Citrus Sinensis ID: 022795

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290--
MRANKAMEKQQNSLPLHVSHVKKSSLIINRSLVLLHFTSLAFLVYYRVSYFFQVSNARAAPLLPWLLVFAAELLLSFQWLLGIAYRWRPISRTVFPERLPEADQLPGIDVFICTADPTKEPTVEVMNTVLSAMALDYPPEKLHVYLSDDGGASITLLGMREAWKFARSWLPFCKRFGIKTICPEAYFSDPENGDGDSGNAEFIVEREKIKEKYTEFKERVTRAIEKWGLENEGISRSRDHPSVVEVIGENDNEAANEEQQMNNKMPLLVYVAREKRPSHPHNFKAGALNVLV
ccccHHHHHcccccccEEEEccccHHHHHHHHHHHHHHHHHHHHHHHHHEEccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccEEEEEEcccccccHHHHHHHHHHHHcccccccccEEEEEccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccEEEEcccccccHHHHHHccccccEEEEEEcccccccccccccccccccc
ccccccccccccccccccccccHHHHcHHHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHHHHHccccccccccccHHHHcccccccccEEEEEcccccccccEEEHHHHHHHHHccccccEEEEEEccccHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHcccccccccccHHHHHHHHHHHHHHHHcEEEEcccccccEccccccccccccccEEEEEEccccccccccccccccccEEEEEEcccccccccccHHcHHHHcc
MRANKAMEkqqnslplhvshvkksslIINRSLVLLHFTSLAFLVYYRVSYFFQvsnaraaplLPWLLVFAAELLLSFQWLLGIayrwrpisrtvfperlpeadqlpgidvfictadptkeptVEVMNTVLSAmaldyppeklhvylsddggasITLLGMREAWKFARSwlpfckrfgikticpeayfsdpengdgdsgnaEFIVEREKIKEKYTEFKERVTRAIEKWglenegisrsrdhpsvvevigendneaANEEQQMNNKMPLLVYVArekrpshphnfkagalnvlv
mrankamekqqnslplhvSHVKKSSLIINRSLVLLHFTSLAFLVYYRVSYFFQVSNARAAPLLPWLLVFAAELLLSFQWLLGIAYRWRPISRTVFPERLPEADQLPGIDVFICTADPTKEPTVEVMNTVLSAMALDYPPEKLHVYLSDDGGASITLLGMREAWKFARSWLPFCKRFGIKTICPEAYFsdpengdgdsgnaEFIVEREKIKEKYTEFKERVTRAiekwglenegisrsrdhpsvVEVIGENDNEAANEEQQMNNKMPLLVYVAREkrpshphnfkagalnvlv
MRANKAMEKQQNSLPLHVSHVKKSSLIINRSLVLLHFTSLAFLVYYRVSYFFQVSNARAAPLLPWLLVFAAELLLSFQWLLGIAYRWRPISRTVFPERLPEADQLPGIDVFICTADPTKEPTVEVMNTVLSAMALDYPPEKLHVYLSDDGGASITLLGMREAWKFARSWLPFCKRFGIKTICPEAYFSDPENGDGDSGNAEFIVEREKIKEKYTEFKERVTRAIEKWGLENEGISRSRDHPSVVEVIGendneaaneeqqmnnKMPLLVYVAREKRPSHPHNFKAGALNVLV
*******************HVKKSSLIINRSLVLLHFTSLAFLVYYRVSYFFQVSNARAAPLLPWLLVFAAELLLSFQWLLGIAYRWRPISRTVFPERLPEADQLPGIDVFICTADPTKEPTVEVMNTVLSAMALDYPPEKLHVYLSDDGGASITLLGMREAWKFARSWLPFCKRFGIKTICPEAYFS*************FIVEREKIKEKYTEFKERVTRAIEKWGL**************************************LVYV*********************
*****************VSHVKKSSLIINRSLVLLHFTSLAFLVYYRVSYFFQVSNARAAPLLPWLLVFAAELLLSFQWLLGIAYRWRPISRTVFPERLPEADQLPGIDVFICTADPTKEPTVEVMNTVLSAMALDYPPEKLHVYLSDDGGASITLLGMREAWKFARSWLPFCKRFGIKTICPEAYFSDPEN*DGDSGNAEFIVEREKIKEKYTEFKERVTRAIEKW********************************QMNNKMPLLVYVAREKRPSHPHNFKAGALNVLV
************SLPLHVSHVKKSSLIINRSLVLLHFTSLAFLVYYRVSYFFQVSNARAAPLLPWLLVFAAELLLSFQWLLGIAYRWRPISRTVFPERLPEADQLPGIDVFICTADPTKEPTVEVMNTVLSAMALDYPPEKLHVYLSDDGGASITLLGMREAWKFARSWLPFCKRFGIKTICPEAYFSDPENGDGDSGNAEFIVEREKIKEKYTEFKERVTRAIEKWGLENEGISRSRDHPSVVEVIGENDNEAANEEQQMNNKMPLLVYVAREKRPSHPHNFKAGALNVLV
*********QQNSLPLHVSHVKKSSLIINRSLVLLHFTSLAFLVYYRVSYFFQVSNARAAPLLPWLLVFAAELLLSFQWLLGIAYRWRPISRTVFPERLPEADQLPGIDVFICTADPTKEPTVEVMNTVLSAMALDYPPEKLHVYLSDDGGASITLLGMREAWKFARSWLPFCKRFGIKTICPEAYFSDPENGDGDSGNAEFIVEREKIKEKYTEFKERVTRAIEKWGLENEGISRSRDHPSVVEVIGENDNEAANEEQQMNNKMPLLVYVAREKRPSHPHNF**G******
iiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
oooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
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MRANKAMEKQQNSLPLHVSHVKKSSLIINRSLVLLHFTSLAFLVYYRVSYFFQVSNARAAPLLPWLLVFAAELLLSFQWLLGIAYRWRPISRTVFPERLPEADQLPGIDVFICTADPTKEPTVEVMNTVLSAMALDYPPEKLHVYLSDDGGASITLLGMREAWKFARSWLPFCKRFGIKTICPEAYFSDPENGDGDSGNAEFIVExxxxxxxxxxxxxxxxxxxxxWGLENEGISRSRDHPSVVEVIGENDNEAANEEQQMNNKMPLLVYVAREKRPSHPHNFKAGALNVLV
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query292 2.2.26 [Sep-21-2011]
Q651X6 728 Cellulose synthase-like p no no 0.835 0.335 0.399 4e-47
Q651X7 737 Cellulose synthase-like p no no 0.835 0.331 0.399 4e-47
Q0DXZ1 745 Cellulose synthase-like p no no 0.746 0.292 0.396 1e-46
Q570S7 760 Cellulose synthase-like p yes no 0.890 0.342 0.348 1e-44
Q0WVN5 751 Cellulose synthase-like p no no 0.890 0.346 0.348 9e-44
Q8VYR4 722 Cellulose synthase-like p no no 0.897 0.362 0.359 1e-43
Q8VZK9 729 Cellulose synthase-like p no no 0.873 0.349 0.351 3e-43
Q9SKJ5 1065 Probable cellulose syntha no no 0.917 0.251 0.354 4e-43
O80891 755 Cellulose synthase-like p no no 0.75 0.290 0.383 1e-42
O48946 1081 Cellulose synthase A cata no no 0.921 0.248 0.352 2e-42
>sp|Q651X6|CSLE6_ORYSJ Cellulose synthase-like protein E6 OS=Oryza sativa subsp. japonica GN=CSLE6 PE=2 SV=1 Back     alignment and function desciption
 Score =  188 bits (478), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 107/268 (39%), Positives = 152/268 (56%), Gaps = 24/268 (8%)

