Citrus Sinensis ID: 022741

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290---
MQTEARVGVVVEGGQRGLSSGNGSVSVDKITLQQQQKQMLQNQSQIGTISQLLAGGVAGALSKTCTAPLARLTILFQVQGMHSDTATLRKASIWREASRIISEEGFRAFWKGNLVTIAHRLPYSSVNFYAYEHYKKLLHAIPVVESQGENMSSDLFVHFVSGGLAGITAASVTYPLDLVRTRLAAQTNVIYYRGICHALQTICRDEGIWGLYKGLGATLLGVGPSIAISFSVYETLRSFWQSRRQNDSPVLVSLACGSLSGIASSTAVYRAFDAETEDVGLALHQVFNQSDPY
cHHHHHHHHHHHcccccccccHHHHHHHHccHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHcccHHHHHHHHHcccccccccHHHHccHHHHHHHHHHHccccccccHHHHHHHHHcHHHHHHHHHHHHHHHHHHcccccccccccccccHHHHHHHHHHHHHHHHHHHccHHHHHHHHcccccccccccHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHcccccccccccc
ccHHHHHHHHHHcccHHHHcccHHHHHHHccHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHcccHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcccccccccHHHHHHHHHHHcccHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHEccHHHHHHHHHHHHccccccccccc
MQTEARVGVVVeggqrglssgngsvsvdKITLQQQQKQMLQNQSQIGTISQLLAGGVAGALSKTCTAPLARLTILFQVQGMHSDTATLRKASIWREASRIISEEGFRAFWKGNLVTIAhrlpyssvnfYAYEHYKKLLHAIPvvesqgenmssDLFVHFVSGGLAGITAASVTYPLDLVRTRLAAQTNVIYYRGICHALQTICRDEGIWGLYKGLGatllgvgpsiAISFSVYETLRSFWQsrrqndspvLVSLACGSLSGIASSTAVYRAFDAETEDVGLALHQVFNQSDPY
mqtearvgvvveggqrglssgngSVSVDKITLQQQQKQMLQNQSQIGTISQLLAGGVAGALSKTCTAPLARLTILFQVQGMHSDTATLRKASIWREASRIISEEGFRAFWKGNLVTIAHRLPYSSVNFYAYEHYKKLLHAIPVVESQGENMSSDLFVHFVSGGLAGITAASVTYPLDLVRTRLAAQTNVIYYRGICHALQTICRDEGIWGLYKGLGATLLGVGPSIAISFSVYETLRSFWQSRRQNDSPVLVSLACGSLSGIASSTAVYRAFDAETEDVGLALHQVFNQSDPY
MQTEArvgvvveggqrgLSSGNGSVSVDKITLqqqqkqmlqnqsqIGTISQLLAGGVAGALSKTCTAPLARLTILFQVQGMHSDTATLRKASIWREASRIISEEGFRAFWKGNLVTIAHRLPYSSVNFYAYEHYKKLLHAIPVVESQGENMSSDLFVHFVSGGLAGITAASVTYPLDLVRTRLAAQTNVIYYRGICHALQTICRDEGIWGLYKGLGATLLGVGPSIAISFSVYETLRSFWQSRRQNDSPVLVSLACGSLSGIASSTAVYRAFDAETEDVGLALHQVFNQSDPY
*********************************************IGTISQLLAGGVAGALSKTCTAPLARLTILFQVQGMHSDTATLRKASIWREASRIISEEGFRAFWKGNLVTIAHRLPYSSVNFYAYEHYKKLLHAIPVVESQGENMSSDLFVHFVSGGLAGITAASVTYPLDLVRTRLAAQTNVIYYRGICHALQTICRDEGIWGLYKGLGATLLGVGPSIAISFSVYETLRSFWQSRRQNDSPVLVSLACGSLSGIASSTAVYRAFDAETEDVGLALHQVF******
**TEARVGVVVEGGQRGLSSGNGSVSVDKITLQQQQKQMLQNQSQIGTISQLLAGGVAGALSKTCTAPLARLTILFQVQG***********SIWREASRIISEEGFRAFWKGNLVTIAHRLPYSSVNFYAYEHYKKLLHAIPVVESQGENMSSDLFVHFVSGGLAGITAASVTYPLDLVRTRLAAQTNVIYYRGICHALQTICRDEGIWGLYKGLGATLLGVGPSIAISFSVYETLRSFWQSRRQNDSPVLVSLACGSLSGIASSTAVYRAFDAET*****************
MQTEARVGVVVEGGQRGLSSGNGSVSVDKITLQ**********SQIGTISQLLAGGVAGALSKTCTAPLARLTILFQVQGMHSDTATLRKASIWREASRIISEEGFRAFWKGNLVTIAHRLPYSSVNFYAYEHYKKLLHAIPVVESQGENMSSDLFVHFVSGGLAGITAASVTYPLDLVRTRLAAQTNVIYYRGICHALQTICRDEGIWGLYKGLGATLLGVGPSIAISFSVYETLRSFWQSRRQNDSPVLVSLACGSLSGIASSTAVYRAFDAETEDVGLALHQVFNQSDPY
*QTEARVGVVVEGGQRGLSSGNGSVSVDKITLQQQQKQMLQNQSQIGTISQLLAGGVAGALSKTCTAPLARLTILFQVQGMHSDTATLRKASIWREASRIISEEGFRAFWKGNLVTIAHRLPYSSVNFYAYEHYKKLLHAIPVVESQGENMSSDLFVHFVSGGLAGITAASVTYPLDLVRTRLAAQTNVIYYRGICHALQTICRDEGIWGLYKGLGATLLGVGPSIAISFSVYETLRSFWQSRRQNDSPVLVSLACGSLSGIASSTAVYRAFDAETEDVGLAL**********
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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oooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiii
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MQTEARVGVVVEGGQRGLSSGNGSVSVDKITLQQQQKQMLQNQSQIGTISQLLAGGVAGALSKTCTAPLARLTILFQVQGMHSDTATLRKASIWREASRIISEEGFRAFWKGNLVTIAHRLPYSSVNFYAYEHYKKLLHAIPVVESQGENMSSDLFVHFVSGGLAGITAASVTYPLDLVRTRLAAQTNVIYYRGICHALQTICRDEGIWGLYKGLGATLLGVGPSIAISFSVYETLRSFWQSRRQNDSPVLVSLACGSLSGIASSTAVYRAFDAETEDVGLALHQVFNQSDPY
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query293 2.2.26 [Sep-21-2011]
Q54MZ4434 Mitochondrial substrate c yes no 0.784 0.529 0.369 3e-36
Q6NUK1477 Calcium-binding mitochond yes no 0.699 0.429 0.400 3e-36
Q8BMD8475 Calcium-binding mitochond yes no 0.689 0.425 0.399 1e-34
A5PJZ1477 Calcium-binding mitochond yes no 0.699 0.429 0.396 2e-34
O18757475 Calcium-binding mitochond yes no 0.692 0.427 0.391 3e-33
O04619352 Mitochondrial adenine nuc no no 0.730 0.607 0.371 7e-33
Q5XHA0473 Calcium-binding mitochond no no 0.699 0.433 0.363 7e-32
Q7ZYD5514 Calcium-binding mitochond N/A no 0.767 0.437 0.346 1e-31
Q7T0U6473 Calcium-binding mitochond N/A no 0.699 0.433 0.358 1e-31
Q7ZY36473 Calcium-binding mitochond N/A no 0.699 0.433 0.354 2e-31
>sp|Q54MZ4|MCFB_DICDI Mitochondrial substrate carrier family protein B OS=Dictyostelium discoideum GN=mcfB PE=3 SV=1 Back     alignment and function desciption
 Score =  152 bits (384), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 89/241 (36%), Positives = 133/241 (55%), Gaps = 11/241 (4%)

