Citrus Sinensis ID: 022721

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290---
MIEVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKGPGGGSVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVALLAKYSSDPEGEAPLKLLLPQITSCFSSEKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVASAHGKTDNELSKLSGVMKYEYRVALRSSLRSDFAEGVRAVLVDKDQNPKWNPASLEEVNQSEVEALFEPLGTGVEELKV
cHHHHHHHHHHHHHHHHccccEEEEEcccccccccccccccccEEEccccccccccccccccccccHHHHHcccccccccHHHHHccccccccHHHHHHHcccccccccccHHHHHHHHHHcccccccHHHHHHHHHHHccccccccHHHHcHHHHHHHHcccccHHHHHHHHHcccccccccHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHccccccccccEEEEcccccccccccccccccHHHHHHcccccccccccccc
ccHHHHHHHHHHHHHHcccccEEEEEccEEEccccEEEEcccEEEEEccEEEccccccEcccccccHHHEcccccccccEEEEEEEcccccccHHHHHHHccccccccHHHHHHHHHHHHHccccccHHHHHHHHHHHHccccccccHHHHHHHHHHHHccccccHHHHHHHHHHccccccccHHHHHHHHHHHHHHcccHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHHHHHcccccccEEEEEEEcccccccccccHHHccHHHHHHHHcccccccccccc
MIEVFTAEYSLICKIseykkpyislmdgvtmgfgigisghgryriVTEKTllampengiglfpdvgfsyiaakgpgggsvGAYLGMtgkristpsdalfaglgtdyvpsgnlgslKEALLAVTFSEDPHQDIVALLAKyssdpegeaplklllpqitscfssEKSVRQIIEELKKHQSSAETSVAQWADEALqgmgkgapfslcLTQKYFSKVAsahgktdnelsklsgvMKYEYRVALRSSLRSDFAEGVRAVLvdkdqnpkwnpasleevnQSEVEALfeplgtgveelkv
MIEVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKGPGGGSVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVALLAKYSSDPEGEAPLKLLLPQITSCFSSEKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVAsahgktdnelsklsgvMKYEYRVALRSSLRSDFAEGVRAVLvdkdqnpkwnpasleevnqsevealfeplgtgveelkv
MIEVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKGPGGGSVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVALLAKYSSDPEGEAPLKLLLPQITSCFSSEKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVASAHGKTDNELSKLSGVMKYEYRVALRSSLRSDFAEGVRAVLVDKDQNPKWNPASLEEVNQSEVEALFEPLGTGVEELKV
**EVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKGPGGGSVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVALLAKY*********LKLLLPQITSCFS*************************WADEALQGMGKGAPFSLCLTQKYFSKVASAHG****ELSKLSGVMKYEYRVALRSSLRSDFAEGVRAVLV*************************************
MIEVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKGPGGGSVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVALLAKYS*********KLLLPQITSCFSSEKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVASAHGKTDNELSKLSGVMKYEYRVALRSSLRSDFAEGVRAVLVDKDQNPKWNPASLEEVNQSEVEALFEPLGT***ELK*
MIEVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKGPGGGSVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVALLAKYSSDPEGEAPLKLLLPQITSCFSSEKSVRQIIEE***********VAQWADEALQGMGKGAPFSLCLTQKYFSKVASAHGKTDNELSKLSGVMKYEYRVALRSSLRSDFAEGVRAVLVDKDQNPKWNPASLEEVNQSEVEALFEPLGTGVEELKV
MIEVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKGPGGGSVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVALLAKYSSDPEGEAPLKLLLPQITSCFSSEKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVASAHGKTDNELSKLSGVMKYEYRVALRSSLRSDFAEGVRAVLVDKDQNPKWNPASLEEVNQSEVEALFEPLGT*******
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oooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
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ooooooooooooooooooooooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
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MIEVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKGPGGGSVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVALLAKYSSDPEGEAPLKLLLPQITSCFSSEKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVASAHGKTDNELSKLSGVMKYEYRVALRSSLRSDFAEGVRAVLVDKDQNPKWNPASLEEVNQSEVEALFEPLGTGVEELKV
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query293 2.2.26 [Sep-21-2011]
Q9T0K7421 3-hydroxyisobutyryl-CoA h yes no 0.993 0.691 0.738 1e-127
Q9LK08418 3-hydroxyisobutyryl-CoA h no no 0.993 0.696 0.725 1e-124
Q5ZJ60385 3-hydroxyisobutyryl-CoA h yes no 0.897 0.683 0.391 2e-44
Q8QZS1385 3-hydroxyisobutyryl-CoA h yes no 0.894 0.680 0.371 6e-43
Q6NVY1386 3-hydroxyisobutyryl-CoA h yes no 0.887 0.673 0.377 4e-42
Q5XIE6385 3-hydroxyisobutyryl-CoA h yes no 0.894 0.680 0.368 1e-41
Q28FR6385 3-hydroxyisobutyryl-CoA h yes no 0.890 0.677 0.394 8e-41
Q9LKJ1378 3-hydroxyisobutyryl-CoA h no no 0.887 0.687 0.368 2e-40
A2VDC2385 3-hydroxyisobutyryl-CoA h N/A no 0.890 0.677 0.391 5e-40
Q6NMB0378 Probable 3-hydroxyisobuty no no 0.890 0.690 0.339 9e-39
>sp|Q9T0K7|HIBC6_ARATH 3-hydroxyisobutyryl-CoA hydrolase-like protein 3, mitochondrial OS=Arabidopsis thaliana GN=At4g13360 PE=1 SV=2 Back     alignment and function desciption
 Score =  454 bits (1169), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 215/291 (73%), Positives = 251/291 (86%)

Query: 3   EVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLF 62
           +VFTAEY+LIC I+ YKKPYISLMDG+TMGFG+G+SGHGRYR++TE+T+LAMPENGIGLF
Sbjct: 131 KVFTAEYTLICAIAAYKKPYISLMDGITMGFGLGLSGHGRYRVITERTVLAMPENGIGLF 190

Query: 63  PDVGFSYIAAKGPGGGSVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAV 122
           PDVGFSYIAA  PGGGSVGAYLG+TGKRIS PSDALF GLGT YVPS  L SLKEA+L+ 
Sbjct: 191 PDVGFSYIAAHSPGGGSVGAYLGLTGKRISAPSDALFVGLGTHYVPSEKLASLKEAILSA 250

Query: 123 TFSEDPHQDIVALLAKYSSDPEGEAPLKLLLPQITSCFSSEKSVRQIIEELKKHQSSAET 182
             SEDP+QDI A L+KYSS+PE EA LK LLP I S FSS KS+++ IEELKK+Q S E+
Sbjct: 251 NLSEDPNQDIQATLSKYSSNPESEAHLKSLLPHIESAFSSNKSIKETIEELKKYQQSTES 310

Query: 183 SVAQWADEALQGMGKGAPFSLCLTQKYFSKVASAHGKTDNELSKLSGVMKYEYRVALRSS 242
           SV +WA+EAL+G+ KGAPFSL LTQKYFS VA A  K +NEL+ L+GVMK EYR+ALRS+
Sbjct: 311 SVVEWANEALKGLEKGAPFSLYLTQKYFSNVACAKSKPENELATLNGVMKTEYRIALRSA 370

Query: 243 LRSDFAEGVRAVLVDKDQNPKWNPASLEEVNQSEVEALFEPLGTGVEELKV 293
           LR DFAEGVRAVL+DKDQNPKWNP S+EEV+++EVEALF+PL   VEELKV
Sbjct: 371 LRGDFAEGVRAVLIDKDQNPKWNPTSIEEVDENEVEALFKPLSPEVEELKV 421

Arabidopsis thaliana (taxid: 3702)
EC: 3EC: .EC: 1EC: .EC: 2EC: .EC: -
>sp|Q9LK08|HIBC7_ARATH 3-hydroxyisobutyryl-CoA hydrolase-like protein 4, mitochondrial OS=Arabidopsis thaliana GN=At3g24360 PE=2 SV=1 Back     alignment and function description
>sp|Q5ZJ60|HIBCH_CHICK 3-hydroxyisobutyryl-CoA hydrolase, mitochondrial OS=Gallus gallus GN=HIBCH PE=2 SV=1 Back     alignment and function description
>sp|Q8QZS1|HIBCH_MOUSE 3-hydroxyisobutyryl-CoA hydrolase, mitochondrial OS=Mus musculus GN=Hibch PE=1 SV=1 Back     alignment and function description
>sp|Q6NVY1|HIBCH_HUMAN 3-hydroxyisobutyryl-CoA hydrolase, mitochondrial OS=Homo sapiens GN=HIBCH PE=1 SV=2 Back     alignment and function description
>sp|Q5XIE6|HIBCH_RAT 3-hydroxyisobutyryl-CoA hydrolase, mitochondrial OS=Rattus norvegicus GN=Hibch PE=1 SV=2 Back     alignment and function description
>sp|Q28FR6|HIBCH_XENTR 3-hydroxyisobutyryl-CoA hydrolase, mitochondrial OS=Xenopus tropicalis GN=hibch PE=2 SV=1 Back     alignment and function description
>sp|Q9LKJ1|HIBC1_ARATH 3-hydroxyisobutyryl-CoA hydrolase 1 OS=Arabidopsis thaliana GN=CHY1 PE=1 SV=1 Back     alignment and function description
>sp|A2VDC2|HIBCH_XENLA 3-hydroxyisobutyryl-CoA hydrolase, mitochondrial OS=Xenopus laevis GN=hibch PE=2 SV=1 Back     alignment and function description
>sp|Q6NMB0|HIBC3_ARATH Probable 3-hydroxyisobutyryl-CoA hydrolase 3 OS=Arabidopsis thaliana GN=At2g30660 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query293
255549046 416 3-hydroxybutyryl-CoA dehydratase, putati 1.0 0.704 0.791 1e-136
359484614 421 PREDICTED: 3-hydroxyisobutyryl-CoA hydro 1.0 0.695 0.791 1e-134
297738862 407 unnamed protein product [Vitis vinifera] 1.0 0.719 0.791 1e-134
359484612 425 PREDICTED: 3-hydroxyisobutyryl-CoA hydro 0.993 0.684 0.790 1e-133
449443139 424 PREDICTED: 3-hydroxyisobutyryl-CoA hydro 0.962 0.665 0.780 1e-131
356513121373 PREDICTED: 3-hydroxyisobutyryl-CoA hydro 1.0 0.785 0.771 1e-129
224088081380 predicted protein [Populus trichocarpa] 0.979 0.755 0.777 1e-128
118489716382 unknown [Populus trichocarpa x Populus d 0.979 0.751 0.773 1e-128
356513119 408 PREDICTED: 3-hydroxyisobutyryl-CoA hydro 0.993 0.713 0.766 1e-127
356524057 408 PREDICTED: 3-hydroxyisobutyryl-CoA hydro 0.993 0.713 0.756 1e-127
>gi|255549046|ref|XP_002515579.1| 3-hydroxybutyryl-CoA dehydratase, putative [Ricinus communis] gi|223545523|gb|EEF47028.1| 3-hydroxybutyryl-CoA dehydratase, putative [Ricinus communis] Back     alignment and taxonomy information
 Score =  491 bits (1265), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 232/293 (79%), Positives = 266/293 (90%)

Query: 1   MIEVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIG 60
           MIEVFTAEYSLICKIS+YKKPYIS MDG+TMGFG+G+SGHGRYR+VTE+T+LAMPENGIG
Sbjct: 124 MIEVFTAEYSLICKISDYKKPYISFMDGITMGFGLGLSGHGRYRVVTERTVLAMPENGIG 183

Query: 61  LFPDVGFSYIAAKGPGGGSVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALL 120
           LFPDVGFSYIAA  PG GSVGAYLG+TGKRISTPSDALF GLGT +VPSGNLGS+KEAL 
Sbjct: 184 LFPDVGFSYIAAHSPGEGSVGAYLGLTGKRISTPSDALFVGLGTHFVPSGNLGSVKEALF 243

Query: 121 AVTFSEDPHQDIVALLAKYSSDPEGEAPLKLLLPQITSCFSSEKSVRQIIEELKKHQSSA 180
           ++TFS+DP+ DI ALLAKYS++PE EA LKLLLPQI S FS+  SV++I EELKKHQ SA
Sbjct: 244 SMTFSQDPNDDIKALLAKYSNEPESEAELKLLLPQIISTFSASNSVKEITEELKKHQQSA 303

Query: 181 ETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVASAHGKTDNELSKLSGVMKYEYRVALR 240
           +T VA+WA +ALQG+GKGAPFSLCLTQKYFSKVASA+GK ++ELS L+GVMK EYR+ALR
Sbjct: 304 DTKVAEWASDALQGLGKGAPFSLCLTQKYFSKVASAYGKPNSELSTLNGVMKTEYRIALR 363

Query: 241 SSLRSDFAEGVRAVLVDKDQNPKWNPASLEEVNQSEVEALFEPLGTGVEELKV 293
           SSLR+DFAEGVRAVLVDKDQ PKWNP SLE+++Q+EVE+LFEPL   VEELKV
Sbjct: 364 SSLRNDFAEGVRAVLVDKDQKPKWNPPSLEDIDQNEVESLFEPLSPEVEELKV 416

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|359484614|ref|XP_002284721.2| PREDICTED: 3-hydroxyisobutyryl-CoA hydrolase-like protein 3, mitochondrial-like isoform 1 [Vitis vinifera] Back     alignment and taxonomy information
>gi|297738862|emb|CBI28107.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|359484612|ref|XP_003633131.1| PREDICTED: 3-hydroxyisobutyryl-CoA hydrolase-like protein 3, mitochondrial-like isoform 2 [Vitis vinifera] Back     alignment and taxonomy information
>gi|449443139|ref|XP_004139338.1| PREDICTED: 3-hydroxyisobutyryl-CoA hydrolase-like protein 3, mitochondrial-like [Cucumis sativus] gi|449518115|ref|XP_004166089.1| PREDICTED: 3-hydroxyisobutyryl-CoA hydrolase-like protein 3, mitochondrial-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|356513121|ref|XP_003525262.1| PREDICTED: 3-hydroxyisobutyryl-CoA hydrolase-like protein 3, mitochondrial-like isoform 2 [Glycine max] Back     alignment and taxonomy information
>gi|224088081|ref|XP_002308317.1| predicted protein [Populus trichocarpa] gi|222854293|gb|EEE91840.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|118489716|gb|ABK96659.1| unknown [Populus trichocarpa x Populus deltoides] Back     alignment and taxonomy information
>gi|356513119|ref|XP_003525261.1| PREDICTED: 3-hydroxyisobutyryl-CoA hydrolase-like protein 3, mitochondrial-like isoform 1 [Glycine max] Back     alignment and taxonomy information
>gi|356524057|ref|XP_003530649.1| PREDICTED: 3-hydroxyisobutyryl-CoA hydrolase-like protein 3, mitochondrial-like [Glycine max] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query293
TAIR|locus:2142050421 AT4G13360 [Arabidopsis thalian 0.993 0.691 0.738 1.7e-114
TAIR|locus:2087218418 AT3G24360 [Arabidopsis thalian 0.993 0.696 0.725 3.3e-111
TAIR|locus:2152069378 CHY1 "beta-hydroxyisobutyryl-C 0.897 0.695 0.362 2.6e-38
TAIR|locus:2054437378 AT2G30660 [Arabidopsis thalian 0.904 0.701 0.345 4.9e-37
ASPGD|ASPL0000005013505 AN6844 [Emericella nidulans (t 0.928 0.538 0.342 4.4e-36
TAIR|locus:2054517378 AT2G30650 [Arabidopsis thalian 0.931 0.722 0.353 4.4e-36
FB|FBgn0038326386 CG5044 [Drosophila melanogaste 0.638 0.484 0.405 6e-32
TAIR|locus:2009180387 AT1G06550 [Arabidopsis thalian 0.904 0.684 0.314 2e-31
UNIPROTKB|Q48KW7365 PSPPH_1721 "Enoly-CoA hydratas 0.890 0.715 0.321 6.9e-31
DICTYBASE|DDB_G0267598407 DDB_G0267598 "enoyl-CoA hydrat 0.924 0.665 0.299 4.9e-30
TAIR|locus:2142050 AT4G13360 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1129 (402.5 bits), Expect = 1.7e-114, P = 1.7e-114
 Identities = 215/291 (73%), Positives = 251/291 (86%)

