Citrus Sinensis ID: 022695


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290---
MALEASIDRRNHAQSATTNGAVVLPPASYRLRLNPSSEHKPDSYDDLHQLEFTPLLFSSLERYLPPTMLSMSRDVKFQYMRDILMKYSRDGERTRVQRHKEYRQRIISNYQPLHRELFTMHAPSVLVPAFVKAVRDNTEASFRSIMAEPIPGIYTFEMLQPRFCEMLLSEVENFERWVHDTRFRIMRPNTMNKFGAVLDDFGLETMLDKLMNDFIRPISKVFFPEVGGSTLDSHHGFVVEYGMDRDVELGFHVDDSEVTLNVCLGREFSGGELFFRGVRCDKHVNTETQSEVC
ccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHccccHHHccccHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccHHHHHHHcccHHHHHHHHcccccccEEEEEcccHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccHHHHHHHHHHHHHcHHHHHcccccccccccccEEEEEEEEccccccccccccccEEEEEEEcccccccccEEEEEEccccccccccccccc
cccccccccccccccccccccccccccHHHccccccccccccccccHHHccccHHHHHHHHHHcccHHccccHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHcccccccHHcccHHHcccHHHHHHHHHcHHHHHHcccccccccEEEEEcccHHHHHHHHHHHHHHcccccccccccccccccccccEEHHHcccHHHHHHHHHHHHHHHHHHHccccccccccHHcEEEEEEcccccccccccccccEEEEEEEEccccccccEEEEEEccccccccccccccc
MALEASIDRrnhaqsattngavvlppasyrlrlnpssehkpdsyddlhqleftPLLFSslerylpptmlsmsrdVKFQYMRDILMKYSRDGERTRVQRHKEYRQRIISNYQPLHRELftmhapsvlVPAFVKAVRDNTEASFRSimaepipgiytfemLQPRFCEMLLSEVENFERWVHDtrfrimrpntmnkfgavlddFGLETMLDKLMNDFirpiskvffpevggstldshhGFVVEygmdrdvelgfhvddseVTLNVClgrefsggelffrgvrcdkhvntetqsevc
maleasidrrnhaqsattngavvlppASYRLRLNPSSEHKPDSYDDLHQLEFTPLLFSSLERylpptmlsmsrdvKFQYMRDILMkysrdgertrvqrhKEYRQRIISNYQPLHRELFTMHAPSVLVPAFVKAVRDNTEASFrsimaepipgIYTFEMLQPRFCEMLLSEVENFERWVHDTrfrimrpntmnKFGAVLDDFGLETMLDKLMNDFIRPISKVFFPEVGGSTLDSHHGFVVEYGMDRDVELGFHVDDSEVTLNVCLGREFSGGELFFRGVRCdkhvntetqsevc
MALEASIDRRNHAQSATTNGAVVLPPASYRLRLNPSSEHKPDSYDDLHQLEFTPLLFSSLERYLPPTMLSMSRDVKFQYMRDILMKYSRDGERTRVQRHKEYRQRIISNYQPLHRELFTMHAPSVLVPAFVKAVRDNTEASFRSIMAEPIPGIYTFEMLQPRFCEMLLSEVENFERWVHDTRFRIMRPNTMNKFGAVLDDFGLETMLDKLMNDFIRPISKVFFPEVGGSTLDSHHGFVVEYGMDRDVELGFHVDDSEVTLNVCLGREFSGGELFFRGVRCDKHVNTETQSEVC
**********************************************LHQLEFTPLLFSSLERYLPPTMLSMSRDVKFQYMRDILMKYSRDG**TRVQRHKEYRQRIISNYQPLHRELFTMHAPSVLVPAFVKAVRDNTEASFRSIMAEPIPGIYTFEMLQPRFCEMLLSEVENFERWVHDTRFRIMRPNTMNKFGAVLDDFGLETMLDKLMNDFIRPISKVFFPEVGGSTLDSHHGFVVEYGMDRDVELGFHVDDSEVTLNVCLGREFSGGELFFRGVRCDKH**********