Query: 39  SLAFLVYYRVSYFFQVSNARAAPLLPWLLVFAAELLLSFQWLLGIAYRWRPISRTVFPER 98
            +  ++YYR +        RAA    WL + AAEL  +  W++  + RW P+ R  F  R
Sbjct: 33  GILLVLYYRATRVPAAGEGRAA----WLGMAAAELWFAVYWVITQSVRWCPVRRRTFKNR 88

Query: 99  LPE--ADQLPGIDVFICTADPTKEPTVEVMNTVLSAMALDYPPEKLHVYLSDDGGASITL 156
           L E   + LPG+DVF+CTADP  EP   V++T+LS MA +YP EK+ VYLSDDGG+ +T 
Sbjct: 89  LAERYKENLPGVDVFVCTADPHAEPPSLVISTILSVMAYNYPSEKISVYLSDDGGSILTF 148

Query: 157 LGMREAWKFARSWLPFCKRFGIKTICPEAYFSDPENGDGDSGNAEFIVEREKIKEKYTEF 216
             + EA  FA+ WLPFC+R+ I+   P AYFS+ E         E+      IK  Y E 
Sbjct: 149 YALWEASMFAKKWLPFCRRYNIEPRSPAAYFSESEGHHNLCSPKEW----SFIKNLYEEM 204

Query: 217 KERVTRAI------EKWGLENEGISR------SRDHPSVVEVIGENDNEAANEEQQMNNK 264
           +ER+  A+      E+  L+++G         S++H  +V+V+   D ++ N      N 
Sbjct: 205 RERIDSAVMSGKIPEEIKLKHKGFDEWNSEMTSKNHQPIVQVL--IDGKSQNAVDDDGNV 262

Query: 265 MPLLVYVAREKRPSHPHNFKAGALNVLV 292
           +P LVY+AREK P + HNFKAGALN L+
Sbjct: 263 LPTLVYMAREKSPQYHHNFKAGALNALI 290
Thought to be a Golgi-localized beta-glycan synthase that polymerize the backbones of noncellulosic polysaccharides (hemicelluloses) of plant cell wall.
Oryza sativa subsp. japonica (taxid: 39947)
EC: 2EC: .EC: 4EC: .EC: 1EC: .EC: -
>sp|Q651X7|CSLE1_ORYSJ Cellulose synthase-like protein E1 OS=Oryza sativa subsp. japonica GN=CSLE1 PE=2 SV=2 Back     alignment and function description
>sp|Q0DXZ1|CSLE2_ORYSJ Cellulose synthase-like protein E2 OS=Oryza sativa subsp. japonica GN=CSLE2 PE=2 SV=1 Back     alignment and function description
>sp|Q570S7|CSLG1_ARATH Cellulose synthase-like protein G1 OS=Arabidopsis thaliana GN=CSLG1 PE=2 SV=1 Back     alignment and function description
>sp|Q0WVN5|CSLG3_ARATH Cellulose synthase-like protein G3 OS=Arabidopsis thaliana GN=CSLG3 PE=2 SV=2 Back     alignment and function description
>sp|Q8VYR4|CSLG2_ARATH Cellulose synthase-like protein G2 OS=Arabidopsis thaliana GN=CSLG2 PE=2 SV=1 Back     alignment and function description
>sp|Q8VZK9|CSLE1_ARATH Cellulose synthase-like protein E1 OS=Arabidopsis thaliana GN=CSLE1 PE=1 SV=1 Back     alignment and function description
>sp|Q9SKJ5|CESAA_ARATH Probable cellulose synthase A catalytic subunit 10 [UDP-forming] OS=Arabidopsis thaliana GN=CESA10 PE=2 SV=1 Back     alignment and function description
>sp|O80891|CSLB4_ARATH Cellulose synthase-like protein B4 OS=Arabidopsis thaliana GN=CSLB4 PE=3 SV=1 Back     alignment and function description
>sp|O48946|CESA1_ARATH Cellulose synthase A catalytic subunit 1 [UDP-forming] OS=Arabidopsis thaliana GN=CESA1 PE=1 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query292
359477703 733 PREDICTED: cellulose synthase-like prote 0.924 0.368 0.624 5e-97
297737188 822 unnamed protein product [Vitis vinifera] 0.938 0.333 0.597 2e-96
147785659 643 hypothetical protein VITISV_002996 [Viti 0.931 0.423 0.597 1e-95
359477392 678 PREDICTED: cellulose synthase-like prote 0.928 0.399 0.6 1e-95
359477617 550 PREDICTED: cellulose synthase A catalyti 0.928 0.492 0.603 5e-95
356535446 740 PREDICTED: cellulose synthase-like prote 0.941 0.371 0.600 7e-95
224111028 857 predicted protein [Populus trichocarpa] 0.976 0.332 0.56 3e-94
255576870 762 cellulose synthase, putative [Ricinus co 0.931 0.356 0.613 4e-93
255576874 570 transferase, putative [Ricinus communis] 0.941 0.482 0.579 1e-90
356548660 736 PREDICTED: cellulose synthase-like prote 0.917 0.364 0.590 2e-87
>gi|359477703|ref|XP_002280696.2| PREDICTED: cellulose synthase-like protein G2-like [Vitis vinifera] Back     alignment and taxonomy information
 Score =  360 bits (923), Expect = 5e-97,   Method: Compositional matrix adjust.
 Identities = 178/285 (62%), Positives = 214/285 (75%), Gaps = 15/285 (5%)

Query: 10  QQNSLPLHVSHVKKSSLIINRSLVLLHFTSLAFLVYYRVSYFFQVSNARA-APLLPWLLV 68
             +SLPL + +V+KS+ IINR   L+H T+L  LVYYR S+ FQ    RA  P  PWLLV
Sbjct: 1   MDSSLPLQLCYVRKSTAIINRWYTLIHSTALMALVYYRASFLFQNPENRAHTPTSPWLLV 60

Query: 69  FAAELLLSFQWLLGIAYRWRPISRTVFPERLPEADQLPGIDVFICTADPTKEPTVEVMNT 128
           FA EL+LSF WLLG AYRWRP++RT+FPERLPE   LP IDVFICTADP +EPT  VMNT
Sbjct: 61  FAGELILSFIWLLGQAYRWRPVTRTLFPERLPEDKHLPAIDVFICTADPKREPTFGVMNT 120

Query: 129 VLSAMALDYPPEKLHVYLSDDGGASITLLGMREAWKFARSWLPFCKRFGIKTICPEAYFS 188
           V+SAMALDYPPE+LHVY+SDDGG+S+TL GM+EAW FARSWLPFC+  GIKT CPEAYFS
Sbjct: 121 VISAMALDYPPERLHVYVSDDGGSSLTLYGMKEAWAFARSWLPFCRTHGIKTRCPEAYFS 180

Query: 189 DPENGDG-DSGNAEFIVEREKIKEKYTEFKERVTRAIEKWGLENEGISRSRDHPSVVEVI 247
             EN +G D    EF  ER+KIK+++  F+ERV RA E  G+ ++ I  S DHPS++EVI
Sbjct: 181 SAENDEGADLRGTEFFEERKKIKKEFELFRERVMRATENGGIGDKSI--SGDHPSIIEVI 238

Query: 248 GENDNEAANEEQQMNNKMPLLVYVAREKRPSHPHNFKAGALNVLV 292
           G  + E           MP+LVYV+REKRPSHPH+FKAGALNVL+
Sbjct: 239 GAEEAE-----------MPILVYVSREKRPSHPHHFKAGALNVLL 272