Query:     3 EVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLF 62
             +VFTAEY+LIC I+ YKKPYISLMDG+TMGFG+G+SGHGRYR++TE+T+LAMPENGIGLF
Sbjct:   131 KVFTAEYTLICAIAAYKKPYISLMDGITMGFGLGLSGHGRYRVITERTVLAMPENGIGLF 190

Query:    63 PDVGFSYIAAKGPGGGSVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAV 122
             PDVGFSYIAA  PGGGSVGAYLG+TGKRIS PSDALF GLGT YVPS  L SLKEA+L+ 
Sbjct:   191 PDVGFSYIAAHSPGGGSVGAYLGLTGKRISAPSDALFVGLGTHYVPSEKLASLKEAILSA 250

Query:   123 TFSEDPHQDIVALLAKYSSDPEGEAPLKLLLPQITSCFSSEKSVRQIIEELKKHQSSAET 182
               SEDP+QDI A L+KYSS+PE EA LK LLP I S FSS KS+++ IEELKK+Q S E+
Sbjct:   251 NLSEDPNQDIQATLSKYSSNPESEAHLKSLLPHIESAFSSNKSIKETIEELKKYQQSTES 310

Query:   183 SVAQWADEALQGMGKGAPFSLCLTQKYFSKVASAHGKTDNELSKLSGVMKYEYRVALRSS 242
             SV +WA+EAL+G+ KGAPFSL LTQKYFS VA A  K +NEL+ L+GVMK EYR+ALRS+
Sbjct:   311 SVVEWANEALKGLEKGAPFSLYLTQKYFSNVACAKSKPENELATLNGVMKTEYRIALRSA 370

Query:   243 LRSDFAEGVRAVLVDKDQNPKWNPASLEEVNQSEVEALFEPLGTGVEELKV 293
             LR DFAEGVRAVL+DKDQNPKWNP S+EEV+++EVEALF+PL   VEELKV
Sbjct:   371 LRGDFAEGVRAVLIDKDQNPKWNPTSIEEVDENEVEALFKPLSPEVEELKV 421
GO:0003824 "catalytic activity" evidence=IEA;ISS
GO:0005739 "mitochondrion" evidence=ISM
GO:0008152 "metabolic process" evidence=IEA;ISS
GO:0005829 "cytosol" evidence=IDA
TAIR|locus:2087218 AT3G24360 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2152069 CHY1 "beta-hydroxyisobutyryl-CoA hydrolase 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2054437 AT2G30660 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
ASPGD|ASPL0000005013 AN6844 [Emericella nidulans (taxid:162425)] Back     alignment and assigned GO terms
TAIR|locus:2054517 AT2G30650 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
FB|FBgn0038326 CG5044 [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
TAIR|locus:2009180 AT1G06550 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
UNIPROTKB|Q48KW7 PSPPH_1721 "Enoly-CoA hydratase/isomerase family protein" [Pseudomonas syringae pv. phaseolicola 1448A (taxid:264730)] Back     alignment and assigned GO terms
DICTYBASE|DDB_G0267598 DDB_G0267598 "enoyl-CoA hydratase/isomerase domain-containing protein" [Dictyostelium discoideum (taxid:44689)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q9T0K7HIBC6_ARATH3, ., 1, ., 2, ., -0.73880.99310.6912yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer3.1.2LOW CONFIDENCE prediction!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query293
PRK05617342 PRK05617, PRK05617, 3-hydroxyisobutyryl-CoA hydrol 7e-92
PLN02874379 PLN02874, PLN02874, 3-hydroxyisobutyryl-CoA hydrol 1e-51
PLN02988381 PLN02988, PLN02988, 3-hydroxyisobutyryl-CoA hydrol 2e-46
PLN02851407 PLN02851, PLN02851, 3-hydroxyisobutyryl-CoA hydrol 7e-40
PLN02157401 PLN02157, PLN02157, 3-hydroxyisobutyryl-CoA hydrol 3e-37
pfam13766117 pfam13766, ECH_C, 2-enoyl-CoA Hydratase C-terminal 5e-36
cd06558195 cd06558, crotonase-like, Crotonase/Enoyl-Coenzyme 2e-18
COG1024257 COG1024, CaiD, Enoyl-CoA hydratase/carnithine race 4e-13
PRK06072248 PRK06072, PRK06072, enoyl-CoA hydratase; Provision 6e-06
PRK06688259 PRK06688, PRK06688, enoyl-CoA hydratase; Provision 7e-04
TIGR02441 737 TIGR02441, fa_ox_alpha_mit, fatty acid oxidation c 0.002
pfam00378245 pfam00378, ECH, Enoyl-CoA hydratase/isomerase fami 0.004
>gnl|CDD|235533 PRK05617, PRK05617, 3-hydroxyisobutyryl-CoA hydrolase; Provisional Back     alignment and domain information 
 Score =  275 bits (706), Expect = 7e-92
 Identities = 114/279 (40%), Positives = 161/279 (57%), Gaps = 22/279 (7%)

Query: 5   FTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPD 64
           F  EY L   I+ Y KPYI+LMDG+ MG G+GIS HG +RIVTE+T +AMPE GIG FPD
Sbjct: 86  FREEYRLNALIARYPKPYIALMDGIVMGGGVGISAHGSHRIVTERTKMAMPETGIGFFPD 145

Query: 65  VGFSYIAAKGPGGGSVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTF 124
           VG +Y  ++ PG   +G YL +TG RIS  +DAL+AGL   +VPS +L +L +AL+++ +
Sbjct: 146 VGGTYFLSRAPGA--LGTYLALTGARIS-AADALYAGLADHFVPSADLPALLDALISLRW 202

Query: 125 SEDPHQDIVALLAKYSSDPEGEAPLKLLLPQITSCFSSEKSVRQIIEELKKHQSSAETSV 184
                  + A LA +++       L      I  CF+ + +V  II  L+          
Sbjct: 203 DSGA-DVVDAALAAFATPAPAS-ELAAQRAWIDECFAGD-TVEDIIAALEADGG------ 253

Query: 185 AQWADEALQGMGKGAPFSLCLTQKYFSKVASAHGKTDNELSKLSGVMKYEYRVALRSSLR 244
            ++A +    +   +P SL +T     ++  A G T      L   ++ E R+AL     
Sbjct: 254 -EFAAKTADTLRSRSPTSLKVT---LEQLRRARGLT------LEECLRRELRLALAMLRS 303

Query: 245 SDFAEGVRAVLVDKDQNPKWNPASLEEVNQSEVEALFEP 283
            DF EGVRAVL+DKD+NPKW+PA+LE+V   +VEA F P
Sbjct: 304 PDFVEGVRAVLIDKDRNPKWSPATLEDVTPEDVEAFFAP 342

Length = 342
>gnl|CDD|178462 PLN02874, PLN02874, 3-hydroxyisobutyryl-CoA hydrolase-like protein Back     alignment and domain information
>gnl|CDD|178568 PLN02988, PLN02988, 3-hydroxyisobutyryl-CoA hydrolase Back     alignment and domain information
>gnl|CDD|178443 PLN02851, PLN02851, 3-hydroxyisobutyryl-CoA hydrolase-like protein Back     alignment and domain information
>gnl|CDD|177817 PLN02157, PLN02157, 3-hydroxyisobutyryl-CoA hydrolase-like protein Back     alignment and domain information
>gnl|CDD|205939 pfam13766, ECH_C, 2-enoyl-CoA Hydratase C-terminal region Back     alignment and domain information
>gnl|CDD|119339 cd06558, crotonase-like, Crotonase/Enoyl-Coenzyme A (CoA) hydratase superfamily Back     alignment and domain information
>gnl|CDD|223955 COG1024, CaiD, Enoyl-CoA hydratase/carnithine racemase [Lipid metabolism] Back     alignment and domain information
>gnl|CDD|168377 PRK06072, PRK06072, enoyl-CoA hydratase; Provisional Back     alignment and domain information
>gnl|CDD|235852 PRK06688, PRK06688, enoyl-CoA hydratase; Provisional Back     alignment and domain information
>gnl|CDD|131494 TIGR02441, fa_ox_alpha_mit, fatty acid oxidation complex, alpha subunit, mitochondrial Back     alignment and domain information
>gnl|CDD|201191 pfam00378, ECH, Enoyl-CoA hydratase/isomerase family Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 293
KOG1684401 consensus Enoyl-CoA hydratase [Lipid transport and 100.0
PLN02851407 3-hydroxyisobutyryl-CoA hydrolase-like protein 100.0
PLN02988381 3-hydroxyisobutyryl-CoA hydrolase 100.0
PLN02157401 3-hydroxyisobutyryl-CoA hydrolase-like protein 100.0
PLN02874379 3-hydroxyisobutyryl-CoA hydrolase-like protein 100.0
PRK05617342 3-hydroxyisobutyryl-CoA hydrolase; Provisional 100.0
PLN02600251 enoyl-CoA hydratase 100.0
PRK09076258 enoyl-CoA hydratase; Provisional 100.0
PRK05862257 enoyl-CoA hydratase; Provisional 100.0
PRK08150255 enoyl-CoA hydratase; Provisional 100.0
PRK05980260 enoyl-CoA hydratase; Provisional 100.0
PRK07658257 enoyl-CoA hydratase; Provisional 100.0
PRK07657260 enoyl-CoA hydratase; Provisional 100.0
PLN02664275 enoyl-CoA hydratase/delta3,5-delta2,4-dienoyl-CoA 100.0
PRK05809260 3-hydroxybutyryl-CoA dehydratase; Validated 100.0
TIGR02280256 PaaB1 phenylacetate degradation probable enoyl-CoA 100.0
PRK06127269 enoyl-CoA hydratase; Provisional 100.0
PRK06142272 enoyl-CoA hydratase; Provisional 100.0
PRK09674255 enoyl-CoA hydratase-isomerase; Provisional 100.0
PRK08258277 enoyl-CoA hydratase; Provisional 100.0
PRK09245266 enoyl-CoA hydratase; Provisional 100.0
PRK08138261 enoyl-CoA hydratase; Provisional 100.0
PRK08139266 enoyl-CoA hydratase; Validated 100.0
PRK07799263 enoyl-CoA hydratase; Provisional 100.0
PRK08140262 enoyl-CoA hydratase; Provisional 100.0
PRK07659260 enoyl-CoA hydratase; Provisional 100.0
PRK03580261 carnitinyl-CoA dehydratase; Provisional 100.0
PRK05981266 enoyl-CoA hydratase; Provisional 100.0
PRK06494259 enoyl-CoA hydratase; Provisional 100.0
PRK06563255 enoyl-CoA hydratase; Provisional 100.0
PRK07511260 enoyl-CoA hydratase; Provisional 100.0
PRK08252254 enoyl-CoA hydratase; Provisional 100.0
PRK07468262 enoyl-CoA hydratase; Provisional 100.0
PRK05995262 enoyl-CoA hydratase; Provisional 100.0
PRK06688259 enoyl-CoA hydratase; Provisional 100.0
TIGR01929259 menB naphthoate synthase (dihydroxynaphthoic acid 100.0
PRK06210272 enoyl-CoA hydratase; Provisional 100.0
PRK08260296 enoyl-CoA hydratase; Provisional 100.0
PRK11423261 methylmalonyl-CoA decarboxylase; Provisional 100.0
PRK05674265 gamma-carboxygeranoyl-CoA hydratase; Validated 100.0
PRK07327268 enoyl-CoA hydratase; Provisional 100.0
KOG1680290 consensus Enoyl-CoA hydratase [Lipid transport and 100.0
PRK05864276 enoyl-CoA hydratase; Provisional 100.0
PRK06495257 enoyl-CoA hydratase; Provisional 100.0
PRK06143256 enoyl-CoA hydratase; Provisional 100.0
TIGR03189251 dienoyl_CoA_hyt cyclohexa-1,5-dienecarbonyl-CoA hy 100.0
TIGR03210256 badI 2-ketocyclohexanecarboxyl-CoA hydrolase. Memb 100.0
PRK09120275 p-hydroxycinnamoyl CoA hydratase/lyase; Validated 100.0
PRK07509262 enoyl-CoA hydratase; Provisional 100.0
PRK07854243 enoyl-CoA hydratase; Provisional 100.0
PRK07396273 dihydroxynaphthoic acid synthetase; Validated 100.0
PRK07260255 enoyl-CoA hydratase; Provisional 100.0
PRK06144262 enoyl-CoA hydratase; Provisional 100.0
PRK06072248 enoyl-CoA hydratase; Provisional 100.0
PRK07938249 enoyl-CoA hydratase; Provisional 100.0
PF00378245 ECH: Enoyl-CoA hydratase/isomerase family; InterPr 100.0
COG1024257 CaiD Enoyl-CoA hydratase/carnithine racemase [Lipi 100.0
PRK07827260 enoyl-CoA hydratase; Provisional 100.0
PLN02888265 enoyl-CoA hydratase 100.0
PLN02921327 naphthoate synthase 100.0
PRK08321302 naphthoate synthase; Validated 100.0
PRK07112255 polyketide biosynthesis enoyl-CoA hydratase; Valid 100.0
PLN03214278 probable enoyl-CoA hydratase/isomerase; Provisiona 100.0
PRK06023251 enoyl-CoA hydratase; Provisional 100.0
PRK05870249 enoyl-CoA hydratase; Provisional 100.0
PRK08259254 enoyl-CoA hydratase; Provisional 100.0
PRK12478298 enoyl-CoA hydratase; Provisional 100.0
TIGR03222546 benzo_boxC benzoyl-CoA-dihydrodiol lyase. In the p 100.0
PRK08184550 benzoyl-CoA-dihydrodiol lyase; Provisional 99.98
PRK07110249 polyketide biosynthesis enoyl-CoA hydratase; Valid 99.98
PRK06190258 enoyl-CoA hydratase; Provisional 99.97
KOG1679291 consensus Enoyl-CoA hydratase [Lipid transport and 99.97
PRK11730 715 fadB multifunctional fatty acid oxidation complex 99.96
PRK11154 708 fadJ multifunctional fatty acid oxidation complex 99.96
PRK05869222 enoyl-CoA hydratase; Validated 99.96
PRK06213229 enoyl-CoA hydratase; Provisional 99.96
PRK08788287 enoyl-CoA hydratase; Validated 99.96
TIGR02440 699 FadJ fatty oxidation complex, alpha subunit FadJ. 99.96
PRK08290288 enoyl-CoA hydratase; Provisional 99.95
TIGR03200360 dearomat_oah 6-oxocyclohex-1-ene-1-carbonyl-CoA hy 99.95
KOG1681292 consensus Enoyl-CoA isomerase [Lipid transport and 99.95
TIGR02437 714 FadB fatty oxidation complex, alpha subunit FadB. 99.95
PRK08272302 enoyl-CoA hydratase; Provisional 99.94
PF13766118 ECH_C: 2-enoyl-CoA Hydratase C-terminal region; PD 99.94
KOG1682287 consensus Enoyl-CoA isomerase [Lipid transport and 99.93
TIGR02441 737 fa_ox_alpha_mit fatty acid oxidation complex, alph 99.93
PLN02267239 enoyl-CoA hydratase/isomerase family protein 99.92
KOG0016266 consensus Enoyl-CoA hydratase/isomerase [Lipid tra 99.92
COG0447282 MenB Dihydroxynaphthoic acid synthase [Coenzyme me 99.91
cd06558195 crotonase-like Crotonase/Enoyl-Coenzyme A (CoA) hy 99.9
TIGR03222 546 benzo_boxC benzoyl-CoA-dihydrodiol lyase. In the p 99.87
PRK08184 550 benzoyl-CoA-dihydrodiol lyase; Provisional 99.86
cd07020187 Clp_protease_NfeD_1 Nodulation formation efficienc 99.65
cd07014177 S49_SppA Signal peptide peptidase A. Signal peptid 99.49
cd07016160 S14_ClpP_1 Caseinolytic protease (ClpP) is an ATP- 99.33
cd00394161 Clp_protease_like Caseinolytic protease (ClpP) is 98.94
cd07021178 Clp_protease_NfeD_like Nodulation formation effici 98.87
TIGR00705584 SppA_67K signal peptide peptidase SppA, 67K type. 98.87
cd07019211 S49_SppA_1 Signal peptide peptidase A (SppA), a se 98.79
cd07022214 S49_Sppa_36K_type Signal peptide peptidase A (SppA 98.62
TIGR00706207 SppA_dom signal peptide peptidase SppA, 36K type. 98.55
cd07023208 S49_Sppa_N_C Signal peptide peptidase A (SppA), a 98.49
PRK12319256 acetyl-CoA carboxylase subunit alpha; Provisional 98.29
cd07015172 Clp_protease_NfeD Nodulation formation efficiency 98.19
PRK00277200 clpP ATP-dependent Clp protease proteolytic subuni 98.17
TIGR00513316 accA acetyl-CoA carboxylase, carboxyl transferase, 98.01
PRK05724319 acetyl-CoA carboxylase carboxyltransferase subunit 98.0
CHL00198322 accA acetyl-CoA carboxylase carboxyltransferase al 97.98
PLN03230431 acetyl-coenzyme A carboxylase carboxyl transferase 97.97
cd07018222 S49_SppA_67K_type Signal peptide peptidase A (SppA 97.91
cd07013162 S14_ClpP Caseinolytic protease (ClpP) is an ATP-de 97.91
PLN03229 762 acetyl-coenzyme A carboxylase carboxyl transferase 97.89
PRK12553207 ATP-dependent Clp protease proteolytic subunit; Re 97.86
PRK14512197 ATP-dependent Clp protease proteolytic subunit; Pr 97.84
cd07017171 S14_ClpP_2 Caseinolytic protease (ClpP) is an ATP- 97.72
PF00574182 CLP_protease: Clp protease; InterPro: IPR001907 In 97.72
CHL00028200 clpP ATP-dependent Clp protease proteolytic subuni 97.67
PRK14514221 ATP-dependent Clp protease proteolytic subunit; Pr 97.56
TIGR00493191 clpP ATP-dependent Clp protease, proteolytic subun 97.54
TIGR03133274 malonate_beta malonate decarboxylase, beta subunit 97.45
PRK14513201 ATP-dependent Clp protease proteolytic subunit; Pr 97.42
PRK12551196 ATP-dependent Clp protease proteolytic subunit; Re 97.23
TIGR03134238 malonate_gamma malonate decarboxylase, gamma subun 97.09
TIGR00515285 accD acetyl-CoA carboxylase, carboxyl transferase, 96.86
PRK12552222 ATP-dependent Clp protease-like protein; Reviewed 96.84
COG0740200 ClpP Protease subunit of ATP-dependent Clp proteas 96.74
PRK11778330 putative inner membrane peptidase; Provisional 96.66
PRK05654292 acetyl-CoA carboxylase subunit beta; Validated 96.61
PRK07189301 malonate decarboxylase subunit beta; Reviewed 96.56
PRK10949618 protease 4; Provisional 96.5
CHL00174296 accD acetyl-CoA carboxylase beta subunit; Reviewed 96.43
PF01972285 SDH_sah: Serine dehydrogenase proteinase; InterPro 96.13
TIGR01117512 mmdA methylmalonyl-CoA decarboxylase alpha subunit 95.7
KOG1683380 consensus Hydroxyacyl-CoA dehydrogenase/enoyl-CoA 95.66
COG0825317 AccA Acetyl-CoA carboxylase alpha subunit [Lipid m 95.57
PF01039 493 Carboxyl_trans: Carboxyl transferase domain; Inter 94.45
PLN02820 569 3-methylcrotonyl-CoA carboxylase, beta chain 94.43
PF01343154 Peptidase_S49: Peptidase family S49 peptidase clas 94.28
TIGR01117512 mmdA methylmalonyl-CoA decarboxylase alpha subunit 94.2
PLN02157401 3-hydroxyisobutyryl-CoA hydrolase-like protein 94.18
COG0616317 SppA Periplasmic serine proteases (ClpP class) [Po 93.58
COG1030436 NfeD Membrane-bound serine protease (ClpP class) [ 91.88
COG4799526 Acetyl-CoA carboxylase, carboxyltransferase compon 91.67
PLN02820569 3-methylcrotonyl-CoA carboxylase, beta chain 90.89
COG0777294 AccD Acetyl-CoA carboxylase beta subunit [Lipid me 89.39
PF01039493 Carboxyl_trans: Carboxyl transferase domain; Inter 89.08
KOG0840275 consensus ATP-dependent Clp protease, proteolytic 85.94
TIGR00705 584 SppA_67K signal peptide peptidase SppA, 67K type. 83.52
>KOG1684 consensus Enoyl-CoA hydratase [Lipid transport and metabolism] Back     alignment and domain information 
Probab=100.00  E-value=1.8e-57  Score=413.95  Aligned_cols=275  Identities=50%  Similarity=0.826  Sum_probs=257.5