Query: 32  LQQQQKQMLQNQSQIGTISQLLAGGVAGALSKTCTAPLARLTILFQVQGMH--SDTATLR 89
           LQ   K ++   + + +   LL+GGVAGA+S+TCT+PL RL IL QV  M+   +    +
Sbjct: 122 LQYSTKPIVHAPADVPSWKLLLSGGVAGAVSRTCTSPLERLKILNQVGHMNLEQNAPKYK 181

Query: 90  KASIWREASRIISEEGFRAFWKGNLVTIAHRLPYSSVNFYAYEHYKKLLHAIPVVESQGE 149
              I +    + + EGF  F+KGN   +    PYS++ F +YE YK  L       +  +
Sbjct: 182 GRGIIQSLKTMYTTEGFIGFFKGNGTNVIRIAPYSAIQFLSYEKYKNFLL------NNND 235

Query: 150 NMSSDLFVHFVSGGLAGITAASVTYPLDLVRTRLAAQTNVIYYRGICHALQTICRDEGIW 209
                 + +   GG AG+T+   TYPLDL+R+RL  Q     Y GI    + I R+EG+ 
Sbjct: 236 QTHLTTYENLFVGGAAGVTSLLCTYPLDLIRSRLTVQVFGNKYNGIADTCKMIIREEGVA 295

Query: 210 GLYKGLGATLLGVGPSIAISFSVYETLRSFWQSRRQNDSPVLV-SLACGSLSGIASSTAV 268
           GLYKGL A+ LGV P +AI+F+ YE L+  +  +  + +P +V SL  G++SG  + T  
Sbjct: 296 GLYKGLFASALGVAPYVAINFTTYENLKKTFIPK--DTTPTVVQSLTFGAISGATAQTLT 353

Query: 269 Y 269
           Y
Sbjct: 354 Y 354
Calcium-dependent mitochondrial solute carrier. Mitochondrial solute carriers shuttle metabolites, nucleotides, and cofactors through the mitochondrial inner membrane.
Dictyostelium discoideum (taxid: 44689)
>sp|Q6NUK1|SCMC1_HUMAN Calcium-binding mitochondrial carrier protein SCaMC-1 OS=Homo sapiens GN=SLC25A24 PE=1 SV=2 Back     alignment and function description
>sp|Q8BMD8|SCMC1_MOUSE Calcium-binding mitochondrial carrier protein SCaMC-1 OS=Mus musculus GN=Slc25a24 PE=2 SV=1 Back     alignment and function description
>sp|A5PJZ1|SCMC1_BOVIN Calcium-binding mitochondrial carrier protein SCaMC-1 OS=Bos taurus GN=SLC25A24 PE=2 SV=1 Back     alignment and function description
>sp|O18757|SCMC1_RABIT Calcium-binding mitochondrial carrier protein SCaMC-1 OS=Oryctolagus cuniculus GN=SLC25A24 PE=1 SV=1 Back     alignment and function description
>sp|O04619|ADNT1_ARATH Mitochondrial adenine nucleotide transporter ADNT1 OS=Arabidopsis thaliana GN=ADNT1 PE=2 SV=1 Back     alignment and function description
>sp|Q5XHA0|SCMC1_XENTR Calcium-binding mitochondrial carrier protein SCaMC-1 OS=Xenopus tropicalis GN=slc25a24 PE=2 SV=1 Back     alignment and function description
>sp|Q7ZYD5|SCMC2_XENLA Calcium-binding mitochondrial carrier protein SCaMC-2 OS=Xenopus laevis GN=slc25a25 PE=2 SV=1 Back     alignment and function description
>sp|Q7T0U6|SCM1B_XENLA Calcium-binding mitochondrial carrier protein SCaMC-1-B OS=Xenopus laevis GN=slc25a24-b PE=2 SV=1 Back     alignment and function description
>sp|Q7ZY36|SCM1A_XENLA Calcium-binding mitochondrial carrier protein SCaMC-1-A OS=Xenopus laevis GN=slc25a24-a PE=2 SV=2 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query293
225449356346 PREDICTED: mitochondrial substrate carri 0.914 0.774 0.808 1e-119
296086165277 unnamed protein product [Vitis vinifera] 0.904 0.956 0.813 1e-119
449464462348 PREDICTED: mitochondrial substrate carri 0.918 0.772 0.778 1e-112
224109442337 predicted protein [Populus trichocarpa] 0.877 0.762 0.783 1e-112
449448592349 PREDICTED: mitochondrial substrate carri 0.914 0.767 0.754 1e-111
449516015349 PREDICTED: mitochondrial substrate carri 0.914 0.767 0.750 1e-110
224101051337 predicted protein [Populus trichocarpa] 0.877 0.762 0.772 1e-110
118481007267 unknown [Populus trichocarpa] 0.870 0.955 0.777 1e-110
225440510336 PREDICTED: mitochondrial substrate carri 0.883 0.770 0.744 1e-107
255566518248 Mitochondrial deoxynucleotide carrier, p 0.839 0.991 0.759 1e-106
>gi|225449356|ref|XP_002282149.1| PREDICTED: mitochondrial substrate carrier family protein B isoform 1 [Vitis vinifera] Back     alignment and taxonomy information
 Score =  433 bits (1113), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 219/271 (80%), Positives = 235/271 (86%), Gaps = 3/271 (1%)

Query: 1   MQTEARVGVVVEGGQRGLSSGNGSVSVDKIT--LQQQQKQMLQNQSQIGTISQLLAGGVA 58
           MQTEARVGVVVEGGQR L+SG+G V+VD     L QQQK  L  QSQIGTI QLLAGG+A
Sbjct: 1   MQTEARVGVVVEGGQRALNSGHGGVAVDGTARKLAQQQKS-LHQQSQIGTIPQLLAGGIA 59

Query: 59  GALSKTCTAPLARLTILFQVQGMHSDTATLRKASIWREASRIISEEGFRAFWKGNLVTIA 118
           GALSKTCTAPLARLTILFQVQGMHSD ATL KASIW+EASRII EEGFRAFWKGNLVTIA
Sbjct: 60  GALSKTCTAPLARLTILFQVQGMHSDVATLTKASIWQEASRIIGEEGFRAFWKGNLVTIA 119

Query: 119 HRLPYSSVNFYAYEHYKKLLHAIPVVESQGENMSSDLFVHFVSGGLAGITAASVTYPLDL 178
           HRLPYSSV+FYAYE YK +LH +P +ES   N S+DL VHFV+GGLAG+TAAS TYPLDL
Sbjct: 120 HRLPYSSVSFYAYERYKNILHLVPGLESHKRNTSADLGVHFVAGGLAGLTAASATYPLDL 179

