Citrus Sinensis ID: 022556

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-----
MAPSTLTALAGEKTLNPSFVRFQDERPKVAYNEFSNEIPVISLAGIDDVGGKRAEICKKIVEACEDWGIFQVVDHGVDAKLISDMTRLATEFFALPPEEKLKFDMSGGKKGGFIVSSHLQGEVVKDWREIVTYFSFPKQSRDYSRWPDKPEGWMEVTKEYSDKLMGVACKLLEVLSEAMGLEKEALTKACVDMDQKIVVNYYPKCPQPDLTLGLKRHTDPGTITLLLQDQVGGLQATKDNGKTWITVQPIEGAFVVNLGDHGHVSIYANTALIFLFLFILFYCFCLNHDVVLSRL
cccccHHHHccccccccccccccccccccccccccccccEEEccccccccccHHHHHHHHHHHHHHccEEEEEcccccHHHHHHHHHHHHHHHcccHHHHHccccccccEEEEEEcccccccccccccEEEEcccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHccccEEEEEEcccccccccccccccccccccccEEEEccccccEEEEEcccccEEEEccccccEEEEcccccEEEEEEcccEEEccccccccccccEEEEccccc
ccccEEEHHcccccccHHcccccccccccccccccccccEEEccccccccHHHHHHHHHHHHHHHHcccEEEEcccccHHHHHHHHHHHHHHHcccHHHHHHHccccccccEEEEEEEEcccccccHHHHEEEEccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHcccccEEEEEEEcccccccccccEEEEcccccEEEEEEcccccEEEEEccccEEEEEcccccEEEEEcccHHEEEEEcHHHHHHHHHccccEcEEEEEEEEcccc
mapstltalagektlnpsfvrfqderpkvaynefsneipvislagiddvggKRAEICKKIVEACEDWGIFQVVDHGVDAKLISDMTRLATeffalppeeklkfdmsggkkggFIVSSHLQGEVVKDWREIVTYFsfpkqsrdysrwpdkpegwmEVTKEYSDKLMGVACKLLEVLSEAMGLEKEALTKACVDMDQKIvvnyypkcpqpdltlglkrhtdpgtITLLLQDQvgglqatkdngktwitvqPIEGAFVvnlgdhghvSIYANTALIFLFLFILFYCFCLnhdvvlsrl
mapstltalagektlnpsfvrfQDERPKVAYnefsneipvislAGIDDVGGKRAEICKKIVEACEDWGIFQVVDHGVDAKLISDMTRLATEFFALPPEEKLKFDMSGGKKGGFIVSSHLQGEVVKDWREIVTYfsfpkqsrdysrwpdkpegWMEVTKEYSDKLMGVACKLLEVLSEAMGLEKEALTKACVDMDQKIVVNYYPKCPQPDLTLGLKRHTDPGTITLLLQDQVGGLQATKDNGKTWITVQPIEGAFVVNLGDHGHVSIYANTALIFLFLFILFYCFCLNHDVVLSRL
MAPSTLTALAGEKTLNPSFVRFQDERPKVAYNEFSNEIPVISLAGIDDVGGKRAEICKKIVEACEDWGIFQVVDHGVDAKLISDMTRLATEFFALPPEEKLKFDMSGGKKGGFIVSSHLQGEVVKDWREIVTYFSFPKQSRDYSRWPDKPEGWMEVTKEYSDKLMGVACKLLEVLSEAMGLEKEALTKACVDMDQKIVVNYYPKCPQPDLTLGLKRHTDPGTITLLLQDQVGGLQATKDNGKTWITVQPIEGAFVVNLGDHGHVSIYANTAliflflfilfycfclNHDVVLSRL
******************FVRFQDERPKVAYNEFSNEIPVISLAGIDDVGGKRAEICKKIVEACEDWGIFQVVDHGVDAKLISDMTRLATEFFALPPEEKLKFDMSGGKKGGFIVSSHLQGEVVKDWREIVTYFSFPKQSRDYSRWPDKPEGWMEVTKEYSDKLMGVACKLLEVLSEAMGLEKEALTKACVDMDQKIVVNYYPKCPQPDLTLGLKRHTDPGTITLLLQDQVGGLQATKDNGKTWITVQPIEGAFVVNLGDHGHVSIYANTALIFLFLFILFYCFCLNHDVVL***
*APSTL******KTLNPSFVRFQD***********NEIPVISLAGIDDVGGKRAEICKKIVEACEDWGIFQVVDHGVDAKLISDMTRLATEFFALPPEEKLKFDMSGGKKGGFIVSSHLQGEVVKDWREIVTYFSFPKQSRDYSRWPDKPEGWMEVTKEYSDKLMGVACKLLEVLSEAMGLEKEALTKACVDMDQKIVVNYYPKCPQPDLTLGLKRHTDPGTITLLLQDQVGGLQATKDNGKTWITVQPIEGAFVVNLGDHGHVSIYANTALIFLFLFILFYCFCLNHDVVLS**
MAPSTLTALAGEKTLNPSFVRFQDERPKVAYNEFSNEIPVISLAGIDDVGGKRAEICKKIVEACEDWGIFQVVDHGVDAKLISDMTRLATEFFALPPEEKLKFDMSGGKKGGFIVSSHLQGEVVKDWREIVTYFSFPKQSRDYSRWPDKPEGWMEVTKEYSDKLMGVACKLLEVLSEAMGLEKEALTKACVDMDQKIVVNYYPKCPQPDLTLGLKRHTDPGTITLLLQDQVGGLQATKDNGKTWITVQPIEGAFVVNLGDHGHVSIYANTALIFLFLFILFYCFCLNHDVVLSRL
***STLTALAGEKTLNPSFVRFQDERPKVAYNEFSNEIPVISLAGIDDVGGKRAEICKKIVEACEDWGIFQVVDHGVDAKLISDMTRLATEFFALPPEEKLKFDMSGGKKGGFIVSSHLQGEVVKDWREIVTYFSFPKQSRDYSRWPDKPEGWMEVTKEYSDKLMGVACKLLEVLSEAMGLEKEALTKACVDMDQKIVVNYYPKCPQPDLTLGLKRHTDPGTITLLLQDQVGGLQATKDNGKTWITVQPIEGAFVVNLGDHGHVSIYANTALIFLFLFILFYCFCLNHDVVLSR*
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiii
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MAPSTLTALAGEKTLNPSFVRFQDERPKVAYNEFSNEIPVISLAGIDDVGGKRAEICKKIVEACEDWGIFQVVDHGVDAKLISDMTRLATEFFALPPEEKLKFDMSGGKKGGFIVSSHLQGEVVKDWREIVTYFSFPKQSRDYSRWPDKPEGWMEVTKEYSDKLMGVACKLLEVLSEAMGLEKEALTKACVDMDQKIVVNYYPKCPQPDLTLGLKRHTDPGTITLLLQDQVGGLQATKDNGKTWITVQPIEGAFVVNLGDHGHVSIYANTALIFLFLFILFYCFCLNHDVVLSRL
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query295 2.2.26 [Sep-21-2011]
Q9S818358 Naringenin,2-oxoglutarate yes no 0.891 0.734 0.847 1e-136
Q05965357 Naringenin,2-oxoglutarate N/A no 0.888 0.733 0.851 1e-136
Q07353369 Naringenin,2-oxoglutarate N/A no 0.891 0.712 0.847 1e-136
Q7XZQ7368 Flavanone 3-dioxygenase O N/A no 0.891 0.714 0.833 1e-133
Q06942364 Naringenin,2-oxoglutarate N/A no 0.894 0.725 0.833 1e-133
Q05964365 Naringenin,2-oxoglutarate N/A no 0.877 0.709 0.842 1e-130
P41090364 Naringenin,2-oxoglutarate yes no 0.891 0.722 0.818 1e-129
Q05963356 Naringenin,2-oxoglutarate N/A no 0.823 0.682 0.828 1e-120
Q7XZQ8365 Flavone synthase OS=Petro N/A no 0.891 0.720 0.746 1e-120
P28038377 Naringenin,2-oxoglutarate N/A no 0.850 0.665 0.754 1e-116
>sp|Q9S818|FL3H_ARATH Naringenin,2-oxoglutarate 3-dioxygenase OS=Arabidopsis thaliana GN=F3H PE=1 SV=1 Back     alignment and function desciption
 Score =  484 bits (1245), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 223/263 (84%), Positives = 246/263 (93%)

Query: 1   MAPSTLTALAGEKTLNPSFVRFQDERPKVAYNEFSNEIPVISLAGIDDVGGKRAEICKKI 60
           MAP TLT LAGE  LN  FVR +DERPKVAYN FS+EIPVISLAGIDDV GKR EIC++I
Sbjct: 1   MAPGTLTELAGESKLNSKFVRDEDERPKVAYNVFSDEIPVISLAGIDDVDGKRGEICRQI 60

Query: 61  VEACEDWGIFQVVDHGVDAKLISDMTRLATEFFALPPEEKLKFDMSGGKKGGFIVSSHLQ 120
           VEACE+WGIFQVVDHGVD  L++DMTRLA +FFALPPE+KL+FDMSGGKKGGFIVSSHLQ
Sbjct: 61  VEACENWGIFQVVDHGVDTNLVADMTRLARDFFALPPEDKLRFDMSGGKKGGFIVSSHLQ 120