Q ss_pred             HHHHHHHHHHHHHHHhCCCcEEEEECCccchhHHHHhhhcCeEEEeCCeEEeCcccCCCCCCCchHHHHHhcCCCcHHHH
Q 022721            2 IEVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKGPGGGSVG   81 (293)
Q Consensus         2 ~~~~~~~~~l~~~i~~~~kPvIa~vnG~a~GgG~~lal~~D~riate~a~f~~pe~~lGl~p~~g~~~~l~r~~G~~~~a   81 (293)
                      +.||+.+|.+.+.|..+.||.||++||..||||++|+.+..||||||++.|+|||+.||++||+|++++|+|++|  .+|
T Consensus       118 ~~fF~~eYsl~~~igtY~KP~ValmdGITMGgG~GLS~hg~fRVATerT~~AmPEt~IGlfPDVG~Sy~lsrlpg--~lg  195 (401)
T KOG1684|consen  118 KKFFTEEYSLNHLIGTYLKPYVALMDGITMGGGVGLSVHGRFRVATERTVFAMPETGIGLFPDVGASYFLSRLPG--YLG  195 (401)
T ss_pred             HHHHHHHHHHHHHHHHhcCceEEEeeceeecCCcceeecceeEEeeccceecccccccccccCccceeehhhCcc--HHH
Confidence            679999999999999999999999999999999999999999999999999999999999999999999999999  699


Q ss_pred             HHHhhcCCCCCCHHHHHHcCccceeccCCChHHHHHHHHhcccCCCchhHHHHHHHhhcCCCCC-CchhccchhHHHhhh
Q 022721           82 AYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVALLAKYSSDPEG-EAPLKLLLPQITSCF  160 (293)
Q Consensus        82 ~~l~ltG~~l~~a~eA~~~Gl~~~~v~~~~l~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~-~~~l~~~~~~i~~~f  160 (293)
                      .||+|||++++ |.||++.||++|+|++++|....++|. ..+.++|...|++.|.+|.+...+ ...+....+.|+.||
T Consensus       196 ~YLgLTG~rl~-GaD~~~~GlATHyv~S~~l~~Lee~L~-~~l~~dp~~~I~~~l~~y~~~~~~~~~~~~~~~~~i~~~F  273 (401)
T KOG1684|consen  196 LYLGLTGQRLS-GADALRCGLATHYVPSEKLPSLEERLL-KNLNDDPQSVINETLEKYASPAKDESFSLSLKLDVINKCF  273 (401)
T ss_pred             Hhhhhccceec-chHHHHhcchhhccchhhhhHHHHHHh-hhcCCCcHHHHHHHHHHhcccCCCccccchhhHHHHHHhh
Confidence            99999999999 899999999999999999999999998 347788889999999999998554 445677889999999


Q ss_pred             CCCCCHHHHHHHHHhcccccchhHHHHHHHHHHHHhccCcHHHHHHHHHHHHHhhhcCCCccccCCHHHHHHHHHHHHHh
Q 022721          161 SSEKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVASAHGKTDNELSKLSGVMKYEYRVALR  240 (293)
Q Consensus       161 ~~~~t~~~i~~~l~~~~~~~~~~~~~~a~~~~~~i~~~sp~sl~~~k~~l~~~~~~~~~~~~~~~~~~e~l~~e~~~~~~  240 (293)
                      +++ |++||++.|++.+++.+  ..+||+++++.|...||.|+++|.++++.+.         ..++.+++.+|+++..+
T Consensus       274 s~~-tVeeIie~lk~~q~~~~--~~ewak~tlk~L~k~SPtSLkvT~r~i~egs---------~~tl~~~l~~Eyr~s~~  341 (401)
T KOG1684|consen  274 SAN-TVEEIIEALKNYQQSAD--GSEWAKETLKTLKKMSPTSLKVTLRQIREGS---------KQTLDQCLTMEYRLSLR  341 (401)
T ss_pred             ccc-cHHHHHHHHHHHhhhhh--HHHHHHHHHHHHhhcCCchHHHHHHHHHhhh---------HHHHHHHHHHHHHHHHH
Confidence            998 99999999988765333  4899999999999999999999999999887         77999999999999999


Q ss_pred             hCCCCcHHHHHHHHhhCCCCCCCCCCCCccCCCHHHHHhhhcCCCCCCCCCCC
Q 022721          241 SSLRSDFAEGVRAVLVDKDQNPKWNPASLEEVNQSEVEALFEPLGTGVEELKV  293 (293)
Q Consensus       241 ~~~~~d~~egv~a~lv~k~r~P~w~~~~~~~v~~~~v~~~~~~~~~~~~~~~~  293 (293)
                      ++.+.||.||+||.|+||+++|+|++.+++||++++|+.+|.|++. ..|||+
T Consensus       342 ~~~~~DF~EGvRA~LIDKd~~PKW~p~~l~~V~e~~Vdn~F~~~p~-~~eLkl  393 (401)
T KOG1684|consen  342 MLMRGDFCEGVRAVLIDKDQNPKWDPASLADVTEDEVDNYFKPLPS-KSELKL  393 (401)
T ss_pred             HhhccchhhhhhheeecCCcCCCCCCcchhhcCHHHHHHhccCCCC-cccccC
Confidence            9999999999999999999999999999999999999999999776 788874

