Citrus Sinensis ID: 022818

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-
Protein Sequence
MAEASPAAANAELLEWPKKDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRGPTPEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNEDFLKELQSE
Secondary Structure (PSIPRED)
cccccccccccccEEcccccccEEEEEEEEEccHHHHHHHHHHccccEEEEEEEcccccEEEEEEEccccccccEEEEEEcccccccccccccEEEEEEEcHHHHHHHHHHHcccEEEEccccccccccEEEEEEcccccEEEEEEcccccccccccEEEEccHHHHHHHHHHHcccEEEEEEEcccccEEEEEEEccccccccEEEEEEcccccccccccccEEEEEEEccHHHHHHHHHHHHHHcccEEEccccccccccEEEEEEEcccccEEEEEcccccHHHHccc
Secondary Structure Prediction (SSPRO)
cccccccccHHHHHcccccccccEEEEEEEEccHHHHHHHHHHHHccEEEEEcccccccccEEEEccccccccEEEEEEEcccccccccccccEEEEEEcccHHHHHHHHHHccccEEEcccccccccEEEEEEEcccccEEEEEEcccccccccEEEEEEccHHHHHHHHHHHHccEEEEEcccccccEEEEEEEcccccccEEEEEEEcccccEccccccEEEEEEEcccHHHHHHHHHHHHHHcccEEEccccccccccEEEEEEEcccccEEEEEccHHHHHHcccc
Coil and Loop (DISEMBL)
MAEASPAAANAELLewpkkdkrrFLHAVYRVGDLDRTIKFYTECFGmkllrkrdvpeekysnaflgfgpeqSHFVVELTYNygvtsydigtgfghfaIATEDVYKLVENIRAkggnvtrepgplkggtthiafvkdpdgyIFELiqrgptpeplCQVMLRVGDLGRSIKFYEKALGMKLlrtvdkpeyKYTLAMLGYAEEDQTTVLELTYNygvteytkgnAYAQVAISTDDVYKSAEVVNLVTQELggkitrqpgsipglntkitsfvdpdgwktvLVDNEDFLKELQSE
Flexible Loop (DISEMBL)
MAEASPAAANAellewpkkdkrrfLHAVyrvgdldrtiKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIATEDVYKLVENIRAKggnvtrepgplkgGTTHIAFVKDPDGYIFELIQRGPTPEPLCQVMLRVGDLGRSIKFYEKAlgmkllrtvdKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDVYKSAEVVNLVTQelggkitrqpgsipglnTKITsfvdpdgwkTVLVDNEDFLKELQSE
Low Complexity Region (SEG)
MaeaspaaanaelleWPKKDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRGPTPEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNEDFLKELQSE
Disordered region (IsUnstruct)
*************LEWPKKDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRGPTPEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNEDF*******
Disordered Region (DISOPRED)
******A*ANAELLEWPKKDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRGPTPEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNEDFL******
Disordered Region (DISEMBL)
*********NAELLEWPKKDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRGPTPEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNEDFLKELQSE
Disordered Region (DISPRO)
**********AELLEWPKKDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRGPTPEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNEDFLKEL***
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MAEASPAAANAELLEWPKKDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRGPTPEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNEDFLKELQSE
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	291	2.2.26 [Sep-21-2011]
Q39366	282	Putative lactoylglutathio	N/A	no	0.965	0.996	0.815	1e-137
Q948T6	291	Lactoylglutathione lyase	yes	no	0.993	0.993	0.800	1e-135
Q8W593	350	Probable lactoylglutathio	no	no	0.975	0.811	0.725	1e-125
P46235	138	Probable lactoylglutathio	yes	no	0.415	0.876	0.616	2e-41
Q9KT93	138	Probable lactoylglutathio	no	no	0.422	0.891	0.590	5e-40
P0A1Q2	135	Lactoylglutathione lyase	yes	no	0.412	0.888	0.588	3e-38
P0A1Q3	135	Lactoylglutathione lyase	N/A	no	0.412	0.888	0.588	3e-38
P0AC83	135	Lactoylglutathione lyase	yes	no	0.412	0.888	0.588	4e-38
P0AC81	135	Lactoylglutathione lyase	N/A	no	0.412	0.888	0.588	4e-38
P0AC82	135	Lactoylglutathione lyase	N/A	no	0.412	0.888	0.588	4e-38

>sp|Q39366|LGUL_BRAOG Putative lactoylglutathione lyase OS=Brassica oleracea var. gemmifera PE=2 SV=1

 Score =  487 bits (1254), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 230/282 (81%), Positives = 258/282 (91%), Gaps = 1/282 (0%)

Query: 8   AANAELLEWPKKDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGF 67
           A NA+L+EWPKKDKRRFLH VYRVGDLDRTI+FYTECFGMK+LRKRDVPEEKYSNAFLGF
Sbjct: 2   AENADLVEWPKKDKRRFLHVVYRVGDLDRTIQFYTECFGMKVLRKRDVPEEKYSNAFLGF 61

Query: 68  GPEQSHFVVELTYNYGVTSYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGG 127
           GPE S+FVVELTYNYGV+SYDIGTGFGHFAI+T+DV K+VE +RAKGGNVTREPGP+KGG
Sbjct: 62  GPETSNFVVELTYNYGVSSYDIGTGFGHFAISTQDVSKMVEAVRAKGGNVTREPGPVKGG 121

Query: 128 TTHIAFVKDPDGYIFELIQRGPTPEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPE 187
            + IAFVKDPDGY FELIQRGPTPEPLCQVMLRVGDL R++KF EKALGM+LLR +++PE
Sbjct: 122 GSVIAFVKDPDGYTFELIQRGPTPEPLCQVMLRVGDLDRAVKFMEKALGMRLLRRIERPE 181

Query: 188 YKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDVYKSAEVVNLVTQEL 247
           Y  T+ M+GYAEE ++ VLELTYNYGVTEYTKGNAYAQ+AI TDDVYKSAEVV +V QEL
Sbjct: 182 YN-TIGMMGYAEEYESIVLELTYNYGVTEYTKGNAYAQIAIGTDDVYKSAEVVKIVNQEL 240

Query: 248 GGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNEDFLKELQ 289
           GGKITR+ G +PGL TKI SF+DPDGWK VLVDNEDFLKEL+
Sbjct: 241 GGKITREAGPLPGLGTKIVSFLDPDGWKQVLVDNEDFLKELE 282

Catalyzes the conversion of hemimercaptal, formed from methylglyoxal and glutathione, to S-lactoylglutathione.
Brassica oleracea var. gemmifera (taxid: 178616)
EC: 4EC: .EC: 4EC: .EC: 1EC: .EC: 5

>sp|Q948T6|LGUL_ORYSJ Lactoylglutathione lyase OS=Oryza sativa subsp. japonica GN=GLX-I PE=1 SV=2

 Score =  483 bits (1242), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 233/291 (80%), Positives = 256/291 (87%), Gaps = 2/291 (0%)

Query: 1   MAEASPAAANAEL-LEWPKKDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEK 59
           MA  S A  + E+ LEWPKKDK+R LHAVYRVGDLDRTIK YTECFGMKLLRKRDVPEEK
Sbjct: 1   MASGSEAEKSPEVVLEWPKKDKKRLLHAVYRVGDLDRTIKCYTECFGMKLLRKRDVPEEK 60

Query: 60  YSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIATEDVYKLVENIRAKGG-NVT 118
           Y+NAFLGFGPE ++F +ELTYNYGV  YDIG GFGHFAIATEDVYKL E I++     +T
Sbjct: 61  YTNAFLGFGPEDTNFALELTYNYGVDKYDIGAGFGHFAIATEDVYKLAEKIKSSCCCKIT 120

Query: 119 REPGPLKGGTTHIAFVKDPDGYIFELIQRGPTPEPLCQVMLRVGDLGRSIKFYEKALGMK 178
           REPGP+KGG+T IAF +DPDGY+FELIQRGPTPEPLCQVMLRVGDL RSIKFYEKALGMK
Sbjct: 121 REPGPVKGGSTVIAFAQDPDGYMFELIQRGPTPEPLCQVMLRVGDLDRSIKFYEKALGMK 180

Query: 179 LLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDVYKSAE 238
           LLR  D P+YKYT+AMLGYA+ED+TTV+ELTYNYGVTEYTKGNAYAQVAI T+DVYKSAE
Sbjct: 181 LLRKKDVPDYKYTIAMLGYADEDKTTVIELTYNYGVTEYTKGNAYAQVAIGTEDVYKSAE 240

Query: 239 VVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNEDFLKELQ 289
            V LVT+ELGGKI RQPG +PGLNTKI SF+DPDGWK VLVDN DFLKELQ
Sbjct: 241 AVELVTKELGGKILRQPGPLPGLNTKIASFLDPDGWKVVLVDNADFLKELQ 291

Catalyzes the conversion of hemimercaptal, formed from methylglyoxal and glutathione, to S-lactoylglutathione.

Oryza sativa subsp. japonica (taxid: 39947)

EC: 4

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 5

>sp|Q8W593|LGUC_ARATH Probable lactoylglutathione lyase, chloroplast OS=Arabidopsis thaliana GN=At1g67280 PE=2 SV=1

 Score =  447 bits (1149), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 209/288 (72%), Positives = 242/288 (84%), Gaps = 4/288 (1%)

Query: 2   AEASPAAANAELLEWPKKDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYS 61
            +A+ A    +LL W K DKRR LH VYRVGD+DRTIKFYTEC GMKLLRKRD+PEEKY+
Sbjct: 67  GKAAQATTQDDLLTWVKNDKRRMLHVVYRVGDMDRTIKFYTECLGMKLLRKRDIPEEKYT 126

Query: 62  NAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREP 121
           NAFLG+GPE SHFV+ELTYNYGV  YDIG GFGHF IA +DV K VE ++AKGG V+REP
Sbjct: 127 NAFLGYGPEDSHFVIELTYNYGVDKYDIGAGFGHFGIAVDDVAKTVELVKAKGGKVSREP 186

Query: 122 GPLKGGTTHIAFVKDPDGYIFELIQRGPTPEPLCQVMLRVGDLGRSIKFYEKALGMKLLR 181
           GP+KGG T IAF++DPDGY FEL++RGPTPEPLCQVMLRVGDL R+IKFYEKA GM+LLR
Sbjct: 187 GPVKGGKTVIAFIEDPDGYKFELLERGPTPEPLCQVMLRVGDLDRAIKFYEKAFGMELLR 246

Query: 182 TVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDVYKSAEVVN 241
           T D PEYKYT+AM+GY  ED+  VLELTYNYGVTEY KGNAYAQ+AI TDDVYK+AE + 
Sbjct: 247 TRDNPEYKYTIAMMGYGPEDKFPVLELTYNYGVTEYDKGNAYAQIAIGTDDVYKTAEAIK 306

Query: 242 LVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNEDFLKELQ 289
           L     GGKITR+PG +PG++TKIT+ +DPDGWK+V VDN DFLKEL+
Sbjct: 307 L----FGGKITREPGPLPGISTKITACLDPDGWKSVFVDNIDFLKELE 350

Catalyzes the conversion of hemimercaptal, formed from methylglyoxal and glutathione, to S-lactoylglutathione.

Arabidopsis thaliana (taxid: 3702)

EC: 4

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 5

>sp|P46235|LGUL_VIBPA Probable lactoylglutathione lyase OS=Vibrio parahaemolyticus serotype O3:K6 (strain RIMD 2210633) GN=gloA PE=3 SV=2

 Score =  169 bits (429), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 77/125 (61%), Positives = 95/125 (76%)

Query: 23  RFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNY 82
           R LH + RVGDLD++IKFYTE  GM+LLR  +  E +Y+ AF+G+G E    V+ELTYN+
Sbjct: 5   RILHTMLRVGDLDKSIKFYTEVMGMQLLRTNENKEYEYTLAFVGYGDESQGAVIELTYNW 64

Query: 83  GVTSYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIF 142
           G T YD+GT FGH AI  +D+Y   + I+A GGNVTRE GP+KGGTTHIAFVKDPDGY+ 
Sbjct: 65  GKTEYDLGTAFGHIAIGVDDIYATCDAIKAAGGNVTREAGPVKGGTTHIAFVKDPDGYMI 124

Query: 143 ELIQR 147
           ELIQ 
Sbjct: 125 ELIQN 129

Catalyzes the conversion of hemimercaptal, formed from methylglyoxal and glutathione, to S-lactoylglutathione.

Vibrio parahaemolyticus (taxid: 670)

EC: 4

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 5

>sp|Q9KT93|LGUL_VIBCH Probable lactoylglutathione lyase OS=Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961) GN=gloA PE=3 SV=2

 Score =  164 bits (416), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 75/127 (59%), Positives = 93/127 (73%)

Query: 21  KRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTY 80
             R LH + RVGDLD++I+FYT+  GM LLRK +  E KY+ AFLG+G E    V+ELTY
Sbjct: 3   NHRILHTMLRVGDLDKSIEFYTQVMGMSLLRKNENTEYKYTLAFLGYGDESQGAVIELTY 62

Query: 81  NYGVTSYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGY 140
           N+GV  Y+ G  +GH AI  +D+Y   + I+A GG VTREPGP+KGGTTHIAFVKDPDGY
Sbjct: 63  NWGVADYEKGNAYGHIAIGVDDIYATCDTIKAAGGIVTREPGPVKGGTTHIAFVKDPDGY 122

Query: 141 IFELIQR 147
           + ELIQ 
Sbjct: 123 MIELIQN 129

Catalyzes the conversion of hemimercaptal, formed from methylglyoxal and glutathione, to S-lactoylglutathione.

Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961) (taxid: 243277)

EC: 4

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 5

>sp|P0A1Q2|LGUL_SALTY Lactoylglutathione lyase OS=Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) GN=gloA PE=3 SV=1

 Score =  159 bits (401), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 73/124 (58%), Positives = 91/124 (73%)

Query: 23  RFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNY 82
           R LH + RVGDL R+I FYT   GMKLLR  + PE KYS AF+G+GPE    V+ELTYN+
Sbjct: 2   RLLHTMLRVGDLQRSIAFYTNVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNW 61

Query: 83  GVTSYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIF 142
           GV SYD+G  +GH A++ ++  +  E IR  GGNVTRE GP+KGG+T IAFV+DPDGY  
Sbjct: 62  GVESYDMGNAYGHIALSVDNAAEACERIRQNGGNVTREAGPVKGGSTIIAFVEDPDGYKI 121

Query: 143 ELIQ 146
           ELI+
Sbjct: 122 ELIE 125

Catalyzes the conversion of hemimercaptal, formed from methylglyoxal and glutathione, to S-lactoylglutathione.

Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) (taxid: 99287)

EC: 4

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 5

>sp|P0A1Q3|LGUL_SALTI Lactoylglutathione lyase OS=Salmonella typhi GN=gloA PE=3 SV=1

 Score =  159 bits (401), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 73/124 (58%), Positives = 91/124 (73%)

Query: 23  RFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNY 82
           R LH + RVGDL R+I FYT   GMKLLR  + PE KYS AF+G+GPE    V+ELTYN+
Sbjct: 2   RLLHTMLRVGDLQRSIAFYTNVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNW 61

Query: 83  GVTSYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIF 142
           GV SYD+G  +GH A++ ++  +  E IR  GGNVTRE GP+KGG+T IAFV+DPDGY  
Sbjct: 62  GVESYDMGNAYGHIALSVDNAAEACERIRQNGGNVTREAGPVKGGSTIIAFVEDPDGYKI 121

Query: 143 ELIQ 146
           ELI+
Sbjct: 122 ELIE 125

Catalyzes the conversion of hemimercaptal, formed from methylglyoxal and glutathione, to S-lactoylglutathione.

Salmonella typhi (taxid: 90370)

EC: 4

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 5

>sp|P0AC83|LGUL_SHIFL Lactoylglutathione lyase OS=Shigella flexneri GN=gloA PE=3 SV=1

 Score =  158 bits (399), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 73/124 (58%), Positives = 92/124 (74%)

Query: 23  RFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNY 82
           R LH + RVGDL R+I FYT+  GMKLLR  + PE KYS AF+G+GPE    V+ELTYN+
Sbjct: 2   RLLHTMLRVGDLQRSIDFYTKVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNW 61

Query: 83  GVTSYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIF 142
           GV  Y++GT +GH A++ ++  +  E IR  GGNVTRE GP+KGGTT IAFV+DPDGY  
Sbjct: 62  GVDKYELGTAYGHIALSVDNAAEACEKIRQNGGNVTREAGPVKGGTTVIAFVEDPDGYKI 121

Query: 143 ELIQ 146
           ELI+
Sbjct: 122 ELIE 125

Catalyzes the conversion of hemimercaptal, formed from methylglyoxal and glutathione, to S-lactoylglutathione.

Shigella flexneri (taxid: 623)

EC: 4

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 5

>sp|P0AC81|LGUL_ECOLI Lactoylglutathione lyase OS=Escherichia coli (strain K12) GN=gloA PE=1 SV=1

 Score =  158 bits (399), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 73/124 (58%), Positives = 92/124 (74%)

Query: 23  RFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNY 82
           R LH + RVGDL R+I FYT+  GMKLLR  + PE KYS AF+G+GPE    V+ELTYN+
Sbjct: 2   RLLHTMLRVGDLQRSIDFYTKVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNW 61

Query: 83  GVTSYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIF 142
           GV  Y++GT +GH A++ ++  +  E IR  GGNVTRE GP+KGGTT IAFV+DPDGY  
Sbjct: 62  GVDKYELGTAYGHIALSVDNAAEACEKIRQNGGNVTREAGPVKGGTTVIAFVEDPDGYKI 121

Query: 143 ELIQ 146
           ELI+
Sbjct: 122 ELIE 125

Catalyzes the conversion of hemimercaptal, formed from methylglyoxal and glutathione, to S-lactoylglutathione.

Escherichia coli (strain K12) (taxid: 83333)

EC: 4

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 5

>sp|P0AC82|LGUL_ECO57 Lactoylglutathione lyase OS=Escherichia coli O157:H7 GN=gloA PE=3 SV=1

 Score =  158 bits (399), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 73/124 (58%), Positives = 92/124 (74%)

Query: 23  RFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNY 82
           R LH + RVGDL R+I FYT+  GMKLLR  + PE KYS AF+G+GPE    V+ELTYN+
Sbjct: 2   RLLHTMLRVGDLQRSIDFYTKVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNW 61

Query: 83  GVTSYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIF 142
           GV  Y++GT +GH A++ ++  +  E IR  GGNVTRE GP+KGGTT IAFV+DPDGY  
Sbjct: 62  GVDKYELGTAYGHIALSVDNAAEACEKIRQNGGNVTREAGPVKGGTTVIAFVEDPDGYKI 121

Query: 143 ELIQ 146
           ELI+
Sbjct: 122 ELIE 125

Catalyzes the conversion of hemimercaptal, formed from methylglyoxal and glutathione, to S-lactoylglutathione.

Escherichia coli O157:H7 (taxid: 83334)

EC: 4

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 5

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	291
2213425	291	hypothetical protein [Citrus x paradisi]	1.0	1.0	0.996	1e-168
211906514	289	lactoylglutathione lyase [Gossypium hirs	0.993	1.0	0.865	1e-148
359483362	292	PREDICTED: lactoylglutathione lyase [Vit	1.0	0.996	0.859	1e-148
356531939	296	PREDICTED: putative lactoylglutathione l	0.986	0.969	0.868	1e-147
356555674	287	PREDICTED: putative lactoylglutathione l	0.986	1.0	0.875	1e-147
224078584	294	predicted protein [Populus trichocarpa]	1.0	0.989	0.870	1e-147
449433964	292	PREDICTED: putative lactoylglutathione l	1.0	0.996	0.852	1e-145
255554865	280	lactoylglutathione lyase, putative [Rici	0.938	0.975	0.901	1e-142
388520197	284	unknown [Lotus japonicus]	0.962	0.985	0.860	1e-142
312281931	289	unnamed protein product [Thellungiella h	0.993	1.0	0.826	1e-141

>gi|2213425|emb|CAB09799.1| hypothetical protein [Citrus x paradisi]

 Score =  598 bits (1541), Expect = e-168,   Method: Compositional matrix adjust.
 Identities = 290/291 (99%), Positives = 291/291 (100%)

Query: 1   MAEASPAAANAELLEWPKKDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKY 60
           MAEASPAAANAELLEWPKKDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKY
Sbjct: 1   MAEASPAAANAELLEWPKKDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKY 60

Query: 61  SNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTRE 120
           SNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTRE
Sbjct: 61  SNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTRE 120

Query: 121 PGPLKGGTTHIAFVKDPDGYIFELIQRGPTPEPLCQVMLRVGDLGRSIKFYEKALGMKLL 180
           PGPLKGGTTHIAFVKDPDGYIFELIQRGPTPEPLCQVMLRVGDLGRSIKFYEKALGMKLL
Sbjct: 121 PGPLKGGTTHIAFVKDPDGYIFELIQRGPTPEPLCQVMLRVGDLGRSIKFYEKALGMKLL 180

Query: 181 RTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDVYKSAEVV 240
           RTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDVYKSAEVV
Sbjct: 181 RTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDVYKSAEVV 240

Query: 241 NLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNEDFLKELQSE 291
           NLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNEDFLKE+QSE
Sbjct: 241 NLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNEDFLKEIQSE 291

Source: Citrus x paradisi

Species: Citrus x paradisi

Genus: Citrus

Family: Rutaceae

Order: Sapindales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|211906514|gb|ACJ11750.1| lactoylglutathione lyase [Gossypium hirsutum]

 Score =  530 bits (1364), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 250/289 (86%), Positives = 272/289 (94%)

Query: 1   MAEASPAAANAELLEWPKKDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKY 60
           MAE S A  + ELLEWPKKDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRD+PEEKY
Sbjct: 1   MAEGSAAVPSTELLEWPKKDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDIPEEKY 60

Query: 61  SNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTRE 120
           SNAFLGFGPE+SHFVVELTYNYGVTSYDIGTGFGHFAIAT DVYK+VE+IRAKGGN+TRE
Sbjct: 61  SNAFLGFGPEESHFVVELTYNYGVTSYDIGTGFGHFAIATPDVYKMVEDIRAKGGNITRE 120

Query: 121 PGPLKGGTTHIAFVKDPDGYIFELIQRGPTPEPLCQVMLRVGDLGRSIKFYEKALGMKLL 180
           PGP+KGG++ IAFVKDPDGYIFELIQR  TPEPLCQVMLRVGDL RS+KFYEKALGMKL+
Sbjct: 121 PGPVKGGSSVIAFVKDPDGYIFELIQRASTPEPLCQVMLRVGDLDRSVKFYEKALGMKLV 180

Query: 181 RTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDVYKSAEVV 240
           + VD+PEYKY++AM+GYAEE +TTVLELTYNYGVTEYTKGNAYAQVAISTDDVYKS EVV
Sbjct: 181 KKVDRPEYKYSIAMMGYAEEHETTVLELTYNYGVTEYTKGNAYAQVAISTDDVYKSGEVV 240

Query: 241 NLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNEDFLKELQ 289
             V QELGGK+TR+PG IPG+NTKITSF+DPDGWKTVLVDNEDFLKEL+
Sbjct: 241 EHVIQELGGKVTRKPGPIPGINTKITSFLDPDGWKTVLVDNEDFLKELK 289

Source: Gossypium hirsutum

Species: Gossypium hirsutum

Genus: Gossypium

Family: Malvaceae

Order: Malvales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359483362|ref|XP_002273346.2| PREDICTED: lactoylglutathione lyase [Vitis vinifera] gi|302144130|emb|CBI23235.3| unnamed protein product [Vitis vinifera]

 Score =  529 bits (1363), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 250/291 (85%), Positives = 273/291 (93%)

Query: 1   MAEASPAAANAELLEWPKKDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKY 60
           MAEA+P   + ELLEWPKKDKRRFLH VYRVGDLDRTIKFYTECFGMKLLRKRD+PEEKY
Sbjct: 1   MAEAAPVVPSDELLEWPKKDKRRFLHVVYRVGDLDRTIKFYTECFGMKLLRKRDIPEEKY 60

Query: 61  SNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTRE 120
           +NAFLGFGPE+++FVVELTYNYGV  YDIGTGFGHFAIAT+DVYK+VE+IRAKGG +TRE
Sbjct: 61  TNAFLGFGPEETNFVVELTYNYGVDKYDIGTGFGHFAIATQDVYKMVEDIRAKGGIITRE 120

Query: 121 PGPLKGGTTHIAFVKDPDGYIFELIQRGPTPEPLCQVMLRVGDLGRSIKFYEKALGMKLL 180
           PGP+KGG + IAF KDPDGYIFELIQRGPTPEPLCQVMLRVGDL RSIKFYEKALGMK++
Sbjct: 121 PGPVKGGKSVIAFAKDPDGYIFELIQRGPTPEPLCQVMLRVGDLERSIKFYEKALGMKMV 180

Query: 181 RTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDVYKSAEVV 240
           +  D+PEYKY++AM+GYAEE +TTVLELTYNYGVTEYTKGNAYAQVAISTDDVYKSAEVV
Sbjct: 181 KKTDRPEYKYSIAMMGYAEEHETTVLELTYNYGVTEYTKGNAYAQVAISTDDVYKSAEVV 240

Query: 241 NLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNEDFLKELQSE 291
           NLVT+ELGGKITRQPG IPGLNTKITSF+DPDGWKTVLVDNEDFLKEL  E
Sbjct: 241 NLVTKELGGKITRQPGPIPGLNTKITSFLDPDGWKTVLVDNEDFLKELHKE 291

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356531939|ref|XP_003534533.1| PREDICTED: putative lactoylglutathione lyase-like [Glycine max]

 Score =  528 bits (1360), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 251/289 (86%), Positives = 272/289 (94%), Gaps = 2/289 (0%)

Query: 1   MAEASPAAANAELLEWPKKDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKY 60
           MAEA+   +NAELLEWPKKDKRRFLH VYRVGDLDRTIKFYTECFGMKLLRKRD+PEEKY
Sbjct: 10  MAEAT--QSNAELLEWPKKDKRRFLHVVYRVGDLDRTIKFYTECFGMKLLRKRDIPEEKY 67

Query: 61  SNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTRE 120
           +NAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIAT DVYKLVE+IRAKGGN+TRE
Sbjct: 68  ANAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIATPDVYKLVEDIRAKGGNITRE 127

Query: 121 PGPLKGGTTHIAFVKDPDGYIFELIQRGPTPEPLCQVMLRVGDLGRSIKFYEKALGMKLL 180
           PGP+KGG + IAFVKDPDGY FELIQR  TPEPLCQVMLRVGDL RSIKFYEK LG++++
Sbjct: 128 PGPVKGGKSVIAFVKDPDGYAFELIQRSSTPEPLCQVMLRVGDLERSIKFYEKTLGLRVV 187

Query: 181 RTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDVYKSAEVV 240
           +  D+PEYKYT+AMLGYAEE +TTVLELTYNYGVTEYTKGNAYAQVAI TDDVYKSAEVV
Sbjct: 188 KKTDRPEYKYTIAMLGYAEEHETTVLELTYNYGVTEYTKGNAYAQVAIGTDDVYKSAEVV 247

Query: 241 NLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNEDFLKELQ 289
           N+VTQELGGKITRQPG +PGLNTKITSF+DPDGWKTVLVDN+DFLKEL+
Sbjct: 248 NIVTQELGGKITRQPGPVPGLNTKITSFLDPDGWKTVLVDNQDFLKELE 296

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356555674|ref|XP_003546155.1| PREDICTED: putative lactoylglutathione lyase-like [Glycine max]

 Score =  527 bits (1358), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 253/289 (87%), Positives = 273/289 (94%), Gaps = 2/289 (0%)

Query: 1   MAEASPAAANAELLEWPKKDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKY 60
           MAEA+   +NAELLEWPKKDKRRFLH VYRVGDLDRTIKFYTECFGMKLLRKRD+PEEKY
Sbjct: 1   MAEAT--QSNAELLEWPKKDKRRFLHVVYRVGDLDRTIKFYTECFGMKLLRKRDIPEEKY 58

Query: 61  SNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTRE 120
           +NAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIAT DVYKLVE+IRAKGGNVTRE
Sbjct: 59  ANAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIATPDVYKLVEDIRAKGGNVTRE 118

Query: 121 PGPLKGGTTHIAFVKDPDGYIFELIQRGPTPEPLCQVMLRVGDLGRSIKFYEKALGMKLL 180
           PGP+KGG + IAFVKDPDGY FELIQR  TPEPLCQVMLRVGDL RSIKFYEKALG++++
Sbjct: 119 PGPVKGGKSVIAFVKDPDGYAFELIQRPSTPEPLCQVMLRVGDLERSIKFYEKALGLRVV 178

Query: 181 RTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDVYKSAEVV 240
           +  D+PEYKYT+AMLGYAEE +TTVLELTYNYGVTEYTKGNAYAQVAI TDDVYKSAEVV
Sbjct: 179 KKTDRPEYKYTIAMLGYAEEHETTVLELTYNYGVTEYTKGNAYAQVAIGTDDVYKSAEVV 238

Query: 241 NLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNEDFLKELQ 289
           N+VTQELGGKITRQPG IPGLNTKIT+F+DPDGWKTVLVDN+DFLKEL+
Sbjct: 239 NIVTQELGGKITRQPGPIPGLNTKITAFLDPDGWKTVLVDNQDFLKELE 287

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224078584|ref|XP_002305564.1| predicted protein [Populus trichocarpa] gi|222848528|gb|EEE86075.1| predicted protein [Populus trichocarpa]

 Score =  527 bits (1357), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 255/293 (87%), Positives = 272/293 (92%), Gaps = 2/293 (0%)

Query: 1   MAEASPAAA--NAELLEWPKKDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEE 58
           MAE +  A   NAELLEWPKKDKRR LHAVYRVGDLDRTIKFYTE FGMKLLR RD+PEE
Sbjct: 1   MAEEAAKAVTPNAELLEWPKKDKRRLLHAVYRVGDLDRTIKFYTEGFGMKLLRHRDIPEE 60

Query: 59  KYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIATEDVYKLVENIRAKGGNVT 118
           KYSNAFLGFGPE+S+FVVELTYNYGVTSYDIG GFGHFAIATEDVYKLVE +RA GGN+T
Sbjct: 61  KYSNAFLGFGPEESNFVVELTYNYGVTSYDIGEGFGHFAIATEDVYKLVEKLRALGGNIT 120

Query: 119 REPGPLKGGTTHIAFVKDPDGYIFELIQRGPTPEPLCQVMLRVGDLGRSIKFYEKALGMK 178
           REPGP+KGG + IAFVKDPDGY FELIQRGPTPEPLCQ+MLRVGDL RSIKFYEKALGMK
Sbjct: 121 REPGPVKGGASVIAFVKDPDGYAFELIQRGPTPEPLCQLMLRVGDLDRSIKFYEKALGMK 180

Query: 179 LLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDVYKSAE 238
           LLR +D+PEYKYTLAM+GYA+E +TTVLELTYNYGVTEYTKGNAYAQVAISTDDVYKSAE
Sbjct: 181 LLRKIDRPEYKYTLAMMGYADEYETTVLELTYNYGVTEYTKGNAYAQVAISTDDVYKSAE 240

Query: 239 VVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNEDFLKELQSE 291
           VVNLVTQELGGKITRQPG IPG+NTKITSF+DPDGWK+VLVDNEDFLKEL  E
Sbjct: 241 VVNLVTQELGGKITRQPGPIPGINTKITSFLDPDGWKSVLVDNEDFLKELHKE 293

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449433964|ref|XP_004134766.1| PREDICTED: putative lactoylglutathione lyase-like [Cucumis sativus] gi|449479479|ref|XP_004155610.1| PREDICTED: putative lactoylglutathione lyase-like [Cucumis sativus]

 Score =  520 bits (1338), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 249/292 (85%), Positives = 272/292 (93%), Gaps = 1/292 (0%)

Query: 1   MAEASPA-AANAELLEWPKKDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEK 59
           MAEA+ + A NAELLEWPKKDKRRFLH VYRVGDLDRTIKFYTECFGMKLLRKRDVPEEK
Sbjct: 1   MAEAAASLAPNAELLEWPKKDKRRFLHVVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEK 60

Query: 60  YSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTR 119
           YSNAFLGFGPE S+FVVELTYNYGV+SYDIG+GFGHFAIAT+DVYKLVE+IRAKGG +TR
Sbjct: 61  YSNAFLGFGPEDSNFVVELTYNYGVSSYDIGSGFGHFAIATQDVYKLVEDIRAKGGIITR 120

Query: 120 EPGPLKGGTTHIAFVKDPDGYIFELIQRGPTPEPLCQVMLRVGDLGRSIKFYEKALGMKL 179
           EPGP+KGG++ IAF KDPDGYIFELIQRGPTPEPLCQVMLRVGDL RSIKFY+KALGM+L
Sbjct: 121 EPGPVKGGSSVIAFAKDPDGYIFELIQRGPTPEPLCQVMLRVGDLERSIKFYDKALGMRL 180

Query: 180 LRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDVYKSAEV 239
           L+ VD+PEYKYTLAM+GYA+E +TTVLELTYNYGVTEYTKGNAYAQVAI TDDVYKSAEV
Sbjct: 181 LKKVDRPEYKYTLAMMGYADEPETTVLELTYNYGVTEYTKGNAYAQVAIGTDDVYKSAEV 240

Query: 240 VNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNEDFLKELQSE 291
           VN V QELGGKITRQPG +PG+ TKI SF+DPDGWKTVLVDN DF KEL ++
Sbjct: 241 VNQVNQELGGKITRQPGPLPGIGTKIVSFLDPDGWKTVLVDNADFQKELDNQ 292

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255554865|ref|XP_002518470.1| lactoylglutathione lyase, putative [Ricinus communis] gi|223542315|gb|EEF43857.1| lactoylglutathione lyase, putative [Ricinus communis]

 Score =  511 bits (1317), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 246/273 (90%), Positives = 260/273 (95%)

Query: 4   ASPAAANAELLEWPKKDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNA 63
           A   A NA++LEWPKKDKRR LHAVYRVGDLDRTIKFYTECFGMKLLRKRD+PEEKYSNA
Sbjct: 3   AEATAPNADVLEWPKKDKRRLLHAVYRVGDLDRTIKFYTECFGMKLLRKRDIPEEKYSNA 62

Query: 64  FLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGP 123
           FLGFGPE+++FVVELTYNYGVTSYDIGTGFGHFAIAT+DVYKLVE + AKGG VTREPGP
Sbjct: 63  FLGFGPEETNFVVELTYNYGVTSYDIGTGFGHFAIATQDVYKLVEEVLAKGGAVTREPGP 122

Query: 124 LKGGTTHIAFVKDPDGYIFELIQRGPTPEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTV 183
           +KGGTT IAFVKDPDGYIFELIQRGPTPEPLCQVMLRVGDL RSI+FYEKALGMKLLR V
Sbjct: 123 VKGGTTVIAFVKDPDGYIFELIQRGPTPEPLCQVMLRVGDLDRSIRFYEKALGMKLLRKV 182

Query: 184 DKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDVYKSAEVVNLV 243
           DKPEYKYTLAM+GYA+E +TTVLELTYNYGVTEYTKGNAYAQVAISTDDVYKSAEVVNLV
Sbjct: 183 DKPEYKYTLAMMGYADEYETTVLELTYNYGVTEYTKGNAYAQVAISTDDVYKSAEVVNLV 242

Query: 244 TQELGGKITRQPGSIPGLNTKITSFVDPDGWKT 276
           TQELGGKITRQPG IPGLNTKITSF+DPDGWKT
Sbjct: 243 TQELGGKITRQPGPIPGLNTKITSFLDPDGWKT 275

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388520197|gb|AFK48160.1| unknown [Lotus japonicus]

 Score =  511 bits (1315), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 241/280 (86%), Positives = 262/280 (93%)

Query: 10  NAELLEWPKKDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGP 69
           NAELL+W KKDKRRFLHAVYRVGDLDRTIKFYTECFGM+LLRKRD+PEEKY+NAFLGFG 
Sbjct: 5   NAELLDWSKKDKRRFLHAVYRVGDLDRTIKFYTECFGMQLLRKRDIPEEKYANAFLGFGS 64

Query: 70  EQSHFVVELTYNYGVTSYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTT 129
           EQSHFVVELTYNYGVTSYDIGTGFGHFAIAT DVYK VE++RAKGGNVTREPGP+KGG+T
Sbjct: 65  EQSHFVVELTYNYGVTSYDIGTGFGHFAIATPDVYKFVEDVRAKGGNVTREPGPVKGGST 124

Query: 130 HIAFVKDPDGYIFELIQRGPTPEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYK 189
            IAFVKDPDGY+FE+IQR  TPEPLCQVMLRVGDL RSIKFYEKALG+K+++  D+PE K
Sbjct: 125 VIAFVKDPDGYLFEIIQRASTPEPLCQVMLRVGDLERSIKFYEKALGLKVVKKTDRPEQK 184

Query: 190 YTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGG 249
           YT+AMLGYAEE +T VLELTYNYGVTEYTKGNAYAQVAI TDDVYKSAE+VNL TQE GG
Sbjct: 185 YTIAMLGYAEEHETIVLELTYNYGVTEYTKGNAYAQVAIGTDDVYKSAELVNLATQEFGG 244

Query: 250 KITRQPGSIPGLNTKITSFVDPDGWKTVLVDNEDFLKELQ 289
           KITRQPG IPGLNTKI SF+DPDGWKTVLVDN+DFLKEL+
Sbjct: 245 KITRQPGPIPGLNTKIASFLDPDGWKTVLVDNQDFLKELE 284

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|312281931|dbj|BAJ33831.1| unnamed protein product [Thellungiella halophila]

 Score =  508 bits (1307), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 239/289 (82%), Positives = 264/289 (91%)

Query: 1   MAEASPAAANAELLEWPKKDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKY 60
           MAEAS  A NAELL+WPKKD RRFLH VYRVGDLDRTI+FYTECFGMKLLRKRDVPEEKY
Sbjct: 1   MAEASAVAPNAELLDWPKKDNRRFLHVVYRVGDLDRTIEFYTECFGMKLLRKRDVPEEKY 60

Query: 61  SNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTRE 120
           SNAFLGFGPE S+FVVELTYNYGV+SYDIGTGFGHFAI+T+DV K+VE +RAKGGNVTRE
Sbjct: 61  SNAFLGFGPETSNFVVELTYNYGVSSYDIGTGFGHFAISTQDVSKMVETVRAKGGNVTRE 120

Query: 121 PGPLKGGTTHIAFVKDPDGYIFELIQRGPTPEPLCQVMLRVGDLGRSIKFYEKALGMKLL 180
           PGP+KGG + IAFVKDPDGY FELIQRGPTPEPLCQVMLR GDL R+IKFYEKALGM+LL
Sbjct: 121 PGPVKGGNSVIAFVKDPDGYAFELIQRGPTPEPLCQVMLRTGDLDRAIKFYEKALGMRLL 180

Query: 181 RTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDVYKSAEVV 240
           R +++PEYKYT+ M+GYAEE +T VLELTYNYGVTEYTKGNAYAQ+AI TDDVYKS EVV
Sbjct: 181 RRIERPEYKYTIGMMGYAEEYETIVLELTYNYGVTEYTKGNAYAQIAIGTDDVYKSGEVV 240

Query: 241 NLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNEDFLKELQ 289
            +V QELGGKITR+ G +PGL TKI SF+DPDGWKTVLVDN+DFLKEL+
Sbjct: 241 KIVNQELGGKITREAGPLPGLGTKIVSFLDPDGWKTVLVDNKDFLKELE 289

Source: Thellungiella halophila

Species: Eutrema halophilum

Genus: Eutrema

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	291
TAIR|locus:2019574	350	AT1G67280 [Arabidopsis thalian	0.927	0.771	0.748	3.5e-114
UNIPROTKB|Q9KT93	138	gloA "Probable lactoylglutathi	0.426	0.898	0.604	2.1e-38
TIGR_CMR|VC_1010	138	VC_1010 "lactoylglutathione ly	0.426	0.898	0.604	2.1e-38
UNIPROTKB|P0AC81	135	gloA "GloA" [Escherichia coli	0.426	0.918	0.588	1.3e-36
TIGR_CMR|SO_2044	136	SO_2044 "lactoylglutathione ly	0.426	0.911	0.584	1.5e-35
DICTYBASE|DDB_G0291265	136	gloA "glyoxylase I" [Dictyoste	0.426	0.911	0.548	3.2e-33
ASPGD|ASPL0000011175	318	AN4174 [Emericella nidulans (t	0.721	0.660	0.297	1.9e-26
POMBASE|SPBC12C2.12c	302	glo1 "glyoxalase I" [Schizosac	0.529	0.509	0.338	1.3e-24
RGD|1307010	298	Glod4 "glyoxalase domain conta	0.838	0.818	0.299	7.8e-23
UNIPROTKB|Q9HC38	313	GLOD4 "Glyoxalase domain-conta	0.711	0.661	0.296	1.4e-22

TAIR|locus:2019574 AT1G67280 [Arabidopsis thaliana (taxid:3702)]

 Score = 1126 (401.4 bits), Expect = 3.5e-114, P = 3.5e-114
 Identities = 205/274 (74%), Positives = 235/274 (85%)

Query:    16 WPKKDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFV 75
             W K DKRR LH VYRVGD+DRTIKFYTEC GMKLLRKRD+PEEKY+NAFLG+GPE SHFV
Sbjct:    81 WVKNDKRRMLHVVYRVGDMDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFV 140

Query:    76 VELTYNYGVTSYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVK 135
             +ELTYNYGV  YDIG GFGHF IA +DV K VE ++AKGG V+REPGP+KGG T IAF++
Sbjct:   141 IELTYNYGVDKYDIGAGFGHFGIAVDDVAKTVELVKAKGGKVSREPGPVKGGKTVIAFIE 200

Query:   136 DPDGYIFELIQRGPTPEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAML 195
             DPDGY FEL++RGPTPEPLCQVMLRVGDL R+IKFYEKA GM+LLRT D PEYKYT+AM+
Sbjct:   201 DPDGYKFELLERGPTPEPLCQVMLRVGDLDRAIKFYEKAFGMELLRTRDNPEYKYTIAMM 260

Query:   196 GYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQP 255
             GY  ED+  VLELTYNYGVTEY KGNAYAQ+AI TDDVYK+AE + L     GGKITR+P
Sbjct:   261 GYGPEDKFPVLELTYNYGVTEYDKGNAYAQIAIGTDDVYKTAEAIKL----FGGKITREP 316

Query:   256 GSIPGLNTKITSFVDPDGWKTVLVDNEDFLKELQ 289
             G +PG++TKIT+ +DPDGWK+V VDN DFLKEL+
Sbjct:   317 GPLPGISTKITACLDPDGWKSVFVDNIDFLKELE 350

GO:0004462 "lactoylglutathione lyase activity" evidence=IEA;ISS

GO:0005739 "mitochondrion" evidence=ISM

GO:0005975 "carbohydrate metabolic process" evidence=ISS

GO:0046872 "metal ion binding" evidence=IEA

GO:0031977 "thylakoid lumen" evidence=IDA

GO:0009570 "chloroplast stroma" evidence=IDA

GO:0009579 "thylakoid" evidence=IDA

GO:0009409 "response to cold" evidence=IEP

GO:0010319 "stromule" evidence=IDA

GO:0009507 "chloroplast" evidence=IDA

GO:0019243 "methylglyoxal catabolic process to D-lactate" evidence=RCA

UNIPROTKB|Q9KT93 gloA "Probable lactoylglutathione lyase" [Vibrio cholerae O1 biovar El Tor str. N16961 (taxid:243277)]

 Score = 411 (149.7 bits), Expect = 2.1e-38, P = 2.1e-38
 Identities = 75/124 (60%), Positives = 93/124 (75%)

Query:    23 RFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNY 82
             R LH + RVGDLD++I+FYT+  GM LLRK +  E KY+ AFLG+G E    V+ELTYN+
Sbjct:     5 RILHTMLRVGDLDKSIEFYTQVMGMSLLRKNENTEYKYTLAFLGYGDESQGAVIELTYNW 64

Query:    83 GVTSYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIF 142
             GV  Y+ G  +GH AI  +D+Y   + I+A GG VTREPGP+KGGTTHIAFVKDPDGY+ 
Sbjct:    65 GVADYEKGNAYGHIAIGVDDIYATCDTIKAAGGIVTREPGPVKGGTTHIAFVKDPDGYMI 124

Query:   143 ELIQ 146
             ELIQ
Sbjct:   125 ELIQ 128

GO:0004462 "lactoylglutathione lyase activity" evidence=ISS

GO:0006749 "glutathione metabolic process" evidence=ISS

TIGR_CMR|VC_1010 VC_1010 "lactoylglutathione lyase" [Vibrio cholerae O1 biovar El Tor (taxid:686)]

 Score = 411 (149.7 bits), Expect = 2.1e-38, P = 2.1e-38
 Identities = 75/124 (60%), Positives = 93/124 (75%)

Query:    23 RFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNY 82
             R LH + RVGDLD++I+FYT+  GM LLRK +  E KY+ AFLG+G E    V+ELTYN+
Sbjct:     5 RILHTMLRVGDLDKSIEFYTQVMGMSLLRKNENTEYKYTLAFLGYGDESQGAVIELTYNW 64

Query:    83 GVTSYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIF 142
             GV  Y+ G  +GH AI  +D+Y   + I+A GG VTREPGP+KGGTTHIAFVKDPDGY+ 
Sbjct:    65 GVADYEKGNAYGHIAIGVDDIYATCDTIKAAGGIVTREPGPVKGGTTHIAFVKDPDGYMI 124

Query:   143 ELIQ 146
             ELIQ
Sbjct:   125 ELIQ 128

GO:0004462 "lactoylglutathione lyase activity" evidence=ISS

GO:0006749 "glutathione metabolic process" evidence=ISS

UNIPROTKB|P0AC81 gloA "GloA" [Escherichia coli K-12 (taxid:83333)]

 Score = 394 (143.8 bits), Expect = 1.3e-36, P = 1.3e-36
 Identities = 73/124 (58%), Positives = 92/124 (74%)

Query:    23 RFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNY 82
             R LH + RVGDL R+I FYT+  GMKLLR  + PE KYS AF+G+GPE    V+ELTYN+
Sbjct:     2 RLLHTMLRVGDLQRSIDFYTKVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNW 61

Query:    83 GVTSYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIF 142
             GV  Y++GT +GH A++ ++  +  E IR  GGNVTRE GP+KGGTT IAFV+DPDGY  
Sbjct:    62 GVDKYELGTAYGHIALSVDNAAEACEKIRQNGGNVTREAGPVKGGTTVIAFVEDPDGYKI 121

Query:   143 ELIQ 146
             ELI+
Sbjct:   122 ELIE 125

GO:0016151 "nickel cation binding" evidence=IDA

GO:0005515 "protein binding" evidence=IPI

GO:0004462 "lactoylglutathione lyase activity" evidence=IEA;IDA

GO:0019243 "methylglyoxal catabolic process to D-lactate" evidence=IMP

TIGR_CMR|SO_2044 SO_2044 "lactoylglutathione lyase" [Shewanella oneidensis MR-1 (taxid:211586)]

 Score = 384 (140.2 bits), Expect = 1.5e-35, P = 1.5e-35
 Identities = 73/125 (58%), Positives = 90/125 (72%)

Query:    23 RFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQS-HFVVELTYN 81
             + LH + RVG+L+R+I FYT+  GMKLLR  + PE KYS AF+G+G E +   V+ELTYN
Sbjct:     3 QLLHTMIRVGNLERSIAFYTQVLGMKLLRTSENPEYKYSLAFVGYGEESTGQAVIELTYN 62

Query:    82 YGVTSYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYI 141
             +G   YD+GTGFGH AI  +D+Y   E I A GG VTR PGP+ GGTT IAFV+DPDGY 
Sbjct:    63 WGTEKYDLGTGFGHIAIGDDDIYARCEAIAAAGGKVTRAPGPVAGGTTEIAFVEDPDGYK 122

Query:   142 FELIQ 146
              E IQ
Sbjct:   123 IEFIQ 127

GO:0004462 "lactoylglutathione lyase activity" evidence=ISS

GO:0008152 "metabolic process" evidence=ISS

DICTYBASE|DDB_G0291265 gloA "glyoxylase I" [Dictyostelium discoideum (taxid:44689)]

 Score = 362 (132.5 bits), Expect = 3.2e-33, P = 3.2e-33
 Identities = 68/124 (54%), Positives = 89/124 (71%)

Query:    23 RFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNY 82
             R LH + RVG+L+++++FY +  GMKLLRK +  E KY+ AF+G+  E  + V+ELTYN+
Sbjct:     3 RILHTMLRVGNLEKSLQFYIDVLGMKLLRKSENVEYKYTLAFVGYTNEDENAVIELTYNW 62

Query:    83 GVTSYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIF 142
             GV  Y++GT FGH AI  +DVY+ VE IR  GG V RE  P+ GGTT IAFV+DPD Y  
Sbjct:    63 GVEKYELGTAFGHIAIGVDDVYETVERIRKSGGKVAREAAPVLGGTTVIAFVEDPDNYKI 122

Query:   143 ELIQ 146
             ELIQ
Sbjct:   123 ELIQ 126

GO:0046872 "metal ion binding" evidence=IEA

GO:0004462 "lactoylglutathione lyase activity" evidence=IEA;ISS

GO:0005575 "cellular_component" evidence=ND

GO:0006749 "glutathione metabolic process" evidence=ISS

GO:0016829 "lyase activity" evidence=IEA

ASPGD|ASPL0000011175 AN4174 [Emericella nidulans (taxid:162425)]

 Score = 218 (81.8 bits), Expect = 1.9e-26, Sum P(2) = 1.9e-26
 Identities = 72/242 (29%), Positives = 113/242 (46%)

Query:    70 EQSH-FVVELTYNYGVTSYDIGT--GFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKG 126
             E +H +  E   NY +T+ +     G+GH AI+ +++    + +   G    ++    +G
Sbjct:    72 ELTHNYGTENDPNYSITNGNTEPHRGYGHIAISVDNIEAACQRLEDAGYAFQKKL--TEG 129

Query:   127 GTTHIAFVKDPDGYIFELIQR-----GPTPEP----LCQVMLRVGDLGRSIKFYEKALGM 177
                HIAFVKDPDGY  E+I+R       + +P    L   MLRV D   S+K+Y++ LGM
Sbjct:   130 RMRHIAFVKDPDGYWVEIIKRRDEAMSTSTDPATYRLNHTMLRVKDAEASLKYYQEVLGM 189

Query:   178 KLLRTVDKPEYKYTLAMLGY-AEEDQTT------------VLELTYNYGVTEYTKGNAYA 224
              L+RT++  E  + L  LGY A   Q T            +LELT+NYG TE  +G  Y 
Sbjct:   190 TLVRTIENKEAAFNLYFLGYPASNPQATEGANNPVAEWEGLLELTWNYG-TEKQEGKVYH 248

Query:   225 QVAISTDD---VYKSAEVVNLVTQELGG-KITRQPGSIPGLNTKITSFVDPDGWKTVLVD 280
                        +  S + +N   +     K+  +     G    +   +DPDG+   ++ 
Sbjct:   249 NGNDEPQGFGHICVSVDDLNAACERFESLKVNWKKRLTDGRMKNVAFLLDPDGYWIEVIQ 308

Query:   281 NE 282
             NE
Sbjct:   309 NE 310

GO:0009438 "methylglyoxal metabolic process" evidence=RCA

GO:0004462 "lactoylglutathione lyase activity" evidence=IEA;RCA

GO:0005634 "nucleus" evidence=IEA

GO:0005829 "cytosol" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0006749 "glutathione metabolic process" evidence=IEA

GO:0019243 "methylglyoxal catabolic process to D-lactate" evidence=IEA

POMBASE|SPBC12C2.12c glo1 "glyoxalase I" [Schizosaccharomyces pombe (taxid:4896)]

 Score = 192 (72.6 bits), Expect = 1.3e-24, Sum P(2) = 1.3e-24
 Identities = 62/183 (33%), Positives = 87/183 (47%)

Query:    65 LGFGPEQS--HFVVELTYNYGVTS-----YDIGT-----GFGHFAIATEDVYKLVENIRA 112
             L  G E+S    ++ELTYN+G        Y  G      GFGH     +++      + +
Sbjct:    61 LNHGVERSKREGILELTYNFGTEKKEGPVYINGNTEPKRGFGHICFTVDNIESACAYLES 120

Query:   113 KGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRGPTPEPLCQV--------MLRVGDL 164
             KG +  ++     G   HIAF  DPD Y  EL+ +  T +P   +        M+RV D 
Sbjct:   121 KGVSFKKKLSD--GKMKHIAFALDPDNYWIELVSQSET-KPKANISNFRFNHTMVRVKDP 177

Query:   165 GRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEE----DQTTVLELTYNYGVTEYTKG 220
               SI FYEK LGMK++   D P  K+T   L Y  +    D+  +LELT+N+G TE   G
Sbjct:   178 EPSIAFYEK-LGMKVIDKADHPNGKFTNYFLAYPSDLPRHDREGLLELTHNWG-TEKESG 235

Query:   221 NAY 223
               Y
Sbjct:   236 PVY 238

GO:0004462 "lactoylglutathione lyase activity" evidence=IGI;IDA

GO:0005634 "nucleus" evidence=ISO;IDA

GO:0005737 "cytoplasm" evidence=ISO

GO:0005829 "cytosol" evidence=IDA

GO:0006749 "glutathione metabolic process" evidence=IDA

GO:0008270 "zinc ion binding" evidence=IDA

GO:0019243 "methylglyoxal catabolic process to D-lactate" evidence=IMP

GO:0071470 "cellular response to osmotic stress" evidence=TAS

RGD|1307010 Glod4 "glyoxalase domain containing 4" [Rattus norvegicus (taxid:10116)]

 Score = 264 (98.0 bits), Expect = 7.8e-23, P = 7.8e-23
 Identities = 83/277 (29%), Positives = 130/277 (46%)

Query:    22 RRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEE-----------KYSNAFLGFGPE 70
             RR LH V++VG+  +T+ F+ +  GM++LR  +  E            K+S   +GFGPE
Sbjct:     4 RRALHFVFKVGNRFQTVHFFRDVLGMQVLRHEEFEEGCKAACNGPYDGKWSKTMVGFGPE 63

Query:    71 QSHFVVELTYNYGVTSYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTH 130
               HFV ELTYNYG+  Y +G  F    +A+      V N R       R   PL      
Sbjct:    64 DDHFVAELTYNYGIGDYKLGNDFMGLTLASSQA---VSNAR-------RLEWPLSKVAEG 113

Query:   131 IAFVKDPDGYIFELIQRGPTP-EPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYK 189
             +   + P GY F L  R P+  +P+ +V L V DL +S+ ++   LGMK+    D+ E K
Sbjct:   114 VFETEAPGGYKFYLQDRSPSQSDPVLKVTLAVSDLQKSLNYWSNLLGMKIYEQ-DE-EKK 171

Query:   190 YTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGG 249
             +  A+LGYA+ DQ   LEL    G  +++        +    ++    +++   +Q +  
Sbjct:   172 W--ALLGYAD-DQCK-LELQGIQGAVDHSAAFGRIAFSCPQKELPDLEDLMKRESQSILT 227

Query:   250 KITR--QPGSIPGLNTKITSFVDPDGWKTVLVDNEDF 284
              +     PG       ++    DPDG +   V +E F
Sbjct:   228 PLVSLDTPGKA---TVQVVILADPDGHEICFVGDEAF 261

GO:0005739 "mitochondrion" evidence=IEA;ISO

UNIPROTKB|Q9HC38 GLOD4 "Glyoxalase domain-containing protein 4" [Homo sapiens (taxid:9606)]

 Score = 206 (77.6 bits), Expect = 1.4e-22, Sum P(2) = 1.4e-22
 Identities = 68/229 (29%), Positives = 101/229 (44%)

Query:    59 KYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIATEDVYKLVENIRAKGGNVT 118
             K+S   +GFGPE  HFV ELTYNYGV  Y +G  F    +A+      V N R       
Sbjct:    67 KWSKTMVGFGPEDDHFVAELTYNYGVGDYKLGNDFMGITLASSQA---VSNAR------- 116

Query:   119 REPGPLKGGTTHIAFVKDPDGYIFELIQRG-PTPEPLCQVMLRVGDLGRSIKFYEKALGM 177
             +   PL      +   + P GY F L  R  P  +P+ +V L V DL +S+ ++   LGM
Sbjct:   117 KLEWPLTEVAEGVFETEAPGGYKFYLQNRSLPQSDPVLKVTLAVSDLQKSLNYWCNLLGM 176

Query:   178 KLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDVYKSA 237
             K+    +K E K   A+LGYA  D    LEL    G  ++         +    ++    
Sbjct:   177 KIY---EKDEEKQR-ALLGYA--DNQCKLELQGVKGGVDHAAAFGRIAFSCPQKELPDLE 230

Query:   238 EVVNLVTQELGGKITR--QPGSIPGLNTKITSFVDPDGWKTVLVDNEDF 284
             +++    Q++   +     PG       ++    DPDG +   V +E F
Sbjct:   231 DLMKRENQKILTPLVSLDTPGKA---TVQVVILADPDGHEICFVGDEAF 276

GO:0005739 "mitochondrion" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q8W593	LGUC_ARATH	4, ., 4, ., 1, ., 5	0.7256	0.9759	0.8114	no	no
Q39366	LGUL_BRAOG	4, ., 4, ., 1, ., 5	0.8156	0.9656	0.9964	N/A	no
Q948T6	LGUL_ORYSJ	4, ., 4, ., 1, ., 5	0.8006	0.9931	0.9931	yes	no
Q09751	LGUL_SCHPO	4, ., 4, ., 1, ., 5	0.3209	0.8350	0.8046	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	4.4.1	LOW CONFIDENCE prediction!
4th Layer	4.4.1.5	0.979

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input:
	GSVIVG00010980001	SubName- Full=Chromosome chr10 scaffold_297, whole genome shotgun sequence; (292 aa)
		(Vitis vinifera)
Predicted Functional Partners:
	GSVIVG00029246001	SubName- Full=Chromosome chr13 scaffold_48, whole genome shotgun sequence; (258 aa)						•	•		0.924
	GSVIVG00038137001	SubName- Full=Chromosome chr14 scaffold_9, whole genome shotgun sequence; (483 aa)						•			0.800
	GSVIVG00027369001	SubName- Full=Chromosome chr19 scaffold_4, whole genome shotgun sequence; (458 aa)						•			0.800
	GSVIVG00023836001	SubName- Full=Chromosome chr7 scaffold_31, whole genome shotgun sequence; (316 aa)						•			0.800
	GSVIVG00016002001	SubName- Full=Chromosome chr17 scaffold_12, whole genome shotgun sequence; (703 aa)						•			0.800
	GSVIVG00009475001	SubName- Full=Chromosome undetermined scaffold_235, whole genome shotgun sequence; (770 aa)						•			0.800
	GSVIVG00006903001	SubName- Full=Chromosome chr10 scaffold_179, whole genome shotgun sequence; (407 aa)						•			0.800
	GSVIVG00000550001	SubName- Full=Chromosome chr8 scaffold_106, whole genome shotgun sequence; (476 aa)						•			0.800

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	291
PLN02300	286	PLN02300, PLN02300, lactoylglutathione lyase	0.0
TIGR00068	150	TIGR00068, glyox_I, lactoylglutathione lyase	2e-84
cd07233	121	cd07233, Glyoxalase_I, Glyoxalase I catalyzes the	7e-57
PRK10291	129	PRK10291, PRK10291, glyoxalase I; Provisional	3e-46
TIGR00068	150	TIGR00068, glyox_I, lactoylglutathione lyase	3e-44
PRK10291	129	PRK10291, PRK10291, glyoxalase I; Provisional	1e-35
cd07233	121	cd07233, Glyoxalase_I, Glyoxalase I catalyzes the	2e-35
pfam00903	120	pfam00903, Glyoxalase, Glyoxalase/Bleomycin resist	1e-27
cd08358	127	cd08358, Glo_EDI_BRP_like_21, This conserved domai	7e-27
cd06587	110	cd06587, Glo_EDI_BRP_like, This domain superfamily	6e-19
PLN03042	185	PLN03042, PLN03042, Lactoylglutathione lyase; Prov	2e-18
PLN02367	233	PLN02367, PLN02367, lactoylglutathione lyase	4e-17
cd08358	127	cd08358, Glo_EDI_BRP_like_21, This conserved domai	2e-16
pfam00903	120	pfam00903, Glyoxalase, Glyoxalase/Bleomycin resist	6e-16
PLN03042	185	PLN03042, PLN03042, Lactoylglutathione lyase; Prov	5e-15
pfam12681	109	pfam12681, Glyoxalase_2, Glyoxalase-like domain	1e-13
PLN02367	233	PLN02367, PLN02367, lactoylglutathione lyase	9e-13
COG0346	138	COG0346, GloA, Lactoylglutathione lyase and relate	2e-11
cd06587	110	cd06587, Glo_EDI_BRP_like, This domain superfamily	7e-10
cd07245	114	cd07245, Glo_EDI_BRP_like_9, This conserved domain	1e-09
cd08362	120	cd08362, BphC5-RrK37_N_like, N-terminal, non-catal	1e-08
cd08354	122	cd08354, Glo_EDI_BRP_like_13, This conserved domai	3e-08
pfam12681	109	pfam12681, Glyoxalase_2, Glyoxalase-like domain	5e-08
cd07249	128	cd07249, MMCE, Methylmalonyl-CoA epimerase (MMCE)	5e-08
TIGR03081	128	TIGR03081, metmalonyl_epim, methylmalonyl-CoA epim	1e-07
cd07255	125	cd07255, Glo_EDI_BRP_like_12, This conserved domai	2e-06
cd07247	114	cd07247, SgaA_N_like, N-terminal domain of Strepto	3e-06
cd07242	128	cd07242, Glo_EDI_BRP_like_6, This conserved domain	4e-06
COG0346	138	COG0346, GloA, Lactoylglutathione lyase and relate	8e-06
cd08348	134	cd08348, BphC2-C3-RGP6_C_like, The single-domain 2	2e-05
TIGR02295	294	TIGR02295, HpaD, 3,4-dihydroxyphenylacetate 2,3-di	2e-05
COG3324	127	COG3324, COG3324, Predicted enzyme related to lact	2e-05
cd07253	125	cd07253, Glo_EDI_BRP_like_2, This conserved domain	3e-05
cd07263	120	cd07263, Glo_EDI_BRP_like_16, This conserved domai	4e-05
cd08346	126	cd08346, PcpA_N_like, N-terminal domain of Sphingo	4e-05
pfam13669	110	pfam13669, Glyoxalase_4, Glyoxalase/Bleomycin resi	9e-05
COG3324	127	COG3324, COG3324, Predicted enzyme related to lact	2e-04
cd08343	131	cd08343, ED_TypeI_classII_C, C-terminal domain of	2e-04
cd08349	112	cd08349, BLMA_like, Bleomycin binding protein (BLM	2e-04
cd07251	120	cd07251, Glo_EDI_BRP_like_10, This conserved domai	2e-04
cd08345	113	cd08345, Fosfomycin_RP, Fosfomycin resistant prote	2e-04
cd07247	114	cd07247, SgaA_N_like, N-terminal domain of Strepto	3e-04
pfam13468	174	pfam13468, Glyoxalase_3, Glyoxalase-like domain	7e-04
cd07262	123	cd07262, Glo_EDI_BRP_like_19, This conserved domai	7e-04
cd07255	125	cd07255, Glo_EDI_BRP_like_12, This conserved domai	0.001
cd08352	125	cd08352, Glo_EDI_BRP_like_1, This conserved domain	0.001
TIGR03645	162	TIGR03645, glyox_marine, lactoylglutathione lyase	0.004

>gnl|CDD|215169 PLN02300, PLN02300, lactoylglutathione lyase

 Score =  554 bits (1430), Expect = 0.0
 Identities = 229/289 (79%), Positives = 250/289 (86%), Gaps = 4/289 (1%)

Query: 1   MAEASPAAANAELLEWPKKDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKY 60
            A AS AA   +LLEWPKKDKRR LH VYRVGDLDRTIKFYTEC GMKLLRKRD+PEEKY
Sbjct: 2   SAAASTAAEAEDLLEWPKKDKRRMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKY 61

Query: 61  SNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTRE 120
           +NAFLG+GPE S+FVVELTYNYGV  YDIGTGFGHF IA EDV K VE ++AKGG VTRE
Sbjct: 62  TNAFLGYGPEDSNFVVELTYNYGVDKYDIGTGFGHFGIAVEDVAKTVELVKAKGGKVTRE 121

Query: 121 PGPLKGGTTHIAFVKDPDGYIFELIQRGPTPEPLCQVMLRVGDLGRSIKFYEKALGMKLL 180
           PGP+KGG + IAFVKDPDGY FELIQRGPTPEPLCQVMLRVGDL RSIKFYEKA GMKLL
Sbjct: 122 PGPVKGGKSVIAFVKDPDGYKFELIQRGPTPEPLCQVMLRVGDLDRSIKFYEKAFGMKLL 181

Query: 181 RTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDVYKSAEVV 240
           R  D PEYKYT+AM+GY  ED+TTVLELTYNYGVTEYTKGNAYAQ+AI TDDVYK+AE +
Sbjct: 182 RKRDNPEYKYTIAMMGYGPEDKTTVLELTYNYGVTEYTKGNAYAQIAIGTDDVYKTAEAI 241

Query: 241 NLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNEDFLKELQ 289
            LV    GGKITR+PG +PG+NTKIT+ +DPDGWKTV VDN DFLKEL+
Sbjct: 242 KLV----GGKITREPGPLPGINTKITACLDPDGWKTVFVDNIDFLKELE 286

Length = 286

>gnl|CDD|232807 TIGR00068, glyox_I, lactoylglutathione lyase

 Score =  249 bits (637), Expect = 2e-84
 Identities = 91/149 (61%), Positives = 109/149 (73%)

Query: 8   AANAELLEWPKKDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGF 67
           A + +L+  PK  KRR LH + RVGDLD+++ FYTE  GMKLLRKRD PE K+S AFLG+
Sbjct: 2   AESGDLVADPKTKKRRLLHTMLRVGDLDKSLDFYTEVLGMKLLRKRDFPEMKFSLAFLGY 61

Query: 68  GPEQSHFVVELTYNYGVTSYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGG 127
           G E S  V+ELT+N+G   YD+G GFGH AI  +DVYK  E +RA GGNV REPGP+KGG
Sbjct: 62  GDETSAAVIELTHNWGTEKYDLGNGFGHIAIGVDDVYKACERVRALGGNVVREPGPVKGG 121

Query: 128 TTHIAFVKDPDGYIFELIQRGPTPEPLCQ 156
           TT IAFV+DPDGY  ELIQR  T + L  
Sbjct: 122 TTVIAFVEDPDGYKIELIQRKSTKDGLGN 150

Lactoylglutathione lyase is also known as aldoketomutase and glyoxalase I. Glyoxylase I is a homodimer in many species. In some eukaryotes, including yeasts and plants, the orthologous protein carries a tandem duplication, is twice as long, and hits This model twice [Central intermediary metabolism, Amino sugars, Energy metabolism, Other]. Length = 150

>gnl|CDD|176659 cd07233, Glyoxalase_I, Glyoxalase I catalyzes the isomerization of the hemithioacetal, formed by a 2-oxoaldehyde and glutathione, to S-D-lactoylglutathione

 Score =  178 bits (454), Expect = 7e-57
 Identities = 64/123 (52%), Positives = 81/123 (65%), Gaps = 3/123 (2%)

Query: 24  FLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYG 83
           FLH + RV DL++++ FYT+  GMKLLR++D PE K++  FLG+  E S  V+ELTYN+G
Sbjct: 1   FLHTMLRVKDLEKSLDFYTDVLGMKLLRRKDFPEGKFTLVFLGYPDEDSEGVLELTYNWG 60

Query: 84  VT-SYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIF 142
               YD G GFGH A A +DVY   E +   G  VT+ PG   GG   IAF+KDPDGY  
Sbjct: 61  TEEPYDNGNGFGHLAFAVDDVYAACERLEEMGVEVTKPPGD--GGMKGIAFIKDPDGYWI 118

Query: 143 ELI 145
           ELI
Sbjct: 119 ELI 121

Glyoxalase I (also known as lactoylglutathione lyase; EC 4.4.1.5) is part of the glyoxalase system, a two-step system for detoxifying methylglyoxal, a side product of glycolysis. This system is responsible for the conversion of reactive, acyclic alpha-oxoaldehydes into the corresponding alpha-hydroxyacids and involves 2 enzymes, glyoxalase I and II. Glyoxalase I catalyses an intramolecular redox reaction of the hemithioacetal (formed from methylglyoxal and glutathione) to form the thioester, S-D-lactoylglutathione. This reaction involves the transfer of two hydrogen atoms from C1 to C2 of the methylglyoxal, and proceeds via an ene-diol intermediate. Glyoxalase I has a requirement for bound metal ions for catalysis. Eukaryotic glyoxalase I prefers the divalent cation zinc as cofactor, whereas Escherichia coil and other prokaryotic glyoxalase I uses nickel. However, eukaryotic Trypanosomatid parasites also use nickel as a cofactor, which could possibly be explained by acquiring their GLOI gene by horizontal gene transfer. Human glyoxalase I is a two-domain enzyme and it has the structure of a domain-swapped dimer with two active sites located at the dimer interface. In yeast, in various plants, insects and Plasmodia, glyoxalase I is four-domain, possibly the result of a further gene duplication and an additional gene fusing event. Length = 121

>gnl|CDD|182358 PRK10291, PRK10291, glyoxalase I; Provisional

 Score =  151 bits (383), Expect = 3e-46
 Identities = 70/117 (59%), Positives = 87/117 (74%)

Query: 30  RVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDI 89
           RVGDL R+I FYT   GMKLLR  + PE KYS AF+G+GPE    V+ELTYN+GV  Y++
Sbjct: 3   RVGDLQRSIDFYTNVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNWGVDKYEL 62

Query: 90  GTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQ 146
           GT +GH A++ ++  +  E IR  GGNVTRE GP+KGGTT IAFV+DPDGY  ELI+
Sbjct: 63  GTAYGHIALSVDNAAEACEKIRQNGGNVTREAGPVKGGTTVIAFVEDPDGYKIELIE 119

Length = 129

>gnl|CDD|232807 TIGR00068, glyox_I, lactoylglutathione lyase

 Score =  147 bits (372), Expect = 3e-44
 Identities = 61/130 (46%), Positives = 81/130 (62%), Gaps = 4/130 (3%)

Query: 154 LCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYG 213
           L   MLRVGDL +S+ FY + LGMKLLR  D PE K++LA LGY +E    V+ELT+N+G
Sbjct: 18  LLHTMLRVGDLDKSLDFYTEVLGMKLLRKRDFPEMKFSLAFLGYGDETSAAVIELTHNWG 77

Query: 214 VTEYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDG 273
             +Y  GN +  +AI  DDVYK+ E V    + LGG + R+PG + G  T I    DPDG
Sbjct: 78  TEKYDLGNGFGHIAIGVDDVYKACERV----RALGGNVVREPGPVKGGTTVIAFVEDPDG 133

Query: 274 WKTVLVDNED 283
           +K  L+  + 
Sbjct: 134 YKIELIQRKS 143

Lactoylglutathione lyase is also known as aldoketomutase and glyoxalase I. Glyoxylase I is a homodimer in many species. In some eukaryotes, including yeasts and plants, the orthologous protein carries a tandem duplication, is twice as long, and hits This model twice [Central intermediary metabolism, Amino sugars, Energy metabolism, Other]. Length = 150

>gnl|CDD|182358 PRK10291, PRK10291, glyoxalase I; Provisional

 Score =  124 bits (312), Expect = 1e-35
 Identities = 61/126 (48%), Positives = 83/126 (65%), Gaps = 4/126 (3%)

Query: 158 MLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEY 217
           MLRVGDL RSI FY   LGMKLLRT + PEYKY+LA +GY  E +  V+ELTYN+GV +Y
Sbjct: 1   MLRVGDLQRSIDFYTNVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNWGVDKY 60

Query: 218 TKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTV 277
             G AY  +A+S D+  ++ E +    ++ GG +TR+ G + G  T I    DPDG+K  
Sbjct: 61  ELGTAYGHIALSVDNAAEACEKI----RQNGGNVTREAGPVKGGTTVIAFVEDPDGYKIE 116

Query: 278 LVDNED 283
           L++ +D
Sbjct: 117 LIEEKD 122

Length = 129

>gnl|CDD|176659 cd07233, Glyoxalase_I, Glyoxalase I catalyzes the isomerization of the hemithioacetal, formed by a 2-oxoaldehyde and glutathione, to S-D-lactoylglutathione

 Score =  123 bits (310), Expect = 2e-35
 Identities = 56/120 (46%), Positives = 73/120 (60%), Gaps = 9/120 (7%)

Query: 156 QVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVT 215
             MLRV DL +S+ FY   LGMKLLR  D PE K+TL  LGY +ED   VLELTYN+G  
Sbjct: 3   HTMLRVKDLEKSLDFYTDVLGMKLLRRKDFPEGKFTLVFLGYPDEDSEGVLELTYNWGTE 62

Query: 216 E-YTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFV-DPDG 273
           E Y  GN +  +A + DDVY + E +    +E+G ++T+ PG       K  +F+ DPDG
Sbjct: 63  EPYDNGNGFGHLAFAVDDVYAACERL----EEMGVEVTKPPGD---GGMKGIAFIKDPDG 115

Glyoxalase I (also known as lactoylglutathione lyase; EC 4.4.1.5) is part of the glyoxalase system, a two-step system for detoxifying methylglyoxal, a side product of glycolysis. This system is responsible for the conversion of reactive, acyclic alpha-oxoaldehydes into the corresponding alpha-hydroxyacids and involves 2 enzymes, glyoxalase I and II. Glyoxalase I catalyses an intramolecular redox reaction of the hemithioacetal (formed from methylglyoxal and glutathione) to form the thioester, S-D-lactoylglutathione. This reaction involves the transfer of two hydrogen atoms from C1 to C2 of the methylglyoxal, and proceeds via an ene-diol intermediate. Glyoxalase I has a requirement for bound metal ions for catalysis. Eukaryotic glyoxalase I prefers the divalent cation zinc as cofactor, whereas Escherichia coil and other prokaryotic glyoxalase I uses nickel. However, eukaryotic Trypanosomatid parasites also use nickel as a cofactor, which could possibly be explained by acquiring their GLOI gene by horizontal gene transfer. Human glyoxalase I is a two-domain enzyme and it has the structure of a domain-swapped dimer with two active sites located at the dimer interface. In yeast, in various plants, insects and Plasmodia, glyoxalase I is four-domain, possibly the result of a further gene duplication and an additional gene fusing event. Length = 121

>gnl|CDD|216182 pfam00903, Glyoxalase, Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily

 Score =  103 bits (258), Expect = 1e-27
 Identities = 38/125 (30%), Positives = 57/125 (45%), Gaps = 8/125 (6%)

Query: 23  RFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNY 82
           R  H   RVGDL++++ FYT+  G KL+ + D  E    +AF          V+EL  N 
Sbjct: 1   RIDHVALRVGDLEKSLDFYTDVLGFKLVEEVDDGEGPLRSAFF----TAGGRVLELLLNE 56

Query: 83  GVTSYDIGT---GFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDG 139
                  G         A + +DV    + ++A G  + REPG    G    ++ +DPDG
Sbjct: 57  TPPPAAAGFGGHHIAFIAFSVDDVDAAYDRLKAAGVEIVREPGRHGWGGR-YSYFRDPDG 115

Query: 140 YIFEL 144
            + EL
Sbjct: 116 NLIEL 120

Length = 120

>gnl|CDD|176706 cd08358, Glo_EDI_BRP_like_21, This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

 Score =  101 bits (253), Expect = 7e-27
 Identities = 52/137 (37%), Positives = 70/137 (51%), Gaps = 21/137 (15%)

Query: 22  RRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPE-----------EKYSNAFLGFGPE 70
           RR LH V++VG+ ++TIKFY E  GMK+LR  +  E            K+S   +G+GPE
Sbjct: 1   RRALHFVFKVGNRNKTIKFYREVLGMKVLRHEEFEEGCKAACNGPYDGKWSKTMIGYGPE 60

Query: 71  QSHFVVELTYNYGVTSYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTH 130
             HFVVELTYNYG+  Y++G  F    I ++          AK  N      P+      
Sbjct: 61  DDHFVVELTYNYGIGDYELGNDFLGITIHSKQAVS-----NAKKHNW-----PVTEVEDG 110

Query: 131 IAFVKDPDGYIFELIQR 147
           +  VK P GY F LI +
Sbjct: 111 VYEVKAPGGYKFYLIDK 127

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. Length = 127

>gnl|CDD|211348 cd06587, Glo_EDI_BRP_like, This domain superfamily is found in a variety of structurally related metalloproteins, including the type I extradiol dioxygenases, glyoxalase I and a group of antibiotic resistance proteins

 Score = 79.8 bits (197), Expect = 6e-19
 Identities = 34/119 (28%), Positives = 51/119 (42%), Gaps = 9/119 (7%)

Query: 26  HAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVT 85
           H    V DL+  + FY +  G ++L +     E    AFL  G       +EL +     
Sbjct: 1   HVGLTVPDLEAAVAFYEDVLGFEVLERDGGGAE---FAFLRLG----GTRLEL-FEGDEP 52

Query: 86  SYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFEL 144
           +   G G  H A   +DV   VE ++A G  +   P     G   +A+ +DPDG + EL
Sbjct: 53  APPSGGGGVHLAFEVDDVDAAVERLKAAGVEILGGPREEPWGGR-VAYFRDPDGNLIEL 110

This domain superfamily is found in a variety of structurally related metalloproteins, including the type I extradiol dioxygenases, glyoxalase I and a group of antibiotic resistance proteins. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). Type I extradiol dioxygenases catalyze the incorporation of both atoms of molecular oxygen into aromatic substrates, which results in the cleavage of aromatic rings. They are key enzymes in the degradation of aromatic compounds. Type I extradiol dioxygenases include class I and class II enzymes. Class I and II enzymes show sequence similarity; the two-domain class II enzymes evolved from a class I enzyme through gene duplication. Glyoxylase I catalyzes the glutathione-dependent inactivation of toxic methylglyoxal, requiring zinc or nickel ions for activity. The antibiotic resistance proteins in this family use a variety of mechanisms to block the function of antibiotics. Bleomycin resistance protein (BLMA) sequesters bleomycin's activity by directly binding to it. Whereas, three types of fosfomycin resistance proteins employ different mechanisms to render fosfomycin inactive by modifying the fosfomycin molecule. Although the proteins in this superfamily are functionally distinct, their structures are similar. The difference among the three dimensional structures of the three types of proteins in this superfamily is interesting from an evolutionary perspective. Both glyoxalase I and BLMA show domain swapping between subunits. However, there is no domain swapping for type 1 extradiol dioxygenases. Length = 110

>gnl|CDD|215548 PLN03042, PLN03042, Lactoylglutathione lyase; Provisional

 Score = 80.2 bits (198), Expect = 2e-18
 Identities = 59/176 (33%), Positives = 86/176 (48%), Gaps = 35/176 (19%)

Query: 1   MAEASP--AAANAELLEWPKKDKRRFL--HAVYRVGDLDRTIKFYTECFGMKLLRKRDVP 56
           MA AS   AA N  L   P +  + ++    ++R+ D   ++ FY+   GM LL++ D P
Sbjct: 1   MASASKESAANNPGLCGNPDEATKGYIMQQTMFRIKDPKASLDFYSRVLGMSLLKRLDFP 60

Query: 57  EEKYSNAFLGF---------GPEQSHFV------VELTYNYGVTS------YDIG----T 91
           E K+S  FLG+          PE++ +       +ELT+N+G  S      Y  G     
Sbjct: 61  EMKFSLYFLGYEDSETAPTDPPERTVWTFGRKATIELTHNWGTESDPEFKGYHNGNSDPR 120

Query: 92  GFGHFAIATEDVYKLVENIRAKGGNVTREP--GPLKGGTTHIAFVKDPDGYIFELI 145
           GFGH  I  +DVYK  E     G    ++P  G +KG    +AF+KDPDGY  E+ 
Sbjct: 121 GFGHIGITVDDVYKACERFEKLGVEFVKKPDDGKMKG----LAFIKDPDGYWIEIF 172

Length = 185

>gnl|CDD|177995 PLN02367, PLN02367, lactoylglutathione lyase

 Score = 78.1 bits (192), Expect = 4e-17
 Identities = 54/153 (35%), Positives = 73/153 (47%), Gaps = 34/153 (22%)

Query: 28  VYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQS--------------- 72
           +YR+ D   ++ FY+   GM LL++ D PE K+S  F+G+    S               
Sbjct: 80  MYRIKDPKASLDFYSRVLGMSLLKRLDFPEMKFSLYFMGYEDTASAPTDPTERTVWTFGQ 139

Query: 73  HFVVELTYNYGVTS------YDIGT----GFGHFAIATEDVYKLVENIRAKGGNVTREP- 121
              +ELT+N+G  S      Y  G     GFGH  I  +DVYK  E     G    ++P 
Sbjct: 140 KATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFEELGVEFVKKPN 199

Query: 122 -GPLKGGTTHIAFVKDPDGY---IFELIQRGPT 150
            G +KG    IAF+KDPDGY   IF+L   G T
Sbjct: 200 DGKMKG----IAFIKDPDGYWIEIFDLKTIGTT 228

Length = 233

>gnl|CDD|176706 cd08358, Glo_EDI_BRP_like_21, This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

 Score = 73.9 bits (182), Expect = 2e-16
 Identities = 41/134 (30%), Positives = 64/134 (47%), Gaps = 27/134 (20%)

Query: 159 LRVGDLGRSIKFYEKALGMKLLR----------TVDKP-EYKYTLAMLGYAEEDQTTVLE 207
            +VG+  ++IKFY + LGMK+LR            + P + K++  M+GY  ED   V+E
Sbjct: 8   FKVGNRNKTIKFYREVLGMKVLRHEEFEEGCKAACNGPYDGKWSKTMIGYGPEDDHFVVE 67

Query: 208 LTYNYGVTEYTKGNAYAQVAISTDDVYKSAEVVN-LVTQELGGKITRQPGSIPGLNTKIT 266
           LTYNYG+ +Y  GN +  + I +     +A+  N  VT+   G    +            
Sbjct: 68  LTYNYGIGDYELGNDFLGITIHSKQAVSNAKKHNWPVTEVEDGVYEVK------------ 115

Query: 267 SFVDPDGWKTVLVD 280
               P G+K  L+D
Sbjct: 116 ---APGGYKFYLID 126

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. Length = 127

>gnl|CDD|216182 pfam00903, Glyoxalase, Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily

 Score = 72.1 bits (177), Expect = 6e-16
 Identities = 40/123 (32%), Positives = 53/123 (43%), Gaps = 12/123 (9%)

Query: 156 QVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVT 215
            V LRVGDL +S+ FY   LG KL+  VD  E     A           VLEL  N    
Sbjct: 4   HVALRVGDLEKSLDFYTDVLGFKLVEEVDDGEGPLRSAFF----TAGGRVLELLLNETPP 59

Query: 216 EY---TKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPD 272
                  G+  A +A S DDV  + + +    +  G +I R+PG       + + F DPD
Sbjct: 60  PAAAGFGGHHIAFIAFSVDDVDAAYDRL----KAAGVEIVREPGRHGW-GGRYSYFRDPD 114

Query: 273 GWK 275
           G  
Sbjct: 115 GNL 117

Length = 120

>gnl|CDD|215548 PLN03042, PLN03042, Lactoylglutathione lyase; Provisional

 Score = 71.4 bits (175), Expect = 5e-15
 Identities = 51/150 (34%), Positives = 75/150 (50%), Gaps = 43/150 (28%)

Query: 156 QVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTV---------- 205
           Q M R+ D   S+ FY + LGM LL+ +D PE K++L  LGY  ED  T           
Sbjct: 30  QTMFRIKDPKASLDFYSRVLGMSLLKRLDFPEMKFSLYFLGY--EDSETAPTDPPERTVW 87

Query: 206 -------LELTYNYGVTE-------YTKGNA----YAQVAISTDDVYKSAEVVNLVTQEL 247
                  +ELT+N+G TE       Y  GN+    +  + I+ DDVYK+ E      ++L
Sbjct: 88  TFGRKATIELTHNWG-TESDPEFKGYHNGNSDPRGFGHIGITVDDVYKACERF----EKL 142

Query: 248 GGKITRQP--GSIPGLNTKITSFV-DPDGW 274
           G +  ++P  G + GL     +F+ DPDG+
Sbjct: 143 GVEFVKKPDDGKMKGL-----AFIKDPDGY 167

Length = 185

>gnl|CDD|221708 pfam12681, Glyoxalase_2, Glyoxalase-like domain

 Score = 65.5 bits (160), Expect = 1e-13
 Identities = 30/116 (25%), Positives = 47/116 (40%), Gaps = 8/116 (6%)

Query: 30  RVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDI 89
            V DL+    FY E  G ++    +  + +Y+   LG       F+  +           
Sbjct: 2   PVSDLEAARAFYEELLGFEV----EEEDGEYAEFRLGLVLALGGFIELIGLP---EPDAP 54

Query: 90  GTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELI 145
           G G  H     +D+  LV  ++A GG +   P     G     +V+DPDG + ELI
Sbjct: 55  GGGGVHLYFEVDDLDALVARLKAAGGTILEPPEDTPWG-GREFYVRDPDGNLIELI 109

This domain is related to the Glyoxalase domain pfam00903. Length = 109

>gnl|CDD|177995 PLN02367, PLN02367, lactoylglutathione lyase

 Score = 66.2 bits (161), Expect = 9e-13
 Identities = 48/148 (32%), Positives = 74/148 (50%), Gaps = 39/148 (26%)

Query: 156 QVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEE--------------- 200
           Q M R+ D   S+ FY + LGM LL+ +D PE K++L  +GY +                
Sbjct: 78  QTMYRIKDPKASLDFYSRVLGMSLLKRLDFPEMKFSLYFMGYEDTASAPTDPTERTVWTF 137

Query: 201 DQTTVLELTYNYGVTE-------YTKGNA----YAQVAISTDDVYKSAEVVNLVTQELGG 249
            Q   +ELT+N+G TE       Y  GN+    +  + I+ DDVYK+ E      +ELG 
Sbjct: 138 GQKATIELTHNWG-TESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERF----EELGV 192

Query: 250 KITRQP--GSIPGLNTKITSFV-DPDGW 274
           +  ++P  G + G+     +F+ DPDG+
Sbjct: 193 EFVKKPNDGKMKGI-----AFIKDPDGY 215

Length = 233

>gnl|CDD|223423 COG0346, GloA, Lactoylglutathione lyase and related lyases [Amino acid transport and metabolism]

 Score = 60.2 bits (145), Expect = 2e-11
 Identities = 27/141 (19%), Positives = 43/141 (30%), Gaps = 19/141 (13%)

Query: 22  RRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFG-----------PE 70
               H    V DL+ +I FYT+  G++L++      +      L F              
Sbjct: 1   MGIHHVTLAVPDLEASIDFYTDVLGLRLVKDTVNEADDGGGYHLLFLDGDGGPGELLAFF 60

Query: 71  QSHFVVELTYNYGV-TSYDIGT-GFGHFAIATED---VYKLVENIRAKGGNVTREPGPLK 125
                    +   V      G  G GH A   +D       +  +   G  +        
Sbjct: 61  GFEGRAGTGFVGDVALGVPGGDLGLGHLAFEVDDEAFGDAALAFLDPDGVRIELGEPGRG 120

Query: 126 GGTTHIAFVKDPDGYIFELIQ 146
           G      + +DPDG + EL  
Sbjct: 121 G---VHVYFRDPDGILIELAT 138

Length = 138

>gnl|CDD|211348 cd06587, Glo_EDI_BRP_like, This domain superfamily is found in a variety of structurally related metalloproteins, including the type I extradiol dioxygenases, glyoxalase I and a group of antibiotic resistance proteins

 Score = 55.1 bits (133), Expect = 7e-10
 Identities = 32/118 (27%), Positives = 42/118 (35%), Gaps = 13/118 (11%)

Query: 156 QVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVT 215
            V L V DL  ++ FYE  LG ++L            A L        T LEL +     
Sbjct: 1   HVGLTVPDLEAAVAFYEDVLGFEVLERDGGGAE---FAFLRLGG----TRLEL-FEGDEP 52

Query: 216 EYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDG 273
               G     +A   DDV  + E +    +  G +I   P   P        F DPDG
Sbjct: 53  APPSGGGGVHLAFEVDDVDAAVERL----KAAGVEILGGPREEPWGGRVAY-FRDPDG 105

This domain superfamily is found in a variety of structurally related metalloproteins, including the type I extradiol dioxygenases, glyoxalase I and a group of antibiotic resistance proteins. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). Type I extradiol dioxygenases catalyze the incorporation of both atoms of molecular oxygen into aromatic substrates, which results in the cleavage of aromatic rings. They are key enzymes in the degradation of aromatic compounds. Type I extradiol dioxygenases include class I and class II enzymes. Class I and II enzymes show sequence similarity; the two-domain class II enzymes evolved from a class I enzyme through gene duplication. Glyoxylase I catalyzes the glutathione-dependent inactivation of toxic methylglyoxal, requiring zinc or nickel ions for activity. The antibiotic resistance proteins in this family use a variety of mechanisms to block the function of antibiotics. Bleomycin resistance protein (BLMA) sequesters bleomycin's activity by directly binding to it. Whereas, three types of fosfomycin resistance proteins employ different mechanisms to render fosfomycin inactive by modifying the fosfomycin molecule. Although the proteins in this superfamily are functionally distinct, their structures are similar. The difference among the three dimensional structures of the three types of proteins in this superfamily is interesting from an evolutionary perspective. Both glyoxalase I and BLMA show domain swapping between subunits. However, there is no domain swapping for type 1 extradiol dioxygenases. Length = 110

>gnl|CDD|176669 cd07245, Glo_EDI_BRP_like_9, This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

 Score = 54.9 bits (133), Expect = 1e-09
 Identities = 31/116 (26%), Positives = 46/116 (39%), Gaps = 9/116 (7%)

Query: 30  RVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQS-HFVVELTYNYGVTSYD 88
           RV DL+ +  FYT+  G   L +   P   +  A+L  G     H + E   +      +
Sbjct: 7   RVPDLEASRAFYTDVLG---LEEGPRPPFLFPGAWLYAGDGPQLHLIEEDPPD---ALPE 60

Query: 89  IGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFEL 144
                 H A   +D+      ++A G   T    P   G   + FV+DPDG   EL
Sbjct: 61  GPGRDDHIAFRVDDLDAFRARLKAAGVPYTESDVPG-DGVRQL-FVRDPDGNRIEL 114

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases. Length = 114

>gnl|CDD|176710 cd08362, BphC5-RrK37_N_like, N-terminal, non-catalytic, domain of BphC5 (2,3-dihydroxybiphenyl 1,2-dioxygenase) from Rhodococcus rhodochrous K37, and similar proteins

 Score = 52.0 bits (125), Expect = 1e-08
 Identities = 33/123 (26%), Positives = 44/123 (35%), Gaps = 16/123 (13%)

Query: 26  HAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVT 85
                V DL     FY E +G+       V  E     +L       H ++ L       
Sbjct: 6   GVGLGVPDLAAAAAFYREVWGL------SVVAEDDGIVYLR-ATGSEHHILRLR-----R 53

Query: 86  SYDIGTGFGHFAIAT-EDVYKLVENIRAKGGNVTREPGPLK--GGTTHIAFVKDPDGYIF 142
           S         F++A+  DV  L   + A+GG V  EPG     GG     F  DPDG + 
Sbjct: 54  SDRNRLDVVSFSVASRADVDALARQVAARGGTVLSEPGATDDPGGGYGFRFF-DPDGRLI 112

Query: 143 ELI 145
           E  
Sbjct: 113 EFS 115

2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC) catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). The enzyme contains a N-terminal and a C-terminal domain of similar structure fold, resulting from an ancient gene duplication. BphC belongs to the type I extradiol dioxygenase family, which requires a metal in the active site for its catalytic activity. Polychlorinated biphenyl degrading bacteria demonstrate multiplicity of BphCs. Bacterium Rhodococcus rhodochrous K37 has eight genes encoding BphC enzymes. This family includes the N-terminal domain of BphC5-RrK37. The crystal structure of the protein from Novosphingobium aromaticivorans has a Mn(II)in the active site, although most proteins of type I extradiol dioxygenases are activated by Fe(II). Length = 120

>gnl|CDD|176702 cd08354, Glo_EDI_BRP_like_13, This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

 Score = 50.8 bits (122), Expect = 3e-08
 Identities = 36/131 (27%), Positives = 55/131 (41%), Gaps = 27/131 (20%)

Query: 27  AVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTS 86
           A+Y V DL+    FY +  G++L+ K D        AF   G       + L ++ G TS
Sbjct: 5   ALY-VDDLEAAEAFYEDVLGLELMLKED-----RRLAFFWVGGRG----MLLLFDPGATS 54

Query: 87  YDIGTGFGH---------FAIATEDVYKLVENIRAKGGNV---TREPGPLKGGTTHIAFV 134
              G    H         FAI  E++ +   ++ AKG  +    + P     G   + F 
Sbjct: 55  TPGGEIPPHGGSGPGHFAFAIPAEELAEWEAHLEAKGVAIESEVQWP----RGGRSLYF- 109

Query: 135 KDPDGYIFELI 145
           +DPDG + EL 
Sbjct: 110 RDPDGNLLELA 120

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. Length = 122

>gnl|CDD|221708 pfam12681, Glyoxalase_2, Glyoxalase-like domain

 Score = 49.7 bits (119), Expect = 5e-08
 Identities = 26/115 (22%), Positives = 40/115 (34%), Gaps = 12/115 (10%)

Query: 159 LRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYT 218
           L V DL  +  FYE+ LG      V++ + +Y    LG        +  +          
Sbjct: 1   LPVSDLEAARAFYEELLGF----EVEEEDGEYAEFRLGLVLALGGFIELIGLP---EPDA 53

Query: 219 KGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDG 273
            G     +    DD+     +V  + +  GG I   P   P    +     DPDG
Sbjct: 54  PGGGGVHLYFEVDDL---DALVARL-KAAGGTILEPPEDTPW-GGREFYVRDPDG 103

This domain is related to the Glyoxalase domain pfam00903. Length = 109

>gnl|CDD|211350 cd07249, MMCE, Methylmalonyl-CoA epimerase (MMCE)

 Score = 50.2 bits (121), Expect = 5e-08
 Identities = 34/135 (25%), Positives = 53/135 (39%), Gaps = 23/135 (17%)

Query: 26  HAVYRVGDLDRTIKFYTECFGMKLL-RKRDVPEEKYSNAFLGFGP----------EQSHF 74
           H    V DL+  +KFY +  G+    R+    E+    AFLG G           + S  
Sbjct: 3   HIGIAVPDLEAALKFYRDVLGVGPWEREEVPSEQGVRLAFLGLGNVQIELIEPLDDDSPI 62

Query: 75  VVELTYNYGVTSYDIGTGFGHFAIATEDVYKLVENIRAKGGNVT-REPGPLKGGTTHIAF 133
              L           G G  H A   +D+   +  ++A+G  +    P    GG   +AF
Sbjct: 63  AKFLEKR--------GEGLHHIAFEVDDIDAALARLKAQGVRLLQEGPRIGAGG-KRVAF 113

Query: 134 V--KDPDGYIFELIQ 146
           +  KD  G + EL++
Sbjct: 114 LHPKDTGGVLIELVE 128

MMCE, also called methylmalonyl-CoA racemase (EC 5.1.99.1) interconverts (2R)-methylmalonyl-CoA and (2S)-methylmalonyl-CoA. MMCE has been found in bacteria, archaea, and in animals. In eukaryotes, MMCE is an essential enzyme in a pathway that converts propionyl-CoA to succinyl-CoA, and is important in the breakdown of odd-chain length fatty acids, branched-chain amino acids, and other metabolites. In bacteria, MMCE participates in the reverse pathway for propionate fermentation, glyoxylate regeneration, and the biosynthesis of polyketide antibiotics. MMCE is closely related to glyoxalase I and type I extradiol dioxygenases. Length = 128

>gnl|CDD|213772 TIGR03081, metmalonyl_epim, methylmalonyl-CoA epimerase

 Score = 49.2 bits (118), Expect = 1e-07
 Identities = 31/128 (24%), Positives = 54/128 (42%), Gaps = 4/128 (3%)

Query: 23  RFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNY 82
           R  H    V DL+   KFY +  G ++    ++PE+     F+  G  +   +  L  + 
Sbjct: 1   RIDHVGIAVPDLEEAAKFYEDVLGAQVSEIEELPEQGVKVVFIALGNTKVELLEPLGEDS 60

Query: 83  GVTSY--DIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFV--KDPD 138
            +  +    G G  H AI  +D+   +E ++ KG  +  E   +      +AF+  K   
Sbjct: 61  PIAKFLEKNGGGIHHIAIEVDDIEAALETLKEKGVRLIDEEPRIGAHGKPVAFLHPKSTG 120

Query: 139 GYIFELIQ 146
           G + EL Q
Sbjct: 121 GVLIELEQ 128

Members of this protein family are the enzyme methylmalonyl-CoA epimerase (EC 5.1.99.1), also called methylmalonyl-CoA racemase. This enzyme converts (2R)-methylmalonyl-CoA to (2S)-methylmalonyl-CoA, which is then a substrate for methylmalonyl-CoA mutase (TIGR00642). It is known in bacteria, archaea, and as a mitochondrial protein in animals. It is closely related to lactoylglutathione lyase (TIGR00068), which is also called glyoxylase I, and is also a homodimer. Length = 128

>gnl|CDD|211352 cd07255, Glo_EDI_BRP_like_12, This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

 Score = 45.6 bits (109), Expect = 2e-06
 Identities = 36/125 (28%), Positives = 55/125 (44%), Gaps = 23/125 (18%)

Query: 23  RFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNY 82
           R      RV DL+R++ FY +  G+++L + D      S A LG G ++   V+E   + 
Sbjct: 2   RIGAVTLRVADLERSLAFYQDVLGLEVLERTD------STAVLGTGGKRPLLVLEEDPDA 55

Query: 83  GVTSYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTR----EPGPLKGGTTHI---AF-V 134
                   TG  HFAI       L+ + RA      R       PL+G + H+   A  +
Sbjct: 56  PPAPPG-TTGLYHFAI-------LLPS-RADLARALRRLIELGIPLEGASDHLVSEALYL 106

Query: 135 KDPDG 139
            DP+G
Sbjct: 107 SDPEG 111

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. Length = 125

>gnl|CDD|176671 cd07247, SgaA_N_like, N-terminal domain of Streptomyces griseus SgaA (suppression of growth disturbance caused by A-factor at a high concentration under high osmolality during early growth phase), and similar domains

 Score = 44.9 bits (107), Expect = 3e-06
 Identities = 27/121 (22%), Positives = 36/121 (29%), Gaps = 19/121 (15%)

Query: 31  VGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNY-----GVT 85
             D +R   FY   FG             Y  A    G      +++          G  
Sbjct: 8   TTDPERAKAFYGAVFGWTF-EDMGDGGGDY--AVFSTGGGAVGGLMKAPEPAAGSPPGWL 64

Query: 86  SYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELI 145
            Y           A +DV      + A GG V   P  +  G    A   DP+G +F L 
Sbjct: 65  VY----------FAVDDVDAAAARVEAAGGKVLVPPTDI-PGVGRFAVFADPEGAVFGLW 113

Query: 146 Q 146
           Q
Sbjct: 114 Q 114

SgaA suppresses the growth disturbances caused by high osmolarity and a high concentration of A-factor, a microbial hormone, during the early growth phase in Streptomyces griseus. A-factor (2-isocapryloyl-3R-hydroxymethyl-gamma-butyrolactone) controls morphological differentiation and secondary metabolism in Streptomyces griseus. It is a chemical signaling molecule that at a very low concentration acts as a switch for yellow pigment production, aerial mycelium formation, streptomycin production, and streptomycin resistance. The structure and amino acid sequence of SgaA are closely related to a group of antibiotics resistance proteins, including bleomycin resistance protein, mitomycin resistance protein, and fosfomycin resistance proteins. SgaA might also function as a streptomycin resistance protein. Length = 114

>gnl|CDD|176666 cd07242, Glo_EDI_BRP_like_6, This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

 Score = 45.0 bits (107), Expect = 4e-06
 Identities = 29/126 (23%), Positives = 47/126 (37%), Gaps = 9/126 (7%)

Query: 26  HAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVT 85
           H    V DL+R+  FY    G+    +    E+  S      G   ++ V++        
Sbjct: 4   HVELTVRDLERSRAFYDWLLGLLGFEEVKEWEDGRSWRAGDGG---TYLVLQQADGESAG 60

Query: 86  SYDI-GTGFGHFAI---ATEDVYKLVENIRAKGGNVTREPG--PLKGGTTHIAFVKDPDG 139
            +D    G  H A    + E V +L   +  +G  +   P      G   +  F +DPDG
Sbjct: 61  RHDRRNPGLHHLAFRAPSREAVDELYARLAKRGAEILYAPREPYAGGPGYYALFFEDPDG 120

Query: 140 YIFELI 145
              EL+
Sbjct: 121 IRLELV 126

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping. Length = 128

>gnl|CDD|223423 COG0346, GloA, Lactoylglutathione lyase and related lyases [Amino acid transport and metabolism]

 Score = 44.4 bits (104), Expect = 8e-06
 Identities = 26/131 (19%), Positives = 39/131 (29%), Gaps = 17/131 (12%)

Query: 156 QVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNY--- 212
            V L V DL  SI FY   LG++L++             L + + D      L +     
Sbjct: 5   HVTLAVPDLEASIDFYTDVLGLRLVKDTVNEADDGGGYHLLFLDGDGGPGELLAFFGFEG 64

Query: 213 ----------GVTEYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLN 262
                      +           +A   DD       +  +  + G +I        G  
Sbjct: 65  RAGTGFVGDVALGVPGGDLGLGHLAFEVDDEAFGDAALAFLDPD-GVRIELGEPGRGG-- 121

Query: 263 TKITSFVDPDG 273
                F DPDG
Sbjct: 122 -VHVYFRDPDG 131

Length = 138

>gnl|CDD|176696 cd08348, BphC2-C3-RGP6_C_like, The single-domain 2,3-dihydroxybiphenyl 1,2-dioxygenases (BphC, EC 1

 Score = 43.4 bits (103), Expect = 2e-05
 Identities = 33/147 (22%), Positives = 49/147 (33%), Gaps = 22/147 (14%)

Query: 23  RFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNA-----FLGFGPEQSHFVVE 77
           R  H V  V DL+  ++FY +  G                      FL   P++ H +  
Sbjct: 1   RLSHVVLYVRDLEAMVRFYRDVLGFT---------VTDRGPLGGLVFLSRDPDEHHQIAL 51

Query: 78  LTYNYGVTSYDIGTGFGHFAIATEDVYKLVEN---IRAKGGNVTREPGPLKGGTTHIAFV 134
           +T            G  H A   + +  L +    +RA G  +T    P+  G     + 
Sbjct: 52  ITGRPAAPPPG-PAGLNHIAFEVDSLDDLRDLYERLRAAG--IT-PVWPVDHGNAWSIYF 107

Query: 135 KDPDGYIFELIQRGP-TPEPLCQVMLR 160
           +DPDG   EL    P         ML 
Sbjct: 108 RDPDGNRLELFVDTPWYVAQAAAFMLD 134

13.11.39) from Rhodococcus globerulus P6, BphC2-RGP6 and BphC3-RGP6, and similar proteins. This subfamily contains Rhodococcus globerulus P6 BphC2-RGP6 and BphC3-RGP6, and similar proteins. BphC catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, yielding 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoic acid. This is the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). This subfamily of BphCs belongs to the type I extradiol dioxygenase family, which require a metal in the active site in its catalytic mechanism. Most type I extradiol dioxygenases are activated by Fe(II). Polychlorinated biphenyl degrading bacteria demonstrate a multiplicity of BphCs. For example, three types of BphC enzymes have been found in Rhodococcus globerulus (BphC1-RGP6 - BphC3-RGP6), all three enzymes are type I extradiol dioxygenases. BphC2-RGP6 and BphC3-RGP6 are one-domain dioxygenases, which form hexamers. BphC1-RGP6 has an internal duplication, it is a two-domain dioxygenase which forms octamers, its two domains do not belong to this subfamily. Length = 134

>gnl|CDD|213698 TIGR02295, HpaD, 3,4-dihydroxyphenylacetate 2,3-dioxygenase

 Score = 45.1 bits (107), Expect = 2e-05
 Identities = 41/173 (23%), Positives = 63/173 (36%), Gaps = 30/173 (17%)

Query: 23  RFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFL-GFGPEQSHFVVELTYN 81
           R  H   RV DLD++ +FY +  G +        E      +L G    Q H +V     
Sbjct: 4   RTGHVELRVTDLDKSREFYVDLLGFR------ETESDKEYIYLRGIEEFQHHSLVLTKAP 57

Query: 82  YGVTSYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYI 141
               SY      G      ED+ K  +  +  G  V       +        V+DP GY 
Sbjct: 58  SAALSY-----IGFRVSKEEDLDKAADFFQKLGHPVRLVRDGGQPEALR---VEDPFGYP 109

Query: 142 FEL---------------IQRGPTPEPLCQVMLRVGDLGRSIKFYEKALGMKL 179
            E                  RG +P  L    + V D+ R+++FY++ LG ++
Sbjct: 110 IEFYFEMEKVERLLRRYHRHRGVSPVRLDHFNVFVPDVQRALRFYKEELGFRV 162

This enzyme catalyzes the second step in the degradation of 4-hydroxyphenylacetate to succinate and pyruvate. 4-hydroxyphenylacetate arises from the degradation of tyrosine. The substrate, 3,4-dihydroxyphenylacetate (homoprotocatechuate) arises from the action of a hydroxylase on 4-hydroxyphenylacetate. The aromatic ring is opened by this dioxygenase exo to the 3,4-diol resulting in 2-hydroxy-5-carboxymethylmuconate semialdehyde. The enzyme from Bacillus brevis contains manganese. Length = 294

>gnl|CDD|225861 COG3324, COG3324, Predicted enzyme related to lactoylglutathione lyase [General function prediction only]

 Score = 42.7 bits (101), Expect = 2e-05
 Identities = 32/119 (26%), Positives = 42/119 (35%), Gaps = 20/119 (16%)

Query: 159 LRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTE-- 216
           L V DL R+  FYEK  G       D  E +Y +     A+             G     
Sbjct: 15  LPVSDLERAKAFYEKVFGWTFEDYFDMGEMRYAVF---PADGAGAG--------GGLMAR 63

Query: 217 --YTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDG 273
                G     +  + DD+  + E V       GGK+ R     PG    I  FVDP+G
Sbjct: 64  PGSPPGGGGWVIYFAVDDIDATLERV----VAAGGKVLRPKTEFPGGGR-IAHFVDPEG 117

Length = 127

>gnl|CDD|176676 cd07253, Glo_EDI_BRP_like_2, This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

 Score = 42.2 bits (100), Expect = 3e-05
 Identities = 33/126 (26%), Positives = 56/126 (44%), Gaps = 8/126 (6%)

Query: 22  RRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYN 81
           +R  H V  V D++ T+ FYT   GM+++R  +    + +   L FG ++ +    +   
Sbjct: 2   KRIDHVVLTVADIEATLDFYTRVLGMEVVRFGE-EVGRKA---LRFGSQKINL-HPVGGE 56

Query: 82  YGVTSYDIGTGFGHFAIATEDVYK-LVENIRAKGGNVTREPGPLKG--GTTHIAFVKDPD 138
           +   +   G G     + TE     LV ++ A G  +   P P  G  G     + +DPD
Sbjct: 57  FEPAAGSPGPGSDDLCLITEPPIDELVAHLEAHGVPIEEGPVPRTGARGPITSVYFRDPD 116

Query: 139 GYIFEL 144
           G + EL
Sbjct: 117 GNLIEL 122

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping. Length = 125

>gnl|CDD|211353 cd07263, Glo_EDI_BRP_like_16, This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

 Score = 41.8 bits (99), Expect = 4e-05
 Identities = 34/128 (26%), Positives = 56/128 (43%), Gaps = 15/128 (11%)

Query: 26  HAVYRVGDLDRTIKFYTECFGMKLLRKRDVP-EEKYSNAFLGFGP---EQSHFVVELTYN 81
                V D D+ + FYTE  G ++  + DVP    +   ++   P    ++  V  L   
Sbjct: 1   LVSLYVDDQDKALAFYTEKLGFEV--REDVPMGGGFR--WVTVAPPGSPETSLV--LAPP 54

Query: 82  YGVTSYDIGT---GFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPD 138
               +   G    G     + T+D+    E ++A+G   T EP  +  GT  +A  +DPD
Sbjct: 55  ANPAAMASGLQPGGTPGLVLVTDDIDATYEELKARGVEFTEEPREMPYGT--VAVFRDPD 112

Query: 139 GYIFELIQ 146
           G +F L+Q
Sbjct: 113 GNLFVLVQ 120

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. Length = 120

>gnl|CDD|211356 cd08346, PcpA_N_like, N-terminal domain of Sphingobium chlorophenolicum 2,6-dichloro-p-hydroquinone 1,2-dioxygenase (PcpA), and similar proteins

 Score = 42.2 bits (100), Expect = 4e-05
 Identities = 31/130 (23%), Positives = 50/130 (38%), Gaps = 17/130 (13%)

Query: 26  HAVYRVGDLDRTIKFYTECFGMKLLRK---RDVPEEK---YSNAFLGFGPEQSHFVVELT 79
           H      D   T+ FYT+  G++L++K   +D P      + +     G   + F     
Sbjct: 4   HVTLVTRDAQETVDFYTDVLGLRLVKKTVNQDDPGTYHLFFGDGLGSPGTLLTFFEWPDA 63

Query: 80  YNYGVTSYDIGTG-FGH--FAIATED-VYKLVENIRAKGGNVTREPGPLKGGTTHIAFVK 135
              G      G G   H  F++ +E  +    E +RA G  V+   G +        + +
Sbjct: 64  GPKGRR----GPGQIHHIAFSVPSEASLEAWRERLRAAGVPVS---GVVDRFGERSLYFE 116

Query: 136 DPDGYIFELI 145
           DPDG   EL 
Sbjct: 117 DPDGIRLELT 126

The N-terminal domain of Sphingobium chlorophenolicum (formerly Sphingomonas chlorophenolica) 2,6-dichloro-p-hydroquinone1,2-dioxygenase (PcpA), and similar proteins. PcpA is a key enzyme in the pentachlorophenol (PCP) degradation pathway, catalyzing the conversion of 2,6-dichloro-p-hydroquinone to 2-chloromaleylacetate. This domain belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. Length = 126

>gnl|CDD|222305 pfam13669, Glyoxalase_4, Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily

 Score = 40.7 bits (96), Expect = 9e-05
 Identities = 25/110 (22%), Positives = 37/110 (33%), Gaps = 3/110 (2%)

Query: 26  HAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVT 85
           H    V DLD    F+ +  G+          +    AF   G +     VEL       
Sbjct: 2   HIGIVVPDLDAAAAFWVDLLGLGPWGDYRDEPQNVDLAFARLG-DGPAVEVELIQPLDGE 60

Query: 86  SYDI--GTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAF 133
           S+    G G  H A   +D+   V  + A+G  V  +          +AF
Sbjct: 61  SFLDKGGPGLHHIAYWVDDLDAAVARLEAQGVRVAPKGPRAGAAGRRVAF 110

Length = 110

>gnl|CDD|225861 COG3324, COG3324, Predicted enzyme related to lactoylglutathione lyase [General function prediction only]

 Score = 40.0 bits (94), Expect = 2e-04
 Identities = 31/123 (25%), Positives = 42/123 (34%), Gaps = 20/123 (16%)

Query: 30  RVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAF------LGFGPEQSHFVVELTYNYG 83
            V DL+R   FY + FG       D+ E +Y+          G    +           G
Sbjct: 16  PVSDLERAKAFYEKVFGWTFEDYFDMGEMRYAVFPADGAGAGGGLMARPGSPPGGG---G 72

Query: 84  VTSYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFE 143
              Y           A +D+   +E + A GG V R      GG     FV DP+G  F 
Sbjct: 73  WVIY----------FAVDDIDATLERVVAAGGKVLRPKTEFPGGGRIAHFV-DPEGNRFG 121

Query: 144 LIQ 146
           L  
Sbjct: 122 LWS 124

Length = 127

>gnl|CDD|211355 cd08343, ED_TypeI_classII_C, C-terminal domain of type I, class II extradiol dioxygenases; catalytic domain

 Score = 40.4 bits (95), Expect = 2e-04
 Identities = 32/124 (25%), Positives = 50/124 (40%), Gaps = 16/124 (12%)

Query: 26  HAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVT 85
           H V R  D+  T  FYT+  G + +  R       + A+L    ++ H +        + 
Sbjct: 2   HVVLRTPDVAATRAFYTDVLGFR-VSDRVGDPGVLAAAWLRCD-DEHHDL-------ALF 52

Query: 86  SYDIGTGFGHFAIATE---DVYKLVENIRAKGGNVTREPGPLKGGTTHIAF--VKDPDGY 140
               G G  H A   E   D+ +  + + A G  +  E GP + G  +  F   +DPDG 
Sbjct: 53  PGPEGPGLHHVAFEVESLDDIKRAGDRLAANG--IQIEWGPGRHGPGNNLFLYFRDPDGN 110

Query: 141 IFEL 144
             EL
Sbjct: 111 RIEL 114

This family contains the C-terminal, catalytic domain of type I, class II extradiol dioxygenases. Dioxygenases catalyze the incorporation of both atoms of molecular oxygen into substrates using a variety of reaction mechanisms, resulting in the cleavage of aromatic rings. Two major groups of dioxygenases have been identified according to the cleavage site; extradiol enzymes cleave the aromatic ring between a hydroxylated carbon and an adjacent non-hydroxylated carbon, whereas intradiol enzymes cleave the aromatic ring between two hydroxyl groups. Extradiol dioxygenases are classified into type I and type II enzymes. Type I extradiol dioxygenases include class I and class II enzymes. These two classes of enzymes show sequence similarity; the two-domain class II enzymes evolved from a class I enzyme through gene duplication. The extradiol dioxygenases represented in this family are type I, class II enzymes, and are composed of the N- and C-terminal domains of similar structure fold, resulting from an ancient gene duplication. The active site is located in a funnel-shaped space of the C-terminal domain. A catalytically essential metal, Fe(II) or Mn(II), presents in all the enzymes in this family. Length = 131

>gnl|CDD|211357 cd08349, BLMA_like, Bleomycin binding protein (BLMA) and similar proteins; BLMA confers bleomycin (Bm) resistance by directly binding to Bm

 Score = 39.9 bits (94), Expect = 2e-04
 Identities = 28/115 (24%), Positives = 44/115 (38%), Gaps = 11/115 (9%)

Query: 28  VYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSY 87
           V  V D+++++ FY +  G ++  +   PE  Y  A +     Q H              
Sbjct: 3   VLPVSDIEKSLAFYRDVLGFEVDFEH--PEPLY--AQVSRDGAQLHL--SEHDGDEWVPL 56

Query: 88  DIGTGFGHFAIATEDVYKLVENIRAKG-GNVTREPGPLKGGTTHIAFVKDPDGYI 141
             G       I  +DV  L   ++AKG   +   P     G    A V+DPDG +
Sbjct: 57  GRGGN---VYIEVDDVDALYAELKAKGAKLIVYPPEDQPWGQREFA-VQDPDGNL 107

BLMA also called Bleomycin resistance protein, confers Bm resistance by directly binding to Bm. Bm is a glycopeptide antibiotic produced naturally by actinomycetes. It is a potent anti-cancer drug, which acts as a strong DNA-cutting agent, thereby causing cell death. BLMA is produced by actinomycetes to protect themselves against their own lethal compound. BLMA has two identically-folded subdomains, with the same alpha/beta fold; these two halves have no sequence similarity. BLMAs are dimers and each dimer binds to two Bm molecules at the Bm-binding pockets formed at the dimer interface; two Bm molecules are bound per dimer. BLMA belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. As for the larger superfamily, this family contains members with or without domain swapping. Length = 112

>gnl|CDD|211351 cd07251, Glo_EDI_BRP_like_10, This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

 Score = 39.8 bits (94), Expect = 2e-04
 Identities = 29/124 (23%), Positives = 47/124 (37%), Gaps = 22/124 (17%)

Query: 31  VGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIG 90
           V DL R+  FY    G K     D  +     AF   G      V+ L +     + D G
Sbjct: 6   VADLARSRAFYRA-GGWK--TSADSNDGV---AFFQLG----GLVLAL-FPREELAKDAG 54

Query: 91  -----TGFGHFAIA-----TEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGY 140
                 GF    +A      ++V  ++    A G  + + P  +  G     +  DPDG+
Sbjct: 55  VPVPPPGFSGITLAHNVRSEDEVDAVLARAAAAGATIVKPPQKVFWGGYS-GYFADPDGH 113

Query: 141 IFEL 144
           ++E+
Sbjct: 114 LWEV 117

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. Length = 120

>gnl|CDD|176693 cd08345, Fosfomycin_RP, Fosfomycin resistant protein; inhibits the biological function of fosfomycin

 Score = 39.5 bits (92), Expect = 2e-04
 Identities = 32/122 (26%), Positives = 53/122 (43%), Gaps = 17/122 (13%)

Query: 26  HAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKY---SNAFLGFGPEQSHFVVELTYNY 82
           H    V DL+++I FY +  G +L+      +E Y   +  ++    E S    E TY +
Sbjct: 1   HITLIVKDLNKSIAFYRDILGAELIYSSS--KEAYFELAGLWICLMEEDSLQGPERTYTH 58

Query: 83  GVTSYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIF 142
                        F I +E+  +  E ++A G  +  E   ++G    I F  DPDG++ 
Sbjct: 59  IA-----------FQIQSEEFDEYTERLKALGVEMKPERPRVQGEGRSIYFY-DPDGHLL 106

Query: 143 EL 144
           EL
Sbjct: 107 EL 108

This family contains three types of fosfomycin resistant protein. Fosfomycin inhibits the enzyme UDP-N-acetylglucosamine-3-enolpyruvyltransferase (MurA), which catalyzes the first committed step in bacterial cell wall biosynthesis. The three types of fosfomycin resistance proteins, employ different mechanisms to render fosfomycin [(1R,2S)-epoxypropylphosphonic acid] inactive. FosB catalyzes the addition of L-cysteine to the epoxide ring of fosfomycin. FosX catalyzes the addition of a water molecule to the C1 position of the antibiotic with inversion of configuration at C1. FosA catalyzes the addition of glutathione to the antibiotic fosfomycin, making it inactive. Catalytic activities of both FosX and FosA are Mn(II)-dependent, but FosB is activated by Mg(II). Fosfomycin resistant proteins are evolutionarily related to glyoxalase I and type I extradiol dioxygenases. Length = 113

>gnl|CDD|176671 cd07247, SgaA_N_like, N-terminal domain of Streptomyces griseus SgaA (suppression of growth disturbance caused by A-factor at a high concentration under high osmolality during early growth phase), and similar domains

 Score = 39.5 bits (93), Expect = 3e-04
 Identities = 24/115 (20%), Positives = 37/115 (32%), Gaps = 13/115 (11%)

Query: 159 LRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYT 218
           L   D  R+  FY    G      +      Y   +          +++           
Sbjct: 6   LPTTDPERAKAFYGAVFGWT-FEDMGDGGGDYA--VFSTGGGAVGGLMKAP-----EPAA 57

Query: 219 KGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDG 273
                  V  + DDV  +A  V    +  GGK+   P  IPG+  +   F DP+G
Sbjct: 58  GSPPGWLVYFAVDDVDAAAARV----EAAGGKVLVPPTDIPGV-GRFAVFADPEG 107

SgaA suppresses the growth disturbances caused by high osmolarity and a high concentration of A-factor, a microbial hormone, during the early growth phase in Streptomyces griseus. A-factor (2-isocapryloyl-3R-hydroxymethyl-gamma-butyrolactone) controls morphological differentiation and secondary metabolism in Streptomyces griseus. It is a chemical signaling molecule that at a very low concentration acts as a switch for yellow pigment production, aerial mycelium formation, streptomycin production, and streptomycin resistance. The structure and amino acid sequence of SgaA are closely related to a group of antibiotics resistance proteins, including bleomycin resistance protein, mitomycin resistance protein, and fosfomycin resistance proteins. SgaA might also function as a streptomycin resistance protein. Length = 114

>gnl|CDD|222152 pfam13468, Glyoxalase_3, Glyoxalase-like domain

 Score = 39.2 bits (92), Expect = 7e-04
 Identities = 35/150 (23%), Positives = 50/150 (33%), Gaps = 31/150 (20%)

Query: 26  HAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFG----------PEQS--- 72
           H V  V DLD  +  + +  G  L      P     NA L FG          PE     
Sbjct: 3   HLVVAVPDLDEAVARFEDRLGFTLTPGGRHPGMGTHNALLYFGDGYLELLAIDPEAPAPD 62

Query: 73  ---HFVVELTYNYGVTSYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGT- 128
               F ++            G G   +A+ T+D+  +   +RA G +         GG  
Sbjct: 63  GGRWFGLDRL--------AGGPGLSGWALRTDDIDAVAARLRAAGLDFGG-RVRPDGGDL 113

Query: 129 -THIAFVKDPD---GYIF-ELIQRGPTPEP 153
              +A   D D   G +   LIQ G +   
Sbjct: 114 RWRLAVPADGDLPAGGLLPFLIQWGTSHPA 143

This domain is related to the Glyoxalase domain pfam00903. Length = 174

>gnl|CDD|176683 cd07262, Glo_EDI_BRP_like_19, This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

 Score = 38.3 bits (90), Expect = 7e-04
 Identities = 31/126 (24%), Positives = 43/126 (34%), Gaps = 18/126 (14%)

Query: 24  FLHAVYRVGDLDRTIKFYTECF---GMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTY 80
             H    V DL+R   FY       G+K +        +     +G+G         +T 
Sbjct: 1   IDHVTLGVNDLERARAFYDAVLAPLGIKRVM-------EDGPGAVGYGKGGGGPDFWVTK 53

Query: 81  NYGVTSYDIGTGFGHFAIATEDVYKLVENIRAK----GGNVTREPG--PLKGGTTHIAFV 134
            +       G G  H A A       V+   A     GG     PG  P  G   + A+V
Sbjct: 54  PFDGEPATAGNGT-HVAFAAPSREA-VDAFHAAALAAGGTDEGAPGLRPHYGPGYYAAYV 111

Query: 135 KDPDGY 140
           +DPDG 
Sbjct: 112 RDPDGN 117

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. Length = 123

>gnl|CDD|211352 cd07255, Glo_EDI_BRP_like_12, This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

 Score = 37.9 bits (89), Expect = 0.001
 Identities = 13/26 (50%), Positives = 18/26 (69%)

Query: 156 QVMLRVGDLGRSIKFYEKALGMKLLR 181
            V LRV DL RS+ FY+  LG+++L 
Sbjct: 5   AVTLRVADLERSLAFYQDVLGLEVLE 30

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. Length = 125

>gnl|CDD|211358 cd08352, Glo_EDI_BRP_like_1, This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

 Score = 38.1 bits (89), Expect = 0.001
 Identities = 38/118 (32%), Positives = 49/118 (41%), Gaps = 9/118 (7%)

Query: 33  DLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTY--NYGV-TSYDI 89
           D  R+ +FY E  G+ L+R+   PE K     L    E     +EL    N     SY  
Sbjct: 13  DYARSKEFYVEVLGLTLIRETYRPERKSYKLDLALNGEY---QIELFSFPNPPPRPSYPE 69

Query: 90  GTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGT-THIAFVKDPDGYIFELIQ 146
             G  H A A ED+   V  ++A G  V  EP  +   T     F  DPDG   EL +
Sbjct: 70  ACGLRHLAFAVEDIEAAVAELKAHG--VEVEPIRVDEFTGKRFTFFYDPDGLPLELYE 125

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping. Length = 125

>gnl|CDD|132684 TIGR03645, glyox_marine, lactoylglutathione lyase family protein

 Score = 36.7 bits (85), Expect = 0.004
 Identities = 45/158 (28%), Positives = 59/158 (37%), Gaps = 47/158 (29%)

Query: 22  RRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLG------FGPEQSHF- 74
           R F H    V DLD  +KFYTE  G  L+      E    ++ +G      FG     F 
Sbjct: 3   RTFSHIGISVPDLDAAVKFYTEVLGWYLI--MPPTEIVEDDSAIGEMCTDVFGEGWGSFK 60

Query: 75  VVELTYNYGVTSYDIG--------------------TGFGHFAIATEDVYKLVENIRAKG 114
           +  L+     T   IG                    TG  HF +   DV  L E I A G
Sbjct: 61  IAHLS-----TGDRIGVELFEFKNQENPEDNFEYWKTGVFHFCVQDPDVEGLAERIVAAG 115

Query: 115 GN----VTRE--PG--PLKGGTTHIAFVKDPDGYIFEL 144
           G     V R   PG  P +     + +++DP G I E+
Sbjct: 116 GKKRMPVPRYYYPGEKPYR-----MIYMEDPFGNILEI 148

Members of this protein family share homology with lactoylglutathione lyase (glyoxalase I) and are found mainly in marine members of the gammaproteobacteria, including CPS_0532 from Colwellia psychrerythraea 34H. This family excludes a well-separated, more narrowly distributed paralogous family, exemplified by CPS_3492 from C. psychrerythraea. The function is of this protein family is unknown. Length = 162

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	291
PLN02300	286	lactoylglutathione lyase	100.0
TIGR03211	303	catechol_2_3 catechol 2,3 dioxygenase. Members of	100.0
TIGR02295	294	HpaD 3,4-dihydroxyphenylacetate 2,3-dioxygenase. T	100.0
KOG2943	299	consensus Predicted glyoxalase [Carbohydrate trans	100.0
TIGR03213	286	23dbph12diox 2,3-dihydroxybiphenyl 1,2-dioxygenase	100.0
TIGR01263	353	4HPPD 4-hydroxyphenylpyruvate dioxygenase. This pr	99.92
PLN02875	398	4-hydroxyphenylpyruvate dioxygenase	99.88
TIGR00068	150	glyox_I lactoylglutathione lyase. Glyoxylase I is	99.87
TIGR00068	150	glyox_I lactoylglutathione lyase. Glyoxylase I is	99.86
PLN02367	233	lactoylglutathione lyase	99.86
COG2514	265	Predicted ring-cleavage extradiol dioxygenase [Gen	99.86
PRK10291	129	glyoxalase I; Provisional	99.84
PLN02367	233	lactoylglutathione lyase	99.83
PRK10291	129	glyoxalase I; Provisional	99.83
cd08342	136	HPPD_N_like N-terminal domain of 4-hydroxyphenylpy	99.83
PLN03042	185	Lactoylglutathione lyase; Provisional	99.82
PLN03042	185	Lactoylglutathione lyase; Provisional	99.82
KOG0638	381	consensus 4-hydroxyphenylpyruvate dioxygenase [Ami	99.81
cd08353	142	Glo_EDI_BRP_like_7 This conserved domain belongs t	99.81
PRK11478	129	putative lyase; Provisional	99.8
cd07233	121	Glyoxalase_I Glyoxalase I catalyzes the isomerizat	99.8
cd08353	142	Glo_EDI_BRP_like_7 This conserved domain belongs t	99.8
cd07233	121	Glyoxalase_I Glyoxalase I catalyzes the isomerizat	99.79
PLN02300	286	lactoylglutathione lyase	99.79
cd08342	136	HPPD_N_like N-terminal domain of 4-hydroxyphenylpy	99.78
cd08358	127	Glo_EDI_BRP_like_21 This conserved domain belongs	99.78
cd08358	127	Glo_EDI_BRP_like_21 This conserved domain belongs	99.78
cd08352	125	Glo_EDI_BRP_like_1 This conserved domain belongs t	99.77
cd07241	125	Glo_EDI_BRP_like_3 This conserved domain belongs t	99.77
PRK11478	129	putative lyase; Provisional	99.77
PRK04101	139	fosfomycin resistance protein FosB; Provisional	99.76
cd07243	143	2_3_CTD_C C-terminal domain of catechol 2,3-dioxyg	99.76
cd07241	125	Glo_EDI_BRP_like_3 This conserved domain belongs t	99.76
TIGR03645	162	glyox_marine lactoylglutathione lyase family prote	99.76
cd07257	153	THT_oxygenase_C The C-terminal domain of 2,4,5-Tri	99.76
TIGR03645	162	glyox_marine lactoylglutathione lyase family prote	99.75
cd07257	153	THT_oxygenase_C The C-terminal domain of 2,4,5-Tri	99.75
cd07243	143	2_3_CTD_C C-terminal domain of catechol 2,3-dioxyg	99.75
cd07265	122	2_3_CTD_N N-terminal domain of catechol 2,3-dioxyg	99.75
cd08360	134	MhqB_like_C C-terminal domain of Burkholderia sp.	99.75
cd08352	125	Glo_EDI_BRP_like_1 This conserved domain belongs t	99.74
COG3185	363	4-hydroxyphenylpyruvate dioxygenase and related he	99.74
TIGR03081	128	metmalonyl_epim methylmalonyl-CoA epimerase. Membe	99.73
cd07256	161	HPCD_C_class_II C-terminal domain of 3,4-dihydroxy	99.73
cd09011	120	Glo_EDI_BRP_like_23 This conserved domain belongs	99.73
TIGR03081	128	metmalonyl_epim methylmalonyl-CoA epimerase. Membe	99.73
cd08360	134	MhqB_like_C C-terminal domain of Burkholderia sp.	99.73
cd07247	114	SgaA_N_like N-terminal domain of Streptomyces gris	99.73
cd07237	154	BphC1-RGP6_C_like C-terminal domain of 2,3-dihydro	99.72
cd07265	122	2_3_CTD_N N-terminal domain of catechol 2,3-dioxyg	99.72
PF00903	128	Glyoxalase: Glyoxalase/Bleomycin resistance protei	99.72
cd07258	141	PpCmtC_C C-terminal domain of 2,3-dihydroxy-p-cuma	99.71
cd07237	154	BphC1-RGP6_C_like C-terminal domain of 2,3-dihydro	99.71
cd09014	166	BphC-JF8_C_like C-terminal, catalytic, domain of B	99.71
cd08361	124	PpCmtC_N N-terminal domain of 2,3-dihydroxy-p-cuma	99.71
PRK06724	128	hypothetical protein; Provisional	99.7
cd09013	121	BphC-JF8_N_like N-terminal, non-catalytic, domain	99.7
cd07247	114	SgaA_N_like N-terminal domain of Streptomyces gris	99.7
cd07263	119	Glo_EDI_BRP_like_16 This conserved domain belongs	99.7
PRK04101	139	fosfomycin resistance protein FosB; Provisional	99.7
cd07253	125	Glo_EDI_BRP_like_2 This conserved domain belongs t	99.7
cd09011	120	Glo_EDI_BRP_like_23 This conserved domain belongs	99.7
cd08343	131	ED_TypeI_classII_C C-terminal domain of type I, cl	99.7
cd08355	122	Glo_EDI_BRP_like_14 This conserved domain belongs	99.69
cd07263	119	Glo_EDI_BRP_like_16 This conserved domain belongs	99.69
cd07266	121	HPCD_N_class_II N-terminal domain of 3,4-dihydroxy	99.69
cd08364	131	FosX FosX, a fosfomycin resistance protein, cataly	99.69
cd08363	131	FosB FosB, a fosfomycin resistance protein, cataly	99.69
cd08355	122	Glo_EDI_BRP_like_14 This conserved domain belongs	99.69
cd08363	131	FosB FosB, a fosfomycin resistance protein, cataly	99.69
cd07256	161	HPCD_C_class_II C-terminal domain of 3,4-dihydroxy	99.68
cd07249	128	MMCE Methylmalonyl-CoA epimerase (MMCE). MMCE, als	99.68
cd08347	157	PcpA_C_like C-terminal domain of Sphingobium chlor	99.68
PF00903	128	Glyoxalase: Glyoxalase/Bleomycin resistance protei	99.68
cd07239	144	BphC5-RK37_C_like C-terminal, catalytic, domain of	99.68
cd09013	121	BphC-JF8_N_like N-terminal, non-catalytic, domain	99.68
cd08343	131	ED_TypeI_classII_C C-terminal domain of type I, cl	99.68
cd07264	125	Glo_EDI_BRP_like_15 This conserved domain belongs	99.68
cd08351	123	ChaP_like ChaP, an enzyme involved in the biosynth	99.67
cd07240	117	ED_TypeI_classII_N N-terminal domain of type I, cl	99.67
cd07255	125	Glo_EDI_BRP_like_12 This conserved domain belongs	99.67
cd08347	157	PcpA_C_like C-terminal domain of Sphingobium chlor	99.67
cd09014	166	BphC-JF8_C_like C-terminal, catalytic, domain of B	99.67
cd07246	122	Glo_EDI_BRP_like_8 This conserved domain belongs t	99.67
cd07253	125	Glo_EDI_BRP_like_2 This conserved domain belongs t	99.67
cd07246	122	Glo_EDI_BRP_like_8 This conserved domain belongs t	99.67
cd07252	120	BphC1-RGP6_N_like N-terminal domain of 2,3-dihydro	99.67
cd08361	124	PpCmtC_N N-terminal domain of 2,3-dihydroxy-p-cuma	99.67
cd08346	126	PcpA_N_like N-terminal domain of Sphingobium chlor	99.67
cd07264	125	Glo_EDI_BRP_like_15 This conserved domain belongs	99.66
cd07249	128	MMCE Methylmalonyl-CoA epimerase (MMCE). MMCE, als	99.66
cd07258	141	PpCmtC_C C-terminal domain of 2,3-dihydroxy-p-cuma	99.66
cd08359	119	Glo_EDI_BRP_like_22 This conserved domain belongs	99.66
cd07266	121	HPCD_N_class_II N-terminal domain of 3,4-dihydroxy	99.66
cd08359	119	Glo_EDI_BRP_like_22 This conserved domain belongs	99.66
cd07267	113	THT_Oxygenase_N N-terminal domain of 2,4,5-trihydr	99.66
cd08346	126	PcpA_N_like N-terminal domain of Sphingobium chlor	99.66
cd07245	114	Glo_EDI_BRP_like_9 This conserved domain belongs t	99.65
cd07239	144	BphC5-RK37_C_like C-terminal, catalytic, domain of	99.65
cd07252	120	BphC1-RGP6_N_like N-terminal domain of 2,3-dihydro	99.65
PF12681	108	Glyoxalase_2: Glyoxalase-like domain; PDB: 3G12_B	99.65
cd07242	128	Glo_EDI_BRP_like_6 This conserved domain belongs t	99.65
cd07255	125	Glo_EDI_BRP_like_12 This conserved domain belongs	99.65
cd07245	114	Glo_EDI_BRP_like_9 This conserved domain belongs t	99.65
cd08351	123	ChaP_like ChaP, an enzyme involved in the biosynth	99.65
cd08362	120	BphC5-RrK37_N_like N-terminal, non-catalytic, doma	99.65
PF12681	108	Glyoxalase_2: Glyoxalase-like domain; PDB: 3G12_B	99.64
cd08364	131	FosX FosX, a fosfomycin resistance protein, cataly	99.64
cd07242	128	Glo_EDI_BRP_like_6 This conserved domain belongs t	99.64
PRK06724	128	hypothetical protein; Provisional	99.64
cd08348	134	BphC2-C3-RGP6_C_like The single-domain 2,3-dihydro	99.63
cd07238	112	Glo_EDI_BRP_like_5 This conserved domain belongs t	99.63
cd07240	117	ED_TypeI_classII_N N-terminal domain of type I, cl	99.63
cd07238	112	Glo_EDI_BRP_like_5 This conserved domain belongs t	99.62
cd08348	134	BphC2-C3-RGP6_C_like The single-domain 2,3-dihydro	99.62
cd08362	120	BphC5-RrK37_N_like N-terminal, non-catalytic, doma	99.62
cd08349	112	BLMA_like Bleomycin binding protein (BLMA) and sim	99.62
cd08345	113	Fosfomycin_RP Fosfomycin resistant protein; inhibi	99.62
COG3324	127	Predicted enzyme related to lactoylglutathione lya	99.62
cd07267	113	THT_Oxygenase_N N-terminal domain of 2,4,5-trihydr	99.61
TIGR03211	303	catechol_2_3 catechol 2,3 dioxygenase. Members of	99.61
cd07262	123	Glo_EDI_BRP_like_19 This conserved domain belongs	99.6
cd07244	121	FosA FosA, a Fosfomycin resistance protein, cataly	99.6
cd08345	113	Fosfomycin_RP Fosfomycin resistant protein; inhibi	99.6
cd08350	120	BLMT_like BLMT, a bleomycin resistance protein enc	99.59
cd07244	121	FosA FosA, a Fosfomycin resistance protein, cataly	99.59
cd07235	122	MRD Mitomycin C resistance protein (MRD). Mitomyci	99.59
TIGR02295	294	HpaD 3,4-dihydroxyphenylacetate 2,3-dioxygenase. T	99.59
cd07262	123	Glo_EDI_BRP_like_19 This conserved domain belongs	99.59
cd08349	112	BLMA_like Bleomycin binding protein (BLMA) and sim	99.59
cd08354	122	Glo_EDI_BRP_like_13 This conserved domain belongs	99.59
cd07261	114	Glo_EDI_BRP_like_11 This conserved domain belongs	99.59
cd07254	120	Glo_EDI_BRP_like_20 This conserved domain belongs	99.59
cd07235	122	MRD Mitomycin C resistance protein (MRD). Mitomyci	99.58
KOG2943	299	consensus Predicted glyoxalase [Carbohydrate trans	99.58
cd09012	124	Glo_EDI_BRP_like_24 This conserved domain belongs	99.58
cd08357	125	Glo_EDI_BRP_like_18 This conserved domain belongs	99.58
cd08354	122	Glo_EDI_BRP_like_13 This conserved domain belongs	99.57
cd07261	114	Glo_EDI_BRP_like_11 This conserved domain belongs	99.57
cd06587	112	Glo_EDI_BRP_like This domain superfamily is found	99.57
cd08350	120	BLMT_like BLMT, a bleomycin resistance protein enc	99.57
cd06587	112	Glo_EDI_BRP_like This domain superfamily is found	99.57
cd08344	112	MhqB_like_N N-terminal domain of MhqB, a type I ex	99.57
cd07254	120	Glo_EDI_BRP_like_20 This conserved domain belongs	99.57
cd08344	112	MhqB_like_N N-terminal domain of MhqB, a type I ex	99.57
COG3324	127	Predicted enzyme related to lactoylglutathione lya	99.56
cd08357	125	Glo_EDI_BRP_like_18 This conserved domain belongs	99.56
cd09012	124	Glo_EDI_BRP_like_24 This conserved domain belongs	99.56
TIGR03213	286	23dbph12diox 2,3-dihydroxybiphenyl 1,2-dioxygenase	99.55
PF13669	109	Glyoxalase_4: Glyoxalase/Bleomycin resistance prot	99.55
cd08356	113	Glo_EDI_BRP_like_17 This conserved domain belongs	99.54
cd07251	121	Glo_EDI_BRP_like_10 This conserved domain belongs	99.52
cd08356	113	Glo_EDI_BRP_like_17 This conserved domain belongs	99.51
PF13669	109	Glyoxalase_4: Glyoxalase/Bleomycin resistance prot	99.51
cd07251	121	Glo_EDI_BRP_like_10 This conserved domain belongs	99.49
KOG2944	170	consensus Glyoxalase [Carbohydrate transport and m	99.44
KOG2944	170	consensus Glyoxalase [Carbohydrate transport and m	99.41
COG2514	265	Predicted ring-cleavage extradiol dioxygenase [Gen	99.38
cd07250	191	HPPD_C_like C-terminal domain of 4-hydroxyphenylpy	99.31
cd07250	191	HPPD_C_like C-terminal domain of 4-hydroxyphenylpy	99.3
COG3565	138	Predicted dioxygenase of extradiol dioxygenase fam	99.22
COG2764	136	PhnB Uncharacterized protein conserved in bacteria	99.18
COG3565	138	Predicted dioxygenase of extradiol dioxygenase fam	99.15
cd06588	128	PhnB_like Escherichia coli PhnB and similar protei	99.14
COG2764	136	PhnB Uncharacterized protein conserved in bacteria	99.14
cd06588	128	PhnB_like Escherichia coli PhnB and similar protei	99.12
TIGR01263	353	4HPPD 4-hydroxyphenylpyruvate dioxygenase. This pr	99.11
PF13468	175	Glyoxalase_3: Glyoxalase-like domain; PDB: 3P8A_B.	99.07
COG3607	133	Predicted lactoylglutathione lyase [General functi	98.98
COG0346	138	GloA Lactoylglutathione lyase and related lyases [	98.98
COG0346	138	GloA Lactoylglutathione lyase and related lyases [	98.95
PF14696	139	Glyoxalase_5: Hydroxyphenylpyruvate dioxygenase, H	98.92
PLN02875	398	4-hydroxyphenylpyruvate dioxygenase	98.89
COG3607	133	Predicted lactoylglutathione lyase [General functi	98.81
KOG0638	381	consensus 4-hydroxyphenylpyruvate dioxygenase [Ami	98.7
PF14506	125	CppA_N: CppA N-terminal; PDB: 3E0R_D.	98.68
PRK01037	357	trmD tRNA (guanine-N(1)-)-methyltransferase/unknow	98.65
PRK01037	357	trmD tRNA (guanine-N(1)-)-methyltransferase/unknow	98.6
PRK10148	147	hypothetical protein; Provisional	98.46
PF14506	125	CppA_N: CppA N-terminal; PDB: 3E0R_D.	98.45
PRK10148	147	hypothetical protein; Provisional	98.44
COG3185	363	4-hydroxyphenylpyruvate dioxygenase and related he	98.24
PF14696	139	Glyoxalase_5: Hydroxyphenylpyruvate dioxygenase, H	98.14
PF13468	175	Glyoxalase_3: Glyoxalase-like domain; PDB: 3P8A_B.	97.89
PF06983	116	3-dmu-9_3-mt: 3-demethylubiquinone-9 3-methyltrans	96.95
PF06983	116	3-dmu-9_3-mt: 3-demethylubiquinone-9 3-methyltrans	96.56
PF15067	236	FAM124: FAM124 family	95.9
PF15067	236	FAM124: FAM124 family	95.2
PF14507	101	CppA_C: CppA C-terminal; PDB: 3E0R_D.	94.94
PF14507	101	CppA_C: CppA C-terminal; PDB: 3E0R_D.	94.53
COG3865	151	Uncharacterized protein conserved in bacteria [Fun	86.38

>PLN02300 lactoylglutathione lyase

Probab=100.00  E-value=3.8e-44  Score=301.89  Aligned_cols=283  Identities=80%  Similarity=1.318  Sum_probs=229.6

Q ss_pred             CCCCcccccccccCCCCCcceeeEEEEEEeCCHHHHHHHHHhhcCCEEEEEeecCCCceeEEEEecCCCCcceEEEeeec
Q 022818            2 AEASPAAANAELLEWPKKDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYN   81 (291)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~~~~i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~   81 (291)
                      |.+|++.+.+...+++++.+.+|.|++|.|+|++++++||+++|||++..+...++..+...++..++...++.+++...
T Consensus         3 ~~~~~~~~~~~~~~~~~~~i~~l~Hv~l~V~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~   82 (286)
T PLN02300          3 AAASTAAEAEDLLEWPKKDKRRMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSNFVVELTYN   82 (286)
T ss_pred             cccccChhhhhhhcCCccccceEEEEEEEeCCHHHHHHHHHHhcCCEEEEeeecCCCcEEEEEEccCCCCCceEEEEecc
Confidence            34667777778889998999999999999999999999999999999987655555555566776655445666777654


Q ss_pred             CCCCcccCCCCceEEEEEeCCHHHHHHHHHHcCCeeecCCeecCCCceEEEEEECCCCCEEEEEeCCCCCCCceEEEeee
Q 022818           82 YGVTSYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRGPTPEPLCQVMLRV  161 (291)
Q Consensus        82 ~~~~~~~~g~~~~~i~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~Dp~G~~iel~~~~~~~~~~~~v~l~v  161 (291)
                      ........+.+..|++|.|+|+++++++|+++|+++...|...++|..+++||+||+|+.|||++....+.++.|+.|.|
T Consensus        83 ~~~~~~~~~~g~~hia~~v~dvd~~~~~l~~~G~~i~~~~~~~~~g~~~~~~~~DPdG~~iEl~~~~~~~~~~~~~~l~~  162 (286)
T PLN02300         83 YGVDKYDIGTGFGHFGIAVEDVAKTVELVKAKGGKVTREPGPVKGGKSVIAFVKDPDGYKFELIQRGPTPEPLCQVMLRV  162 (286)
T ss_pred             CCCCccccCCCccEEEEEeCCHHHHHHHHHHCCCeeecCCcccCCCceEEEEEECCCCCEEEEEeCCCCCCcceeEEEEe
Confidence            43333334568899999999999999999999999888877777665556899999999999999988888999999999


Q ss_pred             CChhhhHHHHHHhcCCeeeeeeccCCccceEEEeccccCCceeEEEEeeecCcceeecCcceeEEEEEecchHHhHHHHH
Q 022818          162 GDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDVYKSAEVVN  241 (291)
Q Consensus       162 ~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~hi~~~v~di~~~~~~l~  241 (291)
                      +|++++.+||+++|||++......++.+|...++..........+++..+.+......+++.+|++|.|+|++++++++ 
T Consensus       163 ~d~~~a~~Fy~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~~~~~g~~~~~i~~~v~di~~~~~~~-  241 (286)
T PLN02300        163 GDLDRSIKFYEKAFGMKLLRKRDNPEYKYTIAMMGYGPEDKTTVLELTYNYGVTEYTKGNAYAQIAIGTDDVYKTAEAI-  241 (286)
T ss_pred             CCHHHHHHHHHhccCCEEEeeecccccceEEEEEecCCCCCccEEEEeecCCCCccccCCceeEEEEecCCHHHHHHHH-
Confidence            9999999999999999987655555556777766543322234566655443333345678999999999999999999 


Q ss_pred             HHHHHhCCeeecCCccCCCCCceEEEEECCCCceEEEeechhhhhhh
Q 022818          242 LVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNEDFLKEL  288 (291)
Q Consensus       242 ~~~~~~G~~~~~~~~~~~~~~~~~~~~~DpdG~~iel~~~~~~~~~~  288 (291)
                         +++|+++..+|...|+.+++.++|+||||+.|+|+++.++.|+|
T Consensus       242 ---~~~G~~v~~~p~~~p~~~~~~~~~~DPdG~~i~~~~~~~~~~~~  285 (286)
T PLN02300        242 ---KLVGGKITREPGPLPGINTKITACLDPDGWKTVFVDNIDFLKEL  285 (286)
T ss_pred             ---HHcCCeEecCCccCCCCceEEEEEECCCCCEEEEEccchhhhhc
Confidence               99999999998888865568899999999999999999999886

>TIGR03211 catechol_2_3 catechol 2,3 dioxygenase

Probab=100.00  E-value=4.7e-32  Score=230.95  Aligned_cols=233  Identities=22%  Similarity=0.266  Sum_probs=162.0

Q ss_pred             ceeeEEEEEEeCCHHHHHHHHHhhcCCEEEEEeecCCCceeEEEEecCCCCcceEEEeeecCCCCcccCCCCceEEEEEe
Q 022818           21 KRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIAT  100 (291)
Q Consensus        21 ~~~i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~~~~i~~~v  100 (291)
                      +++|+|+.|.|+|++++++||+++|||++..+...      .+++.......+..+.+...       ...++.|++|.|
T Consensus         2 i~~i~Hi~l~V~Dle~s~~FY~~~LG~~~~~~~~~------~~~~~~~~~~~~~~~~l~~~-------~~~g~~hiaf~v   68 (303)
T TIGR03211         2 VMRLGHVELRVLDLEESLKHYTDVLGLEETGRDGQ------RVYLKAWDEWDHYSVILTEA-------DTAGLDHMAFKV   68 (303)
T ss_pred             cceeeEEEEEeCCHHHHHHHHHHhcCCEEeeecCc------eEEEEeccccccceEeeccC-------CCCceeEEEEEe
Confidence            67899999999999999999999999998765321      23333211111222333221       124689999999


Q ss_pred             C---CHHHHHHHHHHcCCeeecCCeecCCCceEEEEEECCCCCEEEEEeCCCC---------------------CCCceE
Q 022818          101 E---DVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRGPT---------------------PEPLCQ  156 (291)
Q Consensus       101 ~---d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~Dp~G~~iel~~~~~~---------------------~~~~~~  156 (291)
                      +   |+++++++|+++|+++...+.....+....++|+||+|+.|||++....                     ..+++|
T Consensus        69 ~~~~dl~~~~~~l~~~G~~~~~~~~~~~~~~g~~~~~~DPdG~~iEl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~H  148 (303)
T TIGR03211        69 ESEADLERLVKRLEAYGVGTGWIPAGELPGVGRRVRFTLPSGHTMELYAEKEYVGELVGGLNPDPWPDPLRGVGARRLDH  148 (303)
T ss_pred             CCHHHHHHHHHHHHHcCCCeeeccCCCCCCcceEEEEECCCCCEEEEEEccccccccccccCCcccccccCCcCceeEEE
Confidence            7   7899999999999998765542222222348999999999999985431                     235899


Q ss_pred             EEeeeCChhhhHHHHHHhcCCeeeeeeccCCccc-eEEEeccccCCceeEEEEeeecCcceeecCcc-eeEEEEEecchH
Q 022818          157 VMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKY-TLAMLGYAEEDQTTVLELTYNYGVTEYTKGNA-YAQVAISTDDVY  234 (291)
Q Consensus       157 v~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~-~~hi~~~v~di~  234 (291)
                      |+|.|+|++++.+||+++|||++......+++.. ...++.....  ...+.+..       ..+.+ +.|+||.|+|++
T Consensus       149 i~l~V~Dl~~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~-------~~~~g~~~Hiaf~v~~~~  219 (303)
T TIGR03211       149 CLLYGEDVAENTRFFTEVLGFRLTEQVVLGDGKEQAAAWLSVSNK--AHDIAFVG-------DPEPGKLHHVSFFLDSWE  219 (303)
T ss_pred             EeEEeCCHHHHHHHHHHhcCCEEEeeEEcCCCcEEEEEEEEcCCC--Ccccceec-------CCCCCceEEEEEEcCCHH
Confidence            9999999999999999999999876654333321 2333432221  22222211       01234 889999999744


Q ss_pred             H---hHHHHHHHHHHhCCeeecCCccCCCCCceEEEEECCCCceEEEe
Q 022818          235 K---SAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLV  279 (291)
Q Consensus       235 ~---~~~~l~~~~~~~G~~~~~~~~~~~~~~~~~~~~~DpdG~~iel~  279 (291)
                      +   +.++|    +++|+++..+|...+....+++||+||+||+|||+
T Consensus       220 ~v~~~~~~l----~~~G~~~~~~p~~~~~~~~~~~y~~DPdG~~iEl~  263 (303)
T TIGR03211       220 DVLKAADVM----SKNDVSIDIGPTRHGITRGQTIYFFDPSGNRNETF  263 (303)
T ss_pred             HHHHHHHHH----HhCCCceeeCCcccCCCCceEEEEECCCCCEEEEe
Confidence            3   44556    99999988887765533357899999999999998

Members of this family all are enzymes active as catechol 2,3 dioxygenase (1.13.11.2), although some members have highly significant activity on catechol derivatives such as 3-methylcatechol, 3-chlorocatechol, and 4-chlorocatechol (see Mars, et al.). This enzyme is also called metapyrocatechase, as it performs a meta-cleavage (an extradiol ring cleavage), in contrast to the ortho-cleavage (intradiol ring cleavage)performed by catechol 1,2-dioxygenase (EC 1.13.11.1), also called pyrocatechase.

>TIGR02295 HpaD 3,4-dihydroxyphenylacetate 2,3-dioxygenase

Probab=100.00  E-value=9.8e-32  Score=228.13  Aligned_cols=237  Identities=23%  Similarity=0.276  Sum_probs=163.6

Q ss_pred             cceeeEEEEEEeCCHHHHHHHHHhhcCCEEEEEeecCCCceeEEEEecCCCCcceEEEeeecCCCCcccCCCCceEEEEE
Q 022818           20 DKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIA   99 (291)
Q Consensus        20 ~~~~i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~~~~i~~~   99 (291)
                      +|.+|+|+.|.|+|++++++||+++|||++..+..  .    ..++..........+.+...       ...+..|++|.
T Consensus         1 ~i~~i~hv~l~v~Dl~~s~~FY~~vLGl~~~~~~~--~----~~~~~~~~~~~~~~l~l~~~-------~~~~~~hiaf~   67 (294)
T TIGR02295         1 NILRTGHVELRVTDLDKSREFYVDLLGFRETESDK--E----YIYLRGIEEFQHHSLVLTKA-------PSAALSYIGFR   67 (294)
T ss_pred             CCceeeEEEEEeCCHHHHHHHHHHccCCEEEEecC--C----eEEEeccCcCCceEEEeeeC-------CCcCccEEEEE
Confidence            47899999999999999999999999999876532  1    23343211111222323221       12468899999


Q ss_pred             eC---CHHHHHHHHHHcCCeeecCCeecCCCceEEEEEECCCCCEEEEEeCCC---------------CCCCceEEEeee
Q 022818          100 TE---DVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRGP---------------TPEPLCQVMLRV  161 (291)
Q Consensus       100 v~---d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~Dp~G~~iel~~~~~---------------~~~~~~~v~l~v  161 (291)
                      |+   |+++++++|+++|+++...+.  +++. +.+||+||+||.|||+....               .+.++.|++|.|
T Consensus        68 v~~~~dl~~~~~~l~~~Gv~v~~~~~--~~~~-~~~~~~DPdG~~iEl~~~~~~~~~~~~~~~~~~~~~~~~i~Hv~l~v  144 (294)
T TIGR02295        68 VSKEEDLDKAADFFQKLGHPVRLVRD--GGQP-EALRVEDPFGYPIEFYFEMEKVERLLRRYHRHRGVSPVRLDHFNVFV  144 (294)
T ss_pred             eCCHHHHHHHHHHHHhcCCcEEeecC--CCCc-eEEEEECCCCCEEEEEEchhhcccccccccccCCccceeeeeEEEEe
Confidence            96   789999999999998776432  2222 45899999999999987431               134689999999


Q ss_pred             CChhhhHHHHHHhcCCeeeeeeccCCccceEEEeccccCCceeEEEEeeecCcceeecCcceeEEEEEecchHHhHHHHH
Q 022818          162 GDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDVYKSAEVVN  241 (291)
Q Consensus       162 ~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~hi~~~v~di~~~~~~l~  241 (291)
                      +|++++.+||+++|||++......+.+.....++.....  ...+.+..       ..++++.|+||.|+|.++. .++.
T Consensus       145 ~dl~~a~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~-------~~~~~~~Hiaf~v~d~~~v-~~~~  214 (294)
T TIGR02295       145 PDVQRALRFYKEELGFRVTEYTEDDEGNLAAAWLHRKGG--VHDIALTN-------GNGPRLHHIAYWVHDPLNI-IKAC  214 (294)
T ss_pred             CCHHHHHHHHHHhcCCEEEEEeccCCCcEEEEEEecCCC--cCceEeec-------CCCCceeeEEEEcCCHHHH-HHHH
Confidence            999999999999999998765433333323344432211  22333321       1246789999999994433 2333


Q ss_pred             HHHHHhCCe--eecCCccCCCCCceEEEEECCCCceEEEeech
Q 022818          242 LVTQELGGK--ITRQPGSIPGLNTKITSFVDPDGWKTVLVDNE  282 (291)
Q Consensus       242 ~~~~~~G~~--~~~~~~~~~~~~~~~~~~~DpdG~~iel~~~~  282 (291)
                      ++|+++|++  +...|..+...+..++|++||+||+|||+...
T Consensus       215 ~~l~~~G~~~~~~~~p~~~~~~~~~~~y~~DP~G~~iEl~~~~  257 (294)
T TIGR02295       215 DILASAGLSDSIERGPGRHGVSNAFFLYLRDPDGHRIELYTGD  257 (294)
T ss_pred             HHHHhCCCCcccccCCccCCCCcceEEEEECCCCCEEEEEecc
Confidence            444999997  65566654433347799999999999998754

The enzyme from Bacillus brevis contains manganese.

>KOG2943 consensus Predicted glyoxalase [Carbohydrate transport and metabolism]

Probab=100.00  E-value=4e-32  Score=208.71  Aligned_cols=258  Identities=50%  Similarity=0.862  Sum_probs=216.1

Q ss_pred             cCCCCCcceeeEEEEEEeCCHHHHHHHHHhhcCCEEEEEeecCC-----------CceeEEEEecCCCCcceEEEeeecC
Q 022818           14 LEWPKKDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPE-----------EKYSNAFLGFGPEQSHFVVELTYNY   82 (291)
Q Consensus        14 ~~~~~~~~~~i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~l~~~~~~   82 (291)
                      ..+++.+-.+.-|+++.|-|..+++.||+++|||.+....++++           ++|.-.++++|+...+|+++++.++
T Consensus         8 ~~~~~~~~~r~LH~VfkVgdr~kti~Fyt~vlgMkvLRheef~egc~aacngpyd~kwSktmvGyGpEdshFViELTYNY   87 (299)
T KOG2943|consen    8 LCWMKADTRRALHYVFKVGDRAKTIDFYTEVLGMKVLRHEEFEEGCEAACNGPYDGKWSKTMVGYGPEDSHFVIELTYNY   87 (299)
T ss_pred             hhhhhccchheeeEeEeecchHHHHHHHHHhhcceeeehhhhhhhhhhhcCCCcccchhhhheecCCCcccEEEEEEecc
Confidence            35666777889999999999999999999999999998888877           6788889999999999999999999


Q ss_pred             CCCcccCCCCceEEEEEeCCHHHHHHHHHHcCCeeecCCeecCCCceEEEEEECCCCCEEEEEeCCCCCCCceEEEeeeC
Q 022818           83 GVTSYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRGPTPEPLCQVMLRVG  162 (291)
Q Consensus        83 ~~~~~~~g~~~~~i~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~Dp~G~~iel~~~~~~~~~~~~v~l~v~  162 (291)
                      +++.+..|.++.|+.+.++|+-...+.+...|.+        ..|.. .+++.||||+.+++++..+.+.++..|.|+|.
T Consensus        88 gV~~YelGndfg~i~I~s~dv~~~ve~v~~p~~~--------~~g~~-~~~v~dPdGykF~l~~~~p~s~pv~~V~l~Vg  158 (299)
T KOG2943|consen   88 GVSKYELGNDFGGITIASDDVFSKVEKVNAPGGK--------GSGCG-IAFVKDPDGYKFYLIDRGPQSDPVLQVMLNVG  158 (299)
T ss_pred             CccceeccCCcccEEEeHHHHHHHHHHhcCcCCc--------ccceE-EEEEECCCCcEEEEeccCCCCCCeEEEEEEeh
Confidence            9999999999999999999987777776665532        12333 37889999999999998899999999999999


Q ss_pred             ChhhhHHHHHHhcCCeeeeeeccCCccceEEEeccccCCceeEEEEeeecCcceeecCcceeEEEEEecchHHhHHHHHH
Q 022818          163 DLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDVYKSAEVVNL  242 (291)
Q Consensus       163 d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~hi~~~v~di~~~~~~l~~  242 (291)
                      |+++++.||.+.||+++.+.    +..++.++++++.+  ...||++++.+...+..+.+...+++..+++..+.+.+  
T Consensus       159 dL~ks~kyw~~~lgM~ilek----eek~t~~~mgYgd~--q~~LElt~~~~~id~~kg~griafaip~d~~~~l~e~i--  230 (299)
T KOG2943|consen  159 DLQKSIKYWEKLLGMKILEK----EEKYTRARMGYGDE--QCVLELTYNYDVIDRAKGFGRIAFAIPTDDLPKLQEAI--  230 (299)
T ss_pred             hHHHHHHHHHHHhCcchhhh----hhhhhhhhhccCCc--ceEEEEEeccCcccccccceeEEEeccccccccHHHHH--
Confidence            99999999999999998763    33467778888776  68999999998887777777777777788999999999  


Q ss_pred             HHHHhCCeeecCCcc--CCCCC-ceEEEEECCCCceEEEeechhhhhhhhc
Q 022818          243 VTQELGGKITRQPGS--IPGLN-TKITSFVDPDGWKTVLVDNEDFLKELQS  290 (291)
Q Consensus       243 ~~~~~G~~~~~~~~~--~~~~~-~~~~~~~DpdG~~iel~~~~~~~~~~~~  290 (291)
                        +..+.++..+...  .|+.. ..++-+.||||+.|+|+..+++.+...+
T Consensus       231 --K~~n~~i~~~lttl~tPgka~vqvvil~DPDgheicfVdde~F~~lsk~  279 (299)
T KOG2943|consen  231 --KSANGTILTPLTTLDTPGKATVQVVILADPDGHEICFVDDEGFRKLSKI  279 (299)
T ss_pred             --HHhccccccceeeccCCCcceeEEEEEECCCCceEEEeccHHHHHHhcc
Confidence              7777776666544  33322 3567789999999999999998876654

>TIGR03213 23dbph12diox 2,3-dihydroxybiphenyl 1,2-dioxygenase

Probab=100.00  E-value=1.9e-30  Score=219.20  Aligned_cols=234  Identities=18%  Similarity=0.237  Sum_probs=163.4

Q ss_pred             ceeeEEEEEEeCCHHHHHHHHHhhcCCEEEEEeecCCCceeEEEEecCCCCcceEEEeeecCCCCcccCCCCceEEEEEe
Q 022818           21 KRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIAT  100 (291)
Q Consensus        21 ~~~i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~~~~i~~~v  100 (291)
                      |.+|.|+.|.|+|+++|.+||+++|||+...+..  ++   ..++..+...  ..+.+....       ..+..|++|.|
T Consensus         1 ~~~i~~v~l~V~Dl~~s~~FY~~~LGl~~~~~~~--~~---~~~~~~~~~~--~~~~l~~~~-------~~~~~~~~f~V   66 (286)
T TIGR03213         1 VRGLGYLGIGVSDVDAWREFATEVLGMMVASEGE--ND---ALYLRLDSRA--HRIAVHPGE-------SDDLAYAGWEV   66 (286)
T ss_pred             CceeeEEEEEeCCHHHHHHHHHhccCcccccCCC--Cc---eEEEEcCCCc--eEEEEEECC-------cCCeeeEeeee
Confidence            5789999999999999999999999999754321  11   2344554322  223232221       12577899999


Q ss_pred             CC---HHHHHHHHHHcCCeeecCCeec--CCCceEEEEEECCCCCEEEEEeCCCC------------------CCCceEE
Q 022818          101 ED---VYKLVENIRAKGGNVTREPGPL--KGGTTHIAFVKDPDGYIFELIQRGPT------------------PEPLCQV  157 (291)
Q Consensus       101 ~d---~~~~~~~l~~~G~~~~~~~~~~--~~g~~~~~~~~Dp~G~~iel~~~~~~------------------~~~~~~v  157 (291)
                      ++   ++++.++|+++|+++...+...  ..+....++|.||+||.+|+......                  +.++.||
T Consensus        67 ~~~~~l~~~~~~L~~~Gv~~~~~~~~~~~~~~~~~~~~f~DPdGn~lEl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Hv  146 (286)
T TIGR03213        67 ADEAGLDQVKEKLEKAGVAVTVASAAEARERGVLGLIKFTDPGGNPLEIYYGAVEDFEKPFVSPRAVSGFVTGDQGLGHI  146 (286)
T ss_pred             CCHHHHHHHHHHHHHcCCceEECCHHHhhhccceEEEEEECCCCCEEEEEEcccccCCCCCCCCCCCCccccCCccccEE
Confidence            88   8899999999999887654321  12333458999999999999874311                  1268899


Q ss_pred             EeeeCChhhhHHHHHHhcCCeeeeeeccCC--c-cceEEEeccccCCceeEEEEeeecCcceeecCcceeEEEEEecchH
Q 022818          158 MLRVGDLGRSIKFYEKALGMKLLRTVDKPE--Y-KYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDVY  234 (291)
Q Consensus       158 ~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~--~-~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~hi~~~v~di~  234 (291)
                      .|.|+|++++.+||+++|||++......+.  + .+...++.....  +..+.+.. .     +..+++.|++|.|+|++
T Consensus       147 ~l~v~Dle~s~~FY~~~LGf~~~~~~~~~~~~g~~~~~~~l~~~~~--~~~~~l~~-~-----~~~~~~~Hiaf~v~d~~  218 (286)
T TIGR03213       147 VLRVPDVDAALAFYTEVLGFQLSDVIDLPAGPGVTVRPYFLHCNER--HHSLAFAA-G-----PSEKRLNHLMLEVDTLD  218 (286)
T ss_pred             EEEcCCHHHHHHHHHHccCCeEEEeEcccCCCCCcceEEEEEECCC--cceEEEec-C-----CCCCceEEEEEEcCCHH
Confidence            999999999999999999999876543221  1 122444543322  33344321 1     12457899999999866


Q ss_pred             H---hHHHHHHHHHHhCCeeecCCccCCCCCceEEEEECCCCceEEEeec
Q 022818          235 K---SAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDN  281 (291)
Q Consensus       235 ~---~~~~l~~~~~~~G~~~~~~~~~~~~~~~~~~~~~DpdG~~iel~~~  281 (291)
                      +   +.++|    +++|+ ....|.+++.++.+++|++||+|++|||...
T Consensus       219 ~v~~~~~~l----~~~G~-~~~~~~r~~~~~~~~~y~~DP~G~~iE~~~~  263 (286)
T TIGR03213       219 DVGLALDRV----DADGI-VASTLGRHTNDHMVSFYVATPSGWLVEYGWG  263 (286)
T ss_pred             HHHHHHHHH----HHCCC-EEecCCcCCCCCeEEEEEECCCCcEEEeecC
Confidence            5   56666    99999 5556666554456889999999999999763

Members of this protein family all have activity as 2,3-dihydroxybiphenyl 1,2-dioxygenase, the third enzyme of a pathway for biphenyl degradation. Many of the extradiol ring-cleaving dioxygenases, to which these proteins belong, act on a range of related substrates. Note that some members of this family may be found operons for toluene or naphthalene degradation, where other activities of the same enzyme may be more significant; the trusted cutoff for this model is set relatively high to exclude most such instances.

>TIGR01263 4HPPD 4-hydroxyphenylpyruvate dioxygenase

Probab=99.92  E-value=6.8e-23  Score=177.45  Aligned_cols=222  Identities=22%  Similarity=0.371  Sum_probs=148.7

Q ss_pred             eeeEEEEEEeCCHHHHHHHHHhhcCCEEEEEeecCCCceeEEEEecCCCCcceEEEeeecCCCC----cc--cCCCCceE
Q 022818           22 RRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVT----SY--DIGTGFGH   95 (291)
Q Consensus        22 ~~i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~----~~--~~g~~~~~   95 (291)
                      ++++|+.|.|+|++++.+||++.|||+........... ..+.+..+  ...+.+  ..+....    .+  .+|++++|
T Consensus         1 ~~i~hi~~~V~D~~~a~~~y~~~LGf~~~~~~~~~~~~-~~~~~~~G--~~~l~L--~~~~~~~s~~~~~~~~hg~gv~~   75 (353)
T TIGR01263         1 DGFDFVEFYVGDAKQAAYYYFTRFGFEKVAKETGHREK-ASHVLRQG--QINFVL--TAPYSSDSPAADFAAKHGDGVKD   75 (353)
T ss_pred             CceEEEEEEeCCHHHHHHHHHHhcCCcEEEEeecCCce-eEEEEEeC--CEEEEE--ecCCCCCchHHHHHHhCCCceEE
Confidence            46899999999999999999999999998763222221 22334433  333333  3322111    11  26789999


Q ss_pred             EEEEeCCHHHHHHHHHHcCCeeecCCeecCCCceEEEEEECCCCCEEEEEeCCC----------------------C---
Q 022818           96 FAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRGP----------------------T---  150 (291)
Q Consensus        96 i~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~Dp~G~~iel~~~~~----------------------~---  150 (291)
                      +||.|+|++++++++.++|+++..+|.....|...+.-+..+.|..+.|++...                      .   
T Consensus        76 iaf~V~Dv~~a~~~l~~~Ga~~v~~p~~~~~g~~~~~~i~~~g~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  155 (353)
T TIGR01263        76 VAFRVDDAAAAFEAAVERGAEPVQAPVELDEGAVTLATIKGIGDVVHTLVDRGGYKGSFYPGFFESLLDAALHEPPPGVG  155 (353)
T ss_pred             EEEEECCHHHHHHHHHHCCCEeccCCccCCCCeEEEEEEECcCCCEEEEEcCCCCCCCCCCCccccccccccccCCCCCC
Confidence            999999999999999999999887765431122222223444444444443210                      0   


Q ss_pred             CCCceEEEeeeC--ChhhhHHHHHHhcCCeeeeeeccCCc--cc-eEEEeccccCCceeEEEEeeecCc---c------e
Q 022818          151 PEPLCQVMLRVG--DLGRSIKFYEKALGMKLLRTVDKPEY--KY-TLAMLGYAEEDQTTVLELTYNYGV---T------E  216 (291)
Q Consensus       151 ~~~~~~v~l~v~--d~~~~~~fy~~~lG~~~~~~~~~~~~--~~-~~~~~~~~~~~~~~~l~l~~~~~~---~------~  216 (291)
                      ..+++|+++.|.  |+++++.||+++|||++....+....  .. +.++.. +.  ....|++..+...   .      .
T Consensus       156 ~~~iDHv~i~V~~~dl~~~~~fY~~~lGf~~~~~~~~~~~~~~~~s~~~~~-~~--g~~~i~L~ep~~~~~~s~i~~fl~  232 (353)
T TIGR01263       156 LIAIDHLVGNVYRGQMEPWAEFYEKIFGFREIRSFDIKTEYSALNSIVMAS-PD--GKVKIPLNEPASGKDKSQIEEFLE  232 (353)
T ss_pred             eEEeeeeEcccCCccHHHHHHHHHHHhCCceeeEEEeccCCccEEEEEEEC-CC--CcEEEEEeccCCCCCCCHHHHHHH
Confidence            124999999999  99999999999999998766543221  11 222222 12  2466777553211   1      1


Q ss_pred             eecCcceeEEEEEecchHHhHHHHHHHHHHhCCeeecCC
Q 022818          217 YTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQP  255 (291)
Q Consensus       217 ~~~~~~~~hi~~~v~di~~~~~~l~~~~~~~G~~~~~~~  255 (291)
                      ...|+|++||||.|+|+++++++|    +++|++++..|
T Consensus       233 ~~~g~Gv~HiAf~vdDi~~~~~~l----~~~Gv~~l~~P  267 (353)
T TIGR01263       233 FYNGAGVQHIALNTDDIVRTVRAL----RARGVEFLDTP  267 (353)
T ss_pred             HcCCCCccEEEEEcCCHHHHHHHH----HHcCCccCcCC
Confidence            224789999999999999999999    99999998877

This protein oxidizes 4-hydroxyphenylpyruvate, a tyrosine and phenylalanine catabolite, to homogentisate. Homogentisate can undergo a further non-enzymatic oxidation and polymerization into brown pigments that protect some bacterial species from light. A similar process occurs spontaneously in blood and is hemolytic (see PubMed:8000039). In some bacterial species, this enzyme has been studied as a hemolysin.

>PLN02875 4-hydroxyphenylpyruvate dioxygenase

Probab=99.88  E-value=7.7e-21  Score=163.16  Aligned_cols=224  Identities=18%  Similarity=0.263  Sum_probs=159.0

Q ss_pred             eEEEEEEeCCHHHHHHHHHhhcCCEEEEEeecCCC--ceeEEEEecCCCCcceEEEeeecCC------------------
Q 022818           24 FLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEE--KYSNAFLGFGPEQSHFVVELTYNYG------------------   83 (291)
Q Consensus        24 i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~~~~~~~------------------   83 (291)
                      |+||.+.|.|.+++..||+..|||+.+.+.....+  ......++  ++.+.|++.-.-...                  
T Consensus         1 ~dhvef~v~da~~~~~~f~~~~GF~~~a~~~~~tg~~~~~s~~~r--~g~i~fv~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (398)
T PLN02875          1 FHHVEFWCGDATNTARRFSWGLGMPLVAKSDLTTGNTTYASYLLR--SGDLVFLFTAPYSPKIGAGDDDPASTAPHPSFS   78 (398)
T ss_pred             CeEEEEEcCCHHHHHHHHHHhcCCCeEeecCCCCCCcceEEEEEE--eCCEEEEEeCCCCCccccccccccccccccccC
Confidence            68999999999999999999999999886653222  22333444  445666554332110                  


Q ss_pred             C---Ccc--cCCCCceEEEEEeCCHHHHHHHHHHcCCeeecCCeecC----CCceEEEEEECCCCCEEEEEeCCC-----
Q 022818           84 V---TSY--DIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLK----GGTTHIAFVKDPDGYIFELIQRGP-----  149 (291)
Q Consensus        84 ~---~~~--~~g~~~~~i~~~v~d~~~~~~~l~~~G~~~~~~~~~~~----~g~~~~~~~~Dp~G~~iel~~~~~-----  149 (291)
                      .   ..+  .+|++++.|+|+|+|++++++++.++|++...+|....    .|...+.-+..+.|.++.|++...     
T Consensus        79 ~~~a~~~~~~HG~gV~dvaf~V~Da~~a~~~A~~~Ga~~~~~~~~~~d~~~~g~~~~~~I~~~G~~~h~lVdr~~~~~~~  158 (398)
T PLN02875         79 SDAARRFFAKHGLAVRAVGVLVEDAEEAFRTSVAHGARPVLEPTELGDEASGGKAVIAEVELYGDVVLRYVSYKGFDGAK  158 (398)
T ss_pred             cHHHHHHHHHcCCeeeEEEEEECCHHHHHHHHHHCCCeeccCCccccccccCceEEEEEEEccCCcEEEEEccCCCCCCc
Confidence            0   011  26889999999999999999999999999887766542    223334556777777777776421     


Q ss_pred             ----------C--------CCCceEEEeeeCChhhhHHHHHHhcCCeeeeeeccCCc-----cceEEEeccccCCceeEE
Q 022818          150 ----------T--------PEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEY-----KYTLAMLGYAEEDQTTVL  206 (291)
Q Consensus       150 ----------~--------~~~~~~v~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~l  206 (291)
                                .        ..+|+||++.|++++.++.||+++|||+..+..+.++.     +.+...+..+.  ....+
T Consensus       159 f~p~f~~~~~~~~~~~~~gl~~IDHi~iaV~~ld~a~~fY~~vlGf~~~~~~d~~~i~~~~sgl~S~vl~sp~--g~v~i  236 (398)
T PLN02875        159 FLPGYEPVESSSSFPLDYGLRRLDHAVGNVPNLLPAVNYIAGFTGFHEFAEFTAEDVGTVDSGLNSMVLASNN--EMVLL  236 (398)
T ss_pred             cCCCcccccccccCCCCCCcceeCcceechhhHHHHHHHHHHhcCCeeeeeeccccccccccceEEEEEEcCC--CcEEE
Confidence                      0        12599999999999999999999999998865544322     22444454333  24566


Q ss_pred             EEeeecC----cce------eecCcceeEEEEEecchHHhHHHHHHHHHHh----CCeeecCC
Q 022818          207 ELTYNYG----VTE------YTKGNAYAQVAISTDDVYKSAEVVNLVTQEL----GGKITRQP  255 (291)
Q Consensus       207 ~l~~~~~----~~~------~~~~~~~~hi~~~v~di~~~~~~l~~~~~~~----G~~~~~~~  255 (291)
                      +|..+..    .++      ...|+|++||||.|+||.+++++|    +++    |++++..|
T Consensus       237 pLnEP~~~~~~~SqI~eFL~~~~G~GIQHIAl~tdDI~~av~~L----ra~~~~~Gv~fL~~P  295 (398)
T PLN02875        237 PLNEPTFGTKRKSQIQTYLEHNEGPGLQHLALKSDDIFGTLREM----RARSHIGGFEFMPPP  295 (398)
T ss_pred             EeccCCCCCCCcChHHHHHHhcCCCCeeEEEeecCCHHHHHHHH----HhccccCCeecCCCC
Confidence            6655432    111      235789999999999999999999    888    99999865

>TIGR00068 glyox_I lactoylglutathione lyase

Probab=99.87  E-value=3.1e-20  Score=141.79  Aligned_cols=139  Identities=64%  Similarity=1.075  Sum_probs=106.8

Q ss_pred             cccCCCCCcceeeEEEEEEeCCHHHHHHHHHhhcCCEEEEEeecCCCceeEEEEecCCCCcceEEEeeecCCCCcccCCC
Q 022818           12 ELLEWPKKDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGT   91 (291)
Q Consensus        12 ~~~~~~~~~~~~i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~   91 (291)
                      .....|+...++|+|+.|.|+|++++.+||+++|||++..+...+...+..+++..++......+++.......+...+.
T Consensus         6 ~~~~~~~~~~~~i~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~   85 (150)
T TIGR00068         6 DLVADPKTKKRRLLHTMLRVGDLDKSLDFYTEVLGMKLLRKRDFPEMKFSLAFLGYGDETSAAVIELTHNWGTEKYDLGN   85 (150)
T ss_pred             ccccCcccCCceEEEEEEEecCHHHHHHHHHHhcCCEEEEEeccCCCceEEEEecCCCCCCccEEEEeecCCCCcccCCC
Confidence            34567788899999999999999999999999999998776555554445566665443334455554433323333455


Q ss_pred             CceEEEEEeCCHHHHHHHHHHcCCeeecCCeecCCCceEEEEEECCCCCEEEEEeCCCC
Q 022818           92 GFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRGPT  150 (291)
Q Consensus        92 ~~~~i~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~Dp~G~~iel~~~~~~  150 (291)
                      +..|++|.|+|+++++++|.++|+++..+|...+++..+.+||+||+|+.|||++....
T Consensus        86 g~~hi~f~v~dld~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~~~~  144 (150)
T TIGR00068        86 GFGHIAIGVDDVYKACERVRALGGNVVREPGPVKGGTTVIAFVEDPDGYKIELIQRKST  144 (150)
T ss_pred             ceeEEEEecCCHHHHHHHHHHcCCccccCCcccCCCceEEEEEECCCCCEEEEEECCch
Confidence            78999999999999999999999998877766666655568899999999999987654

Glyoxylase I is a homodimer in many species. In some eukaryotes, including yeasts and plants, the orthologous protein carries a tandem duplication, is twice as long, and hits this model twice.

>TIGR00068 glyox_I lactoylglutathione lyase

Probab=99.86  E-value=9.3e-21  Score=144.69  Aligned_cols=137  Identities=45%  Similarity=0.789  Sum_probs=105.1

Q ss_pred             CCCCCceEEEeeeCChhhhHHHHHHhcCCeeeeeeccCCccceEEEeccccCCceeEEEEeeecCcceeecCcceeEEEE
Q 022818          149 PTPEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAI  228 (291)
Q Consensus       149 ~~~~~~~~v~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~hi~~  228 (291)
                      ....++.|+.|.|.|++++.+||+++|||++......++.++.+++++.+.......+++..+.+..+...+.+..|++|
T Consensus        13 ~~~~~i~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~g~~hi~f   92 (150)
T TIGR00068        13 TKKRRLLHTMLRVGDLDKSLDFYTEVLGMKLLRKRDFPEMKFSLAFLGYGDETSAAVIELTHNWGTEKYDLGNGFGHIAI   92 (150)
T ss_pred             cCCceEEEEEEEecCHHHHHHHHHHhcCCEEEEEeccCCCceEEEEecCCCCCCccEEEEeecCCCCcccCCCceeEEEE
Confidence            34568999999999999999999999999987655444444556666543332344566544333222234457899999


Q ss_pred             EecchHHhHHHHHHHHHHhCCeeecCCccCCCCCceEEEEECCCCceEEEeechhhhhhhh
Q 022818          229 STDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNEDFLKELQ  289 (291)
Q Consensus       229 ~v~di~~~~~~l~~~~~~~G~~~~~~~~~~~~~~~~~~~~~DpdG~~iel~~~~~~~~~~~  289 (291)
                      .|+|+++++++|    +++|+++..+|...+....+.+||+||+||+|||++....++.||
T Consensus        93 ~v~dld~~~~~l----~~~G~~~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~~~~~~~~~  149 (150)
T TIGR00068        93 GVDDVYKACERV----RALGGNVVREPGPVKGGTTVIAFVEDPDGYKIELIQRKSTKDGLG  149 (150)
T ss_pred             ecCCHHHHHHHH----HHcCCccccCCcccCCCceEEEEEECCCCCEEEEEECCchhhhcc
Confidence            999999999999    999999988876555544578899999999999999999888887

Glyoxylase I is a homodimer in many species. In some eukaryotes, including yeasts and plants, the orthologous protein carries a tandem duplication, is twice as long, and hits this model twice.

>PLN02367 lactoylglutathione lyase

Probab=99.86  E-value=1.2e-20  Score=149.93  Aligned_cols=130  Identities=34%  Similarity=0.605  Sum_probs=106.6

Q ss_pred             CCceEEEeeeCChhhhHHHHHHhcCCeeeeeeccCCccceEEEeccccCC---------------ceeEEEEeeecCcce
Q 022818          152 EPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEED---------------QTTVLELTYNYGVTE  216 (291)
Q Consensus       152 ~~~~~v~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~l~l~~~~~~~~  216 (291)
                      ..+.|+.|.|.|++++++||+++|||++..+.+.+++++++++++++...               ....|||+.+.+...
T Consensus        74 ~~~~HtmlRVkDle~Sl~FYt~vLGm~ll~r~d~pe~~f~lyFL~~~~~~~~p~d~~~r~~~~~~~~~~LELt~n~g~e~  153 (233)
T PLN02367         74 YIMQQTMYRIKDPKASLDFYSRVLGMSLLKRLDFPEMKFSLYFMGYEDTASAPTDPTERTVWTFGQKATIELTHNWGTES  153 (233)
T ss_pred             cEEEEEEEEeCCHHHHHHHHHHhcCCEEeEEEecCCCcEEEEEeecCCccccccccccceeeccCCCCEEEEecCCCCCc
Confidence            46899999999999999999999999999988888888999998753311               135789987765431


Q ss_pred             ------eecC----cceeEEEEEecchHHhHHHHHHHHHHhCCeeecCCccCCCCCceEEEEECCCCceEEEeechhhhh
Q 022818          217 ------YTKG----NAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNEDFLK  286 (291)
Q Consensus       217 ------~~~~----~~~~hi~~~v~di~~~~~~l~~~~~~~G~~~~~~~~~~~~~~~~~~~~~DpdG~~iel~~~~~~~~  286 (291)
                            +..+    .|+.||+|.|+|+++++++|    +++|+++...|...++  .+++|++|||||+|||+|.....+
T Consensus       154 ~~~~~~y~~gn~~p~G~~HIaf~VdDVdaa~erL----~a~Gv~~v~~P~~g~~--~riaFIkDPDGn~IEL~e~~~~~~  227 (233)
T PLN02367        154 DPDFKGYHNGNSEPRGFGHIGITVDDVYKACERF----EELGVEFVKKPNDGKM--KGIAFIKDPDGYWIEIFDLKTIGT  227 (233)
T ss_pred             cccchhcccCCCCCCCceEEEEEcCCHHHHHHHH----HHCCCEEEeCCccCCc--eEEEEEECCCCCEEEEEecccccc
Confidence                  3333    48999999999999999999    9999999988775443  478999999999999999887654


Q ss_pred             h
Q 022818          287 E  287 (291)
Q Consensus       287 ~  287 (291)
                      -
T Consensus       228 ~  228 (233)
T PLN02367        228 T  228 (233)
T ss_pred             c
Confidence            3

>COG2514 Predicted ring-cleavage extradiol dioxygenase [General function prediction only]

Probab=99.86  E-value=3e-19  Score=142.05  Aligned_cols=194  Identities=21%  Similarity=0.301  Sum_probs=133.0

Q ss_pred             CcceeeEEEEEEeCCHHHHHHHHHhhcCCEEEEEeecCCCceeEEEEecCCCCcceEEEeeecCCC-CcccCCCCceEEE
Q 022818           19 KDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGV-TSYDIGTGFGHFA   97 (291)
Q Consensus        19 ~~~~~i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~~~~~g~~~~~i~   97 (291)
                      +.-+.+..+.|.|+|++.+..||+++||+++..+..      ....+.+++.   -.+.+.+.... .+.....|+.|++
T Consensus         6 ~~~~~v~~v~L~vrdL~~~~~FY~~ilGL~v~~~~~------~~v~L~vgg~---~LL~L~q~~~a~~~~~~~aGLyH~A   76 (265)
T COG2514           6 TTPTFVGAVTLNVRDLDSMTSFYQEILGLQVLEETD------GSVTLGVGGT---PLLTLEQFPDARRPPPRAAGLYHTA   76 (265)
T ss_pred             CCCcEEEEEEEEeccHHHHHHHHHHhhCCeeeeccC------ceEEEeeCCE---EEEEEEeCCCCCCCCccccceeeee
Confidence            345788999999999999999999999999987754      2456666543   23444443322 2223566999999


Q ss_pred             EEeCC---HHHHHHHHHHcCCeeecCCeecCCCceEEEEEECCCCCEEEEEeCCCC------------------------
Q 022818           98 IATED---VYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRGPT------------------------  150 (291)
Q Consensus        98 ~~v~d---~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~Dp~G~~iel~~~~~~------------------------  150 (291)
                      |.+++   +.++..++.+.|+.+... .  +.....-+||.||+||-||+....+.                        
T Consensus        77 fLlP~r~~L~~~l~hl~~~~~~l~Ga-~--DH~vSEAlYl~DPEGNGIEiYaDrp~~~W~~~~~~v~m~t~~ld~~~ll~  153 (265)
T COG2514          77 FLLPTREDLARVLNHLAEEGIPLVGA-S--DHLVSEALYLEDPEGNGIEIYADRPRSTWDWQNDQVKMDTEPLDVEALLE  153 (265)
T ss_pred             eecCCHHHHHHHHHHHHhcCCccccc-C--cchhheeeeecCCCCCeEEEEecCChHHhcccCCeeeecccccCHHHHhh
Confidence            99975   778888999999876522 1  11222349999999999999987532                        


Q ss_pred             ------------CCCceEEEeeeCChhhhHHHHHHhcCCeeeeeeccCCccceEEEeccccCCceeEEEEe-eecCccee
Q 022818          151 ------------PEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELT-YNYGVTEY  217 (291)
Q Consensus       151 ------------~~~~~~v~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~-~~~~~~~~  217 (291)
                                  ...|.||.|.|.|++++.+||+++|||......+      ...|++.+.-  +..+... ++......
T Consensus       154 ~~~~~~~~g~p~~t~IGHvHL~v~~l~eA~~fY~~~LG~~~~~~~~------~A~F~a~G~Y--HHHia~N~W~s~~~~~  225 (265)
T COG2514         154 EATKEPWTGLPAGTIIGHVHLKVADLEEAEQFYEDVLGLEVTARGP------SALFLASGDY--HHHLAANTWNSRGARP  225 (265)
T ss_pred             hccccccccCCCCcEEeEEEEEeCCHHHHHHHHHHhcCCeeeecCC------cceEEecCCc--ceeEEEeccccCCCCC
Confidence                        1248999999999999999999999999876621      3455664443  3333332 22111111


Q ss_pred             --ecCcceeEEEEEecc
Q 022818          218 --TKGNAYAQVAISTDD  232 (291)
Q Consensus       218 --~~~~~~~hi~~~v~d  232 (291)
                        ....|...+.+.+++
T Consensus       226 ~~~~~~GLa~~~i~~~~  242 (265)
T COG2514         226 RNANASGLAWLEIHTPD  242 (265)
T ss_pred             CCCCCCCcceEEEEcCC
Confidence              122366777777776

>PRK10291 glyoxalase I; Provisional

Probab=99.84  E-value=2.1e-19  Score=133.68  Aligned_cols=124  Identities=56%  Similarity=1.006  Sum_probs=95.6

Q ss_pred             EEEeCCHHHHHHHHHhhcCCEEEEEeecCCCceeEEEEecCCCCcceEEEeeecCCCCcccCCCCceEEEEEeCCHHHHH
Q 022818           28 VYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIATEDVYKLV  107 (291)
Q Consensus        28 ~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~~~~i~~~v~d~~~~~  107 (291)
                      +|.|+|++++++||+++|||++......++..+..+++..++......+++.......++..+.+..|+||.|+|+++++
T Consensus         1 ~l~V~Dle~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~~hlaf~V~d~~~~~   80 (129)
T PRK10291          1 MLRVGDLQRSIDFYTNVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNWGVDKYELGTAYGHIALSVDNAAEAC   80 (129)
T ss_pred             CEEecCHHHHHHHHHhccCCEEEEeecCCCCcEEEEEEccCCCCCcceEEeeecCCCCCCcCCCCeeEEEEEeCCHHHHH
Confidence            47899999999999999999988766656555667777655433344566654433333445668899999999999999


Q ss_pred             HHHHHcCCeeecCCeecCCCceEEEEEECCCCCEEEEEeCCCCC
Q 022818          108 ENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRGPTP  151 (291)
Q Consensus       108 ~~l~~~G~~~~~~~~~~~~g~~~~~~~~Dp~G~~iel~~~~~~~  151 (291)
                      ++|+++|+++..++...+++....++|+||||++|||++....+
T Consensus        81 ~~l~~~G~~~~~~~~~~~~~~~~~~~i~DPdG~~iel~~~~~~~  124 (129)
T PRK10291         81 EKIRQNGGNVTREAGPVKGGTTVIAFVEDPDGYKIELIEEKDAG  124 (129)
T ss_pred             HHHHHcCCccccCCcccCCCceEEEEEECCCCCEEEEEEccccc
Confidence            99999999988766666666555578899999999999977543

>PLN02367 lactoylglutathione lyase

Probab=99.83  E-value=5.6e-19  Score=140.39  Aligned_cols=130  Identities=36%  Similarity=0.664  Sum_probs=104.2

Q ss_pred             CCcceeeEEEEEEeCCHHHHHHHHHhhcCCEEEEEeecCCCceeEEEEecCCCC---------------cceEEEeeecC
Q 022818           18 KKDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQ---------------SHFVVELTYNY   82 (291)
Q Consensus        18 ~~~~~~i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~l~~~~~~   82 (291)
                      .+.--.+.|++|.|+|++++++||+++|||++..+..+++.++..+++.+++..               ....|++..+.
T Consensus        70 ~t~~~~~~HtmlRVkDle~Sl~FYt~vLGm~ll~r~d~pe~~f~lyFL~~~~~~~~p~d~~~r~~~~~~~~~~LELt~n~  149 (233)
T PLN02367         70 ATKGYIMQQTMYRIKDPKASLDFYSRVLGMSLLKRLDFPEMKFSLYFMGYEDTASAPTDPTERTVWTFGQKATIELTHNW  149 (233)
T ss_pred             CCCCcEEEEEEEEeCCHHHHHHHHHHhcCCEEeEEEecCCCcEEEEEeecCCccccccccccceeeccCCCCEEEEecCC
Confidence            344567899999999999999999999999999998888888888888653311               13468888766


Q ss_pred             CCCc------ccCC----CCceEEEEEeCCHHHHHHHHHHcCCeeecCCeecCCCceEEEEEECCCCCEEEEEeCCC
Q 022818           83 GVTS------YDIG----TGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRGP  149 (291)
Q Consensus        83 ~~~~------~~~g----~~~~~i~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~Dp~G~~iel~~~~~  149 (291)
                      +...      +..|    .|++||||.|+|+++++++|+++|+++...|....+  ...++++||||++|||++...
T Consensus       150 g~e~~~~~~~y~~gn~~p~G~~HIaf~VdDVdaa~erL~a~Gv~~v~~P~~g~~--~riaFIkDPDGn~IEL~e~~~  224 (233)
T PLN02367        150 GTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFEELGVEFVKKPNDGKM--KGIAFIKDPDGYWIEIFDLKT  224 (233)
T ss_pred             CCCccccchhcccCCCCCCCceEEEEEcCCHHHHHHHHHHCCCEEEeCCccCCc--eEEEEEECCCCCEEEEEeccc
Confidence            5431      3333    479999999999999999999999999887765443  335889999999999999764

>PRK10291 glyoxalase I; Provisional

Probab=99.83  E-value=9.6e-20  Score=135.53  Aligned_cols=122  Identities=50%  Similarity=0.902  Sum_probs=92.9

Q ss_pred             EeeeCChhhhHHHHHHhcCCeeeeeeccCCccceEEEeccccCCceeEEEEeeecCcceeecCcceeEEEEEecchHHhH
Q 022818          158 MLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDVYKSA  237 (291)
Q Consensus       158 ~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~hi~~~v~di~~~~  237 (291)
                      .|.|.|++++++||+++|||++......++..+.++++..++......+++..+.+......++++.|++|.|+|+++++
T Consensus         1 ~l~V~Dle~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~~hlaf~V~d~~~~~   80 (129)
T PRK10291          1 MLRVGDLQRSIDFYTNVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNWGVDKYELGTAYGHIALSVDNAAEAC   80 (129)
T ss_pred             CEEecCHHHHHHHHHhccCCEEEEeecCCCCcEEEEEEccCCCCCcceEEeeecCCCCCCcCCCCeeEEEEEeCCHHHHH
Confidence            37899999999999999999987766555555677777654332344566654433333334568899999999999999


Q ss_pred             HHHHHHHHHhCCeeecCCccCCCCCceEEEEECCCCceEEEeechh
Q 022818          238 EVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNED  283 (291)
Q Consensus       238 ~~l~~~~~~~G~~~~~~~~~~~~~~~~~~~~~DpdG~~iel~~~~~  283 (291)
                      ++|    +++|+++..++...+++..+++||+|||||+|||++...
T Consensus        81 ~~l----~~~G~~~~~~~~~~~~~~~~~~~i~DPdG~~iel~~~~~  122 (129)
T PRK10291         81 EKI----RQNGGNVTREAGPVKGGTTVIAFVEDPDGYKIELIEEKD  122 (129)
T ss_pred             HHH----HHcCCccccCCcccCCCceEEEEEECCCCCEEEEEEccc
Confidence            999    999999887766555533467889999999999999764

>cd08342 HPPD_N_like N-terminal domain of 4-hydroxyphenylpyruvate dioxygenase (HPPD) and hydroxymandelate Synthase (HmaS)

Probab=99.83  E-value=1.6e-19  Score=135.48  Aligned_cols=124  Identities=19%  Similarity=0.238  Sum_probs=95.1

Q ss_pred             ceEEEeeeCChhhhHHHHHHhcCCeeeeeeccCCccceEEEeccccCCceeEEEEeeecCcce------eecCcceeEEE
Q 022818          154 LCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTE------YTKGNAYAQVA  227 (291)
Q Consensus       154 ~~~v~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~------~~~~~~~~hi~  227 (291)
                      ++|++|.|+|++++++||+++|||++......++  ....++.  .+  ...+.+........      ...+++..|++
T Consensus         1 ~~Hi~i~V~D~e~s~~FY~~vLGf~~~~~~~~~~--~~~~~~~--~g--~~~l~l~~~~~~~~~~~~~~~~~~~g~~hia   74 (136)
T cd08342           1 FDHVEFYVGNAKQLASWFSTKLGFEPVAYHGSED--KASYLLR--QG--DINFVLNSPLNSFAPVADFLEKHGDGVCDVA   74 (136)
T ss_pred             CeEEEEEeCCHHHHHHHHHHhcCCeEEEecCCCc--eEEEEEE--cC--CEEEEEecCCCCCCchHHHHHhcCCceEEEE
Confidence            5799999999999999999999999877654322  2233343  21  34555543222111      12456889999


Q ss_pred             EEecchHHhHHHHHHHHHHhCCeeecCCccCCCCCceEEEEECCCCceEEEeechhhhhhh
Q 022818          228 ISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNEDFLKEL  288 (291)
Q Consensus       228 ~~v~di~~~~~~l~~~~~~~G~~~~~~~~~~~~~~~~~~~~~DpdG~~iel~~~~~~~~~~  288 (291)
                      |.|+|+++++++|    +++|++++.+|...++ +.+.++++||||++|||++++.+++++
T Consensus        75 ~~V~Dvda~~~~l----~~~G~~v~~~p~~~~~-~~~~~~i~dp~G~~ie~~~~~~~~~~~  130 (136)
T cd08342          75 FRVDDAAAAYERA----VARGAKPVQEPVEEPG-ELKIAAIKGYGDSLHTLVDRKGYKGPF  130 (136)
T ss_pred             EEeCCHHHHHHHH----HHcCCeEccCceecCC-eEEEEEEeccCCcEEEEEecCCCCCcc
Confidence            9999999999999    9999999999887555 568999999999999999999887764

HppD and HmaS are non-heme iron-dependent dioxygenases, which modify a common substrate, 4-hydroxyphenylpyruvate (HPP), but yield different products. HPPD catalyzes the second reaction in tyrosine catabolism, the conversion of HPP to homogentisate (2,5-dihydroxyphenylacetic acid, HG). HmaS converts HPP to 4-hydroxymandelate, a committed step in the formation of hydroxyphenylglycerine, a structural component of nonproteinogenic macrocyclic peptide antibiotics, such as vancomycin. If the emphasis is on catalytic chemistry, HPPD and HmaS are classified as members of a large family of alpha-keto acid dependent mononuclear non-heme iron oxygenases most of which require Fe(II), molecular oxygen, and an alpha-keto acid (typically alpha-ketoglutarate) to either oxygenate or oxidize a third substrate. Both enzymes are exceptions in that they require two, instead of three, su

>PLN03042 Lactoylglutathione lyase; Provisional

Probab=99.82  E-value=2.1e-18  Score=134.48  Aligned_cols=129  Identities=35%  Similarity=0.641  Sum_probs=98.4

Q ss_pred             CCcceeeEEEEEEeCCHHHHHHHHHhhcCCEEEEEeecCCCceeEEEEecCCCC---------------cceEEEeeecC
Q 022818           18 KKDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQ---------------SHFVVELTYNY   82 (291)
Q Consensus        18 ~~~~~~i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~l~~~~~~   82 (291)
                      ++.=-++.|++|.|.|+++|++||+++|||++..+...++..+..+++..++..               ....+++..+.
T Consensus        22 ~~~~~~~~Ht~i~V~Dle~Si~FY~~vLG~~~~~r~~~~~~~~~~~fl~~~~~~~~~~~~~~~~~~l~~~~~~lEL~~~~  101 (185)
T PLN03042         22 ATKGYIMQQTMFRIKDPKASLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDSETAPTDPPERTVWTFGRKATIELTHNW  101 (185)
T ss_pred             CCCCcEEEEEEEeeCCHHHHHHHHHhhcCCEEEEEEEcCCCceEEEEEecCCcccCCcchhhcccccccCCCEEEEEEcC
Confidence            445678999999999999999999999999998887777777777777643210               12357776544


Q ss_pred             CCCc------cc----CCCCceEEEEEeCCHHHHHHHHHHcCCeeecCCeecCCCceEEEEEECCCCCEEEEEeCC
Q 022818           83 GVTS------YD----IGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRG  148 (291)
Q Consensus        83 ~~~~------~~----~g~~~~~i~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~Dp~G~~iel~~~~  148 (291)
                      ...+      +.    .+.|+.|++|.|+|+++++++|+++|+.+...|....+  ..+++|+||+|++|||++..
T Consensus       102 ~~~~~p~~~~~~~~~~~~~G~~Hlaf~V~Dvd~~~~~L~~~Gv~v~~~p~~~~~--~~~~fi~DPdG~~IEl~e~~  175 (185)
T PLN03042        102 GTESDPEFKGYHNGNSDPRGFGHIGITVDDVYKACERFEKLGVEFVKKPDDGKM--KGLAFIKDPDGYWIEIFDLK  175 (185)
T ss_pred             CCcccccccccccCCCCCCCccEEEEEcCCHHHHHHHHHHCCCeEEeCCccCCc--eeEEEEECCCCCEEEEEECC
Confidence            3221      22    12489999999999999999999999998876644322  34578899999999999865

>PLN03042 Lactoylglutathione lyase; Provisional

Probab=99.82  E-value=4.7e-19  Score=138.19  Aligned_cols=129  Identities=32%  Similarity=0.586  Sum_probs=100.1

Q ss_pred             CCCceEEEeeeCChhhhHHHHHHhcCCeeeeeeccCCccceEEEeccccCC---------------ceeEEEEeeecCcc
Q 022818          151 PEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEED---------------QTTVLELTYNYGVT  215 (291)
Q Consensus       151 ~~~~~~v~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~l~l~~~~~~~  215 (291)
                      ..++.|+.|.|.|++++++||+++|||++..+...++.++++++++++...               ....|||..+.+..
T Consensus        25 ~~~~~Ht~i~V~Dle~Si~FY~~vLG~~~~~r~~~~~~~~~~~fl~~~~~~~~~~~~~~~~~~l~~~~~~lEL~~~~~~~  104 (185)
T PLN03042         25 GYIMQQTMFRIKDPKASLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDSETAPTDPPERTVWTFGRKATIELTHNWGTE  104 (185)
T ss_pred             CcEEEEEEEeeCCHHHHHHHHHhhcCCEEEEEEEcCCCceEEEEEecCCcccCCcchhhcccccccCCCEEEEEEcCCCc
Confidence            357999999999999999999999999998887766666788887643210               13478887654322


Q ss_pred             e------ee----cCcceeEEEEEecchHHhHHHHHHHHHHhCCeeecCCccCCCCCceEEEEECCCCceEEEeechhhh
Q 022818          216 E------YT----KGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNEDFL  285 (291)
Q Consensus       216 ~------~~----~~~~~~hi~~~v~di~~~~~~l~~~~~~~G~~~~~~~~~~~~~~~~~~~~~DpdG~~iel~~~~~~~  285 (291)
                      .      +.    .+.|+.||+|.|+|+++++++|    +++|+.+...|....+  .+++||+||||++|||++.+...
T Consensus       105 ~~p~~~~~~~~~~~~~G~~Hlaf~V~Dvd~~~~~L----~~~Gv~v~~~p~~~~~--~~~~fi~DPdG~~IEl~e~~~~~  178 (185)
T PLN03042        105 SDPEFKGYHNGNSDPRGFGHIGITVDDVYKACERF----EKLGVEFVKKPDDGKM--KGLAFIKDPDGYWIEIFDLKRIG  178 (185)
T ss_pred             ccccccccccCCCCCCCccEEEEEcCCHHHHHHHH----HHCCCeEEeCCccCCc--eeEEEEECCCCCEEEEEECCCch
Confidence            1      11    1248899999999999999999    9999999877654322  46788999999999999987654

>KOG0638 consensus 4-hydroxyphenylpyruvate dioxygenase [Amino acid transport and metabolism]

Probab=99.81  E-value=1e-19  Score=146.24  Aligned_cols=228  Identities=22%  Similarity=0.358  Sum_probs=161.1

Q ss_pred             CcceeeEEEEEEeCCHHHHHHHHHhhcCCEEEEEeecCCCc--eeEEEEecCCCCcceEEEeeecCCC-----CcccCCC
Q 022818           19 KDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEK--YSNAFLGFGPEQSHFVVELTYNYGV-----TSYDIGT   91 (291)
Q Consensus        19 ~~~~~i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~~~~~~~-----~~~~~g~   91 (291)
                      -.+.+++||.+.|.|...+..||+..|||+.....+...+.  +....++  ++.+.|++.-..++.-     .-..+|.
T Consensus        13 g~~l~f~Hi~F~vgna~q~A~~y~~~fGfep~A~~~letg~~~~~s~alr--~g~~vFv~~s~~~p~~~~~G~~l~~Hgd   90 (381)
T KOG0638|consen   13 GKFLRFHHIEFWVGNAKQAARWYCSGFGFEPLAYRGLETGSREWASHALR--QGKIVFVFNSAYNPDNSEYGDHLVKHGD   90 (381)
T ss_pred             cceeeeeEEEEEecCcHHHHHHHHhhcCCcchhcccccccchHHHHHHhh--cCCEEEEEecCCCCCchhhhhhhhhccc
Confidence            44889999999999999999999999999998765433221  1222233  3344555443333222     1223677


Q ss_pred             CceEEEEEeCCHHHHHHHHHHcCCeeecCCeecC--CCceEEEEEECCCCCEEEEEeCCCC-------------------
Q 022818           92 GFGHFAIATEDVYKLVENIRAKGGNVTREPGPLK--GGTTHIAFVKDPDGYIFELIQRGPT-------------------  150 (291)
Q Consensus        92 ~~~~i~~~v~d~~~~~~~l~~~G~~~~~~~~~~~--~g~~~~~~~~Dp~G~~iel~~~~~~-------------------  150 (291)
                      ++..+||+|+|++++.+.+.++|+++..+|.+..  .|..+++.+..+.-....+++...-                   
T Consensus        91 gvkdvafeVeD~da~~~~~va~Ga~v~~~p~~~~da~G~v~~A~l~tygd~thtlvEr~~y~g~FLPGF~~v~~~~~fp~  170 (381)
T KOG0638|consen   91 GVKDVAFEVEDADAIFQEAVANGAKVVRPPWEESDAQGAVTYAVLKTYGDTTHTLVERKGYKGPFLPGFEPVSSDALFPK  170 (381)
T ss_pred             chhceEEEecchHHHHHHHHHcCCcccCCcceeeccCCcEEEEEEecccchhhhhhhhccccccCCCCcccCccccccCC
Confidence            8999999999999999999999999998876654  4666677777776555555555421                   


Q ss_pred             -----CCCceEEEeeeC--ChhhhHHHHHHhcCCeeeeeeccCCc-----cceEEEeccccCCceeEEEEeeecCcc---
Q 022818          151 -----PEPLCQVMLRVG--DLGRSIKFYEKALGMKLLRTVDKPEY-----KYTLAMLGYAEEDQTTVLELTYNYGVT---  215 (291)
Q Consensus       151 -----~~~~~~v~l~v~--d~~~~~~fy~~~lG~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~l~l~~~~~~~---  215 (291)
                           ..+++|++.+++  .++.+.+||.+.|||.-.+.++.++-     ..+.+.+....    .++.++.+.+.+   
T Consensus       171 l~~~~~~~iDH~vgn~p~~em~sa~~wy~~~l~Fhrfwsvdd~~v~te~SaLrs~vlan~~----esi~mpinEp~~G~k  246 (381)
T KOG0638|consen  171 LPKGGLNRIDHVVGNQPDGEMESALRWYEKCLGFHRFWSVDDSQVHTEYSALRSIVLANYE----ESIKMPINEPAPGKK  246 (381)
T ss_pred             CCccceeehhhhhccCCcccchHHHHHHHHhhcccccccCCcchhhhHHHHHHHHHHhcCC----ccEEEeccCCCCCCc
Confidence                 125899999998  68899999999999998777664432     12222233222    222333333332   


Q ss_pred             ---------eeecCcceeEEEEEecchHHhHHHHHHHHHHhCCeeecCCc
Q 022818          216 ---------EYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPG  256 (291)
Q Consensus       216 ---------~~~~~~~~~hi~~~v~di~~~~~~l~~~~~~~G~~~~~~~~  256 (291)
                               .+..|+|.+||++.++||-.+++.+    +++|.+++.+|.
T Consensus       247 ~ksQIqeyv~y~gG~GvQHiaL~tedIi~Ai~~l----r~rG~eFLs~Ps  292 (381)
T KOG0638|consen  247 KKSQIQEYVEYHGGAGVQHIALNTEDIIEAIRGL----RARGGEFLSPPS  292 (381)
T ss_pred             cHHHHHHHHHhcCCCceeeeeecchHHHHHHHHH----HhcCCccccCCH
Confidence                     1457889999999999999999999    999999998874

>cd08353 Glo_EDI_BRP_like_7 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.81  E-value=2.7e-18  Score=129.90  Aligned_cols=123  Identities=20%  Similarity=0.320  Sum_probs=89.2

Q ss_pred             ceeeEEEEEEeCCHHHHHHHHHhhcCCEEEEEeecCC-----------CceeEEEEecCCCCcceEEEeeecCCC----C
Q 022818           21 KRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPE-----------EKYSNAFLGFGPEQSHFVVELTYNYGV----T   85 (291)
Q Consensus        21 ~~~i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~l~~~~~~~~----~   85 (291)
                      +++++||+|.|+|++++++||++ |||++..+...++           .....+++...++  ...+++.....+    .
T Consensus         1 ~~~i~Hi~i~v~Dl~~s~~FY~~-LG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~g--~~~iel~~~~~~~~~~~   77 (142)
T cd08353           1 VSRMDNVGIVVRDLEAAIAFFLE-LGLELEGRAEIEGEWADRVTGLDGVRVEIAMLRTPDG--HSRLELSKFHHPAVIAD   77 (142)
T ss_pred             CceeeeEEEEeCCHHHHHHHHHH-cCCEEccccccChHHHHHhcCCCCceEEEEEEeCCCC--CceEEEEEecCCCCcCc
Confidence            57899999999999999999999 9999865543321           2234455543222  334454432111    1


Q ss_pred             ---cccCCCCceEEEEEeCCHHHHHHHHHHcCCeeecCCeecCCCceEEEEEECCCCCEEEEEeC
Q 022818           86 ---SYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQR  147 (291)
Q Consensus        86 ---~~~~g~~~~~i~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~Dp~G~~iel~~~  147 (291)
                         ....+.++.|+||.|+|+++++++|+++|+++..++....+|.+ .+||+||+|+.|||++.
T Consensus        78 ~~~~~~~~~g~~hia~~v~d~d~~~~~l~~~G~~~~~~~~~~~~~~r-~~~~~DPdG~~iEl~e~  141 (142)
T cd08353          78 HRPAPVNALGLRRVMFAVDDIDARVARLRKHGAELVGEVVQYENSYR-LCYIRGPEGILIELAEQ  141 (142)
T ss_pred             CCCCCCCCCCceEEEEEeCCHHHHHHHHHHCCCceeCCceecCCCeE-EEEEECCCCCEEEeeec
Confidence               11234578899999999999999999999998887666655544 48999999999999984

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The structures of this family demonstrate domain swapping, which is shared by glyoxalase I and antibiotic resistance proteins.