Query: 121 GEVVKDWREIVTYFSFPKQSRDYSRWPDKPEGWMEVTKEYSDKLMGVACKLLEVLSEAMG 180
           GE V+DWREIVTYFS+P ++RDYSRWPDKPEGW++VT+EYS++LM +ACKLLEVLSEAMG
Sbjct: 121 GEAVQDWREIVTYFSYPVRNRDYSRWPDKPEGWVKVTEEYSERLMSLACKLLEVLSEAMG 180

Query: 181 LEKEALTKACVDMDQKIVVNYYPKCPQPDLTLGLKRHTDPGTITLLLQDQVGGLQATKDN 240
           LEKE+LT ACVDMDQKIVVNYYPKCPQPDLTLGLKRHTDPGTITLLLQDQVGGLQAT+DN
Sbjct: 181 LEKESLTNACVDMDQKIVVNYYPKCPQPDLTLGLKRHTDPGTITLLLQDQVGGLQATRDN 240

Query: 241 GKTWITVQPIEGAFVVNLGDHGH 263
           GKTWITVQP+EGAFVVNLGDHGH
Sbjct: 241 GKTWITVQPVEGAFVVNLGDHGH 263
Catalyzes the 3-beta-hydroxylation of 2S-flavanones to 2R,3R-dihydroflavonols which are intermediates in the biosynthesis of flavonols, anthocyanidins, catechins and proanthocyanidins in plants.
Arabidopsis thaliana (taxid: 3702)
EC: 1EC: .EC: 1EC: 4EC: .EC: 1EC: 1EC: .EC: 9
>sp|Q05965|FL3H_MATIN Naringenin,2-oxoglutarate 3-dioxygenase (Fragment) OS=Matthiola incana GN=FHT PE=2 SV=1 Back     alignment and function description
>sp|Q07353|FL3H_PETHY Naringenin,2-oxoglutarate 3-dioxygenase (Fragment) OS=Petunia hybrida GN=AN3 PE=1 SV=1 Back     alignment and function description
>sp|Q7XZQ7|FL3H_PETCR Flavanone 3-dioxygenase OS=Petroselinum crispum GN=FHT PE=1 SV=1 Back     alignment and function description
>sp|Q06942|FL3H_MALDO Naringenin,2-oxoglutarate 3-dioxygenase OS=Malus domestica PE=2 SV=1 Back     alignment and function description
>sp|Q05964|FL3H_DIACA Naringenin,2-oxoglutarate 3-dioxygenase OS=Dianthus caryophyllus GN=FHT PE=2 SV=1 Back     alignment and function description
>sp|P41090|FL3H_VITVI Naringenin,2-oxoglutarate 3-dioxygenase OS=Vitis vinifera GN=F3H PE=2 SV=1 Back     alignment and function description
>sp|Q05963|FL3H_CALCH Naringenin,2-oxoglutarate 3-dioxygenase OS=Callistephus chinensis GN=FHT PE=2 SV=1 Back     alignment and function description
>sp|Q7XZQ8|FNSI_PETCR Flavone synthase OS=Petroselinum crispum GN=FNSI PE=1 SV=1 Back     alignment and function description
>sp|P28038|FL3H_HORVU Naringenin,2-oxoglutarate 3-dioxygenase OS=Hordeum vulgare PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query295
4126401362 flavanone 3-hydroxylase [Citrus sinensis 0.891 0.726 1.0 1e-154
284518920362 flavanone 3-hydroxylase [Citrus maxima] 0.891 0.726 0.988 1e-153
239633763362 flavanone 3-hydroxylase [Citrus maxima] 0.891 0.726 0.984 1e-153
134039064365 flavanone-3-hydroxylase [Dimocarpus long 0.891 0.720 0.897 1e-142
74273629368 gibberellin 20-oxidase 1 [Gossypium hirs 0.891 0.714 0.893 1e-140
121755803368 flavanone-3-hydroxylase [Gossypium hirsu 0.891 0.714 0.889 1e-140
119657097368 F3H [Gossypium barbadense] gi|289470638| 0.891 0.714 0.889 1e-139
309951612363 flavanone 3-hydroxylase [Litchi chinensi 0.891 0.724 0.885 1e-139
346540239364 F3H [Canarium album] 0.884 0.717 0.888 1e-138
395760140363 flavanone 3-hydroxylase [Ampelopsis gros 0.891 0.724 0.863 1e-136
>gi|4126401|dbj|BAA36553.1| flavanone 3-hydroxylase [Citrus sinensis] Back     alignment and taxonomy information
 Score =  551 bits (1419), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 263/263 (100%), Positives = 263/263 (100%)

Query: 1   MAPSTLTALAGEKTLNPSFVRFQDERPKVAYNEFSNEIPVISLAGIDDVGGKRAEICKKI 60
           MAPSTLTALAGEKTLNPSFVRFQDERPKVAYNEFSNEIPVISLAGIDDVGGKRAEICKKI
Sbjct: 1   MAPSTLTALAGEKTLNPSFVRFQDERPKVAYNEFSNEIPVISLAGIDDVGGKRAEICKKI 60

Query: 61  VEACEDWGIFQVVDHGVDAKLISDMTRLATEFFALPPEEKLKFDMSGGKKGGFIVSSHLQ 120
           VEACEDWGIFQVVDHGVDAKLISDMTRLATEFFALPPEEKLKFDMSGGKKGGFIVSSHLQ
Sbjct: 61  VEACEDWGIFQVVDHGVDAKLISDMTRLATEFFALPPEEKLKFDMSGGKKGGFIVSSHLQ 120

Query: 121 GEVVKDWREIVTYFSFPKQSRDYSRWPDKPEGWMEVTKEYSDKLMGVACKLLEVLSEAMG 180
           GEVVKDWREIVTYFSFPKQSRDYSRWPDKPEGWMEVTKEYSDKLMGVACKLLEVLSEAMG
Sbjct: 121 GEVVKDWREIVTYFSFPKQSRDYSRWPDKPEGWMEVTKEYSDKLMGVACKLLEVLSEAMG 180

Query: 181 LEKEALTKACVDMDQKIVVNYYPKCPQPDLTLGLKRHTDPGTITLLLQDQVGGLQATKDN 240
           LEKEALTKACVDMDQKIVVNYYPKCPQPDLTLGLKRHTDPGTITLLLQDQVGGLQATKDN
Sbjct: 181 LEKEALTKACVDMDQKIVVNYYPKCPQPDLTLGLKRHTDPGTITLLLQDQVGGLQATKDN 240

Query: 241 GKTWITVQPIEGAFVVNLGDHGH 263
           GKTWITVQPIEGAFVVNLGDHGH
Sbjct: 241 GKTWITVQPIEGAFVVNLGDHGH 263

Source: Citrus sinensis

Species: Citrus sinensis

Genus: Citrus

Family: Rutaceae

Order: Sapindales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|284518920|gb|ADB92595.1| flavanone 3-hydroxylase [Citrus maxima] Back     alignment and taxonomy information
>gi|239633763|gb|ACR77526.1| flavanone 3-hydroxylase [Citrus maxima] Back     alignment and taxonomy information
>gi|134039064|gb|ABO48521.1| flavanone-3-hydroxylase [Dimocarpus longan] Back     alignment and taxonomy information
>gi|74273629|gb|ABA01482.1| gibberellin 20-oxidase 1 [Gossypium hirsutum] Back     alignment and taxonomy information
>gi|121755803|gb|ABM64799.1| flavanone-3-hydroxylase [Gossypium hirsutum] Back     alignment and taxonomy information
>gi|119657097|gb|ABL86673.1| F3H [Gossypium barbadense] gi|289470638|gb|ADC96713.1| flavanone-3-hydroxylase [Gossypium hirsutum] Back     alignment and taxonomy information
>gi|309951612|gb|ADO95201.1| flavanone 3-hydroxylase [Litchi chinensis] Back     alignment and taxonomy information
>gi|346540239|gb|AEO36935.1| F3H [Canarium album] Back     alignment and taxonomy information
>gi|395760140|gb|AFN70721.1| flavanone 3-hydroxylase [Ampelopsis grossedentata] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query295
TAIR|locus:2081008358 F3H "flavanone 3-hydroxylase" 0.891 0.734 0.847 4.9e-124
TAIR|locus:2127686348 AT4G10490 [Arabidopsis thalian 0.820 0.695 0.384 1.6e-40
TAIR|locus:2127691349 AT4G10500 [Arabidopsis thalian 0.820 0.693 0.373 4.2e-40
TAIR|locus:2153924341 DMR6 "DOWNY MILDEW RESISTANT 6 0.854 0.739 0.354 5.3e-40
TAIR|locus:2085864352 AT3G19000 [Arabidopsis thalian 0.827 0.693 0.344 2.6e-38
TAIR|locus:2042942353 AT2G38240 [Arabidopsis thalian 0.827 0.691 0.355 1e-36
TAIR|locus:2169697371 AT5G05600 [Arabidopsis thalian 0.881 0.700 0.352 1.7e-36
TAIR|locus:2089428364 LBO1 "LATERAL BRANCHING OXIDOR 0.810 0.656 0.348 3.5e-36
TAIR|locus:2202980356 AT1G78550 [Arabidopsis thalian 0.827 0.685 0.345 4.4e-36
TAIR|locus:2127218356 LDOX "leucoanthocyanidin dioxy 0.745 0.617 0.336 3.1e-35
TAIR|locus:2081008 F3H "flavanone 3-hydroxylase" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1219 (434.2 bits), Expect = 4.9e-124, P = 4.9e-124
 Identities = 223/263 (84%), Positives = 246/263 (93%)

