh_A Esterase; alpha-beta hydrolase, beta sheet; 2.60A {Thermotoga maritima} PDB: 3doi_A | Back alignment and structure |
|---|
Probab=99.48 E-value=1.7e-12 Score=115.63 Aligned_cols=190 Identities=15% Similarity=0.060 Sum_probs=119.0
Q ss_pred CcEEEEEEEcCCCC----CCCceEEEEcCCCCCCccchhh------------HHHhhhCCCeEEEeCCCCCCCCCCCCC-
Q 022534 19 GEYRWFVRETGSAD----SRLGTIVFLHGAPSHSYSYRNV------------MSQMSDAGFHCFAPDWLGFGFSDKPEK- 81 (295)
Q Consensus 19 ~~~~~~~~~~g~~~----~~~~~vv~lHG~~~~~~~w~~~------------~~~l~~~~~~via~Dl~G~G~S~~~~~- 81 (295)
+|..+++..+.+.. .+.|+||++||++++...|... .......++.|+++|.+|.+.......
T Consensus 154 dg~~l~~~v~~P~~~~~~~~~Pvvv~lHG~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~vv~pd~~g~~~~~~~~~~ 233 (380)
T 3doh_A 154 TGVEIPYRLFVPKDVNPDRKYPLVVFLHGAGERGTDNYLQVAGNRGAVVWAQPRYQVVHPCFVLAPQCPPNSSWSTLFTD 233 (380)
T ss_dssp TCCEEEEEEECCSSCCTTSCEEEEEEECCGGGCSSSSSHHHHSSTTTTGGGSHHHHTTSCCEEEEECCCTTCCSBTTTTC
T ss_pred CCcEEEEEEEcCCCCCCCCCccEEEEECCCCCCCCchhhhhhccccceeecCccccccCCEEEEEecCCCCCcccccccc
Confidence 57778887665432 2347899999998665443211 011223468999999998775443111
Q ss_pred --CCCCCCCCHHHHHHHHHHHHHHhCCC-CceEEEEecccchH-HHHHHHHhCcCccceeEEEcCCCCCCCCCchhhhhh
Q 022534 82 --GYDDFDFTENEFHEELDKLLDVLEVK-YPFFLVVQGFLVGS-YGLTWALKNPSRISKLAILNSPLTASSPLPGLFQQL 157 (295)
Q Consensus 82 --~~~~~~~~~~~~~~~l~~~~~~l~~~-~~~~lv~~G~~~G~-~~~~~a~~~p~~v~~lil~~~p~~~~~~~~~~~~~~ 157 (295)
.........++..+.+..+++..+++ ..+.++ |||+|+ +++.+++++|+++++++++++... +
T Consensus 234 ~~~~~~~~~~~~d~~~~i~~~~~~~~~d~~ri~l~--G~S~GG~~a~~~a~~~p~~~~~~v~~sg~~~-----~------ 300 (380)
T 3doh_A 234 RENPFNPEKPLLAVIKIIRKLLDEYNIDENRIYIT--GLSMGGYGTWTAIMEFPELFAAAIPICGGGD-----V------ 300 (380)
T ss_dssp SSCTTSBCHHHHHHHHHHHHHHHHSCEEEEEEEEE--EETHHHHHHHHHHHHCTTTCSEEEEESCCCC-----G------
T ss_pred cccccCCcchHHHHHHHHHHHHHhcCCCcCcEEEE--EECccHHHHHHHHHhCCccceEEEEecCCCC-----h------
Confidence 00011223455667777777776654 235555 777764 677888999999999998753210 0
Q ss_pred hcccchhhhhhhHHHHHHHHHhCCCccccccccccccccccccCCchhHHHHHHHhcchhhhhHhhhcCcCCCCCCCcEE
Q 022534 158 RIPLLGEFTAQNAIMAERFIEAGSPYVLKLDKADVYRLPYLASSGPGFALLEAARKVNFKDISSRIGAGFSSGSWDKPVL 237 (295)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l 237 (295)
.....+ -++|+|
T Consensus 301 ------------------------------------------------------------~~~~~~--------~~~P~l 312 (380)
T 3doh_A 301 ------------------------------------------------------------SKVERI--------KDIPIW 312 (380)
T ss_dssp ------------------------------------------------------------GGGGGG--------TTSCEE
T ss_pred ------------------------------------------------------------hhhhhc--------cCCCEE
Confidence 000000 148999
Q ss_pred EEEeCCCCCCCcchHHHHHhcCC---CCeEEEEecCC--------CCCCCCCChHHHHH--HHHHHHHh
Q 022534 238 VAWGISDKYLPQSVAEEFQKGNP---NVVKLQMIEGA--------GHMPQEDWPEKVVD--GLRYFFLN 293 (295)
Q Consensus 238 ~i~G~~D~~~~~~~~~~~~~~~~---~~~~~~~i~~~--------gH~~~~e~p~~~~~--~i~~fl~~ 293 (295)
+++|++|.+++++.+..+.+.+. ..++++++|++ +|.. ...... .+.+||..
T Consensus 313 ii~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~~~~~h~~h~~~~H~~----~~~~~~~~~i~~wL~~ 377 (380)
T 3doh_A 313 VFHAEDDPVVPVENSRVLVKKLAEIGGKVRYTEYEKGFMEKHGWDPHGS----WIPTYENQEAIEWLFE 377 (380)
T ss_dssp EEEETTCSSSCTHHHHHHHHHHHHTTCCEEEEEECTTHHHHTTCCTTCT----HHHHHTCHHHHHHHHT
T ss_pred EEecCCCCccCHHHHHHHHHHHHHCCCceEEEEecCCcccCCCCCCchh----HHHhcCCHHHHHHHHh
Confidence 99999999999888777765432 24799999999 6642 222333 78888865
|
| >1jjf_A Xylanase Z, endo-1,4-beta-xylanase Z, 1,4-beta-D-xylan; feruloyl esterase, ferulic acid esterase, FAE_XYNZ, XYNZ, structural genomics; 1.75A {Clostridium thermocellum} SCOP: c.69.1.2 PDB: 1jt2_A* | Back alignment and structure |
|---|
Probab=99.44 E-value=2.2e-12 Score=109.08 Aligned_cols=117 Identities=11% Similarity=0.149 Sum_probs=74.5
Q ss_pred CcEEEEEEEcCCC----CCCCceEEEEcCCCCCCccchhh-------HHHhhhC----CCeEEEeCCCCCCCCCCCCCCC
Q 022534 19 GEYRWFVRETGSA----DSRLGTIVFLHGAPSHSYSYRNV-------MSQMSDA----GFHCFAPDWLGFGFSDKPEKGY 83 (295)
Q Consensus 19 ~~~~~~~~~~g~~----~~~~~~vv~lHG~~~~~~~w~~~-------~~~l~~~----~~~via~Dl~G~G~S~~~~~~~ 83 (295)
.+..+.+..+-+. ..+.|+||++||++++...|... ++.|.+. +|.|+++|.+|+|.+...
T Consensus 42 ~~~~~~~~v~~P~~~~~~~~~P~vv~lHG~g~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~vv~~d~~~~~~~~~~---- 117 (268)
T 1jjf_A 42 TNSTRPARVYLPPGYSKDKKYSVLYLLHGIGGSENDWFEGGGRANVIADNLIAEGKIKPLIIVTPNTNAAGPGIAD---- 117 (268)
T ss_dssp TTEEEEEEEEECTTCCTTSCBCEEEEECCTTCCTTTTTTTTTCHHHHHHHHHHTTSSCCCEEEEECCCCCCTTCSC----
T ss_pred cCCceEEEEEeCCCCCCCCCccEEEEECCCCCCcchhhhccccHHHHHHHHHHcCCCCCEEEEEeCCCCCCccccc----
Confidence 3555555444332 23468999999999887777654 6777654 599999999998864311
Q ss_pred CCCCCCHHHHHHHHHHHHH-HhCC---CCceEEEEecccch-HHHHHHHHhCcCccceeEEEcC
Q 022534 84 DDFDFTENEFHEELDKLLD-VLEV---KYPFFLVVQGFLVG-SYGLTWALKNPSRISKLAILNS 142 (295)
Q Consensus 84 ~~~~~~~~~~~~~l~~~~~-~l~~---~~~~~lv~~G~~~G-~~~~~~a~~~p~~v~~lil~~~ 142 (295)
.+....++.++++.++++ .... .+.+.++ |+|+| .+++.++.++|+++++++++++
T Consensus 118 -~~~~~~~~~~~~~~~~l~~~~~~~~d~~~i~l~--G~S~GG~~a~~~a~~~p~~~~~~v~~s~ 178 (268)
T 1jjf_A 118 -GYENFTKDLLNSLIPYIESNYSVYTDREHRAIA--GLSMGGGQSFNIGLTNLDKFAYIGPISA 178 (268)
T ss_dssp -HHHHHHHHHHHTHHHHHHHHSCBCCSGGGEEEE--EETHHHHHHHHHHHTCTTTCSEEEEESC
T ss_pred -cHHHHHHHHHHHHHHHHHhhcCCCCCCCceEEE--EECHHHHHHHHHHHhCchhhhheEEeCC
Confidence 111011233555555555 3343 1345565 77776 4677888899999999988753
|
| >1hpl_A Lipase; hydrolase(carboxylic esterase); 2.30A {Equus caballus} SCOP: b.12.1.2 c.69.1.19 | Back alignment and structure |
|---|
Probab=99.44 E-value=5e-14 Score=127.76 Aligned_cols=100 Identities=15% Similarity=0.221 Sum_probs=76.1
Q ss_pred CceEEEEcCCCCCC-ccchh-hHHHh-hhCCCeEEEeCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh------C
Q 022534 35 LGTIVFLHGAPSHS-YSYRN-VMSQM-SDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEELDKLLDVL------E 105 (295)
Q Consensus 35 ~~~vv~lHG~~~~~-~~w~~-~~~~l-~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~l~~~~~~l------~ 105 (295)
+|++|+||||+++. ..|.. +++.| +..+|+|+++|+||||.|..+.. .++.+.+++++.++++.+ +
T Consensus 69 ~p~vvliHG~~~s~~~~w~~~l~~~ll~~~~~~VI~vD~~g~g~s~y~~~-----~~~~~~v~~~la~ll~~L~~~~g~~ 143 (449)
T 1hpl_A 69 RKTRFIIHGFIDKGEESWLSTMCQNMFKVESVNCICVDWKSGSRTAYSQA-----SQNVRIVGAEVAYLVGVLQSSFDYS 143 (449)
T ss_dssp SEEEEEECCCCCTTCTTHHHHHHHHHHHHCCEEEEEEECHHHHSSCHHHH-----HHHHHHHHHHHHHHHHHHHHHHCCC
T ss_pred CCeEEEEecCCCCCCccHHHHHHHHHHhcCCeEEEEEeCCcccCCccHHH-----HHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 57899999999885 57986 66776 34589999999999999864221 124556777888888766 2
Q ss_pred CCCceEEEEecccch-HHHHHHHHhCcCccceeEEEcC
Q 022534 106 VKYPFFLVVQGFLVG-SYGLTWALKNPSRISKLAILNS 142 (295)
Q Consensus 106 ~~~~~~lv~~G~~~G-~~~~~~a~~~p~~v~~lil~~~ 142 (295)
.+ .++|| |||+| .+|+.+|.++|++|.+++++++
T Consensus 144 ~~-~v~LI--GhSlGg~vA~~~a~~~p~~v~~iv~Ldp 178 (449)
T 1hpl_A 144 PS-NVHII--GHSLGSHAAGEAGRRTNGAVGRITGLDP 178 (449)
T ss_dssp GG-GEEEE--EETHHHHHHHHHHHHTTTCSSEEEEESC
T ss_pred cc-cEEEE--EECHhHHHHHHHHHhcchhcceeeccCc
Confidence 44 46777 77776 4677888899999999998865
|
| >2zyr_A Lipase, putative; fatty acid, hydrolase; HET: 1PE; 1.77A {Archaeoglobus fulgidus} PDB: 2zys_A* 2zyi_A* 2zyh_A* | Back alignment and structure |
|---|
Probab=99.44 E-value=7.2e-14 Score=126.59 Aligned_cols=107 Identities=17% Similarity=0.297 Sum_probs=82.3
Q ss_pred CceEEEEcCCCCCCccchhhHHHhhhCCC---eEEEeCCCCCCCC-----CCCCCCC-----------------------
Q 022534 35 LGTIVFLHGAPSHSYSYRNVMSQMSDAGF---HCFAPDWLGFGFS-----DKPEKGY----------------------- 83 (295)
Q Consensus 35 ~~~vv~lHG~~~~~~~w~~~~~~l~~~~~---~via~Dl~G~G~S-----~~~~~~~----------------------- 83 (295)
+++|||+||++++...|..+++.|+++|| +|+++|+||||+| +.+..+.
T Consensus 22 ~ppVVLlHG~g~s~~~w~~la~~La~~Gy~~~~Via~DlpG~G~S~~~~~Dv~~~G~~~~~G~n~~p~id~~~l~~v~~~ 101 (484)
T 2zyr_A 22 FRPVVFVHGLAGSAGQFESQGMRFAANGYPAEYVKTFEYDTISWALVVETDMLFSGLGSEFGLNISQIIDPETLDKILSK 101 (484)
T ss_dssp CCCEEEECCTTCCGGGGHHHHHHHHHTTCCGGGEEEECCCHHHHHHHTTTSTTTTTGGGHHHHHHGGGSCHHHHHHHHTS
T ss_pred CCEEEEECCCCCCHHHHHHHHHHHHHcCCCcceEEEEECCCCCccccccccccccccccccccccccccccccccccccc
Confidence 57899999999999999999999998899 8999999999987 2110000
Q ss_pred ---CCCCCCHHHHHHHHHHHHHHhCCCCceEEEEecccchH-HHHHHHHhCc---CccceeEEEcCCC
Q 022534 84 ---DDFDFTENEFHEELDKLLDVLEVKYPFFLVVQGFLVGS-YGLTWALKNP---SRISKLAILNSPL 144 (295)
Q Consensus 84 ---~~~~~~~~~~~~~l~~~~~~l~~~~~~~lv~~G~~~G~-~~~~~a~~~p---~~v~~lil~~~p~ 144 (295)
....++.+++++++.+++++++.++ ++++ |||+|+ +++.++.++| ++|+++|++++|.
T Consensus 102 ~~~~~~~~~~~dla~~L~~ll~~lg~~k-V~LV--GHSmGG~IAl~~A~~~Pe~~~~V~~LVlIapp~ 166 (484)
T 2zyr_A 102 SRERLIDETFSRLDRVIDEALAESGADK-VDLV--GHSMGTFFLVRYVNSSPERAAKVAHLILLDGVW 166 (484)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHCCSC-EEEE--EETHHHHHHHHHHHTCHHHHHTEEEEEEESCCC
T ss_pred cccCchhhhHHHHHHHHHHHHHHhCCCC-EEEE--EECHHHHHHHHHHHHCccchhhhCEEEEECCcc
Confidence 0112345677788888888888764 6776 777764 6778888898 4899999998765
|
| >4f21_A Carboxylesterase/phospholipase family protein; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.50A {Francisella tularensis subsp} | Back alignment and structure |
|---|
Probab=99.43 E-value=2.2e-12 Score=108.19 Aligned_cols=192 Identities=15% Similarity=0.222 Sum_probs=114.0
Q ss_pred EEEEEcCCCCCCCceEEEEcCCCCCCccchhhHHHhhhC--CCeEEEeCCC-----------CCCC---CCCCCCCCC-C
Q 022534 23 WFVRETGSADSRLGTIVFLHGAPSHSYSYRNVMSQMSDA--GFHCFAPDWL-----------GFGF---SDKPEKGYD-D 85 (295)
Q Consensus 23 ~~~~~~g~~~~~~~~vv~lHG~~~~~~~w~~~~~~l~~~--~~~via~Dl~-----------G~G~---S~~~~~~~~-~ 85 (295)
+.|....+.++.+.+||||||+|++...|..+++.|... ++++++|+=| |+.+ ......... .
T Consensus 25 l~y~ii~P~~~~~~~VI~LHG~G~~~~dl~~l~~~l~~~~~~~~~i~P~Ap~~~~~~~~~~~~~~Wf~~~~~~~~~~~~~ 104 (246)
T 4f21_A 25 MNYELMEPAKQARFCVIWLHGLGADGHDFVDIVNYFDVSLDEIRFIFPHADIIPVTINMGMQMRAWYDIKSLDANSLNRV 104 (246)
T ss_dssp CCEEEECCSSCCCEEEEEEEC--CCCCCGGGGGGGCCSCCTTEEEEEECGGGSCTTTHHHHHHHSCTTCCCC---CGGGG
T ss_pred cCceEeCCCCcCCeEEEEEcCCCCCHHHHHHHHHHhhhcCCCeEEEeCCCCccccccCCCCCcccccccccccccchhhh
Confidence 334444444455679999999999999999988887632 6788988643 1111 111000000 0
Q ss_pred CC-CCHHHHHHHHHHHHHH---hCCC-CceEEEEecccch-HHHHHHHHhCcCccceeEEEcCCCCCCCCCchhhhhhhc
Q 022534 86 FD-FTENEFHEELDKLLDV---LEVK-YPFFLVVQGFLVG-SYGLTWALKNPSRISKLAILNSPLTASSPLPGLFQQLRI 159 (295)
Q Consensus 86 ~~-~~~~~~~~~l~~~~~~---l~~~-~~~~lv~~G~~~G-~~~~~~a~~~p~~v~~lil~~~p~~~~~~~~~~~~~~~~ 159 (295)
.+ -.+...++.+..+++. .+++ +.++++ |+|.| ++++.+++++|+++.+++.+++ +... .
T Consensus 105 ~d~~~i~~~~~~i~~li~~~~~~gi~~~ri~l~--GfSqGg~~a~~~~~~~~~~~a~~i~~sG-~lp~---~-------- 170 (246)
T 4f21_A 105 VDVEGINSSIAKVNKLIDSQVNQGIASENIILA--GFSQGGIIATYTAITSQRKLGGIMALST-YLPA---W-------- 170 (246)
T ss_dssp SCCC-CHHHHHHHHHHHHHHHHC-CCGGGEEEE--EETTTTHHHHHHHTTCSSCCCEEEEESC-CCTT---H--------
T ss_pred hhHHHHHHHHHHHHHHHHHHHHcCCChhcEEEE--EeCchHHHHHHHHHhCccccccceehhh-ccCc---c--------
Confidence 00 0233445555555543 2343 235554 77765 6788889999999999998853 2100 0
Q ss_pred ccchhhhhhhHHHHHHHHHhCCCccccccccccccccccccCCchhHHHHHHHhcchhhhhHhhhcCcCCCCCCCcEEEE
Q 022534 160 PLLGEFTAQNAIMAERFIEAGSPYVLKLDKADVYRLPYLASSGPGFALLEAARKVNFKDISSRIGAGFSSGSWDKPVLVA 239 (295)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i 239 (295)
..+. . . . ... .-++|++++
T Consensus 171 --------------~~~~-~-----------~---~---------------------~~~-----------~~~~Pvl~~ 189 (246)
T 4f21_A 171 --------------DNFK-G-----------K---I---------------------TSI-----------NKGLPILVC 189 (246)
T ss_dssp --------------HHHS-T-----------T---C---------------------CGG-----------GTTCCEEEE
T ss_pred --------------cccc-c-----------c---c---------------------ccc-----------ccCCchhhc
Confidence 0000 0 0 0 000 115899999
Q ss_pred EeCCCCCCCcchHHHHHhc---CCCCeEEEEecCCCCCCCCCChHHHHHHHHHHHHh
Q 022534 240 WGISDKYLPQSVAEEFQKG---NPNVVKLQMIEGAGHMPQEDWPEKVVDGLRYFFLN 293 (295)
Q Consensus 240 ~G~~D~~~~~~~~~~~~~~---~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 293 (295)
||++|+++|.+.+++..+. ....+++..++++||... ++++ +.+.+||.+
T Consensus 190 HG~~D~vVp~~~~~~~~~~L~~~g~~v~~~~y~g~gH~i~---~~~l-~~~~~fL~k 242 (246)
T 4f21_A 190 HGTDDQVLPEVLGHDLSDKLKVSGFANEYKHYVGMQHSVC---MEEI-KDISNFIAK 242 (246)
T ss_dssp EETTCSSSCHHHHHHHHHHHHTTTCCEEEEEESSCCSSCC---HHHH-HHHHHHHHH
T ss_pred ccCCCCccCHHHHHHHHHHHHHCCCCeEEEEECCCCCccC---HHHH-HHHHHHHHH
Confidence 9999999998877665443 333479999999999763 4444 678899876
|
| >1rp1_A Pancreatic lipase related protein 1; hydrolase, lipid degradation; HET: NAG; 2.10A {Canis lupus familiaris} SCOP: b.12.1.2 c.69.1.19 PDB: 2ppl_A | Back alignment and structure |
|---|
Probab=99.41 E-value=1.1e-13 Score=125.65 Aligned_cols=99 Identities=14% Similarity=0.231 Sum_probs=75.2
Q ss_pred CceEEEEcCCCCCCc-cchh-hHHHhhh-CCCeEEEeCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh------C
Q 022534 35 LGTIVFLHGAPSHSY-SYRN-VMSQMSD-AGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEELDKLLDVL------E 105 (295)
Q Consensus 35 ~~~vv~lHG~~~~~~-~w~~-~~~~l~~-~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~l~~~~~~l------~ 105 (295)
+|++|+||||+++.. .|.. +++.|.+ .+|+||++|+||||.|..+.. .++.+.+++++.++++.+ +
T Consensus 70 ~p~vvliHG~~~s~~~~w~~~l~~~ll~~~~~~VI~vD~~g~g~s~y~~~-----~~~~~~~a~~l~~ll~~L~~~~g~~ 144 (450)
T 1rp1_A 70 KKTRFIIHGFIDKGEENWLLDMCKNMFKVEEVNCICVDWKKGSQTSYTQA-----ANNVRVVGAQVAQMLSMLSANYSYS 144 (450)
T ss_dssp SEEEEEECCCCCTTCTTHHHHHHHHHTTTCCEEEEEEECHHHHSSCHHHH-----HHHHHHHHHHHHHHHHHHHHHHCCC
T ss_pred CCeEEEEccCCCCCCcchHHHHHHHHHhcCCeEEEEEeCccccCCcchHH-----HHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 578999999998875 7876 5566543 379999999999998863221 234567788888888876 2
Q ss_pred CCCceEEEEecccch-HHHHHHHHhCcCccceeEEEcC
Q 022534 106 VKYPFFLVVQGFLVG-SYGLTWALKNPSRISKLAILNS 142 (295)
Q Consensus 106 ~~~~~~lv~~G~~~G-~~~~~~a~~~p~~v~~lil~~~ 142 (295)
+++ ++|| |||+| .+|+.+|..+|+ |.+++++++
T Consensus 145 ~~~-v~LV--GhSlGg~vA~~~a~~~p~-v~~iv~Ldp 178 (450)
T 1rp1_A 145 PSQ-VQLI--GHSLGAHVAGEAGSRTPG-LGRITGLDP 178 (450)
T ss_dssp GGG-EEEE--EETHHHHHHHHHHHTSTT-CCEEEEESC
T ss_pred hhh-EEEE--EECHhHHHHHHHHHhcCC-cccccccCc
Confidence 454 6777 77776 467788889999 999998864
|
| >1gpl_A RP2 lipase; serine esterase, hydrolase, lipid degradation, pancreas, glycoprotein, chimeric; 2.01A {Cavia porcellus} SCOP: b.12.1.2 c.69.1.19 PDB: 1lpb_B* 1lpa_B* 1n8s_A | Back alignment and structure |
|---|
Probab=99.39 E-value=1.4e-13 Score=124.82 Aligned_cols=102 Identities=16% Similarity=0.233 Sum_probs=78.8
Q ss_pred CCceEEEEcCCCCCC-ccchh-hHHHhhh-CCCeEEEeCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh----CC
Q 022534 34 RLGTIVFLHGAPSHS-YSYRN-VMSQMSD-AGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEELDKLLDVL----EV 106 (295)
Q Consensus 34 ~~~~vv~lHG~~~~~-~~w~~-~~~~l~~-~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~l~~~~~~l----~~ 106 (295)
.+|+||++||++++. ..|.. +++.|.+ .+|+|+++|+||||+|..+.. .++.+.++.++.++++.+ ++
T Consensus 69 ~~~~vvllHG~~~s~~~~w~~~~~~~l~~~~~~~Vi~~D~~g~g~s~~~~~-----~~~~~~~~~dl~~~i~~l~~~~g~ 143 (432)
T 1gpl_A 69 NRKTRFIIHGFTDSGENSWLSDMCKNMFQVEKVNCICVDWKGGSKAQYSQA-----SQNIRVVGAEVAYLVQVLSTSLNY 143 (432)
T ss_dssp TSEEEEEECCTTCCTTSHHHHHHHHHHHHHCCEEEEEEECHHHHTSCHHHH-----HHHHHHHHHHHHHHHHHHHHHHCC
T ss_pred CCCeEEEECCCCCCCCchHHHHHHHHHHhcCCcEEEEEECccccCccchhh-----HhhHHHHHHHHHHHHHHHHHhcCC
Confidence 357999999999988 68987 7788875 589999999999999984321 124567778888888876 42
Q ss_pred -CCceEEEEecccchH-HHHHHHHhCcCccceeEEEcC
Q 022534 107 -KYPFFLVVQGFLVGS-YGLTWALKNPSRISKLAILNS 142 (295)
Q Consensus 107 -~~~~~lv~~G~~~G~-~~~~~a~~~p~~v~~lil~~~ 142 (295)
.++++|+ |||+|+ +++.+|.++|++|++++++++
T Consensus 144 ~~~~i~lv--GhSlGg~vA~~~a~~~p~~v~~iv~l~p 179 (432)
T 1gpl_A 144 APENVHII--GHSLGAHTAGEAGKRLNGLVGRITGLDP 179 (432)
T ss_dssp CGGGEEEE--EETHHHHHHHHHHHTTTTCSSEEEEESC
T ss_pred CcccEEEE--EeCHHHHHHHHHHHhcccccceeEEecc
Confidence 2357777 777765 677788889999999998864
|
| >3n2z_B Lysosomal Pro-X carboxypeptidase; alpha/beta hydrolase, PRCP, serine carboxypeptidase, hydrola; HET: NAG; 2.79A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.38 E-value=1.6e-12 Score=117.64 Aligned_cols=109 Identities=15% Similarity=0.200 Sum_probs=77.4
Q ss_pred ceEEEEcCCCCCCcc-ch--hhHHHhhhC-CCeEEEeCCCCCCCCCCCCC-C---CCCCC-CCHHHHHHHHHHHHHHhCC
Q 022534 36 GTIVFLHGAPSHSYS-YR--NVMSQMSDA-GFHCFAPDWLGFGFSDKPEK-G---YDDFD-FTENEFHEELDKLLDVLEV 106 (295)
Q Consensus 36 ~~vv~lHG~~~~~~~-w~--~~~~~l~~~-~~~via~Dl~G~G~S~~~~~-~---~~~~~-~~~~~~~~~l~~~~~~l~~ 106 (295)
.||+|+||+.++... |. .....|++. +++|+++|+||||+|..... . .++.. ++.+++++|+..+++.+..
T Consensus 39 ~Pi~l~~Ggeg~~~~~~~~~g~~~~lA~~~~~~Vi~~DhRg~G~S~p~~~~~~~~~~~l~~lt~~q~~~Dl~~~~~~l~~ 118 (446)
T 3n2z_B 39 GSILFYTGNEGDIIWFCNNTGFMWDVAEELKAMLVFAEHRYYGESLPFGDNSFKDSRHLNFLTSEQALADFAELIKHLKR 118 (446)
T ss_dssp CEEEEEECCSSCHHHHHHHCHHHHHHHHHHTEEEEEECCTTSTTCCTTGGGGGSCTTTSTTCSHHHHHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCCcchhhhhcccHHHHHHHHhCCcEEEEecCCCCCCCCCCccccccchhhccCCHHHHHHHHHHHHHHHHH
Confidence 479999998876543 21 233344432 57999999999999974211 0 01112 2678899999999998764
Q ss_pred C------CceEEEEecccch-HHHHHHHHhCcCccceeEEEcCCCCC
Q 022534 107 K------YPFFLVVQGFLVG-SYGLTWALKNPSRISKLAILNSPLTA 146 (295)
Q Consensus 107 ~------~~~~lv~~G~~~G-~~~~~~a~~~p~~v~~lil~~~p~~~ 146 (295)
+ .|++++ |||+| ++++.++.+||++|.++|+.++|...
T Consensus 119 ~~~~~~~~p~il~--GhS~GG~lA~~~~~~yP~~v~g~i~ssapv~~ 163 (446)
T 3n2z_B 119 TIPGAENQPVIAI--GGSYGGMLAAWFRMKYPHMVVGALAASAPIWQ 163 (446)
T ss_dssp HSTTGGGCCEEEE--EETHHHHHHHHHHHHCTTTCSEEEEETCCTTC
T ss_pred hcccCCCCCEEEE--EeCHHHHHHHHHHHhhhccccEEEEeccchhc
Confidence 3 367777 66664 67888999999999999988777654
|
| >2hih_A Lipase 46 kDa form; A1 phospholipase, phospholipid binding, hydrolase; 2.86A {Staphylococcus hyicus} | Back alignment and structure |
|---|
Probab=99.33 E-value=1e-13 Score=124.91 Aligned_cols=109 Identities=12% Similarity=0.276 Sum_probs=75.7
Q ss_pred CceEEEEcCCCCC--------Cccch----hhHHHhhhCCCeEEEeCCCCCCCCCCCCCC-----------C---CCCCC
Q 022534 35 LGTIVFLHGAPSH--------SYSYR----NVMSQMSDAGFHCFAPDWLGFGFSDKPEKG-----------Y---DDFDF 88 (295)
Q Consensus 35 ~~~vv~lHG~~~~--------~~~w~----~~~~~l~~~~~~via~Dl~G~G~S~~~~~~-----------~---~~~~~ 88 (295)
++||||+||++++ ...|. .+++.|++.||+|+++|+||||.|..+... + ....|
T Consensus 52 ~~pVVLvHG~~g~~~~~~~~~~~~W~~~~~~l~~~L~~~Gy~Via~Dl~G~G~S~~~~~~l~~~i~~g~g~sg~~~~~~~ 131 (431)
T 2hih_A 52 KDPFVFVHGFTGFVGEVAAKGENYWGGTKANLRNHLRKAGYETYEASVSALASNHERAVELYYYLKGGRVDYGAAHSEKY 131 (431)
T ss_dssp SSCEEEECCTTCCCGGGSCTTCCTTTTTTCCHHHHHHHTTCCEEEECCCSSSCHHHHHHHHHHHHHCEEEECCHHHHHHH
T ss_pred CCeEEEECCCCCCcccccccchhhhhccHHHHHHHHHhCCCEEEEEcCCCCCCCccchHHhhhhhhhccccccccccccC
Confidence 5789999999774 34574 588999878999999999999998631100 0 00012
Q ss_pred CHHHHHHHHHHHHHHhCCCCceEEEEecccchH-HHHHHHHh--------------------------CcCccceeEEEc
Q 022534 89 TENEFHEELDKLLDVLEVKYPFFLVVQGFLVGS-YGLTWALK--------------------------NPSRISKLAILN 141 (295)
Q Consensus 89 ~~~~~~~~l~~~~~~l~~~~~~~lv~~G~~~G~-~~~~~a~~--------------------------~p~~v~~lil~~ 141 (295)
+++++++++.+++++++..++++|| |||+|+ ++..+|.. +|++|.++|+++
T Consensus 132 ~~~~~a~dl~~ll~~l~~~~kv~LV--GHSmGG~iA~~lA~~l~~~~~~~~~~~~~~gg~i~~l~~g~~p~~V~slv~i~ 209 (431)
T 2hih_A 132 GHERYGKTYEGVLKDWKPGHPVHFI--GHSMGGQTIRLLEHYLRFGDKAEIAYQQQHGGIISELFKGGQDNMVTSITTIA 209 (431)
T ss_dssp TCCSEEEEECCSCTTCBTTBCEEEE--EETTHHHHHHHHHHHHHHCCHHHHHHHHHHCSCCCHHHHCCCCSCEEEEEEES
T ss_pred CHHHHHHHHHHHHHHhCCCCCEEEE--EEChhHHHHHHHHHHhccccccchhhccccccccccccccCcccceeEEEEEC
Confidence 3344556667777777643467787 677765 45555544 689999999998
Q ss_pred CCCC
Q 022534 142 SPLT 145 (295)
Q Consensus 142 ~p~~ 145 (295)
+|..
T Consensus 210 tP~~ 213 (431)
T 2hih_A 210 TPHN 213 (431)
T ss_dssp CCTT
T ss_pred CCCC
Confidence 7754
|
| >1mpx_A Alpha-amino acid ester hydrolase; alpha/beta hydrolase, jellyroll, selenomethionine; 1.90A {Xanthomonas citri} SCOP: b.18.1.13 c.69.1.21 | Back alignment and structure |
|---|
Probab=99.31 E-value=1.2e-10 Score=110.28 Aligned_cols=126 Identities=6% Similarity=-0.106 Sum_probs=78.7
Q ss_pred eCcEEEEEEEcCCCC-CCCceEEEEcCCCCCC-------ccchh-hH---HHhhhCCCeEEEeCCCCCCCCCCCCCCCCC
Q 022534 18 SGEYRWFVRETGSAD-SRLGTIVFLHGAPSHS-------YSYRN-VM---SQMSDAGFHCFAPDWLGFGFSDKPEKGYDD 85 (295)
Q Consensus 18 ~~~~~~~~~~~g~~~-~~~~~vv~lHG~~~~~-------~~w~~-~~---~~l~~~~~~via~Dl~G~G~S~~~~~~~~~ 85 (295)
.+|.++++..+.+.. .+.|+||++||++.+. ..|.. +. +.|+++||.|+++|.||+|.|+........
T Consensus 33 ~DG~~L~~~~~~P~~~~~~P~vl~~hgyg~~~~~~~~~~~~~~~~~~~~~~~la~~Gy~Vv~~D~RG~g~S~g~~~~~~~ 112 (615)
T 1mpx_A 33 RDGVKLHTVIVLPKGAKNAPIVLTRTPYDASGRTERLASPHMKDLLSAGDDVFVEGGYIRVFQDVRGKYGSEGDYVMTRP 112 (615)
T ss_dssp TTSCEEEEEEEEETTCCSEEEEEEEESSCHHHHTCSSCCSSHHHHSCGGGHHHHHTTCEEEEEECTTSTTCCSCCCTTCC
T ss_pred CCCCEEEEEEEeCCCCCCeeEEEEEcCCCCccccccccccccccccchhHHHHHhCCeEEEEECCCCCCCCCCccccccc
Confidence 378888887665433 2347888899988753 23432 22 678888999999999999999875322100
Q ss_pred --CCCCH--HHHHHHHHHHHHHhC----C-CCceEEEEecccchH-HHHHHHHhCcCccceeEEEcCCCC
Q 022534 86 --FDFTE--NEFHEELDKLLDVLE----V-KYPFFLVVQGFLVGS-YGLTWALKNPSRISKLAILNSPLT 145 (295)
Q Consensus 86 --~~~~~--~~~~~~l~~~~~~l~----~-~~~~~lv~~G~~~G~-~~~~~a~~~p~~v~~lil~~~p~~ 145 (295)
..|.. ...++|+.++++.+. . +.++.++ |+|.|+ +++.+|..+|++++++|..+++..
T Consensus 113 ~~~~~~~~g~~~~~D~~~~i~~l~~~~~~~~~rv~l~--G~S~GG~~al~~a~~~~~~l~a~v~~~~~~d 180 (615)
T 1mpx_A 113 LRGPLNPSEVDHATDAWDTIDWLVKNVSESNGKVGMI--GSSYEGFTVVMALTNPHPALKVAVPESPMID 180 (615)
T ss_dssp CSBTTBCSSCCHHHHHHHHHHHHHHHCTTEEEEEEEE--EETHHHHHHHHHHTSCCTTEEEEEEESCCCC
T ss_pred cccccccccccHHHHHHHHHHHHHhcCCCCCCeEEEE--ecCHHHHHHHHHhhcCCCceEEEEecCCccc
Confidence 00110 023455555555432 1 2245555 777765 456666788999999998865443
|
| >1sfr_A Antigen 85-A; alpha/beta hydrolase, structural genomics, PSI, protein structure initiative, TB structural genomics consortium, TBSGC; 2.70A {Mycobacterium tuberculosis} SCOP: c.69.1.3 | Back alignment and structure |
|---|
Probab=99.23 E-value=4.8e-10 Score=96.73 Aligned_cols=108 Identities=17% Similarity=0.164 Sum_probs=71.4
Q ss_pred CCceEEEEcCC--CCCCccchhh---HHHhhhCCCeEEEeCCCCC-CCCCCCCCCC-CC--CCCCHHHH-HHHHHHHHHH
Q 022534 34 RLGTIVFLHGA--PSHSYSYRNV---MSQMSDAGFHCFAPDWLGF-GFSDKPEKGY-DD--FDFTENEF-HEELDKLLDV 103 (295)
Q Consensus 34 ~~~~vv~lHG~--~~~~~~w~~~---~~~l~~~~~~via~Dl~G~-G~S~~~~~~~-~~--~~~~~~~~-~~~l~~~~~~ 103 (295)
..|+|+++||+ +++...|... .+.+++.++.|+++|.+|. +.++...+.. .+ ..+..+++ ++++..++++
T Consensus 33 ~~p~vvllHG~~~~~~~~~w~~~~~~~~~~~~~~~~vv~p~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~i~~ 112 (304)
T 1sfr_A 33 NSPALYLLDGLRAQDDFSGWDINTPAFEWYDQSGLSVVMPVGGQSSFYSDWYQPACGKAGCQTYKWETFLTSELPGWLQA 112 (304)
T ss_dssp TBCEEEEECCTTCCSSSCHHHHHCCHHHHHTTSSCEEEEECCCTTCTTCBCSSCEEETTEEECCBHHHHHHTHHHHHHHH
T ss_pred CCCEEEEeCCCCCCCCcchhhcCCCHHHHHhcCCeEEEEECCCCCccccccCCccccccccccccHHHHHHHHHHHHHHH
Confidence 46799999999 6677788764 3556666899999999765 2232211100 00 01233444 4788888886
Q ss_pred -hCCC-CceEEEEecccchH-HHHHHHHhCcCccceeEEEcCC
Q 022534 104 -LEVK-YPFFLVVQGFLVGS-YGLTWALKNPSRISKLAILNSP 143 (295)
Q Consensus 104 -l~~~-~~~~lv~~G~~~G~-~~~~~a~~~p~~v~~lil~~~p 143 (295)
++++ ..+.++ |+|+|+ +++.+|+++|+++++++++++.
T Consensus 113 ~~~~~~~~~~l~--G~S~GG~~al~~a~~~p~~~~~~v~~sg~ 153 (304)
T 1sfr_A 113 NRHVKPTGSAVV--GLSMAASSALTLAIYHPQQFVYAGAMSGL 153 (304)
T ss_dssp HHCBCSSSEEEE--EETHHHHHHHHHHHHCTTTEEEEEEESCC
T ss_pred HCCCCCCceEEE--EECHHHHHHHHHHHhCccceeEEEEECCc
Confidence 5654 245555 777765 5778889999999999988643
|
| >2dsn_A Thermostable lipase; T1 lipase, hydrolase; 1.50A {Geobacillus zalihae} PDB: 3umj_A 2z5g_A 1ji3_A 3auk_A 2w22_A* 1ku0_A | Back alignment and structure |
|---|
Probab=99.23 E-value=3.2e-11 Score=107.10 Aligned_cols=43 Identities=19% Similarity=0.227 Sum_probs=35.5
Q ss_pred CceEEEEcCCCCCCc-------cchhhH----HHhhhCCCeEEEeCCCCCCCCC
Q 022534 35 LGTIVFLHGAPSHSY-------SYRNVM----SQMSDAGFHCFAPDWLGFGFSD 77 (295)
Q Consensus 35 ~~~vv~lHG~~~~~~-------~w~~~~----~~l~~~~~~via~Dl~G~G~S~ 77 (295)
++||||+||++++.. .|..+. +.|+++||+|+++|+||||.|.
T Consensus 6 ~~pVVLvHG~~g~~~~~~~~~~yW~~~~~~la~~L~~~G~~Via~Dl~g~G~s~ 59 (387)
T 2dsn_A 6 DAPIVLLHGFTGWGREEMFGFKYWGGVRGDIEQWLNDNGYRTYTLAVGPLSSNW 59 (387)
T ss_dssp CCCEEEECCSSCCCTTSGGGCCTTTTTTCCHHHHHHHTTCCEEEECCCSSBCHH
T ss_pred CCcEEEECCCCCCCcccccccchhhhhhHHHHHHHHHCCCEEEEecCCCCCCcc
Confidence 568999999987643 477544 8998789999999999999875
|
| >2px6_A Thioesterase domain; thioesaterse domain, orlistat, fatty acid synthase, drug complex, tetrahydrolipstatin, transferase; HET: DH9; 2.30A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.22 E-value=4.7e-10 Score=97.25 Aligned_cols=92 Identities=10% Similarity=0.174 Sum_probs=70.5
Q ss_pred CceEEEEcCCCCCCccchhhHHHhhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCceEEEE
Q 022534 35 LGTIVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEELDKLLDVLEVKYPFFLVV 114 (295)
Q Consensus 35 ~~~vv~lHG~~~~~~~w~~~~~~l~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~~lv~ 114 (295)
+++++|+||++++...|..+++.|. ++|+++|+|| +.+ .++++++++++.+.++.+....+++++
T Consensus 46 ~~~l~~~hg~~g~~~~~~~~~~~l~---~~v~~~~~~~----~~~-------~~~~~~~a~~~~~~i~~~~~~~~~~l~- 110 (316)
T 2px6_A 46 ERPLFLVHPIEGSTTVFHSLASRLS---IPTYGLQCTR----AAP-------LDSIHSLAAYYIDCIRQVQPEGPYRVA- 110 (316)
T ss_dssp SCCEEEECCTTCCSGGGHHHHHHCS---SCEEEECCCT----TSC-------TTCHHHHHHHHHHHHTTTCSSCCCEEE-
T ss_pred CCeEEEECCCCCCHHHHHHHHHhcC---CCEEEEECCC----CCC-------cCCHHHHHHHHHHHHHHhCCCCCEEEE-
Confidence 4689999999999999999998884 8999999992 211 236789999999999887655567777
Q ss_pred ecccchH-HHHHHHHhC---cCc---cceeEEEcC
Q 022534 115 QGFLVGS-YGLTWALKN---PSR---ISKLAILNS 142 (295)
Q Consensus 115 ~G~~~G~-~~~~~a~~~---p~~---v~~lil~~~ 142 (295)
|||+|+ ++..+|.+. +++ +++++++++
T Consensus 111 -G~S~Gg~va~~~a~~l~~~g~~~p~v~~l~li~~ 144 (316)
T 2px6_A 111 -GYSYGACVAFEMCSQLQAQQSPAPTHNSLFLFDG 144 (316)
T ss_dssp -EETHHHHHHHHHHHHHHHHC---CCCCEEEEESC
T ss_pred -EECHHHHHHHHHHHHHHHcCCcccccceEEEEcC
Confidence 777764 677777654 345 889998865
|
| >3g8y_A SUSD/RAGB-associated esterase-like protein; structural genom joint center for structural genomics, JCSG; HET: MSE; 1.90A {Bacteroides vulgatus atcc 8482} | Back alignment and structure |
|---|
Probab=99.13 E-value=1.4e-10 Score=103.68 Aligned_cols=105 Identities=12% Similarity=0.170 Sum_probs=66.6
Q ss_pred CCceEEEEcCCCCCCcc--------------ch----hhHHHhhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCCHHHHH-
Q 022534 34 RLGTIVFLHGAPSHSYS--------------YR----NVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFH- 94 (295)
Q Consensus 34 ~~~~vv~lHG~~~~~~~--------------w~----~~~~~l~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~- 94 (295)
+.|+||++||++++... |. .++..|+++||.|+++|+||||.|..+......+.+....++
T Consensus 113 ~~P~Vl~~HG~g~~~~~~~~~~~~~~~~~~~y~~~~~~~a~~la~~G~~Vl~~D~rg~G~s~~~~~~~~~~~~~~~~~~~ 192 (391)
T 3g8y_A 113 AVPGVLCIPGSGRTKEGLVGEPGICDKLTEDYNNPKVSMALNMVKEGYVAVAVDNAAAGEASDLECYDKGWNYDYDVVSR 192 (391)
T ss_dssp CEEEEEEECCTTCCHHHHTTCCCSSGGGCCCTTSTTTCHHHHHHTTTCEEEECCCTTSGGGCSSGGGTTTTSCCHHHHHH
T ss_pred CCCEEEEeCCCCCCchhhccccccccccchhhcchHHHHHHHHHHCCCEEEEecCCCccccCCcccccccccchHHHHHH
Confidence 46899999999876531 23 678889888999999999999999865321101112333332
Q ss_pred --------------HHHHHHHHHhCC----C-CceEEEEecccchHH-HHHHHHhCcCccceeEEEc
Q 022534 95 --------------EELDKLLDVLEV----K-YPFFLVVQGFLVGSY-GLTWALKNPSRISKLAILN 141 (295)
Q Consensus 95 --------------~~l~~~~~~l~~----~-~~~~lv~~G~~~G~~-~~~~a~~~p~~v~~lil~~ 141 (295)
.|+...++.+.. + +.+.++ |+|+|+. ++.+|+ .+++|+++|+.+
T Consensus 193 ~~~~~g~~~~~~~~~D~~~a~d~l~~~~~vd~~rI~v~--G~S~GG~~al~~a~-~~~~i~a~v~~~ 256 (391)
T 3g8y_A 193 FLLELGWSWLGYTSYLDMQVLNWMKAQSYIRKDRIVIS--GFSLGTEPMMVLGV-LDKDIYAFVYND 256 (391)
T ss_dssp HHHHTTCCHHHHHHHHHHHHHHHHHTCTTEEEEEEEEE--EEGGGHHHHHHHHH-HCTTCCEEEEES
T ss_pred HHHhcCCCHHHHHHHHHHHHHHHHHhccCCCCCeEEEE--EEChhHHHHHHHHH-cCCceeEEEEcc
Confidence 556666665421 1 224444 7887754 444444 456789888764
|
| >2b9v_A Alpha-amino acid ester hydrolase; catalytic triad, alpha/beta-hydrolase; 2.00A {Acetobacter pasteurianus} SCOP: b.18.1.13 c.69.1.21 PDB: 2b4k_A 1nx9_A* 1ryy_A | Back alignment and structure |
|---|
Probab=99.12 E-value=3.1e-09 Score=101.09 Aligned_cols=126 Identities=9% Similarity=-0.069 Sum_probs=76.6
Q ss_pred eCcEEEEEEEcCCCC-CCCceEEEEcCCCCCC--------ccchhh---H-HHhhhCCCeEEEeCCCCCCCCCCCCCCCC
Q 022534 18 SGEYRWFVRETGSAD-SRLGTIVFLHGAPSHS--------YSYRNV---M-SQMSDAGFHCFAPDWLGFGFSDKPEKGYD 84 (295)
Q Consensus 18 ~~~~~~~~~~~g~~~-~~~~~vv~lHG~~~~~--------~~w~~~---~-~~l~~~~~~via~Dl~G~G~S~~~~~~~~ 84 (295)
.+|.+++...+.+.. .+.|+||++||++... ..|... . +.|+++||.|+.+|.||+|.|+.......
T Consensus 45 ~DG~~L~~~l~~P~~~~~~PvIl~~hpyg~~~~~~~~~~~~~~~~~~~~~~~~la~~GyaVv~~D~RG~g~S~g~~~~~~ 124 (652)
T 2b9v_A 45 RDGVKLYTVIVIPKNARNAPILLTRTPYNAKGRANRVPNALTMREVLPQGDDVFVEGGYIRVFQDIRGKYGSQGDYVMTR 124 (652)
T ss_dssp TTSCEEEEEEEEETTCCSEEEEEEEESSCHHHHTCSSTTCSSHHHHSCGGGHHHHHTTCEEEEEECTTSTTCCSCCCTTC
T ss_pred CCCcEEEEEEEecCCCCCccEEEEECCCCCCcccccccccccccccccchHHHHHhCCCEEEEEecCcCCCCCCcccccc
Confidence 367788776654432 2347888899887541 112211 2 67888899999999999999997432210
Q ss_pred C--CCCCH--HHHHHHHHHHHHHh----CC-CCceEEEEecccchH-HHHHHHHhCcCccceeEEEcCCCC
Q 022534 85 D--FDFTE--NEFHEELDKLLDVL----EV-KYPFFLVVQGFLVGS-YGLTWALKNPSRISKLAILNSPLT 145 (295)
Q Consensus 85 ~--~~~~~--~~~~~~l~~~~~~l----~~-~~~~~lv~~G~~~G~-~~~~~a~~~p~~v~~lil~~~p~~ 145 (295)
. ..|.. ....+|+.++++.+ .. +.++.++ |+|.|+ +++.+|.++|++++++|..+++..
T Consensus 125 ~~~~~~~~~g~~~~~D~~~~i~~l~~~~~~~d~rvgl~--G~SyGG~~al~~a~~~~~~lka~v~~~~~~d 193 (652)
T 2b9v_A 125 PPHGPLNPTKTDETTDAWDTVDWLVHNVPESNGRVGMT--GSSYEGFTVVMALLDPHPALKVAAPESPMVD 193 (652)
T ss_dssp CCSBTTBCSSCCHHHHHHHHHHHHHHSCTTEEEEEEEE--EEEHHHHHHHHHHTSCCTTEEEEEEEEECCC
T ss_pred cccccccccccchhhHHHHHHHHHHhcCCCCCCCEEEE--ecCHHHHHHHHHHhcCCCceEEEEecccccc
Confidence 0 00110 02345555555543 21 2245554 777664 566667789999999998765443
|
| >1r88_A MPT51/MPB51 antigen; ALFA/beta hydrolase fold, FBPC1, immune system; 1.71A {Mycobacterium tuberculosis} SCOP: c.69.1.3 | Back alignment and structure |
|---|
Probab=99.08 E-value=2e-09 Score=91.73 Aligned_cols=116 Identities=14% Similarity=0.125 Sum_probs=75.6
Q ss_pred cEEEEEEEcCCCCCCCceEEEEcCCC--CCCccchh---hHHHhhhCCCeEEEeCCCCCC-CCCCCCCCCCCCCCCHHHH
Q 022534 20 EYRWFVRETGSADSRLGTIVFLHGAP--SHSYSYRN---VMSQMSDAGFHCFAPDWLGFG-FSDKPEKGYDDFDFTENEF 93 (295)
Q Consensus 20 ~~~~~~~~~g~~~~~~~~vv~lHG~~--~~~~~w~~---~~~~l~~~~~~via~Dl~G~G-~S~~~~~~~~~~~~~~~~~ 93 (295)
+..+.+. +-++. .|+|||+||++ ++...|.. +.+.+++.+|.|+++|.++.+ .++...... .. ..+.+
T Consensus 22 ~~~~~~~-~~P~~--~p~vvllHG~~~~~~~~~w~~~~~~~~~~~~~~~~vv~pd~~~~~~~~~~~~~~~--~~-~~~~~ 95 (280)
T 1r88_A 22 GRDIPVA-FLAGG--PHAVYLLDAFNAGPDVSNWVTAGNAMNTLAGKGISVVAPAGGAYSMYTNWEQDGS--KQ-WDTFL 95 (280)
T ss_dssp TEEEEEE-EECCS--SSEEEEECCSSCCSSSCHHHHTSCHHHHHTTSSSEEEEECCCTTSTTSBCSSCTT--CB-HHHHH
T ss_pred CCcceEE-EeCCC--CCEEEEECCCCCCCChhhhhhcccHHHHHhcCCeEEEEECCCCCCccCCCCCCCC--Cc-HHHHH
Confidence 4555554 32322 36999999994 56777875 445576668999999997642 222111110 11 12345
Q ss_pred HHHHHHHHHH-hCCC-CceEEEEecccchH-HHHHHHHhCcCccceeEEEcCC
Q 022534 94 HEELDKLLDV-LEVK-YPFFLVVQGFLVGS-YGLTWALKNPSRISKLAILNSP 143 (295)
Q Consensus 94 ~~~l~~~~~~-l~~~-~~~~lv~~G~~~G~-~~~~~a~~~p~~v~~lil~~~p 143 (295)
++++..++++ ++++ +.+.++ |+|+|+ +++.+|+++|+++++++++++.
T Consensus 96 ~~~l~~~i~~~~~~~~~~~~l~--G~S~GG~~al~~a~~~p~~~~~~v~~sg~ 146 (280)
T 1r88_A 96 SAELPDWLAANRGLAPGGHAAV--GAAQGGYGAMALAAFHPDRFGFAGSMSGF 146 (280)
T ss_dssp HTHHHHHHHHHSCCCSSCEEEE--EETHHHHHHHHHHHHCTTTEEEEEEESCC
T ss_pred HHHHHHHHHHHCCCCCCceEEE--EECHHHHHHHHHHHhCccceeEEEEECCc
Confidence 6788888887 6764 245565 777765 5778899999999999988543
|
| >1dqz_A 85C, protein (antigen 85-C); fibronectin, structural genomics, PSI, protein structure initiative, TB structural genomics consortium; 1.50A {Mycobacterium tuberculosis} SCOP: c.69.1.3 PDB: 3hrh_A 1dqy_A 1va5_A* 1f0n_A* 1f0p_A* | Back alignment and structure |
|---|
Probab=99.06 E-value=2.7e-09 Score=90.74 Aligned_cols=107 Identities=15% Similarity=0.142 Sum_probs=72.0
Q ss_pred ceEEEEcCCC--CCCccchhhH---HHhhhCCCeEEEeCCCCC-CCCCCCCCCCC-C--CCCCHHH-HHHHHHHHHHH-h
Q 022534 36 GTIVFLHGAP--SHSYSYRNVM---SQMSDAGFHCFAPDWLGF-GFSDKPEKGYD-D--FDFTENE-FHEELDKLLDV-L 104 (295)
Q Consensus 36 ~~vv~lHG~~--~~~~~w~~~~---~~l~~~~~~via~Dl~G~-G~S~~~~~~~~-~--~~~~~~~-~~~~l~~~~~~-l 104 (295)
++|+|+||++ ++...|..+. +.+++.+|.|+++|.+|. +.++...+... . ..+..++ +++++..++++ +
T Consensus 30 ~~v~llHG~~~~~~~~~w~~~~~~~~~l~~~~~~vv~pd~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~i~~~~ 109 (280)
T 1dqz_A 30 HAVYLLDGLRAQDDYNGWDINTPAFEEYYQSGLSVIMPVGGQSSFYTDWYQPSQSNGQNYTYKWETFLTREMPAWLQANK 109 (280)
T ss_dssp SEEEECCCTTCCSSSCHHHHHSCHHHHHTTSSSEEEEECCCTTCTTSBCSSSCTTTTCCSCCBHHHHHHTHHHHHHHHHH
T ss_pred CEEEEECCCCCCCCcccccccCcHHHHHhcCCeEEEEECCCCCccccCCCCCCccccccccccHHHHHHHHHHHHHHHHc
Confidence 4899999995 5778887643 456666899999998864 33332111000 0 1233344 45888888887 7
Q ss_pred CCC-CceEEEEecccchH-HHHHHHHhCcCccceeEEEcCCC
Q 022534 105 EVK-YPFFLVVQGFLVGS-YGLTWALKNPSRISKLAILNSPL 144 (295)
Q Consensus 105 ~~~-~~~~lv~~G~~~G~-~~~~~a~~~p~~v~~lil~~~p~ 144 (295)
+++ +.++++ |+|+|+ +++.+|+++|+++++++++++..
T Consensus 110 ~~~~~~~~l~--G~S~GG~~al~~a~~~p~~~~~~v~~sg~~ 149 (280)
T 1dqz_A 110 GVSPTGNAAV--GLSMSGGSALILAAYYPQQFPYAASLSGFL 149 (280)
T ss_dssp CCCSSSCEEE--EETHHHHHHHHHHHHCTTTCSEEEEESCCC
T ss_pred CCCCCceEEE--EECHHHHHHHHHHHhCCchheEEEEecCcc
Confidence 764 245565 777765 57788999999999999886433
|
| >3guu_A Lipase A; protein structure, hydrolase; HET: 1PE; 2.10A {Candida antarctica} PDB: 2veo_A* | Back alignment and structure |
|---|
Probab=99.02 E-value=6e-10 Score=100.96 Aligned_cols=61 Identities=16% Similarity=0.172 Sum_probs=45.5
Q ss_pred CCCCCcEEEEEeCCCCCCCcchHHHHHhcC---CCCeEEEEecCCCCCCCCCChHHHHHHHHHHHHh
Q 022534 230 GSWDKPVLVAWGISDKYLPQSVAEEFQKGN---PNVVKLQMIEGAGHMPQEDWPEKVVDGLRYFFLN 293 (295)
Q Consensus 230 ~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~---~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 293 (295)
.+.++|+++++|++|+++|.+.+.++.+.. ..+++++.+++.+|....+. -...+.+||.+
T Consensus 341 ~~~~~PvlI~hG~~D~vVP~~~s~~l~~~l~~~G~~V~~~~y~~~~H~~~~~~---~~~d~l~WL~~ 404 (462)
T 3guu_A 341 SVPKFPRFIWHAIPDEIVPYQPAATYVKEQCAKGANINFSPYPIAEHLTAEIF---GLVPSLWFIKQ 404 (462)
T ss_dssp CCCCSEEEEEEETTCSSSCHHHHHHHHHHHHHTTCEEEEEEESSCCHHHHHHH---THHHHHHHHHH
T ss_pred CCCCCCEEEEeCCCCCcCCHHHHHHHHHHHHHcCCCeEEEEECcCCccCchhh---hHHHHHHHHHH
Confidence 467899999999999999998888876543 23579999999999864321 13445666654
|
| >3i2k_A Cocaine esterase; alpha/beta hydrolase, hydrolase; HET: DBC GOL; 1.51A {Rhodococcus SP} PDB: 3i2j_A* 3puh_A 3i2h_A* 3i2i_A* 3i2g_A* 3ida_A* 3i2f_A* 3pui_A 1ju3_A 1ju4_A 1l7q_A 1l7r_A | Back alignment and structure |
|---|
Probab=98.97 E-value=1.6e-09 Score=101.88 Aligned_cols=116 Identities=9% Similarity=-0.037 Sum_probs=80.5
Q ss_pred CcEEEEEEEcCCCC-CCCceEEEEcCCCCCCccc---hhhH-HHhhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCCHHHH
Q 022534 19 GEYRWFVRETGSAD-SRLGTIVFLHGAPSHSYSY---RNVM-SQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEF 93 (295)
Q Consensus 19 ~~~~~~~~~~g~~~-~~~~~vv~lHG~~~~~~~w---~~~~-~~l~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~ 93 (295)
+|.++++..+.+.. .+.|+||+.||++.....+ ...+ ..|+++||.|+++|+||||.|+.....+ ...
T Consensus 18 DG~~L~~~~~~P~~~~~~P~vv~~~~~g~~~~~~~~y~~~~~~~la~~Gy~vv~~D~RG~G~S~g~~~~~-------~~~ 90 (587)
T 3i2k_A 18 DGVRLAVDLYRPDADGPVPVLLVRNPYDKFDVFAWSTQSTNWLEFVRDGYAVVIQDTRGLFASEGEFVPH-------VDD 90 (587)
T ss_dssp TSCEEEEEEEEECCSSCEEEEEEEESSCTTCHHHHHTTTCCTHHHHHTTCEEEEEECTTSTTCCSCCCTT-------TTH
T ss_pred CCCEEEEEEEECCCCCCeeEEEEECCcCCCccccccchhhHHHHHHHCCCEEEEEcCCCCCCCCCccccc-------cch
Confidence 68888876665432 3457899999988775433 2234 7888889999999999999999753221 234
Q ss_pred HHHHHHHHHHhC----CCCceEEEEecccchH-HHHHHHHhCcCccceeEEEcCC
Q 022534 94 HEELDKLLDVLE----VKYPFFLVVQGFLVGS-YGLTWALKNPSRISKLAILNSP 143 (295)
Q Consensus 94 ~~~l~~~~~~l~----~~~~~~lv~~G~~~G~-~~~~~a~~~p~~v~~lil~~~p 143 (295)
.+|+.++++.+. .+.++.++ |+|+|+ +++.+|.++|+.+++++..+++
T Consensus 91 ~~D~~~~i~~l~~~~~~~~~v~l~--G~S~GG~~a~~~a~~~~~~l~a~v~~~~~ 143 (587)
T 3i2k_A 91 EADAEDTLSWILEQAWCDGNVGMF--GVSYLGVTQWQAAVSGVGGLKAIAPSMAS 143 (587)
T ss_dssp HHHHHHHHHHHHHSTTEEEEEEEC--EETHHHHHHHHHHTTCCTTEEEBCEESCC
T ss_pred hHHHHHHHHHHHhCCCCCCeEEEE--eeCHHHHHHHHHHhhCCCccEEEEEeCCc
Confidence 566666666552 12345554 777764 5677778889999999988765
|
| >3nuz_A Putative acetyl xylan esterase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology; 2.30A {Bacteroides fragilis} | Back alignment and structure |
|---|
Probab=98.95 E-value=2.8e-09 Score=95.48 Aligned_cols=120 Identities=11% Similarity=0.072 Sum_probs=69.9
Q ss_pred CcEEEEEEEcCCC--CCCCceEEEEcCCCCCCcc--------------ch----hhHHHhhhCCCeEEEeCCCCCCCCCC
Q 022534 19 GEYRWFVRETGSA--DSRLGTIVFLHGAPSHSYS--------------YR----NVMSQMSDAGFHCFAPDWLGFGFSDK 78 (295)
Q Consensus 19 ~~~~~~~~~~g~~--~~~~~~vv~lHG~~~~~~~--------------w~----~~~~~l~~~~~~via~Dl~G~G~S~~ 78 (295)
+|..++...+-+. ..+.|+||++||++++... |. .++..|+++||.|+++|+||||.|..
T Consensus 101 ~g~~l~~~l~~P~~~~~~~P~Vv~~HG~g~~~~~~~~~~g~~~~~~~~y~~~~~~~a~~la~~Gy~Vl~~D~rG~G~s~~ 180 (398)
T 3nuz_A 101 PKCVSTFLVLIPDNINKPVPAILCIPGSGGNKEGLAGEPGIAPKLNDRYKDPKLTQALNFVKEGYIAVAVDNPAAGEASD 180 (398)
T ss_dssp TTBCEEEEEEEESSCCSCEEEEEEECCTTCCHHHHHTCCCSSSTTCCSTTCTTTCHHHHHHTTTCEEEEECCTTSGGGCS
T ss_pred CCcEEEEEEEeCCCCCCCccEEEEEcCCCCCcccccccccccccccccccchHHHHHHHHHHCCCEEEEecCCCCCcccc
Confidence 4444444433222 2345899999999876442 22 57788998899999999999999975
Q ss_pred CCCCCCCCCCC--------------H-HHHHHHHHHHHHHhCC----C-CceEEEEecccchHH-HHHHHHhCcCcccee
Q 022534 79 PEKGYDDFDFT--------------E-NEFHEELDKLLDVLEV----K-YPFFLVVQGFLVGSY-GLTWALKNPSRISKL 137 (295)
Q Consensus 79 ~~~~~~~~~~~--------------~-~~~~~~l~~~~~~l~~----~-~~~~lv~~G~~~G~~-~~~~a~~~p~~v~~l 137 (295)
.........+. . ...+.|+...++.+.- + ..+.++ |||+|+. ++.+|+. +++|++.
T Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~D~~~ald~l~~~~~vd~~rI~v~--G~S~GG~~a~~~aa~-~~~i~a~ 257 (398)
T 3nuz_A 181 LERYTLGSNYDYDVVSRYLLELGWSYLGYASYLDMQVLNWMKTQKHIRKDRIVVS--GFSLGTEPMMVLGTL-DTSIYAF 257 (398)
T ss_dssp SGGGTTTTSCCHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHTTCSSEEEEEEEEE--EEGGGHHHHHHHHHH-CTTCCEE
T ss_pred ccccccccccchhhhhhHHhhcCCCHHHHHHHHHHHHHHHHHhCCCCCCCeEEEE--EECHhHHHHHHHHhc-CCcEEEE
Confidence 32100000111 1 1123556666665531 1 224444 7887754 4444444 4578888
Q ss_pred EEEc
Q 022534 138 AILN 141 (295)
Q Consensus 138 il~~ 141 (295)
+..+
T Consensus 258 v~~~ 261 (398)
T 3nuz_A 258 VYND 261 (398)
T ss_dssp EEES
T ss_pred EEec
Confidence 7653
|
| >3iii_A COCE/NOND family hydrolase; structural genomics, center for structural genomi infectious diseases, csgid; HET: MSE PLM; 1.95A {Staphylococcus aureus subsp} PDB: 3ib3_A* | Back alignment and structure |
|---|
Probab=98.76 E-value=7.5e-08 Score=89.74 Aligned_cols=116 Identities=6% Similarity=-0.033 Sum_probs=79.2
Q ss_pred CcEEEEEEEcCCCC-CCCceEEEEcCCCCCCc-c-------c--------------h-hhHHHhhhCCCeEEEeCCCCCC
Q 022534 19 GEYRWFVRETGSAD-SRLGTIVFLHGAPSHSY-S-------Y--------------R-NVMSQMSDAGFHCFAPDWLGFG 74 (295)
Q Consensus 19 ~~~~~~~~~~g~~~-~~~~~vv~lHG~~~~~~-~-------w--------------~-~~~~~l~~~~~~via~Dl~G~G 74 (295)
+|.+++...+-+.. .+.|+||+.||++.+.. . | + .....|+++||.|+++|.||+|
T Consensus 50 DG~~L~a~l~~P~~~~~~P~vl~~~pyg~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~~Gy~vv~~D~RG~G 129 (560)
T 3iii_A 50 DGEKLYINIFRPNKDGKFPVVMSADTYGKDNKPKITNMGALWPTLGTIPTSSFTPEESPDPGFWVPNDYVVVKVALRGSD 129 (560)
T ss_dssp TSCEEEEEEEECSSSSCEEEEEEEESSCTTCCCC--CHHHHSGGGCCCCCCTTCCTTSCCHHHHGGGTCEEEEEECTTST
T ss_pred CCcEEEEEEEecCCCCCCCEEEEecCCCCCcccccccccccccccccccccccccccCCCHHHHHhCCCEEEEEcCCCCC
Confidence 68888877665432 34588999999987642 1 1 1 1356788889999999999999
Q ss_pred CCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCC----CCceEEEEecccchH-HHHHHHHhCcCccceeEEEcC
Q 022534 75 FSDKPEKGYDDFDFTENEFHEELDKLLDVLEV----KYPFFLVVQGFLVGS-YGLTWALKNPSRISKLAILNS 142 (295)
Q Consensus 75 ~S~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~----~~~~~lv~~G~~~G~-~~~~~a~~~p~~v~~lil~~~ 142 (295)
.|+..... +. ....+|+.++++.+.. +.++.++ |+|.|+ +++..|+.+|+++++++..++
T Consensus 130 ~S~G~~~~-----~~-~~~~~D~~~~i~~l~~~~~~~~~igl~--G~S~GG~~al~~a~~~p~~l~aiv~~~~ 194 (560)
T 3iii_A 130 KSKGVLSP-----WS-KREAEDYYEVIEWAANQSWSNGNIGTN--GVSYLAVTQWWVASLNPPHLKAMIPWEG 194 (560)
T ss_dssp TCCSCBCT-----TS-HHHHHHHHHHHHHHHTSTTEEEEEEEE--EETHHHHHHHHHHTTCCTTEEEEEEESC
T ss_pred CCCCcccc-----CC-hhHHHHHHHHHHHHHhCCCCCCcEEEE--ccCHHHHHHHHHHhcCCCceEEEEecCC
Confidence 99974321 11 2456677766665521 2345555 677654 566777889999999987754
|
| >1gkl_A Endo-1,4-beta-xylanase Y; hydrolase, esterase family 1, inactive mutant; HET: FER; 1.4A {Clostridium thermocellum} SCOP: c.69.1.2 PDB: 1wb4_A* 1wb5_A* 1wb6_A* 1gkk_A* | Back alignment and structure |
|---|
Probab=98.60 E-value=5.4e-07 Score=77.30 Aligned_cols=98 Identities=12% Similarity=0.179 Sum_probs=65.2
Q ss_pred CCceEEEEcCCCCCCccch-------hhHHHhhhC----CCeEEEeCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
Q 022534 34 RLGTIVFLHGAPSHSYSYR-------NVMSQMSDA----GFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEELDKLLD 102 (295)
Q Consensus 34 ~~~~vv~lHG~~~~~~~w~-------~~~~~l~~~----~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~l~~~~~ 102 (295)
+.|+|+++||++++...|. .+++.|.++ +|.|+++|.+| .+.. ...| .+.+++++..+++
T Consensus 68 ~~Pvlv~lHG~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~ivv~pd~~~--~~~~------~~~~-~~~~~~~l~~~i~ 138 (297)
T 1gkl_A 68 KYNIFYLMHGGGENENTIFSNDVKLQNILDHAIMNGELEPLIVVTPTFNG--GNCT------AQNF-YQEFRQNVIPFVE 138 (297)
T ss_dssp CCEEEEEECCTTCCTTSTTSTTTCHHHHHHHHHHTTSSCCEEEEECCSCS--TTCC------TTTH-HHHHHHTHHHHHH
T ss_pred CCCEEEEECCCCCCcchhhcccchHHHHHHHHHHcCCCCCEEEEEecCcC--Cccc------hHHH-HHHHHHHHHHHHH
Confidence 3578889999988766553 456667655 49999999875 3321 1122 2455677878877
Q ss_pred Hh-CC------------C-CceEEEEecccchH-HHHHHHHhCcCccceeEEEcC
Q 022534 103 VL-EV------------K-YPFFLVVQGFLVGS-YGLTWALKNPSRISKLAILNS 142 (295)
Q Consensus 103 ~l-~~------------~-~~~~lv~~G~~~G~-~~~~~a~~~p~~v~~lil~~~ 142 (295)
.. .. + ..+.++ |+|+|+ +++.+++++|+++++++.+++
T Consensus 139 ~~~~~~~~~~~~~~i~~d~~~~~i~--G~S~GG~~al~~a~~~p~~f~~~v~~sg 191 (297)
T 1gkl_A 139 SKYSTYAESTTPQGIAASRMHRGFG--GFAMGGLTTWYVMVNCLDYVAYFMPLSG 191 (297)
T ss_dssp HHSCSSCSSCSHHHHHTTGGGEEEE--EETHHHHHHHHHHHHHTTTCCEEEEESC
T ss_pred HhCCccccccccccccCCccceEEE--EECHHHHHHHHHHHhCchhhheeeEecc
Confidence 64 32 1 224454 777765 567778899999999998854
|
| >2qm0_A BES; alpha-beta structure, structural genomics, PSI-2, protein ST initiative, midwest center for structural genomics, MCSG; HET: SVY; 1.84A {Bacillus cereus atcc 14579} | Back alignment and structure |
|---|
Probab=98.23 E-value=4.4e-06 Score=70.60 Aligned_cols=55 Identities=20% Similarity=0.236 Sum_probs=38.0
Q ss_pred CCCCcEEEEEeCCCCCCCcchHHHHHhcC---C---CCeEEEEecCCCCCCCCCChHHHHHHH
Q 022534 231 SWDKPVLVAWGISDKYLPQSVAEEFQKGN---P---NVVKLQMIEGAGHMPQEDWPEKVVDGL 287 (295)
Q Consensus 231 ~~~~P~l~i~G~~D~~~~~~~~~~~~~~~---~---~~~~~~~i~~~gH~~~~e~p~~~~~~i 287 (295)
....|+++++|+.|..++...++++.+.+ . ..+++.++|+.+|... .+..+.+.+
T Consensus 209 ~~~~~~~l~~G~~D~~~~~~~~~~~~~~L~~~~~~g~~~~~~~~~g~~H~~~--~~~~l~~~l 269 (275)
T 2qm0_A 209 KFETGVFLTVGSLEREHMVVGANELSERLLQVNHDKLKFKFYEAEGENHASV--VPTSLSKGL 269 (275)
T ss_dssp SSCEEEEEEEETTSCHHHHHHHHHHHHHHHHCCCTTEEEEEEEETTCCTTTH--HHHHHHHHH
T ss_pred CCCceEEEEeCCcccchhhHHHHHHHHHHHhcccCCceEEEEECCCCCcccc--HHHHHHHHH
Confidence 34689999999999866666666766544 2 1358889999999753 344454444
|
| >1cpy_A Serine carboxypeptidase; hydrolase (carboxypeptidase); HET: NAG; 2.60A {Saccharomyces cerevisiae} SCOP: c.69.1.5 PDB: 1wpx_A* 1ysc_A* | Back alignment and structure |
|---|
Probab=98.17 E-value=0.00012 Score=65.46 Aligned_cols=61 Identities=21% Similarity=0.202 Sum_probs=49.1
Q ss_pred CCcEEEEEeCCCCCCCcchHHHHHhcCC------------------------------CCeEEEEecCCCCCCCCCChHH
Q 022534 233 DKPVLVAWGISDKYLPQSVAEEFQKGNP------------------------------NVVKLQMIEGAGHMPQEDWPEK 282 (295)
Q Consensus 233 ~~P~l~i~G~~D~~~~~~~~~~~~~~~~------------------------------~~~~~~~i~~~gH~~~~e~p~~ 282 (295)
.+++|+..|+.|-+++....+...+.+. .+.+++.+.+|||+++.++|++
T Consensus 327 girVlIysGd~D~i~~~~Gt~~wi~~L~w~~~~~F~~a~~~~w~~~~~~~vaG~~~~~~~Ltf~~V~~AGHmVP~dqP~~ 406 (421)
T 1cpy_A 327 DLPILVYAGDKDFICNWLGNKAWTDVLPWKYDEEFASQKVRNWTASITDEVAGEVKSYKHFTYLRVFNGGHMVPFDVPEN 406 (421)
T ss_dssp TCCEEEEEETTCSTTCHHHHHHHHHHCCSTTHHHHHHSCCEEEECTTTCSEEEEECEETTEEEEEETTCCSSHHHHCHHH
T ss_pred CCeEEEEECCcccccChHHHHHHHHhccCccchhhhhccccceEEcCCCceeeEEEEeccEEEEEECCCcccCcccCHHH
Confidence 5899999999999998765544332221 1256788999999999999999
Q ss_pred HHHHHHHHHHh
Q 022534 283 VVDGLRYFFLN 293 (295)
Q Consensus 283 ~~~~i~~fl~~ 293 (295)
..+.+++||.+
T Consensus 407 al~m~~~fl~g 417 (421)
T 1cpy_A 407 ALSMVNEWIHG 417 (421)
T ss_dssp HHHHHHHHHTT
T ss_pred HHHHHHHHhcC
Confidence 99999999976
|
| >2ogt_A Thermostable carboxylesterase EST50; alpha/beta hydrolase, hydrolase; 1.58A {Geobacillus stearothermophilus} PDB: 2ogs_A | Back alignment and structure |
|---|
Probab=98.05 E-value=1.6e-05 Score=73.04 Aligned_cols=124 Identities=8% Similarity=0.026 Sum_probs=70.6
Q ss_pred cEEEEEEEcCCCCCCCceEEEEcCCC---CCCccchhhHHHhhhCC-CeEEEeCCC----CCCCCCCCCCC-C-CCCCCC
Q 022534 20 EYRWFVRETGSADSRLGTIVFLHGAP---SHSYSYRNVMSQMSDAG-FHCFAPDWL----GFGFSDKPEKG-Y-DDFDFT 89 (295)
Q Consensus 20 ~~~~~~~~~g~~~~~~~~vv~lHG~~---~~~~~w~~~~~~l~~~~-~~via~Dl~----G~G~S~~~~~~-~-~~~~~~ 89 (295)
...+++........+.|+||++||++ ++...+......|++++ +.|+++|.| ||+.+...... . ....+.
T Consensus 84 cl~l~v~~P~~~~~~~Pviv~iHGGg~~~g~~~~~~~~~~~la~~~~~vvv~~nYRlg~~Gf~~~~~~~~~~~~~~~n~g 163 (498)
T 2ogt_A 84 GLYLNIWSPAADGKKRPVLFWIHGGAFLFGSGSSPWYDGTAFAKHGDVVVVTINYRMNVFGFLHLGDSFGEAYAQAGNLG 163 (498)
T ss_dssp CCEEEEEESCSSSCCEEEEEEECCSTTTSCCTTCGGGCCHHHHHHHTCEEEEECCCCHHHHCCCCTTTTCGGGTTGGGHH
T ss_pred CcEEEEEecCCCCCCCcEEEEEcCCccCCCCCCCCcCCHHHHHhCCCEEEEeCCCcCchhhccCchhhccccccCCCCcc
Confidence 34444433222223468999999987 55555444456676555 999999999 99988753210 0 011233
Q ss_pred HHHHHHHHHHHHHHh---CCC-CceEEEEecccchH-HHHHHHHh--CcCccceeEEEcCCCC
Q 022534 90 ENEFHEELDKLLDVL---EVK-YPFFLVVQGFLVGS-YGLTWALK--NPSRISKLAILNSPLT 145 (295)
Q Consensus 90 ~~~~~~~l~~~~~~l---~~~-~~~~lv~~G~~~G~-~~~~~a~~--~p~~v~~lil~~~p~~ 145 (295)
+.|....+..+.+.+ +.+ +.+.++ |+|.|+ +++.++.. .+..++++|+.+++..
T Consensus 164 l~D~~~al~wv~~~i~~fggdp~~V~l~--G~SaGg~~~~~~~~~~~~~~lf~~~i~~sg~~~ 224 (498)
T 2ogt_A 164 ILDQVAALRWVKENIAAFGGDPDNITIF--GESAGAASVGVLLSLPEASGLFRRAMLQSGSGS 224 (498)
T ss_dssp HHHHHHHHHHHHHHGGGGTEEEEEEEEE--EETHHHHHHHHHHHCGGGTTSCSEEEEESCCTT
T ss_pred cHHHHHHHHHHHHHHHHhCCCCCeEEEE--EECHHHHHHHHHHhcccccchhheeeeccCCcc
Confidence 455555555554443 322 235565 667664 44444432 3457899988865443
|
| >1qe3_A PNB esterase, para-nitrobenzyl esterase; alpha-beta hydrolase directed evolution; 1.50A {Bacillus subtilis} SCOP: c.69.1.1 PDB: 1c7j_A 1c7i_A | Back alignment and structure |
|---|
Probab=98.05 E-value=1.9e-05 Score=72.39 Aligned_cols=106 Identities=11% Similarity=0.077 Sum_probs=60.9
Q ss_pred CceEEEEcCCC---CCCccchhhHHHhhhC-CCeEEEeCCC----CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh--
Q 022534 35 LGTIVFLHGAP---SHSYSYRNVMSQMSDA-GFHCFAPDWL----GFGFSDKPEKGYDDFDFTENEFHEELDKLLDVL-- 104 (295)
Q Consensus 35 ~~~vv~lHG~~---~~~~~w~~~~~~l~~~-~~~via~Dl~----G~G~S~~~~~~~~~~~~~~~~~~~~l~~~~~~l-- 104 (295)
.|+||++||++ ++...+......|+++ ++.|+.+|.| ||+.+....... ...+.+.|+...+..+.+.+
T Consensus 97 ~PviV~iHGGg~~~g~~~~~~~~~~~la~~g~~vvv~~nYRlg~~Gf~~~~~~~~~~-~~n~gl~D~~~al~wv~~~i~~ 175 (489)
T 1qe3_A 97 LPVMVWIHGGAFYLGAGSEPLYDGSKLAAQGEVIVVTLNYRLGPFGFLHLSSFDEAY-SDNLGLLDQAAALKWVRENISA 175 (489)
T ss_dssp EEEEEEECCSTTTSCCTTSGGGCCHHHHHHHTCEEEEECCCCHHHHSCCCTTTCTTS-CSCHHHHHHHHHHHHHHHHGGG
T ss_pred CCEEEEECCCccccCCCCCcccCHHHHHhcCCEEEEecCccCcccccCccccccccC-CCCcchHHHHHHHHHHHHHHHH
Confidence 58999999965 4444444455667655 4999999999 787765321111 11233455544444443332
Q ss_pred -CCC-CceEEEEecccchHH-HHHHHHh--CcCccceeEEEcCC
Q 022534 105 -EVK-YPFFLVVQGFLVGSY-GLTWALK--NPSRISKLAILNSP 143 (295)
Q Consensus 105 -~~~-~~~~lv~~G~~~G~~-~~~~a~~--~p~~v~~lil~~~p 143 (295)
+.+ +.+.++ |+|.|+. +..++.. .++.+++.|+.+++
T Consensus 176 fggDp~~V~l~--G~SaGg~~~~~~~~~~~~~~lf~~~i~~sg~ 217 (489)
T 1qe3_A 176 FGGDPDNVTVF--GESAGGMSIAALLAMPAAKGLFQKAIMESGA 217 (489)
T ss_dssp GTEEEEEEEEE--EETHHHHHHHHHTTCGGGTTSCSEEEEESCC
T ss_pred hCCCcceeEEE--EechHHHHHHHHHhCccccchHHHHHHhCCC
Confidence 222 235555 6776653 3333332 24678988887543
|
| >2vsq_A Surfactin synthetase subunit 3; ligase, peptidyl carrier protein, ligase phosphoprotein, TER module, phosphopantetheine; 2.60A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=97.84 E-value=5.1e-05 Score=77.73 Aligned_cols=206 Identities=13% Similarity=0.120 Sum_probs=108.7
Q ss_pred CceEEEEcCCCCCCccchhhHHHhhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCceEEEE
Q 022534 35 LGTIVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEELDKLLDVLEVKYPFFLVV 114 (295)
Q Consensus 35 ~~~vv~lHG~~~~~~~w~~~~~~l~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~~lv~ 114 (295)
.++++++|+.++....|..++..|. .+.|++++.++. +..++...+.+..+..+.|+.++
T Consensus 1058 ~~~L~~l~~~~g~~~~y~~la~~L~--~~~v~~l~~~~~-----------------~~~~~~~~~~i~~~~~~gp~~l~- 1117 (1304)
T 2vsq_A 1058 EQIIFAFPPVLGYGLMYQNLSSRLP--SYKLCAFDFIEE-----------------EDRLDRYADLIQKLQPEGPLTLF- 1117 (1304)
T ss_dssp CCEEECCCCTTCBGGGGHHHHTTCC--SCEEEECBCCCS-----------------TTHHHHHHHHHHHHCCSSCEEEE-
T ss_pred CCcceeecccccchHHHHHHHhccc--ccceEeecccCH-----------------HHHHHHHHHHHHHhCCCCCeEEE-
Confidence 4589999999999999988877775 589998877321 23444455566666555678777
Q ss_pred ecccchH-HHHHHHHh---CcCccceeEEEcCCCCCCCCCchhhhhhhcccchhhhhhhHHHHHHHHHhCCCcccccccc
Q 022534 115 QGFLVGS-YGLTWALK---NPSRISKLAILNSPLTASSPLPGLFQQLRIPLLGEFTAQNAIMAERFIEAGSPYVLKLDKA 190 (295)
Q Consensus 115 ~G~~~G~-~~~~~a~~---~p~~v~~lil~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (295)
|||+|+ ++..+|.+ ....+..++++++....... .. .. .. . ....+.+...... .
T Consensus 1118 -G~S~Gg~lA~e~A~~L~~~g~~v~~l~lld~~~~~~~~--~~-~~--~~--~------~~~~~~l~~~~~~----~--- 1176 (1304)
T 2vsq_A 1118 -GYSAGCSLAFEAAKKLEEQGRIVQRIIMVDSYKKQGVS--DL-DG--RT--V------ESDVEALMNVNRD----N--- 1176 (1304)
T ss_dssp -EETTHHHHHHHHHHHHHHSSCCEEEEEEESCCEECSCC----------C--H------HHHHHHHHTTCC---------
T ss_pred -EecCCchHHHHHHHHHHhCCCceeEEEEecCccccccc--cc-cc--cc--c------hhhHHHHHHhhhh----h---
Confidence 777664 56666543 44568888888753221100 00 00 00 0 0000111110000 0
Q ss_pred ccccccccccCCchhHHHHHHHhcchhhhhHhhhcCcCCCCCCCcEEEEEeCCCCCCCcchHHHHHhcCCCCeEEEEecC
Q 022534 191 DVYRLPYLASSGPGFALLEAARKVNFKDISSRIGAGFSSGSWDKPVLVAWGISDKYLPQSVAEEFQKGNPNVVKLQMIEG 270 (295)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~ 270 (295)
........ .. .....+.. .+......+ ....+++|+++++|++|.. +.+....+.+......+++.++
T Consensus 1177 ~~~~~~~l---~~--~~l~~~~~-~~~~~~~~~----~~~~~~~pv~l~~~~~~~~-~~~~~~~W~~~~~~~~~~~~v~- 1244 (1304)
T 2vsq_A 1177 EALNSEAV---KH--GLKQKTHA-FYSYYVNLI----STGQVKADIDLLTSGADFD-IPEWLASWEEATTGVYRMKRGF- 1244 (1304)
T ss_dssp -----CTT---TG--GGHHHHHH-HHHHHHC---------CBSSEEEEEECSSCCC-CCSSEECSSTTBSSCCCEEECS-
T ss_pred hhhcchhc---ch--HHHHHHHH-HHHHHHHHh----ccCCcCCCEEEEEecCccc-cccchhhHHHHhCCCeEEEEeC-
Confidence 00000000 00 00011000 000000000 1136789999999999873 2222223444443446889998
Q ss_pred CCCCCCCCCh--HHHHHHHHHHHHh
Q 022534 271 AGHMPQEDWP--EKVVDGLRYFFLN 293 (295)
Q Consensus 271 ~gH~~~~e~p--~~~~~~i~~fl~~ 293 (295)
++|+.+++.| +++++.|..||..