Query: 179 VRTRLAAQTNVIYYRGICHALQTICRDEGIWGLYKGLGATLLGVGPSIAISFSVYETLRS 238
           VRTRLAAQT VIYYRGI H LQTI R+EGIWGLYKGLGATLLGVGPSIAI+FSVYETLRS
Sbjct: 180 VRTRLAAQTKVIYYRGIGHTLQTIVREEGIWGLYKGLGATLLGVGPSIAINFSVYETLRS 239

Query: 239 FWQSRRQNDSPVLVSLACGSLSGIASSTAVY 269
            W S+R NDS VLVSL CGSLSGIASSTA +
Sbjct: 240 SWHSQRPNDSTVLVSLTCGSLSGIASSTATF 270

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|296086165|emb|CBI31606.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|449464462|ref|XP_004149948.1| PREDICTED: mitochondrial substrate carrier family protein B-like [Cucumis sativus] gi|449513191|ref|XP_004164257.1| PREDICTED: mitochondrial substrate carrier family protein B-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|224109442|ref|XP_002315196.1| predicted protein [Populus trichocarpa] gi|222864236|gb|EEF01367.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|449448592|ref|XP_004142050.1| PREDICTED: mitochondrial substrate carrier family protein B-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|449516015|ref|XP_004165043.1| PREDICTED: mitochondrial substrate carrier family protein B-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|224101051|ref|XP_002312122.1| predicted protein [Populus trichocarpa] gi|222851942|gb|EEE89489.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|118481007|gb|ABK92457.1| unknown [Populus trichocarpa] Back     alignment and taxonomy information
>gi|225440510|ref|XP_002272651.1| PREDICTED: mitochondrial substrate carrier family protein B [Vitis vinifera] gi|297740295|emb|CBI30477.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|255566518|ref|XP_002524244.1| Mitochondrial deoxynucleotide carrier, putative [Ricinus communis] gi|223536521|gb|EEF38168.1| Mitochondrial deoxynucleotide carrier, putative [Ricinus communis] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query293
TAIR|locus:2078951332 AT3G55640 [Arabidopsis thalian 0.764 0.674 0.758 6.7e-88
TAIR|locus:2084460365 AT3G53940 [Arabidopsis thalian 0.761 0.610 0.717 3.8e-85
TAIR|locus:2065598337 AT2G37890 [Arabidopsis thalian 0.764 0.664 0.674 1.1e-78
UNIPROTKB|Q6NUK1477 SLC25A24 "Calcium-binding mito 0.696 0.427 0.403 6.5e-35
DICTYBASE|DDB_G0285599434 mcfB "calcium-dependent mitoch 0.716 0.483 0.411 3.6e-34
UNIPROTKB|F6Q4L6416 SLC25A24 "Uncharacterized prot 0.696 0.490 0.399 4.6e-34
UNIPROTKB|F1PEX8397 SLC25A24 "Uncharacterized prot 0.696 0.513 0.394 5.8e-34
MGI|MGI:1917160475 Slc25a24 "solute carrier famil 0.689 0.425 0.399 1.5e-33
UNIPROTKB|A5PJZ1477 SLC25A24 "Calcium-binding mito 0.696 0.427 0.399 2e-33
RGD|1311982475 Slc25a24 "solute carrier famil 0.689 0.425 0.394 5.2e-33
TAIR|locus:2078951 AT3G55640 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 878 (314.1 bits), Expect = 6.7e-88, P = 6.7e-88
 Identities = 170/224 (75%), Positives = 196/224 (87%)

Query:    46 IGTISQLLAGGVAGALSKTCTAPLARLTILFQVQGMHSDTATLRKASIWREASRIISEEG 105
             I + SQLLAGG+AGA SKTCTAPL+RLTILFQVQGMH++ A LRK SI  EASRI++EEG
Sbjct:    32 IESASQLLAGGLAGAFSKTCTAPLSRLTILFQVQGMHTNAAALRKPSILHEASRILNEEG 91

Query:   106 FRAFWKGNLVTIAHRLPYSSVNFYAYEHYKKLLHAIPVVESQGENMSSDLFVHFVSGGLA 165
              +AFWKGNLVTIAHRLPYSSVNFYAYEHYKK ++ +  +E+  E +SS+LFVHFV+GGLA
Sbjct:    92 LKAFWKGNLVTIAHRLPYSSVNFYAYEHYKKFMYMVTGMENHKEGISSNLFVHFVAGGLA 151

Query:   166 GITAASVTYPLDLVRTRLAAQTNVIYYRGICHALQTICRDEGIWGLYKGLGATLLGVGPS 225
             GITAAS TYPLDLVRTRLAAQT VIYY GI H L++I  DEGI GLYKGLG TL+GVGPS
Sbjct:   152 GITAASATYPLDLVRTRLAAQTKVIYYSGIWHTLRSITTDEGILGLYKGLGTTLVGVGPS 211

Query:   226 IAISFSVYETLRSFWQSRRQNDSPVLVSLACGSLSGIASSTAVY 269
             IAISFSVYE+LRS+W+S R +DSP++VSLACGSLSGIASSTA +
Sbjct:   212 IAISFSVYESLRSYWRSTRPHDSPIMVSLACGSLSGIASSTATF 255
GO:0005215 "transporter activity" evidence=IEA;ISS
GO:0005739 "mitochondrion" evidence=ISM
GO:0005743 "mitochondrial inner membrane" evidence=IEA;ISS
GO:0006810 "transport" evidence=IEA;ISS
GO:0006839 "mitochondrial transport" evidence=ISS
GO:0055085 "transmembrane transport" evidence=IEA
GO:0005886 "plasma membrane" evidence=IDA
TAIR|locus:2084460 AT3G53940 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2065598 AT2G37890 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
UNIPROTKB|Q6NUK1 SLC25A24 "Calcium-binding mitochondrial carrier protein SCaMC-1" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
DICTYBASE|DDB_G0285599 mcfB "calcium-dependent mitochondrial substrate carrier" [Dictyostelium discoideum (taxid:44689)] Back     alignment and assigned GO terms
UNIPROTKB|F6Q4L6 SLC25A24 "Uncharacterized protein" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
UNIPROTKB|F1PEX8 SLC25A24 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
MGI|MGI:1917160 Slc25a24 "solute carrier family 25 (mitochondrial carrier, phosphate carrier), member 24" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
UNIPROTKB|A5PJZ1 SLC25A24 "Calcium-binding mitochondrial carrier protein SCaMC-1" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
RGD|1311982 Slc25a24 "solute carrier family 25 (mitochondrial carrier, phosphate carrier), member 24" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query293
pfam0015396 pfam00153, Mito_carr, Mitochondrial carrier protei 2e-25
PTZ00169300 PTZ00169, PTZ00169, ADP/ATP transporter on adenyla 4e-21
pfam0015396 pfam00153, Mito_carr, Mitochondrial carrier protei 3e-19
PTZ00169300 PTZ00169, PTZ00169, ADP/ATP transporter on adenyla 3e-07
PTZ00168 259 PTZ00168, PTZ00168, mitochondrial carrier protein; 8e-06
PTZ00168259 PTZ00168, PTZ00168, mitochondrial carrier protein; 0.003
>gnl|CDD|215754 pfam00153, Mito_carr, Mitochondrial carrier protein Back     alignment and domain information 
 Score = 96.6 bits (241), Expect = 2e-25
 Identities = 40/91 (43%), Positives = 54/91 (59%), Gaps = 2/91 (2%)