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|297737188|emb|CBI26389.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|147785659|emb|CAN70913.1| hypothetical protein VITISV_002996 [Vitis vinifera] Back     alignment and taxonomy information
>gi|359477392|ref|XP_002280640.2| PREDICTED: cellulose synthase-like protein G2-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|359477617|ref|XP_002280659.2| PREDICTED: cellulose synthase A catalytic subunit 4 [UDP-forming]-like, partial [Vitis vinifera] Back     alignment and taxonomy information
>gi|356535446|ref|XP_003536256.1| PREDICTED: cellulose synthase-like protein G2-like [Glycine max] Back     alignment and taxonomy information
>gi|224111028|ref|XP_002315722.1| predicted protein [Populus trichocarpa] gi|222864762|gb|EEF01893.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|255576870|ref|XP_002529321.1| cellulose synthase, putative [Ricinus communis] gi|223531245|gb|EEF33090.1| cellulose synthase, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|255576874|ref|XP_002529323.1| transferase, putative [Ricinus communis] gi|223531247|gb|EEF33092.1| transferase, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|356548660|ref|XP_003542718.1| PREDICTED: cellulose synthase-like protein G2-like [Glycine max] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query292
TAIR|locus:2012050 729 CSLE1 "AT1G55850" [Arabidopsis 0.934 0.374 0.362 2.5e-40
TAIR|locus:2138116 722 CSLG2 "AT4G24000" [Arabidopsis 0.897 0.362 0.356 5e-40
TAIR|locus:2127776 1081 CESA1 "cellulose synthase 1" [ 0.917 0.247 0.351 5.3e-40
TAIR|locus:2040080 1065 CESA10 "cellulose synthase 10" 0.917 0.251 0.351 6.6e-40
TAIR|locus:2138106 751 CSLG3 "AT4G23990" [Arabidopsis 0.890 0.346 0.354 1.3e-39
UNIPROTKB|Q2QNS6 1215 CSLD4 "Cellulose synthase-like 0.664 0.159 0.386 1.7e-39
TAIR|locus:2138126 760 CSLG1 "AT4G24010" [Arabidopsis 0.890 0.342 0.358 1.8e-39
TAIR|locus:2060211 755 CSLB04 "AT2G32540" [Arabidopsi 0.921 0.356 0.338 7.7e-39
TAIR|locus:2031740 979 CSLD6 "AT1G32180" [Arabidopsis 0.732 0.218 0.364 3.2e-38
TAIR|locus:2156789 1065 CEV1 "CONSTITUTIVE EXPRESSION 0.952 0.261 0.331 5.6e-38
TAIR|locus:2012050 CSLE1 "AT1G55850" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 435 (158.2 bits), Expect = 2.5e-40, P = 2.5e-40
 Identities = 102/281 (36%), Positives = 146/281 (51%)

Query:    15 PLHVSHVKKSSLIINRSLVLLHFTSLAFLVYYRVSYFFQVSNARAAPLLPWLLVFAAELL 74
             PL  +  +   +I  R      F  +  + +YR+       N      L W ++F  E+ 
Sbjct:    18 PLFETRRRTGRVIAYRFFSASVFVCICLIWFYRIGEIGD--NRTVLDRLIWFVMFIVEIW 75

Query:    75 LSFQWLLGIAYRWRPISRTVFPERLPE--ADQLPGIDVFICTADPTKEPTVEVMNTVLSA 132
                 W++  + RW P+ R  F +RL       LP +DVF+CTADP  EP + V+NTVLS 
Sbjct:    76 FGLYWVVTQSSRWNPVWRFPFSDRLSRRYGSDLPRLDVFVCTADPVIEPPLLVVNTVLSV 135

Query:   133 MALDYPPEKLHVYLSDDGGASITLLGMREAWKFARSWLPFCKRFGIKTICPEAYFSDPEN 192
              ALDYPPEKL VYLSDDGG+ +T   + EA +FA++W+PFCK+F ++   P AY S   N
Sbjct:   136 TALDYPPEKLAVYLSDDGGSELTFYALTEAAEFAKTWVPFCKKFNVEPTSPAAYLSSKAN 195

Query:   193 GDGDSGNAEFIVEREKIKEKYTEFKERVTRAIEKWGLE-NEGISRSRDHPSVVEVIGXXX 251
                DS  AE + +  +      E   R+ R  E+  ++  +G S+  D  +     G   
Sbjct:   196 CL-DSA-AEEVAKLYREMAARIETAARLGRIPEEARVKYGDGFSQW-DADATRRNHGTIL 252

Query:   252 XXXXXXXXXXXXKMPLLVYVAREKRPSHPHNFKAGALNVLV 292
                          +P LVY++REKRP H HNFKAGA+N L+
Sbjct:   253 QVLVDGREGNTIAIPTLVYLSREKRPQHHHNFKAGAMNALL 293
GO:0000271 "polysaccharide biosynthetic process" evidence=ISS
GO:0005794 "Golgi apparatus" evidence=ISM
GO:0009832 "plant-type cell wall biogenesis" evidence=ISS
GO:0016020 "membrane" evidence=IEA
GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISS
GO:0016759 "cellulose synthase activity" evidence=ISS
GO:0016760 "cellulose synthase (UDP-forming) activity" evidence=IEA
GO:0030244 "cellulose biosynthetic process" evidence=IEA
GO:0005783 "endoplasmic reticulum" evidence=IDA
GO:0005886 "plasma membrane" evidence=IDA
GO:0046482 "para-aminobenzoic acid metabolic process" evidence=RCA
TAIR|locus:2138116 CSLG2 "AT4G24000" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2127776 CESA1 "cellulose synthase 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2040080 CESA10 "cellulose synthase 10" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2138106 CSLG3 "AT4G23990" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
UNIPROTKB|Q2QNS6 CSLD4 "Cellulose synthase-like protein D4" [Oryza sativa Japonica Group (taxid:39947)] Back     alignment and assigned GO terms
TAIR|locus:2138126 CSLG1 "AT4G24010" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2060211 CSLB04 "AT2G32540" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2031740 CSLD6 "AT1G32180" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2156789 CEV1 "CONSTITUTIVE EXPRESSION OF VSP 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer2.4.1LOW CONFIDENCE prediction!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
estExt_fgenesh4_pg.C_LG_X0687
hypothetical protein (857 aa)
(Populus trichocarpa)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query292
PLN02893 734 PLN02893, PLN02893, Cellulose synthase-like protei 9e-70
PLN02400 1085 PLN02400, PLN02400, cellulose synthase 1e-53
PLN02190 756 PLN02190, PLN02190, cellulose synthase-like protei 1e-51
PLN02638 1079 PLN02638, PLN02638, cellulose synthase A (UDP-form 1e-51
PLN02248 1135 PLN02248, PLN02248, cellulose synthase-like protei 5e-51
PLN02195 977 PLN02195, PLN02195, cellulose synthase A 8e-51
PLN02436 1094 PLN02436, PLN02436, cellulose synthase A 3e-50
PLN02189 1040 PLN02189, PLN02189, cellulose synthase 2e-49
PLN02915 1044 PLN02915, PLN02915, cellulose synthase A [UDP-form 4e-49
pfam03552 716 pfam03552, Cellulose_synt, Cellulose synthase 4e-48
TIGR03030 713 TIGR03030, CelA, cellulose synthase catalytic subu 2e-14
cd06421234 cd06421, CESA_CelA_like, CESA_CelA_like are involv 1e-08
PRK11498 852 PRK11498, bcsA, cellulose synthase catalytic subun 8e-07
>gnl|CDD|215483 PLN02893, PLN02893, Cellulose synthase-like protein Back     alignment and domain information 
 Score =  228 bits (584), Expect = 9e-70
 Identities = 119/299 (39%), Positives = 166/299 (55%), Gaps = 38/299 (12%)

