Citrus Sinensis ID: 022696

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290---
MASFLWTLCLSALFLASGVISAPPKRPIDVPFGRNYVPTWAFDHIKYFNGGSEIQLVLDKYTGTGFQSKGSYLFGHFSMHIKMVPGDSAGTVTAFYLSSQNSEHDEIDFEFLGNRTGQPYILQTNVYTGGKGDKEQRIYLWFDPTKEFHTYSVLWNMYQIVFLVDDVPIRVFKNSKDLGVRFPFNQPMKIYSSLWNADDWATRGGLEKTDWSKAPFIASYKGFHVDGCEVSVNAKFCETQGKRWWDQKAFQDLDAYQYRRLRWVRQKYTIYNYCNDRARFPTPSPECKRDRDI
ccHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccEEEEccccEEEEEEccccccEEEEccEEEEEEEEEEEEEccccccEEEEEEEEEccccccccEEEEEEccccccccEEEEEEEEccccccEEEEEcccccccccEEEEEEEcccEEEEEEccEEEEEEEcccccccccccccccEEEEEEcccccccccccEEEcccccccEEEEEcEEEEEEEEcccccccccccccccccccccccccHHHHHHHHHHccccEEEEEcccccccccccccccccccc
cccHHHHHHHHHHHHHHHHHHHccccccccccccccEEEEccccEEEEccccEEEEEEEccccccccccccEEEEEEEEEEEEcccccccEEEEEEEccccccccEEEEEEccccccccEEEEEEEEEccEccccEEEEccccHHHccEEEEEEEEccEEEEEEccEcEEEEEccHHcccccccccccEEEEEccccccHccccccEEcccccccEEEEEcccccccEEcccccccccccccccccHHHHHHccHHHHHHHHHHHHccEEEEccccccccccccccccccccc
MASFLWTLCLSALFLAsgvisappkrpidvpfgrnyvptwafdhikyfnggSEIQLVLDKytgtgfqskgsylfgHFSMHikmvpgdsagTVTAFYLSsqnsehdeidfeflgnrtgqpyilqtnvytggkgdkeqriylwfdptkefhTYSVLWNMYQIVFLVddvpirvfknskdlgvrfpfnqpmkIYSSlwnaddwatrgglektdwskapfiasykgfhvdgcevsvnAKFCetqgkrwwdqkaFQDLDAYQYRRLRWVRQKYTIYNycndrarfptpspeckrdrdi
MASFLWTLCLSALFLASGVISAPPKRPIDVPFGRNYVPTWAFDHIKYFNGGSEIQLVLDKYTGTGFQSKGSYLFGHFSMHIKMVPGDSAGTVTAFYLSSQNSEHDEIDFEFLGNRTGQPYILQTNVYTGGKGDKEQRIYLWFDPTKEFHTYSVLWNMYQIVFLVDDVPIRVFKNskdlgvrfpfnQPMKIYSSLWNADDWATRGGLEKTDWSKAPFIASYKGFHVDGCEVSVNAKFCEtqgkrwwdqkafqdldayqyrrLRWVRQKYTIynycndrarfptpspeckrdrdi
MASFLWTLCLSALFLASGVISAPPKRPIDVPFGRNYVPTWAFDHIKYFNGGSEIQLVLDKYTGTGFQSKGSYLFGHFSMHIKMVPGDSAGTVTAFYLSSQNSEHDEIDFEFLGNRTGQPYILQTNVYTGGKGDKEQRIYLWFDPTKEFHTYSVLWNMYQIVFLVDDVPIRVFKNSKDLGVRFPFNQPMKIYSSLWNADDWATRGGLEKTDWSKAPFIASYKGFHVDGCEVSVNAKFCETQGKRWWDQKAFQDLDAYQYRRLRWVRQKYTIYNYCNDRARFPTPSPECKRDRDI
***FLWTLCLSALFLASGVISAPPKRPIDVPFGRNYVPTWAFDHIKYFNGGSEIQLVLDKYTGTGFQSKGSYLFGHFSMHIKMVPGDSAGTVTAFYLSSQNSEHDEIDFEFLGNRTGQPYILQTNVYTGGKGDKEQRIYLWFDPTKEFHTYSVLWNMYQIVFLVDDVPIRVFKNSKDLGVRFPFNQPMKIYSSLWNADDWATRGGLEKTDWSKAPFIASYKGFHVDGCEVSVNAKFCETQGKRWWDQKAFQDLDAYQYRRLRWVRQKYTIYNYCNDRA***************
***FLWTLCLSALFLASGVISAPPKRPIDVPFGRNYVPTWAFDHIKYFNGGSEIQLVLDKYTGTGFQSKGSYLFGHFSMHIKMVPGDSAGTVTAFYLSSQNSEHDEIDFEFLGNRTGQPYILQTNVYTGGKGDKEQRIYLWFDPTKEFHTYSVLWNMYQIVFLVDDVPIRVFKNSKDLGVRFPFNQPMKIYSSLWNADDWATRGGLEKTDWSKAPFIASYKGFHVDGCEVSV**********************AYQYRRLRWVRQKYTIYNYCNDRARFPTPSPECKR****
MASFLWTLCLSALFLASGVISAPPKRPIDVPFGRNYVPTWAFDHIKYFNGGSEIQLVLDKYTGTGFQSKGSYLFGHFSMHIKMVPGDSAGTVTAFYLSSQNSEHDEIDFEFLGNRTGQPYILQTNVYTGGKGDKEQRIYLWFDPTKEFHTYSVLWNMYQIVFLVDDVPIRVFKNSKDLGVRFPFNQPMKIYSSLWNADDWATRGGLEKTDWSKAPFIASYKGFHVDGCEVSVNAKFCETQGKRWWDQKAFQDLDAYQYRRLRWVRQKYTIYNYCNDRARFP************
*ASFLWTLCLSALFLASGVISAPPKRPIDVPFGRNYVPTWAFDHIKYFNGGSEIQLVLDKYTGTGFQSKGSYLFGHFSMHIKMVPGDSAGTVTAFYLSSQNSEHDEIDFEFLGNRTGQPYILQTNVYTGGKGDKEQRIYLWFDPTKEFHTYSVLWNMYQIVFLVDDVPIRVFKNSKDLGVRFPFNQPMKIYSSLWNADDWATRGGLEKTDWSKAPFIASYKGFHVDGCEVSVNAKFCETQGKRWWDQKAFQDLDAYQYRRLRWVRQKYTIYNYCNDRARFPTPSPECK*****
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
SSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHooooooooo
SSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MASFLWTLCLSALFLASGVISAPPKRPIDVPFGRNYVPTWAFDHIKYFNGGSEIQLVLDKYTGTGFQSKGSYLFGHFSMHIKMVPGDSAGTVTAFYLSSQNSEHDEIDFEFLGNRTGQPYILQTNVYTGGKGDKEQRIYLWFDPTKEFHTYSVLWNMYQIVFLVDDVPIRVFKNSKDLGVRFPFNQPMKIYSSLWNADDWATRGGLEKTDWSKAPFIASYKGFHVDGCEVSVNAKFCETQGKRWWDQKAFQDLDAYQYRRLRWVRQKYTIYNYCNDRARFPTPSPECKRDRDI
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query293 2.2.26 [Sep-21-2011]
Q9XIW1293 Probable xyloglucan endot yes no 1.0 1.0 0.829 1e-150
Q8LNZ5293 Probable xyloglucan endot N/A no 1.0 1.0 0.815 1e-148
Q41638292 Xyloglucan endotransgluco N/A no 0.996 1.0 0.829 1e-145
Q39857295 Probable xyloglucan endot no no 0.986 0.979 0.841 1e-144
Q6YDN9295 Xyloglucan endotransgluco N/A no 1.0 0.993 0.757 1e-138
Q39099296 Xyloglucan endotransgluco no no 0.969 0.959 0.777 1e-138
Q41542293 Probable xyloglucan endot N/A no 0.935 0.935 0.791 1e-135
P93349295 Probable xyloglucan endot N/A no 0.993 0.986 0.725 1e-127
Q40144296 Probable xyloglucan endot N/A no 0.993 0.983 0.705 1e-126
Q8LF99292 Probable xyloglucan endot no no 0.965 0.969 0.533 8e-88
>sp|Q9XIW1|XTH5_ARATH Probable xyloglucan endotransglucosylase/hydrolase protein 5 OS=Arabidopsis thaliana GN=XTH5 PE=2 SV=1 Back     alignment and function desciption
 Score =  529 bits (1363), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 243/293 (82%), Positives = 265/293 (90%)

Query: 1   MASFLWTLCLSALFLASGVISAPPKRPIDVPFGRNYVPTWAFDHIKYFNGGSEIQLVLDK 60
           M     TLCL+ L LA+     PPK+ I+VPFGRNY PTWAFDHIKY NGGSE+ LVLDK
Sbjct: 1   MGRLSSTLCLTFLILATVAFGVPPKKSINVPFGRNYFPTWAFDHIKYLNGGSEVHLVLDK 60

Query: 61  YTGTGFQSKGSYLFGHFSMHIKMVPGDSAGTVTAFYLSSQNSEHDEIDFEFLGNRTGQPY 120
           YTGTGFQSKGSYLFGHFSMHIKMV GDSAGTVTAFYLSSQNSEHDEIDFEFLGNRTGQPY
Sbjct: 61  YTGTGFQSKGSYLFGHFSMHIKMVAGDSAGTVTAFYLSSQNSEHDEIDFEFLGNRTGQPY 120

Query: 121 ILQTNVYTGGKGDKEQRIYLWFDPTKEFHTYSVLWNMYQIVFLVDDVPIRVFKNSKDLGV 180
           ILQTNV+TGG G++EQRI LWFDP+K++H+YSVLWNMYQIVF VDDVPIRVFKNSKD+GV
Sbjct: 121 ILQTNVFTGGAGNREQRINLWFDPSKDYHSYSVLWNMYQIVFFVDDVPIRVFKNSKDVGV 180

Query: 181 RFPFNQPMKIYSSLWNADDWATRGGLEKTDWSKAPFIASYKGFHVDGCEVSVNAKFCETQ 240
           +FPFNQPMKIYSSLWNADDWATRGGLEKT+W KAPF+ASY+GFHVDGCE SVNAKFCETQ
Sbjct: 181 KFPFNQPMKIYSSLWNADDWATRGGLEKTNWEKAPFVASYRGFHVDGCEASVNAKFCETQ 240