>PLN02851 3-hydroxyisobutyryl-CoA hydrolase-like protein Back     alignment and domain information
>PLN02988 3-hydroxyisobutyryl-CoA hydrolase Back     alignment and domain information
>PLN02157 3-hydroxyisobutyryl-CoA hydrolase-like protein Back     alignment and domain information
>PLN02874 3-hydroxyisobutyryl-CoA hydrolase-like protein Back     alignment and domain information
>PRK05617 3-hydroxyisobutyryl-CoA hydrolase; Provisional Back     alignment and domain information
>PLN02600 enoyl-CoA hydratase Back     alignment and domain information
>PRK09076 enoyl-CoA hydratase; Provisional Back     alignment and domain information
>PRK05862 enoyl-CoA hydratase; Provisional Back     alignment and domain information
>PRK08150 enoyl-CoA hydratase; Provisional Back     alignment and domain information
>PRK05980 enoyl-CoA hydratase; Provisional Back     alignment and domain information
>PRK07658 enoyl-CoA hydratase; Provisional Back     alignment and domain information
>PRK07657 enoyl-CoA hydratase; Provisional Back     alignment and domain information
>PLN02664 enoyl-CoA hydratase/delta3,5-delta2,4-dienoyl-CoA isomerase Back     alignment and domain information
>PRK05809 3-hydroxybutyryl-CoA dehydratase; Validated Back     alignment and domain information
>TIGR02280 PaaB1 phenylacetate degradation probable enoyl-CoA hydratase paaB Back     alignment and domain information
>PRK06127 enoyl-CoA hydratase; Provisional Back     alignment and domain information
>PRK06142 enoyl-CoA hydratase; Provisional Back     alignment and domain information
>PRK09674 enoyl-CoA hydratase-isomerase; Provisional Back     alignment and domain information
>PRK08258 enoyl-CoA hydratase; Provisional Back     alignment and domain information
>PRK09245 enoyl-CoA hydratase; Provisional Back     alignment and domain information
>PRK08138 enoyl-CoA hydratase; Provisional Back     alignment and domain information
>PRK08139 enoyl-CoA hydratase; Validated Back     alignment and domain information
>PRK07799 enoyl-CoA hydratase; Provisional Back     alignment and domain information
>PRK08140 enoyl-CoA hydratase; Provisional Back     alignment and domain information
>PRK07659 enoyl-CoA hydratase; Provisional Back     alignment and domain information
>PRK03580 carnitinyl-CoA dehydratase; Provisional Back     alignment and domain information
>PRK05981 enoyl-CoA hydratase; Provisional Back     alignment and domain information
>PRK06494 enoyl-CoA hydratase; Provisional Back     alignment and domain information
>PRK06563 enoyl-CoA hydratase; Provisional Back     alignment and domain information
>PRK07511 enoyl-CoA hydratase; Provisional Back     alignment and domain information
>PRK08252 enoyl-CoA hydratase; Provisional Back     alignment and domain information
>PRK07468 enoyl-CoA hydratase; Provisional Back     alignment and domain information
>PRK05995 enoyl-CoA hydratase; Provisional Back     alignment and domain information
>PRK06688 enoyl-CoA hydratase; Provisional Back     alignment and domain information
>TIGR01929 menB naphthoate synthase (dihydroxynaphthoic acid synthetase) Back     alignment and domain information
>PRK06210 enoyl-CoA hydratase; Provisional Back     alignment and domain information
>PRK08260 enoyl-CoA hydratase; Provisional Back     alignment and domain information
>PRK11423 methylmalonyl-CoA decarboxylase; Provisional Back     alignment and domain information
>PRK05674 gamma-carboxygeranoyl-CoA hydratase; Validated Back     alignment and domain information
>PRK07327 enoyl-CoA hydratase; Provisional Back     alignment and domain information
>KOG1680 consensus Enoyl-CoA hydratase [Lipid transport and metabolism] Back     alignment and domain information
>PRK05864 enoyl-CoA hydratase; Provisional Back     alignment and domain information
>PRK06495 enoyl-CoA hydratase; Provisional Back     alignment and domain information
>PRK06143 enoyl-CoA hydratase; Provisional Back     alignment and domain information
>TIGR03189 dienoyl_CoA_hyt cyclohexa-1,5-dienecarbonyl-CoA hydratase Back     alignment and domain information
>TIGR03210 badI 2-ketocyclohexanecarboxyl-CoA hydrolase Back     alignment and domain information
>PRK09120 p-hydroxycinnamoyl CoA hydratase/lyase; Validated Back     alignment and domain information
>PRK07509 enoyl-CoA hydratase; Provisional Back     alignment and domain information
>PRK07854 enoyl-CoA hydratase; Provisional Back     alignment and domain information
>PRK07396 dihydroxynaphthoic acid synthetase; Validated Back     alignment and domain information
>PRK07260 enoyl-CoA hydratase; Provisional Back     alignment and domain information
>PRK06144 enoyl-CoA hydratase; Provisional Back     alignment and domain information
>PRK06072 enoyl-CoA hydratase; Provisional Back     alignment and domain information
>PRK07938 enoyl-CoA hydratase; Provisional Back     alignment and domain information
>PF00378 ECH: Enoyl-CoA hydratase/isomerase family; InterPro: IPR001753 The crotonase superfamily is comprised of mechanistically diverse proteins that share a conserved trimeric quaternary structure (sometimes a hexamer consisting of a dimer of trimers), the core of which consists of 4 turns of a (beta/beta/alpha)n superhelix Back     alignment and domain information
>COG1024 CaiD Enoyl-CoA hydratase/carnithine racemase [Lipid metabolism] Back     alignment and domain information
>PRK07827 enoyl-CoA hydratase; Provisional Back     alignment and domain information
>PLN02888 enoyl-CoA hydratase Back     alignment and domain information
>PLN02921 naphthoate synthase Back     alignment and domain information
>PRK08321 naphthoate synthase; Validated Back     alignment and domain information
>PRK07112 polyketide biosynthesis enoyl-CoA hydratase; Validated Back     alignment and domain information
>PLN03214 probable enoyl-CoA hydratase/isomerase; Provisional Back     alignment and domain information
>PRK06023 enoyl-CoA hydratase; Provisional Back     alignment and domain information
>PRK05870 enoyl-CoA hydratase; Provisional Back     alignment and domain information
>PRK08259 enoyl-CoA hydratase; Provisional Back     alignment and domain information
>PRK12478 enoyl-CoA hydratase; Provisional Back     alignment and domain information
>TIGR03222 benzo_boxC benzoyl-CoA-dihydrodiol lyase Back     alignment and domain information
>PRK08184 benzoyl-CoA-dihydrodiol lyase; Provisional Back     alignment and domain information
>PRK07110 polyketide biosynthesis enoyl-CoA hydratase; Validated Back     alignment and domain information
>PRK06190 enoyl-CoA hydratase; Provisional Back     alignment and domain information
>KOG1679 consensus Enoyl-CoA hydratase [Lipid transport and metabolism] Back     alignment and domain information
>PRK11730 fadB multifunctional fatty acid oxidation complex subunit alpha; Reviewed Back     alignment and domain information
>PRK11154 fadJ multifunctional fatty acid oxidation complex subunit alpha; Reviewed Back     alignment and domain information
>PRK05869 enoyl-CoA hydratase; Validated Back     alignment and domain information
>PRK06213 enoyl-CoA hydratase; Provisional Back     alignment and domain information
>PRK08788 enoyl-CoA hydratase; Validated Back     alignment and domain information
>TIGR02440 FadJ fatty oxidation complex, alpha subunit FadJ Back     alignment and domain information
>PRK08290 enoyl-CoA hydratase; Provisional Back     alignment and domain information
>TIGR03200 dearomat_oah 6-oxocyclohex-1-ene-1-carbonyl-CoA hydrolase Back     alignment and domain information
>KOG1681 consensus Enoyl-CoA isomerase [Lipid transport and metabolism] Back     alignment and domain information
>TIGR02437 FadB fatty oxidation complex, alpha subunit FadB Back     alignment and domain information
>PRK08272 enoyl-CoA hydratase; Provisional Back     alignment and domain information
>PF13766 ECH_C: 2-enoyl-CoA Hydratase C-terminal region; PDB: 3JU1_A 3BPT_A Back     alignment and domain information
>KOG1682 consensus Enoyl-CoA isomerase [Lipid transport and metabolism] Back     alignment and domain information
>TIGR02441 fa_ox_alpha_mit fatty acid oxidation complex, alpha subunit, mitochondrial Back     alignment and domain information
>PLN02267 enoyl-CoA hydratase/isomerase family protein Back     alignment and domain information
>KOG0016 consensus Enoyl-CoA hydratase/isomerase [Lipid transport and metabolism] Back     alignment and domain information
>COG0447 MenB Dihydroxynaphthoic acid synthase [Coenzyme metabolism] Back     alignment and domain information
>cd06558 crotonase-like Crotonase/Enoyl-Coenzyme A (CoA) hydratase superfamily Back     alignment and domain information
>TIGR03222 benzo_boxC benzoyl-CoA-dihydrodiol lyase Back     alignment and domain information
>PRK08184 benzoyl-CoA-dihydrodiol lyase; Provisional Back     alignment and domain information
>cd07020 Clp_protease_NfeD_1 Nodulation formation efficiency D (NfeD) is a membrane-bound ClpP-class protease Back     alignment and domain information
>cd07014 S49_SppA Signal peptide peptidase A Back     alignment and domain information
>cd07016 S14_ClpP_1 Caseinolytic protease (ClpP) is an ATP-dependent, highly conserved serine protease Back     alignment and domain information
>cd00394 Clp_protease_like Caseinolytic protease (ClpP) is an ATP-dependent protease Back     alignment and domain information
>cd07021 Clp_protease_NfeD_like Nodulation formation efficiency D (NfeD) is a membrane-bound ClpP-class protease Back     alignment and domain information
>TIGR00705 SppA_67K signal peptide peptidase SppA, 67K type Back     alignment and domain information
>cd07019 S49_SppA_1 Signal peptide peptidase A (SppA), a serine protease, has catalytic Ser-Lys dyad Back     alignment and domain information
>cd07022 S49_Sppa_36K_type Signal peptide peptidase A (SppA) 36K type, a serine protease, has catalytic Ser-Lys dyad Back     alignment and domain information
>TIGR00706 SppA_dom signal peptide peptidase SppA, 36K type Back     alignment and domain information
>cd07023 S49_Sppa_N_C Signal peptide peptidase A (SppA), a serine protease, has catalytic Ser-Lys dyad Back     alignment and domain information
>PRK12319 acetyl-CoA carboxylase subunit alpha; Provisional Back     alignment and domain information
>cd07015 Clp_protease_NfeD Nodulation formation efficiency D (NfeD) is a membrane-bound ClpP-class protease Back     alignment and domain information
>PRK00277 clpP ATP-dependent Clp protease proteolytic subunit; Reviewed Back     alignment and domain information
>TIGR00513 accA acetyl-CoA carboxylase, carboxyl transferase, alpha subunit Back     alignment and domain information
>PRK05724 acetyl-CoA carboxylase carboxyltransferase subunit alpha; Validated Back     alignment and domain information
>CHL00198 accA acetyl-CoA carboxylase carboxyltransferase alpha subunit; Provisional Back     alignment and domain information
>PLN03230 acetyl-coenzyme A carboxylase carboxyl transferase; Provisional Back     alignment and domain information
>cd07018 S49_SppA_67K_type Signal peptide peptidase A (SppA) 67K type, a serine protease, has catalytic Ser-Lys dyad Back     alignment and domain information
>cd07013 S14_ClpP Caseinolytic protease (ClpP) is an ATP-dependent, highly conserved serine protease Back     alignment and domain information
>PLN03229 acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha; Provisional Back     alignment and domain information
>PRK12553 ATP-dependent Clp protease proteolytic subunit; Reviewed Back     alignment and domain information
>PRK14512 ATP-dependent Clp protease proteolytic subunit; Provisional Back     alignment and domain information
>cd07017 S14_ClpP_2 Caseinolytic protease (ClpP) is an ATP-dependent, highly conserved serine protease Back     alignment and domain information
>PF00574 CLP_protease: Clp protease; InterPro: IPR001907 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families Back     alignment and domain information
>CHL00028 clpP ATP-dependent Clp protease proteolytic subunit Back     alignment and domain information
>PRK14514 ATP-dependent Clp protease proteolytic subunit; Provisional Back     alignment and domain information
>TIGR00493 clpP ATP-dependent Clp protease, proteolytic subunit ClpP Back     alignment and domain information
>TIGR03133 malonate_beta malonate decarboxylase, beta subunit Back     alignment and domain information
>PRK14513 ATP-dependent Clp protease proteolytic subunit; Provisional Back     alignment and domain information
>PRK12551 ATP-dependent Clp protease proteolytic subunit; Reviewed Back     alignment and domain information
>TIGR03134 malonate_gamma malonate decarboxylase, gamma subunit Back     alignment and domain information
>TIGR00515 accD acetyl-CoA carboxylase, carboxyl transferase, beta subunit Back     alignment and domain information
>PRK12552 ATP-dependent Clp protease-like protein; Reviewed Back     alignment and domain information
>COG0740 ClpP Protease subunit of ATP-dependent Clp proteases [Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion] Back     alignment and domain information
>PRK11778 putative inner membrane peptidase; Provisional Back     alignment and domain information
>PRK05654 acetyl-CoA carboxylase subunit beta; Validated Back     alignment and domain information
>PRK07189 malonate decarboxylase subunit beta; Reviewed Back     alignment and domain information
>PRK10949 protease 4; Provisional Back     alignment and domain information
>CHL00174 accD acetyl-CoA carboxylase beta subunit; Reviewed Back     alignment and domain information
>PF01972 SDH_sah: Serine dehydrogenase proteinase; InterPro: IPR002825 This family of archaebacterial proteins, formerly known as DUF114, has been found to be a serine dehydrogenase proteinase distantly related to ClpP proteinases that belong to the serine proteinase superfamily Back     alignment and domain information
>TIGR01117 mmdA methylmalonyl-CoA decarboxylase alpha subunit Back     alignment and domain information
>KOG1683 consensus Hydroxyacyl-CoA dehydrogenase/enoyl-CoA hydratase [Lipid transport and metabolism] Back     alignment and domain information
>COG0825 AccA Acetyl-CoA carboxylase alpha subunit [Lipid metabolism] Back     alignment and domain information
>PF01039 Carboxyl_trans: Carboxyl transferase domain; InterPro: IPR000022 Members in this domain include biotin dependent carboxylases [, ] Back     alignment and domain information
>PLN02820 3-methylcrotonyl-CoA carboxylase, beta chain Back     alignment and domain information
>PF01343 Peptidase_S49: Peptidase family S49 peptidase classification Back     alignment and domain information
>TIGR01117 mmdA methylmalonyl-CoA decarboxylase alpha subunit Back     alignment and domain information
>PLN02157 3-hydroxyisobutyryl-CoA hydrolase-like protein Back     alignment and domain information
>COG0616 SppA Periplasmic serine proteases (ClpP class) [Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion] Back     alignment and domain information
>COG1030 NfeD Membrane-bound serine protease (ClpP class) [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>COG4799 Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) [Lipid metabolism] Back     alignment and domain information
>PLN02820 3-methylcrotonyl-CoA carboxylase, beta chain Back     alignment and domain information
>COG0777 AccD Acetyl-CoA carboxylase beta subunit [Lipid metabolism] Back     alignment and domain information
>PF01039 Carboxyl_trans: Carboxyl transferase domain; InterPro: IPR000022 Members in this domain include biotin dependent carboxylases [, ] Back     alignment and domain information
>KOG0840 consensus ATP-dependent Clp protease, proteolytic subunit [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>TIGR00705 SppA_67K signal peptide peptidase SppA, 67K type Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query293
3bpt_A363 Crystal Structure Of Human Beta-Hydroxyisobutyryl-C 4e-42
4hdt_A353 Crystal Structure Of A Carnitinyl-Coa Dehydratase F 5e-36
4j2u_A365 Crystal Structure Of An Enoyl-coa Hydratase From Rh 1e-34
3ju1_A407 Crystal Structure Of Enoyl-Coa HydrataseISOMERASE F 2e-21
3qxz_A265 Crystal Structure Of A Probable Enoyl-Coa Hydratase 2e-04
>pdb|3BPT|A Chain A, Crystal Structure Of Human Beta-Hydroxyisobutyryl-Coa Hydrolase In Complex With Quercetin Length = 363 Back     alignment and structure 
Iteration: 1

 Score =  168 bits (425), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 105/286 (36%), Positives = 159/286 (55%), Gaps = 26/286 (9%)
Query: 5   FTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPD 64
           F  EY L   +   +KPY++L+ G+T G G+G+S HG++R+ TEK L A PE  IGLFPD
Sbjct: 88  FREEYXLNNAVGSCQKPYVALIHGITXGGGVGLSVHGQFRVATEKCLFAXPETAIGLFPD 147
Query: 65  VGFSYIAAKGPGGGSVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTF 124
           VG  Y   +    G +G +L +TG R+    D   AG+ T +V S  L  L+E LLA+  
Sbjct: 148 VGGGYFLPRLQ--GKLGYFLALTGFRLKG-RDVYRAGIATHFVDSEKLAXLEEDLLAL-- 202
Query: 125 SEDPHQDIVALLAKYSSDPEGEAPLKLLLPQ----ITSCFSSEKSVRQIIEELKKHQSSA 180
                ++I ++L  Y ++ + +     +L +    I SCFS+  +V +IIE L++  SS 
Sbjct: 203 KSPSKENIASVLENYHTESKIDRDKSFILEEHXDKINSCFSA-NTVEEIIENLQQDGSS- 260
Query: 181 ETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVASAHGKTDNELSKLSGVMKYEYRVALR 240
                 +A E L+ + K +P SL +T +   + +S           L  V+  EYR++  
Sbjct: 261 ------FALEQLKVINKXSPTSLKITLRQLXEGSS---------KTLQEVLTXEYRLSQA 305
Query: 241 SSLRSDFAEGVRAVLVDKDQNPKWNPASLEEVNQSEVEALFEPLGT 286
                DF EGVRAVL+DKDQ+PKW PA L+EV + ++   F+ LG+
Sbjct: 306 CXRGHDFHEGVRAVLIDKDQSPKWKPADLKEVTEEDLNNHFKSLGS 351
>pdb|4HDT|A Chain A, Crystal Structure Of A Carnitinyl-Coa Dehydratase From Mycobacterium Thermoresistibile Length = 353 Back     alignment and structure
>pdb|4J2U|A Chain A, Crystal Structure Of An Enoyl-coa Hydratase From Rhodobacter Sphaeroides 2.4.1 Length = 365 Back     alignment and structure
>pdb|3JU1|A Chain A, Crystal Structure Of Enoyl-Coa HydrataseISOMERASE FAMILY PROTEIN Length = 407 Back     alignment and structure
>pdb|3QXZ|A Chain A, Crystal Structure Of A Probable Enoyl-Coa HydrataseISOMERASE FROM Mycobacterium Abscessus Length = 265 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query293
3bpt_A363 3-hydroxyisobutyryl-COA hydrolase; coenzyme A, bet 1e-106
3ju1_A407 Enoyl-COA hydratase/isomerase family protein; alph 1e-105
2f6q_A280 Peroxisomal 3,2-trans-enoyl-COA isomerase; peroxis 8e-06
3p5m_A255 Enoyl-COA hydratase/isomerase; seattle structural 6e-05
3gow_A254 PAAG, probable enoyl-COA hydratase; the spiral fol 9e-05
2wtb_A 725 MFP2, fatty acid multifunctional protein (ATMFP2); 9e-05
1pjh_A280 Enoyl-COA isomerase; ECI1P; beta-BETA-alpha spiral 2e-04
3qmj_A256 Enoyl-COA hydratase, ECHA8_6; ssgcid, NIH, niaid, 3e-04
1wdk_A 715 Fatty oxidation complex alpha subunit; alpha2BETA2 3e-04
2fbm_A291 Y chromosome chromodomain protein 1, telomeric IS; 3e-04
3r6h_A233 Enoyl-COA hydratase, ECHA3; ssgcid, mycobacerium m 4e-04
2ej5_A257 Enoyl-COA hydratase subunit II; structural genomic 5e-04
>3bpt_A 3-hydroxyisobutyryl-COA hydrolase; coenzyme A, beta-hydroxyisobutyryl acid, querceti structural genomics consortium, SGC; HET: QUE; 1.50A {Homo sapiens} Length = 363 Back     alignment and structure
 Score =  312 bits (802), Expect = e-106
 Identities = 106/293 (36%), Positives = 160/293 (54%), Gaps = 26/293 (8%)