Query:     1 MAPSTLTALAGEKTLNPSFVRFQDERPKVAYNEFSNEIPVISLAGIDDVGGKRAEICKKI 60
             MAP TLT LAGE  LN  FVR +DERPKVAYN FS+EIPVISLAGIDDV GKR EIC++I
Sbjct:     1 MAPGTLTELAGESKLNSKFVRDEDERPKVAYNVFSDEIPVISLAGIDDVDGKRGEICRQI 60

Query:    61 VEACEDWGIFQVVDHGVDAKLISDMTRLATEFFALPPEEKLKFDMSGGKKGGFIVSSHLQ 120
             VEACE+WGIFQVVDHGVD  L++DMTRLA +FFALPPE+KL+FDMSGGKKGGFIVSSHLQ
Sbjct:    61 VEACENWGIFQVVDHGVDTNLVADMTRLARDFFALPPEDKLRFDMSGGKKGGFIVSSHLQ 120

Query:   121 GEVVKDWREIVTYFSFPKQSRDYSRWPDKPEGWMEVTKEYSDKLMGVACKLLEVLSEAMG 180
             GE V+DWREIVTYFS+P ++RDYSRWPDKPEGW++VT+EYS++LM +ACKLLEVLSEAMG
Sbjct:   121 GEAVQDWREIVTYFSYPVRNRDYSRWPDKPEGWVKVTEEYSERLMSLACKLLEVLSEAMG 180

Query:   181 LEKEALTKACVDMDQKIVVNYYPKCPQPDLTLGLKRHTDPGTITLLLQDQVGGLQATKDN 240
             LEKE+LT ACVDMDQKIVVNYYPKCPQPDLTLGLKRHTDPGTITLLLQDQVGGLQAT+DN
Sbjct:   181 LEKESLTNACVDMDQKIVVNYYPKCPQPDLTLGLKRHTDPGTITLLLQDQVGGLQATRDN 240

Query:   241 GKTWITVQPIEGAFVVNLGDHGH 263
             GKTWITVQP+EGAFVVNLGDHGH
Sbjct:   241 GKTWITVQPVEGAFVVNLGDHGH 263
GO:0005737 "cytoplasm" evidence=ISM
GO:0016491 "oxidoreductase activity" evidence=IEA
GO:0016706 "oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors" evidence=IEA
GO:0055114 "oxidation-reduction process" evidence=IEA
GO:0010224 "response to UV-B" evidence=RCA;IMP
GO:0009718 "anthocyanin-containing compound biosynthetic process" evidence=RCA
GO:0009744 "response to sucrose stimulus" evidence=RCA
GO:0009813 "flavonoid biosynthetic process" evidence=ISS;IMP;RCA
GO:0045486 "naringenin 3-dioxygenase activity" evidence=IMP
TAIR|locus:2127686 AT4G10490 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2127691 AT4G10500 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2153924 DMR6 "DOWNY MILDEW RESISTANT 6" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2085864 AT3G19000 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2042942 AT2G38240 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2169697 AT5G05600 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2089428 LBO1 "LATERAL BRANCHING OXIDOREDUCTASE 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2202980 AT1G78550 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2127218 LDOX "leucoanthocyanidin dioxygenase" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q7XZQ7FL3H_PETCR1, ., 1, 4, ., 1, 1, ., 90.83330.89150.7146N/Ano
Q7XZQ8FNSI_PETCR1, ., 1, 4, ., 1, 1, ., 2, 20.74620.89150.7205N/Ano
Q06942FL3H_MALDO1, ., 1, 4, ., 1, 1, ., 90.83390.89490.7252N/Ano
P28038FL3H_HORVU1, ., 1, 4, ., 1, 1, ., 90.75490.85080.6657N/Ano
Q9S818FL3H_ARATH1, ., 1, 4, ., 1, 1, ., 90.84790.89150.7346yesno
Q07353FL3H_PETHY1, ., 1, 4, ., 1, 1, ., 90.84790.89150.7127N/Ano
Q05965FL3H_MATIN1, ., 1, 4, ., 1, 1, ., 90.85110.88810.7338N/Ano
Q05964FL3H_DIACA1, ., 1, 4, ., 1, 1, ., 90.84290.87790.7095N/Ano
Q05963FL3H_CALCH1, ., 1, 4, ., 1, 1, ., 90.82850.82370.6825N/Ano
P41090FL3H_VITVI1, ., 1, 4, ., 1, 1, ., 90.81810.89150.7225yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer1.14.110.976
4th Layer1.14.11.90.991

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
F3H
RecName- Full=Naringenin,2-oxoglutarate 3-dioxygenase; EC=1.14.11.9; AltName- Full=Flavonone-3-hydroxylase; Short=F3H; AltName- Full=FHT;; Catalyzes the 3-beta-hydroxylation of 2S-flavanones to 2R,3R-dihydroflavonols which are intermediates in the biosynthesis of flavonols, anthocyanidins, catechins and proanthocyanidins in plants (363 aa)
(Vitis vinifera)
Predicted Functional Partners:
VvF3'h1
SubName- Full=Putative uncharacterized protein (Chromosome chr17 scaffold_12, whole genome shot [...] (509 aa)
     •• 0.925
VvF3'h3
SubName- Full=Chromosome chr17 scaffold_12, whole genome shotgun sequence; (509 aa)
     •• 0.925
FLS2
SubName- Full=Putative uncharacterized protein (Chromosome chr18 scaffold_1, whole genome shotg [...] (335 aa)
  •  •••0.913
ANS
SubName- Full=Anthocyanidin synthase (Chromosome chr2 scaffold_112, whole genome shotgun sequen [...] (355 aa)
  •  •••0.913
FLS4
SubName- Full=Chromosome chr18 scaffold_1, whole genome shotgun sequence; (335 aa)
  •  •••0.911
FLS3
SubName- Full=Chromosome chr18 scaffold_1, whole genome shotgun sequence; (271 aa)
  •  •••0.911
CHI1
RecName- Full=Chalcone--flavonone isomerase 2; Short=Chalcone isomerase 2; EC=5.5.1.6;; Catalyz [...] (234 aa)
     •  0.899
GSVIVG00022302001
SubName- Full=Chromosome chr6 scaffold_25, whole genome shotgun sequence; (155 aa)
     •  0.899
GSVIVG00022301001
SubName- Full=Chromosome chr6 scaffold_25, whole genome shotgun sequence; (217 aa)
     •  0.899
GSVIVG00022298001
SubName- Full=Chromosome chr6 scaffold_25, whole genome shotgun sequence; (508 aa)
     •  0.899

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query295
PLN02515358 PLN02515, PLN02515, naringenin,2-oxoglutarate 3-di 0.0
PLN03176120 PLN03176, PLN03176, flavanone-3-hydroxylase; Provi 1e-71
PLN03178360 PLN03178, PLN03178, leucoanthocyanidin dioxygenase 1e-63
PLN02639337 PLN02639, PLN02639, oxidoreductase, 2OG-Fe(II) oxy 5e-62
PLN02393362 PLN02393, PLN02393, leucoanthocyanidin dioxygenase 6e-57
PLN02912348 PLN02912, PLN02912, oxidoreductase, 2OG-Fe(II) oxy 2e-54
PLN02750345 PLN02750, PLN02750, oxidoreductase, 2OG-Fe(II) oxy 9e-52
PLN02758361 PLN02758, PLN02758, oxidoreductase, 2OG-Fe(II) oxy 1e-50
PLN02947374 PLN02947, PLN02947, oxidoreductase 8e-50
PLN02704335 PLN02704, PLN02704, flavonol synthase 4e-49
PLN02276361 PLN02276, PLN02276, gibberellin 20-oxidase 4e-44
PLN03001262 PLN03001, PLN03001, oxidoreductase, 2OG-Fe(II) oxy 1e-43
COG3491322 COG3491, PcbC, Isopenicillin N synthase and relate 9e-43
PLN02216357 PLN02216, PLN02216, protein SRG1 4e-42
PLN02254358 PLN02254, PLN02254, gibberellin 3-beta-dioxygenase 1e-41
PLN02904357 PLN02904, PLN02904, oxidoreductase 1e-38
PLN02997325 PLN02997, PLN02997, flavonol synthase 2e-37
PLN02299321 PLN02299, PLN02299, 1-aminocyclopropane-1-carboxyl 2e-36
PTZ00273320 PTZ00273, PTZ00273, oxidase reductase; Provisional 2e-34
PLN02403303 PLN02403, PLN02403, aminocyclopropanecarboxylate o 3e-33
pfam14226113 pfam14226, DIOX_N, non-haem dioxygenase in morphin 3e-33
PLN00417348 PLN00417, PLN00417, oxidoreductase, 2OG-Fe(II) oxy 2e-32
PLN02984341 PLN02984, PLN02984, oxidoreductase, 2OG-Fe(II) oxy 1e-23
PLN02365300 PLN02365, PLN02365, 2-oxoglutarate-dependent dioxy 1e-20
PLN02485329 PLN02485, PLN02485, oxidoreductase 1e-20
PLN02156335 PLN02156, PLN02156, gibberellin 2-beta-dioxygenase 7e-20
pfam0317196 pfam03171, 2OG-FeII_Oxy, 2OG-Fe(II) oxygenase supe 1e-18
PLN03002332 PLN03002, PLN03002, oxidoreductase, 2OG-Fe(II) oxy 6e-17
>gnl|CDD|178130 PLN02515, PLN02515, naringenin,2-oxoglutarate 3-dioxygenase Back     alignment and domain information 
 Score =  538 bits (1387), Expect = 0.0
 Identities = 229/263 (87%), Positives = 249/263 (94%)