Query: 241 GKRWWDQKAFQDLDAYQYRRLRWVRQKYTIYNYCNDRARFPTPSPECKRDRDI 293
           GKRWWDQK FQDLDA QY+RL+WVR++YTIYNYC DR RFP P PEC+RDRDI
Sbjct: 241 GKRWWDQKEFQDLDANQYKRLKWVRKRYTIYNYCTDRVRFPVPPPECRRDRDI 293
Catalyzes xyloglucan endohydrolysis (XEH) and/or endotransglycosylation (XET). Cleaves and religates xyloglucan polymers, an essential constituent of the primary cell wall, and thereby participates in cell wall construction of growing tissues.
Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 4EC: .EC: 1EC: .EC: 2EC: 0EC: 7
>sp|Q8LNZ5|XTHB_PHAAN Probable xyloglucan endotransglucosylase/hydrolase protein B OS=Phaseolus angularis GN=XTHB PE=2 SV=1 Back     alignment and function description
>sp|Q41638|XTHA_PHAAN Xyloglucan endotransglucosylase/hydrolase protein A OS=Phaseolus angularis GN=XTHA PE=1 SV=1 Back     alignment and function description
>sp|Q39857|XTH_SOYBN Probable xyloglucan endotransglucosylase/hydrolase (Fragment) OS=Glycine max GN=XTH PE=2 SV=1 Back     alignment and function description
>sp|Q6YDN9|XTH_BRAOB Xyloglucan endotransglucosylase/hydrolase OS=Brassica oleracea var. botrytis GN=XET16A PE=1 SV=1 Back     alignment and function description
>sp|Q39099|XTH4_ARATH Xyloglucan endotransglucosylase/hydrolase protein 4 OS=Arabidopsis thaliana GN=XTH4 PE=1 SV=1 Back     alignment and function description
>sp|Q41542|XTH_WHEAT Probable xyloglucan endotransglucosylase/hydrolase OS=Triticum aestivum GN=XTH PE=2 SV=1 Back     alignment and function description
>sp|P93349|XTH_TOBAC Probable xyloglucan endotransglucosylase/hydrolase protein OS=Nicotiana tabacum GN=XTH PE=2 SV=1 Back     alignment and function description
>sp|Q40144|XTH1_SOLLC Probable xyloglucan endotransglucosylase/hydrolase 1 OS=Solanum lycopersicum GN=XTH1 PE=2 SV=1 Back     alignment and function description
>sp|Q8LF99|XTH6_ARATH Probable xyloglucan endotransglucosylase/hydrolase protein 6 OS=Arabidopsis thaliana GN=XTH6 PE=2 SV=2 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query293
124109175293 xyloglucan endotransglycosylase/hydrolas 1.0 1.0 0.866 1e-152
224128708293 predicted protein [Populus trichocarpa] 1.0 1.0 0.863 1e-151
254554080293 xyloglucan endotransglycosylase [Shorea 1.0 1.0 0.860 1e-151
224053607293 predicted protein [Populus trichocarpa] 1.0 1.0 0.849 1e-150
224075417294 predicted protein [Populus trichocarpa] 0.996 0.993 0.856 1e-150
124109187293 xyloglucan endotransglycosylase/hydrolas 1.0 1.0 0.846 1e-150
255543459274 Xyloglucan endotransglucosylase/hydrolas 0.935 1.0 0.901 1e-150
1008904293 xyloglucan endotransglycosylase [Tropaeo 1.0 1.0 0.856 1e-150
187372962293 xyloglucan endotransglucosylase/hydrolas 1.0 1.0 0.832 1e-149
82394881294 xyloglucan endotransglucosylase [Betula 1.0 0.996 0.840 1e-149
>gi|124109175|gb|ABM91063.1| xyloglucan endotransglycosylase/hydrolase precursor XTH-26 [Populus tremula x Populus tremuloides] Back     alignment and taxonomy information
 Score =  542 bits (1397), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 254/293 (86%), Positives = 267/293 (91%)

Query: 1   MASFLWTLCLSALFLASGVISAPPKRPIDVPFGRNYVPTWAFDHIKYFNGGSEIQLVLDK 60
           MASFLWT+CL  L LA+    A PK+ +DVPFGRNY PTWAFDHIKY NGGSEIQL LD 
Sbjct: 1   MASFLWTVCLGFLLLATVTKGASPKQVVDVPFGRNYAPTWAFDHIKYINGGSEIQLKLDN 60

Query: 61  YTGTGFQSKGSYLFGHFSMHIKMVPGDSAGTVTAFYLSSQNSEHDEIDFEFLGNRTGQPY 120
           +TGTGFQSKGSYLFGHFSMHIKMVPGDSAGTVTAFYLSSQ +EHDEIDFEFLGNRTGQPY
Sbjct: 61  FTGTGFQSKGSYLFGHFSMHIKMVPGDSAGTVTAFYLSSQTNEHDEIDFEFLGNRTGQPY 120

Query: 121 ILQTNVYTGGKGDKEQRIYLWFDPTKEFHTYSVLWNMYQIVFLVDDVPIRVFKNSKDLGV 180
           ILQTNVYTGGKGDKEQRIYLWFDPTKE+H YSVLWNMYQIVF VDDVPIRVFKNSKDLG+
Sbjct: 121 ILQTNVYTGGKGDKEQRIYLWFDPTKEYHAYSVLWNMYQIVFFVDDVPIRVFKNSKDLGL 180

Query: 181 RFPFNQPMKIYSSLWNADDWATRGGLEKTDWSKAPFIASYKGFHVDGCEVSVNAKFCETQ 240
           +FPFNQPMKIYSSLWNADDWATRGGLEKTDW+KAPFIASYK FHVDGCE SVNAKFC+TQ
Sbjct: 181 KFPFNQPMKIYSSLWNADDWATRGGLEKTDWAKAPFIASYKSFHVDGCEASVNAKFCDTQ 240

Query: 241 GKRWWDQKAFQDLDAYQYRRLRWVRQKYTIYNYCNDRARFPTPSPECKRDRDI 293
           GKRWWDQK FQDLDA QYR+L WVRQKYTIYNYC DR RFP+  PECKRD DI
Sbjct: 241 GKRWWDQKEFQDLDAAQYRKLGWVRQKYTIYNYCTDRVRFPSLPPECKRDHDI 293

Source: Populus tremula x Populus tremuloides

Species: Populus tremula x Populus tremuloides

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|224128708|ref|XP_002320401.1| predicted protein [Populus trichocarpa] gi|222861174|gb|EEE98716.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|254554080|gb|ACT67416.1| xyloglucan endotransglycosylase [Shorea parvifolia subsp. parvifolia] Back     alignment and taxonomy information
>gi|224053607|ref|XP_002297895.1| predicted protein [Populus trichocarpa] gi|222845153|gb|EEE82700.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|224075417|ref|XP_002304625.1| predicted protein [Populus trichocarpa] gi|222842057|gb|EEE79604.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|124109187|gb|ABM91069.1| xyloglucan endotransglycosylase/hydrolase precursor XTH-27 [Populus trichocarpa] Back     alignment and taxonomy information
>gi|255543459|ref|XP_002512792.1| Xyloglucan endotransglucosylase/hydrolase protein A precursor, putative [Ricinus communis] gi|223547803|gb|EEF49295.1| Xyloglucan endotransglucosylase/hydrolase protein A precursor, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|1008904|gb|AAB39950.1| xyloglucan endotransglycosylase [Tropaeolum majus] Back     alignment and taxonomy information
>gi|187372962|gb|ACD03215.1| xyloglucan endotransglucosylase/hydrolase 5 [Actinidia deliciosa] Back     alignment and taxonomy information
>gi|82394881|gb|ABB72441.1| xyloglucan endotransglucosylase [Betula pendula] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query293
TAIR|locus:2159118293 XTH5 "xyloglucan endotransgluc 0.979 0.979 0.843 2.6e-141
TAIR|locus:2065821296 XTH4 "xyloglucan endotransgluc 0.996 0.986 0.761 8.1e-131
TAIR|locus:2169990292 XTH6 "xyloglucan endotransgluc 0.965 0.969 0.533 1e-84
TAIR|locus:2095168291 XTH16 "xyloglucan endotransglu 0.887 0.893 0.568 1.3e-82
TAIR|locus:2129445289 XTH15 "xyloglucan endotransglu 0.849 0.861 0.593 2e-81
TAIR|locus:2137609293 XTH7 "xyloglucan endotransgluc 0.931 0.931 0.528 1.6e-79
TAIR|locus:2125437290 XTH9 "xyloglucan endotransgluc 0.887 0.896 0.530 4.8e-78
TAIR|locus:2174597284 XTH25 "xyloglucan endotransglu 0.935 0.964 0.526 1.6e-77
TAIR|locus:2174497284 TCH4 "Touch 4" [Arabidopsis th 0.887 0.915 0.551 3.9e-76
TAIR|locus:2117567286 XTR6 "xyloglucan endotransglyc 0.959 0.982 0.519 3.1e-74
TAIR|locus:2159118 XTH5 "xyloglucan endotransglucosylase/hydrolase 5" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1382 (491.5 bits), Expect = 2.6e-141, P = 2.6e-141
 Identities = 242/287 (84%), Positives = 264/287 (91%)

Query:     7 TLCLSALFLASGVISAPPKRPIDVPFGRNYVPTWAFDHIKYFNGGSEIQLVLDKYTGTGF 66
             TLCL+ L LA+     PPK+ I+VPFGRNY PTWAFDHIKY NGGSE+ LVLDKYTGTGF
Sbjct:     7 TLCLTFLILATVAFGVPPKKSINVPFGRNYFPTWAFDHIKYLNGGSEVHLVLDKYTGTGF 66

Query:    67 QSKGSYLFGHFSMHIKMVPGDSAGTVTAFYLSSQNSEHDEIDFEFLGNRTGQPYILQTNV 126
             QSKGSYLFGHFSMHIKMV GDSAGTVTAFYLSSQNSEHDEIDFEFLGNRTGQPYILQTNV
Sbjct:    67 QSKGSYLFGHFSMHIKMVAGDSAGTVTAFYLSSQNSEHDEIDFEFLGNRTGQPYILQTNV 126

Query:   127 YTGGKGDKEQRIYLWFDPTKEFHTYSVLWNMYQIVFLVDDVPIRVFKNSKDLGVRFPFNQ 186
             +TGG G++EQRI LWFDP+K++H+YSVLWNMYQIVF VDDVPIRVFKNSKD+GV+FPFNQ
Sbjct:   127 FTGGAGNREQRINLWFDPSKDYHSYSVLWNMYQIVFFVDDVPIRVFKNSKDVGVKFPFNQ 186

Query:   187 PMKIYSSLWNADDWATRGGLEKTDWSKAPFIASYKGFHVDGCEVSVNAKFCETQGKRWWD 246
             PMKIYSSLWNADDWATRGGLEKT+W KAPF+ASY+GFHVDGCE SVNAKFCETQGKRWWD
Sbjct:   187 PMKIYSSLWNADDWATRGGLEKTNWEKAPFVASYRGFHVDGCEASVNAKFCETQGKRWWD 246

Query:   247 QKAFQDLDAYQYRRLRWVRQKYTIYNYCNDRARFPTPSPECKRDRDI 293
             QK FQDLDA QY+RL+WVR++YTIYNYC DR RFP P PEC+RDRDI
Sbjct:   247 QKEFQDLDANQYKRLKWVRKRYTIYNYCTDRVRFPVPPPECRRDRDI 293
GO:0004553 "hydrolase activity, hydrolyzing O-glycosyl compounds" evidence=IEA
GO:0005576 "extracellular region" evidence=ISM
GO:0005618 "cell wall" evidence=IEA
GO:0005975 "carbohydrate metabolic process" evidence=IEA
GO:0006073 "cellular glucan metabolic process" evidence=IEA
GO:0016762 "xyloglucan:xyloglucosyl transferase activity" evidence=IEA
GO:0016798 "hydrolase activity, acting on glycosyl bonds" evidence=ISS
GO:0048046 "apoplast" evidence=IEA
TAIR|locus:2065821 XTH4 "xyloglucan endotransglucosylase/hydrolase 4" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2169990 XTH6 "xyloglucan endotransglucosylase/hydrolase 6" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2095168 XTH16 "xyloglucan endotransglucosylase/hydrolase 16" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2129445 XTH15 "xyloglucan endotransglucosylase/hydrolase 15" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2137609 XTH7 "xyloglucan endotransglucosylase/hydrolase 7" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2125437 XTH9 "xyloglucan endotransglucosylase/hydrolase 9" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2174597 XTH25 "xyloglucan endotransglucosylase/hydrolase 25" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2174497 TCH4 "Touch 4" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2117567 XTR6 "xyloglucan endotransglycosylase 6" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q39099XTH4_ARATH2, ., 4, ., 1, ., 2, 0, 70.77700.96920.9594nono
Q41638XTHA_PHAAN2, ., 4, ., 1, ., 2, 0, 70.82930.99651.0N/Ano
Q39857XTH_SOYBN2, ., 4, ., 1, ., 2, 0, 70.84130.98630.9796nono
Q8LNZ5XTHB_PHAAN2, ., 4, ., 1, ., 2, 0, 70.81561.01.0N/Ano
Q6YDN9XTH_BRAOB2, ., 4, ., 1, ., 2, 0, 70.75761.00.9932N/Ano
Q41542XTH_WHEAT2, ., 4, ., 1, ., 2, 0, 70.79190.93510.9351N/Ano
P93349XTH_TOBAC2, ., 4, ., 1, ., 2, 0, 70.72540.99310.9864N/Ano
Q40144XTH1_SOLLC2, ., 4, ., 1, ., 2, 0, 70.70500.99310.9831N/Ano
Q9XIW1XTH5_ARATH2, ., 4, ., 1, ., 2, 0, 70.82931.01.0yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer2.4.10.998
4th Layer2.4.1.2070.994