Query: 155 LFVHFVSGGLAGITAASVTYPLDLVRTRLAAQTNV--IYYRGICHALQTICRDEGIWGLY 212
                ++GG+AG  AA+VTYPLD+V+TRL +        Y+GI    + I ++EGI GLY
Sbjct: 5   FLASLLAGGIAGAIAATVTYPLDVVKTRLQSSAAGGSRKYKGILDCFKKIYKEEGIRGLY 64

Query: 213 KGLGATLLGVGPSIAISFSVYETLRSFWQSR 243
           KGL   LL V P+ AI F  YETL+     +
Sbjct: 65  KGLLPNLLRVAPAAAIYFGTYETLKKLLLKK 95

Length = 96
>gnl|CDD|240302 PTZ00169, PTZ00169, ADP/ATP transporter on adenylate translocase; Provisional Back     alignment and domain information
>gnl|CDD|215754 pfam00153, Mito_carr, Mitochondrial carrier protein Back     alignment and domain information
>gnl|CDD|240302 PTZ00169, PTZ00169, ADP/ATP transporter on adenylate translocase; Provisional Back     alignment and domain information
>gnl|CDD|185494 PTZ00168, PTZ00168, mitochondrial carrier protein; Provisional Back     alignment and domain information
>gnl|CDD|185494 PTZ00168, PTZ00168, mitochondrial carrier protein; Provisional Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 293
KOG0752320 consensus Mitochondrial solute carrier protein [En 100.0
KOG0764299 consensus Mitochondrial FAD carrier protein [Energ 100.0
PTZ00169300 ADP/ATP transporter on adenylate translocase; Prov 100.0
KOG0752320 consensus Mitochondrial solute carrier protein [En 100.0
KOG0753317 consensus Mitochondrial fatty acid anion carrier p 100.0
KOG0754294 consensus Mitochondrial oxodicarboxylate carrier p 100.0
KOG0764299 consensus Mitochondrial FAD carrier protein [Energ 100.0
KOG0758297 consensus Mitochondrial carnitine-acylcarnitine ca 100.0
KOG0760302 consensus Mitochondrial carrier protein MRS3/4 [En 100.0
PTZ00168259 mitochondrial carrier protein; Provisional 100.0
KOG0762311 consensus Mitochondrial carrier protein [Energy pr 100.0
KOG0753317 consensus Mitochondrial fatty acid anion carrier p 100.0
PTZ00169300 ADP/ATP transporter on adenylate translocase; Prov 100.0
KOG0757319 consensus Mitochondrial carrier protein - Rim2p/Mr 100.0
KOG0759286 consensus Mitochondrial oxoglutarate/malate carrie 100.0
KOG0757319 consensus Mitochondrial carrier protein - Rim2p/Mr 100.0
KOG0758297 consensus Mitochondrial carnitine-acylcarnitine ca 100.0
KOG0761361 consensus Mitochondrial carrier protein CGI-69 [En 100.0
KOG0768323 consensus Mitochondrial carrier protein PET8 [Ener 100.0
KOG0760302 consensus Mitochondrial carrier protein MRS3/4 [En 100.0
KOG0770353 consensus Predicted mitochondrial carrier protein 100.0
KOG0766297 consensus Predicted mitochondrial carrier protein 100.0
KOG0759286 consensus Mitochondrial oxoglutarate/malate carrie 100.0
PTZ00168259 mitochondrial carrier protein; Provisional 100.0
KOG0762311 consensus Mitochondrial carrier protein [Energy pr 100.0
KOG0768323 consensus Mitochondrial carrier protein PET8 [Ener 100.0
KOG0751 694 consensus Mitochondrial aspartate/glutamate carrie 100.0
KOG0754294 consensus Mitochondrial oxodicarboxylate carrier p 100.0
KOG0761361 consensus Mitochondrial carrier protein CGI-69 [En 100.0
KOG0765333 consensus Predicted mitochondrial carrier protein 100.0
KOG0769308 consensus Predicted mitochondrial carrier protein 100.0
KOG0749298 consensus Mitochondrial ADP/ATP carrier proteins [ 100.0
KOG0755320 consensus Mitochondrial oxaloacetate carrier prote 100.0
KOG0751694 consensus Mitochondrial aspartate/glutamate carrie 100.0
KOG0749298 consensus Mitochondrial ADP/ATP carrier proteins [ 100.0
KOG0765333 consensus Predicted mitochondrial carrier protein 100.0
KOG0763301 consensus Mitochondrial ornithine transporter [Ene 100.0
KOG0750304 consensus Mitochondrial solute carrier protein [En 100.0
KOG0036463 consensus Predicted mitochondrial carrier protein 100.0
KOG0756299 consensus Mitochondrial tricarboxylate/dicarboxyla 100.0
KOG0036463 consensus Predicted mitochondrial carrier protein 100.0
KOG0756299 consensus Mitochondrial tricarboxylate/dicarboxyla 100.0
KOG0767333 consensus Mitochondrial phosphate carrier protein 99.97
KOG0763301 consensus Mitochondrial ornithine transporter [Ene 99.97
KOG0766297 consensus Predicted mitochondrial carrier protein 99.97
KOG0769308 consensus Predicted mitochondrial carrier protein 99.97
KOG0770353 consensus Predicted mitochondrial carrier protein 99.97
KOG0755320 consensus Mitochondrial oxaloacetate carrier prote 99.97
KOG0750304 consensus Mitochondrial solute carrier protein [En 99.97
KOG0767333 consensus Mitochondrial phosphate carrier protein 99.95
KOG2745321 consensus Mitochondrial carrier protein [General f 99.9
KOG1519297 consensus Predicted mitochondrial carrier protein 99.89
KOG1519297 consensus Predicted mitochondrial carrier protein 99.83
PF0015395 Mito_carr: Mitochondrial carrier protein; InterPro 99.78
PF0015395 Mito_carr: Mitochondrial carrier protein; InterPro 99.73
KOG2745321 consensus Mitochondrial carrier protein [General f 99.66
KOG2954427 consensus Mitochondrial carrier protein [General f 99.54
KOG2954 427 consensus Mitochondrial carrier protein [General f 98.64
>KOG0752 consensus Mitochondrial solute carrier protein [Energy production and conversion] Back     alignment and domain information 
Probab=100.00  E-value=4.3e-48  Score=327.06  Aligned_cols=231  Identities=44%  Similarity=0.721  Sum_probs=206.5