Query: 1   MAPSTLTALAGEKTLNPSFVRFQDERPKVAYNEFSNEIPVISLAGIDDVGGKRAEICKKI 60
           MAP TLTALAGE TL  SFVR +DERPKVAYN+FS+EIPVISLAGID+VGG+R EIC+KI
Sbjct: 1   MAPGTLTALAGESTLQSSFVRDEDERPKVAYNQFSDEIPVISLAGIDEVGGRRGEICRKI 60

Query: 61  VEACEDWGIFQVVDHGVDAKLISDMTRLATEFFALPPEEKLKFDMSGGKKGGFIVSSHLQ 120
           VEACEDWGIFQVVDHGVDA L++DMTRLA +FFALP EEKL+FDMSGGKKGGFIVSSHLQ
Sbjct: 61  VEACEDWGIFQVVDHGVDANLVADMTRLARDFFALPAEEKLRFDMSGGKKGGFIVSSHLQ 120

Query: 121 GEVVKDWREIVTYFSFPKQSRDYSRWPDKPEGWMEVTKEYSDKLMGVACKLLEVLSEAMG 180
           GE V+DWREIVTYFS+P ++RDYSRWPDKPEGW  VT+EYS+KLMG+ACKLLEVLSEAMG
Sbjct: 121 GEAVQDWREIVTYFSYPVRTRDYSRWPDKPEGWRAVTEEYSEKLMGLACKLLEVLSEAMG 180

Query: 181 LEKEALTKACVDMDQKIVVNYYPKCPQPDLTLGLKRHTDPGTITLLLQDQVGGLQATKDN 240
           LEKEALTKACVDMDQK+VVNYYPKCPQPDLTLGLKRHTDPGTITLLLQDQVGGLQAT+D 
Sbjct: 181 LEKEALTKACVDMDQKVVVNYYPKCPQPDLTLGLKRHTDPGTITLLLQDQVGGLQATRDG 240

Query: 241 GKTWITVQPIEGAFVVNLGDHGH 263
           GKTWITVQP+EGAFVVNLGDHGH
Sbjct: 241 GKTWITVQPVEGAFVVNLGDHGH 263

Length = 358
>gnl|CDD|178720 PLN03176, PLN03176, flavanone-3-hydroxylase; Provisional Back     alignment and domain information
>gnl|CDD|215614 PLN03178, PLN03178, leucoanthocyanidin dioxygenase; Provisional Back     alignment and domain information
>gnl|CDD|178245 PLN02639, PLN02639, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|215220 PLN02393, PLN02393, leucoanthocyanidin dioxygenase like protein Back     alignment and domain information
>gnl|CDD|178500 PLN02912, PLN02912, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|178351 PLN02750, PLN02750, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|215404 PLN02758, PLN02758, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|215510 PLN02947, PLN02947, oxidoreductase Back     alignment and domain information
>gnl|CDD|166345 PLN02704, PLN02704, flavonol synthase Back     alignment and domain information
>gnl|CDD|215156 PLN02276, PLN02276, gibberellin 20-oxidase Back     alignment and domain information
>gnl|CDD|166642 PLN03001, PLN03001, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|226022 COG3491, PcbC, Isopenicillin N synthase and related dioxygenases [General function prediction only] Back     alignment and domain information
>gnl|CDD|215129 PLN02216, PLN02216, protein SRG1 Back     alignment and domain information
>gnl|CDD|215142 PLN02254, PLN02254, gibberellin 3-beta-dioxygenase Back     alignment and domain information
>gnl|CDD|178492 PLN02904, PLN02904, oxidoreductase Back     alignment and domain information
>gnl|CDD|178576 PLN02997, PLN02997, flavonol synthase Back     alignment and domain information
>gnl|CDD|215168 PLN02299, PLN02299, 1-aminocyclopropane-1-carboxylate oxidase Back     alignment and domain information
>gnl|CDD|140299 PTZ00273, PTZ00273, oxidase reductase; Provisional Back     alignment and domain information
>gnl|CDD|178025 PLN02403, PLN02403, aminocyclopropanecarboxylate oxidase Back     alignment and domain information
>gnl|CDD|222608 pfam14226, DIOX_N, non-haem dioxygenase in morphine synthesis N-terminal Back     alignment and domain information
>gnl|CDD|177810 PLN00417, PLN00417, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|215534 PLN02984, PLN02984, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|177993 PLN02365, PLN02365, 2-oxoglutarate-dependent dioxygenase Back     alignment and domain information
>gnl|CDD|215267 PLN02485, PLN02485, oxidoreductase Back     alignment and domain information
>gnl|CDD|177816 PLN02156, PLN02156, gibberellin 2-beta-dioxygenase Back     alignment and domain information
>gnl|CDD|217403 pfam03171, 2OG-FeII_Oxy, 2OG-Fe(II) oxygenase superfamily Back     alignment and domain information
>gnl|CDD|178579 PLN03002, PLN03002, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 295
PLN02515358 naringenin,2-oxoglutarate 3-dioxygenase 100.0
PLN02216357 protein SRG1 100.0
PLN02758361 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN02254358 gibberellin 3-beta-dioxygenase 100.0
COG3491322 PcbC Isopenicillin N synthase and related dioxygen 100.0
PLN03178360 leucoanthocyanidin dioxygenase; Provisional 100.0
PLN02912348 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN02750345 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN02276361 gibberellin 20-oxidase 100.0
PLN02393362 leucoanthocyanidin dioxygenase like protein 100.0
PLN02639337 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN02904357 oxidoreductase 100.0
PLN02947374 oxidoreductase 100.0
PLN00417348 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN02704335 flavonol synthase 100.0
PTZ00273320 oxidase reductase; Provisional 100.0
PLN02997325 flavonol synthase 100.0
PLN02485329 oxidoreductase 100.0
PLN03002332 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN02299321 1-aminocyclopropane-1-carboxylate oxidase 100.0
PLN02156335 gibberellin 2-beta-dioxygenase 100.0
KOG0143322 consensus Iron/ascorbate family oxidoreductases [S 100.0
PLN02403303 aminocyclopropanecarboxylate oxidase 100.0
PLN02984341 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN02365300 2-oxoglutarate-dependent dioxygenase 100.0
PLN03001262 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN03176120 flavanone-3-hydroxylase; Provisional 99.92
PF14226116 DIOX_N: non-haem dioxygenase in morphine synthesis 99.89
PF0317198 2OG-FeII_Oxy: 2OG-Fe(II) oxygenase superfamily Ent 99.84
PF12851171 Tet_JBP: Oxygenase domain of the 2OGFeDO superfami 94.89
PF13640100 2OG-FeII_Oxy_3: 2OG-Fe(II) oxygenase superfamily; 92.34
PF13532194 2OG-FeII_Oxy_2: 2OG-Fe(II) oxygenase superfamily; 89.7
PRK15401213 alpha-ketoglutarate-dependent dioxygenase AlkB; Pr 89.6
smart00702178 P4Hc Prolyl 4-hydroxylase alpha subunit homologues 89.18
>PLN02515 naringenin,2-oxoglutarate 3-dioxygenase Back     alignment and domain information 
Probab=100.00  E-value=1.8e-72  Score=515.62  Aligned_cols=295  Identities=78%  Similarity=1.240  Sum_probs=261.6

Q ss_pred             CCccchhhccCCCCCCccccCCCCCCCccccCCCCCCCceeecCCCCCCcchHHHHHHHHHHHhHhccEEEEeeCCCCHH
Q 022556            1 MAPSTLTALAGEKTLNPSFVRFQDERPKVAYNEFSNEIPVISLAGIDDVGGKRAEICKKIVEACEDWGIFQVVDHGVDAK   80 (295)
Q Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iPvIDls~l~~~~~~~~~~~~~l~~A~~~~Gff~l~nhgi~~~   80 (295)
                      |||.|+++.+++..+|.+|+++..++|.......+.+||+|||+.+..++.++.+++++|.+||++||||||+||||+.+
T Consensus         1 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~iPvIDls~~~~~~~~~~~~~~~l~~Ac~~~GFf~v~nHGI~~~   80 (358)
T PLN02515          1 MAPGTLTALAGESTLQSSFVRDEDERPKVAYNQFSDEIPVISLAGIDEVGGRRGEICRKIVEACEDWGIFQVVDHGVDAN   80 (358)
T ss_pred             CCccccccccCCCcCCHHhcCCchhccCccccccCCCCCEEEChhccCCchHHHHHHHHHHHHHHHCcEEEEEcCCCCHH
Confidence            89999999999999999999998888754333344579999999987544557789999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhcCCHhhhcccccCCCCccceeeecccCCCcccchhhhhhhcccCCCCCCCCCCCCCCcchHHHHHHH
Q 022556           81 LISDMTRLATEFFALPPEEKLKFDMSGGKKGGFIVSSHLQGEVVKDWREIVTYFSFPKQSRDYSRWPDKPEGWMEVTKEY  160 (295)
Q Consensus        81 ~~~~~~~~~~~fF~lp~e~K~~~~~~~~~~~Gy~~~~~~~~~~~~d~~e~~~~~~~~~~~~~~~~wP~~~~~fr~~~~~y  160 (295)
                      +++++++.+++||+||.|+|+++.......+||.......+....||+|.+.+...+......|.||+.+++||+.+++|
T Consensus        81 li~~~~~~~~~FF~LP~eeK~k~~~~~~~~~Gy~~~~~~~~~~~~d~kE~~~~~~~~~~~~~~n~WP~~~~~fr~~~~~y  160 (358)
T PLN02515         81 LVADMTRLARDFFALPAEEKLRFDMSGGKKGGFIVSSHLQGEAVQDWREIVTYFSYPVRTRDYSRWPDKPEGWRAVTEEY  160 (358)
T ss_pred             HHHHHHHHHHHHhcCCHHHHhhhCcCCCCccCcccccccccccccCceeeeccccCcccccccccccccchHHHHHHHHH
Confidence            99999999999999999999998766555578864333334456799999876545554456799999889999999999