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query293
cd02176263 cd02176, GH16_XET, Xyloglucan endotransglycosylase 1e-167
PLN03161291 PLN03161, PLN03161, Probable xyloglucan endotransg 1e-101
pfam00722174 pfam00722, Glyco_hydro_16, Glycosyl hydrolases fam 3e-79
cd02183203 cd02183, GH16_fungal_CRH1_transglycosylase, glycos 3e-29
cd02175212 cd02175, GH16_lichenase, lichenase, member of glyc 6e-26
cd00413210 cd00413, Glyco_hydrolase_16, glycosyl hydrolase fa 2e-25
pfam0695551 pfam06955, XET_C, Xyloglucan endo-transglycosylase 3e-20
COG2273355 COG2273, SKN1, Beta-glucanase/Beta-glucan syntheta 2e-13
cd08023235 cd08023, GH16_laminarinase_like, Laminarinase, mem 1e-08
cd02178258 cd02178, GH16_beta_agarase, Beta-agarase, member o 0.001
>gnl|CDD|185685 cd02176, GH16_XET, Xyloglucan endotransglycosylase, member of glycosyl hydrolase family 16 Back     alignment and domain information 
 Score =  464 bits (1197), Expect = e-167
 Identities = 154/261 (59%), Positives = 190/261 (72%), Gaps = 2/261 (0%)

Query: 29  DVPFGRNYVPTWAFDHIKYFNGGSEIQLVLDKYTGTGFQSKGSYLFGHFSMHIKMVPGDS 88
              F  N+  TW  DHI+  N G+ +QL LD+ +G+GF+SK  YLFG FSM IK+ PGDS
Sbjct: 3   AASFDENFFVTWGPDHIRVSNDGTSVQLTLDQSSGSGFKSKNKYLFGFFSMRIKLPPGDS 62

Query: 89  AGTVTAFYLSSQN-SEHDEIDFEFLGNRTGQPYILQTNVYTGGKGDKEQRIYLWFDPTKE 147
           AGTVTAFYLSSQ    HDEIDFEFLGN TGQPY LQTNV+  G G +EQRIYLWFDPT +
Sbjct: 63  AGTVTAFYLSSQGPDNHDEIDFEFLGNVTGQPYTLQTNVFANGVGGREQRIYLWFDPTAD 122

Query: 148 FHTYSVLWNMYQIVFLVDDVPIRVFKNSKDLGVRFPFNQPMKIYSSLWNADDWATRGGLE 207
           FHTYS+LWN +QIVF VDDVPIRVFKN++ LGV +P +QPM +Y+S+W+  DWAT+GG  
Sbjct: 123 FHTYSILWNPHQIVFYVDDVPIRVFKNNEALGVPYPSSQPMGVYASIWDGSDWATQGGRV 182

Query: 208 KTDWSKAPFIASYKGFHVDGCEVSVNAKFC-ETQGKRWWDQKAFQDLDAYQYRRLRWVRQ 266
           K DWS APF+ASY+ F +DGC V     F   +  + WW+   +Q L A Q R + WVR+
Sbjct: 183 KIDWSYAPFVASYRDFKLDGCVVDPGDSFSSCSCTEDWWNGSTYQQLSANQQRAMEWVRR 242

Query: 267 KYTIYNYCNDRARFPTPSPEC 287
            Y +Y+YC+DR R+P P PEC
Sbjct: 243 NYMVYDYCDDRKRYPVPPPEC 263

Xyloglucan endotransglycosylases (XETs) cleave and religate xyloglucan polymers in plant cell walls via a transglycosylation mechanism. Xyloglucan is a soluble hemicellulose with a backbone of beta-1,4-linked glucose units, partially substituted with alpha-1,6-linked xylopyranose branches. It binds noncovalently to cellulose, cross-linking the adjacent cellulose microfibrils, giving it a key structural role as a matrix polymer. Therefore, XET plays an important role in all plant processes that require cell wall remodeling. Length = 263
>gnl|CDD|178706 PLN03161, PLN03161, Probable xyloglucan endotransglucosylase/hydrolase protein; Provisional Back     alignment and domain information
>gnl|CDD|216081 pfam00722, Glyco_hydro_16, Glycosyl hydrolases family 16 Back     alignment and domain information
>gnl|CDD|185692 cd02183, GH16_fungal_CRH1_transglycosylase, glycosylphosphatidylinositol-glucanosyltransferase Back     alignment and domain information
>gnl|CDD|185684 cd02175, GH16_lichenase, lichenase, member of glycosyl hydrolase family 16 Back     alignment and domain information
>gnl|CDD|185683 cd00413, Glyco_hydrolase_16, glycosyl hydrolase family 16 Back     alignment and domain information
>gnl|CDD|219239 pfam06955, XET_C, Xyloglucan endo-transglycosylase (XET) C-terminus Back     alignment and domain information
>gnl|CDD|225182 COG2273, SKN1, Beta-glucanase/Beta-glucan synthetase [Carbohydrate transport and metabolism] Back     alignment and domain information
>gnl|CDD|185693 cd08023, GH16_laminarinase_like, Laminarinase, member of the glycosyl hydrolase family 16 Back     alignment and domain information
>gnl|CDD|185687 cd02178, GH16_beta_agarase, Beta-agarase, member of glycosyl hydrolase family 16 Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 293
PLN03161291 Probable xyloglucan endotransglucosylase/hydrolase 100.0
cd02176263 GH16_XET Xyloglucan endotransglycosylase, member o 100.0
cd02183203 GH16_fungal_CRH1_transglycosylase glycosylphosphat 100.0
cd02175212 GH16_lichenase lichenase, member of glycosyl hydro 100.0
PF00722185 Glyco_hydro_16: Glycosyl hydrolases family 16; Int 100.0
cd00413210 Glyco_hydrolase_16 glycosyl hydrolase family 16. T 100.0
cd02178258 GH16_beta_agarase Beta-agarase, member of glycosyl 100.0
cd08023235 GH16_laminarinase_like Laminarinase, member of the 100.0
cd02177269 GH16_kappa_carrageenase Kappa-carrageenase, member 99.97
cd02182259 GH16_Strep_laminarinase_like Streptomyces laminari 99.97
cd02180295 GH16_fungal_KRE6_glucanase Saccharomyces cerevisia 99.97
cd08024330 GH16_CCF Coelomic cytolytic factor, member of glyc 99.96
cd02179321 GH16_beta_GRP beta-1,3-glucan recognition protein, 99.96
COG2273355 SKN1 Beta-glucanase/Beta-glucan synthetase [Carboh 99.93
PF0695551 XET_C: Xyloglucan endo-transglycosylase (XET) C-te 99.83
PF03935504 SKN1: Beta-glucan synthesis-associated protein (SK 99.65
cd02181293 GH16_fungal_Lam16A_glucanase fungal 1,3(4)-beta-D- 99.6
PF09264198 Sial-lect-inser: Vibrio cholerae sialidase, lectin 94.45
PF13385157 Laminin_G_3: Concanavalin A-like lectin/glucanases 93.1
smart00560133 LamGL LamG-like jellyroll fold domain. 90.89
PF06439185 DUF1080: Domain of Unknown Function (DUF1080); Int 90.08
smart00210184 TSPN Thrombospondin N-terminal -like domains. Hepa 85.12
smart00159206 PTX Pentraxin / C-reactive protein / pentaxin fami 82.5
PF10287235 DUF2401: Putative TOS1-like glycosyl hydrolase (DU 80.34
>PLN03161 Probable xyloglucan endotransglucosylase/hydrolase protein; Provisional Back     alignment and domain information 
Probab=100.00  E-value=1.1e-85  Score=608.83  Aligned_cols=280  Identities=45%  Similarity=0.894  Sum_probs=255.8

Q ss_pred             HHHHHHHHhhhhccCCCCCCcCCCcccCCcccccCCCeEEecCCcEEEEEEeCCCccEEEEccceEEEEEEEEEEecCCC
Q 022696            8 LCLSALFLASGVISAPPKRPIDVPFGRNYVPTWAFDHIKYFNGGSEIQLVLDKYTGTGFQSKGSYLFGHFSMHIKMVPGD   87 (293)
Q Consensus         8 ~~~~~~~~~~~~~~~~~~~~~~~~f~~~f~~~w~~~nv~~~~~G~~l~L~ld~~tga~i~Sk~~~~yG~~eariKlp~g~   87 (293)
                      .||+|++++++++-   ..++..+|.++|..+|+.+|+.+.++|..|+|+||+.+|++|+||+.|+||+||+|||||+|+
T Consensus         6 ~~~~~~~~~~~~~~---~~~~~~~f~~~~~~~w~~~~~~~~~~g~~l~L~ld~~sgs~~~Sk~~f~yGr~E~riKLp~G~   82 (291)
T PLN03161          6 TLLVALFAALAAFD---RSFVEADFSKSMYFTWGADHSSMLGNGDNLQLVLDQSSGSGIKSKRAFLFGSIEMLIKLVPGN   82 (291)
T ss_pred             HHHHHHHHHHHhcC---CCcccccccccceeeEcCCcEEEeCCCCEEEEEEeCCccCcEEecceEEEEEEEEEEEeCCCC
Confidence            34555666666543   223367899999999999999998888889999999999999999999999999999999988