Q ss_pred             chhHHHHHHHHHHHHHHHHhhcchHHHHHHHHhcCCCCCccccccccHHHHHHHHHHhhhhhhhhcchhhhhhcccchhh
Q 022741           46 IGTISQLLAGGVAGALSKTCTAPLARLTILFQVQGMHSDTATLRKASIWREASRIISEEGFRAFWKGNLVTIAHRLPYSS  125 (293)
Q Consensus        46 ~~~~~~~~~g~~a~~~~~~i~~Pld~ik~~~q~~~~~~~~~~~~~~~~~~~~~~i~~~~G~~glyrG~~~~~~~~~~~~~  125 (293)
                      ......+++|++||+++..++.|||+||+|+|++.++  ....++.|..+.+++|+++||++|||||-.+++++.+|+.+
T Consensus        25 ~~~~~~llAGgvAGavsrt~~APLd~iKIlfQ~~~~~--~~~~k~~g~~~~~~~I~~eEG~~g~wkGn~~~~~r~~pY~a  102 (320)
T KOG0752|consen   25 ITGAKSLLAGGVAGAVSRTVTAPLDRIKILFQVQVEP--SKTSKYPGVIQAFKSIYREEGLRGFWKGNGPAQIRIIPYGA  102 (320)
T ss_pred             HHHHHHHhcchHHHHHHHHhcCchhHceEEEEecccc--ccccccccHHHHHHHHHHHhchhhhhcCcccceeeeeecch
Confidence            3667789999999999999999999999999999865  33567889999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhcCCcccccCCCCchhHHHHHHhhHHHHHhHhhhcccHHHHHHHHHhccCCcccCcHHHHHHHHHHh
Q 022741          126 VNFYAYEHYKKLLHAIPVVESQGENMSSDLFVHFVSGGLAGITAASVTYPLDLVRTRLAAQTNVIYYRGICHALQTICRD  205 (293)
Q Consensus       126 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~Pl~~ik~r~q~~~~~~~~~~~~~~~~~i~~~  205 (293)
                      ++|..||.+++......      +....+...++++|++||.++++++||+|++|+|+..+++...|+++.+++++|+++
T Consensus       103 vqf~aye~~k~~~~~~~------~~~~~~~~~~l~aGalAG~~a~~~tyPLDlvRtRLa~q~~~~~y~~l~~a~~~I~~~  176 (320)
T KOG0752|consen  103 VQFSAYEQYKKLVLGVD------PNGSLSPLVRLVAGALAGMTATLATYPLDLLRTRLAVQGELKVYRGLLHAFKTIYRE  176 (320)
T ss_pred             hhhhHHHHhhhhhhccC------cccccchhHHHHHHHHHHHHHHHhcCcHHHhhhheeeecccccCCcHHHHHHHHHHh
Confidence            99999999998643211      111567889999999999999999999999999999998777899999999999999


Q ss_pred             hChhhcccchhHhhhhhhhhHHHHHHHHHHHHHH-HhhcCC-CCChhHHHHHHHHHHHHHHhhhhcCChhhHHHHHhhhh
Q 022741          206 EGIWGLYKGLGATLLGVGPSIAISFSVYETLRSF-WQSRRQ-NDSPVLVSLACGSLSGIASSTAVYRAFDAETEDVGLAL  283 (293)
Q Consensus       206 ~G~~g~y~G~~~~~~~~~~~~~~~~~~ye~~~~~-~~~~~~-~~~~~~~~~~~g~~ag~~~~~~~~~P~dvv~tr~~~~~  283 (293)
                      ||++|||||+.|+++..+|+.++.|..||.+|++ ..+..+ ++.+.+..++||++||+++..++| |+|+||+|||...
T Consensus       177 eGi~gfYrGl~ptllgi~Pyag~~F~~Yd~lk~~~~~~~~~~~~~~~~~~l~~GalAG~~aqti~y-PlD~vRrrmQ~~~  255 (320)
T KOG0752|consen  177 EGIRGFYRGLGPTLLGIAPYAGINFFAYDTLKKWQYLKSSGNKELSNFERLLCGALAGAVAQTITY-PLDTVRRRMQLGG  255 (320)
T ss_pred             cchhhhhcCcchhhheehhhhhhHHHHHHHHHHhhcccccccchhhhHHHHHHHHHHHHHHhhhcc-cHHHHHHHHhccC
Confidence            9999999999999999999999999999999995 333333 456789999999999999999999 9999999999766


Q ss_pred             hh
Q 022741          284 HQ  285 (293)
Q Consensus       284 ~~  285 (293)
                      .+
T Consensus       256 ~~  257 (320)
T KOG0752|consen  256 LK  257 (320)
T ss_pred             cc
Confidence            54