Q ss_pred             HHHHHHHHHHHHHHHHHhcCCChHHHHHHhcCCCceeEeeccCCCCCCCCcccccccccCCceEEEecCCCCceeEeeCC
Q 022556          161 SDKLMGVACKLLEVLSEAMGLEKEALTKACVDMDQKIVVNYYPKCPQPDLTLGLKRHTDPGTITLLLQDQVGGLQATKDN  240 (295)
Q Consensus       161 ~~~~~~l~~~ll~~l~~~Lgl~~~~~~~~~~~~~~~lrl~~Yp~~~~~~~~~g~~~HtD~g~lTlL~q~~~~GLqV~~~~  240 (295)
                      +++|.+++..|+++|+++||+++++|.+.+....+.+|++|||+++.++..+|+++|||+|+||||+|+.++||||+.++
T Consensus       161 ~~~~~~L~~~ll~~la~~Lgl~~~~f~~~~~~~~~~lrl~~YP~~~~~~~~~G~~~HTD~g~lTlL~Qd~v~GLQV~~~~  240 (358)
T PLN02515        161 SEKLMGLACKLLEVLSEAMGLEKEALTKACVDMDQKVVVNYYPKCPQPDLTLGLKRHTDPGTITLLLQDQVGGLQATRDG  240 (358)
T ss_pred             HHHHHHHHHHHHHHHHHhcCCChhhHHHhhcCccceEEEeecCCCCChhhccCCCCCCCCCeEEEEecCCCCceEEEECC
Confidence            99999999999999999999999999998887778899999999987778899999999999999999999999999876


Q ss_pred             CCCeEeecCCCCcEEEEcchHHHHhhCCCcccc--------ccceeeEEEEeeeCCCcceecC
Q 022556          241 GKTWITVQPIEGAFVVNLGDHGHVSIYANTALI--------FLFLFILFYCFCLNHDVVLSRL  295 (295)
Q Consensus       241 g~~W~~V~~~~g~~vVnvGd~L~~~TnG~~~a~--------~~~R~S~~~F~~p~~d~~i~~l  295 (295)
                      +++|++|+|.||++|||+||+|++||||+||||        ..+|||++||++|+.|++|+||
T Consensus       241 ~~~Wi~Vpp~pgalVVNiGD~L~~~TNG~~kSt~HRVv~~~~~~R~Si~~F~~P~~d~~i~Pl  303 (358)
T PLN02515        241 GKTWITVQPVEGAFVVNLGDHGHYLSNGRFKNADHQAVVNSNCSRLSIATFQNPAPDATVYPL  303 (358)
T ss_pred             CCeEEECCCCCCeEEEEccHHHHHHhCCeeeeecceEECCCCCCEEEEEEEecCCCCCEEECC
Confidence            557999999999999999999999999999999        5679999999999999999986

>PLN02216 protein SRG1 Back     alignment and domain information
>PLN02758 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN02254 gibberellin 3-beta-dioxygenase Back     alignment and domain information
>COG3491 PcbC Isopenicillin N synthase and related dioxygenases [General function prediction only] Back     alignment and domain information
>PLN03178 leucoanthocyanidin dioxygenase; Provisional Back     alignment and domain information
>PLN02912 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN02750 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN02276 gibberellin 20-oxidase Back     alignment and domain information
>PLN02393 leucoanthocyanidin dioxygenase like protein Back     alignment and domain information
>PLN02639 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN02904 oxidoreductase Back     alignment and domain information
>PLN02947 oxidoreductase Back     alignment and domain information
>PLN00417 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN02704 flavonol synthase Back     alignment and domain information
>PTZ00273 oxidase reductase; Provisional Back     alignment and domain information
>PLN02997 flavonol synthase Back     alignment and domain information
>PLN02485 oxidoreductase Back     alignment and domain information
>PLN03002 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN02299 1-aminocyclopropane-1-carboxylate oxidase Back     alignment and domain information
>PLN02156 gibberellin 2-beta-dioxygenase Back     alignment and domain information
>KOG0143 consensus Iron/ascorbate family oxidoreductases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only] Back     alignment and domain information
>PLN02403 aminocyclopropanecarboxylate oxidase Back     alignment and domain information
>PLN02984 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN02365 2-oxoglutarate-dependent dioxygenase Back     alignment and domain information
>PLN03001 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN03176 flavanone-3-hydroxylase; Provisional Back     alignment and domain information
>PF14226 DIOX_N: non-haem dioxygenase in morphine synthesis N-terminal; PDB: 3OOX_A 1BK0_A 1IPS_B 1QIQ_A 1OC1_A 2Y86_A 2Y60_A 1W03_A 2VE1_A 1QJF_A Back     alignment and domain information
>PF03171 2OG-FeII_Oxy: 2OG-Fe(II) oxygenase superfamily Entry for Lysyl hydrolases This Prosite entry is a sub-family of the Pfam entry; InterPro: IPR005123 This domain is found in members of the 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily [], as well as the C-terminal of prolyl 4-hydroxylase alpha subunit Back     alignment and domain information
>PF12851 Tet_JBP: Oxygenase domain of the 2OGFeDO superfamily ; InterPro: IPR024779 TETs are 2OG- and Fe(II)-dependent oxygenases that catalyse the conversion of 5 methyl-Cytosine (5-MC) to 5-hydroxymethyl-cytosine (hmC) in cultured cells and in vitro [] Back     alignment and domain information
>PF13640 2OG-FeII_Oxy_3: 2OG-Fe(II) oxygenase superfamily; PDB: 3DKQ_B 3GZE_D 3HQR_A 2Y34_A 2G1M_A 2G19_A 3OUI_A 3OUJ_A 2HBU_A 2Y33_A Back     alignment and domain information
>PF13532 2OG-FeII_Oxy_2: 2OG-Fe(II) oxygenase superfamily; PDB: 2IUW_A 3BTZ_A 3RZL_A 3RZH_A 3S5A_A 3RZG_A 3RZJ_A 3BUC_A 3H8X_A 3H8R_A Back     alignment and domain information
>PRK15401 alpha-ketoglutarate-dependent dioxygenase AlkB; Provisional Back     alignment and domain information
>smart00702 P4Hc Prolyl 4-hydroxylase alpha subunit homologues Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query295
2brt_A355 Anthocyanidin Synthase From Arabidopsis Thaliana Co 2e-34
1gp5_A356 Anthocyanidin Synthase From Arabidopsis Thaliana Co 2e-34
1gp4_A356 Anthocyanidin Synthase From Arabidopsis Thaliana (S 9e-34
1w9y_A319 The Structure Of Acc Oxidase Length = 319 2e-26
3oox_A312 Crystal Structure Of A Putative 2og-Fe(Ii) Oxygenas 1e-11
2bjs_A325 Isopenicillin N Synthase C-Terminal Truncation Muta 2e-06
1ips_A331 Isopenicillin N Synthase From Aspergillus Nidulans 2e-06
>pdb|2BRT|A Chain A, Anthocyanidin Synthase From Arabidopsis Thaliana Complexed With Naringenin Length = 355 Back     alignment and structure 
Iteration: 1