**************************************HKPDSYDDLHQLEFTPLLFSSLERYLPPTML***RDVKFQYMRDILMKYSRD*************QRIISNYQPLHRELFTMHAPSVLVPAFVKAVRDNTEASFRSIMAEPIPGIYTFEMLQPRFCEMLLSEVENFERWVH*********NTMNKFGAVLDDFGLETMLDKLMNDFIRPISKVFFPEVGGSTLDSHHGFVVEYGMDRDVELGFHVDDSEVTLNVCLGREFSGGELFFRGVRCDKHVNT*******
**************SATTNGAVVLPPASYRLRLNPSSEHKPDSYDDLHQLEFTPLLFSSLERYLPPTMLSMSRDVKFQYMRDILMKYSRDGERTRVQRHKEYRQRIISNYQPLHRELFTMHAPSVLVPAFVKAVRDNTEASFRSIMAEPIPGIYTFEMLQPRFCEMLLSEVENFERWVHDTRFRIMRPNTMNKFGAVLDDFGLETMLDKLMNDFIRPISKVFFPEVGGSTLDSHHGFVVEYGMDRDVELGFHVDDSEVTLNVCLGREFSGGELFFRGVRCDKHVN********
***************************SYRLRLNPSSEHKPDSYDDLHQLEFTPLLFSSLERYLPPTMLSMSRDVKFQYMRDILMKYSRDGERTRVQRHKEYRQRIISNYQPLHRELFTMHAPSVLVPAFVKAVRDNTEASFRSIMAEPIPGIYTFEMLQPRFCEMLLSEVENFERWVHDTRFRIMRPNTMNKFGAVLDDFGLETMLDKLMNDFIRPISKVFFPEVGGSTLDSHHGFVVEYGMDRDVELGFHVDDSEVTLNVCLGREFSGGELFFRGVRCDKHV*********
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MALEASIDRRNHAQSATTNGAVVLPPASYRLRLNPSSEHKPDSYDDLHQLEFTPLLFSSLERYLPPTMLSMSRDVKFQYMRDILMKYSRDGERTRVQRHKEYRQRIISNYQPLHRELFTMHAPSVLVPAFVKAVRDNTEASFRSIMAEPIPGIYTFEMLQPRFCEMLLSEVENFERWVHDTRFRIMRPNTMNKFGAVLDDFGLETMLDKLMNDFIRPISKVFFPEVGGSTLDSHHGFVVEYGMDRDVELGFHVDDSEVTLNVCLGREFSGGELFFRGVRCDKHVNTETQSEVC
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query293 2.2.26 [Sep-21-2011]
Q3ED68397 Uncharacterized PKHD-type no no 0.993 0.732 0.569 3e-96
Q28C22349 2-oxoglutarate and iron-d yes no 0.703 0.590 0.352 7e-29
A3KGZ2345 2-oxoglutarate and iron-d yes no 0.662 0.562 0.346 1e-27
Q9CQ04349 2-oxoglutarate and iron-d yes no 0.627 0.527 0.340 7e-26
Q6N063350 2-oxoglutarate and iron-d no no 0.621 0.52 0.343 3e-25
Q9R0B9737 Procollagen-lysine,2-oxog no no 0.481 0.191 0.288 2e-07
Q20679730 Procollagen-lysine,2-oxog yes no 0.484 0.194 0.270 7e-07
P24802730 Procollagen-lysine,2-oxog no no 0.501 0.201 0.267 1e-06
Q811A3737 Procollagen-lysine,2-oxog no no 0.481 0.191 0.282 2e-06
O00469737 Procollagen-lysine,2-oxog no no 0.481 0.191 0.275 4e-06
>sp|Q3ED68|Y1295_ARATH Uncharacterized PKHD-type hydroxylase At1g22950 OS=Arabidopsis thaliana GN=At1g22950 PE=2 SV=2 Back     alignment and function desciption
 Score =  351 bits (901), Expect = 3e-96,   Method: Compositional matrix adjust.
 Identities = 167/293 (56%), Positives = 224/293 (76%), Gaps = 2/293 (0%)