T Consensus 1245 G~H~~ml~~~~~~~~a~~l~~~L~~ 1269 (1304)
T 2vsq_A 1245 GTHAEMLQGETLDRNAEILLEFLNT 1269 (1304)
T ss_dssp SCTTGGGSHHHHHHHHHHHHHHHHC
T ss_pred CCHHHHCCCHHHHHHHHHHHHHHhc
Confidence 5999888765 4999999999875
|
| >1whs_B Serine carboxypeptidase II; HET: NAG FUC; 2.00A {Triticum aestivum} SCOP: c.69.1.5 PDB: 1wht_B* 1bcs_B* 1bcr_B* 3sc2_B* | Back alignment and structure |
|---|
Probab=97.84 E-value=2.6e-05 Score=59.84 Aligned_cols=61 Identities=20% Similarity=0.239 Sum_probs=53.7
Q ss_pred CCcEEEEEeCCCCCCCcchHHHHHhcCC-----------------------CCeEEEEecCCCCCCCCCChHHHHHHHHH
Q 022534 233 DKPVLVAWGISDKYLPQSVAEEFQKGNP-----------------------NVVKLQMIEGAGHMPQEDWPEKVVDGLRY 289 (295)
Q Consensus 233 ~~P~l~i~G~~D~~~~~~~~~~~~~~~~-----------------------~~~~~~~i~~~gH~~~~e~p~~~~~~i~~ 289 (295)
.+++|+..|+.|-+++....+...+.+. .+.+++.+.+|||+++.++|++..+.++.
T Consensus 64 girvlIy~Gd~D~i~~~~Gt~~~i~~L~w~~~~~~~~w~~~~~vaG~~~~~~~Ltf~~V~~AGHmVP~dqP~~a~~m~~~ 143 (153)
T 1whs_B 64 GLRIWVFSGDTDAVVPLTATRYSIGALGLPTTTSWYPWYDDQEVGGWSQVYKGLTLVSVRGAGHEVPLHRPRQALVLFQY 143 (153)
T ss_dssp TCEEEEEEETTCSSSCHHHHHHHHHTTTCCEEEEEEEEEETTEEEEEEEEETTEEEEEETTCCSSHHHHSHHHHHHHHHH
T ss_pred CceEEEEecCcCcccccHhHHHHHHhCCCCCcccccceeECCCccEEEEEeCeEEEEEECCCcccCcccCHHHHHHHHHH
Confidence 5899999999999999887777766654 13789999999999999999999999999
Q ss_pred HHHh
Q 022534 290 FFLN 293 (295)
Q Consensus 290 fl~~ 293 (295)
|+.+
T Consensus 144 fl~~ 147 (153)
T 1whs_B 144 FLQG 147 (153)
T ss_dssp HHHT
T ss_pred HHCC
Confidence 9975
|
| >3c8d_A Enterochelin esterase; alpha-beta-alpha sandwich, IROD, iron aquisition, structural genomics, PSI-2, protein structure initiative; HET: CIT; 1.80A {Shigella flexneri 2a str} SCOP: b.1.18.20 c.69.1.2 PDB: 2b20_A 3c87_A* 3c8h_A 3mga_A* | Back alignment and structure |
|---|
Probab=97.72 E-value=2.4e-05 Score=69.92 Aligned_cols=103 Identities=17% Similarity=0.129 Sum_probs=62.1
Q ss_pred CCceEEEEcCCCC-CCccchhhHHHhhhCCCe----EEEeCCCCCC-CCCCCCCCCCCCCCCHHHHHHHHHHHHHHh-CC
Q 022534 34 RLGTIVFLHGAPS-HSYSYRNVMSQMSDAGFH----CFAPDWLGFG-FSDKPEKGYDDFDFTENEFHEELDKLLDVL-EV 106 (295)
Q Consensus 34 ~~~~vv~lHG~~~-~~~~w~~~~~~l~~~~~~----via~Dl~G~G-~S~~~~~~~~~~~~~~~~~~~~l~~~~~~l-~~ 106 (295)
+.|+|+++||.+- .......+++.|.++|+- |+++|.+|++ ++..... ...| .+.+++++..++++. ..
T Consensus 196 ~~PvlvllHG~~~~~~~~~~~~~~~l~~~g~~~p~iVV~~d~~~~~~r~~~~~~---~~~~-~~~l~~el~~~i~~~~~~ 271 (403)
T 3c8d_A 196 ERPLAVLLDGEFWAQSMPVWPVLTSLTHRQQLPPAVYVLIDAIDTTHRAHELPC---NADF-WLAVQQELLPLVKVIAPF 271 (403)
T ss_dssp CCCEEEESSHHHHHHTSCCHHHHHHHHHTTSSCSCEEEEECCCSHHHHHHHSSS---CHHH-HHHHHHTHHHHHHHHSCC
T ss_pred CCCEEEEeCCHHHhhcCcHHHHHHHHHHcCCCCCeEEEEECCCCCccccccCCC---hHHH-HHHHHHHHHHHHHHHCCC
Confidence 4589999999532 112234567778776664 9999998742 2221100 0011 223346666666653 32
Q ss_pred --C-CceEEEEecccchH-HHHHHHHhCcCccceeEEEcC
Q 022534 107 --K-YPFFLVVQGFLVGS-YGLTWALKNPSRISKLAILNS 142 (295)
Q Consensus 107 --~-~~~~lv~~G~~~G~-~~~~~a~~~p~~v~~lil~~~ 142 (295)
+ ..+.++ |+|+|+ +++.+++++|+++++++++++
T Consensus 272 ~~d~~~~~l~--G~S~GG~~al~~a~~~p~~f~~~~~~sg 309 (403)
T 3c8d_A 272 SDRADRTVVA--GQSFGGLSALYAGLHWPERFGCVLSQSG 309 (403)
T ss_dssp CCCGGGCEEE--EETHHHHHHHHHHHHCTTTCCEEEEESC
T ss_pred CCCCCceEEE--EECHHHHHHHHHHHhCchhhcEEEEecc
Confidence 1 235554 777764 677788899999999988753
|
| >1ivy_A Human protective protein; carboxypeptidase, serine carboxypeptidase, protective protei glycoprotein, zymogen; HET: NAG NDG; 2.20A {Homo sapiens} SCOP: c.69.1.5 | Back alignment and structure |
|---|
Probab=97.66 E-value=0.00044 Score=62.55 Aligned_cols=61 Identities=23% Similarity=0.196 Sum_probs=50.1
Q ss_pred CCcEEEEEeCCCCCCCcchHHHHHhcCC----------------------------CCeEEEEecCCCCCCCCCChHHHH
Q 022534 233 DKPVLVAWGISDKYLPQSVAEEFQKGNP----------------------------NVVKLQMIEGAGHMPQEDWPEKVV 284 (295)
Q Consensus 233 ~~P~l~i~G~~D~~~~~~~~~~~~~~~~----------------------------~~~~~~~i~~~gH~~~~e~p~~~~ 284 (295)
.+++|+..|+.|-+++....+...+.+. .+.+++.+.+|||+++.++|++..
T Consensus 361 girVlIYsGD~D~icn~~Gt~~wi~~L~~~~~~~~~pw~~~~~~~~~~vaG~~~~y~nLtf~tV~gAGHmVP~dqP~~al 440 (452)
T 1ivy_A 361 KYQILLYNGDVDMACNFMGDEWFVDSLNQKMEVQRRPWLVKYGDSGEQIAGFVKEFSHIAFLTIKGAGHMVPTDKPLAAF 440 (452)
T ss_dssp CCEEEEEEETTCSSSCHHHHHHHHHHTCCCEEEEEEEEEEECTTSCEEEEEEEEEESSEEEEEETTCCSSHHHHCHHHHH
T ss_pred CceEEEEeCCCCccCCcHHHHHHHHhcCCcccccceeeeeccCCCCcccceEEEEEcceEEEEECCCcccCcccChHHHH
Confidence 5899999999999998776665543332 024677899999999999999999
Q ss_pred HHHHHHHHh
Q 022534 285 DGLRYFFLN 293 (295)
Q Consensus 285 ~~i~~fl~~ 293 (295)
+.++.|+.+
T Consensus 441 ~m~~~fl~g 449 (452)
T 1ivy_A 441 TMFSRFLNK 449 (452)
T ss_dssp HHHHHHHTT
T ss_pred HHHHHHhcC
Confidence 999999975
|
| >1whs_A Serine carboxypeptidase II; HET: NAG FUC; 2.00A {Triticum aestivum} SCOP: c.69.1.5 PDB: 1bcs_A* 1bcr_A* 1wht_A* 3sc2_A* | Back alignment and structure |
|---|
Probab=97.61 E-value=0.00081 Score=55.81 Aligned_cols=123 Identities=16% Similarity=0.177 Sum_probs=73.1
Q ss_pred eeEEeC---cEEEEEEEcCC--CCCCCceEEEEcCCCCCCccc-hhhH------------------HHhhhCCCeEEEeC
Q 022534 14 SYIKSG---EYRWFVRETGS--ADSRLGTIVFLHGAPSHSYSY-RNVM------------------SQMSDAGFHCFAPD 69 (295)
Q Consensus 14 ~~~~~~---~~~~~~~~~g~--~~~~~~~vv~lHG~~~~~~~w-~~~~------------------~~l~~~~~~via~D 69 (295)
-+++++ +..++|..+.. ....+|.+|+++|+|+++..| -.+. --|.+ ...++.+|
T Consensus 22 Gy~~v~~~~~~~lFywf~es~~~~~~~Pl~lwlnGGPGcSS~~~g~~~E~GP~~v~~~~~~l~~N~~sW~~-~anvlfiD 100 (255)
T 1whs_A 22 GYITVDEGAGRSLFYLLQEAPEDAQPAPLVLWLNGGPGCSSVAYGASEELGAFRVKPRGAGLVLNEYRWNK-VANVLFLD 100 (255)
T ss_dssp EEEEEETTTTEEEEEEEECCCGGGCSCCEEEEECCTTTBCTTTTHHHHTSSSEEECGGGCCEEECTTCGGG-TSEEEEEC
T ss_pred EEEECCCCCCcEEEEEEEEecCCCCCCCEEEEECCCCchHHHHHHHHhccCCeEecCCCCeeeeCcccccc-cCCEEEEe
Confidence 355553 66777755432 123468999999999988887 3322 11333 58999999
Q ss_pred CC-CCCCCCCCCCCCCCC-CCCHHHHHHHHHHHHHHh-----CC-CCceEEEEecccc-hHHHHHHHH---hC---cCcc
Q 022534 70 WL-GFGFSDKPEKGYDDF-DFTENEFHEELDKLLDVL-----EV-KYPFFLVVQGFLV-GSYGLTWAL---KN---PSRI 134 (295)
Q Consensus 70 l~-G~G~S~~~~~~~~~~-~~~~~~~~~~l~~~~~~l-----~~-~~~~~lv~~G~~~-G~~~~~~a~---~~---p~~v 134 (295)
+| |-|.|-..... .+ ..+.+..++++.++++.. .. +++++|. |.|- |.++-.+|. +. .=.+
T Consensus 101 qPvGtGfSy~~~~~--~~~~~~~~~~a~~~~~fl~~f~~~fp~~~~~~~yi~--GESYgG~yvp~la~~i~~~n~~~inL 176 (255)
T 1whs_A 101 SPAGVGFSYTNTSS--DIYTSGDNRTAHDSYAFLAKWFERFPHYKYRDFYIA--GESYAGHYVPELSQLVHRSKNPVINL 176 (255)
T ss_dssp CSTTSTTCEESSGG--GGGSCCHHHHHHHHHHHHHHHHHHCGGGTTCEEEEE--EEETHHHHHHHHHHHHHHHTCSSCEE
T ss_pred cCCCCccCCCcCcc--ccccCCHHHHHHHHHHHHHHHHHhCHHhcCCCEEEE--ecCCccccHHHHHHHHHHcCCccccc
Confidence 85 99999643221 12 235566777777776642 12 3467776 5554 445444332 21 2357
Q ss_pred ceeEEEc
Q 022534 135 SKLAILN 141 (295)
Q Consensus 135 ~~lil~~ 141 (295)
+++++.+
T Consensus 177 kGi~ign 183 (255)
T 1whs_A 177 KGFMVGN 183 (255)
T ss_dssp EEEEEEE
T ss_pred ceEEecC
Confidence 8887765
|
| >2d81_A PHB depolymerase; alpha/beta hydrolase fold, circular permutation, hydrolase; HET: NAG RB3; 1.66A {Penicillium funiculosum} SCOP: c.69.1.37 PDB: 2d80_A* | Back alignment and structure |
|---|
Probab=97.58 E-value=0.00037 Score=60.12 Aligned_cols=46 Identities=22% Similarity=0.206 Sum_probs=37.1
Q ss_pred CCcEEEEEeCCCCCCCcchHHHHHhcCCC-----CeEEEEecCCCCCCCCC
Q 022534 233 DKPVLVAWGISDKYLPQSVAEEFQKGNPN-----VVKLQMIEGAGHMPQED 278 (295)
Q Consensus 233 ~~P~l~i~G~~D~~~~~~~~~~~~~~~~~-----~~~~~~i~~~gH~~~~e 278 (295)
+.|++++||++|.++|++.++++.+.+.. .++++.++++||....+
T Consensus 90 ~~Pvli~HG~~D~vVP~~~s~~~~~~L~~~g~~~~ve~~~~~g~gH~~~~~ 140 (318)
T 2d81_A 90 QRKIYMWTGSSDTTVGPNVMNQLKAQLGNFDNSANVSYVTTTGAVHTFPTD 140 (318)
T ss_dssp GCEEEEEEETTCCSSCHHHHHHHHHHHTTTSCGGGEEEEEETTCCSSEEES
T ss_pred CCcEEEEeCCCCCCcCHHHHHHHHHHHHhcCCCcceEEEEeCCCCCCCccC
Confidence 47999999999999999988888764321 36899999999975443
|
| >1p0i_A Cholinesterase; serine hydrolase, butyrate, hydrolase; HET: NAG FUC MES; 2.00A {Homo sapiens} SCOP: c.69.1.1 PDB: 1p0m_A* 1p0p_A* 1p0q_A* 1xlu_A* 1xlv_A* 1xlw_A* 2wsl_A* 2pm8_A* 3djy_A* 3dkk_A* 2wij_A* 2wif_A* 2wik_A* 2y1k_A* 2j4c_A* 2xmb_A* 2xmc_A* 2xmd_A* 2xmg_A* 2wig_A* ... | Back alignment and structure |
|---|
Probab=97.49 E-value=0.00053 Score=63.46 Aligned_cols=120 Identities=11% Similarity=0.019 Sum_probs=65.2
Q ss_pred cEEEEEEEcCCCCCCCceEEEEcCCC---CCCccchhhHHHhhh-CCCeEEEeCCC----CCCCCC-CCCCCCCCCCCCH
Q 022534 20 EYRWFVRETGSADSRLGTIVFLHGAP---SHSYSYRNVMSQMSD-AGFHCFAPDWL----GFGFSD-KPEKGYDDFDFTE 90 (295)
Q Consensus 20 ~~~~~~~~~g~~~~~~~~vv~lHG~~---~~~~~w~~~~~~l~~-~~~~via~Dl~----G~G~S~-~~~~~~~~~~~~~ 90 (295)
...+++........+.|+||++||++ ++..........|++ .|+-|++++.| ||+.+. .+.. ...+.+
T Consensus 92 cl~lnv~~P~~~~~~~Pv~v~iHGGg~~~g~~~~~~~~~~~la~~~~~vvv~~nYRlg~~Gf~~~~~~~~~---~~n~gl 168 (529)
T 1p0i_A 92 CLYLNVWIPAPKPKNATVLIWIYGGGFQTGTSSLHVYDGKFLARVERVIVVSMNYRVGALGFLALPGNPEA---PGNMGL 168 (529)
T ss_dssp CCEEEEEEESSCCSSEEEEEEECCSTTTSCCTTCGGGCTHHHHHHHCCEEEEECCCCHHHHHCCCTTCTTS---CSCHHH
T ss_pred CCeEEEeeCCCCCCCCeEEEEECCCccccCCCCccccChHHHhccCCeEEEEecccccccccccCCCCCCC---cCcccH
Confidence 34444433222223468999999965 333332233455654 58999999999 676662 2211 123345
Q ss_pred HHHHHHHHHHHHHh---CCC-CceEEEEecccchH-HHHHHHHh--CcCccceeEEEcCCC
Q 022534 91 NEFHEELDKLLDVL---EVK-YPFFLVVQGFLVGS-YGLTWALK--NPSRISKLAILNSPL 144 (295)
Q Consensus 91 ~~~~~~l~~~~~~l---~~~-~~~~lv~~G~~~G~-~~~~~a~~--~p~~v~~lil~~~p~ 144 (295)
.|+...+.-+.+.+ +.+ ..+.++ |+|.|+ .+..++.. .+..+++.|+.++..
T Consensus 169 ~D~~~al~wv~~~i~~fggdp~~vti~--G~SaGg~~~~~~~~~~~~~~lf~~~i~~Sg~~ 227 (529)
T 1p0i_A 169 FDQQLALQWVQKNIAAFGGNPKSVTLF--GESAGAASVSLHLLSPGSHSLFTRAILQSGSF 227 (529)
T ss_dssp HHHHHHHHHHHHHGGGGTEEEEEEEEE--EETHHHHHHHHHHHCGGGGGGCSEEEEESCCT
T ss_pred HHHHHHHHHHHHHHHHhCCChhheEEe--eccccHHHHHHHHhCccchHHHHHHHHhcCcc
Confidence 56655555444433 333 235555 666664 33333332 245788888886543
|
| >2ha2_A ACHE, acetylcholinesterase; hydrolase fold, serine esterase, homod glycosylated protein, hydrolase; HET: NAG FUC SCK SCU P6G; 2.05A {Mus musculus} SCOP: c.69.1.1 PDB: 1j07_A* 1mah_A* 1j06_A* 1n5r_A* 2gyv_A* 2gyw_A* 2h9y_A* 2ha0_A* 2gyu_A* 2ha3_A* 2wls_A* 4a23_A* 2c0q_A* 2jey_A* 2jgm_A* 2whr_A* 2c0p_A* 1ku6_A* 1q84_A* 1q83_A* ... | Back alignment and structure |
|---|
Probab=97.44 E-value=0.00071 Score=62.78 Aligned_cols=119 Identities=11% Similarity=-0.007 Sum_probs=64.5
Q ss_pred CcEEEEEEEcCC-CCCCCceEEEEcCCC---CCCccchhhHHHhhh-CCCeEEEeCCC----CCCCCC-CCCCCCCCCCC
Q 022534 19 GEYRWFVRETGS-ADSRLGTIVFLHGAP---SHSYSYRNVMSQMSD-AGFHCFAPDWL----GFGFSD-KPEKGYDDFDF 88 (295)
Q Consensus 19 ~~~~~~~~~~g~-~~~~~~~vv~lHG~~---~~~~~w~~~~~~l~~-~~~~via~Dl~----G~G~S~-~~~~~~~~~~~ 88 (295)
+...+++-.... ...+.|+||++||++ ++..........|++ .|+-|+.+|.| ||+.+. .+.. ...+
T Consensus 95 dcl~l~v~~P~~~~~~~~Pviv~iHGGg~~~g~~~~~~~~~~~la~~~g~vvv~~nYRlg~~Gf~~~~~~~~~---~~n~ 171 (543)
T 2ha2_A 95 DCLYLNVWTPYPRPASPTPVLIWIYGGGFYSGAASLDVYDGRFLAQVEGAVLVSMNYRVGTFGFLALPGSREA---PGNV 171 (543)
T ss_dssp CCCEEEEEEESSCCSSCEEEEEEECCSTTTCCCTTSGGGCTHHHHHHHCCEEEEECCCCHHHHHCCCTTCSSC---CSCH
T ss_pred cCCeEEEeecCCCCCCCCeEEEEECCCccccCCCCCCcCChHHHHhcCCEEEEEecccccccccccCCCCCCC---CCcc
Confidence 445555433322 222348999999975 333322233455654 58999999999 666652 2211 1233
Q ss_pred CHHHHHHHHHHHHHHh---CCC-CceEEEEecccchH-HHHHHHHh--CcCccceeEEEcC
Q 022534 89 TENEFHEELDKLLDVL---EVK-YPFFLVVQGFLVGS-YGLTWALK--NPSRISKLAILNS 142 (295)
Q Consensus 89 ~~~~~~~~l~~~~~~l---~~~-~~~~lv~~G~~~G~-~~~~~a~~--~p~~v~~lil~~~ 142 (295)
.+.|....+.-+.+.+ +.+ +.+.++ |+|.|+ .+..+++. .+..+++.|+.++
T Consensus 172 gl~D~~~al~wv~~~i~~fggDp~~v~i~--G~SaGg~~~~~~~~~~~~~~lf~~~i~~sg 230 (543)
T 2ha2_A 172 GLLDQRLALQWVQENIAAFGGDPMSVTLF--GESAGAASVGMHILSLPSRSLFHRAVLQSG 230 (543)
T ss_dssp HHHHHHHHHHHHHHHGGGGTEEEEEEEEE--EETHHHHHHHHHHHSHHHHTTCSEEEEESC
T ss_pred cHHHHHHHHHHHHHHHHHhCCChhheEEE--eechHHHHHHHHHhCcccHHhHhhheeccC
Confidence 4556655555444443 332 235555 666654 33333332 2457888888764
|
| >1ea5_A ACHE, acetylcholinesterase; hydrolase, serine hydrolase, neurotransmitter cleavage, catalytic triad, alpha/beta hydrolase; HET: NAG; 1.80A {Torpedo californica} SCOP: c.69.1.1 PDB: 1ax9_A* 1amn_A* 1cfj_A* 1fss_A* 1gpk_A* 1gpn_A* 1oce_A* 1qid_A 1qie_A 1qif_A 1qig_A 1qih_A 1qii_A 1qij_A 1qik_A 1qim_A 1qti_A* 1vot_A* 1vxo_A* 1vxr_A* ... | Back alignment and structure |
|---|
Probab=97.40 E-value=0.0007 Score=62.74 Aligned_cols=121 Identities=9% Similarity=-0.030 Sum_probs=65.8
Q ss_pred CcEEEEEEEcCCCCCCCceEEEEcCCC---CCCccchhhHHHhh-hCCCeEEEeCCC----CCCCC-CCCCCCCCCCCCC
Q 022534 19 GEYRWFVRETGSADSRLGTIVFLHGAP---SHSYSYRNVMSQMS-DAGFHCFAPDWL----GFGFS-DKPEKGYDDFDFT 89 (295)
Q Consensus 19 ~~~~~~~~~~g~~~~~~~~vv~lHG~~---~~~~~w~~~~~~l~-~~~~~via~Dl~----G~G~S-~~~~~~~~~~~~~ 89 (295)
+...+++........+.|+||++||.+ ++..........|+ +.|+-|++++.| ||+.+ ..+.. ...+.
T Consensus 93 dcl~lnv~~P~~~~~~~Pv~v~iHGG~~~~g~~~~~~~~~~~la~~~~~vvv~~nYRlg~~Gf~~~~~~~~~---~~n~g 169 (537)
T 1ea5_A 93 DCLYLNIWVPSPRPKSTTVMVWIYGGGFYSGSSTLDVYNGKYLAYTEEVVLVSLSYRVGAFGFLALHGSQEA---PGNVG 169 (537)
T ss_dssp CCCEEEEEECSSCCSSEEEEEEECCSTTTCCCTTCGGGCTHHHHHHHTCEEEECCCCCHHHHHCCCTTCSSS---CSCHH
T ss_pred cCCeEEEeccCCCCCCCeEEEEECCCcccCCCCCCCccChHHHHhcCCEEEEEeccCccccccccCCCCCCC---cCccc
Confidence 345555433322223468999999964 33333223345565 558999999999 66655 22111 12334
Q ss_pred HHHHHHHHHHHHHHh---CCC-CceEEEEecccchH-HHHHHHHh--CcCccceeEEEcCCC
Q 022534 90 ENEFHEELDKLLDVL---EVK-YPFFLVVQGFLVGS-YGLTWALK--NPSRISKLAILNSPL 144 (295)
Q Consensus 90 ~~~~~~~l~~~~~~l---~~~-~~~~lv~~G~~~G~-~~~~~a~~--~p~~v~~lil~~~p~ 144 (295)
+.|....+.-+.+.+ +.+ ..+.|+ |+|.|+ .+..++.. .+..+++.|+.+...
T Consensus 170 l~D~~~al~wv~~ni~~fggdp~~vtl~--G~SaGg~~~~~~~~~~~~~~lf~~~i~~Sg~~ 229 (537)
T 1ea5_A 170 LLDQRMALQWVHDNIQFFGGDPKTVTIF--GESAGGASVGMHILSPGSRDLFRRAILQSGSP 229 (537)
T ss_dssp HHHHHHHHHHHHHHGGGGTEEEEEEEEE--EETHHHHHHHHHHHCHHHHTTCSEEEEESCCT
T ss_pred cHHHHHHHHHHHHHHHHhCCCccceEEE--ecccHHHHHHHHHhCccchhhhhhheeccCCc
Confidence 556655555444443 332 235565 666654 33333332 245788888886543
|
| >4az3_B Lysosomal protective protein 20 kDa chain; hydrolase, drug discovery, carboxypeptidase, cardiovascular; HET: NAG S35; 2.04A {Homo sapiens} PDB: 4az0_B* | Back alignment and structure |
|---|
Probab=97.16 E-value=0.00063 Score=52.18 Aligned_cols=61 Identities=23% Similarity=0.196 Sum_probs=49.9
Q ss_pred CCcEEEEEeCCCCCCCcchHHHHHhcCC----------------------------CCeEEEEecCCCCCCCCCChHHHH
Q 022534 233 DKPVLVAWGISDKYLPQSVAEEFQKGNP----------------------------NVVKLQMIEGAGHMPQEDWPEKVV 284 (295)
Q Consensus 233 ~~P~l~i~G~~D~~~~~~~~~~~~~~~~----------------------------~~~~~~~i~~~gH~~~~e~p~~~~ 284 (295)
.+++|+..|+.|-+++....+.+.+.+. .+.+++.+.+|||+++.++|+...
T Consensus 63 girVliy~Gd~D~icn~~G~~~~i~~L~w~~~~~~~~w~~~~~~~~~~vaG~~~~~~nLtf~~V~~AGHmVP~dqP~~al 142 (155)
T 4az3_B 63 KYQILLYNGDVDMACNFMGDEWFVDSLNQKMEVQRRPWLVKYGDSGEQIAGFVKEFSHIAFLTIKGAGHMVPTDKPLAAF 142 (155)
T ss_dssp CCEEEEEEETTCSSSCHHHHHHHHHHTCCSSCCCCEEEEEEETTTEEEEEEEEEEETTEEEEEETTCCSCHHHHCHHHHH
T ss_pred CceEEEEecccCcccCcHhHHHHHHhcccccccccccceeecccCCCEEEEEEEEeCCEEEEEECCCcCcChhhCHHHHH
Confidence 6899999999999998766655433321 124678899999999999999999
Q ss_pred HHHHHHHHh
Q 022534 285 DGLRYFFLN 293 (295)
Q Consensus 285 ~~i~~fl~~ 293 (295)
+.+++||.+
T Consensus 143 ~m~~~fl~g 151 (155)
T 4az3_B 143 TMFSRFLNK 151 (155)
T ss_dssp HHHHHHHTT
T ss_pred HHHHHHHcC
Confidence 999999976
|
| >2h7c_A Liver carboxylesterase 1; enzyme, cholesteryl esterase, hydrolase; HET: NAG NDG SIA COA; 2.00A {Homo sapiens} SCOP: c.69.1.1 PDB: 2dqy_A* 2dr0_A* 2dqz_A* 1mx1_A* 1mx5_A* 1mx9_A* 4ab1_A* 1ya4_A* 1yah_A* 1yaj_A* 1ya8_A* 2hrr_A* 2hrq_A* 3k9b_A* 1k4y_A* | Back alignment and structure |
|---|
Probab=97.13 E-value=0.002 Score=59.73 Aligned_cols=104 Identities=13% Similarity=0.139 Sum_probs=59.4
Q ss_pred CCceEEEEcCCC---CCCccchhhHHHhhh-CCCeEEEeCCC----CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh-
Q 022534 34 RLGTIVFLHGAP---SHSYSYRNVMSQMSD-AGFHCFAPDWL----GFGFSDKPEKGYDDFDFTENEFHEELDKLLDVL- 104 (295)
Q Consensus 34 ~~~~vv~lHG~~---~~~~~w~~~~~~l~~-~~~~via~Dl~----G~G~S~~~~~~~~~~~~~~~~~~~~l~~~~~~l- 104 (295)
+.|+||++||.+ ++...|... .|++ .|+-|+.+|.| |++.+..... ...+.+.|+...+.-+.+.+
T Consensus 114 ~~Pv~v~iHGG~~~~g~~~~~~~~--~la~~~g~vvv~~nYRlg~~gf~~~~~~~~---~~n~gl~D~~~al~wv~~ni~ 188 (542)
T 2h7c_A 114 RLPVMVWIHGGGLMVGAASTYDGL--ALAAHENVVVVTIQYRLGIWGFFSTGDEHS---RGNWGHLDQVAALRWVQDNIA 188 (542)
T ss_dssp CEEEEEEECCSTTTSCCSTTSCCH--HHHHHHTCEEEEECCCCHHHHHCCCSSTTC---CCCHHHHHHHHHHHHHHHHGG
T ss_pred CCCEEEEECCCcccCCCccccCHH--HHHhcCCEEEEecCCCCccccCCCCCcccC---ccchhHHHHHHHHHHHHHHHH
Confidence 468999999964 333334332 3443 58999999999 7776643221 11334455555544444433
Q ss_pred --CCC-CceEEEEecccchH-HHHHHHHh--CcCccceeEEEcCCC
Q 022534 105 --EVK-YPFFLVVQGFLVGS-YGLTWALK--NPSRISKLAILNSPL 144 (295)
Q Consensus 105 --~~~-~~~~lv~~G~~~G~-~~~~~a~~--~p~~v~~lil~~~p~ 144 (295)
+.+ ..+.++ |+|.|+ ++..++.. .+..+++.|+.++..
T Consensus 189 ~fggDp~~Vtl~--G~SaGg~~~~~~~~~~~~~~lf~~ai~~Sg~~ 232 (542)
T 2h7c_A 189 SFGGNPGSVTIF--GESAGGESVSVLVLSPLAKNLFHRAISESGVA 232 (542)
T ss_dssp GGTEEEEEEEEE--EETHHHHHHHHHHHCGGGTTSCSEEEEESCCT
T ss_pred HcCCCccceEEE--EechHHHHHHHHHhhhhhhHHHHHHhhhcCCc
Confidence 332 235555 667664 34344333 356888888886533
|
| >2fj0_A JuvenIle hormone esterase; manduca sexta, alpha-beta hydrolase; HET: TFC; 2.70A {Trichoplusia NI} | Back alignment and structure |
|---|
Probab=97.12 E-value=0.0011 Score=61.69 Aligned_cols=104 Identities=12% Similarity=0.060 Sum_probs=59.3
Q ss_pred CceEEEEcCCC---CCCccchhhHHHhhhCCCeEEEeCCCC----CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH---h
Q 022534 35 LGTIVFLHGAP---SHSYSYRNVMSQMSDAGFHCFAPDWLG----FGFSDKPEKGYDDFDFTENEFHEELDKLLDV---L 104 (295)
Q Consensus 35 ~~~vv~lHG~~---~~~~~w~~~~~~l~~~~~~via~Dl~G----~G~S~~~~~~~~~~~~~~~~~~~~l~~~~~~---l 104 (295)
.|+||++||.+ ++..........|++.|+-|+++|.|. |+.+..... ...+.+.|....+.-+.+. .
T Consensus 115 ~Pviv~iHGGg~~~g~~~~~~~~~~~l~~~g~vvv~~nYRl~~~Gf~~~~~~~~---~~n~gl~D~~~al~wv~~~i~~f 191 (551)
T 2fj0_A 115 LPVLVFIHGGGFAFGSGDSDLHGPEYLVSKDVIVITFNYRLNVYGFLSLNSTSV---PGNAGLRDMVTLLKWVQRNAHFF 191 (551)
T ss_dssp EEEEEEECCSTTTSCCSCTTTCBCTTGGGGSCEEEEECCCCHHHHHCCCSSSSC---CSCHHHHHHHHHHHHHHHHTGGG
T ss_pred CCEEEEEcCCccccCCCcccccCHHHHHhCCeEEEEeCCcCCccccccCcccCC---CCchhHHHHHHHHHHHHHHHHHh
Confidence 58999999954 333322233456666799999999993 444432111 1123455665555444443 2
Q ss_pred CCC-CceEEEEecccchH-HHHHHHHh--CcCccceeEEEcCC
Q 022534 105 EVK-YPFFLVVQGFLVGS-YGLTWALK--NPSRISKLAILNSP 143 (295)
Q Consensus 105 ~~~-~~~~lv~~G~~~G~-~~~~~a~~--~p~~v~~lil~~~p 143 (295)
+.+ +.+.++ |+|.|+ ++..++.. .+..++++|+.++.
T Consensus 192 ggDp~~v~l~--G~SaGg~~~~~~~~~~~~~~lf~~~i~~sg~ 232 (551)
T 2fj0_A 192 GGRPDDVTLM--GQSAGAAATHILSLSKAADGLFRRAILMSGT 232 (551)
T ss_dssp TEEEEEEEEE--EETHHHHHHHHHTTCGGGTTSCSEEEEESCC
T ss_pred CCChhhEEEE--EEChHHhhhhccccCchhhhhhhheeeecCC
Confidence 332 235555 666664 44444433 45678889888643
|
| >1gxs_A P-(S)-hydroxymandelonitrIle lyase chain A; inhibitor complex, cyanogenesis mechanism; HET: NAG FUL DKA; 2.3A {Sorghum bicolor} SCOP: c.69.1.5 | Back alignment and structure |
|---|
Probab=97.07 E-value=0.0081 Score=50.17 Aligned_cols=122 Identities=13% Similarity=0.217 Sum_probs=69.3
Q ss_pred eeEEeC---cEEEEEEEcCC---CCCCCceEEEEcCCCCCCccc-hhhHH------------------HhhhCCCeEEEe
Q 022534 14 SYIKSG---EYRWFVRETGS---ADSRLGTIVFLHGAPSHSYSY-RNVMS------------------QMSDAGFHCFAP 68 (295)
Q Consensus 14 ~~~~~~---~~~~~~~~~g~---~~~~~~~vv~lHG~~~~~~~w-~~~~~------------------~l~~~~~~via~ 68 (295)
-+++++ +..+||..+.. ....+|.+|+++|+++++..| -.+.+ -|.+ ...++.+
T Consensus 27 Gyv~v~~~~~~~lFywf~es~~~~p~~~Pl~lWlnGGPGcSS~~~g~~~E~GP~~v~~~~~~l~~N~~SW~~-~anllfi 105 (270)
T 1gxs_A 27 GYVTIDDNNGRALYYWFQEADTADPAAAPLVLWLNGGPGCSSIGLGAMQELGAFRVHTNGESLLLNEYAWNK-AANILFA 105 (270)
T ss_dssp EEEEEETTTTEEEEEEEECCCSSCGGGSCEEEEEECTTTBCTTTTHHHHTTSSEEECTTSSCEEECTTCGGG-TSEEEEE
T ss_pred EEEEcCCCCCcEEEEEEEEecCCCCCCCCEEEEecCCCcccchhhhhHHhccCceecCCCCcceeCccchhc-cccEEEE
Confidence 355552 46677754432 223368999999999988886 43321 0222 4789999
Q ss_pred CC-CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH----h-CC-CCceEEEEecccchHHHHHHHH---hCc-----Cc
Q 022534 69 DW-LGFGFSDKPEKGYDDFDFTENEFHEELDKLLDV----L-EV-KYPFFLVVQGFLVGSYGLTWAL---KNP-----SR 133 (295)
Q Consensus 69 Dl-~G~G~S~~~~~~~~~~~~~~~~~~~~l~~~~~~----l-~~-~~~~~lv~~G~~~G~~~~~~a~---~~p-----~~ 133 (295)
|+ .|-|.|-..... .+..+.+..++++.++++. . .. +++++|. |.| |.++-.+|. +.. =.
T Consensus 106 DqPvGtGfSy~~~~~--~~~~~d~~~a~d~~~fl~~f~~~fp~~~~~~~yi~--GES-G~yvP~la~~i~~~n~~~~~in 180 (270)
T 1gxs_A 106 ESPAGVGFSYSNTSS--DLSMGDDKMAQDTYTFLVKWFERFPHYNYREFYIA--GES-GHFIPQLSQVVYRNRNNSPFIN 180 (270)
T ss_dssp CCSTTSTTCEESSGG--GGCCCHHHHHHHHHHHHHHHHHHCGGGTTSEEEEE--EEC-TTHHHHHHHHHHHTTTTCTTCE
T ss_pred eccccccccCCCCCc--cccCCcHHHHHHHHHHHHHHHHhChhhcCCCEEEE--eCC-CcchHHHHHHHHhcccccccee
Confidence 97 599998643211 1112334456666555554 2 12 3467776 667 765433332 332 25
Q ss_pred cceeEEEc
Q 022534 134 ISKLAILN 141 (295)
Q Consensus 134 v~~lil~~ 141 (295)
++++++-+
T Consensus 181 LkGi~ign 188 (270)
T 1gxs_A 181 FQGLLVSS 188 (270)
T ss_dssp EEEEEEES
T ss_pred eeeEEEeC
Confidence 77777664
|
| >3gff_A IROE-like serine hydrolase; NP_718593.1, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; 2.12A {Shewanella oneidensis} | Back alignment and structure |
|---|
Probab=96.95 E-value=0.0026 Score=55.07 Aligned_cols=60 Identities=17% Similarity=0.226 Sum_probs=40.2
Q ss_pred CCcEEEEEeCCCCC-------CCcchHHHH----HhcCCC--CeEEEEecCCCCCCCCCChHHHHHHHHHHHHhc
Q 022534 233 DKPVLVAWGISDKY-------LPQSVAEEF----QKGNPN--VVKLQMIEGAGHMPQEDWPEKVVDGLRYFFLNY 294 (295)
Q Consensus 233 ~~P~l~i~G~~D~~-------~~~~~~~~~----~~~~~~--~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~ 294 (295)
+.|+++.+|++|.. ++.+.+.++ ++..+. .+++.++|+.+|.... +..+.+.++.++..+
T Consensus 194 ~~~l~l~~G~~d~~~~~~~~~~~~~~~~~l~~~Lk~~~~~g~~~~~~~~pg~~H~sv~--~~~~~~~l~~lf~~~ 266 (331)
T 3gff_A 194 QKQLFMAIANNPLSPGFGVSSYHKDLNLAFADKLTKLAPKGLGFMAKYYPEETHQSVS--HIGLYDGIRHLFKDF 266 (331)
T ss_dssp SEEEEEEECCCSEETTTEECCHHHHHHHHHHHHHHHHCCTTEEEEEEECTTCCTTTHH--HHHHHHHHHHHHGGG
T ss_pred CCeEEEEeCCCCCCCccchHHHHHHHHHHHHHHHHhccCCCceEEEEECCCCCccccH--HHHHHHHHHHHHhhc
Confidence 58999999999972 333333333 333221 4688999999998644 677777777776553
|
| >1gxs_B P-(S)-hydroxymandelonitrIle lyase chain B; inhibitor complex, cyanogenesis mechanism; HET: NAG FUL DKA; 2.3A {Sorghum bicolor} SCOP: c.69.1.5 | Back alignment and structure |
|---|
Probab=96.94 E-value=0.0016 Score=50.12 Aligned_cols=61 Identities=20% Similarity=0.219 Sum_probs=50.3
Q ss_pred CCcEEEEEeCCCCCCCcchHHHHHhcCC--------------------------CCeEEEEecCCCCCCCCCChHHHHHH
Q 022534 233 DKPVLVAWGISDKYLPQSVAEEFQKGNP--------------------------NVVKLQMIEGAGHMPQEDWPEKVVDG 286 (295)
Q Consensus 233 ~~P~l~i~G~~D~~~~~~~~~~~~~~~~--------------------------~~~~~~~i~~~gH~~~~e~p~~~~~~ 286 (295)
.+++|+..|+.|-+++....+...+.+. .+.+++.+.+|||+++.++|+...+.
T Consensus 66 girVliysGd~D~i~~~~Gt~~wi~~L~w~~~~~~~~w~~~~~~~~vaG~~~~~~nLtf~~V~~AGHmVP~dqP~~al~m 145 (158)
T 1gxs_B 66 GLRVWVYSGDTDSVVPVSSTRRSLAALELPVKTSWYPWYMAPTEREVGGWSVQYEGLTYVTVRGAGHLVPVHRPAQAFLL 145 (158)
T ss_dssp TCEEEEEEETTCSSSCHHHHHHHHHTTCCCEEEEEEEEESSTTCCSEEEEEEEETTEEEEEETTCCSSHHHHCHHHHHHH
T ss_pred CCeEEEEecccCccCCcHHHHHHHHHCCCcccCCccceEECCCCCcccceEEEeCCEEEEEECCCcccCcccCcHHHHHH
Confidence 5899999999999998776665544331 01467889999999999999999999
Q ss_pred HHHHHHh
Q 022534 287 LRYFFLN 293 (295)
Q Consensus 287 i~~fl~~ 293 (295)
++.|+.+
T Consensus 146 ~~~fl~g 152 (158)
T 1gxs_B 146 FKQFLKG 152 (158)
T ss_dssp HHHHHHT
T ss_pred HHHHHcC
Confidence 9999976
|
| >4fol_A FGH, S-formylglutathione hydrolase; D-type esterase, oxidation sensor motif, esterase activity activation, esterase activity inhibition; 2.07A {Saccharomyces cerevisiae} PDB: 1pv1_A 3c6b_A* 4flm_A* | Back alignment and structure |
|---|
Probab=96.93 E-value=0.034 Score=47.29 Aligned_cols=104 Identities=20% Similarity=0.245 Sum_probs=55.8
Q ss_pred CceEEEEcCCCCCCccchhh---HHHhhhCCCeEEEeCCCCCC-------CCCCC----CCCCCC-------CCCCH-HH
Q 022534 35 LGTIVFLHGAPSHSYSYRNV---MSQMSDAGFHCFAPDWLGFG-------FSDKP----EKGYDD-------FDFTE-NE 92 (295)
Q Consensus 35 ~~~vv~lHG~~~~~~~w~~~---~~~l~~~~~~via~Dl~G~G-------~S~~~----~~~~~~-------~~~~~-~~ 92 (295)
-|+|.+|||.+++...|... ....++.+..++++|..--+ .+... ...+.+ ..+.. +.
T Consensus 49 ~PVLYlLhG~~~~~~~w~~~~~~~~~~~~~~~~~v~p~~~p~~~~~~~~~~~~~~~g~~~~~y~d~~~~p~~~~~~~~~~ 128 (299)
T 4fol_A 49 IPTVFYLSGLTCTPDNASEKAFWQFQADKYGFAIVFPDTSPRGDEVANDPEGSWDFGQGAGFYLNATQEPYAQHYQMYDY 128 (299)
T ss_dssp BCEEEEECCTTCCHHHHHHHSCHHHHHHHHTCEEEEECSSCCSTTSCCCTTCCSSSBTTBCTTCBCCSHHHHTTCBHHHH
T ss_pred cCEEEEECCCCCChHHHHHhchHhHHHHHcCchhhccCCCcceeecCCCcccccccccCCccccccccCccccCccHHHH
Confidence 47899999999998888643 22333446788888853211 11000 000000 01122 34
Q ss_pred HHHHHHHHHHH-hCCC--------CceEEEEecccchHH-HHHHHHhC--cCccceeEEE
Q 022534 93 FHEELDKLLDV-LEVK--------YPFFLVVQGFLVGSY-GLTWALKN--PSRISKLAIL 140 (295)
Q Consensus 93 ~~~~l~~~~~~-l~~~--------~~~~lv~~G~~~G~~-~~~~a~~~--p~~v~~lil~ 140 (295)
++++|..++++ +... ....+. |+|||+. |+.+|+++ |++..++.-.
T Consensus 129 l~~EL~~~i~~~f~~~~~r~~~~r~~~~i~--G~SMGG~gAl~~al~~~~~~~~~~~~s~ 186 (299)
T 4fol_A 129 IHKELPQTLDSHFNKNGDVKLDFLDNVAIT--GISMGGYGAICGYLKGYSGKRYKSCSAF 186 (299)
T ss_dssp HHTHHHHHHHHHHCC-----BCSSSSEEEE--EBTHHHHHHHHHHHHTGGGTCCSEEEEE
T ss_pred HHHHhHHHHHHhcccccccccccccceEEE--ecCchHHHHHHHHHhCCCCCceEEEEec
Confidence 56777777774 3221 113333 8888776 45677886 5566555443
|
| >4ebb_A Dipeptidyl peptidase 2; hydrolase; HET: MSE NAG; 2.00A {Homo sapiens} PDB: 3jyh_A* 3n0t_A* | Back alignment and structure |
|---|
Probab=96.88 E-value=0.021 Score=51.86 Aligned_cols=83 Identities=14% Similarity=0.139 Sum_probs=57.4
Q ss_pred CCeEEEeCCCCCCCCCCCCC---CCCCCCC-CHHHHHHHHHHHHHHhC----C-CCceEEEEecccchHHHHHHHHhCcC
Q 022534 62 GFHCFAPDWLGFGFSDKPEK---GYDDFDF-TENEFHEELDKLLDVLE----V-KYPFFLVVQGFLVGSYGLTWALKNPS 132 (295)
Q Consensus 62 ~~~via~Dl~G~G~S~~~~~---~~~~~~~-~~~~~~~~l~~~~~~l~----~-~~~~~lv~~G~~~G~~~~~~a~~~p~ 132 (295)
|--+|+.-+|=||+|..-.. ...+..| +.++-..|++.|++.+. . +.|++++|++. +|++++-+-.+||+
T Consensus 73 ~a~~v~lEHRyYG~S~P~~~~st~~~nL~yLt~eQALaD~a~fi~~~k~~~~~~~~pwI~~GGSY-~G~LaAW~R~kYP~ 151 (472)
T 4ebb_A 73 GALLVFAEHRYYGKSLPFGAQSTQRGHTELLTVEQALADFAELLRALRRDLGAQDAPAIAFGGSY-GGMLSAYLRMKYPH 151 (472)
T ss_dssp TCEEEEECCTTSTTCCTTGGGGGSTTSCTTCSHHHHHHHHHHHHHHHHHHTTCTTCCEEEEEETH-HHHHHHHHHHHCTT
T ss_pred CCeEEEEecccccCCcCCCCCCccccccccCCHHHHHHHHHHHHHHHHhhcCCCCCCEEEEccCc-cchhhHHHHhhCCC
Confidence 45799999999999974210 0012222 77777788888887653 2 34677765433 67777777789999
Q ss_pred ccceeEEEcCCCC
Q 022534 133 RISKLAILNSPLT 145 (295)
Q Consensus 133 ~v~~lil~~~p~~ 145 (295)
.|.+-+..++|..
T Consensus 152 lv~ga~ASSApv~ 164 (472)
T 4ebb_A 152 LVAGALAASAPVL 164 (472)
T ss_dssp TCSEEEEETCCTT
T ss_pred eEEEEEecccceE
Confidence 9999888777764
|
| >1ukc_A ESTA, esterase; fungi, A/B hydrolase fold, acetylcholinesterase, H; HET: NAG MAN; 2.10A {Aspergillus niger} SCOP: c.69.1.17 | Back alignment and structure |
|---|
Probab=96.83 E-value=0.0023 Score=59.09 Aligned_cols=107 Identities=14% Similarity=0.094 Sum_probs=57.1
Q ss_pred CCceEEEEcCCC---CCCccchhhHHHh-hhCCCeEEEeCCC----CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh-
Q 022534 34 RLGTIVFLHGAP---SHSYSYRNVMSQM-SDAGFHCFAPDWL----GFGFSDKPEKGYDDFDFTENEFHEELDKLLDVL- 104 (295)
Q Consensus 34 ~~~~vv~lHG~~---~~~~~w~~~~~~l-~~~~~~via~Dl~----G~G~S~~~~~~~~~~~~~~~~~~~~l~~~~~~l- 104 (295)
+.|+||++||++ ++...|....-.. ...|+-|+++|.| ||+.++...... ...+.+.|....+.-+.+.+
T Consensus 101 ~~Pviv~iHGGg~~~g~~~~~~~~~~~~~~~~g~vvv~~nYRlg~~Gf~~~~~~~~~~-~~n~gl~D~~~al~wv~~ni~ 179 (522)
T 1ukc_A 101 KLPVWLFIQGGGYAENSNANYNGTQVIQASDDVIVFVTFNYRVGALGFLASEKVRQNG-DLNAGLLDQRKALRWVKQYIE 179 (522)
T ss_dssp CEEEEEEECCSTTTSCCSCSCCCHHHHHHTTSCCEEEEECCCCHHHHHCCCHHHHHSS-CTTHHHHHHHHHHHHHHHHGG
T ss_pred CCCEEEEECCCccccCCccccCcHHHHHhcCCcEEEEEecccccccccccchhccccC-CCChhHHHHHHHHHHHHHHHH
Confidence 458999999975 2333343321111 2348999999999 777665311000 11234555555554444433
Q ss_pred --CCC-CceEEEEecccchH-HHHHHHHhC----cCccceeEEEcCC
Q 022534 105 --EVK-YPFFLVVQGFLVGS-YGLTWALKN----PSRISKLAILNSP 143 (295)
Q Consensus 105 --~~~-~~~~lv~~G~~~G~-~~~~~a~~~----p~~v~~lil~~~p 143 (295)
+.+ +.+.++ |+|.|+ .+...++.. +..+++.|+.+..
T Consensus 180 ~fggDp~~v~i~--G~SaGg~~v~~~l~~~~~~~~~lf~~~i~~sg~ 224 (522)
T 1ukc_A 180 QFGGDPDHIVIH--GVSAGAGSVAYHLSAYGGKDEGLFIGAIVESSF 224 (522)
T ss_dssp GGTEEEEEEEEE--EETHHHHHHHHHHTGGGTCCCSSCSEEEEESCC
T ss_pred HcCCCchhEEEE--EEChHHHHHHHHHhCCCccccccchhhhhcCCC
Confidence 332 235555 666654 333333222 5678888877543
|
| >1dx4_A ACHE, acetylcholinesterase; hydrolase, serine esterase, synapse, membrane, nerve, muscle neurotransmitter degradation, glycoprotein; HET: NAG MAN BMA 760; 2.70A {Drosophila melanogaster} SCOP: c.69.1.1 PDB: 1qo9_A* 1qon_A* | Back alignment and structure |
|---|
Probab=96.74 E-value=0.0034 Score=58.72 Aligned_cols=107 Identities=10% Similarity=-0.028 Sum_probs=57.1
Q ss_pred CCceEEEEcCCC---CCCccchhhHHHhhh-CCCeEEEeCCC----CCCCCCCC-----CCCCCCCCCCHHHHHHHHHHH
Q 022534 34 RLGTIVFLHGAP---SHSYSYRNVMSQMSD-AGFHCFAPDWL----GFGFSDKP-----EKGYDDFDFTENEFHEELDKL 100 (295)
Q Consensus 34 ~~~~vv~lHG~~---~~~~~w~~~~~~l~~-~~~~via~Dl~----G~G~S~~~-----~~~~~~~~~~~~~~~~~l~~~ 100 (295)
+.|+||++||.+ ++...+......|++ .++-|+++|.| ||+.+... .... ...+.+.|+...+.-+
T Consensus 140 ~~PV~v~iHGGg~~~g~~~~~~~~~~~l~~~~~~vvv~~nYRlg~~Gfl~~~~~~~~~~~~~~-~~n~gl~D~~~al~wv 218 (585)
T 1dx4_A 140 GLPILIWIYGGGFMTGSATLDIYNADIMAAVGNVIVASFQYRVGAFGFLHLAPEMPSEFAEEA-PGNVGLWDQALAIRWL 218 (585)
T ss_dssp SEEEEEEECCSTTTCCCTTCGGGCCHHHHHHHTCEEEEECCCCTHHHHCCCGGGSCGGGTTSS-CSCHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCcccCCCCCCCCCCchhhhccCCEEEEEecccccchhhcccccccccccCCCC-CCcccHHHHHHHHHHH
Confidence 358999999964 333333333455653 48999999999 66644210 0001 1123345555444444
Q ss_pred HHHh---CCC-CceEEEEecccchHH-HHHHHHh--CcCccceeEEEcCC
Q 022534 101 LDVL---EVK-YPFFLVVQGFLVGSY-GLTWALK--NPSRISKLAILNSP 143 (295)
Q Consensus 101 ~~~l---~~~-~~~~lv~~G~~~G~~-~~~~a~~--~p~~v~~lil~~~p 143 (295)
.+.+ +.+ ..+.++ |+|.|+. +..+++. ....+++.|+.+..
T Consensus 219 ~~ni~~fggDp~~vti~--G~SaGg~~v~~~~~~~~~~~lf~~ai~~Sg~ 266 (585)
T 1dx4_A 219 KDNAHAFGGNPEWMTLF--GESAGSSSVNAQLMSPVTRGLVKRGMMQSGT 266 (585)
T ss_dssp HHSTGGGTEEEEEEEEE--EETHHHHHHHHHHHCTTTTTSCCEEEEESCC
T ss_pred HHHHHHhCCCcceeEEe--ecchHHHHHHHHHhCCcccchhHhhhhhccc
Confidence 3332 322 235555 6666643 3333322 23578888887643
|
| >1ac5_A KEX1(delta)P; carboxypeptidase, hydrolase, glycoprotein, transmembrane; HET: NAG; 2.40A {Saccharomyces cerevisiae} SCOP: c.69.1.5 | Back alignment and structure |
|---|
Probab=96.67 E-value=0.02 Score=52.10 Aligned_cols=61 Identities=10% Similarity=-0.049 Sum_probs=49.6
Q ss_pred CCcEEEEEeCCCCCCCcchHHHHHhcCC------------------------------------CCeEEEEecCCCCCCC
Q 022534 233 DKPVLVAWGISDKYLPQSVAEEFQKGNP------------------------------------NVVKLQMIEGAGHMPQ 276 (295)
Q Consensus 233 ~~P~l~i~G~~D~~~~~~~~~~~~~~~~------------------------------------~~~~~~~i~~~gH~~~ 276 (295)
.+++|+..|+.|-+++....+.+.+.+. .+.+++.+.+|||+++
T Consensus 372 girVLIYsGD~D~icn~~Gt~~~i~~L~W~g~~~f~~~~~~~~W~~~~~~~~~~~~vaG~vk~~~nLTFvtV~gAGHmVP 451 (483)
T 1ac5_A 372 GIEIVLFNGDKDLICNNKGVLDTIDNLKWGGIKGFSDDAVSFDWIHKSKSTDDSEEFSGYVKYDRNLTFVSVYNASHMVP 451 (483)
T ss_dssp TCEEEEEEETTCSTTCHHHHHHHHHHCEETTEESSCTTCEEEEEEECSSTTCCCCSCCEEEEEETTEEEEEETTCCSSHH
T ss_pred CceEEEEECCcCcccCcHHHHHHHHhcCcccccccccCCCceeeEECCccccCccccceEEEEecCeEEEEECCccccCc
Confidence 5899999999999998776655322211 1257889999999999
Q ss_pred CCChHHHHHHHHHHHHh
Q 022534 277 EDWPEKVVDGLRYFFLN 293 (295)
Q Consensus 277 ~e~p~~~~~~i~~fl~~ 293 (295)
.++|+...+.|..||.+
T Consensus 452 ~dqP~~al~m~~~fl~~ 468 (483)
T 1ac5_A 452 FDKSLVSRGIVDIYSND 468 (483)
T ss_dssp HHCHHHHHHHHHHHTTC
T ss_pred chhHHHHHHHHHHHHCC
Confidence 99999999999999975
|
| >3bix_A Neuroligin-1, neuroligin I; esterase domain, alpha-beta hydrolase, cell adhesion, cell J glycoprotein, membrane, postsynaptic cell membrane; HET: NAG; 1.80A {Rattus norvegicus} PDB: 3biw_A* 3b3q_A* 3be8_A* 2wqz_A* 2xb6_A* 2vh8_A 3bl8_A* | Back alignment and structure |
|---|
Probab=96.09 E-value=0.011 Score=55.04 Aligned_cols=102 Identities=11% Similarity=0.118 Sum_probs=57.3
Q ss_pred CCceEEEEcCCC---CCCccchhhHHHhhhC-CCeEEEeCCC----CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH--
Q 022534 34 RLGTIVFLHGAP---SHSYSYRNVMSQMSDA-GFHCFAPDWL----GFGFSDKPEKGYDDFDFTENEFHEELDKLLDV-- 103 (295)
Q Consensus 34 ~~~~vv~lHG~~---~~~~~w~~~~~~l~~~-~~~via~Dl~----G~G~S~~~~~~~~~~~~~~~~~~~~l~~~~~~-- 103 (295)
+.|+||++||.+ ++...|.. ..|++. ++-|+++|.| ||..+..... ...+.+.|....+.-+.+.
T Consensus 130 ~~Pv~v~iHGGg~~~g~~~~~~~--~~la~~~~~vvv~~~YRl~~~Gfl~~~~~~~---~~n~gl~D~~~al~wv~~ni~ 204 (574)
T 3bix_A 130 PKPVMVYIHGGSYMEGTGNLYDG--SVLASYGNVIVITVNYRLGVLGFLSTGDQAA---KGNYGLLDLIQALRWTSENIG 204 (574)
T ss_dssp CEEEEEECCCSSSSSCCGGGSCC--HHHHHHHTCEEEEECCCCHHHHHCCCSSSSC---CCCHHHHHHHHHHHHHHHHGG
T ss_pred CCcEEEEECCCcccCCCCCccCc--hhhhccCCEEEEEeCCcCcccccCcCCCCCC---CCcccHHHHHHHHHHHHHHHH
Confidence 358999999965 33333432 345543 6999999999 5555442211 1233456666666555554
Q ss_pred -hCCC-CceEEEEecccchH-HHHHHHHhCc---CccceeEEEcC
Q 022534 104 -LEVK-YPFFLVVQGFLVGS-YGLTWALKNP---SRISKLAILNS 142 (295)
Q Consensus 104 -l~~~-~~~~lv~~G~~~G~-~~~~~a~~~p---~~v~~lil~~~ 142 (295)
+|.+ ..+.+. |.|.|+ .+..+++... ..+.+.|+.++
T Consensus 205 ~fggdp~~vti~--G~SaGg~~~~~~~~~~~~~~glf~~aI~~Sg 247 (574)
T 3bix_A 205 FFGGDPLRITVF--GSGAGGSCVNLLTLSHYSEKGLFQRAIAQSG 247 (574)
T ss_dssp GGTEEEEEEEEE--EETHHHHHHHHHHTCTTSCTTSCCEEEEESC
T ss_pred HhCCCchhEEEE--eecccHHHHHHHhhCCCcchhHHHHHHHhcC
Confidence 3333 235555 666654 4444444332 45777777754
|
| >4g4g_A 4-O-methyl-glucuronoyl methylesterase; alpha/beta hydrolase, 3-layer alpha/beta/alpha sandwich, ROS fold, glucuronoyl esterase; 1.55A {Myceliophthora thermophila} PDB: 4g4i_A 4g4j_A* | Back alignment and structure |
|---|
Probab=96.00 E-value=0.33 Score=42.94 Aligned_cols=60 Identities=17% Similarity=0.243 Sum_probs=40.9
Q ss_pred CCcEEEEEeCCCCCCCcchHH-------HHHhcC--CCCeEEEEecCCCCC-CCCCChHHHHHHHHHHHHh
Q 022534 233 DKPVLVAWGISDKYLPQSVAE-------EFQKGN--PNVVKLQMIEGAGHM-PQEDWPEKVVDGLRYFFLN 293 (295)
Q Consensus 233 ~~P~l~i~G~~D~~~~~~~~~-------~~~~~~--~~~~~~~~i~~~gH~-~~~e~p~~~~~~i~~fl~~ 293 (295)
.-|+|++.| +|..++++... ..++.. ++...+.+.++-+|+ ...++.+++.+.+.+||.+
T Consensus 312 PRPlLv~~g-~D~w~~p~g~~~a~~aa~~VY~~lGa~d~l~~~~~ggH~Hc~fp~~~r~~~~~F~~k~Lkg 381 (433)
T 4g4g_A 312 PRGLAVFEN-NIDWLGPVSTTGCMAAGRLIYKAYGVPNNMGFSLVGGHNHCQFPSSQNQDLNSYINYFLLG 381 (433)
T ss_dssp TSEEEEEEC-CCTTTCHHHHHHHHHHHHHHHHHHTCGGGEEEEECCSSCTTCCCGGGHHHHHHHHHHHTTC
T ss_pred CceEEEecC-CCCcCCcHHHHHHHHHHHHHHHHcCCccceEEEeeCCCCcccCCHHHHHHHHHHHHHHhCC
Confidence 479999999 88777765432 223333 344667666667786 4667778888888888864
|
| >1ac5_A KEX1(delta)P; carboxypeptidase, hydrolase, glycoprotein, transmembrane; HET: NAG; 2.40A {Saccharomyces cerevisiae} SCOP: c.69.1.5 | Back alignment and structure |
|---|
Probab=95.96 E-value=0.0064 Score=55.41 Aligned_cols=103 Identities=19% Similarity=0.247 Sum_probs=60.1
Q ss_pred cEEEEEEEcCC----CCCCCceEEEEcCCCCCCccchhhHH-----------------HhhhCCCeEEEeCC-CCCCCCC
Q 022534 20 EYRWFVRETGS----ADSRLGTIVFLHGAPSHSYSYRNVMS-----------------QMSDAGFHCFAPDW-LGFGFSD 77 (295)
Q Consensus 20 ~~~~~~~~~g~----~~~~~~~vv~lHG~~~~~~~w~~~~~-----------------~l~~~~~~via~Dl-~G~G~S~ 77 (295)
+..+||..+.. ....+|.+|++||+|+++..|-.+.+ -|.+ ...++.+|+ .|-|.|-
T Consensus 48 ~~~lfy~~~~~~~~~~~~~~Pl~lwlnGGPG~SS~~g~~~e~GP~~~~~~~~l~~n~~sw~~-~~n~lfiDqPvGtGfSy 126 (483)
T 1ac5_A 48 DLEYFFWKFTNNDSNGNVDRPLIIWLNGGPGCSSMDGALVESGPFRVNSDGKLYLNEGSWIS-KGDLLFIDQPTGTGFSV 126 (483)
T ss_dssp CCEEEEEEEECSCSGGGSSCCEEEEECCTTTBCTHHHHHHSSSSEEECTTSCEEECTTCGGG-TSEEEEECCSTTSTTCS
T ss_pred CceEEEEEEEecCCCCCcCCCEEEEECCCCchHhhhhhHhhcCCeEecCCCceeecccchhh-cCCeEEEecCCCccccC
Confidence 44566544321 12346899999999998887743321 1333 478999998 6999996
Q ss_pred CCCCCC-----CCCCCCHHHHHHHHHHHHHHh-----C-CCCceEEEEecccc-hHHHHH
Q 022534 78 KPEKGY-----DDFDFTENEFHEELDKLLDVL-----E-VKYPFFLVVQGFLV-GSYGLT 125 (295)
Q Consensus 78 ~~~~~~-----~~~~~~~~~~~~~l~~~~~~l-----~-~~~~~~lv~~G~~~-G~~~~~ 125 (295)
...... ..+.-+.+..++++..+++.. . .+.+++|. |.|- |.++-.
T Consensus 127 ~~~~~~~~~~~~~~~~~~~~~a~~~~~fl~~~~~~fP~~~~~~~~i~--GeSYgg~y~p~ 184 (483)
T 1ac5_A 127 EQNKDEGKIDKNKFDEDLEDVTKHFMDFLENYFKIFPEDLTRKIILS--GESYAGQYIPF 184 (483)
T ss_dssp SCCSSGGGSCTTSSCCSHHHHHHHHHHHHHHHHHHCTTGGGSEEEEE--EEETHHHHHHH
T ss_pred CcCcccccccccccCCCHHHHHHHHHHHHHHHHHhChhhcCCCEEEE--eccccccccHH
Confidence 532110 012224556777777666653 1 24567777 4554 445433
|
| >2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A* | Back alignment and structure |
|---|
Probab=95.89 E-value=0.0013 Score=71.07 Aligned_cols=92 Identities=10% Similarity=0.212 Sum_probs=0.0
Q ss_pred CceEEEEcCCCCCCccchhhHHHhhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCceEEEE
Q 022534 35 LGTIVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEELDKLLDVLEVKYPFFLVV 114 (295)
Q Consensus 35 ~~~vv~lHG~~~~~~~w~~~~~~l~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~~lv~ 114 (295)
+++++|+|+.+++...|..+...|. ..|+.+..|| ..+. .++++++++..+.+..+.-+.|+.++
T Consensus 2242 ~~~Lfc~~~agG~~~~y~~l~~~l~---~~v~~lq~pg----~~~~-------~~i~~la~~~~~~i~~~~p~gpy~L~- 2306 (2512)
T 2vz8_A 2242 ERPLFLVHPIEGSITVFHGLAAKLS---IPTYGLQCTG----AAPL-------DSIQSLASYYIECIRQVQPEGPYRIA- 2306 (2512)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CCCeEEeCCccccHHHHHHHHHhhC---CcEEEEecCC----CCCC-------CCHHHHHHHHHHHHHHhCCCCCEEEE-
Confidence 4689999999999999988888774 6888888887 1111 14556666666666655434577776
Q ss_pred ecccchH-HHHHHHHh---CcCccc---eeEEEcC
Q 022534 115 QGFLVGS-YGLTWALK---NPSRIS---KLAILNS 142 (295)
Q Consensus 115 ~G~~~G~-~~~~~a~~---~p~~v~---~lil~~~ 142 (295)
|||+|+ ++..+|.+ .-..+. .++++++
T Consensus 2307 -G~S~Gg~lA~evA~~L~~~G~~v~~~~~L~llDg 2340 (2512)
T 2vz8_A 2307 -GYSYGACVAFEMCSQLQAQQSATPGNHSLFLFDG 2340 (2512)
T ss_dssp -----------------------------------
T ss_pred -EECHhHHHHHHHHHHHHHcCCCCCccceEEEEeC
Confidence 787764 56555542 222343 5666654
|
| >1llf_A Lipase 3; candida cylindracea cholesterol esterase, sterol ester acylh hydrolase; HET: NAG F23; 1.40A {Candida cylindracea} SCOP: c.69.1.17 PDB: 1cle_A* 1lpm_A* 1lpn_A* 1lpo_A* 1lpp_A* 1lps_A* 1crl_A* 1trh_A* 3rar_A* 1gz7_A* | Back alignment and structure |
|---|
Probab=95.52 E-value=0.02 Score=52.93 Aligned_cols=106 Identities=10% Similarity=0.055 Sum_probs=54.3
Q ss_pred CCceEEEEcCCC---CCCccch--hhHHH-hh-hCCCeEEEeCCCC----CCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
Q 022534 34 RLGTIVFLHGAP---SHSYSYR--NVMSQ-MS-DAGFHCFAPDWLG----FGFSDKPEKGYDDFDFTENEFHEELDKLLD 102 (295)
Q Consensus 34 ~~~~vv~lHG~~---~~~~~w~--~~~~~-l~-~~~~~via~Dl~G----~G~S~~~~~~~~~~~~~~~~~~~~l~~~~~ 102 (295)
+.|+||++||++ ++...|. .++.. ++ ..++-|+++|.|. |..+....... ...+.+.|....+.-+.+
T Consensus 113 ~~Pv~v~iHGGg~~~g~~~~~~~~~l~~~~~~~~~~~vvv~~nYRl~~~gf~~~~~~~~~~-~~n~gl~D~~~Al~wv~~ 191 (534)
T 1llf_A 113 NLPVMLWIFGGGFEIGSPTIFPPAQMVTKSVLMGKPIIHVAVNYRVASWGFLAGDDIKAEG-SGNAGLKDQRLGMQWVAD 191 (534)
T ss_dssp CEEEEEEECCSTTTSCCGGGSCCHHHHHHHHHTTCCCEEEEECCCCHHHHHCCSHHHHHHT-CTTHHHHHHHHHHHHHHH
T ss_pred CceEEEEEeCCCcccCCCcccCchHHHHHHHhcCCCEEEEEeCCCCCCCCCCCcccccccC-CCchhHHHHHHHHHHHHH
Confidence 458999999975 2333332 23322 22 2479999999993 32221000000 112244556555555544
Q ss_pred Hh---CCC-CceEEEEecccchH-HHHHHHHhC--------cCccceeEEEcC
Q 022534 103 VL---EVK-YPFFLVVQGFLVGS-YGLTWALKN--------PSRISKLAILNS 142 (295)
Q Consensus 103 ~l---~~~-~~~~lv~~G~~~G~-~~~~~a~~~--------p~~v~~lil~~~ 142 (295)
.+ +.+ +.+.++ |+|.|+ .+....+.. +..+++.|+.++
T Consensus 192 ni~~fggDp~~Vti~--G~SaGg~~~~~~l~~~~~~~~~~~~~lf~~ai~~Sg 242 (534)
T 1llf_A 192 NIAGFGGDPSKVTIF--GESAGSMSVLCHLIWNDGDNTYKGKPLFRAGIMQSG 242 (534)
T ss_dssp HGGGGTEEEEEEEEE--EETHHHHHHHHHHHGGGGCCEETTEESCSEEEEESC
T ss_pred HHHHhCCCcccEEEE--EECHhHHHHHHHHcCCCccccccccchhHhHhhhcc
Confidence 43 332 235555 666654 333322222 557888888754
|
| >1ivy_A Human protective protein; carboxypeptidase, serine carboxypeptidase, protective protei glycoprotein, zymogen; HET: NAG NDG; 2.20A {Homo sapiens} SCOP: c.69.1.5 | Back alignment and structure |
|---|
Probab=95.38 E-value=0.021 Score=51.56 Aligned_cols=125 Identities=23% Similarity=0.280 Sum_probs=74.2
Q ss_pred ceeeEEeC-cEEEEEEEcCCC--CCCCceEEEEcCCCCCCccchhhHHH------------------hhhCCCeEEEeCC
Q 022534 12 YGSYIKSG-EYRWFVRETGSA--DSRLGTIVFLHGAPSHSYSYRNVMSQ------------------MSDAGFHCFAPDW 70 (295)
Q Consensus 12 ~~~~~~~~-~~~~~~~~~g~~--~~~~~~vv~lHG~~~~~~~w~~~~~~------------------l~~~~~~via~Dl 70 (295)
+.-+++++ +..+||...... ...+|.+|++||+|+++..|..+.+. |.+ .+.++.+|+
T Consensus 22 ~sGyv~v~~~~~lfy~f~~s~~~~~~~Pl~lwlnGGPG~Ss~~g~~~e~GP~~~~~~~~~l~~n~~sw~~-~~~~lfiDq 100 (452)
T 1ivy_A 22 YSGYLKSSGSKHLHYWFVESQKDPENSPVVLWLNGGPGCSSLDGLLTEHGPFLVQPDGVTLEYNPYSWNL-IANVLYLES 100 (452)
T ss_dssp EEEEEECSTTEEEEEEEECCSSCGGGSCEEEEECCTTTBCTHHHHHTTTSSEEECTTSSCEEECTTCGGG-SSEEEEECC
T ss_pred eEEEEeeCCCCeEEEEEEEcCCCCCCCCEEEEECCCCcHHHHHHHHHhcCCcEEeCCCceeeeCCCcccc-cccEEEEec
Confidence 44466665 577777665432 12368999999999988776443221 223 589999998
Q ss_pred -CCCCCCCCCCCCCCCCCCCHHHHH----HHHHHHHHHh-C-CCCceEEEEecccc-hHHHHHHHH----hCcCccceeE
Q 022534 71 -LGFGFSDKPEKGYDDFDFTENEFH----EELDKLLDVL-E-VKYPFFLVVQGFLV-GSYGLTWAL----KNPSRISKLA 138 (295)
Q Consensus 71 -~G~G~S~~~~~~~~~~~~~~~~~~----~~l~~~~~~l-~-~~~~~~lv~~G~~~-G~~~~~~a~----~~p~~v~~li 138 (295)
+|-|.|-.....+ ..+.+..+ ..+..|++.. . .+++++|. |+|- |.++-.+|. ..+-++++++
T Consensus 101 P~GtGfS~~~~~~~---~~~~~~~a~~~~~~l~~f~~~~p~~~~~~~~i~--GeSYgG~y~p~la~~i~~~~~~~l~g~~ 175 (452)
T 1ivy_A 101 PAGVGFSYSDDKFY---ATNDTEVAQSNFEALQDFFRLFPEYKNNKLFLT--GESYAGIYIPTLAVLVMQDPSMNLQGLA 175 (452)
T ss_dssp STTSTTCEESSCCC---CCBHHHHHHHHHHHHHHHHHHSGGGTTSCEEEE--EETTHHHHHHHHHHHHTTCTTSCEEEEE
T ss_pred CCCCCcCCcCCCCC---cCCcHHHHHHHHHHHHHHHHhcHHhcCCCEEEE--eeccceeehHHHHHHHHhcCccccceEE
Confidence 6999997432222 11223334 4455555543 1 23568887 4554 444443332 3456889998
Q ss_pred EEcC
Q 022534 139 ILNS 142 (295)
Q Consensus 139 l~~~ 142 (295)
+.++
T Consensus 176 ign~ 179 (452)
T 1ivy_A 176 VGNG 179 (452)
T ss_dssp EESC
T ss_pred ecCC
Confidence 8753
|
| >2bce_A Cholesterol esterase; hydrolase, serine esterase, lipase; 1.60A {Bos taurus} SCOP: c.69.1.1 PDB: 1akn_A* 1aql_A* 1f6w_A 1jmy_A | Back alignment and structure |
|---|
Probab=95.10 E-value=0.088 Score=49.08 Aligned_cols=104 Identities=13% Similarity=0.095 Sum_probs=55.3
Q ss_pred CCceEEEEcCCC---CCCcc------chhhHHHhhh-CCCeEEEeCCC----CCCCCCCCCCCCCCCCCCHHHHHHHHHH
Q 022534 34 RLGTIVFLHGAP---SHSYS------YRNVMSQMSD-AGFHCFAPDWL----GFGFSDKPEKGYDDFDFTENEFHEELDK 99 (295)
Q Consensus 34 ~~~~vv~lHG~~---~~~~~------w~~~~~~l~~-~~~~via~Dl~----G~G~S~~~~~~~~~~~~~~~~~~~~l~~ 99 (295)
+.|+||++||++ ++... +......|+. .++-|+.++.| ||+.+.... . ..++.+.|+...+.-
T Consensus 97 ~~PV~v~iHGGg~~~Gs~~~~~~~~~~~~~~~~la~~~~vvvV~~nYRLg~~Gfl~~~~~~--~-pgn~gl~D~~~Al~w 173 (579)
T 2bce_A 97 DLPVMIWIYGGAFLMGASQGANFLSNYLYDGEEIATRGNVIVVTFNYRVGPLGFLSTGDSN--L-PGNYGLWDQHMAIAW 173 (579)
T ss_dssp SEEEEEECCCCSEEEC-------CTTGGGCCHHHHHHHTCEEEEECCCCHHHHHCCCSSTT--C-CCCHHHHHHHHHHHH
T ss_pred CCeEEEEECCCcccCCCCCccccccccccChHHHhcCCCEEEEEeCCccccccCCcCCCCC--C-CCccchHHHHHHHHH
Confidence 458999999975 22211 1111234443 36999999999 676554221 1 112335566555554
Q ss_pred HHHHh---CCC-CceEEEEecccchH-HHHHHHH--hCcCccceeEEEcC
Q 022534 100 LLDVL---EVK-YPFFLVVQGFLVGS-YGLTWAL--KNPSRISKLAILNS 142 (295)
Q Consensus 100 ~~~~l---~~~-~~~~lv~~G~~~G~-~~~~~a~--~~p~~v~~lil~~~ 142 (295)
+.+.+ +.+ ..+.++ |+|.|+ .+..++. .....+++.|+.+.
T Consensus 174 v~~ni~~fGgDp~~Vti~--G~SAGg~~~~~~~~~~~~~~lf~~ai~~Sg 221 (579)
T 2bce_A 174 VKRNIEAFGGDPDQITLF--GESAGGASVSLQTLSPYNKGLIKRAISQSG 221 (579)
T ss_dssp HHHHGGGGTEEEEEEEEE--EETHHHHHHHHHHHCGGGTTTCSEEEEESC
T ss_pred HHHHHHHhCCCcccEEEe--cccccchheeccccCcchhhHHHHHHHhcC
Confidence 44433 333 235555 666654 3333333 23457888887754
|
| >1thg_A Lipase; hydrolase(carboxylic esterase); HET: NAG NDG; 1.80A {Galactomyces geotrichum} SCOP: c.69.1.17 | Back alignment and structure |
|---|
Probab=94.90 E-value=0.04 Score=50.99 Aligned_cols=106 Identities=10% Similarity=0.088 Sum_probs=54.6
Q ss_pred CCceEEEEcCCC---CCCccch--hhHHH-hhh-CCCeEEEeCCCC----CCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
Q 022534 34 RLGTIVFLHGAP---SHSYSYR--NVMSQ-MSD-AGFHCFAPDWLG----FGFSDKPEKGYDDFDFTENEFHEELDKLLD 102 (295)
Q Consensus 34 ~~~~vv~lHG~~---~~~~~w~--~~~~~-l~~-~~~~via~Dl~G----~G~S~~~~~~~~~~~~~~~~~~~~l~~~~~ 102 (295)
+.|+||++||++ ++...|. .++.. ++. .++-|+.+|.|. |..+....... ...+.+.|....+.-+.+
T Consensus 121 ~~Pviv~iHGGg~~~g~~~~~~~~~l~~~~l~~~~~~vvv~~nYRl~~~gf~~~~~~~~~~-~~n~gl~D~~~Al~wv~~ 199 (544)
T 1thg_A 121 KLPVMVWIYGGAFVYGSSAAYPGNSYVKESINMGQPVVFVSINYRTGPFGFLGGDAITAEG-NTNAGLHDQRKGLEWVSD 199 (544)
T ss_dssp CEEEEEEECCCTTCCSGGGGCCSHHHHHHHHHTTCCCEEEEECCCCHHHHHCCSHHHHHHT-CTTHHHHHHHHHHHHHHH
T ss_pred CCcEEEEECCCccccCCccccCchHHHHHHhhcCCCEEEEeCCCCCCcccCCCcccccccC-CCchhHHHHHHHHHHHHH
Confidence 458999999975 2333332 23322 332 379999999994 33221100000 112234566555554444
Q ss_pred Hh---CCC-CceEEEEecccchH-HHHHHHHhC--------cCccceeEEEcC
Q 022534 103 VL---EVK-YPFFLVVQGFLVGS-YGLTWALKN--------PSRISKLAILNS 142 (295)
Q Consensus 103 ~l---~~~-~~~~lv~~G~~~G~-~~~~~a~~~--------p~~v~~lil~~~ 142 (295)
.+ +.+ ..+.|+ |+|.|+ .+..+++.. +..++++|+.++
T Consensus 200 ni~~fggDp~~Vti~--G~SaGg~~~~~~~~~~~~~~~~~~~~lf~~~i~~Sg 250 (544)
T 1thg_A 200 NIANFGGDPDKVMIF--GESAGAMSVAHQLIAYGGDNTYNGKKLFHSAILQSG 250 (544)
T ss_dssp HGGGGTEEEEEEEEE--EETHHHHHHHHHHHGGGTCCEETTEESCSEEEEESC
T ss_pred HHHHhCCChhHeEEE--EECHHHHHHHHHHhCCCccccccccccccceEEecc
Confidence 43 332 235555 666654 333333331 457888888864
|
| >4az3_A Lysosomal protective protein 32 kDa chain; hydrolase, drug discovery, carboxypeptidase, cardiovascular; HET: NAG S35; 2.04A {Homo sapiens} PDB: 4az0_A* | Back alignment and structure |
|---|
Probab=94.57 E-value=0.79 Score=38.72 Aligned_cols=122 Identities=23% Similarity=0.275 Sum_probs=69.7
Q ss_pred eEEe-CcEEEEEEEcCC--CCCCCceEEEEcCCCCCCccchhhHHH------------------hhhCCCeEEEeCCC-C
Q 022534 15 YIKS-GEYRWFVRETGS--ADSRLGTIVFLHGAPSHSYSYRNVMSQ------------------MSDAGFHCFAPDWL-G 72 (295)
Q Consensus 15 ~~~~-~~~~~~~~~~g~--~~~~~~~vv~lHG~~~~~~~w~~~~~~------------------l~~~~~~via~Dl~-G 72 (295)
++++ ++..+||..... ....+|.+|++-|+++.+..|-.+.+. |.+ ...++.+|+| |
T Consensus 27 yv~v~~~~~lFywf~es~~~p~~~Pl~lWlnGGPGcSS~~g~~~E~GP~~~~~~~~~l~~N~~sW~~-~an~lfiD~PvG 105 (300)
T 4az3_A 27 YLKGSGSKHLHYWFVESQKDPENSPVVLWLNGGPGCSSLDGLLTEHGPFLVQPDGVTLEYNPYSWNL-IANVLYLESPAG 105 (300)
T ss_dssp EEECSTTEEEEEEEECCSSCTTTSCEEEEECCTTTBCTHHHHHHTTSSEEECTTSSCEEECTTCGGG-SSEEEEECCSTT
T ss_pred eeecCCCCeEEEEEEEcCCCCCCCCEEEEECCCCcHHHHHHHHhcCCCceecCCCccccccCccHHh-hhcchhhcCCCc
Confidence 4555 467777765532 223368999999999988876544321 112 3689999988 8
Q ss_pred CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH----h-C-CCCceEEEEecccchHHHHHHHH---hCcC-ccceeEEEc
Q 022534 73 FGFSDKPEKGYDDFDFTENEFHEELDKLLDV----L-E-VKYPFFLVVQGFLVGSYGLTWAL---KNPS-RISKLAILN 141 (295)
Q Consensus 73 ~G~S~~~~~~~~~~~~~~~~~~~~l~~~~~~----l-~-~~~~~~lv~~G~~~G~~~~~~a~---~~p~-~v~~lil~~ 141 (295)
-|.|-.....+ .-+..+.++|+..++.. . . .+++++|.|-++ +|.++-.+|. +.+. .++++++-+
T Consensus 106 tGfSy~~~~~~---~~~~~~~a~d~~~fl~~f~~~fp~~~~~~~yi~GESY-~G~yvP~~a~~i~~~~~inLkG~~iGN 180 (300)
T 4az3_A 106 VGFSYSDDKFY---ATNDTEVAQSNFEALQDFFRLFPEYKNNKLFLTGESY-AGIYIPTLAVLVMQDPSMNLQGLAVGN 180 (300)
T ss_dssp STTCEETTCCC---CCBHHHHHHHHHHHHHHHHHHCGGGTTSCEEEEEETT-HHHHHHHHHHHHTTCTTSCEEEEEEES
T ss_pred ccccccCCCcc---cccchhhHHHHHHHHHHHHHhChhhcCCceEEEecCC-ceeeHHHHHHHHHhCCCcccccceecC
Confidence 88886433221 12345556666666553 2 1 245677763322 4555433332 3332 577776544
|
| >1tib_A Lipase; hydrolase(carboxylic esterase); 1.84A {Thermomyces lanuginosus} SCOP: c.69.1.17 PDB: 1dt3_A 1dt5_A 1du4_A 1ein_A* 1dte_A 4dyh_A* 4ea6_A 1gt6_A* | Back alignment and structure |
|---|
Probab=93.86 E-value=0.11 Score=43.29 Aligned_cols=95 Identities=12% Similarity=0.124 Sum_probs=51.3
Q ss_pred CceEEEEcCCCCCCccchhhHHHhhhCCCeEEE-eCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhC---CCCce
Q 022534 35 LGTIVFLHGAPSHSYSYRNVMSQMSDAGFHCFA-PDWLGFGFSDKPEKGYDDFDFTENEFHEELDKLLDVLE---VKYPF 110 (295)
Q Consensus 35 ~~~vv~lHG~~~~~~~w~~~~~~l~~~~~~via-~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~l~~~~~~l~---~~~~~ 110 (295)
+..||.+||-.. +.+.+.+.++.++. .|++|.++-. . ++.-..+.+.+++.++++.+. -+.++
T Consensus 74 ~~iVva~RGT~~-------~~d~l~d~~~~~~~~~~~~~~~~vh--~----Gf~~~~~~~~~~~~~~~~~~~~~~~~~~i 140 (269)
T 1tib_A 74 KLIVLSFRGSRS-------IENWIGNLNFDLKEINDICSGCRGH--D----GFTSSWRSVADTLRQKVEDAVREHPDYRV 140 (269)
T ss_dssp TEEEEEECCCSC-------THHHHTCCCCCEEECTTTSTTCEEE--H----HHHHHHHHHHHHHHHHHHHHHHHCTTSEE
T ss_pred CEEEEEEeCCCC-------HHHHHHhcCeeeeecCCCCCCCEec--H----HHHHHHHHHHHHHHHHHHHHHHHCCCceE
Confidence 458888999852 34455556777776 6776521111 0 111112345556666666542 23356
Q ss_pred EEEEecccch-HHHHHHHHhCcC---ccceeEEEcCCCC
Q 022534 111 FLVVQGFLVG-SYGLTWALKNPS---RISKLAILNSPLT 145 (295)
Q Consensus 111 ~lv~~G~~~G-~~~~~~a~~~p~---~v~~lil~~~p~~ 145 (295)
++. |||+| ++|..+|+.... .+. ++.+++|..