Q ss_pred             CCceEEEEEEeecCCCCCeEEEEEcCCCCCCceEEEcccccCCCCCcceeEeccCCCCCCcEEEEEEEcCCeEEEEECCe
Q 022696           88 SAGTVTAFYLSSQNSEHDEIDFEFLGNRTGQPYILQTNVYTGGKGDKEQRIYLWFDPTKEFHTYSVLWNMYQIVFLVDDV  167 (293)
Q Consensus        88 s~G~v~AFwl~~~~~~~~EIDiE~lG~~~g~p~~vqtN~~~~g~g~re~~~~l~fdp~~dfHtY~i~Wtp~~I~fyVDg~  167 (293)
                      ++|+||||||++.++.+|||||||||+++++++++|||+|.+|.+++++++.++|||+++||+|+|+|+|++|+|||||+
T Consensus        83 saG~v~AFwl~s~~~~~dEIDiEfLG~~~g~~~~vqtN~y~~g~g~re~~~~l~fDpt~dFHtYsI~Wtp~~I~wyVDG~  162 (291)
T PLN03161         83 SAGTVTAYYLSSTGSRHDEIDFEFLGNVSGQPYTIHTNIYTQGNGSREQQFRPWFDPTADFHNYTIHWNPSEVVWYVDGT  162 (291)
T ss_pred             CCCeEEEEEecCCCCCCCeEEEEecCCCCCCceEEEeceEeCCcCCcceeccccCCCccCcEEEEEEEchhhEEEEECCE
Confidence            89999999999977789999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EEEEEEeccCCCCCCCCCCCcEEEEEeecCCCccCCCCCcccCCCCCCEEEEEeEEEEeeeeeCCC--CCccccC-Cccc
Q 022696          168 PIRVFKNSKDLGVRFPFNQPMKIYSSLWNADDWATRGGLEKTDWSKAPFIASYKGFHVDGCEVSVN--AKFCETQ-GKRW  244 (293)
Q Consensus       168 ~vr~~~~~~~~g~~~P~~~Pm~l~lnlw~gg~Wat~GG~~~~d~~~~Pf~a~~~~~~v~~c~~~~~--~~~c~~~-~~~~  244 (293)
                      +||++++.+..|.+||+++||+|++|||+|++|||+||++||||+++||+|.|++|+++||.++++  ...|... +..|
T Consensus       163 ~iRt~~~~~~~g~~yP~~~pM~i~~siW~g~~wAt~gG~~kidw~~aPf~a~~~~f~~~~C~~~~~~~~~~c~~~~~~~~  242 (291)
T PLN03161        163 PIRVFRNYENEGIAYPNKQGMRVYSSLWNADNWATQGGRVKIDWTLAPFVARGRRFRARACKWNGPVSIKQCADPTPSNW  242 (291)
T ss_pred             EEEEEEcccccCCcCCCccceEEEEeeecCCCcccCCCceeccCCcCCeeEEeeeEEEEeeccCCCCCccccCCCCcccc
Confidence            999999877778899988899999999999999999999999999999999999999999997643  3479754 4679


Q ss_pred             ccccccCCCCHHHHHHHHHHhhcCeeeecccCCCCCCC-CCCCCcCC
Q 022696          245 WDQKAFQDLDAYQYRRLRWVRQKYTIYNYCNDRARFPT-PSPECKRD  290 (293)
Q Consensus       245 ~~~~~~~~l~~~~~~~~~~~~~~~~~y~yc~d~~r~~~-~~~ec~~~  290 (293)
                      |+++.|++|+.+|+++|+|||+||||||||+|++|||+ +||||.++
T Consensus       243 ~~~~~~~~l~~~~~~~~~~v~~~~m~Y~YC~D~~R~~~~~p~EC~~~  289 (291)
T PLN03161        243 WTSPSYSQLTNAQLTQMKKVRDNFMIYDYCKDTKRFNGVMPPECFKP  289 (291)
T ss_pred             ccCccccCCCHHHHHHHHHHHhCcEEEeccCCCCcCCCCcCcccCCC
Confidence            99999999999999999999999999999999999999 89999875

>cd02176 GH16_XET Xyloglucan endotransglycosylase, member of glycosyl hydrolase family 16 Back     alignment and domain information
>cd02183 GH16_fungal_CRH1_transglycosylase glycosylphosphatidylinositol-glucanosyltransferase Back     alignment and domain information
>cd02175 GH16_lichenase lichenase, member of glycosyl hydrolase family 16 Back     alignment and domain information
>PF00722 Glyco_hydro_16: Glycosyl hydrolases family 16; InterPro: IPR000757 O-Glycosyl hydrolases 3 Back     alignment and domain information
>cd00413 Glyco_hydrolase_16 glycosyl hydrolase family 16 Back     alignment and domain information
>cd02178 GH16_beta_agarase Beta-agarase, member of glycosyl hydrolase family 16 Back     alignment and domain information
>cd08023 GH16_laminarinase_like Laminarinase, member of the glycosyl hydrolase family 16 Back     alignment and domain information
>cd02177 GH16_kappa_carrageenase Kappa-carrageenase, member of glycosyl hydrolase family 16 Back     alignment and domain information
>cd02182 GH16_Strep_laminarinase_like Streptomyces laminarinase-like, member of glycosyl hydrolase family 16 Back     alignment and domain information
>cd02180 GH16_fungal_KRE6_glucanase Saccharomyces cerevisiae KRE6 and related glucanses, member of glycosyl hydrolase family 16 Back     alignment and domain information
>cd08024 GH16_CCF Coelomic cytolytic factor, member of glycosyl hydrolase family 16 Back     alignment and domain information
>cd02179 GH16_beta_GRP beta-1,3-glucan recognition protein, member of glycosyl hydrolase family 16 Back     alignment and domain information
>COG2273 SKN1 Beta-glucanase/Beta-glucan synthetase [Carbohydrate transport and metabolism] Back     alignment and domain information
>PF06955 XET_C: Xyloglucan endo-transglycosylase (XET) C-terminus; InterPro: IPR010713 This entry represents the C terminus (approximately 60 residues) of plant xyloglucan endo-transglycosylase (XET) Back     alignment and domain information
>PF03935 SKN1: Beta-glucan synthesis-associated protein (SKN1); InterPro: IPR005629 This family consists of the beta-glucan synthesis-associated proteins KRE6 and SKN1 Back     alignment and domain information
>cd02181 GH16_fungal_Lam16A_glucanase fungal 1,3(4)-beta-D-glucanases, similar to Phanerochaete chrysosporium laminarinase 16A Back     alignment and domain information
>PF09264 Sial-lect-inser: Vibrio cholerae sialidase, lectin insertion; InterPro: IPR015344 This domain is predominantly found in Vibrio cholerae sialidase, and adopt a beta sandwich structure consisting of 12-14 strands arranged in two beta-sheets Back     alignment and domain information
>PF13385 Laminin_G_3: Concanavalin A-like lectin/glucanases superfamily; PDB: 4DQA_A 1N1Y_A 1MZ6_A 1MZ5_A 1N1S_A 2A75_A 1WCS_A 1N1T_A 1N1V_A 2FHR_A Back     alignment and domain information
>smart00560 LamGL LamG-like jellyroll fold domain Back     alignment and domain information
>PF06439 DUF1080: Domain of Unknown Function (DUF1080); InterPro: IPR010496 This is a family of proteins of unknown function Back     alignment and domain information
>smart00210 TSPN Thrombospondin N-terminal -like domains Back     alignment and domain information
>smart00159 PTX Pentraxin / C-reactive protein / pentaxin family Back     alignment and domain information
>PF10287 DUF2401: Putative TOS1-like glycosyl hydrolase (DUF2401); InterPro: IPR018805 This entry represents a family of proteins conserved primarily in fungi Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query293
1umz_A278 Xyloglucan Endotransglycosylase In Complex With The 1e-146
2vh9_A290 Crystal Structure Of Nxg1-Deltayniig In Complex Wit 5e-51
2uwb_A267 Crystal Structure Of The Nasturtium Seedling Mutant 1e-50
2uwc_A271 Crystal Structure Of Nasturtium Xyloglucan Hydrolas 5e-49
2uwa_A274 Crystal Structure Of The Nasturtium Seedling Xylogl 8e-49
3d6e_A201 Crystal Structure Of The Engineered 1,3-1,4-Beta-Gl 2e-14
1mac_A212 Crystal Structure And Site-Directed Mutagenesis Of 2e-11
1byh_A214 Molecular And Active-Site Structure Of A Bacillus ( 2e-11
1axk_A 394 Engineered Bacillus Bifunctional Enzyme Gluxyn-1 Le 5e-11
1cpn_A208 Native-Like In Vivo Folding Of A Circularly Permute 5e-11
1cpm_A214 Native-Like In Vivo Folding Of A Circularly Permute 6e-11
1u0a_A214 Crystal Structure Of The Engineered Beta-1,3-1,4-En 1e-10
3o5s_A238 Crystal Structure Of The Endo-Beta-1,3-1,4 Glucanas 5e-09
3i4i_A234 Crystal Structure Of A Prokaryotic Beta-1,3-1,4-Glu 7e-09
1ajk_A214 Circularly Permuted (1-3,1-4)-Beta-D-Glucan 4- Gluc 1e-08
1gbg_A214 Bacillus Licheniformis Beta-Glucanase Length = 214 3e-08
3axd_A249 The Truncated Fibrobacter Succinogenes 1,3-1,4-Beta 3e-04
2r49_A241 Mutational And Structural Studies Of E85i Reveal Th 8e-04
>pdb|1UMZ|A Chain A, Xyloglucan Endotransglycosylase In Complex With The Xyloglucan Nonasaccharide Xllg. Length = 278 Back     alignment and structure 
Iteration: 1