>PRK11478 putative lyase; Provisional

Probab=99.80  E-value=3e-18  Score=127.41  Aligned_cols=125  Identities=18%  Similarity=0.223  Sum_probs=84.7

Q ss_pred             CcceeeEEEEEEeCCHHHHHHHHHhhcCCEEEEEeecCCCceeEEEEecCCCCcceEEEeeecCC---CCcccCCCCceE
Q 022818           19 KDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYG---VTSYDIGTGFGH   95 (291)
Q Consensus        19 ~~~~~i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~---~~~~~~g~~~~~   95 (291)
                      ..+++++||+|.|+|++++.+||+++|||++..+...+........+..++   ...+++.....   ........++.|
T Consensus         2 ~~i~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~---~~~l~l~~~~~~~~~~~~~~~~g~~h   78 (129)
T PRK11478          2 LGLKQVHHIAIIATDYAVSKAFYCDILGFTLQSEVYREARDSWKGDLALNG---QYVIELFSFPFPPERPSRPEACGLRH   78 (129)
T ss_pred             CCcceecEEEEEcCCHHHHHHHHHHHhCCEecccccccccccceeeEecCC---CcEEEEEEecCCCCCCCCCCCCceeE
Confidence            467889999999999999999999999999864422211110111222222   22344432211   111112346889


Q ss_pred             EEEEeCCHHHHHHHHHHcCCeeecCCeecCCCceEEEEEECCCCCEEEEEeC
Q 022818           96 FAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQR  147 (291)
Q Consensus        96 i~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~Dp~G~~iel~~~  147 (291)
                      ++|.|+|+++++++|+++|+++...+....+|. .++||+||+||.||+++.
T Consensus        79 i~f~v~d~~~~~~~l~~~G~~~~~~~~~~~~g~-~~~~~~DPdG~~iEl~~~  129 (129)
T PRK11478         79 LAFSVDDIDAAVAHLESHNVKCEAIRVDPYTQK-RFTFFNDPDGLPLELYEQ  129 (129)
T ss_pred             EEEEeCCHHHHHHHHHHcCCeeeccccCCCCCC-EEEEEECCCCCEEEEEeC
Confidence            999999999999999999999765433333454 458999999999999873

>cd07233 Glyoxalase_I Glyoxalase I catalyzes the isomerization of the hemithioacetal, formed by a 2-oxoaldehyde and glutathione, to S-D-lactoylglutathione

Probab=99.80  E-value=2.3e-18  Score=126.48  Aligned_cols=120  Identities=46%  Similarity=0.781  Sum_probs=91.5

Q ss_pred             ceEEEeeeCChhhhHHHHHHhcCCeeeeeeccCCccceEEEeccccCCceeEEEEeeecCc-ceeecCcceeEEEEEecc
Q 022818          154 LCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGV-TEYTKGNAYAQVAISTDD  232 (291)
Q Consensus       154 ~~~v~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~-~~~~~~~~~~hi~~~v~d  232 (291)
                      +.|+.|.|+|++++.+||+++|||++......++.++..+++..+.......+++....+. .....+++..|++|.|+|
T Consensus         1 ~~hv~i~v~d~~~a~~fY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~~v~d   80 (121)
T cd07233           1 FLHTMLRVKDLEKSLDFYTDVLGMKLLRRKDFPEGKFTLVFLGYPDEDSEGVLELTYNWGTEEPYDNGNGFGHLAFAVDD   80 (121)
T ss_pred             CeeEEEEecCcHHHHHHHHhccCCeEEEEEecCCCceEEEEecCCCCCCccEEEEEecCCCCCCcCCCCCeEEEEEEeCC
Confidence            5799999999999999999999999877655444445666666433112455666544332 122344578999999999


Q ss_pred             hHHhHHHHHHHHHHhCCeeecCCccCCCCCceEEEEECCCCceEEEe
Q 022818          233 VYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLV  279 (291)
Q Consensus       233 i~~~~~~l~~~~~~~G~~~~~~~~~~~~~~~~~~~~~DpdG~~iel~  279 (291)
                      ++++++++    +++|+++..+|...  .+.+++||+||+||+|||+
T Consensus        81 id~~~~~l----~~~G~~~~~~~~~~--~~~~~~~~~DpdG~~iE~~  121 (121)
T cd07233          81 VYAACERL----EEMGVEVTKPPGDG--GMKGIAFIKDPDGYWIELI  121 (121)
T ss_pred             HHHHHHHH----HHCCCEEeeCCccC--CCceEEEEECCCCCEEEeC
Confidence            99999999    99999999887765  2458899999999999985

Glyoxalase I (also known as lactoylglutathione lyase; EC 4.4.1.5) is part of the glyoxalase system, a two-step system for detoxifying methylglyoxal, a side product of glycolysis. This system is responsible for the conversion of reactive, acyclic alpha-oxoaldehydes into the corresponding alpha-hydroxyacids and involves 2 enzymes, glyoxalase I and II. Glyoxalase I catalyses an intramolecular redox reaction of the hemithioacetal (formed from methylglyoxal and glutathione) to form the thioester, S-D-lactoylglutathione. This reaction involves the transfer of two hydrogen atoms from C1 to C2 of the methylglyoxal, and proceeds via an ene-diol intermediate. Glyoxalase I has a requirement for bound metal ions for catalysis. Eukaryotic glyoxalase I prefers the divalent cation zinc as cofactor, whereas Escherichia coil and other prokaryotic gly

>cd08353 Glo_EDI_BRP_like_7 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.80  E-value=1.6e-18  Score=131.18  Aligned_cols=122  Identities=18%  Similarity=0.245  Sum_probs=89.8

Q ss_pred             CCceEEEeeeCChhhhHHHHHHhcCCeeeeeeccCC-----------ccceEEEeccccCCceeEEEEeeecCcce----
Q 022818          152 EPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPE-----------YKYTLAMLGYAEEDQTTVLELTYNYGVTE----  216 (291)
Q Consensus       152 ~~~~~v~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~l~l~~~~~~~~----  216 (291)
                      .++.|++|.|+|++++.+||++ |||++..+....+           .+..+.++..+.  ....+++.....+..    
T Consensus         2 ~~i~Hi~i~v~Dl~~s~~FY~~-LG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~--g~~~iel~~~~~~~~~~~~   78 (142)
T cd08353           2 SRMDNVGIVVRDLEAAIAFFLE-LGLELEGRAEIEGEWADRVTGLDGVRVEIAMLRTPD--GHSRLELSKFHHPAVIADH   78 (142)
T ss_pred             ceeeeEEEEeCCHHHHHHHHHH-cCCEEccccccChHHHHHhcCCCCceEEEEEEeCCC--CCceEEEEEecCCCCcCcC
Confidence            4689999999999999999998 9998765432211           223445554322  245677765432211    


Q ss_pred             ---eecCcceeEEEEEecchHHhHHHHHHHHHHhCCeeecCCccCCCCCceEEEEECCCCceEEEeec
Q 022818          217 ---YTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDN  281 (291)
Q Consensus       217 ---~~~~~~~~hi~~~v~di~~~~~~l~~~~~~~G~~~~~~~~~~~~~~~~~~~~~DpdG~~iel~~~  281 (291)
                         ...+.++.||||.|+|+++++++|    +++|+++..+|...+. +.+++||+||||+.|||+|.
T Consensus        79 ~~~~~~~~g~~hia~~v~d~d~~~~~l----~~~G~~~~~~~~~~~~-~~r~~~~~DPdG~~iEl~e~  141 (142)
T cd08353          79 RPAPVNALGLRRVMFAVDDIDARVARL----RKHGAELVGEVVQYEN-SYRLCYIRGPEGILIELAEQ  141 (142)
T ss_pred             CCCCCCCCCceEEEEEeCCHHHHHHHH----HHCCCceeCCceecCC-CeEEEEEECCCCCEEEeeec
Confidence               123457889999999999999999    9999999876655443 46889999999999999984

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The structures of this family demonstrate domain swapping, which is shared by glyoxalase I and antibiotic resistance proteins.

>cd07233 Glyoxalase_I Glyoxalase I catalyzes the isomerization of the hemithioacetal, formed by a 2-oxoaldehyde and glutathione, to S-D-lactoylglutathione

Probab=99.79  E-value=6.9e-18  Score=123.93  Aligned_cols=120  Identities=53%  Similarity=0.952  Sum_probs=89.2

Q ss_pred             eEEEEEEeCCHHHHHHHHHhhcCCEEEEEeecCCCceeEEEEecCCCCcceEEEeeecCCC-CcccCCCCceEEEEEeCC
Q 022818           24 FLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGV-TSYDIGTGFGHFAIATED  102 (291)
Q Consensus        24 i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~~~~~g~~~~~i~~~v~d  102 (291)
                      +.|+.|.|+|++++.+||+++||+++......+++.+..+++..++......+.+...... .+...+.+..|++|.|+|
T Consensus         1 ~~hv~i~v~d~~~a~~fY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~~v~d   80 (121)
T cd07233           1 FLHTMLRVKDLEKSLDFYTDVLGMKLLRRKDFPEGKFTLVFLGYPDEDSEGVLELTYNWGTEEPYDNGNGFGHLAFAVDD   80 (121)
T ss_pred             CeeEEEEecCcHHHHHHHHhccCCeEEEEEecCCCceEEEEecCCCCCCccEEEEEecCCCCCCcCCCCCeEEEEEEeCC
Confidence            5899999999999999999999999987665554455566676543102233444433222 223344578899999999


Q ss_pred             HHHHHHHHHHcCCeeecCCeecCCCceEEEEEECCCCCEEEEE
Q 022818          103 VYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELI  145 (291)
Q Consensus       103 ~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~Dp~G~~iel~  145 (291)
                      +++++++++++|+++...|... + ..++++|+||+|++||++
T Consensus        81 id~~~~~l~~~G~~~~~~~~~~-~-~~~~~~~~DpdG~~iE~~  121 (121)
T cd07233          81 VYAACERLEEMGVEVTKPPGDG-G-MKGIAFIKDPDGYWIELI  121 (121)
T ss_pred             HHHHHHHHHHCCCEEeeCCccC-C-CceEEEEECCCCCEEEeC
Confidence            9999999999999998877655 3 334589999999999984

Glyoxalase I (also known as lactoylglutathione lyase; EC 4.4.1.5) is part of the glyoxalase system, a two-step system for detoxifying methylglyoxal, a side product of glycolysis. This system is responsible for the conversion of reactive, acyclic alpha-oxoaldehydes into the corresponding alpha-hydroxyacids and involves 2 enzymes, glyoxalase I and II. Glyoxalase I catalyses an intramolecular redox reaction of the hemithioacetal (formed from methylglyoxal and glutathione) to form the thioester, S-D-lactoylglutathione. This reaction involves the transfer of two hydrogen atoms from C1 to C2 of the methylglyoxal, and proceeds via an ene-diol intermediate. Glyoxalase I has a requirement for bound metal ions for catalysis. Eukaryotic glyoxalase I prefers the divalent cation zinc as cofactor, whereas Escherichia coil and other prokaryotic gly

>PLN02300 lactoylglutathione lyase

Probab=99.79  E-value=3e-18  Score=144.58  Aligned_cols=131  Identities=47%  Similarity=0.799  Sum_probs=101.8

Q ss_pred             CCCCCceEEEeeeCChhhhHHHHHHhcCCeeeeeeccCCccceEEEeccccCCceeEEEEeeecCcceeecCcceeEEEE
Q 022818          149 PTPEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAI  228 (291)
Q Consensus       149 ~~~~~~~~v~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~hi~~  228 (291)
                      ....++.|++|.|+|++++++||+++|||++..+...++..+...++..+++..+..+++....+......++++.|++|
T Consensus        20 ~~i~~l~Hv~l~V~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~~~g~~hia~   99 (286)
T PLN02300         20 KDKRRMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSNFVVELTYNYGVDKYDIGTGFGHFGI   99 (286)
T ss_pred             cccceEEEEEEEeCCHHHHHHHHHHhcCCEEEEeeecCCCcEEEEEEccCCCCCceEEEEeccCCCCccccCCCccEEEE
Confidence            34568999999999999999999999999987665544444555666544433455677755433333334568889999


Q ss_pred             EecchHHhHHHHHHHHHHhCCeeecCCccCCCCCceEEEEECCCCceEEEeechh
Q 022818          229 STDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNED  283 (291)
Q Consensus       229 ~v~di~~~~~~l~~~~~~~G~~~~~~~~~~~~~~~~~~~~~DpdG~~iel~~~~~  283 (291)
                      .|+|++++++++    +++|+++...|...++++.+++||+|||||.|||+++..
T Consensus       100 ~v~dvd~~~~~l----~~~G~~i~~~~~~~~~g~~~~~~~~DPdG~~iEl~~~~~  150 (286)
T PLN02300        100 AVEDVAKTVELV----KAKGGKVTREPGPVKGGKSVIAFVKDPDGYKFELIQRGP  150 (286)
T ss_pred             EeCCHHHHHHHH----HHCCCeeecCCcccCCCceEEEEEECCCCCEEEEEeCCC
Confidence            999999999999    999999988887776644578899999999999999754

>cd08342 HPPD_N_like N-terminal domain of 4-hydroxyphenylpyruvate dioxygenase (HPPD) and hydroxymandelate Synthase (HmaS)

Probab=99.78  E-value=1.8e-17  Score=124.34  Aligned_cols=120  Identities=19%  Similarity=0.264  Sum_probs=89.7

Q ss_pred             eEEEEEEeCCHHHHHHHHHhhcCCEEEEEeecCCCceeEEEEecCCCCcceEEEeeecCCC-Cc-----ccCCCCceEEE
Q 022818           24 FLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGV-TS-----YDIGTGFGHFA   97 (291)
Q Consensus        24 i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~~-----~~~g~~~~~i~   97 (291)
                      |+|+.|.|+|++++++||+++|||++..+....+  ....++..+  ..  .+.+...... ..     ...+.+..|++
T Consensus         1 ~~Hi~i~V~D~e~s~~FY~~vLGf~~~~~~~~~~--~~~~~~~~g--~~--~l~l~~~~~~~~~~~~~~~~~~~g~~hia   74 (136)
T cd08342           1 FDHVEFYVGNAKQLASWFSTKLGFEPVAYHGSED--KASYLLRQG--DI--NFVLNSPLNSFAPVADFLEKHGDGVCDVA   74 (136)
T ss_pred             CeEEEEEeCCHHHHHHHHHHhcCCeEEEecCCCc--eEEEEEEcC--CE--EEEEecCCCCCCchHHHHHhcCCceEEEE
Confidence            5899999999999999999999999987654321  223334322  22  3333332211 10     12456789999


Q ss_pred             EEeCCHHHHHHHHHHcCCeeecCCeecCCCceEEEEEECCCCCEEEEEeCCCC
Q 022818           98 IATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRGPT  150 (291)
Q Consensus        98 ~~v~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~Dp~G~~iel~~~~~~  150 (291)
                      |.|+|+++++++|+++|+++..+|...++|.+ .++++||+|++|+|++....
T Consensus        75 ~~V~Dvda~~~~l~~~G~~v~~~p~~~~~~~~-~~~i~dp~G~~ie~~~~~~~  126 (136)
T cd08342          75 FRVDDAAAAYERAVARGAKPVQEPVEEPGELK-IAAIKGYGDSLHTLVDRKGY  126 (136)
T ss_pred             EEeCCHHHHHHHHHHcCCeEccCceecCCeEE-EEEEeccCCcEEEEEecCCC
Confidence            99999999999999999999988888666554 58899999999999998755

HppD and HmaS are non-heme iron-dependent dioxygenases, which modify a common substrate, 4-hydroxyphenylpyruvate (HPP), but yield different products. HPPD catalyzes the second reaction in tyrosine catabolism, the conversion of HPP to homogentisate (2,5-dihydroxyphenylacetic acid, HG). HmaS converts HPP to 4-hydroxymandelate, a committed step in the formation of hydroxyphenylglycerine, a structural component of nonproteinogenic macrocyclic peptide antibiotics, such as vancomycin. If the emphasis is on catalytic chemistry, HPPD and HmaS are classified as members of a large family of alpha-keto acid dependent mononuclear non-heme iron oxygenases most of which require Fe(II), molecular oxygen, and an alpha-keto acid (typically alpha-ketoglutarate) to either oxygenate or oxidize a third substrate. Both enzymes are exceptions in that they require two, instead of three, su

>cd08358 Glo_EDI_BRP_like_21 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.78  E-value=2.3e-17  Score=120.70  Aligned_cols=114  Identities=45%  Similarity=0.818  Sum_probs=86.8

Q ss_pred             eeEEEEEEeCCHHHHHHHHHhhcCCEEEEEeecCC-----------CceeEEEEecCCCCcceEEEeeecCCCCcccCCC
Q 022818           23 RFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPE-----------EKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGT   91 (291)
Q Consensus        23 ~i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~   91 (291)
                      ++.|++|.|+|+++|++||+++|||++..+..+++           +.+..+++.+++....+.+++..+.+..++..|.
T Consensus         2 ~~~Hv~irV~DlerSi~FY~~vLG~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~lEL~~n~~~~~~~~g~   81 (127)
T cd08358           2 RALHFVFKVGNRNKTIKFYREVLGMKVLRHEEFEEGCKAACNGPYDGKWSKTMIGYGPEDDHFVVELTYNYGIGDYELGN   81 (127)
T ss_pred             ceEEEEEEeCCHHHHHHHHHHhcCCEEEeeecCccccccccccCCCCcEEEEEEecCCCCCccEEEeEecCCCCCCCCCC
Confidence            68999999999999999999999999887776665           3334455655434556788898877655555554


Q ss_pred             CceEEEEEeCCHHHHHHHHHHcCCeeecCCeecCCCceEEEEEECCCCCEEEEEe
Q 022818           92 GFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQ  146 (291)
Q Consensus        92 ~~~~i~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~Dp~G~~iel~~  146 (291)
                      +  |++|.|++. ++.++|+++|+++...|.    +   ++++.||||+.|||+.
T Consensus        82 ~--~~hlav~~~-d~~~~l~~~Gv~~~~~~~----~---~~fi~DPDG~~ie~~~  126 (127)
T cd08358          82 D--FLGITIHSK-QAVSNAKKHNWPVTEVED----G---VYEVKAPGGYKFYLID  126 (127)
T ss_pred             C--EEEEEEECH-HHHHHHHHCCCceecCCC----C---EEEEECCCCCEEEEec
Confidence            4  667777766 456999999998876543    2   5889999999999974

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd08358 Glo_EDI_BRP_like_21 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.78  E-value=9.4e-18  Score=122.75  Aligned_cols=114  Identities=32%  Similarity=0.580  Sum_probs=85.5

Q ss_pred             CceEEEeeeCChhhhHHHHHHhcCCeeeeeeccCC-----------ccceEEEeccccCCceeEEEEeeecCcceeecCc
Q 022818          153 PLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPE-----------YKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGN  221 (291)
Q Consensus       153 ~~~~v~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~  221 (291)
                      ++.|++|.|+|+++|++||+++|||++..+...++           +.+.++++...++.....++|..+.+..++..|.
T Consensus         2 ~~~Hv~irV~DlerSi~FY~~vLG~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~lEL~~n~~~~~~~~g~   81 (127)
T cd08358           2 RALHFVFKVGNRNKTIKFYREVLGMKVLRHEEFEEGCKAACNGPYDGKWSKTMIGYGPEDDHFVVELTYNYGIGDYELGN   81 (127)
T ss_pred             ceEEEEEEeCCHHHHHHHHHHhcCCEEEeeecCccccccccccCCCCcEEEEEEecCCCCCccEEEeEecCCCCCCCCCC
Confidence            57899999999999999999999999877665554           3344455554333346789998877655555555


Q ss_pred             ceeEEEEEecchHHhHHHHHHHHHHhCCeeecCCccCCCCCceEEEEECCCCceEEEee
Q 022818          222 AYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVD  280 (291)
Q Consensus       222 ~~~hi~~~v~di~~~~~~l~~~~~~~G~~~~~~~~~~~~~~~~~~~~~DpdG~~iel~~  280 (291)
                      +  |++|.|++. ++.++|    +++|+.+...|.       .+++++||||+.|||+.
T Consensus        82 ~--~~hlav~~~-d~~~~l----~~~Gv~~~~~~~-------~~~fi~DPDG~~ie~~~  126 (127)
T cd08358          82 D--FLGITIHSK-QAVSNA----KKHNWPVTEVED-------GVYEVKAPGGYKFYLID  126 (127)
T ss_pred             C--EEEEEEECH-HHHHHH----HHCCCceecCCC-------CEEEEECCCCCEEEEec
Confidence            5  666666665 556888    999998876544       27899999999999985

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd08352 Glo_EDI_BRP_like_1 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.77  E-value=2.2e-17  Score=121.82  Aligned_cols=122  Identities=27%  Similarity=0.334  Sum_probs=84.6

Q ss_pred             ceeeEEEEEEeCCHHHHHHHHHhhcCCEEEEEeecCCCceeEEEEecCCCCcceEEEeeecC--CCC-cccCCCCceEEE
Q 022818           21 KRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNY--GVT-SYDIGTGFGHFA   97 (291)
Q Consensus        21 ~~~i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--~~~-~~~~g~~~~~i~   97 (291)
                      +++++||+|.|+|++++++||+++|||+.......++.......+...+ ..  .+++....  ... ....+.+..|++
T Consensus         1 ~~~~~hi~l~v~d~~~a~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~-~~--~i~l~~~~~~~~~~~~~~~~g~~h~~   77 (125)
T cd08352           1 LFGIHHVAIICSDYEKSKEFYVEILGFKVIREVYRPERGSYKLDLLLNG-GY--QLELFSFPNPPERPSYPEACGLRHLA   77 (125)
T ss_pred             CCccceEEEEcCCHHHHHHHHHHhcCCEEeeeeecCCCCcEEEEEecCC-Cc--EEEEEEcCCCCCCCCCCcCCCceEEE
Confidence            3689999999999999999999999999876543222211112232211 22  23332211  111 111345789999


Q ss_pred             EEeCCHHHHHHHHHHcCCeeecCCeecCCCceEEEEEECCCCCEEEEEe
Q 022818           98 IATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQ  146 (291)
Q Consensus        98 ~~v~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~Dp~G~~iel~~  146 (291)
                      |.|+|+++++++|+++|+++...+....+|.. ++|++||+|++||++|
T Consensus        78 ~~v~d~~~~~~~l~~~G~~~~~~~~~~~~~~~-~~~~~DP~G~~iEl~~  125 (125)
T cd08352          78 FSVEDIEAAVKHLKAKGVEVEPIRVDEFTGKR-FTFFYDPDGLPLELYE  125 (125)
T ss_pred             EEeCCHHHHHHHHHHcCCccccccccCCCceE-EEEEECCCCCEEEecC
Confidence            99999999999999999998776655555544 4899999999999975

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>cd07241 Glo_EDI_BRP_like_3 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.77  E-value=2.1e-17  Score=122.00  Aligned_cols=119  Identities=27%  Similarity=0.418  Sum_probs=85.1

Q ss_pred             eeEEEEEEeCCHHHHHHHHHhhcCCEEEEEeecCCCceeEEEEecCCCCcceEEEeeecCCCCc---ccCCCCceEEEEE
Q 022818           23 RFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTS---YDIGTGFGHFAIA   99 (291)
Q Consensus        23 ~i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~---~~~g~~~~~i~~~   99 (291)
                      +++|++|.|+|++++++||+++|||+...+...+...+...++.+++   ...+++........   .....+..|+||.
T Consensus         1 ~~~Hi~l~v~dl~~s~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~~---~~~~~l~~~~~~~~~~~~~~~~g~~hi~f~   77 (125)
T cd07241           1 KIEHVAIWTKDLERMKAFYVTYFGATSNEKYHNPRKGFESYFLSFDD---GARLELMTRPDIAPSPNEGERTGWAHLAFS   77 (125)
T ss_pred             CceEEEEEecCHHHHHHHHHHHhCCEeeceEeCCCCCceEEEEecCC---CcEEEEEcCcccCCCcccCCCCceEEEEEE
Confidence            57999999999999999999999999865433333333455665542   22344443222111   1123478999999


Q ss_pred             eC---CHHHHHHHHHHcCCeeecCCeecCCCceEEEEEECCCCCEEEEE
Q 022818          100 TE---DVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELI  145 (291)
Q Consensus       100 v~---d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~Dp~G~~iel~  145 (291)
                      |+   ++++++++|+++|+++...|...++|... ++++|||||.|||.
T Consensus        78 v~~~~~v~~~~~~l~~~g~~~~~~~~~~~~g~~~-~~~~DPdG~~iE~~  125 (125)
T cd07241          78 VGSKEAVDELTERLRADGYLIIGEPRTTGDGYYE-SVILDPEGNRIEIT  125 (125)
T ss_pred             CCCHHHHHHHHHHHHHCCCEEEeCceecCCCeEE-EEEECCCCCEEEeC
Confidence            95   48999999999999988877666666554 67999999999973

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>PRK11478 putative lyase; Provisional

Probab=99.77  E-value=1.3e-17  Score=123.93  Aligned_cols=120  Identities=22%  Similarity=0.218  Sum_probs=83.1

Q ss_pred             CCceEEEeeeCChhhhHHHHHHhcCCeeeeeeccCC-ccceEEEeccccCCceeEEEEeeecCcce---eecCcceeEEE
Q 022818          152 EPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPE-YKYTLAMLGYAEEDQTTVLELTYNYGVTE---YTKGNAYAQVA  227 (291)
Q Consensus       152 ~~~~~v~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~l~~~~~~~~---~~~~~~~~hi~  227 (291)
                      .++.|++|.|+|++++.+||+++|||++......++ ..+.. .+....   ...+++.....+..   .....++.|++
T Consensus         5 ~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~-~~~~~~---~~~l~l~~~~~~~~~~~~~~~~g~~hi~   80 (129)
T PRK11478          5 KQVHHIAIIATDYAVSKAFYCDILGFTLQSEVYREARDSWKG-DLALNG---QYVIELFSFPFPPERPSRPEACGLRHLA   80 (129)
T ss_pred             ceecEEEEEcCCHHHHHHHHHHHhCCEeccccccccccccee-eEecCC---CcEEEEEEecCCCCCCCCCCCCceeEEE
Confidence            468999999999999999999999999764322221 11111 122111   34566644222111   12234788999


Q ss_pred             EEecchHHhHHHHHHHHHHhCCeeecCCccCCCCCceEEEEECCCCceEEEee
Q 022818          228 ISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVD  280 (291)
Q Consensus       228 ~~v~di~~~~~~l~~~~~~~G~~~~~~~~~~~~~~~~~~~~~DpdG~~iel~~  280 (291)
                      |.|+|+++++++|    +++|+++...+.. +..+.+++||+|||||.|||+|
T Consensus        81 f~v~d~~~~~~~l----~~~G~~~~~~~~~-~~~g~~~~~~~DPdG~~iEl~~  128 (129)
T PRK11478         81 FSVDDIDAAVAHL----ESHNVKCEAIRVD-PYTQKRFTFFNDPDGLPLELYE  128 (129)
T ss_pred             EEeCCHHHHHHHH----HHcCCeeeccccC-CCCCCEEEEEECCCCCEEEEEe
Confidence            9999999999999    9999998644332 3334688999999999999987

>PRK04101 fosfomycin resistance protein FosB; Provisional

Probab=99.76  E-value=3.9e-17  Score=122.98  Aligned_cols=118  Identities=21%  Similarity=0.385  Sum_probs=87.0

Q ss_pred             cceeeEEEEEEeCCHHHHHHHHHhhcCCEEEEEeecCCCceeEEEEecCCCCcceEEEeeecCCCCcccCCCCceEEEEE
Q 022818           20 DKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIA   99 (291)
Q Consensus        20 ~~~~i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~~~~i~~~   99 (291)
                      |+.+|.|+.|.|+|++++.+||+++||+++..+..      ...++..++    ..+.+...........+.+..|++|.
T Consensus         1 ~i~~i~hi~L~v~Dl~~s~~FY~~~lG~~~~~~~~------~~~~~~~~g----~~l~l~~~~~~~~~~~~~~~~hiaf~   70 (139)
T PRK04101          1 MLKGINHICFSVSNLEKSIEFYEKVLGAKLLVKGR------KTAYFDLNG----LWIALNEEKDIPRNEIHQSYTHIAFS   70 (139)
T ss_pred             CCCcEEEEEEEecCHHHHHHHHHhccCCEEEeecC------eeEEEecCC----eEEEeeccCCCCCccCCCCeeEEEEE
Confidence            57899999999999999999999999999875422      234555432    22333222211111223467899999


Q ss_pred             eC--CHHHHHHHHHHcCCeeecCCeecCCCceEEEEEECCCCCEEEEEeCC
Q 022818          100 TE--DVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRG  148 (291)
Q Consensus       100 v~--d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~Dp~G~~iel~~~~  148 (291)
                      ++  |+++++++|+++|+++...+....++.. .++++||+||+||+.+..
T Consensus        71 v~~~dv~~~~~~l~~~G~~i~~~~~~~~~~~~-~~~~~DPdGn~iEl~~~~  120 (139)
T PRK04101         71 IEEEDFDHWYQRLKENDVNILPGRERDERDKK-SIYFTDPDGHKFEFHTGT  120 (139)
T ss_pred             ecHHHHHHHHHHHHHCCceEcCCccccCCCce-EEEEECCCCCEEEEEeCC
Confidence            97  9999999999999998766655555554 489999999999999875

>cd07243 2_3_CTD_C C-terminal domain of catechol 2,3-dioxygenase

Probab=99.76  E-value=2.3e-17  Score=124.66  Aligned_cols=121  Identities=12%  Similarity=0.122  Sum_probs=83.2

Q ss_pred             CCCceEEEeeeCChhhhHHHHHHhcCCeeeeeeccCCccc-eEEEeccccCCceeEEEEeeecCcceeecCcceeEEEEE
Q 022818          151 PEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKY-TLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAIS  229 (291)
Q Consensus       151 ~~~~~~v~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~hi~~~  229 (291)
                      +.++.||+|.|+|++++.+||+++|||++..+...+++.. ...++.....  ...+.+..       ..++++.|+||.
T Consensus         4 ~~~l~Hv~l~v~Dle~s~~FY~~vLGf~~~~~~~~~~~~~~~~~~l~~~~~--~h~~~~~~-------~~~~~~~Hiaf~   74 (143)
T cd07243           4 AHRLDHCLLTGEDIAETTRFFTDVLDFYLAERVVDPDGGTRVGSFLSCSNK--PHDIAFVG-------GPDGKLHHFSFF   74 (143)
T ss_pred             CceeCEEEEecCCHHHHHHHHHHhcCCEEEEEEecCCCCeEEEEEEecCCC--cceEEEec-------CCCCCceEEEEE
Confidence            4578999999999999999999999999876643322211 2233432222  23333321       113578999999


Q ss_pred             ecchHHhHHHHHHHHHHhCCeeecCCccCCCCCceEEEEECCCCceEEEeec
Q 022818          230 TDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDN  281 (291)
Q Consensus       230 v~di~~~~~~l~~~~~~~G~~~~~~~~~~~~~~~~~~~~~DpdG~~iel~~~  281 (291)
                      |+|+++.. ++.++|+++|+++...|..+..++++++||+|||||+|||.+.
T Consensus        75 v~d~~~l~-~~~~~l~~~Gv~i~~~p~~~~~~~~~~~yf~DPdG~~iEl~~~  125 (143)
T cd07243          75 LESWEDVL-KAGDIISMNDVSIDIGPTRHGITRGQTIYFFDPSGNRNETFAG  125 (143)
T ss_pred             cCCHHHHH-HHHHHHHHcCCceEECCcCCCCCCceEEEEECCCCCEEEEecC
Confidence            99977642 2223349999998777765543345789999999999999865

This subfamily contains the C-terminal, catalytic, domain of catechol 2,3-dioxygenase. Catechol 2,3-dioxygenase (2,3-CTD, catechol:oxygen 2,3-oxidoreductase) catalyzes an extradiol cleavage of catechol to form 2-hydroxymuconate semialdehyde with the insertion of two atoms of oxygen. The enzyme is a homotetramer and contains catalytically essential Fe(II) . The reaction proceeds by an ordered bi-unit mechanism. First, catechol binds to the enzyme, this is then followed by the binding of dioxygen to form a tertiary complex, and then the aromatic ring is cleaved to produce 2-hydroxymuconate semialdehyde. Catechol 2,3-dioxygenase belongs to the type I extradiol dioxygenase family. The subunit comprises the N- and C-terminal domains of similar structure fold, resulting from an ancient gene duplication. The active site is located in a funnel-shaped space of the C-terminal domain. This subfamily represents the C-terminal domain.

>cd07241 Glo_EDI_BRP_like_3 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.76  E-value=2.2e-17  Score=121.85  Aligned_cols=119  Identities=19%  Similarity=0.268  Sum_probs=83.2

Q ss_pred             CceEEEeeeCChhhhHHHHHHhcCCeeeeeeccCCccceEEEeccccCCceeEEEEeeecCcce---eecCcceeEEEEE
Q 022818          153 PLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTE---YTKGNAYAQVAIS  229 (291)
Q Consensus       153 ~~~~v~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~---~~~~~~~~hi~~~  229 (291)
                      ++.|++|.|+|++++++||+++|||++......+..++...++..++   +..+++........   ....+++.|++|.
T Consensus         1 ~~~Hi~l~v~dl~~s~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~~---~~~~~l~~~~~~~~~~~~~~~~g~~hi~f~   77 (125)
T cd07241           1 KIEHVAIWTKDLERMKAFYVTYFGATSNEKYHNPRKGFESYFLSFDD---GARLELMTRPDIAPSPNEGERTGWAHLAFS   77 (125)
T ss_pred             CceEEEEEecCHHHHHHHHHHHhCCEeeceEeCCCCCceEEEEecCC---CcEEEEEcCcccCCCcccCCCCceEEEEEE
Confidence            47899999999999999999999999765443333334444554332   34566654322111   1233578999999


Q ss_pred             ecc---hHHhHHHHHHHHHHhCCeeecCCccCCCCCceEEEEECCCCceEEEe
Q 022818          230 TDD---VYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLV  279 (291)
Q Consensus       230 v~d---i~~~~~~l~~~~~~~G~~~~~~~~~~~~~~~~~~~~~DpdG~~iel~  279 (291)
                      |+|   +++++++|    +++|+++..+|...+. +.+.++++|||||.|||.
T Consensus        78 v~~~~~v~~~~~~l----~~~g~~~~~~~~~~~~-g~~~~~~~DPdG~~iE~~  125 (125)
T cd07241          78 VGSKEAVDELTERL----RADGYLIIGEPRTTGD-GYYESVILDPEGNRIEIT  125 (125)
T ss_pred             CCCHHHHHHHHHHH----HHCCCEEEeCceecCC-CeEEEEEECCCCCEEEeC
Confidence            965   67777777    9999999877754443 335578999999999983

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>TIGR03645 glyox_marine lactoylglutathione lyase family protein

Probab=99.76  E-value=2.2e-17  Score=127.40  Aligned_cols=125  Identities=20%  Similarity=0.210  Sum_probs=86.7

Q ss_pred             CCceEEEeeeCChhhhHHHHHHhcCCeeeeee----cc--------------CCccceEEEeccccCCceeEEEEeeecC
Q 022818          152 EPLCQVMLRVGDLGRSIKFYEKALGMKLLRTV----DK--------------PEYKYTLAMLGYAEEDQTTVLELTYNYG  213 (291)
Q Consensus       152 ~~~~~v~l~v~d~~~~~~fy~~~lG~~~~~~~----~~--------------~~~~~~~~~~~~~~~~~~~~l~l~~~~~  213 (291)
                      .+++||.|.|+|+++|++||+++|||++..+.    ..              ......+.++..++   +..|++.....
T Consensus         3 ~~i~Hv~i~V~Dle~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~---~~~ieL~~~~~   79 (162)
T TIGR03645         3 RTFSHIGISVPDLDAAVKFYTEVLGWYLIMPPTEIVEDDSAIGEMCTDVFGEGWGSFKIAHLSTGD---RIGVELFEFKN   79 (162)
T ss_pred             ceEEEEEEEeCCHHHHHHHHHHhcCCEEEeccccccCCCCCCCchhhHHhCCCcceeeEEEEecCC---CCcEEEEeccC
Confidence            46899999999999999999999999875321    10              11124455555332   34467765443


Q ss_pred             cce-e----ecCcceeEEEEEecchHHhHHHHHHHHHHhCCeeecCCcc-C-CCC-CceEEEEECCCCceEEEeechh
Q 022818          214 VTE-Y----TKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGS-I-PGL-NTKITSFVDPDGWKTVLVDNED  283 (291)
Q Consensus       214 ~~~-~----~~~~~~~hi~~~v~di~~~~~~l~~~~~~~G~~~~~~~~~-~-~~~-~~~~~~~~DpdG~~iel~~~~~  283 (291)
                      +.. .    ..+.|..|++|.|+|+++++++|    +++|+++...+.. . ++. ..+++|++|||||.|||+++..
T Consensus        80 ~~~~~~~~~~~~~g~~Hla~~v~dida~~~~l----~~~G~~~~~~~~~~~~~~~~~~~~~~~~DPdG~~iEl~~~~~  153 (162)
T TIGR03645        80 QENPEDNFEYWKTGVFHFCVQDPDVEGLAERI----VAAGGKKRMPVPRYYYPGEKPYRMIYMEDPFGNILEIYSHSY  153 (162)
T ss_pred             CCCCCcccccccccceEEEEEcCCHHHHHHHH----HHcCCcccCCCccccCCCCCceEEEEEECCCCCEEEEEEcCh
Confidence            221 1    12458899999999999999999    9999876443211 1 111 1278999999999999998864

Members of this protein family share homology with lactoylglutathione lyase (glyoxalase I) and are found mainly in marine members of the gammaproteobacteria, including CPS_0532 from Colwellia psychrerythraea 34H. This family excludes a well-separated, more narrowly distributed paralogous family, exemplified by CPS_3492 from C. psychrerythraea. The function is of this protein family is unknown.

>cd07257 THT_oxygenase_C The C-terminal domain of 2,4,5-Trihydroxytoluene (THT) oxygenase, which is an extradiol dioxygenease in the 2,4-dinitrotoluene (DNT) degradation pathway

Probab=99.76  E-value=9.1e-18  Score=128.40  Aligned_cols=120  Identities=19%  Similarity=0.226  Sum_probs=86.5

Q ss_pred             CceEEEeeeCChhhhHHHHHHhcCCeeeeeeccC-CccceEEEeccccCCc---eeEEEEeeecCcceeecCcceeEEEE
Q 022818          153 PLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKP-EYKYTLAMLGYAEEDQ---TTVLELTYNYGVTEYTKGNAYAQVAI  228 (291)
Q Consensus       153 ~~~~v~l~v~d~~~~~~fy~~~lG~~~~~~~~~~-~~~~~~~~~~~~~~~~---~~~l~l~~~~~~~~~~~~~~~~hi~~  228 (291)
                      ++.||+|.|+|++++++||+++||+++......+ .......++..+.+..   ...+.+..       ..++++.||||
T Consensus         1 ri~Hv~l~V~Dle~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~-------~~~~g~~Hiaf   73 (153)
T cd07257           1 RLGHVVLEVPDFAASFDWYTETFGLKPSDVIYLPGPGNPVAAFLRLDRGEEYVDHHTLALAQ-------GPESGVHHAAF   73 (153)
T ss_pred             CccEEEEecCCHHHHHHHHHHhcCCeEEeeEecCCCCCcEEEEEecCCCCCcccchHHHHhc-------CCCCceeEEEE
Confidence            5789999999999999999999999987654433 2223455555322100   11111111       12468999999


Q ss_pred             EecchHHhH---HHHHHHHHHhCCeeecCCccCCCCCceEEEEECCCCceEEEeechh
Q 022818          229 STDDVYKSA---EVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNED  283 (291)
Q Consensus       229 ~v~di~~~~---~~l~~~~~~~G~~~~~~~~~~~~~~~~~~~~~DpdG~~iel~~~~~  283 (291)
                      .|+|++++.   ++|    +++|+++...|...+.+...++|++||+||+|||.....
T Consensus        74 ~v~die~~~~~~~~L----~~~Gv~v~~~~g~~~~g~~~~~y~~DPdG~~iEl~~~~~  127 (153)
T cd07257          74 EVHDFDAQGLGHDYL----REKGYEHVWGVGRHILGSQIFDYWFDPWGFIVEHYTDGD  127 (153)
T ss_pred             EcCCHHHHHHHHHHH----HHCCCcEeecCCccCCCCCEEEEEECCCCCEEEEEcCce
Confidence            999988876   677    999999988887766544567899999999999997654

This subfamily contains the C-terminal, catalytic, domain of THT oxygenase. THT oxygenase is an extradiol dioxygenase in the 2,4-dinitrotoluene (DNT) degradation pathway. It catalyzes the conversion of 2,4,5-trihydroxytoluene to an unstable ring fission product, 2,4-dihydroxy-5-methyl-6-oxo-2,4-hexadienoic acid. The native protein was determined to be a dimer by gel filtration. The enzyme belongs to the type I family of extradiol dioxygenases which contains two structurally homologous barrel-shaped domains at the N- and C-terminus of each monomer. The active-site metal is located in the C-terminal barrel. Fe(II) is required for its catalytic activity.

>TIGR03645 glyox_marine lactoylglutathione lyase family protein

Probab=99.75  E-value=7.8e-17  Score=124.36  Aligned_cols=127  Identities=30%  Similarity=0.352  Sum_probs=86.2

Q ss_pred             ceeeEEEEEEeCCHHHHHHHHHhhcCCEEEEEe----ec--------------CCCceeEEEEecCCCCcceEEEeeecC
Q 022818           21 KRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKR----DV--------------PEEKYSNAFLGFGPEQSHFVVELTYNY   82 (291)
Q Consensus        21 ~~~i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~----~~--------------~~~~~~~~~~~~~~~~~~~~l~~~~~~   82 (291)
                      .++++||+|.|+|+++|++||+++|||++..+.    ..              ....+...++..++   ...+++....
T Consensus         2 ~~~i~Hv~i~V~Dle~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~---~~~ieL~~~~   78 (162)
T TIGR03645         2 PRTFSHIGISVPDLDAAVKFYTEVLGWYLIMPPTEIVEDDSAIGEMCTDVFGEGWGSFKIAHLSTGD---RIGVELFEFK   78 (162)
T ss_pred             CceEEEEEEEeCCHHHHHHHHHHhcCCEEEeccccccCCCCCCCchhhHHhCCCcceeeEEEEecCC---CCcEEEEecc
Confidence            367999999999999999999999999875321    10              01124455665443   2224444432


Q ss_pred             CCC-cc----cCCCCceEEEEEeCCHHHHHHHHHHcCCeeecCC-eec-CC-CceEEEEEECCCCCEEEEEeCCCC
Q 022818           83 GVT-SY----DIGTGFGHFAIATEDVYKLVENIRAKGGNVTREP-GPL-KG-GTTHIAFVKDPDGYIFELIQRGPT  150 (291)
Q Consensus        83 ~~~-~~----~~g~~~~~i~~~v~d~~~~~~~l~~~G~~~~~~~-~~~-~~-g~~~~~~~~Dp~G~~iel~~~~~~  150 (291)
                      ... +.    ..+.|..|+||.|+|+++++++|+++|+++...+ ... ++ ...+++|++|||||+|||++...+
T Consensus        79 ~~~~~~~~~~~~~~g~~Hla~~v~dida~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~~DPdG~~iEl~~~~~~  154 (162)
T TIGR03645        79 NQENPEDNFEYWKTGVFHFCVQDPDVEGLAERIVAAGGKKRMPVPRYYYPGEKPYRMIYMEDPFGNILEIYSHSYE  154 (162)
T ss_pred             CCCCCCcccccccccceEEEEEcCCHHHHHHHHHHcCCcccCCCccccCCCCCceEEEEEECCCCCEEEEEEcChh
Confidence            211 11    1246899999999999999999999998754332 211 11 123468999999999999998643

Members of this protein family share homology with lactoylglutathione lyase (glyoxalase I) and are found mainly in marine members of the gammaproteobacteria, including CPS_0532 from Colwellia psychrerythraea 34H. This family excludes a well-separated, more narrowly distributed paralogous family, exemplified by CPS_3492 from C. psychrerythraea. The function is of this protein family is unknown.

>cd07257 THT_oxygenase_C The C-terminal domain of 2,4,5-Trihydroxytoluene (THT) oxygenase, which is an extradiol dioxygenease in the 2,4-dinitrotoluene (DNT) degradation pathway

Probab=99.75  E-value=3.2e-17  Score=125.40  Aligned_cols=119  Identities=26%  Similarity=0.337  Sum_probs=86.6

Q ss_pred             eeEEEEEEeCCHHHHHHHHHhhcCCEEEEEeecC-CCceeEEEEecCCCCcc---eEEEeeecCCCCcccCCCCceEEEE
Q 022818           23 RFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVP-EEKYSNAFLGFGPEQSH---FVVELTYNYGVTSYDIGTGFGHFAI   98 (291)
Q Consensus        23 ~i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~-~~~~~~~~~~~~~~~~~---~~l~~~~~~~~~~~~~g~~~~~i~~   98 (291)
                      +|+||+|.|+|++++++||+++||+++..+...+ .......++..++....   ..+.+..       ..+.+++|+||
T Consensus         1 ri~Hv~l~V~Dle~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~-------~~~~g~~Hiaf   73 (153)
T cd07257           1 RLGHVVLEVPDFAASFDWYTETFGLKPSDVIYLPGPGNPVAAFLRLDRGEEYVDHHTLALAQ-------GPESGVHHAAF   73 (153)
T ss_pred             CccEEEEecCCHHHHHHHHHHhcCCeEEeeEecCCCCCcEEEEEecCCCCCcccchHHHHhc-------CCCCceeEEEE
Confidence            5799999999999999999999999987654433 22334566665332110   0011111       11458999999


Q ss_pred             EeCCHHHHH---HHHHHcCCeeecCCeecCCCceEEEEEECCCCCEEEEEeCC
Q 022818           99 ATEDVYKLV---ENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRG  148 (291)
Q Consensus        99 ~v~d~~~~~---~~l~~~G~~~~~~~~~~~~g~~~~~~~~Dp~G~~iel~~~~  148 (291)
                      .|+|++++.   ++|+++|+++...+.....|...++|++||+||.||+....
T Consensus        74 ~v~die~~~~~~~~L~~~Gv~v~~~~g~~~~g~~~~~y~~DPdG~~iEl~~~~  126 (153)
T cd07257          74 EVHDFDAQGLGHDYLREKGYEHVWGVGRHILGSQIFDYWFDPWGFIVEHYTDG  126 (153)
T ss_pred             EcCCHHHHHHHHHHHHHCCCcEeecCCccCCCCCEEEEEECCCCCEEEEEcCc
Confidence            999999886   99999999988766655545555689999999999998765

This subfamily contains the C-terminal, catalytic, domain of THT oxygenase. THT oxygenase is an extradiol dioxygenase in the 2,4-dinitrotoluene (DNT) degradation pathway. It catalyzes the conversion of 2,4,5-trihydroxytoluene to an unstable ring fission product, 2,4-dihydroxy-5-methyl-6-oxo-2,4-hexadienoic acid. The native protein was determined to be a dimer by gel filtration. The enzyme belongs to the type I family of extradiol dioxygenases which contains two structurally homologous barrel-shaped domains at the N- and C-terminus of each monomer. The active-site metal is located in the C-terminal barrel. Fe(II) is required for its catalytic activity.

>cd07243 2_3_CTD_C C-terminal domain of catechol 2,3-dioxygenase

Probab=99.75  E-value=1.1e-16  Score=120.98  Aligned_cols=119  Identities=17%  Similarity=0.213  Sum_probs=84.1

Q ss_pred             cceeeEEEEEEeCCHHHHHHHHHhhcCCEEEEEeecCCCce-eEEEEecCCCCcceEEEeeecCCCCcccCCCCceEEEE
Q 022818           20 DKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKY-SNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAI   98 (291)
Q Consensus        20 ~~~~i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~~~~i~~   98 (291)
                      .+++|+|++|.|+|++++.+||+++|||++..+...+++.. ...|+..+. ..+ .+.+...       .+.+++|+||
T Consensus         3 ~~~~l~Hv~l~v~Dle~s~~FY~~vLGf~~~~~~~~~~~~~~~~~~l~~~~-~~h-~~~~~~~-------~~~~~~Hiaf   73 (143)
T cd07243           3 GAHRLDHCLLTGEDIAETTRFFTDVLDFYLAERVVDPDGGTRVGSFLSCSN-KPH-DIAFVGG-------PDGKLHHFSF   73 (143)
T ss_pred             CCceeCEEEEecCCHHHHHHHHHHhcCCEEEEEEecCCCCeEEEEEEecCC-Ccc-eEEEecC-------CCCCceEEEE
Confidence            47789999999999999999999999999876643322222 234554332 222 2333221       1347899999


Q ss_pred             EeCCHHH---HHHHHHHcCCeeecCCeecCCCceEEEEEECCCCCEEEEEeC
Q 022818           99 ATEDVYK---LVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQR  147 (291)
Q Consensus        99 ~v~d~~~---~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~Dp~G~~iel~~~  147 (291)
                      .|+|+++   +.++|+++|+++...|.....+...++||+||+||.|||...
T Consensus        74 ~v~d~~~l~~~~~~l~~~Gv~i~~~p~~~~~~~~~~~yf~DPdG~~iEl~~~  125 (143)
T cd07243          74 FLESWEDVLKAGDIISMNDVSIDIGPTRHGITRGQTIYFFDPSGNRNETFAG  125 (143)
T ss_pred             EcCCHHHHHHHHHHHHHcCCceEECCcCCCCCCceEEEEECCCCCEEEEecC
Confidence            9999777   678999999998766544332233358999999999999764

This subfamily contains the C-terminal, catalytic, domain of catechol 2,3-dioxygenase. Catechol 2,3-dioxygenase (2,3-CTD, catechol:oxygen 2,3-oxidoreductase) catalyzes an extradiol cleavage of catechol to form 2-hydroxymuconate semialdehyde with the insertion of two atoms of oxygen. The enzyme is a homotetramer and contains catalytically essential Fe(II) . The reaction proceeds by an ordered bi-unit mechanism. First, catechol binds to the enzyme, this is then followed by the binding of dioxygen to form a tertiary complex, and then the aromatic ring is cleaved to produce 2-hydroxymuconate semialdehyde. Catechol 2,3-dioxygenase belongs to the type I extradiol dioxygenase family. The subunit comprises the N- and C-terminal domains of similar structure fold, resulting from an ancient gene duplication. The active site is located in a funnel-shaped space of the C-terminal domain. This subfamily represents the C-terminal domain.

>cd07265 2_3_CTD_N N-terminal domain of catechol 2,3-dioxygenase

Probab=99.75  E-value=7.7e-17  Score=118.63  Aligned_cols=116  Identities=26%  Similarity=0.297  Sum_probs=83.2

Q ss_pred             ceeeEEEEEEeCCHHHHHHHHHhhcCCEEEEEeecCCCceeEEEEecCCCCcceEEEeeecCCCCcccCCCCceEEEEEe
Q 022818           21 KRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIAT  100 (291)
Q Consensus        21 ~~~i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~~~~i~~~v  100 (291)
                      +++|+|+.|.|+|++++.+||+++|||++....+  ++   .+++..........+.+...       ...+..|++|.|
T Consensus         2 ~~~l~hv~l~v~Dl~~s~~FY~~~lG~~~~~~~~--~~---~~~~~~~~~~~~~~~~l~~~-------~~~~~~hiaf~v   69 (122)
T cd07265           2 VLRPGHVQLRVLDLEEAIKHYREVLGLDEVGRDD--QG---RVYLKAWDEFDHHSIVLREA-------DTAGLDFMGFKV   69 (122)
T ss_pred             cceEeEEEEEeCCHHHHHHHHHhccCCEeeeecC--Cc---eEEEEccCCCcccEEEeccC-------CCCCeeEEEEEe
Confidence            6799999999999999999999999999875532  11   23444322122233333211       133678999999


Q ss_pred             C---CHHHHHHHHHHcCCeeecCCeecCCCceEEEEEECCCCCEEEEEeCC
Q 022818          101 E---DVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRG  148 (291)
Q Consensus       101 ~---d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~Dp~G~~iel~~~~  148 (291)
                      .   |+++++++|+++|+++...|.....+....+||+||+||+||+....
T Consensus        70 ~~~~dv~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~DPdG~~iE~~~~~  120 (122)
T cd07265          70 LDDADLEKLEARLQAYGVAVERIPAGELPGVGRRVRFQLPSGHTMELYADK  120 (122)
T ss_pred             CCHHHHHHHHHHHHHCCCcEEEcccCCCCCCceEEEEECCCCCEEEEEEec
Confidence            6   79999999999999987655443333333589999999999998754

This subfamily contains the N-terminal, non-catalytic, domain of catechol 2,3-dioxygenase. Catechol 2,3-dioxygenase (2,3-CTD, catechol:oxygen 2,3-oxidoreductase) catalyzes an extradiol cleavage of catechol to form 2-hydroxymuconate semialdehyde with the insertion of two atoms of oxygen. The enzyme is a homotetramer and contains catalytically essential Fe(II) . The reaction proceeds by an ordered bi-unit mechanism. First, catechol binds to the enzyme, this is then followed by the binding of dioxygen to form a tertiary complex, and then the aromatic ring is cleaved to produce 2-hydroxymuconate semialdehyde. Catechol 2,3-dioxygenase belongs to the type I extradiol dioxygenase family. The subunit comprises the N- and C-terminal domains of similar structure fold, resulting from an ancient gene duplication. The active site is located in a funnel-shaped space of the C-terminal domain. This subfamily represents the N-terminal do

>cd08360 MhqB_like_C C-terminal domain of Burkholderia sp

Probab=99.75  E-value=4.9e-17  Score=121.68  Aligned_cols=122  Identities=20%  Similarity=0.157  Sum_probs=86.5

Q ss_pred             CCCceEEEeeeCChhhhHHHHHHhcCCeeeeeeccCCccceEEEeccccCCceeEEEEeeecCcceeecCcceeEEEEEe
Q 022818          151 PEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAIST  230 (291)
Q Consensus       151 ~~~~~~v~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~hi~~~v  230 (291)
                      +.++.|+.|.|.|++++.+||+++||+++.....  .   ...++..+....+..+.+.....     ...++.|++|.|
T Consensus         1 ~~~l~hi~l~v~dl~~s~~FY~~vlGl~~~~~~~--~---~~~~~~~~~~~~~~~i~l~~~~~-----~~~g~~hiaf~v   70 (134)
T cd08360           1 PRRLGHVVLFVPDVEAAEAFYRDRLGFRVSDRFK--G---RGAFLRAAGGGDHHNLFLIKTPA-----PMAGFHHAAFEV   70 (134)
T ss_pred             CceeeEEEEEcCCHHHHHHHHHHhcCCEEEEEec--C---cEEEEECCCCCCCcEEEEecCCC-----CCCcceEEEEEe
Confidence            4578999999999999999999999999765532  1   22344432212244555533211     136889999999


Q ss_pred             cchHHhHHHHHHHHHHhCCeeecCCccCCCCCceEEEEECCCCceEEEeechh
Q 022818          231 DDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNED  283 (291)
Q Consensus       231 ~di~~~~~~l~~~~~~~G~~~~~~~~~~~~~~~~~~~~~DpdG~~iel~~~~~  283 (291)
                      +|+++..+ +.++|+++|+++...|...+..+.+++||+||+||+|||.....
T Consensus        71 ~d~~~~~~-~~~~l~~~G~~~~~~~~~~~~~~~~~~y~~DP~G~~iEl~~~~~  122 (134)
T cd08360          71 GDIDEVML-GGNHMLRAGYQTGWGPGRHRIGSNYFWYFRDPWGGEVEYGADMD  122 (134)
T ss_pred             CCHHHHHH-HHHHHHHcCCccccCCCCcCCCccEEEEEECCCCCEEEEEcccc
Confidence            99776654 22333999999887777766544567899999999999986544

NF100 MhqB and similar proteins; MhqB is a type I extradiol dioxygenase involved in the catabolism of methylhydroquinone, an intermediate in the degradation of fenitrothion. This subfamily contains the C-terminal, catalytic, domain of Burkholderia sp. NF100 MhqB and similar proteins. MhqB is a type I extradiol dioxygenase involved in the catabolism of methylhydroquinone, an intermediate in the degradation of fenitrothion. The purified enzyme has shown extradiol ring cleavage activity toward 3-methylcatechol. Fe2+ was suggested as a cofactor, the same as most other enzymes in the family. Burkholderia sp. NF100 MhqB is encoded on the plasmid pNF1. The type I family of extradiol dioxygenases contains two structurally homologous barrel-shaped domains at the N- and C-terminal. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism.

>cd08352 Glo_EDI_BRP_like_1 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.74  E-value=5.6e-17  Score=119.60  Aligned_cols=120  Identities=24%  Similarity=0.302  Sum_probs=84.5

Q ss_pred             CCceEEEeeeCChhhhHHHHHHhcCCeeeeeeccCC-ccceEEEeccccCCceeEEEEeeecCcc---eeecCcceeEEE
Q 022818          152 EPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPE-YKYTLAMLGYAEEDQTTVLELTYNYGVT---EYTKGNAYAQVA  227 (291)
Q Consensus       152 ~~~~~v~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~l~~~~~~~---~~~~~~~~~hi~  227 (291)
                      .++.|++|.|.|++++.+||+++|||+.......++ ..+. +.+....   ...+++.......   ....+.+..|++
T Consensus         2 ~~~~hi~l~v~d~~~a~~fy~~~lG~~~~~~~~~~~~~~~~-~~~~~~~---~~~i~l~~~~~~~~~~~~~~~~g~~h~~   77 (125)
T cd08352           2 FGIHHVAIICSDYEKSKEFYVEILGFKVIREVYRPERGSYK-LDLLLNG---GYQLELFSFPNPPERPSYPEACGLRHLA   77 (125)
T ss_pred             CccceEEEEcCCHHHHHHHHHHhcCCEEeeeeecCCCCcEE-EEEecCC---CcEEEEEEcCCCCCCCCCCcCCCceEEE
Confidence            368999999999999999999999999875533222 2222 2222111   2344443322111   112345788999


Q ss_pred             EEecchHHhHHHHHHHHHHhCCeeecCCccCCCCCceEEEEECCCCceEEEee
Q 022818          228 ISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVD  280 (291)
Q Consensus       228 ~~v~di~~~~~~l~~~~~~~G~~~~~~~~~~~~~~~~~~~~~DpdG~~iel~~  280 (291)
                      |.|+|++++.+++    +++|+++...+....+ +.+++|++||+||+|||+|
T Consensus        78 ~~v~d~~~~~~~l----~~~G~~~~~~~~~~~~-~~~~~~~~DP~G~~iEl~~  125 (125)
T cd08352          78 FSVEDIEAAVKHL----KAKGVEVEPIRVDEFT-GKRFTFFYDPDGLPLELYE  125 (125)
T ss_pred             EEeCCHHHHHHHH----HHcCCccccccccCCC-ceEEEEEECCCCCEEEecC
Confidence            9999999999999    9999998776544333 4578999999999999976

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>COG3185 4-hydroxyphenylpyruvate dioxygenase and related hemolysins [Amino acid transport and metabolism / General function prediction only]

Probab=99.74  E-value=2.7e-16  Score=129.17  Aligned_cols=229  Identities=17%  Similarity=0.238  Sum_probs=151.5

Q ss_pred             CCCCCcceeeEEEEEEeCCHHHHHHHHHhhcCCEEEEEeecCCCceeEEEEecCCCCcceEEEeeecCCCCcc--cCCCC
Q 022818           15 EWPKKDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSY--DIGTG   92 (291)
Q Consensus        15 ~~~~~~~~~i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~--~~g~~   92 (291)
                      .+| ...+++++|.+.|.|.+.+..-|-..|||....+.....    ...++  .++..+++.-...+....+  .+|++
T Consensus        15 ~~P-~~~~GfeFvEf~~~d~~~~l~~l~~~lGF~~~~~Hrsk~----v~l~r--QGdinlvvn~~~~s~a~~f~~~Hgps   87 (363)
T COG3185          15 ANP-EGTDGFEFVEFAVPDPQEALGALLGQLGFTAVAKHRSKA----VTLYR--QGDINLVVNAEPDSFAAEFLDKHGPS   87 (363)
T ss_pred             cCC-CCCCceeEEEEecCCHHHHHHHHHHHhCccccccccccc----eeEEE--eCCEEEEEcCCCcchhhHHHHhcCCc
Confidence            444 348999999999999954444444559999987655432    22233  2355666544333323333  37889


Q ss_pred             ceEEEEEeCCHHHHHHHHHHcCCeeecCCe-----ecC---CCceEEEEEECCCC--CEE--EEEeC--C--CC---CCC
Q 022818           93 FGHFAIATEDVYKLVENIRAKGGNVTREPG-----PLK---GGTTHIAFVKDPDG--YIF--ELIQR--G--PT---PEP  153 (291)
Q Consensus        93 ~~~i~~~v~d~~~~~~~l~~~G~~~~~~~~-----~~~---~g~~~~~~~~Dp~G--~~i--el~~~--~--~~---~~~  153 (291)
                      .+.++|+|+|...++++..+.|++....+.     +.+   +-....+||.|.+|  ..+  ++...  .  +.   ...
T Consensus        88 ~~a~a~~V~DA~~A~a~A~a~gA~~~~~~~g~~e~~ipai~giggsllyfvd~~~~~siyd~~f~~~~~~~~~~~~g~~~  167 (363)
T COG3185          88 ACAMAFRVDDAEQALARALALGARTIDTEIGAGEVDIPAIRGIGGSLLYFVDRYGGRSIYDVEFEPNGAQGASGGVGLTA  167 (363)
T ss_pred             hheeEEeeCCHHHHHHHHHHcCCccccCCCCCccccccceeccCCcEEEEeccCCCCcccccccccccccccccccCcee
Confidence            999999999999999999999996443322     111   11122488888773  222  12222  1  11   136


Q ss_pred             ceEEEeee--CChhhhHHHHHHhcCCeeeeeeccCCccceEEEeccccCCceeEEEEeeecCcce---------eecCcc
Q 022818          154 LCQVMLRV--GDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTE---------YTKGNA  222 (291)
Q Consensus       154 ~~~v~l~v--~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~---------~~~~~~  222 (291)
                      |+|++..|  ..++.+..||+++|+|+.....+.++..-.+..-...+.  +..+.++.+.+...         ...|.|
T Consensus       168 IDHl~~nv~~~~md~w~~FY~~if~~~~~~~fdi~~p~tgl~Sram~Sp--~G~vrlplN~s~~~~sqi~efl~~y~G~G  245 (363)
T COG3185         168 IDHLTHNVKAGQMDTWVLFYESLFGFREIQYFDIPGPITGLRSRAMVSP--CGKVRLPLNESADDKSQIGEFLREYRGEG  245 (363)
T ss_pred             echhhhhcchhhHHHHHHHHHHHhCccceeeEeccCCcccEEEeeEecC--CCcEEeecccCCCchhHHHHHHHHhCCCc
Confidence            89998777  789999999999999999888776554222222222233  33455554544332         226789


Q ss_pred             eeEEEEEecchHHhHHHHHHHHHHhCCeeecCCc
Q 022818          223 YAQVAISTDDVYKSAEVVNLVTQELGGKITRQPG  256 (291)
Q Consensus       223 ~~hi~~~v~di~~~~~~l~~~~~~~G~~~~~~~~  256 (291)
                      ++||||.++||.++++++    +++|++++..|.
T Consensus       246 IQHIA~~T~dI~~tv~~l----r~rG~~fl~ip~  275 (363)
T COG3185         246 IQHIAFGTDDIYATVAAL----RERGVKFLPIPE  275 (363)
T ss_pred             ceEEEecccHHHHHHHHH----HHcCCccCCCch
Confidence            999999999999999999    999999988774

>TIGR03081 metmalonyl_epim methylmalonyl-CoA epimerase

Probab=99.73  E-value=3.1e-17  Score=121.69  Aligned_cols=119  Identities=30%  Similarity=0.505  Sum_probs=85.8

Q ss_pred             eeEEEEEEeCCHHHHHHHHHhhcCCEEEEEeecCCCceeEEEEecCCCCcceEEEeeecCC-CC---cc--cCCCCceEE
Q 022818           23 RFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYG-VT---SY--DIGTGFGHF   96 (291)
Q Consensus        23 ~i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~---~~--~~g~~~~~i   96 (291)
                      +|+|+.|.|+|++++.+||+++|||+.......++.....+++..++.    .+++..... ..   .+  ..+.+..|+
T Consensus         1 ~i~hv~l~v~D~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~----~i~l~~~~~~~~~~~~~~~~~~~g~~~i   76 (128)
T TIGR03081         1 RIDHVGIAVPDLEEAAKLYEDVLGAHVSHIEEVPEQGVKVVFIALGNT----KVELLEPLGEDSPIAKFLEKNGGGIHHI   76 (128)
T ss_pred             CCCEEEEEeCCHHHHHHHHHHHhCCCCccceeCCCCCcEEEEEecCCE----EEEEEecCCCCChHHHHHhcCCCceEEE
Confidence            579999999999999999999999998765444443445666655432    233332211 11   11  124578899


Q ss_pred             EEEeCCHHHHHHHHHHcCCeeecC-CeecCCCceEEEEE--ECCCCCEEEEEe
Q 022818           97 AIATEDVYKLVENIRAKGGNVTRE-PGPLKGGTTHIAFV--KDPDGYIFELIQ  146 (291)
Q Consensus        97 ~~~v~d~~~~~~~l~~~G~~~~~~-~~~~~~g~~~~~~~--~Dp~G~~iel~~  146 (291)
                      ||.|+|+++++++|.++|+++..+ |....+|... .++  +||||++||+++
T Consensus        77 ~~~v~di~~~~~~l~~~G~~~~~~~~~~~~~g~~~-~~~~~~dp~G~~~E~~~  128 (128)
T TIGR03081        77 AIEVDDIEAALETLKEKGVRLIDEEPRIGAGGKPV-AFLHPKSTGGVLIELEE  128 (128)
T ss_pred             EEEcCCHHHHHHHHHHCCCcccCCCCccCCCCCEE-EEecccccCcEEEEecC
Confidence            999999999999999999998764 5565666543 566  799999999975

Members of this protein family are the enzyme methylmalonyl-CoA epimerase (EC 5.1.99.1), also called methylmalonyl-CoA racemase. This enzyme converts (2R)-methylmalonyl-CoA to (2S)-methylmalonyl-CoA, which is then a substrate for methylmalonyl-CoA mutase (TIGR00642). It is known in bacteria, archaea, and as a mitochondrial protein in animals. It is closely related to lactoylglutathione lyase (TIGR00068), which is also called glyoxylase I, and is also a homodimer.

>cd07256 HPCD_C_class_II C-terminal domain of 3,4-dihydroxyphenylacetate 2,3-dioxygenase (HPCD), which catalyses the second step in the degradation of 4-hydroxyphenylacetate to succinate and pyruvate; belongs to the type I class II family of extradiol dioxygenases

Probab=99.73  E-value=1.5e-16  Score=122.78  Aligned_cols=122  Identities=21%  Similarity=0.229  Sum_probs=79.5

Q ss_pred             CCCceEEEeeeCChhhhHHHHHHhcCCeeeeeeccCCccceEEEeccccCCceeEEEEeeecCcceeecCcceeEEEEEe
Q 022818          151 PEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAIST  230 (291)
Q Consensus       151 ~~~~~~v~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~hi~~~v  230 (291)
                      |.++.|++|.|+|++++++||+++|||++......+++.....++.....  ...+.+..       ..++++.|++|.|
T Consensus         1 ~~~l~Hv~l~V~Dl~~s~~FY~~vLGl~~~~~~~~~~~~~~~~~l~~~~~--~~~i~l~~-------~~~~~~~Hiaf~v   71 (161)
T cd07256           1 PQRLDHFNLRVPDVDAGLAYYRDELGFRVSEYTEDDDGTTWAAWLHRKGG--VHDTALTG-------GNGPRLHHVAFWV   71 (161)
T ss_pred             CceEEEEEEecCCHHHHHHHHHhccCCEEEEEeccCCCcEEEEEEecCCC--cceEEEec-------CCCCceeEEEEEc
Confidence            46799999999999999999999999997654433222222333432221  23333321       1245789999999


Q ss_pred             cchHHhHHHHHHHHHHhCCe--eecCCccCCCCCceEEEEECCCCceEEEeech
Q 022818          231 DDVYKSAEVVNLVTQELGGK--ITRQPGSIPGLNTKITSFVDPDGWKTVLVDNE  282 (291)
Q Consensus       231 ~di~~~~~~l~~~~~~~G~~--~~~~~~~~~~~~~~~~~~~DpdG~~iel~~~~  282 (291)
                      +|.++ ++++.++|+++|+.  +...|......+.+++||+|||||.|||++..
T Consensus        72 ~~~~~-v~~~~~~L~~~G~~~~~~~~p~~~g~~~~~~~y~~DPdG~~iEl~~~~  124 (161)
T cd07256          72 PEPHN-IIRTCDLLAAAGYSDRIERGPGRHGISNAFFLYLRDPDGHRIEIYTGD  124 (161)
T ss_pred             CCHHH-HHHHHHHHHHcCCCcccccCCCccCCCCceEEEEECCCCCeEEEeecC
Confidence            87332 33333444999986  33344443323346799999999999998654

This subfamily contains the C-terminal, catalytic, domain of HPCD. HPCD catalyses the second step in the degradation of 4-hydroxyphenylacetate to succinate and pyruvate. The aromatic ring of 4-hydroxyphenylacetate is opened by this dioxygenase to yield the 3,4-diol product, 2-hydroxy-5-carboxymethylmuconate semialdehyde. HPCD is a homotetramer and each monomer contains two structurally homologous barrel-shaped domains at the N- and C-terminus. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism. Most extradiol dioxygenases contain Fe(II) in their active site, but HPCD can be activated by either Mn(II) or Fe(II). These enzymes belong to the type I class II family of

>cd09011 Glo_EDI_BRP_like_23 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.73  E-value=1.5e-16  Score=116.77  Aligned_cols=114  Identities=18%  Similarity=0.271  Sum_probs=81.5

Q ss_pred             eeeEEEEEEeCCHHHHHHHHHhhcCCEEEEEeecCCCceeEEEEecCCCCcceEEEeee----cCCCCcccCCCCceEEE
Q 022818           22 RRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTY----NYGVTSYDIGTGFGHFA   97 (291)
Q Consensus        22 ~~i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~----~~~~~~~~~g~~~~~i~   97 (291)
                      +++.|+.|.|+|++++++||+++||+++....+  .    ...+. ++    +.+....    .........+.+..|++
T Consensus         1 ~~~~~~~l~v~D~~~a~~FY~~~lG~~~~~~~~--~----~~~~~-~~----~~l~~~~~~~~~~~~~~~~~~~~~~~l~   69 (120)
T cd09011           1 MKFKNPLLVVKDIEKSKKFYEKVLGLKVVMDFG--E----NVTFE-GG----FALQEGYSWLEGISKADIIEKSNNFELY   69 (120)
T ss_pred             CEEEEEEEEECCHHHHHHHHHHhcCCEEeeccC--c----eEEEe-cc----ceeccchhhhccCCcccccccCCceEEE
Confidence            478999999999999999999999999864321  1    11121 11    1111100    01111122334567999


Q ss_pred             EEeCCHHHHHHHHHHcCC-eeecCCeecCCCceEEEEEECCCCCEEEEEeC
Q 022818           98 IATEDVYKLVENIRAKGG-NVTREPGPLKGGTTHIAFVKDPDGYIFELIQR  147 (291)
Q Consensus        98 ~~v~d~~~~~~~l~~~G~-~~~~~~~~~~~g~~~~~~~~Dp~G~~iel~~~  147 (291)
                      |.|+|+++++++|+++|+ ++..+|...++|.+. ++|+|||||+|++.+.
T Consensus        70 ~~v~dvd~~~~~l~~~g~~~~~~~~~~~~~g~r~-~~~~DPdGn~iei~~~  119 (120)
T cd09011          70 FEEEDFDAFLDKLKRYDNIEYVHPIKEHPWGQRV-VRFYDPDKHIIEVGES  119 (120)
T ss_pred             EEehhhHHHHHHHHhcCCcEEecCcccCCCccEE-EEEECCCCCEEEEecc
Confidence            999999999999999986 688888888887765 8999999999999875

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>TIGR03081 metmalonyl_epim methylmalonyl-CoA epimerase

Probab=99.73  E-value=7.7e-17  Score=119.53  Aligned_cols=119  Identities=23%  Similarity=0.337  Sum_probs=85.4

Q ss_pred             CceEEEeeeCChhhhHHHHHHhcCCeeeeeeccCCccceEEEeccccCCceeEEEEeeecCcce------eecCcceeEE
Q 022818          153 PLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTE------YTKGNAYAQV  226 (291)
Q Consensus       153 ~~~~v~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~------~~~~~~~~hi  226 (291)
                      ++.|+.|.|+|++++++||+++|||++.......+......++..+    ...+++....+...      ...+.+..|+
T Consensus         1 ~i~hv~l~v~D~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~----~~~i~l~~~~~~~~~~~~~~~~~~~g~~~i   76 (128)
T TIGR03081         1 RIDHVGIAVPDLEEAAKLYEDVLGAHVSHIEEVPEQGVKVVFIALG----NTKVELLEPLGEDSPIAKFLEKNGGGIHHI   76 (128)
T ss_pred             CCCEEEEEeCCHHHHHHHHHHHhCCCCccceeCCCCCcEEEEEecC----CEEEEEEecCCCCChHHHHHhcCCCceEEE
Confidence            5789999999999999999999999987554333333455555432    24556644322111      0124577899


Q ss_pred             EEEecchHHhHHHHHHHHHHhCCeeecC-CccCCCCCceEEEE--ECCCCceEEEee
Q 022818          227 AISTDDVYKSAEVVNLVTQELGGKITRQ-PGSIPGLNTKITSF--VDPDGWKTVLVD  280 (291)
Q Consensus       227 ~~~v~di~~~~~~l~~~~~~~G~~~~~~-~~~~~~~~~~~~~~--~DpdG~~iel~~  280 (291)
                      +|.|+|+++++++|    +++|+++..+ |...++ +.+..|+  +||||++|||+|
T Consensus        77 ~~~v~di~~~~~~l----~~~G~~~~~~~~~~~~~-g~~~~~~~~~dp~G~~~E~~~  128 (128)
T TIGR03081        77 AIEVDDIEAALETL----KEKGVRLIDEEPRIGAG-GKPVAFLHPKSTGGVLIELEE  128 (128)
T ss_pred             EEEcCCHHHHHHHH----HHCCCcccCCCCccCCC-CCEEEEecccccCcEEEEecC
Confidence            99999999999999    9999998764 444444 4466677  799999999975

Members of this protein family are the enzyme methylmalonyl-CoA epimerase (EC 5.1.99.1), also called methylmalonyl-CoA racemase. This enzyme converts (2R)-methylmalonyl-CoA to (2S)-methylmalonyl-CoA, which is then a substrate for methylmalonyl-CoA mutase (TIGR00642). It is known in bacteria, archaea, and as a mitochondrial protein in animals. It is closely related to lactoylglutathione lyase (TIGR00068), which is also called glyoxylase I, and is also a homodimer.

>cd08360 MhqB_like_C C-terminal domain of Burkholderia sp

Probab=99.73  E-value=2.7e-16  Score=117.68  Aligned_cols=117  Identities=23%  Similarity=0.297  Sum_probs=85.4

Q ss_pred             eeeEEEEEEeCCHHHHHHHHHhhcCCEEEEEeecCCCceeEEEEecCCCCcceEEEeeecCCCCcccCCCCceEEEEEeC
Q 022818           22 RRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIATE  101 (291)
Q Consensus        22 ~~i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~~~~i~~~v~  101 (291)
                      ++++|+.|.|+|++++.+||+++||+++.....  .   ...++..++...+..+.+.....     ...++.|++|.|+
T Consensus         2 ~~l~hi~l~v~dl~~s~~FY~~vlGl~~~~~~~--~---~~~~~~~~~~~~~~~i~l~~~~~-----~~~g~~hiaf~v~   71 (134)
T cd08360           2 RRLGHVVLFVPDVEAAEAFYRDRLGFRVSDRFK--G---RGAFLRAAGGGDHHNLFLIKTPA-----PMAGFHHAAFEVG   71 (134)
T ss_pred             ceeeEEEEEcCCHHHHHHHHHHhcCCEEEEEec--C---cEEEEECCCCCCCcEEEEecCCC-----CCCcceEEEEEeC
Confidence            579999999999999999999999999875532  1   23455543222233444433221     1358999999999


Q ss_pred             CHHHHH---HHHHHcCCeeecCCeecCCCceEEEEEECCCCCEEEEEeCC
Q 022818          102 DVYKLV---ENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRG  148 (291)
Q Consensus       102 d~~~~~---~~l~~~G~~~~~~~~~~~~g~~~~~~~~Dp~G~~iel~~~~  148 (291)
                      |++++.   ++|+++|+++...|...+.+...++||+||+|++|||....
T Consensus        72 d~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~y~~DP~G~~iEl~~~~  121 (134)
T cd08360          72 DIDEVMLGGNHMLRAGYQTGWGPGRHRIGSNYFWYFRDPWGGEVEYGADM  121 (134)
T ss_pred             CHHHHHHHHHHHHHcCCccccCCCCcCCCccEEEEEECCCCCEEEEEccc
Confidence            887665   69999999987666555545455589999999999999654

NF100 MhqB and similar proteins; MhqB is a type I extradiol dioxygenase involved in the catabolism of methylhydroquinone, an intermediate in the degradation of fenitrothion. This subfamily contains the C-terminal, catalytic, domain of Burkholderia sp. NF100 MhqB and similar proteins. MhqB is a type I extradiol dioxygenase involved in the catabolism of methylhydroquinone, an intermediate in the degradation of fenitrothion. The purified enzyme has shown extradiol ring cleavage activity toward 3-methylcatechol. Fe2+ was suggested as a cofactor, the same as most other enzymes in the family. Burkholderia sp. NF100 MhqB is encoded on the plasmid pNF1. The type I family of extradiol dioxygenases contains two structurally homologous barrel-shaped domains at the N- and C-terminal. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism.

>cd07247 SgaA_N_like N-terminal domain of Streptomyces griseus SgaA (suppression of growth disturbance caused by A-factor at a high concentration under high osmolality during early growth phase), and similar domains

Probab=99.73  E-value=1.8e-16  Score=115.20  Aligned_cols=114  Identities=25%  Similarity=0.267  Sum_probs=83.4

Q ss_pred             ceEEEeeeCChhhhHHHHHHhcCCeeeeeeccCCccceEEEeccccCCceeEEEEeeecCcceeecCcceeEEEEEecch
Q 022818          154 LCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDV  233 (291)
Q Consensus       154 ~~~v~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~hi~~~v~di  233 (291)
                      +.|+.|.|+|++++++||+++||+++..... ....+  .++..+.   ...+.+....+..  ..+.+..|++|.|+|+
T Consensus         1 ~~hi~l~v~d~~~s~~FY~~~lG~~~~~~~~-~~~~~--~~~~~~~---~~~~~~~~~~~~~--~~~~~~~~~~f~v~di   72 (114)
T cd07247           1 PVWFELPTTDPERAKAFYGAVFGWTFEDMGD-GGGDY--AVFSTGG---GAVGGLMKAPEPA--AGSPPGWLVYFAVDDV   72 (114)
T ss_pred             CEEEEeeCCCHHHHHHHHHhccCceeeeccC-CCCce--EEEEeCC---ccEEEEecCCCCC--CCCCCeEEEEEEeCCH
Confidence            4799999999999999999999999765443 22223  3333222   1222222222111  1234668999999999


Q ss_pred             HHhHHHHHHHHHHhCCeeecCCccCCCCCceEEEEECCCCceEEEee
Q 022818          234 YKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVD  280 (291)
Q Consensus       234 ~~~~~~l~~~~~~~G~~~~~~~~~~~~~~~~~~~~~DpdG~~iel~~  280 (291)
                      +++.++|    +++|+++..+|...++ +++.+|++|||||.|+|+|
T Consensus        73 ~~~~~~l----~~~g~~~~~~~~~~~~-~~~~~~~~DPdG~~~~l~~  114 (114)
T cd07247          73 DAAAARV----EAAGGKVLVPPTDIPG-VGRFAVFADPEGAVFGLWQ  114 (114)
T ss_pred             HHHHHHH----HHCCCEEEeCCcccCC-cEEEEEEECCCCCEEEeEC
Confidence            9999999    9999999988887775 4589999999999999975

SgaA suppresses the growth disturbances caused by high osmolarity and a high concentration of A-factor, a microbial hormone, during the early growth phase in Streptomyces griseus. A-factor (2-isocapryloyl-3R-hydroxymethyl-gamma-butyrolactone) controls morphological differentiation and secondary metabolism in Streptomyces griseus. It is a chemical signaling molecule that at a very low concentration acts as a switch for yellow pigment production, aerial mycelium formation, streptomycin production, and streptomycin resistance. The structure and amino acid sequence of SgaA are closely related to a group of antibiotics resistance proteins, including bleomycin resistance protein, mitomycin resistance protein, and fosfomycin resistance proteins. SgaA might also function as a strep

>cd07237 BphC1-RGP6_C_like C-terminal domain of 2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC, EC 1

Probab=99.72  E-value=2.6e-16  Score=120.49  Aligned_cols=122  Identities=16%  Similarity=0.176  Sum_probs=87.4

Q ss_pred             CCCCceEEEeeeCChhhhHHHHHHhcCCeeeeeeccC---CccceEEEeccccCCceeEEEEeeecCcceeecCcceeEE
Q 022818          150 TPEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKP---EYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQV  226 (291)
Q Consensus       150 ~~~~~~~v~l~v~d~~~~~~fy~~~lG~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~hi  226 (291)
                      .++++.|+.|.|+|++++.+||+++|||++.......   +....+.++..+..  +..+.+...      ..++++.|+
T Consensus         6 ~~~~l~Hi~l~v~Dl~~a~~FY~~~LGl~~~~~~~~~~~~~~~~~~~~l~~~~~--~~~i~~~~~------~~~~g~~Hi   77 (154)
T cd07237           6 GDQGLGHVVLATPDPDEAHAFYRDVLGFRLSDEIDIPLPPGPTARVTFLHCNGR--HHSLALAEG------PGPKRIHHL   77 (154)
T ss_pred             CCCccCEEEEEeCCHHHHHHHHHHccCCEEEEEEcccCCCCCcceEEEEEeCCC--CCCEEEEcC------CCCceeEEE
Confidence            3578999999999999999999999999976543221   11234555553222  233443221      123578999


Q ss_pred             EEEecchH---HhHHHHHHHHHHhCCeeecCCccCCCCCceEEEEECCCCceEEEeechh
Q 022818          227 AISTDDVY---KSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNED  283 (291)
Q Consensus       227 ~~~v~di~---~~~~~l~~~~~~~G~~~~~~~~~~~~~~~~~~~~~DpdG~~iel~~~~~  283 (291)
                      +|.|+|++   ++.++|    +++|+++..+|...+..+.+.+|++||+||+|||.....
T Consensus        78 af~V~d~~~l~~~~~~L----~~~G~~v~~~~~~~~~~~~~~~y~~DPdG~~iEl~~~~~  133 (154)
T cd07237          78 MLEVTSLDDVGRAYDRV----RARGIPIAMTLGRHTNDRMLSFYVRTPSGFAIEYGWGGR  133 (154)
T ss_pred             EEEcCCHHHHHHHHHHH----HHcCCceeccCCccCCCCcEEEEEECCCCcEEEeccCce
Confidence            99998754   356666    999999988887766555688999999999999986643

13.11.39) 1 from Rhodococcus globerulus P6 (BphC1-RGP6) and similar proteins. This subfamily contains the C-terminal, catalytic, domain of BphC1-RGP6 and similar proteins. BphC catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). This subfamily of BphCs belongs to the type I extradiol dioxygenase family, which require a metal in the active site in its catalytic mechanism. Polychlorinated biphenyl degrading bacteria demonstrate a multiplicity of BphCs. For example, three types of BphC enzymes have been found in Rhodococcus globerulus (BphC1-RGP6 - BphC3-RGP6), all three enzymes are type I extradiol dioxygenases. BphC1-RGP6 has an internal duplication, it is a two-domain dioxygenase which forms octamers, and has Fe(II) at the catalytic site. Its C-terminal repeat is represented in thi

>cd07265 2_3_CTD_N N-terminal domain of catechol 2,3-dioxygenase

Probab=99.72  E-value=1.9e-16  Score=116.55  Aligned_cols=116  Identities=22%  Similarity=0.186  Sum_probs=80.4

Q ss_pred             CCCceEEEeeeCChhhhHHHHHHhcCCeeeeeeccCCccceEEEeccccCCceeEEEEeeecCcceeecCcceeEEEEEe
Q 022818          151 PEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAIST  230 (291)
Q Consensus       151 ~~~~~~v~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~hi~~~v  230 (291)
                      ..++.|+.|.|+|++++.+||+++|||++.....  +.  ..+ +..........+.+..       ...++..|++|.|
T Consensus         2 ~~~l~hv~l~v~Dl~~s~~FY~~~lG~~~~~~~~--~~--~~~-~~~~~~~~~~~~~l~~-------~~~~~~~hiaf~v   69 (122)
T cd07265           2 VLRPGHVQLRVLDLEEAIKHYREVLGLDEVGRDD--QG--RVY-LKAWDEFDHHSIVLRE-------ADTAGLDFMGFKV   69 (122)
T ss_pred             cceEeEEEEEeCCHHHHHHHHHhccCCEeeeecC--Cc--eEE-EEccCCCcccEEEecc-------CCCCCeeEEEEEe
Confidence            3578999999999999999999999999765431  11  222 2211111233344421       1234678999999


Q ss_pred             c---chHHhHHHHHHHHHHhCCeeecCCccCCCCCceEEEEECCCCceEEEeech
Q 022818          231 D---DVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNE  282 (291)
Q Consensus       231 ~---di~~~~~~l~~~~~~~G~~~~~~~~~~~~~~~~~~~~~DpdG~~iel~~~~  282 (291)
                      +   |++++.++|    +++|+++...|.....+.++.+||+|||||+|||.+..
T Consensus        70 ~~~~dv~~~~~~l----~~~G~~~~~~~~~~~~~~~~~~~~~DPdG~~iE~~~~~  120 (122)
T cd07265          70 LDDADLEKLEARL----QAYGVAVERIPAGELPGVGRRVRFQLPSGHTMELYADK  120 (122)
T ss_pred             CCHHHHHHHHHHH----HHCCCcEEEcccCCCCCCceEEEEECCCCCEEEEEEec
Confidence            8   566666677    99999987766443332347899999999999998754

This subfamily contains the N-terminal, non-catalytic, domain of catechol 2,3-dioxygenase. Catechol 2,3-dioxygenase (2,3-CTD, catechol:oxygen 2,3-oxidoreductase) catalyzes an extradiol cleavage of catechol to form 2-hydroxymuconate semialdehyde with the insertion of two atoms of oxygen. The enzyme is a homotetramer and contains catalytically essential Fe(II) . The reaction proceeds by an ordered bi-unit mechanism. First, catechol binds to the enzyme, this is then followed by the binding of dioxygen to form a tertiary complex, and then the aromatic ring is cleaved to produce 2-hydroxymuconate semialdehyde. Catechol 2,3-dioxygenase belongs to the type I extradiol dioxygenase family. The subunit comprises the N- and C-terminal domains of similar structure fold, resulting from an ancient gene duplication. The active site is located in a funnel-shaped space of the C-terminal domain. This subfamily represents the N-terminal do

>PF00903 Glyoxalase: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily This Prosite is specific to glyoxalases This Prosite is specific to Extradiol ring-cleavage dioxygenases This prints entry is specific to bleomycin resistance protein

Probab=99.72  E-value=8.5e-17  Score=119.02  Aligned_cols=120  Identities=28%  Similarity=0.437  Sum_probs=84.7

Q ss_pred             eeEEEEEEeCCHHHHHHHHHhhcCCEEEEEeec--CCCceeEEEEecCCCCcceEEEeeecCCCCcccC---CCCceEEE
Q 022818           23 RFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDV--PEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDI---GTGFGHFA   97 (291)
Q Consensus        23 ~i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~---g~~~~~i~   97 (291)
                      +|+||+|.|+|++++++||+++|||++......  ........++..+..  .+.+.............   +.+..|++
T Consensus         1 ~l~Hi~i~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~l~~~~~~~~~~~~~~~~~~~~~~i~   78 (128)
T PF00903_consen    1 GLDHIAIRVKDLEKAIDFYTDVLGFRLVEESDNDGEGGDLRIAFLRIGEG--HIELFLNPSPPPRASGHSFPEHGGHHIA   78 (128)
T ss_dssp             EEEEEEEEESCHHHHHHHHHHTTTSEEEEEEEEESTTEEEEEEEEESTSS--CEEEEEEESSSSSSEEEHHHSHTSEEEE
T ss_pred             CeEEEEEEcCCHHHHHHHHHHHhCCcEEeeeccccccccccceeeccccc--ceeeeeeccccccccccccccccceeEE
Confidence            689999999999999999999999999987662  222334455554433  33333322222211111   01445666


Q ss_pred             EEe---CCHHHHHHHHHHcCCeeecCCeecCCCceEEEEEECCCCCEEEE
Q 022818           98 IAT---EDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFEL  144 (291)
Q Consensus        98 ~~v---~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~Dp~G~~iel  144 (291)
                      +.+   +|+++++++|+++|+++..+|....++...++|++||+|+.|||
T Consensus        79 ~~~~~~~dl~~~~~~l~~~g~~~~~~~~~~~~~~~~~~y~~Dp~G~~iE~  128 (128)
T PF00903_consen   79 FLAFDVDDLDAAYERLKAQGVEIVEEPDRYYFGSGYSFYFRDPDGNLIEF  128 (128)
T ss_dssp             EEESSHHHHHHHHHHHHHTTGEEEEEEEEHSTTCEEEEEEEETTSEEEEE
T ss_pred             EEeccHHHHHHHHHHHhhcCccEEecCCCCCCCCEEEEEEECCCCCEEEC
Confidence            665   57888999999999999988877777777656899999999997

; InterPro: IPR004360 Glyoxalase I (4.4.1.5 from EC) (lactoylglutathione lyase) catalyzes the first step of the glyoxal pathway. S-lactoylglutathione is then converted by glyoxalase II to lactic acid []. Glyoxalase I is an ubiquitous enzyme which binds one mole of zinc per subunit. The bacterial and yeast enzymes are monomeric while the mammalian one is homodimeric. The sequence of glyoxalase I is well conserved. The domain represented by this entry is found in glyoxalase I and in other related proteins, including fosfomycin resistance proteins FosB [], FosA [], FosX [] and dioxygenases (eg. 4-hydroxyphenylpyruvate dioxygenase).; PDB: 1CJX_A 1NPB_E 3OJT_C 3OJN_A 2IG9_B 3OJJ_B 3OJK_D 1Q0C_D 1F1X_C 3BZA_B ....

>cd07258 PpCmtC_C C-terminal domain of 2,3-dihydroxy-p-cumate-3,4-dioxygenase (PpCmtC)

Probab=99.71  E-value=2.6e-16  Score=118.41  Aligned_cols=113  Identities=13%  Similarity=0.222  Sum_probs=82.0

Q ss_pred             eEEEeeeCChhhhHHHHHHhcCCeeeeeeccCCccceEEEeccccCCceeEEEEeeecCcceeecCcceeEEEEEecchH
Q 022818          155 CQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDVY  234 (291)
Q Consensus       155 ~~v~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~hi~~~v~di~  234 (291)
                      .||.|.|+|++++.+||+++|||++..+...     ..+++.......+..+.+..       ....++.|++|.|+|++
T Consensus         1 ~Hv~l~V~Dle~s~~Fy~~vLG~~~~~~~~~-----~~~~l~~~~~~~~h~~~~~~-------~~~~gl~Hiaf~v~~~~   68 (141)
T cd07258           1 GHVVIGSENFEASRDSLVEDFGFRVSDLIED-----RIVFMRCHPNPFHHTFAVGP-------ASSSHFHHVNFMVTDID   68 (141)
T ss_pred             CcEEEecCCHHHHHHHHHhcCCCEeeeeeCC-----EEEEEEcCCCCCcceeeecc-------CCCCceEEEEEECCCHH
Confidence            4899999999999999999999998766421     23445432222233333211       13458999999998744


Q ss_pred             ---HhHHHHHHHHHHhCCeeecCCccCCCCCceEEEEECCCCceEEEeechh
Q 022818          235 ---KSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNED  283 (291)
Q Consensus       235 ---~~~~~l~~~~~~~G~~~~~~~~~~~~~~~~~~~~~DpdG~~iel~~~~~  283 (291)
                         +++++|    +++|+++...|...+..+.+++||+||+|+.|||+....
T Consensus        69 ~v~~~~~~l----~~~G~~~~~~p~~~~~~~~~~~y~~DPdG~~iE~~~~~~  116 (141)
T cd07258          69 DIGKALYRI----KAHDVKVVFGPGRHPPSDSIFFYFLDPDGITVEYSFGME  116 (141)
T ss_pred             HHHHHHHHH----HHCCCcEEeCCceECCCCCEEEEEECCCCCEEEEEeCcc
Confidence               445555    999999988888766555688999999999999986543

This subfamily contains the C-terminal, catalytic, domain of PpCmtC. 2,3-dihydroxy-p-cumate-3,4-dioxygenase (CmtC of Pseudomonas putida F1) is a dioxygenase involved in the eight-step catabolism pathway of p-cymene. CmtC acts upon the reaction intermediate 2,3-dihydroxy-p-cumate, yielding 2-hydroxy-3-carboxy-6-oxo-7-methylocta-2,4-dienoate. The CmtC belongs to the type I family of extradiol dioxygenases. Fe2+ was suggested as a cofactor, same as for other enzymes in the family. The type I family of extradiol dioxygenases contains two structurally homologous barrel-shaped domains at the N- and C-terminal. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism.

>cd07237 BphC1-RGP6_C_like C-terminal domain of 2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC, EC 1

Probab=99.71  E-value=7e-16  Score=118.12  Aligned_cols=122  Identities=20%  Similarity=0.319  Sum_probs=87.6

Q ss_pred             CcceeeEEEEEEeCCHHHHHHHHHhhcCCEEEEEeecC---CCceeEEEEecCCCCcceEEEeeecCCCCcccCCCCceE
Q 022818           19 KDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVP---EEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGH   95 (291)
Q Consensus        19 ~~~~~i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~~~~   95 (291)
                      +.-++|+||.|.|+|++++.+||+++||+++.......   +......++..++.  +..+.+....      .+.++.|
T Consensus         5 ~~~~~l~Hi~l~v~Dl~~a~~FY~~~LGl~~~~~~~~~~~~~~~~~~~~l~~~~~--~~~i~~~~~~------~~~g~~H   76 (154)
T cd07237           5 TGDQGLGHVVLATPDPDEAHAFYRDVLGFRLSDEIDIPLPPGPTARVTFLHCNGR--HHSLALAEGP------GPKRIHH   76 (154)
T ss_pred             cCCCccCEEEEEeCCHHHHHHHHHHccCCEEEEEEcccCCCCCcceEEEEEeCCC--CCCEEEEcCC------CCceeEE
Confidence            34678999999999999999999999999986643321   11234555655332  2223332211      1347899


Q ss_pred             EEEEeCCHH---HHHHHHHHcCCeeecCCeecCCCceEEEEEECCCCCEEEEEeCC
Q 022818           96 FAIATEDVY---KLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRG  148 (291)
Q Consensus        96 i~~~v~d~~---~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~Dp~G~~iel~~~~  148 (291)
                      ++|.|+|.+   +++++|+++|+++...+...+.+....+|++||+|+.|||....
T Consensus        77 iaf~V~d~~~l~~~~~~L~~~G~~v~~~~~~~~~~~~~~~y~~DPdG~~iEl~~~~  132 (154)
T cd07237          77 LMLEVTSLDDVGRAYDRVRARGIPIAMTLGRHTNDRMLSFYVRTPSGFAIEYGWGG  132 (154)
T ss_pred             EEEEcCCHHHHHHHHHHHHHcCCceeccCCccCCCCcEEEEEECCCCcEEEeccCc
Confidence            999998754   68999999999988776655554445599999999999998765

13.11.39) 1 from Rhodococcus globerulus P6 (BphC1-RGP6) and similar proteins. This subfamily contains the C-terminal, catalytic, domain of BphC1-RGP6 and similar proteins. BphC catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). This subfamily of BphCs belongs to the type I extradiol dioxygenase family, which require a metal in the active site in its catalytic mechanism. Polychlorinated biphenyl degrading bacteria demonstrate a multiplicity of BphCs. For example, three types of BphC enzymes have been found in Rhodococcus globerulus (BphC1-RGP6 - BphC3-RGP6), all three enzymes are type I extradiol dioxygenases. BphC1-RGP6 has an internal duplication, it is a two-domain dioxygenase which forms octamers, and has Fe(II) at the catalytic site. Its C-terminal repeat is represented in thi

>cd09014 BphC-JF8_C_like C-terminal, catalytic, domain of BphC_JF8, (2,3-dihydroxybiphenyl 1,2-dioxygenase) from Bacillus sp

Probab=99.71  E-value=9e-16  Score=118.92  Aligned_cols=124  Identities=22%  Similarity=0.291  Sum_probs=86.8

Q ss_pred             CcceeeEEEEEEeCCHHHHHHHHHhhcCCEEEEEeecCCCceeEEEEecCCCCcceEEEeeecCCCCcccCCCCceEEEE
Q 022818           19 KDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAI   98 (291)
Q Consensus        19 ~~~~~i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~~~~i~~   98 (291)
                      +.+.+|+|++|.|+|++++.+||+++|||++........+.....++...+...  .+.+.....    ....++.|+||
T Consensus         2 ~~i~~i~Hi~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~~~~~~--~i~l~~~~~----~~~~~~~hiaf   75 (166)
T cd09014           2 VGVRRLDHVNLLASDVDANRDFMEEVLGFRLREQIRLDNGKEAGAWMSVSNKVH--DVAYTRDPA----GARGRLHHLAY   75 (166)
T ss_pred             CCcceeeeEEEEcCCHHHHHHHHHHccCCEEEEEEecCCCceEEEEEeCCCCce--eEEEecCCC----CCCCCceEEEE
Confidence            458899999999999999999999999999876543332222345555432222  222222111    11236789999


Q ss_pred             EeCC---HHHHHHHHHHcCCeeecCCeecCCCceEEEEEECCCCCEEEEEeCC
Q 022818           99 ATED---VYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRG  148 (291)
Q Consensus        99 ~v~d---~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~Dp~G~~iel~~~~  148 (291)
                      .|+|   +++++++|+++|+++...|.....+...++|++||+||+||+....
T Consensus        76 ~v~~~~~l~~~~~~l~~~Gv~i~~~p~~~~~~~~~~~y~~DPdG~~iEl~~~~  128 (166)
T cd09014          76 ALDTREDVLRAADIFLENGIFIEAGPGKHGIQQTFFLYVYEPGGNRVELFGGG  128 (166)
T ss_pred             ECCCHHHHHHHHHHHHHcCCccccCCcccCCCCceEEEEECCCCCEEEEEEcC
Confidence            9986   5578899999999987666554443444588999999999999873

JF8 and similar proteins. 2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC) catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, a key step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). BphC belongs to the type I extradiol dioxygenase family, which requires a metal ion in the active site in its catalytic mechanism. Polychlorinated biphenyl degrading bacteria demonstrate a multiplicity of BphCs. This subfamily of BphC is represented by the enzyme purified from the thermophilic biphenyl and naphthalene degrader, Bacillus sp. JF8. The members in this family of BphC enzymes may use either Mn(II) or Fe(II) as cofactors. The enzyme purified from Bacillus sp. JF8 is Mn(II)-dependent, however, the enzyme from Rhodococcus jostii RHAI has Fe(II) bound to it. BphC_JF8 is thermostable and its optimum activity is at 85 degrees C. Th

>cd08361 PpCmtC_N N-terminal domain of 2,3-dihydroxy-p-cumate-3,4-dioxygenase (PpCmtC)

Probab=99.71  E-value=3.5e-16  Score=115.38  Aligned_cols=114  Identities=13%  Similarity=0.179  Sum_probs=83.1

Q ss_pred             CcceeeEEEEEEeCCHHHHHHHHHhhcCCEEEEEeecCCCceeEEEEecCCCCcceEEEeeecCCCCcccCCCCceEEEE
Q 022818           19 KDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAI   98 (291)
Q Consensus        19 ~~~~~i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~~~~i~~   98 (291)
                      .++.+|.|+.|.|+|++++.+||+++|||++..+..      ...++..++.  +..+.+....        ++..|++|
T Consensus         2 ~~~~~l~~v~l~v~d~~~s~~FY~~vLG~~~~~~~~------~~~~l~~~~~--~~~i~l~~~~--------~~~~~iaf   65 (124)
T cd08361           2 IELQDIAYVRLGTRDLAGATRFATDILGLQVAERTA------KATYFRSDAR--DHTLVYIEGD--------PAEQASGF   65 (124)
T ss_pred             ceEEEeeEEEEeeCCHHHHHHHHHhccCceeccCCC------CeEEEEcCCc--cEEEEEEeCC--------CceEEEEE
Confidence            468999999999999999999999999999865422      1345654432  2223333211        25678999


Q ss_pred             EeCC---HHHHHHHHHHcCCeeecCCeec--CCCceEEEEEECCCCCEEEEEeCC
Q 022818           99 ATED---VYKLVENIRAKGGNVTREPGPL--KGGTTHIAFVKDPDGYIFELIQRG  148 (291)
Q Consensus        99 ~v~d---~~~~~~~l~~~G~~~~~~~~~~--~~g~~~~~~~~Dp~G~~iel~~~~  148 (291)
                      +|++   +++++++|+++|+++...+...  ..+...+++|+|||||.||+....
T Consensus        66 ~v~~~~dv~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~f~DPdG~~iE~~~~~  120 (124)
T cd08361          66 ELRDDDALESAATELEQYGHEVRRGTAEECELRKVKAFIAFRDPSGNSIELVVRP  120 (124)
T ss_pred             EECCHHHHHHHHHHHHHcCCceEEcCHHHhhcCCcceEEEEECcCCCEEEEEEee
Confidence            9975   9999999999999876654321  123344589999999999998654

This subfamily contains the N-terminal, non-catalytic, domain of PpCmtC. 2,3-dihydroxy-p-cumate-3,4-dioxygenase (CmtC of Pseudomonas putida F1) is a dioxygenase involved in the eight-step catabolism pathway of p-cymene. CmtC acts upon the reaction intermediate 2,3-dihydroxy-p-cumate, yielding 2-hydroxy-3-carboxy-6-oxo-7-methylocta-2,4-dienoate. The CmtC belongs to the type I family of extradiol dioxygenases. Fe2+ was suggested as a cofactor, same as other enzymes in the family. The type I family of extradiol dioxygenases contains two structurally homologous barrel-shaped domains at the N- and C-terminal. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism.

>PRK06724 hypothetical protein; Provisional

Probab=99.70  E-value=7.3e-16  Score=113.93  Aligned_cols=114  Identities=18%  Similarity=0.221  Sum_probs=78.4

Q ss_pred             CcceeeEEEEEEeCCHHHHHHHHHhhc---CCEEEEEeecCCCceeEEEEecCCCCcceEEEeeecCCCCcccCCCCceE
Q 022818           19 KDKRRFLHAVYRVGDLDRTIKFYTECF---GMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGH   95 (291)
Q Consensus        19 ~~~~~i~hv~l~v~d~~~~~~FY~~~l---G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~~~~   95 (291)
                      .|+.+|+||.|.|+|+++|++||+++|   |++.........+            ...+  .+......  .....+..|
T Consensus         3 ~~~~~i~Hv~l~V~Dle~s~~FY~~vlg~lg~~~~~~~~~~~g------------~~~l--~l~~~~~~--~~~~~g~~h   66 (128)
T PRK06724          3 TLRAGIHHIEFWVANLEESISFYDMLFSIIGWRKLNEVAYSTG------------ESEI--YFKEVDEE--IVRTLGPRH   66 (128)
T ss_pred             ccCcccCEEEEEeCCHHHHHHHHHHHHhhCCcEEeeeEeeeCC------------CeeE--EEecCCcc--ccCCCCcee
Confidence            467899999999999999999999966   6665321111111            1111  11111110  012346789


Q ss_pred             EEEEe---CCHHHHHHHHHHcCCeeecCCeecCC--CceEEEEEECCCCCEEEEEeCC
Q 022818           96 FAIAT---EDVYKLVENIRAKGGNVTREPGPLKG--GTTHIAFVKDPDGYIFELIQRG  148 (291)
Q Consensus        96 i~~~v---~d~~~~~~~l~~~G~~~~~~~~~~~~--g~~~~~~~~Dp~G~~iel~~~~  148 (291)
                      +||.|   +++++++++|+++|+++...|...+.  ++.+.++|+|||||.||+....
T Consensus        67 ~af~v~~~~dvd~~~~~l~~~G~~~~~~p~~~~~~~~g~~~~~f~DPdG~~iEl~~~~  124 (128)
T PRK06724         67 ICYQAINRKVVDEVAEFLSSTKIKIIRGPMEMNHYSEGYYTIDFYDPNGFIIEVAYTP  124 (128)
T ss_pred             EEEecCChHHHHHHHHHHHHCCCEEecCCcccCCCCCCEEEEEEECCCCCEEEEEeCC
Confidence            99998   78999999999999998877765431  2334588999999999998774

>cd09013 BphC-JF8_N_like N-terminal, non-catalytic, domain of BphC_JF8, (2,3-dihydroxybiphenyl 1,2-dioxygenase) from Bacillus sp

Probab=99.70  E-value=7.5e-16  Score=113.16  Aligned_cols=115  Identities=20%  Similarity=0.279  Sum_probs=81.8

Q ss_pred             CcceeeEEEEEEeCCHHHHHHHHHhhcCCEEEEEeecCCCceeEEEEecCCCCcceEEEeeecCCCCcccCCCCceEEEE
Q 022818           19 KDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAI   98 (291)
Q Consensus        19 ~~~~~i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~~~~i~~   98 (291)
                      +.+++|+|+.|.|+|++++.+||+++||+++..+.+      ..+++...+......+.+...       ...++.|++|
T Consensus         2 ~~i~~i~hv~l~v~dl~~a~~FY~~~lG~~~~~~~~------~~~~l~~~~~~~~~~~~l~~~-------~~~~~~h~af   68 (121)
T cd09013           2 FDIAHLAHVELLTPKPEESLWFFTDVLGLEETGREG------QSVYLRAWGDYEHHSLKLTES-------PEAGLGHIAW   68 (121)
T ss_pred             CCccEeeEEEEEeCCHHHHHHHHHhCcCCEEEeecC------CeEEEEeccCCCccEEEEeeC-------CCCceEEEEE
Confidence            358899999999999999999999999999876532      134454322212233333322       1247889999


Q ss_pred             EeC---CHHHHHHHHHHcCCeeecCCeecCCCceEEEEEECCCCCEEEEEeCC
Q 022818           99 ATE---DVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRG  148 (291)
Q Consensus        99 ~v~---d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~Dp~G~~iel~~~~  148 (291)
                      .|+   ++++++++++++|+++...+.....+ . .+||+||+||.+|+....
T Consensus        69 ~v~~~~~v~~~~~~l~~~G~~~~~~~~~~~~~-~-~~~~~DPdG~~iEl~~~~  119 (121)
T cd09013          69 RASSPEALERRVAALEASGLGIGWIEGDPGHG-K-AYRFRSPDGHPMELYWEV  119 (121)
T ss_pred             EcCCHHHHHHHHHHHHHcCCccccccCCCCCc-c-eEEEECCCCCEEEEEEec
Confidence            996   58899999999999874432222222 2 489999999999998643

JF8 and similar proteins. 2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC) catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, a key step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). BphC belongs to the type I extradiol dioxygenase family, which requires a metal ion in the active site in its catalytic mechanism. Polychlorinated biphenyl degrading bacteria demonstrate a multiplicity of BphCs. This subfamily of BphC is represented by the enzyme purified from the thermophilic biphenyl and naphthalene degrader, Bacillus sp. JF8. The members in this family of BphC enzymes may use either Mn(II) or Fe(II) as cofactors. The enzyme purified from Bacillus sp. JF8 is Mn(II)-dependent, however, the enzyme from Rhodococcus jostii RHAI has Fe(II) bound to it. BphC_JF8 is thermostable and its optimum activity is at 85 degrees C

>cd07247 SgaA_N_like N-terminal domain of Streptomyces griseus SgaA (suppression of growth disturbance caused by A-factor at a high concentration under high osmolality during early growth phase), and similar domains

Probab=99.70  E-value=7.6e-16  Score=111.83  Aligned_cols=114  Identities=24%  Similarity=0.233  Sum_probs=82.4

Q ss_pred             eEEEEEEeCCHHHHHHHHHhhcCCEEEEEeecCCCceeEEEEecCCCCcceEEEeeecCCCCcccCCCCceEEEEEeCCH
Q 022818           24 FLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIATEDV  103 (291)
Q Consensus        24 i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~~~~i~~~v~d~  103 (291)
                      +.|+.|.|+|++++++||+++||+++..... ...  ...++..++.   ..+.+.......  .......|++|.|+|+
T Consensus         1 ~~hi~l~v~d~~~s~~FY~~~lG~~~~~~~~-~~~--~~~~~~~~~~---~~~~~~~~~~~~--~~~~~~~~~~f~v~di   72 (114)
T cd07247           1 PVWFELPTTDPERAKAFYGAVFGWTFEDMGD-GGG--DYAVFSTGGG---AVGGLMKAPEPA--AGSPPGWLVYFAVDDV   72 (114)
T ss_pred             CEEEEeeCCCHHHHHHHHHhccCceeeeccC-CCC--ceEEEEeCCc---cEEEEecCCCCC--CCCCCeEEEEEEeCCH
Confidence            4799999999999999999999999865442 112  2334444321   112222221111  1233567899999999


Q ss_pred             HHHHHHHHHcCCeeecCCeecCCCceEEEEEECCCCCEEEEEe
Q 022818          104 YKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQ  146 (291)
Q Consensus       104 ~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~Dp~G~~iel~~  146 (291)
                      ++++++|+++|+++..+|...+++.. .++++||+||.|+|++
T Consensus        73 ~~~~~~l~~~g~~~~~~~~~~~~~~~-~~~~~DPdG~~~~l~~  114 (114)
T cd07247          73 DAAAARVEAAGGKVLVPPTDIPGVGR-FAVFADPEGAVFGLWQ  114 (114)
T ss_pred             HHHHHHHHHCCCEEEeCCcccCCcEE-EEEEECCCCCEEEeEC
Confidence            99999999999999888877765544 5999999999999975

SgaA suppresses the growth disturbances caused by high osmolarity and a high concentration of A-factor, a microbial hormone, during the early growth phase in Streptomyces griseus. A-factor (2-isocapryloyl-3R-hydroxymethyl-gamma-butyrolactone) controls morphological differentiation and secondary metabolism in Streptomyces griseus. It is a chemical signaling molecule that at a very low concentration acts as a switch for yellow pigment production, aerial mycelium formation, streptomycin production, and streptomycin resistance. The structure and amino acid sequence of SgaA are closely related to a group of antibiotics resistance proteins, including bleomycin resistance protein, mitomycin resistance protein, and fosfomycin resistance proteins. SgaA might also function as a strep

>cd07263 Glo_EDI_BRP_like_16 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.70  E-value=3.3e-16  Score=114.38  Aligned_cols=117  Identities=23%  Similarity=0.327  Sum_probs=84.5

Q ss_pred             EEEeeeCChhhhHHHHHHhcCCeeeeeeccCCccceEEEeccccCCceeEEEEeeecCcce--eecCcceeEEEEEecch
Q 022818          156 QVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTE--YTKGNAYAQVAISTDDV  233 (291)
Q Consensus       156 ~v~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~--~~~~~~~~hi~~~v~di  233 (291)
                      ||.|.|.|++++.+||+++|||++.......+ +..++.+..... ....+.+........  ...+.+..|++|.|+|+
T Consensus         1 Hv~l~v~d~~~~~~fY~~~lG~~~~~~~~~~~-~~~~~~~~~~~~-~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~di   78 (119)
T cd07263           1 LVSLYVDDQDKALAFYTEKLGFEVREDVPMGG-GFRWVTVAPPGS-PETSLVLAPPANPAAMSGLQPGGTPGLVLATDDI   78 (119)
T ss_pred             CceEEeCCHHHHHHHHHhccCeEEEEeeccCC-CcEEEEEeCCCC-CeeEEEEeCCCCccccccccCCCceEEEEEehHH
Confidence            78999999999999999999999887654222 234444442221 134455443322211  12345778999999999


Q ss_pred             HHhHHHHHHHHHHhCCeeecCCccCCCCCceEEEEECCCCceEEEee
Q 022818          234 YKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVD  280 (291)
Q Consensus       234 ~~~~~~l~~~~~~~G~~~~~~~~~~~~~~~~~~~~~DpdG~~iel~~  280 (291)
                      +++.+++    +++|+++..+|...++  ++.+|++||+||+|||+|
T Consensus        79 ~~~~~~l----~~~g~~~~~~~~~~~~--~~~~~~~DP~G~~ie~~~  119 (119)
T cd07263          79 DATYEEL----KARGVEFSEEPREMPY--GTVAVFRDPDGNLFVLVQ  119 (119)
T ss_pred             HHHHHHH----HhCCCEEeeccccCCC--ceEEEEECCCCCEEEEeC
Confidence            9999999    9999999988844433  589999999999999975

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>PRK04101 fosfomycin resistance protein FosB; Provisional

Probab=99.70  E-value=4.8e-16  Score=117.03  Aligned_cols=117  Identities=24%  Similarity=0.294  Sum_probs=84.4

Q ss_pred             CCceEEEeeeCChhhhHHHHHHhcCCeeeeeeccCCccceEEEeccccCCceeEEEEeeecCcceeecCcceeEEEEEec
Q 022818          152 EPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTD  231 (291)
Q Consensus       152 ~~~~~v~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~hi~~~v~  231 (291)
                      .++.|+.|.|+|++++.+||+++||+++.....      ...++..+    +..+.+......+....+.++.|++|.++
T Consensus         3 ~~i~hi~L~v~Dl~~s~~FY~~~lG~~~~~~~~------~~~~~~~~----g~~l~l~~~~~~~~~~~~~~~~hiaf~v~   72 (139)
T PRK04101          3 KGINHICFSVSNLEKSIEFYEKVLGAKLLVKGR------KTAYFDLN----GLWIALNEEKDIPRNEIHQSYTHIAFSIE   72 (139)
T ss_pred             CcEEEEEEEecCHHHHHHHHHhccCCEEEeecC------eeEEEecC----CeEEEeeccCCCCCccCCCCeeEEEEEec
Confidence            468999999999999999999999999764321      22333321    24444432221111112346789999998


Q ss_pred             --chHHhHHHHHHHHHHhCCeeecCCccCCCCCceEEEEECCCCceEEEeechh
Q 022818          232 --DVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNED  283 (291)
Q Consensus       232 --di~~~~~~l~~~~~~~G~~~~~~~~~~~~~~~~~~~~~DpdG~~iel~~~~~  283 (291)
                        |++++++++    +++|+++...|...+. +++.+||+|||||+|||.+...
T Consensus        73 ~~dv~~~~~~l----~~~G~~i~~~~~~~~~-~~~~~~~~DPdGn~iEl~~~~~  121 (139)
T PRK04101         73 EEDFDHWYQRL----KENDVNILPGRERDER-DKKSIYFTDPDGHKFEFHTGTL  121 (139)
T ss_pred             HHHHHHHHHHH----HHCCceEcCCccccCC-CceEEEEECCCCCEEEEEeCCH
Confidence              888888888    9999998877766554 4589999999999999997654

>cd07253 Glo_EDI_BRP_like_2 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.70  E-value=6.8e-16  Score=113.76  Aligned_cols=118  Identities=30%  Similarity=0.501  Sum_probs=84.0

Q ss_pred             ceeeEEEEEEeCCHHHHHHHHHhhcCCEEEEEeecCCCceeEEEEecCCCCcceEEEeeecCC---CCcccCCCCceEEE
Q 022818           21 KRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYG---VTSYDIGTGFGHFA   97 (291)
Q Consensus        21 ~~~i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~---~~~~~~g~~~~~i~   97 (291)
                      +++|+|+.|.|+|++++++||+++||++.....+...    ...+..++    ..+.+.....   ......+.+..|++
T Consensus         1 ~~~l~hi~l~v~d~~~s~~Fy~~~lG~~~~~~~~~~~----~~~~~~~~----~~~~l~~~~~~~~~~~~~~~~~~~hi~   72 (125)
T cd07253           1 IKRIDHVVLTVADIEATLDFYTRVLGMEVVRFGEEVG----RKALRFGS----QKINLHPVGGEFEPAAGSPGPGSDDLC   72 (125)
T ss_pred             CcccceEEEEecCHHHHHHHHHHHhCceeecccccCC----ceEEEeCC----EEEEEecCCCccCcCccCCCCCCceEE
Confidence            4689999999999999999999999999876543211    23344332    1233332211   11222446789999


Q ss_pred             EEeCC-HHHHHHHHHHcCCeeecCCeecCC--CceEEEEEECCCCCEEEEEe
Q 022818           98 IATED-VYKLVENIRAKGGNVTREPGPLKG--GTTHIAFVKDPDGYIFELIQ  146 (291)
Q Consensus        98 ~~v~d-~~~~~~~l~~~G~~~~~~~~~~~~--g~~~~~~~~Dp~G~~iel~~  146 (291)
                      |.+++ +++++++|+++|+++...|....+  +....++|+||+||++|+.+
T Consensus        73 ~~~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~DPdG~~ve~~~  124 (125)
T cd07253          73 LITEPPIDELVAHLEAHGVPIEEGPVPRTGARGPITSVYFRDPDGNLIELSN  124 (125)
T ss_pred             EEecccHHHHHHHHHHCCceeecCcccccCCCCCccEEEEECCCCCEEEeee
Confidence            99975 999999999999998876654322  22345899999999999986

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>cd09011 Glo_EDI_BRP_like_23 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.70  E-value=3.7e-16  Score=114.60  Aligned_cols=113  Identities=19%  Similarity=0.289  Sum_probs=80.1

Q ss_pred             CceEEEeeeCChhhhHHHHHHhcCCeeeeeeccCCccceEEEeccccCCceeEEEEee----ecCcceeecCcceeEEEE
Q 022818          153 PLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTY----NYGVTEYTKGNAYAQVAI  228 (291)
Q Consensus       153 ~~~~v~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~----~~~~~~~~~~~~~~hi~~  228 (291)
                      ++.++.|.|+|++++++||+++|||++....+  .  . ..+ .  .   ...+.+..    .....+...+.+..|++|
T Consensus         2 ~~~~~~l~v~D~~~a~~FY~~~lG~~~~~~~~--~--~-~~~-~--~---~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~   70 (120)
T cd09011           2 KFKNPLLVVKDIEKSKKFYEKVLGLKVVMDFG--E--N-VTF-E--G---GFALQEGYSWLEGISKADIIEKSNNFELYF   70 (120)
T ss_pred             EEEEEEEEECCHHHHHHHHHHhcCCEEeeccC--c--e-EEE-e--c---cceeccchhhhccCCcccccccCCceEEEE
Confidence            57789999999999999999999999764321  1  1 111 1  0   11111100    000111123345579999


Q ss_pred             EecchHHhHHHHHHHHHHhCC-eeecCCccCCCCCceEEEEECCCCceEEEeec
Q 022818          229 STDDVYKSAEVVNLVTQELGG-KITRQPGSIPGLNTKITSFVDPDGWKTVLVDN  281 (291)
Q Consensus       229 ~v~di~~~~~~l~~~~~~~G~-~~~~~~~~~~~~~~~~~~~~DpdG~~iel~~~  281 (291)
                      .|+|+++++++|    +++|+ ++..+|...++ |.+.++|+|||||+|||.+.
T Consensus        71 ~v~dvd~~~~~l----~~~g~~~~~~~~~~~~~-g~r~~~~~DPdGn~iei~~~  119 (120)
T cd09011          71 EEEDFDAFLDKL----KRYDNIEYVHPIKEHPW-GQRVVRFYDPDKHIIEVGES  119 (120)
T ss_pred             EehhhHHHHHHH----HhcCCcEEecCcccCCC-ccEEEEEECCCCCEEEEecc
Confidence            999999999999    99986 78888888776 46899999999999999874

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd08343 ED_TypeI_classII_C C-terminal domain of type I, class II extradiol dioxygenases; catalytic domain

Probab=99.70  E-value=1.3e-15  Score=113.51  Aligned_cols=117  Identities=26%  Similarity=0.387  Sum_probs=86.5

Q ss_pred             EEEEEEeCCHHHHHHHHHhhcCCEEEEEeecCCCceeEEEEecCCCCcceEEEeeecCCCCcccCCCCceEEEEEeCCHH
Q 022818           25 LHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIATEDVY  104 (291)
Q Consensus        25 ~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~~~~i~~~v~d~~  104 (291)
                      +||.|.|+|++++++||+++||++.......+ +....+++..++.  ...+.+.....      ..+..|++|.|+|++
T Consensus         1 ~Hv~l~V~dl~~a~~Fy~~~lG~~~~~~~~~~-~~~~~~~~~~~~~--~~~l~~~~~~~------~~~~~hl~~~v~d~~   71 (131)
T cd08343           1 DHVVLRTPDVAATAAFYTEVLGFRVSDRVGDP-GVDAAAFLRCDED--HHDLALFPGPE------RPGLHHVAFEVESLD   71 (131)
T ss_pred             CcEEEEcCCHHHHHHHHHhcCCCEEEEEEccC-CceeEEEEEcCCC--cceEEEEcCCC------CCCeeEEEEEcCCHH
Confidence            59999999999999999999999987665433 3234566665432  22333332211      347899999999864


Q ss_pred             ---HHHHHHHHcCCeeecCCeecCCCceEEEEEECCCCCEEEEEeCCCC
Q 022818          105 ---KLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRGPT  150 (291)
Q Consensus       105 ---~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~Dp~G~~iel~~~~~~  150 (291)
                         +++++|+++|+++...|...+.+..++++|+||+|++|||.+..+.
T Consensus        72 ~~~~~~~~l~~~G~~i~~~~~~~~~~~~~~~~~~DPdG~~iei~~~~~~  120 (131)
T cd08343          72 DILRAADRLAANGIQIEFGPGRHGPGNNLFLYFRDPDGNRVELSAEMYR  120 (131)
T ss_pred             HHHHHHHHHHHcCCeeEECCCccCCCCcEEEEEECCCCCEEEEEcCCcc
Confidence               7889999999998877665554444558999999999999987643

This family contains the C-terminal, catalytic domain of type I, class II extradiol dioxygenases. Dioxygenases catalyze the incorporation of both atoms of molecular oxygen into substrates using a variety of reaction mechanisms, resulting in the cleavage of aromatic rings. Two major groups of dioxygenases have been identified according to the cleavage site; extradiol enzymes cleave the aromatic ring between a hydroxylated carbon and an adjacent non-hydroxylated carbon, whereas intradiol enzymes cleave the aromatic ring between two hydroxyl groups. Extradiol dioxygenases are classified into type I and type II enzymes. Type I extradiol dioxygenases include class I and class II enzymes. These two classes of enzymes show sequence similarity; the two-domain class II enzymes evolved from a class I enzyme through gene duplication. The extradiol dioxygenases represented in this family are

>cd08355 Glo_EDI_BRP_like_14 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.69  E-value=1.8e-15  Score=111.28  Aligned_cols=117  Identities=22%  Similarity=0.283  Sum_probs=84.5

Q ss_pred             EEEEeCCHHHHHHHHHhhcCCEEEEEeecCCCceeEEEEecCCCCcceEEEeeecCCCC--cccCCCCceEEEEEeCCHH
Q 022818           27 AVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVT--SYDIGTGFGHFAIATEDVY  104 (291)
Q Consensus        27 v~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~--~~~~g~~~~~i~~~v~d~~  104 (291)
                      -.|.|+|++++++||+++||++........++......+..++  ..+.+.........  ....+.+..+++|.|+|++
T Consensus         3 p~l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~--~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~d~d   80 (122)
T cd08355           3 PTLRYRDAAAAIDWLTDAFGFEERLVVPDDDGGVAHAELRFGD--GGVMVGSVRDDYRASSARAGGAGTQGVYVVVDDVD   80 (122)
T ss_pred             EEEEECCHHHHHHHHHHhcCCEEEEEEeCCCCcEEEEEEEECC--EEEEEecCCCcccccccccCCCceEEEEEEECCHH
Confidence            4689999999999999999999987654334433344455543  22333221111110  0113346679999999999


Q ss_pred             HHHHHHHHcCCeeecCCeecCCCceEEEEEECCCCCEEEEEe
Q 022818          105 KLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQ  146 (291)
Q Consensus       105 ~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~Dp~G~~iel~~  146 (291)
                      +++++++++|+++..+|...++|... ++++||+||+|+|.+
T Consensus        81 ~~~~~l~~~G~~v~~~~~~~~~g~~~-~~~~DPdG~~~~l~~  121 (122)
T cd08355          81 AHYERARAAGAEILREPTDTPYGSRE-FTARDPEGNLWTFGT  121 (122)
T ss_pred             HHHHHHHHCCCEEeeCccccCCCcEE-EEEECCCCCEEEEec
Confidence            99999999999999888888887654 889999999999975

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The structures of this family demonstrate domain swapping, which is shared by glyoxalase I and antibiotic resistance proteins.

>cd07263 Glo_EDI_BRP_like_16 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.69  E-value=1.1e-15  Score=111.66  Aligned_cols=117  Identities=24%  Similarity=0.335  Sum_probs=82.5

Q ss_pred             EEEEEeCCHHHHHHHHHhhcCCEEEEEeecCCCceeEEEEecCCCCcceEEEeeecCCCC--cccCCCCceEEEEEeCCH
Q 022818           26 HAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVT--SYDIGTGFGHFAIATEDV  103 (291)
Q Consensus        26 hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~--~~~~g~~~~~i~~~v~d~  103 (291)
                      ||.|.|+|++++.+||+++|||++..+....+ ......+...+. ....+.+.......  ....+.+..|++|.|+|+
T Consensus         1 Hv~l~v~d~~~~~~fY~~~lG~~~~~~~~~~~-~~~~~~~~~~~~-~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~di   78 (119)
T cd07263           1 LVSLYVDDQDKALAFYTEKLGFEVREDVPMGG-GFRWVTVAPPGS-PETSLVLAPPANPAAMSGLQPGGTPGLVLATDDI   78 (119)
T ss_pred             CceEEeCCHHHHHHHHHhccCeEEEEeeccCC-CcEEEEEeCCCC-CeeEEEEeCCCCccccccccCCCceEEEEEehHH
Confidence            89999999999999999999999987654222 223333332221 13334443332221  112344678999999999


Q ss_pred             HHHHHHHHHcCCeeecCCeecCCCceEEEEEECCCCCEEEEEe
Q 022818          104 YKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQ  146 (291)
Q Consensus       104 ~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~Dp~G~~iel~~  146 (291)
                      ++++++|+++|+++..++....++  +.++++||+||+|+|++
T Consensus        79 ~~~~~~l~~~g~~~~~~~~~~~~~--~~~~~~DP~G~~ie~~~  119 (119)
T cd07263          79 DATYEELKARGVEFSEEPREMPYG--TVAVFRDPDGNLFVLVQ  119 (119)
T ss_pred             HHHHHHHHhCCCEEeeccccCCCc--eEEEEECCCCCEEEEeC
Confidence            999999999999998877444443  34899999999999974

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd07266 HPCD_N_class_II N-terminal domain of 3,4-dihydroxyphenylacetate 2,3-dioxygenase (HPCD); belongs to the type I class II family of extradiol dioxygenases

Probab=99.69  E-value=8.2e-16  Score=112.92  Aligned_cols=116  Identities=25%  Similarity=0.306  Sum_probs=82.2

Q ss_pred             cceeeEEEEEEeCCHHHHHHHHHhhcCCEEEEEeecCCCceeEEEEecCCCCcceEEEeeecCCCCcccCCCCceEEEEE
Q 022818           20 DKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIA   99 (291)
Q Consensus        20 ~~~~i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~~~~i~~~   99 (291)
                      +++++.|+.|.|+|++++.+||+++||+++.....   +   .+++..........+.+...       ...+..|++|.
T Consensus         1 ~~~~i~hi~l~v~d~~~~~~Fy~~~lG~~~~~~~~---~---~~~~~~~~~~~~~~~~~~~~-------~~~~~~hi~~~   67 (121)
T cd07266           1 NILRLGHVELRVTDLEKSREFYVDVLGLVETEEDD---D---RIYLRGLEEFIHHSLVLTKA-------PVAGLGHIAFR   67 (121)
T ss_pred             CcceeeEEEEEcCCHHHHHHHHHhccCCEEeccCC---C---eEEEEecCCCceEEEEEeeC-------CCCceeEEEEE
Confidence            46899999999999999999999999999865422   1   23343211112222333221       12368899999


Q ss_pred             e---CCHHHHHHHHHHcCCeeecCCeecCCCceEEEEEECCCCCEEEEEeCC
Q 022818          100 T---EDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRG  148 (291)
Q Consensus       100 v---~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~Dp~G~~iel~~~~  148 (291)
                      |   +|+++++++++++|+++...|.....+....+++.||+||+||++...
T Consensus        68 v~~~~dv~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~DPdG~~ve~~~~~  119 (121)
T cd07266          68 VRSEEDLDKAEAFFQELGLPTEWVEAGEEPGQGRALRVEDPLGFPIEFYAEM  119 (121)
T ss_pred             CCCHHHHHHHHHHHHHcCCCcccccCCcCCCCccEEEEECCCCCEEEEEecc
Confidence            9   579999999999999887654433333334589999999999998653

This subfamily contains the N-terminal, non-catalytic, domain of HPCD. HPCD catalyses the second step in the degradation of 4-hydroxyphenylacetate to succinate and pyruvate. The aromatic ring of 4-hydroxyphenylacetate is opened by this dioxygenase to yield the 3,4-diol product, 2-hydroxy-5-carboxymethylmuconate semialdehyde. HPCD is a homotetramer and each monomer contains two structurally homologous barrel-shaped domains at the N- and C-terminus. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism. Most extradiol dioxygenases contain Fe(II) in their active site, but HPCD can be activated by either Mn(II) or Fe(II). These enzymes belong to the type I class II family of extradiol dioxygenases. The class III 3,4-dihydroxyphenylacetate 2,3-dioxygenases belong to a differ

>cd08364 FosX FosX, a fosfomycin resistance protein, catalyzes the addition of a water molecule to the C1 position of the antibiotic with inversion of configuration at C1

Probab=99.69  E-value=1.8e-15  Score=112.66  Aligned_cols=120  Identities=20%  Similarity=0.251  Sum_probs=81.9

Q ss_pred             cceeeEEEEEEeCCHHHHHHHHHhhcCCEEEEEeecCCCc-eeEEEEecCCCCcceEEEeeecCCCCcccCCCCceEEEE
Q 022818           20 DKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEK-YSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAI   98 (291)
Q Consensus        20 ~~~~i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~~~~i~~   98 (291)
                      |+.+|+|+.|.|+|++++.+||+++||+....+....... ....++..++    ..+.+......    ...+.+|++|
T Consensus         1 mi~~i~hv~l~V~dl~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~----~~i~l~~~~~~----~~~~~~Hiaf   72 (131)
T cd08364           1 MIEGLSHITLIVKDLNKTTAFLQNIFNAREVYSSGDKTFSLSKEKFFLIGG----LWIAIMEGDSL----QERTYNHIAF   72 (131)
T ss_pred             CcccEeEEEEEeCCHHHHHHHHHHHhCCeeEEecccccccccceeEEEcCC----eEEEEecCCCC----CCCCceEEEE
Confidence            5789999999999999999999999999876553221100 0111222222    12333322111    1236889999


Q ss_pred             EeC--CHHHHHHHHHHcCCeeecCCeecCCCceEEEEEECCCCCEEEEEeCC
Q 022818           99 ATE--DVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRG  148 (291)
Q Consensus        99 ~v~--d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~Dp~G~~iel~~~~  148 (291)
                      .|+  +++++.++|+++|+++..+. ...++..+.+||+||+||.|||....
T Consensus        73 ~v~~~~ld~~~~~l~~~gv~~~~~~-~~~~~~g~~~yf~DPdG~~iEl~~~~  123 (131)
T cd08364          73 KISDSDVDEYTERIKALGVEMKPPR-PRVQGEGRSIYFYDFDNHLFELHTGT  123 (131)
T ss_pred             EcCHHHHHHHHHHHHHCCCEEecCC-ccccCCceEEEEECCCCCEEEEecCC
Confidence            997  79999999999999876432 33333334599999999999998654

This subfamily family contains FosX, a fosfomycin resistant protein. Fosfomycin inhibits the enzyme UDP-Nacetylglucosamine-3-enolpyruvyltransferase (MurA), which catalyzes the first committed step in bacterial cell wall biosynthesis. FosX catalyzes the addition of a water molecule to the C1 position of the antibiotic with inversion of the configuration at C1 in the presence of Mn(II). The hydrated fosfomycin loses the inhibition activity. FosX is evolutionarily related to glyoxalase I and type I extradiol dioxygenases.

>cd08363 FosB FosB, a fosfomycin resistance protein, catalyzes the Mg(II) dependent addition of L-cysteine to the epoxide ring of fosfomycin

Probab=99.69  E-value=7.9e-16  Score=114.61  Aligned_cols=114  Identities=23%  Similarity=0.377  Sum_probs=80.6

Q ss_pred             eEEEEEEeCCHHHHHHHHHhhcCCEEEEEeecCCCceeEEEEecCCCCcceEEEeeecCCCCcccCCCCceEEEEEeCC-
Q 022818           24 FLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIATED-  102 (291)
Q Consensus        24 i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~~~~i~~~v~d-  102 (291)
                      |+||.|.|+|++++.+||+++||+++....+      ...++..++  .  .+.+.............+..|++|.+++ 
T Consensus         1 i~HV~l~V~Dl~~a~~FY~~~LG~~~~~~~~------~~~~~~~~~--~--~l~l~~~~~~~~~~~~~~~~hiaf~v~~~   70 (131)
T cd08363           1 INHMTFSVSNLDKSISFYKHVFMEKLLVLGE------KTAYFTIGG--T--WLALNEEPDIPRNEIRQSYTHIAFTIEDS   70 (131)
T ss_pred             CceEEEEECCHHHHHHHHHHhhCCEEeccCC------ccceEeeCc--e--EEEEEccCCCCcCCcCccceEEEEEecHH
Confidence            6899999999999999999999999865322      123444432  2  2333222211111123468899999974 


Q ss_pred             -HHHHHHHHHHcCCeeecCCeecCCCceEEEEEECCCCCEEEEEeCC
Q 022818          103 -VYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRG  148 (291)
Q Consensus       103 -~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~Dp~G~~iel~~~~  148 (291)
                       +++++++|+++|+++..++....++.. .+||+||+||+||+.+..
T Consensus        71 dld~~~~~l~~~G~~~~~~~~~~~~~~~-~~~f~DPdG~~iEl~~~~  116 (131)
T cd08363          71 EFDAFYTRLKEAGVNILPGRKRDVRDRK-SIYFTDPDGHKLEVHTGT  116 (131)
T ss_pred             HHHHHHHHHHHcCCcccCCCccccCcce-EEEEECCCCCEEEEecCc
Confidence             999999999999997665544444444 489999999999998765

This subfamily family contains FosB, a fosfomycin resistant protein. Fosfomycin inhibits the enzyme UDP-Nacetylglucosamine-3-enolpyruvyltransferase (MurA), which catalyzes the first committed step in bacterial cell wall biosynthesis. FosB catalyzes the Mg(II) dependent addition of L-cysteine to the epoxide ring of fosfomycin, (1R,2S)-epoxypropylphosphonic acid, rendering it inactive. FosB is evolutionarily related to glyoxalase I and type I extradiol dioxygenases

>cd08355 Glo_EDI_BRP_like_14 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.69  E-value=1.6e-15  Score=111.50  Aligned_cols=115  Identities=20%  Similarity=0.200  Sum_probs=83.1

Q ss_pred             EEeeeCChhhhHHHHHHhcCCeeeeeeccCCccceEEEeccccCCceeEEEEeeecCcce----eecCcceeEEEEEecc
Q 022818          157 VMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTE----YTKGNAYAQVAISTDD  232 (291)
Q Consensus       157 v~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~----~~~~~~~~hi~~~v~d  232 (291)
                      -.|.|+|++++++||+++||+++......+++......+..++    ..+.+........    ....++..|++|.|+|
T Consensus         3 p~l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~----~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~d   78 (122)
T cd08355           3 PTLRYRDAAAAIDWLTDAFGFEERLVVPDDDGGVAHAELRFGD----GGVMVGSVRDDYRASSARAGGAGTQGVYVVVDD   78 (122)
T ss_pred             EEEEECCHHHHHHHHHHhcCCEEEEEEeCCCCcEEEEEEEECC----EEEEEecCCCcccccccccCCCceEEEEEEECC
Confidence            4689999999999999999999876654333332233333221    2333332221111    1133466899999999


Q ss_pred             hHHhHHHHHHHHHHhCCeeecCCccCCCCCceEEEEECCCCceEEEee
Q 022818          233 VYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVD  280 (291)
Q Consensus       233 i~~~~~~l~~~~~~~G~~~~~~~~~~~~~~~~~~~~~DpdG~~iel~~  280 (291)
                      ++++++++    +++|+++..+|...++ |.+.++++|||||+|+|.+
T Consensus        79 ~d~~~~~l----~~~G~~v~~~~~~~~~-g~~~~~~~DPdG~~~~l~~  121 (122)
T cd08355          79 VDAHYERA----RAAGAEILREPTDTPY-GSREFTARDPEGNLWTFGT  121 (122)
T ss_pred             HHHHHHHH----HHCCCEEeeCccccCC-CcEEEEEECCCCCEEEEec
Confidence            99999999    9999999999888776 4688999999999999975

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The structures of this family demonstrate domain swapping, which is shared by glyoxalase I and antibiotic resistance proteins.

>cd08363 FosB FosB, a fosfomycin resistance protein, catalyzes the Mg(II) dependent addition of L-cysteine to the epoxide ring of fosfomycin

Probab=99.69  E-value=5.6e-16  Score=115.42  Aligned_cols=116  Identities=22%  Similarity=0.262  Sum_probs=80.8

Q ss_pred             ceEEEeeeCChhhhHHHHHHhcCCeeeeeeccCCccceEEEeccccCCceeEEEEeeecCcceeecCcceeEEEEEecc-
Q 022818          154 LCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDD-  232 (291)
Q Consensus       154 ~~~v~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~hi~~~v~d-  232 (291)
                      |.||.|.|+|++++.+||+++|||++.....  .  .  ..+..+    +..+.+....+.+......++.|++|.+++ 
T Consensus         1 i~HV~l~V~Dl~~a~~FY~~~LG~~~~~~~~--~--~--~~~~~~----~~~l~l~~~~~~~~~~~~~~~~hiaf~v~~~   70 (131)
T cd08363           1 INHMTFSVSNLDKSISFYKHVFMEKLLVLGE--K--T--AYFTIG----GTWLALNEEPDIPRNEIRQSYTHIAFTIEDS   70 (131)
T ss_pred             CceEEEEECCHHHHHHHHHHhhCCEEeccCC--c--c--ceEeeC----ceEEEEEccCCCCcCCcCccceEEEEEecHH
Confidence            5799999999999999999999999764311  1  1  122221    244544332221111223477899999975 


Q ss_pred             -hHHhHHHHHHHHHHhCCeeecCCccCCCCCceEEEEECCCCceEEEeechhh
Q 022818          233 -VYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNEDF  284 (291)
Q Consensus       233 -i~~~~~~l~~~~~~~G~~~~~~~~~~~~~~~~~~~~~DpdG~~iel~~~~~~  284 (291)
                       +++++++|    +++|+++..++...+. +++.+||+|||||+|||.+....
T Consensus        71 dld~~~~~l----~~~G~~~~~~~~~~~~-~~~~~~f~DPdG~~iEl~~~~~~  118 (131)
T cd08363          71 EFDAFYTRL----KEAGVNILPGRKRDVR-DRKSIYFTDPDGHKLEVHTGTLA  118 (131)
T ss_pred             HHHHHHHHH----HHcCCcccCCCccccC-cceEEEEECCCCCEEEEecCcHH
Confidence             77777777    9999998765544333 35889999999999999987653

This subfamily family contains FosB, a fosfomycin resistant protein. Fosfomycin inhibits the enzyme UDP-Nacetylglucosamine-3-enolpyruvyltransferase (MurA), which catalyzes the first committed step in bacterial cell wall biosynthesis. FosB catalyzes the Mg(II) dependent addition of L-cysteine to the epoxide ring of fosfomycin, (1R,2S)-epoxypropylphosphonic acid, rendering it inactive. FosB is evolutionarily related to glyoxalase I and type I extradiol dioxygenases

>cd07256 HPCD_C_class_II C-terminal domain of 3,4-dihydroxyphenylacetate 2,3-dioxygenase (HPCD), which catalyses the second step in the degradation of 4-hydroxyphenylacetate to succinate and pyruvate; belongs to the type I class II family of extradiol dioxygenases

Probab=99.68  E-value=2.7e-15  Score=115.77  Aligned_cols=118  Identities=21%  Similarity=0.306  Sum_probs=80.0

Q ss_pred             eeeEEEEEEeCCHHHHHHHHHhhcCCEEEEEeecCCCceeEEEEecCCCCcceEEEeeecCCCCcccCCCCceEEEEEeC
Q 022818           22 RRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIATE  101 (291)
Q Consensus        22 ~~i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~~~~i~~~v~  101 (291)
                      ++|+||.|.|+|++++++||+++|||++......+.+.....++..++.  ...+.+...       .+.++.|++|.|+
T Consensus         2 ~~l~Hv~l~V~Dl~~s~~FY~~vLGl~~~~~~~~~~~~~~~~~l~~~~~--~~~i~l~~~-------~~~~~~Hiaf~v~   72 (161)
T cd07256           2 QRLDHFNLRVPDVDAGLAYYRDELGFRVSEYTEDDDGTTWAAWLHRKGG--VHDTALTGG-------NGPRLHHVAFWVP   72 (161)
T ss_pred             ceEEEEEEecCCHHHHHHHHHhccCCEEEEEeccCCCcEEEEEEecCCC--cceEEEecC-------CCCceeEEEEEcC
Confidence            5899999999999999999999999998754433223223344433221  122322211       2347899999997


Q ss_pred             C---HHHHHHHHHHcCCee--ecCCeecCCCceEEEEEECCCCCEEEEEeCC
Q 022818          102 D---VYKLVENIRAKGGNV--TREPGPLKGGTTHIAFVKDPDGYIFELIQRG  148 (291)
Q Consensus       102 d---~~~~~~~l~~~G~~~--~~~~~~~~~g~~~~~~~~Dp~G~~iel~~~~  148 (291)
                      |   +++++++|+++|+..  ...|.....+...++|++||+||.||+++..
T Consensus        73 ~~~~v~~~~~~L~~~G~~~~~~~~p~~~g~~~~~~~y~~DPdG~~iEl~~~~  124 (161)
T cd07256          73 EPHNIIRTCDLLAAAGYSDRIERGPGRHGISNAFFLYLRDPDGHRIEIYTGD  124 (161)
T ss_pred             CHHHHHHHHHHHHHcCCCcccccCCCccCCCCceEEEEECCCCCeEEEeecC
Confidence            6   778889999999863  2233322222233589999999999998654

This subfamily contains the C-terminal, catalytic, domain of HPCD. HPCD catalyses the second step in the degradation of 4-hydroxyphenylacetate to succinate and pyruvate. The aromatic ring of 4-hydroxyphenylacetate is opened by this dioxygenase to yield the 3,4-diol product, 2-hydroxy-5-carboxymethylmuconate semialdehyde. HPCD is a homotetramer and each monomer contains two structurally homologous barrel-shaped domains at the N- and C-terminus. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism. Most extradiol dioxygenases contain Fe(II) in their active site, but HPCD can be activated by either Mn(II) or Fe(II). These enzymes belong to the type I class II family of

>cd07249 MMCE Methylmalonyl-CoA epimerase (MMCE)

Probab=99.68  E-value=1.1e-15  Score=113.15  Aligned_cols=119  Identities=22%  Similarity=0.329  Sum_probs=86.1

Q ss_pred             ceEEEeeeCChhhhHHHHHHhcCCeeeeeeccC-CccceEEEeccccCCceeEEEEeeecCcce------eecCcceeEE
Q 022818          154 LCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKP-EYKYTLAMLGYAEEDQTTVLELTYNYGVTE------YTKGNAYAQV  226 (291)
Q Consensus       154 ~~~v~l~v~d~~~~~~fy~~~lG~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~------~~~~~~~~hi  226 (291)
                      +.||.|.|+|++++.+||+++|||++....... +......++..+    ...+++..+.....      ...+++..|+
T Consensus         1 ~~hv~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~----~~~l~l~~~~~~~~~~~~~~~~~~~g~~h~   76 (128)
T cd07249           1 IDHIGIAVPDLEAAIKFYRDVLGVGPWEEEEVPPEQGVRVAFLGLG----NVQIELIEPLDDDSPIAKFLEKRGEGLHHI   76 (128)
T ss_pred             CcEEEEEeCCHHHHHHHHHHhhCCCCccccccCcccccEEEEEEcC----CEEEEEEEECCCCCcHHHHHhcCCCceEEE
Confidence            579999999999999999999999987655432 233445555532    45566655432211      1245688999


Q ss_pred             EEEecchHHhHHHHHHHHHHhCCeeecCCccCCCCCceEEEEECCC--CceEEEee
Q 022818          227 AISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPD--GWKTVLVD  280 (291)
Q Consensus       227 ~~~v~di~~~~~~l~~~~~~~G~~~~~~~~~~~~~~~~~~~~~Dpd--G~~iel~~  280 (291)
                      +|.|+|++++++++    +++|+++..+|...+.++.++.++.||+  |++|||++
T Consensus        77 ~f~v~d~~~~~~~l----~~~G~~~~~~~~~~~~~g~~~~~~d~~~~~g~~iE~~~  128 (128)
T cd07249          77 AFEVDDIDAALARL----KAQGVRLLQEGPRIGAGGKRVAFLHPKDTGGVLIELVE  128 (128)
T ss_pred             EEEeCCHHHHHHHH----HHCCCeeeccCCCccCCCCEEEEEecCCCceEEEEecC
Confidence            99999999999999    9999999888775444343445455555  99999985

MMCE, also called methylmalonyl-CoA racemase (EC 5.1.99.1) interconverts (2R)-methylmalonyl-CoA and (2S)-methylmalonyl-CoA. MMCE has been found in bacteria, archaea, and in animals. In eukaryotes, MMCE is an essential enzyme in a pathway that converts propionyl-CoA to succinyl-CoA, and is important in the breakdown of odd-chain length fatty acids, branched-chain amino acids, and other metabolites. In bacteria, MMCE participates in the reverse pathway for propionate fermentation, glyoxylate regeneration, and the biosynthesis of polyketide antibiotics. MMCE is closely related to glyoxalase I and type I extradiol dioxygenases.

>cd08347 PcpA_C_like C-terminal domain of Sphingobium chlorophenolicum 2,6-dichloro-p-hydroquinone 1,2-dioxygenase (PcpA), and similar proteins

Probab=99.68  E-value=2.2e-15  Score=115.49  Aligned_cols=117  Identities=18%  Similarity=0.188  Sum_probs=82.1

Q ss_pred             eeEEEEEEeCCHHHHHHHHHhhcCCEEEEEeecCCCceeEEEEecCCCCcceEEEeeecCCCCc-ccCCCCceEEEEEeC
Q 022818           23 RFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTS-YDIGTGFGHFAIATE  101 (291)
Q Consensus        23 ~i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~-~~~g~~~~~i~~~v~  101 (291)
                      +|+||.|.|+|++++.+||+++|||++..+..   +  ...++..+. ..+..+.+........ .....++.|++|.|+
T Consensus         1 gl~HI~i~V~Dle~s~~FY~~~LG~~~~~~~~---~--~~~~~~~~~-~~~~~l~l~~~~~~~~~~~~~~~l~Hiaf~v~   74 (157)
T cd08347           1 GLHGVTLTVRDPEATAAFLTDVLGFREVGEEG---D--RVRLEEGGG-GPGAVVDVLEEPDQPRGRPGAGTVHHVAFRVP   74 (157)
T ss_pred             CcccEEEEeCCHHHHHHHHHHhcCCEEEeeeC---C--EEEEEecCC-CCCCEEEEEeCCCCCCCcccCCceEEEEEECC
Confidence            57999999999999999999999999976543   1  223333221 2234455544322111 112346889999998


Q ss_pred             C---HHHHHHHHHHcCCeeecCCeecCCCceEEEEEECCCCCEEEEEeCC
Q 022818          102 D---VYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRG  148 (291)
Q Consensus       102 d---~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~Dp~G~~iel~~~~  148 (291)
                      |   +++++++|+++|+++.. +...  +..+.+||+||+|+.||++...
T Consensus        75 d~~dvd~~~~~L~~~Gv~~~~-~~~~--~~~~s~yf~DPdG~~iEl~~~~  121 (157)
T cd08347          75 DDEELEAWKERLEALGLPVSG-IVDR--FYFKSLYFREPGGILFEIATDG  121 (157)
T ss_pred             CHHHHHHHHHHHHHCCCCccc-cccc--ccEEEEEEECCCCcEEEEEECC
Confidence            8   89999999999997543 2222  2334589999999999999874

The C-terminal domain of Sphingobium chlorophenolicum (formerly Sphingomonas chlorophenolica) 2,6-dichloro-p-hydroquinone 1,2-dioxygenase (PcpA), and similar proteins. PcpA is a key enzyme in the pentachlorophenol (PCP) degradation pathway, catalyzing the conversion of 2,6-dichloro-p-hydroquinone to 2-chloromaleylacetate. This domain belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases.

>PF00903 Glyoxalase: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily This Prosite is specific to glyoxalases This Prosite is specific to Extradiol ring-cleavage dioxygenases This prints entry is specific to bleomycin resistance protein

Probab=99.68  E-value=2.5e-16  Score=116.43  Aligned_cols=120  Identities=23%  Similarity=0.250  Sum_probs=80.0

Q ss_pred             CceEEEeeeCChhhhHHHHHHhcCCeeeeeecc--CCccceEEEeccccCCceeEEEEeeecCcceeec---CcceeEEE
Q 022818          153 PLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDK--PEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTK---GNAYAQVA  227 (291)
Q Consensus       153 ~~~~v~l~v~d~~~~~~fy~~~lG~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~---~~~~~hi~  227 (291)
                      ++.|++|.|+|++++.+||+++|||++......  .........+..+.  ....+......+......   ..+..|++
T Consensus         1 ~l~Hi~i~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~l~~~~~~~~~~~~~~~~~~~~~~i~   78 (128)
T PF00903_consen    1 GLDHIAIRVKDLEKAIDFYTDVLGFRLVEESDNDGEGGDLRIAFLRIGE--GHIELFLNPSPPPRASGHSFPEHGGHHIA   78 (128)
T ss_dssp             EEEEEEEEESCHHHHHHHHHHTTTSEEEEEEEEESTTEEEEEEEEESTS--SCEEEEEEESSSSSSEEEHHHSHTSEEEE
T ss_pred             CeEEEEEEcCCHHHHHHHHHHHhCCcEEeeeccccccccccceeecccc--cceeeeeeccccccccccccccccceeEE
Confidence            478999999999999999999999999887662  22223344444322  233333322222211111   01345777


Q ss_pred             EEec---chHHhHHHHHHHHHHhCCeeecCCccCCCCCceEEEEECCCCceEEE
Q 022818          228 ISTD---DVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVL  278 (291)
Q Consensus       228 ~~v~---di~~~~~~l~~~~~~~G~~~~~~~~~~~~~~~~~~~~~DpdG~~iel  278 (291)
                      +.+.   |++++.++|    ++.|+++..+|.........++|++||+||.|||
T Consensus        79 ~~~~~~~dl~~~~~~l----~~~g~~~~~~~~~~~~~~~~~~y~~Dp~G~~iE~  128 (128)
T PF00903_consen   79 FLAFDVDDLDAAYERL----KAQGVEIVEEPDRYYFGSGYSFYFRDPDGNLIEF  128 (128)
T ss_dssp             EEESSHHHHHHHHHHH----HHTTGEEEEEEEEHSTTCEEEEEEEETTSEEEEE
T ss_pred             EEeccHHHHHHHHHHH----hhcCccEEecCCCCCCCCEEEEEEECCCCCEEEC
Confidence            7766   455566666    9999999999887776554556899999999997

; InterPro: IPR004360 Glyoxalase I (4.4.1.5 from EC) (lactoylglutathione lyase) catalyzes the first step of the glyoxal pathway. S-lactoylglutathione is then converted by glyoxalase II to lactic acid []. Glyoxalase I is an ubiquitous enzyme which binds one mole of zinc per subunit. The bacterial and yeast enzymes are monomeric while the mammalian one is homodimeric. The sequence of glyoxalase I is well conserved. The domain represented by this entry is found in glyoxalase I and in other related proteins, including fosfomycin resistance proteins FosB [], FosA [], FosX [] and dioxygenases (eg. 4-hydroxyphenylpyruvate dioxygenase).; PDB: 1CJX_A 1NPB_E 3OJT_C 3OJN_A 2IG9_B 3OJJ_B 3OJK_D 1Q0C_D 1F1X_C 3BZA_B ....

>cd07239 BphC5-RK37_C_like C-terminal, catalytic, domain of BphC5 (2,3-dihydroxybiphenyl 1,2-dioxygenase) from Bacterium Rhodococcus rhodochrous K37 and similar proteins

Probab=99.68  E-value=1.2e-15  Score=115.33  Aligned_cols=114  Identities=18%  Similarity=0.324  Sum_probs=82.1

Q ss_pred             CCceEEEeeeCChhhhHHHHHHhcCCeeeeeeccCCccceEEEeccccCCceeEEEEeeecCcceeecCcceeEEEEEec
Q 022818          152 EPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTD  231 (291)
Q Consensus       152 ~~~~~v~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~hi~~~v~  231 (291)
                      .++.|+.|.|.|++++++||+++|||++.....  +   ...++..+..  ...+.+..       ...+++.|++|.|+
T Consensus         3 ~~l~Hv~i~V~Dle~s~~FY~~~LG~~~~~~~~--~---~~~~l~~~~~--~~~~~l~~-------~~~~~~~hiaf~v~   68 (144)
T cd07239           3 VKISHVVLNSPDVDKTVAFYEDVLGFRVSDWLG--D---QMAFLRCNSD--HHSIAIAR-------GPHPSLNHVAFEMP   68 (144)
T ss_pred             ceeeEEEEECCCHHHHHHHHHhcCCCEEEEeeC--C---eEEEEECCCC--cceEEEcc-------CCCCceEEEEEECC
Confidence            468999999999999999999999999764421  1   2233443332  33444422       11357889999999


Q ss_pred             chHHhH---HHHHHHHHHhCCeeecCCccCCCCCceEEEEECCCCceEEEeechh
Q 022818          232 DVYKSA---EVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNED  283 (291)
Q Consensus       232 di~~~~---~~l~~~~~~~G~~~~~~~~~~~~~~~~~~~~~DpdG~~iel~~~~~  283 (291)
                      |++++.   ++|    +++|+++...|.....+..+++||+||+||.|||++...
T Consensus        69 d~~~l~~~~~~l----~~~Gi~~~~~~~~~~~~~~~~~yf~DPdG~~iE~~~~~~  119 (144)
T cd07239          69 SIDEVMRGIGRM----IDKGIDILWGPGRHGPGDNTFAYFLDPGGFVIEYTSELE  119 (144)
T ss_pred             CHHHHHHHHHHH----HHcCCceeeCCcccCCCCCEEEEEECCCCcEEEeccCce
Confidence            977765   556    999999887765543333577899999999999998754

2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC) catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). The enzyme contains a N-terminal and a C-terminal domain of similar structure fold, resulting from an ancient gene duplication. BphC belongs to the type I extradiol dioxygenase family, which requires a metal in the active site for its catalytic activity. Polychlorinated biphenyl degrading bacteria demonstrate multiplicity of BphCs. Bacterium Rhodococcus rhodochrous K37 has eight genes encoding BphC enzymes. This family includes the C-terminal domain of BphC5-RrK37. The crystal structure of the protein from Novosphingobium aromaticivorans has a Mn(II)in the active site, although most proteins of type I extradiol dio

>cd09013 BphC-JF8_N_like N-terminal, non-catalytic, domain of BphC_JF8, (2,3-dihydroxybiphenyl 1,2-dioxygenase) from Bacillus sp

Probab=99.68  E-value=1.4e-15  Score=111.72  Aligned_cols=112  Identities=21%  Similarity=0.232  Sum_probs=77.1

Q ss_pred             CCCceEEEeeeCChhhhHHHHHHhcCCeeeeeeccCCccceEEEeccccCCceeEEEEeeecCcceeecCcceeEEEEEe
Q 022818          151 PEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAIST  230 (291)
Q Consensus       151 ~~~~~~v~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~hi~~~v  230 (291)
                      ..++.|+.|.|+|++++.+||+++||+++..+.+      ...++..........+.+..       ...++..|++|.+
T Consensus         4 i~~i~hv~l~v~dl~~a~~FY~~~lG~~~~~~~~------~~~~l~~~~~~~~~~~~l~~-------~~~~~~~h~af~v   70 (121)
T cd09013           4 IAHLAHVELLTPKPEESLWFFTDVLGLEETGREG------QSVYLRAWGDYEHHSLKLTE-------SPEAGLGHIAWRA   70 (121)
T ss_pred             ccEeeEEEEEeCCHHHHHHHHHhCcCCEEEeecC------CeEEEEeccCCCccEEEEee-------CCCCceEEEEEEc
Confidence            3578999999999999999999999999876532      12233322211233444432       1235788999999


Q ss_pred             cc---hHHhHHHHHHHHHHhCCeeecCCccCCCCCceEEEEECCCCceEEEeec
Q 022818          231 DD---VYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDN  281 (291)
Q Consensus       231 ~d---i~~~~~~l~~~~~~~G~~~~~~~~~~~~~~~~~~~~~DpdG~~iel~~~  281 (291)
                      ++   ++++.+++    +++|+++...+.. +. .+..+||+|||||+|||...
T Consensus        71 ~~~~~v~~~~~~l----~~~G~~~~~~~~~-~~-~~~~~~~~DPdG~~iEl~~~  118 (121)
T cd09013          71 SSPEALERRVAAL----EASGLGIGWIEGD-PG-HGKAYRFRSPDGHPMELYWE  118 (121)
T ss_pred             CCHHHHHHHHHHH----HHcCCccccccCC-CC-CcceEEEECCCCCEEEEEEe
Confidence            85   55555566    9999987433332 22 24678999999999999864

JF8 and similar proteins. 2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC) catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, a key step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). BphC belongs to the type I extradiol dioxygenase family, which requires a metal ion in the active site in its catalytic mechanism. Polychlorinated biphenyl degrading bacteria demonstrate a multiplicity of BphCs. This subfamily of BphC is represented by the enzyme purified from the thermophilic biphenyl and naphthalene degrader, Bacillus sp. JF8. The members in this family of BphC enzymes may use either Mn(II) or Fe(II) as cofactors. The enzyme purified from Bacillus sp. JF8 is Mn(II)-dependent, however, the enzyme from Rhodococcus jostii RHAI has Fe(II) bound to it. BphC_JF8 is thermostable and its optimum activity is at 85 degrees C

>cd08343 ED_TypeI_classII_C C-terminal domain of type I, class II extradiol dioxygenases; catalytic domain

Probab=99.68  E-value=1.9e-15  Score=112.64  Aligned_cols=116  Identities=25%  Similarity=0.304  Sum_probs=84.0

Q ss_pred             eEEEeeeCChhhhHHHHHHhcCCeeeeeeccCCccceEEEeccccCCceeEEEEeeecCcceeecCcceeEEEEEecchH
Q 022818          155 CQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDVY  234 (291)
Q Consensus       155 ~~v~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~hi~~~v~di~  234 (291)
                      .||.|.|+|++++++||+++||+++......+ +.....++..+..  ...+.+....      ..+++.|++|.|+|++
T Consensus         1 ~Hv~l~V~dl~~a~~Fy~~~lG~~~~~~~~~~-~~~~~~~~~~~~~--~~~l~~~~~~------~~~~~~hl~~~v~d~~   71 (131)
T cd08343           1 DHVVLRTPDVAATAAFYTEVLGFRVSDRVGDP-GVDAAAFLRCDED--HHDLALFPGP------ERPGLHHVAFEVESLD   71 (131)
T ss_pred             CcEEEEcCCHHHHHHHHHhcCCCEEEEEEccC-CceeEEEEEcCCC--cceEEEEcCC------CCCCeeEEEEEcCCHH
Confidence            48999999999999999999999986554322 2223444443222  3344443211      1457899999999864


Q ss_pred             ---HhHHHHHHHHHHhCCeeecCCccCCCCCceEEEEECCCCceEEEeechh
Q 022818          235 ---KSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNED  283 (291)
Q Consensus       235 ---~~~~~l~~~~~~~G~~~~~~~~~~~~~~~~~~~~~DpdG~~iel~~~~~  283 (291)
                         ++++++    +++|+++..+|...+.++.++++|+||+||+|||++...
T Consensus        72 ~~~~~~~~l----~~~G~~i~~~~~~~~~~~~~~~~~~DPdG~~iei~~~~~  119 (131)
T cd08343          72 DILRAADRL----AANGIQIEFGPGRHGPGNNLFLYFRDPDGNRVELSAEMY  119 (131)
T ss_pred             HHHHHHHHH----HHcCCeeEECCCccCCCCcEEEEEECCCCCEEEEEcCCc
Confidence               455666    999999988877666544678999999999999997654

This family contains the C-terminal, catalytic domain of type I, class II extradiol dioxygenases. Dioxygenases catalyze the incorporation of both atoms of molecular oxygen into substrates using a variety of reaction mechanisms, resulting in the cleavage of aromatic rings. Two major groups of dioxygenases have been identified according to the cleavage site; extradiol enzymes cleave the aromatic ring between a hydroxylated carbon and an adjacent non-hydroxylated carbon, whereas intradiol enzymes cleave the aromatic ring between two hydroxyl groups. Extradiol dioxygenases are classified into type I and type II enzymes. Type I extradiol dioxygenases include class I and class II enzymes. These two classes of enzymes show sequence similarity; the two-domain class II enzymes evolved from a class I enzyme through gene duplication. The extradiol dioxygenases represented in this family are

>cd07264 Glo_EDI_BRP_like_15 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.68  E-value=2.5e-15  Score=110.89  Aligned_cols=117  Identities=23%  Similarity=0.326  Sum_probs=80.6

Q ss_pred             eEEEEEEeCCHHHHHHHHHhhcCCEEEEEeecCCCceeEEEEecCCCCcceEEEeee---cC---C--CCcccCCCCceE
Q 022818           24 FLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTY---NY---G--VTSYDIGTGFGH   95 (291)
Q Consensus        24 i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~---~~---~--~~~~~~g~~~~~   95 (291)
                      +.|+.|.|+|++++.+||+++|||+......  .+.+  ..+..++  ..+.+....   ..   .  ........+..+
T Consensus         1 ~~~~~l~v~D~~~s~~FY~~~lG~~~~~~~~--~~~~--~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   74 (125)
T cd07264           1 FGYTIIYVEDVEKTLEFYERAFGFERRFLHE--SGDY--GELETGE--TTLAFASHDLAESNLKGGFVKADPAQPPAGFE   74 (125)
T ss_pred             CceEEEEEcCHHHHHHHHHHhhCCeEEeecC--CCcE--EEecCCc--EEEEEEcccccccccccCccCCccccCCCcEE
Confidence            4799999999999999999999999865332  1111  1122221  111111110   00   0  001112234568


Q ss_pred             EEEEeCCHHHHHHHHHHcCCeeecCCeecCCCceEEEEEECCCCCEEEEEeC
Q 022818           96 FAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQR  147 (291)
Q Consensus        96 i~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~Dp~G~~iel~~~  147 (291)
                      ++|.|+|+++++++++++|+++..+|...++|... ++++||+||.+++++.
T Consensus        75 ~~~~v~di~~~~~~l~~~G~~~~~~~~~~~~g~~~-~~~~DPdG~~~~~~~~  125 (125)
T cd07264          75 IAFVTDDVAAAFARAVEAGAVLVSEPKEKPWGQTV-AYVRDINGFLIELCSP  125 (125)
T ss_pred             EEEEcCCHHHHHHHHHHcCCEeccCCccCCCCcEE-EEEECCCCCEEEEecC
Confidence            99999999999999999999998888888887764 8999999999999863

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd08351 ChaP_like ChaP, an enzyme involved in the biosynthesis of the antitumor agent chartreusin (cha); and similar proteins

Probab=99.67  E-value=3e-15  Score=110.27  Aligned_cols=112  Identities=19%  Similarity=0.308  Sum_probs=80.9

Q ss_pred             cceeeEEEEEEeCCHHHHHHHHHhhcCCEEEEEeecCCCceeEEEEecCCCCcceEEEeeecCCCCcccCCCCceEEEEE
Q 022818           20 DKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIA   99 (291)
Q Consensus        20 ~~~~i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~~~~i~~~   99 (291)
                      |..++.|+.|.|+|++++++||+++||++.....    +.  ..++..++   ...+.+....      ...+..|++|.
T Consensus         1 ~~~~~~hv~l~v~Dl~~s~~FY~~~lG~~~~~~~----~~--~~~~~~~~---~~~l~~~~~~------~~~~~~h~a~~   65 (123)
T cd08351           1 MTVTLNHTIVPARDREASAEFYAEILGLPWAKPF----GP--FAVVKLDN---GVSLDFAQPD------GEIPPQHYAFL   65 (123)
T ss_pred             CcceEeEEEEEcCCHHHHHHHHHHhcCCEeeecc----CC--EEEEEcCC---CcEEEEecCC------CCCCcceEEEE
Confidence            3578999999999999999999999999986532    11  22233222   1234333321      11245789988


Q ss_pred             eC--CHHHHHHHHHHcCCeeecCCeec-------CCCceEEEEEECCCCCEEEEEeC
Q 022818          100 TE--DVYKLVENIRAKGGNVTREPGPL-------KGGTTHIAFVKDPDGYIFELIQR  147 (291)
Q Consensus       100 v~--d~~~~~~~l~~~G~~~~~~~~~~-------~~g~~~~~~~~Dp~G~~iel~~~  147 (291)
                      ++  |+++++++|+++|+++...|...       .+|.+ .++|+||+||.|||++.
T Consensus        66 v~~~dl~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~g~~-~~~f~DPdG~~iEl~~~  121 (123)
T cd08351          66 VSEEEFDRIFARIRERGIDYWADPQRTEPGQINTNDGGR-GVYFLDPDGHLLEIITR  121 (123)
T ss_pred             eCHHHHHHHHHHHHHcCCceecCCcccccccccCCCCee-EEEEECCCCCEEEEEec
Confidence            86  69999999999999987766543       34444 59999999999999986

ChaP is an enzyme involved in the biosynthesis of the potent antitumor agent chartreusin (cha). Cha is an aromatic polyketide glycoside produced by Streptomyces chartreusis. ChaP may play a role as a meta-cleavage dioxygenase in the oxidative rearrangement of the anthracyclic polyketide. ChaP belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases.

>cd07240 ED_TypeI_classII_N N-terminal domain of type I, class II extradiol dioxygenases; non-catalytic domain

Probab=99.67  E-value=3.3e-15  Score=108.88  Aligned_cols=111  Identities=26%  Similarity=0.431  Sum_probs=84.5

Q ss_pred             eeeEEEEEEeCCHHHHHHHHHhhcCCEEEEEeecCCCceeEEEEecCCCCcceEEEeeecCCCCcccCCCCceEEEEEeC
Q 022818           22 RRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIATE  101 (291)
Q Consensus        22 ~~i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~~~~i~~~v~  101 (291)
                      ++++|+.|.|+|++++.+||+++|||++..+.+      ...++..+. ...+.+.+....       ..+..|++|.|.
T Consensus         1 ~~l~hv~l~v~d~~~~~~FY~~~lg~~~~~~~~------~~~~~~~~~-~~~~~~~~~~~~-------~~~~~h~~~~v~   66 (117)
T cd07240           1 RRIAYAELEVPDLERALEFYTDVLGLTVLDRDA------GSVYLRCSE-DDHHSLVLTEGD-------EPGVDALGFEVA   66 (117)
T ss_pred             CceeEEEEecCCHHHHHHHHHhccCcEEEeecC------CeEEEecCC-CCcEEEEEEeCC-------CCCceeEEEEcC
Confidence            579999999999999999999999999986542      235555442 223334333321       236789999997


Q ss_pred             ---CHHHHHHHHHHcCCeeecCCeecCCCceEEEEEECCCCCEEEEEeC
Q 022818          102 ---DVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQR  147 (291)
Q Consensus       102 ---d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~Dp~G~~iel~~~  147 (291)
                         ++++++++++++|+++...+...+++.. .+++.||+||++|++..
T Consensus        67 ~~~~v~~~~~~l~~~g~~~~~~~~~~~~~~~-~~~~~DP~G~~ie~~~~  114 (117)
T cd07240          67 SEEDLEALAAHLEAAGVAPEEASDPEPGVGR-GLRFQDPDGHLLELFVE  114 (117)
T ss_pred             CHHHHHHHHHHHHHcCCceEEcCccCCCCce-EEEEECCCCCEEEEEEc
Confidence               6899999999999998877665555544 48999999999999865

This family contains the N-terminal, non-catalytic, domain of type I, class II extradiol dioxygenases. Dioxygenases catalyze the incorporation of both atoms of molecular oxygen into substrates using a variety of reaction mechanisms, resulting in the cleavage of aromatic rings. Two major groups of dioxygenases have been identified according to the cleavage site; extradiol enzymes cleave the aromatic ring between a hydroxylated carbon and an adjacent non-hydroxylated carbon, whereas intradiol enzymes cleave the aromatic ring between two hydroxyl groups. Extradiol dioxygenases are classified into type I and type II enzymes. Type I extradiol dioxygenases include class I and class II enzymes. These two classes of enzymes show sequence similarity; the two-domain class II enzymes evolved from a class I enzyme through gene duplication. The extradiol dioxygenases represented in this fa

>cd07255 Glo_EDI_BRP_like_12 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.67  E-value=5e-15  Score=109.31  Aligned_cols=117  Identities=26%  Similarity=0.401  Sum_probs=83.5

Q ss_pred             eeeEEEEEEeCCHHHHHHHHHhhcCCEEEEEeecCCCceeEEEEecCCCCcceEEEeeecCCC-CcccCCCCceEEEEEe
Q 022818           22 RRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGV-TSYDIGTGFGHFAIAT  100 (291)
Q Consensus        22 ~~i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~~~~~g~~~~~i~~~v  100 (291)
                      ++|+||.|.|+|++++.+||+++|||++.....      ..+++..++  ....+.+...... .......+..|++|.|
T Consensus         1 ~~i~hi~l~v~d~~~~~~Fy~~~lG~~~~~~~~------~~~~l~~~~--~~~~l~l~~~~~~~~~~~~~~~~~hi~f~v   72 (125)
T cd07255           1 TRIGAVTLRVADLERSLAFYQDVLGLEVLERTD------STAVLGTGG--KRPLLVLEEDPDAPPAPPGATGLYHFAILL   72 (125)
T ss_pred             CEEEEEEEEECCHHHHHHHHHhccCcEEEEcCC------CEEEEecCC--CeEEEEEEeCCCCCcccCCCCcEEEEEEEC
Confidence            579999999999999999999999999986521      134555443  2233444433222 1122345788999999


Q ss_pred             C---CHHHHHHHHHHcCCeeecCCeecCCCceEEEEEECCCCCEEEEEeCCC
Q 022818          101 E---DVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRGP  149 (291)
Q Consensus       101 ~---d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~Dp~G~~iel~~~~~  149 (291)
                      +   ++++++++|.++|+++..+ .....  ...+|++||+||++|+....+
T Consensus        73 ~~~~~v~~~~~~l~~~g~~~~~~-~~~~~--~~~~~~~DPdG~~iEi~~~~~  121 (125)
T cd07255          73 PSRADLAAALRRLIELGIPLVGA-SDHLV--SEALYLSDPEGNGIEIYADRP  121 (125)
T ss_pred             CCHHHHHHHHHHHHHcCCceecc-ccccc--eeEEEEECCCCCEEEEEEecC
Confidence            7   4899999999999987543 22222  235899999999999987654

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd08347 PcpA_C_like C-terminal domain of Sphingobium chlorophenolicum 2,6-dichloro-p-hydroquinone 1,2-dioxygenase (PcpA), and similar proteins

Probab=99.67  E-value=1.4e-15  Score=116.51  Aligned_cols=117  Identities=16%  Similarity=0.118  Sum_probs=81.9

Q ss_pred             CceEEEeeeCChhhhHHHHHHhcCCeeeeeeccCCccceEEEeccccCCceeEEEEeeecCcce-eecCcceeEEEEEec
Q 022818          153 PLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTE-YTKGNAYAQVAISTD  231 (291)
Q Consensus       153 ~~~~v~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~-~~~~~~~~hi~~~v~  231 (291)
                      ++.||+|.|+|++++.+||+++|||++.....   .  .+.+...+. ..+..|.+........ .....++.|++|.|+
T Consensus         1 gl~HI~i~V~Dle~s~~FY~~~LG~~~~~~~~---~--~~~~~~~~~-~~~~~l~l~~~~~~~~~~~~~~~l~Hiaf~v~   74 (157)
T cd08347           1 GLHGVTLTVRDPEATAAFLTDVLGFREVGEEG---D--RVRLEEGGG-GPGAVVDVLEEPDQPRGRPGAGTVHHVAFRVP   74 (157)
T ss_pred             CcccEEEEeCCHHHHHHHHHHhcCCEEEeeeC---C--EEEEEecCC-CCCCEEEEEeCCCCCCCcccCCceEEEEEECC
Confidence            47899999999999999999999999876543   1  222222211 1245666655322211 122347889999999


Q ss_pred             c---hHHhHHHHHHHHHHhCCeeecCCccCCCCCceEEEEECCCCceEEEeech
Q 022818          232 D---VYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNE  282 (291)
Q Consensus       232 d---i~~~~~~l~~~~~~~G~~~~~~~~~~~~~~~~~~~~~DpdG~~iel~~~~  282 (291)
                      |   +++++++|    +++|+++. .+....+  .+.+||+||+||+|||++..
T Consensus        75 d~~dvd~~~~~L----~~~Gv~~~-~~~~~~~--~~s~yf~DPdG~~iEl~~~~  121 (157)
T cd08347          75 DDEELEAWKERL----EALGLPVS-GIVDRFY--FKSLYFREPGGILFEIATDG  121 (157)
T ss_pred             CHHHHHHHHHHH----HHCCCCcc-ccccccc--EEEEEEECCCCcEEEEEECC
Confidence            8   77777777    99999864 3333322  47899999999999999865

The C-terminal domain of Sphingobium chlorophenolicum (formerly Sphingomonas chlorophenolica) 2,6-dichloro-p-hydroquinone 1,2-dioxygenase (PcpA), and similar proteins. PcpA is a key enzyme in the pentachlorophenol (PCP) degradation pathway, catalyzing the conversion of 2,6-dichloro-p-hydroquinone to 2-chloromaleylacetate. This domain belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases.

>cd09014 BphC-JF8_C_like C-terminal, catalytic, domain of BphC_JF8, (2,3-dihydroxybiphenyl 1,2-dioxygenase) from Bacillus sp

Probab=99.67  E-value=2e-15  Score=116.97  Aligned_cols=120  Identities=20%  Similarity=0.197  Sum_probs=82.4

Q ss_pred             CCceEEEeeeCChhhhHHHHHHhcCCeeeeeeccCCccceEEEeccccCCceeEEEEeeecCcceeecCcceeEEEEEec
Q 022818          152 EPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTD  231 (291)
Q Consensus       152 ~~~~~v~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~hi~~~v~  231 (291)
                      .++.|++|.|+|++++.+||+++|||++......+.+.....++.....  ...+.+..  ...  ...+++.|++|.|+
T Consensus         5 ~~i~Hi~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~~~~--~~~i~l~~--~~~--~~~~~~~hiaf~v~   78 (166)
T cd09014           5 RRLDHVNLLASDVDANRDFMEEVLGFRLREQIRLDNGKEAGAWMSVSNK--VHDVAYTR--DPA--GARGRLHHLAYALD   78 (166)
T ss_pred             ceeeeEEEEcCCHHHHHHHHHHccCCEEEEEEecCCCceEEEEEeCCCC--ceeEEEec--CCC--CCCCCceEEEEECC
Confidence            4689999999999999999999999998765433322222334433221  22333322  111  12246789999998


Q ss_pred             chH---HhHHHHHHHHHHhCCeeecCCccCCCCCceEEEEECCCCceEEEeec
Q 022818          232 DVY---KSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDN  281 (291)
Q Consensus       232 di~---~~~~~l~~~~~~~G~~~~~~~~~~~~~~~~~~~~~DpdG~~iel~~~  281 (291)
                      |++   +++++|    +++|+++...|.........++|++||+||+|||++.
T Consensus        79 ~~~~l~~~~~~l----~~~Gv~i~~~p~~~~~~~~~~~y~~DPdG~~iEl~~~  127 (166)
T cd09014          79 TREDVLRAADIF----LENGIFIEAGPGKHGIQQTFFLYVYEPGGNRVELFGG  127 (166)
T ss_pred             CHHHHHHHHHHH----HHcCCccccCCcccCCCCceEEEEECCCCCEEEEEEc
Confidence            744   555566    9999998777766544334569999999999999987

JF8 and similar proteins. 2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC) catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, a key step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). BphC belongs to the type I extradiol dioxygenase family, which requires a metal ion in the active site in its catalytic mechanism. Polychlorinated biphenyl degrading bacteria demonstrate a multiplicity of BphCs. This subfamily of BphC is represented by the enzyme purified from the thermophilic biphenyl and naphthalene degrader, Bacillus sp. JF8. The members in this family of BphC enzymes may use either Mn(II) or Fe(II) as cofactors. The enzyme purified from Bacillus sp. JF8 is Mn(II)-dependent, however, the enzyme from Rhodococcus jostii RHAI has Fe(II) bound to it. BphC_JF8 is thermostable and its optimum activity is at 85 degrees C. Th

>cd07246 Glo_EDI_BRP_like_8 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.67  E-value=3.1e-15  Score=109.85  Aligned_cols=115  Identities=20%  Similarity=0.228  Sum_probs=84.3

Q ss_pred             EEeeeCChhhhHHHHHHhcCCeeeeeeccCCccceEEEeccccCCceeEEEEeeecCcc--eeecCcceeEEEEEecchH
Q 022818          157 VMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVT--EYTKGNAYAQVAISTDDVY  234 (291)
Q Consensus       157 v~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~--~~~~~~~~~hi~~~v~di~  234 (291)
                      ..|.|.|++++.+||+++||+++......+++......+..++    ..+.+....+..  ....+.+..|++|.|+|++
T Consensus         5 ~~l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~----~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~d~~   80 (122)
T cd07246           5 PYLIVRDAAAAIDFYKKAFGAEELERMPDDDGRVMHAELRIGD----SVLMLADEFPEHGSPASWGGTPVSLHLYVEDVD   80 (122)
T ss_pred             EEEEECCHHHHHHHHHHhhCCEEEEEEeCCCCCEEEEEEEECC----EEEEEecCCcccCCCCCCCCceEEEEEEeCCHH
Confidence            4589999999999999999999877655444433344344222    244444322110  1123346789999999999


Q ss_pred             HhHHHHHHHHHHhCCeeecCCccCCCCCceEEEEECCCCceEEEee
Q 022818          235 KSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVD  280 (291)
Q Consensus       235 ~~~~~l~~~~~~~G~~~~~~~~~~~~~~~~~~~~~DpdG~~iel~~  280 (291)
                      ++++++    ++.|+++..+|...++ +.+.++++||+||+|+|++
T Consensus        81 ~~~~~l----~~~G~~~~~~~~~~~~-g~~~~~~~DP~G~~~~l~~  121 (122)
T cd07246          81 ATFARA----VAAGATSVMPPADQFW-GDRYGGVRDPFGHRWWIAT  121 (122)
T ss_pred             HHHHHH----HHCCCeEecCcccccc-cceEEEEECCCCCEEEEec
Confidence            999999    9999999988876665 5689999999999999987

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The structures of this family demonstrate domain swapping, which is shared by glyoxalase I and antibiotic resistance proteins.

>cd07253 Glo_EDI_BRP_like_2 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.67  E-value=2.1e-15  Score=111.11  Aligned_cols=117  Identities=21%  Similarity=0.305  Sum_probs=82.7

Q ss_pred             CCceEEEeeeCChhhhHHHHHHhcCCeeeeeeccCCccceEEEeccccCCceeEEEEeeecCc---ceeecCcceeEEEE
Q 022818          152 EPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGV---TEYTKGNAYAQVAI  228 (291)
Q Consensus       152 ~~~~~v~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~---~~~~~~~~~~hi~~  228 (291)
                      .++.|+.|.|.|++++++||+++|||+.....+..  .+..+..+  +    ..+++......   .....+++..|++|
T Consensus         2 ~~l~hi~l~v~d~~~s~~Fy~~~lG~~~~~~~~~~--~~~~~~~~--~----~~~~l~~~~~~~~~~~~~~~~~~~hi~~   73 (125)
T cd07253           2 KRIDHVVLTVADIEATLDFYTRVLGMEVVRFGEEV--GRKALRFG--S----QKINLHPVGGEFEPAAGSPGPGSDDLCL   73 (125)
T ss_pred             cccceEEEEecCHHHHHHHHHHHhCceeecccccC--CceEEEeC--C----EEEEEecCCCccCcCccCCCCCCceEEE
Confidence            36899999999999999999999999977543221  12222222  1    34444332211   11123457889999


Q ss_pred             Eecc-hHHhHHHHHHHHHHhCCeeecCCccCCC--CCceEEEEECCCCceEEEee
Q 022818          229 STDD-VYKSAEVVNLVTQELGGKITRQPGSIPG--LNTKITSFVDPDGWKTVLVD  280 (291)
Q Consensus       229 ~v~d-i~~~~~~l~~~~~~~G~~~~~~~~~~~~--~~~~~~~~~DpdG~~iel~~  280 (291)
                      .+++ ++++++++    +++|+++...|...++  +.++.+||+|||||+|||++
T Consensus        74 ~~~~~~~~~~~~l----~~~G~~~~~~~~~~~~~~~~~~~~~~~DPdG~~ve~~~  124 (125)
T cd07253          74 ITEPPIDELVAHL----EAHGVPIEEGPVPRTGARGPITSVYFRDPDGNLIELSN  124 (125)
T ss_pred             EecccHHHHHHHH----HHCCceeecCcccccCCCCCccEEEEECCCCCEEEeee
Confidence            9975 88888888    9999998877765432  23478999999999999986

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>cd07246 Glo_EDI_BRP_like_8 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.67  E-value=4.7e-15  Score=108.86  Aligned_cols=116  Identities=21%  Similarity=0.207  Sum_probs=85.2

Q ss_pred             EEEEeCCHHHHHHHHHhhcCCEEEEEeecCCCceeEEEEecCCCCcceEEEeeecCC-CC-cccCCCCceEEEEEeCCHH
Q 022818           27 AVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYG-VT-SYDIGTGFGHFAIATEDVY  104 (291)
Q Consensus        27 v~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~-~~~~g~~~~~i~~~v~d~~  104 (291)
                      +.|.|+|++++.+||+++||++.......+++......+..++.  .  +.+..... .. ....+.+..|++|.|+|++
T Consensus         5 ~~l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~--~--~~l~~~~~~~~~~~~~~~~~~~~~~~v~d~~   80 (122)
T cd07246           5 PYLIVRDAAAAIDFYKKAFGAEELERMPDDDGRVMHAELRIGDS--V--LMLADEFPEHGSPASWGGTPVSLHLYVEDVD   80 (122)
T ss_pred             EEEEECCHHHHHHHHHHhhCCEEEEEEeCCCCCEEEEEEEECCE--E--EEEecCCcccCCCCCCCCceEEEEEEeCCHH
Confidence            46899999999999999999999876654444444445555432  2  22322211 11 1113346779999999999


Q ss_pred             HHHHHHHHcCCeeecCCeecCCCceEEEEEECCCCCEEEEEeC
Q 022818          105 KLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQR  147 (291)
Q Consensus       105 ~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~Dp~G~~iel~~~  147 (291)
                      ++++++.+.|+++..+|...++|.+. ++++||+|++|+|.+.
T Consensus        81 ~~~~~l~~~G~~~~~~~~~~~~g~~~-~~~~DP~G~~~~l~~~  122 (122)
T cd07246          81 ATFARAVAAGATSVMPPADQFWGDRY-GGVRDPFGHRWWIATH  122 (122)
T ss_pred             HHHHHHHHCCCeEecCcccccccceE-EEEECCCCCEEEEecC
Confidence            99999999999998888777777654 8999999999999863

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The structures of this family demonstrate domain swapping, which is shared by glyoxalase I and antibiotic resistance proteins.

>cd07252 BphC1-RGP6_N_like N-terminal domain of 2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC, EC 1

Probab=99.67  E-value=1.8e-15  Score=110.95  Aligned_cols=112  Identities=15%  Similarity=0.154  Sum_probs=78.6

Q ss_pred             CceEEEeeeCChhhhHHHHHHhcCCeeeeeeccCCccceEEEeccccCCceeEEEEeeecCcceeecCcceeEEEEEecc
Q 022818          153 PLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDD  232 (291)
Q Consensus       153 ~~~~v~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~hi~~~v~d  232 (291)
                      ++.||.|.|+|+++|.+||+++|||++..+..   ..  ..++..++.  +..+.+...       ..++..|++|.+++
T Consensus         2 ~l~~v~l~v~Dl~~s~~FY~~~LG~~~~~~~~---~~--~~~~~~~~~--~~~~~l~~~-------~~~~~~~~~f~v~~   67 (120)
T cd07252           2 SLGYLGVESSDLDAWRRFATDVLGLQVGDRPE---DG--ALYLRMDDR--AWRIAVHPG-------EADDLAYAGWEVAD   67 (120)
T ss_pred             cccEEEEEeCCHHHHHHHHHhccCceeccCCC---CC--eEEEEccCC--ceEEEEEeC-------CCCceeEEEEEECC
Confidence            58899999999999999999999999764421   11  223332222  444554321       12467899999975


Q ss_pred             ---hHHhHHHHHHHHHHhCCeeecCCcc--CCCCCceEEEEECCCCceEEEeech
Q 022818          233 ---VYKSAEVVNLVTQELGGKITRQPGS--IPGLNTKITSFVDPDGWKTVLVDNE  282 (291)
Q Consensus       233 ---i~~~~~~l~~~~~~~G~~~~~~~~~--~~~~~~~~~~~~DpdG~~iel~~~~  282 (291)
                         +++.+++|    +++|+++...|..  ...+.++++||+|||||.|||+...
T Consensus        68 ~~dl~~~~~~l----~~~Gv~~~~~~~~~~~~~~~~~~~~~~DPdG~~iE~~~~~  118 (120)
T cd07252          68 EAALDALAARL----RAAGVAVEEGSAELAAERGVEGLIRFADPDGNRHELFWGP  118 (120)
T ss_pred             HHHHHHHHHHH----HHcCCeEEEcCHHHHhhCCCcEEEEEECCCCCEEEEEecc
Confidence               66666777    9999998865532  1222347899999999999998653

13.11.39) 1 from Rhodococcus globerulus P6 (BphC1-RGP6) and similar proteins. This subfamily contains the N-terminal, non-catalytic, domain of BphC1-RGP6 and similar proteins. BphC catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). This subfamily of BphCs belongs to the type I extradiol dioxygenase family, which require a metal in the active site in its catalytic mechanism. Polychlorinated biphenyl degrading bacteria demonstrate a multiplicity of 2,3-dihydroxybiphenyl 1,2-dioxygenases. For example, three types of BphC enzymes have been found in Rhodococcus globerulus (BphC1-RGP6 - BphC3-RGP6), all three enzymes are type I extradiol dioxygenases. BphC1-RGP6 has an internal duplication, it is a two-domain dioxygenase which forms octamers, and has Fe(II) at the catalytic site. Its N-

>cd08361 PpCmtC_N N-terminal domain of 2,3-dihydroxy-p-cumate-3,4-dioxygenase (PpCmtC)

Probab=99.67  E-value=1.3e-15  Score=112.31  Aligned_cols=111  Identities=18%  Similarity=0.230  Sum_probs=78.5

Q ss_pred             CCceEEEeeeCChhhhHHHHHHhcCCeeeeeeccCCccceEEEeccccCCceeEEEEeeecCcceeecCcceeEEEEEec
Q 022818          152 EPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTD  231 (291)
Q Consensus       152 ~~~~~v~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~hi~~~v~  231 (291)
                      .++.||+|.|+|++++.+||+++|||++..+..      ...++..+..  +..+.+..  .      .++..|++|.|+
T Consensus         5 ~~l~~v~l~v~d~~~s~~FY~~vLG~~~~~~~~------~~~~l~~~~~--~~~i~l~~--~------~~~~~~iaf~v~   68 (124)
T cd08361           5 QDIAYVRLGTRDLAGATRFATDILGLQVAERTA------KATYFRSDAR--DHTLVYIE--G------DPAEQASGFELR   68 (124)
T ss_pred             EEeeEEEEeeCCHHHHHHHHHhccCceeccCCC------CeEEEEcCCc--cEEEEEEe--C------CCceEEEEEEEC
Confidence            468999999999999999999999999765421      1233443222  33444422  1      134579999998


Q ss_pred             c---hHHhHHHHHHHHHHhCCeeecCCccCC--CCCceEEEEECCCCceEEEeech
Q 022818          232 D---VYKSAEVVNLVTQELGGKITRQPGSIP--GLNTKITSFVDPDGWKTVLVDNE  282 (291)
Q Consensus       232 d---i~~~~~~l~~~~~~~G~~~~~~~~~~~--~~~~~~~~~~DpdG~~iel~~~~  282 (291)
                      |   ++++.+++    +++|+++...+....  .++.+++||+|||||.|||..+.
T Consensus        69 ~~~dv~~~~~~l----~~~G~~~~~~~~~~~~~~~~~~~~~f~DPdG~~iE~~~~~  120 (124)
T cd08361          69 DDDALESAATEL----EQYGHEVRRGTAEECELRKVKAFIAFRDPSGNSIELVVRP  120 (124)
T ss_pred             CHHHHHHHHHHH----HHcCCceEEcCHHHhhcCCcceEEEEECcCCCEEEEEEee
Confidence            6   66666777    999999876554211  22357789999999999998664

This subfamily contains the N-terminal, non-catalytic, domain of PpCmtC. 2,3-dihydroxy-p-cumate-3,4-dioxygenase (CmtC of Pseudomonas putida F1) is a dioxygenase involved in the eight-step catabolism pathway of p-cymene. CmtC acts upon the reaction intermediate 2,3-dihydroxy-p-cumate, yielding 2-hydroxy-3-carboxy-6-oxo-7-methylocta-2,4-dienoate. The CmtC belongs to the type I family of extradiol dioxygenases. Fe2+ was suggested as a cofactor, same as other enzymes in the family. The type I family of extradiol dioxygenases contains two structurally homologous barrel-shaped domains at the N- and C-terminal. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism.

>cd08346 PcpA_N_like N-terminal domain of Sphingobium chlorophenolicum 2,6-dichloro-p-hydroquinone 1,2-dioxygenase (PcpA), and similar proteins

Probab=99.67  E-value=3.2e-15  Score=110.30  Aligned_cols=120  Identities=22%  Similarity=0.296  Sum_probs=80.7

Q ss_pred             eeEEEEEEeCCHHHHHHHHHhhcCCEEEEEeecCCC-ceeEEEEecCCCCcceEEEeeecCCCCc--ccCCCCceEEEEE
Q 022818           23 RFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEE-KYSNAFLGFGPEQSHFVVELTYNYGVTS--YDIGTGFGHFAIA   99 (291)
Q Consensus        23 ~i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~--~~~g~~~~~i~~~   99 (291)
                      +|+||+|.|.|++++++||+++|||+...+....+. .....++..........+.+........  .....+..|++|.
T Consensus         1 ~i~hv~l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~hi~f~   80 (126)
T cd08346           1 GLHHVTLITRDAQETVDFYTDVLGLRLVKKTVNQDDPGTYHLFFGDGLGSPGTLLTFFEWPDAGPKGRRGPGQIHHIAFS   80 (126)
T ss_pred             CcccEEEEcCChhHhHHHHHHccCCEEeeeEeccCCCceEEEEEecCCCCCCCEEEEEecCCCCCCCCCCCCcEEEEEEE
Confidence            478999999999999999999999998876543322 1123334322111222344443322111  1123357899999


Q ss_pred             eC---CHHHHHHHHHHcCCeeecCCeecCCCceEEEEEECCCCCEEEEE
Q 022818          100 TE---DVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELI  145 (291)
Q Consensus       100 v~---d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~Dp~G~~iel~  145 (291)
                      |+   ++++++++++++|+++...+..  ++. ..++|+||+||+||++
T Consensus        81 v~~~~~~~~~~~~~~~~g~~~~~~~~~--~~~-~~~~~~DP~G~~iE~~  126 (126)
T cd08346          81 VPSEASLDAWRERLRAAGVPVSGVVDH--FGE-RSIYFEDPDGLRLELT  126 (126)
T ss_pred             cCCHHHHHHHHHHHHHcCCcccceEee--cce-EEEEEECCCCCEEEeC
Confidence            98   5799999999999987654332  333 3489999999999984

The N-terminal domain of Sphingobium chlorophenolicum (formerly Sphingomonas chlorophenolica) 2,6-dichloro-p-hydroquinone1,2-dioxygenase (PcpA), and similar proteins. PcpA is a key enzyme in the pentachlorophenol (PCP) degradation pathway, catalyzing the conversion of 2,6-dichloro-p-hydroquinone to 2-chloromaleylacetate. This domain belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases.

>cd07264 Glo_EDI_BRP_like_15 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.66  E-value=2.7e-15  Score=110.74  Aligned_cols=115  Identities=22%  Similarity=0.301  Sum_probs=79.8

Q ss_pred             ceEEEeeeCChhhhHHHHHHhcCCeeeeeeccCCccceEEEeccccCCceeEEEEeeec--------C--cceeecCcce
Q 022818          154 LCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNY--------G--VTEYTKGNAY  223 (291)
Q Consensus       154 ~~~v~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~--------~--~~~~~~~~~~  223 (291)
                      +.|+.|.|+|++++.+||+++|||++.....  +..+..  +..+    ...+.+....        .  +......++.
T Consensus         1 ~~~~~l~v~D~~~s~~FY~~~lG~~~~~~~~--~~~~~~--~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   72 (125)
T cd07264           1 FGYTIIYVEDVEKTLEFYERAFGFERRFLHE--SGDYGE--LETG----ETTLAFASHDLAESNLKGGFVKADPAQPPAG   72 (125)
T ss_pred             CceEEEEEcCHHHHHHHHHHhhCCeEEeecC--CCcEEE--ecCC----cEEEEEEcccccccccccCccCCccccCCCc
Confidence            4689999999999999999999999764322  111221  1111    1121111100        0  0001112344


Q ss_pred             eEEEEEecchHHhHHHHHHHHHHhCCeeecCCccCCCCCceEEEEECCCCceEEEeec
Q 022818          224 AQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDN  281 (291)
Q Consensus       224 ~hi~~~v~di~~~~~~l~~~~~~~G~~~~~~~~~~~~~~~~~~~~~DpdG~~iel~~~  281 (291)
                      .|++|.|+|++++++++    +++|+++..+|...++ |.+.++++|||||.|||+++
T Consensus        73 ~~~~~~v~di~~~~~~l----~~~G~~~~~~~~~~~~-g~~~~~~~DPdG~~~~~~~~  125 (125)
T cd07264          73 FEIAFVTDDVAAAFARA----VEAGAVLVSEPKEKPW-GQTVAYVRDINGFLIELCSP  125 (125)
T ss_pred             EEEEEEcCCHHHHHHHH----HHcCCEeccCCccCCC-CcEEEEEECCCCCEEEEecC
Confidence            69999999999999999    9999999988887776 45789999999999999874

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd07249 MMCE Methylmalonyl-CoA epimerase (MMCE)

Probab=99.66  E-value=2.5e-15  Score=111.24  Aligned_cols=118  Identities=28%  Similarity=0.488  Sum_probs=84.3

Q ss_pred             eEEEEEEeCCHHHHHHHHHhhcCCEEEEEeecC-CCceeEEEEecCCCCcceEEEeeecCCC-Cc-----ccCCCCceEE
Q 022818           24 FLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVP-EEKYSNAFLGFGPEQSHFVVELTYNYGV-TS-----YDIGTGFGHF   96 (291)
Q Consensus        24 i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~~-----~~~g~~~~~i   96 (291)
                      |+||.|.|+|++++.+||+++||++........ +.....+++..+    ...+.+..+... ..     ...+.+..|+
T Consensus         1 ~~hv~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~----~~~l~l~~~~~~~~~~~~~~~~~~~g~~h~   76 (128)
T cd07249           1 IDHIGIAVPDLEAAIKFYRDVLGVGPWEEEEVPPEQGVRVAFLGLG----NVQIELIEPLDDDSPIAKFLEKRGEGLHHI   76 (128)
T ss_pred             CcEEEEEeCCHHHHHHHHHHhhCCCCccccccCcccccEEEEEEcC----CEEEEEEEECCCCCcHHHHHhcCCCceEEE
Confidence            579999999999999999999999997755432 233445666543    223334332211 11     1246788999


Q ss_pred             EEEeCCHHHHHHHHHHcCCeeecCCeecCCCceEEEEEECC-C--CCEEEEEe
Q 022818           97 AIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDP-D--GYIFELIQ  146 (291)
Q Consensus        97 ~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~Dp-~--G~~iel~~  146 (291)
                      +|.|+|+++++++++++|+++..+|.....++.. +++.|| +  |++|||++
T Consensus        77 ~f~v~d~~~~~~~l~~~G~~~~~~~~~~~~~g~~-~~~~d~~~~~g~~iE~~~  128 (128)
T cd07249          77 AFEVDDIDAALARLKAQGVRLLQEGPRIGAGGKR-VAFLHPKDTGGVLIELVE  128 (128)
T ss_pred             EEEeCCHHHHHHHHHHCCCeeeccCCCccCCCCE-EEEEecCCCceEEEEecC
Confidence            9999999999999999999998877644444444 455555 4  99999975

MMCE, also called methylmalonyl-CoA racemase (EC 5.1.99.1) interconverts (2R)-methylmalonyl-CoA and (2S)-methylmalonyl-CoA. MMCE has been found in bacteria, archaea, and in animals. In eukaryotes, MMCE is an essential enzyme in a pathway that converts propionyl-CoA to succinyl-CoA, and is important in the breakdown of odd-chain length fatty acids, branched-chain amino acids, and other metabolites. In bacteria, MMCE participates in the reverse pathway for propionate fermentation, glyoxylate regeneration, and the biosynthesis of polyketide antibiotics. MMCE is closely related to glyoxalase I and type I extradiol dioxygenases.

>cd07258 PpCmtC_C C-terminal domain of 2,3-dihydroxy-p-cumate-3,4-dioxygenase (PpCmtC)

Probab=99.66  E-value=4.3e-15  Score=111.80  Aligned_cols=114  Identities=19%  Similarity=0.251  Sum_probs=83.3

Q ss_pred             EEEEEEeCCHHHHHHHHHhhcCCEEEEEeecCCCceeEEEEecCCCCcceEEEeeecCCCCcccCCCCceEEEEEeCC--
Q 022818           25 LHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIATED--  102 (291)
Q Consensus        25 ~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~~~~i~~~v~d--  102 (291)
                      .||.|.|+|++++.+||+++|||++..+..  .   ...++.......+..+.+...       ...+++|++|.|+|  
T Consensus         1 ~Hv~l~V~Dle~s~~Fy~~vLG~~~~~~~~--~---~~~~l~~~~~~~~h~~~~~~~-------~~~gl~Hiaf~v~~~~   68 (141)
T cd07258           1 GHVVIGSENFEASRDSLVEDFGFRVSDLIE--D---RIVFMRCHPNPFHHTFAVGPA-------SSSHFHHVNFMVTDID   68 (141)
T ss_pred             CcEEEecCCHHHHHHHHHhcCCCEeeeeeC--C---EEEEEEcCCCCCcceeeeccC-------CCCceEEEEEECCCHH
Confidence            499999999999999999999999876532  1   345665432222233322111       23489999999976  


Q ss_pred             -HHHHHHHHHHcCCeeecCCeecCCCceEEEEEECCCCCEEEEEeCCCC
Q 022818          103 -VYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRGPT  150 (291)
Q Consensus       103 -~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~Dp~G~~iel~~~~~~  150 (291)
                       +++++++|.++|+++...|...+.+...++|++||+|+.||+......
T Consensus        69 ~v~~~~~~l~~~G~~~~~~p~~~~~~~~~~~y~~DPdG~~iE~~~~~~~  117 (141)
T cd07258          69 DIGKALYRIKAHDVKVVFGPGRHPPSDSIFFYFLDPDGITVEYSFGMEE  117 (141)
T ss_pred             HHHHHHHHHHHCCCcEEeCCceECCCCCEEEEEECCCCCEEEEEeCcce
Confidence             467799999999998877766554454568999999999999887643

This subfamily contains the C-terminal, catalytic, domain of PpCmtC. 2,3-dihydroxy-p-cumate-3,4-dioxygenase (CmtC of Pseudomonas putida F1) is a dioxygenase involved in the eight-step catabolism pathway of p-cymene. CmtC acts upon the reaction intermediate 2,3-dihydroxy-p-cumate, yielding 2-hydroxy-3-carboxy-6-oxo-7-methylocta-2,4-dienoate. The CmtC belongs to the type I family of extradiol dioxygenases. Fe2+ was suggested as a cofactor, same as for other enzymes in the family. The type I family of extradiol dioxygenases contains two structurally homologous barrel-shaped domains at the N- and C-terminal. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism.

>cd08359 Glo_EDI_BRP_like_22 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.66  E-value=3.9e-15  Score=108.92  Aligned_cols=112  Identities=22%  Similarity=0.235  Sum_probs=79.9

Q ss_pred             EEEEEEeCCHHHHHHHHHhhcCCEEEEEeecCCCceeEEEEecCCCCcceEEEeeecCCCC-----cccCCCCceEEEEE
Q 022818           25 LHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVT-----SYDIGTGFGHFAIA   99 (291)
Q Consensus        25 ~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~-----~~~~g~~~~~i~~~   99 (291)
                      -+..|.|+|++++.+||+++|||+......      ....+..++.  .+.+.+.......     ....+ ...|++|.
T Consensus         3 ~~~~l~v~D~~~s~~FY~~~lG~~~~~~~~------~~~~~~~~~~--~~~l~l~~~~~~~~~~~~~~~~~-~~~~~~~~   73 (119)
T cd08359           3 LYPVIVTDDLAETADFYVRHFGFTVVFDSD------WYVSLRSPDG--GVELAFMLPGHETVPAAQYQFQG-QGLILNFE   73 (119)
T ss_pred             ceeEEEECCHHHHHHHHHHhhCcEEEeccC------cEEEEecCCC--ceEEEEccCCCCCCcchhcccCC-ceEEEEEE
Confidence            367899999999999999999999875421      1233433322  2333332221111     11122 33489999


Q ss_pred             eCCHHHHHHHHHHcCCeeecCCeecCCCceEEEEEECCCCCEEEEEe
Q 022818          100 TEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQ  146 (291)
Q Consensus       100 v~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~Dp~G~~iel~~  146 (291)
                      |+|++++++++.++|+++..+|...++|.+. ++++||+||+|+|+|
T Consensus        74 v~did~~~~~l~~~G~~~~~~~~~~~~g~~~-~~~~DP~G~~ie~~~  119 (119)
T cd08359          74 VDDVDAEYERLKAEGLPIVLPLRDEPWGQRH-FIVRDPNGVLIDIVQ  119 (119)
T ss_pred             ECCHHHHHHHHHhcCCCeeeccccCCCcceE-EEEECCCCCEEEEEC
Confidence            9999999999999999988888877777554 889999999999985

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The structures of this family demonstrate domain swapping, which is shared by glyoxalase I and antibiotic resistance proteins.

>cd07266 HPCD_N_class_II N-terminal domain of 3,4-dihydroxyphenylacetate 2,3-dioxygenase (HPCD); belongs to the type I class II family of extradiol dioxygenases

Probab=99.66  E-value=1.8e-15  Score=111.05  Aligned_cols=113  Identities=26%  Similarity=0.222  Sum_probs=78.6

Q ss_pred             CCceEEEeeeCChhhhHHHHHHhcCCeeeeeeccCCccceEEEeccccCCceeEEEEeeecCcceeecCcceeEEEEEec
Q 022818          152 EPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTD  231 (291)
Q Consensus       152 ~~~~~v~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~hi~~~v~  231 (291)
                      .++.|+.|.|+|++++.+||+++|||++.....    .  ..++..........+.+..       ...++..|++|.|.
T Consensus         3 ~~i~hi~l~v~d~~~~~~Fy~~~lG~~~~~~~~----~--~~~~~~~~~~~~~~~~~~~-------~~~~~~~hi~~~v~   69 (121)
T cd07266           3 LRLGHVELRVTDLEKSREFYVDVLGLVETEEDD----D--RIYLRGLEEFIHHSLVLTK-------APVAGLGHIAFRVR   69 (121)
T ss_pred             ceeeEEEEEcCCHHHHHHHHHhccCCEEeccCC----C--eEEEEecCCCceEEEEEee-------CCCCceeEEEEECC
Confidence            478999999999999999999999999765421    1  2223211111223333322       12246789999995


Q ss_pred             ---chHHhHHHHHHHHHHhCCeeecCCccCCCCCceEEEEECCCCceEEEeec
Q 022818          232 ---DVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDN  281 (291)
Q Consensus       232 ---di~~~~~~l~~~~~~~G~~~~~~~~~~~~~~~~~~~~~DpdG~~iel~~~  281 (291)
                         |++++++++    +++|+++...|.....+.++.+|+.|||||+|||+..
T Consensus        70 ~~~dv~~~~~~l----~~~g~~~~~~~~~~~~~~~~~~~~~DPdG~~ve~~~~  118 (121)
T cd07266          70 SEEDLDKAEAFF----QELGLPTEWVEAGEEPGQGRALRVEDPLGFPIEFYAE  118 (121)
T ss_pred             CHHHHHHHHHHH----HHcCCCcccccCCcCCCCccEEEEECCCCCEEEEEec
Confidence               566677777    9999998766544333335789999999999999864

This subfamily contains the N-terminal, non-catalytic, domain of HPCD. HPCD catalyses the second step in the degradation of 4-hydroxyphenylacetate to succinate and pyruvate. The aromatic ring of 4-hydroxyphenylacetate is opened by this dioxygenase to yield the 3,4-diol product, 2-hydroxy-5-carboxymethylmuconate semialdehyde. HPCD is a homotetramer and each monomer contains two structurally homologous barrel-shaped domains at the N- and C-terminus. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism. Most extradiol dioxygenases contain Fe(II) in their active site, but HPCD can be activated by either Mn(II) or Fe(II). These enzymes belong to the type I class II family of extradiol dioxygenases. The class III 3,4-dihydroxyphenylacetate 2,3-dioxygenases belong to a differ

>cd08359 Glo_EDI_BRP_like_22 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.66  E-value=3e-15  Score=109.52  Aligned_cols=112  Identities=20%  Similarity=0.207  Sum_probs=79.2

Q ss_pred             EEEeeeCChhhhHHHHHHhcCCeeeeeeccCCccceEEEeccccCCceeEEEEeeecCcc----eeecCcceeEEEEEec
Q 022818          156 QVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVT----EYTKGNAYAQVAISTD  231 (291)
Q Consensus       156 ~v~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~----~~~~~~~~~hi~~~v~  231 (291)
                      +..|.|.|++++.+||+++|||++.....    .+  ..+..++.  ...+.+.......    .........|++|.|+
T Consensus         4 ~~~l~v~D~~~s~~FY~~~lG~~~~~~~~----~~--~~~~~~~~--~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~v~   75 (119)
T cd08359           4 YPVIVTDDLAETADFYVRHFGFTVVFDSD----WY--VSLRSPDG--GVELAFMLPGHETVPAAQYQFQGQGLILNFEVD   75 (119)
T ss_pred             eeEEEECCHHHHHHHHHHhhCcEEEeccC----cE--EEEecCCC--ceEEEEccCCCCCCcchhcccCCceEEEEEEEC
Confidence            56899999999999999999999775421    12  22322221  2334332211110    0111123359999999


Q ss_pred             chHHhHHHHHHHHHHhCCeeecCCccCCCCCceEEEEECCCCceEEEee
Q 022818          232 DVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVD  280 (291)
Q Consensus       232 di~~~~~~l~~~~~~~G~~~~~~~~~~~~~~~~~~~~~DpdG~~iel~~  280 (291)
                      |++++++++    +++|+++..+|...++ +.+.++++||+||+|||+|
T Consensus        76 did~~~~~l----~~~G~~~~~~~~~~~~-g~~~~~~~DP~G~~ie~~~  119 (119)
T cd08359          76 DVDAEYERL----KAEGLPIVLPLRDEPW-GQRHFIVRDPNGVLIDIVQ  119 (119)
T ss_pred             CHHHHHHHH----HhcCCCeeeccccCCC-cceEEEEECCCCCEEEEEC
Confidence            999999999    9999998888887776 4689999999999999986

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The structures of this family demonstrate domain swapping, which is shared by glyoxalase I and antibiotic resistance proteins.