T Consensus 141 ~l~--GHSLGGalA~l~a~~l~~~~~~~~-~~tfg~P~v 176 (269)
T 1tib_A 141 VFT--GHSLGGALATVAGADLRGNGYDID-VFSYGAPRV 176 (269)
T ss_dssp EEE--EETHHHHHHHHHHHHHTTSSSCEE-EEEESCCCC
T ss_pred EEe--cCChHHHHHHHHHHHHHhcCCCeE-EEEeCCCCC
Confidence 565 77765 577776665332 344 555666654
|
| >2gzs_A IROE protein; enterobactin, salmochelin, DFP, hydrolase, catalytic DYAD; HET: DFP; 1.40A {Escherichia coli} SCOP: c.69.1.38 PDB: 2gzr_A* | Back alignment and structure |
|---|
Probab=93.38 E-value=0.038 Score=46.30 Aligned_cols=57 Identities=12% Similarity=-0.039 Sum_probs=33.1
Q ss_pred CCcEEEEEeCCCCCCC--------cchHHHHHhc---CCCCeEEEEecCCCCCCCCCChHHHHHHHHHHHH
Q 022534 233 DKPVLVAWGISDKYLP--------QSVAEEFQKG---NPNVVKLQMIEGAGHMPQEDWPEKVVDGLRYFFL 292 (295)
Q Consensus 233 ~~P~l~i~G~~D~~~~--------~~~~~~~~~~---~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~ 292 (295)
..|+++.+|+.|...+ ...++++.+. ....+++.++|+.+|... .++.+.+.++ ||.
T Consensus 196 ~~~i~l~~G~~d~~~~~~~~~~~~~~~~~~~~~~L~~~g~~~~~~~~~g~~H~~~--~~~~~~~~l~-fl~ 263 (278)
T 2gzs_A 196 TKHLAIMEGSATQGDNRETHAVGVLSKIHTTLTILKDKGVNAVFWDFPNLGHGPM--FNASFRQALL-DIS 263 (278)
T ss_dssp TCEEEEEECCC-----------CHHHHHHHHHHHHHHTTCCEEEEECTTCCHHHH--HHHHHHHHHH-HHT
T ss_pred CCcEEEEecCccccccccchhhhhHHHHHHHHHHHHcCCCeeEEEEcCCCCccch--hHHHHHHHHH-HHh
Confidence 3589999999997532 3344444322 233479999999999732 3345556665 553
|
| >1tia_A Lipase; hydrolase(carboxylic esterase); 2.10A {Penicillium camemberti} SCOP: c.69.1.17 | Back alignment and structure |
|---|
Probab=92.57 E-value=0.57 Score=39.16 Aligned_cols=95 Identities=19% Similarity=0.175 Sum_probs=45.6
Q ss_pred CceEEEEcCCCCCCccchhhHHHhhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhC---CCCceE
Q 022534 35 LGTIVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEELDKLLDVLE---VKYPFF 111 (295)
Q Consensus 35 ~~~vv~lHG~~~~~~~w~~~~~~l~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~l~~~~~~l~---~~~~~~ 111 (295)
+..||.+||-.. + .+.+.+.++.+..+|+...|+..+ ++.-....+.+++.+.++.+. -+.+++
T Consensus 74 ~~iVvafRGT~~----~---~d~~~d~~~~~~~~~~~~~~~vh~------Gf~~~~~~~~~~~~~~l~~~~~~~p~~~i~ 140 (279)
T 1tia_A 74 SAVVLAFRGSYS----V---RNWVADATFVHTNPGLCDGCLAEL------GFWSSWKLVRDDIIKELKEVVAQNPNYELV 140 (279)
T ss_pred CEEEEEEeCcCC----H---HHHHHhCCcEeecCCCCCCCccCh------hHHHHHHHHHHHHHHHHHHHHHHCCCCeEE
Confidence 458889999863 1 223334456666656532222211 111112234445555555431 123455
Q ss_pred EEEecccch-HHHHHHHHhCcC----ccceeEEEcCCCC
Q 022534 112 LVVQGFLVG-SYGLTWALKNPS----RISKLAILNSPLT 145 (295)
Q Consensus 112 lv~~G~~~G-~~~~~~a~~~p~----~v~~lil~~~p~~ 145 (295)
+. |||+| ++|..+|+...+ .+ .++..++|..
T Consensus 141 vt--GHSLGGalA~l~a~~l~~~g~~~v-~~~tfg~Prv 176 (279)
T 1tia_A 141 VV--GHSLGAAVATLAATDLRGKGYPSA-KLYAYASPRV 176 (279)
T ss_pred EE--ecCHHHHHHHHHHHHHHhcCCCce-eEEEeCCCCC
Confidence 55 77664 677666654321 13 3555555543
|
| >1tgl_A Triacyl-glycerol acylhydrolase; carboxylic esterase; 1.90A {Rhizomucor miehei} SCOP: c.69.1.17 PDB: 4tgl_A 5tgl_A* 3tgl_A | Back alignment and structure |
|---|
Probab=86.57 E-value=0.99 Score=37.42 Aligned_cols=79 Identities=16% Similarity=0.116 Sum_probs=36.1
Q ss_pred eEEEEcCCCCCCccchhhHHHhhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCC---CCceEEE
Q 022534 37 TIVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEELDKLLDVLEV---KYPFFLV 113 (295)
Q Consensus 37 ~vv~lHG~~~~~~~w~~~~~~l~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~---~~~~~lv 113 (295)
.+++.|-++.+...|. . +..+...++||+....... ++.-....+.+++.+.++.+.- +.++++.
T Consensus 74 ~ivv~frGT~~~~dw~-------~-d~~~~~~~~p~~~~~~vh~----gf~~~~~~l~~~~~~~l~~~~~~~p~~~i~~~ 141 (269)
T 1tgl_A 74 TIYIVFRGSSSIRNWI-------A-DLTFVPVSYPPVSGTKVHK----GFLDSYGEVQNELVATVLDQFKQYPSYKVAVT 141 (269)
T ss_pred EEEEEECCCCCHHHHH-------h-hCceEeeeCCCCCCCEEcH----HHHHHHHHHHHHHHHHHHHHHHHCCCceEEEE
Confidence 5666554444333332 2 4667777888742111001 1111223344455444444311 2235555
Q ss_pred Eecccch-HHHHHHHHh
Q 022534 114 VQGFLVG-SYGLTWALK 129 (295)
Q Consensus 114 ~~G~~~G-~~~~~~a~~ 129 (295)
|||+| ++|..+|..
T Consensus 142 --GHSLGgalA~l~a~~ 156 (269)
T 1tgl_A 142 --GHSLGGATALLCALD 156 (269)
T ss_pred --eeCHHHHHHHHHHHH
Confidence 77765 566655543
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 295 | ||||
| d3c70a1 | 256 | c.69.1.20 (A:2-257) Hydroxynitrile lyase {Rubber t | 4e-24 | |
| d1xkla_ | 258 | c.69.1.20 (A:) Salicylic acid-binding protein 2 (S | 5e-22 | |
| d1b6ga_ | 310 | c.69.1.8 (A:) Haloalkane dehalogenase {Xanthobacte | 2e-21 | |
| d1va4a_ | 271 | c.69.1.12 (A:) Arylesterase {Pseudomonas fluoresce | 1e-19 | |
| d1q0ra_ | 297 | c.69.1.28 (A:) Aclacinomycin methylesterase RdmC { | 2e-19 | |
| d1bn7a_ | 291 | c.69.1.8 (A:) Haloalkane dehalogenase {Rhodococcus | 3e-19 | |
| d1mj5a_ | 298 | c.69.1.8 (A:) Haloalkane dehalogenase {Sphingomona | 3e-19 | |
| d2rhwa1 | 283 | c.69.1.10 (A:4-286) 2-hydroxy-6-oxo-6-phenylhexa-2 | 4e-19 | |
| d1ehya_ | 293 | c.69.1.11 (A:) Bacterial epoxide hydrolase {Agroba | 9e-19 | |
| d1uk8a_ | 271 | c.69.1.10 (A:) Meta-cleavage product hydrolase Cum | 2e-18 | |
| d1j1ia_ | 268 | c.69.1.10 (A:) Meta cleavage compound hydrolase Ca | 3e-18 | |
| d1mtza_ | 290 | c.69.1.7 (A:) Tricorn interacting factor F1 {Archa | 4e-18 | |
| d1zd3a2 | 322 | c.69.1.11 (A:225-547) Mammalian epoxide hydrolase, | 1e-17 | |
| d1hkha_ | 279 | c.69.1.12 (A:) Gamma-lactamase {Aureobacterium sp. | 2e-17 | |
| d1a8sa_ | 273 | c.69.1.12 (A:) Chloroperoxidase F {Pseudomonas flu | 6e-17 | |
| d1m33a_ | 256 | c.69.1.26 (A:) Biotin biosynthesis protein BioH {E | 7e-17 | |
| d1c4xa_ | 281 | c.69.1.10 (A:) 2-hydroxy-6-oxo-6-phenylhexa-2,4-di | 8e-17 | |
| d1brta_ | 277 | c.69.1.12 (A:) Bromoperoxidase A2 {Streptomyces au | 1e-15 | |
| d1pjaa_ | 268 | c.69.1.13 (A:) Palmitoyl protein thioesterase 2 {H | 6e-15 | |
| d1a88a_ | 275 | c.69.1.12 (A:) Chloroperoxidase L {Streptomyces li | 7e-15 | |
| d1azwa_ | 313 | c.69.1.7 (A:) Proline iminopeptidase {Xanthomonas | 1e-14 | |
| d1a8qa_ | 274 | c.69.1.12 (A:) Bromoperoxidase A1 {Streptomyces au | 2e-14 | |
| d1thta_ | 302 | c.69.1.13 (A:) Myristoyl-ACP-specific thioesterase | 9e-14 | |
| d1r3da_ | 264 | c.69.1.35 (A:) Hypothetical protein VC1974 {Vibrio | 1e-13 | |
| d1qo7a_ | 394 | c.69.1.11 (A:) Bacterial epoxide hydrolase {Asperg | 1e-12 | |
| d1k8qa_ | 377 | c.69.1.6 (A:) Gastric lipase {Dog (Canis familiari | 1e-12 | |
| d1wm1a_ | 313 | c.69.1.7 (A:) Proline aminopeptidase {Serratia mar | 3e-12 | |
| d1cvla_ | 319 | c.69.1.18 (A:) Lipase {Chromobacterium viscosum [T | 3e-11 | |
| d1qlwa_ | 318 | c.69.1.15 (A:) A novel bacterial esterase {Alcalig | 5e-10 | |
| d1tqha_ | 242 | c.69.1.29 (A:) Carboxylesterase Est {Bacillus stea | 8e-08 | |
| d1ispa_ | 179 | c.69.1.18 (A:) Lipase A {Bacillus subtilis [TaxId: | 3e-07 | |
| d1imja_ | 208 | c.69.1.23 (A:) Ccg1/TafII250-interacting factor B | 7e-07 | |
| d1imja_ | 208 | c.69.1.23 (A:) Ccg1/TafII250-interacting factor B | 2e-04 | |
| d1l7aa_ | 318 | c.69.1.25 (A:) Cephalosporin C deacetylase {Bacill | 8e-07 | |
| d1ex9a_ | 285 | c.69.1.18 (A:) Lipase {Pseudomonas aeruginosa [Tax | 3e-05 | |
| d1tcaa_ | 317 | c.69.1.17 (A:) Triacylglycerol lipase {Yeast (Cand | 3e-05 | |
| d1ufoa_ | 238 | c.69.1.27 (A:) Hypothetical protein TT1662 {Thermu | 1e-04 | |
| d1xkta_ | 286 | c.69.1.22 (A:) Fatty acid synthase {Human (Homo sa | 2e-04 | |
| d2dsta1 | 122 | c.69.1.39 (A:2-123) Hypothetical protein TTHA1544 | 0.001 | |
| d1uxoa_ | 186 | c.69.1.31 (A:) Hypothetical protein YdeN {Bacillus | 0.002 | |
| d3b5ea1 | 209 | c.69.1.14 (A:7-215) Uncharacterized protein Mll837 | 0.002 | |
| d1vlqa_ | 322 | c.69.1.25 (A:) Acetyl xylan esterase TM0077 {Therm | 0.003 |
| >d3c70a1 c.69.1.20 (A:2-257) Hydroxynitrile lyase {Rubber tree (Hevea brasiliensis) [TaxId: 3981]} Length = 256 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Hydroxynitrile lyase-like domain: Hydroxynitrile lyase species: Rubber tree (Hevea brasiliensis) [TaxId: 3981]
Score = 96.1 bits (237), Expect = 4e-24
Identities = 32/257 (12%), Positives = 69/257 (26%), Gaps = 6/257 (2%)
Query: 38 IVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEEL 97
V +H ++ + + + G A D G + + FD L
Sbjct: 5 FVLIHTICHGAWIWHKLKPLLEALGHKVTALDLAASGVDPRQIEEIGSFDEYSEPLLTFL 64
Query: 98 DKLLDVLEVKYPFFLVVQGFLVGSYGLTWALKNPSRISKLAILNSPLTASSPLPGLFQQL 157
+ ++V G A K +I+ NS L + P
Sbjct: 65 EA-----LPPGEKVILVGESCGGLNIAIAADKYCEKIAAAVFHNSVLPDTEHCPSYVVDK 119
Query: 158 RIPLLGEFTAQNAIMAERFIEAGSPYVLKLDKADVYRLPYLASSGPGFALLEAARKVNFK 217
+ + ++ + + + L A + + F+
Sbjct: 120 LMEVFPDWKDTTYFTYTKDGKEITGLKLGFTLLRENLYTLCGPEEYELAKMLTRKGSLFQ 179
Query: 218 DISSRIGAGFSSGSWDKPVLVAWGISDKYLPQSVAEEFQKGNPNVVKLQMIEGAGHMPQE 277
+I ++ G + W D+ + K+ +EG H Q
Sbjct: 180 NILAKRPFFTKEGYGSIKKIYVWTDQDEIFLPEFQLWQIENYKP-DKVYKVEGGDHKLQL 238
Query: 278 DWPEKVVDGLRYFFLNY 294
+++ + L+ Y
Sbjct: 239 TKTKEIAEILQEVADTY 255
|
| >d1xkla_ c.69.1.20 (A:) Salicylic acid-binding protein 2 (SABP2) {Common tobacco (Nicotiana tabacum) [TaxId: 4097]} Length = 258 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Hydroxynitrile lyase-like domain: Salicylic acid-binding protein 2 (SABP2) species: Common tobacco (Nicotiana tabacum) [TaxId: 4097]
Score = 90.8 bits (223), Expect = 5e-22
Identities = 37/256 (14%), Positives = 65/256 (25%), Gaps = 8/256 (3%)
Query: 37 TIVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEE 96
V +HGA +S+ + + AG A D G + + E
Sbjct: 4 HFVLVHGACHGGWSWYKLKPLLEAAGHKVTALDLAASGTDLRKIEELRTLYDYTLPLME- 62
Query: 97 LDKLLDVLEVKYPFFLVVQGFLVGSYGLTWALKNPSRISKLAILNSPLTASSPLPGLFQQ 156
L ++V L G K P +I L + + S +
Sbjct: 63 ----LMESLSADEKVILVGHSLGGMNLGLAMEKYPQKIYAAVFLAAFMPDSVHNSSFVLE 118
Query: 157 LRIPLLGEFTAQNAIMAERFIEAGSPYVLKLDKADVYRLPYLASSGPGFALLEAARKVN- 215
+ + + Y S AL + + +
Sbjct: 119 QYNERTPAENWLDTQFLPYGSPEEPLTSMFFGPKFLAHKLYQLCSPEDLALASSLVRPSS 178
Query: 216 -FKDISSRIGAGFSSGSWDKPVLVAWGISDKYLPQSVAEEFQKGNPNVVKLQMIEGAGHM 274
F + S+ + DK +P+ + I+GA HM
Sbjct: 179 LFMEDLSKAKYFTDERFGSVKRVYIVCTEDKGIPEEFQRWQIDNIGV-TEAIEIKGADHM 237
Query: 275 PQEDWPEKVVDGLRYF 290
P+K+ L
Sbjct: 238 AMLCEPQKLCASLLEI 253
|
| >d1b6ga_ c.69.1.8 (A:) Haloalkane dehalogenase {Xanthobacter autotrophicus [TaxId: 280]} Length = 310 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloalkane dehalogenase domain: Haloalkane dehalogenase species: Xanthobacter autotrophicus [TaxId: 280]
Score = 89.6 bits (220), Expect = 2e-21
Identities = 58/278 (20%), Positives = 100/278 (35%), Gaps = 15/278 (5%)
Query: 22 RWFVRETGSADSRLGTIVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGFGFSDKPEK 81
R + G++D+ + LHG P+ SY YR ++ +++G APD+ GFG SDKP
Sbjct: 35 RAHYLDEGNSDAE-DVFLCLHGEPTWSYLYRKMIPVFAESGARVIAPDFFGFGKSDKPVD 93
Query: 82 GYDDFDFTENEFHEELDKLLDVLEVKYPFFLVVQGFLVGSYGLTWALKNPSRISKLAILN 141
D F + + +V G GLT + +PSR +L I+N
Sbjct: 94 EEDYTFEFHRNFLLA-----LIERLDLRNITLVVQDWGGFLGLTLPMADPSRFKRLIIMN 148
Query: 142 SPLTASSPLPGLFQQLRIPL-------LGEFTAQNAIMAERFIEAGSPYVLK--LDKADV 192
+ L F + + + ++F++ +P + +
Sbjct: 149 ACLMTDPVTQPAFSAFVTQPADGFTAWKYDLVTPSDLRLDQFMKRWAPTLTEAEASAYAA 208
Query: 193 YRLPYLASSGPGFALLEAARKVNFKDISSRIGAGFSSGSWDKPVLVAWGISDKYLPQSVA 252
+G A++ S F W+ +A G+ DK L V
Sbjct: 209 PFPDTSYQAGVRKFPKMVAQRDQACIDISTEAISFWQNDWNGQTFMAIGMKDKLLGPDVM 268
Query: 253 EEFQKGNPNVVKLQMIEGAGHMPQEDWPEKVVDGLRYF 290
+ + I AGH QE + + L++F
Sbjct: 269 YPMKALINGCPEPLEIADAGHFVQEFGEQVAREALKHF 306
|
| >d1va4a_ c.69.1.12 (A:) Arylesterase {Pseudomonas fluorescens [TaxId: 294]} Length = 271 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Arylesterase species: Pseudomonas fluorescens [TaxId: 294]
Score = 84.2 bits (206), Expect = 1e-19
Identities = 48/278 (17%), Positives = 91/278 (32%), Gaps = 10/278 (3%)
Query: 14 SYIKSGEYRWFVRETGSADSRLGTIVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGF 73
+++ + + ++ GS ++F HG + + M +S G+ A D GF
Sbjct: 2 TFVAKDGTQIYFKDWGSGK----PVLFSHGWLLDADMWEYQMEYLSSRGYRTIAFDRRGF 57
Query: 74 GFSDKPEKGYDDFDFTENEFHEELDKLLDVLEVKYPFFLVVQGFLVGSYGLTWALKNPSR 133
G SD+P G D F ++ L LV G A +R
Sbjct: 58 GRSDQPWTGNDYDTFADDIAQ------LIEHLDLKEVTLVGFSMGGGDVARYIARHGSAR 111
Query: 134 ISKLAILNSPLTASSPLPGLFQQLRIPLLGEFTAQNAIMAERFIEAGSPYVLKLDKADVY 193
++ L +L + P Q + + + F + +FI + ++K V
Sbjct: 112 VAGLVLLGAVTPLFGQKPDYPQGVPLDVFARFKTELLKDRAQFISDFNAPFYGINKGQVV 171
Query: 194 RLPYLASSGPGFALLEAARKVNFKDISSRIGAGFSSGSWDKPVLVAWGISDKYLPQSVAE 253
+ L V+ + D P LV G D+ +P
Sbjct: 172 SQGVQTQTLQIALLASLKATVDCVTAFAETDFRPDMAKIDVPTLVIHGDGDQIVPFETTG 231
Query: 254 EFQKGNPNVVKLQMIEGAGHMPQEDWPEKVVDGLRYFF 291
+ +L++ + A H +++ + L F
Sbjct: 232 KVAAELIKGAELKVYKDAPHGFAVTHAQQLNEDLLAFL 269
|
| >d1q0ra_ c.69.1.28 (A:) Aclacinomycin methylesterase RdmC {Streptomyces purpurascens [TaxId: 1924]} Length = 297 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Aclacinomycin methylesterase RdmC domain: Aclacinomycin methylesterase RdmC species: Streptomyces purpurascens [TaxId: 1924]
Score = 83.8 bits (205), Expect = 2e-19
Identities = 40/297 (13%), Positives = 75/297 (25%), Gaps = 27/297 (9%)
Query: 15 YIKSGEYRWFVRETGSADSRLGTIVFLHGAPSHSYSYRNVMSQM-SDAGFHCFAPDWLGF 73
+ SG+ + + G ++ + G + + + ++ +D G H D
Sbjct: 4 IVPSGDVELWSDDFGDPADP--ALLLVMGGNLSALGWPDEFARRLADGGLHVIRYDHRDT 61
Query: 74 GFSDKPEKGYDDFDFTENEFHEELDKLLDVLEVKYPFFLVVQGFLVGSYGLTWALKNPSR 133
G S D D + + VV + + AL + R
Sbjct: 62 GRSTT----RDFAAHPYGFGELAADAVAVLDGWGVDRAHVVGLSMGATITQVIALDHHDR 117
Query: 134 ISKLAILNSPLTASSPLPGLFQQLRI-PLLGEFTAQNAIMAERFIEAGSPYVLKLDKADV 192
+S L +L + + +R P L + P + +
Sbjct: 118 LSSLTMLLGGGLDIDFDANIERVMRGEPTLDGLPGPQQPFLDALALMNQPAEGRAAEVAK 177
Query: 193 YRLPYLASSGPGFALLEAARKVNFKDISSRIGAGFSSGSW------------------DK 234
+ SG G +A + G +
Sbjct: 178 RVSKWRILSGTGVPFDDAEYARWEERAIDHAGGVLAEPYAHYSLTLPPPSRAAELREVTV 237
Query: 235 PVLVAWGISDKYLPQSVAEEFQKGNPNVVKLQMIEGAGHMPQEDWPEKVVDGLRYFF 291
P LV D P + P +L I G GH + + +
Sbjct: 238 PTLVIQAEHDPIAPAPHGKHLAGLIPTA-RLAEIPGMGHALPSSVHGPLAEVILAHT 293
|
| >d1bn7a_ c.69.1.8 (A:) Haloalkane dehalogenase {Rhodococcus sp. [TaxId: 1831]} Length = 291 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloalkane dehalogenase domain: Haloalkane dehalogenase species: Rhodococcus sp. [TaxId: 1831]
Score = 83.8 bits (205), Expect = 3e-19
Identities = 58/288 (20%), Positives = 98/288 (34%), Gaps = 24/288 (8%)
Query: 15 YIKSGEYRWFVRETGSADSRLGTIVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGFG 74
Y++ R + G D ++FLHG P+ SY +RN++ ++ C APD +G G
Sbjct: 11 YVEVLGERMHYVDVGPRDGT--PVLFLHGNPTSSYLWRNIIPHVAP-SHRCIAPDLIGMG 67
Query: 75 FSDKPEKGYDDFDFTENEFHEELDKLLDVLEVKYPFFLVVQGF-LVGSYGLTWALKNPSR 133
SDKP+ Y D +E +V+ + G WA +NP R
Sbjct: 68 KSDKPDLDYFFDDHVRYLDAF--------IEALGLEEVVLVIHDWGSALGFHWAKRNPER 119
Query: 134 ISKLAILNSPLTASSPLPGLFQQ-------LRIPLLGEFTAQNAIMAERFIEAGSPYVLK 186
+ +A + + + E E + L
Sbjct: 120 VKGIACMEFIRPIPTWDEWPEFARETFQAFRTADVGRELIIDQNAFIEGVLPKCVVRPLT 179
Query: 187 LDKADVYRLPYLASSGPGFALLEAARKVNFKDISSRIGAGFSSGSW----DKPVLVAWGI 242
+ D YR P+L + ++ + + +W P L+ WG
Sbjct: 180 EVEMDHYREPFLKPVDREPLWRFPNEIPIAGEPANIVALVEAYMNWLHQSPVPKLLFWGT 239
Query: 243 SDKYLPQSVAEEFQKGNPNVVKLQMIEGAGHMPQEDWPEKVVDGLRYF 290
+P + A + PN K I H QED P+ + + +
Sbjct: 240 PGVLIPPAEAARLAESLPNC-KTVDIGPGLHYLQEDNPDLIGSEIARW 286
|
| >d1mj5a_ c.69.1.8 (A:) Haloalkane dehalogenase {Sphingomonas paucimobilis, UT26, LinB [TaxId: 13689]} Length = 298 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloalkane dehalogenase domain: Haloalkane dehalogenase species: Sphingomonas paucimobilis, UT26, LinB [TaxId: 13689]
Score = 83.8 bits (205), Expect = 3e-19
Identities = 54/288 (18%), Positives = 95/288 (32%), Gaps = 21/288 (7%)
Query: 15 YIKSGEYRWFVRETGSADSRLGTIVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGFG 74
+I+ R + G+ D I+F HG P+ SY +RN+M + A D +G G
Sbjct: 12 FIEIKGRRMAYIDEGTGD----PILFQHGNPTSSYLWRNIMPHCAG-LGRLIACDLIGMG 66
Query: 75 FSDKPEKGYDDFDFTENEFHEELDKLLDVLEVKYPFFLVVQGFLVGSYGLTWALKNPSRI 134
SDK + + H + L ++V + G WA ++ R+
Sbjct: 67 DSDKLDPSGPERYA--YAEHRDYLDALWEALDLGDRVVLVVHDWGSALGFDWARRHRERV 124
Query: 135 SKLAILNSPLTASSPLPGLFQQL------RIPLLGEFTAQNAIMAERFIEAGSPYVLKLD 188
+A + + Q R E Q+ + E+ + L
Sbjct: 125 QGIAYMEAIAMPIEWADFPEQDRDLFQAFRSQAGEELVLQDNVFVEQVLPGLILRPLSEA 184
Query: 189 KADVYRLPYLASSGPGFALLEAARKVNFKDISSRIGAGFSS-----GSWDKPVLVAWGIS 243
+ YR P+LA+ L R++ + + A P L
Sbjct: 185 EMAAYREPFLAAGEARRPTLSWPRQIPIAGTPADVVAIARDYAGWLSESPIPKLFINAEP 244
Query: 244 DKYLPQSVAEEFQKGNPNVVKLQMIEGAGHMPQEDWPEKVVDGLRYFF 291
+F + PN ++ H QED P+++ + F
Sbjct: 245 GALTTGR-MRDFCRTWPNQT--EITVAGAHFIQEDSPDEIGAAIAAFV 289
|
| >d2rhwa1 c.69.1.10 (A:4-286) 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (BPHD) {Burkholderia xenovorans [TaxId: 36873]} Length = 283 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carbon-carbon bond hydrolase domain: 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (BPHD) species: Burkholderia xenovorans [TaxId: 36873]
Score = 83.0 bits (203), Expect = 4e-19
Identities = 40/276 (14%), Positives = 84/276 (30%), Gaps = 16/276 (5%)
Query: 19 GEYRWFVRETGSADSRLGTIVFLHGAPSHSYSYRNVMSQMS---DAGFHCFAPDWLGFGF 75
++ E G+ + T++ LHG + + N + DAG+ D GF
Sbjct: 18 SDFNIHYNEAGNGE----TVIMLHGGGPGAGGWSNYYRNVGPFVDAGYRVILKDSPGFNK 73
Query: 76 SDKPEKGYDDFDFTENEFHEELDKLLDVLEVKYPFFLVVQGFLVGSYGLTWALKNPSRIS 135
SD +D + +V + G+ L +AL+ P RI
Sbjct: 74 SDAVVMDEQRGLVNARAVKGLMDA------LDIDRAHLVGNAMGGATALNFALEYPDRIG 127
Query: 136 KLAILNSPLTASSPLPGLFQQLRIPLLGEFTAQNAIMAERFIEAGSPYVLKLDKADVYRL 195
KL ++ S + + L + + ++ ++ + + +
Sbjct: 128 KLILMGPGGLGPSMFAPMPMEGIKLLFKLYAEPSYETLKQMLQVFLYDQSLITEELLQGR 187
Query: 196 PYLASSGPGFALLEAARKVNFKDISSRIGAGFSSGSWDKPVLVAWGISDKYLPQSVAEEF 255
P + + A G + WG D+++P +
Sbjct: 188 WEAIQRQPEHLKNFLISAQKAPLSTWDVTARL--GEIKAKTFITWGRDDRFVPLDHGLKL 245
Query: 256 QKGNPNVVKLQMIEGAGHMPQEDWPEKVVDGLRYFF 291
+ +L + GH Q + ++ + F
Sbjct: 246 LWNIDDA-RLHVFSKCGHWAQWEHADEFNRLVIDFL 280
|
| >d1ehya_ c.69.1.11 (A:) Bacterial epoxide hydrolase {Agrobacterium radiobacter [TaxId: 358]} Length = 293 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Epoxide hydrolase domain: Bacterial epoxide hydrolase species: Agrobacterium radiobacter [TaxId: 358]
Score = 82.3 bits (201), Expect = 9e-19
Identities = 44/289 (15%), Positives = 89/289 (30%), Gaps = 20/289 (6%)
Query: 15 YIKSGEYRWFVRETGSADSRLGTIVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGFG 74
++ + + G+ T++ LHG P + + V+ +++ + PD GFG
Sbjct: 12 EVQLPDVKIHYVREGAGP----TLLLLHGWPGFWWEWSKVIGPLAE-HYDVIVPDLRGFG 66
Query: 75 FSDKPEKGYDDFDFTENEFHEELDKLLDVLEVKYPFFLVVQGFLVGSYGLTWALKNPSRI 134
S+KP+ + ++ + + VV + K R+
Sbjct: 67 DSEKPDLNDLSKYSLDKAADDQAA---LLDALGIEKAYVVGHDFAAIVLHKFIRKYSDRV 123
Query: 135 SKLAILNSPLTASSPL------------PGLFQQLRIPLLGEFTAQNAIMAERFIEAGSP 182
K AI + P+ Q + + + +
Sbjct: 124 IKAAIFDPIQPDFGPVYFGLGHVHESWYSQFHQLDMAVEVVGSSREVCKKYFKHFFDHWS 183
Query: 183 YVLKLDKADVYRLPYLASSGPGFALLEAARKVNFKDISSRIGAGFSSGSWDKPVLVAWGI 242
Y +L + + P + + D PV + WG+
Sbjct: 184 YRDELLTEEELEVHVDNCMKPDNIHGGFNYYRANIRPDAALWTDLDHTMSDLPVTMIWGL 243
Query: 243 SDKYLPQSVAEEFQKGNPNVVKLQMIEGAGHMPQEDWPEKVVDGLRYFF 291
D +P + EF + ++ IE GH + PE +D ++ F
Sbjct: 244 GDTCVPYAPLIEFVPKYYSNYTMETIEDCGHFLMVEKPEIAIDRIKTAF 292
|
| >d1uk8a_ c.69.1.10 (A:) Meta-cleavage product hydrolase CumD {Pseudomonas fluorescens [TaxId: 294]} Length = 271 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carbon-carbon bond hydrolase domain: Meta-cleavage product hydrolase CumD species: Pseudomonas fluorescens [TaxId: 294]
Score = 81.0 bits (198), Expect = 2e-18
Identities = 52/286 (18%), Positives = 96/286 (33%), Gaps = 25/286 (8%)
Query: 11 EYGSYIKSGEYRWFVRETGSADSRLGTIVFLHGAPSHSYSYRNVMSQMSD--AGFHCFAP 68
E G I + + G ++ +HG+ +Y N + + AP
Sbjct: 3 EIGKSILAAGVLTNYHDVGEGQ----PVILIHGSGPGVSAYANWRLTIPALSKFYRVIAP 58
Query: 69 DWLGFGFSDKPEKGYDDFDFTENEFHEELDKLLDVLEVKYPFFLVVQGFLVGSY-GLTWA 127
D +GFGF+D+PE D + +D + G G + A
Sbjct: 59 DMVGFGFTDRPENYNYSKDSWVDHIIGIMDA-------LEIEKAHIVGNAFGGGLAIATA 111
Query: 128 LKNPSRISKLAILNSPLTASSPLPGLFQQLRIPLLGEFTAQNAIMAERFIEAGSPYVLKL 187
L+ R+ ++ ++ + T GL +I R + Y L
Sbjct: 112 LRYSERVDRMVLMGAAGTRFDVTEGLNAVWGYT--------PSIENMRNLLDIFAYDRSL 163
Query: 188 DKADVYRLPYLASSGPGF--ALLEAARKVNFKDISSRIGAGFSSGSWDKPVLVAWGISDK 245
++ RL Y AS PGF + + + I + + + L+ G D+
Sbjct: 164 VTDELARLRYEASIQPGFQESFSSMFPEPRQRWIDALASSDEDIKTLPNETLIIHGREDQ 223
Query: 246 YLPQSVAEEFQKGNPNVVKLQMIEGAGHMPQEDWPEKVVDGLRYFF 291
+P S + + +L + GH Q + ++ + FF
Sbjct: 224 VVPLSSSLRLGELIDRA-QLHVFGRCGHWTQIEQTDRFNRLVVEFF 268
|
| >d1j1ia_ c.69.1.10 (A:) Meta cleavage compound hydrolase CarC {Janthinobacterium sp. J3 [TaxId: 213804]} Length = 268 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carbon-carbon bond hydrolase domain: Meta cleavage compound hydrolase CarC species: Janthinobacterium sp. J3 [TaxId: 213804]
Score = 80.3 bits (196), Expect = 3e-18
Identities = 39/279 (13%), Positives = 77/279 (27%), Gaps = 21/279 (7%)
Query: 15 YIKSGEYRWFVRETGSADSRLGTIVFLHGAPSHSYSYRNVMSQMSD--AGFHCFAPDWLG 72
++ +G E G ++ +HG + + S N + + + A D LG
Sbjct: 6 FVNAGGVETRYLEAGKGQ----PVILIHGGGAGAESEGNWRNVIPILARHYRVIAMDMLG 61
Query: 73 FGFSDKPEKGYDDFDFTENEFHEELDKLLDVLEVKYPFFLVVQGFLVGSYGLTWALKNPS 132
FG + KP+ Y + + +V + ++ +
Sbjct: 62 FGKTAKPDIEYTQDRRIRHLHDFI-----KAMNFDGKVSIVGNSMGGATGL-GVSVLHSE 115
Query: 133 RISKLAILNSPLTASSPLPGLFQQLRIPLLGEFTAQNAIMAERFIEAGSPYVLKLDKADV 192
++ L ++ S GL ++ L + +
Sbjct: 116 LVNALVLMGSA--------GLVVEIHEDLRPIINYDFTREGMVHLVKALTNDGFKIDDAM 167
Query: 193 YRLPYLASSGPGFALLEAARKVNFKDISSRIGAGFSSGSWDKPVLVAWGISDKYLPQSVA 252
Y ++ A ++ P LV G DK +P A
Sbjct: 168 INSRYTYATDEATRKAYVATMQWIREQGGLFYDPEFIRKVQVPTLVVQGKDDKVVPVETA 227
Query: 253 EEFQKGNPNVVKLQMIEGAGHMPQEDWPEKVVDGLRYFF 291
+F + +I GH + PE + F
Sbjct: 228 YKFLDLIDDS-WGYIIPHCGHWAMIEHPEDFANATLSFL 265
|
| >d1mtza_ c.69.1.7 (A:) Tricorn interacting factor F1 {Archaeon Thermoplasma acidophilum [TaxId: 2303]} Length = 290 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Proline iminopeptidase-like domain: Tricorn interacting factor F1 species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Score = 80.4 bits (196), Expect = 4e-18
Identities = 45/293 (15%), Positives = 94/293 (32%), Gaps = 20/293 (6%)
Query: 14 SYIKSGEYRWFVRETGSADSRLGTIVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGF 73
+Y K + + + + + ++ +HG P S+ Y + M+ G D G
Sbjct: 5 NYAKVNGIYIYYKLCKAPEEK-AKLMTMHGGPGMSHDYLLSLRDMTKEGITVLFYDQFGC 63
Query: 74 GFSDKPEKGYDDFDFTENEFHEELDKLLDVLEVKYPFFLVVQGFLVGSYGLTWALKNPSR 133
G S++P++ D+ E KL +V + L +A+K
Sbjct: 64 GRSEEPDQSKFTIDYGVEEAEALRSKLFGNEKVFLMGSSYGG-----ALALAYAVKYQDH 118
Query: 134 ISKLAILNSPLTASSPLPGLFQQLR------IPLLGEFTAQNAIMAERFIEAGSPYVLKL 187
+ L + + + + + + + ++ + + + EA + + +
Sbjct: 119 LKGLIVSGGLSSVPLTVKEMNRLIDELPAKYRDAIKKYGSSGSYENPEYQEAVNYFYHQH 178
Query: 188 DKADVYRLPYLASSGPGFALLEAARKVNFKDISSRIGAGFSSGSWDK------PVLVAWG 241
P + S R +N + + G DK P L+ G
Sbjct: 179 LLRSEDWPPEVLKSLEYAERRNVYRIMNGPNEFTITGTIKDWDITDKISAIKIPTLITVG 238
Query: 242 ISDKYLPQSVAEEFQKGNPNVVKLQMIEGAGHMPQEDWPEKVVDGLRYFFLNY 294
D+ P VA + +L + H+ + E L F L +
Sbjct: 239 EYDEVTPN-VARVIHEKIAG-SELHVFRDCSHLTMWEDREGYNKLLSDFILKH 289
|
| >d1zd3a2 c.69.1.11 (A:225-547) Mammalian epoxide hydrolase, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 322 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Epoxide hydrolase domain: Mammalian epoxide hydrolase, C-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Score = 79.5 bits (194), Expect = 1e-17
Identities = 54/304 (17%), Positives = 97/304 (31%), Gaps = 44/304 (14%)
Query: 22 RWFVRETGSADSRLGTIVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGFGFSDKPEK 81
R E GS + HG P YS+R + ++ AG+ A D G+G S P +
Sbjct: 23 RLHFVELGSGP----AVCLCHGFPESWYSWRYQIPALAQAGYRVLAMDMKGYGESSAPPE 78
Query: 82 GYDDFDFTENEFHEELDKLLDVLEVKYPFFLVVQGFLVGSYGLTWALKNPSRISKLAILN 141
+ + L + + + G AL P R+ +A LN
Sbjct: 79 IEEYCMEVLCKEMVTFLDKLGLSQAVFIGH-----DWGGMLVWYMALFYPERVRAVASLN 133
Query: 142 SPLTASSPLPGLFQQLRI------------PLLGEFTAQNAIMA--ERFIEAGSPYVLKL 187
+P ++P + ++ P + E + + + A VL +
Sbjct: 134 TPFIPANPNMSPLESIKANPVFDYQLYFQEPGVAEAELEQNLSRTFKSLFRASDESVLSM 193
Query: 188 DKADVYRLPYLASSGPGF-----------ALLEAARKVNFKDISSRIGAGFSSGSWD--- 233
K ++ S ++ +K F+ + + W
Sbjct: 194 HKVCEAGGLFVNSPEEPSLSRMVTEEEIQFYVQQFKKSGFRGPLNWYRNMERNWKWACKS 253
Query: 234 ------KPVLVAWGISDKYLPQSVAEEFQKGNPNVVKLQMIEGAGHMPQEDWPEKVVDGL 287
P L+ D L +++ + P++ K IE GH Q D P +V L
Sbjct: 254 LGRKILIPALMVTAEKDFVLVPQMSQHMEDWIPHL-KRGHIEDCGHWTQMDKPTEVNQIL 312
Query: 288 RYFF 291
+
Sbjct: 313 IKWL 316
|
| >d1hkha_ c.69.1.12 (A:) Gamma-lactamase {Aureobacterium sp. [TaxId: 51671]} Length = 279 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Gamma-lactamase species: Aureobacterium sp. [TaxId: 51671]
Score = 78.4 bits (191), Expect = 2e-17
Identities = 56/279 (20%), Positives = 87/279 (31%), Gaps = 16/279 (5%)
Query: 18 SGEYRWFVRETGSADSRLGTIVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGFGFSD 77
S + + GS +V +HG P +S+ ++ G+ D GFG S
Sbjct: 10 STPIELYYEDQGSGQ----PVVLIHGYPLDGHSWERQTRELLAQGYRVITYDRRGFGGSS 65
Query: 78 KPEKGYDDFDFTENEFHEELDKLLDVLEVKYPFFLVVQGFLVGSYGLTWALKNPSRISKL 137
K GYD F + L LV G A R++KL
Sbjct: 66 KVNTGYDYDTFAADLHTVLETLDLR------DVVLVGFSMGTGELARYVARYGHERVAKL 119
Query: 138 AILNSPLTASSPLPGLFQQLRIPLLGEFTAQNAIMAERFIEAGSPYVLKLDKADVYRLPY 197
A L S + + + A + LD+ R+
Sbjct: 120 AFLASLEPFLVQRDDNPEGVPQEVFDGIEAAAKGDRFAWFTDFYKNFYNLDENLGSRISE 179
Query: 198 LASSGPGFALLEAARKVNFKDISSRIGAGFSSGSW----DKPVLVAWGISDKYLP-QSVA 252
A +G + +A + + + I S KP L+ G D LP + A
Sbjct: 180 QAVTGSWNVAIGSAPVAAYAVVPAWIEDFRSDVEAVRAAGKPTLILHGTKDNILPIDATA 239
Query: 253 EEFQKGNPNVVKLQMIEGAGHMPQEDWPEKVVDGLRYFF 291
F + P +EGA H ++V L+ F
Sbjct: 240 RRFHQAVPE-ADYVEVEGAPHGLLWTHADEVNAALKTFL 277
|
| >d1a8sa_ c.69.1.12 (A:) Chloroperoxidase F {Pseudomonas fluorescens [TaxId: 294]} Length = 273 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Chloroperoxidase F species: Pseudomonas fluorescens [TaxId: 294]
Score = 76.9 bits (187), Expect = 6e-17
Identities = 38/272 (13%), Positives = 79/272 (29%), Gaps = 12/272 (4%)
Query: 22 RWFVRETGSADSRLGTIVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGFGFSDKPEK 81
+ + ++ GS IVF HG P ++ S+ + M ++ G+ A D G G S
Sbjct: 10 QIYYKDWGSGQ----PIVFSHGWPLNADSWESQMIFLAAQGYRVIAHDRRGHGRS----- 60
Query: 82 GYDDFDFTENEFHEELDKLLDVLEVKYPFFLVVQGFLVGSYGLTWALKNPSRISKLAILN 141
+ + + + + L L G +R++K +++
Sbjct: 61 -SQPWSGNDMDTYADDLAQLIEHLDLRDAVLFGFSTGGGEVARYIGRHGTARVAKAGLIS 119
Query: 142 SPLTASSPLPGLFQQLRIPLLGEFTAQNAIMAERFIE--AGSPYVLKLDKADVYRLPYLA 199
+ L + + + + + A P+ +
Sbjct: 120 AVPPLMLKTEANPGGLPMEVFDGIRQASLADRSQLYKDLASGPFFGFNQPGAKSSAGMVD 179
Query: 200 SSGPGFALLEAARKVNFKDISSRIGAGFSSGSWDKPVLVAWGISDKYLPQSVAEEFQKGN 259
+ S D P LV G +D+ +P +
Sbjct: 180 WFWLQGMAAGHKNAYDCIKAFSETDFTEDLKKIDVPTLVVHGDADQVVPIEASGIASAAL 239
Query: 260 PNVVKLQMIEGAGHMPQEDWPEKVVDGLRYFF 291
L++ GA H + +++ L F
Sbjct: 240 VKGSTLKIYSGAPHGLTDTHKDQLNADLLAFI 271
|
| >d1m33a_ c.69.1.26 (A:) Biotin biosynthesis protein BioH {Escherichia coli [TaxId: 562]} Length = 256 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Biotin biosynthesis protein BioH domain: Biotin biosynthesis protein BioH species: Escherichia coli [TaxId: 562]
Score = 76.4 bits (186), Expect = 7e-17
Identities = 42/267 (15%), Positives = 78/267 (29%), Gaps = 19/267 (7%)
Query: 24 FVRETGSADSRLGTIVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGY 83
+ + G + +V LHG ++ +R + ++S F D GFG S
Sbjct: 3 WWQTKGQGNV---HLVLLHGWGLNAEVWRCIDEELSS-HFTLHLVDLPGFGRSRGFGALS 58
Query: 84 DDFDFTENEFHEELDKLLDVLEVKYPFFLVVQGFLVGSYGLTWALKNPSRISKLAILNSP 143
+ + L G AL +P R+ L + S
Sbjct: 59 LADMAEAVLQQ------------APDKAIWLGWSLGGLVASQIALTHPERVRALVTVAS- 105
Query: 144 LTASSPLPGLFQQLRIPLLGEFTAQNAIMAERFIEAGSPYVLKLDKADVYRLPYLASSGP 203
+ + ++ +L F Q + +R +E + L +
Sbjct: 106 -SPCFSARDEWPGIKPDVLAGFQQQLSDDQQRTVERFLALQTMGTETARQDARALKKTVL 164
Query: 204 GFALLEAARKVNFKDISSRIGAGFSSGSWDKPVLVAWGISDKYLPQSVAEEFQKGNPNVV 263
+ E +I + + P L +G D +P+ V K P+
Sbjct: 165 ALPMPEVDVLNGGLEILKTVDLRQPLQNVSMPFLRLYGYLDGLVPRKVVPMLDKLWPHS- 223
Query: 264 KLQMIEGAGHMPQEDWPEKVVDGLRYF 290
+ + A H P P + L
Sbjct: 224 ESYIFAKAAHAPFISHPAEFCHLLVAL 250
|
| >d1c4xa_ c.69.1.10 (A:) 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (BPHD) {Rhodococcus sp., strain rha1 [TaxId: 1831]} Length = 281 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carbon-carbon bond hydrolase domain: 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (BPHD) species: Rhodococcus sp., strain rha1 [TaxId: 1831]
Score = 76.5 bits (186), Expect = 8e-17
Identities = 46/282 (16%), Positives = 86/282 (30%), Gaps = 15/282 (5%)
Query: 15 YIKSGEYRWFVRETGSADSRLGTIVFLHGAPSHSYSYRNVMSQMSD--AGFHCFAPDWLG 72
SG G S +V LHGA +++ N + D F APD +G
Sbjct: 8 RFPSGTLASHALVAGDPQSP--AVVLLHGAGPGAHAASNWRPIIPDLAENFFVVAPDLIG 65
Query: 73 FGFSDKPEKGYDDFDFTENEFHEELDKLLDVLEVKYPFFLVVQGFLVGSYGLTWALKNPS 132
F + + + ++ + F + + +VG+
Sbjct: 66 F-------GQSEYPETYPGHIMSWVGMRVEQILGLMNHFGIEKSHIVGNSMGGAVTLQLV 118
Query: 133 RISKLAILNSPLTASSPLPGLFQQLRIPLLGEFTAQNAIMAERFIEAG---SPYVLKLDK 189
+ L S P + + L F A + R + P +
Sbjct: 119 VEAPERFDKVALMGSVGAPMNARPPELARLLAFYADPRLTPYRELIHSFVYDPENFPGME 178
Query: 190 ADVYRLPYLASSGPGFALLEAARKVNFKDISSRIGAGFSSGSWDKPVLVAWGISDKYLPQ 249
V +A+ + E + + S + + G VLV G D+ +P
Sbjct: 179 EIVKSRFEVANDPEVRRIQEVMFESMKAGMESLVIPPATLGRLPHDVLVFHGRQDRIVPL 238
Query: 250 SVAEEFQKGNPNVVKLQMIEGAGHMPQEDWPEKVVDGLRYFF 291
+ K + +L +++ GH Q + + + L F
Sbjct: 239 DTSLYLTKHLKHA-ELVVLDRCGHWAQLERWDAMGPMLMEHF 279
|
| >d1brta_ c.69.1.12 (A:) Bromoperoxidase A2 {Streptomyces aureofaciens [TaxId: 1894]} Length = 277 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Bromoperoxidase A2 species: Streptomyces aureofaciens [TaxId: 1894]
Score = 73.4 bits (178), Expect = 1e-15
Identities = 54/277 (19%), Positives = 85/277 (30%), Gaps = 14/277 (5%)
Query: 18 SGEYRWFVRETGSADSRLGTIVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGFGFSD 77
S + + G+ +V +HG P +S+ + + DAG+ D GFG S
Sbjct: 10 STSIDLYYEDHGTGQ----PVVLIHGFPLSGHSWERQSAALLDAGYRVITYDRRGFGQSS 65
Query: 78 KPEKGYDDFDFTENEFHEELDKLLDVLEVKYPFFLVVQGFLVGSYGLTWALKNPSRISKL 137
+P GYD F + + LV G + +RI+K+
Sbjct: 66 QPTTGYDYDTFAADLNT------VLETLDLQDAVLVGFSTGTGEVARYVSSYGTARIAKV 119
Query: 138 AILNSPLTASSPLPGLFQQLRIPLLGE-FTAQNAIMAERFIEAGSPYVLKLDKADVYRLP 196
A L S + A F LD+ R+
Sbjct: 120 AFLASLEPFLLKTDDNPDGAAPQEFFDGIVAAVKADRYAFYTGFFNDFYNLDENLGTRIS 179
Query: 197 YLASSGPGFALLEAARKVNFKDISSRIGAGFSS-GSWDKPVLVAWGISDKYLP-QSVAEE 254
A ++ + D P L+ G D+ LP ++ A
Sbjct: 180 EEAVRNSWNTAASGGFFAAAAAPTTWYTDFRADIPRIDVPALILHGTGDRTLPIENTARV 239
Query: 255 FQKGNPNVVKLQMIEGAGHMPQEDWPEKVVDGLRYFF 291
F K P+ + +EGA H E+V L F
Sbjct: 240 FHKALPS-AEYVEVEGAPHGLLWTHAEEVNTALLAFL 275
|
| >d1pjaa_ c.69.1.13 (A:) Palmitoyl protein thioesterase 2 {Human (Homo sapiens) [TaxId: 9606]} Length = 268 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterases domain: Palmitoyl protein thioesterase 2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 71.3 bits (173), Expect = 6e-15
Identities = 25/271 (9%), Positives = 66/271 (24%), Gaps = 27/271 (9%)
Query: 38 IVFLHGAPSHSYSYRNVMSQMSDA--GFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHE 95
++ +HG SYS+R+++ +++ G D S +P +
Sbjct: 5 VIVVHGLFDSSYSFRHLLEYINETHPGTVVTVLDLFDGRESLRPL---------WEQVQG 55
Query: 96 ELDKLLDVLEVKYPFFLVVQGFLVGSYGLTWALKNPSR-ISKLAILNSPLTASSPLPGLF 154
+ ++ ++ ++ G + L+SP
Sbjct: 56 FREAVVPIMAKAPQGVHLICYSQGGLVCRALLSVMDDHNVDSFISLSSPQMGQYGDTDYL 115
Query: 155 QQLRIPLLGEFTAQNAIMAERFIEAGSPYV---LKLDKADVYRLPYLASSGPGFALLEAA 211
+ L + + + Y D +G
Sbjct: 116 KWLFPTSMRSNLYRICYSPWGQEFSICNYWHDPHHDDLYLNASSFLALINGERDHPNATV 175
Query: 212 RKVNFKDISSRIGAGFSSGSWDKPVLVAW----GISDKYLPQSVAEEFQKGNPNV----- 262
+ NF + + G P ++ ++ L + + + +
Sbjct: 176 WRKNFLRVGHLVLIGGPDDGVITPWQSSFFGFYDANETVLEMEEQLVYLRDSFGLKTLLA 235
Query: 263 ---VKLQMIEGAGHMPQEDWPEKVVDGLRYF 290
+ + G H + +
Sbjct: 236 RGAIVRCPMAGISHTAWHSNRTLYETCIEPW 266
|
| >d1a88a_ c.69.1.12 (A:) Chloroperoxidase L {Streptomyces lividans [TaxId: 1916]} Length = 275 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Chloroperoxidase L species: Streptomyces lividans [TaxId: 1916]
Score = 71.1 bits (172), Expect = 7e-15
Identities = 48/271 (17%), Positives = 77/271 (28%), Gaps = 8/271 (2%)
Query: 22 RWFVRETGSADSRLGTIVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGFGFSDKPEK 81
F ++ G D +VF HG P + + N M G+ A D G G SD+P
Sbjct: 10 NIFYKDWGPRDGL--PVVFHHGWPLSADDWDNQMLFFLSHGYRVIAHDRRGHGRSDQPST 67
Query: 82 GYDDFDFTENEFHEELDKLLDVLEVKYPFFLVVQGFLVGSYGLTWALKNPSRISKLAILN 141
G+D + + L G V Y ++ ++ +
Sbjct: 68 GHDMDTYAADVAALTEA---LDLRGAVHIGHSTGGGEVARYVARAEPGRVAKAVLVSAVP 124
Query: 142 SPLTASSPLPGLFQQLRIPLLGEFTAQNAIMAERFIEAGSPYVLKLDKADVYRLPYLASS 201
+ S P A N + +G Y + A V +
Sbjct: 125 PVMVKSDTNPDGLPLEVFDEFRAALAANRAQFYIDVPSGPFYGFNREGATVSQGLIDHWW 184
Query: 202 GPGFALLEAARKVNFKDISSRIGAGFSSGSWDKPVLVAWGISDKYLPQS-VAEEFQKGNP 260
G A S ++ G D+ +P + A + +
Sbjct: 185 LQGMMGAANAHYECIAAFSETDFTDDLKRIDVPVLVA-HGTDDQVVPYADAAPKSAELLA 243
Query: 261 NVVKLQMIEGAGHMPQEDWPEKVVDGLRYFF 291
N L+ EG H PE + L F
Sbjct: 244 N-ATLKSYEGLPHGMLSTHPEVLNPDLLAFV 273
|
| >d1azwa_ c.69.1.7 (A:) Proline iminopeptidase {Xanthomonas campestris, pv. citri [TaxId: 339]} Length = 313 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Proline iminopeptidase-like domain: Proline iminopeptidase species: Xanthomonas campestris, pv. citri [TaxId: 339]
Score = 70.6 bits (171), Expect = 1e-14
Identities = 50/299 (16%), Positives = 87/299 (29%), Gaps = 41/299 (13%)
Query: 15 YIKSGE-YRWFVRETGSADSRLGTIVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGF 73
+K + + + + G+ + +V LHG P + + A + D G
Sbjct: 15 SLKVDDRHTLYFEQCGNPHGK--PVVMLHGGPGGGCNDKMRRFHDP-AKYRIVLFDQRGS 71
Query: 74 GFSDKPEKGYDDFDFTENEFHEELDKLLDVLEVKYPFFLVVQGFLVGSYGLTWALKNPSR 133
G S D+ + E L L V + V G + L +A +P +
Sbjct: 72 GRSTPHADLVDNTTWDLVADIERLRTHLGV-----DRWQVFGGSWGSTLALAYAQTHPQQ 126
Query: 134 ISKLAILNSPLTASSPLPGLFQQLRIPLLGEFTAQ-------------NAIMAERFIEAG 180
+++L + L L +Q+ L + + R
Sbjct: 127 VTELVLRGIFLLRRFELEWFYQEGASRLFPDAWEHYLNAIPPVERADLMSAFHRRLTSDD 186
Query: 181 SPYVLKLDKADVYRLPYLASSGPGFALLEAARKVNFKDISSRIGAGFSSGSW-------- 232
L KA + + +F +RI +
Sbjct: 187 EATRLAAAKAWSVWEGATSFLHVDEDFVTGHEDAHFALAFARIENHYFVNGGFFEVEDQL 246
Query: 233 --------DKPVLVAWGISDKYLPQSVAEEFQKGNPNVVKLQMIEGAGHMPQEDWPEKV 283
D P ++ G D P A + K P +LQ+ +GH E PE V
Sbjct: 247 LRDAHRIADIPGVIVHGRYDVVCPLQSAWDLHKAWPK-AQLQISPASGHSAFE--PENV 302
|
| >d1a8qa_ c.69.1.12 (A:) Bromoperoxidase A1 {Streptomyces aureofaciens [TaxId: 1894]} Length = 274 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Bromoperoxidase A1 species: Streptomyces aureofaciens [TaxId: 1894]
Score = 69.9 bits (169), Expect = 2e-14
Identities = 39/275 (14%), Positives = 81/275 (29%), Gaps = 17/275 (6%)
Query: 22 RWFVRETGSADSRLGTIVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGFGFSDKPEK 81
F ++ G +VF+HG P + ++++ + + DAG+ A D G G
Sbjct: 10 EIFYKDWGQGR----PVVFIHGWPLNGDAWQDQLKAVVDAGYRGIAHDRRGHGH------ 59
Query: 82 GYDDFDFTENEFHEELDKLLDVLEVKYPFFLVVQGFLVGSYGL-TWALKNPSRISKLAIL 140
+ D + ++ +V + G R+ +L
Sbjct: 60 -STPVWDGYDFDTFADDLNDLLTDLDLRDVTLVAHSMGGGELARYVGRHGTGRLRSAVLL 118
Query: 141 NSPLTASSPLPGLFQQLRIPLLGEFTAQNAIMAERFIEAGSPYVLKLDKADVYRLPYLAS 200
++ + + +F + + ++
Sbjct: 119 SAIPPVMIKSDKNPDGVPDEVFDALKNGVLTERSQFWKDTAEGFFSANRPGNKVTQGNKD 178
Query: 201 SGPGFALLEAARKVNFK-DISSRIGAGFSSGSWDKPVLVAWGISDKYLP-QSVAEEFQKG 258
+ A+ + D +D P LV G D+ +P + + +
Sbjct: 179 AFWYMAMAQTIEGGVRCVDAFGYTDFTEDLKKFDIPTLVVHGDDDQVVPIDATGRKSAQI 238
Query: 259 NPNVVKLQMIEGAGHMPQ--EDWPEKVVDGLRYFF 291
PN +L++ EG+ H EK L F
Sbjct: 239 IPN-AELKVYEGSSHGIAMVPGDKEKFNRDLLEFL 272
|
| >d1thta_ c.69.1.13 (A:) Myristoyl-ACP-specific thioesterase {Vibrio harveyi [TaxId: 669]} Length = 302 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterases domain: Myristoyl-ACP-specific thioesterase species: Vibrio harveyi [TaxId: 669]
Score = 68.0 bits (165), Expect = 9e-14
Identities = 27/257 (10%), Positives = 56/257 (21%), Gaps = 34/257 (13%)
Query: 23 WFVRETGSADSRLGTIVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKG 82
W + + TI+ G + + +S GFH F D L G
Sbjct: 20 WETPPKENVPFKNNTILIASGFARRMDHFAGLAEYLSTNGFHVFRYDSLHHV-------G 72
Query: 83 YDDFDFTENEFHEELDKLLDVLEVKYPFFLVVQGFLVGSYGLTWALKNPSRISKLAILNS 142
E + L V G + S A + S + ++ +
Sbjct: 73 LSSGSIDEFTMTTGKNSLCTVYHWLQTKGTQNIGLIAASLSARVAYEVISDLELSFLITA 132
Query: 143 PLTASSPLPGLFQQLRIPLLGEFTAQNAIMAERFIEAGSPYVLKLDKADVYRLPYLASSG 202
+ + + D+ + S
Sbjct: 133 --------------------VGVVNLRDTLEKALGFDYLSLPIDELPNDLDFEGHKLGSE 172
Query: 203 PGFALLEAARKVNFKDISSRIGAGFSSGSWDKPVLVAWGISDKYLPQSVAEEFQKGNPNV 262
++ + P++ +D ++ Q +
Sbjct: 173 VFVRDCFEHHWDTLDSTLDKV------ANTSVPLIAFTANNDDWVKQEEVYDMLAHIRTG 226
Query: 263 VKLQMI-EGAGHMPQED 278
G+ H E+
Sbjct: 227 HCKLYSLLGSSHDLGEN 243
|
| >d1r3da_ c.69.1.35 (A:) Hypothetical protein VC1974 {Vibrio cholerae [TaxId: 666]} Length = 264 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Hypothetical protein VC1974 domain: Hypothetical protein VC1974 species: Vibrio cholerae [TaxId: 666]
Score = 66.8 bits (161), Expect = 1e-13
Identities = 24/255 (9%), Positives = 62/255 (24%), Gaps = 13/255 (5%)
Query: 37 TIVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEE 96
+V +HG ++ V+S ++ D G G + + E +
Sbjct: 18 LVVLVHGLLGSGADWQPVLSHLARTQCAALTLDLPGHGTNPERHCDNFAEAVEMIEQTVQ 77
Query: 97 LDKLLDVLEVKYPFFLVVQGFLVGSYGLTWALKNPSRISKLAILNSPLTASSPLPGLFQQ 156
++V L G + + L +
Sbjct: 78 AH------VTSEVPVILVGYSLGGRLIMHGLAQGAFSRLNLRGAIIEGGHFGLQENEEKA 131
Query: 157 LRIPLLGEFTAQNAIMAERFIEAGSPYVLKLDKADVYRLPYLASSGPGFALLEAARKVNF 216
R ++ + + + + + + L + A +
Sbjct: 132 ARWQHDQQWAQRFSQQPIEHVLSDWYQQAVFSSLNHEQRQTLIAQRSANLGSSVAHMLLA 191
Query: 217 KDISSRIGAGFSSGSWDKPVLVAWGISDKYLPQSVAEEFQKGNPNVVKLQMIEGAGHMPQ 276
++ + + + P+ G D Q + + + AGH
Sbjct: 192 TSLAKQPYLLPALQALKLPIHYVCGEQDSKFQQLAE------SSG-LSYSQVAQAGHNVH 244
Query: 277 EDWPEKVVDGLRYFF 291
+ P+ ++
Sbjct: 245 HEQPQAFAKIVQAMI 259
|
| >d1qo7a_ c.69.1.11 (A:) Bacterial epoxide hydrolase {Aspergillus niger [TaxId: 5061]} Length = 394 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Epoxide hydrolase domain: Bacterial epoxide hydrolase species: Aspergillus niger [TaxId: 5061]
Score = 65.5 bits (158), Expect = 1e-12
Identities = 38/304 (12%), Positives = 67/304 (22%), Gaps = 40/304 (13%)
Query: 22 RWFVRETGSADSRLGTIVFLHGAPSHSYSYRNVMSQMSDAG------FHCFAPDWLGFGF 75
S I LHG P + ++ + FH P G+ F
Sbjct: 93 TIHFAALFSEREDAVPIALLHGWPGSFVEFYPILQLFREEYTPETLPFHLVVPSLPGYTF 152
Query: 76 SDKPEKGYDDFDFTENEFHEELDKLLDVLEVKYPFFLVVQGFLVGSYGLTWALKNPSRIS 135
S P D DF + +D+L+ L + + L + +
Sbjct: 153 SSGPP---LDKDFGLMDNARVVDQLMKDLGFGSGYIIQGGDIGSFVGRLLGVGFDACKAV 209
Query: 136 KLAILNSPLTASSPLPGLFQQLRIPLLGEFTAQNAIMAERFIEAGSPYVLKLDKADVYRL 195
L + P + +E + +
Sbjct: 210 HLNLCAMRAPPEGPSIESLSAAEKEGIARMEKFMTDGLAYAMEHSTRPSTIGHVLSSSPI 269
Query: 196 PYLASSGPGF-----------ALLEAARKVNFK-----------------DISSRIGAGF 227
LA G + +LE +
Sbjct: 270 ALLAWIGEKYLQWVDKPLPSETILEMVSLYWLTESFPRAIHTYRETTPTASAPNGATMLQ 329
Query: 228 SSGSWDKPVLVAWGISDKYLPQSVAEEFQKGNPNVVKLQMIEGAGHMPQEDWPEKVVDGL 287
KP ++ D + N+V + GH + P ++ L
Sbjct: 330 KELYIHKPFGFSFFPKDLCPV---PRSWIATTGNLVFFRDHAEGGHFAALERPRELKTDL 386
Query: 288 RYFF 291
F
Sbjct: 387 TAFV 390
|
| >d1k8qa_ c.69.1.6 (A:) Gastric lipase {Dog (Canis familiaris) [TaxId: 9615]} Length = 377 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Gastric lipase domain: Gastric lipase species: Dog (Canis familiaris) [TaxId: 9615]
Score = 65.1 bits (157), Expect = 1e-12
Identities = 40/320 (12%), Positives = 82/320 (25%), Gaps = 64/320 (20%)
Query: 26 RETGSADSRLGTIVFLHGAPSHSYSY------RNVMSQMSDAGFHCFAPDWLGFGFSDKP 79
R+ R HG + + ++ ++ ++DAG+ + + G ++ +
Sbjct: 49 RKNSENIGRRPVAFLQHGLLASATNWISNLPNNSLAFILADAGYDVWLGNSRGNTWARRN 108
Query: 80 EKG-YDDFDFTENEFHEE--------LDKLLDVLEVKYPFFLVVQGFLVGSYGLTWALKN 130
D +F F E +D +L V + G N
Sbjct: 109 LYYSPDSVEFWAFSFDEMAKYDLPATIDFILKKT--GQDKLHYVGHSQGTTIGFIAFSTN 166
Query: 131 PSRISKLAILNSPLTASS-----------------------------PLPGLFQQLRIPL 161
P ++ + ++ P Q L +
Sbjct: 167 PKLAKRIKTFYALAPVATVKYTETLINKLMLVPSFLFKLIFGNKIFYPHHFFDQFLATEV 226
Query: 162 LGEFTAQNAIMAERFIEAGSPYVLKLDKADVYRLPYLASSGPGFALLEAARKV------- 214
T FI G + L + + +L ++ V
Sbjct: 227 CSRETVDLLCSNALFIICGFDTMNLNMSRLDVYLSHNPAGTSVQNVLHWSQAVKSGKFQA 286
Query: 215 --------NFKDISSRIGAGFSSGSWDKPVLVAWGISDKYLPQSVAEEFQKGNPNVVKLQ 266
N + ++ P+ V G +D + PN++ +
Sbjct: 287 FDWGSPVQNMMHYHQSMPPYYNLTDMHVPIAVWNGGNDLLADPHDVDLLLSKLPNLIYHR 346
Query: 267 MIEGAGHMP---QEDWPEKV 283
I H+ D P+ V
Sbjct: 347 KIPPYNHLDFIWAMDAPQAV 366
|
| >d1wm1a_ c.69.1.7 (A:) Proline aminopeptidase {Serratia marcescens [TaxId: 615]} Length = 313 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Proline iminopeptidase-like domain: Proline aminopeptidase species: Serratia marcescens [TaxId: 615]
Score = 63.8 bits (153), Expect = 3e-12
Identities = 49/298 (16%), Positives = 86/298 (28%), Gaps = 40/298 (13%)
Query: 15 YIKSGE-YRWFVRETGSADSRLGTIVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGF 73
++ +G+ +R + +G+ + + VF+HG P S + + + D G
Sbjct: 15 WLDTGDGHRIYWELSGNPNGK--PAVFIHGGPGGGISPHHRQLFDPE-RYKVLLFDQRGC 71
Query: 74 GFSDKPEKGYDDFDFTENEFHEELDKLLDVLEVKYPFFLVVQGFLVGSYGLTWALKNPSR 133
G S +H D +LV G + L +A +P R
Sbjct: 72 GRSR-----PHASLDNNTTWHLVADIERLREMAGVEQWLVFGGSWGSTLALAYAQTHPER 126
Query: 134 ISKLAILNSPLTASSPLPGLFQQ-------------LRIPLLGEFTAQNAIMAERFIEAG 180
+S++ + L +Q L I E A +R A
Sbjct: 127 VSEMVLRGIFTLRKQRLHWYYQDGASRFFPEKWERVLSILSDDERKDVIAAYRQRLTSAD 186
Query: 181 SPYVLKLDKADVYRLPYLASSGPGFALLEAARKVNFKDISSRIGAGFSSGSW-------- 232
L+ K + P + F+ +
Sbjct: 187 PQVQLEAAKLWSVWEGETVTLLPSRESASFGEDDFALAFARIENHYFTHLGFLESDDQLL 246
Query: 233 -------DKPVLVAWGISDKYLPQSVAEEFQKGNPNVVKLQMIEGAGHMPQEDWPEKV 283
P ++ G D A + K P +L ++EGAGH E P +
Sbjct: 247 RNVPLIRHIPAVIVHGRYDMACQVQNAWDLAKAWPE-AELHIVEGAGHSYDE--PGIL 301
|
| >d1cvla_ c.69.1.18 (A:) Lipase {Chromobacterium viscosum [TaxId: 42739]} Length = 319 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Bacterial lipase domain: Lipase species: Chromobacterium viscosum [TaxId: 42739]
Score = 61.0 bits (147), Expect = 3e-11
Identities = 19/146 (13%), Positives = 40/146 (27%), Gaps = 15/146 (10%)
Query: 38 IVFLHGAPSHSYS------YRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTEN 91
++ +HG + + S + G + + GF D P +
Sbjct: 11 VILVHGLAGTDKFANVVDYWYGIQSDLQSHGAKVYVANLSGFQSDDGPNGRGEQ------ 64
Query: 92 EFHEELDKLLDVLEVKYPFFLVVQGFLVGSYGLTWALKNPSRISKLAILNSPLTASSPLP 151
+ ++L L+ G A P ++ + + +P S
Sbjct: 65 -LLAYVKQVLAATGAT-KVNLIGHSQG-GLTSRYVAAVAPQLVASVTTIGTPHRGSEFAD 121
Query: 152 GLFQQLRIPLLGEFTAQNAIMAERFI 177
+ L+ G + A F
Sbjct: 122 FVQDVLKTDPTGLSSTVIAAFVNVFG 147
|
| >d1qlwa_ c.69.1.15 (A:) A novel bacterial esterase {Alcaligenes sp. [TaxId: 512]} Length = 318 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: A novel bacterial esterase domain: A novel bacterial esterase species: Alcaligenes sp. [TaxId: 512]
Score = 57.2 bits (136), Expect = 5e-10
Identities = 27/281 (9%), Positives = 58/281 (20%), Gaps = 42/281 (14%)
Query: 24 FVRETGSADSRLGTIVFLHGAPSHSYSYRNV-------MSQMSDAGFHCFAPDWLGFGFS 76
+VR ++ I +HG ++ G+ + D G G S
Sbjct: 47 YVRYQIPQRAKRYPITLIHGCCLTGMTWETTPDGRMGWDEYFLRKGYSTYVIDQSGRGRS 106
Query: 77 DKPEKGYDDFDFTENEFHEELDKLLDVLEVKYPFFLVVQGFLVGSYGLTWALKNPSRISK 136
+ + L L Y + ++
Sbjct: 107 ATDISAINAVKLG-----KAPASSLPDLFAAGHEAAWAIFRFGPRYPDAFKDTQFPVQAQ 161
Query: 137 LAILNSPLTASSPLPGLFQQLRIPLLGEFTAQNAIMAERFIEAGSPYVLKLDKADVYRLP 196
+ + L + + ++G
Sbjct: 162 AELWQQMVPDWLGSMPTPNPTVANLSKLAIKLDGTVLLSHSQSGIYPFQTAAMNPKGITA 221
Query: 197 YLASSGPGFALLEAARKVNFKDISSRIGAGFSSGSWDKPVLVAWGISDKYLP-------- 248
++ E + + PVLV +G + P
Sbjct: 222 IVSVEPGECPKPEDVKPL-----------------TSIPVLVVFGDHIEEFPRWAPRLKA 264
Query: 249 -QSVAEEFQKGNPNVVKLQM----IEGAGHMPQEDWPEKVV 284
+ + + + + G HM +D V
Sbjct: 265 CHAFIDALNAAGGKGQLMSLPALGVHGNSHMMMQDRNNLQV 305
|
| >d1tqha_ c.69.1.29 (A:) Carboxylesterase Est {Bacillus stearothermophilus [TaxId: 1422]} Length = 242 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase/lipase domain: Carboxylesterase Est species: Bacillus stearothermophilus [TaxId: 1422]
Score = 49.9 bits (117), Expect = 8e-08
Identities = 32/258 (12%), Positives = 73/258 (28%), Gaps = 36/258 (13%)
Query: 37 TIVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEE 96
++ LHG +S R + + G+ C AP + G G + D+ ++
Sbjct: 13 AVLLLHGFTGNSADVRMLGRFLESKGYTCHAPIYKGHGVPPEELVHTGPDDWWQDV---- 68
Query: 97 LDKLLDVLEVKYPFFLVVQGFLVGSYGLTWALKNPSRISKLAILNSPLTASSPLPGLFQQ 156
+ + G S + + L + P +
Sbjct: 69 -----MNGYEFLKNKGYEKIAVAGL-------------SLGGVFSLKLGYTVP----IEG 106
Query: 157 LRIPLLGEFTAQNAIMAERFIEAGSPYVLKLDKADVYRLPYLASSGPGFALLEAARKVNF 216
+ + M E +E Y + K++ + A +
Sbjct: 107 IVTMCAPMYIKSEETMYEGVLEYAREYKKREGKSEEQIEQEMEKFKQTPMKTLKALQELI 166
Query: 217 KDISSRIGAGFSSGSWDKPVLVAWGISDKYLPQSVAEEFQK--GNPNVVKLQMIEGAGHM 274
D+ + P V D+ + A +P +++ E +GH+
Sbjct: 167 ADVRDHL------DLIYAPTFVVQARHDEMINPDSANIIYNEIESPV-KQIKWYEQSGHV 219
Query: 275 PQ-EDWPEKVVDGLRYFF 291
+ +++ + + F
Sbjct: 220 ITLDQEKDQLHEDIYAFL 237
|
| >d1ispa_ c.69.1.18 (A:) Lipase A {Bacillus subtilis [TaxId: 1423]} Length = 179 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Bacterial lipase domain: Lipase A species: Bacillus subtilis [TaxId: 1423]
Score = 47.6 bits (112), Expect = 3e-07
Identities = 18/130 (13%), Positives = 39/130 (30%), Gaps = 14/130 (10%)
Query: 38 IVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEEL 97
+V +HG S+++ + S + G+ + F +
Sbjct: 5 VVMVHGIGGASFNFAGIKSYLVSQGWSRDKLYAVDFWDKTGTNYNNGPVLSRFVQK---- 60
Query: 98 DKLLDVLEVKYPFFLVVQGFLVGSYGLTWA---LKNPSRISKLAILNSP--LTASSPLPG 152
VL+ + + +G + L ++++ + L LT LPG
Sbjct: 61 -----VLDETGAKKVDIVAHSMGGANTLYYIKNLDGGNKVANVVTLGGANRLTTGKALPG 115
Query: 153 LFQQLRIPLL 162
+I
Sbjct: 116 TDPNQKILYT 125
|
| >d1imja_ c.69.1.23 (A:) Ccg1/TafII250-interacting factor B (Cib) {Human (Homo sapiens) [TaxId: 9606]} Length = 208 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Ccg1/TafII250-interacting factor B (Cib) domain: Ccg1/TafII250-interacting factor B (Cib) species: Human (Homo sapiens) [TaxId: 9606]
Score = 46.6 bits (109), Expect = 7e-07
Identities = 17/85 (20%), Positives = 32/85 (37%), Gaps = 3/85 (3%)
Query: 14 SYIKSGEYRWFVRETGSADSRLG-TIVFLHGAPSHSYSYRN--VMSQMSDAGFHCFAPDW 70
I+ F RE + +++ LHG S +++N + +++ AG+ A D
Sbjct: 9 GTIQVQGQALFFREALPGSGQARFSVLLLHGIRFSSETWQNLGTLHRLAQAGYRAVAIDL 68
Query: 71 LGFGFSDKPEKGYDDFDFTENEFHE 95
G G S + + F
Sbjct: 69 PGLGHSKEAAAPAPIGELAPGSFLA 93
|
| >d1imja_ c.69.1.23 (A:) Ccg1/TafII250-interacting factor B (Cib) {Human (Homo sapiens) [TaxId: 9606]} Length = 208 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Ccg1/TafII250-interacting factor B (Cib) domain: Ccg1/TafII250-interacting factor B (Cib) species: Human (Homo sapiens) [TaxId: 9606]
Score = 39.3 bits (90), Expect = 2e-04
Identities = 18/60 (30%), Positives = 27/60 (45%), Gaps = 3/60 (5%)
Query: 232 WDKPVLVAWGISDKYLPQSVAEEFQKGNPNVVKLQMIEGAGHMPQEDWPEKVVDGLRYFF 291
P L+ +G D + E K PN ++ +++GAGH D PE+ GL F
Sbjct: 149 VKTPALIVYGDQDPMGQ--TSFEHLKQLPNH-RVLIMKGAGHPCYLDKPEEWHTGLLDFL 205
|
| >d1l7aa_ c.69.1.25 (A:) Cephalosporin C deacetylase {Bacillus subtilis [TaxId: 1423]} Length = 318 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetyl xylan esterase-like domain: Cephalosporin C deacetylase species: Bacillus subtilis [TaxId: 1423]
Score = 47.1 bits (110), Expect = 8e-07
Identities = 30/273 (10%), Positives = 59/273 (21%), Gaps = 32/273 (11%)
Query: 23 WFVRETGSADSRLGTIVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKG 82
W+ IV HG + + M + G+ F G S+
Sbjct: 72 WYAVPDKEG--PHPAIVKYHGYNASYDGEIHEMVNWALHGYATFGMLVRGQQRSEDTSIS 129
Query: 83 YDDFDFTENEFHEELDKLLDVLEVKYPFFLVVQGFLVGSYGLTWALKNPSRISKLAILNS 142
V +L L
Sbjct: 130 PHGHALGWMTKGILDKDTYYYRGV----------YLDAVRALEVISSFDEVD-------- 171
Query: 143 PLTASSPLPGLFQQLRIPLLGEFTAQNAIMAERFIEAGSPYVLKLDKADVYRLPYLASSG 202
G T A +++ A + Y + +
Sbjct: 172 --------ETRIGVTGGSQGGGLTIAAAALSDIPKAAVADYPYLSNFERAIDVALEQPYL 223
Query: 203 PGFALLEAARKVNFKDISSRIGAGFSSGSW----DKPVLVAWGISDKYLPQSVAEEFQKG 258
+ + + + + F + PVL++ G+ DK P S
Sbjct: 224 EINSFFRRNGSPETEVQAMKTLSYFDIMNLADRVKVPVLMSIGLIDKVTPPSTVFAAYNH 283
Query: 259 NPNVVKLQMIEGAGHMPQEDWPEKVVDGLRYFF 291
+L++ GH + + + +
Sbjct: 284 LETKKELKVYRYFGHEYIPAFQTEKLAFFKQIL 316
|
| >d1ex9a_ c.69.1.18 (A:) Lipase {Pseudomonas aeruginosa [TaxId: 287]} Length = 285 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Bacterial lipase domain: Lipase species: Pseudomonas aeruginosa [TaxId: 287]
Score = 42.5 bits (99), Expect = 3e-05
Identities = 13/111 (11%), Positives = 34/111 (30%), Gaps = 17/111 (15%)
Query: 38 IVFLHGAPSHSYS-----YRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTENE 92
IV HG + + S + G + + S+ + +
Sbjct: 10 IVLAHGMLGFDNILGVDYWFGIPSALRRDGAQVYVTEVSQLDTSEVRGE----------Q 59
Query: 93 FHEELDKLLDVLEVKYPFFLVVQGFLVGSYGLTWALKNPSRISKLAILNSP 143
+++++++ + P ++ G A P I+ + +P
Sbjct: 60 LLQQVEEIVALSGQ--PKVNLIGHSHGGPTIRYVAAVRPDLIASATSVGAP 108
|
| >d1tcaa_ c.69.1.17 (A:) Triacylglycerol lipase {Yeast (Candida antarctica), form b [TaxId: 34362]} Length = 317 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Triacylglycerol lipase species: Yeast (Candida antarctica), form b [TaxId: 34362]
Score = 42.4 bits (99), Expect = 3e-05
Identities = 28/207 (13%), Positives = 56/207 (27%), Gaps = 22/207 (10%)
Query: 23 WFVRETGSADSRLGTIVFLHGAPSHSYS--YRNVMSQMSDAGFHCFAPDWLGFGFSDKPE 80
+ S+ S+ I+ + G + N + + G+ F +D
Sbjct: 21 TCQGASPSSVSK--PILLVPGTGTTGPQSFDSNWIPLSTQLGYTPCWISPPPFMLNDTQV 78
Query: 81 KGYDDFDFTENEFHEELDKLLDVLEVKYPFFLVV--QGFLVGSYGLTWALKNPSRISKLA 138
+ L ++ QG LV +GLT+ S++ +L
Sbjct: 79 --------NTEYMVNAITALYAGSGNN-KLPVLTWSQGGLVAQWGLTFFPSIRSKVDRLM 129
Query: 139 ILNSPLTASSPLPGLFQQL------RIPLLGEFTAQNAIMAERFIEAGSPYVLKLDKADV 192
+ L G L A+ + P D
Sbjct: 130 AFAPDYKG-TVLAGPLDALAVSAPSVWQQTTGSALTTALRNAGGLTQIVPTTNLYSATDE 188
Query: 193 YRLPYLASSGPGFALLEAARKVNFKDI 219
P +++S + L + V + +
Sbjct: 189 IVQPQVSNSPLDSSYLFNGKNVQAQAV 215
|
| >d1ufoa_ c.69.1.27 (A:) Hypothetical protein TT1662 {Thermus thermophilus [TaxId: 274]} Length = 238 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Hypothetical protein TT1662 domain: Hypothetical protein TT1662 species: Thermus thermophilus [TaxId: 274]
Score = 40.5 bits (93), Expect = 1e-04
Identities = 18/115 (15%), Positives = 39/115 (33%), Gaps = 6/115 (5%)
Query: 32 DSRLGTIVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTEN 91
++ ++ LHG ++ ++ GF A D G + P + E
Sbjct: 21 EAPKALLLALHGLQGSKEHILALLPGYAERGFLLLAFDAPRHGEREGPPPSSKSPRYVEE 80
Query: 92 EFH------EELDKLLDVLEVKYPFFLVVQGFLVGSYGLTWALKNPSRISKLAIL 140
+ EE ++ + E ++ L + G +G++ L R +
Sbjct: 81 VYRVALGFKEEARRVAEEAERRFGLPLFLAGGSLGAFVAHLLLAEGFRPRGVLAF 135
|
| >d1xkta_ c.69.1.22 (A:) Fatty acid synthase {Human (Homo sapiens) [TaxId: 9606]} Length = 286 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterase domain of polypeptide, polyketide and fatty acid synthases domain: Fatty acid synthase species: Human (Homo sapiens) [TaxId: 9606]
Score = 40.1 bits (92), Expect = 2e-04
Identities = 26/280 (9%), Positives = 62/280 (22%), Gaps = 36/280 (12%)
Query: 29 GSADSRLGTIVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDF 88
S S + +H + + ++ S++ + D +
Sbjct: 19 NSVQSSERPLFLVHPIEGSTTVFHSLASRL---SIPTYGLQCTRAAPLDSIHSLAAYYID 75
Query: 89 TENEFHEELDKLLDVLEVKYPFFLVVQGFLVGSYGLTWALKNPSRISKLAILNSPLTASS 148
+ + P+ + + + ++ S NS
Sbjct: 76 CIRQVQP-----------EGPYRVAGYSYG-ACVAFEMCSQLQAQQSPAPTHNSLFLFDG 123
Query: 149 PLPGLFQQLRIPLLGEFTAQNAIMAERFIEAGSPYVLKLDKADVYR--LPYLASSGPGFA 206
+ + A I ++ V LP A
Sbjct: 124 SPTYVLAYTQSYRAKLTPGCEAEAETEAICFFVQQFTDMEHNRVLEALLPLKGLEERVAA 183
Query: 207 LLEAARKVNF---KDISSRIGAGFSSGSW-------------DKPVLVAWGISDKYLPQS 250
++ K + + S F + +L A
Sbjct: 184 AVDLIIKSHQGLDRQELSFAARSFYYKLRAAEQYTPKAKYYGNVMLLRAKTGGAYGEDLG 243
Query: 251 VAEEFQKGNPNVVKLQMIEGAGH--MPQEDWPEKVVDGLR 288
+ V + +IEG H + + E ++ +
Sbjct: 244 ADYNLSQVCDGKVSVHVIEG-DHRTLLEGSGLESIISIIH 282
|
| >d2dsta1 c.69.1.39 (A:2-123) Hypothetical protein TTHA1544 {Thermus thermophilus [TaxId: 274]} Length = 122 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: TTHA1544-like domain: Hypothetical protein TTHA1544 species: Thermus thermophilus [TaxId: 274]
Score = 36.3 bits (83), Expect = 0.001
Identities = 16/135 (11%), Positives = 39/135 (28%), Gaps = 21/135 (15%)
Query: 14 SYIKSGEYRWFVRETGSADSRLGTIVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGF 73
Y+ G ++ + + + G+ + D G+
Sbjct: 4 GYLHLYGLNLVFDRVGKGP----PVLLVA-------EEASRWPEALPEGYAFYLLDLPGY 52
Query: 74 GFSDKPEKGYDDFDFTENEFHEELDKLLDVLEVKYPFFLVV-QGFLVGSY--GLTWALKN 130
G ++ P E + ++ + P+ L+ G +G + L
Sbjct: 53 GRTEGPRMAP-------EELAHFVAGFAVMMNLGAPWVLLRGLGLALGPHLEALGLRALP 105
Query: 131 PSRISKLAILNSPLT 145
+ +L+S L+
Sbjct: 106 AEGVEVAEVLSSKLS 120
|
| >d1uxoa_ c.69.1.31 (A:) Hypothetical protein YdeN {Bacillus subtilis [TaxId: 1423]} Length = 186 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: YdeN-like domain: Hypothetical protein YdeN species: Bacillus subtilis [TaxId: 1423]
Score = 36.2 bits (82), Expect = 0.002
Identities = 4/42 (9%), Positives = 13/42 (30%), Gaps = 2/42 (4%)
Query: 37 TIVFLHGAPSHSYS--YRNVMSQMSDAGFHCFAPDWLGFGFS 76
+ +HG + S + + + ++ G +
Sbjct: 3 QVYIIHGYRASSTNHWFPWLKKRLLADGVQADILNMPNPLQP 44
|
| >d3b5ea1 c.69.1.14 (A:7-215) Uncharacterized protein Mll8374 {Mesorhizobium loti [TaxId: 381]} Length = 209 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase/thioesterase 1 domain: Uncharacterized protein Mll8374 species: Mesorhizobium loti [TaxId: 381]
Score = 36.2 bits (82), Expect = 0.002
Identities = 19/174 (10%), Positives = 42/174 (24%), Gaps = 14/174 (8%)
Query: 26 RETGSADSRLGTIVFLHGAPSHSYSYRNVMSQMSDAG--FHCFAPDWLGFGFSDKPEKGY 83
R G+ + LHG+ + + +++ GF
Sbjct: 14 RLLGAGKESRECLFLLHGSGVDETTLVPLARRIAPTATLVAARGRIPQEDGFRWFERIDP 73
Query: 84 DDFDFTENEFH-EELDKLLDVLEVKYPFF---LVVQGFLVGSY-GLTWALKNPSRISKLA 138
F+ + ++ G+ G+ + L +P + A
Sbjct: 74 TRFEQKSILAETAAFAAFTNEAAKRHGLNLDHATFLGYSNGANLVSSLMLLHPGIVRL-A 132
Query: 139 ILNSPLTASSPLPGLFQQLRIPLLGEFTAQNAI------MAERFIEAGSPYVLK 186
L P+ +P L+ A + G+ +
Sbjct: 133 ALLRPMPVLDHVPATDLAGIRTLIIAGAADETYGPFVPALVTLLSRHGAEVDAR 186
|
| >d1vlqa_ c.69.1.25 (A:) Acetyl xylan esterase TM0077 {Thermotoga maritima [TaxId: 2336]} Length = 322 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetyl xylan esterase-like domain: Acetyl xylan esterase TM0077 species: Thermotoga maritima [TaxId: 2336]
Score = 36.2 bits (82), Expect = 0.003
Identities = 29/272 (10%), Positives = 62/272 (22%), Gaps = 24/272 (8%)
Query: 23 WFVRETGSADSRLGTIVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKG 82
W + + +L +V G + + G+ CF D G G
Sbjct: 71 WLLVPKL-EEEKLPCVVQYIGYN-GGRGFPHDWLFWPSMGYICFVMDTRGQGSGWLKGDT 128
Query: 83 YDDFDFTENEFHEELDKLLDVLEVKYPFFLVVQGFLVGSYGLTWALKNPSRISKLAILNS 142
D + + + + Y + V + + A P
Sbjct: 129 PDYPEGPVDPQYPGFMTRGILDPRTYYYRRVFTDAV---RAVEAAASFPQVD-------- 177
Query: 143 PLTASSPLPGLFQQLRIPLLGEFTAQNAIMAERFIEAGSPYVLKLDKADVYRL--PYLAS 200
G + ++++ +L + +
Sbjct: 178 --------QERIVIAGGSQGGGIALAVSALSKKAKALLCDVPFLCHFRRAVQLVDTHPYA 229
Query: 201 SGPGFALLEAARKVNFKDISSRIGAGFSSGSWDKPVLVAWGISDKYLPQSVAEEFQKGNP 260
F ++ S + P L + G+ D P S
Sbjct: 230 EITNFLKTHRDKEEIVFRTLSYFDGVNFAARAKIPALFSVGLMDNICPPSTVFAAYNYYA 289
Query: 261 NVVKLQMIEGAGH-MPQEDWPEKVVDGLRYFF 291
++++ H + V L+ F
Sbjct: 290 GPKEIRIYPYNNHEGGGSFQAVEQVKFLKKLF 321
|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 295 | |||
| d1j1ia_ | 268 | Meta cleavage compound hydrolase CarC {Janthinobac | 100.0 | |
| d1uk8a_ | 271 | Meta-cleavage product hydrolase CumD {Pseudomonas | 100.0 | |
| d1bn7a_ | 291 | Haloalkane dehalogenase {Rhodococcus sp. [TaxId: 1 | 100.0 | |
| d1q0ra_ | 297 | Aclacinomycin methylesterase RdmC {Streptomyces pu | 100.0 | |
| d1b6ga_ | 310 | Haloalkane dehalogenase {Xanthobacter autotrophicu | 100.0 | |
| d1c4xa_ | 281 | 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolas | 100.0 | |
| d1zd3a2 | 322 | Mammalian epoxide hydrolase, C-terminal domain {Hu | 100.0 | |
| d1a88a_ | 275 | Chloroperoxidase L {Streptomyces lividans [TaxId: | 100.0 | |
| d1mtza_ | 290 | Tricorn interacting factor F1 {Archaeon Thermoplas | 100.0 | |
| d1va4a_ | 271 | Arylesterase {Pseudomonas fluorescens [TaxId: 294] | 100.0 | |
| d1a8sa_ | 273 | Chloroperoxidase F {Pseudomonas fluorescens [TaxId | 100.0 | |
| d1ehya_ | 293 | Bacterial epoxide hydrolase {Agrobacterium radioba | 100.0 | |
| d2rhwa1 | 283 | 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolas | 100.0 | |
| d1hkha_ | 279 | Gamma-lactamase {Aureobacterium sp. [TaxId: 51671] | 100.0 | |
| d1a8qa_ | 274 | Bromoperoxidase A1 {Streptomyces aureofaciens [Tax | 100.0 | |
| d1brta_ | 277 | Bromoperoxidase A2 {Streptomyces aureofaciens [Tax | 100.0 | |
| d1imja_ | 208 | Ccg1/TafII250-interacting factor B (Cib) {Human (H | 100.0 | |
| d1azwa_ | 313 | Proline iminopeptidase {Xanthomonas campestris, pv | 100.0 | |
| d3c70a1 | 256 | Hydroxynitrile lyase {Rubber tree (Hevea brasilien | 100.0 | |
| d1xkla_ | 258 | Salicylic acid-binding protein 2 (SABP2) {Common t | 100.0 | |
| d1mj5a_ | 298 | Haloalkane dehalogenase {Sphingomonas paucimobilis | 100.0 | |
| d1m33a_ | 256 | Biotin biosynthesis protein BioH {Escherichia coli | 100.0 | |
| d1qo7a_ | 394 | Bacterial epoxide hydrolase {Aspergillus niger [Ta | 100.0 | |
| d1wm1a_ | 313 | Proline aminopeptidase {Serratia marcescens [TaxId | 99.98 | |
| d1r3da_ | 264 | Hypothetical protein VC1974 {Vibrio cholerae [TaxI | 99.96 | |
| d1k8qa_ | 377 | Gastric lipase {Dog (Canis familiaris) [TaxId: 961 | 99.95 | |
| d1pjaa_ | 268 | Palmitoyl protein thioesterase 2 {Human (Homo sapi | 99.94 | |
| d1tqha_ | 242 | Carboxylesterase Est {Bacillus stearothermophilus | 99.94 | |
| d1thta_ | 302 | Myristoyl-ACP-specific thioesterase {Vibrio harvey | 99.91 | |
| d1l7aa_ | 318 | Cephalosporin C deacetylase {Bacillus subtilis [Ta | 99.85 | |
| d1xkta_ | 286 | Fatty acid synthase {Human (Homo sapiens) [TaxId: | 99.85 | |
| d2h7xa1 | 283 | Picromycin polyketide synthase {Streptomyces venez | 99.84 | |
| d1jmkc_ | 230 | Surfactin synthetase, SrfA {Bacillus subtilis [Tax | 99.84 | |
| d1uxoa_ | 186 | Hypothetical protein YdeN {Bacillus subtilis [TaxI | 99.83 | |
| d2dsta1 | 122 | Hypothetical protein TTHA1544 {Thermus thermophilu | 99.83 | |
| d2jbwa1 | 360 | 2,6-dihydropseudooxynicotine hydrolase {Arthrobact | 99.83 | |
| d2fuka1 | 218 | XC6422 protein {Xanthomonas campestris [TaxId: 339 | 99.82 | |
| d1ufoa_ | 238 | Hypothetical protein TT1662 {Thermus thermophilus | 99.82 | |
| d1ispa_ | 179 | Lipase A {Bacillus subtilis [TaxId: 1423]} | 99.81 | |
| d1qlwa_ | 318 | A novel bacterial esterase {Alcaligenes sp. [TaxId | 99.8 | |
| d2vata1 | 376 | Acetyl-CoA:deacetylcephalosporin C acetyltransfera | 99.78 | |
| d2hu7a2 | 260 | Acylamino-acid-releasing enzyme, C-terminal donain | 99.76 | |
| d2b61a1 | 357 | Homoserine O-acetyltransferase {Haemophilus influe | 99.75 | |
| d2pl5a1 | 362 | Homoserine O-acetyltransferase {Leptospira interro | 99.74 | |
| d1vlqa_ | 322 | Acetyl xylan esterase TM0077 {Thermotoga maritima | 99.71 | |
| d1mo2a_ | 255 | Erythromycin polyketide synthase {Saccharopolyspor | 99.68 | |
| d1cvla_ | 319 | Lipase {Chromobacterium viscosum [TaxId: 42739]} | 99.64 | |
| d1jfra_ | 260 | Lipase {Streptomyces exfoliatus [TaxId: 1905]} | 99.63 | |
| d2i3da1 | 218 | Hypothetical protein Atu1826 {Agrobacterium tumefa | 99.63 | |
| d3b5ea1 | 209 | Uncharacterized protein Mll8374 {Mesorhizobium lot | 99.59 | |
| d1fj2a_ | 229 | Acyl protein thioesterase 1 {Human (Homo sapiens) | 99.56 | |
| d2bgra2 | 258 | Dipeptidyl peptidase IV/CD26, C-terminal domain {P | 99.53 | |
| d1ex9a_ | 285 | Lipase {Pseudomonas aeruginosa [TaxId: 287]} | 99.52 | |
| d2h1ia1 | 202 | Carboxylesterase {Bacillus cereus [TaxId: 1396]} | 99.5 | |
| d2r8ba1 | 203 | Uncharacterized protein Atu2452 {Agrobacterium tum | 99.5 | |
| d1dina_ | 233 | Dienelactone hydrolase {Pseudomonas sp., B13 [TaxI | 99.44 | |
| d1xfda2 | 258 | Dipeptidyl aminopeptidase-like protein 6, DPP6, C- | 99.44 | |
| d1tcaa_ | 317 | Triacylglycerol lipase {Yeast (Candida antarctica) | 99.35 | |
| d1vkha_ | 263 | Putative serine hydrolase Ydr428c {Baker's yeast ( | 99.32 | |
| d1auoa_ | 218 | Carboxylesterase {Pseudomonas fluorescens [TaxId: | 99.22 | |
| d2pbla1 | 261 | Uncharacterized protein TM1040_2492 {Silicibacter | 99.15 | |
| d1ju3a2 | 347 | Bacterial cocaine esterase N-terminal domain {Rhod | 99.07 | |
| d1qfma2 | 280 | Prolyl oligopeptidase, C-terminal domain {Pig (Sus | 99.02 | |
| d1jjia_ | 311 | Carboxylesterase {Archaeon Archaeoglobus fulgidus | 99.0 | |
| d1lzla_ | 317 | Heroin esterase {Rhodococcus sp. [TaxId: 1831]} | 98.91 | |
| d1jkma_ | 358 | Carboxylesterase {Bacillus subtilis, brefeldin A e | 98.85 | |
| d1lnsa3 | 405 | X-Prolyl dipeptidyl aminopeptidase PepX, middle do | 98.79 | |
| d1mpxa2 | 381 | Alpha-amino acid ester hydrolase {Xanthomonas citr | 98.68 | |
| d1u4na_ | 308 | Carboxylesterase {Alicyclobacillus acidocaldarius | 98.63 | |
| d1ei9a_ | 279 | Palmitoyl protein thioesterase 1 {Cow (Bos taurus) | 98.54 | |
| g1wht.1 | 409 | Serine carboxypeptidase II {Wheat (Triticum vulgar | 98.44 | |
| d1jjfa_ | 255 | Feruloyl esterase domain of the cellulosomal xylan | 98.4 | |
| d1wpxa1 | 421 | Serine carboxypeptidase II {Baker's yeast (Sacchar | 98.38 | |
| d1ivya_ | 452 | Human 'protective protein', HPP {Human (Homo sapie | 98.34 | |
| d1r88a_ | 267 | Antigen pt51/mpb51 {Mycobacterium tuberculosis [Ta | 98.27 | |
| d1rp1a2 | 337 | Pancreatic lipase, N-terminal domain {Dog (Canis f | 98.17 | |
| d3c8da2 | 246 | Enterochelin esterase, catalytic domain {Shigella | 98.06 | |
| d1dqza_ | 280 | Antigen 85c {Mycobacterium tuberculosis [TaxId: 17 | 97.99 | |
| d2b9va2 | 385 | Alpha-amino acid ester hydrolase {Acetobacter past | 97.97 | |
| d1ku0a_ | 388 | Lipase L1 {Bacillus stearothermophilus [TaxId: 142 | 97.93 | |
| d1bu8a2 | 338 | Pancreatic lipase, N-terminal domain {Rat (Rattus | 97.92 | |
| d1sfra_ | 288 | Antigen 85a {Mycobacterium tuberculosis [TaxId: 17 | 97.89 | |
| d1pv1a_ | 299 | Hypothetical esterase YJL068C {Baker's yeast (Sacc | 97.64 | |
| d2gzsa1 | 265 | Enterobactin and salmochelin hydrolase IroE {Esche | 97.59 | |
| d1wb4a1 | 273 | Feruloyl esterase domain of the cellulosomal xylan | 97.29 | |
| d2d81a1 | 318 | Polyhydroxybutyrate depolymerase {Penicillium funi | 97.0 | |
| g1gxs.1 | 425 | Hydroxynitrile lyase {Sorghum (Sorghum bicolor) [T | 96.52 | |
| d1ac5a_ | 483 | Serine carboxypeptidase II {Baker's yeast (Sacchar | 96.1 | |
| d1qe3a_ | 483 | Thermophilic para-nitrobenzyl esterase (PNB estera | 95.27 | |
| g1gxs.1 | 425 | Hydroxynitrile lyase {Sorghum (Sorghum bicolor) [T | 94.89 | |
| d2ha2a1 | 542 | Acetylcholinesterase {Mouse (Mus musculus) [TaxId: | 94.6 | |
| d2h7ca1 | 532 | Mammalian carboxylesterase (liver carboxylesterase | 94.57 | |
| d1ea5a_ | 532 | Acetylcholinesterase {Pacific electric ray (Torped | 94.36 | |
| d1thga_ | 544 | Type-B carboxylesterase/lipase {Fungus (Geotrichum | 93.6 | |
| d1p0ia_ | 526 | Butyryl cholinesterase {Human (Homo sapiens) [TaxI | 93.47 | |
| d1ukca_ | 517 | Esterase EstA {Aspergillus niger [TaxId: 5061]} | 91.19 | |
| d2bcea_ | 579 | Bile-salt activated lipase (cholesterol esterase) | 89.91 | |
| d1dx4a_ | 571 | Acetylcholinesterase {Fruit fly (Drosophila melano | 89.6 | |
| d1llfa_ | 534 | Type-B carboxylesterase/lipase {Candida cylindrace | 89.48 | |
| d1ac5a_ | 483 | Serine carboxypeptidase II {Baker's yeast (Sacchar | 85.7 |
| >d1j1ia_ c.69.1.10 (A:) Meta cleavage compound hydrolase CarC {Janthinobacterium sp. J3 [TaxId: 213804]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carbon-carbon bond hydrolase domain: Meta cleavage compound hydrolase CarC species: Janthinobacterium sp. J3 [TaxId: 213804]
Probab=100.00 E-value=7.4e-37 Score=256.88 Aligned_cols=258 Identities=18% Similarity=0.240 Sum_probs=167.5
Q ss_pred cceeeEEeCcEEEEEEEcCCCCCCCceEEEEcCCCCCCc---cchhhHHHhhhCCCeEEEeCCCCCCCCCCCCCCCCCCC
Q 022534 11 EYGSYIKSGEYRWFVRETGSADSRLGTIVFLHGAPSHSY---SYRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFD 87 (295)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~g~~~~~~~~vv~lHG~~~~~~---~w~~~~~~l~~~~~~via~Dl~G~G~S~~~~~~~~~~~ 87 (295)
++..|++++|.++||.+.|++ |||||+||++++.. .|..+++.|++ +|+|+++|+||||.|+.+.. .