 Score =  515 bits (1326), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 239/272 (87%), Positives = 254/272 (93%)
Query: 22  APPKRPIDVPFGRNYVPTWAFDHIKYFNGGSEIQLVLDKYTGTGFQSKGSYLFGHFSMHI 81
           A  ++P+DV FGRNYVPTWAFDHIKYFNGG+EIQL LDKYTGTGFQSKGSYLFGHFSM +
Sbjct: 7   AALRKPVDVAFGRNYVPTWAFDHIKYFNGGNEIQLHLDKYTGTGFQSKGSYLFGHFSMQM 66
Query: 82  KMVPGDSAGTVTAFYLSSQNSEHDEIDFEFLGNRTGQPYILQTNVYTGGKGDKEQRIYLW 141
           K+VPGDSAGTVTAFYLSSQNSEHDEIDFEFLGNRTGQPYILQTNV+TGGKGD+EQRIYLW
Sbjct: 67  KLVPGDSAGTVTAFYLSSQNSEHDEIDFEFLGNRTGQPYILQTNVFTGGKGDREQRIYLW 126
Query: 142 FDPTKEFHTYSVLWNMYQIVFLVDDVPIRVFKNSKDLGVRFPFNQPMKIYSSLWNADDWA 201
           FDPTKEFH YSVLWNMY IVFLVDDVPIRVFKN KDLGV+FPFNQPMKIYSSLWNADDWA
Sbjct: 127 FDPTKEFHYYSVLWNMYMIVFLVDDVPIRVFKNCKDLGVKFPFNQPMKIYSSLWNADDWA 186
Query: 202 TRGGLEKTDWSKAPFIASYKGFHVDGCEVSVNAKFCETQGKRWWDQKAFQDLDAYQYRRL 261
           TRGGLEKTDWSKAPFIASY+ FH+DGCE SV AKFC TQG RWWDQK FQDLDA+QYRRL
Sbjct: 187 TRGGLEKTDWSKAPFIASYRSFHIDGCEASVEAKFCATQGARWWDQKEFQDLDAFQYRRL 246
Query: 262 RWVRQKYTIYNYCNDRARFPTPSPECKRDRDI 293
            WVRQKYTIYNYC DR+R+P+  PECKRDRDI
Sbjct: 247 SWVRQKYTIYNYCTDRSRYPSMPPECKRDRDI 278
>pdb|2VH9|A Chain A, Crystal Structure Of Nxg1-Deltayniig In Complex With Xllg, A Xyloglucan Derived Oligosaccharide Length = 290 Back     alignment and structure
>pdb|2UWB|A Chain A, Crystal Structure Of The Nasturtium Seedling Mutant Xyloglucanase Isoform Nxg1-Delta-Yniig Length = 267 Back     alignment and structure
>pdb|2UWC|A Chain A, Crystal Structure Of Nasturtium Xyloglucan Hydrolase Isoform Nxg2 Length = 271 Back     alignment and structure
>pdb|2UWA|A Chain A, Crystal Structure Of The Nasturtium Seedling Xyloglucanase Isoform Nxg1 Length = 274 Back     alignment and structure
>pdb|3D6E|A Chain A, Crystal Structure Of The Engineered 1,3-1,4-Beta-Glucanase Protein From Bacillus Licheniformis Length = 201 Back     alignment and structure
>pdb|1MAC|A Chain A, Crystal Structure And Site-Directed Mutagenesis Of Bacillus Macerans Endo-1,3-1,4-Beta-Glucanase Length = 212 Back     alignment and structure
>pdb|1BYH|A Chain A, Molecular And Active-Site Structure Of A Bacillus (1-3,1-4)- Beta-Glucanase Length = 214 Back     alignment and structure
>pdb|1AXK|A Chain A, Engineered Bacillus Bifunctional Enzyme Gluxyn-1 Length = 394 Back     alignment and structure
>pdb|1CPN|A Chain A, Native-Like In Vivo Folding Of A Circularly Permuted Jellyroll Protein Shown By Crystal Structure Analysis Length = 208 Back     alignment and structure
>pdb|1CPM|A Chain A, Native-Like In Vivo Folding Of A Circularly Permuted Jellyroll Protein Shown By Crystal Structure Analysis Length = 214 Back     alignment and structure
>pdb|1U0A|A Chain A, Crystal Structure Of The Engineered Beta-1,3-1,4-Endoglucanase H(A16- M) In Complex With Beta-Glucan Tetrasaccharide Length = 214 Back     alignment and structure
>pdb|3O5S|A Chain A, Crystal Structure Of The Endo-Beta-1,3-1,4 Glucanase From Bacillus Subtilis (Strain 168) Length = 238 Back     alignment and structure
>pdb|3I4I|A Chain A, Crystal Structure Of A Prokaryotic Beta-1,3-1,4-Glucanase (Lichenase) Derived From A Mouse Hindgut Metagenome Length = 234 Back     alignment and structure
>pdb|1AJK|A Chain A, Circularly Permuted (1-3,1-4)-Beta-D-Glucan 4- Glucanohydrolase Cpa16m-84 Length = 214 Back     alignment and structure
>pdb|1GBG|A Chain A, Bacillus Licheniformis Beta-Glucanase Length = 214 Back     alignment and structure
>pdb|3AXD|A Chain A, The Truncated Fibrobacter Succinogenes 1,3-1,4-Beta-D-Glucanase V18yW203Y IN APO-Form Length = 249 Back     alignment and structure
>pdb|2R49|A Chain A, Mutational And Structural Studies Of E85i Reveal The Flexible Loops Of Fibrobacter Succinogenes 1,3-1,4-beta-d- Glucanaseglucanase Length = 241 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query293
1umz_A278 Xyloglucan endotransglycosylase; glycoside hydrola 1e-128
2uwa_A274 Cellulase; glycoside hydrolase, xyloglucan-endo-tr 1e-101
3o5s_A238 Beta-glucanase; glycosyl hydrolase, beta-jelly rol 2e-67
2ayh_A214 1,3-1,4-beta-D-glucan 4-glucanohydrolase; hydrolas 9e-66
1cpn_A208 Circularly permuted; hydrolase(glucanase); 1.80A { 2e-65
3i4i_A234 1,3-1,4-beta-glucanase; beta-sandwich, hydrolase; 1e-61
1axk_A 394 Gluxyn-1; bifunctional, fusion protein, 1,4-beta-x 6e-59
3h0o_A240 Beta-glucanase; 1,3-1,4-beta-D-glucanase, CH-PI st 3e-52
1ajk_A214 CPA16M-84, circularly permuted (1-3,1-4)-beta-D-gl 6e-50
1ajo_A214 CPA16M-127, circularly permuted (1-3,1-4)-beta-D-g 4e-18
1ajo_A214 CPA16M-127, circularly permuted (1-3,1-4)-beta-D-g 2e-16
2hyk_A245 Beta-1,3-glucanase; family 16, beta-jelly roll, ba 4e-10
3juu_A280 Porphyranase B; glycoside hydrolase family GH16, b 5e-10
1dyp_A271 Kappa-carrageenase; hydrolase, kappa-carrageenan d 8e-10
3azy_A272 Laminarinase; beta-jelly roll fold, glycosyl hydro 4e-09
3rq0_A269 Glycosyl hydrolases family protein 16; structural 5e-09
1ups_A420 Glcnac-alpha-1,4-GAL-releasing endo-beta- galactos 2e-08
1o4y_A288 Beta-agarase A; glycoside hydrolase family 16, aga 4e-08
2vy0_A264 Endo-beta-1,3-glucanase; hydrolase, laminarin, end 5e-08
4ate_A266 Beta-porphyranase A; hydrolase, AGAR degradation; 5e-08
4awd_A324 Beta-porphyranase; hydrolase; 2.40A {Bacteroides p 7e-08
3iln_A251 Laminarinase; jelly ROW, hydrolase, family 16 glyc 2e-07
4asm_B363 Beta-agarase D; hydrolase, glycoside hydrolase, en 1e-05
4atf_A308 Beta-agarase B; hydrolase, polysaccharidase, agaro 4e-05
3dgt_A280 Endo-1,3-beta-glucanase; GHF16, hydrolase, 1; 1.50 4e-05
1o4z_A346 Beta-agarase B; glycoside hydrolase family 16, aga 2e-04
>1umz_A Xyloglucan endotransglycosylase; glycoside hydrolase, XET, XTH, XEH, transglycosylation, transferase, glycosyltransferase; HET: NAG BMA BGC GAL; 1.8A {Populus tremula} SCOP: b.29.1.2 PDB: 1un1_A* Length = 278 Back     alignment and structure
 Score =  365 bits (939), Expect = e-128
 Identities = 239/273 (87%), Positives = 254/273 (93%)

Query: 21  SAPPKRPIDVPFGRNYVPTWAFDHIKYFNGGSEIQLVLDKYTGTGFQSKGSYLFGHFSMH 80
            A  ++P+DV FGRNYVPTWAFDHIKYFNGG+EIQL LDKYTGTGFQSKGSYLFGHFSM 
Sbjct: 6   FAALRKPVDVAFGRNYVPTWAFDHIKYFNGGNEIQLHLDKYTGTGFQSKGSYLFGHFSMQ 65

Query: 81  IKMVPGDSAGTVTAFYLSSQNSEHDEIDFEFLGNRTGQPYILQTNVYTGGKGDKEQRIYL 140
           +K+VPGDSAGTVTAFYLSSQNSEHDEIDFEFLGNRTGQPYILQTNV+TGGKGD+EQRIYL
Sbjct: 66  MKLVPGDSAGTVTAFYLSSQNSEHDEIDFEFLGNRTGQPYILQTNVFTGGKGDREQRIYL 125

Query: 141 WFDPTKEFHTYSVLWNMYQIVFLVDDVPIRVFKNSKDLGVRFPFNQPMKIYSSLWNADDW 200
           WFDPTKEFH YSVLWNMY IVFLVDDVPIRVFKN KDLGV+FPFNQPMKIYSSLWNADDW
Sbjct: 126 WFDPTKEFHYYSVLWNMYMIVFLVDDVPIRVFKNCKDLGVKFPFNQPMKIYSSLWNADDW 185

Query: 201 ATRGGLEKTDWSKAPFIASYKGFHVDGCEVSVNAKFCETQGKRWWDQKAFQDLDAYQYRR 260
           ATRGGLEKTDWSKAPFIASY+ FH+DGCE SV AKFC TQG RWWDQK FQDLDA+QYRR
Sbjct: 186 ATRGGLEKTDWSKAPFIASYRSFHIDGCEASVEAKFCATQGARWWDQKEFQDLDAFQYRR 245