Query: 3   EVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLF 62
             F  EY L   +   +KPY++L+ G+TMG G+G+S HG++R+ TEK L AMPE  IGLF
Sbjct: 86  VFFREEYMLNNAVGSCQKPYVALIHGITMGGGVGLSVHGQFRVATEKCLFAMPETAIGLF 145

Query: 63  PDVGFSYIAAKGPGGGSVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAV 122
           PDVG  Y   +  G   +G +L +TG R+    D   AG+ T +V S  L  L+E LLA+
Sbjct: 146 PDVGGGYFLPRLQGK--LGYFLALTGFRLK-GRDVYRAGIATHFVDSEKLAMLEEDLLAL 202

Query: 123 TFSEDPHQDIVALLAKYSSDP----EGEAPLKLLLPQITSCFSSEKSVRQIIEELKKHQS 178
                  ++I ++L  Y ++     +    L+  + +I SCFS+  +V +IIE L++  S
Sbjct: 203 KSPS--KENIASVLENYHTESKIDRDKSFILEEHMDKINSCFSAN-TVEEIIENLQQDGS 259

Query: 179 SAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVASAHGKTDNELSKLSGVMKYEYRVA 238
                   +A E L+ + K +P SL +T +         G +      L  V+  EYR++
Sbjct: 260 -------SFALEQLKVINKMSPTSLKITLRQLM-----EGSSKT----LQEVLTMEYRLS 303

Query: 239 LRSSLRSDFAEGVRAVLVDKDQNPKWNPASLEEVNQSEVEALFEPLGTGVEEL 291
                  DF EGVRAVL+DKDQ+PKW PA L+EV + ++   F+ LG+   + 
Sbjct: 304 QACMRGHDFHEGVRAVLIDKDQSPKWKPADLKEVTEEDLNNHFKSLGSSDLKF 356
>3ju1_A Enoyl-COA hydratase/isomerase family protein; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; HET: MSE; 2.30A {Shewanella oneidensis} Length = 407 Back     alignment and structure
>2f6q_A Peroxisomal 3,2-trans-enoyl-COA isomerase; peroxisomes, fatty acid metabolism, STR genomics, structural genomics consortium, SGC; 1.95A {Homo sapiens} SCOP: c.14.1.3 Length = 280 Back     alignment and structure
>3p5m_A Enoyl-COA hydratase/isomerase; seattle structural genomics center for infectious disease, S coenzyme A, tuberculosis; 2.05A {Mycobacterium avium} Length = 255 Back     alignment and structure
>2wtb_A MFP2, fatty acid multifunctional protein (ATMFP2); oxidoreductase, peroxisomes, beta-oxidation, fatty acid oxidation; 2.50A {Arabidopsis thaliana} Length = 725 Back     alignment and structure
>1pjh_A Enoyl-COA isomerase; ECI1P; beta-BETA-alpha spiral fold, inter-trimer contacts; 2.10A {Saccharomyces cerevisiae} SCOP: c.14.1.3 PDB: 1hno_A 1k39_A* 1hnu_A Length = 280 Back     alignment and structure
>3qmj_A Enoyl-COA hydratase, ECHA8_6; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.20A {Mycobacterium marinum} Length = 256 Back     alignment and structure
>1wdk_A Fatty oxidation complex alpha subunit; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: a.100.1.3 a.100.1.3 c.2.1.6 c.14.1.3 PDB: 1wdl_A* 1wdm_A* 2d3t_A* Length = 715 Back     alignment and structure
>2fbm_A Y chromosome chromodomain protein 1, telomeric IS; acetyltransferase, structural genomics, structural genomics consortium, SGC, unknown function; 2.28A {Homo sapiens} SCOP: c.14.1.3 Length = 291 Back     alignment and structure
>3r6h_A Enoyl-COA hydratase, ECHA3; ssgcid, mycobacerium marinum, structura genomics, seattle structural genomics center for infectious lyase; 1.75A {Mycobacterium marinum M} Length = 233 Back     alignment and structure
>2ej5_A Enoyl-COA hydratase subunit II; structural genomics, GK2038, NPPSFA, national project on prote structural and functional analyses; 2.00A {Geobacillus kaustophilus} Length = 257 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query293
4hdt_A353 3-hydroxyisobutyryl-COA hydrolase; ssgcid, carniti 100.0
3ju1_A407 Enoyl-COA hydratase/isomerase family protein; alph 100.0
3bpt_A363 3-hydroxyisobutyryl-COA hydrolase; coenzyme A, bet 100.0
3hrx_A254 Probable enoyl-COA hydratase; the spiral fold, the 100.0
4fzw_C274 1,2-epoxyphenylacetyl-COA isomerase; structural ge 100.0
4fzw_A258 2,3-dehydroadipyl-COA hydratase; structural genomi 100.0
3kqf_A265 Enoyl-COA hydratase/isomerase family protein; IDP0 100.0
3gow_A254 PAAG, probable enoyl-COA hydratase; the spiral fol 100.0
3p5m_A255 Enoyl-COA hydratase/isomerase; seattle structural 100.0
3g64_A279 Putative enoyl-COA hydratase; alpha-beta structure 100.0
3sll_A290 Probable enoyl-COA hydratase/isomerase; structural 100.0
3pea_A261 Enoyl-COA hydratase/isomerase family protein; stru 100.0
1nzy_A269 Dehalogenase, 4-chlorobenzoyl coenzyme A dehalogen 100.0
3h81_A278 Enoyl-COA hydratase ECHA8; niaid, decode, infectio 100.0
3hin_A275 Putative 3-hydroxybutyryl-COA dehydratase; structu 100.0
3rsi_A265 Putative enoyl-COA hydratase/isomerase; structural 100.0
3moy_A263 Probable enoyl-COA hydratase; ssgcid, seattle stru 100.0
1dci_A275 Dienoyl-COA isomerase; lyase; 1.50A {Rattus norveg 100.0
1hzd_A272 AUH, AU-binding protein/enoyl-COA hydratase; RNA-b 100.0
2ppy_A265 Enoyl-COA hydratase; beta-oxidation, fatty acid me 100.0
3myb_A286 Enoyl-COA hydratase; ssgcid, struct genomics, seat 100.0
2pbp_A258 Enoyl-COA hydratase subunit I; B-oxidation, struct 100.0
3trr_A256 Probable enoyl-COA hydratase/isomerase; ssgcid, st 100.0
2ej5_A257 Enoyl-COA hydratase subunit II; structural genomic 100.0
2vx2_A287 Enoyl-COA hydratase domain-containing protein 3; i 100.0
3i47_A268 Enoyl COA hydratase/isomerase (crotonase); structu 100.0
3r9t_A267 ECHA1_1; ssgcid, seattle structural genomics cente 100.0
2fbm_A291 Y chromosome chromodomain protein 1, telomeric IS; 100.0
3qk8_A272 Enoyl-COA hydratase ECHA15; ssgcid, NIH, niaid, SB 100.0
1wz8_A264 Enoyl-COA hydratase; lyase, crotonase, hexamer, st 100.0
4f47_A278 Enoyl-COA hydratase ECHA19; ssgcid, seattle struct 100.0
2gtr_A261 CDY-like, chromodomain Y-like protein; structural 100.0
3oc7_A267 Enoyl-COA hydratase; seattle structural genomics c 100.0
3swx_A265 Probable enoyl-COA hydratase/isomerase; structural 100.0
3tlf_A274 Enoyl-COA hydratase/isomerase; structural genomics 100.0
3fdu_A266 Putative enoyl-COA hydratase/isomerase; structural 100.0
1ef8_A261 Methylmalonyl COA decarboxylase; lyase; 1.85A {Esc 100.0
3qre_A298 Enoyl-COA hydratase, ECHA12_1; structural genomics 100.0
1mj3_A260 Enoyl-COA hydratase, mitochondrial; homohexamer, l 100.0
1uiy_A253 Enoyl-COA hydratase; lyase, beta-oxidation, croton 100.0
3qxi_A265 Enoyl-COA hydratase ECHA1; structural genomics, se 100.0
3qxz_A265 Enoyl-COA hydratase/isomerase; structural genomics 100.0
3lke_A263 Enoyl-COA hydratase; nysgrc, target 112 structural 100.0
3hp0_A267 Putative polyketide biosynthesis enoyl-COA hydrata 100.0
2uzf_A273 Naphthoate synthase; lyase, menaquinone biosynthes 100.0
3r9q_A262 Enoyl-COA hydratase/isomerase; ssgcid, lyase,isome 100.0
2j5i_A276 P-hydroxycinnamoyl COA hydratase/lyase; vanillin, 100.0
4eml_A275 Naphthoate synthase; 1,4-dihydroxy-2-naphthoyl-coe 100.0
3he2_A264 Enoyl-COA hydratase ECHA6; fatty acid metabolism, 100.0
2f6q_A280 Peroxisomal 3,2-trans-enoyl-COA isomerase; peroxis 100.0
3t8b_A334 1,4-dihydroxy-2-naphthoyl-COA synthase; crotonase 100.0
3t89_A289 1,4-dihydroxy-2-naphthoyl-COA synthase; crotonase 100.0
3gkb_A287 Putative enoyl-COA hydratase; structural genomics, 100.0
3rrv_A276 Enoyl-COA hydratase/isomerase; structural genomics 100.0
3qmj_A256 Enoyl-COA hydratase, ECHA8_6; ssgcid, NIH, niaid, 100.0
1sg4_A260 3,2-trans-enoyl-COA isomerase, mitochondrial; crot 100.0
2a7k_A250 CARB; crotonase, antibiotic, beta-lactam, biosynth 100.0
3l3s_A263 Enoyl-COA hydratase/isomerase family protein; crot 100.0
3h0u_A289 Putative enoyl-COA hydratase; structural genomics, 100.0
4di1_A277 Enoyl-COA hydratase ECHA17; structural genomics, s 100.0
3pe8_A256 Enoyl-COA hydratase; emerald biostructures, struct 100.0
3lao_A258 Enoyl-COA hydratase/isomerase; alpha-beta sandwich 100.0
3isa_A254 Putative enoyl-COA hydratase/isomerase; structural 100.0
2q35_A243 CURF; crotonase, lyase; 1.65A {Lyngbya majuscula} 100.0
3m6n_A305 RPFF protein; enoyl-COA hydratase, lyase; 1.80A {X 100.0
1pjh_A280 Enoyl-COA isomerase; ECI1P; beta-BETA-alpha spiral 99.97
3ot6_A232 Enoyl-COA hydratase/isomerase family protein; stru 99.97
3r6h_A233 Enoyl-COA hydratase, ECHA3; ssgcid, mycobacerium m 99.97
2j5g_A263 ALR4455 protein; enzyme evolution, C-C bond hydrol 99.97
3njd_A333 Enoyl-COA hydratase; ssgcid, mycobacerium smegmati 99.97
1szo_A257 6-oxocamphor hydrolase; enzyme-product complex; HE 99.96
2wtb_A 725 MFP2, fatty acid multifunctional protein (ATMFP2); 99.96
1wdk_A 715 Fatty oxidation complex alpha subunit; alpha2BETA2 99.96
3zwc_A 742 Peroxisomal bifunctional enzyme; beta oxidation pa 99.96
2np9_A440 DPGC; protein inhibitor complex, oxidoreductase; H 99.96
3t3w_A279 Enoyl-COA hydratase; ssgcid, structural genomics, 99.96
2w3p_A 556 Benzoyl-COA-dihydrodiol lyase; BOXC, crotonase, ri 99.92
3viv_A230 441AA long hypothetical NFED protein; protein-pept 99.43
3rst_A240 Signal peptide peptidase SPPA; alpha/beta protein 99.42
3bf0_A593 Protease 4; bacterial, hydrolase, inner membrane, 99.41
1y7o_A218 ATP-dependent CLP protease proteolytic subunit; hy 99.28
2f9y_A339 Acetyl-COA carboxylase, carboxyltransferase alpha; 99.27
2f9i_A327 Acetyl-coenzyme A carboxylase carboxyl transferase 99.25
2f9y_B304 Acetyl-coenzyme A carboxylase carboxyl transferas 98.91
2cby_A208 ATP-dependent CLP protease proteolytic subunit 1; 98.42
3qwd_A203 ATP-dependent CLP protease proteolytic subunit; ca 97.99
2f6i_A215 ATP-dependent CLP protease, putative; structural g 97.97
1yg6_A193 ATP-dependent CLP protease proteolytic subunit; en 97.89
1tg6_A277 Putative ATP-dependent CLP protease proteolytic S; 97.79
3p2l_A201 ATP-dependent CLP protease proteolytic subunit; st 97.61
4gm2_A205 ATP-dependent CLP protease proteolytic subunit; st 97.53
1pix_A 587 Glutaconyl-COA decarboxylase A subunit; biotin-dep 97.39
2f9i_B285 Acetyl-coenzyme A carboxylase carboxyl transferase 97.08
3iav_A 530 Propionyl-COA carboxylase complex B subunit; accas 96.79
3n6r_B531 Propionyl-COA carboxylase, beta subunit; protein c 96.37
1x0u_A 522 Hypothetical methylmalonyl-COA decarboxylase ALPH; 96.34
3bf0_A 593 Protease 4; bacterial, hydrolase, inner membrane, 96.3
1x0u_A522 Hypothetical methylmalonyl-COA decarboxylase ALPH; 96.3
3u9r_B555 MCC beta, methylcrotonyl-COA carboxylase, beta-sub 96.21
1on3_A523 Methylmalonyl-COA carboxyltransferase 12S subunit; 95.94
2bzr_A548 Propionyl-COA carboxylase beta chain 5; fatty acid 95.77
1vrg_A527 Propionyl-COA carboxylase, beta subunit; TM0716, s 95.1
2w3p_A556 Benzoyl-COA-dihydrodiol lyase; BOXC, crotonase, ri 95.0
2bzr_A548 Propionyl-COA carboxylase beta chain 5; fatty acid 94.64
1on3_A523 Methylmalonyl-COA carboxyltransferase 12S subunit; 94.41
1pix_A587 Glutaconyl-COA decarboxylase A subunit; biotin-dep 94.34
3gf3_A 588 Glutaconyl-COA decarboxylase subunit A; sodium ION 94.18
3n6r_B531 Propionyl-COA carboxylase, beta subunit; protein c 93.89
3iav_A530 Propionyl-COA carboxylase complex B subunit; accas 93.82
3k8x_A 758 Acetyl-COA carboxylase; transferase, carboxyltrans 92.71
2x24_A 793 Acetyl-COA carboxylase; fatty acid biosynthesis, l 91.33
1vrg_A527 Propionyl-COA carboxylase, beta subunit; TM0716, s 91.22
3u9r_B555 MCC beta, methylcrotonyl-COA carboxylase, beta-sub 90.65
3gf3_A588 Glutaconyl-COA decarboxylase subunit A; sodium ION 88.4
>4hdt_A 3-hydroxyisobutyryl-COA hydrolase; ssgcid, carnitinyl-COA dehydratase, enoyl-COA hydratase/ISOM mycobacterium thermoresistibIle; 1.60A {Mycobacterium thermoresistibile} Back     alignment and structure
Probab=100.00  E-value=4.2e-53  Score=397.92  Aligned_cols=257  Identities=39%  Similarity=0.683  Sum_probs=231.6