T Consensus 2 ~~~~~~~~dg~~l~y~~~G~g----~~vvllHG~~~~~~~~~~~~~~~~~l~~-~~~v~~~D~~G~G~S~~~~~-----~ 71 (268)
T d1j1ia_ 2 YVERFVNAGGVETRYLEAGKG----QPVILIHGGGAGAESEGNWRNVIPILAR-HYRVIAMDMLGFGKTAKPDI-----E 71 (268)
T ss_dssp CEEEEEEETTEEEEEEEECCS----SEEEEECCCSTTCCHHHHHTTTHHHHTT-TSEEEEECCTTSTTSCCCSS-----C
T ss_pred CcCeEEEECCEEEEEEEEcCC----CeEEEECCCCCCccHHHHHHHHHHHHhc-CCEEEEEcccccccccCCcc-----c
Confidence 467899999999999999964 48999999987554 58889999975 89999999999999997543 3
Q ss_pred CCHHHHHHHHHHHHHHhCCCCceEEEEecccch-HHHHHHHHhCcCccceeEEEcCCCCCCCCCchhhhhhhcccchhhh
Q 022534 88 FTENEFHEELDKLLDVLEVKYPFFLVVQGFLVG-SYGLTWALKNPSRISKLAILNSPLTASSPLPGLFQQLRIPLLGEFT 166 (295)
Q Consensus 88 ~~~~~~~~~l~~~~~~l~~~~~~~lv~~G~~~G-~~~~~~a~~~p~~v~~lil~~~p~~~~~~~~~~~~~~~~~~~~~~~ 166 (295)
++.+++++++.+++++++.+++++++ |||+| .+++.+|.++|++|+++|+++++......................
T Consensus 72 ~~~~~~~~~~~~~i~~l~~~~~~~li--G~S~Gg~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~- 148 (268)
T d1j1ia_ 72 YTQDRRIRHLHDFIKAMNFDGKVSIV--GNSMGGATGLGVSVLHSELVNALVLMGSAGLVVEIHEDLRPIINYDFTREG- 148 (268)
T ss_dssp CCHHHHHHHHHHHHHHSCCSSCEEEE--EEHHHHHHHHHHHHHCGGGEEEEEEESCCBCCCC----------CCSCHHH-
T ss_pred cccccccccchhhHHHhhhcccceee--eccccccccchhhccChHhhheeeecCCCccccccchhhhhhhhhhhhhhh-
Confidence 47789999999999999987777777 66665 568889999999999999997643322111111000000000000
Q ss_pred hhhHHHHHHHHHhCCCccccccccccccccccccCCchhHH---HHHHHhc-chhhhhHhhhcCcCCCCCCCcEEEEEeC
Q 022534 167 AQNAIMAERFIEAGSPYVLKLDKADVYRLPYLASSGPGFAL---LEAARKV-NFKDISSRIGAGFSSGSWDKPVLVAWGI 242 (295)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~-~~~~~~~~~~~~~~~~~~~~P~l~i~G~ 242 (295)
.......+....... .......... ........... ....... ........ .+++++|+++|+|+
T Consensus 149 --~~~~~~~~~~~~~~~-~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------l~~i~~P~l~i~G~ 217 (268)
T d1j1ia_ 149 --MVHLVKALTNDGFKI-DDAMINSRYT--YATDEATRKAYVATMQWIREQGGLFYDPEF------IRKVQVPTLVVQGK 217 (268)
T ss_dssp --HHHHHHHHSCTTCCC-CHHHHHHHHH--HHHSHHHHHHHHHHHHHHHHHTSSBCCHHH------HTTCCSCEEEEEET
T ss_pred --hHHHHHHHhhhhhhh-hhhhhHHHHH--hhhhhhhhhhhhhhhhhhhccccccchhhh------HhhCCCCEEEEEeC
Confidence 000000110000000 0000000000 00000000000 0000000 00000111 13679999999999
Q ss_pred CCCCCCcchHHHHHhcCCCCeEEEEecCCCCCCCCCChHHHHHHHHHHHHh
Q 022534 243 SDKYLPQSVAEEFQKGNPNVVKLQMIEGAGHMPQEDWPEKVVDGLRYFFLN 293 (295)
Q Consensus 243 ~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 293 (295)
+|.+++++.+..+.+.+++ +++++++++||++++|+|++|++.|++||..
T Consensus 218 ~D~~~~~~~~~~~~~~~~~-~~~~~~~~~gH~~~~e~p~~~~~~i~~FL~~ 267 (268)
T d1j1ia_ 218 DDKVVPVETAYKFLDLIDD-SWGYIIPHCGHWAMIEHPEDFANATLSFLSL 267 (268)
T ss_dssp TCSSSCHHHHHHHHHHCTT-EEEEEESSCCSCHHHHSHHHHHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHhCCC-CEEEEECCCCCchHHhCHHHHHHHHHHHHcC
Confidence 9999999999999999997 7999999999999999999999999999975
|
| >d1uk8a_ c.69.1.10 (A:) Meta-cleavage product hydrolase CumD {Pseudomonas fluorescens [TaxId: 294]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carbon-carbon bond hydrolase domain: Meta-cleavage product hydrolase CumD species: Pseudomonas fluorescens [TaxId: 294]
Probab=100.00 E-value=2.9e-36 Score=253.61 Aligned_cols=255 Identities=19% Similarity=0.330 Sum_probs=169.5
Q ss_pred cccceeeEEeCcEEEEEEEcCCCCCCCceEEEEcCCCCCCcc---chhhHHHhhhCCCeEEEeCCCCCCCCCCCCCCCCC
Q 022534 9 GREYGSYIKSGEYRWFVRETGSADSRLGTIVFLHGAPSHSYS---YRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDD 85 (295)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~vv~lHG~~~~~~~---w~~~~~~l~~~~~~via~Dl~G~G~S~~~~~~~~~ 85 (295)
+-|||++++++|+++||.+.|++ ||||||||++++... |..+++.|++ +|+|+++|+||||.|+.+...
T Consensus 1 ~~~~~~~i~~~G~~~~Y~~~G~G----~pvvllHG~~~~~~~~~~~~~~~~~l~~-~~~vi~~Dl~G~G~S~~~~~~--- 72 (271)
T d1uk8a_ 1 NLEIGKSILAAGVLTNYHDVGEG----QPVILIHGSGPGVSAYANWRLTIPALSK-FYRVIAPDMVGFGFTDRPENY--- 72 (271)
T ss_dssp CTTCCEEEEETTEEEEEEEECCS----SEEEEECCCSTTCCHHHHHTTTHHHHTT-TSEEEEECCTTSTTSCCCTTC---
T ss_pred CCCCCCEEEECCEEEEEEEEeeC----CeEEEECCCCCCccHHHHHHHHHHHHhC-CCEEEEEeCCCCCCccccccc---
Confidence 35899999999999999999964 489999999876544 6788898975 899999999999999976432
Q ss_pred CCCCHHHHHHHHHHHHHHhCCCCceEEEEecccch-HHHHHHHHhCcCccceeEEEcCCCCCCCCCchhhhhhh-cccch
Q 022534 86 FDFTENEFHEELDKLLDVLEVKYPFFLVVQGFLVG-SYGLTWALKNPSRISKLAILNSPLTASSPLPGLFQQLR-IPLLG 163 (295)
Q Consensus 86 ~~~~~~~~~~~l~~~~~~l~~~~~~~lv~~G~~~G-~~~~~~a~~~p~~v~~lil~~~p~~~~~~~~~~~~~~~-~~~~~ 163 (295)
.++.++++.++..++++++.++ ++++ |||+| .+++.+|.++|++++++++++++............... .+...
T Consensus 73 -~~~~~~~~~~~~~~~~~l~~~~-~~lv--G~S~Gg~ia~~~a~~~p~~~~~lil~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (271)
T d1uk8a_ 73 -NYSKDSWVDHIIGIMDALEIEK-AHIV--GNAFGGGLAIATALRYSERVDRMVLMGAAGTRFDVTEGLNAVWGYTPSIE 148 (271)
T ss_dssp -CCCHHHHHHHHHHHHHHTTCCS-EEEE--EETHHHHHHHHHHHHCGGGEEEEEEESCCCSCCCCCHHHHHHHTCCSCHH
T ss_pred -cccccccchhhhhhhhhhcCCC-ceEe--eccccceeehHHHHhhhccchheeecccCCCcccchhhhhhhhhccchhH
Confidence 3478899999999999999885 6676 66765 57888999999999999998765433222111110000 00000
Q ss_pred hhhhhhHHHHHHHHHhCCCccccccccc-ccc---cc-----ccc-cCCchhHHHHHHHhcchhhhhHhhhcCcCCCCCC
Q 022534 164 EFTAQNAIMAERFIEAGSPYVLKLDKAD-VYR---LP-----YLA-SSGPGFALLEAARKVNFKDISSRIGAGFSSGSWD 233 (295)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~---~~-----~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (295)
.. ......+. ..+......... .+. .+ +.. ............ . ..... .++++
T Consensus 149 ~~----~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~---~~~~~------l~~i~ 211 (271)
T d1uk8a_ 149 NM----RNLLDIFA--YDRSLVTDELARLRYEASIQPGFQESFSSMFPEPRQRWIDAL--A---SSDED------IKTLP 211 (271)
T ss_dssp HH----HHHHHHHC--SCGGGCCHHHHHHHHHHHTSTTHHHHHHTTSCSSTHHHHHHH--C---CCHHH------HTTCC
T ss_pred HH----HHHHHHHh--hhcccchhHHHHHHHhhhhchhHHHHHHhhcchhhhhhhhhc--c---ccHHH------HHhhc
Confidence 00 00000000 000000000000 000 00 000 000000000000 0 00111 13678
Q ss_pred CcEEEEEeCCCCCCCcchHHHHHhcCCCCeEEEEecCCCCCCCCCChHHHHHHHHHHHHh
Q 022534 234 KPVLVAWGISDKYLPQSVAEEFQKGNPNVVKLQMIEGAGHMPQEDWPEKVVDGLRYFFLN 293 (295)
Q Consensus 234 ~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 293 (295)
+|+|+|+|++|++++++.+..+.+.+++ +++++++++||++++|+|++|++.|++||++
T Consensus 212 ~P~lii~G~~D~~~~~~~~~~~~~~~~~-~~~~~~~~~gH~~~~e~p~~~~~~i~~Fl~e 270 (271)
T d1uk8a_ 212 NETLIIHGREDQVVPLSSSLRLGELIDR-AQLHVFGRCGHWTQIEQTDRFNRLVVEFFNE 270 (271)
T ss_dssp SCEEEEEETTCSSSCHHHHHHHHHHCTT-EEEEEESSCCSCHHHHTHHHHHHHHHHHHHT
T ss_pred cceeEEecCCCCCcCHHHHHHHHHhCCC-CEEEEECCCCCchHHHCHHHHHHHHHHHHhc
Confidence 9999999999999999999999999997 7999999999999999999999999999974
|
| >d1bn7a_ c.69.1.8 (A:) Haloalkane dehalogenase {Rhodococcus sp. [TaxId: 1831]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloalkane dehalogenase domain: Haloalkane dehalogenase species: Rhodococcus sp. [TaxId: 1831]
Probab=100.00 E-value=2e-36 Score=256.99 Aligned_cols=273 Identities=23% Similarity=0.343 Sum_probs=176.2
Q ss_pred cccccceeeEEeCcEEEEEEEcCCCCCCCceEEEEcCCCCCCccchhhHHHhhhCCCeEEEeCCCCCCCCCCCCCCCCCC
Q 022534 7 NKGREYGSYIKSGEYRWFVRETGSADSRLGTIVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDF 86 (295)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~vv~lHG~~~~~~~w~~~~~~l~~~~~~via~Dl~G~G~S~~~~~~~~~~ 86 (295)
..+|..+.|++++|.++||.+.|+++ +|+|||+||+++++..|..+++.|++ +|+|+++|+||||+|+++..
T Consensus 3 ~~~p~~~~~i~~~g~~i~y~~~G~~~--~p~lvllHG~~~~~~~~~~~~~~L~~-~~~vi~~d~~G~G~S~~~~~----- 74 (291)
T d1bn7a_ 3 TGFPFDPHYVEVLGERMHYVDVGPRD--GTPVLFLHGNPTSSYLWRNIIPHVAP-SHRCIAPDLIGMGKSDKPDL----- 74 (291)
T ss_dssp CCCCCCCEEEEETTEEEEEEEESCSS--SSCEEEECCTTCCGGGGTTTHHHHTT-TSCEEEECCTTSTTSCCCSC-----
T ss_pred CCCCCCCeEEEECCEEEEEEEeCCCC--CCeEEEECCCCCCHHHHHHHHHHHhc-CCEEEEEeCCCCcccccccc-----
Confidence 35678889999999999999999654 46999999999999999999999975 89999999999999997643
Q ss_pred CCCHHHHHHHHHHHHHHhCCCCceEEEEecccch-HHHHHHHHhCcCccceeEEEcCCCCCCCC--Cchhhhhh----hc
Q 022534 87 DFTENEFHEELDKLLDVLEVKYPFFLVVQGFLVG-SYGLTWALKNPSRISKLAILNSPLTASSP--LPGLFQQL----RI 159 (295)
Q Consensus 87 ~~~~~~~~~~l~~~~~~l~~~~~~~lv~~G~~~G-~~~~~~a~~~p~~v~~lil~~~p~~~~~~--~~~~~~~~----~~ 159 (295)
.++.+++++++.++++++++++ ++++ |||+| .+++.+|.++|++++++++++++...... .+...... ..
T Consensus 75 ~~~~~~~~~~l~~~l~~l~~~~-~~lv--GhS~Gg~ia~~~a~~~p~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (291)
T d1bn7a_ 75 DYFFDDHVRYLDAFIEALGLEE-VVLV--IHDWGSALGFHWAKRNPERVKGIACMEFIRPIPTWDEWPEFARETFQAFRT 151 (291)
T ss_dssp CCCHHHHHHHHHHHHHHTTCCS-EEEE--EEHHHHHHHHHHHHHCGGGEEEEEEEEECCCBCSGGGSCHHHHHHHHHHTS
T ss_pred ccchhHHHHHHhhhhhhhcccc-cccc--ccccccchhHHHHHhCCcceeeeeeeccccCCccchhhhhhhhhHHHHHhh
Confidence 4588999999999999999875 6666 77776 46888999999999999998654332211 11100000 00
Q ss_pred c-cchhhhhhhHHHHHHHHHhCCCccccccccccccccccccCCchhHHHHHHHhcch-------hhhhHhhhcCcCCCC
Q 022534 160 P-LLGEFTAQNAIMAERFIEAGSPYVLKLDKADVYRLPYLASSGPGFALLEAARKVNF-------KDISSRIGAGFSSGS 231 (295)
Q Consensus 160 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~ 231 (295)
. ..............................+.+...... ................ .......... ..+
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~ 228 (291)
T d1bn7a_ 152 ADVGRELIIDQNAFIEGVLPKCVVRPLTEVEMDHYREPFLK-PVDREPLWRFPNEIPIAGEPANIVALVEAYMNW--LHQ 228 (291)
T ss_dssp TTHHHHHHTTSCHHHHTHHHHTCSSCCCHHHHHHHHGGGSS-GGGGHHHHHHHHHSCBTTBSHHHHHHHHHHHHH--HHH
T ss_pred hhhHHHhhhhhhhhHHhhhhhhccccchHHHHHHHHHHhcc-hhhhHHHHHHHHHhhhhhhhchhhhhhhhhhhh--hhc
Confidence 0 000000000000000000000000000000000000000 0000000110000000 0000000000 125
Q ss_pred CCCcEEEEEeCCCCCCCcchHHHHHhcCCCCeEEEEecCCCCCCCCCChHHHHHHHHHHHHhc
Q 022534 232 WDKPVLVAWGISDKYLPQSVAEEFQKGNPNVVKLQMIEGAGHMPQEDWPEKVVDGLRYFFLNY 294 (295)
Q Consensus 232 ~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~ 294 (295)
+++|+++|+|++|.+++++.++++++.+++ +++++++++||++++|+|++|++.|.+||+++
T Consensus 229 i~~P~lii~G~~D~~~~~~~~~~~~~~~~~-~~~~~i~~~gH~~~~e~p~~v~~~i~~fL~~l 290 (291)
T d1bn7a_ 229 SPVPKLLFWGTPGVLIPPAEAARLAESLPN-CKTVDIGPGLHYLQEDNPDLIGSEIARWLPGL 290 (291)
T ss_dssp CCSCEEEEEEEECSSSCHHHHHHHHHHSTT-EEEEEEEEESSCGGGTCHHHHHHHHHHHSGGG
T ss_pred CCCCEEEEEeCCCCCcCHHHHHHHHHHCCC-CEEEEECCCCCchHHhCHHHHHHHHHHHHHhh
Confidence 689999999999999999999999999987 89999999999999999999999999999875
|
| >d1q0ra_ c.69.1.28 (A:) Aclacinomycin methylesterase RdmC {Streptomyces purpurascens [TaxId: 1924]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Aclacinomycin methylesterase RdmC domain: Aclacinomycin methylesterase RdmC species: Streptomyces purpurascens [TaxId: 1924]
Probab=100.00 E-value=8.4e-36 Score=254.25 Aligned_cols=265 Identities=17% Similarity=0.177 Sum_probs=168.8
Q ss_pred eeEEeCcEEEEEEEcCCCCCCCceEEEEcCCCCCCccch-hhHHHhhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCCHHH
Q 022534 14 SYIKSGEYRWFVRETGSADSRLGTIVFLHGAPSHSYSYR-NVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTENE 92 (295)
Q Consensus 14 ~~~~~~~~~~~~~~~g~~~~~~~~vv~lHG~~~~~~~w~-~~~~~l~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~ 92 (295)
..++++|+++||++.|+++ +|+|||+||+++++..|. .+++.|.++||+|+++|+||||+|+.+... ...|++++
T Consensus 3 ~~~~~g~~~i~y~~~G~~~--~p~vvl~HG~~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~--~~~~~~~~ 78 (297)
T d1q0ra_ 3 RIVPSGDVELWSDDFGDPA--DPALLLVMGGNLSALGWPDEFARRLADGGLHVIRYDHRDTGRSTTRDFA--AHPYGFGE 78 (297)
T ss_dssp EEEEETTEEEEEEEESCTT--SCEEEEECCTTCCGGGSCHHHHHHHHTTTCEEEEECCTTSTTSCCCCTT--TSCCCHHH
T ss_pred eEEEECCEEEEEEEecCCC--CCEEEEECCCCcChhHHHHHHHHHHHhCCCEEEEEeCCCCccccccccc--ccccccch
Confidence 4689999999999999754 479999999999999995 467788777999999999999999875432 33578999
Q ss_pred HHHHHHHHHHHhCCCCceEEEEecccch-HHHHHHHHhCcCccceeEEEcCCCCCCCCCchhhhh-hh-cccchhhh-hh
Q 022534 93 FHEELDKLLDVLEVKYPFFLVVQGFLVG-SYGLTWALKNPSRISKLAILNSPLTASSPLPGLFQQ-LR-IPLLGEFT-AQ 168 (295)
Q Consensus 93 ~~~~l~~~~~~l~~~~~~~lv~~G~~~G-~~~~~~a~~~p~~v~~lil~~~p~~~~~~~~~~~~~-~~-~~~~~~~~-~~ 168 (295)
+++|+..++++++.++ ++++ |||+| .+++.+|..+|++|+++++++++...... ...... .. .+...... ..
T Consensus 79 ~~~d~~~ll~~l~~~~-~~lv--GhS~Gg~~a~~~a~~~P~~v~~lvli~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 154 (297)
T d1q0ra_ 79 LAADAVAVLDGWGVDR-AHVV--GLSMGATITQVIALDHHDRLSSLTMLLGGGLDIDF-DANIERVMRGEPTLDGLPGPQ 154 (297)
T ss_dssp HHHHHHHHHHHTTCSS-EEEE--EETHHHHHHHHHHHHCGGGEEEEEEESCCCTTCCH-HHHHHHHHHTCCCSSCSCCCC
T ss_pred hhhhhccccccccccc-eeec--cccccchhhhhhhcccccceeeeEEEccccccccc-hhhhHHHhhhhhhhhhhhhhh
Confidence 9999999999999886 6666 67766 57888999999999999998654332111 100000 00 00000000 00
Q ss_pred hHHHHHHHHHhCCCcccccccc---cccc-ccccccCCchhHH---HHHH-Hh---c------------chhhhhHhhhc
Q 022534 169 NAIMAERFIEAGSPYVLKLDKA---DVYR-LPYLASSGPGFAL---LEAA-RK---V------------NFKDISSRIGA 225 (295)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~---~~~~-~~~~~~~~~~~~~---~~~~-~~---~------------~~~~~~~~~~~ 225 (295)
...................... .... ............. .... .. . ...+....
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 231 (297)
T d1q0ra_ 155 QPFLDALALMNQPAEGRAAEVAKRVSKWRILSGTGVPFDDAEYARWEERAIDHAGGVLAEPYAHYSLTLPPPSRAAE--- 231 (297)
T ss_dssp HHHHHHHHHHHSCCCSHHHHHHHHHHHHHHHHCSSSCCCHHHHHHHHHHHHHHTTTCCSCCCGGGGCCCCCGGGGGG---
T ss_pred HHHHHHHHHhccccchhhHHHHHHHHHHhhhccccccchHHHHHHHHHHhhhhccccchhhhhhhhhhhccccchhh---
Confidence 0000000000000000000000 0000 0000000000000 0000 00 0 00000011
Q ss_pred CcCCCCCCCcEEEEEeCCCCCCCcchHHHHHhcCCCCeEEEEecCCCCCCCCCChHHHHHHHHHHHHh
Q 022534 226 GFSSGSWDKPVLVAWGISDKYLPQSVAEEFQKGNPNVVKLQMIEGAGHMPQEDWPEKVVDGLRYFFLN 293 (295)
Q Consensus 226 ~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 293 (295)
.+++++|+++|+|++|++++++.++.+++.+|+ +++++++++||++++|+|+++++.|.+||++
T Consensus 232 ---l~~i~~Pvlvi~G~~D~~~~~~~~~~~~~~~p~-~~~~~i~~~gH~~~~e~p~~~~~~i~~~l~~ 295 (297)
T d1q0ra_ 232 ---LREVTVPTLVIQAEHDPIAPAPHGKHLAGLIPT-ARLAEIPGMGHALPSSVHGPLAEVILAHTRS 295 (297)
T ss_dssp ---GGGCCSCEEEEEETTCSSSCTTHHHHHHHTSTT-EEEEEETTCCSSCCGGGHHHHHHHHHHHHHH
T ss_pred ---hhccCCceEEEEeCCCCCCCHHHHHHHHHhCCC-CEEEEECCCCCcchhhCHHHHHHHHHHHHHh
Confidence 136789999999999999999999999999997 7999999999999999999999999999975
|
| >d1b6ga_ c.69.1.8 (A:) Haloalkane dehalogenase {Xanthobacter autotrophicus [TaxId: 280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloalkane dehalogenase domain: Haloalkane dehalogenase species: Xanthobacter autotrophicus [TaxId: 280]
Probab=100.00 E-value=3.3e-36 Score=259.11 Aligned_cols=274 Identities=26% Similarity=0.377 Sum_probs=173.5
Q ss_pred ccceeeEE----eCcEEEEEEEcCCCCCCCceEEEEcCCCCCCccchhhHHHhhhCCCeEEEeCCCCCCCCCCCCCCCCC
Q 022534 10 REYGSYIK----SGEYRWFVRETGSADSRLGTIVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDD 85 (295)
Q Consensus 10 ~~~~~~~~----~~~~~~~~~~~g~~~~~~~~vv~lHG~~~~~~~w~~~~~~l~~~~~~via~Dl~G~G~S~~~~~~~~~ 85 (295)
|....|++ .+|+++||.+.|++++ .|+|||+||+++++..|..+++.|+++||+|+++|+||||+|+++.. .
T Consensus 19 p~~~~~~~~~~~~~g~~~~y~~~G~~~~-~p~llllHG~~~~~~~~~~~~~~l~~~~~~vi~~Dl~G~G~S~~~~~---~ 94 (310)
T d1b6ga_ 19 PFSPNYLDDLPGYPGLRAHYLDEGNSDA-EDVFLCLHGEPTWSYLYRKMIPVFAESGARVIAPDFFGFGKSDKPVD---E 94 (310)
T ss_dssp CCCCEEEESCTTCTTCEEEEEEEECTTC-SCEEEECCCTTCCGGGGTTTHHHHHHTTCEEEEECCTTSTTSCEESC---G
T ss_pred CCCCceeccccCCCCEEEEEEEecCCCC-CCEEEEECCCCCchHHHHHHHHHhhccCceEEEeeecCccccccccc---c
Confidence 44455554 6899999999998654 57899999999999999999999988899999999999999997543 2
Q ss_pred CCCCHHHHHHHHHHHHHHhCCCCceEEEEecccch-HHHHHHHHhCcCccceeEEEcCCCCCCCCCchhhhhh-hcccch
Q 022534 86 FDFTENEFHEELDKLLDVLEVKYPFFLVVQGFLVG-SYGLTWALKNPSRISKLAILNSPLTASSPLPGLFQQL-RIPLLG 163 (295)
Q Consensus 86 ~~~~~~~~~~~l~~~~~~l~~~~~~~lv~~G~~~G-~~~~~~a~~~p~~v~~lil~~~p~~~~~~~~~~~~~~-~~~~~~ 163 (295)
..|+++++++++.++++++++++ ++|+ |||+| .+++.+|+++|++|+++|+++++..........+... ..+...
T Consensus 95 ~~~~~~~~~~~l~~~l~~l~~~~-~~lv--GhS~Gg~ia~~~A~~~P~~V~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (310)
T d1b6ga_ 95 EDYTFEFHRNFLLALIERLDLRN-ITLV--VQDWGGFLGLTLPMADPSRFKRLIIMNACLMTDPVTQPAFSAFVTQPADG 171 (310)
T ss_dssp GGCCHHHHHHHHHHHHHHHTCCS-EEEE--ECTHHHHHHTTSGGGSGGGEEEEEEESCCCCCCTTTCTHHHHTTTSSTTT
T ss_pred ccccccccccchhhhhhhccccc-cccc--cceecccccccchhhhccccceEEEEcCccCCCcccchhHHHHhhcchhh
Confidence 35789999999999999999885 6666 67765 5678899999999999999976543221111111111 000000
Q ss_pred hhhhhhH------HHHHHHHHhCCCccccccccccccccccccCCc-hh-HHHHHHHhcch--hhh-hHhhhcCcCCCCC
Q 022534 164 EFTAQNA------IMAERFIEAGSPYVLKLDKADVYRLPYLASSGP-GF-ALLEAARKVNF--KDI-SSRIGAGFSSGSW 232 (295)
Q Consensus 164 ~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~--~~~-~~~~~~~~~~~~~ 232 (295)
....... .....+.....+.... .....+..++...... +. .+......... .+. ..... .....+
T Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~ 248 (310)
T d1b6ga_ 172 FTAWKYDLVTPSDLRLDQFMKRWAPTLTE-AEASAYAAPFPDTSYQAGVRKFPKMVAQRDQACIDISTEAIS--FWQNDW 248 (310)
T ss_dssp HHHHHHHHHSCSSCCHHHHHHHHSTTCCH-HHHHHHHTTCSSGGGCHHHHHHHHHHHSCCHHHHHHHHHHHH--HHHHTC
T ss_pred hhhhhhhhccchhhhhhhhhhccCccccH-HHHHHHHhhcchhhhhhcchhhhhhhhhhhhhhhhhhhhhhH--Hhhccc
Confidence 0000000 0000000000000000 0000010011000000 00 00000000000 000 00000 001267
Q ss_pred CCcEEEEEeCCCCCCCcchHHHHHhcCCCCeEEEEecCCCCCCCCCChHHHHHHHHHHHHh
Q 022534 233 DKPVLVAWGISDKYLPQSVAEEFQKGNPNVVKLQMIEGAGHMPQEDWPEKVVDGLRYFFLN 293 (295)
Q Consensus 233 ~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 293 (295)
++|+++++|++|.+++++....+++.+++..+++++++|||++++|+|+.+++.|+.||++
T Consensus 249 ~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~GH~~~~e~pe~v~~~i~~Fl~~ 309 (310)
T d1b6ga_ 249 NGQTFMAIGMKDKLLGPDVMYPMKALINGCPEPLEIADAGHFVQEFGEQVAREALKHFAET 309 (310)
T ss_dssp CSEEEEEEETTCSSSSHHHHHHHHHHSTTCCCCEEETTCCSCGGGGHHHHHHHHHHHHHHT
T ss_pred CCCeEEEEeCCCCCCCHHHHHHHHHhcCCCccEEEECCCcCchhhhCHHHHHHHHHHHHhC
Confidence 8999999999999999999999998888745789999999999999999999999999985
|
| >d1c4xa_ c.69.1.10 (A:) 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (BPHD) {Rhodococcus sp., strain rha1 [TaxId: 1831]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carbon-carbon bond hydrolase domain: 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (BPHD) species: Rhodococcus sp., strain rha1 [TaxId: 1831]
Probab=100.00 E-value=2.7e-36 Score=255.72 Aligned_cols=267 Identities=19% Similarity=0.224 Sum_probs=166.6
Q ss_pred eeeEEeCcEEEEEEEcCCCCCCCceEEEEcCCCCCCc---cchhhHHHhhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCC
Q 022534 13 GSYIKSGEYRWFVRETGSADSRLGTIVFLHGAPSHSY---SYRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFT 89 (295)
Q Consensus 13 ~~~~~~~~~~~~~~~~g~~~~~~~~vv~lHG~~~~~~---~w~~~~~~l~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~ 89 (295)
-..+.++++.+||...|+++ +|+||||||++++.. .|..+++.|++ +|+|+++|+||||.|+.+........++
T Consensus 6 ~~~~~~~~~~~h~~~~G~~~--~p~ivllHG~~~~~~~~~~~~~~~~~L~~-~~~vi~~D~~G~G~S~~~~~~~~~~~~~ 82 (281)
T d1c4xa_ 6 EKRFPSGTLASHALVAGDPQ--SPAVVLLHGAGPGAHAASNWRPIIPDLAE-NFFVVAPDLIGFGQSEYPETYPGHIMSW 82 (281)
T ss_dssp EEEECCTTSCEEEEEESCTT--SCEEEEECCCSTTCCHHHHHGGGHHHHHT-TSEEEEECCTTSTTSCCCSSCCSSHHHH
T ss_pred EEEEccCCEEEEEEEEecCC--CCEEEEECCCCCCCcHHHHHHHHHHHHhC-CCEEEEEeCCCCccccccccccccchhh
Confidence 34567788999999999764 579999999987554 48899999985 8999999999999999764322122234
Q ss_pred HHHHHHHHHHHHHHhCCCCceEEEEecccch-HHHHHHHHhCcCccceeEEEcCCCCCCCCCchhhhhhhcccchhhhhh
Q 022534 90 ENEFHEELDKLLDVLEVKYPFFLVVQGFLVG-SYGLTWALKNPSRISKLAILNSPLTASSPLPGLFQQLRIPLLGEFTAQ 168 (295)
Q Consensus 90 ~~~~~~~l~~~~~~l~~~~~~~lv~~G~~~G-~~~~~~a~~~p~~v~~lil~~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (295)
.+++++++.+++++++.++ ++++ |||+| .+++.+|.++|++|+++++++++.......+..............
T Consensus 83 ~~~~~~~i~~~i~~~~~~~-~~lv--GhS~Gg~ia~~~a~~~p~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~--- 156 (281)
T d1c4xa_ 83 VGMRVEQILGLMNHFGIEK-SHIV--GNSMGGAVTLQLVVEAPERFDKVALMGSVGAPMNARPPELARLLAFYADPR--- 156 (281)
T ss_dssp HHHHHHHHHHHHHHHTCSS-EEEE--EETHHHHHHHHHHHHCGGGEEEEEEESCCSSCCSSCCHHHHHHHTGGGSCC---
T ss_pred HHHhhhhcccccccccccc-ceec--cccccccccccccccccccccceEEeccccCccccchhHHHHHHHhhhhcc---
Confidence 6788999999999998875 6666 66765 578889999999999999997643332222211111110000000
Q ss_pred hHHHHHHHHHhC--CCccccccccccccccccccCCchhH-HHHHHHhcchhhhhHhhhc-CcCCCCCCCcEEEEEeCCC
Q 022534 169 NAIMAERFIEAG--SPYVLKLDKADVYRLPYLASSGPGFA-LLEAARKVNFKDISSRIGA-GFSSGSWDKPVLVAWGISD 244 (295)
Q Consensus 169 ~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~-~~~~~~~~~P~l~i~G~~D 244 (295)
........... .+............. +.....+... ........ .......... ....+++++|+|+|+|++|
T Consensus 157 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~i~~P~lii~G~~D 233 (281)
T d1c4xa_ 157 -LTPYRELIHSFVYDPENFPGMEEIVKSR-FEVANDPEVRRIQEVMFES-MKAGMESLVIPPATLGRLPHDVLVFHGRQD 233 (281)
T ss_dssp -HHHHHHHHHTTSSCSTTCTTHHHHHHHH-HHHHHCHHHHHHHHHHHHH-HSSCCGGGCCCHHHHTTCCSCEEEEEETTC
T ss_pred -cchhhhhhhhhcccccccchhhhHHHHH-hhhcccchhhhhhhhhhhH-HhhhhhhhccchhhhhhhccceEEEEeCCC
Confidence 00001111110 000000000000000 0000000000 00000000 0000000000 0001367899999999999
Q ss_pred CCCCcchHHHHHhcCCCCeEEEEecCCCCCCCCCChHHHHHHHHHHHH
Q 022534 245 KYLPQSVAEEFQKGNPNVVKLQMIEGAGHMPQEDWPEKVVDGLRYFFL 292 (295)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~ 292 (295)
.+++++.++.+++.+++ +++++++++||++++|+|++|++.|.+||.
T Consensus 234 ~~~~~~~~~~~~~~~~~-~~~~~i~~~gH~~~~e~p~~~~~~i~~Fl~ 280 (281)
T d1c4xa_ 234 RIVPLDTSLYLTKHLKH-AELVVLDRCGHWAQLERWDAMGPMLMEHFR 280 (281)
T ss_dssp SSSCTHHHHHHHHHCSS-EEEEEESSCCSCHHHHSHHHHHHHHHHHHH
T ss_pred CCcCHHHHHHHHHHCCC-CEEEEECCCCCchHHhCHHHHHHHHHHHhC
Confidence 99999999999999987 799999999999999999999999999996
|
| >d1zd3a2 c.69.1.11 (A:225-547) Mammalian epoxide hydrolase, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Epoxide hydrolase domain: Mammalian epoxide hydrolase, C-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.2e-35 Score=253.26 Aligned_cols=269 Identities=23% Similarity=0.305 Sum_probs=172.7
Q ss_pred eeEEe-CcEEEEEEEcCCCCCCCceEEEEcCCCCCCccchhhHHHhhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCCHHH
Q 022534 14 SYIKS-GEYRWFVRETGSADSRLGTIVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTENE 92 (295)
Q Consensus 14 ~~~~~-~~~~~~~~~~g~~~~~~~~vv~lHG~~~~~~~w~~~~~~l~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~ 92 (295)
.|+++ +|+++||.+.|++ |+|||+||+++++..|..+++.|+++||+|+++|+||||+|+.+.. ...|+.++
T Consensus 14 ~~v~~~~g~~i~y~~~G~g----p~vlllHG~~~~~~~~~~~~~~L~~~g~~vi~~D~~G~G~S~~~~~---~~~~~~~~ 86 (322)
T d1zd3a2 14 GYVTVKPRVRLHFVELGSG----PAVCLCHGFPESWYSWRYQIPALAQAGYRVLAMDMKGYGESSAPPE---IEEYCMEV 86 (322)
T ss_dssp EEEEEETTEEEEEEEECCS----SEEEEECCTTCCGGGGTTHHHHHHHTTCEEEEEECTTSTTSCCCSC---GGGGSHHH
T ss_pred eEEEECCCCEEEEEEEcCC----CeEEEECCCCCCHHHHHHHHHHHHHCCCEEEEeccccccccccccc---cccccccc
Confidence 46776 6999999999853 5899999999999999999999988899999999999999998643 23568899
Q ss_pred HHHHHHHHHHHhCCCCceEEEEecccch-HHHHHHHHhCcCccceeEEEcCCCCCCCCCchhhhhhh-cccc------hh
Q 022534 93 FHEELDKLLDVLEVKYPFFLVVQGFLVG-SYGLTWALKNPSRISKLAILNSPLTASSPLPGLFQQLR-IPLL------GE 164 (295)
Q Consensus 93 ~~~~l~~~~~~l~~~~~~~lv~~G~~~G-~~~~~~a~~~p~~v~~lil~~~p~~~~~~~~~~~~~~~-~~~~------~~ 164 (295)
+++++.+++++++.++ ++++ |||+| .+++.+|.++|++|+++++++++............... .+.. ..
T Consensus 87 ~~~~i~~l~~~l~~~~-~~lv--GhS~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (322)
T d1zd3a2 87 LCKEMVTFLDKLGLSQ-AVFI--GHDWGGMLVWYMALFYPERVRAVASLNTPFIPANPNMSPLESIKANPVFDYQLYFQE 163 (322)
T ss_dssp HHHHHHHHHHHHTCSC-EEEE--EETHHHHHHHHHHHHCTTTEEEEEEESCCCCCCCSSSCHHHHHHTCGGGHHHHHTTS
T ss_pred cchhhhhhhhcccccc-cccc--cccchHHHHHHHHHhCCccccceEEEcccccccccccchhhhhhccchhhhHHhhhc
Confidence 9999999999999886 5666 77776 46788899999999999999876544322111111000 0000 00
Q ss_pred -hhhhhH------HHHHHHHHhCCCccccccc-cccccc-------cccccCCchhH---HHHHHHhcchhhhh------
Q 022534 165 -FTAQNA------IMAERFIEAGSPYVLKLDK-ADVYRL-------PYLASSGPGFA---LLEAARKVNFKDIS------ 220 (295)
Q Consensus 165 -~~~~~~------~~~~~~~~~~~~~~~~~~~-~~~~~~-------~~~~~~~~~~~---~~~~~~~~~~~~~~------ 220 (295)
...... .....+............. ...... ........... .........+....
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (322)
T d1zd3a2 164 PGVAEAELEQNLSRTFKSLFRASDESVLSMHKVCEAGGLFVNSPEEPSLSRMVTEEEIQFYVQQFKKSGFRGPLNWYRNM 243 (322)
T ss_dssp TTHHHHHHHHTHHHHHHHHSCCTTSCCCCTTSHHHHTSSSTTSCSSCCCCTTCCHHHHHHHHHHHHHHTTHHHHHTTSCH
T ss_pred cchhhhhhhhhHHHHHHHHhhccchhhhhHHHHhhhhccccccccchhhhhhccHHHHHHHHHHHhhccccccccccccc
Confidence 000000 0001111000000000000 000000 00000000000 01111111111000
Q ss_pred ---HhhhcCcCCCCCCCcEEEEEeCCCCCCCcchHHHHHhcCCCCeEEEEecCCCCCCCCCChHHHHHHHHHHHHh
Q 022534 221 ---SRIGAGFSSGSWDKPVLVAWGISDKYLPQSVAEEFQKGNPNVVKLQMIEGAGHMPQEDWPEKVVDGLRYFFLN 293 (295)
Q Consensus 221 ---~~~~~~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 293 (295)
.........+++++||++|+|++|.+++++..+.+.+.+++ ++++++++|||++++|+|++|++.|.+||++
T Consensus 244 ~~~~~~~~~~~~~~i~~Pvl~i~G~~D~~~~~~~~~~~~~~~~~-~~~~~i~~~gH~~~~e~p~~v~~~i~~FL~~ 318 (322)
T d1zd3a2 244 ERNWKWACKSLGRKILIPALMVTAEKDFVLVPQMSQHMEDWIPH-LKRGHIEDCGHWTQMDKPTEVNQILIKWLDS 318 (322)
T ss_dssp HHHHHHHHTTTTCCCCSCEEEEEETTCSSSCGGGGTTGGGTCTT-CEEEEETTCCSCHHHHSHHHHHHHHHHHHHH
T ss_pred ccccccchhhhcccCCCCEEEEEeCCCCCCCHHHHHHHHHhCCC-CEEEEECCCCCchHHhCHHHHHHHHHHHHhh
Confidence 00011112247899999999999999999998889988987 7999999999999999999999999999986
|
| >d1a88a_ c.69.1.12 (A:) Chloroperoxidase L {Streptomyces lividans [TaxId: 1916]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Chloroperoxidase L species: Streptomyces lividans [TaxId: 1916]
Probab=100.00 E-value=2.5e-35 Score=247.91 Aligned_cols=261 Identities=22% Similarity=0.276 Sum_probs=163.5
Q ss_pred eeeEEeCcEEEEEEEcCCCCCCCceEEEEcCCCCCCccchhhHHHhhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCCHHH
Q 022534 13 GSYIKSGEYRWFVRETGSADSRLGTIVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTENE 92 (295)
Q Consensus 13 ~~~~~~~~~~~~~~~~g~~~~~~~~vv~lHG~~~~~~~w~~~~~~l~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~ 92 (295)
|...+.+|.++||.++|+++ .|+|||+||+++++..|..+++.|.++||+|+++|+||||.|+.+.. .|+.++
T Consensus 1 ~~i~~~dG~~l~y~~~G~~~--~~~vv~lHG~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~s~~~~~-----~~~~~~ 73 (275)
T d1a88a_ 1 GTVTTSDGTNIFYKDWGPRD--GLPVVFHHGWPLSADDWDNQMLFFLSHGYRVIAHDRRGHGRSDQPST-----GHDMDT 73 (275)
T ss_dssp CEEECTTSCEEEEEEESCTT--SCEEEEECCTTCCGGGGHHHHHHHHHTTCEEEEECCTTSTTSCCCSS-----CCSHHH
T ss_pred CEEEecCCCEEEEEEecCCC--CCeEEEECCCCCCHHHHHHHHHHHHhCCCEEEEEecccccccccccc-----cccccc
Confidence 45666789999999999754 36899999999999999999999977899999999999999997543 357899
Q ss_pred HHHHHHHHHHHhCCCCceEEEEecccchHH-HHHHHHhCcCccceeEEEcCCCCCCCCCchhhhhhhcccchhh---hhh
Q 022534 93 FHEELDKLLDVLEVKYPFFLVVQGFLVGSY-GLTWALKNPSRISKLAILNSPLTASSPLPGLFQQLRIPLLGEF---TAQ 168 (295)
Q Consensus 93 ~~~~l~~~~~~l~~~~~~~lv~~G~~~G~~-~~~~a~~~p~~v~~lil~~~p~~~~~~~~~~~~~~~~~~~~~~---~~~ 168 (295)
+++|+.+++++++.+++ +++++ +++|++ +..+|.++|++|+++++++++.....................+ ...
T Consensus 74 ~~~~~~~~l~~l~~~~~-~~vg~-s~~G~~~~~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (275)
T d1a88a_ 74 YAADVAALTEALDLRGA-VHIGH-STGGGEVARYVARAEPGRVAKAVLVSAVPPVMVKSDTNPDGLPLEVFDEFRAALAA 151 (275)
T ss_dssp HHHHHHHHHHHHTCCSE-EEEEE-THHHHHHHHHHHHSCTTSEEEEEEESCCCSCCBCBTTBTTSBCHHHHHHHHHHHHH
T ss_pred ccccccccccccccccc-ccccc-cccccchhhcccccCcchhhhhhhhcccccccccchhhhhhhhhhhhhhhhhhhhh
Confidence 99999999999998865 44432 345654 5567889999999999987543211110000000000000000 000
Q ss_pred hH-HHHHHHHHhCCCcccccccccc----ccccccc-c-CC-ch-hHHHHHHHhcchhhhhHhhhcCcCCCCCCCcEEEE
Q 022534 169 NA-IMAERFIEAGSPYVLKLDKADV----YRLPYLA-S-SG-PG-FALLEAARKVNFKDISSRIGAGFSSGSWDKPVLVA 239 (295)
Q Consensus 169 ~~-~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~-~-~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i 239 (295)
.. ........ ............. ....... . .. .. ..........++. ..+ +++++|+|+|
T Consensus 152 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~l------~~i~~P~l~i 221 (275)
T d1a88a_ 152 NRAQFYIDVPS-GPFYGFNREGATVSQGLIDHWWLQGMMGAANAHYECIAAFSETDFT---DDL------KRIDVPVLVA 221 (275)
T ss_dssp CHHHHHHHHHH-TTTTTTTSTTCCCCHHHHHHHHHHHHHSCHHHHHHHHHHHHHCCCH---HHH------HHCCSCEEEE
T ss_pred hhHHHHHhhhh-hhhhhcccchhhHHHHHHHHHHHhhcccchHHHHHHHHHhhhhhhh---HHH------Hhhcccccee
Confidence 00 00000100 0000000000000 0000000 0 00 00 0000111111111 111 1468999999
Q ss_pred EeCCCCCCCcch-HHHHHhcCCCCeEEEEecCCCCCCCCCChHHHHHHHHHHHHh
Q 022534 240 WGISDKYLPQSV-AEEFQKGNPNVVKLQMIEGAGHMPQEDWPEKVVDGLRYFFLN 293 (295)
Q Consensus 240 ~G~~D~~~~~~~-~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 293 (295)
+|++|++++.+. .+.+.+.+++ +++++++++||++++|+|++|++.|.+||++
T Consensus 222 ~G~~D~~~~~~~~~~~~~~~~~~-~~~~~i~~~gH~~~~e~p~~~~~~i~~Fl~s 275 (275)
T d1a88a_ 222 HGTDDQVVPYADAAPKSAELLAN-ATLKSYEGLPHGMLSTHPEVLNPDLLAFVKS 275 (275)
T ss_dssp EETTCSSSCSTTTHHHHHHHSTT-EEEEEETTCCTTHHHHCHHHHHHHHHHHHHC
T ss_pred ecCCCCCcCHHHHHHHHHHhCCC-CEEEEECCCCCchHHhCHHHHHHHHHHHHcC
Confidence 999999998754 5667778887 8999999999999999999999999999974
|
| >d1mtza_ c.69.1.7 (A:) Tricorn interacting factor F1 {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Proline iminopeptidase-like domain: Tricorn interacting factor F1 species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=100.00 E-value=1.6e-35 Score=250.16 Aligned_cols=266 Identities=20% Similarity=0.246 Sum_probs=164.9
Q ss_pred eeEEeCcEEEEEEEcCCCCCCCceEEEEcCCCCCCccchhhHHHhhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCCHHHH
Q 022534 14 SYIKSGEYRWFVRETGSADSRLGTIVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEF 93 (295)
Q Consensus 14 ~~~~~~~~~~~~~~~g~~~~~~~~vv~lHG~~~~~~~w~~~~~~l~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~ 93 (295)
.|++++|.+++|+..|++++ +|+|||+||+++++..|...+..+.++||+|+++|+||||+|+.+. ...|+++++
T Consensus 5 ~~~~~~g~~i~y~~~g~~~~-~~~iv~lHG~~g~~~~~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~----~~~~~~~~~ 79 (290)
T d1mtza_ 5 NYAKVNGIYIYYKLCKAPEE-KAKLMTMHGGPGMSHDYLLSLRDMTKEGITVLFYDQFGCGRSEEPD----QSKFTIDYG 79 (290)
T ss_dssp EEEEETTEEEEEEEECCSSC-SEEEEEECCTTTCCSGGGGGGGGGGGGTEEEEEECCTTSTTSCCCC----GGGCSHHHH
T ss_pred CeEEECCEEEEEEEcCCCCC-CCeEEEECCCCCchHHHHHHHHHHHHCCCEEEEEeCCCCccccccc----cccccccch
Confidence 58999999999999997653 5799999999999999988888877679999999999999999754 235788999
Q ss_pred HHHHHHHHHHh-CCCCceEEEEecccch-HHHHHHHHhCcCccceeEEEcCCCCCCCCCchhhhhhhcccchhhhhhhHH
Q 022534 94 HEELDKLLDVL-EVKYPFFLVVQGFLVG-SYGLTWALKNPSRISKLAILNSPLTASSPLPGLFQQLRIPLLGEFTAQNAI 171 (295)
Q Consensus 94 ~~~l~~~~~~l-~~~~~~~lv~~G~~~G-~~~~~~a~~~p~~v~~lil~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (295)
++++.++++++ +.+ +++++ |||+| .+++.+|.++|++|+++++++++..... .................. .
T Consensus 80 ~~~l~~ll~~l~~~~-~~~lv--GhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~-~~~~~~~~~~~~~~~~~~--~- 152 (290)
T d1mtza_ 80 VEEAEALRSKLFGNE-KVFLM--GSSYGGALALAYAVKYQDHLKGLIVSGGLSSVPL-TVKEMNRLIDELPAKYRD--A- 152 (290)
T ss_dssp HHHHHHHHHHHHTTC-CEEEE--EETHHHHHHHHHHHHHGGGEEEEEEESCCSBHHH-HHHHHHHHHHTSCHHHHH--H-
T ss_pred hhhhhhhhccccccc-cccee--cccccchhhhhhhhcChhhheeeeecccccCccc-chhhhhhhhhhhhHHHHH--H-
Confidence 99999999997 455 57777 66766 4688899999999999998864332100 000000000000000000 0
Q ss_pred HHHHHHHhCC-Cc-cccccccccc-cccccccC-Cchh-HHHHHHHhcch-------hhh-----hHhhhcCcCCCCCCC
Q 022534 172 MAERFIEAGS-PY-VLKLDKADVY-RLPYLASS-GPGF-ALLEAARKVNF-------KDI-----SSRIGAGFSSGSWDK 234 (295)
Q Consensus 172 ~~~~~~~~~~-~~-~~~~~~~~~~-~~~~~~~~-~~~~-~~~~~~~~~~~-------~~~-----~~~~~~~~~~~~~~~ 234 (295)
...+..... .. .......... ........ .+.. ........... ... ..........+++++
T Consensus 153 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 231 (290)
T d1mtza_ 153 -IKKYGSSGSYENPEYQEAVNYFYHQHLLRSEDWPPEVLKSLEYAERRNVYRIMNGPNEFTITGTIKDWDITDKISAIKI 231 (290)
T ss_dssp -HHHHHHHTCTTCHHHHHHHHHHHHHHTSCSSCCCHHHHHHHHHHHHSSHHHHHTCSBTTBCCSTTTTCBCTTTGGGCCS
T ss_pred -HHHhhhhccccchhHHHHHHHHhhhhhcccccchHHHHHHHHHHhhhhhhhhhcchhHHhHhhhhhcccHHHHhhcccc
Confidence 000000000 00 0000000000 00000000 0000 00000000000 000 000000001135789
Q ss_pred cEEEEEeCCCCCCCcchHHHHHhcCCCCeEEEEecCCCCCCCCCChHHHHHHHHHHHHhc
Q 022534 235 PVLVAWGISDKYLPQSVAEEFQKGNPNVVKLQMIEGAGHMPQEDWPEKVVDGLRYFFLNY 294 (295)
Q Consensus 235 P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~ 294 (295)
|+++|+|++|.+++ +.+..+.+.+++ +++++++++||++++|+|++|++.|.+||.+.
T Consensus 232 P~l~i~G~~D~~~~-~~~~~~~~~~~~-~~~~~~~~~gH~~~~e~p~~~~~~i~~FL~~h 289 (290)
T d1mtza_ 232 PTLITVGEYDEVTP-NVARVIHEKIAG-SELHVFRDCSHLTMWEDREGYNKLLSDFILKH 289 (290)
T ss_dssp CEEEEEETTCSSCH-HHHHHHHHHSTT-CEEEEETTCCSCHHHHSHHHHHHHHHHHHHTC
T ss_pred eEEEEEeCCCCCCH-HHHHHHHHHCCC-CEEEEECCCCCchHHhCHHHHHHHHHHHHHHh
Confidence 99999999998764 677888899987 79999999999999999999999999999863
|
| >d1va4a_ c.69.1.12 (A:) Arylesterase {Pseudomonas fluorescens [TaxId: 294]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Arylesterase species: Pseudomonas fluorescens [TaxId: 294]
Probab=100.00 E-value=7e-35 Score=244.09 Aligned_cols=258 Identities=18% Similarity=0.255 Sum_probs=162.3
Q ss_pred eeeEEeCcEEEEEEEcCCCCCCCceEEEEcCCCCCCccchhhHHHhhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCCHHH
Q 022534 13 GSYIKSGEYRWFVRETGSADSRLGTIVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTENE 92 (295)
Q Consensus 13 ~~~~~~~~~~~~~~~~g~~~~~~~~vv~lHG~~~~~~~w~~~~~~l~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~ 92 (295)
+.|++.||++++|++.|++ |||||+||+++++..|..+++.|+++||+|+++|+||||.|+.+.. .++.++
T Consensus 1 s~f~~~dG~~l~y~~~G~g----~~vv~lHG~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~-----~~~~~~ 71 (271)
T d1va4a_ 1 STFVAKDGTQIYFKDWGSG----KPVLFSHGWLLDADMWEYQMEYLSSRGYRTIAFDRRGFGRSDQPWT-----GNDYDT 71 (271)
T ss_dssp CEEECTTSCEEEEEEESSS----SEEEEECCTTCCGGGGHHHHHHHHTTTCEEEEECCTTSTTSCCCSS-----CCSHHH
T ss_pred CEEEeECCeEEEEEEEcCC----CeEEEECCCCCCHHHHHHHHHHHHhCCCEEEEEecccccccccccc-----cccccc
Confidence 4689999999999999964 4899999999999999999999987799999999999999997543 347899
Q ss_pred HHHHHHHHHHHhCCCCceEEEEecccchHHH-HHHHHhCcCccceeEEEcCCCCCCCCCchhhhhhhc----ccchhhhh
Q 022534 93 FHEELDKLLDVLEVKYPFFLVVQGFLVGSYG-LTWALKNPSRISKLAILNSPLTASSPLPGLFQQLRI----PLLGEFTA 167 (295)
Q Consensus 93 ~~~~l~~~~~~l~~~~~~~lv~~G~~~G~~~-~~~a~~~p~~v~~lil~~~p~~~~~~~~~~~~~~~~----~~~~~~~~ 167 (295)
+++++.+++++++.++ +++++| +++|+++ ..+|..+|+++.++++++++.......+........ .+......
T Consensus 72 ~~~~~~~~~~~~~~~~-~~~vg~-s~gG~~~~~~~a~~~p~~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (271)
T d1va4a_ 72 FADDIAQLIEHLDLKE-VTLVGF-SMGGGDVARYIARHGSARVAGLVLLGAVTPLFGQKPDYPQGVPLDVFARFKTELLK 149 (271)
T ss_dssp HHHHHHHHHHHHTCCS-EEEEEE-TTHHHHHHHHHHHHCSTTEEEEEEESCCCSCCBCBTTBTTSBCHHHHHHHHHHHHH
T ss_pred ccccceeeeeecCCCc-ceeecc-ccccccccccccccccceeeEEEeecccccccccchhhhhhhhhhHHHHHHHHhhh
Confidence 9999999999999886 445533 2456554 455678999999999886543221111110000000 00000000
Q ss_pred hhHHHHH----HHHHhCCCccccccc-cccccccccccCCch--hHHHHHHHhcchhhhhHhhhcCcCCCCCCCcEEEEE
Q 022534 168 QNAIMAE----RFIEAGSPYVLKLDK-ADVYRLPYLASSGPG--FALLEAARKVNFKDISSRIGAGFSSGSWDKPVLVAW 240 (295)
Q Consensus 168 ~~~~~~~----~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~ 240 (295)
....... .+............. ........ ..... ..........+.. ..+ +++++|+++|+
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~---~~l------~~i~~Pvl~i~ 218 (271)
T d1va4a_ 150 DRAQFISDFNAPFYGINKGQVVSQGVQTQTLQIAL--LASLKATVDCVTAFAETDFR---PDM------AKIDVPTLVIH 218 (271)
T ss_dssp HHHHHHHHHHHHHHTGGGTCCCCHHHHHHHHHHHH--HSCHHHHHHHHHHHHHCCCH---HHH------HHCCSCEEEEE
T ss_pred hhhhhhhhhcchhhcccchhhhhhhHHHHHHhhhh--hhhhhhhhhcccccchhhhh---hhh------hhcccceeecc
Confidence 0000000 111000000000000 00000000 00000 0001111111111 111 15689999999
Q ss_pred eCCCCCCCcchHHHHH-hcCCCCeEEEEecCCCCCCCCCChHHHHHHHHHHHHh
Q 022534 241 GISDKYLPQSVAEEFQ-KGNPNVVKLQMIEGAGHMPQEDWPEKVVDGLRYFFLN 293 (295)
Q Consensus 241 G~~D~~~~~~~~~~~~-~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 293 (295)
|++|.+++.+...++. +.+++ ++++++|+|||++++|+|++|++.|.+||++
T Consensus 219 g~~D~~~~~~~~~~~~~~~~~~-~~~~~~~~~gH~~~~e~p~~~~~~i~~fL~k 271 (271)
T d1va4a_ 219 GDGDQIVPFETTGKVAAELIKG-AELKVYKDAPHGFAVTHAQQLNEDLLAFLKR 271 (271)
T ss_dssp ETTCSSSCGGGTHHHHHHHSTT-CEEEEETTCCTTHHHHTHHHHHHHHHHHHTC
T ss_pred cCCCCCCCHHHHHHHHHHhCCC-CEEEEECCCCCchHHhCHHHHHHHHHHHHCc
Confidence 9999999988776664 56676 7999999999999999999999999999974
|
| >d1a8sa_ c.69.1.12 (A:) Chloroperoxidase F {Pseudomonas fluorescens [TaxId: 294]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Chloroperoxidase F species: Pseudomonas fluorescens [TaxId: 294]
Probab=100.00 E-value=1.1e-34 Score=243.60 Aligned_cols=259 Identities=17% Similarity=0.220 Sum_probs=161.0
Q ss_pred eeEEeCcEEEEEEEcCCCCCCCceEEEEcCCCCCCccchhhHHHhhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCCHHHH
Q 022534 14 SYIKSGEYRWFVRETGSADSRLGTIVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEF 93 (295)
Q Consensus 14 ~~~~~~~~~~~~~~~g~~~~~~~~vv~lHG~~~~~~~w~~~~~~l~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~ 93 (295)
.|.+.||.+++|++.|++ |||||+||+++++..|..+++.|.++||+|+++|+||||.|+.+.. .|+.+++
T Consensus 2 ~f~~~dG~~i~y~~~G~g----~pvvllHG~~~~~~~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~-----~~~~~~~ 72 (273)
T d1a8sa_ 2 TFTTRDGTQIYYKDWGSG----QPIVFSHGWPLNADSWESQMIFLAAQGYRVIAHDRRGHGRSSQPWS-----GNDMDTY 72 (273)
T ss_dssp EEECTTSCEEEEEEESCS----SEEEEECCTTCCGGGGHHHHHHHHHTTCEEEEECCTTSTTSCCCSS-----CCSHHHH
T ss_pred EEEeeCCcEEEEEEECCC----CeEEEECCCCCCHHHHHHHHHHHHhCCCEEEEEechhcCccccccc-----cccccch
Confidence 578889999999999863 5899999999999999999999977799999999999999997643 3588999
Q ss_pred HHHHHHHHHHhCCCCceEEEEecccchHHHHH-HHHhCcCccceeEEEcCCCCCCCC---Cchhhhhhhcccchhhhhhh
Q 022534 94 HEELDKLLDVLEVKYPFFLVVQGFLVGSYGLT-WALKNPSRISKLAILNSPLTASSP---LPGLFQQLRIPLLGEFTAQN 169 (295)
Q Consensus 94 ~~~l~~~~~~l~~~~~~~lv~~G~~~G~~~~~-~a~~~p~~v~~lil~~~p~~~~~~---~~~~~~~~~~~~~~~~~~~~ 169 (295)
++++.+++++++.+++ ++++ |+++|++++. +|..+|++|++++++++....... .+.................+
T Consensus 73 ~~~~~~~l~~l~~~~~-~lvg-~s~gG~~~~~~~a~~~p~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (273)
T d1a8sa_ 73 ADDLAQLIEHLDLRDA-VLFG-FSTGGGEVARYIGRHGTARVAKAGLISAVPPLMLKTEANPGGLPMEVFDGIRQASLAD 150 (273)
T ss_dssp HHHHHHHHHHTTCCSE-EEEE-ETHHHHHHHHHHHHHCSTTEEEEEEESCCCSCCBCCSSCTTSBCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCccce-eeee-eccCCccchhhhhhhhhhccceeEEEecccccccccccccccchhhhhhhHHHHHHHH
Confidence 9999999999998864 4553 2345665554 456789999999998653321110 01000000000000000000
Q ss_pred -HHHHHHHHHhCCCccccccc---cccccccc--cccCCch--hHHHHHHHhcchhhhhHhhhcCcCCCCCCCcEEEEEe
Q 022534 170 -AIMAERFIEAGSPYVLKLDK---ADVYRLPY--LASSGPG--FALLEAARKVNFKDISSRIGAGFSSGSWDKPVLVAWG 241 (295)
Q Consensus 170 -~~~~~~~~~~~~~~~~~~~~---~~~~~~~~--~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G 241 (295)
......+............. ........ ....... ..........++ ...+ +++++|+++|+|
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~------~~i~~Pvlii~g 221 (273)
T d1a8sa_ 151 RSQLYKDLASGPFFGFNQPGAKSSAGMVDWFWLQGMAAGHKNAYDCIKAFSETDF---TEDL------KKIDVPTLVVHG 221 (273)
T ss_dssp HHHHHHHHHHTTSSSTTSTTCCCCHHHHHHHHHHHHHSCHHHHHHHHHHHHHCCC---HHHH------HTCCSCEEEEEE
T ss_pred HHHHHHHHhhhhhhhcccchhhhhHHHHHHHHHhhcccchhhhhhhHHHhhhhhh---hHHH------HhhccceEEEec
Confidence 00011111110000000000 00000000 0000000 000111111111 1111 267899999999
Q ss_pred CCCCCCCcchHHHHHh-cCCCCeEEEEecCCCCCCCCCChHHHHHHHHHHHHh
Q 022534 242 ISDKYLPQSVAEEFQK-GNPNVVKLQMIEGAGHMPQEDWPEKVVDGLRYFFLN 293 (295)
Q Consensus 242 ~~D~~~~~~~~~~~~~-~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 293 (295)
++|++++.+.+..+.+ ..++ ++++++|++||++++|+|++|++.|.+||++
T Consensus 222 ~~D~~~~~~~~~~~~~~~~~~-~~~~~i~~~gH~~~~e~p~~~~~~i~~Fl~G 273 (273)
T d1a8sa_ 222 DADQVVPIEASGIASAALVKG-STLKIYSGAPHGLTDTHKDQLNADLLAFIKG 273 (273)
T ss_dssp TTCSSSCSTTTHHHHHHHSTT-CEEEEETTCCSCHHHHTHHHHHHHHHHHHHC
T ss_pred CCCCCCCHHHHHHHHHHhCCC-CEEEEECCCCCchHHhCHHHHHHHHHHHcCC
Confidence 9999998887777654 4565 7999999999999999999999999999974
|
| >d1ehya_ c.69.1.11 (A:) Bacterial epoxide hydrolase {Agrobacterium radiobacter [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Epoxide hydrolase domain: Bacterial epoxide hydrolase species: Agrobacterium radiobacter [TaxId: 358]
Probab=100.00 E-value=9.2e-35 Score=246.61 Aligned_cols=265 Identities=19% Similarity=0.271 Sum_probs=165.2
Q ss_pred eeeEEeCcEEEEEEEcCCCCCCCceEEEEcCCCCCCccchhhHHHhhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCCHHH
Q 022534 13 GSYIKSGEYRWFVRETGSADSRLGTIVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTENE 92 (295)
Q Consensus 13 ~~~~~~~~~~~~~~~~g~~~~~~~~vv~lHG~~~~~~~w~~~~~~l~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~ 92 (295)
-.+++++|.++||.+.|++ |+|||+||+++++..|..+++.|++ +|+|+++|+||||.|+.+.... ...++.++
T Consensus 10 ~~~~~~~~~~l~y~~~G~g----p~vv~lHG~~~~~~~~~~~~~~l~~-~~~vi~~D~~G~G~s~~~~~~~-~~~~~~~~ 83 (293)
T d1ehya_ 10 HYEVQLPDVKIHYVREGAG----PTLLLLHGWPGFWWEWSKVIGPLAE-HYDVIVPDLRGFGDSEKPDLND-LSKYSLDK 83 (293)
T ss_dssp EEEEECSSCEEEEEEEECS----SEEEEECCSSCCGGGGHHHHHHHHT-TSEEEEECCTTSTTSCCCCTTC-GGGGCHHH
T ss_pred ceEEEECCEEEEEEEECCC----CeEEEECCCCCCHHHHHHHHHHHhc-CCEEEEecCCcccCCccccccc-cccccchh
Confidence 3579999999999999853 5899999999999999999999976 8999999999999999765432 34568899
Q ss_pred HHHHHHHHHHHhCCCCceEEEEecccch-HHHHHHHHhCcCccceeEEEcCCCCCCCCCchhh--------hhh-hcccc
Q 022534 93 FHEELDKLLDVLEVKYPFFLVVQGFLVG-SYGLTWALKNPSRISKLAILNSPLTASSPLPGLF--------QQL-RIPLL 162 (295)
Q Consensus 93 ~~~~l~~~~~~l~~~~~~~lv~~G~~~G-~~~~~~a~~~p~~v~~lil~~~p~~~~~~~~~~~--------~~~-~~~~~ 162 (295)
+++++.++++++++++ ++++ |||+| .+++.+|.++|++++++++++++.....+..... ... ..+..