Query: 261 LRWVRQKYTIYNYCNDRARFPTPSPECKRDRDI 293
           L WVRQKYTIYNYC DR+R+P+  PECKRDRDI
Sbjct: 246 LSWVRQKYTIYNYCTDRSRYPSMPPECKRDRDI 278
>2uwa_A Cellulase; glycoside hydrolase, xyloglucan-endo-transferase, hydrolase, glycosidase, family GH16, tropaeolum majus xyloglucanase; 1.8A {Tropaeolum majus} PDB: 2uwc_A 2uwb_A 2vh9_A* Length = 274 Back     alignment and structure
>3o5s_A Beta-glucanase; glycosyl hydrolase, beta-jelly roll, hydrolase; HET: B3P; 2.20A {Bacillus subtilis} PDB: 3d6e_A Length = 238 Back     alignment and structure
>2ayh_A 1,3-1,4-beta-D-glucan 4-glucanohydrolase; hydrolase (glucanase); 1.60A {Hybrid} SCOP: b.29.1.2 PDB: 1byh_A 1glh_A 1u0a_A* 1mac_A 1gbg_A Length = 214 Back     alignment and structure
>1cpn_A Circularly permuted; hydrolase(glucanase); 1.80A {Paenibacillus macerans} SCOP: b.29.1.2 PDB: 1cpm_A Length = 208 Back     alignment and structure
>3i4i_A 1,3-1,4-beta-glucanase; beta-sandwich, hydrolase; 1.89A {Uncultured murine large bowel bacteriuorganism_taxid} Length = 234 Back     alignment and structure
>1axk_A Gluxyn-1; bifunctional, fusion protein, 1,4-beta-xylanase, 1,3-1,4-beta-glucanase, hybrid enzyme; 2.10A {Bacillus subtilis} SCOP: b.29.1.2 b.29.1.11 Length = 394 Back     alignment and structure
>3h0o_A Beta-glucanase; 1,3-1,4-beta-D-glucanase, CH-PI stacking interactions, TRIS inhibition, hydrolase, glycosidase; 1.40A {Fibrobacter succinogenes} PDB: 1mve_A 1zm1_A* 2r4a_A 3hr9_A 2r49_A 3axd_A 3axe_A* Length = 240 Back     alignment and structure
>1ajk_A CPA16M-84, circularly permuted (1-3,1-4)-beta-D-glucan 4- glucanohydrolase; glucanase, circular permutation; HET: EPE; 1.80A {Paenibacillus macerans} SCOP: b.29.1.2 Length = 214 Back     alignment and structure
>1ajo_A CPA16M-127, circularly permuted (1-3,1-4)-beta-D-glucan 4- glucanohydrolase CPA16M-127; glucanase, circular permutation; 2.07A {Paenibacillus macerans} SCOP: b.29.1.2 Length = 214 Back     alignment and structure
>1ajo_A CPA16M-127, circularly permuted (1-3,1-4)-beta-D-glucan 4- glucanohydrolase CPA16M-127; glucanase, circular permutation; 2.07A {Paenibacillus macerans} SCOP: b.29.1.2 Length = 214 Back     alignment and structure
>2hyk_A Beta-1,3-glucanase; family 16, beta-jelly roll, bacterial endo-beta-1,3-glucanas hydrolase; 1.30A {Nocardiopsis SP} PDB: 3atg_A Length = 245 Back     alignment and structure
>3juu_A Porphyranase B; glycoside hydrolase family GH16, beta-sandwich fold, jelly roll, sugar binding protein, hydrolase-carbohydrate complex; HET: MES GOL; 1.80A {Zobellia galactanivorans} Length = 280 Back     alignment and structure
>1dyp_A Kappa-carrageenase; hydrolase, kappa-carrageenan double helix degradation; HET: MSE; 1.54A {Pseudoalteromonas carrageenovora} SCOP: b.29.1.2 Length = 271 Back     alignment and structure
>3azy_A Laminarinase; beta-jelly roll fold, glycosyl hydrolase family 16, laminari endo-1,3-beta-glucanase, hydrolase; 1.65A {Thermotoga maritima} PDB: 3azx_A 3azz_A* 3b00_A* 3b01_A 4dfs_A Length = 272 Back     alignment and structure
>3rq0_A Glycosyl hydrolases family protein 16; structural genomics, PSI-biology; HET: PG4 211; 2.02A {Mycobacterium smegmatis} Length = 269 Back     alignment and structure
>1ups_A Glcnac-alpha-1,4-GAL-releasing endo-beta- galactosidase; endo-galactosidase, glycosyl hydrolase, PSI, protein structure initiative; 1.82A {Clostridium perfringens} SCOP: b.29.1.2 b.42.2.3 Length = 420 Back     alignment and structure
>1o4y_A Beta-agarase A; glycoside hydrolase family 16, agarose degradation, cleavage of beta-1, 4-D-galactose linkages; HET: SO4; 1.48A {Zobellia galactanivorans} SCOP: b.29.1.2 PDB: 1urx_A* Length = 288 Back     alignment and structure
>2vy0_A Endo-beta-1,3-glucanase; hydrolase, laminarin, endoglucanase, thermostable protein,; 2.16A {Pyrococcus furiosus} Length = 264 Back     alignment and structure
>4ate_A Beta-porphyranase A; hydrolase, AGAR degradation; 1.10A {Zobellia galactanivorans} PDB: 3ilf_A* Length = 266 Back     alignment and structure
>4awd_A Beta-porphyranase; hydrolase; 2.40A {Bacteroides plebeius} Length = 324 Back     alignment and structure
>3iln_A Laminarinase; jelly ROW, hydrolase, family 16 glycosyl hydrolase; 1.95A {Rhodothermus marinus} Length = 251 Back     alignment and structure
>4asm_B Beta-agarase D; hydrolase, glycoside hydrolase, endo-beta-agarase; 1.50A {Zobellia galactanivorans} Length = 363 Back     alignment and structure
>4atf_A Beta-agarase B; hydrolase, polysaccharidase, agarolytic enzyme; HET: AAL GAL; 1.90A {Zobellia galactanivorans} Length = 308 Back     alignment and structure
>3dgt_A Endo-1,3-beta-glucanase; GHF16, hydrolase, 1; 1.50A {Streptomyces sioyaensis} Length = 280 Back     alignment and structure
>1o4z_A Beta-agarase B; glycoside hydrolase family 16, agarose degradation, cleavage of beta-1, 4-D-galactose linkages; HET: EPE; 2.30A {Zobellia galactanivorans} SCOP: b.29.1.2 Length = 346 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query293
1umz_A278 Xyloglucan endotransglycosylase; glycoside hydrola 100.0
2uwa_A274 Cellulase; glycoside hydrolase, xyloglucan-endo-tr 100.0
3o5s_A238 Beta-glucanase; glycosyl hydrolase, beta-jelly rol 100.0
3i4i_A234 1,3-1,4-beta-glucanase; beta-sandwich, hydrolase; 100.0
2ayh_A214 1,3-1,4-beta-D-glucan 4-glucanohydrolase; hydrolas 100.0
3iln_A251 Laminarinase; jelly ROW, hydrolase, family 16 glyc 100.0
1cpn_A208 Circularly permuted; hydrolase(glucanase); 1.80A { 100.0
2hyk_A245 Beta-1,3-glucanase; family 16, beta-jelly roll, ba 100.0
3h0o_A240 Beta-glucanase; 1,3-1,4-beta-D-glucanase, CH-PI st 100.0
3rq0_A269 Glycosyl hydrolases family protein 16; structural 100.0
1axk_A 394 Gluxyn-1; bifunctional, fusion protein, 1,4-beta-x 100.0
4ate_A266 Beta-porphyranase A; hydrolase, AGAR degradation; 100.0
3azy_A272 Laminarinase; beta-jelly roll fold, glycosyl hydro 100.0
2vy0_A264 Endo-beta-1,3-glucanase; hydrolase, laminarin, end 100.0
3juu_A280 Porphyranase B; glycoside hydrolase family GH16, b 100.0
1o4y_A288 Beta-agarase A; glycoside hydrolase family 16, aga 100.0
1dyp_A271 Kappa-carrageenase; hydrolase, kappa-carrageenan d 100.0
3dgt_A280 Endo-1,3-beta-glucanase; GHF16, hydrolase, 1; 1.50 100.0
4awd_A324 Beta-porphyranase; hydrolase; 2.40A {Bacteroides p 100.0
1o4z_A346 Beta-agarase B; glycoside hydrolase family 16, aga 100.0
4atf_A308 Beta-agarase B; hydrolase, polysaccharidase, agaro 100.0
1ups_A420 Glcnac-alpha-1,4-GAL-releasing endo-beta- galactos 100.0
1ajk_A214 CPA16M-84, circularly permuted (1-3,1-4)-beta-D-gl 99.97
4asm_B363 Beta-agarase D; hydrolase, glycoside hydrolase, en 99.95
2w39_A298 Putative laminarinase; hydrolase, white ROT fungus 99.94
1ajo_A214 CPA16M-127, circularly permuted (1-3,1-4)-beta-D-g 99.86
1ajo_A214 CPA16M-127, circularly permuted (1-3,1-4)-beta-D-g 99.79
1ajk_A214 CPA16M-84, circularly permuted (1-3,1-4)-beta-D-gl 97.04
3flp_A217 SAP-like pentraxin; physiological doubly-stacked h 92.57
3pvn_A206 C-reactive protein; pentraxin family, immune syste 80.03
>1umz_A Xyloglucan endotransglycosylase; glycoside hydrolase, XET, XTH, XEH, transglycosylation, transferase, glycosyltransferase; HET: NAG BMA BGC GAL; 1.8A {Populus tremula} SCOP: b.29.1.2 PDB: 1un1_A* Back     alignment and structure
Probab=100.00  E-value=1e-80  Score=575.74  Aligned_cols=264  Identities=89%  Similarity=1.554  Sum_probs=248.6

Q ss_pred             CCCcccCCcccccCCCeEEecCCcEEEEEEeCCCccEEEEccceEEEEEEEEEEecCCCCCceEEEEEEeecCCCCCeEE
Q 022696           29 DVPFGRNYVPTWAFDHIKYFNGGSEIQLVLDKYTGTGFQSKGSYLFGHFSMHIKMVPGDSAGTVTAFYLSSQNSEHDEID  108 (293)
Q Consensus        29 ~~~f~~~f~~~w~~~nv~~~~~G~~l~L~ld~~tga~i~Sk~~~~yG~~eariKlp~g~s~G~v~AFwl~~~~~~~~EID  108 (293)
                      +.+|.++|+++|+++||++.++|+.|+|+|++++||+|.||+.|+||+||||||+|+|+++|+||||||++.+|.++|||
T Consensus        14 ~~~f~~~~~~~w~~~nv~~~~~G~~l~L~l~~~tsa~i~Sk~~f~YGr~Ear~Klp~g~s~G~wpAfwll~~~p~~gEID   93 (278)
T 1umz_A           14 DVAFGRNYVPTWAFDHIKYFNGGNEIQLHLDKYTGTGFQSKGSYLFGHFSMQMKLVPGDSAGTVTAFYLSSQNSEHDEID   93 (278)
T ss_dssp             CCCHHHHEEEEECGGGEEEEGGGTEEEEEECSSCCEEEEESSCEEEEEEEEEEECCCSCCTTEEEEEEEECSSSSCCEEE
T ss_pred             CCcccCCceeeECCCCEEEeCCCCEEEEEECCCccCEEEECcEEECEEEEEEEEeCCCCCCceEEEEEEecCCCCCCeEE
Confidence            67899999999999999998888889999999999999999999999999999999998899999999999888999999


Q ss_pred             EEEcCCCCCCceEEEcccccCCCCCcceeEeccCCCCCCcEEEEEEEcCCeEEEEECCeEEEEEEeccCCCCCCCCCCCc
Q 022696          109 FEFLGNRTGQPYILQTNVYTGGKGDKEQRIYLWFDPTKEFHTYSVLWNMYQIVFLVDDVPIRVFKNSKDLGVRFPFNQPM  188 (293)
Q Consensus       109 iE~lG~~~g~p~~vqtN~~~~g~g~re~~~~l~fdp~~dfHtY~i~Wtp~~I~fyVDg~~vr~~~~~~~~g~~~P~~~Pm  188 (293)
                      ||++|+.+++++++|+|+|.+|.+++++++.+++|++++||+|+|+|+|++|+|||||+++|++++.+..+.+|||++||
T Consensus        94 mE~lG~~~g~~~tvhtn~~~~g~~~~~~~~~l~~d~~~dFHtY~i~Wtp~~I~fyVDG~~v~t~~~~~~~g~~~Pf~~P~  173 (278)
T 1umz_A           94 FEFLGNRTGQPYILQTNVFTGGKGDREQRIYLWFDPTKEFHYYSVLWNMYMIVFLVDDVPIRVFKNCKDLGVKFPFNQPM  173 (278)
T ss_dssp             EEEECCSTTSCCEEEEEEEBTTBCCCCEEECCSSCTTTSCEEEEEEECSSEEEEEETTEEEEEEECCGGGTCCCSCSSCB
T ss_pred             EEEeCCCCCCceEEEEEEecCCCCCCcceEecCCCCccCcEEEEEEEecCeEEEEECCeEEEEEecCcCcCccCcCCCce
Confidence            99999998899999999999999899999999999999999999999999999999999999999877667889999999


Q ss_pred             EEEEEeecCCCccCCCCCcccCCCCCCEEEEEeEEEEeeeeeCCCCCccccCCcccccccccCCCCHHHHHHHHHHhhcC
Q 022696          189 KIYSSLWNADDWATRGGLEKTDWSKAPFIASYKGFHVDGCEVSVNAKFCETQGKRWWDQKAFQDLDAYQYRRLRWVRQKY  268 (293)
Q Consensus       189 ~l~lnlw~gg~Wat~GG~~~~d~~~~Pf~a~~~~~~v~~c~~~~~~~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~  268 (293)
                      +|+||||+||+|+++||++++||+++||+++|+.+++.+|..+.+.+.|.+.+..||+++.+++|+++|+++|+|||+||
T Consensus       174 ~lilnlw~GG~Wa~~gG~~~~d~~~~p~v~~vr~~~~~~c~~~~~~~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~  253 (278)
T 1umz_A          174 KIYSSLWNADDWATRGGLEKTDWSKAPFIASYRSFHIDGCEASVEAKFCATQGARWWDQKEFQDLDAFQYRRLSWVRQKY  253 (278)
T ss_dssp             EEEEEEEECTTTSSGGGTSCCCGGGCCEEEEEEEEEEEEEECCSSSCCCTTTTCSGGGSGGGSSCCHHHHHHHHHHHHHT
T ss_pred             EEEEEEEECCcccCCCCccccCCCCCCEEEEEEEEEEecccCCCCCCccCCCcccccccCccccCCHHHHHHHHHHHHCC
Confidence            99999999999999999889999999999999999999999764445698766779999999999999999999999999