Query: 1   MALEASIDRRNHAQSATTNGAVVLPPASYRLRLNPSSEHKPDSYDDLHQLEFTPLLFSSL 60
           MAL++S  +    Q      +     A  +LR  P+ EH+P++Y+DL  L+++P LF+SL
Sbjct: 10  MALDSSGKQPEQQQQQQPRASSGNGEARLKLRRTPNEEHEPENYEDL-PLDYSPSLFTSL 68

Query: 61  ERYLPPTMLSMSRDVKFQYMRDILMKYSRDGERTRVQRHKEYRQRIISNYQPLHRELFTM 120
           ERYLP  +L+ +R  K  +MRD+L++YS D ER RV RHKEYR +I+S+YQ LH E++T+
Sbjct: 69  ERYLPEQLLNSTRIDKASFMRDLLLRYSPDTERVRVLRHKEYRDKIMSSYQRLHGEIYTL 128

Query: 121 HAPSVLVPAFVKAVRDNTEASFRSIMAEPIPGIYTFEMLQPRFCEMLLSEVENFERWVHD 180
              S   P+F+ A    +E +FRS M E  PGI+TFEM +P+FCEMLL+EVE+ E+WV+D
Sbjct: 129 DPSSFFAPSFLGAFSRKSEPNFRSSMVESYPGIFTFEMFKPQFCEMLLAEVEHMEKWVYD 188

Query: 181 TRFRIMRPNTMNKFGAVLDDFGLETMLDKLMNDFIRPISKVFFPEVGGSTLDSHHGFVVE 240
           +R  IMRPNTMN FG VLDDFG ++ML KL++DFI PI++V FPEV G++LDSHHG++VE
Sbjct: 189 SRSTIMRPNTMNNFGVVLDDFGFDSMLQKLVDDFISPIAQVLFPEVCGTSLDSHHGYIVE 248

Query: 241 YGMDRDVELGFHVDDSEVTLNVCLGREFSGGELFFRGVRCDKHVNTE-TQSEV 292
           YG DRDV+LGFHVDDSEV+LNVCLG++FSGGEL+FRGVRCDKHVN++ T+ EV
Sbjct: 249 YGKDRDVDLGFHVDDSEVSLNVCLGKQFSGGELYFRGVRCDKHVNSDSTEKEV 301





Arabidopsis thaliana (taxid: 3702)
EC: 1EC: .EC: 1EC: 4EC: .EC: 1EC: 1EC: .EC: -
>sp|Q28C22|OGFD2_XENTR 2-oxoglutarate and iron-dependent oxygenase domain-containing protein 2 OS=Xenopus tropicalis GN=ogfod2 PE=2 SV=1 Back     alignment and function description
>sp|A3KGZ2|OGFD2_DANRE 2-oxoglutarate and iron-dependent oxygenase domain-containing protein 2 OS=Danio rerio GN=ogfod2 PE=2 SV=1 Back     alignment and function description
>sp|Q9CQ04|OGFD2_MOUSE 2-oxoglutarate and iron-dependent oxygenase domain-containing protein 2 OS=Mus musculus GN=Ogfod2 PE=2 SV=1 Back     alignment and function description
>sp|Q6N063|OGFD2_HUMAN 2-oxoglutarate and iron-dependent oxygenase domain-containing protein 2 OS=Homo sapiens GN=OGFOD2 PE=2 SV=2 Back     alignment and function description
>sp|Q9R0B9|PLOD2_MOUSE Procollagen-lysine,2-oxoglutarate 5-dioxygenase 2 OS=Mus musculus GN=Plod2 PE=2 SV=2 Back     alignment and function description
>sp|Q20679|PLOD_CAEEL Procollagen-lysine,2-oxoglutarate 5-dioxygenase OS=Caenorhabditis elegans GN=let-268 PE=1 SV=1 Back     alignment and function description
>sp|P24802|PLOD1_CHICK Procollagen-lysine,2-oxoglutarate 5-dioxygenase 1 OS=Gallus gallus GN=PLOD1 PE=1 SV=1 Back     alignment and function description
>sp|Q811A3|PLOD2_RAT Procollagen-lysine,2-oxoglutarate 5-dioxygenase 2 OS=Rattus norvegicus GN=Plod2 PE=2 SV=1 Back     alignment and function description
>sp|O00469|PLOD2_HUMAN Procollagen-lysine,2-oxoglutarate 5-dioxygenase 2 OS=Homo sapiens GN=PLOD2 PE=1 SV=2 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query293
449458771384 PREDICTED: uncharacterized PKHD-type hyd 0.989 0.755 0.737 1e-130
255570701379 oxidoreductase, putative [Ricinus commun 0.918 0.709 0.760 1e-125
225424112379 PREDICTED: uncharacterized PKHD-type hyd 0.989 0.765 0.695 1e-123
255567788 411 oxidoreductase, putative [Ricinus commun 0.901 0.642 0.769 1e-122
359490986 395 PREDICTED: uncharacterized PKHD-type hyd 0.989 0.734 0.685 1e-121
356520629370 PREDICTED: uncharacterized PKHD-type hyd 0.941 0.745 0.694 1e-114
224135445391 predicted protein [Populus trichocarpa] 0.972 0.728 0.687 1e-113
356531172379 PREDICTED: uncharacterized PKHD-type hyd 0.986 0.762 0.675 1e-113
388494122 395 unknown [Medicago truncatula] 0.969 0.718 0.659 1e-112
217075767 395 unknown [Medicago truncatula] 0.969 0.718 0.659 1e-112
>gi|449458771|ref|XP_004147120.1| PREDICTED: uncharacterized PKHD-type hydroxylase At1g22950-like [Cucumis sativus] gi|449503401|ref|XP_004161984.1| PREDICTED: uncharacterized PKHD-type hydroxylase At1g22950-like [Cucumis sativus] Back     alignment and taxonomy information
 Score =  469 bits (1206), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 219/297 (73%), Positives = 264/297 (88%), Gaps = 7/297 (2%)