>cd07267 THT_Oxygenase_N N-terminal domain of 2,4,5-trihydroxytoluene (THT) oxygenase

Probab=99.66  E-value=6.6e-15  Score=106.74  Aligned_cols=110  Identities=22%  Similarity=0.319  Sum_probs=80.0

Q ss_pred             ceeeEEEEEEeCCHHHHHHHHHhhcCCEEEEEeecCCCceeEEEEecCCCCcceEEEeeecCCCCcccCCCCceEEEEEe
Q 022818           21 KRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIAT  100 (291)
Q Consensus        21 ~~~i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~~~~i~~~v  100 (291)
                      +++++|+.|.|+|++++.+||++ |||+...+..  +    ..++..++. ..+.+.....       ...++.|++|.|
T Consensus         1 ~~~l~hv~l~v~Dl~~s~~FY~~-lGl~~~~~~~--~----~~~~~~~~~-~~~~~~~~~~-------~~~~~~~~af~v   65 (113)
T cd07267           1 LTDIAHVRFEHPDLDKAERFLTD-FGLEVAARTD--D----ELYYRGYGT-DPFVYVARKG-------EKARFVGAAFEA   65 (113)
T ss_pred             CcEEEEEEEccCCHHHHHHHHHH-cCCEEEEecC--C----eEEEecCCC-ccEEEEcccC-------CcCcccEEEEEE
Confidence            57899999999999999999999 9999865432  1    244543222 2222222111       124678999999


Q ss_pred             CCHHHHHHHHHHcCCeeecCCeecCCCceEEEEEECCCCCEEEEEeC
Q 022818          101 EDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQR  147 (291)
Q Consensus       101 ~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~Dp~G~~iel~~~  147 (291)
                      +|.+++.+.+++.|......+. .+++.. .++|.||+||.|||+..
T Consensus        66 ~~~~~~~~~~~~~g~~~~~~~~-~~~~~~-~~~~~DPdG~~iEl~~~  110 (113)
T cd07267          66 ASRADLEKAAALPGASVIDDLE-APGGGK-RVTLTDPDGFPVELVYG  110 (113)
T ss_pred             CCHHHHHHHHHcCCCeeecCCC-CCCCce-EEEEECCCCCEEEEEec
Confidence            9999999999999998765432 444444 48999999999999875

This subfamily contains the N-terminal, non-catalytic, domain of THT oxygenase. THT oxygenase is an extradiol dioxygenase in the 2,4-dinitrotoluene (DNT) degradation pathway. It catalyzes the conversion of 2,4,5-trihydroxytoluene to an unstable ring fission product, 2,4-dihydroxy-5-methyl-6-oxo-2,4-hexadienoic acid. The native protein was determined to be a dimer by gel filtration. The enzyme belongs to the type I family of extradiol dioxygenases which contains two structurally homologous barrel-shaped domains at the N- and C-terminus of each monomer. The active-site metal is located in the C-terminal barrel. Fe(II) is required for its catalytic activity.

>cd08346 PcpA_N_like N-terminal domain of Sphingobium chlorophenolicum 2,6-dichloro-p-hydroquinone 1,2-dioxygenase (PcpA), and similar proteins

Probab=99.66  E-value=2.5e-15  Score=110.91  Aligned_cols=120  Identities=18%  Similarity=0.227  Sum_probs=79.9

Q ss_pred             CceEEEeeeCChhhhHHHHHHhcCCeeeeeeccCCc-cceEEEeccccCCceeEEEEeeecCcce--eecCcceeEEEEE
Q 022818          153 PLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEY-KYTLAMLGYAEEDQTTVLELTYNYGVTE--YTKGNAYAQVAIS  229 (291)
Q Consensus       153 ~~~~v~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~l~~~~~~~~--~~~~~~~~hi~~~  229 (291)
                      ++.|+.|.|.|++++++||+++|||++.......+. .....++.......+..+++........  .....+..|++|.
T Consensus         1 ~i~hv~l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~hi~f~   80 (126)
T cd08346           1 GLHHVTLITRDAQETVDFYTDVLGLRLVKKTVNQDDPGTYHLFFGDGLGSPGTLLTFFEWPDAGPKGRRGPGQIHHIAFS   80 (126)
T ss_pred             CcccEEEEcCChhHhHHHHHHccCCEEeeeEeccCCCceEEEEEecCCCCCCCEEEEEecCCCCCCCCCCCCcEEEEEEE
Confidence            378999999999999999999999998766543221 1122223322111234566654322211  1122367899999


Q ss_pred             ecc---hHHhHHHHHHHHHHhCCeeecCCccCCCCCceEEEEECCCCceEEEe
Q 022818          230 TDD---VYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLV  279 (291)
Q Consensus       230 v~d---i~~~~~~l~~~~~~~G~~~~~~~~~~~~~~~~~~~~~DpdG~~iel~  279 (291)
                      |+|   ++++++++    +++|+++...+..   .+.+.+||+||+||+|||+
T Consensus        81 v~~~~~~~~~~~~~----~~~g~~~~~~~~~---~~~~~~~~~DP~G~~iE~~  126 (126)
T cd08346          81 VPSEASLDAWRERL----RAAGVPVSGVVDH---FGERSIYFEDPDGLRLELT  126 (126)
T ss_pred             cCCHHHHHHHHHHH----HHcCCcccceEee---cceEEEEEECCCCCEEEeC
Confidence            985   46666666    9999998654433   2358899999999999985

The N-terminal domain of Sphingobium chlorophenolicum (formerly Sphingomonas chlorophenolica) 2,6-dichloro-p-hydroquinone1,2-dioxygenase (PcpA), and similar proteins. PcpA is a key enzyme in the pentachlorophenol (PCP) degradation pathway, catalyzing the conversion of 2,6-dichloro-p-hydroquinone to 2-chloromaleylacetate. This domain belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases.

>cd07245 Glo_EDI_BRP_like_9 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.65  E-value=2.1e-15  Score=109.01  Aligned_cols=113  Identities=26%  Similarity=0.312  Sum_probs=80.3

Q ss_pred             eEEEEEEeCCHHHHHHHHHhhcCCEEEEEeecCCCceeEEEEecCCCCcceEEEeeecCCCCc-ccCCCCceEEEEEeCC
Q 022818           24 FLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTS-YDIGTGFGHFAIATED  102 (291)
Q Consensus        24 i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~-~~~g~~~~~i~~~v~d  102 (291)
                      |+|++|.|+|++++.+||+++||++...+...+.   ...++..++.   ..+.+........ ...+.+..|++|.|+|
T Consensus         1 i~Hi~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~---~~~~~~~~~~---~~i~l~~~~~~~~~~~~~~~~~~~~~~v~d   74 (114)
T cd07245           1 LDHVALRVPDLEASRAFYTDVLGLEEGPRPPFLF---PGAWLYAGDG---PQLHLIEEDPPDALPEGPGRDDHIAFRVDD   74 (114)
T ss_pred             CCeEEEecCCHHHHHHHHHHccCCcccCcCCCCC---CceEEEeCCC---cEEEEEecCCCccccCCCcccceEEEEeCC
Confidence            5899999999999999999999999875433221   2345544432   1233333222111 1133467899999999


Q ss_pred             HHHHHHHHHHcCCeeecCCeecCCCceEEEEEECCCCCEEEE
Q 022818          103 VYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFEL  144 (291)
Q Consensus       103 ~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~Dp~G~~iel  144 (291)
                      +++++++++++|+++...+.. .++.. .+++.||+|++||+
T Consensus        75 ~~~~~~~l~~~g~~~~~~~~~-~~~~~-~~~~~DP~G~~iE~  114 (114)
T cd07245          75 LDAFRARLKAAGVPYTESDVP-GDGVR-QLFVRDPDGNRIEL  114 (114)
T ss_pred             HHHHHHHHHHcCCCcccccCC-CCCcc-EEEEECCCCCEEeC
Confidence            999999999999998876654 33443 48999999999985

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases.

>cd07239 BphC5-RK37_C_like C-terminal, catalytic, domain of BphC5 (2,3-dihydroxybiphenyl 1,2-dioxygenase) from Bacterium Rhodococcus rhodochrous K37 and similar proteins

Probab=99.65  E-value=6.4e-15  Score=111.40  Aligned_cols=114  Identities=20%  Similarity=0.407  Sum_probs=82.9

Q ss_pred             eeeEEEEEEeCCHHHHHHHHHhhcCCEEEEEeecCCCceeEEEEecCCCCcceEEEeeecCCCCcccCCCCceEEEEEeC
Q 022818           22 RRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIATE  101 (291)
Q Consensus        22 ~~i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~~~~i~~~v~  101 (291)
                      .+++|+.|.|+|++++.+||+++|||+......  +   ...++..++...  .+.+...       ...+..|++|.|+
T Consensus         3 ~~l~Hv~i~V~Dle~s~~FY~~~LG~~~~~~~~--~---~~~~l~~~~~~~--~~~l~~~-------~~~~~~hiaf~v~   68 (144)
T cd07239           3 VKISHVVLNSPDVDKTVAFYEDVLGFRVSDWLG--D---QMAFLRCNSDHH--SIAIARG-------PHPSLNHVAFEMP   68 (144)
T ss_pred             ceeeEEEEECCCHHHHHHHHHhcCCCEEEEeeC--C---eEEEEECCCCcc--eEEEccC-------CCCceEEEEEECC
Confidence            478999999999999999999999999864422  1   235565543322  2333221       1247889999999


Q ss_pred             CHHHHH---HHHHHcCCeeecCCeecCCCceEEEEEECCCCCEEEEEeCCC
Q 022818          102 DVYKLV---ENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRGP  149 (291)
Q Consensus       102 d~~~~~---~~l~~~G~~~~~~~~~~~~g~~~~~~~~Dp~G~~iel~~~~~  149 (291)
                      |++++.   ++|+++|+++...+.....+...++||+||+||.|||++...
T Consensus        69 d~~~l~~~~~~l~~~Gi~~~~~~~~~~~~~~~~~yf~DPdG~~iE~~~~~~  119 (144)
T cd07239          69 SIDEVMRGIGRMIDKGIDILWGPGRHGPGDNTFAYFLDPGGFVIEYTSELE  119 (144)
T ss_pred             CHHHHHHHHHHHHHcCCceeeCCcccCCCCCEEEEEECCCCcEEEeccCce
Confidence            877764   899999999876654433333445899999999999998753

2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC) catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). The enzyme contains a N-terminal and a C-terminal domain of similar structure fold, resulting from an ancient gene duplication. BphC belongs to the type I extradiol dioxygenase family, which requires a metal in the active site for its catalytic activity. Polychlorinated biphenyl degrading bacteria demonstrate multiplicity of BphCs. Bacterium Rhodococcus rhodochrous K37 has eight genes encoding BphC enzymes. This family includes the C-terminal domain of BphC5-RrK37. The crystal structure of the protein from Novosphingobium aromaticivorans has a Mn(II)in the active site, although most proteins of type I extradiol dio

>cd07252 BphC1-RGP6_N_like N-terminal domain of 2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC, EC 1

Probab=99.65  E-value=4.3e-15  Score=108.97  Aligned_cols=113  Identities=18%  Similarity=0.249  Sum_probs=81.2

Q ss_pred             eeeEEEEEEeCCHHHHHHHHHhhcCCEEEEEeecCCCceeEEEEecCCCCcceEEEeeecCCCCcccCCCCceEEEEEeC
Q 022818           22 RRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIATE  101 (291)
Q Consensus        22 ~~i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~~~~i~~~v~  101 (291)
                      .+|.||+|.|+|+++|.+||+++|||++..+..  .   ...++..++.  ++.+.+....       ..+..|++|.+.
T Consensus         1 ~~l~~v~l~v~Dl~~s~~FY~~~LG~~~~~~~~--~---~~~~~~~~~~--~~~~~l~~~~-------~~~~~~~~f~v~   66 (120)
T cd07252           1 KSLGYLGVESSDLDAWRRFATDVLGLQVGDRPE--D---GALYLRMDDR--AWRIAVHPGE-------ADDLAYAGWEVA   66 (120)
T ss_pred             CcccEEEEEeCCHHHHHHHHHhccCceeccCCC--C---CeEEEEccCC--ceEEEEEeCC-------CCceeEEEEEEC
Confidence            368999999999999999999999999864421  1   1345554332  3444443221       236789999996


Q ss_pred             ---CHHHHHHHHHHcCCeeecCCeec--CCCceEEEEEECCCCCEEEEEeCC
Q 022818          102 ---DVYKLVENIRAKGGNVTREPGPL--KGGTTHIAFVKDPDGYIFELIQRG  148 (291)
Q Consensus       102 ---d~~~~~~~l~~~G~~~~~~~~~~--~~g~~~~~~~~Dp~G~~iel~~~~  148 (291)
                         |+++++++|+++|+++...+...  ..+...+++|+|||||.|||....
T Consensus        67 ~~~dl~~~~~~l~~~Gv~~~~~~~~~~~~~~~~~~~~~~DPdG~~iE~~~~~  118 (120)
T cd07252          67 DEAALDALAARLRAAGVAVEEGSAELAAERGVEGLIRFADPDGNRHELFWGP  118 (120)
T ss_pred             CHHHHHHHHHHHHHcCCeEEEcCHHHHhhCCCcEEEEEECCCCCEEEEEecc
Confidence               58999999999999987654321  223334589999999999998764

13.11.39) 1 from Rhodococcus globerulus P6 (BphC1-RGP6) and similar proteins. This subfamily contains the N-terminal, non-catalytic, domain of BphC1-RGP6 and similar proteins. BphC catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). This subfamily of BphCs belongs to the type I extradiol dioxygenase family, which require a metal in the active site in its catalytic mechanism. Polychlorinated biphenyl degrading bacteria demonstrate a multiplicity of 2,3-dihydroxybiphenyl 1,2-dioxygenases. For example, three types of BphC enzymes have been found in Rhodococcus globerulus (BphC1-RGP6 - BphC3-RGP6), all three enzymes are type I extradiol dioxygenases. BphC1-RGP6 has an internal duplication, it is a two-domain dioxygenase which forms octamers, and has Fe(II) at the catalytic site. Its N-

>PF12681 Glyoxalase_2: Glyoxalase-like domain; PDB: 3G12_B 1JIF_B 1JIE_B 1QTO_A 3OXH_A 2PJS_A 2RBB_A 3SK1_B 3SK2_B 3RRI_A

Probab=99.65  E-value=2.8e-15  Score=107.65  Aligned_cols=108  Identities=26%  Similarity=0.334  Sum_probs=76.5

Q ss_pred             eeeCChhhhHHHHHHhcCCeeeeeeccCCccceEEEeccccCCceeEEEEeeecCcceeecCcceeEEEEEecchHHhHH
Q 022818          159 LRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDVYKSAE  238 (291)
Q Consensus       159 l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~hi~~~v~di~~~~~  238 (291)
                      |.|+|++++++||+++|||++....+    .+..+..+  .........+.....  ......+..|++|.|+|++++++
T Consensus         1 l~v~d~~~a~~FY~~~lg~~~~~~~~----~~~~~~~~--~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~v~dv~~~~~   72 (108)
T PF12681_consen    1 LPVSDLEAAAAFYEDVLGFEVVFDDP----DYVDFSLG--FRFHDGVIEFLQFPD--PPGPPGGGFHLCFEVEDVDALYE   72 (108)
T ss_dssp             EEESSHHHHHHHHHHTTTSEEEEEET----SEEEEEET--EEEEEEEEEEEEEES--SSSSSSSEEEEEEEESHHHHHHH
T ss_pred             CccCCHHHHHHHHHHhcCCEEEEeCC----CeEEEEec--cchhhhhHHHccCCc--cccCCCceeEEEEEEcCHHHHHH
Confidence            68999999999999999999887332    12233222  110011222222211  11234578999999999999999


Q ss_pred             HHHHHHHHhCCeeecCCccCCCCCceEEEEECCCCceEEEe
Q 022818          239 VVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLV  279 (291)
Q Consensus       239 ~l~~~~~~~G~~~~~~~~~~~~~~~~~~~~~DpdG~~iel~  279 (291)
                      ++    +++|+++..+|...++ +.+.+++.|||||+|||+
T Consensus        73 ~l----~~~G~~~~~~~~~~~~-g~~~~~~~DPdG~~ie~~  108 (108)
T PF12681_consen   73 RL----KELGAEIVTEPRDDPW-GQRSFYFIDPDGNRIEFC  108 (108)
T ss_dssp             HH----HHTTSEEEEEEEEETT-SEEEEEEE-TTS-EEEEE
T ss_pred             HH----HHCCCeEeeCCEEcCC-CeEEEEEECCCCCEEEeC
Confidence            99    9999999999888777 468999999999999986

...

>cd07242 Glo_EDI_BRP_like_6 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.65  E-value=7e-15  Score=109.02  Aligned_cols=117  Identities=24%  Similarity=0.271  Sum_probs=82.8

Q ss_pred             CceEEEeeeCChhhhHHHHHHhc---CCeeeeeeccCCccceEEEeccccCCceeEEEEeeecCcce---eecCcceeEE
Q 022818          153 PLCQVMLRVGDLGRSIKFYEKAL---GMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTE---YTKGNAYAQV  226 (291)
Q Consensus       153 ~~~~v~l~v~d~~~~~~fy~~~l---G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~---~~~~~~~~hi  226 (291)
                      ++.||.|.|.|++++.+||+++|   ||++....+  + ...+...   .  .+..+.+.......+   ...++++.|+
T Consensus         1 ~i~Hv~i~v~d~~~~~~Fy~~~l~~~G~~~~~~~~--~-~~~~~~~---~--~~~~i~l~~~~~~~~~~~~~~~~g~~hi   72 (128)
T cd07242           1 GIHHVELTVRDLERSRAFYDWLLGLLGFEEVKEWE--D-GRSWRAG---D--GGTYLVLQQADGESAGRHDRRNPGLHHL   72 (128)
T ss_pred             CCceEEEEeCCHHHHHHHHHHHHhhcCCEEEEeec--c-CceEEec---C--CceEEEEEecccCCCcccccCCcCeeEE
Confidence            47899999999999999999999   999876542  1 1122221   1  135566654333221   1234578899


Q ss_pred             EEEecc---hHHhHHHHHHHHHHhCCeeecCCccC--CCCCceEEEEECCCCceEEEeec
Q 022818          227 AISTDD---VYKSAEVVNLVTQELGGKITRQPGSI--PGLNTKITSFVDPDGWKTVLVDN  281 (291)
Q Consensus       227 ~~~v~d---i~~~~~~l~~~~~~~G~~~~~~~~~~--~~~~~~~~~~~DpdG~~iel~~~  281 (291)
                      +|.|++   +++++++|    +++|+++...+...  ...+.+.+|++||+||+|||+.+
T Consensus        73 a~~v~~~~d~~~~~~~l----~~~g~~~~~~~~~~~~~~~~~~~~~~~DpdG~~ie~~~~  128 (128)
T cd07242          73 AFRAPSREAVDELYARL----AKRGAEILYAPREPYAGGPGYYALFFEDPDGIRLELVAP  128 (128)
T ss_pred             EEEcCCHHHHHHHHHHH----HHcCCeEecCCcccccCCCcEEEEEEECCCCcEEEEEeC
Confidence            999975   67777777    99999998877642  12245789999999999999853

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>cd07255 Glo_EDI_BRP_like_12 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.65  E-value=5.8e-15  Score=108.96  Aligned_cols=117  Identities=23%  Similarity=0.319  Sum_probs=81.1

Q ss_pred             CCceEEEeeeCChhhhHHHHHHhcCCeeeeeeccCCccceEEEeccccCCceeEEEEeeecCcc-eeecCcceeEEEEEe
Q 022818          152 EPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVT-EYTKGNAYAQVAIST  230 (291)
Q Consensus       152 ~~~~~v~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~-~~~~~~~~~hi~~~v  230 (291)
                      +++.|+.|.|.|++++.+||+++|||++....+      ..+.+..++  ....+.+....... ......+..|++|.|
T Consensus         1 ~~i~hi~l~v~d~~~~~~Fy~~~lG~~~~~~~~------~~~~l~~~~--~~~~l~l~~~~~~~~~~~~~~~~~hi~f~v   72 (125)
T cd07255           1 TRIGAVTLRVADLERSLAFYQDVLGLEVLERTD------STAVLGTGG--KRPLLVLEEDPDAPPAPPGATGLYHFAILL   72 (125)
T ss_pred             CEEEEEEEEECCHHHHHHHHHhccCcEEEEcCC------CEEEEecCC--CeEEEEEEeCCCCCcccCCCCcEEEEEEEC
Confidence            368999999999999999999999999876521      233344322  23455554432211 122345788999999


Q ss_pred             cc---hHHhHHHHHHHHHHhCCeeecCCccCCCCCceEEEEECCCCceEEEeechh
Q 022818          231 DD---VYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNED  283 (291)
Q Consensus       231 ~d---i~~~~~~l~~~~~~~G~~~~~~~~~~~~~~~~~~~~~DpdG~~iel~~~~~  283 (291)
                      ++   ++++++++    +++|+++.. +...+.  .+.+||+|||||+|||....+
T Consensus        73 ~~~~~v~~~~~~l----~~~g~~~~~-~~~~~~--~~~~~~~DPdG~~iEi~~~~~  121 (125)
T cd07255          73 PSRADLAAALRRL----IELGIPLVG-ASDHLV--SEALYLSDPEGNGIEIYADRP  121 (125)
T ss_pred             CCHHHHHHHHHHH----HHcCCceec-cccccc--eeEEEEECCCCCEEEEEEecC
Confidence            85   56666666    999998754 333333  378999999999999987654

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd07245 Glo_EDI_BRP_like_9 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.65  E-value=2.1e-15  Score=109.05  Aligned_cols=113  Identities=23%  Similarity=0.136  Sum_probs=80.3

Q ss_pred             ceEEEeeeCChhhhHHHHHHhcCCeeeeeeccCCccceEEEeccccCCceeEEEEeeecCcce-eecCcceeEEEEEecc
Q 022818          154 LCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTE-YTKGNAYAQVAISTDD  232 (291)
Q Consensus       154 ~~~v~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~-~~~~~~~~hi~~~v~d  232 (291)
                      |+|++|.|+|++++.+||+++||+++........   ...++..++.   ..+++........ ...+.+..|++|.|+|
T Consensus         1 i~Hi~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~---~~~~~~~~~~---~~i~l~~~~~~~~~~~~~~~~~~~~~~v~d   74 (114)
T cd07245           1 LDHVALRVPDLEASRAFYTDVLGLEEGPRPPFLF---PGAWLYAGDG---PQLHLIEEDPPDALPEGPGRDDHIAFRVDD   74 (114)
T ss_pred             CCeEEEecCCHHHHHHHHHHccCCcccCcCCCCC---CceEEEeCCC---cEEEEEecCCCccccCCCcccceEEEEeCC
Confidence            5799999999999999999999999765433221   1122332221   2444443322211 1234567899999999


Q ss_pred             hHHhHHHHHHHHHHhCCeeecCCccCCCCCceEEEEECCCCceEEE
Q 022818          233 VYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVL  278 (291)
Q Consensus       233 i~~~~~~l~~~~~~~G~~~~~~~~~~~~~~~~~~~~~DpdG~~iel  278 (291)
                      ++++++++    +++|+++..++.. . .+.+.+|++||+||+|||
T Consensus        75 ~~~~~~~l----~~~g~~~~~~~~~-~-~~~~~~~~~DP~G~~iE~  114 (114)
T cd07245          75 LDAFRARL----KAAGVPYTESDVP-G-DGVRQLFVRDPDGNRIEL  114 (114)
T ss_pred             HHHHHHHH----HHcCCCcccccCC-C-CCccEEEEECCCCCEEeC
Confidence            99999999    9999998877754 2 235789999999999996

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases.

>cd08351 ChaP_like ChaP, an enzyme involved in the biosynthesis of the antitumor agent chartreusin (cha); and similar proteins

Probab=99.65  E-value=3.8e-15  Score=109.75  Aligned_cols=111  Identities=16%  Similarity=0.224  Sum_probs=80.3

Q ss_pred             CCceEEEeeeCChhhhHHHHHHhcCCeeeeeeccCCccceEEEeccccCCceeEEEEeeecCcceeecCcceeEEEEEec
Q 022818          152 EPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTD  231 (291)
Q Consensus       152 ~~~~~v~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~hi~~~v~  231 (291)
                      .++.|+.|.|+|++++++||+++|||++....    +.+..+.++  .   +..+.+...      ....+..|++|.++
T Consensus         3 ~~~~hv~l~v~Dl~~s~~FY~~~lG~~~~~~~----~~~~~~~~~--~---~~~l~~~~~------~~~~~~~h~a~~v~   67 (123)
T cd08351           3 VTLNHTIVPARDREASAEFYAEILGLPWAKPF----GPFAVVKLD--N---GVSLDFAQP------DGEIPPQHYAFLVS   67 (123)
T ss_pred             ceEeEEEEEcCCHHHHHHHHHHhcCCEeeecc----CCEEEEEcC--C---CcEEEEecC------CCCCCcceEEEEeC
Confidence            46889999999999999999999999976522    112222222  1   234544331      11234579999886


Q ss_pred             --chHHhHHHHHHHHHHhCCeeecCCccC------CCCCceEEEEECCCCceEEEeec
Q 022818          232 --DVYKSAEVVNLVTQELGGKITRQPGSI------PGLNTKITSFVDPDGWKTVLVDN  281 (291)
Q Consensus       232 --di~~~~~~l~~~~~~~G~~~~~~~~~~------~~~~~~~~~~~DpdG~~iel~~~  281 (291)
                        |+++++++|    +++|+++...|...      ..++++.+||+|||||.|||+++
T Consensus        68 ~~dl~~~~~~l----~~~G~~~~~~~~~~~~~~~~~~~g~~~~~f~DPdG~~iEl~~~  121 (123)
T cd08351          68 EEEFDRIFARI----RERGIDYWADPQRTEPGQINTNDGGRGVYFLDPDGHLLEIITR  121 (123)
T ss_pred             HHHHHHHHHHH----HHcCCceecCCcccccccccCCCCeeEEEEECCCCCEEEEEec
Confidence              588888888    99999987776553      12356999999999999999986

ChaP is an enzyme involved in the biosynthesis of the potent antitumor agent chartreusin (cha). Cha is an aromatic polyketide glycoside produced by Streptomyces chartreusis. ChaP may play a role as a meta-cleavage dioxygenase in the oxidative rearrangement of the anthracyclic polyketide. ChaP belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases.

>cd08362 BphC5-RrK37_N_like N-terminal, non-catalytic, domain of BphC5 (2,3-dihydroxybiphenyl 1,2-dioxygenase) from Rhodococcus rhodochrous K37, and similar proteins

Probab=99.65  E-value=9.4e-15  Score=107.04  Aligned_cols=113  Identities=25%  Similarity=0.362  Sum_probs=81.9

Q ss_pred             ceeeEEEEEEeCCHHHHHHHHHhhcCCEEEEEeecCCCceeEEEEecCCCCcceEEEeeecCCCCcccCCCCceEEEEEe
Q 022818           21 KRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIAT  100 (291)
Q Consensus        21 ~~~i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~~~~i~~~v  100 (291)
                      +.+|+|+.|.|+|++++.+||+++|||+......  +    ..++..++. ....+.+...       ..++..|++|.|
T Consensus         1 ~~~i~hv~l~v~d~~~s~~FY~~~lG~~~~~~~~--~----~~~~~~~~~-~~~~~~~~~~-------~~~~~~~~~~~v   66 (120)
T cd08362           1 VTALRGVGLGVPDLAAAAAFYREVWGLSVVAEDD--G----IVYLRATGS-EHHILRLRRS-------DRNRLDVVSFSV   66 (120)
T ss_pred             CceeeEEEEecCCHHHHHHHHHhCcCcEEEEecC--C----EEEEECCCC-ccEEEEeccC-------CCCCCceEEEEe
Confidence            4689999999999999999999999999865432  1    234443322 2233333221       123567999999


Q ss_pred             ---CCHHHHHHHHHHcCCeeecCCee--cCCCceEEEEEECCCCCEEEEEeCC
Q 022818          101 ---EDVYKLVENIRAKGGNVTREPGP--LKGGTTHIAFVKDPDGYIFELIQRG  148 (291)
Q Consensus       101 ---~d~~~~~~~l~~~G~~~~~~~~~--~~~g~~~~~~~~Dp~G~~iel~~~~  148 (291)
                         +++++++++|+++|+++..+|..  .+++.. .++|+||+||.|+++...
T Consensus        67 ~~~~~l~~~~~~l~~~G~~~~~~~~~~~~~~~~~-~~~~~DP~G~~iel~~~~  118 (120)
T cd08362          67 ASRADVDALARQVAARGGTVLSEPGATDDPGGGY-GFRFFDPDGRLIEFSADV  118 (120)
T ss_pred             CCHHHHHHHHHHHHHcCCceecCCcccCCCCCce-EEEEECCCCCEEEEEecc
Confidence               57899999999999998776533  344444 489999999999998764

2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC) catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). The enzyme contains a N-terminal and a C-terminal domain of similar structure fold, resulting from an ancient gene duplication. BphC belongs to the type I extradiol dioxygenase family, which requires a metal in the active site for its catalytic activity. Polychlorinated biphenyl degrading bacteria demonstrate multiplicity of BphCs. Bacterium Rhodococcus rhodochrous K37 has eight genes encoding BphC enzymes. This family includes the N-terminal domain of BphC5-RrK37. The crystal structure of the protein from Novosphingobium aromaticivorans has a Mn(II)in the active site, although most proteins of type I extradiol dioxyge

>PF12681 Glyoxalase_2: Glyoxalase-like domain; PDB: 3G12_B 1JIF_B 1JIE_B 1QTO_A 3OXH_A 2PJS_A 2RBB_A 3SK1_B 3SK2_B 3RRI_A

Probab=99.64  E-value=5.9e-15  Score=106.00  Aligned_cols=108  Identities=23%  Similarity=0.312  Sum_probs=75.9

Q ss_pred             EEeCCHHHHHHHHHhhcCCEEEEEeecCCCceeEEEEecCCCCcceEEEeeecCCCCcccCCCCceEEEEEeCCHHHHHH
Q 022818           29 YRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIATEDVYKLVE  108 (291)
Q Consensus        29 l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~~~~i~~~v~d~~~~~~  108 (291)
                      |.|+|++++++||+++|||++....+  .    ...+..+.....-...+....  .......+..|++|.|+|++++++
T Consensus         1 l~v~d~~~a~~FY~~~lg~~~~~~~~--~----~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~v~dv~~~~~   72 (108)
T PF12681_consen    1 LPVSDLEAAAAFYEDVLGFEVVFDDP--D----YVDFSLGFRFHDGVIEFLQFP--DPPGPPGGGFHLCFEVEDVDALYE   72 (108)
T ss_dssp             EEESSHHHHHHHHHHTTTSEEEEEET--S----EEEEEETEEEEEEEEEEEEEE--SSSSSSSSEEEEEEEESHHHHHHH
T ss_pred             CccCCHHHHHHHHHHhcCCEEEEeCC--C----eEEEEeccchhhhhHHHccCC--ccccCCCceeEEEEEEcCHHHHHH
Confidence            68999999999999999999988433  1    222322211000011222211  112234578899999999999999


Q ss_pred             HHHHcCCeeecCCeecCCCceEEEEEECCCCCEEEEE
Q 022818          109 NIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELI  145 (291)
Q Consensus       109 ~l~~~G~~~~~~~~~~~~g~~~~~~~~Dp~G~~iel~  145 (291)
                      +++++|+++..+|...++|.. .+++.||+||+|+|+
T Consensus        73 ~l~~~G~~~~~~~~~~~~g~~-~~~~~DPdG~~ie~~  108 (108)
T PF12681_consen   73 RLKELGAEIVTEPRDDPWGQR-SFYFIDPDGNRIEFC  108 (108)
T ss_dssp             HHHHTTSEEEEEEEEETTSEE-EEEEE-TTS-EEEEE
T ss_pred             HHHHCCCeEeeCCEEcCCCeE-EEEEECCCCCEEEeC
Confidence            999999999888888888755 499999999999986

...

>cd08364 FosX FosX, a fosfomycin resistance protein, catalyzes the addition of a water molecule to the C1 position of the antibiotic with inversion of configuration at C1

Probab=99.64  E-value=6.9e-15  Score=109.53  Aligned_cols=117  Identities=16%  Similarity=0.185  Sum_probs=78.4

Q ss_pred             CCceEEEeeeCChhhhHHHHHHhcCCeeeeeeccCCc--cceEEEeccccCCceeEEEEeeecCcceeecCcceeEEEEE
Q 022818          152 EPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEY--KYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAIS  229 (291)
Q Consensus       152 ~~~~~v~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~hi~~~  229 (291)
                      .++.|++|.|+|++++.+||+++||+++..+......  ....++.. +    ...+++.....    ...++..|++|.
T Consensus         3 ~~i~hv~l~V~dl~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~-~----~~~i~l~~~~~----~~~~~~~Hiaf~   73 (131)
T cd08364           3 EGLSHITLIVKDLNKTTAFLQNIFNAREVYSSGDKTFSLSKEKFFLI-G----GLWIAIMEGDS----LQERTYNHIAFK   73 (131)
T ss_pred             ccEeEEEEEeCCHHHHHHHHHHHhCCeeEEecccccccccceeEEEc-C----CeEEEEecCCC----CCCCCceEEEEE
Confidence            3689999999999999999999999987654322110  00111111 1    23455542111    122367899999


Q ss_pred             ec--chHHhHHHHHHHHHHhCCeeecCCccCCCCCceEEEEECCCCceEEEeech
Q 022818          230 TD--DVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNE  282 (291)
Q Consensus       230 v~--di~~~~~~l~~~~~~~G~~~~~~~~~~~~~~~~~~~~~DpdG~~iel~~~~  282 (291)
                      |+  +++++.++|    +++|+++..+. ....+.++.+||+|||||.|||....
T Consensus        74 v~~~~ld~~~~~l----~~~gv~~~~~~-~~~~~~g~~~yf~DPdG~~iEl~~~~  123 (131)
T cd08364          74 ISDSDVDEYTERI----KALGVEMKPPR-PRVQGEGRSIYFYDFDNHLFELHTGT  123 (131)
T ss_pred             cCHHHHHHHHHHH----HHCCCEEecCC-ccccCCceEEEEECCCCCEEEEecCC
Confidence            98  566777777    99999876433 22332358999999999999998654

This subfamily family contains FosX, a fosfomycin resistant protein. Fosfomycin inhibits the enzyme UDP-Nacetylglucosamine-3-enolpyruvyltransferase (MurA), which catalyzes the first committed step in bacterial cell wall biosynthesis. FosX catalyzes the addition of a water molecule to the C1 position of the antibiotic with inversion of the configuration at C1 in the presence of Mn(II). The hydrated fosfomycin loses the inhibition activity. FosX is evolutionarily related to glyoxalase I and type I extradiol dioxygenases.

>cd07242 Glo_EDI_BRP_like_6 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.64  E-value=1.9e-14  Score=106.67  Aligned_cols=116  Identities=22%  Similarity=0.335  Sum_probs=81.8

Q ss_pred             eeEEEEEEeCCHHHHHHHHHhhc---CCEEEEEeecCCCceeEEEEecCCCCcceEEEeeecCCCCc---ccCCCCceEE
Q 022818           23 RFLHAVYRVGDLDRTIKFYTECF---GMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTS---YDIGTGFGHF   96 (291)
Q Consensus        23 ~i~hv~l~v~d~~~~~~FY~~~l---G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~---~~~g~~~~~i   96 (291)
                      +|+||.|.|+|++++.+||+++|   ||++..+..  .+   ..+... ..  ...+.+.......+   ...+.+..|+
T Consensus         1 ~i~Hv~i~v~d~~~~~~Fy~~~l~~~G~~~~~~~~--~~---~~~~~~-~~--~~~i~l~~~~~~~~~~~~~~~~g~~hi   72 (128)
T cd07242           1 GIHHVELTVRDLERSRAFYDWLLGLLGFEEVKEWE--DG---RSWRAG-DG--GTYLVLQQADGESAGRHDRRNPGLHHL   72 (128)
T ss_pred             CCceEEEEeCCHHHHHHHHHHHHhhcCCEEEEeec--cC---ceEEec-CC--ceEEEEEecccCCCcccccCCcCeeEE
Confidence            57999999999999999999999   999876542  11   122221 11  23344443322211   1234578899


Q ss_pred             EEEeC---CHHHHHHHHHHcCCeeecCCeec--CCCceEEEEEECCCCCEEEEEe
Q 022818           97 AIATE---DVYKLVENIRAKGGNVTREPGPL--KGGTTHIAFVKDPDGYIFELIQ  146 (291)
Q Consensus        97 ~~~v~---d~~~~~~~l~~~G~~~~~~~~~~--~~g~~~~~~~~Dp~G~~iel~~  146 (291)
                      +|.|+   |+++++++|+++|+++...+...  ..+..+.+|++||+||+|||+.
T Consensus        73 a~~v~~~~d~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~DpdG~~ie~~~  127 (128)
T cd07242          73 AFRAPSREAVDELYARLAKRGAEILYAPREPYAGGPGYYALFFEDPDGIRLELVA  127 (128)
T ss_pred             EEEcCCHHHHHHHHHHHHHcCCeEecCCcccccCCCcEEEEEEECCCCcEEEEEe
Confidence            99996   48999999999999988876642  2233345899999999999985

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>PRK06724 hypothetical protein; Provisional

Probab=99.64  E-value=5.3e-15  Score=109.32  Aligned_cols=110  Identities=18%  Similarity=0.211  Sum_probs=74.3

Q ss_pred             CCceEEEeeeCChhhhHHHHHHhc---CCeeeeeeccCCccceEEEeccccCCceeEEEEeeecCcceeecCcceeEEEE
Q 022818          152 EPLCQVMLRVGDLGRSIKFYEKAL---GMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAI  228 (291)
Q Consensus       152 ~~~~~v~l~v~d~~~~~~fy~~~l---G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~hi~~  228 (291)
                      .+++||.|.|+|+++|++||+++|   |+++........+              ...+.+......  .....+..|+||
T Consensus         6 ~~i~Hv~l~V~Dle~s~~FY~~vlg~lg~~~~~~~~~~~g--------------~~~l~l~~~~~~--~~~~~g~~h~af   69 (128)
T PRK06724          6 AGIHHIEFWVANLEESISFYDMLFSIIGWRKLNEVAYSTG--------------ESEIYFKEVDEE--IVRTLGPRHICY   69 (128)
T ss_pred             cccCEEEEEeCCHHHHHHHHHHHHhhCCcEEeeeEeeeCC--------------CeeEEEecCCcc--ccCCCCceeEEE
Confidence            469999999999999999999966   6664322111111              111212110000  012346789999


Q ss_pred             Ee---cchHHhHHHHHHHHHHhCCeeecCCccCC--CCCceEEEEECCCCceEEEeec
Q 022818          229 ST---DDVYKSAEVVNLVTQELGGKITRQPGSIP--GLNTKITSFVDPDGWKTVLVDN  281 (291)
Q Consensus       229 ~v---~di~~~~~~l~~~~~~~G~~~~~~~~~~~--~~~~~~~~~~DpdG~~iel~~~  281 (291)
                      .|   ++++++.++|    +++|+++..+|...+  .++.+.+||+|||||.|||+..
T Consensus        70 ~v~~~~dvd~~~~~l----~~~G~~~~~~p~~~~~~~~g~~~~~f~DPdG~~iEl~~~  123 (128)
T PRK06724         70 QAINRKVVDEVAEFL----SSTKIKIIRGPMEMNHYSEGYYTIDFYDPNGFIIEVAYT  123 (128)
T ss_pred             ecCChHHHHHHHHHH----HHCCCEEecCCcccCCCCCCEEEEEEECCCCCEEEEEeC
Confidence            98   5677777777    999999987876544  2334788999999999999865

>cd08348 BphC2-C3-RGP6_C_like The single-domain 2,3-dihydroxybiphenyl 1,2-dioxygenases (BphC, EC 1

Probab=99.63  E-value=9.9e-15  Score=109.15  Aligned_cols=120  Identities=21%  Similarity=0.234  Sum_probs=81.4

Q ss_pred             CceEEEeeeCChhhhHHHHHHhcCCeeeeeeccCCccceEEEeccccCCceeEEEEeeecCcceeecCcceeEEEEEecc
Q 022818          153 PLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDD  232 (291)
Q Consensus       153 ~~~~v~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~hi~~~v~d  232 (291)
                      ++.|+.|.|+|++++++||+++|||++......  .  ...++..+. .....+.+.............++.|++|.|+|
T Consensus         1 ~i~hv~l~v~D~~~s~~FY~~~lG~~~~~~~~~--~--~~~~~~~~~-~~~~~l~l~~~~~~~~~~~~~~~~h~~f~v~~   75 (134)
T cd08348           1 RLSHVVLYVRDLEAMVRFYRDVLGFTVTDRGPL--G--GLVFLSRDP-DEHHQIALITGRPAAPPPGPAGLNHIAFEVDS   75 (134)
T ss_pred             CeeEEEEEecCHHHHHHHHHHhcCCEEEeeccC--C--cEEEEEecC-CCceEEEEEecCCCCCCCCCCCceEEEEEeCC
Confidence            478999999999999999999999997654321  1  233443221 11344555433222111233477899999998


Q ss_pred             hHH---hHHHHHHHHHHhCCeeecCCccCCCCCceEEEEECCCCceEEEeechhh
Q 022818          233 VYK---SAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNEDF  284 (291)
Q Consensus       233 i~~---~~~~l~~~~~~~G~~~~~~~~~~~~~~~~~~~~~DpdG~~iel~~~~~~  284 (291)
                      +++   ++++|    +++|+++...+.. +  +++.+|++||+||+|||....+.
T Consensus        76 ~~~v~~~~~~l----~~~G~~~~~~~~~-~--~~~~~~~~DP~G~~ie~~~~~~~  123 (134)
T cd08348          76 LDDLRDLYERL----RAAGITPVWPVDH-G--NAWSIYFRDPDGNRLELFVDTPW  123 (134)
T ss_pred             HHHHHHHHHHH----HHCCCCccccCCC-C--ceeEEEEECCCCCEEEEEEcCCC
Confidence            553   55566    9999988765432 2  24789999999999999977654

13.11.39) from Rhodococcus globerulus P6, BphC2-RGP6 and BphC3-RGP6, and similar proteins. This subfamily contains Rhodococcus globerulus P6 BphC2-RGP6 and BphC3-RGP6, and similar proteins. BphC catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, yielding 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoic acid. This is the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). This subfamily of BphCs belongs to the type I extradiol dioxygenase family, which require a metal in the active site in its catalytic mechanism. Most type I extradiol dioxygenases are activated by Fe(II). Polychlorinated biphenyl degrading bacteria demonstrate a multiplicity of BphCs. For example, three types of BphC enzymes have been found in Rhodococcus globerulus (BphC1-RGP6 - BphC3-RGP6), all three enzymes are type I extradiol dioxygenases. BphC2-RGP6 and BphC3-RGP6 are

>cd07238 Glo_EDI_BRP_like_5 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.63  E-value=9.8e-15  Score=105.65  Aligned_cols=108  Identities=20%  Similarity=0.226  Sum_probs=78.7

Q ss_pred             EEeeeCChhhhHHHHHHhcCCeeeeeeccCCccceEEEeccccCCceeEEEEeeecCcceeecCcceeEEEEEecchHHh
Q 022818          157 VMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDVYKS  236 (291)
Q Consensus       157 v~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~hi~~~v~di~~~  236 (291)
                      ..|.|+|++++++||+++|||+.....    +  ....+..+. ..+..+.+.....     .++...|++|.|+|++++
T Consensus         4 ~~l~v~Dl~~s~~FY~~~lG~~~~~~~----~--~~~~~~~~~-~~~~~~~~~~~~~-----~~~~~~~i~~~v~d~~~~   71 (112)
T cd07238           4 PNLPVADPEAAAAFYADVLGLDVVMDH----G--WIATFASPQ-NMTVQVSLATEGG-----TATVVPDLSIEVDDVDAA   71 (112)
T ss_pred             ceEecCCHHHHHHHHHHhcCceEEEcC----C--ceEEEeecC-CCCcEEEEecCCC-----CCCCCCEEEEEeCCHHHH
Confidence            478999999999999999999975321    1  222233212 1233444432111     123457999999999999


Q ss_pred             HHHHHHHHHHhCCeeecCCccCCCCCceEEEEECCCCceEEEeec
Q 022818          237 AEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDN  281 (291)
Q Consensus       237 ~~~l~~~~~~~G~~~~~~~~~~~~~~~~~~~~~DpdG~~iel~~~  281 (291)
                      +++|    +++|+++..+|...++ +.+.+|+.||+||+|||+++
T Consensus        72 ~~~l----~~~G~~~~~~~~~~~~-g~~~~~~~DP~Gn~i~~~~~  111 (112)
T cd07238          72 LARA----VAAGFAIVYGPTDEPW-GVRRFFVRDPFGKLVNILTH  111 (112)
T ss_pred             HHHH----HhcCCeEecCCccCCC-ceEEEEEECCCCCEEEEEEc
Confidence            9999    9999999888877665 45789999999999999975

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The structure of this family is a that of a strand-swapped dimer.

>cd07240 ED_TypeI_classII_N N-terminal domain of type I, class II extradiol dioxygenases; non-catalytic domain

Probab=99.63  E-value=1.2e-14  Score=105.89  Aligned_cols=111  Identities=23%  Similarity=0.309  Sum_probs=81.0

Q ss_pred             CCceEEEeeeCChhhhHHHHHHhcCCeeeeeeccCCccceEEEeccccCCceeEEEEeeecCcceeecCcceeEEEEEec
Q 022818          152 EPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTD  231 (291)
Q Consensus       152 ~~~~~v~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~hi~~~v~  231 (291)
                      +++.|+.|.|+|++++.+||+++|||++....+      ...++..+.+ ....+.+...       ...+..|++|.|+
T Consensus         1 ~~l~hv~l~v~d~~~~~~FY~~~lg~~~~~~~~------~~~~~~~~~~-~~~~~~~~~~-------~~~~~~h~~~~v~   66 (117)
T cd07240           1 RRIAYAELEVPDLERALEFYTDVLGLTVLDRDA------GSVYLRCSED-DHHSLVLTEG-------DEPGVDALGFEVA   66 (117)
T ss_pred             CceeEEEEecCCHHHHHHHHHhccCcEEEeecC------CeEEEecCCC-CcEEEEEEeC-------CCCCceeEEEEcC
Confidence            368999999999999999999999999876532      1223332211 2334444321       1246789999998


Q ss_pred             ---chHHhHHHHHHHHHHhCCeeecCCccCCCCCceEEEEECCCCceEEEeec
Q 022818          232 ---DVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDN  281 (291)
Q Consensus       232 ---di~~~~~~l~~~~~~~G~~~~~~~~~~~~~~~~~~~~~DpdG~~iel~~~  281 (291)
                         ++++..+++    +++|+++...|...++ +++.+|++||+||+||++..
T Consensus        67 ~~~~v~~~~~~l----~~~g~~~~~~~~~~~~-~~~~~~~~DP~G~~ie~~~~  114 (117)
T cd07240          67 SEEDLEALAAHL----EAAGVAPEEASDPEPG-VGRGLRFQDPDGHLLELFVE  114 (117)
T ss_pred             CHHHHHHHHHHH----HHcCCceEEcCccCCC-CceEEEEECCCCCEEEEEEc
Confidence               466677777    9999999887765554 35889999999999999865

This family contains the N-terminal, non-catalytic, domain of type I, class II extradiol dioxygenases. Dioxygenases catalyze the incorporation of both atoms of molecular oxygen into substrates using a variety of reaction mechanisms, resulting in the cleavage of aromatic rings. Two major groups of dioxygenases have been identified according to the cleavage site; extradiol enzymes cleave the aromatic ring between a hydroxylated carbon and an adjacent non-hydroxylated carbon, whereas intradiol enzymes cleave the aromatic ring between two hydroxyl groups. Extradiol dioxygenases are classified into type I and type II enzymes. Type I extradiol dioxygenases include class I and class II enzymes. These two classes of enzymes show sequence similarity; the two-domain class II enzymes evolved from a class I enzyme through gene duplication. The extradiol dioxygenases represented in this fa

>cd07238 Glo_EDI_BRP_like_5 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.62  E-value=2.6e-14  Score=103.44  Aligned_cols=109  Identities=20%  Similarity=0.269  Sum_probs=78.9

Q ss_pred             EEEEEeCCHHHHHHHHHhhcCCEEEEEeecCCCceeEEEEecCCCCcceEEEeeecCCCCcccCCCCceEEEEEeCCHHH
Q 022818           26 HAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIATEDVYK  105 (291)
Q Consensus        26 hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~~~~i~~~v~d~~~  105 (291)
                      +..|.|+|++++.+||+++|||+....    .+  ...++..++ ...+.+.+.....     .+....|++|.|+|+++
T Consensus         3 ~~~l~v~Dl~~s~~FY~~~lG~~~~~~----~~--~~~~~~~~~-~~~~~~~~~~~~~-----~~~~~~~i~~~v~d~~~   70 (112)
T cd07238           3 VPNLPVADPEAAAAFYADVLGLDVVMD----HG--WIATFASPQ-NMTVQVSLATEGG-----TATVVPDLSIEVDDVDA   70 (112)
T ss_pred             cceEecCCHHHHHHHHHHhcCceEEEc----CC--ceEEEeecC-CCCcEEEEecCCC-----CCCCCCEEEEEeCCHHH
Confidence            356889999999999999999998643    11  123333222 1223343332211     12245699999999999


Q ss_pred             HHHHHHHcCCeeecCCeecCCCceEEEEEECCCCCEEEEEeC
Q 022818          106 LVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQR  147 (291)
Q Consensus       106 ~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~Dp~G~~iel~~~  147 (291)
                      ++++|++.|+++..+|...++|.+. +++.||+||+|+++++
T Consensus        71 ~~~~l~~~G~~~~~~~~~~~~g~~~-~~~~DP~Gn~i~~~~~  111 (112)
T cd07238          71 ALARAVAAGFAIVYGPTDEPWGVRR-FFVRDPFGKLVNILTH  111 (112)
T ss_pred             HHHHHHhcCCeEecCCccCCCceEE-EEEECCCCCEEEEEEc
Confidence            9999999999988888777776554 8999999999999875

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The structure of this family is a that of a strand-swapped dimer.

>cd08348 BphC2-C3-RGP6_C_like The single-domain 2,3-dihydroxybiphenyl 1,2-dioxygenases (BphC, EC 1

Probab=99.62  E-value=4.7e-14  Score=105.47  Aligned_cols=120  Identities=25%  Similarity=0.418  Sum_probs=82.0

Q ss_pred             eeEEEEEEeCCHHHHHHHHHhhcCCEEEEEeecCCCceeEEEEecCCCCcceEEEeeecCCCCcccCCCCceEEEEEeCC
Q 022818           23 RFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIATED  102 (291)
Q Consensus        23 ~i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~~~~i~~~v~d  102 (291)
                      +|+|+.|.|+|++++++||+++||++.......  .  ...++..+. .....+.+.............+..|++|.|+|
T Consensus         1 ~i~hv~l~v~D~~~s~~FY~~~lG~~~~~~~~~--~--~~~~~~~~~-~~~~~l~l~~~~~~~~~~~~~~~~h~~f~v~~   75 (134)
T cd08348           1 RLSHVVLYVRDLEAMVRFYRDVLGFTVTDRGPL--G--GLVFLSRDP-DEHHQIALITGRPAAPPPGPAGLNHIAFEVDS   75 (134)
T ss_pred             CeeEEEEEecCHHHHHHHHHHhcCCEEEeeccC--C--cEEEEEecC-CCceEEEEEecCCCCCCCCCCCceEEEEEeCC
Confidence            589999999999999999999999998765431  1  234444331 11223333333222111233478899999987


Q ss_pred             HH---HHHHHHHHcCCeeecCCeecCCCceEEEEEECCCCCEEEEEeCCCC
Q 022818          103 VY---KLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRGPT  150 (291)
Q Consensus       103 ~~---~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~Dp~G~~iel~~~~~~  150 (291)
                      .+   +++++|.+.|+++...+. . ++. ..++++||+||+|||+...+.
T Consensus        76 ~~~v~~~~~~l~~~G~~~~~~~~-~-~~~-~~~~~~DP~G~~ie~~~~~~~  123 (134)
T cd08348          76 LDDLRDLYERLRAAGITPVWPVD-H-GNA-WSIYFRDPDGNRLELFVDTPW  123 (134)
T ss_pred             HHHHHHHHHHHHHCCCCccccCC-C-Cce-eEEEEECCCCCEEEEEEcCCC
Confidence            55   588999999998776532 1 222 348999999999999987654

13.11.39) from Rhodococcus globerulus P6, BphC2-RGP6 and BphC3-RGP6, and similar proteins. This subfamily contains Rhodococcus globerulus P6 BphC2-RGP6 and BphC3-RGP6, and similar proteins. BphC catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, yielding 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoic acid. This is the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). This subfamily of BphCs belongs to the type I extradiol dioxygenase family, which require a metal in the active site in its catalytic mechanism. Most type I extradiol dioxygenases are activated by Fe(II). Polychlorinated biphenyl degrading bacteria demonstrate a multiplicity of BphCs. For example, three types of BphC enzymes have been found in Rhodococcus globerulus (BphC1-RGP6 - BphC3-RGP6), all three enzymes are type I extradiol dioxygenases. BphC2-RGP6 and BphC3-RGP6 are

>cd08362 BphC5-RrK37_N_like N-terminal, non-catalytic, domain of BphC5 (2,3-dihydroxybiphenyl 1,2-dioxygenase) from Rhodococcus rhodochrous K37, and similar proteins

Probab=99.62  E-value=1.1e-14  Score=106.59  Aligned_cols=112  Identities=28%  Similarity=0.378  Sum_probs=79.1

Q ss_pred             CCceEEEeeeCChhhhHHHHHHhcCCeeeeeeccCCccceEEEeccccCCceeEEEEeeecCcceeecCcceeEEEEEec
Q 022818          152 EPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTD  231 (291)
Q Consensus       152 ~~~~~v~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~hi~~~v~  231 (291)
                      .++.|+.|.|+|++++++||+++|||+......    ++.  ++..+.. ....+.+..       ...++..|++|.++
T Consensus         2 ~~i~hv~l~v~d~~~s~~FY~~~lG~~~~~~~~----~~~--~~~~~~~-~~~~~~~~~-------~~~~~~~~~~~~v~   67 (120)
T cd08362           2 TALRGVGLGVPDLAAAAAFYREVWGLSVVAEDD----GIV--YLRATGS-EHHILRLRR-------SDRNRLDVVSFSVA   67 (120)
T ss_pred             ceeeEEEEecCCHHHHHHHHHhCcCcEEEEecC----CEE--EEECCCC-ccEEEEecc-------CCCCCCceEEEEeC
Confidence            368999999999999999999999999764422    233  2332221 223333321       11235689999995


Q ss_pred             ---chHHhHHHHHHHHHHhCCeeecCCcc--CCCCCceEEEEECCCCceEEEeech
Q 022818          232 ---DVYKSAEVVNLVTQELGGKITRQPGS--IPGLNTKITSFVDPDGWKTVLVDNE  282 (291)
Q Consensus       232 ---di~~~~~~l~~~~~~~G~~~~~~~~~--~~~~~~~~~~~~DpdG~~iel~~~~  282 (291)
                         +++++++++    +++|+++..+|..  .++ +++.++|+||+||.|||+...
T Consensus        68 ~~~~l~~~~~~l----~~~G~~~~~~~~~~~~~~-~~~~~~~~DP~G~~iel~~~~  118 (120)
T cd08362          68 SRADVDALARQV----AARGGTVLSEPGATDDPG-GGYGFRFFDPDGRLIEFSADV  118 (120)
T ss_pred             CHHHHHHHHHHH----HHcCCceecCCcccCCCC-CceEEEEECCCCCEEEEEecc
Confidence               577777777    9999998877643  233 467899999999999998754

2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC) catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). The enzyme contains a N-terminal and a C-terminal domain of similar structure fold, resulting from an ancient gene duplication. BphC belongs to the type I extradiol dioxygenase family, which requires a metal in the active site for its catalytic activity. Polychlorinated biphenyl degrading bacteria demonstrate multiplicity of BphCs. Bacterium Rhodococcus rhodochrous K37 has eight genes encoding BphC enzymes. This family includes the N-terminal domain of BphC5-RrK37. The crystal structure of the protein from Novosphingobium aromaticivorans has a Mn(II)in the active site, although most proteins of type I extradiol dioxyge

>cd08349 BLMA_like Bleomycin binding protein (BLMA) and similar proteins; BLMA confers bleomycin (Bm) resistance by directly binding to Bm

Probab=99.62  E-value=1.5e-14  Score=104.46  Aligned_cols=109  Identities=25%  Similarity=0.273  Sum_probs=79.2

Q ss_pred             EeeeCChhhhHHHHHHhcCCeeeeeeccCCccceEEEeccccCCceeEEEEeeecCcceeecCcceeEEEEEecchHHhH
Q 022818          158 MLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDVYKSA  237 (291)
Q Consensus       158 ~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~hi~~~v~di~~~~  237 (291)
                      .|.|+|++++++||+++|||++.....  +.  .+.++..+    ...+.+........ ...++..|++|.++|++++.
T Consensus         3 ~i~v~d~~~s~~FY~~~lg~~~~~~~~--~~--~~~~~~~~----~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~   73 (112)
T cd08349           3 VLPVSDIERSLAFYRDVLGFEVDWEHP--EP--GYAFLSRG----GAQLMLSEHDGDEP-VPLGRGGSVYIEVEDVDALY   73 (112)
T ss_pred             EEEECCHHHHHHHHHhccCeEEEEEcC--CC--cEEEEEeC----CEEEEEeccCCCCC-CCCCCcEEEEEEeCCHHHHH
Confidence            589999999999999999999876543  12  23334321    34455543332211 12346679999999999999


Q ss_pred             HHHHHHHHHhCCe-eecCCccCCCCCceEEEEECCCCceEEEee
Q 022818          238 EVVNLVTQELGGK-ITRQPGSIPGLNTKITSFVDPDGWKTVLVD  280 (291)
Q Consensus       238 ~~l~~~~~~~G~~-~~~~~~~~~~~~~~~~~~~DpdG~~iel~~  280 (291)
                      +++    +++|++ +..++...++ +.+.++++||+|+.|||+|
T Consensus        74 ~~l----~~~G~~~~~~~~~~~~~-g~~~~~~~DP~G~~ie~~~  112 (112)
T cd08349          74 AEL----KAKGADLIVYPPEDQPW-GMREFAVRDPDGNLLRFGE  112 (112)
T ss_pred             HHH----HHcCCcceecCccCCCc-ccEEEEEECCCCCEEEecC
Confidence            999    999999 6666665555 4588999999999999986

BLMA also called Bleomycin resistance protein, confers Bm resistance by directly binding to Bm. Bm is a glycopeptide antibiotic produced naturally by actinomycetes. It is a potent anti-cancer drug, which acts as a strong DNA-cutting agent, thereby causing cell death. BLMA is produced by actinomycetes to protect themselves against their own lethal compound. BLMA has two identically-folded subdomains, with the same alpha/beta fold; these two halves have no sequence similarity. BLMAs are dimers and each dimer binds to two Bm molecules at the Bm-binding pockets formed at the dimer interface; two Bm molecules are bound per dimer. BLMA belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. As for the large

>cd08345 Fosfomycin_RP Fosfomycin resistant protein; inhibits the biological function of fosfomycin

Probab=99.62  E-value=1.6e-14  Score=104.68  Aligned_cols=109  Identities=23%  Similarity=0.411  Sum_probs=75.9

Q ss_pred             EEEEEeCCHHHHHHHHHhhcCCEEEEEeecCCCceeEEEEecCCCCcceEEEeeecCCCCcccCCCCceEEEEEe--CCH
Q 022818           26 HAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIAT--EDV  103 (291)
Q Consensus        26 hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~~~~i~~~v--~d~  103 (291)
                      |+.|.|+|++++.+||+++||++...+.+  .    ..++..++    ..+.+.......  ..+.+..|++|.|  +|+
T Consensus         1 Hv~l~v~d~~~s~~Fy~~~lg~~~~~~~~--~----~~~~~~~~----~~l~~~~~~~~~--~~~~~~~hiaf~v~~~d~   68 (113)
T cd08345           1 HITLIVKDLNKSIAFYRDILGAELIYSSS--K----EAYFELAG----LWICLMEEDSLQ--GPERTYTHIAFQIQSEEF   68 (113)
T ss_pred             CeeEEECCHHHHHHHHHHhcCCeeeeccC--c----eeEEEecC----eEEEeccCCCcC--CCCCCccEEEEEcCHHHH
Confidence            89999999999999999999999875532  1    23343332    123232221111  1234678999999  579


Q ss_pred             HHHHHHHHHcCCeeecCCeecCCCceEEEEEECCCCCEEEEEeC
Q 022818          104 YKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQR  147 (291)
Q Consensus       104 ~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~Dp~G~~iel~~~  147 (291)
                      +++++++.++|+++...+....++.. .++++||+||+||++..
T Consensus        69 ~~~~~~l~~~G~~~~~~~~~~~~~~~-~~~~~DPdG~~iEi~~~  111 (113)
T cd08345          69 DEYTERLKALGVEMKPERPRVQGEGR-SIYFYDPDGHLLELHAG  111 (113)
T ss_pred             HHHHHHHHHcCCccCCCccccCCCce-EEEEECCCCCEEEEEeC
Confidence            99999999999997654333233333 48999999999999864

This family contains three types of fosfomycin resistant protein. Fosfomycin inhibits the enzyme UDP-N-acetylglucosamine-3-enolpyruvyltransferase (MurA), which catalyzes the first committed step in bacterial cell wall biosynthesis. The three types of fosfomycin resistance proteins, employ different mechanisms to render fosfomycin [(1R,2S)-epoxypropylphosphonic acid] inactive. FosB catalyzes the addition of L-cysteine to the epoxide ring of fosfomycin. FosX catalyzes the addition of a water molecule to the C1 position of the antibiotic with inversion of configuration at C1. FosA catalyzes the addition of glutathione to the antibiotic fosfomycin, making it inactive. Catalytic activities of both FosX and FosA are Mn(II)-dependent, but FosB is activated by Mg(II). Fosfomycin resistant proteins are evolutionarily related to glyoxalase I and type I extradiol dioxygenases.

>COG3324 Predicted enzyme related to lactoylglutathione lyase [General function prediction only]

Probab=99.62  E-value=1.4e-14  Score=104.07  Aligned_cols=120  Identities=27%  Similarity=0.370  Sum_probs=90.9

Q ss_pred             CCCceEEEeeeCChhhhHHHHHHhcCCeeeeeeccCCccceEEEeccccCCceeEEEEeeecCcceeecCcceeEEEEEe
Q 022818          151 PEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAIST  230 (291)
Q Consensus       151 ~~~~~~v~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~hi~~~v  230 (291)
                      ...+.|..|.++|++++++||.++|||+.....+..+..|..+.... .+..+... -  ...   ...+++.+++.|.|
T Consensus         7 ~~~i~w~Ei~~~D~~ra~~FY~~vFgW~~~~~~~~~~~~y~~f~~~~-~~~gG~l~-~--~~~---~~p~~~~~~iy~~v   79 (127)
T COG3324           7 KGTIVWFELPVSDLERAKAFYEKVFGWTFEDYFDMGEMRYAVFPADG-AGAGGGLM-A--RPG---SPPGGGGWVIYFAV   79 (127)
T ss_pred             CCccEEEeeecCCHHHHHHHHHHhhCceecccccCCCceEEEEECCC-ccccceec-c--CCc---CCCCCCCEEEEEec
Confidence            45688999999999999999999999998776655545554443332 12222221 1  111   11225668999999


Q ss_pred             cchHHhHHHHHHHHHHhCCeeecCCccCCCCCceEEEEECCCCceEEEeech
Q 022818          231 DDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNE  282 (291)
Q Consensus       231 ~di~~~~~~l~~~~~~~G~~~~~~~~~~~~~~~~~~~~~DpdG~~iel~~~~  282 (291)
                      +|++++++++    +++|.+++.++...|+ +++.+.+.||.||+|.|.+..
T Consensus        80 ~did~~l~rv----~~~GG~V~~p~~~~p~-~G~~a~~~Dp~Gn~~~l~s~~  126 (127)
T COG3324          80 DDIDATLERV----VAAGGKVLRPKTEFPG-GGRIAHFVDPEGNRFGLWSPA  126 (127)
T ss_pred             CChHHHHHHH----HhcCCeEEecccccCC-ceEEEEEECCCCCEEEEeecC
Confidence            9999999999    9999999999999886 369999999999999998753

>cd07267 THT_Oxygenase_N N-terminal domain of 2,4,5-trihydroxytoluene (THT) oxygenase

Probab=99.61  E-value=1.9e-14  Score=104.30  Aligned_cols=109  Identities=17%  Similarity=0.253  Sum_probs=76.9

Q ss_pred             CCceEEEeeeCChhhhHHHHHHhcCCeeeeeeccCCccceEEEeccccCCceeEEEEeeecCcceeecCcceeEEEEEec
Q 022818          152 EPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTD  231 (291)
Q Consensus       152 ~~~~~v~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~hi~~~v~  231 (291)
                      .++.|+.|.|+|++++.+||++ |||++..+..  +   . .++..++. ....+.+..       ...+++.|++|.|+
T Consensus         2 ~~l~hv~l~v~Dl~~s~~FY~~-lGl~~~~~~~--~---~-~~~~~~~~-~~~~~~~~~-------~~~~~~~~~af~v~   66 (113)
T cd07267           2 TDIAHVRFEHPDLDKAERFLTD-FGLEVAARTD--D---E-LYYRGYGT-DPFVYVARK-------GEKARFVGAAFEAA   66 (113)
T ss_pred             cEEEEEEEccCCHHHHHHHHHH-cCCEEEEecC--C---e-EEEecCCC-ccEEEEccc-------CCcCcccEEEEEEC
Confidence            3689999999999999999999 9999765421  1   2 22332211 122222111       12357789999999


Q ss_pred             chHHhHHHHHHHHHHhCCeeecCCccCCCCCceEEEEECCCCceEEEeec
Q 022818          232 DVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDN  281 (291)
Q Consensus       232 di~~~~~~l~~~~~~~G~~~~~~~~~~~~~~~~~~~~~DpdG~~iel~~~  281 (291)
                      |+++..+.+    +++|+.+...+. .++ +++++||+|||||.|||+..
T Consensus        67 ~~~~~~~~~----~~~g~~~~~~~~-~~~-~~~~~~~~DPdG~~iEl~~~  110 (113)
T cd07267          67 SRADLEKAA----ALPGASVIDDLE-APG-GGKRVTLTDPDGFPVELVYG  110 (113)
T ss_pred             CHHHHHHHH----HcCCCeeecCCC-CCC-CceEEEEECCCCCEEEEEec
Confidence            988888888    889998765443 344 45889999999999999764

This subfamily contains the N-terminal, non-catalytic, domain of THT oxygenase. THT oxygenase is an extradiol dioxygenase in the 2,4-dinitrotoluene (DNT) degradation pathway. It catalyzes the conversion of 2,4,5-trihydroxytoluene to an unstable ring fission product, 2,4-dihydroxy-5-methyl-6-oxo-2,4-hexadienoic acid. The native protein was determined to be a dimer by gel filtration. The enzyme belongs to the type I family of extradiol dioxygenases which contains two structurally homologous barrel-shaped domains at the N- and C-terminus of each monomer. The active-site metal is located in the C-terminal barrel. Fe(II) is required for its catalytic activity.

>TIGR03211 catechol_2_3 catechol 2,3 dioxygenase

Probab=99.61  E-value=4.1e-14  Score=120.66  Aligned_cols=119  Identities=18%  Similarity=0.282  Sum_probs=83.5

Q ss_pred             CcceeeEEEEEEeCCHHHHHHHHHhhcCCEEEEEeecCCCce-eEEEEecCCCCcceEEEeeecCCCCcccCCCC-ceEE
Q 022818           19 KDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKY-SNAFLGFGPEQSHFVVELTYNYGVTSYDIGTG-FGHF   96 (291)
Q Consensus        19 ~~~~~i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~-~~~i   96 (291)
                      ..+++|+||.|.|+|++++.+||+++|||+...+...+++.. ...++..+.. .+ .+.+...       .+.+ ++|+
T Consensus       141 ~~~~~i~Hi~l~V~Dl~~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~-------~~~g~~~Hi  211 (303)
T TIGR03211       141 VGARRLDHCLLYGEDVAENTRFFTEVLGFRLTEQVVLGDGKEQAAAWLSVSNK-AH-DIAFVGD-------PEPGKLHHV  211 (303)
T ss_pred             cCceeEEEEeEEeCCHHHHHHHHHHhcCCEEEeeEEcCCCcEEEEEEEEcCCC-Cc-ccceecC-------CCCCceEEE
Confidence            447899999999999999999999999999876544433322 2344443221 11 1111111       1224 8899


Q ss_pred             EEEeCC---HHHHHHHHHHcCCeeecCCeecCCCceEEEEEECCCCCEEEEEe
Q 022818           97 AIATED---VYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQ  146 (291)
Q Consensus        97 ~~~v~d---~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~Dp~G~~iel~~  146 (291)
                      ||.|+|   +++++++|+++|+++...|.....+...++||+||+||+||+..
T Consensus       212 af~v~~~~~v~~~~~~l~~~G~~~~~~p~~~~~~~~~~~y~~DPdG~~iEl~~  264 (303)
T TIGR03211       212 SFFLDSWEDVLKAADVMSKNDVSIDIGPTRHGITRGQTIYFFDPSGNRNETFG  264 (303)
T ss_pred             EEEcCCHHHHHHHHHHHHhCCCceeeCCcccCCCCceEEEEECCCCCEEEEec
Confidence            999986   55678899999999877765544333346999999999999983

Members of this family all are enzymes active as catechol 2,3 dioxygenase (1.13.11.2), although some members have highly significant activity on catechol derivatives such as 3-methylcatechol, 3-chlorocatechol, and 4-chlorocatechol (see Mars, et al.). This enzyme is also called metapyrocatechase, as it performs a meta-cleavage (an extradiol ring cleavage), in contrast to the ortho-cleavage (intradiol ring cleavage)performed by catechol 1,2-dioxygenase (EC 1.13.11.1), also called pyrocatechase.

>cd07262 Glo_EDI_BRP_like_19 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.60  E-value=2.8e-14  Score=105.02  Aligned_cols=114  Identities=24%  Similarity=0.241  Sum_probs=76.5

Q ss_pred             ceEEEeeeCChhhhHHHHHHh---cCCeeeeeeccCCccceEEEeccccCCceeEEEEeeecCcceeecCcceeEEEEEe
Q 022818          154 LCQVMLRVGDLGRSIKFYEKA---LGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAIST  230 (291)
Q Consensus       154 ~~~v~l~v~d~~~~~~fy~~~---lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~hi~~~v  230 (291)
                      +.|++|.|+|++++++||+++   ||+++....  .+  ..+. +..+.  ....+.+....+..+. ...+..|++|.|
T Consensus         1 l~hv~l~v~d~~~s~~FY~~~f~~lg~~~~~~~--~~--~~~~-~~~~~--~~~~~~l~~~~~~~~~-~~~~~~hi~f~v   72 (123)
T cd07262           1 IDHVTLGVNDLERARAFYDAVLAPLGIKRVMED--GP--GAVG-YGKGG--GGPDFWVTKPFDGEPA-TAGNGTHVAFAA   72 (123)
T ss_pred             CcEEEEecCcHHHHHHHHHHHHhhcCceEEeec--CC--ceeE-eccCC--CCceEEEeccccCCCC-CCCCceEEEEEC
Confidence            579999999999999999998   688876443  11  1222 33221  1344444333221111 223457999999


Q ss_pred             cc---hHHhHHHHHHHHHHhCCeeecCCccCCC--CCceEEEEECCCCceEEEe
Q 022818          231 DD---VYKSAEVVNLVTQELGGKITRQPGSIPG--LNTKITSFVDPDGWKTVLV  279 (291)
Q Consensus       231 ~d---i~~~~~~l~~~~~~~G~~~~~~~~~~~~--~~~~~~~~~DpdG~~iel~  279 (291)
                      ++   ++++++++    +++|+.+..+|...++  .+.+.+||+|||||.|||+
T Consensus        73 ~~~~~v~~~~~~~----~~~g~~~~~~~~~~~~~~~~~~~~~~~DPdG~~ie~~  122 (123)
T cd07262          73 PSREAVDAFHAAA----LAAGGTDEGAPGLRPHYGPGYYAAYVRDPDGNKIEAV  122 (123)
T ss_pred             CCHHHHHHHHHHH----HHcCCccCCCCCCCCCCCCCeEEEEEECCCCCEEEEe
Confidence            87   55556666    9999998888876654  2235689999999999996

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd07244 FosA FosA, a Fosfomycin resistance protein, catalyzes the addition of glutathione to the antibiotic fosfomycin, making it inactive

Probab=99.60  E-value=2.6e-14  Score=104.93  Aligned_cols=110  Identities=30%  Similarity=0.337  Sum_probs=76.6

Q ss_pred             CceEEEeeeCChhhhHHHHHHhcCCeeeeeeccCCccceEEEeccccCCceeEEEEeeecCcceeecCcceeEEEEEe--
Q 022818          153 PLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAIST--  230 (291)
Q Consensus       153 ~~~~v~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~hi~~~v--  230 (291)
                      ++.|+.|.|+|++++.+||+++|||++....+  +.    .++..+    ...+.+......   ...++..|++|.+  
T Consensus         1 ~i~hv~l~v~d~~~~~~FY~~vLG~~~~~~~~--~~----~~~~~~----~~~~~l~~~~~~---~~~~~~~hi~f~v~~   67 (121)
T cd07244           1 GINHITLAVSDLERSVAFYVDLLGFKLHVRWD--KG----AYLEAG----DLWLCLSVDANV---GPAKDYTHYAFSVSE   67 (121)
T ss_pred             CcceEEEEECCHHHHHHHHHHhcCCEEEEecC--Cc----eEEecC----CEEEEEecCCCC---CCCCCeeeEEEEeCH
Confidence            47899999999999999999999999765432  11    122221    123333221111   1235678999998  


Q ss_pred             cchHHhHHHHHHHHHHhCCeeecCCccCCCCCceEEEEECCCCceEEEeechh
Q 022818          231 DDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNED  283 (291)
Q Consensus       231 ~di~~~~~~l~~~~~~~G~~~~~~~~~~~~~~~~~~~~~DpdG~~iel~~~~~  283 (291)
                      +|++++++++    +++|+++..++.. +   ++.+||+|||||+|||+...-
T Consensus        68 ~dl~~~~~~l----~~~G~~~~~~~~~-~---~~~~~f~DPdG~~ie~~~~~~  112 (121)
T cd07244          68 EDFASLKEKL----RQAGVKEWKENTS-E---GDSFYFLDPDGHKLELHVGSL  112 (121)
T ss_pred             HHHHHHHHHH----HHcCCcccCCCCC-C---ccEEEEECCCCCEEEEEeCCH
Confidence            4677777777    9999998665443 1   368999999999999997643

This subfamily family contains FosA, a fosfomycin resistant protein. Fosfomycin inhibits the enzyme UDP-N-acetylglucosamine-3-enolpyruvyltransferase (MurA), which catalyzes the first committed step in bacterial cell wall biosynthesis. FosA, catalyzes the addition of glutathione to the antibiotic fosfomycin, (1R,2S)-epoxypropylphosphonic acid, making it inactive. FosA is a Mn(II) dependent enzyme. It is evolutionarily related to glyoxalase I and type I extradiol dioxygenases.

>cd08345 Fosfomycin_RP Fosfomycin resistant protein; inhibits the biological function of fosfomycin

Probab=99.60  E-value=1.7e-14  Score=104.43  Aligned_cols=109  Identities=23%  Similarity=0.352  Sum_probs=74.2

Q ss_pred             EEEeeeCChhhhHHHHHHhcCCeeeeeeccCCccceEEEeccccCCceeEEEEeeecCcceeecCcceeEEEEEec--ch
Q 022818          156 QVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTD--DV  233 (291)
Q Consensus       156 ~v~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~hi~~~v~--di  233 (291)
                      |+.|.|+|++++++||+++||+++....+  +  ...+.+.      ...+.+.......  ..+.+..|++|.|+  |+
T Consensus         1 Hv~l~v~d~~~s~~Fy~~~lg~~~~~~~~--~--~~~~~~~------~~~l~~~~~~~~~--~~~~~~~hiaf~v~~~d~   68 (113)
T cd08345           1 HITLIVKDLNKSIAFYRDILGAELIYSSS--K--EAYFELA------GLWICLMEEDSLQ--GPERTYTHIAFQIQSEEF   68 (113)
T ss_pred             CeeEEECCHHHHHHHHHHhcCCeeeeccC--c--eeEEEec------CeEEEeccCCCcC--CCCCCccEEEEEcCHHHH
Confidence            78999999999999999999999765432  1  1112111      2344443222111  12346789999995  57


Q ss_pred             HHhHHHHHHHHHHhCCeeecCCccCCCCCceEEEEECCCCceEEEeec
Q 022818          234 YKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDN  281 (291)
Q Consensus       234 ~~~~~~l~~~~~~~G~~~~~~~~~~~~~~~~~~~~~DpdG~~iel~~~  281 (291)
                      +++++++    +++|+++...+...+. .++.+|++|||||+|||+..
T Consensus        69 ~~~~~~l----~~~G~~~~~~~~~~~~-~~~~~~~~DPdG~~iEi~~~  111 (113)
T cd08345          69 DEYTERL----KALGVEMKPERPRVQG-EGRSIYFYDPDGHLLELHAG  111 (113)
T ss_pred             HHHHHHH----HHcCCccCCCccccCC-CceEEEEECCCCCEEEEEeC
Confidence            7777777    9999998654333222 35889999999999999854

This family contains three types of fosfomycin resistant protein. Fosfomycin inhibits the enzyme UDP-N-acetylglucosamine-3-enolpyruvyltransferase (MurA), which catalyzes the first committed step in bacterial cell wall biosynthesis. The three types of fosfomycin resistance proteins, employ different mechanisms to render fosfomycin [(1R,2S)-epoxypropylphosphonic acid] inactive. FosB catalyzes the addition of L-cysteine to the epoxide ring of fosfomycin. FosX catalyzes the addition of a water molecule to the C1 position of the antibiotic with inversion of configuration at C1. FosA catalyzes the addition of glutathione to the antibiotic fosfomycin, making it inactive. Catalytic activities of both FosX and FosA are Mn(II)-dependent, but FosB is activated by Mg(II). Fosfomycin resistant proteins are evolutionarily related to glyoxalase I and type I extradiol dioxygenases.

>cd08350 BLMT_like BLMT, a bleomycin resistance protein encoded on the transposon Tn5, and similar proteins

Probab=99.59  E-value=2.8e-14  Score=104.60  Aligned_cols=108  Identities=19%  Similarity=0.158  Sum_probs=76.2

Q ss_pred             EEEeeeCChhhhHHHHHHhcCCeeeeeeccCCccceEEEeccccCCceeEEEEeeecCcceeecCcceeEEEEEecchHH
Q 022818          156 QVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDVYK  235 (291)
Q Consensus       156 ~v~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~hi~~~v~di~~  235 (291)
                      ...|.|+|++++++||++ |||++......     .++.+..+    +..+.+.......   ......|++|.|+|+++
T Consensus         5 ~~~l~v~Dl~~s~~FY~~-lG~~~~~~~~~-----~~~~~~~~----~~~l~l~~~~~~~---~~~~~~~~~~~v~dvd~   71 (120)
T cd08350           5 IPNLPSRDLDATEAFYAR-LGFSVGYRQAA-----GYMILRRG----DLELHFFAHPDLD---PATSPFGCCLRLPDVAA   71 (120)
T ss_pred             cceeEcCCHHHHHHHHHH-cCCEEEecCCC-----CEEEEEcC----CEEEEEEecCcCC---CCCCcceEEEEeCCHHH
Confidence            357899999999999999 99997654321     23333322    2455554432111   11234689999999999


Q ss_pred             hHHHHHHHHHHhCCeee-------cCCccCCCCCceEEEEECCCCceEEEeec
Q 022818          236 SAEVVNLVTQELGGKIT-------RQPGSIPGLNTKITSFVDPDGWKTVLVDN  281 (291)
Q Consensus       236 ~~~~l~~~~~~~G~~~~-------~~~~~~~~~~~~~~~~~DpdG~~iel~~~  281 (291)
                      ++++|    +++|+++.       .+|...++ +.+.++|+|||||+|||.|.
T Consensus        72 ~~~~l----~~~G~~~~~~~~~~~~~~~~~~~-g~~~~~~~DPdG~~ie~~~~  119 (120)
T cd08350          72 LHAEF----RAAGLPETGSGIPRITPPEDQPW-GMREFALVDPDGNLLRFGQP  119 (120)
T ss_pred             HHHHH----HHhCccccccCCCcccCCcCCCC-ceeEEEEECCCCCEEEeecC
Confidence            99999    99999743       33444444 56899999999999999874

BLMT is a bleomycin (Bm) resistance protein, encoded by the ble gene on the transposon Tn5. This protein confers a survival advantage to Escherichia coli host cells. Bm is a glycopeptide antibiotic produced naturally by actinomycetes. It is a potent anti-cancer drug, which acts as a strong DNA-cutting agent, thereby causing cell death. BLMT has strong binding affinity to Bm and it protects against this lethal compound through drug sequestering. BLMT has two identically-folded subdomains, with the same alpha/beta fold; these two halves have no sequence similarity. BLMT is a dimer with two Bm-binding pockets formed at the dimer interface.

>cd07244 FosA FosA, a Fosfomycin resistance protein, catalyzes the addition of glutathione to the antibiotic fosfomycin, making it inactive

Probab=99.59  E-value=3.5e-14  Score=104.24  Aligned_cols=109  Identities=28%  Similarity=0.463  Sum_probs=77.7

Q ss_pred             eeEEEEEEeCCHHHHHHHHHhhcCCEEEEEeecCCCceeEEEEecCCCCcceEEEeeecCCCCcccCCCCceEEEEEe--
Q 022818           23 RFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIAT--  100 (291)
Q Consensus        23 ~i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~~~~i~~~v--  100 (291)
                      +|+|+.|.|+|++++.+||+++||+++....+  +    ..++..++  ..+.+......     ....+..|++|.+  
T Consensus         1 ~i~hv~l~v~d~~~~~~FY~~vLG~~~~~~~~--~----~~~~~~~~--~~~~l~~~~~~-----~~~~~~~hi~f~v~~   67 (121)
T cd07244           1 GINHITLAVSDLERSVAFYVDLLGFKLHVRWD--K----GAYLEAGD--LWLCLSVDANV-----GPAKDYTHYAFSVSE   67 (121)
T ss_pred             CcceEEEEECCHHHHHHHHHHhcCCEEEEecC--C----ceEEecCC--EEEEEecCCCC-----CCCCCeeeEEEEeCH
Confidence            47999999999999999999999999865432  1    23444332  22222221111     1234678999998  


Q ss_pred             CCHHHHHHHHHHcCCeeecCCeecCCCceEEEEEECCCCCEEEEEeCC
Q 022818          101 EDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRG  148 (291)
Q Consensus       101 ~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~Dp~G~~iel~~~~  148 (291)
                      +|+++++++++++|+++...+..  .+  ..+||.||+||+||+++..
T Consensus        68 ~dl~~~~~~l~~~G~~~~~~~~~--~~--~~~~f~DPdG~~ie~~~~~  111 (121)
T cd07244          68 EDFASLKEKLRQAGVKEWKENTS--EG--DSFYFLDPDGHKLELHVGS  111 (121)
T ss_pred             HHHHHHHHHHHHcCCcccCCCCC--Cc--cEEEEECCCCCEEEEEeCC
Confidence            57999999999999987654332  22  2489999999999999764

This subfamily family contains FosA, a fosfomycin resistant protein. Fosfomycin inhibits the enzyme UDP-N-acetylglucosamine-3-enolpyruvyltransferase (MurA), which catalyzes the first committed step in bacterial cell wall biosynthesis. FosA, catalyzes the addition of glutathione to the antibiotic fosfomycin, (1R,2S)-epoxypropylphosphonic acid, making it inactive. FosA is a Mn(II) dependent enzyme. It is evolutionarily related to glyoxalase I and type I extradiol dioxygenases.

>cd07235 MRD Mitomycin C resistance protein (MRD)

Probab=99.59  E-value=4e-14  Score=104.07  Aligned_cols=115  Identities=20%  Similarity=0.213  Sum_probs=76.8

Q ss_pred             eEEEEEEeCCHHHHHHHHHhhcCCEEEEEeecCCCceeEEEEecCCCCcceEEEeeecC---CCCcccCCCCceEEEEEe
Q 022818           24 FLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNY---GVTSYDIGTGFGHFAIAT  100 (291)
Q Consensus        24 i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~---~~~~~~~g~~~~~i~~~v  100 (291)
                      ++||.|.|+|+++|++||++ |||++......    .....+..++ ...+.+......   .......+.+..+++|.+
T Consensus         1 ~~~i~l~V~D~~~a~~FY~~-LGf~~~~~~~~----~~~~~~~~~~-~~~l~l~~~~~~~~~~~~~~~~~~~~~~l~~~~   74 (122)
T cd07235           1 LDAVGIVVADMAKSLDFYRR-LGFDFPEEADD----EPHVEAVLPG-GVRLAWDTVESIRSFTPGWTPTGGHRIALAFLC   74 (122)
T ss_pred             CceEEEEeccHHHHHHHHHH-hCceecCCcCC----CCcEEEEeCC-CEEEEEEcccceeeecCCCCCCCCCcEEEEEEc
Confidence            57999999999999999975 99997543221    1122233321 122222111000   000001223456788876


Q ss_pred             C---CHHHHHHHHHHcCCeeecCCeecCCCceEEEEEECCCCCEEEEE
Q 022818          101 E---DVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELI  145 (291)
Q Consensus       101 ~---d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~Dp~G~~iel~  145 (291)
                      .   |+++++++|+++|+++..+|...++|.+. ++++||+||+|+|+
T Consensus        75 ~~~~dvd~~~~~l~~~G~~~~~~~~~~~~g~~~-~~~~DPdG~~iel~  121 (122)
T cd07235          75 ETPAEVDALYAELVGAGYPGHKEPWDAPWGQRY-AIVKDPDGNLVDLF  121 (122)
T ss_pred             CCHHHHHHHHHHHHHCCCCcCCCCccCCCCCEE-EEEECCCCCEEEEe
Confidence            4   89999999999999988888888887654 89999999999986

Mitomycin C (MC) is a naturally occurring antibiotic, and antitumor agent used in the treatment of cancer. Its antitumor activity is exerted primarily through monofunctional and bifunctional alkylation of DNA. MRD binds to MC and functions as a component of the MC exporting system. MC is bound to MRD by a stacking interaction between a His and a Trp. MRD adopts a structural fold similar to bleomycin resistance protein, glyoxalase I, and extradiol dioxygenases; and it has binding sites at an identical location to binding sites in these evolutionarily related enzymes.

>TIGR02295 HpaD 3,4-dihydroxyphenylacetate 2,3-dioxygenase

Probab=99.59  E-value=7.2e-14  Score=118.68  Aligned_cols=121  Identities=24%  Similarity=0.351  Sum_probs=84.8

Q ss_pred             CcceeeEEEEEEeCCHHHHHHHHHhhcCCEEEEEeecCCCceeEEEEecCCCCcceEEEeeecCCCCcccCCCCceEEEE
Q 022818           19 KDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAI   98 (291)
Q Consensus        19 ~~~~~i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~~~~i~~   98 (291)
                      ..+++|+||+|.|+|++++.+||+++||++...+...+.+.....++..+..  ...+.+...       .+.+++|+||
T Consensus       132 ~~~~~i~Hv~l~v~dl~~a~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~-------~~~~~~Hiaf  202 (294)
T TIGR02295       132 VSPVRLDHFNVFVPDVQRALRFYKEELGFRVTEYTEDDEGNLAAAWLHRKGG--VHDIALTNG-------NGPRLHHIAY  202 (294)
T ss_pred             ccceeeeeEEEEeCCHHHHHHHHHHhcCCEEEEEeccCCCcEEEEEEecCCC--cCceEeecC-------CCCceeeEEE
Confidence            3578999999999999999999999999998765433333333444433221  112222211       2358999999


Q ss_pred             EeCC---HHHHHHHHHHcCCe--eecCCeecCCCceEEEEEECCCCCEEEEEeCC
Q 022818           99 ATED---VYKLVENIRAKGGN--VTREPGPLKGGTTHIAFVKDPDGYIFELIQRG  148 (291)
Q Consensus        99 ~v~d---~~~~~~~l~~~G~~--~~~~~~~~~~g~~~~~~~~Dp~G~~iel~~~~  148 (291)
                      .|+|   ++++.++|+++|++  +...|.....+...++|++||+||+||+....
T Consensus       203 ~v~d~~~v~~~~~~l~~~G~~~~~~~~p~~~~~~~~~~~y~~DP~G~~iEl~~~~  257 (294)
T TIGR02295       203 WVHDPLNIIKACDILASAGLSDSIERGPGRHGVSNAFFLYLRDPDGHRIELYTGD  257 (294)
T ss_pred             EcCCHHHHHHHHHHHHhCCCCcccccCCccCCCCcceEEEEECCCCCEEEEEecc
Confidence            9998   55678999999987  54455443333444689999999999998754

The enzyme from Bacillus brevis contains manganese.

>cd07262 Glo_EDI_BRP_like_19 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.59  E-value=6.2e-14  Score=103.16  Aligned_cols=114  Identities=25%  Similarity=0.266  Sum_probs=77.8

Q ss_pred             eEEEEEEeCCHHHHHHHHHhh---cCCEEEEEeecCCCceeEEEEecCCCCcceEEEeeecCCCCcccCCCCceEEEEEe
Q 022818           24 FLHAVYRVGDLDRTIKFYTEC---FGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIAT  100 (291)
Q Consensus        24 i~hv~l~v~d~~~~~~FY~~~---lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~~~~i~~~v  100 (291)
                      |+|+.|.|+|++++++||+++   ||++...+.  .+ .  .+.+..+...  ..+.+......... ...+..|++|.|
T Consensus         1 l~hv~l~v~d~~~s~~FY~~~f~~lg~~~~~~~--~~-~--~~~~~~~~~~--~~~~l~~~~~~~~~-~~~~~~hi~f~v   72 (123)
T cd07262           1 IDHVTLGVNDLERARAFYDAVLAPLGIKRVMED--GP-G--AVGYGKGGGG--PDFWVTKPFDGEPA-TAGNGTHVAFAA   72 (123)
T ss_pred             CcEEEEecCcHHHHHHHHHHHHhhcCceEEeec--CC-c--eeEeccCCCC--ceEEEeccccCCCC-CCCCceEEEEEC
Confidence            579999999999999999998   699886543  11 1  2233322222  23333332211111 222457999999


Q ss_pred             CC---HHHHHHHHHHcCCeeecCCeecCC--CceEEEEEECCCCCEEEEE
Q 022818          101 ED---VYKLVENIRAKGGNVTREPGPLKG--GTTHIAFVKDPDGYIFELI  145 (291)
Q Consensus       101 ~d---~~~~~~~l~~~G~~~~~~~~~~~~--g~~~~~~~~Dp~G~~iel~  145 (291)
                      ++   ++++++++.++|+.+...|...++  ...+.+||+||+||.||++
T Consensus        73 ~~~~~v~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~DPdG~~ie~~  122 (123)
T cd07262          73 PSREAVDAFHAAALAAGGTDEGAPGLRPHYGPGYYAAYVRDPDGNKIEAV  122 (123)
T ss_pred             CCHHHHHHHHHHHHHcCCccCCCCCCCCCCCCCeEEEEEECCCCCEEEEe
Confidence            86   788999999999998877766553  2333489999999999987

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd08349 BLMA_like Bleomycin binding protein (BLMA) and similar proteins; BLMA confers bleomycin (Bm) resistance by directly binding to Bm

Probab=99.59  E-value=9.1e-14  Score=100.36  Aligned_cols=109  Identities=28%  Similarity=0.402  Sum_probs=78.4

Q ss_pred             EEEeCCHHHHHHHHHhhcCCEEEEEeecCCCceeEEEEecCCCCcceEEEeeecCCCCcccCCCCceEEEEEeCCHHHHH
Q 022818           28 VYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIATEDVYKLV  107 (291)
Q Consensus        28 ~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~~~~i~~~v~d~~~~~  107 (291)
                      .|.|+|++++++||+++|||+......  ..  ...++..+  .  ..+.+......... ...+..|++|.++|+++++
T Consensus         3 ~i~v~d~~~s~~FY~~~lg~~~~~~~~--~~--~~~~~~~~--~--~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~   73 (112)
T cd08349           3 VLPVSDIERSLAFYRDVLGFEVDWEHP--EP--GYAFLSRG--G--AQLMLSEHDGDEPV-PLGRGGSVYIEVEDVDALY   73 (112)
T ss_pred             EEEECCHHHHHHHHHhccCeEEEEEcC--CC--cEEEEEeC--C--EEEEEeccCCCCCC-CCCCcEEEEEEeCCHHHHH
Confidence            689999999999999999999876543  12  23444432  2  23333332222111 2346668999999999999


Q ss_pred             HHHHHcCCe-eecCCeecCCCceEEEEEECCCCCEEEEEe
Q 022818          108 ENIRAKGGN-VTREPGPLKGGTTHIAFVKDPDGYIFELIQ  146 (291)
Q Consensus       108 ~~l~~~G~~-~~~~~~~~~~g~~~~~~~~Dp~G~~iel~~  146 (291)
                      +++++.|++ +..++...++|... ++++||+|+.|+|+|
T Consensus        74 ~~l~~~G~~~~~~~~~~~~~g~~~-~~~~DP~G~~ie~~~  112 (112)
T cd08349          74 AELKAKGADLIVYPPEDQPWGMRE-FAVRDPDGNLLRFGE  112 (112)
T ss_pred             HHHHHcCCcceecCccCCCcccEE-EEEECCCCCEEEecC
Confidence            999999998 66666666666554 889999999999975

BLMA also called Bleomycin resistance protein, confers Bm resistance by directly binding to Bm. Bm is a glycopeptide antibiotic produced naturally by actinomycetes. It is a potent anti-cancer drug, which acts as a strong DNA-cutting agent, thereby causing cell death. BLMA is produced by actinomycetes to protect themselves against their own lethal compound. BLMA has two identically-folded subdomains, with the same alpha/beta fold; these two halves have no sequence similarity. BLMAs are dimers and each dimer binds to two Bm molecules at the Bm-binding pockets formed at the dimer interface; two Bm molecules are bound per dimer. BLMA belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. As for the large

>cd08354 Glo_EDI_BRP_like_13 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.59  E-value=6.7e-14  Score=102.72  Aligned_cols=113  Identities=28%  Similarity=0.463  Sum_probs=79.0

Q ss_pred             eEEEEEEeCCHHHHHHHHHhhcCCEEEEEeecCCCceeEEEEecCCCCcceEEEeeecCCCC------cccCCCCceEEE
Q 022818           24 FLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVT------SYDIGTGFGHFA   97 (291)
Q Consensus        24 i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~------~~~~g~~~~~i~   97 (291)
                      +.|+.|.|+|++++++||+++|||++..+   +++.  ..++..++. ..  +.+.......      ......+..|++
T Consensus         1 ~~~~~l~v~d~~~s~~Fy~~~lG~~~~~~---~~~~--~~~l~~~~~-~~--~~l~~~~~~~~~~~~~~~~~~~~~~~~~   72 (122)
T cd08354           1 ILETALYVDDLEAAEAFYEDVLGLELMLK---EDRR--LAFFWVGGR-GM--LLLFDPGATSTPGGEIPPHGGSGPGHFA   72 (122)
T ss_pred             CeEEEEEeCCHHHHHHHHHhccCCEEeec---CCCc--eEEEEcCCC-cE--EEEEecCCcccccCCCCCCCCCCccEEE
Confidence            46899999999999999999999998764   1222  345555443 22  2222211110      111234678999


Q ss_pred             EEe--CCHHHHHHHHHHcCCeeecCCeecCCCceEEEEEECCCCCEEEEEe
Q 022818           98 IAT--EDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQ  146 (291)
Q Consensus        98 ~~v--~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~Dp~G~~iel~~  146 (291)
                      |.+  +|++++++++.++|+++...+. ..++... ++++||+|++||+++
T Consensus        73 ~~v~~~dl~~~~~~l~~~g~~~~~~~~-~~~~~~~-~~~~DP~G~~ie~~~  121 (122)
T cd08354          73 FAIPAEELAEWEAHLEAKGVAIESEVQ-WPRGGRS-LYFRDPDGNLLELAT  121 (122)
T ss_pred             EEcCHHHHHHHHHHHHhcCCceecccc-CCCCeeE-EEEECCCCCEEEEec
Confidence            998  5799999999999998876554 3344444 899999999999985

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd07261 Glo_EDI_BRP_like_11 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.59  E-value=3.3e-14  Score=103.20  Aligned_cols=108  Identities=26%  Similarity=0.275  Sum_probs=75.7

Q ss_pred             EEeeeCChhhhHHHHHHhcCCeeeeeeccCCccceEEEeccccCCceeEEEEeeecCcce-eecCcceeEEEEEecc---
Q 022818          157 VMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTE-YTKGNAYAQVAISTDD---  232 (291)
Q Consensus       157 v~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~-~~~~~~~~hi~~~v~d---  232 (291)
                      +.|.|+|++++++||+++||+++....    ..+..+...  +   ...+.+........ .....+..|++|.+++   
T Consensus         2 ~~l~v~d~~~a~~FY~~~lg~~~~~~~----~~~~~~~~~--~---~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~~~~~   72 (114)
T cd07261           2 VLLYVEDPAASAEFYSELLGREPVELS----PTFALFVLG--S---GVKLGLWSRHTVEPASDATGGGSELAFMVDDGAA   72 (114)
T ss_pred             EEEEECCHHHHHHHHHHHcCCCccCCC----CceEEEEeC--C---CcEEEEeeccccCCCCCCCCCceEEEEEcCCHHH
Confidence            578999999999999999999976432    123332222  2   23444433322111 1123466899999986   


Q ss_pred             hHHhHHHHHHHHHHhCCeeecCCccCCCCCceEEEEECCCCceEEEe
Q 022818          233 VYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLV  279 (291)
Q Consensus       233 i~~~~~~l~~~~~~~G~~~~~~~~~~~~~~~~~~~~~DpdG~~iel~  279 (291)
                      ++++++++    +++|+++..+|...++  ++.++|+|||||+|||+
T Consensus        73 ~~~~~~~~----~~~g~~v~~~~~~~~~--g~~~~~~DPdGn~ie~~  113 (114)
T cd07261          73 VDALYAEW----QAKGVKIIQEPTEMDF--GYTFVALDPDGHRLRVF  113 (114)
T ss_pred             HHHHHHHH----HHCCCeEecCccccCC--ccEEEEECCCCCEEEee
Confidence            66666666    9999999988887766  36789999999999996

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd07254 Glo_EDI_BRP_like_20 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.59  E-value=7.8e-14  Score=102.19  Aligned_cols=112  Identities=24%  Similarity=0.395  Sum_probs=77.6

Q ss_pred             EEEEEEeCCHHHHHHHHHhhcCCEEEEEeecCCCceeEEEEecCCCCcceEEEeeecCCCCcccCCCCceEEEEEeCC--
Q 022818           25 LHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIATED--  102 (291)
Q Consensus        25 ~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~~~~i~~~v~d--  102 (291)
                      .|+.|.|+|++++.+||+++||++...+.+  +   ...+ ..++.  .+.+.+..+...    ...+..|++|.|++  
T Consensus         3 ~hv~l~v~d~~~a~~FY~~~lG~~~~~~~~--~---~~~~-~~~~~--~~~~~~~~~~~~----~~~~~~h~~f~v~~~~   70 (120)
T cd07254           3 FHVALNVDDLEASIAFYSKLFGVEPTKVRD--D---YAKF-LLEDP--RLNFVLNERPGA----PGGGLNHLGVQVDSAE   70 (120)
T ss_pred             EEEEEEeCCHHHHHHHHHHHhCCeEecccC--C---eeEE-EecCC--ceEEEEecCCCC----CCCCeeEEEEEeCCHH
Confidence            599999999999999999999998765421  1   1222 22222  222333222111    11478899999987  


Q ss_pred             -HHHHHHHHHHcCCeeecCCeecCC-CceEEEEEECCCCCEEEEEeCC
Q 022818          103 -VYKLVENIRAKGGNVTREPGPLKG-GTTHIAFVKDPDGYIFELIQRG  148 (291)
Q Consensus       103 -~~~~~~~l~~~G~~~~~~~~~~~~-g~~~~~~~~Dp~G~~iel~~~~  148 (291)
                       ++++++++.++|+++...+....+ +..+.++++||+||+|||+...
T Consensus        71 dl~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~DP~G~~ie~~~~~  118 (120)
T cd07254          71 EVAEAKARAEAAGLPTFKEEDTTCCYAVQDKVWVTDPDGNAWEVFVTL  118 (120)
T ss_pred             HHHHHHHHHHHcCCeEEccCCcccccCCcceEEEECCCCCEEEEEEee
Confidence             788999999999998776543322 2233588999999999999754

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and types I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>cd07235 MRD Mitomycin C resistance protein (MRD)

Probab=99.58  E-value=3e-14  Score=104.72  Aligned_cols=113  Identities=19%  Similarity=0.180  Sum_probs=75.0

Q ss_pred             ceEEEeeeCChhhhHHHHHHhcCCeeeeeeccCCccceEEEeccccCCceeEEEEeeec-----CcceeecCcceeEEEE
Q 022818          154 LCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNY-----GVTEYTKGNAYAQVAI  228 (291)
Q Consensus       154 ~~~v~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~-----~~~~~~~~~~~~hi~~  228 (291)
                      +.||+|.|+|+++|++||+. |||++......  .  ....+..+.   +..+.+....     .+.....+.+..|++|
T Consensus         1 ~~~i~l~V~D~~~a~~FY~~-LGf~~~~~~~~--~--~~~~~~~~~---~~~l~l~~~~~~~~~~~~~~~~~~~~~~l~~   72 (122)
T cd07235           1 LDAVGIVVADMAKSLDFYRR-LGFDFPEEADD--E--PHVEAVLPG---GVRLAWDTVESIRSFTPGWTPTGGHRIALAF   72 (122)
T ss_pred             CceEEEEeccHHHHHHHHHH-hCceecCCcCC--C--CcEEEEeCC---CEEEEEEcccceeeecCCCCCCCCCcEEEEE
Confidence            47999999999999999975 99987533221  1  111122111   1222221110     0000012234568888


Q ss_pred             Eec---chHHhHHHHHHHHHHhCCeeecCCccCCCCCceEEEEECCCCceEEEe
Q 022818          229 STD---DVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLV  279 (291)
Q Consensus       229 ~v~---di~~~~~~l~~~~~~~G~~~~~~~~~~~~~~~~~~~~~DpdG~~iel~  279 (291)
                      .+.   |+++++++|    +++|+++..+|...++ +.+.++|+|||||.|||+
T Consensus        73 ~~~~~~dvd~~~~~l----~~~G~~~~~~~~~~~~-g~~~~~~~DPdG~~iel~  121 (122)
T cd07235          73 LCETPAEVDALYAEL----VGAGYPGHKEPWDAPW-GQRYAIVKDPDGNLVDLF  121 (122)
T ss_pred             EcCCHHHHHHHHHHH----HHCCCCcCCCCccCCC-CCEEEEEECCCCCEEEEe
Confidence            875   788888888    9999999888887776 458899999999999996

Mitomycin C (MC) is a naturally occurring antibiotic, and antitumor agent used in the treatment of cancer. Its antitumor activity is exerted primarily through monofunctional and bifunctional alkylation of DNA. MRD binds to MC and functions as a component of the MC exporting system. MC is bound to MRD by a stacking interaction between a His and a Trp. MRD adopts a structural fold similar to bleomycin resistance protein, glyoxalase I, and extradiol dioxygenases; and it has binding sites at an identical location to binding sites in these evolutionarily related enzymes.

>KOG2943 consensus Predicted glyoxalase [Carbohydrate transport and metabolism]

Probab=99.58  E-value=8e-15  Score=113.68  Aligned_cols=128  Identities=38%  Similarity=0.663  Sum_probs=107.9

Q ss_pred             CCCCceEEEeeeCChhhhHHHHHHhcCCeeeeeeccCC-----------ccceEEEeccccCCceeEEEEeeecCcceee
Q 022818          150 TPEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPE-----------YKYTLAMLGYAEEDQTTVLELTYNYGVTEYT  218 (291)
Q Consensus       150 ~~~~~~~v~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~  218 (291)
                      ...+..|+.+.|.|.+++++||+++||+++.+..+.++           ++|+-.|++++++..++.+||+.|++-..+.
T Consensus        14 ~~~r~LH~VfkVgdr~kti~Fyt~vlgMkvLRheef~egc~aacngpyd~kwSktmvGyGpEdshFViELTYNYgV~~Ye   93 (299)
T KOG2943|consen   14 DTRRALHYVFKVGDRAKTIDFYTEVLGMKVLRHEEFEEGCEAACNGPYDGKWSKTMVGYGPEDSHFVIELTYNYGVSKYE   93 (299)
T ss_pred             cchheeeEeEeecchHHHHHHHHHhhcceeeehhhhhhhhhhhcCCCcccchhhhheecCCCcccEEEEEEeccCcccee
Confidence            34578899999999999999999999999887665555           6888899999999999999999999999999


Q ss_pred             cCcceeEEEEEecchHHhHHHHHHHHHHhCCeeecCCccCCCCCceEEEEECCCCceEEEeechhhhhhhhc
Q 022818          219 KGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNEDFLKELQS  290 (291)
Q Consensus       219 ~~~~~~hi~~~v~di~~~~~~l~~~~~~~G~~~~~~~~~~~~~~~~~~~~~DpdG~~iel~~~~~~~~~~~~  290 (291)
                      -|+++.||.+.++|+-..++.+    +..|.+         ..+.-.+++.||||+.|++.++.+.-+++|+
T Consensus        94 lGndfg~i~I~s~dv~~~ve~v----~~p~~~---------~~g~~~~~v~dPdGykF~l~~~~p~s~pv~~  152 (299)
T KOG2943|consen   94 LGNDFGGITIASDDVFSKVEKV----NAPGGK---------GSGCGIAFVKDPDGYKFYLIDRGPQSDPVLQ  152 (299)
T ss_pred             ccCCcccEEEeHHHHHHHHHHh----cCcCCc---------ccceEEEEEECCCCcEEEEeccCCCCCCeEE
Confidence            9999999999999988888888    554432         1123568899999999999998777677664

>cd09012 Glo_EDI_BRP_like_24 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.58  E-value=3.8e-14  Score=104.49  Aligned_cols=112  Identities=23%  Similarity=0.215  Sum_probs=75.2

Q ss_pred             eEEEeeeCChhhhHHHHHHhcCCeeeeeeccCCccceEEEeccccCCceeEEEEeeecCc------ce-eecCcceeEEE
Q 022818          155 CQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGV------TE-YTKGNAYAQVA  227 (291)
Q Consensus       155 ~~v~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~------~~-~~~~~~~~hi~  227 (291)
                      .+++|.|+|++++++||++ |||++......+.  ...+..+  +   ...+.+......      .. ...+.+..|++
T Consensus         2 ~~v~l~V~Dl~~s~~FY~~-lGf~~~~~~~~~~--~~~~~~~--~---~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~l~   73 (124)
T cd09012           2 IFINLPVKDLEKSTAFYTA-LGFEFNPQFSDEK--AACMVIS--D---NIFVMLLTEDFFQTFTPKPIADTKKSTEVLIS   73 (124)
T ss_pred             EEEEeecCCHHHHHHHHHH-CCCEEccccCCCC--eEEEEEC--C---ceEEEEEcHHHHhhccCCCcccCCCCCeEEEE
Confidence            5789999999999999976 9999764332222  1222221  1   233444321100      00 01234567999


Q ss_pred             EEecc---hHHhHHHHHHHHHHhCCeeecCCccCCCCCceEEEEECCCCceEEEee
Q 022818          228 ISTDD---VYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVD  280 (291)
Q Consensus       228 ~~v~d---i~~~~~~l~~~~~~~G~~~~~~~~~~~~~~~~~~~~~DpdG~~iel~~  280 (291)
                      |.|++   ++++++++    +++|+++..+|...++  .+.+||+|||||+|||+.
T Consensus        74 f~v~~~~~vd~~~~~l----~~~G~~i~~~p~~~~~--~~~~~~~DPdG~~ie~~~  123 (124)
T cd09012          74 LSADSREEVDELVEKA----LAAGGKEFREPQDHGF--MYGRSFADLDGHLWEVLW  123 (124)
T ss_pred             EeCCCHHHHHHHHHHH----HHCCCcccCCcccCCc--eEEEEEECCCCCEEEEEE
Confidence            99984   66777777    9999999888877665  467899999999999974

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd08357 Glo_EDI_BRP_like_18 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.58  E-value=3e-14  Score=105.06  Aligned_cols=113  Identities=19%  Similarity=0.205  Sum_probs=73.0

Q ss_pred             EEEeeeCChhhhHHHHHHhcCCeeeeeeccCCccceEEEeccccCCceeEEEEeeecCcc----e-eecCcceeEEE--E
Q 022818          156 QVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVT----E-YTKGNAYAQVA--I  228 (291)
Q Consensus       156 ~v~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~----~-~~~~~~~~hi~--~  228 (291)
                      |+.|.|+|++++++||+++|||++.....      .+..+...+  ....+.+.......    . .....+..|++  |
T Consensus         2 Hi~l~v~Dl~~s~~FY~~~lG~~~~~~~~------~~~~~~~~~--~~~~l~~~~~~~~~~~~~~~~~~~~~~~h~~~~~   73 (125)
T cd08357           2 HLAIPVRDLEAARAFYGDVLGCKEGRSSE------TWVDFDFFG--HQLVAHLSPNFNADASDNAVDGHPVPVPHFGLIL   73 (125)
T ss_pred             eEEEEeCCHHHHHHHHHHhcCCEEeeccC------CcccccccC--cEEEEEeccCCCcccccCCCCCCccCCceEEEEE
Confidence            89999999999999999999999754321      112222111  12222222111000    0 01122445765  4


Q ss_pred             EecchHHhHHHHHHHHHHhCCeeecCCccCC---CCCceEEEEECCCCceEEEee
Q 022818          229 STDDVYKSAEVVNLVTQELGGKITRQPGSIP---GLNTKITSFVDPDGWKTVLVD  280 (291)
Q Consensus       229 ~v~di~~~~~~l~~~~~~~G~~~~~~~~~~~---~~~~~~~~~~DpdG~~iel~~  280 (291)
                      .++|+++++++|    +++|+++..+|....   .++.+.+|++|||||+|||..
T Consensus        74 ~~~dv~~~~~~l----~~~g~~~~~~p~~~~~~~~~~~~~~~~~DPdG~~iE~~~  124 (125)
T cd08357          74 SEEEFDALAERL----EAAGVEFLIEPYTRFEGQPGEQETFFLKDPSGNALEFKA  124 (125)
T ss_pred             eHHHHHHHHHHH----HHCCCcEecCcceeccCCcCceeEEEEECCCCCEEEEee
Confidence            567899999999    999999987775421   223588999999999999974

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>cd08354 Glo_EDI_BRP_like_13 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.57  E-value=6e-14  Score=102.98  Aligned_cols=114  Identities=21%  Similarity=0.260  Sum_probs=77.4

Q ss_pred             ceEEEeeeCChhhhHHHHHHhcCCeeeeeeccCCccceEEEeccccCCceeEEEEeeecCcc------eeecCcceeEEE
Q 022818          154 LCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVT------EYTKGNAYAQVA  227 (291)
Q Consensus       154 ~~~v~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~------~~~~~~~~~hi~  227 (291)
                      +.+|.|.|.|++++.+||+++|||++...   .+..+  .++..++.   ..+.+.......      ......+..|++
T Consensus         1 ~~~~~l~v~d~~~s~~Fy~~~lG~~~~~~---~~~~~--~~l~~~~~---~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~   72 (122)
T cd08354           1 ILETALYVDDLEAAEAFYEDVLGLELMLK---EDRRL--AFFWVGGR---GMLLLFDPGATSTPGGEIPPHGGSGPGHFA   72 (122)
T ss_pred             CeEEEEEeCCHHHHHHHHHhccCCEEeec---CCCce--EEEEcCCC---cEEEEEecCCcccccCCCCCCCCCCccEEE
Confidence            46899999999999999999999998754   12222  33333232   223322211110      011234678999


Q ss_pred             EEec--chHHhHHHHHHHHHHhCCeeecCCccCCCCCceEEEEECCCCceEEEeec
Q 022818          228 ISTD--DVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDN  281 (291)
Q Consensus       228 ~~v~--di~~~~~~l~~~~~~~G~~~~~~~~~~~~~~~~~~~~~DpdG~~iel~~~  281 (291)
                      |.++  |++++++++    .++|+++...+. ... +++.+|++||+||+|||+++
T Consensus        73 ~~v~~~dl~~~~~~l----~~~g~~~~~~~~-~~~-~~~~~~~~DP~G~~ie~~~~  122 (122)
T cd08354          73 FAIPAEELAEWEAHL----EAKGVAIESEVQ-WPR-GGRSLYFRDPDGNLLELATP  122 (122)
T ss_pred             EEcCHHHHHHHHHHH----HhcCCceecccc-CCC-CeeEEEEECCCCCEEEEecC
Confidence            9984  788888888    999999876554 222 45889999999999999863

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd07261 Glo_EDI_BRP_like_11 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.57  E-value=8.7e-14  Score=100.96  Aligned_cols=108  Identities=24%  Similarity=0.306  Sum_probs=77.7

Q ss_pred             EEEEeCCHHHHHHHHHhhcCCEEEEEeecCCCceeEEEEecCCCCcceEEEeeecCCCCc-ccCCCCceEEEEEeCC---
Q 022818           27 AVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTS-YDIGTGFGHFAIATED---  102 (291)
Q Consensus        27 v~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~-~~~g~~~~~i~~~v~d---  102 (291)
                      +.|.|+|++++++||+++||+++....    ..  ...+..++ ..  .+.+........ .....+..|++|.|++   
T Consensus         2 ~~l~v~d~~~a~~FY~~~lg~~~~~~~----~~--~~~~~~~~-~~--~~~l~~~~~~~~~~~~~~~~~~~~~~v~~~~~   72 (114)
T cd07261           2 VLLYVEDPAASAEFYSELLGREPVELS----PT--FALFVLGS-GV--KLGLWSRHTVEPASDATGGGSELAFMVDDGAA   72 (114)
T ss_pred             EEEEECCHHHHHHHHHHHcCCCccCCC----Cc--eEEEEeCC-Cc--EEEEeeccccCCCCCCCCCceEEEEEcCCHHH
Confidence            679999999999999999999986532    11  23333322 22  233333322211 1123467899999975   


Q ss_pred             HHHHHHHHHHcCCeeecCCeecCCCceEEEEEECCCCCEEEEE
Q 022818          103 VYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELI  145 (291)
Q Consensus       103 ~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~Dp~G~~iel~  145 (291)
                      ++++++++.++|+++..+|...++|.  .++|+||+||+||++
T Consensus        73 ~~~~~~~~~~~g~~v~~~~~~~~~g~--~~~~~DPdGn~ie~~  113 (114)
T cd07261          73 VDALYAEWQAKGVKIIQEPTEMDFGY--TFVALDPDGHRLRVF  113 (114)
T ss_pred             HHHHHHHHHHCCCeEecCccccCCcc--EEEEECCCCCEEEee
Confidence            88999999999999998888777774  378999999999986

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd06587 Glo_EDI_BRP_like This domain superfamily is found in a variety of structurally related metalloproteins, including the type I extradiol dioxygenases, glyoxalase I and a group of antibiotic resistance proteins

Probab=99.57  E-value=3.9e-14  Score=101.58  Aligned_cols=112  Identities=29%  Similarity=0.373  Sum_probs=82.5

Q ss_pred             EEEeeeCChhhhHHHHHHhcCCeeeeeeccCCccceEEEeccccCCceeEEEEeeecCcceeecCcceeEEEEEecchHH
Q 022818          156 QVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDVYK  235 (291)
Q Consensus       156 ~v~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~hi~~~v~di~~  235 (291)
                      |+.+.|+|++++++||+++||+++........  .....+..+    ...+++....+......+.+..|++|.|+|+++
T Consensus         1 Hi~i~~~d~~~~~~fy~~~lg~~~~~~~~~~~--~~~~~~~~~----~~~i~l~~~~~~~~~~~~~~~~~~~~~v~~~~~   74 (112)
T cd06587           1 HVGLTVSDLEAAVAFYEEVLGFEVLFRNGNGG--AEFAVLGLG----GTRLELFEGDEPAPAPSGGGGVHLAFEVDDVDA   74 (112)
T ss_pred             CcceeeCCHHHHHHHHHhccCCEEEEeeccCC--EEEEEEecC----CceEEEecCCCCCCcccCCCeeEEEEECCCHHH
Confidence            78899999999999999999999876654211  234444422    355666554332211234678899999999999


Q ss_pred             hHHHHHHHHHHhCCeeecCCccCCCCCceEEEEECCCCceEEE
Q 022818          236 SAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVL  278 (291)
Q Consensus       236 ~~~~l~~~~~~~G~~~~~~~~~~~~~~~~~~~~~DpdG~~iel  278 (291)
                      +.++|    +++|+.+..++... ..+.+.+++.||+|+.|||
T Consensus        75 ~~~~l----~~~g~~~~~~~~~~-~~~~~~~~~~Dp~G~~~~~  112 (112)
T cd06587          75 AYERL----KAAGVEVLGEPREE-PWGGRVAYFRDPDGNLIEL  112 (112)
T ss_pred             HHHHH----HHcCCcccCCCcCC-CCCcEEEEEECCCCcEEeC
Confidence            99999    99999988777522 2346899999999999986

This domain superfamily is found in a variety of structurally related metalloproteins, including the type I extradiol dioxygenases, glyoxalase I and a group of antibiotic resistance proteins. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). Type I extradiol dioxygenases catalyze the incorporation of both atoms of molecular oxygen into aromatic substrates, which results in the cleavage of aromatic rings. They are key enzymes in the degradation of aromatic compounds. Type I extradiol dioxygenases include class I and class II enzymes. Class I and II enzymes show sequence similarity; the two-domain clas

>cd08350 BLMT_like BLMT, a bleomycin resistance protein encoded on the transposon Tn5, and similar proteins

Probab=99.57  E-value=1.2e-13  Score=101.19  Aligned_cols=108  Identities=22%  Similarity=0.224  Sum_probs=75.5

Q ss_pred             EEEEEeCCHHHHHHHHHhhcCCEEEEEeecCCCceeEEEEecCCCCcceEEEeeecCCCCcccCCCCceEEEEEeCCHHH
Q 022818           26 HAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIATEDVYK  105 (291)
Q Consensus        26 hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~~~~i~~~v~d~~~  105 (291)
                      ...|.|+|++++++||++ |||+...+.+.     ..+++..++    ..+.+.......   ......+++|.|+|+++
T Consensus         5 ~~~l~v~Dl~~s~~FY~~-lG~~~~~~~~~-----~~~~~~~~~----~~l~l~~~~~~~---~~~~~~~~~~~v~dvd~   71 (120)
T cd08350           5 IPNLPSRDLDATEAFYAR-LGFSVGYRQAA-----GYMILRRGD----LELHFFAHPDLD---PATSPFGCCLRLPDVAA   71 (120)
T ss_pred             cceeEcCCHHHHHHHHHH-cCCEEEecCCC-----CEEEEEcCC----EEEEEEecCcCC---CCCCcceEEEEeCCHHH
Confidence            467899999999999999 99998755331     133344332    233343322111   11234578999999999


Q ss_pred             HHHHHHHcCCeee-------cCCeecCCCceEEEEEECCCCCEEEEEeC
Q 022818          106 LVENIRAKGGNVT-------REPGPLKGGTTHIAFVKDPDGYIFELIQR  147 (291)
Q Consensus       106 ~~~~l~~~G~~~~-------~~~~~~~~g~~~~~~~~Dp~G~~iel~~~  147 (291)
                      ++++|+++|+++.       .++...++|.+. ++|+||+||+|+|.+.
T Consensus        72 ~~~~l~~~G~~~~~~~~~~~~~~~~~~~g~~~-~~~~DPdG~~ie~~~~  119 (120)
T cd08350          72 LHAEFRAAGLPETGSGIPRITPPEDQPWGMRE-FALVDPDGNLLRFGQP  119 (120)
T ss_pred             HHHHHHHhCccccccCCCcccCCcCCCCceeE-EEEECCCCCEEEeecC
Confidence            9999999999742       344444566654 8999999999999874

BLMT is a bleomycin (Bm) resistance protein, encoded by the ble gene on the transposon Tn5. This protein confers a survival advantage to Escherichia coli host cells. Bm is a glycopeptide antibiotic produced naturally by actinomycetes. It is a potent anti-cancer drug, which acts as a strong DNA-cutting agent, thereby causing cell death. BLMT has strong binding affinity to Bm and it protects against this lethal compound through drug sequestering. BLMT has two identically-folded subdomains, with the same alpha/beta fold; these two halves have no sequence similarity. BLMT is a dimer with two Bm-binding pockets formed at the dimer interface.

>cd06587 Glo_EDI_BRP_like This domain superfamily is found in a variety of structurally related metalloproteins, including the type I extradiol dioxygenases, glyoxalase I and a group of antibiotic resistance proteins

Probab=99.57  E-value=1.3e-13  Score=98.85  Aligned_cols=112  Identities=31%  Similarity=0.448  Sum_probs=81.5

Q ss_pred             EEEEEeCCHHHHHHHHHhhcCCEEEEEeecCCCceeEEEEecCCCCcceEEEeeecCCCCcccCCCCceEEEEEeCCHHH
Q 022818           26 HAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIATEDVYK  105 (291)
Q Consensus        26 hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~~~~i~~~v~d~~~  105 (291)
                      |+.|.|+|++++.+||+++||++.......  ......++..+    ...+.+...........+.+..|++|.|+|+++
T Consensus         1 Hi~i~~~d~~~~~~fy~~~lg~~~~~~~~~--~~~~~~~~~~~----~~~i~l~~~~~~~~~~~~~~~~~~~~~v~~~~~   74 (112)
T cd06587           1 HVGLTVSDLEAAVAFYEEVLGFEVLFRNGN--GGAEFAVLGLG----GTRLELFEGDEPAPAPSGGGGVHLAFEVDDVDA   74 (112)
T ss_pred             CcceeeCCHHHHHHHHHhccCCEEEEeecc--CCEEEEEEecC----CceEEEecCCCCCCcccCCCeeEEEEECCCHHH
Confidence            889999999999999999999998876542  11234445433    233444443322221345578899999999999


Q ss_pred             HHHHHHHcCCeeecCCeecCCCceEEEEEECCCCCEEEE
Q 022818          106 LVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFEL  144 (291)
Q Consensus       106 ~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~Dp~G~~iel  144 (291)
                      ++++|.++|+.+...+....++.. .+++.||+|+.|+|
T Consensus        75 ~~~~l~~~g~~~~~~~~~~~~~~~-~~~~~Dp~G~~~~~  112 (112)
T cd06587          75 AYERLKAAGVEVLGEPREEPWGGR-VAYFRDPDGNLIEL  112 (112)
T ss_pred             HHHHHHHcCCcccCCCcCCCCCcE-EEEEECCCCcEEeC
Confidence            999999999988877653334444 48999999999985

This domain superfamily is found in a variety of structurally related metalloproteins, including the type I extradiol dioxygenases, glyoxalase I and a group of antibiotic resistance proteins. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). Type I extradiol dioxygenases catalyze the incorporation of both atoms of molecular oxygen into aromatic substrates, which results in the cleavage of aromatic rings. They are key enzymes in the degradation of aromatic compounds. Type I extradiol dioxygenases include class I and class II enzymes. Class I and II enzymes show sequence similarity; the two-domain clas

>cd08344 MhqB_like_N N-terminal domain of MhqB, a type I extradiol dioxygenase, and similar proteins

Probab=99.57  E-value=8.5e-14  Score=100.73  Aligned_cols=106  Identities=21%  Similarity=0.212  Sum_probs=72.3

Q ss_pred             CceEEEeeeCChhhhHHHHHHhcCCeeeeeeccCCccceEEEeccccCCceeEEEEeeecCcceeecCcceeE--EEEEe
Q 022818          153 PLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQ--VAIST  230 (291)
Q Consensus       153 ~~~~v~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~h--i~~~v  230 (291)
                      +|.|+.|.|.|++++.+||+ +|||++....   +  ... +...+.  ....+.+...       ...+..|  +++.+
T Consensus         2 ~i~hv~l~v~d~~~s~~FY~-~lG~~~~~~~---~--~~~-~~~~~~--~~~~~~~~~~-------~~~~~~~~~~~~~~   65 (112)
T cd08344           2 SIDHFALEVPDLEVARRFYE-AFGLDVREEG---D--GLE-LRTAGN--DHRWARLLEG-------ARKRLAYLSFGIFE   65 (112)
T ss_pred             ceeEEEEecCCHHHHHHHHH-HhCCcEEeec---C--ceE-EEecCC--CceEEEeecC-------CCCceeeEEEEeEh
Confidence            68999999999999999997 6999986442   1  122 222111  2334444321       1123344  55556


Q ss_pred             cchHHhHHHHHHHHHHhCCeeecCCccCCCCCceEEEEECCCCceEEEeec
Q 022818          231 DDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDN  281 (291)
Q Consensus       231 ~di~~~~~~l~~~~~~~G~~~~~~~~~~~~~~~~~~~~~DpdG~~iel~~~  281 (291)
                      +|++++++++    +++|+++..++..  . +.+.+||+||+||+|||...
T Consensus        66 ~d~~~~~~~l----~~~Gi~~~~~~~~--~-~~~~~~~~DP~Gn~iel~~~  109 (112)
T cd08344          66 DDFAAFARHL----EAAGVALAAAPPG--A-DPDGVWFRDPDGNLLQVKVA  109 (112)
T ss_pred             hhHHHHHHHH----HHcCCceecCCCc--C-CCCEEEEECCCCCEEEEecC
Confidence            8899999999    9999998766522  2 24679999999999999854

This subfamily contains the N-terminal, non-catalytic, domain of Burkholderia sp. NF100 MhqB and similar proteins. MhqB is a type I extradiol dioxygenase involved in the catabolism of methylhydroquinone, an intermediate in the degradation of fenitrothion. The purified enzyme has shown extradiol ring cleavage activity toward 3-methylcatechol. Fe2+ was suggested as a cofactor, the same as most other enzymes in the family. Burkholderia sp. NF100 MhqB is encoded on the plasmid pNF1. The type I family of extradiol dioxygenases contains two structurally homologous barrel-shaped domains at the N- and C-terminal. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism.

>cd07254 Glo_EDI_BRP_like_20 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.57  E-value=1.1e-13  Score=101.45  Aligned_cols=112  Identities=21%  Similarity=0.261  Sum_probs=76.0

Q ss_pred             eEEEeeeCChhhhHHHHHHhcCCeeeeeeccCCccceEEEeccccCCceeEEEEeeecCcceeecCcceeEEEEEecc--
Q 022818          155 CQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDD--  232 (291)
Q Consensus       155 ~~v~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~hi~~~v~d--  232 (291)
                      .|+.|.|+|++++.+||+++||++.....+   . +..+...  ..  ...+.+......    ..++..|++|.|++  
T Consensus         3 ~hv~l~v~d~~~a~~FY~~~lG~~~~~~~~---~-~~~~~~~--~~--~~~~~~~~~~~~----~~~~~~h~~f~v~~~~   70 (120)
T cd07254           3 FHVALNVDDLEASIAFYSKLFGVEPTKVRD---D-YAKFLLE--DP--RLNFVLNERPGA----PGGGLNHLGVQVDSAE   70 (120)
T ss_pred             EEEEEEeCCHHHHHHHHHHHhCCeEecccC---C-eeEEEec--CC--ceEEEEecCCCC----CCCCeeEEEEEeCCHH
Confidence            589999999999999999999998754421   1 2222222  11  233333221111    11577899999988  


Q ss_pred             -hHHhHHHHHHHHHHhCCeeecCCccCCC-CCceEEEEECCCCceEEEeech
Q 022818          233 -VYKSAEVVNLVTQELGGKITRQPGSIPG-LNTKITSFVDPDGWKTVLVDNE  282 (291)
Q Consensus       233 -i~~~~~~l~~~~~~~G~~~~~~~~~~~~-~~~~~~~~~DpdG~~iel~~~~  282 (291)
                       +++.++++    .++|+++..+|..... ...+.+|++||+||+|||++..
T Consensus        71 dl~~~~~~l----~~~G~~~~~~~~~~~~~~~~~~~~~~DP~G~~ie~~~~~  118 (120)
T cd07254          71 EVAEAKARA----EAAGLPTFKEEDTTCCYAVQDKVWVTDPDGNAWEVFVTL  118 (120)
T ss_pred             HHHHHHHHH----HHcCCeEEccCCcccccCCcceEEEECCCCCEEEEEEee
Confidence             55566666    9999998877654332 2247899999999999999753

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and types I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>cd08344 MhqB_like_N N-terminal domain of MhqB, a type I extradiol dioxygenase, and similar proteins

Probab=99.57  E-value=1.2e-13  Score=100.00  Aligned_cols=108  Identities=19%  Similarity=0.345  Sum_probs=72.9

Q ss_pred             eeeEEEEEEeCCHHHHHHHHHhhcCCEEEEEeecCCCceeEEEEecCCCCcceEEEeeecCCCCcccCCCCceE--EEEE
Q 022818           22 RRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGH--FAIA   99 (291)
Q Consensus        22 ~~i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~~~~--i~~~   99 (291)
                      ++|+||.|.|+|++++.+||+ .|||++..+.   +   ...++..+..  ...+.+....       ..+..|  +.+.
T Consensus         1 ~~i~hv~l~v~d~~~s~~FY~-~lG~~~~~~~---~---~~~~~~~~~~--~~~~~~~~~~-------~~~~~~~~~~~~   64 (112)
T cd08344           1 HSIDHFALEVPDLEVARRFYE-AFGLDVREEG---D---GLELRTAGND--HRWARLLEGA-------RKRLAYLSFGIF   64 (112)
T ss_pred             CceeEEEEecCCHHHHHHHHH-HhCCcEEeec---C---ceEEEecCCC--ceEEEeecCC-------CCceeeEEEEeE
Confidence            468999999999999999998 6999986542   1   1222222222  2222222211       123444  4455


Q ss_pred             eCCHHHHHHHHHHcCCeeecCCeecCCCceEEEEEECCCCCEEEEEeCC
Q 022818          100 TEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRG  148 (291)
Q Consensus       100 v~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~Dp~G~~iel~~~~  148 (291)
                      ++|+++++++|+++|+++...+  .+++... ++|.||+||+|||....
T Consensus        65 ~~d~~~~~~~l~~~Gi~~~~~~--~~~~~~~-~~~~DP~Gn~iel~~~~  110 (112)
T cd08344          65 EDDFAAFARHLEAAGVALAAAP--PGADPDG-VWFRDPDGNLLQVKVAE  110 (112)
T ss_pred             hhhHHHHHHHHHHcCCceecCC--CcCCCCE-EEEECCCCCEEEEecCC
Confidence            6899999999999999987654  3333333 89999999999998643

This subfamily contains the N-terminal, non-catalytic, domain of Burkholderia sp. NF100 MhqB and similar proteins. MhqB is a type I extradiol dioxygenase involved in the catabolism of methylhydroquinone, an intermediate in the degradation of fenitrothion. The purified enzyme has shown extradiol ring cleavage activity toward 3-methylcatechol. Fe2+ was suggested as a cofactor, the same as most other enzymes in the family. Burkholderia sp. NF100 MhqB is encoded on the plasmid pNF1. The type I family of extradiol dioxygenases contains two structurally homologous barrel-shaped domains at the N- and C-terminal. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism.

>COG3324 Predicted enzyme related to lactoylglutathione lyase [General function prediction only]

Probab=99.56  E-value=2.7e-13  Score=97.52  Aligned_cols=122  Identities=25%  Similarity=0.287  Sum_probs=89.1

Q ss_pred             CcceeeEEEEEEeCCHHHHHHHHHhhcCCEEEEEeecCCCceeEEEEecCCCCcceEEEeeecCCCCcccCCCCceEEEE
Q 022818           19 KDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAI   98 (291)
Q Consensus        19 ~~~~~i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~~~~i~~   98 (291)
                      .+...+.|..|.|+|++++++||.++|||+........+  .....+..+.....-.+.-  .   .....+.+...+.|
T Consensus         5 ~~~~~i~w~Ei~~~D~~ra~~FY~~vFgW~~~~~~~~~~--~~y~~f~~~~~~~gG~l~~--~---~~~~p~~~~~~iy~   77 (127)
T COG3324           5 GEKGTIVWFELPVSDLERAKAFYEKVFGWTFEDYFDMGE--MRYAVFPADGAGAGGGLMA--R---PGSPPGGGGWVIYF   77 (127)
T ss_pred             ccCCccEEEeeecCCHHHHHHHHHHhhCceecccccCCC--ceEEEEECCCccccceecc--C---CcCCCCCCCEEEEE
Confidence            457788999999999999999999999999977644322  2334443322111111111  0   01112246678889


Q ss_pred             EeCCHHHHHHHHHHcCCeeecCCeecCCCceEEEEEECCCCCEEEEEeCC
Q 022818           99 ATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRG  148 (291)
Q Consensus        99 ~v~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~Dp~G~~iel~~~~  148 (291)
                      .|+|+++..+|.+++|.+++.++.+.+++.+. +.+.||+||+|.|++..
T Consensus        78 ~v~did~~l~rv~~~GG~V~~p~~~~p~~G~~-a~~~Dp~Gn~~~l~s~~  126 (127)
T COG3324          78 AVDDIDATLERVVAAGGKVLRPKTEFPGGGRI-AHFVDPEGNRFGLWSPA  126 (127)
T ss_pred             ecCChHHHHHHHHhcCCeEEecccccCCceEE-EEEECCCCCEEEEeecC
Confidence            99999999999999999999999999975554 88999999999998753

>cd08357 Glo_EDI_BRP_like_18 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.56  E-value=8.4e-14  Score=102.67  Aligned_cols=113  Identities=26%  Similarity=0.358  Sum_probs=73.4

Q ss_pred             EEEEEeCCHHHHHHHHHhhcCCEEEEEeecCCCceeEEEEecCCCCcceEEEeeecCC---CCcc--cCCCCceEEE--E
Q 022818           26 HAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYG---VTSY--DIGTGFGHFA--I   98 (291)
Q Consensus        26 hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~---~~~~--~~g~~~~~i~--~   98 (291)
                      ||.|.|+|++++++||+++||+++.....      ....+..++  ..+.+.+.....   ....  ....+..|++  +
T Consensus         2 Hi~l~v~Dl~~s~~FY~~~lG~~~~~~~~------~~~~~~~~~--~~~~l~~~~~~~~~~~~~~~~~~~~~~~h~~~~~   73 (125)
T cd08357           2 HLAIPVRDLEAARAFYGDVLGCKEGRSSE------TWVDFDFFG--HQLVAHLSPNFNADASDNAVDGHPVPVPHFGLIL   73 (125)
T ss_pred             eEEEEeCCHHHHHHHHHHhcCCEEeeccC------CcccccccC--cEEEEEeccCCCcccccCCCCCCccCCceEEEEE
Confidence            99999999999999999999999864321      112232222  123333222110   0000  1112345654  5


Q ss_pred             EeCCHHHHHHHHHHcCCeeecCCeecCC---CceEEEEEECCCCCEEEEEe
Q 022818           99 ATEDVYKLVENIRAKGGNVTREPGPLKG---GTTHIAFVKDPDGYIFELIQ  146 (291)
Q Consensus        99 ~v~d~~~~~~~l~~~G~~~~~~~~~~~~---g~~~~~~~~Dp~G~~iel~~  146 (291)
                      .++|+++++++|+++|+++..+|.....   +..+.++++|||||+|||..
T Consensus        74 ~~~dv~~~~~~l~~~g~~~~~~p~~~~~~~~~~~~~~~~~DPdG~~iE~~~  124 (125)
T cd08357          74 SEEEFDALAERLEAAGVEFLIEPYTRFEGQPGEQETFFLKDPSGNALEFKA  124 (125)
T ss_pred             eHHHHHHHHHHHHHCCCcEecCcceeccCCcCceeEEEEECCCCCEEEEee
Confidence            6789999999999999998876654321   22345899999999999974

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>cd09012 Glo_EDI_BRP_like_24 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.56  E-value=9.8e-14  Score=102.32  Aligned_cols=112  Identities=21%  Similarity=0.213  Sum_probs=76.0

Q ss_pred             EEEEEEeCCHHHHHHHHHhhcCCEEEEEeecCCCceeEEEEecCCCCcceEEEeeecCC-----CCcc--cCCCCceEEE
Q 022818           25 LHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYG-----VTSY--DIGTGFGHFA   97 (291)
Q Consensus        25 ~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-----~~~~--~~g~~~~~i~   97 (291)
                      .++.|.|+|++++++||++ |||+.........    ...+..++ ..  .+.+.....     ....  ..+.+..|++
T Consensus         2 ~~v~l~V~Dl~~s~~FY~~-lGf~~~~~~~~~~----~~~~~~~~-~~--~l~l~~~~~~~~~~~~~~~~~~~~~~~~l~   73 (124)
T cd09012           2 IFINLPVKDLEKSTAFYTA-LGFEFNPQFSDEK----AACMVISD-NI--FVMLLTEDFFQTFTPKPIADTKKSTEVLIS   73 (124)
T ss_pred             EEEEeecCCHHHHHHHHHH-CCCEEccccCCCC----eEEEEECC-ce--EEEEEcHHHHhhccCCCcccCCCCCeEEEE
Confidence            5899999999999999987 9999864332222    12233332 12  232322110     0000  1233457999


Q ss_pred             EEeC---CHHHHHHHHHHcCCeeecCCeecCCCceEEEEEECCCCCEEEEEe
Q 022818           98 IATE---DVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQ  146 (291)
Q Consensus        98 ~~v~---d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~Dp~G~~iel~~  146 (291)
                      |.|+   ++++++++++++|+++..+|...+++ + .+||+|||||+||++.
T Consensus        74 f~v~~~~~vd~~~~~l~~~G~~i~~~p~~~~~~-~-~~~~~DPdG~~ie~~~  123 (124)
T cd09012          74 LSADSREEVDELVEKALAAGGKEFREPQDHGFM-Y-GRSFADLDGHLWEVLW  123 (124)
T ss_pred             EeCCCHHHHHHHHHHHHHCCCcccCCcccCCce-E-EEEEECCCCCEEEEEE
Confidence            9997   58899999999999998887776653 3 3799999999999985

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>TIGR03213 23dbph12diox 2,3-dihydroxybiphenyl 1,2-dioxygenase

Probab=99.55  E-value=1.6e-13  Score=116.06  Aligned_cols=118  Identities=22%  Similarity=0.359  Sum_probs=83.0

Q ss_pred             ceeeEEEEEEeCCHHHHHHHHHhhcCCEEEEEeecCC--C-ceeEEEEecCCCCcceEEEeeecCCCCcccCCCCceEEE
Q 022818           21 KRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPE--E-KYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFA   97 (291)
Q Consensus        21 ~~~i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~--~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~~~~i~   97 (291)
                      ..+|+||.|.|+|++++.+||+++|||++..+...+.  + .+...++..++.  +..+.+....      ...+++|++
T Consensus       140 ~~~l~Hv~l~v~Dle~s~~FY~~~LGf~~~~~~~~~~~~g~~~~~~~l~~~~~--~~~~~l~~~~------~~~~~~Hia  211 (286)
T TIGR03213       140 DQGLGHIVLRVPDVDAALAFYTEVLGFQLSDVIDLPAGPGVTVRPYFLHCNER--HHSLAFAAGP------SEKRLNHLM  211 (286)
T ss_pred             CccccEEEEEcCCHHHHHHHHHHccCCeEEEeEcccCCCCCcceEEEEEECCC--cceEEEecCC------CCCceEEEE
Confidence            6799999999999999999999999999876532221  1 123455655432  2222222111      234789999


Q ss_pred             EEeCCHHH---HHHHHHHcCCeeecCCeecCCCceEEEEEECCCCCEEEEEeC
Q 022818           98 IATEDVYK---LVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQR  147 (291)
Q Consensus        98 ~~v~d~~~---~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~Dp~G~~iel~~~  147 (291)
                      |.|+|.++   +.++|+++|+ ....+.....+...++|++||+|++||+...
T Consensus       212 f~v~d~~~v~~~~~~l~~~G~-~~~~~~r~~~~~~~~~y~~DP~G~~iE~~~~  263 (286)
T TIGR03213       212 LEVDTLDDVGLALDRVDADGI-VASTLGRHTNDHMVSFYVATPSGWLVEYGWG  263 (286)
T ss_pred             EEcCCHHHHHHHHHHHHHCCC-EEecCCcCCCCCeEEEEEECCCCcEEEeecC
Confidence            99988666   8999999999 4444444443445568999999999999864

Members of this protein family all have activity as 2,3-dihydroxybiphenyl 1,2-dioxygenase, the third enzyme of a pathway for biphenyl degradation. Many of the extradiol ring-cleaving dioxygenases, to which these proteins belong, act on a range of related substrates. Note that some members of this family may be found operons for toluene or naphthalene degradation, where other activities of the same enzyme may be more significant; the trusted cutoff for this model is set relatively high to exclude most such instances.

>PF13669 Glyoxalase_4: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily; PDB: 3RMU_B 3ISQ_A 1JC5_D 1JC4_D 3HDP_A 2QH0_A 3GM5_A 3OA4_A 3CT8_A

Probab=99.55  E-value=1e-13  Score=99.69  Aligned_cols=95  Identities=25%  Similarity=0.304  Sum_probs=75.8

Q ss_pred             EEEEEEeCCHHHHHHHHHhhcCCEEEEEeecCCCceeEEEEecCCCCcceEEEeeecCCCCcc--cCCCCceEEEEEeCC
Q 022818           25 LHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSY--DIGTGFGHFAIATED  102 (291)
Q Consensus        25 ~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~--~~g~~~~~i~~~v~d  102 (291)
                      +||+|.|+|++++++||+++||++.......+....+..++..++..  ..+++.++......  ..+.|++||||.|+|
T Consensus         1 dHv~i~V~Dl~~a~~~~~~~lG~~~~~~~~~~~~~v~~~~~~~~~~~--~~iELi~p~~~~~~~~~~~~gi~Hia~~v~D   78 (109)
T PF13669_consen    1 DHVGIVVPDLDAAAAFYCDVLGFEPWERYRDEPQGVRVAFLYLGDGP--VQIELIQPLDGDSPLDRGGGGIHHIAFEVDD   78 (109)
T ss_dssp             EEEEEEES-HHHHHHHHHHCTTHEEEEEEEEGCTTEEEEEEEETTET--EEEEEEEESSTTCHHHHTSSEEEEEEEEESH
T ss_pred             CEEEEEcCCHHHHHHHHHHhhCCcEEEEEecCCCCEEEEEEEeCCCc--EEEEEEEeCCCCcccccCCCCEEEEEEEeCC
Confidence            69999999999999999999999988776666666777777765432  55677765544332  267899999999999


Q ss_pred             HHHHHHHHHHcCCeeecCC
Q 022818          103 VYKLVENIRAKGGNVTREP  121 (291)
Q Consensus       103 ~~~~~~~l~~~G~~~~~~~  121 (291)
                      ++++.++|+++|+++...+
T Consensus        79 ~d~~~~~l~~~G~~~~~~~   97 (109)
T PF13669_consen   79 LDAAIARLEAQGFRVLDEG   97 (109)
T ss_dssp             HHHHHHHHHHTTECEEECE
T ss_pred             HHHHHHHHHHCCCEEcccC
Confidence            9999999999999977654

>cd08356 Glo_EDI_BRP_like_17 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.54  E-value=1.4e-13  Score=99.69  Aligned_cols=104  Identities=21%  Similarity=0.220  Sum_probs=72.4

Q ss_pred             EEeeeCChhhhHHHHHHhcCCeeeeeeccCCccceEEEeccccCCceeEEEEeeecCcceeecCcceeEEEEEecchHHh
Q 022818          157 VMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDVYKS  236 (291)
Q Consensus       157 v~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~hi~~~v~di~~~  236 (291)
                      ..|.|+|++++++||++ |||++....+      ...++..+    ...+.+......    ...+..+++|.|+|++++
T Consensus         5 ~~l~v~Dl~~s~~FY~~-LGf~~~~~~~------~~~~l~~~----~~~l~l~~~~~~----~~~~~~~~~~~v~did~~   69 (113)
T cd08356           5 PFIPAKDFAESKQFYQA-LGFELEWEND------NLAYFRLG----NCAFYLQDYYVK----DWAENSMLHLEVDDLEAY   69 (113)
T ss_pred             eccccccHHHHHHHHHH-hCCeeEecCC------CEEEEEcC----CEEEEeecCCCc----ccccCCEEEEEECCHHHH
Confidence            46889999999999987 9999876531      22334432    233334221111    112346899999999999


Q ss_pred             HHHHHHHHHHhCCeee-----cCCccCCCCCceEEEEECCCCceEEEee
Q 022818          237 AEVVNLVTQELGGKIT-----RQPGSIPGLNTKITSFVDPDGWKTVLVD  280 (291)
Q Consensus       237 ~~~l~~~~~~~G~~~~-----~~~~~~~~~~~~~~~~~DpdG~~iel~~  280 (291)
                      +++|    +++|+++.     .+|...++ +.+.++|+|||||+|+|.+
T Consensus        70 ~~~l----~~~G~~~~~~~~~~~~~~~~~-g~r~f~~~DPdGn~~~~~~  113 (113)
T cd08356          70 YEHI----KALGLPKKFPGVKLPPITQPW-WGREFFLHDPSGVLWHIGQ  113 (113)
T ss_pred             HHHH----HHcCCcccccceecCccccCC-CcEEEEEECCCccEEEeeC
Confidence            9999    99998743     23344444 4699999999999999975

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd07251 Glo_EDI_BRP_like_10 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.52  E-value=2.5e-13  Score=99.48  Aligned_cols=110  Identities=25%  Similarity=0.250  Sum_probs=74.9

Q ss_pred             EEeeeCChhhhHHHHHHhcCCeeeeeeccCCccceEEEeccccCCceeEEEEeeecCc------ceeecCcceeEEEEEe
Q 022818          157 VMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGV------TEYTKGNAYAQVAIST  230 (291)
Q Consensus       157 v~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~------~~~~~~~~~~hi~~~v  230 (291)
                      |+|.|.|++++.+||+++|||++...   .+..+  .++..+    +..+.+......      .....+.+..|++|.+
T Consensus         2 i~l~v~d~~~a~~FY~~~lg~~~~~~---~~~~~--~~~~~~----~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~   72 (121)
T cd07251           2 ITLGVADLARSRAFYEALLGWKPSAD---SNDGV--AFFQLG----GLVLALFPREELAKDAGVPVPPPGFSGITLAHNV   72 (121)
T ss_pred             eeEeeCCHHHHHHHHHHhcCceeccc---CCCce--EEEEcC----CeEEEEecchhhhhhcCCCCCCCCccceEEEEEc
Confidence            68999999999999999999997655   11222  233321    244554332110      0111222344566665


Q ss_pred             ---cchHHhHHHHHHHHHHhCCeeecCCccCCCCCceEEEEECCCCceEEEee
Q 022818          231 ---DDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVD  280 (291)
Q Consensus       231 ---~di~~~~~~l~~~~~~~G~~~~~~~~~~~~~~~~~~~~~DpdG~~iel~~  280 (291)
                         +|++++++++    +++|+++..+|...++ +++.+|++||+||+|||..
T Consensus        73 ~~~~d~~~~~~~l----~~~G~~~~~~~~~~~~-g~~~~~~~DP~Gn~iei~~  120 (121)
T cd07251          73 RSEEEVDAVLARA----AAAGATIVKPPQDVFW-GGYSGYFADPDGHLWEVAH  120 (121)
T ss_pred             CCHHHHHHHHHHH----HhCCCEEecCCccCCC-CceEEEEECCCCCEEEEee
Confidence               5788888888    9999999888876665 4688999999999999975

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd08356 Glo_EDI_BRP_like_17 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.51  E-value=2.1e-13  Score=98.77  Aligned_cols=104  Identities=20%  Similarity=0.297  Sum_probs=72.3

Q ss_pred             EEEEeCCHHHHHHHHHhhcCCEEEEEeecCCCceeEEEEecCCCCcceEEEeeecCCCCcccCCCCceEEEEEeCCHHHH
Q 022818           27 AVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIATEDVYKL  106 (291)
Q Consensus        27 v~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~~~~i~~~v~d~~~~  106 (291)
                      ..|.|+|++++++||++ |||++....+      ...++..++  ..+.+  .......    .....+++|.|+|++++
T Consensus         5 ~~l~v~Dl~~s~~FY~~-LGf~~~~~~~------~~~~l~~~~--~~l~l--~~~~~~~----~~~~~~~~~~v~did~~   69 (113)
T cd08356           5 PFIPAKDFAESKQFYQA-LGFELEWEND------NLAYFRLGN--CAFYL--QDYYVKD----WAENSMLHLEVDDLEAY   69 (113)
T ss_pred             eccccccHHHHHHHHHH-hCCeeEecCC------CEEEEEcCC--EEEEe--ecCCCcc----cccCCEEEEEECCHHHH
Confidence            46889999999999988 9999976532      234555442  22323  2211111    11335789999999999


Q ss_pred             HHHHHHcCCeee-----cCCeecCCCceEEEEEECCCCCEEEEEe
Q 022818          107 VENIRAKGGNVT-----REPGPLKGGTTHIAFVKDPDGYIFELIQ  146 (291)
Q Consensus       107 ~~~l~~~G~~~~-----~~~~~~~~g~~~~~~~~Dp~G~~iel~~  146 (291)
                      +++|+++|+++.     .++...++|.+. ++|+|||||+|+|.+
T Consensus        70 ~~~l~~~G~~~~~~~~~~~~~~~~~g~r~-f~~~DPdGn~~~~~~  113 (113)
T cd08356          70 YEHIKALGLPKKFPGVKLPPITQPWWGRE-FFLHDPSGVLWHIGQ  113 (113)
T ss_pred             HHHHHHcCCcccccceecCccccCCCcEE-EEEECCCccEEEeeC
Confidence            999999998643     234445666654 999999999999864

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>PF13669 Glyoxalase_4: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily; PDB: 3RMU_B 3ISQ_A 1JC5_D 1JC4_D 3HDP_A 2QH0_A 3GM5_A 3OA4_A 3CT8_A

Probab=99.51  E-value=1.6e-13  Score=98.72  Aligned_cols=95  Identities=18%  Similarity=0.213  Sum_probs=76.4

Q ss_pred             eEEEeeeCChhhhHHHHHHhcCCeeeeeeccCCccceEEEeccccCCceeEEEEeeecCcce--eecCcceeEEEEEecc
Q 022818          155 CQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTE--YTKGNAYAQVAISTDD  232 (291)
Q Consensus       155 ~~v~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~--~~~~~~~~hi~~~v~d  232 (291)
                      +||++.|+|++++++||+++||+.+......+..+.+..++..+++  ...+||+++.+..+  ...+.|++||||.|+|
T Consensus         1 dHv~i~V~Dl~~a~~~~~~~lG~~~~~~~~~~~~~v~~~~~~~~~~--~~~iELi~p~~~~~~~~~~~~gi~Hia~~v~D   78 (109)
T PF13669_consen    1 DHVGIVVPDLDAAAAFYCDVLGFEPWERYRDEPQGVRVAFLYLGDG--PVQIELIQPLDGDSPLDRGGGGIHHIAFEVDD   78 (109)
T ss_dssp             EEEEEEES-HHHHHHHHHHCTTHEEEEEEEEGCTTEEEEEEEETTE--TEEEEEEEESSTTCHHHHTSSEEEEEEEEESH
T ss_pred             CEEEEEcCCHHHHHHHHHHhhCCcEEEEEecCCCCEEEEEEEeCCC--cEEEEEEEeCCCCcccccCCCCEEEEEEEeCC
Confidence            5999999999999999999999998777666666666666664432  26889888766543  2377899999999999


Q ss_pred             hHHhHHHHHHHHHHhCCeeecCC
Q 022818          233 VYKSAEVVNLVTQELGGKITRQP  255 (291)
Q Consensus       233 i~~~~~~l~~~~~~~G~~~~~~~  255 (291)
                      ++++.++|    +++|++++..+
T Consensus        79 ~d~~~~~l----~~~G~~~~~~~   97 (109)
T PF13669_consen   79 LDAAIARL----EAQGFRVLDEG   97 (109)
T ss_dssp             HHHHHHHH----HHTTECEEECE
T ss_pred             HHHHHHHH----HHCCCEEcccC
Confidence            99999999    99999987665

>cd07251 Glo_EDI_BRP_like_10 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.49  E-value=6.4e-13  Score=97.27  Aligned_cols=110  Identities=25%  Similarity=0.348  Sum_probs=75.3

Q ss_pred             EEEEeCCHHHHHHHHHhhcCCEEEEEeecCCCceeEEEEecCCCCcceEEEeeecCC------CCcccCCCCceEEEEEe
Q 022818           27 AVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYG------VTSYDIGTGFGHFAIAT  100 (291)
Q Consensus        27 v~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~------~~~~~~g~~~~~i~~~v  100 (291)
                      |.|.|+|++++.+||+++|||++..+.   ..  ...++..++    ..+.+.....      ......+.+..++++.+
T Consensus         2 i~l~v~d~~~a~~FY~~~lg~~~~~~~---~~--~~~~~~~~~----~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~   72 (121)
T cd07251           2 ITLGVADLARSRAFYEALLGWKPSADS---ND--GVAFFQLGG----LVLALFPREELAKDAGVPVPPPGFSGITLAHNV   72 (121)
T ss_pred             eeEeeCCHHHHHHHHHHhcCceecccC---CC--ceEEEEcCC----eEEEEecchhhhhhcCCCCCCCCccceEEEEEc
Confidence            689999999999999999999986551   11  233444432    2233332111      01111222344566554


Q ss_pred             ---CCHHHHHHHHHHcCCeeecCCeecCCCceEEEEEECCCCCEEEEEe
Q 022818          101 ---EDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQ  146 (291)
Q Consensus       101 ---~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~Dp~G~~iel~~  146 (291)
                         +|++++++++++.|+++..++...++|... ++++||+||+||+..
T Consensus        73 ~~~~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~-~~~~DP~Gn~iei~~  120 (121)
T cd07251          73 RSEEEVDAVLARAAAAGATIVKPPQDVFWGGYS-GYFADPDGHLWEVAH  120 (121)
T ss_pred             CCHHHHHHHHHHHHhCCCEEecCCccCCCCceE-EEEECCCCCEEEEee
Confidence               689999999999999998887777776554 899999999999975

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>KOG2944 consensus Glyoxalase [Carbohydrate transport and metabolism]

Probab=99.44  E-value=9.9e-13  Score=95.85  Aligned_cols=125  Identities=35%  Similarity=0.515  Sum_probs=79.9

Q ss_pred             ceeeEEEEEEeCCHHHHHHHHHhhcCCEEEEEeecCCCceeEEEEecCC---------C------CcceEEEeeecCCCC
Q 022818           21 KRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGP---------E------QSHFVVELTYNYGVT   85 (291)
Q Consensus        21 ~~~i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~---------~------~~~~~l~~~~~~~~~   85 (291)
                      --.+.|..+.+.|+.++..||++++|+.+..+..+++-.+...+++...         .      ...-.+++..+.+..
T Consensus        20 t~~~~~t~~rvkd~~~Sl~fytr~~gm~l~~~~~fke~~Fsl~fL~~~~~~~vP~~~~~~~v~~~~~~~~~ELthn~Gte   99 (170)
T KOG2944|consen   20 TYLLQQTMLRVKDPTGSLKFYTRVNGMALLVPDDFKEAKFSLYFLGAEVSEDVPKPEHGVSVFVFSRNAKLELTHNWGTE   99 (170)
T ss_pred             hhhhhhceeecccchhhhhhhhhhccceeechhhhhHhhhHHHhhcccccccCccCCCCCceEEecccCceeeecCCCCC
Confidence            3445778888888888888888888887765544433222222221100         0      001134555554432


Q ss_pred             c-----cc----CCCCceEEEEEeCCHHHHHHHHHHcCCeeecCCeecCCCceEEEEEECCCCCEEEEEeC
Q 022818           86 S-----YD----IGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQR  147 (291)
Q Consensus        86 ~-----~~----~g~~~~~i~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~Dp~G~~iel~~~  147 (291)
                      +     +.    .+.|.+||||.|+|++++.++|++.|+++...+.+...  ...+++.||||+.||+...
T Consensus       100 s~~~~~~~ngN~~prGfgHIci~V~di~sac~~lkekGV~f~Kk~~dGk~--K~iaF~~dpDgywiei~~~  168 (170)
T KOG2944|consen  100 SPPDQAYLNGNKEPRGFGHICIEVDDINSACERLKEKGVRFKKKLKDGKM--KPIAFLHDPDGYWIEIELE  168 (170)
T ss_pred             CCcchhhcCCCCCCCccceEEEEeCCHHHHHHHHHHhCceeeecCCCccc--cceeEEECCCCCeEEEeec
Confidence            1     22    12389999999999999999999999997665444333  1358899999999998754

>KOG2944 consensus Glyoxalase [Carbohydrate transport and metabolism]

Probab=99.41  E-value=3e-12  Score=93.38  Aligned_cols=119  Identities=25%  Similarity=0.357  Sum_probs=78.6

Q ss_pred             CceEEEeeeCChhhhHHHHHHhcCCeeeeeeccCCccceEEEeccccCCceeEEEEeeecCcce-----eecC----cce
Q 022818          153 PLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTE-----YTKG----NAY  223 (291)
Q Consensus       153 ~~~~v~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~-----~~~~----~~~  223 (291)
                      ++.++.+.+++.-+...||...||+++.+..+.+......+...     ....+|+..+++...     +..+    .|.
T Consensus        42 r~~gm~l~~~~~fke~~Fsl~fL~~~~~~~vP~~~~~~~v~~~~-----~~~~~ELthn~Gtes~~~~~~~ngN~~prGf  116 (170)
T KOG2944|consen   42 RVNGMALLVPDDFKEAKFSLYFLGAEVSEDVPKPEHGVSVFVFS-----RNAKLELTHNWGTESPPDQAYLNGNKEPRGF  116 (170)
T ss_pred             hhccceeechhhhhHhhhHHHhhcccccccCccCCCCCceEEec-----ccCceeeecCCCCCCCcchhhcCCCCCCCcc
Confidence            45555666666666666666666665544444333222222222     145678877765542     2222    288


Q ss_pred             eEEEEEecchHHhHHHHHHHHHHhCCeeecCCccCCCCCceEEEEECCCCceEEEeech
Q 022818          224 AQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNE  282 (291)
Q Consensus       224 ~hi~~~v~di~~~~~~l~~~~~~~G~~~~~~~~~~~~~~~~~~~~~DpdG~~iel~~~~  282 (291)
                      .||||.|+||+++.++|    ++.|+++...|....-  -..+|+.||||++|||..+.
T Consensus       117 gHIci~V~di~sac~~l----kekGV~f~Kk~~dGk~--K~iaF~~dpDgywiei~~~s  169 (170)
T KOG2944|consen  117 GHICIEVDDINSACERL----KEKGVRFKKKLKDGKM--KPIAFLHDPDGYWIEIELES  169 (170)
T ss_pred             ceEEEEeCCHHHHHHHH----HHhCceeeecCCCccc--cceeEEECCCCCeEEEeecC
Confidence            99999999999999999    9999998776665211  25799999999999998653

>COG2514 Predicted ring-cleavage extradiol dioxygenase [General function prediction only]

Probab=99.38  E-value=9.1e-12  Score=99.63  Aligned_cols=122  Identities=21%  Similarity=0.226  Sum_probs=88.1

Q ss_pred             CCCCCceEEEeeeCChhhhHHHHHHhcCCeeeeeeccCCccceEEEeccccCCceeEEEEeeecCcc-eeecCcceeEEE
Q 022818          149 PTPEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVT-EYTKGNAYAQVA  227 (291)
Q Consensus       149 ~~~~~~~~v~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~-~~~~~~~~~hi~  227 (291)
                      ..+..+..|+|.|+|++++..||+++||+++..+.+      +.+.++.++   ...+.|.+...+. +.+...|..|+|
T Consensus         6 ~~~~~v~~v~L~vrdL~~~~~FY~~ilGL~v~~~~~------~~v~L~vgg---~~LL~L~q~~~a~~~~~~~aGLyH~A   76 (265)
T COG2514           6 TTPTFVGAVTLNVRDLDSMTSFYQEILGLQVLEETD------GSVTLGVGG---TPLLTLEQFPDARRPPPRAAGLYHTA   76 (265)
T ss_pred             CCCcEEEEEEEEeccHHHHHHHHHHhhCCeeeeccC------ceEEEeeCC---EEEEEEEeCCCCCCCCccccceeeee
Confidence            345678899999999999999999999999887654      333344333   2455565544332 224567999999


Q ss_pred             EEecchHHhHHHHHHHHHHhCCeeecCCccCCCCCceEEEEECCCCceEEEeechh
Q 022818          228 ISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNED  283 (291)
Q Consensus       228 ~~v~di~~~~~~l~~~~~~~G~~~~~~~~~~~~~~~~~~~~~DpdG~~iel~~~~~  283 (291)
                      |.+++..++.+.| .++.+.|+.+. +..++..  ...+||.||+||-||+....+
T Consensus        77 fLlP~r~~L~~~l-~hl~~~~~~l~-Ga~DH~v--SEAlYl~DPEGNGIEiYaDrp  128 (265)
T COG2514          77 FLLPTREDLARVL-NHLAEEGIPLV-GASDHLV--SEALYLEDPEGNGIEIYADRP  128 (265)
T ss_pred             eecCCHHHHHHHH-HHHHhcCCccc-ccCcchh--heeeeecCCCCCeEEEEecCC
Confidence            9999855544444 55588998875 4455444  478999999999999997744

>cd07250 HPPD_C_like C-terminal domain of 4-hydroxyphenylpyruvate dioxygenase (HppD) and hydroxymandelate Synthase (HmaS)

Probab=99.31  E-value=2.7e-11  Score=95.84  Aligned_cols=100  Identities=24%  Similarity=0.384  Sum_probs=73.5

Q ss_pred             ceeeEEEEEEeC--CHHHHHHHHHhhcCCEEEEEeecCC--CceeEEEEecCCCCcceEEEeeecCCC---C---c---c
Q 022818           21 KRRFLHAVYRVG--DLDRTIKFYTECFGMKLLRKRDVPE--EKYSNAFLGFGPEQSHFVVELTYNYGV---T---S---Y   87 (291)
Q Consensus        21 ~~~i~hv~l~v~--d~~~~~~FY~~~lG~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~l~~~~~~~~---~---~---~   87 (291)
                      +.+|+||++.|+  |++++++||+++|||+.......++  .......+..++  ..+.+++..+...   +   .   .
T Consensus         1 ~~~iDHv~i~V~~~dl~~a~~fY~~~LGf~~~~~~~~~~~~~~~~s~~l~~~~--g~i~l~L~~~~~~~~~s~~~~fl~~   78 (191)
T cd07250           1 LTRIDHVVGNVPDGEMDSWVDFYRKVLGFHRFWSFDIEDPYSGLRSRVLASPD--GKIRIPLNEPASGKRKSQIQEFLEY   78 (191)
T ss_pred             CceeeEEEeecChhHHHHHHHHHHHhhCCceeeEEccCcCcccEEEEEEECCC--CcEEEEEecCCCCCCccHHHHHHHH
Confidence            367999999999  9999999999999999887665443  234444555333  2344555543321   1   1   1


Q ss_pred             cCCCCceEEEEEeCCHHHHHHHHHHcCCeeecCCe
Q 022818           88 DIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPG  122 (291)
Q Consensus        88 ~~g~~~~~i~~~v~d~~~~~~~l~~~G~~~~~~~~  122 (291)
                      ..|.|+.||||.|+|+++++++|+++|+++...|.
T Consensus        79 ~~G~Gv~HIAf~vdDI~~~~~~L~~~Gv~~l~~P~  113 (191)
T cd07250          79 YGGAGVQHIALATDDIFATVAALRARGVEFLPIPD  113 (191)
T ss_pred             hCCCceeEEEEECCCHHHHHHHHHHcCCeeccCch
Confidence            24789999999999999999999999999877654

HppD and HmaS are non-heme iron-dependent dioxygenases, which modify a common substrate, 4-hydroxyphenylpyruvate (HPP), but yield different products. HPPD catalyzes the second reaction in tyrosine catabolism, the conversion of 4-hydroxyphenylpyruvate to homogentisate (2,5-dihydroxyphenylacetic acid, HG). HmaS converts HPP to 4-hydroxymandelate, a committed step in the formation of hydroxyphenylglycerine, a structural component of nonproteinogenic macrocyclic peptide antibiotics, such as vancomycin. If the emphasis is on catalytic chemistry, HPPD and HmaS are classified as members of a large family of alpha-keto acid dependent mononuclear non-heme iron oxygenases most of which require Fe(II), molecular oxygen, and an alpha-keto acid (typically alpha-ketoglutarate) to either oxygenate or oxidize a third substrate. Both enzymes are exceptions in that they require two,

>cd07250 HPPD_C_like C-terminal domain of 4-hydroxyphenylpyruvate dioxygenase (HppD) and hydroxymandelate Synthase (HmaS)

Probab=99.30  E-value=1.7e-11  Score=96.92  Aligned_cols=99  Identities=19%  Similarity=0.325  Sum_probs=74.1

Q ss_pred             CCceEEEeeeC--ChhhhHHHHHHhcCCeeeeeeccCC--ccceEEEeccccCCceeEEEEeeecCc--c-------eee
Q 022818          152 EPLCQVMLRVG--DLGRSIKFYEKALGMKLLRTVDKPE--YKYTLAMLGYAEEDQTTVLELTYNYGV--T-------EYT  218 (291)
Q Consensus       152 ~~~~~v~l~v~--d~~~~~~fy~~~lG~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~l~l~~~~~~--~-------~~~  218 (291)
                      .+++|+++.|+  |++++.+||+++|||++......++  .+.....+..+.  ....+++..+...  .       ...
T Consensus         2 ~~iDHv~i~V~~~dl~~a~~fY~~~LGf~~~~~~~~~~~~~~~~s~~l~~~~--g~i~l~L~~~~~~~~~s~~~~fl~~~   79 (191)
T cd07250           2 TRIDHVVGNVPDGEMDSWVDFYRKVLGFHRFWSFDIEDPYSGLRSRVLASPD--GKIRIPLNEPASGKRKSQIQEFLEYY   79 (191)
T ss_pred             ceeeEEEeecChhHHHHHHHHHHHhhCCceeeEEccCcCcccEEEEEEECCC--CcEEEEEecCCCCCCccHHHHHHHHh
Confidence            36899999999  9999999999999999887665433  233444444332  3566666654431  1       122


Q ss_pred             cCcceeEEEEEecchHHhHHHHHHHHHHhCCeeecCCc
Q 022818          219 KGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPG  256 (291)
Q Consensus       219 ~~~~~~hi~~~v~di~~~~~~l~~~~~~~G~~~~~~~~  256 (291)
                      .|+|++||||.|+|+++++++|    +++|++++..|.
T Consensus        80 ~G~Gv~HIAf~vdDI~~~~~~L----~~~Gv~~l~~P~  113 (191)
T cd07250          80 GGAGVQHIALATDDIFATVAAL----RARGVEFLPIPD  113 (191)
T ss_pred             CCCceeEEEEECCCHHHHHHHH----HHcCCeeccCch
Confidence            4689999999999999999999    999999988873

HppD and HmaS are non-heme iron-dependent dioxygenases, which modify a common substrate, 4-hydroxyphenylpyruvate (HPP), but yield different products. HPPD catalyzes the second reaction in tyrosine catabolism, the conversion of 4-hydroxyphenylpyruvate to homogentisate (2,5-dihydroxyphenylacetic acid, HG). HmaS converts HPP to 4-hydroxymandelate, a committed step in the formation of hydroxyphenylglycerine, a structural component of nonproteinogenic macrocyclic peptide antibiotics, such as vancomycin. If the emphasis is on catalytic chemistry, HPPD and HmaS are classified as members of a large family of alpha-keto acid dependent mononuclear non-heme iron oxygenases most of which require Fe(II), molecular oxygen, and an alpha-keto acid (typically alpha-ketoglutarate) to either oxygenate or oxidize a third substrate. Both enzymes are exceptions in that they require two,

>COG3565 Predicted dioxygenase of extradiol dioxygenase family [General function prediction only]

Probab=99.22  E-value=2.2e-10  Score=78.81  Aligned_cols=118  Identities=27%  Similarity=0.288  Sum_probs=74.7

Q ss_pred             eeeEEEEEEeCCHHHHHHHHHhhcCCEEEEEeecCCCceeEEEEecCCCCcceEEEeeecCCCC--cccCCCC--ce--E
Q 022818           22 RRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVT--SYDIGTG--FG--H   95 (291)
Q Consensus        22 ~~i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~--~~~~g~~--~~--~   95 (291)
                      +.+-|+.|.|+|++++.+||.++||++.-...+      +.+-+.+-+  ..++..+.......  ....|.+  .-  .
T Consensus         3 ~~~FHLA~pV~Dl~~tr~FYgevlG~~~GRstd------~wvdfDfyG--HQ~v~Hl~~q~~~~~~g~V~~~~v~~pHfG   74 (138)
T COG3565           3 PVPFHLAIPVNDLDETRRFYGEVLGCKEGRSTD------TWVDFDFYG--HQVVAHLTPQPDSQGSGKVDGHGVPPPHFG   74 (138)
T ss_pred             ccceEEeeeccccHHHHhhhhhhcccccccccc------eEEEeeecc--cEEEEEecCCcccccCcccCCCCCCCccce
Confidence            456899999999999999999999998743322      112222111  11222222221111  1112222  22  3


Q ss_pred             EEEEeCCHHHHHHHHHHcCCeeecCCeecCC---CceEEEEEECCCCCEEEEEeC
Q 022818           96 FAIATEDVYKLVENIRAKGGNVTREPGPLKG---GTTHIAFVKDPDGYIFELIQR  147 (291)
Q Consensus        96 i~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~---g~~~~~~~~Dp~G~~iel~~~  147 (291)
                      +.+.++|.-++.++|+++|+....+|....-   |..+.+++.||.||.+|+-..
T Consensus        75 vVl~~edW~alaerlea~gi~~~i~P~vRF~Ge~gEq~TlFl~DP~gN~lEfK~f  129 (138)
T COG3565          75 VVLPVEDWFALAERLEAAGIPFHIPPKVRFKGEPGEQRTLFLFDPSGNALEFKGF  129 (138)
T ss_pred             EEEEHHHHHHHHHHHHHcCCCcccCceEEecCCccceEEEEEECCCCCeeeeecc
Confidence            4677899999999999999987777765422   334458899999999998654

>COG2764 PhnB Uncharacterized protein conserved in bacteria [Function unknown]

Probab=99.18  E-value=2.7e-09  Score=78.28  Aligned_cols=118  Identities=20%  Similarity=0.213  Sum_probs=89.1

Q ss_pred             EEEEeC-CHHHHHHHHHhhcCCEEEEEeecCC----------CceeEEEEecCCCCcceEEEeeecCCCCccc-CCCCce
Q 022818           27 AVYRVG-DLDRTIKFYTECFGMKLLRKRDVPE----------EKYSNAFLGFGPEQSHFVVELTYNYGVTSYD-IGTGFG   94 (291)
Q Consensus        27 v~l~v~-d~~~~~~FY~~~lG~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~-~g~~~~   94 (291)
                      .-|..+ |.++|++||+++||.+...+....+          +...++.+.+++.    .+.+.......... .+..-.
T Consensus         4 PYl~f~gn~~~Al~fY~~vFgae~~~~~~~~d~~~~~~~~~~~~i~HA~l~i~g~----~im~sd~~~~~~~~~~~~~s~   79 (136)
T COG2764           4 PYLFFNGNAREALAFYKEVFGAEELKRVPFGDMPSSAGEPPGGRIMHAELRIGGS----TIMLSDAFPDMGATEGGGTSL   79 (136)
T ss_pred             eEEEECCCHHHHHHHHHHHhCceEEEEEEcCccCccccccccCceEEEEEEECCE----EEEEecCCCccCcccCCCeeE
Confidence            346778 9999999999999999998887777          5677777877632    22232222111111 222345


Q ss_pred             EEEEEeCCHHHHHHHHHHcCCeeecCCeecCCCceEEEEEECCCCCEEEEEeCCC
Q 022818           95 HFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRGP  149 (291)
Q Consensus        95 ~i~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~Dp~G~~iel~~~~~  149 (291)
                      .|.+.++|++++++++.+.|+++..++....||.+. ..++||.|+.|-|.....
T Consensus        80 ~l~~~~~d~da~f~~a~~aGa~v~mpl~~~fwG~r~-G~v~D~fGv~W~l~~~~~  133 (136)
T COG2764          80 SLDLYVEDVDAVFERAAAAGATVVMPLEDTFWGDRY-GQVTDPFGVVWMLNTPVE  133 (136)
T ss_pred             EEEEEehHHHHHHHHHHhcCCeEEecchhcCcccce-EEEECCCCCEEEEecCcc
Confidence            667888899999999999999999999999998874 889999999999876543

>COG3565 Predicted dioxygenase of extradiol dioxygenase family [General function prediction only]

Probab=99.15  E-value=7.1e-10  Score=76.36  Aligned_cols=118  Identities=19%  Similarity=0.182  Sum_probs=76.3

Q ss_pred             CceEEEeeeCChhhhHHHHHHhcCCeeeeeeccCCccceEEEeccccCCceeEEEEeeecCcce----ee--cCcceeEE
Q 022818          153 PLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTE----YT--KGNAYAQV  226 (291)
Q Consensus       153 ~~~~v~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~----~~--~~~~~~hi  226 (291)
                      .+.|..+.|.|++++++||.++||+...+..+      +++-+..=.  ......+....+...    ..  -......+
T Consensus         4 ~~FHLA~pV~Dl~~tr~FYgevlG~~~GRstd------~wvdfDfyG--HQ~v~Hl~~q~~~~~~g~V~~~~v~~pHfGv   75 (138)
T COG3565           4 VPFHLAIPVNDLDETRRFYGEVLGCKEGRSTD------TWVDFDFYG--HQVVAHLTPQPDSQGSGKVDGHGVPPPHFGV   75 (138)
T ss_pred             cceEEeeeccccHHHHhhhhhhcccccccccc------eEEEeeecc--cEEEEEecCCcccccCcccCCCCCCCccceE
Confidence            36799999999999999999999999765443      233222110  122333322111110    00  11133456


Q ss_pred             EEEecchHHhHHHHHHHHHHhCCeeecCCccCCC---CCceEEEEECCCCceEEEeech
Q 022818          227 AISTDDVYKSAEVVNLVTQELGGKITRQPGSIPG---LNTKITSFVDPDGWKTVLVDNE  282 (291)
Q Consensus       227 ~~~v~di~~~~~~l~~~~~~~G~~~~~~~~~~~~---~~~~~~~~~DpdG~~iel~~~~  282 (291)
                      .|.++|.-+..++|    +++|+.+..+|.-.-.   +..+..++.||.||.+|+-.-.
T Consensus        76 Vl~~edW~alaerl----ea~gi~~~i~P~vRF~Ge~gEq~TlFl~DP~gN~lEfK~fR  130 (138)
T COG3565          76 VLPVEDWFALAERL----EAAGIPFHIPPKVRFKGEPGEQRTLFLFDPSGNALEFKGFR  130 (138)
T ss_pred             EEEHHHHHHHHHHH----HHcCCCcccCceEEecCCccceEEEEEECCCCCeeeeeccc
Confidence            67788988888999    9999998877755321   1347799999999999996443

>cd06588 PhnB_like Escherichia coli PhnB and similar proteins; the E

Probab=99.14  E-value=1.1e-09  Score=81.14  Aligned_cols=111  Identities=14%  Similarity=0.055  Sum_probs=70.6

Q ss_pred             Eeee-CChhhhHHHHHHhcCCeeeeeeccCC----------ccceEEEeccccCCceeEEEEeeecCcceeecCcceeEE
Q 022818          158 MLRV-GDLGRSIKFYEKALGMKLLRTVDKPE----------YKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQV  226 (291)
Q Consensus       158 ~l~v-~d~~~~~~fy~~~lG~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~hi  226 (291)
                      .|.+ .|.+++++||+++||+++......++          +.+....+..+    +..+.+....+.... .+.+..++
T Consensus         4 ~L~~~~~~~eAi~FY~~~fg~~~~~~~~~~~~~~~~~~~~~~~i~ha~l~i~----g~~l~~~d~~~~~~~-~~~~~~~l   78 (128)
T cd06588           4 YLWFNGNAEEALEFYQSVFGGEITSLTRYGEGPPPDPEEPEGKVMHAELTIG----GQRLMASDGGPGFPF-TFGNGISL   78 (128)
T ss_pred             EEeeCCCHHHHHHHHHHHhCCEeEEEEEcCCCCCCCCCCcCCcEEEEEEEEC----CEEEEEEcCCCCCCC-CCCCCEEE
Confidence            4667 99999999999999999876653211          11122222211    223333222211111 12344689


Q ss_pred             EEEecc---hHHhHHHHHHHHHHhCCeeecCCccCCCCCceEEEEECCCCceEEEe
Q 022818          227 AISTDD---VYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLV  279 (291)
Q Consensus       227 ~~~v~d---i~~~~~~l~~~~~~~G~~~~~~~~~~~~~~~~~~~~~DpdG~~iel~  279 (291)
                      ++.|+|   +++++++|    ++.| +++.+|...++ +.+.++++||+|+.|+|.
T Consensus        79 ~i~~~~~e~v~~~~~~l----~~~g-~~~~~~~~~~~-g~~~~~v~Dp~G~~W~i~  128 (128)
T cd06588          79 SVECDSEEEADRLFEAL----SEGG-TVLMPLQKTFW-SPLFGWVTDRFGVSWQIN  128 (128)
T ss_pred             EEECCCHHHHHHHHHHH----hcCC-eEeccchhcCc-ccccEEEECCCCCEEEeC
Confidence            999987   44555555    6555 88888888877 568999999999999984

coli phnB gene is found next to an operon involved in the cleavage of carbon-phosphorus bonds in unactivated alkylphosphonates. The Escherichia coli phnB gene is found next to an operon of fourteen genes (phnC-to-phnP) related to the cleavage of carbon-phosphorus (C-P) bonds in unactivated alkylphosphonates, supporting bacterial growth on alkylphosphonates as the sole phosphorus source. It was originally considered part of that operon. PhnB appears to play no direct catalytic role in the usage of alkylphosphonate. Although many of the proteins in this family have been annotated as 3-demethylubiquinone-9 3-methyltransferase enzymes by automatic annotation programs, the experimental evidence for this assignment is lacking. In Escherichia coli, the gene coding 3-demethylubiquinone-9 3-methyltransferase enzyme is ubiG, which belongs to the AdoMet-MTase protein family. PhnB-like proteins adopt a structural fold similar to

>COG2764 PhnB Uncharacterized protein conserved in bacteria [Function unknown]

Probab=99.14  E-value=2.1e-09  Score=78.81  Aligned_cols=117  Identities=16%  Similarity=0.171  Sum_probs=83.3

Q ss_pred             EeeeC-ChhhhHHHHHHhcCCeeeeeeccCC----------ccceEEEeccccCCceeEEEEeeecCcceeec-CcceeE
Q 022818          158 MLRVG-DLGRSIKFYEKALGMKLLRTVDKPE----------YKYTLAMLGYAEEDQTTVLELTYNYGVTEYTK-GNAYAQ  225 (291)
Q Consensus       158 ~l~v~-d~~~~~~fy~~~lG~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~-~~~~~h  225 (291)
                      -|.++ |.+++++||+++||.++.......+          +...-+.+..+    +..|-+....+...... ++....
T Consensus         5 Yl~f~gn~~~Al~fY~~vFgae~~~~~~~~d~~~~~~~~~~~~i~HA~l~i~----g~~im~sd~~~~~~~~~~~~~s~~   80 (136)
T COG2764           5 YLFFNGNAREALAFYKEVFGAEELKRVPFGDMPSSAGEPPGGRIMHAELRIG----GSTIMLSDAFPDMGATEGGGTSLS   80 (136)
T ss_pred             EEEECCCHHHHHHHHHHHhCceEEEEEEcCccCccccccccCceEEEEEEEC----CEEEEEecCCCccCcccCCCeeEE
Confidence            35677 9999999999999999888776655          33333333322    23333333332222122 224456


Q ss_pred             EEEEecchHHhHHHHHHHHHHhCCeeecCCccCCCCCceEEEEECCCCceEEEeechh
Q 022818          226 VAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNED  283 (291)
Q Consensus       226 i~~~v~di~~~~~~l~~~~~~~G~~~~~~~~~~~~~~~~~~~~~DpdG~~iel~~~~~  283 (291)
                      |.+.++|+++..+++    .++|+++..++....| |.++..++||.|+.|-|.....
T Consensus        81 l~~~~~d~da~f~~a----~~aGa~v~mpl~~~fw-G~r~G~v~D~fGv~W~l~~~~~  133 (136)
T COG2764          81 LDLYVEDVDAVFERA----AAAGATVVMPLEDTFW-GDRYGQVTDPFGVVWMLNTPVE  133 (136)
T ss_pred             EEEEehHHHHHHHHH----HhcCCeEEecchhcCc-ccceEEEECCCCCEEEEecCcc
Confidence            788888888888888    9999999999999988 5699999999999999976543

>cd06588 PhnB_like Escherichia coli PhnB and similar proteins; the E

Probab=99.12  E-value=5.9e-09  Score=77.14  Aligned_cols=110  Identities=16%  Similarity=0.212  Sum_probs=75.1

Q ss_pred             EEEe-CCHHHHHHHHHhhcCCEEEEEeec----------CCCceeEEEEecCCCCcceEEEeeecCCCCcccCCCCceEE
Q 022818           28 VYRV-GDLDRTIKFYTECFGMKLLRKRDV----------PEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHF   96 (291)
Q Consensus        28 ~l~v-~d~~~~~~FY~~~lG~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~~~~i   96 (291)
                      .|.+ .|.+++++||+++||+++......          ..+.+....+..++.  .+++  ......... .+.+..++
T Consensus         4 ~L~~~~~~~eAi~FY~~~fg~~~~~~~~~~~~~~~~~~~~~~~i~ha~l~i~g~--~l~~--~d~~~~~~~-~~~~~~~l   78 (128)
T cd06588           4 YLWFNGNAEEALEFYQSVFGGEITSLTRYGEGPPPDPEEPEGKVMHAELTIGGQ--RLMA--SDGGPGFPF-TFGNGISL   78 (128)
T ss_pred             EEeeCCCHHHHHHHHHHHhCCEeEEEEEcCCCCCCCCCCcCCcEEEEEEEECCE--EEEE--EcCCCCCCC-CCCCCEEE
Confidence            4666 899999999999999999876542          123344555665542  2222  222111111 12244578


Q ss_pred             EEEeCC---HHHHHHHHHHcCCeeecCCeecCCCceEEEEEECCCCCEEEE
Q 022818           97 AIATED---VYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFEL  144 (291)
Q Consensus        97 ~~~v~d---~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~Dp~G~~iel  144 (291)
                      ++.|+|   +++++++|.+.| ++..++...+||.+. ..++||+|+.|+|
T Consensus        79 ~i~~~~~e~v~~~~~~l~~~g-~~~~~~~~~~~g~~~-~~v~Dp~G~~W~i  127 (128)
T cd06588          79 SVECDSEEEADRLFEALSEGG-TVLMPLQKTFWSPLF-GWVTDRFGVSWQI  127 (128)
T ss_pred             EEECCCHHHHHHHHHHHhcCC-eEeccchhcCccccc-EEEECCCCCEEEe
Confidence            888886   778889987766 888888888888765 8999999999987

coli phnB gene is found next to an operon involved in the cleavage of carbon-phosphorus bonds in unactivated alkylphosphonates. The Escherichia coli phnB gene is found next to an operon of fourteen genes (phnC-to-phnP) related to the cleavage of carbon-phosphorus (C-P) bonds in unactivated alkylphosphonates, supporting bacterial growth on alkylphosphonates as the sole phosphorus source. It was originally considered part of that operon. PhnB appears to play no direct catalytic role in the usage of alkylphosphonate. Although many of the proteins in this family have been annotated as 3-demethylubiquinone-9 3-methyltransferase enzymes by automatic annotation programs, the experimental evidence for this assignment is lacking. In Escherichia coli, the gene coding 3-demethylubiquinone-9 3-methyltransferase enzyme is ubiG, which belongs to the AdoMet-MTase protein family. PhnB-like proteins adopt a structural fold similar to

>TIGR01263 4HPPD 4-hydroxyphenylpyruvate dioxygenase

Probab=99.11  E-value=7.7e-10  Score=96.16  Aligned_cols=103  Identities=21%  Similarity=0.336  Sum_probs=73.7

Q ss_pred             CCcceeeEEEEEEeC--CHHHHHHHHHhhcCCEEEEEeecCCC--ceeEEEEecCCCCcceEEEeeecCC---CC-----
Q 022818           18 KKDKRRFLHAVYRVG--DLDRTIKFYTECFGMKLLRKRDVPEE--KYSNAFLGFGPEQSHFVVELTYNYG---VT-----   85 (291)
Q Consensus        18 ~~~~~~i~hv~l~v~--d~~~~~~FY~~~lG~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~~~~~~~---~~-----   85 (291)
                      ...+.+|+||++.|+  |+++++.||+++|||+..........  ......+....+  ...+++..+..   .+     
T Consensus       153 ~~~~~~iDHv~i~V~~~dl~~~~~fY~~~lGf~~~~~~~~~~~~~~~~s~~~~~~~g--~~~i~L~ep~~~~~~s~i~~f  230 (353)
T TIGR01263       153 GVGLIAIDHLVGNVYRGQMEPWAEFYEKIFGFREIRSFDIKTEYSALNSIVMASPDG--KVKIPLNEPASGKDKSQIEEF  230 (353)
T ss_pred             CCCeEEeeeeEcccCCccHHHHHHHHHHHhCCceeeEEEeccCCccEEEEEEECCCC--cEEEEEeccCCCCCCCHHHHH
Confidence            355899999999999  99999999999999999876554322  222223332222  34455554311   11     


Q ss_pred             -cccCCCCceEEEEEeCCHHHHHHHHHHcCCeeecCCe
Q 022818           86 -SYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPG  122 (291)
Q Consensus        86 -~~~~g~~~~~i~~~v~d~~~~~~~l~~~G~~~~~~~~  122 (291)
                       ....|.|+.||||.|+|+++++++|+++|+++...|.
T Consensus       231 l~~~~g~Gv~HiAf~vdDi~~~~~~l~~~Gv~~l~~P~  268 (353)
T TIGR01263       231 LEFYNGAGVQHIALNTDDIVRTVRALRARGVEFLDTPD  268 (353)
T ss_pred             HHHcCCCCccEEEEEcCCHHHHHHHHHHcCCccCcCCH
Confidence             1124789999999999999999999999999877653

This protein oxidizes 4-hydroxyphenylpyruvate, a tyrosine and phenylalanine catabolite, to homogentisate. Homogentisate can undergo a further non-enzymatic oxidation and polymerization into brown pigments that protect some bacterial species from light. A similar process occurs spontaneously in blood and is hemolytic (see PubMed:8000039). In some bacterial species, this enzyme has been studied as a hemolysin.