>KOG0764 consensus Mitochondrial FAD carrier protein [Energy production and conversion] Back     alignment and domain information
>PTZ00169 ADP/ATP transporter on adenylate translocase; Provisional Back     alignment and domain information
>KOG0752 consensus Mitochondrial solute carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0753 consensus Mitochondrial fatty acid anion carrier protein/Uncoupling protein [Energy production and conversion] Back     alignment and domain information
>KOG0754 consensus Mitochondrial oxodicarboxylate carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0764 consensus Mitochondrial FAD carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0758 consensus Mitochondrial carnitine-acylcarnitine carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0760 consensus Mitochondrial carrier protein MRS3/4 [Energy production and conversion] Back     alignment and domain information
>PTZ00168 mitochondrial carrier protein; Provisional Back     alignment and domain information
>KOG0762 consensus Mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0753 consensus Mitochondrial fatty acid anion carrier protein/Uncoupling protein [Energy production and conversion] Back     alignment and domain information
>PTZ00169 ADP/ATP transporter on adenylate translocase; Provisional Back     alignment and domain information
>KOG0757 consensus Mitochondrial carrier protein - Rim2p/Mrs12p [Energy production and conversion] Back     alignment and domain information
>KOG0759 consensus Mitochondrial oxoglutarate/malate carrier proteins [Energy production and conversion] Back     alignment and domain information
>KOG0757 consensus Mitochondrial carrier protein - Rim2p/Mrs12p [Energy production and conversion] Back     alignment and domain information
>KOG0758 consensus Mitochondrial carnitine-acylcarnitine carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0761 consensus Mitochondrial carrier protein CGI-69 [Energy production and conversion] Back     alignment and domain information
>KOG0768 consensus Mitochondrial carrier protein PET8 [Energy production and conversion] Back     alignment and domain information
>KOG0760 consensus Mitochondrial carrier protein MRS3/4 [Energy production and conversion] Back     alignment and domain information
>KOG0770 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0766 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0759 consensus Mitochondrial oxoglutarate/malate carrier proteins [Energy production and conversion] Back     alignment and domain information
>PTZ00168 mitochondrial carrier protein; Provisional Back     alignment and domain information
>KOG0762 consensus Mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0768 consensus Mitochondrial carrier protein PET8 [Energy production and conversion] Back     alignment and domain information
>KOG0751 consensus Mitochondrial aspartate/glutamate carrier protein Aralar/Citrin (contains EF-hand Ca2+-binding domains) [Energy production and conversion] Back     alignment and domain information
>KOG0754 consensus Mitochondrial oxodicarboxylate carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0761 consensus Mitochondrial carrier protein CGI-69 [Energy production and conversion] Back     alignment and domain information
>KOG0765 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0769 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0749 consensus Mitochondrial ADP/ATP carrier proteins [Energy production and conversion] Back     alignment and domain information
>KOG0755 consensus Mitochondrial oxaloacetate carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0751 consensus Mitochondrial aspartate/glutamate carrier protein Aralar/Citrin (contains EF-hand Ca2+-binding domains) [Energy production and conversion] Back     alignment and domain information
>KOG0749 consensus Mitochondrial ADP/ATP carrier proteins [Energy production and conversion] Back     alignment and domain information
>KOG0765 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0763 consensus Mitochondrial ornithine transporter [Energy production and conversion] Back     alignment and domain information
>KOG0750 consensus Mitochondrial solute carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0036 consensus Predicted mitochondrial carrier protein [Nucleotide transport and metabolism] Back     alignment and domain information
>KOG0756 consensus Mitochondrial tricarboxylate/dicarboxylate carrier proteins [Energy production and conversion] Back     alignment and domain information
>KOG0036 consensus Predicted mitochondrial carrier protein [Nucleotide transport and metabolism] Back     alignment and domain information
>KOG0756 consensus Mitochondrial tricarboxylate/dicarboxylate carrier proteins [Energy production and conversion] Back     alignment and domain information
>KOG0767 consensus Mitochondrial phosphate carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0763 consensus Mitochondrial ornithine transporter [Energy production and conversion] Back     alignment and domain information
>KOG0766 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0769 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0770 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0755 consensus Mitochondrial oxaloacetate carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0750 consensus Mitochondrial solute carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0767 consensus Mitochondrial phosphate carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG2745 consensus Mitochondrial carrier protein [General function prediction only] Back     alignment and domain information
>KOG1519 consensus Predicted mitochondrial carrier protein [General function prediction only] Back     alignment and domain information
>KOG1519 consensus Predicted mitochondrial carrier protein [General function prediction only] Back     alignment and domain information
>PF00153 Mito_carr: Mitochondrial carrier protein; InterPro: IPR018108 A variety of substrate carrier proteins that are involved in energy transfer are found in the inner mitochondrial membrane or integral to the membrane of other eukaryotic organelles such as the peroxisome [, , , , , ] Back     alignment and domain information
>PF00153 Mito_carr: Mitochondrial carrier protein; InterPro: IPR018108 A variety of substrate carrier proteins that are involved in energy transfer are found in the inner mitochondrial membrane or integral to the membrane of other eukaryotic organelles such as the peroxisome [, , , , , ] Back     alignment and domain information
>KOG2745 consensus Mitochondrial carrier protein [General function prediction only] Back     alignment and domain information
>KOG2954 consensus Mitochondrial carrier protein [General function prediction only] Back     alignment and domain information
>KOG2954 consensus Mitochondrial carrier protein [General function prediction only] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query293
1okc_A297 Structure Of Mitochondrial AdpATP CARRIER IN COMPLE 2e-22
2lck_A303 Structure Of The Mitochondrial Uncoupling Protein 2 2e-12
2lck_A 303 Structure Of The Mitochondrial Uncoupling Protein 2 3e-04
>pdb|1OKC|A Chain A, Structure Of Mitochondrial AdpATP CARRIER IN COMPLEX WITH Carboxyatractyloside Length = 297 Back     alignment and structure 
Iteration: 1

 Score =  102 bits (255), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 65/198 (32%), Positives = 98/198 (49%), Gaps = 16/198 (8%)
Query: 49  ISQLLAGGVAGALSKTCTAPLARLTILFQVQGMHSD-TATLRKASIWREASRIISEEGFR 107
           +   LAGGVA A+SKT  AP+ R+ +L QVQ      +A  +   I     RI  E+GF 
Sbjct: 8   LKDFLAGGVAAAISKTAVAPIERVKLLLQVQHASKQISAEKQYKGIIDCVVRIPKEQGFL 67
Query: 108 AFWKGNLVTIAHRLPYSSVNFYAYEHYKKLLHAIPVVESQGENMSSDLFVHF----VSGG 163
           +FW+GNL  +    P  ++NF   + YK++          G +     + +F     SGG
Sbjct: 68  SFWRGNLANVIRYFPTQALNFAFKDKYKQIFLG-------GVDRHKQFWRYFAGNLASGG 120
Query: 164 LAGITAASVTYPLDLVRTRLAAQTNV----IYYRGICHALQTICRDEGIWGLYKGLGATL 219
            AG T+    YPLD  RTRLAA          + G+ + +  I + +G+ GLY+G   ++
Sbjct: 121 AAGATSLCFVYPLDFARTRLAADVGKGAAQREFTGLGNCITKIFKSDGLRGLYQGFNVSV 180
Query: 220 LGVGPSIAISFSVYETLR 237
            G+    A  F VY+T +
Sbjct: 181 QGIIIYRAAYFGVYDTAK 198
>pdb|2LCK|A Chain A, Structure Of The Mitochondrial Uncoupling Protein 2 Determined By Nmr Molecular Fragment Replacement Length = 303 Back     alignment and structure
>pdb|2LCK|A Chain A, Structure Of The Mitochondrial Uncoupling Protein 2 Determined By Nmr Molecular Fragment Replacement Length = 303 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query293
1okc_A297 ADP, ATP carrier protein heart isoform T1; mitocho 4e-86
1okc_A297 ADP, ATP carrier protein heart isoform T1; mitocho 4e-42
1okc_A297 ADP, ATP carrier protein heart isoform T1; mitocho 1e-11
2lck_A303 Mitochondrial uncoupling protein 2; membrane prote 1e-33
2lck_A303 Mitochondrial uncoupling protein 2; membrane prote 6e-32
2lck_A 303 Mitochondrial uncoupling protein 2; membrane prote 3e-27
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 1e-06
>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Length = 297 Back     alignment and structure
 Score =  258 bits (662), Expect = 4e-86
 Identities = 66/233 (28%), Positives = 104/233 (44%), Gaps = 10/233 (4%)

Query: 42  NQSQIGTISQLLAGGVAGALSKTCTAPLARLTILFQVQGMHSDTATLRKA-SIWREASRI 100
           +   +  +   LAGGVA A+SKT  AP+ R+ +L QVQ      +  ++   I     RI
Sbjct: 1   SDQALSFLKDFLAGGVAAAISKTAVAPIERVKLLLQVQHASKQISAEKQYKGIIDCVVRI 60

Query: 101 ISEEGFRAFWKGNLVTIAHRLPYSSVNFYAYEHYKKLLHAIPVVESQGENMSSDLFVHFV 160
             E+GF +FW+GNL  +    P  ++NF   + YK++         Q          +  
Sbjct: 61  PKEQGFLSFWRGNLANVIRYFPTQALNFAFKDKYKQIFLGGVDRHKQFW---RYFAGNLA 117

Query: 161 SGGLAGITAASVTYPLDLVRTRLAAQTNVI----YYRGICHALQTICRDEGIWGLYKGLG 216
           SGG AG T+    YPLD  RTRLAA          + G+ + +  I + +G+ GLY+G  
Sbjct: 118 SGGAAGATSLCFVYPLDFARTRLAADVGKGAAQREFTGLGNCITKIFKSDGLRGLYQGFN 177