Query: 1   MALEASIDRRNHAQS-ATTNGAVVLPP-----ASYRLRLNPSSEHKPDSYDDLHQLEFTP 54
           M+LEAS++RR   Q+  T NG  V+ P     +++RLRL P  +HK +SY+DL QLEF+P
Sbjct: 1   MSLEASLERRKQPQAPGTGNGNGVVSPTPQSLSTHRLRLQPKEDHKSESYEDL-QLEFSP 59

Query: 55  LLFSSLERYLPPTMLSMSRDVKFQYMRDILMKYSRDGERTRVQRHKEYRQRIISNYQPLH 114
           +LFS LER+LPP ML+++R+VK QYMRDIL++Y+ +GER RVQRH+EYRQ+IISNYQPLH
Sbjct: 60  VLFSMLERHLPPNMLNVAREVKLQYMRDILLRYAPEGERNRVQRHREYRQKIISNYQPLH 119

Query: 115 RELFTMHAPSVLVPAFVKAVRDNTEASFRSIMAEPIPGIYTFEMLQPRFCEMLLSEVENF 174
           REL++MHA +  VP+F+KA+ +N+E SFR IM+EP PGIY FEMLQP+FCE LLSEVE+F
Sbjct: 120 RELYSMHAANFFVPSFLKAINENSEESFRRIMSEPSPGIYKFEMLQPQFCEKLLSEVESF 179

Query: 175 ERWVHDTRFRIMRPNTMNKFGAVLDDFGLETMLDKLMNDFIRPISKVFFPEVGGSTLDSH 234
           ERWVH+T+FRIMRPNTMNK+GAVLDDFGLETMLDKLM+DFIRPIS+VFFPEVGG+TLDSH
Sbjct: 180 ERWVHETKFRIMRPNTMNKYGAVLDDFGLETMLDKLMDDFIRPISRVFFPEVGGATLDSH 239

Query: 235 HGFVVEYGMDRDVELGFHVDDSEVTLNVCLGREFSGGELFFRGVRCDKHVNTETQSE 291
           HGFVVEYG+DRDVELGFHVDDSEVTLNVCLG++FSGGELFFRG+RCDKHVNTETQSE
Sbjct: 240 HGFVVEYGIDRDVELGFHVDDSEVTLNVCLGKQFSGGELFFRGIRCDKHVNTETQSE 296




Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255570701|ref|XP_002526305.1| oxidoreductase, putative [Ricinus communis] gi|223534386|gb|EEF36094.1| oxidoreductase, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|225424112|ref|XP_002283582.1| PREDICTED: uncharacterized PKHD-type hydroxylase At1g22950 [Vitis vinifera] gi|297737750|emb|CBI26951.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|255567788|ref|XP_002524872.1| oxidoreductase, putative [Ricinus communis] gi|223535835|gb|EEF37496.1| oxidoreductase, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|359490986|ref|XP_002277437.2| PREDICTED: uncharacterized PKHD-type hydroxylase At1g22950-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|356520629|ref|XP_003528963.1| PREDICTED: uncharacterized PKHD-type hydroxylase At1g22950-like [Glycine max] Back     alignment and taxonomy information
>gi|224135445|ref|XP_002322075.1| predicted protein [Populus trichocarpa] gi|222869071|gb|EEF06202.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|356531172|ref|XP_003534152.1| PREDICTED: uncharacterized PKHD-type hydroxylase At1g22950-like [Glycine max] Back     alignment and taxonomy information
>gi|388494122|gb|AFK35127.1| unknown [Medicago truncatula] Back     alignment and taxonomy information
>gi|217075767|gb|ACJ86243.1| unknown [Medicago truncatula] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query293
TAIR|locus:2092727394 AT3G18210 [Arabidopsis thalian 0.959 0.713 0.647 2.6e-102
TAIR|locus:2017774397 AT1G22950 [Arabidopsis thalian 0.993 0.732 0.569 1.1e-89
TAIR|locus:2158327410 AT5G43660 [Arabidopsis thalian 0.979 0.7 0.493 3.1e-74
TAIR|locus:2008189291 AT1G48700 [Arabidopsis thalian 0.672 0.676 0.538 4e-58
DICTYBASE|DDB_G0270778417 DDB_G0270778 "putative prolyl 0.641 0.450 0.334 1.9e-28
ZFIN|ZDB-GENE-061215-54345 zgc:158437 "zgc:158437" [Danio 0.696 0.591 0.342 1.9e-28
UNIPROTKB|F1NPS1350 F1NPS1 "Uncharacterized protei 0.679 0.568 0.342 8.2e-28
MGI|MGI:1913877349 Ogfod2 "2-oxoglutarate and iro 0.627 0.527 0.340 7.3e-27
UNIPROTKB|E2QZH8351 OGFOD2 "Uncharacterized protei 0.662 0.552 0.341 9.4e-27
RGD|1310594349 Ogfod2 "2-oxoglutarate and iro 0.662 0.555 0.338 1.5e-26
TAIR|locus:2092727 AT3G18210 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1014 (362.0 bits), Expect = 2.6e-102, P = 2.6e-102
 Identities = 184/284 (64%), Positives = 237/284 (83%)