T Consensus 84 ~a~~~~~~~~~l~~~~-~~lv--GhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (293)
T d1ehya_ 84 AADDQAALLDALGIEK-AYVV--GHDFAAIVLHKFIRKYSDRVIKAAIFDPIQPDFGPVYFGLGHVHESWYSQFHQLDMA 160 (293)
T ss_dssp HHHHHHHHHHHTTCCC-EEEE--EETHHHHHHHHHHHHTGGGEEEEEEECCSCTTC-----------CCHHHHHTTCHHH
T ss_pred hhhHHHhhhhhcCccc-cccc--cccccccchhcccccCccccceeeeeeccCccccchhhhhhhhhhhhhhhhhccchh
Confidence 9999999999999886 5666 67776 4688899999999999999875432211110000 000 00000
Q ss_pred hhhhhhhH----HHHHHHHHhC--CCccccccccccccccccccCCchh--HHHHHHHhcchhhhhHhhhcCcCCCCCCC
Q 022534 163 GEFTAQNA----IMAERFIEAG--SPYVLKLDKADVYRLPYLASSGPGF--ALLEAARKVNFKDISSRIGAGFSSGSWDK 234 (295)
Q Consensus 163 ~~~~~~~~----~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (295)
........ .....+.... ....... ............+.. ......+... .... ..........+++
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~ 235 (293)
T d1ehya_ 161 VEVVGSSREVCKKYFKHFFDHWSYRDELLTE---EELEVHVDNCMKPDNIHGGFNYYRANI-RPDA-ALWTDLDHTMSDL 235 (293)
T ss_dssp HHHHTSCHHHHHHHHHHHHHHTSSSSCCSCH---HHHHHHHHHHTSTTHHHHHHHHHHHHS-SSSC-CCCCTGGGSCBCS
T ss_pred hhhhccchhHHHHHHHHhhhhcccccccccH---HHHHhhhhccccchhhhhhhhhhhhcc-ccch-hhhhhhhhhccCC
Confidence 00000000 0011111110 0000000 000000000000000 0000000000 0000 0000111235789
Q ss_pred cEEEEEeCCCCCCCcchHH-HHHhcCCCCeEEEEecCCCCCCCCCChHHHHHHHHHHHH
Q 022534 235 PVLVAWGISDKYLPQSVAE-EFQKGNPNVVKLQMIEGAGHMPQEDWPEKVVDGLRYFFL 292 (295)
Q Consensus 235 P~l~i~G~~D~~~~~~~~~-~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~ 292 (295)
|+++|+|++|.+++.+... .+.+..++ ++++++++|||++++|+|++|++.|++|+.
T Consensus 236 Pvlii~G~~D~~~~~~~~~~~~~~~~~~-~~~~~i~~~gH~~~~e~Pe~~~~~I~~Ffr 293 (293)
T d1ehya_ 236 PVTMIWGLGDTCVPYAPLIEFVPKYYSN-YTMETIEDCGHFLMVEKPEIAIDRIKTAFR 293 (293)
T ss_dssp CEEEEEECCSSCCTTHHHHHHHHHHBSS-EEEEEETTCCSCHHHHCHHHHHHHHHHHCC
T ss_pred ceEEEEeCCCCCcCHHHHHHHHHHhCCC-CEEEEECCCCCchHHHCHHHHHHHHHHhhC
Confidence 9999999999999877654 45666776 899999999999999999999999999974
|
| >d2rhwa1 c.69.1.10 (A:4-286) 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (BPHD) {Burkholderia xenovorans [TaxId: 36873]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carbon-carbon bond hydrolase domain: 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (BPHD) species: Burkholderia xenovorans [TaxId: 36873]
Probab=100.00 E-value=3.1e-34 Score=242.99 Aligned_cols=260 Identities=19% Similarity=0.314 Sum_probs=160.8
Q ss_pred eeeEEeC-----cEEEEEEEcCCCCCCCceEEEEcCCCCCCccchhhH---HHhhhCCCeEEEeCCCCCCCCCCCCCCCC
Q 022534 13 GSYIKSG-----EYRWFVRETGSADSRLGTIVFLHGAPSHSYSYRNVM---SQMSDAGFHCFAPDWLGFGFSDKPEKGYD 84 (295)
Q Consensus 13 ~~~~~~~-----~~~~~~~~~g~~~~~~~~vv~lHG~~~~~~~w~~~~---~~l~~~~~~via~Dl~G~G~S~~~~~~~~ 84 (295)
++|++++ ++++||.+.|++ |||||+||++.++..|..+. ..+.++||+|+++|+||||.|+.+...
T Consensus 7 ~~~~~~~~~~~~~~~i~y~~~G~G----~~ivllHG~~~~~~~~~~~~~~l~~~~~~g~~v~~~D~~G~G~S~~~~~~-- 80 (283)
T d2rhwa1 7 SKFVKINEKGFSDFNIHYNEAGNG----ETVIMLHGGGPGAGGWSNYYRNVGPFVDAGYRVILKDSPGFNKSDAVVMD-- 80 (283)
T ss_dssp EEEEEEEETTEEEEEEEEEEECCS----SEEEEECCCSTTCCHHHHHTTTHHHHHHTTCEEEEECCTTSTTSCCCCCS--
T ss_pred CccEEecCCccCCEEEEEEEEcCC----CeEEEECCCCCChhHHHHHHHHHHHHHHCCCEEEEEeCCCCccccccccc--
Confidence 4455544 478999999964 58999999999999987543 334456999999999999999976432
Q ss_pred CCCCCHHHHHHHHHHHHHHhCCCCceEEEEecccch-HHHHHHHHhCcCccceeEEEcCCCCCCCCCchhhhhhhcccch
Q 022534 85 DFDFTENEFHEELDKLLDVLEVKYPFFLVVQGFLVG-SYGLTWALKNPSRISKLAILNSPLTASSPLPGLFQQLRIPLLG 163 (295)
Q Consensus 85 ~~~~~~~~~~~~l~~~~~~l~~~~~~~lv~~G~~~G-~~~~~~a~~~p~~v~~lil~~~p~~~~~~~~~~~~~~~~~~~~ 163 (295)
.++...+++++.++++++++++ ++++ |||+| .+++.+|.++|++|+++++++++.................+..
T Consensus 81 --~~~~~~~~~~i~~li~~l~~~~-~~lv--GhS~Gg~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~ 155 (283)
T d2rhwa1 81 --EQRGLVNARAVKGLMDALDIDR-AHLV--GNAMGGATALNFALEYPDRIGKLILMGPGGLGPSMFAPMPMEGIKLLFK 155 (283)
T ss_dssp --SCHHHHHHHHHHHHHHHHTCCC-EEEE--EETHHHHHHHHHHHHCGGGEEEEEEESCSCCCCCSSSCSSCHHHHHHHH
T ss_pred --ccccchhhhhcccccccccccc-cccc--cccchHHHHHHHHHHhhhhcceEEEeCCCcCCcchhhhhhHHHHHHHHH
Confidence 2355678999999999999885 6676 66665 5788899999999999999975433221111000000000000
Q ss_pred hhhhhhHHHHHHHHHh-C-CCccccccccccccccccc-cCCch--hHHHHHHHhcch--hhhhHhhhcCcCCCCCCCcE
Q 022534 164 EFTAQNAIMAERFIEA-G-SPYVLKLDKADVYRLPYLA-SSGPG--FALLEAARKVNF--KDISSRIGAGFSSGSWDKPV 236 (295)
Q Consensus 164 ~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~-~~~~~--~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~P~ 236 (295)
................ . ....... +..+..+.. ...+. ............ .+.... ...+++|+
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------l~~i~~P~ 226 (283)
T d2rhwa1 156 LYAEPSYETLKQMLQVFLYDQSLITE---ELLQGRWEAIQRQPEHLKNFLISAQKAPLSTWDVTAR------LGEIKAKT 226 (283)
T ss_dssp HHHSCCHHHHHHHHHHHCSCGGGCCH---HHHHHHHHHHHHCHHHHHHHHHHHHHSCGGGGCCGGG------GGGCCSCE
T ss_pred HhhhhhhhhHHHHHHHhhcccccCcH---HHHHHHHHHhhhhhhhhhhhhhhhhhhhccccchHHH------HhhCCCCE
Confidence 0000000000000000 0 0000000 000000000 00000 000000000000 001111 12678999
Q ss_pred EEEEeCCCCCCCcchHHHHHhcCCCCeEEEEecCCCCCCCCCChHHHHHHHHHHHHh
Q 022534 237 LVAWGISDKYLPQSVAEEFQKGNPNVVKLQMIEGAGHMPQEDWPEKVVDGLRYFFLN 293 (295)
Q Consensus 237 l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 293 (295)
++|+|++|.+++++.+.++.+.+++ +++++++++||++++|+|++|++.|.+||.+
T Consensus 227 lii~G~~D~~~~~~~~~~~~~~~~~-~~~~~i~~~gH~~~~e~p~~~~~~i~~FLk~ 282 (283)
T d2rhwa1 227 FITWGRDDRFVPLDHGLKLLWNIDD-ARLHVFSKCGHWAQWEHADEFNRLVIDFLRH 282 (283)
T ss_dssp EEEEETTCSSSCTHHHHHHHHHSSS-EEEEEESSCCSCHHHHTHHHHHHHHHHHHHH
T ss_pred EEEEeCCCCCcCHHHHHHHHHhCCC-CEEEEECCCCCchHHhCHHHHHHHHHHHHhC
Confidence 9999999999999999999999987 7999999999999999999999999999974
|
| >d1hkha_ c.69.1.12 (A:) Gamma-lactamase {Aureobacterium sp. [TaxId: 51671]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Gamma-lactamase species: Aureobacterium sp. [TaxId: 51671]
Probab=100.00 E-value=4e-34 Score=241.15 Aligned_cols=254 Identities=21% Similarity=0.297 Sum_probs=158.0
Q ss_pred cEEEEEEEcCCCCCCCceEEEEcCCCCCCccchhhHHHhhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH
Q 022534 20 EYRWFVRETGSADSRLGTIVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEELDK 99 (295)
Q Consensus 20 ~~~~~~~~~g~~~~~~~~vv~lHG~~~~~~~w~~~~~~l~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~l~~ 99 (295)
++++||++.|++ |||||+||+++++..|..+++.|.+++|+|+++|+||||.|+++.. .|+.+++++|+.+
T Consensus 12 ~v~i~y~~~G~g----~~illlHG~~~~~~~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~-----~~~~~~~~~di~~ 82 (279)
T d1hkha_ 12 PIELYYEDQGSG----QPVVLIHGYPLDGHSWERQTRELLAQGYRVITYDRRGFGGSSKVNT-----GYDYDTFAADLHT 82 (279)
T ss_dssp EEEEEEEEESSS----EEEEEECCTTCCGGGGHHHHHHHHHTTEEEEEECCTTSTTSCCCSS-----CCSHHHHHHHHHH
T ss_pred eEEEEEEEEccC----CeEEEECCCCCCHHHHHHHHHHHHHCCCEEEEEechhhCCcccccc-----ccchhhhhhhhhh
Confidence 469999999963 5899999999999999999998866799999999999999997543 3588999999999
Q ss_pred HHHHhCCCCceEEEEecccchH-HHH-HHHHhCcCccceeEEEcCCCCCCCCCchh---hhhhhcccchhhhh--hhHHH
Q 022534 100 LLDVLEVKYPFFLVVQGFLVGS-YGL-TWALKNPSRISKLAILNSPLTASSPLPGL---FQQLRIPLLGEFTA--QNAIM 172 (295)
Q Consensus 100 ~~~~l~~~~~~~lv~~G~~~G~-~~~-~~a~~~p~~v~~lil~~~p~~~~~~~~~~---~~~~~~~~~~~~~~--~~~~~ 172 (295)
+++++++++ ++++ |||+|+ +++ .+|..+|++|+++++++++.......... ........+..... .....
T Consensus 83 ~i~~l~~~~-~~lv--GhS~Gg~~~a~~~a~~~p~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (279)
T d1hkha_ 83 VLETLDLRD-VVLV--GFSMGTGELARYVARYGHERVAKLAFLASLEPFLVQRDDNPEGVPQEVFDGIEAAAKGDRFAWF 159 (279)
T ss_dssp HHHHHTCCS-EEEE--EETHHHHHHHHHHHHHCSTTEEEEEEESCCCSBCBCBTTBTTSBCHHHHHHHHHHHHHCHHHHH
T ss_pred hhhhcCcCc-cccc--cccccccchhhhhccccccccceeEEeeccCCccccchhhhhhhhHHHHHHHHHhhhhhhhhhh
Confidence 999999885 6676 777774 544 45667899999999987643221110000 00000000000000 00000
Q ss_pred ---HHHHHH---hCCCccccccccccccccccccCCchhHHHHHHHhcchhhhhHhhhcCcCCCCCCCcEEEEEeCCCCC
Q 022534 173 ---AERFIE---AGSPYVLKLDKADVYRLPYLASSGPGFALLEAARKVNFKDISSRIGAGFSSGSWDKPVLVAWGISDKY 246 (295)
Q Consensus 173 ---~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~ 246 (295)
...+.. ..........................+..... ...+++.....+. .+++|+++|+|++|.+
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~------~~~~P~l~i~G~~D~~ 232 (279)
T d1hkha_ 160 TDFYKNFYNLDENLGSRISEQAVTGSWNVAIGSAPVAAYAVVPA-WIEDFRSDVEAVR------AAGKPTLILHGTKDNI 232 (279)
T ss_dssp HHHHHHHHTHHHHBTTTBCHHHHHHHHHHHHTSCTTHHHHTHHH-HTCBCHHHHHHHH------HHCCCEEEEEETTCSS
T ss_pred hhhhhhhcccchhhhhhhhhhhhhhhhhhhcccchhhhhhhhhh-hhcccccchhhhc------ccCCceEEEEcCCCCc
Confidence 000000 00000000000000000000000000000000 0111222222221 4589999999999999
Q ss_pred CCcc-hHHHHHhcCCCCeEEEEecCCCCCCCCCChHHHHHHHHHHHHh
Q 022534 247 LPQS-VAEEFQKGNPNVVKLQMIEGAGHMPQEDWPEKVVDGLRYFFLN 293 (295)
Q Consensus 247 ~~~~-~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 293 (295)
++.+ ..+.+.+.+|+ ++++++|++||++++|+|++|++.|++||..
T Consensus 233 ~~~~~~~~~~~~~~p~-~~~~~i~~~gH~~~~e~p~~v~~~i~~fl~k 279 (279)
T d1hkha_ 233 LPIDATARRFHQAVPE-ADYVEVEGAPHGLLWTHADEVNAALKTFLAK 279 (279)
T ss_dssp SCTTTTHHHHHHHCTT-SEEEEETTCCTTHHHHTHHHHHHHHHHHHHC
T ss_pred cCHHHHHHHHHHhCCC-CEEEEECCCCCchHHhCHHHHHHHHHHHHCc
Confidence 9765 56788888887 7999999999999999999999999999963
|
| >d1a8qa_ c.69.1.12 (A:) Bromoperoxidase A1 {Streptomyces aureofaciens [TaxId: 1894]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Bromoperoxidase A1 species: Streptomyces aureofaciens [TaxId: 1894]
Probab=100.00 E-value=2.5e-33 Score=235.64 Aligned_cols=258 Identities=22% Similarity=0.311 Sum_probs=159.5
Q ss_pred eEEe-CcEEEEEEEcCCCCCCCceEEEEcCCCCCCccchhhHHHhhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCCHHHH
Q 022534 15 YIKS-GEYRWFVRETGSADSRLGTIVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEF 93 (295)
Q Consensus 15 ~~~~-~~~~~~~~~~g~~~~~~~~vv~lHG~~~~~~~w~~~~~~l~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~ 93 (295)
||++ +|.+++|++.|++ |||||+||+++++..|..+++.|.++||+|+++|+||||.|+.+.. .++.+++
T Consensus 2 ~~~t~dG~~l~y~~~G~g----~~ivlvHG~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~-----~~~~~~~ 72 (274)
T d1a8qa_ 2 ICTTRDGVEIFYKDWGQG----RPVVFIHGWPLNGDAWQDQLKAVVDAGYRGIAHDRRGHGHSTPVWD-----GYDFDTF 72 (274)
T ss_dssp EEECTTSCEEEEEEECSS----SEEEEECCTTCCGGGGHHHHHHHHHTTCEEEEECCTTSTTSCCCSS-----CCSHHHH
T ss_pred eEECcCCCEEEEEEECCC----CeEEEECCCCCCHHHHHHHHHHHHHCCCEEEEEeCCCCcccccccc-----cccchhh
Confidence 6677 6899999999964 4899999999999999999999987799999999999999997643 3477899
Q ss_pred HHHHHHHHHHhCCCCceEEEEecccch-HHHHHHHH-hCcCccceeEEEcCCCCCCCC---Cchh-----hhhhhcccch
Q 022534 94 HEELDKLLDVLEVKYPFFLVVQGFLVG-SYGLTWAL-KNPSRISKLAILNSPLTASSP---LPGL-----FQQLRIPLLG 163 (295)
Q Consensus 94 ~~~l~~~~~~l~~~~~~~lv~~G~~~G-~~~~~~a~-~~p~~v~~lil~~~p~~~~~~---~~~~-----~~~~~~~~~~ 163 (295)
++|+.+++++++.++ ++++ |||+| .+++.+++ .+|++|++++++++....... .+.. +..+......
T Consensus 73 ~~dl~~~l~~l~~~~-~~lv--GhS~Gg~~~~~~~a~~~p~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (274)
T d1a8qa_ 73 ADDLNDLLTDLDLRD-VTLV--AHSMGGGELARYVGRHGTGRLRSAVLLSAIPPVMIKSDKNPDGVPDEVFDALKNGVLT 149 (274)
T ss_dssp HHHHHHHHHHTTCCS-EEEE--EETTHHHHHHHHHHHHCSTTEEEEEEESCCCSCCBCCSSCTTSBCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhhhh-hccc--ccccccchHHHHHHHhhhccceeEEEEeccCccchhhhhccchhhHHHHHHHHhhhhh
Confidence 999999999999875 6666 67765 56666554 579999999998753321111 1100 0000000000
Q ss_pred hhhhhhHHHHHHHHHhCCCc-cccccccccccccccccCCchhHHHHHHHhcchhhhhHhhhcCcCCCCCCCcEEEEEeC
Q 022534 164 EFTAQNAIMAERFIEAGSPY-VLKLDKADVYRLPYLASSGPGFALLEAARKVNFKDISSRIGAGFSSGSWDKPVLVAWGI 242 (295)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~ 242 (295)
............+.....+. .......+.+. .......-.............+....+ +++++|+++|+|+
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~l------~~i~~Pvlii~G~ 221 (274)
T d1a8qa_ 150 ERSQFWKDTAEGFFSANRPGNKVTQGNKDAFW--YMAMAQTIEGGVRCVDAFGYTDFTEDL------KKFDIPTLVVHGD 221 (274)
T ss_dssp HHHHHHHHHHHHHTTTTSTTCCCCHHHHHHHH--HHHTTSCHHHHHHHHHHHHHCCCHHHH------TTCCSCEEEEEET
T ss_pred hhHHHhhhhhhhhhhccccchhhhhhHHHHHH--HhhhccchhhhhhHHHHhhccchHHHH------HhccceeeeeccC
Confidence 00000000011111110000 00000000000 000000000000000000001111111 3679999999999
Q ss_pred CCCCCCcch-HHHHHhcCCCCeEEEEecCCCCCCCC--CChHHHHHHHHHHHHh
Q 022534 243 SDKYLPQSV-AEEFQKGNPNVVKLQMIEGAGHMPQE--DWPEKVVDGLRYFFLN 293 (295)
Q Consensus 243 ~D~~~~~~~-~~~~~~~~~~~~~~~~i~~~gH~~~~--e~p~~~~~~i~~fl~~ 293 (295)
+|.+++.+. .+.+++.+++ +++++++++||++++ ++|++|++.|.+||+.
T Consensus 222 ~D~~~~~~~~~~~~~~~~~~-~~~~~i~~~gH~~~~~~~~p~~~~~~i~~FL~k 274 (274)
T d1a8qa_ 222 DDQVVPIDATGRKSAQIIPN-AELKVYEGSSHGIAMVPGDKEKFNRDLLEFLNK 274 (274)
T ss_dssp TCSSSCGGGTHHHHHHHSTT-CEEEEETTCCTTTTTSTTHHHHHHHHHHHHHTC
T ss_pred CCCCcCHHHHHHHHHHhCCC-CEEEEECCCCCcccccccCHHHHHHHHHHHHCc
Confidence 999998765 4667788887 799999999999887 5699999999999963
|
| >d1brta_ c.69.1.12 (A:) Bromoperoxidase A2 {Streptomyces aureofaciens [TaxId: 1894]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Bromoperoxidase A2 species: Streptomyces aureofaciens [TaxId: 1894]
Probab=100.00 E-value=1.4e-33 Score=237.34 Aligned_cols=256 Identities=23% Similarity=0.297 Sum_probs=156.9
Q ss_pred CcEEEEEEEcCCCCCCCceEEEEcCCCCCCccchhhHHHhhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH
Q 022534 19 GEYRWFVRETGSADSRLGTIVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEELD 98 (295)
Q Consensus 19 ~~~~~~~~~~g~~~~~~~~vv~lHG~~~~~~~w~~~~~~l~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~l~ 98 (295)
++++|||++.|++ |||||+||+++++..|+.+++.|.++||+|+++|+||||.|++... .++.+++++|+.
T Consensus 11 ~~v~i~y~~~G~G----~~ivllHG~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~-----~~~~~~~~~dl~ 81 (277)
T d1brta_ 11 TSIDLYYEDHGTG----QPVVLIHGFPLSGHSWERQSAALLDAGYRVITYDRRGFGQSSQPTT-----GYDYDTFAADLN 81 (277)
T ss_dssp EEEEEEEEEECSS----SEEEEECCTTCCGGGGHHHHHHHHHTTCEEEEECCTTSTTSCCCSS-----CCSHHHHHHHHH
T ss_pred CcEEEEEEEEccC----CeEEEECCCCCCHHHHHHHHHHHHhCCCEEEEEeCCCCCccccccc-----ccchhhhhhhhh
Confidence 3579999999964 5899999999999999999999987899999999999999986432 358899999999
Q ss_pred HHHHHhCCCCceEEEEecccch-HHHH-HHHHhCcCccceeEEEcCCCCCCCCCchh----h-hhhhcccchhhhhhhHH
Q 022534 99 KLLDVLEVKYPFFLVVQGFLVG-SYGL-TWALKNPSRISKLAILNSPLTASSPLPGL----F-QQLRIPLLGEFTAQNAI 171 (295)
Q Consensus 99 ~~~~~l~~~~~~~lv~~G~~~G-~~~~-~~a~~~p~~v~~lil~~~p~~~~~~~~~~----~-~~~~~~~~~~~~~~~~~ 171 (295)
++++++++++ ++++ |||+| ++++ .+|..+|++|+++++++++.......... . ......+..........
T Consensus 82 ~~l~~l~~~~-~~lv--GhS~G~~~~~~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (277)
T d1brta_ 82 TVLETLDLQD-AVLV--GFSTGTGEVARYVSSYGTARIAKVAFLASLEPFLLKTDDNPDGAAPQEFFDGIVAAVKADRYA 158 (277)
T ss_dssp HHHHHHTCCS-EEEE--EEGGGHHHHHHHHHHHCSTTEEEEEEESCCCSCCBCBTTBTTCSBCHHHHHHHHHHHHHCHHH
T ss_pred hhhhccCccc-cccc--ccccchhhhhHHHHHhhhcccceEEEecCCCcccccchhhhhhhhhhhHHHHHHHhhhccchh
Confidence 9999999885 6676 77776 4544 45678899999999987533211100000 0 00000000000000000
Q ss_pred HHHHHHHhCCC--cccc-ccccccccccccccCCchhHHHHHHHhcchhhhhHhhhcCcCCCCCCCcEEEEEeCCCCCCC
Q 022534 172 MAERFIEAGSP--YVLK-LDKADVYRLPYLASSGPGFALLEAARKVNFKDISSRIGAGFSSGSWDKPVLVAWGISDKYLP 248 (295)
Q Consensus 172 ~~~~~~~~~~~--~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~~ 248 (295)
....+...... .... .......+..+.... .. ......... ......... ...++++|+++|+|++|.+++
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~--~~~~~~~~~--~l~~i~~P~lii~g~~D~~~~ 232 (277)
T d1brta_ 159 FYTGFFNDFYNLDENLGTRISEEAVRNSWNTAA-SG-GFFAAAAAP--TTWYTDFRA--DIPRIDVPALILHGTGDRTLP 232 (277)
T ss_dssp HHHHHHHHHTTHHHHBTTTBCHHHHHHHHHHHH-HS-CHHHHHHGG--GGTTCCCTT--TGGGCCSCEEEEEETTCSSSC
T ss_pred hhhhccccccccchhhhhhhhHHHhhhhhcccc-hh-hhhhhhhhh--hhhhhhHHH--HHHhcCccceeEeecCCCCcC
Confidence 00111100000 0000 000000000000000 00 000000000 000000000 113578999999999999998
Q ss_pred cch-HHHHHhcCCCCeEEEEecCCCCCCCCCChHHHHHHHHHHHHh
Q 022534 249 QSV-AEEFQKGNPNVVKLQMIEGAGHMPQEDWPEKVVDGLRYFFLN 293 (295)
Q Consensus 249 ~~~-~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 293 (295)
.+. .+.+.+.+++ +++++++++||++++|+|++|++.|++||..
T Consensus 233 ~~~~~~~~~~~~~~-~~~~~i~~~gH~~~~e~p~~~~~~i~~fL~k 277 (277)
T d1brta_ 233 IENTARVFHKALPS-AEYVEVEGAPHGLLWTHAEEVNTALLAFLAK 277 (277)
T ss_dssp GGGTHHHHHHHCTT-SEEEEETTCCTTHHHHTHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHhCCC-CEEEEECCCCCchHHhCHHHHHHHHHHHHCc
Confidence 765 5667778887 7999999999999999999999999999963
|
| >d1imja_ c.69.1.23 (A:) Ccg1/TafII250-interacting factor B (Cib) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Ccg1/TafII250-interacting factor B (Cib) domain: Ccg1/TafII250-interacting factor B (Cib) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=5.1e-34 Score=232.95 Aligned_cols=196 Identities=22% Similarity=0.295 Sum_probs=153.9
Q ss_pred eeEEeCcEEEEEEEcCCCC-CCCceEEEEcCCCCCCccchh--hHHHhhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCCH
Q 022534 14 SYIKSGEYRWFVRETGSAD-SRLGTIVFLHGAPSHSYSYRN--VMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTE 90 (295)
Q Consensus 14 ~~~~~~~~~~~~~~~g~~~-~~~~~vv~lHG~~~~~~~w~~--~~~~l~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~ 90 (295)
.+++++|..++|++++++. +.+++|||+||+++++..|.. +++.|+++||+|+++|+||||+|+++.... .++.
T Consensus 9 ~~i~v~G~~i~y~~~~~~~~~~~~~vvllHG~~~~~~~w~~~~~~~~la~~gy~via~D~~G~G~S~~~~~~~---~~~~ 85 (208)
T d1imja_ 9 GTIQVQGQALFFREALPGSGQARFSVLLLHGIRFSSETWQNLGTLHRLAQAGYRAVAIDLPGLGHSKEAAAPA---PIGE 85 (208)
T ss_dssp CCEEETTEEECEEEEECSSSCCSCEEEECCCTTCCHHHHHHHTHHHHHHHTTCEEEEECCTTSGGGTTSCCSS---CTTS
T ss_pred EEEEECCEEEEEEEecCCCCCCCCeEEEECCCCCChhHHhhhHHHHHHHHcCCeEEEeecccccCCCCCCccc---ccch
Confidence 4778999999999987643 457899999999999999986 468898889999999999999999765322 3344
Q ss_pred HHHHHHHHHHHHHhCCCCceEEEEecccch-HHHHHHHHhCcCccceeEEEcCCCCCCCCCchhhhhhhcccchhhhhhh
Q 022534 91 NEFHEELDKLLDVLEVKYPFFLVVQGFLVG-SYGLTWALKNPSRISKLAILNSPLTASSPLPGLFQQLRIPLLGEFTAQN 169 (295)
Q Consensus 91 ~~~~~~l~~~~~~l~~~~~~~lv~~G~~~G-~~~~~~a~~~p~~v~~lil~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (295)
..+++++.++++.++.++ ++++ |||+| .+++.+|.++|++++++|++++ ... . ++.
T Consensus 86 ~~~~~~l~~~~~~l~~~~-~~lv--G~S~Gg~~a~~~a~~~p~~v~~lV~~~p-~~~--------~--------~~~--- 142 (208)
T d1imja_ 86 LAPGSFLAAVVDALELGP-PVVI--SPSLSGMYSLPFLTAPGSQLPGFVPVAP-ICT--------D--------KIN--- 142 (208)
T ss_dssp CCCTHHHHHHHHHHTCCS-CEEE--EEGGGHHHHHHHHTSTTCCCSEEEEESC-SCG--------G--------GSC---
T ss_pred hhhhhhhhhccccccccc-cccc--ccCcHHHHHHHHHHHhhhhcceeeecCc-ccc--------c--------ccc---
Confidence 556788899999999886 4565 77776 5688899999999999998742 110 0 000
Q ss_pred HHHHHHHHHhCCCccccccccccccccccccCCchhHHHHHHHhcchhhhhHhhhcCcCCCCCCCcEEEEEeCCCCCCCc
Q 022534 170 AIMAERFIEAGSPYVLKLDKADVYRLPYLASSGPGFALLEAARKVNFKDISSRIGAGFSSGSWDKPVLVAWGISDKYLPQ 249 (295)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~~~ 249 (295)
.+... .+++|+|+|+|++|++++.
T Consensus 143 -----------------------------------------------~~~~~---------~i~~P~Lii~G~~D~~~~~ 166 (208)
T d1imja_ 143 -----------------------------------------------AANYA---------SVKTPALIVYGDQDPMGQT 166 (208)
T ss_dssp -----------------------------------------------HHHHH---------TCCSCEEEEEETTCHHHHH
T ss_pred -----------------------------------------------ccccc---------ccccccccccCCcCcCCcH
Confidence 00001 4579999999999998764
Q ss_pred chHHHHHhcCCCCeEEEEecCCCCCCCCCChHHHHHHHHHHHHhc
Q 022534 250 SVAEEFQKGNPNVVKLQMIEGAGHMPQEDWPEKVVDGLRYFFLNY 294 (295)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~ 294 (295)
+ .+..+.+++ .++.++++|||.+++|+|++|++.+.+||+++
T Consensus 167 ~--~~~~~~~~~-~~~~~i~~~gH~~~~~~p~~~~~~l~~Fl~~L 208 (208)
T d1imja_ 167 S--FEHLKQLPN-HRVLIMKGAGHPCYLDKPEEWHTGLLDFLQGL 208 (208)
T ss_dssp H--HHHHTTSSS-EEEEEETTCCTTHHHHCHHHHHHHHHHHHHTC
T ss_pred H--HHHHHhCCC-CeEEEECCCCCchhhhCHHHHHHHHHHHHhcC
Confidence 3 355667886 79999999999999999999999999999874
|
| >d1azwa_ c.69.1.7 (A:) Proline iminopeptidase {Xanthomonas campestris, pv. citri [TaxId: 339]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Proline iminopeptidase-like domain: Proline iminopeptidase species: Xanthomonas campestris, pv. citri [TaxId: 339]
Probab=100.00 E-value=5e-33 Score=239.97 Aligned_cols=126 Identities=19% Similarity=0.236 Sum_probs=104.6
Q ss_pred ccceeeEEe-CcEEEEEEEcCCCCCCCceEEEEcCCCCCCccchhhHHHhhhCCCeEEEeCCCCCCCCCCCCCCCCCCCC
Q 022534 10 REYGSYIKS-GEYRWFVRETGSADSRLGTIVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDF 88 (295)
Q Consensus 10 ~~~~~~~~~-~~~~~~~~~~g~~~~~~~~vv~lHG~~~~~~~w~~~~~~l~~~~~~via~Dl~G~G~S~~~~~~~~~~~~ 88 (295)
|+...++++ +|.++||++.|+++ .+||||+||+++++..|......++ .+|+|+++|+||||+|+++.. ...|
T Consensus 10 P~~~~~i~~~dg~~i~y~~~G~~~--g~pvvllHG~~g~~~~~~~~~~~l~-~~~~Vi~~D~rG~G~S~~~~~---~~~~ 83 (313)
T d1azwa_ 10 PYQQGSLKVDDRHTLYFEQCGNPH--GKPVVMLHGGPGGGCNDKMRRFHDP-AKYRIVLFDQRGSGRSTPHAD---LVDN 83 (313)
T ss_dssp CSEEEEEECSSSCEEEEEEEECTT--SEEEEEECSTTTTCCCGGGGGGSCT-TTEEEEEECCTTSTTSBSTTC---CTTC
T ss_pred CCCCCEEEeCCCcEEEEEEecCCC--CCEEEEECCCCCCccchHHHhHHhh-cCCEEEEEeccccCCCCcccc---ccch
Confidence 555667777 57899999999754 3689999999999999998776665 489999999999999997654 3367
Q ss_pred CHHHHHHHHHHHHHHhCCCCceEEEEecccch-HHHHHHHHhCcCccceeEEEcCCC
Q 022534 89 TENEFHEELDKLLDVLEVKYPFFLVVQGFLVG-SYGLTWALKNPSRISKLAILNSPL 144 (295)
Q Consensus 89 ~~~~~~~~l~~~~~~l~~~~~~~lv~~G~~~G-~~~~~~a~~~p~~v~~lil~~~p~ 144 (295)
+++++++|+.++++++++++ ++|+ |||+| .+++.+|.++|++|++++++++..
T Consensus 84 ~~~~~~~dl~~~~~~l~~~~-~~lv--GhS~Gg~ia~~~a~~~p~~v~~lv~~~~~~ 137 (313)
T d1azwa_ 84 TTWDLVADIERLRTHLGVDR-WQVF--GGSWGSTLALAYAQTHPQQVTELVLRGIFL 137 (313)
T ss_dssp CHHHHHHHHHHHHHHTTCSS-EEEE--EETHHHHHHHHHHHHCGGGEEEEEEESCCC
T ss_pred hHHHHHHHHHHHHHhhcccc-ceeE--EecCCcHHHHHHHHHhhhceeeeeEecccc
Confidence 89999999999999999986 5666 67776 468899999999999999986533
|
| >d3c70a1 c.69.1.20 (A:2-257) Hydroxynitrile lyase {Rubber tree (Hevea brasiliensis) [TaxId: 3981]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Hydroxynitrile lyase-like domain: Hydroxynitrile lyase species: Rubber tree (Hevea brasiliensis) [TaxId: 3981]
Probab=100.00 E-value=1.6e-34 Score=239.31 Aligned_cols=244 Identities=17% Similarity=0.107 Sum_probs=152.0
Q ss_pred EEEEcCCCCCCccchhhHHHhhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCceEEEEecc
Q 022534 38 IVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEELDKLLDVLEVKYPFFLVVQGF 117 (295)
Q Consensus 38 vv~lHG~~~~~~~w~~~~~~l~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~~lv~~G~ 117 (295)
.|||||+++++..|+.+++.|+++||+|+++|+||||+|+++.. ..|+++++++++.+++++++..++++++ ||
T Consensus 5 ~vliHG~~~~~~~w~~~~~~L~~~g~~Via~Dl~G~G~S~~~~~----~~~~~~~~~~~l~~~~~~~~~~~~~~lv--Gh 78 (256)
T d3c70a1 5 FVLIHTICHGAWIWHKLKPLLEALGHKVTALDLAASGVDPRQIE----EIGSFDEYSEPLLTFLEALPPGEKVILV--GE 78 (256)
T ss_dssp EEEECCTTCCGGGGTTHHHHHHHTTCEEEEECCTTSTTCSCCGG----GCCSHHHHTHHHHHHHHHSCTTCCEEEE--EE
T ss_pred EEEeCCCCCCHHHHHHHHHHHHhCCCEEEEEcCCCCCCCCCCCC----CCCCHHHHHHHhhhhhhhhccccceeec--cc
Confidence 58999999999999999999988899999999999999997642 2458899999999999988766677777 67
Q ss_pred cch-HHHHHHHHhCcCccceeEEEcCCCCCCCCCchhhhhhh---cccchhhhhhhHHHHHHHHHhCCCccccccccccc
Q 022534 118 LVG-SYGLTWALKNPSRISKLAILNSPLTASSPLPGLFQQLR---IPLLGEFTAQNAIMAERFIEAGSPYVLKLDKADVY 193 (295)
Q Consensus 118 ~~G-~~~~~~a~~~p~~v~~lil~~~p~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (295)
|+| .+++.+|.++|++|+++|+++++.......+....... .......... . +.................
T Consensus 79 S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-----~~~~~~~~~~~~~~~~~~ 152 (256)
T d3c70a1 79 SCGGLNIAIAADKYCEKIAAAVFHNSVLPDTEHCPSYVVDKLMEVFPDWKDTTYF-T-----YTKDGKEITGLKLGFTLL 152 (256)
T ss_dssp TTHHHHHHHHHHHHGGGEEEEEEESCCCCCSSSCTTHHHHHHHHHSCCCTTCEEE-E-----EEETTEEEEEEECCHHHH
T ss_pred chHHHHHHHHhhcCchhhhhhheeccccCCcccchhhHhhhhhhhhhhhhhhHHH-h-----hhccccccchhhhhhhhh
Confidence 776 46788899999999999999765433221111110000 0000000000 0 000000000000000000
Q ss_pred cccccccCCchhHHHHHHHhcc---hhhhhHhhhcCcCCCCCCCcEEEEEeCCCCCCCcchHHHHHhcCCCCeEEEEecC
Q 022534 194 RLPYLASSGPGFALLEAARKVN---FKDISSRIGAGFSSGSWDKPVLVAWGISDKYLPQSVAEEFQKGNPNVVKLQMIEG 270 (295)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~ 270 (295)
+..................... +................++|+++|+|++|.+++++..+.+.+.+|+ ++++++++
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~p~-~~~~~i~~ 231 (256)
T d3c70a1 153 RENLYTLCGPEEYELAKMLTRKGSLFQNILAKRPFFTKEGYGSIKKIYVWTDQDEIFLPEFQLWQIENYKP-DKVYKVEG 231 (256)
T ss_dssp HHHTSTTSCHHHHHHHHHHCCCBCCCHHHHTTSCCCCTTTGGGSCEEEEECTTCSSSCHHHHHHHHHHSCC-SEEEECCS
T ss_pred hhhhhhhcchhhHHHhhhhhhhhhHHHhhhhhcchhhhhhccccceeEEeecCCCCCCHHHHHHHHHHCCC-CEEEEECC
Confidence 0000000000000000000000 0000000000001124579999999999999999999999999997 79999999
Q ss_pred CCCCCCCCChHHHHHHHHHHHHhc
Q 022534 271 AGHMPQEDWPEKVVDGLRYFFLNY 294 (295)
Q Consensus 271 ~gH~~~~e~p~~~~~~i~~fl~~~ 294 (295)
|||++++|+|++|++.|.+|+++|
T Consensus 232 agH~~~~e~P~~~~~~l~~~~~~~ 255 (256)
T d3c70a1 232 GDHKLQLTKTKEIAEILQEVADTY 255 (256)
T ss_dssp CCSCHHHHSHHHHHHHHHHHHHHC
T ss_pred CCCchHHhCHHHHHHHHHHHHHhc
Confidence 999999999999999999999886
|
| >d1xkla_ c.69.1.20 (A:) Salicylic acid-binding protein 2 (SABP2) {Common tobacco (Nicotiana tabacum) [TaxId: 4097]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Hydroxynitrile lyase-like domain: Salicylic acid-binding protein 2 (SABP2) species: Common tobacco (Nicotiana tabacum) [TaxId: 4097]
Probab=100.00 E-value=1.7e-33 Score=232.57 Aligned_cols=246 Identities=18% Similarity=0.113 Sum_probs=153.3
Q ss_pred ceEEEEcCCCCCCccchhhHHHhhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCceEEEEe
Q 022534 36 GTIVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEELDKLLDVLEVKYPFFLVVQ 115 (295)
Q Consensus 36 ~~vv~lHG~~~~~~~w~~~~~~l~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~~lv~~ 115 (295)
++|||+||+++++..|+.+++.|+++||+|+++|+||||+|+++.. ..++.++++.++..+++.....++++++
T Consensus 3 ~~vvllHG~~~~~~~w~~~~~~L~~~g~~vi~~Dl~G~G~S~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~lv-- 76 (258)
T d1xkla_ 3 KHFVLVHGACHGGWSWYKLKPLLEAAGHKVTALDLAASGTDLRKIE----ELRTLYDYTLPLMELMESLSADEKVILV-- 76 (258)
T ss_dssp CEEEEECCTTCCGGGGTTHHHHHHHTTCEEEECCCTTSTTCCCCGG----GCCSHHHHHHHHHHHHHTSCSSSCEEEE--
T ss_pred CcEEEECCCCCCHHHHHHHHHHHHhCCCEEEEecCCCCCCCCCCCC----CCcchHHHHHHHhhhhhccccccccccc--
Confidence 4899999999999999999999998899999999999999997642 2457889999999999998777677777
Q ss_pred cccch-HHHHHHHHhCcCccceeEEEcCCCCCCCCCchhh-hhh-hcccchhhhhhhHHHHHHHHHhCCCccc--cc-cc
Q 022534 116 GFLVG-SYGLTWALKNPSRISKLAILNSPLTASSPLPGLF-QQL-RIPLLGEFTAQNAIMAERFIEAGSPYVL--KL-DK 189 (295)
Q Consensus 116 G~~~G-~~~~~~a~~~p~~v~~lil~~~p~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~-~~ 189 (295)
|||+| .+++.++.++|+++++++++++............ ... ............ .......... .. ..
T Consensus 77 ghS~Gg~va~~~a~~~p~~~~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~ 150 (258)
T d1xkla_ 77 GHSLGGMNLGLAMEKYPQKIYAAVFLAAFMPDSVHNSSFVLEQYNERTPAENWLDTQ------FLPYGSPEEPLTSMFFG 150 (258)
T ss_dssp EETTHHHHHHHHHHHCGGGEEEEEEESCCCCCSSSCTTHHHHHHHHTSCTTTTTTCE------EEECSCTTSCCEEEECC
T ss_pred ccchhHHHHHHHhhhhccccceEEEecccCCCcccchHHHHHHHhhhhhhhhhhhhh------hhhhhhhhhhccccccc
Confidence 56665 5678889999999999999875433221111100 000 000000000000 0000000000 00 00
Q ss_pred cccccccccccCCchhHHHHHHHhcc---hhhhhHhhhcCcCCCCCCCcEEEEEeCCCCCCCcchHHHHHhcCCCCeEEE
Q 022534 190 ADVYRLPYLASSGPGFALLEAARKVN---FKDISSRIGAGFSSGSWDKPVLVAWGISDKYLPQSVAEEFQKGNPNVVKLQ 266 (295)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~ 266 (295)
.......................... ..............+.+++|+++|+|++|.+++++..+.+++.+++ ++++
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~-~~~~ 229 (258)
T d1xkla_ 151 PKFLAHKLYQLCSPEDLALASSLVRPSSLFMEDLSKAKYFTDERFGSVKRVYIVCTEDKGIPEEFQRWQIDNIGV-TEAI 229 (258)
T ss_dssp HHHHHHHTSTTSCHHHHHHHHHHCCCBCCCHHHHHHCCCCCTTTGGGSCEEEEEETTCTTTTHHHHHHHHHHHCC-SEEE
T ss_pred HHHHHHHhhhcccHHHHHHhhhhhhhhhhhhhhhhhhhhcccccccccceeEeeecCCCCCCHHHHHHHHHHCCC-CEEE
Confidence 00000000000000000000000000 0000000000011235679999999999999999999999999987 7999
Q ss_pred EecCCCCCCCCCChHHHHHHHHHHHHhc
Q 022534 267 MIEGAGHMPQEDWPEKVVDGLRYFFLNY 294 (295)
Q Consensus 267 ~i~~~gH~~~~e~p~~~~~~i~~fl~~~ 294 (295)
++++|||++++|+|++|++.|.+|++.|
T Consensus 230 ~i~~~gH~~~~e~P~~~~~~l~e~~~k~ 257 (258)
T d1xkla_ 230 EIKGADHMAMLCEPQKLCASLLEIAHKY 257 (258)
T ss_dssp EETTCCSCHHHHSHHHHHHHHHHHHHHC
T ss_pred EECCCCCchHHhCHHHHHHHHHHHHHhc
Confidence 9999999999999999999999999876
|
| >d1mj5a_ c.69.1.8 (A:) Haloalkane dehalogenase {Sphingomonas paucimobilis, UT26, LinB [TaxId: 13689]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloalkane dehalogenase domain: Haloalkane dehalogenase species: Sphingomonas paucimobilis, UT26, LinB [TaxId: 13689]
Probab=100.00 E-value=2.8e-32 Score=230.48 Aligned_cols=265 Identities=22% Similarity=0.287 Sum_probs=157.1
Q ss_pred eeeEEeCcEEEEEEEcCCCCCCCceEEEEcCCCCCCccchhhHHHhhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCCHHH
Q 022534 13 GSYIKSGEYRWFVRETGSADSRLGTIVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTENE 92 (295)
Q Consensus 13 ~~~~~~~~~~~~~~~~g~~~~~~~~vv~lHG~~~~~~~w~~~~~~l~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~ 92 (295)
..|++++|.++||.+.|++ |+|||+||+++++..|..+++.|++ +|+||++|+||||.|+++.... ...+...+
T Consensus 10 ~~fi~~~g~~i~y~~~G~g----~~vvllHG~~~~~~~~~~~~~~L~~-~~~vi~~Dl~G~G~S~~~~~~~-~~~~~~~~ 83 (298)
T d1mj5a_ 10 KKFIEIKGRRMAYIDEGTG----DPILFQHGNPTSSYLWRNIMPHCAG-LGRLIACDLIGMGDSDKLDPSG-PERYAYAE 83 (298)
T ss_dssp CEEEEETTEEEEEEEESCS----SEEEEECCTTCCGGGGTTTGGGGTT-SSEEEEECCTTSTTSCCCSSCS-TTSSCHHH
T ss_pred CEEEEECCEEEEEEEEcCC----CcEEEECCCCCCHHHHHHHHHHHhc-CCEEEEEeCCCCCCCCCCcccc-ccccccch
Confidence 5799999999999999863 5899999999999999999999985 7999999999999999865432 23444556
Q ss_pred HHHHHHHHHHHhCCCCceEEEEecccch-HHHHHHHHhCcCccceeEEEcCCCCCCCCC--chhhhh----hhcccchhh
Q 022534 93 FHEELDKLLDVLEVKYPFFLVVQGFLVG-SYGLTWALKNPSRISKLAILNSPLTASSPL--PGLFQQ----LRIPLLGEF 165 (295)
Q Consensus 93 ~~~~l~~~~~~l~~~~~~~lv~~G~~~G-~~~~~~a~~~p~~v~~lil~~~p~~~~~~~--~~~~~~----~~~~~~~~~ 165 (295)
...++..++.+....++++++ |||+| .+++.+|.++|++|+++++++++....... ...... .........
T Consensus 84 ~~~~~~~~~~~~~~~~~~~lv--GhS~Gg~va~~~a~~~p~~v~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (298)
T d1mj5a_ 84 HRDYLDALWEALDLGDRVVLV--VHDWGSALGFDWARRHRERVQGIAYMEAIAMPIEWADFPEQDRDLFQAFRSQAGEEL 161 (298)
T ss_dssp HHHHHHHHHHHTTCTTCEEEE--EEHHHHHHHHHHHHHTGGGEEEEEEEEECCSCBCGGGSCGGGHHHHHHHHSTTHHHH
T ss_pred hhhhhccccccccccccCeEE--EecccchhHHHHHHHHHhhhheeeccccccccccchhhhhhhhhhhhhhhhhhhhhh
Confidence 666666666555444457777 67766 568889999999999999886544322110 000000 000000000
Q ss_pred hhhhHHHHHHHHHhCCCccccccccccccccccccCCchhHHHHHHHh-----------cchhhhhHhhhcCcCCCCCCC
Q 022534 166 TAQNAIMAERFIEAGSPYVLKLDKADVYRLPYLASSGPGFALLEAARK-----------VNFKDISSRIGAGFSSGSWDK 234 (295)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~ 234 (295)
...............................+................ ....+.... .+.+++
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~ 235 (298)
T d1mj5a_ 162 VLQDNVFVEQVLPGLILRPLSEAEMAAYREPFLAAGEARRPTLSWPRQIPIAGTPADVVAIARDYAGW------LSESPI 235 (298)
T ss_dssp HTTTCHHHHTHHHHTSSSCCCHHHHHHHHGGGCSSSGGGHHHHHTGGGSCBTTBSHHHHHHHHHHHHH------HTTCCS
T ss_pred hhhhhhhhhhhccccccccchhhhhhhhhhhhccchhhhhhhhhhhhhhhhcchhhhhhhhhhhhhhh------hhhcce
Confidence 000000000000000000000000000000000000000000000000 000011111 126789
Q ss_pred cEEEEEeCCCCCCCcchHHHHHhcCCCCeEEEEecCCCCCCCCCChHHHHHHHHHHHHhc
Q 022534 235 PVLVAWGISDKYLPQSVAEEFQKGNPNVVKLQMIEGAGHMPQEDWPEKVVDGLRYFFLNY 294 (295)
Q Consensus 235 P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~ 294 (295)
|+++++|++|.+.+ .....+.+.+++ ++++++ ++||++++|+|++|++.|++||+++
T Consensus 236 P~l~i~g~~d~~~~-~~~~~~~~~~p~-~~~~~~-~~GH~~~~e~P~~v~~~i~~fl~~~ 292 (298)
T d1mj5a_ 236 PKLFINAEPGALTT-GRMRDFCRTWPN-QTEITV-AGAHFIQEDSPDEIGAAIAAFVRRL 292 (298)
T ss_dssp CEEEEEEEECSSSS-HHHHHHHTTCSS-EEEEEE-EESSCGGGTCHHHHHHHHHHHHHHH
T ss_pred eEEEEecCCCCcCh-HHHHHHHHHCCC-CEEEEe-CCCCchHHhCHHHHHHHHHHHHhhh
Confidence 99999999998764 556778888886 676655 6799999999999999999999874
|
| >d1m33a_ c.69.1.26 (A:) Biotin biosynthesis protein BioH {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Biotin biosynthesis protein BioH domain: Biotin biosynthesis protein BioH species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=1.6e-32 Score=229.21 Aligned_cols=244 Identities=19% Similarity=0.260 Sum_probs=147.3
Q ss_pred EEEEEcCCCCCCCceEEEEcCCCCCCccchhhHHHhhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
Q 022534 23 WFVRETGSADSRLGTIVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEELDKLLD 102 (295)
Q Consensus 23 ~~~~~~g~~~~~~~~vv~lHG~~~~~~~w~~~~~~l~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~l~~~~~ 102 (295)
+||++.|.++ ++|||+||+++++..|..+++.|++ +|+|+++|+||||+|+.... ++.. |+.+.+.
T Consensus 2 i~y~~~G~g~---~~lvllHG~~~~~~~~~~~~~~L~~-~~~vi~~D~~G~G~S~~~~~------~~~~----d~~~~~~ 67 (256)
T d1m33a_ 2 IWWQTKGQGN---VHLVLLHGWGLNAEVWRCIDEELSS-HFTLHLVDLPGFGRSRGFGA------LSLA----DMAEAVL 67 (256)
T ss_dssp CCEEEECCCS---SEEEEECCTTCCGGGGGGTHHHHHT-TSEEEEECCTTSTTCCSCCC------CCHH----HHHHHHH
T ss_pred eEEEEECCCC---CeEEEECCCCCCHHHHHHHHHHHhC-CCEEEEEeCCCCCCcccccc------cccc----ccccccc
Confidence 5788888653 5899999999999999999999985 89999999999999986431 2333 3334444
Q ss_pred HhCCCCceEEEEecccch-HHHHHHHHhCcCccceeEEEcCCC-CCCC-CCchhhhhhhcccchhhhhhhHHHHHHHHHh
Q 022534 103 VLEVKYPFFLVVQGFLVG-SYGLTWALKNPSRISKLAILNSPL-TASS-PLPGLFQQLRIPLLGEFTAQNAIMAERFIEA 179 (295)
Q Consensus 103 ~l~~~~~~~lv~~G~~~G-~~~~~~a~~~p~~v~~lil~~~p~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (295)
.+..+ +++++ |||+| .+++.+|.++|+++++++++++.. .... ..+.........+...+.........++...
T Consensus 68 ~~~~~-~~~l~--GhS~Gg~ia~~~a~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 144 (256)
T d1m33a_ 68 QQAPD-KAIWL--GWSLGGLVASQIALTHPERVRALVTVASSPCFSARDEWPGIKPDVLAGFQQQLSDDQQRTVERFLAL 144 (256)
T ss_dssp TTSCS-SEEEE--EETHHHHHHHHHHHHCGGGEEEEEEESCCSCCBCBTTBCSBCHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred ccccc-ceeee--ecccchHHHHHHHHhCCcccceeeeeecccccccchhhhhhHHHHHHHHHhhhhhhhHHHHHHHhhh
Confidence 44555 46666 67765 568889999999999999886432 2111 1111100000000000000001111122211
Q ss_pred CC--CccccccccccccccccccCCchhHH----HHHHHhcchhhhhHhhhcCcCCCCCCCcEEEEEeCCCCCCCcchHH
Q 022534 180 GS--PYVLKLDKADVYRLPYLASSGPGFAL----LEAARKVNFKDISSRIGAGFSSGSWDKPVLVAWGISDKYLPQSVAE 253 (295)
Q Consensus 180 ~~--~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~~~~~~~ 253 (295)
.. .............. ........... .......++... .+++++|+++|+|++|.++|++.++
T Consensus 145 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~---------l~~i~~P~lii~G~~D~~~p~~~~~ 214 (256)
T d1m33a_ 145 QTMGTETARQDARALKKT-VLALPMPEVDVLNGGLEILKTVDLRQP---------LQNVSMPFLRLYGYLDGLVPRKVVP 214 (256)
T ss_dssp TSTTSTTHHHHHHHHHHH-HHTSCCCCHHHHHHHHHHHHHCCCTTG---------GGGCCSCEEEEEETTCSSSCGGGCC
T ss_pred hhccccchhhHHHHHHHh-hhhcchhhHHHHHhhhhhhcccchHHH---------HHhccCCccccccccCCCCCHHHHH
Confidence 00 00000000000000 00000111111 111111111111 1367899999999999999999999
Q ss_pred HHHhcCCCCeEEEEecCCCCCCCCCChHHHHHHHHHHHHhc
Q 022534 254 EFQKGNPNVVKLQMIEGAGHMPQEDWPEKVVDGLRYFFLNY 294 (295)
Q Consensus 254 ~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~ 294 (295)
.+.+.+|+ +++++++++||++++|+|++|++.|.+|++++
T Consensus 215 ~l~~~~~~-~~~~~i~~~gH~~~~e~p~~~~~~l~~fl~~i 254 (256)
T d1m33a_ 215 MLDKLWPH-SESYIFAKAAHAPFISHPAEFCHLLVALKQRV 254 (256)
T ss_dssp -CTTTCTT-CEEEEETTCCSCHHHHSHHHHHHHHHHHHTTS
T ss_pred HHHHHCCC-CEEEEECCCCCchHHHCHHHHHHHHHHHHHHc
Confidence 99988987 79999999999999999999999999999864
|
| >d1qo7a_ c.69.1.11 (A:) Bacterial epoxide hydrolase {Aspergillus niger [TaxId: 5061]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Epoxide hydrolase domain: Bacterial epoxide hydrolase species: Aspergillus niger [TaxId: 5061]
Probab=100.00 E-value=6.6e-32 Score=240.98 Aligned_cols=274 Identities=15% Similarity=0.159 Sum_probs=161.9
Q ss_pred ceee-EEeCcEEEEEEEcCCCCCCCceEEEEcCCCCCCccchhhHHHhhhCC------CeEEEeCCCCCCCCCCCCCCCC
Q 022534 12 YGSY-IKSGEYRWFVRETGSADSRLGTIVFLHGAPSHSYSYRNVMSQMSDAG------FHCFAPDWLGFGFSDKPEKGYD 84 (295)
Q Consensus 12 ~~~~-~~~~~~~~~~~~~g~~~~~~~~vv~lHG~~~~~~~w~~~~~~l~~~~------~~via~Dl~G~G~S~~~~~~~~ 84 (295)
+..| ++++|++|||...+.+.+..+||||+|||++++..|.++++.|++.| |+||+|||||||.|++|...
T Consensus 82 ~~~f~~~i~G~~iHf~h~~~~~~~~~pLlLlHG~P~s~~~w~~vi~~La~~g~~~~~~f~VIaPDLpG~G~S~~P~~~-- 159 (394)
T d1qo7a_ 82 FPQFTTEIEGLTIHFAALFSEREDAVPIALLHGWPGSFVEFYPILQLFREEYTPETLPFHLVVPSLPGYTFSSGPPLD-- 159 (394)
T ss_dssp SCEEEEEETTEEEEEEEECCSCTTCEEEEEECCSSCCGGGGHHHHHHHHHHCCTTTCCEEEEEECCTTSTTSCCCCSS--
T ss_pred CCCeEEEECCEEEEEEEEeccCCCCCEEEEeccccccHHHHHHHHHhhccccCCcccceeeecccccccCCCCCCCCC--
Confidence 4444 67899999997665444456899999999999999999999999766 99999999999999987532
Q ss_pred CCCCCHHHHHHHHHHHHHHhCCCCceEEEEecccchHHHHHHHHhCcCccceeEEEcCCCCCCCCCchh--hhhhhcccc
Q 022534 85 DFDFTENEFHEELDKLLDVLEVKYPFFLVVQGFLVGSYGLTWALKNPSRISKLAILNSPLTASSPLPGL--FQQLRIPLL 162 (295)
Q Consensus 85 ~~~~~~~~~~~~l~~~~~~l~~~~~~~lv~~G~~~G~~~~~~a~~~p~~v~~lil~~~p~~~~~~~~~~--~~~~~~~~~ 162 (295)
..|+...++.++..+++.++.++. ++++|+ .+|+++..+++.+|+++.+++++.++.......+.. ........+
T Consensus 160 -~~y~~~~~a~~~~~l~~~lg~~~~-~~vg~~-~Gg~v~~~~a~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (394)
T d1qo7a_ 160 -KDFGLMDNARVVDQLMKDLGFGSG-YIIQGG-DIGSFVGRLLGVGFDACKAVHLNLCAMRAPPEGPSIESLSAAEKEGI 236 (394)
T ss_dssp -SCCCHHHHHHHHHHHHHHTTCTTC-EEEEEC-THHHHHHHHHHHHCTTEEEEEESCCCCCSCSSSCCGGGSCHHHHHHH
T ss_pred -CccCHHHHHHHHHHHHhhccCcce-EEEEec-CchhHHHHHHHHhhccccceeEeeecccccccccccccchhhhHHHH
Confidence 256889999999999999998874 455332 355677788889999999998876654332111100 000000000
Q ss_pred -----------hhhhhhhH-HHHHHHHHhCCCccccccccccccccccccCCchhHHHHHHHh-----------cchhh-
Q 022534 163 -----------GEFTAQNA-IMAERFIEAGSPYVLKLDKADVYRLPYLASSGPGFALLEAARK-----------VNFKD- 218 (295)
Q Consensus 163 -----------~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~- 218 (295)
.....+.. ...........+..........+. ...........+...... .....
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~-~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~y~~~ 315 (394)
T d1qo7a_ 237 ARMEKFMTDGLAYAMEHSTRPSTIGHVLSSSPIALLAWIGEKYL-QWVDKPLPSETILEMVSLYWLTESFPRAIHTYRET 315 (394)
T ss_dssp HHHHHHHHHSCHHHHHHHHCHHHHHHHHHHCHHHHHHHHHHHHH-HSCSSCCCHHHHHHHHHHHHHTTCHHHHGGGHHHH
T ss_pred HHHHHHHHhhhhhhhhhhhhhhhhhhhcccccchhhhHHHHHhh-hcccccCCHHHHHHHHHHHhhccccchhHHHHHHH
Confidence 00000000 000000000000000000000000 000000000000000000 00000
Q ss_pred -----hhHhhhcCcCCCCCCCcEEEEEeCCCCCCCcchHHHHHhcCCCCeEEEEecCCCCCCCCCChHHHHHHHHHHHHh
Q 022534 219 -----ISSRIGAGFSSGSWDKPVLVAWGISDKYLPQSVAEEFQKGNPNVVKLQMIEGAGHMPQEDWPEKVVDGLRYFFLN 293 (295)
Q Consensus 219 -----~~~~~~~~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 293 (295)
............+++|||++++|++|...++. .+.+..++..++.++++|||++++|+|++|++.|++|+++
T Consensus 316 ~~~~~~~~~~~~~~~~~~i~vPtlv~~g~~D~~~~p~---~~~~~~~~~~~~~~~~~~GHf~~~E~Pe~~a~~I~~Fl~~ 392 (394)
T d1qo7a_ 316 TPTASAPNGATMLQKELYIHKPFGFSFFPKDLCPVPR---SWIATTGNLVFFRDHAEGGHFAALERPRELKTDLTAFVEQ 392 (394)
T ss_dssp CC---------CTTTTTCEEEEEEEEECTBSSSCCCH---HHHGGGEEEEEEEECSSCBSCHHHHCHHHHHHHHHHHHHH
T ss_pred hhcccccchhhhhccCCcccCCeEEEEeCCCccccHH---HHHHhccCceEEEEcCCcCCchHHhCHHHHHHHHHHHHHH
Confidence 00000000112357899999999999876553 4556666656788999999999999999999999999987
Q ss_pred c
Q 022534 294 Y 294 (295)
Q Consensus 294 ~ 294 (295)
+
T Consensus 393 v 393 (394)
T d1qo7a_ 393 V 393 (394)
T ss_dssp H
T ss_pred h
Confidence 4
|
| >d1wm1a_ c.69.1.7 (A:) Proline aminopeptidase {Serratia marcescens [TaxId: 615]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Proline iminopeptidase-like domain: Proline aminopeptidase species: Serratia marcescens [TaxId: 615]
Probab=99.98 E-value=2.6e-31 Score=225.68 Aligned_cols=126 Identities=17% Similarity=0.248 Sum_probs=105.3
Q ss_pred ccceeeEEe-CcEEEEEEEcCCCCCCCceEEEEcCCCCCCccchhhHHHhhhCCCeEEEeCCCCCCCCCCCCCCCCCCCC
Q 022534 10 REYGSYIKS-GEYRWFVRETGSADSRLGTIVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDF 88 (295)
Q Consensus 10 ~~~~~~~~~-~~~~~~~~~~g~~~~~~~~vv~lHG~~~~~~~w~~~~~~l~~~~~~via~Dl~G~G~S~~~~~~~~~~~~ 88 (295)
|+...|+++ +|.+++|++.|+++ .||||||||+++++..|..++..|++ +|+||++|+||||+|+++.. ...|
T Consensus 10 p~~~~~v~~~dG~~i~y~~~G~~~--g~pvvllHG~~~~~~~w~~~~~~l~~-~~~vi~~D~rG~G~S~~~~~---~~~~ 83 (313)
T d1wm1a_ 10 AYDSGWLDTGDGHRIYWELSGNPN--GKPAVFIHGGPGGGISPHHRQLFDPE-RYKVLLFDQRGCGRSRPHAS---LDNN 83 (313)
T ss_dssp CSEEEEEECSSSCEEEEEEEECTT--SEEEEEECCTTTCCCCGGGGGGSCTT-TEEEEEECCTTSTTCBSTTC---CTTC
T ss_pred CCcCCEEEeCCCcEEEEEEecCCC--CCeEEEECCCCCcccchHHHHHHhhc-CCEEEEEeCCCccccccccc---cccc
Confidence 445677887 58999999999764 46899999999999999999988875 89999999999999987653 2356
Q ss_pred CHHHHHHHHHHHHHHhCCCCceEEEEecccch-HHHHHHHHhCcCccceeEEEcCCC
Q 022534 89 TENEFHEELDKLLDVLEVKYPFFLVVQGFLVG-SYGLTWALKNPSRISKLAILNSPL 144 (295)
Q Consensus 89 ~~~~~~~~l~~~~~~l~~~~~~~lv~~G~~~G-~~~~~~a~~~p~~v~~lil~~~p~ 144 (295)
+...+.+|+.++++++++.+ ++++ |||+| .++..+|..+|++|+++++++.+.
T Consensus 84 ~~~~~~~d~~~~~~~~~~~~-~~~v--g~s~g~~~~~~~a~~~~~~v~~~v~~~~~~ 137 (313)
T d1wm1a_ 84 TTWHLVADIERLREMAGVEQ-WLVF--GGSWGSTLALAYAQTHPERVSEMVLRGIFT 137 (313)
T ss_dssp SHHHHHHHHHHHHHHTTCSS-EEEE--EETHHHHHHHHHHHHCGGGEEEEEEESCCC
T ss_pred chhhHHHHHHhhhhccCCCc-ceeE--eeecCCchhhHHHHHHhhhheeeeeccccc
Confidence 78899999999999999886 5666 66665 567888999999999999886544
|
| >d1r3da_ c.69.1.35 (A:) Hypothetical protein VC1974 {Vibrio cholerae [TaxId: 666]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Hypothetical protein VC1974 domain: Hypothetical protein VC1974 species: Vibrio cholerae [TaxId: 666]
Probab=99.96 E-value=4.6e-29 Score=206.30 Aligned_cols=250 Identities=13% Similarity=0.117 Sum_probs=134.0
Q ss_pred CcEEEEEEEcCCCCCCCceEEEEcCCCCCCccchhhHHHhhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH
Q 022534 19 GEYRWFVRETGSADSRLGTIVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEELD 98 (295)
Q Consensus 19 ~~~~~~~~~~g~~~~~~~~vv~lHG~~~~~~~w~~~~~~l~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~l~ 98 (295)
.+.++||...+. .+|+|||+||+++++..|..+++.|++.||+|+++|+||||+|+.+... .+.......+..
T Consensus 3 ~~~~lh~~~~~~---~~P~ivllHG~~~~~~~~~~~~~~L~~~g~~vi~~Dl~G~G~s~~~~~~----~~~~~~~~~~~~ 75 (264)
T d1r3da_ 3 LSNQLHFAKPTA---RTPLVVLVHGLLGSGADWQPVLSHLARTQCAALTLDLPGHGTNPERHCD----NFAEAVEMIEQT 75 (264)
T ss_dssp CCEEEESSCCBT---TBCEEEEECCTTCCGGGGHHHHHHHTTSSCEEEEECCTTCSSCC-----------CHHHHHHHHH
T ss_pred cCCeEEEcCCCC---CCCeEEEeCCCCCCHHHHHHHHHHHHhCCCEEEEEeccccccccccccc----ccchhhhhhhhc
Confidence 456788755443 3578999999999999999999999877999999999999999875432 122222333333
Q ss_pred HHHHHhCCCCceEEEEecccch-HHHHHHHHhCcCccceeEEEcCCCCCCCCCchhhhhhhcccchhhh---hhh--HHH
Q 022534 99 KLLDVLEVKYPFFLVVQGFLVG-SYGLTWALKNPSRISKLAILNSPLTASSPLPGLFQQLRIPLLGEFT---AQN--AIM 172 (295)
Q Consensus 99 ~~~~~l~~~~~~~lv~~G~~~G-~~~~~~a~~~p~~v~~lil~~~p~~~~~~~~~~~~~~~~~~~~~~~---~~~--~~~ 172 (295)
.+....+ .++++++ |||+| .++..+|.++|+++.+++++..+....................... ... ...
T Consensus 76 ~~~~~~~-~~~~~lv--GhS~Gg~ia~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (264)
T d1r3da_ 76 VQAHVTS-EVPVILV--GYSLGGRLIMHGLAQGAFSRLNLRGAIIEGGHFGLQENEEKAARWQHDQQWAQRFSQQPIEHV 152 (264)
T ss_dssp HHTTCCT-TSEEEEE--EETHHHHHHHHHHHHTTTTTSEEEEEEEESCCCCCCSHHHHHHHHHHHHHHHHHHHHSCHHHH
T ss_pred ccccccc-cCceeee--eecchHHHHHHHHHhCchhccccccccccCCCccccchhhhhhhhhhhhhhhhhhhhhhhhhh
Confidence 3333333 3457777 66765 5688889999999999887654332221111111000000000000 000 000
Q ss_pred HHHHHHhCCCccccccccccc-cccccccCCchhHHHHHHHhc---chhhhhHhhhcCcCCCCCCCcEEEEEeCCCCCCC
Q 022534 173 AERFIEAGSPYVLKLDKADVY-RLPYLASSGPGFALLEAARKV---NFKDISSRIGAGFSSGSWDKPVLVAWGISDKYLP 248 (295)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~~ 248 (295)
...+. ............. ..................... ........+ ..+++|+++|+|++|+.+
T Consensus 153 ~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l------~~~~~p~l~i~G~~D~~~- 222 (264)
T d1r3da_ 153 LSDWY---QQAVFSSLNHEQRQTLIAQRSANLGSSVAHMLLATSLAKQPYLLPAL------QALKLPIHYVCGEQDSKF- 222 (264)
T ss_dssp HHHHT---TSGGGTTCCHHHHHHHHHHHTTSCHHHHHHHHHHTCGGGCCCCHHHH------HTCSSCEEEEEETTCHHH-
T ss_pred hhhhh---hhhhhcccchHHHHHHHHHHhhhhhhhhHHhhhhccccccccchhhh------hccCcceEEEEeCCcHHH-
Confidence 00000 0000000000000 000000000000000000000 000011111 256899999999999643
Q ss_pred cchHHHHHhcCCCCeEEEEecCCCCCCCCCChHHHHHHHHHHHHhc
Q 022534 249 QSVAEEFQKGNPNVVKLQMIEGAGHMPQEDWPEKVVDGLRYFFLNY 294 (295)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~ 294 (295)
..+.+ .++ ++++++++|||++++|+|++|++.|++||+.+
T Consensus 223 ----~~~~~-~~~-~~~~~i~~~gH~~~~e~P~~~~~~i~~fl~~l 262 (264)
T d1r3da_ 223 ----QQLAE-SSG-LSYSQVAQAGHNVHHEQPQAFAKIVQAMIHSI 262 (264)
T ss_dssp ----HHHHH-HHC-SEEEEETTCCSCHHHHCHHHHHHHHHHHHHHH
T ss_pred ----HHHHh-cCC-CeEEEECCCCCchHHHCHHHHHHHHHHHHHhc
Confidence 23333 244 69999999999999999999999999999874
|
| >d1k8qa_ c.69.1.6 (A:) Gastric lipase {Dog (Canis familiaris) [TaxId: 9615]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Gastric lipase domain: Gastric lipase species: Dog (Canis familiaris) [TaxId: 9615]
Probab=99.95 E-value=2.2e-26 Score=201.46 Aligned_cols=256 Identities=15% Similarity=0.180 Sum_probs=143.8
Q ss_pred CCCceEEEEcCCCCCCccchh------hHHHhhhCCCeEEEeCCCCCCCCCCCCCCC----CCCCCCHH-----HHHHHH
Q 022534 33 SRLGTIVFLHGAPSHSYSYRN------VMSQMSDAGFHCFAPDWLGFGFSDKPEKGY----DDFDFTEN-----EFHEEL 97 (295)
Q Consensus 33 ~~~~~vv~lHG~~~~~~~w~~------~~~~l~~~~~~via~Dl~G~G~S~~~~~~~----~~~~~~~~-----~~~~~l 97 (295)
.++|+|||+||+++++..|.. ++..|+++||+|+++|+||||.|+++.... ....++.+ ++.+++
T Consensus 56 ~~~~~vlllHG~~~~~~~~~~~~~~~sla~~L~~~Gy~V~~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~i 135 (377)
T d1k8qa_ 56 GRRPVAFLQHGLLASATNWISNLPNNSLAFILADAGYDVWLGNSRGNTWARRNLYYSPDSVEFWAFSFDEMAKYDLPATI 135 (377)
T ss_dssp TTCCEEEEECCTTCCGGGGSSSCTTTCHHHHHHHTTCEEEECCCTTSTTSCEESSSCTTSTTTTCCCHHHHHHTHHHHHH
T ss_pred CCCCeEEEECCCccchhHHhhcCccchHHHHHHHCCCEEEEEcCCCCCCCCCCCCCCCcchhhccCCHHHHhhhhHHHHH
Confidence 446899999999999999954 677888889999999999999998643211 11223333 455667
Q ss_pred HHHHHHhCCCCceEEEEecccchH-HHHHHHHhCcCccceeEEEcCCC--CCCCCCchhhhhhhc-c-------------
Q 022534 98 DKLLDVLEVKYPFFLVVQGFLVGS-YGLTWALKNPSRISKLAILNSPL--TASSPLPGLFQQLRI-P------------- 160 (295)
Q Consensus 98 ~~~~~~l~~~~~~~lv~~G~~~G~-~~~~~a~~~p~~v~~lil~~~p~--~~~~~~~~~~~~~~~-~------------- 160 (295)
..+++.++.++ ++++ |||+|+ +++.+|..+|+++++++++..+. ............... .
T Consensus 136 ~~i~~~~g~~~-v~lv--GhS~GG~ia~~~a~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 212 (377)
T d1k8qa_ 136 DFILKKTGQDK-LHYV--GHSQGTTIGFIAFSTNPKLAKRIKTFYALAPVATVKYTETLINKLMLVPSFLFKLIFGNKIF 212 (377)
T ss_dssp HHHHHHHCCSC-EEEE--EETHHHHHHHHHHHHCHHHHTTEEEEEEESCCSCCSSCCSGGGGGGTSCHHHHHHHSCSSEE
T ss_pred HHHHHHcCCCC-EEEE--EecchHHHHHHHHHhhhhhhhhceeEeeccccccccchhhHHHHHHhcchhhhhhhhhhhhc
Confidence 77777778775 6676 777765 67888999999999888764322 111111000000000 0
Q ss_pred cchhhhhhh-----------HHHHHHHH--HhC-CCccccccccccccccccccCCc-hhH---HHHHHHhcchh-----
Q 022534 161 LLGEFTAQN-----------AIMAERFI--EAG-SPYVLKLDKADVYRLPYLASSGP-GFA---LLEAARKVNFK----- 217 (295)
Q Consensus 161 ~~~~~~~~~-----------~~~~~~~~--~~~-~~~~~~~~~~~~~~~~~~~~~~~-~~~---~~~~~~~~~~~----- 217 (295)
......... ........ ... ....+...... +......... ... +........+.
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (377)
T d1k8qa_ 213 YPHHFFDQFLATEVCSRETVDLLCSNALFIICGFDTMNLNMSRLD--VYLSHNPAGTSVQNVLHWSQAVKSGKFQAFDWG 290 (377)
T ss_dssp SCCCHHHHHHHHHTTTBTTTHHHHHHHHHHHHCCCGGGSCGGGHH--HHHTTCCCCEEHHHHHHHHHHHHHCSCBCCCCS
T ss_pred cchhHHHHhhhhhhcchhhhhHHHHhhhhhhcCCCcccccHHHhh--hhhhcccccchHHHHHHHHHHHhcCcchhccch
Confidence 000000000 00000000 000 00000000000 0000000000 000 00101000000
Q ss_pred hhhHhhh-------cCcCCCCCCCcEEEEEeCCCCCCCcchHHHHHhcCCCCeEEEEecCCCCC---CCCCChHHHHHHH
Q 022534 218 DISSRIG-------AGFSSGSWDKPVLVAWGISDKYLPQSVAEEFQKGNPNVVKLQMIEGAGHM---PQEDWPEKVVDGL 287 (295)
Q Consensus 218 ~~~~~~~-------~~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~---~~~e~p~~~~~~i 287 (295)
....... .....++++||+|+|+|++|.+++++.++.+.+.+|+..+.++++++||+ .-.+.|++|+..|
T Consensus 291 ~~~~~~~~~~~~~~~~~~l~~i~vPvL~i~G~~D~~~~~~~~~~l~~~lp~~~~~~~i~~~GH~d~~~~~~a~~~v~~~I 370 (377)
T d1k8qa_ 291 SPVQNMMHYHQSMPPYYNLTDMHVPIAVWNGGNDLLADPHDVDLLLSKLPNLIYHRKIPPYNHLDFIWAMDAPQAVYNEI 370 (377)
T ss_dssp SHHHHHHHHSSSSCCBCCGGGCCSCEEEEEETTCSSSCHHHHHHHHTTCTTEEEEEEETTCCTTHHHHCTTHHHHTHHHH
T ss_pred hhhhhhhhhcccCchhhhHhhCCCCEEEEEeCCCCccCHHHHHHHHHHCCCCeEEEEeCCCCCcchhhccchHHHHHHHH
Confidence 0000000 00112367899999999999999999999999999985688999999997 3457799999999
Q ss_pred HHHHHh
Q 022534 288 RYFFLN 293 (295)
Q Consensus 288 ~~fl~~ 293 (295)
.+||++
T Consensus 371 ~~fl~~ 376 (377)
T d1k8qa_ 371 VSMMGT 376 (377)
T ss_dssp HHHHHT
T ss_pred HHHHhc
Confidence 999975
|
| >d1pjaa_ c.69.1.13 (A:) Palmitoyl protein thioesterase 2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterases domain: Palmitoyl protein thioesterase 2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.94 E-value=2.7e-27 Score=196.66 Aligned_cols=101 Identities=17% Similarity=0.208 Sum_probs=86.4
Q ss_pred ceEEEEcCCCCCCccchhhHHHhhhC--CCeEEEeCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCceEEE
Q 022534 36 GTIVFLHGAPSHSYSYRNVMSQMSDA--GFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEELDKLLDVLEVKYPFFLV 113 (295)
Q Consensus 36 ~~vv~lHG~~~~~~~w~~~~~~l~~~--~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~~lv 113 (295)
+|||||||+++++..|+.+++.|.+. +|+|+++|+||||.|+++. .|+.+++++++.+++++++ + +++|+
T Consensus 3 ~PvvllHG~~~~~~~~~~~~~~l~~~~~~~~v~~~d~~G~g~S~~~~------~~~~~~~~~~l~~~l~~l~-~-~~~lv 74 (268)
T d1pjaa_ 3 KPVIVVHGLFDSSYSFRHLLEYINETHPGTVVTVLDLFDGRESLRPL------WEQVQGFREAVVPIMAKAP-Q-GVHLI 74 (268)
T ss_dssp CCEEEECCTTCCGGGGHHHHHHHHHHSTTCCEEECCSSCSGGGGSCH------HHHHHHHHHHHHHHHHHCT-T-CEEEE
T ss_pred CCEEEECCCCCCHHHHHHHHHHHHhhCCCeEEEEeCCCCCCCCCCcc------ccCHHHHHHHHHHHHhccC-C-eEEEE
Confidence 58999999999999999999999753 7999999999999999753 3578899999999999997 5 57777
Q ss_pred Eecccch-HHHHHHHHhCcC-ccceeEEEcCCCCC
Q 022534 114 VQGFLVG-SYGLTWALKNPS-RISKLAILNSPLTA 146 (295)
Q Consensus 114 ~~G~~~G-~~~~~~a~~~p~-~v~~lil~~~p~~~ 146 (295)
|||+| .+++.+|.++|+ +|++++++++|...
T Consensus 75 --GhS~GG~ia~~~a~~~p~~~v~~lvl~~~~~~~ 107 (268)
T d1pjaa_ 75 --CYSQGGLVCRALLSVMDDHNVDSFISLSSPQMG 107 (268)
T ss_dssp --EETHHHHHHHHHHHHCTTCCEEEEEEESCCTTC
T ss_pred --ccccHHHHHHHHHHHCCccccceEEEECCCCcc
Confidence 67765 578899999998 69999999876543
|
| >d1tqha_ c.69.1.29 (A:) Carboxylesterase Est {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase/lipase domain: Carboxylesterase Est species: Bacillus stearothermophilus [TaxId: 1422]
Probab=99.94 E-value=3.8e-26 Score=186.05 Aligned_cols=221 Identities=15% Similarity=0.254 Sum_probs=133.0
Q ss_pred ceEEEEcCCCCCCccchhhHHHhhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH---HHHhCCCCceEE
Q 022534 36 GTIVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEELDKL---LDVLEVKYPFFL 112 (295)
Q Consensus 36 ~~vv~lHG~~~~~~~w~~~~~~l~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~l~~~---~~~l~~~~~~~l 112 (295)
++|||+||+++++..|..+++.|+++||+|+++|+||||.|..+.... ...+...++..+ ++..+.+ ++++
T Consensus 12 ~~vvliHG~~~~~~~~~~l~~~L~~~G~~v~~~D~~G~G~s~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~-~~~l 85 (242)
T d1tqha_ 12 RAVLLLHGFTGNSADVRMLGRFLESKGYTCHAPIYKGHGVPPEELVHT-----GPDDWWQDVMNGYEFLKNKGYE-KIAV 85 (242)
T ss_dssp CEEEEECCTTCCTHHHHHHHHHHHHTTCEEEECCCTTSSSCHHHHTTC-----CHHHHHHHHHHHHHHHHHHTCC-CEEE
T ss_pred CeEEEECCCCCCHHHHHHHHHHHHHCCCEEEEEeCCCCcccccccccc-----chhHHHHHHHHHHhhhhhcccC-ceEE
Confidence 489999999999999999999999889999999999999998643221 333444444433 4455555 4666
Q ss_pred EEecccchH-HHHHHHHhCcCccceeEEEcCCCCCCCCCchhhhhhhcccchhhhhhhHHHHHHHHHh-CCCcccccccc
Q 022534 113 VVQGFLVGS-YGLTWALKNPSRISKLAILNSPLTASSPLPGLFQQLRIPLLGEFTAQNAIMAERFIEA-GSPYVLKLDKA 190 (295)
Q Consensus 113 v~~G~~~G~-~~~~~a~~~p~~v~~lil~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 190 (295)
+ |||+|+ ++..++.++|.. .+++++++...... ....... ..... .+... .... .....
T Consensus 86 ~--G~S~Gg~~~~~~~~~~~~~--~~~~~~~~~~~~~~-~~~~~~~-~~~~~-----------~~~~~~~~~~--~~~~~ 146 (242)
T d1tqha_ 86 A--GLSLGGVFSLKLGYTVPIE--GIVTMCAPMYIKSE-ETMYEGV-LEYAR-----------EYKKREGKSE--EQIEQ 146 (242)
T ss_dssp E--EETHHHHHHHHHHTTSCCS--CEEEESCCSSCCCH-HHHHHHH-HHHHH-----------HHHHHHTCCH--HHHHH
T ss_pred E--EcchHHHHhhhhcccCccc--ccccccccccccch-hHHHHHH-HHHHH-----------HHhhhccchh--hhHHH
Confidence 6 667664 567777888865 35555544432211 0000000 00000 00000 0000 00000
Q ss_pred ccccccccccCCc-hhHHHHHHHhcchhhhhHhhhcCcCCCCCCCcEEEEEeCCCCCCCcchHHHHHhcCCC-CeEEEEe
Q 022534 191 DVYRLPYLASSGP-GFALLEAARKVNFKDISSRIGAGFSSGSWDKPVLVAWGISDKYLPQSVAEEFQKGNPN-VVKLQMI 268 (295)
Q Consensus 191 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~-~~~~~~i 268 (295)
.... ....... ........ ...... ...+++|+|+++|++|.+++++.++.+++.++. +++++++
T Consensus 147 ~~~~--~~~~~~~~~~~~~~~~-----~~~~~~------~~~~~~p~lii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~ 213 (242)
T d1tqha_ 147 EMEK--FKQTPMKTLKALQELI-----ADVRDH------LDLIYAPTFVVQARHDEMINPDSANIIYNEIESPVKQIKWY 213 (242)
T ss_dssp HHHH--HTTSCCTTHHHHHHHH-----HHHHHT------GGGCCSCEEEEEETTCSSSCTTHHHHHHHHCCCSSEEEEEE
T ss_pred HHhh--hhhhccchhhcccccc-----cccccc------cceeccccceeecccCCccCHHHHHHHHHHcCCCCcEEEEE
Confidence 0000 0000000 00000000 001111 125689999999999999999999999887642 4799999
Q ss_pred cCCCCCCCCC-ChHHHHHHHHHHHHhc
Q 022534 269 EGAGHMPQED-WPEKVVDGLRYFFLNY 294 (295)
Q Consensus 269 ~~~gH~~~~e-~p~~~~~~i~~fl~~~ 294 (295)
+++||++++| +|+++++.|.+||+++
T Consensus 214 ~~~gH~~~~~~~~~~~~~~i~~Fl~~l 240 (242)
T d1tqha_ 214 EQSGHVITLDQEKDQLHEDIYAFLESL 240 (242)
T ss_dssp TTCCSSGGGSTTHHHHHHHHHHHHHHS
T ss_pred CCCCCcCccccCHHHHHHHHHHHHHhC
Confidence 9999999887 5999999999999875
|
| >d1thta_ c.69.1.13 (A:) Myristoyl-ACP-specific thioesterase {Vibrio harveyi [TaxId: 669]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterases domain: Myristoyl-ACP-specific thioesterase species: Vibrio harveyi [TaxId: 669]
Probab=99.91 E-value=1.6e-22 Score=173.48 Aligned_cols=221 Identities=14% Similarity=0.110 Sum_probs=130.4
Q ss_pred CcEEEEEEEcCC---CCCCCceEEEEcCCCCCCccchhhHHHhhhCCCeEEEeCCCCC-CCCCCCCCCCCCCCCCHHHHH
Q 022534 19 GEYRWFVRETGS---ADSRLGTIVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGF-GFSDKPEKGYDDFDFTENEFH 94 (295)
Q Consensus 19 ~~~~~~~~~~g~---~~~~~~~vv~lHG~~~~~~~w~~~~~~l~~~~~~via~Dl~G~-G~S~~~~~~~~~~~~~~~~~~ 94 (295)
+|..+++..+-+ .+.++++||++||++++...|..++++|+++||+|+++|+||| |.|++... .++..+..