Query: 13  SLPLHVSHVKKSSLIINRSLVLLHFTSLAFLVYYRVSYFFQVSNARAAPLLPWLLVFAAE 72
           + PLH  H  + + I NR   +++  ++  L+Y+ V      +       L  LL+  A+
Sbjct: 11  APPLHTCHPMRRT-IANRVFAVVYSCAILALLYHHVIALLHSTT-----TLITLLLLLAD 64

Query: 73  LLLSFQWLLGIAYRWRPISRTVFPERL----PEADQLPGIDVFICTADPTKEPTVEVMNT 128
           ++L+F W    A+R  P+ R VF E L     E+D  PG+DVFICTADP KEP + V+NT
Sbjct: 65  IVLAFMWATTQAFRMCPVHRRVFIEHLEHYAKESD-YPGLDVFICTADPYKEPPMGVVNT 123

Query: 129 VLSAMALDYPPEKLHVYLSDDGGASITLLGMREAWKFARSWLPFCKRFGIKTICPEAYFS 188
            LS MA DYP EKL VY+SDDGG+ +TL    EA KFA  WLPFCK+  I   CPEAYFS
Sbjct: 124 ALSVMAYDYPTEKLSVYVSDDGGSKLTLFAFMEAAKFATHWLPFCKKNKIVERCPEAYFS 183

Query: 189 DPENGDGDSGNAEFIVEREKIKEKYTEFKERVTRAIEKWGLENEGI---------SR--- 236
                   S +  +  E E+IK  Y   K RV   +E+  +  + I         SR   
Sbjct: 184 --------SNSHSWSPETEQIKMMYESMKVRVENVVERGKVSTDYITCDQEREAFSRWTD 235

Query: 237 ---SRDHPSVVEVIGENDNEAANEEQQMNNKMPLLVYVAREKRPSHPHNFKAGALNVLV 292
               +DHP+V++V+ E+      ++    + MP L+YV+REK  + PH+FKAGALN L+
Sbjct: 236 KFTRQDHPTVIQVLLESG----KDKDITGHTMPNLIYVSREKSKNSPHHFKAGALNTLL 290

Length = 734
>gnl|CDD|215224 PLN02400, PLN02400, cellulose synthase Back     alignment and domain information
>gnl|CDD|215122 PLN02190, PLN02190, cellulose synthase-like protein Back     alignment and domain information
>gnl|CDD|215343 PLN02638, PLN02638, cellulose synthase A (UDP-forming), catalytic subunit Back     alignment and domain information
>gnl|CDD|215138 PLN02248, PLN02248, cellulose synthase-like protein Back     alignment and domain information
>gnl|CDD|215124 PLN02195, PLN02195, cellulose synthase A Back     alignment and domain information
>gnl|CDD|215239 PLN02436, PLN02436, cellulose synthase A Back     alignment and domain information
>gnl|CDD|215121 PLN02189, PLN02189, cellulose synthase Back     alignment and domain information
>gnl|CDD|215494 PLN02915, PLN02915, cellulose synthase A [UDP-forming], catalytic subunit Back     alignment and domain information
>gnl|CDD|217611 pfam03552, Cellulose_synt, Cellulose synthase Back     alignment and domain information
>gnl|CDD|234095 TIGR03030, CelA, cellulose synthase catalytic subunit (UDP-forming) Back     alignment and domain information
>gnl|CDD|133043 cd06421, CESA_CelA_like, CESA_CelA_like are involved in the elongation of the glucan chain of cellulose Back     alignment and domain information
>gnl|CDD|236918 PRK11498, bcsA, cellulose synthase catalytic subunit; Provisional Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 292
PLN02915 1044 cellulose synthase A [UDP-forming], catalytic subu 100.0
PLN02400 1085 cellulose synthase 100.0
PLN02436 1094 cellulose synthase A 100.0
PLN02195 977 cellulose synthase A 100.0
PLN02638 1079 cellulose synthase A (UDP-forming), catalytic subu 100.0
PLN02189 1040 cellulose synthase 100.0
PLN02248 1135 cellulose synthase-like protein 100.0
PLN02190 756 cellulose synthase-like protein 100.0
PLN02893 734 Cellulose synthase-like protein 100.0
PF03552 720 Cellulose_synt: Cellulose synthase; InterPro: IPR0 100.0
TIGR03030 713 CelA cellulose synthase catalytic subunit (UDP-for 99.92
PRK11498 852 bcsA cellulose synthase catalytic subunit; Provisi 99.91
PRK05454 691 glucosyltransferase MdoH; Provisional 99.48
COG1215 439 Glycosyltransferases, probably involved in cell wa 99.23
TIGR03111 439 glyc2_xrt_Gpos1 putative glycosyltransferase TIGR0 99.15
PRK14583 444 hmsR N-glycosyltransferase; Provisional 99.11
cd04191254 Glucan_BSP_ModH Glucan_BSP_ModH catalyzes the elon 99.0
cd06421234 CESA_CelA_like CESA_CelA_like are involved in the 99.0
PRK11204 420 N-glycosyltransferase; Provisional 98.99
cd06437232 CESA_CaSu_A2 Cellulose synthase catalytic subunit 98.74
TIGR03472 373 HpnI hopanoid biosynthesis associated glycosyl tra 98.73
cd06439251 CESA_like_1 CESA_like_1 is a member of the cellulo 98.7
TIGR03469 384 HonB hopene-associated glycosyltransferase HpnB. T 98.68
cd06435236 CESA_NdvC_like NdvC_like proteins in this family a 98.6
PRK14716 504 bacteriophage N4 adsorption protein B; Provisional 98.55
cd06427241 CESA_like_2 CESA_like_2 is a member of the cellulo 98.51
PRK11234 727 nfrB bacteriophage N4 adsorption protein B; Provis 98.47
cd02520196 Glucosylceramide_synthase Glucosylceramide synthas 98.42
cd06438183 EpsO_like EpsO protein participates in the methano 98.39
cd04190244 Chitin_synth_C C-terminal domain of Chitin Synthas 98.29
cd04195201 GT2_AmsE_like GT2_AmsE_like is involved in exopoly 98.23
cd04196214 GT_2_like_d Subfamily of Glycosyltransferase Famil 98.22
cd04184202 GT2_RfbC_Mx_like Myxococcus xanthus RfbC like prot 98.21
PTZ00260333 dolichyl-phosphate beta-glucosyltransferase; Provi 98.17
PF13641228 Glyco_tranf_2_3: Glycosyltransferase like family 2 98.17
COG0463 291 WcaA Glycosyltransferases involved in cell wall bi 98.11
PRK15489 703 nfrB bacteriophage N4 adsorption protein B; Provis 98.01
cd04192229 GT_2_like_e Subfamily of Glycosyltransferase Famil 97.99
cd02525249 Succinoglycan_BP_ExoA ExoA is involved in the bios 97.93
PRK10063248 putative glycosyl transferase; Provisional 97.93
PF00535169 Glycos_transf_2: Glycosyl transferase family 2; In 97.87
PRK10018279 putative glycosyl transferase; Provisional 97.85
PRK10073 328 putative glycosyl transferase; Provisional 97.83
cd06433202 GT_2_WfgS_like WfgS and WfeV are involved in O-ant 97.77
cd04185202 GT_2_like_b Subfamily of Glycosyltransferase Famil 97.73
cd06420182 GT2_Chondriotin_Pol_N N-terminal domain of Chondro 97.69
COG2943 736 MdoH Membrane glycosyltransferase [Cell envelope b 97.69
PRK13915306 putative glucosyl-3-phosphoglycerate synthase; Pro 97.67
PLN02726243 dolichyl-phosphate beta-D-mannosyltransferase 97.65
cd06434235 GT2_HAS Hyaluronan synthases catalyze polymerizati 97.6
cd06913219 beta3GnTL1_like Beta 1, 3-N-acetylglucosaminyltran 97.6
cd06423180 CESA_like CESA_like is the cellulose synthase supe 97.58
cd04188211 DPG_synthase DPG_synthase is involved in protein N 97.53
cd04179185 DPM_DPG-synthase_like DPM_DPG-synthase_like is a m 97.52
cd06436191 GlcNAc-1-P_transferase N-acetyl-glucosamine transf 97.51
cd02510 299 pp-GalNAc-T pp-GalNAc-T initiates the formation of 97.51
cd06442224 DPM1_like DPM1_like represents putative enzymes si 97.41
cd02511229 Beta4Glucosyltransferase UDP-glucose LOS-beta-1,4 97.41
cd02522221 GT_2_like_a GT_2_like_a represents a glycosyltrans 97.4
cd04186166 GT_2_like_c Subfamily of Glycosyltransferase Famil 97.16
PRK10714 325 undecaprenyl phosphate 4-deoxy-4-formamido-L-arabi 97.0
cd04187181 DPM1_like_bac Bacterial DPM1_like enzymes are rela 96.99
cd00761156 Glyco_tranf_GTA_type Glycosyltransferase family A 96.74
cd02526237 GT2_RfbF_like RfbF is a putative dTDP-rhamnosyl tr 96.39
COG1216 305 Predicted glycosyltransferases [General function p 95.41
cd02514 334 GT13_GLCNAC-TI GT13_GLCNAC-TI is involved in an es 94.97
KOG2977323 consensus Glycosyltransferase [General function pr 94.86
PF03142 527 Chitin_synth_2: Chitin synthase; InterPro: IPR0048 93.9
KOG2978238 consensus Dolichol-phosphate mannosyltransferase [ 92.47
KOG3738 559 consensus Predicted polypeptide N-acetylgalactosam 92.08
PF10111 281 Glyco_tranf_2_2: Glycosyltransferase like family 2 85.2
TIGR01556 281 rhamnosyltran L-rhamnosyltransferase. Rhamnolipids 84.29
>PLN02915 cellulose synthase A [UDP-forming], catalytic subunit Back     alignment and domain information 
Probab=100.00  E-value=3.9e-87  Score=696.48  Aligned_cols=270  Identities=36%  Similarity=0.625  Sum_probs=242.2