Query: 217 ATLLGVGPSIAISFSVYETLRSFWQSRRQNDSPVLVSLACGSLSGIASSTAVY 269
            ++ G+    A  F VY+T +         +  ++VS          +    Y
Sbjct: 178 VSVQGIIIYRAAYFGVYDTAKGMLP--DPKNVHIIVSWMIAQTVTAVAGLVSY 228
>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Length = 297 Back     alignment and structure
>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Length = 297 Back     alignment and structure
>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Length = 303 Back     alignment and structure
>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Length = 303 Back     alignment and structure
>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Length = 303 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query293
1okc_A297 ADP, ATP carrier protein heart isoform T1; mitocho 100.0
2lck_A303 Mitochondrial uncoupling protein 2; membrane prote 100.0
2lck_A303 Mitochondrial uncoupling protein 2; membrane prote 100.0
1okc_A297 ADP, ATP carrier protein heart isoform T1; mitocho 100.0
>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Back     alignment and structure
Probab=100.00  E-value=1.3e-45  Score=319.81  Aligned_cols=233  Identities=29%  Similarity=0.487  Sum_probs=200.1

Q ss_pred             cchhHHHHHHHHHHHHHHHHhhcchHHHHHHHHhcCCCC-CccccccccHHHHHHHHHHhhhhhhhhcchhhhhhcccch
Q 022741           45 QIGTISQLLAGGVAGALSKTCTAPLARLTILFQVQGMHS-DTATLRKASIWREASRIISEEGFRAFWKGNLVTIAHRLPY  123 (293)
Q Consensus        45 ~~~~~~~~~~g~~a~~~~~~i~~Pld~ik~~~q~~~~~~-~~~~~~~~~~~~~~~~i~~~~G~~glyrG~~~~~~~~~~~  123 (293)
                      +.+....+++|++||+++.+++||+|+||+|+|++.... ......|++.++++++++++||++|||||+.+++++.++.
T Consensus         4 ~~~~~~~~~aG~~ag~~~~~~~~Pld~vKtrlQ~~~~~~~~~~~~~~~~~~~~~~~i~~~eG~~glyrG~~~~l~~~~~~   83 (297)
T 1okc_A            4 ALSFLKDFLAGGVAAAISKTAVAPIERVKLLLQVQHASKQISAEKQYKGIIDCVVRIPKEQGFLSFWRGNLANVIRYFPT   83 (297)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHGGGCSSCCGGGSCCSHHHHHHHHHHHHCGGGGGTTTHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHhcccccccccccccccHHHHHHHHHhccchhheecccHHHHHHHHHH
Confidence            346678899999999999999999999999999986422 1224468999999999999999999999999999999999


Q ss_pred             hhHHHHHHHHHHHHHhcCCcccccCCCCchhHHHHHHhhHHHHHhHhhhcccHHHHHHHHHhccC----CcccCcHHHHH
Q 022741          124 SSVNFYAYEHYKKLLHAIPVVESQGENMSSDLFVHFVSGGLAGITAASVTYPLDLVRTRLAAQTN----VIYYRGICHAL  199 (293)
Q Consensus       124 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~Pl~~ik~r~q~~~~----~~~~~~~~~~~  199 (293)
                      .+++|.+||.+++.+.....   ...+...+....+++|++||++++++++|+|+||+|+|.+..    ...|+++++++
T Consensus        84 ~~~~f~~ye~~k~~~~~~~~---~~~~~~~~~~~~~~ag~~ag~~~~~~~~Pld~vktrlq~~~~~~~~~~~~~~~~~~~  160 (297)
T 1okc_A           84 QALNFAFKDKYKQIFLGGVD---RHKQFWRYFAGNLASGGAAGATSLCFVYPLDFARTRLAADVGKGAAQREFTGLGNCI  160 (297)
T ss_dssp             HHHHHHHHHHHHHHHHTTCC---TTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCSSTTTCSCSSHHHHH
T ss_pred             HHHHHHHHHHHHHHhccccC---cccchHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHhccccCCCcCcCCCCHHHHH
Confidence            99999999999996542111   011112345678999999999999999999999999999843    34689999999


Q ss_pred             HHHHHhhChhhcccchhHhhhhhhhhHHHHHHHHHHHHHHHhhcCCCCChhHHHHHHHHHHHHHHhhhhcCChhhHHHHH
Q 022741          200 QTICRDEGIWGLYKGLGATLLGVGPSIAISFSVYETLRSFWQSRRQNDSPVLVSLACGSLSGIASSTAVYRAFDAETEDV  279 (293)
Q Consensus       200 ~~i~~~~G~~g~y~G~~~~~~~~~~~~~~~~~~ye~~~~~~~~~~~~~~~~~~~~~~g~~ag~~~~~~~~~P~dvv~tr~  279 (293)
                      ++|+++||++|||||+.++++|.+|+++++|.+||.+|+.+.+.  .+.+.+..+++|+++|+++++++| |+||||+||
T Consensus       161 ~~i~~~eG~~glyrG~~~~l~~~~~~~~~~f~~ye~~k~~~~~~--~~~~~~~~~~~g~~ag~~a~~~t~-P~dvvktr~  237 (297)
T 1okc_A          161 TKIFKSDGLRGLYQGFNVSVQGIIIYRAAYFGVYDTAKGMLPDP--KNVHIIVSWMIAQTVTAVAGLVSY-PFDTVRRRM  237 (297)
T ss_dssp             HHHHHHHCHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHSSCGG--GCSCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHH
T ss_pred             HHHHHhccHHHhcCCchHHHHHHHHHHHHHHHHHHHHHHHhccC--CCccHHHHHHHHHHHHHHHHHhcC-hHHHHHHHH
Confidence            99999999999999999999999999999999999999976543  244577889999999999999997 999999999


Q ss_pred             hhhh
Q 022741          280 GLAL  283 (293)
Q Consensus       280 ~~~~  283 (293)
                      |...
T Consensus       238 q~~~  241 (297)
T 1okc_A          238 MMQS  241 (297)
T ss_dssp             HTTT
T ss_pred             hhcC
Confidence            9653
>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Back     alignment and structure
>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Back     alignment and structure
>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 293
d1okca_292 f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos ta 4e-23
d1okca_292 f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos ta 8e-17
>d1okca_ f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos taurus), heart isoform t1 [TaxId: 9913]} Length = 292 Back     information, alignment and structure

class: Membrane and cell surface proteins and peptides
fold: Mitochondrial carrier
superfamily: Mitochondrial carrier
family: Mitochondrial carrier
domain: ADP,ATP carrier protein
species: Cow (Bos taurus), heart isoform t1 [TaxId: 9913]

 Score = 94.4 bits (233), Expect = 4e-23
 Identities = 66/239 (27%), Positives = 103/239 (43%), Gaps = 10/239 (4%)

Query: 43  QSQIGTISQLLAGGVAGALSKTCTAPLARLTILFQVQGMHSDTATLRKA-SIWREASRII 101
              +  +   LAGGVA A+SKT  AP+ R+ +L QVQ      +  ++   I     RI 
Sbjct: 1   DQALSFLKDFLAGGVAAAISKTAVAPIERVKLLLQVQHASKQISAEKQYKGIIDCVVRIP 60