T Consensus 13 dg~~l~~w~~~p~~~~~~~~~~Vvi~HG~~~~~~~~~~~a~~L~~~G~~Vi~~D~rGh~G~S~g~~~-----~~~~~~~~ 87 (302)
T d1thta_ 13 NGQELHVWETPPKENVPFKNNTILIASGFARRMDHFAGLAEYLSTNGFHVFRYDSLHHVGLSSGSID-----EFTMTTGK 87 (302)
T ss_dssp TTEEEEEEEECCCTTSCCCSCEEEEECTTCGGGGGGHHHHHHHHTTTCCEEEECCCBCC-------------CCCHHHHH
T ss_pred CCCEEEEEEecCcCCCCCCCCEEEEeCCCcchHHHHHHHHHHHHHCCCEEEEecCCCCCCCCCCccc-----CCCHHHHH
Confidence 688888877643 2234678999999999999999999999999999999999998 88876422 34677788
Q ss_pred HHHHHHHHHh---CCCCceEEEEecccchH-HHHHHHHhCcCccceeEEEcCCCCCCCCCchhhhhhhcccchhhhhhhH
Q 022534 95 EELDKLLDVL---EVKYPFFLVVQGFLVGS-YGLTWALKNPSRISKLAILNSPLTASSPLPGLFQQLRIPLLGEFTAQNA 170 (295)
Q Consensus 95 ~~l~~~~~~l---~~~~~~~lv~~G~~~G~-~~~~~a~~~p~~v~~lil~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (295)
.|+.++++.+ +.+ ++.++ |||+|+ +++.+|.. .+++++|+.+ |.... ....... .........
T Consensus 88 ~dl~~vi~~l~~~~~~-~i~lv--G~SmGG~ial~~A~~--~~v~~li~~~-g~~~~---~~~~~~~-~~~~~~~~~--- 154 (302)
T d1thta_ 88 NSLCTVYHWLQTKGTQ-NIGLI--AASLSARVAYEVISD--LELSFLITAV-GVVNL---RDTLEKA-LGFDYLSLP--- 154 (302)
T ss_dssp HHHHHHHHHHHHTTCC-CEEEE--EETHHHHHHHHHTTT--SCCSEEEEES-CCSCH---HHHHHHH-HSSCGGGSC---
T ss_pred HHHHHHHHhhhccCCc-eeEEE--EEchHHHHHHHHhcc--cccceeEeec-ccccH---HHHHHHH-Hhhccchhh---
Confidence 8888777766 444 46676 777765 45555543 4578888764 33211 0000000 000000000
Q ss_pred HHHHHHHHhCCCccccccccccccccccccCCchhHHHHHHHhcc---hhhhhHhhhcCcCCCCCCCcEEEEEeCCCCCC
Q 022534 171 IMAERFIEAGSPYVLKLDKADVYRLPYLASSGPGFALLEAARKVN---FKDISSRIGAGFSSGSWDKPVLVAWGISDKYL 247 (295)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~ 247 (295)
. ...+...... +. ......+........ .......+ .++++|+|+++|++|.++
T Consensus 155 ------~-~~~~~~~~~~-----~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~------~~i~~PvLii~G~~D~~V 211 (302)
T d1thta_ 155 ------I-DELPNDLDFE-----GH-----KLGSEVFVRDCFEHHWDTLDSTLDKV------ANTSVPLIAFTANNDDWV 211 (302)
T ss_dssp ------G-GGCCSEEEET-----TE-----EEEHHHHHHHHHHTTCSSHHHHHHHH------TTCCSCEEEEEETTCTTS
T ss_pred ------h-hhcccccccc-----cc-----chhhHHHHHHHHHhHHHHHHHHHHHH------hhcCCCEEEEEeCCCCcc
Confidence 0 0000000000 00 000011111111110 11112222 378999999999999999
Q ss_pred CcchHHHHHhcCCC-CeEEEEecCCCCCCCCCChH
Q 022534 248 PQSVAEEFQKGNPN-VVKLQMIEGAGHMPQEDWPE 281 (295)
Q Consensus 248 ~~~~~~~~~~~~~~-~~~~~~i~~~gH~~~~e~p~ 281 (295)
+++.+.++.+.++. .+++++++|++|.+. |+|.
T Consensus 212 ~~~~~~~l~~~i~s~~~kl~~~~g~~H~l~-e~~~ 245 (302)
T d1thta_ 212 KQEEVYDMLAHIRTGHCKLYSLLGSSHDLG-ENLV 245 (302)
T ss_dssp CHHHHHHHHTTCTTCCEEEEEETTCCSCTT-SSHH
T ss_pred CHHHHHHHHHhCCCCCceEEEecCCCcccc-cChH
Confidence 99999999988753 589999999999864 5554
|
| >d1l7aa_ c.69.1.25 (A:) Cephalosporin C deacetylase {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetyl xylan esterase-like domain: Cephalosporin C deacetylase species: Bacillus subtilis [TaxId: 1423]
Probab=99.85 E-value=4.3e-20 Score=157.75 Aligned_cols=233 Identities=13% Similarity=0.053 Sum_probs=129.3
Q ss_pred eCcEEEEEEEcCC-CCCCCceEEEEcCCCCCCccchhhHHHhhhCCCeEEEeCCCCCCCCCCCCCCCCCCCC--------
Q 022534 18 SGEYRWFVRETGS-ADSRLGTIVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDF-------- 88 (295)
Q Consensus 18 ~~~~~~~~~~~g~-~~~~~~~vv~lHG~~~~~~~w~~~~~~l~~~~~~via~Dl~G~G~S~~~~~~~~~~~~-------- 88 (295)
.+|.+++..-..+ +..+.|+||++||++++...|...+..|+++||.|+++|+||||.|+.+........+
T Consensus 64 ~dg~~i~~~l~~P~~~~~~P~vv~~HG~~~~~~~~~~~~~~la~~Gy~vi~~D~rG~G~s~~~~~~~~~~~~~~~~~~~~ 143 (318)
T d1l7aa_ 64 FGNARITGWYAVPDKEGPHPAIVKYHGYNASYDGEIHEMVNWALHGYATFGMLVRGQQRSEDTSISPHGHALGWMTKGIL 143 (318)
T ss_dssp GGGEEEEEEEEEESSCSCEEEEEEECCTTCCSGGGHHHHHHHHHTTCEEEEECCTTTSSSCCCCCCSSCCSSSSTTTTTT
T ss_pred CCCcEEEEEEEecCCCCCceEEEEecCCCCCccchHHHHHHHHHCCCEEEEEeeCCCCCCCCCcccchhhhhcchhhchh
Confidence 4677777654432 2334689999999999999999999999989999999999999999875322111100
Q ss_pred -----CHHHHHHHHHHHHHHh---CC-C-CceEEEEecccch-HHHHHHHHhCcCccceeEEEcCCCCCCCCCchhhhhh
Q 022534 89 -----TENEFHEELDKLLDVL---EV-K-YPFFLVVQGFLVG-SYGLTWALKNPSRISKLAILNSPLTASSPLPGLFQQL 157 (295)
Q Consensus 89 -----~~~~~~~~l~~~~~~l---~~-~-~~~~lv~~G~~~G-~~~~~~a~~~p~~v~~lil~~~p~~~~~~~~~~~~~~ 157 (295)
.......+....++.+ .. + ..+.+ .|+|.| ..++..+...++ +++.+.. .|.... .......
T Consensus 144 ~~~~~~~~~~~~d~~~~~~~l~~~~~v~~~~i~~--~G~s~Gg~~~~~~~~~~~~-~~~~~~~-~~~~~~---~~~~~~~ 216 (318)
T d1l7aa_ 144 DKDTYYYRGVYLDAVRALEVISSFDEVDETRIGV--TGGSQGGGLTIAAAALSDI-PKAAVAD-YPYLSN---FERAIDV 216 (318)
T ss_dssp CTTTCHHHHHHHHHHHHHHHHHHSTTEEEEEEEE--EEETHHHHHHHHHHHHCSC-CSEEEEE-SCCSCC---HHHHHHH
T ss_pred hhhhhhhHHHHHHHHHHHHHHHhcccccCcceEE--EeeccccHHHHHHhhcCcc-cceEEEe-cccccc---HHHHhhc
Confidence 1112233433333332 21 1 12333 366665 455666667765 5656544 333211 0000000
Q ss_pred hcccchhhhhhhHHHHHHHHHhCCCccccccccccccccccccCCchhHHHHHHHhcchhhhhHhhhcCcCCCCCCCcEE
Q 022534 158 RIPLLGEFTAQNAIMAERFIEAGSPYVLKLDKADVYRLPYLASSGPGFALLEAARKVNFKDISSRIGAGFSSGSWDKPVL 237 (295)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l 237 (295)
... .... . ...+....... . ............. ....+ +++++|+|
T Consensus 217 ~~~--~~~~---~--~~~~~~~~~~~-~-----------------~~~~~~~~~~~~~---~~~~~------~~i~~P~L 262 (318)
T d1l7aa_ 217 ALE--QPYL---E--INSFFRRNGSP-E-----------------TEVQAMKTLSYFD---IMNLA------DRVKVPVL 262 (318)
T ss_dssp CCS--TTTT---H--HHHHHHHSCCH-H-----------------HHHHHHHHHHTTC---HHHHG------GGCCSCEE
T ss_pred ccc--cccc---h--hhhhhhccccc-c-----------------ccccccccccccc---ccccc------ccCCCCEE
Confidence 000 0000 0 00000000000 0 0000000000001 11111 25689999
Q ss_pred EEEeCCCCCCCcchHHHHHhcCCCCeEEEEecCCCCCCCCCChHHHHHHHHHHH
Q 022534 238 VAWGISDKYLPQSVAEEFQKGNPNVVKLQMIEGAGHMPQEDWPEKVVDGLRYFF 291 (295)
Q Consensus 238 ~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl 291 (295)
+++|++|.+++++.+..+++.++..+++++++++||....|..+++.+.+.++|
T Consensus 263 ii~G~~D~~vp~~~~~~~~~~l~~~~~l~~~~~~gH~~~~~~~~~~~~fl~~~L 316 (318)
T d1l7aa_ 263 MSIGLIDKVTPPSTVFAAYNHLETKKELKVYRYFGHEYIPAFQTEKLAFFKQIL 316 (318)
T ss_dssp EEEETTCSSSCHHHHHHHHHHCCSSEEEEEETTCCSSCCHHHHHHHHHHHHHHH
T ss_pred EEEECCCCCcCHHHHHHHHHHcCCCcEEEEECCCCCCCcHHHHHHHHHHHHHhC
Confidence 999999999999999999888876689999999999776555555555555444
|
| >d1xkta_ c.69.1.22 (A:) Fatty acid synthase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterase domain of polypeptide, polyketide and fatty acid synthases domain: Fatty acid synthase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.85 E-value=3.5e-21 Score=160.51 Aligned_cols=106 Identities=8% Similarity=0.098 Sum_probs=72.1
Q ss_pred eCcEEEEEEEcCCCCCCCceEEEEcCCCCCCccchhhHHHhhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCCHHHHHHHH
Q 022534 18 SGEYRWFVRETGSADSRLGTIVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEEL 97 (295)
Q Consensus 18 ~~~~~~~~~~~g~~~~~~~~vv~lHG~~~~~~~w~~~~~~l~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~l 97 (295)
.+|-++.+...++ +.++||+|+||+++++..|..+++.| +++|+++|+||||.|+ ++++++++.
T Consensus 10 ~~~~~l~~l~~~~--~~~~Pl~l~Hg~~gs~~~~~~l~~~L---~~~v~~~d~~g~~~~~-----------~~~~~a~~~ 73 (286)
T d1xkta_ 10 PEGPTLMRLNSVQ--SSERPLFLVHPIEGSTTVFHSLASRL---SIPTYGLQCTRAAPLD-----------SIHSLAAYY 73 (286)
T ss_dssp TTSCSEEECCCCC--CCSCCEEEECCTTCCCGGGHHHHHTC---SSCEEEECCCTTSCCS-----------CHHHHHHHH
T ss_pred CCCCEEEEecCCC--CCCCeEEEECCCCccHHHHHHHHHHc---CCeEEEEeCCCCCCCC-----------CHHHHHHHH
Confidence 3443444433333 23468999999999999999999888 4899999999999876 345666666
Q ss_pred HHHHHHhCCCCceEEEEecccch-HHHHHHHHhCcCccceeEEEc
Q 022534 98 DKLLDVLEVKYPFFLVVQGFLVG-SYGLTWALKNPSRISKLAILN 141 (295)
Q Consensus 98 ~~~~~~l~~~~~~~lv~~G~~~G-~~~~~~a~~~p~~v~~lil~~ 141 (295)
.+.+.+..-.++++|+ |||+| .+|..+|.++|+++.++++++
T Consensus 74 ~~~~~~~~~~~~~~lv--GhS~Gg~vA~~~A~~~p~~~~~v~~l~ 116 (286)
T d1xkta_ 74 IDCIRQVQPEGPYRVA--GYSYGACVAFEMCSQLQAQQSPAPTHN 116 (286)
T ss_dssp HHHHHHHCCSSCCEEE--EETHHHHHHHHHHHHHHHC------CC
T ss_pred HHHHHHhcCCCceEEe--ecCCccHHHHHHHHHHHHcCCCceeEE
Confidence 5544444334467787 67765 578899999999998887654
|
| >d2h7xa1 c.69.1.22 (A:9-291) Picromycin polyketide synthase {Streptomyces venezuelae [TaxId: 54571]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterase domain of polypeptide, polyketide and fatty acid synthases domain: Picromycin polyketide synthase species: Streptomyces venezuelae [TaxId: 54571]
Probab=99.84 E-value=3.4e-20 Score=157.24 Aligned_cols=215 Identities=13% Similarity=0.113 Sum_probs=136.2
Q ss_pred CCceEEEEcCC--CCCCccchhhHHHhhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH-HHHHhCCCCce
Q 022534 34 RLGTIVFLHGA--PSHSYSYRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEELDK-LLDVLEVKYPF 110 (295)
Q Consensus 34 ~~~~vv~lHG~--~~~~~~w~~~~~~l~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~l~~-~~~~l~~~~~~ 110 (295)
.+|+++|+||+ +++...|..+++.|.. +++|+++|+||||.|+.+... ....+++++++++.+ +.+..+. .|+
T Consensus 59 ~~~~l~c~~~~~~~g~~~~y~~la~~L~~-~~~V~al~~pG~~~~~~~~~~--~~~~s~~~~a~~~~~~i~~~~~~-~P~ 134 (283)
T d2h7xa1 59 GRAVLVGCTGTAANGGPHEFLRLSTSFQE-ERDFLAVPLPGYGTGTGTGTA--LLPADLDTALDAQARAILRAAGD-APV 134 (283)
T ss_dssp CCCEEEEECCCCTTCSTTTTHHHHHTTTT-TCCEEEECCTTCCBC---CBC--CEESSHHHHHHHHHHHHHHHHTT-SCE
T ss_pred CCceEEEeCCCCCCCCHHHHHHHHHhcCC-CceEEEEeCCCCCCCCCCccc--cccCCHHHHHHHHHHHHHHhcCC-Cce
Confidence 36799999995 4677889999999986 799999999999999865432 123478888888766 4555554 478
Q ss_pred EEEEecccch-HHHHHHHHh----CcCccceeEEEcCCCCCCCCCchhhhhhhcccchhhhhhhHHHHHHHHHhCCCccc
Q 022534 111 FLVVQGFLVG-SYGLTWALK----NPSRISKLAILNSPLTASSPLPGLFQQLRIPLLGEFTAQNAIMAERFIEAGSPYVL 185 (295)
Q Consensus 111 ~lv~~G~~~G-~~~~~~a~~----~p~~v~~lil~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (295)
+|+ |||+| .++..+|.+ ++++|.+|++++++..... ...... .......+.... ....
T Consensus 135 vL~--GhS~GG~vA~e~A~~l~~~~g~~v~~LvL~d~~~~~~~---~~~~~~-----------~~~~~~~~~~~~-~~~~ 197 (283)
T d2h7xa1 135 VLL--GHSGGALLAHELAFRLERAHGAPPAGIVLVDPYPPGHQ---EPIEVW-----------SRQLGEGLFAGE-LEPM 197 (283)
T ss_dssp EEE--EETHHHHHHHHHHHHHHHHHSCCCSEEEEESCCCTTCC---HHHHHT-----------HHHHHHHHHHTC-SSCC
T ss_pred EEE--EeccchHHHHHHHHhhHHHcCCCceEEEEecCCccccc---cchhhh-----------hhhhHHHhhccc-cccc
Confidence 887 77776 467777764 3568999999976432210 000000 000001111100 0000
Q ss_pred cccccccccccccccCCchhHHHHHHHhcchhhhhHhhhcCcCCCCCCCcEEEEEeCCCCCCCcchHHHHHhcCCCCeEE
Q 022534 186 KLDKADVYRLPYLASSGPGFALLEAARKVNFKDISSRIGAGFSSGSWDKPVLVAWGISDKYLPQSVAEEFQKGNPNVVKL 265 (295)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~ 265 (295)
. ...+. ... . ..++...+....+++|+++|+|++|..++.+....+.+..+...++
T Consensus 198 --~---------------~~~l~-a~~-----~-~~~~~~~~~~~~~~~Pvl~i~g~~d~~~~~~~~~~w~~~~~~~~~~ 253 (283)
T d2h7xa1 198 --S---------------DARLL-AMG-----R-YARFLAGPRPGRSSAPVLLVRASEPLGDWQEERGDWRAHWDLPHTV 253 (283)
T ss_dssp --C---------------HHHHH-HHH-----H-HHHHHHSCCCCCCCSCEEEEEESSCSSCCCGGGCCCSCCCSSCSEE
T ss_pred --c---------------cHHHH-HHH-----H-HHHHHhhccccccCCCeEEEEeCCCCCCCHHHHHHHHHhCCCCcEE
Confidence 0 00000 000 0 0011122233478999999999999998887777777777765789
Q ss_pred EEecCCCCCCC-CCChHHHHHHHHHHHHhc
Q 022534 266 QMIEGAGHMPQ-EDWPEKVVDGLRYFFLNY 294 (295)
Q Consensus 266 ~~i~~~gH~~~-~e~p~~~~~~i~~fl~~~ 294 (295)
+.+++ +|+.+ .|+|+.+++.|++||+++
T Consensus 254 ~~v~G-~H~~ml~e~~~~vA~~i~~~L~~l 282 (283)
T d2h7xa1 254 ADVPG-DHFTMMRDHAPAVAEAVLSWLDAI 282 (283)
T ss_dssp EEESS-CTTHHHHTTHHHHHHHHHHHHHHH
T ss_pred EEEcC-CCcccccCCHHHHHHHHHHHHHhc
Confidence 99986 89865 467999999999999864
|
| >d1jmkc_ c.69.1.22 (C:) Surfactin synthetase, SrfA {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterase domain of polypeptide, polyketide and fatty acid synthases domain: Surfactin synthetase, SrfA species: Bacillus subtilis [TaxId: 1423]
Probab=99.84 E-value=3.5e-20 Score=151.24 Aligned_cols=208 Identities=14% Similarity=0.124 Sum_probs=119.4
Q ss_pred CceEEEEcCCCCCCccchhhHHHhhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCceEEEE
Q 022534 35 LGTIVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEELDKLLDVLEVKYPFFLVV 114 (295)
Q Consensus 35 ~~~vv~lHG~~~~~~~w~~~~~~l~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~~lv~ 114 (295)
+++|+|+||++++...|..+++.|+ +|+|+++|++|+|.+ .++|++ .++++...++++|+
T Consensus 17 ~~~l~~lhg~~g~~~~~~~la~~L~--~~~v~~~~~~g~~~~-------------a~~~~~----~i~~~~~~~~~~lv- 76 (230)
T d1jmkc_ 17 EQIIFAFPPVLGYGLMYQNLSSRLP--SYKLCAFDFIEEEDR-------------LDRYAD----LIQKLQPEGPLTLF- 76 (230)
T ss_dssp SEEEEEECCTTCCGGGGHHHHHHCT--TEEEEEECCCCSTTH-------------HHHHHH----HHHHHCCSSCEEEE-
T ss_pred CCeEEEEcCCCCCHHHHHHHHHHCC--CCEEeccCcCCHHHH-------------HHHHHH----HHHHhCCCCcEEEE-
Confidence 4699999999999999999999995 699999999998632 234444 44444445678787
Q ss_pred ecccch-HHHHHHHHhCcCccceeE---EEcCCCCCCCCCchhhhhhhcccchhhhhhhHHHHHHHHHhCCCcccccccc
Q 022534 115 QGFLVG-SYGLTWALKNPSRISKLA---ILNSPLTASSPLPGLFQQLRIPLLGEFTAQNAIMAERFIEAGSPYVLKLDKA 190 (295)
Q Consensus 115 ~G~~~G-~~~~~~a~~~p~~v~~li---l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (295)
|||+| .+|..+|.++|+++..++ .+.++..... ... ..... . ....... +... ....... .
T Consensus 77 -GhS~GG~vA~~~A~~~~~~~~~v~~l~~~~~~~~~~~--~~~-~~~~~---~---~~~~~~~-~~~~--~~~~~~~--~ 141 (230)
T d1jmkc_ 77 -GYSAGCSLAFEAAKKLEGQGRIVQRIIMVDSYKKQGV--SDL-DGRTV---E---SDVEALM-NVNR--DNEALNS--E 141 (230)
T ss_dssp -EETHHHHHHHHHHHHHHHTTCCEEEEEEESCCEECCC--C---------------CCHHHHH-HHTT--TCSGGGS--H
T ss_pred -eeccChHHHHHHHHhhhhhCccceeeecccccCccch--hhh-hhhhh---h---hhhhhhh-hccc--ccccccc--H
Confidence 77776 568888887766554444 3332211100 000 00000 0 0000000 0000 0000000 0
Q ss_pred ccccccccccCCchhHHHHHHHhcchhhhhHhhhcCcCCCCCCCcEEEEEeCCCCCCCcchHHHHHhcCCCCeEEEEecC
Q 022534 191 DVYRLPYLASSGPGFALLEAARKVNFKDISSRIGAGFSSGSWDKPVLVAWGISDKYLPQSVAEEFQKGNPNVVKLQMIEG 270 (295)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~ 270 (295)
... ..+.... ...............+++|+++|+|++|..++.... ...+..+...++++++
T Consensus 142 ~~~-----------~~~~~~~-----~~~~~~~~~~~~~~~i~~p~l~i~g~~D~~~~~~~~-~w~~~~~~~~~~~~i~- 203 (230)
T d1jmkc_ 142 AVK-----------HGLKQKT-----HAFYSYYVNLISTGQVKADIDLLTSGADFDIPEWLA-SWEEATTGAYRMKRGF- 203 (230)
T ss_dssp HHH-----------HHHHHHH-----HHHHHHHHHCCCCSCBSSEEEEEECSSCCCCCTTEE-CSGGGBSSCEEEEECS-
T ss_pred HHH-----------HHHHHHH-----HHHHHhhhcccccccccCcceeeeecCCcccchhHH-HHHHhccCCcEEEEEc-
Confidence 000 0000000 011111111112347899999999999998876543 3444554457899998
Q ss_pred CCCCCCCCCh--HHHHHHHHHHHHhcC
Q 022534 271 AGHMPQEDWP--EKVVDGLRYFFLNYT 295 (295)
Q Consensus 271 ~gH~~~~e~p--~~~~~~i~~fl~~~~ 295 (295)
+||+.|+++| +++++.|++||.+.|
T Consensus 204 g~H~~ml~~~~~~~va~~I~~~L~~~~ 230 (230)
T d1jmkc_ 204 GTHAEMLQGETLDRNAGILLEFLNTQT 230 (230)
T ss_dssp SCGGGTTSHHHHHHHHHHHHHHHTCBC
T ss_pred CCChhhcCCccHHHHHHHHHHHHhhcC
Confidence 5999999876 899999999998765
|
| >d1uxoa_ c.69.1.31 (A:) Hypothetical protein YdeN {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: YdeN-like domain: Hypothetical protein YdeN species: Bacillus subtilis [TaxId: 1423]
Probab=99.83 E-value=1.1e-19 Score=143.94 Aligned_cols=177 Identities=17% Similarity=0.164 Sum_probs=116.5
Q ss_pred eEEEEcCCCCCCcc--chhhHHHhhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCceEEEE
Q 022534 37 TIVFLHGAPSHSYS--YRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEELDKLLDVLEVKYPFFLVV 114 (295)
Q Consensus 37 ~vv~lHG~~~~~~~--w~~~~~~l~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~~lv~ 114 (295)
.||++||++++... |..+++.|+++||+|+++|+||||.+. ++++.+.+....+.. ..+++++
T Consensus 3 ~V~~vHG~~~~~~~~~~~~l~~~L~~~G~~v~~~d~p~~~~~~------------~~~~~~~l~~~~~~~--~~~~~lv- 67 (186)
T d1uxoa_ 3 QVYIIHGYRASSTNHWFPWLKKRLLADGVQADILNMPNPLQPR------------LEDWLDTLSLYQHTL--HENTYLV- 67 (186)
T ss_dssp EEEEECCTTCCTTSTTHHHHHHHHHHTTCEEEEECCSCTTSCC------------HHHHHHHHHTTGGGC--CTTEEEE-
T ss_pred EEEEECCCCCCcchhHHHHHHHHHHhCCCEEEEeccCCCCcch------------HHHHHHHHHHHHhcc--CCCcEEE-
Confidence 79999999987654 567888899899999999999999653 345666666665543 3456676
Q ss_pred ecccchH-HHHHHHHhCcCccceeEEEc-CCCCCCCCCchhhhhhhcccchhhhhhhHHHHHHHHHhCCCcccccccccc
Q 022534 115 QGFLVGS-YGLTWALKNPSRISKLAILN-SPLTASSPLPGLFQQLRIPLLGEFTAQNAIMAERFIEAGSPYVLKLDKADV 192 (295)
Q Consensus 115 ~G~~~G~-~~~~~a~~~p~~v~~lil~~-~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (295)
|||+|+ +++.++.++|+.....++.. ++..... +. ... . ..+
T Consensus 68 -GhS~Gg~~a~~~a~~~~~~~~~~~l~~~~~~~~~~--~~-~~~--------~--------~~~---------------- 111 (186)
T d1uxoa_ 68 -AHSLGCPAILRFLEHLQLRAALGGIILVSGFAKSL--PT-LQM--------L--------DEF---------------- 111 (186)
T ss_dssp -EETTHHHHHHHHHHTCCCSSCEEEEEEETCCSSCC--TT-CGG--------G--------GGG----------------
T ss_pred -EechhhHHHHHHHHhCCccceeeEEeecccccccc--hh-hhh--------h--------hhh----------------
Confidence 677765 67778888887554333332 2221110 00 000 0 000
Q ss_pred ccccccccCCchhHHHHHHHhcchhhhhHhhhcCcCCCCCCCcEEEEEeCCCCCCCcchHHHHHhcCCCCeEEEEecCCC
Q 022534 193 YRLPYLASSGPGFALLEAARKVNFKDISSRIGAGFSSGSWDKPVLVAWGISDKYLPQSVAEEFQKGNPNVVKLQMIEGAG 272 (295)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~g 272 (295)
...... .. ... ....|+++|+|++|+++|++.+..+++..+ +++++++++|
T Consensus 112 -----~~~~~~----~~---------~~~---------~~~~p~lvi~g~~D~~vp~~~~~~l~~~~~--~~~~~~~~~g 162 (186)
T d1uxoa_ 112 -----TQGSFD----HQ---------KII---------ESAKHRAVIASKDDQIVPFSFSKDLAQQID--AALYEVQHGG 162 (186)
T ss_dssp -----TCSCCC----HH---------HHH---------HHEEEEEEEEETTCSSSCHHHHHHHHHHTT--CEEEEETTCT
T ss_pred -----hccccc----cc---------ccc---------cCCCCEEEEecCCCCCCCHHHHHHHHHHcC--CEEEEeCCCC
Confidence 000000 00 000 125899999999999999999999998874 6999999999
Q ss_pred CCCCCC---ChHHHHHHHHHHHHh
Q 022534 273 HMPQED---WPEKVVDGLRYFFLN 293 (295)
Q Consensus 273 H~~~~e---~p~~~~~~i~~fl~~ 293 (295)
|+...+ .-.++.+.|++|+.+
T Consensus 163 H~~~~~~~~~~~~~~~~l~~~~~~ 186 (186)
T d1uxoa_ 163 HFLEDEGFTSLPIVYDVLTSYFSK 186 (186)
T ss_dssp TSCGGGTCSCCHHHHHHHHHHHHC
T ss_pred CcCccccCcccHHHHHHHHHHHcC
Confidence 987654 234688999999863
|
| >d2dsta1 c.69.1.39 (A:2-123) Hypothetical protein TTHA1544 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: TTHA1544-like domain: Hypothetical protein TTHA1544 species: Thermus thermophilus [TaxId: 274]
Probab=99.83 E-value=1.3e-20 Score=138.44 Aligned_cols=98 Identities=12% Similarity=0.272 Sum_probs=78.9
Q ss_pred eeEEeCcEEEEEEEcCCCCCCCceEEEEcCCCCCCccchhhHHHhhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCCHHHH
Q 022534 14 SYIKSGEYRWFVRETGSADSRLGTIVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEF 93 (295)
Q Consensus 14 ~~~~~~~~~~~~~~~g~~~~~~~~vv~lHG~~~~~~~w~~~~~~l~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~ 93 (295)
-|++++|.++||.+.|++ |||||+||. +..| .+.|++ +|+||++|+||||+|+++ .++.+++
T Consensus 4 ~~~~~~G~~l~y~~~G~G----~pvlllHG~---~~~w---~~~L~~-~yrvi~~DlpG~G~S~~p-------~~s~~~~ 65 (122)
T d2dsta1 4 GYLHLYGLNLVFDRVGKG----PPVLLVAEE---ASRW---PEALPE-GYAFYLLDLPGYGRTEGP-------RMAPEEL 65 (122)
T ss_dssp EEEEETTEEEEEEEECCS----SEEEEESSS---GGGC---CSCCCT-TSEEEEECCTTSTTCCCC-------CCCHHHH
T ss_pred eEEEECCEEEEEEEEcCC----CcEEEEecc---cccc---cccccC-CeEEEEEeccccCCCCCc-------ccccchh
Confidence 589999999999999965 589999984 3344 345664 899999999999999864 2477899
Q ss_pred HHHHHHHHHHhCCCCceEEEEecccch-HHHHHHHHhCcC
Q 022534 94 HEELDKLLDVLEVKYPFFLVVQGFLVG-SYGLTWALKNPS 132 (295)
Q Consensus 94 ~~~l~~~~~~l~~~~~~~lv~~G~~~G-~~~~~~a~~~p~ 132 (295)
++++.++++++++++++++ |||+| .+|..+++..+.
T Consensus 66 a~~i~~ll~~L~i~~~~vi---G~S~Gg~ia~~laa~~~~ 102 (122)
T d2dsta1 66 AHFVAGFAVMMNLGAPWVL---LRGLGLALGPHLEALGLR 102 (122)
T ss_dssp HHHHHHHHHHTTCCSCEEE---ECGGGGGGHHHHHHTTCC
T ss_pred HHHHHHHHHHhCCCCcEEE---EeCccHHHHHHHHhhccc
Confidence 9999999999999986544 77765 578888776543
|
| >d2jbwa1 c.69.1.41 (A:8-367) 2,6-dihydropseudooxynicotine hydrolase {Arthrobacter nicotinovorans [TaxId: 29320]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: 2,6-dihydropseudooxynicotine hydrolase-like domain: 2,6-dihydropseudooxynicotine hydrolase species: Arthrobacter nicotinovorans [TaxId: 29320]
Probab=99.83 E-value=9.3e-19 Score=153.27 Aligned_cols=226 Identities=15% Similarity=0.134 Sum_probs=141.1
Q ss_pred eEEeCcEEEEEEEcCC-CCCCCceEEEEcCCCCCCccchhhHHHhhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCCHHHH
Q 022534 15 YIKSGEYRWFVRETGS-ADSRLGTIVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEF 93 (295)
Q Consensus 15 ~~~~~~~~~~~~~~g~-~~~~~~~vv~lHG~~~~~~~w~~~~~~l~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~ 93 (295)
.+.++|..+...-..+ ++.+.|+||++||+.++...|..+.+.|+++||.|+++|+||||.|....... ...+..
T Consensus 110 ~ip~dg~~l~g~l~~P~~~~~~P~Vi~~hG~~~~~e~~~~~~~~l~~~G~~vl~~D~~G~G~s~~~~~~~----~~~~~~ 185 (360)
T d2jbwa1 110 ELVVDGIPMPVYVRIPEGPGPHPAVIMLGGLESTKEESFQMENLVLDRGMATATFDGPGQGEMFEYKRIA----GDYEKY 185 (360)
T ss_dssp EEEETTEEEEEEEECCSSSCCEEEEEEECCSSCCTTTTHHHHHHHHHTTCEEEEECCTTSGGGTTTCCSC----SCHHHH
T ss_pred ecCcCCcccceEEEecCCCCCceEEEEeCCCCccHHHHHHHHHHHHhcCCEEEEEccccccccCcccccc----ccHHHH
Confidence 3455888877765543 23346899999999988888888899999899999999999999998643221 123455
Q ss_pred HHHHHHHHHHhCC-C-CceEEEEecccch-HHHHHHHHhCcCccceeEEEcCCCCCCCCCchhhhhhhcccchhhhhhhH
Q 022534 94 HEELDKLLDVLEV-K-YPFFLVVQGFLVG-SYGLTWALKNPSRISKLAILNSPLTASSPLPGLFQQLRIPLLGEFTAQNA 170 (295)
Q Consensus 94 ~~~l~~~~~~l~~-~-~~~~lv~~G~~~G-~~~~~~a~~~p~~v~~lil~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (295)
...+.+++..... + +.+.++ |+|+| .+++.+|..+| +|+++|.+++..... . +. ...+
T Consensus 186 ~~~v~d~l~~~~~vd~~rI~l~--G~S~GG~~Al~~A~~~p-ri~a~V~~~~~~~~~-~----~~-~~~~---------- 246 (360)
T d2jbwa1 186 TSAVVDLLTKLEAIRNDAIGVL--GRSLGGNYALKSAACEP-RLAACISWGGFSDLD-Y----WD-LETP---------- 246 (360)
T ss_dssp HHHHHHHHHHCTTEEEEEEEEE--EETHHHHHHHHHHHHCT-TCCEEEEESCCSCST-T----GG-GSCH----------
T ss_pred HHHHHHHHHhcccccccceeeh--hhhcccHHHHHHhhcCC-CcceEEEEcccccHH-H----Hh-hhhh----------
Confidence 6666677665432 2 235555 77766 46777777887 689888775433211 0 00 0000
Q ss_pred HHHHHHHHh-CCCccccccccccccccccccCCchhHHHHHHHhcchhhhhHhhhcCcCCCCCCCcEEEEEeCCCCCCCc
Q 022534 171 IMAERFIEA-GSPYVLKLDKADVYRLPYLASSGPGFALLEAARKVNFKDISSRIGAGFSSGSWDKPVLVAWGISDKYLPQ 249 (295)
Q Consensus 171 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~~~ 249 (295)
.....+... .... . . ..........+.... ..+++||+|+|+|++|+ +|+
T Consensus 247 ~~~~~~~~~~~~~~-~----~--------------~~~~~~~~~~~~~~~---------~~~i~~P~Lii~G~~D~-vp~ 297 (360)
T d2jbwa1 247 LTKESWKYVSKVDT-L----E--------------EARLHVHAALETRDV---------LSQIACPTYILHGVHDE-VPL 297 (360)
T ss_dssp HHHHHHHHHTTCSS-H----H--------------HHHHHHHHHTCCTTT---------GGGCCSCEEEEEETTSS-SCT
T ss_pred hhhHHHHHhccCCc-h----H--------------HHHHHHHhhcchhhh---------HhhCCCCEEEEEeCCCC-cCH
Confidence 000111000 0000 0 0 000000111111111 12678999999999998 488
Q ss_pred chHHHHHhcCCC-CeEEEEecCCCCCCCCCChHHHHHHHHHHHHh
Q 022534 250 SVAEEFQKGNPN-VVKLQMIEGAGHMPQEDWPEKVVDGLRYFFLN 293 (295)
Q Consensus 250 ~~~~~~~~~~~~-~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 293 (295)
+.+..+.+.++. ..+++++++++|.. .+.+.+....|.+||..
T Consensus 298 ~~~~~l~~~~~~~~~~l~~~~~g~H~~-~~~~~~~~~~i~dWl~~ 341 (360)
T d2jbwa1 298 SFVDTVLELVPAEHLNLVVEKDGDHCC-HNLGIRPRLEMADWLYD 341 (360)
T ss_dssp HHHHHHHHHSCGGGEEEEEETTCCGGG-GGGTTHHHHHHHHHHHH
T ss_pred HHHHHHHHhcCCCCeEEEEECCCCcCC-CcChHHHHHHHHHHHHH
Confidence 889999888764 45788899999964 46677788888889865
|
| >d2fuka1 c.69.1.36 (A:3-220) XC6422 protein {Xanthomonas campestris [TaxId: 339]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Atu1826-like domain: XC6422 protein species: Xanthomonas campestris [TaxId: 339]
Probab=99.82 E-value=1.1e-18 Score=141.62 Aligned_cols=170 Identities=14% Similarity=0.120 Sum_probs=115.8
Q ss_pred CceEEEEcCCCC-----CCccchhhHHHhhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh---CC
Q 022534 35 LGTIVFLHGAPS-----HSYSYRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEELDKLLDVL---EV 106 (295)
Q Consensus 35 ~~~vv~lHG~~~-----~~~~w~~~~~~l~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~l~~~~~~l---~~ 106 (295)
.+++|++|+++. ++..+..+++.|+++||.|+.+|+||+|+|+...... ....+|+..+++.+ .-
T Consensus 35 ~~~~vl~Hph~~~GG~~~~~~~~~la~~l~~~G~~vlrfd~RG~G~S~g~~~~~-------~~~~~D~~a~~~~~~~~~~ 107 (218)
T d2fuka1 35 PVTAIVCHPLSTEGGSMHNKVVTMAARALRELGITVVRFNFRSVGTSAGSFDHG-------DGEQDDLRAVAEWVRAQRP 107 (218)
T ss_dssp SEEEEEECSCTTTTCSTTCHHHHHHHHHHHTTTCEEEEECCTTSTTCCSCCCTT-------THHHHHHHHHHHHHHHHCT
T ss_pred CcEEEEECCCCCCCcCCCChHHHHHHHHHHHcCCeEEEeecCCCccCCCccCcC-------cchHHHHHHHHHHHhhccc
Confidence 346788895532 2223557788899899999999999999999753221 23344544444433 12
Q ss_pred CCceEEEEecccchH-HHHHHHHhCcCccceeEEEcCCCCCCCCCchhhhhhhcccchhhhhhhHHHHHHHHHhCCCccc
Q 022534 107 KYPFFLVVQGFLVGS-YGLTWALKNPSRISKLAILNSPLTASSPLPGLFQQLRIPLLGEFTAQNAIMAERFIEAGSPYVL 185 (295)
Q Consensus 107 ~~~~~lv~~G~~~G~-~~~~~a~~~p~~v~~lil~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (295)
.++++++ |+|+|+ +++.+|.+. ++++++++++|... +
T Consensus 108 ~~~v~l~--G~S~Gg~va~~~a~~~--~~~~lil~ap~~~~------------------~-------------------- 145 (218)
T d2fuka1 108 TDTLWLA--GFSFGAYVSLRAAAAL--EPQVLISIAPPAGR------------------W-------------------- 145 (218)
T ss_dssp TSEEEEE--EETHHHHHHHHHHHHH--CCSEEEEESCCBTT------------------B--------------------
T ss_pred CceEEEE--EEcccchhhhhhhccc--ccceEEEeCCcccc------------------h--------------------
Confidence 3346665 777775 555555543 46788887532100 0
Q ss_pred cccccccccccccccCCchhHHHHHHHhcchhhhhHhhhcCcCCCCCCCcEEEEEeCCCCCCCcchHHHHHhcCCCCeEE
Q 022534 186 KLDKADVYRLPYLASSGPGFALLEAARKVNFKDISSRIGAGFSSGSWDKPVLVAWGISDKYLPQSVAEEFQKGNPNVVKL 265 (295)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~ 265 (295)
.+ .. ....+|+|+|+|++|.++|++...++.+..+..+++
T Consensus 146 ----------~~-------------------~~-----------~~~~~P~Lvi~G~~D~~vp~~~~~~l~~~~~~~~~l 185 (218)
T d2fuka1 146 ----------DF-------------------SD-----------VQPPAQWLVIQGDADEIVDPQAVYDWLETLEQQPTL 185 (218)
T ss_dssp ----------CC-------------------TT-----------CCCCSSEEEEEETTCSSSCHHHHHHHHTTCSSCCEE
T ss_pred ----------hh-------------------hc-----------cccccceeeEecCCCcCcCHHHHHHHHHHccCCceE
Confidence 00 00 023689999999999999999999998877766799
Q ss_pred EEecCCCCCCCCCChHHHHHHHHHHHHhc
Q 022534 266 QMIEGAGHMPQEDWPEKVVDGLRYFFLNY 294 (295)
Q Consensus 266 ~~i~~~gH~~~~e~p~~~~~~i~~fl~~~ 294 (295)
++|||++|+.. .+-+++.+.+.+|+.++
T Consensus 186 ~~i~ga~H~f~-~~~~~l~~~~~~~v~~~ 213 (218)
T d2fuka1 186 VRMPDTSHFFH-RKLIDLRGALQHGVRRW 213 (218)
T ss_dssp EEETTCCTTCT-TCHHHHHHHHHHHHGGG
T ss_pred EEeCCCCCCCC-CCHHHHHHHHHHHHHHh
Confidence 99999999765 45567999999999764
|
| >d1ufoa_ c.69.1.27 (A:) Hypothetical protein TT1662 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Hypothetical protein TT1662 domain: Hypothetical protein TT1662 species: Thermus thermophilus [TaxId: 274]
Probab=99.82 E-value=3.5e-19 Score=146.29 Aligned_cols=214 Identities=14% Similarity=0.071 Sum_probs=123.8
Q ss_pred eEEeCcEEEEEEEcCCCCCCCceEEEEcCCCCCCccchhhHHHhhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCCHHHHH
Q 022534 15 YIKSGEYRWFVRETGSADSRLGTIVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFH 94 (295)
Q Consensus 15 ~~~~~~~~~~~~~~g~~~~~~~~vv~lHG~~~~~~~w~~~~~~l~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~ 94 (295)
.++..|.-+.+....+ ++|+||++||++++...|..+++.|+++||.|++||+||||.|..+.... ..........
T Consensus 7 ~~~l~g~~~~~~~p~~---~~~~vl~lHG~~~~~~~~~~~~~~la~~G~~V~~~D~~g~g~s~~~~~~~-~~~~~~~~~~ 82 (238)
T d1ufoa_ 7 RLTLAGLSVLARIPEA---PKALLLALHGLQGSKEHILALLPGYAERGFLLLAFDAPRHGEREGPPPSS-KSPRYVEEVY 82 (238)
T ss_dssp EEEETTEEEEEEEESS---CCEEEEEECCTTCCHHHHHHTSTTTGGGTEEEEECCCTTSTTSSCCCCCT-TSTTHHHHHH
T ss_pred EEEECCEEEEecCCCC---CCeEEEEeCCCCCCHHHHHHHHHHHHHCCCEEEEecCCCCCCCccccccc-ccchhhhhhh
Confidence 3567887777765433 36899999999999999999999999889999999999999998754332 1111122222
Q ss_pred HHHHHHHHH----------hCCCCceEEEEecccchH-HHHHHHHhCcCccceeEEEcCCCCCCCCCchhhhhhhcccch
Q 022534 95 EELDKLLDV----------LEVKYPFFLVVQGFLVGS-YGLTWALKNPSRISKLAILNSPLTASSPLPGLFQQLRIPLLG 163 (295)
Q Consensus 95 ~~l~~~~~~----------l~~~~~~~lv~~G~~~G~-~~~~~a~~~p~~v~~lil~~~p~~~~~~~~~~~~~~~~~~~~ 163 (295)
.++.+.++. .+.+ ++.++ |+|+|+ +++.++..+|+. +..+.+..+..... .+ ......
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~-~v~~~--G~S~Gg~~a~~~~~~~p~~-~~~~~~~~~~~~~~-~~----~~~~~~-- 151 (238)
T d1ufoa_ 83 RVALGFKEEARRVAEEAERRFGL-PLFLA--GGSLGAFVAHLLLAEGFRP-RGVLAFIGSGFPMK-LP----QGQVVE-- 151 (238)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHCC-CEEEE--EETHHHHHHHHHHHTTCCC-SCEEEESCCSSCCC-CC----TTCCCC--
T ss_pred hhHHhHHHHHHHHhhhccccCCc-eEEEE--EecccHHHHHHHHhcCcch-hheeeeeeeccccc-cc----cccccc--
Confidence 222222221 1222 45555 777765 456667788864 44554433221110 00 000000
Q ss_pred hhhhhhHHHHHHHHHhCCCccccccccccccccccccCCchhHHHHHHHhcchhhhhHhhhcCcCCCCCCCcEEEEEeCC
Q 022534 164 EFTAQNAIMAERFIEAGSPYVLKLDKADVYRLPYLASSGPGFALLEAARKVNFKDISSRIGAGFSSGSWDKPVLVAWGIS 243 (295)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~ 243 (295)
..... .. ...+...... +..++|+|+++|++
T Consensus 152 -----~~~~~-~~-----------------------------------~~~~~~~~~~--------~~~~~P~li~~G~~ 182 (238)
T d1ufoa_ 152 -----DPGVL-AL-----------------------------------YQAPPATRGE--------AYGGVPLLHLHGSR 182 (238)
T ss_dssp -----CHHHH-HH-----------------------------------HHSCGGGCGG--------GGTTCCEEEEEETT
T ss_pred -----ccccc-ch-----------------------------------hhhhhhhhhh--------hhcCCCeEEEEcCC
Confidence 00000 00 0000000000 12368999999999
Q ss_pred CCCCCcchHHHHHhcC-----CCCeEEEEecCCCCCCCCCChHHHHHHHHHHHH
Q 022534 244 DKYLPQSVAEEFQKGN-----PNVVKLQMIEGAGHMPQEDWPEKVVDGLRYFFL 292 (295)
Q Consensus 244 D~~~~~~~~~~~~~~~-----~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~ 292 (295)
|.+++++.+.++.+.+ +..+++.+++|+||...-|.-+...+.+.+||+
T Consensus 183 D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~g~gH~~~~~~~~~~~~f~~~~l~ 236 (238)
T d1ufoa_ 183 DHIVPLARMEKTLEALRPHYPEGRLARFVEEGAGHTLTPLMARVGLAFLEHWLE 236 (238)
T ss_dssp CTTTTHHHHHHHHHHHGGGCTTCCEEEEEETTCCSSCCHHHHHHHHHHHHHHHH
T ss_pred CCccCHHHHHHHHHHHHhcCCCceEEEEEECCCCCccCHHHHHHHHHHHHHHhc
Confidence 9999999887777543 224688999999998653333334444444443
|
| >d1ispa_ c.69.1.18 (A:) Lipase A {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Bacterial lipase domain: Lipase A species: Bacillus subtilis [TaxId: 1423]
Probab=99.81 E-value=2.2e-19 Score=141.87 Aligned_cols=169 Identities=14% Similarity=0.135 Sum_probs=127.9
Q ss_pred ceEEEEcCCCCCCccchhhHHHhhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCceEEEEe
Q 022534 36 GTIVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEELDKLLDVLEVKYPFFLVVQ 115 (295)
Q Consensus 36 ~~vv~lHG~~~~~~~w~~~~~~l~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~~lv~~ 115 (295)
+||||+||++++...|..+++.|+++||+|+.+|.+|+|.|.... .+..+.+++++.+++++++.++ +.+|
T Consensus 3 ~PVv~vHG~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~~~~~------~~~~~~l~~~i~~~~~~~~~~~-v~lv-- 73 (179)
T d1ispa_ 3 NPVVMVHGIGGASFNFAGIKSYLVSQGWSRDKLYAVDFWDKTGTN------YNNGPVLSRFVQKVLDETGAKK-VDIV-- 73 (179)
T ss_dssp CCEEEECCTTCCGGGGHHHHHHHHHTTCCGGGEEECCCSCTTCCH------HHHHHHHHHHHHHHHHHHCCSC-EEEE--
T ss_pred CCEEEECCCCCCHHHHHHHHHHHHHcCCeEEEEecCCcccccccc------chhhhhHHHHHHHHHHhcCCce-EEEE--
Confidence 589999999999999999999999889999999999999987532 2245678889999999988775 6676
Q ss_pred cccchH-HHHHHHHhC--cCccceeEEEcCCCCCCCCCchhhhhhhcccchhhhhhhHHHHHHHHHhCCCcccccccccc
Q 022534 116 GFLVGS-YGLTWALKN--PSRISKLAILNSPLTASSPLPGLFQQLRIPLLGEFTAQNAIMAERFIEAGSPYVLKLDKADV 192 (295)
Q Consensus 116 G~~~G~-~~~~~a~~~--p~~v~~lil~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (295)
|||+|+ ++..++.++ |++|+++|++++|..... . .
T Consensus 74 GHSmGG~va~~~~~~~~~~~~V~~~V~l~~p~~g~~-------------------------------~-~---------- 111 (179)
T d1ispa_ 74 AHSMGGANTLYYIKNLDGGNKVANVVTLGGANRLTT-------------------------------G-K---------- 111 (179)
T ss_dssp EETHHHHHHHHHHHHSSGGGTEEEEEEESCCGGGTC-------------------------------S-B----------
T ss_pred eecCcCHHHHHHHHHcCCchhhCEEEEECCCCCCch-------------------------------h-h----------
Confidence 778775 556666655 789999999976431100 0 0
Q ss_pred ccccccccCCchhHHHHHHHhcchhhhhHhhhcCcCCCCCCCcEEEEEeCCCCCCCcchHHHHHhcCCCCeEEEEecCCC
Q 022534 193 YRLPYLASSGPGFALLEAARKVNFKDISSRIGAGFSSGSWDKPVLVAWGISDKYLPQSVAEEFQKGNPNVVKLQMIEGAG 272 (295)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~g 272 (295)
.++. . .....+|++.|+|+.|.++++..+ .++. ++.+.+++++
T Consensus 112 -~l~~-------------------~-----------~~~~~~~~~~i~~~~D~~v~~~~~-----~l~~-~~~~~~~~~~ 154 (179)
T d1ispa_ 112 -ALPG-------------------T-----------DPNQKILYTSIYSSADMIVMNYLS-----RLDG-ARNVQIHGVG 154 (179)
T ss_dssp -CCCC-------------------S-----------CTTCCCEEEEEEETTCSSSCHHHH-----CCBT-SEEEEESSCC
T ss_pred -hcCC-------------------c-----------ccccCceEEEEEecCCcccCchhh-----cCCC-ceEEEECCCC
Confidence 0000 0 002368999999999999987532 4565 6889999999
Q ss_pred CCCCCCChHHHHHHHHHHHHh
Q 022534 273 HMPQEDWPEKVVDGLRYFFLN 293 (295)
Q Consensus 273 H~~~~e~p~~~~~~i~~fl~~ 293 (295)
|..++.+| ++.+.|++||.+
T Consensus 155 H~~l~~~~-~v~~~i~~~L~~ 174 (179)
T d1ispa_ 155 HIGLLYSS-QVNSLIKEGLNG 174 (179)
T ss_dssp TGGGGGCH-HHHHHHHHHHTT
T ss_pred chhhccCH-HHHHHHHHHHhc
Confidence 99888888 578899999865
|
| >d1qlwa_ c.69.1.15 (A:) A novel bacterial esterase {Alcaligenes sp. [TaxId: 512]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: A novel bacterial esterase domain: A novel bacterial esterase species: Alcaligenes sp. [TaxId: 512]
Probab=99.80 E-value=7.6e-22 Score=168.56 Aligned_cols=65 Identities=14% Similarity=0.132 Sum_probs=50.3
Q ss_pred eeeEEeCcEEEEEEEcCCCCCCCceEEEEcCCCCCCccchh-------hHHHhhhCCCeEEEeCCCCCCCCCCC
Q 022534 13 GSYIKSGEYRWFVRETGSADSRLGTIVFLHGAPSHSYSYRN-------VMSQMSDAGFHCFAPDWLGFGFSDKP 79 (295)
Q Consensus 13 ~~~~~~~~~~~~~~~~g~~~~~~~~vv~lHG~~~~~~~w~~-------~~~~l~~~~~~via~Dl~G~G~S~~~ 79 (295)
+.++..+...++|....++ .++||||+||++.++.+|.. +++.+.++||+|+++|+||||+|+.+
T Consensus 38 ~~~~~~~~~~v~~~~p~~~--~~~PvvllHG~~~~~~~w~~~~~~~~~~~~~~~~~Gy~V~~~D~~G~G~S~~~ 109 (318)
T d1qlwa_ 38 HGTVTVDQMYVRYQIPQRA--KRYPITLIHGCCLTGMTWETTPDGRMGWDEYFLRKGYSTYVIDQSGRGRSATD 109 (318)
T ss_dssp SEEEEESCEEEEEEEETTC--CSSCEEEECCTTCCGGGGSSCTTSCCCHHHHHHHTTCCEEEEECTTSTTSCCC
T ss_pred CCceeeceEEEEEECCCCC--CCCcEEEECCCCCCcCccccCcccchhHHHHHHhCCCEEEEecCCCCCCCCCc
Confidence 3455556666666554433 35689999999999999975 46777778999999999999999864
|
| >d2vata1 c.69.1.40 (A:7-382) Acetyl-CoA:deacetylcephalosporin C acetyltransferase CefG {Acremonium chrysogenum [TaxId: 5044]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: O-acetyltransferase domain: Acetyl-CoA:deacetylcephalosporin C acetyltransferase CefG species: Acremonium chrysogenum [TaxId: 5044]
Probab=99.78 E-value=1.4e-17 Score=145.20 Aligned_cols=270 Identities=20% Similarity=0.214 Sum_probs=152.5
Q ss_pred cEEEEEEEcCCCC-CCCceEEEEcCCCCCCc---cchhhH---HHhhhCCCeEEEeCCCCCCCCCCCCCCC---------
Q 022534 20 EYRWFVRETGSAD-SRLGTIVFLHGAPSHSY---SYRNVM---SQMSDAGFHCFAPDWLGFGFSDKPEKGY--------- 83 (295)
Q Consensus 20 ~~~~~~~~~g~~~-~~~~~vv~lHG~~~~~~---~w~~~~---~~l~~~~~~via~Dl~G~G~S~~~~~~~--------- 83 (295)
+.++.|+.+|.-+ ...++||+.|++.+++. .|..++ ..|....|-||++|.+|-|.++.+....
T Consensus 28 ~~~laY~t~G~ln~~~~NaVlv~h~ltg~~~~~~WW~~liG~g~alDt~kyfVI~~n~lG~~~gst~p~s~~p~~~~~~~ 107 (376)
T d2vata1 28 DVPVAYKSWGRMNVSRDNCVIVCHTLTSSAHVTSWWPTLFGQGRAFDTSRYFIICLNYLGSPFGSAGPCSPDPDAEGQRP 107 (376)
T ss_dssp EEEEEEEEESCCCTTSCCEEEEECCTTCCSCGGGTCGGGBSTTSSBCTTTCEEEEECCTTCSSSSSSTTSBCTTTC--CB
T ss_pred CceEEEEeecccCCCCCCEEEEcCCCcCCccccccHHHhCCCCCccCccceEEEEeccCCCCcCCCCCCCCCcccccCCc
Confidence 4889999999633 22357999999977653 466665 2354457999999999998765321110
Q ss_pred ---CCCCCCHHHHHHHHHHHHHHhCCCCceEEEEecccch-HHHHHHHHhCcCccceeEEEcCCCCCCCCCchhhhhhhc
Q 022534 84 ---DDFDFTENEFHEELDKLLDVLEVKYPFFLVVQGFLVG-SYGLTWALKNPSRISKLAILNSPLTASSPLPGLFQQLRI 159 (295)
Q Consensus 84 ---~~~~~~~~~~~~~l~~~~~~l~~~~~~~lv~~G~~~G-~~~~~~a~~~p~~v~~lil~~~p~~~~~~~~~~~~~~~~ 159 (295)
+-..+++.|.++.-..++++||+++...++ |+|+| +.++.||..||++|+++|.+++.......... +.....
T Consensus 108 yg~~FP~~ti~D~v~aq~~ll~~LGI~~l~aVi--G~SmGGmqal~wa~~~Pd~v~~li~Ia~~~~~s~~~~a-~~~~~~ 184 (376)
T d2vata1 108 YGAKFPRTTIRDDVRIHRQVLDRLGVRQIAAVV--GASMGGMHTLEWAFFGPEYVRKIVPIATSCRQSGWCAA-WFETQR 184 (376)
T ss_dssp CGGGCCCCCHHHHHHHHHHHHHHHTCCCEEEEE--EETHHHHHHHHHGGGCTTTBCCEEEESCCSBCCHHHHH-HHHHHH
T ss_pred ccccCCcchhHHHHHHHHHHHHHhCcceEEEee--cccHHHHHHHHHHHhchHHHhhhcccccccccchHHHH-HHHHHH
Confidence 011458899999999999999999743333 45554 66999999999999999988765432211000 000000
Q ss_pred ------c-cc-hhh-------------------hhh-hHHHHHHHHHhCCC---cccc-cc-cccccccc---ccccCCc
Q 022534 160 ------P-LL-GEF-------------------TAQ-NAIMAERFIEAGSP---YVLK-LD-KADVYRLP---YLASSGP 203 (295)
Q Consensus 160 ------~-~~-~~~-------------------~~~-~~~~~~~~~~~~~~---~~~~-~~-~~~~~~~~---~~~~~~~ 203 (295)
| +. +.+ ... ...+.++|...... ..+. .. ..+..... ......+
T Consensus 185 ~ai~~Dp~w~~G~Y~~~~~p~~GL~~Ar~~~~~ty~S~~~~~~rf~~~~~~~~gr~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (376)
T d2vata1 185 QCIYDDPKYLDGEYDVDDQPVRGLETARKIANLTYKSKPAMDERFHMAPGVQAGRNISSQDAKKEINGTDSGNSHRAGQP 264 (376)
T ss_dssp HHHHHSTTSGGGTCCTTSCCHHHHHHHHHHHHHHTSCHHHHHHHSCCCCCCC---------------------------C
T ss_pred HHhhccccccCCCccccchhHHHHHHHHHHHHHHhcCHHHHHHHHhhccccccccccccchhhhcccccccccccccccc
Confidence 0 00 000 000 00111111100000 0000 00 00000000 0000000
Q ss_pred hhH---HHH-----HHHhcchhhhh---H-----hhhcCcC------CCCCCCcEEEEEeCCCCCCCcchHHHHHhcCCC
Q 022534 204 GFA---LLE-----AARKVNFKDIS---S-----RIGAGFS------SGSWDKPVLVAWGISDKYLPQSVAEEFQKGNPN 261 (295)
Q Consensus 204 ~~~---~~~-----~~~~~~~~~~~---~-----~~~~~~~------~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~ 261 (295)
-+. ++. ...+.+....+ . .+..+.. .+.+++|+|+|.++.|.+.|++..+++++.+++
T Consensus 265 ~~~vesyL~~~g~k~~~rfDansyl~l~~a~d~~Di~~~~~g~l~~aL~~I~a~~LvI~~~sD~lFPp~~~~e~a~~l~~ 344 (376)
T d2vata1 265 IEAVSSYLRYQAQKFAASFDANCYIAMTLKFDTHDISRGRAGSIPEALAMITQPALIICARSDGLYSFDEHVEMGRSIPN 344 (376)
T ss_dssp GGGHHHHHHHHHHHHHHSSCHHHHHHHHHHHHTCBTTTTTCSSHHHHHTTCCSCEEEEECTTCSSSCHHHHHHHHHHSTT
T ss_pred hhHHHHHHHHHHhhhhcccccccHHHHHHHHHhcccccccCCCHHHHHhhCCCCEEEEEeCcccCcCHHHHHHHHHhcCC
Confidence 000 000 00101100000 0 0111100 247899999999999999999999999999997
Q ss_pred CeEEEEec-CCCCCCCCCChHHHHHHHHHHHHh
Q 022534 262 VVKLQMIE-GAGHMPQEDWPEKVVDGLRYFFLN 293 (295)
Q Consensus 262 ~~~~~~i~-~~gH~~~~e~p~~~~~~i~~fl~~ 293 (295)
+++.+|+ ..||-..+..++.+.+.|++||++
T Consensus 345 -a~~~~I~S~~GHDaFL~e~~~~~~~I~~FL~q 376 (376)
T d2vata1 345 -SRLCVVDTNEGHDFFVMEADKVNDAVRGFLDQ 376 (376)
T ss_dssp -EEEEECCCSCGGGHHHHTHHHHHHHHHHHHTC
T ss_pred -CeEEEECCCCCccccccCHHHHHHHHHHHHcC
Confidence 7999998 789976666799999999999974
|
| >d2hu7a2 c.69.1.33 (A:322-581) Acylamino-acid-releasing enzyme, C-terminal donain {Aeropyrum pernix [TaxId: 56636]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acylamino-acid-releasing enzyme, C-terminal donain domain: Acylamino-acid-releasing enzyme, C-terminal donain species: Aeropyrum pernix [TaxId: 56636]
Probab=99.76 E-value=1.1e-17 Score=139.58 Aligned_cols=228 Identities=15% Similarity=0.111 Sum_probs=129.1
Q ss_pred eEEeCcEEEEEEEcCC--CCCCCceEEEEcCC--CCCCccchhhHHHhhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCC-
Q 022534 15 YIKSGEYRWFVRETGS--ADSRLGTIVFLHGA--PSHSYSYRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFT- 89 (295)
Q Consensus 15 ~~~~~~~~~~~~~~g~--~~~~~~~vv~lHG~--~~~~~~w~~~~~~l~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~- 89 (295)
|-+.+|.++....+-+ .+.+.|+||++||+ ......|...+..|+++||.|+++|.||+|.+..........++.
T Consensus 17 ~~s~dG~~i~~~l~~p~~~~~~~Pviv~~HGG~~~~~~~~~~~~~~~la~~G~~v~~~d~r~~~~~g~~~~~~~~~~~~~ 96 (260)
T d2hu7a2 17 VESFDGSRVPTYVLESGRAPTPGPTVVLVHGGPFAEDSDSWDTFAASLAAAGFHVVMPNYRGSTGYGEEWRLKIIGDPCG 96 (260)
T ss_dssp EECTTSCEEEEEEEEETTSCSSEEEEEEECSSSSCCCCSSCCHHHHHHHHHTCEEEEECCTTCSSSCHHHHHTTTTCTTT
T ss_pred EECCCCCEEEEEEEeCCCCCCCceEEEEECCCCccCCCccccHHHHHHHhhccccccceeeeccccccccccccccccch
Confidence 4455676665543322 22345789999984 445567888888898889999999999998876421110011111
Q ss_pred --HHHHHHHHHHHHHHhCCCCceEEEEecccchH-HHHHHHHhCcCccceeEEEcCCCCCCCCCchhhhhhhcccchhhh
Q 022534 90 --ENEFHEELDKLLDVLEVKYPFFLVVQGFLVGS-YGLTWALKNPSRISKLAILNSPLTASSPLPGLFQQLRIPLLGEFT 166 (295)
Q Consensus 90 --~~~~~~~l~~~~~~l~~~~~~~lv~~G~~~G~-~~~~~a~~~p~~v~~lil~~~p~~~~~~~~~~~~~~~~~~~~~~~ 166 (295)
.+++...+..+.+... ...+.++ |+|+|+ .++..+..+|+.+++++..+ |.... .... .. .
T Consensus 97 ~~~~D~~~~~~~l~~~~~-~~~~~i~--g~s~gg~~~~~~~~~~~~~~~a~i~~~-~~~~~---~~~~-~~----~---- 160 (260)
T d2hu7a2 97 GELEDVSAAARWARESGL-ASELYIM--GYSYGGYMTLCALTMKPGLFKAGVAGA-SVVDW---EEMY-EL----S---- 160 (260)
T ss_dssp HHHHHHHHHHHHHHHTTC-EEEEEEE--EETHHHHHHHHHHHHSTTSSSEEEEES-CCCCH---HHHH-HT----C----
T ss_pred hhhhhhcccccccccccc-cceeecc--ccccccccccchhccCCcccccccccc-cchhh---hhhh-cc----c----
Confidence 1223332322222222 2234444 556654 45566778999999887664 33210 0000 00 0
Q ss_pred hhhHHHHHHHHHhCCCccccccccccccccccccCCchhHHHHHHHhcchhhhhHhhhcCcCCCCCCCcEEEEEeCCCCC
Q 022534 167 AQNAIMAERFIEAGSPYVLKLDKADVYRLPYLASSGPGFALLEAARKVNFKDISSRIGAGFSSGSWDKPVLVAWGISDKY 246 (295)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~ 246 (295)
... ...+.... . ... .. .....+... .+ .++++|+|+++|++|++
T Consensus 161 --~~~-~~~~~~~~----~-~~~---------------~~---~~~~~~~~~---~~------~~~~~P~liihG~~D~~ 205 (260)
T d2hu7a2 161 --DAA-FRNFIEQL----T-GGS---------------RE---IMRSRSPIN---HV------DRIKEPLALIHPQNDSR 205 (260)
T ss_dssp --CHH-HHHHHHHH----H-CSC---------------HH---HHHHTCGGG---CG------GGCCSCEEEEEETTCSS
T ss_pred --ccc-cccccccc----c-ccc---------------cc---cccccchhh---cc------cccCCCceeeecccCce
Confidence 000 00000000 0 000 00 011111111 11 25679999999999999
Q ss_pred CCcchHHHHHhcC---CCCeEEEEecCCCCCC-CCCChHHHHHHHHHHHHh
Q 022534 247 LPQSVAEEFQKGN---PNVVKLQMIEGAGHMP-QEDWPEKVVDGLRYFFLN 293 (295)
Q Consensus 247 ~~~~~~~~~~~~~---~~~~~~~~i~~~gH~~-~~e~p~~~~~~i~~fl~~ 293 (295)
+|++.+.++.+.+ ...++++++||++|.. ..|+...+...+.+||.+
T Consensus 206 vp~~~~~~~~~~l~~~~~~~~~~~~~g~~H~~~~~e~~~~~~~~~~~fl~~ 256 (260)
T d2hu7a2 206 TPLKPLLRLMGELLARGKTFEAHIIPDAGHAINTMEDAVKILLPAVFFLAT 256 (260)
T ss_dssp SCSHHHHHHHHHHHHTTCCEEEEEETTCCSSCCBHHHHHHHHHHHHHHHHH
T ss_pred ecHHHHHHHHHHHHHCCCCeEEEEECcCCCCCCChHhHHHHHHHHHHHHHH
Confidence 9999888886532 3347999999999976 446677888888899875
|
| >d2b61a1 c.69.1.40 (A:2-358) Homoserine O-acetyltransferase {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: O-acetyltransferase domain: Homoserine O-acetyltransferase species: Haemophilus influenzae [TaxId: 727]
Probab=99.75 E-value=1.3e-17 Score=144.38 Aligned_cols=270 Identities=11% Similarity=0.110 Sum_probs=150.3
Q ss_pred CcEEEEEEEcCCCCCC-CceEEEEcCCCCCCcc---------chhhHH---HhhhCCCeEEEeCCCCCCCCCCCCCCC--
Q 022534 19 GEYRWFVRETGSADSR-LGTIVFLHGAPSHSYS---------YRNVMS---QMSDAGFHCFAPDWLGFGFSDKPEKGY-- 83 (295)
Q Consensus 19 ~~~~~~~~~~g~~~~~-~~~vv~lHG~~~~~~~---------w~~~~~---~l~~~~~~via~Dl~G~G~S~~~~~~~-- 83 (295)
.+.++.|+.+|...+. .++||+.|++.+++.. |..++- .|....|.||++|++|.|.|+.+....
T Consensus 22 ~~~~laY~t~G~ln~~~~NaVlv~h~~tg~~~~~~~~~~~gWW~~liG~g~alDt~kyfVI~~n~lG~~~gSs~p~s~~p 101 (357)
T d2b61a1 22 SYINVAYQTYGTLNDEKNNAVLICHALTGDAEPYFDDGRDGWWQNFMGAGLALDTDRYFFISSNVLGGCKGTTGPSSINP 101 (357)
T ss_dssp CSEEEEEEEESCCCTTCCCEEEEECCTTCCSCSCCSSSCCCTTGGGEETTSSEETTTCEEEEECCTTCSSSSSCTTSBCT
T ss_pred CCceEEEEeecccCCCCCCEEEEcCCCCccccccccCCCCCcHHHhcCCCCccCCCceEEEEecccCCccccCCcCCCCC
Confidence 3599999999964322 3689999999876543 555552 344457999999999988765322110
Q ss_pred --------CCCCCCHHHHHHHHHHHHHHhCCCCceEEEEecccc-hHHHHHHHHhCcCccceeEEEcCCCCCCCCCchhh
Q 022534 84 --------DDFDFTENEFHEELDKLLDVLEVKYPFFLVVQGFLV-GSYGLTWALKNPSRISKLAILNSPLTASSPLPGLF 154 (295)
Q Consensus 84 --------~~~~~~~~~~~~~l~~~~~~l~~~~~~~lv~~G~~~-G~~~~~~a~~~p~~v~~lil~~~p~~~~~~~~~~~ 154 (295)
+-..+++.|.++....++++||+++...++ |.|| |+.|+.+|..||+.|+++|.+++......... .+
T Consensus 102 ~tg~~~g~~FP~iti~D~v~aq~~Ll~~LGI~~l~~vi--G~SmGGmqAl~wa~~~Pd~v~~~i~i~~~a~~s~~~~-~~ 178 (357)
T d2b61a1 102 QTGKPYGSQFPNIVVQDIVKVQKALLEHLGISHLKAII--GGSFGGMQANQWAIDYPDFMDNIVNLCSSIYFSAEAI-GF 178 (357)
T ss_dssp TTSSBCGGGCCCCCHHHHHHHHHHHHHHTTCCCEEEEE--EETHHHHHHHHHHHHSTTSEEEEEEESCCSSCCHHHH-HH
T ss_pred CCCCCCCcccccchhHHHHHHHHHHHHHhCcceEEEEe--cccHHHHHHHHHHHhhhHHHhhhcccccccccchhHH-HH
Confidence 012468899999999999999999743333 4455 46799999999999999998866443211100 00
Q ss_pred hh-----hhc-c-cc-hhhh----hhhHHHHHHHHH---hCCCcccc----cc---cc----ccccc---------cccc
Q 022534 155 QQ-----LRI-P-LL-GEFT----AQNAIMAERFIE---AGSPYVLK----LD---KA----DVYRL---------PYLA 199 (295)
Q Consensus 155 ~~-----~~~-~-~~-~~~~----~~~~~~~~~~~~---~~~~~~~~----~~---~~----~~~~~---------~~~~ 199 (295)
.. +.. | +. +.+. ....+...+.+. ...+..++ .. .. +.+.. .+..
T Consensus 179 ~~~~~~aI~~Dp~~~~G~Y~~~~~p~~GL~~Ar~~a~~ty~s~~~~~~~f~r~~~~~~~~~~~~~~vesyL~~~g~kf~~ 258 (357)
T d2b61a1 179 NHVMRQAVINDPNFNGGDYYEGTPPDQGLSIARMLGMLTYRTDLQLAKAFGRATKSDGSFWGDYFQVESYLSYQGKKFLE 258 (357)
T ss_dssp HHHHHHHHHTSTTCGGGCCTTSCCCHHHHHHHHHHHHHHHSCHHHHHHHTTTCBCTTCCTTSCCBHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHcCCCCCCCCcccCCCchhHHHHHHHHHHhhccCHHHHHHHhccccccccccccchhhHHHHHHHHHHHHHh
Confidence 00 000 0 00 0000 000111111110 00000000 00 00 00000 0000
Q ss_pred cCCch-hH-HHHHHHhcchhhhhHhhhcCcCCCCCCCcEEEEEeCCCCCCCcchHHHHHhcCC---CCeEEEEecCC-CC
Q 022534 200 SSGPG-FA-LLEAARKVNFKDISSRIGAGFSSGSWDKPVLVAWGISDKYLPQSVAEEFQKGNP---NVVKLQMIEGA-GH 273 (295)
Q Consensus 200 ~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~~---~~~~~~~i~~~-gH 273 (295)
..++. +. +.......+.......+... .+++++|+|+|..+.|.+.|++..++.++.++ .++++++|+.. ||
T Consensus 259 rfDan~yl~l~~a~~~~D~~~~~~~l~~a--L~~I~a~vLvi~~~sD~lFpp~~~~~~a~~l~~~~~~v~~~~I~S~~GH 336 (357)
T d2b61a1 259 RFDANSYLHLLRALDMYDPSLGYENVKEA--LSRIKARYTLVSVTTDQLFKPIDLYKSKQLLEQSGVDLHFYEFPSDYGH 336 (357)
T ss_dssp TCCHHHHHHHHHHHHHCCTTTTSSCHHHH--HTTCCSEEEEEEETTCSSSCHHHHHHHHHHHHHTTCEEEEEEECCTTGG
T ss_pred hCCHHHHHHHHHHhhhcccccccccHHHH--HhhcCCCEEEEEeCCccccCHHHHHHHHHHHHhcCCCeEEEEECCCCCc
Confidence 00000 00 00000000000000000000 24789999999999999999988777776554 23688889877 99
Q ss_pred CCCCCChHHHHHHHHHHHHh
Q 022534 274 MPQEDWPEKVVDGLRYFFLN 293 (295)
Q Consensus 274 ~~~~e~p~~~~~~i~~fl~~ 293 (295)
...+..++++.+.|++||++
T Consensus 337 dafL~e~~~~~~~I~~fL~~ 356 (357)
T d2b61a1 337 DAFLVDYDQFEKRIRDGLAG 356 (357)
T ss_dssp GHHHHCHHHHHHHHHHHHHT
T ss_pred cccCcCHHHHHHHHHHHHcc
Confidence 87666789999999999974
|
| >d2pl5a1 c.69.1.40 (A:5-366) Homoserine O-acetyltransferase {Leptospira interrogans [TaxId: 173]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: O-acetyltransferase domain: Homoserine O-acetyltransferase species: Leptospira interrogans [TaxId: 173]
Probab=99.74 E-value=8.8e-17 Score=139.43 Aligned_cols=283 Identities=17% Similarity=0.169 Sum_probs=160.3
Q ss_pred cccccccceeeEEeC-----cEEEEEEEcCCCCCC-CceEEEEcCCCCCC-------------ccchhhHH---HhhhCC
Q 022534 5 IENKGREYGSYIKSG-----EYRWFVRETGSADSR-LGTIVFLHGAPSHS-------------YSYRNVMS---QMSDAG 62 (295)
Q Consensus 5 ~~~~~~~~~~~~~~~-----~~~~~~~~~g~~~~~-~~~vv~lHG~~~~~-------------~~w~~~~~---~l~~~~ 62 (295)
+|.+.-+++.|.--+ +.++.|+.+|..... .++||+.|++.+++ ..|..++- .|....
T Consensus 6 ~~~~~~~~~~f~le~G~~l~~~~l~Y~t~G~ln~~~~NaVlv~h~~tG~~~~~g~~~~~~~~~gww~~liG~g~~lDt~~ 85 (362)
T d2pl5a1 6 IETKYAEFKELILNNGSVLSPVVIAYETYGTLSSSKNNAILICHALSGDAHAAGYHSGSDKKPGWWDDYIGPGKSFDTNQ 85 (362)
T ss_dssp CCCEEEEESCEECTTSCEESSEEEEEEEEECCCTTSCCEEEEECCSSCCSCCSSBSSTTCSSCCTTTTTEETTSSEETTT
T ss_pred eeeeEEecCCeecCCCCCcCCceEEEEeeeccCCCCCCEEEECCCCCcchhccccCCccCCCcchHHHhcCCCCccCccc
Confidence 455555555555433 489999999964322 35899999998764 34665552 244457
Q ss_pred CeEEEeCCCCCCCCCCCCCCC----------CCCCCCHHHHHHHHHHHHHHhCCCCceEEEEecccch-HHHHHHHHhCc
Q 022534 63 FHCFAPDWLGFGFSDKPEKGY----------DDFDFTENEFHEELDKLLDVLEVKYPFFLVVQGFLVG-SYGLTWALKNP 131 (295)
Q Consensus 63 ~~via~Dl~G~G~S~~~~~~~----------~~~~~~~~~~~~~l~~~~~~l~~~~~~~lv~~G~~~G-~~~~~~a~~~p 131 (295)
|-||++|+.|.|.|+.+.... +-...++.|.++.-..+++++|+++.. +|. |.|+| +.++.||..||
T Consensus 86 yfVI~~n~lG~~~~ss~~~s~~p~~~~~yg~~fP~~t~~D~v~~~~~ll~~LGI~~l~-~vi-G~SmGGmqAl~wA~~yP 163 (362)
T d2pl5a1 86 YFIICSNVIGGCKGSSGPLSIHPETSTPYGSRFPFVSIQDMVKAQKLLVESLGIEKLF-CVA-GGSMGGMQALEWSIAYP 163 (362)
T ss_dssp CEEEEECCTTCSSSSSSTTSBCTTTSSBCGGGSCCCCHHHHHHHHHHHHHHTTCSSEE-EEE-EETHHHHHHHHHHHHST
T ss_pred cEEEeeccccCcccccCccccccccccccCcCCccchhHHHHHHHHHHHHHhCcCeeE-EEe-ehhHHHHHHHHHHHhCc
Confidence 999999999999887532110 011347888999999999999999744 433 45555 56999999999
Q ss_pred CccceeEEEcCCCCCCCCCchhhhhhhc------c-cc-hhh------------------hhh-hHHHHHHHHHhCCC-c
Q 022534 132 SRISKLAILNSPLTASSPLPGLFQQLRI------P-LL-GEF------------------TAQ-NAIMAERFIEAGSP-Y 183 (295)
Q Consensus 132 ~~v~~lil~~~p~~~~~~~~~~~~~~~~------~-~~-~~~------------------~~~-~~~~~~~~~~~~~~-~ 183 (295)
+.|+++|.+++......... .+..... | +. +.+ ... ...+.++|...... .
T Consensus 164 d~v~~~v~ia~sa~~s~~~~-~~~~~~~~aI~~Dp~~~~G~Y~~~~P~~GL~~AR~~~~~~y~s~~~~~~~f~~~~~~~~ 242 (362)
T d2pl5a1 164 NSLSNCIVMASTAEHSAMQI-AFNEVGRQAILSDPNWKNGLYDENSPRKGLALARMVGHITYLSDDKMREKFGRNPPRGN 242 (362)
T ss_dssp TSEEEEEEESCCSBCCHHHH-HHHHHHHHHHHTSTTCGGGTCSSSCCHHHHHHHHHHHHHTTBCHHHHHHHHTTSCCSSC
T ss_pred hHhhhhcccccccccCHHHH-HHHHHHHHHHhcCCccccCCcccCChhHHHHHHHHHHHHHHcCchhhhhhhcccccccc
Confidence 99999998876443211000 0000000 0 00 000 000 00111122110000 0
Q ss_pred ccc-ccccccc-cc---cccccCCch-hH-HHHHHHhcchhhhhHhhhcCcCCCCCCCcEEEEEeCCCCCCCcchHHHHH
Q 022534 184 VLK-LDKADVY-RL---PYLASSGPG-FA-LLEAARKVNFKDISSRIGAGFSSGSWDKPVLVAWGISDKYLPQSVAEEFQ 256 (295)
Q Consensus 184 ~~~-~~~~~~~-~~---~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~ 256 (295)
... ....+.+ .. .+....++. +. +.......+.... ..+... .+++++|+|+|..+.|.++|++..++++
T Consensus 243 ~~~~~~~ve~yl~~~g~k~~~rfDan~yl~l~~a~~~~Di~~~-~~l~~a--L~~I~AkvLvi~~~sD~lFpp~~~~~~a 319 (362)
T d2pl5a1 243 ILSTDFAVGSYLIYQGESFVDRFDANSYIYVTKALDHYSLGKG-KELTAA--LSNATCRFLVVSYSSDWLYPPAQSREIV 319 (362)
T ss_dssp TTTTTTTSCGGGGSTTCCSSSCCCHHHHHHHHHHHHHCBCCSH-HHHHHH--HTTCCSEEEEEEETTCCSSCHHHHHHHH
T ss_pred ccchhHHHHHHHHHHHHHHHhcCCHHHHHHHHhhhhccccccc-ccHHHH--HhhCCCCEEEEEeCcccCcCHHHHHHHH
Confidence 000 0000000 00 001111111 11 1111111111110 011111 2378999999999999999999988888
Q ss_pred hcCCC---CeEEEEe-cCCCCCCCCCChHHHHHHHHHHHHh
Q 022534 257 KGNPN---VVKLQMI-EGAGHMPQEDWPEKVVDGLRYFFLN 293 (295)
Q Consensus 257 ~~~~~---~~~~~~i-~~~gH~~~~e~p~~~~~~i~~fl~~ 293 (295)
+.+++ ++++++| -..||...+..++++.+.|++||+.
T Consensus 320 ~~l~~a~~~v~~~eI~S~~GHdaFL~e~~~~~~~I~~FL~~ 360 (362)
T d2pl5a1 320 KSLEAADKRVFYVELQSGEGHDSFLLKNPKQIEILKGFLEN 360 (362)
T ss_dssp HHHHHTTCCEEEEEECCCBSSGGGGSCCHHHHHHHHHHHHC
T ss_pred HHHHhCCCCeEEEEeCCCCCcchhccCHHHHHHHHHHHHcC
Confidence 77653 2456555 5679998888899999999999975
|
| >d1vlqa_ c.69.1.25 (A:) Acetyl xylan esterase TM0077 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetyl xylan esterase-like domain: Acetyl xylan esterase TM0077 species: Thermotoga maritima [TaxId: 2336]
Probab=99.71 E-value=1.3e-16 Score=136.59 Aligned_cols=216 Identities=12% Similarity=0.046 Sum_probs=116.6
Q ss_pred EEeCcEEEEEEEcCCC--CCCCceEEEEcCCCCCCccchhhHHHhhhCCCeEEEeCCCCCCCCCCCCCCCC--C------
Q 022534 16 IKSGEYRWFVRETGSA--DSRLGTIVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYD--D------ 85 (295)
Q Consensus 16 ~~~~~~~~~~~~~g~~--~~~~~~vv~lHG~~~~~~~w~~~~~~l~~~~~~via~Dl~G~G~S~~~~~~~~--~------ 85 (295)
-+.+|.+++..-..+. +.+.|+||++||++.+...|.... .|+++||.|+++|+||||.|..+..... .
T Consensus 61 ~s~dG~~l~~~l~~P~~~~~~~P~Vv~~hG~~~~~~~~~~~~-~~a~~G~~v~~~D~rG~G~s~~~~~~~~~~~~~~~~~ 139 (322)
T d1vlqa_ 61 SGYRGQRIKGWLLVPKLEEEKLPCVVQYIGYNGGRGFPHDWL-FWPSMGYICFVMDTRGQGSGWLKGDTPDYPEGPVDPQ 139 (322)
T ss_dssp ECGGGCEEEEEEEEECCSCSSEEEEEECCCTTCCCCCGGGGC-HHHHTTCEEEEECCTTCCCSSSCCCCCBCCSSSBCCC
T ss_pred ECCCCcEEEEEEEeccCCCCCccEEEEecCCCCCcCcHHHHH-HHHhCCCEEEEeeccccCCCCCCcccccccccccccc
Confidence 3446777876655432 233578999999988877776554 5667899999999999999975421100 0
Q ss_pred ------------CCCCHHHHHHHHHHHHHHhC----CC-CceEEEEecccchH-HHHHHHHhCcCccceeEEEcCCCCCC
Q 022534 86 ------------FDFTENEFHEELDKLLDVLE----VK-YPFFLVVQGFLVGS-YGLTWALKNPSRISKLAILNSPLTAS 147 (295)
Q Consensus 86 ------------~~~~~~~~~~~l~~~~~~l~----~~-~~~~lv~~G~~~G~-~~~~~a~~~p~~v~~lil~~~p~~~~ 147 (295)
..+.......|+...++.+. .+ ..+.++ |+|.|+ +++..+...| ++++++.. +|....