Q ss_pred             eeeecccCCCCCCCCCCCCcCCCC
Q 022696          269 TIYNYCNDRARFPTPSPECKRDRD  292 (293)
Q Consensus       269 ~~y~yc~d~~r~~~~~~ec~~~~~  292 (293)
                      ||||||+|++|||++||||.++..
T Consensus       254 ~~y~yc~d~~r~~~~~~ec~~~~~  277 (278)
T 1umz_A          254 TIYNYCTDRSRYPSMPPECKRDRD  277 (278)
T ss_dssp             EEEEGGGCTTTCSSCCTHHHHHTC
T ss_pred             eEEecCCCCCcCCCCCcccCCCCC
Confidence            999999999999999999976543
>2uwa_A Cellulase; glycoside hydrolase, xyloglucan-endo-transferase, hydrolase, glycosidase, family GH16, tropaeolum majus xyloglucanase; 1.8A {Tropaeolum majus} PDB: 2uwc_A 2uwb_A 2vh9_A* Back     alignment and structure
>3o5s_A Beta-glucanase; glycosyl hydrolase, beta-jelly roll, hydrolase; HET: B3P; 2.20A {Bacillus subtilis} PDB: 3d6e_A Back     alignment and structure
>3i4i_A 1,3-1,4-beta-glucanase; beta-sandwich, hydrolase; 1.89A {Uncultured murine large bowel bacteriuorganism_taxid} Back     alignment and structure
>2ayh_A 1,3-1,4-beta-D-glucan 4-glucanohydrolase; hydrolase (glucanase); 1.60A {Hybrid} SCOP: b.29.1.2 PDB: 1byh_A 1glh_A 1u0a_A* 1mac_A 1gbg_A Back     alignment and structure
>3iln_A Laminarinase; jelly ROW, hydrolase, family 16 glycosyl hydrolase; 1.95A {Rhodothermus marinus} Back     alignment and structure
>1cpn_A Circularly permuted; hydrolase(glucanase); 1.80A {Paenibacillus macerans} SCOP: b.29.1.2 PDB: 1cpm_A Back     alignment and structure
>2hyk_A Beta-1,3-glucanase; family 16, beta-jelly roll, bacterial endo-beta-1,3-glucanas hydrolase; 1.30A {Nocardiopsis SP} PDB: 3atg_A Back     alignment and structure
>3h0o_A Beta-glucanase; 1,3-1,4-beta-D-glucanase, CH-PI stacking interactions, TRIS inhibition, hydrolase, glycosidase; 1.40A {Fibrobacter succinogenes} SCOP: b.29.1.2 PDB: 1mve_A 1zm1_A* 2r4a_A 3hr9_A 2r49_A 3axd_A 3axe_A* Back     alignment and structure
>3rq0_A Glycosyl hydrolases family protein 16; structural genomics, PSI-biology; HET: PG4 211; 2.02A {Mycobacterium smegmatis} Back     alignment and structure
>1axk_A Gluxyn-1; bifunctional, fusion protein, 1,4-beta-xylanase, 1,3-1,4-beta-glucanase, hybrid enzyme; 2.10A {Bacillus subtilis} SCOP: b.29.1.2 b.29.1.11 Back     alignment and structure
>4ate_A Beta-porphyranase A; hydrolase, AGAR degradation; 1.10A {Zobellia galactanivorans} PDB: 3ilf_A* Back     alignment and structure
>3azy_A Laminarinase; beta-jelly roll fold, glycosyl hydrolase family 16, laminari endo-1,3-beta-glucanase, hydrolase; 1.65A {Thermotoga maritima} PDB: 3azx_A 3azz_A* 3b00_A* 3b01_A 4dfs_A Back     alignment and structure
>2vy0_A Endo-beta-1,3-glucanase; hydrolase, laminarin, endoglucanase, thermostable protein,; 2.16A {Pyrococcus furiosus} Back     alignment and structure
>3juu_A Porphyranase B; glycoside hydrolase family GH16, beta-sandwich fold, jelly roll, sugar binding protein, hydrolase-carbohydrate complex; HET: MES GOL; 1.80A {Zobellia galactanivorans} Back     alignment and structure
>1o4y_A Beta-agarase A; glycoside hydrolase family 16, agarose degradation, cleavage of beta-1, 4-D-galactose linkages; HET: SO4; 1.48A {Zobellia galactanivorans} SCOP: b.29.1.2 PDB: 1urx_A* Back     alignment and structure
>1dyp_A Kappa-carrageenase; hydrolase, kappa-carrageenan double helix degradation; HET: MSE; 1.54A {Pseudoalteromonas carrageenovora} SCOP: b.29.1.2 Back     alignment and structure
>3dgt_A Endo-1,3-beta-glucanase; GHF16, hydrolase, 1; 1.50A {Streptomyces sioyaensis} Back     alignment and structure
>4awd_A Beta-porphyranase; hydrolase; 2.40A {Bacteroides plebeius} Back     alignment and structure
>1o4z_A Beta-agarase B; glycoside hydrolase family 16, agarose degradation, cleavage of beta-1, 4-D-galactose linkages; HET: EPE; 2.30A {Zobellia galactanivorans} SCOP: b.29.1.2 Back     alignment and structure
>4atf_A Beta-agarase B; hydrolase, polysaccharidase, agarolytic enzyme; HET: AAL GAL; 1.90A {Zobellia galactanivorans} Back     alignment and structure
>1ups_A Glcnac-alpha-1,4-GAL-releasing endo-beta- galactosidase; endo-galactosidase, glycosyl hydrolase, PSI, protein structure initiative; 1.82A {Clostridium perfringens} SCOP: b.29.1.2 b.42.2.3 Back     alignment and structure
>1ajk_A CPA16M-84, circularly permuted (1-3,1-4)-beta-D-glucan 4- glucanohydrolase; glucanase, circular permutation; HET: EPE; 1.80A {Paenibacillus macerans} SCOP: b.29.1.2 Back     alignment and structure
>4asm_B Beta-agarase D; hydrolase, glycoside hydrolase, endo-beta-agarase; 1.50A {Zobellia galactanivorans} Back     alignment and structure
>2w39_A Putative laminarinase; hydrolase, white ROT fungus, glycosyl hydrolase, GH7, GH16, LAM16A, family 16, beta-glucan, basidiomycete; HET: NAG BGC LGC; 1.10A {Phanerochaete chrysosporium} PDB: 2cl2_A* 2w52_A* 2wlq_A* 2wne_A* Back     alignment and structure
>1ajo_A CPA16M-127, circularly permuted (1-3,1-4)-beta-D-glucan 4- glucanohydrolase CPA16M-127; glucanase, circular permutation; 2.07A {Paenibacillus macerans} SCOP: b.29.1.2 Back     alignment and structure
>1ajo_A CPA16M-127, circularly permuted (1-3,1-4)-beta-D-glucan 4- glucanohydrolase CPA16M-127; glucanase, circular permutation; 2.07A {Paenibacillus macerans} SCOP: b.29.1.2 Back     alignment and structure
>1ajk_A CPA16M-84, circularly permuted (1-3,1-4)-beta-D-glucan 4- glucanohydrolase; glucanase, circular permutation; HET: EPE; 1.80A {Paenibacillus macerans} SCOP: b.29.1.2 Back     alignment and structure
>3flp_A SAP-like pentraxin; physiological doubly-stacked heptamer, pentraxin fold, cyclic heptamer, invertebrate lectin, sugar binding protein; 2.30A {Limulus polyphemus} PDB: 3flr_A 3flt_A Back     alignment and structure
>3pvn_A C-reactive protein; pentraxin family, immune system; 1.98A {Homo sapiens} SCOP: b.29.1.5 PDB: 1gnh_A 1lj7_A 3l2y_A 1b09_A 3pvo_A Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 293
d1umza_267 b.29.1.2 (A:) Xyloglucan endotransglycosylase {Eur 1e-125
d1ajka_214 b.29.1.2 (A:) Bacillus 1-3,1-4-beta-glucanase {Bac 2e-44
d1mvea_243 b.29.1.2 (A:) Bacillus 1-3,1-4-beta-glucanase {Fib 6e-24
d2ayha_214 b.29.1.2 (A:) Bacillus 1-3,1-4-beta-glucanase {syn 2e-20
d1dypa_271 b.29.1.2 (A:) kappa-Carrageenase, catalytic {Pseud 6e-12
d1o4ya_270 b.29.1.2 (A:) beta-Agarase A {Zobellia galactanivo 1e-08
d1upsa1266 b.29.1.2 (A:19-284) GlcNAc-alpha-1,4-Gal-releasing 0.001
>d1umza_ b.29.1.2 (A:) Xyloglucan endotransglycosylase {European aspen (Populus tremula) [TaxId: 113636]} Length = 267 Back     information, alignment and structure

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Glycosyl hydrolases family 16
domain: Xyloglucan endotransglycosylase
species: European aspen (Populus tremula) [TaxId: 113636]

 Score =  355 bits (911), Expect = e-125
 Identities = 238/267 (89%), Positives = 251/267 (94%)

Query: 27  PIDVPFGRNYVPTWAFDHIKYFNGGSEIQLVLDKYTGTGFQSKGSYLFGHFSMHIKMVPG 86
           P+DV FGRNYVPTWAFDHIKYFNGG+EIQL LDKYTGTGFQSKGSYLFGHFSM +K+VPG
Sbjct: 1   PVDVAFGRNYVPTWAFDHIKYFNGGNEIQLHLDKYTGTGFQSKGSYLFGHFSMQMKLVPG 60

Query: 87  DSAGTVTAFYLSSQNSEHDEIDFEFLGNRTGQPYILQTNVYTGGKGDKEQRIYLWFDPTK 146
           DSAGTVTAFYLSSQNSEHDEIDFEFLGNRTGQPYILQTNV+TGGKGD+EQRIYLWFDPTK
Sbjct: 61  DSAGTVTAFYLSSQNSEHDEIDFEFLGNRTGQPYILQTNVFTGGKGDREQRIYLWFDPTK 120

Query: 147 EFHTYSVLWNMYQIVFLVDDVPIRVFKNSKDLGVRFPFNQPMKIYSSLWNADDWATRGGL 206
           EFH YSVLWNMY IVFLVDDVPIRVFKN KDLGV+FPFNQPMKIYSSLWNADDWATRGGL
Sbjct: 121 EFHYYSVLWNMYMIVFLVDDVPIRVFKNCKDLGVKFPFNQPMKIYSSLWNADDWATRGGL 180

Query: 207 EKTDWSKAPFIASYKGFHVDGCEVSVNAKFCETQGKRWWDQKAFQDLDAYQYRRLRWVRQ 266
           EKTDWSKAPFIASY+ FH+DGCE SV AKFC TQG RWWDQK FQDLDA+QYRRL WVRQ
Sbjct: 181 EKTDWSKAPFIASYRSFHIDGCEASVEAKFCATQGARWWDQKEFQDLDAFQYRRLSWVRQ 240