Query: 102 SEEGFRAFWKGNLVTIAHRLPYSSVNFYAYEHYKKLLHAIPVVESQGENMSSDLFVHFVS 161
            E+GF +FW+GNL  +    P  ++NF   + YK++         Q          +  S
Sbjct: 61  KEQGFLSFWRGNLANVIRYFPTQALNFAFKDKYKQIFLGGVDRHKQFWRY---FAGNLAS 117

Query: 162 GGLAGITAASVTYPLDLVRTRLAAQTNVIY----YRGICHALQTICRDEGIWGLYKGLGA 217
           GG AG T+    YPLD  RTRLAA          + G+ + +  I + +G+ GLY+G   
Sbjct: 118 GGAAGATSLCFVYPLDFARTRLAADVGKGAAQREFTGLGNCITKIFKSDGLRGLYQGFNV 177

Query: 218 TLLGVGPSIAISFSVYETLRSFWQSRRQNDSPVLVSLACGSLSGIASSTAVYRAFDAET 276
           ++ G+    A  F VY+T +         +  ++VS          +    Y       
Sbjct: 178 SVQGIIIYRAAYFGVYDTAKGMLP--DPKNVHIIVSWMIAQTVTAVAGLVSYPFDTVRR 234
>d1okca_ f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos taurus), heart isoform t1 [TaxId: 9913]} Length = 292 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query293
d1okca_292 ADP,ATP carrier protein {Cow (Bos taurus), heart i 100.0
d1okca_292 ADP,ATP carrier protein {Cow (Bos taurus), heart i 100.0
>d1okca_ f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos taurus), heart isoform t1 [TaxId: 9913]} Back     information, alignment and structure
class: Membrane and cell surface proteins and peptides
fold: Mitochondrial carrier
superfamily: Mitochondrial carrier
family: Mitochondrial carrier
domain: ADP,ATP carrier protein
species: Cow (Bos taurus), heart isoform t1 [TaxId: 9913]

Probab=100.00  E-value=1.8e-41  Score=291.00  Aligned_cols=233  Identities=29%  Similarity=0.483  Sum_probs=204.8

Q ss_pred             cchhHHHHHHHHHHHHHHHHhhcchHHHHHHHHhcCCCC-CccccccccHHHHHHHHHHhhhhhhhhcchhhhhhcccch
Q 022741           45 QIGTISQLLAGGVAGALSKTCTAPLARLTILFQVQGMHS-DTATLRKASIWREASRIISEEGFRAFWKGNLVTIAHRLPY  123 (293)
Q Consensus        45 ~~~~~~~~~~g~~a~~~~~~i~~Pld~ik~~~q~~~~~~-~~~~~~~~~~~~~~~~i~~~~G~~glyrG~~~~~~~~~~~  123 (293)
                      ..++.+.+++|++|++++.+++||||+||+|+|++.... ......+++.++++++++++||+++||||+.+.+++..+.
T Consensus         3 ~~~~~~~~laG~~a~~i~~~~~~Pld~iK~r~Q~~~~~~~~~~~~~~~~~~~~~~~i~~~~G~~~ly~G~~~~l~~~~~~   82 (292)
T d1okca_           3 ALSFLKDFLAGGVAAAISKTAVAPIERVKLLLQVQHASKQISAEKQYKGIIDCVVRIPKEQGFLSFWRGNLANVIRYFPT   82 (292)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHGGGCSSCCGGGSCCSHHHHHHHHHHHHCGGGGGTTTHHHHHHHHHH
T ss_pred             CchHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhcCCCCCCCCcccccCCHHHHHHHHHHhhhhhhhhhccchhhhhhhcc
Confidence            467889999999999999999999999999999987543 2345668999999999999999999999999999999999


Q ss_pred             hhHHHHHHHHHHHHHhcCCcccccCCCCchhHHHHHHhhHHHHHhHhhhcccHHHHHHHHHhccC----CcccCcHHHHH
Q 022741          124 SSVNFYAYEHYKKLLHAIPVVESQGENMSSDLFVHFVSGGLAGITAASVTYPLDLVRTRLAAQTN----VIYYRGICHAL  199 (293)
Q Consensus       124 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~Pl~~ik~r~q~~~~----~~~~~~~~~~~  199 (293)
                      .+++|.+++.+++.+.+....   .++........+++|.+|++++.++++|+|++|+|+|.+..    ...+.+..+++
T Consensus        83 ~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~a~~~~~~~~~P~~~ik~r~~~~~~~~~~~~~~~~~~~~~  159 (292)
T d1okca_          83 QALNFAFKDKYKQIFLGGVDR---HKQFWRYFAGNLASGGAAGATSLCFVYPLDFARTRLAADVGKGAAQREFTGLGNCI  159 (292)
T ss_dssp             HHHHHHHHHHHHHHHHTTCCT---TTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCSSTTTCSCSSHHHHH
T ss_pred             cchhHHHHHHHHHHHhccccc---ccccchhhhhhhhhhhhhhhhHHhhhhhhhhhheeeeccccccccccccccHHHHH
Confidence            999999999999998865331   22333455677889999999999999999999999999843    34678999999


Q ss_pred             HHHHHhhChhhcccchhHhhhhhhhhHHHHHHHHHHHHHHHhhcCCCCChhHHHHHHHHHHHHHHhhhhcCChhhHHHHH
Q 022741          200 QTICRDEGIWGLYKGLGATLLGVGPSIAISFSVYETLRSFWQSRRQNDSPVLVSLACGSLSGIASSTAVYRAFDAETEDV  279 (293)
Q Consensus       200 ~~i~~~~G~~g~y~G~~~~~~~~~~~~~~~~~~ye~~~~~~~~~~~~~~~~~~~~~~g~~ag~~~~~~~~~P~dvv~tr~  279 (293)
                      ++++++||+++||+|+.+++++++++++++|..||.+|+.+.+  ....+....+++|.++++++++++| |+||||+||
T Consensus       160 ~~~~~~~G~~~l~~G~~~~~~~~~~~~~~~~~~~~~~k~~~~~--~~~~~~~~~~~~~~~~~~~a~~~t~-P~dvvktR~  236 (292)
T d1okca_         160 TKIFKSDGLRGLYQGFNVSVQGIIIYRAAYFGVYDTAKGMLPD--PKNVHIIVSWMIAQTVTAVAGLVSY-PFDTVRRRM  236 (292)
T ss_dssp             HHHHHHHCHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHSSCG--GGCSCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHH
T ss_pred             HHhhhccchhhhhccccccccceehHhhhhhhhccchhhhccc--ccccchHHHHHHHHHHHHHHhhccc-cHHHHHHHH
Confidence            9999999999999999999999999999999999999987644  3445678889999999999999997 999999999


Q ss_pred             hhhh
Q 022741          280 GLAL  283 (293)
Q Consensus       280 ~~~~  283 (293)
                      |...
T Consensus       237 q~~~  240 (292)
T d1okca_         237 MMQS  240 (292)
T ss_dssp             HTTT
T ss_pred             HhcC
Confidence            9643
>d1okca_ f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos taurus), heart isoform t1 [TaxId: 9913]} Back     information, alignment and structure