>PF13468 Glyoxalase_3: Glyoxalase-like domain; PDB: 3P8A_B

Probab=99.07  E-value=4.7e-09  Score=82.06  Aligned_cols=147  Identities=24%  Similarity=0.332  Sum_probs=81.9

Q ss_pred             eEEEEEEeCCHHHHHHHHHhhcCCEEEEEeecCCCceeEEEEecCCCCcceEEEeeecCC--CC---cc-------cCCC
Q 022818           24 FLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYG--VT---SY-------DIGT   91 (291)
Q Consensus        24 i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~--~~---~~-------~~g~   91 (291)
                      |+|+.+.|+|++++.++|++.|||.+......+..++.-..+.+++..    |++....+  ..   ..       ..+.
T Consensus         1 lDH~v~~v~dl~~a~~~~~~~lGf~~~~gg~h~~~GT~N~li~f~~~Y----lEli~i~~~~~~~~~~~~~~~~~~~~~~   76 (175)
T PF13468_consen    1 LDHLVIAVRDLDAAVERFEQRLGFTVTPGGEHPGWGTANALIPFGDGY----LELIAIDPEAPAPDRGRWFGLDRLAGGE   76 (175)
T ss_dssp             EEEEEEE-TTGGG----GGGS--S--EEEEE-TTT-EEEEEEE-SSSE----EEEEEES-HHHSTGGGT-TTTHHHHT--
T ss_pred             CCEEEEEcCCHHHHHHhhhhcceEeecCCCcCCCCccEEEEEeeCCce----EEEEEeCCcccccccccceechhhcCCC
Confidence            799999999999999999778999999877776645555555555532    33333211  11   11       1467


Q ss_pred             CceEEEEEeCCHHHHHHHHHHcCCeeecCCeecCCCceE--EEEEECC----CCCEEEEEeCCC-CC---------CCce
Q 022818           92 GFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTH--IAFVKDP----DGYIFELIQRGP-TP---------EPLC  155 (291)
Q Consensus        92 ~~~~i~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~--~~~~~Dp----~G~~iel~~~~~-~~---------~~~~  155 (291)
                      |+..+|++++|+++..++|++.|+.... +...+++...  .+++.+.    .+..-.+++..+ .+         .+|.
T Consensus        77 g~~~~~l~t~d~~~~~~~l~~~G~~~~~-r~~~dG~~~~w~~~~~~~~~~p~~~~~Pf~i~~~~~~~~~~~h~ng~~~i~  155 (175)
T PF13468_consen   77 GLYGWALRTDDIEAVAARLRAAGLDAGS-RVRPDGGDLRWRLAFPEDGALPFGGLLPFFIQWETPHPEWARHPNGALGIT  155 (175)
T ss_dssp             EEEEEEEE-S-HHHHHHHHHTTT-EEEE-EEEEEE-EEEEEEEEEE-SS---SS---EEEEESS-CCHHTTT--TTEEEE
T ss_pred             CeEEEEEecCCHHHHHHHHHhcCCCCCC-cCcCCCCcceEEEEEeCCcccccCCCCcEEEEeCCCCcccccCCCccceEE
Confidence            8999999999999999999999976211 1222222222  2444553    234445553332 21         2589


Q ss_pred             EEEeeeCChhhhHHHHHHhc
Q 022818          156 QVMLRVGDLGRSIKFYEKAL  175 (291)
Q Consensus       156 ~v~l~v~d~~~~~~fy~~~l  175 (291)
                      ++.+.++|.+++.++|.++|
T Consensus       156 ~v~i~~~d~~~~~~~~~~l~  175 (175)
T PF13468_consen  156 RVVIAVPDPDAAAARYARLL  175 (175)
T ss_dssp             EEEEEETTHHHHHHHHHHH-
T ss_pred             EEEEEeCCHHHHHHHHHhhC
Confidence            99999999999999999875

>COG3607 Predicted lactoylglutathione lyase [General function prediction only]

Probab=98.98  E-value=1.2e-08  Score=71.73  Aligned_cols=119  Identities=21%  Similarity=0.207  Sum_probs=71.9

Q ss_pred             ceEEEeeeCChhhhHHHHHHhcCCeeeeeeccCCccceEEEeccccCCceeEEEEeeec-------CcceeecCcceeEE
Q 022818          154 LCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNY-------GVTEYTKGNAYAQV  226 (291)
Q Consensus       154 ~~~v~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~-------~~~~~~~~~~~~hi  226 (291)
                      ...|+|.|.|++++.+||+. |||+.-........  ......   +  ...+-|....       .+........-..|
T Consensus         4 mIFvNLPVkDL~~S~~Fy~a-lGfk~Npq~sde~a--~~mi~~---~--ni~vMLL~~~~fq~F~~~~i~dt~~s~evli   75 (133)
T COG3607           4 MIFVNLPVKDLEASKAFYTA-LGFKFNPQFSDEDA--ACMIIS---D--NIFVMLLEEARFQTFTKRQIADTTKSREVLI   75 (133)
T ss_pred             EEEEecchhhHHHHHHHHHH-hCcccCCCcccccc--eeEEEe---c--cEEEEEeccHHhhhhcccccccccCCceEEE
Confidence            46789999999999999977 99996654432221  111122   1  1111111110       01111233455789


Q ss_pred             EEEecchHHhHHHHHHHHHHhCCeeecCCccCCCCCceEEEEECCCCceEEEeechh
Q 022818          227 AISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNED  283 (291)
Q Consensus       227 ~~~v~di~~~~~~l~~~~~~~G~~~~~~~~~~~~~~~~~~~~~DpdG~~iel~~~~~  283 (291)
                      +|.+.+ .+.++.+-+++.++|+++..+|.....  ....-|.|||||.||++--..
T Consensus        76 ~ls~~s-~eevd~~v~ka~eaGGk~~~~~~d~gf--MYg~~fqDpDGh~wE~l~m~~  129 (133)
T COG3607          76 SLSAGS-REEVDELVDKALEAGGKPANEPQDEGF--MYGRSFQDPDGHVWEFLWMDP  129 (133)
T ss_pred             EeccCc-HHHHHHHHHHHHHcCCCCCCCcccccc--ccceeeeCCCCCeEEEEEeCH
Confidence            999876 333344434449999998777665322  234569999999999986544

>COG0346 GloA Lactoylglutathione lyase and related lyases [Amino acid transport and metabolism]

Probab=98.98  E-value=3.3e-09  Score=78.31  Aligned_cols=121  Identities=24%  Similarity=0.269  Sum_probs=72.8

Q ss_pred             CceEEEeeeCChhhhHHHHHHhcCCeeeeeeccCCcc---ceEEEeccccCCceeEEE--------EeeecCcc-eeecC
Q 022818          153 PLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYK---YTLAMLGYAEEDQTTVLE--------LTYNYGVT-EYTKG  220 (291)
Q Consensus       153 ~~~~v~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~l~--------l~~~~~~~-~~~~~  220 (291)
                      ++.|+.+.|+|++++++||+++||+++..........   ....+.............        ........ ....+
T Consensus         2 ~l~hv~l~v~dl~~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (138)
T COG0346           2 GIHHVTLAVPDLEASIDFYTDVLGLRLVKDTVNEADDGGGYHLLFLDGDGGPGELLAFFGFEGRAGTGFVGDVALGVPGG   81 (138)
T ss_pred             ceEEEEEeeCCHhHhHHHHHhhcCCeeeeecccccCCceEEEEEeccCCCCcccceeecccccccccccccceEEeecCc
Confidence            5889999999999999999999999988765433221   112211111000000000        00000000 01111


Q ss_pred             -cceeEEEEEecc---hHHhHHHHHHHHHHhCCeeecCCccCCCCCceEEEEECCCCceEEEee
Q 022818          221 -NAYAQVAISTDD---VYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVD  280 (291)
Q Consensus       221 -~~~~hi~~~v~d---i~~~~~~l~~~~~~~G~~~~~~~~~~~~~~~~~~~~~DpdG~~iel~~  280 (291)
                       .+..|+++.+++   +.......    ...|..+...+. ..+  +..+|++||||+.|||++
T Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~----~~~G~~~~~~~~-~~~--~~~~~~~dp~g~~~e~~~  138 (138)
T COG0346          82 DLGLGHLAFEVDDEAFGDAALAFL----DPDGVRIELGEP-GRG--GVHVYFRDPDGILIELAT  138 (138)
T ss_pred             hhccCceeEecccccccceEEEee----CCCCCEEEeecC-CCc--ceEEEEECCCCcEEEeeC
Confidence             246799999998   55555566    778888765544 222  238999999999999974

>COG0346 GloA Lactoylglutathione lyase and related lyases [Amino acid transport and metabolism]

Probab=98.95  E-value=4e-09  Score=77.90  Aligned_cols=122  Identities=22%  Similarity=0.368  Sum_probs=72.8

Q ss_pred             eeeEEEEEEeCCHHHHHHHHHhhcCCEEEEEeecCCCce--eEEEEecCCC-CcceEEEe--------eecCCCCcccCC
Q 022818           22 RRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKY--SNAFLGFGPE-QSHFVVEL--------TYNYGVTSYDIG   90 (291)
Q Consensus        22 ~~i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~--~~~~~~~~~~-~~~~~l~~--------~~~~~~~~~~~g   90 (291)
                      ++++|+.|.|+|++++.+||+++||++............  ....+..... ........        ............
T Consensus         1 ~~l~hv~l~v~dl~~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (138)
T COG0346           1 MGIHHVTLAVPDLEASIDFYTDVLGLRLVKDTVNEADDGGGYHLLFLDGDGGPGELLAFFGFEGRAGTGFVGDVALGVPG   80 (138)
T ss_pred             CceEEEEEeeCCHhHhHHHHHhhcCCeeeeecccccCCceEEEEEeccCCCCcccceeecccccccccccccceEEeecC
Confidence            468999999999999999999999999988655332211  1111111110 00000000        000000000011


Q ss_pred             --CCceEEEEEeCC---HHHHHHHHHHcCCeeecCCeecCCCceEEEEEECCCCCEEEEEe
Q 022818           91 --TGFGHFAIATED---VYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQ  146 (291)
Q Consensus        91 --~~~~~i~~~v~d---~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~Dp~G~~iel~~  146 (291)
                        .+..|+++.+.+   ...........|..+..... ..++.  .+|++||||++||+.+
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~-~~~~~--~~~~~dp~g~~~e~~~  138 (138)
T COG0346          81 GDLGLGHLAFEVDDEAFGDAALAFLDPDGVRIELGEP-GRGGV--HVYFRDPDGILIELAT  138 (138)
T ss_pred             chhccCceeEecccccccceEEEeeCCCCCEEEeecC-CCcce--EEEEECCCCcEEEeeC
Confidence              246799999988   66666777777877654433 32322  5899999999999864

>PF14696 Glyoxalase_5: Hydroxyphenylpyruvate dioxygenase, HPPD, N-terminal ; PDB: 1CJX_A 2R5V_A

Probab=98.92  E-value=1e-08  Score=75.61  Aligned_cols=124  Identities=15%  Similarity=0.225  Sum_probs=83.7

Q ss_pred             CCcceeeEEEEEEeCCHHHHHHHHHhhcCCEEEEEeecCCCceeEEEEecCCCCcceEEEeeecCCCCcc--cCCCCceE
Q 022818           18 KKDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSY--DIGTGFGH   95 (291)
Q Consensus        18 ~~~~~~i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~--~~g~~~~~   95 (291)
                      +..+.+++||.+.+++.+++..+++. |||+...+.....    ...++  .+.+.+++..........+  .+|++++.
T Consensus         4 P~g~~G~dFvEFa~~~~~~l~~~~~~-lGF~~~a~hrsk~----v~l~r--QG~I~~vln~ep~s~a~~~~~~HG~sv~a   76 (139)
T PF14696_consen    4 PLGLDGFDFVEFAVPDAQALAQLFTA-LGFQPVARHRSKD----VTLYR--QGDINFVLNSEPDSFAAEFAAQHGPSVCA   76 (139)
T ss_dssp             TT-EEEEEEEEEE-SSTTSCHHHHCC-CCEEEECCECCCS----EEEEE--ETTEEEEEEEESTSCHHHHHHHHSSEEEE
T ss_pred             CCCCCCeEEEEEecCCHHHHHHHHHH-hCcceEEecCCcc----eEEEE--eCCEEEEEeCCCcchHHHHHHhcCCEEEE
Confidence            36789999999999998888888865 9999998765332    33344  3356777755332222222  27899999


Q ss_pred             EEEEeCCHHHHHHHHHHcCCeeecCCeecCCCceEEEEEECCCCCEEEEEeCCCC
Q 022818           96 FAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRGPT  150 (291)
Q Consensus        96 i~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~Dp~G~~iel~~~~~~  150 (291)
                      |+|+|+|.+++++++.++|++....|...  +...+.-++.+.|.++.|++....
T Consensus        77 iafrV~Da~~A~~rA~~~GA~~~~~~~~~--~e~~~paI~g~G~sl~yfVdr~~~  129 (139)
T PF14696_consen   77 IAFRVDDAAAAYERAVALGAEPVQEPTGP--GELNIPAIRGIGGSLHYFVDRYGD  129 (139)
T ss_dssp             EEEEES-HHHHHHHHHHTT--EEEEEEET--T-BEEEEEE-CCC-EEEEEE--SS
T ss_pred             EEEEeCCHHHHHHHHHHcCCcCcccCCCC--CcEeeeeEEccCCCEEEEEecCCC
Confidence            99999999999999999999877654322  233446789999999999987654

>PLN02875 4-hydroxyphenylpyruvate dioxygenase

Probab=98.89  E-value=8.3e-09  Score=89.39  Aligned_cols=101  Identities=21%  Similarity=0.345  Sum_probs=73.3

Q ss_pred             CcceeeEEEEEEeCCHHHHHHHHHhhcCCEEEEEeecCCC-----ceeEEEEecCCCCcceEEEeeecCC-------CCc
Q 022818           19 KDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEE-----KYSNAFLGFGPEQSHFVVELTYNYG-------VTS   86 (291)
Q Consensus        19 ~~~~~i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~l~~~~~~~-------~~~   86 (291)
                      ..+.+|+||++.|+++++++.||+++|||+..+....++-     ..+...+..++..  ..+++..+..       ...
T Consensus       176 ~gl~~IDHi~iaV~~ld~a~~fY~~vlGf~~~~~~d~~~i~~~~sgl~S~vl~sp~g~--v~ipLnEP~~~~~~~SqI~e  253 (398)
T PLN02875        176 YGLRRLDHAVGNVPNLLPAVNYIAGFTGFHEFAEFTAEDVGTVDSGLNSMVLASNNEM--VLLPLNEPTFGTKRKSQIQT  253 (398)
T ss_pred             CCcceeCcceechhhHHHHHHHHHHhcCCeeeeeeccccccccccceEEEEEEcCCCc--EEEEeccCCCCCCCcChHHH
Confidence            3478999999999999999999999999998865443221     2345555544332  3444444321       111


Q ss_pred             c---cCCCCceEEEEEeCCHHHHHHHHHHc----CCeeecCC
Q 022818           87 Y---DIGTGFGHFAIATEDVYKLVENIRAK----GGNVTREP  121 (291)
Q Consensus        87 ~---~~g~~~~~i~~~v~d~~~~~~~l~~~----G~~~~~~~  121 (291)
                      +   ..|.|++||||.|+|+.++.++|+++    |++....|
T Consensus       254 FL~~~~G~GIQHIAl~tdDI~~av~~Lra~~~~~Gv~fL~~P  295 (398)
T PLN02875        254 YLEHNEGPGLQHLALKSDDIFGTLREMRARSHIGGFEFMPPP  295 (398)
T ss_pred             HHHhcCCCCeeEEEeecCCHHHHHHHHHhccccCCeecCCCC
Confidence            2   25789999999999999999999999    98877654

>COG3607 Predicted lactoylglutathione lyase [General function prediction only]

Probab=98.81  E-value=5.9e-08  Score=68.25  Aligned_cols=117  Identities=21%  Similarity=0.319  Sum_probs=72.1

Q ss_pred             eeEEEEEEeCCHHHHHHHHHhhcCCEEEEEeecCCCceeEEEEecCCCCcceEEEeeecCCCCcc-------cCCCCceE
Q 022818           23 RFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSY-------DIGTGFGH   95 (291)
Q Consensus        23 ~i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~-------~~g~~~~~   95 (291)
                      +.-.|.|.|.|++++.+||+. |||+.-....  +.. . ..+-.++ .+..+| +... .-..+       .....-.-
T Consensus         3 ~mIFvNLPVkDL~~S~~Fy~a-lGfk~Npq~s--de~-a-~~mi~~~-ni~vML-L~~~-~fq~F~~~~i~dt~~s~evl   74 (133)
T COG3607           3 QMIFVNLPVKDLEASKAFYTA-LGFKFNPQFS--DED-A-ACMIISD-NIFVML-LEEA-RFQTFTKRQIADTTKSREVL   74 (133)
T ss_pred             eEEEEecchhhHHHHHHHHHH-hCcccCCCcc--ccc-c-eeEEEec-cEEEEE-eccH-HhhhhcccccccccCCceEE
Confidence            446789999999999999998 9999854322  111 1 2222222 111111 1111 00000       01223345


Q ss_pred             EEEEeC---CHHHHHHHHHHcCCeeecCCeecCCCceEEEEEECCCCCEEEEEeCCC
Q 022818           96 FAIATE---DVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRGP  149 (291)
Q Consensus        96 i~~~v~---d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~Dp~G~~iel~~~~~  149 (291)
                      +|+.+.   ++|++.+++.+.|.++..++.+...  .....|.|||||.||++.-++
T Consensus        75 i~ls~~s~eevd~~v~ka~eaGGk~~~~~~d~gf--MYg~~fqDpDGh~wE~l~m~~  129 (133)
T COG3607          75 ISLSAGSREEVDELVDKALEAGGKPANEPQDEGF--MYGRSFQDPDGHVWEFLWMDP  129 (133)
T ss_pred             EEeccCcHHHHHHHHHHHHHcCCCCCCCcccccc--ccceeeeCCCCCeEEEEEeCH
Confidence            677774   5889999999999998777655543  222568999999999987654

>KOG0638 consensus 4-hydroxyphenylpyruvate dioxygenase [Amino acid transport and metabolism]

Probab=98.70  E-value=2.9e-08  Score=80.83  Aligned_cols=132  Identities=15%  Similarity=0.179  Sum_probs=90.4

Q ss_pred             CCceEEEeeeCChhhhHHHHHHhcCCeeeeeeccCCccceEEEeccccCCceeEEEEeeecCcce-----eecCcceeEE
Q 022818          152 EPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTE-----YTKGNAYAQV  226 (291)
Q Consensus       152 ~~~~~v~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~-----~~~~~~~~hi  226 (291)
                      .+++||.+.|.|...+..||+..|||++....+...+...+......++...+.+.-..+++.+.     ...|.+.--+
T Consensus        16 l~f~Hi~F~vgna~q~A~~y~~~fGfep~A~~~letg~~~~~s~alr~g~~vFv~~s~~~p~~~~~G~~l~~Hgdgvkdv   95 (381)
T KOG0638|consen   16 LRFHHIEFWVGNAKQAARWYCSGFGFEPLAYRGLETGSREWASHALRQGKIVFVFNSAYNPDNSEYGDHLVKHGDGVKDV   95 (381)
T ss_pred             eeeeEEEEEecCcHHHHHHHHhhcCCcchhcccccccchHHHHHHhhcCCEEEEEecCCCCCchhhhhhhhhcccchhce
Confidence            46899999999999999999999999987755433322222222222221222222222222211     1256678899


Q ss_pred             EEEecchHHhHHHHHHHHHHhCCeeecCCccCCCC--CceEEEEECCCCceEEEeechhhhhh
Q 022818          227 AISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGL--NTKITSFVDPDGWKTVLVDNEDFLKE  287 (291)
Q Consensus       227 ~~~v~di~~~~~~l~~~~~~~G~~~~~~~~~~~~~--~~~~~~~~DpdG~~iel~~~~~~~~~  287 (291)
                      ||.|+|.+++...+    .++|+.+..+|......  ..+++.++.+.-....+++++.+.++
T Consensus        96 afeVeD~da~~~~~----va~Ga~v~~~p~~~~da~G~v~~A~l~tygd~thtlvEr~~y~g~  154 (381)
T KOG0638|consen   96 AFEVEDADAIFQEA----VANGAKVVRPPWEESDAQGAVTYAVLKTYGDTTHTLVERKGYKGP  154 (381)
T ss_pred             EEEecchHHHHHHH----HHcCCcccCCcceeeccCCcEEEEEEecccchhhhhhhhcccccc
Confidence            99999999999999    99999999998775432  24778888887777778887776654

>PF14506 CppA_N: CppA N-terminal; PDB: 3E0R_D

Probab=98.68  E-value=1.9e-06  Score=60.46  Aligned_cols=114  Identities=23%  Similarity=0.303  Sum_probs=64.7

Q ss_pred             EEEEEEeCCHHHHHHHHHhhcCCEEEEEeecCCCceeEEEEecCCCCcceEEEeeecCCCCcccCCCCceEEEEEeCCHH
Q 022818           25 LHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIATEDVY  104 (291)
Q Consensus        25 ~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~~~~i~~~v~d~~  104 (291)
                      .+-+|.|+|-+..++||+++|||++..+..      .+++|+.......|+++-++...........-+.++.+.|++..
T Consensus         2 ~~PvlRVnnR~~ni~FY~~~LGfkll~EEn------a~a~lg~~~~~erlvlEESP~~rtr~V~G~KKl~~ivIkv~~~~   75 (125)
T PF14506_consen    2 IIPVLRVNNRDLNIDFYQKTLGFKLLSEEN------ALAILGDQQKEERLVLEESPSMRTRAVEGPKKLNRIVIKVPNPK   75 (125)
T ss_dssp             EEEEEEESSHHHHHHHHTTTT--EEEEEET------TEEEEE-TT--EEEEEEE--TTT-B--SSS-SEEEEEEEESSHH
T ss_pred             cCceEEEcCHHHhHHHHHhccCcEEeeccc------cEEEecCCCCceEEEEecCCccccccccCcceeeEEEEEcCCHH
Confidence            467899999999999999999999988754      46777765555567776555444333333446889999999877


Q ss_pred             HHHHHHHHcCCeeecCCeecCCCceEEEEEECCCCCEEEEEeCC
Q 022818          105 KLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRG  148 (291)
Q Consensus       105 ~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~Dp~G~~iel~~~~  148 (291)
                      ++. .|.++|.++... .....| +. +-+.+|+|+.|.+...+
T Consensus        76 EIe-~LLar~~~~~~l-~kg~~g-yA-fe~vSPEgd~~llhaEd  115 (125)
T PF14506_consen   76 EIE-ALLARGAQYDRL-YKGKNG-YA-FEAVSPEGDRFLLHAED  115 (125)
T ss_dssp             HHH-HHHHC-S--SEE-EE-SSS-EE-EEEE-TT--EEEEE--S
T ss_pred             HHH-HHHhccccccee-EEcCCc-eE-EEEECCCCCEEEEEEcC
Confidence            754 445556553221 111222 21 33579999999877543

>PRK01037 trmD tRNA (guanine-N(1)-)-methyltransferase/unknown domain fusion protein; Reviewed

Probab=98.65  E-value=2.8e-07  Score=77.33  Aligned_cols=108  Identities=23%  Similarity=0.247  Sum_probs=69.3

Q ss_pred             CCceEEEeeeCChhhhHHHHHHhcCCeeeeeeccCCccceEEEeccccCCceeEEEEeeecCcceeecCcceeEEEEEec
Q 022818          152 EPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTD  231 (291)
Q Consensus       152 ~~~~~v~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~hi~~~v~  231 (291)
                      .+-.||+|.|.|+++|.+||+++|++..   ... +.  ... ++  .  .-..+-+.. .+    .....-.-+||.++
T Consensus       246 ~~~IfVNLpV~DL~rS~~FYt~LF~~n~---Fsd-e~--a~c-m~--d--tI~vMllt~-~D----~~~~~evLl~Ls~~  309 (357)
T PRK01037        246 PKTFSVVLEVQDLRRAKKFYSKMFGLEC---WDG-DK--LFL-LG--K--TSLYLQQTK-AE----KKNRGTTTLSLELE  309 (357)
T ss_pred             CceEEEEeeeCCHHHHHHHHHHHhCCCC---CCC-Cc--ccc-cc--C--cEEEEEecC-CC----CCCcceEEEEeccC
Confidence            3567999999999999999999988874   211 11  111 11  1  112222211 11    22335568999998


Q ss_pred             chHHhHHHHHHHHHHhCCeeecCCccCCCCCceEEEEECCCCceEEEee
Q 022818          232 DVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVD  280 (291)
Q Consensus       232 di~~~~~~l~~~~~~~G~~~~~~~~~~~~~~~~~~~~~DpdG~~iel~~  280 (291)
                      + .+.++++-+++.++|++...+|.++..    .--|.|||||.||++-
T Consensus       310 S-re~VD~lv~~A~aaGG~~~~~~~D~Gf----~rsf~D~DGH~WEi~~  353 (357)
T PRK01037        310 C-EHDFVRFLRRWEMLGGELGEQADGHFP----LRLVFDLDGHIWVVSC  353 (357)
T ss_pred             C-HHHHHHHHHHHHHcCCCCCCCcccccC----cceeECCCCCEEEEEE
Confidence            7 555555555559999976665555322    4458999999999984

>PRK01037 trmD tRNA (guanine-N(1)-)-methyltransferase/unknown domain fusion protein; Reviewed

Probab=98.60  E-value=4.4e-07  Score=76.19  Aligned_cols=106  Identities=23%  Similarity=0.311  Sum_probs=70.2

Q ss_pred             eeeEEEEEEeCCHHHHHHHHHhhcCCEEEEEeecCCCceeEEEEecCCCCcceEEEeeecCCCCcccCCCCceEEEEEeC
Q 022818           22 RRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIATE  101 (291)
Q Consensus        22 ~~i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~~~~i~~~v~  101 (291)
                      .+.-||.|.|+|+++|.+||+++|++.. ..    ++.  ...+  ++ .+ +.+-+... +.    ....-.-+|+.++
T Consensus       246 ~~~IfVNLpV~DL~rS~~FYt~LF~~n~-Fs----de~--a~cm--~d-tI-~vMllt~~-D~----~~~~evLl~Ls~~  309 (357)
T PRK01037        246 PKTFSVVLEVQDLRRAKKFYSKMFGLEC-WD----GDK--LFLL--GK-TS-LYLQQTKA-EK----KNRGTTTLSLELE  309 (357)
T ss_pred             CceEEEEeeeCCHHHHHHHHHHHhCCCC-CC----CCc--cccc--cC-cE-EEEEecCC-CC----CCcceEEEEeccC
Confidence            3456999999999999999999988874 22    221  1222  22 12 12222222 11    1123445688886


Q ss_pred             C---HHHHHHHHHHcCCeeecCCeecCCCceEEEEEECCCCCEEEEEeC
Q 022818          102 D---VYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQR  147 (291)
Q Consensus       102 d---~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~Dp~G~~iel~~~  147 (291)
                      +   +|++.+++.++|.+...++.+... .   --|.||||+.||++..
T Consensus       310 Sre~VD~lv~~A~aaGG~~~~~~~D~Gf-~---rsf~D~DGH~WEi~~~  354 (357)
T PRK01037        310 CEHDFVRFLRRWEMLGGELGEQADGHFP-L---RLVFDLDGHIWVVSCV  354 (357)
T ss_pred             CHHHHHHHHHHHHHcCCCCCCCcccccC-c---ceeECCCCCEEEEEEE
Confidence            4   889999999999977666666555 2   4589999999999865

>PRK10148 hypothetical protein; Provisional

Probab=98.46  E-value=2.6e-05  Score=58.83  Aligned_cols=116  Identities=15%  Similarity=0.147  Sum_probs=76.7

Q ss_pred             EEEEeC-CHHHHHHHHHhhcCCEEEEEee---c-----------------CCCceeEEEEecCCCCcceEEEeeecCCCC
Q 022818           27 AVYRVG-DLDRTIKFYTECFGMKLLRKRD---V-----------------PEEKYSNAFLGFGPEQSHFVVELTYNYGVT   85 (291)
Q Consensus        27 v~l~v~-d~~~~~~FY~~~lG~~~~~~~~---~-----------------~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~   85 (291)
                      .-|..+ +.++|++||+++||.++.....   .                 +++.+.++.+.+++.  .+++  ..... .
T Consensus         5 pyL~f~g~a~eAi~FY~~~Fgae~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~Ha~l~i~g~--~lm~--sD~~~-~   79 (147)
T PRK10148          5 PYLSFAGNCADAIAYYQQTLGAELLYKISFGEMPKSAQDSEEGCPSGMQFPDTAIAHANVRIAGS--DIMM--SDAIP-S   79 (147)
T ss_pred             EEEEeCCCHHHHHHHHHHHhCCEEEEEEEcccCCccccccccCCCccccCcCCcEEEEEEEECCE--EEEE--ECCCC-C
Confidence            345555 8999999999999998865432   1                 124455666766542  2222  22111 1


Q ss_pred             cccCCCCceEEEEEeCCHHH---HHHHHHHcCCeeecCCeecCCCceEEEEEECCCCCEEEEEeCCCC
Q 022818           86 SYDIGTGFGHFAIATEDVYK---LVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRGPT  150 (291)
Q Consensus        86 ~~~~g~~~~~i~~~v~d~~~---~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~Dp~G~~iel~~~~~~  150 (291)
                      ....+ .-.++++.++|.++   ++++| +.|.++..++.+.+||.+. ..++||.|+.|.|......
T Consensus        80 ~~~~~-~~~~l~l~~~d~ee~~~~~~aL-a~gg~v~mpl~~~~wg~~~-g~v~D~fGi~W~l~~~~~~  144 (147)
T PRK10148         80 GKAHY-SGFTLVLDTQDVEEGKRWFDNL-AANGKIEMAWQETFWAHGF-GKVTDKFGVPWMINVVKQQ  144 (147)
T ss_pred             cCCCC-CeEEEEEECCCHHHHHHHHHHh-hCCCEEEecchhcchhhcc-EEEECCCCCEEEEEecCCC
Confidence            11111 24567788888776   55655 6889999999999998764 8899999999999876543

>PF14506 CppA_N: CppA N-terminal; PDB: 3E0R_D

Probab=98.45  E-value=9.5e-06  Score=57.02  Aligned_cols=113  Identities=28%  Similarity=0.419  Sum_probs=63.6

Q ss_pred             EEEeeeCChhhhHHHHHHhcCCeeeeeeccCCccceEEEeccccCCceeEEEEeeecCcce-eecC-cceeEEEEEecch
Q 022818          156 QVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTE-YTKG-NAYAQVAISTDDV  233 (291)
Q Consensus       156 ~v~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~-~~~~-~~~~hi~~~v~di  233 (291)
                      +-.|.|.|-+..++||++.|||++..+..      .+++++...+.....||-+.  .... .-.| --+.++.+.|++ 
T Consensus         3 ~PvlRVnnR~~ni~FY~~~LGfkll~EEn------a~a~lg~~~~~erlvlEESP--~~rtr~V~G~KKl~~ivIkv~~-   73 (125)
T PF14506_consen    3 IPVLRVNNRDLNIDFYQKTLGFKLLSEEN------ALAILGDQQKEERLVLEESP--SMRTRAVEGPKKLNRIVIKVPN-   73 (125)
T ss_dssp             EEEEEESSHHHHHHHHTTTT--EEEEEET------TEEEEE-TT--EEEEEEE----TTT-B--SSS-SEEEEEEEESS-
T ss_pred             CceEEEcCHHHhHHHHHhccCcEEeeccc------cEEEecCCCCceEEEEecCC--ccccccccCcceeeEEEEEcCC-
Confidence            45789999999999999999999886643      55666643433344444322  1111 1122 267899999998 


Q ss_pred             HHhHHHHHHHHHHhCCeeecCCccCCCCCceEEEEECCCCceEEEeechhh
Q 022818          234 YKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNEDF  284 (291)
Q Consensus       234 ~~~~~~l~~~~~~~G~~~~~~~~~~~~~~~~~~~~~DpdG~~iel~~~~~~  284 (291)
                      ....++|    .++|.++...-.   +..+..+-..+|+|++|.+....+.
T Consensus        74 ~~EIe~L----Lar~~~~~~l~k---g~~gyAfe~vSPEgd~~llhaEdd~  117 (125)
T PF14506_consen   74 PKEIEAL----LARGAQYDRLYK---GKNGYAFEAVSPEGDRFLLHAEDDI  117 (125)
T ss_dssp             HHHHHHH----HHC-S--SEEEE----SSSEEEEEE-TT--EEEEE--S-G
T ss_pred             HHHHHHH----HhcccccceeEE---cCCceEEEEECCCCCEEEEEEcCCH
Confidence            6667777    777766422212   2234666688999999999877653

>PRK10148 hypothetical protein; Provisional

Probab=98.44  E-value=8.4e-06  Score=61.53  Aligned_cols=116  Identities=16%  Similarity=0.112  Sum_probs=71.4

Q ss_pred             Eeee-CChhhhHHHHHHhcCCeeeeeecc---C-----------------CccceEEEeccccCCceeEEEEeeecCcce
Q 022818          158 MLRV-GDLGRSIKFYEKALGMKLLRTVDK---P-----------------EYKYTLAMLGYAEEDQTTVLELTYNYGVTE  216 (291)
Q Consensus       158 ~l~v-~d~~~~~~fy~~~lG~~~~~~~~~---~-----------------~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~  216 (291)
                      -|.. .|.+++++||+++||.++......   +                 ++......+..+    +..|.+....+.. 
T Consensus         6 yL~f~g~a~eAi~FY~~~Fgae~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~Ha~l~i~----g~~lm~sD~~~~~-   80 (147)
T PRK10148          6 YLSFAGNCADAIAYYQQTLGAELLYKISFGEMPKSAQDSEEGCPSGMQFPDTAIAHANVRIA----GSDIMMSDAIPSG-   80 (147)
T ss_pred             EEEeCCCHHHHHHHHHHHhCCEEEEEEEcccCCccccccccCCCccccCcCCcEEEEEEEEC----CEEEEEECCCCCc-
Confidence            4556 489999999999999887644321   0                 112222222221    1223222211111 


Q ss_pred             eecCcceeEEEEEecchHHhHHHHHHHHHHhCCeeecCCccCCCCCceEEEEECCCCceEEEeech
Q 022818          217 YTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNE  282 (291)
Q Consensus       217 ~~~~~~~~hi~~~v~di~~~~~~l~~~~~~~G~~~~~~~~~~~~~~~~~~~~~DpdG~~iel~~~~  282 (291)
                      ...+ ...++++.++|.+++ +++.++ .+.|+++..++...++ +.++..++||.|+.|.|...+
T Consensus        81 ~~~~-~~~~l~l~~~d~ee~-~~~~~a-La~gg~v~mpl~~~~w-g~~~g~v~D~fGi~W~l~~~~  142 (147)
T PRK10148         81 KAHY-SGFTLVLDTQDVEEG-KRWFDN-LAANGKIEMAWQETFW-AHGFGKVTDKFGVPWMINVVK  142 (147)
T ss_pred             CCCC-CeEEEEEECCCHHHH-HHHHHH-hhCCCEEEecchhcch-hhccEEEECCCCCEEEEEecC
Confidence            1111 246788888886553 333333 3699999999999888 568999999999999997653

>COG3185 4-hydroxyphenylpyruvate dioxygenase and related hemolysins [Amino acid transport and metabolism / General function prediction only]

Probab=98.24  E-value=4.9e-06  Score=69.42  Aligned_cols=102  Identities=22%  Similarity=0.316  Sum_probs=74.2

Q ss_pred             CcceeeEEEEEEeC--CHHHHHHHHHhhcCCEEEEEeecCCC--ceeEEEEecCCCCcceEEEeeecCCCCc----c---
Q 022818           19 KDKRRFLHAVYRVG--DLDRTIKFYTECFGMKLLRKRDVPEE--KYSNAFLGFGPEQSHFVVELTYNYGVTS----Y---   87 (291)
Q Consensus        19 ~~~~~i~hv~l~v~--d~~~~~~FY~~~lG~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~~~~~~~~~~----~---   87 (291)
                      ..+..|+|++..|.  .++....||+++|+|+.....+.++.  ..+.-.+....+.  +.+.+.......+    +   
T Consensus       163 ~g~~~IDHl~~nv~~~~md~w~~FY~~if~~~~~~~fdi~~p~tgl~Sram~Sp~G~--vrlplN~s~~~~sqi~efl~~  240 (363)
T COG3185         163 VGLTAIDHLTHNVKAGQMDTWVLFYESLFGFREIQYFDIPGPITGLRSRAMVSPCGK--VRLPLNESADDKSQIGEFLRE  240 (363)
T ss_pred             cCceeechhhhhcchhhHHHHHHHHHHHhCccceeeEeccCCcccEEEeeEecCCCc--EEeecccCCCchhHHHHHHHH
Confidence            34679999999887  89999999999999999987776553  3333334333333  3444433322222    1   


Q ss_pred             cCCCCceEEEEEeCCHHHHHHHHHHcCCeeecCCe
Q 022818           88 DIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPG  122 (291)
Q Consensus        88 ~~g~~~~~i~~~v~d~~~~~~~l~~~G~~~~~~~~  122 (291)
                      ..|.|+.||+|.++|+-+..++++++|++....|.
T Consensus       241 y~G~GIQHIA~~T~dI~~tv~~lr~rG~~fl~ip~  275 (363)
T COG3185         241 YRGEGIQHIAFGTDDIYATVAALRERGVKFLPIPE  275 (363)
T ss_pred             hCCCcceEEEecccHHHHHHHHHHHcCCccCCCch
Confidence            26889999999999999999999999999876654

>PF14696 Glyoxalase_5: Hydroxyphenylpyruvate dioxygenase, HPPD, N-terminal ; PDB: 1CJX_A 2R5V_A

Probab=98.14  E-value=5.6e-05  Score=55.90  Aligned_cols=117  Identities=19%  Similarity=0.173  Sum_probs=76.3

Q ss_pred             CceEEEeeeCChhhhHHHHHHhcCCeeeeeeccCCccceEEEeccccCCceeEEEEeeecCcce----eecCcceeEEEE
Q 022818          153 PLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTE----YTKGNAYAQVAI  228 (291)
Q Consensus       153 ~~~~v~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~----~~~~~~~~hi~~  228 (291)
                      .+.+|.+.+++.++...+++ .|||+.+.....-+  ..++..+      ...+.+....+...    ...|++.--++|
T Consensus         9 G~dFvEFa~~~~~~l~~~~~-~lGF~~~a~hrsk~--v~l~rQG------~I~~vln~ep~s~a~~~~~~HG~sv~aiaf   79 (139)
T PF14696_consen    9 GFDFVEFAVPDAQALAQLFT-ALGFQPVARHRSKD--VTLYRQG------DINFVLNSEPDSFAAEFAAQHGPSVCAIAF   79 (139)
T ss_dssp             EEEEEEEE-SSTTSCHHHHC-CCCEEEECCECCCS--EEEEEET------TEEEEEEEESTSCHHHHHHHHSSEEEEEEE
T ss_pred             CeEEEEEecCCHHHHHHHHH-HhCcceEEecCCcc--eEEEEeC------CEEEEEeCCCcchHHHHHHhcCCEEEEEEE
Confidence            57899999999888888885 59999887654322  2333222      34444433222111    236889999999


Q ss_pred             EecchHHhHHHHHHHHHHhCCeeecCCccCCCCCceEEEEECCCCceEEEeechhh
Q 022818          229 STDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNEDF  284 (291)
Q Consensus       229 ~v~di~~~~~~l~~~~~~~G~~~~~~~~~~~~~~~~~~~~~DpdG~~iel~~~~~~  284 (291)
                      .|+|..+++++.    .++|.+.+..|....  ...+--++-++|.++-|+++...
T Consensus        80 rV~Da~~A~~rA----~~~GA~~~~~~~~~~--e~~~paI~g~G~sl~yfVdr~~~  129 (139)
T PF14696_consen   80 RVDDAAAAYERA----VALGAEPVQEPTGPG--ELNIPAIRGIGGSLHYFVDRYGD  129 (139)
T ss_dssp             EES-HHHHHHHH----HHTT--EEEEEEETT---BEEEEEE-CCC-EEEEEE--SS
T ss_pred             EeCCHHHHHHHH----HHcCCcCcccCCCCC--cEeeeeEEccCCCEEEEEecCCC
Confidence            999999999999    999999887764322  24677899999999999998654

>PF13468 Glyoxalase_3: Glyoxalase-like domain; PDB: 3P8A_B

Probab=97.89  E-value=6.6e-05  Score=58.61  Aligned_cols=87  Identities=23%  Similarity=0.311  Sum_probs=50.7

Q ss_pred             ceEEEeeeCChhhhHHHHHHhcCCeeeeeeccCCc--cceEEEeccccCCceeEEEEeeecCccee------------ec
Q 022818          154 LCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEY--KYTLAMLGYAEEDQTTVLELTYNYGVTEY------------TK  219 (291)
Q Consensus       154 ~~~v~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~l~~~~~~~~~------------~~  219 (291)
                      |+|+.+.|+|++++.++|++.|||.+.....-+..  .-.++.++  +   . .||+....+....            ..
T Consensus         1 lDH~v~~v~dl~~a~~~~~~~lGf~~~~gg~h~~~GT~N~li~f~--~---~-YlEli~i~~~~~~~~~~~~~~~~~~~~   74 (175)
T PF13468_consen    1 LDHLVIAVRDLDAAVERFEQRLGFTVTPGGEHPGWGTANALIPFG--D---G-YLELIAIDPEAPAPDRGRWFGLDRLAG   74 (175)
T ss_dssp             EEEEEEE-TTGGG----GGGS--S--EEEEE-TTT-EEEEEEE-S--S---S-EEEEEEES-HHHSTGGGT-TTTHHHHT
T ss_pred             CCEEEEEcCCHHHHHHhhhhcceEeecCCCcCCCCccEEEEEeeC--C---c-eEEEEEeCCcccccccccceechhhcC
Confidence            68999999999999999988899998876554432  22445554  2   3 6777664322211            13


Q ss_pred             CcceeEEEEEecchHHhHHHHHHHHHHhCCe
Q 022818          220 GNAYAQVAISTDDVYKSAEVVNLVTQELGGK  250 (291)
Q Consensus       220 ~~~~~hi~~~v~di~~~~~~l~~~~~~~G~~  250 (291)
                      +.|+.+++|.++|+++..+++    ++.|+.
T Consensus        75 ~~g~~~~~l~t~d~~~~~~~l----~~~G~~  101 (175)
T PF13468_consen   75 GEGLYGWALRTDDIEAVAARL----RAAGLD  101 (175)
T ss_dssp             --EEEEEEEE-S-HHHHHHHH----HTTT-E
T ss_pred             CCCeEEEEEecCCHHHHHHHH----HhcCCC
Confidence            568999999999999999999    899975

>PF06983 3-dmu-9_3-mt: 3-demethylubiquinone-9 3-methyltransferase; PDB: 1U7I_A 1TSJ_A 1U69_D 3L20_B 3OMS_A

Probab=96.95  E-value=0.038  Score=39.83  Aligned_cols=99  Identities=21%  Similarity=0.226  Sum_probs=52.7

Q ss_pred             CChhhhHHHHHHhcCCeeeee-eccCCc------cceEEEeccccCCceeEEEEeeecCcceeecCcceeEEEEEecchH
Q 022818          162 GDLGRSIKFYEKALGMKLLRT-VDKPEY------KYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDVY  234 (291)
Q Consensus       162 ~d~~~~~~fy~~~lG~~~~~~-~~~~~~------~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~hi~~~v~di~  234 (291)
                      .+.++|.+||.++||-..... ...++.      ......+..+    +..+-.....  .....+++ ..+++.++| .
T Consensus        11 g~a~eA~~fY~~vf~~~~i~~~~~~~~~~~~~~~~v~ha~l~i~----g~~lm~~D~~--~~~~~~~~-~sl~i~~~~-~   82 (116)
T PF06983_consen   11 GNAEEALEFYKEVFGGSEIMTFGDYPDDEPEWKDKVMHAELTIG----GQKLMASDGG--PDFPFGNN-ISLCIECDD-E   82 (116)
T ss_dssp             S-HHHHHHHHHHHSTTEEEEEEEE-TTTCTTHTTSEEEEEEEET----TEEEEEEEES--TS----TT-EEEEEEESS-H
T ss_pred             CCHHHHHHHHHHHcCCCEEEEEeECCCCCCCCCCcEEEEEEEEC----CeEEEEECCC--CCCCCCCc-EEEEEEcCC-H
Confidence            789999999999999533222 222211      1111122211    1222221111  12223333 678888988 5


Q ss_pred             HhHHHHHHHHHHhCCeeecCCccCCCCCceEEEEECCCCceEEEe
Q 022818          235 KSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLV  279 (291)
Q Consensus       235 ~~~~~l~~~~~~~G~~~~~~~~~~~~~~~~~~~~~DpdG~~iel~  279 (291)
                      +.++++.++|.+.|-          +. .++..++|..|..|.|+
T Consensus        83 ee~~~~f~~Ls~gG~----------~~-~~~G~v~DkFGv~Wqiv  116 (116)
T PF06983_consen   83 EEIDRIFDKLSEGGQ----------WF-SRYGWVTDKFGVSWQIV  116 (116)
T ss_dssp             HHHHHHHHHHHTTTE----------TC-CEEEEEE-TTS-EEEEE
T ss_pred             HHHHHHHHHHHcCCC----------cc-ceeEEEEeCCCCEEEeC
Confidence            566666666576654          22 38899999999999885

>PF06983 3-dmu-9_3-mt: 3-demethylubiquinone-9 3-methyltransferase; PDB: 1U7I_A 1TSJ_A 1U69_D 3L20_B 3OMS_A

Probab=96.56  E-value=0.16  Score=36.54  Aligned_cols=96  Identities=20%  Similarity=0.404  Sum_probs=54.1

Q ss_pred             CCHHHHHHHHHhhcCCEEE-EEeecCC------CceeEEEEecCCCCcceEEEeeecCCCCcccCCCCceEEEEEeCC--
Q 022818           32 GDLDRTIKFYTECFGMKLL-RKRDVPE------EKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIATED--  102 (291)
Q Consensus        32 ~d~~~~~~FY~~~lG~~~~-~~~~~~~------~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~~~~i~~~v~d--  102 (291)
                      .+.++|.+||+++||-..+ .....++      +...++.+.+++.  .++.  ....  ..+..+ ....+++.++|  
T Consensus        11 g~a~eA~~fY~~vf~~~~i~~~~~~~~~~~~~~~~v~ha~l~i~g~--~lm~--~D~~--~~~~~~-~~~sl~i~~~~~e   83 (116)
T PF06983_consen   11 GNAEEALEFYKEVFGGSEIMTFGDYPDDEPEWKDKVMHAELTIGGQ--KLMA--SDGG--PDFPFG-NNISLCIECDDEE   83 (116)
T ss_dssp             S-HHHHHHHHHHHSTTEEEEEEEE-TTTCTTHTTSEEEEEEEETTE--EEEE--EEES--TS-----TTEEEEEEESSHH
T ss_pred             CCHHHHHHHHHHHcCCCEEEEEeECCCCCCCCCCcEEEEEEEECCe--EEEE--ECCC--CCCCCC-CcEEEEEEcCCHH
Confidence            6899999999999995333 3333332      2444555665432  2222  1111  122223 23577888877  


Q ss_pred             -HHHHHHHHHHcCCeeecCCeecCCCceEEEEEECCCCCEEEEE
Q 022818          103 -VYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELI  145 (291)
Q Consensus       103 -~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~Dp~G~~iel~  145 (291)
                       +++++++|.+.|-          +.. .+..+.|.-|..|.++
T Consensus        84 e~~~~f~~Ls~gG~----------~~~-~~G~v~DkFGv~Wqiv  116 (116)
T PF06983_consen   84 EIDRIFDKLSEGGQ----------WFS-RYGWVTDKFGVSWQIV  116 (116)
T ss_dssp             HHHHHHHHHHTTTE----------TCC-EEEEEE-TTS-EEEEE
T ss_pred             HHHHHHHHHHcCCC----------ccc-eeEEEEeCCCCEEEeC
Confidence             5566788888774          223 4588999999988774

>PF15067 FAM124: FAM124 family

Probab=95.90  E-value=0.11  Score=41.56  Aligned_cols=104  Identities=15%  Similarity=0.213  Sum_probs=59.9

Q ss_pred             eeEEEEEEeC--CHHHHHHHHHhhcCCEEEEEeecCCCceeEEEEe-cCCCCcceEEEeeec-CCCCcccCCCCceEEEE
Q 022818           23 RFLHAVYRVG--DLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLG-FGPEQSHFVVELTYN-YGVTSYDIGTGFGHFAI   98 (291)
Q Consensus        23 ~i~hv~l~v~--d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~~~-~~~~~~~~g~~~~~i~~   98 (291)
                      -+-.+.|.|+  |.+.+++||+-+|+-+......  +    .-++. +......+.+.+..- .+..+.  ...-.-+.|
T Consensus       128 EilRftly~~~~N~~d~vr~Yelil~~~~~~~k~--~----FC~F~lys~~~~~iQlsLK~lp~~~~p~--p~esavLqF  199 (236)
T PF15067_consen  128 EILRFTLYCSFDNYEDMVRFYELILQREPTQQKE--D----FCFFTLYSQPGLDIQLSLKQLPPGMSPE--PTESAVLQF  199 (236)
T ss_pred             cEEEEEEEecCCCHHHHHHHHHHHhccCcceeeC--C----cEEEEEecCCCeEEEEEeccCCCCCCcc--cccceEEEE
Confidence            4557889999  9999999999999998865432  1    22222 222223333333222 111111  112345789


Q ss_pred             EeCCHHHHHHHHHHcCCeeecCCeecCCCceEEEEEECCCCCEEEE
Q 022818           99 ATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFEL  144 (291)
Q Consensus        99 ~v~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~Dp~G~~iel  144 (291)
                      .|.|+.++...|-.--..+         +..+ .-..|||||.|-|
T Consensus       200 ~V~~igqLvpLLPnpc~PI---------S~~r-WqT~D~DGNkILL  235 (236)
T PF15067_consen  200 RVEDIGQLVPLLPNPCSPI---------SETR-WQTEDYDGNKILL  235 (236)
T ss_pred             EecchhhhcccCCCCcccc---------cCCc-ceeeCCCCCEecc
Confidence            9999987665543221111         1222 4579999999854

>PF15067 FAM124: FAM124 family

Probab=95.20  E-value=0.6  Score=37.44  Aligned_cols=125  Identities=16%  Similarity=0.181  Sum_probs=68.1

Q ss_pred             EEEECCCCCEEEEEeCCCCCCCceEEEeeeC--ChhhhHHHHHHhcCCeeeeeeccCCccceEEEeccccCCceeEEEEe
Q 022818          132 AFVKDPDGYIFELIQRGPTPEPLCQVMLRVG--DLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELT  209 (291)
Q Consensus       132 ~~~~Dp~G~~iel~~~~~~~~~~~~v~l~v~--d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~  209 (291)
                      +|-.+|.=-+|.+-+-. -...+.-++|.|+  |.+.+++||+-+|+-+.....  .+  +-++.+ +...  +..+.+.
T Consensus       108 fysl~~~~PlWavr~VH-~G~EilRftly~~~~N~~d~vr~Yelil~~~~~~~k--~~--FC~F~l-ys~~--~~~iQls  179 (236)
T PF15067_consen  108 FYSLDPGMPLWAVRQVH-YGKEILRFTLYCSFDNYEDMVRFYELILQREPTQQK--ED--FCFFTL-YSQP--GLDIQLS  179 (236)
T ss_pred             ceecCCCCceeEEeeee-ccccEEEEEEEecCCCHHHHHHHHHHHhccCcceee--CC--cEEEEE-ecCC--CeEEEEE
Confidence            33445544444443322 2235778899998  999999999999998764332  22  222222 2232  3344443


Q ss_pred             eecCcc-eeecCcceeEEEEEecchHHhHHHHHHHHHHhCCeeecCCccCCCCCceEEEEECCCCceEEE
Q 022818          210 YNYGVT-EYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVL  278 (291)
Q Consensus       210 ~~~~~~-~~~~~~~~~hi~~~v~di~~~~~~l~~~~~~~G~~~~~~~~~~~~~~~~~~~~~DpdG~~iel  278 (291)
                      ...-+. -.+.+....-+.|.|.|+-+++.-|     -+...        |...++ -...|||||.|-|
T Consensus       180 LK~lp~~~~p~p~esavLqF~V~~igqLvpLL-----Pnpc~--------PIS~~r-WqT~D~DGNkILL  235 (236)
T PF15067_consen  180 LKQLPPGMSPEPTESAVLQFRVEDIGQLVPLL-----PNPCS--------PISETR-WQTEDYDGNKILL  235 (236)
T ss_pred             eccCCCCCCcccccceEEEEEecchhhhcccC-----CCCcc--------cccCCc-ceeeCCCCCEecc
Confidence            321111 1122234467899999987777666     12221        111123 2378999999854

>PF14507 CppA_C: CppA C-terminal; PDB: 3E0R_D

Probab=94.94  E-value=0.096  Score=36.26  Aligned_cols=92  Identities=16%  Similarity=0.155  Sum_probs=38.7

Q ss_pred             ceEEEeeeCChhhhHHHHHHhcCCeeeeeeccCCccceEEEeccccCCceeEEEEeeecCcceeecCcceeEEEEEec-c
Q 022818          154 LCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTD-D  232 (291)
Q Consensus       154 ~~~v~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~hi~~~v~-d  232 (291)
                      +..+.|+|+| +++..||+++||-...         ..+.+....++  ...++-         ...=+.-.+-|.|+ +
T Consensus         6 ~e~i~LNV~d-~~~~~fy~~~f~~~~~---------~~l~f~ea~G~--DL~~~~---------~~twDLe~Lkf~V~~~   64 (101)
T PF14507_consen    6 FESIELNVPD-AKSQSFYQSIFGGQLP---------FFLTFQEAQGP--DLTIEN---------NETWDLEMLKFQVPKD   64 (101)
T ss_dssp             E-EEEEEE-T--T---S--H---HHHT---------TTEEEEE---C--CGSS-T---------TSBSSEEEEEEEES-S
T ss_pred             EEEEEEeCCC-hhHHHHHHhccccCCC---------ceEEEeeccCC--ccccCC---------CcEEeeEEEEEEecCc
Confidence            5578999999 8899999998873211         12222211000  000000         00115567888998 3


Q ss_pred             --hHHhHHHHHHHHHHhCCeeecCCccCCCCCceEEEEECCCCceEEE
Q 022818          233 --VYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVL  278 (291)
Q Consensus       233 --i~~~~~~l~~~~~~~G~~~~~~~~~~~~~~~~~~~~~DpdG~~iel  278 (291)
                        +.+...++    .+.++-   -++     ..+++.+.||.|..|.|
T Consensus        65 ~Dl~~L~~~l----e~~~~f---idK-----k~k~l~~~Dps~IElWF  100 (101)
T PF14507_consen   65 FDLAALKSHL----EEQEFF---IDK-----KEKFLVTSDPSQIELWF  100 (101)
T ss_dssp             --HHHHHHHT----TTS-EE-----T-----T-SEEEEE-TTS-EEEE
T ss_pred             ccHHHHHHHh----cccceE---ecC-----CceEEEEECCcceEEEe
Confidence              44444444    653321   122     24789999999998876

>PF14507 CppA_C: CppA C-terminal; PDB: 3E0R_D

Probab=94.53  E-value=0.13  Score=35.56  Aligned_cols=93  Identities=15%  Similarity=0.232  Sum_probs=39.0

Q ss_pred             eeEEEEEEeCCHHHHHHHHHhhcCCEEEEEeecCCCceeEEEEecCCCCcceEEEeeecCCCCcccCCCCceEEEEEeC-
Q 022818           23 RFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIATE-  101 (291)
Q Consensus        23 ~i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~~~~i~~~v~-  101 (291)
                      .+..+.|.|+| +++.+||+++||-..      +   ..+.+-.. .+ ..+.+         .....-.+.-+-|.|+ 
T Consensus         5 ~~e~i~LNV~d-~~~~~fy~~~f~~~~------~---~~l~f~ea-~G-~DL~~---------~~~~twDLe~Lkf~V~~   63 (101)
T PF14507_consen    5 EFESIELNVPD-AKSQSFYQSIFGGQL------P---FFLTFQEA-QG-PDLTI---------ENNETWDLEMLKFQVPK   63 (101)
T ss_dssp             EE-EEEEEE-T--T---S--H---HHH------T---TTEEEEE-----CCGSS----------TTSBSSEEEEEEEES-
T ss_pred             EEEEEEEeCCC-hhHHHHHHhccccCC------C---ceEEEeec-cC-Ccccc---------CCCcEEeeEEEEEEecC
Confidence            35689999999 889999999886211      0   01111110 00 00100         0001124556678887 


Q ss_pred             --CHHHHHHHHHHcCCeeecCCeecCCCceEEEEEECCCCCEEEE
Q 022818          102 --DVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFEL  144 (291)
Q Consensus       102 --d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~Dp~G~~iel  144 (291)
                        |+.++.+++.+.+.=+.        -+..++.+.||++..+-|
T Consensus        64 ~~Dl~~L~~~le~~~~fid--------Kk~k~l~~~Dps~IElWF  100 (101)
T PF14507_consen   64 DFDLAALKSHLEEQEFFID--------KKEKFLVTSDPSQIELWF  100 (101)
T ss_dssp             S--HHHHHHHTTTS-EE----------TT-SEEEEE-TTS-EEEE
T ss_pred             cccHHHHHHHhcccceEec--------CCceEEEEECCcceEEEe
Confidence              57788888888543211        122357789999966543

>COG3865 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=86.38  E-value=11  Score=27.90  Aligned_cols=46  Identities=15%  Similarity=0.124  Sum_probs=33.7

Q ss_pred             eEEEEEecchHHhHHHHHHHHHHhCCeeecCCccCCCCCceEEEEECCCCceEEEeec
Q 022818          224 AQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDN  281 (291)
Q Consensus       224 ~hi~~~v~di~~~~~~l~~~~~~~G~~~~~~~~~~~~~~~~~~~~~DpdG~~iel~~~  281 (291)
                      ..+-+.++| .+..++++.+|.+.|.+-           ....+++|-.|.-|.|+-+
T Consensus        79 ~S~~v~~~~-q~E~Drlwnal~~~g~e~-----------~~cgW~kDKfGVSWQi~p~  124 (151)
T COG3865          79 FSFQVACDD-QEEIDRLWNALSDNGGEA-----------EACGWLKDKFGVSWQIVPR  124 (151)
T ss_pred             EEEEEEcCC-HHHHHHHHHHHhccCcch-----------hcceeEecccCcEEEEcHH
Confidence            345555667 777788877779888621           3678899999999999643

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	291
1f9z_A	135	Crystal Structure Of The Ni(Ii)-Bound Glyoxalase I		4e-39
1f9z_A	135	Crystal Structure Of The Ni(Ii)-Bound Glyoxalase I		2e-29
2c21_A	144	Specificity Of The Trypanothione-Dependednt Leishma		7e-32
2c21_A	144	Specificity Of The Trypanothione-Dependednt Leishma		3e-21
3zi1_A	330	Crystal Structure Of Human Glyoxalase Domain-contai		2e-24
2za0_A	184	Crystal Structure Of Mouse Glyoxalase I Complexed W		6e-12
2za0_A	184	Crystal Structure Of Mouse Glyoxalase I Complexed W		1e-11
1fro_A	183	Human Glyoxalase I With Benzyl-Glutathione Inhibito		1e-11
1fro_A	183	Human Glyoxalase I With Benzyl-Glutathione Inhibito		4e-11
3vw9_A	187	Human Glyoxalase I With An N-Hydroxypyridone Inhibi		1e-11
3vw9_A	187	Human Glyoxalase I With An N-Hydroxypyridone Inhibi		2e-11
1bh5_A	183	Human Glyoxalase I Q33e, E172q Double Mutant Length		3e-11
1bh5_A	183	Human Glyoxalase I Q33e, E172q Double Mutant Length		9e-11
3bqx_A	150	High Resolution Crystal Structure Of A Glyoxalase-R		5e-04

>pdb|1F9Z|A Chain A, Crystal Structure Of The Ni(Ii)-Bound Glyoxalase I From Escherichia Coli Length = 135

Iteration: 1
 Score =  158 bits (399), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 73/124 (58%), Positives = 92/124 (74%)
Query: 23  RFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNY 82
           R LH + RVGDL R+I FYT+  GMKLLR  + PE KYS AF+G+GPE    V+ELTYN+
Sbjct: 2   RLLHTMLRVGDLQRSIDFYTKVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNW 61
Query: 83  GVTSYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIF 142
           GV  Y++GT +GH A++ ++  +  E IR  GGNVTRE GP+KGGTT IAFV+DPDGY  
Sbjct: 62  GVDKYELGTAYGHIALSVDNAAEACEKIRQNGGNVTREAGPVKGGTTVIAFVEDPDGYKI 121
Query: 143 ELIQ 146
           ELI+
Sbjct: 122 ELIE 125

>pdb|1F9Z|A Chain A, Crystal Structure Of The Ni(Ii)-Bound Glyoxalase I From Escherichia Coli Length = 135

Iteration: 1
 Score =  125 bits (315), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 63/130 (48%), Positives = 85/130 (65%), Gaps = 4/130 (3%)
Query: 154 LCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYG 213
           L   MLRVGDL RSI FY K LGMKLLRT + PEYKY+LA +GY  E +  V+ELTYN+G
Sbjct: 3   LLHTMLRVGDLQRSIDFYTKVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNWG 62
Query: 214 VTEYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDG 273
           V +Y  G AY  +A+S D+  ++ E +    ++ GG +TR+ G + G  T I    DPDG
Sbjct: 63  VDKYELGTAYGHIALSVDNAAEACEKI----RQNGGNVTREAGPVKGGTTVIAFVEDPDG 118
Query: 274 WKTVLVDNED 283
           +K  L++ +D
Sbjct: 119 YKIELIEEKD 128

>pdb|2C21|A Chain A, Specificity Of The Trypanothione-Dependednt Leishmania Major Glyoxalase I: Structure And Biochemical Comparison With The Human Enzyme Length = 144

Iteration: 1
 Score =  134 bits (337), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 69/125 (55%), Positives = 84/125 (67%), Gaps = 5/125 (4%)
Query: 22  RRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYN 81
           RR LH + RVGDLDR+IKFYTE  GMK+LRK DVPE+KY+  FLG+GPE S  V+ELTYN
Sbjct: 7   RRMLHTMIRVGDLDRSIKFYTERLGMKVLRKWDVPEDKYTLVFLGYGPEMSSTVLELTYN 66
Query: 82  YGVTSYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYI 141
           YGVTSY     +GH AI  EDV +LV ++R         P   +  +  +AFV DPDGY 
Sbjct: 67  YGVTSYKHDEAYGHIAIGVEDVKELVADMRKHD-----VPIDYEDESGFMAFVVDPDGYY 121
Query: 142 FELIQ 146
            EL+ 
Sbjct: 122 IELLN 126

>pdb|2C21|A Chain A, Specificity Of The Trypanothione-Dependednt Leishmania Major Glyoxalase I: Structure And Biochemical Comparison With The Human Enzyme Length = 144

Iteration: 1
 Score = 99.0 bits (245), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 57/140 (40%), Positives = 79/140 (56%), Gaps = 13/140 (9%)
Query: 154 LCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYG 213
           +   M+RVGDL RSIKFY + LGMK+LR  D PE KYTL  LGY  E  +TVLELTYNYG
Sbjct: 9   MLHTMIRVGDLDRSIKFYTERLGMKVLRKWDVPEDKYTLVFLGYGPEMSSTVLELTYNYG 68
Query: 214 VTEYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQ--PGSIPGLNTKITSFVDP 271
           VT Y    AY  +AI  +DV           +EL   + +   P      +  +   VDP
Sbjct: 69  VTSYKHDEAYGHIAIGVEDV-----------KELVADMRKHDVPIDYEDESGFMAFVVDP 117
Query: 272 DGWKTVLVDNEDFLKELQSE 291
           DG+   L++ +  +++ +++
Sbjct: 118 DGYYIELLNEKTMMEKAEAD 137

>pdb|3ZI1|A Chain A, Crystal Structure Of Human Glyoxalase Domain-containing Protein 4 (glod4) Length = 330

Iteration: 1
 Score =  109 bits (272), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 89/286 (31%), Positives = 131/286 (45%), Gaps = 51/286 (17%)
Query: 22  RRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEE-----------KYSNAFLGFGPE 70
           RR LH V++VG+  +T +FY +  GMK+LR  +  E            K+S   +GFGPE
Sbjct: 26  RRALHFVFKVGNRFQTARFYRDVLGMKVLRHEEFEEGCKAACNGPYDGKWSKTMVGFGPE 85
Query: 71  QSHFVVELTYNYGVTSYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTH 130
             HFV ELTYNYGV  Y +G  F    +A+    + V N R       +   PL      
Sbjct: 86  DDHFVAELTYNYGVGDYKLGNDFMGITLASS---QAVSNAR-------KLEWPLTEVAEG 135
Query: 131 IAFVKDPDGYIFELIQRG-PTPEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYK 189
           +   + P GY F L  R  P  +P+ +V L V DL +S+ ++   LGMK+    ++ +  
Sbjct: 136 VFETEAPGGYKFYLQNRSLPQSDPVLKVTLAVSDLQKSLNYWCNLLGMKIYENDEEKQR- 194
Query: 190 YTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAIST--------DDVYKSAE--- 238
              A+LGYA  D    LEL    G  ++    A+ ++A S         +D+ K      
Sbjct: 195 ---ALLGYA--DNQCKLELQGVKGGVDHAA--AFGRIAFSCPQKELPDLEDLMKRENQKI 247
Query: 239 VVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNEDF 284
           +  LV+ +  GK T Q          +    DPDG +   V +E F
Sbjct: 248 LTPLVSLDTPGKATVQ----------VVILADPDGHEICFVGDEAF 283

>pdb|2ZA0|A Chain A, Crystal Structure Of Mouse Glyoxalase I Complexed With Methyl-Gerfelin Length = 184

Iteration: 1
 Score = 68.2 bits (165), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 49/158 (31%), Positives = 74/158 (46%), Gaps = 32/158 (20%)
Query: 17  PKKDKRRFL--HAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGF------- 67
           P    + FL    + R+ D  +++ FYT   G+ LL+K D P  K+S  FL +       
Sbjct: 23  PDPSTKDFLLQQTMLRIKDPKKSLDFYTRVLGLTLLQKLDFPAMKFSLYFLAYEDKNDIP 82
Query: 68  --GPEQSHF------VVELTYNYG-----VTSYDIGT----GFGHFAIATEDVYKLVENI 110
               E++ +       +ELT+N+G       SY  G     GFGH  IA  DVY   +  
Sbjct: 83  KDKSEKTAWTFSRKATLELTHNWGTEDDETQSYHNGNSDPRGFGHIGIAVPDVYSACKRF 142
Query: 111 RAKGGNVTREP--GPLKGGTTHIAFVKDPDGYIFELIQ 146
              G    ++P  G +KG    +AF++DPDGY  E++ 
Sbjct: 143 EELGVKFVKKPDDGKMKG----LAFIQDPDGYWIEILN 176

>pdb|2ZA0|A Chain A, Crystal Structure Of Mouse Glyoxalase I Complexed With Methyl-Gerfelin Length = 184

Iteration: 1
 Score = 67.0 bits (162), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 56/194 (28%), Positives = 89/194 (45%), Gaps = 48/194 (24%)
Query: 120 EPGPLKGGTTH---IAFVKDPDGYIFELIQRGPTPEPLCQVMLRVGDLGRSIKFYEKALG 176
           EP P   G T     +   DPD    + +        L Q MLR+ D  +S+ FY + LG
Sbjct: 3   EPQPASSGLTDETAFSCCSDPDPSTKDFL--------LQQTMLRIKDPKKSLDFYTRVLG 54
Query: 177 MKLLRTVDKPEYKYTLAMLGYAEED---------------QTTVLELTYNYGVTE----- 216
           + LL+ +D P  K++L  L Y +++               +   LELT+N+G  +     
Sbjct: 55  LTLLQKLDFPAMKFSLYFLAYEDKNDIPKDKSEKTAWTFSRKATLELTHNWGTEDDETQS 114
Query: 217 YTKGNA----YAQVAISTDDVYKSAEVVNLVTQELGGKITRQP--GSIPGLNTKITSFV- 269
           Y  GN+    +  + I+  DVY + +      +ELG K  ++P  G + GL     +F+ 
Sbjct: 115 YHNGNSDPRGFGHIGIAVPDVYSACKRF----EELGVKFVKKPDDGKMKGL-----AFIQ 165
Query: 270 DPDG-WKTVLVDNE 282
           DPDG W  +L  N+
Sbjct: 166 DPDGYWIEILNPNK 179

>pdb|1FRO|A Chain A, Human Glyoxalase I With Benzyl-Glutathione Inhibitor Length = 183

Iteration: 1
 Score = 67.4 bits (163), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 46/147 (31%), Positives = 67/147 (45%), Gaps = 30/147 (20%)
Query: 26  HAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQS------------- 72
             + RV D  +++ FYT   GM L++K D P  K+S  FL +  +               
Sbjct: 33  QTMLRVKDPKKSLDFYTRVLGMTLIQKCDFPIMKFSLYFLAYEDKNDIPKEKDEKIAWAL 92
Query: 73  --HFVVELTYNYG-----VTSYDIGT----GFGHFAIATEDVYKLVENIRAKGGNVTREP 121
                +ELT+N+G       SY  G     GFGH  IA  DVY   +     G    ++P
Sbjct: 93  SRKATLELTHNWGTEDDETQSYHNGNSDPRGFGHIGIAVPDVYSACKRFEELGVKFVKKP 152
Query: 122 --GPLKGGTTHIAFVKDPDGYIFELIQ 146
             G +KG    +AF++DPDGY  E++ 
Sbjct: 153 DDGKMKG----LAFIQDPDGYWIEILN 175

>pdb|1FRO|A Chain A, Human Glyoxalase I With Benzyl-Glutathione Inhibitor Length = 183

Iteration: 1
 Score = 65.5 bits (158), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 57/194 (29%), Positives = 89/194 (45%), Gaps = 48/194 (24%)
Query: 120 EPGPLKGGTTH---IAFVKDPDGYIFELIQRGPTPEPLCQVMLRVGDLGRSIKFYEKALG 176
           EP P  GG T    ++   D D    + +        L Q MLRV D  +S+ FY + LG
Sbjct: 2   EPQPPSGGLTDEAALSCCSDADPSTKDFL--------LQQTMLRVKDPKKSLDFYTRVLG 53
Query: 177 MKLLRTVDKPEYKYTLAMLGYAEED---------------QTTVLELTYNYGVTE----- 216
           M L++  D P  K++L  L Y +++               +   LELT+N+G  +     
Sbjct: 54  MTLIQKCDFPIMKFSLYFLAYEDKNDIPKEKDEKIAWALSRKATLELTHNWGTEDDETQS 113
Query: 217 YTKGNA----YAQVAISTDDVYKSAEVVNLVTQELGGKITRQP--GSIPGLNTKITSFV- 269
           Y  GN+    +  + I+  DVY + +      +ELG K  ++P  G + GL     +F+ 
Sbjct: 114 YHNGNSDPRGFGHIGIAVPDVYSACKRF----EELGVKFVKKPDDGKMKGL-----AFIQ 164
Query: 270 DPDG-WKTVLVDNE 282
           DPDG W  +L  N+
Sbjct: 165 DPDGYWIEILNPNK 178

>pdb|3VW9|A Chain A, Human Glyoxalase I With An N-Hydroxypyridone Inhibitor Length = 187

Iteration: 1
 Score = 67.0 bits (162), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 46/147 (31%), Positives = 67/147 (45%), Gaps = 30/147 (20%)
Query: 26  HAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQS------------- 72
             + RV D  +++ FYT   GM L++K D P  K+S  FL +  +               
Sbjct: 37  QTMLRVKDPKKSLDFYTRVLGMTLIQKCDFPIMKFSLYFLAYEDKNDIPKEKDEKIAWAL 96
Query: 73  --HFVVELTYNYG-----VTSYDIGT----GFGHFAIATEDVYKLVENIRAKGGNVTREP 121
                +ELT+N+G       SY  G     GFGH  IA  DVY   +     G    ++P
Sbjct: 97  SRKATLELTHNWGTEDDETQSYHNGNSDPRGFGHIGIAVPDVYSACKRFEELGVKFVKKP 156
Query: 122 --GPLKGGTTHIAFVKDPDGYIFELIQ 146
             G +KG    +AF++DPDGY  E++ 
Sbjct: 157 DDGKMKG----LAFIQDPDGYWIEILN 179

>pdb|3VW9|A Chain A, Human Glyoxalase I With An N-Hydroxypyridone Inhibitor Length = 187

Iteration: 1
 Score = 66.6 bits (161), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 58/199 (29%), Positives = 91/199 (45%), Gaps = 48/199 (24%)
Query: 115 GNVTREPGPLKGGTTH---IAFVKDPDGYIFELIQRGPTPEPLCQVMLRVGDLGRSIKFY 171
           G+   EP P  GG T    ++   D D    + +        L Q MLRV D  +S+ FY
Sbjct: 1   GSHMAEPQPPSGGLTDEAALSCCSDADPSTKDFL--------LQQTMLRVKDPKKSLDFY 52
Query: 172 EKALGMKLLRTVDKPEYKYTLAMLGYAEED---------------QTTVLELTYNYGVTE 216
            + LGM L++  D P  K++L  L Y +++               +   LELT+N+G  +
Sbjct: 53  TRVLGMTLIQKCDFPIMKFSLYFLAYEDKNDIPKEKDEKIAWALSRKATLELTHNWGTED 112
Query: 217 -----YTKGNA----YAQVAISTDDVYKSAEVVNLVTQELGGKITRQP--GSIPGLNTKI 265
                Y  GN+    +  + I+  DVY + +      +ELG K  ++P  G + GL    
Sbjct: 113 DETQSYHNGNSDPRGFGHIGIAVPDVYSACKRF----EELGVKFVKKPDDGKMKGL---- 164
Query: 266 TSFV-DPDG-WKTVLVDNE 282
            +F+ DPDG W  +L  N+
Sbjct: 165 -AFIQDPDGYWIEILNPNK 182

>pdb|1BH5|A Chain A, Human Glyoxalase I Q33e, E172q Double Mutant Length = 183

Iteration: 1
 Score = 65.9 bits (159), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 45/145 (31%), Positives = 67/145 (46%), Gaps = 30/145 (20%)
Query: 28  VYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQS--------------- 72
           + RV D  +++ FYT   GM L++K D P  K+S  FL +  +                 
Sbjct: 35  MLRVKDPKKSLDFYTRVLGMTLIQKCDFPIMKFSLYFLAYEDKNDIPKEKDEKIAWALSR 94
Query: 73  HFVVELTYNYG-----VTSYDIGT----GFGHFAIATEDVYKLVENIRAKGGNVTREP-- 121
              +ELT+N+G       SY  G     GFGH  IA  DVY   +     G    ++P  
Sbjct: 95  KATLELTHNWGTEDDETQSYHNGNSDPRGFGHIGIAVPDVYSACKRFEELGVKFVKKPDD 154
Query: 122 GPLKGGTTHIAFVKDPDGYIFELIQ 146
           G +KG    +AF++DPDGY  +++ 
Sbjct: 155 GKMKG----LAFIQDPDGYWIQILN 175

>pdb|1BH5|A Chain A, Human Glyoxalase I Q33e, E172q Double Mutant Length = 183

Iteration: 1
 Score = 63.9 bits (154), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 56/194 (28%), Positives = 89/194 (45%), Gaps = 48/194 (24%)
Query: 120 EPGPLKGGTTH---IAFVKDPDGYIFELIQRGPTPEPLCQVMLRVGDLGRSIKFYEKALG 176
           EP P  GG T    ++   D D    + +        L + MLRV D  +S+ FY + LG
Sbjct: 2   EPQPPSGGLTDEAALSCCSDADPSTKDFL--------LQETMLRVKDPKKSLDFYTRVLG 53
Query: 177 MKLLRTVDKPEYKYTLAMLGYAEED---------------QTTVLELTYNYGVTE----- 216
           M L++  D P  K++L  L Y +++               +   LELT+N+G  +     
Sbjct: 54  MTLIQKCDFPIMKFSLYFLAYEDKNDIPKEKDEKIAWALSRKATLELTHNWGTEDDETQS 113
Query: 217 YTKGNA----YAQVAISTDDVYKSAEVVNLVTQELGGKITRQP--GSIPGLNTKITSFV- 269
           Y  GN+    +  + I+  DVY + +      +ELG K  ++P  G + GL     +F+ 
Sbjct: 114 YHNGNSDPRGFGHIGIAVPDVYSACKRF----EELGVKFVKKPDDGKMKGL-----AFIQ 164
Query: 270 DPDG-WKTVLVDNE 282
           DPDG W  +L  N+
Sbjct: 165 DPDGYWIQILNPNK 178

>pdb|3BQX|A Chain A, High Resolution Crystal Structure Of A Glyoxalase-Related Enzyme From Fulvimarina Pelagi Length = 150

Iteration: 1
 Score = 41.6 bits (96), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 37/119 (31%), Positives = 54/119 (45%), Gaps = 13/119 (10%)
Query: 31  VGDLDRTIKFYTECFGMKLLRKRDVPEEKY--SNAFLGFGPEQSHFVVELTYNYG--VTS 86
           +GDL+ + +FY E FG   + +   PE  +   N F+      +  V  L  + G  VTS
Sbjct: 13  IGDLEASARFYGEGFGWAPVFRN--PEIIFYQXNGFV----LATWLVQNLQEDVGVAVTS 66
Query: 87  YDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREP-GPLKGGTTHIAFVKDPDGYIFEL 144
                   H   A  +V  L E + A GG + R    P  GG     +V DPDG+I+E+
Sbjct: 67  RPGSXALAHNVRAETEVAPLXERLVAAGGQLLRPADAPPHGGLR--GYVADPDGHIWEI 123

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	291
2c21_A	144	Trypanothione-dependent glyoxalase I; lyase, gluta	3e-62
2c21_A	144	Trypanothione-dependent glyoxalase I; lyase, gluta	3e-37
1f9z_A	135	Glyoxalase I; beta-alpha-beta-BETA-beta motif, pro	3e-61
1f9z_A	135	Glyoxalase I; beta-alpha-beta-BETA-beta motif, pro	5e-38
2za0_A	184	Glyoxalase I; lyase, lactoylglutathione lyase, met	2e-45
2za0_A	184	Glyoxalase I; lyase, lactoylglutathione lyase, met	4e-32
3oa4_A	161	Glyoxalase, BH1468 protein; structural genomics, p	2e-39
3oa4_A	161	Glyoxalase, BH1468 protein; structural genomics, p	5e-20
3rmu_A	134	Methylmalonyl-COA epimerase, mitochondrial; struct	3e-36
3rmu_A	134	Methylmalonyl-COA epimerase, mitochondrial; struct	1e-19
3l7t_A	134	SMU.1112C, putative uncharacterized protein; metal	2e-34
3l7t_A	134	SMU.1112C, putative uncharacterized protein; metal	2e-16
2p25_A	126	Glyoxalase family protein; structural genomics, MC	4e-33
2p25_A	126	Glyoxalase family protein; structural genomics, MC	3e-15
3oxh_A	282	RV0577 protein; kinase regulation, antibiotic resi	4e-33
3oxh_A	282	RV0577 protein; kinase regulation, antibiotic resi	5e-12
3oxh_A	282	RV0577 protein; kinase regulation, antibiotic resi	5e-07
3r6a_A	144	Uncharacterized protein; PSI biology, structural g	5e-31
3r6a_A	144	Uncharacterized protein; PSI biology, structural g	9e-17
3hdp_A	133	Glyoxalase-I; glutathione,lyase, methylglyoxal,110	4e-29
3hdp_A	133	Glyoxalase-I; glutathione,lyase, methylglyoxal,110	2e-16
3kol_A	156	Oxidoreductase, glyoxalase/bleomycin resistance pr	1e-26
3kol_A	156	Oxidoreductase, glyoxalase/bleomycin resistance pr	2e-10
4g6x_A	155	Glyoxalase/bleomycin resistance protein/dioxygena;	1e-26
4g6x_A	155	Glyoxalase/bleomycin resistance protein/dioxygena;	3e-13
3e5d_A	127	Putative glyoxalase I; structural genomics, joint	5e-25
3e5d_A	127	Putative glyoxalase I; structural genomics, joint	2e-11
2rk9_A	145	Glyoxalase/bleomycin resistance protein/dioxygena;	7e-24
2rk9_A	145	Glyoxalase/bleomycin resistance protein/dioxygena;	2e-11
1ss4_A	153	Glyoxalase family protein; structural genomics, PS	8e-23
1ss4_A	153	Glyoxalase family protein; structural genomics, PS	2e-10
3r4q_A	160	Lactoylglutathione lyase; structural genomics, PSI	5e-20
3r4q_A	160	Lactoylglutathione lyase; structural genomics, PSI	8e-06
2r6u_A	148	Uncharacterized protein; structural genomics, PSI-	2e-19
2r6u_A	148	Uncharacterized protein; structural genomics, PSI-	6e-15
2qqz_A	126	Glyoxalase family protein, putative; alpha-beta st	3e-19
2qqz_A	126	Glyoxalase family protein, putative; alpha-beta st	8e-06
1twu_A	139	Hypothetical protein YYCE; structural genomics, pr	6e-19
1twu_A	139	Hypothetical protein YYCE; structural genomics, pr	3e-17
3huh_A	152	Virulence protein STM3117; structural genomics, ny	5e-18
3huh_A	152	Virulence protein STM3117; structural genomics, ny	9e-06
3uh9_A	145	Metallothiol transferase FOSB 2; structural genomi	2e-17
3uh9_A	145	Metallothiol transferase FOSB 2; structural genomi	6e-05
3ghj_A	141	Putative integron gene cassette protein; integron	6e-17
3ghj_A	141	Putative integron gene cassette protein; integron	5e-05
1r9c_A	139	Glutathione transferase; fosfomycin resistance pro	9e-17
1r9c_A	139	Glutathione transferase; fosfomycin resistance pro	7e-07
1npb_A	141	Fosfomycin-resistance protein; manganese binding,	3e-16
1npb_A	141	Fosfomycin-resistance protein; manganese binding,	6e-04
3ct8_A	146	Protein BH2160, putative glyoxalase; NP_243026.1,	5e-16
3ct8_A	146	Protein BH2160, putative glyoxalase; NP_243026.1,	3e-05
1xqa_A	113	Glyoxalase/bleomycin resistance protein; dioxygena	8e-16
1xqa_A	113	Glyoxalase/bleomycin resistance protein; dioxygena	2e-05
2rk0_A	136	Glyoxalase/bleomycin resistance protein/dioxygena;	5e-15
2rk0_A	136	Glyoxalase/bleomycin resistance protein/dioxygena;	5e-05
3ey7_A	133	Biphenyl-2,3-DIOL 1,2-dioxygenase III-related prot	9e-15
1nki_A	135	Probable fosfomycin resistance protein; potassium	1e-14
1nki_A	135	Probable fosfomycin resistance protein; potassium	4e-04
2qnt_A	141	AGR_C_3434P, uncharacterized protein ATU1872; glyo	1e-14
2qnt_A	141	AGR_C_3434P, uncharacterized protein ATU1872; glyo	2e-09
1mpy_A	307	Catechol 2,3-dioxygenase; extradiol dioxygenase, n	2e-14
1mpy_A	307	Catechol 2,3-dioxygenase; extradiol dioxygenase, n	6e-07
2p7o_A	133	Glyoxalase family protein; fosfomycin resistance p	3e-14
2p7o_A	133	Glyoxalase family protein; fosfomycin resistance p	8e-06
2rbb_A	141	Glyoxalase/bleomycin resistance protein/dioxygena;	4e-14
2rbb_A	141	Glyoxalase/bleomycin resistance protein/dioxygena;	2e-07
3rri_A	135	Glyoxalase/bleomycin resistance protein/dioxygena;	5e-14
1f1u_A	323	Homoprotocatechuate 2,3-dioxygenase; extradiol, ma	6e-14
1f1u_A	323	Homoprotocatechuate 2,3-dioxygenase; extradiol, ma	9e-05
3zw5_A	147	Glyoxalase domain-containing protein 5; lyase; 1.6	7e-14
3zw5_A	147	Glyoxalase domain-containing protein 5; lyase; 1.6	9e-05
3bqx_A	150	Glyoxalase-related enzyme; VOC superfamily, PSI-2,	7e-14
3bqx_A	150	Glyoxalase-related enzyme; VOC superfamily, PSI-2,	7e-09
1jc4_A	148	Methylmalonyl-COA epimerase; vicinal oxygen chelat	1e-13
1jc4_A	148	Methylmalonyl-COA epimerase; vicinal oxygen chelat	4e-04
2pjs_A	119	AGR_C_3564P, uncharacterized protein ATU1953; glyo	3e-13
2pjs_A	119	AGR_C_3564P, uncharacterized protein ATU1953; glyo	4e-04
3hpy_A	309	Catechol 2,3-dioxygenase; repeated motifs, aromati	3e-13
3lm4_A	339	Catechol 2,3-dioxygenase; NYSGXRC, PSI-II, protein	4e-13
3lm4_A	339	Catechol 2,3-dioxygenase; NYSGXRC, PSI-II, protein	6e-06
3eck_A	365	Protein (homoprotocatechuate 2,3-dioxygenase); oxi	5e-13
3m2o_A	164	Glyoxalase/bleomycin resistance protein; unknown f	6e-13
3pkv_A	252	Toxoflavin lyase (TFLA); metalloenzyme, vicinal ox	1e-12
1zsw_A	338	Metallo protein, glyoxalase family protein; hypoth	4e-12
1zsw_A	338	Metallo protein, glyoxalase family protein; hypoth	3e-08
3itw_A	137	Protein TIOX; bleomycin resistance fold, bisinterc	1e-11
3itw_A	137	Protein TIOX; bleomycin resistance fold, bisinterc	5e-05
3b59_A	310	Glyoxalase/bleomycin resistance protein/dioxygena;	2e-11
3b59_A	310	Glyoxalase/bleomycin resistance protein/dioxygena;	4e-04
2i7r_A	118	Conserved domain protein; structural genomics cons	2e-11
2i7r_A	118	Conserved domain protein; structural genomics cons	1e-06
2a4x_A	138	Mitomycin-binding protein; ALFA/beta protein, mito	3e-11
2a4x_A	138	Mitomycin-binding protein; ALFA/beta protein, mito	5e-04
3g12_A	128	Putative lactoylglutathione lyase; glyoxalase, ble	7e-11
3g12_A	128	Putative lactoylglutathione lyase; glyoxalase, ble	6e-06
1sp8_A	418	4-hydroxyphenylpyruvate dioxygenase; oxidoreductas	1e-10
1lgt_A	297	Biphenyl-2,3-DIOL 1,2-dioxygenase; extradiol dioxy	2e-10
3gm5_A	159	Lactoylglutathione lyase and related lyases; sheet	4e-10
3oaj_A	335	Putative ring-cleaving dioxygenase MHQO; structura	1e-09
3oaj_A	335	Putative ring-cleaving dioxygenase MHQO; structura	1e-07
2zyq_A	300	Probable biphenyl-2,3-DIOL 1,2-dioxygenase BPHC; e	4e-09
2zyq_A	300	Probable biphenyl-2,3-DIOL 1,2-dioxygenase BPHC; e	4e-04
3fcd_A	134	Lyase, ORF125EGC139; lactoylglutathione lyase, YEC	2e-08
3fcd_A	134	Lyase, ORF125EGC139; lactoylglutathione lyase, YEC	1e-04
1ecs_A	126	Bleomycin resistance protein; arm-exchange, antibi	3e-08
3rhe_A	148	NAD-dependent benzaldehyde dehydrogenase; structur	3e-08
2kjz_A	144	ATC0852; protein of unknown function, dimer, struc	3e-08
2kjz_A	144	ATC0852; protein of unknown function, dimer, struc	2e-04
3isq_A	393	4-hydroxyphenylpyruvate dioxygenase; tyrosine meta	6e-08
1kw3_B	292	2,3-dihydroxybiphenyl dioxygenase; four TIME repet	7e-08
2wl9_A	305	Catechol 2,3-dioxygenase; aromatic hydrocarbons ca	1e-07
2wl9_A	305	Catechol 2,3-dioxygenase; aromatic hydrocarbons ca	9e-04
3bt3_A	148	Glyoxalase-related enzyme, ARAC type; VOC superfam	1e-07
2ehz_A	302	1,2-dihydroxynaphthalene dioxygenase; extradiol di	6e-07
3sk2_A	132	EHPR; antibiotic resistance, griseoluteate-binding	9e-07
1xy7_A	166	Unknown protein; structural genomics, protein stru	2e-06
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	4e-06
1xrk_A	124	Bleomycin resistance protein; arm exchange, ligand	7e-06
1t47_A	381	4-hydroxyphenylpyruvate dioxygenase; triketone inh	2e-04
1sqd_A	424	4-hydroxyphenylpyruvate dioxygenase; oxidoreductas	2e-04

>2c21_A Trypanothione-dependent glyoxalase I; lyase, glutathionylspermidine, methylglyoxal, detoxification; 2.0A {Leishmania major} SCOP: d.32.1.1 Length = 144

 Score =  192 bits (490), Expect = 3e-62
 Identities = 72/143 (50%), Positives = 87/143 (60%), Gaps = 5/143 (3%)

Query: 21  KRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTY 80
            RR LH + RVGDLDR+IKFYTE  GMK+LRK DVPE+KY+  FLG+GPE S  V+ELTY
Sbjct: 6   SRRMLHTMIRVGDLDRSIKFYTERLGMKVLRKWDVPEDKYTLVFLGYGPEMSSTVLELTY 65

Query: 81  NYGVTSYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGY 140
           NYGVTSY     +GH AI  EDV +LV ++R     +  E       +  +AFV DPDGY
Sbjct: 66  NYGVTSYKHDEAYGHIAIGVEDVKELVADMRKHDVPIDYED-----ESGFMAFVVDPDGY 120

Query: 141 IFELIQRGPTPEPLCQVMLRVGD 163
             EL+      E     M   G 
Sbjct: 121 YIELLNEKTMMEKAEADMKEQGT 143

>2c21_A Trypanothione-dependent glyoxalase I; lyase, glutathionylspermidine, methylglyoxal, detoxification; 2.0A {Leishmania major} SCOP: d.32.1.1 Length = 144

 Score =  128 bits (324), Expect = 3e-37
 Identities = 56/136 (41%), Positives = 78/136 (57%), Gaps = 9/136 (6%)

Query: 156 QVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVT 215
             M+RVGDL RSIKFY + LGMK+LR  D PE KYTL  LGY  E  +TVLELTYNYGVT
Sbjct: 11  HTMIRVGDLDRSIKFYTERLGMKVLRKWDVPEDKYTLVFLGYGPEMSSTVLELTYNYGVT 70

Query: 216 EYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWK 275
            Y    AY  +AI  +DV +    +    ++    I  +  S       +   VDPDG+ 
Sbjct: 71  SYKHDEAYGHIAIGVEDVKELVADM----RKHDVPIDYEDES-----GFMAFVVDPDGYY 121

Query: 276 TVLVDNEDFLKELQSE 291
             L++ +  +++ +++
Sbjct: 122 IELLNEKTMMEKAEAD 137

>1f9z_A Glyoxalase I; beta-alpha-beta-BETA-beta motif, protein-NI(II) complex, homodimer, lyase; 1.50A {Escherichia coli} SCOP: d.32.1.1 PDB: 1fa5_A 1fa6_A 1fa7_A 1fa8_A Length = 135

 Score =  189 bits (482), Expect = 3e-61
 Identities = 74/132 (56%), Positives = 93/132 (70%)

Query: 23  RFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNY 82
           R LH + RVGDL R+I FYT+  GMKLLR  + PE KYS AF+G+GPE    V+ELTYN+
Sbjct: 2   RLLHTMLRVGDLQRSIDFYTKVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNW 61

Query: 83  GVTSYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIF 142
           GV  Y++GT +GH A++ ++  +  E IR  GGNVTRE GP+KGGTT IAFV+DPDGY  
Sbjct: 62  GVDKYELGTAYGHIALSVDNAAEACEKIRQNGGNVTREAGPVKGGTTVIAFVEDPDGYKI 121

Query: 143 ELIQRGPTPEPL 154
           ELI+       L
Sbjct: 122 ELIEEKDAGRGL 133

>1f9z_A Glyoxalase I; beta-alpha-beta-BETA-beta motif, protein-NI(II) complex, homodimer, lyase; 1.50A {Escherichia coli} SCOP: d.32.1.1 PDB: 1fa5_A 1fa6_A 1fa7_A 1fa8_A Length = 135

 Score =  130 bits (328), Expect = 5e-38
 Identities = 63/133 (47%), Positives = 86/133 (64%), Gaps = 4/133 (3%)

Query: 156 QVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVT 215
             MLRVGDL RSI FY K LGMKLLRT + PEYKY+LA +GY  E +  V+ELTYN+GV 
Sbjct: 5   HTMLRVGDLQRSIDFYTKVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNWGVD 64

Query: 216 EYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWK 275
           +Y  G AY  +A+S D+  ++ E +    ++ GG +TR+ G + G  T I    DPDG+K
Sbjct: 65  KYELGTAYGHIALSVDNAAEACEKI----RQNGGNVTREAGPVKGGTTVIAFVEDPDGYK 120

Query: 276 TVLVDNEDFLKEL 288
             L++ +D  + L
Sbjct: 121 IELIEEKDAGRGL 133

>2za0_A Glyoxalase I; lyase, lactoylglutathione lyase, methyl- gerfelin; HET: MGI; 1.70A {Mus musculus} PDB: 1qip_A* 1fro_A* 1qin_A* 1bh5_A* Length = 184

 Score =  150 bits (380), Expect = 2e-45
 Identities = 49/186 (26%), Positives = 74/186 (39%), Gaps = 34/186 (18%)

Query: 1   MAEASPAAA---NAELLEW-----PKKDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRK 52
           MAE  PA++   +           P          + R+ D  +++ FYT   G+ LL+K
Sbjct: 1   MAEPQPASSGLTDETAFSCCSDPDPSTKDFLLQQTMLRIKDPKKSLDFYTRVLGLTLLQK 60

Query: 53  RDVPEEKYSNAFLGFGPE---------------QSHFVVELTYNYGV-----TSYDIG-- 90
            D P  K+S  FL +  +                    +ELT+N+G       SY  G  
Sbjct: 61  LDFPAMKFSLYFLAYEDKNDIPKDKSEKTAWTFSRKATLELTHNWGTEDDETQSYHNGNS 120

Query: 91  --TGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRG 148
              GFGH  IA  DVY   +     G    ++P    G    +AF++DPDGY  E++   
Sbjct: 121 DPRGFGHIGIAVPDVYSACKRFEELGVKFVKKPDD--GKMKGLAFIQDPDGYWIEILNPN 178

Query: 149 PTPEPL 154
                +
Sbjct: 179 KIATII 184

>2za0_A Glyoxalase I; lyase, lactoylglutathione lyase, methyl- gerfelin; HET: MGI; 1.70A {Mus musculus} PDB: 1qip_A* 1fro_A* 1qin_A* 1bh5_A* Length = 184

 Score =  116 bits (291), Expect = 4e-32
 Identities = 51/195 (26%), Positives = 85/195 (43%), Gaps = 43/195 (22%)

Query: 120 EPGPLKGGTTH---IAFVKDPDGYIFELIQRGPTPEPLCQVMLRVGDLGRSIKFYEKALG 176
           EP P   G T     +   DPD    + +        L Q MLR+ D  +S+ FY + LG
Sbjct: 3   EPQPASSGLTDETAFSCCSDPDPSTKDFL--------LQQTMLRIKDPKKSLDFYTRVLG 54

Query: 177 MKLLRTVDKPEYKYTLAMLGYAEED---------------QTTVLELTYNYGVTE----- 216
           + LL+ +D P  K++L  L Y +++               +   LELT+N+G  +     
Sbjct: 55  LTLLQKLDFPAMKFSLYFLAYEDKNDIPKDKSEKTAWTFSRKATLELTHNWGTEDDETQS 114

Query: 217 YTKGNA----YAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFV-DP 271
           Y  GN+    +  + I+  DVY + +      +ELG K  ++P        K  +F+ DP
Sbjct: 115 YHNGNSDPRGFGHIGIAVPDVYSACKRF----EELGVKFVKKPDDGK---MKGLAFIQDP 167

Query: 272 DGWKTVLVDNEDFLK 286
           DG+   +++      
Sbjct: 168 DGYWIEILNPNKIAT 182

>3oa4_A Glyoxalase, BH1468 protein; structural genomics, protein structure initiative, glyoxalas PSI-biology, lyase; 1.94A {Bacillus halodurans} Length = 161

 Score =  134 bits (340), Expect = 2e-39
 Identities = 30/137 (21%), Positives = 56/137 (40%), Gaps = 6/137 (4%)

Query: 23  RFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNY 82
           +  H    V  +   + FY     +KLL   D+P +    AFL  G  +   +  L+   
Sbjct: 8   KLDHIGIAVTSIKDVLPFYVGSLKLKLLGMEDLPSQGVKIAFLEIGESKIELLEPLSEES 67

Query: 83  GVTSY--DIGTGFGHFAIATEDVYKLVENIRAKGGNV-TREPGPLKGGTTHIAFV--KDP 137
            +  +    G G  H AI  + + + ++ ++  G  +   EP P   G   +AF+  +  
Sbjct: 68  PIAKFIQKRGEGIHHIAIGVKSIEERIQEVKENGVQMINDEPVPGARGAQ-VAFLHPRSA 126

Query: 138 DGYIFELIQRGPTPEPL 154
            G ++E  ++    E L
Sbjct: 127 RGVLYEFCEKKEQAENL 143

>3oa4_A Glyoxalase, BH1468 protein; structural genomics, protein structure initiative, glyoxalas PSI-biology, lyase; 1.94A {Bacillus halodurans} Length = 161

 Score = 83.7 bits (207), Expect = 5e-20
 Identities = 25/119 (21%), Positives = 47/119 (39%), Gaps = 9/119 (7%)

Query: 156 QVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVT 215
            + + V  +   + FY  +L +KLL   D P     +A L   E     +  L+    + 
Sbjct: 11  HIGIAVTSIKDVLPFYVGSLKLKLLGMEDLPSQGVKIAFLEIGESKIELLEPLSEESPIA 70

Query: 216 EYTK--GNAYAQVAISTDDVYKSAEVVNLVTQELGGK-ITRQPGSIPGLNTKITSFVDP 271
           ++ +  G     +AI    + +  + V    +E G + I  +P   PG      +F+ P
Sbjct: 71  KFIQKRGEGIHHIAIGVKSIEERIQEV----KENGVQMINDEPV--PGARGAQVAFLHP 123

>3rmu_A Methylmalonyl-COA epimerase, mitochondrial; structural genomics consortium, SGC, vitamin B12, mitochondr isomerase; HET: PG4; 1.80A {Homo sapiens} Length = 134

 Score =  125 bits (316), Expect = 3e-36
 Identities = 28/131 (21%), Positives = 50/131 (38%), Gaps = 7/131 (5%)

Query: 22  RRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYN 81
            R  H    V DL++   FY    G ++     +PE   S  F+  G  +   +  L  +
Sbjct: 4   GRLNHVAIAVPDLEKAAAFYKNILGAQVSEAVPLPEHGVSVVFVNLGNTKMELLHPLGLD 63

Query: 82  YGVTSY---DIGTGFGHFAIATEDVYKLVENIRAKGGNV-TREPGPLKGGTTHIAFV--K 135
             +  +   +   G  H  I  +++   V +++ K     + E      G   + F+  K
Sbjct: 64  SPIAGFLQKNKAGGMHHICIEVDNINAAVMDLKKKKIRSLSEEVKIGAHGKP-VIFLHPK 122

Query: 136 DPDGYIFELIQ 146
           D  G + EL Q
Sbjct: 123 DCGGVLVELEQ 133

>3rmu_A Methylmalonyl-COA epimerase, mitochondrial; structural genomics consortium, SGC, vitamin B12, mitochondr isomerase; HET: PG4; 1.80A {Homo sapiens} Length = 134

 Score = 82.1 bits (203), Expect = 1e-19
 Identities = 19/124 (15%), Positives = 44/124 (35%), Gaps = 11/124 (8%)

Query: 156 QVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVT 215
            V + V DL ++  FY+  LG ++   V  PE+  ++  +         +  L  +  + 
Sbjct: 8   HVAIAVPDLEKAAAFYKNILGAQVSEAVPLPEHGVSVVFVNLGNTKMELLHPLGLDSPIA 67

Query: 216 EY---TKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFV--- 269
            +    K      + I  D++  +   +    ++   +   +   I      +  F+   
Sbjct: 68  GFLQKNKAGGMHHICIEVDNINAAVMDL----KKKKIRSLSEEVKIGAHGKPVI-FLHPK 122

Query: 270 DPDG 273
           D  G
Sbjct: 123 DCGG 126

>3l7t_A SMU.1112C, putative uncharacterized protein; metal binding protein; 1.80A {Streptococcus mutans} Length = 134

 Score =  120 bits (303), Expect = 2e-34
 Identities = 30/133 (22%), Positives = 47/133 (35%), Gaps = 10/133 (7%)

Query: 22  RRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHF----VVE 77
           +   H    V D D++ +FY    G +++R+   P+       L  G  +       + +
Sbjct: 4   KAVHHVALIVSDYDKSYEFYVNQLGFEVIRENHRPKRHDYKLDLKCGDIELEIFGNKLTD 63

Query: 78  LTYNYGVTSYDI---GTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGT-THIAF 133
             Y              G  H A   EDV    + + A G  +  E       T   +AF
Sbjct: 64  SNYCAPPERISWPREACGLRHLAFYVEDVEASRQELIALG--IRVEEVRYDDYTGKKMAF 121

Query: 134 VKDPDGYIFELIQ 146
             DPDG   EL +
Sbjct: 122 FFDPDGLPLELHE 134

>3l7t_A SMU.1112C, putative uncharacterized protein; metal binding protein; 1.80A {Streptococcus mutans} Length = 134

 Score = 73.2 bits (180), Expect = 2e-16
 Identities = 26/124 (20%), Positives = 43/124 (34%), Gaps = 12/124 (9%)

Query: 157 VMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGY----AEEDQTTVLELTYNY 212
           V L V D  +S +FY   LG +++R   +P+       L       E     + +  Y  
Sbjct: 9   VALIVSDYDKSYEFYVNQLGFEVIRENHRPKRHDYKLDLKCGDIELEIFGNKLTDSNYCA 68

Query: 213 GVTEYTKGNAYAQ---VAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFV 269
                +          +A   +DV  S + +      LG ++            K+  F 
Sbjct: 69  PPERISWPREACGLRHLAFYVEDVEASRQEL----IALGIRVEEVRYD-DYTGKKMAFFF 123

Query: 270 DPDG 273
           DPDG
Sbjct: 124 DPDG 127

>2p25_A Glyoxalase family protein; structural genomics, MCSG, PSI-2, protein struct initiative, midwest center for structural genomics, oxidore; 1.70A {Enterococcus faecalis} Length = 126

 Score =  117 bits (294), Expect = 4e-33
 Identities = 29/126 (23%), Positives = 47/126 (37%), Gaps = 4/126 (3%)

Query: 22  RRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYN 81
           +   H      +   T  FY E  G ++LR+   PE+      L  G ++          
Sbjct: 4   KEIHHVAINASNYQATKNFYVEKLGFEVLRENHRPEKNDIKLDLKLGSQELEI-FISDQF 62

Query: 82  YGVTSYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGT-THIAFVKDPDGY 140
               SY    G  H A   E + +++  +  +G  +  EP  +   T   + F  DPDG 
Sbjct: 63  PARPSYPEALGLRHLAFKVEHIEEVIAFLNEQG--IETEPLRVDDFTGKKMTFFFDPDGL 120

Query: 141 IFELIQ 146
             EL +
Sbjct: 121 PLELHE 126

>2p25_A Glyoxalase family protein; structural genomics, MCSG, PSI-2, protein struct initiative, midwest center for structural genomics, oxidore; 1.70A {Enterococcus faecalis} Length = 126

 Score = 69.8 bits (171), Expect = 3e-15
 Identities = 21/117 (17%), Positives = 38/117 (32%), Gaps = 6/117 (5%)

Query: 157 VMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTE 216
           V +   +   +  FY + LG ++LR   +PE       L      +  +           
Sbjct: 9   VAINASNYQATKNFYVEKLGFEVLRENHRPEKNDIKLDLKLG-SQELEIFISDQFPARPS 67

Query: 217 YTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDG 273
           Y +      +A   + + +    +     E G +             K+T F DPDG
Sbjct: 68  YPEALGLRHLAFKVEHIEEVIAFL----NEQGIETEPLRVD-DFTGKKMTFFFDPDG 119

>3oxh_A RV0577 protein; kinase regulation, antibiotic resistance, mycobacterium tube structural genomics, PSI, protein structure initiative; HET: PMB XYL; 1.75A {Mycobacterium tuberculosis} Length = 282

 Score =  121 bits (306), Expect = 4e-33
 Identities = 53/255 (20%), Positives = 77/255 (30%), Gaps = 36/255 (14%)

Query: 31  VGDLDRTIKFYTECFGMKLLRKRDVPEE--KYSNAFLGFGPEQSHFVVELTYNYGVTSYD 88
             D     KFYT  FG        VP     YS A L         V  +          
Sbjct: 40  TTDQSAAKKFYTSLFGWGY-DDNPVPGGGGVYSMATLNGEA-----VAAIAPMPPGAPEG 93

Query: 89  IGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRG 148
           +   +  + IA +DV  +V+ +   GG V      + G    ++F+ DP G    L Q  
Sbjct: 94  MPPIWNTY-IAVDDVDAVVDKVVPGGGQVMMPAFDI-GDAGRMSFITDPTGAAVGLWQAN 151

Query: 149 P--------TPEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEE 200
                        L    L       ++ FYE  +G+            Y +   G AE 
Sbjct: 152 RHIGATLVNETGTLIWNELLTDKPDLALAFYEAVVGLTHSSMEIAAGQNYRVLKAGDAEV 211

Query: 201 DQTTVLELTYNYGVTEYTKGN--AYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSI 258
                       G  E        +  V  + DD   +A          GG++  +P  I
Sbjct: 212 -----------GGCMEPPMPGVPNHWHVYFAVDDADATAAKA----AAAGGQVIAEPADI 256

Query: 259 PGLNTKITSFVDPDG 273
           P    +     DP G
Sbjct: 257 PS-VGRFAVLSDPQG 270

>3oxh_A RV0577 protein; kinase regulation, antibiotic resistance, mycobacterium tube structural genomics, PSI, protein structure initiative; HET: PMB XYL; 1.75A {Mycobacterium tuberculosis} Length = 282

 Score = 63.8 bits (155), Expect = 5e-12
 Identities = 23/136 (16%), Positives = 37/136 (27%), Gaps = 14/136 (10%)

Query: 16  WPKKDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFV 75
               +    +         D  + FY    G+          + Y     G         
Sbjct: 157 TLVNETGTLIWNELLTDKPDLALAFYEAVVGLTHSSMEIAAGQNYRVLKAGDAEV----- 211

Query: 76  VELTYNYGVTSYDIGTGFGHFAI--ATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAF 133
                  G     +     H+ +  A +D         A GG V  EP  +       A 
Sbjct: 212 ------GGCMEPPMPGVPNHWHVYFAVDDADATAAKAAAAGGQVIAEPADIPSV-GRFAV 264

Query: 134 VKDPDGYIFELIQRGP 149
           + DP G IF +++  P
Sbjct: 265 LSDPQGAIFSVLKAAP 280

>3oxh_A RV0577 protein; kinase regulation, antibiotic resistance, mycobacterium tube structural genomics, PSI, protein structure initiative; HET: PMB XYL; 1.75A {Mycobacterium tuberculosis} Length = 282

 Score = 49.2 bits (117), Expect = 5e-07
 Identities = 21/115 (18%), Positives = 34/115 (29%), Gaps = 10/115 (8%)

Query: 159 LRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYT 218
           L+  D   + KFY    G         P      +M   A  +   V  +          
Sbjct: 38  LQTTDQSAAKKFYTSLFGWG-YDDNPVPGGGGVYSM---ATLNGEAVAAIAPMPPGAPEG 93

Query: 219 KGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDG 273
               +    I+ DDV    + V       GG++      I     +++   DP G
Sbjct: 94  MPPIWN-TYIAVDDVDAVVDKV----VPGGGQVMMPAFDIGDA-GRMSFITDPTG 142

>3r6a_A Uncharacterized protein; PSI biology, structural genomics, NEW YORK structural genomi research consortium, putative glyoxalase I; 1.76A {Methanosarcina mazei} Length = 144

 Score =  112 bits (281), Expect = 5e-31
 Identities = 20/133 (15%), Positives = 41/133 (30%), Gaps = 14/133 (10%)

Query: 23  RFLHAVYR--VGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTY 80
           + L  + R  V DL+  ++FY E     +  + ++P+     A +      +        
Sbjct: 4   KILQILSRLYVADLNPALEFYEELLETPVAMRFEIPQTGVELAQISTILLIA-------- 55

Query: 81  NYGVTSYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGY 140
             G                 + + K    +   G  + R P  +  G      V+  DG 
Sbjct: 56  --GSEEALKPFRNTQATFLVDSLDKFKTFLEENGAEIIRGPSKVPTGRN--MTVRHSDGS 111

Query: 141 IFELIQRGPTPEP 153
           + E ++       
Sbjct: 112 VIEYVEHSKIEAE 124

>3r6a_A Uncharacterized protein; PSI biology, structural genomics, NEW YORK structural genomi research consortium, putative glyoxalase I; 1.76A {Methanosarcina mazei} Length = 144

 Score = 74.5 bits (183), Expect = 9e-17
 Identities = 28/124 (22%), Positives = 46/124 (37%), Gaps = 16/124 (12%)

Query: 157 VMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTE 216
             L V DL  +++FYE+ L   +    + P+    LA +        T+L +    G  E
Sbjct: 10  SRLYVADLNPALEFYEELLETPVAMRFEIPQTGVELAQIS-------TILLI---AGSEE 59

Query: 217 YTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKT 276
             K     Q     D + K    +    +E G +I R P  +P    +  +    DG   
Sbjct: 60  ALKPFRNTQATFLVDSLDKFKTFL----EENGAEIIRGPSKVPT--GRNMTVRHSDGSVI 113

Query: 277 VLVD 280
             V+
Sbjct: 114 EYVE 117

>3hdp_A Glyoxalase-I; glutathione,lyase, methylglyoxal,11003P,PSI2, structural GENOMIC,NYSGXRC., structural genomics; 2.06A {Clostridium acetobutylicum} PDB: 2qh0_A Length = 133

 Score =  107 bits (268), Expect = 4e-29
 Identities = 25/131 (19%), Positives = 47/131 (35%), Gaps = 10/131 (7%)

Query: 23  RFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNY 82
           +  H  Y V ++D  +K +     ++          K    F+  G  +    VEL    
Sbjct: 7   KVHHIGYAVKNIDSALKKFKRLGYVEESEVVRDEVRKVYIQFVINGGYR----VELVAPD 62

Query: 83  GVTS-----YDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKG-GTTHIAFVKD 136
           G  S        G+   H     ED+ K +E +   G  + ++           +AF+  
Sbjct: 63  GEDSPINKTIKKGSTPYHICYEVEDIQKSIEEMSQIGYTLFKKAEIAPAIDNRKVAFLFS 122

Query: 137 PDGYIFELIQR 147
            D  + EL+++
Sbjct: 123 TDIGLIELLEK 133

>3hdp_A Glyoxalase-I; glutathione,lyase, methylglyoxal,11003P,PSI2, structural GENOMIC,NYSGXRC., structural genomics; 2.06A {Clostridium acetobutylicum} PDB: 2qh0_A Length = 133

 Score = 72.9 bits (179), Expect = 2e-16
 Identities = 17/123 (13%), Positives = 45/123 (36%), Gaps = 14/123 (11%)

Query: 157 VMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTE 216
           +   V ++  ++K +++   ++    V     K  +  +          +EL    G   
Sbjct: 11  IGYAVKNIDSALKKFKRLGYVEESEVVRDEVRKVYIQFVINGG----YRVELVAPDGEDS 66

Query: 217 -----YTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFV-D 270
                  KG+    +    +D+ KS E +     ++G  + ++    P ++ +  +F+  
Sbjct: 67  PINKTIKKGSTPYHICYEVEDIQKSIEEM----SQIGYTLFKKAEIAPAIDNRKVAFLFS 122

Query: 271 PDG 273
            D 
Sbjct: 123 TDI 125

>3kol_A Oxidoreductase, glyoxalase/bleomycin resistance protein/dioxygenase; metal ION binding, NYSGXRC, PSI2, structural genomics; 1.90A {Nostoc punctiforme pcc 73102} Length = 156

 Score =  101 bits (253), Expect = 1e-26
 Identities = 25/138 (18%), Positives = 38/138 (27%), Gaps = 8/138 (5%)

Query: 22  RRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEE--------KYSNAFLGFGPEQSH 73
           R+  H    V D+  +  FY    G+  L   +VP          K +N     G     
Sbjct: 18  RKVHHIALNVQDMQASRYFYGTILGLHELTDDEVPATLTELVASGKVANFITPDGTILDL 77

Query: 74  FVVELTYNYGVTSYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAF 133
           F                T   H A   +               +    GP+   T    +
Sbjct: 78  FGEPELSPPDPNPEKTFTRAYHLAFDIDPQLFDRAVTVIGENKIAIAHGPVTRPTGRGVY 137

Query: 134 VKDPDGYIFELIQRGPTP 151
             DPDG++ E+       
Sbjct: 138 FYDPDGFMIEIRCDPEAE 155

>3kol_A Oxidoreductase, glyoxalase/bleomycin resistance protein/dioxygenase; metal ION binding, NYSGXRC, PSI2, structural genomics; 1.90A {Nostoc punctiforme pcc 73102} Length = 156

 Score = 57.6 bits (139), Expect = 2e-10
 Identities = 23/125 (18%), Positives = 32/125 (25%), Gaps = 12/125 (9%)

Query: 157 VMLRVGDLGRSIKFYEKALGMKLLRTVDKPE--------YKYTLAMLGYAEEDQTTVLEL 208
           + L V D+  S  FY   LG+  L   + P          K    +              
Sbjct: 23  IALNVQDMQASRYFYGTILGLHELTDDEVPATLTELVASGKVANFITPDGTILDLFGEPE 82

Query: 209 TYNYGVTEYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSF 268
                            +A   D       V  +   E    I   P + P    +   F
Sbjct: 83  LSPPDPNPEKTFTRAYHLAFDIDPQLFDRAVTVI--GENKIAIAHGPVTRPT--GRGVYF 138

Query: 269 VDPDG 273
            DPDG
Sbjct: 139 YDPDG 143

>4g6x_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 1.73A {Catenulispora acidiphila} Length = 155

 Score =  101 bits (252), Expect = 1e-26
 Identities = 26/127 (20%), Positives = 49/127 (38%), Gaps = 5/127 (3%)

Query: 23  RFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNY 82
           R       V D  +   FYT   G  +     V  +++        P+ +  ++E + + 
Sbjct: 26  RIHLTNVFVDDQAKAESFYTGKLGFLVKADVPVGADRWLTVVSPEAPDGTQLLLEPSSHA 85

Query: 83  GVTSYD---IGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDG 139
            VT +    +  G    + A +D+    E + A G   T+EP  +       A + D  G
Sbjct: 86  AVTPFKEALVADGIPAASFAVDDIAAEYERLSALGVRFTQEPTDMGPVV--TAILDDTCG 143

Query: 140 YIFELIQ 146
            + +L+Q
Sbjct: 144 NLIQLMQ 150

>4g6x_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 1.73A {Catenulispora acidiphila} Length = 155

 Score = 65.1 bits (158), Expect = 3e-13
 Identities = 21/123 (17%), Positives = 44/123 (35%), Gaps = 9/123 (7%)

Query: 154 LCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYG 213
           +    + V D  ++  FY   LG  +   V     ++   +   A +    +LE + +  
Sbjct: 27  IHLTNVFVDDQAKAESFYTGKLGFLVKADVPVGADRWLTVVSPEAPDGTQLLLEPSSHAA 86

Query: 214 VTEYTKGNAYAQV---AISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVD 270
           VT + +      +   + + DD+    E +      LG + T++P  +           D
Sbjct: 87  VTPFKEALVADGIPAASFAVDDIAAEYERL----SALGVRFTQEPTDMGP--VVTAILDD 140

Query: 271 PDG 273
             G
Sbjct: 141 TCG 143

>3e5d_A Putative glyoxalase I; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, lyase; 2.70A {Listeria monocytogenes str} Length = 127

 Score = 96.2 bits (239), Expect = 5e-25
 Identities = 30/128 (23%), Positives = 51/128 (39%), Gaps = 9/128 (7%)

Query: 23  RFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNY 82
           +  H      +L++  +FY   FG       +   + +++ FL F        +E+    
Sbjct: 3   KIEHVALWTTNLEQMKQFYVTYFGATANDLYENKTKGFNSYFLSFE---DGARLEIMSRT 59

Query: 83  GVTS--YDIGTGFGHFAIA---TEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDP 137
            VT        G+ H AI+    E V +L E +R  G  +  EP    G   + + V DP
Sbjct: 60  DVTGKTTGENLGWAHIAISTGTKEAVDELTEKLRQDGFAIAGEPRM-TGDGYYESVVLDP 118

Query: 138 DGYIFELI 145
           +G   E+ 
Sbjct: 119 EGNRIEIT 126

>3e5d_A Putative glyoxalase I; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, lyase; 2.70A {Listeria monocytogenes str} Length = 127

 Score = 59.6 bits (144), Expect = 2e-11
 Identities = 27/120 (22%), Positives = 44/120 (36%), Gaps = 9/120 (7%)

Query: 157 VMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTE 216
           V L   +L +  +FY    G       +     +    L + +      LE+     VT 
Sbjct: 7   VALWTTNLEQMKQFYVTYFGATANDLYENKTKGFNSYFLSFEDG---ARLEIMSRTDVTG 63

Query: 217 YTKGNA--YAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFV-DPDG 273
            T G    +A +AIST       E+   + ++ G  I  +P      +    S V DP+G
Sbjct: 64  KTTGENLGWAHIAISTGTKEAVDELTEKL-RQDGFAIAGEPRMTG--DGYYESVVLDPEG 120

>2rk9_A Glyoxalase/bleomycin resistance protein/dioxygena; NYSGXRC, structural genomics, protein structur initiative II; 1.60A {Vibrio splendidus} Length = 145

 Score = 93.6 bits (232), Expect = 7e-24
 Identities = 21/133 (15%), Positives = 47/133 (35%), Gaps = 16/133 (12%)

Query: 25  LHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHF----VVELTY 80
           +       D++ +  F+ +  G ++  +R  P+E++   +L                  +
Sbjct: 7   VVPELYCFDINVSQSFFVDVLGFEVKYER--PDEEF--VYLTLDGVDVMLEGIAGKSRKW 62

Query: 81  NYGVTSYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGP---LKGGTTHIA----F 133
             G   + +G+G  +F     D+  L + +     +           + G +        
Sbjct: 63  LSGDLEFPLGSGV-NFQWDVIDIEPLYQRVNESAADSIYLALESKSYQCGDSIATQKQFM 121

Query: 134 VKDPDGYIFELIQ 146
           V+ PDGY+F   Q
Sbjct: 122 VQTPDGYLFRFCQ 134

>2rk9_A Glyoxalase/bleomycin resistance protein/dioxygena; NYSGXRC, structural genomics, protein structur initiative II; 1.60A {Vibrio splendidus} Length = 145

 Score = 59.7 bits (144), Expect = 2e-11
 Identities = 17/121 (14%), Positives = 35/121 (28%), Gaps = 8/121 (6%)

Query: 158 MLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEE--DQTTVLELTYNYGVT 215
            L   D+  S  F+   LG ++    ++P+ ++    L   +   +        +  G  
Sbjct: 10  ELYCFDINVSQSFFVDVLGFEVKY--ERPDEEFVYLTLDGVDVMLEGIAGKSRKWLSGDL 67

Query: 216 EYTKGNAYAQVAISTDDVYKS-AEVVNLVTQELGGKITRQPGSIPGLNTKITSF--VDPD 272
           E+  G+          D+      V       +   +  +             F    PD
Sbjct: 68  EFPLGSGVN-FQWDVIDIEPLYQRVNESAADSIYLALESKSYQCGDSIATQKQFMVQTPD 126

Query: 273 G 273
           G
Sbjct: 127 G 127

>1ss4_A Glyoxalase family protein; structural genomics, PSI, prote structure initiative, midwest center for structural genomic unknown function; HET: CIT GSH; 1.84A {Bacillus cereus} SCOP: d.32.1.6 Length = 153

 Score = 91.1 bits (226), Expect = 8e-23
 Identities = 22/144 (15%), Positives = 46/144 (31%), Gaps = 22/144 (15%)

Query: 22  RRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDV-----------PEEKYSNAFLGFGPE 70
            R  +    V  LD  I F+ E  G+ L  + +V             +    A +     
Sbjct: 10  LRMDNVSIVVESLDNAISFFEE-IGLNLEGRANVEGEWAGRVTGLGSQCVEIAMMVTP-- 66

Query: 71  QSHFVVELTYNYGVTSYDI-------GTGFGHFAIATEDVYKLVENIRAKGGNVTREPGP 123
             H  +EL+      +            G+       ED+ ++V  +   G  +  E   
Sbjct: 67  DGHSRIELSRFLTPPTIADHRTAPVNALGYLRVMFTVEDIDEMVSRLTKHGAELVGEVVQ 126

Query: 124 LKGGTTHIAFVKDPDGYIFELIQR 147
               +  + +++  +G +  L + 
Sbjct: 127 -YENSYRLCYIRGVEGILIGLAEE 149

>1ss4_A Glyoxalase family protein; structural genomics, PSI, prote structure initiative, midwest center for structural genomic unknown function; HET: CIT GSH; 1.84A {Bacillus cereus} SCOP: d.32.1.6 Length = 153

 Score = 57.2 bits (138), Expect = 2e-10
 Identities = 18/135 (13%), Positives = 43/135 (31%), Gaps = 26/135 (19%)

Query: 157 VMLRVGDLGRSIKFYEKALGMKLLRTVDK-----------PEYKYTLAMLGYAEEDQTTV 205
           V + V  L  +I F+E  +G+ L    +                  +AM+     D  + 
Sbjct: 15  VSIVVESLDNAISFFE-EIGLNLEGRANVEGEWAGRVTGLGSQCVEIAMMVT--PDGHSR 71

Query: 206 LELTYNYGVTEYTKGNA-------YAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSI 258
           +EL+                    Y +V  + +D+ +    +     + G ++  +    
Sbjct: 72  IELSRFLTPPTIADHRTAPVNALGYLRVMFTVEDIDEMVSRL----TKHGAELVGEVVQY 127

Query: 259 PGLNTKITSFVDPDG 273
              + ++      +G
Sbjct: 128 EN-SYRLCYIRGVEG 141

>3r4q_A Lactoylglutathione lyase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.51A {Agrobacterium tumefaciens} Length = 160

 Score = 83.7 bits (207), Expect = 5e-20
 Identities = 22/134 (16%), Positives = 37/134 (27%), Gaps = 14/134 (10%)

Query: 22  RRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVE---- 77
              +       DLD    FY + FG++++ K           F   G +           
Sbjct: 7   SAIMETALYADDLDAAEAFYRDVFGLEMVLKLP-----GQLVFFKCGRQMLLLFDPQESS 61

Query: 78  LTYNYGVTSYDIGTGFGHFAI---ATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFV 134
                         G GHF        +V +      A    V        G  +   ++
Sbjct: 62  RADANNPIPRHGAVGQGHFCFYADDKAEVDEWKTRFEALEIPVEHYHRWPNGSYS--VYI 119

Query: 135 KDPDGYIFELIQRG 148
           +DP G   E+ +  
Sbjct: 120 RDPAGNSVEVGEGK 133

>3r4q_A Lactoylglutathione lyase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.51A {Agrobacterium tumefaciens} Length = 160

 Score = 44.0 bits (104), Expect = 8e-06
 Identities = 16/122 (13%), Positives = 30/122 (24%), Gaps = 14/122 (11%)

Query: 157 VMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYT-----LAMLGYAEEDQTTVLELTYN 211
             L   DL  +  FY    G++++  +      +      L +    E  +         
Sbjct: 12  TALYADDLDAAEAFYRDVFGLEMVLKLPGQLVFFKCGRQMLLLFDPQESSRADANNPIPR 71

Query: 212 YGVTEYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDP 271
           +G                 DD  +  E      + L   +           +      DP
Sbjct: 72  HG------AVGQGHFCFYADDKAEVDEWKTRF-EALEIPVE--HYHRWPNGSYSVYIRDP 122

Query: 272 DG 273
            G
Sbjct: 123 AG 124

>2r6u_A Uncharacterized protein; structural genomics, PSI-2, RHA04853, MCSG, protein structur initiative, midwest center for structural genomics; 1.50A {Rhodococcus SP} Length = 148

 Score = 81.9 bits (202), Expect = 2e-19
 Identities = 26/118 (22%), Positives = 41/118 (34%), Gaps = 5/118 (4%)

Query: 31  VGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIG 90
             D DR   FY + FG  +    ++P+  YS    G   E          N G+      
Sbjct: 33  FDDGDRARAFYRDAFGWAI---AEIPDMDYSMVTTGPVGESGMPDEPGYINGGMMQRGEV 89

Query: 91  TGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRG 148
           T      +  E +   +E I + GG       P+ G     A+  D +G +  L +  
Sbjct: 90  TTPV-VTVDVESIESALERIESLGGKTVTGRTPV-GNMGFAAYFTDSEGNVVGLWETA 145

>2r6u_A Uncharacterized protein; structural genomics, PSI-2, RHA04853, MCSG, protein structur initiative, midwest center for structural genomics; 1.50A {Rhodococcus SP} Length = 148

 Score = 69.5 bits (170), Expect = 6e-15
 Identities = 21/124 (16%), Positives = 41/124 (33%), Gaps = 9/124 (7%)

Query: 150 TPEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELT 209
               +    +   D  R+  FY  A G  +    + P+  Y++   G   E         
Sbjct: 22  MTGRIVHFEIPFDDGDRARAFYRDAFGWAI---AEIPDMDYSMVTTGPVGESGMPDEPGY 78

Query: 210 YNYGVTEYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFV 269
            N G+ +  +      V +  + +  + E +    + LGGK       +  +      F 
Sbjct: 79  INGGMMQRGEVTT-PVVTVDVESIESALERI----ESLGGKTVTGRTPVGNM-GFAAYFT 132

Query: 270 DPDG 273
           D +G
Sbjct: 133 DSEG 136

>2qqz_A Glyoxalase family protein, putative; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; HET: MSE; 1.92A {Bacillus anthracis str} Length = 126

 Score = 80.6 bits (199), Expect = 3e-19
 Identities = 23/123 (18%), Positives = 42/123 (34%), Gaps = 12/123 (9%)

Query: 25  LHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGV 84
           +     VG  +    FY E  GM+ + K +   +K    +   G ++ H  VE  +N   
Sbjct: 14  VQVAAPVGCEEEARAFYGETIGMEEIPKPEEL-KKRGGCWFKCGNQEIHIGVEQNFNPA- 71

Query: 85  TSYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFEL 144
                     H A     + +  + +  +G  V  +            +V DP G   E 
Sbjct: 72  -------KRAHPAFYVLKIDEFKQELIKQGIEVIDDH-ARPDV--IRFYVSDPFGNRIEF 121

Query: 145 IQR 147
           ++ 
Sbjct: 122 MEN 124

>2qqz_A Glyoxalase family protein, putative; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; HET: MSE; 1.92A {Bacillus anthracis str} Length = 126

 Score = 43.3 bits (102), Expect = 8e-06
 Identities = 18/118 (15%), Positives = 39/118 (33%), Gaps = 16/118 (13%)

Query: 156 QVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVT 215
           QV   VG    +  FY + +GM+ +   ++ + +         +E     + +    GV 
Sbjct: 15  QVAAPVGCEEEARAFYGETIGMEEIPKPEELKKRGGCWFKCGNQE-----IHI----GVE 65

Query: 216 EYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDG 273
           +       A  A     + +  + +     + G ++     + P          DP G
Sbjct: 66  QNFNPAKRAHPAFYVLKIDEFKQEL----IKQGIEVIDDH-ARPD--VIRFYVSDPFG 116

>1twu_A Hypothetical protein YYCE; structural genomics, protein structure initiative, MCSG, DUP of the alpha-beta sandwichs. bacillus subtilis, PSI; 2.00A {Bacillus subtilis} SCOP: d.32.1.8 Length = 139

 Score = 80.4 bits (198), Expect = 6e-19
 Identities = 23/123 (18%), Positives = 39/123 (31%), Gaps = 12/123 (9%)

Query: 30  RVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDI 89
             G LD  I+FY E   +K + +       Y     G      H   E T   G ++  +
Sbjct: 18  PTGQLDEIIRFYEEGLCLKRIGEFSQHNG-YDGVMFGLPHADYHL--EFTQYEGGSTAPV 74

Query: 90  GTGFGHFAIA---TEDVYKLVENIRAKGGNVTREPGPL--KGGTTHIAFVKDPDGYIFEL 144
                          ++  +   ++  G        P    GG T    ++DPDG+    
Sbjct: 75  PHPDSLLVFYVPNAVELAAITSKLKHMGYQEVESENPYWSNGGVT----IEDPDGWRIVF 130

Query: 145 IQR 147
           +  
Sbjct: 131 MNS 133

>1twu_A Hypothetical protein YYCE; structural genomics, protein structure initiative, MCSG, DUP of the alpha-beta sandwichs. bacillus subtilis, PSI; 2.00A {Bacillus subtilis} SCOP: d.32.1.8 Length = 139

 Score = 75.7 bits (186), Expect = 3e-17
 Identities = 24/123 (19%), Positives = 48/123 (39%), Gaps = 6/123 (4%)

Query: 160 RVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTK 219
             G L   I+FYE+ L +K +    +    Y   M G         LE T   G +    
Sbjct: 18  PTGQLDEIIRFYEEGLCLKRIGEFSQH-NGYDGVMFGL--PHADYHLEFTQYEGGSTAPV 74

Query: 220 GNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLV 279
            +  + +     +  + A + + + + +G +        P  +    +  DPDGW+ V +
Sbjct: 75  PHPDSLLVFYVPNAVELAAITSKL-KHMGYQEVESEN--PYWSNGGVTIEDPDGWRIVFM 131

Query: 280 DNE 282
           +++
Sbjct: 132 NSK 134

>3huh_A Virulence protein STM3117; structural genomics, nysgrc, target 13955A1BCT15P1, dioxygenase, PSI-2, protein structure initiative; 1.50A {Salmonella enterica subsp} PDB: 3hnq_A Length = 152

 Score = 78.1 bits (192), Expect = 5e-18
 Identities = 29/127 (22%), Positives = 48/127 (37%), Gaps = 8/127 (6%)

Query: 22  RRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYN 81
            R  H V  V D+  TI+FY E  G   +  +       +   L FG ++ +   +    
Sbjct: 22  DRIDHLVLTVSDISTTIRFYEEVLGFSAVTFKQ------NRKALIFGAQKINLHQQEMEF 75

Query: 82  YGVTSYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIA--FVKDPDG 139
               S           I +  +  +V  I   G ++   P    G T  I   +++DPDG
Sbjct: 76  EPKASRPTPGSADLCFITSTPINDVVSEILQAGISIVEGPVERTGATGEIMSIYIRDPDG 135

Query: 140 YIFELIQ 146
            + E+ Q
Sbjct: 136 NLIEISQ 142

>3huh_A Virulence protein STM3117; structural genomics, nysgrc, target 13955A1BCT15P1, dioxygenase, PSI-2, protein structure initiative; 1.50A {Salmonella enterica subsp} PDB: 3hnq_A Length = 152

 Score = 43.9 bits (103), Expect = 9e-06
 Identities = 22/119 (18%), Positives = 40/119 (33%), Gaps = 12/119 (10%)

Query: 157 VMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTE 216
           ++L V D+  +I+FYE+ LG   +       +K     L +  +      +         
Sbjct: 27  LVLTVSDISTTIRFYEEVLGFSAVT------FKQNRKALIFGAQKINLHQQEMEFEPKAS 80

Query: 217 YTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITS--FVDPDG 273
                +     I++  +      +     + G  I   P    G   +I S    DPDG
Sbjct: 81  RPTPGSADLCFITSTPINDVVSEI----LQAGISIVEGPVERTGATGEIMSIYIRDPDG 135

>3ghj_A Putative integron gene cassette protein; integron cassette protein, mobIle metagenome, structural genomics, PSI-2; 1.47A {Uncultured bacterium} Length = 141

 Score = 74.6 bits (184), Expect = 6e-17
 Identities = 22/128 (17%), Positives = 49/128 (38%), Gaps = 19/128 (14%)

Query: 22  RRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYN 81
           +       +V +L+++ +FYTE  G +          +++  ++  G      + E   N
Sbjct: 27  KGLFEVAVKVKNLEKSSQFYTEILGFEAGLLD--SARRWNFLWVS-GRAGMVVLQEEKEN 83

Query: 82  YGVTSYDIGTGFGHFA--IATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIA--FVKDP 137
           +            HF+  +   ++  L + + +KG +V    GP+          +  DP
Sbjct: 84  WQQQ---------HFSFRVEKSEIEPLKKALESKGVSVH---GPVNQEWMQAVSLYFADP 131

Query: 138 DGYIFELI 145
           +G+  E  
Sbjct: 132 NGHALEFT 139

>3ghj_A Putative integron gene cassette protein; integron cassette protein, mobIle metagenome, structural genomics, PSI-2; 1.47A {Uncultured bacterium} Length = 141

 Score = 41.5 bits (98), Expect = 5e-05
 Identities = 8/34 (23%), Positives = 17/34 (50%)

Query: 157 VMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKY 190
           V ++V +L +S +FY + LG +         + +
Sbjct: 32  VAVKVKNLEKSSQFYTEILGFEAGLLDSARRWNF 65

>1r9c_A Glutathione transferase; fosfomycin resistance protein, Mn binding, antibiotic resist transferase; 1.83A {Mesorhizobium loti} SCOP: d.32.1.2 Length = 139

 Score = 74.5 bits (183), Expect = 9e-17
 Identities = 23/120 (19%), Positives = 40/120 (33%), Gaps = 8/120 (6%)

Query: 26  HAVYRVGDLDRTIKFYTECFGMKLLRKRDVPE-EKYSNAFLGFGPEQSHFVVELTYNYGV 84
           H  + V DL+R  +     F  + +   D  +       F   G       + +    G 
Sbjct: 7   HMTFIVRDLERMTRILEGVFDAREVYASDTEQFSLSREKFFLIGD------IWVAIMQGE 60

Query: 85  TSYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFEL 144
              +       F I   D  +  E +   G ++      ++G    I F  D D ++FEL
Sbjct: 61  KLAERSYNHIAFKIDDADFDRYAERVGKLGLDMRPPRPRVEGEGRSIYF-YDDDNHMFEL 119

>1r9c_A Glutathione transferase; fosfomycin resistance protein, Mn binding, antibiotic resist transferase; 1.83A {Mesorhizobium loti} SCOP: d.32.1.2 Length = 139

 Score = 46.8 bits (111), Expect = 7e-07
 Identities = 18/117 (15%), Positives = 36/117 (30%), Gaps = 10/117 (8%)

Query: 157 VMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTE 216
           +   V DL R  +  E     + +        +++L+   +        + +    G   
Sbjct: 8   MTFIVRDLERMTRILEGVFDAREV--YASDTEQFSLSREKFFLIGD---IWVAIMQGEKL 62

Query: 217 YTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDG 273
             +   +    I   D  + AE V     +LG  +      + G   +   F D D 
Sbjct: 63  AERSYNHIAFKIDDADFDRYAERV----GKLGLDMRPPRPRVEG-EGRSIYFYDDDN 114

>1npb_A Fosfomycin-resistance protein; manganese binding, potassium binding loop, transferase; 2.50A {Serratia marcescens} SCOP: d.32.1.2 Length = 141

 Score = 72.9 bits (179), Expect = 3e-16
 Identities = 24/124 (19%), Positives = 44/124 (35%), Gaps = 11/124 (8%)

Query: 22  RRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYN 81
           +   H    V DL +++ F+ E  G+ L  + +      + A+L  G        +    
Sbjct: 3   QSLNHLTLAVSDLQKSVTFWHELLGLTLHARWN------TGAYLTCGDLWVCLSYDEARQ 56

Query: 82  YGVTSYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYI 141
             V   +       F +A ED   L + +   G  + ++            +  DPDG+ 
Sbjct: 57  -YVPPQESDYTHYAFTVAEEDFEPLSQRLEQAGVTIWKQN----KSEGASFYFLDPDGHK 111

Query: 142 FELI 145
            EL 
Sbjct: 112 LELH 115

>1npb_A Fosfomycin-resistance protein; manganese binding, potassium binding loop, transferase; 2.50A {Serratia marcescens} SCOP: d.32.1.2 Length = 141

 Score = 38.6 bits (90), Expect = 6e-04
 Identities = 9/28 (32%), Positives = 16/28 (57%)

Query: 157 VMLRVGDLGRSIKFYEKALGMKLLRTVD 184
           + L V DL +S+ F+ + LG+ L    +
Sbjct: 8   LTLAVSDLQKSVTFWHELLGLTLHARWN 35

>3ct8_A Protein BH2160, putative glyoxalase; NP_243026.1, glyoxalase/bleomycin resis protein/dioxygenase superfamily, structural genomics; HET: UNL; 2.10A {Bacillus halodurans c-125} Length = 146

 Score = 72.6 bits (178), Expect = 5e-16
 Identities = 26/130 (20%), Positives = 44/130 (33%), Gaps = 12/130 (9%)

Query: 23  RFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNY 82
              H    V  L+ +I F+    G                    +   +++ V   T + 
Sbjct: 20  MLHHVEINVDHLEESIAFWDWLLGELGYEDYQSWSR-----GKSYKHGKTYLVFVQTEDR 74

Query: 83  GVTSY--DIGTGFGHFAIAT---EDVYKLVENIRAKGGNVTREP-GPLKGGTTH-IAFVK 135
             T       TG  H A      E V +L + ++ +G  +  E   P  GG  H   F +
Sbjct: 75  FQTPTFHRKRTGLNHLAFHAASREKVDELTQKLKERGDPILYEDRHPFAGGPNHYAVFCE 134

Query: 136 DPDGYIFELI 145
           DP+    E++
Sbjct: 135 DPNRIKVEIV 144

>3ct8_A Protein BH2160, putative glyoxalase; NP_243026.1, glyoxalase/bleomycin resis protein/dioxygenase superfamily, structural genomics; HET: UNL; 2.10A {Bacillus halodurans c-125} Length = 146

 Score = 42.2 bits (99), Expect = 3e-05
 Identities = 22/119 (18%), Positives = 34/119 (28%), Gaps = 6/119 (5%)

Query: 157 VMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTE 216
           V + V  L  SI F++  LG              +            T           +
Sbjct: 24  VEINVDHLEESIAFWDWLLGELGYEDYQSWSRGKSYKHGKTYLVFVQTEDRFQTPTFHRK 83

Query: 217 YTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIP--GLNTKITSFVDPDG 273
            T  N  A  A S + V +  + +    +E G  I  +       G N       DP+ 
Sbjct: 84  RTGLNHLAFHAASREKVDELTQKL----KERGDPILYEDRHPFAGGPNHYAVFCEDPNR 138

>1xqa_A Glyoxalase/bleomycin resistance protein; dioxygenase, structural GEN midwest center for structural genomics, MCSG; HET: P6G; 1.80A {Bacillus cereus atcc 14579} SCOP: d.32.1.2 Length = 113

 Score = 70.9 bits (174), Expect = 8e-16
 Identities = 25/125 (20%), Positives = 39/125 (31%), Gaps = 19/125 (15%)

Query: 23  RFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNY 82
              H    V D+    +F  + FG+     R        NAF         F++ L    
Sbjct: 3   GIKHLNLTVADVVAAREFLEKYFGLTCSGTRG-------NAFAVMRDN-DGFILTLMKGK 54

Query: 83  GVTSYDIGTGFGHFAIAT---EDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDG 139
            V          H        E V K+ + ++  G     EP       T   +V+ P G
Sbjct: 55  EVQ----YPKTFHVGFPQESEEQVDKINQRLKEDG--FLVEPPKHAHAYT--FYVEAPGG 106

Query: 140 YIFEL 144
           +  E+
Sbjct: 107 FTIEV 111

>1xqa_A Glyoxalase/bleomycin resistance protein; dioxygenase, structural GEN midwest center for structural genomics, MCSG; HET: P6G; 1.80A {Bacillus cereus atcc 14579} SCOP: d.32.1.2 Length = 113

 Score = 42.4 bits (100), Expect = 2e-05
 Identities = 20/119 (16%), Positives = 37/119 (31%), Gaps = 17/119 (14%)

Query: 157 VMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTE 216
           + L V D+  + +F EK  G+    T                 ++   +L L     V +
Sbjct: 7   LNLTVADVVAAREFLEKYFGLTCSGTRGNA--------FAVMRDNDGFILTLMKGKEV-Q 57

Query: 217 YTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWK 275
           Y K         S + V K  + +    +E G  +     +    +        P G+ 
Sbjct: 58  YPKTFHVGFPQESEEQVDKINQRL----KEDGFLVEPPKHA----HAYTFYVEAPGGFT 108

>2rk0_A Glyoxalase/bleomycin resistance protein/dioxygena; 11002Z, glyoxylase, dioxygenas PSI-II; 2.04A {Frankia SP} Length = 136

 Score = 69.7 bits (171), Expect = 5e-15
 Identities = 25/127 (19%), Positives = 39/127 (30%), Gaps = 8/127 (6%)

Query: 26  HAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVT 85
           H    V DLD + ++YTE    K L +     +  S A        S  + E        
Sbjct: 8   HVSLTVRDLDISCRWYTEILDWKELVRGR--GDTTSFAHGVLPGGLSIVLREHDGGGTDL 65

Query: 86  SYDIGTGFGHFAIAT---EDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIF 142
             +   G  H + +     D+  L E +   G   T      +     I   +D D    
Sbjct: 66  FDETRPGLDHLSFSVESMTDLDVLEERLAKAGAAFT---PTQELPFGWILAFRDADNIAL 122

Query: 143 ELIQRGP 149
           E +    
Sbjct: 123 EAMLGRE 129

>2rk0_A Glyoxalase/bleomycin resistance protein/dioxygena; 11002Z, glyoxylase, dioxygenas PSI-II; 2.04A {Frankia SP} Length = 136

 Score = 41.2 bits (97), Expect = 5e-05
 Identities = 11/40 (27%), Positives = 16/40 (40%)

Query: 157 VMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLG 196
           V L V DL  S ++Y + L  K L         +   +L 
Sbjct: 9   VSLTVRDLDISCRWYTEILDWKELVRGRGDTTSFAHGVLP 48

>3ey7_A Biphenyl-2,3-DIOL 1,2-dioxygenase III-related protein; integron cassette protein mobIle metagenome structural genomics, oxidoreductase, PSI-2; HET: MSE; 1.60A {Vibrio cholerae} PDB: 3ey8_A* Length = 133

 Score = 68.8 bits (168), Expect = 9e-15
 Identities = 25/126 (19%), Positives = 47/126 (37%), Gaps = 10/126 (7%)

Query: 22  RRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYN 81
               H V  V D+  T  FY +  GMK +              L FG ++ +   +L   
Sbjct: 9   SHLDHLVLTVADIPTTTNFYEKVLGMKAVSFGAGR------IALEFGHQKINL-HQLGNE 61

Query: 82  YGVTSYDIGTGFGHFA-IATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIA--FVKDPD 138
           +   + ++  G      I    +   ++++  +G  +   P    G    I   + +DPD
Sbjct: 62  FEPKAQNVRVGSADLCFITDTVLSDAMKHVEDQGVTIMEGPVKRTGAQGAITSFYFRDPD 121

Query: 139 GYIFEL 144
           G + E+
Sbjct: 122 GNLIEV 127

>1nki_A Probable fosfomycin resistance protein; potassium binding loop, manganese binding, transferase; 0.95A {Pseudomonas aeruginosa} SCOP: d.32.1.2 PDB: 1lqo_A 1lqk_A 1lqp_A 1nnr_A Length = 135

 Score = 68.7 bits (168), Expect = 1e-14
 Identities = 28/123 (22%), Positives = 37/123 (30%), Gaps = 14/123 (11%)

Query: 22  RRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYN 81
               H    V DL  +I FY +  G +L  + D        A+L  G        E  Y 
Sbjct: 3   TGLNHLTLAVADLPASIAFYRDLLGFRLEARWD------QGAYLELGSLWLCLSREPQYG 56

Query: 82  YGVTSYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYI 141
                Y        F IA  D  +    +RA G                  +  DPDG+ 
Sbjct: 57  GPAADYT----HYAFGIAAADFARFAAQLRAHG----VREWKQNRSEGDSFYFLDPDGHR 108

Query: 142 FEL 144
            E 
Sbjct: 109 LEA 111

>1nki_A Probable fosfomycin resistance protein; potassium binding loop, manganese binding, transferase; 0.95A {Pseudomonas aeruginosa} SCOP: d.32.1.2 PDB: 1lqo_A 1lqk_A 1lqp_A 1nnr_A Length = 135

 Score = 39.0 bits (91), Expect = 4e-04
 Identities = 12/29 (41%), Positives = 15/29 (51%)

Query: 157 VMLRVGDLGRSIKFYEKALGMKLLRTVDK 185
           + L V DL  SI FY   LG +L    D+
Sbjct: 8   LTLAVADLPASIAFYRDLLGFRLEARWDQ 36

>2qnt_A AGR_C_3434P, uncharacterized protein ATU1872; glyoxalase/bleomycin resistance protein/dioxygenase family R protein, PSI-2, MCSG; HET: MSE EPE; 1.40A {Agrobacterium tumefaciens str} Length = 141

 Score = 68.8 bits (168), Expect = 1e-14
 Identities = 29/146 (19%), Positives = 50/146 (34%), Gaps = 13/146 (8%)

Query: 23  RFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNY 82
           RF++ +  V D++R+  FY +  G+K+L         +     GF   +   + E  +  
Sbjct: 8   RFVNPIPFVRDINRSKSFYRDRLGLKILED----FGSFVLFETGFAIHEGRSLEETIWRT 63

Query: 83  GVTSYDI-GTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYI 141
              + +  G           DV    ++I A    +         G        DPDG+ 
Sbjct: 64  SSDAQEAYGRRNMLLYFEHADVDAAFQDI-APHVELIHPLERQAWGQRVF-RFYDPDGHA 121

Query: 142 FELIQRGPTPEPLCQVMLRVGDLGRS 167
            E+       E L Q    +   G S
Sbjct: 122 IEVG------ESLSQSGENLYFQGGS 141

>2qnt_A AGR_C_3434P, uncharacterized protein ATU1872; glyoxalase/bleomycin resistance protein/dioxygenase family R protein, PSI-2, MCSG; HET: MSE EPE; 1.40A {Agrobacterium tumefaciens str} Length = 141

 Score = 53.7 bits (129), Expect = 2e-09
 Identities = 22/121 (18%), Positives = 41/121 (33%), Gaps = 11/121 (9%)

Query: 154 LCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYG 213
               +  V D+ RS  FY   LG+K+L         + L   G+A  +  ++ E  +   
Sbjct: 9   FVNPIPFVRDINRSKSFYRDRLGLKILEDFG----SFVLFETGFAIHEGRSLEETIWRTS 64

Query: 214 V-TEYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPD 272
              +   G     +     DV  + + +         ++            ++  F DPD
Sbjct: 65  SDAQEAYGRRNMLLYFEHADVDAAFQDI-----APHVELIHPLERQAW-GQRVFRFYDPD 118

Query: 273 G 273
           G
Sbjct: 119 G 119

>1mpy_A Catechol 2,3-dioxygenase; extradiol dioxygenase, non heme iron dioxygenase, metapyrocatechase, oxidoreductase; 2.80A {Pseudomonas putida} SCOP: d.32.1.3 d.32.1.3 Length = 307

 Score = 71.0 bits (174), Expect = 2e-14
 Identities = 40/278 (14%), Positives = 78/278 (28%), Gaps = 54/278 (19%)

Query: 26  HAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVT 85
           H   RV D+ + ++ Y E  G+       +  +     +L    E   F + L       
Sbjct: 10  HVQLRVLDMSKALEHYVELLGLIE-----MDRDDQGRVYLKAWTEVDKFSLVLR------ 58

Query: 86  SYDIGTGFGHFAIAT---EDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIF 142
                 G           + + +L  ++ A G  V + P             + P G+ F
Sbjct: 59  -EADEPGMDFMGFKVVDEDALRQLERDLMAYGCAVEQLPAGELNSCGRRVRFQAPSGHHF 117

Query: 143 ELI----------------------QRGPTPEPLCQVMLRVGDLGRSIKFYEKALGMKLL 180
           EL                        +G         ++   +L  +   + K LG  L 
Sbjct: 118 ELYADKEYTGKWGLNDVNPEAWPRDLKGMAAVRFDHALMYGDELPATYDLFTKVLGFYLA 177

Query: 181 RTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAI---STDDVYKSA 237
             V           L        ++    ++     + +      V+    + +D+ ++A
Sbjct: 178 EQVLDENGTRVAQFL--------SLSTKAHDVAFIHHPEKGRLHHVSFHLETWEDLLRAA 229

Query: 238 EVVNLVTQELGGKITRQPGS-IPGLNTKITSFVDPDGW 274
           +++          I   P          I  F DP G 
Sbjct: 230 DLI----SMTDTSIDIGPTRHGLTHGKTIY-FFDPSGN 262

>1mpy_A Catechol 2,3-dioxygenase; extradiol dioxygenase, non heme iron dioxygenase, metapyrocatechase, oxidoreductase; 2.80A {Pseudomonas putida} SCOP: d.32.1.3 d.32.1.3 Length = 307

 Score = 49.1 bits (117), Expect = 6e-07
 Identities = 23/128 (17%), Positives = 40/128 (31%), Gaps = 15/128 (11%)

Query: 22  RRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYN 81
            RF HA+    +L  T   +T+  G  L  +           FL    +         ++
Sbjct: 149 VRFDHALMYGDELPATYDLFTKVLGFYLAEQVLDENGTRVAQFLSLSTK--------AHD 200

Query: 82  YGVTSYDIGTGFGHFAIAT---EDVYKLVENIRAKGGNVTREPG--PLKGGTTHIAFVKD 136
                +       H +      ED+ +  + I     ++   P    L  G T   +  D
Sbjct: 201 VAFIHHPEKGRLHHVSFHLETWEDLLRAADLISMTDTSIDIGPTRHGLTHGKTI--YFFD 258

Query: 137 PDGYIFEL 144
           P G   E+
Sbjct: 259 PSGNRNEV 266

>2p7o_A Glyoxalase family protein; fosfomycin resistance protein, Mn binding, antibiotic resist metal binding protein, hydrolase; 1.44A {Listeria monocytogenes} PDB: 2p7k_A 2p7l_A 2p7m_A 2p7p_A 2p7q_A Length = 133

 Score = 67.5 bits (165), Expect = 3e-14
 Identities = 25/119 (21%), Positives = 46/119 (38%), Gaps = 6/119 (5%)

Query: 26  HAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVT 85
           H    V DL++T  F    F  + +      ++ +S +   F        + +    G +
Sbjct: 7   HITLIVKDLNKTTAFLQNIFNAEEI--YSSGDKTFSLSKEKF---FLIAGLWICIMEGDS 61

Query: 86  SYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFEL 144
             +       F I +E+V +  E I+A G  + +   P   G     +  D D ++FEL
Sbjct: 62  LQERTYNHIAFQIQSEEVDEYTERIKALGVEM-KPERPRVQGEGRSIYFYDFDNHLFEL 119

>2p7o_A Glyoxalase family protein; fosfomycin resistance protein, Mn binding, antibiotic resist metal binding protein, hydrolase; 1.44A {Listeria monocytogenes} PDB: 2p7k_A 2p7l_A 2p7m_A 2p7p_A 2p7q_A Length = 133

 Score = 43.7 bits (103), Expect = 8e-06
 Identities = 16/119 (13%), Positives = 36/119 (30%), Gaps = 14/119 (11%)

Query: 157 VMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTE 216
           + L V DL ++  F +     + +      +  ++L+   +        + +     + E
Sbjct: 8   ITLIVKDLNKTTAFLQNIFNAEEIY--SSGDKTFSLSKEKFFLIAGLW-ICIMEGDSLQE 64

Query: 217 YTKGNAYAQVAISTDDVYKSAEVVNLVTQEL--GGKITRQPGSIPGLNTKITSFVDPDG 273
                 Y  +A          E V+  T+ +   G   +          +   F D D 
Sbjct: 65  ----RTYNHIAFQIQS-----EEVDEYTERIKALGVEMKPERPRVQGEGRSIYFYDFDN 114

>2rbb_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-2, PROT structure initiative; 1.82A {Burkholderia phytofirmans} Length = 141

 Score = 67.3 bits (164), Expect = 4e-14
 Identities = 22/132 (16%), Positives = 43/132 (32%), Gaps = 12/132 (9%)

Query: 19  KDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVP---EEKYSNAFLGFGPEQSHFV 75
           K+     +      D+     FY + FG + +     P         + +GF   +++ +
Sbjct: 4   KNMADLSYVNIFTRDIVAMSAFYQQVFGFQEIESIRSPIFRGLDTGKSCIGFNAHEAYEL 63

Query: 76  VELTYNYGVTSYDIGTGFGHFAIAT---EDVYKLVENIRAKGGNVTREPGPLKGGTTHIA 132
           ++L         +               E V KLV    A G  + + P          A
Sbjct: 64  MQLAQF-----SETSGIKFLLNFDVDTKEAVDKLVPVAIAAGATLIKAPYETYYHWYQ-A 117

Query: 133 FVKDPDGYIFEL 144
            + DP+  +F +
Sbjct: 118 VLLDPERNVFRI 129

>2rbb_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-2, PROT structure initiative; 1.82A {Burkholderia phytofirmans} Length = 141

 Score = 48.4 bits (115), Expect = 2e-07
 Identities = 17/119 (14%), Positives = 36/119 (30%), Gaps = 8/119 (6%)

Query: 157 VMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTE 216
           V +   D+     FY++  G + + ++  P ++           +     EL      +E
Sbjct: 12  VNIFTRDIVAMSAFYQQVFGFQEIESIRSPIFRGLDTGKSCIGFNAHEAYELMQLAQFSE 71

Query: 217 YTKGNAYAQVAISTDDVYKSAEVVNLVTQ--ELGGKITRQPGSIPGLNTKITSFVDPDG 273
            +       +    D       V  LV      G  + + P      +      +DP+ 
Sbjct: 72  TSGI--KFLLNFDVDTK---EAVDKLVPVAIAAGATLIKAPYETYY-HWYQAVLLDPER 124

>3rri_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-biology, midwest center for structu genomics; 1.50A {Alicyclobacillus acidocaldarius subsp} Length = 135

 Score = 66.7 bits (162), Expect = 5e-14
 Identities = 20/132 (15%), Positives = 33/132 (25%), Gaps = 11/132 (8%)

Query: 17  PKKDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVV 76
             ++     H      DLD    FY    G KL R+            +         V 
Sbjct: 3   AMRNPNDVFHLAIPARDLDEAYDFYVTKLGCKLARRYP--------DRITLDFFGDQLVC 54

Query: 77  ELTYNYGVTSYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREP---GPLKGGTTHIAF 133
            L+  +          FG      +    L +  + +G     +               F
Sbjct: 55  HLSDRWDREVSMYPRHFGITFRDKKHFDNLYKLAKQRGIPFYHDLSRRFEGLIEEHETFF 114

Query: 134 VKDPDGYIFELI 145
           + DP   + E  
Sbjct: 115 LIDPSNNLLEFK 126

>1f1u_A Homoprotocatechuate 2,3-dioxygenase; extradiol, manganese, biodegradation, aromatic, oxidoreductase; 1.50A {Arthrobacter globiformis} SCOP: d.32.1.3 d.32.1.3 PDB: 1f1r_A 1f1v_A* 1f1x_A Length = 323

 Score = 70.0 bits (171), Expect = 6e-14
 Identities = 39/264 (14%), Positives = 77/264 (29%), Gaps = 34/264 (12%)

Query: 26  HAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVT 85
           +    V DL ++ +FY +  G+ +  + +      +  +L    E  H  + L    G  
Sbjct: 20  YMEIVVTDLAKSREFYVDVLGLHVTEEDE------NTIYLRSLEEFIHHNLVLR--QGPI 71

Query: 86  SYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELI 145
           +      +     +  +V       +  G    R       G      V+DP G+ +E  
Sbjct: 72  AAVAAFAYR--VKSPAEVDAAEAYYKELGCRTERRKEGFTKGIGDSVRVEDPLGFPYEFF 129

Query: 146 ---------------QRGPTPEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKY 190
                                  L        D+ R   + E  LG ++   +   +   
Sbjct: 130 YETEHVERLTQRYDLYSAGELVRLDHFNQVTPDVPRGRAYLE-DLGFRVSEDIKDSDGVT 188

Query: 191 TLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGK 250
             A +   +    T L            + +  A       ++ +  +   +    +  +
Sbjct: 189 YAAWMHRKQTVHDTAL------TGGNGPRMHHVAFATHEKHNIIQICD--KMGALRISDR 240

Query: 251 ITRQPGSIPGLNTKITSFVDPDGW 274
           I R PG     N      +DPDG 
Sbjct: 241 IERGPGRHGVSNAFYLYILDPDGH 264

>1f1u_A Homoprotocatechuate 2,3-dioxygenase; extradiol, manganese, biodegradation, aromatic, oxidoreductase; 1.50A {Arthrobacter globiformis} SCOP: d.32.1.3 d.32.1.3 PDB: 1f1r_A 1f1v_A* 1f1x_A Length = 323

 Score = 42.3 bits (99), Expect = 9e-05
 Identities = 24/128 (18%), Positives = 45/128 (35%), Gaps = 15/128 (11%)

Query: 22  RRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYN 81
            R  H      D+ R   +  E  G ++       +     A++       H       N
Sbjct: 151 VRLDHFNQVTPDVPRGRAYL-EDLGFRVSEDIKDSDGVTYAAWMHRKQ-TVHDTALTGGN 208

Query: 82  YGVTSYDIGTGFGHFAIAT---EDVYKLVENIRAKGGNVTREPGPLKGGTTHIAF--VKD 136
                   G    H A AT    ++ ++ + + A   +   E GP + G ++  +  + D
Sbjct: 209 --------GPRMHHVAFATHEKHNIIQICDKMGALRISDRIERGPGRHGVSNAFYLYILD 260

Query: 137 PDGYIFEL 144
           PDG+  E+
Sbjct: 261 PDGHRIEI 268

>3zw5_A Glyoxalase domain-containing protein 5; lyase; 1.60A {Homo sapiens} Length = 147

 Score = 66.6 bits (162), Expect = 7e-14
 Identities = 26/127 (20%), Positives = 52/127 (40%), Gaps = 10/127 (7%)

Query: 22  RRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYN 81
           RR  H V  V  +  T  FY++  GM+++  ++          L FG +Q   + E+   
Sbjct: 26  RRLDHIVMTVKSIKDTTMFYSKILGMEVMTFKE------DRKALCFG-DQKFNLHEVGKE 78

Query: 82  YGVTSYDIGTGFGHFA-IATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIA--FVKDPD 138
           +   +     G      I    + +++++++A    +   P P  G    I   + +DPD
Sbjct: 79  FEPKAAHPVPGSLDICLITEVPLEEMIQHLKACDVPIEEGPVPRTGAKGPIMSIYFRDPD 138

Query: 139 GYIFELI 145
             + E+ 
Sbjct: 139 RNLIEVS 145

>3zw5_A Glyoxalase domain-containing protein 5; lyase; 1.60A {Homo sapiens} Length = 147

 Score = 40.8 bits (95), Expect = 9e-05
 Identities = 18/119 (15%), Positives = 38/119 (31%), Gaps = 12/119 (10%)

Query: 157 VMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTE 216
           +++ V  +  +  FY K LGM+++   +          L + ++                
Sbjct: 31  IVMTVKSIKDTTMFYSKILGMEVMTFKEDR------KALCFGDQKFNLHEVGKEFEPKAA 84

Query: 217 YTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITS--FVDPDG 273
           +    +     I+   + +  + +    +     I   P    G    I S  F DPD 
Sbjct: 85  HPVPGSLDICLITEVPLEEMIQHL----KACDVPIEEGPVPRTGAKGPIMSIYFRDPDR 139

>3bqx_A Glyoxalase-related enzyme; VOC superfamily, PSI-2, STRU genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; 1.40A {Fulvimarina pelagi} Length = 150

 Score = 66.6 bits (162), Expect = 7e-14
 Identities = 29/126 (23%), Positives = 50/126 (39%), Gaps = 9/126 (7%)

Query: 22  RRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVEL--- 78
           ++       +GDL+ + +FY E FG   + +           +   G   + ++V+    
Sbjct: 4   QQVAVITLGIGDLEASARFYGEGFGWAPVFRNPEII-----FYQMNGFVLATWLVQNLQE 58

Query: 79  TYNYGVTSYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPD 138
                VTS        H   A  +V  L+E + A GG + R             +V DPD
Sbjct: 59  DVGVAVTSRPGSMALAHNVRAETEVAPLMERLVAAGGQLLRPADA-PPHGGLRGYVADPD 117

Query: 139 GYIFEL 144
           G+I+E+
Sbjct: 118 GHIWEI 123

>3bqx_A Glyoxalase-related enzyme; VOC superfamily, PSI-2, STRU genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; 1.40A {Fulvimarina pelagi} Length = 150

 Score = 52.7 bits (126), Expect = 7e-09
 Identities = 24/121 (19%), Positives = 42/121 (34%), Gaps = 15/121 (12%)

Query: 157 VMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYK----YTLAMLGYAEEDQTTVLELTYNY 212
           + L +GDL  S +FY +  G   +    +  +     + LA        +   + +T   
Sbjct: 9   ITLGIGDLEASARFYGEGFGWAPVFRNPEIIFYQMNGFVLATWLVQNLQEDVGVAVTSRP 68

Query: 213 GVTEYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPD 272
           G        A A    +  +V    E +       GG++ R   + P    +     DPD
Sbjct: 69  G------SMALAHNVRAETEVAPLMERL----VAAGGQLLRPADAPPHGGLRGY-VADPD 117

Query: 273 G 273
           G
Sbjct: 118 G 118

>1jc4_A Methylmalonyl-COA epimerase; vicinal oxygen chelate superfamily, isomerase; 2.00A {Propionibacterium freudenreichiisubsp} SCOP: d.32.1.4 PDB: 1jc5_A Length = 148

 Score = 66.2 bits (161), Expect = 1e-13
 Identities = 31/137 (22%), Positives = 49/137 (35%), Gaps = 14/137 (10%)

Query: 23  RFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFL--GFGPEQSHFVVELTY 80
              H  Y   D D   K+Y E FG   L + + PE+      +       +    V++  
Sbjct: 9   CIDHVAYACPDADEASKYYQETFGWHELHREENPEQGVVEIMMAPAAKLTEHMTQVQVMA 68

Query: 81  NYGVTS--------YDIGTGFGHFAIATEDVYKLVENIRAKGGNV-TREPGPLKGGTTHI 131
                S        ++   G  H A   +D+  +   +R +G  +   EP    GG   I
Sbjct: 69  PLNDESTVAKWLAKHNGRAGLHHMAWRVDDIDAVSATLRERGVQLLYDEPKLGTGGNR-I 127

Query: 132 AFV--KDPDGYIFELIQ 146
            F+  K   G + EL Q
Sbjct: 128 NFMHPKSGKGVLIELTQ 144

>1jc4_A Methylmalonyl-COA epimerase; vicinal oxygen chelate superfamily, isomerase; 2.00A {Propionibacterium freudenreichiisubsp} SCOP: d.32.1.4 PDB: 1jc5_A Length = 148

 Score = 39.3 bits (91), Expect = 4e-04
 Identities = 19/134 (14%), Positives = 43/134 (32%), Gaps = 16/134 (11%)

Query: 156 QVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAML--GYAEEDQTTVLELTYNYG 213
            V     D   + K+Y++  G   L   + PE      M+       +  T +++     
Sbjct: 12  HVAYACPDADEASKYYQETFGWHELHREENPEQGVVEIMMAPAAKLTEHMTQVQVMAPLN 71

Query: 214 --------VTEYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKI 265
                   + ++        +A   DD+   +       +E G ++      +     +I
Sbjct: 72  DESTVAKWLAKHNGRAGLHHMAWRVDDIDAVSA----TLRERGVQLLYDEPKLGTGGNRI 127

Query: 266 TSFVDP-DGWKTVL 278
             F+ P  G   ++
Sbjct: 128 N-FMHPKSGKGVLI 140

>2pjs_A AGR_C_3564P, uncharacterized protein ATU1953; glyoxalase/bleomycin resistance protein/dioxygenase superfamily, structural genomics; 1.85A {Agrobacterium tumefaciens str} SCOP: d.32.1.2 Length = 119

 Score = 64.4 bits (157), Expect = 3e-13
 Identities = 22/126 (17%), Positives = 39/126 (30%), Gaps = 13/126 (10%)

Query: 23  RFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNY 82
           R + A     +  R   FY +  GM +                   P ++H  V      
Sbjct: 7   RRVVANIATPEPARAQAFYGDILGMPVAMDHGWI------VTHA-SPLEAHAQVSFAREG 59

Query: 83  GVTSYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIF 142
           G      GT     +I  ++  ++   I   G  +   P     G     F++DP G + 
Sbjct: 60  GS-----GTDVPDLSIEVDNFDEVHARILKAGLPIEYGPVTEAWGVQR-LFLRDPFGKLI 113

Query: 143 ELIQRG 148
            ++   
Sbjct: 114 NILSHA 119

>2pjs_A AGR_C_3564P, uncharacterized protein ATU1953; glyoxalase/bleomycin resistance protein/dioxygenase superfamily, structural genomics; 1.85A {Agrobacterium tumefaciens str} SCOP: d.32.1.2 Length = 119

 Score = 38.2 bits (89), Expect = 4e-04
 Identities = 19/116 (16%), Positives = 32/116 (27%), Gaps = 17/116 (14%)

Query: 158 MLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEY 217
            +   +  R+  FY   LGM +    D               E    V          E 
Sbjct: 12  NIATPEPARAQAFYGDILGMPVAM--DHGWI----VTHASPLEAHAQVSFA------REG 59

Query: 218 TKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDG 273
             G     ++I  D+  +    +     + G  I   P +      ++    DP G
Sbjct: 60  GSGTDVPDLSIEVDNFDEVHARI----LKAGLPIEYGPVTEAWGVQRLF-LRDPFG 110

>3hpy_A Catechol 2,3-dioxygenase; repeated motifs, aromatic hydrocarbons catabolism, iron, oxidoreductase; 1.94A {Pseudomonas SP} PDB: 3hpv_A 3hq0_A* Length = 309

 Score = 67.6 bits (165), Expect = 3e-13
 Identities = 37/212 (17%), Positives = 62/212 (29%), Gaps = 40/212 (18%)

Query: 22  RRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYN 81
            R  HA  RV +L+  I FY    G+          +     +     E+ H    +   
Sbjct: 7   LRPGHAQVRVLNLEEGIHFYRNVLGLVE-----TGRDDQGRVYFKCWDERDHSCYIIR-- 59

Query: 82  YGVTSYDIGTGFGHFAIAT---EDVYKLVENIRAKGGNVTREP-GPLKGGTTHIAFVKDP 137
                     G   F         + KL  +++A G   TR P G +      + F + P
Sbjct: 60  -----EADTAGIDFFGFKVLDKATLEKLDADLQAYGLTTTRIPAGEMLETGERVRF-ELP 113

Query: 138 DGYIFELI----------------------QRGPTPEPLCQVMLRVGDLGRSIKFYEKAL 175
            G++ EL                       + G  P  L   +L   ++    K + + L
Sbjct: 114 SGHLIELYAEKTCVGNGISEVNPAPWNAQREHGIAPIQLDHCLLYGPNIAEVQKIFTEVL 173

Query: 176 GMKL-LRTVDKPEYKYTLAMLGYAEEDQTTVL 206
           G  L  R +           L  + +      
Sbjct: 174 GFYLVERVLSPDGDSDMGIWLSCSHKVHDIAF 205

>3lm4_A Catechol 2,3-dioxygenase; NYSGXRC, PSI-II, protein structure initiative, 2hydroxyl 6 OXO 6 phenyl hexa 2-4 dienoic acid, peroxide; HET: HPX; 1.80A {Rhodococcus jostii} Length = 339

 Score = 67.7 bits (165), Expect = 4e-13
 Identities = 21/178 (11%), Positives = 54/178 (30%), Gaps = 36/178 (20%)

Query: 26  HAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVT 85
            A         T+ F+T+  GM +  +         + +L    +   + +++T      
Sbjct: 14  RAELFSPKPQETLDFFTKFLGMYVTHREG------QSVYLRGYEDPYPWSLKIT--EAPE 65

Query: 86  SYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELI 145
           +            + E + +  +++     + T        G     + + PDG+  +L+
Sbjct: 66  AGMGHAAMR--TSSPEALERRAKSLTDGNVDGTWSEDQFGYG-KTFEY-QSPDGHNLQLL 121

Query: 146 ------------------------QRGPTPEPLCQVMLRVGDLGRSIKFYEKALGMKL 179
                                    +G   + +  + L   D+      +E+ LG + 
Sbjct: 122 WEAEKYVAPPELRSKILTRPSKKPLQGIPVKRIDHLNLMSSDVTAVKDSFERHLGFRT 179

>3lm4_A Catechol 2,3-dioxygenase; NYSGXRC, PSI-II, protein structure initiative, 2hydroxyl 6 OXO 6 phenyl hexa 2-4 dienoic acid, peroxide; HET: HPX; 1.80A {Rhodococcus jostii} Length = 339

 Score = 46.2 bits (109), Expect = 6e-06
 Identities = 23/128 (17%), Positives = 33/128 (25%), Gaps = 14/128 (10%)

Query: 22  RRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYN 81
           +R  H      D+      +    G +   +R V       A++                
Sbjct: 152 KRIDHLNLMSSDVTAVKDSFERHLGFR-TTERVVDGNVEIGAWMSSNLLGHEVACMRDMT 210

Query: 82  YGVTSYDIGTGFGHFAIAT---EDVYKLVENIRAKGGNVTREPGPLKGGTTHIAF--VKD 136
            G           H A      +     VE  R     +   P   K G T   F  V +
Sbjct: 211 GG------HGKLHHLAFFYGTGQHNIDAVEMFRDYDIQIEAGPD--KHGITQSQFLYVFE 262

Query: 137 PDGYIFEL 144
           P G   EL
Sbjct: 263 PGGNRIEL 270

>3eck_A Protein (homoprotocatechuate 2,3-dioxygenase); oxidoreductase, extradiol, FEII, crystal packing; HET: XXG; 1.60A {Brevibacterium fuscum} SCOP: d.32.1.3 d.32.1.3 PDB: 3ecj_A* 3ojn_A* 1q0o_A 1q0c_A 2iga_A* 2ig9_A 3ojj_A* 3bza_A* 3ojk_A* 3ojt_A* Length = 365

 Score = 67.4 bits (164), Expect = 5e-13
 Identities = 45/264 (17%), Positives = 77/264 (29%), Gaps = 34/264 (12%)

Query: 26  HAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVT 85
           +A   V DL ++  FY +  G+ +  + +      +  +L    E  H  + LT   G  
Sbjct: 20  YAELVVTDLAKSRNFYVDVLGLHVSYEDE------NQIYLRSFEEFIHHNLVLT--KGPV 71

Query: 86  SYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELI 145
           +      F       EDV K     +  G    R       G      V+DP G+ +E  
Sbjct: 72  AALKAMAFR--VRTPEDVDKAEAYYQELGCRTERRKDGFVKGIGDALRVEDPLGFPYEFF 129

Query: 146 ---------------QRGPTPEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKY 190
                                  L        D+ R  K+ E  LG ++   +   E   
Sbjct: 130 FETTHVERLHMRYDLYSAGELVRLDHFNQVTPDVPRGRKYLED-LGFRVTEDIQDDEGTT 188

Query: 191 TLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGK 250
             A +        T              + +  A       ++ +  +   +    +  +
Sbjct: 189 YAAWMHRKGTVHDTA------LTGGNGPRLHHVAFSTHEKHNIIQICD--KMGALRISDR 240

Query: 251 ITRQPGSIPGLNTKITSFVDPDGW 274
           I R PG     N      +DPD  
Sbjct: 241 IERGPGRHGVSNAFYLYILDPDNH 264

>3pkv_A Toxoflavin lyase (TFLA); metalloenzyme, vicinal oxygen chelate superfamily; 1.34A {Paenibacillus polymyxa} PDB: 3pkw_A 3pkx_A* 3oul_A 3oum_A* Length = 252

 Score = 65.1 bits (158), Expect = 1e-12
 Identities = 31/180 (17%), Positives = 55/180 (30%), Gaps = 32/180 (17%)

Query: 22  RRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYN 81
                      +LDR + FYT   G + + ++           +  G  Q  F       
Sbjct: 25  TSIKQLTLYTAELDRMLAFYTNMLGAQHVHEQA------DAFTIQLGVSQIQF------- 71

Query: 82  YGVTSYDIGTGFGHFA--IATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIA---FVKD 136
               + D    F H A  IA     +    +   G  +T             A   +V+D
Sbjct: 72  --RAAADGTKPFYHIAINIAANHFQEGKAWLSGFGELLTENDEDQAYFPFFNAYSCYVED 129

Query: 137 PDGYIFELIQRGPTPEP------------LCQVMLRVGDLGRSIKFYEKALGMKLLRTVD 184
           P G I ELI R                  + ++ +   D+ ++    ++A     L  ++
Sbjct: 130 PSGNIIELISRQQAAPVLDKPFSADQLLSIGEINITTSDVEQAATRLKQAELPVKLDQIE 189

>1zsw_A Metallo protein, glyoxalase family protein; hypothetical protein from glyoxalase family, structural GENO PSI, protein structure initiative; 1.65A {Bacillus cereus} SCOP: d.32.1.10 d.32.1.10 Length = 338

 Score = 64.7 bits (157), Expect = 4e-12
 Identities = 27/181 (14%), Positives = 49/181 (27%), Gaps = 24/181 (13%)

Query: 26  HAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNY--G 83
           H      + +    FY    G++ + K  V ++  S   L +G +      EL++     
Sbjct: 33  HISMVTKNANENNHFYKNVLGLRRV-KMTVNQDDPSMYHLFYGDKTGSPGTELSFFEIPL 91

Query: 84  VTSYDIGTG-FGHFAIATEDVYKLVE-NIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYI 141
           V     GT       +       L     R +  +V             + F +D +G  
Sbjct: 92  VGRTYRGTNAITRIGLLVPSEDSLHYWKERFEKFDVKHSEMTTYANRPALQF-EDAEGLR 150

Query: 142 FELIQRGPTPEPLCQ------------------VMLRVGDLGRSIKFYEKALGMKLLRTV 183
             L+          +                  V L V  L +      +  G   +   
Sbjct: 151 LVLLVSNGEKVEHWETWEKSEVPAKHQIQGMGSVELTVRRLDKMASTLTEIFGYTEVSRN 210

Query: 184 D 184
           D
Sbjct: 211 D 211

>1zsw_A Metallo protein, glyoxalase family protein; hypothetical protein from glyoxalase family, structural GENO PSI, protein structure initiative; 1.65A {Bacillus cereus} SCOP: d.32.1.10 d.32.1.10 Length = 338

 Score = 53.1 bits (127), Expect = 3e-08
 Identities = 23/132 (17%), Positives = 41/132 (31%), Gaps = 12/132 (9%)

Query: 21  KRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTY 80
            +        V  LD+     TE FG        V        F     E    +V    
Sbjct: 178 IQGMGSVELTVRRLDKMASTLTEIFGYTE-----VSRNDQEAIFQSIKGEAFGEIVVKYL 232

Query: 81  NYGVTSYDIGTGFGHFAIAT---EDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDP 137
           +        G    H AI      ++    E ++ +G + +   G +        + ++ 
Sbjct: 233 DGPTEKPGRG-SIHHLAIRVKNDAELAYWEEQVKQRGFHSS---GIIDRFYFKSLYFRES 288

Query: 138 DGYIFELIQRGP 149
           +G +FE+   GP
Sbjct: 289 NGILFEIATDGP 300

>3itw_A Protein TIOX; bleomycin resistance fold, bisintercalator, solvent-exposed residue, thiocoraline, protein binding, peptide binding Pro; 2.15A {Micromonospora SP} Length = 137

 Score = 60.6 bits (147), Expect = 1e-11
 Identities = 24/124 (19%), Positives = 42/124 (33%), Gaps = 4/124 (3%)

Query: 30  RVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDI 89
              D DR + +    FG +LL ++        +A L  G      +V  T      S   
Sbjct: 9   AYTDPDRAVDWLVRVFGFRLLLRQP-AIGTIRHADLDTG--GGIVMVRRTGEPYTVSCAG 65

Query: 90  GTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRGP 149
           G       +   DV +      A G ++ +       G      V+D +G+++E  +   
Sbjct: 66  GHTCKQVIVWVSDVDEHFMRSTAAGADIVQPLQDKPWG-LRQYLVRDLEGHLWEFTRHLR 124

Query: 150 TPEP 153
              P
Sbjct: 125 DVPP 128

>3itw_A Protein TIOX; bleomycin resistance fold, bisintercalator, solvent-exposed residue, thiocoraline, protein binding, peptide binding Pro; 2.15A {Micromonospora SP} Length = 137

 Score = 41.3 bits (97), Expect = 5e-05
 Identities = 20/117 (17%), Positives = 33/117 (28%), Gaps = 8/117 (6%)

Query: 157 VMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTE 216
           V L   D  R++ +  +  G +LL            A L         ++  T       
Sbjct: 6   VELAYTDPDRAVDWLVRVFGFRLLLRQPAIG-TIRHADLDTG--GGIVMVRRTGEPYTVS 62

Query: 217 YTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDG 273
              G+   QV +   DV +            G  I +     P    +     D +G
Sbjct: 63  CAGGHTCKQVIVWVSDVDEHFMRS----TAAGADIVQPLQDKPW-GLRQYLVRDLEG 114

>3b59_A Glyoxalase/bleomycin resistance protein/dioxygena; 11004Z, NYSGXRC, PSI-2, structural genomics, Pro structure initiative; 2.53A {Novosphingobium aromaticivorans} Length = 310

 Score = 62.6 bits (152), Expect = 2e-11
 Identities = 40/169 (23%), Positives = 66/169 (39%), Gaps = 27/169 (15%)

Query: 26  HAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFL-GFGPEQSHFVVELTYNYGV 84
           +  Y V D D    FY + +G++ + +        +NA+    G ++ H VV+L      
Sbjct: 11  YVGYGVKDFDAEKAFYADVWGLEPVGEDA------NNAWFKAQGADE-HHVVQLR--RAD 61

Query: 85  TSYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPL--KGGTTHIAFVKDPDGYIF 142
            +          A +  DV  L  ++ A G  V  EP  L   GG     F   PDG +F
Sbjct: 62  ENRIDVIALA--ADSRSDVDALRASVEAAGCKVASEPAVLATPGGGYGFRFF-SPDGLLF 118

Query: 143 EL-----------IQRGPT-PEPLCQVMLRVGDLGRSIKFYEKALGMKL 179
           E+           + R    P  +  ++L   +    +KF+   LG K+
Sbjct: 119 EVSSDVAKGAKRDLARWEGVPVKISHIVLHSPNHQDMVKFFTDVLGFKV 167

>3b59_A Glyoxalase/bleomycin resistance protein/dioxygena; 11004Z, NYSGXRC, PSI-2, structural genomics, Pro structure initiative; 2.53A {Novosphingobium aromaticivorans} Length = 310

 Score = 40.2 bits (94), Expect = 4e-04
 Identities = 21/129 (16%), Positives = 41/129 (31%), Gaps = 24/129 (18%)

Query: 22  RRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPE-QSHFVVELTY 80
            +  H V    +    +KF+T+  G K+    D   +     FL          ++    
Sbjct: 140 VKISHIVLHSPNHQDMVKFFTDVLGFKV---SDWLGDFM--CFLRCNSAHHRIAILPGP- 193

Query: 81  NYGVTSYDIGTGFGHFAIAT---EDVYKLVENIRAKGGNVTREPGPLKGGTTHIAF--VK 135
                         H A      +D+ +    ++ KG ++   PG  +    +  F    
Sbjct: 194 ----------PCLNHVAYDMLSVDDMMRGAHRLKVKGIDIGWGPG--RHTAGNNTFSYFV 241

Query: 136 DPDGYIFEL 144
            P G++ E 
Sbjct: 242 TPGGFVTEY 250

>2i7r_A Conserved domain protein; structural genomics conserved domain, PSI-2, protein structure initiative; 2.20A {Streptococcus pneumoniae} SCOP: d.32.1.2 Length = 118

 Score = 59.0 bits (143), Expect = 2e-11
 Identities = 20/126 (15%), Positives = 35/126 (27%), Gaps = 14/126 (11%)

Query: 23  RFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEE-KYSNAFLGFGPEQSHFVVELTYN 81
                   V ++ +           K     D   +    +  L     Q+H V    + 
Sbjct: 5   NLNQLDIIVSNVPQVCADLEHILDKKADYANDGFAQFTIGSHCLMLS--QNHLVPLENFQ 62

Query: 82  YGVTSYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYI 141
            G+             I  EDV +  + +   G  V   P     GT     V+ P G +
Sbjct: 63  SGII----------IHIEVEDVDQNYKRLNELGIKVLHGPTVTDWGTES-LLVQGPAGLV 111

Query: 142 FELIQR 147
            +  + 
Sbjct: 112 LDFYRM 117

>2i7r_A Conserved domain protein; structural genomics conserved domain, PSI-2, protein structure initiative; 2.20A {Streptococcus pneumoniae} SCOP: d.32.1.2 Length = 118

 Score = 45.6 bits (108), Expect = 1e-06
 Identities = 24/121 (19%), Positives = 43/121 (35%), Gaps = 18/121 (14%)

Query: 154 LCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAE-EDQTTVLELTYNY 212
           L Q+ + V ++ +     E  L  K     D           G+A+    +  L L+ N+
Sbjct: 6   LNQLDIIVSNVPQVCADLEHILDKKADYAND-----------GFAQFTIGSHCLMLSQNH 54

Query: 213 GVTEYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPD 272
            V      +    + I  +DV ++ + +     ELG K+   P       T+      P 
Sbjct: 55  LVPLENFQSG-IIIHIEVEDVDQNYKRL----NELGIKVLHGPTVTDW-GTESLLVQGPA 108

Query: 273 G 273
           G
Sbjct: 109 G 109

>2a4x_A Mitomycin-binding protein; ALFA/beta protein, mitomycin C-binding protein, bleomycin A2, antimicrobial protein; HET: BLM; 1.40A {Streptomyces caespitosus} SCOP: d.32.1.2 PDB: 2a4w_A* 1kmz_A 1kll_A* Length = 138

 Score = 59.1 bits (143), Expect = 3e-11
 Identities = 24/131 (18%), Positives = 42/131 (32%), Gaps = 8/131 (6%)

Query: 23  RFLHAVYRVGDLDRTIKFYTECFGMKLLRKRD----VPEEKYSNAFLGFGPEQSHFVVEL 78
           R       V D+ ++++FY +  G+++  + D              L +       V   
Sbjct: 4   RISLFAVVVEDMAKSLEFYRK-LGVEIPAEADSAPHTEAVLDGGIRLAWDTV--ETVRSY 60

Query: 79  TYNYGVTSYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPD 138
              +   +             T  V K    +   G     +P     G  + A VKDPD
Sbjct: 61  DPEWQAPTGGHRFAIAFEFPDTASVDKKYAELVDAGYEGHLKPWNAVWGQRY-AIVKDPD 119

Query: 139 GYIFELIQRGP 149
           G + +L    P
Sbjct: 120 GNVVDLFAPLP 130

>2a4x_A Mitomycin-binding protein; ALFA/beta protein, mitomycin C-binding protein, bleomycin A2, antimicrobial protein; HET: BLM; 1.40A {Streptomyces caespitosus} SCOP: d.32.1.2 PDB: 2a4w_A* 1kmz_A 1kll_A* Length = 138

 Score = 38.3 bits (89), Expect = 5e-04
 Identities = 20/118 (16%), Positives = 40/118 (33%), Gaps = 4/118 (3%)

Query: 156 QVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVT 215
              + V D+ +S++FY   LG+++    D   +     + G       TV  +       
Sbjct: 7   LFAVVVEDMAKSLEFYR-KLGVEIPAEADSAPH-TEAVLDGGIRLAWDTVETVRSYDPEW 64

Query: 216 EYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDG 273
           +   G     +A    D     +    +  + G +   +P +      +     DPDG
Sbjct: 65  QAPTGGHRFAIAFEFPDTASVDKKYAEL-VDAGYEGHLKPWNAVW-GQRYAIVKDPDG 120

>3g12_A Putative lactoylglutathione lyase; glyoxalase, bleomycin resistance, PSI-2, NYSGXRC, structural genomics; 2.58A {Bdellovibrio bacteriovorus HD100} Length = 128

 Score = 57.7 bits (139), Expect = 7e-11
 Identities = 20/125 (16%), Positives = 31/125 (24%), Gaps = 12/125 (9%)

Query: 23  RFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNY 82
                      L   + FY    G +    +     +   A              L    
Sbjct: 6   LITSITINTSHLQGMLGFY-RIIGFQFTASKVDKGSEVHRAVHN------GVEFSLYSIQ 58

Query: 83  GVTSYDIGTGFGHFAIATEDVYKLVENIRAKGG-NVTREPGPLKGGTTHIAFVKDPDGYI 141
                              D+ K V+ +    G     +P  +  G    A V DPDG+ 
Sbjct: 59  NPQRS--QIPSLQLGFQITDLEKTVQELVKIPGAMCILDPTDMPDG--KKAIVLDPDGHS 114

Query: 142 FELIQ 146
            EL +
Sbjct: 115 IELCE 119

>3g12_A Putative lactoylglutathione lyase; glyoxalase, bleomycin resistance, PSI-2, NYSGXRC, structural genomics; 2.58A {Bdellovibrio bacteriovorus HD100} Length = 128

 Score = 43.8 bits (103), Expect = 6e-06
 Identities = 18/118 (15%), Positives = 35/118 (29%), Gaps = 14/118 (11%)

Query: 156 QVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVT 215
            + +    L   + FY   +G +   +      +   A+             L Y+    
Sbjct: 9   SITINTSHLQGMLGFYR-IIGFQFTASKVDKGSEVHRAVHN------GVEFSL-YSIQNP 60

Query: 216 EYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDG 273
           +        Q+     D+    + V  + +  G      P  +P     I   +DPDG
Sbjct: 61  Q-RSQIPSLQLGFQITDL---EKTVQELVKIPGAMCILDPTDMPDGKKAI--VLDPDG 112

>1sp8_A 4-hydroxyphenylpyruvate dioxygenase; oxidoreductase; 2.00A {Zea mays} SCOP: d.32.1.3 d.32.1.3 Length = 418

 Score = 60.7 bits (146), Expect = 1e-10
 Identities = 40/287 (13%), Positives = 76/287 (26%), Gaps = 51/287 (17%)

Query: 22  RRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYN 81
             F H      D       ++   G  L  + D+     ++A L        F+    Y 
Sbjct: 30  LAFHHVELWCADAASAAGRFSFGLGAPLAARSDLSTGNSAHASLLLRSGSLSFLFTAPYA 89

Query: 82  YGVTSYDI-----------------GTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPL 124
           +G  +                    G      A+   D         A G      P  L
Sbjct: 90  HGADAATAALPSFSAAAARRFAADHGLAVRAVALRVADAEDAFRASVAAGARPAFGPVDL 149

Query: 125 KG----------GTTHIAFVKDPDGYI-------FELIQRGPTPEP----LCQVMLRVGD 163
                       G   + +V  PDG         FE +      +        ++  V +
Sbjct: 150 GRGFRLAEVELYGDVVLRYVSYPDGAAGEPFLPGFEGVASPGAADYGLSRFDHIVGNVPE 209

Query: 164 LGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGY-AEEDQTTVLELTYNYGVT------- 215
           L  +  ++    G          +     + L      + +  + L  N  V        
Sbjct: 210 LAPAAAYFAGFTGFHEFAEFTTEDVGTAESGLNSMVLANNSENVLLPLNEPVHGTKRRSQ 269

Query: 216 -----EYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGS 257
                ++  G     +A+++DDV ++   +   +   G +    P S
Sbjct: 270 IQTFLDHHGGPGVQHMALASDDVLRTLREMQARSAMGGFEFMAPPTS 316

>1lgt_A Biphenyl-2,3-DIOL 1,2-dioxygenase; extradiol dioxygenase, 2,3-dihydroxybiphenyl, non-heme iron, anaerobic, PCB biodegradation; HET: BP3; 1.70A {Burkholderia xenovorans} SCOP: d.32.1.3 d.32.1.3 PDB: 1kmy_A* 1knd_A 1knf_A 1han_A* 1lkd_A* Length = 297

 Score = 59.5 bits (144), Expect = 2e-10
 Identities = 26/178 (14%), Positives = 49/178 (27%), Gaps = 40/178 (22%)

Query: 26  HAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVT 85
           +  + V D+     F T+  G+      D      +            + + +       
Sbjct: 7   YMGFAVSDVAAWRSFLTQKLGLMEAGTTD------NGDLFRIDSR--AWRIAVQ------ 52

Query: 86  SYDIGTGFGHFAIAT---EDVYKLVENIRAKGGNVTREPGPL---KGGTTHIAFVKDPDG 139
                               + ++ + ++  G  VT     L   +G T  I F  DP G
Sbjct: 53  -QGEVDDLAFAGYEVADAAGLAQMADKLKQAGIAVTTGDASLARRRGVTGLITFA-DPFG 110

Query: 140 YIFELI------------------QRGPTPEPLCQVMLRVGDLGRSIKFYEKALGMKL 179
              E+                         + L   +  V D  +++ FY   LG +L
Sbjct: 111 LPLEIYYGASEVFEKPFLPGAAVSGFLTGEQGLGHFVRCVPDSDKALAFYTDVLGFQL 168

>3gm5_A Lactoylglutathione lyase and related lyases; sheet-helix-sheet-sheet-sheet motif, isomerase; HET: CIT; 2.00A {Thermoanaerobacter tengcongensis} Length = 159

 Score = 56.4 bits (136), Expect = 4e-10
 Identities = 31/147 (21%), Positives = 55/147 (37%), Gaps = 29/147 (19%)

Query: 22  RRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVP--------------EEKYSNAFLGF 67
           R  +     V D++ +++ Y E FG++  +                   + +   AF   
Sbjct: 18  RNTVQIGIVVRDIEESLQNYAEFFGVEKPQWFWTDDYSKAHTKFNGRPTKARAKLAFFEL 77

Query: 68  GPEQSHFVVELTYNYGVTSY------DIGTGFGHFAIATEDVYKLVENIRAKGGNVTREP 121
           GP Q    +EL       S         G G  H A   +D+ + VE +  KG  V ++ 
Sbjct: 78  GPLQ----LELIEPDENPSTWREFLDKNGEGIHHIAFVVKDMDRKVEELYRKGMKVIQK- 132

Query: 122 GPLKGGTTHIAFV--KDPDGYIFELIQ 146
           G  +GG    A++        + EL++
Sbjct: 133 GDFEGG--RYAYIDTLRALKVMIELLE 157

>3oaj_A Putative ring-cleaving dioxygenase MHQO; structural genomics, protein structure initiative, PSI-biolo unknown function; 1.40A {Bacillus subtilis subsp} Length = 335

 Score = 57.4 bits (138), Expect = 1e-09
 Identities = 23/178 (12%), Positives = 47/178 (26%), Gaps = 23/178 (12%)

Query: 26  HAVYRVGDLDRTIKFYTECFGMKLLRK---RDVPEEKYSNAFLGFGPEQSHFVVELTYNY 82
           H    VG       FY    G++L+++    D P   +       G   +          
Sbjct: 11  HITAIVGHPQENTDFYAGVLGLRLVKQTVNFDDPGTYHLYFGNEGGKPGTIITFFPWAGA 70

Query: 83  GVTSYDIGT-GFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYI 141
                  G  G   + +    +    + +       T      + G  ++ F  DP G  
Sbjct: 71  RQGVIGDGQVGVTSYVVPKGAMAFWEKRLEKFNVPYT---KIERFGEQYVEF-DDPHGLH 126

Query: 142 FELIQRGPTPEPLCQ---------------VMLRVGDLGRSIKFYEKALGMKLLRTVD 184
            E+++R                          L      ++    E  +G++ +    
Sbjct: 127 LEIVEREEGEANTWTFGEVTPDVAIKGFGGATLLSEQPDKTADLLENIMGLERVGKEG 184

>3oaj_A Putative ring-cleaving dioxygenase MHQO; structural genomics, protein structure initiative, PSI-biolo unknown function; 1.40A {Bacillus subtilis subsp} Length = 335

 Score = 51.3 bits (122), Expect = 1e-07
 Identities = 20/136 (14%), Positives = 35/136 (25%), Gaps = 13/136 (9%)

Query: 17  PKKDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVV 76
           P    + F  A       D+T        G++ + K                 +  + + 
Sbjct: 147 PDVAIKGFGGATLLSEQPDKTADLLENIMGLERVGKEG------DFVRYRSAGDIGNVID 200

Query: 77  ELTYNYGVTSYDIGTGFGHFAIATED---VYKLVENIRAKGGNVTREPGPLKGGTTHIAF 133
                 G      GT   H A    D          I + G  VT           +  +
Sbjct: 201 LKLTPIGRGQMGAGT-VHHIAWRANDDEDQLDWQRYIASHGYGVT---PVRDRNYFNAIY 256

Query: 134 VKDPDGYIFELIQRGP 149
            ++    +FE+    P
Sbjct: 257 FREHGEILFEIATDPP 272

>2zyq_A Probable biphenyl-2,3-DIOL 1,2-dioxygenase BPHC; extradiol, DHSA, TB, catechol, cholesterol, steroid, aromatic hydrocarbons catabolism; HET: TAR; 2.00A {Mycobacterium tuberculosis} PDB: 2zi8_A* Length = 300

 Score = 55.4 bits (133), Expect = 4e-09
 Identities = 24/176 (13%), Positives = 47/176 (26%), Gaps = 29/176 (16%)

Query: 22  RRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYN 81
           R   +      D+    ++  +  GM                +L      +  VV    +
Sbjct: 4   RSLGYLRIEATDMAAWREYGLKVLGMVE-----GKGAPEGALYLRMDDFPARLVVVPGEH 58

Query: 82  YGVTSYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKG--GTTHIAFVKDPDG 139
             +         G      E + ++   +  +G                  +    DP G
Sbjct: 59  DRL------LEAGWECANAEGLQEIRNRLDLEGTPYKEATAAELADRRVDEMIRFADPSG 112

Query: 140 YIFELI-------QRGPTPEP---------LCQVMLRVGDLGRSIKFYEKALGMKL 179
              E+        +R  +P           +  V+L   D   ++ FY   LG +L
Sbjct: 113 NCLEVFHGTALEHRRVVSPYGHRFVTGEQGMGHVVLSTRDDAEALHFYRDVLGFRL 168

>2zyq_A Probable biphenyl-2,3-DIOL 1,2-dioxygenase BPHC; extradiol, DHSA, TB, catechol, cholesterol, steroid, aromatic hydrocarbons catabolism; HET: TAR; 2.00A {Mycobacterium tuberculosis} PDB: 2zi8_A* Length = 300

 Score = 40.3 bits (94), Expect = 4e-04
 Identities = 17/137 (12%), Positives = 38/137 (27%), Gaps = 22/137 (16%)

Query: 21  KRRFLHAVYRVGDLDRTIKFYTECFGMKL--------LRKRDVPEEKYSNAFLGFGPEQS 72
           ++   H V    D    + FY +  G +L               +   +         + 
Sbjct: 140 EQGMGHVVLSTRDDAEALHFYRDVLGFRLRDSMRLPPQMVGRPADGPPAWLRFFGCNPRH 199

Query: 73  HFVVELTYNYGVTSYDIGTGFGHFAIAT---EDVYKLVENIRAKGGNVTREPGPLKGGTT 129
           H +               +G  H  +     +DV   ++    +   ++   G  +    
Sbjct: 200 HSL-------AFLPMPTSSGIVHLMVEVEQADDVGLCLDRALRRKVPMSATLG--RHVND 250

Query: 130 HIAF--VKDPDGYIFEL 144
            +    +K P G+  E 
Sbjct: 251 LMLSFYMKTPGGFDIEF 267

>3fcd_A Lyase, ORF125EGC139; lactoylglutathione lyase, YECM, PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.92A {Uncultured bacterium} Length = 134

 Score = 51.0 bits (122), Expect = 2e-08
 Identities = 15/126 (11%), Positives = 31/126 (24%), Gaps = 15/126 (11%)

Query: 25  LHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGV 84
           +     + D+   +  + +  G +L  +        + A+L         + E       
Sbjct: 9   ITPFLHIPDMQEALTLFCDTLGFELKYRHS------NYAYLELSGCGLRLLEEPARKIIP 62

Query: 85  TSYDIGTGFGHFAIATEDVYKLVENIRAK----GGNVTREPGPLKGGTTHIAFVKDPDGY 140
                G       I   D+  L   +         +       +  G      V+ PDG 
Sbjct: 63  D----GIARVAICIDVSDIDSLHTKLSPALENLPADQVEPLKNMPYGQREF-QVRMPDGD 117

Query: 141 IFELIQ 146
                 
Sbjct: 118 WLNFTA 123

>3fcd_A Lyase, ORF125EGC139; lactoylglutathione lyase, YECM, PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.92A {Uncultured bacterium} Length = 134

 Score = 40.2 bits (94), Expect = 1e-04
 Identities = 20/118 (16%), Positives = 34/118 (28%), Gaps = 15/118 (12%)

Query: 158 MLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAE-EDQTTVLELTYNYGVTE 216
            L + D+  ++  +   LG +L                 YA  E     L L        
Sbjct: 12  FLHIPDMQEALTLFCDTLGFELKYRHS-----------NYAYLELSGCGLRLLEEPARKI 60

Query: 217 YTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIP-GLNTKITSFVDPDG 273
              G A   + I   D+      ++   + L         ++P G   +      PDG
Sbjct: 61  IPDGIARVAICIDVSDIDSLHTKLSPALENLPADQVEPLKNMPYG--QREFQVRMPDG 116

>1ecs_A Bleomycin resistance protein; arm-exchange, antibiotic inhibitor; HET: PG4; 1.70A {Klebsiella pneumoniae} SCOP: d.32.1.2 PDB: 1ewj_A* 1niq_B* 1mh6_A Length = 126

 Score = 50.7 bits (121), Expect = 3e-08
 Identities = 22/130 (16%), Positives = 36/130 (27%), Gaps = 20/130 (15%)

Query: 26  HAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVT 85
                  D D T  FY    G  ++ +            L  G     F       +   
Sbjct: 6   TPNLPSRDFDSTAAFYER-LGFGIVFRDA------GWMILQRGDLMLEF-------FAHP 51

Query: 86  SYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTT------HIAFVKDPDG 139
             D    +    +  +D+ +     ++ G   T    P             +A + DPDG
Sbjct: 52  GLDPLASWFSCCLRLDDLAEFYRQCKSVGIQETSSGYPRIHAPELQGWGGTMAALVDPDG 111

Query: 140 YIFELIQRGP 149
            +  LIQ   
Sbjct: 112 TLLRLIQNEL 121

>3rhe_A NAD-dependent benzaldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, SGX; 2.05A {Legionella pneumophila} Length = 148

 Score = 50.9 bits (121), Expect = 3e-08
 Identities = 19/133 (14%), Positives = 39/133 (29%), Gaps = 15/133 (11%)

Query: 26  HAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVT 85
             ++ V +  ++ +FY      + +      E   + A            + L     + 
Sbjct: 9   LVLFYVKNPAKSEEFYKNLLDTQPI------ESSPTFAMFVMKTG---LRLGLWAQEEIE 59

Query: 86  -SYDIGTGFGHFAIAT---EDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYI 141
                  G    +      E V ++      K  ++ + P  +  G T      DPD + 
Sbjct: 60  PKAHQTGGGMELSFQVNSNEMVDEIHRQWSDKEISIIQPPTQMDFGYT--FVGVDPDEHR 117

Query: 142 FELIQRGPTPEPL 154
             +     T E L
Sbjct: 118 LRIFCLKRTAENL 130

>2kjz_A ATC0852; protein of unknown function, dimer, structural genomics, PSI protein structure initiative; NMR {Agrobacterium tumefaciens} Length = 144

 Score = 50.8 bits (121), Expect = 3e-08
 Identities = 19/129 (14%), Positives = 38/129 (29%), Gaps = 15/129 (11%)

Query: 23  RFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNY 82
                +  V +   + +FY    G+         E   + +            + L   +
Sbjct: 25  HPDFTILYVDNPPASTQFYKALLGVD------PVESSPTFSLFVLANG---MKLGLWSRH 75

Query: 83  GVT-SYDIGTGFGHFAIA---TEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPD 138
            V     +  G G  A        V +     +A G  + ++P  ++ G T      DPD
Sbjct: 76  TVEPKASVTGGGGELAFRVENDAQVDETFAGWKASGVAMLQQPAKMEFGYT--FTAADPD 133

Query: 139 GYIFELIQR 147
            +   +   
Sbjct: 134 SHRLRVYAF 142

>2kjz_A ATC0852; protein of unknown function, dimer, structural genomics, PSI protein structure initiative; NMR {Agrobacterium tumefaciens} Length = 144

 Score = 40.0 bits (93), Expect = 2e-04
 Identities = 23/131 (17%), Positives = 41/131 (31%), Gaps = 14/131 (10%)

Query: 144 LIQRGPTPEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQT 203
           L  +G    P    +L V +   S +FY+  LG+        P +               
Sbjct: 17  LYFQGHMTHPD-FTILYVDNPPASTQFYKALLGVD--PVESSPTF-------SLFVLANG 66

Query: 204 TVLELTYNYGVTEYTKGNA-YAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLN 262
             L L   + V           ++A   ++  +  E      +  G  + +QP  +    
Sbjct: 67  MKLGLWSRHTVEPKASVTGGGGELAFRVENDAQVDETFAGW-KASGVAMLQQPAKMEFGY 125

Query: 263 TKITSFVDPDG 273
           T   +  DPD 
Sbjct: 126 T--FTAADPDS 134

>3isq_A 4-hydroxyphenylpyruvate dioxygenase; tyrosine metabolism, DIS mutation, iron, mental retardation, metal-binding, oxidored phenylalanine catabolism; 1.75A {Homo sapiens} PDB: 1sqi_A* Length = 393

 Score = 52.2 bits (124), Expect = 6e-08
 Identities = 46/271 (16%), Positives = 86/271 (31%), Gaps = 49/271 (18%)

Query: 17  PKKDKRRFL---HAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSH 73
            K ++ RFL      + VG+  +   FY    G + L  R +               +  
Sbjct: 2   AKPERGRFLHFHSVTFWVGNAKQAASFYCSKMGFEPLAYRGLETGSREVVSHVIKQGKIV 61

Query: 74  FVVELTYN-----YGVTSYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLK--G 126
           FV+    N      G      G G    A   ED   +V+  R +G  + REP   +   
Sbjct: 62  FVLSSALNPWNKEMGDHLVKHGDGVKDIAFEVEDCDYIVQKARERGAKIMREPWVEQDKF 121

Query: 127 GTTHIAFVKDPDGYIFELIQRG-----------------PTPEPLCQVMLRV-------- 161
           G    A ++        L+++                  P    L +  L +        
Sbjct: 122 GKVKFAVLQTYGDTTHTLVEKMNYIGQFLPGYEAPAFMDPLLPKLPKCSLEMIDHIVGNQ 181

Query: 162 --GDLGRSIKFYEKALGMKLLRTVDKPEY--KYTL----AMLGYAEEDQTTVLELTYNYG 213
              ++  + ++Y K L      +VD  +   +Y+      +  Y E  +  + E      
Sbjct: 182 PDQEMVSASEWYLKNLQFHRFWSVDDTQVHTEYSSLRSIVVANYEESIKMPINEPAPGKK 241

Query: 214 VT------EYTKGNAYAQVAISTDDVYKSAE 238
            +      +Y  G     +A+ T+D+  +  
Sbjct: 242 KSQIQEYVDYNGGAGVQHIALKTEDIITAIR 272

>1kw3_B 2,3-dihydroxybiphenyl dioxygenase; four TIME repetitions of the beta-alpha-beta-BETA-beta motif oxidoreductase; 1.45A {Pseudomonas SP} SCOP: d.32.1.3 d.32.1.3 PDB: 1dhy_A 1eiq_A 1eir_A* 1eil_A 1kw6_B* 1kw8_B* 1kw9_B* 1kwb_B 1kwc_B* Length = 292

 Score = 51.5 bits (123), Expect = 7e-08
 Identities = 24/174 (13%), Positives = 50/174 (28%), Gaps = 32/174 (18%)

Query: 26  HAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVT 85
           +  + V D+     F T+  G+               A      +++  +       G  
Sbjct: 7   YLGFAVKDVPAWDHFLTKSVGLMAAGSAG------DAALYR-ADQRAWRIA---VQPGEL 56

Query: 86  SYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPL--KGGTTHIAFVKDPDGYIFE 143
                 G          + ++ + +R  G   TR    L  +     +  ++DP G   E
Sbjct: 57  DDLAYAGLE--VDDAAALERMADKLRQAGVAFTRGDEALMQQRKVMGLLCLQDPFGLPLE 114

Query: 144 LI------------------QRGPTPEPLCQVMLRVGDLGRSIKFYEKALGMKL 179
           +                         + +   +  V D  +++ FY + LG  L
Sbjct: 115 IYYGPAEIFHEPFLPSAPVSGFVTGDQGIGHFVRCVPDTAKAMAFYTEVLGFVL 168

>2wl9_A Catechol 2,3-dioxygenase; aromatic hydrocarbons catabolism, iron, oxidoreductase; 1.90A {Rhodococcus SP} PDB: 2wl3_A Length = 305

 Score = 51.1 bits (122), Expect = 1e-07
 Identities = 32/276 (11%), Positives = 72/276 (26%), Gaps = 51/276 (18%)

Query: 26  HAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVT 85
           +    V +LD    +     GM++     V + +    +L         V+         
Sbjct: 9   YLGLSVSNLDAWRDYAAGIMGMQV-----VDDGEDDRIYLRMDRWHHRIVLH-------- 55

Query: 86  SYDIGTGFGHFAIAT---EDVYKLVENIRAKGGNVTREPGPLKG--GTTHIAFVKDPDGY 140
             D      +         ++ +L E ++  G                  +  + DP G 
Sbjct: 56  -ADGSDDLAYIGWRVAGPVELDELAEQLKNAGIPFEVASDADAAERRVLGLVKLHDPGGN 114

Query: 141 IFELI-------------------QRGPTPEPLCQVMLRVGDLGRSIKFYEKALGMKL-- 179
             E+                    +     + L  +++R  D+  + +FY          
Sbjct: 115 PTEIFYGPQVDTSSPFHPGRPMFGKFVTEGQGLGHIIIREDDVEEATRFYRLLGLEGAVE 174

Query: 180 LRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDVYKSAEV 239
            +         T   +   +   +    +          + N         DD+  + ++
Sbjct: 175 YKFALPNGAVGTPVFMHCNDRHHSLAFGVG-----PMDKRINHLMIEYTHLDDLGYAHDL 229

Query: 240 VNLVTQELGGKITRQPGS-IPGLNTKITSFVDPDGW 274
           V    ++    +T Q G              +P GW
Sbjct: 230 V----RQQKIDVTLQIGKHSNDEALTFY-CANPSGW 260

>2wl9_A Catechol 2,3-dioxygenase; aromatic hydrocarbons catabolism, iron, oxidoreductase; 1.90A {Rhodococcus SP} PDB: 2wl3_A Length = 305

 Score = 39.2 bits (91), Expect = 9e-04
 Identities = 17/129 (13%), Positives = 38/129 (29%), Gaps = 13/129 (10%)

Query: 21  KRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTY 80
            +   H + R  D++   +FY        +  +           +       H      +
Sbjct: 144 GQGLGHIIIREDDVEEATRFYRLLGLEGAVEYKFALPNGAVGTPVFMHCNDRH------H 197

Query: 81  NYGVTSYDIGTGFGHFAIATE---DVYKLVENIRAKGGNVTREPGPLKGGTTHIAF--VK 135
           +       +     H  I      D+    + +R +  +VT + G  K            
Sbjct: 198 SLAFGVGPMDKRINHLMIEYTHLDDLGYAHDLVRQQKIDVTLQIG--KHSNDEALTFYCA 255

Query: 136 DPDGYIFEL 144
           +P G+++E 
Sbjct: 256 NPSGWLWEP 264

>3bt3_A Glyoxalase-related enzyme, ARAC type; VOC superfamily, PSI-2, NYSGXRC, structural genomics, prote structure initiative; 2.50A {Clostridium phytofermentans} Length = 148

 Score = 49.3 bits (117), Expect = 1e-07
 Identities = 22/124 (17%), Positives = 39/124 (31%), Gaps = 4/124 (3%)

Query: 28  VYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSY 87
           VY   D+D+T+K++ E  G          E       +   P +        +       
Sbjct: 26  VYFTKDMDKTVKWFEEILGWSGDIVARDDEGFGDYGCVFDYPSEVAVAHLTPFRGFHLFK 85

Query: 88  DIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYI---FEL 144
                     +  E +  L + ++  G +   +      G    + +   DG I   FE 
Sbjct: 86  GEPIKGVAGFMMIEGIDALHKYVKENGWDQISDIYTQPWGARECS-ITTTDGCILRFFES 144

Query: 145 IQRG 148
           IQ G
Sbjct: 145 IQEG 148

>2ehz_A 1,2-dihydroxynaphthalene dioxygenase; extradiol dioxygenase, protein substrate complex, oxidoreduc; 1.35A {Pseudomonas SP} PDB: 2ei0_A* 2ei1_A* 2ei3_A* 2ei2_A Length = 302

 Score = 48.8 bits (116), Expect = 6e-07
 Identities = 25/175 (14%), Positives = 50/175 (28%), Gaps = 33/175 (18%)

Query: 26  HAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVT 85
           +    V D D    F T+  G+++     + E +    +L         VV     +   
Sbjct: 12  YMGISVKDPDAWKSFATDMLGLQV-----LDEGEKDRFYLRMDYWHHRIVVH----HNGQ 62

Query: 86  SYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPL--KGGTTHIAFVKDPDGYIFE 143
                 G+        +   L + +   G  +         +     +   +DP G   E
Sbjct: 63  DDLEYLGWR--VAGKPEFEALGQKLIDAGYKIRICDKVEAQERMVLGLMKTEDPGGNPTE 120

Query: 144 LI-------------------QRGPTPEPLCQVMLRVGDLGRSIKFYEKALGMKL 179
           +                    +     + L   ++R  D+  + KFY   LG + 
Sbjct: 121 IFWGPRIDMSNPFHPGRPLHGKFVTGDQGLGHCIVRQTDVAEAHKFYSL-LGFRG 174

>3sk2_A EHPR; antibiotic resistance, griseoluteate-binding protein; HET: GRI; 1.01A {Pantoea agglomerans} PDB: 3sk1_A* Length = 132

 Score = 46.5 bits (110), Expect = 9e-07
 Identities = 21/122 (17%), Positives = 37/122 (30%), Gaps = 12/122 (9%)

Query: 26  HAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVT 85
             +  V +++R+  FY   F  +       P               + F +       V 
Sbjct: 16  LQLVYVSNVERSTDFYRFIFKKE-------PVFVTPRYVAFPSSGDALFAIWSGGEEPVA 68

Query: 86  SYDIGTGFGHFAIATEDV---YKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIF 142
                +  G      EDV   +      ++    V +EP     G      + DPDG+I 
Sbjct: 69  EIPRFSEIGIMLPTGEDVDKLFNEWTKQKSHQIIVIKEPYTDVFG--RTFLISDPDGHII 126

Query: 143 EL 144
            +
Sbjct: 127 RV 128

>1xy7_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G48480, reductively methylated protein, CATH 3.10.180 fold; 1.80A {Arabidopsis thaliana} SCOP: d.32.1.9 PDB: 2q48_A Length = 166

 Score = 45.8 bits (108), Expect = 2e-06
 Identities = 21/136 (15%), Positives = 34/136 (25%), Gaps = 11/136 (8%)

Query: 26  HAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSN-------AFLGFGPEQSHFVVEL 78
             +     +   + FY   FG         P+ K          + L             
Sbjct: 29  MLLVEAQKVGDAVTFYKSAFGAIESGHSLYPKRKLDQELPHVLSSELNLAGSSFVVCDVS 88

Query: 79  TYNYGVTSYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPD 138
           +     T+   G+G   F + T+D    V      G                   V DP 
Sbjct: 89  SLPGFSTAKSEGSGV-TFLLGTKDAEAAVAKAVDAGAVKVEVTEAEVEL-GFKGKVTDPF 146

Query: 139 GYIFELIQRG--PTPE 152
           G  +   ++    T E
Sbjct: 147 GVTWIFAEKKTVITDE 162

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 47.2 bits (111), Expect = 4e-06
 Identities = 48/335 (14%), Positives = 96/335 (28%), Gaps = 83/335 (24%)

Query: 3   EASPAAANAELLEWPKKDKRRFLHAVYRVGDLDRTI--KFYTECF-----GMKLLRKRDV 55
            +       + +E   +   +FL +  +      ++  + Y E         ++  K +V
Sbjct: 72  LSKQEEMVQKFVEEVLRINYKFLMSPIKTEQRQPSMMTRMYIEQRDRLYNDNQVFAKYNV 131

Query: 56  P-EEKYS---NAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIATEDVYKLVENIR 111
              + Y     A L   P ++  +       GV       G G   +A + V    +   
Sbjct: 132 SRLQPYLKLRQALLELRPAKNVLI------DGVL------GSGKTWVALD-VCLSYKVQC 178

Query: 112 AKGGNVTREPGPLKGGTTH---IAFVKDPDGYIFELIQRGPTPEPLCQVM----LRVGDL 164
                +                +     P+  + E++Q+      L   +        D 
Sbjct: 179 KMDFKI------------FWLNLKNCNSPET-VLEMLQK------LLYQIDPNWTSRSDH 219

Query: 165 GRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEED-------------QTTVLELTYN 211
             +IK    ++  +L R +    Y+  L +L                      +L  T  
Sbjct: 220 SSNIKLRIHSIQAELRRLLKSKPYENCLLVL-----LNVQNAKAWNAFNLSCKILLTTRF 274

Query: 212 YGVTEYTKGNAYAQVAIS-TDDVYKSAEVVNLVTQELGGKITRQPGSIPGLN-------- 262
             VT++        +++          EV +L+ + L  +    P  +   N        
Sbjct: 275 KQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPREVLTTNPRRLSIIA 334

Query: 263 TKITSFVD-PDGWKTVLVDN-----EDFLKELQSE 291
             I   +   D WK V  D      E  L  L+  
Sbjct: 335 ESIRDGLATWDNWKHVNCDKLTTIIESSLNVLEPA 369

>1xrk_A Bleomycin resistance protein; arm exchange, ligand binding protein, thermostable mutant, antibiotic inhibitor; HET: BLM; 1.50A {Streptoalloteichus hindustanus} SCOP: d.32.1.2 PDB: 2zhp_A* 1byl_A Length = 124

 Score = 43.4 bits (102), Expect = 7e-06
 Identities = 17/125 (13%), Positives = 31/125 (24%), Gaps = 8/125 (6%)

Query: 25  LHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGV 84
              V    D+   ++F+T+  G          E+ +  A +                   
Sbjct: 7   AVPVLTARDVAEAVEFWTDRLGFSR----VFVEDDF--AGVVRDDVTLFISAVQDQVVPD 60

Query: 85  TSYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFEL 144
            +       G   +  E    +  N R   G    E      G      ++DP G     
Sbjct: 61  NTQAWVWVRGLDELYAEWSEVVSTNFRDASGPAMTEIVEQPWGRE--FALRDPAGNCVHF 118

Query: 145 IQRGP 149
           +    
Sbjct: 119 VAEEQ 123

>1t47_A 4-hydroxyphenylpyruvate dioxygenase; triketone inhibitor, iron, oxidoreductase; HET: NTD; 2.50A {Streptomyces avermitilis} SCOP: d.32.1.3 d.32.1.3 Length = 381

 Score = 41.4 bits (96), Expect = 2e-04
 Identities = 39/263 (14%), Positives = 74/263 (28%), Gaps = 46/263 (17%)

Query: 22  RRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYN 81
           +     V+ VG+  +   +Y+  FGM+L+            A        + FV+     
Sbjct: 21  KGMDAVVFAVGNAKQAAHYYSTAFGMQLVAYSGPENGSRETASYVLTNGSARFVLTSVIK 80

Query: 82  YGVTSYDI--------GTGFGHFAIATEDVYKLVENIRAKGGNVTREP--GPLKGGTTHI 131
                           G G    AI   D           G     EP     + GT  +
Sbjct: 81  PATPWGHFLADHVAEHGDGVVDLAIEVPDARAAHAYAIEHGARSVAEPYELKDEHGTVVL 140

Query: 132 AFVKDPDGYIFELIQRG--------------PTPEPLCQVMLRV----------GDLGRS 167
           A +         L+ R               P  EP      +           G +   
Sbjct: 141 AAIATYGKTRHTLVDRTGYDGPYLPGYVAAAPIVEPPAHRTFQAIDHCVGNVELGRMNEW 200

Query: 168 IKFYEKALGMKLLRTVDKPEY--KYTL----AMLGYAEEDQTTVLELTYNYGVT------ 215
           + FY K +G   ++     +   +Y+      +     + +  + E       +      
Sbjct: 201 VGFYNKVMGFTNMKEFVGDDIATEYSALMSKVVADGTLKVKFPINEPALAKKKSQIDEYL 260

Query: 216 EYTKGNAYAQVAISTDDVYKSAE 238
           E+  G     +A++T D+ ++  
Sbjct: 261 EFYGGAGVQHIALNTGDIVETVR 283

>1sqd_A 4-hydroxyphenylpyruvate dioxygenase; oxidoreductase; 1.80A {Arabidopsis thaliana} SCOP: d.32.1.3 d.32.1.3 PDB: 1tfz_A* 1tg5_A* 1sp9_A Length = 424

 Score = 41.1 bits (95), Expect = 2e-04
 Identities = 36/277 (12%), Positives = 74/277 (26%), Gaps = 60/277 (21%)

Query: 22  RRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYN 81
           +RF H  +  GD     + ++   GM+   K D+      +A          F+    Y+
Sbjct: 24  KRFHHIEFWCGDATNVARRFSWGLGMRFSAKSDLSTGNMVHASYLLTSGDLRFLFTAPYS 83

Query: 82  YGVTSYDI-----------------------GTGFGHFAIATEDVYKLVENIRAKGGNVT 118
             +++ +I                       G G    AI  ED         A G   +
Sbjct: 84  PSLSAGEIKPTTTASIPSFDHGSCRSFFSSHGLGVRAVAIEVEDAESAFSISVANGAIPS 143

Query: 119 REPGPLKG----------GTTHIAFVKDPDGYIFELI--------------QRGPTPEPL 154
             P  L            G   + +V        +                        L
Sbjct: 144 SPPIVLNEAVTIAEVKLYGDVVLRYVSYKAEDTEKSEFLPGFERVEDASSFPLDYGIRRL 203

Query: 155 CQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYK------YTLAMLGYAEEDQTTVLEL 208
              +  V +LG ++ +     G          +         +  +    E     + E 
Sbjct: 204 DHAVGNVPELGPALTYVAGFTGFHQFAEFTADDVGTAESGLNSAVLASNDEMVLLPINEP 263

Query: 209 TYNYGVT-------EYTKGNAYAQVAISTDDVYKSAE 238
            +            E+ +G     +A+ ++D++++  
Sbjct: 264 VHGTKRKSQIQTYLEHNEGAGLQHLALMSEDIFRTLR 300

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	291
3zi1_A	330	Glyoxalase domain-containing protein 4; isomerase;	100.0
1f1u_A	323	Homoprotocatechuate 2,3-dioxygenase; extradiol, ma	100.0
3lm4_A	339	Catechol 2,3-dioxygenase; NYSGXRC, PSI-II, protein	100.0
3oaj_A	335	Putative ring-cleaving dioxygenase MHQO; structura	100.0
3hpy_A	309	Catechol 2,3-dioxygenase; repeated motifs, aromati	100.0
1zsw_A	338	Metallo protein, glyoxalase family protein; hypoth	100.0
1mpy_A	307	Catechol 2,3-dioxygenase; extradiol dioxygenase, n	100.0
4ghg_A	365	Homoprotocatechuate 2,3-dioxygenase; oxygen activa	100.0
3oxh_A	282	RV0577 protein; kinase regulation, antibiotic resi	100.0
3b59_A	310	Glyoxalase/bleomycin resistance protein/dioxygena;	100.0
2zyq_A	300	Probable biphenyl-2,3-DIOL 1,2-dioxygenase BPHC; e	100.0
1kw3_B	292	2,3-dihydroxybiphenyl dioxygenase; four TIME repet	100.0
2wl9_A	305	Catechol 2,3-dioxygenase; aromatic hydrocarbons ca	100.0
1lgt_A	297	Biphenyl-2,3-DIOL 1,2-dioxygenase; extradiol dioxy	100.0
2ehz_A	302	1,2-dihydroxynaphthalene dioxygenase; extradiol di	100.0
2r5v_A	357	PCZA361.1; dioxygenase, non-heme iron, vancomycin,	99.97
1t47_A	381	4-hydroxyphenylpyruvate dioxygenase; triketone inh	99.97
3isq_A	393	4-hydroxyphenylpyruvate dioxygenase; tyrosine meta	99.95
1sqd_A	424	4-hydroxyphenylpyruvate dioxygenase; oxidoreductas	99.95
1sp8_A	418	4-hydroxyphenylpyruvate dioxygenase; oxidoreductas	99.94
1cjx_A	357	4-hydroxyphenylpyruvate dioxygenase; oxidoreductas	99.93
1f9z_A	135	Glyoxalase I; beta-alpha-beta-BETA-beta motif, pro	99.87
1f9z_A	135	Glyoxalase I; beta-alpha-beta-BETA-beta motif, pro	99.86
4g6x_A	155	Glyoxalase/bleomycin resistance protein/dioxygena;	99.86
4g6x_A	155	Glyoxalase/bleomycin resistance protein/dioxygena;	99.86
3l7t_A	134	SMU.1112C, putative uncharacterized protein; metal	99.85
4hc5_A	133	Glyoxalase/bleomycin resistance protein/dioxygena;	99.84
2c21_A	144	Trypanothione-dependent glyoxalase I; lyase, gluta	99.83
3rmu_A	134	Methylmalonyl-COA epimerase, mitochondrial; struct	99.83
3pkv_A	252	Toxoflavin lyase (TFLA); metalloenzyme, vicinal ox	99.83
3e5d_A	127	Putative glyoxalase I; structural genomics, joint	99.83
2p25_A	126	Glyoxalase family protein; structural genomics, MC	99.82
3hdp_A	133	Glyoxalase-I; glutathione,lyase, methylglyoxal,110	99.82
3vw9_A	187	Lactoylglutathione lyase; glyoxalase, lyase-lyase	99.82
3e5d_A	127	Putative glyoxalase I; structural genomics, joint	99.81
1ss4_A	153	Glyoxalase family protein; structural genomics, PS	99.81
4hc5_A	133	Glyoxalase/bleomycin resistance protein/dioxygena;	99.81
2c21_A	144	Trypanothione-dependent glyoxalase I; lyase, gluta	99.8
3rmu_A	134	Methylmalonyl-COA epimerase, mitochondrial; struct	99.8
3oa4_A	161	Glyoxalase, BH1468 protein; structural genomics, p	99.8
3l7t_A	134	SMU.1112C, putative uncharacterized protein; metal	99.8
3vw9_A	187	Lactoylglutathione lyase; glyoxalase, lyase-lyase	99.8
3hdp_A	133	Glyoxalase-I; glutathione,lyase, methylglyoxal,110	99.8
3gm5_A	159	Lactoylglutathione lyase and related lyases; sheet	99.8
1jc4_A	148	Methylmalonyl-COA epimerase; vicinal oxygen chelat	99.8
3kol_A	156	Oxidoreductase, glyoxalase/bleomycin resistance pr	99.8
3huh_A	152	Virulence protein STM3117; structural genomics, ny	99.8
3uh9_A	145	Metallothiol transferase FOSB 2; structural genomi	99.79
2rk0_A	136	Glyoxalase/bleomycin resistance protein/dioxygena;	99.79
3ey7_A	133	Biphenyl-2,3-DIOL 1,2-dioxygenase III-related prot	99.79
3ghj_A	141	Putative integron gene cassette protein; integron	99.78
3oa4_A	161	Glyoxalase, BH1468 protein; structural genomics, p	99.78
2za0_A	184	Glyoxalase I; lyase, lactoylglutathione lyase, met	99.77
2p25_A	126	Glyoxalase family protein; structural genomics, MC	99.77
3gm5_A	159	Lactoylglutathione lyase and related lyases; sheet	99.77
3uh9_A	145	Metallothiol transferase FOSB 2; structural genomi	99.77
2za0_A	184	Glyoxalase I; lyase, lactoylglutathione lyase, met	99.76
2rk0_A	136	Glyoxalase/bleomycin resistance protein/dioxygena;	99.76
1ss4_A	153	Glyoxalase family protein; structural genomics, PS	99.76
1jc4_A	148	Methylmalonyl-COA epimerase; vicinal oxygen chelat	99.76
3sk2_A	132	EHPR; antibiotic resistance, griseoluteate-binding	99.76
2i7r_A	118	Conserved domain protein; structural genomics cons	99.76
3rhe_A	148	NAD-dependent benzaldehyde dehydrogenase; structur	99.76
3rhe_A	148	NAD-dependent benzaldehyde dehydrogenase; structur	99.75
1r9c_A	139	Glutathione transferase; fosfomycin resistance pro	99.75
2p7o_A	133	Glyoxalase family protein; fosfomycin resistance p	99.75
3kol_A	156	Oxidoreductase, glyoxalase/bleomycin resistance pr	99.75
3itw_A	137	Protein TIOX; bleomycin resistance fold, bisinterc	99.74
2qqz_A	126	Glyoxalase family protein, putative; alpha-beta st	99.74
3sk2_A	132	EHPR; antibiotic resistance, griseoluteate-binding	99.74
3g12_A	128	Putative lactoylglutathione lyase; glyoxalase, ble	99.74
3rri_A	135	Glyoxalase/bleomycin resistance protein/dioxygena;	99.74
3zw5_A	147	Glyoxalase domain-containing protein 5; lyase; 1.6	99.74
2i7r_A	118	Conserved domain protein; structural genomics cons	99.74
2pjs_A	119	AGR_C_3564P, uncharacterized protein ATU1953; glyo	99.74
3g12_A	128	Putative lactoylglutathione lyase; glyoxalase, ble	99.73
3ey7_A	133	Biphenyl-2,3-DIOL 1,2-dioxygenase III-related prot	99.73
3r6a_A	144	Uncharacterized protein; PSI biology, structural g	99.73
3m2o_A	164	Glyoxalase/bleomycin resistance protein; unknown f	99.73
2kjz_A	144	ATC0852; protein of unknown function, dimer, struc	99.73
3r6a_A	144	Uncharacterized protein; PSI biology, structural g	99.73
3ghj_A	141	Putative integron gene cassette protein; integron	99.73
3huh_A	152	Virulence protein STM3117; structural genomics, ny	99.73
1twu_A	139	Hypothetical protein YYCE; structural genomics, pr	99.73
1nki_A	135	Probable fosfomycin resistance protein; potassium	99.73
3bqx_A	150	Glyoxalase-related enzyme; VOC superfamily, PSI-2,	99.72
1twu_A	139	Hypothetical protein YYCE; structural genomics, pr	99.72
1r9c_A	139	Glutathione transferase; fosfomycin resistance pro	99.72
2r6u_A	148	Uncharacterized protein; structural genomics, PSI-	99.72
3itw_A	137	Protein TIOX; bleomycin resistance fold, bisinterc	99.72
1npb_A	141	Fosfomycin-resistance protein; manganese binding,	99.72
2a4x_A	138	Mitomycin-binding protein; ALFA/beta protein, mito	99.72
2p7o_A	133	Glyoxalase family protein; fosfomycin resistance p	99.72
2qqz_A	126	Glyoxalase family protein, putative; alpha-beta st	99.71
1xrk_A	124	Bleomycin resistance protein; arm exchange, ligand	99.71
2kjz_A	144	ATC0852; protein of unknown function, dimer, struc	99.71
3fcd_A	134	Lyase, ORF125EGC139; lactoylglutathione lyase, YEC	99.71
2pjs_A	119	AGR_C_3564P, uncharacterized protein ATU1953; glyo	99.7
3bqx_A	150	Glyoxalase-related enzyme; VOC superfamily, PSI-2,	99.7
2a4x_A	138	Mitomycin-binding protein; ALFA/beta protein, mito	99.7
1xrk_A	124	Bleomycin resistance protein; arm exchange, ligand	99.7
1ecs_A	126	Bleomycin resistance protein; arm-exchange, antibi	99.7
3r4q_A	160	Lactoylglutathione lyase; structural genomics, PSI	99.69
3ct8_A	146	Protein BH2160, putative glyoxalase; NP_243026.1,	99.69
3r4q_A	160	Lactoylglutathione lyase; structural genomics, PSI	99.68
3ct8_A	146	Protein BH2160, putative glyoxalase; NP_243026.1,	99.68
2r6u_A	148	Uncharacterized protein; structural genomics, PSI-	99.68
3m2o_A	164	Glyoxalase/bleomycin resistance protein; unknown f	99.68
2rbb_A	141	Glyoxalase/bleomycin resistance protein/dioxygena;	99.68
1xqa_A	113	Glyoxalase/bleomycin resistance protein; dioxygena	99.68
3zi1_A	330	Glyoxalase domain-containing protein 4; isomerase;	99.68
3rri_A	135	Glyoxalase/bleomycin resistance protein/dioxygena;	99.68
1nki_A	135	Probable fosfomycin resistance protein; potassium	99.68
2rbb_A	141	Glyoxalase/bleomycin resistance protein/dioxygena;	99.68
1xqa_A	113	Glyoxalase/bleomycin resistance protein; dioxygena	99.68
1qto_A	122	Bleomycin-binding protein; arm-exchange, antibioti	99.67
1npb_A	141	Fosfomycin-resistance protein; manganese binding,	99.67
4gym_A	149	Glyoxalase/bleomycin resistance protein/dioxygena;	99.67
1ecs_A	126	Bleomycin resistance protein; arm-exchange, antibi	99.67
3fcd_A	134	Lyase, ORF125EGC139; lactoylglutathione lyase, YEC	99.67
3e0r_A	244	C3-degrading proteinase (CPPA protein); MCSG, PSI,	99.66
3zw5_A	147	Glyoxalase domain-containing protein 5; lyase; 1.6	99.66
2qnt_A	141	AGR_C_3434P, uncharacterized protein ATU1872; glyo	99.66
1qto_A	122	Bleomycin-binding protein; arm-exchange, antibioti	99.65
3lm4_A	339	Catechol 2,3-dioxygenase; NYSGXRC, PSI-II, protein	99.65
4gym_A	149	Glyoxalase/bleomycin resistance protein/dioxygena;	99.65
3hpy_A	309	Catechol 2,3-dioxygenase; repeated motifs, aromati	99.65
2qnt_A	141	AGR_C_3434P, uncharacterized protein ATU1872; glyo	99.64
1mpy_A	307	Catechol 2,3-dioxygenase; extradiol dioxygenase, n	99.63
2rk9_A	145	Glyoxalase/bleomycin resistance protein/dioxygena;	99.63
3bt3_A	148	Glyoxalase-related enzyme, ARAC type; VOC superfam	99.63
1f1u_A	323	Homoprotocatechuate 2,3-dioxygenase; extradiol, ma	99.62
2rk9_A	145	Glyoxalase/bleomycin resistance protein/dioxygena;	99.61
2zyq_A	300	Probable biphenyl-2,3-DIOL 1,2-dioxygenase BPHC; e	99.6
3oaj_A	335	Putative ring-cleaving dioxygenase MHQO; structura	99.6
3bt3_A	148	Glyoxalase-related enzyme, ARAC type; VOC superfam	99.6
3oxh_A	282	RV0577 protein; kinase regulation, antibiotic resi	99.59
1kw3_B	292	2,3-dihydroxybiphenyl dioxygenase; four TIME repet	99.58
3b59_A	310	Glyoxalase/bleomycin resistance protein/dioxygena;	99.57
2wl9_A	305	Catechol 2,3-dioxygenase; aromatic hydrocarbons ca	99.56
1lgt_A	297	Biphenyl-2,3-DIOL 1,2-dioxygenase; extradiol dioxy	99.56
4ghg_A	365	Homoprotocatechuate 2,3-dioxygenase; oxygen activa	99.55
1xy7_A	166	Unknown protein; structural genomics, protein stru	99.55
2ehz_A	302	1,2-dihydroxynaphthalene dioxygenase; extradiol di	99.54
1zsw_A	338	Metallo protein, glyoxalase family protein; hypoth	99.54
1u6l_A	149	Hypothetical protein; structural genomics, PSI, pr	99.51
2zw5_A	301	Bleomycin acetyltransferase; dimer, two domains; H	99.49
3pkv_A	252	Toxoflavin lyase (TFLA); metalloenzyme, vicinal ox	99.48
1xy7_A	166	Unknown protein; structural genomics, protein stru	99.48
1u6l_A	149	Hypothetical protein; structural genomics, PSI, pr	99.48
1u7i_A	136	Hypothetical protein; structural genomics, PA1358,	99.46
1u7i_A	136	Hypothetical protein; structural genomics, PA1358,	99.45
2zw5_A	301	Bleomycin acetyltransferase; dimer, two domains; H	99.42
2r5v_A	357	PCZA361.1; dioxygenase, non-heme iron, vancomycin,	99.37
1t47_A	381	4-hydroxyphenylpyruvate dioxygenase; triketone inh	99.35
1tsj_A	139	Conserved hypothetical protein; structural genomic	99.33
1sqd_A	424	4-hydroxyphenylpyruvate dioxygenase; oxidoreductas	99.3
3isq_A	393	4-hydroxyphenylpyruvate dioxygenase; tyrosine meta	99.28
1tsj_A	139	Conserved hypothetical protein; structural genomic	99.26
3l20_A	172	Putative uncharacterized protein; hypothetical pro	99.26
3oms_A	138	PHNB protein; structural genomics, PSI-2, protein	99.23
3l20_A	172	Putative uncharacterized protein; hypothetical pro	99.2
1cjx_A	357	4-hydroxyphenylpyruvate dioxygenase; oxidoreductas	99.2
1sp8_A	418	4-hydroxyphenylpyruvate dioxygenase; oxidoreductas	99.17
3oms_A	138	PHNB protein; structural genomics, PSI-2, protein	99.16
3e0r_A	244	C3-degrading proteinase (CPPA protein); MCSG, PSI,	98.92
3p8a_A	274	Uncharacterized protein; mainly antiparallel beta	98.74
1u69_A	163	Hypothetical protein; structural genomics, MSCG, p	98.23
1u69_A	163	Hypothetical protein; structural genomics, MSCG, p	98.2
3opy_B	941	6-phosphofructo-1-kinase beta-subunit; ATP binding	97.53
3opy_B	941	6-phosphofructo-1-kinase beta-subunit; ATP binding	97.52
3p8a_A	274	Uncharacterized protein; mainly antiparallel beta	95.83
3opy_A	989	6-phosphofructo-1-kinase alpha-subunit; ATP bindin	91.3

>3zi1_A Glyoxalase domain-containing protein 4; isomerase; 1.90A {Homo sapiens}

Probab=100.00  E-value=1.9e-35  Score=253.31  Aligned_cols=247  Identities=33%  Similarity=0.577  Sum_probs=188.6

Q ss_pred             CCCcceeeEEEEEEeCCHHHHHHHHHhhcCCEEEEEeecC-----------CCceeEEEEecCCCCcceEEEeeecCCCC
Q 022818           17 PKKDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVP-----------EEKYSNAFLGFGPEQSHFVVELTYNYGVT   85 (291)
Q Consensus        17 ~~~~~~~i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~l~~~~~~~~~   85 (291)
                      .++++++|.|++|.|+|++++++||+++|||++..+...+           ++.+..+++.+++......+++..+....
T Consensus        21 ~~M~~~~i~Hv~l~V~Dle~s~~FY~~vLGl~~~~~~~~~~~~~a~~~g~~~~~~~~~~l~~~~~~~~~~leL~~~~~~~  100 (330)
T 3zi1_A           21 QSMAARRALHFVFKVGNRFQTARFYRDVLGMKVLRHEEFEEGCKAACNGPYDGKWSKTMVGFGPEDDHFVAELTYNYGVG  100 (330)
T ss_dssp             GGCSCCEEEEEEEECSCHHHHHHHHHHTSCCEEEEEEEEC---------CCCSCEEEEEEESSCTTTCCEEEEEEETTCC
T ss_pred             eecccceeeEEEEEeCCHHHHHHHHHHhcCCeEEEEeecchhhhhhccCCcCCceEEEEEecCCCCCccEEEEeccCCCC
Confidence            3455789999999999999999999999999998876655           34566777777655556677777665555


Q ss_pred             cccCCCCceEEEEEeCCHHHHHHHHHHcCCeeecCCeecCCCceEEEEEECCCCCEEEEEeCCC-CCCCceEEEeeeCCh
Q 022818           86 SYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRGP-TPEPLCQVMLRVGDL  164 (291)
Q Consensus        86 ~~~~g~~~~~i~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~Dp~G~~iel~~~~~-~~~~~~~v~l~v~d~  164 (291)
                      .+..+.++.|++|.|+|+   +++++++|+++...+    . .  .+||+||||+.|||++... .+.++.|+.|.|.|+
T Consensus       101 ~~~~~~g~~hiaf~V~d~---~~~l~~~G~~~~~~~----~-~--~~~~~DPdG~~iel~~~~~~~~~~i~hv~L~v~Dl  170 (330)
T 3zi1_A          101 DYKLGNDFMGITLASSQA---VSNARKLEWPLTEVA----E-G--VFETEAPGGYKFYLQNRSLPQSDPVLKVTLAVSDL  170 (330)
T ss_dssp             CCCBCSSEEEEEEECHHH---HHHHHHHTCCCEEEE----T-T--EEEEECTTSCEEEEESSCCTTSCSEEEEEEEESCH
T ss_pred             ccccCCCeeEEEEECchH---HHHHHHcCCceeccC----C-c--eEEEECCCCCEEEEEecCCCCCCceeEEEEECCCH
Confidence            555677899999999987   678889999876543    1 2  4889999999999999863 456899999999999


Q ss_pred             hhhHHHHHHhcCCeeeeeeccCCccceEEEeccccCCceeEEEEeeecCcceeecCcceeEEEEEec--chHHhHHHHHH
Q 022818          165 GRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTD--DVYKSAEVVNL  242 (291)
Q Consensus       165 ~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~hi~~~v~--di~~~~~~l~~  242 (291)
                      +++.+||+++|||++.......+    ..++..++.  ...+++.....  ....++++.|++|.|+  |+++++++|  
T Consensus       171 ~~a~~FY~~vLG~~~~~~~~~~~----~~~l~~g~~--~~~l~l~~~~~--~~~~~~~~~hiaf~v~~~dld~~~~rl--  240 (330)
T 3zi1_A          171 QKSLNYWCNLLGMKIYENDEEKQ----RALLGYADN--QCKLELQGVKG--GVDHAAAFGRIAFSCPQKELPDLEDLM--  240 (330)
T ss_dssp             HHHHHHHHHTTCCEEEEEETTTT----EEEEESSTT--SCEEEEEECSS--CCCCBTTCCEEEEEECGGGHHHHHHHH--
T ss_pred             HHHHHHHHHhcCCEEEeeccCCc----EEEEEeCCc--eEEEEECCCCC--CCCCCCCCceEEEEEEcccHHHHHHHH--
Confidence            99999999999999887654322    233544333  45566644332  1223457789999996  677777777  


Q ss_pred             HHHHhCCeeecCCccC--C-CCCceEEEEECCCCceEEEeechhhh
Q 022818          243 VTQELGGKITRQPGSI--P-GLNTKITSFVDPDGWKTVLVDNEDFL  285 (291)
Q Consensus       243 ~~~~~G~~~~~~~~~~--~-~~~~~~~~~~DpdG~~iel~~~~~~~  285 (291)
                        +++|+++..+|...  | ..+.+++||+|||||.|||++.....
T Consensus       241 --~~~G~~i~~~~~~~~~pg~~g~~~~~f~DPdG~~iEl~~~~~~~  284 (330)
T 3zi1_A          241 --KRENQKILTPLVSLDTPGKATVQVVILADPDGHEICFVGDEAFR  284 (330)
T ss_dssp             --HHTTCEEEEEEEEECCTTSCCEEEEEEECTTCCEEEEEEHHHHH
T ss_pred             --HHcCCcEecCceecccCCCCceEEEEEECCCCCEEEEEEecccc
Confidence              99999988776542  2 12358899999999999999987654

>1f1u_A Homoprotocatechuate 2,3-dioxygenase; extradiol, manganese, biodegradation, aromatic, oxidoreductase; 1.50A {Arthrobacter globiformis} SCOP: d.32.1.3 d.32.1.3 PDB: 1f1r_A 1f1v_A* 1f1x_A

Probab=100.00  E-value=5.2e-34  Score=244.05  Aligned_cols=238  Identities=20%  Similarity=0.230  Sum_probs=176.1

Q ss_pred             CCCcceeeEEEEEEeCCHHHHHHHHHhhcCCEEEEEeecCCCceeEEEEecCCCCcceEEEeeecCCCCcccCCCCceEE
Q 022818           17 PKKDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHF   96 (291)
Q Consensus        17 ~~~~~~~i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~~~~i   96 (291)
                      +..+++++.|+.|.|+|++++.+||+++|||++..+..   +   ..++...+......+.+...       ...+..|+
T Consensus        11 ~~~~i~~l~hv~l~v~Dl~~a~~FY~~vlG~~~~~~~~---~---~~~l~~~~~~~~~~l~l~~~-------~~~~~~~~   77 (323)
T 1f1u_A           11 PAPDIVRCAYMEIVVTDLAKSREFYVDVLGLHVTEEDE---N---TIYLRSLEEFIHHNLVLRQG-------PIAAVAAF   77 (323)
T ss_dssp             CCCCEEEEEEEEEEESCHHHHHHHHTTTTCCEEEEECS---S---EEEEECTTCCSSCSEEEEEC-------SSCEEEEE
T ss_pred             CCcccceeeEEEEEeCCHHHHHHHHHhCCCCEEeeecC---C---EEEEEecCCCCcEEEEEEEC-------CCCCeeEE
Confidence            45679999999999999999999999999999876532   1   34554322221222333322       12367899


Q ss_pred             EEEe---CCHHHHHHHHHHcCCeeecCCe-ecCCCceEEEEEECCCCCEEEEEeCCCC---------------CCCceEE
Q 022818           97 AIAT---EDVYKLVENIRAKGGNVTREPG-PLKGGTTHIAFVKDPDGYIFELIQRGPT---------------PEPLCQV  157 (291)
Q Consensus        97 ~~~v---~d~~~~~~~l~~~G~~~~~~~~-~~~~g~~~~~~~~Dp~G~~iel~~~~~~---------------~~~~~~v  157 (291)
                      +|.|   +|+++++++|+++|+++...+. ..+++.. .++|+||+||.|||++....               +.++.|+
T Consensus        78 ~f~v~~~~dl~~~~~~l~~~G~~~~~~~~~~~~~~g~-~~~~~DP~G~~iel~~~~~~~~~~~~~~~~~~~~~~~~l~Hv  156 (323)
T 1f1u_A           78 AYRVKSPAEVDAAEAYYKELGCRTERRKEGFTKGIGD-SVRVEDPLGFPYEFFYETEHVERLTQRYDLYSAGELVRLDHF  156 (323)
T ss_dssp             EEEESSHHHHHHHHHHHHHTTCCEEEETTCSSTTBCS-EEEEECTTSCEEEEECCBCCCCCCTTCGGGCCTTCCCEEEEE
T ss_pred             EEEeCCHHHHHHHHHHHHhCCCcEEeccccccCCcce-EEEEECCCCCEEEEEEecccccccccccccCCCCCCceeeeE
Confidence            9999   7899999999999999877655 3344344 48899999999999886432               2458999


Q ss_pred             EeeeCChhhhHHHHHHhcCCeeeeeeccCCccceEEEeccccCCceeEEEEeeecCcceeecCcceeEEEEEecchHH--
Q 022818          158 MLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDVYK--  235 (291)
Q Consensus       158 ~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~hi~~~v~di~~--  235 (291)
                      .|.|+|++++.+|| ++|||++......+++.....++..+..  +..+.+...       .+++++|++|.|+|+++  
T Consensus       157 ~l~v~D~~~a~~FY-~~LGf~~~~~~~~~~g~~~~~f~~~~~~--~~~~~~~~~-------~~~~~~Hiaf~v~d~d~v~  226 (323)
T 1f1u_A          157 NQVTPDVPRGRAYL-EDLGFRVSEDIKDSDGVTYAAWMHRKQT--VHDTALTGG-------NGPRMHHVAFATHEKHNII  226 (323)
T ss_dssp             EEEESCHHHHHHHH-HHTTCEEEEEEECTTCCEEEEEEESSSS--SCSEEEEES-------SBSEEEEEEEECSSHHHHH
T ss_pred             EEecCCHHHHHHHH-HhCCCeEEEEEEcCCCcEEEEEEEcCCC--cccEEEeCC-------CCCCceEEEEECCCHHHHH
Confidence            99999999999999 9999998876554444334455554332  233444321       12478999999999888  


Q ss_pred             -hHHHHHHHHHHhCC--eeecCCccCCCCCceEEEEECCCCceEEEeech
Q 022818          236 -SAEVVNLVTQELGG--KITRQPGSIPGLNTKITSFVDPDGWKTVLVDNE  282 (291)
Q Consensus       236 -~~~~l~~~~~~~G~--~~~~~~~~~~~~~~~~~~~~DpdG~~iel~~~~  282 (291)
                       ++++|    +++|+  ++..+|.++..++.+++||+||+||+|||+...
T Consensus       227 ~~~~~l----~~~G~~~~i~~~p~~~~~~~~~~~y~~DPdG~~iE~~~~~  272 (323)
T 1f1u_A          227 QICDKM----GALRISDRIERGPGRHGVSNAFYLYILDPDGHRIEIYTQD  272 (323)
T ss_dssp             HHHHHH----HHTTCGGGEEEEEEECSTTCCEEEEEECTTCCEEEEEECC
T ss_pred             HHHHHH----HHCCCccccccCCCccCCCCcEEEEEECCCCCEEEEEeCC
Confidence             77788    99999  888777766554568899999999999998653

>3lm4_A Catechol 2,3-dioxygenase; NYSGXRC, PSI-II, protein structure initiative, 2hydroxyl 6 OXO 6 phenyl hexa 2-4 dienoic acid, peroxide; HET: HPX; 1.80A {Rhodococcus jostii}

Probab=100.00  E-value=5.8e-34  Score=245.18  Aligned_cols=240  Identities=14%  Similarity=0.148  Sum_probs=176.5

Q ss_pred             CCcceeeEEEEEEeCCHHHHHHHHHhhcCCEEEEEeecCCCceeEEEEecCCCCcceEEEeeecCCCCcccCCCCceEEE
Q 022818           18 KKDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFA   97 (291)
Q Consensus        18 ~~~~~~i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~~~~i~   97 (291)
                      ...+++|+||.|.|+|++++.+||+++|||++..+..   +   ..++...+......+.+...       ...+..|++
T Consensus         6 ~~~i~~l~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~---~---~~~l~~~~~~~~~~l~l~~~-------~~~g~~~~a   72 (339)
T 3lm4_A            6 RFDIAHLARAELFSPKPQETLDFFTKFLGMYVTHREG---Q---SVYLRGYEDPYPWSLKITEA-------PEAGMGHAA   72 (339)
T ss_dssp             GGSEEEEEEEEEEESSHHHHHHHHHHTTCCEEEEEET---T---EEEEECTTCSSSCSEEEEEC-------SSCEEEEEE
T ss_pred             CCCCcEEEEEEEEeCCHHHHHHHHHhcCCCEEEEecC---C---EEEEEecCCCCceEEEEeeC-------CCCCcceEE
Confidence            3568999999999999999999999999999987632   1   24444322212222333322       134689999


Q ss_pred             EEeCC---HHHHHHHHHHcCCeeecCCeecCCCceEEEEEECCCCCEEEEEeCCC------------------------C
Q 022818           98 IATED---VYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRGP------------------------T  150 (291)
Q Consensus        98 ~~v~d---~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~Dp~G~~iel~~~~~------------------------~  150 (291)
                      |.|+|   +++++++|+++|+++...+. ..++.. .++|+||+||.|||+....                        .
T Consensus        73 f~v~~~~dld~~~~~l~~~G~~~~~~~~-~~~~~~-~~~f~DPdG~~iel~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~  150 (339)
T 3lm4_A           73 MRTSSPEALERRAKSLTDGNVDGTWSED-QFGYGK-TFEYQSPDGHNLQLLWEAEKYVAPPELRSKILTRPSKKPLQGIP  150 (339)
T ss_dssp             EEESSHHHHHHHHHHHHHTTCCEEEECC-STTBCC-EEEEECTTCCEEEEECCBCCCCCCGGGCCSSTTCSSCCCSBSSC
T ss_pred             EEeCCHHHHHHHHHHHHHCCCceeeccC-CCCceE-EEEEECCCCCEEEEEEeeeEcCCCccccccccCcccccCCCCCC
Confidence            99987   89999999999999876654 333333 4899999999999986521                        1


Q ss_pred             CCCceEEEeeeCChhhhHHHHHHhcCCeeeeeeccCCccceEEEeccccCCceeEEEEeeecCcceeecCcceeEEEEEe
Q 022818          151 PEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAIST  230 (291)
Q Consensus       151 ~~~~~~v~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~hi~~~v  230 (291)
                      +.++.|+.|.|+|++++.+||+++|||++..... +++.....++..+..  ...+.+.....    ....+.+|++|.|
T Consensus       151 ~~~l~Hv~l~v~D~~~a~~FY~~vLG~~~~~~~~-~~g~~~~~~l~~~~~--~~~l~~~~~~~----~~~~~~~Hiaf~v  223 (339)
T 3lm4_A          151 VKRIDHLNLMSSDVTAVKDSFERHLGFRTTERVV-DGNVEIGAWMSSNLL--GHEVACMRDMT----GGHGKLHHLAFFY  223 (339)
T ss_dssp             CCEEEEEEEEESCHHHHHHHHHHHHCCEEEEEEE-ETTEEEEEEEESSSS--SCSEEEEECTT----SCCSEEEEEEEEC
T ss_pred             cceeeeEEEEcCCHHHHHHHHHHhCCCeEEEEEe-cCCcEEEEEEEeCCC--ceEEEEeccCC----CCCCceeEEEEEe
Confidence            3468999999999999999999999999887755 333334555654433  33455543211    2334789999999


Q ss_pred             cc---hHHhHHHHHHHHHHhCCeeecCCccCCCCCceEEEEECCCCceEEEeechh
Q 022818          231 DD---VYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNED  283 (291)
Q Consensus       231 ~d---i~~~~~~l~~~~~~~G~~~~~~~~~~~~~~~~~~~~~DpdG~~iel~~~~~  283 (291)
                      +|   +++++++|    +++|+++..+|.++..+..+++||+||+||+|||+...+
T Consensus       224 ~d~~~v~~~~~~l----~~~G~~i~~~p~~~~~~~~~~~y~~DPdG~~iEl~~~~~  275 (339)
T 3lm4_A          224 GTGQHNIDAVEMF----RDYDIQIEAGPDKHGITQSQFLYVFEPGGNRIELFGEAG  275 (339)
T ss_dssp             CCHHHHHHHHHHH----HHTTCEEEEEEEEETGGGEEEEEEECTTSCEEEEECCCC
T ss_pred             CCHHHHHHHHHHH----HHCCCeEEeCCcccccCCceEEEEEcCCCCEEEEEEcCC
Confidence            99   66677777    999999988888765544688999999999999986544

>3oaj_A Putative ring-cleaving dioxygenase MHQO; structural genomics, protein structure initiative, PSI-biolo unknown function; 1.40A {Bacillus subtilis subsp}

Probab=100.00  E-value=4.1e-33  Score=238.82  Aligned_cols=244  Identities=11%  Similarity=0.095  Sum_probs=168.1

Q ss_pred             CcceeeEEEEEEeCCHHHHHHHHHhhcCCEEEEEeecCC-CceeEEEEecCCCCcceEEEeeecCCCCcccC-CCCceEE
Q 022818           19 KDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPE-EKYSNAFLGFGPEQSHFVVELTYNYGVTSYDI-GTGFGHF   96 (291)
Q Consensus        19 ~~~~~i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~-g~~~~~i   96 (291)
                      +++++|+||+|.|+|++++.+||+++|||+++.+....+ ......++..........+.+........... ..++.|+
T Consensus         4 ~~i~~i~Hv~l~v~Dl~~s~~FY~~vLGl~~v~~~~~~~~~~~~~l~~~~~~g~~g~~l~l~~~~~~~~~~~~~~~~~hi   83 (335)
T 3oaj_A            4 KKTMGIHHITAIVGHPQENTDFYAGVLGLRLVKQTVNFDDPGTYHLYFGNEGGKPGTIITFFPWAGARQGVIGDGQVGVT   83 (335)
T ss_dssp             CCCCSEEEEEEEESCHHHHHHHHTTTTCCEEEEEEECSSCTTSEEEEEESTTCCTTSEEEEEECTTCCBCBCCBSEEEEE
T ss_pred             ccCCcccEEEEEeCCHHHHHHHHHHhcCCEEEeeecCCCCCceEEEEEecCCCCCCcEEEEEECCCCCCCCCCCCceEEE
Confidence            468999999999999999999999999999988754332 22233344332222233455544332222222 2367899


Q ss_pred             EEEeC--CHHHHHHHHHHcCCeeecCCeecCCCceEEEEEECCCCCEEEEEeCCCC---------------CCCceEEEe
Q 022818           97 AIATE--DVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRGPT---------------PEPLCQVML  159 (291)
Q Consensus        97 ~~~v~--d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~Dp~G~~iel~~~~~~---------------~~~~~~v~l  159 (291)
                      +|.|+  |++++.++|+++|+++..  .. .+|. ..+||+|||||.|||++..+.               ..++.||+|
T Consensus        84 af~V~~~dl~~~~~rL~~~Gv~~~~--~~-~~g~-~~~~f~DPdGn~iEl~~~~~~~~~~~~~~~v~~~~~i~gl~Hv~L  159 (335)
T 3oaj_A           84 SYVVPKGAMAFWEKRLEKFNVPYTK--IE-RFGE-QYVEFDDPHGLHLEIVEREEGEANTWTFGEVTPDVAIKGFGGATL  159 (335)
T ss_dssp             EEEECTTCHHHHHHHHHHTTCCCEE--EE-ETTE-EEEEEECTTSCEEEEEECSCSCCCCCCBTTBCTTTSCCEEEEEEE
T ss_pred             EEEecHHHHHHHHHHHHhCcceeee--ec-cCCc-EEEEEECCCCCEEEEEEeCCCCcCCCcCCCCChhhhhccccceEE
Confidence            99999  999999999999998764  22 2333 459999999999999997632               135899999


Q ss_pred             eeCChhhhHHHHHHhcCCeeeeeeccCCccceEEEeccccCCceeEEEEeeecCccee-ecCcceeEEEEEecc---hHH
Q 022818          160 RVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEY-TKGNAYAQVAISTDD---VYK  235 (291)
Q Consensus       160 ~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~-~~~~~~~hi~~~v~d---i~~  235 (291)
                      .|+|++++.+||+++|||++....+   . . .. +..+..  +..+.+......... ....+++|+||.|+|   +++
T Consensus       160 ~v~Dle~t~~FY~~vLG~~~~~~~~---~-~-~~-~~~g~~--~~~l~l~~~~~~~~~~~g~g~~~HiAf~v~d~~~l~~  231 (335)
T 3oaj_A          160 LSEQPDKTADLLENIMGLERVGKEG---D-F-VR-YRSAGD--IGNVIDLKLTPIGRGQMGAGTVHHIAWRANDDEDQLD  231 (335)
T ss_dssp             ECSSHHHHHHHHHHTSCCEEEEEET---T-E-EE-EECSSS--SSCEEEEESSCCCBCBCSBTEEEEEEEEESSHHHHHH
T ss_pred             EECCHHHHHHHHHHHhCCEEeeccC---C-E-EE-EEeCCC--CcEEEEEeCCCCCcCCCCCcceEEEEEEcCCHHHHHH
Confidence            9999999999999999999886532   1 1 22 221221  234444432221111 122368999999998   334


Q ss_pred             hHHHHHHHHHHhCCeeecCCccCCCCCceEEEEECCCCceEEEeec
Q 022818          236 SAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDN  281 (291)
Q Consensus       236 ~~~~l~~~~~~~G~~~~~~~~~~~~~~~~~~~~~DpdG~~iel~~~  281 (291)
                      +.++|    +++|+.+... ....+  .+.+||+||+||+|||...
T Consensus       232 ~~~~L----~~~G~~~~~~-~~r~~--~~siYfrDP~G~~iEl~td  270 (335)
T 3oaj_A          232 WQRYI----ASHGYGVTPV-RDRNY--FNAIYFREHGEILFEIATD  270 (335)
T ss_dssp             HHHHH----HHTTCCCCCC-EECSS--SEEEEEECTTSCEEEEEES
T ss_pred             HHHHH----HHCCCCcccc-ccCCc--EEEEEEECCCCcEEEEEeC
Confidence            55555    9999986433 22323  3789999999999999987

>3hpy_A Catechol 2,3-dioxygenase; repeated motifs, aromatic hydrocarbons catabolism, iron, oxidoreductase; 1.94A {Pseudomonas SP} PDB: 3hpv_A 3hq0_A*

Probab=100.00  E-value=6.5e-33  Score=235.94  Aligned_cols=239  Identities=17%  Similarity=0.177  Sum_probs=171.4

Q ss_pred             CcceeeEEEEEEeCCHHHHHHHHHhhcCCEEEEEeecCCCceeEEEEec-CCCCcceEEEeeecCCCCcccCCCCceEEE
Q 022818           19 KDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGF-GPEQSHFVVELTYNYGVTSYDIGTGFGHFA   97 (291)
Q Consensus        19 ~~~~~i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~~~~~~~~~~~~g~~~~~i~   97 (291)
                      +.+++|+||.|.|+|++++.+||+++|||++..+..  ++   ..++.. ++.. ...+.+...       ...+..|++
T Consensus         4 ~~i~~i~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~--~~---~~~l~~~~~~~-~~~l~l~~~-------~~~~~~h~a   70 (309)
T 3hpy_A            4 TGVLRPGHAQVRVLNLEEGIHFYRNVLGLVETGRDD--QG---RVYFKCWDERD-HSCYIIREA-------DTAGIDFFG   70 (309)
T ss_dssp             CSEEEEEEEEEEESSHHHHHHHHHHTSCCEEEEECT--TS---CEEEECTTCCB-SCSEEEEEC-------SSCEEEEEE
T ss_pred             cccceeeEEEEEcCCHHHHHHHHHhccCCEEEEEcC--CC---eEEEEeccCCC-ceEEEEEeC-------CCCceeEEE
Confidence            457899999999999999999999999999986632  11   244443 3222 122333222       123788999


Q ss_pred             EEeCC---HHHHHHHHHHcCCeeecCCeecCCCceEEEEEECCCCCEEEEEeCCCC----------------------CC
Q 022818           98 IATED---VYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRGPT----------------------PE  152 (291)
Q Consensus        98 ~~v~d---~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~Dp~G~~iel~~~~~~----------------------~~  152 (291)
                      |.|++   +++++++|+++|+++...+.....+..+.++|+||+||.|||++....                      +.
T Consensus        71 ~~v~~~~dl~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~f~DPdG~~iel~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~  150 (309)
T 3hpy_A           71 FKVLDKATLEKLDADLQAYGLTTTRIPAGEMLETGERVRFELPSGHLIELYAEKTCVGNGISEVNPAPWNAQREHGIAPI  150 (309)
T ss_dssp             EEESCHHHHHHHHHHHHHHTCCCEEECTTSSTTBCCEEEEECTTSCEEEEESCBCBCCCSSCSBSCCSCCGGGGSSSCCS
T ss_pred             EEECCHHHHHHHHHHHHhCCCceeeccCCccCCCeeEEEEECCCCCEEEEEEccceecccccccCCCCCccccCCCcccc
Confidence            99986   999999999999988765443212233358999999999999986421                      24


Q ss_pred             CceEEEeeeCChhhhHHHHHHhcCCeeeeeeccCC-ccceEEEeccccCCceeEEEEeeecCcceeecCcceeEEEEEec
Q 022818          153 PLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPE-YKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTD  231 (291)
Q Consensus       153 ~~~~v~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~hi~~~v~  231 (291)
                      ++.|+.|.|+|++++.+||+++|||++......+. +.....++..+..  ...+.+...      +.+.+..|++|.|+
T Consensus       151 ~i~Hv~l~v~D~~~~~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~------~~~~~~~Hiaf~v~  222 (309)
T 3hpy_A          151 QLDHCLLYGPNIAEVQKIFTEVLGFYLVERVLSPDGDSDMGIWLSCSHK--VHDIAFVEY------PEKGKLHHCSFLLE  222 (309)
T ss_dssp             EEEEEEEEESCHHHHHHHHHHTSCCEEEEEEECSSSCSEEEEEEESSSS--SCSEEEEEC------SSTTEEEEEEEECS
T ss_pred             eeeeEEEEeCCHHHHHHHHHHhcCCEEEEEEecCCCCceEEEEEecCCC--ceeEEEecC------CCCCceeEEEEECC
Confidence            58999999999999999999999999877654332 2234555554332  223333221      12346899999999


Q ss_pred             chHH---hHHHHHHHHHHhCCeeecCCccCCCCCceEEEEECCCCceEEEeech
Q 022818          232 DVYK---SAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNE  282 (291)
Q Consensus       232 di~~---~~~~l~~~~~~~G~~~~~~~~~~~~~~~~~~~~~DpdG~~iel~~~~  282 (291)
                      |+++   ++++|    +++|+++...|...+.++.+++||+|||||+|||+...
T Consensus       223 d~~~v~~~~~~l----~~~G~~~~~~p~~~~~~~~~~~y~~DPdG~~iE~~~~g  272 (309)
T 3hpy_A          223 SWEQVLRAGDIM----SMNEVNVDIGPTRHGVTRGCTIYAWDPSGNRFETFMGG  272 (309)
T ss_dssp             SHHHHHHHHHHH----HHTTCCBSSCSEECSSSSEEEEEEECTTSCEEEEEEEC
T ss_pred             CHHHHHHHHHHH----HHCCCEEEeCCccCCCCccEEEEEECCCCCEEEEEeCC
Confidence            8655   34555    99999998888776655568899999999999998763

>1zsw_A Metallo protein, glyoxalase family protein; hypothetical protein from glyoxalase family, structural GENO PSI, protein structure initiative; 1.65A {Bacillus cereus} SCOP: d.32.1.10 d.32.1.10

Probab=100.00  E-value=2e-32  Score=235.68  Aligned_cols=252  Identities=12%  Similarity=0.058  Sum_probs=171.0

Q ss_pred             CCCCCcceeeEEEEEEeCCHHHHHHHHHhhcCCEEEEEeecCC-CceeEEEEecCCCCcceEEEeeecCCCCc-ccCCCC
Q 022818           15 EWPKKDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPE-EKYSNAFLGFGPEQSHFVVELTYNYGVTS-YDIGTG   92 (291)
Q Consensus        15 ~~~~~~~~~i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~~~~~~~~-~~~g~~   92 (291)
                      ..+++++++|+||.|.|+|++++++||+++|||++..+....+ ......++..+.......+.+........ .....+
T Consensus        22 ~~~m~~i~~i~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~l~l~~~~~~~~~~~~~~~  101 (338)
T 1zsw_A           22 SNAMYEIKGHHHISMVTKNANENNHFYKNVLGLRRVKMTVNQDDPSMYHLFYGDKTGSPGTELSFFEIPLVGRTYRGTNA  101 (338)
T ss_dssp             SCCSSCCCSEEEEEEEESCHHHHHHHHHTTTCCEEEEEEEETTEEEEEEEEEESTTCCTTSEEEEEECTTCCBCBCCBSE
T ss_pred             cCccCcCccccEEEEEcCCHHHHHHHHHHhcCCEEEEeecccCCCceEEEEEcCCCCCCCCEEEEEECCCCccCcCCCCC
Confidence            3334468999999999999999999999999999976542111 11122333322111233444443222111 112246


Q ss_pred             ceEEEEEeC---CHHHHHHHHHHcCCeeecCCeecCCCceEEEEEECCCCCEEEEEeCCCC------------------C
Q 022818           93 FGHFAIATE---DVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRGPT------------------P  151 (291)
Q Consensus        93 ~~~i~~~v~---d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~Dp~G~~iel~~~~~~------------------~  151 (291)
                      ..|++|.|+   |+++++++|+++|+++..++.  .+|. +.++|+|||||.|||++....                  .
T Consensus       102 ~~hiaf~v~~~~dld~~~~~l~~~G~~~~~~~~--~~G~-~~~~f~DPdG~~iel~~~~~~~~~~~~p~~~~~~~~~~~~  178 (338)
T 1zsw_A          102 ITRIGLLVPSEDSLHYWKERFEKFDVKHSEMTT--YANR-PALQFEDAEGLRLVLLVSNGEKVEHWETWEKSEVPAKHQI  178 (338)
T ss_dssp             EEEEEEEESCHHHHHHHHHHHHHTTCEECCSEE--ETTE-EEEEEECTTCCEEEEEECTTCCCTTCCCCTTCSSCGGGSC
T ss_pred             eeeEEEEcCCHHHHHHHHHHHHHCCCccccccc--cCCc-EEEEEECCCCCEEEEEEcCCccccccCcCcCCCCCccccC
Confidence            789999998   799999999999999876554  2454 458999999999999997631                  2


Q ss_pred             CCceEEEeeeCChhhhHHHHHHhcCCeeeeeeccCCccceEEEeccccCCceeEEEEeeecCcceeecCcceeEEEEEec
Q 022818          152 EPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTD  231 (291)
Q Consensus       152 ~~~~~v~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~hi~~~v~  231 (291)
                      .++.|+.|.|+|++++++||+++|||++....+    .+..+..+. .+.....+.+.. ..........++.|++|.|+
T Consensus       179 ~~l~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~~----~~~~~~~~~-~g~~~~~~~~~~-~~~~~~~~~~~~~hiaf~v~  252 (338)
T 1zsw_A          179 QGMGSVELTVRRLDKMASTLTEIFGYTEVSRND----QEAIFQSIK-GEAFGEIVVKYL-DGPTEKPGRGSIHHLAIRVK  252 (338)
T ss_dssp             CEEEEEEEEESCHHHHHHHHHHTTCCEEEEECS----SEEEEESST-TCSTTCEEEEEC-CSSBCBCCBTCEEEEEEEES
T ss_pred             ceEEEEEEEECCHHHHHHHHHHhcCCEEEeecC----CeEEEEecC-CCCceEEEEecc-CCCCCCCCCCceEEEEEEeC
Confidence            358899999999999999999999999876542    122222210 111012333322 11111112246789999999


Q ss_pred             ---chHHhHHHHHHHHHHhCCeeecCCccCCCCCceEEEEECCCCceEEEeech
Q 022818          232 ---DVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNE  282 (291)
Q Consensus       232 ---di~~~~~~l~~~~~~~G~~~~~~~~~~~~~~~~~~~~~DpdG~~iel~~~~  282 (291)
                         |+++++++|    +++|+++. +|....  +.+.+||+|||||.|||++..
T Consensus       253 ~~~dv~~~~~~l----~~~G~~~~-~~~~~~--~~~~~~~~DPdG~~iEl~~~~  299 (338)
T 1zsw_A          253 NDAELAYWEEQV----KQRGFHSS-GIIDRF--YFKSLYFRESNGILFEIATDG  299 (338)
T ss_dssp             SHHHHHHHHHHH----HHTTCCCC-CCEECS--SEEEEEEECTTCCEEEEEEEE
T ss_pred             CHHHHHHHHHHH----HHCCCcee-eeeecC--ceEEEEEECCCCCEEEEEEcC
Confidence               688888888    99999985 554442  358899999999999999864

>1mpy_A Catechol 2,3-dioxygenase; extradiol dioxygenase, non heme iron dioxygenase, metapyrocatechase, oxidoreductase; 2.80A {Pseudomonas putida} SCOP: d.32.1.3 d.32.1.3

Probab=100.00  E-value=5e-33  Score=236.41  Aligned_cols=240  Identities=18%  Similarity=0.250  Sum_probs=168.9

Q ss_pred             CcceeeEEEEEEeCCHHHHHHHHHhhcCCEEEEEeecCCCceeEEEEecCCCCcceEEEeeecCCCCcccCCCCceEEEE
Q 022818           19 KDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAI   98 (291)
Q Consensus        19 ~~~~~i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~~~~i~~   98 (291)
                      .++++++||.|.|+|++++.+||+++|||++..+...  +   ..++..+.....+.+.+...       ..++..|++|
T Consensus         3 ~~i~~i~hv~l~v~Dl~~a~~FY~~~lG~~~~~~~~~--~---~~~l~~~~~~~~~~l~~~~~-------~~~~~~~~~f   70 (307)
T 1mpy_A            3 KGVMRPGHVQLRVLDMSKALEHYVELLGLIEMDRDDQ--G---RVYLKAWTEVDKFSLVLREA-------DEPGMDFMGF   70 (307)
T ss_dssp             TSEEEEEEEEEEESCHHHHHHHHHHTTCCEEEEECTT--S---CEEEECTTCCBSCSEEEEEC-------SSCEEEEEEE
T ss_pred             cccceeeeEEEEeCCHHHHHHHHHHccCCEEEeecCC--C---cEEEEecCCCCceEEEEccC-------CCCCcceEEE
Confidence            3589999999999999999999999999999865321  1   24555433212222222221       1236789999


Q ss_pred             Ee---CCHHHHHHHHHHcCCeeecCCe-ecCCCceEEEEEECCCCCEEEEEeCCC----------------------CCC
Q 022818           99 AT---EDVYKLVENIRAKGGNVTREPG-PLKGGTTHIAFVKDPDGYIFELIQRGP----------------------TPE  152 (291)
Q Consensus        99 ~v---~d~~~~~~~l~~~G~~~~~~~~-~~~~g~~~~~~~~Dp~G~~iel~~~~~----------------------~~~  152 (291)
                      .|   +|+++++++|+++|+++...+. ..+++.. .++|+||+||.|||++...                      ...
T Consensus        71 ~v~~~~dv~~~~~~l~~~G~~~~~~~~~~~~~~~~-~~~~~DPdG~~iel~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  149 (307)
T 1mpy_A           71 KVVDEDALRQLERDLMAYGCAVEQLPAGELNSCGR-RVRFQAPSGHHFELYADKEYTGKWGLNDVNPEAWPRDLKGMAAV  149 (307)
T ss_dssp             EESCHHHHHHHHHHHHHHTCCCEEECTTSSTTBCC-EEEEECTTSCEEEEESCBCBCCSTTCCSBSCCSSCSCCCTTCCC
T ss_pred             EeCCHHHHHHHHHHHHHcCCceecCCcccCCCceE-EEEEECCCCCEEEEEEcchhcccccccccCCcCCcccCCCCCcC
Confidence            99   8999999999999999876654 2333333 4889999999999998531                      123


Q ss_pred             CceEEEeeeCChhhhHHHHHHhcCCeeeeeeccCCccceEEEeccccCCceeEEEEeeecCcceeecCcceeEEEEEecc
Q 022818          153 PLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDD  232 (291)
Q Consensus       153 ~~~~v~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~hi~~~v~d  232 (291)
                      ++.|+.|.|+|++++++||+++|||++........+.....++.....  +..+++...      +...+..|++|.|+|
T Consensus       150 ~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~l~~~~~--~~~~~~~~~------~~~g~~~hi~f~v~d  221 (307)
T 1mpy_A          150 RFDHALMYGDELPATYDLFTKVLGFYLAEQVLDENGTRVAQFLSLSTK--AHDVAFIHH------PEKGRLHHVSFHLET  221 (307)
T ss_dssp             EEEEEEEEESCHHHHHHHHHHTTCCEEEEEEECTTCCEEEEEEESSSB--SCSEEEEEC------SSSSEEEEEEEECSC
T ss_pred             ceeeEEEEcCCHHHHHHHHHHHcCCeeEeeeecCCCcEEEEEEEcCCC--ceeEEEecC------CCCCcceEEEEEcCC
Confidence            589999999999999999999999998765432222111223333222  222333221      111237999999994


Q ss_pred             ---hHHhHHHHHHHHHHhCCeeecCCccCCCCCceEEEEECCCCceEEEeechh
Q 022818          233 ---VYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNED  283 (291)
Q Consensus       233 ---i~~~~~~l~~~~~~~G~~~~~~~~~~~~~~~~~~~~~DpdG~~iel~~~~~  283 (291)
                         +++++++|    +++|+++..+|...+...++.+||+|||||+|||++...
T Consensus       222 ~~dv~~~~~~l----~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~~  271 (307)
T 1mpy_A          222 WEDLLRAADLI----SMTDTSIDIGPTRHGLTHGKTIYFFDPSGNRNEVFCGGD  271 (307)
T ss_dssp             HHHHHHHHHHH----HHHTCCEEEEEEECSSTTCEEEEEECTTSCEEEEEECCC
T ss_pred             HHHHHHHHHHH----HHCCCceeeCCccCCCCCceEEEEECCCCcEEEEEeccc
Confidence               55666777    999999887777655433578999999999999998643

>4ghg_A Homoprotocatechuate 2,3-dioxygenase; oxygen activation, Fe(II), 2-His-1-carboxylate triad, 4-nitrocatechol, OXY complex, oxidoreductase; HET: P6G PG4 DHY; 1.50A {Brevibacterium fuscum} PDB: 1q0o_A 1q0c_A 2iga_A* 2ig9_A 3ojj_A* 3bza_A* 3ojk_A* 3ojt_A* 3ojn_A* 4ghh_A* 4ghc_A 4ghd_A* 4ghe_A* 4ghf_A* 3eck_A* 3ecj_A*

Probab=100.00  E-value=1.4e-32  Score=237.74  Aligned_cols=242  Identities=21%  Similarity=0.208  Sum_probs=177.8

Q ss_pred             CCcceeeEEEEEEeCCHHHHHHHHHhhcCCEEEEEeecCCCceeEEEEecCCCCcceEEEeeecCCCCcccCCCCceEEE
Q 022818           18 KKDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFA   97 (291)
Q Consensus        18 ~~~~~~i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~~~~i~   97 (291)
                      ...|++|.||.|.|+|++++.+||+++|||++..+.+      ..++|...+....+.+.+...       ...++.|++
T Consensus        12 ~p~I~rl~hV~l~V~DLe~s~~FY~dvLGL~~~~~~~------~~~~lr~~~~~~~~~l~l~~~-------~~~gl~~~a   78 (365)
T 4ghg_A           12 APDILRCAYAELVVTDLAKSRNFYVDVLGLHVSYEDE------NQIYLRSFEEFIHHNLVLTKG-------PVAALKAMA   78 (365)
T ss_dssp             CCCEEEEEEEEEEESCHHHHHHHHTTTTCCEEEEECS------SEEEEECTTCCSSCSEEEEEC-------SSCEEEEEE
T ss_pred             CCCCCEEEEEEEEeCCHHHHHHHHhhCCCCEEEEEcC------CEEEEEeCCCCcceEEEeccC-------CCCCcceEE
Confidence            3469999999999999999999999999999987643      235565544333333434332       123788999


Q ss_pred             EEeCC---HHHHHHHHHHcCCeeecCCeecCCCceEEEEEECCCCCEEEEEeCCCC---------------CCCceEEEe
Q 022818           98 IATED---VYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRGPT---------------PEPLCQVML  159 (291)
Q Consensus        98 ~~v~d---~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~Dp~G~~iel~~~~~~---------------~~~~~~v~l  159 (291)
                      |.|.+   ++++.++|+++|+.+...+.....+....++|.||+||.|||+.....               +.++.||+|
T Consensus        79 ~~v~s~~dLd~~~~~L~~~Gv~v~~~~~~~~~~~g~~~~f~DPdG~~iEl~~~~~~~~~~~~~~~~~~~~~~~rlgHV~L  158 (365)
T 4ghg_A           79 FRVRTPEDVDKAEAYYQELGCRTERRKDGFVKGIGDALRVEDPLGFPYEFFFETTHVERLHMRYDLYSAGELVRLDHFNQ  158 (365)
T ss_dssp             EEESSHHHHHHHHHHHHHTTCCEEEETTCSSTTBCSEEEEECTTSCEEEEECCBCCCCCCTTCTTTCCTTCCCEEEEEEE
T ss_pred             EEeCCHHHHHHHHHHHHHcCCcceeccccccCCCceEEEEECCCCCEEEEEEEeeccccccccccccccccCcceeEEEE
Confidence            99964   888999999999987765443322333348999999999999875421               246999999


Q ss_pred             eeCChhhhHHHHHHhcCCeeeeeeccCCccceEEEeccccCCceeEEEEeeecCcceeecCcceeEEEEEecchHHhHHH
Q 022818          160 RVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDVYKSAEV  239 (291)
Q Consensus       160 ~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~hi~~~v~di~~~~~~  239 (291)
                      .|.|++++..||+. |||++......+++.....++.....  +..+.+..       ..+++++|++|.|+|+++..+.
T Consensus       159 ~v~D~~~t~~Fy~~-LGf~~sd~~~~~~g~~~~~f~~~~~~--hH~la~~~-------~~~~~lhHvaf~v~d~d~v~~~  228 (365)
T 4ghg_A          159 VTPDVPRGRKYLED-LGFRVTEDIQDDEGTTYAAWMHRKGT--VHDTALTG-------GNGPRLHHVAFSTHEKHNIIQI  228 (365)
T ss_dssp             EESCHHHHHHHHHH-TTCEEEEEEECTTSCEEEEEEESSSS--SCSEEEEE-------SSBSEEEEEEEECSSHHHHHHH
T ss_pred             eecCHHHHHHHHHh-cCCEEEEEEecCCCceeEEeeecCCc--ccceeeec-------CCCCceeEEEEecCCHHHHHHH
Confidence            99999999999965 99998877766666556667765443  33344432       2235899999999997665543


Q ss_pred             HHHHHHHhCCe--eecCCccCCCCCceEEEEECCCCceEEEeechh
Q 022818          240 VNLVTQELGGK--ITRQPGSIPGLNTKITSFVDPDGWKTVLVDNED  283 (291)
Q Consensus       240 l~~~~~~~G~~--~~~~~~~~~~~~~~~~~~~DpdG~~iel~~~~~  283 (291)
                      . .++.++|+.  +...|+++..+...++||+||+||+||+.....
T Consensus       229 ~-d~l~~~g~~~~i~~GpgRH~~~~~~f~Y~~dP~G~~iE~~t~g~  273 (365)
T 4ghg_A          229 C-DKMGALRISDRIERGPGRHGVSNAFYLYILDPDNHRIEIYTQDY  273 (365)
T ss_dssp             H-HHHHHTTCGGGEEEEEEECSTTCCEEEEEECTTCCEEEEEECCC
T ss_pred             H-HHHHhCCCCceeEeCCCccCCCCcEEEEEECCCCceEEEEcCCc
Confidence            3 445888884  556788776555688999999999999986654

>3oxh_A RV0577 protein; kinase regulation, antibiotic resistance, mycobacterium tube structural genomics, PSI, protein structure initiative; HET: PMB XYL; 1.75A {Mycobacterium tuberculosis}

Probab=100.00  E-value=1e-32  Score=231.38  Aligned_cols=242  Identities=19%  Similarity=0.200  Sum_probs=170.6

Q ss_pred             ceeeEEEEEEeCCHHHHHHHHHhhcCCEEEEEeecCCC-ceeEEEEecCCCCcceEEEeeecCCCCcccCCCCceEEEEE
Q 022818           21 KRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEE-KYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIA   99 (291)
Q Consensus        21 ~~~i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~~~~i~~~   99 (291)
                      ...+.|+.|.|+|++++++||+++|||++......... .+.  .+..++..   ...+.......+ .......+++|.
T Consensus        30 ~g~~~~v~l~v~D~~~a~~FY~~vlG~~~~~~~~~~~~~~~~--~~~~~g~~---~~~l~~~~~~~~-~~~~~~~~~~~~  103 (282)
T 3oxh_A           30 QGTPNWVDLQTTDQSAAKKFYTSLFGWGYDDNPVPGGGGVYS--MATLNGEA---VAAIAPMPPGAP-EGMPPIWNTYIA  103 (282)
T ss_dssp             TTSEEEEEEEESCHHHHHHHHHHHHCCEEEEEC-----CCEE--EEEETTEE---EEEEEECCSCC----CCCEEEEEEE
T ss_pred             CCCcEEEEEecCCHHHHHHHHHHhcCcEEeecCCCCCccCEE--EEEeCCee---eEeeccCCCCCC-CCCCCcEEEEEE
Confidence            35799999999999999999999999998765321110 222  23332211   112222111111 123356789999


Q ss_pred             eCCHHHHHHHHHHcCCeeecCCeecCCCceEEEEEECCCCCEEEEEeCCCC--------CCCceEEEeeeCChhhhHHHH
Q 022818          100 TEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRGPT--------PEPLCQVMLRVGDLGRSIKFY  171 (291)
Q Consensus       100 v~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~Dp~G~~iel~~~~~~--------~~~~~~v~l~v~d~~~~~~fy  171 (291)
                      |+|+++++++|+++|+++..+|...++.. ++++|+||+||.|+|++....        +..+.|+.|.|+|++++++||
T Consensus       104 v~d~d~~~~~l~~~G~~~~~~p~~~~~~g-~~~~~~DP~G~~i~l~~~~~~~~~~~~~~~~~~~~~~l~v~D~~~a~~FY  182 (282)
T 3oxh_A          104 VDDVDAVVDKVVPGGGQVMMPAFDIGDAG-RMSFITDPTGAAVGLWQANRHIGATLVNETGTLIWNELLTDKPDLALAFY  182 (282)
T ss_dssp             CSCHHHHHTTTTTTTCEEEEEEEEETTTE-EEEEEECTTCCEEEEEEESSCCSCSBCSSTTSEEEEEEECSCHHHHHHHH
T ss_pred             eCCHHHHHHHHHHCCCEEEECCEecCCCe-EEEEEECCCCCEEEEEEccccCCccccCCCCccEEEEEEcCCHHHHHHHH
Confidence            99999999999999999988877766433 458999999999999997643        457999999999999999999


Q ss_pred             HHhcCCeeeeeeccCCccceEEEeccccCCceeEEEEeeecCcceeecCcceeEEEEEecchHHhHHHHHHHHHHhCCee
Q 022818          172 EKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKI  251 (291)
Q Consensus       172 ~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~hi~~~v~di~~~~~~l~~~~~~~G~~~  251 (291)
                      +++|||++......++..+..+...  .   .....+.. ...   ...++..|++|.|+|++++++++    +++|+++
T Consensus       183 ~~vlG~~~~~~~~~~~~~~~~~~~~--~---~~~~~~~~-~~~---~~~~~~~~~~~~v~dvd~~~~~~----~~~G~~~  249 (282)
T 3oxh_A          183 EAVVGLTHSSMEIAAGQNYRVLKAG--D---AEVGGCME-PPM---PGVPNHWHVYFAVDDADATAAKA----AAAGGQV  249 (282)
T ss_dssp             HHHHCCEEEEC-------CEEEEET--T---EEEEEEEC-CSS---TTCCSEEEEEEECSCHHHHHHHH----HHTTCEE
T ss_pred             HHHhCCeeeeccCCCCcceEEEEcC--C---ccEeeecC-CCC---CCCCCeEEEEEEeCCHHHHHHHH----HHcCCEE
Confidence            9999999775431222334333322  2   11112211 111   12346689999999999999999    9999999


Q ss_pred             ecCCccCCCCCceEEEEECCCCceEEEeechh
Q 022818          252 TRQPGSIPGLNTKITSFVDPDGWKTVLVDNED  283 (291)
Q Consensus       252 ~~~~~~~~~~~~~~~~~~DpdG~~iel~~~~~  283 (291)
                      ..+|...++ +++++||+||+||.|||++..+
T Consensus       250 ~~~p~~~~~-~~~~~~~~DPdGn~~~l~~~~~  280 (282)
T 3oxh_A          250 IAEPADIPS-VGRFAVLSDPQGAIFSVLKAAP  280 (282)
T ss_dssp             EEEEEEETT-TEEEEEEECTTSCEEEEEEEC-
T ss_pred             ecCCeEcCC-CeEEEEEECCCCCEEEEEecCC
Confidence            998888776 4689999999999999998754

>3b59_A Glyoxalase/bleomycin resistance protein/dioxygena; 11004Z, NYSGXRC, PSI-2, structural genomics, Pro structure initiative; 2.53A {Novosphingobium aromaticivorans}

Probab=100.00  E-value=1.9e-32  Score=233.02  Aligned_cols=232  Identities=22%  Similarity=0.326  Sum_probs=174.3

Q ss_pred             CcceeeEEEEEEeCCHHHHHHHHHhhcCCEEEEEeecCCCceeEEEEecCCCCcceEEEeeecCCCCcccCCCCceEEEE
Q 022818           19 KDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAI   98 (291)
Q Consensus        19 ~~~~~i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~~~~i~~   98 (291)
                      +++++|.|+.|.|+|++++.+||+++|||++.....  +    ..++..++......+.+...       ...+..|++|
T Consensus         4 ~~i~~l~~v~l~v~Dl~~a~~FY~~vlG~~~~~~~~--~----~~~l~~~~~~~~~~l~l~~~-------~~~~~~~~~~   70 (310)
T 3b59_A            4 SRVTEIRYVGYGVKDFDAEKAFYADVWGLEPVGEDA--N----NAWFKAQGADEHHVVQLRRA-------DENRIDVIAL   70 (310)
T ss_dssp             CCEEEEEEEEEEESSHHHHHHHHHHTTCCEEEEECS--S----EEEEECTTSCCSCSEEEEEC-------SSCEEEEEEE
T ss_pred             eecceeeEEEEecCCHHHHHHHHHhCcCCEEeeecC--C----eEEEEECCCCCCEEEEEEEC-------CCCCeeEEEE
Confidence            568999999999999999999999999999876532  1    34555443101122333322       1246789999


Q ss_pred             Ee---CCHHHHHHHHHHcCCeeecCCee--cCCCceEEEEEECCCCCEEEEEeCCCC------------CCCceEEEeee
Q 022818           99 AT---EDVYKLVENIRAKGGNVTREPGP--LKGGTTHIAFVKDPDGYIFELIQRGPT------------PEPLCQVMLRV  161 (291)
Q Consensus        99 ~v---~d~~~~~~~l~~~G~~~~~~~~~--~~~g~~~~~~~~Dp~G~~iel~~~~~~------------~~~~~~v~l~v  161 (291)
                      .|   +|+++++++|+++|+++...+..  .+++... ++|+||+||.|+|++....            +.++.|+.|.|
T Consensus        71 ~v~~~~dld~~~~~l~~~G~~~~~~~~~~~~~~~~~~-~~~~DPdG~~iel~~~~~~~~~~~~~~~~~~~~~l~hv~l~v  149 (310)
T 3b59_A           71 AADSRSDVDALRASVEAAGCKVASEPAVLATPGGGYG-FRFFSPDGLLFEVSSDVAKGAKRDLARWEGVPVKISHIVLHS  149 (310)
T ss_dssp             EESSHHHHHHHHHHHHHHTCCBCCCSEECCSTTCCEE-EEEECTTSCEEEEEECCCCCCCCCCCTTCCCCCEEEEEEEEE
T ss_pred             EeCCHHHHHHHHHHHHhCCCeEeecCccccccCCceE-EEEECCCCCEEEEEEcccccCCCccCCCCCcCcEeceEEEec
Confidence            98   78999999999999998887765  4454544 7899999999999987531            34689999999


Q ss_pred             CChhhhHHHHHHhcCCeeeeeeccCCccceEEEeccccCCceeEEEEeeecCcceeecCcceeEEEEEecchHHh---HH
Q 022818          162 GDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDVYKS---AE  238 (291)
Q Consensus       162 ~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~hi~~~v~di~~~---~~  238 (291)
                      +|++++.+||+++|||++.....  +   ...++..+..  +..+.+...       . +++.|++|.|+|+++.   ++
T Consensus       150 ~D~~~a~~FY~~~LG~~~~~~~~--~---~~~fl~~~~~--~~~l~l~~~-------~-~g~~hi~f~v~d~d~~~~~~~  214 (310)
T 3b59_A          150 PNHQDMVKFFTDVLGFKVSDWLG--D---FMCFLRCNSA--HHRIAILPG-------P-PCLNHVAYDMLSVDDMMRGAH  214 (310)
T ss_dssp             TTHHHHHHHHHHTSCCEEEEEET--T---TEEEEESSSB--SCSEEEEES-------S-SEEEEEEEECSSHHHHHHHHH
T ss_pred             CCHHHHHHHHHhCCCCEEEEeeC--C---eEEEEecCCC--cceEEEECC-------C-CceEEEEEEcCCHHHHHHHHH
Confidence            99999999999999999876542  1   2334443322  334444321       1 5689999999997766   77


Q ss_pred             HHHHHHHHhCCeeecCCccCCCCCceEEEEECCCCceEEEeechh
Q 022818          239 VVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNED  283 (291)
Q Consensus       239 ~l~~~~~~~G~~~~~~~~~~~~~~~~~~~~~DpdG~~iel~~~~~  283 (291)
                      +|    +++|+++...|.+++.+..+++||+||+||.|||.+...
T Consensus       215 ~l----~~~G~~~~~~p~~~~~~~~~~~y~~DPdG~~iE~~~~~~  255 (310)
T 3b59_A          215 RL----KVKGIDIGWGPGRHTAGNNTFSYFVTPGGFVTEYTSELE  255 (310)
T ss_dssp             HH----HHTTCCCSEEEEECSTTCCEEEEEECTTSCEEEEEECCC
T ss_pred             HH----HHcCCceeecCccccCCCcEEEEEECCCCCEEEEEeCcc
Confidence            77    999999988887765545688999999999999998654

>2zyq_A Probable biphenyl-2,3-DIOL 1,2-dioxygenase BPHC; extradiol, DHSA, TB, catechol, cholesterol, steroid, aromatic hydrocarbons catabolism; HET: TAR; 2.00A {Mycobacterium tuberculosis} PDB: 2zi8_A*

Probab=100.00  E-value=1.6e-32  Score=232.60  Aligned_cols=235  Identities=11%  Similarity=0.120  Sum_probs=169.0

Q ss_pred             cceeeEEEEEEeCCHHHHHHHHHhhcCCEEEE-EeecCCCceeEEEEecCCCCcceEEEeeecCCCCcccCCCCceEEEE
Q 022818           20 DKRRFLHAVYRVGDLDRTIKFYTECFGMKLLR-KRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAI   98 (291)
Q Consensus        20 ~~~~i~hv~l~v~d~~~~~~FY~~~lG~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~~~~i~~   98 (291)
                      ++++|+|+.|.|+|++++++||+++|||++.. +.   ++   ..++..++....  +.+...       ...+..|++|
T Consensus         2 ~i~~i~hv~l~v~Dl~~a~~FY~~~lG~~~~~~~~---~~---~~~~~~~~~~~~--l~l~~~-------~~~~~~~~~~   66 (300)
T 2zyq_A            2 SIRSLGYLRIEATDMAAWREYGLKVLGMVEGKGAP---EG---ALYLRMDDFPAR--LVVVPG-------EHDRLLEAGW   66 (300)
T ss_dssp             CCCEEEEEEEEESCHHHHHHHHHHTSCCEECSSCC---SS---CEEEESSSSSCS--EEEEEC-------SSCEEEEEEE
T ss_pred             CcceEEEEEEEeCCHHHHHHHHHHccCCEEeccCC---CC---eEEEEeCCCcEE--EEEecC-------CCCCcceEEE
Confidence            57899999999999999999999999999875 32   11   244555443322  333222       1246789999


Q ss_pred             EeCC---HHHHHHHHHHcCCeeecCCeec---CCCceEEEEEECCCCCEEEEEeC-CCC---------------CCCceE
Q 022818           99 ATED---VYKLVENIRAKGGNVTREPGPL---KGGTTHIAFVKDPDGYIFELIQR-GPT---------------PEPLCQ  156 (291)
Q Consensus        99 ~v~d---~~~~~~~l~~~G~~~~~~~~~~---~~g~~~~~~~~Dp~G~~iel~~~-~~~---------------~~~~~~  156 (291)
                      .|++   +++++++|+++|+++...+...   .++.. .++|+||+||.|||++. ...               +.++.|
T Consensus        67 ~v~~~~dl~~~~~~l~~~G~~~~~~~~~~~~~~~~~~-~~~~~DPdG~~iel~~~~~~~~~~~~~~~~~~~~~~~~~l~h  145 (300)
T 2zyq_A           67 ECANAEGLQEIRNRLDLEGTPYKEATAAELADRRVDE-MIRFADPSGNCLEVFHGTALEHRRVVSPYGHRFVTGEQGMGH  145 (300)
T ss_dssp             ECSSHHHHHHHHHHHHHHTCCCEECCHHHHHHHTCSE-EEEEECTTCCEEEEEECCCCCCSCCCCTTCCCBCCGGGCSCE
T ss_pred             EeCCHHHHHHHHHHHHHcCCeEEeCChhhcccccceE-EEEEECCCCCEEEEEEcCCcCCCCCccCCCcccccCCCccCe
Confidence            9965   8899999999999987665432   23333 48899999999999997 211               246899


Q ss_pred             EEeeeCChhhhHHHHHHhcCCeeeeeeccCC--------c-cceEEEeccccCCceeEEEEeeecCcceeecCcceeEEE
Q 022818          157 VMLRVGDLGRSIKFYEKALGMKLLRTVDKPE--------Y-KYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVA  227 (291)
Q Consensus       157 v~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~--------~-~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~hi~  227 (291)
                      +.|.|+|++++++||+++|||++......+.        + .....++..+..  ...+.+...      +...+..|++
T Consensus       146 v~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~--~~~~~~~~~------~~~~g~~h~a  217 (300)
T 2zyq_A          146 VVLSTRDDAEALHFYRDVLGFRLRDSMRLPPQMVGRPADGPPAWLRFFGCNPR--HHSLAFLPM------PTSSGIVHLM  217 (300)
T ss_dssp             EEEECSCHHHHHHHHHTTTCCEEEEEEEECGGGGTCCTTSCCEEEEEEESSSB--SCSEEEESS------CCSSSEEEEE
T ss_pred             EEEEeCCHHHHHHHHHHhcCCEEeeeecccccccccCCCCCceEEEEEEECCC--ccEEEEecC------CCCCCceEEE
Confidence            9999999999999999999999875432221        1 123344443221  223444321      1235778999


Q ss_pred             EEecchHH---hHHHHHHHHHHhCCeeecCCccCCCCCceEEEEECCCCceEEEeech
Q 022818          228 ISTDDVYK---SAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNE  282 (291)
Q Consensus       228 ~~v~di~~---~~~~l~~~~~~~G~~~~~~~~~~~~~~~~~~~~~DpdG~~iel~~~~  282 (291)
                      |.|+|+++   ++++|    +++|+++..+|...+.++.+++||+|||||+|||++..
T Consensus       218 f~v~d~~~v~~~~~~l----~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iEl~~~~  271 (300)
T 2zyq_A          218 VEVEQADDVGLCLDRA----LRRKVPMSATLGRHVNDLMLSFYMKTPGGFDIEFGCEG  271 (300)
T ss_dssp             EEBSSHHHHHHHHHHH----HHTTCCEEEEEEEESSSCCEEEEEECTTSSEEEEEECC
T ss_pred             EEeCCHHHHHHHHHHH----HHCCCceeecccccCCCCeEEEEEECCCCCEEEEEeCC
Confidence            99998655   46777    99999998887766554468899999999999999764

>1kw3_B 2,3-dihydroxybiphenyl dioxygenase; four TIME repetitions of the beta-alpha-beta-BETA-beta motif oxidoreductase; 1.45A {Pseudomonas SP} SCOP: d.32.1.3 d.32.1.3 PDB: 1dhy_A 1eiq_A 1eir_A* 1eil_A 1kw6_B* 1kw8_B* 1kw9_B* 1kwb_B 1kwc_B*

Probab=100.00  E-value=4.6e-32  Score=228.84  Aligned_cols=233  Identities=13%  Similarity=0.140  Sum_probs=167.3

Q ss_pred             ceeeEEEEEEeCCHHHHHHHHHhhcCCEEEEEeecCCCceeEEEEecCCCCcceEEEeeecCCCCcccCCCCceEEEEEe
Q 022818           21 KRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIAT  100 (291)
Q Consensus        21 ~~~i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~~~~i~~~v  100 (291)
                      +++|+||.|.|+|++++.+||+++|||++..+..  .    ..++..++....+.  +...       ...+..|++|.|
T Consensus         2 i~~i~hv~l~v~Dl~~a~~FY~~~lG~~~~~~~~--~----~~~l~~~~~~~~l~--~~~~-------~~~~~~~~~f~v   66 (292)
T 1kw3_B            2 IERLGYLGFAVKDVPAWDHFLTKSVGLMAAGSAG--D----AALYRADQRAWRIA--VQPG-------ELDDLAYAGLEV   66 (292)
T ss_dssp             CCEEEEEEEEESCHHHHHHHHHHTTCCEEEEEET--T----EEEEESSSBSCSEE--EEEC-------TTCEEEEEEEEC
T ss_pred             ceeEEEEEEEeCCHHHHHHHHHhcCCCEEeecCC--C----eEEEEcCCceEEEE--EccC-------CCCCccEEEEEE
Confidence            7899999999999999999999999999976532  1    23455544332222  2221       123678999999


Q ss_pred             C---CHHHHHHHHHHcCCeeecCCee---cCCCceEEEEEECCCCCEEEEEeCCCC------------------CCCceE
Q 022818          101 E---DVYKLVENIRAKGGNVTREPGP---LKGGTTHIAFVKDPDGYIFELIQRGPT------------------PEPLCQ  156 (291)
Q Consensus       101 ~---d~~~~~~~l~~~G~~~~~~~~~---~~~g~~~~~~~~Dp~G~~iel~~~~~~------------------~~~~~~  156 (291)
                      +   |+++++++|+++|+++...+..   ..++.. .++|+||+||.|||++....                  ..++.|
T Consensus        67 ~~~~dl~~~~~~l~~~G~~~~~~~~~~~~~~~~~~-~~~~~DPdG~~iel~~~~~~~~~~~~~~~~~~~~~~~~~~~l~h  145 (292)
T 1kw3_B           67 DDAAALERMADKLRQAGVAFTRGDEALMQQRKVMG-LLCLQDPFGLPLEIYYGPAEIFHEPFLPSAPVSGFVTGDQGIGH  145 (292)
T ss_dssp             SSHHHHHHHHHHHHHHTCCCEECCHHHHHHHTCSE-EEEEECTTSCEEEEEECCCBCTTSCCCCSSSCCCBCCGGGCSCE
T ss_pred             CCHHHHHHHHHHHHHcCCeEeecCcccccccCceE-EEEEECCCCCEEEEEECccccccCCCCCCCCccccccCCcccce
Confidence            8   8999999999999998776643   123333 48899999999999986521                  135899


Q ss_pred             EEeeeCChhhhHHHHHHhcCCeeeeeeccC--Cc-cceEEEeccccCCceeEEEEeeecCcceeecCcceeEEEEEecch
Q 022818          157 VMLRVGDLGRSIKFYEKALGMKLLRTVDKP--EY-KYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDV  233 (291)
Q Consensus       157 v~l~v~d~~~~~~fy~~~lG~~~~~~~~~~--~~-~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~hi~~~v~di  233 (291)
                      +.|.|+|++++.+||+++|||++......+  ++ .....++..+..  ...+.+...      +...+.+|++|.|+|+
T Consensus       146 v~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~g~~~~~~~~~~~~~--~~~~~~~~~------~~~~~~~hiaf~v~d~  217 (292)
T 1kw3_B          146 FVRCVPDTAKAMAFYTEVLGFVLSDIIDIQMGPETSVPAHFLHCNGR--HHTIALAAF------PIPKRIHHFMLQANTI  217 (292)
T ss_dssp             EEEECSCHHHHHHHHHHTTCCEEEEEEEEEEETTEEEEEEEEESSSB--SCSEEEECC------SCSSSEEEEEEEBSSH
T ss_pred             EEEecCCHHHHHHHHHhccCCEEeeeeecccCCCccceEEEEEECCC--cceEEEecC------CCCCceEEEEEEcCCH
Confidence            999999999999999999999987543321  11 123344443222  223343321      1135789999999986


Q ss_pred             HH---hHHHHHHHHHHhCCeeecCCccCCCCCceEEEEECCCCc-eEEEeech
Q 022818          234 YK---SAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGW-KTVLVDNE  282 (291)
Q Consensus       234 ~~---~~~~l~~~~~~~G~~~~~~~~~~~~~~~~~~~~~DpdG~-~iel~~~~  282 (291)
                      ++   ++++|    + +|+++..+|...+.+..+++||+||||| +|||++..
T Consensus       218 ~~v~~~~~~l----~-~G~~~~~~p~~~~~~~~~~~y~~DPdG~~~iEl~~~~  265 (292)
T 1kw3_B          218 DDVGYAFDRL----D-AAGRITSLLGRHTNDQTLSFYADTPSPMIEVEFGWGP  265 (292)
T ss_dssp             HHHHHHHHHH----H-HTTCBCBCSEEESSSCCEEEEEECSSTTCEEEEEECC
T ss_pred             HHHHHHHHHH----h-CCCceeecCcccCCCCeEEEEEECCCCCeeEEEEECC
Confidence            65   44555    8 9999988887766544577899999999 99999864

>2wl9_A Catechol 2,3-dioxygenase; aromatic hydrocarbons catabolism, iron, oxidoreductase; 1.90A {Rhodococcus SP} PDB: 2wl3_A

Probab=100.00  E-value=3e-32  Score=231.41  Aligned_cols=237  Identities=13%  Similarity=0.161  Sum_probs=168.1

Q ss_pred             CcceeeEEEEEEeCCHHHHHHHHHhhcCCEEEEEeecCCCceeEEEEecCCCCcceEEEeeecCCCCcccCCCCceEEEE
Q 022818           19 KDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAI   98 (291)
Q Consensus        19 ~~~~~i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~~~~i~~   98 (291)
                      +.+++|+|+.|.|+|++++++||+++|||++.....  ++   ..++..++....  +.+....       ..+..|++|
T Consensus         2 m~i~~i~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~~--~~---~~~~~~~~~~~~--l~l~~~~-------~~~~~~~~f   67 (305)
T 2wl9_A            2 AKVTELGYLGLSVSNLDAWRDYAAGIMGMQVVDDGE--DD---RIYLRMDRWHHR--IVLHADG-------SDDLAYIGW   67 (305)
T ss_dssp             CCCCEEEEEEEECSCHHHHHHHHTTTTCCEEECCSC--TT---EEEEECSSBSCS--EEEECSS-------CCEEEEEEE
T ss_pred             CccceeeEEEEEeCCHHHHHHHHHhccCCEEeeccC--CC---eEEEEeCCCeEE--EEEEECC-------CCCeEEEEE
Confidence            347899999999999999999999999999875211  21   244555442222  3333221       246789999


Q ss_pred             EeC---CHHHHHHHHHHcCCeeecCCeec--CCCceEEEEEECCCCCEEEEEeC-CC------------------CCCCc
Q 022818           99 ATE---DVYKLVENIRAKGGNVTREPGPL--KGGTTHIAFVKDPDGYIFELIQR-GP------------------TPEPL  154 (291)
Q Consensus        99 ~v~---d~~~~~~~l~~~G~~~~~~~~~~--~~g~~~~~~~~Dp~G~~iel~~~-~~------------------~~~~~  154 (291)
                      .|+   |+++++++|+++|+++...|...  ..+..+.++|+||+||.|||++. ..                  ...++
T Consensus        68 ~v~~~~dl~~~~~~l~~~G~~~~~~p~~~~~~~~~~~~~~~~DPdG~~iel~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  147 (305)
T 2wl9_A           68 RVAGPVELDELAEQLKNAGIPFEVASDADAAERRVLGLVKLHDPGGNPTEIFYGPQVDTSSPFHPGRPMFGKFVTEGQGL  147 (305)
T ss_dssp             ECSSHHHHHHHHHHHHHTTCCCEECCHHHHHHTTEEEEEEEECTTCCEEEEEEEECBCTTSCCCCSSCCSSCBCCTTTCS
T ss_pred             EECCHHHHHHHHHHHHHCCCceEeCCcccccccCcEEEEEEECCCCCEEEEEECCCccCCCCcCCCCCcccceecCCcee
Confidence            997   69999999999999987766543  22334458899999999999876 21                  12378


Q ss_pred             eEEEeeeCChhhhHHHHHHhcCCeeeeeeccC--Cc-cceEEEeccccCCceeEEEEeeecCcceeecCcceeEEEEEec
Q 022818          155 CQVMLRVGDLGRSIKFYEKALGMKLLRTVDKP--EY-KYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTD  231 (291)
Q Consensus       155 ~~v~l~v~d~~~~~~fy~~~lG~~~~~~~~~~--~~-~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~hi~~~v~  231 (291)
                      .|+.|.|+|++++.+|| ++|||++......+  ++ .....++..+..  ...+.+...      ...++..|++|.|+
T Consensus       148 ~hv~l~v~D~~~s~~FY-~vLG~~~~~~~~~~~~~g~~~~~~~~~~~~~--~~~~~~~~~------~~~~~~~hiaf~v~  218 (305)
T 2wl9_A          148 GHIIIREDDVEEATRFY-RLLGLEGAVEYKFALPNGAVGTPVFMHCNDR--HHSLAFGVG------PMDKRINHLMIEYT  218 (305)
T ss_dssp             CEEEECCSCHHHHHHHH-HHHTCEEEECBCEECTTSCEECCEEEESSSS--SCSEEECCS------CCSSSEEEEEEEES
T ss_pred             eeEEEECCCHHHHHHHH-HHcCCeeeeeEecccCCCccceEEEEEcCCC--ceEEEEecC------CCCCCceEEEEEcC
Confidence            99999999999999999 99999986542211  11 123334443222  222333211      12357899999999


Q ss_pred             c---hHHhHHHHHHHHHHhCCeeecCCccCCCCCceEEEEECCCCceEEEeech
Q 022818          232 D---VYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNE  282 (291)
Q Consensus       232 d---i~~~~~~l~~~~~~~G~~~~~~~~~~~~~~~~~~~~~DpdG~~iel~~~~  282 (291)
                      |   +++++++|    +++|+++..+|...+.++.+++||+|||||+|||+...
T Consensus       219 d~~~v~~~~~~l----~~~G~~~~~~p~~~~~~~~~~~y~~DPdG~~iEl~~~~  268 (305)
T 2wl9_A          219 HLDDLGYAHDLV----RQQKIDVTLQIGKHSNDEALTFYCANPSGWLWEPGWGS  268 (305)
T ss_dssp             SHHHHHHHHHHH----HHTTCCEEEEEEECTTTCCEEEEEECTTSSEEEEEECC
T ss_pred             CHHHHHHHHHHH----HHcCCCccccCcccCCCCcEEEEEECCCCCEEEEEeCC
Confidence            8   44556667    99999998887766654457899999999999999864

>1lgt_A Biphenyl-2,3-DIOL 1,2-dioxygenase; extradiol dioxygenase, 2,3-dihydroxybiphenyl, non-heme iron, anaerobic, PCB biodegradation; HET: BP3; 1.70A {Burkholderia xenovorans} SCOP: d.32.1.3 d.32.1.3 PDB: 1kmy_A* 1knd_A 1knf_A 1han_A* 1lkd_A*

Probab=100.00  E-value=9.6e-32  Score=227.43  Aligned_cols=236  Identities=16%  Similarity=0.172  Sum_probs=171.1

Q ss_pred             ceeeEEEEEEeCCHHHHHHHHHhhcCCEEEEEeecCCCceeEEEEecCCCCcceEEEeeecCCCCcccCCCCceEEEEEe
Q 022818           21 KRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIAT  100 (291)
Q Consensus        21 ~~~i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~~~~i~~~v  100 (291)
                      +++|+||.|.|+|++++.+||+++|||++..+..  +    ..++..++....+.+  ...       ...+..|++|.|
T Consensus         2 i~~i~hv~l~v~Dl~~s~~FY~~~LG~~~~~~~~--~----~~~~~~~~~~~~l~~--~~~-------~~~~~~~~~f~v   66 (297)
T 1lgt_A            2 IRSLGYMGFAVSDVAAWRSFLTQKLGLMEAGTTD--N----GDLFRIDSRAWRIAV--QQG-------EVDDLAFAGYEV   66 (297)
T ss_dssp             EEEEEEEEEEESCHHHHHHHHHHTTCCEEEEEET--T----EEEEESSSBSCSEEE--EEC-------TTCEEEEEEEEE
T ss_pred             ceEEEEEEEEcCCHHHHHHHHHHccCCEEeecCC--C----eEEEEeCCCcEEEEE--ecC-------CCCCccEEEEEe
Confidence            6899999999999999999999999999987542  1    245555443333332  221       123678999999


Q ss_pred             C---CHHHHHHHHHHcCCeeecCCeec---CCCceEEEEEECCCCCEEEEEeCCCC------------------CCCceE
Q 022818          101 E---DVYKLVENIRAKGGNVTREPGPL---KGGTTHIAFVKDPDGYIFELIQRGPT------------------PEPLCQ  156 (291)
Q Consensus       101 ~---d~~~~~~~l~~~G~~~~~~~~~~---~~g~~~~~~~~Dp~G~~iel~~~~~~------------------~~~~~~  156 (291)
                      +   |+++++++|+++|+++...+...   .++. ++++|+||+||.|||++....                  +.++.|
T Consensus        67 ~~~~dl~~~~~~l~~~G~~~~~~~~~~~~~~~~~-~~~~~~DPdG~~iel~~~~~~~~~~~~~~~~~~~~~~~~~~~l~h  145 (297)
T 1lgt_A           67 ADAAGLAQMADKLKQAGIAVTTGDASLARRRGVT-GLITFADPFGLPLEIYYGASEVFEKPFLPGAAVSGFLTGEQGLGH  145 (297)
T ss_dssp             SSHHHHHHHHHHHHHTTCCCEECCHHHHHHHTCS-EEEEEECTTSCEEEEEECCCBCTTSCCCCSSSCSCBCCGGGCSCE
T ss_pred             CCHHHHHHHHHHHHHCCCeEEeCCccccccCCce-eEEEEECCCCCEEEEEECccccccCCccCCCcccccccCccccce
Confidence            8   99999999999999987665431   2333 358999999999999986521                  146899


Q ss_pred             EEeeeCChhhhHHHHHHhcCCeeeeeecc---CCccceEEEeccccCCceeEEEEeeecCcceeecCcceeEEEEEecch
Q 022818          157 VMLRVGDLGRSIKFYEKALGMKLLRTVDK---PEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDV  233 (291)
Q Consensus       157 v~l~v~d~~~~~~fy~~~lG~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~hi~~~v~di  233 (291)
                      +.|.|+|++++.+||+++|||++......   ++......++..+..  ...+.+...      +...+..|++|.|+|+
T Consensus       146 v~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~l~l~~~------~~~~~~~hiaf~v~d~  217 (297)
T 1lgt_A          146 FVRCVPDSDKALAFYTDVLGFQLSDVIDMKMGPDVTVPAYFLHCNER--HHTLAIAAF------PLPKRIHHFMLEVASL  217 (297)
T ss_dssp             EEEECSCHHHHHHHHHHTTCCEEEEEEEEEEETTEEEEEEEEESSSB--SCSEEEECC------CCSSSEEEEEEEBSCH
T ss_pred             EEEecCCHHHHHHHHHHhcCCeeeeEEeccCCCCccceEEEEEeCCC--cceEEEEcC------CCCCCceEEEEeCCCH
Confidence            99999999999999999999998754321   111123344443221  233444321      1235788999999997


Q ss_pred             HHhHHHHHHHHHHhCCeeecCCccCCCCCceEEEEECCCCceEEEeech
Q 022818          234 YKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNE  282 (291)
Q Consensus       234 ~~~~~~l~~~~~~~G~~~~~~~~~~~~~~~~~~~~~DpdG~~iel~~~~  282 (291)
                      +++.+.. ++ +++|+++..+|...+.+..+++||+|||||+|||++..
T Consensus       218 ~~~~~~~-~~-~~~G~~~~~~p~~~~~g~~~~~~~~DPdG~~iel~~~~  264 (297)
T 1lgt_A          218 DDVGFAF-DR-VDADGLITSTLGRHTNDHMVSFYASTPSGVEVEYGWSA  264 (297)
T ss_dssp             HHHHHHH-HH-HHTTTCEEEEEEEESSSCCEEEEEECTTSCEEEEEECC
T ss_pred             HHHHHHH-HH-HhCCCcccccCcccCCCCcEEEEEECCCCcEEEEecCC
Confidence            7766554 55 78999998888777654456799999999999999865

>2ehz_A 1,2-dihydroxynaphthalene dioxygenase; extradiol dioxygenase, protein substrate complex, oxidoreduc; 1.35A {Pseudomonas SP} PDB: 2ei0_A* 2ei1_A* 2ei3_A* 2ei2_A

Probab=100.00  E-value=8.6e-32  Score=228.25  Aligned_cols=237  Identities=13%  Similarity=0.098  Sum_probs=166.5

Q ss_pred             CcceeeEEEEEEeCCHHHHHHHHHhhcCCEEEEEeecCCCceeEEEEecCCCCcceEEEeeecCCCCcccCCCCceEEEE
Q 022818           19 KDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAI   98 (291)
Q Consensus        19 ~~~~~i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~~~~i~~   98 (291)
                      +++++|+|+.|.|+|++++.+||+++|||++..+..  ++   ..++..+.....  +.+...       ...+..|++|
T Consensus         5 m~i~~i~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~~--~~---~~~~~~~~~~~~--l~l~~~-------~~~~~~~~~~   70 (302)
T 2ehz_A            5 AAVIELGYMGISVKDPDAWKSFATDMLGLQVLDEGE--KD---RFYLRMDYWHHR--IVVHHN-------GQDDLEYLGW   70 (302)
T ss_dssp             CCEEEEEEEEEECSCHHHHHHHHHHTTCCEEECCSC--SS---EEEEESSSBSCS--EEEESS-------CCSEEEEEEE
T ss_pred             ccccEeeEEEEEeCCHHHHHHHHHhcCCCEEEeccC--Cc---ceEEEeCCCceE--EEEecC-------CCCCeeEEEE
Confidence            468999999999999999999999999999975421  11   234444322222  223221       1236789999


Q ss_pred             EeC---CHHHHHHHHHHcCCeeecCCeecC--CCceEEEEEECCCCCEEEEEeCCC----C---------------CCCc
Q 022818           99 ATE---DVYKLVENIRAKGGNVTREPGPLK--GGTTHIAFVKDPDGYIFELIQRGP----T---------------PEPL  154 (291)
Q Consensus        99 ~v~---d~~~~~~~l~~~G~~~~~~~~~~~--~g~~~~~~~~Dp~G~~iel~~~~~----~---------------~~~~  154 (291)
                      .|.   |+++++++|+++|+++...|...+  .+..+.++|+||+||.|||++...    .               +.++
T Consensus        71 ~v~~~~dl~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  150 (302)
T 2ehz_A           71 RVAGKPEFEALGQKLIDAGYKIRICDKVEAQERMVLGLMKTEDPGGNPTEIFWGPRIDMSNPFHPGRPLHGKFVTGDQGL  150 (302)
T ss_dssp             EESSHHHHHHHHHHHHHTTCCCEECCHHHHHHHTEEEEEEEECTTSCEEEEEEEECBCTTSCCCCSSCCSSCBCCGGGCS
T ss_pred             EECCHHHHHHHHHHHHHCCCcEEECCccccccccceEEEEEECCCCCEEEEEECCCccCCCCccCCCCcccceecCCCcc
Confidence            994   699999999999999877655432  133445899999999999987521    0               1278


Q ss_pred             eEEEeeeCChhhhHHHHHHhcCCeeeeeeccC--Cc-cceEEEeccccCCceeEEEEeeecCcceeecCcceeEEEEEec
Q 022818          155 CQVMLRVGDLGRSIKFYEKALGMKLLRTVDKP--EY-KYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTD  231 (291)
Q Consensus       155 ~~v~l~v~d~~~~~~fy~~~lG~~~~~~~~~~--~~-~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~hi~~~v~  231 (291)
                      .|+.|.|+|++++.+|| ++|||++......+  ++ .....++..+..  ...+.+..  .    +..++..|++|.|+
T Consensus       151 ~hv~l~v~D~~~a~~FY-~~lG~~~~~~~~~~~~~g~~~~~~~~~~~~~--~~~~~~~~--~----~~~~~~~hiaf~v~  221 (302)
T 2ehz_A          151 GHCIVRQTDVAEAHKFY-SLLGFRGDVEYRIPLPNGMTAELSFMHCNAR--DHSIAFGA--M----PAAKRLNHLMLEYT  221 (302)
T ss_dssp             CEEEECCSCHHHHHHHH-HHTTCBCCEEEEEECTTSCEEEEEEEBSSSB--SCSEEECS--C----CCSSSEEEEEEEES
T ss_pred             ceEEEEcCCHHHHHHHH-HhcCCeeeeEEeccCCCCcceEEEEEEeCCC--CcEEEEec--C----CCCCceeEEEEEcC
Confidence            99999999999999999 99999976543211  11 123344443222  22233321  1    12357789999999


Q ss_pred             chHH---hHHHHHHHHHHhCCeeecCCccCCCCCceEEEEECCCCceEEEeech
Q 022818          232 DVYK---SAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNE  282 (291)
Q Consensus       232 di~~---~~~~l~~~~~~~G~~~~~~~~~~~~~~~~~~~~~DpdG~~iel~~~~  282 (291)
                      |+++   ++++|    +++|+++..+|...+.++.+++||+|||||+|||+...
T Consensus       222 d~~~v~~~~~~l----~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iEl~~~~  271 (302)
T 2ehz_A          222 HMEDLGYTHQQF----VKNEIDIALQLGIHANDKALTFYGATPSGWLIEPGWRG  271 (302)
T ss_dssp             SHHHHHHHHHHH----HHTTCCEEEEEEECTTTCCEEEEEECTTSSEEEEEECC
T ss_pred             CHHHHHHHHHHH----HHCCCcEEeCCcccCCCCceEEEEECCCCcEEEEEECc
Confidence            8665   44566    99999998888776654457899999999999998763

>2r5v_A PCZA361.1; dioxygenase, non-heme iron, vancomycin, oxidoreductase; HET: HHH; 2.30A {Amycolatopsis orientalis}

Probab=99.97  E-value=1.7e-29  Score=218.94  Aligned_cols=250  Identities=19%  Similarity=0.244  Sum_probs=177.8

Q ss_pred             cceeeEEEEEEeCCHHHHHHHHHhhcCCEEEEEeecCCCceeEEEEecCCCCcceEEEeeecCCCCc------ccCCCCc
Q 022818           20 DKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTS------YDIGTGF   93 (291)
Q Consensus        20 ~~~~i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~------~~~g~~~   93 (291)
                      .+++|+||.|.|+|++++.+||+++|||+++.+....++  ..+.+..+  ...+.  +..+.....      ...+.++
T Consensus         2 ~i~~l~hv~~~v~D~~~a~~fy~~~LGf~~~~~~~~~~g--~~~~~~~g--~~~l~--l~~~~~~~~~~~~~~~~~g~g~   75 (357)
T 2r5v_A            2 QNFEIDYVEMYVENLEVAAFSWVDKYAFAVAGTSRSADH--RSIALRQG--QVTLV--LTEPTSDRHPAAAYLQTHGDGV   75 (357)
T ss_dssp             CCCEEEEEEEECSCHHHHHHHHHHHHCCEEEEEEEETTE--EEEEEEET--TEEEE--EEEESSTTSHHHHHHHHHSSEE
T ss_pred             CCceEEEEEEEECCHHHHHHHHHHcCCCeEEEEEcCCCc--eEEEEEeC--CEEEE--EeCCCCCCCHHHHHHHhcCCeE
Confidence            478999999999999999999999999999877654333  23334433  23333  333211111      1146689


Q ss_pred             eEEEEEeCCHHHHHHHHHHcCCeeecCCeecCCCceEEEEEECCCCCEEEEEeCCCC-----------------------
Q 022818           94 GHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRGPT-----------------------  150 (291)
Q Consensus        94 ~~i~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~Dp~G~~iel~~~~~~-----------------------  150 (291)
                      .|++|.|+|+++++++++++|+++...|.....|....+.+++|+|..++|++....                       
T Consensus        76 ~~iaf~V~D~~~~~~~l~~~G~~~~~~p~~~~~g~~~~~~~~~p~g~~~~lv~~~~~~~~f~p~~~~~~~~~~~~~~~~~  155 (357)
T 2r5v_A           76 ADIAMATSDVAAAYEAAVRAGAEAVRAPGQHSEAAVTTATIGGFGDVVHTLIQRDGTSAELPPGFTGSMDVTNHGKGDVD  155 (357)
T ss_dssp             EEEEEEESCHHHHHHHHHHTTCCEEEEEECCC-CCCCEEEEECSTTCEEEEEECCSSSCCCCTTCEECSCCCCTTCTTCC
T ss_pred             EEEEEEECCHHHHHHHHHHcCCeEeECcEecCCCeEEEEEEeccCCeEEEEEecccCCCCCCCCCcccCcccccCCCCCC
Confidence            999999999999999999999998877654333544457899999999999886310                       


Q ss_pred             CCCceEEEeeeC--ChhhhHHHHHHhcCCeeeeeec--cCCccceEEEeccccCCceeEEEEeeecCc---ce------e
Q 022818          151 PEPLCQVMLRVG--DLGRSIKFYEKALGMKLLRTVD--KPEYKYTLAMLGYAEEDQTTVLELTYNYGV---TE------Y  217 (291)
Q Consensus       151 ~~~~~~v~l~v~--d~~~~~~fy~~~lG~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~---~~------~  217 (291)
                      ..+++|+++.|+  |++++.+||+++|||++....+  .+.......++..+.+  ...|++......   .+      .
T Consensus       156 ~~~l~Hv~l~V~~~D~~~~~~FY~~vLGf~~~~~~~~~~~~~~~~~~~l~~~~g--~~~l~l~~~~~~~~~~~~~~~~~~  233 (357)
T 2r5v_A          156 LLGIDHFAICLNAGDLGPTVEYYERALGFRQIFDEHIVVGAQAMNSTVVQSASG--AVTLTLIEPDRNADPGQIDEFLKD  233 (357)
T ss_dssp             CCEEEEEEEECCTTCHHHHHHHHHHHHCCEEEEEEEEEETTEEEEEEEEECTTS--CCEEEEEEECTTSBCCHHHHHHHH
T ss_pred             cceEeEEEEEEchhhHHHHHHHHHHhcCCcEEEEEeeccCCcceEEEEEECCCC--CEEEEEeeecCCCCCchhHHHHHh
Confidence            124899999999  9999999999999999875432  2222234445553332  455666554321   10      0


Q ss_pred             ecCcceeEEEEEecchHHhHHHHHHHHHHhCCeeecCCccC---CC-----CC--------ceEEEEECCCCceEEEeec
Q 022818          218 TKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSI---PG-----LN--------TKITSFVDPDGWKTVLVDN  281 (291)
Q Consensus       218 ~~~~~~~hi~~~v~di~~~~~~l~~~~~~~G~~~~~~~~~~---~~-----~~--------~~~~~~~DpdG~~iel~~~  281 (291)
                      ..+++++||||.|+|+++++++|    +++|++++..|..-   .+     .+        .+++|++||||++|||.+.
T Consensus       234 ~~~~g~~Hiaf~v~Di~~~~~~L----~~~Gv~~~~~p~~yy~~~~~r~~~~~~~~~~~~~~~~l~~~Dp~G~llqi~t~  309 (357)
T 2r5v_A          234 HQGAGVQHIAFNSNDAVRAVKAL----SERGVEFLKTPGAYYDLLGERITLQTHSLDDLRATNVLADEDHGGQLFQIFTA  309 (357)
T ss_dssp             HTSSEEEEEEEECSCHHHHHHHH----HHTTCCBCCCCHHHHHTTTTTCCCSSSCHHHHHHHTCEEEEETTEEEEEEEBC
T ss_pred             cCCCCccEEEEEcCCHHHHHHHH----HHcCCCcCCCchhHHHHHHHhhccchhhHHHHHHcCeEEecCCCceEEEEEcc
Confidence            13568999999999999999999    99999988776320   00     00        1379999999999999874

>1t47_A 4-hydroxyphenylpyruvate dioxygenase; triketone inhibitor, iron, oxidoreductase; HET: NTD; 2.50A {Streptomyces avermitilis} SCOP: d.32.1.3 d.32.1.3

Probab=99.97  E-value=4.6e-28  Score=211.18  Aligned_cols=253  Identities=18%  Similarity=0.240  Sum_probs=175.1

Q ss_pred             CCcceeeEEEEEEeCCHHHHHHHHHhhcCCEEEEEeecCCC--ceeEEEEecCCCCcceEEEeeecCCCCc--------c
Q 022818           18 KKDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEE--KYSNAFLGFGPEQSHFVVELTYNYGVTS--------Y   87 (291)
Q Consensus        18 ~~~~~~i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~~~~~~~~~~--------~   87 (291)
                      .+.+++|+||.|.|+|++++++||+++|||+++.+.....+  ......+..+  ..  .+.+.....+..        +
T Consensus        17 ~~~i~~i~hV~i~V~D~~~a~~FY~~~LGf~~~~~~~~~~~~~~~~~~~~~~g--~~--~l~l~~~~~~~~~~~~~~~~~   92 (381)
T 1t47_A           17 PFPVKGMDAVVFAVGNAKQAAHYYSTAFGMQLVAYSGPENGSRETASYVLTNG--SA--RFVLTSVIKPATPWGHFLADH   92 (381)
T ss_dssp             CSCCCEEEEEEEECSCHHHHHHHHHHTSCCEEEEEESGGGTCCSEEEEEEEET--TE--EEEEEEESSCCSHHHHHHHHH
T ss_pred             CCcCceEEEEEEEECCHHHHHHHHHHcCCCEEEEEEcCCCCCceEEEEEEecC--CE--EEEEecCCCCCCcchhHHHHH
Confidence            46689999999999999999999999999999876432212  2234444433  22  344443211111        1


Q ss_pred             --cCCCCceEEEEEeCCHHHHHHHHHHcCCeeecCCeecC--CCceEEEEEECCCCCEEEEEeCC-------C------C
Q 022818           88 --DIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLK--GGTTHIAFVKDPDGYIFELIQRG-------P------T  150 (291)
Q Consensus        88 --~~g~~~~~i~~~v~d~~~~~~~l~~~G~~~~~~~~~~~--~g~~~~~~~~Dp~G~~iel~~~~-------~------~  150 (291)
                        .+|.++.|++|+|+|+++++++|+++|+++..+|....  .|...++.+++|+|+.++|++..       +      .
T Consensus        93 ~~~~g~gv~~iaf~V~D~~~~~~~l~~~G~~~~~~p~~~~~~~g~~~~~~~~~pgg~~~~lv~~~~~~~~f~p~~~~~~~  172 (381)
T 1t47_A           93 VAEHGDGVVDLAIEVPDARAAHAYAIEHGARSVAEPYELKDEHGTVVLAAIATYGKTRHTLVDRTGYDGPYLPGYVAAAP  172 (381)
T ss_dssp             HHHHCSEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEEEETTEEEEEEEEECSTTCEEEEEEEEEECSSSSTTCEECCC
T ss_pred             HHhcCCceEEEEEEECCHHHHHHHHHHcCCEEeeccccccCCCCeEEEEEEecCCCcEEEEEecCCCCCCCCCCCccccc
Confidence              13678999999999999999999999999887776432  23334578899999999998752       0      0


Q ss_pred             ---------CCCceEEEeeeC--ChhhhHHHHHHhcCCeeeeeec-----cCCccceEEEeccccCCceeEEEEeeec--
Q 022818          151 ---------PEPLCQVMLRVG--DLGRSIKFYEKALGMKLLRTVD-----KPEYKYTLAMLGYAEEDQTTVLELTYNY--  212 (291)
Q Consensus       151 ---------~~~~~~v~l~v~--d~~~~~~fy~~~lG~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~l~l~~~~--  212 (291)
                               ..+++|+++.|+  |++++.+||+++|||++....+     .+.......++..+.+  ...+++..+.  
T Consensus       173 ~~~~~~~~~~~~idHv~l~V~~~dl~~a~~FY~~vLGf~~~~~~~~~~i~~~~~~~~~~~l~~~~g--~v~i~l~~~~~~  250 (381)
T 1t47_A          173 IVEPPAHRTFQAIDHCVGNVELGRMNEWVGFYNKVMGFTNMKEFVGDDIATEYSALMSKVVADGTL--KVKFPINEPALA  250 (381)
T ss_dssp             SSCCCSSCSCCEEEEEEEECCTTCHHHHHHHHHHHHCCEECSCCBCHHHHTTTTSEEEEEEECTTS--CSEEEEEEECCS
T ss_pred             cccCCCCCCceEEeEEEEeeccccHHHHHHHHHHhhCCEEeeecCcceeccCCccEEEEEEECCCC--cEEEEEecCCcC
Confidence                     135899999999  9999999999999999876642     2222334444443322  3456665443  


Q ss_pred             Ccce-------eecCcceeEEEEEecchHHhHHHHHHHHHHhCCeeecCCccCCC--------CC--------ceEEEEE
Q 022818          213 GVTE-------YTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPG--------LN--------TKITSFV  269 (291)
Q Consensus       213 ~~~~-------~~~~~~~~hi~~~v~di~~~~~~l~~~~~~~G~~~~~~~~~~~~--------~~--------~~~~~~~  269 (291)
                      ....       ...+.|++||||.|+|+.+++++|    +++|+++...|..--.        .+        ..+.+-+
T Consensus       251 ~~~s~~~~~l~~~~g~Gv~HiAf~vdDi~~~~~~L----~~~Gv~~~~~p~~Yy~~l~~R~~~~~~~~~~l~~~~il~d~  326 (381)
T 1t47_A          251 KKKSQIDEYLEFYGGAGVQHIALNTGDIVETVRTM----RAAGVQFLDTPDSYYDTLGEWVGDTRVPVDTLRELKILADR  326 (381)
T ss_dssp             SSCCHHHHHHHHHTSCEEEEEEEECSCHHHHHHHH----HHTTCCBCCCCGGGTTSHHHHHCCCSSCHHHHHHHTCEEEE
T ss_pred             CCccHHHHHHHHhCCCCcceEEEecCCHHHHHHHH----HHcCCccCCCCccHHHHHHHhccccchhHHHHHHhCeEEee
Confidence            1111       124678999999999999999999    9999998877643100        00        1245667


Q ss_pred             CCCCceEEEee
Q 022818          270 DPDGWKTVLVD  280 (291)
Q Consensus       270 DpdG~~iel~~  280 (291)
                      ||+|.++.|..
T Consensus       327 d~~g~llqift  337 (381)
T 1t47_A          327 DEDGYLLQIFT  337 (381)
T ss_dssp             CSSCEEEEEEB
T ss_pred             CCCCeEEEEec
Confidence            77776666654

>3isq_A 4-hydroxyphenylpyruvate dioxygenase; tyrosine metabolism, DIS mutation, iron, mental retardation, metal-binding, oxidored phenylalanine catabolism; 1.75A {Homo sapiens} PDB: 1sqi_A*

Probab=99.95  E-value=4e-26  Score=197.39  Aligned_cols=228  Identities=18%  Similarity=0.275  Sum_probs=167.2

Q ss_pred             CCcceeeEEEEEEeCCHHHHHHHHHhhcCCEEEEEeecCCCc--eeEEEEecCCCCcceEEEeeecCCCC--c---c--c
Q 022818           18 KKDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEK--YSNAFLGFGPEQSHFVVELTYNYGVT--S---Y--D   88 (291)
Q Consensus        18 ~~~~~~i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~~~~~~~~--~---~--~   88 (291)
                      ...+++|+||.|.|+|++++.+||++.|||+.......+.+.  ...+.+..+  ...  +.+..+..+.  +   +  .
T Consensus         6 ~~~i~~i~Hv~i~V~d~~~a~~fY~~~LGf~~v~~~~~e~g~r~~~~~~l~~G--~i~--~~L~~p~~p~s~~~a~fl~~   81 (393)
T 3isq_A            6 RGRFLHFHSVTFWVGNAKQAASFYCSKMGFEPLAYRGLETGSREVVSHVIKQG--KIV--FVLSSALNPWNKEMGDHLVK   81 (393)
T ss_dssp             SCEEEEEEEEEEECSCHHHHHHHHHHHHCCEEEEEESGGGTCCSEEEEEEEET--TEE--EEEEEESSTTCHHHHHHHHH
T ss_pred             CCCCceEeEEEEEECCHHHHHHHHHHhcCCEEEEEEcCCCCcEEEEEEEEecC--CEE--EEEecCCCCCchHHHHHHHh
Confidence            345899999999999999999999999999998865543221  223445443  233  3333321111  1   1  2


Q ss_pred             CCCCceEEEEEeCCHHHHHHHHHHcCCeeecCCeecCC--CceEEEEEECCCCCEEEEEeCCC-----------C-----
Q 022818           89 IGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKG--GTTHIAFVKDPDGYIFELIQRGP-----------T-----  150 (291)
Q Consensus        89 ~g~~~~~i~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~--g~~~~~~~~Dp~G~~iel~~~~~-----------~-----  150 (291)
                      +|.+++|+||+|+|+++++++++++|++++.+|.....  |...+..+++|.|..+.|++...           .     
T Consensus        82 hG~Gv~~iAf~VdDvdaa~~ra~a~Ga~~v~eP~~~~~~~G~v~~a~I~~~Gd~~h~lVdr~~y~~~flpg~~~~~~~~~  161 (393)
T 3isq_A           82 HGDGVKDIAFEVEDCDYIVQKARERGAKIMREPWVEQDKFGKVKFAVLQTYGDTTHTLVEKMNYIGQFLPGYEAPAFMDP  161 (393)
T ss_dssp             HCSEEEEEEEEEECHHHHHHHHHHHTCCEEEEEEEEEETTEEEEEEEEECSTTCEEEEEEEESCCSSSCTTCBSCSCCCT
T ss_pred             cCCcEEEEEEEeCCHHHHHHHHHHCCCeEecCccccccCCceeEEEEEEeCCCcEEEEeccccCcCCCCCCccccccccc
Confidence            57789999999999999999999999999988876543  44456778999999999988420           0     


Q ss_pred             -----C----CCceEEEeeeCC--hhhhHHHHHHhcCCeeeeeec-----cCCccceEEEeccccCCceeEEEEeeecC-
Q 022818          151 -----P----EPLCQVMLRVGD--LGRSIKFYEKALGMKLLRTVD-----KPEYKYTLAMLGYAEEDQTTVLELTYNYG-  213 (291)
Q Consensus       151 -----~----~~~~~v~l~v~d--~~~~~~fy~~~lG~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~l~l~~~~~-  213 (291)
                           +    .+|+|+++.|.|  ++++++||+++|||++.+..+     .+..+.+..++..++  ....|+|..+.+ 
T Consensus       162 ~~~~~~~~~l~~IDHv~i~V~~~~l~~a~~fY~~~lGf~~~~~~d~~~i~~~~~gl~s~~~~~~~--g~v~i~L~ep~~~  239 (393)
T 3isq_A          162 LLPKLPKCSLEMIDHIVGNQPDQEMVSASEWYLKNLQFHRFWSVDDTQVHTEYSSLRSIVVANYE--ESIKMPINEPAPG  239 (393)
T ss_dssp             TGGGSCCCCEEEEEEEEEECCTTCHHHHHHHHHHHHCCEEEEEECTTTSBCSSCEEEEEEEECTT--SSCEEEEEEEECC
T ss_pred             cccCCCCCCeeEEeEEEEecCccHHHHHHHHHHHHhCCEEeccccccccccCCCcEEEEEEECCC--CCEEEEEecCCCC
Confidence                 0    248999999998  999999999999999877643     122334555555333  356677765543 


Q ss_pred             -cce-------eecCcceeEEEEEecchHHhHHHHHHHHHHhCCeeecCC
Q 022818          214 -VTE-------YTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQP  255 (291)
Q Consensus       214 -~~~-------~~~~~~~~hi~~~v~di~~~~~~l~~~~~~~G~~~~~~~  255 (291)
                       ..+       ...|+|++||||.|+||.+++++|    +++|++++..|
T Consensus       240 ~~~s~I~~fL~~~~G~Gi~HiA~~~dDi~~~~~~l----~~~Gv~~l~~P  285 (393)
T 3isq_A          240 KKKSQIQEYVDYNGGAGVQHIALKTEDIITAIRHL----RERGLEFLSVP  285 (393)
T ss_dssp             SBCCHHHHHHHHHTSSEEEEEEEEESCHHHHHHHH----HHTTCCBCCCC
T ss_pred             CCCCHHHHHHHHcCCCCcceEEEEcCCHHHHHHHH----HHcCCccCCCC
Confidence             111       114789999999999999999999    99999999876

>1sqd_A 4-hydroxyphenylpyruvate dioxygenase; oxidoreductase; 1.80A {Arabidopsis thaliana} SCOP: d.32.1.3 d.32.1.3 PDB: 1tfz_A* 1tg5_A* 1sp9_A

Probab=99.95  E-value=9.6e-26  Score=198.14  Aligned_cols=230  Identities=18%  Similarity=0.243  Sum_probs=157.5

Q ss_pred             CcceeeEEEEEEeCCHHHHHHHHHhhcCCEEEEEeecCCC--ceeEEEEecCCCCcceEEEeeecCCCC-----------
Q 022818           19 KDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEE--KYSNAFLGFGPEQSHFVVELTYNYGVT-----------   85 (291)
Q Consensus        19 ~~~~~i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~~~~~~~~~-----------   85 (291)
                      +.+++|+||.|.|+|++++++||++.|||+++.+...+.+  .+..++++.+  ...+.+  ..+..+.           
T Consensus        21 ~~i~~i~HV~i~V~Dle~a~~FY~~~LGf~~v~~~~~~~g~~~~~~~~l~~g--~~~l~L--~~~~~~~~~~~~~~~~~~   96 (424)
T 1sqd_A           21 FKVKRFHHIEFWCGDATNVARRFSWGLGMRFSAKSDLSTGNMVHASYLLTSG--DLRFLF--TAPYSPSLSAGEIKPTTT   96 (424)
T ss_dssp             SCEEEEEEEEEECSCHHHHHHHHHHHHTCEEEEEESGGGTCSSEEEEEEEET--TEEEEE--EEECCGGGTTTCCGGGCC
T ss_pred             ccCCeEEEEEEEECCHHHHHHHHHHcCCCEEEEEEcCCCCceeEEEEEEcCC--CEEEEE--ecCCCCcccccccccccc
Confidence            4578999999999999999999999999999877543322  2344445433  233333  3321110           


Q ss_pred             --------c------ccCCCCceEEEEEeCCHHHHHHHHHHcCCeeecCCeecCCCceEEEEEECCCCCEEEEEeCCCC-
Q 022818           86 --------S------YDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRGPT-  150 (291)
Q Consensus        86 --------~------~~~g~~~~~i~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~Dp~G~~iel~~~~~~-  150 (291)
                              .      ..++.++.|++|.|+|+++++++++++|+++..+|....++ .....+++|.|..++|++.... 
T Consensus        97 ~p~~~~~~~~~~~~~~~~g~gv~~iAf~VdDvdaa~~~l~a~Ga~~~~~P~~~~~~-~~~~~i~~~Gg~~~~lvd~~g~~  175 (424)
T 1sqd_A           97 ASIPSFDHGSCRSFFSSHGLGVRAVAIEVEDAESAFSISVANGAIPSSPPIVLNEA-VTIAEVKLYGDVVLRYVSYKAED  175 (424)
T ss_dssp             CSSTTCCHHHHHHHHHHHCSEEEEEEEEESCHHHHHHHHHHTTCCEEEEEEEETTT-EEEEEEEEETTEEEEEEEECCC-
T ss_pred             cccccccchHHHHHHHhcCCeEEEEEEEeCCHHHHHHHHHHcCCEEeecCcCCCCc-eEEEEEEcCCCcEEEEEecCCCC
Confidence                    0      02456899999999999999999999999988877655332 3335556666666666653211 


Q ss_pred             ------------------------CCCceEEEeeeCChhhhHHHHHHhcCCeeeeeeccCC-----ccceEEEeccccCC
Q 022818          151 ------------------------PEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPE-----YKYTLAMLGYAEED  201 (291)
Q Consensus       151 ------------------------~~~~~~v~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~-----~~~~~~~~~~~~~~  201 (291)
                                              ..+|+|+++.|+|++++.+||+++|||++.+..+.++     .+....++..+.+ 
T Consensus       176 ~~~~~f~p~~~~~~~~~~~~~~~~~~~idHv~i~V~dl~~a~~FY~~~LGf~~~~~~~~~d~~~~~~gl~s~~l~~~~g-  254 (424)
T 1sqd_A          176 TEKSEFLPGFERVEDASSFPLDYGIRRLDHAVGNVPELGPALTYVAGFTGFHQFAEFTADDVGTAESGLNSAVLASNDE-  254 (424)
T ss_dssp             -----CCTTCEECCTTTCCCCCSSEEEEEEEEEECSCHHHHHHHHHHHHCCEEEEEEC--------CCEEEEEEECTTS-
T ss_pred             CCccccCCCcccccccccCCCcCCcceEeeEEEeeCCHHHHHHHHHHhhCCeEEEEEcccccccccccceEEEEEcCCC-
Confidence                                    1258999999999999999999999999887764332     1334444543333 


Q ss_pred             ceeEEEEeeecC---cc-e------eecCcceeEEEEEecchHHhHHHHHHHHHHhCCeeecCC
Q 022818          202 QTTVLELTYNYG---VT-E------YTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQP  255 (291)
Q Consensus       202 ~~~~l~l~~~~~---~~-~------~~~~~~~~hi~~~v~di~~~~~~l~~~~~~~G~~~~~~~  255 (291)
                       ...|++.....   .. .      ...|+|++||||.|+||.+++++|++++..+|++++..|
T Consensus       255 -~~~l~l~e~~~~~~~~s~i~~fl~~~~G~G~~HIAf~vdDI~~a~~~L~~r~~~~Gv~~l~~p  317 (424)
T 1sqd_A          255 -MVLLPINEPVHGTKRKSQIQTYLEHNEGAGLQHLALMSEDIFRTLREMRKRSSIGGFDFMPSP  317 (424)
T ss_dssp             -CSEEEEEEECCC---CCHHHHHHHHHTSCEEEEEEEEESCHHHHHHHHHHHGGGTSCCBCCCC
T ss_pred             -cEEEEEecccccCCCcchhhhhhhhcCCCCcCEEEEEeCCHHHHHHHHHhhhccCCcEEecCC
Confidence             45666655431   11 1      125779999999999999999999322222899998875

>1sp8_A 4-hydroxyphenylpyruvate dioxygenase; oxidoreductase; 2.00A {Zea mays} SCOP: d.32.1.3 d.32.1.3

Probab=99.94  E-value=4.2e-25  Score=193.74  Aligned_cols=227  Identities=16%  Similarity=0.192  Sum_probs=157.9

Q ss_pred             CCcceeeEEEEEEeCCHHHHHHHHHhhcCCEEEEEeecCCC--ceeEEEEecCCCCcceEEEeeecCCCC----------
Q 022818           18 KKDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEE--KYSNAFLGFGPEQSHFVVELTYNYGVT----------   85 (291)
Q Consensus        18 ~~~~~~i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~~~~~~~~~----------   85 (291)
                      ...+++|+||.|.|+|++++.+||++.|||++..+...+.+  ....+++..++  ..+.+  .......          
T Consensus        26 ~~~i~~l~hV~i~V~Dle~a~~fY~~~LGf~~~~~~~~~~G~~~~~~~~~~~G~--~~l~L--~~~~~~~~~~~~~p~~~  101 (418)
T 1sp8_A           26 RFHTLAFHHVELWCADAASAAGRFSFGLGAPLAARSDLSTGNSAHASLLLRSGS--LSFLF--TAPYAHGADAATAALPS  101 (418)
T ss_dssp             SSCEEEEEEEEEECSCHHHHHHHHHHHHTCCEEEEESGGGTCCSEEEEEEEETT--EEEEE--EEECCSSCCGGGCSSTT
T ss_pred             cccCceEEEEEEEeCCHHHHHHHHHHhCCCEEEEEEcCCCCCcceEEEEEeeCC--EEEEE--ecCCCCccccccccccc
Confidence            34589999999999999999999999999999877543322  34555565443  33333  3321110          


Q ss_pred             ---c------ccCCCCceEEEEEeCCHHHHHHHHHHcCCeeecCCeecCCCceEEEEEECCCCCEEEEEeCCC-------
Q 022818           86 ---S------YDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRGP-------  149 (291)
Q Consensus        86 ---~------~~~g~~~~~i~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~Dp~G~~iel~~~~~-------  149 (291)
                         .      ..+|.+++|++|+|+|+++++++++++|+++...|....++ ..+..+++|.|..+.|++...       
T Consensus       102 ~~~~~~~~~~~~hg~gv~~iAf~V~Dv~~a~~~l~~~Ga~~~~~p~~~~~~-~~~~~i~~~Gg~~~~lvd~~~~~~~~~f  180 (418)
T 1sp8_A          102 FSAAAARRFAADHGLAVRAVALRVADAEDAFRASVAAGARPAFGPVDLGRG-FRLAEVELYGDVVLRYVSYPDGAAGEPF  180 (418)
T ss_dssp             CCHHHHHHHHHHHSSEEEEEEEEESCHHHHHHHHHTTTCCEEEEEEEEETT-EEEEEEEEETTEEEEEEECCTTGGGSSS
T ss_pred             ccchhHHHHHhhcCCeeEEEEEEeCCHHHHHHHHHHCCCEEEeccccccCc-eEEEEEecCCCEEEEEEccCCCCCCccc
Confidence               1      02457899999999999999999999999988777543222 223445556666666655431       


Q ss_pred             ------------C---CCCceEEEeeeCChhhhHHHHHHhcCCeeeeeeccCCc-----cceEEEeccccCCceeEEEEe
Q 022818          150 ------------T---PEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEY-----KYTLAMLGYAEEDQTTVLELT  209 (291)
Q Consensus       150 ------------~---~~~~~~v~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~l~l~  209 (291)
                                  .   ..+|+|+++.|+|++++.+||+++|||++.+....++.     +....++..+.+  ...|++.
T Consensus       181 ~p~~~~~~~~~~~~~~~~~idHv~i~V~dl~~a~~FY~~vLGf~~~~~~~~~d~~~~~~gl~s~~l~~~~g--~i~l~l~  258 (418)
T 1sp8_A          181 LPGFEGVASPGAADYGLSRFDHIVGNVPELAPAAAYFAGFTGFHEFAEFTTEDVGTAESGLNSMVLANNSE--NVLLPLN  258 (418)
T ss_dssp             STTCEECCCTTCCCCSEEEEEEEEEECSCHHHHHHHHHHHHCCEEEEEEEC--------CEEEEEEECSSS--CCEEEEE
T ss_pred             CCCCcccCCCCCCCCCcceEeeEEEecCCHHHHHHHHHHHcCCEEEEEecccccccccccceEEEEEcCCC--cEEEEEe
Confidence                        0   12589999999999999999999999998877643221     233344543332  4556665


Q ss_pred             eecC---cce-------eecCcceeEEEEEecchHHhHHHHHHHHHH----hCCeeecCC
Q 022818          210 YNYG---VTE-------YTKGNAYAQVAISTDDVYKSAEVVNLVTQE----LGGKITRQP  255 (291)
Q Consensus       210 ~~~~---~~~-------~~~~~~~~hi~~~v~di~~~~~~l~~~~~~----~G~~~~~~~  255 (291)
                      .+..   ..+       ...|+|++||||.|+||++++++|    ++    +|++++..|
T Consensus       259 e~~~~~~~~s~i~~fl~~~~G~G~~HIAf~vdDI~~a~~~L----~~r~~~~Gv~~l~~P  314 (418)
T 1sp8_A          259 EPVHGTKRRSQIQTFLDHHGGPGVQHMALASDDVLRTLREM----QARSAMGGFEFMAPP  314 (418)
T ss_dssp             EECCCSSSCCHHHHHHHHHTSSEEEEEEEEETTHHHHHHHH----HTSGGGTSCCBCCCC
T ss_pred             ecccccCCCcchhhhhhccCCCCcCEEEEEeCCHHHHHHHH----hhhhccCCeEEccCC
Confidence            5421   111       125779999999999999999999    88    799998876

>1cjx_A 4-hydroxyphenylpyruvate dioxygenase; oxidoreductase, iron; 2.40A {Pseudomonas fluorescens} SCOP: d.32.1.3 d.32.1.3

Probab=99.93  E-value=5.2e-25  Score=190.54  Aligned_cols=219  Identities=14%  Similarity=0.121  Sum_probs=152.0

Q ss_pred             CCcceeeEEEEEEeCCHHHHHHHHHhhcCCEEEEEeecCCCceeEEEEecCCCCcceEEEeeecCCCC--c--ccCCCCc
Q 022818           18 KKDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVT--S--YDIGTGF   93 (291)
Q Consensus        18 ~~~~~~i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~--~--~~~g~~~   93 (291)
                      ++.+++++||.+.|+|++++.+|| +.|||+++.+....    ..+.+..+  ...+++  .......  .  ..+|.++
T Consensus         7 ~~~i~~l~hV~~~V~D~~~~~~fy-~~LGf~~~~~~~~~----~~~l~~~g--~~~l~l--~~~~~~~~~~~~~~~g~gv   77 (357)
T 1cjx_A            7 PMGLMGFEFIEFASPTPGTLEPIF-EIMGFTKVATHRSK----NVHLYRQG--EINLIL--NNEPNSIASYFAAEHGPSV   77 (357)
T ss_dssp             TTCEEEEEEEEEECSSTTSSHHHH-HHTTCEEEEEESSS----SEEEEEET--TEEEEE--ECCSSSHHHHHHHHHSSEE
T ss_pred             CcccceEEEEEEEeCCHHHHHHHH-HHCCCEEEEEeCCe----eEEEEecC--CEEEEE--ECCCCchhhhhhhhcCCeE
Confidence            367999999999999999999999 78999998765421    13334433  233333  3222111  0  1246789


Q ss_pred             eEEEEEeCCHHHHHHHHHHcCCeeecCCeecCCCceEEEEEECCCCCEEEEEeCCCC-----------------------
Q 022818           94 GHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRGPT-----------------------  150 (291)
Q Consensus        94 ~~i~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~Dp~G~~iel~~~~~~-----------------------  150 (291)
                      .+++|.|+|+++++++++++|+++...+..  .|......+++|+|..++|++....                       
T Consensus        78 ~~iaf~V~D~~~~~~~l~~~G~~~~~~~~~--~g~~~~~~~~~~gg~~~~~vd~~~~~~~~~~~~f~~~~~~~~~~~~~~  155 (357)
T 1cjx_A           78 CGMAFRVKDSQKAYNRALELGAQPIHIDTG--PMELNLPAIKGIGGAPLYLIDRFGEGSSIYDIDFVYLEGVERNPVGAG  155 (357)
T ss_dssp             EEEEEEESCHHHHHHHHHHTTCCBCCCCCC--TTCBCCCEEECGGGCEEEEECCCSSSCCHHHHHEEECTTCCSSCCTTS
T ss_pred             EEEEEEeCCHHHHHHHHHHcCCEEeecCCC--CCcEEEEeeeCCCCeEEEEECCCCCCCCcCCCCcccCCccccCCCCCC
Confidence            999999999999999999999988766532  1222235567777777777765311                       


Q ss_pred             CCCceEEEeeeC--ChhhhHHHHHHhcCCeeeeeeccCC--ccc--eEEEeccccCCceeEEEEeee-cCcce-------
Q 022818          151 PEPLCQVMLRVG--DLGRSIKFYEKALGMKLLRTVDKPE--YKY--TLAMLGYAEEDQTTVLELTYN-YGVTE-------  216 (291)
Q Consensus       151 ~~~~~~v~l~v~--d~~~~~~fy~~~lG~~~~~~~~~~~--~~~--~~~~~~~~~~~~~~~l~l~~~-~~~~~-------  216 (291)
                      ..+++|+++.|+  |++++.+||+++|||++....+..+  .+.  ...++.  .  ....|++..+ .....       
T Consensus       156 i~~idHv~l~V~~~dl~~a~~FY~~vLGf~~~~~~~~~~~~~~~~~~~~~~~--~--g~~~i~L~~~~~~~~~~~~~~~~  231 (357)
T 1cjx_A          156 LKVIDHLTHNVYRGRMVYWANFYEKLFNFREARYFDIKGEYTGLTSKAMSAP--D--GMIRIPLNEESSKGAGQIEEFLM  231 (357)
T ss_dssp             EEEEEEECEECCTTHHHHHHHHHHHHHCCEEEEEEEEECSSCEEEEEEEECT--T--SSCEEEEEEECTTCCSHHHHHHH
T ss_pred             eeEECceEEeechhhHHHHHHHHHHhhCCceeeEEEeccCCcceEEEEEECC--C--CCEEEEEeeecCCCCChHHHhHH
Confidence            124889999999  9999999999999999887654222  111  222222  2  2456677654 22111       


Q ss_pred             eecCcceeEEEEEecchHHhHHHHHHHHHHhCCeeec-CC
Q 022818          217 YTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITR-QP  255 (291)
Q Consensus       217 ~~~~~~~~hi~~~v~di~~~~~~l~~~~~~~G~~~~~-~~  255 (291)
                      ...+.+++||||.|+|+++++++|    +++|+++.. .|
T Consensus       232 ~~~g~g~~HiAf~v~Di~~~~~~L----~~~Gv~~~~~~p  267 (357)
T 1cjx_A          232 QFNGEGIQHVAFLTDDLVKTWDAL----KKIGMRFMTAPP  267 (357)
T ss_dssp             HHTSSBCCEEEEEESCHHHHHHHH----HHTTCCBCCCCC
T ss_pred             hcCCCCeeEEEEEcCCHHHHHHHH----HHcCCcccCCCC
Confidence            124568999999999999999999    999999887 55

>1f9z_A Glyoxalase I; beta-alpha-beta-BETA-beta motif, protein-NI(II) complex, homodimer, lyase; 1.50A {Escherichia coli} SCOP: d.32.1.1 PDB: 1fa5_A 1fa6_A 1fa7_A 1fa8_A

Probab=99.87  E-value=1e-20  Score=140.51  Aligned_cols=129  Identities=57%  Similarity=1.012  Sum_probs=99.1

Q ss_pred             eeeEEEEEEeCCHHHHHHHHHhhcCCEEEEEeecCCCceeEEEEecCCCCcceEEEeeecCCCCcccCCCCceEEEEEeC
Q 022818           22 RRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIATE  101 (291)
Q Consensus        22 ~~i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~~~~i~~~v~  101 (291)
                      ++|+|+.|.|+|++++.+||+++|||++......+++.+..+++..++......+.+...........+.+..|++|.|+
T Consensus         1 m~l~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~v~   80 (135)
T 1f9z_A            1 MRLLHTMLRVGDLQRSIDFYTKVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNWGVDKYELGTAYGHIALSVD   80 (135)
T ss_dssp             CCEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEETTTTEEEEEEESSCTTTSCEEEEEEETTCCCCCCCSSEEEEEEECS
T ss_pred             CcceEEEEEeCCHHHHHHHHHhccCcEEEEecccCCCceEEEEEecCCCCCCcEEEEEEcCCCCcccCCCCccEEEEEeC
Confidence            47999999999999999999999999998776555555666777765432234455554333222334557889999999


Q ss_pred             CHHHHHHHHHHcCCeeecCCeecCCCceEEEEEECCCCCEEEEEeCCCC
Q 022818          102 DVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRGPT  150 (291)
Q Consensus       102 d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~Dp~G~~iel~~~~~~  150 (291)
                      |+++++++|+++|+++..+|...++|..++++|+||+||.|||++..+.
T Consensus        81 d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~DPdG~~iel~~~~~~  129 (135)
T 1f9z_A           81 NAAEACEKIRQNGGNVTREAGPVKGGTTVIAFVEDPDGYKIELIEEKDA  129 (135)
T ss_dssp             CHHHHHHHHHHTTCEEEEEEEECTTSCCEEEEEECTTSCEEEEEEC---
T ss_pred             CHHHHHHHHHHCCCEEecCCccCCCCceeEEEEECCCCCEEEEEecCCC
Confidence            9999999999999999888777777765558899999999999997643

>1f9z_A Glyoxalase I; beta-alpha-beta-BETA-beta motif, protein-NI(II) complex, homodimer, lyase; 1.50A {Escherichia coli} SCOP: d.32.1.1 PDB: 1fa5_A 1fa6_A 1fa7_A 1fa8_A

Probab=99.86  E-value=1e-20  Score=140.49  Aligned_cols=129  Identities=49%  Similarity=0.856  Sum_probs=98.6

Q ss_pred             CCceEEEeeeCChhhhHHHHHHhcCCeeeeeeccCCccceEEEeccccCCceeEEEEeeecCcceeecCcceeEEEEEec
Q 022818          152 EPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTD  231 (291)
Q Consensus       152 ~~~~~v~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~hi~~~v~  231 (291)
                      +++.|+.|.|+|++++.+||+++|||++......+++.+.++++..+.......+++...........+.+..|++|.|+
T Consensus         1 m~l~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~v~   80 (135)
T 1f9z_A            1 MRLLHTMLRVGDLQRSIDFYTKVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNWGVDKYELGTAYGHIALSVD   80 (135)
T ss_dssp             CCEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEETTTTEEEEEEESSCTTTSCEEEEEEETTCCCCCCCSSEEEEEEECS
T ss_pred             CcceEEEEEeCCHHHHHHHHHhccCcEEEEecccCCCceEEEEEecCCCCCCcEEEEEEcCCCCcccCCCCccEEEEEeC
Confidence            36899999999999999999999999988766544455566666654422245677765443322234557889999999


Q ss_pred             chHHhHHHHHHHHHHhCCeeecCCccCCCCCceEEEEECCCCceEEEeechhh
Q 022818          232 DVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNEDF  284 (291)
Q Consensus       232 di~~~~~~l~~~~~~~G~~~~~~~~~~~~~~~~~~~~~DpdG~~iel~~~~~~  284 (291)
                      |+++++++|    +++|+++..+|...+++..+++||+|||||.|||++....
T Consensus        81 d~~~~~~~l----~~~G~~~~~~~~~~~~g~~~~~~~~DPdG~~iel~~~~~~  129 (135)
T 1f9z_A           81 NAAEACEKI----RQNGGNVTREAGPVKGGTTVIAFVEDPDGYKIELIEEKDA  129 (135)
T ss_dssp             CHHHHHHHH----HHTTCEEEEEEEECTTSCCEEEEEECTTSCEEEEEEC---
T ss_pred             CHHHHHHHH----HHCCCEEecCCccCCCCceeEEEEECCCCCEEEEEecCCC
Confidence            999999999    9999999888877665334689999999999999997653

>4g6x_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 1.73A {Catenulispora acidiphila}

Probab=99.86  E-value=3.3e-21  Score=146.99  Aligned_cols=126  Identities=18%  Similarity=0.173  Sum_probs=91.0

Q ss_pred             cceeeEEEEEEeCCHHHHHHHHHhhcCCEEEEEeecCCCceeEEEEecCCCCcceEEEeeecCCCC--cc---cCCCCce
Q 022818           20 DKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVT--SY---DIGTGFG   94 (291)
Q Consensus        20 ~~~~i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~--~~---~~g~~~~   94 (291)
                      ..|+|.|+.|.|+|+++|++||+++|||++..+.+..+.  +...+..........+.........  +.   ..+.+..
T Consensus        23 ~~Mri~~v~I~V~Dle~A~~FY~dvLGf~v~~d~~~~~~--~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~g~~  100 (155)
T 4g6x_A           23 NAMRIHLTNVFVDDQAKAESFYTGKLGFLVKADVPVGAD--RWLTVVSPEAPDGTQLLLEPSSHAAVTPFKEALVADGIP  100 (155)
T ss_dssp             CCCCCCEEEEEESCHHHHHHHHHHTTCCEEEEEEEETTE--EEEEEECTTCTTSCEEEEEECCSTTHHHHHHHHHHTTCC
T ss_pred             CceEEEEEEEEeCCHHHHHHHHHHHhCCEEEEeecCCCc--eEEEEeccCCCcceEEEeccCCCccccccccccccCCce
Confidence            356899999999999999999999999998876554432  3333333222222223222221111  11   1234778


Q ss_pred             EEEEEeCCHHHHHHHHHHcCCeeecCCeecCCCceEEEEEECCCCCEEEEEeCCC
Q 022818           95 HFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRGP  149 (291)
Q Consensus        95 ~i~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~Dp~G~~iel~~~~~  149 (291)
                      |++|.|+|+++++++|+++|+++..+|.+.++|.  +++|+|||||+|||+|..+
T Consensus       101 ~l~f~VdDvda~~~~l~~~Gv~~~~~p~~~~~g~--~~~f~DPdGn~iel~q~~~  153 (155)
T 4g6x_A          101 AASFAVDDIAAEYERLSALGVRFTQEPTDMGPVV--TAILDDTCGNLIQLMQIAY  153 (155)
T ss_dssp             SEEEEESCHHHHHHHHHHTTCCEEEEEEECSSCE--EEEEECSSSCEEEEEEC--
T ss_pred             EEEeeechhhhhhhHHhcCCcEEeeCCEEcCCeE--EEEEECCCCCEEEEEEECC
Confidence            9999999999999999999999998888888763  4889999999999999753

>4g6x_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 1.73A {Catenulispora acidiphila}

Probab=99.86  E-value=3.5e-21  Score=146.86  Aligned_cols=126  Identities=17%  Similarity=0.143  Sum_probs=92.9

Q ss_pred             CCCCCceEEEeeeCChhhhHHHHHHhcCCeeeeeeccCCccceEEEeccccCCceeEEEEeeecCcce-----eecCcce
Q 022818          149 PTPEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTE-----YTKGNAY  223 (291)
Q Consensus       149 ~~~~~~~~v~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~-----~~~~~~~  223 (291)
                      ...++|.|+.|.|+|+++|++||+++|||++..+.+.++.  ++..+..........+.+.....+..     ...+.+.
T Consensus        22 ~~~Mri~~v~I~V~Dle~A~~FY~dvLGf~v~~d~~~~~~--~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~g~   99 (155)
T 4g6x_A           22 SNAMRIHLTNVFVDDQAKAESFYTGKLGFLVKADVPVGAD--RWLTVVSPEAPDGTQLLLEPSSHAAVTPFKEALVADGI   99 (155)
T ss_dssp             -CCCCCCEEEEEESCHHHHHHHHHHTTCCEEEEEEEETTE--EEEEEECTTCTTSCEEEEEECCSTTHHHHHHHHHHTTC
T ss_pred             cCceEEEEEEEEeCCHHHHHHHHHHHhCCEEEEeecCCCc--eEEEEeccCCCcceEEEeccCCCccccccccccccCCc
Confidence            3467999999999999999999999999998776654443  33333332322233333322222111     1133477


Q ss_pred             eEEEEEecchHHhHHHHHHHHHHhCCeeecCCccCCCCCceEEEEECCCCceEEEeech
Q 022818          224 AQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNE  282 (291)
Q Consensus       224 ~hi~~~v~di~~~~~~l~~~~~~~G~~~~~~~~~~~~~~~~~~~~~DpdG~~iel~~~~  282 (291)
                      .|++|.|+|+++++++|    +++|+++..+|...++  ++.+||+|||||+|||+|..
T Consensus       100 ~~l~f~VdDvda~~~~l----~~~Gv~~~~~p~~~~~--g~~~~f~DPdGn~iel~q~~  152 (155)
T 4g6x_A          100 PAASFAVDDIAAEYERL----SALGVRFTQEPTDMGP--VVTAILDDTCGNLIQLMQIA  152 (155)
T ss_dssp             CSEEEEESCHHHHHHHH----HHTTCCEEEEEEECSS--CEEEEEECSSSCEEEEEEC-
T ss_pred             eEEEeeechhhhhhhHH----hcCCcEEeeCCEEcCC--eEEEEEECCCCCEEEEEEEC
Confidence            89999999999999999    9999999999988776  48899999999999999864

>3l7t_A SMU.1112C, putative uncharacterized protein; metal binding protein; 1.80A {Streptococcus mutans}

Probab=99.85  E-value=3.9e-20  Score=136.90  Aligned_cols=123  Identities=25%  Similarity=0.324  Sum_probs=93.9

Q ss_pred             CcceeeEEEEEEeCCHHHHHHHHHhhcCCEEEEEeecCCCceeEEEEecCCCCcceEEEeee-------cCCC---Cccc
Q 022818           19 KDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTY-------NYGV---TSYD   88 (291)
Q Consensus        19 ~~~~~i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-------~~~~---~~~~   88 (291)
                      +++++|+||.|.|+|++++++||+++|||++..+...++......++..++.    .+++..       ....   ....
T Consensus         1 M~i~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~----~l~l~~~~~~~~~~~~~~~~~~~~   76 (134)
T 3l7t_A            1 MKLKAVHHVALIVSDYDKSYEFYVNQLGFEVIRENHRPKRHDYKLDLKCGDI----ELEIFGNKLTDSNYCAPPERISWP   76 (134)
T ss_dssp             -CCCEEEEEEEECSCHHHHHHHHHHTSCCEEEEEEEETTTTEEEEEEEETTE----EEEEEECCTTSTTCCCCCCCCCSS
T ss_pred             CceeeEeEEEEEeCCHHHHHHHHHHhcCCEEEEEeecCCCcceEEEEecCCe----EEEEEecccccccccCCccccCCC
Confidence            3588999999999999999999999999999887665555444566665532    333433       1111   1111


Q ss_pred             -CCCCceEEEEEeCCHHHHHHHHHHcCCeeecCCeecCCCceEEEEEECCCCCEEEEEe
Q 022818           89 -IGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQ  146 (291)
Q Consensus        89 -~g~~~~~i~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~Dp~G~~iel~~  146 (291)
                       .+.+..|++|.|+|+++++++|+++|+++...+....+|.. .++++||+||.|||+|
T Consensus        77 ~~~~g~~~~~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~g~~-~~~~~DPdG~~iel~e  134 (134)
T 3l7t_A           77 REACGLRHLAFYVEDVEASRQELIALGIRVEEVRYDDYTGKK-MAFFFDPDGLPLELHE  134 (134)
T ss_dssp             SCCSEEEEEEEECSCHHHHHHHHHHHTCCCCCCEECTTSCCE-EEEEECTTCCEEEEEC
T ss_pred             CCCCCeEEEEEEECCHHHHHHHHHhCCCcccceeccCCCceE-EEEEECCCCCEEEEeC
Confidence             45578899999999999999999999998877666666655 4899999999999985

>4hc5_A Glyoxalase/bleomycin resistance protein/dioxygena; MCSG, GEBA genomes, structural genomics, midwest center for structural genomics; HET: MSE GOL; 1.45A {Sphaerobacter thermophilus}

Probab=99.84  E-value=2.6e-19  Score=132.47  Aligned_cols=125  Identities=17%  Similarity=0.225  Sum_probs=94.2

Q ss_pred             CCcceeeEEEEEEeCCHHHHHHHHHhhcCCEEEEEeecCCCceeEEEEecCCCCcceEEEeeecCCCCcccCCCCceEEE
Q 022818           18 KKDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFA   97 (291)
Q Consensus        18 ~~~~~~i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~~~~i~   97 (291)
                      .+|+++|+|+.|.|+|++++.+||+++|||++.......++ .....+..++.  ...+.+.............+..|++
T Consensus         8 ~~m~~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~-~~~~~~~~~~~--~~~l~l~~~~~~~~~~~~~~~~~~~   84 (133)
T 4hc5_A            8 SLMIAYVHSATIIVSDQEKALDFYVNTLGFEKVFDNQLDPN-MRFVTVVPPGA--QTQVALGLPSWYEDGRKPGGYTGIS   84 (133)
T ss_dssp             CCSCCEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEEETT-EEEEEEECTTC--SCEEEEECGGGCSSCCCSCEEEEEE
T ss_pred             cccccceeEEEEEECCHHHHHHHHHhCcCCcEeeecccCCC-ceEEEEECCCC--ceEEEEecCcccccccCCCCeEEEE
Confidence            45789999999999999999999999999999876543222 23344443332  2334444332111111234678999


Q ss_pred             EEeCCHHHHHHHHHHcCCeeecCCeecCCCceEEEEEECCCCCEEEEEe
Q 022818           98 IATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQ  146 (291)
Q Consensus        98 ~~v~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~Dp~G~~iel~~  146 (291)
                      |.|+|+++++++|+++|+++..+|...++|.. .++++||+||.|+|++
T Consensus        85 ~~v~d~~~~~~~l~~~G~~~~~~~~~~~~g~~-~~~~~DP~G~~~el~e  132 (133)
T 4hc5_A           85 LITRDIDEAYKTLTERGVTFTKPPEMMPWGQR-ATWFSDPDGNQFFLVE  132 (133)
T ss_dssp             EEESCHHHHHHHHHHTTCEESSSCEECTTSCE-EEEEECTTCEEEEEEE
T ss_pred             EEeCCHHHHHHHHHHCCCEeecCCCcCCCCCE-EEEEECCCCCEEEEEe
Confidence            99999999999999999999988888888764 4899999999999987

>2c21_A Trypanothione-dependent glyoxalase I; lyase, glutathionylspermidine, methylglyoxal, detoxification; 2.0A {Leishmania major} SCOP: d.32.1.1

Probab=99.83  E-value=1.9e-19  Score=135.36  Aligned_cols=125  Identities=55%  Similarity=0.920  Sum_probs=93.3

Q ss_pred             CcceeeEEEEEEeCCHHHHHHHHHhhcCCEEEEEeecCCCceeEEEEecCCCCcceEEEeeecCCCCcccCCCCceEEEE
Q 022818           19 KDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAI   98 (291)
Q Consensus        19 ~~~~~i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~~~~i~~   98 (291)
                      +++++|+|+.|.|+|++++.+||+++|||++......+++.+...++..++......+.+...........+.+..|++|
T Consensus         4 m~~~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~l~~~~~~~~~~~~~~~~h~~f   83 (144)
T 2c21_A            4 MPSRRMLHTMIRVGDLDRSIKFYTERLGMKVLRKWDVPEDKYTLVFLGYGPEMSSTVLELTYNYGVTSYKHDEAYGHIAI   83 (144)
T ss_dssp             --CCEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEEGGGTEEEEEEESSCTTTSCEEEEEEETTCCCCCCCSSEEEEEE
T ss_pred             CccceeEEEEEEeCCHHHHHHHHHhcCCCEEEEeeecCCCCeEEEEEEcCCCCCceEEEEEecCCCCCCCCCCCceEEEE
Confidence            56899999999999999999999999999998765544445556777765431233455554433222234557899999


Q ss_pred             EeCCHHHHHHHHHHcCCeeecCCeecCCCceEEEEEECCCCCEEEEEeCC
Q 022818           99 ATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRG  148 (291)
Q Consensus        99 ~v~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~Dp~G~~iel~~~~  148 (291)
                      .|+|+++++++|+++|+++..+     +|...+++|+||+||.|||++..
T Consensus        84 ~v~d~~~~~~~l~~~G~~~~~~-----~g~~~~~~~~DPdG~~iel~~~~  128 (144)
T 2c21_A           84 GVEDVKELVADMRKHDVPIDYE-----DESGFMAFVVDPDGYYIELLNEK  128 (144)
T ss_dssp             EESCHHHHHHHHHHTTCCEEEE-----CSSSSEEEEECTTSCEEEEEEHH
T ss_pred             EeCCHHHHHHHHHHCCCEEecc-----CCcEEEEEEECCCCCEEEEEEcC
Confidence            9999999999999999987654     44444348999999999999753

>3rmu_A Methylmalonyl-COA epimerase, mitochondrial; structural genomics consortium, SGC, vitamin B12, mitochondr isomerase; HET: PG4; 1.80A {Homo sapiens} SCOP: d.32.1.0

Probab=99.83  E-value=7.2e-20  Score=135.44  Aligned_cols=123  Identities=24%  Similarity=0.384  Sum_probs=91.6

Q ss_pred             cceeeEEEEEEeCCHHHHHHHHHhhcCCEEEEEeecCCCceeEEEEecCCCCcceEEEeeecCCC-Ccc------cCCCC
Q 022818           20 DKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGV-TSY------DIGTG   92 (291)
Q Consensus        20 ~~~~i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~~~------~~g~~   92 (291)
                      |+++|+|+.|.|+|++++.+||+++|||++..+...++.....+++..++..    +++...... .+.      ..+.+
T Consensus         2 m~~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~----~~l~~~~~~~~~~~~~~~~~~~~g   77 (134)
T 3rmu_A            2 MLGRLNHVAIAVPDLEKAAAFYKNILGAQVSEAVPLPEHGVSVVFVNLGNTK----MELLHPLGLDSPIAGFLQKNKAGG   77 (134)
T ss_dssp             CEEEEEEEEEECSCHHHHHHHHHHTSCCEECCCEEEGGGTEEEEEEECSSSE----EEEEEECSTTCTTHHHHHHCTTCE
T ss_pred             ccceeeeEEEEeCCHHHHHHHHHHhcCCEEeEeeecCCCCEEEEEEecCCEE----EEEEecCCCCchhhhhhhccCCCC
Confidence            6899999999999999999999999999998765555545567777765432    333322211 111      23457


Q ss_pred             ceEEEEEeCCHHHHHHHHHHcCCeeecCC-eecCCCceEEEEE--ECCCCCEEEEEeC
Q 022818           93 FGHFAIATEDVYKLVENIRAKGGNVTREP-GPLKGGTTHIAFV--KDPDGYIFELIQR  147 (291)
Q Consensus        93 ~~~i~~~v~d~~~~~~~l~~~G~~~~~~~-~~~~~g~~~~~~~--~Dp~G~~iel~~~  147 (291)
                      ..|++|.|+|+++++++|+++|+++..++ ....+|.. ..++  +||+||.|||++.
T Consensus        78 ~~hi~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~~g~~-~~~~~~~DPdG~~iel~e~  134 (134)
T 3rmu_A           78 MHHICIEVDNINAAVMDLKKKKIRSLSEEVKIGAHGKP-VIFLHPKDCGGVLVELEQA  134 (134)
T ss_dssp             EEEEEEEESCHHHHHHHHHHTTCTTBCCCCEECTTSSE-EEEECSCSSCCSCEEEEEC
T ss_pred             ceEEEEEcCCHHHHHHHHHHcCCcccCCCcccCCCCce-EEEEecCCCCcEEEEEEcC
Confidence            89999999999999999999999977664 33444543 3555  8999999999873

>3pkv_A Toxoflavin lyase (TFLA); metalloenzyme, vicinal oxygen chelate superfamily; 1.34A {Paenibacillus polymyxa} PDB: 3pkw_A 3pkx_A* 3oul_A 3oum_A*

Probab=99.83  E-value=1.3e-19  Score=148.42  Aligned_cols=147  Identities=17%  Similarity=0.219  Sum_probs=110.2

Q ss_pred             CCcceeeEEEEEEeCCHHHHHHHHHhhcCCEEEEEeecCCCceeEEEEecCCCCcceEEEeeecCCCCcccCCCCceEEE
Q 022818           18 KKDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFA   97 (291)
Q Consensus        18 ~~~~~~i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~~~~i~   97 (291)
                      ...+++|+||.|.|+|++++.+||+++|||++..+.+      ..+++..++    ..+.+.....     .+.+..|++
T Consensus        21 ~~~~~~l~hV~L~V~Dle~s~~FY~~vLGl~~~~~~~------~~~~L~~g~----~~l~l~~~~~-----~~~~~~hia   85 (252)
T 3pkv_A           21 QGHMTSIKQLTLYTAELDRMLAFYTNMLGAQHVHEQA------DAFTIQLGV----SQIQFRAAAD-----GTKPFYHIA   85 (252)
T ss_dssp             ----CCEEEEEEEESCHHHHHHHHHHHHCGGGEEECS------SEEEEEETT----EEEEEEECCT-----TCCCCCEEE
T ss_pred             cCcCceEEEEEEEeCCHHHHHHHHHHhcCCEEEEccC------CEEEEEeCC----EEEEEEECCC-----CCCCeeEEE
Confidence            3458999999999999999999999999999876533      135565543    2344443321     133688999


Q ss_pred             EEeC--CHHHHHHHHHHcCCeeecC-Cee----cCCCceEEEEEECCCCCEEEEEeCCCC------------CCCceEEE
Q 022818           98 IATE--DVYKLVENIRAKGGNVTRE-PGP----LKGGTTHIAFVKDPDGYIFELIQRGPT------------PEPLCQVM  158 (291)
Q Consensus        98 ~~v~--d~~~~~~~l~~~G~~~~~~-~~~----~~~g~~~~~~~~Dp~G~~iel~~~~~~------------~~~~~~v~  158 (291)
                      |.|+  ++++++++|+++ +++..+ +..    ..++. +.+||+|||||.+||++....            +.++.||+
T Consensus        86 f~V~~~dld~~~~rL~~~-v~~~~~~~~~~~~~~~~g~-~~~~f~DPdGn~iEl~~~~~~~~~~~~~~~~~~i~glghV~  163 (252)
T 3pkv_A           86 INIAANHFQEGKAWLSGF-GELLTENDEDQAYFPFFNA-YSCYVEDPSGNIIELISRQQAAPVLDKPFSADQLLSIGEIN  163 (252)
T ss_dssp             EEECTTCHHHHHHHHTTS-SCCCCBTTBSCEEETTTTE-EEEEEECTTCCEEEEEEESSSSCCCCSCCCGGGCCEEEEEE
T ss_pred             EEecHHHHHHHHHHHHhc-ceEeccCCccccccccCCe-EEEEEECCCCCEEEEEEeCCCCccccCCCCHHHCcEeeeEE
Confidence            9984  599999999999 887652 222    23444 459999999999999997542            23689999


Q ss_pred             eeeCChhhhHHHHHHhcCCeeeee
Q 022818          159 LRVGDLGRSIKFYEKALGMKLLRT  182 (291)
Q Consensus       159 l~v~d~~~~~~fy~~~lG~~~~~~  182 (291)
                      |.|+|++++.+|| ++|||++...
T Consensus       164 L~v~d~~~~~~fl-~~LG~~~~~~  186 (252)
T 3pkv_A          164 ITTSDVEQAATRL-KQAELPVKLD  186 (252)
T ss_dssp             EECSCHHHHHHHH-HHTTCCCCGG
T ss_pred             EEeCCHHHHHHHH-HHcCCCcccC
Confidence            9999999999999 9999998754

>3e5d_A Putative glyoxalase I; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, lyase; 2.70A {Listeria monocytogenes str}

Probab=99.83  E-value=1.8e-19  Score=132.27  Aligned_cols=120  Identities=24%  Similarity=0.377  Sum_probs=93.2

Q ss_pred             eeeEEEEEEeCCHHHHHHHHHhhcCCEEEEEeecCCCceeEEEEecCCCCcceEEEeeecCCC--CcccCCCCceEEEEE
Q 022818           22 RRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGV--TSYDIGTGFGHFAIA   99 (291)
Q Consensus        22 ~~i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~--~~~~~g~~~~~i~~~   99 (291)
                      ++|+|+.|.|+|++++.+||+++|||++......++..+..+++..++ .  ..+.+......  .+...+.+..|++|.
T Consensus         2 m~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~-~--~~l~l~~~~~~~~~~~~~~~g~~hi~~~   78 (127)
T 3e5d_A            2 MKIEHVALWTTNLEQMKQFYVTYFGATANDLYENKTKGFNSYFLSFED-G--ARLEIMSRTDVTGKTTGENLGWAHIAIS   78 (127)
T ss_dssp             CCCCEEEEECSSHHHHHHHHHHHHCCEECCCEEEGGGTEEEEEEECSS-S--CEEEEEEETTCCCCCCSSCSSCCCEEEE
T ss_pred             CEEEEEEEEECCHHHHHHHHHHhcCCeeecccccCCCCccEEEEEcCC-C--cEEEEEecCCCCCCCCcCCCceEEEEEE
Confidence            578999999999999999999999999987654444455667776643 2  33444443322  222245678999999


Q ss_pred             eCC---HHHHHHHHHHcCCeeecCCeecCCCceEEEEEECCCCCEEEEE
Q 022818          100 TED---VYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELI  145 (291)
Q Consensus       100 v~d---~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~Dp~G~~iel~  145 (291)
                      |+|   +++++++|+++|+++...|...++|.+. ++|+||+||.|||+
T Consensus        79 v~d~~~v~~~~~~l~~~G~~~~~~~~~~~~g~~~-~~~~DPdG~~iel~  126 (127)
T 3e5d_A           79 TGTKEAVDELTEKLRQDGFAIAGEPRMTGDGYYE-SVVLDPEGNRIEIT  126 (127)
T ss_dssp             CSSHHHHHHHHHHHHHTTCCEEEEEEECTTSCEE-EEEECTTSCEEEEE
T ss_pred             cCCHHHHHHHHHHHHHcCCeEecCcccCCCCcEE-EEEECCCCCEEEEe
Confidence            999   8899999999999998887777776554 88999999999986

>2p25_A Glyoxalase family protein; structural genomics, MCSG, PSI-2, protein struct initiative, midwest center for structural genomics, oxidore; 1.70A {Enterococcus faecalis}

Probab=99.82  E-value=2.1e-19  Score=131.57  Aligned_cols=123  Identities=22%  Similarity=0.333  Sum_probs=90.1

Q ss_pred             CcceeeEEEEEEeCCHHHHHHHHHhhcCCEEEEEeecCCCceeEEEEecCCCCcceEEEeeecCC--CCc-ccCCCCceE
Q 022818           19 KDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYG--VTS-YDIGTGFGH   95 (291)
Q Consensus        19 ~~~~~i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~--~~~-~~~g~~~~~   95 (291)
                      +|+++++|+.|.|+|++++.+||+++||+++......++......++..++.    .+.+.....  ..+ ...+.+..|
T Consensus         1 M~~~~i~hi~l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~----~l~l~~~~~~~~~~~~~~~~g~~~   76 (126)
T 2p25_A            1 MFFKEIHHVAINASNYQATKNFYVEKLGFEVLRENHRPEKNDIKLDLKLGSQ----ELEIFISDQFPARPSYPEALGLRH   76 (126)
T ss_dssp             CTTSCCCCEEEEESCHHHHHHHHTTTTCCEEEEEEEEGGGTEEEEEEEETTE----EEEEEECTTCCCCCCSSCCSSCCC
T ss_pred             CcccccceEEEEeCCHHHHHHHHHHhcCCEEEeeccCCCCcceEEEEecCCe----EEEEEeccCCCCCCCCCCCccceE
Confidence            4688999999999999999999999999999865433322222344555442    344443211  111 123457889


Q ss_pred             EEEEeCCHHHHHHHHHHcCCeeecCCeecCCCceEEEEEECCCCCEEEEEe
Q 022818           96 FAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQ  146 (291)
Q Consensus        96 i~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~Dp~G~~iel~~  146 (291)
                      ++|.|+|+++++++|+++|+++...+....+|.. .++++||+||.|||++
T Consensus        77 ~~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~g~~-~~~~~DPdG~~iel~e  126 (126)
T 2p25_A           77 LAFKVEHIEEVIAFLNEQGIETEPLRVDDFTGKK-MTFFFDPDGLPLELHE  126 (126)
T ss_dssp             EEEECSCHHHHHHHHHHTTCCCCCCEECTTTCCE-EEEEECTTCCEEEEEC
T ss_pred             EEEEeCCHHHHHHHHHHcCCccccccccCCCCcE-EEEEECCCCCEEEeeC
Confidence            9999999999999999999998776665566654 4889999999999975

>3hdp_A Glyoxalase-I; glutathione,lyase, methylglyoxal,11003P,PSI2, structural GENOMIC,NYSGXRC., structural genomics; 2.06A {Clostridium acetobutylicum} PDB: 2qh0_A

Probab=99.82  E-value=7.6e-20  Score=135.54  Aligned_cols=123  Identities=21%  Similarity=0.218  Sum_probs=90.9

Q ss_pred             CcceeeEEEEEEeCCHHHHHHHHHhhcCCEEEEEe-ecCCCceeEEEEecCCCCcceEEEeeecCCCCcc----c-CCCC
Q 022818           19 KDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKR-DVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSY----D-IGTG   92 (291)
Q Consensus        19 ~~~~~i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~----~-~g~~   92 (291)
                      .|+++|+|++|.|+|++++++||+ +|||++..+. ..+.......++..++    ..+++.........    . .+.+
T Consensus         3 ~M~~~i~hv~i~v~Dl~~a~~FY~-~lG~~~~~~~~~~~~~~~~~~~~~~~~----~~l~l~~~~~~~~~~~~~~~~~~g   77 (133)
T 3hdp_A            3 HMSLKVHHIGYAVKNIDSALKKFK-RLGYVEESEVVRDEVRKVYIQFVINGG----YRVELVAPDGEDSPINKTIKKGST   77 (133)
T ss_dssp             CCCCCEEEEEEECSCHHHHHHHHH-HTTCEECSCCEEETTTTEEEEEEEETT----EEEEEEEESSTTCTHHHHTTTSCE
T ss_pred             ccceeeCEEEEEECCHHHHHHHHH-HcCCeeecceeccCCcceEEEEEeCCC----EEEEEEecCCCCChHHHHHhcCCc
Confidence            578999999999999999999999 9999986542 2233445666666543    23444433221111    1 1568


Q ss_pred             ceEEEEEeCCHHHHHHHHHHcCCeeecCCee--cCCCceEEEEEECCCCCEEEEEeC
Q 022818           93 FGHFAIATEDVYKLVENIRAKGGNVTREPGP--LKGGTTHIAFVKDPDGYIFELIQR  147 (291)
Q Consensus        93 ~~~i~~~v~d~~~~~~~l~~~G~~~~~~~~~--~~~g~~~~~~~~Dp~G~~iel~~~  147 (291)
                      ++|++|.|+|+++++++|+++|+++...|..  ..+|. +++|++||+||+|||++.
T Consensus        78 ~~hiaf~v~di~~~~~~l~~~G~~~~~~p~~~~~~~g~-~~~~~~dPdG~~iEl~e~  133 (133)
T 3hdp_A           78 PYHICYEVEDIQKSIEEMSQIGYTLFKKAEIAPAIDNR-KVAFLFSTDIGLIELLEK  133 (133)
T ss_dssp             EEEEEEEESCHHHHHHHHTTTTEEEEEEEEEEGGGTTE-EEEEEEETTTEEEEEEEC
T ss_pred             eEEEEEEcCCHHHHHHHHHHcCCccccCCeecccCCCc-eEEEEECCCceEEEEecC
Confidence            8899999999999999999999998775433  33454 458999999999999973

>3vw9_A Lactoylglutathione lyase; glyoxalase, lyase-lyase inhibitor complex; HET: EPE HPJ; 1.47A {Homo sapiens} PDB: 1qip_A* 1fro_A* 1qin_A* 1bh5_A* 2za0_A*

Probab=99.82  E-value=3.3e-19  Score=140.15  Aligned_cols=129  Identities=31%  Similarity=0.561  Sum_probs=101.5

Q ss_pred             CCCceEEEeeeCChhhhHHHHHHhcCCeeeeeeccCCccceEEEeccccCCc---------------eeEEEEeeecCcc
Q 022818          151 PEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQ---------------TTVLELTYNYGVT  215 (291)
Q Consensus       151 ~~~~~~v~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~l~l~~~~~~~  215 (291)
                      ..++.|+.|.|+|++++++||+++|||++......+++.+.+++++.+....               ...+++....+..
T Consensus        32 ~~~l~Hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~  111 (187)
T 3vw9_A           32 DFLLQQTMLRVKDPKKSLDFYTRVLGMTLIQKCDFPIMKFSLYFLAYEDKNDIPKEKDEKIAWALSRKATLELTHNWGTE  111 (187)
T ss_dssp             TCEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEETTTTEEEEEEESCCGGGSCSSHHHHHHHHTTCSSEEEEEEETTGG
T ss_pred             eeEEEEEEEEeCCHHHHHHHHHHhcCcEEeeccccCCCceeEEEecCCCcccccccccchhhhcccCCceEEEEEecCCC
Confidence            3579999999999999999999999999988777666677888887544211               2567776544322


Q ss_pred             -----eee----cCcceeEEEEEecchHHhHHHHHHHHHHhCCeeecCCccCCCCCceEEEEECCCCceEEEeechhhh
Q 022818          216 -----EYT----KGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNEDFL  285 (291)
Q Consensus       216 -----~~~----~~~~~~hi~~~v~di~~~~~~l~~~~~~~G~~~~~~~~~~~~~~~~~~~~~DpdG~~iel~~~~~~~  285 (291)
                           .+.    ...++.|++|.|+|+++++++|    +++|+++..+|...++  ++++||+|||||+|||++.....
T Consensus       112 ~~~~~~~~~g~~~~~g~~hl~f~v~dv~~~~~~l----~~~G~~~~~~~~~~~~--~~~~~~~DPdG~~iel~~~~~~~  184 (187)
T 3vw9_A          112 DDETQSYHNGNSDPRGFGHIGIAVPDVYSACKRF----EELGVKFVKKPDDGKM--KGLAFIQDPDGYWIEILNPNKMA  184 (187)
T ss_dssp             GCTTCCCCCSSSSSCBEEEEEEECSCHHHHHHHH----HHTTCCEEECTTSSSS--TTCEEEECTTCCEEEEECGGGSG
T ss_pred             CCCccccccCCCCCCceeEEEEEECCHHHHHHHH----HHCCCeEeeCCccCCc--ceEEEEECCCCCEEEEEEccccc
Confidence                 111    1237889999999999999999    9999999988876555  35789999999999999987643

>3e5d_A Putative glyoxalase I; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, lyase; 2.70A {Listeria monocytogenes str}

Probab=99.81  E-value=2.8e-19  Score=131.25  Aligned_cols=120  Identities=20%  Similarity=0.254  Sum_probs=93.4

Q ss_pred             CCceEEEeeeCChhhhHHHHHHhcCCeeeeeeccCCccceEEEeccccCCceeEEEEeeecCcce--eecCcceeEEEEE
Q 022818          152 EPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTE--YTKGNAYAQVAIS  229 (291)
Q Consensus       152 ~~~~~v~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~--~~~~~~~~hi~~~  229 (291)
                      +++.|+.|.|+|++++.+||+++|||++......++.++..+++..+.   +..+++.......+  ...+.+..|++|.
T Consensus         2 m~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~---~~~l~l~~~~~~~~~~~~~~~g~~hi~~~   78 (127)
T 3e5d_A            2 MKIEHVALWTTNLEQMKQFYVTYFGATANDLYENKTKGFNSYFLSFED---GARLEIMSRTDVTGKTTGENLGWAHIAIS   78 (127)
T ss_dssp             CCCCEEEEECSSHHHHHHHHHHHHCCEECCCEEEGGGTEEEEEEECSS---SCEEEEEEETTCCCCCCSSCSSCCCEEEE
T ss_pred             CEEEEEEEEECCHHHHHHHHHHhcCCeeecccccCCCCccEEEEEcCC---CcEEEEEecCCCCCCCCcCCCceEEEEEE
Confidence            578999999999999999999999999887655444445666666433   35667765443322  1244578999999


Q ss_pred             ecc---hHHhHHHHHHHHHHhCCeeecCCccCCCCCceEEEEECCCCceEEEe
Q 022818          230 TDD---VYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLV  279 (291)
Q Consensus       230 v~d---i~~~~~~l~~~~~~~G~~~~~~~~~~~~~~~~~~~~~DpdG~~iel~  279 (291)
                      |+|   +++++++|    +++|+++..+|...++ +.+.+||+|||||+|||+
T Consensus        79 v~d~~~v~~~~~~l----~~~G~~~~~~~~~~~~-g~~~~~~~DPdG~~iel~  126 (127)
T 3e5d_A           79 TGTKEAVDELTEKL----RQDGFAIAGEPRMTGD-GYYESVVLDPEGNRIEIT  126 (127)
T ss_dssp             CSSHHHHHHHHHHH----HHTTCCEEEEEEECTT-SCEEEEEECTTSCEEEEE
T ss_pred             cCCHHHHHHHHHHH----HHcCCeEecCcccCCC-CcEEEEEECCCCCEEEEe
Confidence            999   77888888    9999999888876655 457899999999999996

>1ss4_A Glyoxalase family protein; structural genomics, PSI, prote structure initiative, midwest center for structural genomic unknown function; HET: CIT GSH; 1.84A {Bacillus cereus} SCOP: d.32.1.6

Probab=99.81  E-value=2.6e-18  Score=130.18  Aligned_cols=126  Identities=17%  Similarity=0.261  Sum_probs=92.8

Q ss_pred             CcceeeEEEEEEeCCHHHHHHHHHhhcCCEEEEEeec-----------CCCceeEEEEecCCCCcceEEEeeec--CCCC
Q 022818           19 KDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDV-----------PEEKYSNAFLGFGPEQSHFVVELTYN--YGVT   85 (291)
Q Consensus        19 ~~~~~i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~l~~~~~--~~~~   85 (291)
                      .++++|+|+.|.|+|++++++||++ |||++......           ++.....+++..++....  +++...  ....
T Consensus         7 ~~~~~i~hv~l~v~D~~~a~~FY~~-lG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~--l~l~~~~~~~~~   83 (153)
T 1ss4_A            7 NKLLRMDNVSIVVESLDNAISFFEE-IGLNLEGRANVEGEWAGRVTGLGSQCVEIAMMVTPDGHSR--IELSRFLTPPTI   83 (153)
T ss_dssp             CCEEEEEEEEEECSCHHHHHHHHHH-HTCEEEEEEEECSHHHHHHHSCCSCEEEEEEEECTTSSCE--EEEEEEEESCCC
T ss_pred             ccccceeeEEEEeCCHHHHHHHHHH-CCCEEEeeccCCcchhheeeCCCCCcEEEEEEECCCCCcE--EEEEEecCCCCc
Confidence            4689999999999999999999999 99999865432           112345666766433222  333221  1111


Q ss_pred             -----cccCCCCceEEEEEeCCHHHHHHHHHHcCCeeecCCeecCCCceEEEEEECCCCCEEEEEeCC
Q 022818           86 -----SYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRG  148 (291)
Q Consensus        86 -----~~~~g~~~~~i~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~Dp~G~~iel~~~~  148 (291)
                           ....+.++.|++|.|+|+++++++|+++|+++..+|...++|.. .+||+||+||+|||++..
T Consensus        84 ~~~~~~~~~~~g~~hl~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~g~~-~~~~~DPdG~~iel~~~~  150 (153)
T 1ss4_A           84 ADHRTAPVNALGYLRVMFTVEDIDEMVSRLTKHGAELVGEVVQYENSYR-LCYIRGVEGILIGLAEEL  150 (153)
T ss_dssp             CBCTTCCSSSBEEEEEEEEESCHHHHHHHHHHTTCEESSCCEEETTTEE-EEEEECGGGCEEEEEEEC
T ss_pred             ccccCCCCCCCceEEEEEEeCCHHHHHHHHHHCCCeecCCCcccCCceE-EEEEECCCCCEEEEEecc
Confidence                 11134467899999999999999999999999888777666644 489999999999999864

>4hc5_A Glyoxalase/bleomycin resistance protein/dioxygena; MCSG, GEBA genomes, structural genomics, midwest center for structural genomics; HET: MSE GOL; 1.45A {Sphaerobacter thermophilus}

Probab=99.81  E-value=7.8e-19  Score=129.82  Aligned_cols=123  Identities=20%  Similarity=0.283  Sum_probs=92.8

Q ss_pred             CCCceEEEeeeCChhhhHHHHHHhcCCeeeeeeccCCccceEEEeccccCCceeEEEEeeecCcceeecCcceeEEEEEe
Q 022818          151 PEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAIST  230 (291)
Q Consensus       151 ~~~~~~v~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~hi~~~v  230 (291)
                      ..++.|+.|.|+|++++.+||+++|||++......+++ ..++.+..+.  ....+.+...........+.+..|++|.|
T Consensus        11 ~~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~-~~~~~~~~~~--~~~~l~l~~~~~~~~~~~~~~~~~~~~~v   87 (133)
T 4hc5_A           11 IAYVHSATIIVSDQEKALDFYVNTLGFEKVFDNQLDPN-MRFVTVVPPG--AQTQVALGLPSWYEDGRKPGGYTGISLIT   87 (133)
T ss_dssp             CCEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEEETT-EEEEEEECTT--CSCEEEEECGGGCSSCCCSCEEEEEEEEE
T ss_pred             ccceeEEEEEECCHHHHHHHHHhCcCCcEeeecccCCC-ceEEEEECCC--CceEEEEecCcccccccCCCCeEEEEEEe
Confidence            45799999999999999999999999998876543222 2444444322  24455554433111112234678999999


Q ss_pred             cchHHhHHHHHHHHHHhCCeeecCCccCCCCCceEEEEECCCCceEEEeec
Q 022818          231 DDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDN  281 (291)
Q Consensus       231 ~di~~~~~~l~~~~~~~G~~~~~~~~~~~~~~~~~~~~~DpdG~~iel~~~  281 (291)
                      +|+++++++|    +++|+++..+|...++ +.+++||+||+||.|||+|.
T Consensus        88 ~d~~~~~~~l----~~~G~~~~~~~~~~~~-g~~~~~~~DP~G~~~el~ee  133 (133)
T 4hc5_A           88 RDIDEAYKTL----TERGVTFTKPPEMMPW-GQRATWFSDPDGNQFFLVEE  133 (133)
T ss_dssp             SCHHHHHHHH----HHTTCEESSSCEECTT-SCEEEEEECTTCEEEEEEEC
T ss_pred             CCHHHHHHHH----HHCCCEeecCCCcCCC-CCEEEEEECCCCCEEEEEeC
Confidence            9999999999    9999999988888877 34899999999999999874

>2c21_A Trypanothione-dependent glyoxalase I; lyase, glutathionylspermidine, methylglyoxal, detoxification; 2.0A {Leishmania major} SCOP: d.32.1.1

Probab=99.80  E-value=1e-18  Score=131.40  Aligned_cols=124  Identities=44%  Similarity=0.703  Sum_probs=92.7

Q ss_pred             CCCceEEEeeeCChhhhHHHHHHhcCCeeeeeeccCCccceEEEeccccCCceeEEEEeeecCcceeecCcceeEEEEEe
Q 022818          151 PEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAIST  230 (291)
Q Consensus       151 ~~~~~~v~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~hi~~~v  230 (291)
                      ..++.|+.|.|+|++++.+||+++|||++......+++.+.+.++..+.......+++...........+.+..|++|.|
T Consensus         6 ~~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~l~~~~~~~~~~~~~~~~h~~f~v   85 (144)
T 2c21_A            6 SRRMLHTMIRVGDLDRSIKFYTERLGMKVLRKWDVPEDKYTLVFLGYGPEMSSTVLELTYNYGVTSYKHDEAYGHIAIGV   85 (144)
T ss_dssp             CCEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEEGGGTEEEEEEESSCTTTSCEEEEEEETTCCCCCCCSSEEEEEEEE
T ss_pred             cceeEEEEEEeCCHHHHHHHHHhcCCCEEEEeeecCCCCeEEEEEEcCCCCCceEEEEEecCCCCCCCCCCCceEEEEEe
Confidence            35789999999999999999999999998876544444455566664432124567776554322223456789999999


Q ss_pred             cchHHhHHHHHHHHHHhCCeeecCCccCCCCCceEEEEECCCCceEEEeechh
Q 022818          231 DDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNED  283 (291)
Q Consensus       231 ~di~~~~~~l~~~~~~~G~~~~~~~~~~~~~~~~~~~~~DpdG~~iel~~~~~  283 (291)
                      +|+++++++|    +++|+++..+     ++...++||+|||||.|||++...
T Consensus        86 ~d~~~~~~~l----~~~G~~~~~~-----~g~~~~~~~~DPdG~~iel~~~~~  129 (144)
T 2c21_A           86 EDVKELVADM----RKHDVPIDYE-----DESGFMAFVVDPDGYYIELLNEKT  129 (144)
T ss_dssp             SCHHHHHHHH----HHTTCCEEEE-----CSSSSEEEEECTTSCEEEEEEHHH
T ss_pred             CCHHHHHHHH----HHCCCEEecc-----CCcEEEEEEECCCCCEEEEEEcCc
Confidence            9999999999    9999998765     212234599999999999998765

>3rmu_A Methylmalonyl-COA epimerase, mitochondrial; structural genomics consortium, SGC, vitamin B12, mitochondr isomerase; HET: PG4; 1.80A {Homo sapiens} SCOP: d.32.1.0

Probab=99.80  E-value=4.9e-19  Score=130.88  Aligned_cols=122  Identities=19%  Similarity=0.253  Sum_probs=91.2

Q ss_pred             CCceEEEeeeCChhhhHHHHHHhcCCeeeeeeccCCccceEEEeccccCCceeEEEEeeecCccee-------ecCccee
Q 022818          152 EPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEY-------TKGNAYA  224 (291)
Q Consensus       152 ~~~~~v~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~-------~~~~~~~  224 (291)
                      .++.|+.|.|+|++++.+||+++|||++......++.+....++..+    ...+++....+....       ..+.+..
T Consensus         4 ~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~----~~~~~l~~~~~~~~~~~~~~~~~~~~g~~   79 (134)
T 3rmu_A            4 GRLNHVAIAVPDLEKAAAFYKNILGAQVSEAVPLPEHGVSVVFVNLG----NTKMELLHPLGLDSPIAGFLQKNKAGGMH   79 (134)
T ss_dssp             EEEEEEEEECSCHHHHHHHHHHTSCCEECCCEEEGGGTEEEEEEECS----SSEEEEEEECSTTCTTHHHHHHCTTCEEE
T ss_pred             ceeeeEEEEeCCHHHHHHHHHHhcCCEEeEeeecCCCCEEEEEEecC----CEEEEEEecCCCCchhhhhhhccCCCCce
Confidence            46899999999999999999999999988665544444566666643    245555544332211       2345889


Q ss_pred             EEEEEecchHHhHHHHHHHHHHhCCeeecCCccCCCCCceEEEE--ECCCCceEEEeec
Q 022818          225 QVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSF--VDPDGWKTVLVDN  281 (291)
Q Consensus       225 hi~~~v~di~~~~~~l~~~~~~~G~~~~~~~~~~~~~~~~~~~~--~DpdG~~iel~~~  281 (291)
                      |++|.|+|+++++++|    +++|+++..++......+.++.++  +|||||.|||+|.
T Consensus        80 hi~~~v~d~~~~~~~l----~~~G~~~~~~~~~~~~~g~~~~~~~~~DPdG~~iel~e~  134 (134)
T 3rmu_A           80 HICIEVDNINAAVMDL----KKKKIRSLSEEVKIGAHGKPVIFLHPKDCGGVLVELEQA  134 (134)
T ss_dssp             EEEEEESCHHHHHHHH----HHTTCTTBCCCCEECTTSSEEEEECSCSSCCSCEEEEEC
T ss_pred             EEEEEcCCHHHHHHHH----HHcCCcccCCCcccCCCCceEEEEecCCCCcEEEEEEcC
Confidence            9999999999999999    999999877754444334466666  8999999999973

>3oa4_A Glyoxalase, BH1468 protein; structural genomics, protein structure initiative, glyoxalas PSI-biology, lyase; 1.94A {Bacillus halodurans}

Probab=99.80  E-value=2e-19  Score=137.97  Aligned_cols=127  Identities=23%  Similarity=0.442  Sum_probs=97.0

Q ss_pred             CcceeeEEEEEEeCCHHHHHHHHHhhcCCEEEEEeecCCCceeEEEEecCCCCcceEEEeeecCCCCc-c-----cCCCC
Q 022818           19 KDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTS-Y-----DIGTG   92 (291)
Q Consensus        19 ~~~~~i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~-~-----~~g~~   92 (291)
                      .++++|+||+|.|+|++++++||+++|||++..+...++.....+++..++    ..+++........ .     ..+.+
T Consensus         4 ~~~~~i~Hv~l~V~Dl~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~g~----~~l~l~~~~~~~~~~~~~~~~~~~g   79 (161)
T 3oa4_A            4 EKSNKLDHIGIAVTSIKDVLPFYVGSLKLKLLGMEDLPSQGVKIAFLEIGE----SKIELLEPLSEESPIAKFIQKRGEG   79 (161)
T ss_dssp             -CCCEEEEEEEECSCHHHHHHHHHHTSCCEEEEEEEEGGGTEEEEEEEETT----EEEEEEEESSTTSHHHHHHHHHCSE
T ss_pred             cccCcCCEEEEEECCHHHHHHHHHHccCCeEeeeeccCCCCeEEEEEeCCC----eEEEEEeECCCCChHHHHhhcCCCC
Confidence            357899999999999999999999999999988766555556777777653    2344443322211 1     23568


Q ss_pred             ceEEEEEeCCHHHHHHHHHHcCCeeecC-CeecCCCceEEEEE--ECCCCCEEEEEeCCCC
Q 022818           93 FGHFAIATEDVYKLVENIRAKGGNVTRE-PGPLKGGTTHIAFV--KDPDGYIFELIQRGPT  150 (291)
Q Consensus        93 ~~~i~~~v~d~~~~~~~l~~~G~~~~~~-~~~~~~g~~~~~~~--~Dp~G~~iel~~~~~~  150 (291)
                      +.|++|.|+|+++++++|+++|+++..+ |....+|.. ++|+  +||+||+|||++..+.
T Consensus        80 ~~Hiaf~V~Did~~~~~l~~~G~~~~~~~~~~~~~g~~-~~f~~~~DPdG~~iEl~~~~~~  139 (161)
T 3oa4_A           80 IHHIAIGVKSIEERIQEVKENGVQMINDEPVPGARGAQ-VAFLHPRSARGVLYEFCEKKEQ  139 (161)
T ss_dssp             EEEEEEECSCHHHHHHHHHHTTCCBSCSSCEECGGGCE-EEEBCGGGTTTCCEEEEECCCC
T ss_pred             eEEEEEEECCHHHHHHHHHHCCCEecccCcccCCCCcE-EEEEeccCCCeEEEEEEecCCc
Confidence            9999999999999999999999998776 666555554 3666  4999999999998754

>3l7t_A SMU.1112C, putative uncharacterized protein; metal binding protein; 1.80A {Streptococcus mutans}

Probab=99.80  E-value=9.8e-19  Score=129.27  Aligned_cols=120  Identities=24%  Similarity=0.324  Sum_probs=91.7

Q ss_pred             CCceEEEeeeCChhhhHHHHHHhcCCeeeeeeccCCccceEEEeccccCCceeEEEEeee-------cCcce---ee-cC
Q 022818          152 EPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYN-------YGVTE---YT-KG  220 (291)
Q Consensus       152 ~~~~~v~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~-------~~~~~---~~-~~  220 (291)
                      .++.|+.|.|+|++++.+||+++|||++......++.....+++..+    ...+++..+       .....   .+ .+
T Consensus         4 ~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~----~~~l~l~~~~~~~~~~~~~~~~~~~~~~~   79 (134)
T 3l7t_A            4 KAVHHVALIVSDYDKSYEFYVNQLGFEVIRENHRPKRHDYKLDLKCG----DIELEIFGNKLTDSNYCAPPERISWPREA   79 (134)
T ss_dssp             CEEEEEEEECSCHHHHHHHHHHTSCCEEEEEEEETTTTEEEEEEEET----TEEEEEEECCTTSTTCCCCCCCCCSSSCC
T ss_pred             eeEeEEEEEeCCHHHHHHHHHHhcCCEEEEEeecCCCcceEEEEecC----CeEEEEEecccccccccCCccccCCCCCC
Confidence            46899999999999999999999999988776554443344555533    246666552       11111   11 44


Q ss_pred             cceeEEEEEecchHHhHHHHHHHHHHhCCeeecCCccCCCCCceEEEEECCCCceEEEee
Q 022818          221 NAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVD  280 (291)
Q Consensus       221 ~~~~hi~~~v~di~~~~~~l~~~~~~~G~~~~~~~~~~~~~~~~~~~~~DpdG~~iel~~  280 (291)
                      .+..|++|.|+|+++++++|    +++|+++...|...++ +.+.+||+|||||.|||+|
T Consensus        80 ~g~~~~~~~v~d~~~~~~~l----~~~G~~~~~~~~~~~~-g~~~~~~~DPdG~~iel~e  134 (134)
T 3l7t_A           80 CGLRHLAFYVEDVEASRQEL----IALGIRVEEVRYDDYT-GKKMAFFFDPDGLPLELHE  134 (134)
T ss_dssp             SEEEEEEEECSCHHHHHHHH----HHHTCCCCCCEECTTS-CCEEEEEECTTCCEEEEEC
T ss_pred             CCeEEEEEEECCHHHHHHHH----HhCCCcccceeccCCC-ceEEEEEECCCCCEEEEeC
Confidence            58889999999999999999    9999998877665554 4589999999999999986

>3vw9_A Lactoylglutathione lyase; glyoxalase, lyase-lyase inhibitor complex; HET: EPE HPJ; 1.47A {Homo sapiens} PDB: 1qip_A* 1fro_A* 1qin_A* 1bh5_A* 2za0_A*

Probab=99.80  E-value=2e-18  Score=135.68  Aligned_cols=130  Identities=34%  Similarity=0.610  Sum_probs=99.7

Q ss_pred             CCCcceeeEEEEEEeCCHHHHHHHHHhhcCCEEEEEeecCCCceeEEEEecCCCCc---------------ceEEEeeec
Q 022818           17 PKKDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQS---------------HFVVELTYN   81 (291)
Q Consensus        17 ~~~~~~~i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~l~~~~~   81 (291)
                      +.....+|+|+.|.|+|++++++||+++|||++..+...+++.+..+++..++...               ...+++...
T Consensus        28 ~~~~~~~l~Hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~  107 (187)
T 3vw9_A           28 PSTKDFLLQQTMLRVKDPKKSLDFYTRVLGMTLIQKCDFPIMKFSLYFLAYEDKNDIPKEKDEKIAWALSRKATLELTHN  107 (187)
T ss_dssp             GGGTTCEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEETTTTEEEEEEESCCGGGSCSSHHHHHHHHTTCSSEEEEEEE
T ss_pred             CccceeEEEEEEEEeCCHHHHHHHHHHhcCcEEeeccccCCCceeEEEecCCCcccccccccchhhhcccCCceEEEEEe
Confidence            34557899999999999999999999999999998777667777788887654310               134555332


Q ss_pred             CCC-----CcccC----CCCceEEEEEeCCHHHHHHHHHHcCCeeecCCeecCCCceEEEEEECCCCCEEEEEeCC
Q 022818           82 YGV-----TSYDI----GTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRG  148 (291)
Q Consensus        82 ~~~-----~~~~~----g~~~~~i~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~Dp~G~~iel~~~~  148 (291)
                      ...     ..+..    ..++.|++|.|+|+++++++|+++|+++...+....++.  ++||+||+||+|||++..
T Consensus       108 ~~~~~~~~~~~~~g~~~~~g~~hl~f~v~dv~~~~~~l~~~G~~~~~~~~~~~~~~--~~~~~DPdG~~iel~~~~  181 (187)
T 3vw9_A          108 WGTEDDETQSYHNGNSDPRGFGHIGIAVPDVYSACKRFEELGVKFVKKPDDGKMKG--LAFIQDPDGYWIEILNPN  181 (187)
T ss_dssp             TTGGGCTTCCCCCSSSSSCBEEEEEEECSCHHHHHHHHHHTTCCEEECTTSSSSTT--CEEEECTTCCEEEEECGG
T ss_pred             cCCCCCCccccccCCCCCCceeEEEEEECCHHHHHHHHHHCCCeEeeCCccCCcce--EEEEECCCCCEEEEEEcc
Confidence            211     11112    237889999999999999999999999988877666654  378999999999999864

>3hdp_A Glyoxalase-I; glutathione,lyase, methylglyoxal,11003P,PSI2, structural GENOMIC,NYSGXRC., structural genomics; 2.06A {Clostridium acetobutylicum} PDB: 2qh0_A

Probab=99.80  E-value=4e-19  Score=131.60  Aligned_cols=122  Identities=16%  Similarity=0.158  Sum_probs=90.7

Q ss_pred             CCCceEEEeeeCChhhhHHHHHHhcCCeeeeee-ccCCccceEEEeccccCCceeEEEEeeecCccee-----ecCccee
Q 022818          151 PEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTV-DKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEY-----TKGNAYA  224 (291)
Q Consensus       151 ~~~~~~v~l~v~d~~~~~~fy~~~lG~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~-----~~~~~~~  224 (291)
                      ..++.|++|.|+|++++++||+ +|||++.... ..+..+....++..+    ...+++.........     ..+.++.
T Consensus         5 ~~~i~hv~i~v~Dl~~a~~FY~-~lG~~~~~~~~~~~~~~~~~~~~~~~----~~~l~l~~~~~~~~~~~~~~~~~~g~~   79 (133)
T 3hdp_A            5 SLKVHHIGYAVKNIDSALKKFK-RLGYVEESEVVRDEVRKVYIQFVING----GYRVELVAPDGEDSPINKTIKKGSTPY   79 (133)
T ss_dssp             CCCEEEEEEECSCHHHHHHHHH-HTTCEECSCCEEETTTTEEEEEEEET----TEEEEEEEESSTTCTHHHHTTTSCEEE
T ss_pred             ceeeCEEEEEECCHHHHHHHHH-HcCCeeecceeccCCcceEEEEEeCC----CEEEEEEecCCCCChHHHHHhcCCceE
Confidence            3679999999999999999999 9999986543 223333455555532    356777664432211     0156888


Q ss_pred             EEEEEecchHHhHHHHHHHHHHhCCeeecCCccC-CCCCceEEEEECCCCceEEEeec
Q 022818          225 QVAISTDDVYKSAEVVNLVTQELGGKITRQPGSI-PGLNTKITSFVDPDGWKTVLVDN  281 (291)
Q Consensus       225 hi~~~v~di~~~~~~l~~~~~~~G~~~~~~~~~~-~~~~~~~~~~~DpdG~~iel~~~  281 (291)
                      |++|.|+|+++++++|    +++|+++..+|... ..++.+++|++|||||+|||+|+
T Consensus        80 hiaf~v~di~~~~~~l----~~~G~~~~~~p~~~~~~~g~~~~~~~dPdG~~iEl~e~  133 (133)
T 3hdp_A           80 HICYEVEDIQKSIEEM----SQIGYTLFKKAEIAPAIDNRKVAFLFSTDIGLIELLEK  133 (133)
T ss_dssp             EEEEEESCHHHHHHHH----TTTTEEEEEEEEEEGGGTTEEEEEEEETTTEEEEEEEC
T ss_pred             EEEEEcCCHHHHHHHH----HHcCCccccCCeecccCCCceEEEEECCCceEEEEecC
Confidence            9999999999999999    99999988765332 12245889999999999999984

>3gm5_A Lactoylglutathione lyase and related lyases; sheet-helix-sheet-sheet-sheet motif, isomerase; HET: CIT; 2.00A {Thermoanaerobacter tengcongensis}

Probab=99.80  E-value=3.4e-19  Score=136.35  Aligned_cols=132  Identities=22%  Similarity=0.326  Sum_probs=96.0

Q ss_pred             ccccccCCCCCcceeeEEEEEEeCCHHHHHHHHHhhcCCEEEEEeecC--------------CCceeEEEEecCCCCcce
Q 022818            9 ANAELLEWPKKDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVP--------------EEKYSNAFLGFGPEQSHF   74 (291)
Q Consensus         9 ~~~~~~~~~~~~~~~i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~   74 (291)
                      ...+..+.++.++++|+||+|.|+|++++++||+++|||++..+...+              +.....+++..++    .
T Consensus         5 ~~~~~~~~~~~~~~~i~Hv~i~V~Dle~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~g~----~   80 (159)
T 3gm5_A            5 HHHHSMSKNILDMRNTVQIGIVVRDIEESLQNYAEFFGVEKPQWFWTDDYSKAHTKFNGRPTKARAKLAFFELGP----L   80 (159)
T ss_dssp             ----CCCSSCCCGGGCEEEEEECSCHHHHHHHHHHHTTCCCCCCEECCCHHHHCCEETTEECCCCEEEEEEEETT----E
T ss_pred             cccccccccccccccccEEEEEeCCHHHHHHHHHHhhCCCCceEEecCCcccccceeecccccceEEEEEEecCC----E
Confidence            345566667788999999999999999999999999999976543332              1345666676553    2


Q ss_pred             EEEeeecCCCCc-c-----cCCCCceEEEEEeCCHHHHHHHHHHcCCeeecCCeecCCCceEEEEEECCC--CCEEEEEe
Q 022818           75 VVELTYNYGVTS-Y-----DIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPD--GYIFELIQ  146 (291)
Q Consensus        75 ~l~~~~~~~~~~-~-----~~g~~~~~i~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~Dp~--G~~iel~~  146 (291)
                      .+++........ .     ..+.|++|+||.|+|+++++++|+++|+++...+. . +| .+++|+.|||  |++|||++
T Consensus        81 ~leL~~~~~~~~~~~~~l~~~~~g~~Hiaf~v~di~~~~~~l~~~G~~~~~~~~-~-~g-~~~~~~~dpd~~G~~iEl~e  157 (159)
T 3gm5_A           81 QLELIEPDENPSTWREFLDKNGEGIHHIAFVVKDMDRKVEELYRKGMKVIQKGD-F-EG-GRYAYIDTLRALKVMIELLE  157 (159)
T ss_dssp             EEEEEEECSSSCHHHHHHHHHCSEEEEEEEECSCHHHHHHHHHHTTCCEEEEEE-E-TT-EEEEEESCHHHHSSEEEEEE
T ss_pred             EEEEEEECCCCChhHHHhhcCCceEEEEEEEcCCHHHHHHHHHHCCCcEeeccc-c-CC-eeEEEEeccccCcEEEEEEe
Confidence            344444322211 1     13668999999999999999999999999876543 2 23 4568999999  99999998


Q ss_pred             C
Q 022818          147 R  147 (291)
Q Consensus       147 ~  147 (291)
                      .
T Consensus       158 ~  158 (159)
T 3gm5_A          158 N  158 (159)
T ss_dssp             E
T ss_pred             c
Confidence            6

>1jc4_A Methylmalonyl-COA epimerase; vicinal oxygen chelate superfamily, isomerase; 2.00A {Propionibacterium freudenreichiisubsp} SCOP: d.32.1.4 PDB: 1jc5_A

Probab=99.80  E-value=1.6e-18  Score=130.65  Aligned_cols=129  Identities=23%  Similarity=0.354  Sum_probs=95.3

Q ss_pred             CcceeeEEEEEEeCCHHHHHHHHHhhcCCEEEEEeecCCCceeEEEEecCCC--CcceEEEeeecCCCC-c-----ccCC
Q 022818           19 KDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPE--QSHFVVELTYNYGVT-S-----YDIG   90 (291)
Q Consensus        19 ~~~~~i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~l~~~~~~~~~-~-----~~~g   90 (291)
                      .|+++|+|+.|.|+|++++++||+++|||++......++.....+++..++.  ..+..+++....... +     ...+
T Consensus         5 ~m~~~~~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~   84 (148)
T 1jc4_A            5 DLFICIDHVAYACPDADEASKYYQETFGWHELHREENPEQGVVEIMMAPAAKLTEHMTQVQVMAPLNDESTVAKWLAKHN   84 (148)
T ss_dssp             CCCSEEEEEEEECSCHHHHHHHHHHHHCCEEEEEEEETTTTEEEEEEESSSSCCTTCCEEEEEEESSTTSHHHHHHHHTT
T ss_pred             CccceeeEEEEEeCCHHHHHHHHHHccCceeeecccCCCCCeEEEEEEcCCCCcCcceEEEEeecCCCCChHHHHHHhCC
Confidence            4689999999999999999999999999999876554444455667776542  011345554432211 1     0133


Q ss_pred             --CCceEEEEEeCCHHHHHHHHHHcCCeee-cCCeecCCCceEEEEE--ECCCCCEEEEEeCC
Q 022818           91 --TGFGHFAIATEDVYKLVENIRAKGGNVT-REPGPLKGGTTHIAFV--KDPDGYIFELIQRG  148 (291)
Q Consensus        91 --~~~~~i~~~v~d~~~~~~~l~~~G~~~~-~~~~~~~~g~~~~~~~--~Dp~G~~iel~~~~  148 (291)
                        .+..|++|.|+|+++++++|+++|+++. ..|....+|.. .+++  +||+||+|||++..
T Consensus        85 ~~~g~~h~~~~v~d~~~~~~~l~~~G~~~~~~~p~~~~~g~~-~~~~~~~DPdG~~iel~~~~  146 (148)
T 1jc4_A           85 GRAGLHHMAWRVDDIDAVSATLRERGVQLLYDEPKLGTGGNR-INFMHPKSGKGVLIELTQYP  146 (148)
T ss_dssp             TCCEEEEEEEECSCHHHHHHHHHHHTCCBSCSSCEECSSSCE-EEEBCGGGGTTSCEEEEECC
T ss_pred             CCCceEEEEEECCCHHHHHHHHHHCCCeecCcCcccCCCceE-EEEEeecCCCcEEEEEEecC
Confidence              5788999999999999999999999987 45665556544 3666  89999999999864

>3kol_A Oxidoreductase, glyoxalase/bleomycin resistance protein/dioxygenase; metal ION binding, NYSGXRC, PSI2, structural genomics; 1.90A {Nostoc punctiforme pcc 73102}

Probab=99.80  E-value=8.4e-19  Score=133.32  Aligned_cols=130  Identities=18%  Similarity=0.202  Sum_probs=94.1

Q ss_pred             CCCCCcceeeEEEEEEeCCHHHHHHHHHhhcCCEEEEEeecCC------CceeEEEEecCCCCcceEEEeeecCCCC---
Q 022818           15 EWPKKDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPE------EKYSNAFLGFGPEQSHFVVELTYNYGVT---   85 (291)
Q Consensus        15 ~~~~~~~~~i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~l~~~~~~~~~---   85 (291)
                      ..++.++++|+||.|.|+|++++++||+++|||++......+.      ..-...++..++.   ..+.+.......   
T Consensus        11 ~~~~~~~~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~l~l~~~~~~~~~~   87 (156)
T 3kol_A           11 VLAPGNLRKVHHIALNVQDMQASRYFYGTILGLHELTDDEVPATLTELVASGKVANFITPDG---TILDLFGEPELSPPD   87 (156)
T ss_dssp             CCCTTSSCCCCEEEEEESCHHHHHHHHTTTSCCEECCTTTSCTTTHHHHHTTSEEEEECTTS---CEEEEEECTTCCCSS
T ss_pred             ccCccccceEeEEEEEeCCHHHHHHHHHhhcCCEEEeecccCcchhcccCCCcEEEEEeCCC---CEEEEEecCCCCcCC
Confidence            3455789999999999999999999999999999876322111      0012355555432   234444332211   


Q ss_pred             --cccCCCCceEEEEEeC--CHHHHHHHHHHcCCeeecCCeecCCCceEEEEEECCCCCEEEEEeCCC
Q 022818           86 --SYDIGTGFGHFAIATE--DVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRGP  149 (291)
Q Consensus        86 --~~~~g~~~~~i~~~v~--d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~Dp~G~~iel~~~~~  149 (291)
                        +.....+..|++|.|+  |+++++++|+++|+++...|....+|.  .+||+||+||.|||++...
T Consensus        88 ~~~~~~~~~~~h~~~~v~~~d~~~~~~~l~~~G~~~~~~~~~~~~g~--~~~~~DPdG~~iel~~~~~  153 (156)
T 3kol_A           88 PNPEKTFTRAYHLAFDIDPQLFDRAVTVIGENKIAIAHGPVTRPTGR--GVYFYDPDGFMIEIRCDPE  153 (156)
T ss_dssp             SSTTCCCSSCCEEEEECCGGGHHHHHHHHHHTTCCEEEEEEEC-CCE--EEEEECTTSCEEEEEECCC
T ss_pred             CCCCCCCCceEEEEEEecHHHHHHHHHHHHHCCCccccCceecCCcc--EEEEECCCCCEEEEEecCC
Confidence              1123457899999998  999999999999999887777776654  5899999999999998753

>3huh_A Virulence protein STM3117; structural genomics, nysgrc, target 13955A1BCT15P1, dioxygen virulence, PSI-2, protein structure initiative; 1.50A {Salmonella enterica subsp} PDB: 3hnq_A

Probab=99.80  E-value=1.2e-18  Score=132.16  Aligned_cols=126  Identities=23%  Similarity=0.331  Sum_probs=88.5

Q ss_pred             CCCCCcceeeEEEEEEeCCHHHHHHHHHhhcCCEEEEEeecCCCceeEEEEecCCCCcceEEEeeecCC---CCcccCCC
Q 022818           15 EWPKKDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYG---VTSYDIGT   91 (291)
Q Consensus        15 ~~~~~~~~~i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~---~~~~~~g~   91 (291)
                      +..++++.+|+||.|.|+|++++++||+++|||++....   +   ...++..++.    .+.+.....   ........
T Consensus        15 ~~~~m~i~~l~hv~l~v~D~~~a~~FY~~vLG~~~~~~~---~---~~~~l~~~~~----~l~l~~~~~~~~~~~~~~~~   84 (152)
T 3huh_A           15 ESIQMIIDRIDHLVLTVSDISTTIRFYEEVLGFSAVTFK---Q---NRKALIFGAQ----KINLHQQEMEFEPKASRPTP   84 (152)
T ss_dssp             -----CEEEEEEEEEEESCHHHHHHHHHHTTCCEEEEET---T---TEEEEEETTE----EEEEEETTBCCSSCCSSCCT
T ss_pred             hcCCcccceeeEEEEEeCCHHHHHHHHHhcCCCEEEEcc---C---CeEEEEeCCe----EEEEeccCCcCCCcCcCCCC
Confidence            444567899999999999999999999999999998762   2   1344555432    233332211   11122345


Q ss_pred             CceEEEEEeC-CHHHHHHHHHHcCCeeecCCeecCCC--ceEEEEEECCCCCEEEEEeCCCC
Q 022818           92 GFGHFAIATE-DVYKLVENIRAKGGNVTREPGPLKGG--TTHIAFVKDPDGYIFELIQRGPT  150 (291)
Q Consensus        92 ~~~~i~~~v~-d~~~~~~~l~~~G~~~~~~~~~~~~g--~~~~~~~~Dp~G~~iel~~~~~~  150 (291)
                      +..|++|.+. |+++++++|+++|+++...|...+++  ..+.++|+||+||+||+++..+.
T Consensus        85 g~~hi~f~~~~dl~~~~~~l~~~G~~~~~~p~~~~~~~g~~~~~~~~DPdG~~iEl~~~~~~  146 (152)
T 3huh_A           85 GSADLCFITSTPINDVVSEILQAGISIVEGPVERTGATGEIMSIYIRDPDGNLIEISQYVEG  146 (152)
T ss_dssp             TCCEEEEEESSCHHHHHHHHHHTTCCCSEEEEEEEETTEEEEEEEEECTTCCEEEEEEC---
T ss_pred             CccEEEEEecCCHHHHHHHHHHCCCeEecCCccccCCCCcEEEEEEECCCCCEEEEEecccC
Confidence            7889999987 99999999999999988776655443  23568899999999999988643

>2rk0_A Glyoxalase/bleomycin resistance protein/dioxygena; 11002Z, glyoxylase, dioxygenas PSI-II; 2.04A {Frankia SP}

Probab=99.79  E-value=3.1e-18  Score=127.43  Aligned_cols=123  Identities=22%  Similarity=0.307  Sum_probs=90.5

Q ss_pred             CcceeeEEEEEEeCCHHHHHHHHHhhcCCEEEEEeecCCCceeEEEEecCCCCcceEEEeeecCCC--Ccc-cCCCCceE
Q 022818           19 KDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGV--TSY-DIGTGFGH   95 (291)
Q Consensus        19 ~~~~~i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~--~~~-~~g~~~~~   95 (291)
                      +++++|+|+.|.|+|++++.+||+++|||++.......++.+..+++. +  .  ..+.+......  ... ..+.+..|
T Consensus         1 M~i~~i~hv~l~v~Dl~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~-~--~--~~l~l~~~~~~~~~~~~~~~~g~~h   75 (136)
T 2rk0_A            1 MSLSGVSHVSLTVRDLDISCRWYTEILDWKELVRGRGDTTSFAHGVLP-G--G--LSIVLREHDGGGTDLFDETRPGLDH   75 (136)
T ss_dssp             -CEEEEEEEEEECSCHHHHHHHHHHHHCCEEEEEEECSSEEEEEEECT-T--S--CEEEEEEETTCSSSCCCTTSSEEEE
T ss_pred             CCCCcccEEEEEeCCHHHHHHHHHHhcCCEEEeeccCCCCceEEEEEc-C--C--CEEEEEeCCCCcccCCCCCCCCcce
Confidence            468999999999999999999999999999987655333334445454 2  2  23444433221  111 13457789


Q ss_pred             EEEEe---CCHHHHHHHHHHcCCeeecCCeecCCCceEEEEEECCCCCEEEEEeCCC
Q 022818           96 FAIAT---EDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRGP  149 (291)
Q Consensus        96 i~~~v---~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~Dp~G~~iel~~~~~  149 (291)
                      ++|.|   +|+++++++|+++|+++.. +...++|  +.++|+||+||+|||++..+
T Consensus        76 ~~f~v~~~~d~~~~~~~l~~~G~~~~~-~~~~~~g--~~~~~~DPdG~~iel~~~~~  129 (136)
T 2rk0_A           76 LSFSVESMTDLDVLEERLAKAGAAFTP-TQELPFG--WILAFRDADNIALEAMLGRE  129 (136)
T ss_dssp             EEEEESSHHHHHHHHHHHHHHTCCBCC-CEEETTE--EEEEEECTTCCEEEEEEECT
T ss_pred             EEEEeCCHHHHHHHHHHHHHCCCcccC-ccccCCc--eEEEEECCCCCEEEEEEcCC
Confidence            99999   8999999999999999764 4455555  45899999999999998764

>3ey7_A Biphenyl-2,3-DIOL 1,2-dioxygenase III-related protein; integron cassette protein mobIle metagenome structural genomics, oxidoreductase, PSI-2; HET: MSE; 1.60A {Vibrio cholerae} PDB: 3ey8_A*

Probab=99.79  E-value=2.2e-18  Score=127.33  Aligned_cols=121  Identities=20%  Similarity=0.342  Sum_probs=89.7

Q ss_pred             CcceeeEEEEEEeCCHHHHHHHHHhhcCCEEEEEeecCCCceeEEEEecCCCCcceEEEeeecCC---CCcccCCCCceE
Q 022818           19 KDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYG---VTSYDIGTGFGH   95 (291)
Q Consensus        19 ~~~~~i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~---~~~~~~g~~~~~   95 (291)
                      +++.+|+|+.|.|+|++++.+||+++|||++....   +   ...++..++  .  .+.+.....   ......+.+..|
T Consensus         6 m~~~~i~hi~l~v~D~~~a~~FY~~~lG~~~~~~~---~---~~~~~~~~~--~--~~~l~~~~~~~~~~~~~~~~~~~~   75 (133)
T 3ey7_A            6 MKISHLDHLVLTVADIPTTTNFYEKVLGMKAVSFG---A---GRIALEFGH--Q--KINLHQLGNEFEPKAQNVRVGSAD   75 (133)
T ss_dssp             CCCCEEEEEEEEESCHHHHHHHHHHHHCCEEEEET---T---TEEEEEETT--E--EEEEEETTSCCSSCCTTCCTTCCE
T ss_pred             eEecccCEEEEEECCHHHHHHHHHHccCceEEEec---C---CeEEEEcCC--E--EEEEEcCCCCccccCCCCCCCccE
Confidence            56889999999999999999999999999998653   1   134455543  2  233332211   111224557899


Q ss_pred             EEEEeCC-HHHHHHHHHHcCCeeecCCeecCCC--ceEEEEEECCCCCEEEEEeCCC
Q 022818           96 FAIATED-VYKLVENIRAKGGNVTREPGPLKGG--TTHIAFVKDPDGYIFELIQRGP  149 (291)
Q Consensus        96 i~~~v~d-~~~~~~~l~~~G~~~~~~~~~~~~g--~~~~~~~~Dp~G~~iel~~~~~  149 (291)
                      ++|.|+| +++++++|+++|+++...|...+++  ..+.++++||+||.|||++..+
T Consensus        76 ~~~~v~dd~~~~~~~l~~~G~~~~~~~~~~~~~~g~~~~~~~~DPdG~~iel~~~~~  132 (133)
T 3ey7_A           76 LCFITDTVLSDAMKHVEDQGVTIMEGPVKRTGAQGAITSFYFRDPDGNLIEVSTYSN  132 (133)
T ss_dssp             EEEECSSCHHHHHHHHHHTTCCCCEEEEEEEETTEEEEEEEEECTTCCEEEEEESCC
T ss_pred             EEEEeCcHHHHHHHHHHHCCCccccCCccccCCCCCeEEEEEECCCCCEEEEEecCC
Confidence            9999997 9999999999999988776555433  2356899999999999998753

>3ghj_A Putative integron gene cassette protein; integron cassette protein, mobIle metagenome, structural genomics, PSI-2; 1.47A {Uncultured bacterium}

Probab=99.78  E-value=4e-18  Score=127.72  Aligned_cols=116  Identities=20%  Similarity=0.261  Sum_probs=85.5

Q ss_pred             CCcceeeEEEEEEeCCHHHHHHHHHhhcCCEEEEEeecCCCceeEEEEecCCCCcceEEEeeecCCCCcccCCCCceEEE
Q 022818           18 KKDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFA   97 (291)
Q Consensus        18 ~~~~~~i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~~~~i~   97 (291)
                      ++++.+|+||.|.|+|++++.+||+++|||++.....  +.  ...++..++.  ...+.+....      ...+..|++
T Consensus        23 ~m~i~~i~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~~--~~--~~~~~~~~~~--~~~l~l~~~~------~~~~~~h~~   90 (141)
T 3ghj_A           23 PMNIKGLFEVAVKVKNLEKSSQFYTEILGFEAGLLDS--AR--RWNFLWVSGR--AGMVVLQEEK------ENWQQQHFS   90 (141)
T ss_dssp             ---CCCCCEEEEEESCHHHHHHHHHHTSCCEEEEEET--TT--TEEEEEETTT--TEEEEEEECC------SSCCCCEEE
T ss_pred             ceeeceecEEEEEeCCHHHHHHHHHHhcCCEEEEecC--CC--cEEEEEecCC--CcEEEEeccC------CCCCCceEE
Confidence            4568999999999999999999999999999987643  22  2344554432  3345554431      123678999


Q ss_pred             EEeC--CHHHHHHHHHHcCCeeecCCeecCCCceEEEEEECCCCCEEEEEe
Q 022818           98 IATE--DVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQ  146 (291)
Q Consensus        98 ~~v~--d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~Dp~G~~iel~~  146 (291)
                      |.|+  |+++++++|+++|+++.. |....++..+.++|+||+||.|||+.
T Consensus        91 ~~v~~~dld~~~~~l~~~G~~~~~-~~~~~~~~~~~~~~~DPdG~~iel~~  140 (141)
T 3ghj_A           91 FRVEKSEIEPLKKALESKGVSVHG-PVNQEWMQAVSLYFADPNGHALEFTA  140 (141)
T ss_dssp             EEECGGGHHHHHHHHHHTTCCCEE-EEEEGGGTEEEEEEECTTCCEEEEEE
T ss_pred             EEEeHHHHHHHHHHHHHCCCeEeC-CcccCCCCceEEEEECCCCCEEEEEE
Confidence            9997  999999999999999874 34444444456999999999999985

>3oa4_A Glyoxalase, BH1468 protein; structural genomics, protein structure initiative, glyoxalas PSI-biology, lyase; 1.94A {Bacillus halodurans}

Probab=99.78  E-value=1e-18  Score=133.94  Aligned_cols=125  Identities=18%  Similarity=0.264  Sum_probs=95.5

Q ss_pred             CCCceEEEeeeCChhhhHHHHHHhcCCeeeeeeccCCccceEEEeccccCCceeEEEEeeecCcce------eecCccee
Q 022818          151 PEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTE------YTKGNAYA  224 (291)
Q Consensus       151 ~~~~~~v~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~------~~~~~~~~  224 (291)
                      ..++.|+.|.|+|++++++||+++|||++......++.+..+.++..+    ...+++........      ...+.++.
T Consensus         6 ~~~i~Hv~l~V~Dl~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~g----~~~l~l~~~~~~~~~~~~~~~~~~~g~~   81 (161)
T 3oa4_A            6 SNKLDHIGIAVTSIKDVLPFYVGSLKLKLLGMEDLPSQGVKIAFLEIG----ESKIELLEPLSEESPIAKFIQKRGEGIH   81 (161)
T ss_dssp             CCEEEEEEEECSCHHHHHHHHHHTSCCEEEEEEEEGGGTEEEEEEEET----TEEEEEEEESSTTSHHHHHHHHHCSEEE
T ss_pred             cCcCCEEEEEECCHHHHHHHHHHccCCeEeeeeccCCCCeEEEEEeCC----CeEEEEEeECCCCChHHHHhhcCCCCeE
Confidence            457999999999999999999999999988765544445566666643    35667765543321      12356899


Q ss_pred             EEEEEecchHHhHHHHHHHHHHhCCeeecC-CccCCCCCceEEEE--ECCCCceEEEeechhh
Q 022818          225 QVAISTDDVYKSAEVVNLVTQELGGKITRQ-PGSIPGLNTKITSF--VDPDGWKTVLVDNEDF  284 (291)
Q Consensus       225 hi~~~v~di~~~~~~l~~~~~~~G~~~~~~-~~~~~~~~~~~~~~--~DpdG~~iel~~~~~~  284 (291)
                      |++|.|+|+++++++|    +++|+++..+ |...++ +.+++|+  +|||||+|||++..+.
T Consensus        82 Hiaf~V~Did~~~~~l----~~~G~~~~~~~~~~~~~-g~~~~f~~~~DPdG~~iEl~~~~~~  139 (161)
T 3oa4_A           82 HIAIGVKSIEERIQEV----KENGVQMINDEPVPGAR-GAQVAFLHPRSARGVLYEFCEKKEQ  139 (161)
T ss_dssp             EEEEECSCHHHHHHHH----HHTTCCBSCSSCEECGG-GCEEEEBCGGGTTTCCEEEEECCCC
T ss_pred             EEEEEECCHHHHHHHH----HHCCCEecccCcccCCC-CcEEEEEeccCCCeEEEEEEecCCc
Confidence            9999999999999999    9999998776 444333 3467777  4999999999998653

>2za0_A Glyoxalase I; lyase, lactoylglutathione lyase, methyl- gerfelin; HET: MGI; 1.70A {Mus musculus} PDB: 1qip_A* 1fro_A* 1qin_A* 1bh5_A*

Probab=99.77  E-value=1.9e-17  Score=129.72  Aligned_cols=131  Identities=32%  Similarity=0.578  Sum_probs=94.8

Q ss_pred             CCcceeeEEEEEEeCCHHHHHHHHHhhcCCEEEEEeecCCCceeEEEEecCCC---------------CcceEEEeeecC
Q 022818           18 KKDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPE---------------QSHFVVELTYNY   82 (291)
Q Consensus        18 ~~~~~~i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~l~~~~~~   82 (291)
                      ...+++++|+.|.|+|++++++||+++|||++......++..+..+++..++.               .....+++....
T Consensus        26 ~~~~~~i~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~L~~~~  105 (184)
T 2za0_A           26 STKDFLLQQTMLRIKDPKKSLDFYTRVLGLTLLQKLDFPAMKFSLYFLAYEDKNDIPKDKSEKTAWTFSRKATLELTHNW  105 (184)
T ss_dssp             GGTTCEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEEGGGTEEEEEEESCCGGGSCSSHHHHHHHHTTSSSEEEEEEET
T ss_pred             CccceeEEEEEEEeCCHHHHHHHHHHhcCCEEEEeccCCCCCceeEEecccccccCCcccchheeeecCCCceEEEEecC
Confidence            34588999999999999999999999999999876544444455556654320               012344444321


Q ss_pred             C----C-Cccc----CCCCceEEEEEeCCHHHHHHHHHHcCCeeecCCeecCCCceEEEEEECCCCCEEEEEeCCCC
Q 022818           83 G----V-TSYD----IGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRGPT  150 (291)
Q Consensus        83 ~----~-~~~~----~g~~~~~i~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~Dp~G~~iel~~~~~~  150 (291)
                      .    . ..+.    ...+..|++|.|+|+++++++|+++|+++...|...+++.  ++||+||+||+|||++....
T Consensus       106 ~~~~~~~~~~~~~~~~~~g~~hi~f~v~dvd~~~~~l~~~G~~~~~~p~~~~~~~--~~~~~DPdG~~iel~~~~~~  180 (184)
T 2za0_A          106 GTEDDETQSYHNGNSDPRGFGHIGIAVPDVYSACKRFEELGVKFVKKPDDGKMKG--LAFIQDPDGYWIEILNPNKI  180 (184)
T ss_dssp             TGGGCTTCCCCCSSSSSCCEEEEEEECSCHHHHHHHHHHTTCCEEECTTSSSSTT--CEEEECTTCCEEEEECTTTG
T ss_pred             CCCCCcccccccCCCCCCCeeEEEEEeCCHHHHHHHHHHCCCeeecCCcCCCcee--EEEEECCCCCEEEEEecCcc
Confidence            1    1 1111    1247789999999999999999999999888776655443  38899999999999987543

>2p25_A Glyoxalase family protein; structural genomics, MCSG, PSI-2, protein struct initiative, midwest center for structural genomics, oxidore; 1.70A {Enterococcus faecalis}

Probab=99.77  E-value=2.9e-18  Score=125.44  Aligned_cols=119  Identities=20%  Similarity=0.298  Sum_probs=86.7

Q ss_pred             CCceEEEeeeCChhhhHHHHHHhcCCeeeeeeccCC-ccceEEEeccccCCceeEEEEeeecCcce---eecCcceeEEE
Q 022818          152 EPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPE-YKYTLAMLGYAEEDQTTVLELTYNYGVTE---YTKGNAYAQVA  227 (291)
Q Consensus       152 ~~~~~v~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~l~~~~~~~~---~~~~~~~~hi~  227 (291)
                      .++.|+.|.|+|++++.+||+++|||++......++ ..+. +++..++    ..+++........   ...+++..|++
T Consensus         4 ~~i~hi~l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~-~~~~~~~----~~l~l~~~~~~~~~~~~~~~~g~~~~~   78 (126)
T 2p25_A            4 KEIHHVAINASNYQATKNFYVEKLGFEVLRENHRPEKNDIK-LDLKLGS----QELEIFISDQFPARPSYPEALGLRHLA   78 (126)
T ss_dssp             SCCCCEEEEESCHHHHHHHHTTTTCCEEEEEEEEGGGTEEE-EEEEETT----EEEEEEECTTCCCCCCSSCCSSCCCEE
T ss_pred             cccceEEEEeCCHHHHHHHHHHhcCCEEEeeccCCCCcceE-EEEecCC----eEEEEEeccCCCCCCCCCCCccceEEE
Confidence            468999999999999999999999999876533222 2222 2233222    2566654322111   12345778999


Q ss_pred             EEecchHHhHHHHHHHHHHhCCeeecCCccCCCCCceEEEEECCCCceEEEee
Q 022818          228 ISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVD  280 (291)
Q Consensus       228 ~~v~di~~~~~~l~~~~~~~G~~~~~~~~~~~~~~~~~~~~~DpdG~~iel~~  280 (291)
                      |.|+|+++++++|    +++|+++...|...++ +.+.+||+|||||.|||+|
T Consensus        79 ~~v~d~~~~~~~l----~~~G~~~~~~~~~~~~-g~~~~~~~DPdG~~iel~e  126 (126)
T 2p25_A           79 FKVEHIEEVIAFL----NEQGIETEPLRVDDFT-GKKMTFFFDPDGLPLELHE  126 (126)
T ss_dssp             EECSCHHHHHHHH----HHTTCCCCCCEECTTT-CCEEEEEECTTCCEEEEEC
T ss_pred             EEeCCHHHHHHHH----HHcCCccccccccCCC-CcEEEEEECCCCCEEEeeC
Confidence            9999999999999    9999998766654444 4588999999999999986

>3gm5_A Lactoylglutathione lyase and related lyases; sheet-helix-sheet-sheet-sheet motif, isomerase; HET: CIT; 2.00A {Thermoanaerobacter tengcongensis}

Probab=99.77  E-value=2.7e-18  Score=131.25  Aligned_cols=120  Identities=16%  Similarity=0.159  Sum_probs=91.7

Q ss_pred             CCCceEEEeeeCChhhhHHHHHHhcCCeeeeeeccC--------------CccceEEEeccccCCceeEEEEeeecCcce
Q 022818          151 PEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKP--------------EYKYTLAMLGYAEEDQTTVLELTYNYGVTE  216 (291)
Q Consensus       151 ~~~~~~v~l~v~d~~~~~~fy~~~lG~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~  216 (291)
                      ..++.|++|.|+|++++++||+++|||++......+              +.+..+.++..+    ...++|....+...
T Consensus        17 ~~~i~Hv~i~V~Dle~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~g----~~~leL~~~~~~~~   92 (159)
T 3gm5_A           17 MRNTVQIGIVVRDIEESLQNYAEFFGVEKPQWFWTDDYSKAHTKFNGRPTKARAKLAFFELG----PLQLELIEPDENPS   92 (159)
T ss_dssp             GGGCEEEEEECSCHHHHHHHHHHHTTCCCCCCEECCCHHHHCCEETTEECCCCEEEEEEEET----TEEEEEEEECSSSC
T ss_pred             cccccEEEEEeCCHHHHHHHHHHhhCCCCceEEecCCcccccceeecccccceEEEEEEecC----CEEEEEEEECCCCC
Confidence            357999999999999999999999999976544322              133455555532    35677766543321


Q ss_pred             -e-----ecCcceeEEEEEecchHHhHHHHHHHHHHhCCeeecCCccCCCCCceEEEEECCC--CceEEEeec
Q 022818          217 -Y-----TKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPD--GWKTVLVDN  281 (291)
Q Consensus       217 -~-----~~~~~~~hi~~~v~di~~~~~~l~~~~~~~G~~~~~~~~~~~~~~~~~~~~~Dpd--G~~iel~~~  281 (291)
                       .     ..+.|+.||+|.|+|+++++++|    +++|+++...+..   .+.+++||+|||  |++|||+|+
T Consensus        93 ~~~~~l~~~~~g~~Hiaf~v~di~~~~~~l----~~~G~~~~~~~~~---~g~~~~~~~dpd~~G~~iEl~e~  158 (159)
T 3gm5_A           93 TWREFLDKNGEGIHHIAFVVKDMDRKVEEL----YRKGMKVIQKGDF---EGGRYAYIDTLRALKVMIELLEN  158 (159)
T ss_dssp             HHHHHHHHHCSEEEEEEEECSCHHHHHHHH----HHTTCCEEEEEEE---TTEEEEEESCHHHHSSEEEEEEE
T ss_pred             hhHHHhhcCCceEEEEEEEcCCHHHHHHHH----HHCCCcEeecccc---CCeeEEEEeccccCcEEEEEEec
Confidence             1     13668999999999999999999    9999998766532   246899999999  999999986

>2za0_A Glyoxalase I; lyase, lactoylglutathione lyase, methyl- gerfelin; HET: MGI; 1.70A {Mus musculus} PDB: 1qip_A* 1fro_A* 1qin_A* 1bh5_A*

Probab=99.76  E-value=9.8e-18  Score=131.36  Aligned_cols=128  Identities=30%  Similarity=0.574  Sum_probs=95.8

Q ss_pred             CCCceEEEeeeCChhhhHHHHHHhcCCeeeeeeccCCccceEEEeccccC---------------CceeEEEEeeecCcc
Q 022818          151 PEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEE---------------DQTTVLELTYNYGVT  215 (291)
Q Consensus       151 ~~~~~~v~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~l~l~~~~~~~  215 (291)
                      ..++.|+.|.|+|++++++||+++|||++......++..+.+++++.+..               ..+..|++.......
T Consensus        29 ~~~i~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~L~~~~~~~  108 (184)
T 2za0_A           29 DFLLQQTMLRIKDPKKSLDFYTRVLGLTLLQKLDFPAMKFSLYFLAYEDKNDIPKDKSEKTAWTFSRKATLELTHNWGTE  108 (184)
T ss_dssp             TCEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEEGGGTEEEEEEESCCGGGSCSSHHHHHHHHTTSSSEEEEEEETTGG
T ss_pred             ceeEEEEEEEeCCHHHHHHHHHHhcCCEEEEeccCCCCCceeEEecccccccCCcccchheeeecCCCceEEEEecCCCC
Confidence            45799999999999999999999999998876544444456666654320               013566775543211


Q ss_pred             -----eee----cCcceeEEEEEecchHHhHHHHHHHHHHhCCeeecCCccCCCCCceEEEEECCCCceEEEeechhh
Q 022818          216 -----EYT----KGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNEDF  284 (291)
Q Consensus       216 -----~~~----~~~~~~hi~~~v~di~~~~~~l~~~~~~~G~~~~~~~~~~~~~~~~~~~~~DpdG~~iel~~~~~~  284 (291)
                           .+.    ...+..|++|.|+|+++++++|    +++|+++..+|...++  .+++||+|||||+|||++....
T Consensus       109 ~~~~~~~~~~~~~~~g~~hi~f~v~dvd~~~~~l----~~~G~~~~~~p~~~~~--~~~~~~~DPdG~~iel~~~~~~  180 (184)
T 2za0_A          109 DDETQSYHNGNSDPRGFGHIGIAVPDVYSACKRF----EELGVKFVKKPDDGKM--KGLAFIQDPDGYWIEILNPNKI  180 (184)
T ss_dssp             GCTTCCCCCSSSSSCCEEEEEEECSCHHHHHHHH----HHTTCCEEECTTSSSS--TTCEEEECTTCCEEEEECTTTG
T ss_pred             CCcccccccCCCCCCCeeEEEEEeCCHHHHHHHH----HHCCCeeecCCcCCCc--eeEEEEECCCCCEEEEEecCcc
Confidence                 011    1247789999999999999999    9999999888776544  4679999999999999997654

>2rk0_A Glyoxalase/bleomycin resistance protein/dioxygena; 11002Z, glyoxylase, dioxygenas PSI-II; 2.04A {Frankia SP}

Probab=99.76  E-value=7.8e-18  Score=125.22  Aligned_cols=119  Identities=19%  Similarity=0.208  Sum_probs=89.4

Q ss_pred             CceEEEeeeCChhhhHHHHHHhcCCeeeeeeccCCccceEEEeccccCCceeEEEEeeecCcc--ee-ecCcceeEEEEE
Q 022818          153 PLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVT--EY-TKGNAYAQVAIS  229 (291)
Q Consensus       153 ~~~~v~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~--~~-~~~~~~~hi~~~  229 (291)
                      ++.|+.|.|+|++++.+||+++|||++.......++.+..+++. +    ...+++....+..  .. ..+++..|++|.
T Consensus         5 ~i~hv~l~v~Dl~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~-~----~~~l~l~~~~~~~~~~~~~~~~g~~h~~f~   79 (136)
T 2rk0_A            5 GVSHVSLTVRDLDISCRWYTEILDWKELVRGRGDTTSFAHGVLP-G----GLSIVLREHDGGGTDLFDETRPGLDHLSFS   79 (136)
T ss_dssp             EEEEEEEECSCHHHHHHHHHHHHCCEEEEEEECSSEEEEEEECT-T----SCEEEEEEETTCSSSCCCTTSSEEEEEEEE
T ss_pred             cccEEEEEeCCHHHHHHHHHHhcCCEEEeeccCCCCceEEEEEc-C----CCEEEEEeCCCCcccCCCCCCCCcceEEEE
Confidence            58899999999999999999999999877655443345555555 2    3566665543321  11 234578899999


Q ss_pred             e---cchHHhHHHHHHHHHHhCCeeecCCccCCCCCceEEEEECCCCceEEEeechh
Q 022818          230 T---DDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNED  283 (291)
Q Consensus       230 v---~di~~~~~~l~~~~~~~G~~~~~~~~~~~~~~~~~~~~~DpdG~~iel~~~~~  283 (291)
                      |   +|+++++++|    +++|+++. +|...++ + +.+||+|||||+|||++..+
T Consensus        80 v~~~~d~~~~~~~l----~~~G~~~~-~~~~~~~-g-~~~~~~DPdG~~iel~~~~~  129 (136)
T 2rk0_A           80 VESMTDLDVLEERL----AKAGAAFT-PTQELPF-G-WILAFRDADNIALEAMLGRE  129 (136)
T ss_dssp             ESSHHHHHHHHHHH----HHHTCCBC-CCEEETT-E-EEEEEECTTCCEEEEEEECT
T ss_pred             eCCHHHHHHHHHHH----HHCCCccc-CccccCC-c-eEEEEECCCCCEEEEEEcCC
Confidence            9   8889999999    99999976 4444444 3 88999999999999998654

>1ss4_A Glyoxalase family protein; structural genomics, PSI, prote structure initiative, midwest center for structural genomic unknown function; HET: CIT GSH; 1.84A {Bacillus cereus} SCOP: d.32.1.6

Probab=99.76  E-value=7e-18  Score=127.83  Aligned_cols=124  Identities=15%  Similarity=0.206  Sum_probs=91.2

Q ss_pred             CCceEEEeeeCChhhhHHHHHHhcCCeeeeeecc-----------CCccceEEEeccccCCceeEEEEeeecCcc-----
Q 022818          152 EPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDK-----------PEYKYTLAMLGYAEEDQTTVLELTYNYGVT-----  215 (291)
Q Consensus       152 ~~~~~v~l~v~d~~~~~~fy~~~lG~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~-----  215 (291)
                      .++.|+.|.|+|++++.+||++ |||++......           ++......++..+++  ...+++.......     
T Consensus        10 ~~i~hv~l~v~D~~~a~~FY~~-lG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g--~~~l~l~~~~~~~~~~~~   86 (153)
T 1ss4_A           10 LRMDNVSIVVESLDNAISFFEE-IGLNLEGRANVEGEWAGRVTGLGSQCVEIAMMVTPDG--HSRIELSRFLTPPTIADH   86 (153)
T ss_dssp             EEEEEEEEECSCHHHHHHHHHH-HTCEEEEEEEECSHHHHHHHSCCSCEEEEEEEECTTS--SCEEEEEEEEESCCCCBC
T ss_pred             cceeeEEEEeCCHHHHHHHHHH-CCCEEEeeccCCcchhheeeCCCCCcEEEEEEECCCC--CcEEEEEEecCCCCcccc
Confidence            4689999999999999999999 99998755331           112334555554332  2455554431111     


Q ss_pred             --eeecCcceeEEEEEecchHHhHHHHHHHHHHhCCeeecCCccCCCCCceEEEEECCCCceEEEeechh
Q 022818          216 --EYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNED  283 (291)
Q Consensus       216 --~~~~~~~~~hi~~~v~di~~~~~~l~~~~~~~G~~~~~~~~~~~~~~~~~~~~~DpdG~~iel~~~~~  283 (291)
                        ....+.+..|++|.|+|+++++++|    +++|+++..+|...++ +.+++||+|||||.|||++...
T Consensus        87 ~~~~~~~~g~~hl~~~v~d~~~~~~~l----~~~G~~~~~~~~~~~~-g~~~~~~~DPdG~~iel~~~~~  151 (153)
T 1ss4_A           87 RTAPVNALGYLRVMFTVEDIDEMVSRL----TKHGAELVGEVVQYEN-SYRLCYIRGVEGILIGLAEELG  151 (153)
T ss_dssp             TTCCSSSBEEEEEEEEESCHHHHHHHH----HHTTCEESSCCEEETT-TEEEEEEECGGGCEEEEEEECC
T ss_pred             cCCCCCCCceEEEEEEeCCHHHHHHHH----HHCCCeecCCCcccCC-ceEEEEEECCCCCEEEEEeccC
Confidence              0123457789999999999999999    9999999888766554 4688999999999999998754

>1jc4_A Methylmalonyl-COA epimerase; vicinal oxygen chelate superfamily, isomerase; 2.00A {Propionibacterium freudenreichiisubsp} SCOP: d.32.1.4 PDB: 1jc5_A

Probab=99.76  E-value=7.3e-18  Score=126.97  Aligned_cols=128  Identities=16%  Similarity=0.207  Sum_probs=92.9

Q ss_pred             CCCceEEEeeeCChhhhHHHHHHhcCCeeeeeeccCCccceEEEeccccC--CceeEEEEeeecCcce------eecC--
Q 022818          151 PEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEE--DQTTVLELTYNYGVTE------YTKG--  220 (291)
Q Consensus       151 ~~~~~~v~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~l~l~~~~~~~~------~~~~--  220 (291)
                      ..++.|+.|.|+|++++++||+++|||++......++.+...+++..+++  ..+..|++........      ...+  
T Consensus         7 ~~~~~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~   86 (148)
T 1jc4_A            7 FICIDHVAYACPDADEASKYYQETFGWHELHREENPEQGVVEIMMAPAAKLTEHMTQVQVMAPLNDESTVAKWLAKHNGR   86 (148)
T ss_dssp             CSEEEEEEEECSCHHHHHHHHHHHHCCEEEEEEEETTTTEEEEEEESSSSCCTTCCEEEEEEESSTTSHHHHHHHHTTTC
T ss_pred             cceeeEEEEEeCCHHHHHHHHHHccCceeeecccCCCCCeEEEEEEcCCCCcCcceEEEEeecCCCCChHHHHHHhCCCC
Confidence            45799999999999999999999999998766543333345556654331  1125677765443211      1133  


Q ss_pred             cceeEEEEEecchHHhHHHHHHHHHHhCCeee-cCCccCCCCCceEEEE--ECCCCceEEEeechh
Q 022818          221 NAYAQVAISTDDVYKSAEVVNLVTQELGGKIT-RQPGSIPGLNTKITSF--VDPDGWKTVLVDNED  283 (291)
Q Consensus       221 ~~~~hi~~~v~di~~~~~~l~~~~~~~G~~~~-~~~~~~~~~~~~~~~~--~DpdG~~iel~~~~~  283 (291)
                      .+..|++|.|+|+++++++|    +++|+++. ..|...++ +.+++|+  +|||||.|||++..+
T Consensus        87 ~g~~h~~~~v~d~~~~~~~l----~~~G~~~~~~~p~~~~~-g~~~~~~~~~DPdG~~iel~~~~~  147 (148)
T 1jc4_A           87 AGLHHMAWRVDDIDAVSATL----RERGVQLLYDEPKLGTG-GNRINFMHPKSGKGVLIELTQYPK  147 (148)
T ss_dssp             CEEEEEEEECSCHHHHHHHH----HHHTCCBSCSSCEECSS-SCEEEEBCGGGGTTSCEEEEECCC
T ss_pred             CceEEEEEECCCHHHHHHHH----HHCCCeecCcCcccCCC-ceEEEEEeecCCCcEEEEEEecCC
Confidence            57889999999999999999    99999987 44544333 3467777  999999999998753

>3sk2_A EHPR; antibiotic resistance, griseoluteate-binding protein; HET: GRI; 1.01A {Pantoea agglomerans} PDB: 3sk1_A*

Probab=99.76  E-value=1.7e-17  Score=122.77  Aligned_cols=116  Identities=16%  Similarity=0.100  Sum_probs=87.5

Q ss_pred             cceeeEEEEEEeCCHHHHHHHHHhhcCCEEEEEeecCCCceeEEEEecCCCCcceEEEeeecCCCCcccCCCCceEEEEE
Q 022818           20 DKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIA   99 (291)
Q Consensus        20 ~~~~i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~~~~i~~~   99 (291)
                      .+.+++|+.|.|+|++++++||+++|||++....+      ....+..++ .  ..+.+........ ....+..|++|.
T Consensus        10 ~~~~i~~v~l~v~D~~~s~~FY~~~lG~~~~~~~~------~~~~~~~~~-~--~~l~l~~~~~~~~-~~~~~~~~~~~~   79 (132)
T 3sk2_A           10 PTITPNLQLVYVSNVERSTDFYRFIFKKEPVFVTP------RYVAFPSSG-D--ALFAIWSGGEEPV-AEIPRFSEIGIM   79 (132)
T ss_dssp             CCCCCCEEEEECSCHHHHHHHHHHHHTCCCSEECS------SEEEEECST-T--CEEEEESSSCCCC-TTSCCCEEEEEE
T ss_pred             CcceeeEEEEEECCHHHHHHHHHHHcCCeEEEcCC------CEEEEEcCC-C--cEEEEEeCCCCCc-CCCCCcceEEEE
Confidence            36799999999999999999999999999875432      123343322 1  2344443322111 233467899999


Q ss_pred             eCC---HHHHHHHHHH---cCCeeecCCeecCCCceEEEEEECCCCCEEEEEeC
Q 022818          100 TED---VYKLVENIRA---KGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQR  147 (291)
Q Consensus       100 v~d---~~~~~~~l~~---~G~~~~~~~~~~~~g~~~~~~~~Dp~G~~iel~~~  147 (291)
                      |+|   +++++++|++   +|+++..+|...++|  +.++|+||+||+|||++.
T Consensus        80 v~~~~dv~~~~~~l~~~~~~G~~~~~~p~~~~~g--~~~~~~DPdGn~iel~~~  131 (132)
T 3sk2_A           80 LPTGEDVDKLFNEWTKQKSHQIIVIKEPYTDVFG--RTFLISDPDGHIIRVCPL  131 (132)
T ss_dssp             ESSHHHHHHHHHHHHHCSSSCCEEEEEEEEETTE--EEEEEECTTCCEEEEEEC
T ss_pred             eCCHHHHHHHHHHHHhhhcCCCEEeeCCcccCce--EEEEEECCCCCEEEEEeC
Confidence            986   9999999999   999998888888877  458999999999999875

>2i7r_A Conserved domain protein; structural genomics conserved domain, PSI-2, protein structure initiative; 2.20A {Streptococcus pneumoniae} SCOP: d.32.1.2

Probab=99.76  E-value=1.2e-17  Score=121.06  Aligned_cols=115  Identities=17%  Similarity=0.170  Sum_probs=84.5

Q ss_pred             ceeeEEEEEEeCCHHHHHHHHHhhcCCEEEEEeecCCCceeEEEEecCCCCcceEEEeeecCCCCcccCCCCceEEEEEe
Q 022818           21 KRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIAT  100 (291)
Q Consensus        21 ~~~i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~~~~i~~~v  100 (291)
                      ++++.|+.|.|+|++++.+||+++|||++....+    .  ..++..++.  .+.+  ...........+.+ .|++|.|
T Consensus         3 ~m~i~~v~l~v~D~~~a~~FY~~~lG~~~~~~~~----~--~~~~~~~~~--~l~l--~~~~~~~~~~~~~~-~~~~~~v   71 (118)
T 2i7r_A            3 AMNLNQLDIIVSNVPQVCADLEHILDKKADYAND----G--FAQFTIGSH--CLML--SQNHLVPLENFQSG-IIIHIEV   71 (118)
T ss_dssp             -CEEEEEEEECSCHHHHHHHHHHHHTSCCSEEET----T--EEEEEETTE--EEEE--ESSCSSSCCCCCSC-EEEEEEC
T ss_pred             cceeeEEEEEeCCHHHHHHHHHHHhCCeeEEeCC----C--EEEEEeCCe--EEEE--EcCCCCCcccCCCe-EEEEEEE
Confidence            4689999999999999999999999999875322    1  344554432  2222  22111111112333 4899999


Q ss_pred             CCHHHHHHHHHHcCCeeecCCeecCCCceEEEEEECCCCCEEEEEeC
Q 022818          101 EDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQR  147 (291)
Q Consensus       101 ~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~Dp~G~~iel~~~  147 (291)
                      +|+++++++|+++|+++..+|...++|... ++++||+||.|||++.
T Consensus        72 ~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~-~~~~DPdG~~iel~~~  117 (118)
T 2i7r_A           72 EDVDQNYKRLNELGIKVLHGPTVTDWGTES-LLVQGPAGLVLDFYRM  117 (118)
T ss_dssp             SCHHHHHHHHHHHTCCEEEEEEECTTSCEE-EEEECGGGCEEEEEEC
T ss_pred             CCHHHHHHHHHHCCCceecCCccccCccEE-EEEECCCccEEEEEec
Confidence            999999999999999988888877777554 8999999999999875

>3rhe_A NAD-dependent benzaldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, SGX; 2.05A {Legionella pneumophila}

Probab=99.76  E-value=8.9e-18  Score=126.86  Aligned_cols=121  Identities=12%  Similarity=0.080  Sum_probs=84.9

Q ss_pred             CcceeeEEEEEEeCCHHHHHHHHHhhcCCEEEEEeecCCCceeEEEEecCCCCcceEEEeeecCCCCcc-cCCCCceEEE
Q 022818           19 KDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSY-DIGTGFGHFA   97 (291)
Q Consensus        19 ~~~~~i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~-~~g~~~~~i~   97 (291)
                      .|+++|.|+.|.|+|++++++||+++|||++....+      ...++..+++   ..+.+.......+. ....+..|++
T Consensus         2 ~m~~~i~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~------~~~~~~~~~g---~~l~l~~~~~~~~~~~~~~~~~~l~   72 (148)
T 3rhe_A            2 VMLSDPNLVLFYVKNPAKSEEFYKNLLDTQPIESSP------TFAMFVMKTG---LRLGLWAQEEIEPKAHQTGGGMELS   72 (148)
T ss_dssp             -----CEEEEEEESCHHHHHHHHHHHHTCCCSEECS------SEEEEECTTS---CEEEEEEGGGCSSCCC----CEEEE
T ss_pred             cccccccEEEEEeCCHHHHHHHHHHHcCCEEeccCC------CEEEEEcCCC---cEEEEecCCcCCccccCCCCeEEEE
Confidence            467899999999999999999999999999876532      2344554222   23444332221111 2234678999


Q ss_pred             EEeCC---HHHHHHHHHHcCCeeecCCeecCCCceEEEEEECCCCCEEEEEeCCCC
Q 022818           98 IATED---VYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRGPT  150 (291)
Q Consensus        98 ~~v~d---~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~Dp~G~~iel~~~~~~  150 (291)
                      |.|+|   +++++++|+++|+++..+|...++|  +.++|+||+||+|||++..+.
T Consensus        73 f~v~d~~dvd~~~~~l~~~G~~i~~~p~~~~~G--~~~~~~DPdG~~iel~~~~~~  126 (148)
T 3rhe_A           73 FQVNSNEMVDEIHRQWSDKEISIIQPPTQMDFG--YTFVGVDPDEHRLRIFCLKRT  126 (148)
T ss_dssp             EECSCHHHHHHHHHHHHHTTCCEEEEEEEETTE--EEEEEECTTCCEEEEEEEC--
T ss_pred             EEcCCHHHHHHHHHHHHhCCCEEEeCCeecCCC--cEEEEECCCCCEEEEEEcChh
Confidence            99987   9999999999999998888888876  458999999999999998754

>3rhe_A NAD-dependent benzaldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, SGX; 2.05A {Legionella pneumophila}

Probab=99.75  E-value=8.8e-18  Score=126.88  Aligned_cols=125  Identities=14%  Similarity=0.107  Sum_probs=84.2

Q ss_pred             CCceEEEeeeCChhhhHHHHHHhcCCeeeeeeccCCccceEEEeccccCCceeEEEEeeecCcce-eecCcceeEEEEEe
Q 022818          152 EPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTE-YTKGNAYAQVAIST  230 (291)
Q Consensus       152 ~~~~~v~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~-~~~~~~~~hi~~~v  230 (291)
                      .++.|+.|.|+|++++++||+++|||++....+    .+.  .+..++   +..+.+.......+ .....+..|++|.|
T Consensus         5 ~~i~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~----~~~--~~~~~~---g~~l~l~~~~~~~~~~~~~~~~~~l~f~v   75 (148)
T 3rhe_A            5 SDPNLVLFYVKNPAKSEEFYKNLLDTQPIESSP----TFA--MFVMKT---GLRLGLWAQEEIEPKAHQTGGGMELSFQV   75 (148)
T ss_dssp             --CEEEEEEESCHHHHHHHHHHHHTCCCSEECS----SEE--EEECTT---SCEEEEEEGGGCSSCCC----CEEEEEEC
T ss_pred             ccccEEEEEeCCHHHHHHHHHHHcCCEEeccCC----CEE--EEEcCC---CcEEEEecCCcCCccccCCCCeEEEEEEc
Confidence            478999999999999999999999999876532    233  333212   24455533221111 12234668999999


Q ss_pred             cc---hHHhHHHHHHHHHHhCCeeecCCccCCCCCceEEEEECCCCceEEEeechhhhhhhhcC
Q 022818          231 DD---VYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNEDFLKELQSE  291 (291)
Q Consensus       231 ~d---i~~~~~~l~~~~~~~G~~~~~~~~~~~~~~~~~~~~~DpdG~~iel~~~~~~~~~~~~~  291 (291)
                      +|   +++++++|    +++|+++..+|...++ | +.+||+|||||+|||++.....++..||
T Consensus        76 ~d~~dvd~~~~~l----~~~G~~i~~~p~~~~~-G-~~~~~~DPdG~~iel~~~~~~a~~~~~~  133 (148)
T 3rhe_A           76 NSNEMVDEIHRQW----SDKEISIIQPPTQMDF-G-YTFVGVDPDEHRLRIFCLKRTAENLYFQ  133 (148)
T ss_dssp             SCHHHHHHHHHHH----HHTTCCEEEEEEEETT-E-EEEEEECTTCCEEEEEEEC---------
T ss_pred             CCHHHHHHHHHHH----HhCCCEEEeCCeecCC-C-cEEEEECCCCCEEEEEEcChhHhhhhcc
Confidence            87   88888888    9999999988888777 3 8899999999999999998866555543

>1r9c_A Glutathione transferase; fosfomycin resistance protein, Mn binding, antibiotic resist transferase; 1.83A {Mesorhizobium loti} SCOP: d.32.1.2

Probab=99.75  E-value=1.9e-17  Score=123.56  Aligned_cols=118  Identities=19%  Similarity=0.304  Sum_probs=84.6

Q ss_pred             cceeeEEEEEEeCCHHHHHHHHHhhcCCEEEEEeecCCCceeE---EEEecCCCCcceEEEeeecCCCCcccCCCCceEE
Q 022818           20 DKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSN---AFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHF   96 (291)
Q Consensus        20 ~~~~i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~~~~i   96 (291)
                      |+++|+|+.|.|+|++++.+||+++|||++......  ..+..   .++..++    ..+.+......    ...+..|+
T Consensus         1 Mi~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~--~~~~~~~~~~~~~g~----~~l~l~~~~~~----~~~~~~h~   70 (139)
T 1r9c_A            1 MIEGLSHMTFIVRDLERMTRILEGVFDAREVYASDT--EQFSLSREKFFLIGD----IWVAIMQGEKL----AERSYNHI   70 (139)
T ss_dssp             CEEEEEEEEEEESCHHHHHHHHHHHHCCEEEEEGGG--STTCCSCEEEEEETT----EEEEEEECCCC----SSCCSCEE
T ss_pred             CCceEEEEEEEeCCHHHHHHHHHHhhCCEEeecCCC--ccccccceEEEEECC----EEEEEEeCCCC----CCCCeeEE
Confidence            578999999999999999999999999998765321  11110   1444432    23444433211    13478899


Q ss_pred             EEEeC--CHHHHHHHHHHcCCeeecCCeecCCCceEEEEEECCCCCEEEEEeCC
Q 022818           97 AIATE--DVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRG  148 (291)
Q Consensus        97 ~~~v~--d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~Dp~G~~iel~~~~  148 (291)
                      +|.|+  |+++++++|+++|+++..++...+++.. .++|+||+||.|||++..
T Consensus        71 ~~~v~~~d~~~~~~~l~~~G~~~~~~~~~~~~~~~-~~~~~DPdG~~iel~~~~  123 (139)
T 1r9c_A           71 AFKIDDADFDRYAERVGKLGLDMRPPRPRVEGEGR-SIYFYDDDNHMFELHTGT  123 (139)
T ss_dssp             EEECCGGGHHHHHHHHHHHTCCBCCCCC-----CC-EEEEECTTSCEEEEECCC
T ss_pred             EEEcCHHHHHHHHHHHHHCCCcccCCcccCCCCeE-EEEEECCCCCEEEEEeCC
Confidence            99998  9999999999999998877655555444 489999999999999753

>2p7o_A Glyoxalase family protein; fosfomycin resistance protein, Mn binding, antibiotic resist metal binding protein, hydrolase; 1.44A {Listeria monocytogenes} PDB: 2p7k_A 2p7l_A 2p7m_A 2p7p_A 2p7q_A

Probab=99.75  E-value=3.1e-17  Score=121.37  Aligned_cols=119  Identities=20%  Similarity=0.281  Sum_probs=86.5

Q ss_pred             cceeeEEEEEEeCCHHHHHHHHHhhcCCEEEEEeecCCCcee---EEEEecCCCCcceEEEeeecCCCCcccCCCCceEE
Q 022818           20 DKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYS---NAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHF   96 (291)
Q Consensus        20 ~~~~i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~~~~i   96 (291)
                      |+++|+|+.|.|+|++++.+||+++|||++....+  ...+.   ..++..++    ..+.+......    ...+..|+
T Consensus         1 Mi~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~--~~~~~~~~~~~~~~~~----~~l~l~~~~~~----~~~~~~h~   70 (133)
T 2p7o_A            1 MISGLSHITLIVKDLNKTTAFLQNIFNAEEIYSSG--DKTFSLSKEKFFLIAG----LWICIMEGDSL----QERTYNHI   70 (133)
T ss_dssp             CCCEEEEEEEEESCHHHHHHHHHHHHCCEECC-------CCCSSCEEEEEETT----EEEEEEECSSC----CCCCSCEE
T ss_pred             CCceEEEEEEEcCCHHHHHHHHHHhcCCEEeeecC--CcccccCCceEEEeCC----EEEEEecCCCC----CCCCeeEE
Confidence            57899999999999999999999999999875432  11111   01444432    23444433211    14578899


Q ss_pred             EEEe--CCHHHHHHHHHHcCCeeecCCeecCCCceEEEEEECCCCCEEEEEeCCC
Q 022818           97 AIAT--EDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRGP  149 (291)
Q Consensus        97 ~~~v--~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~Dp~G~~iel~~~~~  149 (291)
                      +|.|  +|+++++++|+++|+++..+|....++.. .++++||+||.|||++...
T Consensus        71 ~~~v~~~d~~~~~~~l~~~G~~~~~~~~~~~~~~~-~~~~~DPdG~~iel~~~~~  124 (133)
T 2p7o_A           71 AFQIQSEEVDEYTERIKALGVEMKPERPRVQGEGR-SIYFYDFDNHLFELHAGTL  124 (133)
T ss_dssp             EEECCGGGHHHHHHHHHHHTCCEECCCCCCTTCCC-EEEEECSSSCEEEEECSSC
T ss_pred             EEEcCHHHHHHHHHHHHHCCCcccCCCccCCCCee-EEEEECCCCCEEEEEcCCh
Confidence            9999  59999999999999998887765555444 4899999999999998753

>3kol_A Oxidoreductase, glyoxalase/bleomycin resistance protein/dioxygenase; metal ION binding, NYSGXRC, PSI2, structural genomics; 1.90A {Nostoc punctiforme pcc 73102}

Probab=99.75  E-value=1.2e-17  Score=126.83  Aligned_cols=124  Identities=21%  Similarity=0.232  Sum_probs=89.9

Q ss_pred             CCCceEEEeeeCChhhhHHHHHHhcCCeeeeeeccCC------ccceEEEeccccCCceeEEEEeeecCcce-----eec
Q 022818          151 PEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPE------YKYTLAMLGYAEEDQTTVLELTYNYGVTE-----YTK  219 (291)
Q Consensus       151 ~~~~~~v~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~l~l~~~~~~~~-----~~~  219 (291)
                      ..++.|+.|.|+|++++++||+++|||++......++      ......++..++   +..+++.......+     ...
T Consensus        17 ~~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~l~l~~~~~~~~~~~~~~~~   93 (156)
T 3kol_A           17 LRKVHHIALNVQDMQASRYFYGTILGLHELTDDEVPATLTELVASGKVANFITPD---GTILDLFGEPELSPPDPNPEKT   93 (156)
T ss_dssp             SCCCCEEEEEESCHHHHHHHHTTTSCCEECCTTTSCTTTHHHHHTTSEEEEECTT---SCEEEEEECTTCCCSSSSTTCC
T ss_pred             cceEeEEEEEeCCHHHHHHHHHhhcCCEEEeecccCcchhcccCCCcEEEEEeCC---CCEEEEEecCCCCcCCCCCCCC
Confidence            3579999999999999999999999999876322111      001223344332   24566655433211     113


Q ss_pred             CcceeEEEEEec--chHHhHHHHHHHHHHhCCeeecCCccCCCCCceEEEEECCCCceEEEeechh
Q 022818          220 GNAYAQVAISTD--DVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNED  283 (291)
Q Consensus       220 ~~~~~hi~~~v~--di~~~~~~l~~~~~~~G~~~~~~~~~~~~~~~~~~~~~DpdG~~iel~~~~~  283 (291)
                      ..+..|++|.|+  |+++++++|    +++|+++..+|...++  ++.+||+|||||.|||++...
T Consensus        94 ~~~~~h~~~~v~~~d~~~~~~~l----~~~G~~~~~~~~~~~~--g~~~~~~DPdG~~iel~~~~~  153 (156)
T 3kol_A           94 FTRAYHLAFDIDPQLFDRAVTVI----GENKIAIAHGPVTRPT--GRGVYFYDPDGFMIEIRCDPE  153 (156)
T ss_dssp             CSSCCEEEEECCGGGHHHHHHHH----HHTTCCEEEEEEEC-C--CEEEEEECTTSCEEEEEECCC
T ss_pred             CCceEEEEEEecHHHHHHHHHHH----HHCCCccccCceecCC--ccEEEEECCCCCEEEEEecCC
Confidence            457899999998  999999999    9999999888877655  479999999999999998754

>3itw_A Protein TIOX; bleomycin resistance fold, bisintercalator, solvent-exposed residue, thiocoraline, protein binding, peptide binding Pro; 2.15A {Micromonospora SP}

Probab=99.74  E-value=4.6e-17  Score=121.15  Aligned_cols=120  Identities=16%  Similarity=0.093  Sum_probs=88.2

Q ss_pred             ceEEEeeeCChhhhHHHHHHhcCCeeeeeeccCCccceEEEeccccCCceeEEEEeeecCcce-eecC-cceeEEEEEec
Q 022818          154 LCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTE-YTKG-NAYAQVAISTD  231 (291)
Q Consensus       154 ~~~v~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~-~~~~-~~~~hi~~~v~  231 (291)
                      ...+.|.|+|++++++||+++|||++......+ +......+..+    ...+.+....+... ...+ .+..|++|.|+
T Consensus         3 ~~~i~l~v~D~~~a~~FY~~~lG~~~~~~~~~~-g~~~~~~l~~~----~~~l~l~~~~~~~~~~~~~~~~~~~~~~~v~   77 (137)
T 3itw_A            3 HMVVELAYTDPDRAVDWLVRVFGFRLLLRQPAI-GTIRHADLDTG----GGIVMVRRTGEPYTVSCAGGHTCKQVIVWVS   77 (137)
T ss_dssp             CCEEEEEESCHHHHHHHHHHHHCCEEEEEESSS-SSCSEEEEECS----SSEEEEEETTCCSSCEECCCCCCCEEEEEES
T ss_pred             eEEEEEEECCHHHHHHHHHHccCCEEEEEecCC-CcEEEEEEecC----CeEEEEEecCCCcCccCCCCCcEEEEEEEeC
Confidence            457899999999999999999999988765443 33334444432    23444533222111 1122 23349999999


Q ss_pred             chHHhHHHHHHHHHHhCCeeecCCccCCCCCceEEEEECCCCceEEEeechh
Q 022818          232 DVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNED  283 (291)
Q Consensus       232 di~~~~~~l~~~~~~~G~~~~~~~~~~~~~~~~~~~~~DpdG~~iel~~~~~  283 (291)
                      |+++++++|    +++|+++..+|...++ +.+.++|+|||||.|||++...
T Consensus        78 dv~~~~~~l----~~~G~~~~~~~~~~~~-g~~~~~~~DPdG~~iel~~~~~  124 (137)
T 3itw_A           78 DVDEHFMRS----TAAGADIVQPLQDKPW-GLRQYLVRDLEGHLWEFTRHLR  124 (137)
T ss_dssp             CHHHHHHHH----HHTTCEEEEEEEEETT-TEEEEEEECSSSCEEEEEECC-
T ss_pred             CHHHHHHHH----HHcCCeeccCccccCC-CcEEEEEECCCCCEEEEEEEcC
Confidence            999999999    9999999988888776 4589999999999999999754

>2qqz_A Glyoxalase family protein, putative; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; HET: MSE; 1.92A {Bacillus anthracis str}

Probab=99.74  E-value=5.5e-17  Score=118.92  Aligned_cols=118  Identities=15%  Similarity=0.218  Sum_probs=86.3

Q ss_pred             CcceeeEEEEEEe--CCHHHHHHHHHhhcCCEEEEEeecCCCceeEEEEecCCCCcceEEEeeecCCCCcccCCCCceEE
Q 022818           19 KDKRRFLHAVYRV--GDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHF   96 (291)
Q Consensus        19 ~~~~~i~hv~l~v--~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~~~~i   96 (291)
                      +|+.+|+|+.|.|  +|++++.+||+++|||++..+...... ....++..++.    .+.+.......    ..+..|+
T Consensus         6 m~~~~i~hv~l~v~~~D~~~a~~FY~~~lG~~~~~~~~~~~~-~~~~~~~~~~~----~l~l~~~~~~~----~~~~~~~   76 (126)
T 2qqz_A            6 NYIQGIDHVQVAAPVGCEEEARAFYGETIGMEEIPKPEELKK-RGGCWFKCGNQ----EIHIGVEQNFN----PAKRAHP   76 (126)
T ss_dssp             CCEEEEEEEEEEECTTTHHHHHHHHTTTTCCEEECCCGGGGG-GCCEEEEETTE----EEEEEECTTCC----CCSSSCE
T ss_pred             cccceeeeEEEEcccccHHHHHHHHHhcCCCEEecCcccccC-CCceEEEeCCE----EEEEEecCCCC----CCCceEE
Confidence            5689999999999  899999999999999998765321100 11245555432    23343322111    2367899


Q ss_pred             EEEeCCHHHHHHHHHHcCCeeecCCeecCCCceEEEEEECCCCCEEEEEeCC
Q 022818           97 AIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRG  148 (291)
Q Consensus        97 ~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~Dp~G~~iel~~~~  148 (291)
                      +|.|+|+++++++|+++|+++..++.  .+|. +.++|+||+||.|||++..
T Consensus        77 ~f~v~d~~~~~~~l~~~G~~~~~~~~--~~g~-~~~~~~DPdG~~iel~~~~  125 (126)
T 2qqz_A           77 AFYVLKIDEFKQELIKQGIEVIDDHA--RPDV-IRFYVSDPFGNRIEFMENK  125 (126)
T ss_dssp             EEEETTHHHHHHHHHHTTCCCEEECS--STTE-EEEEEECTTSCEEEEEEEC
T ss_pred             EEEcCCHHHHHHHHHHcCCCccCCCC--CCCe-eEEEEECCCCCEEEEEeCC
Confidence            99999999999999999999877652  2343 4589999999999999853

>3sk2_A EHPR; antibiotic resistance, griseoluteate-binding protein; HET: GRI; 1.01A {Pantoea agglomerans} PDB: 3sk1_A*

Probab=99.74  E-value=3.3e-17  Score=121.21  Aligned_cols=115  Identities=12%  Similarity=0.083  Sum_probs=85.9

Q ss_pred             CCCceEEEeeeCChhhhHHHHHHhcCCeeeeeeccCCccceEEEeccccCCceeEEEEeeecCcceeecCcceeEEEEEe
Q 022818          151 PEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAIST  230 (291)
Q Consensus       151 ~~~~~~v~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~hi~~~v  230 (291)
                      ..++.|+.|.|+|++++++||+++|||++....+    .+..  +..++   +..+.+....... ....++..|++|.|
T Consensus        11 ~~~i~~v~l~v~D~~~s~~FY~~~lG~~~~~~~~----~~~~--~~~~~---~~~l~l~~~~~~~-~~~~~~~~~~~~~v   80 (132)
T 3sk2_A           11 TITPNLQLVYVSNVERSTDFYRFIFKKEPVFVTP----RYVA--FPSSG---DALFAIWSGGEEP-VAEIPRFSEIGIML   80 (132)
T ss_dssp             CCCCCEEEEECSCHHHHHHHHHHHHTCCCSEECS----SEEE--EECST---TCEEEEESSSCCC-CTTSCCCEEEEEEE
T ss_pred             cceeeEEEEEECCHHHHHHHHHHHcCCeEEEcCC----CEEE--EEcCC---CcEEEEEeCCCCC-cCCCCCcceEEEEe
Confidence            3589999999999999999999999999875432    1222  22112   2445554322111 12334678999999


Q ss_pred             cc---hHHhHHHHHHHHHH---hCCeeecCCccCCCCCceEEEEECCCCceEEEeec
Q 022818          231 DD---VYKSAEVVNLVTQE---LGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDN  281 (291)
Q Consensus       231 ~d---i~~~~~~l~~~~~~---~G~~~~~~~~~~~~~~~~~~~~~DpdG~~iel~~~  281 (291)
                      +|   +++++++|    ++   +|+++..+|...++ + +.+||+|||||+|||++.
T Consensus        81 ~~~~dv~~~~~~l----~~~~~~G~~~~~~p~~~~~-g-~~~~~~DPdGn~iel~~~  131 (132)
T 3sk2_A           81 PTGEDVDKLFNEW----TKQKSHQIIVIKEPYTDVF-G-RTFLISDPDGHIIRVCPL  131 (132)
T ss_dssp             SSHHHHHHHHHHH----HHCSSSCCEEEEEEEEETT-E-EEEEEECTTCCEEEEEEC
T ss_pred             CCHHHHHHHHHHH----HhhhcCCCEEeeCCcccCc-e-EEEEEECCCCCEEEEEeC
Confidence            86   88888888    99   99999988887776 3 899999999999999875

>3g12_A Putative lactoylglutathione lyase; glyoxalase, bleomycin resistance, PSI-2, NYSGXRC, structural genomics; 2.58A {Bdellovibrio bacteriovorus HD100}

Probab=99.74  E-value=3.1e-17  Score=120.70  Aligned_cols=117  Identities=15%  Similarity=0.223  Sum_probs=81.1

Q ss_pred             CceEEEeeeCChhhhHHHHHHhcCCeeeeeeccCCccceEEEeccccCCceeEEEEeeecCcceeecCcceeEEEEEecc
Q 022818          153 PLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDD  232 (291)
Q Consensus       153 ~~~~v~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~hi~~~v~d  232 (291)
                      .|.|+.|.|+|++++++||++ |||++..... +.+.+..+...  .   +..+.+....+.  .....+..|++|.|+|
T Consensus         6 ~i~hv~l~v~D~~~a~~FY~~-LG~~~~~~~~-~~~~~~~~~~~--~---~~~l~l~~~~~~--~~~~~~~~~l~f~v~d   76 (128)
T 3g12_A            6 LITSITINTSHLQGMLGFYRI-IGFQFTASKV-DKGSEVHRAVH--N---GVEFSLYSIQNP--QRSQIPSLQLGFQITD   76 (128)
T ss_dssp             EEEEEEEEESCHHHHHHHHHH-HTCCCEEC------CCEEEEEE--T---TEEEEEEECCCC--SSCCCCSEEEEEEESC
T ss_pred             eEEEEEEEcCCHHHHHHHHHH-CCCEEecccC-CCCCEEEEEeC--C---CeEEEEEECCCC--cCCCCCceEEEEEeCC
Confidence            589999999999999999999 9999775521 11123333211  1   234454322221  1223355789999999


Q ss_pred             hHHhHHHHHHHHHHhCCe-eecCCccCCCCCceEEEEECCCCceEEEeechhh
Q 022818          233 VYKSAEVVNLVTQELGGK-ITRQPGSIPGLNTKITSFVDPDGWKTVLVDNEDF  284 (291)
Q Consensus       233 i~~~~~~l~~~~~~~G~~-~~~~~~~~~~~~~~~~~~~DpdG~~iel~~~~~~  284 (291)
                      ++++++++    +++|++ +..+|...++ |.+ ++|+|||||+|||.+..+.
T Consensus        77 vd~~~~~l----~~~G~~~~~~~p~~~~~-G~~-~~~~DPdGn~iel~~~~~~  123 (128)
T 3g12_A           77 LEKTVQEL----VKIPGAMCILDPTDMPD-GKK-AIVLDPDGHSIELCELEGH  123 (128)
T ss_dssp             HHHHHHHH----TTSTTCEEEEEEEECC--CEE-EEEECTTCCEEEEEC----
T ss_pred             HHHHHHHH----HHCCCceeccCceeCCC-ccE-EEEECCCCCEEEEEEeccc
Confidence            99999999    999999 8888887776 345 9999999999999988764

>3rri_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-biology, midwest center for structu genomics; 1.50A {Alicyclobacillus acidocaldarius subsp}

Probab=99.74  E-value=1e-16  Score=118.86  Aligned_cols=120  Identities=19%  Similarity=0.253  Sum_probs=85.2

Q ss_pred             CcceeeEEEEEEeCCHHHHHHHHHhhcCCEEEEEeecCCCceeEEEEecCCCCcceEEEeeecCCCCcccCCCCceEEEE
Q 022818           19 KDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAI   98 (291)
Q Consensus        19 ~~~~~i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~~~~i~~   98 (291)
                      +..++|+||.|.|+|++++++||+++|||++.....      ....+..++.  .+.+....... .+  ...+..|++|
T Consensus         5 ~~~~~i~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~~------~~~~~~~~g~--~~~l~~~~~~~-~~--~~~~~~h~~~   73 (135)
T 3rri_A            5 RNPNDVFHLAIPARDLDEAYDFYVTKLGCKLARRYP------DRITLDFFGD--QLVCHLSDRWD-RE--VSMYPRHFGI   73 (135)
T ss_dssp             CCTTSEEEEEEEESCHHHHHHHHTTTTCCEEEEEET------TEEEEEETTE--EEEEEECSCSC-SS--CCSSSCEEEE
T ss_pred             cCCCccceEEEEcCCHHHHHHHHHHhcCCEeeccCC------CcEEEEEeCC--EEEEEEcCccc-cc--CCCCCCeEEE
Confidence            446789999999999999999999999999965432      1234443222  23333322211 11  2345779999


Q ss_pred             EeC---CHHHHHHHHHHcCCeeecCCeecC---CCceEEEEEECCCCCEEEEEeCCC
Q 022818           99 ATE---DVYKLVENIRAKGGNVTREPGPLK---GGTTHIAFVKDPDGYIFELIQRGP  149 (291)
Q Consensus        99 ~v~---d~~~~~~~l~~~G~~~~~~~~~~~---~g~~~~~~~~Dp~G~~iel~~~~~  149 (291)
                      .+.   |+++++++|+++|+++...|....   .+..+.+||+||+||.|||.+..+
T Consensus        74 ~~~~~~d~~~~~~~l~~~G~~~~~~p~~~~~~~~~~~~~~~~~DPdGn~iel~~~~~  130 (135)
T 3rri_A           74 TFRDKKHFDNLYKLAKQRGIPFYHDLSRRFEGLIEEHETFFLIDPSNNLLEFKYYFD  130 (135)
T ss_dssp             ECSSHHHHHHHHHHHHHTTCCEEEEEEEESTTSTTCEEEEEEECTTCCEEEEEEESS
T ss_pred             EEcChHhHHHHHHHHHHcCCceecCcccccCCCCCceEEEEEECCCCCEEEEEEECC
Confidence            985   599999999999999877666531   233445899999999999998653

>3zw5_A Glyoxalase domain-containing protein 5; lyase; 1.60A {Homo sapiens}

Probab=99.74  E-value=1.7e-17  Score=125.19  Aligned_cols=123  Identities=22%  Similarity=0.362  Sum_probs=86.4

Q ss_pred             CCCCcceeeEEEEEEeCCHHHHHHHHHhhcCCEEEEEeecCCCceeEEEEecCCCCcceEEEeeecC-CCCcccCCCCce
Q 022818           16 WPKKDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNY-GVTSYDIGTGFG   94 (291)
Q Consensus        16 ~~~~~~~~i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~g~~~~   94 (291)
                      .+++++.+|+||.|.|+|++++++||+++|||++....   ++   ..++..++.  .+.+...... .+.......+..
T Consensus        20 m~~m~i~~i~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~---~~---~~~l~~g~~--~l~l~~~~~~~~~~~~~~~~g~~   91 (147)
T 3zw5_A           20 FQSMLIRRLDHIVMTVKSIKDTTMFYSKILGMEVMTFK---ED---RKALCFGDQ--KFNLHEVGKEFEPKAAHPVPGSL   91 (147)
T ss_dssp             HHHTSCEEEEEEEEEESCHHHHHHHHHHHHCCEEEEET---TT---EEEEEETTE--EEEEEETTSCCSSCCSSCCTTCC
T ss_pred             ecceecccccEEEEEeCCHHHHHHHHHHhcCCEEEecC---CC---ceEEEECCc--EEEEEEcCCCcCcccCCCCCCCc
Confidence            34567899999999999999999999999999997542   11   234554432  2222221111 111112344678


Q ss_pred             EEEEEeC-CHHHHHHHHHHcCCeeecCCeecCC--CceEEEEEECCCCCEEEEEe
Q 022818           95 HFAIATE-DVYKLVENIRAKGGNVTREPGPLKG--GTTHIAFVKDPDGYIFELIQ  146 (291)
Q Consensus        95 ~i~~~v~-d~~~~~~~l~~~G~~~~~~~~~~~~--g~~~~~~~~Dp~G~~iel~~  146 (291)
                      |++|.+. |+++++++|+++|+++...|....+  |..+.++|+|||||+|||++
T Consensus        92 ~~~~~~~~dl~~~~~~l~~~G~~~~~~p~~~~~~~g~~~~~~~~DPdGn~iEl~~  146 (147)
T 3zw5_A           92 DICLITEVPLEEMIQHLKACDVPIEEGPVPRTGAKGPIMSIYFRDPDRNLIEVSN  146 (147)
T ss_dssp             EEEEECSSCHHHHHHHHHHTTCCCCEEEEEEEETTEEEEEEEEECTTCCEEEEEE
T ss_pred             eEEEEeccCHHHHHHHHHHcCCceeeCcccccCCCCceEEEEEECCCCCEEEEec
Confidence            8999885 9999999999999998765544332  33345899999999999986

>2i7r_A Conserved domain protein; structural genomics conserved domain, PSI-2, protein structure initiative; 2.20A {Streptococcus pneumoniae} SCOP: d.32.1.2

Probab=99.74  E-value=2.9e-17  Score=118.98  Aligned_cols=114  Identities=20%  Similarity=0.129  Sum_probs=83.2

Q ss_pred             CCceEEEeeeCChhhhHHHHHHhcCCeeeeeeccCCccceEEEeccccCCceeEEEEeeecCcceeecCcceeEEEEEec
Q 022818          152 EPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTD  231 (291)
Q Consensus       152 ~~~~~v~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~hi~~~v~  231 (291)
                      +++.|+.|.|+|++++.+||+++|||++....+    .+  ..+..+.    ..+.+......+....+.+ .|++|.|+
T Consensus         4 m~i~~v~l~v~D~~~a~~FY~~~lG~~~~~~~~----~~--~~~~~~~----~~l~l~~~~~~~~~~~~~~-~~~~~~v~   72 (118)
T 2i7r_A            4 MNLNQLDIIVSNVPQVCADLEHILDKKADYAND----GF--AQFTIGS----HCLMLSQNHLVPLENFQSG-IIIHIEVE   72 (118)
T ss_dssp             CEEEEEEEECSCHHHHHHHHHHHHTSCCSEEET----TE--EEEEETT----EEEEEESSCSSSCCCCCSC-EEEEEECS
T ss_pred             ceeeEEEEEeCCHHHHHHHHHHHhCCeeEEeCC----CE--EEEEeCC----eEEEEEcCCCCCcccCCCe-EEEEEEEC
Confidence            578999999999999999999999999864321    12  2333222    2333322111111112234 58999999


Q ss_pred             chHHhHHHHHHHHHHhCCeeecCCccCCCCCceEEEEECCCCceEEEeec
Q 022818          232 DVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDN  281 (291)
Q Consensus       232 di~~~~~~l~~~~~~~G~~~~~~~~~~~~~~~~~~~~~DpdG~~iel~~~  281 (291)
                      |+++++++|    +++|+++..+|...++ +.+.+||+|||||.|||++.
T Consensus        73 d~~~~~~~l----~~~G~~~~~~~~~~~~-g~~~~~~~DPdG~~iel~~~  117 (118)
T 2i7r_A           73 DVDQNYKRL----NELGIKVLHGPTVTDW-GTESLLVQGPAGLVLDFYRM  117 (118)
T ss_dssp             CHHHHHHHH----HHHTCCEEEEEEECTT-SCEEEEEECGGGCEEEEEEC
T ss_pred             CHHHHHHHH----HHCCCceecCCccccC-ccEEEEEECCCccEEEEEec
Confidence            999999999    9999999888877776 45889999999999999875

>2pjs_A AGR_C_3564P, uncharacterized protein ATU1953; glyoxalase/bleomycin resistance protein/dioxygenase superfamily, structural genomics; 1.85A {Agrobacterium tumefaciens str} SCOP: d.32.1.2

Probab=99.74  E-value=2.9e-17  Score=119.08  Aligned_cols=115  Identities=19%  Similarity=0.241  Sum_probs=85.7

Q ss_pred             CcceeeEEEEEEeCCHHHHHHHHHhhcCCEEEEEeecCCCceeEEEEecCCCCcceEEEeeecCCCCcccCCCCceEEEE
Q 022818           19 KDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAI   98 (291)
Q Consensus        19 ~~~~~i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~~~~i~~   98 (291)
                      +.+.++ |+.|.|+|++++.+||+++|||++....    +  ...++..++ ...+.+.+.....     ...+..|++|
T Consensus         4 m~i~~i-~v~l~v~d~~~a~~FY~~~lG~~~~~~~----~--~~~~~~~~~-~~~~~l~l~~~~~-----~~~~~~~~~~   70 (119)
T 2pjs_A            4 MAVRRV-VANIATPEPARAQAFYGDILGMPVAMDH----G--WIVTHASPL-EAHAQVSFAREGG-----SGTDVPDLSI   70 (119)
T ss_dssp             -CEEEE-EEEEECSCGGGGHHHHTTTTCCCEEEEC----S--SEEEEEEEE-EEEEEEEEESSSB-----TTBCCCSEEE
T ss_pred             cceeEE-EEEEEcCCHHHHHHHHHHhcCCEEEecC----C--EEEEEecCC-CCcEEEEEEcCCC-----CCCceeEEEE
Confidence            357888 9999999999999999999999987641    1  123343321 1123344443211     1235679999


Q ss_pred             EeCCHHHHHHHHHHcCCeeecCCeecCCCceEEEEEECCCCCEEEEEeC
Q 022818           99 ATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQR  147 (291)
Q Consensus        99 ~v~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~Dp~G~~iel~~~  147 (291)
                      .|+|+++++++|+++|+++..+|...++|.. .++++||+||.|+|++.
T Consensus        71 ~v~d~~~~~~~l~~~G~~~~~~~~~~~~g~~-~~~~~DPdG~~iel~~~  118 (119)
T 2pjs_A           71 EVDNFDEVHARILKAGLPIEYGPVTEAWGVQ-RLFLRDPFGKLINILSH  118 (119)
T ss_dssp             EESCHHHHHHHHHHTTCCCSEEEEECTTSCE-EEEEECTTSCEEEEEEC
T ss_pred             EECCHHHHHHHHHHCCCccccCCccCCCccE-EEEEECCCCCEEEEEec
Confidence            9999999999999999998887777777754 48999999999999875

>3g12_A Putative lactoylglutathione lyase; glyoxalase, bleomycin resistance, PSI-2, NYSGXRC, structural genomics; 2.58A {Bdellovibrio bacteriovorus HD100}

Probab=99.73  E-value=5.2e-17  Score=119.52  Aligned_cols=118  Identities=16%  Similarity=0.166  Sum_probs=81.9

Q ss_pred             cceeeEEEEEEeCCHHHHHHHHHhhcCCEEEEEeecCCCceeEEEEe-cCCCCcceEEEeeecCCCCcccCCCCceEEEE
Q 022818           20 DKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLG-FGPEQSHFVVELTYNYGVTSYDIGTGFGHFAI   98 (291)
Q Consensus        20 ~~~~i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~~~~~~~~~~~g~~~~~i~~   98 (291)
                      +...|+||.|.|+|++++++||++ |||++...... .+.  ..++. .++  ..  +.+.....  ......+..+++|
T Consensus         3 ~~~~i~hv~l~v~D~~~a~~FY~~-LG~~~~~~~~~-~~~--~~~~~~~~~--~~--l~l~~~~~--~~~~~~~~~~l~f   72 (128)
T 3g12_A            3 LSLLITSITINTSHLQGMLGFYRI-IGFQFTASKVD-KGS--EVHRAVHNG--VE--FSLYSIQN--PQRSQIPSLQLGF   72 (128)
T ss_dssp             -CEEEEEEEEEESCHHHHHHHHHH-HTCCCEEC------C--CEEEEEETT--EE--EEEEECCC--CSSCCCCSEEEEE
T ss_pred             ccceEEEEEEEcCCHHHHHHHHHH-CCCEEecccCC-CCC--EEEEEeCCC--eE--EEEEECCC--CcCCCCCceEEEE
Confidence            567899999999999999999999 99998764211 111  23333 222  22  33322211  1112234578999


Q ss_pred             EeCCHHHHHHHHHHcCCe-eecCCeecCCCceEEEEEECCCCCEEEEEeCCC
Q 022818           99 ATEDVYKLVENIRAKGGN-VTREPGPLKGGTTHIAFVKDPDGYIFELIQRGP  149 (291)
Q Consensus        99 ~v~d~~~~~~~l~~~G~~-~~~~~~~~~~g~~~~~~~~Dp~G~~iel~~~~~  149 (291)
                      .|+|+++++++|+++|++ +..+|...++|..  ++|+|||||+|+|.+..+
T Consensus        73 ~v~dvd~~~~~l~~~G~~~~~~~p~~~~~G~~--~~~~DPdGn~iel~~~~~  122 (128)
T 3g12_A           73 QITDLEKTVQELVKIPGAMCILDPTDMPDGKK--AIVLDPDGHSIELCELEG  122 (128)
T ss_dssp             EESCHHHHHHHHTTSTTCEEEEEEEECC-CEE--EEEECTTCCEEEEEC---
T ss_pred             EeCCHHHHHHHHHHCCCceeccCceeCCCccE--EEEECCCCCEEEEEEecc
Confidence            999999999999999999 8877888887654  899999999999998764

>3ey7_A Biphenyl-2,3-DIOL 1,2-dioxygenase III-related protein; integron cassette protein mobIle metagenome structural genomics, oxidoreductase, PSI-2; HET: MSE; 1.60A {Vibrio cholerae} PDB: 3ey8_A*

Probab=99.73  E-value=2.5e-17  Score=121.61  Aligned_cols=119  Identities=23%  Similarity=0.253  Sum_probs=87.3

Q ss_pred             CCCceEEEeeeCChhhhHHHHHHhcCCeeeeeeccCCccceEEEeccccCCceeEEEEeeecCcc---eeecCcceeEEE
Q 022818          151 PEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVT---EYTKGNAYAQVA  227 (291)
Q Consensus       151 ~~~~~~v~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~---~~~~~~~~~hi~  227 (291)
                      ..++.|+.|.|+|++++.+||+++|||++....   +   ....+..+    ...+.+.......   ....+++..|++
T Consensus         8 ~~~i~hi~l~v~D~~~a~~FY~~~lG~~~~~~~---~---~~~~~~~~----~~~~~l~~~~~~~~~~~~~~~~~~~~~~   77 (133)
T 3ey7_A            8 ISHLDHLVLTVADIPTTTNFYEKVLGMKAVSFG---A---GRIALEFG----HQKINLHQLGNEFEPKAQNVRVGSADLC   77 (133)
T ss_dssp             CCEEEEEEEEESCHHHHHHHHHHHHCCEEEEET---T---TEEEEEET----TEEEEEEETTSCCSSCCTTCCTTCCEEE
T ss_pred             ecccCEEEEEECCHHHHHHHHHHccCceEEEec---C---CeEEEEcC----CEEEEEEcCCCCccccCCCCCCCccEEE
Confidence            347899999999999999999999999987653   1   12223322    2445554332211   112345789999


Q ss_pred             EEecc-hHHhHHHHHHHHHHhCCeeecCCccCCCCC--ceEEEEECCCCceEEEeechh
Q 022818          228 ISTDD-VYKSAEVVNLVTQELGGKITRQPGSIPGLN--TKITSFVDPDGWKTVLVDNED  283 (291)
Q Consensus       228 ~~v~d-i~~~~~~l~~~~~~~G~~~~~~~~~~~~~~--~~~~~~~DpdG~~iel~~~~~  283 (291)
                      |.|+| +++++++|    +++|+++..+|...++..  .+.+||+|||||+|||++..+
T Consensus        78 ~~v~dd~~~~~~~l----~~~G~~~~~~~~~~~~~~g~~~~~~~~DPdG~~iel~~~~~  132 (133)
T 3ey7_A           78 FITDTVLSDAMKHV----EDQGVTIMEGPVKRTGAQGAITSFYFRDPDGNLIEVSTYSN  132 (133)
T ss_dssp             EECSSCHHHHHHHH----HHTTCCCCEEEEEEEETTEEEEEEEEECTTCCEEEEEESCC
T ss_pred             EEeCcHHHHHHHHH----HHCCCccccCCccccCCCCCeEEEEEECCCCCEEEEEecCC
Confidence            99997 99999999    999999988776554422  278999999999999998753

>3r6a_A Uncharacterized protein; PSI biology, structural genomics, NEW YORK structural genomi research consortium, putative glyoxalase I; 1.76A {Methanosarcina mazei}

Probab=99.73  E-value=2.8e-17  Score=123.47  Aligned_cols=120  Identities=16%  Similarity=0.238  Sum_probs=87.2

Q ss_pred             CcceeeEEEEEEeCCHHHHHHHHHhhcCCEEEEEeecCCCceeEEEEecCCCCcceEEEeeecCCCCcccCCCCceEEEE
Q 022818           19 KDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAI   98 (291)
Q Consensus        19 ~~~~~i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~~~~i~~   98 (291)
                      +++.++. +.|.|+|++++++||+++|||++..+...++.......+  +.      +.+...... . ....+..|++|
T Consensus         3 M~i~~i~-i~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~~--~~------~~l~~~~~~-~-~~~~~~~hl~f   71 (144)
T 3r6a_A            3 MKILQIL-SRLYVADLNPALEFYEELLETPVAMRFEIPQTGVELAQI--ST------ILLIAGSEE-A-LKPFRNTQATF   71 (144)
T ss_dssp             CCEEEEE-EEEEESCHHHHHHHHHHHTTCCCCEECCCSCSSCEEEEE--TT------EEEEESCHH-H-HGGGGGCCEEE
T ss_pred             EEEEEEE-EEEEECCHHHHHHHHHHhcCCEEEEEeccCCccEEEEEe--cc------EEEecCCcc-c-CCCCcceEEEE
Confidence            3467777 999999999999999999999987765444333333322  21      112222110 0 01124589999


Q ss_pred             EeCCHHHHHHHHHHcCCeeecCCeecCCCceEEEEEECCCCCEEEEEeCCCCC
Q 022818           99 ATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRGPTP  151 (291)
Q Consensus        99 ~v~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~Dp~G~~iel~~~~~~~  151 (291)
                      .|+|+++++++|+++|+++..+|...++| + .++|+||+||+|||++..+.+
T Consensus        72 ~V~d~d~~~~~l~~~G~~v~~~p~~~~~G-~-~~~~~DPdG~~iel~~~~~~~  122 (144)
T 3r6a_A           72 LVDSLDKFKTFLEENGAEIIRGPSKVPTG-R-NMTVRHSDGSVIEYVEHSKIE  122 (144)
T ss_dssp             EESCHHHHHHHHHHTTCEEEEEEEEETTE-E-EEEEECTTSCEEEEEEECC--
T ss_pred             EeCCHHHHHHHHHHcCCEEecCCccCCCc-e-EEEEECCCCCEEEEEEcCCcc
Confidence            99999999999999999998888887776 3 489999999999999987654

>2kjz_A ATC0852; protein of unknown function, dimer, structural genomics, PSI protein structure initiative; NMR {Agrobacterium tumefaciens}

Probab=99.73  E-value=4.4e-17  Score=122.44  Aligned_cols=117  Identities=15%  Similarity=0.192  Sum_probs=88.0

Q ss_pred             ceeeEEEEEEeCCHHHHHHHHHhhcCCEEEEEeecCCCceeEEEEecCCCCcceEEEeeecCCCCcc-cCCCCceEEEEE
Q 022818           21 KRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSY-DIGTGFGHFAIA   99 (291)
Q Consensus        21 ~~~i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~-~~g~~~~~i~~~   99 (291)
                      ++++.|+.|.|+|++++.+||+++|||++..+.+  .    ..++..++ .  ..+.+.......+. ..+.+..|++|.
T Consensus        23 m~~l~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~~--~----~~~~~~~~-~--~~l~l~~~~~~~~~~~~~~~~~hl~f~   93 (144)
T 2kjz_A           23 MTHPDFTILYVDNPPASTQFYKALLGVDPVESSP--T----FSLFVLAN-G--MKLGLWSRHTVEPKASVTGGGGELAFR   93 (144)
T ss_dssp             CCCCCEEEEEESCHHHHHHHHHHHHTCCCSEEET--T----EEEEECTT-S--CEEEEEETTSCSSCCCCSSSSCEEEEE
T ss_pred             cCceeEEEEEeCCHHHHHHHHHHccCCEeccCCC--C----eEEEEcCC-C--cEEEEEeCCCCCCccCCCCCceEEEEE
Confidence            5699999999999999999999999999876541  1    34455443 1  23444433222221 233578899999


Q ss_pred             eC---CHHHHHHHHHHcCCeeecCCeecCCCceEEEEEECCCCCEEEEEeCC
Q 022818          100 TE---DVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRG  148 (291)
Q Consensus       100 v~---d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~Dp~G~~iel~~~~  148 (291)
                      |+   |+++++++|+++|+++..+|...++|  +.++|+||+||.|||++..
T Consensus        94 v~d~~dv~~~~~~l~~~G~~~~~~~~~~~~g--~~~~~~DPdG~~iel~~~~  143 (144)
T 2kjz_A           94 VENDAQVDETFAGWKASGVAMLQQPAKMEFG--YTFTAADPDSHRLRVYAFA  143 (144)
T ss_dssp             CSSHHHHHHHHHHHHHTTCCCCSCCEEETTE--EEEEECCTTCCEEEEEEEC
T ss_pred             eCCHHHHHHHHHHHHHCCCeEecCceecCCc--eEEEEECCCCCEEEEEecC
Confidence            97   58999999999999998888877776  3589999999999999753

>3r6a_A Uncharacterized protein; PSI biology, structural genomics, NEW YORK structural genomi research consortium, putative glyoxalase I; 1.76A {Methanosarcina mazei}

Probab=99.73  E-value=3.4e-17  Score=123.02  Aligned_cols=111  Identities=23%  Similarity=0.301  Sum_probs=85.3

Q ss_pred             EEeeeCChhhhHHHHHHhcCCeeeeeeccCCccceEEEeccccCCceeEEEEeeecCcceeecCcceeEEEEEecchHHh
Q 022818          157 VMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDVYKS  236 (291)
Q Consensus       157 v~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~hi~~~v~di~~~  236 (291)
                      +.|.|+|++++++||+++|||++..+...++..+.+..++      .  +++...... + ..+.+..|++|.|+|++++
T Consensus        10 i~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~~~------~--~~l~~~~~~-~-~~~~~~~hl~f~V~d~d~~   79 (144)
T 3r6a_A           10 SRLYVADLNPALEFYEELLETPVAMRFEIPQTGVELAQIS------T--ILLIAGSEE-A-LKPFRNTQATFLVDSLDKF   79 (144)
T ss_dssp             EEEEESCHHHHHHHHHHHTTCCCCEECCCSCSSCEEEEET------T--EEEEESCHH-H-HGGGGGCCEEEEESCHHHH
T ss_pred             EEEEECCHHHHHHHHHHhcCCEEEEEeccCCccEEEEEec------c--EEEecCCcc-c-CCCCcceEEEEEeCCHHHH
Confidence            7899999999999999999999877655444444554433      1  333332211 1 1223558999999999999


Q ss_pred             HHHHHHHHHHhCCeeecCCccCCCCCceEEEEECCCCceEEEeechh
Q 022818          237 AEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNED  283 (291)
Q Consensus       237 ~~~l~~~~~~~G~~~~~~~~~~~~~~~~~~~~~DpdG~~iel~~~~~  283 (291)
                      +++|    +++|+++..+|...++  ++.+||+|||||+|||++..+
T Consensus        80 ~~~l----~~~G~~v~~~p~~~~~--G~~~~~~DPdG~~iel~~~~~  120 (144)
T 3r6a_A           80 KTFL----EENGAEIIRGPSKVPT--GRNMTVRHSDGSVIEYVEHSK  120 (144)
T ss_dssp             HHHH----HHTTCEEEEEEEEETT--EEEEEEECTTSCEEEEEEECC
T ss_pred             HHHH----HHcCCEEecCCccCCC--ceEEEEECCCCCEEEEEEcCC
Confidence            9999    9999999988887776  388999999999999999865

>3ghj_A Putative integron gene cassette protein; integron cassette protein, mobIle metagenome, structural genomics, PSI-2; 1.47A {Uncultured bacterium}

Probab=99.73  E-value=5.5e-17  Score=121.46  Aligned_cols=113  Identities=14%  Similarity=0.236  Sum_probs=84.8

Q ss_pred             CCCceEEEeeeCChhhhHHHHHHhcCCeeeeeeccCCccceEEEeccccCCceeEEEEeeecCcceeecCcceeEEEEEe
Q 022818          151 PEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAIST  230 (291)
Q Consensus       151 ~~~~~~v~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~hi~~~v  230 (291)
                      ..++.|+.|.|.|++++.+||+++|||++.....  +..+..+.++  .  ....+.+....      ...+..|++|.|
T Consensus        26 i~~i~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~~--~~~~~~~~~~--~--~~~~l~l~~~~------~~~~~~h~~~~v   93 (141)
T 3ghj_A           26 IKGLFEVAVKVKNLEKSSQFYTEILGFEAGLLDS--ARRWNFLWVS--G--RAGMVVLQEEK------ENWQQQHFSFRV   93 (141)
T ss_dssp             CCCCCEEEEEESCHHHHHHHHHHTSCCEEEEEET--TTTEEEEEET--T--TTEEEEEEECC------SSCCCCEEEEEE
T ss_pred             eceecEEEEEeCCHHHHHHHHHHhcCCEEEEecC--CCcEEEEEec--C--CCcEEEEeccC------CCCCCceEEEEE
Confidence            3579999999999999999999999999877642  2223333333  2  24566665431      224568999999


Q ss_pred             c--chHHhHHHHHHHHHHhCCeeecCCccCCCCCceEEEEECCCCceEEEee
Q 022818          231 D--DVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVD  280 (291)
Q Consensus       231 ~--di~~~~~~l~~~~~~~G~~~~~~~~~~~~~~~~~~~~~DpdG~~iel~~  280 (291)
                      +  |+++++++|    +++|+++. .|...++++.+.+||+|||||.|||++
T Consensus        94 ~~~dld~~~~~l----~~~G~~~~-~~~~~~~~~~~~~~~~DPdG~~iel~~  140 (141)
T 3ghj_A           94 EKSEIEPLKKAL----ESKGVSVH-GPVNQEWMQAVSLYFADPNGHALEFTA  140 (141)
T ss_dssp             CGGGHHHHHHHH----HHTTCCCE-EEEEEGGGTEEEEEEECTTCCEEEEEE
T ss_pred             eHHHHHHHHHHH----HHCCCeEe-CCcccCCCCceEEEEECCCCCEEEEEE
Confidence            7  899999999    99999988 444444434689999999999999985

>3huh_A Virulence protein STM3117; structural genomics, nysgrc, target 13955A1BCT15P1, dioxygen virulence, PSI-2, protein structure initiative; 1.50A {Salmonella enterica subsp} PDB: 3hnq_A

Probab=99.73  E-value=3.7e-17  Score=123.92  Aligned_cols=119  Identities=18%  Similarity=0.231  Sum_probs=85.9

Q ss_pred             CCceEEEeeeCChhhhHHHHHHhcCCeeeeeeccCCccceEEEeccccCCceeEEEEeeecCc---ceeecCcceeEEEE
Q 022818          152 EPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGV---TEYTKGNAYAQVAI  228 (291)
Q Consensus       152 ~~~~~v~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~---~~~~~~~~~~hi~~  228 (291)
                      .++.|+.|.|+|++++++||+++|||++....   + ++.  ++..+    ...+.+......   .......+..|++|
T Consensus        22 ~~l~hv~l~v~D~~~a~~FY~~vLG~~~~~~~---~-~~~--~l~~~----~~~l~l~~~~~~~~~~~~~~~~g~~hi~f   91 (152)
T 3huh_A           22 DRIDHLVLTVSDISTTIRFYEEVLGFSAVTFK---Q-NRK--ALIFG----AQKINLHQQEMEFEPKASRPTPGSADLCF   91 (152)
T ss_dssp             EEEEEEEEEESCHHHHHHHHHHTTCCEEEEET---T-TEE--EEEET----TEEEEEEETTBCCSSCCSSCCTTCCEEEE
T ss_pred             ceeeEEEEEeCCHHHHHHHHHhcCCCEEEEcc---C-CeE--EEEeC----CeEEEEeccCCcCCCcCcCCCCCccEEEE
Confidence            46899999999999999999999999987652   1 122  23322    234555432221   11123457789999


Q ss_pred             Eec-chHHhHHHHHHHHHHhCCeeecCCccCCCCC--ceEEEEECCCCceEEEeechhh
Q 022818          229 STD-DVYKSAEVVNLVTQELGGKITRQPGSIPGLN--TKITSFVDPDGWKTVLVDNEDF  284 (291)
Q Consensus       229 ~v~-di~~~~~~l~~~~~~~G~~~~~~~~~~~~~~--~~~~~~~DpdG~~iel~~~~~~  284 (291)
                      .++ |+++++++|    +++|+++..+|...++..  .+.+||+|||||+|||++..+.
T Consensus        92 ~~~~dl~~~~~~l----~~~G~~~~~~p~~~~~~~g~~~~~~~~DPdG~~iEl~~~~~~  146 (152)
T 3huh_A           92 ITSTPINDVVSEI----LQAGISIVEGPVERTGATGEIMSIYIRDPDGNLIEISQYVEG  146 (152)
T ss_dssp             EESSCHHHHHHHH----HHTTCCCSEEEEEEEETTEEEEEEEEECTTCCEEEEEEC---
T ss_pred             EecCCHHHHHHHH----HHCCCeEecCCccccCCCCcEEEEEEECCCCCEEEEEecccC
Confidence            997 999999999    999999888776544322  3889999999999999988664

>1twu_A Hypothetical protein YYCE; structural genomics, protein structure initiative, MCSG, DUP of the alpha-beta sandwichs. bacillus subtilis, PSI; 2.00A {Bacillus subtilis} SCOP: d.32.1.8

Probab=99.73  E-value=1.5e-16  Score=118.72  Aligned_cols=122  Identities=17%  Similarity=0.299  Sum_probs=87.2

Q ss_pred             cceeeEEEEEEeCCHHHHHHHHHhhcCCEEEEEeecCCCceeEEEEecCCCCcceEEEeeecCCCCcccCCCCceEEEEE
Q 022818           20 DKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIA   99 (291)
Q Consensus        20 ~~~~i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~~~~i~~~   99 (291)
                      |.....||.|.|+|++++++||+++|||++..+... ++.+..+++..++.  .+.+++.......+...+.+..|++|.
T Consensus         8 m~~~~~~i~l~v~Dl~~s~~FY~~~LG~~~~~~~~~-~~~~~~~~~~~~~~--~~~l~l~~~~~~~~~~~~~~~~hi~~~   84 (139)
T 1twu_A            8 FQAAQIRIARPTGQLDEIIRFYEEGLCLKRIGEFSQ-HNGYDGVMFGLPHA--DYHLEFTQYEGGSTAPVPHPDSLLVFY   84 (139)
T ss_dssp             CBCSCEEEEEECSCHHHHHHHHTTTSCCCEEEEEEE-ETTEEEEEEESSSS--SEEEEEEEETTCCCCCCCCTTCEEEEE
T ss_pred             CCcceeEEeeEeCCHHHHHHHHHhcCCcEEEEeccC-CCCeeEEEEecCCC--ceEEEEeecCCCCCCCCCCCccEEEEE
Confidence            456678899999999999999999999998765432 23345566665432  233455433222223345577899999


Q ss_pred             eCCH---HHHHHHHHHcCCeeec--CCeecCCCceEEEEEECCCCCEEEEEeCC
Q 022818          100 TEDV---YKLVENIRAKGGNVTR--EPGPLKGGTTHIAFVKDPDGYIFELIQRG  148 (291)
Q Consensus       100 v~d~---~~~~~~l~~~G~~~~~--~~~~~~~g~~~~~~~~Dp~G~~iel~~~~  148 (291)
                      |+|+   ++++++|+++|+++..  .+....+|    .||+||+||+|||++..
T Consensus        85 v~d~~~l~~~~~~l~~~G~~~~~~~~~~~~~~g----~~~~DPdG~~iel~~~~  134 (139)
T 1twu_A           85 VPNAVELAAITSKLKHMGYQEVESENPYWSNGG----VTIEDPDGWRIVFMNSK  134 (139)
T ss_dssp             CCCHHHHHHHHHHHHHTTCCEECCSSHHHHSSE----EEEECTTCCEEEEESSC
T ss_pred             eCCcchHHHHHHHHHHcCCcCcCCCCcccCCCC----eEEECCCCCEEEEEEcC
Confidence            9999   9999999999998873  32222222    26999999999999864

>1nki_A Probable fosfomycin resistance protein; potassium binding loop, manganese binding, transferase; 0.95A {Pseudomonas aeruginosa} SCOP: d.32.1.2 PDB: 1lqo_A 1lqk_A 1lqp_A 1nnr_A

Probab=99.73  E-value=2.5e-16  Score=116.87  Aligned_cols=113  Identities=23%  Similarity=0.356  Sum_probs=84.9

Q ss_pred             cceeeEEEEEEeCCHHHHHHHHHhhcCCEEEEEeecCCCceeEEEEecCCCCcceEEEeeecCCCCcccCCCCceEEEEE
Q 022818           20 DKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIA   99 (291)
Q Consensus        20 ~~~~i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~~~~i~~~   99 (291)
                      |+++|+|+.|.|+|++++.+||+++|||++.....  .    ..++..++  .  .+.+......  .....+..|++|.
T Consensus         1 Mi~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~--~----~~~~~~~~--~--~l~l~~~~~~--~~~~~~~~h~~~~   68 (135)
T 1nki_A            1 MLTGLNHLTLAVADLPASIAFYRDLLGFRLEARWD--Q----GAYLELGS--L--WLCLSREPQY--GGPAADYTHYAFG   68 (135)
T ss_dssp             CEEEEEEEEEEESCHHHHHHHHHHTTCCEEEEEET--T----EEEEEETT--E--EEEEEECTTC--CCCCSSSCEEEEE
T ss_pred             CCceEeEEEEEeCCHHHHHHHHHHhcCCEEEEcCC--C----ceEEecCC--E--EEEEEeCCCC--CCCCCCcceEEEE
Confidence            58899999999999999999999999999976532  1    23455443  1  2334333211  1233478899999


Q ss_pred             eC--CHHHHHHHHHHcCCeeecCCeecCCCceEEEEEECCCCCEEEEEeCC
Q 022818          100 TE--DVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRG  148 (291)
Q Consensus       100 v~--d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~Dp~G~~iel~~~~  148 (291)
                      |+  |+++++++|+++|+++..++..  ++ . .++++||+||.|||++..
T Consensus        69 v~~~d~~~~~~~l~~~G~~~~~~~~~--~~-~-~~~~~DPdG~~iel~~~~  115 (135)
T 1nki_A           69 IAAADFARFAAQLRAHGVREWKQNRS--EG-D-SFYFLDPDGHRLEAHVGD  115 (135)
T ss_dssp             ECHHHHHHHHHHHHHTTCCEEECCCS--SS-C-EEEEECTTCCEEEEESCC
T ss_pred             ccHHHHHHHHHHHHHCCCceecCCCC--Ce-E-EEEEECCCCCEEEEEECC
Confidence            97  9999999999999998876543  33 3 489999999999999764

>3bqx_A Glyoxalase-related enzyme; VOC superfamily, PSI-2, STRU genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; 1.40A {Fulvimarina pelagi}

Probab=99.72  E-value=5.5e-17  Score=122.77  Aligned_cols=119  Identities=23%  Similarity=0.308  Sum_probs=88.3

Q ss_pred             CcceeeEEEEEEeCCHHHHHHHHHhhcCCEEEEEeecCCCceeEEEEecCCCCcceEEEeeecCC-----CCcccCCCCc
Q 022818           19 KDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYG-----VTSYDIGTGF   93 (291)
Q Consensus        19 ~~~~~i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-----~~~~~~g~~~   93 (291)
                      +|+++|.|+.|.|+|++++++||+++|||++....   +   ...++..++  .  .+.+.....     ..+...+.+.
T Consensus         1 MM~~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~---~---~~~~~~~~~--~--~l~l~~~~~~~~~~~~~~~~~~~~   70 (150)
T 3bqx_A            1 MSLQQVAVITLGIGDLEASARFYGEGFGWAPVFRN---P---EIIFYQMNG--F--VLATWLVQNLQEDVGVAVTSRPGS   70 (150)
T ss_dssp             --CCCCCEEEEEESCHHHHHHHHHHTSCCCCSEEC---S---SEEEEECSS--S--EEEEEEHHHHHHHHSSCCCSSCCS
T ss_pred             CCccceEEEEEEcCCHHHHHHHHHHhcCCEeecCC---C---CEEEEEcCC--E--EEEEEeccccccccCCCCCCCCCe
Confidence            35689999999999999999999999999987653   1   234555432  2  233333211     0011124567


Q ss_pred             eEEEEEe---CCHHHHHHHHHHcCCeeecCCeecCCCceEEEEEECCCCCEEEEEeCC
Q 022818           94 GHFAIAT---EDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRG  148 (291)
Q Consensus        94 ~~i~~~v---~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~Dp~G~~iel~~~~  148 (291)
                      .|++|.|   +|+++++++|+++|+++..+|...++|.. .++|+||+||.|||++..
T Consensus        71 ~~l~f~v~~~~dv~~~~~~l~~~G~~~~~~~~~~~~g~~-~~~~~DPdG~~iel~~~~  127 (150)
T 3bqx_A           71 MALAHNVRAETEVAPLMERLVAAGGQLLRPADAPPHGGL-RGYVADPDGHIWEIAFNP  127 (150)
T ss_dssp             CEEEEECSSGGGHHHHHHHHHHTTCEEEEEEECCTTSSE-EEEEECTTCCEEEEEECT
T ss_pred             EEEEEEeCCHHHHHHHHHHHHHCCCEEecCCcccCCCCE-EEEEECCCCCEEEEEeCC
Confidence            8999999   89999999999999998887777777654 489999999999999874

>1twu_A Hypothetical protein YYCE; structural genomics, protein structure initiative, MCSG, DUP of the alpha-beta sandwichs. bacillus subtilis, PSI; 2.00A {Bacillus subtilis} SCOP: d.32.1.8

Probab=99.72  E-value=5.5e-17  Score=121.10  Aligned_cols=119  Identities=20%  Similarity=0.341  Sum_probs=85.3

Q ss_pred             CceEEEeeeCChhhhHHHHHHhcCCeeeeeeccCCccceEEEeccccCCceeEEEEeeecCcceeecCcceeEEEEEecc
Q 022818          153 PLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDD  232 (291)
Q Consensus       153 ~~~~v~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~hi~~~v~d  232 (291)
                      .+.++.|.|+|++++++||+++|||++...... ++++..++++.+..  ...+++....+..+...+.+..|++|.|+|
T Consensus        11 ~~~~i~l~v~Dl~~s~~FY~~~LG~~~~~~~~~-~~~~~~~~~~~~~~--~~~l~l~~~~~~~~~~~~~~~~hi~~~v~d   87 (139)
T 1twu_A           11 AQIRIARPTGQLDEIIRFYEEGLCLKRIGEFSQ-HNGYDGVMFGLPHA--DYHLEFTQYEGGSTAPVPHPDSLLVFYVPN   87 (139)
T ss_dssp             SCEEEEEECSCHHHHHHHHTTTSCCCEEEEEEE-ETTEEEEEEESSSS--SEEEEEEEETTCCCCCCCCTTCEEEEECCC
T ss_pred             ceeEEeeEeCCHHHHHHHHHhcCCcEEEEeccC-CCCeeEEEEecCCC--ceEEEEeecCCCCCCCCCCCccEEEEEeCC
Confidence            467888999999999999999999998765432 23355666664332  345666554433222344567899999999


Q ss_pred             h---HHhHHHHHHHHHHhCCeeec--CCccCCCCCceEEEEECCCCceEEEeech
Q 022818          233 V---YKSAEVVNLVTQELGGKITR--QPGSIPGLNTKITSFVDPDGWKTVLVDNE  282 (291)
Q Consensus       233 i---~~~~~~l~~~~~~~G~~~~~--~~~~~~~~~~~~~~~~DpdG~~iel~~~~  282 (291)
                      +   ++++++|    +++|+++..  .|.....  +  .||+|||||+|||++..
T Consensus        88 ~~~l~~~~~~l----~~~G~~~~~~~~~~~~~~--g--~~~~DPdG~~iel~~~~  134 (139)
T 1twu_A           88 AVELAAITSKL----KHMGYQEVESENPYWSNG--G--VTIEDPDGWRIVFMNSK  134 (139)
T ss_dssp             HHHHHHHHHHH----HHTTCCEECCSSHHHHSS--E--EEEECTTCCEEEEESSC
T ss_pred             cchHHHHHHHH----HHcCCcCcCCCCcccCCC--C--eEEECCCCCEEEEEEcC
Confidence            8   8888888    999999873  3322222  2  37999999999999864

>1r9c_A Glutathione transferase; fosfomycin resistance protein, Mn binding, antibiotic resist transferase; 1.83A {Mesorhizobium loti} SCOP: d.32.1.2

Probab=99.72  E-value=9.4e-17  Score=119.80  Aligned_cols=116  Identities=19%  Similarity=0.244  Sum_probs=83.1

Q ss_pred             CceEEEeeeCChhhhHHHHHHhcCCeeeeeeccCCccceE---EEeccccCCceeEEEEeeecCcceeecCcceeEEEEE
Q 022818          153 PLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTL---AMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAIS  229 (291)
Q Consensus       153 ~~~~v~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~hi~~~  229 (291)
                      ++.|+.|.|+|++++.+||+++|||++......  ..+..   .++..+    +..+.+......    ...+..|++|.
T Consensus         4 ~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~--~~~~~~~~~~~~~g----~~~l~l~~~~~~----~~~~~~h~~~~   73 (139)
T 1r9c_A            4 GLSHMTFIVRDLERMTRILEGVFDAREVYASDT--EQFSLSREKFFLIG----DIWVAIMQGEKL----AERSYNHIAFK   73 (139)
T ss_dssp             EEEEEEEEESCHHHHHHHHHHHHCCEEEEEGGG--STTCCSCEEEEEET----TEEEEEEECCCC----SSCCSCEEEEE
T ss_pred             eEEEEEEEeCCHHHHHHHHHHhhCCEEeecCCC--ccccccceEEEEEC----CEEEEEEeCCCC----CCCCeeEEEEE
Confidence            589999999999999999999999998765321  11110   022221    245666542211    13577899999


Q ss_pred             ec--chHHhHHHHHHHHHHhCCeeecCCccCCCCCceEEEEECCCCceEEEeechh
Q 022818          230 TD--DVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNED  283 (291)
Q Consensus       230 v~--di~~~~~~l~~~~~~~G~~~~~~~~~~~~~~~~~~~~~DpdG~~iel~~~~~  283 (291)
                      |+  |+++++++|    +++|+++..+|...++ +.+.+||+|||||.|||++...
T Consensus        74 v~~~d~~~~~~~l----~~~G~~~~~~~~~~~~-~~~~~~~~DPdG~~iel~~~~~  124 (139)
T 1r9c_A           74 IDDADFDRYAERV----GKLGLDMRPPRPRVEG-EGRSIYFYDDDNHMFELHTGTL  124 (139)
T ss_dssp             CCGGGHHHHHHHH----HHHTCCBCCCCC------CCEEEEECTTSCEEEEECCCH
T ss_pred             cCHHHHHHHHHHH----HHCCCcccCCcccCCC-CeEEEEEECCCCCEEEEEeCCh
Confidence            99  999999999    9999998877666554 4589999999999999998643

>2r6u_A Uncharacterized protein; structural genomics, PSI-2, RHA04853, MCSG, protein structur initiative, midwest center for structural genomics; 1.50A {Rhodococcus SP}

Probab=99.72  E-value=8.8e-17  Score=121.35  Aligned_cols=116  Identities=21%  Similarity=0.306  Sum_probs=85.1

Q ss_pred             CcceeeEEEEEEeCCHHHHHHHHHhhcCCEEEEEeecCCCceeEEEEecCCCCcceE--------EEeeecCCCCcccCC
Q 022818           19 KDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFV--------VELTYNYGVTSYDIG   90 (291)
Q Consensus        19 ~~~~~i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------l~~~~~~~~~~~~~g   90 (291)
                      .|..+|.|+.|.|+|++++++||+++|||++...   ++..  ..++..++....+.        ..+....      ..
T Consensus        21 gM~~~i~hv~l~v~Dl~~a~~FY~~vLG~~~~~~---~~~~--~~~~~~~~~~~~l~~~~~~~~~~~l~~~~------~~   89 (148)
T 2r6u_A           21 GMTGRIVHFEIPFDDGDRARAFYRDAFGWAIAEI---PDMD--YSMVTTGPVGESGMPDEPGYINGGMMQRG------EV   89 (148)
T ss_dssp             TTCCCEEEEEEEESSHHHHHHHHHHHHCCEEEEE---TTTT--EEEEECSCBCTTSSBCSSSCBCEEEEESS------SS
T ss_pred             ccCCceEEEEEEeCCHHHHHHHHHHccCcEEEEC---CCCC--EEEEEeCCcceeecccCCcccccceeecC------CC
Confidence            3567999999999999999999999999998763   1222  34455444322221        1111110      01


Q ss_pred             CCceEEEEEeCCHHHHHHHHHHcCCeeecCCeecC-CCceEEEEEECCCCCEEEEEeCC
Q 022818           91 TGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLK-GGTTHIAFVKDPDGYIFELIQRG  148 (291)
Q Consensus        91 ~~~~~i~~~v~d~~~~~~~l~~~G~~~~~~~~~~~-~g~~~~~~~~Dp~G~~iel~~~~  148 (291)
                      .+ .|++|.|+|+++++++|+++|+++..+|...+ +|  +.++|+||+||+|||++..
T Consensus        90 ~g-~~l~f~v~dld~~~~~l~~~G~~~~~~~~~~~~~g--~~~~~~DPdG~~iel~~~~  145 (148)
T 2r6u_A           90 TT-PVVTVDVESIESALERIESLGGKTVTGRTPVGNMG--FAAYFTDSEGNVVGLWETA  145 (148)
T ss_dssp             CS-CEEEEECSCHHHHHHHHHHTTCEEEEEEEEETTTE--EEEEEECTTSCEEEEEEEC
T ss_pred             Ce-EEEEEEcCCHHHHHHHHHHcCCeEecCCeecCCCE--EEEEEECCCCCEEEEEecC
Confidence            24 49999999999999999999999888777666 34  4589999999999999865

>3itw_A Protein TIOX; bleomycin resistance fold, bisintercalator, solvent-exposed residue, thiocoraline, protein binding, peptide binding Pro; 2.15A {Micromonospora SP}

Probab=99.72  E-value=2.9e-16  Score=116.79  Aligned_cols=119  Identities=18%  Similarity=0.189  Sum_probs=86.9

Q ss_pred             EEEEEEeCCHHHHHHHHHhhcCCEEEEEeecCCCceeEEEEecCCCCcceEEEeeecCCC-CcccCCCCce-EEEEEeCC
Q 022818           25 LHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGV-TSYDIGTGFG-HFAIATED  102 (291)
Q Consensus        25 ~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~~~~~g~~~~-~i~~~v~d  102 (291)
                      ..+.|.|+|++++++||+++|||++..+...+ +......+..++  ..  +.+...... .....+.... |++|.|+|
T Consensus         4 ~~i~l~v~D~~~a~~FY~~~lG~~~~~~~~~~-g~~~~~~l~~~~--~~--l~l~~~~~~~~~~~~~~~~~~~~~~~v~d   78 (137)
T 3itw_A            4 MVVELAYTDPDRAVDWLVRVFGFRLLLRQPAI-GTIRHADLDTGG--GI--VMVRRTGEPYTVSCAGGHTCKQVIVWVSD   78 (137)
T ss_dssp             CEEEEEESCHHHHHHHHHHHHCCEEEEEESSS-SSCSEEEEECSS--SE--EEEEETTCCSSCEECCCCCCCEEEEEESC
T ss_pred             EEEEEEECCHHHHHHHHHHccCCEEEEEecCC-CcEEEEEEecCC--eE--EEEEecCCCcCccCCCCCcEEEEEEEeCC
Confidence            47899999999999999999999998765543 333345555443  22  333222111 1111222334 99999999


Q ss_pred             HHHHHHHHHHcCCeeecCCeecCCCceEEEEEECCCCCEEEEEeCCC
Q 022818          103 VYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRGP  149 (291)
Q Consensus       103 ~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~Dp~G~~iel~~~~~  149 (291)
                      +++++++|+++|+++..+|...++|.+ .++|+||+||.|+|++...
T Consensus        79 v~~~~~~l~~~G~~~~~~~~~~~~g~~-~~~~~DPdG~~iel~~~~~  124 (137)
T 3itw_A           79 VDEHFMRSTAAGADIVQPLQDKPWGLR-QYLVRDLEGHLWEFTRHLR  124 (137)
T ss_dssp             HHHHHHHHHHTTCEEEEEEEEETTTEE-EEEEECSSSCEEEEEECC-
T ss_pred             HHHHHHHHHHcCCeeccCccccCCCcE-EEEEECCCCCEEEEEEEcC
Confidence            999999999999999888888887765 4899999999999999764

>1npb_A Fosfomycin-resistance protein; manganese binding, potassium binding loop, transferase; 2.50A {Serratia marcescens} SCOP: d.32.1.2

Probab=99.72  E-value=3.4e-16  Score=117.01  Aligned_cols=115  Identities=22%  Similarity=0.352  Sum_probs=85.3

Q ss_pred             cceeeEEEEEEeCCHHHHHHHHHhhcCCEEEEEeecCCCceeEEEEecCCCCcceEEEeeecCCC-CcccCCCCceEEEE
Q 022818           20 DKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGV-TSYDIGTGFGHFAI   98 (291)
Q Consensus        20 ~~~~i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~~~~~g~~~~~i~~   98 (291)
                      |+++|+|+.|.|+|++++.+||+++|||++.....  .    ..++..++  .  .+.+...... .......+..|++|
T Consensus         1 Mi~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~--~----~~~~~~~~--~--~l~l~~~~~~~~~~~~~~~~~hi~~   70 (141)
T 1npb_A            1 MLQSLNHLTLAVSDLQKSVTFWHELLGLTLHARWN--T----GAYLTCGD--L--WVCLSYDEARQYVPPQESDYTHYAF   70 (141)
T ss_dssp             CCCEEEEEEEEESCHHHHHHHHHTTSCCEEEEEET--T----EEEEEETT--E--EEEEEECTTCCCCCGGGSCSCEEEE
T ss_pred             CCceEEEEEEEeCCHHHHHHHHHhccCCEEEeecC--C----cEEEEECC--E--EEEEEECCCCCCCCCCCCCceEEEE
Confidence            57899999999999999999999999999976542  1    24455443  2  2333332211 11123457889999


Q ss_pred             EeC--CHHHHHHHHHHcCCeeecCCeecCCCceEEEEEECCCCCEEEEEeCC
Q 022818           99 ATE--DVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRG  148 (291)
Q Consensus        99 ~v~--d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~Dp~G~~iel~~~~  148 (291)
                      .|+  |+++++++|+++|+++..++..   +.. .++++||+||.|||++..
T Consensus        71 ~v~~~d~~~~~~~l~~~G~~~~~~~~~---~~~-~~~~~DPdG~~iel~~~~  118 (141)
T 1npb_A           71 TVAEEDFEPLSQRLEQAGVTIWKQNKS---EGA-SFYFLDPDGHKLELHVGS  118 (141)
T ss_dssp             ECCHHHHHHHHHHHHHTTCCEEECCCS---SSE-EEEEECTTCCEEEEEECC
T ss_pred             EeCHHHHHHHHHHHHHCCCeEeccCCC---cee-EEEEECCCCCEEEEEECc
Confidence            996  9999999999999998776542   333 489999999999999865

>2a4x_A Mitomycin-binding protein; ALFA/beta protein, mitomycin C-binding protein, bleomycin A2, antimicrobial protein; HET: BLM; 1.40A {Streptomyces caespitosus} SCOP: d.32.1.2 PDB: 2a4w_A* 1kmz_A 1kll_A*

Probab=99.72  E-value=9.1e-17  Score=119.72  Aligned_cols=120  Identities=18%  Similarity=0.148  Sum_probs=87.5

Q ss_pred             cceeeEEEEEEeCCHHHHHHHHHhhcCCEEEEEeecCCCceeEEEEecCCCCcceEEEeeecC------CCCcccCCCCc
Q 022818           20 DKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNY------GVTSYDIGTGF   93 (291)
Q Consensus        20 ~~~~i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~------~~~~~~~g~~~   93 (291)
                      |++++.|+.|.|+|++++++||++ |||++..+.+  ...  ...+..++ ..  .+.+....      .......+.+.
T Consensus         1 M~~~l~hv~l~v~D~~~a~~FY~~-LG~~~~~~~~--~~~--~~~~~~~~-~~--~l~l~~~~~~~~~~~~~~~~~~~~~   72 (138)
T 2a4x_A            1 MSARISLFAVVVEDMAKSLEFYRK-LGVEIPAEAD--SAP--HTEAVLDG-GI--RLAWDTVETVRSYDPEWQAPTGGHR   72 (138)
T ss_dssp             -CCEEEEEEEEESCHHHHHHHHHT-TTCCCCGGGG--GCS--EEEEECTT-SC--EEEEEEHHHHHHHCTTCCCCBSSCS
T ss_pred             CcceeeEEEEEECCHHHHHHHHHH-cCCcEEecCC--CCc--eEEEEcCC-Ce--EEEEecCccchhhCcccCCCCCCCe
Confidence            468999999999999999999999 9999865432  111  23343322 22  23333211      11111234578


Q ss_pred             eEEEEEeC---CHHHHHHHHHHcCCeeecCCeecCCCceEEEEEECCCCCEEEEEeCC
Q 022818           94 GHFAIATE---DVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRG  148 (291)
Q Consensus        94 ~~i~~~v~---d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~Dp~G~~iel~~~~  148 (291)
                      .|++|.|+   |+++++++|+++|+++..+|...++|.+ .++|+||+||.|||++..
T Consensus        73 ~~l~f~v~~~~dv~~~~~~l~~~G~~~~~~~~~~~~g~~-~~~~~DPdG~~iel~~~~  129 (138)
T 2a4x_A           73 FAIAFEFPDTASVDKKYAELVDAGYEGHLKPWNAVWGQR-YAIVKDPDGNVVDLFAPL  129 (138)
T ss_dssp             EEEEEECSSHHHHHHHHHHHHHTTCCEEEEEEEETTTEE-EEEEECTTCCEEEEEEEC
T ss_pred             EEEEEEeCCHHHHHHHHHHHHHCCCceeeCCcccCCCcE-EEEEECCCCCEEEEEeCC
Confidence            89999999   9999999999999998888887777744 489999999999999876

>2p7o_A Glyoxalase family protein; fosfomycin resistance protein, Mn binding, antibiotic resist metal binding protein, hydrolase; 1.44A {Listeria monocytogenes} PDB: 2p7k_A 2p7l_A 2p7m_A 2p7p_A 2p7q_A

Probab=99.72  E-value=1.3e-16  Score=117.99  Aligned_cols=117  Identities=16%  Similarity=0.250  Sum_probs=84.5

Q ss_pred             CCceEEEeeeCChhhhHHHHHHhcCCeeeeeeccCCccceE---EEeccccCCceeEEEEeeecCcceeecCcceeEEEE
Q 022818          152 EPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTL---AMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAI  228 (291)
Q Consensus       152 ~~~~~v~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~hi~~  228 (291)
                      .++.|+.|.|+|++++.+||+++|||++....+  +..+..   .++..+    +..+.+......    .+.+..|++|
T Consensus         3 ~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~--~~~~~~~~~~~~~~~----~~~l~l~~~~~~----~~~~~~h~~~   72 (133)
T 2p7o_A            3 SGLSHITLIVKDLNKTTAFLQNIFNAEEIYSSG--DKTFSLSKEKFFLIA----GLWICIMEGDSL----QERTYNHIAF   72 (133)
T ss_dssp             CEEEEEEEEESCHHHHHHHHHHHHCCEECC-------CCCSSCEEEEEET----TEEEEEEECSSC----CCCCSCEEEE
T ss_pred             ceEEEEEEEcCCHHHHHHHHHHhcCCEEeeecC--CcccccCCceEEEeC----CEEEEEecCCCC----CCCCeeEEEE
Confidence            468999999999999999999999999875432  111110   022221    245555442221    1457789999


Q ss_pred             Ee--cchHHhHHHHHHHHHHhCCeeecCCccCCCCCceEEEEECCCCceEEEeechh
Q 022818          229 ST--DDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNED  283 (291)
Q Consensus       229 ~v--~di~~~~~~l~~~~~~~G~~~~~~~~~~~~~~~~~~~~~DpdG~~iel~~~~~  283 (291)
                      .|  +|+++++++|    +++|+++..+|...++ +++.+||+|||||.|||++...
T Consensus        73 ~v~~~d~~~~~~~l----~~~G~~~~~~~~~~~~-~~~~~~~~DPdG~~iel~~~~~  124 (133)
T 2p7o_A           73 QIQSEEVDEYTERI----KALGVEMKPERPRVQG-EGRSIYFYDFDNHLFELHAGTL  124 (133)
T ss_dssp             ECCGGGHHHHHHHH----HHHTCCEECCCCCCTT-CCCEEEEECSSSCEEEEECSSC
T ss_pred             EcCHHHHHHHHHHH----HHCCCcccCCCccCCC-CeeEEEEECCCCCEEEEEcCCh
Confidence            99  4899999999    9999999888766544 3588999999999999998754

>2qqz_A Glyoxalase family protein, putative; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; HET: MSE; 1.92A {Bacillus anthracis str}

Probab=99.71  E-value=9.7e-17  Score=117.59  Aligned_cols=115  Identities=11%  Similarity=0.117  Sum_probs=84.2

Q ss_pred             CCceEEEeee--CChhhhHHHHHHhcCCeeeeeeccCCccceEEEeccccCCceeEEEEeeecCcceeecCcceeEEEEE
Q 022818          152 EPLCQVMLRV--GDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAIS  229 (291)
Q Consensus       152 ~~~~~v~l~v--~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~hi~~~  229 (291)
                      .++.|+.|.|  +|++++.+||+++|||++.......... ...++..+    ...+.+.....    ..+.+..|++|.
T Consensus         9 ~~i~hv~l~v~~~D~~~a~~FY~~~lG~~~~~~~~~~~~~-~~~~~~~~----~~~l~l~~~~~----~~~~~~~~~~f~   79 (126)
T 2qqz_A            9 QGIDHVQVAAPVGCEEEARAFYGETIGMEEIPKPEELKKR-GGCWFKCG----NQEIHIGVEQN----FNPAKRAHPAFY   79 (126)
T ss_dssp             EEEEEEEEEECTTTHHHHHHHHTTTTCCEEECCCGGGGGG-CCEEEEET----TEEEEEEECTT----CCCCSSSCEEEE
T ss_pred             ceeeeEEEEcccccHHHHHHHHHhcCCCEEecCcccccCC-CceEEEeC----CEEEEEEecCC----CCCCCceEEEEE
Confidence            3689999999  8999999999999999987653221000 11223322    23455544321    123467899999


Q ss_pred             ecchHHhHHHHHHHHHHhCCeeecCCccCCCCCceEEEEECCCCceEEEeech
Q 022818          230 TDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNE  282 (291)
Q Consensus       230 v~di~~~~~~l~~~~~~~G~~~~~~~~~~~~~~~~~~~~~DpdG~~iel~~~~  282 (291)
                      |+|+++++++|    +++|+++..+|. .  .+.+.+||+|||||.|||+++.
T Consensus        80 v~d~~~~~~~l----~~~G~~~~~~~~-~--~g~~~~~~~DPdG~~iel~~~~  125 (126)
T 2qqz_A           80 VLKIDEFKQEL----IKQGIEVIDDHA-R--PDVIRFYVSDPFGNRIEFMENK  125 (126)
T ss_dssp             ETTHHHHHHHH----HHTTCCCEEECS-S--TTEEEEEEECTTSCEEEEEEEC
T ss_pred             cCCHHHHHHHH----HHcCCCccCCCC-C--CCeeEEEEECCCCCEEEEEeCC
Confidence            99999999999    999999887773 2  2468899999999999999863

>1xrk_A Bleomycin resistance protein; arm exchange, ligand binding protein, thermostable mutant, antibiotic inhibitor; HET: BLM; 1.50A {Streptoalloteichus hindustanus} SCOP: d.32.1.2 PDB: 2zhp_A* 1byl_A

Probab=99.71  E-value=4.2e-16  Score=113.91  Aligned_cols=112  Identities=12%  Similarity=0.068  Sum_probs=84.4

Q ss_pred             ceeeEEEEEEeCCHHHHHHHHHhhcCCEEEEEeecCCCceeEEEEecCCCCcceEEEeeecCCCCcccCCCCceEEEEEe
Q 022818           21 KRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIAT  100 (291)
Q Consensus        21 ~~~i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~~~~i~~~v  100 (291)
                      .....|+.|.|+|++++.+||+++|||++....   + .  ..++..++    ..+.+......    ...+..|++|.|
T Consensus         3 ~~~~~~~~l~v~D~~~a~~FY~~~lG~~~~~~~---~-~--~~~~~~~~----~~l~l~~~~~~----~~~~~~~~~~~v   68 (124)
T 1xrk_A            3 KLTSAVPVLTARDVAEAVEFWTDRLGFSRVFVE---D-D--FAGVVRDD----VTLFISAVQDQ----VVPDNTQAWVWV   68 (124)
T ss_dssp             EEEEEEEEEEESCHHHHHHHHHHTTCCEEEEEC---S-S--EEEEEETT----EEEEEEECSCT----TTGGGCEEEEEE
T ss_pred             cccceeEEEEcCCHHHHHHHHHHccCceEEecC---C-C--EEEEEECC----EEEEEEcCCCC----CCCCceEEEEEE
Confidence            456689999999999999999999999997651   1 1  34454432    22333332211    112446999999


Q ss_pred             CCHHHHHHHHHHc------CC--eeecCCeecCCCceEEEEEECCCCCEEEEEeCC
Q 022818          101 EDVYKLVENIRAK------GG--NVTREPGPLKGGTTHIAFVKDPDGYIFELIQRG  148 (291)
Q Consensus       101 ~d~~~~~~~l~~~------G~--~~~~~~~~~~~g~~~~~~~~Dp~G~~iel~~~~  148 (291)
                      +|+++++++|+++      |+  ++..+|...++|  +.++++||+||.|+|.+..
T Consensus        69 ~dv~~~~~~l~~~~~~~~~G~~~~~~~~~~~~~~g--~~~~~~DPdG~~iel~~~~  122 (124)
T 1xrk_A           69 RGLDELYAEWSEVVSTNFRDASGPAMTEIVEQPWG--REFALRDPAGNCVHFVAEE  122 (124)
T ss_dssp             ECHHHHHHHHTTTSBSCTTTCSSCEECCCEEETTE--EEEEEECTTCCEEEEEEC-
T ss_pred             CCHHHHHHHHHHhcccccCCccccccCCceecCCC--CEEEEECCCCCEEEEEEec
Confidence            9999999999999      99  888888888877  4589999999999999864

>2kjz_A ATC0852; protein of unknown function, dimer, structural genomics, PSI protein structure initiative; NMR {Agrobacterium tumefaciens}

Probab=99.71  E-value=7.9e-17  Score=121.03  Aligned_cols=116  Identities=17%  Similarity=0.163  Sum_probs=85.8

Q ss_pred             CCceEEEeeeCChhhhHHHHHHhcCCeeeeeeccCCccceEEEeccccCCceeEEEEeeecCccee-ecCcceeEEEEEe
Q 022818          152 EPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEY-TKGNAYAQVAIST  230 (291)
Q Consensus       152 ~~~~~v~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~-~~~~~~~hi~~~v  230 (291)
                      .++.|+.|.|+|++++.+||+++|||++....+    .+..  +..++   ...|.+.......+. ..+.+..|++|.|
T Consensus        24 ~~l~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~~----~~~~--~~~~~---~~~l~l~~~~~~~~~~~~~~~~~hl~f~v   94 (144)
T 2kjz_A           24 THPDFTILYVDNPPASTQFYKALLGVDPVESSP----TFSL--FVLAN---GMKLGLWSRHTVEPKASVTGGGGELAFRV   94 (144)
T ss_dssp             CCCCEEEEEESCHHHHHHHHHHHHTCCCSEEET----TEEE--EECTT---SCEEEEEETTSCSSCCCCSSSSCEEEEEC
T ss_pred             CceeEEEEEeCCHHHHHHHHHHccCCEeccCCC----CeEE--EEcCC---CcEEEEEeCCCCCCccCCCCCceEEEEEe
Confidence            479999999999999999999999999876541    2333  33222   244555433221111 2235778999999


Q ss_pred             c---chHHhHHHHHHHHHHhCCeeecCCccCCCCCceEEEEECCCCceEEEeech
Q 022818          231 D---DVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNE  282 (291)
Q Consensus       231 ~---di~~~~~~l~~~~~~~G~~~~~~~~~~~~~~~~~~~~~DpdG~~iel~~~~  282 (291)
                      +   |+++++++|    +++|+++..+|...++  ++.+||+|||||.|||++..
T Consensus        95 ~d~~dv~~~~~~l----~~~G~~~~~~~~~~~~--g~~~~~~DPdG~~iel~~~~  143 (144)
T 2kjz_A           95 ENDAQVDETFAGW----KASGVAMLQQPAKMEF--GYTFTAADPDSHRLRVYAFA  143 (144)
T ss_dssp             SSHHHHHHHHHHH----HHTTCCCCSCCEEETT--EEEEEECCTTCCEEEEEEEC
T ss_pred             CCHHHHHHHHHHH----HHCCCeEecCceecCC--ceEEEEECCCCCEEEEEecC
Confidence            7   478888888    9999999888877666  38899999999999999864

>3fcd_A Lyase, ORF125EGC139; lactoylglutathione lyase, YECM, PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.92A {Uncultured bacterium} SCOP: d.32.1.0

Probab=99.71  E-value=1.1e-16  Score=118.79  Aligned_cols=121  Identities=15%  Similarity=0.125  Sum_probs=83.2

Q ss_pred             CceEEEeeeCChhhhHHHHHHhcCCeeeeeeccCCccceEEEeccccCCceeEEEEeeecCcceeecCcceeEEEEEecc
Q 022818          153 PLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDD  232 (291)
Q Consensus       153 ~~~~v~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~hi~~~v~d  232 (291)
                      .-.+..|.|+|++++++||+++|||++....+      ...++..+    ...+.+.........+.+.+..|++|.|+|
T Consensus         7 ~~~~~~l~v~D~~~a~~FY~~~LG~~~~~~~~------~~~~l~~~----~~~l~l~~~~~~~~~~~~~~~~~l~~~v~d   76 (134)
T 3fcd_A            7 HQITPFLHIPDMQEALTLFCDTLGFELKYRHS------NYAYLELS----GCGLRLLEEPARKIIPDGIARVAICIDVSD   76 (134)
T ss_dssp             CEEEEEEEESCHHHHHHHHTTTTCCEEEEEET------TEEEEEET----TEEEEEEECCCC---------EEEEEECSC
T ss_pred             hcceeEEEECCHHHHHHHHHhccCcEEEEeCC------CeEEEEEC----CEEEEEEeCCCCCcCCCCCceEEEEEEeCC
Confidence            34567899999999999999999999876532      12334322    345666554332211222345799999999


Q ss_pred             hHHhHHHHHHHHHHhCCeeecCCccCCCCCceEEEEECCCCceEEEeechhh
Q 022818          233 VYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNEDF  284 (291)
Q Consensus       233 i~~~~~~l~~~~~~~G~~~~~~~~~~~~~~~~~~~~~DpdG~~iel~~~~~~  284 (291)
                      +++++++|.++..+.|+++..+|...++ +.+.++|+|||||.|||.+....
T Consensus        77 v~~~~~~l~~~g~~~g~~i~~~~~~~~~-g~~~~~~~DPdG~~iel~~~~~~  127 (134)
T 3fcd_A           77 IDSLHTKLSPALENLPADQVEPLKNMPY-GQREFQVRMPDGDWLNFTAPLAE  127 (134)
T ss_dssp             HHHHHHHHHHHHTTSCGGGEEEEEECTT-SEEEEEEECTTSCEEEEEEECCT
T ss_pred             HHHHHHHHHhcCCccCCccccCCcccCC-CcEEEEEECCCCCEEEEEEcccc
Confidence            9999999933333455667777777776 45899999999999999987553

>2pjs_A AGR_C_3564P, uncharacterized protein ATU1953; glyoxalase/bleomycin resistance protein/dioxygenase superfamily, structural genomics; 1.85A {Agrobacterium tumefaciens str} SCOP: d.32.1.2

Probab=99.70  E-value=9.9e-17  Score=116.23  Aligned_cols=111  Identities=14%  Similarity=0.157  Sum_probs=82.9

Q ss_pred             CceEEEeeeCChhhhHHHHHHhcCCeeeeeeccCCccceEEEeccccCCceeEEEEeeecCcceeecCcceeEEEEEecc
Q 022818          153 PLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDD  232 (291)
Q Consensus       153 ~~~~v~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~hi~~~v~d  232 (291)
                      .+ |+.|.|+|++++.+||+++|||++....    + . ...+..+.. ....+.+....     ...++..|++|.|+|
T Consensus         8 ~i-~v~l~v~d~~~a~~FY~~~lG~~~~~~~----~-~-~~~~~~~~~-~~~~l~l~~~~-----~~~~~~~~~~~~v~d   74 (119)
T 2pjs_A            8 RV-VANIATPEPARAQAFYGDILGMPVAMDH----G-W-IVTHASPLE-AHAQVSFAREG-----GSGTDVPDLSIEVDN   74 (119)
T ss_dssp             EE-EEEEECSCGGGGHHHHTTTTCCCEEEEC----S-S-EEEEEEEEE-EEEEEEEESSS-----BTTBCCCSEEEEESC
T ss_pred             EE-EEEEEcCCHHHHHHHHHHhcCCEEEecC----C-E-EEEEecCCC-CcEEEEEEcCC-----CCCCceeEEEEEECC
Confidence            46 9999999999999999999999987531    1 1 222332111 12345443221     123456899999999


Q ss_pred             hHHhHHHHHHHHHHhCCeeecCCccCCCCCceEEEEECCCCceEEEeec
Q 022818          233 VYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDN  281 (291)
Q Consensus       233 i~~~~~~l~~~~~~~G~~~~~~~~~~~~~~~~~~~~~DpdG~~iel~~~  281 (291)
                      +++++++|    +++|+++..+|...++ +.+.+|++|||||.|||++.
T Consensus        75 ~~~~~~~l----~~~G~~~~~~~~~~~~-g~~~~~~~DPdG~~iel~~~  118 (119)
T 2pjs_A           75 FDEVHARI----LKAGLPIEYGPVTEAW-GVQRLFLRDPFGKLINILSH  118 (119)
T ss_dssp             HHHHHHHH----HHTTCCCSEEEEECTT-SCEEEEEECTTSCEEEEEEC
T ss_pred             HHHHHHHH----HHCCCccccCCccCCC-ccEEEEEECCCCCEEEEEec
Confidence            99999999    9999999888877775 35899999999999999975

>3bqx_A Glyoxalase-related enzyme; VOC superfamily, PSI-2, STRU genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; 1.40A {Fulvimarina pelagi}

Probab=99.70  E-value=1.3e-16  Score=120.63  Aligned_cols=117  Identities=20%  Similarity=0.217  Sum_probs=88.0

Q ss_pred             CCceEEEeeeCChhhhHHHHHHhcCCeeeeeeccCCccceEEEeccccCCceeEEEEeeecCcc-----eeecCcceeEE
Q 022818          152 EPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVT-----EYTKGNAYAQV  226 (291)
Q Consensus       152 ~~~~~v~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~-----~~~~~~~~~hi  226 (291)
                      .++.|+.|.|+|++++.+||+++|||++....    .  ...++..+    +..+.+.......     +...+.+..|+
T Consensus         4 ~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~----~--~~~~~~~~----~~~l~l~~~~~~~~~~~~~~~~~~~~~~l   73 (150)
T 3bqx_A            4 QQVAVITLGIGDLEASARFYGEGFGWAPVFRN----P--EIIFYQMN----GFVLATWLVQNLQEDVGVAVTSRPGSMAL   73 (150)
T ss_dssp             CCCCEEEEEESCHHHHHHHHHHTSCCCCSEEC----S--SEEEEECS----SSEEEEEEHHHHHHHHSSCCCSSCCSCEE
T ss_pred             cceEEEEEEcCCHHHHHHHHHHhcCCEeecCC----C--CEEEEEcC----CEEEEEEeccccccccCCCCCCCCCeEEE
Confidence            46899999999999999999999999987553    1  22333322    3455665432110     10124567899


Q ss_pred             EEEe---cchHHhHHHHHHHHHHhCCeeecCCccCCCCCceEEEEECCCCceEEEeechh
Q 022818          227 AIST---DDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNED  283 (291)
Q Consensus       227 ~~~v---~di~~~~~~l~~~~~~~G~~~~~~~~~~~~~~~~~~~~~DpdG~~iel~~~~~  283 (291)
                      +|.|   +|+++++++|    +++|+++..+|...++ +.+.+||+|||||.|||++...
T Consensus        74 ~f~v~~~~dv~~~~~~l----~~~G~~~~~~~~~~~~-g~~~~~~~DPdG~~iel~~~~~  128 (150)
T 3bqx_A           74 AHNVRAETEVAPLMERL----VAAGGQLLRPADAPPH-GGLRGYVADPDGHIWEIAFNPV  128 (150)
T ss_dssp             EEECSSGGGHHHHHHHH----HHTTCEEEEEEECCTT-SSEEEEEECTTCCEEEEEECTT
T ss_pred             EEEeCCHHHHHHHHHHH----HHCCCEEecCCcccCC-CCEEEEEECCCCCEEEEEeCCC
Confidence            9999   8899999999    9999999888877765 3589999999999999998754

>2a4x_A Mitomycin-binding protein; ALFA/beta protein, mitomycin C-binding protein, bleomycin A2, antimicrobial protein; HET: BLM; 1.40A {Streptomyces caespitosus} SCOP: d.32.1.2 PDB: 2a4w_A* 1kmz_A 1kll_A*

Probab=99.70  E-value=9.6e-17  Score=119.59  Aligned_cols=120  Identities=18%  Similarity=0.141  Sum_probs=87.9

Q ss_pred             CCceEEEeeeCChhhhHHHHHHhcCCeeeeeeccCCccceEEEeccccCCceeEEEEeeecC------cceeecCcceeE
Q 022818          152 EPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYG------VTEYTKGNAYAQ  225 (291)
Q Consensus       152 ~~~~~v~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~------~~~~~~~~~~~h  225 (291)
                      .++.|+.|.|+|++++++||++ |||++.....  +..+  ..+..++   ...+.+.....      ......+.+..|
T Consensus         3 ~~l~hv~l~v~D~~~a~~FY~~-LG~~~~~~~~--~~~~--~~~~~~~---~~~l~l~~~~~~~~~~~~~~~~~~~~~~~   74 (138)
T 2a4x_A            3 ARISLFAVVVEDMAKSLEFYRK-LGVEIPAEAD--SAPH--TEAVLDG---GIRLAWDTVETVRSYDPEWQAPTGGHRFA   74 (138)
T ss_dssp             CEEEEEEEEESCHHHHHHHHHT-TTCCCCGGGG--GCSE--EEEECTT---SCEEEEEEHHHHHHHCTTCCCCBSSCSEE
T ss_pred             ceeeEEEEEECCHHHHHHHHHH-cCCcEEecCC--CCce--EEEEcCC---CeEEEEecCccchhhCcccCCCCCCCeEE
Confidence            4689999999999999999998 9999875432  1222  2233211   34455543211      101123457789


Q ss_pred             EEEEec---chHHhHHHHHHHHHHhCCeeecCCccCCCCCceEEEEECCCCceEEEeechhh
Q 022818          226 VAISTD---DVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNEDF  284 (291)
Q Consensus       226 i~~~v~---di~~~~~~l~~~~~~~G~~~~~~~~~~~~~~~~~~~~~DpdG~~iel~~~~~~  284 (291)
                      ++|.|+   |+++++++|    +++|+++..+|...++ +.+.+||+|||||.|||++..++
T Consensus        75 l~f~v~~~~dv~~~~~~l----~~~G~~~~~~~~~~~~-g~~~~~~~DPdG~~iel~~~~~~  131 (138)
T 2a4x_A           75 IAFEFPDTASVDKKYAEL----VDAGYEGHLKPWNAVW-GQRYAIVKDPDGNVVDLFAPLPL  131 (138)
T ss_dssp             EEEECSSHHHHHHHHHHH----HHTTCCEEEEEEEETT-TEEEEEEECTTCCEEEEEEECTT
T ss_pred             EEEEeCCHHHHHHHHHHH----HHCCCceeeCCcccCC-CcEEEEEECCCCCEEEEEeCCcc
Confidence            999999   899999999    9999999888877766 45889999999999999998743

>1xrk_A Bleomycin resistance protein; arm exchange, ligand binding protein, thermostable mutant, antibiotic inhibitor; HET: BLM; 1.50A {Streptoalloteichus hindustanus} SCOP: d.32.1.2 PDB: 2zhp_A* 1byl_A

Probab=99.70  E-value=3e-16  Score=114.72  Aligned_cols=109  Identities=14%  Similarity=0.091  Sum_probs=83.0

Q ss_pred             ceEEEeeeCChhhhHHHHHHhcCCeeeeeeccCCccceEEEeccccCCceeEEEEeeecCcceeecCcceeEEEEEecch
Q 022818          154 LCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDV  233 (291)
Q Consensus       154 ~~~v~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~hi~~~v~di  233 (291)
                      ..|+.|.|+|++++.+||+++|||++....    .++  ..+..+    +..+.+......    ...+..|++|.|+|+
T Consensus         6 ~~~~~l~v~D~~~a~~FY~~~lG~~~~~~~----~~~--~~~~~~----~~~l~l~~~~~~----~~~~~~~~~~~v~dv   71 (124)
T 1xrk_A            6 SAVPVLTARDVAEAVEFWTDRLGFSRVFVE----DDF--AGVVRD----DVTLFISAVQDQ----VVPDNTQAWVWVRGL   71 (124)
T ss_dssp             EEEEEEEESCHHHHHHHHHHTTCCEEEEEC----SSE--EEEEET----TEEEEEEECSCT----TTGGGCEEEEEEECH
T ss_pred             ceeEEEEcCCHHHHHHHHHHccCceEEecC----CCE--EEEEEC----CEEEEEEcCCCC----CCCCceEEEEEECCH
Confidence            468999999999999999999999987651    122  333322    344555443221    122447999999999


Q ss_pred             HHhHHHHHHHHHHh------CC--eeecCCccCCCCCceEEEEECCCCceEEEeech
Q 022818          234 YKSAEVVNLVTQEL------GG--KITRQPGSIPGLNTKITSFVDPDGWKTVLVDNE  282 (291)
Q Consensus       234 ~~~~~~l~~~~~~~------G~--~~~~~~~~~~~~~~~~~~~~DpdG~~iel~~~~  282 (291)
                      ++++++|    +++      |+  ++..+|...++ + +.+||+|||||.|||.+..
T Consensus        72 ~~~~~~l----~~~~~~~~~G~~~~~~~~~~~~~~-g-~~~~~~DPdG~~iel~~~~  122 (124)
T 1xrk_A           72 DELYAEW----SEVVSTNFRDASGPAMTEIVEQPW-G-REFALRDPAGNCVHFVAEE  122 (124)
T ss_dssp             HHHHHHH----TTTSBSCTTTCSSCEECCCEEETT-E-EEEEEECTTCCEEEEEEC-
T ss_pred             HHHHHHH----HHhcccccCCccccccCCceecCC-C-CEEEEECCCCCEEEEEEec
Confidence            9999999    999      99  88888887776 4 8999999999999999864

>1ecs_A Bleomycin resistance protein; arm-exchange, antibiotic inhibitor; HET: PG4; 1.70A {Klebsiella pneumoniae} SCOP: d.32.1.2 PDB: 1ewj_A* 1niq_B* 1mh6_A

Probab=99.70  E-value=4.8e-16  Score=113.94  Aligned_cols=113  Identities=20%  Similarity=0.272  Sum_probs=83.7

Q ss_pred             ceEEEeeeCChhhhHHHHHHhcCCeeeeeeccCCccceEEEeccccCCceeEEEEeeecCcceeecCcceeEEEEEecch
Q 022818          154 LCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDV  233 (291)
Q Consensus       154 ~~~v~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~hi~~~v~di  233 (291)
                      ..++.|.|+|++++++||++ |||++...    +.  .+..+..+    ...+.+......   ....+..|++|.|+|+
T Consensus         4 ~~~~~l~v~D~~~a~~FY~~-LG~~~~~~----~~--~~~~~~~~----~~~l~l~~~~~~---~~~~~~~~~~~~v~dv   69 (126)
T 1ecs_A            4 QATPNLPSRDFDSTAAFYER-LGFGIVFR----DA--GWMILQRG----DLMLEFFAHPGL---DPLASWFSCCLRLDDL   69 (126)
T ss_dssp             EEEEEEEESCHHHHHHHHHT-TTCEEEEE----CS--SEEEEEET----TEEEEEEECTTC---CGGGCCCEEEEEESCH
T ss_pred             cEEEEEEeCCHHHHHHHHHH-CCCEEEec----CC--CEEEEEeC----CEEEEEEeCCCC---CCCCcceEEEEEECCH
Confidence            45789999999999999998 99998754    12  23334422    345555443221   1224668999999999


Q ss_pred             HHhHHHHHHHHHHhCCee-------ecCCccCCCCCceEEEEECCCCceEEEeechhhh
Q 022818          234 YKSAEVVNLVTQELGGKI-------TRQPGSIPGLNTKITSFVDPDGWKTVLVDNEDFL  285 (291)
Q Consensus       234 ~~~~~~l~~~~~~~G~~~-------~~~~~~~~~~~~~~~~~~DpdG~~iel~~~~~~~  285 (291)
                      ++++++|    +++|+++       ..+|...++ +.+.+||+|||||.|||++.....
T Consensus        70 ~~~~~~l----~~~G~~~~~~~~~~~~~~~~~~~-g~~~~~~~DPdG~~iel~~~~~~~  123 (126)
T 1ecs_A           70 AEFYRQC----KSVGIQETSSGYPRIHAPELQGW-GGTMAALVDPDGTLLRLIQNELLA  123 (126)
T ss_dssp             HHHHHHH----HHTTCCBCSSSSSEEEEEEECTT-SSEEEEEECTTSCEEEEEECCC--
T ss_pred             HHHHHHH----HHCCCccccccCccccCCcccCc-ccEEEEEECCCCCEEEEecchhhc
Confidence            9999999    9999994       667776665 458999999999999999986643

>3r4q_A Lactoylglutathione lyase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.51A {Agrobacterium tumefaciens}

Probab=99.69  E-value=6.6e-17  Score=123.72  Aligned_cols=122  Identities=19%  Similarity=0.247  Sum_probs=86.1

Q ss_pred             CCcceeeEEEEEEeCCHHHHHHHHHhhcCCEEEEEeecCCCceeEEEEecCCCCcceEEEeeecC-C-----CCcccCCC
Q 022818           18 KKDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNY-G-----VTSYDIGT   91 (291)
Q Consensus        18 ~~~~~~i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~-----~~~~~~g~   91 (291)
                      ++++.+|+||.|.|+|++++++||+++|||++......     ...++..++  ..+.+...... .     ..+...+.
T Consensus         3 m~~i~~l~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~-----~~~~~~~g~--~~~~l~~~~~~~~~~~~~~~~~~~~~   75 (160)
T 3r4q_A            3 MKPPSAIMETALYADDLDAAEAFYRDVFGLEMVLKLPG-----QLVFFKCGR--QMLLLFDPQESSRADANNPIPRHGAV   75 (160)
T ss_dssp             -CCCSCEEEEEEECSCHHHHHHHHHHHSCCEEEEEETT-----TEEEEEETT--EEEEEECHHHHTCCCTTCCSCCCEEE
T ss_pred             ccccccccEEEEEeCCHHHHHHHHHHhcCCEEEEecCC-----cEEEEeCCC--EEEEEEecCCccCccccCCCCcCCCc
Confidence            35689999999999999999999999999999876431     234454443  22222111111 0     11111234


Q ss_pred             CceEEEEEe---CCHHHHHHHHHHcCCeeecCCeecCCCceEEEEEECCCCCEEEEEeCC
Q 022818           92 GFGHFAIAT---EDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRG  148 (291)
Q Consensus        92 ~~~~i~~~v---~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~Dp~G~~iel~~~~  148 (291)
                      +..|++|.|   +|+++++++|+++|+++..++.. .+|.. .++|+||+||+|||++..
T Consensus        76 g~~hi~f~V~~~~dld~~~~~l~~~G~~~~~~~~~-~~g~~-~~~~~DPdG~~iel~~~~  133 (160)
T 3r4q_A           76 GQGHFCFYADDKAEVDEWKTRFEALEIPVEHYHRW-PNGSY-SVYIRDPAGNSVEVGEGK  133 (160)
T ss_dssp             EECEEEEEESSHHHHHHHHHHHHTTTCCCCEEEEC-TTSCE-EEEEECTTCCEEEEEEGG
T ss_pred             ceeEEEEEeCCHHHHHHHHHHHHHCCCEEeccccc-cCCcE-EEEEECCCCCEEEEEeCC
Confidence            678999999   89999999999999998754332 33444 589999999999999975

>3ct8_A Protein BH2160, putative glyoxalase; NP_243026.1, glyoxalase/bleomycin resis protein/dioxygenase superfamily, structural genomics; HET: UNL; 2.10A {Bacillus halodurans c-125}

Probab=99.69  E-value=7.8e-16  Score=115.86  Aligned_cols=119  Identities=19%  Similarity=0.197  Sum_probs=86.5

Q ss_pred             CCCCCceEEEeeeCChhhhHHHH---HHhcCCeeeeeeccCCccceEEEeccccCCceeEEEEeeecCc---ceee-cCc
Q 022818          149 PTPEPLCQVMLRVGDLGRSIKFY---EKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGV---TEYT-KGN  221 (291)
Q Consensus       149 ~~~~~~~~v~l~v~d~~~~~~fy---~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~---~~~~-~~~  221 (291)
                      ....++.|+.|.|+|++++++||   +++|||++......  +  . .++. +    ...+.+......   .+.. ..+
T Consensus        16 ~~~~~i~hv~l~v~Dl~~a~~FY~~~~~~LG~~~~~~~~~--~--~-~~~~-g----~~~l~l~~~~~~~~~~~~~~~~~   85 (146)
T 3ct8_A           16 YFQGMLHHVEINVDHLEESIAFWDWLLGELGYEDYQSWSR--G--K-SYKH-G----KTYLVFVQTEDRFQTPTFHRKRT   85 (146)
T ss_dssp             TTTTSCCEEEEEESCHHHHHHHHHHHHHHTTCEEEEEETT--E--E-EEEE-T----TEEEEEEECCGGGSCSCCCTTSS
T ss_pred             ccccceeEEEEEeCCHHHHHHHHHhhhhhCCCEEEEecCC--C--c-eEec-C----CeEEEEEEcCCCcccccccccCC
Confidence            44578999999999999999999   99999998765431  1  1 2333 2    245666544321   1111 235


Q ss_pred             ceeEEEEEec---chHHhHHHHHHHHHHhCCeeec-CCccCCC-CCceEEEEECCCCceEEEeec
Q 022818          222 AYAQVAISTD---DVYKSAEVVNLVTQELGGKITR-QPGSIPG-LNTKITSFVDPDGWKTVLVDN  281 (291)
Q Consensus       222 ~~~hi~~~v~---di~~~~~~l~~~~~~~G~~~~~-~~~~~~~-~~~~~~~~~DpdG~~iel~~~  281 (291)
                      +..|++|.|+   |+++++++|    +++|+++.. +|...++ .+.+.+||+|||||+|||++.
T Consensus        86 g~~hi~f~v~~~~dv~~~~~~l----~~~G~~~~~~~p~~~~~g~~~~~~~~~DPdG~~iel~~p  146 (146)
T 3ct8_A           86 GLNHLAFHAASREKVDELTQKL----KERGDPILYEDRHPFAGGPNHYAVFCEDPNRIKVEIVAP  146 (146)
T ss_dssp             SCCEEEEECSCHHHHHHHHHHH----HHHTCCBCCTTTTTCTTCTTCCEEEEECTTCCEEEEECC
T ss_pred             CceEEEEECCCHHHHHHHHHHH----HHcCCccccCCCccccCCCceEEEEEECCCCCEEEEEeC
Confidence            6789999999   888999999    999999887 3554443 235789999999999999863

>3r4q_A Lactoylglutathione lyase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.51A {Agrobacterium tumefaciens}

Probab=99.68  E-value=2e-16  Score=121.04  Aligned_cols=119  Identities=13%  Similarity=0.177  Sum_probs=85.4

Q ss_pred             CCCceEEEeeeCChhhhHHHHHHhcCCeeeeeeccCCccceEEEeccccCCceeEEEEeeecCc--------ceeecCcc
Q 022818          151 PEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGV--------TEYTKGNA  222 (291)
Q Consensus       151 ~~~~~~v~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~--------~~~~~~~~  222 (291)
                      ..++.|+.|.|+|++++++||+++|||++......     ...++..+    ...+.+......        .+...+.+
T Consensus         6 i~~l~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~-----~~~~~~~g----~~~~~l~~~~~~~~~~~~~~~~~~~~~g   76 (160)
T 3r4q_A            6 PSAIMETALYADDLDAAEAFYRDVFGLEMVLKLPG-----QLVFFKCG----RQMLLLFDPQESSRADANNPIPRHGAVG   76 (160)
T ss_dssp             CSCEEEEEEECSCHHHHHHHHHHHSCCEEEEEETT-----TEEEEEET----TEEEEEECHHHHTCCCTTCCSCCCEEEE
T ss_pred             cccccEEEEEeCCHHHHHHHHHHhcCCEEEEecCC-----cEEEEeCC----CEEEEEEecCCccCccccCCCCcCCCcc
Confidence            46799999999999999999999999998765431     12233322    233334321111        01123346


Q ss_pred             eeEEEEEe---cchHHhHHHHHHHHHHhCCeeecCCccCCCCCceEEEEECCCCceEEEeechhh
Q 022818          223 YAQVAIST---DDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNEDF  284 (291)
Q Consensus       223 ~~hi~~~v---~di~~~~~~l~~~~~~~G~~~~~~~~~~~~~~~~~~~~~DpdG~~iel~~~~~~  284 (291)
                      ..|++|.|   +|+++++++|    +++|+++..++.. +. +++.+||+|||||+|||+++...
T Consensus        77 ~~hi~f~V~~~~dld~~~~~l----~~~G~~~~~~~~~-~~-g~~~~~~~DPdG~~iel~~~~~~  135 (160)
T 3r4q_A           77 QGHFCFYADDKAEVDEWKTRF----EALEIPVEHYHRW-PN-GSYSVYIRDPAGNSVEVGEGKLW  135 (160)
T ss_dssp             ECEEEEEESSHHHHHHHHHHH----HTTTCCCCEEEEC-TT-SCEEEEEECTTCCEEEEEEGGGG
T ss_pred             eeEEEEEeCCHHHHHHHHHHH----HHCCCEEeccccc-cC-CcEEEEEECCCCCEEEEEeCCCC
Confidence            79999999   8899999999    9999998755433 22 36899999999999999998653

>3ct8_A Protein BH2160, putative glyoxalase; NP_243026.1, glyoxalase/bleomycin resis protein/dioxygenase superfamily, structural genomics; HET: UNL; 2.10A {Bacillus halodurans c-125}

Probab=99.68  E-value=7e-16  Score=116.12  Aligned_cols=120  Identities=18%  Similarity=0.343  Sum_probs=86.4

Q ss_pred             CCCcceeeEEEEEEeCCHHHHHHHH---HhhcCCEEEEEeecCCCceeEEEEecCCCCcceEEEeeecCC---CCccc-C
Q 022818           17 PKKDKRRFLHAVYRVGDLDRTIKFY---TECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYG---VTSYD-I   89 (291)
Q Consensus        17 ~~~~~~~i~hv~l~v~d~~~~~~FY---~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~---~~~~~-~   89 (291)
                      +..+++++.|+.|.|+|++++++||   +++|||++....+  .+   ..++. ++    ..+.+.....   ..+.. .
T Consensus        14 ~~~~~~~i~hv~l~v~Dl~~a~~FY~~~~~~LG~~~~~~~~--~~---~~~~~-g~----~~l~l~~~~~~~~~~~~~~~   83 (146)
T 3ct8_A           14 NLYFQGMLHHVEINVDHLEESIAFWDWLLGELGYEDYQSWS--RG---KSYKH-GK----TYLVFVQTEDRFQTPTFHRK   83 (146)
T ss_dssp             CTTTTTSCCEEEEEESCHHHHHHHHHHHHHHTTCEEEEEET--TE---EEEEE-TT----EEEEEEECCGGGSCSCCCTT
T ss_pred             ccccccceeEEEEEeCCHHHHHHHHHhhhhhCCCEEEEecC--CC---ceEec-CC----eEEEEEEcCCCccccccccc
Confidence            3467899999999999999999999   9999999976543  11   23443 32    2344443321   11111 2


Q ss_pred             CCCceEEEEEeC---CHHHHHHHHHHcCCeeec-CCeecCCC-ceEEEEEECCCCCEEEEEe
Q 022818           90 GTGFGHFAIATE---DVYKLVENIRAKGGNVTR-EPGPLKGG-TTHIAFVKDPDGYIFELIQ  146 (291)
Q Consensus        90 g~~~~~i~~~v~---d~~~~~~~l~~~G~~~~~-~~~~~~~g-~~~~~~~~Dp~G~~iel~~  146 (291)
                      ..+..|++|.|+   |+++++++|+++|+++.. .|....+| ..+.++|+||+||.|||++
T Consensus        84 ~~g~~hi~f~v~~~~dv~~~~~~l~~~G~~~~~~~p~~~~~g~~~~~~~~~DPdG~~iel~~  145 (146)
T 3ct8_A           84 RTGLNHLAFHAASREKVDELTQKLKERGDPILYEDRHPFAGGPNHYAVFCEDPNRIKVEIVA  145 (146)
T ss_dssp             SSSCCEEEEECSCHHHHHHHHHHHHHHTCCBCCTTTTTCTTCTTCCEEEEECTTCCEEEEEC
T ss_pred             CCCceEEEEECCCHHHHHHHHHHHHHcCCccccCCCccccCCCceEEEEEECCCCCEEEEEe
Confidence            346789999999   999999999999999877 35444432 2234899999999999986

>2r6u_A Uncharacterized protein; structural genomics, PSI-2, RHA04853, MCSG, protein structur initiative, midwest center for structural genomics; 1.50A {Rhodococcus SP}

Probab=99.68  E-value=1.7e-16  Score=119.73  Aligned_cols=114  Identities=17%  Similarity=0.287  Sum_probs=82.6

Q ss_pred             CCceEEEeeeCChhhhHHHHHHhcCCeeeeeeccCCccceEEEeccccCCc--------eeEEEEeeecCcceeecCcce
Q 022818          152 EPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQ--------TTVLELTYNYGVTEYTKGNAY  223 (291)
Q Consensus       152 ~~~~~v~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~l~l~~~~~~~~~~~~~~~  223 (291)
                      .++.|+.|.|+|++++++||+++|||++...   ++..+.++.++  ....        .....+...      ..+++ 
T Consensus        24 ~~i~hv~l~v~Dl~~a~~FY~~vLG~~~~~~---~~~~~~~~~~~--~~~~~l~~~~~~~~~~~l~~~------~~~~g-   91 (148)
T 2r6u_A           24 GRIVHFEIPFDDGDRARAFYRDAFGWAIAEI---PDMDYSMVTTG--PVGESGMPDEPGYINGGMMQR------GEVTT-   91 (148)
T ss_dssp             CCEEEEEEEESSHHHHHHHHHHHHCCEEEEE---TTTTEEEEECS--CBCTTSSBCSSSCBCEEEEES------SSSCS-
T ss_pred             CceEEEEEEeCCHHHHHHHHHHccCcEEEEC---CCCCEEEEEeC--CcceeecccCCcccccceeec------CCCCe-
Confidence            4799999999999999999999999998763   22223333322  2100        011111110      01134 


Q ss_pred             eEEEEEecchHHhHHHHHHHHHHhCCeeecCCccCCCCCceEEEEECCCCceEEEeech
Q 022818          224 AQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNE  282 (291)
Q Consensus       224 ~hi~~~v~di~~~~~~l~~~~~~~G~~~~~~~~~~~~~~~~~~~~~DpdG~~iel~~~~  282 (291)
                      .|++|.|+|+++++++|    +++|+++..+|...+++ ++.+||+|||||.|||++..
T Consensus        92 ~~l~f~v~dld~~~~~l----~~~G~~~~~~~~~~~~~-g~~~~~~DPdG~~iel~~~~  145 (148)
T 2r6u_A           92 PVVTVDVESIESALERI----ESLGGKTVTGRTPVGNM-GFAAYFTDSEGNVVGLWETA  145 (148)
T ss_dssp             CEEEEECSCHHHHHHHH----HHTTCEEEEEEEEETTT-EEEEEEECTTSCEEEEEEEC
T ss_pred             EEEEEEcCCHHHHHHHH----HHcCCeEecCCeecCCC-EEEEEEECCCCCEEEEEecC
Confidence            49999999999999999    99999998888776632 38999999999999999864

>2rbb_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-2, PROT structure initiative; 1.82A {Burkholderia phytofirmans}

Probab=99.68  E-value=3.9e-16  Score=116.69  Aligned_cols=117  Identities=15%  Similarity=0.185  Sum_probs=82.8

Q ss_pred             CceEEEeeeCChhhhHHHHHHhcCCeeeeeeccCCccceEEEeccccCCceeEEEEeee-----cC--cceeecCcceeE
Q 022818          153 PLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYN-----YG--VTEYTKGNAYAQ  225 (291)
Q Consensus       153 ~~~~v~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~-----~~--~~~~~~~~~~~h  225 (291)
                      ++.|+.|.|+|++++.+||+++|||++......+  .+  ..+..+    ...+.+...     ..  ......+++ .|
T Consensus         8 ~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~--~~--~~~~~~----~~~l~l~~~~~~~~~~~~~~~~~~~~~-~~   78 (141)
T 2rbb_A            8 DLSYVNIFTRDIVAMSAFYQQVFGFQEIESIRSP--IF--RGLDTG----KSCIGFNAHEAYELMQLAQFSETSGIK-FL   78 (141)
T ss_dssp             EEEEEEEECSCHHHHHHHHHHHHCCEECGGGCBT--TE--EEEECS----SSEEEEECTHHHHHTTCGGGCCCBSCC-EE
T ss_pred             cccEEEEEECCHHHHHHHHHHhcCCeeecccCCC--ce--EEeecC----CEEEEEcCccccccccccccCCCCCCe-EE
Confidence            7899999999999999999999999976443211  22  223321    223333211     00  011112334 59


Q ss_pred             EEEEec---chHHhHHHHHHHHHHhCCeeecCCccCCCCCceEEEEECCCCceEEEeechh
Q 022818          226 VAISTD---DVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNED  283 (291)
Q Consensus       226 i~~~v~---di~~~~~~l~~~~~~~G~~~~~~~~~~~~~~~~~~~~~DpdG~~iel~~~~~  283 (291)
                      ++|.|+   |+++++++|    +++|+++..+|...++ +.+.+||+|||||.|||++...
T Consensus        79 ~~f~v~~~~dv~~~~~~l----~~~G~~~~~~~~~~~~-g~~~~~~~DPdG~~iel~~~~~  134 (141)
T 2rbb_A           79 LNFDVDTKEAVDKLVPVA----IAAGATLIKAPYETYY-HWYQAVLLDPERNVFRINNVLE  134 (141)
T ss_dssp             EEEECSCHHHHHHHHHHH----HHTTCEEEEEEEECTT-SEEEEEEECTTSCEEEEEEEC-
T ss_pred             EEEEcCCHHHHHHHHHHH----HHcCCeEecCccccCC-ccEEEEEECCCCCEEEEEEccc
Confidence            999999   588888888    9999999888877765 4689999999999999998643

>1xqa_A Glyoxalase/bleomycin resistance protein; dioxygenase, structural GEN midwest center for structural genomics, MCSG; HET: P6G; 1.80A {Bacillus cereus atcc 14579} SCOP: d.32.1.2

Probab=99.68  E-value=3.5e-16  Score=112.29  Aligned_cols=108  Identities=19%  Similarity=0.194  Sum_probs=79.7

Q ss_pred             CCceEEEeeeCChhhhHHHHHHhcCCeeeeeeccCCccceEEEeccccCCceeEEEEeeecCcceeecCcceeEEEEEe-
Q 022818          152 EPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAIST-  230 (291)
Q Consensus       152 ~~~~~v~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~hi~~~v-  230 (291)
                      +++.|+.|.|+|++++.+||+++|||++....+   .  ...++..+.   +..+.+......    ..++..|++|.| 
T Consensus         2 ~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~---~--~~~~~~~~~---~~~l~l~~~~~~----~~~~~~~~~~~v~   69 (113)
T 1xqa_A            2 MGIKHLNLTVADVVAAREFLEKYFGLTCSGTRG---N--AFAVMRDND---GFILTLMKGKEV----QYPKTFHVGFPQE   69 (113)
T ss_dssp             CCCCEEEEEESCHHHHHHHHHHHHCCEEEEEET---T--TEEEEECTT---CCEEEEEECSSC----CCCTTCCEEEECS
T ss_pred             CeeEEEEEEeCCHHHHHHHHHHhCCCEEeccCC---C--cEEEEEcCC---CcEEEEEeCCCC----CCCceeEEEEEcC
Confidence            478999999999999999999999999875421   1  233444322   345555443221    124678999999 


Q ss_pred             --cchHHhHHHHHHHHHHhCCeeecCCccCCCCCceEEEEECCCCceEEEe
Q 022818          231 --DDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLV  279 (291)
Q Consensus       231 --~di~~~~~~l~~~~~~~G~~~~~~~~~~~~~~~~~~~~~DpdG~~iel~  279 (291)
                        +|+++++++|    +++|+++. .|... .  ++.+|++|||||.|||+
T Consensus        70 ~~~d~~~~~~~l----~~~G~~~~-~p~~~-~--~~~~~~~DPdG~~iel~  112 (113)
T 1xqa_A           70 SEEQVDKINQRL----KEDGFLVE-PPKHA-H--AYTFYVEAPGGFTIEVM  112 (113)
T ss_dssp             SHHHHHHHHHHH----HHTTCCCC-CCEEC----CEEEEEEETTTEEEEEE
T ss_pred             CHHHHHHHHHHH----HHCCCEEe-cCcCC-C--cEEEEEECCCCcEEEEe
Confidence              7888888888    99999975 45433 2  48999999999999996

>3zi1_A Glyoxalase domain-containing protein 4; isomerase; 1.90A {Homo sapiens}

Probab=99.68  E-value=2.9e-16  Score=134.18  Aligned_cols=118  Identities=28%  Similarity=0.513  Sum_probs=94.2

Q ss_pred             CCCceEEEeeeCChhhhHHHHHHhcCCeeeeeeccC-----------CccceEEEeccccCCceeEEEEeeecCcceeec
Q 022818          151 PEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKP-----------EYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTK  219 (291)
Q Consensus       151 ~~~~~~v~l~v~d~~~~~~fy~~~lG~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~  219 (291)
                      .+++.|++|.|+|++++++||+++|||++.......           ++++...++..+.......+++..+.+...+..
T Consensus        25 ~~~i~Hv~l~V~Dle~s~~FY~~vLGl~~~~~~~~~~~~~a~~~g~~~~~~~~~~l~~~~~~~~~~leL~~~~~~~~~~~  104 (330)
T 3zi1_A           25 ARRALHFVFKVGNRFQTARFYRDVLGMKVLRHEEFEEGCKAACNGPYDGKWSKTMVGFGPEDDHFVAELTYNYGVGDYKL  104 (330)
T ss_dssp             CCEEEEEEEECSCHHHHHHHHHHTSCCEEEEEEEEC---------CCCSCEEEEEEESSCTTTCCEEEEEEETTCCCCCB
T ss_pred             cceeeEEEEEeCCHHHHHHHHHHhcCCeEEEEeecchhhhhhccCCcCCceEEEEEecCCCCCccEEEEeccCCCCcccc
Confidence            358999999999999999999999999987765544           445667777765554567788877665544456


Q ss_pred             CcceeEEEEEecchHHhHHHHHHHHHHhCCeeecCCccCCCCCceEEEEECCCCceEEEeech
Q 022818          220 GNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNE  282 (291)
Q Consensus       220 ~~~~~hi~~~v~di~~~~~~l~~~~~~~G~~~~~~~~~~~~~~~~~~~~~DpdG~~iel~~~~  282 (291)
                      ++++.|++|.|+|+   .+++    +++|+++...|.       +++||+|||||.|||++..
T Consensus       105 ~~g~~hiaf~V~d~---~~~l----~~~G~~~~~~~~-------~~~~~~DPdG~~iel~~~~  153 (330)
T 3zi1_A          105 GNDFMGITLASSQA---VSNA----RKLEWPLTEVAE-------GVFETEAPGGYKFYLQNRS  153 (330)
T ss_dssp             CSSEEEEEEECHHH---HHHH----HHHTCCCEEEET-------TEEEEECTTSCEEEEESSC
T ss_pred             CCCeeEEEEECchH---HHHH----HHcCCceeccCC-------ceEEEECCCCCEEEEEecC
Confidence            67999999999986   5677    889999876552       4789999999999999875

>3rri_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-biology, midwest center for structu genomics; 1.50A {Alicyclobacillus acidocaldarius subsp}

Probab=99.68  E-value=7e-16  Score=114.34  Aligned_cols=120  Identities=14%  Similarity=0.081  Sum_probs=83.1

Q ss_pred             CCCCceEEEeeeCChhhhHHHHHHhcCCeeeeeeccCCccceEEEeccccCCceeEEEEeeecCcceeecCcceeEEEEE
Q 022818          150 TPEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAIS  229 (291)
Q Consensus       150 ~~~~~~~v~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~hi~~~  229 (291)
                      .+.++.|+.|.|+|++++++||+++|||++....+      .++.+....  ..  +.+....... .+...+..|++|.
T Consensus         6 ~~~~i~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~~------~~~~~~~~g--~~--~~l~~~~~~~-~~~~~~~~h~~~~   74 (135)
T 3rri_A            6 NPNDVFHLAIPARDLDEAYDFYVTKLGCKLARRYP------DRITLDFFG--DQ--LVCHLSDRWD-REVSMYPRHFGIT   74 (135)
T ss_dssp             CTTSEEEEEEEESCHHHHHHHHTTTTCCEEEEEET------TEEEEEETT--EE--EEEEECSCSC-SSCCSSSCEEEEE
T ss_pred             CCCccceEEEEcCCHHHHHHHHHHhcCCEeeccCC------CcEEEEEeC--CE--EEEEEcCccc-ccCCCCCCeEEEE
Confidence            45689999999999999999999999999865432      123333211  12  3332221110 1123456799999


Q ss_pred             ec---chHHhHHHHHHHHHHhCCeeecCCccCC---CCCceEEEEECCCCceEEEeechhh
Q 022818          230 TD---DVYKSAEVVNLVTQELGGKITRQPGSIP---GLNTKITSFVDPDGWKTVLVDNEDF  284 (291)
Q Consensus       230 v~---di~~~~~~l~~~~~~~G~~~~~~~~~~~---~~~~~~~~~~DpdG~~iel~~~~~~  284 (291)
                      +.   |+++++++|    +++|+++..+|...+   .++.+.+||+|||||+|||++..+.
T Consensus        75 ~~~~~d~~~~~~~l----~~~G~~~~~~p~~~~~~~~~~~~~~~~~DPdGn~iel~~~~~~  131 (135)
T 3rri_A           75 FRDKKHFDNLYKLA----KQRGIPFYHDLSRRFEGLIEEHETFFLIDPSNNLLEFKYYFDD  131 (135)
T ss_dssp             CSSHHHHHHHHHHH----HHTTCCEEEEEEEESTTSTTCEEEEEEECTTCCEEEEEEESSG
T ss_pred             EcChHhHHHHHHHH----HHcCCceecCcccccCCCCCceEEEEEECCCCCEEEEEEECCh
Confidence            85   588888888    999999887776531   2234789999999999999987543

>1nki_A Probable fosfomycin resistance protein; potassium binding loop, manganese binding, transferase; 0.95A {Pseudomonas aeruginosa} SCOP: d.32.1.2 PDB: 1lqo_A 1lqk_A 1lqp_A 1nnr_A

Probab=99.68  E-value=8.2e-16  Score=114.04  Aligned_cols=111  Identities=26%  Similarity=0.273  Sum_probs=83.4

Q ss_pred             CceEEEeeeCChhhhHHHHHHhcCCeeeeeeccCCccceEEEeccccCCceeEEEEeeecCcceeecCcceeEEEEEec-
Q 022818          153 PLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTD-  231 (291)
Q Consensus       153 ~~~~v~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~hi~~~v~-  231 (291)
                      ++.|+.|.|+|++++.+||+++|||++....+  +.    .++..+    +..+.+......  .....+..|++|.|+ 
T Consensus         4 ~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~--~~----~~~~~~----~~~l~l~~~~~~--~~~~~~~~h~~~~v~~   71 (135)
T 1nki_A            4 GLNHLTLAVADLPASIAFYRDLLGFRLEARWD--QG----AYLELG----SLWLCLSREPQY--GGPAADYTHYAFGIAA   71 (135)
T ss_dssp             EEEEEEEEESCHHHHHHHHHHTTCCEEEEEET--TE----EEEEET----TEEEEEEECTTC--CCCCSSSCEEEEEECH
T ss_pred             eEeEEEEEeCCHHHHHHHHHHhcCCEEEEcCC--Cc----eEEecC----CEEEEEEeCCCC--CCCCCCcceEEEEccH
Confidence            58899999999999999999999999876532  11    223322    234555443211  123346789999997 


Q ss_pred             -chHHhHHHHHHHHHHhCCeeecCCccCCCCCceEEEEECCCCceEEEeechh
Q 022818          232 -DVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNED  283 (291)
Q Consensus       232 -di~~~~~~l~~~~~~~G~~~~~~~~~~~~~~~~~~~~~DpdG~~iel~~~~~  283 (291)
                       |+++++++|    +++|+++..++..    +++.+||+|||||.|||++...
T Consensus        72 ~d~~~~~~~l----~~~G~~~~~~~~~----~~~~~~~~DPdG~~iel~~~~~  116 (135)
T 1nki_A           72 ADFARFAAQL----RAHGVREWKQNRS----EGDSFYFLDPDGHRLEAHVGDL  116 (135)
T ss_dssp             HHHHHHHHHH----HHTTCCEEECCCS----SSCEEEEECTTCCEEEEESCCH
T ss_pred             HHHHHHHHHH----HHCCCceecCCCC----CeEEEEEECCCCCEEEEEECCc
Confidence             899999999    9999998876643    3588999999999999998765

>2rbb_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-2, PROT structure initiative; 1.82A {Burkholderia phytofirmans}

Probab=99.68  E-value=9.1e-16  Score=114.70  Aligned_cols=118  Identities=17%  Similarity=0.118  Sum_probs=83.5

Q ss_pred             eeeEEEEEEeCCHHHHHHHHHhhcCCEEEEEeecCCCceeEEEEecCCCCcceEEEeeec-----CC-CCc-ccCCCCce
Q 022818           22 RRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYN-----YG-VTS-YDIGTGFG   94 (291)
Q Consensus        22 ~~i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-----~~-~~~-~~~g~~~~   94 (291)
                      +++.|+.|.|+|++++.+||+++|||++..+...  ..  ...+..++  ..  +.+...     .. ... ...+.+ .
T Consensus         7 ~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~--~~--~~~~~~~~--~~--l~l~~~~~~~~~~~~~~~~~~~~~-~   77 (141)
T 2rbb_A            7 ADLSYVNIFTRDIVAMSAFYQQVFGFQEIESIRS--PI--FRGLDTGK--SC--IGFNAHEAYELMQLAQFSETSGIK-F   77 (141)
T ss_dssp             CEEEEEEEECSCHHHHHHHHHHHHCCEECGGGCB--TT--EEEEECSS--SE--EEEECTHHHHHTTCGGGCCCBSCC-E
T ss_pred             CcccEEEEEECCHHHHHHHHHHhcCCeeecccCC--Cc--eEEeecCC--EE--EEEcCccccccccccccCCCCCCe-E
Confidence            3999999999999999999999999998643221  11  23344332  22  222111     00 011 112334 4


Q ss_pred             EEEEEeC---CHHHHHHHHHHcCCeeecCCeecCCCceEEEEEECCCCCEEEEEeCCC
Q 022818           95 HFAIATE---DVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRGP  149 (291)
Q Consensus        95 ~i~~~v~---d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~Dp~G~~iel~~~~~  149 (291)
                      |++|.|+   |+++++++|+++|+++..+|...++|.. .++|+||+||+|||++...
T Consensus        78 ~~~f~v~~~~dv~~~~~~l~~~G~~~~~~~~~~~~g~~-~~~~~DPdG~~iel~~~~~  134 (141)
T 2rbb_A           78 LLNFDVDTKEAVDKLVPVAIAAGATLIKAPYETYYHWY-QAVLLDPERNVFRINNVLE  134 (141)
T ss_dssp             EEEEECSCHHHHHHHHHHHHHTTCEEEEEEEECTTSEE-EEEEECTTSCEEEEEEEC-
T ss_pred             EEEEEcCCHHHHHHHHHHHHHcCCeEecCccccCCccE-EEEEECCCCCEEEEEEccc
Confidence            9999999   5999999999999998888877777654 4899999999999998653

>1xqa_A Glyoxalase/bleomycin resistance protein; dioxygenase, structural GEN midwest center for structural genomics, MCSG; HET: P6G; 1.80A {Bacillus cereus atcc 14579} SCOP: d.32.1.2

Probab=99.68  E-value=9.1e-16  Score=110.06  Aligned_cols=108  Identities=20%  Similarity=0.277  Sum_probs=79.9

Q ss_pred             eeeEEEEEEeCCHHHHHHHHHhhcCCEEEEEeecCCCceeEEEEecCCCCcceEEEeeecCCCCcccCCCCceEEEEEe-
Q 022818           22 RRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIAT-  100 (291)
Q Consensus        22 ~~i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~~~~i~~~v-  100 (291)
                      ++|+|+.|.|+|++++.+||+++|||++.....   .  ...++..++ .  ..+.+......    ...+..|++|.| 
T Consensus         2 ~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~---~--~~~~~~~~~-~--~~l~l~~~~~~----~~~~~~~~~~~v~   69 (113)
T 1xqa_A            2 MGIKHLNLTVADVVAAREFLEKYFGLTCSGTRG---N--AFAVMRDND-G--FILTLMKGKEV----QYPKTFHVGFPQE   69 (113)
T ss_dssp             CCCCEEEEEESCHHHHHHHHHHHHCCEEEEEET---T--TEEEEECTT-C--CEEEEEECSSC----CCCTTCCEEEECS
T ss_pred             CeeEEEEEEeCCHHHHHHHHHHhCCCEEeccCC---C--cEEEEEcCC-C--cEEEEEeCCCC----CCCceeEEEEEcC
Confidence            578999999999999999999999999876431   1  234555432 2  23444433221    124688999999 


Q ss_pred             --CCHHHHHHHHHHcCCeeecCCeecCCCceEEEEEECCCCCEEEEE
Q 022818          101 --EDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELI  145 (291)
Q Consensus       101 --~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~Dp~G~~iel~  145 (291)
                        +|+++++++|+++|+++.. |....   .+.++++||+||.||++
T Consensus        70 ~~~d~~~~~~~l~~~G~~~~~-p~~~~---~~~~~~~DPdG~~iel~  112 (113)
T 1xqa_A           70 SEEQVDKINQRLKEDGFLVEP-PKHAH---AYTFYVEAPGGFTIEVM  112 (113)
T ss_dssp             SHHHHHHHHHHHHHTTCCCCC-CEEC----CEEEEEEETTTEEEEEE
T ss_pred             CHHHHHHHHHHHHHCCCEEec-CcCCC---cEEEEEECCCCcEEEEe
Confidence              8899999999999999754 54432   34589999999999986

>1qto_A Bleomycin-binding protein; arm-exchange, antibiotic inhibitor; 1.50A {Streptomyces verticillus} SCOP: d.32.1.2 PDB: 1jie_A* 1jif_A

Probab=99.67  E-value=4.4e-16  Score=113.47  Aligned_cols=107  Identities=14%  Similarity=0.091  Sum_probs=81.2

Q ss_pred             eEEEeeeCChhhhHHHHHHhcCCeeeeeeccCCccceEEEeccccCCceeEEEEeeecCcceeecCcceeEEEEEecchH
Q 022818          155 CQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDVY  234 (291)
Q Consensus       155 ~~v~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~hi~~~v~di~  234 (291)
                      .++.|.|+|++++.+||+++|||++...   . ..  +..+..+    +..+.+......   +. ++..|++|.|+|++
T Consensus         7 ~~~~l~v~D~~~a~~FY~~~LG~~~~~~---~-~~--~~~~~~~----~~~l~l~~~~~~---~~-~~~~~~~~~v~dvd   72 (122)
T 1qto_A            7 AVPVLTAVDVPANVSFWVDTLGFEKDFG---D-RD--FAGVRRG----DIRLHISRTEHQ---IV-ADNTSAWIEVTDPD   72 (122)
T ss_dssp             CCCEEEESSHHHHHHHHHHTTCCEEEEE---C-SS--EEEEEET----TEEEEEEECSCH---HH-HTTCEEEEEESCHH
T ss_pred             eeEEEEcCCHHHHHHHHHhccCcEEeeC---C-CC--EEEEEEC----CEEEEEEcCCCC---CC-CCceEEEEEECCHH
Confidence            4688999999999999999999998754   1 12  3333322    345555432221   11 23479999999999


Q ss_pred             HhHHHHHHHHHHh------CC--eeecCCccCCCCCceEEEEECCCCceEEEeec
Q 022818          235 KSAEVVNLVTQEL------GG--KITRQPGSIPGLNTKITSFVDPDGWKTVLVDN  281 (291)
Q Consensus       235 ~~~~~l~~~~~~~------G~--~~~~~~~~~~~~~~~~~~~~DpdG~~iel~~~  281 (291)
                      ++++++    +++      |+  ++..+|...++ | +.++|+|||||.|||.+.
T Consensus        73 ~~~~~l----~~~~~~~~~G~~~~~~~~~~~~~~-g-~~~~~~DPdG~~iel~~~  121 (122)
T 1qto_A           73 ALHEEW----ARAVSTDYADTSGPAMTPVGESPA-G-REFAVRDPAGNCVHFTAG  121 (122)
T ss_dssp             HHHHHH----TTTSCSCTTCTTSCEECCCEEETT-E-EEEEEECTTSCEEEEEEC
T ss_pred             HHHHHH----HhhccccccCccccccCCCcCCCC-C-cEEEEECCCCCEEEEecC
Confidence            999999    999      99  88888877776 4 889999999999999985

>1npb_A Fosfomycin-resistance protein; manganese binding, potassium binding loop, transferase; 2.50A {Serratia marcescens} SCOP: d.32.1.2

Probab=99.67  E-value=9.5e-16  Score=114.59  Aligned_cols=114  Identities=25%  Similarity=0.311  Sum_probs=84.4

Q ss_pred             CCceEEEeeeCChhhhHHHHHHhcCCeeeeeeccCCccceEEEeccccCCceeEEEEeeecCcce-eecCcceeEEEEEe
Q 022818          152 EPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTE-YTKGNAYAQVAIST  230 (291)
Q Consensus       152 ~~~~~v~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~-~~~~~~~~hi~~~v  230 (291)
                      .++.|+.|.|+|++++.+||+++|||++....+  .  .  .++..+    +..+.+.......+ .....+..|++|.|
T Consensus         3 ~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~--~--~--~~~~~~----~~~l~l~~~~~~~~~~~~~~~~~hi~~~v   72 (141)
T 1npb_A            3 QSLNHLTLAVSDLQKSVTFWHELLGLTLHARWN--T--G--AYLTCG----DLWVCLSYDEARQYVPPQESDYTHYAFTV   72 (141)
T ss_dssp             CEEEEEEEEESCHHHHHHHHHTTSCCEEEEEET--T--E--EEEEET----TEEEEEEECTTCCCCCGGGSCSCEEEEEC
T ss_pred             ceEEEEEEEeCCHHHHHHHHHhccCCEEEeecC--C--c--EEEEEC----CEEEEEEECCCCCCCCCCCCCceEEEEEe
Confidence            468999999999999999999999999876542  1  1  223322    23455544322111 12345778999999


Q ss_pred             c--chHHhHHHHHHHHHHhCCeeecCCccCCCCCceEEEEECCCCceEEEeechh
Q 022818          231 D--DVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNED  283 (291)
Q Consensus       231 ~--di~~~~~~l~~~~~~~G~~~~~~~~~~~~~~~~~~~~~DpdG~~iel~~~~~  283 (291)
                      +  |+++++++|    +++|+++..+|..    +++.+||+|||||.|||++...
T Consensus        73 ~~~d~~~~~~~l----~~~G~~~~~~~~~----~~~~~~~~DPdG~~iel~~~~~  119 (141)
T 1npb_A           73 AEEDFEPLSQRL----EQAGVTIWKQNKS----EGASFYFLDPDGHKLELHVGSL  119 (141)
T ss_dssp             CHHHHHHHHHHH----HHTTCCEEECCCS----SSEEEEEECTTCCEEEEEECCH
T ss_pred             CHHHHHHHHHHH----HHCCCeEeccCCC----ceeEEEEECCCCCEEEEEECch
Confidence            6  899999999    9999998876642    3589999999999999998754

>4gym_A Glyoxalase/bleomycin resistance protein/dioxygena; PSI-biology, midwest center for structural genomics, MCSG, oxidoreductase; HET: MSE; 1.56A {Conexibacter woesei}

Probab=99.67  E-value=4e-16  Score=117.82  Aligned_cols=125  Identities=16%  Similarity=0.190  Sum_probs=80.3

Q ss_pred             CCcceeeEEEEEEeCCHHHHHHHHHhhcCCEEEEEeecCCCceeEEEEecCCCCcceEEEeee---c--CCCCcccCCCC
Q 022818           18 KKDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTY---N--YGVTSYDIGTG   92 (291)
Q Consensus        18 ~~~~~~i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~---~--~~~~~~~~g~~   92 (291)
                      +....+|.||.|.|+|+++|++||++ ||+.......  ++..  .++..... ..+.+....   .  ........+.+
T Consensus         4 m~~~~rl~~V~L~V~Dl~~s~~FY~~-lg~~~~~~~~--~~~~--~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~   77 (149)
T 4gym_A            4 MASQSRLTFVNLPVADVAASQAFFGT-LGFEFNPKFT--DESC--ACMVVSEQ-AFVMLIDRARFADFTSKPIADATATT   77 (149)
T ss_dssp             ---CCCCEEEEEEESCHHHHHHHHHH-TTCEECGGGC--BTTE--EEEEEETT-EEEEEEEHHHHGGGCSSCBCCTTTCB
T ss_pred             CCCCccEEEEEEEeCCHHHHHHHHHH-hCCCcceeec--CCce--eEEeecCc-ceEeeeccccccccccccCCCCCCCC
Confidence            34567899999999999999999998 5655543322  2211  22221111 111111110   0  01111113345


Q ss_pred             ceEEEEEeC---CHHHHHHHHHHcCCeeecCCeecCCCceEEEEEECCCCCEEEEEeCCCC
Q 022818           93 FGHFAIATE---DVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRGPT  150 (291)
Q Consensus        93 ~~~i~~~v~---d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~Dp~G~~iel~~~~~~  150 (291)
                      ..|++|.|.   +++++++++++.|+++..+|.+.+++  +.+||+|||||+||++...+.
T Consensus        78 ~~~~a~~v~~~~~vd~~~~~~~~~g~~~~~~p~~~~~~--~~~~f~DPDGn~iEi~~~~p~  136 (149)
T 4gym_A           78 EAIVCVSAIDRDDVDRFADTALGAGGTVARDPMDYGFM--YGRSFHDLDGHLWEVMWMSAE  136 (149)
T ss_dssp             SCEEEEECSSHHHHHHHHHHHHHTTCEECSCCEECSSE--EEEEEECTTCCEEEEEEECTT
T ss_pred             eeEEEEEeccHHHHHHHHHHHHhcCceeeccccccCCE--EEEEEEcCCCCEEEEEEEChh
Confidence            679999995   58899999999999999988887654  358999999999999986543

>1ecs_A Bleomycin resistance protein; arm-exchange, antibiotic inhibitor; HET: PG4; 1.70A {Klebsiella pneumoniae} SCOP: d.32.1.2 PDB: 1ewj_A* 1niq_B* 1mh6_A

Probab=99.67  E-value=2.8e-15  Score=109.80  Aligned_cols=112  Identities=21%  Similarity=0.283  Sum_probs=83.3

Q ss_pred             eeEEEEEEeCCHHHHHHHHHhhcCCEEEEEeecCCCceeEEEEecCCCCcceEEEeeecCCCCcccCCCCceEEEEEeCC
Q 022818           23 RFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIATED  102 (291)
Q Consensus        23 ~i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~~~~i~~~v~d  102 (291)
                      ...++.|.|+|++++++||++ |||++...    ++  ...++..++    ..+.+.......   ...+..|++|.|+|
T Consensus         3 ~~~~~~l~v~D~~~a~~FY~~-LG~~~~~~----~~--~~~~~~~~~----~~l~l~~~~~~~---~~~~~~~~~~~v~d   68 (126)
T 1ecs_A            3 DQATPNLPSRDFDSTAAFYER-LGFGIVFR----DA--GWMILQRGD----LMLEFFAHPGLD---PLASWFSCCLRLDD   68 (126)
T ss_dssp             CEEEEEEEESCHHHHHHHHHT-TTCEEEEE----CS--SEEEEEETT----EEEEEEECTTCC---GGGCCCEEEEEESC
T ss_pred             ccEEEEEEeCCHHHHHHHHHH-CCCEEEec----CC--CEEEEEeCC----EEEEEEeCCCCC---CCCcceEEEEEECC
Confidence            346899999999999999998 99999765    12  234455442    223343322211   12367899999999


Q ss_pred             HHHHHHHHHHcCCee-------ecCCeecCCCceEEEEEECCCCCEEEEEeCCC
Q 022818          103 VYKLVENIRAKGGNV-------TREPGPLKGGTTHIAFVKDPDGYIFELIQRGP  149 (291)
Q Consensus       103 ~~~~~~~l~~~G~~~-------~~~~~~~~~g~~~~~~~~Dp~G~~iel~~~~~  149 (291)
                      +++++++|+++|+++       ..+|...++|... ++++||+||.|+|++...
T Consensus        69 v~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~g~~~-~~~~DPdG~~iel~~~~~  121 (126)
T 1ecs_A           69 LAEFYRQCKSVGIQETSSGYPRIHAPELQGWGGTM-AALVDPDGTLLRLIQNEL  121 (126)
T ss_dssp             HHHHHHHHHHTTCCBCSSSSSEEEEEEECTTSSEE-EEEECTTSCEEEEEECCC
T ss_pred             HHHHHHHHHHCCCccccccCccccCCcccCcccEE-EEEECCCCCEEEEecchh
Confidence            999999999999984       6667777777654 899999999999998754

>3fcd_A Lyase, ORF125EGC139; lactoylglutathione lyase, YECM, PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.92A {Uncultured bacterium} SCOP: d.32.1.0

Probab=99.67  E-value=2.1e-15  Score=111.76  Aligned_cols=118  Identities=13%  Similarity=0.163  Sum_probs=82.0

Q ss_pred             eeEEEEEEeCCHHHHHHHHHhhcCCEEEEEeecCCCceeEEEEecCCCCcceEEEeeecCCCCcccCCCCceEEEEEeCC
Q 022818           23 RFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIATED  102 (291)
Q Consensus        23 ~i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~~~~i~~~v~d  102 (291)
                      .-.+..|.|+|++++++||+++|||++....+  .    ..++..++    ..+.+...........+.+..|++|.|+|
T Consensus         7 ~~~~~~l~v~D~~~a~~FY~~~LG~~~~~~~~--~----~~~l~~~~----~~l~l~~~~~~~~~~~~~~~~~l~~~v~d   76 (134)
T 3fcd_A            7 HQITPFLHIPDMQEALTLFCDTLGFELKYRHS--N----YAYLELSG----CGLRLLEEPARKIIPDGIARVAICIDVSD   76 (134)
T ss_dssp             CEEEEEEEESCHHHHHHHHTTTTCCEEEEEET--T----EEEEEETT----EEEEEEECCCC---------EEEEEECSC
T ss_pred             hcceeEEEECCHHHHHHHHHhccCcEEEEeCC--C----eEEEEECC----EEEEEEeCCCCCcCCCCCceEEEEEEeCC
Confidence            44568999999999999999999999986542  1    35555443    23444433222111122245799999999


Q ss_pred             HHHHHHHHHHcC----CeeecCCeecCCCceEEEEEECCCCCEEEEEeCCCCC
Q 022818          103 VYKLVENIRAKG----GNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRGPTP  151 (291)
Q Consensus       103 ~~~~~~~l~~~G----~~~~~~~~~~~~g~~~~~~~~Dp~G~~iel~~~~~~~  151 (291)
                      +++++++|+++|    +++..+|...++|.+ .++|+||+||.|+|.+.....
T Consensus        77 v~~~~~~l~~~g~~~g~~i~~~~~~~~~g~~-~~~~~DPdG~~iel~~~~~~~  128 (134)
T 3fcd_A           77 IDSLHTKLSPALENLPADQVEPLKNMPYGQR-EFQVRMPDGDWLNFTAPLAEG  128 (134)
T ss_dssp             HHHHHHHHHHHHTTSCGGGEEEEEECTTSEE-EEEEECTTSCEEEEEEECCTT
T ss_pred             HHHHHHHHHhcCCccCCccccCCcccCCCcE-EEEEECCCCCEEEEEEccccc
Confidence            999999999665    445666777777655 489999999999999987543

>3e0r_A C3-degrading proteinase (CPPA protein); MCSG, PSI, SAD, structural GE protein structure initiative; 2.30A {Streptococcus pneumoniae}

Probab=99.66  E-value=1.4e-14  Score=114.65  Aligned_cols=208  Identities=13%  Similarity=0.069  Sum_probs=131.7

Q ss_pred             eeEEEEEEeCCHHHHHHHHHhhcCCEEEEEeecCCCceeEEEEecCCCCcceEEEeeecCCCCcccCCCCceEE---EEE
Q 022818           23 RFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHF---AIA   99 (291)
Q Consensus        23 ~i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~~~~i---~~~   99 (291)
                      .+-+..|.|+|.+++++||+++|||++..+..      ..+.|+.++....++++-......   ..-.|..|+   ++.
T Consensus        10 ~~~~p~LrV~nr~~~~~FY~~vlG~kll~ee~------~~a~lg~~~~~~~L~lEEsp~~~~---~~~~Glkh~a~i~i~   80 (244)
T 3e0r_A           10 VRIIPTLKANNRKLNETFYIETLGMKALLEES------AFLSLGDQTGLEKLVLEEAPSMRT---RKVEGRKKLARLIVK   80 (244)
T ss_dssp             EEEEEEEEESSHHHHHHHHTTTTCCEEEEECS------SEEEEECTTCCEEEEEEECCTTTC---BCCCSSCSEEEEEEE
T ss_pred             EEEeeEEEECCHHHHHHHHHhccCcEEeeccC------cEEEeecCCCcceEEEEeCCCccc---ccccccceeeeEEEE
Confidence            35679999999999999999999999987654      367777644333344433221111   223466677   599


Q ss_pred             eCCHHHHHHHHHHcCCeeecCCeecCCCceEEEEEECCCCCEEEEEeCCCC---------C-------------CCceEE
Q 022818          100 TEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRGPT---------P-------------EPLCQV  157 (291)
Q Consensus       100 v~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~Dp~G~~iel~~~~~~---------~-------------~~~~~v  157 (291)
                      |++..++..-|.. +..+.. ......|.  .+|+.||+||.|++....+.         +             ..+ ||
T Consensus        81 vp~~~el~~lL~~-~~~~~~-~~~gdhgy--A~yl~dPEGn~ieiyae~d~~~l~~v~~~~~l~~~~~~~gLs~fti-~I  155 (244)
T 3e0r_A           81 VENPLEIEGILSK-TDSIHR-LYKGQNGY--AFEIFSPEDDLILIHAEDDIASLVEVGEKPEFQTDLASISLSKFEI-SM  155 (244)
T ss_dssp             ESSHHHHHHHHTT-CSCCSE-EEECSSSE--EEEEECTTCCEEEEECCSCGGGCEECSSCCCCCCCCSCCCCSSEEE-EE
T ss_pred             cCCHHHHHHHHhc-cccccc-ccccCCcE--EEEEECCCCCeEEEEEcCCHHHhhcccchhhccccccccCCCCcEE-EE
Confidence            9998877666555 544321 11222333  38999999999999875531         0             137 99


Q ss_pred             EeeeCChhhhHHHHHHhcCCeeeeeeccCCccceEEEeccccCCceeEEEEeeecCcce-eecCcceeEEEEEecchHHh
Q 022818          158 MLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTE-YTKGNAYAQVAISTDDVYKS  236 (291)
Q Consensus       158 ~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~-~~~~~~~~hi~~~v~di~~~  236 (291)
                      .|+|+|.+++  ||.+ +|+.           ..+.|.....            .+.+. ....-++..+-|.|+  +..
T Consensus       156 ~LnV~d~~~s--Fy~~-~~~~-----------~~~~F~~a~G------------~dl~~~~~~t~gLe~l~~~v~--~~d  207 (244)
T 3e0r_A          156 ELHLPTDIES--FLES-SEIG-----------ASLDFIPAQG------------QDLTVDNTVTWDLSMLKFLVN--ELD  207 (244)
T ss_dssp             EEEECTTCCC--SCCH-HHHT-----------TTEEEEECCC------------TTTTCCTTSBSSEEEEEEEES--SCC
T ss_pred             EEEcCchHHH--Hhhc-cCCc-----------ccEEEEcccC------------CCCCCCCCCccCceEEEEEeC--HHH
Confidence            9999999998  9986 4441           1233333111            11110 012237778888884  455


Q ss_pred             HHHHHHHHHHhCCeeecCCccCCCCCceEEEEECCCCceEEEee
Q 022818          237 AEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVD  280 (291)
Q Consensus       237 ~~~l~~~~~~~G~~~~~~~~~~~~~~~~~~~~~DpdG~~iel~~  280 (291)
                      ++.++..+++.|..+.   .     ...++.+.||.|+.|.|.+
T Consensus       208 l~~l~~~L~~~g~~id---k-----k~~~l~~~DpsgIeiwF~~  243 (244)
T 3e0r_A          208 IASLRQKFESTEYFIP---K-----SEKFFLGKDRNNVELWFEE  243 (244)
T ss_dssp             HHHHHHHTTTSCEECC---T-----TCCEEEEECTTSCEEEEEE
T ss_pred             HHHHHHHHHhCCceEc---c-----cCCEEEEECCCCCEEEEEE
Confidence            5555555588876431   1     1367889999999999975

>3zw5_A Glyoxalase domain-containing protein 5; lyase; 1.60A {Homo sapiens}

Probab=99.66  E-value=4.2e-16  Score=117.46  Aligned_cols=115  Identities=16%  Similarity=0.183  Sum_probs=80.9

Q ss_pred             CCceEEEeeeCChhhhHHHHHHhcCCeeeeeeccCCccceEEEeccccCCceeEEEEeeecCc---ceeecCcceeEEEE
Q 022818          152 EPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGV---TEYTKGNAYAQVAI  228 (291)
Q Consensus       152 ~~~~~v~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~---~~~~~~~~~~hi~~  228 (291)
                      .++.|+.|.|+|++++++||+++|||++....+   . ...  +..+.    ..+.+......   ......++..|++|
T Consensus        26 ~~i~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~---~-~~~--l~~g~----~~l~l~~~~~~~~~~~~~~~~g~~~~~~   95 (147)
T 3zw5_A           26 RRLDHIVMTVKSIKDTTMFYSKILGMEVMTFKE---D-RKA--LCFGD----QKFNLHEVGKEFEPKAAHPVPGSLDICL   95 (147)
T ss_dssp             EEEEEEEEEESCHHHHHHHHHHHHCCEEEEETT---T-EEE--EEETT----EEEEEEETTSCCSSCCSSCCTTCCEEEE
T ss_pred             ccccEEEEEeCCHHHHHHHHHHhcCCEEEecCC---C-ceE--EEECC----cEEEEEEcCCCcCcccCCCCCCCceEEE
Confidence            478999999999999999999999999875421   1 222  22222    23444332111   11123346789999


Q ss_pred             Eec-chHHhHHHHHHHHHHhCCeeecCCccCCCC--CceEEEEECCCCceEEEee
Q 022818          229 STD-DVYKSAEVVNLVTQELGGKITRQPGSIPGL--NTKITSFVDPDGWKTVLVD  280 (291)
Q Consensus       229 ~v~-di~~~~~~l~~~~~~~G~~~~~~~~~~~~~--~~~~~~~~DpdG~~iel~~  280 (291)
                      .+. |+++++++|    +++|+++...|...++.  ..+.+||+|||||+|||++
T Consensus        96 ~~~~dl~~~~~~l----~~~G~~~~~~p~~~~~~~g~~~~~~~~DPdGn~iEl~~  146 (147)
T 3zw5_A           96 ITEVPLEEMIQHL----KACDVPIEEGPVPRTGAKGPIMSIYFRDPDRNLIEVSN  146 (147)
T ss_dssp             ECSSCHHHHHHHH----HHTTCCCCEEEEEEEETTEEEEEEEEECTTCCEEEEEE
T ss_pred             EeccCHHHHHHHH----HHcCCceeeCcccccCCCCceEEEEEECCCCCEEEEec
Confidence            886 999999999    99999987666543221  1367999999999999987

>2qnt_A AGR_C_3434P, uncharacterized protein ATU1872; glyoxalase/bleomycin resistance protein/dioxygenase family R protein, PSI-2, MCSG; HET: MSE EPE; 1.40A {Agrobacterium tumefaciens str}

Probab=99.66  E-value=4e-16  Score=116.57  Aligned_cols=117  Identities=18%  Similarity=0.214  Sum_probs=84.5

Q ss_pred             cceeeEEEEEEeCCHHHHHHHHHhhcCCEEEEEeecCCCceeEEEEecCCCCcceEEEe-----ee--c-CCCCcccCCC
Q 022818           20 DKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVEL-----TY--N-YGVTSYDIGT   91 (291)
Q Consensus        20 ~~~~i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-----~~--~-~~~~~~~~g~   91 (291)
                      .++++.|+.|.|+|++++.+||+++|||++....+  .    ...+..     .+.+..     ..  + ........+.
T Consensus         5 ~~~~l~~v~l~v~D~~~a~~FY~~~LG~~~~~~~~--~----~~~~~~-----g~~l~~~~~~~~~~~~~~~~~~~~~~~   73 (141)
T 2qnt_A            5 QGMRFVNPIPFVRDINRSKSFYRDRLGLKILEDFG--S----FVLFET-----GFAIHEGRSLEETIWRTSSDAQEAYGR   73 (141)
T ss_dssp             CSCCCCCCCCEESCHHHHHHHHHHTTCCCEEEECS--S----EEEETT-----SCEEEEHHHHHHHHHSCCC--CCCSCC
T ss_pred             cccccceEEEEECCHHHHHHHHHHhcCCEEEEEcC--C----cEEEec-----cceeccCchhhhhccccCCccccccCC
Confidence            46789999999999999999999999999875431  1    123321     122221     01  0 1111122345


Q ss_pred             CceEEEEEeCCHHHHHHHHHHcCCeeecCCeecCCCceEEEEEECCCCCEEEEEeCCC
Q 022818           92 GFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRGP  149 (291)
Q Consensus        92 ~~~~i~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~Dp~G~~iel~~~~~  149 (291)
                      +..|++|.|+|+++++++|++ |+++..+|...++|.. .++++||+||.|||++..+
T Consensus        74 ~~~~~~~~v~dv~~~~~~l~~-G~~~~~~~~~~~~g~~-~~~~~DPdG~~iel~~~~~  129 (141)
T 2qnt_A           74 RNMLLYFEHADVDAAFQDIAP-HVELIHPLERQAWGQR-VFRFYDPDGHAIEVGESLS  129 (141)
T ss_dssp             SSCEEEEEESCHHHHHC-CGG-GSCEEEEEEECTTSCE-EEEEECTTCCEEEEEECC-
T ss_pred             CceEEEEEeCcHHHHHHHHHc-CCccccCCccCCCCCE-EEEEECCCCCEEEEEecch
Confidence            788999999999999999999 9998888888877755 4899999999999998764

>1qto_A Bleomycin-binding protein; arm-exchange, antibiotic inhibitor; 1.50A {Streptomyces verticillus} SCOP: d.32.1.2 PDB: 1jie_A* 1jif_A

Probab=99.65  E-value=1.6e-15  Score=110.52  Aligned_cols=108  Identities=15%  Similarity=0.079  Sum_probs=81.2

Q ss_pred             eEEEEEEeCCHHHHHHHHHhhcCCEEEEEeecCCCceeEEEEecCCCCcceEEEeeecCCCCcccCCCCceEEEEEeCCH
Q 022818           24 FLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIATEDV  103 (291)
Q Consensus        24 i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~~~~i~~~v~d~  103 (291)
                      -.++.|.|+|++++.+||+++|||++....   + .  ..++..++    ..+.+...... +   ..+..|++|.|+|+
T Consensus         6 ~~~~~l~v~D~~~a~~FY~~~LG~~~~~~~---~-~--~~~~~~~~----~~l~l~~~~~~-~---~~~~~~~~~~v~dv   71 (122)
T 1qto_A            6 GAVPVLTAVDVPANVSFWVDTLGFEKDFGD---R-D--FAGVRRGD----IRLHISRTEHQ-I---VADNTSAWIEVTDP   71 (122)
T ss_dssp             CCCCEEEESSHHHHHHHHHHTTCCEEEEEC---S-S--EEEEEETT----EEEEEEECSCH-H---HHTTCEEEEEESCH
T ss_pred             ceeEEEEcCCHHHHHHHHHhccCcEEeeCC---C-C--EEEEEECC----EEEEEEcCCCC-C---CCCceEEEEEECCH
Confidence            357999999999999999999999997641   2 1  34454432    22334332211 1   11346999999999


Q ss_pred             HHHHHHHHHc------CC--eeecCCeecCCCceEEEEEECCCCCEEEEEeC
Q 022818          104 YKLVENIRAK------GG--NVTREPGPLKGGTTHIAFVKDPDGYIFELIQR  147 (291)
Q Consensus       104 ~~~~~~l~~~------G~--~~~~~~~~~~~g~~~~~~~~Dp~G~~iel~~~  147 (291)
                      ++++++|+++      |+  ++..+|...++| . .++++||+||.|+|.+.
T Consensus        72 d~~~~~l~~~~~~~~~G~~~~~~~~~~~~~~g-~-~~~~~DPdG~~iel~~~  121 (122)
T 1qto_A           72 DALHEEWARAVSTDYADTSGPAMTPVGESPAG-R-EFAVRDPAGNCVHFTAG  121 (122)
T ss_dssp             HHHHHHHTTTSCSCTTCTTSCEECCCEEETTE-E-EEEEECTTSCEEEEEEC
T ss_pred             HHHHHHHHhhccccccCccccccCCCcCCCCC-c-EEEEECCCCCEEEEecC
Confidence            9999999999      99  888888887877 4 48999999999999975

>3lm4_A Catechol 2,3-dioxygenase; NYSGXRC, PSI-II, protein structure initiative, 2hydroxyl 6 OXO 6 phenyl hexa 2-4 dienoic acid, peroxide; HET: HPX; 1.80A {Rhodococcus jostii}

Probab=99.65  E-value=5.1e-15  Score=127.00  Aligned_cols=123  Identities=14%  Similarity=0.103  Sum_probs=93.4

Q ss_pred             CcceeeEEEEEEeCCHHHHHHHHHhhcCCEEEEEeecCCCceeEEEEecCCCCcceEEEeeecCCCCcccCCCCceEEEE
Q 022818           19 KDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAI   98 (291)
Q Consensus        19 ~~~~~i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~~~~i~~   98 (291)
                      ..+.+|+|+.|.|+|++++.+||+++|||++..... .++.....++..++...  .+.+.....    ....+++|++|
T Consensus       149 ~~~~~l~Hv~l~v~D~~~a~~FY~~vLG~~~~~~~~-~~g~~~~~~l~~~~~~~--~l~~~~~~~----~~~~~~~Hiaf  221 (339)
T 3lm4_A          149 IPVKRIDHLNLMSSDVTAVKDSFERHLGFRTTERVV-DGNVEIGAWMSSNLLGH--EVACMRDMT----GGHGKLHHLAF  221 (339)
T ss_dssp             SCCCEEEEEEEEESCHHHHHHHHHHHHCCEEEEEEE-ETTEEEEEEEESSSSSC--SEEEEECTT----SCCSEEEEEEE
T ss_pred             CCcceeeeEEEEcCCHHHHHHHHHHhCCCeEEEEEe-cCCcEEEEEEEeCCCce--EEEEeccCC----CCCCceeEEEE
Confidence            368999999999999999999999999999987654 33334556666544322  233333211    12336899999


Q ss_pred             EeCC---HHHHHHHHHHcCCeeecCCeecCCCceEEEEEECCCCCEEEEEeCC
Q 022818           99 ATED---VYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRG  148 (291)
Q Consensus        99 ~v~d---~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~Dp~G~~iel~~~~  148 (291)
                      .|+|   +++++++|+++|+++...|.....+...++||+||+||+||++...
T Consensus       222 ~v~d~~~v~~~~~~l~~~G~~i~~~p~~~~~~~~~~~y~~DPdG~~iEl~~~~  274 (339)
T 3lm4_A          222 FYGTGQHNIDAVEMFRDYDIQIEAGPDKHGITQSQFLYVFEPGGNRIELFGEA  274 (339)
T ss_dssp             ECCCHHHHHHHHHHHHHTTCEEEEEEEEETGGGEEEEEEECTTSCEEEEECCC
T ss_pred             EeCCHHHHHHHHHHHHHCCCeEEeCCcccccCCceEEEEEcCCCCEEEEEEcC
Confidence            9999   8889999999999988777765555556799999999999998654

>4gym_A Glyoxalase/bleomycin resistance protein/dioxygena; PSI-biology, midwest center for structural genomics, MCSG, oxidoreductase; HET: MSE; 1.56A {Conexibacter woesei}

Probab=99.65  E-value=1e-15  Score=115.58  Aligned_cols=119  Identities=22%  Similarity=0.206  Sum_probs=77.3

Q ss_pred             CCCCceEEEeeeCChhhhHHHHHHhcCCeeeeeeccCCccceEEEeccccCCceeEEEEeeec------C-cceeecCcc
Q 022818          150 TPEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNY------G-VTEYTKGNA  222 (291)
Q Consensus       150 ~~~~~~~v~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~------~-~~~~~~~~~  222 (291)
                      ...++.||+|.|+|+++|++||++ ||+........+.  .......  .   ...+.+....      . ......+.+
T Consensus         6 ~~~rl~~V~L~V~Dl~~s~~FY~~-lg~~~~~~~~~~~--~~~~~~~--~---~~~~~~~~~~~~~~~~~~~~~~~~~~~   77 (149)
T 4gym_A            6 SQSRLTFVNLPVADVAASQAFFGT-LGFEFNPKFTDES--CACMVVS--E---QAFVMLIDRARFADFTSKPIADATATT   77 (149)
T ss_dssp             -CCCCEEEEEEESCHHHHHHHHHH-TTCEECGGGCBTT--EEEEEEE--T---TEEEEEEEHHHHGGGCSSCBCCTTTCB
T ss_pred             CCccEEEEEEEeCCHHHHHHHHHH-hCCCcceeecCCc--eeEEeec--C---cceEeeeccccccccccccCCCCCCCC
Confidence            356899999999999999999988 5555443332222  2222222  1   1222221110      0 001123345


Q ss_pred             eeEEEEEecc---hHHhHHHHHHHHHHhCCeeecCCccCCCCCceEEEEECCCCceEEEeech
Q 022818          223 YAQVAISTDD---VYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNE  282 (291)
Q Consensus       223 ~~hi~~~v~d---i~~~~~~l~~~~~~~G~~~~~~~~~~~~~~~~~~~~~DpdG~~iel~~~~  282 (291)
                      ..|++|.|++   ++++++++    +++|+++..+|...++  ++.+||+|||||+|||+...
T Consensus        78 ~~~~a~~v~~~~~vd~~~~~~----~~~g~~~~~~p~~~~~--~~~~~f~DPDGn~iEi~~~~  134 (149)
T 4gym_A           78 EAIVCVSAIDRDDVDRFADTA----LGAGGTVARDPMDYGF--MYGRSFHDLDGHLWEVMWMS  134 (149)
T ss_dssp             SCEEEEECSSHHHHHHHHHHH----HHTTCEECSCCEECSS--EEEEEEECTTCCEEEEEEEC
T ss_pred             eeEEEEEeccHHHHHHHHHHH----HhcCceeeccccccCC--EEEEEEEcCCCCEEEEEEEC
Confidence            5799999965   55666666    9999999999987765  58899999999999998643

>3hpy_A Catechol 2,3-dioxygenase; repeated motifs, aromatic hydrocarbons catabolism, iron, oxidoreductase; 1.94A {Pseudomonas SP} PDB: 3hpv_A 3hq0_A*

Probab=99.65  E-value=9.5e-15  Score=123.72  Aligned_cols=122  Identities=16%  Similarity=0.172  Sum_probs=91.5

Q ss_pred             CcceeeEEEEEEeCCHHHHHHHHHhhcCCEEEEEeecCC-CceeEEEEecCCCCcceEEEeeecCCCCcccCCCCceEEE
Q 022818           19 KDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPE-EKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFA   97 (291)
Q Consensus        19 ~~~~~i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~~~~i~   97 (291)
                      ..+.+|+||.|.|+|++++.+||+++|||++......+. +.....++..++....  +.+....      ...+.+|++
T Consensus       147 ~~~~~i~Hv~l~v~D~~~~~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~------~~~~~~Hia  218 (309)
T 3hpy_A          147 IAPIQLDHCLLYGPNIAEVQKIFTEVLGFYLVERVLSPDGDSDMGIWLSCSHKVHD--IAFVEYP------EKGKLHHCS  218 (309)
T ss_dssp             SCCSEEEEEEEEESCHHHHHHHHHHTSCCEEEEEEECSSSCSEEEEEEESSSSSCS--EEEEECS------STTEEEEEE
T ss_pred             cccceeeeEEEEeCCHHHHHHHHHHhcCCEEEEEEecCCCCceEEEEEecCCCcee--EEEecCC------CCCceeEEE
Confidence            468999999999999999999999999999987655433 2345566665443222  2222211      123589999


Q ss_pred             EEeCCHH---HHHHHHHHcCCeeecCCeecCCCceEEEEEECCCCCEEEEEeCC
Q 022818           98 IATEDVY---KLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRG  148 (291)
Q Consensus        98 ~~v~d~~---~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~Dp~G~~iel~~~~  148 (291)
                      |.|+|++   +++++|+++|+++...|.....+...++|++||+||+||+....
T Consensus       219 f~v~d~~~v~~~~~~l~~~G~~~~~~p~~~~~~~~~~~y~~DPdG~~iE~~~~g  272 (309)
T 3hpy_A          219 FLLESWEQVLRAGDIMSMNEVNVDIGPTRHGVTRGCTIYAWDPSGNRFETFMGG  272 (309)
T ss_dssp             EECSSHHHHHHHHHHHHHTTCCBSSCSEECSSSSEEEEEEECTTSCEEEEEEEC
T ss_pred             EECCCHHHHHHHHHHHHHCCCEEEeCCccCCCCccEEEEEECCCCCEEEEEeCC
Confidence            9998865   46789999999988777766655556699999999999998874

>2qnt_A AGR_C_3434P, uncharacterized protein ATU1872; glyoxalase/bleomycin resistance protein/dioxygenase family R protein, PSI-2, MCSG; HET: MSE EPE; 1.40A {Agrobacterium tumefaciens str}

Probab=99.64  E-value=3.2e-16  Score=117.08  Aligned_cols=116  Identities=16%  Similarity=0.204  Sum_probs=83.6

Q ss_pred             CCCceEEEeeeCChhhhHHHHHHhcCCeeeeeeccCCccceEEEeccccCCceeEEEE-----eee---cCcceeecCcc
Q 022818          151 PEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLEL-----TYN---YGVTEYTKGNA  222 (291)
Q Consensus       151 ~~~~~~v~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l-----~~~---~~~~~~~~~~~  222 (291)
                      .+++.|+.|.|+|++++.+||+++|||++....+    .+  ..+.  .   +..+..     ...   ........+.+
T Consensus         6 ~~~l~~v~l~v~D~~~a~~FY~~~LG~~~~~~~~----~~--~~~~--~---g~~l~~~~~~~~~~~~~~~~~~~~~~~~   74 (141)
T 2qnt_A            6 GMRFVNPIPFVRDINRSKSFYRDRLGLKILEDFG----SF--VLFE--T---GFAIHEGRSLEETIWRTSSDAQEAYGRR   74 (141)
T ss_dssp             SCCCCCCCCEESCHHHHHHHHHHTTCCCEEEECS----SE--EEET--T---SCEEEEHHHHHHHHHSCCC--CCCSCCS
T ss_pred             ccccceEEEEECCHHHHHHHHHHhcCCEEEEEcC----Cc--EEEe--c---cceeccCchhhhhccccCCccccccCCC
Confidence            4678999999999999999999999999875431    11  2222  1   122321     010   01111123457


Q ss_pred             eeEEEEEecchHHhHHHHHHHHHHhCCeeecCCccCCCCCceEEEEECCCCceEEEeechh
Q 022818          223 YAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNED  283 (291)
Q Consensus       223 ~~hi~~~v~di~~~~~~l~~~~~~~G~~~~~~~~~~~~~~~~~~~~~DpdG~~iel~~~~~  283 (291)
                      ..|++|.|+|+++++++|    ++ |+++..+|...++ +.+.+||+|||||.|||++...
T Consensus        75 ~~~~~~~v~dv~~~~~~l----~~-G~~~~~~~~~~~~-g~~~~~~~DPdG~~iel~~~~~  129 (141)
T 2qnt_A           75 NMLLYFEHADVDAAFQDI----AP-HVELIHPLERQAW-GQRVFRFYDPDGHAIEVGESLS  129 (141)
T ss_dssp             SCEEEEEESCHHHHHC-C----GG-GSCEEEEEEECTT-SCEEEEEECTTCCEEEEEECC-
T ss_pred             ceEEEEEeCcHHHHHHHH----Hc-CCccccCCccCCC-CCEEEEEECCCCCEEEEEecch
Confidence            789999999999999999    99 9999888887775 4589999999999999998754

>1mpy_A Catechol 2,3-dioxygenase; extradiol dioxygenase, non heme iron dioxygenase, metapyrocatechase, oxidoreductase; 2.80A {Pseudomonas putida} SCOP: d.32.1.3 d.32.1.3

Probab=99.63  E-value=6.6e-15  Score=124.55  Aligned_cols=146  Identities=19%  Similarity=0.258  Sum_probs=98.3

Q ss_pred             CcceeeEEEEEEeCCHHHHHHHHHhhcCCEEEEEeecCCCceeEEEEecCCCCcceEEEeeecCCCCcccCCCC-ceEEE
Q 022818           19 KDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTG-FGHFA   97 (291)
Q Consensus        19 ~~~~~i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~-~~~i~   97 (291)
                      +++++|+|+.|.|+|++++++||+++|||++........+.....++..+.....  +.+...       ...+ ..|++
T Consensus       146 ~~~~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~l~~~~~~~~--~~~~~~-------~~~g~~~hi~  216 (307)
T 1mpy_A          146 MAAVRFDHALMYGDELPATYDLFTKVLGFYLAEQVLDENGTRVAQFLSLSTKAHD--VAFIHH-------PEKGRLHHVS  216 (307)
T ss_dssp             TCCCEEEEEEEEESCHHHHHHHHHHTTCCEEEEEEECTTCCEEEEEEESSSBSCS--EEEEEC-------SSSSEEEEEE
T ss_pred             CCcCceeeEEEEcCCHHHHHHHHHHHcCCeeEeeeecCCCcEEEEEEEcCCCcee--EEEecC-------CCCCcceEEE
Confidence            4689999999999999999999999999998765432222112234444332222  222221       1224 78999


Q ss_pred             EEeC---CHHHHHHHHHHcCCeeecCCeecCCCceEEEEEECCCCCEEEEEeCCCCCCC-ceEEEeeeCChhhhHHHHHH
Q 022818           98 IATE---DVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRGPTPEP-LCQVMLRVGDLGRSIKFYEK  173 (291)
Q Consensus        98 ~~v~---d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~Dp~G~~iel~~~~~~~~~-~~~v~l~v~d~~~~~~fy~~  173 (291)
                      |.|+   |+++++++|+++|+++...|.....+..+.+||+||+||+|||++....... -..+.....++.+...||..
T Consensus       217 f~v~d~~dv~~~~~~l~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~  296 (307)
T 1mpy_A          217 FHLETWEDLLRAADLISMTDTSIDIGPTRHGLTHGKTIYFFDPSGNRNEVFCGGDYNYPDHKPVTWTTDQLGKAIFYHDR  296 (307)
T ss_dssp             EECSCHHHHHHHHHHHHHHTCCEEEEEEECSSTTCEEEEEECTTSCEEEEEECCCBCCTTSCCEEEEGGGHHHHHCTTTC
T ss_pred             EEcCCHHHHHHHHHHHHHCCCceeeCCccCCCCCceEEEEECCCCcEEEEEecccccCCCCCCeEeecccccccceecCc
Confidence            9999   5777889999999998776666544433458999999999999987532111 11123456677766666654

>2rk9_A Glyoxalase/bleomycin resistance protein/dioxygena; NYSGXRC, structural genomics, protein structur initiative II; 1.60A {Vibrio splendidus}

Probab=99.63  E-value=4.3e-15  Score=111.54  Aligned_cols=117  Identities=16%  Similarity=0.093  Sum_probs=79.2

Q ss_pred             eEEEeeeCChhhhHHHHHHhcCCeeeeeeccCCccceEEEeccccCCceeEEEEeeec--Cc------ceeecCcceeEE
Q 022818          155 CQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNY--GV------TEYTKGNAYAQV  226 (291)
Q Consensus       155 ~~v~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~--~~------~~~~~~~~~~hi  226 (291)
                      ..+.|.|+|++++.+||+++|||++......  ..+  .++..+    ...+.+....  +.      ...+.+.+. ++
T Consensus         7 ~~~~l~v~Dl~~s~~FY~~~LG~~~~~~~~~--~~~--~~l~~g----~~~l~l~~~~~~~~~~~~~~~~~~~~~g~-~~   77 (145)
T 2rk9_A            7 VVPELYCFDINVSQSFFVDVLGFEVKYERPD--EEF--VYLTLD----GVDVMLEGIAGKSRKWLSGDLEFPLGSGV-NF   77 (145)
T ss_dssp             EEEEEEESSHHHHHHHHHHTTCCEEEEEEGG--GTE--EEEEET----TEEEEEEEC-----------CCSSTTTTE-EE
T ss_pred             ceEEEEECCHHHHHHHHHhccCCEEEeecCC--CCE--EEEEcC----CeEEEEEeccCCCcccccCccccCCCCce-EE
Confidence            4578999999999999999999998743221  123  333322    2344443321  10      011223454 49


Q ss_pred             EEEecchHHhHHHHHHHHHH-hCCeeecCCccCC------CCCceEEEEECCCCceEEEeechhh
Q 022818          227 AISTDDVYKSAEVVNLVTQE-LGGKITRQPGSIP------GLNTKITSFVDPDGWKTVLVDNEDF  284 (291)
Q Consensus       227 ~~~v~di~~~~~~l~~~~~~-~G~~~~~~~~~~~------~~~~~~~~~~DpdG~~iel~~~~~~  284 (291)
                      +|.|+|+++++++|    ++ +|+++..+|...+      ..+++.++|+|||||+|||++....
T Consensus        78 ~~~v~dvd~~~~~l----~~~~G~~~~~~~~~~~~g~~~~~~~~~~~~~~DPdG~~iel~~~~~~  138 (145)
T 2rk9_A           78 QWDVIDIEPLYQRV----NESAADSIYLALESKSYQCGDSIATQKQFMVQTPDGYLFRFCQDIHE  138 (145)
T ss_dssp             EEECSCHHHHHHHH----HHHHGGGEEEEEEEEEC-----CCEEEEEEEECTTCCEEEEEEC---
T ss_pred             EEEECCHHHHHHHH----HhhCCCeEecCccccccccCCCCCcceEEEEECCCCCEEEEEEcCCC
Confidence            99999999999999    99 9999887776422      2235889999999999999987653

>3bt3_A Glyoxalase-related enzyme, ARAC type; VOC superfamily, PSI-2, NYSGXRC, structural genomics, prote structure initiative; 2.50A {Clostridium phytofermentans}

Probab=99.63  E-value=8.4e-15  Score=110.37  Aligned_cols=119  Identities=18%  Similarity=0.164  Sum_probs=81.1

Q ss_pred             CcceeeEEEEEEeCCHHHHHHHHHhhcCCEEEEEeecCCCceeEEEEecCCCCcceEEEeeecCCCCcccC--C------
Q 022818           19 KDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDI--G------   90 (291)
Q Consensus        19 ~~~~~i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~--g------   90 (291)
                      .+++++.|+.|.|+|++++.+||+++|||++.......++ ..  ++  +.   .  +.+...........  +      
T Consensus        17 ~~~~~~~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~-~~--~~--g~---~--l~l~~~~~~~~~~~~~~~~~~~g   86 (148)
T 3bt3_A           17 GYVVRENGPVYFTKDMDKTVKWFEEILGWSGDIVARDDEG-FG--DY--GC---V--FDYPSEVAVAHLTPFRGFHLFKG   86 (148)
T ss_dssp             SCEEEECCCEEEESCHHHHHHHHHHTTCCEEEEEEECTTS-CE--EE--EE---E--ESSCTTTTSCC--CCCSEEEEES
T ss_pred             CceEEeeeEEEEECCHHHHHHHHHhccCCEEEeeeecCCC-cc--EE--cc---E--EEEeccCCCcccccccccceeec
Confidence            3578999999999999999999999999998642211121 12  12  21   1  33311111000000  1      


Q ss_pred             -CCceEEEE-EeCCHHHHHHHHHHcCCeeecCCeecCCCceEEEEEECCCCCEEEEEeCC
Q 022818           91 -TGFGHFAI-ATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRG  148 (291)
Q Consensus        91 -~~~~~i~~-~v~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~Dp~G~~iel~~~~  148 (291)
                       ....+.+| .|+|+++++++|+++|+++..+|...++|.. .++|+||+||.|+|++..
T Consensus        87 ~~~~~~~~~~~v~dvd~~~~~l~~~G~~~~~~~~~~~~g~~-~~~~~DPdG~~iel~~~~  145 (148)
T 3bt3_A           87 EPIKGVAGFMMIEGIDALHKYVKENGWDQISDIYTQPWGAR-ECSITTTDGCILRFFESI  145 (148)
T ss_dssp             CCCSSEEEEEEEECHHHHHHHHHHTTCCCBCCCEEETTTEE-EEEEECTTSCEEEEEEEC
T ss_pred             cCCCccEEEEEcCCHHHHHHHHHHcCCccccCcccCCCccE-EEEEECCCCCEEEEeeec
Confidence             11122255 9999999999999999998888888887654 489999999999999854

>1f1u_A Homoprotocatechuate 2,3-dioxygenase; extradiol, manganese, biodegradation, aromatic, oxidoreductase; 1.50A {Arthrobacter globiformis} SCOP: d.32.1.3 d.32.1.3 PDB: 1f1r_A 1f1v_A* 1f1x_A

Probab=99.62  E-value=1.8e-14  Score=122.73  Aligned_cols=120  Identities=19%  Similarity=0.230  Sum_probs=90.0

Q ss_pred             CcceeeEEEEEEeCCHHHHHHHHHhhcCCEEEEEeecCCCceeEEEEecCCCCcceEEEeeecCCCCcccCCCCceEEEE
Q 022818           19 KDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAI   98 (291)
Q Consensus        19 ~~~~~i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~~~~i~~   98 (291)
                      ..+.+|+|+.|.|+|++++.+|| ++|||++.......++.....++..++...  .+.+...       .+.+++|++|
T Consensus       148 ~~~~~l~Hv~l~v~D~~~a~~FY-~~LGf~~~~~~~~~~g~~~~~f~~~~~~~~--~~~~~~~-------~~~~~~Hiaf  217 (323)
T 1f1u_A          148 GELVRLDHFNQVTPDVPRGRAYL-EDLGFRVSEDIKDSDGVTYAAWMHRKQTVH--DTALTGG-------NGPRMHHVAF  217 (323)
T ss_dssp             TCCCEEEEEEEEESCHHHHHHHH-HHTTCEEEEEEECTTCCEEEEEEESSSSSC--SEEEEES-------SBSEEEEEEE
T ss_pred             CCCceeeeEEEecCCHHHHHHHH-HhCCCeEEEEEEcCCCcEEEEEEEcCCCcc--cEEEeCC-------CCCCceEEEE
Confidence            56899999999999999999999 999999987655444444556665543221  2333321       1237899999


Q ss_pred             EeCCHHH---HHHHHHHcCC--eeecCCeecCCCceEEEEEECCCCCEEEEEeCC
Q 022818           99 ATEDVYK---LVENIRAKGG--NVTREPGPLKGGTTHIAFVKDPDGYIFELIQRG  148 (291)
Q Consensus        99 ~v~d~~~---~~~~l~~~G~--~~~~~~~~~~~g~~~~~~~~Dp~G~~iel~~~~  148 (291)
                      .|+|+++   ++++|+++|+  ++...|.....+...++|++||+||.||++...
T Consensus       218 ~v~d~d~v~~~~~~l~~~G~~~~i~~~p~~~~~~~~~~~y~~DPdG~~iE~~~~~  272 (323)
T 1f1u_A          218 ATHEKHNIIQICDKMGALRISDRIERGPGRHGVSNAFYLYILDPDGHRIEIYTQD  272 (323)
T ss_dssp             ECSSHHHHHHHHHHHHHTTCGGGEEEEEEECSTTCCEEEEEECTTCCEEEEEECC
T ss_pred             ECCCHHHHHHHHHHHHHCCCccccccCCCccCCCCcEEEEEECCCCCEEEEEeCC
Confidence            9999988   9999999999  887655554444445689999999999998754

>2rk9_A Glyoxalase/bleomycin resistance protein/dioxygena; NYSGXRC, structural genomics, protein structur initiative II; 1.60A {Vibrio splendidus}

Probab=99.61  E-value=9.6e-15  Score=109.62  Aligned_cols=116  Identities=17%  Similarity=0.269  Sum_probs=77.9

Q ss_pred             EEEEEEeCCHHHHHHHHHhhcCCEEEEEeecCCCceeEEEEecCCCCcceEEEeeec---CC-----CCcccCCCCceEE
Q 022818           25 LHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYN---YG-----VTSYDIGTGFGHF   96 (291)
Q Consensus        25 ~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~---~~-----~~~~~~g~~~~~i   96 (291)
                      ..+.|.|+|++++++||+++|||++......  ..  ..++..++  ..  +.+...   ..     ......+.++. +
T Consensus         7 ~~~~l~v~Dl~~s~~FY~~~LG~~~~~~~~~--~~--~~~l~~g~--~~--l~l~~~~~~~~~~~~~~~~~~~~~g~~-~   77 (145)
T 2rk9_A            7 VVPELYCFDINVSQSFFVDVLGFEVKYERPD--EE--FVYLTLDG--VD--VMLEGIAGKSRKWLSGDLEFPLGSGVN-F   77 (145)
T ss_dssp             EEEEEEESSHHHHHHHHHHTTCCEEEEEEGG--GT--EEEEEETT--EE--EEEEEC-----------CCSSTTTTEE-E
T ss_pred             ceEEEEECCHHHHHHHHHhccCCEEEeecCC--CC--EEEEEcCC--eE--EEEEeccCCCcccccCccccCCCCceE-E
Confidence            4589999999999999999999998753322  22  34455442  22  222221   00     00111233554 9


Q ss_pred             EEEeCCHHHHHHHHHH-cCCeeecCCee-------cCCCceEEEEEECCCCCEEEEEeCCCC
Q 022818           97 AIATEDVYKLVENIRA-KGGNVTREPGP-------LKGGTTHIAFVKDPDGYIFELIQRGPT  150 (291)
Q Consensus        97 ~~~v~d~~~~~~~l~~-~G~~~~~~~~~-------~~~g~~~~~~~~Dp~G~~iel~~~~~~  150 (291)
                      +|.|+|+++++++|++ +|+++..+|..       ..++.. .++|+|||||+|||++....
T Consensus        78 ~~~v~dvd~~~~~l~~~~G~~~~~~~~~~~~g~~~~~~~~~-~~~~~DPdG~~iel~~~~~~  138 (145)
T 2rk9_A           78 QWDVIDIEPLYQRVNESAADSIYLALESKSYQCGDSIATQK-QFMVQTPDGYLFRFCQDIHE  138 (145)
T ss_dssp             EEECSCHHHHHHHHHHHHGGGEEEEEEEEEC-----CCEEE-EEEEECTTCCEEEEEEC---
T ss_pred             EEEECCHHHHHHHHHhhCCCeEecCccccccccCCCCCcce-EEEEECCCCCEEEEEEcCCC
Confidence            9999999999999999 99998877665       223333 48899999999999987543

>2zyq_A Probable biphenyl-2,3-DIOL 1,2-dioxygenase BPHC; extradiol, DHSA, TB, catechol, cholesterol, steroid, aromatic hydrocarbons catabolism; HET: TAR; 2.00A {Mycobacterium tuberculosis} PDB: 2zi8_A*

Probab=99.60  E-value=2.1e-14  Score=121.06  Aligned_cols=122  Identities=16%  Similarity=0.277  Sum_probs=88.1

Q ss_pred             CcceeeEEEEEEeCCHHHHHHHHHhhcCCEEEEEeecCC--------C-ceeEEEEecCCCCcceEEEeeecCCCCcccC
Q 022818           19 KDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPE--------E-KYSNAFLGFGPEQSHFVVELTYNYGVTSYDI   89 (291)
Q Consensus        19 ~~~~~i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~--------~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~   89 (291)
                      ..+++|+|+.|.|+|++++++||+++|||++......+.        + .....++..++....  +.+....      .
T Consensus       138 ~~~~~l~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~--~~~~~~~------~  209 (300)
T 2zyq_A          138 TGEQGMGHVVLSTRDDAEALHFYRDVLGFRLRDSMRLPPQMVGRPADGPPAWLRFFGCNPRHHS--LAFLPMP------T  209 (300)
T ss_dssp             CGGGCSCEEEEECSCHHHHHHHHHTTTCCEEEEEEEECGGGGTCCTTSCCEEEEEEESSSBSCS--EEEESSC------C
T ss_pred             cCCCccCeEEEEeCCHHHHHHHHHHhcCCEEeeeecccccccccCCCCCceEEEEEEECCCccE--EEEecCC------C
Confidence            357899999999999999999999999999875433221        1 224455554432222  3333211      1


Q ss_pred             CCCceEEEEEeCCHHH---HHHHHHHcCCeeecCCeecCCCceEEEEEECCCCCEEEEEeCC
Q 022818           90 GTGFGHFAIATEDVYK---LVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRG  148 (291)
Q Consensus        90 g~~~~~i~~~v~d~~~---~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~Dp~G~~iel~~~~  148 (291)
                      ..+.+|++|.|+|+++   ++++|+++|+++...|...+.+..+++||+||+||+|||++..
T Consensus       210 ~~g~~h~af~v~d~~~v~~~~~~l~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iEl~~~~  271 (300)
T 2zyq_A          210 SSGIVHLMVEVEQADDVGLCLDRALRRKVPMSATLGRHVNDLMLSFYMKTPGGFDIEFGCEG  271 (300)
T ss_dssp             SSSEEEEEEEBSSHHHHHHHHHHHHHTTCCEEEEEEEESSSCCEEEEEECTTSSEEEEEECC
T ss_pred             CCCceEEEEEeCCHHHHHHHHHHHHHCCCceeecccccCCCCeEEEEEECCCCCEEEEEeCC
Confidence            3467899999998655   6999999999988776665555445689999999999999854

>3oaj_A Putative ring-cleaving dioxygenase MHQO; structural genomics, protein structure initiative, PSI-biolo unknown function; 1.40A {Bacillus subtilis subsp}

Probab=99.60  E-value=1.1e-14  Score=124.45  Aligned_cols=124  Identities=15%  Similarity=0.225  Sum_probs=87.7

Q ss_pred             CCCceEEEeeeCChhhhHHHHHHhcCCeeeeeeccC--CccceEEEeccccCCceeEEEEeeecCcce-eecCcceeEEE
Q 022818          151 PEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKP--EYKYTLAMLGYAEEDQTTVLELTYNYGVTE-YTKGNAYAQVA  227 (291)
Q Consensus       151 ~~~~~~v~l~v~d~~~~~~fy~~~lG~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~-~~~~~~~~hi~  227 (291)
                      ..+|.||+|.|+|++++.+||+++|||+++......  .+.+.++ +....+..+..+++........ ....+++.|++
T Consensus         6 i~~i~Hv~l~v~Dl~~s~~FY~~vLGl~~v~~~~~~~~~~~~~l~-~~~~~g~~g~~l~l~~~~~~~~~~~~~~~~~hia   84 (335)
T 3oaj_A            6 TMGIHHITAIVGHPQENTDFYAGVLGLRLVKQTVNFDDPGTYHLY-FGNEGGKPGTIITFFPWAGARQGVIGDGQVGVTS   84 (335)
T ss_dssp             CCSEEEEEEEESCHHHHHHHHTTTTCCEEEEEEECSSCTTSEEEE-EESTTCCTTSEEEEEECTTCCBCBCCBSEEEEEE
T ss_pred             CCcccEEEEEeCCHHHHHHHHHHhcCCEEEeeecCCCCCceEEEE-EecCCCCCCcEEEEEECCCCCCCCCCCCceEEEE
Confidence            457999999999999999999999999988765332  2222233 3322222234566644332211 12234788999


Q ss_pred             EEec--chHHhHHHHHHHHHHhCCeeecCCccCCCCCceEEEEECCCCceEEEeechh
Q 022818          228 ISTD--DVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNED  283 (291)
Q Consensus       228 ~~v~--di~~~~~~l~~~~~~~G~~~~~~~~~~~~~~~~~~~~~DpdG~~iel~~~~~  283 (291)
                      |.|+  |++++.++|    +++|+++..  ..  ..+.+.+||+|||||.|||++...
T Consensus        85 f~V~~~dl~~~~~rL----~~~Gv~~~~--~~--~~g~~~~~f~DPdGn~iEl~~~~~  134 (335)
T 3oaj_A           85 YVVPKGAMAFWEKRL----EKFNVPYTK--IE--RFGEQYVEFDDPHGLHLEIVEREE  134 (335)
T ss_dssp             EEECTTCHHHHHHHH----HHTTCCCEE--EE--ETTEEEEEEECTTSCEEEEEECSC
T ss_pred             EEecHHHHHHHHHHH----HhCcceeee--ec--cCCcEEEEEECCCCCEEEEEEeCC
Confidence            9999  888888888    999999864  22  224689999999999999998753

>3bt3_A Glyoxalase-related enzyme, ARAC type; VOC superfamily, PSI-2, NYSGXRC, structural genomics, prote structure initiative; 2.50A {Clostridium phytofermentans}

Probab=99.60  E-value=4.7e-15  Score=111.78  Aligned_cols=116  Identities=16%  Similarity=0.152  Sum_probs=78.6

Q ss_pred             CCceEEEeeeCChhhhHHHHHHhcCCeeeeeeccCCccceEEEeccccCCceeEEEEeeecCcceeec--Cc-------c
Q 022818          152 EPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTK--GN-------A  222 (291)
Q Consensus       152 ~~~~~v~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~--~~-------~  222 (291)
                      .++.|+.|.|+|++++.+||+++|||++.......+ ++.+  ++      . .|.+...........  +.       .
T Consensus        20 ~~~~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~-~~~~--~g------~-~l~l~~~~~~~~~~~~~~~~~~~g~~~   89 (148)
T 3bt3_A           20 VRENGPVYFTKDMDKTVKWFEEILGWSGDIVARDDE-GFGD--YG------C-VFDYPSEVAVAHLTPFRGFHLFKGEPI   89 (148)
T ss_dssp             EEECCCEEEESCHHHHHHHHHHTTCCEEEEEEECTT-SCEE--EE------E-EESSCTTTTSCC--CCCSEEEEESCCC
T ss_pred             EEeeeEEEEECCHHHHHHHHHhccCCEEEeeeecCC-CccE--Ec------c-EEEEeccCCCcccccccccceeeccCC
Confidence            457899999999999999999999999853221111 1222  21      1 133311111000000  11       1


Q ss_pred             eeEEEE-EecchHHhHHHHHHHHHHhCCeeecCCccCCCCCceEEEEECCCCceEEEeech
Q 022818          223 YAQVAI-STDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNE  282 (291)
Q Consensus       223 ~~hi~~-~v~di~~~~~~l~~~~~~~G~~~~~~~~~~~~~~~~~~~~~DpdG~~iel~~~~  282 (291)
                      ..+.+| .|+|+++++++|    +++|+++..+|...++ +.+.+||+|||||.|||.+..
T Consensus        90 ~~~~~~~~v~dvd~~~~~l----~~~G~~~~~~~~~~~~-g~~~~~~~DPdG~~iel~~~~  145 (148)
T 3bt3_A           90 KGVAGFMMIEGIDALHKYV----KENGWDQISDIYTQPW-GARECSITTTDGCILRFFESI  145 (148)
T ss_dssp             SSEEEEEEEECHHHHHHHH----HHTTCCCBCCCEEETT-TEEEEEEECTTSCEEEEEEEC
T ss_pred             CccEEEEEcCCHHHHHHHH----HHcCCccccCcccCCC-ccEEEEEECCCCCEEEEeeec
Confidence            122255 999999999999    9999999888877775 468899999999999999864

>3oxh_A RV0577 protein; kinase regulation, antibiotic resistance, mycobacterium tube structural genomics, PSI, protein structure initiative; HET: PMB XYL; 1.75A {Mycobacterium tuberculosis}

Probab=99.59  E-value=1.1e-14  Score=121.77  Aligned_cols=123  Identities=19%  Similarity=0.127  Sum_probs=87.8

Q ss_pred             CCCCceEEEeeeCChhhhHHHHHHhcCCeeeeeeccCCc-cceEEEeccccCCceeEEEEeeecCcceeecCcceeEEEE
Q 022818          150 TPEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEY-KYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAI  228 (291)
Q Consensus       150 ~~~~~~~v~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~hi~~  228 (291)
                      .++.+.|+.|.|+|++++++||+++|||++.......+. .+..+...  .   .....+....+..+ ...++.++++|
T Consensus        29 ~~g~~~~v~l~v~D~~~a~~FY~~vlG~~~~~~~~~~~~~~~~~~~~~--g---~~~~~l~~~~~~~~-~~~~~~~~~~~  102 (282)
T 3oxh_A           29 RQGTPNWVDLQTTDQSAAKKFYTSLFGWGYDDNPVPGGGGVYSMATLN--G---EAVAAIAPMPPGAP-EGMPPIWNTYI  102 (282)
T ss_dssp             CTTSEEEEEEEESCHHHHHHHHHHHHCCEEEEEC-----CCEEEEEET--T---EEEEEEEECCSCC----CCCEEEEEE
T ss_pred             CCCCcEEEEEecCCHHHHHHHHHHhcCcEEeecCCCCCccCEEEEEeC--C---eeeEeeccCCCCCC-CCCCCcEEEEE
Confidence            346799999999999999999999999997755332110 34444332  1   12222322222111 12345689999


Q ss_pred             EecchHHhHHHHHHHHHHhCCeeecCCccCCCCCceEEEEECCCCceEEEeechh
Q 022818          229 STDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNED  283 (291)
Q Consensus       229 ~v~di~~~~~~l~~~~~~~G~~~~~~~~~~~~~~~~~~~~~DpdG~~iel~~~~~  283 (291)
                      .|+|++++++++    +++|+++..+|...+.. +++++|+||+||.|||++...
T Consensus       103 ~v~d~d~~~~~l----~~~G~~~~~~p~~~~~~-g~~~~~~DP~G~~i~l~~~~~  152 (282)
T 3oxh_A          103 AVDDVDAVVDKV----VPGGGQVMMPAFDIGDA-GRMSFITDPTGAAVGLWQANR  152 (282)
T ss_dssp             ECSCHHHHHTTT----TTTTCEEEEEEEEETTT-EEEEEEECTTCCEEEEEEESS
T ss_pred             EeCCHHHHHHHH----HHCCCEEEECCEecCCC-eEEEEEECCCCCEEEEEEccc
Confidence            999999999999    99999998888776653 589999999999999998765

>1kw3_B 2,3-dihydroxybiphenyl dioxygenase; four TIME repetitions of the beta-alpha-beta-BETA-beta motif oxidoreductase; 1.45A {Pseudomonas SP} SCOP: d.32.1.3 d.32.1.3 PDB: 1dhy_A 1eiq_A 1eir_A* 1eil_A 1kw6_B* 1kw8_B* 1kw9_B* 1kwb_B 1kwc_B*

Probab=99.58  E-value=5.2e-14  Score=118.13  Aligned_cols=121  Identities=20%  Similarity=0.252  Sum_probs=87.1

Q ss_pred             CcceeeEEEEEEeCCHHHHHHHHHhhcCCEEEEEeecC--CC-ceeEEEEecCCCCcceEEEeeecCCCCcccCCCCceE
Q 022818           19 KDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVP--EE-KYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGH   95 (291)
Q Consensus        19 ~~~~~i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~--~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~~~~   95 (291)
                      ..+++|+|+.|.|+|++++++||+++|||++......+  ++ .....++..++....  +.+....      ...+.+|
T Consensus       138 ~~~~~l~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~--~~~~~~~------~~~~~~h  209 (292)
T 1kw3_B          138 TGDQGIGHFVRCVPDTAKAMAFYTEVLGFVLSDIIDIQMGPETSVPAHFLHCNGRHHT--IALAAFP------IPKRIHH  209 (292)
T ss_dssp             CGGGCSCEEEEECSCHHHHHHHHHHTTCCEEEEEEEEEEETTEEEEEEEEESSSBSCS--EEEECCS------CSSSEEE
T ss_pred             cCCcccceEEEecCCHHHHHHHHHhccCCEEeeeeecccCCCccceEEEEEECCCcce--EEEecCC------CCCceEE
Confidence            45789999999999999999999999999987543321  11 123455554332212  2332211      1247899


Q ss_pred             EEEEeCCHHH---HHHHHHHcCCeeecCCeecCCCceEEEEEECCCCC-EEEEEeCC
Q 022818           96 FAIATEDVYK---LVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGY-IFELIQRG  148 (291)
Q Consensus        96 i~~~v~d~~~---~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~Dp~G~-~iel~~~~  148 (291)
                      ++|.|+|+++   ++++|+ +|+++...|...+.+...++||+||+|| +|||+...
T Consensus       210 iaf~v~d~~~v~~~~~~l~-~G~~~~~~p~~~~~~~~~~~y~~DPdG~~~iEl~~~~  265 (292)
T 1kw3_B          210 FMLQANTIDDVGYAFDRLD-AAGRITSLLGRHTNDQTLSFYADTPSPMIEVEFGWGP  265 (292)
T ss_dssp             EEEEBSSHHHHHHHHHHHH-HTTCBCBCSEEESSSCCEEEEEECSSTTCEEEEEECC
T ss_pred             EEEEcCCHHHHHHHHHHHh-CCCceeecCcccCCCCeEEEEEECCCCCeeEEEEECC
Confidence            9999998654   678999 9999888877666655556899999999 99999864

>3b59_A Glyoxalase/bleomycin resistance protein/dioxygena; 11004Z, NYSGXRC, PSI-2, structural genomics, Pro structure initiative; 2.53A {Novosphingobium aromaticivorans}

Probab=99.57  E-value=5.4e-14  Score=119.12  Aligned_cols=115  Identities=17%  Similarity=0.309  Sum_probs=88.5

Q ss_pred             CcceeeEEEEEEeCCHHHHHHHHHhhcCCEEEEEeecCCCceeEEEEecCCCCcceEEEeeecCCCCcccCCCCceEEEE
Q 022818           19 KDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAI   98 (291)
Q Consensus        19 ~~~~~i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~~~~i~~   98 (291)
                      .++++|+|+.|.|+|++++.+||+++|||++..+..  +   ...++..+....  .+.+...       . .+++|++|
T Consensus       137 ~~~~~l~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~--~---~~~fl~~~~~~~--~l~l~~~-------~-~g~~hi~f  201 (310)
T 3b59_A          137 GVPVKISHIVLHSPNHQDMVKFFTDVLGFKVSDWLG--D---FMCFLRCNSAHH--RIAILPG-------P-PCLNHVAY  201 (310)
T ss_dssp             CCCCEEEEEEEEETTHHHHHHHHHHTSCCEEEEEET--T---TEEEEESSSBSC--SEEEEES-------S-SEEEEEEE
T ss_pred             CcCcEeceEEEecCCHHHHHHHHHhCCCCEEEEeeC--C---eEEEEecCCCcc--eEEEECC-------C-CceEEEEE
Confidence            468999999999999999999999999999876532  1   245565543222  2333322       1 37899999


Q ss_pred             EeCCHHHH---HHHHHHcCCeeecCCeecCCCceEEEEEECCCCCEEEEEeCC
Q 022818           99 ATEDVYKL---VENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRG  148 (291)
Q Consensus        99 ~v~d~~~~---~~~l~~~G~~~~~~~~~~~~g~~~~~~~~Dp~G~~iel~~~~  148 (291)
                      .|+|++++   +++|+++|+++...|.....+...++|++||+||.||+.+..
T Consensus       202 ~v~d~d~~~~~~~~l~~~G~~~~~~p~~~~~~~~~~~y~~DPdG~~iE~~~~~  254 (310)
T 3b59_A          202 DMLSVDDMMRGAHRLKVKGIDIGWGPGRHTAGNNTFSYFVTPGGFVTEYTSEL  254 (310)
T ss_dssp             ECSSHHHHHHHHHHHHHTTCCCSEEEEECSTTCCEEEEEECTTSCEEEEEECC
T ss_pred             EcCCHHHHHHHHHHHHHcCCceeecCccccCCCcEEEEEECCCCCEEEEEeCc
Confidence            99997776   999999999988777665555555699999999999999865

>2wl9_A Catechol 2,3-dioxygenase; aromatic hydrocarbons catabolism, iron, oxidoreductase; 1.90A {Rhodococcus SP} PDB: 2wl3_A

Probab=99.56  E-value=3.3e-14  Score=120.17  Aligned_cols=121  Identities=13%  Similarity=0.239  Sum_probs=86.3

Q ss_pred             CcceeeEEEEEEeCCHHHHHHHHHhhcCCEEEEEeecC--CC-ceeEEEEecCCCCcceEEEeeecCCCCcccCCCCceE
Q 022818           19 KDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVP--EE-KYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGH   95 (291)
Q Consensus        19 ~~~~~i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~--~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~~~~   95 (291)
                      ..+++|+|+.|.|+|++++++|| ++|||++......+  ++ .....++..++....  +.+...      ....+.+|
T Consensus       142 ~~~~~i~hv~l~v~D~~~s~~FY-~vLG~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~--~~~~~~------~~~~~~~h  212 (305)
T 2wl9_A          142 TEGQGLGHIIIREDDVEEATRFY-RLLGLEGAVEYKFALPNGAVGTPVFMHCNDRHHS--LAFGVG------PMDKRINH  212 (305)
T ss_dssp             CTTTCSCEEEECCSCHHHHHHHH-HHHTCEEEECBCEECTTSCEECCEEEESSSSSCS--EEECCS------CCSSSEEE
T ss_pred             cCCceeeeEEEECCCHHHHHHHH-HHcCCeeeeeEecccCCCccceEEEEEcCCCceE--EEEecC------CCCCCceE
Confidence            35789999999999999999999 99999986532211  11 223445554432222  222211      01247899


Q ss_pred             EEEEeCC---HHHHHHHHHHcCCeeecCCeecCCCceEEEEEECCCCCEEEEEeCC
Q 022818           96 FAIATED---VYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRG  148 (291)
Q Consensus        96 i~~~v~d---~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~Dp~G~~iel~~~~  148 (291)
                      ++|.|+|   +++++++|+++|+++...|.....+...++||+||+||+||++...
T Consensus       213 iaf~v~d~~~v~~~~~~l~~~G~~~~~~p~~~~~~~~~~~y~~DPdG~~iEl~~~~  268 (305)
T 2wl9_A          213 LMIEYTHLDDLGYAHDLVRQQKIDVTLQIGKHSNDEALTFYCANPSGWLWEPGWGS  268 (305)
T ss_dssp             EEEEESSHHHHHHHHHHHHHTTCCEEEEEEECTTTCCEEEEEECTTSSEEEEEECC
T ss_pred             EEEEcCCHHHHHHHHHHHHHcCCCccccCcccCCCCcEEEEEECCCCCEEEEEeCC
Confidence            9999998   6678899999999988776666555555689999999999999864

>1lgt_A Biphenyl-2,3-DIOL 1,2-dioxygenase; extradiol dioxygenase, 2,3-dihydroxybiphenyl, non-heme iron, anaerobic, PCB biodegradation; HET: BP3; 1.70A {Burkholderia xenovorans} SCOP: d.32.1.3 d.32.1.3 PDB: 1kmy_A* 1knd_A 1knf_A 1han_A* 1lkd_A*

Probab=99.56  E-value=8.5e-14  Score=117.13  Aligned_cols=120  Identities=18%  Similarity=0.252  Sum_probs=87.6

Q ss_pred             cceeeEEEEEEeCCHHHHHHHHHhhcCCEEEEEeecC--CC-ceeEEEEecCCCCcceEEEeeecCCCCcccCCCCceEE
Q 022818           20 DKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVP--EE-KYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHF   96 (291)
Q Consensus        20 ~~~~i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~--~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~~~~i   96 (291)
                      .+++|+|+.|.|+|++++.+||+++|||++......+  .+ .....++..++....  +.+...  +    ...+.+|+
T Consensus       139 ~~~~l~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--l~l~~~--~----~~~~~~hi  210 (297)
T 1lgt_A          139 GEQGLGHFVRCVPDSDKALAFYTDVLGFQLSDVIDMKMGPDVTVPAYFLHCNERHHT--LAIAAF--P----LPKRIHHF  210 (297)
T ss_dssp             GGGCSCEEEEECSCHHHHHHHHHHTTCCEEEEEEEEEEETTEEEEEEEEESSSBSCS--EEEECC--C----CSSSEEEE
T ss_pred             CccccceEEEecCCHHHHHHHHHHhcCCeeeeEEeccCCCCccceEEEEEeCCCcce--EEEEcC--C----CCCCceEE
Confidence            5789999999999999999999999999987543221  11 123455554332222  333321  1    13478899


Q ss_pred             EEEeCCHHHHH---HHHHHcCCeeecCCeecCCCceEEEEEECCCCCEEEEEeCC
Q 022818           97 AIATEDVYKLV---ENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRG  148 (291)
Q Consensus        97 ~~~v~d~~~~~---~~l~~~G~~~~~~~~~~~~g~~~~~~~~Dp~G~~iel~~~~  148 (291)
                      +|.|+|++++.   ++ +++|+++...|...++|...++||+||+||+|||++..
T Consensus       211 af~v~d~~~~~~~~~~-~~~G~~~~~~p~~~~~g~~~~~~~~DPdG~~iel~~~~  264 (297)
T 1lgt_A          211 MLEVASLDDVGFAFDR-VDADGLITSTLGRHTNDHMVSFYASTPSGVEVEYGWSA  264 (297)
T ss_dssp             EEEBSCHHHHHHHHHH-HHTTTCEEEEEEEESSSCCEEEEEECTTSCEEEEEECC
T ss_pred             EEeCCCHHHHHHHHHH-HhCCCcccccCcccCCCCcEEEEEECCCCcEEEEecCC
Confidence            99999987766   88 99999988877777666555689999999999999864

>4ghg_A Homoprotocatechuate 2,3-dioxygenase; oxygen activation, Fe(II), 2-His-1-carboxylate triad, 4-nitrocatechol, OXY complex, oxidoreductase; HET: P6G PG4 DHY; 1.50A {Brevibacterium fuscum} PDB: 1q0o_A 1q0c_A 2iga_A* 2ig9_A 3ojj_A* 3bza_A* 3ojk_A* 3ojt_A* 3ojn_A* 4ghh_A* 4ghc_A 4ghd_A* 4ghe_A* 4ghf_A* 3eck_A* 3ecj_A*

Probab=99.55  E-value=4.3e-14  Score=122.02  Aligned_cols=117  Identities=21%  Similarity=0.156  Sum_probs=82.2

Q ss_pred             CCceEEEeeeCChhhhHHHHHHhcCCeeeeeeccCCccceEEEeccccCCceeEEEEeeecCcceeecCcceeEEEEEec
Q 022818          152 EPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTD  231 (291)
Q Consensus       152 ~~~~~v~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~hi~~~v~  231 (291)
                      .+|.||.|.|+|++++.+||+++|||+++.+.+      ..+++....+.....+.+..       ...+++.|++|.|.
T Consensus        16 ~rl~hV~l~V~DLe~s~~FY~dvLGL~~~~~~~------~~~~lr~~~~~~~~~l~l~~-------~~~~gl~~~a~~v~   82 (365)
T 4ghg_A           16 LRCAYAELVVTDLAKSRNFYVDVLGLHVSYEDE------NQIYLRSFEEFIHHNLVLTK-------GPVAALKAMAFRVR   82 (365)
T ss_dssp             EEEEEEEEEESCHHHHHHHHTTTTCCEEEEECS------SEEEEECTTCCSSCSEEEEE-------CSSCEEEEEEEEES
T ss_pred             CEEEEEEEEeCCHHHHHHHHhhCCCCEEEEEcC------CEEEEEeCCCCcceEEEecc-------CCCCCcceEEEEeC
Confidence            468999999999999999999999999876532      12334333332333444432       12357899999998


Q ss_pred             chHHhHHHHHHHHHHhCCeeecCCccCCCCCceEEEEECCCCceEEEeech
Q 022818          232 DVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNE  282 (291)
Q Consensus       232 di~~~~~~l~~~~~~~G~~~~~~~~~~~~~~~~~~~~~DpdG~~iel~~~~  282 (291)
                      + .+.++++.++|+++|+.+...+.....+.++.++|+|||||.|||+...
T Consensus        83 s-~~dLd~~~~~L~~~Gv~v~~~~~~~~~~~g~~~~f~DPdG~~iEl~~~~  132 (365)
T 4ghg_A           83 T-PEDVDKAEAYYQELGCRTERRKDGFVKGIGDALRVEDPLGFPYEFFFET  132 (365)
T ss_dssp             S-HHHHHHHHHHHHHTTCCEEEETTCSSTTBCSEEEEECTTSCEEEEECCB
T ss_pred             C-HHHHHHHHHHHHHcCCcceeccccccCCCceEEEEECCCCCEEEEEEEe
Confidence            7 3334444444499999987766543333458899999999999998653

>1xy7_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G48480, reductively methylated protein, CATH 3.10.180 fold; 1.80A {Arabidopsis thaliana} SCOP: d.32.1.9 PDB: 2q48_A

Probab=99.55  E-value=5.3e-14  Score=108.07  Aligned_cols=119  Identities=14%  Similarity=0.108  Sum_probs=78.3

Q ss_pred             ceEEEeeeCC--hhhhHHHHHHhcCCeeeeeec-------cCCccceEEEeccccCCceeEEEEeeecCcc--eeecC-c
Q 022818          154 LCQVMLRVGD--LGRSIKFYEKALGMKLLRTVD-------KPEYKYTLAMLGYAEEDQTTVLELTYNYGVT--EYTKG-N  221 (291)
Q Consensus       154 ~~~v~l~v~d--~~~~~~fy~~~lG~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~--~~~~~-~  221 (291)
                      -.+..|.|+|  ++++++||+++|||++.....       .+++......+..+    +..+.+....+..  +...+ .
T Consensus        25 ~i~~~L~v~D~~~~~A~~FY~~vfG~~~~~~~~~~~~~~~~~~~~~~~a~l~~~----g~~l~l~~~~~~~~~~~~~~~~  100 (166)
T 1xy7_A           25 EFKQMLLVEAQKVGDAVTFYKSAFGAIESGHSLYPKRKLDQELPHVLSSELNLA----GSSFVVCDVSSLPGFSTAKSEG  100 (166)
T ss_dssp             EEEEEEEECTTCHHHHHHHHHHHHCCEEC---------------CCCEEEEEET----TEEEEEEEGGGSTTCCCCCTTS
T ss_pred             eEEEEEEECCcCHHHHHHHHHHHhCCEEEEEEccCCCCCCCCCCcEEEEEEEEC----CeEEEEeCCCcccCCccccCCC
Confidence            4577899999  999999999999999875431       11122222223321    2233333211110  01110 2


Q ss_pred             ceeEEEEEecchHHhHHHHHHHHHHhCCeeecCCccC--CCCCceEEEEECCCCceEEEeechh
Q 022818          222 AYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSI--PGLNTKITSFVDPDGWKTVLVDNED  283 (291)
Q Consensus       222 ~~~hi~~~v~di~~~~~~l~~~~~~~G~~~~~~~~~~--~~~~~~~~~~~DpdG~~iel~~~~~  283 (291)
                      ...|++|.|+|+++++++|    +++|++ ..+|...  ++  +++++|+||+||.|+|++...
T Consensus       101 ~g~~l~~~vdDvda~~~~l----~~~G~~-~~~~~~~~~~~--~r~~~v~DP~G~~~~l~~~~~  157 (166)
T 1xy7_A          101 SGVTFLLGTKDAEAAVAKA----VDAGAV-KVEVTEAEVEL--GFKGKVTDPFGVTWIFAEKKT  157 (166)
T ss_dssp             CCCEEEEECSCHHHHHHHH----HHTTCE-ECCCCHHHHHT--TEEEEEECTTSCEEEEEC---
T ss_pred             CcEEEEEEcCCHHHHHHHH----HHCCCE-ECCcccccCcc--cEEEEEECCCCCEEEEEeecC
Confidence            2358999999999999999    999999 8888877  76  589999999999999998754

>2ehz_A 1,2-dihydroxynaphthalene dioxygenase; extradiol dioxygenase, protein substrate complex, oxidoreduc; 1.35A {Pseudomonas SP} PDB: 2ei0_A* 2ei1_A* 2ei3_A* 2ei2_A

Probab=99.54  E-value=6.2e-14  Score=118.30  Aligned_cols=120  Identities=13%  Similarity=0.217  Sum_probs=84.8

Q ss_pred             cceeeEEEEEEeCCHHHHHHHHHhhcCCEEEEEeecC--CC-ceeEEEEecCCCCcceEEEeeecCCCCcccCCCCceEE
Q 022818           20 DKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVP--EE-KYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHF   96 (291)
Q Consensus        20 ~~~~i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~--~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~~~~i   96 (291)
                      ..++|+|+.|.|+|++++.+|| ++|||++......+  ++ .....++..++..  ..+.+....      ...+.+|+
T Consensus       146 ~~~~l~hv~l~v~D~~~a~~FY-~~lG~~~~~~~~~~~~~g~~~~~~~~~~~~~~--~~~~~~~~~------~~~~~~hi  216 (302)
T 2ehz_A          146 GDQGLGHCIVRQTDVAEAHKFY-SLLGFRGDVEYRIPLPNGMTAELSFMHCNARD--HSIAFGAMP------AAKRLNHL  216 (302)
T ss_dssp             GGGCSCEEEECCSCHHHHHHHH-HHTTCBCCEEEEEECTTSCEEEEEEEBSSSBS--CSEEECSCC------CSSSEEEE
T ss_pred             CCCccceEEEEcCCHHHHHHHH-HhcCCeeeeEEeccCCCCcceEEEEEEeCCCC--cEEEEecCC------CCCceeEE
Confidence            4679999999999999999999 99999986432211  22 2234555543321  112222111      12467899


Q ss_pred             EEEeCCHHH---HHHHHHHcCCeeecCCeecCCCceEEEEEECCCCCEEEEEeCC
Q 022818           97 AIATEDVYK---LVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRG  148 (291)
Q Consensus        97 ~~~v~d~~~---~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~Dp~G~~iel~~~~  148 (291)
                      +|.|+|+++   ++++|+++|+++...|.....+...++||+||+||+||++...
T Consensus       217 af~v~d~~~v~~~~~~l~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iEl~~~~  271 (302)
T 2ehz_A          217 MLEYTHMEDLGYTHQQFVKNEIDIALQLGIHANDKALTFYGATPSGWLIEPGWRG  271 (302)
T ss_dssp             EEEESSHHHHHHHHHHHHHTTCCEEEEEEECTTTCCEEEEEECTTSSEEEEEECC
T ss_pred             EEEcCCHHHHHHHHHHHHHCCCcEEeCCcccCCCCceEEEEECCCCcEEEEEECc
Confidence            999998664   6789999999988777666555555689999999999999763

>1zsw_A Metallo protein, glyoxalase family protein; hypothetical protein from glyoxalase family, structural GENO PSI, protein structure initiative; 1.65A {Bacillus cereus} SCOP: d.32.1.10 d.32.1.10

Probab=99.54  E-value=9.2e-14  Score=119.15  Aligned_cols=126  Identities=15%  Similarity=0.176  Sum_probs=85.8

Q ss_pred             CCCceEEEeeeCChhhhHHHHHHhcCCeeeeeeccC-CccceEEEeccccCCceeEEEEeeecCcce-eecCcceeEEEE
Q 022818          151 PEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKP-EYKYTLAMLGYAEEDQTTVLELTYNYGVTE-YTKGNAYAQVAI  228 (291)
Q Consensus       151 ~~~~~~v~l~v~d~~~~~~fy~~~lG~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~-~~~~~~~~hi~~  228 (291)
                      ..++.|+.|.|+|++++++||+++|||++....... +.......+..+.+.....+.+........ .....+..|++|
T Consensus        28 i~~i~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~l~l~~~~~~~~~~~~~~~~~hiaf  107 (338)
T 1zsw_A           28 IKGHHHISMVTKNANENNHFYKNVLGLRRVKMTVNQDDPSMYHLFYGDKTGSPGTELSFFEIPLVGRTYRGTNAITRIGL  107 (338)
T ss_dssp             CCSEEEEEEEESCHHHHHHHHHTTTCCEEEEEEEETTEEEEEEEEEESTTCCTTSEEEEEECTTCCBCBCCBSEEEEEEE
T ss_pred             CccccEEEEEcCCHHHHHHHHHHhcCCEEEEeecccCCCceEEEEEcCCCCCCCCEEEEEECCCCccCcCCCCCeeeEEE
Confidence            467999999999999999999999999987654211 111122223322111234455433222111 112347889999


Q ss_pred             Eec---chHHhHHHHHHHHHHhCCeeecCCccCCCCCceEEEEECCCCceEEEeechh
Q 022818          229 STD---DVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNED  283 (291)
Q Consensus       229 ~v~---di~~~~~~l~~~~~~~G~~~~~~~~~~~~~~~~~~~~~DpdG~~iel~~~~~  283 (291)
                      .|+   |+++++++|    +++|+++..++. . + +.+.+||+|||||.|||++...
T Consensus       108 ~v~~~~dld~~~~~l----~~~G~~~~~~~~-~-~-G~~~~~f~DPdG~~iel~~~~~  158 (338)
T 1zsw_A          108 LVPSEDSLHYWKERF----EKFDVKHSEMTT-Y-A-NRPALQFEDAEGLRLVLLVSNG  158 (338)
T ss_dssp             EESCHHHHHHHHHHH----HHTTCEECCSEE-E-T-TEEEEEEECTTCCEEEEEECTT
T ss_pred             EcCCHHHHHHHHHHH----HHCCCccccccc-c-C-CcEEEEEECCCCCEEEEEEcCC
Confidence            998   677888888    999999876554 2 2 3488999999999999998764

>1u6l_A Hypothetical protein; structural genomics, PSI, protein STRU initiative, NEW YORK SGX research center for structural GEN nysgxrc; 2.81A {Pseudomonas aeruginosa} SCOP: d.32.1.7

Probab=99.51  E-value=1.8e-12  Score=97.62  Aligned_cols=123  Identities=15%  Similarity=0.170  Sum_probs=82.7

Q ss_pred             eeeEEEEEEeC-CHHHHHHHHHhhcCCEEEEEeecCC------------CceeEEEEecCCCCcceEEEeeecCCCCccc
Q 022818           22 RRFLHAVYRVG-DLDRTIKFYTECFGMKLLRKRDVPE------------EKYSNAFLGFGPEQSHFVVELTYNYGVTSYD   88 (291)
Q Consensus        22 ~~i~hv~l~v~-d~~~~~~FY~~~lG~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~   88 (291)
                      +++ +..|.|. |+++|++||+++||+++.......+            +....+.+..++.  .+.+  ..........
T Consensus         3 m~~-~p~L~v~~d~~~A~~FY~~vfG~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~l~~~~~--~l~~--~d~~~~~~~~   77 (149)
T 1u6l_A            3 LQI-VPYLIFNGNCREAFSCYHQHLGGTLEAMLPFGDSPECGDIPADWKDKIMHARLVVGSF--ALMA--SDNHPAYPYE   77 (149)
T ss_dssp             CEE-EEEEEESSCHHHHHHHHHHHHCSEEEEEEESTTTTC----CCSSCCCEEEEEEEETTE--EEEE--EECCTTSCCC
T ss_pred             ceE-EEEEEECCCHHHHHHHHHHHhCCEEEEEEEcccCCcccCCCcccCCcEEEEEEEECCE--EEEE--EcCCCccCCC
Confidence            454 4888998 9999999999999999876532211            2233344554432  2222  2211110111


Q ss_pred             CCCCceEEEEEeCC---HHHHHHHHHHcCCeeecCCeecCCCceEEEEEECCCCCEEEEEeCCCCCC
Q 022818           89 IGTGFGHFAIATED---VYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRGPTPE  152 (291)
Q Consensus        89 ~g~~~~~i~~~v~d---~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~Dp~G~~iel~~~~~~~~  152 (291)
                      ...+ .+++|.|+|   +++++++|+ .|.++..+|.+.+||.+ +.+|+||+|+.|+|.+.....+
T Consensus        78 ~~~g-~~l~~~v~d~~evd~~~~~l~-~Gg~i~~p~~~~~wG~r-~~~v~Dp~G~~w~l~~~~~~~~  141 (149)
T 1u6l_A           78 GIKG-CSISLNVDSKAEAERLFNALA-EGGSVQMPLGPTFWAAS-FGMFTDRFGVAWMVNCEQDREG  141 (149)
T ss_dssp             CCCS-EEEEEECSSHHHHHHHHHHHH-TTSEEEEEEEEETTEEE-EEEEECTTSCEEEEEESCC---
T ss_pred             CCCc-eEEEEEcCCHHHHHHHHHHHH-CCCEEeecccccCcccc-eEEEECCCCCEEEEEEecccCC
Confidence            1223 589999998   789999985 89999999999999765 4889999999999998765543

>2zw5_A Bleomycin acetyltransferase; dimer, two domains; HET: COA; 2.40A {Streptomyces verticillus} PDB: 2zw4_A* 2zw6_A 2zw7_A*

Probab=99.49  E-value=1.4e-12  Score=109.68  Aligned_cols=169  Identities=12%  Similarity=0.098  Sum_probs=103.3

Q ss_pred             CceEEEEEeCC-HHHHHHHHHHcCCeeecCCeec--CCCceEEEEEECCCCCEEEEEeCC---CCCCCceEEEeeeCChh
Q 022818           92 GFGHFAIATED-VYKLVENIRAKGGNVTREPGPL--KGGTTHIAFVKDPDGYIFELIQRG---PTPEPLCQVMLRVGDLG  165 (291)
Q Consensus        92 ~~~~i~~~v~d-~~~~~~~l~~~G~~~~~~~~~~--~~g~~~~~~~~Dp~G~~iel~~~~---~~~~~~~~v~l~v~d~~  165 (291)
                      ++..+.+.|.. =.++..-+++.|++........  ..|..         -..+.+....   ..+....++.+.|.|++
T Consensus       125 g~~~i~~~v~~~N~~s~~ly~k~GF~~~g~~~~~~~~~g~d---------~~~~~l~~~~~~~~~~~~~~~~~l~v~D~~  195 (301)
T 2zw5_A          125 GLDRVEAWIEAGNRRSLAVAARVGLTERARLAQHYPHRPGP---------HEMVVLGKARAEEPLTTLAVITELPVRDVA  195 (301)
T ss_dssp             CCSEEEEEEESSCHHHHHHHHHTTCEEEEEEEECCTTSSSC---------EEEEEEEEESSCCSCEEEEEEEEEEESCHH
T ss_pred             CccEEEEEeCCCCHHHHHHHHHcCCcCcceehhhcccCCCC---------eEEEEEeHHHhhhhcccceeEEEEEeCCHH
Confidence            56667666632 2344566678888755431111  11111         1122222221   11223457789999999


Q ss_pred             hhHHHHHHhcCCeeeeeeccCCccceEEEeccccCCceeEEEEeeecCcceeecCcceeEEEEEec-chHHhHHHHHHHH
Q 022818          166 RSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTD-DVYKSAEVVNLVT  244 (291)
Q Consensus       166 ~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~hi~~~v~-di~~~~~~l~~~~  244 (291)
                      ++.+||+++|||++......+ +.+.  .+..+.......+.+.....    ..+....+++|.|+ |++++++++    
T Consensus       196 ~a~~FY~~~lG~~~~~~~~~~-~~~~--~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~v~~dvd~~~~~~----  264 (301)
T 2zw5_A          196 ATLRLVEAALGARTAFAIGDP-PEFA--EAALTPWSAGPRFRLAAVPG----PGPVEPVRLHLDAAGTADSLHRRA----  264 (301)
T ss_dssp             HHHHHHHHHSCCEEEEEEETT-EEEE--EEESSSSSSSSEEEEEECCC----SSCCCCCEEEEEEESCHHHHHHHH----
T ss_pred             HHHHHHHHhcCCeEeeecCCC-ccEE--EEEcCCCccccccccccCCC----cCCCCceEEEEEcCccHHHHHHHH----
Confidence            999999999999987443322 2232  33322211011222211110    11223468999999 999999999    


Q ss_pred             HHhCCeeecCCccCCCCCceEEEEECCCCceEEEeec
Q 022818          245 QELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDN  281 (291)
Q Consensus       245 ~~~G~~~~~~~~~~~~~~~~~~~~~DpdG~~iel~~~  281 (291)
                      +++|+++..+|...++ |.+.++|+|||||.|||.+.
T Consensus       265 ~~~G~~~~~~~~~~~~-g~~~~~~~DPdG~~~~~~~~  300 (301)
T 2zw5_A          265 VDAGARVDGPPVRRPW-GRSEFVITLPEGHELTVSAP  300 (301)
T ss_dssp             HHTTCCEEEEEEECTT-SCEEEEEECTTSCEEEEEEC
T ss_pred             HHcCCccccCcccCCC-cceEEEEECCCCCEEEeeCC
Confidence            9999999988888776 45899999999999999875

>3pkv_A Toxoflavin lyase (TFLA); metalloenzyme, vicinal oxygen chelate superfamily; 1.34A {Paenibacillus polymyxa} PDB: 3pkw_A 3pkx_A* 3oul_A 3oum_A*

Probab=99.48  E-value=3.9e-13  Score=109.96  Aligned_cols=114  Identities=15%  Similarity=0.256  Sum_probs=80.1

Q ss_pred             CCCCceEEEeeeCChhhhHHHHHHhcCCeeeeeeccCCccceEEEeccccCCceeEEEEeeecCcceeecCcceeEEEEE
Q 022818          150 TPEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAIS  229 (291)
Q Consensus       150 ~~~~~~~v~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~hi~~~  229 (291)
                      ...++.||.|.|+|++++.+||+++|||++....+      ..+.+..+    ...+.+.....     .+.+..|++|.
T Consensus        23 ~~~~l~hV~L~V~Dle~s~~FY~~vLGl~~~~~~~------~~~~L~~g----~~~l~l~~~~~-----~~~~~~hiaf~   87 (252)
T 3pkv_A           23 HMTSIKQLTLYTAELDRMLAFYTNMLGAQHVHEQA------DAFTIQLG----VSQIQFRAAAD-----GTKPFYHIAIN   87 (252)
T ss_dssp             --CCEEEEEEEESCHHHHHHHHHHHHCGGGEEECS------SEEEEEET----TEEEEEEECCT-----TCCCCCEEEEE
T ss_pred             cCceEEEEEEEeCCHHHHHHHHHHhcCCEEEEccC------CEEEEEeC----CEEEEEEECCC-----CCCCeeEEEEE
Confidence            34689999999999999999999999999876532      12334432    24455543221     23467899999


Q ss_pred             ecc--hHHhHHHHHHHHHHhCCeeecC-Ccc---CCCCCceEEEEECCCCceEEEeechh
Q 022818          230 TDD--VYKSAEVVNLVTQELGGKITRQ-PGS---IPGLNTKITSFVDPDGWKTVLVDNED  283 (291)
Q Consensus       230 v~d--i~~~~~~l~~~~~~~G~~~~~~-~~~---~~~~~~~~~~~~DpdG~~iel~~~~~  283 (291)
                      |++  +++++++|    +++ +++..+ +..   ...++.+.+||+|||||.|||++...
T Consensus        88 V~~~dld~~~~rL----~~~-v~~~~~~~~~~~~~~~~g~~~~~f~DPdGn~iEl~~~~~  142 (252)
T 3pkv_A           88 IAANHFQEGKAWL----SGF-GELLTENDEDQAYFPFFNAYSCYVEDPSGNIIELISRQQ  142 (252)
T ss_dssp             ECTTCHHHHHHHH----TTS-SCCCCBTTBSCEEETTTTEEEEEEECTTCCEEEEEEESS
T ss_pred             ecHHHHHHHHHHH----Hhc-ceEeccCCccccccccCCeEEEEEECCCCCEEEEEEeCC
Confidence            864  66677777    889 887652 221   12335689999999999999998754

>1xy7_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G48480, reductively methylated protein, CATH 3.10.180 fold; 1.80A {Arabidopsis thaliana} SCOP: d.32.1.9 PDB: 2q48_A

Probab=99.48  E-value=1e-12  Score=100.79  Aligned_cols=119  Identities=16%  Similarity=0.111  Sum_probs=78.6

Q ss_pred             eeEEEEEEeCC--HHHHHHHHHhhcCCEEEEEee-------cCCCceeEEEEecCCCCcceEEEeeecCCC-C-cccCC-
Q 022818           23 RFLHAVYRVGD--LDRTIKFYTECFGMKLLRKRD-------VPEEKYSNAFLGFGPEQSHFVVELTYNYGV-T-SYDIG-   90 (291)
Q Consensus        23 ~i~hv~l~v~d--~~~~~~FY~~~lG~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~-~~~~g-   90 (291)
                      .-.+..|.|+|  +++|++||+++|||++.....       .+.+.+....+..++.  .+.  +...... . +...+ 
T Consensus        24 ~~i~~~L~v~D~~~~~A~~FY~~vfG~~~~~~~~~~~~~~~~~~~~~~~a~l~~~g~--~l~--l~~~~~~~~~~~~~~~   99 (166)
T 1xy7_A           24 TEFKQMLLVEAQKVGDAVTFYKSAFGAIESGHSLYPKRKLDQELPHVLSSELNLAGS--SFV--VCDVSSLPGFSTAKSE   99 (166)
T ss_dssp             EEEEEEEEECTTCHHHHHHHHHHHHCCEEC---------------CCCEEEEEETTE--EEE--EEEGGGSTTCCCCCTT
T ss_pred             ceEEEEEEECCcCHHHHHHHHHHHhCCEEEEEEccCCCCCCCCCCcEEEEEEEECCe--EEE--EeCCCcccCCccccCC
Confidence            34688999999  999999999999999875431       1112223334444332  222  2221110 0 11110 


Q ss_pred             CCceEEEEEeCCHHHHHHHHHHcCCeeecCCeec--CCCceEEEEEECCCCCEEEEEeCC
Q 022818           91 TGFGHFAIATEDVYKLVENIRAKGGNVTREPGPL--KGGTTHIAFVKDPDGYIFELIQRG  148 (291)
Q Consensus        91 ~~~~~i~~~v~d~~~~~~~l~~~G~~~~~~~~~~--~~g~~~~~~~~Dp~G~~iel~~~~  148 (291)
                      ....+++|.|+|+++++++|+++|++ ..+|...  +| .+ +++|+||+||.|+|++..
T Consensus       100 ~~g~~l~~~vdDvda~~~~l~~~G~~-~~~~~~~~~~~-~r-~~~v~DP~G~~~~l~~~~  156 (166)
T 1xy7_A          100 GSGVTFLLGTKDAEAAVAKAVDAGAV-KVEVTEAEVEL-GF-KGKVTDPFGVTWIFAEKK  156 (166)
T ss_dssp             SCCCEEEEECSCHHHHHHHHHHTTCE-ECCCCHHHHHT-TE-EEEEECTTSCEEEEEC--
T ss_pred             CCcEEEEEEcCCHHHHHHHHHHCCCE-ECCcccccCcc-cE-EEEEECCCCCEEEEEeec
Confidence            22348999999999999999999999 8888887  77 44 589999999999999865

>1u6l_A Hypothetical protein; structural genomics, PSI, protein STRU initiative, NEW YORK SGX research center for structural GEN nysgxrc; 2.81A {Pseudomonas aeruginosa} SCOP: d.32.1.7

Probab=99.48  E-value=1.1e-12  Score=98.91  Aligned_cols=117  Identities=16%  Similarity=0.127  Sum_probs=78.1

Q ss_pred             EEEeeeC-ChhhhHHHHHHhcCCeeeeeeccCC------------ccceEEEeccccCCceeEEEEeeecCcceeecCcc
Q 022818          156 QVMLRVG-DLGRSIKFYEKALGMKLLRTVDKPE------------YKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNA  222 (291)
Q Consensus       156 ~v~l~v~-d~~~~~~fy~~~lG~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~  222 (291)
                      ...|.|. |+++|++||+++||+++.......+            +......+..+    ...+.+....+....+...+
T Consensus         6 ~p~L~v~~d~~~A~~FY~~vfG~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~l~~~----~~~l~~~d~~~~~~~~~~~g   81 (149)
T 1u6l_A            6 VPYLIFNGNCREAFSCYHQHLGGTLEAMLPFGDSPECGDIPADWKDKIMHARLVVG----SFALMASDNHPAYPYEGIKG   81 (149)
T ss_dssp             EEEEEESSCHHHHHHHHHHHHCSEEEEEEESTTTTC----CCSSCCCEEEEEEEET----TEEEEEEECCTTSCCCCCCS
T ss_pred             EEEEEECCCHHHHHHHHHHHhCCEEEEEEEcccCCcccCCCcccCCcEEEEEEEEC----CEEEEEEcCCCccCCCCCCc
Confidence            4678888 9999999999999999875432111            11222223321    12333322211101112223


Q ss_pred             eeEEEEEecc---hHHhHHHHHHHHHHhCCeeecCCccCCCCCceEEEEECCCCceEEEeechh
Q 022818          223 YAQVAISTDD---VYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNED  283 (291)
Q Consensus       223 ~~hi~~~v~d---i~~~~~~l~~~~~~~G~~~~~~~~~~~~~~~~~~~~~DpdG~~iel~~~~~  283 (291)
                       .+++|.|+|   +++++++|    + +|++++.+|...++ |.++++|+||+|+.|+|++...
T Consensus        82 -~~l~~~v~d~~evd~~~~~l----~-~Gg~i~~p~~~~~w-G~r~~~v~Dp~G~~w~l~~~~~  138 (149)
T 1u6l_A           82 -CSISLNVDSKAEAERLFNAL----A-EGGSVQMPLGPTFW-AASFGMFTDRFGVAWMVNCEQD  138 (149)
T ss_dssp             -EEEEEECSSHHHHHHHHHHH----H-TTSEEEEEEEEETT-EEEEEEEECTTSCEEEEEESCC
T ss_pred             -eEEEEEcCCHHHHHHHHHHH----H-CCCEEeecccccCc-ccceEEEECCCCCEEEEEEecc
Confidence             689999998   66777777    6 79999999999887 4689999999999999998543

>1u7i_A Hypothetical protein; structural genomics, PA1358, PSI, PROT structure initiative; HET: MSE; 1.40A {Pseudomonas aeruginosa} SCOP: d.32.1.7

Probab=99.46  E-value=3.9e-12  Score=94.23  Aligned_cols=119  Identities=17%  Similarity=0.239  Sum_probs=82.4

Q ss_pred             ceeeEEEEEEeC--CHHHHHHHHHhhc-CCEEEEEeecCC------CceeEEEEecCCCCcceEEEeeecCCCCcccCCC
Q 022818           21 KRRFLHAVYRVG--DLDRTIKFYTECF-GMKLLRKRDVPE------EKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGT   91 (291)
Q Consensus        21 ~~~i~hv~l~v~--d~~~~~~FY~~~l-G~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~   91 (291)
                      ++++. ..|.++  |+++|++||+++| |+++.......+      +......+..++.  .+.+. ...... .... .
T Consensus         4 m~~i~-~~L~v~~~d~~~A~~FY~~~f~G~~~~~~~~~~~~~~~~~~~~~~a~~~~~g~--~~~~~-~~~~~~-~~~~-~   77 (136)
T 1u7i_A            4 SARVR-PFLMFQGVQAEAAMNFYLSLFDDAEILQIQRYGAEGPGPEGSVLKALFRLGDQ--SVHCI-DSHVRH-AFDF-T   77 (136)
T ss_dssp             CCEEE-EEEEEESSCHHHHHHHHHHHCSSEEEEEEEECCTTCSSCTTSEEEEEEEETTE--EEEEE-EESSCC-SCCC-C
T ss_pred             cccce-EEEEECCCCHHHHHHHHHHHcCCCEeeEEEEcccCCCCCCCcEEEEEEEECCE--EEEEE-CCCCCC-CCCC-C
Confidence            34555 668887  9999999999999 999875322211      2333444555432  22221 111011 1111 2


Q ss_pred             CceEEEEEeCC---HHHHHHHHHHcCCeeecCCeecCCCceEEEEEECCCCCEEEEEeC
Q 022818           92 GFGHFAIATED---VYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQR  147 (291)
Q Consensus        92 ~~~~i~~~v~d---~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~Dp~G~~iel~~~  147 (291)
                      ....++|.|+|   +++++++|+ +|.++..+|.+.+||.+. .+++||+|+.|+|...
T Consensus        78 ~~~~l~~~v~d~~evd~~~~~l~-~Gg~v~~p~~~~~~G~~~-~~~~Dp~G~~w~l~~~  134 (136)
T 1u7i_A           78 PAFSFFVDCESNAQIERLAEALS-DGGKALMPLGDYGFSQRF-AWLADRFGVSWQLNLA  134 (136)
T ss_dssp             TTEEEEEECCCHHHHHHHHHHHH-TTSEEEEEEECCSSSSEE-EEEECTTSCEEEEEEC
T ss_pred             CceEEEEEcCCHHHHHHHHHHHH-cCCEEecccccCCCcceE-EEEECCCCCEEEEEec
Confidence            33578999999   999999999 999999999999998764 8899999999999874

>1u7i_A Hypothetical protein; structural genomics, PA1358, PSI, PROT structure initiative; HET: MSE; 1.40A {Pseudomonas aeruginosa} SCOP: d.32.1.7

Probab=99.45  E-value=1.9e-12  Score=95.91  Aligned_cols=114  Identities=13%  Similarity=0.086  Sum_probs=77.6

Q ss_pred             EEeeeC--ChhhhHHHHHHhc-CCeeeeeeccC------CccceEEEeccccCCceeEEEEeeecCcceeecCcceeEEE
Q 022818          157 VMLRVG--DLGRSIKFYEKAL-GMKLLRTVDKP------EYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVA  227 (291)
Q Consensus       157 v~l~v~--d~~~~~~fy~~~l-G~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~hi~  227 (291)
                      ..|.+.  |++++++||+++| |+++.......      ++......+..++    ..+.+.......... ......++
T Consensus         9 ~~L~v~~~d~~~A~~FY~~~f~G~~~~~~~~~~~~~~~~~~~~~~a~~~~~g----~~~~~~~~~~~~~~~-~~~~~~l~   83 (136)
T 1u7i_A            9 PFLMFQGVQAEAAMNFYLSLFDDAEILQIQRYGAEGPGPEGSVLKALFRLGD----QSVHCIDSHVRHAFD-FTPAFSFF   83 (136)
T ss_dssp             EEEEEESSCHHHHHHHHHHHCSSEEEEEEEECCTTCSSCTTSEEEEEEEETT----EEEEEEEESSCCSCC-CCTTEEEE
T ss_pred             EEEEECCCCHHHHHHHHHHHcCCCEeeEEEEcccCCCCCCCcEEEEEEEECC----EEEEEECCCCCCCCC-CCCceEEE
Confidence            568886  9999999999999 99987532211      1222222233211    222222211001111 12336899


Q ss_pred             EEecc---hHHhHHHHHHHHHHhCCeeecCCccCCCCCceEEEEECCCCceEEEeec
Q 022818          228 ISTDD---VYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDN  281 (291)
Q Consensus       228 ~~v~d---i~~~~~~l~~~~~~~G~~~~~~~~~~~~~~~~~~~~~DpdG~~iel~~~  281 (291)
                      |.|+|   +++++++|    + +|+++..+|...++ +.++++|+||+|+.|+|...
T Consensus        84 ~~v~d~~evd~~~~~l----~-~Gg~v~~p~~~~~~-G~~~~~~~Dp~G~~w~l~~~  134 (136)
T 1u7i_A           84 VDCESNAQIERLAEAL----S-DGGKALMPLGDYGF-SQRFAWLADRFGVSWQLNLA  134 (136)
T ss_dssp             EECCCHHHHHHHHHHH----H-TTSEEEEEEECCSS-SSEEEEEECTTSCEEEEEEC
T ss_pred             EEcCCHHHHHHHHHHH----H-cCCEEecccccCCC-cceEEEEECCCCCEEEEEec
Confidence            99999   88888888    9 99999999999988 46899999999999999874

>2zw5_A Bleomycin acetyltransferase; dimer, two domains; HET: COA; 2.40A {Streptomyces verticillus} PDB: 2zw4_A* 2zw6_A 2zw7_A*

Probab=99.42  E-value=1.1e-11  Score=104.08  Aligned_cols=119  Identities=13%  Similarity=0.071  Sum_probs=83.4

Q ss_pred             ceeeEEEEEEeCCHHHHHHHHHhhcCCEEEEEeecCCCceeEEEEecCCCCcceEEEeeecCCCCcccCCCCceEEEEEe
Q 022818           21 KRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIAT  100 (291)
Q Consensus        21 ~~~i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~~~~i~~~v  100 (291)
                      .....++.+.|+|++++.+||+++||+++......+ +  ....+..++......+.+.....    ..+....+++|.|
T Consensus       181 ~~~~~~~~l~v~D~~~a~~FY~~~lG~~~~~~~~~~-~--~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~v  253 (301)
T 2zw5_A          181 TTLAVITELPVRDVAATLRLVEAALGARTAFAIGDP-P--EFAEAALTPWSAGPRFRLAAVPG----PGPVEPVRLHLDA  253 (301)
T ss_dssp             EEEEEEEEEEESCHHHHHHHHHHHSCCEEEEEEETT-E--EEEEEESSSSSSSSEEEEEECCC----SSCCCCCEEEEEE
T ss_pred             ccceeEEEEEeCCHHHHHHHHHHhcCCeEeeecCCC-c--cEEEEEcCCCccccccccccCCC----cCCCCceEEEEEc
Confidence            344568899999999999999999999987543322 2  22345444311001111111110    1122345789999


Q ss_pred             C-CHHHHHHHHHHcCCeeecCCeecCCCceEEEEEECCCCCEEEEEeC
Q 022818          101 E-DVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQR  147 (291)
Q Consensus       101 ~-d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~Dp~G~~iel~~~  147 (291)
                      + |+++++++++++|+++..+|...++|... ++|+||+||.|+|.+.
T Consensus       254 ~~dvd~~~~~~~~~G~~~~~~~~~~~~g~~~-~~~~DPdG~~~~~~~~  300 (301)
T 2zw5_A          254 AGTADSLHRRAVDAGARVDGPPVRRPWGRSE-FVITLPEGHELTVSAP  300 (301)
T ss_dssp             ESCHHHHHHHHHHTTCCEEEEEEECTTSCEE-EEEECTTSCEEEEEEC
T ss_pred             CccHHHHHHHHHHcCCccccCcccCCCcceE-EEEECCCCCEEEeeCC
Confidence            8 99999999999999998888888887654 8999999999999874

>2r5v_A PCZA361.1; dioxygenase, non-heme iron, vancomycin, oxidoreductase; HET: HHH; 2.30A {Amycolatopsis orientalis}

Probab=99.37  E-value=6.1e-12  Score=108.57  Aligned_cols=122  Identities=17%  Similarity=0.155  Sum_probs=89.7

Q ss_pred             CCceEEEeeeCChhhhHHHHHHhcCCeeeeeeccCCccceEEEeccccCCceeEEEEeeecCcce------eecCcceeE
Q 022818          152 EPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTE------YTKGNAYAQ  225 (291)
Q Consensus       152 ~~~~~v~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~------~~~~~~~~h  225 (291)
                      .++.||.+.|+|++++.+||+++|||+++......++  ....+..+    ...+.+..+..+..      ...++++.|
T Consensus         4 ~~l~hv~~~v~D~~~a~~fy~~~LGf~~~~~~~~~~g--~~~~~~~g----~~~l~l~~~~~~~~~~~~~~~~~g~g~~~   77 (357)
T 2r5v_A            4 FEIDYVEMYVENLEVAAFSWVDKYAFAVAGTSRSADH--RSIALRQG----QVTLVLTEPTSDRHPAAAYLQTHGDGVAD   77 (357)
T ss_dssp             CEEEEEEEECSCHHHHHHHHHHHHCCEEEEEEEETTE--EEEEEEET----TEEEEEEEESSTTSHHHHHHHHHSSEEEE
T ss_pred             ceEEEEEEEECCHHHHHHHHHHcCCCeEEEEEcCCCc--eEEEEEeC----CEEEEEeCCCCCCCHHHHHHHhcCCeEEE
Confidence            5689999999999999999999999998876543333  22333322    34566654322111      124678999


Q ss_pred             EEEEecchHHhHHHHHHHHHHhCCeeecCCccCCCCCceEEEEECCCCceEEEeechh
Q 022818          226 VAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNED  283 (291)
Q Consensus       226 i~~~v~di~~~~~~l~~~~~~~G~~~~~~~~~~~~~~~~~~~~~DpdG~~iel~~~~~  283 (291)
                      ++|.|+|++++++++    +++|+++..+|.....+..+...++||+|..++|+++..
T Consensus        78 iaf~V~D~~~~~~~l----~~~G~~~~~~p~~~~~g~~~~~~~~~p~g~~~~lv~~~~  131 (357)
T 2r5v_A           78 IAMATSDVAAAYEAA----VRAGAEAVRAPGQHSEAAVTTATIGGFGDVVHTLIQRDG  131 (357)
T ss_dssp             EEEEESCHHHHHHHH----HHTTCCEEEEEECCC-CCCCEEEEECSTTCEEEEEECCS
T ss_pred             EEEEECCHHHHHHHH----HHcCCeEeECcEecCCCeEEEEEEeccCCeEEEEEeccc
Confidence            999999999999999    999999987775422222368889999999999998754

>1t47_A 4-hydroxyphenylpyruvate dioxygenase; triketone inhibitor, iron, oxidoreductase; HET: NTD; 2.50A {Streptomyces avermitilis} SCOP: d.32.1.3 d.32.1.3

Probab=99.35  E-value=6.9e-12  Score=109.08  Aligned_cols=126  Identities=17%  Similarity=0.228  Sum_probs=91.5

Q ss_pred             CCCceEEEeeeCChhhhHHHHHHhcCCeeeeeeccCCc--cceEEEeccccCCceeEEEEeeecCcce----------ee
Q 022818          151 PEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEY--KYTLAMLGYAEEDQTTVLELTYNYGVTE----------YT  218 (291)
Q Consensus       151 ~~~~~~v~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~l~~~~~~~~----------~~  218 (291)
                      ..++.||.+.|+|++++.+||+++|||+++...+...+  ......++.+    ...+++.....+..          ..
T Consensus        20 i~~i~hV~i~V~D~~~a~~FY~~~LGf~~~~~~~~~~~~~~~~~~~~~~g----~~~l~l~~~~~~~~~~~~~~~~~~~~   95 (381)
T 1t47_A           20 VKGMDAVVFAVGNAKQAAHYYSTAFGMQLVAYSGPENGSRETASYVLTNG----SARFVLTSVIKPATPWGHFLADHVAE   95 (381)
T ss_dssp             CCEEEEEEEECSCHHHHHHHHHHTSCCEEEEEESGGGTCCSEEEEEEEET----TEEEEEEEESSCCSHHHHHHHHHHHH
T ss_pred             CceEEEEEEEECCHHHHHHHHHHcCCCEEEEEEcCCCCCceEEEEEEecC----CEEEEEecCCCCCCcchhHHHHHHHh
Confidence            46799999999999999999999999998876432111  2234444422    35566665322111          11


Q ss_pred             cCcceeEEEEEecchHHhHHHHHHHHHHhCCeeecCCccCC--CCCceEEEEECCCCceEEEeechhh
Q 022818          219 KGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIP--GLNTKITSFVDPDGWKTVLVDNEDF  284 (291)
Q Consensus       219 ~~~~~~hi~~~v~di~~~~~~l~~~~~~~G~~~~~~~~~~~--~~~~~~~~~~DpdG~~iel~~~~~~  284 (291)
                      .++++.|++|.|+|++++++++    +++|+++..+|....  .+..++..++||+|+.++|+++..+
T Consensus        96 ~g~gv~~iaf~V~D~~~~~~~l----~~~G~~~~~~p~~~~~~~g~~~~~~~~~pgg~~~~lv~~~~~  159 (381)
T 1t47_A           96 HGDGVVDLAIEVPDARAAHAYA----IEHGARSVAEPYELKDEHGTVVLAAIATYGKTRHTLVDRTGY  159 (381)
T ss_dssp             HCSEEEEEEEECSCHHHHHHHH----HHTTCCEEEEEEEEEETTEEEEEEEEECSTTCEEEEEEEEEE
T ss_pred             cCCceEEEEEEECCHHHHHHHH----HHcCCEEeeccccccCCCCeEEEEEEecCCCcEEEEEecCCC
Confidence            3678999999999999999999    999999988776421  1123578899999999999997643

>1tsj_A Conserved hypothetical protein; structural genomics, protein structure initiative, PSI, nysgxrc; 2.60A {Staphylococcus aureus subsp} SCOP: d.32.1.7

Probab=99.33  E-value=5.4e-11  Score=88.17  Aligned_cols=118  Identities=12%  Similarity=0.169  Sum_probs=81.6

Q ss_pred             ceeeEEEEEEeCCHHHHHHHHHhhc-CCEEEEEeecC------CCceeEEEEecCCCCcceEEEeeecCCCCcccCCCCc
Q 022818           21 KRRFLHAVYRVGDLDRTIKFYTECF-GMKLLRKRDVP------EEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGF   93 (291)
Q Consensus        21 ~~~i~hv~l~v~d~~~~~~FY~~~l-G~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~~   93 (291)
                      +++|....+.+.|.++|++||+++| |+++.......      ++....+.+.+++.  .++..  .. .+. .  +.. 
T Consensus         3 ~~~i~p~l~~~~d~~eA~~FY~~~f~G~~~~~~~~~~~~~~~~~~~v~ha~l~~~~~--~~m~~--d~-~~~-~--~~~-   73 (139)
T 1tsj_A            3 IPKITTFLMFNNQAEEAVKLYTSLFEDSEIITMAKYGENGPGDPGTVQHSIFTLNGQ--VFMAI--DA-NSG-T--ELP-   73 (139)
T ss_dssp             CCSEEEEEECSSCHHHHHHHHHHHSSSCEEEEEEECC-----CTTSEEEEEEEETTE--EEEEE--C-----------C-
T ss_pred             CCceeEEEEECCCHHHHHHHHHHHcCCCEEEEEEecCcCCCCCCCcEEEEEEEECCE--EEEEE--CC-CCC-C--Cce-
Confidence            4566666666669999999999999 99987532222      23444555655432  22221  11 111 1  112 


Q ss_pred             eEEEEEeCC---HHHHHHHHHHcCCeeecCCeecCCCceEEEEEECCCCCEEEEEeCCC
Q 022818           94 GHFAIATED---VYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRGP  149 (291)
Q Consensus        94 ~~i~~~v~d---~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~Dp~G~~iel~~~~~  149 (291)
                      ..+++.|+|   +++++++|. .|+++..++.+.+||.+. .+|+||+|+.|+|.....
T Consensus        74 ~sl~~~~~d~~evd~~~~~l~-~G~~v~~p~~~~~wG~~~-g~v~Dp~G~~W~i~~~~~  130 (139)
T 1tsj_A           74 ISLFVTVKDTIEMERLFNGLK-DEGAILMPKTNMPPYREF-AWVQDKFGVSFQLALPEE  130 (139)
T ss_dssp             CCEEEECSSHHHHHHHHHHHH-TTCEEEEEEEEETTEEEE-EEEECTTSCEEEEEECC-
T ss_pred             EEEEEECCCHHHHHHHHHHHh-CCCEEeecccccCCCceE-EEEECCCCCEEEEeeccc
Confidence            568899987   788899998 799999999999998775 899999999999998653

>1sqd_A 4-hydroxyphenylpyruvate dioxygenase; oxidoreductase; 1.80A {Arabidopsis thaliana} SCOP: d.32.1.3 d.32.1.3 PDB: 1tfz_A* 1tg5_A* 1sp9_A

Probab=99.30  E-value=1.3e-11  Score=108.32  Aligned_cols=125  Identities=14%  Similarity=0.099  Sum_probs=91.5

Q ss_pred             CCceEEEeeeCChhhhHHHHHHhcCCeeeeeeccCC--ccceEEEeccccCCceeEEEEeeecCcc--------------
Q 022818          152 EPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPE--YKYTLAMLGYAEEDQTTVLELTYNYGVT--------------  215 (291)
Q Consensus       152 ~~~~~v~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~l~l~~~~~~~--------------  215 (291)
                      .++.||.|.|+|++++++||+++|||+++...+.+.  ..+..+.++.  +  ...+.+.....+.              
T Consensus        24 ~~i~HV~i~V~Dle~a~~FY~~~LGf~~v~~~~~~~g~~~~~~~~l~~--g--~~~l~L~~~~~~~~~~~~~~~~~~~p~   99 (424)
T 1sqd_A           24 KRFHHIEFWCGDATNVARRFSWGLGMRFSAKSDLSTGNMVHASYLLTS--G--DLRFLFTAPYSPSLSAGEIKPTTTASI   99 (424)
T ss_dssp             EEEEEEEEECSCHHHHHHHHHHHHTCEEEEEESGGGTCSSEEEEEEEE--T--TEEEEEEEECCGGGTTTCCGGGCCCSS
T ss_pred             CeEEEEEEEECCHHHHHHHHHHcCCCEEEEEEcCCCCceeEEEEEEcC--C--CEEEEEecCCCCccccccccccccccc
Confidence            368999999999999999999999999877654321  1233344442  1  3566666542221              


Q ss_pred             -----e------eecCcceeEEEEEecchHHhHHHHHHHHHHhCCeeecCCccCCCCCceEEEEECCCCceEEEeechhh
Q 022818          216 -----E------YTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNEDF  284 (291)
Q Consensus       216 -----~------~~~~~~~~hi~~~v~di~~~~~~l~~~~~~~G~~~~~~~~~~~~~~~~~~~~~DpdG~~iel~~~~~~  284 (291)
                           .      ...+++..|++|.|+|++++++++    +++|+++..+|..... ..+...+++|+|+.++|+++...
T Consensus       100 ~~~~~~~~~~~~~~~g~gv~~iAf~VdDvdaa~~~l----~a~Ga~~~~~P~~~~~-~~~~~~i~~~Gg~~~~lvd~~g~  174 (424)
T 1sqd_A          100 PSFDHGSCRSFFSSHGLGVRAVAIEVEDAESAFSIS----VANGAIPSSPPIVLNE-AVTIAEVKLYGDVVLRYVSYKAE  174 (424)
T ss_dssp             TTCCHHHHHHHHHHHCSEEEEEEEEESCHHHHHHHH----HHTTCCEEEEEEEETT-TEEEEEEEEETTEEEEEEEECCC
T ss_pred             ccccchHHHHHHHhcCCeEEEEEEEeCCHHHHHHHH----HHcCCEEeecCcCCCC-ceEEEEEEcCCCcEEEEEecCCC
Confidence                 0      124568999999999999999999    9999999888865433 24678888999999999988654


Q ss_pred             h
Q 022818          285 L  285 (291)
Q Consensus       285 ~  285 (291)
                      .
T Consensus       175 ~  175 (424)
T 1sqd_A          175 D  175 (424)
T ss_dssp             -
T ss_pred             C
Confidence            3

>3isq_A 4-hydroxyphenylpyruvate dioxygenase; tyrosine metabolism, DIS mutation, iron, mental retardation, metal-binding, oxidored phenylalanine catabolism; 1.75A {Homo sapiens} PDB: 1sqi_A*

Probab=99.28  E-value=1.9e-11  Score=105.75  Aligned_cols=126  Identities=17%  Similarity=0.213  Sum_probs=93.5

Q ss_pred             CCceEEEeeeCChhhhHHHHHHhcCCeeeeeeccCCcc--ceEEEeccccCCceeEEEEeeecCcc--e-----eecCcc
Q 022818          152 EPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYK--YTLAMLGYAEEDQTTVLELTYNYGVT--E-----YTKGNA  222 (291)
Q Consensus       152 ~~~~~v~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~l~~~~~~~--~-----~~~~~~  222 (291)
                      .+++||.+.|+|++++.+||+++|||+++...+.+.+.  .....+..+    ...+++..+..+.  +     ...|++
T Consensus        10 ~~i~Hv~i~V~d~~~a~~fY~~~LGf~~v~~~~~e~g~r~~~~~~l~~G----~i~~~L~~p~~p~s~~~a~fl~~hG~G   85 (393)
T 3isq_A           10 LHFHSVTFWVGNAKQAASFYCSKMGFEPLAYRGLETGSREVVSHVIKQG----KIVFVLSSALNPWNKEMGDHLVKHGDG   85 (393)
T ss_dssp             EEEEEEEEECSCHHHHHHHHHHHHCCEEEEEESGGGTCCSEEEEEEEET----TEEEEEEEESSTTCHHHHHHHHHHCSE
T ss_pred             ceEeEEEEEECCHHHHHHHHHHhcCCEEEEEEcCCCCcEEEEEEEEecC----CEEEEEecCCCCCchHHHHHHHhcCCc
Confidence            46999999999999999999999999988765433221  123334422    3566666543221  1     125678


Q ss_pred             eeEEEEEecchHHhHHHHHHHHHHhCCeeecCCccCCCCC--ceEEEEECCCCceEEEeechhhh
Q 022818          223 YAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLN--TKITSFVDPDGWKTVLVDNEDFL  285 (291)
Q Consensus       223 ~~hi~~~v~di~~~~~~l~~~~~~~G~~~~~~~~~~~~~~--~~~~~~~DpdG~~iel~~~~~~~  285 (291)
                      +.|+||.|+|++++++++    +++|++++.+|...+...  .++..+++|.|+.+.|+++..+.
T Consensus        86 v~~iAf~VdDvdaa~~ra----~a~Ga~~v~eP~~~~~~~G~v~~a~I~~~Gd~~h~lVdr~~y~  146 (393)
T 3isq_A           86 VKDIAFEVEDCDYIVQKA----RERGAKIMREPWVEQDKFGKVKFAVLQTYGDTTHTLVEKMNYI  146 (393)
T ss_dssp             EEEEEEEEECHHHHHHHH----HHHTCCEEEEEEEEEETTEEEEEEEEECSTTCEEEEEEEESCC
T ss_pred             EEEEEEEeCCHHHHHHHH----HHCCCeEecCccccccCCceeEEEEEEeCCCcEEEEeccccCc
Confidence            999999999999999999    999999999886543211  36788999999999999976543

>1tsj_A Conserved hypothetical protein; structural genomics, protein structure initiative, PSI, nysgxrc; 2.60A {Staphylococcus aureus subsp} SCOP: d.32.1.7

Probab=99.26  E-value=9.3e-11  Score=86.90  Aligned_cols=116  Identities=10%  Similarity=0.095  Sum_probs=73.6

Q ss_pred             CceEEEeeeCChhhhHHHHHHhc-CCeeeeeeccC------CccceEEEeccccCCceeEEEEeeecCcceeecCcceeE
Q 022818          153 PLCQVMLRVGDLGRSIKFYEKAL-GMKLLRTVDKP------EYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQ  225 (291)
Q Consensus       153 ~~~~v~l~v~d~~~~~~fy~~~l-G~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~h  225 (291)
                      ++...-+.+.|.++|++||+++| |+++.......      ++....+.+..++    ..+-+.. ..+ . .. .. ..
T Consensus         5 ~i~p~l~~~~d~~eA~~FY~~~f~G~~~~~~~~~~~~~~~~~~~v~ha~l~~~~----~~~m~~d-~~~-~-~~-~~-~s   75 (139)
T 1tsj_A            5 KITTFLMFNNQAEEAVKLYTSLFEDSEIITMAKYGENGPGDPGTVQHSIFTLNG----QVFMAID-ANS-G-TE-LP-IS   75 (139)
T ss_dssp             SEEEEEECSSCHHHHHHHHHHHSSSCEEEEEEECC-----CTTSEEEEEEEETT----EEEEEEC-----------C-CC
T ss_pred             ceeEEEEECCCHHHHHHHHHHHcCCCEEEEEEecCcCCCCCCCcEEEEEEEECC----EEEEEEC-CCC-C-CC-ce-EE
Confidence            44443334459999999999999 99987432221      1222333333221    1221111 111 1 11 12 57


Q ss_pred             EEEEecc---hHHhHHHHHHHHHHhCCeeecCCccCCCCCceEEEEECCCCceEEEeechh
Q 022818          226 VAISTDD---VYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNED  283 (291)
Q Consensus       226 i~~~v~d---i~~~~~~l~~~~~~~G~~~~~~~~~~~~~~~~~~~~~DpdG~~iel~~~~~  283 (291)
                      +++.|+|   +++++++|    + +|++++.+|...++ |.+.++|+||+|+.|+|.....
T Consensus        76 l~~~~~d~~evd~~~~~l----~-~G~~v~~p~~~~~w-G~~~g~v~Dp~G~~W~i~~~~~  130 (139)
T 1tsj_A           76 LFVTVKDTIEMERLFNGL----K-DEGAILMPKTNMPP-YREFAWVQDKFGVSFQLALPEE  130 (139)
T ss_dssp             EEEECSSHHHHHHHHHHH----H-TTCEEEEEEEEETT-EEEEEEEECTTSCEEEEEECC-
T ss_pred             EEEECCCHHHHHHHHHHH----h-CCCEEeecccccCC-CceEEEEECCCCCEEEEeeccc
Confidence            8999987   56666666    7 79999999999998 5699999999999999997643

>3l20_A Putative uncharacterized protein; hypothetical protein, unknown function; 2.45A {Staphylococcus aureus}

Probab=99.26  E-value=4.8e-10  Score=85.60  Aligned_cols=117  Identities=15%  Similarity=0.162  Sum_probs=83.1

Q ss_pred             EEEEEEeCCHHHHHHHHHhhcCCEEEEEeecC--------------CCceeEEEEecCCCCcceEEEeeecCCCCcccCC
Q 022818           25 LHAVYRVGDLDRTIKFYTECFGMKLLRKRDVP--------------EEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIG   90 (291)
Q Consensus        25 ~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g   90 (291)
                      -...|.++|.++|++||+++||.++.......              ++....+.|.+++.  .+++  ....+. .+..+
T Consensus        27 i~PyL~f~~a~eAi~FY~~vFG~~~~~~~~~~d~p~~~~~~~~~~~~g~v~hael~i~g~--~lm~--~D~~g~-~~~~~  101 (172)
T 3l20_A           27 LFPYIAFENSKEALAYYEEVFGATDVKRLEVGEEQASHFGMTKEEAQEATMHAEFEVLGV--KVLC--SDSFGR-ADKIN  101 (172)
T ss_dssp             EEEEEEESCHHHHHHHHHHHSCCEEEEEEECCTTTTTTTTCCHHHHHTCEEEEEEEETTE--EEEE--EECTTC-CCCCC
T ss_pred             EEEEEEECCHHHHHHHHHHHcCCEEEEEEEcccCCcccccCCcccCCCcEEEEEEEECCE--EEEE--ECCCCC-CCCCC
Confidence            45667777999999999999999987654431              23455666776532  2332  222111 11122


Q ss_pred             CCceEEEEEe--------CCHHHHHHHHHHcC-CeeecCCeecCCCceEEEEEECCCCCEEEEEeCC
Q 022818           91 TGFGHFAIAT--------EDVYKLVENIRAKG-GNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRG  148 (291)
Q Consensus        91 ~~~~~i~~~v--------~d~~~~~~~l~~~G-~~~~~~~~~~~~g~~~~~~~~Dp~G~~iel~~~~  148 (291)
                       ....+++.+        +|+++++++|.+.| +++..++.+.+||.+. ..|+||+|+.|.|....
T Consensus       102 -~~~sl~l~~~~~d~~~~~dvd~~~~~l~~~G~a~v~~p~~~~~wG~r~-g~v~DpfG~~W~i~~~~  166 (172)
T 3l20_A          102 -NGISLLIDYDVNNKEDADKVEAFYEQIKDHSSIEIELPFADQFWGGKM-GVFTDKYGVRWMLHGQD  166 (172)
T ss_dssp             -SSEEEEEEEETTCHHHHHHHHHHHHHHTTCTTCEEEEEEEECTTSSEE-EEEECTTSCEEEEEEEC
T ss_pred             -CcEEEEEEEccCccCcHHHHHHHHHHHHhCCCceEecCccccCCCcEE-EEEECCCCCEEEEEeCC
Confidence             234566666        58999999999999 7999999999998875 88999999999997653

>3oms_A PHNB protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, methyltransferase, GL family; 1.90A {Bacillus cereus} SCOP: d.32.1.0

Probab=99.23  E-value=1.6e-10  Score=85.41  Aligned_cols=114  Identities=14%  Similarity=0.105  Sum_probs=75.6

Q ss_pred             EEeeeC-ChhhhHHHHHHhcC-Ceeeeeecc------CCccceEEEeccccCCceeEEEEeeecCcceeecCcceeEEEE
Q 022818          157 VMLRVG-DLGRSIKFYEKALG-MKLLRTVDK------PEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAI  228 (291)
Q Consensus       157 v~l~v~-d~~~~~~fy~~~lG-~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~hi~~  228 (291)
                      ..|.+. |.+++++||+++|| .++......      +++......+..+    +..|.+....+......+ ....++|
T Consensus        13 P~L~f~g~a~eA~~FY~~vFg~~~i~~~~~~~~~~~~~~g~v~ha~l~i~----g~~lm~~d~~~~~~~~~~-~~~~l~l   87 (138)
T 3oms_A           13 TFLMFEGKAEEAMNFYTSLFDQSEIVSISRYDENGPGKEGTVIHATFTLN----GQEFMCIDSYVNHNFTFT-PAMSLYV   87 (138)
T ss_dssp             EEEEESSCHHHHHHHHHTTSTTCCEEEEEECCTTCSSCTTSEEEEEEEET----TEEEEEEECSSCCSCCCC-TTSCEEE
T ss_pred             EEEEECCCHHHHHHHHHHHcCCceEEEEEecCCCCCCCCCcEEEEEEEEC----CEEEEEEcCCCCCCCCCC-CCEEEEE
Confidence            356777 89999999999999 565433211      2233333444432    233333322222111222 2367999


Q ss_pred             Eecc---hHHhHHHHHHHHHHhCCeeecCCccCCCCCceEEEEECCCCceEEEeec
Q 022818          229 STDD---VYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDN  281 (291)
Q Consensus       229 ~v~d---i~~~~~~l~~~~~~~G~~~~~~~~~~~~~~~~~~~~~DpdG~~iel~~~  281 (291)
                      .|+|   +++++++|    . +|.++..+|...++ +.++.+++||+|+.|.|.-.
T Consensus        88 ~~~d~~evd~~~~~l----~-~Gg~v~~p~~~~~w-g~~~~~~~Dp~G~~W~i~~~  137 (138)
T 3oms_A           88 TCETEEEIDTVFHKL----A-QDGAILMPLGSYPF-SKKFGWLNDKYGVSWQLTLA  137 (138)
T ss_dssp             EESSHHHHHHHHHHH----H-TTCEEEEEEEEETT-EEEEEEEECTTSCEEEEEEC
T ss_pred             EcCCHHHHHHHHHHH----H-cCCeEecCcccccC-CcEEEEEECCCCCEEEEEeC
Confidence            9999   77777777    6 58899999999998 46899999999999999753

>3l20_A Putative uncharacterized protein; hypothetical protein, unknown function; 2.45A {Staphylococcus aureus}

Probab=99.20  E-value=2.8e-10  Score=86.87  Aligned_cols=116  Identities=14%  Similarity=0.125  Sum_probs=77.3

Q ss_pred             EEEeeeCChhhhHHHHHHhcCCeeeeeeccC--------------CccceEEEeccccCCceeEEEEeeecCcceeecCc
Q 022818          156 QVMLRVGDLGRSIKFYEKALGMKLLRTVDKP--------------EYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGN  221 (291)
Q Consensus       156 ~v~l~v~d~~~~~~fy~~~lG~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~  221 (291)
                      ...|.+.|.+++++||+++||+++.......              ++....+.+..+    +..|.+....+. ....++
T Consensus        28 ~PyL~f~~a~eAi~FY~~vFG~~~~~~~~~~d~p~~~~~~~~~~~~g~v~hael~i~----g~~lm~~D~~g~-~~~~~~  102 (172)
T 3l20_A           28 FPYIAFENSKEALAYYEEVFGATDVKRLEVGEEQASHFGMTKEEAQEATMHAEFEVL----GVKVLCSDSFGR-ADKINN  102 (172)
T ss_dssp             EEEEEESCHHHHHHHHHHHSCCEEEEEEECCTTTTTTTTCCHHHHHTCEEEEEEEET----TEEEEEEECTTC-CCCCCS
T ss_pred             EEEEEECCHHHHHHHHHHHcCCEEEEEEEcccCCcccccCCcccCCCcEEEEEEEEC----CEEEEEECCCCC-CCCCCC
Confidence            4467788999999999999999976554321              122333333322    233333332221 112222


Q ss_pred             ceeEEEEEe--------cchHHhHHHHHHHHHHhC-CeeecCCccCCCCCceEEEEECCCCceEEEeech
Q 022818          222 AYAQVAIST--------DDVYKSAEVVNLVTQELG-GKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNE  282 (291)
Q Consensus       222 ~~~hi~~~v--------~di~~~~~~l~~~~~~~G-~~~~~~~~~~~~~~~~~~~~~DpdG~~iel~~~~  282 (291)
                      + ..+++.+        +|+++++++|    +++| ++++.+|...++ +.++++|+||+|+.|+|....
T Consensus       103 ~-~sl~l~~~~~d~~~~~dvd~~~~~l----~~~G~a~v~~p~~~~~w-G~r~g~v~DpfG~~W~i~~~~  166 (172)
T 3l20_A          103 G-ISLLIDYDVNNKEDADKVEAFYEQI----KDHSSIEIELPFADQFW-GGKMGVFTDKYGVRWMLHGQD  166 (172)
T ss_dssp             S-EEEEEEEETTCHHHHHHHHHHHHHH----TTCTTCEEEEEEEECTT-SSEEEEEECTTSCEEEEEEEC
T ss_pred             c-EEEEEEEccCccCcHHHHHHHHHHH----HhCCCceEecCccccCC-CcEEEEEECCCCCEEEEEeCC
Confidence            3 4566766        4677777777    9999 799999999988 468999999999999998653

>1cjx_A 4-hydroxyphenylpyruvate dioxygenase; oxidoreductase, iron; 2.40A {Pseudomonas fluorescens} SCOP: d.32.1.3 d.32.1.3

Probab=99.20  E-value=1.2e-10  Score=100.33  Aligned_cols=128  Identities=16%  Similarity=0.166  Sum_probs=84.9

Q ss_pred             CcceeeEEEEEEeC--CHHHHHHHHHhhcCCEEEEEeecCCC--ceeEEEEecCCCCcceEEEeeec-CCC-Cc------
Q 022818           19 KDKRRFLHAVYRVG--DLDRTIKFYTECFGMKLLRKRDVPEE--KYSNAFLGFGPEQSHFVVELTYN-YGV-TS------   86 (291)
Q Consensus        19 ~~~~~i~hv~l~v~--d~~~~~~FY~~~lG~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~~~~~-~~~-~~------   86 (291)
                      ..+.+|+|+++.|+  |++++.+||+++|||+.......++.  ......+....+.  ..+++... ... +.      
T Consensus       154 ~~i~~idHv~l~V~~~dl~~a~~FY~~vLGf~~~~~~~~~~~~~~~~~~~~~~~~g~--~~i~L~~~~~~~~~~~~~~~~  231 (357)
T 1cjx_A          154 AGLKVIDHLTHNVYRGRMVYWANFYEKLFNFREARYFDIKGEYTGLTSKAMSAPDGM--IRIPLNEESSKGAGQIEEFLM  231 (357)
T ss_dssp             TSEEEEEEECEECCTTHHHHHHHHHHHHHCCEEEEEEEEECSSCEEEEEEEECTTSS--CEEEEEEECTTCCSHHHHHHH
T ss_pred             CCeeEECceEEeechhhHHHHHHHHHHhhCCceeeEEEeccCCcceEEEEEECCCCC--EEEEEeeecCCCCChHHHhHH
Confidence            56899999999999  99999999999999999876543321  1212222222222  23444433 111 11      


Q ss_pred             ccCCCCceEEEEEeCCHHHHHHHHHHcCCeeec-CCe---------ecCCCce-------EEEEEEC----CCCCEEEEE
Q 022818           87 YDIGTGFGHFAIATEDVYKLVENIRAKGGNVTR-EPG---------PLKGGTT-------HIAFVKD----PDGYIFELI  145 (291)
Q Consensus        87 ~~~g~~~~~i~~~v~d~~~~~~~l~~~G~~~~~-~~~---------~~~~g~~-------~~~~~~D----p~G~~iel~  145 (291)
                      ...+.+++|+||.|+|++++.++|+++|+++.. .|.         ....|..       ..++-+|    |+|+++++.
T Consensus       232 ~~~g~g~~HiAf~v~Di~~~~~~L~~~Gv~~~~~~p~~Yy~~l~~r~~~~~~~~~~l~~~~il~d~d~~~~~~g~llqif  311 (357)
T 1cjx_A          232 QFNGEGIQHVAFLTDDLVKTWDALKKIGMRFMTAPPDTYYEMLEGRLPDHGEPVDQLQARGILLDGSSVEGDKRLLLQIF  311 (357)
T ss_dssp             HHTSSBCCEEEEEESCHHHHHHHHHHTTCCBCCCCCHHHHHTHHHHSTTCCCCHHHHHHHTCEEEEEEETTEEEEEEEEE
T ss_pred             hcCCCCeeEEEEEcCCHHHHHHHHHHcCCcccCCCChHHHHHHHHHhccccccHHHHHHcCeEEecCCCCCCCCeEEEEe
Confidence            114668999999999999999999999999877 551         1111110       0255577    788888887


Q ss_pred             eCC
Q 022818          146 QRG  148 (291)
Q Consensus       146 ~~~  148 (291)
                      ...
T Consensus       312 t~~  314 (357)
T 1cjx_A          312 SET  314 (357)
T ss_dssp             BCC
T ss_pred             ccC
Confidence            654

>1sp8_A 4-hydroxyphenylpyruvate dioxygenase; oxidoreductase; 2.00A {Zea mays} SCOP: d.32.1.3 d.32.1.3

Probab=99.17  E-value=1.7e-10  Score=101.16  Aligned_cols=124  Identities=15%  Similarity=0.083  Sum_probs=90.2

Q ss_pred             CCceEEEeeeCChhhhHHHHHHhcCCeeeeeeccCC--ccceEEEeccccCCceeEEEEeeecCc--------------c
Q 022818          152 EPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPE--YKYTLAMLGYAEEDQTTVLELTYNYGV--------------T  215 (291)
Q Consensus       152 ~~~~~v~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~l~l~~~~~~--------------~  215 (291)
                      .++.||.|.|+|++++.+||++.|||+++.......  .....+++..+    ...++|.....+              .
T Consensus        30 ~~l~hV~i~V~Dle~a~~fY~~~LGf~~~~~~~~~~G~~~~~~~~~~~G----~~~l~L~~~~~~~~~~~~~p~~~~~~~  105 (418)
T 1sp8_A           30 LAFHHVELWCADAASAAGRFSFGLGAPLAARSDLSTGNSAHASLLLRSG----SLSFLFTAPYAHGADAATAALPSFSAA  105 (418)
T ss_dssp             EEEEEEEEECSCHHHHHHHHHHHHTCCEEEEESGGGTCCSEEEEEEEET----TEEEEEEEECCSSCCGGGCSSTTCCHH
T ss_pred             ceEEEEEEEeCCHHHHHHHHHHhCCCEEEEEEcCCCCCcceEEEEEeeC----CEEEEEecCCCCcccccccccccccch
Confidence            468999999999999999999999999876644322  13344445432    355666554221              1


Q ss_pred             e-----eecCcceeEEEEEecchHHhHHHHHHHHHHhCCeeecCCccCCCCCceEEEEECCCCceEEEeechhh
Q 022818          216 E-----YTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNEDF  284 (291)
Q Consensus       216 ~-----~~~~~~~~hi~~~v~di~~~~~~l~~~~~~~G~~~~~~~~~~~~~~~~~~~~~DpdG~~iel~~~~~~  284 (291)
                      .     ...+++..|++|.|+|++++++++    +++|++++.+|..... ..++..+++|+|..++|+++...
T Consensus       106 ~~~~~~~~hg~gv~~iAf~V~Dv~~a~~~l----~~~Ga~~~~~p~~~~~-~~~~~~i~~~Gg~~~~lvd~~~~  174 (418)
T 1sp8_A          106 AARRFAADHGLAVRAVALRVADAEDAFRAS----VAAGARPAFGPVDLGR-GFRLAEVELYGDVVLRYVSYPDG  174 (418)
T ss_dssp             HHHHHHHHHSSEEEEEEEEESCHHHHHHHH----HTTTCCEEEEEEEEET-TEEEEEEEEETTEEEEEEECCTT
T ss_pred             hHHHHHhhcCCeeEEEEEEeCCHHHHHHHH----HHCCCEEEeccccccC-ceEEEEEecCCCEEEEEEccCCC
Confidence            0     124578999999999999999999    9999999888754312 23567778888888888887643

>3oms_A PHNB protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, methyltransferase, GL family; 1.90A {Bacillus cereus} SCOP: d.32.1.0

Probab=99.16  E-value=2e-09  Score=79.47  Aligned_cols=114  Identities=12%  Similarity=0.226  Sum_probs=78.8

Q ss_pred             EEEEeC-CHHHHHHHHHhhcC-CEEEEEeec------CCCceeEEEEecCCCCcceEEEeeecCCCCcccCCCCceEEEE
Q 022818           27 AVYRVG-DLDRTIKFYTECFG-MKLLRKRDV------PEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAI   98 (291)
Q Consensus        27 v~l~v~-d~~~~~~FY~~~lG-~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~~~~i~~   98 (291)
                      ..|.++ |.+++++||+++|| .++......      .++...++.+.+++.  .+++  ........+..+ ....+++
T Consensus        13 P~L~f~g~a~eA~~FY~~vFg~~~i~~~~~~~~~~~~~~g~v~ha~l~i~g~--~lm~--~d~~~~~~~~~~-~~~~l~l   87 (138)
T 3oms_A           13 TFLMFEGKAEEAMNFYTSLFDQSEIVSISRYDENGPGKEGTVIHATFTLNGQ--EFMC--IDSYVNHNFTFT-PAMSLYV   87 (138)
T ss_dssp             EEEEESSCHHHHHHHHHTTSTTCCEEEEEECCTTCSSCTTSEEEEEEEETTE--EEEE--EECSSCCSCCCC-TTSCEEE
T ss_pred             EEEEECCCHHHHHHHHHHHcCCceEEEEEecCCCCCCCCCcEEEEEEEECCE--EEEE--EcCCCCCCCCCC-CCEEEEE
Confidence            456667 89999999999999 566433222      234556677776542  2222  221111111122 2356899


Q ss_pred             EeCC---HHHHHHHHHHcCCeeecCCeecCCCceEEEEEECCCCCEEEEEeC
Q 022818           99 ATED---VYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQR  147 (291)
Q Consensus        99 ~v~d---~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~Dp~G~~iel~~~  147 (291)
                      .|+|   +++++++|. .|.++..+|.+.+||.+. ..++||+|+.|.|...
T Consensus        88 ~~~d~~evd~~~~~l~-~Gg~v~~p~~~~~wg~~~-~~~~Dp~G~~W~i~~~  137 (138)
T 3oms_A           88 TCETEEEIDTVFHKLA-QDGAILMPLGSYPFSKKF-GWLNDKYGVSWQLTLA  137 (138)
T ss_dssp             EESSHHHHHHHHHHHH-TTCEEEEEEEEETTEEEE-EEEECTTSCEEEEEEC
T ss_pred             EcCCHHHHHHHHHHHH-cCCeEecCcccccCCcEE-EEEECCCCCEEEEEeC
Confidence            9999   999999995 688999999999998764 8899999999998753

>3e0r_A C3-degrading proteinase (CPPA protein); MCSG, PSI, SAD, structural GE protein structure initiative; 2.30A {Streptococcus pneumoniae}

Probab=98.92  E-value=1.4e-08  Score=80.53  Aligned_cols=112  Identities=18%  Similarity=0.163  Sum_probs=72.7

Q ss_pred             eEEEeeeCChhhhHHHHHHhcCCeeeeeeccCCccceEEEeccccCCceeEEEEeeecCcceeecCcceeEE---EEEec
Q 022818          155 CQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQV---AISTD  231 (291)
Q Consensus       155 ~~v~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~hi---~~~v~  231 (291)
                      ....|.|.|.+++.+||+++|||++..+..      +.+.++....  ...|.+-..+... .....|..|+   ++.|+
T Consensus        12 ~~p~LrV~nr~~~~~FY~~vlG~kll~ee~------~~a~lg~~~~--~~~L~lEEsp~~~-~~~~~Glkh~a~i~i~vp   82 (244)
T 3e0r_A           12 IIPTLKANNRKLNETFYIETLGMKALLEES------AFLSLGDQTG--LEKLVLEEAPSMR-TRKVEGRKKLARLIVKVE   82 (244)
T ss_dssp             EEEEEEESSHHHHHHHHTTTTCCEEEEECS------SEEEEECTTC--CEEEEEEECCTTT-CBCCCSSCSEEEEEEEES
T ss_pred             EeeEEEECCHHHHHHHHHhccCcEEeeccC------cEEEeecCCC--cceEEEEeCCCcc-cccccccceeeeEEEEcC
Confidence            456799999999999999999999876643      4566664332  2334332222111 1233566777   59999


Q ss_pred             chHHhHHHHHHHHHHhCCeeecCCccCCCCCceEEEEECCCCceEEEeechh
Q 022818          232 DVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNED  283 (291)
Q Consensus       232 di~~~~~~l~~~~~~~G~~~~~~~~~~~~~~~~~~~~~DpdG~~iel~~~~~  283 (291)
                      + .+.++.+    ..++..+...-.   +..+..+|+.||+||.|||....+
T Consensus        83 ~-~~el~~l----L~~~~~~~~~~~---gdhgyA~yl~dPEGn~ieiyae~d  126 (244)
T 3e0r_A           83 N-PLEIEGI----LSKTDSIHRLYK---GQNGYAFEIFSPEDDLILIHAEDD  126 (244)
T ss_dssp             S-HHHHHHH----HTTCSCCSEEEE---CSSSEEEEEECTTCCEEEEECCSC
T ss_pred             C-HHHHHHH----Hhcccccccccc---cCCcEEEEEECCCCCeEEEEEcCC
Confidence            9 5555555    456655421111   123568999999999999997654

>3p8a_A Uncharacterized protein; mainly antiparallel beta sheets, alpha and beta protein, UNK function; HET: MSE BTB PG4; 1.95A {Staphylococcus aureus}

Probab=98.74  E-value=1.3e-06  Score=71.62  Aligned_cols=159  Identities=14%  Similarity=0.154  Sum_probs=98.4

Q ss_pred             cccCCCCCcceeeEEEEEEeCCHHHHHHHHHhhcC-----CEEEEEeecCCCceeEEEEecCCCCcceEEEeeecCCC--
Q 022818           12 ELLEWPKKDKRRFLHAVYRVGDLDRTIKFYTECFG-----MKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGV--   84 (291)
Q Consensus        12 ~~~~~~~~~~~~i~hv~l~v~d~~~~~~FY~~~lG-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~--   84 (291)
                      ...++-..|+.+|+|+++.|++++        .||     |.+......+..+..-..+.+++.    .||+......  
T Consensus        13 ~~~~~~~~M~~~lDHlVi~v~~l~--------~lG~~~~~f~~~~GG~H~~~GT~N~Li~fdg~----YLElIai~~~~~   80 (274)
T 3p8a_A           13 GLVPRGSHMILKFDHIIHYIDQLD--------RFSFPGDVIKLHSGGYHHKYGTFNKLGYINEN----YIELLDVENNEK   80 (274)
T ss_dssp             --------CCCEEEEEEEECTTGG--------GCCCGGGSSCCEEEEEETTTTEEEEEEECSSS----EEEEEEESCHHH
T ss_pred             ccccCCcCccccCCEEEEEeccHH--------HcCCccceEEeCCCccCCCCCCEEEEEeeCCE----EEEEEeecCccc
Confidence            344555678999999999999884        356     887765554444444444444332    3444432211  


Q ss_pred             ---------C--cc-------cCCCCceEEEEEeCCHHHHHHHHHHcCCeeecC---CeecCCCc---eEEEEEECCC--
Q 022818           85 ---------T--SY-------DIGTGFGHFAIATEDVYKLVENIRAKGGNVTRE---PGPLKGGT---THIAFVKDPD--  138 (291)
Q Consensus        85 ---------~--~~-------~~g~~~~~i~~~v~d~~~~~~~l~~~G~~~~~~---~~~~~~g~---~~~~~~~Dp~--  138 (291)
                               .  .+       ..+.|+.+++++++|+++..++|.++|+.+..+   .+..++|.   .+.++..|+.  
T Consensus        81 ~~~~~~~~~~~~~f~~~~~~~~~geGl~~~alrt~Di~a~~a~l~~~Gl~~~~p~~~sR~~pDG~~l~W~l~~~~d~~~~  160 (274)
T 3p8a_A           81 LKKMAKTIEGGVAFATQIVQEKYEQGFKNICLHTNDIEAVKNKLQSEQVEVVGPIQMERDTHKDGKVKWQLLYIMNQDDD  160 (274)
T ss_dssp             HHHHTTSTGGGTCTTTHHHHTTTCCEEEEEEEECSCHHHHHHHHHTTTCEEEEEEEEEECCCC--CEEEEEEEEECSSCC
T ss_pred             ccccccccCccchHHHHhhhhccCCCeEEEEEecCCHHHHHHHHHHcCCCcCCCccccccCCCCCEEEEEEEeccCCCcc
Confidence                     1  11       246799999999999999999999999875432   22334443   2235556664  


Q ss_pred             CCEE-EEEeCC-CC-------------CCCceEEEeeeCChhhhHHHHHHhcCCeeeee
Q 022818          139 GYIF-ELIQRG-PT-------------PEPLCQVMLRVGDLGRSIKFYEKALGMKLLRT  182 (291)
Q Consensus       139 G~~i-el~~~~-~~-------------~~~~~~v~l~v~d~~~~~~fy~~~lG~~~~~~  182 (291)
                      +..+ -|++.. +.             ...|.+|.+.+.|++++.+.|+++||......
T Consensus       161 ~~~~PFfiqw~~~~~~r~~~~~~HpnGa~gI~~vvi~~~dp~~~~~~~~~l~g~~~~~~  219 (274)
T 3p8a_A          161 EIKPPFFIQWEESDSMRTKKLQKYFQKQFSIETVIVKSKNRSQTVSNWLKWFDMDIVEE  219 (274)
T ss_dssp             SSCCCEEEEESSCTTHHHHHHTTTCCTTEEEEEEEEEETTHHHHHHHHHHHHCCEEEEE
T ss_pred             CCCccEEEecCCCccccccccccCCCccceEEEEEEEeCCHHHHHHHHHHHhCCCcccc
Confidence            2222 334322 11             13589999999999999999999999997654

>1u69_A Hypothetical protein; structural genomics, MSCG, pseudomonas aeruginosa PAO1, HYPO protein, protein structure initiative (PSI); 1.60A {Pseudomonas aeruginosa} SCOP: d.32.1.7

Probab=98.23  E-value=2e-05  Score=59.26  Aligned_cols=106  Identities=11%  Similarity=0.009  Sum_probs=63.5

Q ss_pred             EeeeC-ChhhhHHHHHHhc-CCeeeeeecc-------CCccceEEEeccccCCceeEEEEeeecCcceeecCcceeEEEE
Q 022818          158 MLRVG-DLGRSIKFYEKAL-GMKLLRTVDK-------PEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAI  228 (291)
Q Consensus       158 ~l~v~-d~~~~~~fy~~~l-G~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~hi~~  228 (291)
                      .|.+. |.+++++||+++| |.++......       +++......+..+    +..+-+....+  .... +....+.+
T Consensus        10 yL~f~g~a~eAi~FY~~vF~ga~i~~~~~~~~~~~~~~~g~Vmhael~i~----g~~~m~~d~~p--~~~~-~~~~sl~v   82 (163)
T 1u69_A           10 CLWYDSAALEAATFYAETFPDSAVLAVHRAPGDYPSGKEGDVLTVEFRVM----GIPCLGLNGGP--AFRH-SEAFSFQV   82 (163)
T ss_dssp             EEEESSCHHHHHHHHHHHSTTEEEEEEEECSSCBTTBCTTSEEEEEEEET----TEEEEEEECCT--TCCC-CTTEEEEE
T ss_pred             EEEECCCHHHHHHHHHHHhCCCEEeEEEeccCCCCCCCCCeEEEEEEEEC----CEEEEEECCCC--CcCC-CCceEEEE
Confidence            46666 9999999999999 9887643221       1233333333322    12222222111  1112 22347888


Q ss_pred             EecchHHhHHHHHHHHHHhCCeeecCCccCCCCCceEEEEECCCCceEEEeech
Q 022818          229 STDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNE  282 (291)
Q Consensus       229 ~v~di~~~~~~l~~~~~~~G~~~~~~~~~~~~~~~~~~~~~DpdG~~iel~~~~  282 (291)
                      .++| .+..++++++|.++|.++.           ++..++||.|+.|.|..+.
T Consensus        83 ~~~d-~~e~d~~~~~L~~~Gg~v~-----------~~G~v~D~fGv~W~i~~~~  124 (163)
T 1u69_A           83 ATDD-QAETDRLWNAIVDNGGEES-----------ACGWCRDKWGISWQITPRV  124 (163)
T ss_dssp             EESS-HHHHHHHHHHHHHTTCEEC-----------STTEEECTTSCEEEEEEHH
T ss_pred             EeCC-HHHHHHHHHHHHhCCCEEE-----------EEEEEECCCCCEEEEEeEc
Confidence            8987 3334444444487899876           2347999999999998764

>1u69_A Hypothetical protein; structural genomics, MSCG, pseudomonas aeruginosa PAO1, HYPO protein, protein structure initiative (PSI); 1.60A {Pseudomonas aeruginosa} SCOP: d.32.1.7

Probab=98.20  E-value=2.8e-05  Score=58.49  Aligned_cols=131  Identities=16%  Similarity=0.177  Sum_probs=86.7

Q ss_pred             EEEEeC-CHHHHHHHHHhhc-CCEEEEEeec------C-CCceeEEEEecCCCCcceEEEeeecCCCCcccCCCCceEEE
Q 022818           27 AVYRVG-DLDRTIKFYTECF-GMKLLRKRDV------P-EEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFA   97 (291)
Q Consensus        27 v~l~v~-d~~~~~~FY~~~l-G~~~~~~~~~------~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~~~~i~   97 (291)
                      ..|..+ |.+++++||+++| |.++......      + ++...++.|.+++.  .+++  ... .+ .+... ....++
T Consensus         9 PyL~f~g~a~eAi~FY~~vF~ga~i~~~~~~~~~~~~~~~g~Vmhael~i~g~--~~m~--~d~-~p-~~~~~-~~~sl~   81 (163)
T 1u69_A            9 ICLWYDSAALEAATFYAETFPDSAVLAVHRAPGDYPSGKEGDVLTVEFRVMGI--PCLG--LNG-GP-AFRHS-EAFSFQ   81 (163)
T ss_dssp             EEEEESSCHHHHHHHHHHHSTTEEEEEEEECSSCBTTBCTTSEEEEEEEETTE--EEEE--EEC-CT-TCCCC-TTEEEE
T ss_pred             EEEEECCCHHHHHHHHHHHhCCCEEeEEEeccCCCCCCCCCeEEEEEEEECCE--EEEE--ECC-CC-CcCCC-CceEEE
Confidence            456666 9999999999999 9988753222      1 34566677777543  2222  221 11 11122 223788


Q ss_pred             EEeCC---HHHHHHHHHHcCCeeecCCeecCCCceEEEEEECCCCCEEEEEeCCCCCCCceEEEeeeCChhhhHHHHHHh
Q 022818           98 IATED---VYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRGPTPEPLCQVMLRVGDLGRSIKFYEKA  174 (291)
Q Consensus        98 ~~v~d---~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~Dp~G~~iel~~~~~~~~~~~~v~l~v~d~~~~~~fy~~~  174 (291)
                      +.++|   +++++++|.+.|.++.      ..     ..++||.|+.|.|....      ..--+.-.|.+++.+-++..
T Consensus        82 v~~~d~~e~d~~~~~L~~~Gg~v~------~~-----G~v~D~fGv~W~i~~~~------~~~~~~d~d~~~~~r~~~am  144 (163)
T 1u69_A           82 VATDDQAETDRLWNAIVDNGGEES------AC-----GWCRDKWGISWQITPRV------LSEAIASPDRAAARRAFEAM  144 (163)
T ss_dssp             EEESSHHHHHHHHHHHHHTTCEEC------ST-----TEEECTTSCEEEEEEHH------HHHHHTCSSHHHHHHHHHHH
T ss_pred             EEeCCHHHHHHHHHHHHhCCCEEE------EE-----EEEECCCCCEEEEEeEc------hHHhccCCCHHHHHHHHHHH
Confidence            88887   6778899988888766      12     35899999999988531      01112346889999999999


Q ss_pred             cCCeeee
Q 022818          175 LGMKLLR  181 (291)
Q Consensus       175 lG~~~~~  181 (291)
                      |+++..+
T Consensus       145 ~~m~k~d  151 (163)
T 1u69_A          145 MTMGRID  151 (163)
T ss_dssp             TTCSSCC
T ss_pred             HCCccee
Confidence            9987653

>3opy_B 6-phosphofructo-1-kinase beta-subunit; ATP binding, fructose-6-phosphate bindi magnesium binding, citrate binding, ADP binding; HET: ATP; 3.05A {Pichia pastoris}

Probab=97.53  E-value=0.00017  Score=67.88  Aligned_cols=109  Identities=17%  Similarity=0.229  Sum_probs=68.6

Q ss_pred             CChhhhHHHHHHhcCCeeeeeeccCCccceEEEeccccCCceeEEEEeee-cCcc------------------eeecCcc
Q 022818          162 GDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYN-YGVT------------------EYTKGNA  222 (291)
Q Consensus       162 ~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~-~~~~------------------~~~~~~~  222 (291)
                      .-++++++||++.|++......   +.......+...+  ...++++... .+..                  ..+.+ -
T Consensus        21 ~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dW~~-~   94 (941)
T 3opy_B           21 SLLQASIDFYTNFLGFAIRKNS---NQKLFWLQLEEDQ--NNVSIQLILDPEHAASVSQIDQNIRNLTRSLYRKDWRS-I   94 (941)
T ss_dssp             CC-HHHHHHHHHTTCCEECSSC---SCCC---EECCTT--SCCEEEEECSSCSCHHHHHHHHHHHCCC-----------C
T ss_pred             HHHHHHHHHHHhhccceecccc---CCcceeEEEecCC--CeEEEEEEeccccchhHHHHHHHHhhhhcccccccccc-c
Confidence            5588999999999999865422   2111123343222  3455655433 1111                  01112 2


Q ss_pred             eeEEEEEecchHHhHHHHHHHHHHhCCeeecCCccCCCCCceEEEEECCCCceEEEeechh
Q 022818          223 YAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNED  283 (291)
Q Consensus       223 ~~hi~~~v~di~~~~~~l~~~~~~~G~~~~~~~~~~~~~~~~~~~~~DpdG~~iel~~~~~  283 (291)
                      ..|++|.+.|++++.+.|    .+.+..+...|...   +...+|..||+||.|+|.+.+.
T Consensus        95 ~~~l~f~~~dL~~~~~~L----~~~~~~~Q~~ps~~---~~~e~yt~DPlGNvIgfs~~~~  148 (941)
T 3opy_B           95 QSNIAFKSSSLSKLVKLL----KDGGHPVQQSPNEI---SPFEVYTVDPLGSLIGFSGFKN  148 (941)
T ss_dssp             CCEEEEEESCHHHHHHHH----HTTTCCCBCSSSSC---SCEEECCSSCCEEEECC-CCSS
T ss_pred             CceEEEEeCCHHHHHHHH----HhcCCccccCCCcC---CCceEEeECCCCCEEEEeccCC
Confidence            239999999999999999    89988776666643   2367999999999999998764

>3opy_B 6-phosphofructo-1-kinase beta-subunit; ATP binding, fructose-6-phosphate bindi magnesium binding, citrate binding, ADP binding; HET: ATP; 3.05A {Pichia pastoris}

Probab=97.52  E-value=0.00022  Score=67.24  Aligned_cols=121  Identities=17%  Similarity=0.195  Sum_probs=73.1

Q ss_pred             cceeeEEEEEEeC---CHHHHHHHHHhhcCCEEEEEeecCCCceeEEEEecCCCCcceEEEeeec--CC-----------
Q 022818           20 DKRRFLHAVYRVG---DLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYN--YG-----------   83 (291)
Q Consensus        20 ~~~~i~hv~l~v~---d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~--~~-----------   83 (291)
                      .+++...+.+...   .+++++.||+++|++......   +......++.  +......+.+.-.  ..           
T Consensus         6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (941)
T 3opy_B            6 LFNGTSFITLFAPNISLLQASIDFYTNFLGFAIRKNS---NQKLFWLQLE--EDQNNVSIQLILDPEHAASVSQIDQNIR   80 (941)
T ss_dssp             CSCEEEEEEEECCC-CC-HHHHHHHHHTTCCEECSSC---SCCC---EEC--CTTSCCEEEEECSSCSCHHHHHHHHHHH
T ss_pred             eecceeEEEEEeCCHHHHHHHHHHHHhhccceecccc---CCcceeEEEe--cCCCeEEEEEEeccccchhHHHHHHHHh
Confidence            4677777777765   678999999999999775421   2111223332  2222333433322  00           


Q ss_pred             -C-----CcccCCCCceEEEEEeCCHHHHHHHHHHcCCeeecCCeecCCCceEEEEEECCCCCEEEEEeCCC
Q 022818           84 -V-----TSYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRGP  149 (291)
Q Consensus        84 -~-----~~~~~g~~~~~i~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~Dp~G~~iel~~~~~  149 (291)
                       .     ..-|.+ ...|+.|.+.|++++.+.|.+.+.++-..|.+.  +... +|+.||+||+|+|.+...
T Consensus        81 ~~~~~~~~~dW~~-~~~~l~f~~~dL~~~~~~L~~~~~~~Q~~ps~~--~~~e-~yt~DPlGNvIgfs~~~~  148 (941)
T 3opy_B           81 NLTRSLYRKDWRS-IQSNIAFKSSSLSKLVKLLKDGGHPVQQSPNEI--SPFE-VYTVDPLGSLIGFSGFKN  148 (941)
T ss_dssp             CCC-----------CCCEEEEEESCHHHHHHHHHTTTCCCBCSSSSC--SCEE-ECCSSCCEEEECC-CCSS
T ss_pred             hhhcccccccccc-cCceEEEEeCCHHHHHHHHHhcCCccccCCCcC--CCce-EEeECCCCCEEEEeccCC
Confidence             0     001112 223999999999999999999998765544433  2333 888999999999988763

>3p8a_A Uncharacterized protein; mainly antiparallel beta sheets, alpha and beta protein, UNK function; HET: MSE BTB PG4; 1.95A {Staphylococcus aureus}

Probab=95.83  E-value=0.029  Score=45.82  Aligned_cols=89  Identities=11%  Similarity=0.066  Sum_probs=57.2

Q ss_pred             CCCceEEEeeeCChhhhHHHHHHhcCCeeeeeeccC--CccceEEEeccccCCceeEEEEeeecCcce------------
Q 022818          151 PEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKP--EYKYTLAMLGYAEEDQTTVLELTYNYGVTE------------  216 (291)
Q Consensus       151 ~~~~~~v~l~v~d~~~~~~fy~~~lG~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~------------  216 (291)
                      ..+++|+.+.|.++++..  |.. .||.+.....-+  +-.-.++.+.      +..||+....+...            
T Consensus        22 ~~~lDHlVi~v~~l~~lG--~~~-~~f~~~~GG~H~~~GT~N~Li~fd------g~YLElIai~~~~~~~~~~~~~~~~~   92 (274)
T 3p8a_A           22 ILKFDHIIHYIDQLDRFS--FPG-DVIKLHSGGYHHKYGTFNKLGYIN------ENYIELLDVENNEKLKKMAKTIEGGV   92 (274)
T ss_dssp             CCEEEEEEEECTTGGGCC--CGG-GSSCCEEEEEETTTTEEEEEEECS------SSEEEEEEESCHHHHHHHTTSTGGGT
T ss_pred             cccCCEEEEEeccHHHcC--Ccc-ceEEeCCCccCCCCCCEEEEEeeC------CEEEEEEeecCcccccccccccCccc
Confidence            457999999999885331  111 128766543222  2222455552      45777766543210            


Q ss_pred             --------eecCcceeEEEEEecchHHhHHHHHHHHHHhCCeee
Q 022818          217 --------YTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKIT  252 (291)
Q Consensus       217 --------~~~~~~~~hi~~~v~di~~~~~~l~~~~~~~G~~~~  252 (291)
                              ...++|+.++++.++|++++.+++    .++|+.+.
T Consensus        93 ~f~~~~~~~~~geGl~~~alrt~Di~a~~a~l----~~~Gl~~~  132 (274)
T 3p8a_A           93 AFATQIVQEKYEQGFKNICLHTNDIEAVKNKL----QSEQVEVV  132 (274)
T ss_dssp             CTTTHHHHTTTCCEEEEEEEECSCHHHHHHHH----HTTTCEEE
T ss_pred             hHHHHhhhhccCCCeEEEEEecCCHHHHHHHH----HHcCCCcC
Confidence                    124569999999999999999999    99998753

>3opy_A 6-phosphofructo-1-kinase alpha-subunit; ATP binding, fructose-6-phosphate bindi magnesium binding, citrate binding, ADP binding; HET: ATP; 3.05A {Pichia pastoris}

Probab=91.30  E-value=3.2  Score=39.70  Aligned_cols=51  Identities=18%  Similarity=0.227  Sum_probs=35.7

Q ss_pred             ceEEEEEeCCHHHHHHHHHHcCCeeecCCeecCCCceEEEEEECCCCCEEEEEeCC
Q 022818           93 FGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRG  148 (291)
Q Consensus        93 ~~~i~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~Dp~G~~iel~~~~  148 (291)
                      ...+.|.+.|+..+.+.|.+..++.  .|.+...  . -+|..||-||.+.|....
T Consensus       124 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~--~-~~~~~dp~~~~~~~~~~~  174 (989)
T 3opy_A          124 PGEVTFFTASIDKLKAKLIEIGAEI--IPSKIDL--V-EFSTRDPMGDVISFSSYP  174 (989)
T ss_dssp             SCEEEEECSCHHHHHHHHHHSSCCB--CCCC--C--C-CEEEESSSEEEEECCSSS
T ss_pred             cceEEEEeCcHHHHHHHhhhccccc--CCCCCCc--e-eEEEecCCCCEEeeecCC
Confidence            3568899999999999998873332  2222211  1 278999999999987654

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	291
d1f9za_	135	d.32.1.1 (A:) Glyoxalase I (lactoylglutathione lya	7e-29
d1f9za_	135	d.32.1.1 (A:) Glyoxalase I (lactoylglutathione lya	2e-17
d2c21a1	139	d.32.1.1 (A:3-141) Glyoxalase I (lactoylglutathion	6e-27
d2c21a1	139	d.32.1.1 (A:3-141) Glyoxalase I (lactoylglutathion	3e-13
d1qipa_	176	d.32.1.1 (A:) Glyoxalase I (lactoylglutathione lya	3e-25
d1qipa_	176	d.32.1.1 (A:) Glyoxalase I (lactoylglutathione lya	2e-11
d1twua_	137	d.32.1.8 (A:) Hypothetical protein YycE {Bacillus	2e-17
d1twua_	137	d.32.1.8 (A:) Hypothetical protein YycE {Bacillus	2e-11
d1sqda1	167	d.32.1.3 (A:14-180) 4-hydroxyphenylpyruvate dioxyg	2e-17
d1sqda1	167	d.32.1.3 (A:14-180) 4-hydroxyphenylpyruvate dioxyg	3e-05
d1sqia1	149	d.32.1.3 (A:8-156) 4-hydroxyphenylpyruvate dioxyge	3e-17
d1sp8a1	172	d.32.1.3 (A:36-207) 4-hydroxyphenylpyruvate dioxyg	5e-17
d1sp8a1	172	d.32.1.3 (A:36-207) 4-hydroxyphenylpyruvate dioxyg	6e-04
d1zswa1	144	d.32.1.10 (A:1-144) Hypothetical protein BC1024 {B	3e-16
d1zswa1	144	d.32.1.10 (A:1-144) Hypothetical protein BC1024 {B	9e-07
d1mpya2	162	d.32.1.3 (A:146-307) Catechol 2,3-dioxygenase (met	1e-15
d1mpya2	162	d.32.1.3 (A:146-307) Catechol 2,3-dioxygenase (met	2e-04
d1ss4a_	149	d.32.1.6 (A:) Hypothetical protein BC1747 {Bacillu	2e-15
d1ss4a_	149	d.32.1.6 (A:) Hypothetical protein BC1747 {Bacillu	8e-05
d1jc4a_	145	d.32.1.4 (A:) Methylmalonyl-CoA epimerase {Propion	2e-15
d1t47a1	163	d.32.1.3 (A:16-178) 4-hydroxyphenylpyruvate dioxyg	8e-15
d1t47a1	163	d.32.1.3 (A:16-178) 4-hydroxyphenylpyruvate dioxyg	6e-04
d1f1ua1	146	d.32.1.3 (A:2-147) Homoprotocatechuate 2,3-dioxyge	2e-14
d1r9ca_	130	d.32.1.2 (A:) Fosfomycin resistance protein FosX {	4e-14
d1r9ca_	130	d.32.1.2 (A:) Fosfomycin resistance protein FosX {	7e-06
d1mpya1	145	d.32.1.3 (A:1-145) Catechol 2,3-dioxygenase (metap	5e-14
d1mpya1	145	d.32.1.3 (A:1-145) Catechol 2,3-dioxygenase (metap	1e-04
d1f1ua2	176	d.32.1.3 (A:148-323) Homoprotocatechuate 2,3-dioxy	4e-12
d1f1ua2	176	d.32.1.3 (A:148-323) Homoprotocatechuate 2,3-dioxy	3e-04
d1nkia_	134	d.32.1.2 (A:) Fosfomycin resistance protein A (Fos	1e-11
d2pjsa1	111	d.32.1.2 (A:3-113) Uncharacterized protein Atu1953	4e-11
d1zswa2	170	d.32.1.10 (A:145-314) Hypothetical protein BC1024	6e-11
d1npba_	140	d.32.1.2 (A:) Fosfomycin resistance protein A (Fos	1e-10
d1npba_	140	d.32.1.2 (A:) Fosfomycin resistance protein A (Fos	0.002
d1xqaa_	113	d.32.1.2 (A:) Hypothetical protein BC3580 {Bacillu	2e-10
d1xqaa_	113	d.32.1.2 (A:) Hypothetical protein BC3580 {Bacillu	0.002
d1xrka_	120	d.32.1.2 (A:) Bleomycin resistance protein, BRP {S	2e-10
d1xrka_	120	d.32.1.2 (A:) Bleomycin resistance protein, BRP {S	9e-04
d1lgta1	131	d.32.1.3 (A:2-132) 2,3-Dihydroxybiphenyl dioxygena	2e-10
d1klla_	128	d.32.1.2 (A:) Mitomycin resistance protein D, MRD	8e-10
d2i7ra1	115	d.32.1.2 (A:1-115) Hypotheical protein SP0731 {Str	2e-09
d2i7ra1	115	d.32.1.2 (A:1-115) Hypotheical protein SP0731 {Str	0.002
d1kw3b1	132	d.32.1.3 (B:1-132) 2,3-Dihydroxybiphenyl dioxygena	1e-08
d1cjxa2	203	d.32.1.3 (A:154-356) 4-hydroxyphenylpyruvate dioxy	1e-08
d1xy7a_	135	d.32.1.9 (A:) Hypothetical protein At5g48480 {Thal	2e-08
d1sp8a2	224	d.32.1.3 (A:208-431) 4-hydroxyphenylpyruvate dioxy	4e-08
d1ecsa_	120	d.32.1.2 (A:) Bleomycin resistance protein, BRP {K	5e-08
d1jifa_	122	d.32.1.2 (A:) Bleomycin resistance protein, BRP {S	2e-07
d1kw3b2	156	d.32.1.3 (B:133-288) 2,3-Dihydroxybiphenyl dioxyge	4e-07
d1t47a2	199	d.32.1.3 (A:179-377) 4-hydroxyphenylpyruvate dioxy	2e-06
d1sqia2	210	d.32.1.3 (A:157-366) 4-hydroxyphenylpyruvate dioxy	2e-05
d1sqda2	230	d.32.1.3 (A:181-410) 4-hydroxyphenylpyruvate dioxy	6e-05
d1u6la_	137	d.32.1.7 (A:) Hypothetical protein PA1353 {Pseudom	7e-05
d1cjxa1	150	d.32.1.3 (A:4-153) 4-hydroxyphenylpyruvate dioxyge	2e-04

>d1f9za_ d.32.1.1 (A:) Glyoxalase I (lactoylglutathione lyase) {Escherichia coli [TaxId: 562]} Length = 135

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Glyoxalase I (lactoylglutathione lyase)
domain: Glyoxalase I (lactoylglutathione lyase)
species: Escherichia coli [TaxId: 562]

 Score =  105 bits (262), Expect = 7e-29
 Identities = 74/132 (56%), Positives = 93/132 (70%)

Query: 23  RFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNY 82
           R LH + RVGDL R+I FYT+  GMKLLR  + PE KYS AF+G+GPE    V+ELTYN+
Sbjct: 2   RLLHTMLRVGDLQRSIDFYTKVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNW 61

Query: 83  GVTSYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIF 142
           GV  Y++GT +GH A++ ++  +  E IR  GGNVTRE GP+KGGTT IAFV+DPDGY  
Sbjct: 62  GVDKYELGTAYGHIALSVDNAAEACEKIRQNGGNVTREAGPVKGGTTVIAFVEDPDGYKI 121

Query: 143 ELIQRGPTPEPL 154
           ELI+       L
Sbjct: 122 ELIEEKDAGRGL 133

>d1f9za_ d.32.1.1 (A:) Glyoxalase I (lactoylglutathione lyase) {Escherichia coli [TaxId: 562]} Length = 135

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Glyoxalase I (lactoylglutathione lyase)
domain: Glyoxalase I (lactoylglutathione lyase)
species: Escherichia coli [TaxId: 562]

 Score = 74.7 bits (182), Expect = 2e-17
 Identities = 63/132 (47%), Positives = 86/132 (65%), Gaps = 4/132 (3%)

Query: 157 VMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTE 216
            MLRVGDL RSI FY K LGMKLLRT + PEYKY+LA +GY  E +  V+ELTYN+GV +
Sbjct: 6   TMLRVGDLQRSIDFYTKVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNWGVDK 65

Query: 217 YTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKT 276
           Y  G AY  +A+S D+  ++ E +    ++ GG +TR+ G + G  T I    DPDG+K 
Sbjct: 66  YELGTAYGHIALSVDNAAEACEKI----RQNGGNVTREAGPVKGGTTVIAFVEDPDGYKI 121

Query: 277 VLVDNEDFLKEL 288
            L++ +D  + L
Sbjct: 122 ELIEEKDAGRGL 133

>d2c21a1 d.32.1.1 (A:3-141) Glyoxalase I (lactoylglutathione lyase) {Leishmania major [TaxId: 5664]} Length = 139

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Glyoxalase I (lactoylglutathione lyase)
domain: Glyoxalase I (lactoylglutathione lyase)
species: Leishmania major [TaxId: 5664]

 Score =  100 bits (249), Expect = 6e-27
 Identities = 70/132 (53%), Positives = 84/132 (63%), Gaps = 5/132 (3%)

Query: 22  RRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYN 81
           RR LH + RVGDLDR+IKFYTE  GMK+LRK DVPE+KY+  FLG+GPE S  V+ELTYN
Sbjct: 2   RRMLHTMIRVGDLDRSIKFYTERLGMKVLRKWDVPEDKYTLVFLGYGPEMSSTVLELTYN 61

Query: 82  YGVTSYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYI 141
           YGVTSY     +GH AI  EDV +LV ++R     +  E          +AFV DPDGY 
Sbjct: 62  YGVTSYKHDEAYGHIAIGVEDVKELVADMRKHDVPIDYEDES-----GFMAFVVDPDGYY 116

Query: 142 FELIQRGPTPEP 153
            EL+      E 
Sbjct: 117 IELLNEKTMMEK 128

>d2c21a1 d.32.1.1 (A:3-141) Glyoxalase I (lactoylglutathione lyase) {Leishmania major [TaxId: 5664]} Length = 139

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Glyoxalase I (lactoylglutathione lyase)
domain: Glyoxalase I (lactoylglutathione lyase)
species: Leishmania major [TaxId: 5664]

 Score = 63.5 bits (153), Expect = 3e-13
 Identities = 55/131 (41%), Positives = 75/131 (57%), Gaps = 9/131 (6%)

Query: 157 VMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTE 216
            M+RVGDL RSIKFY + LGMK+LR  D PE KYTL  LGY  E  +TVLELTYNYGVT 
Sbjct: 7   TMIRVGDLDRSIKFYTERLGMKVLRKWDVPEDKYTLVFLGYGPEMSSTVLELTYNYGVTS 66

Query: 217 YTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKT 276
           Y    AY  +AI  +DV +    +    ++    I  +       +  +   VDPDG+  
Sbjct: 67  YKHDEAYGHIAIGVEDVKELVADM----RKHDVPIDYEDE-----SGFMAFVVDPDGYYI 117

Query: 277 VLVDNEDFLKE 287
            L++ +  +++
Sbjct: 118 ELLNEKTMMEK 128

>d1qipa_ d.32.1.1 (A:) Glyoxalase I (lactoylglutathione lyase) {Human (Homo sapiens) [TaxId: 9606]} Length = 176

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Glyoxalase I (lactoylglutathione lyase)
domain: Glyoxalase I (lactoylglutathione lyase)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 97.4 bits (241), Expect = 3e-25
 Identities = 40/153 (26%), Positives = 61/153 (39%), Gaps = 26/153 (16%)

Query: 23  RFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVE----- 77
                + RV D  +++ FYT   GM L++K D P  K+S  FL +  +      +     
Sbjct: 23  LLQQTMLRVKDPKKSLDFYTRVLGMTLIQKCDFPIMKFSLYFLAYEDKNDIPKEKDEKIA 82

Query: 78  ----------LTYNYGVTSYD---------IGTGFGHFAIATEDVYKLVENIRAKGGNVT 118
                     LT+N+G    +            GFGH  IA  DVY   +     G    
Sbjct: 83  WALSRKATLELTHNWGTEDDETQSYHNGNSDPRGFGHIGIAVPDVYSACKRFEELGVKFV 142

Query: 119 REPGPLKGGTTHIAFVKDPDGYIFELIQRGPTP 151
           ++P    G    +AF++DPDGY  E++      
Sbjct: 143 KKPDD--GKMKGLAFIQDPDGYWIEILNPNKMA 173

>d1qipa_ d.32.1.1 (A:) Glyoxalase I (lactoylglutathione lyase) {Human (Homo sapiens) [TaxId: 9606]} Length = 176

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Glyoxalase I (lactoylglutathione lyase)
domain: Glyoxalase I (lactoylglutathione lyase)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 59.6 bits (143), Expect = 2e-11
 Identities = 37/146 (25%), Positives = 59/146 (40%), Gaps = 22/146 (15%)

Query: 154 LCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLE------ 207
           L Q MLRV D  +S+ FY + LGM L++  D P  K++L  L Y +++     +      
Sbjct: 24  LQQTMLRVKDPKKSLDFYTRVLGMTLIQKCDFPIMKFSLYFLAYEDKNDIPKEKDEKIAW 83

Query: 208 ---------LTYNYGV-----TEYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITR 253
                    LT+N+G        Y  GN+  +                   +ELG K  +
Sbjct: 84  ALSRKATLELTHNWGTEDDETQSYHNGNSDPRGFGHIGIAVPDVYSACKRFEELGVKFVK 143

Query: 254 QPGSIPGLNTKITSFVDPDGWKTVLV 279
           +P    G    +    DPDG+   ++
Sbjct: 144 KPD--DGKMKGLAFIQDPDGYWIEIL 167

>d1twua_ d.32.1.8 (A:) Hypothetical protein YycE {Bacillus subtilis [TaxId: 1423]} Length = 137

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Hypothetical protein YycE
domain: Hypothetical protein YycE
species: Bacillus subtilis [TaxId: 1423]

 Score = 74.9 bits (183), Expect = 2e-17
 Identities = 21/131 (16%), Positives = 35/131 (26%), Gaps = 8/131 (6%)

Query: 23  RFLHAVYRV----GDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVEL 78
            F  A  R+    G LD  I+FY E   +K +         Y     G      H     
Sbjct: 5   SFQAAQIRIARPTGQLDEIIRFYEEGLCLKRIG-EFSQHNGYDGVMFGLPHADYHLEFTQ 63

Query: 79  TYNYGVTSYDIGTGFGHFAIAT-EDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDP 137
                            F +    ++  +   ++  G        P          ++DP
Sbjct: 64  YEGGSTAPVPHPDSLLVFYVPNAVELAAITSKLKHMGYQEVESENPYWSN--GGVTIEDP 121

Query: 138 DGYIFELIQRG 148
           DG+    +   
Sbjct: 122 DGWRIVFMNSK 132

>d1twua_ d.32.1.8 (A:) Hypothetical protein YycE {Bacillus subtilis [TaxId: 1423]} Length = 137

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Hypothetical protein YycE
domain: Hypothetical protein YycE
species: Bacillus subtilis [TaxId: 1423]

 Score = 58.4 bits (140), Expect = 2e-11
 Identities = 17/133 (12%), Positives = 42/133 (31%), Gaps = 10/133 (7%)

Query: 154 LCQVMLRV----GDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELT 209
                +R+    G L   I+FYE+ L +K +    +      +       +      +  
Sbjct: 6   FQAAQIRIARPTGQLDEIIRFYEEGLCLKRIGEFSQHNGYDGVMFGLPHADYHLEFTQYE 65

Query: 210 YNYGVTEYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFV 269
                      +       +  ++      +    + +G +        P  +    +  
Sbjct: 66  GGSTAPVPHPDSLLVFYVPNAVELAAITSKL----KHMGYQEVESEN--PYWSNGGVTIE 119

Query: 270 DPDGWKTVLVDNE 282
           DPDGW+ V ++++
Sbjct: 120 DPDGWRIVFMNSK 132

>d1sqda1 d.32.1.3 (A:14-180) 4-hydroxyphenylpyruvate dioxygenase, HppD {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 167

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 75.6 bits (185), Expect = 2e-17
 Identities = 31/157 (19%), Positives = 48/157 (30%), Gaps = 27/157 (17%)

Query: 17  PKKDK---RRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSH 73
           PK DK   +RF H  +  GD     + ++   GM+   K D+      +A          
Sbjct: 3   PKSDKFKVKRFHHIEFWCGDATNVARRFSWGLGMRFSAKSDLSTGNMVHASYLLTSGDLR 62

Query: 74  FVVELTYNYGVTSYDIG-----------------------TGFGHFAIATEDVYKLVENI 110
           F+    Y+  +++ +I                         G    AI  ED        
Sbjct: 63  FLFTAPYSPSLSAGEIKPTTTASIPSFDHGSCRSFFSSHGLGVRAVAIEVEDAESAFSIS 122

Query: 111 RAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQR 147
            A G   +  P  L    T IA VK     +   +  
Sbjct: 123 VANGAIPSSPPIVLNEAVT-IAEVKLYGDVVLRYVSY 158

>d1sqda1 d.32.1.3 (A:14-180) 4-hydroxyphenylpyruvate dioxygenase, HppD {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 167

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 41.0 bits (95), Expect = 3e-05
 Identities = 16/127 (12%), Positives = 30/127 (23%), Gaps = 27/127 (21%)

Query: 157 VMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTE 216
           +    GD     + +   LGM+     D        A       D   +    Y+  ++ 
Sbjct: 16  IEFWCGDATNVARRFSWGLGMRFSAKSDLSTGNMVHASYLLTSGDLRFLFTAPYSPSLSA 75

Query: 217 -----------------------YTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITR 253
                                   + G     VAI  +D   +  +        G   + 
Sbjct: 76  GEIKPTTTASIPSFDHGSCRSFFSSHGLGVRAVAIEVEDAESAFSIS----VANGAIPSS 131

Query: 254 QPGSIPG 260
            P  +  
Sbjct: 132 PPIVLNE 138

>d1sqia1 d.32.1.3 (A:8-156) 4-hydroxyphenylpyruvate dioxygenase, HppD {Human (Homo sapiens) [TaxId: 9606]} Length = 149

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 74.9 bits (183), Expect = 3e-17
 Identities = 28/141 (19%), Positives = 48/141 (34%), Gaps = 10/141 (7%)

Query: 17  PKKDKRRFL---HAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSH 73
           PK ++ RFL      + VG+  +   FY    G + L  + +               +  
Sbjct: 2   PKPERGRFLHFHSVTFWVGNAKQAASFYCNKMGFEPLAYKGLETGSREVVSHVIKQGKIV 61

Query: 74  FVVELTYNYGVTSYDI-----GTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLK--G 126
           FV+    N             G G    A   ED   +V+  R +G  + REP   +   
Sbjct: 62  FVLCSALNPWNKEMGDHLVKHGDGVKDIAFEVEDCEHIVQKARERGAKIVREPWVEEDKF 121

Query: 127 GTTHIAFVKDPDGYIFELIQR 147
           G    A ++        L+++
Sbjct: 122 GKVKFAVLQTYGDTTHTLVEK 142

>d1sp8a1 d.32.1.3 (A:36-207) 4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Zea mays) [TaxId: 4577]} Length = 172

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Corn (Zea mays) [TaxId: 4577]

 Score = 74.9 bits (183), Expect = 5e-17
 Identities = 23/151 (15%), Positives = 39/151 (25%), Gaps = 21/151 (13%)

Query: 17  PKKDK---RRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSH 73
           P+ D+     F H      D       ++   G  L  + D+     ++A L        
Sbjct: 4   PRSDRFHTLAFHHVELWCADAASAAGRFSFGLGAPLAARSDLSTGNSAHASLLLRSGSLS 63

Query: 74  FVVELTYNYGVTSYDI-----------------GTGFGHFAIATEDVYKLVENIRAKGGN 116
           F+    Y +G  +                    G      A+   D         A G  
Sbjct: 64  FLFTAPYAHGADAATAALPSFSAAAARRFAADHGLAVRAVALRVADAEDAFRASVAAGAR 123

Query: 117 VTREPGPLKGGTTHIAFVKDPDGYIFELIQR 147
               P  L  G   +A V+     +   +  
Sbjct: 124 PAFGPVDLGRGFR-LAEVELYGDVVLRYVSY 153

>d1sp8a1 d.32.1.3 (A:36-207) 4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Zea mays) [TaxId: 4577]} Length = 172

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Corn (Zea mays) [TaxId: 4577]

 Score = 37.5 bits (86), Expect = 6e-04
 Identities = 17/117 (14%), Positives = 25/117 (21%), Gaps = 13/117 (11%)

Query: 157 VMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTE 216
           V L   D   +   +   LG  L    D        A L       + +    Y +G   
Sbjct: 17  VELWCADAASAAGRFSFGLGAPLAARSDLSTGNSAHASLLLRSGSLSFLFTAPYAHGADA 76

Query: 217 YTKGNAYAQVAISTDDVYKSAEVVNLVT-------------QELGGKITRQPGSIPG 260
            T        A +          V  V                 G +    P  +  
Sbjct: 77  ATAALPSFSAAAARRFAADHGLAVRAVALRVADAEDAFRASVAAGARPAFGPVDLGR 133

>d1zswa1 d.32.1.10 (A:1-144) Hypothetical protein BC1024 {Bacillus cereus [TaxId: 1396]} Length = 144

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: BC1024-like
domain: Hypothetical protein BC1024
species: Bacillus cereus [TaxId: 1396]

 Score = 72.0 bits (175), Expect = 3e-16
 Identities = 10/134 (7%), Positives = 27/134 (20%), Gaps = 2/134 (1%)

Query: 22  RRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYN 81
           +   H      + +    FY    G++ ++     ++             S       + 
Sbjct: 5   KGHHHISMVTKNANENNHFYKNVLGLRRVKMTVNQDDPSMYHLFYGDKTGSPGTELSFFE 64

Query: 82  YGVT--SYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDG 139
             +   +Y          +       L            +               +D +G
Sbjct: 65  IPLVGRTYRGTNAITRIGLLVPSEDSLHYWKERFEKFDVKHSEMTTYANRPALQFEDAEG 124

Query: 140 YIFELIQRGPTPEP 153
               L+        
Sbjct: 125 LRLVLLVSNGEKVE 138

>d1zswa1 d.32.1.10 (A:1-144) Hypothetical protein BC1024 {Bacillus cereus [TaxId: 1396]} Length = 144

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: BC1024-like
domain: Hypothetical protein BC1024
species: Bacillus cereus [TaxId: 1396]

 Score = 45.4 bits (106), Expect = 9e-07
 Identities = 14/129 (10%), Positives = 35/129 (27%), Gaps = 6/129 (4%)

Query: 157 VMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAML--GYAEEDQTTVLELTYNYGV 214
           + +   +   +  FY+  LG++ ++     +      +          T +         
Sbjct: 10  ISMVTKNANENNHFYKNVLGLRRVKMTVNQDDPSMYHLFYGDKTGSPGTELSFFEIPLVG 69

Query: 215 TEYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGW 274
             Y   NA  ++ +                 E       +  +          F D +G 
Sbjct: 70  RTYRGTNAITRIGLLVPSEDSLHYWKE--RFEKFDVKHSEMTTYAN--RPALQFEDAEGL 125

Query: 275 KTVLVDNED 283
           + VL+ +  
Sbjct: 126 RLVLLVSNG 134

>d1mpya2 d.32.1.3 (A:146-307) Catechol 2,3-dioxygenase (metapyrocatechase) {Pseudomonas putida, mt2 [TaxId: 303]} Length = 162

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Catechol 2,3-dioxygenase (metapyrocatechase)
species: Pseudomonas putida, mt2 [TaxId: 303]

 Score = 70.7 bits (172), Expect = 1e-15
 Identities = 26/157 (16%), Positives = 48/157 (30%), Gaps = 12/157 (7%)

Query: 23  RFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNY 82
           RF HA+    +L  T   +T+  G  L  +                  Q   +    ++ 
Sbjct: 5   RFDHALMYGDELPATYDLFTKVLGFYLAEQVLDENGTR--------VAQFLSLSTKAHDV 56

Query: 83  GVTSYDIGTGFGHFAIATEDVYKLVEN---IRAKGGNVTREPGPLKGGTTHIAFVKDPDG 139
               +       H +   E    L+     I     ++   P           +  DP G
Sbjct: 57  AFIHHPEKGRLHHVSFHLETWEDLLRAADLISMTDTSIDIGPTRHGLTHGKTIYFFDPSG 116

Query: 140 YIFELIQRGPTPEPLCQ-VMLRVGDLGRSIKFYEKAL 175
              E+   G    P  + V      LG++I ++++ L
Sbjct: 117 NRNEVFCGGDYNYPDHKPVTWTTDQLGKAIFYHDRIL 153

>d1mpya2 d.32.1.3 (A:146-307) Catechol 2,3-dioxygenase (metapyrocatechase) {Pseudomonas putida, mt2 [TaxId: 303]} Length = 162

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Catechol 2,3-dioxygenase (metapyrocatechase)
species: Pseudomonas putida, mt2 [TaxId: 303]

 Score = 38.8 bits (89), Expect = 2e-04
 Identities = 16/117 (13%), Positives = 27/117 (23%), Gaps = 9/117 (7%)

Query: 157 VMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTE 216
            ++   +L  +   + K LG  L   V           L  + +            G   
Sbjct: 9   ALMYGDELPATYDLFTKVLGFYLAEQVLDENGTRVAQFLSLSTKAHDVAFIHHPEKGRLH 68

Query: 217 YTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDG 273
           +   +      +       S              I   P      + K   F DP G
Sbjct: 69  HVSFHLETWEDLLRAADLISMT---------DTSIDIGPTRHGLTHGKTIYFFDPSG 116

>d1ss4a_ d.32.1.6 (A:) Hypothetical protein BC1747 {Bacillus cereus (strain ATCC 14579 / DSM 31) [TaxId: 226900]} Length = 149

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Hypothetical protein BC1747
domain: Hypothetical protein BC1747
species: Bacillus cereus (strain ATCC 14579 / DSM 31) [TaxId: 226900]

 Score = 69.7 bits (169), Expect = 2e-15
 Identities = 20/140 (14%), Positives = 39/140 (27%), Gaps = 16/140 (11%)

Query: 23  RFLHAVYRVGDLDRTIKFYTECFGMKLLRK--------RDVPEEKYSNAFLGFGPEQSHF 74
           R  +    V  LD  I F+ E       R         R                   H 
Sbjct: 9   RMDNVSIVVESLDNAISFFEEIGLNLEGRANVEGEWAGRVTGLGSQCVEIAMMVTPDGHS 68

Query: 75  VVELTYNYGVTS-------YDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGG 127
            +EL+      +            G+       ED+ ++V  +   G  +  E    +  
Sbjct: 69  RIELSRFLTPPTIADHRTAPVNALGYLRVMFTVEDIDEMVSRLTKHGAELVGEVVQYENS 128

Query: 128 TTHIAFVKDPDGYIFELIQR 147
              + +++  +G +  L + 
Sbjct: 129 Y-RLCYIRGVEGILIGLAEE 147

>d1ss4a_ d.32.1.6 (A:) Hypothetical protein BC1747 {Bacillus cereus (strain ATCC 14579 / DSM 31) [TaxId: 226900]} Length = 149

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Hypothetical protein BC1747
domain: Hypothetical protein BC1747
species: Bacillus cereus (strain ATCC 14579 / DSM 31) [TaxId: 226900]

 Score = 40.0 bits (92), Expect = 8e-05
 Identities = 17/128 (13%), Positives = 40/128 (31%), Gaps = 12/128 (9%)

Query: 157 VMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYT--------LAMLGYAEEDQTTVLEL 208
           V + V  L  +I F+E+       R   + E+           + +      D  + +EL
Sbjct: 13  VSIVVESLDNAISFFEEIGLNLEGRANVEGEWAGRVTGLGSQCVEIAMMVTPDGHSRIEL 72

Query: 209 TYNYGVTEYTKGNAYAQVAISTDDVYKSAEVVNLVTQEL---GGKITRQPGSIPGLNTKI 265
           +                 A+    V  + E ++ +   L   G ++  +       + ++
Sbjct: 73  SRFLTPPTIADHRTAPVNALGYLRVMFTVEDIDEMVSRLTKHGAELVGEVVQYEN-SYRL 131

Query: 266 TSFVDPDG 273
                 +G
Sbjct: 132 CYIRGVEG 139

>d1jc4a_ d.32.1.4 (A:) Methylmalonyl-CoA epimerase {Propionibacterium shermanii [TaxId: 1752]} Length = 145

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Methylmalonyl-CoA epimerase
domain: Methylmalonyl-CoA epimerase
species: Propionibacterium shermanii [TaxId: 1752]

 Score = 69.6 bits (169), Expect = 2e-15
 Identities = 28/133 (21%), Positives = 49/133 (36%), Gaps = 12/133 (9%)

Query: 26  HAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVV--ELTYNYG 83
           H  Y   D D   K+Y E FG   L + + PE+      +    + +  +   ++     
Sbjct: 10  HVAYACPDADEASKYYQETFGWHELHREENPEQGVVEIMMAPAAKLTEHMTQVQVMAPLN 69

Query: 84  VTS--------YDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFV- 134
             S        ++   G  H A   +D+  +   +R +G  +  +   L  G   I F+ 
Sbjct: 70  DESTVAKWLAKHNGRAGLHHMAWRVDDIDAVSATLRERGVQLLYDEPKLGTGGNRINFMH 129

Query: 135 -KDPDGYIFELIQ 146
            K   G + EL Q
Sbjct: 130 PKSGKGVLIELTQ 142

>d1t47a1 d.32.1.3 (A:16-178) 4-hydroxyphenylpyruvate dioxygenase, HppD {Streptomyces avermitilis [TaxId: 33903]} Length = 163

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Streptomyces avermitilis [TaxId: 33903]

 Score = 68.3 bits (166), Expect = 8e-15
 Identities = 26/136 (19%), Positives = 39/136 (28%), Gaps = 10/136 (7%)

Query: 22  RRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYN 81
           +     V+ VG+  +   +Y+  FGM+L+            A        + FV+     
Sbjct: 6   KGMDAVVFAVGNAKQAAHYYSTAFGMQLVAYSGPENGSRETASYVLTNGSARFVLTSVIK 65

Query: 82  YGVTSYDI--------GTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLK--GGTTHI 131
                           G G    AI   D           G     EP  LK   GT  +
Sbjct: 66  PATPWGHFLADHVAEHGDGVVDLAIEVPDARAAHAYAIEHGARSVAEPYELKDEHGTVVL 125

Query: 132 AFVKDPDGYIFELIQR 147
           A +         L+ R
Sbjct: 126 AAIATYGKTRHTLVDR 141

>d1t47a1 d.32.1.3 (A:16-178) 4-hydroxyphenylpyruvate dioxygenase, HppD {Streptomyces avermitilis [TaxId: 33903]} Length = 163

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Streptomyces avermitilis [TaxId: 33903]

 Score = 37.5 bits (86), Expect = 6e-04
 Identities = 11/69 (15%), Positives = 19/69 (27%)

Query: 157 VMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTE 216
           V+  VG+  ++  +Y  A GM+L+            A           VL          
Sbjct: 11  VVFAVGNAKQAAHYYSTAFGMQLVAYSGPENGSRETASYVLTNGSARFVLTSVIKPATPW 70

Query: 217 YTKGNAYAQ 225
                 +  
Sbjct: 71  GHFLADHVA 79

>d1f1ua1 d.32.1.3 (A:2-147) Homoprotocatechuate 2,3-dioxygenase {Arthrobacter globiformis [TaxId: 1665]} Length = 146

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Homoprotocatechuate 2,3-dioxygenase
species: Arthrobacter globiformis [TaxId: 1665]

 Score = 67.0 bits (162), Expect = 2e-14
 Identities = 25/143 (17%), Positives = 43/143 (30%), Gaps = 16/143 (11%)

Query: 17  PKKDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVV 76
           P  D  R  +    V DL ++ +FY +  G+ +  + +                    + 
Sbjct: 10  PAPDIVRCAYMEIVVTDLAKSREFYVDVLGLHVTEEDE-------------NTIYLRSLE 56

Query: 77  ELTYNYGVTSYDIGTGFGHFAIATE---DVYKLVENIRAKGGNVTREPGPLKGGTTHIAF 133
           E  ++  V           FA   +   +V       +  G    R       G      
Sbjct: 57  EFIHHNLVLRQGPIAAVAAFAYRVKSPAEVDAAEAYYKELGCRTERRKEGFTKGIGDSVR 116

Query: 134 VKDPDGYIFELIQRGPTPEPLCQ 156
           V+DP G+ +E        E L Q
Sbjct: 117 VEDPLGFPYEFFYETEHVERLTQ 139

>d1r9ca_ d.32.1.2 (A:) Fosfomycin resistance protein FosX {Mesorhizobium loti [TaxId: 381]} Length = 130

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Fosfomycin resistance protein FosX
species: Mesorhizobium loti [TaxId: 381]

 Score = 65.7 bits (159), Expect = 4e-14
 Identities = 23/124 (18%), Positives = 41/124 (33%), Gaps = 8/124 (6%)

Query: 22  RRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSN-AFLGFGPEQSHFVVELTY 80
               H  + V DL+R  +     F  + +   D  +   S   F   G       + +  
Sbjct: 3   EGLSHMTFIVRDLERMTRILEGVFDAREVYASDTEQFSLSREKFFLIGD------IWVAI 56

Query: 81  NYGVTSYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGY 140
             G    +       F I   D  +  E +   G ++      ++G    I +  D D +
Sbjct: 57  MQGEKLAERSYNHIAFKIDDADFDRYAERVGKLGLDMRPPRPRVEGEGRSI-YFYDDDNH 115

Query: 141 IFEL 144
           +FEL
Sbjct: 116 MFEL 119

>d1r9ca_ d.32.1.2 (A:) Fosfomycin resistance protein FosX {Mesorhizobium loti [TaxId: 381]} Length = 130

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Fosfomycin resistance protein FosX
species: Mesorhizobium loti [TaxId: 381]

 Score = 42.6 bits (99), Expect = 7e-06
 Identities = 19/117 (16%), Positives = 35/117 (29%), Gaps = 10/117 (8%)

Query: 157 VMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTE 216
           +   V DL R  +  E     + +   D  ++  +        +     + +    G  E
Sbjct: 8   MTFIVRDLERMTRILEGVFDAREVYASDTEQFSLSREKFFLIGD-----IWVAIMQG--E 60

Query: 217 YTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDG 273
                +Y  +A   DD         +   +LG  +      + G    I  F D D 
Sbjct: 61  KLAERSYNHIAFKIDDADFDRYAERV--GKLGLDMRPPRPRVEGEGRSIY-FYDDDN 114

>d1mpya1 d.32.1.3 (A:1-145) Catechol 2,3-dioxygenase (metapyrocatechase) {Pseudomonas putida, mt2 [TaxId: 303]} Length = 145

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Catechol 2,3-dioxygenase (metapyrocatechase)
species: Pseudomonas putida, mt2 [TaxId: 303]

 Score = 65.8 bits (159), Expect = 5e-14
 Identities = 21/129 (16%), Positives = 38/129 (29%), Gaps = 9/129 (6%)

Query: 18  KKDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVE 77
            K   R  H   RV D+ + ++ Y E  G+  + + D                      +
Sbjct: 2   NKGVMRPGHVQLRVLDMSKALEHYVELLGLIEMDRDDQGRVYLKAWTEVDKFSLVLREAD 61

Query: 78  LTYNYGVTSYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDP 137
                           G   +  + + +L  ++ A G  V + P             + P
Sbjct: 62  EPGMD---------FMGFKVVDEDALRQLERDLMAYGCAVEQLPAGELNSCGRRVRFQAP 112

Query: 138 DGYIFELIQ 146
            G+ FEL  
Sbjct: 113 SGHHFELYA 121

>d1mpya1 d.32.1.3 (A:1-145) Catechol 2,3-dioxygenase (metapyrocatechase) {Pseudomonas putida, mt2 [TaxId: 303]} Length = 145

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Catechol 2,3-dioxygenase (metapyrocatechase)
species: Pseudomonas putida, mt2 [TaxId: 303]

 Score = 39.2 bits (90), Expect = 1e-04
 Identities = 15/117 (12%), Positives = 34/117 (29%), Gaps = 13/117 (11%)

Query: 157 VMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTE 216
           V LRV D+ ++++ Y + LG+  +   D+                       +      +
Sbjct: 11  VQLRVLDMSKALEHYVELLGLIEMDRDDQGRVYLKAWTEVDKF---------SLVLREAD 61

Query: 217 YTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDG 273
               +      +  D + +    +       G  + + P        +   F  P G
Sbjct: 62  EPGMDFMGFKVVDEDALRQLERDL----MAYGCAVEQLPAGELNSCGRRVRFQAPSG 114

>d1f1ua2 d.32.1.3 (A:148-323) Homoprotocatechuate 2,3-dioxygenase {Arthrobacter globiformis [TaxId: 1665]} Length = 176

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Homoprotocatechuate 2,3-dioxygenase
species: Arthrobacter globiformis [TaxId: 1665]

 Score = 61.4 bits (148), Expect = 4e-12
 Identities = 21/124 (16%), Positives = 39/124 (31%), Gaps = 9/124 (7%)

Query: 23  RFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNY 82
           R  H      D+ R   +  E  G ++       +     A++          +      
Sbjct: 5   RLDHFNQVTPDVPRGRAYL-EDLGFRVSEDIKDSDGVTYAAWMHRKQTVHDTALTGGNGP 63

Query: 83  GVTSYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAF--VKDPDGY 140
            +      T   H  I   D       + A   +   E GP + G ++  +  + DPDG+
Sbjct: 64  RMHHVAFATHEKHNIIQICD------KMGALRISDRIERGPGRHGVSNAFYLYILDPDGH 117

Query: 141 IFEL 144
             E+
Sbjct: 118 RIEI 121

>d1f1ua2 d.32.1.3 (A:148-323) Homoprotocatechuate 2,3-dioxygenase {Arthrobacter globiformis [TaxId: 1665]} Length = 176

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Homoprotocatechuate 2,3-dioxygenase
species: Arthrobacter globiformis [TaxId: 1665]

 Score = 38.7 bits (89), Expect = 3e-04
 Identities = 19/118 (16%), Positives = 32/118 (27%), Gaps = 9/118 (7%)

Query: 157 VMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTE 216
                 D+ R   + E  LG ++   +   +     A +   +    T L       +  
Sbjct: 9   FNQVTPDVPRGRAYLE-DLGFRVSEDIKDSDGVTYAAWMHRKQTVHDTALTGGNGPRMHH 67

Query: 217 YTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGW 274
                      I   D   +  +          +I R PG     N      +DPDG 
Sbjct: 68  VAFATHEKHNIIQICDKMGALRI--------SDRIERGPGRHGVSNAFYLYILDPDGH 117

>d1nkia_ d.32.1.2 (A:) Fosfomycin resistance protein A (FosA) {Pseudomonas aeruginosa [TaxId: 287]} Length = 134

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Fosfomycin resistance protein A (FosA)
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 58.7 bits (141), Expect = 1e-11
 Identities = 24/123 (19%), Positives = 34/123 (27%), Gaps = 14/123 (11%)

Query: 22  RRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYN 81
               H    V DL  +I FY +  G +L             A+L  G             
Sbjct: 3   TGLNHLTLAVADLPASIAFYRDLLGFRLEA------RWDQGAYLELGSLWLCLS----RE 52

Query: 82  YGVTSYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYI 141
                         F IA  D  +    +RA G    ++            +  DPDG+ 
Sbjct: 53  PQYGGPAADYTHYAFGIAAADFARFAAQLRAHGVREWKQNRS----EGDSFYFLDPDGHR 108

Query: 142 FEL 144
            E 
Sbjct: 109 LEA 111

>d2pjsa1 d.32.1.2 (A:3-113) Uncharacterized protein Atu1953 {Agrobacterium tumefaciens [TaxId: 358]} Length = 111

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Uncharacterized protein Atu1953
species: Agrobacterium tumefaciens [TaxId: 358]

 Score = 56.9 bits (136), Expect = 4e-11
 Identities = 19/124 (15%), Positives = 40/124 (32%), Gaps = 14/124 (11%)

Query: 22  RRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYN 81
           RR + A     +  R   FY +  GM              + ++           ++++ 
Sbjct: 2   RR-VVANIATPEPARAQAFYGDILGM---------PVAMDHGWIVTHASPLEAHAQVSFA 51

Query: 82  YGVTSYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYI 141
                   GT     +I  ++  ++   I   G  +   P     G     F++DP G +
Sbjct: 52  RE---GGSGTDVPDLSIEVDNFDEVHARILKAGLPIEYGPVTEAWG-VQRLFLRDPFGKL 107

Query: 142 FELI 145
             ++
Sbjct: 108 INIL 111

>d1zswa2 d.32.1.10 (A:145-314) Hypothetical protein BC1024 {Bacillus cereus [TaxId: 1396]} Length = 170

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: BC1024-like
domain: Hypothetical protein BC1024
species: Bacillus cereus [TaxId: 1396]

 Score = 57.8 bits (139), Expect = 6e-11
 Identities = 23/131 (17%), Positives = 45/131 (34%), Gaps = 12/131 (9%)

Query: 22  RRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYN 81
           +        V  LD+     TE FG   + + D        A       ++   + + Y 
Sbjct: 11  QGMGSVELTVRRLDKMASTLTEIFGYTEVSRNDQ------EAIFQSIKGEAFGEIVVKYL 64

Query: 82  YGVTSYDIGTGFGHFAIAT---EDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPD 138
            G T         H AI      ++    E ++ +G + +   G +        + ++ +
Sbjct: 65  DGPTEKPGRGSIHHLAIRVKNDAELAYWEEQVKQRGFHSS---GIIDRFYFKSLYFRESN 121

Query: 139 GYIFELIQRGP 149
           G +FE+   GP
Sbjct: 122 GILFEIATDGP 132

>d1npba_ d.32.1.2 (A:) Fosfomycin resistance protein A (FosA) {Serratia marcescens [TaxId: 615]} Length = 140

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Fosfomycin resistance protein A (FosA)
species: Serratia marcescens [TaxId: 615]

 Score = 56.6 bits (135), Expect = 1e-10
 Identities = 20/119 (16%), Positives = 39/119 (32%), Gaps = 11/119 (9%)

Query: 26  HAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVT 85
           H    V DL +++ F+ E  G+           +++        +    +        V 
Sbjct: 7   HLTLAVSDLQKSVTFWHELLGLT-------LHARWNTGAYLTCGDLWVCLSYDEARQYVP 59

Query: 86  SYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFEL 144
             +       F +A ED   L + +   G  + ++            +  DPDG+  EL
Sbjct: 60  PQESDYTHYAFTVAEEDFEPLSQRLEQAGVTIWKQNKS----EGASFYFLDPDGHKLEL 114

>d1npba_ d.32.1.2 (A:) Fosfomycin resistance protein A (FosA) {Serratia marcescens [TaxId: 615]} Length = 140

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Fosfomycin resistance protein A (FosA)
species: Serratia marcescens [TaxId: 615]

 Score = 35.4 bits (80), Expect = 0.002
 Identities = 9/25 (36%), Positives = 15/25 (60%)

Query: 157 VMLRVGDLGRSIKFYEKALGMKLLR 181
           + L V DL +S+ F+ + LG+ L  
Sbjct: 8   LTLAVSDLQKSVTFWHELLGLTLHA 32

>d1xqaa_ d.32.1.2 (A:) Hypothetical protein BC3580 {Bacillus cereus [TaxId: 1396]} Length = 113

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Hypothetical protein BC3580
species: Bacillus cereus [TaxId: 1396]

 Score = 55.1 bits (131), Expect = 2e-10
 Identities = 18/119 (15%), Positives = 34/119 (28%), Gaps = 13/119 (10%)

Query: 26  HAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVT 85
           H    V D+    +F  + FG+     R                  +   +         
Sbjct: 6   HLNLTVADVVAAREFLEKYFGLTCSGTRGNAFAVM---------RDNDGFILTLMKGKEV 56

Query: 86  SYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFEL 144
            Y      G    + E V K+ + ++  G  V            +  +V+ P G+  E+
Sbjct: 57  QYPKTFHVGFPQESEEQVDKINQRLKEDGFLVEPPK----HAHAYTFYVEAPGGFTIEV 111

>d1xqaa_ d.32.1.2 (A:) Hypothetical protein BC3580 {Bacillus cereus [TaxId: 1396]} Length = 113

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Hypothetical protein BC3580
species: Bacillus cereus [TaxId: 1396]

 Score = 34.7 bits (78), Expect = 0.002
 Identities = 7/24 (29%), Positives = 12/24 (50%)

Query: 157 VMLRVGDLGRSIKFYEKALGMKLL 180
           + L V D+  + +F EK  G+   
Sbjct: 7   LNLTVADVVAAREFLEKYFGLTCS 30

>d1xrka_ d.32.1.2 (A:) Bleomycin resistance protein, BRP {Streptoalloteichus hindustanus [TaxId: 2017]} Length = 120

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Bleomycin resistance protein, BRP
species: Streptoalloteichus hindustanus [TaxId: 2017]

 Score = 55.4 bits (132), Expect = 2e-10
 Identities = 17/122 (13%), Positives = 30/122 (24%), Gaps = 8/122 (6%)

Query: 25  LHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGV 84
              V    D+   ++F+T+  G   +   D        A +                   
Sbjct: 6   AVPVLTARDVAEAVEFWTDRLGFSRVFVED------DFAGVVRDDVTLFISAVQDQVVPD 59

Query: 85  TSYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFEL 144
            +       G   +  E    +  N R   G    E      G      ++DP G     
Sbjct: 60  NTQAWVWVRGLDELYAEWSEVVSTNFRDASGPAMTEIVEQPWGRE--FALRDPAGNCVHF 117

Query: 145 IQ 146
           + 
Sbjct: 118 VA 119

>d1xrka_ d.32.1.2 (A:) Bleomycin resistance protein, BRP {Streptoalloteichus hindustanus [TaxId: 2017]} Length = 120

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Bleomycin resistance protein, BRP
species: Streptoalloteichus hindustanus [TaxId: 2017]

 Score = 36.1 bits (82), Expect = 9e-04
 Identities = 12/116 (10%), Positives = 27/116 (23%), Gaps = 12/116 (10%)

Query: 158 MLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEY 217
           +L   D+  +++F+   LG   +   D              +                  
Sbjct: 9   VLTARDVAEAVEFWTDRLGFSRVFVEDDFAGVV------RDDVTLFISAVQDQVVPDNTQ 62

Query: 218 TKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDG 273
                     +  +     +      +     +I  QP        +  +  DP G
Sbjct: 63  AWVWVRGLDELYAEWSEVVSTNFRDASGPAMTEIVEQPWG------REFALRDPAG 112

>d1lgta1 d.32.1.3 (A:2-132) 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme) {Burkholderia cepacia, formerly Pseudomonas cepacia [TaxId: 292]} Length = 131

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme)
species: Burkholderia cepacia, formerly Pseudomonas cepacia [TaxId: 292]

 Score = 55.3 bits (132), Expect = 2e-10
 Identities = 20/125 (16%), Positives = 34/125 (27%), Gaps = 14/125 (11%)

Query: 22  RRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYN 81
           R   +  + V D+     F T+  G+      D             G             
Sbjct: 3   RSLGYMGFAVSDVAAWRSFLTQKLGLMEAGTTD------------NGDLFRIDSRAWRIA 50

Query: 82  YGVTSYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKG--GTTHIAFVKDPDG 139
                 D     G+       + ++ + ++  G  VT     L    G T +    DP G
Sbjct: 51  VQQGEVDDLAFAGYEVADAAGLAQMADKLKQAGIAVTTGDASLARRRGVTGLITFADPFG 110

Query: 140 YIFEL 144
              E+
Sbjct: 111 LPLEI 115

>d1klla_ d.32.1.2 (A:) Mitomycin resistance protein D, MRD {Streptomyces lavendulae [TaxId: 1914]} Length = 128

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Mitomycin resistance protein D, MRD
species: Streptomyces lavendulae [TaxId: 1914]

 Score = 53.6 bits (127), Expect = 8e-10
 Identities = 23/130 (17%), Positives = 39/130 (30%), Gaps = 4/130 (3%)

Query: 23  RFLHAVYRVGDLDRTIKFYTEC-FGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYN 81
           R       V D+ ++++FY +    +          E   +  +    +    V      
Sbjct: 2   RISLFAVVVEDMAKSMEFYRKMGVEIPAEADSAPHTEAVLDGGIRLAWDTVETVRSYDPE 61

Query: 82  YGVTSYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYI 141
           +   +             T  V K    +   G     +P     G    A VKDPDG +
Sbjct: 62  WQAPTGGHRFAIAFEFPDTASVDKKYAELVDAGYEGHLKPWNAVWGQ-RYAIVKDPDGNV 120

Query: 142 FELIQRGPTP 151
            +L    P P
Sbjct: 121 VDLFA--PLP 128

>d2i7ra1 d.32.1.2 (A:1-115) Hypotheical protein SP0731 {Streptococcus pneumoniae [TaxId: 1313]} Length = 115

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Hypotheical protein SP0731
species: Streptococcus pneumoniae [TaxId: 1313]

 Score = 52.1 bits (124), Expect = 2e-09
 Identities = 19/121 (15%), Positives = 34/121 (28%), Gaps = 12/121 (9%)

Query: 26  HAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVT 85
                V ++ +           K              A            + L+ N+ V 
Sbjct: 5   QLDIIVSNVPQVCADLEHILDKKADY------ANDGFAQF----TIGSHCLMLSQNHLVP 54

Query: 86  SYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELI 145
             +  +G     I  EDV +  + +   G  V   P     GT     V+ P G + +  
Sbjct: 55  LENFQSGI-IIHIEVEDVDQNYKRLNELGIKVLHGPTVTDWGT-ESLLVQGPAGLVLDFY 112

Query: 146 Q 146
           +
Sbjct: 113 R 113

>d2i7ra1 d.32.1.2 (A:1-115) Hypotheical protein SP0731 {Streptococcus pneumoniae [TaxId: 1313]} Length = 115

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Hypotheical protein SP0731
species: Streptococcus pneumoniae [TaxId: 1313]

 Score = 35.6 bits (81), Expect = 0.002
 Identities = 16/118 (13%), Positives = 37/118 (31%), Gaps = 16/118 (13%)

Query: 156 QVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVT 215
           Q+ + V ++ +     E  L  K              A  G+A+    +   +     + 
Sbjct: 5   QLDIIVSNVPQVCADLEHILDKKADY-----------ANDGFAQFTIGSHCLMLSQNHLV 53

Query: 216 EYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDG 273
                 +   + I  +DV ++ + +N +  ++    T          T+      P G
Sbjct: 54  PLENFQSGIIIHIEVEDVDQNYKRLNELGIKVLHGPTVTDW-----GTESLLVQGPAG 106

>d1kw3b1 d.32.1.3 (B:1-132) 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme) {Pseudomonas sp. [TaxId: 306]} Length = 132

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme)
species: Pseudomonas sp. [TaxId: 306]

 Score = 50.4 bits (119), Expect = 1e-08
 Identities = 19/125 (15%), Positives = 34/125 (27%), Gaps = 14/125 (11%)

Query: 22  RRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYN 81
            R  +  + V D+     F T+  G+               A            V+    
Sbjct: 3   ERLGYLGFAVKDVPAWDHFLTKSVGLM------AAGSAGDAALYRADQRAWRIAVQ---- 52

Query: 82  YGVTSYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKG--GTTHIAFVKDPDG 139
                 D     G        + ++ + +R  G   TR    L        +  ++DP G
Sbjct: 53  --PGELDDLAYAGLEVDDAAALERMADKLRQAGVAFTRGDEALMQQRKVMGLLCLQDPFG 110

Query: 140 YIFEL 144
              E+
Sbjct: 111 LPLEI 115

>d1cjxa2 d.32.1.3 (A:154-356) 4-hydroxyphenylpyruvate dioxygenase, HppD {Pseudomonas fluorescens [TaxId: 294]} Length = 203

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Pseudomonas fluorescens [TaxId: 294]

 Score = 51.5 bits (123), Expect = 1e-08
 Identities = 21/136 (15%), Positives = 37/136 (27%), Gaps = 12/136 (8%)

Query: 22  RRFLHAVYRV--GDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELT 79
           +   H  + V  G +     FY + F  +  R  D+  E                 + L 
Sbjct: 4   KVIDHLTHNVYRGRMVYWANFYEKLFNFREARYFDIKGEYTGLTSKAMSAPDGMIRIPLN 63

Query: 80  YNYGVTSYDIG--------TGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHI 131
                 +  I          G  H A  T+D+ K  + ++  G      P         +
Sbjct: 64  EESSKGAGQIEEFLMQFNGEGIQHVAFLTDDLVKTWDALKKIGMRFMTAPPD--TYYEML 121

Query: 132 AFVKDPDGYIFELIQR 147
                  G   + +Q 
Sbjct: 122 EGRLPDHGEPVDQLQA 137

>d1xy7a_ d.32.1.9 (A:) Hypothetical protein At5g48480 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 135

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Hypothetical protein At5g48480
domain: Hypothetical protein At5g48480
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 49.9 bits (118), Expect = 2e-08
 Identities = 19/126 (15%), Positives = 33/126 (26%), Gaps = 9/126 (7%)

Query: 28  VYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSN-------AFLGFGPEQSHFVVELTY 80
           +     +   + FY   FG         P+ K          + L      S  V +++ 
Sbjct: 12  LVEAQKVGDAVTFYKSAFGAIESGHSLYPKRKLDQELPHVLSSELNLA-GSSFVVCDVSS 70

Query: 81  NYGVTSYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGY 140
             G ++         F + T+D    V      G                   V DP G 
Sbjct: 71  LPGFSTAKSEGSGVTFLLGTKDAEAAVAKAVDAGAVKVEVTEAEVELGFK-GKVTDPFGV 129

Query: 141 IFELIQ 146
            +   +
Sbjct: 130 TWIFAE 135

>d1sp8a2 d.32.1.3 (A:208-431) 4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Zea mays) [TaxId: 4577]} Length = 224

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Corn (Zea mays) [TaxId: 4577]

 Score = 50.5 bits (120), Expect = 4e-08
 Identities = 21/113 (18%), Positives = 38/113 (33%), Gaps = 13/113 (11%)

Query: 22  RRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRD-----VPEEKYSNAFLGFGPEQSHFVV 76
            RF H V  V +L     ++    G     +         E   ++  L    E     +
Sbjct: 8   SRFDHIVGNVPELAPAAAYFAGFTGFHEFAEFTTEDVGTAESGLNSMVLANNSENVLLPL 67

Query: 77  -ELTYNYGVTS-------YDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREP 121
            E  +     S       +  G G  H A+A++DV + +  ++A+      E 
Sbjct: 68  NEPVHGTKRRSQIQTFLDHHGGPGVQHMALASDDVLRTLREMQARSAMGGFEF 120

>d1ecsa_ d.32.1.2 (A:) Bleomycin resistance protein, BRP {Klebsiella pneumoniae [TaxId: 573]} Length = 120

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Bleomycin resistance protein, BRP
species: Klebsiella pneumoniae [TaxId: 573]

 Score = 48.4 bits (114), Expect = 5e-08
 Identities = 21/124 (16%), Positives = 34/124 (27%), Gaps = 20/124 (16%)

Query: 30  RVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDI 89
              D D T  FY    G  +              F   G         +   +     D 
Sbjct: 9   PSRDFDSTAAFYER-LGFGI-------------VFRDAGWMILQRGDLMLEFFAHPGLDP 54

Query: 90  GTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTH------IAFVKDPDGYIFE 143
              +    +  +D+ +     ++ G   T    P             +A + DPDG +  
Sbjct: 55  LASWFSCCLRLDDLAEFYRQCKSVGIQETSSGYPRIHAPELQGWGGTMAALVDPDGTLLR 114

Query: 144 LIQR 147
           LIQ 
Sbjct: 115 LIQN 118

>d1jifa_ d.32.1.2 (A:) Bleomycin resistance protein, BRP {Streptomyces verticillus [TaxId: 29309]} Length = 122

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Bleomycin resistance protein, BRP
species: Streptomyces verticillus [TaxId: 29309]

 Score = 46.6 bits (109), Expect = 2e-07
 Identities = 17/130 (13%), Positives = 29/130 (22%), Gaps = 22/130 (16%)

Query: 23  RFLHA--VYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTY 80
           +FL A  V    D+   + F+ +  G +                            ++  
Sbjct: 3   KFLGAVPVLTAVDVPANVSFWVDTLGFEKDFGDR--------------DFAGVRRGDIRL 48

Query: 81  NYGVTSYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTT------HIAFV 134
           +   T + I        I   D   L E           +                   V
Sbjct: 49  HISRTEHQIVADNTSAWIEVTDPDALHEEWARAVSTDYADTSGPAMTPVGESPAGREFAV 108

Query: 135 KDPDGYIFEL 144
           +DP G     
Sbjct: 109 RDPAGNCVHF 118

>d1kw3b2 d.32.1.3 (B:133-288) 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme) {Pseudomonas sp. [TaxId: 306]} Length = 156

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme)
species: Pseudomonas sp. [TaxId: 306]

 Score = 46.7 bits (110), Expect = 4e-07
 Identities = 23/119 (19%), Positives = 38/119 (31%), Gaps = 9/119 (7%)

Query: 26  HAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVT 85
           H V  V D  + + FYTE  G  L    D+     ++    F            +   + 
Sbjct: 13  HFVRCVPDTAKAMAFYTEVLGFVLSDIIDIQMGPETSVPAHF-----LHCNGRHHTIALA 67

Query: 86  SYDIGTGFGHFAIAT---EDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYI 141
           ++ I     HF +     +DV    + + A G   +   G      T   +   P   I
Sbjct: 68  AFPIPKRIHHFMLQANTIDDVGYAFDRLDAAGRITS-LLGRHTNDQTLSFYADTPSPMI 125

>d1t47a2 d.32.1.3 (A:179-377) 4-hydroxyphenylpyruvate dioxygenase, HppD {Streptomyces avermitilis [TaxId: 33903]} Length = 199

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Streptomyces avermitilis [TaxId: 33903]

 Score = 45.0 bits (106), Expect = 2e-06
 Identities = 18/108 (16%), Positives = 34/108 (31%), Gaps = 13/108 (12%)

Query: 26  HAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHF------VVELT 79
             V   G ++  + FY +  G   +++    +     + L               + E  
Sbjct: 12  GNVEL-GRMNEWVGFYNKVMGFTNMKEFVGDDIATEYSALMSKVVADGTLKVKFPINEPA 70

Query: 80  YNYGVT------SYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREP 121
                +       +  G G  H A+ T D+ + V  +RA G      P
Sbjct: 71  LAKKKSQIDEYLEFYGGAGVQHIALNTGDIVETVRTMRAAGVQFLDTP 118

>d1sqia2 d.32.1.3 (A:157-366) 4-hydroxyphenylpyruvate dioxygenase, HppD {Human (Homo sapiens) [TaxId: 9606]} Length = 210

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.7 bits (100), Expect = 2e-05
 Identities = 15/108 (13%), Positives = 35/108 (32%), Gaps = 13/108 (12%)

Query: 26  HAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSH-FVVELTYNYGV 84
                  +++   ++Y +          D  +     + L      ++   +++  N   
Sbjct: 30  GNQPD-QEMESASEWYLKNLQFHRFWSVDDTQVHTEYSSLRSIVVANYEESIKMPINEPA 88

Query: 85  T-----------SYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREP 121
                        Y+ G G  H A+ TED+   + ++R +G      P
Sbjct: 89  PGRKKSQIQEYVDYNGGAGVQHIALRTEDIITTIRHLRERGMEFLAVP 136

>d1sqda2 d.32.1.3 (A:181-410) 4-hydroxyphenylpyruvate dioxygenase, HppD {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 230

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 40.9 bits (95), Expect = 6e-05
 Identities = 16/102 (15%), Positives = 36/102 (35%), Gaps = 13/102 (12%)

Query: 26  HAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSH------FVVEL- 78
           HAV  V +L   + +     G     +    +   + + L      S+       + E  
Sbjct: 25  HAVGNVPELGPALTYVAGFTGFHQFAEFTADDVGTAESGLNSAVLASNDEMVLLPINEPV 84

Query: 79  ------TYNYGVTSYDIGTGFGHFAIATEDVYKLVENIRAKG 114
                 +       ++ G G  H A+ +ED+++ +  +R + 
Sbjct: 85  HGTKRKSQIQTYLEHNEGAGLQHLALMSEDIFRTLREMRKRS 126

>d1u6la_ d.32.1.7 (A:) Hypothetical protein PA1353 {Pseudomonas aeruginosa [TaxId: 287]} Length = 137

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: 3-demethylubiquinone-9 3-methyltransferase
domain: Hypothetical protein PA1353
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 39.7 bits (92), Expect = 7e-05
 Identities = 14/122 (11%), Positives = 36/122 (29%), Gaps = 10/122 (8%)

Query: 32  GDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGT 91
           G+       Y +  G  L       +            ++      +  ++ + + D   
Sbjct: 12  GNCREAFSCYHQHLGGTLEAMLPFGDSPECGDIPADWKDKIMHARLVVGSFALMASDNHP 71

Query: 92  GFGHFA---------IATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIF 142
            + +           + ++   + + N  A+GG+V    GP     +      D  G  +
Sbjct: 72  AYPYEGIKGCSISLNVDSKAEAERLFNALAEGGSVQMPLGPTFWAASF-GMFTDRFGVAW 130

Query: 143 EL 144
            +
Sbjct: 131 MV 132

>d1cjxa1 d.32.1.3 (A:4-153) 4-hydroxyphenylpyruvate dioxygenase, HppD {Pseudomonas fluorescens [TaxId: 294]} Length = 150

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Pseudomonas fluorescens [TaxId: 294]

 Score = 38.8 bits (90), Expect = 2e-04
 Identities = 15/138 (10%), Positives = 33/138 (23%), Gaps = 11/138 (7%)

Query: 22  RRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYN 81
             F    +           +        +    V   +  N  L +   + + ++    N
Sbjct: 8   MGFEFIEFASPTPGTLEPIFEI------MGFTKVATHRSKNVHL-YRQGEINLILNNEPN 60

Query: 82  YGVTSY--DIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDG 139
              + +  + G      A   +D  K        G               ++  +K   G
Sbjct: 61  SIASYFAAEHGPSVCGMAFRVKDSQKAYNRALELGAQPIHI--DTGPMELNLPAIKGIGG 118

Query: 140 YIFELIQRGPTPEPLCQV 157
               LI R      +  +
Sbjct: 119 APLYLIDRFGEGSSIYDI 136

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	291
d1f9za_	135	Glyoxalase I (lactoylglutathione lyase) {Escherich	99.86
d1f9za_	135	Glyoxalase I (lactoylglutathione lyase) {Escherich	99.84
d2i7ra1	115	Hypotheical protein SP0731 {Streptococcus pneumoni	99.83
d1ss4a_	149	Hypothetical protein BC1747 {Bacillus cereus (stra	99.83
d1zswa1	144	Hypothetical protein BC1024 {Bacillus cereus [TaxI	99.82
d2i7ra1	115	Hypotheical protein SP0731 {Streptococcus pneumoni	99.81
d1mpya2	162	Catechol 2,3-dioxygenase (metapyrocatechase) {Pseu	99.81
d1ss4a_	149	Hypothetical protein BC1747 {Bacillus cereus (stra	99.8
d1jc4a_	145	Methylmalonyl-CoA epimerase {Propionibacterium she	99.79
d1r9ca_	130	Fosfomycin resistance protein FosX {Mesorhizobium	99.78
d1zswa1	144	Hypothetical protein BC1024 {Bacillus cereus [TaxI	99.77
d1mpya2	162	Catechol 2,3-dioxygenase (metapyrocatechase) {Pseu	99.77
d1f1ua1	146	Homoprotocatechuate 2,3-dioxygenase {Arthrobacter	99.77
d1twua_	137	Hypothetical protein YycE {Bacillus subtilis [TaxI	99.77
d1zswa2	170	Hypothetical protein BC1024 {Bacillus cereus [TaxI	99.77
d1qipa_	176	Glyoxalase I (lactoylglutathione lyase) {Human (Ho	99.77
d2c21a1	139	Glyoxalase I (lactoylglutathione lyase) {Leishmani	99.75
d1jc4a_	145	Methylmalonyl-CoA epimerase {Propionibacterium she	99.75
d1zswa2	170	Hypothetical protein BC1024 {Bacillus cereus [TaxI	99.75
d1sqia1	149	4-hydroxyphenylpyruvate dioxygenase, HppD {Human (	99.75
d1qipa_	176	Glyoxalase I (lactoylglutathione lyase) {Human (Ho	99.75
d1lgta1	131	2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzy	99.74
d1sqda1	167	4-hydroxyphenylpyruvate dioxygenase, HppD {Mouse-e	99.74
d1sqia1	149	4-hydroxyphenylpyruvate dioxygenase, HppD {Human (	99.74
d1xqaa_	113	Hypothetical protein BC3580 {Bacillus cereus [TaxI	99.73
d1xqaa_	113	Hypothetical protein BC3580 {Bacillus cereus [TaxI	99.73
d1nkia_	134	Fosfomycin resistance protein A (FosA) {Pseudomona	99.73
d1npba_	140	Fosfomycin resistance protein A (FosA) {Serratia m	99.73
d1t47a1	163	4-hydroxyphenylpyruvate dioxygenase, HppD {Strepto	99.73
d1mpya1	145	Catechol 2,3-dioxygenase (metapyrocatechase) {Pseu	99.73
d1f1ua2	176	Homoprotocatechuate 2,3-dioxygenase {Arthrobacter	99.72
d1f1ua1	146	Homoprotocatechuate 2,3-dioxygenase {Arthrobacter	99.72
d1kw3b1	132	2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzy	99.72
d2pjsa1	111	Uncharacterized protein Atu1953 {Agrobacterium tum	99.72
d1twua_	137	Hypothetical protein YycE {Bacillus subtilis [TaxI	99.72
d1r9ca_	130	Fosfomycin resistance protein FosX {Mesorhizobium	99.72
d2pjsa1	111	Uncharacterized protein Atu1953 {Agrobacterium tum	99.72
d1sp8a1	172	4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Z	99.71
d2c21a1	139	Glyoxalase I (lactoylglutathione lyase) {Leishmani	99.71
d1lgta1	131	2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzy	99.71
d1t47a1	163	4-hydroxyphenylpyruvate dioxygenase, HppD {Strepto	99.71
d1klla_	128	Mitomycin resistance protein D, MRD {Streptomyces	99.7
d1kw3b1	132	2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzy	99.7
d1klla_	128	Mitomycin resistance protein D, MRD {Streptomyces	99.69
d1f1ua2	176	Homoprotocatechuate 2,3-dioxygenase {Arthrobacter	99.69
d1mpya1	145	Catechol 2,3-dioxygenase (metapyrocatechase) {Pseu	99.69
d1npba_	140	Fosfomycin resistance protein A (FosA) {Serratia m	99.68
d1sp8a1	172	4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Z	99.67
d1sqda1	167	4-hydroxyphenylpyruvate dioxygenase, HppD {Mouse-e	99.66
d1nkia_	134	Fosfomycin resistance protein A (FosA) {Pseudomona	99.65
d1kw3b2	156	2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzy	99.64
d1kw3b2	156	2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzy	99.62
d1ecsa_	120	Bleomycin resistance protein, BRP {Klebsiella pneu	99.61
d1ecsa_	120	Bleomycin resistance protein, BRP {Klebsiella pneu	99.58
d1cjxa1	150	4-hydroxyphenylpyruvate dioxygenase, HppD {Pseudom	99.55
d1xy7a_	135	Hypothetical protein At5g48480 {Thale cress (Arabi	99.54
d1jifa_	122	Bleomycin resistance protein, BRP {Streptomyces ve	99.54
d1xy7a_	135	Hypothetical protein At5g48480 {Thale cress (Arabi	99.54
d1jifa_	122	Bleomycin resistance protein, BRP {Streptomyces ve	99.52
d1xrka_	120	Bleomycin resistance protein, BRP {Streptoalloteic	99.48
d1xrka_	120	Bleomycin resistance protein, BRP {Streptoalloteic	99.39
d1cjxa1	150	4-hydroxyphenylpyruvate dioxygenase, HppD {Pseudom	99.37
d1cjxa2	203	4-hydroxyphenylpyruvate dioxygenase, HppD {Pseudom	99.31
d1cjxa2	203	4-hydroxyphenylpyruvate dioxygenase, HppD {Pseudom	99.31
d1t47a2	199	4-hydroxyphenylpyruvate dioxygenase, HppD {Strepto	99.29
d1sqia2	210	4-hydroxyphenylpyruvate dioxygenase, HppD {Human (	99.27
d1sp8a2	224	4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Z	99.22
d1sqia2	210	4-hydroxyphenylpyruvate dioxygenase, HppD {Human (	99.2
d1t47a2	199	4-hydroxyphenylpyruvate dioxygenase, HppD {Strepto	99.19
d1u6la_	137	Hypothetical protein PA1353 {Pseudomonas aeruginos	99.17
d1sp8a2	224	4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Z	99.17
d1u6la_	137	Hypothetical protein PA1353 {Pseudomonas aeruginos	99.11
d1sqda2	230	4-hydroxyphenylpyruvate dioxygenase, HppD {Mouse-e	98.96
d1sqda2	230	4-hydroxyphenylpyruvate dioxygenase, HppD {Mouse-e	98.96
d1u7ia_	134	Hypothetical protein PA1358 {Pseudomonas aeruginos	98.84
d1u7ia_	134	Hypothetical protein PA1358 {Pseudomonas aeruginos	98.81
d1tsja_	129	Hypothetical protein MW1090 {Staphylococcus aureus	98.47
d1tsja_	129	Hypothetical protein MW1090 {Staphylococcus aureus	98.32
d1u69a_	156	Hypothetical protein PA2721 {Pseudomonas aeruginos	96.9
d1u69a_	156	Hypothetical protein PA2721 {Pseudomonas aeruginos	96.79

>d1f9za_ d.32.1.1 (A:) Glyoxalase I (lactoylglutathione lyase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Glyoxalase I (lactoylglutathione lyase)
domain: Glyoxalase I (lactoylglutathione lyase)
species: Escherichia coli [TaxId: 562]

Probab=99.86  E-value=9.1e-21  Score=138.93  Aligned_cols=133  Identities=48%  Similarity=0.834  Sum_probs=98.0

Q ss_pred             CCceEEEeeeCChhhhHHHHHHhcCCeeeeeeccCCccceEEEeccccCCceeEEEEeeecCcceeecCcceeEEEEEec
Q 022818          152 EPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTD  231 (291)
Q Consensus       152 ~~~~~v~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~hi~~~v~  231 (291)
                      +++.|+.|.|+|+++|.+||+++|||++...............+........................+.+..|+++.++
T Consensus         1 Mkl~Hv~i~V~Dl~~s~~FY~~iLG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (135)
T d1f9za_           1 MRLLHTMLRVGDLQRSIDFYTKVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNWGVDKYELGTAYGHIALSVD   80 (135)
T ss_dssp             CCEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEETTTTEEEEEEESSCTTTSCEEEEEEETTCCCCCCCSSEEEEEEECS
T ss_pred             CcceEEEEEcCCHHHHHHHHHHHhCCEEEeeccccccceeeeeeccceeeeccccccccccccccccccccceeeccchH
Confidence            57899999999999999999999999988776655554444444433332233333333333333344557899999999


Q ss_pred             chHHhHHHHHHHHHHhCCeeecCCccCCCCCceEEEEECCCCceEEEeechhhhhhh
Q 022818          232 DVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNEDFLKEL  288 (291)
Q Consensus       232 di~~~~~~l~~~~~~~G~~~~~~~~~~~~~~~~~~~~~DpdG~~iel~~~~~~~~~~  288 (291)
                      +++++.+++    +++|+.+..+|...++++.+++||+|||||+|||+|.++..+.+
T Consensus        81 ~~~~~~~~~----~~~g~~~~~~~~~~~~~~~~~~~~~DPdG~~iEl~q~~~~~~~~  133 (135)
T d1f9za_          81 NAAEACEKI----RQNGGNVTREAGPVKGGTTVIAFVEDPDGYKIELIEEKDAGRGL  133 (135)
T ss_dssp             CHHHHHHHH----HHTTCEEEEEEEECTTSCCEEEEEECTTSCEEEEEEC-------
T ss_pred             HHHHHHHHH----HHcCCCeecCCccccCCCeEEEEEECCCCCEEEEEECCCccccC
Confidence            999999999    99999999998888877778899999999999999998876654

>d1f9za_ d.32.1.1 (A:) Glyoxalase I (lactoylglutathione lyase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Glyoxalase I (lactoylglutathione lyase)
domain: Glyoxalase I (lactoylglutathione lyase)
species: Escherichia coli [TaxId: 562]

Probab=99.84  E-value=7e-20  Score=134.11  Aligned_cols=130  Identities=56%  Similarity=1.000  Sum_probs=98.1

Q ss_pred             eeeEEEEEEeCCHHHHHHHHHhhcCCEEEEEeecCCCceeEEEEecCCCCcceEEEeeecCCCCcccCCCCceEEEEEeC
Q 022818           22 RRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIATE  101 (291)
Q Consensus        22 ~~i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~~~~i~~~v~  101 (291)
                      |+|.|++|.|+|+++|.+||+++|||++..+............+........................+.+..|+++.++
T Consensus         1 Mkl~Hv~i~V~Dl~~s~~FY~~iLG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (135)
T d1f9za_           1 MRLLHTMLRVGDLQRSIDFYTKVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNWGVDKYELGTAYGHIALSVD   80 (135)
T ss_dssp             CCEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEETTTTEEEEEEESSCTTTSCEEEEEEETTCCCCCCCSSEEEEEEECS
T ss_pred             CcceEEEEEcCCHHHHHHHHHHHhCCEEEeeccccccceeeeeeccceeeeccccccccccccccccccccceeeccchH
Confidence            68999999999999999999999999998876655554444444433322333333333333333445567889999999


Q ss_pred             CHHHHHHHHHHcCCeeecCCeecCCCceEEEEEECCCCCEEEEEeCCCCC
Q 022818          102 DVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRGPTP  151 (291)
Q Consensus       102 d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~Dp~G~~iel~~~~~~~  151 (291)
                      +++++.++++++|..+...|...+++..+++||+|||||+|||++.++..
T Consensus        81 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~DPdG~~iEl~q~~~~~  130 (135)
T d1f9za_          81 NAAEACEKIRQNGGNVTREAGPVKGGTTVIAFVEDPDGYKIELIEEKDAG  130 (135)
T ss_dssp             CHHHHHHHHHHTTCEEEEEEEECTTSCCEEEEEECTTSCEEEEEEC----
T ss_pred             HHHHHHHHHHHcCCCeecCCccccCCCeEEEEEECCCCCEEEEEECCCcc
Confidence            99999999999999998888888877767789999999999999987543

>d2i7ra1 d.32.1.2 (A:1-115) Hypotheical protein SP0731 {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Hypotheical protein SP0731
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=99.83  E-value=4.4e-20  Score=131.67  Aligned_cols=114  Identities=18%  Similarity=0.137  Sum_probs=88.4

Q ss_pred             eeeEEEEEEeCCHHHHHHHHHhhcCCEEEEEeecCCCceeEEEEecCCCCcceEEEeeecCCCCcccCCCCceEEEEEeC
Q 022818           22 RRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIATE  101 (291)
Q Consensus        22 ~~i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~~~~i~~~v~  101 (291)
                      |+|+|+.|.|+|+++|++||+++||+++....+      ..+.+..++  .  .+.+...........+ ...+++|.|+
T Consensus         1 m~l~~i~i~V~di~~a~~FYe~~lg~~~~~~~~------~~~~~~~g~--~--~l~l~~~~~~~~~~~~-~~~~~~f~v~   69 (115)
T d2i7ra1           1 MNLNQLDIIVSNVPQVCADLEHILDKKADYAND------GFAQFTIGS--H--CLMLSQNHLVPLENFQ-SGIIIHIEVE   69 (115)
T ss_dssp             CEEEEEEEECSCHHHHHHHHHHHHTSCCSEEET------TEEEEEETT--E--EEEEESSCSSSCCCCC-SCEEEEEECS
T ss_pred             CcceEEEEEECCHHHHHHHHHHhhCCceeeecC------CeEEEEEcC--c--eeeeeecccCCCCCCC-cceEEEEEEC
Confidence            589999999999999999999999999866433      134566553  2  2334333322222222 3357999999


Q ss_pred             CHHHHHHHHHHcCCeeecCCeecCCCceEEEEEECCCCCEEEEEeC
Q 022818          102 DVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQR  147 (291)
Q Consensus       102 d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~Dp~G~~iel~~~  147 (291)
                      |+++++++|+++|+++..+|...++|.+. ++|+|||||+|||.+.
T Consensus        70 D~d~~~~~l~~~G~~i~~~~~~~~~g~~~-~~~~DPdGn~ie~~~~  114 (115)
T d2i7ra1          70 DVDQNYKRLNELGIKVLHGPTVTDWGTES-LLVQGPAGLVLDFYRM  114 (115)
T ss_dssp             CHHHHHHHHHHHTCCEEEEEEECTTSCEE-EEEECGGGCEEEEEEC
T ss_pred             CHHHHHHHHHhhccccccceEEeeCCeEE-EEEECCCCCEEEEEEe
Confidence            99999999999999999999999988765 8999999999999875

>d1ss4a_ d.32.1.6 (A:) Hypothetical protein BC1747 {Bacillus cereus (strain ATCC 14579 / DSM 31) [TaxId: 226900]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Hypothetical protein BC1747
domain: Hypothetical protein BC1747
species: Bacillus cereus (strain ATCC 14579 / DSM 31) [TaxId: 226900]

Probab=99.83  E-value=2.4e-19  Score=133.74  Aligned_cols=128  Identities=16%  Similarity=0.271  Sum_probs=94.1

Q ss_pred             CCcceeeEEEEEEeCCHHHHHHHHHhhcCCEEEEEeecC-----------CCceeEEEEecCCCCcceEE-EeeecCCCC
Q 022818           18 KKDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVP-----------EEKYSNAFLGFGPEQSHFVV-ELTYNYGVT   85 (291)
Q Consensus        18 ~~~~~~i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~l-~~~~~~~~~   85 (291)
                      +..+++|+|++|.|+|++++.+||++ |||++..+....           .......++...+......+ .........
T Consensus         4 ~~~~~ri~Hv~i~v~Dle~s~~FY~~-LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~   82 (149)
T d1ss4a_           4 KNKLLRMDNVSIVVESLDNAISFFEE-IGLNLEGRANVEGEWAGRVTGLGSQCVEIAMMVTPDGHSRIELSRFLTPPTIA   82 (149)
T ss_dssp             TCCEEEEEEEEEECSCHHHHHHHHHH-HTCEEEEEEEECSHHHHHHHSCCSCEEEEEEEECTTSSCEEEEEEEEESCCCC
T ss_pred             CCCCCEEeEEEEEeCCHHHHHHHHHH-cCCcEeeeeccceeeeeeeeccCCCceeEEEEeecccceEEEEEeeccccCcc
Confidence            45699999999999999999999999 999988765432           22345566655443332222 111222111


Q ss_pred             ----cccCCCCceEEEEEeCCHHHHHHHHHHcCCeeecCCeecCCCceEEEEEECCCCCEEEEEeC
Q 022818           86 ----SYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQR  147 (291)
Q Consensus        86 ----~~~~g~~~~~i~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~Dp~G~~iel~~~  147 (291)
                          ......++.|++|.|+|+++++++|+++|+++..+|....++.. .+|++||+|++|||+|.
T Consensus        83 ~~~~~~~~~~g~~hi~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~~~~-~~~~~DPdG~~iEl~e~  147 (149)
T d1ss4a_          83 DHRTAPVNALGYLRVMFTVEDIDEMVSRLTKHGAELVGEVVQYENSYR-LCYIRGVEGILIGLAEE  147 (149)
T ss_dssp             BCTTCCSSSBEEEEEEEEESCHHHHHHHHHHTTCEESSCCEEETTTEE-EEEEECGGGCEEEEEEE
T ss_pred             cccccCCCCcceeEEEEeechhHHHHHHHHHCCCeEccCCeECCCCeE-EEEEECCCCCEEEEEEc
Confidence                11133478999999999999999999999999888887776654 48999999999999985

>d1zswa1 d.32.1.10 (A:1-144) Hypothetical protein BC1024 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: BC1024-like
domain: Hypothetical protein BC1024
species: Bacillus cereus [TaxId: 1396]

Probab=99.82  E-value=7.4e-19  Score=130.41  Aligned_cols=130  Identities=9%  Similarity=0.078  Sum_probs=93.0