Query: 267 KYTIYNYCNDRARFPTPSPECKRDRDI 293
           KYTIYNYC DR+R+P+  PECKRDRDI
Sbjct: 241 KYTIYNYCTDRSRYPSMPPECKRDRDI 267
>d1ajka_ b.29.1.2 (A:) Bacillus 1-3,1-4-beta-glucanase {Bacillus macerans [TaxId: 44252]} Length = 214 Back     information, alignment and structure
>d1mvea_ b.29.1.2 (A:) Bacillus 1-3,1-4-beta-glucanase {Fibrobacter succinogenes [TaxId: 833]} Length = 243 Back     information, alignment and structure
>d2ayha_ b.29.1.2 (A:) Bacillus 1-3,1-4-beta-glucanase {synthetic, hybrid between Bacillus amyloliquefaciens and Bacillus macerans proteins} Length = 214 Back     information, alignment and structure
>d1dypa_ b.29.1.2 (A:) kappa-Carrageenase, catalytic {Pseudoalteromonas carrageenovora [TaxId: 227]} Length = 271 Back     information, alignment and structure
>d1o4ya_ b.29.1.2 (A:) beta-Agarase A {Zobellia galactanivorans [TaxId: 63186]} Length = 270 Back     information, alignment and structure
>d1upsa1 b.29.1.2 (A:19-284) GlcNAc-alpha-1,4-Gal-releasing endo-beta-galactosidase, GngC, catalytic domain {Clostridium perfringens [TaxId: 1502]} Length = 266 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query293
d1umza_267 Xyloglucan endotransglycosylase {European aspen (P 100.0
d1ajka_214 Bacillus 1-3,1-4-beta-glucanase {Bacillus macerans 100.0
d2ayha_214 Bacillus 1-3,1-4-beta-glucanase {synthetic, hybrid 100.0
d1mvea_243 Bacillus 1-3,1-4-beta-glucanase {Fibrobacter succi 100.0
d1dypa_271 kappa-Carrageenase, catalytic {Pseudoalteromonas c 99.97
d1o4ya_270 beta-Agarase A {Zobellia galactanivorans [TaxId: 6 99.97
d1o4za_295 beta-Agarase A {Zobellia galactanivorans [TaxId: 6 99.96
d1upsa1266 GlcNAc-alpha-1,4-Gal-releasing endo-beta-galactosi 99.96
d2slia1196 Leech intramolecular trans-sialidase, N-terminal d 94.65
d1epwa1218 Botulinum neurotoxin {Clostridium botulinum, serot 92.1
d1b09a_206 C-reactive protein (CRP) {Human (Homo sapiens) [Ta 91.97
d1a8da1247 Tetanus neurotoxin {Clostridium tetani [TaxId: 151 90.69
d2erfa1206 Thrombospondin 1 N-terminal domain {Human (Homo sa 89.46
d1oq1a_223 Hypothetical protein YesU {Bacillus subtilis [TaxI 89.35
d3btaa1207 Botulinum neurotoxin {Clostridium botulinum, serot 88.33
d1ajka_214 Bacillus 1-3,1-4-beta-glucanase {Bacillus macerans 87.62
d1saca_204 Serum amyloid P component (SAP) {Human (Homo sapie 87.07
d1w0pa2197 Vibrio cholerae sialidase, N-terminal and insertio 83.06
d1w0pa1192 Vibrio cholerae sialidase, N-terminal and insertio 82.49
>d1umza_ b.29.1.2 (A:) Xyloglucan endotransglycosylase {European aspen (Populus tremula) [TaxId: 113636]} Back     information, alignment and structure
class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Glycosyl hydrolases family 16
domain: Xyloglucan endotransglycosylase
species: European aspen (Populus tremula) [TaxId: 113636]

Probab=100.00  E-value=1.6e-82  Score=582.89  Aligned_cols=266  Identities=89%  Similarity=1.551  Sum_probs=253.9

Q ss_pred             cCCCcccCCcccccCCCeEEecCCcEEEEEEeCCCccEEEEccceEEEEEEEEEEecCCCCCceEEEEEEeecCCCCCeE
Q 022696           28 IDVPFGRNYVPTWAFDHIKYFNGGSEIQLVLDKYTGTGFQSKGSYLFGHFSMHIKMVPGDSAGTVTAFYLSSQNSEHDEI  107 (293)
Q Consensus        28 ~~~~f~~~f~~~w~~~nv~~~~~G~~l~L~ld~~tga~i~Sk~~~~yG~~eariKlp~g~s~G~v~AFwl~~~~~~~~EI  107 (293)
                      +..+|+++|.++|+.+||++.++|..|+|+||+.+||+|+||+.|+||+||||||||+|+++|++++||+++.++.++||
T Consensus         2 ~~~~f~~~~~~~w~~~~v~~~~~g~~l~l~ld~~sga~i~Sk~~f~YG~~EariKlp~G~g~g~~~~f~~~s~~~~~dEI   81 (267)
T d1umza_           2 VDVAFGRNYVPTWAFDHIKYFNGGNEIQLHLDKYTGTGFQSKGSYLFGHFSMQMKLVPGDSAGTVTAFYLSSQNSEHDEI   81 (267)
T ss_dssp             CCCCHHHHEEEEECGGGEEEEGGGTEEEEEECSSCCEEEEESSCEEEEEEEEEEECCCSCCTTEEEEEEEECSSSSCCEE
T ss_pred             ccccCCCCceecCCCCCEEEeCCCeEEEEEECCcccCceEecceEEeeEEEEEEEcCCCCccEEEEEeeecCCCCCCCeE
Confidence            46789999999999999999999999999999999999999999999999999999999888999999999888889999


Q ss_pred             EEEEcCCCCCCceEEEcccccCCCCCcceeEeccCCCCCCcEEEEEEEcCCeEEEEECCeEEEEEEeccCCCCCCCCCCC
Q 022696          108 DFEFLGNRTGQPYILQTNVYTGGKGDKEQRIYLWFDPTKEFHTYSVLWNMYQIVFLVDDVPIRVFKNSKDLGVRFPFNQP  187 (293)
Q Consensus       108 DiE~lG~~~g~p~~vqtN~~~~g~g~re~~~~l~fdp~~dfHtY~i~Wtp~~I~fyVDg~~vr~~~~~~~~g~~~P~~~P  187 (293)
                      |||++|+..++++++|||+|.+|.+++++++.+++|++++||+|+|+|+|++|+|||||++||++++.+..+.++|+++|
T Consensus        82 DiE~lG~~~~~~~~v~tn~~~~g~g~~~~~~~~~~d~s~dFHtY~i~Wtp~~I~fyVDG~~vr~~~n~~~~g~~~p~~~p  161 (267)
T d1umza_          82 DFEFLGNRTGQPYILQTNVFTGGKGDREQRIYLWFDPTKEFHYYSVLWNMYMIVFLVDDVPIRVFKNCKDLGVKFPFNQP  161 (267)
T ss_dssp             EEEEECCSTTSCCEEEEEEEBTTBCCCCEEECCSSCTTTSCEEEEEEECSSEEEEEETTEEEEEEECCGGGTCCCSCSSC
T ss_pred             EEEEecccCCcccEEEeeEeCCCCCCcceeEecCCCCccCcEEEEEEECcceEEEEECCEEEEEEeccccCCCCCCcceE
Confidence            99999999999999999999999999999999999999999999999999999999999999999998888889999999


Q ss_pred             cEEEEEeecCCCccCCCCCcccCCCCCCEEEEEeEEEEeeeeeCCCCCccccCCcccccccccCCCCHHHHHHHHHHhhc
Q 022696          188 MKIYSSLWNADDWATRGGLEKTDWSKAPFIASYKGFHVDGCEVSVNAKFCETQGKRWWDQKAFQDLDAYQYRRLRWVRQK  267 (293)
Q Consensus       188 m~l~lnlw~gg~Wat~GG~~~~d~~~~Pf~a~~~~~~v~~c~~~~~~~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~  267 (293)
                      |+|++|||+||+|||+||++++||+++||+|.|++|+|.+|.+......|...+..||++..+++|+.+|+++|+|||+|
T Consensus       162 m~i~~niW~g~~Wat~gG~~~~d~~~aPf~a~~~~~~v~~c~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~  241 (267)
T d1umza_         162 MKIYSSLWNADDWATRGGLEKTDWSKAPFIASYRSFHIDGCEASVEAKFCATQGARWWDQKEFQDLDAFQYRRLSWVRQK  241 (267)
T ss_dssp             BEEEEEEEECTTTSSGGGTSCCCGGGCCEEEEEEEEEEEEEECCSSSCCCTTTTCSGGGSGGGSSCCHHHHHHHHHHHHH
T ss_pred             EEEEEeeeeCCCccccCCeeeecCCCCCEEEEEEEEEEEecccCCCCcccCCCCCccccccccccCCHHHHHHHHHHHHC
Confidence            99999999999999999999999999999999999999999987766667766778999999999999999999999999


Q ss_pred             CeeeecccCCCCCCCCCCCCcCCCCC
Q 022696          268 YTIYNYCNDRARFPTPSPECKRDRDI  293 (293)
Q Consensus       268 ~~~y~yc~d~~r~~~~~~ec~~~~~~  293 (293)
                      ||+||||+|++|||.+||||.+|+++
T Consensus       242 ~~~y~yC~d~~r~~~~p~EC~~~~~~  267 (267)
T d1umza_         242 YTIYNYCTDRSRYPSMPPECKRDRDI  267 (267)
T ss_dssp             TEEEEGGGCTTTCSSCCTHHHHHTCC
T ss_pred             CcEEccCCCCCcCCCCCcccCCCCCC
Confidence            99999999999999999999988764
>d1ajka_ b.29.1.2 (A:) Bacillus 1-3,1-4-beta-glucanase {Bacillus macerans [TaxId: 44252]} Back     information, alignment and structure
>d2ayha_ b.29.1.2 (A:) Bacillus 1-3,1-4-beta-glucanase {synthetic, hybrid between Bacillus amyloliquefaciens and Bacillus macerans proteins} Back     information, alignment and structure
>d1mvea_ b.29.1.2 (A:) Bacillus 1-3,1-4-beta-glucanase {Fibrobacter succinogenes [TaxId: 833]} Back     information, alignment and structure
>d1dypa_ b.29.1.2 (A:) kappa-Carrageenase, catalytic {Pseudoalteromonas carrageenovora [TaxId: 227]} Back     information, alignment and structure
>d1o4ya_ b.29.1.2 (A:) beta-Agarase A {Zobellia galactanivorans [TaxId: 63186]} Back     information, alignment and structure
>d1o4za_ b.29.1.2 (A:) beta-Agarase A {Zobellia galactanivorans [TaxId: 63186]} Back     information, alignment and structure
>d1upsa1 b.29.1.2 (A:19-284) GlcNAc-alpha-1,4-Gal-releasing endo-beta-galactosidase, GngC, catalytic domain {Clostridium perfringens [TaxId: 1502]} Back     information, alignment and structure
>d2slia1 b.29.1.9 (A:81-276) Leech intramolecular trans-sialidase, N-terminal domain {North american leech (Macrobdella decora) [TaxId: 6405]} Back     information, alignment and structure
>d1epwa1 b.29.1.6 (A:862-1079) Botulinum neurotoxin {Clostridium botulinum, serotype B [TaxId: 1491]} Back     information, alignment and structure
>d1b09a_ b.29.1.5 (A:) C-reactive protein (CRP) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1a8da1 b.29.1.6 (A:1-247) Tetanus neurotoxin {Clostridium tetani [TaxId: 1513]} Back     information, alignment and structure
>d2erfa1 b.29.1.4 (A:10-215) Thrombospondin 1 N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1oq1a_ b.29.1.17 (A:) Hypothetical protein YesU {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d3btaa1 b.29.1.6 (A:872-1078) Botulinum neurotoxin {Clostridium botulinum, serotype A [TaxId: 1491]} Back     information, alignment and structure
>d1ajka_ b.29.1.2 (A:) Bacillus 1-3,1-4-beta-glucanase {Bacillus macerans [TaxId: 44252]} Back     information, alignment and structure
>d1saca_ b.29.1.5 (A:) Serum amyloid P component (SAP) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1w0pa2 b.29.1.8 (A:347-543) Vibrio cholerae sialidase, N-terminal and insertion domains {Vibrio cholerae [TaxId: 666]} Back     information, alignment and structure
>d1w0pa1 b.29.1.8 (A:25-216) Vibrio cholerae sialidase, N-terminal and insertion domains {Vibrio cholerae [TaxId: 666]} Back     information, alignment and structure