Query:     9 RRNHAQSATTNGAVVLPPASYRLRLNPSSEHKPDSYDDLHQLEFTPLLFSSLERYLPPTM 68
             + +H+ + TT  A     +  RLRLNP++EH+PDSY+DL QL+F   ++SSLE+YLPP M
Sbjct:    26 QNSHSAAPTTLRATSTMVSCQRLRLNPNNEHRPDSYEDL-QLDFPNSVYSSLEKYLPPNM 84

Query:    69 LSMSRDVKFQYMRDILMKYSRDGERTRVQRHKEYRQRIISNYQPLHRELFTMHAPSV-LV 127
             L  +RD K ++M DI++++   GER+R QRH +YR +I +NYQPLH+EL+T+  P+V  V
Sbjct:    85 LVSNRDEKIKFMTDIMLRHLPHGERSRAQRHSDYRLKITTNYQPLHKELYTL-VPTVCFV 143

Query:   128 PAFVKAVRDNTEASFRSIMAEPIPGIYTFEMLQPRFCEMLLSEVENFERWVHDTRFRIMR 187
             PAF+KA+ +NTE SFR+I++EP PG++ F+MLQP FCEM+L+E++NFERWV +T+FRIMR
Sbjct:   144 PAFLKAINENTEESFRNIISEPSPGVFVFDMLQPSFCEMMLAEIDNFERWVGETKFRIMR 203

Query:   188 PNTMNKFGAVLDDFGLETMLDKLMNDFIRPISKVFFPEVGGSTLDSHHGFVVEYGMDRDV 247
             PNTMNK+GAVLDDFGL+TMLDKLM  FIRPISKVFF +VGG+TLDSHHGFVVEYG DRDV
Sbjct:   204 PNTMNKYGAVLDDFGLDTMLDKLMEGFIRPISKVFFSDVGGATLDSHHGFVVEYGKDRDV 263

Query:   248 ELGFHVDDSEVTLNVCLGREFSGGELFFRGVRCDKHVNTETQSE 291
             +LGFHVDDSEVTLNVCLG +F GGELFFRG RC+KHVNT T+++
Sbjct:   264 DLGFHVDDSEVTLNVCLGNQFVGGELFFRGTRCEKHVNTATKAD 307




GO:0005506 "iron ion binding" evidence=IEA
GO:0005634 "nucleus" evidence=ISM
GO:0016705 "oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen" evidence=IEA
GO:0031418 "L-ascorbic acid binding" evidence=IEA
GO:0055114 "oxidation-reduction process" evidence=IEA
TAIR|locus:2017774 AT1G22950 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2158327 AT5G43660 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2008189 AT1G48700 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
DICTYBASE|DDB_G0270778 DDB_G0270778 "putative prolyl 4-hydroxylase alpha subunit" [Dictyostelium discoideum (taxid:44689)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-061215-54 zgc:158437 "zgc:158437" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
UNIPROTKB|F1NPS1 F1NPS1 "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
MGI|MGI:1913877 Ogfod2 "2-oxoglutarate and iron-dependent oxygenase domain containing 2" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
UNIPROTKB|E2QZH8 OGFOD2 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
RGD|1310594 Ogfod2 "2-oxoglutarate and iron-dependent oxygenase domain containing 2" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer1.14.11LOW CONFIDENCE prediction!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Fail to connect to STRING server


Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query293
smart00702165 smart00702, P4Hc, Prolyl 4-hydroxylase alpha subun 4e-17
>gnl|CDD|214780 smart00702, P4Hc, Prolyl 4-hydroxylase alpha subunit homologues Back     alignment and domain information
 Score = 76.7 bits (189), Expect = 4e-17
 Identities = 35/129 (27%), Positives = 46/129 (35%), Gaps = 13/129 (10%)