Q ss_pred             CCCCceeeeecccch-hHHHHHHHHHHHHHHHHHHHHhhhcccCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHhhccc
Q 022795           12 NSLPLHVSHVKKSSL-IINRSLVLLHFTSLAFLVYYRVSYFFQVSNARAAPLLPWLLVFAAELLLSFQWLLGIAYRWRPI   90 (292)
Q Consensus        12 ~~~~l~~~~~~~~~~-~~~R~~~~~~~~~l~~yl~wR~~~tl~~~~~~~~~~~~wl~l~~aE~~~~~~~ll~~~~~~~pv   90 (292)
                      ..+||+++.+.++.. .+||+++++++++++++|+||+++    |.  .+++|+|+++++||+||+|+|+|+|+.||+|+
T Consensus       191 ~~~pL~~~~~i~~~~~~pyR~~~~~rlv~l~~fl~yRi~~----~~--~~a~~~Wl~s~~cE~wFaf~Wll~q~~Kw~Pv  264 (1044)
T PLN02915        191 ARQPLWRKVPIPSSKINPYRIVIVLRLVILCFFFRFRILT----PA--YDAYPLWLISVICEIWFALSWILDQFPKWFPI  264 (1044)
T ss_pred             cCCCceEEEecCcccchhHHHHHHHHHHHHHHHHHHHhcC----cC--CCchHHHHHHHHHHHHHHHHHHHccCcccccc
Confidence            468899998776553 479999999999999999999988    22  25689999999999999999999999999999


Q ss_pred             CCCCCCCCCCC-------CCCCCceEEEEecCCCCCCChHHHHHHHHHHhcCCCCCCCcEEEEEcCCCCcccHHHHHHHH
Q 022795           91 SRTVFPERLPE-------ADQLPGIDVFICTADPTKEPTVEVMNTVLSAMALDYPPEKLHVYLSDDGGASITLLGMREAW  163 (292)
Q Consensus        91 ~r~~~~~~l~~-------~~~lP~VDVfI~Tynp~~Ep~~vv~~Tvls~lalDYP~~kl~VyVlDDG~s~~T~~~l~ea~  163 (292)
                      +|.+++++|.+       +++||+|||||||+||.+|||.+++|||||+||+|||.+||+|||||||+|.+|||+|.||+
T Consensus       265 ~R~t~~drL~~r~e~~~~~~~LP~vDvFV~TADP~kEPPl~t~NTVLSiLA~DYP~eKlscYvSDDGgS~LTf~AL~EAa  344 (1044)
T PLN02915        265 NRETYLDRLSMRFERDGEPNRLAPVDVFVSTVDPLKEPPIITANTVLSILAVDYPVDKVSCYVSDDGASMLLFDTLSETA  344 (1044)
T ss_pred             ccccCHHHHHHHhccCCCcccCCceeeEeccCCcccCcchHHHHHHHHHHhhcccccceeEEEecCCchHhHHHHHHHHH
Confidence            99999999873       23499999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHhhchHHHHHHhCCCCCCCccceeCCCCCCCCCChhhhHHHHHHHHHHHHHHHHHHHHHhhh------------cCCCC
Q 022795          164 KFARSWLPFCKRFGIKTICPEAYFSDPENGDGDSGNAEFIVEREKIKEKYTEFKERVTRAIEK------------WGLEN  231 (292)
Q Consensus       164 ~fa~~W~pfc~k~gv~~R~P~~Yf~r~~~~~~kagn~n~a~~~~~~k~~Ye~~k~ri~~~~~~------------~~~~~  231 (292)
                      +||++|+||||||+|+|||||+||+.+.+.....-..+|.+||++||+||||||+|||.+.++            ++++|
T Consensus       345 ~FAk~WvPFCkK~~IepRaPe~YFs~~~~~~~~~~~~~F~~e~~~mKreYEe~K~RIe~l~~~~~~~~~~~~~m~dgt~W  424 (1044)
T PLN02915        345 EFARRWVPFCKKHNIEPRAPEFYFSQKIDYLKDKVQPTFVKERRAMKREYEEFKVRINALVAKAQKKPEEGWVMQDGTPW  424 (1044)
T ss_pred             HHHHhhcchhhhcCCCcCCHHHHhccCCCccccccCchhHHHHHHHHHHHHHHHHHHHHHHhhhccCCcccccccCCccC
Confidence            999999999999999999999999998765433334699999999999999999999976433            56789


Q ss_pred             CCCCCCCCCcchhhhhccCCCcchhhhhhcCCCCceeEeeeccCCCCCCCccccccccccC
Q 022795          232 EGISRSRDHPSVVEVIGENDNEAANEEQQMNNKMPLLVYVAREKRPSHPHNFKAGALNVLV  292 (292)
Q Consensus       232 ~~~~~~~~h~~ivqv~~~~~~~~~d~~~~~~~~lP~lvyvsReKrp~~~H~~KAGamN~l~  292 (292)
                      +.+.+ +|||+|||||++++++. |.+   |++||+||||||||||+|+|||||||||||+
T Consensus       425 ~g~~~-~dHp~IIqVll~~~~~~-d~~---g~~lP~LVYVSREKRP~~~Hh~KAGAMNaLl  480 (1044)
T PLN02915        425 PGNNT-RDHPGMIQVYLGSEGAL-DVE---GKELPRLVYVSREKRPGYNHHKKAGAMNALV  480 (1044)
T ss_pred             CCCCC-CCCccceEEeecCCCCc-ccc---cCccceeEEEecccCCCCCcchhhhhhhhHh
Confidence            85554 89999999999987643 555   7899999999999999999999999999996