Q ss_pred             HHHHHHHHHHHHHHHhCCCcEEEEECCccchhHHHHhhhcCeEEEeCCeEEeCcccCCCCCCCchHHHHHhcCCCcHHHH
Q 022721            2 IEVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKGPGGGSVG   81 (293)
Q Consensus         2 ~~~~~~~~~l~~~i~~~~kPvIa~vnG~a~GgG~~lal~~D~riate~a~f~~pe~~lGl~p~~g~~~~l~r~~G~~~~a   81 (293)
                      ..|+...+.++.+|.++|||+||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|+|++| . ++
T Consensus        88 ~~~~~~~~~~~~~i~~~~kPvIAav~G~a~GgG~~lal~cD~ria~~~a~f~~pe~~iGl~p~~g~~~~l~rl~g-~-~a  165 (353)
T 4hdt_A           88 RRFWFDEYRLNAHIGRYPKPYVSIMDGIVMGGGVGVGAHGNVRVVTDTTKMAMPEVGIGFIPDVGGTYLLSRAPG-K-LG  165 (353)
T ss_dssp             HHHHHHHHHHHHHHHHCSSCEEEEECBEEETHHHHHHTTSSEEEECTTCEEECCGGGGTCCCCTTHHHHHHTSST-T-HH
T ss_pred             HHHHHHHHHHHHHHHHCCCCEEEEeECceeecCccccCCcCeeccchhccccCcccccccCCCccceehhhhhhh-H-HH
Confidence            357788899999999999999999999999999999999999999999999999999999999999999999999 5 99


Q ss_pred             HHHhhcCCCCCCHHHHHHcCccceeccCCChHHHHHHHHhcccCCCchhHHHHHHHhhcCCCCCCchhccchhHHHhhhC
Q 022721           82 AYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVALLAKYSSDPEGEAPLKLLLPQITSCFS  161 (293)
Q Consensus        82 ~~l~ltG~~l~~a~eA~~~Gl~~~~v~~~~l~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~i~~~f~  161 (293)
                      ++|+|||++++ |+||+++||||++||+++|++.+.+++..        .+...+..|... .+...+...++.|++||.
T Consensus       166 ~~l~ltG~~i~-A~eA~~~GLv~~vv~~~~l~~~a~~la~~--------~~~~~l~~~~~~-~~~~~l~~~~~~i~~~f~  235 (353)
T 4hdt_A          166 LHAALTGAPFS-GADAIVMGFADHYVPHDKIDEFTRAVIAD--------GVDAALAAHAQE-PPASPLAEQRSWIDECYT  235 (353)
T ss_dssp             HHHHHHCCCBC-HHHHHHHTSCSEECCGGGHHHHHHHHHHH--------CHHHHHHHHCBC-CCCCHHHHTHHHHHHHTT
T ss_pred             HHHHhcCCCCC-HHHHHHcCCCcEEeCHHHHHHHHHHHHHh--------chhHHHHHhccc-CCccchHHHHHHHHHHhC
Confidence            99999999999 99999999999999999999999887663        244556666543 345578889999999999


Q ss_pred             CCCCHHHHHHHHHhcccccchhHHHHHHHHHHHHhccCcHHHHHHHHHHHHHhhhcCCCccccCCHHHHHHHHHHHHHhh
Q 022721          162 SEKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVASAHGKTDNELSKLSGVMKYEYRVALRS  241 (293)
Q Consensus       162 ~~~t~~~i~~~l~~~~~~~~~~~~~~a~~~~~~i~~~sp~sl~~~k~~l~~~~~~~~~~~~~~~~~~e~l~~e~~~~~~~  241 (293)
                      .+ ++++|++.|+...       ..|+.++++.|+++||.|++.+|++++++.        ...+++++++.|++++..+
T Consensus       236 ~~-~~~~i~~~L~~~~-------~~~a~~~a~~la~~sP~a~~~~k~~l~~~~--------~~~sl~e~l~~E~~~~~~~  299 (353)
T 4hdt_A          236 GD-TVADIIAALRAHD-------APAAGEAADLIATRSPIALSVTLESVRRAA--------KLQSLEDTLRQEYRVSCAS  299 (353)
T ss_dssp             CS-SHHHHHHHHHHHC-------SHHHHHHHHHHTTSCHHHHHHHHHHHHHHT--------TCCCHHHHHHHHHHHHHHH
T ss_pred             CC-CHHHHHHHHHhcc-------cHHHHHHHHHHHhcCcHHHHHHHHHHHHhc--------cCCCHHHHHHHHHHHHHHH
Confidence            98 9999999998875       579999999999999999999999999987        2458999999999999999