Query: 160 QPRFCEMLLSEVENFERWVHDTRFRIMRPNTMNKFGAVLDDFGLETMLDK--LMNDFIRP 217
            P  C+ LL E E    W  +    I  PN  ++        G    L +  L+ + IR 
Sbjct: 1   SPAECQKLLEEAEPLG-WRGEVTRGIGNPNETSQ---YRQSNGTWLELLERDLVIERIRQ 56

Query: 218 ISKVFFPEVGGSTLDSHHGFVVEYGMDRDVELGFHVD-----DSEVTLNVCLGREFSGGE 272
               F   + G  L +    V  YG       G HVD     D   T  + L     GGE
Sbjct: 57  RLADFLGLLAGLPLSAEDAQVARYG--PGGHYGPHVDNFLYGDRIATFILYLNDVEEGGE 114

Query: 273 LFFRGVRCD 281
           L F G+R  
Sbjct: 115 LVFPGLRLM 123


Mammalian enzymes catalyse hydroxylation of collagen, for example. Prokaryotic enzymes might catalyse hydroxylation of antibiotic peptides. These are 2-oxoglutarate-dependent dioxygenases, requiring 2-oxoglutarate and dioxygen as cosubstrates and ferrous iron as a cofactor. Length = 165

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 293
KOG1971415 consensus Lysyl hydroxylase [Posttranslational mod 100.0
KOG1971415 consensus Lysyl hydroxylase [Posttranslational mod 99.58
smart00702178 P4Hc Prolyl 4-hydroxylase alpha subunit homologues 98.83
PRK05467226 Fe(II)-dependent oxygenase superfamily protein; Pr 98.06
PF0317198 2OG-FeII_Oxy: 2OG-Fe(II) oxygenase superfamily Ent 94.85
PLN00052 310 prolyl 4-hydroxylase; Provisional 93.73
PF1366170 2OG-FeII_Oxy_4: 2OG-Fe(II) oxygenase superfamily 91.01
PF13640100 2OG-FeII_Oxy_3: 2OG-Fe(II) oxygenase superfamily; 85.8
PHA02869 418 C4L/C10L-like gene family protein; Provisional 83.12
>KOG1971 consensus Lysyl hydroxylase [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
Probab=100.00  E-value=1.7e-49  Score=384.66  Aligned_cols=264  Identities=33%  Similarity=0.461  Sum_probs=256.8

Q ss_pred             cccccccCCCCCCCCCCccccccCCCChhHHHHHhhhCCccccCCCHHHHHHHHHHHHHHhCccchhhhhhhhHHHhhhh
Q 022695           27 ASYRLRLNPSSEHKPDSYDDLHQLEFTPLLFSSLERYLPPTMLSMSRDVKFQYMRDILMKYSRDGERTRVQRHKEYRQRI  106 (293)
Q Consensus        27 ~~~rl~~~p~~~h~~~~y~d~~~~~~~~~~~~~le~~lp~~~~~~~r~~k~~~~~~il~~~~~~~eR~r~~~~~e~~~~I  106 (293)
                      ++.++.+.|+.+|.+++|+|+ +|+|+++..++||.|+|+.+|++.++.|+|||.++|.+|+|..++.++..+..|+++|
T Consensus        30 ni~ld~~~~~fq~l~g~~~dv-~Lkf~~~~~~~ln~~~pt~~l~~~~n~~~K~~~d~l~nY~~r~~~~~~l~~~~~r~~~  108 (415)
T KOG1971|consen   30 NITLDHRSRIFQNLNGAYEDV-VLKFSSGQVRALNVAYPTLPLTVHGNGPAKFMLDYLGNYIPREWTGCSLCCKNYRELI  108 (415)
T ss_pred             cccccCcCcccccCcCCcCCe-eEecccCchhhhhhcCCCcceeeccCccHHHHHHHHhhhcchhhhhhhccccccchhh
Confidence            446899999999999999999 9999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhcCCCCCccccccCCCCCCChhHHHHHhhhcHHhhhhhccccCCceeEeecCCHHHHHHHHHHHHhhhhhcccCCCCcc
Q 022695          107 ISNYQPLHRELFTMHAPSVLVPAFVKAVRDNTEASFRSIMAEPIPGIYTFEMLQPRFCEMLLSEVENFERWVHDTRFRIM  186 (293)
Q Consensus       107 ~~~Y~plhpdLy~l~pe~yl~p~f~~ai~~~tee~~~~~~~ep~PdVY~FP~ft~~FC~~LieE~E~f~~Ws~gs~~p~~  186 (293)
                      .++||+|+-..|.++|+.++.|+|..+...++++.|+++.+|+.|++|.||||++.||+++++|||+|++|+.+++.+++
T Consensus       109 ~s~~q~l~~~~Y~~dp~~l~i~n~~~~~~~~~~~~~~~~~~e~~p~~~v~~~~~~~~~ea~~~evE~~r~~~~dad~~i~  188 (415)
T KOG1971|consen  109 KSNLQRLLELDYPLDPENLFIPNFEVAHSANIKEFFRRHGSEYSPGKFVFPMFQPDFSEARLMEVEHFRKFSVDADFVIT  188 (415)
T ss_pred             hhccccchhccCCCCHHHhccccccccchhccHHHHHHhccccCCeeEEeeccCccHHHHHHHHHHHhhhcccccceecc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCCCcccccccc--ChHHHHHHHHHHhhchhhh---------------------hcCCCCCCCCCcceeeeEEEEec
Q 022695          187 RPNTMNKFGAVLDDF--GLETMLDKLMNDFIRPISK---------------------VFFPEVGGSTLDSHHGFVVEYGM  243 (293)
Q Consensus       187 RPn~mN~YGvVL~~i--G~e~~~~~ll~~yi~Pl~~---------------------~lfp~~~g~~ldsh~~FVVrY~~  243 (293)
                      |||+|++||++++++  ||..+..+|.++|+.||++                     .+||.++|..||+|++|+|+|..
T Consensus       189 ~P~~~~~li~~~k~~ia~l~~~~~kL~enF~~al~~~~yyars~dy~~~v~g~~vg~~~~P~v~~~yl~~~~~f~~e~~~  268 (415)
T KOG1971|consen  189 RPNTLRNLIVLNKEFIAPLVSRHGKLWENFWGALSADGYYARSEDYVDIVQGNRVGVWNVPYVCGAYLDSHDAFRVESSE  268 (415)
T ss_pred             CChhHHHHHHHhhhccchhhhhhHHHHHHhhhhhccccchhhhhhhhhhhcccceeEEeecccceeEEecccceeeeccC
Confidence            999999999999999  9999999999999999999                     99999999999999999999966


Q ss_pred             C-CCCCCcccccCCceeeEeecCCCccCCceEeceecccccccCCCCCCC
Q 022695          244 D-RDVELGFHVDDSEVTLNVCLGREFSGGELFFRGVRCDKHVNTETQSEV  292 (293)
Q Consensus       244 ~-~d~~L~~H~D~SevTlNV~LgkdFeGGgl~F~g~~c~~h~~~~~~~ee  292 (293)
                      + .|+++++|+|++++|+||||+++|+||.++|.+.+|++|+++ .+++|
T Consensus       269 ~~~Dpdm~~~~~~~e~~l~v~l~nq~~gG~L~~~~~~~~~h~~~-~~~~E  317 (415)
T KOG1971|consen  269 DNRDPDMGFCVDAREVGLFVCLSNQFEGGELLFTGKYCTKHLRT-DDLWE  317 (415)
T ss_pred             cCCCCccccccchhhcceeEEecccccCCeeEeeccccccccCC-Cchhh
Confidence            5 999999999999999999999999999999999999999999 65554



>KOG1971 consensus Lysyl hydroxylase [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>smart00702 P4Hc Prolyl 4-hydroxylase alpha subunit homologues Back     alignment and domain information
>PRK05467 Fe(II)-dependent oxygenase superfamily protein; Provisional Back     alignment and domain information
>PF03171 2OG-FeII_Oxy: 2OG-Fe(II) oxygenase superfamily Entry for Lysyl hydrolases This Prosite entry is a sub-family of the Pfam entry; InterPro: IPR005123 This domain is found in members of the 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily [], as well as the C-terminal of prolyl 4-hydroxylase alpha subunit Back     alignment and domain information
>PLN00052 prolyl 4-hydroxylase; Provisional Back     alignment and domain information
>PF13661 2OG-FeII_Oxy_4: 2OG-Fe(II) oxygenase superfamily Back     alignment and domain information
>PF13640 2OG-FeII_Oxy_3: 2OG-Fe(II) oxygenase superfamily; PDB: 3DKQ_B 3GZE_D 3HQR_A 2Y34_A 2G1M_A 2G19_A 3OUI_A 3OUJ_A 2HBU_A 2Y33_A Back     alignment and domain information
>PHA02869 C4L/C10L-like gene family protein; Provisional Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