>PLN02400 cellulose synthase Back     alignment and domain information
>PLN02436 cellulose synthase A Back     alignment and domain information
>PLN02195 cellulose synthase A Back     alignment and domain information
>PLN02638 cellulose synthase A (UDP-forming), catalytic subunit Back     alignment and domain information
>PLN02189 cellulose synthase Back     alignment and domain information
>PLN02248 cellulose synthase-like protein Back     alignment and domain information
>PLN02190 cellulose synthase-like protein Back     alignment and domain information
>PLN02893 Cellulose synthase-like protein Back     alignment and domain information
>PF03552 Cellulose_synt: Cellulose synthase; InterPro: IPR005150 Cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues, is the major component of wood and thus paper, and is synthesized by plants, most algae, some bacteria and fungi, and even some animals Back     alignment and domain information
>TIGR03030 CelA cellulose synthase catalytic subunit (UDP-forming) Back     alignment and domain information
>PRK11498 bcsA cellulose synthase catalytic subunit; Provisional Back     alignment and domain information
>PRK05454 glucosyltransferase MdoH; Provisional Back     alignment and domain information
>COG1215 Glycosyltransferases, probably involved in cell wall biogenesis [Cell envelope biogenesis, outer membrane] Back     alignment and domain information
>TIGR03111 glyc2_xrt_Gpos1 putative glycosyltransferase TIGR03111 Back     alignment and domain information
>PRK14583 hmsR N-glycosyltransferase; Provisional Back     alignment and domain information
>cd04191 Glucan_BSP_ModH Glucan_BSP_ModH catalyzes the elongation of beta-1,2 polyglucose chains of glucan Back     alignment and domain information
>cd06421 CESA_CelA_like CESA_CelA_like are involved in the elongation of the glucan chain of cellulose Back     alignment and domain information
>PRK11204 N-glycosyltransferase; Provisional Back     alignment and domain information
>cd06437 CESA_CaSu_A2 Cellulose synthase catalytic subunit A2 (CESA2) is a catalytic subunit or a catalytic subunit substitute of the cellulose synthase complex Back     alignment and domain information
>TIGR03472 HpnI hopanoid biosynthesis associated glycosyl transferase protein HpnI Back     alignment and domain information
>cd06439 CESA_like_1 CESA_like_1 is a member of the cellulose synthase (CESA) superfamily Back     alignment and domain information
>TIGR03469 HonB hopene-associated glycosyltransferase HpnB Back     alignment and domain information
>cd06435 CESA_NdvC_like NdvC_like proteins in this family are putative bacterial beta-(1,6)-glucosyltransferase Back     alignment and domain information
>PRK14716 bacteriophage N4 adsorption protein B; Provisional Back     alignment and domain information
>cd06427 CESA_like_2 CESA_like_2 is a member of the cellulose synthase superfamily Back     alignment and domain information
>PRK11234 nfrB bacteriophage N4 adsorption protein B; Provisional Back     alignment and domain information
>cd02520 Glucosylceramide_synthase Glucosylceramide synthase catalyzes the first glycosylation step of glycosphingolipid synthesis Back     alignment and domain information
>cd06438 EpsO_like EpsO protein participates in the methanolan synthesis Back     alignment and domain information
>cd04190 Chitin_synth_C C-terminal domain of Chitin Synthase catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin Back     alignment and domain information
>cd04195 GT2_AmsE_like GT2_AmsE_like is involved in exopolysaccharide amylovora biosynthesis Back     alignment and domain information
>cd04196 GT_2_like_d Subfamily of Glycosyltransferase Family GT2 of unknown function Back     alignment and domain information
>cd04184 GT2_RfbC_Mx_like Myxococcus xanthus RfbC like proteins are required for O-antigen biosynthesis Back     alignment and domain information
>PTZ00260 dolichyl-phosphate beta-glucosyltransferase; Provisional Back     alignment and domain information
>PF13641 Glyco_tranf_2_3: Glycosyltransferase like family 2; PDB: 4FIY_B 4FIX_A Back     alignment and domain information
>COG0463 WcaA Glycosyltransferases involved in cell wall biogenesis [Cell envelope biogenesis, outer membrane] Back     alignment and domain information
>PRK15489 nfrB bacteriophage N4 adsorption protein B; Provisional Back     alignment and domain information
>cd04192 GT_2_like_e Subfamily of Glycosyltransferase Family GT2 of unknown function Back     alignment and domain information
>cd02525 Succinoglycan_BP_ExoA ExoA is involved in the biosynthesis of succinoglycan Back     alignment and domain information
>PRK10063 putative glycosyl transferase; Provisional Back     alignment and domain information
>PF00535 Glycos_transf_2: Glycosyl transferase family 2; InterPro: IPR001173 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases Back     alignment and domain information
>PRK10018 putative glycosyl transferase; Provisional Back     alignment and domain information
>PRK10073 putative glycosyl transferase; Provisional Back     alignment and domain information
>cd06433 GT_2_WfgS_like WfgS and WfeV are involved in O-antigen biosynthesis Back     alignment and domain information
>cd04185 GT_2_like_b Subfamily of Glycosyltransferase Family GT2 of unknown function Back     alignment and domain information
>cd06420 GT2_Chondriotin_Pol_N N-terminal domain of Chondroitin polymerase functions as a GalNAc transferase Back     alignment and domain information
>COG2943 MdoH Membrane glycosyltransferase [Cell envelope biogenesis, outer membrane] Back     alignment and domain information
>PRK13915 putative glucosyl-3-phosphoglycerate synthase; Provisional Back     alignment and domain information
>PLN02726 dolichyl-phosphate beta-D-mannosyltransferase Back     alignment and domain information
>cd06434 GT2_HAS Hyaluronan synthases catalyze polymerization of hyaluronan Back     alignment and domain information
>cd06913 beta3GnTL1_like Beta 1, 3-N-acetylglucosaminyltransferase is essential for the formation of poly-N-acetyllactosamine Back     alignment and domain information
>cd06423 CESA_like CESA_like is the cellulose synthase superfamily Back     alignment and domain information
>cd04188 DPG_synthase DPG_synthase is involved in protein N-linked glycosylation Back     alignment and domain information
>cd04179 DPM_DPG-synthase_like DPM_DPG-synthase_like is a member of the Glycosyltransferase 2 superfamily Back     alignment and domain information
>cd06436 GlcNAc-1-P_transferase N-acetyl-glucosamine transferase is involved in the synthesis of Poly-beta-1,6-N-acetyl-D-glucosamine Back     alignment and domain information
>cd02510 pp-GalNAc-T pp-GalNAc-T initiates the formation of mucin-type O-linked glycans Back     alignment and domain information
>cd06442 DPM1_like DPM1_like represents putative enzymes similar to eukaryotic DPM1 Back     alignment and domain information
>cd02511 Beta4Glucosyltransferase UDP-glucose LOS-beta-1,4 glucosyltransferase is required for biosynthesis of lipooligosaccharide Back     alignment and domain information
>cd02522 GT_2_like_a GT_2_like_a represents a glycosyltransferase family-2 subfamily with unknown function Back     alignment and domain information
>cd04186 GT_2_like_c Subfamily of Glycosyltransferase Family GT2 of unknown function Back     alignment and domain information
>PRK10714 undecaprenyl phosphate 4-deoxy-4-formamido-L-arabinose transferase; Provisional Back     alignment and domain information
>cd04187 DPM1_like_bac Bacterial DPM1_like enzymes are related to eukaryotic DPM1 Back     alignment and domain information
>cd00761 Glyco_tranf_GTA_type Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold Back     alignment and domain information
>cd02526 GT2_RfbF_like RfbF is a putative dTDP-rhamnosyl transferase Back     alignment and domain information
>COG1216 Predicted glycosyltransferases [General function prediction only] Back     alignment and domain information
>cd02514 GT13_GLCNAC-TI GT13_GLCNAC-TI is involved in an essential step in the synthesis of complex or hybrid-type N-linked oligosaccharides Back     alignment and domain information
>KOG2977 consensus Glycosyltransferase [General function prediction only] Back     alignment and domain information
>PF03142 Chitin_synth_2: Chitin synthase; InterPro: IPR004835 Chitin synthase (2 Back     alignment and domain information
>KOG2978 consensus Dolichol-phosphate mannosyltransferase [General function prediction only] Back     alignment and domain information
>KOG3738 consensus Predicted polypeptide N-acetylgalactosaminyltransferase [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PF10111 Glyco_tranf_2_2: Glycosyltransferase like family 2; InterPro: IPR019290 This conserved domain is found in a set of prokaryotic proteins including putative glucosyltransferases, which are involved in bacterial capsule biosynthesis [, ] Back     alignment and domain information
>TIGR01556 rhamnosyltran L-rhamnosyltransferase Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query292
4hg6_A 802 Cellulose synthase subunit A; membrane translocati 99.83
1xhb_A 472 Polypeptide N-acetylgalactosaminyltransferase 1; g 98.42
1qg8_A255 Protein (spore coat polysaccharide biosynthesis P 98.38
3bcv_A240 Putative glycosyltransferase protein; protein stru 98.36
2z86_A 625 Chondroitin synthase; GT-A, glycosyltransferase A, 98.36
2d7i_A 570 Polypeptide N-acetylgalactosaminyltransferase 10; 98.18
3ckj_A329 Putative uncharacterized protein; mycobacteria, un 98.06
2ffu_A 501 Ppgalnact-2, polypeptide N-acetylgalactosaminyltra 97.88
3l7i_A 729 Teichoic acid biosynthesis protein F; GT-B fold, m 97.73
2z86_A625 Chondroitin synthase; GT-A, glycosyltransferase A, 97.59
3f1y_A 387 Mannosyl-3-phosphoglycerate synthase; GT-A type gl 97.55
4fix_A 657 UDP-galactofuranosyl transferase GLFT2; CAZY GT-2 96.7
2fy7_A287 Beta-1,4-galactosyltransferase 1; M339H mutant, AP 95.36
1fo8_A 343 Alpha-1,3-mannosyl-glycoprotein beta-1,2-N- acetyl 95.29
2wvl_A 391 Mannosyl-3-phosphoglycerate synthase; GT-A fold, t 95.21
2bo4_A 397 Mannosylglycerate synthase; catalysis, glycosyltra 95.12
2zu9_A 394 Mannosyl-3-phosphoglycerate synthase; GT-A fold, g 94.86
2nxv_A249 ATP synthase subunits region ORF 6; majastridin, A 93.88
>4hg6_A Cellulose synthase subunit A; membrane translocation, cellulose synthesis, UDP-GLC binding membrane, transferase; HET: BGC UDP LDA; 3.25A {Rhodobacter sphaeroides} Back     alignment and structure
Probab=99.83  E-value=1.2e-19  Score=188.76  Aligned_cols=166  Identities=23%  Similarity=0.319  Sum_probs=134.3