T Consensus 140 ~~~~~~~g~~~~~~~~~~~~~~d~~~a~~~~~~~~~~d~~ri~~~--G~S~GG~~a~~~~~~~~-~~~a~v~~-~~~~~~ 215 (322)
T d1vlqa_ 140 YPGFMTRGILDPRTYYYRRVFTDAVRAVEAAASFPQVDQERIVIA--GGSQGGGIALAVSALSK-KAKALLCD-VPFLCH 215 (322)
T ss_dssp CSSSTTTTTTCTTTCHHHHHHHHHHHHHHHHHTSTTEEEEEEEEE--EETHHHHHHHHHHHHCS-SCCEEEEE-SCCSCC
T ss_pred ccchhhhchhhhhhhhhHHHHHHHHHHHHHHHhcCCcCchhcccc--ccccchHHHHHHHhcCC-CccEEEEe-CCcccc
Confidence 00011122344444444432 11 113333 667654 4555455555 67877654 333211
Q ss_pred CCCchhhhhhhcccchhhhhhhHHHHHHHHHhCCCccccccccccccccccccCCchhHHHHHHHhcchhhhhHhhhcCc
Q 022534 148 SPLPGLFQQLRIPLLGEFTAQNAIMAERFIEAGSPYVLKLDKADVYRLPYLASSGPGFALLEAARKVNFKDISSRIGAGF 227 (295)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (295)
...... .... ... .. ...+..... .............+ ....+
T Consensus 216 ---~~~~~~-~~~~---~~~-~~--~~~~~~~~~--------------------~~~~~~~~~~~~~d---~~~~a---- 258 (322)
T d1vlqa_ 216 ---FRRAVQ-LVDT---HPY-AE--ITNFLKTHR--------------------DKEEIVFRTLSYFD---GVNFA---- 258 (322)
T ss_dssp ---HHHHHH-HCCC---TTH-HH--HHHHHHHCT--------------------TCHHHHHHHHHTTC---HHHHH----
T ss_pred ---HHHHHh-hccc---cch-hh--HHhhhhcCc--------------------chhhhHHHHhhhhh---HHHHH----
Confidence 000000 0000 000 00 001110000 00000111111111 11111
Q ss_pred CCCCCCCcEEEEEeCCCCCCCcchHHHHHhcCCCCeEEEEecCCCCCC
Q 022534 228 SSGSWDKPVLVAWGISDKYLPQSVAEEFQKGNPNVVKLQMIEGAGHMP 275 (295)
Q Consensus 228 ~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~ 275 (295)
.++++|+|+++|++|.++|++.+..+.+.++..++++++|+++|..
T Consensus 259 --~~i~~P~Lv~~G~~D~~vp~~~~~~~~~~~~~~~~l~~~p~~~H~~ 304 (322)
T d1vlqa_ 259 --ARAKIPALFSVGLMDNICPPSTVFAAYNYYAGPKEIRIYPYNNHEG 304 (322)
T ss_dssp --TTCCSCEEEEEETTCSSSCHHHHHHHHHHCCSSEEEEEETTCCTTT
T ss_pred --hcCCCCEEEEEeCCCCCcCHHHHHHHHHHCCCCeEEEEECCCCCCC
Confidence 2678999999999999999999988888777668999999999964
|
| >d1mo2a_ c.69.1.22 (A:) Erythromycin polyketide synthase {Saccharopolyspora erythraea [TaxId: 1836]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterase domain of polypeptide, polyketide and fatty acid synthases domain: Erythromycin polyketide synthase species: Saccharopolyspora erythraea [TaxId: 1836]
Probab=99.68 E-value=8.6e-16 Score=127.76 Aligned_cols=207 Identities=10% Similarity=0.068 Sum_probs=126.4
Q ss_pred CceEEEEcCC--CCCCccchhhHHHhhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCceEE
Q 022534 35 LGTIVFLHGA--PSHSYSYRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEELDKLLDVLEVKYPFFL 112 (295)
Q Consensus 35 ~~~vv~lHG~--~~~~~~w~~~~~~l~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~~l 112 (295)
+|+|+|+||+ +++...|..+++.|.. .+.|+++|+||||.++... .+++++++++.+.+....-..|++|
T Consensus 42 ~~~l~c~~~~~~gg~~~~y~~La~~L~~-~~~V~al~~pG~~~~e~~~-------~s~~~~a~~~~~~i~~~~~~~P~~L 113 (255)
T d1mo2a_ 42 EVTVICCAGTAAISGPHEFTRLAGALRG-IAPVRAVPQPGYEEGEPLP-------SSMAAVAAVQADAVIRTQGDKPFVV 113 (255)
T ss_dssp SSEEEEECCCSSSCSGGGGHHHHHHHTT-TCCEEEECCTTSSTTCCEE-------SSHHHHHHHHHHHHHHTTSSSCEEE
T ss_pred CCeEEEECCCCCCCCHHHHHHHHHhcCC-CceEEEEeCCCcCCCCCCC-------CCHHHHHHHHHHHHHHhCCCCCEEE
Confidence 5789999994 5677899999999986 6899999999999887432 2678899988776655434567878
Q ss_pred EEecccch-HHHHHHHHh---CcCccceeEEEcCCCCCCCCCchhhhhhhcccchhhhhhhHHHHHHHHHhCCCcccccc
Q 022534 113 VVQGFLVG-SYGLTWALK---NPSRISKLAILNSPLTASSPLPGLFQQLRIPLLGEFTAQNAIMAERFIEAGSPYVLKLD 188 (295)
Q Consensus 113 v~~G~~~G-~~~~~~a~~---~p~~v~~lil~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (295)
+ |||+| .+|..+|.+ ..++|..+++++++... ..... ........... ...
T Consensus 114 ~--GhS~Gg~vA~e~A~~l~~~g~~v~~lvlld~~~p~------~~~~~------------~~~~~~~~~~~----~~~- 168 (255)
T d1mo2a_ 114 A--GHSAGALMAYALATELLDRGHPPRGVVLIDVYPPG------HQDAM------------NAWLEELTATL----FDR- 168 (255)
T ss_dssp E--ECSTTHHHHHHHHHHHHHHTCCCSEEEEEECSCSS------HHHHH------------HHHHHHHHTTC----C---
T ss_pred E--EeCCcHHHHHHHHHhhHhcCCCccEEEEECCCCCC------Cccch------------hhHHHHHHHHh----hcc-
Confidence 7 77776 467777764 34568999998764321 00000 00000000000 000
Q ss_pred ccccccccccccCCchhHHHHHHHhcchhhhhHhhhcCcCCCCCCCcEEEEEeCCCCCCCcchHHHHHhcCCCCeEEEEe
Q 022534 189 KADVYRLPYLASSGPGFALLEAARKVNFKDISSRIGAGFSSGSWDKPVLVAWGISDKYLPQSVAEEFQKGNPNVVKLQMI 268 (295)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~i 268 (295)
..... ....+ ..+. ... ++...+....+.+|++++.+++|...... ...........+++.+
T Consensus 169 --~~~~~-------~~~~l-~a~~-----~~~-~~~~~~~~~~~~~p~l~v~a~~~~~~~~~--~~w~~~~~~~~~~~~v 230 (255)
T d1mo2a_ 169 --ETVRM-------DDTRL-TALG-----AYD-RLTGQWRPRETGLPTLLVSAGEPMGPWPD--DSWKPTWPFEHDTVAV 230 (255)
T ss_dssp ----CCC-------CHHHH-HHHH-----HHH-HHHHHCCCCCCCCCEEEEECCSSSSCCTT--CCCCCCCCSSCEEEEC
T ss_pred --ccccC-------CHHHH-HHHH-----HHH-HHHhcCCCccccceEEEeecCCCCCcchh--hHHHHhCCCCcEEEEE
Confidence 00000 00011 1110 000 11122333467899999999888544322 2334445445799999
Q ss_pred cCCCCCCC-CCChHHHHHHHHHHHHh
Q 022534 269 EGAGHMPQ-EDWPEKVVDGLRYFFLN 293 (295)
Q Consensus 269 ~~~gH~~~-~e~p~~~~~~i~~fl~~ 293 (295)
++ +|+.+ .|+++++++.|++||.+
T Consensus 231 ~G-~H~~ml~~~~~~~A~~i~~~L~G 255 (255)
T d1mo2a_ 231 PG-DHFTMVQEHADAIARHIDAWLGG 255 (255)
T ss_dssp CS-CCSSCSSCCHHHHHHHHHHHHTC
T ss_pred CC-CCcccccccHHHHHHHHHHHhCc
Confidence 86 89855 46899999999999963
|
| >d1cvla_ c.69.1.18 (A:) Lipase {Chromobacterium viscosum [TaxId: 42739]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Bacterial lipase domain: Lipase species: Chromobacterium viscosum [TaxId: 42739]
Probab=99.64 E-value=4.9e-16 Score=133.47 Aligned_cols=101 Identities=15% Similarity=0.280 Sum_probs=83.6
Q ss_pred CceEEEEcCCCCCCcc------chhhHHHhhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCC
Q 022534 35 LGTIVFLHGAPSHSYS------YRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEELDKLLDVLEVKY 108 (295)
Q Consensus 35 ~~~vv~lHG~~~~~~~------w~~~~~~l~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~ 108 (295)
+.||||+||++++... |..+.+.|+++||+|+++|+||||.|+.+.. +.++++++|.++++.++.++
T Consensus 8 k~PvvlvHG~~g~~~~~~~~~~~~~~~~~L~~~G~~V~~~~~~g~g~s~~~~~-------~~~~l~~~i~~~~~~~~~~~ 80 (319)
T d1cvla_ 8 RYPVILVHGLAGTDKFANVVDYWYGIQSDLQSHGAKVYVANLSGFQSDDGPNG-------RGEQLLAYVKQVLAATGATK 80 (319)
T ss_dssp SSCEEEECCTTBSSEETTTEESSTTHHHHHHHTTCCEEECCCBCSSCTTSTTS-------HHHHHHHHHHHHHHHHCCSC
T ss_pred CCCEEEECCCCCCcchhhhhhhHHHHHHHHHHCCCEEEEecCCCCCCCCCCcc-------cHHHHHHHHHHHHHHhCCCC
Confidence 4579999999887653 8889999999899999999999999986431 45788999999999998775
Q ss_pred ceEEEEecccchH-HHHHHHHhCcCccceeEEEcCCCC
Q 022534 109 PFFLVVQGFLVGS-YGLTWALKNPSRISKLAILNSPLT 145 (295)
Q Consensus 109 ~~~lv~~G~~~G~-~~~~~a~~~p~~v~~lil~~~p~~ 145 (295)
+++| |||+|+ ++..++.++|++|+++|++++|..
T Consensus 81 -v~lv--GhS~GG~~~~~~~~~~p~~v~~vv~i~~p~~ 115 (319)
T d1cvla_ 81 -VNLI--GHSQGGLTSRYVAAVAPQLVASVTTIGTPHR 115 (319)
T ss_dssp -EEEE--EETTHHHHHHHHHHHCGGGEEEEEEESCCTT
T ss_pred -EEEE--eccccHHHHHHHHHHCccccceEEEECCCCC
Confidence 7777 677765 566778899999999999987654
|
| >d1jfra_ c.69.1.16 (A:) Lipase {Streptomyces exfoliatus [TaxId: 1905]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Lipase domain: Lipase species: Streptomyces exfoliatus [TaxId: 1905]
Probab=99.63 E-value=1.1e-14 Score=121.15 Aligned_cols=179 Identities=16% Similarity=0.149 Sum_probs=116.6
Q ss_pred EEEEEEEcCCCCCCCceEEEEcCCCCCCccchhhHHHhhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH
Q 022534 21 YRWFVRETGSADSRLGTIVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEELDKL 100 (295)
Q Consensus 21 ~~~~~~~~g~~~~~~~~vv~lHG~~~~~~~w~~~~~~l~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~l~~~ 100 (295)
..++|-.. .++.+.|.||++||++++...+..+++.|+++||.|+++|++|++..... ...+....+..+
T Consensus 39 ~~ly~P~~-~~~g~~P~Vv~~HG~~g~~~~~~~~a~~lA~~Gy~V~~~d~~~~~~~~~~---------~~~d~~~~~~~l 108 (260)
T d1jfra_ 39 GTIYYPTS-TADGTFGAVVISPGFTAYQSSIAWLGPRLASQGFVVFTIDTNTTLDQPDS---------RGRQLLSALDYL 108 (260)
T ss_dssp EEEEEESC-CTTCCEEEEEEECCTTCCGGGTTTHHHHHHTTTCEEEEECCSSTTCCHHH---------HHHHHHHHHHHH
T ss_pred EEEEEcCC-CCCCCccEEEEECCCCCCHHHHHHHHHHHHhCCCEEEEEeeCCCcCCchh---------hHHHHHHHHHHH
Confidence 46776432 12223478999999999999999999999999999999999987654310 112333333333
Q ss_pred HHHh------CCCCceEEEEecccchHH-HHHHHHhCcCccceeEEEcCCCCCCCCCchhhhhhhcccchhhhhhhHHHH
Q 022534 101 LDVL------EVKYPFFLVVQGFLVGSY-GLTWALKNPSRISKLAILNSPLTASSPLPGLFQQLRIPLLGEFTAQNAIMA 173 (295)
Q Consensus 101 ~~~l------~~~~~~~lv~~G~~~G~~-~~~~a~~~p~~v~~lil~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (295)
.+.. +.++ +.++ |||+|+. ++..+...| ++++.+.+. +....
T Consensus 109 ~~~~~~~~~vD~~r-I~v~--G~S~GG~~al~aa~~~~-~~~A~v~~~-~~~~~-------------------------- 157 (260)
T d1jfra_ 109 TQRSSVRTRVDATR-LGVM--GHSMGGGGSLEAAKSRT-SLKAAIPLT-GWNTD-------------------------- 157 (260)
T ss_dssp HHTSTTGGGEEEEE-EEEE--EETHHHHHHHHHHHHCT-TCSEEEEES-CCCSC--------------------------
T ss_pred Hhhhhhhccccccc-eEEE--eccccchHHHHHHhhhc-cchhheeee-ccccc--------------------------
Confidence 3321 1122 3444 7777654 444444555 566666553 11100
Q ss_pred HHHHHhCCCccccccccccccccccccCCchhHHHHHHHhcchhhhhHhhhcCcCCCCCCCcEEEEEeCCCCCCCcch-H
Q 022534 174 ERFIEAGSPYVLKLDKADVYRLPYLASSGPGFALLEAARKVNFKDISSRIGAGFSSGSWDKPVLVAWGISDKYLPQSV-A 252 (295)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~~~~~-~ 252 (295)
. . ..++++|+|+++|++|.++|++. .
T Consensus 158 --------~-----------------------------------~----------~~~~~~P~l~i~G~~D~~vp~~~~~ 184 (260)
T d1jfra_ 158 --------K-----------------------------------T----------WPELRTPTLVVGADGDTVAPVATHS 184 (260)
T ss_dssp --------C-----------------------------------C----------CTTCCSCEEEEEETTCSSSCTTTTH
T ss_pred --------c-----------------------------------c----------ccccccceeEEecCCCCCCCHHHHH
Confidence 0 0 01347999999999999998865 5
Q ss_pred HHHHhcCCC--CeEEEEecCCCCCCCCCChHHHHHHHHHHHHh
Q 022534 253 EEFQKGNPN--VVKLQMIEGAGHMPQEDWPEKVVDGLRYFFLN 293 (295)
Q Consensus 253 ~~~~~~~~~--~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 293 (295)
..+++..+. ..+++.++|++|......-..+...+.+||+.
T Consensus 185 ~~~~~~~~~~~~~~~~~i~ga~H~~~~~~~~~~~~~~~~wl~~ 227 (260)
T d1jfra_ 185 KPFYESLPGSLDKAYLELRGASHFTPNTSDTTIAKYSISWLKR 227 (260)
T ss_dssp HHHHHHSCTTSCEEEEEETTCCTTGGGSCCHHHHHHHHHHHHH
T ss_pred HHHHHhcccCCCEEEEEECCCccCCCCCChHHHHHHHHHHHHH
Confidence 555555432 35789999999987666667788888899875
|
| >d2i3da1 c.69.1.36 (A:2-219) Hypothetical protein Atu1826 {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Atu1826-like domain: Hypothetical protein Atu1826 species: Agrobacterium tumefaciens [TaxId: 358]
Probab=99.63 E-value=5.4e-14 Score=113.91 Aligned_cols=190 Identities=14% Similarity=0.199 Sum_probs=117.0
Q ss_pred EEeCcEEEEEEEcCCCCCCCceEEEEcCCCC---C--CccchhhHHHhhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCCH
Q 022534 16 IKSGEYRWFVRETGSADSRLGTIVFLHGAPS---H--SYSYRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTE 90 (295)
Q Consensus 16 ~~~~~~~~~~~~~g~~~~~~~~vv~lHG~~~---~--~~~w~~~~~~l~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~ 90 (295)
++....++.....-++..+.+++|++||.+. + ......++..|.+.||.|+.+|+||.|.|+..... ..
T Consensus 5 i~g~~G~Le~~~~~~~~~~~~~~l~~Hp~p~~GG~~~~~~~~~~a~~l~~~G~~~lrfn~RG~g~S~G~~~~------~~ 78 (218)
T d2i3da1 5 FNGPAGRLEGRYQPSKEKSAPIAIILHPHPQFGGTMNNQIVYQLFYLFQKRGFTTLRFNFRSIGRSQGEFDH------GA 78 (218)
T ss_dssp EEETTEEEEEEEECCSSTTCCEEEEECCCGGGTCCTTSHHHHHHHHHHHHTTCEEEEECCTTSTTCCSCCCS------SH
T ss_pred EeCCCccEEEEEeCCCCCCCCEEEEECCCcCcCCcCCcHHHHHHHHHHHhcCeeEEEEecCccCCCcccccc------ch
Confidence 3444346665443333334579999998643 2 22234566778888999999999999999875321 11
Q ss_pred HHHHHHHHHHHH---HhC-CCCceEEEEecccchHH-HHHHHHhCcCccceeEEEcCCCCCCCCCchhhhhhhcccchhh
Q 022534 91 NEFHEELDKLLD---VLE-VKYPFFLVVQGFLVGSY-GLTWALKNPSRISKLAILNSPLTASSPLPGLFQQLRIPLLGEF 165 (295)
Q Consensus 91 ~~~~~~l~~~~~---~l~-~~~~~~lv~~G~~~G~~-~~~~a~~~p~~v~~lil~~~p~~~~~~~~~~~~~~~~~~~~~~ 165 (295)
.. .+|....++ ... ...+++++ |+|.|+. ++.++.+.+. +.+++++..+....
T Consensus 79 ~e-~~d~~aa~~~~~~~~~~~~~~~~~--g~S~G~~~a~~~a~~~~~-~~~~~~~~~~~~~~------------------ 136 (218)
T d2i3da1 79 GE-LSDAASALDWVQSLHPDSKSCWVA--GYSFGAWIGMQLLMRRPE-IEGFMSIAPQPNTY------------------ 136 (218)
T ss_dssp HH-HHHHHHHHHHHHHHCTTCCCEEEE--EETHHHHHHHHHHHHCTT-EEEEEEESCCTTTS------------------
T ss_pred hH-HHHHHHHHhhhhcccccccceeEE--eeehHHHHHHHHHHhhcc-ccceeecccccccc------------------
Confidence 11 223322222 222 23344444 6676654 4455556654 55566553211100
Q ss_pred hhhhHHHHHHHHHhCCCccccccccccccccccccCCchhHHHHHHHhcchhhhhHhhhcCcCCCCCCCcEEEEEeCCCC
Q 022534 166 TAQNAIMAERFIEAGSPYVLKLDKADVYRLPYLASSGPGFALLEAARKVNFKDISSRIGAGFSSGSWDKPVLVAWGISDK 245 (295)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~ 245 (295)
. . .. ...+.+|+++++|++|.
T Consensus 137 --------------~----------------~-------------------~~----------~~~~~~p~l~i~g~~D~ 157 (218)
T d2i3da1 137 --------------D----------------F-------------------SF----------LAPCPSSGLIINGDADK 157 (218)
T ss_dssp --------------C----------------C-------------------TT----------CTTCCSCEEEEEETTCS
T ss_pred --------------c----------------h-------------------hh----------ccccCCCceeeecccce
Confidence 0 0 00 00346899999999999
Q ss_pred CCCcchHHHHHhcC----CCCeEEEEecCCCCCCCCCChHHHHHHHHHHHHh
Q 022534 246 YLPQSVAEEFQKGN----PNVVKLQMIEGAGHMPQEDWPEKVVDGLRYFFLN 293 (295)
Q Consensus 246 ~~~~~~~~~~~~~~----~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 293 (295)
+++......+.+.. +...+++++||++|+.+ .+.+++.+.+.+||+.
T Consensus 158 ~~~~~~~~~l~~~~~~~~~~~~~~~vi~gAdHfF~-g~~~~l~~~v~~~l~~ 208 (218)
T d2i3da1 158 VAPEKDVNGLVEKLKTQKGILITHRTLPGANHFFN-GKVDELMGECEDYLDR 208 (218)
T ss_dssp SSCHHHHHHHHHHHTTSTTCCEEEEEETTCCTTCT-TCHHHHHHHHHHHHHH
T ss_pred ecChHHHHHHHHHHhhccCCCccEEEeCCCCCCCc-CCHHHHHHHHHHHHHH
Confidence 99988777765432 22358999999999876 6779999999999986
|
| >d3b5ea1 c.69.1.14 (A:7-215) Uncharacterized protein Mll8374 {Mesorhizobium loti [TaxId: 381]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase/thioesterase 1 domain: Uncharacterized protein Mll8374 species: Mesorhizobium loti [TaxId: 381]
Probab=99.59 E-value=2.6e-14 Score=115.01 Aligned_cols=182 Identities=13% Similarity=0.100 Sum_probs=112.4
Q ss_pred EEEEEcCCCCCCCceEEEEcCCCCCCccchhhHHHhhhCCCeEEEeCCCC----CCCCCCCCCCCCCCCCCHH-------
Q 022534 23 WFVRETGSADSRLGTIVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLG----FGFSDKPEKGYDDFDFTEN------- 91 (295)
Q Consensus 23 ~~~~~~g~~~~~~~~vv~lHG~~~~~~~w~~~~~~l~~~~~~via~Dl~G----~G~S~~~~~~~~~~~~~~~------- 91 (295)
+.|+..+++++.+|+||++||++++...|..+++.|.. ++.+++++.+. .+........ ..+..+
T Consensus 11 ~~~~~~~~~~~~~p~vv~lHG~g~~~~~~~~l~~~l~~-~~~~l~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~ 86 (209)
T d3b5ea1 11 FPYRLLGAGKESRECLFLLHGSGVDETTLVPLARRIAP-TATLVAARGRIPQEDGFRWFERIDP---TRFEQKSILAETA 86 (209)
T ss_dssp SCEEEESTTSSCCCEEEEECCTTBCTTTTHHHHHHHCT-TSEEEEECCSEEETTEEESSCEEET---TEECHHHHHHHHH
T ss_pred ceeEecCCCCCCCCEEEEEcCCCCCHHHHHHHHHHhcc-CcEEEeeccCcCcccCccccccCCc---cccchhhHHHHHH
Confidence 34455565556679999999999999999999999986 79999987641 1111111000 011122
Q ss_pred HHHHHHHHHHHHhCCC-CceEEEEecccch-HHHHHHHHhCcCccceeEEEcCCCCCCCCCchhhhhhhcccchhhhhhh
Q 022534 92 EFHEELDKLLDVLEVK-YPFFLVVQGFLVG-SYGLTWALKNPSRISKLAILNSPLTASSPLPGLFQQLRIPLLGEFTAQN 169 (295)
Q Consensus 92 ~~~~~l~~~~~~l~~~-~~~~lv~~G~~~G-~~~~~~a~~~p~~v~~lil~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (295)
.+.+.|..+.++.+++ +.++++ |+|.| .+++.++.++|++++++++++ |.....
T Consensus 87 ~l~~~l~~~~~~~~id~~ri~l~--G~S~Gg~~a~~~a~~~p~~~~~~v~~~-g~~~~~--------------------- 142 (209)
T d3b5ea1 87 AFAAFTNEAAKRHGLNLDHATFL--GYSNGANLVSSLMLLHPGIVRLAALLR-PMPVLD--------------------- 142 (209)
T ss_dssp HHHHHHHHHHHHHTCCGGGEEEE--EETHHHHHHHHHHHHSTTSCSEEEEES-CCCCCS---------------------
T ss_pred HHHHHHHHHHHHhCcccCCEEEE--eeCChHHHHHHHHHhCCCcceEEEEeC-Cccccc---------------------
Confidence 2333344455554443 235555 78776 567888999999999998874 321100
Q ss_pred HHHHHHHHHhCCCccccccccccccccccccCCchhHHHHHHHhcchhhhhHhhhcCcCCCCCCCcEEEEEeCCCCCCCc
Q 022534 170 AIMAERFIEAGSPYVLKLDKADVYRLPYLASSGPGFALLEAARKVNFKDISSRIGAGFSSGSWDKPVLVAWGISDKYLPQ 249 (295)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~~~ 249 (295)
..+ . ....++|+++++|++|++++.
T Consensus 143 ----------~~~--------------~-------------------------------~~~~~~p~~~~~G~~D~~~~~ 167 (209)
T d3b5ea1 143 ----------HVP--------------A-------------------------------TDLAGIRTLIIAGAADETYGP 167 (209)
T ss_dssp ----------SCC--------------C-------------------------------CCCTTCEEEEEEETTCTTTGG
T ss_pred ----------ccc--------------c-------------------------------cccccchheeeeccCCCccCH
Confidence 000 0 002258999999999999863
Q ss_pred chHHHHHh---cCCCCeEEEEecCCCCCCCCCChHHHHHHHHHHHHh
Q 022534 250 SVAEEFQK---GNPNVVKLQMIEGAGHMPQEDWPEKVVDGLRYFFLN 293 (295)
Q Consensus 250 ~~~~~~~~---~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 293 (295)
.+.++.+ ....++++.++++ ||... ++++ +.+++||.+
T Consensus 168 -~~~~~~~~l~~~G~~v~~~~~~g-gH~i~---~~~~-~~~~~wl~~ 208 (209)
T d3b5ea1 168 -FVPALVTLLSRHGAEVDARIIPS-GHDIG---DPDA-AIVRQWLAG 208 (209)
T ss_dssp -GHHHHHHHHHHTTCEEEEEEESC-CSCCC---HHHH-HHHHHHHHC
T ss_pred -HHHHHHHHHHHCCCCeEEEEECC-CCCCC---HHHH-HHHHHHhCC
Confidence 3333332 2333479999987 89763 4444 667899853
|
| >d1fj2a_ c.69.1.14 (A:) Acyl protein thioesterase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase/thioesterase 1 domain: Acyl protein thioesterase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.56 E-value=5.5e-14 Score=114.67 Aligned_cols=181 Identities=17% Similarity=0.206 Sum_probs=111.4
Q ss_pred CCceEEEEcCCCCCCccchhhHHHhhhCCCeEEEeCCCCCCCC-----------CCCCCCCCCCCCC---HHHHHHHHHH
Q 022534 34 RLGTIVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGFGFS-----------DKPEKGYDDFDFT---ENEFHEELDK 99 (295)
Q Consensus 34 ~~~~vv~lHG~~~~~~~w~~~~~~l~~~~~~via~Dl~G~G~S-----------~~~~~~~~~~~~~---~~~~~~~l~~ 99 (295)
.+++|||+||++++...|..++..|...++.++++|=|.+..+ +...... ..... ++...+.|..
T Consensus 20 ~~~~VI~lHG~G~~~~~~~~~~~~l~~~~~~~v~p~Ap~~~~~~~~~~~~~~w~~~~~~~~-~~~~~~~~i~~~~~~l~~ 98 (229)
T d1fj2a_ 20 ATAAVIFLHGLGDTGHGWAEAFAGIRSSHIKYICPHAPVRPVTLNMNVAMPSWFDIIGLSP-DSQEDESGIKQAAENIKA 98 (229)
T ss_dssp CSEEEEEECCSSSCHHHHHHHHHTTCCTTEEEEECCCCEEEEGGGTTEEEECSSCBCCCST-TCCBCHHHHHHHHHHHHH
T ss_pred CCCEEEEEcCCCCCHHHHHHHHHHhcCCCCEEEeCCCCCCccccCCCcccccccccccccc-cchhhhHHHHHHHHHHHH
Confidence 3568999999999999999888888767899999886532111 0000000 00111 2333444555
Q ss_pred HHHHh---CCC-CceEEEEecccch-HHHHHHHHhCcCccceeEEEcCCCCCCCCCchhhhhhhcccchhhhhhhHHHHH
Q 022534 100 LLDVL---EVK-YPFFLVVQGFLVG-SYGLTWALKNPSRISKLAILNSPLTASSPLPGLFQQLRIPLLGEFTAQNAIMAE 174 (295)
Q Consensus 100 ~~~~l---~~~-~~~~lv~~G~~~G-~~~~~~a~~~p~~v~~lil~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (295)
+++.. +++ ..++++ |+|.| .+++.+++++|+++++++.+++ +... . .
T Consensus 99 li~~~~~~~i~~~ri~l~--GfS~Gg~~a~~~~~~~~~~~~gvi~~sg-~lp~---~-----------~----------- 150 (229)
T d1fj2a_ 99 LIDQEVKNGIPSNRIILG--GFSQGGALSLYTALTTQQKLAGVTALSC-WLPL---R-----------A----------- 150 (229)
T ss_dssp HHHHHHHTTCCGGGEEEE--EETHHHHHHHHHHTTCSSCCSEEEEESC-CCTT---G-----------G-----------
T ss_pred HhhhhhhcCCCccceeee--ecccchHHHHHHHHhhccccCccccccc-cccc---c-----------c-----------
Confidence 55432 332 235554 78876 4677888999999999988753 1100 0 0
Q ss_pred HHHHhCCCccccccccccccccccccCCchhHHHHHHHhcchhhhhHhhhcCcCCCCCCCcEEEEEeCCCCCCCcchHHH
Q 022534 175 RFIEAGSPYVLKLDKADVYRLPYLASSGPGFALLEAARKVNFKDISSRIGAGFSSGSWDKPVLVAWGISDKYLPQSVAEE 254 (295)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~~~~~~~~ 254 (295)
. .+ ... . .. ..-++|++++||++|.++|.+.+++
T Consensus 151 ----~-~~-------~~~----~-------------------~~-----------~~~~~Pvli~hG~~D~~vp~~~~~~ 184 (229)
T d1fj2a_ 151 ----S-FP-------QGP----I-------------------GG-----------ANRDISILQCHGDCDPLVPLMFGSL 184 (229)
T ss_dssp ----G-SC-------SSC----C-------------------CS-----------TTTTCCEEEEEETTCSSSCHHHHHH
T ss_pred ----c-cc-------ccc----c-------------------cc-----------ccccCceeEEEcCCCCeeCHHHHHH
Confidence 0 00 000 0 00 0125899999999999999887765
Q ss_pred HHhcC-----CCCeEEEEecCCCCCCCCCChHHHHHHHHHHHHh
Q 022534 255 FQKGN-----PNVVKLQMIEGAGHMPQEDWPEKVVDGLRYFFLN 293 (295)
Q Consensus 255 ~~~~~-----~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 293 (295)
..+.+ +.++++++++++||... ++ ..+.+.+||.+
T Consensus 185 ~~~~L~~~~~~~~v~~~~~~g~gH~i~---~~-~~~~~~~wL~~ 224 (229)
T d1fj2a_ 185 TVEKLKTLVNPANVTFKTYEGMMHSSC---QQ-EMMDVKQFIDK 224 (229)
T ss_dssp HHHHHHHHSCGGGEEEEEETTCCSSCC---HH-HHHHHHHHHHH
T ss_pred HHHHHHhcCCCCceEEEEeCCCCCccC---HH-HHHHHHHHHHh
Confidence 44322 23478999999999753 33 35678889976
|
| >d2bgra2 c.69.1.24 (A:509-766) Dipeptidyl peptidase IV/CD26, C-terminal domain {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: DPP6 catalytic domain-like domain: Dipeptidyl peptidase IV/CD26, C-terminal domain species: Pig (Sus scrofa) [TaxId: 9823]
Probab=99.53 E-value=4.1e-13 Score=111.05 Aligned_cols=229 Identities=12% Similarity=0.095 Sum_probs=125.2
Q ss_pred eeeEEeCcEEEEEEEcCCCC---CCC-ceEEEEcCCCCC---C--ccchhhHHHhhhCCCeEEEeCCCCCCCCCCCCCCC
Q 022534 13 GSYIKSGEYRWFVRETGSAD---SRL-GTIVFLHGAPSH---S--YSYRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGY 83 (295)
Q Consensus 13 ~~~~~~~~~~~~~~~~g~~~---~~~-~~vv~lHG~~~~---~--~~w~~~~~~l~~~~~~via~Dl~G~G~S~~~~~~~ 83 (295)
=.|+..||.+++|.-.-+++ .++ |.||++||++.. . .........++.+||-|+.+|.||+|.+.......
T Consensus 6 ~~~~~~~~~~~~~~l~lP~~~~~~kk~P~iv~~HGGp~~~~~~~~~~~~~~~~~~a~~g~~V~~~d~rg~~~~~~~~~~~ 85 (258)
T d2bgra2 6 LDFIILNETKFWYQMILPPHFDKSKKYPLLLDVYAGPCSQKADTVFRLNWATYLASTENIIVASFDGRGSGYQGDKIMHA 85 (258)
T ss_dssp EEEEEETTEEEEEEEEECTTCCTTSCEEEEEECCCCTTCCCCCCCCCCSHHHHHHHTTCCEEEEECCTTCSSSCHHHHGG
T ss_pred EEEEEeCCcEEEEEEEECCCcCCCCCeeEEEEEcCCCCcccCCCccCcCHHHHHHhcCCcEEEeecccccCCcchHHHHh
Confidence 35778899999998875542 223 789999995221 2 22233444566779999999999988654210000
Q ss_pred CCCCCCHHHHHHHHHHHHHHhC----CC-CceEEEEecccchH-HHHHHHHhCcCccceeEEEcCCCCCCCCCchhhhhh
Q 022534 84 DDFDFTENEFHEELDKLLDVLE----VK-YPFFLVVQGFLVGS-YGLTWALKNPSRISKLAILNSPLTASSPLPGLFQQL 157 (295)
Q Consensus 84 ~~~~~~~~~~~~~l~~~~~~l~----~~-~~~~lv~~G~~~G~-~~~~~a~~~p~~v~~lil~~~p~~~~~~~~~~~~~~ 157 (295)
....+...+ ..++.++++.+. ++ +.+.+ .|+|.|+ .++..+..+|+.+...+.. ++.... ....
T Consensus 86 ~~~~~~~~~-~~~~~~~~~~~~~~~~id~~~i~i--~G~S~GG~~~~~~~~~~~~~~~~~~~~-~~~~~~----~~~~-- 155 (258)
T d2bgra2 86 INRRLGTFE-VEDQIEAARQFSKMGFVDNKRIAI--WGWSYGGYVTSMVLGSGSGVFKCGIAV-APVSRW----EYYD-- 155 (258)
T ss_dssp GTTCTTSHH-HHHHHHHHHHHTTSSSEEEEEEEE--EEETHHHHHHHHHHTTTCSCCSEEEEE-SCCCCG----GGSB--
T ss_pred hhhhhhhHH-HHHHHHHHHHhhhhcccccccccc--cCcchhhcccccccccCCCcceEEEEe-eccccc----cccc--
Confidence 000111122 233334444332 12 12333 3777664 4666777889877655544 222111 0000
Q ss_pred hcccchhhhhhhHHHHHHHHHhCCCccccccccccccccccccCCchhHHHHHHHhcchhhhhHhhhcCcCCCCCCCcEE
Q 022534 158 RIPLLGEFTAQNAIMAERFIEAGSPYVLKLDKADVYRLPYLASSGPGFALLEAARKVNFKDISSRIGAGFSSGSWDKPVL 237 (295)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l 237 (295)
........ +.+... . . .+.....+......++ -++|+|
T Consensus 156 ------------~~~~~~~~--~~~~~~--~-------------~-----~~~~~~~~~~~~~~~~--------~~~P~l 193 (258)
T d2bgra2 156 ------------SVYTERYM--GLPTPE--D-------------N-----LDHYRNSTVMSRAENF--------KQVEYL 193 (258)
T ss_dssp ------------HHHHHHHH--CCCSTT--T-------------T-----HHHHHHSCSGGGGGGG--------GGSEEE
T ss_pred ------------ccccchhc--ccccch--h-------------h-----HHHhhccccccccccc--------ccCChh
Confidence 00001111 100000 0 0 0001111111111111 148999
Q ss_pred EEEeCCCCCCCcchHHHHHhcC---CCCeEEEEecCCCCCCC-CCChHHHHHHHHHHHHh
Q 022534 238 VAWGISDKYLPQSVAEEFQKGN---PNVVKLQMIEGAGHMPQ-EDWPEKVVDGLRYFFLN 293 (295)
Q Consensus 238 ~i~G~~D~~~~~~~~~~~~~~~---~~~~~~~~i~~~gH~~~-~e~p~~~~~~i~~fl~~ 293 (295)
+++|++|..+|++.+.++.+.+ ...++++++|+++|... .+....+.+.+.+||++
T Consensus 194 i~hG~~D~~Vp~~~s~~~~~~l~~~g~~~~~~~~~g~~H~~~~~~~~~~~~~~i~~fl~~ 253 (258)
T d2bgra2 194 LIHGTADDNVHFQQSAQISKALVDVGVDFQAMWYTDEDHGIASSTAHQHIYTHMSHFIKQ 253 (258)
T ss_dssp EEEETTCSSSCTHHHHHHHHHHHHHTCCCEEEEETTCCTTCCSHHHHHHHHHHHHHHHHH
T ss_pred eeeecCCCcccHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCccHHHHHHHHHHHHHH
Confidence 9999999999998888876432 23479999999999753 45577889999999976
|
| >d1ex9a_ c.69.1.18 (A:) Lipase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Bacterial lipase domain: Lipase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.52 E-value=1.5e-14 Score=121.93 Aligned_cols=98 Identities=14% Similarity=0.182 Sum_probs=80.2
Q ss_pred CceEEEEcCCCCCCcc-----chhhHHHhhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCc
Q 022534 35 LGTIVFLHGAPSHSYS-----YRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEELDKLLDVLEVKYP 109 (295)
Q Consensus 35 ~~~vv~lHG~~~~~~~-----w~~~~~~l~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~ 109 (295)
+-||||+||++++... |..+.+.|.+.||+|+++|++|+|.++. +.+++.++|.++++..+.++
T Consensus 7 ~~PvvlvHG~~g~~~~~~~~yw~~i~~~L~~~G~~v~~~~~~~~~~~~~----------~a~~l~~~i~~~~~~~g~~~- 75 (285)
T d1ex9a_ 7 KYPIVLAHGMLGFDNILGVDYWFGIPSALRRDGAQVYVTEVSQLDTSEV----------RGEQLLQQVEEIVALSGQPK- 75 (285)
T ss_dssp SSCEEEECCTTCCSEETTEESSTTHHHHHHHTTCCEEEECCCSSSCHHH----------HHHHHHHHHHHHHHHHCCSC-
T ss_pred CCCEEEECCCCCCccccchhhHHHHHHHHHhCCCEEEEeCCCCCCCcHH----------HHHHHHHHHHHHHHHcCCCe-
Confidence 3479999999876544 8889999999899999999999986542 34678899999999999875
Q ss_pred eEEEEecccchHH-HHHHHHhCcCccceeEEEcCCCC
Q 022534 110 FFLVVQGFLVGSY-GLTWALKNPSRISKLAILNSPLT 145 (295)
Q Consensus 110 ~~lv~~G~~~G~~-~~~~a~~~p~~v~~lil~~~p~~ 145 (295)
+++| |||+|++ +..++..+|++|+++|.+++|..
T Consensus 76 v~li--gHS~GG~~~r~~~~~~p~~v~~lv~i~tPh~ 110 (285)
T d1ex9a_ 76 VNLI--GHSHGGPTIRYVAAVRPDLIASATSVGAPHK 110 (285)
T ss_dssp EEEE--EETTHHHHHHHHHHHCGGGEEEEEEESCCTT
T ss_pred EEEE--EECccHHHHHHHHHHCCccceeEEEECCCCC
Confidence 6777 7788764 55677899999999999988754
|
| >d2h1ia1 c.69.1.14 (A:1-202) Carboxylesterase {Bacillus cereus [TaxId: 1396]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase/thioesterase 1 domain: Carboxylesterase species: Bacillus cereus [TaxId: 1396]
Probab=99.50 E-value=5.8e-13 Score=105.97 Aligned_cols=177 Identities=12% Similarity=0.126 Sum_probs=112.6
Q ss_pred CCCceEEEEcCCCCCCccchhhHHHhhhCCCeEEEeCCCCCCCCCCCCCC-CCCCCCCHHH-------HHHHHHHHHHHh
Q 022534 33 SRLGTIVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKG-YDDFDFTENE-------FHEELDKLLDVL 104 (295)
Q Consensus 33 ~~~~~vv~lHG~~~~~~~w~~~~~~l~~~~~~via~Dl~G~G~S~~~~~~-~~~~~~~~~~-------~~~~l~~~~~~l 104 (295)
+++|+||++||++++...|..+++.+++ ++.|++++-+-.+........ ........++ +...+..+.++.
T Consensus 12 ~~~P~vi~lHG~g~~~~~~~~~~~~l~~-~~~vv~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 90 (202)
T d2h1ia1 12 TSKPVLLLLHGTGGNELDLLPLAEIVDS-EASVLSVRGNVLENGMPRFFRRLAEGIFDEEDLIFRTKELNEFLDEAAKEY 90 (202)
T ss_dssp TTSCEEEEECCTTCCTTTTHHHHHHHHT-TSCEEEECCSEEETTEEESSCEEETTEECHHHHHHHHHHHHHHHHHHHHHT
T ss_pred CCCCEEEEECCCCCCHHHHHHHHHHhcc-CCceeeecccccCCCCccccccCCCCCCchHHHHHHHHHHHHHHHHHHHhc
Confidence 3468999999999999999999999985 899999986544433211000 0000112222 333333444444
Q ss_pred CCC-CceEEEEecccch-HHHHHHHHhCcCccceeEEEcCCCCCCCCCchhhhhhhcccchhhhhhhHHHHHHHHHhCCC
Q 022534 105 EVK-YPFFLVVQGFLVG-SYGLTWALKNPSRISKLAILNSPLTASSPLPGLFQQLRIPLLGEFTAQNAIMAERFIEAGSP 182 (295)
Q Consensus 105 ~~~-~~~~lv~~G~~~G-~~~~~~a~~~p~~v~~lil~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (295)
+++ ..+.++ |+|.| .+++.+++++|+++.+++.++ +...... ..
T Consensus 91 ~~d~~~i~~~--G~S~Gg~~a~~la~~~~~~~~~~~~~~-~~~~~~~-------------------------------~~ 136 (202)
T d2h1ia1 91 KFDRNNIVAI--GYSNGANIAASLLFHYENALKGAVLHH-PMVPRRG-------------------------------MQ 136 (202)
T ss_dssp TCCTTCEEEE--EETHHHHHHHHHHHHCTTSCSEEEEES-CCCSCSS-------------------------------CC
T ss_pred cccccceeee--cccccchHHHHHHHhccccccceeeec-CCCCccc-------------------------------cc
Confidence 543 234444 77765 567888999999999888764 2211000 00
Q ss_pred ccccccccccccccccccCCchhHHHHHHHhcchhhhhHhhhcCcCCCCCCCcEEEEEeCCCCCCCcchHHHHHhcC---
Q 022534 183 YVLKLDKADVYRLPYLASSGPGFALLEAARKVNFKDISSRIGAGFSSGSWDKPVLVAWGISDKYLPQSVAEEFQKGN--- 259 (295)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~--- 259 (295)
. . .....|+++++|++|+++|++.++++++.+
T Consensus 137 --------------~-------------------~------------~~~~~~~~i~~G~~D~~vp~~~~~~~~~~l~~~ 171 (202)
T d2h1ia1 137 --------------L-------------------A------------NLAGKSVFIAAGTNDPICSSAESEELKVLLENA 171 (202)
T ss_dssp --------------C-------------------C------------CCTTCEEEEEEESSCSSSCHHHHHHHHHHHHTT
T ss_pred --------------c-------------------c------------ccccchhhcccccCCCccCHHHHHHHHHHHHHC
Confidence 0 0 022588999999999999988877766443
Q ss_pred CCCeEEEEecCCCCCCCCCChHHHHHHHHHHHHhc
Q 022534 260 PNVVKLQMIEGAGHMPQEDWPEKVVDGLRYFFLNY 294 (295)
Q Consensus 260 ~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~ 294 (295)
..+++++.+|+ ||.. +.+-.+.+.+||.+.
T Consensus 172 g~~~~~~~~~g-gH~~----~~~~~~~~~~wl~k~ 201 (202)
T d2h1ia1 172 NANVTMHWENR-GHQL----TMGEVEKAKEWYDKA 201 (202)
T ss_dssp TCEEEEEEESS-TTSC----CHHHHHHHHHHHHHH
T ss_pred CCCEEEEEECC-CCcC----CHHHHHHHHHHHHHh
Confidence 22478899985 8965 344567889998763
|
| >d2r8ba1 c.69.1.14 (A:44-246) Uncharacterized protein Atu2452 {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase/thioesterase 1 domain: Uncharacterized protein Atu2452 species: Agrobacterium tumefaciens [TaxId: 358]
Probab=99.50 E-value=2.7e-13 Score=108.13 Aligned_cols=176 Identities=13% Similarity=0.164 Sum_probs=114.5
Q ss_pred CCCceEEEEcCCCCCCccchhhHHHhhhCCCeEEEeCCCCCCCCCCCCC-CCCCCCCCHHHH---HHHHHHHHH----Hh
Q 022534 33 SRLGTIVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGFGFSDKPEK-GYDDFDFTENEF---HEELDKLLD----VL 104 (295)
Q Consensus 33 ~~~~~vv~lHG~~~~~~~w~~~~~~l~~~~~~via~Dl~G~G~S~~~~~-~~~~~~~~~~~~---~~~l~~~~~----~l 104 (295)
+.+|+||++||++++...|..+++.|.+ ++.|++++.+..+.+..... .........++. ...+.++++ ..
T Consensus 15 ~~~P~vi~lHG~G~~~~~~~~~~~~l~~-~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 93 (203)
T d2r8ba1 15 AGAPLFVLLHGTGGDENQFFDFGARLLP-QATILSPVGDVSEHGAARFFRRTGEGVYDMVDLERATGKMADFIKANREHY 93 (203)
T ss_dssp TTSCEEEEECCTTCCHHHHHHHHHHHST-TSEEEEECCSEEETTEEESSCBCGGGCBCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCCCHHHHHHHHHHhcc-CCeEEEeccccccccccccccccCccccchhHHHHHHHHHHHHHHHhhhcC
Confidence 3468999999999999999999999986 79999998876655532110 000111122232 333444443 34
Q ss_pred CCCCceEEEEecccch-HHHHHHHHhCcCccceeEEEcCCCCCCCCCchhhhhhhcccchhhhhhhHHHHHHHHHhCCCc
Q 022534 105 EVKYPFFLVVQGFLVG-SYGLTWALKNPSRISKLAILNSPLTASSPLPGLFQQLRIPLLGEFTAQNAIMAERFIEAGSPY 183 (295)
Q Consensus 105 ~~~~~~~lv~~G~~~G-~~~~~~a~~~p~~v~~lil~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (295)
+.++ ++++ |+|.| .++..++.++|+.+..++.+++ .... . . .
T Consensus 94 ~~~~-v~l~--G~S~Gg~~a~~~a~~~p~~~~~~~~~~~-~~~~---~---------------------------~--~- 136 (203)
T d2r8ba1 94 QAGP-VIGL--GFSNGANILANVLIEQPELFDAAVLMHP-LIPF---E---------------------------P--K- 136 (203)
T ss_dssp TCCS-EEEE--EETHHHHHHHHHHHHSTTTCSEEEEESC-CCCS---C---------------------------C--C-
T ss_pred CCce-EEEE--EecCHHHHHHHHHHhhhhcccceeeecc-cccc---c---------------------------c--c-
Confidence 4444 5555 77766 5678888999999998887753 1100 0 0 0
Q ss_pred cccccccccccccccccCCchhHHHHHHHhcchhhhhHhhhcCcCCCCCCCcEEEEEeCCCCCCCcchHHHHHhcCC---
Q 022534 184 VLKLDKADVYRLPYLASSGPGFALLEAARKVNFKDISSRIGAGFSSGSWDKPVLVAWGISDKYLPQSVAEEFQKGNP--- 260 (295)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~~--- 260 (295)
. . ......|+++++|++|+++|++.++++.+.+.
T Consensus 137 -------------~-------------------~-----------~~~~~~~~~i~hG~~D~~vp~~~~~~~~~~L~~~g 173 (203)
T d2r8ba1 137 -------------I-------------------S-----------PAKPTRRVLITAGERDPICPVQLTKALEESLKAQG 173 (203)
T ss_dssp -------------C-------------------C-----------CCCTTCEEEEEEETTCTTSCHHHHHHHHHHHHHHS
T ss_pred -------------c-------------------c-----------cccccchhhccccCCCCcccHHHHHHHHHHHHHCC
Confidence 0 0 00225799999999999999988877765432
Q ss_pred CCeEEEEecCCCCCCCCCChHHHHHHHHHHHHhc
Q 022534 261 NVVKLQMIEGAGHMPQEDWPEKVVDGLRYFFLNY 294 (295)
Q Consensus 261 ~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~ 294 (295)
-.++++++++ ||... ++ ..+.+++||..+
T Consensus 174 ~~v~~~~~~g-gH~~~---~~-~~~~~~~wl~~~ 202 (203)
T d2r8ba1 174 GTVETVWHPG-GHEIR---SG-EIDAVRGFLAAY 202 (203)
T ss_dssp SEEEEEEESS-CSSCC---HH-HHHHHHHHHGGG
T ss_pred CCEEEEEECC-CCcCC---HH-HHHHHHHHHHhc
Confidence 2368999986 89853 34 457789999764
|
| >d1dina_ c.69.1.9 (A:) Dienelactone hydrolase {Pseudomonas sp., B13 [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Dienelactone hydrolase domain: Dienelactone hydrolase species: Pseudomonas sp., B13 [TaxId: 306]
Probab=99.44 E-value=2.3e-12 Score=105.12 Aligned_cols=197 Identities=15% Similarity=0.156 Sum_probs=112.8
Q ss_pred EeCcEEEEEEEcCCCCCCCceEEEEcCCCCCCccchhhHHHhhhCCCeEEEeCCCCCCCCCCCCCCCCCC----------
Q 022534 17 KSGEYRWFVRETGSADSRLGTIVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDF---------- 86 (295)
Q Consensus 17 ~~~~~~~~~~~~g~~~~~~~~vv~lHG~~~~~~~w~~~~~~l~~~~~~via~Dl~G~G~S~~~~~~~~~~---------- 86 (295)
+.+|..++.-..-+.+.+.|.||++||..+.......++..|+++||.|+++|+.|.+.........+..
T Consensus 10 ~~dg~~~~a~~~~P~~~~~P~vl~~h~~~G~~~~~~~~a~~lA~~Gy~vl~pd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (233)
T d1dina_ 10 SYDGHTFGALVGSPAKAPAPVIVIAQEIFGVNAFMRETVSWLVDQGYAAVCPDLYARQAPGTALDPQDERQREQAYKLWQ 89 (233)
T ss_dssp CTTSCEECEEEECCSSSSEEEEEEECCTTBSCHHHHHHHHHHHHTTCEEEEECGGGGTSTTCBCCTTSHHHHHHHHHHHH
T ss_pred cCCCCEEEEEEECCCCCCceEEEEeCCCCCCCHHHHHHHHHHHhcCCcceeeeeccCCCcCcccChHHHHHHHHHHHHhh
Confidence 3356556554444444457899999977665555567788899899999999998766554321111000
Q ss_pred CCCHHHHHHHHHHHHHHhC----CCCceEEEEecccchH-HHHHHHHhCcCccceeEEEcCCCCCCCCCchhhhhhhccc
Q 022534 87 DFTENEFHEELDKLLDVLE----VKYPFFLVVQGFLVGS-YGLTWALKNPSRISKLAILNSPLTASSPLPGLFQQLRIPL 161 (295)
Q Consensus 87 ~~~~~~~~~~l~~~~~~l~----~~~~~~lv~~G~~~G~-~~~~~a~~~p~~v~~lil~~~p~~~~~~~~~~~~~~~~~~ 161 (295)
....+....|+...++.+. .++++.++ |+|.|+ ++...+.+ +. +.+.+.+. +.. .
T Consensus 90 ~~~~~~~~~d~~aa~~~l~~~~~~~~~i~~~--G~s~Gg~~a~~~a~~-~~-~~~~~~~~-~~~-------~-------- 149 (233)
T d1dina_ 90 AFDMEAGVGDLEAAIRYARHQPYSNGKVGLV--GYCLGGALAFLVAAK-GY-VDRAVGYY-GVG-------L-------- 149 (233)
T ss_dssp TCCHHHHHHHHHHHHHHHHTSTTEEEEEEEE--EETHHHHHHHHHHHH-TC-SSEEEEES-CSC-------G--------
T ss_pred hhhhHHHHHHHHHHHHHHHhCCCCCCceEEE--Eecccccceeecccc-cc-cceecccc-ccc-------c--------
Confidence 0122233455555555442 12234444 676654 44444433 32 33333221 000 0
Q ss_pred chhhhhhhHHHHHHHHHhCCCccccccccccccccccccCCchhHHHHHHHhcchhhhhHhhhcCcCCCCCCCcEEEEEe
Q 022534 162 LGEFTAQNAIMAERFIEAGSPYVLKLDKADVYRLPYLASSGPGFALLEAARKVNFKDISSRIGAGFSSGSWDKPVLVAWG 241 (295)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G 241 (295)
. ...... .++++|+|+++|
T Consensus 150 ------~-------------------------------------------------~~~~~~------~~i~~Pvl~~~G 168 (233)
T d1dina_ 150 ------E-------------------------------------------------KQLNKV------PEVKHPALFHMG 168 (233)
T ss_dssp ------G-------------------------------------------------GGGGGG------GGCCSCEEEEEE
T ss_pred ------c-------------------------------------------------cchhhh------hccCCcceeeec
Confidence 0 000000 135799999999
Q ss_pred CCCCCCCcchHHHHHhcC--CCCeEEEEecCCCCCCCCCCh--------HHHHHHHHHHHHhc
Q 022534 242 ISDKYLPQSVAEEFQKGN--PNVVKLQMIEGAGHMPQEDWP--------EKVVDGLRYFFLNY 294 (295)
Q Consensus 242 ~~D~~~~~~~~~~~~~~~--~~~~~~~~i~~~gH~~~~e~p--------~~~~~~i~~fl~~~ 294 (295)
++|+.+|.+..+.+.+.. ...++++++||++|..+.+.. ++..+.+.+||..+
T Consensus 169 ~~D~~vp~e~~~~~~~~~~~~~~~~~~~y~ga~HgF~~~~~~~y~~~aa~~a~~r~~~ffa~~ 231 (233)
T d1dina_ 169 GQDHFVPAPSRQLITEGFGANPLLQVHWYEEAGHSFARTSSSGYVASAAALANERTLDFLAPL 231 (233)
T ss_dssp TTCTTSCHHHHHHHHHHHTTCTTEEEEEETTCCTTTTCTTSTTCCHHHHHHHHHHHHHHHGGG
T ss_pred ccccCCCHHHHHHHHHHHhcCCCEEEEEECCCCcCCCCCCCccCCHHHHHHHHHHHHHHHHcC
Confidence 999999988877765432 234799999999997654332 23356666787654
|
| >d1xfda2 c.69.1.24 (A:592-849) Dipeptidyl aminopeptidase-like protein 6, DPP6, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: DPP6 catalytic domain-like domain: Dipeptidyl aminopeptidase-like protein 6, DPP6, C-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.44 E-value=2.2e-13 Score=112.76 Aligned_cols=62 Identities=13% Similarity=0.203 Sum_probs=49.0
Q ss_pred CCcEEEEEeCCCCCCCcchHHHHHhc---CCCCeEEEEecCCCCCCCC-CChHHHHHHHHHHHHhc
Q 022534 233 DKPVLVAWGISDKYLPQSVAEEFQKG---NPNVVKLQMIEGAGHMPQE-DWPEKVVDGLRYFFLNY 294 (295)
Q Consensus 233 ~~P~l~i~G~~D~~~~~~~~~~~~~~---~~~~~~~~~i~~~gH~~~~-e~p~~~~~~i~~fl~~~ 294 (295)
++|+|+++|++|..++++.+.++.+. .....+++++|+++|.... +....+.+.+.+||+++
T Consensus 190 ~~p~Li~hG~~D~~vp~~~s~~~~~~l~~~~~~~~~~~~p~~~H~~~~~~~~~~~~~~~~~f~~~~ 255 (258)
T d1xfda2 190 EQQFLIIHPTADEKIHFQHTAELITQLIRGKANYSLQIYPDESHYFTSSSLKQHLYRSIINFFVEC 255 (258)
T ss_dssp SCEEEEEEETTCSSSCHHHHHHHHHHHHHTTCCCEEEEETTCCSSCCCHHHHHHHHHHHHHHHTTT
T ss_pred cccccccccCCCCCcCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCcCHHHHHHHHHHHHHHh
Confidence 68999999999999998887776543 2234689999999997643 45667889999999863
|
| >d1tcaa_ c.69.1.17 (A:) Triacylglycerol lipase {Yeast (Candida antarctica), form b [TaxId: 34362]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Triacylglycerol lipase species: Yeast (Candida antarctica), form b [TaxId: 34362]
Probab=99.35 E-value=1.3e-12 Score=110.96 Aligned_cols=101 Identities=11% Similarity=0.049 Sum_probs=77.2
Q ss_pred CCceEEEEcCCCCCCcc--chhhHHHhhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCceE
Q 022534 34 RLGTIVFLHGAPSHSYS--YRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEELDKLLDVLEVKYPFF 111 (295)
Q Consensus 34 ~~~~vv~lHG~~~~~~~--w~~~~~~l~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~~ 111 (295)
.+.||||+||++++... |..+++.|++.||+|+.+|+||+|.++... +.++++..|..+++..+.++ +.
T Consensus 30 ~~~PVvlvHG~~~~~~~~~~~~~~~~L~~~Gy~v~~~d~~g~g~~d~~~--------sae~la~~i~~v~~~~g~~k-V~ 100 (317)
T d1tcaa_ 30 VSKPILLVPGTGTTGPQSFDSNWIPLSTQLGYTPCWISPPPFMLNDTQV--------NTEYMVNAITALYAGSGNNK-LP 100 (317)
T ss_dssp CSSEEEEECCTTCCHHHHHTTTHHHHHHTTTCEEEEECCTTTTCSCHHH--------HHHHHHHHHHHHHHHTTSCC-EE
T ss_pred CCCcEEEECCCCCCCcchhHHHHHHHHHhCCCeEEEecCCCCCCCchHh--------HHHHHHHHHHHHHHhccCCc-eE
Confidence 35689999999887655 677899999889999999999999887421 34567778888888877665 77
Q ss_pred EEEecccchHHHH-HHHHhCc---CccceeEEEcCCCC
Q 022534 112 LVVQGFLVGSYGL-TWALKNP---SRISKLAILNSPLT 145 (295)
Q Consensus 112 lv~~G~~~G~~~~-~~a~~~p---~~v~~lil~~~p~~ 145 (295)
+| |||+|++.. .++..+| ++|+++|.+++|..
T Consensus 101 lV--GhS~GG~~a~~~l~~~p~~~~~V~~~v~i~~~~~ 136 (317)
T d1tcaa_ 101 VL--TWSQGGLVAQWGLTFFPSIRSKVDRLMAFAPDYK 136 (317)
T ss_dssp EE--EETHHHHHHHHHHHHCGGGTTTEEEEEEESCCTT
T ss_pred EE--EeCchHHHHHHHHHHCCCcchheeEEEEeCCCCC
Confidence 77 788876544 4445677 46999998877653
|
| >d1vkha_ c.69.1.32 (A:) Putative serine hydrolase Ydr428c {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Putative serine hydrolase Ydr428c domain: Putative serine hydrolase Ydr428c species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.32 E-value=1.7e-12 Score=107.25 Aligned_cols=98 Identities=9% Similarity=0.136 Sum_probs=61.8
Q ss_pred EEEEEcCCCCCCCceEEEEcCCC-----CCCccchhhH----HHhhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCCHHHH
Q 022534 23 WFVRETGSADSRLGTIVFLHGAP-----SHSYSYRNVM----SQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEF 93 (295)
Q Consensus 23 ~~~~~~g~~~~~~~~vv~lHG~~-----~~~~~w~~~~----~~l~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~ 93 (295)
+.+++.+. +.+|+||++||++ .+...|..+. ..+.+.||.|+++|.|+.+.... ...+++.
T Consensus 21 ~~~~~~~~--~~~~~vv~iHGGg~~~~~~~~~~~~~~~~~l~~~~~~~g~~v~~~dYrl~p~~~~--------~~~~~d~ 90 (263)
T d1vkha_ 21 LTFQEISQ--NTREAVIYIHGGAWNDPENTPNDFNQLANTIKSMDTESTVCQYSIEYRLSPEITN--------PRNLYDA 90 (263)
T ss_dssp EEEECCCT--TCCEEEEEECCSTTTCTTCCGGGGHHHHHHHHHHCTTCCEEEEEECCCCTTTSCT--------THHHHHH
T ss_pred EEeccCCC--CCCcEEEEECCCCccCCCCCcchHHHHHHHHHHHHHhCCeEEEEeccccCcchhh--------hHHHHhh
Confidence 34444332 3468999999953 2344555444 44456799999999996654321 1235677
Q ss_pred HHHHHHHHHHhCCCCceEEEEecccch-HHHHHHHHhCcCc
Q 022534 94 HEELDKLLDVLEVKYPFFLVVQGFLVG-SYGLTWALKNPSR 133 (295)
Q Consensus 94 ~~~l~~~~~~l~~~~~~~lv~~G~~~G-~~~~~~a~~~p~~ 133 (295)
...+..+.+..+.++ ++++ |+|+| .+++.++...++.
T Consensus 91 ~~~~~~l~~~~~~~~-i~l~--G~S~Gg~lal~~a~~~~~~ 128 (263)
T d1vkha_ 91 VSNITRLVKEKGLTN-INMV--GHSVGATFIWQILAALKDP 128 (263)
T ss_dssp HHHHHHHHHHHTCCC-EEEE--EETHHHHHHHHHHTGGGSC
T ss_pred hhhhhcccccccccc-eeee--ccCcHHHHHHHHHHhccCc
Confidence 777777777776664 6666 66665 5677777666554
|
| >d1auoa_ c.69.1.14 (A:) Carboxylesterase {Pseudomonas fluorescens [TaxId: 294]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase/thioesterase 1 domain: Carboxylesterase species: Pseudomonas fluorescens [TaxId: 294]
Probab=99.22 E-value=4.1e-10 Score=90.40 Aligned_cols=56 Identities=14% Similarity=0.162 Sum_probs=42.5
Q ss_pred CCcEEEEEeCCCCCCCcchHHHHHhc---CCCCeEEEEecCCCCCCCCCChHHHHHHHHHHHHh
Q 022534 233 DKPVLVAWGISDKYLPQSVAEEFQKG---NPNVVKLQMIEGAGHMPQEDWPEKVVDGLRYFFLN 293 (295)
Q Consensus 233 ~~P~l~i~G~~D~~~~~~~~~~~~~~---~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 293 (295)
+.|++++||++|+++|.+.+.++++. ...+++++.++ +||... ++..+.+.+||..
T Consensus 157 ~~pvl~~hG~~D~vvp~~~~~~~~~~L~~~g~~~~~~~~~-~gH~i~----~~~~~~i~~wl~~ 215 (218)
T d1auoa_ 157 RIPALCLHGQYDDVVQNAMGRSAFEHLKSRGVTVTWQEYP-MGHEVL----PQEIHDIGAWLAA 215 (218)
T ss_dssp TCCEEEEEETTCSSSCHHHHHHHHHHHHTTTCCEEEEEES-CSSSCC----HHHHHHHHHHHHH
T ss_pred CCCEEEEecCCCCccCHHHHHHHHHHHHHCCCCEEEEEEC-CCCccC----HHHHHHHHHHHHH
Confidence 58999999999999998877666543 33357999996 799653 3345779999865
|
| >d2pbla1 c.69.1.2 (A:1-261) Uncharacterized protein TM1040_2492 {Silicibacter sp. tm1040 [TaxId: 292414]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Uncharacterized protein TM1040 2492 species: Silicibacter sp. tm1040 [TaxId: 292414]
Probab=99.15 E-value=2.8e-10 Score=94.09 Aligned_cols=177 Identities=13% Similarity=0.090 Sum_probs=98.7
Q ss_pred CCCceEEEEcCCC---CCCccchhhHHHhhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCc
Q 022534 33 SRLGTIVFLHGAP---SHSYSYRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEELDKLLDVLEVKYP 109 (295)
Q Consensus 33 ~~~~~vv~lHG~~---~~~~~w~~~~~~l~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~ 109 (295)
.+.|+|||+||++ ++...|..++..|+++||.|+.+|.|..+....+ ...++..+.+..+.+.. +..
T Consensus 60 ~~~P~vv~iHGG~w~~g~~~~~~~~a~~l~~~G~~Vv~~~YRl~p~~~~p--------~~~~d~~~a~~~~~~~~--~~r 129 (261)
T d2pbla1 60 TPVGLFVFVHGGYWMAFDKSSWSHLAVGALSKGWAVAMPSYELCPEVRIS--------EITQQISQAVTAAAKEI--DGP 129 (261)
T ss_dssp SCSEEEEEECCSTTTSCCGGGCGGGGHHHHHTTEEEEEECCCCTTTSCHH--------HHHHHHHHHHHHHHHHS--CSC
T ss_pred CCCCeEEEECCCCCccCChhHhhhHHHHHhcCCceeecccccccccccCc--------hhHHHHHHHHHHHHhcc--cCc
Confidence 4568999999953 5666788889999989999999999965433211 01233334444443333 344
Q ss_pred eEEEEecccchH-HHHHHHHhC------cCccceeEEEcCCCCCCCCCchhhhhhhcccchhhhhhhHHHHHHHHHhCCC
Q 022534 110 FFLVVQGFLVGS-YGLTWALKN------PSRISKLAILNSPLTASSPLPGLFQQLRIPLLGEFTAQNAIMAERFIEAGSP 182 (295)
Q Consensus 110 ~~lv~~G~~~G~-~~~~~a~~~------p~~v~~lil~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (295)
+.++ |||.|+ +++.++... ...+++++.++.+.... .... ... ..+.. .
T Consensus 130 I~l~--G~SaGG~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~----~~~-----------~~~~~-~-- 185 (261)
T d2pbla1 130 IVLA--GHSAGGHLVARMLDPEVLPEAVGARIRNVVPISPLSDLR----PLLR----TSM-----------NEKFK-M-- 185 (261)
T ss_dssp EEEE--EETHHHHHHHHTTCTTTSCHHHHTTEEEEEEESCCCCCG----GGGG----STT-----------HHHHC-C--
T ss_pred eEEE--EcchHHHHHHHHhcCcccccchhhchhhhhccccccccc----hhhh----hhh-----------ccccc-C--
Confidence 6665 666654 444333222 23466776664332210 0000 000 00000 0
Q ss_pred ccccccccccccccccccCCchhHHHHHHHhcchhhhhHhhhcCcCCCCCCCcEEEEEeCCCCCCCcchHHHHHhcCCCC
Q 022534 183 YVLKLDKADVYRLPYLASSGPGFALLEAARKVNFKDISSRIGAGFSSGSWDKPVLVAWGISDKYLPQSVAEEFQKGNPNV 262 (295)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~ 262 (295)
.. +.....+. +. ...+...|+++++|++|..++...+..+.+...
T Consensus 186 ---~~---------------------~~~~~~SP---~~------~~~~~~~P~li~~G~~D~~~~~~qs~~~~~~l~-- 230 (261)
T d2pbla1 186 ---DA---------------------DAAIAESP---VE------MQNRYDAKVTVWVGGAERPAFLDQAIWLVEAWD-- 230 (261)
T ss_dssp ---CH---------------------HHHHHTCG---GG------CCCCCSCEEEEEEETTSCHHHHHHHHHHHHHHT--
T ss_pred ---CH---------------------HHHHHhCc---hh------hcccCCCeEEEEEecCCCchHHHHHHHHHHHhC--
Confidence 00 00000000 00 012457999999999998776677788877664
Q ss_pred eEEEEecCCCCCCCCC
Q 022534 263 VKLQMIEGAGHMPQED 278 (295)
Q Consensus 263 ~~~~~i~~~gH~~~~e 278 (295)
++.+++++..|+-.++
T Consensus 231 ~~~~~~~~~~HF~vi~ 246 (261)
T d2pbla1 231 ADHVIAFEKHHFNVIE 246 (261)
T ss_dssp CEEEEETTCCTTTTTG
T ss_pred CCceEeCCCCchhHHH
Confidence 5789999999976554
|
| >d1ju3a2 c.69.1.21 (A:5-351) Bacterial cocaine esterase N-terminal domain {Rhodococcus sp. mb1 [TaxId: 51612]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: PepX catalytic domain-like domain: Bacterial cocaine esterase N-terminal domain species: Rhodococcus sp. mb1 [TaxId: 51612]
Probab=99.07 E-value=3.3e-09 Score=90.88 Aligned_cols=126 Identities=8% Similarity=-0.077 Sum_probs=82.3
Q ss_pred eeeEEe-CcEEEEEEEcCCCC-CCCceEEEEcCCCCC-C---ccchhhHHHhhhCCCeEEEeCCCCCCCCCCCCCCCCCC
Q 022534 13 GSYIKS-GEYRWFVRETGSAD-SRLGTIVFLHGAPSH-S---YSYRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDF 86 (295)
Q Consensus 13 ~~~~~~-~~~~~~~~~~g~~~-~~~~~vv~lHG~~~~-~---~~w~~~~~~l~~~~~~via~Dl~G~G~S~~~~~~~~~~ 86 (295)
+-+|.. +|+++....+.+.. .+-|+||+.||++.. . ..+....+.|+++||.|+++|.||+|.|+......
T Consensus 7 ~v~ipmrDGv~L~~~vy~P~~~~~~P~il~~~pyg~~~~~~~~~~~~~~~~~a~~GY~vv~~d~RG~g~S~G~~~~~--- 83 (347)
T d1ju3a2 7 NVMVPMRDGVRLAVDLYRPDADGPVPVLLVRNPYDKFDVFAWSTQSTNWLEFVRDGYAVVIQDTRGLFASEGEFVPH--- 83 (347)
T ss_dssp EEEEECTTSCEEEEEEEEECCSSCEEEEEEEESSCTTCCHHHHTTSCCTHHHHHTTCEEEEEECTTSTTCCSCCCTT---
T ss_pred CeEEECCCCCEEEEEEEEcCCCCCEEEEEEEcCCCCccccCcCcccHHHHHHHHCCCEEEEEeeCCccccCCccccc---
Confidence 346666 68888887765433 335789999997642 2 23345567788889999999999999999754221
Q ss_pred CCCHHHHHHHHHHHHHHhCCC-CceEEEEecccch-HHHHHHHHhCcCccceeEEEcCCC
Q 022534 87 DFTENEFHEELDKLLDVLEVK-YPFFLVVQGFLVG-SYGLTWALKNPSRISKLAILNSPL 144 (295)
Q Consensus 87 ~~~~~~~~~~l~~~~~~l~~~-~~~~lv~~G~~~G-~~~~~~a~~~p~~v~~lil~~~p~ 144 (295)
.....-..++.+++.+.... ..+-++ |.|-| ..++..|+..|..++.++...+..
T Consensus 84 -~~~~~d~~d~i~w~~~q~~~~grVg~~--G~SygG~~~~~~A~~~~~~l~aiv~~~~~~ 140 (347)
T d1ju3a2 84 -VDDEADAEDTLSWILEQAWCDGNVGMF--GVSYLGVTQWQAAVSGVGGLKAIAPSMASA 140 (347)
T ss_dssp -TTHHHHHHHHHHHHHHSTTEEEEEEEC--EETHHHHHHHHHHTTCCTTEEEBCEESCCS
T ss_pred -cchhhhHHHHHHHHHhhccCCcceEee--eccccccchhhhhhcccccceeeeeccccc
Confidence 12333445666776665443 234443 55544 445667778888899888765443
|
| >d1qfma2 c.69.1.4 (A:431-710) Prolyl oligopeptidase, C-terminal domain {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Prolyl oligopeptidase, C-terminal domain domain: Prolyl oligopeptidase, C-terminal domain species: Pig (Sus scrofa) [TaxId: 9823]
Probab=99.02 E-value=9.8e-09 Score=84.41 Aligned_cols=61 Identities=15% Similarity=0.057 Sum_probs=43.9
Q ss_pred CCcEEEEEeCCCCCCCcchHHHHHhcC----------CCCeEEEEecCCCCCCCCCCh--HHHHHHHHHHHHh
Q 022534 233 DKPVLVAWGISDKYLPQSVAEEFQKGN----------PNVVKLQMIEGAGHMPQEDWP--EKVVDGLRYFFLN 293 (295)
Q Consensus 233 ~~P~l~i~G~~D~~~~~~~~~~~~~~~----------~~~~~~~~i~~~gH~~~~e~p--~~~~~~i~~fl~~ 293 (295)
.-|+|++||++|..+|+..+.++.+.+ ...++++++|++||-..-... .+....+.+||..
T Consensus 200 ~pP~LiihG~~D~~Vp~~~s~~l~~aL~~~g~~~~~~~~~~~l~~~~~~gHgf~~~~~~~~~~~~~~~~fl~k 272 (280)
T d1qfma2 200 YPSMLLLTADHDDRVVPLHSLKFIATLQYIVGRSRKQNNPLLIHVDTKAGHGAGKPTAKVIEEVSDMFAFIAR 272 (280)
T ss_dssp CCEEEEEEETTCCSSCTHHHHHHHHHHHHHTTTSTTCCSCEEEEEESSCCSSTTCCHHHHHHHHHHHHHHHHH
T ss_pred CCceEEeecccCCCCCHHHHHHHHHHHHHhhhhhhcCCCcEEEEEeCcCCCCCCCcHHHHHHHHHHHHHHHHH
Confidence 348999999999999998888776554 334789999999996543221 2333456678865
|
| >d1jjia_ c.69.1.2 (A:) Carboxylesterase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Carboxylesterase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=99.00 E-value=1.2e-08 Score=86.24 Aligned_cols=64 Identities=16% Similarity=0.080 Sum_probs=42.6
Q ss_pred ccceeeEEeCcEEEEEEEcCCCCCCCceEEEEcCCC---CCCccchhhHHHhhh-CCCeEEEeCCCCCC
Q 022534 10 REYGSYIKSGEYRWFVRETGSADSRLGTIVFLHGAP---SHSYSYRNVMSQMSD-AGFHCFAPDWLGFG 74 (295)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~vv~lHG~~---~~~~~w~~~~~~l~~-~~~~via~Dl~G~G 74 (295)
+....++...+..+.++.+.+. ++.|.||++||++ ++......+...+++ .|+.|+.+|.|..-
T Consensus 55 ~~~~~~i~~~~g~i~~~iy~P~-~~~P~il~iHGGg~~~g~~~~~~~~~~~l~~~~g~~Vv~v~Yrlap 122 (311)
T d1jjia_ 55 RVEDRTIKGRNGDIRVRVYQQK-PDSPVLVYYHGGGFVICSIESHDALCRRIARLSNSTVVSVDYRLAP 122 (311)
T ss_dssp EEEEEEEEETTEEEEEEEEESS-SSEEEEEEECCSTTTSCCTGGGHHHHHHHHHHHTSEEEEEECCCTT
T ss_pred eEEEEEEeCCCCcEEEEEEcCC-CCceEEEEEcCCCCccCChhhhhhhhhhhhhcCCcEEEEecccccc
Confidence 3344566665556666666543 3358899999974 455555666666644 49999999999543
|
| >d1lzla_ c.69.1.2 (A:) Heroin esterase {Rhodococcus sp. [TaxId: 1831]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Heroin esterase species: Rhodococcus sp. [TaxId: 1831]
Probab=98.91 E-value=5.6e-08 Score=81.99 Aligned_cols=43 Identities=12% Similarity=0.179 Sum_probs=31.7
Q ss_pred CCceEEEEcCCC---CCCccchhhHHHhhh-CCCeEEEeCCCCCCCC
Q 022534 34 RLGTIVFLHGAP---SHSYSYRNVMSQMSD-AGFHCFAPDWLGFGFS 76 (295)
Q Consensus 34 ~~~~vv~lHG~~---~~~~~w~~~~~~l~~-~~~~via~Dl~G~G~S 76 (295)
+.|.||++||++ ++......+...++. .||.|+.+|.|.....
T Consensus 77 ~~Pvvv~iHGGG~~~g~~~~~~~~~~~la~~~G~~V~~vdYrl~pe~ 123 (317)
T d1lzla_ 77 PVPVLLWIHGGGFAIGTAESSDPFCVEVARELGFAVANVEYRLAPET 123 (317)
T ss_dssp CEEEEEEECCSTTTSCCGGGGHHHHHHHHHHHCCEEEEECCCCTTTS
T ss_pred CCcEEEEecCcccccccccccchHHHhHHhhcCCccccccccccccc
Confidence 457899999964 455556666666654 4999999999976543
|
| >d1jkma_ c.69.1.2 (A:) Carboxylesterase {Bacillus subtilis, brefeldin A esterase [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Carboxylesterase species: Bacillus subtilis, brefeldin A esterase [TaxId: 1423]
Probab=98.85 E-value=7.2e-08 Score=82.93 Aligned_cols=123 Identities=11% Similarity=0.070 Sum_probs=66.6
Q ss_pred eEEeCcEEEEEEEcCC--CCCCCceEEEEcCCC---CCC--ccchhhHHHhhhCCCeEEEeCCCCCCCCCCCCCCCCCCC
Q 022534 15 YIKSGEYRWFVRETGS--ADSRLGTIVFLHGAP---SHS--YSYRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFD 87 (295)
Q Consensus 15 ~~~~~~~~~~~~~~g~--~~~~~~~vv~lHG~~---~~~--~~w~~~~~~l~~~~~~via~Dl~G~G~S~~~~~~~~~~~ 87 (295)
+...+|..+.+..+-+ .+.+.|+||++||++ ++. ..++.+...|++.|+.|+++|.|..+... +...+ .
T Consensus 84 i~~~dg~~i~~~iy~P~~~~~~~Pviv~~HGGG~~~gs~~~~~~~~~~~~la~~g~~VvsvdYRla~~~~-pe~~~---p 159 (358)
T d1jkma_ 84 ILGVDGNEITLHVFRPAGVEGVLPGLVYTHGGGMTILTTDNRVHRRWCTDLAAAGSVVVMVDFRNAWTAE-GHHPF---P 159 (358)
T ss_dssp EECTTSCEEEEEEEEETTCCSCEEEEEEECCSTTTSSCSSSHHHHHHHHHHHHTTCEEEEEECCCSEETT-EECCT---T
T ss_pred EeCCCCCEEEEEEEecCCCCCCCCeEEEecCCeeeeccccccccchHHHHHHhhhheeeeeeeccccccc-ccCCC---c
Confidence 3345666665554432 223457899999974 232 23556778888889999999999864332 11111 1
Q ss_pred CCHHHHHHHHHHHHH---HhCCCCceEEEEecccc-hHHHHHHHHh-----CcCccceeEEEcCCCC
Q 022534 88 FTENEFHEELDKLLD---VLEVKYPFFLVVQGFLV-GSYGLTWALK-----NPSRISKLAILNSPLT 145 (295)
Q Consensus 88 ~~~~~~~~~l~~~~~---~l~~~~~~~lv~~G~~~-G~~~~~~a~~-----~p~~v~~lil~~~p~~ 145 (295)
..++|....+..+.+ .++.++ +.++ |.|. |.+++..++. .+..+.++++. .|..
T Consensus 160 ~~l~D~~~a~~wl~~~~~~~~~~r-i~i~--G~SAGG~La~~~a~~~~~~~~~~~~~~~~~~-~p~~ 222 (358)
T d1jkma_ 160 SGVEDCLAAVLWVDEHRESLGLSG-VVVQ--GESGGGNLAIATTLLAKRRGRLDAIDGVYAS-IPYI 222 (358)
T ss_dssp HHHHHHHHHHHHHHHTHHHHTEEE-EEEE--EETHHHHHHHHHHHHHHHTTCGGGCSEEEEE-SCCC
T ss_pred hhhHHHHHHHHHHHHhccccCCcc-ceee--cccCchHHHHHHHHHHhhcCCCccccccccc-ccee
Confidence 123344333333333 244443 5454 5554 4555444322 34456767665 4544
|
| >d1lnsa3 c.69.1.21 (A:146-550) X-Prolyl dipeptidyl aminopeptidase PepX, middle domain {Lactococcus lactis [TaxId: 1358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: PepX catalytic domain-like domain: X-Prolyl dipeptidyl aminopeptidase PepX, middle domain species: Lactococcus lactis [TaxId: 1358]
Probab=98.79 E-value=7.3e-07 Score=77.77 Aligned_cols=80 Identities=13% Similarity=0.039 Sum_probs=53.1
Q ss_pred HHHhhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCC-------------------CceEEEEe
Q 022534 55 MSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEELDKLLDVLEVK-------------------YPFFLVVQ 115 (295)
Q Consensus 55 ~~~l~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~-------------------~~~~lv~~ 115 (295)
.++|+.+||.|+..|.||.|.|+..... ++.++ .+|..++++-+.-. ..+-++
T Consensus 129 ~~~~~~~GYavv~~D~RG~g~S~G~~~~-----~~~~e-~~D~~~~IeWl~~~~~~~~~~~~~~~~~q~WsnGkVGm~-- 200 (405)
T d1lnsa3 129 NDYFLTRGFASIYVAGVGTRSSDGFQTS-----GDYQQ-IYSMTAVIDWLNGRARAYTSRKKTHEIKASWANGKVAMT-- 200 (405)
T ss_dssp HHHHHTTTCEEEEECCTTSTTSCSCCCT-----TSHHH-HHHHHHHHHHHTTSSCEESSTTCCCEECCTTEEEEEEEE--
T ss_pred hHHHHhCCCEEEEECCCCCCCCCCcccc-----CChhh-hhhHHHHHHHHHhcccccccccccccccccccCCeeEEE--
Confidence 4568888999999999999999974321 23333 55666666655321 124444
Q ss_pred cccc-hHHHHHHHHhCcCccceeEEEcC
Q 022534 116 GFLV-GSYGLTWALKNPSRISKLAILNS 142 (295)
Q Consensus 116 G~~~-G~~~~~~a~~~p~~v~~lil~~~ 142 (295)
|.|- |......|...|..+++++..++
T Consensus 201 G~SY~G~~q~~aA~~~pp~LkAivp~~~ 228 (405)
T d1lnsa3 201 GKSYLGTMAYGAATTGVEGLELILAEAG 228 (405)
T ss_dssp EETHHHHHHHHHHTTTCTTEEEEEEESC
T ss_pred ecCHHHHHHHHHHhcCCccceEEEecCc
Confidence 5554 44455667788888998887654
|
| >d1mpxa2 c.69.1.21 (A:24-404) Alpha-amino acid ester hydrolase {Xanthomonas citri [TaxId: 346]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: PepX catalytic domain-like domain: Alpha-amino acid ester hydrolase species: Xanthomonas citri [TaxId: 346]
Probab=98.68 E-value=1.7e-06 Score=74.78 Aligned_cols=125 Identities=6% Similarity=-0.148 Sum_probs=73.0
Q ss_pred eEEe-CcEEEEEEEcCCCC-CCCceEEEEcCCCCC-----C--c----cchhhHHHhhhCCCeEEEeCCCCCCCCCCCCC
Q 022534 15 YIKS-GEYRWFVRETGSAD-SRLGTIVFLHGAPSH-----S--Y----SYRNVMSQMSDAGFHCFAPDWLGFGFSDKPEK 81 (295)
Q Consensus 15 ~~~~-~~~~~~~~~~g~~~-~~~~~vv~lHG~~~~-----~--~----~w~~~~~~l~~~~~~via~Dl~G~G~S~~~~~ 81 (295)
+|+. +|+++....+-+.. .+-|+||+.|+++.+ . . ......+.|+++||-|+.+|.||+|.|+....