No hit with e-value below 0.005

Structure Templates Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query293
3itq_A216 Prolyl 4-hydroxylase, alpha subunit domain protei; 97.03
3dkq_A243 PKHD-type hydroxylase SBAL_3634; putative oxygenas 96.68
2jig_A224 Prolyl-4 hydroxylase; hydrolase; HET: PD2; 1.85A { 96.01
2hbt_A247 EGL nine homolog 1; prolyl hydroxylase, hypoxia in 88.58
>3itq_A Prolyl 4-hydroxylase, alpha subunit domain protei; double-stranded beta helix, alpha-keto dependent non-heme iron oxygenase; 1.40A {Bacillus anthracis str} Back     alignment and structure
Probab=97.03  E-value=0.0026  Score=56.67  Aligned_cols=117  Identities=23%  Similarity=0.309  Sum_probs=67.9

Q ss_pred             CCceeEee-cCCHHHHHHHHHHHHh-hhhhcccCCCCccCCCCCCCccccccccChHHHHHHHHHHhhchhhhhcCCCCC
Q 022695          150 IPGIYTFE-MLQPRFCEMLLSEVEN-FERWVHDTRFRIMRPNTMNKFGAVLDDFGLETMLDKLMNDFIRPISKVFFPEVG  227 (293)
Q Consensus       150 ~PdVY~FP-~ft~~FC~~LieE~E~-f~~Ws~gs~~p~~RPn~mN~YGvVL~~iG~e~~~~~ll~~yi~Pl~~~lfp~~~  227 (293)
                      .|.|+.++ +||++.|+.|++..+. +..-.-+.+..  ....-+-.++.|++   +... .-+.+.|..++-.  | ..
T Consensus        38 ~P~i~~~~~fLs~~Ec~~Li~~a~~~l~~s~v~~~~~--~~~~RtS~~~wl~~---~~~v-~~i~~Ri~~~~gl--~-~~  108 (216)
T 3itq_A           38 EPLIVVLGNVLSDEECDELIELSKSKLARSKVGSSRD--VNDIRTSSGAFLDD---NELT-AKIEKRISSIMNV--P-AS  108 (216)
T ss_dssp             TTTEEEEESCSCHHHHHHHHHHHHHHHC--------C--CCCGGGTTCEECCC---CHHH-HHHHHHHHHHHTS--C-GG
T ss_pred             CCCEEEECCcCCHHHHHHHHHHhhcccccceeccCCc--cCCcEeeeeEEeCC---cHHH-HHHHHHHHHhcCc--e-ec
Confidence            68999988 9999999999999885 33311001100  00111112444554   2221 2222333333221  1 00


Q ss_pred             CCCCcceeeeEEEEecCCCCCCcccccCCc-----------eeeEeecCCCccCCceEeceeccc
Q 022695          228 GSTLDSHHGFVVEYGMDRDVELGFHVDDSE-----------VTLNVCLGREFSGGELFFRGVRCD  281 (293)
Q Consensus       228 g~~ldsh~~FVVrY~~~~d~~L~~H~D~Se-----------vTlNV~LgkdFeGGgl~F~g~~c~  281 (293)
                          ..-...+++|.+++  ...+|+|...           +|+-+-|++.++||++.|.....+
T Consensus       109 ----~~E~lqv~~Y~~G~--~y~~H~D~~~~~~~~~~~~R~~T~l~YLnd~~~GGeT~Fp~~~~~  167 (216)
T 3itq_A          109 ----HGEGLHILNYEVDQ--QYKAHYDYFAEHSRSAANNRISTLVMYLNDVEEGGETFFPKLNLS  167 (216)
T ss_dssp             ----GBCCCEEEEECBTC--CEEEECSSCCTTSGGGGGCEEEEEEEECSCCSEECCEEETTTTEE
T ss_pred             ----cccceeEEEeCCCC--ccccccCCCcCCCcccCCceEEEEEEecccCCcCceeEecCCCCE
Confidence                11234699998874  4688998643           899999999999999999765433



>3dkq_A PKHD-type hydroxylase SBAL_3634; putative oxygenase, structural genomics, JOI for structural genomics, JCSG; 2.26A {Shewanella baltica OS155} Back     alignment and structure
>2jig_A Prolyl-4 hydroxylase; hydrolase; HET: PD2; 1.85A {Chlamydomonas reinhardtii} PDB: 3gze_A 2v4a_A 2jij_A Back     alignment and structure
>2hbt_A EGL nine homolog 1; prolyl hydroxylase, hypoxia inducible factor, HIF, 2- oxoglutarate, oxygenase, oxidoreductase; HET: UN9; 1.60A {Homo sapiens} PDB: 2hbu_A* 2g1m_A* 3hqu_A* 3hqr_A* 2y33_A* 2y34_A* 2g19_A* 3ouj_A* 3ouh_A* 3oui_A* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

No hit with probability above 80.00