Q ss_pred             HHHHHHHHHHH-HHHHHHHHHhhhcccCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCCCCCC
Q 022795           28 INRSLVLLHFT-SLAFLVYYRVSYFFQVSNARAAPLLPWLLVFAAELLLSFQWLLGIAYRWRPISRTVFPERLPEADQLP  106 (292)
Q Consensus        28 ~~R~~~~~~~~-~l~~yl~wR~~~tl~~~~~~~~~~~~wl~l~~aE~~~~~~~ll~~~~~~~pv~r~~~~~~l~~~~~lP  106 (292)
                      +.|++.+++++ +.+.|++||++.+++... .+.+.++|++++++|+++.+.|+++++..++|..|...++.  .++++|
T Consensus        64 ~~~~~~~~~~~~~~~~y~~wr~~~tl~~~~-~~~~~~~~~~ll~~~~~~~~~~l~~~~~~~~~~~r~~~~~~--~~~~~P  140 (802)
T 4hg6_A           64 VPRFLLLSAASMLVMRYWFWRLFETLPPPA-LDASFLFALLLFAVETFSISIFFLNGFLSADPTDRPFPRPL--QPEELP  140 (802)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHTSCCCS-SCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCCCCCCCCC--CTTTCC
T ss_pred             chHHHHHHHHHHHHHHHHHHHhheecCCcc-chHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCCC--CccCCC
Confidence            44555444444 457899999999997532 34567888899999999999999999999999888765542  246789


Q ss_pred             ceEEEEecCCCCCCChHHHHHHHHHHhcCCCCCCCcEEEEEcCCCCcccHH-----HHHHHHHHhhchHHHHHHhCCCCC
Q 022795          107 GIDVFICTADPTKEPTVEVMNTVLSAMALDYPPEKLHVYLSDDGGASITLL-----GMREAWKFARSWLPFCKRFGIKTI  181 (292)
Q Consensus       107 ~VDVfI~Tynp~~Ep~~vv~~Tvls~lalDYP~~kl~VyVlDDG~s~~T~~-----~l~ea~~fa~~W~pfc~k~gv~~R  181 (292)
                      .|+|+|||||   |++.++.+|+.|+++++||.++++|+|+|||++|.|.+     ...+..+-......+|+++++.  
T Consensus       141 ~VSViIPtyN---e~~~lL~~~L~Sl~~q~yp~~~~eIiVVDDgStD~T~~~~d~~i~~~~~~~~~~l~~~~~~~~v~--  215 (802)
T 4hg6_A          141 TVDILVPSYN---EPADMLSVTLAAAKNMIYPARLRTVVLCDDGGTDQRCMSPDPELAQKAQERRRELQQLCRELGVV--  215 (802)
T ss_dssp             CEEEEEECTT---CCHHHHHHHHHHHHTSSCCTTCCEEEEESTTCHHHHHTCSSHHHHHHHHHHHHHHHHHHHHHTCE--
T ss_pred             cEEEEEEECC---CCHHHHHHHHHHHHhccCCCCcEEEEEEECCCCccccccCCHHHHHHHHhhhHHHHHHHHhcCcE--
Confidence            9999999999   99889999999999999999999999999999998853     2333333233455899999999  