Q ss_pred             CcceeeEEEEEEeCCHHHHHHHHHhhcCCEEEEEeecCCC-ceeEEEEecCCCCcceEEEeeecCCCCcccCC-CCceEE
Q 022818           19 KDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEE-KYSNAFLGFGPEQSHFVVELTYNYGVTSYDIG-TGFGHF   96 (291)
Q Consensus        19 ~~~~~i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g-~~~~~i   96 (291)
                      .+|++|+||+|.|+|++++.+||+++|||++..+....+. .....+++.........+.........+...+ .+++|+
T Consensus         2 ~~i~gl~Hv~l~v~Dl~~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~Hi   81 (144)
T d1zswa1           2 YEIKGHHHISMVTKNANENNHFYKNVLGLRRVKMTVNQDDPSMYHLFYGDKTGSPGTELSFFEIPLVGRTYRGTNAITRI   81 (144)
T ss_dssp             SCCCSEEEEEEEESCHHHHHHHHHTTTCCEEEEEEEETTEEEEEEEEEESTTCCTTSEEEEEECTTCCBCBCCBSEEEEE
T ss_pred             CcccceeeEEEEeCCHHHHHHHHHHHhCCeeEeeeccccCCceeEEEecccccceeeEEeecccccccCCccCCCceeEE
Confidence            5689999999999999999999999999999877654332 23333444333334444555444333333333 358999


Q ss_pred             EEEeCC---HHHHHHHHHHcCCeeecCCeecCCCceEEEEEECCCCCEEEEEeCCCCC
Q 022818           97 AIATED---VYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRGPTP  151 (291)
Q Consensus        97 ~~~v~d---~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~Dp~G~~iel~~~~~~~  151 (291)
                      +|+|+|   ++++.++|++.|+.+.. +.... +.. .+||+|||||.|||++..+.+
T Consensus        82 af~v~~~~~l~~~~~~l~~~gv~~~~-~~~~~-~~~-~~yf~DPdG~~iEl~~~~~~~  136 (144)
T d1zswa1          82 GLLVPSEDSLHYWKERFEKFDVKHSE-MTTYA-NRP-ALQFEDAEGLRLVLLVSNGEK  136 (144)
T ss_dssp             EEEESCHHHHHHHHHHHHHTTCEECC-SEEET-TEE-EEEEECTTCCEEEEEECTTCC
T ss_pred             EEecCCchhHHHHhhhhhccceeeeC-ccccC-CeE-EEEEECCCCCEEEEEEeCCCC
Confidence            999988   77889999999998744 34433 333 489999999999999876543

>d2i7ra1 d.32.1.2 (A:1-115) Hypotheical protein SP0731 {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Hypotheical protein SP0731
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=99.81  E-value=7.9e-20  Score=130.34  Aligned_cols=115  Identities=19%  Similarity=0.122  Sum_probs=87.8

Q ss_pred             CCceEEEeeeCChhhhHHHHHHhcCCeeeeeeccCCccceEEEeccccCCceeEEEEeeecCcceeecCcceeEEEEEec
Q 022818          152 EPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTD  231 (291)
Q Consensus       152 ~~~~~v~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~hi~~~v~  231 (291)
                      +++.|+.|.|+|+++|++||+++||+++....+    ++.  .+..+    ...+.+......+.... +...+++|.|+
T Consensus         1 m~l~~i~i~V~di~~a~~FYe~~lg~~~~~~~~----~~~--~~~~g----~~~l~l~~~~~~~~~~~-~~~~~~~f~v~   69 (115)
T d2i7ra1           1 MNLNQLDIIVSNVPQVCADLEHILDKKADYAND----GFA--QFTIG----SHCLMLSQNHLVPLENF-QSGIIIHIEVE   69 (115)
T ss_dssp             CEEEEEEEECSCHHHHHHHHHHHHTSCCSEEET----TEE--EEEET----TEEEEEESSCSSSCCCC-CSCEEEEEECS
T ss_pred             CcceEEEEEECCHHHHHHHHHHhhCCceeeecC----CeE--EEEEc----CceeeeeecccCCCCCC-CcceEEEEEEC
Confidence            368899999999999999999999999765432    233  33322    34555544333222122 23368999999


Q ss_pred             chHHhHHHHHHHHHHhCCeeecCCccCCCCCceEEEEECCCCceEEEeech
Q 022818          232 DVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNE  282 (291)
Q Consensus       232 di~~~~~~l~~~~~~~G~~~~~~~~~~~~~~~~~~~~~DpdG~~iel~~~~  282 (291)
                      |++++++++    +++|+++..+|...|+ |.+.+||+|||||.|||.+.+
T Consensus        70 D~d~~~~~l----~~~G~~i~~~~~~~~~-g~~~~~~~DPdGn~ie~~~~k  115 (115)
T d2i7ra1          70 DVDQNYKRL----NELGIKVLHGPTVTDW-GTESLLVQGPAGLVLDFYRMK  115 (115)
T ss_dssp             CHHHHHHHH----HHHTCCEEEEEEECTT-SCEEEEEECGGGCEEEEEECC
T ss_pred             CHHHHHHHH----HhhccccccceEEeeC-CeEEEEEECCCCCEEEEEEeC
Confidence            999999999    9999999999998887 468999999999999999864

>d1mpya2 d.32.1.3 (A:146-307) Catechol 2,3-dioxygenase (metapyrocatechase) {Pseudomonas putida, mt2 [TaxId: 303]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Catechol 2,3-dioxygenase (metapyrocatechase)
species: Pseudomonas putida, mt2 [TaxId: 303]

Probab=99.81  E-value=6.3e-19  Score=133.41  Aligned_cols=149  Identities=17%  Similarity=0.207  Sum_probs=103.1

Q ss_pred             cceeeEEEEEEeCCHHHHHHHHHhhcCCEEEEEeecCCCceeEEEEecCCCCcceEEEeeecCCCCcccCCCCceEEEEE
Q 022818           20 DKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIA   99 (291)
Q Consensus        20 ~~~~i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~~~~i~~~   99 (291)
                      ..++++||.|.|+|++++++||+++|||++..+...........++..+........ . ...      ...+..|++|.
T Consensus         2 ~~~rldHv~l~v~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~------~~~~~~h~~~~   73 (162)
T d1mpya2           2 AAVRFDHALMYGDELPATYDLFTKVLGFYLAEQVLDENGTRVAQFLSLSTKAHDVAF-I-HHP------EKGRLHHVSFH   73 (162)
T ss_dssp             CCCEEEEEEEEESCHHHHHHHHHHTTCCEEEEEEECTTCCEEEEEEESSSBSCSEEE-E-ECS------SSSEEEEEEEE
T ss_pred             CcccccEEEEECCCHHHHHHHHHHccCCEEEEEEccccccceeeeeecccccccccc-c-ccC------CCCccceeEEE
Confidence            467899999999999999999999999999887666555555555544332222211 1 111      12368899999


Q ss_pred             eCCHH---HHHHHHHHcCCeeecCCeecCCCceEEEEEECCCCCEEEEEeCCCCCCC-ceEEEeeeCChhhhHHHHHHhc
Q 022818          100 TEDVY---KLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRGPTPEP-LCQVMLRVGDLGRSIKFYEKAL  175 (291)
Q Consensus       100 v~d~~---~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~Dp~G~~iel~~~~~~~~~-~~~v~l~v~d~~~~~~fy~~~l  175 (291)
                      +.+++   +++++|++.|+.+...|.....|...++||+|||||.|||....+.... ...+........+++.||.+.|
T Consensus        74 ~~~~~~~~~~~~~L~~~gv~~~~~p~~~~~g~~~~~y~~DPdGn~iEl~~~~~~~~p~~~p~~w~~~~~~~~~~~~~r~l  153 (162)
T d1mpya2          74 LETWEDLLRAADLISMTDTSIDIGPTRHGLTHGKTIYFFDPSGNRNEVFCGGDYNYPDHKPVTWTTDQLGKAIFYHDRIL  153 (162)
T ss_dssp             CSCHHHHHHHHHHHHHHTCCEEEEEEECSSTTCEEEEEECTTSCEEEEEECCCBCCTTSCCEEEEGGGHHHHHCTTTCSC
T ss_pred             EeeehhhhhHHHHHHHcCCccccCccccCCCCeEEEEEECCCCCEEEEEECCcccCCCCCCccCCHHHCCceeEecCCCC
Confidence            97655   7889999999998887777766665669999999999999987643211 1112223455555555665544


Q ss_pred             C
Q 022818          176 G  176 (291)
Q Consensus       176 G  176 (291)
                      -
T Consensus       154 ~  154 (162)
T d1mpya2         154 N  154 (162)
T ss_dssp             C
T ss_pred             C
Confidence            3

>d1ss4a_ d.32.1.6 (A:) Hypothetical protein BC1747 {Bacillus cereus (strain ATCC 14579 / DSM 31) [TaxId: 226900]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Hypothetical protein BC1747
domain: Hypothetical protein BC1747
species: Bacillus cereus (strain ATCC 14579 / DSM 31) [TaxId: 226900]

Probab=99.80  E-value=7.9e-19  Score=130.89  Aligned_cols=123  Identities=15%  Similarity=0.234  Sum_probs=90.4

Q ss_pred             CCCceEEEeeeCChhhhHHHHHHhcCCeeeeeeccC-----------CccceEEEeccccCCceeEEEEeeec---Ccce
Q 022818          151 PEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKP-----------EYKYTLAMLGYAEEDQTTVLELTYNY---GVTE  216 (291)
Q Consensus       151 ~~~~~~v~l~v~d~~~~~~fy~~~lG~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~l~l~~~~---~~~~  216 (291)
                      ..++.|++|.|+|++++.+||++ |||++..+....           +......++....+  ...+++....   ....
T Consensus         7 ~~ri~Hv~i~v~Dle~s~~FY~~-LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~--~~~~~l~~~~~~~~~~~   83 (149)
T d1ss4a_           7 LLRMDNVSIVVESLDNAISFFEE-IGLNLEGRANVEGEWAGRVTGLGSQCVEIAMMVTPDG--HSRIELSRFLTPPTIAD   83 (149)
T ss_dssp             EEEEEEEEEECSCHHHHHHHHHH-HTCEEEEEEEECSHHHHHHHSCCSCEEEEEEEECTTS--SCEEEEEEEEESCCCCB
T ss_pred             CCEEeEEEEEeCCHHHHHHHHHH-cCCcEeeeeccceeeeeeeeccCCCceeEEEEeeccc--ceEEEEEeeccccCccc
Confidence            35799999999999999999998 999987654321           22334555554333  3334443221   1111


Q ss_pred             ----eecCcceeEEEEEecchHHhHHHHHHHHHHhCCeeecCCccCCCCCceEEEEECCCCceEEEeec
Q 022818          217 ----YTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDN  281 (291)
Q Consensus       217 ----~~~~~~~~hi~~~v~di~~~~~~l~~~~~~~G~~~~~~~~~~~~~~~~~~~~~DpdG~~iel~~~  281 (291)
                          .....|+.|++|.|+|+++++++|    +++|+++..+|...++ +.+.+|++||||+.|||+|+
T Consensus        84 ~~~~~~~~~g~~hi~~~v~d~~~~~~~l----~~~G~~~~~~~~~~~~-~~~~~~~~DPdG~~iEl~e~  147 (149)
T d1ss4a_          84 HRTAPVNALGYLRVMFTVEDIDEMVSRL----TKHGAELVGEVVQYEN-SYRLCYIRGVEGILIGLAEE  147 (149)
T ss_dssp             CTTCCSSSBEEEEEEEEESCHHHHHHHH----HHTTCEESSCCEEETT-TEEEEEEECGGGCEEEEEEE
T ss_pred             ccccCCCCcceeEEEEeechhHHHHHHH----HHCCCeEccCCeECCC-CeEEEEEECCCCCEEEEEEc
Confidence                112347899999999999999999    9999999888876655 45789999999999999986

>d1jc4a_ d.32.1.4 (A:) Methylmalonyl-CoA epimerase {Propionibacterium shermanii [TaxId: 1752]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Methylmalonyl-CoA epimerase
domain: Methylmalonyl-CoA epimerase
species: Propionibacterium shermanii [TaxId: 1752]

Probab=99.79  E-value=1.1e-18  Score=129.45  Aligned_cols=131  Identities=21%  Similarity=0.305  Sum_probs=93.0

Q ss_pred             CCCcceeeEEEEEEeCCHHHHHHHHHhhcCCEEEEEeecCCCceeEEEEec--CCCCcceEEEeeecCCCC--------c
Q 022818           17 PKKDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGF--GPEQSHFVVELTYNYGVT--------S   86 (291)
Q Consensus        17 ~~~~~~~i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~~~~~~~~--------~   86 (291)
                      ++.|+++|+||+|.|+|+++|.+||+++||++..........+........  ........+++.......        .
T Consensus         1 ~~~m~~~i~Hi~i~v~Dl~~a~~fY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~~~~~~~~~~~~~~~   80 (145)
T d1jc4a_           1 NEDLFICIDHVAYACPDADEASKYYQETFGWHELHREENPEQGVVEIMMAPAAKLTEHMTQVQVMAPLNDESTVAKWLAK   80 (145)
T ss_dssp             CCCCCSEEEEEEEECSCHHHHHHHHHHHHCCEEEEEEEETTTTEEEEEEESSSSCCTTCCEEEEEEESSTTSHHHHHHHH
T ss_pred             CcccceEEeEEEEEeCCHHHHHHHHHhhccCceeeeeeecccceEEEeeeceeccccccchhhhhhhhcccCcccccccc
Confidence            357899999999999999999999999999999877665554433333221  011122334444332211        1


Q ss_pred             ccCCCCceEEEEEeCCHHHHHHHHHHcCCeeecC-CeecCCCceEEEEE--ECCCCCEEEEEeCC
Q 022818           87 YDIGTGFGHFAIATEDVYKLVENIRAKGGNVTRE-PGPLKGGTTHIAFV--KDPDGYIFELIQRG  148 (291)
Q Consensus        87 ~~~g~~~~~i~~~v~d~~~~~~~l~~~G~~~~~~-~~~~~~g~~~~~~~--~Dp~G~~iel~~~~  148 (291)
                      ...+.|++|+||.|+|+++++++|+++|+++..+ +....+|... +|+  +||+|++|||+|..
T Consensus        81 ~~~~~g~~Hia~~v~di~~~~~~l~~~Gv~~~~~~~~~~~~g~~~-~f~~p~dp~G~~iEl~e~p  144 (145)
T d1jc4a_          81 HNGRAGLHHMAWRVDDIDAVSATLRERGVQLLYDEPKLGTGGNRI-NFMHPKSGKGVLIELTQYP  144 (145)
T ss_dssp             TTTCCEEEEEEEECSCHHHHHHHHHHHTCCBSCSSCEECSSSCEE-EEBCGGGGTTSCEEEEECC
T ss_pred             cCCCCcceEEEEecchHHHHHHHHHHCCCEEeCCCceECCCCCEE-EEEeccCCCCeEEEEEECC
Confidence            1235589999999999999999999999998654 4555555543 555  79999999999974

>d1r9ca_ d.32.1.2 (A:) Fosfomycin resistance protein FosX {Mesorhizobium loti [TaxId: 381]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Fosfomycin resistance protein FosX
species: Mesorhizobium loti [TaxId: 381]

Probab=99.78  E-value=2.8e-18  Score=124.90  Aligned_cols=120  Identities=18%  Similarity=0.249  Sum_probs=85.0

Q ss_pred             cceeeEEEEEEeCCHHHHHHHHHhhcCCEEEEEeecCCC-ceeEEEEecCCCCcceEEEeeecCCCCcccCCCCceEEEE
Q 022818           20 DKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEE-KYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAI   98 (291)
Q Consensus        20 ~~~~i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~~~~i~~   98 (291)
                      |+.+|+|+.|.|+|++++++||+++|||++..+...... .....++..++    ..+.+......    ...+..|++|
T Consensus         1 Mi~~i~Hi~l~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~----~~~~~~~~~f   72 (130)
T d1r9ca_           1 MIEGLSHMTFIVRDLERMTRILEGVFDAREVYASDTEQFSLSREKFFLIGD----IWVAIMQGEKL----AERSYNHIAF   72 (130)
T ss_dssp             CEEEEEEEEEEESCHHHHHHHHHHHHCCEEEEEGGGSTTCCSCEEEEEETT----EEEEEEECCCC----SSCCSCEEEE
T ss_pred             CCCcEeEEEEEeCCHHHHHHHHHHhcCCEEEEEcCCccccceeEEEEecCC----EEEeecccccc----cccceeeeee
Confidence            688999999999999999999999999999887554332 22334444332    22333332221    2336788999


Q ss_pred             Ee--CCHHHHHHHHHHcCCeeecCCeecCCCceEEEEEECCCCCEEEEEeCC
Q 022818           99 AT--EDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRG  148 (291)
Q Consensus        99 ~v--~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~Dp~G~~iel~~~~  148 (291)
                      .+  +|+++++++|+++|+++..++....++.. .+||+|||||+|||....
T Consensus        73 ~v~~~dv~~~~~~l~~~gv~i~~~~~~~~~~~~-~~~~~DPdGn~iEl~~~~  123 (130)
T d1r9ca_          73 KIDDADFDRYAERVGKLGLDMRPPRPRVEGEGR-SIYFYDDDNHMFELHTGT  123 (130)
T ss_dssp             ECCGGGHHHHHHHHHHHTCCBCCCCC-----CC-EEEEECTTSCEEEEECCC
T ss_pred             cccHHHHHHHHHHHHHCCCeEecCCcccCCCEE-EEEEECCCCCEEEEEECC
Confidence            77  57999999999999998776555555444 389999999999997653

>d1zswa1 d.32.1.10 (A:1-144) Hypothetical protein BC1024 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: BC1024-like
domain: Hypothetical protein BC1024
species: Bacillus cereus [TaxId: 1396]

Probab=99.77  E-value=5e-18  Score=125.81  Aligned_cols=126  Identities=15%  Similarity=0.179  Sum_probs=86.9

Q ss_pred             CCCceEEEeeeCChhhhHHHHHHhcCCeeeeeeccCC-ccceEEEeccccCCceeEEEEeeecCcce-eecCcceeEEEE
Q 022818          151 PEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPE-YKYTLAMLGYAEEDQTTVLELTYNYGVTE-YTKGNAYAQVAI  228 (291)
Q Consensus       151 ~~~~~~v~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~l~~~~~~~~-~~~~~~~~hi~~  228 (291)
                      ..++.||+|.|+|++++.+||+++|||++..+....+ .....++.+.........+.+.......+ ....+++.|++|
T Consensus         4 i~gl~Hv~l~v~Dl~~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~Hiaf   83 (144)
T d1zswa1           4 IKGHHHISMVTKNANENNHFYKNVLGLRRVKMTVNQDDPSMYHLFYGDKTGSPGTELSFFEIPLVGRTYRGTNAITRIGL   83 (144)
T ss_dssp             CCSEEEEEEEESCHHHHHHHHHTTTCCEEEEEEEETTEEEEEEEEEESTTCCTTSEEEEEECTTCCBCBCCBSEEEEEEE
T ss_pred             ccceeeEEEEeCCHHHHHHHHHHHhCCeeEeeeccccCCceeEEEecccccceeeEEeecccccccCCccCCCceeEEEE
Confidence            4579999999999999999999999999887654333 22333334433333344555544333222 223346899999


Q ss_pred             Eecc---hHHhHHHHHHHHHHhCCeeecCCccCCCCCceEEEEECCCCceEEEeechh
Q 022818          229 STDD---VYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNED  283 (291)
Q Consensus       229 ~v~d---i~~~~~~l~~~~~~~G~~~~~~~~~~~~~~~~~~~~~DpdG~~iel~~~~~  283 (291)
                      .|+|   ++++.++|    ++.|+.+. .+....  +.+.+||+|||||+|||++..+
T Consensus        84 ~v~~~~~l~~~~~~l----~~~gv~~~-~~~~~~--~~~~~yf~DPdG~~iEl~~~~~  134 (144)
T d1zswa1          84 LVPSEDSLHYWKERF----EKFDVKHS-EMTTYA--NRPALQFEDAEGLRLVLLVSNG  134 (144)
T ss_dssp             EESCHHHHHHHHHHH----HHTTCEEC-CSEEET--TEEEEEEECTTCCEEEEEECTT
T ss_pred             ecCCchhHHHHhhhh----hccceeee-CccccC--CeEEEEEECCCCCEEEEEEeCC
Confidence            9998   44444555    99999874 343332  3588999999999999998765

>d1mpya2 d.32.1.3 (A:146-307) Catechol 2,3-dioxygenase (metapyrocatechase) {Pseudomonas putida, mt2 [TaxId: 303]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Catechol 2,3-dioxygenase (metapyrocatechase)
species: Pseudomonas putida, mt2 [TaxId: 303]

Probab=99.77  E-value=4.7e-18  Score=128.51  Aligned_cols=121  Identities=15%  Similarity=0.178  Sum_probs=88.8

Q ss_pred             CCCceEEEeeeCChhhhHHHHHHhcCCeeeeeeccCCccceEEEeccccCCceeEEEEeeecCcceeecCcceeEEEEEe
Q 022818          151 PEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAIST  230 (291)
Q Consensus       151 ~~~~~~v~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~hi~~~v  230 (291)
                      ..+++||.|.|+|++++++||+++|||++..+...........+....... .... ...      ....++..|++|.+
T Consensus         3 ~~rldHv~l~v~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~------~~~~~~~~h~~~~~   74 (162)
T d1mpya2           3 AVRFDHALMYGDELPATYDLFTKVLGFYLAEQVLDENGTRVAQFLSLSTKA-HDVA-FIH------HPEKGRLHHVSFHL   74 (162)
T ss_dssp             CCEEEEEEEEESCHHHHHHHHHHTTCCEEEEEEECTTCCEEEEEEESSSBS-CSEE-EEE------CSSSSEEEEEEEEC
T ss_pred             cccccEEEEECCCHHHHHHHHHHccCCEEEEEEccccccceeeeeeccccc-cccc-ccc------cCCCCccceeEEEE
Confidence            357999999999999999999999999998877665554444544433321 1111 111      12345789999999


Q ss_pred             cchH---HhHHHHHHHHHHhCCeeecCCccCCCCCceEEEEECCCCceEEEeechh
Q 022818          231 DDVY---KSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNED  283 (291)
Q Consensus       231 ~di~---~~~~~l~~~~~~~G~~~~~~~~~~~~~~~~~~~~~DpdG~~iel~~~~~  283 (291)
                      .+++   ++.++|    ++.|+++..+|.....+..+++||+|||||.|||.....
T Consensus        75 ~~~~~~~~~~~~L----~~~gv~~~~~p~~~~~g~~~~~y~~DPdGn~iEl~~~~~  126 (162)
T d1mpya2          75 ETWEDLLRAADLI----SMTDTSIDIGPTRHGLTHGKTIYFFDPSGNRNEVFCGGD  126 (162)
T ss_dssp             SCHHHHHHHHHHH----HHHTCCEEEEEEECSSTTCEEEEEECTTSCEEEEEECCC
T ss_pred             eeehhhhhHHHHH----HHcCCccccCccccCCCCeEEEEEECCCCCEEEEEECCc
Confidence            8754   444555    999999988888776655688999999999999987644

>d1f1ua1 d.32.1.3 (A:2-147) Homoprotocatechuate 2,3-dioxygenase {Arthrobacter globiformis [TaxId: 1665]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Homoprotocatechuate 2,3-dioxygenase
species: Arthrobacter globiformis [TaxId: 1665]

Probab=99.77  E-value=5.6e-18  Score=125.84  Aligned_cols=118  Identities=19%  Similarity=0.256  Sum_probs=87.6

Q ss_pred             cceeeEEEEEEeCCHHHHHHHHHhhcCCEEEEEeecCCCceeEEEEecCCCCcceEEEeeecCCCCcccCCCCceEEEEE
Q 022818           20 DKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIA   99 (291)
Q Consensus        20 ~~~~i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~~~~i~~~   99 (291)
                      .+++|+||.|.|+|++++++||+++|||++.....  +    ..++...+....+.+.+...       ...++.|++|.
T Consensus        13 ~i~rl~hv~l~v~Dl~~s~~FY~~~lG~~~~~~~~--~----~~~~~~~~~~~~~~~~~~~~-------~~~~~~h~~~~   79 (146)
T d1f1ua1          13 DIVRCAYMEIVVTDLAKSREFYVDVLGLHVTEEDE--N----TIYLRSLEEFIHHNLVLRQG-------PIAAVAAFAYR   79 (146)
T ss_dssp             CEEEEEEEEEEESCHHHHHHHHTTTTCCEEEEECS--S----EEEEECTTCCSSCSEEEEEC-------SSCEEEEEEEE
T ss_pred             CCcEEeEEEEEeCCHHHHHHHHHhccCcEEEeecC--C----ceeeecccccccceeecccc-------CCCCCceeeEe
Confidence            48999999999999999999999999999986533  1    23333222222332322222       12378899999


Q ss_pred             eC---CHHHHHHHHHHcCCeeecCCeecCCCceEEEEEECCCCCEEEEEeCCCC
Q 022818          100 TE---DVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRGPT  150 (291)
Q Consensus       100 v~---d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~Dp~G~~iel~~~~~~  150 (291)
                      +.   |++++.++|+++|+++...+.....|....+||+||+||+|||+...+.
T Consensus        80 ~~~~~dl~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~DPdG~~iEl~~~~e~  133 (146)
T d1f1ua1          80 VKSPAEVDAAEAYYKELGCRTERRKEGFTKGIGDSVRVEDPLGFPYEFFYETEH  133 (146)
T ss_dssp             ESSHHHHHHHHHHHHHTTCCEEEETTCSSTTBCSEEEEECTTSCEEEEECCBCC
T ss_pred             eccchhHHHHHHHHHHcCCceeeccccccCCceEEEEEECCCCcEEEEEEeccc
Confidence            95   6889999999999998877666666554458999999999999876543

>d1twua_ d.32.1.8 (A:) Hypothetical protein YycE {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Hypothetical protein YycE
domain: Hypothetical protein YycE
species: Bacillus subtilis [TaxId: 1423]

Probab=99.77  E-value=9.7e-19  Score=128.64  Aligned_cols=120  Identities=18%  Similarity=0.303  Sum_probs=86.6

Q ss_pred             EEeeeCChhhhHHHHHHhcCCeeeeeeccCCccceEEEeccccCCceeEEEEeeecCcceeecCcceeEEEEEecc---h
Q 022818          157 VMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDD---V  233 (291)
Q Consensus       157 v~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~hi~~~v~d---i  233 (291)
                      |.+.|+|++++.+||+++|||++..+.....+ +.++++..+..  ...+.+....+......+.+..|++|.|+|   +
T Consensus        13 Va~pv~Dle~s~~FY~~vLG~~~~~~~~~~~~-~~~~~~~~~~~--~~~l~~~~~~~~~~~~~~~~~~hlaf~v~~~~dv   89 (137)
T d1twua_          13 IARPTGQLDEIIRFYEEGLCLKRIGEFSQHNG-YDGVMFGLPHA--DYHLEFTQYEGGSTAPVPHPDSLLVFYVPNAVEL   89 (137)
T ss_dssp             EEEECSCHHHHHHHHTTTSCCCEEEEEEEETT-EEEEEEESSSS--SEEEEEEEETTCCCCCCCCTTCEEEEECCCHHHH
T ss_pred             EecccCCHHHHHHHHHhccCCceeeeeccccc-eeEEEecCCCC--ceeeecccccccccccccccCceEEEEeCCHHHH
Confidence            34455899999999999999998876554433 56666664432  455666555554443445567899999887   5


Q ss_pred             HHhHHHHHHHHHHhCCeeecCCccCCCCCceEEEEECCCCceEEEeechhhh
Q 022818          234 YKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNEDFL  285 (291)
Q Consensus       234 ~~~~~~l~~~~~~~G~~~~~~~~~~~~~~~~~~~~~DpdG~~iel~~~~~~~  285 (291)
                      ++++++|    +++|++++.++..  .++.+.+||+||||++|||++.+...
T Consensus        90 ~~~~~~l----~~~G~~~~~~~~~--~~~~~~~~f~DPDG~~Iel~~~~~~~  135 (137)
T d1twua_          90 AAITSKL----KHMGYQEVESENP--YWSNGGVTIEDPDGWRIVFMNSKGIS  135 (137)
T ss_dssp             HHHHHHH----HHTTCCEECCSSH--HHHSSEEEEECTTCCEEEEESSCCCC
T ss_pred             HHHHHHH----HHCCCeEeCCCCC--CCCceEEEEECCCCCEEEEEcCCCCc
Confidence            5566666    9999998866542  33457899999999999999877643

>d1zswa2 d.32.1.10 (A:145-314) Hypothetical protein BC1024 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: BC1024-like
domain: Hypothetical protein BC1024
species: Bacillus cereus [TaxId: 1396]

Probab=99.77  E-value=8.4e-18  Score=128.00  Aligned_cols=121  Identities=18%  Similarity=0.211  Sum_probs=83.3

Q ss_pred             CcceeeEEEEEEeCCHHHHHHHHHhhcCCEEEEEeecCCCceeEEEEecCCCCcceEEEeeecCCCCcccCCCCceEEEE
Q 022818           19 KDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAI   98 (291)
Q Consensus        19 ~~~~~i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~~~~i~~   98 (291)
                      .+|++|+||.|.|+|++++.+||+++|||++..+.+    .. ..+...++..... +...............+++|++|
T Consensus         8 ~~I~Gl~HV~L~V~Dle~s~~FY~~vLG~~~~~~~~----~~-~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~HiAf   81 (170)
T d1zswa2           8 HQIQGMGSVELTVRRLDKMASTLTEIFGYTEVSRND----QE-AIFQSIKGEAFGE-IVVKYLDGPTEKPGRGSIHHLAI   81 (170)
T ss_dssp             GSCCEEEEEEEEESCHHHHHHHHHHTTCCEEEEECS----SE-EEEESSTTCSTTC-EEEEECCSSBCBCCBTCEEEEEE
T ss_pred             HHhCCeeeEEEEeCCHHHHHHHHHHHhCCEEEeecC----ce-EEEEeccCccceE-EEeccccccccccCccccceEEE
Confidence            358999999999999999999999999999987643    11 2232222222222 22222222222222236899999


Q ss_pred             EeCC---HHHHHHHHHHcCCeeecCCeecCCCceEEEEEECCCCCEEEEEeCC
Q 022818           99 ATED---VYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRG  148 (291)
Q Consensus        99 ~v~d---~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~Dp~G~~iel~~~~  148 (291)
                      .|+|   ++++++++.+.|+++.. +.+.  +..+.+||+|||||+||++...
T Consensus        82 ~V~~~~~l~~~~~~l~~~G~~~~~-~~~~--~~~~s~Yf~DPdG~~iEl~t~~  131 (170)
T d1zswa2          82 RVKNDAELAYWEEQVKQRGFHSSG-IIDR--FYFKSLYFRESNGILFEIATDG  131 (170)
T ss_dssp             EESSHHHHHHHHHHHHHTTCCCCC-CEEC--SSEEEEEEECTTCCEEEEEEEE
T ss_pred             EeCChHHHHHHHHHHHhcCCCccc-cccC--CCEEEEEEECCCCcEEEEEECC
Confidence            9976   77889999999998643 3333  3344589999999999999854

>d1qipa_ d.32.1.1 (A:) Glyoxalase I (lactoylglutathione lyase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Glyoxalase I (lactoylglutathione lyase)
domain: Glyoxalase I (lactoylglutathione lyase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.77  E-value=6.9e-18  Score=129.43  Aligned_cols=131  Identities=29%  Similarity=0.525  Sum_probs=94.5

Q ss_pred             CCCcceeeEEEEEEeCCHHHHHHHHHhhcCCEEEEEeecCCCceeEEEEecCCCC-----------------cceEEEee
Q 022818           17 PKKDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQ-----------------SHFVVELT   79 (291)
Q Consensus        17 ~~~~~~~i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~-----------------~~~~l~~~   79 (291)
                      +.+..-+++|++|.|+|+++|++||+++|||++......+.......++..+...                 ....+...
T Consensus        17 ~~~~~~~l~Hi~l~V~Dl~~si~FY~~vLG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   96 (176)
T d1qipa_          17 PSTKDFLLQQTMLRVKDPKKSLDFYTRVLGMTLIQKCDFPIMKFSLYFLAYEDKNDIPKEKDEKIAWALSRKATLELTHN   96 (176)
T ss_dssp             GGGTTCEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEETTTTEEEEEEESCCGGGSCSSHHHHHHHHTTSSSEEEEEEE
T ss_pred             CCccceEEeEEEEEeCCHHHHHHHHHHhhCCeEeeeecccCCceEEEEeecCCccccccccccccccccccccceeEEEe
Confidence            3344567999999999999999999999999998887777666666665432211                 01111111


Q ss_pred             ec---CCCCc----ccCCCCceEEEEEeCCHHHHHHHHHHcCCeeecCCeecCCCceEEEEEECCCCCEEEEEeCCC
Q 022818           80 YN---YGVTS----YDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRGP  149 (291)
Q Consensus        80 ~~---~~~~~----~~~g~~~~~i~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~Dp~G~~iel~~~~~  149 (291)
                      ..   .....    .....++.|+|+.++|++++.++|+++|+++..+|.......  .+||+|||||.|||+|...
T Consensus        97 ~~~~~~~~~~~~~~~~~~~g~~h~~~~~~d~~~~~~~l~~~Gv~~~~~p~~g~~~~--~~f~~DPdG~~IElvq~~~  171 (176)
T d1qipa_          97 WGTEDDETQSYHNGNSDPRGFGHIGIAVPDVYSACKRFEELGVKFVKKPDDGKMKG--LAFIQDPDGYWIEILNPNK  171 (176)
T ss_dssp             TTGGGCTTCCCBCSSSSSCBEEEEEEECSCHHHHHHHHHHTTCEEEECTTSSSSTT--CEEEECTTCCEEEEECTTT
T ss_pred             eccccccCcCccCCCCCccceeEEEeeHHHHHHHHHHHHHCCCEEeeCCccCCceE--EEEEECCCCCEEEEEeCCC
Confidence            11   11111    112347899999999999999999999999999887655433  3788999999999999864

>d2c21a1 d.32.1.1 (A:3-141) Glyoxalase I (lactoylglutathione lyase) {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Glyoxalase I (lactoylglutathione lyase)
domain: Glyoxalase I (lactoylglutathione lyase)
species: Leishmania major [TaxId: 5664]

Probab=99.75  E-value=1.5e-17  Score=121.97  Aligned_cols=126  Identities=44%  Similarity=0.709  Sum_probs=90.7

Q ss_pred             CCceEEEeeeCChhhhHHHHHHhcCCeeeeeeccCCccceEEEeccccCCceeEEEEeeecCcceeecCcceeEEEEEec
Q 022818          152 EPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTD  231 (291)
Q Consensus       152 ~~~~~v~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~hi~~~v~  231 (291)
                      .++.|++|.|+|+++|++||+++|||++.............................................++++.++
T Consensus         2 ~r~~Hv~l~V~Dl~~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (139)
T d2c21a1           2 RRMLHTMIRVGDLDRSIKFYTERLGMKVLRKWDVPEDKYTLVFLGYGPEMSSTVLELTYNYGVTSYKHDEAYGHIAIGVE   81 (139)
T ss_dssp             CEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEEGGGTEEEEEEESSCTTTSCEEEEEEETTCCCCCCCSSEEEEEEEES
T ss_pred             CceEEEEEEeCCHHHHHHHHHHHhCCEeeccccccccceeeeeecccccccccccccccccCcccccCCCccceeeeehh
Confidence            46899999999999999999999999998877655554444444332221222222222222222334457789999999


Q ss_pred             chHHhHHHHHHHHHHhCCeeecCCccCCCCCceEEEEECCCCceEEEeechhhhh
Q 022818          232 DVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNEDFLK  286 (291)
Q Consensus       232 di~~~~~~l~~~~~~~G~~~~~~~~~~~~~~~~~~~~~DpdG~~iel~~~~~~~~  286 (291)
                      ++.+.++.+    ...++++..++.     +.+++||+|||||+|||++.....+
T Consensus        82 ~~~~~~~~~----~~~~~~~~~~~~-----g~~~~~~~DPdGn~iEl~~~~~~~~  127 (139)
T d2c21a1          82 DVKELVADM----RKHDVPIDYEDE-----SGFMAFVVDPDGYYIELLNEKTMME  127 (139)
T ss_dssp             CHHHHHHHH----HHTTCCEEEECS-----SSSEEEEECTTSCEEEEEEHHHHHH
T ss_pred             hHHHHHHHH----HHcCCceeeCCC-----CcEEEEEECCCCCEEEEEECCCCCC
Confidence            999999999    899988766543     3588999999999999999876543

>d1jc4a_ d.32.1.4 (A:) Methylmalonyl-CoA epimerase {Propionibacterium shermanii [TaxId: 1752]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Methylmalonyl-CoA epimerase
domain: Methylmalonyl-CoA epimerase
species: Propionibacterium shermanii [TaxId: 1752]

Probab=99.75  E-value=7.8e-18  Score=124.72  Aligned_cols=128  Identities=14%  Similarity=0.141  Sum_probs=91.2

Q ss_pred             CCCceEEEeeeCChhhhHHHHHHhcCCeeeeeeccCCccceEEEecc--ccCCceeEEEEeeecCcce--------eecC
Q 022818          151 PEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGY--AEEDQTTVLELTYNYGVTE--------YTKG  220 (291)
Q Consensus       151 ~~~~~~v~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~l~~~~~~~~--------~~~~  220 (291)
                      ..+|+||+|.|+|+++|++||+++||+++.........+........  ........+++........        ....
T Consensus         5 ~~~i~Hi~i~v~Dl~~a~~fY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~~~~~~~~~~~~~~~~~~~   84 (145)
T d1jc4a_           5 FICIDHVAYACPDADEASKYYQETFGWHELHREENPEQGVVEIMMAPAAKLTEHMTQVQVMAPLNDESTVAKWLAKHNGR   84 (145)
T ss_dssp             CSEEEEEEEECSCHHHHHHHHHHHHCCEEEEEEEETTTTEEEEEEESSSSCCTTCCEEEEEEESSTTSHHHHHHHHTTTC
T ss_pred             ceEEeEEEEEeCCHHHHHHHHHhhccCceeeeeeecccceEEEeeeceeccccccchhhhhhhhcccCcccccccccCCC
Confidence            35799999999999999999999999998877655444333332221  1122356677766543321        1234


Q ss_pred             cceeEEEEEecchHHhHHHHHHHHHHhCCeeecCCccCCCCCceEEEE--ECCCCceEEEeech
Q 022818          221 NAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSF--VDPDGWKTVLVDNE  282 (291)
Q Consensus       221 ~~~~hi~~~v~di~~~~~~l~~~~~~~G~~~~~~~~~~~~~~~~~~~~--~DpdG~~iel~~~~  282 (291)
                      .|+.||||.|+|+++++++|    +++|++++.++......+.+.+|+  +||+|++|||+|..
T Consensus        85 ~g~~Hia~~v~di~~~~~~l----~~~Gv~~~~~~~~~~~~g~~~~f~~p~dp~G~~iEl~e~p  144 (145)
T d1jc4a_          85 AGLHHMAWRVDDIDAVSATL----RERGVQLLYDEPKLGTGGNRINFMHPKSGKGVLIELTQYP  144 (145)
T ss_dssp             CEEEEEEEECSCHHHHHHHH----HHHTCCBSCSSCEECSSSCEEEEBCGGGGTTSCEEEEECC
T ss_pred             CcceEEEEecchHHHHHHHH----HHCCCEEeCCCceECCCCCEEEEEeccCCCCeEEEEEECC
Confidence            58999999999999999999    999999876543332223455556  79999999999963

>d1zswa2 d.32.1.10 (A:145-314) Hypothetical protein BC1024 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: BC1024-like
domain: Hypothetical protein BC1024
species: Bacillus cereus [TaxId: 1396]

Probab=99.75  E-value=9.1e-18  Score=127.79  Aligned_cols=120  Identities=14%  Similarity=0.050  Sum_probs=81.4

Q ss_pred             CCceEEEeeeCChhhhHHHHHHhcCCeeeeeeccCCccceEEEeccccCCceeEEEEeeecCcceeecCcceeEEEEEec
Q 022818          152 EPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTD  231 (291)
Q Consensus       152 ~~~~~v~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~hi~~~v~  231 (291)
                      .++.||+|.|+|++++.+||+++|||+++.+.+    .+..+....+..  ...+.+.....+...+...+++||+|.|+
T Consensus        11 ~Gl~HV~L~V~Dle~s~~FY~~vLG~~~~~~~~----~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~l~HiAf~V~   84 (170)
T d1zswa2          11 QGMGSVELTVRRLDKMASTLTEIFGYTEVSRND----QEAIFQSIKGEA--FGEIVVKYLDGPTEKPGRGSIHHLAIRVK   84 (170)
T ss_dssp             CEEEEEEEEESCHHHHHHHHHHTTCCEEEEECS----SEEEEESSTTCS--TTCEEEEECCSSBCBCCBTCEEEEEEEES
T ss_pred             CCeeeEEEEeCCHHHHHHHHHHHhCCEEEeecC----ceEEEEeccCcc--ceEEEeccccccccccCccccceEEEEeC
Confidence            468999999999999999999999999887643    123333332222  22222222222222233347899999998


Q ss_pred             chHHhHHHHHHHHHHhCCeeecCCccCCCCCceEEEEECCCCceEEEeec
Q 022818          232 DVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDN  281 (291)
Q Consensus       232 di~~~~~~l~~~~~~~G~~~~~~~~~~~~~~~~~~~~~DpdG~~iel~~~  281 (291)
                      | .+.++++..+++++|+++. ++..+.+  .+.+||+|||||+|||+..
T Consensus        85 ~-~~~l~~~~~~l~~~G~~~~-~~~~~~~--~~s~Yf~DPdG~~iEl~t~  130 (170)
T d1zswa2          85 N-DAELAYWEEQVKQRGFHSS-GIIDRFY--FKSLYFRESNGILFEIATD  130 (170)
T ss_dssp             S-HHHHHHHHHHHHHTTCCCC-CCEECSS--EEEEEEECTTCCEEEEEEE
T ss_pred             C-hHHHHHHHHHHHhcCCCcc-ccccCCC--EEEEEEECCCCcEEEEEEC
Confidence            8 4444555566699999874 4443333  5789999999999999875

>d1sqia1 d.32.1.3 (A:8-156) 4-hydroxyphenylpyruvate dioxygenase, HppD {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.75  E-value=6.9e-18  Score=125.80  Aligned_cols=134  Identities=18%  Similarity=0.235  Sum_probs=95.9

Q ss_pred             CCcceeeEEEEEEeCCHHHHHHHHHhhcCCEEEEEeecCCCceeEEEEecCCCCcceEEEeeecCCCCc-----ccCCCC
Q 022818           18 KKDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTS-----YDIGTG   92 (291)
Q Consensus        18 ~~~~~~i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~-----~~~g~~   92 (291)
                      ...+.+|+||+|.|+|+++|++||+++|||+...+...+.+.....++.+......+.+..........     ...+.+
T Consensus         6 ~~~~~~~dHi~i~V~Dl~~a~~fY~~~lGf~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~g~G   85 (149)
T d1sqia1           6 RGRFLHFHSVTFWVGNAKQAASFYCNKMGFEPLAYKGLETGSREVVSHVIKQGKIVFVLCSALNPWNKEMGDHLVKHGDG   85 (149)
T ss_dssp             SCEEEEEEEEEEECSCHHHHHHHHHHHHCCEEEEEESGGGTCCSEEEEEEEETTEEEEEEEESSTTCHHHHHHHHHHCSE
T ss_pred             CCceeeEeEEEEEcCCHHHHHHHHhhccceEEEEEecccCCceEEEEEEecCCcEEEEEEeccCCCCchhhhhhhhCCCe
Confidence            345899999999999999999999999999998876654443222222222223333332222211111     124678


Q ss_pred             ceEEEEEeCCHHHHHHHHHHcCCeeecCCeecC--CCceEEEEEECCCCCEEEEEeCCCCC
Q 022818           93 FGHFAIATEDVYKLVENIRAKGGNVTREPGPLK--GGTTHIAFVKDPDGYIFELIQRGPTP  151 (291)
Q Consensus        93 ~~~i~~~v~d~~~~~~~l~~~G~~~~~~~~~~~--~g~~~~~~~~Dp~G~~iel~~~~~~~  151 (291)
                      ++|+||.|+|+++++++|+++|+++..+|....  .|...+++++.|.|..++|++.....
T Consensus        86 ~~hiaf~V~di~~~~~~l~~~G~~~~~~P~~~~d~~G~v~~a~i~~~g~~~~~lier~~~~  146 (149)
T d1sqia1          86 VKDIAFEVEDCEHIVQKARERGAKIVREPWVEEDKFGKVKFAVLQTYGDTTHTLVEKINYT  146 (149)
T ss_dssp             EEEEEEEEECHHHHHHHHHHHTCCEEEEEEEEEETTEEEEEEEEECSTTCEEEEEEEESCC
T ss_pred             EEEEEEEeccHHHHHHHHHHCCCEEccCCeEEECCCCeEEEEEEECCCCCEEEEEEeCCCc
Confidence            999999999999999999999999888887653  34445678898989999999976543

>d1qipa_ d.32.1.1 (A:) Glyoxalase I (lactoylglutathione lyase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Glyoxalase I (lactoylglutathione lyase)
domain: Glyoxalase I (lactoylglutathione lyase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.75  E-value=8.5e-18  Score=128.89  Aligned_cols=127  Identities=28%  Similarity=0.487  Sum_probs=92.4

Q ss_pred             CCceEEEeeeCChhhhHHHHHHhcCCeeeeeeccCCccceEEEeccccCCc-----------------eeEEEEeeecCc
Q 022818          152 EPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQ-----------------TTVLELTYNYGV  214 (291)
Q Consensus       152 ~~~~~v~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------~~~l~l~~~~~~  214 (291)
                      -++.|+.|.|+|+++|++||+++|||++......+..+..+.+...+....                 ...+........
T Consensus        22 ~~l~Hi~l~V~Dl~~si~FY~~vLG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  101 (176)
T d1qipa_          22 FLLQQTMLRVKDPKKSLDFYTRVLGMTLIQKCDFPIMKFSLYFLAYEDKNDIPKEKDEKIAWALSRKATLELTHNWGTED  101 (176)
T ss_dssp             CEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEETTTTEEEEEEESCCGGGSCSSHHHHHHHHTTSSSEEEEEEETTGGG
T ss_pred             eEEeEEEEEeCCHHHHHHHHHHhhCCeEeeeecccCCceEEEEeecCCccccccccccccccccccccceeEEEeecccc
Confidence            358999999999999999999999999887766665555666554322110                 111111111100


Q ss_pred             c---e----eecCcceeEEEEEecchHHhHHHHHHHHHHhCCeeecCCccCCCCCceEEEEECCCCceEEEeechhh
Q 022818          215 T---E----YTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNEDF  284 (291)
Q Consensus       215 ~---~----~~~~~~~~hi~~~v~di~~~~~~l~~~~~~~G~~~~~~~~~~~~~~~~~~~~~DpdG~~iel~~~~~~  284 (291)
                      .   .    .....++.|++|.++|+++++++|    +++|+++..+|...+.  .+++||+|||||+|||+|+.+.
T Consensus       102 ~~~~~~~~~~~~~~g~~h~~~~~~d~~~~~~~l----~~~Gv~~~~~p~~g~~--~~~~f~~DPdG~~IElvq~~~~  172 (176)
T d1qipa_         102 DETQSYHNGNSDPRGFGHIGIAVPDVYSACKRF----EELGVKFVKKPDDGKM--KGLAFIQDPDGYWIEILNPNKM  172 (176)
T ss_dssp             CTTCCCBCSSSSSCBEEEEEEECSCHHHHHHHH----HHTTCEEEECTTSSSS--TTCEEEECTTCCEEEEECTTTG
T ss_pred             ccCcCccCCCCCccceeEEEeeHHHHHHHHHHH----HHCCCEEeeCCccCCc--eEEEEEECCCCCEEEEEeCCCC
Confidence            0   0    112248899999999999999999    9999999998876544  4678999999999999999764

>d1lgta1 d.32.1.3 (A:2-132) 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme) {Burkholderia cepacia, formerly Pseudomonas cepacia [TaxId: 292]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme)
species: Burkholderia cepacia, formerly Pseudomonas cepacia [TaxId: 292]

Probab=99.74  E-value=1.2e-17  Score=121.67  Aligned_cols=113  Identities=16%  Similarity=0.198  Sum_probs=85.2

Q ss_pred             ceeeEEEEEEeCCHHHHHHHHHhhcCCEEEEEeecCCCceeEEEEecCCCCcceEEEeeecCCCCcccCCCCceEEEEEe
Q 022818           21 KRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIAT  100 (291)
Q Consensus        21 ~~~i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~~~~i~~~v  100 (291)
                      |++|+||+|.|+|++++.+||+++|||++..+..      ...+++.++....+.+  ...       ...+..|++|.|
T Consensus         2 I~~l~hv~i~V~Dl~~s~~FY~~vLG~~~~~~~~------~~~~l~~~~~~~~l~l--~~~-------~~~~~~h~~f~v   66 (131)
T d1lgta1           2 IRSLGYMGFAVSDVAAWRSFLTQKLGLMEAGTTD------NGDLFRIDSRAWRIAV--QQG-------EVDDLAFAGYEV   66 (131)
T ss_dssp             EEEEEEEEEEESCHHHHHHHHHHTTCCEEEEEET------TEEEEESSSBSCSEEE--EEC-------TTCEEEEEEEEE
T ss_pred             cccccEEEEEeCCHHHHHHHHHHhhCCceeecCC------cceEEeecCCceEEEE--ecC-------CCCCceEEEEEE
Confidence            7899999999999999999999999999987643      2466666543333333  222       123788999999


Q ss_pred             C---CHHHHHHHHHHcCCeeecCCeecC--CCceEEEEEECCCCCEEEEEeCC
Q 022818          101 E---DVYKLVENIRAKGGNVTREPGPLK--GGTTHIAFVKDPDGYIFELIQRG  148 (291)
Q Consensus       101 ~---d~~~~~~~l~~~G~~~~~~~~~~~--~g~~~~~~~~Dp~G~~iel~~~~  148 (291)
                      .   +++++.++|+++|+++...|....  .+...++||+||+||.||++...
T Consensus        67 ~~~~dl~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~f~DPdGn~iE~~~~~  119 (131)
T d1lgta1          67 ADAAGLAQMADKLKQAGIAVTTGDASLARRRGVTGLITFADPFGLPLEIYYGA  119 (131)
T ss_dssp             SSHHHHHHHHHHHHHTTCCCEECCHHHHHHHTCSEEEEEECTTSCEEEEEECC
T ss_pred             ccHHHHHHHHHHHHHcCCceEECCccccccCCceEEEEEECCCCCEEEEEeCC
Confidence            5   578899999999999887765431  23334589999999999998754

>d1sqda1 d.32.1.3 (A:14-180) 4-hydroxyphenylpyruvate dioxygenase, HppD {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.74  E-value=2.1e-17  Score=125.60  Aligned_cols=133  Identities=21%  Similarity=0.233  Sum_probs=97.1

Q ss_pred             CCCcceeeEEEEEEeCCHHHHHHHHHhhcCCEEEEEeecCCCceeEEEEecCCCCcceEEEeeecCC------------C
Q 022818           17 PKKDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYG------------V   84 (291)
Q Consensus        17 ~~~~~~~i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~------------~   84 (291)
                      .+..+.+|+||+|.|+|++++++||+++|||+...+...+.+......+..+.....+.+.......            .
T Consensus         6 ~~~~i~~~dHv~i~V~Dle~a~~fY~~~LGf~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~   85 (167)
T d1sqda1           6 DKFKVKRFHHIEFWCGDATNVARRFSWGLGMRFSAKSDLSTGNMVHASYLLTSGDLRFLFTAPYSPSLSAGEIKPTTTAS   85 (167)
T ss_dssp             CSSCEEEEEEEEEECSCHHHHHHHHHHHHTCEEEEEESGGGTCSSEEEEEEEETTEEEEEEEECCGGGTTTCCGGGCCCS
T ss_pred             CCCCCceEeEEEEEeCCHHHHHHHHHHHhCCeEEEEeeccCCCeeEEEEEeeCCCeeEEEeccccccccccccccccccc
Confidence            3466999999999999999999999999999998876654433223332222333333332221100            0


Q ss_pred             Cc-----------ccCCCCceEEEEEeCCHHHHHHHHHHcCCeeecCCeecCCCceEEEEEECCCCCEEEEEeCCCC
Q 022818           85 TS-----------YDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRGPT  150 (291)
Q Consensus        85 ~~-----------~~~g~~~~~i~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~Dp~G~~iel~~~~~~  150 (291)
                      .+           ...+.|+.||||.|+|+++++++|+++|+++..+|....+|.+ +++++.+.+..++|+++...
T Consensus        86 ~~~~~~~~~~~~~~~~~~G~~Hiaf~VdDi~aa~~~l~~~G~~~~~~P~~~~~~~~-~a~I~~~gd~~~~~v~r~~~  161 (167)
T d1sqda1          86 IPSFDHGSCRSFFSSHGLGVRAVAIEVEDAESAFSISVANGAIPSSPPIVLNEAVT-IAEVKLYGDVVLRYVSYKAE  161 (167)
T ss_dssp             STTCCHHHHHHHHHHHCSEEEEEEEEESCHHHHHHHHHHTTCCEEEEEEEETTTEE-EEEEEEETTEEEEEEEECCC
T ss_pred             cccCCcchHHHhhhccCCCceEEEEEeCCHHHHHHHHHHCCCEEecCCeecCCCEE-EEEEEccCCcEEEEEecCCC
Confidence            00           0135689999999999999999999999999999988876654 58899999999999998643

>d1sqia1 d.32.1.3 (A:8-156) 4-hydroxyphenylpyruvate dioxygenase, HppD {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.74  E-value=6.4e-18  Score=126.01  Aligned_cols=129  Identities=16%  Similarity=0.187  Sum_probs=94.5

Q ss_pred             CceEEEeeeCChhhhHHHHHHhcCCeeeeeeccCCccceEEEeccccCCceeEEEEeeecCcce-------eecCcceeE
Q 022818          153 PLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTE-------YTKGNAYAQ  225 (291)
Q Consensus       153 ~~~~v~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~-------~~~~~~~~h  225 (291)
                      +++||.|.|+|+++|++||+++|||+++.....+.............+  ...+++........       ...+.++.|
T Consensus        11 ~~dHi~i~V~Dl~~a~~fY~~~lGf~~~~~~~~~~~~~~~~~~~~~~~--~~~~~l~~~~~~~~~~~~~~~~~~g~G~~h   88 (149)
T d1sqia1          11 HFHSVTFWVGNAKQAASFYCNKMGFEPLAYKGLETGSREVVSHVIKQG--KIVFVLCSALNPWNKEMGDHLVKHGDGVKD   88 (149)
T ss_dssp             EEEEEEEECSCHHHHHHHHHHHHCCEEEEEESGGGTCCSEEEEEEEET--TEEEEEEEESSTTCHHHHHHHHHHCSEEEE
T ss_pred             eEeEEEEEcCCHHHHHHHHhhccceEEEEEecccCCceEEEEEEecCC--cEEEEEEeccCCCCchhhhhhhhCCCeEEE
Confidence            588999999999999999999999998876654433222222221122  34455544332211       125679999


Q ss_pred             EEEEecchHHhHHHHHHHHHHhCCeeecCCccCCCCC--ceEEEEECCCCceEEEeechhhhhh
Q 022818          226 VAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLN--TKITSFVDPDGWKTVLVDNEDFLKE  287 (291)
Q Consensus       226 i~~~v~di~~~~~~l~~~~~~~G~~~~~~~~~~~~~~--~~~~~~~DpdG~~iel~~~~~~~~~  287 (291)
                      |||.|+|+++++++|    +++|++++.+|.......  .++++++.|+|..++|+|++.+.++
T Consensus        89 iaf~V~di~~~~~~l----~~~G~~~~~~P~~~~d~~G~v~~a~i~~~g~~~~~lier~~~~g~  148 (149)
T d1sqia1          89 IAFEVEDCEHIVQKA----RERGAKIVREPWVEEDKFGKVKFAVLQTYGDTTHTLVEKINYTGR  148 (149)
T ss_dssp             EEEEEECHHHHHHHH----HHHTCCEEEEEEEEEETTEEEEEEEEECSTTCEEEEEEEESCCSS
T ss_pred             EEEEeccHHHHHHHH----HHCCCEEccCCeEEECCCCeEEEEEEECCCCCEEEEEEeCCCcCC
Confidence            999999999999999    999999999886643222  2568889999999999999988764

>d1xqaa_ d.32.1.2 (A:) Hypothetical protein BC3580 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Hypothetical protein BC3580
species: Bacillus cereus [TaxId: 1396]

Probab=99.73  E-value=2.1e-17  Score=117.13  Aligned_cols=111  Identities=16%  Similarity=0.160  Sum_probs=76.9

Q ss_pred             CCceEEEeeeCChhhhHHHHHHhcCCeeeeeeccCCccceEEEeccccCCceeEEEEeeecCcceeecCcceeEEEEEec
Q 022818          152 EPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTD  231 (291)
Q Consensus       152 ~~~~~v~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~hi~~~v~  231 (291)
                      ++|.||.|.|+|++++.+||+++|||++..+.+   .  ..++...+.   ...+.+......    ..++..|++|.|+
T Consensus         2 m~i~Hi~l~v~Dl~~a~~FY~~~lG~~~~~~~~---~--~~~~~~~~~---~~~~~~~~~~~~----~~~~~~h~~f~v~   69 (113)
T d1xqaa_           2 MGIKHLNLTVADVVAAREFLEKYFGLTCSGTRG---N--AFAVMRDND---GFILTLMKGKEV----QYPKTFHVGFPQE   69 (113)
T ss_dssp             CCCCEEEEEESCHHHHHHHHHHHHCCEEEEEET---T--TEEEEECTT---CCEEEEEECSSC----CCCTTCCEEEECS
T ss_pred             CcccEEEEEeCCHHHHHHHHHHhhCCEEEEeec---C--cceeeeecc---eeeeeeeeeecc----cccccceeeeeec
Confidence            579999999999999999999999999876543   1  223333222   344555433222    2346789999998


Q ss_pred             chHHhHHHHHHHHHHhCCeeecCCccCCCCCceEEEEECCCCceEEEe
Q 022818          232 DVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLV  279 (291)
Q Consensus       232 di~~~~~~l~~~~~~~G~~~~~~~~~~~~~~~~~~~~~DpdG~~iel~  279 (291)
                      |.+ .++++.++++++|+++..+|..    +++.+||+|||||+|||+
T Consensus        70 ~~~-~v~~~~~~l~~~G~~~~~~~~~----~~~~~~~~DPdG~~iEi~  112 (113)
T d1xqaa_          70 SEE-QVDKINQRLKEDGFLVEPPKHA----HAYTFYVEAPGGFTIEVM  112 (113)
T ss_dssp             SHH-HHHHHHHHHHHTTCCCCCCEEC-----CEEEEEEETTTEEEEEE
T ss_pred             ccc-chhhhhhhHHHcCCccccCCCC----ceEEEEEECCCCCEEEEE
Confidence            833 3333334449999997655442    357899999999999985

>d1xqaa_ d.32.1.2 (A:) Hypothetical protein BC3580 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Hypothetical protein BC3580
species: Bacillus cereus [TaxId: 1396]

Probab=99.73  E-value=2.5e-17  Score=116.70  Aligned_cols=108  Identities=19%  Similarity=0.269  Sum_probs=77.7

Q ss_pred             eeeEEEEEEeCCHHHHHHHHHhhcCCEEEEEeecCCCceeEEEEecCCCCcceEEEeeecCCCCcccCCCCceEEEEEeC
Q 022818           22 RRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIATE  101 (291)
Q Consensus        22 ~~i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~~~~i~~~v~  101 (291)
                      |+|+||.|.|+|++++.+||+++|||++..+..   +  ..+++. ++.  ...+.+......    ..++..|++|.|+
T Consensus         2 m~i~Hi~l~v~Dl~~a~~FY~~~lG~~~~~~~~---~--~~~~~~-~~~--~~~~~~~~~~~~----~~~~~~h~~f~v~   69 (113)
T d1xqaa_           2 MGIKHLNLTVADVVAAREFLEKYFGLTCSGTRG---N--AFAVMR-DND--GFILTLMKGKEV----QYPKTFHVGFPQE   69 (113)
T ss_dssp             CCCCEEEEEESCHHHHHHHHHHHHCCEEEEEET---T--TEEEEE-CTT--CCEEEEEECSSC----CCCTTCCEEEECS
T ss_pred             CcccEEEEEeCCHHHHHHHHHHhhCCEEEEeec---C--cceeee-ecc--eeeeeeeeeecc----cccccceeeeeec
Confidence            689999999999999999999999999976643   1  123333 232  233444433222    2236789999998


Q ss_pred             C---HHHHHHHHHHcCCeeecCCeecCCCceEEEEEECCCCCEEEEE
Q 022818          102 D---VYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELI  145 (291)
Q Consensus       102 d---~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~Dp~G~~iel~  145 (291)
                      |   +++++++++++|+++...|.  .+ .. .+|++||+||+||+.
T Consensus        70 ~~~~v~~~~~~l~~~G~~~~~~~~--~~-~~-~~~~~DPdG~~iEi~  112 (113)
T d1xqaa_          70 SEEQVDKINQRLKEDGFLVEPPKH--AH-AY-TFYVEAPGGFTIEVM  112 (113)
T ss_dssp             SHHHHHHHHHHHHHTTCCCCCCEE--C--CE-EEEEEETTTEEEEEE
T ss_pred             cccchhhhhhhHHHcCCccccCCC--Cc-eE-EEEEECCCCCEEEEE
Confidence            7   67789999999998765433  22 23 489999999999986

>d1nkia_ d.32.1.2 (A:) Fosfomycin resistance protein A (FosA) {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Fosfomycin resistance protein A (FosA)
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.73  E-value=4.4e-17  Score=119.13  Aligned_cols=112  Identities=22%  Similarity=0.333  Sum_probs=79.1

Q ss_pred             cceeeEEEEEEeCCHHHHHHHHHhhcCCEEEEEeecCCCceeEEEEecCCCCcceEEEeeecCCCCcccCCCCceEEEEE
Q 022818           20 DKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIA   99 (291)
Q Consensus        20 ~~~~i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~~~~i~~~   99 (291)
                      |+.+|+||+|.|+|++++.+||+++||+++..+.+.      ..++..++.    .+.........  ....+..|++|.
T Consensus         1 mi~~i~Hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~------~~~~~~~~~----~~~~~~~~~~~--~~~~~~~h~~~~   68 (134)
T d1nkia_           1 MLTGLNHLTLAVADLPASIAFYRDLLGFRLEARWDQ------GAYLELGSL----WLCLSREPQYG--GPAADYTHYAFG   68 (134)
T ss_dssp             CEEEEEEEEEEESCHHHHHHHHHHTTCCEEEEEETT------EEEEEETTE----EEEEEECTTCC--CCCSSSCEEEEE
T ss_pred             CCCcEeEEEEEeCCHHHHHHHHHHhhCCeEEEeccc------eeeeecCCe----EEEEeeecccc--ccccccccchhc
Confidence            689999999999999999999999999998876541      344544432    22222221111  122345566655


Q ss_pred             e--CCHHHHHHHHHHcCCeeecCCeecCCCceEEEEEECCCCCEEEEEeC
Q 022818          100 T--EDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQR  147 (291)
Q Consensus       100 v--~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~Dp~G~~iel~~~  147 (291)
                      +  +|+++++++|+++|+++...+.   ++.. .+||+|||||+|||...
T Consensus        69 ~~~~dl~~~~~~l~~~G~~~~~~~~---~~~~-~~~f~DPdGn~iEl~~~  114 (134)
T d1nkia_          69 IAAADFARFAAQLRAHGVREWKQNR---SEGD-SFYFLDPDGHRLEAHVG  114 (134)
T ss_dssp             ECHHHHHHHHHHHHHTTCCEEECCC---SSSC-EEEEECTTCCEEEEESC
T ss_pred             cccchHHHHHHHHHHCCCcCccCCC---ccee-EEEEECCCCCEEEEEEC
Confidence            5  7899999999999998765432   2223 48999999999999754

>d1npba_ d.32.1.2 (A:) Fosfomycin resistance protein A (FosA) {Serratia marcescens [TaxId: 615]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Fosfomycin resistance protein A (FosA)
species: Serratia marcescens [TaxId: 615]

Probab=99.73  E-value=6.6e-17  Score=119.08  Aligned_cols=116  Identities=20%  Similarity=0.330  Sum_probs=83.4

Q ss_pred             cceeeEEEEEEeCCHHHHHHHHHhhcCCEEEEEeecCCCceeEEEEecCCCCcceEEEeeecCCCCcccCCCCceEEEEE
Q 022818           20 DKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIA   99 (291)
Q Consensus        20 ~~~~i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~~~~i~~~   99 (291)
                      |+++|+||.|.|+|++++.+||+++|||++.....      ...++..++  ....+.+....... .....+..|++|.
T Consensus         1 Mi~~l~Hi~l~v~d~~~~~~FY~~vLG~~~~~~~~------~~~~~~~~~--~~~~l~~~~~~~~~-~~~~~~~~h~~~~   71 (140)
T d1npba_           1 MLQSLNHLTLAVSDLQKSVTFWHELLGLTLHARWN------TGAYLTCGD--LWVCLSYDEARQYV-PPQESDYTHYAFT   71 (140)
T ss_dssp             CCCEEEEEEEEESCHHHHHHHHHTTSCCEEEEEET------TEEEEEETT--EEEEEEECTTCCCC-CGGGSCSCEEEEE
T ss_pred             CCCcEeEEEEEeCCHHHHHHHHHHHhCCEEEEEec------ccccccccc--ccceeecccccccC-CCcCCccceeeee
Confidence            68999999999999999999999999999976543      123444433  22333333222221 2233467788888


Q ss_pred             e--CCHHHHHHHHHHcCCeeecCCeecCCCceEEEEEECCCCCEEEEEeCC
Q 022818          100 T--EDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRG  148 (291)
Q Consensus       100 v--~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~Dp~G~~iel~~~~  148 (291)
                      +  +|+++++++|+++|+++...+.   ++.. .+||+|||||.|||....
T Consensus        72 ~~~~d~~~~~~~l~~~Gv~~~~~~~---~~~~-~~~~~DPdGn~iEi~~~~  118 (140)
T d1npba_          72 VAEEDFEPLSQRLEQAGVTIWKQNK---SEGA-SFYFLDPDGHKLELHVGS  118 (140)
T ss_dssp             CCHHHHHHHHHHHHHTTCCEEECCC---SSSE-EEEEECTTCCEEEEEECC
T ss_pred             chHHHHHHHHHHHHHCCCeEeecCC---CCce-EEEEECCCCCEEEEEECC
Confidence            7  6799999999999998876543   3333 489999999999997654

>d1t47a1 d.32.1.3 (A:16-178) 4-hydroxyphenylpyruvate dioxygenase, HppD {Streptomyces avermitilis [TaxId: 33903]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Streptomyces avermitilis [TaxId: 33903]

Probab=99.73  E-value=2.7e-17  Score=124.41  Aligned_cols=127  Identities=22%  Similarity=0.273  Sum_probs=94.4

Q ss_pred             CcceeeEEEEEEeCCHHHHHHHHHhhcCCEEEEEeecCCCc--eeEEEEecCCCCcceEEEeeecCCCC----------c
Q 022818           19 KDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEK--YSNAFLGFGPEQSHFVVELTYNYGVT----------S   86 (291)
Q Consensus        19 ~~~~~i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~~~~~~~~----------~   86 (291)
                      ..+++|+||+|.|+|+++|++||+++|||+++.........  ...+.+..+  ...+  .+.......          .
T Consensus         3 ~~i~~idHv~i~V~D~~~a~~fY~~~lGf~~v~~~~~~~~~~~~~~~~l~~~--~~~i--~l~~~~~~~~~~~~~~~~~~   78 (163)
T d1t47a1           3 FPVKGMDAVVFAVGNAKQAAHYYSTAFGMQLVAYSGPENGSRETASYVLTNG--SARF--VLTSVIKPATPWGHFLADHV   78 (163)
T ss_dssp             SCCCEEEEEEEECSCHHHHHHHHHHTSCCEEEEEESGGGTCCSEEEEEEEET--TEEE--EEEEESSCCSHHHHHHHHHH
T ss_pred             CCCceEeEEEEEeCCHHHHHHHHHHHhCCeEEeeecccccceeEEEEEEecC--CEEE--EEeccCCCCCccccccchhh
Confidence            35899999999999999999999999999998876544332  233444432  3333  333322111          0


Q ss_pred             ccCCCCceEEEEEeCCHHHHHHHHHHcCCeeecCCeecC--CCceEEEEEECCCCCEEEEEeCCC
Q 022818           87 YDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLK--GGTTHIAFVKDPDGYIFELIQRGP  149 (291)
Q Consensus        87 ~~~g~~~~~i~~~v~d~~~~~~~l~~~G~~~~~~~~~~~--~g~~~~~~~~Dp~G~~iel~~~~~  149 (291)
                      ...+.|+.||||+|+|+++++++|+++|+++..+|....  .|...++++++|+|..++|++...
T Consensus        79 ~~~g~G~~hiaf~VdDid~a~~~l~~~Ga~~~~~P~~~~d~~G~v~~a~I~~~g~~~~~lier~~  143 (163)
T d1t47a1          79 AEHGDGVVDLAIEVPDARAAHAYAIEHGARSVAEPYELKDEHGTVVLAAIATYGKTRHTLVDRTG  143 (163)
T ss_dssp             HHHCSEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEEEETTEEEEEEEEECSTTCEEEEEEEEE
T ss_pred             hcCCCceEEEEEeeCCHHHHHHHHHHCCCeEEecCcceeCCCCEEEEEEEecCCCceEEEEeccC
Confidence            124678999999999999999999999999988877653  344556889999999999999764

>d1mpya1 d.32.1.3 (A:1-145) Catechol 2,3-dioxygenase (metapyrocatechase) {Pseudomonas putida, mt2 [TaxId: 303]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Catechol 2,3-dioxygenase (metapyrocatechase)
species: Pseudomonas putida, mt2 [TaxId: 303]

Probab=99.73  E-value=1.3e-17  Score=123.71  Aligned_cols=119  Identities=21%  Similarity=0.276  Sum_probs=82.3

Q ss_pred             CcceeeEEEEEEeCCHHHHHHHHHhhcCCEEEEEeecCCCceeEEEEecCCCCcceEEEeeecCCCCcccCCCCceEEEE
Q 022818           19 KDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAI   98 (291)
Q Consensus        19 ~~~~~i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~~~~i~~   98 (291)
                      +.|++|+||.|.|+|++++.+||+++|||++..+....     ..+...........+.+....       ..+..|+++
T Consensus         3 ~~i~rl~Hv~l~v~D~~~s~~FY~~vLG~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~   70 (145)
T d1mpya1           3 KGVMRPGHVQLRVLDMSKALEHYVELLGLIEMDRDDQG-----RVYLKAWTEVDKFSLVLREAD-------EPGMDFMGF   70 (145)
T ss_dssp             TSEEEEEEEEEEESCHHHHHHHHHHTTCCEEEEECTTS-----CEEEECTTCCBSCSEEEEECS-------SCEEEEEEE
T ss_pred             cCCcEeeeEEEEeCCHHHHHHHHHHhhCCEEEEeeccC-----ccceecccccceeeccccccC-------cccceeeee
Confidence            45899999999999999999999999999988653321     122222222222223232221       124455555


Q ss_pred             Ee---CCHHHHHHHHHHcCCeeecCCeecCCCceEEEEEECCCCCEEEEEeCCC
Q 022818           99 AT---EDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRGP  149 (291)
Q Consensus        99 ~v---~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~Dp~G~~iel~~~~~  149 (291)
                      .+   +|+++++++|+++|+++...|.....|..+.+||+||+||.|||+....
T Consensus        71 ~~~~~~dl~~~~~~L~~~g~~~~~~~~~~~~g~~~~~~f~DPdG~~iEl~~~~e  124 (145)
T d1mpya1          71 KVVDEDALRQLERDLMAYGCAVEQLPAGELNSCGRRVRFQAPSGHHFELYADKE  124 (145)
T ss_dssp             EESCHHHHHHHHHHHHHHTCCCEEECTTSSTTBCCEEEEECTTSCEEEEESCBC
T ss_pred             eehhHHHHHHHHHHHHHCCCcEEECCCcccCCceEEEEEECCCCCEEEEEEecc
Confidence            55   6799999999999999876655544444445999999999999987543

>d1f1ua2 d.32.1.3 (A:148-323) Homoprotocatechuate 2,3-dioxygenase {Arthrobacter globiformis [TaxId: 1665]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Homoprotocatechuate 2,3-dioxygenase
species: Arthrobacter globiformis [TaxId: 1665]

Probab=99.72  E-value=4.4e-17  Score=124.64  Aligned_cols=122  Identities=18%  Similarity=0.169  Sum_probs=87.8

Q ss_pred             CCCceEEEeeeCChhhhHHHHHHhcCCeeeeeeccCCccceEEEeccccCCceeEEEEeeecCcceeecCcceeEEEEEe
Q 022818          151 PEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAIST  230 (291)
Q Consensus       151 ~~~~~~v~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~hi~~~v  230 (291)
                      ..+|+||+|.|+|++++++|| ++|||++.++....++....+++..+..  ...+.+..       ...++..|++|.+
T Consensus         3 i~rl~Hv~l~v~Dle~s~~FY-e~LGf~~~d~~~~~~~~~~~~~~~~~~~--~~~l~~~~-------~~~~~~~H~~f~~   72 (176)
T d1f1ua2           3 LVRLDHFNQVTPDVPRGRAYL-EDLGFRVSEDIKDSDGVTYAAWMHRKQT--VHDTALTG-------GNGPRMHHVAFAT   72 (176)
T ss_dssp             CCEEEEEEEEESCHHHHHHHH-HHTTCEEEEEEECTTCCEEEEEEESSSS--SCSEEEEE-------SSBSEEEEEEEEC
T ss_pred             eeEeeeEEEEcCCHHHHHHHH-HHCCCEEEEEEecCCcceeeeeeccCcc--ccceeccc-------ccCCCccceeEEe
Confidence            467999999999999999999 6899999887776666556666664332  33344332       1235789999999


Q ss_pred             cchHHhHHHHHHHHHHhCCe--eecCCccCCCCCceEEEEECCCCceEEEeechh
Q 022818          231 DDVYKSAEVVNLVTQELGGK--ITRQPGSIPGLNTKITSFVDPDGWKTVLVDNED  283 (291)
Q Consensus       231 ~di~~~~~~l~~~~~~~G~~--~~~~~~~~~~~~~~~~~~~DpdG~~iel~~~~~  283 (291)
                      .++++..+.+ .+++++|+.  ....|.++..+...++||+|||||+|||.....
T Consensus        73 ~~~~~v~~~~-~~l~~~g~~~~~~~~p~~h~~g~~~~~Y~~DPdG~~iEl~~~~~  126 (176)
T d1f1ua2          73 HEKHNIIQIC-DKMGALRISDRIERGPGRHGVSNAFYLYILDPDGHRIEIYTQDY  126 (176)
T ss_dssp             SSHHHHHHHH-HHHHHTTCGGGEEEEEEECSTTCCEEEEEECTTCCEEEEEECCC
T ss_pred             ccchhHHHHH-HHHHHcCCceeeeecccccCCCCceEEEEECCCCCEEEEEeCCc
Confidence            8755544332 334888985  345666665545678999999999999987543

>d1f1ua1 d.32.1.3 (A:2-147) Homoprotocatechuate 2,3-dioxygenase {Arthrobacter globiformis [TaxId: 1665]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Homoprotocatechuate 2,3-dioxygenase
species: Arthrobacter globiformis [TaxId: 1665]

Probab=99.72  E-value=2.9e-17  Score=121.94  Aligned_cols=117  Identities=21%  Similarity=0.200  Sum_probs=84.1

Q ss_pred             CCceEEEeeeCChhhhHHHHHHhcCCeeeeeeccCCccceEEEeccccCCceeEEEEeeecCcceeecCcceeEEEEEec
Q 022818          152 EPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTD  231 (291)
Q Consensus       152 ~~~~~v~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~hi~~~v~  231 (291)
                      .+|.||.|.|+|++++++||+++|||++.....   .  ...+... .......+.+..       ...++..|++|.+.
T Consensus        15 ~rl~hv~l~v~Dl~~s~~FY~~~lG~~~~~~~~---~--~~~~~~~-~~~~~~~~~~~~-------~~~~~~~h~~~~~~   81 (146)
T d1f1ua1          15 VRCAYMEIVVTDLAKSREFYVDVLGLHVTEEDE---N--TIYLRSL-EEFIHHNLVLRQ-------GPIAAVAAFAYRVK   81 (146)
T ss_dssp             EEEEEEEEEESCHHHHHHHHTTTTCCEEEEECS---S--EEEEECT-TCCSSCSEEEEE-------CSSCEEEEEEEEES
T ss_pred             cEEeEEEEEeCCHHHHHHHHHhccCcEEEeecC---C--ceeeecc-cccccceeeccc-------cCCCCCceeeEeec
Confidence            468999999999999999999999999876532   1  2222221 221222222222       22357889999997


Q ss_pred             c---hHHhHHHHHHHHHHhCCeeecCCccCCCCCceEEEEECCCCceEEEeechhhh
Q 022818          232 D---VYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNEDFL  285 (291)
Q Consensus       232 d---i~~~~~~l~~~~~~~G~~~~~~~~~~~~~~~~~~~~~DpdG~~iel~~~~~~~  285 (291)
                      +   ++++.++|    +++|+++...+.....+.++++||+|||||+|||+...+..
T Consensus        82 ~~~dl~~~~~~l----~~~G~~~~~~~~~~~~g~~~~~~~~DPdG~~iEl~~~~e~~  134 (146)
T d1f1ua1          82 SPAEVDAAEAYY----KELGCRTERRKEGFTKGIGDSVRVEDPLGFPYEFFYETEHV  134 (146)
T ss_dssp             SHHHHHHHHHHH----HHTTCCEEEETTCSSTTBCSEEEEECTTSCEEEEECCBCCC
T ss_pred             cchhHHHHHHHH----HHcCCceeeccccccCCceEEEEEECCCCcEEEEEEecccc
Confidence            5   55566666    99999998888777665568899999999999998765443

>d1kw3b1 d.32.1.3 (B:1-132) 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme) {Pseudomonas sp. [TaxId: 306]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme)
species: Pseudomonas sp. [TaxId: 306]

Probab=99.72  E-value=2.8e-17  Score=119.82  Aligned_cols=113  Identities=15%  Similarity=0.162  Sum_probs=85.3

Q ss_pred             ceeeEEEEEEeCCHHHHHHHHHhhcCCEEEEEeecCCCceeEEEEecCCCCcceEEEeeecCCCCcccCCCCceEEEEEe
Q 022818           21 KRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIAT  100 (291)
Q Consensus        21 ~~~i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~~~~i~~~v  100 (291)
                      |++|+||+|.|+|++++.+||+++|||++..+..      ...++..++....+.+.  ..       ...+..|++|.|
T Consensus         2 i~~L~hv~i~v~Dl~~s~~FY~~vLG~~~~~~~~------~~~~l~~~~~~~~l~~~--~~-------~~~~~~h~~f~v   66 (132)
T d1kw3b1           2 IERLGYLGFAVKDVPAWDHFLTKSVGLMAAGSAG------DAALYRADQRAWRIAVQ--PG-------ELDDLAYAGLEV   66 (132)
T ss_dssp             CCEEEEEEEEESCHHHHHHHHHHTTCCEEEEEET------TEEEEESSSBSCSEEEE--EC-------TTCEEEEEEEEC
T ss_pred             cccccEEEEEeCCHHHHHHHHHHHhCCceecccc------ceeeeeeeecceeeeee--cc-------CCCCceEEEEEe
Confidence            7899999999999999999999999999876643      24667665443333332  21       223789999999


Q ss_pred             C---CHHHHHHHHHHcCCeeecCCeecCC--CceEEEEEECCCCCEEEEEeCC
Q 022818          101 E---DVYKLVENIRAKGGNVTREPGPLKG--GTTHIAFVKDPDGYIFELIQRG  148 (291)
Q Consensus       101 ~---d~~~~~~~l~~~G~~~~~~~~~~~~--g~~~~~~~~Dp~G~~iel~~~~  148 (291)
                      .   |++++.++++++|+++...+.....  +....+||+||+||.|||+...
T Consensus        67 ~~~~dl~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~DPdGn~iE~~~~~  119 (132)
T d1kw3b1          67 DDAAALERMADKLRQAGVAFTRGDEALMQQRKVMGLLCLQDPFGLPLEIYYGP  119 (132)
T ss_dssp             SSHHHHHHHHHHHHHHTCCCEECCHHHHHHHTCSEEEEEECTTSCEEEEEECC
T ss_pred             ccHHHHHHHHHHHHHcCCCceecCccccccCCcceEEEEECCCCCEEEEEECC
Confidence            5   5788999999999998876654321  2223489999999999998764

>d2pjsa1 d.32.1.2 (A:3-113) Uncharacterized protein Atu1953 {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Uncharacterized protein Atu1953
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=99.72  E-value=2.1e-17  Score=116.64  Aligned_cols=110  Identities=21%  Similarity=0.277  Sum_probs=81.0

Q ss_pred             eeeEEEEEEeCCHHHHHHHHHhhcCCEEEEEeecCCCceeEEEEecCCCCcceEEEeeecCCCCcccCCCCceEEEEEeC
Q 022818           22 RRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIATE  101 (291)
Q Consensus        22 ~~i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~~~~i~~~v~  101 (291)
                      +++ +..|.|+|++++++||+++|||+.....+    .  ...+..++. ....+.......     .+.+..|++|.++
T Consensus         2 ~ri-~~~l~v~d~~~a~~FY~~~lG~~~~~~~~----~--~~~~~~~~~-~~~~~~~~~~~~-----~~~~~~~~~~~~~   68 (111)
T d2pjsa1           2 RRV-VANIATPEPARAQAFYGDILGMPVAMDHG----W--IVTHASPLE-AHAQVSFAREGG-----SGTDVPDLSIEVD   68 (111)
T ss_dssp             EEE-EEEEECSCGGGGHHHHTTTTCCCEEEECS----S--EEEEEEEEE-EEEEEEEESSSB-----TTBCCCSEEEEES
T ss_pred             eEE-EEEEEeCCHHHHHHHHHHhhCCceeeccc----c--eeEeccccc-cceeeecccccC-----CCCceeEEEEEec
Confidence            455 58899999999999999999999876543    1  222322221 111222211111     2235568999999


Q ss_pred             CHHHHHHHHHHcCCeeecCCeecCCCceEEEEEECCCCCEEEEE
Q 022818          102 DVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELI  145 (291)
Q Consensus       102 d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~Dp~G~~iel~  145 (291)
                      |+++++++++++|+++..+|...++|.+. ++++||+||+||++
T Consensus        69 dvd~~~~~l~~~g~~~~~~p~~~~~g~~~-~~~~DP~Gn~iei~  111 (111)
T d2pjsa1          69 NFDEVHARILKAGLPIEYGPVTEAWGVQR-LFLRDPFGKLINIL  111 (111)
T ss_dssp             CHHHHHHHHHHTTCCCSEEEEECTTSCEE-EEEECTTSCEEEEE
T ss_pred             CHHHHHHHHHhhccccccCCeEcCCCcEE-EEEECCCCCEEEeC
Confidence            99999999999999999999999988765 89999999999985

>d1twua_ d.32.1.8 (A:) Hypothetical protein YycE {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Hypothetical protein YycE
domain: Hypothetical protein YycE
species: Bacillus subtilis [TaxId: 1423]

Probab=99.72  E-value=4.6e-17  Score=119.46  Aligned_cols=118  Identities=16%  Similarity=0.274  Sum_probs=84.5

Q ss_pred             EEEEeCCHHHHHHHHHhhcCCEEEEEeecCCCceeEEEEecCCCCcceEEEeeecCCCCcccCCCCceEEEEEeCC---H
Q 022818           27 AVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIATED---V  103 (291)
Q Consensus        27 v~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~~~~i~~~v~d---~  103 (291)
                      |.+.|+|++++++||+++|||++..+..... .+..+++..++.  .+.+.+...........+.+..|++|.|++   +
T Consensus        13 Va~pv~Dle~s~~FY~~vLG~~~~~~~~~~~-~~~~~~~~~~~~--~~~l~~~~~~~~~~~~~~~~~~hlaf~v~~~~dv   89 (137)
T d1twua_          13 IARPTGQLDEIIRFYEEGLCLKRIGEFSQHN-GYDGVMFGLPHA--DYHLEFTQYEGGSTAPVPHPDSLLVFYVPNAVEL   89 (137)
T ss_dssp             EEEECSCHHHHHHHHTTTSCCCEEEEEEEET-TEEEEEEESSSS--SEEEEEEEETTCCCCCCCCTTCEEEEECCCHHHH
T ss_pred             EecccCCHHHHHHHHHhccCCceeeeecccc-ceeEEEecCCCC--ceeeecccccccccccccccCceEEEEeCCHHHH
Confidence            4445689999999999999999987655433 345566665443  344555554444433344567899999876   7


Q ss_pred             HHHHHHHHHcCCeeecCCeecCCCceEEEEEECCCCCEEEEEeCCC
Q 022818          104 YKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRGP  149 (291)
Q Consensus       104 ~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~Dp~G~~iel~~~~~  149 (291)
                      ++++++|+++|+++..++.. .++.. .+||+||||++|||+....
T Consensus        90 ~~~~~~l~~~G~~~~~~~~~-~~~~~-~~~f~DPDG~~Iel~~~~~  133 (137)
T d1twua_          90 AAITSKLKHMGYQEVESENP-YWSNG-GVTIEDPDGWRIVFMNSKG  133 (137)
T ss_dssp             HHHHHHHHHTTCCEECCSSH-HHHSS-EEEEECTTCCEEEEESSCC
T ss_pred             HHHHHHHHHCCCeEeCCCCC-CCCce-EEEEECCCCCEEEEEcCCC
Confidence            88899999999998876543 33333 3899999999999997653

>d1r9ca_ d.32.1.2 (A:) Fosfomycin resistance protein FosX {Mesorhizobium loti [TaxId: 381]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Fosfomycin resistance protein FosX
species: Mesorhizobium loti [TaxId: 381]

Probab=99.72  E-value=4.3e-17  Score=118.47  Aligned_cols=117  Identities=18%  Similarity=0.216  Sum_probs=81.7

Q ss_pred             CceEEEeeeCChhhhHHHHHHhcCCeeeeeeccCCc-cceEEEeccccCCceeEEEEeeecCcceeecCcceeEEEEEec
Q 022818          153 PLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEY-KYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTD  231 (291)
Q Consensus       153 ~~~~v~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~hi~~~v~  231 (291)
                      +|.|++|.|+|++++++||+++|||++....+.... .....++..+    ...+.+....+    ....+..|++|.++
T Consensus         4 ~i~Hi~l~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~----~~~~~~~~~~f~v~   75 (130)
T d1r9ca_           4 GLSHMTFIVRDLERMTRILEGVFDAREVYASDTEQFSLSREKFFLIG----DIWVAIMQGEK----LAERSYNHIAFKID   75 (130)
T ss_dssp             EEEEEEEEESCHHHHHHHHHHHHCCEEEEEGGGSTTCCSCEEEEEET----TEEEEEEECCC----CSSCCSCEEEEECC
T ss_pred             cEeEEEEEeCCHHHHHHHHHHhcCCEEEEEcCCccccceeEEEEecC----CEEEeeccccc----ccccceeeeeeccc
Confidence            589999999999999999999999998876554322 1223333321    23444433222    12346679999875


Q ss_pred             --chHHhHHHHHHHHHHhCCeeecCCccCCCCCceEEEEECCCCceEEEeech
Q 022818          232 --DVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNE  282 (291)
Q Consensus       232 --di~~~~~~l~~~~~~~G~~~~~~~~~~~~~~~~~~~~~DpdG~~iel~~~~  282 (291)
                        |+++++++|    +++|+++..++....+ +++.+||+|||||+|||....
T Consensus        76 ~~dv~~~~~~l----~~~gv~i~~~~~~~~~-~~~~~~~~DPdGn~iEl~~~~  123 (130)
T d1r9ca_          76 DADFDRYAERV----GKLGLDMRPPRPRVEG-EGRSIYFYDDDNHMFELHTGT  123 (130)
T ss_dssp             GGGHHHHHHHH----HHHTCCBCCCCC------CCEEEEECTTSCEEEEECCC
T ss_pred             HHHHHHHHHHH----HHCCCeEecCCcccCC-CEEEEEEECCCCCEEEEEECC
Confidence              688888888    9999998776655443 458899999999999998765

>d2pjsa1 d.32.1.2 (A:3-113) Uncharacterized protein Atu1953 {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Uncharacterized protein Atu1953
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=99.72  E-value=3.3e-17  Score=115.62  Aligned_cols=107  Identities=16%  Similarity=0.124  Sum_probs=79.2

Q ss_pred             EEEeeeCChhhhHHHHHHhcCCeeeeeeccCCccceEEEeccccCCceeEEEEeeecCcceeecCcceeEEEEEecchHH
Q 022818          156 QVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDVYK  235 (291)
Q Consensus       156 ~v~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~hi~~~v~di~~  235 (291)
                      +.+|.|+|++++++||+++|||++....+.    +..+ .. +..  ...+.......    ..+++..|++|.++|+++
T Consensus         5 ~~~l~v~d~~~a~~FY~~~lG~~~~~~~~~----~~~~-~~-~~~--~~~~~~~~~~~----~~~~~~~~~~~~~~dvd~   72 (111)
T d2pjsa1           5 VANIATPEPARAQAFYGDILGMPVAMDHGW----IVTH-AS-PLE--AHAQVSFAREG----GSGTDVPDLSIEVDNFDE   72 (111)
T ss_dssp             EEEEECSCGGGGHHHHTTTTCCCEEEECSS----EEEE-EE-EEE--EEEEEEEESSS----BTTBCCCSEEEEESCHHH
T ss_pred             EEEEEeCCHHHHHHHHHHhhCCceeecccc----eeEe-cc-ccc--cceeeeccccc----CCCCceeEEEEEecCHHH
Confidence            567999999999999999999998765431    2222 22 111  11111111111    234466799999999999


Q ss_pred             hHHHHHHHHHHhCCeeecCCccCCCCCceEEEEECCCCceEEEe
Q 022818          236 SAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLV  279 (291)
Q Consensus       236 ~~~~l~~~~~~~G~~~~~~~~~~~~~~~~~~~~~DpdG~~iel~  279 (291)
                      +++++    +++|+++..+|...++ |.+.+|++|||||+|||+
T Consensus        73 ~~~~l----~~~g~~~~~~p~~~~~-g~~~~~~~DP~Gn~iei~  111 (111)
T d2pjsa1          73 VHARI----LKAGLPIEYGPVTEAW-GVQRLFLRDPFGKLINIL  111 (111)
T ss_dssp             HHHHH----HHTTCCCSEEEEECTT-SCEEEEEECTTSCEEEEE
T ss_pred             HHHHH----HhhccccccCCeEcCC-CcEEEEEECCCCCEEEeC
Confidence            99999    9999999999988887 468999999999999986

>d1sp8a1 d.32.1.3 (A:36-207) 4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Zea mays) [TaxId: 4577]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Corn (Zea mays) [TaxId: 4577]

Probab=99.71  E-value=7.4e-17  Score=122.98  Aligned_cols=131  Identities=17%  Similarity=0.168  Sum_probs=96.9

Q ss_pred             CCcceeeEEEEEEeCCHHHHHHHHHhhcCCEEEEEeecCCCceeEEEEecCCCCcceEEEeeecCCCC------------
Q 022818           18 KKDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVT------------   85 (291)
Q Consensus        18 ~~~~~~i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~------------   85 (291)
                      ...+++++||+|.|+|++++++||+++|||+++.+.....+.........+.....+.+.........            
T Consensus         8 ~~~i~~~~Hi~i~V~D~e~a~~FY~~~LGf~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   87 (172)
T d1sp8a1           8 RFHTLAFHHVELWCADAASAAGRFSFGLGAPLAARSDLSTGNSAHASLLLRSGSLSFLFTAPYAHGADAATAALPSFSAA   87 (172)
T ss_dssp             SSCEEEEEEEEEECSCHHHHHHHHHHHHTCCEEEEESGGGTCCSEEEEEEEETTEEEEEEEECCSSCCGGGCSSTTCCHH
T ss_pred             cCCcCEEEEEEEEeCCHHHHHHHHHHhhCceEEEEecccccceeEEEEEeccCCeeeEEeeccCCCchhhhcccccCCcc
Confidence            35699999999999999999999999999999987665544322222222233334433322221100            


Q ss_pred             ---c--ccCCCCceEEEEEeCCHHHHHHHHHHcCCeeecCCeecCCCceEEEEEECCCCCEEEEEeCCC
Q 022818           86 ---S--YDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRGP  149 (291)
Q Consensus        86 ---~--~~~g~~~~~i~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~Dp~G~~iel~~~~~  149 (291)
                         .  ...+.|+.||||+|+|+++++++|+++|+++..+|....+|. ++++++.|.+..++|++..+
T Consensus        88 ~~~~~~~~~g~Gi~Hiaf~VdDi~aa~~~l~~~Ga~~~~~P~~~~~g~-~~a~v~~~g~~~~~lve~~~  155 (172)
T d1sp8a1          88 AARRFAADHGLAVRAVALRVADAEDAFRASVAAGARPAFGPVDLGRGF-RLAEVELYGDVVLRYVSYPD  155 (172)
T ss_dssp             HHHHHHHHHSSEEEEEEEEESCHHHHHHHHHTTTCCEEEEEEEEETTE-EEEEEEEETTEEEEEEECCT
T ss_pred             hhhhhhhhcCCceEEEEEeeCcHHHHHHHHHHCcCEeccCCccCCCCE-EEEEEECCCCcEEEEEecCC
Confidence               0  014678999999999999999999999999999998877764 45888889888899999875

>d2c21a1 d.32.1.1 (A:3-141) Glyoxalase I (lactoylglutathione lyase) {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Glyoxalase I (lactoylglutathione lyase)
domain: Glyoxalase I (lactoylglutathione lyase)
species: Leishmania major [TaxId: 5664]

Probab=99.71  E-value=2.9e-16  Score=114.84  Aligned_cols=122  Identities=57%  Similarity=0.937  Sum_probs=87.4

Q ss_pred             eeeEEEEEEeCCHHHHHHHHHhhcCCEEEEEeecCCCceeEEEEecCCCCcceEEEeeecCCCCcccCCCCceEEEEEeC
Q 022818           22 RRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIATE  101 (291)
Q Consensus        22 ~~i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~~~~i~~~v~  101 (291)
                      ++|.|++|.|+|+++|++||+++|||++..+..........................................++++.++
T Consensus         2 ~r~~Hv~l~V~Dl~~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (139)
T d2c21a1           2 RRMLHTMIRVGDLDRSIKFYTERLGMKVLRKWDVPEDKYTLVFLGYGPEMSSTVLELTYNYGVTSYKHDEAYGHIAIGVE   81 (139)
T ss_dssp             CEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEEGGGTEEEEEEESSCTTTSCEEEEEEETTCCCCCCCSSEEEEEEEES
T ss_pred             CceEEEEEEeCCHHHHHHHHHHHhCCEeeccccccccceeeeeecccccccccccccccccCcccccCCCccceeeeehh
Confidence            58999999999999999999999999998876655554444444333222222222222222233334456778899999


Q ss_pred             CHHHHHHHHHHcCCeeecCCeecCCCceEEEEEECCCCCEEEEEeCC
Q 022818          102 DVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRG  148 (291)
Q Consensus       102 d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~Dp~G~~iel~~~~  148 (291)
                      ++.++.+++...++++...+    +|.. ++||+|||||+|||++..
T Consensus        82 ~~~~~~~~~~~~~~~~~~~~----~g~~-~~~~~DPdGn~iEl~~~~  123 (139)
T d2c21a1          82 DVKELVADMRKHDVPIDYED----ESGF-MAFVVDPDGYYIELLNEK  123 (139)
T ss_dssp             CHHHHHHHHHHTTCCEEEEC----SSSS-EEEEECTTSCEEEEEEHH
T ss_pred             hHHHHHHHHHHcCCceeeCC----CCcE-EEEEECCCCCEEEEEECC
Confidence            99999999999998765432    3444 489999999999999854

>d1lgta1 d.32.1.3 (A:2-132) 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme) {Burkholderia cepacia, formerly Pseudomonas cepacia [TaxId: 292]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme)
species: Burkholderia cepacia, formerly Pseudomonas cepacia [TaxId: 292]

Probab=99.71  E-value=4.9e-17  Score=118.31  Aligned_cols=110  Identities=17%  Similarity=0.181  Sum_probs=79.5

Q ss_pred             CceEEEeeeCChhhhHHHHHHhcCCeeeeeeccCCccceEEEeccccCCceeEEEEeeecCcceeecCcceeEEEEEecc
Q 022818          153 PLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDD  232 (291)
Q Consensus       153 ~~~~v~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~hi~~~v~d  232 (291)
                      .+.||+|.|+|++++++||+++|||++..+.+      ..++++.+..  +..+.+..       ...+++.|++|.|.+
T Consensus         4 ~l~hv~i~V~Dl~~s~~FY~~vLG~~~~~~~~------~~~~l~~~~~--~~~l~l~~-------~~~~~~~h~~f~v~~   68 (131)
T d1lgta1           4 SLGYMGFAVSDVAAWRSFLTQKLGLMEAGTTD------NGDLFRIDSR--AWRIAVQQ-------GEVDDLAFAGYEVAD   68 (131)
T ss_dssp             EEEEEEEEESCHHHHHHHHHHTTCCEEEEEET------TEEEEESSSB--SCSEEEEE-------CTTCEEEEEEEEESS
T ss_pred             cccEEEEEeCCHHHHHHHHHHhhCCceeecCC------cceEEeecCC--ceEEEEec-------CCCCCceEEEEEEcc
Confidence            58999999999999999999999999876532      2334554333  33344432       123578999999976


Q ss_pred             ---hHHhHHHHHHHHHHhCCeeecCCccCC--CCCceEEEEECCCCceEEEeec
Q 022818          233 ---VYKSAEVVNLVTQELGGKITRQPGSIP--GLNTKITSFVDPDGWKTVLVDN  281 (291)
Q Consensus       233 ---i~~~~~~l~~~~~~~G~~~~~~~~~~~--~~~~~~~~~~DpdG~~iel~~~  281 (291)
                         ++++.++|    +++|+++...|....  .+..+.+||+|||||+|||+..
T Consensus        69 ~~dl~~~~~~l----~~~g~~~~~~~~~~~~~~~~~~~~~f~DPdGn~iE~~~~  118 (131)
T d1lgta1          69 AAGLAQMADKL----KQAGIAVTTGDASLARRRGVTGLITFADPFGLPLEIYYG  118 (131)
T ss_dssp             HHHHHHHHHHH----HHTTCCCEECCHHHHHHHTCSEEEEEECTTSCEEEEEEC
T ss_pred             HHHHHHHHHHH----HHcCCceEECCccccccCCceEEEEEECCCCCEEEEEeC
Confidence               44455555    999999987775431  1234789999999999999754

>d1t47a1 d.32.1.3 (A:16-178) 4-hydroxyphenylpyruvate dioxygenase, HppD {Streptomyces avermitilis [TaxId: 33903]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Streptomyces avermitilis [TaxId: 33903]

Probab=99.71  E-value=2.7e-17  Score=124.41  Aligned_cols=128  Identities=16%  Similarity=0.225  Sum_probs=96.0

Q ss_pred             CCceEEEeeeCChhhhHHHHHHhcCCeeeeeeccCCc--cceEEEeccccCCceeEEEEeeecCcce----------eec
Q 022818          152 EPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEY--KYTLAMLGYAEEDQTTVLELTYNYGVTE----------YTK  219 (291)
Q Consensus       152 ~~~~~v~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~l~~~~~~~~----------~~~  219 (291)
                      .+++||.+.|+|+++|++||+++|||+++.....+..  ....+.++.+    ...+++........          ...
T Consensus         6 ~~idHv~i~V~D~~~a~~fY~~~lGf~~v~~~~~~~~~~~~~~~~l~~~----~~~i~l~~~~~~~~~~~~~~~~~~~~~   81 (163)
T d1t47a1           6 KGMDAVVFAVGNAKQAAHYYSTAFGMQLVAYSGPENGSRETASYVLTNG----SARFVLTSVIKPATPWGHFLADHVAEH   81 (163)
T ss_dssp             CEEEEEEEECSCHHHHHHHHHHTSCCEEEEEESGGGTCCSEEEEEEEET----TEEEEEEEESSCCSHHHHHHHHHHHHH
T ss_pred             ceEeEEEEEeCCHHHHHHHHHHHhCCeEEeeecccccceeEEEEEEecC----CEEEEEeccCCCCCccccccchhhhcC
Confidence            5699999999999999999999999998876544332  2233444422    35566655433211          124


Q ss_pred             CcceeEEEEEecchHHhHHHHHHHHHHhCCeeecCCccCCCCC--ceEEEEECCCCceEEEeechhhhhh
Q 022818          220 GNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLN--TKITSFVDPDGWKTVLVDNEDFLKE  287 (291)
Q Consensus       220 ~~~~~hi~~~v~di~~~~~~l~~~~~~~G~~~~~~~~~~~~~~--~~~~~~~DpdG~~iel~~~~~~~~~  287 (291)
                      +.|+.||||.|+|+++++++|    +++|++++.+|......+  .+++++++|+|..++|+|+..+++.
T Consensus        82 g~G~~hiaf~VdDid~a~~~l----~~~Ga~~~~~P~~~~d~~G~v~~a~I~~~g~~~~~lier~~~~g~  147 (163)
T d1t47a1          82 GDGVVDLAIEVPDARAAHAYA----IEHGARSVAEPYELKDEHGTVVLAAIATYGKTRHTLVDRTGYDGP  147 (163)
T ss_dssp             CSEEEEEEEECSCHHHHHHHH----HHTTCCEEEEEEEEEETTEEEEEEEEECSTTCEEEEEEEEEECSS
T ss_pred             CCceEEEEEeeCCHHHHHHHH----HHCCCeEEecCcceeCCCCEEEEEEEecCCCceEEEEeccCCCCc
Confidence            679999999999999999999    999999999887643322  3678999999999999998776543

>d1klla_ d.32.1.2 (A:) Mitomycin resistance protein D, MRD {Streptomyces lavendulae [TaxId: 1914]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Mitomycin resistance protein D, MRD
species: Streptomyces lavendulae [TaxId: 1914]

Probab=99.70  E-value=6.5e-17  Score=117.22  Aligned_cols=120  Identities=19%  Similarity=0.171  Sum_probs=83.9

Q ss_pred             eeeEEEEEEeCCHHHHHHHHHhhcCCEEEEEeecCCCceeEEEEecCCCCcceEEEeeec----CCCCcccCCCCceEEE
Q 022818           22 RRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYN----YGVTSYDIGTGFGHFA   97 (291)
Q Consensus        22 ~~i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~----~~~~~~~~g~~~~~i~   97 (291)
                      .+|+|++|.|+|++++++||++ ||+.+........    .+.+..++ ...+.+.....    ........+.+..|++
T Consensus         1 ~ri~hv~l~V~D~~~s~~FY~~-Lg~~~~~~~~~~~----~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~   74 (128)
T d1klla_           1 ARISLFAVVVEDMAKSMEFYRK-MGVEIPAEADSAP----HTEAVLDG-GIRLAWDTVETVRSYDPEWQAPTGGHRFAIA   74 (128)
T ss_dssp             CCCCEEEEEESCHHHHHHHHHH-TTCCCCTTGGGCS----EEEEECGG-GCEEEEEEHHHHHHHCTTCCCCCSSCSCEEE
T ss_pred             CeEeEEEEEcCCHHHHHHHHHH-hCCcccccccccc----ceeeeccc-eeeeeecccccccccCCCCCCCccccceeEe
Confidence            3789999999999999999987 8998765433222    23333222 22232322111    1111112233567999


Q ss_pred             EEeCC---HHHHHHHHHHcCCeeecCCeecCCCceEEEEEECCCCCEEEEEeCC
Q 022818           98 IATED---VYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRG  148 (291)
Q Consensus        98 ~~v~d---~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~Dp~G~~iel~~~~  148 (291)
                      |.|.+   +++++++|+++|+++..+|...++|.+. +||+|||||+|||.+..
T Consensus        75 ~~v~~~~~l~~~~~~l~~~G~~~~~~p~~~~~G~~~-~~~~DPdG~~iel~~p~  127 (128)
T d1klla_          75 FEFPDTASVDKKYAELVDAGYEGHLKPWNAVWGQRY-AIVKDPDGNVVDLFAPL  127 (128)
T ss_dssp             EECSSHHHHHHHHHHHHHTTCEEEEEEEECTTSEEE-EEEECTTSCEEEEEEEC
T ss_pred             eeeccchhhHHHHHHHHhccCccccCCeEcCCCcEE-EEEECCCCCEEEEEecC
Confidence            99976   7778999999999999999888887764 89999999999998754

>d1kw3b1 d.32.1.3 (B:1-132) 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme) {Pseudomonas sp. [TaxId: 306]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme)
species: Pseudomonas sp. [TaxId: 306]

Probab=99.70  E-value=7.9e-17  Score=117.36  Aligned_cols=114  Identities=16%  Similarity=0.127  Sum_probs=80.3

Q ss_pred             CCceEEEeeeCChhhhHHHHHHhcCCeeeeeeccCCccceEEEeccccCCceeEEEEeeecCcceeecCcceeEEEEEec
Q 022818          152 EPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTD  231 (291)
Q Consensus       152 ~~~~~v~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~hi~~~v~  231 (291)
                      .+|.||+|.|+|++++.+||+++|||++..+..      ..+++..+..  +..+.+..       ...++..|++|.|.
T Consensus         3 ~~L~hv~i~v~Dl~~s~~FY~~vLG~~~~~~~~------~~~~l~~~~~--~~~l~~~~-------~~~~~~~h~~f~v~   67 (132)
T d1kw3b1           3 ERLGYLGFAVKDVPAWDHFLTKSVGLMAAGSAG------DAALYRADQR--AWRIAVQP-------GELDDLAYAGLEVD   67 (132)
T ss_dssp             CEEEEEEEEESCHHHHHHHHHHTTCCEEEEEET------TEEEEESSSB--SCSEEEEE-------CTTCEEEEEEEECS
T ss_pred             ccccEEEEEeCCHHHHHHHHHHHhCCceecccc------ceeeeeeeec--ceeeeeec-------cCCCCceEEEEEec
Confidence            478999999999999999999999999876543      2334554333  33333322       12357899999997


Q ss_pred             chHHhHHHHHHHHHHhCCeeecCCccCCC--CCceEEEEECCCCceEEEeec
Q 022818          232 DVYKSAEVVNLVTQELGGKITRQPGSIPG--LNTKITSFVDPDGWKTVLVDN  281 (291)
Q Consensus       232 di~~~~~~l~~~~~~~G~~~~~~~~~~~~--~~~~~~~~~DpdG~~iel~~~  281 (291)
                      +.+ .++++.++++++|+++...+.....  +..+.+||+||+||+|||+..
T Consensus        68 ~~~-dl~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~DPdGn~iE~~~~  118 (132)
T d1kw3b1          68 DAA-ALERMADKLRQAGVAFTRGDEALMQQRKVMGLLCLQDPFGLPLEIYYG  118 (132)
T ss_dssp             SHH-HHHHHHHHHHHHTCCCEECCHHHHHHHTCSEEEEEECTTSCEEEEEEC
T ss_pred             cHH-HHHHHHHHHHHcCCCceecCccccccCCcceEEEEECCCCCEEEEEEC
Confidence            632 2333334459999999887764321  124689999999999999854

>d1klla_ d.32.1.2 (A:) Mitomycin resistance protein D, MRD {Streptomyces lavendulae [TaxId: 1914]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Mitomycin resistance protein D, MRD
species: Streptomyces lavendulae [TaxId: 1914]

Probab=99.69  E-value=3.2e-17  Score=118.88  Aligned_cols=116  Identities=21%  Similarity=0.204  Sum_probs=80.9

Q ss_pred             CceEEEeeeCChhhhHHHHHHhcCCeeeeeeccCCccceEEEeccccCCceeEEEEeeec------CcceeecCcceeEE
Q 022818          153 PLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNY------GVTEYTKGNAYAQV  226 (291)
Q Consensus       153 ~~~~v~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~------~~~~~~~~~~~~hi  226 (291)
                      +|.|++|.|+|++++++||++ |||.+........  +......  .   ...+.+....      .....+.+.+..|+
T Consensus         2 ri~hv~l~V~D~~~s~~FY~~-Lg~~~~~~~~~~~--~~~~~~~--~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   73 (128)
T d1klla_           2 RISLFAVVVEDMAKSMEFYRK-MGVEIPAEADSAP--HTEAVLD--G---GIRLAWDTVETVRSYDPEWQAPTGGHRFAI   73 (128)
T ss_dssp             CCCEEEEEESCHHHHHHHHHH-TTCCCCTTGGGCS--EEEEECG--G---GCEEEEEEHHHHHHHCTTCCCCCSSCSCEE
T ss_pred             eEeEEEEEcCCHHHHHHHHHH-hCCcccccccccc--ceeeecc--c---eeeeeecccccccccCCCCCCCccccceeE
Confidence            789999999999999999976 8998765544332  2222222  1   2233332211      11111223355799


Q ss_pred             EEEecc---hHHhHHHHHHHHHHhCCeeecCCccCCCCCceEEEEECCCCceEEEeec
Q 022818          227 AISTDD---VYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDN  281 (291)
Q Consensus       227 ~~~v~d---i~~~~~~l~~~~~~~G~~~~~~~~~~~~~~~~~~~~~DpdG~~iel~~~  281 (291)
                      +|.|++   +++++++|    +++|+++..+|...++ |.+.+||+|||||+|||.++
T Consensus        74 ~~~v~~~~~l~~~~~~l----~~~G~~~~~~p~~~~~-G~~~~~~~DPdG~~iel~~p  126 (128)
T d1klla_          74 AFEFPDTASVDKKYAEL----VDAGYEGHLKPWNAVW-GQRYAIVKDPDGNVVDLFAP  126 (128)
T ss_dssp             EEECSSHHHHHHHHHHH----HHTTCEEEEEEEECTT-SEEEEEEECTTSCEEEEEEE
T ss_pred             eeeeccchhhHHHHHHH----HhccCccccCCeEcCC-CcEEEEEECCCCCEEEEEec
Confidence            999987   55566677    9999999999988887 46899999999999999875

>d1f1ua2 d.32.1.3 (A:148-323) Homoprotocatechuate 2,3-dioxygenase {Arthrobacter globiformis [TaxId: 1665]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Homoprotocatechuate 2,3-dioxygenase
species: Arthrobacter globiformis [TaxId: 1665]

Probab=99.69  E-value=5.5e-16  Score=118.41  Aligned_cols=120  Identities=19%  Similarity=0.228  Sum_probs=87.5

Q ss_pred             cceeeEEEEEEeCCHHHHHHHHHhhcCCEEEEEeecCCCceeEEEEecCCCCcceEEEeeecCCCCcccCCCCceEEEEE
Q 022818           20 DKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIA   99 (291)
Q Consensus        20 ~~~~i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~~~~i~~~   99 (291)
                      .+++|+||+|.|+|++++++|| ++|||++..+...+.+....+++..+....  .+.+...       ..++.+|++|.
T Consensus         2 ~i~rl~Hv~l~v~Dle~s~~FY-e~LGf~~~d~~~~~~~~~~~~~~~~~~~~~--~l~~~~~-------~~~~~~H~~f~   71 (176)
T d1f1ua2           2 ELVRLDHFNQVTPDVPRGRAYL-EDLGFRVSEDIKDSDGVTYAAWMHRKQTVH--DTALTGG-------NGPRMHHVAFA   71 (176)
T ss_dssp             CCCEEEEEEEEESCHHHHHHHH-HHTTCEEEEEEECTTCCEEEEEEESSSSSC--SEEEEES-------SBSEEEEEEEE
T ss_pred             ceeEeeeEEEEcCCHHHHHHHH-HHCCCEEEEEEecCCcceeeeeeccCcccc--ceecccc-------cCCCccceeEE
Confidence            4789999999999999999999 579999987766666555556665433222  2322222       23478999999


Q ss_pred             eCC---HHHHHHHHHHcCCee--ecCCeecCCCceEEEEEECCCCCEEEEEeCCC
Q 022818          100 TED---VYKLVENIRAKGGNV--TREPGPLKGGTTHIAFVKDPDGYIFELIQRGP  149 (291)
Q Consensus       100 v~d---~~~~~~~l~~~G~~~--~~~~~~~~~g~~~~~~~~Dp~G~~iel~~~~~  149 (291)
                      +.+   +.++.++|.++|+..  ...|.....|...++||+|||||+||+.....
T Consensus        72 ~~~~~~v~~~~~~l~~~g~~~~~~~~p~~h~~g~~~~~Y~~DPdG~~iEl~~~~~  126 (176)
T d1f1ua2          72 THEKHNIIQICDKMGALRISDRIERGPGRHGVSNAFYLYILDPDGHRIEIYTQDY  126 (176)
T ss_dssp             CSSHHHHHHHHHHHHHTTCGGGEEEEEEECSTTCCEEEEEECTTCCEEEEEECCC
T ss_pred             eccchhHHHHHHHHHHcCCceeeeecccccCCCCceEEEEECCCCCEEEEEeCCc
Confidence            975   556678899999853  34455555555556999999999999988654

>d1mpya1 d.32.1.3 (A:1-145) Catechol 2,3-dioxygenase (metapyrocatechase) {Pseudomonas putida, mt2 [TaxId: 303]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Catechol 2,3-dioxygenase (metapyrocatechase)
species: Pseudomonas putida, mt2 [TaxId: 303]

Probab=99.69  E-value=1.7e-16  Score=117.49  Aligned_cols=117  Identities=15%  Similarity=0.191  Sum_probs=78.7

Q ss_pred             CCceEEEeeeCChhhhHHHHHHhcCCeeeeeeccCCccceEEEeccccCCceeEEEEeeecCcceeecCcceeEEEEEec
Q 022818          152 EPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTD  231 (291)
Q Consensus       152 ~~~~~v~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~hi~~~v~  231 (291)
                      .+|.||.|.|+|++++.+||+++|||++..+....   .... ... .......+.+.. .      ..++..|++|.+.
T Consensus         6 ~rl~Hv~l~v~D~~~s~~FY~~vLG~~~~~~~~~~---~~~~-~~~-~~~~~~~~~~~~-~------~~~~~~~~~~~~~   73 (145)
T d1mpya1           6 MRPGHVQLRVLDMSKALEHYVELLGLIEMDRDDQG---RVYL-KAW-TEVDKFSLVLRE-A------DEPGMDFMGFKVV   73 (145)
T ss_dssp             EEEEEEEEEESCHHHHHHHHHHTTCCEEEEECTTS---CEEE-ECT-TCCBSCSEEEEE-C------SSCEEEEEEEEES
T ss_pred             cEeeeEEEEeCCHHHHHHHHHHhhCCEEEEeeccC---ccce-ecc-cccceeeccccc-c------Ccccceeeeeeeh
Confidence            57899999999999999999999999987653321   1111 121 111122222222 1      1234456666655


Q ss_pred             ---chHHhHHHHHHHHHHhCCeeecCCccCCCCCceEEEEECCCCceEEEeechhh
Q 022818          232 ---DVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNEDF  284 (291)
Q Consensus       232 ---di~~~~~~l~~~~~~~G~~~~~~~~~~~~~~~~~~~~~DpdG~~iel~~~~~~  284 (291)
                         |++++.++|    +++|+++...|.....+.++.+||+|||||.|||.+....
T Consensus        74 ~~~dl~~~~~~L----~~~g~~~~~~~~~~~~g~~~~~~f~DPdG~~iEl~~~~e~  125 (145)
T d1mpya1          74 DEDALRQLERDL----MAYGCAVEQLPAGELNSCGRRVRFQAPSGHHFELYADKEY  125 (145)
T ss_dssp             CHHHHHHHHHHH----HHHTCCCEEECTTSSTTBCCEEEEECTTSCEEEEESCBCB
T ss_pred             hHHHHHHHHHHH----HHCCCcEEECCCcccCCceEEEEEECCCCCEEEEEEeccc
Confidence               566666666    9999998877766544345899999999999999976543

>d1npba_ d.32.1.2 (A:) Fosfomycin resistance protein A (FosA) {Serratia marcescens [TaxId: 615]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Fosfomycin resistance protein A (FosA)
species: Serratia marcescens [TaxId: 615]

Probab=99.68  E-value=3.1e-16  Score=115.41  Aligned_cols=114  Identities=24%  Similarity=0.292  Sum_probs=79.5

Q ss_pred             CCceEEEeeeCChhhhHHHHHHhcCCeeeeeeccCCccceEEEeccccCCceeEEEEeeecCcceeecCcceeEEEEEe-
Q 022818          152 EPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAIST-  230 (291)
Q Consensus       152 ~~~~~v~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~hi~~~v-  230 (291)
                      ..|.||+|.|+|++++.+||+++|||++.....      ....+..+..  ...+.+...... ......+..|++|.+ 
T Consensus         3 ~~l~Hi~l~v~d~~~~~~FY~~vLG~~~~~~~~------~~~~~~~~~~--~~~l~~~~~~~~-~~~~~~~~~h~~~~~~   73 (140)
T d1npba_           3 QSLNHLTLAVSDLQKSVTFWHELLGLTLHARWN------TGAYLTCGDL--WVCLSYDEARQY-VPPQESDYTHYAFTVA   73 (140)
T ss_dssp             CEEEEEEEEESCHHHHHHHHHTTSCCEEEEEET------TEEEEEETTE--EEEEEECTTCCC-CCGGGSCSCEEEEECC
T ss_pred             CcEeEEEEEeCCHHHHHHHHHHHhCCEEEEEec------cccccccccc--cceeeccccccc-CCCcCCccceeeeech
Confidence            358999999999999999999999999876542      1222332221  233333221111 122334677888888 


Q ss_pred             -cchHHhHHHHHHHHHHhCCeeecCCccCCCCCceEEEEECCCCceEEEeech
Q 022818          231 -DDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNE  282 (291)
Q Consensus       231 -~di~~~~~~l~~~~~~~G~~~~~~~~~~~~~~~~~~~~~DpdG~~iel~~~~  282 (291)
                       +|++++.++|    +++|+++...+.    .+++.+||+|||||+|||.+..
T Consensus        74 ~~d~~~~~~~l----~~~Gv~~~~~~~----~~~~~~~~~DPdGn~iEi~~~~  118 (140)
T d1npba_          74 EEDFEPLSQRL----EQAGVTIWKQNK----SEGASFYFLDPDGHKLELHVGS  118 (140)
T ss_dssp             HHHHHHHHHHH----HHTTCCEEECCC----SSSEEEEEECTTCCEEEEEECC
T ss_pred             HHHHHHHHHHH----HHCCCeEeecCC----CCceEEEEECCCCCEEEEEECC
Confidence             5677777888    999999876554    2468899999999999997754

>d1sp8a1 d.32.1.3 (A:36-207) 4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Zea mays) [TaxId: 4577]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Corn (Zea mays) [TaxId: 4577]

Probab=99.67  E-value=1.5e-16  Score=121.32  Aligned_cols=129  Identities=16%  Similarity=0.062  Sum_probs=94.4

Q ss_pred             CCceEEEeeeCChhhhHHHHHHhcCCeeeeeeccCCccceEEEeccccCCceeEEEEeeecCc--c--------------
Q 022818          152 EPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGV--T--------------  215 (291)
Q Consensus       152 ~~~~~v~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~--~--------------  215 (291)
                      .+++||.|.|+|++++++||+++|||+++.......+...........+  ...+.+......  .              
T Consensus        12 ~~~~Hi~i~V~D~e~a~~FY~~~LGf~~v~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   89 (172)
T d1sp8a1          12 LAFHHVELWCADAASAAGRFSFGLGAPLAARSDLSTGNSAHASLLLRSG--SLSFLFTAPYAHGADAATAALPSFSAAAA   89 (172)
T ss_dssp             EEEEEEEEECSCHHHHHHHHHHHHTCCEEEEESGGGTCCSEEEEEEEET--TEEEEEEEECCSSCCGGGCSSTTCCHHHH
T ss_pred             CEEEEEEEEeCCHHHHHHHHHHhhCceEEEEecccccceeEEEEEeccC--CeeeEEeeccCCCchhhhcccccCCcchh
Confidence            3689999999999999999999999999876554433222222221122  222222211110  0              


Q ss_pred             ---eeecCcceeEEEEEecchHHhHHHHHHHHHHhCCeeecCCccCCCCCceEEEEECCCCceEEEeechhhhhh
Q 022818          216 ---EYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNEDFLKE  287 (291)
Q Consensus       216 ---~~~~~~~~~hi~~~v~di~~~~~~l~~~~~~~G~~~~~~~~~~~~~~~~~~~~~DpdG~~iel~~~~~~~~~  287 (291)
                         ....+.|+.||||.|+|+++++++|    +++|+++..+|....+ +.++++++.+.+..++|+++.++.+.
T Consensus        90 ~~~~~~~g~Gi~Hiaf~VdDi~aa~~~l----~~~Ga~~~~~P~~~~~-g~~~a~v~~~g~~~~~lve~~~~~~~  159 (172)
T d1sp8a1          90 RRFAADHGLAVRAVALRVADAEDAFRAS----VAAGARPAFGPVDLGR-GFRLAEVELYGDVVLRYVSYPDGAAG  159 (172)
T ss_dssp             HHHHHHHSSEEEEEEEEESCHHHHHHHH----HTTTCCEEEEEEEEET-TEEEEEEEEETTEEEEEEECCTTGGG
T ss_pred             hhhhhhcCCceEEEEEeeCcHHHHHHHH----HHCcCEeccCCccCCC-CEEEEEEECCCCcEEEEEecCCCCCC
Confidence               0124679999999999999999999    9999999999987655 46889999999999999999987764

>d1sqda1 d.32.1.3 (A:14-180) 4-hydroxyphenylpyruvate dioxygenase, HppD {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.66  E-value=3.3e-16  Score=118.80  Aligned_cols=128  Identities=14%  Similarity=0.096  Sum_probs=91.6

Q ss_pred             CCceEEEeeeCChhhhHHHHHHhcCCeeeeeeccCCccceEEEeccccCCceeEEEEeeecCcc----------------
Q 022818          152 EPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVT----------------  215 (291)
Q Consensus       152 ~~~~~v~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~----------------  215 (291)
                      .+++||.+.|+|++++++||+++|||++..+...+.+............  ...+.+.......                
T Consensus        11 ~~~dHv~i~V~Dle~a~~fY~~~LGf~~~~~~~~~~~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~~~~~~~~~~~~~~   88 (167)
T d1sqda1          11 KRFHHIEFWCGDATNVARRFSWGLGMRFSAKSDLSTGNMVHASYLLTSG--DLRFLFTAPYSPSLSAGEIKPTTTASIPS   88 (167)
T ss_dssp             EEEEEEEEECSCHHHHHHHHHHHHTCEEEEEESGGGTCSSEEEEEEEET--TEEEEEEEECCGGGTTTCCGGGCCCSSTT
T ss_pred             ceEeEEEEEeCCHHHHHHHHHHHhCCeEEEEeeccCCCeeEEEEEeeCC--CeeEEEecccccccccccccccccccccc
Confidence            3689999999999999999999999998876554433222222221122  1222221111000                


Q ss_pred             -e--------eecCcceeEEEEEecchHHhHHHHHHHHHHhCCeeecCCccCCCCCceEEEEECCCCceEEEeechhhhh
Q 022818          216 -E--------YTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNEDFLK  286 (291)
Q Consensus       216 -~--------~~~~~~~~hi~~~v~di~~~~~~l~~~~~~~G~~~~~~~~~~~~~~~~~~~~~DpdG~~iel~~~~~~~~  286 (291)
                       +        ...++|+.||||.|+|+++++++|    +++|++++.+|....+ +.++++++.+++..++|++++....
T Consensus        89 ~~~~~~~~~~~~~~~G~~Hiaf~VdDi~aa~~~l----~~~G~~~~~~P~~~~~-~~~~a~I~~~gd~~~~~v~r~~~~~  163 (167)
T d1sqda1          89 FDHGSCRSFFSSHGLGVRAVAIEVEDAESAFSIS----VANGAIPSSPPIVLNE-AVTIAEVKLYGDVVLRYVSYKAEDT  163 (167)
T ss_dssp             CCHHHHHHHHHHHCSEEEEEEEEESCHHHHHHHH----HHTTCCEEEEEEEETT-TEEEEEEEEETTEEEEEEEECCC--
T ss_pred             CCcchHHHhhhccCCCceEEEEEeCCHHHHHHHH----HHCCCEEecCCeecCC-CEEEEEEEccCCcEEEEEecCCCcc
Confidence             0        113568999999999999999999    9999999999988765 4688999999999999999977543

>d1nkia_ d.32.1.2 (A:) Fosfomycin resistance protein A (FosA) {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Fosfomycin resistance protein A (FosA)
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.65  E-value=1.1e-15  Score=111.58  Aligned_cols=109  Identities=26%  Similarity=0.284  Sum_probs=75.3

Q ss_pred             CceEEEeeeCChhhhHHHHHHhcCCeeeeeeccCCccceEEEeccccCCceeEEEEeeecCcceeecCcceeEEEEEe--
Q 022818          153 PLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAIST--  230 (291)
Q Consensus       153 ~~~~v~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~hi~~~v--  230 (291)
                      .|+||+|.|+|++++.+||+++||+++..+.+.    ...+..+      ...+.........  ....+..|++|.+  
T Consensus         4 ~i~Hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~----~~~~~~~------~~~~~~~~~~~~~--~~~~~~~h~~~~~~~   71 (134)
T d1nkia_           4 GLNHLTLAVADLPASIAFYRDLLGFRLEARWDQ----GAYLELG------SLWLCLSREPQYG--GPAADYTHYAFGIAA   71 (134)
T ss_dssp             EEEEEEEEESCHHHHHHHHHHTTCCEEEEEETT----EEEEEET------TEEEEEEECTTCC--CCCSSSCEEEEEECH
T ss_pred             cEeEEEEEeCCHHHHHHHHHHhhCCeEEEeccc----eeeeecC------CeEEEEeeecccc--ccccccccchhcccc
Confidence            589999999999999999999999998765431    2222222      2333332222211  1233445666665  


Q ss_pred             cchHHhHHHHHHHHHHhCCeeecCCccCCCCCceEEEEECCCCceEEEeec
Q 022818          231 DDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDN  281 (291)
Q Consensus       231 ~di~~~~~~l~~~~~~~G~~~~~~~~~~~~~~~~~~~~~DpdG~~iel~~~  281 (291)
                      +|+++++++|    +++|+++...+.    +.++.+||+|||||+|||...
T Consensus        72 ~dl~~~~~~l----~~~G~~~~~~~~----~~~~~~~f~DPdGn~iEl~~~  114 (134)
T d1nkia_          72 ADFARFAAQL----RAHGVREWKQNR----SEGDSFYFLDPDGHRLEAHVG  114 (134)
T ss_dssp             HHHHHHHHHH----HHTTCCEEECCC----SSSCEEEEECTTCCEEEEESC
T ss_pred             chHHHHHHHH----HHCCCcCccCCC----cceeEEEEECCCCCEEEEEEC
Confidence            5788888888    999999865532    235789999999999999774

>d1kw3b2 d.32.1.3 (B:133-288) 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme) {Pseudomonas sp. [TaxId: 306]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme)
species: Pseudomonas sp. [TaxId: 306]

Probab=99.64  E-value=1.5e-15  Score=113.57  Aligned_cols=120  Identities=13%  Similarity=0.092  Sum_probs=81.4

Q ss_pred             CCceEEEeeeCChhhhHHHHHHhcCCeeeeeeccC---CccceEEEeccccCCceeEEEEeeecCcceeecCcceeEEEE
Q 022818          152 EPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKP---EYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAI  228 (291)
Q Consensus       152 ~~~~~v~l~v~d~~~~~~fy~~~lG~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~hi~~  228 (291)
                      ..|.||.|.|+|++++.+||+++|||++.......   .......++.....  +..+....      .+..+++.|++|
T Consensus         9 ~GlgHv~l~v~D~e~t~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~~~~~~~--~h~~a~~~------~~~~~gl~Hiaf   80 (156)
T d1kw3b2           9 QGIGHFVRCVPDTAKAMAFYTEVLGFVLSDIIDIQMGPETSVPAHFLHCNGR--HHTIALAA------FPIPKRIHHFML   80 (156)
T ss_dssp             GCSCEEEEECSCHHHHHHHHHHTTCCEEEEEEEEEEETTEEEEEEEEESSSB--SCSEEEEC------CSCSSSEEEEEE
T ss_pred             CCcceEEEecCCHHHHHHHHHHhcCceeeeEEeeccCCCCcceeEEEeeccc--cceeeecc------CCCCCceeEEEE
Confidence            57999999999999999999999999987654321   22223344443332  22232221      123458999999


Q ss_pred             EecchHHhHHHHHHHHHHhCCeeecCCccCCCCCceEEEEECCCCc-eEEEeec
Q 022818          229 STDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGW-KTVLVDN  281 (291)
Q Consensus       229 ~v~di~~~~~~l~~~~~~~G~~~~~~~~~~~~~~~~~~~~~DpdG~-~iel~~~  281 (291)
                      .|+++++..+. .++|+++|+.+ ..|.++..+...++|++||+|+ .+|+...
T Consensus        81 ~v~~~ddv~~~-~d~l~~~G~~~-~g~~rH~~~~~~s~Y~~DP~G~~~~E~~~~  132 (156)
T d1kw3b2          81 QANTIDDVGYA-FDRLDAAGRIT-SLLGRHTNDQTLSFYADTPSPMIEVEFGWG  132 (156)
T ss_dssp             EBSSHHHHHHH-HHHHHHTTCBC-BCSEEESSSCCEEEEEECSSTTCEEEEEEC
T ss_pred             ECCCHHHHHHH-HHHHHhcCCce-ecCcccCCCCeEEEEEECCCCCeEEEEecC
Confidence            99875554332 34559999875 4666665444588999999998 5899654

>d1kw3b2 d.32.1.3 (B:133-288) 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme) {Pseudomonas sp. [TaxId: 306]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme)
species: Pseudomonas sp. [TaxId: 306]

Probab=99.62  E-value=5.2e-15  Score=110.58  Aligned_cols=119  Identities=21%  Similarity=0.231  Sum_probs=81.3

Q ss_pred             ceeeEEEEEEeCCHHHHHHHHHhhcCCEEEEEeecC---CCceeEEEEecCCCCcceEEEeeecCCCCcccCCCCceEEE
Q 022818           21 KRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVP---EEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFA   97 (291)
Q Consensus        21 ~~~i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~~~~i~   97 (291)
                      ..+|+|++|.|+|++++.+||+++|||++......+   .......++..+...  ..+.+...+      ...+++|++
T Consensus         8 ~~GlgHv~l~v~D~e~t~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~~~~~~~~--h~~a~~~~~------~~~gl~Hia   79 (156)
T d1kw3b2           8 DQGIGHFVRCVPDTAKAMAFYTEVLGFVLSDIIDIQMGPETSVPAHFLHCNGRH--HTIALAAFP------IPKRIHHFM   79 (156)
T ss_dssp             GGCSCEEEEECSCHHHHHHHHHHTTCCEEEEEEEEEEETTEEEEEEEEESSSBS--CSEEEECCS------CSSSEEEEE
T ss_pred             CCCcceEEEecCCHHHHHHHHHHhcCceeeeEEeeccCCCCcceeEEEeecccc--ceeeeccCC------CCCceeEEE
Confidence            468999999999999999999999999987653321   112234445443322  222222211      123799999


Q ss_pred             EEeCC---HHHHHHHHHHcCCeeecCCeecCCCceEEEEEECCCCC-EEEEEeCC
Q 022818           98 IATED---VYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGY-IFELIQRG  148 (291)
Q Consensus        98 ~~v~d---~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~Dp~G~-~iel~~~~  148 (291)
                      |+|++   +.+++++|+++|+.+. .|.....+...++|++||+|+ .+|+....
T Consensus        80 f~v~~~ddv~~~~d~l~~~G~~~~-g~~rH~~~~~~s~Y~~DP~G~~~~E~~~~~  133 (156)
T d1kw3b2          80 LQANTIDDVGYAFDRLDAAGRITS-LLGRHTNDQTLSFYADTPSPMIEVEFGWGP  133 (156)
T ss_dssp             EEBSSHHHHHHHHHHHHHTTCBCB-CSEEESSSCCEEEEEECSSTTCEEEEEECC
T ss_pred             EECCCHHHHHHHHHHHHhcCCcee-cCcccCCCCeEEEEEECCCCCeEEEEecCC
Confidence            99975   5567899999998654 445544444446999999998 58987754

>d1ecsa_ d.32.1.2 (A:) Bleomycin resistance protein, BRP {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Bleomycin resistance protein, BRP
species: Klebsiella pneumoniae [TaxId: 573]

Probab=99.61  E-value=7.6e-15  Score=104.80  Aligned_cols=106  Identities=23%  Similarity=0.322  Sum_probs=74.5

Q ss_pred             EeeeCChhhhHHHHHHhcCCeeeeeeccCCccceEEEeccccCCceeEEEEeeecCcceeecCcceeEEEEEecchHHhH
Q 022818          158 MLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDVYKSA  237 (291)
Q Consensus       158 ~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~hi~~~v~di~~~~  237 (291)
                      .|.|+|+++|.+||++ |||++....+    .+..+...      ...+.+......   .......++++.++++++++
T Consensus         7 ~l~v~Dl~~s~~FY~~-LGf~~~~~~~----~~~~~~~~------~~~~~~~~~~~~---~~~~~~~~~~~~~~d~~~~~   72 (120)
T d1ecsa_           7 NLPSRDFDSTAAFYER-LGFGIVFRDA----GWMILQRG------DLMLEFFAHPGL---DPLASWFSCCLRLDDLAEFY   72 (120)
T ss_dssp             EEEESCHHHHHHHHHT-TTCEEEEECS----SEEEEEET------TEEEEEEECTTC---CGGGCCCEEEEEESCHHHHH
T ss_pred             EEEeCCHHHHHHHHHH-cCCeeEEecC----ceeeeecc------eecccccccccc---ccCCCCcEEEEEECCHHHHH
Confidence            4999999999999987 9999876432    12222222      223333222221   12234568999999999999


Q ss_pred             HHHHHHHHHhCCeeec-------CCccCCCCCceEEEEECCCCceEEEeech
Q 022818          238 EVVNLVTQELGGKITR-------QPGSIPGLNTKITSFVDPDGWKTVLVDNE  282 (291)
Q Consensus       238 ~~l~~~~~~~G~~~~~-------~~~~~~~~~~~~~~~~DpdG~~iel~~~~  282 (291)
                      +.+    +++|+.+..       +|...++ |.+.+||+|||||+|||+|.+
T Consensus        73 ~~~----~~~~~~~~~~~~~~~~~~~~~~~-G~r~~~~~DPDGn~iei~q~d  119 (120)
T d1ecsa_          73 RQC----KSVGIQETSSGYPRIHAPELQGW-GGTMAALVDPDGTLLRLIQNE  119 (120)
T ss_dssp             HHH----HHTTCCBCSSSSSEEEEEEECTT-SSEEEEEECTTSCEEEEEECC
T ss_pred             HHH----hhhhhhhccccccccccceecCC-CcEEEEEECCCCCEEEEEEcc
Confidence            999    887777643       4556666 468999999999999999864

>d1ecsa_ d.32.1.2 (A:) Bleomycin resistance protein, BRP {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Bleomycin resistance protein, BRP
species: Klebsiella pneumoniae [TaxId: 573]

Probab=99.58  E-value=1.5e-14  Score=103.23  Aligned_cols=106  Identities=23%  Similarity=0.301  Sum_probs=75.1

Q ss_pred             EEEeCCHHHHHHHHHhhcCCEEEEEeecCCCceeEEEEecCCCCcceEEEeeecCCCCcccCCCCceEEEEEeCCHHHHH
Q 022818           28 VYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIATEDVYKLV  107 (291)
Q Consensus        28 ~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~~~~i~~~v~d~~~~~  107 (291)
                      .|.|+|+++|.+||++ |||++.....      ....+..+..  .  +.+.......+   .....++++.++|+++++
T Consensus         7 ~l~v~Dl~~s~~FY~~-LGf~~~~~~~------~~~~~~~~~~--~--~~~~~~~~~~~---~~~~~~~~~~~~d~~~~~   72 (120)
T d1ecsa_           7 NLPSRDFDSTAAFYER-LGFGIVFRDA------GWMILQRGDL--M--LEFFAHPGLDP---LASWFSCCLRLDDLAEFY   72 (120)
T ss_dssp             EEEESCHHHHHHHHHT-TTCEEEEECS------SEEEEEETTE--E--EEEEECTTCCG---GGCCCEEEEEESCHHHHH
T ss_pred             EEEeCCHHHHHHHHHH-cCCeeEEecC------ceeeeeccee--c--ccccccccccc---CCCCcEEEEEECCHHHHH
Confidence            3999999999999998 9999976533      1233333221  1  22222221111   123457899999999999


Q ss_pred             HHHHHcCCeeec-------CCeecCCCceEEEEEECCCCCEEEEEeCC
Q 022818          108 ENIRAKGGNVTR-------EPGPLKGGTTHIAFVKDPDGYIFELIQRG  148 (291)
Q Consensus       108 ~~l~~~G~~~~~-------~~~~~~~g~~~~~~~~Dp~G~~iel~~~~  148 (291)
                      +.+++.|+.+..       +|...++|.+. ++|+|||||+|+++|.+
T Consensus        73 ~~~~~~~~~~~~~~~~~~~~~~~~~~G~r~-~~~~DPDGn~iei~q~d  119 (120)
T d1ecsa_          73 RQCKSVGIQETSSGYPRIHAPELQGWGGTM-AALVDPDGTLLRLIQNE  119 (120)
T ss_dssp             HHHHHTTCCBCSSSSSEEEEEEECTTSSEE-EEEECTTSCEEEEEECC
T ss_pred             HHHhhhhhhhccccccccccceecCCCcEE-EEEECCCCCEEEEEEcc
Confidence            999999887643       45677787765 89999999999999864

>d1cjxa1 d.32.1.3 (A:4-153) 4-hydroxyphenylpyruvate dioxygenase, HppD {Pseudomonas fluorescens [TaxId: 294]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Pseudomonas fluorescens [TaxId: 294]

Probab=99.55  E-value=7.9e-15  Score=108.41  Aligned_cols=126  Identities=10%  Similarity=0.049  Sum_probs=92.9

Q ss_pred             CcceeeEEEEEEeCCHHHHHHHHHhhcCCEEEEEeecCCCceeEEEEecCCCCcceEEEeeecCCCCcc--cCCCCceEE
Q 022818           19 KDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSY--DIGTGFGHF   96 (291)
Q Consensus        19 ~~~~~i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~--~~g~~~~~i   96 (291)
                      ..+.+|+||++.|+|++++.+||++ |||+.+.+.....    ...++.  +...+++..........+  .+|++++||
T Consensus         5 ~g~~Gidhv~fav~d~~~~~~~~~~-lGF~~~~~~~~~~----~~l~~~--G~i~ll~~~~~~s~~~~~~~~hg~gv~hi   77 (150)
T d1cjxa1           5 MGLMGFEFIEFASPTPGTLEPIFEI-MGFTKVATHRSKN----VHLYRQ--GEINLILNNEPNSIASYFAAEHGPSVCGM   77 (150)
T ss_dssp             TCEEEEEEEEEECSSTTSSHHHHHH-TTCEEEEEESSSS----EEEEEE--TTEEEEEECCSSSHHHHHHHHHSSEEEEE
T ss_pred             CccCCEEEEEEecCCHHHHHHHHHH-hCCEEEecccceE----EEEEec--CcEEEEecCCCCCHhHhHHhhCCCceEEE
Confidence            4699999999999999999999987 9999988765332    333443  345555543322222222  268899999


Q ss_pred             EEEeCCHHHHHHHHHHcCCeeecCCeecCCCceEEEEEECCCCCEEEEEeCCCCCCC
Q 022818           97 AIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRGPTPEP  153 (291)
Q Consensus        97 ~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~Dp~G~~iel~~~~~~~~~  153 (291)
                      ||+|+|++++++++.++|+++...|.. + |...+..+++|+|.++.|+++.+...+
T Consensus        78 af~V~D~~~a~~~a~~~Ga~~i~~~~~-~-g~~~~~~i~g~gg~~i~Fv~~~~~~~~  132 (150)
T d1cjxa1          78 AFRVKDSQKAYNRALELGAQPIHIDTG-P-MELNLPAIKGIGGAPLYLIDRFGEGSS  132 (150)
T ss_dssp             EEEESCHHHHHHHHHHTTCCBCCCCCC-T-TCBCCCEEECGGGCEEEEECCCSSSCC
T ss_pred             EEEeCCHHHHHHHHHHCCCEEcccCCC-C-CceeeeEEEcCCCCEEEEECcCCCCCc
Confidence            999999999999999999997766533 2 233347789999999999997664443

>d1xy7a_ d.32.1.9 (A:) Hypothetical protein At5g48480 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Hypothetical protein At5g48480
domain: Hypothetical protein At5g48480
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.54  E-value=1.3e-14  Score=105.78  Aligned_cols=115  Identities=12%  Similarity=0.115  Sum_probs=76.4

Q ss_pred             EEeeeCChhhhHHHHHHhcCCeeeeeeccCCc-------cceEEEeccccCCceeEEEEeeecC---cceeecCcceeEE
Q 022818          157 VMLRVGDLGRSIKFYEKALGMKLLRTVDKPEY-------KYTLAMLGYAEEDQTTVLELTYNYG---VTEYTKGNAYAQV  226 (291)
Q Consensus       157 v~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~l~l~~~~~---~~~~~~~~~~~hi  226 (291)
                      +.+.+.|.++|++||+++||+++......+++       ......+..+    ...+.+.....   ..+........+|
T Consensus        11 l~v~~~~~~eAi~FY~~~fG~~~~~~~~~~~~~~~~~~~~~~~a~l~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~l   86 (135)
T d1xy7a_          11 LLVEAQKVGDAVTFYKSAFGAIESGHSLYPKRKLDQELPHVLSSELNLA----GSSFVVCDVSSLPGFSTAKSEGSGVTF   86 (135)
T ss_dssp             EEECTTCHHHHHHHHHHHHCCEEC---------------CCCEEEEEET----TEEEEEEEGGGSTTCCCCCTTSCCCEE
T ss_pred             EEEECCCHHHHHHHHHHHhCCEEEEEEecCCccccccCCcEEEEEEEEC----CeeeeccccccccccccCCCCCcceEE
Confidence            45666799999999999999998765543221       1122223221    12222222111   1111122234689


Q ss_pred             EEEecchHHhHHHHHHHHHHhCCeeecCCccCCCCCceEEEEECCCCceEEEee
Q 022818          227 AISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVD  280 (291)
Q Consensus       227 ~~~v~di~~~~~~l~~~~~~~G~~~~~~~~~~~~~~~~~~~~~DpdG~~iel~~  280 (291)
                      ++.++|+++++.++    +++|++++.+|...++ |.+.++|+||+|+.|+|.|
T Consensus        87 ~~~v~d~~~~~~~~----~~~g~~~~~~~~~~~~-g~~~~~v~Dp~G~~W~i~e  135 (135)
T d1xy7a_          87 LLGTKDAEAAVAKA----VDAGAVKVEVTEAEVE-LGFKGKVTDPFGVTWIFAE  135 (135)
T ss_dssp             EEECSCHHHHHHHH----HHTTCEECCCCHHHHH-TTEEEEEECTTSCEEEEEC
T ss_pred             EEeecCcceeEEEe----ecccceEecCcccccc-cCEEEEEECCCCCEEEEeC
Confidence            99999999999999    9999999999999888 4689999999999999986

>d1jifa_ d.32.1.2 (A:) Bleomycin resistance protein, BRP {Streptomyces verticillus [TaxId: 29309]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Bleomycin resistance protein, BRP
species: Streptomyces verticillus [TaxId: 29309]

Probab=99.54  E-value=8.1e-14  Score=99.51  Aligned_cols=105  Identities=13%  Similarity=0.044  Sum_probs=72.5

Q ss_pred             EEEeCCHHHHHHHHHhhcCCEEEEEeecCCCceeEEEEecCCCCcceEEEeeecCCCCcccCCCCceEEEEEeCCHHHHH
Q 022818           28 VYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIATEDVYKLV  107 (291)
Q Consensus        28 ~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~~~~i~~~v~d~~~~~  107 (291)
                      .|.|+|++++++||+++|||++....+      ...++..++.    .+.+.......    .....++.+.+.|+++++
T Consensus        10 vL~v~Dl~~s~~FY~~vLG~~~~~~~~------~~~~~~~~~~----~l~l~~~~~~~----~~~~~~~~~~~~~i~~~~   75 (122)
T d1jifa_          10 VLTAVDVPANVSFWVDTLGFEKDFGDR------DFAGVRRGDI----RLHISRTEHQI----VADNTSAWIEVTDPDALH   75 (122)
T ss_dssp             EEEESSHHHHHHHHHHTTCCEEEEECS------SEEEEEETTE----EEEEEECSCHH----HHTTCEEEEEESCHHHHH
T ss_pred             EEEcCCHHHHHHHHHhhhCCceEecCC------ceeEeeeeee----eeeeecccccc----ccceeEEEEeechhHHHH
Confidence            599999999999999999999876533      1344544432    23333322211    114457899999999999


Q ss_pred             HHHHHcCCeeecCCe-------ecCCCceEEEEEECCCCCEEEEEeC
Q 022818          108 ENIRAKGGNVTREPG-------PLKGGTTHIAFVKDPDGYIFELIQR  147 (291)
Q Consensus       108 ~~l~~~G~~~~~~~~-------~~~~g~~~~~~~~Dp~G~~iel~~~  147 (291)
                      +++++.+......+.       ...+|.+ .+||+|||||+|+|...
T Consensus        76 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~-~~~~~DPdGn~ief~~~  121 (122)
T d1jifa_          76 EEWARAVSTDYADTSGPAMTPVGESPAGR-EFAVRDPAGNCVHFTAG  121 (122)
T ss_dssp             HHHHTTSCSCTTCTTSCEECCCEEETTEE-EEEEECTTCCEEEEEEC
T ss_pred             HHHHhhcceEEeeccccccCccccCCCeE-EEEEECCCCCEEEEEeC
Confidence            999999876543321       1223343 59999999999999864

>d1xy7a_ d.32.1.9 (A:) Hypothetical protein At5g48480 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Hypothetical protein At5g48480
domain: Hypothetical protein At5g48480
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.54  E-value=2e-14  Score=104.75  Aligned_cols=118  Identities=16%  Similarity=0.135  Sum_probs=79.8

Q ss_pred             EEEEEeCCHHHHHHHHHhhcCCEEEEEeecCC-------CceeEEEEecCCCCcceEEEeeec-CCCCcccCCCCceEEE
Q 022818           26 HAVYRVGDLDRTIKFYTECFGMKLLRKRDVPE-------EKYSNAFLGFGPEQSHFVVELTYN-YGVTSYDIGTGFGHFA   97 (291)
Q Consensus        26 hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~g~~~~~i~   97 (291)
                      ++.+.++|+++|++||+++||+++..+...++       +......+.+++.  .+.+..... .............+++
T Consensus        10 ~l~v~~~~~~eAi~FY~~~fG~~~~~~~~~~~~~~~~~~~~~~~a~l~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~l~   87 (135)
T d1xy7a_          10 MLLVEAQKVGDAVTFYKSAFGAIESGHSLYPKRKLDQELPHVLSSELNLAGS--SFVVCDVSSLPGFSTAKSEGSGVTFL   87 (135)
T ss_dssp             EEEECTTCHHHHHHHHHHHHCCEEC---------------CCCEEEEEETTE--EEEEEEGGGSTTCCCCCTTSCCCEEE
T ss_pred             EEEEECCCHHHHHHHHHHHhCCEEEEEEecCCccccccCCcEEEEEEEECCe--eeeccccccccccccCCCCCcceEEE
Confidence            45666779999999999999999876543322       1223445555432  122211111 1111222222345899


Q ss_pred             EEeCCHHHHHHHHHHcCCeeecCCeecCCCceEEEEEECCCCCEEEEEe
Q 022818           98 IATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQ  146 (291)
Q Consensus        98 ~~v~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~Dp~G~~iel~~  146 (291)
                      +.|+|+++++.++.++|+++..++...+||.+. ++|+||+|+.|+|.|
T Consensus        88 ~~v~d~~~~~~~~~~~g~~~~~~~~~~~~g~~~-~~v~Dp~G~~W~i~e  135 (135)
T d1xy7a_          88 LGTKDAEAAVAKAVDAGAVKVEVTEAEVELGFK-GKVTDPFGVTWIFAE  135 (135)
T ss_dssp             EECSCHHHHHHHHHHTTCEECCCCHHHHHTTEE-EEEECTTSCEEEEEC
T ss_pred             EeecCcceeEEEeecccceEecCcccccccCEE-EEEECCCCCEEEEeC
Confidence            999999999999999999999999999998875 899999999999875

>d1jifa_ d.32.1.2 (A:) Bleomycin resistance protein, BRP {Streptomyces verticillus [TaxId: 29309]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Bleomycin resistance protein, BRP
species: Streptomyces verticillus [TaxId: 29309]

Probab=99.52  E-value=9.1e-14  Score=99.25  Aligned_cols=105  Identities=12%  Similarity=0.035  Sum_probs=73.4

Q ss_pred             EeeeCChhhhHHHHHHhcCCeeeeeeccCCccceEEEeccccCCceeEEEEeeecCcceeecCcceeEEEEEecchHHhH
Q 022818          158 MLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDVYKSA  237 (291)
Q Consensus       158 ~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~hi~~~v~di~~~~  237 (291)
                      .|.|+|+++|++||+++|||++....+    .+..+..+      ...+.+......    ...+..++.+.++|++.+.
T Consensus        10 vL~v~Dl~~s~~FY~~vLG~~~~~~~~----~~~~~~~~------~~~l~l~~~~~~----~~~~~~~~~~~~~~i~~~~   75 (122)
T d1jifa_          10 VLTAVDVPANVSFWVDTLGFEKDFGDR----DFAGVRRG------DIRLHISRTEHQ----IVADNTSAWIEVTDPDALH   75 (122)
T ss_dssp             EEEESSHHHHHHHHHHTTCCEEEEECS----SEEEEEET------TEEEEEEECSCH----HHHTTCEEEEEESCHHHHH
T ss_pred             EEEcCCHHHHHHHHHhhhCCceEecCC----ceeEeeee------eeeeeeeccccc----cccceeEEEEeechhHHHH
Confidence            489999999999999999999765432    13333222      244444432222    2234568999999999999


Q ss_pred             HHHHHHHHHhCCeeecCCcc-------CCCCCceEEEEECCCCceEEEeec
Q 022818          238 EVVNLVTQELGGKITRQPGS-------IPGLNTKITSFVDPDGWKTVLVDN  281 (291)
Q Consensus       238 ~~l~~~~~~~G~~~~~~~~~-------~~~~~~~~~~~~DpdG~~iel~~~  281 (291)
                      +++    ++++......+..       .++ +++.+||+|||||+|||...
T Consensus        76 ~~~----~~~~~~~~~~~~~~~~~~~~~~~-g~~~~~~~DPdGn~ief~~~  121 (122)
T d1jifa_          76 EEW----ARAVSTDYADTSGPAMTPVGESP-AGREFAVRDPAGNCVHFTAG  121 (122)
T ss_dssp             HHH----HTTSCSCTTCTTSCEECCCEEET-TEEEEEEECTTCCEEEEEEC
T ss_pred             HHH----HhhcceEEeeccccccCccccCC-CeEEEEEECCCCCEEEEEeC
Confidence            999    8887765544322       122 35899999999999999864

>d1xrka_ d.32.1.2 (A:) Bleomycin resistance protein, BRP {Streptoalloteichus hindustanus [TaxId: 2017]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Bleomycin resistance protein, BRP
species: Streptoalloteichus hindustanus [TaxId: 2017]

Probab=99.48  E-value=3.1e-13  Score=96.01  Aligned_cols=108  Identities=14%  Similarity=0.117  Sum_probs=71.6

Q ss_pred             EEeeeCChhhhHHHHHHhcCCeeeeeeccCCccceEEEeccccCCceeEEEEeeecCcceeecCcceeEEEEEecchHHh
Q 022818          157 VMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDVYKS  236 (291)
Q Consensus       157 v~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~hi~~~v~di~~~  236 (291)
                      -.|.|+|++++++||+++|||++..+.+.    +..+..+      ...+.+......    ...+..++.+.+++++..
T Consensus         8 pvL~v~D~~~s~~FY~~~LG~~~~~~~~~----~~~~~~~------~~~l~~~~~~~~----~~~~~~~~~~~~~~~~~~   73 (120)
T d1xrka_           8 PVLTARDVAEAVEFWTDRLGFSRVFVEDD----FAGVVRD------DVTLFISAVQDQ----VVPDNTQAWVWVRGLDEL   73 (120)
T ss_dssp             EEEEESCHHHHHHHHHHTTCCEEEEECSS----EEEEEET------TEEEEEEECSCT----TTGGGCEEEEEEECHHHH
T ss_pred             EEEEECCHHHHHHHHHHhhCCeEEEECCC----eeEEecc------cceeeccccccc----cCCCCceEEEeeccHHHH
Confidence            35899999999999999999998766431    2333222      233444332222    223556888999998888


Q ss_pred             HHHHHHH----HHHhCCeeecCCccCCCCCceEEEEECCCCceEEEee
Q 022818          237 AEVVNLV----TQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVD  280 (291)
Q Consensus       237 ~~~l~~~----~~~~G~~~~~~~~~~~~~~~~~~~~~DpdG~~iel~~  280 (291)
                      .+.+.++    +.+.|.....+|...++  ++.+||+|||||+|||..
T Consensus        74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--g~~~~~~DPdGn~ief~~  119 (120)
T d1xrka_          74 YAEWSEVVSTNFRDASGPAMTEIVEQPW--GREFALRDPAGNCVHFVA  119 (120)
T ss_dssp             HHHHTTTSBSCTTTCSSCEECCCEEETT--EEEEEEECTTCCEEEEEE
T ss_pred             HHHHHHhhhHHhhhcccccccCceecCC--EEEEEEECCCCCEEEEEE
Confidence            8777211    12334444455555555  478999999999999986

>d1xrka_ d.32.1.2 (A:) Bleomycin resistance protein, BRP {Streptoalloteichus hindustanus [TaxId: 2017]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Bleomycin resistance protein, BRP
species: Streptoalloteichus hindustanus [TaxId: 2017]

Probab=99.39  E-value=2.2e-12  Score=91.41  Aligned_cols=106  Identities=12%  Similarity=0.070  Sum_probs=71.8

Q ss_pred             EEEEEEeCCHHHHHHHHHhhcCCEEEEEeecCCCceeEEEEecCCCCcceEEEeeecCCCCcccCCCCceEEEEEeCCHH
Q 022818           25 LHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIATEDVY  104 (291)
Q Consensus        25 ~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~~~~i~~~v~d~~  104 (291)
                      .+..|.|+|++++++||+++|||++..+.+      ....+..++.  .+.+.  ......    ..+..++.+.+.+++
T Consensus         6 ~~pvL~v~D~~~s~~FY~~~LG~~~~~~~~------~~~~~~~~~~--~l~~~--~~~~~~----~~~~~~~~~~~~~~~   71 (120)
T d1xrka_           6 AVPVLTARDVAEAVEFWTDRLGFSRVFVED------DFAGVVRDDV--TLFIS--AVQDQV----VPDNTQAWVWVRGLD   71 (120)
T ss_dssp             EEEEEEESCHHHHHHHHHHTTCCEEEEECS------SEEEEEETTE--EEEEE--ECSCTT----TGGGCEEEEEEECHH
T ss_pred             EEEEEEECCHHHHHHHHHHhhCCeEEEECC------CeeEEecccc--eeecc--cccccc----CCCCceEEEeeccHH
Confidence            345599999999999999999999987643      1344444432  22222  222111    124567788999999


Q ss_pred             HHHHHHHHcCCe--------eecCCeecCCCceEEEEEECCCCCEEEEEe
Q 022818          105 KLVENIRAKGGN--------VTREPGPLKGGTTHIAFVKDPDGYIFELIQ  146 (291)
Q Consensus       105 ~~~~~l~~~G~~--------~~~~~~~~~~g~~~~~~~~Dp~G~~iel~~  146 (291)
                      ..++.+.+...+        ...++.+.++| . .+||+|||||+|||+.
T Consensus        72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g-~-~~~~~DPdGn~ief~~  119 (120)
T d1xrka_          72 ELYAEWSEVVSTNFRDASGPAMTEIVEQPWG-R-EFALRDPAGNCVHFVA  119 (120)
T ss_dssp             HHHHHHTTTSBSCTTTCSSCEECCCEEETTE-E-EEEEECTTCCEEEEEE
T ss_pred             HHHHHHHHhhhHHhhhcccccccCceecCCE-E-EEEEECCCCCEEEEEE
Confidence            988887765543        34455666655 3 4899999999999975

>d1cjxa1 d.32.1.3 (A:4-153) 4-hydroxyphenylpyruvate dioxygenase, HppD {Pseudomonas fluorescens [TaxId: 294]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Pseudomonas fluorescens [TaxId: 294]

Probab=99.37  E-value=2.6e-12  Score=94.62  Aligned_cols=118  Identities=14%  Similarity=0.089  Sum_probs=85.7

Q ss_pred             CCceEEEeeeCChhhhHHHHHHhcCCeeeeeeccCCccceEEEeccccCCceeEEEEeeecCcce----eecCcceeEEE
Q 022818          152 EPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTE----YTKGNAYAQVA  227 (291)
Q Consensus       152 ~~~~~v~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~----~~~~~~~~hi~  227 (291)
                      .+++||.+.|+|++++.+||++ |||+++.......  ..+  ++  .+  ...+.+........    ...|+++.|||
T Consensus         8 ~Gidhv~fav~d~~~~~~~~~~-lGF~~~~~~~~~~--~~l--~~--~G--~i~ll~~~~~~s~~~~~~~~hg~gv~hia   78 (150)
T d1cjxa1           8 MGFEFIEFASPTPGTLEPIFEI-MGFTKVATHRSKN--VHL--YR--QG--EINLILNNEPNSIASYFAAEHGPSVCGMA   78 (150)
T ss_dssp             EEEEEEEEECSSTTSSHHHHHH-TTCEEEEEESSSS--EEE--EE--ET--TEEEEEECCSSSHHHHHHHHHSSEEEEEE
T ss_pred             CCEEEEEEecCCHHHHHHHHHH-hCCEEEecccceE--EEE--Ee--cC--cEEEEecCCCCCHhHhHHhhCCCceEEEE
Confidence            4689999999999999999987 9999887654322  222  23  11  23333322221111    23778999999


Q ss_pred             EEecchHHhHHHHHHHHHHhCCeeecCCccCCCCCceEEEEECCCCceEEEeechhh
Q 022818          228 ISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNEDF  284 (291)
Q Consensus       228 ~~v~di~~~~~~l~~~~~~~G~~~~~~~~~~~~~~~~~~~~~DpdG~~iel~~~~~~  284 (291)
                      |.|+|++++++++    +++|++++..|... + ...+..++.|+|.++.|+++...
T Consensus        79 f~V~D~~~a~~~a----~~~Ga~~i~~~~~~-g-~~~~~~i~g~gg~~i~Fv~~~~~  129 (150)
T d1cjxa1          79 FRVKDSQKAYNRA----LELGAQPIHIDTGP-M-ELNLPAIKGIGGAPLYLIDRFGE  129 (150)
T ss_dssp             EEESCHHHHHHHH----HHTTCCBCCCCCCT-T-CBCCCEEECGGGCEEEEECCCSS
T ss_pred             EEeCCHHHHHHHH----HHCCCEEcccCCCC-C-ceeeeEEEcCCCCEEEEECcCCC
Confidence            9999999999999    99999988776542 2 23578899999999999998653

>d1cjxa2 d.32.1.3 (A:154-356) 4-hydroxyphenylpyruvate dioxygenase, HppD {Pseudomonas fluorescens [TaxId: 294]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Pseudomonas fluorescens [TaxId: 294]

Probab=99.31  E-value=7.7e-12  Score=96.59  Aligned_cols=101  Identities=18%  Similarity=0.182  Sum_probs=70.8

Q ss_pred             ceeeEEEEEEeC--CHHHHHHHHHhhcCCEEEEEeecCCCce--eEEEEecCCCCcceEEEeeecCCCC---c---ccCC
Q 022818           21 KRRFLHAVYRVG--DLDRTIKFYTECFGMKLLRKRDVPEEKY--SNAFLGFGPEQSHFVVELTYNYGVT---S---YDIG   90 (291)
Q Consensus        21 ~~~i~hv~l~v~--d~~~~~~FY~~~lG~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~~~~~~~~---~---~~~g   90 (291)
                      +.+|+||++.|+  |+++++.||+++|||+.....+.++...  ....+........+.+........+   .   ...|
T Consensus         3 l~~IDHIa~~V~~~~l~~a~~FY~~vlGf~~~~~~di~~~~~~l~s~~~~~~~~~~~~~l~~~~~~~~sqi~~fl~~~~g   82 (203)
T d1cjxa2           3 LKVIDHLTHNVYRGRMVYWANFYEKLFNFREARYFDIKGEYTGLTSKAMSAPDGMIRIPLNEESSKGAGQIEEFLMQFNG   82 (203)
T ss_dssp             EEEEEEECEECCTTHHHHHHHHHHHHHCCEEEEEEEEECSSCEEEEEEEECTTSSCEEEEEEECTTCCSHHHHHHHHHTS
T ss_pred             CCeeCeeEeccChhhHHHHHHHHHHHhCCEEeEEEecCCCcceEEEEEeeccccccceecccCCCCCccHHHHHHHhcCC
Confidence            689999999998  9999999999999999988766554432  2233333222222222222111111   1   1256


Q ss_pred             CCceEEEEEeCCHHHHHHHHHHcCCeeecCC
Q 022818           91 TGFGHFAIATEDVYKLVENIRAKGGNVTREP  121 (291)
Q Consensus        91 ~~~~~i~~~v~d~~~~~~~l~~~G~~~~~~~  121 (291)
                      .|++||||.|+|+.++.++|+++|+++...|
T Consensus        83 ~GiqHIAf~vdDI~aav~~L~~~Gv~fL~~p  113 (203)
T d1cjxa2          83 EGIQHVAFLTDDLVKTWDALKKIGMRFMTAP  113 (203)
T ss_dssp             SBCCEEEEEESCHHHHHHHHHHTTCCBCCCC
T ss_pred             CCCceEEEEeCCHHHHHHHHHhcCCccccCc
Confidence            7999999999999999999999999877643

>d1cjxa2 d.32.1.3 (A:154-356) 4-hydroxyphenylpyruvate dioxygenase, HppD {Pseudomonas fluorescens [TaxId: 294]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Pseudomonas fluorescens [TaxId: 294]

Probab=99.31  E-value=3.3e-12  Score=98.73  Aligned_cols=100  Identities=19%  Similarity=0.205  Sum_probs=69.8

Q ss_pred             CceEEEeeeC--ChhhhHHHHHHhcCCeeeeeeccCCccceEEEeccccCCceeEEEEeeecCc-ce-------eecCcc
Q 022818          153 PLCQVMLRVG--DLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGV-TE-------YTKGNA  222 (291)
Q Consensus       153 ~~~~v~l~v~--d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~-~~-------~~~~~~  222 (291)
                      +|+||++.|+  |++++..||+++|||++....+..+....+......+......+.+..+... .+       ...|+|
T Consensus         5 ~IDHIa~~V~~~~l~~a~~FY~~vlGf~~~~~~di~~~~~~l~s~~~~~~~~~~~~~l~~~~~~~~sqi~~fl~~~~g~G   84 (203)
T d1cjxa2           5 VIDHLTHNVYRGRMVYWANFYEKLFNFREARYFDIKGEYTGLTSKAMSAPDGMIRIPLNEESSKGAGQIEEFLMQFNGEG   84 (203)
T ss_dssp             EEEEECEECCTTHHHHHHHHHHHHHCCEEEEEEEEECSSCEEEEEEEECTTSSCEEEEEEECTTCCSHHHHHHHHHTSSB
T ss_pred             eeCeeEeccChhhHHHHHHHHHHHhCCEEeEEEecCCCcceEEEEEeeccccccceecccCCCCCccHHHHHHHhcCCCC
Confidence            6899999997  8999999999999999887765444322322222112222333333322211 11       225679


Q ss_pred             eeEEEEEecchHHhHHHHHHHHHHhCCeeecCCc
Q 022818          223 YAQVAISTDDVYKSAEVVNLVTQELGGKITRQPG  256 (291)
Q Consensus       223 ~~hi~~~v~di~~~~~~l~~~~~~~G~~~~~~~~  256 (291)
                      ++||||.|+||.+++++|    +++|++++..|.
T Consensus        85 iqHIAf~vdDI~aav~~L----~~~Gv~fL~~pp  114 (203)
T d1cjxa2          85 IQHVAFLTDDLVKTWDAL----KKIGMRFMTAPP  114 (203)
T ss_dssp             CCEEEEEESCHHHHHHHH----HHTTCCBCCCCC
T ss_pred             CceEEEEeCCHHHHHHHH----HhcCCccccCch
Confidence            999999999999999999    999999987764

>d1t47a2 d.32.1.3 (A:179-377) 4-hydroxyphenylpyruvate dioxygenase, HppD {Streptomyces avermitilis [TaxId: 33903]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Streptomyces avermitilis [TaxId: 33903]

Probab=99.29  E-value=1.3e-11  Score=94.54  Aligned_cols=98  Identities=11%  Similarity=0.223  Sum_probs=68.3

Q ss_pred             CCceEEEeeeC--ChhhhHHHHHHhcCCeeeeeeccC-----CccceEEEeccccCCceeEEEEeeecCc---ce-----
Q 022818          152 EPLCQVMLRVG--DLGRSIKFYEKALGMKLLRTVDKP-----EYKYTLAMLGYAEEDQTTVLELTYNYGV---TE-----  216 (291)
Q Consensus       152 ~~~~~v~l~v~--d~~~~~~fy~~~lG~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~l~l~~~~~~---~~-----  216 (291)
                      ..|+||++.|+  ++++++.||+++|||++......+     ........+..++  ....+.+..+...   ++     
T Consensus         5 ~~IDHia~avp~~~l~~av~fY~~vfGf~~~~~~~~~di~~~~~~l~s~~~~s~~--~~v~l~lne~~~~~~~s~i~~FL   82 (199)
T d1t47a2           5 QAIDHCVGNVELGRMNEWVGFYNKVMGFTNMKEFVGDDIATEYSALMSKVVADGT--LKVKFPINEPALAKKKSQIDEYL   82 (199)
T ss_dssp             CEEEEEEEECCTTCHHHHHHHHHHHHCCEECSCCBCHHHHTTTTSEEEEEEECTT--SCSEEEEEEECCSSSCCHHHHHH
T ss_pred             eeeCceEeccChhhHHHHHHHHHHHhCCeEeeEecccccccceeEEEEeeccccc--cccceeecccCccccccchhhhh
Confidence            46999999998  999999999999999977654321     2222222223222  2333433322211   11     


Q ss_pred             -eecCcceeEEEEEecchHHhHHHHHHHHHHhCCeeecCC
Q 022818          217 -YTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQP  255 (291)
Q Consensus       217 -~~~~~~~~hi~~~v~di~~~~~~l~~~~~~~G~~~~~~~  255 (291)
                       ...|+|++||||.|+||.+++++|    +++|++++..|
T Consensus        83 ~~~~g~GiQHIAl~tdDI~~av~~L----~~~G~~fL~~p  118 (199)
T d1t47a2          83 EFYGGAGVQHIALNTGDIVETVRTM----RAAGVQFLDTP  118 (199)
T ss_dssp             HHHTSCEEEEEEEECSCHHHHHHHH----HHTTCCBCCCC
T ss_pred             hhcCCCcceEEEEEcCCHHHHHHHH----HHcCCCCCCCC
Confidence             235679999999999999999999    99999999888

>d1sqia2 d.32.1.3 (A:157-366) 4-hydroxyphenylpyruvate dioxygenase, HppD {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.27  E-value=2.5e-11  Score=93.69  Aligned_cols=107  Identities=17%  Similarity=0.230  Sum_probs=73.4

Q ss_pred             CCCCcceeeEEEEEEeCC--HHHHHHHHHhhcCCEEEEEeec-----CCCceeEEEEecCCCCcceEEEeeecCCCC---
Q 022818           16 WPKKDKRRFLHAVYRVGD--LDRTIKFYTECFGMKLLRKRDV-----PEEKYSNAFLGFGPEQSHFVVELTYNYGVT---   85 (291)
Q Consensus        16 ~~~~~~~~i~hv~l~v~d--~~~~~~FY~~~lG~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~---   85 (291)
                      .+...+.+|+||++.|++  +++++.||+++|||......+.     +....+...+..++....+.+.........   
T Consensus        17 ~p~~gl~~IDHv~~~Vp~~~ld~av~fY~~vfGf~~~~~~~~~~i~~~~~~l~s~~l~s~~~~i~~~lne~~~~~~~sqi   96 (210)
T d1sqia2          17 LPSCNLEIIDHIVGNQPDQEMESASEWYLKNLQFHRFWSVDDTQVHTEYSSLRSIVVANYEESIKMPINEPAPGRKKSQI   96 (210)
T ss_dssp             SCCCCEEEEEEEEEECCTTCHHHHHHHHHHHHCCEEECCC-----------CEEEEEECTTSCCEEEEEECC-----CHH
T ss_pred             CCCCCcceeCceEeccCchhHHHHHHHHHHHhCCEEEEEecccccCCceeEEEEEEEEecCccccccccccCCCCcccHH
Confidence            345579999999999998  9999999999999997654321     112233444444444444444333222111   


Q ss_pred             -cc---cCCCCceEEEEEeCCHHHHHHHHHHcCCeeecCCe
Q 022818           86 -SY---DIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPG  122 (291)
Q Consensus        86 -~~---~~g~~~~~i~~~v~d~~~~~~~l~~~G~~~~~~~~  122 (291)
                       .+   ..|.|+.||||.|+|+.++.++|+++|+++...|.
T Consensus        97 ~~fl~~~~G~GiQHIAf~t~DI~~av~~L~~~Gv~fL~~P~  137 (210)
T d1sqia2          97 QEYVDYNGGAGVQHIALRTEDIITTIRHLRERGMEFLAVPS  137 (210)
T ss_dssp             HHHHHHHTSSEEEEEEEEESCHHHHHHHHHHHTCCBCCCCH
T ss_pred             HHHHhhcCCCCeeEEEEEcCCHHHHHHHHHHcCCCCCCCCc
Confidence             11   25889999999999999999999999999887764

>d1sp8a2 d.32.1.3 (A:208-431) 4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Zea mays) [TaxId: 4577]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Corn (Zea mays) [TaxId: 4577]

Probab=99.22  E-value=2.8e-11  Score=94.64  Aligned_cols=102  Identities=15%  Similarity=0.196  Sum_probs=69.1

Q ss_pred             CCceEEEeeeCChhhhHHHHHHhcCCeeeeeeccC-----CccceEEEeccccCCceeEEEEeeec---Ccce-------
Q 022818          152 EPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKP-----EYKYTLAMLGYAEEDQTTVLELTYNY---GVTE-------  216 (291)
Q Consensus       152 ~~~~~v~l~v~d~~~~~~fy~~~lG~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~l~l~~~~---~~~~-------  216 (291)
                      .+|+||++.|+|++++..||+++|||+........     ....+...+..+++  ...+.+....   ...+       
T Consensus         8 ~~IDHI~i~V~dld~a~~fY~~vLGf~~~~~~~~~~i~~~~~~l~s~v~~~~~g--~v~~~l~E~~~~~~~~s~i~~FL~   85 (224)
T d1sp8a2           8 SRFDHIVGNVPELAPAAAYFAGFTGFHEFAEFTTEDVGTAESGLNSMVLANNSE--NVLLPLNEPVHGTKRRSQIQTFLD   85 (224)
T ss_dssp             EEEEEEEEECSCHHHHHHHHHHHHCCEEEEEEEC--------CEEEEEEECSSS--CCEEEEEEECCCSSSCCHHHHHHH
T ss_pred             CeeeeeEEeccCHHHHHHHHHHHhCCEEEEEeccccccccceeEEEEEEEcCCC--ccceeeeeecCCCCCccHHHHHHH
Confidence            46999999999999999999999999987654322     22233333443332  3334443221   1111       


Q ss_pred             eecCcceeEEEEEecchHHhHHHHHHHHHHhCCeeecCC
Q 022818          217 YTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQP  255 (291)
Q Consensus       217 ~~~~~~~~hi~~~v~di~~~~~~l~~~~~~~G~~~~~~~  255 (291)
                      ...+.|++||||.|+||.+++++|+++..++|+++...|
T Consensus        86 ~~~g~GiqHIAf~vdDI~~av~~L~arGv~~G~~fl~~p  124 (224)
T d1sp8a2          86 HHGGPGVQHMALASDDVLRTLREMQARSAMGGFEFMAPP  124 (224)
T ss_dssp             HHTSSEEEEEEEEETTHHHHHHHHHTSGGGTSCCBCCCC
T ss_pred             hccCCCceeEEEEeCCHHHHHHHHHhccccccceecccc
Confidence            124679999999999999999999655556678777666

>d1sqia2 d.32.1.3 (A:157-366) 4-hydroxyphenylpyruvate dioxygenase, HppD {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.20  E-value=4.3e-11  Score=92.39  Aligned_cols=98  Identities=16%  Similarity=0.239  Sum_probs=67.5

Q ss_pred             CceEEEeeeCC--hhhhHHHHHHhcCCeeeeeeccC-----CccceEEEeccccCCceeEEEEeeecCcc--e-------
Q 022818          153 PLCQVMLRVGD--LGRSIKFYEKALGMKLLRTVDKP-----EYKYTLAMLGYAEEDQTTVLELTYNYGVT--E-------  216 (291)
Q Consensus       153 ~~~~v~l~v~d--~~~~~~fy~~~lG~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~l~l~~~~~~~--~-------  216 (291)
                      +|+||++.|++  ++++..||+++|||+..+..+..     ....+...+..+.+  ...+.+..+.+..  .       
T Consensus        24 ~IDHv~~~Vp~~~ld~av~fY~~vfGf~~~~~~~~~~i~~~~~~l~s~~l~s~~~--~i~~~lne~~~~~~~sqi~~fl~  101 (210)
T d1sqia2          24 IIDHIVGNQPDQEMESASEWYLKNLQFHRFWSVDDTQVHTEYSSLRSIVVANYEE--SIKMPINEPAPGRKKSQIQEYVD  101 (210)
T ss_dssp             EEEEEEEECCTTCHHHHHHHHHHHHCCEEECCC-----------CEEEEEECTTS--CCEEEEEECC-----CHHHHHHH
T ss_pred             eeCceEeccCchhHHHHHHHHHHHhCCEEEEEecccccCCceeEEEEEEEEecCc--cccccccccCCCCcccHHHHHHh
Confidence            59999999987  99999999999999976654321     12223333343333  3444443322211  1       


Q ss_pred             eecCcceeEEEEEecchHHhHHHHHHHHHHhCCeeecCCc
Q 022818          217 YTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPG  256 (291)
Q Consensus       217 ~~~~~~~~hi~~~v~di~~~~~~l~~~~~~~G~~~~~~~~  256 (291)
                      ...|+|++||||.|+||.+++++|    +++|++++..|.
T Consensus       102 ~~~G~GiQHIAf~t~DI~~av~~L----~~~Gv~fL~~P~  137 (210)
T d1sqia2         102 YNGGAGVQHIALRTEDIITTIRHL----RERGMEFLAVPS  137 (210)
T ss_dssp             HHTSSEEEEEEEEESCHHHHHHHH----HHHTCCBCCCCH
T ss_pred             hcCCCCeeEEEEEcCCHHHHHHHH----HHcCCCCCCCCc
Confidence            135789999999999999999999    999999998883

>d1t47a2 d.32.1.3 (A:179-377) 4-hydroxyphenylpyruvate dioxygenase, HppD {Streptomyces avermitilis [TaxId: 33903]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Streptomyces avermitilis [TaxId: 33903]

Probab=99.19  E-value=6.6e-11  Score=90.54  Aligned_cols=105  Identities=20%  Similarity=0.272  Sum_probs=73.3

Q ss_pred             CcceeeEEEEEEeC--CHHHHHHHHHhhcCCEEEEEeec-----CCCceeEEEEecCCCCcceEEEeeecCCCCc----c
Q 022818           19 KDKRRFLHAVYRVG--DLDRTIKFYTECFGMKLLRKRDV-----PEEKYSNAFLGFGPEQSHFVVELTYNYGVTS----Y   87 (291)
Q Consensus        19 ~~~~~i~hv~l~v~--d~~~~~~FY~~~lG~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~----~   87 (291)
                      .++.+|+||++.|+  ++++++.||+++|||+.......     +........+..++....+.+.........+    +
T Consensus         2 ~~f~~IDHia~avp~~~l~~av~fY~~vfGf~~~~~~~~~di~~~~~~l~s~~~~s~~~~v~l~lne~~~~~~~s~i~~F   81 (199)
T d1t47a2           2 RTFQAIDHCVGNVELGRMNEWVGFYNKVMGFTNMKEFVGDDIATEYSALMSKVVADGTLKVKFPINEPALAKKKSQIDEY   81 (199)
T ss_dssp             CSCCEEEEEEEECCTTCHHHHHHHHHHHHCCEECSCCBCHHHHTTTTSEEEEEEECTTSCSEEEEEEECCSSSCCHHHHH
T ss_pred             CcceeeCceEeccChhhHHHHHHHHHHHhCCeEeeEecccccccceeEEEEeeccccccccceeecccCccccccchhhh
Confidence            35789999999999  99999999999999998764322     2223333334433333333333322222111    1


Q ss_pred             ---cCCCCceEEEEEeCCHHHHHHHHHHcCCeeecCCee
Q 022818           88 ---DIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGP  123 (291)
Q Consensus        88 ---~~g~~~~~i~~~v~d~~~~~~~l~~~G~~~~~~~~~  123 (291)
                         ..|+|++||||.|+|+.++.++|+++|+++...|..
T Consensus        82 L~~~~g~GiQHIAl~tdDI~~av~~L~~~G~~fL~~p~~  120 (199)
T d1t47a2          82 LEFYGGAGVQHIALNTGDIVETVRTMRAAGVQFLDTPDS  120 (199)
T ss_dssp             HHHHTSCEEEEEEEECSCHHHHHHHHHHTTCCBCCCCGG
T ss_pred             hhhcCCCcceEEEEEcCCHHHHHHHHHHcCCCCCCCChH
Confidence               256799999999999999999999999998877643

>d1u6la_ d.32.1.7 (A:) Hypothetical protein PA1353 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: 3-demethylubiquinone-9 3-methyltransferase
domain: Hypothetical protein PA1353
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.17  E-value=3e-10  Score=82.32  Aligned_cols=116  Identities=16%  Similarity=0.089  Sum_probs=71.9

Q ss_pred             eeeC-ChhhhHHHHHHhcCCeeeeeeccCCccce------------EEEeccccCCceeEEEEeeecCcceeecCcceeE
Q 022818          159 LRVG-DLGRSIKFYEKALGMKLLRTVDKPEYKYT------------LAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQ  225 (291)
Q Consensus       159 l~v~-d~~~~~~fy~~~lG~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~h  225 (291)
                      |... |.++|++||+++||+++.......+....            ...+..+    +..+......+..+ ....+..+
T Consensus         8 l~f~g~a~eAl~FY~~~fG~e~~~~~~~~~~~~~~~~~~~~~~~i~ha~l~i~----g~~~~~~d~~~~~~-~~~~~~~~   82 (137)
T d1u6la_           8 LIFNGNCREAFSCYHQHLGGTLEAMLPFGDSPECGDIPADWKDKIMHARLVVG----SFALMASDNHPAYP-YEGIKGCS   82 (137)
T ss_dssp             EEESSCHHHHHHHHHHHHCSEEEEEEESTTTTC----CCSSCCCEEEEEEEET----TEEEEEEECCTTSC-CCCCCSEE
T ss_pred             EEECCCHHHHHHHHHHHCCCEEEEEEEcccCCccccCCCCCCCeEEEEEEEEc----CeEEEecccCCccc-ccCCCcEE
Confidence            4454 99999999999999998766543332111            1111111    11221111111111 12234577


Q ss_pred             EEEEecchHHhHHHHHHHHHHhCCeeecCCccCCCCCceEEEEECCCCceEEEeech
Q 022818          226 VAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNE  282 (291)
Q Consensus       226 i~~~v~di~~~~~~l~~~~~~~G~~~~~~~~~~~~~~~~~~~~~DpdG~~iel~~~~  282 (291)
                      +++.+++.+. .+++.++ .++|++++.+|...|+ |.++++|+||+|+.|+|...+
T Consensus        83 ~~l~~~~~d~-~~~~~~~-l~~G~~v~~p~~~~~w-G~~~g~v~Dp~G~~W~i~~~~  136 (137)
T d1u6la_          83 ISLNVDSKAE-AERLFNA-LAEGGSVQMPLGPTFW-AASFGMFTDRFGVAWMVNCEQ  136 (137)
T ss_dssp             EEEECSSHHH-HHHHHHH-HHTTSEEEEEEEEETT-EEEEEEEECTTSCEEEEEESC
T ss_pred             EEEEcCCHHH-HHHHHhh-cccCceeecCccccCC-CcEEEEEECCCCCEEEEEecC
Confidence            8888887333 2333233 6789999999999998 468999999999999997643

>d1sp8a2 d.32.1.3 (A:208-431) 4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Zea mays) [TaxId: 4577]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Corn (Zea mays) [TaxId: 4577]

Probab=99.17  E-value=2.4e-10  Score=89.19  Aligned_cols=98  Identities=19%  Similarity=0.291  Sum_probs=66.9

Q ss_pred             CcceeeEEEEEEeCCHHHHHHHHHhhcCCEEEEEeecCC-----CceeEEEEecCCCCcceEE-EeeecCCCCc----c-
Q 022818           19 KDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPE-----EKYSNAFLGFGPEQSHFVV-ELTYNYGVTS----Y-   87 (291)
Q Consensus        19 ~~~~~i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~l-~~~~~~~~~~----~-   87 (291)
                      ..+++|+||++.|+|+++++.||+++|||+...+....+     .......+..++....+.+ ++..+....+    + 
T Consensus         5 ~Gl~~IDHI~i~V~dld~a~~fY~~vLGf~~~~~~~~~~i~~~~~~l~s~v~~~~~g~v~~~l~E~~~~~~~~s~i~~FL   84 (224)
T d1sp8a2           5 YGLSRFDHIVGNVPELAPAAAYFAGFTGFHEFAEFTTEDVGTAESGLNSMVLANNSENVLLPLNEPVHGTKRRSQIQTFL   84 (224)
T ss_dssp             CSEEEEEEEEEECSCHHHHHHHHHHHHCCEEEEEEEC--------CEEEEEEECSSSCCEEEEEEECCCSSSCCHHHHHH
T ss_pred             CCcCeeeeeEEeccCHHHHHHHHHHHhCCEEEEEeccccccccceeEEEEEEEcCCCccceeeeeecCCCCCccHHHHHH
Confidence            458999999999999999999999999999876543221     2334444444443333322 2212211111    1 


Q ss_pred             --cCCCCceEEEEEeCCHHHHHHHHHHcCCe
Q 022818           88 --DIGTGFGHFAIATEDVYKLVENIRAKGGN  116 (291)
Q Consensus        88 --~~g~~~~~i~~~v~d~~~~~~~l~~~G~~  116 (291)
                        ..|.|++||||.|+|+.++.++|+++|+.
T Consensus        85 ~~~~g~GiqHIAf~vdDI~~av~~L~arGv~  115 (224)
T d1sp8a2          85 DHHGGPGVQHMALASDDVLRTLREMQARSAM  115 (224)
T ss_dssp             HHHTSSEEEEEEEEETTHHHHHHHHHTSGGG
T ss_pred             HhccCCCceeEEEEeCCHHHHHHHHHhcccc
Confidence              24679999999999999999999998743

>d1u6la_ d.32.1.7 (A:) Hypothetical protein PA1353 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: 3-demethylubiquinone-9 3-methyltransferase
domain: Hypothetical protein PA1353
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.11  E-value=3.2e-09  Score=76.68  Aligned_cols=112  Identities=17%  Similarity=0.136  Sum_probs=74.4

Q ss_pred             EeC-CHHHHHHHHHhhcCCEEEEEeecCCC------------ceeEEEEecCCCCcceEEEeeecCCCCcccCCCCceEE
Q 022818           30 RVG-DLDRTIKFYTECFGMKLLRKRDVPEE------------KYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHF   96 (291)
Q Consensus        30 ~v~-d~~~~~~FY~~~lG~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~~~~i   96 (291)
                      ..+ |.++|++||+++||+++.......+.            ...++.+.+++.  .  +........... ...+..++
T Consensus         9 ~f~g~a~eAl~FY~~~fG~e~~~~~~~~~~~~~~~~~~~~~~~i~ha~l~i~g~--~--~~~~d~~~~~~~-~~~~~~~~   83 (137)
T d1u6la_           9 IFNGNCREAFSCYHQHLGGTLEAMLPFGDSPECGDIPADWKDKIMHARLVVGSF--A--LMASDNHPAYPY-EGIKGCSI   83 (137)
T ss_dssp             EESSCHHHHHHHHHHHHCSEEEEEEESTTTTC----CCSSCCCEEEEEEEETTE--E--EEEEECCTTSCC-CCCCSEEE
T ss_pred             EECCCHHHHHHHHHHHCCCEEEEEEEcccCCccccCCCCCCCeEEEEEEEEcCe--E--EEecccCCcccc-cCCCcEEE
Confidence            335 99999999999999999876543321            222333444321  1  111111111111 22345678


Q ss_pred             EEEeCCHH--HHHHHHHHcCCeeecCCeecCCCceEEEEEECCCCCEEEEEeC
Q 022818           97 AIATEDVY--KLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQR  147 (291)
Q Consensus        97 ~~~v~d~~--~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~Dp~G~~iel~~~  147 (291)
                      ++.+++.+  +.+.++.++|++++.+|.+.+||.+. .+|+||+|+.|.|...
T Consensus        84 ~l~~~~~d~~~~~~~~l~~G~~v~~p~~~~~wG~~~-g~v~Dp~G~~W~i~~~  135 (137)
T d1u6la_          84 SLNVDSKAEAERLFNALAEGGSVQMPLGPTFWAASF-GMFTDRFGVAWMVNCE  135 (137)
T ss_dssp             EEECSSHHHHHHHHHHHHTTSEEEEEEEEETTEEEE-EEEECTTSCEEEEEES
T ss_pred             EEEcCCHHHHHHHHhhcccCceeecCccccCCCcEE-EEEECCCCCEEEEEec
Confidence            88887654  55777788999999999999998864 8999999999998754

>d1sqda2 d.32.1.3 (A:181-410) 4-hydroxyphenylpyruvate dioxygenase, HppD {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=98.96  E-value=1.8e-09  Score=84.33  Aligned_cols=99  Identities=13%  Similarity=0.204  Sum_probs=66.0

Q ss_pred             CCceEEEeeeCChhhhHHHHHHhcCCeeeeeeccCC-----ccceEEEeccccCCceeEEEEeeecCc---ce-------
Q 022818          152 EPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPE-----YKYTLAMLGYAEEDQTTVLELTYNYGV---TE-------  216 (291)
Q Consensus       152 ~~~~~v~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~l~l~~~~~~---~~-------  216 (291)
                      .+|+||++.|+|++++.+||+++||+.........+     .......+..+.+  ...+.+.....+   ..       
T Consensus        21 ~~IDHI~iaVpdld~a~~~y~~~lG~~~~~~~~~~di~~~~~~l~s~v~~s~~g--~v~~~l~E~~~~~~~~sqi~~FL~   98 (230)
T d1sqda2          21 RRLDHAVGNVPELGPALTYVAGFTGFHQFAEFTADDVGTAESGLNSAVLASNDE--MVLLPINEPVHGTKRKSQIQTYLE   98 (230)
T ss_dssp             EEEEEEEEECSCHHHHHHHHHHHHCCEEEEEEC--------CCEEEEEEECTTS--CSEEEEEEECCC---CCHHHHHHH
T ss_pred             CccCcceecccCHHHHHHHHHHHcCCeeeEEecccccccceeeEeeccccCCCc--ccceeEEeecCCCCCcchHHHHHh
Confidence            469999999999999999999999998776553222     1122222332222  344444432211   11       


Q ss_pred             eecCcceeEEEEEecchHHhHHHHHHHHHHhCCeee
Q 022818          217 YTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKIT  252 (291)
Q Consensus       217 ~~~~~~~~hi~~~v~di~~~~~~l~~~~~~~G~~~~  252 (291)
                      ...|+|++||||.|+||.+++++|+++...+|++++
T Consensus        99 ~~~G~GiQHIAf~tdDI~aav~~LrarG~~~G~~f~  134 (230)
T d1sqda2          99 HNEGAGLQHLALMSEDIFRTLREMRKRSSIGGFDFM  134 (230)
T ss_dssp             HHTSCEEEEEEEEESCHHHHHHHHHHHGGGTSCCBC
T ss_pred             hccCCceeEEEEEeCCHHHHHHHHHHhhcccCcccc
Confidence            235789999999999999999999555555677765

>d1sqda2 d.32.1.3 (A:181-410) 4-hydroxyphenylpyruvate dioxygenase, HppD {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=98.96  E-value=5.6e-09  Score=81.55  Aligned_cols=96  Identities=19%  Similarity=0.318  Sum_probs=65.2

Q ss_pred             CcceeeEEEEEEeCCHHHHHHHHHhhcCCEEEEEeecCC-----CceeEEEEecCCCCcceEEEeeecC---C-CC---c
Q 022818           19 KDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPE-----EKYSNAFLGFGPEQSHFVVELTYNY---G-VT---S   86 (291)
Q Consensus        19 ~~~~~i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~l~~~~~~---~-~~---~   86 (291)
                      ..+.+|+||++.|+|++++.+||+++||+.........+     .......+..++....  +.+....   . .+   .
T Consensus        18 ~gl~~IDHI~iaVpdld~a~~~y~~~lG~~~~~~~~~~di~~~~~~l~s~v~~s~~g~v~--~~l~E~~~~~~~~sqi~~   95 (230)
T d1sqda2          18 YGIRRLDHAVGNVPELGPALTYVAGFTGFHQFAEFTADDVGTAESGLNSAVLASNDEMVL--LPINEPVHGTKRKSQIQT   95 (230)
T ss_dssp             SSEEEEEEEEEECSCHHHHHHHHHHHHCCEEEEEEC--------CCEEEEEEECTTSCSE--EEEEEECCC---CCHHHH
T ss_pred             CCcCccCcceecccCHHHHHHHHHHHcCCeeeEEecccccccceeeEeeccccCCCcccc--eeEEeecCCCCCcchHHH
Confidence            458999999999999999999999999999887654222     1222233333333332  3333221   1 11   1


Q ss_pred             ---ccCCCCceEEEEEeCCHHHHHHHHHHcCCe
Q 022818           87 ---YDIGTGFGHFAIATEDVYKLVENIRAKGGN  116 (291)
Q Consensus        87 ---~~~g~~~~~i~~~v~d~~~~~~~l~~~G~~  116 (291)
                         ...|.|++||||.|+|+.++.++|+++|..
T Consensus        96 FL~~~~G~GiQHIAf~tdDI~aav~~LrarG~~  128 (230)
T d1sqda2          96 YLEHNEGAGLQHLALMSEDIFRTLREMRKRSSI  128 (230)
T ss_dssp             HHHHHTSCEEEEEEEEESCHHHHHHHHHHHGGG
T ss_pred             HHhhccCCceeEEEEEeCCHHHHHHHHHHhhcc
Confidence               125889999999999999999999998643

>d1u7ia_ d.32.1.7 (A:) Hypothetical protein PA1358 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: 3-demethylubiquinone-9 3-methyltransferase
domain: Hypothetical protein PA1358
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=98.84  E-value=7.7e-08  Score=68.83  Aligned_cols=113  Identities=12%  Similarity=0.042  Sum_probs=67.6

Q ss_pred             eeeCChhhhHHHHHHhcCCeeeeeec-------cCCccceEEEeccccCCceeEEEEeeecCcceeecCcceeEEEEEec
Q 022818          159 LRVGDLGRSIKFYEKALGMKLLRTVD-------KPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTD  231 (291)
Q Consensus       159 l~v~d~~~~~~fy~~~lG~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~hi~~~v~  231 (291)
                      +.-.+.+++++||+++||...+....       .+++...-..+..+    +..+-+....+......+ +..++++.++
T Consensus        12 f~g~~a~eAi~FY~~~Fg~~~v~~~~~~~~~~~~~~g~v~ha~l~i~----~~~i~~~d~~~~~~~~~~-~~~s~~l~~~   86 (134)
T d1u7ia_          12 FQGVQAEAAMNFYLSLFDDAEILQIQRYGAEGPGPEGSVLKALFRLG----DQSVHCIDSHVRHAFDFT-PAFSFFVDCE   86 (134)
T ss_dssp             EESSCHHHHHHHHHHHCSSEEEEEEEECCTTCSSCTTSEEEEEEEET----TEEEEEEEESSCCSCCCC-TTEEEEEECC
T ss_pred             ECCcCHHHHHHHHHHhCCCeEEEEEEEcCCCCCCCCCCEEEEEEEEC----CEEEEEecCCCCCCCCCC-CceEEEEEec
Confidence            33358999999999999987554331       11222222223321    222322222221111222 3356788877


Q ss_pred             chHHhHHHHHHHHHHhCCeeecCCccCCCCCceEEEEECCCCceEEEe
Q 022818          232 DVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLV  279 (291)
Q Consensus       232 di~~~~~~l~~~~~~~G~~~~~~~~~~~~~~~~~~~~~DpdG~~iel~  279 (291)
                      +.+ ..+++.++ .++|.++..++.+.++ +.++..++||.|+.|.|.
T Consensus        87 ~~d-~~~~~~~~-l~~gg~v~~p~~~~~~-g~~~g~v~D~fGv~W~i~  131 (134)
T d1u7ia_          87 SNA-QIERLAEA-LSDGGKALMPLGDYGF-SQRFAWLADRFGVSWQLN  131 (134)
T ss_dssp             CHH-HHHHHHHH-HHTTSEEEEEEECCSS-SSEEEEEECTTSCEEEEE
T ss_pred             cHH-HHHHHHHH-HhcCCEEecCcccccc-cceEEEEECCCCCEEEEE
Confidence            733 33333333 5778999999999888 469999999999999985

>d1u7ia_ d.32.1.7 (A:) Hypothetical protein PA1358 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: 3-demethylubiquinone-9 3-methyltransferase
domain: Hypothetical protein PA1358
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=98.81  E-value=3.2e-07  Score=65.51  Aligned_cols=115  Identities=15%  Similarity=0.188  Sum_probs=74.0

Q ss_pred             EEEEEeCCHHHHHHHHHhhcCCEEEEEee-------cCCCceeEEEEecCCCCcceEEEeeecCCCCcccCCCCceEEEE
Q 022818           26 HAVYRVGDLDRTIKFYTECFGMKLLRKRD-------VPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAI   98 (291)
Q Consensus        26 hv~l~v~d~~~~~~FY~~~lG~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~~~~i~~   98 (291)
                      ++.+.-.+.++|++||+++||.+.+.+..       .+.+...+..|.+++.  .+++  ...........+ ....+++
T Consensus         9 yL~f~g~~a~eAi~FY~~~Fg~~~v~~~~~~~~~~~~~~g~v~ha~l~i~~~--~i~~--~d~~~~~~~~~~-~~~s~~l   83 (134)
T d1u7ia_           9 FLMFQGVQAEAAMNFYLSLFDDAEILQIQRYGAEGPGPEGSVLKALFRLGDQ--SVHC--IDSHVRHAFDFT-PAFSFFV   83 (134)
T ss_dssp             EEEEESSCHHHHHHHHHHHCSSEEEEEEEECCTTCSSCTTSEEEEEEEETTE--EEEE--EEESSCCSCCCC-TTEEEEE
T ss_pred             EEEECCcCHHHHHHHHHHhCCCeEEEEEEEcCCCCCCCCCCEEEEEEEECCE--EEEE--ecCCCCCCCCCC-CceEEEE
Confidence            44444568999999999999987654431       1234455566666532  2222  222111112222 3456778


Q ss_pred             EeCCHHHH--HHHHHHcCCeeecCCeecCCCceEEEEEECCCCCEEEEEe
Q 022818           99 ATEDVYKL--VENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQ  146 (291)
Q Consensus        99 ~v~d~~~~--~~~l~~~G~~~~~~~~~~~~g~~~~~~~~Dp~G~~iel~~  146 (291)
                      .+++.++.  +.+..+.|.++..++.+.+||.+. ..++||.|+.|.|.-
T Consensus        84 ~~~~~d~~~~~~~~l~~gg~v~~p~~~~~~g~~~-g~v~D~fGv~W~i~~  132 (134)
T d1u7ia_          84 DCESNAQIERLAEALSDGGKALMPLGDYGFSQRF-AWLADRFGVSWQLNL  132 (134)
T ss_dssp             ECCCHHHHHHHHHHHHTTSEEEEEEECCSSSSEE-EEEECTTSCEEEEEE
T ss_pred             EeccHHHHHHHHHHHhcCCEEecCcccccccceE-EEEECCCCCEEEEEc
Confidence            87764433  455567788999999999998875 889999999998864

>d1tsja_ d.32.1.7 (A:) Hypothetical protein MW1090 {Staphylococcus aureus [TaxId: 1280]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: 3-demethylubiquinone-9 3-methyltransferase
domain: Hypothetical protein MW1090
species: Staphylococcus aureus [TaxId: 1280]

Probab=98.47  E-value=1.3e-06  Score=61.69  Aligned_cols=112  Identities=12%  Similarity=0.030  Sum_probs=65.7

Q ss_pred             EeeeC-ChhhhHHHHHHhcCCeeeeee-cc------CCccceEEEeccccCCceeEEEEeeecCcceeecCcceeEEEEE
Q 022818          158 MLRVG-DLGRSIKFYEKALGMKLLRTV-DK------PEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAIS  229 (291)
Q Consensus       158 ~l~v~-d~~~~~~fy~~~lG~~~~~~~-~~------~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~hi~~~  229 (291)
                      -|.+. |.+++++||+++||-..+... ..      +++...-..+..+    +..+-+....+.    .+ ...++.+.
T Consensus         9 yl~f~g~a~eAi~FY~~vFg~~~v~~~~~~~~~~~~~~g~i~ha~l~i~----g~~~~~~d~~~~----~~-~~~s~~v~   79 (129)
T d1tsja_           9 FLMFNNQAEEAVKLYTSLFEDSEIITMAKYGENGPGDPGTVQHSIFTLN----GQVFMAIDANSG----TE-LPISLFVT   79 (129)
T ss_dssp             EEECSSCHHHHHHHHHHHSSSCEEEEEEECC-----CTTSEEEEEEEET----TEEEEEEC------------CCCEEEE
T ss_pred             EEEECCCHHHHHHHHHHHcCCcEEEEEEecCCCCCCCCCcEEEEEEEEC----CEEEEeecCCCC----CC-CCEEEEec
Confidence            45664 999999999999976544332 11      1222222223321    222322211111    11 12357778


Q ss_pred             ecchHHhHHHHHHHHHHhCCeeecCCccCCCCCceEEEEECCCCceEEEeec
Q 022818          230 TDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDN  281 (291)
Q Consensus       230 v~di~~~~~~l~~~~~~~G~~~~~~~~~~~~~~~~~~~~~DpdG~~iel~~~  281 (291)
                      +++.+ ..+++..+| ++|.++..++...++ +.++..++||.|+.|.|..+
T Consensus        80 ~~~~~-e~~~~~~~L-~~gg~v~~p~~~~~~-g~~~g~v~D~fGv~W~i~~p  128 (129)
T d1tsja_          80 VKDTI-EMERLFNGL-KDEGAILMPKTNMPP-YREFAWVQDKFGVSFQLALP  128 (129)
T ss_dssp             CSSHH-HHHHHHHHH-HTTCEEEEEEEEETT-EEEEEEEECTTSCEEEEEEC
T ss_pred             cCCHH-HHHHHHHHh-ccCCEEecccccccc-cceEEEEECCCCCEEEEeCC
Confidence            88743 344443343 567799999999888 56899999999999999754

>d1tsja_ d.32.1.7 (A:) Hypothetical protein MW1090 {Staphylococcus aureus [TaxId: 1280]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: 3-demethylubiquinone-9 3-methyltransferase
domain: Hypothetical protein MW1090
species: Staphylococcus aureus [TaxId: 1280]

Probab=98.32  E-value=1.5e-05  Score=56.13  Aligned_cols=109  Identities=14%  Similarity=0.153  Sum_probs=68.1

Q ss_pred             EEEEeC-CHHHHHHHHHhhcCCEEEEEe-------ecCCCceeEEEEecCCCCcceEEEeeecCCCCcccCCCCceEEEE
Q 022818           27 AVYRVG-DLDRTIKFYTECFGMKLLRKR-------DVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAI   98 (291)
Q Consensus        27 v~l~v~-d~~~~~~FY~~~lG~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~~~~i~~   98 (291)
                      --|..+ |.++|++||+++||-..+.+.       ...++...++.|.+++.  .+++  .......    + ...++++
T Consensus         8 Pyl~f~g~a~eAi~FY~~vFg~~~v~~~~~~~~~~~~~~g~i~ha~l~i~g~--~~~~--~d~~~~~----~-~~~s~~v   78 (129)
T d1tsja_           8 TFLMFNNQAEEAVKLYTSLFEDSEIITMAKYGENGPGDPGTVQHSIFTLNGQ--VFMA--IDANSGT----E-LPISLFV   78 (129)
T ss_dssp             EEEECSSCHHHHHHHHHHHSSSCEEEEEEECC-----CTTSEEEEEEEETTE--EEEE--EC------------CCCEEE
T ss_pred             EEEEECCCHHHHHHHHHHHcCCcEEEEEEecCCCCCCCCCcEEEEEEEECCE--EEEe--ecCCCCC----C-CCEEEEe
Confidence            445566 999999999999976443332       12234555666766532  2222  1111111    1 1234677


Q ss_pred             EeCCHHH---HHHHHHHcCCeeecCCeecCCCceEEEEEECCCCCEEEEEe
Q 022818           99 ATEDVYK---LVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQ  146 (291)
Q Consensus        99 ~v~d~~~---~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~Dp~G~~iel~~  146 (291)
                      .+++.++   ++++| +.|.++..++...++|.. +..++||.|+.|.|..
T Consensus        79 ~~~~~~e~~~~~~~L-~~gg~v~~p~~~~~~g~~-~g~v~D~fGv~W~i~~  127 (129)
T d1tsja_          79 TVKDTIEMERLFNGL-KDEGAILMPKTNMPPYRE-FAWVQDKFGVSFQLAL  127 (129)
T ss_dssp             ECSSHHHHHHHHHHH-HTTCEEEEEEEEETTEEE-EEEEECTTSCEEEEEE
T ss_pred             ccCCHHHHHHHHHHh-ccCCEEecccccccccce-EEEEECCCCCEEEEeC
Confidence            8877665   44555 466688888888898776 4889999999998865

>d1u69a_ d.32.1.7 (A:) Hypothetical protein PA2721 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: 3-demethylubiquinone-9 3-methyltransferase
domain: Hypothetical protein PA2721
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=96.90  E-value=0.02  Score=40.74  Aligned_cols=102  Identities=13%  Similarity=0.022  Sum_probs=57.2

Q ss_pred             eCChhhhHHHHHHhcCCeeeeee-ccC-------CccceEEEeccccCCceeEEEEeeecCcceeecCcceeEEEEEecc
Q 022818          161 VGDLGRSIKFYEKALGMKLLRTV-DKP-------EYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDD  232 (291)
Q Consensus       161 v~d~~~~~~fy~~~lG~~~~~~~-~~~-------~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~hi~~~v~d  232 (291)
                      -.+.++|.+||.++||-..+... ..+       .+......+..+    +..+-... .+ .....+++ .++.+.++|
T Consensus        10 ~Gna~EAl~FY~~vFg~~~i~~~~~~~~~~p~~~~~~Vmha~l~i~----g~~lm~sD-~~-~~~~~~~~-~sl~l~~d~   82 (156)
T d1u69a_          10 DSAALEAATFYAETFPDSAVLAVHRAPGDYPSGKEGDVLTVEFRVM----GIPCLGLN-GG-PAFRHSEA-FSFQVATDD   82 (156)
T ss_dssp             SSCHHHHHHHHHHHSTTEEEEEEEECSSCBTTBCTTSEEEEEEEET----TEEEEEEE-CC-TTCCCCTT-EEEEEEESS
T ss_pred             CCcHHHHHHHHHHHcCCCEEeEEEecCCCCCCCCCCcEEEEEEEEC----CeEEEeec-CC-CCCCCCCC-eEEEEecCC
Confidence            38899999999999964333222 111       112222222221    12222211 11 12223333 679999998


Q ss_pred             hHHhHHHHHHHHHHhCCeeecCCccCCCCCceEEEEECCCCceEEEeec
Q 022818          233 VYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDN  281 (291)
Q Consensus       233 i~~~~~~l~~~~~~~G~~~~~~~~~~~~~~~~~~~~~DpdG~~iel~~~  281 (291)
                       .+.++++.++|.+.| .+.     .|+     .+++|+.|+.|.|+-+
T Consensus        83 -~eE~d~~f~~LsegG-~~~-----~~~-----G~v~DkFGV~Wqi~~~  119 (156)
T d1u69a_          83 -QAETDRLWNAIVDNG-GEE-----SAC-----GWCRDKWGISWQITPR  119 (156)
T ss_dssp             -HHHHHHHHHHHHHTT-CEE-----CST-----TEEECTTSCEEEEEEH
T ss_pred             -HHHHHHHHHHHhccC-CCC-----CCC-----eEEECCCCCEEEeChH
Confidence             455666666667665 322     223     3599999999999966

>d1u69a_ d.32.1.7 (A:) Hypothetical protein PA2721 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: 3-demethylubiquinone-9 3-methyltransferase
domain: Hypothetical protein PA2721
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=96.79  E-value=0.045  Score=38.80  Aligned_cols=134  Identities=16%  Similarity=0.183  Sum_probs=78.4

Q ss_pred             eeEEEEEEeCCHHHHHHHHHhhcCCEEEEE-eec-------CCCceeEEEEecCCCCcceEEEeeecCCCCcccCCCCce
Q 022818           23 RFLHAVYRVGDLDRTIKFYTECFGMKLLRK-RDV-------PEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFG   94 (291)
Q Consensus        23 ~i~hv~l~v~d~~~~~~FY~~~lG~~~~~~-~~~-------~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~~~   94 (291)
                      +|.-.-+.-.+.++|.+||+++||-..+.. ...       +.+...++.+.+++  ..++.  ... . ..+..+ .-.
T Consensus         2 ~~t~~L~F~Gna~EAl~FY~~vFg~~~i~~~~~~~~~~p~~~~~~Vmha~l~i~g--~~lm~--sD~-~-~~~~~~-~~~   74 (156)
T d1u69a_           2 KNTICLWYDSAALEAATFYAETFPDSAVLAVHRAPGDYPSGKEGDVLTVEFRVMG--IPCLG--LNG-G-PAFRHS-EAF   74 (156)
T ss_dssp             CEEEEEEESSCHHHHHHHHHHHSTTEEEEEEEECSSCBTTBCTTSEEEEEEEETT--EEEEE--EEC-C-TTCCCC-TTE
T ss_pred             CCcEeeeECCcHHHHHHHHHHHcCCCEEeEEEecCCCCCCCCCCcEEEEEEEECC--eEEEe--ecC-C-CCCCCC-CCe
Confidence            344455566799999999999996543332 211       22345566666653  22222  111 1 122233 335


Q ss_pred             EEEEEeCC---HHHHHHHHHHcCCeeecCCeecCCCceEEEEEECCCCCEEEEEeCCCCCCCceEEEeeeCChhhhHHHH
Q 022818           95 HFAIATED---VYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRGPTPEPLCQVMLRVGDLGRSIKFY  171 (291)
Q Consensus        95 ~i~~~v~d---~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~Dp~G~~iel~~~~~~~~~~~~v~l~v~d~~~~~~fy  171 (291)
                      ++++.++|   +++++++|.+.|- +     ..+.|     .++|+-|..|.++...     + .--+...|.+++.+=+
T Consensus        75 sl~l~~d~~eE~d~~f~~LsegG~-~-----~~~~G-----~v~DkFGV~Wqi~~~~-----~-~~~~~~~~~~~~~~~~  137 (156)
T d1u69a_          75 SFQVATDDQAETDRLWNAIVDNGG-E-----ESACG-----WCRDKWGISWQITPRV-----L-SEAIASPDRAAARRAF  137 (156)
T ss_dssp             EEEEEESSHHHHHHHHHHHHHTTC-E-----ECSTT-----EEECTTSCEEEEEEHH-----H-HHHHTCSSHHHHHHHH
T ss_pred             EEEEecCCHHHHHHHHHHHhccCC-C-----CCCCe-----EEECCCCCEEEeChHH-----H-HHHhcCCCHHHHHHHH
Confidence            78888876   5667888887762 2     22333     3899999999988652     0 0012335667777777


Q ss_pred             HHhcCCeee
Q 022818          172 EKALGMKLL  180 (291)
Q Consensus       172 ~~~lG~~~~  180 (291)
                      +..|.+...
T Consensus       138 ~a~~~m~k~  146 (156)
T d1u69a_         138 EAMMTMGRI  146 (156)
T ss_dssp             HHHTTCSSC
T ss_pred             HHHHcCcCe
Confidence            777776643