 Score =  142 bits (358), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 78/232 (33%), Positives = 138/232 (59%), Gaps = 12/232 (5%)
Query: 37  EIPVISLAGIDDVGGKRAEIC-KKIVEACEDWGIFQVVDHGVDAKLISDMTRLATEFFAL 95
           ++P I L  I+    K  E C +++ +A  DWG+  +++HG+ A L+  + +   EFF+L
Sbjct: 45  QVPTIDLKNIESDDEKIRENCIEELKKASLDWGVMHLINHGIPADLMERVKKAGEEFFSL 104
Query: 96  PPEEKLKF--DMSGGKKGGF--IVSSHLQGEVVKDWREIVTYFSFPKQSRDYSRWPDKPE 151
             EEK K+  D + GK  G+   ++++  G++  +W +   + ++P++ RD S WP  P 
Sbjct: 105 SVEEKEKYANDQATGKIQGYGSKLANNASGQL--EWEDYFFHLAYPEEKRDLSIWPKTPS 162
Query: 152 GWMEVTKEYSDKLMGVACKLLEVLSEAMGLEKEALTKACVDMDQKIV---VNYYPKCPQP 208
            ++E T EY+  L  +A K+ + LS  +GLE + L K    +++ ++   +NYYPKCPQP
Sbjct: 163 DYIEATSEYAKCLRLLATKVFKALSVGLGLEPDRLEKEVGGLEELLLQMKINYYPKCPQP 222
Query: 209 DLTLGLKRHTDPGTITLLLQDQVGGLQATKDNGKTWITVQPIEGAFVVNLGD 260
           +L LG++ HTD   +T +L + V GLQ   + GK W+T + +  + V+++GD
Sbjct: 223 ELALGVEAHTDVSALTFILHNMVPGLQLFYE-GK-WVTAKCVPDSIVMHIGD 272
>pdb|1GP5|A Chain A, Anthocyanidin Synthase From Arabidopsis Thaliana Complexed With Trans-Dihydroquercetin Length = 356 Back     alignment and structure
>pdb|1GP4|A Chain A, Anthocyanidin Synthase From Arabidopsis Thaliana (Selenomethionine Substituted) Length = 356 Back     alignment and structure
>pdb|1W9Y|A Chain A, The Structure Of Acc Oxidase Length = 319 Back     alignment and structure
>pdb|3OOX|A Chain A, Crystal Structure Of A Putative 2og-Fe(Ii) Oxygenase Family Protein (Cc_0200) From Caulobacter Crescentus At 1.44 A Resolution Length = 312 Back     alignment and structure
>pdb|2BJS|A Chain A, Isopenicillin N Synthase C-Terminal Truncation Mutant Length = 325 Back     alignment and structure
>pdb|1IPS|A Chain A, Isopenicillin N Synthase From Aspergillus Nidulans (Manganese Complex) Length = 331 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query295
1gp6_A356 Leucoanthocyanidin dioxygenase; 2-oxoglutarate dep 1e-116
1w9y_A319 1-aminocyclopropane-1-carboxylate oxidase 1; oxyge 1e-104
3on7_A280 Oxidoreductase, iron/ascorbate family; structural 7e-64
3oox_A312 Putative 2OG-Fe(II) oxygenase family protein; stru 1e-63
1odm_A331 Isopenicillin N synthase; antibiotic biosynthesis, 2e-63
1dcs_A311 Deacetoxycephalosporin C synthase; ferrous oxygena 8e-62
>1gp6_A Leucoanthocyanidin dioxygenase; 2-oxoglutarate dependent dioxygenase, flavonoid biosynthesis; HET: MES QUE DH2; 1.75A {Arabidopsis thaliana} SCOP: b.82.2.1 PDB: 1gp5_A* 1gp4_A* 2brt_A* Length = 356 Back     alignment and structure
 Score =  336 bits (864), Expect = e-116
 Identities = 79/269 (29%), Positives = 141/269 (52%), Gaps = 14/269 (5%)

Query: 8   ALAGEKTLNPSFVRFQDERPKV------AYNEFSNEIPVISLAGID-DVGGKRAEICKKI 60
           A +G  ++   ++R ++E   +         E   ++P I L  I+ D    R    +++
Sbjct: 11  AKSGIISIPKEYIRPKEELESINDVFLEEKKEDGPQVPTIDLKNIESDDEKIRENCIEEL 70

Query: 61  VEACEDWGIFQVVDHGVDAKLISDMTRLATEFFALPPEEKLKF--DMSGGKKGGFIVSSH 118
            +A  DWG+  +++HG+ A L+  + +   EFF+L  EEK K+  D + GK  G+     
Sbjct: 71  KKASLDWGVMHLINHGIPADLMERVKKAGEEFFSLSVEEKEKYANDQATGKIQGYGSKLA 130

Query: 119 LQGEVVKDWREIVTYFSFPKQSRDYSRWPDKPEGWMEVTKEYSDKLMGVACKLLEVLSEA 178
                  +W +   + ++P++ RD S WP  P  ++E T EY+  L  +A K+ + LS  
Sbjct: 131 NNASGQLEWEDYFFHLAYPEEKRDLSIWPKTPSDYIEATSEYAKCLRLLATKVFKALSVG 190

Query: 179 MGLEKEALTKACVDMD---QKIVVNYYPKCPQPDLTLGLKRHTDPGTITLLLQDQVGGLQ 235
           +GLE + L K    ++    ++ +NYYPKCPQP+L LG++ HTD   +T +L + V GLQ
Sbjct: 191 LGLEPDRLEKEVGGLEELLLQMKINYYPKCPQPELALGVEAHTDVSALTFILHNMVPGLQ 250

Query: 236 ATKDNGKTWITVQPIEGAFVVNLGDHGHV 264
              +    W+T + +  + V+++GD   +
Sbjct: 251 LFYEG--KWVTAKCVPDSIVMHIGDTLEI 277
>1w9y_A 1-aminocyclopropane-1-carboxylate oxidase 1; oxygenase, 2OG oxygenase, ACCO, ACC oxidase; 2.1A {Petunia hybrida} SCOP: b.82.2.1 PDB: 1wa6_X Length = 319 Back     alignment and structure
>3on7_A Oxidoreductase, iron/ascorbate family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.20A {Shewanella oneidensis} Length = 280 Back     alignment and structure
>3oox_A Putative 2OG-Fe(II) oxygenase family protein; structural genomics, joint center for structural genomics; HET: MSE; 1.44A {Caulobacter crescentus CB15} Length = 312 Back     alignment and structure
>1odm_A Isopenicillin N synthase; antibiotic biosynthesis, B-lactam antibiotic, oxygenase, penicillin biosynthesis, oxidoreductase, iron; HET: ASV; 1.15A {Emericella nidulans} SCOP: b.82.2.1 PDB: 1blz_A* 1hb1_A* 1hb2_A* 1hb3_A* 1hb4_A* 1ips_A 1obn_A* 1oc1_A* 1bk0_A* 1odn_A* 1qiq_A* 1qje_A* 1qjf_A* 1uzw_A* 1w03_A* 1w04_A* 1w05_A* 1w06_A* 1w3v_A* 1w3x_A* ... Length = 331 Back     alignment and structure
>1dcs_A Deacetoxycephalosporin C synthase; ferrous oxygenase, 2-oxoglutarate, oxidoreduc antibiotics, merohedral twinning; 1.30A {Streptomyces clavuligerus} SCOP: b.82.2.1 PDB: 1rxf_A 1rxg_A* 1unb_A* 1uo9_A 1uob_A* 1uof_A* 1uog_A* 2jb8_A 1w28_A 1w2a_X 1w2n_A* 1w2o_A* 1hjg_A 1hjf_A 1e5h_A 1e5i_A* Length = 311 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query295
1gp6_A356 Leucoanthocyanidin dioxygenase; 2-oxoglutarate dep 100.0
3oox_A312 Putative 2OG-Fe(II) oxygenase family protein; stru 100.0
1w9y_A319 1-aminocyclopropane-1-carboxylate oxidase 1; oxyge 100.0
1odm_A331 Isopenicillin N synthase; antibiotic biosynthesis, 100.0
3on7_A280 Oxidoreductase, iron/ascorbate family; structural 100.0
1dcs_A311 Deacetoxycephalosporin C synthase; ferrous oxygena 100.0
2hbt_A247 EGL nine homolog 1; prolyl hydroxylase, hypoxia in 87.87
2iuw_A238 Alkylated repair protein ALKB homolog 3; oxidoredu 85.33
3dkq_A243 PKHD-type hydroxylase SBAL_3634; putative oxygenas 84.94
>1gp6_A Leucoanthocyanidin dioxygenase; 2-oxoglutarate dependent dioxygenase, flavonoid biosynthesis; HET: MES QUE DH2; 1.75A {Arabidopsis thaliana} SCOP: b.82.2.1 PDB: 1gp5_A* 1gp4_A* 2brt_A* Back     alignment and structure
Probab=100.00  E-value=3.7e-68  Score=488.01  Aligned_cols=284  Identities=28%  Similarity=0.513  Sum_probs=248.2

Q ss_pred             cCCCCCCccccCCCCCCCcccc---CC---CCCCCceeecCCCCCC-cchHHHHHHHHHHHhHhccEEEEeeCCCCHHHH
Q 022556           10 AGEKTLNPSFVRFQDERPKVAY---NE---FSNEIPVISLAGIDDV-GGKRAEICKKIVEACEDWGIFQVVDHGVDAKLI   82 (295)
Q Consensus        10 ~~~~~~~~~~~~~~~~~~~~~~---~~---~~~~iPvIDls~l~~~-~~~~~~~~~~l~~A~~~~Gff~l~nhgi~~~~~   82 (295)
                      ++++.+|++|++|..+++....   ..   .+.+||||||+.|.++ ++++++++++|.+||++||||||+||||+.+++
T Consensus        13 ~~~~~vP~~~~~p~~~~~~~~~~~~~~~~~~~~~iPvIDls~l~~~~~~~~~~~~~~l~~A~~~~GFF~v~nHGi~~~l~   92 (356)
T 1gp6_A           13 SGIISIPKEYIRPKEELESINDVFLEEKKEDGPQVPTIDLKNIESDDEKIRENCIEELKKASLDWGVMHLINHGIPADLM   92 (356)
T ss_dssp             TTCSSCCGGGSCCHHHHTTCCCHHHHHHCCCSCCCCEEECTTTTCSCHHHHHHHHHHHHHHHHHTSEEEEESCSCCHHHH
T ss_pred             cCCCCCCHHhcCCchhcccccccccccccccCCCCCEEEchhccCCChHHHHHHHHHHHHHHHhCCEEEEeCCCCCHHHH
Confidence            4689999999999877664221   00   1346999999999753 345778999999999999999999999999999


Q ss_pred             HHHHHHHHHHhcCCHhhhcccccCCC--CccceeeecccCCCcccchhhhhhhcccCCCCCCCCCCCCCCcchHHHHHHH
Q 022556           83 SDMTRLATEFFALPPEEKLKFDMSGG--KKGGFIVSSHLQGEVVKDWREIVTYFSFPKQSRDYSRWPDKPEGWMEVTKEY  160 (295)
Q Consensus        83 ~~~~~~~~~fF~lp~e~K~~~~~~~~--~~~Gy~~~~~~~~~~~~d~~e~~~~~~~~~~~~~~~~wP~~~~~fr~~~~~y  160 (295)
                      +++++.+++||+||.|+|+++.....  ..+||.........+..||+|.|.+...+......|.||..+|+||+.+++|
T Consensus        93 ~~~~~~~~~FF~lP~eeK~~~~~~~~~~~~~Gy~~~~~~~~~~~~d~kE~~~~~~~p~~~~~~~~wP~~~~~fr~~~~~y  172 (356)
T 1gp6_A           93 ERVKKAGEEFFSLSVEEKEKYANDQATGKIQGYGSKLANNASGQLEWEDYFFHLAYPEEKRDLSIWPKTPSDYIEATSEY  172 (356)
T ss_dssp             HHHHHHHHHHHTSCHHHHGGGBCBGGGTBCSEEECCCCCSTTCCCCSCEEEEEEEESGGGCCGGGSCCSSTTHHHHHHHH
T ss_pred             HHHHHHHHHHHCCCHHHHHhhcccccccCccccCcCcccCCCCCCChhheeeeecCCccccccccCCCcchhhhHHHHHH
Confidence            99999999999999999999976543  5688865433334567899999987665544346789999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHhcCCChHHHHHHhc---CCCceeEeeccCCCCCCCCcccccccccCCceEEEecCCCCceeEe
Q 022556          161 SDKLMGVACKLLEVLSEAMGLEKEALTKACV---DMDQKIVVNYYPKCPQPDLTLGLKRHTDPGTITLLLQDQVGGLQAT  237 (295)
Q Consensus       161 ~~~~~~l~~~ll~~l~~~Lgl~~~~~~~~~~---~~~~~lrl~~Yp~~~~~~~~~g~~~HtD~g~lTlL~q~~~~GLqV~  237 (295)
                      +++|.+++..|+++|+++||+++++|.+.+.   ...+.+|++|||+++.++..+|+++|||+|+||||+|+.++||||+
T Consensus       173 ~~~~~~l~~~ll~~la~~Lgl~~~~f~~~~~~~~~~~~~lrl~~YPp~~~~~~~~g~~~HtD~g~lTlL~qd~v~GLQV~  252 (356)
T 1gp6_A          173 AKCLRLLATKVFKALSVGLGLEPDRLEKEVGGLEELLLQMKINYYPKCPQPELALGVEAHTDVSALTFILHNMVPGLQLF  252 (356)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTSCTTHHHHHTTHHHHCEEEEEEEEECCCSSTTTCCSEEEECCCSSEEEEEECSCCCEEEE
T ss_pred             HHHHHHHHHHHHHHHHHHcCCCHHHHHHHhcccCCccceeeeeecCCCCCcccccCcCCccCCCeEEEEEEcCCCCeEEe
Confidence            9999999999999999999999999999887   4678899999999998888899999999999999999999999999


Q ss_pred             eCCCCCeEeecCCCCcEEEEcchHHHHhhCCCcccc--------ccceeeEEEEeeeCCCc-ceecC
Q 022556          238 KDNGKTWITVQPIEGAFVVNLGDHGHVSIYANTALI--------FLFLFILFYCFCLNHDV-VLSRL  295 (295)
Q Consensus       238 ~~~g~~W~~V~~~~g~~vVnvGd~L~~~TnG~~~a~--------~~~R~S~~~F~~p~~d~-~i~~l  295 (295)
                      +++  +|++|+|.+|++||||||+||+||||++||+        ..+|||++||++|+.|+ +|+||
T Consensus       253 ~~g--~Wi~V~p~pgalvVNiGD~l~~~TnG~~kS~~HRVv~~~~~~R~Sia~F~~P~~d~~~i~pl  317 (356)
T 1gp6_A          253 YEG--KWVTAKCVPDSIVMHIGDTLEILSNGKYKSILHRGLVNKEKVRISWAVFCEPPKDKIVLKPL  317 (356)
T ss_dssp             ETT--EEEECCCCTTCEEEEECHHHHHHTTTSSCCCCEEECCCSSCCEEEEEEEEECCTTTCEECCC
T ss_pred             cCC--cEEECcCCCCeEEEEeccHHHHhcCCEeeccCceecCCCCCCEEEEEEeecCCCCCcEEeCC
Confidence            754  8999999999999999999999999999999        56899999999999999 99986
>3oox_A Putative 2OG-Fe(II) oxygenase family protein; structural genomics, joint center for structural genomics; HET: MSE; 1.44A {Caulobacter crescentus CB15} Back     alignment and structure
>1w9y_A 1-aminocyclopropane-1-carboxylate oxidase 1; oxygenase, 2OG oxygenase, ACCO, ACC oxidase; 2.1A {Petunia hybrida} SCOP: b.82.2.1 PDB: 1wa6_X Back     alignment and structure
>1odm_A Isopenicillin N synthase; antibiotic biosynthesis, B-lactam antibiotic, oxygenase, penicillin biosynthesis, oxidoreductase, iron; HET: ASV; 1.15A {Emericella nidulans} SCOP: b.82.2.1 PDB: 1blz_A* 1hb1_A* 1hb2_A* 1hb3_A* 1hb4_A* 1ips_A 1obn_A* 1oc1_A* 1bk0_A* 1odn_A* 1qiq_A* 1qje_A* 1qjf_A* 1uzw_A* 1w03_A* 1w04_A* 1w05_A* 1w06_A* 1w3v_A* 1w3x_A* ... Back     alignment and structure
>3on7_A Oxidoreductase, iron/ascorbate family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.20A {Shewanella oneidensis} Back     alignment and structure
>1dcs_A Deacetoxycephalosporin C synthase; ferrous oxygenase, 2-oxoglutarate, oxidoreduc antibiotics, merohedral twinning; 1.30A {Streptomyces clavuligerus} SCOP: b.82.2.1 PDB: 1rxf_A 1rxg_A* 1unb_A* 1uo9_A 1uob_A* 1uof_A* 1uog_A* 2jb8_A 1w28_A 1w2a_X 1w2n_A* 1w2o_A* 1hjg_A 1hjf_A 1e5h_A 1e5i_A* Back     alignment and structure
>2hbt_A EGL nine homolog 1; prolyl hydroxylase, hypoxia inducible factor, HIF, 2- oxoglutarate, oxygenase, oxidoreductase; HET: UN9; 1.60A {Homo sapiens} PDB: 2hbu_A* 2g1m_A* 3hqu_A* 3hqr_A* 2y33_A* 2y34_A* 2g19_A* 3ouj_A* 3ouh_A* 3oui_A* Back     alignment and structure
>2iuw_A Alkylated repair protein ALKB homolog 3; oxidoreductase, DNA/RNA repair, demethylase, beta jellyroll; HET: AKG; 1.50A {Homo sapiens} SCOP: b.82.2.10 Back     alignment and structure
>3dkq_A PKHD-type hydroxylase SBAL_3634; putative oxygenase, structural genomics, JOI for structural genomics, JCSG; 2.26A {Shewanella baltica OS155} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 295
d1gp6a_349 b.82.2.1 (A:) Anthocyanidin synthase {Mouse-ear cr 4e-45
d1w9ya1307 b.82.2.1 (A:2-308) 1-aminocyclopropane-1-carboxyla 3e-43
d1dcsa_311 b.82.2.1 (A:) Deacetoxycephalosporin C synthase {S 5e-37
d1odma_329 b.82.2.1 (A:) Isopenicillin N synthase {Emericella 2e-26
>d1gp6a_ b.82.2.1 (A:) Anthocyanidin synthase {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 349 Back     information, alignment and structure

class: All beta proteins
fold: Double-stranded beta-helix
superfamily: Clavaminate synthase-like
family: Penicillin synthase-like
domain: Anthocyanidin synthase
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

 Score =  154 bits (389), Expect = 4e-45
 Identities = 77/269 (28%), Positives = 137/269 (50%), Gaps = 14/269 (5%)

Query: 8   ALAGEKTLNPSFVRFQDERPKV------AYNEFSNEIPVISLAGID-DVGGKRAEICKKI 60
           A +G  ++   ++R ++E   +         E   ++P I L  I+ D    R    +++
Sbjct: 10  AKSGIISIPKEYIRPKEELESINDVFLEEKKEDGPQVPTIDLKNIESDDEKIRENCIEEL 69

Query: 61  VEACEDWGIFQVVDHGVDAKLISDMTRLATEFFALPPEEKLKFDMSGGKKGGFIVSSHLQ 120
            +A  DWG+  +++HG+ A L+  + +   EFF+L  EEK K+             S L 
Sbjct: 70  KKASLDWGVMHLINHGIPADLMERVKKAGEEFFSLSVEEKEKYANDQATGKIQGYGSKLA 129

Query: 121 GEVVKD--WREIVTYFSFPKQSRDYSRWPDKPEGWMEVTKEYSDKLMGVACKLLEVLSEA 178
                   W +   + ++P++ RD S WP  P  ++E T EY+  L  +A K+ + LS  
Sbjct: 130 NNASGQLEWEDYFFHLAYPEEKRDLSIWPKTPSDYIEATSEYAKCLRLLATKVFKALSVG 189

Query: 179 MGLEKEALTKACVDMDQ---KIVVNYYPKCPQPDLTLGLKRHTDPGTITLLLQDQVGGLQ 235
           +GLE + L K    +++   ++ +NYYPKCPQP+L LG++ HTD   +T +L + V GLQ
Sbjct: 190 LGLEPDRLEKEVGGLEELLLQMKINYYPKCPQPELALGVEAHTDVSALTFILHNMVPGLQ 249

Query: 236 ATKDNGKTWITVQPIEGAFVVNLGDHGHV 264
              +    W+T + +  + V+++GD   +
Sbjct: 250 LFYEG--KWVTAKCVPDSIVMHIGDTLEI 276
>d1w9ya1 b.82.2.1 (A:2-308) 1-aminocyclopropane-1-carboxylate oxidase 1 {Petunia hybrida [TaxId: 4102]} Length = 307 Back     information, alignment and structure
>d1dcsa_ b.82.2.1 (A:) Deacetoxycephalosporin C synthase {Streptomyces clavuligerus [TaxId: 1901]} Length = 311 Back     information, alignment and structure
>d1odma_ b.82.2.1 (A:) Isopenicillin N synthase {Emericella nidulans [TaxId: 162425]} Length = 329 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query295
d1gp6a_349 Anthocyanidin synthase {Mouse-ear cress (Arabidops 100.0
d1w9ya1307 1-aminocyclopropane-1-carboxylate oxidase 1 {Petun 100.0
d1dcsa_311 Deacetoxycephalosporin C synthase {Streptomyces cl 100.0
d1odma_329 Isopenicillin N synthase {Emericella nidulans [Tax 100.0
d2iuwa1210 AlkB homolog 3 {Human (Homo sapiens) [TaxId: 9606] 92.62
d2fdia1200 Alkylated DNA repair protein AlkB {Escherichia col 85.95
>d1gp6a_ b.82.2.1 (A:) Anthocyanidin synthase {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]} Back     information, alignment and structure
class: All beta proteins
fold: Double-stranded beta-helix
superfamily: Clavaminate synthase-like
family: Penicillin synthase-like
domain: Anthocyanidin synthase
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=100.00  E-value=8.4e-65  Score=463.61  Aligned_cols=286  Identities=28%  Similarity=0.515  Sum_probs=240.9

Q ss_pred             hccCCCCCCccccCCCCCCCccc------cCCCCCCCceeecCCCCC-CcchHHHHHHHHHHHhHhccEEEEeeCCCCHH
Q 022556            8 ALAGEKTLNPSFVRFQDERPKVA------YNEFSNEIPVISLAGIDD-VGGKRAEICKKIVEACEDWGIFQVVDHGVDAK   80 (295)
Q Consensus         8 ~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~iPvIDls~l~~-~~~~~~~~~~~l~~A~~~~Gff~l~nhgi~~~   80 (295)
                      |.+|++.||+.|++|+.++|...      -.....+||||||+.|.+ ++..+++++++|.+||+++|||||+||||+.+
T Consensus        10 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~IPvIDls~l~~~d~~~r~~~~~~l~~A~~~~GFf~l~nHGI~~~   89 (349)
T d1gp6a_          10 AKSGIISIPKEYIRPKEELESINDVFLEEKKEDGPQVPTIDLKNIESDDEKIRENCIEELKKASLDWGVMHLINHGIPAD   89 (349)
T ss_dssp             HHTTCSSCCGGGSCCHHHHTTCCCHHHHHHCCCSCCCCEEECTTTTCSCHHHHHHHHHHHHHHHHHTSEEEEESCSCCHH
T ss_pred             HhCCCccCCHhhcCChhhcCCCCccccccccCCCCCcCeEEChhcCCCCHHHHHHHHHHHHHHHHhCCEEEEEccCCCHH
Confidence            56899999999999999887642      123355799999999975 45567889999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhcCCHhhhcccccCC--CCccceeeecccCCCcccchhhhhhhcccCCCCCCCCCCCCCCcchHHHHH
Q 022556           81 LISDMTRLATEFFALPPEEKLKFDMSG--GKKGGFIVSSHLQGEVVKDWREIVTYFSFPKQSRDYSRWPDKPEGWMEVTK  158 (295)
Q Consensus        81 ~~~~~~~~~~~fF~lp~e~K~~~~~~~--~~~~Gy~~~~~~~~~~~~d~~e~~~~~~~~~~~~~~~~wP~~~~~fr~~~~  158 (295)
                      +++++++.+++||+||.|+|+++....  +.++||............++.+.+.....+.....+|.||...+.|++.++
T Consensus        90 li~~~~~~~~~FF~lP~eeK~k~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~wp~~~~~f~e~~~  169 (349)
T d1gp6a_          90 LMERVKKAGEEFFSLSVEEKEKYANDQATGKIQGYGSKLANNASGQLEWEDYFFHLAYPEEKRDLSIWPKTPSDYIEATS  169 (349)
T ss_dssp             HHHHHHHHHHHHHTSCHHHHGGGBCBGGGTBCSEEECCCCCSTTCCCCSCEEEEEEEESGGGCCGGGSCCSSTTHHHHHH
T ss_pred             HHHHHHHHHHHHHcCCHHHHhhhhcccccCCccccccccccccccccchhhhhcccccccccccccccccccchHHHHHH
Confidence            999999999999999999999997542  222344322222223344555543333334444567899999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHhcCCChHHHHHHhc---CCCceeEeeccCCCCCCCCcccccccccCCceEEEecCCCCcee
Q 022556          159 EYSDKLMGVACKLLEVLSEAMGLEKEALTKACV---DMDQKIVVNYYPKCPQPDLTLGLKRHTDPGTITLLLQDQVGGLQ  235 (295)
Q Consensus       159 ~y~~~~~~l~~~ll~~l~~~Lgl~~~~~~~~~~---~~~~~lrl~~Yp~~~~~~~~~g~~~HtD~g~lTlL~q~~~~GLq  235 (295)
                      +|+++|.+++..|+++++++||+++++|.+.+.   ...+.+|++|||+++.+...+|+++|||+|+||||+|+.++|||
T Consensus       170 ~~~~~~~~la~~ll~~la~~Lgl~~~~~~~~~~~~~~~~~~lrl~~Yp~~~~~~~~~g~~~HtD~g~lTlL~q~~~~GLq  249 (349)
T d1gp6a_         170 EYAKCLRLLATKVFKALSVGLGLEPDRLEKEVGGLEELLLQMKINYYPKCPQPELALGVEAHTDVSALTFILHNMVPGLQ  249 (349)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTSCTTHHHHHTTHHHHCEEEEEEEEECCCSSTTTCCSEEEECCCSSEEEEEECSCCCEE
T ss_pred             HHHHHHHHHHHhhhHHHHHHcCCCHHHHHHHhccccccceeeeecccccccchhhccccccCCCCcceEEEeccCCccee
Confidence            999999999999999999999999999988874   35578999999999988888999999999999999999999999


Q ss_pred             EeeCCCCCeEeecCCCCcEEEEcchHHHHhhCCCcccc--------ccceeeEEEEeeeCCCcce-ecC
Q 022556          236 ATKDNGKTWITVQPIEGAFVVNLGDHGHVSIYANTALI--------FLFLFILFYCFCLNHDVVL-SRL  295 (295)
Q Consensus       236 V~~~~g~~W~~V~~~~g~~vVnvGd~L~~~TnG~~~a~--------~~~R~S~~~F~~p~~d~~i-~~l  295 (295)
                      |+.++  +|++|+|.+|++|||+||+|++||||++|||        ..+|||++||++|+.|++| +||
T Consensus       250 v~~~g--~W~~V~p~~~a~vVNvGD~l~~~TnG~~~St~HRVv~~~~~~R~Si~~F~~p~~d~~i~~pl  316 (349)
T d1gp6a_         250 LFYEG--KWVTAKCVPDSIVMHIGDTLEILSNGKYKSILHRGLVNKEKVRISWAVFCEPPKDKIVLKPL  316 (349)
T ss_dssp             EEETT--EEEECCCCTTCEEEEECHHHHHHTTTSSCCCCEEECCCSSCCEEEEEEEEECCTTTCEECCC
T ss_pred             eecCC--ceEEccCCCCCeeeeHHhHHHHHhCCCccCcCccccCCCCCCeEEEEEEecCCCcceeecCC
Confidence            98764  9999999999999999999999999999999        6679999999999999875 776
>d1w9ya1 b.82.2.1 (A:2-308) 1-aminocyclopropane-1-carboxylate oxidase 1 {Petunia hybrida [TaxId: 4102]} Back     information, alignment and structure
>d1dcsa_ b.82.2.1 (A:) Deacetoxycephalosporin C synthase {Streptomyces clavuligerus [TaxId: 1901]} Back     information, alignment and structure
>d1odma_ b.82.2.1 (A:) Isopenicillin N synthase {Emericella nidulans [TaxId: 162425]} Back     information, alignment and structure
>d2iuwa1 b.82.2.10 (A:70-279) AlkB homolog 3 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2fdia1 b.82.2.10 (A:15-214) Alkylated DNA repair protein AlkB {Escherichia coli [TaxId: 562]} Back     information, alignment and structure