Q ss_pred             CCccceeCCCCCCCCCChhhhHHH
Q 022795          182 CPEAYFSDPENGDGDSGNAEFIVE  205 (292)
Q Consensus       182 ~P~~Yf~r~~~~~~kagn~n~a~~  205 (292)
                          |+.++.+.+.|+|++|.+.+
T Consensus       216 ----~i~~~~~~~GKa~alN~gl~  235 (802)
T 4hg6_A          216 ----YSTRERNEHAKAGNMSAALE  235 (802)
T ss_dssp             ----EEECSSCCSHHHHHHHHHHH
T ss_pred             ----EEEecCCCCcchHHHHHHHH
Confidence                99999888889999998776
>1xhb_A Polypeptide N-acetylgalactosaminyltransferase 1; glycosyltransferase-A (GT-A); HET: NAG BMA; 2.50A {Mus musculus} SCOP: b.42.2.1 c.68.1.17 Back     alignment and structure
>1qg8_A Protein (spore coat polysaccharide biosynthesis P SPSA); glycosyltransferase, transferase; 1.50A {Bacillus subtilis} SCOP: c.68.1.1 PDB: 1h7q_A* 1h7l_A 1qgq_A* 1qgs_A* Back     alignment and structure
>3bcv_A Putative glycosyltransferase protein; protein structure initiative II, PSI-II NYSGXRC, structural genomics; 2.35A {Bacteroides fragilis} Back     alignment and structure
>2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A* Back     alignment and structure
>2d7i_A Polypeptide N-acetylgalactosaminyltransferase 10; beta trefoil, rossmann fold; HET: NAG NGA UDP; 2.50A {Homo sapiens} PDB: 2d7r_A* Back     alignment and structure
>3ckj_A Putative uncharacterized protein; mycobacteria, unknown function; HET: CIT; 1.80A {Mycobacterium paratuberculosis} PDB: 3ckn_A* 3cko_A* 3ckq_A* 3ckv_A* 3e26_A 3e25_A Back     alignment and structure
>2ffu_A Ppgalnact-2, polypeptide N-acetylgalactosaminyltransferase 2, protein-UDP; ppgalnact, mucin, glycosyltransferase; HET: UDP; 1.64A {Homo sapiens} PDB: 2ffv_A* Back     alignment and structure
>3l7i_A Teichoic acid biosynthesis protein F; GT-B fold, monotopic membrane protein, structural protein; 2.70A {Staphylococcus epidermidis} PDB: 3l7j_A 3l7k_A* 3l7l_A* 3l7m_A* Back     alignment and structure
>2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A* Back     alignment and structure
>3f1y_A Mannosyl-3-phosphoglycerate synthase; GT-A type glycosyltransferase, GT-81, mannosyl-3-phosphoglyc synthase, GDP-mannose, transferas; 2.20A {Rubrobacter xylanophilus} PDB: 3kia_A* 3o3p_A* Back     alignment and structure
>4fix_A UDP-galactofuranosyl transferase GLFT2; CAZY GT-2 family, glycosyltrans carbohydrate binding, membrane; 2.45A {Mycobacterium tuberculosis} PDB: 4fiy_A* Back     alignment and structure
>2fy7_A Beta-1,4-galactosyltransferase 1; M339H mutant, APO enzyme; HET: PGE; 1.70A {Homo sapiens} PDB: 2aec_A* 2aes_A* 2ae7_A* 2ah9_A* 2agd_A* 2fya_A* 2fyb_A* 3ee5_A* 2fyc_B* 1tw1_A* 1tw5_A* 1tvy_A* 1nmm_B* 1o0r_A* 1yro_B* 1nf5_B* 1nhe_B* 1nkh_B* 1nqi_B* 1nwg_B* ... Back     alignment and structure
>1fo8_A Alpha-1,3-mannosyl-glycoprotein beta-1,2-N- acetylglucosaminyltransferase; methylmercury derivative, N- acetylglucosaminyltransferase I; 1.40A {Oryctolagus cuniculus} SCOP: c.68.1.10 PDB: 1fo9_A 1foa_A* 2apc_A* 2am3_A* 2am4_A* 2am5_A* Back     alignment and structure
>2wvl_A Mannosyl-3-phosphoglycerate synthase; GT-A fold, transferase, glycosyltransferase, retaining mecha glucosyl transferase; HET: GDD; 2.81A {Thermus thermophilus} PDB: 2wvk_A* 2wvm_A* Back     alignment and structure
>2bo4_A Mannosylglycerate synthase; catalysis, glycosyltransferase, mannose, transferase, stereoselectivity; HET: FLC; 1.95A {Rhodothermus marinus} SCOP: c.68.1.18 PDB: 2bo6_A 2bo7_A* 2bo8_A* 2xw2_A 2y4j_A 2xw3_A* 2xw4_A* 2xw5_A* 2y4k_A* 2y4l_A* 2y4m_A* Back     alignment and structure
>2zu9_A Mannosyl-3-phosphoglycerate synthase; GT-A fold, glycosyltransferase, GT55, GDP, cytoplasm, magnesium, transferase; HET: GDP; 2.00A {Pyrococcus horikoshii} PDB: 2zu7_A* 2zu8_A* Back     alignment and structure
>2nxv_A ATP synthase subunits region ORF 6; majastridin, ATPase operon, glycosyl transferase, rossmann F sulphur SAD, transferase; 1.10A {Rhodobacter blasticus} PDB: 2qgi_A* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query292
d1xhba2 328 Polypeptide N-acetylgalactosaminyltransferase 1, N 98.5
d1qg8a_255 Spore coat polysaccharide biosynthesis protein Sps 98.44
d1omza_265 Alpha-1,4-N-acetylhexosaminyltransferase (Alpha-Ga 97.82
d2bo4a1 381 Mannosylglycerate synthase, MGS {Rhodothermus mari 93.58
>d1xhba2 c.68.1.17 (A:95-422) Polypeptide N-acetylgalactosaminyltransferase 1, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: Nucleotide-diphospho-sugar transferases
superfamily: Nucleotide-diphospho-sugar transferases
family: Polypeptide N-acetylgalactosaminyltransferase 1, N-terminal domain
domain: Polypeptide N-acetylgalactosaminyltransferase 1, N-terminal domain
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.50  E-value=7.5e-08  Score=85.75  Aligned_cols=57  Identities=25%  Similarity=0.184  Sum_probs=48.7

Q ss_pred             CCCCCceEEEEecCCCCCCChHHHHHHHHHHhcCCCCCCCcEEEEEcCCCCcccHHHHHH
Q 022795          102 ADQLPGIDVFICTADPTKEPTVEVMNTVLSAMALDYPPEKLHVYLSDDGGASITLLGMRE  161 (292)
Q Consensus       102 ~~~lP~VDVfI~Tynp~~Ep~~vv~~Tvls~lalDYP~~kl~VyVlDDG~s~~T~~~l~e  161 (292)
                      ++++|.|+|+|||||   |....+.+||.|+++..||....+|+|+|||++|.|.....+
T Consensus        18 ~~~~P~vSIIIp~yN---e~~~~l~~~l~Si~~qt~~~~~~EIIvVDdgS~d~~~~~~l~   74 (328)
T d1xhba2          18 PDNLPTTSVVIVFHN---EAWSTLLRTVHSVINRSPRHMIEEIVLVDDASERDFLKRPLE   74 (328)
T ss_dssp             CSCCCCEEEEEEESS---CCHHHHHHHHHHHHHSSCGGGEEEEEEEECSCCCGGGTHHHH
T ss_pred             CCCCCCEEEEEeccC---CcHHHHHHHHHHHHhcCCCCCCeEEEEEECCCChhhHHHHHH
Confidence            467899999999999   877889999999999999965569999999999977654433
>d1qg8a_ c.68.1.1 (A:) Spore coat polysaccharide biosynthesis protein SpsA {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1omza_ c.68.1.15 (A:) Alpha-1,4-N-acetylhexosaminyltransferase (Alpha-GalNAcT EXTL2) {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d2bo4a1 c.68.1.18 (A:2-382) Mannosylglycerate synthase, MGS {Rhodothermus marinus [TaxId: 29549]} Back     information, alignment and structure