Q ss_pred             CCCCcHHHHHHHHhhCCCCCCCCCCCCccCCCHHHHHhhhcCCCC
Q 022721          242 SLRSDFAEGVRAVLVDKDQNPKWNPASLEEVNQSEVEALFEPLGT  286 (293)
Q Consensus       242 ~~~~d~~egv~a~lv~k~r~P~w~~~~~~~v~~~~v~~~~~~~~~  286 (293)
                      +.++||+|||+|||++|.|+|+|++++++||++++|+.||+|+++
T Consensus       300 ~~s~D~~EGvrAfl~dekR~P~w~p~~l~~V~~~~v~~~f~p~~~  344 (353)
T 4hdt_A          300 LKSHDLVEGIRAQLVDKDRNPKWRPATLAEVTEADVEAYFAPVDP  344 (353)
T ss_dssp             TTCHHHHHHHHHHHC----CCCCSSCSGGGCCHHHHHGGGCCCSS
T ss_pred             hCCchHHHHHhhhhhCcCCCCCCCCCChhhCCHHHHHHHcCCCCC
Confidence            999999999999988765899999999999999999999999974
>3ju1_A Enoyl-COA hydratase/isomerase family protein; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; HET: MSE; 2.30A {Shewanella oneidensis} Back     alignment and structure
>3bpt_A 3-hydroxyisobutyryl-COA hydrolase; coenzyme A, beta-hydroxyisobutyryl acid, querceti structural genomics consortium, SGC; HET: QUE; 1.50A {Homo sapiens} Back     alignment and structure
>3hrx_A Probable enoyl-COA hydratase; the spiral fold, the crotonase superfamily, lyase; 1.85A {Thermus thermophilus} Back     alignment and structure
>4fzw_C 1,2-epoxyphenylacetyl-COA isomerase; structural genomics, montreal-kingston bacterial structural initiative, BSGI, crotonase fold; 2.55A {Escherichia coli} Back     alignment and structure
>4fzw_A 2,3-dehydroadipyl-COA hydratase; structural genomics, montreal-kingston bacterial structural initiative, BSGI, crotonase fold; 2.55A {Escherichia coli} Back     alignment and structure
>3kqf_A Enoyl-COA hydratase/isomerase family protein; IDP02329, structural genomic for structural genomics of infectious diseases, csgid; HET: MSE; 1.80A {Bacillus anthracis} Back     alignment and structure
>3p5m_A Enoyl-COA hydratase/isomerase; seattle structural genomics center for infectious disease, S coenzyme A, tuberculosis; 2.05A {Mycobacterium avium} Back     alignment and structure
>3g64_A Putative enoyl-COA hydratase; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; 2.05A {Streptomyces coelicolor A3} Back     alignment and structure
>3sll_A Probable enoyl-COA hydratase/isomerase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.35A {Mycobacterium abscessus} Back     alignment and structure
>3pea_A Enoyl-COA hydratase/isomerase family protein; structural genomics, center for structural genomics of infec diseases, csgid; HET: FLC PG4; 1.82A {Bacillus anthracis} Back     alignment and structure
>1nzy_A Dehalogenase, 4-chlorobenzoyl coenzyme A dehalogenase; lyase; HET: BCA; 1.80A {Pseudomonas SP} SCOP: c.14.1.3 PDB: 1jxz_A* 1nzy_B* Back     alignment and structure
>3h81_A Enoyl-COA hydratase ECHA8; niaid, decode, infectious disease, MPCS, fatty acid metaboli metabolism, lyase, structural genomics; 1.80A {Mycobacterium tuberculosis} PDB: 3q0j_A* 3pzk_A 3q0g_A* Back     alignment and structure
>3hin_A Putative 3-hydroxybutyryl-COA dehydratase; structural genomics, protein structure INI NEW YORK structural genomix research consortium; 2.00A {Rhodopseudomonas palustris} Back     alignment and structure
>3rsi_A Putative enoyl-COA hydratase/isomerase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.00A {Mycobacterium abscessus} Back     alignment and structure
>3moy_A Probable enoyl-COA hydratase; ssgcid, seattle structural genomics center for infectious DI enoyl COA, actinobacteria, lyase; 1.50A {Mycobacterium smegmatis} Back     alignment and structure
>1dci_A Dienoyl-COA isomerase; lyase; 1.50A {Rattus norvegicus} SCOP: c.14.1.3 PDB: 2vre_A Back     alignment and structure
>1hzd_A AUH, AU-binding protein/enoyl-COA hydratase; RNA-binding protein,enoyl-COA hydratase, riken structural genomics/proteomics initiative, RSGI; 2.20A {Homo sapiens} SCOP: c.14.1.3 PDB: 2zqq_A 2zqr_A Back     alignment and structure
>2ppy_A Enoyl-COA hydratase; beta-oxidation, fatty acid metabol lyase, structural genomics, NPPSFA; 2.16A {Geobacillus kaustophilus} Back     alignment and structure
>3myb_A Enoyl-COA hydratase; ssgcid, struct genomics, seattle structural genomics center for infectious lyase; 1.55A {Mycobacterium smegmatis} Back     alignment and structure
>2pbp_A Enoyl-COA hydratase subunit I; B-oxidation, structural genomics, NPPSFA, nationa on protein structural and functional analyses; 1.80A {Geobacillus kaustophilus} PDB: 2qq3_A Back     alignment and structure
>3trr_A Probable enoyl-COA hydratase/isomerase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 2.09A {Mycobacterium abscessus} Back     alignment and structure
>2ej5_A Enoyl-COA hydratase subunit II; structural genomics, GK2038, NPPSFA, national project on prote structural and functional analyses; 2.00A {Geobacillus kaustophilus} Back     alignment and structure
>2vx2_A Enoyl-COA hydratase domain-containing protein 3; isomerase, fatty acid metabolism, transit peptide, lipid Met crontonase, mitochondrion, CAsp; 2.3A {Homo sapiens} Back     alignment and structure
>3i47_A Enoyl COA hydratase/isomerase (crotonase); structural genomics; 1.58A {Legionella pneumophila subsp} SCOP: c.14.1.0 Back     alignment and structure
>3r9t_A ECHA1_1; ssgcid, seattle structural genomics center for infectious DI enoyl-COA hydratase, lyase; 1.75A {Mycobacterium avium subsp} SCOP: c.14.1.0 PDB: 3r9s_A 3r0o_A Back     alignment and structure
>2fbm_A Y chromosome chromodomain protein 1, telomeric IS; acetyltransferase, structural genomics, structural genomics consortium, SGC, unknown function; 2.28A {Homo sapiens} SCOP: c.14.1.3 Back     alignment and structure
>3qk8_A Enoyl-COA hydratase ECHA15; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 1.60A {Mycobacterium marinum M} SCOP: c.14.1.0 PDB: 3q1t_A Back     alignment and structure
>1wz8_A Enoyl-COA hydratase; lyase, crotonase, hexamer, structural genomics, riken S genomics/proteomics initiative, RSGI; 1.80A {Thermus thermophilus} SCOP: c.14.1.3 Back     alignment and structure
>4f47_A Enoyl-COA hydratase ECHA19; ssgcid, seattle structural genomics center for infectious DI niaid; 1.75A {Mycobacterium marinum} Back     alignment and structure
>2gtr_A CDY-like, chromodomain Y-like protein; structural genomics, structural genomics consortium, SGC, unknown function; 1.90A {Homo sapiens} PDB: 2fw2_A Back     alignment and structure
>3oc7_A Enoyl-COA hydratase; seattle structural genomics center for infectious disease, S non-pathogenic mycobacterium species, ortholog; 1.50A {Mycobacterium avium} SCOP: c.14.1.0 Back     alignment and structure
>3swx_A Probable enoyl-COA hydratase/isomerase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.10A {Mycobacterium abscessus} Back     alignment and structure
>3tlf_A Enoyl-COA hydratase/isomerase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, otholog; 2.15A {Mycobacterium avium subsp} SCOP: c.14.1.0 Back     alignment and structure
>3fdu_A Putative enoyl-COA hydratase/isomerase; structural genomics, PSI-2; 2.00A {Acinetobacter baumannii} Back     alignment and structure
>1ef8_A Methylmalonyl COA decarboxylase; lyase; 1.85A {Escherichia coli} SCOP: c.14.1.3 PDB: 1ef9_A* Back     alignment and structure
>3qre_A Enoyl-COA hydratase, ECHA12_1; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 2.40A {Mycobacterium marinum M} Back     alignment and structure
>1mj3_A Enoyl-COA hydratase, mitochondrial; homohexamer, lyase; HET: HXC; 2.10A {Rattus norvegicus} SCOP: c.14.1.3 PDB: 2dub_A* 1dub_A* 1ey3_A* 2hw5_A* Back     alignment and structure
>1uiy_A Enoyl-COA hydratase; lyase, beta-oxidation, crotonase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.85A {Thermus thermophilus} SCOP: c.14.1.3 Back     alignment and structure
>3qxi_A Enoyl-COA hydratase ECHA1; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 2.20A {Mycobacterium marinum} Back     alignment and structure
>3qxz_A Enoyl-COA hydratase/isomerase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.35A {Mycobacterium abscessus} SCOP: c.14.1.0 Back     alignment and structure
>3lke_A Enoyl-COA hydratase; nysgrc, target 112 structural genomics, PSI-2, protein structure initiative; 1.70A {Bacillus halodurans} Back     alignment and structure
>3hp0_A Putative polyketide biosynthesis enoyl-COA hydratase homolog PKSH; polyketide synthase, enoyl COA hydratase,isomerase; 2.32A {Bacillus subtilis} Back     alignment and structure
>2uzf_A Naphthoate synthase; lyase, menaquinone biosynthesis; HET: CAA; 2.9A {Staphylococcus aureus} Back     alignment and structure
>3r9q_A Enoyl-COA hydratase/isomerase; ssgcid, lyase,isomerase; 2.10A {Mycobacterium abscessus} PDB: 3qka_A Back     alignment and structure
>2j5i_A P-hydroxycinnamoyl COA hydratase/lyase; vanillin, aldolase, crotonase, coenzyme-A; 1.8A {Pseudomonas fluorescens} PDB: 2j5i_B 2vss_A* 2j5i_I 2vss_F* 2vsu_A* 2vss_E* 2vsu_F* 2vsu_E* 2vsu_C* Back     alignment and structure
>4eml_A Naphthoate synthase; 1,4-dihydroxy-2-naphthoyl-coenzyme A, lyase; 2.04A {Synechocystis SP} Back     alignment and structure
>3he2_A Enoyl-COA hydratase ECHA6; fatty acid metabolism, lipid metabolism, lyase, structural genomics; HET: PGE; 2.30A {Mycobacterium tuberculosis} Back     alignment and structure
>2f6q_A Peroxisomal 3,2-trans-enoyl-COA isomerase; peroxisomes, fatty acid metabolism, STR genomics, structural genomics consortium, SGC; 1.95A {Homo sapiens} SCOP: c.14.1.3 Back     alignment and structure
>3t8b_A 1,4-dihydroxy-2-naphthoyl-COA synthase; crotonase superfamily, lyase; 1.65A {Mycobacterium tuberculosis} PDB: 3t8a_A 1rjm_A* 1rjn_A* 1q52_A 1q51_A Back     alignment and structure
>3t89_A 1,4-dihydroxy-2-naphthoyl-COA synthase; crotonase superfamily, lyase; 1.95A {Escherichia coli} PDB: 3t88_A 4elx_A 4elw_A 4els_A 3h02_A 2iex_A Back     alignment and structure
>3gkb_A Putative enoyl-COA hydratase; structural genomics, unknown function, PSI-2, protein struct initiative; 1.80A {Streptomyces avermitilis} Back     alignment and structure
>3rrv_A Enoyl-COA hydratase/isomerase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.45A {Mycobacterium avium subsp} Back     alignment and structure
>3qmj_A Enoyl-COA hydratase, ECHA8_6; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.20A {Mycobacterium marinum} Back     alignment and structure
>1sg4_A 3,2-trans-enoyl-COA isomerase, mitochondrial; crotonase fold; HET: CO8; 1.30A {Homo sapiens} SCOP: c.14.1.3 PDB: 1xx4_A Back     alignment and structure
>2a7k_A CARB; crotonase, antibiotic, beta-lactam, biosynthetic protein; 2.24A {Pectobacterium carotovorum} SCOP: c.14.1.3 PDB: 2a81_A* Back     alignment and structure
>3l3s_A Enoyl-COA hydratase/isomerase family protein; crotonase superfamily, dimer of trimers, PSI-2, NYSGXRC, structural genomics; 2.32A {Ruegeria pomeroyi} Back     alignment and structure
>3h0u_A Putative enoyl-COA hydratase; structural genomics, isomerase, PSI-2, protein structure initiative; 1.50A {Streptomyces avermitilis} Back     alignment and structure
>4di1_A Enoyl-COA hydratase ECHA17; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis, ortholog; 2.25A {Mycobacterium marinum} Back     alignment and structure
>3pe8_A Enoyl-COA hydratase; emerald biostructures, structural genomics, seattle structur genomics center for infectious disease, ssgcid, lyase; 1.60A {Mycobacterium smegmatis} PDB: 3p85_A* 3qyr_A Back     alignment and structure
>3lao_A Enoyl-COA hydratase/isomerase; alpha-beta sandwich, structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.40A {Pseudomonas aeruginosa} Back     alignment and structure
>3isa_A Putative enoyl-COA hydratase/isomerase; structural genomics, PSI-2, protein structure initiative, EN hydratase; 1.76A {Bordetella parapertussis} Back     alignment and structure
>2q35_A CURF; crotonase, lyase; 1.65A {Lyngbya majuscula} PDB: 2q34_A 2q2x_A Back     alignment and structure
>3m6n_A RPFF protein; enoyl-COA hydratase, lyase; 1.80A {Xanthomonas campestris PV} PDB: 3m6m_A Back     alignment and structure
>1pjh_A Enoyl-COA isomerase; ECI1P; beta-BETA-alpha spiral fold, inter-trimer contacts; 2.10A {Saccharomyces cerevisiae} SCOP: c.14.1.3 PDB: 1hno_A 1k39_A* 1hnu_A Back     alignment and structure
>3ot6_A Enoyl-COA hydratase/isomerase family protein; structural genomics, PSI-2, protein structure initiative; 2.50A {Pseudomonas syringae PV} Back     alignment and structure
>3r6h_A Enoyl-COA hydratase, ECHA3; ssgcid, mycobacerium marinum, structura genomics, seattle structural genomics center for infectious lyase; 1.75A {Mycobacterium marinum M} PDB: 4hc8_A* Back     alignment and structure
>2j5g_A ALR4455 protein; enzyme evolution, C-C bond hydrolase, hydrolase, lyase, crotonase, biocatalysis, beta-diketone; 1.46A {Anabaena SP} PDB: 2j5s_A* 2j5g_D Back     alignment and structure
>3njd_A Enoyl-COA hydratase; ssgcid, mycobacerium smegmatis, structu genomics, seattle structural genomics center for infectious lyase; 1.75A {Mycobacterium smegmatis} PDB: 3njb_A Back     alignment and structure
>1szo_A 6-oxocamphor hydrolase; enzyme-product complex; HET: CAX; 1.90A {Rhodococcus SP} SCOP: c.14.1.3 PDB: 1o8u_A Back     alignment and structure
>2wtb_A MFP2, fatty acid multifunctional protein (ATMFP2); oxidoreductase, peroxisomes, beta-oxidation, fatty acid oxidation; 2.50A {Arabidopsis thaliana} Back     alignment and structure
>1wdk_A Fatty oxidation complex alpha subunit; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: a.100.1.3 a.100.1.3 c.2.1.6 c.14.1.3 PDB: 1wdl_A* 1wdm_A* 2d3t_A* Back     alignment and structure
>3zwc_A Peroxisomal bifunctional enzyme; beta oxidation pathway, oxidoreductase, lipid metabolism, LY isomerase, peroxisome, fatty acid metabolism; HET: NAD HSC; 2.30A {Rattus norvegicus} PDB: 3zw9_A* 3zw8_A* 3zwa_A* 3zwb_A* 2x58_A* Back     alignment and structure
>2np9_A DPGC; protein inhibitor complex, oxidoreductase; HET: YE1; 2.45A {Streptomyces toyocaensis} PDB: 2pg8_A* Back     alignment and structure
>3t3w_A Enoyl-COA hydratase; ssgcid, structural genomics, seattle ST genomics center for infectious disease, lyase; 1.80A {Mycobacterium thermoresistibile} PDB: 3ome_A Back     alignment and structure
>2w3p_A Benzoyl-COA-dihydrodiol lyase; BOXC, crotonase, ring cleaving, burkholderia xenovorans LB400 crotonase; 1.50A {Burkholderia xenovorans} Back     alignment and structure
>3viv_A 441AA long hypothetical NFED protein; protein-peptide complex, alpha / beta motif, protease, membr protein stomatin, hydrolase-protein binding complex; 2.25A {Pyrococcus horikoshii} PDB: 3bpp_A 2deo_A Back     alignment and structure
>3rst_A Signal peptide peptidase SPPA; alpha/beta protein fold, signal peptide digestion, bacterial membrane, hydrolase; 2.37A {Bacillus subtilis} Back     alignment and structure
>3bf0_A Protease 4; bacterial, hydrolase, inner membrane, membrane, transmembrane; 2.55A {Escherichia coli} PDB: 3bez_A Back     alignment and structure
>1y7o_A ATP-dependent CLP protease proteolytic subunit; hydrolase; 2.51A {Streptococcus pneumoniae} SCOP: c.14.1.1 Back     alignment and structure
>2f9y_A Acetyl-COA carboxylase, carboxyltransferase alpha; zinc ribbon, crotonase superfamily, spiral domain, ligase; 3.20A {Escherichia coli} SCOP: c.14.1.4 Back     alignment and structure
>2f9i_A Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha; zinc ribbon, crotonase superfamily, spiral domain; 1.98A {Staphylococcus aureus} Back     alignment and structure
>2f9y_B Acetyl-coenzyme A carboxylase carboxyl transferas beta; zinc ribbon, crotonase superfamily, spiral domain, ligase; 3.20A {Escherichia coli} SCOP: c.14.1.4 Back     alignment and structure
>2cby_A ATP-dependent CLP protease proteolytic subunit 1; serine protease, endopept mycobacterium tuberculosis, ATP-dependent protease; 2.6A {Mycobacterium tuberculosis} SCOP: c.14.1.1 PDB: 2c8t_A 2ce3_A Back     alignment and structure
>3qwd_A ATP-dependent CLP protease proteolytic subunit; caseinolytic protease, serin-protease, hydrolase; 2.10A {Staphylococcus aureus subsp} SCOP: c.14.1.1 PDB: 3v5e_A 3v5i_A 3sta_V 3st9_A Back     alignment and structure
>2f6i_A ATP-dependent CLP protease, putative; structural genomics, structural genomics conso SGC, hydrolase; 2.45A {Plasmodium falciparum} SCOP: c.14.1.1 Back     alignment and structure
>1yg6_A ATP-dependent CLP protease proteolytic subunit; endopeptidase CLP, caseinolytic protease, protease TI, heat shock protein F21.5, hydrolase; 1.90A {Escherichia coli} SCOP: c.14.1.1 PDB: 1tyf_A 2fzs_A* 3mt6_R 1yg8_A 3hln_A 2zl2_A 2zl0_A 2zl4_A 2zl3_A 3tt7_A* 3tt6_A 3ktg_A 3kth_A 3kti_A* 3ktj_A* 3ktk_A* 3q7h_A Back     alignment and structure
>1tg6_A Putative ATP-dependent CLP protease proteolytic S; mitochondrial CLPP, CLP/HSP 100, ATP-dependent protease, HYD; HET: FME; 2.10A {Homo sapiens} SCOP: c.14.1.1 Back     alignment and structure
>3p2l_A ATP-dependent CLP protease proteolytic subunit; structural genomics, center for structural genomics of infec diseases, csgid; 2.29A {Francisella tularensis subsp} SCOP: c.14.1.1 Back     alignment and structure
>4gm2_A ATP-dependent CLP protease proteolytic subunit; structural genomics, structural genomics consortium, SGC, PR hydrolase; 2.80A {Plasmodium falciparum} PDB: 4hnk_A Back     alignment and structure
>1pix_A Glutaconyl-COA decarboxylase A subunit; biotin-dependent ION pump, carboxyltransferase, lyase; 2.20A {Acidaminococcus fermentans} SCOP: c.14.1.4 c.14.1.4 Back     alignment and structure
>2f9i_B Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta; zinc ribbon, crotonase superfamily, spiral domain; 1.98A {Staphylococcus aureus} Back     alignment and structure
>3iav_A Propionyl-COA carboxylase complex B subunit; accase, pccase, ACC, PCC, CT, carboxyltransfe polyketide, fatty acid, PKS, FAS; 1.75A {Streptomyces coelicolor} PDB: 1xnw_A 3ib9_A* 3ibb_A 3mfm_C 1xny_A* 1xnv_A* 1xo6_A Back     alignment and structure
>3n6r_B Propionyl-COA carboxylase, beta subunit; protein complex, biotin-dependent carboxylase, ligase; HET: BTI; 3.20A {Roseobacter denitrificans} Back     alignment and structure
>1x0u_A Hypothetical methylmalonyl-COA decarboxylase ALPH; lyase; 2.20A {Sulfolobus tokodaii} Back     alignment and structure
>3bf0_A Protease 4; bacterial, hydrolase, inner membrane, membrane, transmembrane; 2.55A {Escherichia coli} PDB: 3bez_A Back     alignment and structure
>1x0u_A Hypothetical methylmalonyl-COA decarboxylase ALPH; lyase; 2.20A {Sulfolobus tokodaii} Back     alignment and structure
>3u9r_B MCC beta, methylcrotonyl-COA carboxylase, beta-subunit; carboxyltransferase, beta-BETA-alpha superhelix, ligase; HET: 1PE; 1.50A {Pseudomonas aeruginosa} PDB: 3u9s_B* 3u9t_B Back     alignment and structure
>1on3_A Methylmalonyl-COA carboxyltransferase 12S subunit; domain duplication, multienzyme complex, transcarboxylase; HET: MCA; 1.90A {Propionibacterium freudenreichii} SCOP: c.14.1.4 c.14.1.4 PDB: 1on9_A* Back     alignment and structure
>2bzr_A Propionyl-COA carboxylase beta chain 5; fatty acid biosynthesis, accase, ligase, transferase; 2.2A {Mycobacterium tuberculosis} PDB: 2a7s_A Back     alignment and structure
>1vrg_A Propionyl-COA carboxylase, beta subunit; TM0716, structural joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE; 2.30A {Thermotoga maritima} SCOP: c.14.1.4 c.14.1.4 Back     alignment and structure
>2w3p_A Benzoyl-COA-dihydrodiol lyase; BOXC, crotonase, ring cleaving, burkholderia xenovorans LB400 crotonase; 1.50A {Burkholderia xenovorans} Back     alignment and structure
>2bzr_A Propionyl-COA carboxylase beta chain 5; fatty acid biosynthesis, accase, ligase, transferase; 2.2A {Mycobacterium tuberculosis} PDB: 2a7s_A Back     alignment and structure
>1on3_A Methylmalonyl-COA carboxyltransferase 12S subunit; domain duplication, multienzyme complex, transcarboxylase; HET: MCA; 1.90A {Propionibacterium freudenreichii} SCOP: c.14.1.4 c.14.1.4 PDB: 1on9_A* Back     alignment and structure
>1pix_A Glutaconyl-COA decarboxylase A subunit; biotin-dependent ION pump, carboxyltransferase, lyase; 2.20A {Acidaminococcus fermentans} SCOP: c.14.1.4 c.14.1.4 Back     alignment and structure
>3gf3_A Glutaconyl-COA decarboxylase subunit A; sodium ION transport, biotin, glutamate fermentation, lyase; HET: COO; 1.75A {Clostridium symbiosum} PDB: 3gf7_A 3glm_A* 3gma_A* Back     alignment and structure
>3n6r_B Propionyl-COA carboxylase, beta subunit; protein complex, biotin-dependent carboxylase, ligase; HET: BTI; 3.20A {Roseobacter denitrificans} Back     alignment and structure
>3iav_A Propionyl-COA carboxylase complex B subunit; accase, pccase, ACC, PCC, CT, carboxyltransfe polyketide, fatty acid, PKS, FAS; 1.75A {Streptomyces coelicolor} PDB: 1xnw_A 3ib9_A* 3ibb_A 3mfm_C 1xny_A* 1xnv_A* 1xo6_A Back     alignment and structure
>3k8x_A Acetyl-COA carboxylase; transferase, carboxyltransferase, AC tepraloxydim, ATP-binding, biotin, fatty acid biosynthesis; HET: B89; 2.30A {Saccharomyces cerevisiae} PDB: 1w2x_A* 3h0s_A* 3h0j_A* 3h0q_A* 1od2_A* 1od4_A* 3pgq_A* 3tvu_A* 3tv5_A* 3tvw_A* 3tz3_A* 1uyr_A* 1uys_A* 1uyt_A 1uyv_A Back     alignment and structure
>2x24_A Acetyl-COA carboxylase; fatty acid biosynthesis, ligase, lipid synthesis; HET: X24; 2.40A {Bos taurus} PDB: 3ff6_A* 3tdc_A* Back     alignment and structure
>1vrg_A Propionyl-COA carboxylase, beta subunit; TM0716, structural joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE; 2.30A {Thermotoga maritima} SCOP: c.14.1.4 c.14.1.4 Back     alignment and structure
>3u9r_B MCC beta, methylcrotonyl-COA carboxylase, beta-subunit; carboxyltransferase, beta-BETA-alpha superhelix, ligase; HET: 1PE; 1.50A {Pseudomonas aeruginosa} PDB: 3u9s_B* 3u9t_B Back     alignment and structure
>3gf3_A Glutaconyl-COA decarboxylase subunit A; sodium ION transport, biotin, glutamate fermentation, lyase; HET: COO; 1.75A {Clostridium symbiosum} PDB: 3gf7_A 3glm_A* 3gma_A* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 293
d1mj3a_260 c.14.1.3 (A:) Enoyl-CoA hydratase (crotonase) {Rat 6e-12
>d1mj3a_ c.14.1.3 (A:) Enoyl-CoA hydratase (crotonase) {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 260 Back     information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: ClpP/crotonase
superfamily: ClpP/crotonase
family: Crotonase-like
domain: Enoyl-CoA hydratase (crotonase)
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 62.1 bits (150), Expect = 6e-12
 Identities = 23/83 (27%), Positives = 36/83 (43%), Gaps = 1/83 (1%)