T Consensus 28 ~i~~rDG~~L~~~v~~P~~~~~~P~il~~~pYg~~~~~~~~~~~~~~~~~~~~~~~~a~~Gy~vv~~d~RG~g~S~G~~~ 107 (381)
T d1mpxa2 28 MIPMRDGVKLHTVIVLPKGAKNAPIVLTRTPYDASGRTERLASPHMKDLLSAGDDVFVEGGYIRVFQDVRGKYGSEGDYV 107 (381)
T ss_dssp EEECTTSCEEEEEEEEETTCCSEEEEEEEESSCHHHHTCSSCCSSHHHHSCGGGHHHHHTTCEEEEEECTTSTTCCSCCC
T ss_pred EEECCCCCEEEEEEEEeCCCCCccEEEEEccCCCCCcccccccccccccchhHHHHHHhCCCEEEEEecCccCCCCCcee
Confidence 4444 58888876664433 335788889987531 1 1 12245577888999999999999999987421
Q ss_pred CCC----C-CCCCHHHHHHHHHHHHHHh----CCC-CceEEEEecccchH-HHHHHHHhCcCccceeEEEcC
Q 022534 82 GYD----D-FDFTENEFHEELDKLLDVL----EVK-YPFFLVVQGFLVGS-YGLTWALKNPSRISKLAILNS 142 (295)
Q Consensus 82 ~~~----~-~~~~~~~~~~~l~~~~~~l----~~~-~~~~lv~~G~~~G~-~~~~~a~~~p~~v~~lil~~~ 142 (295)
... . ..... +-++|..+.++.+ .++ ..+.++ |+|.|+ .++..|...|+.++.++...+
T Consensus 108 ~~~~~~~~~~~~~~-~~~~D~~~~i~w~~~~~~~~~~~vg~~--G~SygG~~~~~~a~~~~~~l~a~v~~~~ 176 (381)
T d1mpxa2 108 MTRPLRGPLNPSEV-DHATDAWDTIDWLVKNVSESNGKVGMI--GSSYEGFTVVMALTNPHPALKVAVPESP 176 (381)
T ss_dssp TTCCCSBTTBCSSC-CHHHHHHHHHHHHHHHCTTEEEEEEEE--EETHHHHHHHHHHTSCCTTEEEEEEESC
T ss_pred ccchhhhhcccchh-HHHHHHHHHHHHHhhcCCcCccceeee--cccHHHHHHHHHHhccccccceeeeecc
Confidence 110 0 00111 1234444443322 232 235454 666554 455667788888988887643
|
| >d1u4na_ c.69.1.2 (A:) Carboxylesterase {Alicyclobacillus acidocaldarius [TaxId: 405212]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Carboxylesterase species: Alicyclobacillus acidocaldarius [TaxId: 405212]
Probab=98.63 E-value=7.9e-07 Score=74.26 Aligned_cols=58 Identities=14% Similarity=0.066 Sum_probs=39.8
Q ss_pred CcEEEEEeCCCCCCCcchHHHHHhc---CCCCeEEEEecCCCCCCCC-----CChHHHHHHHHHHHHh
Q 022534 234 KPVLVAWGISDKYLPQSVAEEFQKG---NPNVVKLQMIEGAGHMPQE-----DWPEKVVDGLRYFFLN 293 (295)
Q Consensus 234 ~P~l~i~G~~D~~~~~~~~~~~~~~---~~~~~~~~~i~~~gH~~~~-----e~p~~~~~~i~~fl~~ 293 (295)
.|+++++|+.|..++ .+..|++. ....+++++++|++|-... +...+..+.+.+||+.
T Consensus 240 Pp~li~~g~~D~l~~--~~~~~~~~L~~~G~~v~~~~~~g~~Hgf~~~~~~~~~a~~~~~~~~~fl~~ 305 (308)
T d1u4na_ 240 PPAYIATAQYDPLRD--VGKLYAEALNKAGVKVEIENFEDLIHGFAQFYSLSPGATKALVRIAEKLRD 305 (308)
T ss_dssp CCEEEEEEEECTTHH--HHHHHHHHHHHTTCCEEEEEEEEEETTGGGGTTTSHHHHHHHHHHHHHHHH
T ss_pred CCeeEEecCcCCchH--HHHHHHHHHHHCCCCEEEEEECCCCEeCcccCCCCHHHHHHHHHHHHHHHH
Confidence 589999999997653 33444322 3345899999999995422 2234677778888865
|
| >d1ei9a_ c.69.1.13 (A:) Palmitoyl protein thioesterase 1 {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterases domain: Palmitoyl protein thioesterase 1 species: Cow (Bos taurus) [TaxId: 9913]
Probab=98.54 E-value=4.7e-08 Score=80.55 Aligned_cols=105 Identities=16% Similarity=0.165 Sum_probs=69.3
Q ss_pred eEEEEcCCCCC---CccchhhHHHhhhC--CCeEEEeCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhC-CCCce
Q 022534 37 TIVFLHGAPSH---SYSYRNVMSQMSDA--GFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEELDKLLDVLE-VKYPF 110 (295)
Q Consensus 37 ~vv~lHG~~~~---~~~w~~~~~~l~~~--~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~l~~~~~~l~-~~~~~ 110 (295)
||||+||++++ +..|..+.+.+.+. |+.|+++|......++... +..-.++++++.+.+.+++.. ..+++
T Consensus 7 PVVLvHGlg~s~~~~~~m~~l~~~l~~~~pG~~V~~l~~g~~~~~~~~~----~~~~~~~~~~e~v~~~I~~~~~~~~~v 82 (279)
T d1ei9a_ 7 PLVIWHGMGDSCCNPLSMGAIKKMVEKKIPGIHVLSLEIGKTLREDVEN----SFFLNVNSQVTTVCQILAKDPKLQQGY 82 (279)
T ss_dssp CEEEECCTTCCSCCTTTTHHHHHHHHHHSTTCCEEECCCSSSHHHHHHH----HHHSCHHHHHHHHHHHHHSCGGGTTCE
T ss_pred cEEEECCCCCCCCChHHHHHHHHHHHHHCCCeEEEEEEcCCCccccccc----chhhhHHHHHHHHHHHHHhccccccce
Confidence 89999999764 34677877777654 8899999987555443211 111134566667666666532 23457
Q ss_pred EEEEecccchHH-HHHHHHhCcC-ccceeEEEcCCCCCC
Q 022534 111 FLVVQGFLVGSY-GLTWALKNPS-RISKLAILNSPLTAS 147 (295)
Q Consensus 111 ~lv~~G~~~G~~-~~~~a~~~p~-~v~~lil~~~p~~~~ 147 (295)
.+| |||+|++ +-.++.++++ +|..+|.+++|....
T Consensus 83 ~lV--GhSqGGLiaR~~i~~~~~~~V~~lITLgsPH~Gv 119 (279)
T d1ei9a_ 83 NAM--GFSQGGQFLRAVAQRCPSPPMVNLISVGGQHQGV 119 (279)
T ss_dssp EEE--EETTHHHHHHHHHHHCCSSCEEEEEEESCCTTCB
T ss_pred eEE--EEccccHHHHHHHHHcCCCCcceEEEECCCCCCc
Confidence 787 7788765 4445556664 699999999886543
|
| >d1jjfa_ c.69.1.2 (A:) Feruloyl esterase domain of the cellulosomal xylanase z {Clostridium thermocellum [TaxId: 1515]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Feruloyl esterase domain of the cellulosomal xylanase z species: Clostridium thermocellum [TaxId: 1515]
Probab=98.40 E-value=1.3e-05 Score=64.68 Aligned_cols=119 Identities=8% Similarity=0.080 Sum_probs=60.3
Q ss_pred CcEEEEEEEcCC----CCCCCceEEEEcCCCCCCccch-------hhHHHhhhC-CCeEEEeCCCCCCCCCCCCCCCCCC
Q 022534 19 GEYRWFVRETGS----ADSRLGTIVFLHGAPSHSYSYR-------NVMSQMSDA-GFHCFAPDWLGFGFSDKPEKGYDDF 86 (295)
Q Consensus 19 ~~~~~~~~~~g~----~~~~~~~vv~lHG~~~~~~~w~-------~~~~~l~~~-~~~via~Dl~G~G~S~~~~~~~~~~ 86 (295)
.|....|..+-+ ++.+-|.|+++||.+++...|. .....+... +...+.....+.+.+...... ..
T Consensus 32 ~g~~~~~~v~lP~~y~~~~~~Pvvv~lHG~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~ 109 (255)
T d1jjfa_ 32 TNSTRPARVYLPPGYSKDKKYSVLYLLHGIGGSENDWFEGGGRANVIADNLIAEGKIKPLIIVTPNTNAAGPGIAD--GY 109 (255)
T ss_dssp TTEEEEEEEEECTTCCTTSCBCEEEEECCTTCCTTTTTTTTTCHHHHHHHHHHTTSSCCCEEEEECCCCCCTTCSC--HH
T ss_pred CCCEEEEEEEeCCCCCCCCCCcEEEEEecCCCChHHhhhhhHHHHHHHHHHHhhccCCcceeeecccccccccccc--cc
Confidence 356666665533 2233478999999887665552 122222222 222222222222322221111 00
Q ss_pred CCCHHHHHHHHHHHHHHh-C--CC-CceEEEEecccchH-HHHHHHHhCcCccceeEEEc
Q 022534 87 DFTENEFHEELDKLLDVL-E--VK-YPFFLVVQGFLVGS-YGLTWALKNPSRISKLAILN 141 (295)
Q Consensus 87 ~~~~~~~~~~l~~~~~~l-~--~~-~~~~lv~~G~~~G~-~~~~~a~~~p~~v~~lil~~ 141 (295)
....+.+++++...+++. . .+ +.+.++ |+|+|+ +++.+|+++|+.+++++.++
T Consensus 110 ~~~~~~~~~~li~~i~~~~~~~~d~~~i~i~--G~S~GG~~a~~~a~~~Pd~F~~v~~~s 167 (255)
T d1jjfa_ 110 ENFTKDLLNSLIPYIESNYSVYTDREHRAIA--GLSMGGGQSFNIGLTNLDKFAYIGPIS 167 (255)
T ss_dssp HHHHHHHHHTHHHHHHHHSCBCCSGGGEEEE--EETHHHHHHHHHHHTCTTTCSEEEEES
T ss_pred cchHHHHHHHHHHHHHHhhccccccceeEee--eccchhHHHHHHHHhCCCcccEEEEEc
Confidence 111234455555555542 1 22 224444 667664 56777899999999998774
|
| >d1wpxa1 c.69.1.5 (A:1-421) Serine carboxypeptidase II {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Serine carboxypeptidase-like domain: Serine carboxypeptidase II species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=98.38 E-value=7.7e-05 Score=64.86 Aligned_cols=61 Identities=21% Similarity=0.202 Sum_probs=49.9
Q ss_pred CCcEEEEEeCCCCCCCcchHHHHHhcCC------------------------------CCeEEEEecCCCCCCCCCChHH
Q 022534 233 DKPVLVAWGISDKYLPQSVAEEFQKGNP------------------------------NVVKLQMIEGAGHMPQEDWPEK 282 (295)
Q Consensus 233 ~~P~l~i~G~~D~~~~~~~~~~~~~~~~------------------------------~~~~~~~i~~~gH~~~~e~p~~ 282 (295)
++++|+..|+.|-+++...++.+-+.+. .+.+++.+.+|||+++.++|++
T Consensus 327 ~irVLIysGd~D~~~p~~Gte~~i~~L~w~~~~~f~~~~~~~w~~~~~~~~aG~~~~~~nltf~~V~~AGHmvP~d~P~~ 406 (421)
T d1wpxa1 327 DLPILVYAGDKDFICNWLGNKAWTDVLPWKYDEEFASQKVRNWTASITDEVAGEVKSYKHFTYLRVFNGGHMVPFDVPEN 406 (421)
T ss_dssp TCCEEEEEETTCSTTCHHHHHHHHHHCCSTTHHHHHHSCCEEEECTTTCSEEEEEEEETTEEEEEETTCCSSHHHHCHHH
T ss_pred CCeEEEEeCCcCccCCchhHHHHHHhCCCCcccchhcCcccceeecCCCeEEEEEEEECCeEEEEECCccccCcccCHHH
Confidence 5899999999999998776655443321 1247788999999999999999
Q ss_pred HHHHHHHHHHh
Q 022534 283 VVDGLRYFFLN 293 (295)
Q Consensus 283 ~~~~i~~fl~~ 293 (295)
..+.+++||.+
T Consensus 407 a~~m~~~fi~G 417 (421)
T d1wpxa1 407 ALSMVNEWIHG 417 (421)
T ss_dssp HHHHHHHHHTT
T ss_pred HHHHHHHHhcC
Confidence 99999999976
|
| >d1ivya_ c.69.1.5 (A:) Human 'protective protein', HPP {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Serine carboxypeptidase-like domain: Human 'protective protein', HPP species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.34 E-value=1e-05 Score=71.16 Aligned_cols=61 Identities=23% Similarity=0.195 Sum_probs=50.5
Q ss_pred CCcEEEEEeCCCCCCCcchHHHHHhcCCC----------------------------CeEEEEecCCCCCCCCCChHHHH
Q 022534 233 DKPVLVAWGISDKYLPQSVAEEFQKGNPN----------------------------VVKLQMIEGAGHMPQEDWPEKVV 284 (295)
Q Consensus 233 ~~P~l~i~G~~D~~~~~~~~~~~~~~~~~----------------------------~~~~~~i~~~gH~~~~e~p~~~~ 284 (295)
+++||+..|+.|-+|+...++.+.+.+.. +.+++.|.+|||+++.++|+...
T Consensus 361 ~~rVliy~Gd~D~~~~~~gte~~i~~l~~~~~~~~~~~~~~~~~~~~~v~G~v~~~~nltf~~V~~AGHmVP~dqP~~a~ 440 (452)
T d1ivya_ 361 KYQILLYNGDVDMACNFMGDEWFVDSLNQKMEVQRRPWLVKYGDSGEQIAGFVKEFSHIAFLTIKGAGHMVPTDKPLAAF 440 (452)
T ss_dssp CCEEEEEEETTCSSSCHHHHHHHHHHTCCCEEEEEEEEEEECTTSCEEEEEEEEEESSEEEEEETTCCSSHHHHCHHHHH
T ss_pred CCEEEEEeCCcceeCCCHHHHHHHHhcCCccccccccceecccCCCCEEEEEEEEECCeEEEEECCccccCcccCHHHHH
Confidence 58999999999999998777665443321 24567889999999999999999
Q ss_pred HHHHHHHHh
Q 022534 285 DGLRYFFLN 293 (295)
Q Consensus 285 ~~i~~fl~~ 293 (295)
+.+++||.+
T Consensus 441 ~m~~~fi~g 449 (452)
T d1ivya_ 441 TMFSRFLNK 449 (452)
T ss_dssp HHHHHHHTT
T ss_pred HHHHHHHcC
Confidence 999999975
|
| >d1r88a_ c.69.1.3 (A:) Antigen pt51/mpb51 {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Mycobacterial antigens domain: Antigen pt51/mpb51 species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=98.27 E-value=1.5e-05 Score=65.06 Aligned_cols=102 Identities=14% Similarity=0.213 Sum_probs=63.3
Q ss_pred ceEEEEcCCCC--CCccchh---hHHHhhhCCCeEEEeCCCCCC-CCCCCCCCCCCCCCCHHHHHHHHHHHHHH-hCCC-
Q 022534 36 GTIVFLHGAPS--HSYSYRN---VMSQMSDAGFHCFAPDWLGFG-FSDKPEKGYDDFDFTENEFHEELDKLLDV-LEVK- 107 (295)
Q Consensus 36 ~~vv~lHG~~~--~~~~w~~---~~~~l~~~~~~via~Dl~G~G-~S~~~~~~~~~~~~~~~~~~~~l~~~~~~-l~~~- 107 (295)
|+|.||||.++ +...|.. +.+..++.++-|++||--+.+ .++.+... ...| ...+.++|..++++ ..++
T Consensus 28 pvlylLhG~~g~~~~~~w~~~~~~~~~~~~~~~iVV~p~g~~~~~y~~~~~~~--~~~~-~tfl~~eL~~~i~~~~~~d~ 104 (267)
T d1r88a_ 28 HAVYLLDAFNAGPDVSNWVTAGNAMNTLAGKGISVVAPAGGAYSMYTNWEQDG--SKQW-DTFLSAELPDWLAANRGLAP 104 (267)
T ss_dssp SEEEEECCSSCCSSSCHHHHTSCHHHHHTTSSSEEEEECCCTTSTTSBCSSCT--TCBH-HHHHHTHHHHHHHHHSCCCS
T ss_pred CEEEEcCCCCCCCCcchhhhccHHHHHHhhCCeEEEEECCCCCcCCccccccc--cccH-HHHHHHHHHHHHHHhcCCCC
Confidence 69999999754 5556754 455566678999999842111 12222111 1111 23456678877765 3433
Q ss_pred CceEEEEecccchH-HHHHHHHhCcCccceeEEEcC
Q 022534 108 YPFFLVVQGFLVGS-YGLTWALKNPSRISKLAILNS 142 (295)
Q Consensus 108 ~~~~lv~~G~~~G~-~~~~~a~~~p~~v~~lil~~~ 142 (295)
+...+ .|+|+|+ .++.+|+++|+++++++.+++
T Consensus 105 ~r~~i--~G~SmGG~~Al~la~~~Pd~F~av~~~SG 138 (267)
T d1r88a_ 105 GGHAA--VGAAQGGYGAMALAAFHPDRFGFAGSMSG 138 (267)
T ss_dssp SCEEE--EEETHHHHHHHHHHHHCTTTEEEEEEESC
T ss_pred CceEE--EEEcchHHHHHHHHHhCcccccEEEEeCC
Confidence 22333 3788776 467889999999999988854
|
| >d1rp1a2 c.69.1.19 (A:1-336) Pancreatic lipase, N-terminal domain {Dog (Canis familiaris) [TaxId: 9615]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Pancreatic lipase, N-terminal domain domain: Pancreatic lipase, N-terminal domain species: Dog (Canis familiaris) [TaxId: 9615]
Probab=98.17 E-value=4.1e-07 Score=76.65 Aligned_cols=102 Identities=14% Similarity=0.194 Sum_probs=60.6
Q ss_pred CCceEEEEcCCCCCCcc-ch-hhHHH-hhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH----HhCC
Q 022534 34 RLGTIVFLHGAPSHSYS-YR-NVMSQ-MSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEELDKLLD----VLEV 106 (295)
Q Consensus 34 ~~~~vv~lHG~~~~~~~-w~-~~~~~-l~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~l~~~~~----~l~~ 106 (295)
.+|+++++|||.++... |. .+.+. |...++.||++|+... ++. .|...........+.|.++++ ..++
T Consensus 69 ~~pt~iiiHGw~~~~~~~~~~~~~~a~l~~~d~NVI~VDW~~~--a~~---~Y~~a~~n~~~Vg~~ia~~i~~l~~~~g~ 143 (337)
T d1rp1a2 69 DKKTRFIIHGFIDKGEENWLLDMCKNMFKVEEVNCICVDWKKG--SQT---SYTQAANNVRVVGAQVAQMLSMLSANYSY 143 (337)
T ss_dssp TSEEEEEECCCCCTTCTTHHHHHHHHHTTTCCEEEEEEECHHH--HSS---CHHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_pred CCCEEEEeCCCcCCCCcchHHHHHHHHHhcCCceEEEEeeccc--cCc---chHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 36899999999765543 43 44444 5555799999999753 221 110000011223344444444 4444
Q ss_pred C-CceEEEEecccchHHHHHHHHhCcCccceeEEEcC
Q 022534 107 K-YPFFLVVQGFLVGSYGLTWALKNPSRISKLAILNS 142 (295)
Q Consensus 107 ~-~~~~lv~~G~~~G~~~~~~a~~~p~~v~~lil~~~ 142 (295)
+ +.++|| |||+|+=.+.+|.++..++.+++.+++
T Consensus 144 ~~~~vhlI--GhSLGAhvAG~aG~~~~~l~rItgLDP 178 (337)
T d1rp1a2 144 SPSQVQLI--GHSLGAHVAGEAGSRTPGLGRITGLDP 178 (337)
T ss_dssp CGGGEEEE--EETHHHHHHHHHHHTSTTCCEEEEESC
T ss_pred ChhheEEE--eecHHHhhhHHHHHhhccccceeccCC
Confidence 2 347887 777776334566667778999998874
|
| >d3c8da2 c.69.1.2 (A:151-396) Enterochelin esterase, catalytic domain {Shigella flexneri 2a str. 2457T [TaxId: 198215]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Enterochelin esterase, catalytic domain species: Shigella flexneri 2a str. 2457T [TaxId: 198215]
Probab=98.06 E-value=3.3e-06 Score=68.05 Aligned_cols=105 Identities=15% Similarity=0.084 Sum_probs=54.0
Q ss_pred CCceEEEEcCCC--CCCccchhhHHHhhhCCC-eEEEeCCCCCCCCCCCCCCC-CCCCCCHHHHHHHHHHHHHHh---CC
Q 022534 34 RLGTIVFLHGAP--SHSYSYRNVMSQMSDAGF-HCFAPDWLGFGFSDKPEKGY-DDFDFTENEFHEELDKLLDVL---EV 106 (295)
Q Consensus 34 ~~~~vv~lHG~~--~~~~~w~~~~~~l~~~~~-~via~Dl~G~G~S~~~~~~~-~~~~~~~~~~~~~l~~~~~~l---~~ 106 (295)
+.|+||++||.+ .....+ ..++.|.++++ .++.+..+..+.+....... .+..| .+.+.+++..++++. +.
T Consensus 43 ~~Pvvv~lhG~~~~~~~~~~-~~l~~l~~~~~~~~~i~v~~~~~~~~~~~~~~~~~~~~-~~~~~~el~~~v~~~~~~~~ 120 (246)
T d3c8da2 43 ERPLAVLLDGEFWAQSMPVW-PVLTSLTHRQQLPPAVYVLIDAIDTTHRAHELPCNADF-WLAVQQELLPLVKVIAPFSD 120 (246)
T ss_dssp CCCEEEESSHHHHHHTSCCH-HHHHHHHHTTSSCSCEEEEECCCSHHHHHHHSSSCHHH-HHHHHHTHHHHHHHHSCCCC
T ss_pred CCCEEEEeCCcchhccCcHH-HHHHHHHHhCCCCceEEeecccccccccccccCccHHH-HHHHHHHhhhHHHHhccccc
Confidence 458999999954 333444 34455554443 22222222222222100000 01111 233455666666653 22
Q ss_pred C-CceEEEEecccchH-HHHHHHHhCcCccceeEEEcC
Q 022534 107 K-YPFFLVVQGFLVGS-YGLTWALKNPSRISKLAILNS 142 (295)
Q Consensus 107 ~-~~~~lv~~G~~~G~-~~~~~a~~~p~~v~~lil~~~ 142 (295)
+ +.+.++ |+|+|+ .++.++.++|+++.+++.+++
T Consensus 121 d~~~~~i~--G~S~GG~~al~~~~~~P~~F~a~~~~sg 156 (246)
T d3c8da2 121 RADRTVVA--GQSFGGLSALYAGLHWPERFGCVLSQSG 156 (246)
T ss_dssp CGGGCEEE--EETHHHHHHHHHHHHCTTTCCEEEEESC
T ss_pred CccceEEE--ecCchhHHHhhhhccCCchhcEEEcCCc
Confidence 2 223444 677665 567788899999999998854
|
| >d1dqza_ c.69.1.3 (A:) Antigen 85c {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Mycobacterial antigens domain: Antigen 85c species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=97.99 E-value=8.9e-05 Score=60.62 Aligned_cols=108 Identities=16% Similarity=0.169 Sum_probs=65.1
Q ss_pred CceEEEEcCCCC--CCccchh---hHHHhhhCCCeEEEeCCCCCCCCC-C--CCCC-CCCCCCCHH-HHHHHHHHHHHHh
Q 022534 35 LGTIVFLHGAPS--HSYSYRN---VMSQMSDAGFHCFAPDWLGFGFSD-K--PEKG-YDDFDFTEN-EFHEELDKLLDVL 104 (295)
Q Consensus 35 ~~~vv~lHG~~~--~~~~w~~---~~~~l~~~~~~via~Dl~G~G~S~-~--~~~~-~~~~~~~~~-~~~~~l~~~~~~l 104 (295)
.|+|.|+||.++ +...|.. +.+.+++.++-|++||--..+... . +... .....+.-+ .++++|...+++.
T Consensus 29 ~p~lyllhG~~g~~d~~~W~~~~~~~~~~~~~~~ivV~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~~i~~~ 108 (280)
T d1dqza_ 29 PHAVYLLDGLRAQDDYNGWDINTPAFEEYYQSGLSVIMPVGGQSSFYTDWYQPSQSNGQNYTYKWETFLTREMPAWLQAN 108 (280)
T ss_dssp SSEEEECCCTTCCSSSCHHHHHSCHHHHHTTSSSEEEEECCCTTCTTSBCSSSCTTTTCCSCCBHHHHHHTHHHHHHHHH
T ss_pred CCEEEECCCCCCCCccchhhhcchHHHHHHhCCcEEEEECCCCCCcCccccCCcccccCCcchhHHHHHHHHHHHHHHHh
Confidence 379999999754 5566763 445666779999999953322211 1 1000 001111222 3567777777753
Q ss_pred -CCC-CceEEEEecccchH-HHHHHHHhCcCccceeEEEcCCC
Q 022534 105 -EVK-YPFFLVVQGFLVGS-YGLTWALKNPSRISKLAILNSPL 144 (295)
Q Consensus 105 -~~~-~~~~lv~~G~~~G~-~~~~~a~~~p~~v~~lil~~~p~ 144 (295)
..+ +.+.+. |+|+|+ .++.+|+++|+++++++.+++.+
T Consensus 109 ~~~d~~r~~i~--G~SmGG~~Al~lA~~~Pd~F~av~s~SG~~ 149 (280)
T d1dqza_ 109 KGVSPTGNAAV--GLSMSGGSALILAAYYPQQFPYAASLSGFL 149 (280)
T ss_dssp HCCCSSSCEEE--EETHHHHHHHHHHHHCTTTCSEEEEESCCC
T ss_pred cCCCCCceEEE--EechHHHHHHHHHHhCcCceeEEEEecCcc
Confidence 222 224443 788775 46788999999999999885433
|
| >d2b9va2 c.69.1.21 (A:50-434) Alpha-amino acid ester hydrolase {Acetobacter pasteurianus [TaxId: 438]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: PepX catalytic domain-like domain: Alpha-amino acid ester hydrolase species: Acetobacter pasteurianus [TaxId: 438]
Probab=97.97 E-value=1.9e-05 Score=67.99 Aligned_cols=128 Identities=7% Similarity=-0.137 Sum_probs=74.4
Q ss_pred eeeEEe-CcEEEEEEEcCCCC-CCCceEEEEcCCCCC------------CccchhhHHHhhhCCCeEEEeCCCCCCCCCC
Q 022534 13 GSYIKS-GEYRWFVRETGSAD-SRLGTIVFLHGAPSH------------SYSYRNVMSQMSDAGFHCFAPDWLGFGFSDK 78 (295)
Q Consensus 13 ~~~~~~-~~~~~~~~~~g~~~-~~~~~vv~lHG~~~~------------~~~w~~~~~~l~~~~~~via~Dl~G~G~S~~ 78 (295)
.-+|.. +|++++...+-+.+ .+-|+||+.|.++.. ........+.|+++||-|+.+|.||+|.|+.
T Consensus 30 ~v~ipmrDG~~L~~~v~~P~~~~~~P~il~~tpY~~~~~~~~~~~~~~~~~~~~~~~~~~a~~Gy~vv~~d~RG~g~S~G 109 (385)
T d2b9va2 30 EVMVPMRDGVKLYTVIVIPKNARNAPILLTRTPYNAKGRANRVPNALTMREVLPQGDDVFVEGGYIRVFQDIRGKYGSQG 109 (385)
T ss_dssp EEEEECTTSCEEEEEEEEETTCCSEEEEEEEESSCHHHHTCSSTTCSSHHHHSCGGGHHHHHTTCEEEEEECTTSTTCCS
T ss_pred EEEEECCCCCEEEEEEEEcCCCCceeEEEEEccCCCCCccccCCcccccccccchHHHHHHhCCcEEEEEcCCcccCCCC
Confidence 445666 58888887765433 334677777766411 1123355677888999999999999999997
Q ss_pred CCCCCC-----CCCCCHHHHHHHHHHHHHHh----CC-CCceEEEEecccchH-HHHHHHHhCcCccceeEEEcCC
Q 022534 79 PEKGYD-----DFDFTENEFHEELDKLLDVL----EV-KYPFFLVVQGFLVGS-YGLTWALKNPSRISKLAILNSP 143 (295)
Q Consensus 79 ~~~~~~-----~~~~~~~~~~~~l~~~~~~l----~~-~~~~~lv~~G~~~G~-~~~~~a~~~p~~v~~lil~~~p 143 (295)
.-.... ...+... -++|..+.++.+ .+ +..+-++ |+|.|+ .++..|...|+.++.++...+.
T Consensus 110 ~~~~~~~~~~~~~~~~~~-e~~D~~~~i~w~~~q~~~~~g~vg~~--G~SygG~~~~~~a~~~~~~l~a~~~~~~~ 182 (385)
T d2b9va2 110 DYVMTRPPHGPLNPTKTD-ETTDAWDTVDWLVHNVPESNGRVGMT--GSSYEGFTVVMALLDPHPALKVAAPESPM 182 (385)
T ss_dssp CCCTTCCCSBTTBCSSCC-HHHHHHHHHHHHHHSCTTEEEEEEEE--EEEHHHHHHHHHHTSCCTTEEEEEEEEEC
T ss_pred ceeeccccccccccchhh-HHHHHHHHHHHHHhccCccccceeec--cccHHHHHHHHHHhccCCcceEEEEeccc
Confidence 421110 0011111 134444444433 22 2234444 666544 4556677888888888766443
|
| >d1ku0a_ c.69.1.18 (A:) Lipase L1 {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Bacterial lipase domain: Lipase L1 species: Bacillus stearothermophilus [TaxId: 1422]
Probab=97.93 E-value=4.5e-05 Score=65.29 Aligned_cols=96 Identities=11% Similarity=0.081 Sum_probs=63.5
Q ss_pred CceEEEEcCCCCC-------Cccchh----hHHHhhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
Q 022534 35 LGTIVFLHGAPSH-------SYSYRN----VMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEELDKLLDV 103 (295)
Q Consensus 35 ~~~vv~lHG~~~~-------~~~w~~----~~~~l~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~l~~~~~~ 103 (295)
+=||||+||+.+- ...|.- +-+.|.+.|++|++.....++ |+++=+..|...++.
T Consensus 7 ~yPIVLvHGl~Gf~~~~l~~~~YW~G~~~~I~~~L~~~G~~V~~~~V~p~~--------------S~~~RA~eL~~~I~~ 72 (388)
T d1ku0a_ 7 DAPIVLLHGFTGWGREEMLGFKYWGGVRGDIEQWLNDNGYRTYTLAVGPLS--------------SNWDRACEAYAQLVG 72 (388)
T ss_dssp CCCEEEECCSSCCCTTSGGGCCTTTTTTCCHHHHHHHTTCCEEECCCCSSB--------------CHHHHHHHHHHHHHC
T ss_pred CCCEEEeCCcccCCccccCcccccCCchhhhHHHHHhCCCEEEEeccCCcc--------------CHHHHHHHHHHHHhh
Confidence 3489999998653 234653 667798889999999886433 344555566666553
Q ss_pred h----------------------------CCCCceEEEEecccchHHHHHHHH-h-------------------------
Q 022534 104 L----------------------------EVKYPFFLVVQGFLVGSYGLTWAL-K------------------------- 129 (295)
Q Consensus 104 l----------------------------~~~~~~~lv~~G~~~G~~~~~~a~-~------------------------- 129 (295)
. +..+|+.|| |||+|+..+.+++ .
T Consensus 73 ~~~d~G~~hs~~~~~~~~~r~y~g~~~~~~~~~kVnLI--gHS~GGld~Ryl~~~l~~~~~~~~~~~~~~~~~~~~l~~~ 150 (388)
T d1ku0a_ 73 GTVDYGAAHAAKHGHARFGRTYPGLLPELKRGGRVHII--AHSQGGQTARMLVSLLENGSQEEREYAKEHNVSLSPLFEG 150 (388)
T ss_dssp EEEECCHHHHHHHTSCSEEEEECCSCGGGGGTCCEEEE--EETTHHHHHHHHHHHHHHCCHHHHHHHHHHTCCCCGGGTC
T ss_pred hhhhhhHhHHhhhcccccCccCcccccccccCCceeEe--ecccccHHHHHHHHHhcccccccccccccccccccccccc
Confidence 2 112478898 6788876555433 1
Q ss_pred CcCccceeEEEcCCCCC
Q 022534 130 NPSRISKLAILNSPLTA 146 (295)
Q Consensus 130 ~p~~v~~lil~~~p~~~ 146 (295)
.++.|++|+.+++|...
T Consensus 151 ~~~~V~SvTTIsTPH~G 167 (388)
T d1ku0a_ 151 GHRFVLSVTTIATPHDG 167 (388)
T ss_dssp CCCCEEEEEEESCCTTC
T ss_pred CCcceEEEEeccCCCCC
Confidence 23479999999888754
|
| >d1bu8a2 c.69.1.19 (A:1-336) Pancreatic lipase, N-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Pancreatic lipase, N-terminal domain domain: Pancreatic lipase, N-terminal domain species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=97.92 E-value=2.4e-06 Score=71.74 Aligned_cols=102 Identities=15% Similarity=0.242 Sum_probs=60.6
Q ss_pred CCceEEEEcCCCCCCcc-ch-hhHHH-hhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH----hCC
Q 022534 34 RLGTIVFLHGAPSHSYS-YR-NVMSQ-MSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEELDKLLDV----LEV 106 (295)
Q Consensus 34 ~~~~vv~lHG~~~~~~~-w~-~~~~~-l~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~l~~~~~~----l~~ 106 (295)
.+|+++++|||.++... |. .+.+. |...++.||++|+... |+.. |...........+.+..+++. .++
T Consensus 69 ~~pt~iiiHG~~~~~~~~~~~~~~~a~l~~~d~NVi~VDW~~~--a~~~---Y~~a~~n~~~Vg~~ia~~i~~l~~~~g~ 143 (338)
T d1bu8a2 69 DRKTRFIVHGFIDKGEDGWLLDMCKKMFQVEKVNCICVDWRRG--SRTE---YTQASYNTRVVGAEIAFLVQVLSTEMGY 143 (338)
T ss_dssp TSEEEEEECCSCCTTCTTHHHHHHHHHHTTCCEEEEEEECHHH--HSSC---HHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_pred CCceEEEeCcccCCCCcccHHHHHHHHHhcCCceEEEEechhh--cccc---hHHHHHhHHHHHHHHHHHHHHHHHhcCC
Confidence 47899999999765443 43 44444 5555799999999753 2211 100011123344445555543 333
Q ss_pred C-CceEEEEecccchH-HHHHHHHhCcCccceeEEEcC
Q 022534 107 K-YPFFLVVQGFLVGS-YGLTWALKNPSRISKLAILNS 142 (295)
Q Consensus 107 ~-~~~~lv~~G~~~G~-~~~~~a~~~p~~v~~lil~~~ 142 (295)
. +.++|| |||.|+ ++...+...+.+|.+++-+++
T Consensus 144 ~~~~vhlI--GhSLGAhiaG~ag~~l~~kigrItgLDP 179 (338)
T d1bu8a2 144 SPENVHLI--GHSLGAHVVGEAGRRLEGHVGRITGLDP 179 (338)
T ss_dssp CGGGEEEE--EETHHHHHHHHHHHHTTTCSSEEEEESC
T ss_pred CcceeEEE--eccHHHHHHHHHHHhhcccccccccccc
Confidence 2 347888 777775 555555556678999998874
|
| >d1sfra_ c.69.1.3 (A:) Antigen 85a {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Mycobacterial antigens domain: Antigen 85a species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=97.89 E-value=0.0001 Score=60.40 Aligned_cols=108 Identities=16% Similarity=0.168 Sum_probs=67.4
Q ss_pred CCceEEEEcCCCC--CCccchh---hHHHhhhCCCeEEEeCCCCCCCCCCCCCCC------CCCCCCHHHHHHHHHHHHH
Q 022534 34 RLGTIVFLHGAPS--HSYSYRN---VMSQMSDAGFHCFAPDWLGFGFSDKPEKGY------DDFDFTENEFHEELDKLLD 102 (295)
Q Consensus 34 ~~~~vv~lHG~~~--~~~~w~~---~~~~l~~~~~~via~Dl~G~G~S~~~~~~~------~~~~~~~~~~~~~l~~~~~ 102 (295)
+.|+|+++||+++ +...|.. +.+.+++.++.++++|..+.+......... ....| ...+++++...++
T Consensus 33 ~~Pvl~llhG~~~~~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~el~~~i~ 111 (288)
T d1sfra_ 33 NSPALYLLDGLRAQDDFSGWDINTPAFEWYDQSGLSVVMPVGGQSSFYSDWYQPACGKAGCQTYKW-ETFLTSELPGWLQ 111 (288)
T ss_dssp TBCEEEEECCTTCCSSSCHHHHHCCHHHHHTTSSCEEEEECCCTTCTTCBCSSCEEETTEEECCBH-HHHHHTHHHHHHH
T ss_pred CceEEEEcCCCCCCCcchhhhhhccHHHHHHhCCCEEEEeccCCCCCCccccCcccccccccchhH-HHHHHHHhHHHHH
Confidence 4589999999775 4455643 345566678999999988777554321100 01111 2334566666665
Q ss_pred H-hCCCC-ceEEEEecccchH-HHHHHHHhCcCccceeEEEcCCC
Q 022534 103 V-LEVKY-PFFLVVQGFLVGS-YGLTWALKNPSRISKLAILNSPL 144 (295)
Q Consensus 103 ~-l~~~~-~~~lv~~G~~~G~-~~~~~a~~~p~~v~~lil~~~p~ 144 (295)
+ ..++. .+.+ .|+|+|+ +++.+|+++|+++.+++.+++.+
T Consensus 112 ~~~~~d~~r~~i--~G~S~GG~~A~~~a~~~pd~f~av~~~Sg~~ 154 (288)
T d1sfra_ 112 ANRHVKPTGSAV--VGLSMAASSALTLAIYHPQQFVYAGAMSGLL 154 (288)
T ss_dssp HHHCBCSSSEEE--EEETHHHHHHHHHHHHCTTTEEEEEEESCCS
T ss_pred HhcCCCCCceEE--EEEccHHHHHHHHHHhccccccEEEEecCcc
Confidence 4 44431 2333 3778765 56778899999999998885433
|
| >d1pv1a_ c.69.1.34 (A:) Hypothetical esterase YJL068C {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Hypothetical esterase YJL068C domain: Hypothetical esterase YJL068C species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=97.64 E-value=0.00073 Score=55.67 Aligned_cols=105 Identities=20% Similarity=0.248 Sum_probs=57.7
Q ss_pred CceEEEEcCCCCCCccchh---hHHHhhhCCCeEEEeCCCC----------------CCCCCCCCCCCC--CCCCCH-HH
Q 022534 35 LGTIVFLHGAPSHSYSYRN---VMSQMSDAGFHCFAPDWLG----------------FGFSDKPEKGYD--DFDFTE-NE 92 (295)
Q Consensus 35 ~~~vv~lHG~~~~~~~w~~---~~~~l~~~~~~via~Dl~G----------------~G~S~~~~~~~~--~~~~~~-~~ 92 (295)
-|+|.+|||++++...|.. ......+.+..|+.++..+ .+.|-....... ...+.. +.
T Consensus 49 yPVLYlLhG~~~~~~~w~~~~~~~~~~~~~~~~vv~~~~~p~~~~~~~~~~~~~~~g~~~~~y~d~~~~p~~~~~~~~~~ 128 (299)
T d1pv1a_ 49 IPTVFYLSGLTCTPDNASEKAFWQFQADKYGFAIVFPDTSPRGDEVANDPEGSWDFGQGAGFYLNATQEPYAQHYQMYDY 128 (299)
T ss_dssp BCEEEEECCTTCCHHHHHHHSCHHHHHHHHTCEEEECCSSCCSTTSCCCTTCCSSSSSSCCTTCBCCSHHHHTTCBHHHH
T ss_pred CCEEEEcCCCCCCHHHHHHhhhHHHHHHHcCCceecCCCcccccccCCcccccccccCCCccccccccCCcccccchHHH
Confidence 4789999999998888843 2233334478888887542 222211100000 001111 23
Q ss_pred HHHHHHHHHHH-hCCC--------CceEEEEecccchHHH-HHHHHh--CcCccceeEEEc
Q 022534 93 FHEELDKLLDV-LEVK--------YPFFLVVQGFLVGSYG-LTWALK--NPSRISKLAILN 141 (295)
Q Consensus 93 ~~~~l~~~~~~-l~~~--------~~~~lv~~G~~~G~~~-~~~a~~--~p~~v~~lil~~ 141 (295)
+.++|..++++ +... ....+. |+|||+++ +.+|++ +|++..++..++
T Consensus 129 i~~EL~p~i~~~~~~~~~r~~~~~~~~~I~--G~SmGG~gAl~~al~~~~p~~f~~~~s~s 187 (299)
T d1pv1a_ 129 IHKELPQTLDSHFNKNGDVKLDFLDNVAIT--GHSMGGYGAICGYLKGYSGKRYKSCSAFA 187 (299)
T ss_dssp HHTHHHHHHHHHHCC-----BCSSSSEEEE--EETHHHHHHHHHHHHTGGGTCCSEEEEES
T ss_pred HHHHHHHHHHHhCCcccccccccccceEEE--eecccHHHHHHHHHHhcCCCceEEEeecc
Confidence 45677777775 2221 113343 78888764 556765 588888777664
|
| >d2gzsa1 c.69.1.38 (A:41-305) Enterobactin and salmochelin hydrolase IroE {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: IroE-like domain: Enterobactin and salmochelin hydrolase IroE species: Escherichia coli [TaxId: 562]
Probab=97.59 E-value=0.00013 Score=58.68 Aligned_cols=55 Identities=13% Similarity=-0.023 Sum_probs=30.5
Q ss_pred CCcEEEEEeCC--------CCCCCcchHHHHHhc---CCCCeEEEEecCCCCCCCCCChHHHHHHHHH
Q 022534 233 DKPVLVAWGIS--------DKYLPQSVAEEFQKG---NPNVVKLQMIEGAGHMPQEDWPEKVVDGLRY 289 (295)
Q Consensus 233 ~~P~l~i~G~~--------D~~~~~~~~~~~~~~---~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~ 289 (295)
..|+++.+|+. |..++.+.+.++.+. ....+++.++||++|-.. .|..+..+|+.
T Consensus 196 ~~~~~~~~g~~~~~~~~~~d~~~~~~~~~~l~~~L~~~g~~~~~~~~pG~~Hg~~--~~~s~~~~l~~ 261 (265)
T d2gzsa1 196 TKHLAIMEGSATQGDNRETHAVGVLSKIHTTLTILKDKGVNAVFWDFPNLGHGPM--FNASFRQALLD 261 (265)
T ss_dssp TCEEEEEECCC-----------CHHHHHHHHHHHHHHTTCCEEEEECTTCCHHHH--HHHHHHHHHHH
T ss_pred CCcEEEEcCCcccccccccccchhHHHHHHHHHHHHHCCCCEEEEEcCCCCcchH--HHHHHHHHHHH
Confidence 45566666655 544555555555432 233589999999999532 24445554444
|
| >d1wb4a1 c.69.1.2 (A:803-1075) Feruloyl esterase domain of the cellulosomal xylanase y {Clostridium thermocellum [TaxId: 1515]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Feruloyl esterase domain of the cellulosomal xylanase y species: Clostridium thermocellum [TaxId: 1515]
Probab=97.29 E-value=0.0029 Score=50.48 Aligned_cols=97 Identities=12% Similarity=0.183 Sum_probs=53.6
Q ss_pred CceEEEEcCCCCCCccch-------hhHHHhh----hCCCeEEEeCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
Q 022534 35 LGTIVFLHGAPSHSYSYR-------NVMSQMS----DAGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEELDKLLDV 103 (295)
Q Consensus 35 ~~~vv~lHG~~~~~~~w~-------~~~~~l~----~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~l~~~~~~ 103 (295)
-|+|+++||.+++...|. .+++.+. ...+.|+.++..+.+..... + .......+....+.
T Consensus 55 yPvl~~lhG~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~--------~-~~~~~~~~~~~~~~ 125 (273)
T d1wb4a1 55 YNIFYLMHGGGENENTIFSNDVKLQNILDHAIMNGELEPLIVVTPTFNGGNCTAQN--------F-YQEFRQNVIPFVES 125 (273)
T ss_dssp CEEEEEECCTTCCTTSTTSTTTCHHHHHHHHHHHTSSCCEEEEECCSCSTTCCTTT--------H-HHHHHHTHHHHHHH
T ss_pred ceEEEEEeCCCCCcchhhhhccchhHHHHhhhhhhccCCceeeccccCCCCCcccc--------c-hhcccccccchhhh
Confidence 488999999887654432 2222222 23578888887754432211 0 11222333222222
Q ss_pred h-------------CCC-CceEEEEecccchH-HHHHHHHhCcCccceeEEEcC
Q 022534 104 L-------------EVK-YPFFLVVQGFLVGS-YGLTWALKNPSRISKLAILNS 142 (295)
Q Consensus 104 l-------------~~~-~~~~lv~~G~~~G~-~~~~~a~~~p~~v~~lil~~~ 142 (295)
- ..+ ..+.+. |+|+|+ +++.+|+++||++++++.+++
T Consensus 126 ~~~~~~~~~~~~~~~~d~~~~~i~--G~S~GG~~a~~~a~~~pd~f~a~~~~sg 177 (273)
T d1wb4a1 126 KYSTYAESTTPQGIAASRMHRGFG--GFAMGGLTTWYVMVNCLDYVAYFMPLSG 177 (273)
T ss_dssp HSCCSCSSCSHHHHHTTGGGEEEE--EETHHHHHHHHHHHHHTTTCCEEEEESC
T ss_pred hhhhhhhhhhhhcccCCccceEEE--eeCCcchhhhhhhhcCCCcceEEEEeCc
Confidence 1 111 123443 777765 567788899999999888753
|
| >d2d81a1 c.69.1.37 (A:21-338) Polyhydroxybutyrate depolymerase {Penicillium funiculosum [TaxId: 28572]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: PHB depolymerase-like domain: Polyhydroxybutyrate depolymerase species: Penicillium funiculosum [TaxId: 28572]
Probab=97.00 E-value=0.0023 Score=53.03 Aligned_cols=45 Identities=18% Similarity=0.146 Sum_probs=36.0
Q ss_pred CCcEEEEEeCCCCCCCcchHHHHHhcCC-----CCeEEEEecCCCCCCCC
Q 022534 233 DKPVLVAWGISDKYLPQSVAEEFQKGNP-----NVVKLQMIEGAGHMPQE 277 (295)
Q Consensus 233 ~~P~l~i~G~~D~~~~~~~~~~~~~~~~-----~~~~~~~i~~~gH~~~~ 277 (295)
+.|+++++|++|..+++..++++.+.+. ..++++..+++||-...
T Consensus 90 ~~pvll~hG~~D~~Vpp~~s~~l~~~l~~~~~~~~v~yv~~~gagH~fpT 139 (318)
T d2d81a1 90 QRKIYMWTGSSDTTVGPNVMNQLKAQLGNFDNSANVSYVTTTGAVHTFPT 139 (318)
T ss_dssp GCEEEEEEETTCCSSCHHHHHHHHHHHTTTSCGGGEEEEEETTCCSSEEE
T ss_pred CCCEEEEecCCCCCcCHHHHHHHHHHHHcCcCCCceEEEEeCCCCCCCCC
Confidence 5899999999999999998887766432 23677899999996543
|
| >d1ac5a_ c.69.1.5 (A:) Serine carboxypeptidase II {Baker's yeast (Saccharomyces cerevisiae), kex1(delta)p [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Serine carboxypeptidase-like domain: Serine carboxypeptidase II species: Baker's yeast (Saccharomyces cerevisiae), kex1(delta)p [TaxId: 4932]
Probab=96.10 E-value=0.0023 Score=56.29 Aligned_cols=61 Identities=10% Similarity=-0.049 Sum_probs=50.7
Q ss_pred CCcEEEEEeCCCCCCCcchHHHHHhcCC------------------------------------CCeEEEEecCCCCCCC
Q 022534 233 DKPVLVAWGISDKYLPQSVAEEFQKGNP------------------------------------NVVKLQMIEGAGHMPQ 276 (295)
Q Consensus 233 ~~P~l~i~G~~D~~~~~~~~~~~~~~~~------------------------------------~~~~~~~i~~~gH~~~ 276 (295)
++++|+..|+.|-+|+....+.+.+.+. ++.+++.+.+|||+++
T Consensus 372 girVLIy~Gd~D~icn~~Gte~~i~~L~w~g~~~f~~~~~~~~w~~~~~~~~~~~~vaG~~~~~~nltf~~V~~AGHmvP 451 (483)
T d1ac5a_ 372 GIEIVLFNGDKDLICNNKGVLDTIDNLKWGGIKGFSDDAVSFDWIHKSKSTDDSEEFSGYVKYDRNLTFVSVYNASHMVP 451 (483)
T ss_dssp TCEEEEEEETTCSTTCHHHHHHHHHHCEETTEESSCTTCEEEEEEECSSTTCCCCSCCEEEEEETTEEEEEETTCCSSHH
T ss_pred CCEEEEEECChhhcCCCHHHHHHHHhCCCccccccccCccccccccccccccCCcEEEEEEEEeCCeEEEEECCccccCc
Confidence 4899999999999998877666543321 1268899999999999
Q ss_pred CCChHHHHHHHHHHHHh
Q 022534 277 EDWPEKVVDGLRYFFLN 293 (295)
Q Consensus 277 ~e~p~~~~~~i~~fl~~ 293 (295)
.++|.+..+.|+.|+.+
T Consensus 452 ~dqP~~a~~mi~~fl~~ 468 (483)
T d1ac5a_ 452 FDKSLVSRGIVDIYSND 468 (483)
T ss_dssp HHCHHHHHHHHHHHTTC
T ss_pred ccCHHHHHHHHHHHhCC
Confidence 99999999999999975
|
| >d1qe3a_ c.69.1.1 (A:) Thermophilic para-nitrobenzyl esterase (PNB esterase) {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetylcholinesterase-like domain: Thermophilic para-nitrobenzyl esterase (PNB esterase) species: Bacillus subtilis [TaxId: 1423]
Probab=95.27 E-value=0.061 Score=46.53 Aligned_cols=110 Identities=11% Similarity=0.087 Sum_probs=57.0
Q ss_pred CCCCceEEEEcCCC---CCCccchh-hHHHhhhCCCeEEEeCCC----CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
Q 022534 32 DSRLGTIVFLHGAP---SHSYSYRN-VMSQMSDAGFHCFAPDWL----GFGFSDKPEKGYDDFDFTENEFHEELDKLLDV 103 (295)
Q Consensus 32 ~~~~~~vv~lHG~~---~~~~~w~~-~~~~l~~~~~~via~Dl~----G~G~S~~~~~~~~~~~~~~~~~~~~l~~~~~~ 103 (295)
..+.|++|+|||.+ ++...+.. .....++.+.=||++..| ||=.+....... ..+|.+.|+...|.-+-+.
T Consensus 93 ~~~lPV~v~ihGG~~~~g~~~~~~~~~~~~~~~~~vVvV~~nYRlg~~GFl~~~~~~~~~-~gN~Gl~Dq~~AL~WV~~n 171 (483)
T d1qe3a_ 93 SQNLPVMVWIHGGAFYLGAGSEPLYDGSKLAAQGEVIVVTLNYRLGPFGFLHLSSFDEAY-SDNLGLLDQAAALKWVREN 171 (483)
T ss_dssp CCSEEEEEEECCSTTTSCCTTSGGGCCHHHHHHHTCEEEEECCCCHHHHSCCCTTTCTTS-CSCHHHHHHHHHHHHHHHH
T ss_pred CCCCceEEEEeecccccCCccccccccccccccCceEEEeecccccchhhcccccccccc-ccccccHHHHHHHHHHHHH
Confidence 34468999999975 23333222 223333446888988887 342211111111 2245566665555544443
Q ss_pred ---hCC-CCceEEEEecccchHHHHHHHH---hCcCccceeEEEcCCC
Q 022534 104 ---LEV-KYPFFLVVQGFLVGSYGLTWAL---KNPSRISKLAILNSPL 144 (295)
Q Consensus 104 ---l~~-~~~~~lv~~G~~~G~~~~~~a~---~~p~~v~~lil~~~p~ 144 (295)
.|- .+.+.|+ |+|.|+....+-+ .....+.+.|+.+.+.
T Consensus 172 I~~FGGDp~~VTl~--G~SAGa~sv~~~l~sp~~~gLF~raI~~SGs~ 217 (483)
T d1qe3a_ 172 ISAFGGDPDNVTVF--GESAGGMSIAALLAMPAAKGLFQKAIMESGAS 217 (483)
T ss_dssp GGGGTEEEEEEEEE--EETHHHHHHHHHTTCGGGTTSCSEEEEESCCC
T ss_pred HHHcCCCcccceee--ccccccchhhhhhcccccCCcceeeccccCCc
Confidence 332 2346776 6666643322222 2234788888886543
|
| >d2ha2a1 c.69.1.1 (A:1-542) Acetylcholinesterase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetylcholinesterase-like domain: Acetylcholinesterase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=94.60 E-value=0.072 Score=46.77 Aligned_cols=108 Identities=9% Similarity=-0.016 Sum_probs=56.7
Q ss_pred CCCceEEEEcCCC---CCCccchhhHHHh-hhCCCeEEEeCCC----CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH-
Q 022534 33 SRLGTIVFLHGAP---SHSYSYRNVMSQM-SDAGFHCFAPDWL----GFGFSDKPEKGYDDFDFTENEFHEELDKLLDV- 103 (295)
Q Consensus 33 ~~~~~vv~lHG~~---~~~~~w~~~~~~l-~~~~~~via~Dl~----G~G~S~~~~~~~~~~~~~~~~~~~~l~~~~~~- 103 (295)
.+.|++|+|||.+ ++......--..+ +..+.-|+++..| ||=.+.... .. ..++.+.|+...|.-+-+.
T Consensus 110 ~~lPV~v~ihGG~~~~gs~~~~~~~~~~~~~~~~vvvVt~nYRlg~~Gfl~~~~~~-~~-~gN~Gl~Dq~~AL~WV~~nI 187 (542)
T d2ha2a1 110 SPTPVLIWIYGGGFYSGAASLDVYDGRFLAQVEGAVLVSMNYRVGTFGFLALPGSR-EA-PGNVGLLDQRLALQWVQENI 187 (542)
T ss_dssp SCEEEEEEECCSTTTCCCTTSGGGCTHHHHHHHCCEEEEECCCCHHHHHCCCTTCS-SC-CSCHHHHHHHHHHHHHHHHG
T ss_pred CCCcEEEEEEECccccccCcccccCchhhhhhccceeEeeeeeccceeeecccccc-cC-CCcCCcccHHHHHHHHHHHH
Confidence 3458999999964 2232221111223 3347889999999 664433211 11 2244566665555544433
Q ss_pred --hCC-CCceEEEEecccchHHHH--HHHH-hCcCccceeEEEcCCC
Q 022534 104 --LEV-KYPFFLVVQGFLVGSYGL--TWAL-KNPSRISKLAILNSPL 144 (295)
Q Consensus 104 --l~~-~~~~~lv~~G~~~G~~~~--~~a~-~~p~~v~~lil~~~p~ 144 (295)
+|- .+.|+|+ |+|.|+... ++.. .-...+.+.|+.+...
T Consensus 188 ~~FGGDP~~VTi~--G~SAGa~sv~~ll~sp~~~~LF~~aI~~SG~~ 232 (542)
T d2ha2a1 188 AAFGGDPMSVTLF--GESAGAASVGMHILSLPSRSLFHRAVLQSGTP 232 (542)
T ss_dssp GGGTEEEEEEEEE--EETHHHHHHHHHHHSHHHHTTCSEEEEESCCS
T ss_pred HHhhcCccccccc--cccccccchhhhhhhhhhhHHhhhheeecccc
Confidence 432 2346776 566664322 2221 1224688888876543
|
| >d2h7ca1 c.69.1.1 (A:1021-1553) Mammalian carboxylesterase (liver carboxylesterase I) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetylcholinesterase-like domain: Mammalian carboxylesterase (liver carboxylesterase I) species: Human (Homo sapiens) [TaxId: 9606]
Probab=94.57 E-value=0.083 Score=46.19 Aligned_cols=105 Identities=11% Similarity=0.116 Sum_probs=57.0
Q ss_pred CCCceEEEEcCCC---CCCccchhhHHHhhhCCCeEEEeCCC----CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH--
Q 022534 33 SRLGTIVFLHGAP---SHSYSYRNVMSQMSDAGFHCFAPDWL----GFGFSDKPEKGYDDFDFTENEFHEELDKLLDV-- 103 (295)
Q Consensus 33 ~~~~~vv~lHG~~---~~~~~w~~~~~~l~~~~~~via~Dl~----G~G~S~~~~~~~~~~~~~~~~~~~~l~~~~~~-- 103 (295)
.+.|++|+|||++ ++...|.. ....+..+.=||++..| ||-.+..... ..++.+.|+...|.-+-+.
T Consensus 111 ~~lPV~v~ihGG~~~~gs~~~~~~-~~~~~~~~vIvVt~nYRLg~~GFl~~~~~~~---~gN~Gl~Dq~~AL~WV~~nI~ 186 (532)
T d2h7ca1 111 NRLPVMVWIHGGGLMVGAASTYDG-LALAAHENVVVVTIQYRLGIWGFFSTGDEHS---RGNWGHLDQVAALRWVQDNIA 186 (532)
T ss_dssp CCEEEEEEECCSTTTSCCSTTSCC-HHHHHHHTCEEEEECCCCHHHHHCCCSSTTC---CCCHHHHHHHHHHHHHHHHGG
T ss_pred CCcEEEEEEeCCcccccccccCCc-hhhhhcCceEEEEEeeccCCCcccccccccc---ccccccHHHHHHHHHHHHHHH
Confidence 3358999999974 34444432 23334457889999987 3433332211 1245566665555444443
Q ss_pred -hCCC-CceEEEEecccchHH--HHHHHH-hCcCccceeEEEcCC
Q 022534 104 -LEVK-YPFFLVVQGFLVGSY--GLTWAL-KNPSRISKLAILNSP 143 (295)
Q Consensus 104 -l~~~-~~~~lv~~G~~~G~~--~~~~a~-~~p~~v~~lil~~~p 143 (295)
+|-+ ..+.|+ |+|.|+. ..+++. .....+.+.|+.+..
T Consensus 187 ~FGGDp~~VTl~--G~SAGa~sv~~~l~sp~~~~LF~raI~~SG~ 229 (532)
T d2h7ca1 187 SFGGNPGSVTIF--GESAGGESVSVLVLSPLAKNLFHRAISESGV 229 (532)
T ss_dssp GGTEEEEEEEEE--EETHHHHHHHHHHHCGGGTTSCSEEEEESCC
T ss_pred HhcCCcceeeee--ccccccchHHHHHhhhhccCcchhhhhhccc
Confidence 4322 346776 5666643 233322 233467888887643
|
| >d1ea5a_ c.69.1.1 (A:) Acetylcholinesterase {Pacific electric ray (Torpedo californica) [TaxId: 7787]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetylcholinesterase-like domain: Acetylcholinesterase species: Pacific electric ray (Torpedo californica) [TaxId: 7787]
Probab=94.36 E-value=0.11 Score=45.40 Aligned_cols=109 Identities=10% Similarity=0.017 Sum_probs=56.5
Q ss_pred CCCceEEEEcCCC---CCC-ccchhhHHHhhhCCCeEEEeCCC----CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh
Q 022534 33 SRLGTIVFLHGAP---SHS-YSYRNVMSQMSDAGFHCFAPDWL----GFGFSDKPEKGYDDFDFTENEFHEELDKLLDVL 104 (295)
Q Consensus 33 ~~~~~vv~lHG~~---~~~-~~w~~~~~~l~~~~~~via~Dl~----G~G~S~~~~~~~~~~~~~~~~~~~~l~~~~~~l 104 (295)
...|++|+|||.+ ++. ..+......++..+.=||.+..| ||-.++... .. .-++.+.|+...|.-+-+.+
T Consensus 104 ~~lPV~v~ihGG~~~~g~~~~~~~~~~~~~~~~~vvvVt~nYRlg~~GFl~~~~~~-~~-~gN~Gl~Dq~~AL~WV~~nI 181 (532)
T d1ea5a_ 104 KSTTVMVWIYGGGFYSGSSTLDVYNGKYLAYTEEVVLVSLSYRVGAFGFLALHGSQ-EA-PGNVGLLDQRMALQWVHDNI 181 (532)
T ss_dssp SSEEEEEEECCSTTTCCCTTCGGGCTHHHHHHHTCEEEECCCCCHHHHHCCCTTCS-SS-CSCHHHHHHHHHHHHHHHHG
T ss_pred CCCcEEEEEEcCCcccccCCccccCcchhhcccCccEEEEeecccccccccccccc-CC-CCcccchhHHHHHHHHHHHH
Confidence 3469999999964 222 22222222233447888888887 343332111 11 22445666665555444443
Q ss_pred ---CC-CCceEEEEecccchHH--HHHHHH-hCcCccceeEEEcCCCC
Q 022534 105 ---EV-KYPFFLVVQGFLVGSY--GLTWAL-KNPSRISKLAILNSPLT 145 (295)
Q Consensus 105 ---~~-~~~~~lv~~G~~~G~~--~~~~a~-~~p~~v~~lil~~~p~~ 145 (295)
|- ...+.|+ |+|.|+. ..++.. .-...+.+.|+.+.+..
T Consensus 182 ~~FGGDp~~VTl~--G~SAGa~sv~~~~~sp~~~~lF~~aI~~Sg~~~ 227 (532)
T d1ea5a_ 182 QFFGGDPKTVTIF--GESAGGASVGMHILSPGSRDLFRRAILQSGSPN 227 (532)
T ss_dssp GGGTEEEEEEEEE--EETHHHHHHHHHHHCHHHHTTCSEEEEESCCTT
T ss_pred HhhcCCccceEee--eecccccchhhhccCccchhhhhhheeeccccc
Confidence 32 2346776 5666643 222222 22346888888765443
|
| >d1thga_ c.69.1.17 (A:) Type-B carboxylesterase/lipase {Fungus (Geotrichum candidum), ATCC 34614 [TaxId: 27317]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Type-B carboxylesterase/lipase species: Fungus (Geotrichum candidum), ATCC 34614 [TaxId: 27317]
Probab=93.60 E-value=0.062 Score=47.39 Aligned_cols=108 Identities=11% Similarity=0.125 Sum_probs=56.5
Q ss_pred CCCceEEEEcCCC---CCCccc--hhhH-HHhh-hCCCeEEEeCCC----CCCCCCCCCCCCCCCCCCHHHHHHHHHHHH
Q 022534 33 SRLGTIVFLHGAP---SHSYSY--RNVM-SQMS-DAGFHCFAPDWL----GFGFSDKPEKGYDDFDFTENEFHEELDKLL 101 (295)
Q Consensus 33 ~~~~~vv~lHG~~---~~~~~w--~~~~-~~l~-~~~~~via~Dl~----G~G~S~~~~~~~~~~~~~~~~~~~~l~~~~ 101 (295)
.+.|++|+|||.+ ++...| ..+. ..++ ..+.=||++..| ||-.+....... ..++.+.|+...|.-+-
T Consensus 120 ~~lPV~V~ihGG~f~~G~~~~~~~~~~~~~~~~~~~~vIvVt~nYRlg~~Gfl~~~~~~~~~-~gN~Gl~Dq~~AL~WV~ 198 (544)
T d1thga_ 120 AKLPVMVWIYGGAFVYGSSAAYPGNSYVKESINMGQPVVFVSINYRTGPFGFLGGDAITAEG-NTNAGLHDQRKGLEWVS 198 (544)
T ss_dssp CCEEEEEEECCCTTCCSGGGGCCSHHHHHHHHHTTCCCEEEEECCCCHHHHHCCSHHHHHHT-CTTHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeccCCCccCCCccCCcchhhhhhhhccCCeEEEecccccccccccCCchhhccc-cccHHHHHhhhhhhhhh
Confidence 3468999999975 233333 2222 2243 347889999998 444332100000 11445666655555444
Q ss_pred HHh---CC-CCceEEEEecccchHH--HHHHHHh-------CcCccceeEEEcCC
Q 022534 102 DVL---EV-KYPFFLVVQGFLVGSY--GLTWALK-------NPSRISKLAILNSP 143 (295)
Q Consensus 102 ~~l---~~-~~~~~lv~~G~~~G~~--~~~~a~~-------~p~~v~~lil~~~p 143 (295)
+.+ |- .+.+.|+ |+|.|+. +++++.- -...+.+.|+.+..
T Consensus 199 ~nI~~FGGDp~~VTl~--G~SaGa~~v~~~l~sp~~~~~~~s~gLF~raI~qSG~ 251 (544)
T d1thga_ 199 DNIANFGGDPDKVMIF--GESAGAMSVAHQLIAYGGDNTYNGKKLFHSAILQSGG 251 (544)
T ss_dssp HHGGGGTEEEEEEEEE--EETHHHHHHHHHHHGGGTCCEETTEESCSEEEEESCC
T ss_pred hhhcccccCCCceEee--eeccchHHHHHHHhCcCCCcccchhhhhccccccccc
Confidence 433 32 2347776 5565543 3332221 12478888888653
|
| >d1p0ia_ c.69.1.1 (A:) Butyryl cholinesterase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetylcholinesterase-like domain: Butyryl cholinesterase species: Human (Homo sapiens) [TaxId: 9606]
Probab=93.47 E-value=0.28 Score=42.64 Aligned_cols=120 Identities=11% Similarity=0.021 Sum_probs=59.6
Q ss_pred EEEEEEEcCCCCCCCceEEEEcCCC---CCCccchhhHHHh-hhCCCeEEEeCCC----CCCCCC-CCCCCCCCCCCCHH
Q 022534 21 YRWFVRETGSADSRLGTIVFLHGAP---SHSYSYRNVMSQM-SDAGFHCFAPDWL----GFGFSD-KPEKGYDDFDFTEN 91 (295)
Q Consensus 21 ~~~~~~~~g~~~~~~~~vv~lHG~~---~~~~~w~~~~~~l-~~~~~~via~Dl~----G~G~S~-~~~~~~~~~~~~~~ 91 (295)
..+++........+.|++|+|||.+ ++......-...+ ++.+.=||.+..| ||-.++ .... .-++.+.
T Consensus 90 L~lnI~~P~~~~~~~PV~v~ihGG~~~~gs~~~~~~~~~~~~~~~~vVvVt~nYRlg~~Gfl~~~~~~~~---~gN~Gl~ 166 (526)
T d1p0ia_ 90 LYLNVWIPAPKPKNATVLIWIYGGGFQTGTSSLHVYDGKFLARVERVIVVSMNYRVGALGFLALPGNPEA---PGNMGLF 166 (526)
T ss_dssp CEEEEEEESSCCSSEEEEEEECCSTTTSCCTTCGGGCTHHHHHHHCCEEEEECCCCHHHHHCCCTTCTTS---CSCHHHH
T ss_pred CEEEEEeCCCCCCCCceEEEEECCCcccccCcccccCccccccccceeEEecccccccccccCCCCcccc---ccccccc
Confidence 3444433333333468999999975 2333222222223 2347888888887 232221 1111 1244566
Q ss_pred HHHHHHHHHHHH---hCC-CCceEEEEecccchHH--HHHHHH-hCcCccceeEEEcCCCC
Q 022534 92 EFHEELDKLLDV---LEV-KYPFFLVVQGFLVGSY--GLTWAL-KNPSRISKLAILNSPLT 145 (295)
Q Consensus 92 ~~~~~l~~~~~~---l~~-~~~~~lv~~G~~~G~~--~~~~a~-~~p~~v~~lil~~~p~~ 145 (295)
|+...|.-+-+. .|- ...+.|+ |+|.|+. ..+++. .....+.+.|+.+.+..
T Consensus 167 Dq~~AL~WV~~nI~~FGGDp~~VTl~--G~SAGa~sv~~~~~sp~~~~lf~~aI~~Sg~~~ 225 (526)
T d1p0ia_ 167 DQQLALQWVQKNIAAFGGNPKSVTLF--GESAGAASVSLHLLSPGSHSLFTRAILQSGSFN 225 (526)
T ss_dssp HHHHHHHHHHHHGGGGTEEEEEEEEE--EETHHHHHHHHHHHCGGGGGGCSEEEEESCCTT
T ss_pred chhhhhhhHHHHHHHhhcCchheeeh--hhccccceeeccccCCcchhhhhhhhccccccc
Confidence 665555544343 332 2347776 5566543 223222 23346777877765543
|
| >d1ukca_ c.69.1.17 (A:) Esterase EstA {Aspergillus niger [TaxId: 5061]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Esterase EstA species: Aspergillus niger [TaxId: 5061]
Probab=91.19 E-value=0.24 Score=43.11 Aligned_cols=110 Identities=13% Similarity=0.090 Sum_probs=56.2
Q ss_pred CCCceEEEEcCCC---CCCccchhhHHHhh-hCCCeEEEeCCCC----CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh
Q 022534 33 SRLGTIVFLHGAP---SHSYSYRNVMSQMS-DAGFHCFAPDWLG----FGFSDKPEKGYDDFDFTENEFHEELDKLLDVL 104 (295)
Q Consensus 33 ~~~~~vv~lHG~~---~~~~~w~~~~~~l~-~~~~~via~Dl~G----~G~S~~~~~~~~~~~~~~~~~~~~l~~~~~~l 104 (295)
.+.|++|+|||++ ++...|..-...++ ..+.=||.+..|= |=.+....... ..++.+.|+...|.-+-+.+
T Consensus 95 ~~~PV~v~ihGG~~~~G~~~~~~~~~~~~~~~~~vVvVt~nYRlg~~GFl~~~~~~~~~-~~N~Gl~Dq~~AL~WV~~nI 173 (517)
T d1ukca_ 95 SKLPVWLFIQGGGYAENSNANYNGTQVIQASDDVIVFVTFNYRVGALGFLASEKVRQNG-DLNAGLLDQRKALRWVKQYI 173 (517)
T ss_dssp CCEEEEEEECCSTTTSCCSCSCCCHHHHHHTTSCCEEEEECCCCHHHHHCCCHHHHHSS-CTTHHHHHHHHHHHHHHHHG
T ss_pred CCceEEEEEcCCccccCCCccccchhhhhhhccccceEEEEecccceeecCcccccccc-ccchhHHHHHHHHHHHHHHH
Confidence 3458999999974 34444443222232 3356788888882 22221100000 11345666655555544443
Q ss_pred ---CC-CCceEEEEecccchHH--HHHHHHh---CcCccceeEEEcCCCC
Q 022534 105 ---EV-KYPFFLVVQGFLVGSY--GLTWALK---NPSRISKLAILNSPLT 145 (295)
Q Consensus 105 ---~~-~~~~~lv~~G~~~G~~--~~~~a~~---~p~~v~~lil~~~p~~ 145 (295)
|- .+.+.|+ |+|.|+. +.+++.- ....+.+.|+.+++..
T Consensus 174 ~~FGGDp~~VTl~--G~SAGa~sv~~~l~s~~~~~~gLF~raI~qSg~~~ 221 (517)
T d1ukca_ 174 EQFGGDPDHIVIH--GVSAGAGSVAYHLSAYGGKDEGLFIGAIVESSFWP 221 (517)
T ss_dssp GGGTEEEEEEEEE--EETHHHHHHHHHHTGGGTCCCSSCSEEEEESCCCC
T ss_pred HhhcCCccccccc--ccccchhhHHHHHhccccccccccceeeecccccc
Confidence 32 2347776 5666643 3333322 2247888988865443
|
| >d2bcea_ c.69.1.1 (A:) Bile-salt activated lipase (cholesterol esterase) {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetylcholinesterase-like domain: Bile-salt activated lipase (cholesterol esterase) species: Cow (Bos taurus) [TaxId: 9913]
Probab=89.91 E-value=0.53 Score=41.39 Aligned_cols=106 Identities=11% Similarity=0.062 Sum_probs=54.4
Q ss_pred CCceEEEEcCCC---CCCcc--c----hhhHHHhhh-CCCeEEEeCCC----CCCCCCCCCCCCCCCCCCHHHHHHHHHH
Q 022534 34 RLGTIVFLHGAP---SHSYS--Y----RNVMSQMSD-AGFHCFAPDWL----GFGFSDKPEKGYDDFDFTENEFHEELDK 99 (295)
Q Consensus 34 ~~~~vv~lHG~~---~~~~~--w----~~~~~~l~~-~~~~via~Dl~----G~G~S~~~~~~~~~~~~~~~~~~~~l~~ 99 (295)
+.|++|+|||.+ ++... + ..--..|+. .+.=||.+..| ||-.+..... .-+|.+.|+...|.-
T Consensus 97 ~lPV~V~iHGG~f~~Gs~~~~~~~~~~~~dg~~la~~~~vIvVt~nYRlg~~GFl~~~~~~~---~gN~Gl~Dq~~AL~W 173 (579)
T d2bcea_ 97 DLPVMIWIYGGAFLMGASQGANFLSNYLYDGEEIATRGNVIVVTFNYRVGPLGFLSTGDSNL---PGNYGLWDQHMAIAW 173 (579)
T ss_dssp SEEEEEECCCCSEEEC-------CTTGGGCCHHHHHHHTCEEEEECCCCHHHHHCCCSSTTC---CCCHHHHHHHHHHHH
T ss_pred CCcEEEEECCCcccCCCCCCcccCCccccchhhhhccCCEEEEeecccccccccccccccCC---CccchhhHHHHHHHH
Confidence 458999999974 22211 1 111123332 25778888887 4432222111 224566676655555
Q ss_pred HHHHh---CC-CCceEEEEecccchHH--HHHHHH-hCcCccceeEEEcCCC
Q 022534 100 LLDVL---EV-KYPFFLVVQGFLVGSY--GLTWAL-KNPSRISKLAILNSPL 144 (295)
Q Consensus 100 ~~~~l---~~-~~~~~lv~~G~~~G~~--~~~~a~-~~p~~v~~lil~~~p~ 144 (295)
+-+.+ |- .+.+.|+ |+|.|+. .++++. .....+.+.|+.+...
T Consensus 174 V~~nI~~FGGDP~~VTl~--G~SAGa~sv~~~l~sp~~~gLF~raI~~SGs~ 223 (579)
T d2bcea_ 174 VKRNIEAFGGDPDQITLF--GESAGGASVSLQTLSPYNKGLIKRAISQSGVG 223 (579)
T ss_dssp HHHHGGGGTEEEEEEEEE--EETHHHHHHHHHHHCGGGTTTCSEEEEESCCT
T ss_pred HhhhhhhhccCcCceEee--ecccccchhhhhhhhhcccCccccceeccCCc
Confidence 54443 32 2346776 5666643 333222 3345788888886543
|
| >d1dx4a_ c.69.1.1 (A:) Acetylcholinesterase {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetylcholinesterase-like domain: Acetylcholinesterase species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=89.60 E-value=0.4 Score=42.10 Aligned_cols=108 Identities=11% Similarity=-0.009 Sum_probs=53.3
Q ss_pred CCCceEEEEcCCC---CCCccchhhHHHhhhC-CCeEEEeCCC----CCCCC------CCCCCCCCCCCCCHHHHHHHHH
Q 022534 33 SRLGTIVFLHGAP---SHSYSYRNVMSQMSDA-GFHCFAPDWL----GFGFS------DKPEKGYDDFDFTENEFHEELD 98 (295)
Q Consensus 33 ~~~~~vv~lHG~~---~~~~~w~~~~~~l~~~-~~~via~Dl~----G~G~S------~~~~~~~~~~~~~~~~~~~~l~ 98 (295)
.+.|++|+|||.+ ++......-...|++. +.=||++..| ||=.. +... .. .-++.+.|+...|.
T Consensus 137 ~~lPV~V~ihGG~f~~Gs~~~~~~~~~~l~~~~~vVvVtinYRlg~fGFl~~~~~~~~~~~~-~~-~gN~Gl~Dq~~AL~ 214 (571)
T d1dx4a_ 137 NGLPILIWIYGGGFMTGSATLDIYNADIMAAVGNVIVASFQYRVGAFGFLHLAPEMPSEFAE-EA-PGNVGLWDQALAIR 214 (571)
T ss_dssp SSEEEEEEECCSTTTCCCTTCGGGCCHHHHHHHTCEEEEECCCCTHHHHCCCGGGSCGGGTT-SS-CSCHHHHHHHHHHH
T ss_pred CCCeEEEEEeCCCccCCCCcccccchhhhhhcCCeeEEeecceecccccccccccccccccc-CC-CCcccchHHHHHHH
Confidence 3468999999974 3333322222344432 4667788876 22211 1000 11 11445566655555
Q ss_pred HHHHHh---CC-CCceEEEEecccchHH--HHHHHH-hCcCccceeEEEcCCC
Q 022534 99 KLLDVL---EV-KYPFFLVVQGFLVGSY--GLTWAL-KNPSRISKLAILNSPL 144 (295)
Q Consensus 99 ~~~~~l---~~-~~~~~lv~~G~~~G~~--~~~~a~-~~p~~v~~lil~~~p~ 144 (295)
-+-+.+ |- .+.|.|+ |+|.|+. ..++.. .....+.+.|+.+...
T Consensus 215 WV~~nI~~FGGDP~~VTl~--G~SAGa~sv~~ll~sp~~~~lf~~aI~~Sg~~ 265 (571)
T d1dx4a_ 215 WLKDNAHAFGGNPEWMTLF--GESAGSSSVNAQLMSPVTRGLVKRGMMQSGTM 265 (571)
T ss_dssp HHHHSTGGGTEEEEEEEEE--EETHHHHHHHHHHHCTTTTTSCCEEEEESCCT
T ss_pred HHHHhhhhhccCCCceEec--cccCccceeeeeeccccccccccccceecccc
Confidence 444333 32 2347776 5666643 223322 2234677777775543
|
| >d1llfa_ c.69.1.17 (A:) Type-B carboxylesterase/lipase {Candida cylindracea, cholesterol esterase [TaxId: 44322]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Type-B carboxylesterase/lipase species: Candida cylindracea, cholesterol esterase [TaxId: 44322]
Probab=89.48 E-value=0.37 Score=41.98 Aligned_cols=109 Identities=9% Similarity=0.069 Sum_probs=55.7
Q ss_pred CCCceEEEEcCCC---CCCccch--hhHH-H-hhhCCCeEEEeCCC----CCCCCCCCCCCCCCCCCCHHHHHHHHHHHH
Q 022534 33 SRLGTIVFLHGAP---SHSYSYR--NVMS-Q-MSDAGFHCFAPDWL----GFGFSDKPEKGYDDFDFTENEFHEELDKLL 101 (295)
Q Consensus 33 ~~~~~vv~lHG~~---~~~~~w~--~~~~-~-l~~~~~~via~Dl~----G~G~S~~~~~~~~~~~~~~~~~~~~l~~~~ 101 (295)
++.|+||+|||.+ ++...|. .++. . +...+.=||++..| ||-.++...... .-++.+.|+...|.-+-
T Consensus 112 ~~~PVlv~ihGG~f~~g~~~~~~~~~~~~~~~~~~~~vIvVt~nYRLg~~GFl~~~~~~~~~-~gN~Gl~Dq~~AL~WV~ 190 (534)
T d1llfa_ 112 ANLPVMLWIFGGGFEIGSPTIFPPAQMVTKSVLMGKPIIHVAVNYRVASWGFLAGDDIKAEG-SGNAGLKDQRLGMQWVA 190 (534)
T ss_dssp CCEEEEEEECCSTTTSCCGGGSCCHHHHHHHHHTTCCCEEEEECCCCHHHHHCCSHHHHHHT-CTTHHHHHHHHHHHHHH
T ss_pred CCCeEEEEECCCccccCCCCCCCchhccchhhhccCCeEEEEeecCCCcccccCCccccccc-ccccchhHHHHHHHHHH
Confidence 4579999999975 2333332 3332 2 33457889999999 444332100000 11334556555444443
Q ss_pred HH---hCC-CCceEEEEecccchHH--HHHHHHhC----c---CccceeEEEcCCC
Q 022534 102 DV---LEV-KYPFFLVVQGFLVGSY--GLTWALKN----P---SRISKLAILNSPL 144 (295)
Q Consensus 102 ~~---l~~-~~~~~lv~~G~~~G~~--~~~~a~~~----p---~~v~~lil~~~p~ 144 (295)
+. +|- .+.+.|. |+|.|+. .+.+.... | ..+.+.|+.+.+.
T Consensus 191 ~nI~~FGGDp~~VTl~--G~SaGa~~v~~~l~~~~~~~sp~s~gLF~raI~qSGs~ 244 (534)
T d1llfa_ 191 DNIAGFGGDPSKVTIF--GESAGSMSVLCHLIWNDGDNTYKGKPLFRAGIMQSGAM 244 (534)
T ss_dssp HHGGGGTEEEEEEEEE--EETHHHHHHHHHHHGGGGCCEETTEESCSEEEEESCCS
T ss_pred hhhhhhccCCcceeee--eecchHHHHHHHHhccccccccchhhhhhhhhhccCcc
Confidence 33 332 2346676 6666643 23333211 1 2488888886543
|
| >d1ac5a_ c.69.1.5 (A:) Serine carboxypeptidase II {Baker's yeast (Saccharomyces cerevisiae), kex1(delta)p [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Serine carboxypeptidase-like domain: Serine carboxypeptidase II species: Baker's yeast (Saccharomyces cerevisiae), kex1(delta)p [TaxId: 4932]
Probab=85.70 E-value=3.7 Score=34.85 Aligned_cols=87 Identities=21% Similarity=0.284 Sum_probs=50.1
Q ss_pred CceEEEEcCCCCCCccchhhHHH-----------------hhhCCCeEEEeCCC-CCCCCCCCCCC-----CCCCCCCHH
Q 022534 35 LGTIVFLHGAPSHSYSYRNVMSQ-----------------MSDAGFHCFAPDWL-GFGFSDKPEKG-----YDDFDFTEN 91 (295)
Q Consensus 35 ~~~vv~lHG~~~~~~~w~~~~~~-----------------l~~~~~~via~Dl~-G~G~S~~~~~~-----~~~~~~~~~ 91 (295)
+|.+|+|-|+|+++..|-.+.+. |.+ -..++.+|+| |-|.|-..... ...+.-+.+
T Consensus 67 ~Pl~lWlnGGPGcSS~~g~f~E~GP~~v~~~~~l~~Np~SWn~-~an~lfIDqPvGvGfSy~~~~~~~~~~~~~~~~~~~ 145 (483)
T d1ac5a_ 67 RPLIIWLNGGPGCSSMDGALVESGPFRVNSDGKLYLNEGSWIS-KGDLLFIDQPTGTGFSVEQNKDEGKIDKNKFDEDLE 145 (483)
T ss_dssp CCEEEEECCTTTBCTHHHHHHSSSSEEECTTSCEEECTTCGGG-TSEEEEECCSTTSTTCSSCCSSGGGSCTTSSCCSHH
T ss_pred CCEEEEECCCCcHHHHHHHHHccCCeEECCCCceeeCCCcccc-cCCEEEEeCCCCcCeeecCCCCccccccccccCCHH
Confidence 48999999999988877544321 222 4689999985 99999542210 001112334
Q ss_pred HHHHHHHHHHHH----h-C-CCCceEEEEecccchHHH
Q 022534 92 EFHEELDKLLDV----L-E-VKYPFFLVVQGFLVGSYG 123 (295)
Q Consensus 92 ~~~~~l~~~~~~----l-~-~~~~~~lv~~G~~~G~~~ 123 (295)
+.+.++.++++. . . .+++++|.|-++ +|-++
T Consensus 146 ~~a~~~~~fl~~f~~~fp~~~~~~~yI~GESY-gG~Yv 182 (483)
T d1ac5a_ 146 DVTKHFMDFLENYFKIFPEDLTRKIILSGESY-AGQYI 182 (483)
T ss_dssp HHHHHHHHHHHHHHHHCTTGGGSEEEEEEEET-HHHHH
T ss_pred HHHHHHHHHHHHHHHhCcccccCCeEEeeccc-ccchH
Confidence 555555555544 2 1 245677764322 45443
|