Query: 10  SLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSY 69
           S    I+  KKP I+ ++G  +G G  ++         EK     PE  +G  P  G + 
Sbjct: 88  SHWDHITRIKKPVIAAVNGYALGGGCELAMMCDIIYAGEKAQFGQPEILLGTIPGAGGTQ 147

Query: 70  IAAKGPGGGSVGAYLGMTGKRIS 92
              +   G S+   + +TG RIS
Sbjct: 148 RLTRAV-GKSLAMEMVLTGDRIS 169

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query293
d1hzda_266 AUH protein {Human (Homo sapiens) [TaxId: 9606]} 100.0
d2fw2a1258 Chromodomain protein CDY2A {Human (Homo sapiens) [ 100.0
d1mj3a_260 Enoyl-CoA hydratase (crotonase) {Rat (Rattus norve 100.0
d1wz8a1263 Probable enoyl-CoA hydratase TTHA0218 {Thermus the 100.0
d1dcia_275 Dienoyl-CoA isomerase (delta3-delta2-enoyl-CoA iso 100.0
d1uiya_253 Enoyl-CoA hydratase (crotonase) {Thermus thermophi 100.0
d1nzya_269 4-Chlorobenzoyl-CoA dehalogenase {Pseudomonas sp., 100.0
d1ef8a_261 Methylmalonyl CoA decarboxylase {Escherichia coli 100.0
d1q52a_297 Naphthoate synthase MenB {Mycobacterium tuberculos 100.0
d2f6qa1245 Peroxisomal 3,2-trans-enoyl-CoA isomerase {Human ( 99.98
d1wdka4310 Fatty oxidation complex alpha subunit, N-terminal 99.97
d1sg4a1249 Dienoyl-CoA isomerase (delta3-delta2-enoyl-CoA iso 99.97
d2a7ka1230 Carbapenem biosynthes protein CarB {Pectobacterium 99.97
d1pjha_266 Dienoyl-CoA isomerase (delta3-delta2-enoyl-CoA iso 99.96
d1szoa_249 6-oxo camphor hydrolase {Rhodococcus erythropolis 99.94
d2cbya1179 Clp protease, ClpP subunit {Mycobacterium tubercul 97.88
d1yg6a1183 Clp protease, ClpP subunit {Escherichia coli [TaxI 97.76
d1y7oa1192 Clp protease, ClpP subunit {Streptococcus pneumoni 97.72
d2f6ia1190 Clp protease, ClpP subunit {Plasmodium falciparum 97.65
d1tg6a1193 Clp protease, ClpP subunit {Human (Homo sapiens), 97.63
d2f9ya1316 Acetyl-coenzyme A carboxylase carboxyl transferase 97.17
d1pixa2287 Glutaconyl-CoA decarboxylase A subunit {Acidaminoc 96.49
d2f9yb1263 Acetyl-coenzyme A carboxylase carboxyl transferase 96.45
d1vrga1251 Propionyl-CoA carboxylase complex B subunit, PccB 96.06
d1on3a1253 Methylmalonyl-CoA carboxyltransferase (transcarbox 95.64
d2a7sa1258 Propionyl-CoA carboxylase complex B subunit, PccB 95.43
d1uyra1333 Acetyl-coenzyme A carboxylase {Baker's yeast (Sacc 94.37
d2a7sa2271 Propionyl-CoA carboxylase complex B subunit, PccB 94.26
d1xnya1258 Propionyl-CoA carboxylase complex B subunit, PccB 93.57
d1xnya2263 Propionyl-CoA carboxylase complex B subunit, PccB 93.08
d1vrga2264 Propionyl-CoA carboxylase complex B subunit, PccB 93.01
d1on3a2264 Methylmalonyl-CoA carboxyltransferase (transcarbox 92.43
d1pixa3299 Glutaconyl-CoA decarboxylase A subunit {Acidaminoc 89.06
d1uyra2404 Acetyl-coenzyme A carboxylase {Baker's yeast (Sacc 86.14
>d1hzda_ c.14.1.3 (A:) AUH protein {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: ClpP/crotonase
superfamily: ClpP/crotonase
family: Crotonase-like
domain: AUH protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=7.1e-40  Score=294.49  Aligned_cols=184  Identities=15%  Similarity=0.199  Sum_probs=170.6

Q ss_pred             HHHHHHHHHHHHHHhCCCcEEEEECCccchhHHHHhhhcCeEEEeCCeEEeCcccCCCCCCCchHHHHHhcCCCcHHHHH
Q 022721            3 EVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKGPGGGSVGA   82 (293)
Q Consensus         3 ~~~~~~~~l~~~i~~~~kPvIa~vnG~a~GgG~~lal~~D~riate~a~f~~pe~~lGl~p~~g~~~~l~r~~G~~~~a~   82 (293)
                      .+.+..+.++..|.++|||+||+|||+|+|||++|+++||||||+++++|++||+++|++|++|++++|++++|.. .++
T Consensus        83 ~~~~~~~~~~~~i~~~~kpvIaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~~~ig~~-~a~  161 (266)
T d1hzda_          83 PFVSKIRAVINDIANLPVPTIAAIDGLALGGGLELALACDIRVAASSAKMGLVETKLAIIPGGGGTQRLPRAIGMS-LAK  161 (266)
T ss_dssp             HHHHHHHHHHHHHHTCSSCEEEEESEEEETHHHHHHHHSSEEEEETTCEEECCGGGGTCCCCSSHHHHHHHHHCHH-HHH
T ss_pred             hhhhHHHHHHHHHhcCCcccccccccccccccceeccccceeeecCCcEEeecccceeecCCccceeeehhhhHHH-HHH
Confidence            5677788999999999999999999999999999999999999999999999999999999999999999999998 999


Q ss_pred             HHhhcCCCCCCHHHHHHcCccceeccCCChHHHHHHHHhcccCCCchhHHHHHHHhhcCCCCCCchhccchhHHHhhhCC
Q 022721           83 YLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVALLAKYSSDPEGEAPLKLLLPQITSCFSS  162 (293)
Q Consensus        83 ~l~ltG~~l~~a~eA~~~Gl~~~~v~~~~l~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~i~~~f~~  162 (293)
                      +|++||+.++ |++|+++||+|++||++++.+..                                              
T Consensus       162 ~l~ltg~~~~-a~eA~~~Glv~~vv~~~~l~~~~----------------------------------------------  194 (266)
T d1hzda_         162 ELIFSARVLD-GKEAKAVGLISHVLEQNQEGDAA----------------------------------------------  194 (266)
T ss_dssp             HHHHHTCEEE-HHHHHHHTSCSEEECCCTTSCHH----------------------------------------------
T ss_pred             hhhccCCccC-HHHhhcccccccccChhhhhhHH----------------------------------------------
Confidence            9999999999 99999999999999998865533                                              


Q ss_pred             CCCHHHHHHHHHhcccccchhHHHHHHHHHHHHhccCcHHHHHHHHHHHHHhhhcCCCccccCCHHHHHHHHHHHHHhhC
Q 022721          163 EKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVASAHGKTDNELSKLSGVMKYEYRVALRSS  242 (293)
Q Consensus       163 ~~t~~~i~~~l~~~~~~~~~~~~~~a~~~~~~i~~~sp~sl~~~k~~l~~~~~~~~~~~~~~~~~~e~l~~e~~~~~~~~  242 (293)
                                            .++|.+.++++..+||.+++.+|+++++..         ..+++++++.|...+..++
T Consensus       195 ----------------------~~~a~~~a~~i~~~~p~a~~~~K~~l~~~~---------~~~~~~~l~~e~~~~~~~~  243 (266)
T d1hzda_         195 ----------------------YRKALDLAREFLPQGPVAMRVAKLAINQGM---------EVDLVTGLAIEEACYAQTI  243 (266)
T ss_dssp             ----------------------HHHHHHHHHTTTTSCHHHHHHHHHHHHHHH---------TSCHHHHHHHHHHHHHTTT
T ss_pred             ----------------------HHHHHHHHHhcccCChHHHHHHHHHHHHHh---------cCCHHHHHHHHHHHHHHHh
Confidence                                  235555555999999999999999999987         6789999999999999999


Q ss_pred             CCCcHHHHHHHHhhCCCCCCCCCCC
Q 022721          243 LRSDFAEGVRAVLVDKDQNPKWNPA  267 (293)
Q Consensus       243 ~~~d~~egv~a~lv~k~r~P~w~~~  267 (293)
                      .++|++||++||+ +| |+|+|++|
T Consensus       244 ~s~d~~Eg~~AF~-eK-R~P~f~Gk  266 (266)
T d1hzda_         244 PTKDRLEGLLAFK-EK-RPPRYKGE  266 (266)
T ss_dssp             TCHHHHHHHHHHT-TT-SCCCCCCC
T ss_pred             CCHHHHHHHHHHh-CC-CCCCCCCC
Confidence            9999999999999 99 99999986
>d2fw2a1 c.14.1.3 (A:3-260) Chromodomain protein CDY2A {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1mj3a_ c.14.1.3 (A:) Enoyl-CoA hydratase (crotonase) {Rat (Rattus norvegicus) [TaxId: 10116]} Back     information, alignment and structure
>d1wz8a1 c.14.1.3 (A:2-264) Probable enoyl-CoA hydratase TTHA0218 {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1dcia_ c.14.1.3 (A:) Dienoyl-CoA isomerase (delta3-delta2-enoyl-CoA isomerase) {Rat (Rattus norvegicus) [TaxId: 10116]} Back     information, alignment and structure
>d1uiya_ c.14.1.3 (A:) Enoyl-CoA hydratase (crotonase) {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1nzya_ c.14.1.3 (A:) 4-Chlorobenzoyl-CoA dehalogenase {Pseudomonas sp., strain CBS-3 [TaxId: 306]} Back     information, alignment and structure
>d1ef8a_ c.14.1.3 (A:) Methylmalonyl CoA decarboxylase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1q52a_ c.14.1.3 (A:) Naphthoate synthase MenB {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure
>d2f6qa1 c.14.1.3 (A:108-352) Peroxisomal 3,2-trans-enoyl-CoA isomerase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1wdka4 c.14.1.3 (A:1-310) Fatty oxidation complex alpha subunit, N-terminal domain {Pseudomonas fragi [TaxId: 296]} Back     information, alignment and structure
>d1sg4a1 c.14.1.3 (A:2-250) Dienoyl-CoA isomerase (delta3-delta2-enoyl-CoA isomerase) {Human (Homo sapiens), mitochondrial [TaxId: 9606]} Back     information, alignment and structure
>d2a7ka1 c.14.1.3 (A:1-230) Carbapenem biosynthes protein CarB {Pectobacterium carotovorum [TaxId: 554]} Back     information, alignment and structure
>d1pjha_ c.14.1.3 (A:) Dienoyl-CoA isomerase (delta3-delta2-enoyl-CoA isomerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1szoa_ c.14.1.3 (A:) 6-oxo camphor hydrolase {Rhodococcus erythropolis [TaxId: 1833]} Back     information, alignment and structure
>d2cbya1 c.14.1.1 (A:15-193) Clp protease, ClpP subunit {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure
>d1yg6a1 c.14.1.1 (A:11-193) Clp protease, ClpP subunit {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1y7oa1 c.14.1.1 (A:2-193) Clp protease, ClpP subunit {Streptococcus pneumoniae [TaxId: 1313]} Back     information, alignment and structure
>d2f6ia1 c.14.1.1 (A:177-366) Clp protease, ClpP subunit {Plasmodium falciparum [TaxId: 5833]} Back     information, alignment and structure
>d1tg6a1 c.14.1.1 (A:1-193) Clp protease, ClpP subunit {Human (Homo sapiens), mitochondrial [TaxId: 9606]} Back     information, alignment and structure
>d2f9ya1 c.14.1.4 (A:4-319) Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha, AccA {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1pixa2 c.14.1.4 (A:1-287) Glutaconyl-CoA decarboxylase A subunit {Acidaminococcus fermentans [TaxId: 905]} Back     information, alignment and structure
>d2f9yb1 c.14.1.4 (B:23-285) Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, AccD {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1vrga1 c.14.1.4 (A:1-251) Propionyl-CoA carboxylase complex B subunit, PccB {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1on3a1 c.14.1.4 (A:8-260) Methylmalonyl-CoA carboxyltransferase (transcarboxylase 12S) {Propionibacterium freudenreichii [TaxId: 1744]} Back     information, alignment and structure
>d2a7sa1 c.14.1.4 (A:20-277) Propionyl-CoA carboxylase complex B subunit, PccB {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure
>d1uyra1 c.14.1.4 (A:1482-1814) Acetyl-coenzyme A carboxylase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d2a7sa2 c.14.1.4 (A:278-548) Propionyl-CoA carboxylase complex B subunit, PccB {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure
>d1xnya1 c.14.1.4 (A:10-267) Propionyl-CoA carboxylase complex B subunit, PccB {Streptomyces coelicolor [TaxId: 1902]} Back     information, alignment and structure
>d1xnya2 c.14.1.4 (A:268-530) Propionyl-CoA carboxylase complex B subunit, PccB {Streptomyces coelicolor [TaxId: 1902]} Back     information, alignment and structure
>d1vrga2 c.14.1.4 (A:252-515) Propionyl-CoA carboxylase complex B subunit, PccB {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1on3a2 c.14.1.4 (A:261-524) Methylmalonyl-CoA carboxyltransferase (transcarboxylase 12S) {Propionibacterium freudenreichii [TaxId: 1744]} Back     information, alignment and structure
>d1pixa3 c.14.1.4 (A:288-586) Glutaconyl-CoA decarboxylase A subunit {Acidaminococcus fermentans [TaxId: 905]} Back     information, alignment and structure
>d1uyra2 c.14.1.4 (A:1815-2218) Acetyl-coenzyme A carboxylase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure