Citrus Sinensis ID: 022831

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-
Protein Sequence
MAEASPAVANAELLEWPKKDKRRLLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHLAIATEDVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFELIQRGPTPEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNEDFLKELQSE
Secondary Structure (PSIPRED)
cccccccccccccEEcccccccEEEEEEEEEcccHHHHHHHHHccccEEEEEEEcccccEEEEEEcccccccccEEEEEEcccccccccccccEEEEEEEcHHHHHHHHHHHcccEEEcccccccccccEEEEEEcccccEEEEEEccccccccccEEEEEccHHHHHHHHHHHcccEEEEEEccccccEEEEEEEccccccccEEEEEEEccccccccccccEEEEEEEccHHHHHHHHHHHHHHcccEEEccccccccccEEEEEEEcccccEEEEEcccccHHHcccc
Secondary Structure Prediction (SSPRO)
ccccccccccHHHcccccccccEEEEEEEEEccHHHHHHHHHHHHccEEEEEccccccccEEEEEccccccccEEEEEEEcccccccccccccEEEEEEcccHHHHHHHHHHccccEEEcccccccccEEEEEEEcccccEEEEEEcccccccccEEEEEEccHHHHHHHHHHHHccEEEEEcccccccEEEEEEEcccccccEEEEEEEcccccEccccccEEEEEEEcccHHHHHHHHHHHHHHccccEEEcccccccccEEEEEEEcccccEEEEEccHHHHHHcccc
Coil and Loop (DISEMBL)
maeaspavANAELlewpkkdkrRLLHAVYRVGDLDRTIKYYTECFGmellrkrdvpeekysnaflgfgpeqSYFVVELTYNygvtsydigtgfghlaIATEDVYKMVENIRakggnvtrepgplkgmtthfafvkdpdgyIFELiqrgptpeplCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYgvteytkgnAYAQVAISTDDVYKSAEVVNLVTQELggkitrqpgpipglntkitsfvdpdgwktvLVDNEDFLKELQSE
Flexible Loop (DISEMBL)
maeaspavanaellewpkkdkrrllhavyrvgdldrtiKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHLAIATEDVYKMVENIRAKggnvtrepgplkGMTTHFAFVKDPDGYIFELIQRGPTPEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAISTDDVYKSAEVVNLVTQelggkitrqpgpipglNTKITSFVDPDGWKTVLVDNEDFLKELQSE
Low Complexity Region (SEG)
MAEASPAVANAELLEWPKKDKRRLLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHLAIATEDVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFELIQRGPTPEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNEDFLKELQSE
Disordered region (IsUnstruct)
************LLEWPKKDKRRLLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHLAIATEDVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFELIQRGPTPEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNEDF*******
Disordered Region (DISOPRED)
******A***AELLEWPKKDKRRLLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHLAIATEDVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFELIQRGPTPEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNED*L******
Disordered Region (DISEMBL)
********ANAELLEWPKKDKRRLLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHLAIATEDVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFELIQRGPTPEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNEDFLKELQSE
Disordered Region (DISPRO)
*************LEWPKKDKRRLLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHLAIATEDVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFELIQRGPTPEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNEDFLKEL***
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MAEASPAVANAELLEWPKKDKRRLLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHLAIATEDVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFELIQRGPTPEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNEDFLKELQSE
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	291	2.2.26 [Sep-21-2011]
Q39366	282	Putative lactoylglutathio	N/A	no	0.958	0.989	0.792	1e-131
Q948T6	291	Lactoylglutathione lyase	yes	no	0.975	0.975	0.778	1e-130
Q8W593	350	Probable lactoylglutathio	no	no	0.975	0.811	0.690	1e-119
P46235	138	Probable lactoylglutathio	yes	no	0.415	0.876	0.592	5e-40
Q9KT93	138	Probable lactoylglutathio	no	no	0.422	0.891	0.566	2e-38
P0A1Q2	135	Lactoylglutathione lyase	yes	no	0.412	0.888	0.564	4e-36
P0A1Q3	135	Lactoylglutathione lyase	N/A	no	0.412	0.888	0.564	4e-36
P0AC83	135	Lactoylglutathione lyase	yes	no	0.412	0.888	0.564	7e-36
P0AC81	135	Lactoylglutathione lyase	N/A	no	0.412	0.888	0.564	7e-36
P0AC82	135	Lactoylglutathione lyase	N/A	no	0.412	0.888	0.564	7e-36

>sp|Q39366|LGUL_BRAOG Putative lactoylglutathione lyase OS=Brassica oleracea var. gemmifera PE=2 SV=1

 Score =  468 bits (1205), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 222/280 (79%), Positives = 249/280 (88%), Gaps = 1/280 (0%)

Query: 10  NAELLEWPKKDKRRLLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGP 69
           NA+L+EWPKKDKRR LH VYRVGDLDRTI++YTECFGM++LRKRDVPEEKYSNAFLGFGP
Sbjct: 4   NADLVEWPKKDKRRFLHVVYRVGDLDRTIQFYTECFGMKVLRKRDVPEEKYSNAFLGFGP 63

Query: 70  EQSYFVVELTYNYGVTSYDIGTGFGHLAIATEDVYKMVENIRAKGGNVTREPGPLKGMTT 129
           E S FVVELTYNYGV+SYDIGTGFGH AI+T+DV KMVE +RAKGGNVTREPGP+KG  +
Sbjct: 64  ETSNFVVELTYNYGVSSYDIGTGFGHFAISTQDVSKMVEAVRAKGGNVTREPGPVKGGGS 123

Query: 130 HFAFVKDPDGYIFELIQRGPTPEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELK 189
             AFVKDPDGY FELIQRGPTPEPLCQVMLRVGDL R++KF EKALGM+LLR I+ PE  
Sbjct: 124 VIAFVKDPDGYTFELIQRGPTPEPLCQVMLRVGDLDRAVKFMEKALGMRLLRRIERPEYN 183

Query: 190 CALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGG 249
             + M+GYAEE ++ VLEL Y+YGVTEYTKGNAYAQ+AI TDDVYKSAEVV +V QELGG
Sbjct: 184 T-IGMMGYAEEYESIVLELTYNYGVTEYTKGNAYAQIAIGTDDVYKSAEVVKIVNQELGG 242

Query: 250 KITRQPGPIPGLNTKITSFVDPDGWKTVLVDNEDFLKELQ 289
           KITR+ GP+PGL TKI SF+DPDGWK VLVDNEDFLKEL+
Sbjct: 243 KITREAGPLPGLGTKIVSFLDPDGWKQVLVDNEDFLKELE 282

Catalyzes the conversion of hemimercaptal, formed from methylglyoxal and glutathione, to S-lactoylglutathione.
Brassica oleracea var. gemmifera (taxid: 178616)
EC: 4EC: .EC: 4EC: .EC: 1EC: .EC: 5

>sp|Q948T6|LGUL_ORYSJ Lactoylglutathione lyase OS=Oryza sativa subsp. japonica GN=GLX-I PE=1 SV=2

 Score =  462 bits (1190), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 225/289 (77%), Positives = 249/289 (86%), Gaps = 5/289 (1%)

Query: 2   AEASPAVANAELLEWPKKDKRRLLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYS 61
           AE SP V    +LEWPKKDK+RLLHAVYRVGDLDRTIK YTECFGM+LLRKRDVPEEKY+
Sbjct: 7   AEKSPEV----VLEWPKKDKKRLLHAVYRVGDLDRTIKCYTECFGMKLLRKRDVPEEKYT 62

Query: 62  NAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHLAIATEDVYKMVENIRAKGG-NVTRE 120
           NAFLGFGPE + F +ELTYNYGV  YDIG GFGH AIATEDVYK+ E I++     +TRE
Sbjct: 63  NAFLGFGPEDTNFALELTYNYGVDKYDIGAGFGHFAIATEDVYKLAEKIKSSCCCKITRE 122

Query: 121 PGPLKGMTTHFAFVKDPDGYIFELIQRGPTPEPLCQVMLRVGDLGRSIKFYEKALGMKLL 180
           PGP+KG +T  AF +DPDGY+FELIQRGPTPEPLCQVMLRVGDL RSIKFYEKALGMKLL
Sbjct: 123 PGPVKGGSTVIAFAQDPDGYMFELIQRGPTPEPLCQVMLRVGDLDRSIKFYEKALGMKLL 182

Query: 181 RTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAISTDDVYKSAEVV 240
           R  D P+ K  +AMLGYA+ED+TTV+EL Y+YGVTEYTKGNAYAQVAI T+DVYKSAE V
Sbjct: 183 RKKDVPDYKYTIAMLGYADEDKTTVIELTYNYGVTEYTKGNAYAQVAIGTEDVYKSAEAV 242

Query: 241 NLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNEDFLKELQ 289
            LVT+ELGGKI RQPGP+PGLNTKI SF+DPDGWK VLVDN DFLKELQ
Sbjct: 243 ELVTKELGGKILRQPGPLPGLNTKIASFLDPDGWKVVLVDNADFLKELQ 291

Catalyzes the conversion of hemimercaptal, formed from methylglyoxal and glutathione, to S-lactoylglutathione.

Oryza sativa subsp. japonica (taxid: 39947)

EC: 4

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 5

>sp|Q8W593|LGUC_ARATH Probable lactoylglutathione lyase, chloroplast OS=Arabidopsis thaliana GN=At1g67280 PE=2 SV=1

 Score =  426 bits (1096), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 199/288 (69%), Positives = 238/288 (82%), Gaps = 4/288 (1%)

Query: 2   AEASPAVANAELLEWPKKDKRRLLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYS 61
            +A+ A    +LL W K DKRR+LH VYRVGD+DRTIK+YTEC GM+LLRKRD+PEEKY+
Sbjct: 67  GKAAQATTQDDLLTWVKNDKRRMLHVVYRVGDMDRTIKFYTECLGMKLLRKRDIPEEKYT 126

Query: 62  NAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHLAIATEDVYKMVENIRAKGGNVTREP 121
           NAFLG+GPE S+FV+ELTYNYGV  YDIG GFGH  IA +DV K VE ++AKGG V+REP
Sbjct: 127 NAFLGYGPEDSHFVIELTYNYGVDKYDIGAGFGHFGIAVDDVAKTVELVKAKGGKVSREP 186

Query: 122 GPLKGMTTHFAFVKDPDGYIFELIQRGPTPEPLCQVMLRVGDLGRSIKFYEKALGMKLLR 181
           GP+KG  T  AF++DPDGY FEL++RGPTPEPLCQVMLRVGDL R+IKFYEKA GM+LLR
Sbjct: 187 GPVKGGKTVIAFIEDPDGYKFELLERGPTPEPLCQVMLRVGDLDRAIKFYEKAFGMELLR 246

Query: 182 TIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAISTDDVYKSAEVVN 241
           T D+PE K  +AM+GY  ED+  VLEL Y+YGVTEY KGNAYAQ+AI TDDVYK+AE + 
Sbjct: 247 TRDNPEYKYTIAMMGYGPEDKFPVLELTYNYGVTEYDKGNAYAQIAIGTDDVYKTAEAIK 306

Query: 242 LVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNEDFLKELQ 289
           L     GGKITR+PGP+PG++TKIT+ +DPDGWK+V VDN DFLKEL+
Sbjct: 307 L----FGGKITREPGPLPGISTKITACLDPDGWKSVFVDNIDFLKELE 350

Catalyzes the conversion of hemimercaptal, formed from methylglyoxal and glutathione, to S-lactoylglutathione.

Arabidopsis thaliana (taxid: 3702)

EC: 4

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 5

>sp|P46235|LGUL_VIBPA Probable lactoylglutathione lyase OS=Vibrio parahaemolyticus serotype O3:K6 (strain RIMD 2210633) GN=gloA PE=3 SV=2

 Score =  164 bits (416), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 74/125 (59%), Positives = 95/125 (76%)

Query: 23  RLLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNY 82
           R+LH + RVGDLD++IK+YTE  GM+LLR  +  E +Y+ AF+G+G E    V+ELTYN+
Sbjct: 5   RILHTMLRVGDLDKSIKFYTEVMGMQLLRTNENKEYEYTLAFVGYGDESQGAVIELTYNW 64

Query: 83  GVTSYDIGTGFGHLAIATEDVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIF 142
           G T YD+GT FGH+AI  +D+Y   + I+A GGNVTRE GP+KG TTH AFVKDPDGY+ 
Sbjct: 65  GKTEYDLGTAFGHIAIGVDDIYATCDAIKAAGGNVTREAGPVKGGTTHIAFVKDPDGYMI 124

Query: 143 ELIQR 147
           ELIQ 
Sbjct: 125 ELIQN 129

Catalyzes the conversion of hemimercaptal, formed from methylglyoxal and glutathione, to S-lactoylglutathione.

Vibrio parahaemolyticus (taxid: 670)

EC: 4

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 5

>sp|Q9KT93|LGUL_VIBCH Probable lactoylglutathione lyase OS=Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961) GN=gloA PE=3 SV=2

 Score =  159 bits (403), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 72/127 (56%), Positives = 93/127 (73%)

Query: 21  KRRLLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTY 80
             R+LH + RVGDLD++I++YT+  GM LLRK +  E KY+ AFLG+G E    V+ELTY
Sbjct: 3   NHRILHTMLRVGDLDKSIEFYTQVMGMSLLRKNENTEYKYTLAFLGYGDESQGAVIELTY 62

Query: 81  NYGVTSYDIGTGFGHLAIATEDVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGY 140
           N+GV  Y+ G  +GH+AI  +D+Y   + I+A GG VTREPGP+KG TTH AFVKDPDGY
Sbjct: 63  NWGVADYEKGNAYGHIAIGVDDIYATCDTIKAAGGIVTREPGPVKGGTTHIAFVKDPDGY 122

Query: 141 IFELIQR 147
           + ELIQ 
Sbjct: 123 MIELIQN 129

Catalyzes the conversion of hemimercaptal, formed from methylglyoxal and glutathione, to S-lactoylglutathione.

Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961) (taxid: 243277)

EC: 4

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 5

>sp|P0A1Q2|LGUL_SALTY Lactoylglutathione lyase OS=Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) GN=gloA PE=3 SV=1

 Score =  152 bits (383), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 70/124 (56%), Positives = 91/124 (73%)

Query: 23  RLLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNY 82
           RLLH + RVGDL R+I +YT   GM+LLR  + PE KYS AF+G+GPE    V+ELTYN+
Sbjct: 2   RLLHTMLRVGDLQRSIAFYTNVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNW 61

Query: 83  GVTSYDIGTGFGHLAIATEDVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIF 142
           GV SYD+G  +GH+A++ ++  +  E IR  GGNVTRE GP+KG +T  AFV+DPDGY  
Sbjct: 62  GVESYDMGNAYGHIALSVDNAAEACERIRQNGGNVTREAGPVKGGSTIIAFVEDPDGYKI 121

Query: 143 ELIQ 146
           ELI+
Sbjct: 122 ELIE 125

Catalyzes the conversion of hemimercaptal, formed from methylglyoxal and glutathione, to S-lactoylglutathione.

Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) (taxid: 99287)

EC: 4

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 5

>sp|P0A1Q3|LGUL_SALTI Lactoylglutathione lyase OS=Salmonella typhi GN=gloA PE=3 SV=1

 Score =  152 bits (383), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 70/124 (56%), Positives = 91/124 (73%)

Query: 23  RLLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNY 82
           RLLH + RVGDL R+I +YT   GM+LLR  + PE KYS AF+G+GPE    V+ELTYN+
Sbjct: 2   RLLHTMLRVGDLQRSIAFYTNVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNW 61

Query: 83  GVTSYDIGTGFGHLAIATEDVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIF 142
           GV SYD+G  +GH+A++ ++  +  E IR  GGNVTRE GP+KG +T  AFV+DPDGY  
Sbjct: 62  GVESYDMGNAYGHIALSVDNAAEACERIRQNGGNVTREAGPVKGGSTIIAFVEDPDGYKI 121

Query: 143 ELIQ 146
           ELI+
Sbjct: 122 ELIE 125

Catalyzes the conversion of hemimercaptal, formed from methylglyoxal and glutathione, to S-lactoylglutathione.

Salmonella typhi (taxid: 90370)

EC: 4

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 5

>sp|P0AC83|LGUL_SHIFL Lactoylglutathione lyase OS=Shigella flexneri GN=gloA PE=3 SV=1

 Score =  151 bits (381), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 70/124 (56%), Positives = 92/124 (74%)

Query: 23  RLLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNY 82
           RLLH + RVGDL R+I +YT+  GM+LLR  + PE KYS AF+G+GPE    V+ELTYN+
Sbjct: 2   RLLHTMLRVGDLQRSIDFYTKVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNW 61

Query: 83  GVTSYDIGTGFGHLAIATEDVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIF 142
           GV  Y++GT +GH+A++ ++  +  E IR  GGNVTRE GP+KG TT  AFV+DPDGY  
Sbjct: 62  GVDKYELGTAYGHIALSVDNAAEACEKIRQNGGNVTREAGPVKGGTTVIAFVEDPDGYKI 121

Query: 143 ELIQ 146
           ELI+
Sbjct: 122 ELIE 125

Catalyzes the conversion of hemimercaptal, formed from methylglyoxal and glutathione, to S-lactoylglutathione.

Shigella flexneri (taxid: 623)

EC: 4

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 5

>sp|P0AC81|LGUL_ECOLI Lactoylglutathione lyase OS=Escherichia coli (strain K12) GN=gloA PE=1 SV=1

 Score =  151 bits (381), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 70/124 (56%), Positives = 92/124 (74%)

Query: 23  RLLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNY 82
           RLLH + RVGDL R+I +YT+  GM+LLR  + PE KYS AF+G+GPE    V+ELTYN+
Sbjct: 2   RLLHTMLRVGDLQRSIDFYTKVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNW 61

Query: 83  GVTSYDIGTGFGHLAIATEDVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIF 142
           GV  Y++GT +GH+A++ ++  +  E IR  GGNVTRE GP+KG TT  AFV+DPDGY  
Sbjct: 62  GVDKYELGTAYGHIALSVDNAAEACEKIRQNGGNVTREAGPVKGGTTVIAFVEDPDGYKI 121

Query: 143 ELIQ 146
           ELI+
Sbjct: 122 ELIE 125

Catalyzes the conversion of hemimercaptal, formed from methylglyoxal and glutathione, to S-lactoylglutathione.

Escherichia coli (strain K12) (taxid: 83333)

EC: 4

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 5

>sp|P0AC82|LGUL_ECO57 Lactoylglutathione lyase OS=Escherichia coli O157:H7 GN=gloA PE=3 SV=1

 Score =  151 bits (381), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 70/124 (56%), Positives = 92/124 (74%)

Query: 23  RLLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNY 82
           RLLH + RVGDL R+I +YT+  GM+LLR  + PE KYS AF+G+GPE    V+ELTYN+
Sbjct: 2   RLLHTMLRVGDLQRSIDFYTKVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNW 61

Query: 83  GVTSYDIGTGFGHLAIATEDVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIF 142
           GV  Y++GT +GH+A++ ++  +  E IR  GGNVTRE GP+KG TT  AFV+DPDGY  
Sbjct: 62  GVDKYELGTAYGHIALSVDNAAEACEKIRQNGGNVTREAGPVKGGTTVIAFVEDPDGYKI 121

Query: 143 ELIQ 146
           ELI+
Sbjct: 122 ELIE 125

Catalyzes the conversion of hemimercaptal, formed from methylglyoxal and glutathione, to S-lactoylglutathione.

Escherichia coli O157:H7 (taxid: 83334)

EC: 4

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 5

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	291
2213425	291	hypothetical protein [Citrus x paradisi]	0.962	0.962	0.939	1e-153
359483362	292	PREDICTED: lactoylglutathione lyase [Vit	1.0	0.996	0.835	1e-142
211906514	289	lactoylglutathione lyase [Gossypium hirs	0.993	1.0	0.833	1e-142
224078584	294	predicted protein [Populus trichocarpa]	0.993	0.982	0.851	1e-141
356531939	296	PREDICTED: putative lactoylglutathione l	0.986	0.969	0.826	1e-140
356555674	287	PREDICTED: putative lactoylglutathione l	0.986	1.0	0.833	1e-140
449433964	292	PREDICTED: putative lactoylglutathione l	1.0	0.996	0.811	1e-138
388520197	284	unknown [Lotus japonicus]	0.962	0.985	0.828	1e-136
255554865	280	lactoylglutathione lyase, putative [Rici	0.938	0.975	0.857	1e-136
312281931	289	unnamed protein product [Thellungiella h	0.993	1.0	0.795	1e-134

>gi|2213425|emb|CAB09799.1| hypothetical protein [Citrus x paradisi]

 Score =  545 bits (1405), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 263/280 (93%), Positives = 270/280 (96%)

Query: 12  ELLEWPKKDKRRLLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQ 71
           ELLEWPKKDKRR LHAVYRVGDLDRTIK+YTECFGM+LLRKRDVPEEKYSNAFLGFGPEQ
Sbjct: 12  ELLEWPKKDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQ 71

Query: 72  SYFVVELTYNYGVTSYDIGTGFGHLAIATEDVYKMVENIRAKGGNVTREPGPLKGMTTHF 131
           S+FVVELTYNYGVTSYDIGTGFGH AIATEDVYK+VENIRAKGGNVTREPGPLKG TTH 
Sbjct: 72  SHFVVELTYNYGVTSYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHI 131

Query: 132 AFVKDPDGYIFELIQRGPTPEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCA 191
           AFVKDPDGYIFELIQRGPTPEPLCQVMLRVGDLGRSIKFYEKALGMKLLRT+D PE K  
Sbjct: 132 AFVKDPDGYIFELIQRGPTPEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYT 191

Query: 192 LAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKI 251
           LAMLGYAEEDQTTVLEL Y+YGVTEYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKI
Sbjct: 192 LAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKI 251

Query: 252 TRQPGPIPGLNTKITSFVDPDGWKTVLVDNEDFLKELQSE 291
           TRQPG IPGLNTKITSFVDPDGWKTVLVDNEDFLKE+QSE
Sbjct: 252 TRQPGSIPGLNTKITSFVDPDGWKTVLVDNEDFLKEIQSE 291

Source: Citrus x paradisi

Species: Citrus x paradisi

Genus: Citrus

Family: Rutaceae

Order: Sapindales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359483362|ref|XP_002273346.2| PREDICTED: lactoylglutathione lyase [Vitis vinifera] gi|302144130|emb|CBI23235.3| unnamed protein product [Vitis vinifera]

 Score =  511 bits (1317), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 243/291 (83%), Positives = 266/291 (91%)

Query: 1   MAEASPAVANAELLEWPKKDKRRLLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKY 60
           MAEA+P V + ELLEWPKKDKRR LH VYRVGDLDRTIK+YTECFGM+LLRKRD+PEEKY
Sbjct: 1   MAEAAPVVPSDELLEWPKKDKRRFLHVVYRVGDLDRTIKFYTECFGMKLLRKRDIPEEKY 60

Query: 61  SNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHLAIATEDVYKMVENIRAKGGNVTRE 120
           +NAFLGFGPE++ FVVELTYNYGV  YDIGTGFGH AIAT+DVYKMVE+IRAKGG +TRE
Sbjct: 61  TNAFLGFGPEETNFVVELTYNYGVDKYDIGTGFGHFAIATQDVYKMVEDIRAKGGIITRE 120

Query: 121 PGPLKGMTTHFAFVKDPDGYIFELIQRGPTPEPLCQVMLRVGDLGRSIKFYEKALGMKLL 180
           PGP+KG  +  AF KDPDGYIFELIQRGPTPEPLCQVMLRVGDL RSIKFYEKALGMK++
Sbjct: 121 PGPVKGGKSVIAFAKDPDGYIFELIQRGPTPEPLCQVMLRVGDLERSIKFYEKALGMKMV 180

Query: 181 RTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAISTDDVYKSAEVV 240
           +  D PE K ++AM+GYAEE +TTVLEL Y+YGVTEYTKGNAYAQVAISTDDVYKSAEVV
Sbjct: 181 KKTDRPEYKYSIAMMGYAEEHETTVLELTYNYGVTEYTKGNAYAQVAISTDDVYKSAEVV 240

Query: 241 NLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNEDFLKELQSE 291
           NLVT+ELGGKITRQPGPIPGLNTKITSF+DPDGWKTVLVDNEDFLKEL  E
Sbjct: 241 NLVTKELGGKITRQPGPIPGLNTKITSFLDPDGWKTVLVDNEDFLKELHKE 291

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|211906514|gb|ACJ11750.1| lactoylglutathione lyase [Gossypium hirsutum]

 Score =  509 bits (1312), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 241/289 (83%), Positives = 266/289 (92%)

Query: 1   MAEASPAVANAELLEWPKKDKRRLLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKY 60
           MAE S AV + ELLEWPKKDKRR LHAVYRVGDLDRTIK+YTECFGM+LLRKRD+PEEKY
Sbjct: 1   MAEGSAAVPSTELLEWPKKDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDIPEEKY 60

Query: 61  SNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHLAIATEDVYKMVENIRAKGGNVTRE 120
           SNAFLGFGPE+S+FVVELTYNYGVTSYDIGTGFGH AIAT DVYKMVE+IRAKGGN+TRE
Sbjct: 61  SNAFLGFGPEESHFVVELTYNYGVTSYDIGTGFGHFAIATPDVYKMVEDIRAKGGNITRE 120

Query: 121 PGPLKGMTTHFAFVKDPDGYIFELIQRGPTPEPLCQVMLRVGDLGRSIKFYEKALGMKLL 180
           PGP+KG ++  AFVKDPDGYIFELIQR  TPEPLCQVMLRVGDL RS+KFYEKALGMKL+
Sbjct: 121 PGPVKGGSSVIAFVKDPDGYIFELIQRASTPEPLCQVMLRVGDLDRSVKFYEKALGMKLV 180

Query: 181 RTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAISTDDVYKSAEVV 240
           + +D PE K ++AM+GYAEE +TTVLEL Y+YGVTEYTKGNAYAQVAISTDDVYKS EVV
Sbjct: 181 KKVDRPEYKYSIAMMGYAEEHETTVLELTYNYGVTEYTKGNAYAQVAISTDDVYKSGEVV 240

Query: 241 NLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNEDFLKELQ 289
             V QELGGK+TR+PGPIPG+NTKITSF+DPDGWKTVLVDNEDFLKEL+
Sbjct: 241 EHVIQELGGKVTRKPGPIPGINTKITSFLDPDGWKTVLVDNEDFLKELK 289

Source: Gossypium hirsutum

Species: Gossypium hirsutum

Genus: Gossypium

Family: Malvaceae

Order: Malvales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224078584|ref|XP_002305564.1| predicted protein [Populus trichocarpa] gi|222848528|gb|EEE86075.1| predicted protein [Populus trichocarpa]

 Score =  508 bits (1308), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 247/290 (85%), Positives = 265/290 (91%), Gaps = 1/290 (0%)

Query: 3   EASPAVA-NAELLEWPKKDKRRLLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYS 61
           EA+ AV  NAELLEWPKKDKRRLLHAVYRVGDLDRTIK+YTE FGM+LLR RD+PEEKYS
Sbjct: 4   EAAKAVTPNAELLEWPKKDKRRLLHAVYRVGDLDRTIKFYTEGFGMKLLRHRDIPEEKYS 63

Query: 62  NAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHLAIATEDVYKMVENIRAKGGNVTREP 121
           NAFLGFGPE+S FVVELTYNYGVTSYDIG GFGH AIATEDVYK+VE +RA GGN+TREP
Sbjct: 64  NAFLGFGPEESNFVVELTYNYGVTSYDIGEGFGHFAIATEDVYKLVEKLRALGGNITREP 123

Query: 122 GPLKGMTTHFAFVKDPDGYIFELIQRGPTPEPLCQVMLRVGDLGRSIKFYEKALGMKLLR 181
           GP+KG  +  AFVKDPDGY FELIQRGPTPEPLCQ+MLRVGDL RSIKFYEKALGMKLLR
Sbjct: 124 GPVKGGASVIAFVKDPDGYAFELIQRGPTPEPLCQLMLRVGDLDRSIKFYEKALGMKLLR 183

Query: 182 TIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAISTDDVYKSAEVVN 241
            ID PE K  LAM+GYA+E +TTVLEL Y+YGVTEYTKGNAYAQVAISTDDVYKSAEVVN
Sbjct: 184 KIDRPEYKYTLAMMGYADEYETTVLELTYNYGVTEYTKGNAYAQVAISTDDVYKSAEVVN 243

Query: 242 LVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNEDFLKELQSE 291
           LVTQELGGKITRQPGPIPG+NTKITSF+DPDGWK+VLVDNEDFLKEL  E
Sbjct: 244 LVTQELGGKITRQPGPIPGINTKITSFLDPDGWKSVLVDNEDFLKELHKE 293

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356531939|ref|XP_003534533.1| PREDICTED: putative lactoylglutathione lyase-like [Glycine max]

 Score =  503 bits (1295), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 239/289 (82%), Positives = 264/289 (91%), Gaps = 2/289 (0%)

Query: 1   MAEASPAVANAELLEWPKKDKRRLLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKY 60
           MAEA+ +  NAELLEWPKKDKRR LH VYRVGDLDRTIK+YTECFGM+LLRKRD+PEEKY
Sbjct: 10  MAEATQS--NAELLEWPKKDKRRFLHVVYRVGDLDRTIKFYTECFGMKLLRKRDIPEEKY 67

Query: 61  SNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHLAIATEDVYKMVENIRAKGGNVTRE 120
           +NAFLGFGPEQS+FVVELTYNYGVTSYDIGTGFGH AIAT DVYK+VE+IRAKGGN+TRE
Sbjct: 68  ANAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIATPDVYKLVEDIRAKGGNITRE 127

Query: 121 PGPLKGMTTHFAFVKDPDGYIFELIQRGPTPEPLCQVMLRVGDLGRSIKFYEKALGMKLL 180
           PGP+KG  +  AFVKDPDGY FELIQR  TPEPLCQVMLRVGDL RSIKFYEK LG++++
Sbjct: 128 PGPVKGGKSVIAFVKDPDGYAFELIQRSSTPEPLCQVMLRVGDLERSIKFYEKTLGLRVV 187

Query: 181 RTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAISTDDVYKSAEVV 240
           +  D PE K  +AMLGYAEE +TTVLEL Y+YGVTEYTKGNAYAQVAI TDDVYKSAEVV
Sbjct: 188 KKTDRPEYKYTIAMLGYAEEHETTVLELTYNYGVTEYTKGNAYAQVAIGTDDVYKSAEVV 247

Query: 241 NLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNEDFLKELQ 289
           N+VTQELGGKITRQPGP+PGLNTKITSF+DPDGWKTVLVDN+DFLKEL+
Sbjct: 248 NIVTQELGGKITRQPGPVPGLNTKITSFLDPDGWKTVLVDNQDFLKELE 296

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356555674|ref|XP_003546155.1| PREDICTED: putative lactoylglutathione lyase-like [Glycine max]

 Score =  502 bits (1293), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 241/289 (83%), Positives = 265/289 (91%), Gaps = 2/289 (0%)

Query: 1   MAEASPAVANAELLEWPKKDKRRLLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKY 60
           MAEA+ +  NAELLEWPKKDKRR LH VYRVGDLDRTIK+YTECFGM+LLRKRD+PEEKY
Sbjct: 1   MAEATQS--NAELLEWPKKDKRRFLHVVYRVGDLDRTIKFYTECFGMKLLRKRDIPEEKY 58

Query: 61  SNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHLAIATEDVYKMVENIRAKGGNVTRE 120
           +NAFLGFGPEQS+FVVELTYNYGVTSYDIGTGFGH AIAT DVYK+VE+IRAKGGNVTRE
Sbjct: 59  ANAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIATPDVYKLVEDIRAKGGNVTRE 118

Query: 121 PGPLKGMTTHFAFVKDPDGYIFELIQRGPTPEPLCQVMLRVGDLGRSIKFYEKALGMKLL 180
           PGP+KG  +  AFVKDPDGY FELIQR  TPEPLCQVMLRVGDL RSIKFYEKALG++++
Sbjct: 119 PGPVKGGKSVIAFVKDPDGYAFELIQRPSTPEPLCQVMLRVGDLERSIKFYEKALGLRVV 178

Query: 181 RTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAISTDDVYKSAEVV 240
           +  D PE K  +AMLGYAEE +TTVLEL Y+YGVTEYTKGNAYAQVAI TDDVYKSAEVV
Sbjct: 179 KKTDRPEYKYTIAMLGYAEEHETTVLELTYNYGVTEYTKGNAYAQVAIGTDDVYKSAEVV 238

Query: 241 NLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNEDFLKELQ 289
           N+VTQELGGKITRQPGPIPGLNTKIT+F+DPDGWKTVLVDN+DFLKEL+
Sbjct: 239 NIVTQELGGKITRQPGPIPGLNTKITAFLDPDGWKTVLVDNQDFLKELE 287

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449433964|ref|XP_004134766.1| PREDICTED: putative lactoylglutathione lyase-like [Cucumis sativus] gi|449479479|ref|XP_004155610.1| PREDICTED: putative lactoylglutathione lyase-like [Cucumis sativus]

 Score =  496 bits (1276), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 237/292 (81%), Positives = 264/292 (90%), Gaps = 1/292 (0%)

Query: 1   MAEASPAVA-NAELLEWPKKDKRRLLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEK 59
           MAEA+ ++A NAELLEWPKKDKRR LH VYRVGDLDRTIK+YTECFGM+LLRKRDVPEEK
Sbjct: 1   MAEAAASLAPNAELLEWPKKDKRRFLHVVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEK 60

Query: 60  YSNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHLAIATEDVYKMVENIRAKGGNVTR 119
           YSNAFLGFGPE S FVVELTYNYGV+SYDIG+GFGH AIAT+DVYK+VE+IRAKGG +TR
Sbjct: 61  YSNAFLGFGPEDSNFVVELTYNYGVSSYDIGSGFGHFAIATQDVYKLVEDIRAKGGIITR 120

Query: 120 EPGPLKGMTTHFAFVKDPDGYIFELIQRGPTPEPLCQVMLRVGDLGRSIKFYEKALGMKL 179
           EPGP+KG ++  AF KDPDGYIFELIQRGPTPEPLCQVMLRVGDL RSIKFY+KALGM+L
Sbjct: 121 EPGPVKGGSSVIAFAKDPDGYIFELIQRGPTPEPLCQVMLRVGDLERSIKFYDKALGMRL 180

Query: 180 LRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAISTDDVYKSAEV 239
           L+ +D PE K  LAM+GYA+E +TTVLEL Y+YGVTEYTKGNAYAQVAI TDDVYKSAEV
Sbjct: 181 LKKVDRPEYKYTLAMMGYADEPETTVLELTYNYGVTEYTKGNAYAQVAIGTDDVYKSAEV 240

Query: 240 VNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNEDFLKELQSE 291
           VN V QELGGKITRQPGP+PG+ TKI SF+DPDGWKTVLVDN DF KEL ++
Sbjct: 241 VNQVNQELGGKITRQPGPLPGIGTKIVSFLDPDGWKTVLVDNADFQKELDNQ 292

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388520197|gb|AFK48160.1| unknown [Lotus japonicus]

 Score =  491 bits (1265), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 232/280 (82%), Positives = 255/280 (91%)

Query: 10  NAELLEWPKKDKRRLLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGP 69
           NAELL+W KKDKRR LHAVYRVGDLDRTIK+YTECFGM+LLRKRD+PEEKY+NAFLGFG 
Sbjct: 5   NAELLDWSKKDKRRFLHAVYRVGDLDRTIKFYTECFGMQLLRKRDIPEEKYANAFLGFGS 64

Query: 70  EQSYFVVELTYNYGVTSYDIGTGFGHLAIATEDVYKMVENIRAKGGNVTREPGPLKGMTT 129
           EQS+FVVELTYNYGVTSYDIGTGFGH AIAT DVYK VE++RAKGGNVTREPGP+KG +T
Sbjct: 65  EQSHFVVELTYNYGVTSYDIGTGFGHFAIATPDVYKFVEDVRAKGGNVTREPGPVKGGST 124

Query: 130 HFAFVKDPDGYIFELIQRGPTPEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELK 189
             AFVKDPDGY+FE+IQR  TPEPLCQVMLRVGDL RSIKFYEKALG+K+++  D PE K
Sbjct: 125 VIAFVKDPDGYLFEIIQRASTPEPLCQVMLRVGDLERSIKFYEKALGLKVVKKTDRPEQK 184

Query: 190 CALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGG 249
             +AMLGYAEE +T VLEL Y+YGVTEYTKGNAYAQVAI TDDVYKSAE+VNL TQE GG
Sbjct: 185 YTIAMLGYAEEHETIVLELTYNYGVTEYTKGNAYAQVAIGTDDVYKSAELVNLATQEFGG 244

Query: 250 KITRQPGPIPGLNTKITSFVDPDGWKTVLVDNEDFLKELQ 289
           KITRQPGPIPGLNTKI SF+DPDGWKTVLVDN+DFLKEL+
Sbjct: 245 KITRQPGPIPGLNTKIASFLDPDGWKTVLVDNQDFLKELE 284

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255554865|ref|XP_002518470.1| lactoylglutathione lyase, putative [Ricinus communis] gi|223542315|gb|EEF43857.1| lactoylglutathione lyase, putative [Ricinus communis]

 Score =  489 bits (1259), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 234/273 (85%), Positives = 252/273 (92%)

Query: 4   ASPAVANAELLEWPKKDKRRLLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNA 63
           A     NA++LEWPKKDKRRLLHAVYRVGDLDRTIK+YTECFGM+LLRKRD+PEEKYSNA
Sbjct: 3   AEATAPNADVLEWPKKDKRRLLHAVYRVGDLDRTIKFYTECFGMKLLRKRDIPEEKYSNA 62

Query: 64  FLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHLAIATEDVYKMVENIRAKGGNVTREPGP 123
           FLGFGPE++ FVVELTYNYGVTSYDIGTGFGH AIAT+DVYK+VE + AKGG VTREPGP
Sbjct: 63  FLGFGPEETNFVVELTYNYGVTSYDIGTGFGHFAIATQDVYKLVEEVLAKGGAVTREPGP 122

Query: 124 LKGMTTHFAFVKDPDGYIFELIQRGPTPEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTI 183
           +KG TT  AFVKDPDGYIFELIQRGPTPEPLCQVMLRVGDL RSI+FYEKALGMKLLR +
Sbjct: 123 VKGGTTVIAFVKDPDGYIFELIQRGPTPEPLCQVMLRVGDLDRSIRFYEKALGMKLLRKV 182

Query: 184 DSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAISTDDVYKSAEVVNLV 243
           D PE K  LAM+GYA+E +TTVLEL Y+YGVTEYTKGNAYAQVAISTDDVYKSAEVVNLV
Sbjct: 183 DKPEYKYTLAMMGYADEYETTVLELTYNYGVTEYTKGNAYAQVAISTDDVYKSAEVVNLV 242

Query: 244 TQELGGKITRQPGPIPGLNTKITSFVDPDGWKT 276
           TQELGGKITRQPGPIPGLNTKITSF+DPDGWKT
Sbjct: 243 TQELGGKITRQPGPIPGLNTKITSFLDPDGWKT 275

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|312281931|dbj|BAJ33831.1| unnamed protein product [Thellungiella halophila]

 Score =  484 bits (1247), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 230/289 (79%), Positives = 254/289 (87%)

Query: 1   MAEASPAVANAELLEWPKKDKRRLLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKY 60
           MAEAS    NAELL+WPKKD RR LH VYRVGDLDRTI++YTECFGM+LLRKRDVPEEKY
Sbjct: 1   MAEASAVAPNAELLDWPKKDNRRFLHVVYRVGDLDRTIEFYTECFGMKLLRKRDVPEEKY 60

Query: 61  SNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHLAIATEDVYKMVENIRAKGGNVTRE 120
           SNAFLGFGPE S FVVELTYNYGV+SYDIGTGFGH AI+T+DV KMVE +RAKGGNVTRE
Sbjct: 61  SNAFLGFGPETSNFVVELTYNYGVSSYDIGTGFGHFAISTQDVSKMVETVRAKGGNVTRE 120

Query: 121 PGPLKGMTTHFAFVKDPDGYIFELIQRGPTPEPLCQVMLRVGDLGRSIKFYEKALGMKLL 180
           PGP+KG  +  AFVKDPDGY FELIQRGPTPEPLCQVMLR GDL R+IKFYEKALGM+LL
Sbjct: 121 PGPVKGGNSVIAFVKDPDGYAFELIQRGPTPEPLCQVMLRTGDLDRAIKFYEKALGMRLL 180

Query: 181 RTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAISTDDVYKSAEVV 240
           R I+ PE K  + M+GYAEE +T VLEL Y+YGVTEYTKGNAYAQ+AI TDDVYKS EVV
Sbjct: 181 RRIERPEYKYTIGMMGYAEEYETIVLELTYNYGVTEYTKGNAYAQIAIGTDDVYKSGEVV 240

Query: 241 NLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNEDFLKELQ 289
            +V QELGGKITR+ GP+PGL TKI SF+DPDGWKTVLVDN+DFLKEL+
Sbjct: 241 KIVNQELGGKITREAGPLPGLGTKIVSFLDPDGWKTVLVDNKDFLKELE 289

Source: Thellungiella halophila

Species: Eutrema halophilum

Genus: Eutrema

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

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Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	291
TAIR|locus:2019574	350	AT1G67280 [Arabidopsis thalian	0.972	0.808	0.693	2.9e-110
UNIPROTKB|Q9KT93	138	gloA "Probable lactoylglutathi	0.426	0.898	0.580	4.9e-37
TIGR_CMR|VC_1010	138	VC_1010 "lactoylglutathione ly	0.426	0.898	0.580	4.9e-37
UNIPROTKB|P0AC81	135	gloA "GloA" [Escherichia coli	0.426	0.918	0.564	6.5e-35
TIGR_CMR|SO_2044	136	SO_2044 "lactoylglutathione ly	0.426	0.911	0.56	4.6e-34
DICTYBASE|DDB_G0291265	136	gloA "glyoxylase I" [Dictyoste	0.426	0.911	0.516	3.3e-31
SGD|S000004463	326	GLO1 "Monomeric glyoxalase I"	0.628	0.561	0.297	3.9e-23
RGD|1307010	298	Glod4 "glyoxalase domain conta	0.845	0.825	0.294	1.6e-22
ASPGD|ASPL0000011175	318	AN4174 [Emericella nidulans (t	0.683	0.625	0.291	2.6e-21
ZFIN|ZDB-GENE-040912-38	298	glod4 "glyoxalase domain conta	0.845	0.825	0.290	1e-20

TAIR|locus:2019574 AT1G67280 [Arabidopsis thaliana (taxid:3702)]

 Score = 1089 (388.4 bits), Expect = 2.9e-110, P = 2.9e-110
 Identities = 199/287 (69%), Positives = 238/287 (82%)

Query:     3 EASPAVANAELLEWPKKDKRRLLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSN 62
             +A+ A    +LL W K DKRR+LH VYRVGD+DRTIK+YTEC GM+LLRKRD+PEEKY+N
Sbjct:    68 KAAQATTQDDLLTWVKNDKRRMLHVVYRVGDMDRTIKFYTECLGMKLLRKRDIPEEKYTN 127

Query:    63 AFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHLAIATEDVYKMVENIRAKGGNVTREPG 122
             AFLG+GPE S+FV+ELTYNYGV  YDIG GFGH  IA +DV K VE ++AKGG V+REPG
Sbjct:   128 AFLGYGPEDSHFVIELTYNYGVDKYDIGAGFGHFGIAVDDVAKTVELVKAKGGKVSREPG 187

Query:   123 PLKGMTTHFAFVKDPDGYIFELIQRGPTPEPLCQVMLRVGDLGRSIKFYEKALGMKLLRT 182
             P+KG  T  AF++DPDGY FEL++RGPTPEPLCQVMLRVGDL R+IKFYEKA GM+LLRT
Sbjct:   188 PVKGGKTVIAFIEDPDGYKFELLERGPTPEPLCQVMLRVGDLDRAIKFYEKAFGMELLRT 247

Query:   183 IDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAISTDDVYKSAEVVNL 242
              D+PE K  +AM+GY  ED+  VLEL Y+YGVTEY KGNAYAQ+AI TDDVYK+AE + L
Sbjct:   248 RDNPEYKYTIAMMGYGPEDKFPVLELTYNYGVTEYDKGNAYAQIAIGTDDVYKTAEAIKL 307

Query:   243 VTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNEDFLKELQ 289
                  GGKITR+PGP+PG++TKIT+ +DPDGWK+V VDN DFLKEL+
Sbjct:   308 ----FGGKITREPGPLPGISTKITACLDPDGWKSVFVDNIDFLKELE 350

GO:0004462 "lactoylglutathione lyase activity" evidence=IEA;ISS

GO:0005739 "mitochondrion" evidence=ISM

GO:0005975 "carbohydrate metabolic process" evidence=ISS

GO:0046872 "metal ion binding" evidence=IEA

GO:0031977 "thylakoid lumen" evidence=IDA

GO:0009570 "chloroplast stroma" evidence=IDA

GO:0009579 "thylakoid" evidence=IDA

GO:0009409 "response to cold" evidence=IEP

GO:0010319 "stromule" evidence=IDA

GO:0009507 "chloroplast" evidence=IDA

GO:0019243 "methylglyoxal catabolic process to D-lactate" evidence=RCA

UNIPROTKB|Q9KT93 gloA "Probable lactoylglutathione lyase" [Vibrio cholerae O1 biovar El Tor str. N16961 (taxid:243277)]

 Score = 398 (145.2 bits), Expect = 4.9e-37, P = 4.9e-37
 Identities = 72/124 (58%), Positives = 93/124 (75%)

Query:    23 RLLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNY 82
             R+LH + RVGDLD++I++YT+  GM LLRK +  E KY+ AFLG+G E    V+ELTYN+
Sbjct:     5 RILHTMLRVGDLDKSIEFYTQVMGMSLLRKNENTEYKYTLAFLGYGDESQGAVIELTYNW 64

Query:    83 GVTSYDIGTGFGHLAIATEDVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIF 142
             GV  Y+ G  +GH+AI  +D+Y   + I+A GG VTREPGP+KG TTH AFVKDPDGY+ 
Sbjct:    65 GVADYEKGNAYGHIAIGVDDIYATCDTIKAAGGIVTREPGPVKGGTTHIAFVKDPDGYMI 124

Query:   143 ELIQ 146
             ELIQ
Sbjct:   125 ELIQ 128

GO:0004462 "lactoylglutathione lyase activity" evidence=ISS

GO:0006749 "glutathione metabolic process" evidence=ISS

TIGR_CMR|VC_1010 VC_1010 "lactoylglutathione lyase" [Vibrio cholerae O1 biovar El Tor (taxid:686)]

 Score = 398 (145.2 bits), Expect = 4.9e-37, P = 4.9e-37
 Identities = 72/124 (58%), Positives = 93/124 (75%)

Query:    23 RLLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNY 82
             R+LH + RVGDLD++I++YT+  GM LLRK +  E KY+ AFLG+G E    V+ELTYN+
Sbjct:     5 RILHTMLRVGDLDKSIEFYTQVMGMSLLRKNENTEYKYTLAFLGYGDESQGAVIELTYNW 64

Query:    83 GVTSYDIGTGFGHLAIATEDVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIF 142
             GV  Y+ G  +GH+AI  +D+Y   + I+A GG VTREPGP+KG TTH AFVKDPDGY+ 
Sbjct:    65 GVADYEKGNAYGHIAIGVDDIYATCDTIKAAGGIVTREPGPVKGGTTHIAFVKDPDGYMI 124

Query:   143 ELIQ 146
             ELIQ
Sbjct:   125 ELIQ 128

GO:0004462 "lactoylglutathione lyase activity" evidence=ISS

GO:0006749 "glutathione metabolic process" evidence=ISS

UNIPROTKB|P0AC81 gloA "GloA" [Escherichia coli K-12 (taxid:83333)]

 Score = 378 (138.1 bits), Expect = 6.5e-35, P = 6.5e-35
 Identities = 70/124 (56%), Positives = 92/124 (74%)

Query:    23 RLLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNY 82
             RLLH + RVGDL R+I +YT+  GM+LLR  + PE KYS AF+G+GPE    V+ELTYN+
Sbjct:     2 RLLHTMLRVGDLQRSIDFYTKVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNW 61

Query:    83 GVTSYDIGTGFGHLAIATEDVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIF 142
             GV  Y++GT +GH+A++ ++  +  E IR  GGNVTRE GP+KG TT  AFV+DPDGY  
Sbjct:    62 GVDKYELGTAYGHIALSVDNAAEACEKIRQNGGNVTREAGPVKGGTTVIAFVEDPDGYKI 121

Query:   143 ELIQ 146
             ELI+
Sbjct:   122 ELIE 125

GO:0016151 "nickel cation binding" evidence=IDA

GO:0005515 "protein binding" evidence=IPI

GO:0004462 "lactoylglutathione lyase activity" evidence=IEA;IDA

GO:0019243 "methylglyoxal catabolic process to D-lactate" evidence=IMP

TIGR_CMR|SO_2044 SO_2044 "lactoylglutathione lyase" [Shewanella oneidensis MR-1 (taxid:211586)]

 Score = 370 (135.3 bits), Expect = 4.6e-34, P = 4.6e-34
 Identities = 70/125 (56%), Positives = 90/125 (72%)

Query:    23 RLLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQS-YFVVELTYN 81
             +LLH + RVG+L+R+I +YT+  GM+LLR  + PE KYS AF+G+G E +   V+ELTYN
Sbjct:     3 QLLHTMIRVGNLERSIAFYTQVLGMKLLRTSENPEYKYSLAFVGYGEESTGQAVIELTYN 62

Query:    82 YGVTSYDIGTGFGHLAIATEDVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYI 141
             +G   YD+GTGFGH+AI  +D+Y   E I A GG VTR PGP+ G TT  AFV+DPDGY 
Sbjct:    63 WGTEKYDLGTGFGHIAIGDDDIYARCEAIAAAGGKVTRAPGPVAGGTTEIAFVEDPDGYK 122

Query:   142 FELIQ 146
              E IQ
Sbjct:   123 IEFIQ 127

GO:0004462 "lactoylglutathione lyase activity" evidence=ISS

GO:0008152 "metabolic process" evidence=ISS

DICTYBASE|DDB_G0291265 gloA "glyoxylase I" [Dictyostelium discoideum (taxid:44689)]

 Score = 343 (125.8 bits), Expect = 3.3e-31, P = 3.3e-31
 Identities = 64/124 (51%), Positives = 88/124 (70%)

Query:    23 RLLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNY 82
             R+LH + RVG+L++++++Y +  GM+LLRK +  E KY+ AF+G+  E    V+ELTYN+
Sbjct:     3 RILHTMLRVGNLEKSLQFYIDVLGMKLLRKSENVEYKYTLAFVGYTNEDENAVIELTYNW 62

Query:    83 GVTSYDIGTGFGHLAIATEDVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIF 142
             GV  Y++GT FGH+AI  +DVY+ VE IR  GG V RE  P+ G TT  AFV+DPD Y  
Sbjct:    63 GVEKYELGTAFGHIAIGVDDVYETVERIRKSGGKVAREAAPVLGGTTVIAFVEDPDNYKI 122

Query:   143 ELIQ 146
             ELIQ
Sbjct:   123 ELIQ 126

GO:0046872 "metal ion binding" evidence=IEA

GO:0004462 "lactoylglutathione lyase activity" evidence=IEA;ISS

GO:0005575 "cellular_component" evidence=ND

GO:0006749 "glutathione metabolic process" evidence=ISS

GO:0016829 "lyase activity" evidence=IEA

SGD|S000004463 GLO1 "Monomeric glyoxalase I" [Saccharomyces cerevisiae (taxid:4932)]

 Score = 195 (73.7 bits), Expect = 3.9e-23, Sum P(2) = 3.9e-23
 Identities = 63/212 (29%), Positives = 92/212 (43%)

Query:    92 GFGHLAIATEDVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFELIQ----- 146
             GFGH+  +  D+ K  E + ++G    +     +G     AF   PDGY  ELI      
Sbjct:   114 GFGHICFSVSDINKTCEELESQGVKFKKRLS--EGRQKDIAFALGPDGYWIELITYSREG 171

Query:   147 ----RGPTPEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYA--EE 200
                 +G         M+R+ +  RS++FY+  LGMKLLRT +    K  L  LGY   + 
Sbjct:   172 QEYPKGSVGNKFNHTMIRIKNPTRSLEFYQNVLGMKLLRTSEHESAKFTLYFLGYGVPKT 231

Query:   201 DQT----TVLELAYSYGVTE-----YTKGNA----YAQVAISTDDVYKSAEVVNLVTQEL 247
             D      +VLEL +++G        Y  GN+    Y  + IS DD     + + +   + 
Sbjct:   232 DSVFSCESVLELTHNWGTENDPNFHYHNGNSEPQGYGHICISCDDAGALCKEIEV---KY 288

Query:   248 GGKITRQPGPIPGLNTKITSFVDPDGWKTVLV 279
             G KI   P    G    I    DPDG+   +V
Sbjct:   289 GDKIQWSPKFNQGRMKNIAFLKDPDGYSIEVV 320

GO:0046872 "metal ion binding" evidence=IEA

GO:0004462 "lactoylglutathione lyase activity" evidence=IEA;IGI

GO:0006749 "glutathione metabolic process" evidence=IGI

GO:0016829 "lyase activity" evidence=IEA

GO:0005634 "nucleus" evidence=IDA

GO:0005737 "cytoplasm" evidence=IDA

GO:0019243 "methylglyoxal catabolic process to D-lactate" evidence=IDA

RGD|1307010 Glod4 "glyoxalase domain containing 4" [Rattus norvegicus (taxid:10116)]

 Score = 261 (96.9 bits), Expect = 1.6e-22, P = 1.6e-22
 Identities = 81/275 (29%), Positives = 127/275 (46%)

Query:    22 RRLLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEE-----------KYSNAFLGFGPE 70
             RR LH V++VG+  +T+ ++ +  GM++LR  +  E            K+S   +GFGPE
Sbjct:     4 RRALHFVFKVGNRFQTVHFFRDVLGMQVLRHEEFEEGCKAACNGPYDGKWSKTMVGFGPE 63

Query:    71 QSYFVVELTYNYGVTSYDIGTGFGHLAIATEDVYKMVENIRAKGGNVTREPGPLKGMTTH 130
               +FV ELTYNYG+  Y +G  F  L +A+      V N R       R   PL  +   
Sbjct:    64 DDHFVAELTYNYGIGDYKLGNDFMGLTLASSQA---VSNAR-------RLEWPLSKVAEG 113

Query:   131 FAFVKDPDGYIFELIQRGPTP-EPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELK 189
                 + P GY F L  R P+  +P+ +V L V DL +S+ ++   LGMK+       E K
Sbjct:   114 VFETEAPGGYKFYLQDRSPSQSDPVLKVTLAVSDLQKSLNYWSNLLGMKIYE--QDEEKK 171

Query:   190 CALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGG 249
              AL  LGYA+ DQ   LEL    G  +++        +    ++    +++   +Q +  
Sbjct:   172 WAL--LGYAD-DQCK-LELQGIQGAVDHSAAFGRIAFSCPQKELPDLEDLMKRESQSILT 227

Query:   250 KITRQPGPIPGLNTKITSFVDPDGWKTVLVDNEDF 284
              +     P      ++    DPDG +   V +E F
Sbjct:   228 PLVSLDTPGKA-TVQVVILADPDGHEICFVGDEAF 261

GO:0005739 "mitochondrion" evidence=IEA;ISO

ASPGD|ASPL0000011175 AN4174 [Emericella nidulans (taxid:162425)]

 Score = 201 (75.8 bits), Expect = 2.6e-21, Sum P(2) = 2.6e-21
 Identities = 67/230 (29%), Positives = 107/230 (46%)

Query:    81 NYGVTSYDIGT--GFGHLAIATEDVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPD 138
             NY +T+ +     G+GH+AI+ +++    + +   G    ++    +G   H AFVKDPD
Sbjct:    84 NYSITNGNTEPHRGYGHIAISVDNIEAACQRLEDAGYAFQKKL--TEGRMRHIAFVKDPD 141

Query:   139 GYIFELIQR-----GPTPEP----LCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELK 189
             GY  E+I+R       + +P    L   MLRV D   S+K+Y++ LGM L+RTI++ E  
Sbjct:   142 GYWVEIIKRRDEAMSTSTDPATYRLNHTMLRVKDAEASLKYYQEVLGMTLVRTIENKEAA 201

Query:   190 CALAMLGY-AEEDQTT------------VLELAYSYGVTEYTKGNAYAQVAISTDD---V 233
               L  LGY A   Q T            +LEL ++YG TE  +G  Y            +
Sbjct:   202 FNLYFLGYPASNPQATEGANNPVAEWEGLLELTWNYG-TEKQEGKVYHNGNDEPQGFGHI 260

Query:   234 YKSAEVVNLVTQELGG-KITRQPGPIPGLNTKITSFVDPDGWKTVLVDNE 282
               S + +N   +     K+  +     G    +   +DPDG+   ++ NE
Sbjct:   261 CVSVDDLNAACERFESLKVNWKKRLTDGRMKNVAFLLDPDGYWIEVIQNE 310

GO:0009438 "methylglyoxal metabolic process" evidence=RCA

GO:0004462 "lactoylglutathione lyase activity" evidence=IEA;RCA

GO:0005634 "nucleus" evidence=IEA

GO:0005829 "cytosol" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0006749 "glutathione metabolic process" evidence=IEA

GO:0019243 "methylglyoxal catabolic process to D-lactate" evidence=IEA

ZFIN|ZDB-GENE-040912-38 glod4 "glyoxalase domain containing 4" [Danio rerio (taxid:7955)]

 Score = 244 (91.0 bits), Expect = 1.0e-20, P = 1.0e-20
 Identities = 80/275 (29%), Positives = 128/275 (46%)

Query:    22 RRLLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEE-----------KYSNAFLGFGPE 70
             +R LH V++VGD  +T  +Y +  GM++LR  +  E            K+S   +GFGPE
Sbjct:     4 KRALHFVFKVGDRTKTATFYRDVLGMKILRHEEFEEGCKATCNGPYDGKWSKTMVGFGPE 63

Query:    71 QSYFVVELTYNYGVTSYDIGTGFGHLAIATEDVYKMVENIRAKGGNVTREPGPLKGMTTH 130
               +FV ELTYNYGV  Y +G  F  L +  +   + V N +     +T + G    MT  
Sbjct:    64 DDHFVAELTYNYGVGEYRLGNDF--LGLTLQSA-QAVSNAKRLNWPLT-QVGDCLYMT-- 117

Query:   131 FAFVKDPDGYIFELIQRG-PTPEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELK 189
                 + P GY F LI +  P  +P+ +V L V DL RS+ ++   LGMK+   I+  E K
Sbjct:   118 ----EAPGGYRFYLIDKEQPNSDPVQKVSLAVSDLQRSVHYWSGLLGMKV---IEKNEDK 170

Query:   190 CALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGG 249
               +A++G++  D    LEL    G  ++         A   D +     ++   ++++  
Sbjct:   171 -KIAVMGFS--DNQCKLELQDIGGAVDHGTAFGRIAFACPRDQLPDIEALMKKDSEKIIT 227

Query:   250 KITRQPGPIPGLNTKITSFVDPDGWKTVLVDNEDF 284
              +     P      ++    DPDG +   V +E F
Sbjct:   228 PLVSLDTPGKA-TVEVVILGDPDGHEICFVGDEAF 261

GO:0005575 "cellular_component" evidence=ND

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

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Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q39366	LGUL_BRAOG	4, ., 4, ., 1, ., 5	0.7928	0.9587	0.9893	N/A	no
Q948T6	LGUL_ORYSJ	4, ., 4, ., 1, ., 5	0.7785	0.9759	0.9759	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
4th Layer	4.4.1.5	0.979

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Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input:
	GSVIVG00010980001	SubName- Full=Chromosome chr10 scaffold_297, whole genome shotgun sequence; (292 aa)
		(Vitis vinifera)
Predicted Functional Partners:
	GSVIVG00029246001	SubName- Full=Chromosome chr13 scaffold_48, whole genome shotgun sequence; (258 aa)						•	•		0.924
	GSVIVG00038137001	SubName- Full=Chromosome chr14 scaffold_9, whole genome shotgun sequence; (483 aa)						•			0.800
	GSVIVG00027369001	SubName- Full=Chromosome chr19 scaffold_4, whole genome shotgun sequence; (458 aa)						•			0.800
	GSVIVG00023836001	SubName- Full=Chromosome chr7 scaffold_31, whole genome shotgun sequence; (316 aa)						•			0.800
	GSVIVG00016002001	SubName- Full=Chromosome chr17 scaffold_12, whole genome shotgun sequence; (703 aa)						•			0.800
	GSVIVG00009475001	SubName- Full=Chromosome undetermined scaffold_235, whole genome shotgun sequence; (770 aa)						•			0.800
	GSVIVG00006903001	SubName- Full=Chromosome chr10 scaffold_179, whole genome shotgun sequence; (407 aa)						•			0.800
	GSVIVG00000550001	SubName- Full=Chromosome chr8 scaffold_106, whole genome shotgun sequence; (476 aa)						•			0.800

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Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	291
PLN02300	286	PLN02300, PLN02300, lactoylglutathione lyase	0.0
TIGR00068	150	TIGR00068, glyox_I, lactoylglutathione lyase	3e-80
cd07233	121	cd07233, Glyoxalase_I, Glyoxalase I catalyzes the	3e-54
PRK10291	129	PRK10291, PRK10291, glyoxalase I; Provisional	2e-43
TIGR00068	150	TIGR00068, glyox_I, lactoylglutathione lyase	8e-41
PRK10291	129	PRK10291, PRK10291, glyoxalase I; Provisional	6e-33
cd07233	121	cd07233, Glyoxalase_I, Glyoxalase I catalyzes the	3e-32
pfam00903	120	pfam00903, Glyoxalase, Glyoxalase/Bleomycin resist	7e-27
cd08358	127	cd08358, Glo_EDI_BRP_like_21, This conserved domai	2e-24
PLN03042	185	PLN03042, PLN03042, Lactoylglutathione lyase; Prov	6e-17
cd06587	110	cd06587, Glo_EDI_BRP_like, This domain superfamily	1e-16
PLN02367	233	PLN02367, PLN02367, lactoylglutathione lyase	1e-16
pfam00903	120	pfam00903, Glyoxalase, Glyoxalase/Bleomycin resist	4e-15
cd08358	127	cd08358, Glo_EDI_BRP_like_21, This conserved domai	6e-14
PLN03042	185	PLN03042, PLN03042, Lactoylglutathione lyase; Prov	2e-12
pfam12681	109	pfam12681, Glyoxalase_2, Glyoxalase-like domain	3e-12
COG0346	138	COG0346, GloA, Lactoylglutathione lyase and relate	2e-11
PLN02367	233	PLN02367, PLN02367, lactoylglutathione lyase	4e-11
cd06587	110	cd06587, Glo_EDI_BRP_like, This domain superfamily	1e-10
cd07245	114	cd07245, Glo_EDI_BRP_like_9, This conserved domain	1e-07
pfam12681	109	pfam12681, Glyoxalase_2, Glyoxalase-like domain	3e-07
cd07249	128	cd07249, MMCE, Methylmalonyl-CoA epimerase (MMCE)	3e-07
cd08354	122	cd08354, Glo_EDI_BRP_like_13, This conserved domai	6e-06
cd08362	120	cd08362, BphC5-RrK37_N_like, N-terminal, non-catal	6e-06
TIGR03081	128	TIGR03081, metmalonyl_epim, methylmalonyl-CoA epim	8e-06
cd08352	125	cd08352, Glo_EDI_BRP_like_1, This conserved domain	3e-05
COG0346	138	COG0346, GloA, Lactoylglutathione lyase and relate	4e-05
pfam13669	110	pfam13669, Glyoxalase_4, Glyoxalase/Bleomycin resi	4e-05
cd08346	126	cd08346, PcpA_N_like, N-terminal domain of Sphingo	5e-05
cd07242	128	cd07242, Glo_EDI_BRP_like_6, This conserved domain	8e-05
TIGR02295	294	TIGR02295, HpaD, 3,4-dihydroxyphenylacetate 2,3-di	1e-04
cd08345	113	cd08345, Fosfomycin_RP, Fosfomycin resistant prote	2e-04
COG3324	127	COG3324, COG3324, Predicted enzyme related to lact	2e-04
cd07247	114	cd07247, SgaA_N_like, N-terminal domain of Strepto	2e-04
cd07263	120	cd07263, Glo_EDI_BRP_like_16, This conserved domai	3e-04
cd07255	125	cd07255, Glo_EDI_BRP_like_12, This conserved domai	4e-04
cd07253	125	cd07253, Glo_EDI_BRP_like_2, This conserved domain	5e-04
cd07262	123	cd07262, Glo_EDI_BRP_like_19, This conserved domai	0.001
COG3324	127	COG3324, COG3324, Predicted enzyme related to lact	0.002
cd07255	125	cd07255, Glo_EDI_BRP_like_12, This conserved domai	0.002

>gnl|CDD|215169 PLN02300, PLN02300, lactoylglutathione lyase

 Score =  530 bits (1366), Expect = 0.0
 Identities = 219/289 (75%), Positives = 244/289 (84%), Gaps = 4/289 (1%)

Query: 1   MAEASPAVANAELLEWPKKDKRRLLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKY 60
            A AS A    +LLEWPKKDKRR+LH VYRVGDLDRTIK+YTEC GM+LLRKRD+PEEKY
Sbjct: 2   SAAASTAAEAEDLLEWPKKDKRRMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKY 61

Query: 61  SNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHLAIATEDVYKMVENIRAKGGNVTRE 120
           +NAFLG+GPE S FVVELTYNYGV  YDIGTGFGH  IA EDV K VE ++AKGG VTRE
Sbjct: 62  TNAFLGYGPEDSNFVVELTYNYGVDKYDIGTGFGHFGIAVEDVAKTVELVKAKGGKVTRE 121

Query: 121 PGPLKGMTTHFAFVKDPDGYIFELIQRGPTPEPLCQVMLRVGDLGRSIKFYEKALGMKLL 180
           PGP+KG  +  AFVKDPDGY FELIQRGPTPEPLCQVMLRVGDL RSIKFYEKA GMKLL
Sbjct: 122 PGPVKGGKSVIAFVKDPDGYKFELIQRGPTPEPLCQVMLRVGDLDRSIKFYEKAFGMKLL 181

Query: 181 RTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAISTDDVYKSAEVV 240
           R  D+PE K  +AM+GY  ED+TTVLEL Y+YGVTEYTKGNAYAQ+AI TDDVYK+AE +
Sbjct: 182 RKRDNPEYKYTIAMMGYGPEDKTTVLELTYNYGVTEYTKGNAYAQIAIGTDDVYKTAEAI 241

Query: 241 NLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNEDFLKELQ 289
            LV    GGKITR+PGP+PG+NTKIT+ +DPDGWKTV VDN DFLKEL+
Sbjct: 242 KLV----GGKITREPGPLPGINTKITACLDPDGWKTVFVDNIDFLKELE 286

Length = 286

>gnl|CDD|232807 TIGR00068, glyox_I, lactoylglutathione lyase

 Score =  238 bits (610), Expect = 3e-80
 Identities = 87/147 (59%), Positives = 108/147 (73%)

Query: 10  NAELLEWPKKDKRRLLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGP 69
           + +L+  PK  KRRLLH + RVGDLD+++ +YTE  GM+LLRKRD PE K+S AFLG+G 
Sbjct: 4   SGDLVADPKTKKRRLLHTMLRVGDLDKSLDFYTEVLGMKLLRKRDFPEMKFSLAFLGYGD 63

Query: 70  EQSYFVVELTYNYGVTSYDIGTGFGHLAIATEDVYKMVENIRAKGGNVTREPGPLKGMTT 129
           E S  V+ELT+N+G   YD+G GFGH+AI  +DVYK  E +RA GGNV REPGP+KG TT
Sbjct: 64  ETSAAVIELTHNWGTEKYDLGNGFGHIAIGVDDVYKACERVRALGGNVVREPGPVKGGTT 123

Query: 130 HFAFVKDPDGYIFELIQRGPTPEPLCQ 156
             AFV+DPDGY  ELIQR  T + L  
Sbjct: 124 VIAFVEDPDGYKIELIQRKSTKDGLGN 150

Lactoylglutathione lyase is also known as aldoketomutase and glyoxalase I. Glyoxylase I is a homodimer in many species. In some eukaryotes, including yeasts and plants, the orthologous protein carries a tandem duplication, is twice as long, and hits This model twice [Central intermediary metabolism, Amino sugars, Energy metabolism, Other]. Length = 150

>gnl|CDD|176659 cd07233, Glyoxalase_I, Glyoxalase I catalyzes the isomerization of the hemithioacetal, formed by a 2-oxoaldehyde and glutathione, to S-D-lactoylglutathione

 Score =  171 bits (437), Expect = 3e-54
 Identities = 59/123 (47%), Positives = 78/123 (63%), Gaps = 3/123 (2%)

Query: 24  LLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYG 83
            LH + RV DL++++ +YT+  GM+LLR++D PE K++  FLG+  E S  V+ELTYN+G
Sbjct: 1   FLHTMLRVKDLEKSLDFYTDVLGMKLLRRKDFPEGKFTLVFLGYPDEDSEGVLELTYNWG 60

Query: 84  VT-SYDIGTGFGHLAIATEDVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIF 142
               YD G GFGHLA A +DVY   E +   G  VT+ PG         AF+KDPDGY  
Sbjct: 61  TEEPYDNGNGFGHLAFAVDDVYAACERLEEMGVEVTKPPGDGGMK--GIAFIKDPDGYWI 118

Query: 143 ELI 145
           ELI
Sbjct: 119 ELI 121

Glyoxalase I (also known as lactoylglutathione lyase; EC 4.4.1.5) is part of the glyoxalase system, a two-step system for detoxifying methylglyoxal, a side product of glycolysis. This system is responsible for the conversion of reactive, acyclic alpha-oxoaldehydes into the corresponding alpha-hydroxyacids and involves 2 enzymes, glyoxalase I and II. Glyoxalase I catalyses an intramolecular redox reaction of the hemithioacetal (formed from methylglyoxal and glutathione) to form the thioester, S-D-lactoylglutathione. This reaction involves the transfer of two hydrogen atoms from C1 to C2 of the methylglyoxal, and proceeds via an ene-diol intermediate. Glyoxalase I has a requirement for bound metal ions for catalysis. Eukaryotic glyoxalase I prefers the divalent cation zinc as cofactor, whereas Escherichia coil and other prokaryotic glyoxalase I uses nickel. However, eukaryotic Trypanosomatid parasites also use nickel as a cofactor, which could possibly be explained by acquiring their GLOI gene by horizontal gene transfer. Human glyoxalase I is a two-domain enzyme and it has the structure of a domain-swapped dimer with two active sites located at the dimer interface. In yeast, in various plants, insects and Plasmodia, glyoxalase I is four-domain, possibly the result of a further gene duplication and an additional gene fusing event. Length = 121

>gnl|CDD|182358 PRK10291, PRK10291, glyoxalase I; Provisional

 Score =  144 bits (364), Expect = 2e-43
 Identities = 66/117 (56%), Positives = 86/117 (73%)

Query: 30  RVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTSYDI 89
           RVGDL R+I +YT   GM+LLR  + PE KYS AF+G+GPE    V+ELTYN+GV  Y++
Sbjct: 3   RVGDLQRSIDFYTNVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNWGVDKYEL 62

Query: 90  GTGFGHLAIATEDVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFELIQ 146
           GT +GH+A++ ++  +  E IR  GGNVTRE GP+KG TT  AFV+DPDGY  ELI+
Sbjct: 63  GTAYGHIALSVDNAAEACEKIRQNGGNVTREAGPVKGGTTVIAFVEDPDGYKIELIE 119

Length = 129

>gnl|CDD|232807 TIGR00068, glyox_I, lactoylglutathione lyase

 Score =  138 bits (349), Expect = 8e-41
 Identities = 60/130 (46%), Positives = 81/130 (62%), Gaps = 4/130 (3%)

Query: 154 LCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYG 213
           L   MLRVGDL +S+ FY + LGMKLLR  D PE+K +LA LGY +E    V+EL +++G
Sbjct: 18  LLHTMLRVGDLDKSLDFYTEVLGMKLLRKRDFPEMKFSLAFLGYGDETSAAVIELTHNWG 77

Query: 214 VTEYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDG 273
             +Y  GN +  +AI  DDVYK+ E V    + LGG + R+PGP+ G  T I    DPDG
Sbjct: 78  TEKYDLGNGFGHIAIGVDDVYKACERV----RALGGNVVREPGPVKGGTTVIAFVEDPDG 133

Query: 274 WKTVLVDNED 283
           +K  L+  + 
Sbjct: 134 YKIELIQRKS 143

Lactoylglutathione lyase is also known as aldoketomutase and glyoxalase I. Glyoxylase I is a homodimer in many species. In some eukaryotes, including yeasts and plants, the orthologous protein carries a tandem duplication, is twice as long, and hits This model twice [Central intermediary metabolism, Amino sugars, Energy metabolism, Other]. Length = 150

>gnl|CDD|182358 PRK10291, PRK10291, glyoxalase I; Provisional

 Score =  117 bits (294), Expect = 6e-33
 Identities = 58/126 (46%), Positives = 82/126 (65%), Gaps = 4/126 (3%)

Query: 158 MLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEY 217
           MLRVGDL RSI FY   LGMKLLRT ++PE K +LA +GY  E +  V+EL Y++GV +Y
Sbjct: 1   MLRVGDLQRSIDFYTNVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNWGVDKY 60

Query: 218 TKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTV 277
             G AY  +A+S D+  ++ E +    ++ GG +TR+ GP+ G  T I    DPDG+K  
Sbjct: 61  ELGTAYGHIALSVDNAAEACEKI----RQNGGNVTREAGPVKGGTTVIAFVEDPDGYKIE 116

Query: 278 LVDNED 283
           L++ +D
Sbjct: 117 LIEEKD 122

Length = 129

>gnl|CDD|176659 cd07233, Glyoxalase_I, Glyoxalase I catalyzes the isomerization of the hemithioacetal, formed by a 2-oxoaldehyde and glutathione, to S-D-lactoylglutathione

 Score =  115 bits (290), Expect = 3e-32
 Identities = 53/120 (44%), Positives = 70/120 (58%), Gaps = 9/120 (7%)

Query: 156 QVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVT 215
             MLRV DL +S+ FY   LGMKLLR  D PE K  L  LGY +ED   VLEL Y++G  
Sbjct: 3   HTMLRVKDLEKSLDFYTDVLGMKLLRRKDFPEGKFTLVFLGYPDEDSEGVLELTYNWGTE 62

Query: 216 E-YTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFV-DPDG 273
           E Y  GN +  +A + DDVY + E +    +E+G ++T+ PG       K  +F+ DPDG
Sbjct: 63  EPYDNGNGFGHLAFAVDDVYAACERL----EEMGVEVTKPPGD---GGMKGIAFIKDPDG 115

Glyoxalase I (also known as lactoylglutathione lyase; EC 4.4.1.5) is part of the glyoxalase system, a two-step system for detoxifying methylglyoxal, a side product of glycolysis. This system is responsible for the conversion of reactive, acyclic alpha-oxoaldehydes into the corresponding alpha-hydroxyacids and involves 2 enzymes, glyoxalase I and II. Glyoxalase I catalyses an intramolecular redox reaction of the hemithioacetal (formed from methylglyoxal and glutathione) to form the thioester, S-D-lactoylglutathione. This reaction involves the transfer of two hydrogen atoms from C1 to C2 of the methylglyoxal, and proceeds via an ene-diol intermediate. Glyoxalase I has a requirement for bound metal ions for catalysis. Eukaryotic glyoxalase I prefers the divalent cation zinc as cofactor, whereas Escherichia coil and other prokaryotic glyoxalase I uses nickel. However, eukaryotic Trypanosomatid parasites also use nickel as a cofactor, which could possibly be explained by acquiring their GLOI gene by horizontal gene transfer. Human glyoxalase I is a two-domain enzyme and it has the structure of a domain-swapped dimer with two active sites located at the dimer interface. In yeast, in various plants, insects and Plasmodia, glyoxalase I is four-domain, possibly the result of a further gene duplication and an additional gene fusing event. Length = 121

>gnl|CDD|216182 pfam00903, Glyoxalase, Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily

 Score =  101 bits (253), Expect = 7e-27
 Identities = 37/125 (29%), Positives = 61/125 (48%), Gaps = 8/125 (6%)

Query: 23  RLLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNY 82
           R+ H   RVGDL++++ +YT+  G +L+ + D  E    +AF   G      V+EL  N 
Sbjct: 1   RIDHVALRVGDLEKSLDFYTDVLGFKLVEEVDDGEGPLRSAFFTAGG----RVLELLLNE 56

Query: 83  GVTSYDIGT---GFGHLAIATEDVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDG 139
                  G        +A + +DV    + ++A G  + REPG   G    +++ +DPDG
Sbjct: 57  TPPPAAAGFGGHHIAFIAFSVDDVDAAYDRLKAAGVEIVREPGRH-GWGGRYSYFRDPDG 115

Query: 140 YIFEL 144
            + EL
Sbjct: 116 NLIEL 120

Length = 120

>gnl|CDD|176706 cd08358, Glo_EDI_BRP_like_21, This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

 Score = 95.1 bits (237), Expect = 2e-24
 Identities = 49/137 (35%), Positives = 71/137 (51%), Gaps = 21/137 (15%)

Query: 22  RRLLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPE-----------EKYSNAFLGFGPE 70
           RR LH V++VG+ ++TIK+Y E  GM++LR  +  E            K+S   +G+GPE
Sbjct: 1   RRALHFVFKVGNRNKTIKFYREVLGMKVLRHEEFEEGCKAACNGPYDGKWSKTMIGYGPE 60

Query: 71  QSYFVVELTYNYGVTSYDIGTGFGHLAIATEDVYKMVENIRAKGGNVTREPGPLKGMTTH 130
             +FVVELTYNYG+  Y++G  F  + I ++          AK  N      P+  +   
Sbjct: 61  DDHFVVELTYNYGIGDYELGNDFLGITIHSKQAVS-----NAKKHNW-----PVTEVEDG 110

Query: 131 FAFVKDPDGYIFELIQR 147
              VK P GY F LI +
Sbjct: 111 VYEVKAPGGYKFYLIDK 127

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. Length = 127

>gnl|CDD|215548 PLN03042, PLN03042, Lactoylglutathione lyase; Provisional

 Score = 76.8 bits (189), Expect = 6e-17
 Identities = 49/145 (33%), Positives = 74/145 (51%), Gaps = 31/145 (21%)

Query: 28  VYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGF---------GPEQSYFV--- 75
           ++R+ D   ++ +Y+   GM LL++ D PE K+S  FLG+          PE++ +    
Sbjct: 32  MFRIKDPKASLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDSETAPTDPPERTVWTFGR 91

Query: 76  ---VELTYNYGVTS------YDIG----TGFGHLAIATEDVYKMVENIRAKGGNVTREP- 121
              +ELT+N+G  S      Y  G     GFGH+ I  +DVYK  E     G    ++P 
Sbjct: 92  KATIELTHNWGTESDPEFKGYHNGNSDPRGFGHIGITVDDVYKACERFEKLGVEFVKKPD 151

Query: 122 -GPLKGMTTHFAFVKDPDGYIFELI 145
            G +KG+    AF+KDPDGY  E+ 
Sbjct: 152 DGKMKGL----AFIKDPDGYWIEIF 172

Length = 185

>gnl|CDD|211348 cd06587, Glo_EDI_BRP_like, This domain superfamily is found in a variety of structurally related metalloproteins, including the type I extradiol dioxygenases, glyoxalase I and a group of antibiotic resistance proteins

 Score = 73.6 bits (181), Expect = 1e-16
 Identities = 29/119 (24%), Positives = 46/119 (38%), Gaps = 9/119 (7%)

Query: 26  HAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVT 85
           H    V DL+  + +Y +  G E+L +     E     F       +   +   +     
Sbjct: 1   HVGLTVPDLEAAVAFYEDVLGFEVLERDGGGAE-----FAFLRLGGTRLEL---FEGDEP 52

Query: 86  SYDIGTGFGHLAIATEDVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFEL 144
           +   G G  HLA   +DV   VE ++A G  +   P          A+ +DPDG + EL
Sbjct: 53  APPSGGGGVHLAFEVDDVDAAVERLKAAGVEILGGPREEPW-GGRVAYFRDPDGNLIEL 110

This domain superfamily is found in a variety of structurally related metalloproteins, including the type I extradiol dioxygenases, glyoxalase I and a group of antibiotic resistance proteins. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). Type I extradiol dioxygenases catalyze the incorporation of both atoms of molecular oxygen into aromatic substrates, which results in the cleavage of aromatic rings. They are key enzymes in the degradation of aromatic compounds. Type I extradiol dioxygenases include class I and class II enzymes. Class I and II enzymes show sequence similarity; the two-domain class II enzymes evolved from a class I enzyme through gene duplication. Glyoxylase I catalyzes the glutathione-dependent inactivation of toxic methylglyoxal, requiring zinc or nickel ions for activity. The antibiotic resistance proteins in this family use a variety of mechanisms to block the function of antibiotics. Bleomycin resistance protein (BLMA) sequesters bleomycin's activity by directly binding to it. Whereas, three types of fosfomycin resistance proteins employ different mechanisms to render fosfomycin inactive by modifying the fosfomycin molecule. Although the proteins in this superfamily are functionally distinct, their structures are similar. The difference among the three dimensional structures of the three types of proteins in this superfamily is interesting from an evolutionary perspective. Both glyoxalase I and BLMA show domain swapping between subunits. However, there is no domain swapping for type 1 extradiol dioxygenases. Length = 110

>gnl|CDD|177995 PLN02367, PLN02367, lactoylglutathione lyase

 Score = 76.6 bits (188), Expect = 1e-16
 Identities = 52/153 (33%), Positives = 74/153 (48%), Gaps = 34/153 (22%)

Query: 28  VYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSY-------------- 73
           +YR+ D   ++ +Y+   GM LL++ D PE K+S  F+G+    S               
Sbjct: 80  MYRIKDPKASLDFYSRVLGMSLLKRLDFPEMKFSLYFMGYEDTASAPTDPTERTVWTFGQ 139

Query: 74  -FVVELTYNYGVTS------YDIGT----GFGHLAIATEDVYKMVENIRAKGGNVTREP- 121
              +ELT+N+G  S      Y  G     GFGH+ I  +DVYK  E     G    ++P 
Sbjct: 140 KATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFEELGVEFVKKPN 199

Query: 122 -GPLKGMTTHFAFVKDPDGY---IFELIQRGPT 150
            G +KG+    AF+KDPDGY   IF+L   G T
Sbjct: 200 DGKMKGI----AFIKDPDGYWIEIFDLKTIGTT 228

Length = 233

>gnl|CDD|216182 pfam00903, Glyoxalase, Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily

 Score = 69.8 bits (171), Expect = 4e-15
 Identities = 37/123 (30%), Positives = 53/123 (43%), Gaps = 12/123 (9%)

Query: 156 QVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVT 215
            V LRVGDL +S+ FY   LG KL+  +D  E      +          VLEL  +    
Sbjct: 4   HVALRVGDLEKSLDFYTDVLGFKLVEEVDDGEGP----LRSAFFTAGGRVLELLLNETPP 59

Query: 216 EY---TKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPD 272
                  G+  A +A S DDV  + + +    +  G +I R+PG       + + F DPD
Sbjct: 60  PAAAGFGGHHIAFIAFSVDDVDAAYDRL----KAAGVEIVREPGRHGW-GGRYSYFRDPD 114

Query: 273 GWK 275
           G  
Sbjct: 115 GNL 117

Length = 120

>gnl|CDD|176706 cd08358, Glo_EDI_BRP_like_21, This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

 Score = 67.0 bits (164), Expect = 6e-14
 Identities = 39/134 (29%), Positives = 62/134 (46%), Gaps = 27/134 (20%)

Query: 159 LRVGDLGRSIKFYEKALGMKLLR----------TIDSP-ELKCALAMLGYAEEDQTTVLE 207
            +VG+  ++IKFY + LGMK+LR            + P + K +  M+GY  ED   V+E
Sbjct: 8   FKVGNRNKTIKFYREVLGMKVLRHEEFEEGCKAACNGPYDGKWSKTMIGYGPEDDHFVVE 67

Query: 208 LAYSYGVTEYTKGNAYAQVAISTDDVYKSAEVVN-LVTQELGGKITRQPGPIPGLNTKIT 266
           L Y+YG+ +Y  GN +  + I +     +A+  N  VT+   G    +            
Sbjct: 68  LTYNYGIGDYELGNDFLGITIHSKQAVSNAKKHNWPVTEVEDGVYEVK------------ 115

Query: 267 SFVDPDGWKTVLVD 280
               P G+K  L+D
Sbjct: 116 ---APGGYKFYLID 126

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. Length = 127

>gnl|CDD|215548 PLN03042, PLN03042, Lactoylglutathione lyase; Provisional

 Score = 64.5 bits (157), Expect = 2e-12
 Identities = 49/150 (32%), Positives = 74/150 (49%), Gaps = 43/150 (28%)

Query: 156 QVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTV---------- 205
           Q M R+ D   S+ FY + LGM LL+ +D PE+K +L  LGY  ED  T           
Sbjct: 30  QTMFRIKDPKASLDFYSRVLGMSLLKRLDFPEMKFSLYFLGY--EDSETAPTDPPERTVW 87

Query: 206 -------LELAYSYGVTE-------YTKGNA----YAQVAISTDDVYKSAEVVNLVTQEL 247
                  +EL +++G TE       Y  GN+    +  + I+ DDVYK+ E      ++L
Sbjct: 88  TFGRKATIELTHNWG-TESDPEFKGYHNGNSDPRGFGHIGITVDDVYKACERF----EKL 142

Query: 248 GGKITRQP--GPIPGLNTKITSFV-DPDGW 274
           G +  ++P  G + GL     +F+ DPDG+
Sbjct: 143 GVEFVKKPDDGKMKGL-----AFIKDPDGY 167

Length = 185

>gnl|CDD|221708 pfam12681, Glyoxalase_2, Glyoxalase-like domain

 Score = 61.7 bits (150), Expect = 3e-12
 Identities = 29/116 (25%), Positives = 47/116 (40%), Gaps = 8/116 (6%)

Query: 30  RVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTSYDI 89
            V DL+    +Y E  G E+    +  + +Y+   LG       F+  +           
Sbjct: 2   PVSDLEAARAFYEELLGFEV----EEEDGEYAEFRLGLVLALGGFIELIGLP---EPDAP 54

Query: 90  GTGFGHLAIATEDVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFELI 145
           G G  HL    +D+  +V  ++A GG +   P           +V+DPDG + ELI
Sbjct: 55  GGGGVHLYFEVDDLDALVARLKAAGGTILEPPEDTPWG-GREFYVRDPDGNLIELI 109

This domain is related to the Glyoxalase domain pfam00903. Length = 109

>gnl|CDD|223423 COG0346, GloA, Lactoylglutathione lyase and related lyases [Amino acid transport and metabolism]

 Score = 60.5 bits (146), Expect = 2e-11
 Identities = 27/141 (19%), Positives = 44/141 (31%), Gaps = 19/141 (13%)

Query: 22  RRLLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYN 81
             + H    V DL+ +I +YT+  G+ L++      +      L F          L + 
Sbjct: 1   MGIHHVTLAVPDLEASIDFYTDVLGLRLVKDTVNEADDGGGYHLLFLDGDGGPGELLAFF 60

Query: 82  YGVTSYDIG-------------TGFGHLAIATED---VYKMVENIRAKGGNVTREPGPLK 125
                   G              G GHLA   +D       +  +   G  +        
Sbjct: 61  GFEGRAGTGFVGDVALGVPGGDLGLGHLAFEVDDEAFGDAALAFLDPDGVRIELGEPGRG 120

Query: 126 GMTTHFAFVKDPDGYIFELIQ 146
           G      + +DPDG + EL  
Sbjct: 121 G---VHVYFRDPDGILIELAT 138

Length = 138

>gnl|CDD|177995 PLN02367, PLN02367, lactoylglutathione lyase

 Score = 61.2 bits (148), Expect = 4e-11
 Identities = 46/148 (31%), Positives = 73/148 (49%), Gaps = 39/148 (26%)

Query: 156 QVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEE--------------- 200
           Q M R+ D   S+ FY + LGM LL+ +D PE+K +L  +GY +                
Sbjct: 78  QTMYRIKDPKASLDFYSRVLGMSLLKRLDFPEMKFSLYFMGYEDTASAPTDPTERTVWTF 137

Query: 201 DQTTVLELAYSYGVTE-------YTKGNA----YAQVAISTDDVYKSAEVVNLVTQELGG 249
            Q   +EL +++G TE       Y  GN+    +  + I+ DDVYK+ E      +ELG 
Sbjct: 138 GQKATIELTHNWG-TESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERF----EELGV 192

Query: 250 KITRQP--GPIPGLNTKITSFV-DPDGW 274
           +  ++P  G + G+     +F+ DPDG+
Sbjct: 193 EFVKKPNDGKMKGI-----AFIKDPDGY 215

Length = 233

>gnl|CDD|211348 cd06587, Glo_EDI_BRP_like, This domain superfamily is found in a variety of structurally related metalloproteins, including the type I extradiol dioxygenases, glyoxalase I and a group of antibiotic resistance proteins

 Score = 57.4 bits (139), Expect = 1e-10
 Identities = 32/118 (27%), Positives = 42/118 (35%), Gaps = 13/118 (11%)

Query: 156 QVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVT 215
            V L V DL  ++ FYE  LG ++L            A L        T LEL +     
Sbjct: 1   HVGLTVPDLEAAVAFYEDVLGFEVLERDGGGA---EFAFLRLGG----TRLEL-FEGDEP 52

Query: 216 EYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDG 273
               G     +A   DDV  + E +    +  G +I   P   P        F DPDG
Sbjct: 53  APPSGGGGVHLAFEVDDVDAAVERL----KAAGVEILGGPREEPWGGRVAY-FRDPDG 105

This domain superfamily is found in a variety of structurally related metalloproteins, including the type I extradiol dioxygenases, glyoxalase I and a group of antibiotic resistance proteins. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). Type I extradiol dioxygenases catalyze the incorporation of both atoms of molecular oxygen into aromatic substrates, which results in the cleavage of aromatic rings. They are key enzymes in the degradation of aromatic compounds. Type I extradiol dioxygenases include class I and class II enzymes. Class I and II enzymes show sequence similarity; the two-domain class II enzymes evolved from a class I enzyme through gene duplication. Glyoxylase I catalyzes the glutathione-dependent inactivation of toxic methylglyoxal, requiring zinc or nickel ions for activity. The antibiotic resistance proteins in this family use a variety of mechanisms to block the function of antibiotics. Bleomycin resistance protein (BLMA) sequesters bleomycin's activity by directly binding to it. Whereas, three types of fosfomycin resistance proteins employ different mechanisms to render fosfomycin inactive by modifying the fosfomycin molecule. Although the proteins in this superfamily are functionally distinct, their structures are similar. The difference among the three dimensional structures of the three types of proteins in this superfamily is interesting from an evolutionary perspective. Both glyoxalase I and BLMA show domain swapping between subunits. However, there is no domain swapping for type 1 extradiol dioxygenases. Length = 110

>gnl|CDD|176669 cd07245, Glo_EDI_BRP_like_9, This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

 Score = 49.1 bits (118), Expect = 1e-07
 Identities = 33/122 (27%), Positives = 49/122 (40%), Gaps = 9/122 (7%)

Query: 24  LLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYG 83
           L H   RV DL+ +  +YT+  G   L +   P   +  A+L  G      ++E      
Sbjct: 1   LDHVALRVPDLEASRAFYTDVLG---LEEGPRPPFLFPGAWLYAGDGPQLHLIEED---P 54

Query: 84  VTSYDIGTG-FGHLAIATEDVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIF 142
             +   G G   H+A   +D+      ++A G   T    P  G      FV+DPDG   
Sbjct: 55  PDALPEGPGRDDHIAFRVDDLDAFRARLKAAGVPYTESDVPGDG-VRQL-FVRDPDGNRI 112

Query: 143 EL 144
           EL
Sbjct: 113 EL 114

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases. Length = 114

>gnl|CDD|221708 pfam12681, Glyoxalase_2, Glyoxalase-like domain

 Score = 47.4 bits (113), Expect = 3e-07
 Identities = 27/124 (21%), Positives = 40/124 (32%), Gaps = 30/124 (24%)

Query: 159 LRVGDLGRSIKFYEKALGMKL---------LRTIDSPELKCALAMLGYAEEDQTTVLELA 209
           L V DL  +  FYE+ LG ++          R      L   + ++G  E D        
Sbjct: 1   LPVSDLEAARAFYEELLGFEVEEEDGEYAEFRLGLVLALGGFIELIGLPEPDAP------ 54

Query: 210 YSYGVTEYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFV 269
                     G     +    DD+     +V  + +  GG I   P   P    +     
Sbjct: 55  ----------GGGGVHLYFEVDDL---DALVARL-KAAGGTILEPPEDTPW-GGREFYVR 99

Query: 270 DPDG 273
           DPDG
Sbjct: 100 DPDG 103

This domain is related to the Glyoxalase domain pfam00903. Length = 109

>gnl|CDD|211350 cd07249, MMCE, Methylmalonyl-CoA epimerase (MMCE)

 Score = 48.3 bits (116), Expect = 3e-07
 Identities = 33/137 (24%), Positives = 55/137 (40%), Gaps = 23/137 (16%)

Query: 24  LLHAVYRVGDLDRTIKYYTECFGMELL-RKRDVPEEKYSNAFLGFGP----------EQS 72
           + H    V DL+  +K+Y +  G+    R+    E+    AFLG G           + S
Sbjct: 1   IDHIGIAVPDLEAALKFYRDVLGVGPWEREEVPSEQGVRLAFLGLGNVQIELIEPLDDDS 60

Query: 73  YFVVELTYNYGVTSYDIGTGFGHLAIATEDVYKMVENIRAKGGNVTREPGPLKGMT-THF 131
                L           G G  H+A   +D+   +  ++A+G  +  + GP  G      
Sbjct: 61  PIAKFLEKR--------GEGLHHIAFEVDDIDAALARLKAQGVRLL-QEGPRIGAGGKRV 111

Query: 132 AFV--KDPDGYIFELIQ 146
           AF+  KD  G + EL++
Sbjct: 112 AFLHPKDTGGVLIELVE 128

MMCE, also called methylmalonyl-CoA racemase (EC 5.1.99.1) interconverts (2R)-methylmalonyl-CoA and (2S)-methylmalonyl-CoA. MMCE has been found in bacteria, archaea, and in animals. In eukaryotes, MMCE is an essential enzyme in a pathway that converts propionyl-CoA to succinyl-CoA, and is important in the breakdown of odd-chain length fatty acids, branched-chain amino acids, and other metabolites. In bacteria, MMCE participates in the reverse pathway for propionate fermentation, glyoxylate regeneration, and the biosynthesis of polyketide antibiotics. MMCE is closely related to glyoxalase I and type I extradiol dioxygenases. Length = 128

>gnl|CDD|176702 cd08354, Glo_EDI_BRP_like_13, This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

 Score = 44.2 bits (105), Expect = 6e-06
 Identities = 33/131 (25%), Positives = 54/131 (41%), Gaps = 27/131 (20%)

Query: 27  AVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTS 86
           A+Y V DL+    +Y +  G+EL+ K D        AF   G       + L ++ G TS
Sbjct: 5   ALY-VDDLEAAEAFYEDVLGLELMLKED-----RRLAFFWVGGRG----MLLLFDPGATS 54

Query: 87  YDIGTGFGH---------LAIATEDVYKMVENIRAKGGNV---TREPGPLKGMTTHFAFV 134
              G    H          AI  E++ +   ++ AKG  +    + P   + +     + 
Sbjct: 55  TPGGEIPPHGGSGPGHFAFAIPAEELAEWEAHLEAKGVAIESEVQWPRGGRSL-----YF 109

Query: 135 KDPDGYIFELI 145
           +DPDG + EL 
Sbjct: 110 RDPDGNLLELA 120

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. Length = 122

>gnl|CDD|176710 cd08362, BphC5-RrK37_N_like, N-terminal, non-catalytic, domain of BphC5 (2,3-dihydroxybiphenyl 1,2-dioxygenase) from Rhodococcus rhodochrous K37, and similar proteins

 Score = 44.3 bits (105), Expect = 6e-06
 Identities = 30/127 (23%), Positives = 44/127 (34%), Gaps = 16/127 (12%)

Query: 22  RRLLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYN 81
             L      V DL     +Y E +G+       V  E     +L       + ++ L   
Sbjct: 2   TALRGVGLGVPDLAAAAAFYREVWGLS------VVAEDDGIVYLR-ATGSEHHILRLR-- 52

Query: 82  YGVTSYDIGTGFGHLAIAT-EDVYKMVENIRAKGGNVTREPGPLK--GMTTHFAFVKDPD 138
               S          ++A+  DV  +   + A+GG V  EPG     G    F F  DPD
Sbjct: 53  ---RSDRNRLDVVSFSVASRADVDALARQVAARGGTVLSEPGATDDPGGGYGFRFF-DPD 108

Query: 139 GYIFELI 145
           G + E  
Sbjct: 109 GRLIEFS 115

2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC) catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). The enzyme contains a N-terminal and a C-terminal domain of similar structure fold, resulting from an ancient gene duplication. BphC belongs to the type I extradiol dioxygenase family, which requires a metal in the active site for its catalytic activity. Polychlorinated biphenyl degrading bacteria demonstrate multiplicity of BphCs. Bacterium Rhodococcus rhodochrous K37 has eight genes encoding BphC enzymes. This family includes the N-terminal domain of BphC5-RrK37. The crystal structure of the protein from Novosphingobium aromaticivorans has a Mn(II)in the active site, although most proteins of type I extradiol dioxygenases are activated by Fe(II). Length = 120

>gnl|CDD|213772 TIGR03081, metmalonyl_epim, methylmalonyl-CoA epimerase

 Score = 43.9 bits (104), Expect = 8e-06
 Identities = 32/129 (24%), Positives = 56/129 (43%), Gaps = 6/129 (4%)

Query: 23  RLLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNY 82
           R+ H    V DL+   K+Y +  G ++    ++PE+     F+  G  +   +  L  + 
Sbjct: 1   RIDHVGIAVPDLEEAAKFYEDVLGAQVSEIEELPEQGVKVVFIALGNTKVELLEPLGEDS 60

Query: 83  GVTSY--DIGTGFGHLAIATEDVYKMVENIRAKGGNVTREPGPLKGMTTH-FAFV--KDP 137
            +  +    G G  H+AI  +D+   +E ++ KG  +  E  P  G      AF+  K  
Sbjct: 61  PIAKFLEKNGGGIHHIAIEVDDIEAALETLKEKGVRLIDEE-PRIGAHGKPVAFLHPKST 119

Query: 138 DGYIFELIQ 146
            G + EL Q
Sbjct: 120 GGVLIELEQ 128

Members of this protein family are the enzyme methylmalonyl-CoA epimerase (EC 5.1.99.1), also called methylmalonyl-CoA racemase. This enzyme converts (2R)-methylmalonyl-CoA to (2S)-methylmalonyl-CoA, which is then a substrate for methylmalonyl-CoA mutase (TIGR00642). It is known in bacteria, archaea, and as a mitochondrial protein in animals. It is closely related to lactoylglutathione lyase (TIGR00068), which is also called glyoxylase I, and is also a homodimer. Length = 128

>gnl|CDD|211358 cd08352, Glo_EDI_BRP_like_1, This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

 Score = 42.7 bits (101), Expect = 3e-05
 Identities = 39/118 (33%), Positives = 51/118 (43%), Gaps = 9/118 (7%)

Query: 33  DLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTY--NYGV-TSYDI 89
           D  R+ ++Y E  G+ L+R+   PE K     L    E     +EL    N     SY  
Sbjct: 13  DYARSKEFYVEVLGLTLIRETYRPERKSYKLDLALNGEY---QIELFSFPNPPPRPSYPE 69

Query: 90  GTGFGHLAIATEDVYKMVENIRAKGGNVTREPGPLKGMT-THFAFVKDPDGYIFELIQ 146
             G  HLA A ED+   V  ++A G  V  EP  +   T   F F  DPDG   EL +
Sbjct: 70  ACGLRHLAFAVEDIEAAVAELKAHG--VEVEPIRVDEFTGKRFTFFYDPDGLPLELYE 125

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping. Length = 125

>gnl|CDD|223423 COG0346, GloA, Lactoylglutathione lyase and related lyases [Amino acid transport and metabolism]

 Score = 42.4 bits (99), Expect = 4e-05
 Identities = 26/131 (19%), Positives = 42/131 (32%), Gaps = 17/131 (12%)

Query: 156 QVMLRVGDLGRSIKFYEKALGMKLL-RTIDSPELKCALAMLGYAEEDQTTVLELAYSY-- 212
            V L V DL  SI FY   LG++L+  T++  +      +L    +     L   + +  
Sbjct: 5   HVTLAVPDLEASIDFYTDVLGLRLVKDTVNEADDGGGYHLLFLDGDGGPGELLAFFGFEG 64

Query: 213 ----------GVTEYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLN 262
                      +           +A   DD       +  +  + G +I        G  
Sbjct: 65  RAGTGFVGDVALGVPGGDLGLGHLAFEVDDEAFGDAALAFLDPD-GVRIELGEPGRGG-- 121

Query: 263 TKITSFVDPDG 273
                F DPDG
Sbjct: 122 -VHVYFRDPDG 131

Length = 138

>gnl|CDD|222305 pfam13669, Glyoxalase_4, Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily

 Score = 41.9 bits (99), Expect = 4e-05
 Identities = 24/110 (21%), Positives = 37/110 (33%), Gaps = 3/110 (2%)

Query: 26  HAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVT 85
           H    V DLD    ++ +  G+          +    AF   G +     VEL       
Sbjct: 2   HIGIVVPDLDAAAAFWVDLLGLGPWGDYRDEPQNVDLAFARLG-DGPAVEVELIQPLDGE 60

Query: 86  SYDI--GTGFGHLAIATEDVYKMVENIRAKGGNVTREPGPLKGMTTHFAF 133
           S+    G G  H+A   +D+   V  + A+G  V  +           AF
Sbjct: 61  SFLDKGGPGLHHIAYWVDDLDAAVARLEAQGVRVAPKGPRAGAAGRRVAF 110

Length = 110

>gnl|CDD|211356 cd08346, PcpA_N_like, N-terminal domain of Sphingobium chlorophenolicum 2,6-dichloro-p-hydroquinone 1,2-dioxygenase (PcpA), and similar proteins

 Score = 41.8 bits (99), Expect = 5e-05
 Identities = 30/134 (22%), Positives = 48/134 (35%), Gaps = 25/134 (18%)

Query: 26  HAVYRVGDLDRTIKYYTECFGMELLRK---RDVPEEK---YSNAFLGFGPEQSYFVVELT 79
           H      D   T+ +YT+  G+ L++K   +D P      + +     G   ++F     
Sbjct: 4   HVTLVTRDAQETVDFYTDVLGLRLVKKTVNQDDPGTYHLFFGDGLGSPGTLLTFFEWPDA 63

Query: 80  YNYGVTSYDIGTG-FGHLAIA---TEDVYKMVENIRAKGGNVTREPGPLKGMTTHFAF-- 133
              G      G G   H+A +      +    E +RA G  V+       G+   F    
Sbjct: 64  GPKGRR----GPGQIHHIAFSVPSEASLEAWRERLRAAGVPVS-------GVVDRFGERS 112

Query: 134 --VKDPDGYIFELI 145
              +DPDG   EL 
Sbjct: 113 LYFEDPDGIRLELT 126

The N-terminal domain of Sphingobium chlorophenolicum (formerly Sphingomonas chlorophenolica) 2,6-dichloro-p-hydroquinone1,2-dioxygenase (PcpA), and similar proteins. PcpA is a key enzyme in the pentachlorophenol (PCP) degradation pathway, catalyzing the conversion of 2,6-dichloro-p-hydroquinone to 2-chloromaleylacetate. This domain belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. Length = 126

>gnl|CDD|176666 cd07242, Glo_EDI_BRP_like_6, This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

 Score = 41.1 bits (97), Expect = 8e-05
 Identities = 29/126 (23%), Positives = 48/126 (38%), Gaps = 9/126 (7%)

Query: 26  HAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVT 85
           H    V DL+R+  +Y    G+    +    E+  S      G   +Y V++        
Sbjct: 4   HVELTVRDLERSRAFYDWLLGLLGFEEVKEWEDGRSWRAGDGG---TYLVLQQADGESAG 60

Query: 86  SYDI-GTGFGHLAI---ATEDVYKMVENIRAKGGNVTREPG--PLKGMTTHFAFVKDPDG 139
            +D    G  HLA    + E V ++   +  +G  +   P      G   +  F +DPDG
Sbjct: 61  RHDRRNPGLHHLAFRAPSREAVDELYARLAKRGAEILYAPREPYAGGPGYYALFFEDPDG 120

Query: 140 YIFELI 145
              EL+
Sbjct: 121 IRLELV 126

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping. Length = 128

>gnl|CDD|213698 TIGR02295, HpaD, 3,4-dihydroxyphenylacetate 2,3-dioxygenase

 Score = 42.8 bits (101), Expect = 1e-04
 Identities = 39/173 (22%), Positives = 62/173 (35%), Gaps = 30/173 (17%)

Query: 23  RLLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFL-GFGPEQSYFVVELTYN 81
           R  H   RV DLD++ ++Y +  G          E      +L G    Q + +V     
Sbjct: 4   RTGHVELRVTDLDKSREFYVDLLGFR------ETESDKEYIYLRGIEEFQHHSLVLTKAP 57

Query: 82  YGVTSYDIGTGFGHLAIATEDVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYI 141
               SY      G      ED+ K  +  +  G  V       +        V+DP GY 
Sbjct: 58  SAALSY-----IGFRVSKEEDLDKAADFFQKLGHPVRLVRDGGQPEALR---VEDPFGYP 109

Query: 142 FEL---------------IQRGPTPEPLCQVMLRVGDLGRSIKFYEKALGMKL 179
            E                  RG +P  L    + V D+ R+++FY++ LG ++
Sbjct: 110 IEFYFEMEKVERLLRRYHRHRGVSPVRLDHFNVFVPDVQRALRFYKEELGFRV 162

This enzyme catalyzes the second step in the degradation of 4-hydroxyphenylacetate to succinate and pyruvate. 4-hydroxyphenylacetate arises from the degradation of tyrosine. The substrate, 3,4-dihydroxyphenylacetate (homoprotocatechuate) arises from the action of a hydroxylase on 4-hydroxyphenylacetate. The aromatic ring is opened by this dioxygenase exo to the 3,4-diol resulting in 2-hydroxy-5-carboxymethylmuconate semialdehyde. The enzyme from Bacillus brevis contains manganese. Length = 294

>gnl|CDD|176693 cd08345, Fosfomycin_RP, Fosfomycin resistant protein; inhibits the biological function of fosfomycin

 Score = 40.3 bits (94), Expect = 2e-04
 Identities = 32/124 (25%), Positives = 53/124 (42%), Gaps = 21/124 (16%)

Query: 26  HAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKY---SNAFLGFGPEQSYFVVELTYNY 82
           H    V DL+++I +Y +  G EL+      +E Y   +  ++    E S    E TY  
Sbjct: 1   HITLIVKDLNKSIAFYRDILGAELIYSSS--KEAYFELAGLWICLMEEDSLQGPERTYT- 57

Query: 83  GVTSYDIGTGFGHLA--IATEDVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGY 140
                       H+A  I +E+  +  E ++A G  +  E   ++G      F  DPDG+
Sbjct: 58  ------------HIAFQIQSEEFDEYTERLKALGVEMKPERPRVQGEGRSIYFY-DPDGH 104

Query: 141 IFEL 144
           + EL
Sbjct: 105 LLEL 108

This family contains three types of fosfomycin resistant protein. Fosfomycin inhibits the enzyme UDP-N-acetylglucosamine-3-enolpyruvyltransferase (MurA), which catalyzes the first committed step in bacterial cell wall biosynthesis. The three types of fosfomycin resistance proteins, employ different mechanisms to render fosfomycin [(1R,2S)-epoxypropylphosphonic acid] inactive. FosB catalyzes the addition of L-cysteine to the epoxide ring of fosfomycin. FosX catalyzes the addition of a water molecule to the C1 position of the antibiotic with inversion of configuration at C1. FosA catalyzes the addition of glutathione to the antibiotic fosfomycin, making it inactive. Catalytic activities of both FosX and FosA are Mn(II)-dependent, but FosB is activated by Mg(II). Fosfomycin resistant proteins are evolutionarily related to glyoxalase I and type I extradiol dioxygenases. Length = 113

>gnl|CDD|225861 COG3324, COG3324, Predicted enzyme related to lactoylglutathione lyase [General function prediction only]

 Score = 40.0 bits (94), Expect = 2e-04
 Identities = 29/121 (23%), Positives = 37/121 (30%), Gaps = 24/121 (19%)

Query: 159 LRVGDLGRSIKFYEKALGMKLLR--TIDSPELKCALA----MLGYAEEDQTTVLELAYSY 212
           L V DL R+  FYEK  G        +         A      G                
Sbjct: 15  LPVSDLERAKAFYEKVFGWTFEDYFDMGEMRYAVFPADGAGAGGGLMARP---------- 64

Query: 213 GVTEYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPD 272
                  G     +  + DD+  + E V       GGK+ R     PG    I  FVDP+
Sbjct: 65  ---GSPPGGGGWVIYFAVDDIDATLERV----VAAGGKVLRPKTEFPGGGR-IAHFVDPE 116

Query: 273 G 273
           G
Sbjct: 117 G 117

Length = 127

>gnl|CDD|176671 cd07247, SgaA_N_like, N-terminal domain of Streptomyces griseus SgaA (suppression of growth disturbance caused by A-factor at a high concentration under high osmolality during early growth phase), and similar domains

 Score = 39.5 bits (93), Expect = 2e-04
 Identities = 27/122 (22%), Positives = 36/122 (29%), Gaps = 21/122 (17%)

Query: 31  VGDLDRTIKYYTECFGMELLRKRDVPEEKYS------NAFLGFGPEQSYFVVELTYNYGV 84
             D +R   +Y   FG             Y+       A  G                G 
Sbjct: 8   TTDPERAKAFYGAVFGWTF-EDMGDGGGDYAVFSTGGGAVGGLMKAPEPAAGSPP---GW 63

Query: 85  TSYDIGTGFGHLAIATEDVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFEL 144
             Y           A +DV      + A GG V   P  + G+   FA   DP+G +F L
Sbjct: 64  LVY----------FAVDDVDAAAARVEAAGGKVLVPPTDIPGV-GRFAVFADPEGAVFGL 112

Query: 145 IQ 146
            Q
Sbjct: 113 WQ 114

SgaA suppresses the growth disturbances caused by high osmolarity and a high concentration of A-factor, a microbial hormone, during the early growth phase in Streptomyces griseus. A-factor (2-isocapryloyl-3R-hydroxymethyl-gamma-butyrolactone) controls morphological differentiation and secondary metabolism in Streptomyces griseus. It is a chemical signaling molecule that at a very low concentration acts as a switch for yellow pigment production, aerial mycelium formation, streptomycin production, and streptomycin resistance. The structure and amino acid sequence of SgaA are closely related to a group of antibiotics resistance proteins, including bleomycin resistance protein, mitomycin resistance protein, and fosfomycin resistance proteins. SgaA might also function as a streptomycin resistance protein. Length = 114

>gnl|CDD|211353 cd07263, Glo_EDI_BRP_like_16, This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

 Score = 39.5 bits (93), Expect = 3e-04
 Identities = 34/126 (26%), Positives = 54/126 (42%), Gaps = 11/126 (8%)

Query: 26  HAVYRVGDLDRTIKYYTECFGMELLRKRDVP-EEKYSNAFLGFGPEQSYFV-VELTYNYG 83
                V D D+ + +YTE  G E+  + DVP    +   ++   P  S    + L     
Sbjct: 1   LVSLYVDDQDKALAFYTEKLGFEV--REDVPMGGGFR--WVTVAPPGSPETSLVLAPPAN 56

Query: 84  VTSYDIGT---GFGHLAIATEDVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGY 140
             +   G    G   L + T+D+    E ++A+G   T EP  +   T   A  +DPDG 
Sbjct: 57  PAAMASGLQPGGTPGLVLVTDDIDATYEELKARGVEFTEEPREMPYGT--VAVFRDPDGN 114

Query: 141 IFELIQ 146
           +F L+Q
Sbjct: 115 LFVLVQ 120

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. Length = 120

>gnl|CDD|211352 cd07255, Glo_EDI_BRP_like_12, This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

 Score = 39.1 bits (92), Expect = 4e-04
 Identities = 15/30 (50%), Positives = 20/30 (66%)

Query: 156 QVMLRVGDLGRSIKFYEKALGMKLLRTIDS 185
            V LRV DL RS+ FY+  LG+++L   DS
Sbjct: 5   AVTLRVADLERSLAFYQDVLGLEVLERTDS 34

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. Length = 125

>gnl|CDD|176676 cd07253, Glo_EDI_BRP_like_2, This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

 Score = 38.7 bits (91), Expect = 5e-04
 Identities = 34/128 (26%), Positives = 57/128 (44%), Gaps = 12/128 (9%)

Query: 22  RRLLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYN 81
           +R+ H V  V D++ T+ +YT   GME++R  +    + +   L FG  Q   +  +   
Sbjct: 2   KRIDHVVLTVADIEATLDFYTRVLGMEVVRFGE-EVGRKA---LRFGS-QKINLHPVGGE 56

Query: 82  YGVTSYDIGTGFGHLAIATEDVYK-MVENIRAKGGNVTREPGPLKGMTTHFA----FVKD 136
           +   +   G G   L + TE     +V ++ A G  V  E GP+            + +D
Sbjct: 57  FEPAAGSPGPGSDDLCLITEPPIDELVAHLEAHG--VPIEEGPVPRTGARGPITSVYFRD 114

Query: 137 PDGYIFEL 144
           PDG + EL
Sbjct: 115 PDGNLIEL 122

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping. Length = 125

>gnl|CDD|176683 cd07262, Glo_EDI_BRP_like_19, This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

 Score = 37.9 bits (89), Expect = 0.001
 Identities = 30/136 (22%), Positives = 43/136 (31%), Gaps = 38/136 (27%)

Query: 157 VMLRVGDLGRSIKFYEKA---LGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYG 213
           V L V DL R+  FY+     LG+K +              +GY +        +   + 
Sbjct: 4   VTLGVNDLERARAFYDAVLAPLGIKRVMEDGP-------GAVGYGKGGGGPDFWVTKPFD 56

Query: 214 VTEYTKGNAYAQVAISTDD------VYKSAEVVNLVTQELGGKITRQPGPIP-------G 260
               T GN    VA +          + +A          GG     PG  P        
Sbjct: 57  GEPATAGNG-THVAFAAPSREAVDAFHAAA-------LAAGGTDEGAPGLRPHYGPGYYA 108

Query: 261 LNTKITSFV-DPDGWK 275
                 ++V DPDG K
Sbjct: 109 ------AYVRDPDGNK 118

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. Length = 123

>gnl|CDD|225861 COG3324, COG3324, Predicted enzyme related to lactoylglutathione lyase [General function prediction only]

 Score = 37.3 bits (87), Expect = 0.002
 Identities = 29/123 (23%), Positives = 41/123 (33%), Gaps = 20/123 (16%)

Query: 30  RVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAF------LGFGPEQSYFVVELTYNYG 83
            V DL+R   +Y + FG       D+ E +Y+          G    +           G
Sbjct: 16  PVSDLERAKAFYEKVFGWTFEDYFDMGEMRYAVFPADGAGAGGGLMARPGSPPGGG---G 72

Query: 84  VTSYDIGTGFGHLAIATEDVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFE 143
              Y           A +D+   +E + A GG V R      G      FV DP+G  F 
Sbjct: 73  WVIY----------FAVDDIDATLERVVAAGGKVLRPKTEFPGGGRIAHFV-DPEGNRFG 121

Query: 144 LIQ 146
           L  
Sbjct: 122 LWS 124

Length = 127

>gnl|CDD|211352 cd07255, Glo_EDI_BRP_like_12, This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

 Score = 37.1 bits (87), Expect = 0.002
 Identities = 23/76 (30%), Positives = 36/76 (47%), Gaps = 7/76 (9%)

Query: 23 RLLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNY 82
          R+     RV DL+R++ +Y +  G+E+L + D      S A LG G ++   V+E   + 
Sbjct: 2  RIGAVTLRVADLERSLAFYQDVLGLEVLERTD------STAVLGTGGKRPLLVLEEDPDA 55

Query: 83 GVTSYDIGTGFGHLAI 98
                  TG  H AI
Sbjct: 56 PPAPPG-TTGLYHFAI 70

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. Length = 125

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	291
PLN02300	286	lactoylglutathione lyase	100.0
KOG2943	299	consensus Predicted glyoxalase [Carbohydrate trans	100.0
TIGR03211	303	catechol_2_3 catechol 2,3 dioxygenase. Members of	100.0
TIGR02295	294	HpaD 3,4-dihydroxyphenylacetate 2,3-dioxygenase. T	100.0
TIGR03213	286	23dbph12diox 2,3-dihydroxybiphenyl 1,2-dioxygenase	100.0
TIGR01263	353	4HPPD 4-hydroxyphenylpyruvate dioxygenase. This pr	99.9
COG2514	265	Predicted ring-cleavage extradiol dioxygenase [Gen	99.89
TIGR00068	150	glyox_I lactoylglutathione lyase. Glyoxylase I is	99.86
PLN02367	233	lactoylglutathione lyase	99.86
TIGR00068	150	glyox_I lactoylglutathione lyase. Glyoxylase I is	99.85
PLN02875	398	4-hydroxyphenylpyruvate dioxygenase	99.85
PRK10291	129	glyoxalase I; Provisional	99.84
PLN02367	233	lactoylglutathione lyase	99.84
PLN03042	185	Lactoylglutathione lyase; Provisional	99.84
PRK10291	129	glyoxalase I; Provisional	99.83
PLN03042	185	Lactoylglutathione lyase; Provisional	99.8
cd08358	127	Glo_EDI_BRP_like_21 This conserved domain belongs	99.8
cd08353	142	Glo_EDI_BRP_like_7 This conserved domain belongs t	99.79
cd08342	136	HPPD_N_like N-terminal domain of 4-hydroxyphenylpy	99.79
PRK11478	129	putative lyase; Provisional	99.79
cd07233	121	Glyoxalase_I Glyoxalase I catalyzes the isomerizat	99.78
cd08358	127	Glo_EDI_BRP_like_21 This conserved domain belongs	99.78
PLN02300	286	lactoylglutathione lyase	99.78
cd07233	121	Glyoxalase_I Glyoxalase I catalyzes the isomerizat	99.78
KOG0638	381	consensus 4-hydroxyphenylpyruvate dioxygenase [Ami	99.78
cd08342	136	HPPD_N_like N-terminal domain of 4-hydroxyphenylpy	99.77
cd07243	143	2_3_CTD_C C-terminal domain of catechol 2,3-dioxyg	99.77
cd08353	142	Glo_EDI_BRP_like_7 This conserved domain belongs t	99.77
cd08360	134	MhqB_like_C C-terminal domain of Burkholderia sp.	99.77
cd07257	153	THT_oxygenase_C The C-terminal domain of 2,4,5-Tri	99.76
PRK04101	139	fosfomycin resistance protein FosB; Provisional	99.75
cd07241	125	Glo_EDI_BRP_like_3 This conserved domain belongs t	99.75
cd07243	143	2_3_CTD_C C-terminal domain of catechol 2,3-dioxyg	99.75
cd08352	125	Glo_EDI_BRP_like_1 This conserved domain belongs t	99.75
cd07257	153	THT_oxygenase_C The C-terminal domain of 2,4,5-Tri	99.74
TIGR03645	162	glyox_marine lactoylglutathione lyase family prote	99.74
cd08360	134	MhqB_like_C C-terminal domain of Burkholderia sp.	99.74
PRK11478	129	putative lyase; Provisional	99.74
cd07265	122	2_3_CTD_N N-terminal domain of catechol 2,3-dioxyg	99.73
TIGR03645	162	glyox_marine lactoylglutathione lyase family prote	99.73
cd07241	125	Glo_EDI_BRP_like_3 This conserved domain belongs t	99.73
cd07258	141	PpCmtC_C C-terminal domain of 2,3-dihydroxy-p-cuma	99.72
cd07265	122	2_3_CTD_N N-terminal domain of catechol 2,3-dioxyg	99.72
cd07256	161	HPCD_C_class_II C-terminal domain of 3,4-dihydroxy	99.72
TIGR03081	128	metmalonyl_epim methylmalonyl-CoA epimerase. Membe	99.71
cd08352	125	Glo_EDI_BRP_like_1 This conserved domain belongs t	99.71
cd07237	154	BphC1-RGP6_C_like C-terminal domain of 2,3-dihydro	99.71
cd09014	166	BphC-JF8_C_like C-terminal, catalytic, domain of B	99.71
cd07247	114	SgaA_N_like N-terminal domain of Streptomyces gris	99.7
PF00903	128	Glyoxalase: Glyoxalase/Bleomycin resistance protei	99.7
cd07237	154	BphC1-RGP6_C_like C-terminal domain of 2,3-dihydro	99.7
TIGR03081	128	metmalonyl_epim methylmalonyl-CoA epimerase. Membe	99.7
cd08364	131	FosX FosX, a fosfomycin resistance protein, cataly	99.7
cd07253	125	Glo_EDI_BRP_like_2 This conserved domain belongs t	99.7
cd09013	121	BphC-JF8_N_like N-terminal, non-catalytic, domain	99.69
cd08361	124	PpCmtC_N N-terminal domain of 2,3-dihydroxy-p-cuma	99.69
cd09011	120	Glo_EDI_BRP_like_23 This conserved domain belongs	99.69
cd08347	157	PcpA_C_like C-terminal domain of Sphingobium chlor	99.69
cd07247	114	SgaA_N_like N-terminal domain of Streptomyces gris	99.69
cd08363	131	FosB FosB, a fosfomycin resistance protein, cataly	99.69
PRK04101	139	fosfomycin resistance protein FosB; Provisional	99.68
cd08343	131	ED_TypeI_classII_C C-terminal domain of type I, cl	99.68
cd07239	144	BphC5-RK37_C_like C-terminal, catalytic, domain of	99.68
cd07266	121	HPCD_N_class_II N-terminal domain of 3,4-dihydroxy	99.68
PF00903	128	Glyoxalase: Glyoxalase/Bleomycin resistance protei	99.68
cd07256	161	HPCD_C_class_II C-terminal domain of 3,4-dihydroxy	99.67
cd07263	119	Glo_EDI_BRP_like_16 This conserved domain belongs	99.67
cd07263	119	Glo_EDI_BRP_like_16 This conserved domain belongs	99.67
cd08343	131	ED_TypeI_classII_C C-terminal domain of type I, cl	99.67
cd08347	157	PcpA_C_like C-terminal domain of Sphingobium chlor	99.67
cd09014	166	BphC-JF8_C_like C-terminal, catalytic, domain of B	99.67
cd07239	144	BphC5-RK37_C_like C-terminal, catalytic, domain of	99.67
cd07264	125	Glo_EDI_BRP_like_15 This conserved domain belongs	99.67
cd07249	128	MMCE Methylmalonyl-CoA epimerase (MMCE). MMCE, als	99.66
cd08363	131	FosB FosB, a fosfomycin resistance protein, cataly	99.66
cd07255	125	Glo_EDI_BRP_like_12 This conserved domain belongs	99.66
cd08355	122	Glo_EDI_BRP_like_14 This conserved domain belongs	99.66
cd07249	128	MMCE Methylmalonyl-CoA epimerase (MMCE). MMCE, als	99.66
PRK06724	128	hypothetical protein; Provisional	99.66
cd08355	122	Glo_EDI_BRP_like_14 This conserved domain belongs	99.66
cd07240	117	ED_TypeI_classII_N N-terminal domain of type I, cl	99.66
cd08351	123	ChaP_like ChaP, an enzyme involved in the biosynth	99.66
PRK06724	128	hypothetical protein; Provisional	99.66
cd08361	124	PpCmtC_N N-terminal domain of 2,3-dihydroxy-p-cuma	99.66
cd07246	122	Glo_EDI_BRP_like_8 This conserved domain belongs t	99.66
cd08346	126	PcpA_N_like N-terminal domain of Sphingobium chlor	99.65
cd07252	120	BphC1-RGP6_N_like N-terminal domain of 2,3-dihydro	99.65
cd07258	141	PpCmtC_C C-terminal domain of 2,3-dihydroxy-p-cuma	99.65
cd09013	121	BphC-JF8_N_like N-terminal, non-catalytic, domain	99.65
cd07242	128	Glo_EDI_BRP_like_6 This conserved domain belongs t	99.65
cd07253	125	Glo_EDI_BRP_like_2 This conserved domain belongs t	99.65
cd07267	113	THT_Oxygenase_N N-terminal domain of 2,4,5-trihydr	99.65
cd07245	114	Glo_EDI_BRP_like_9 This conserved domain belongs t	99.65
cd07266	121	HPCD_N_class_II N-terminal domain of 3,4-dihydroxy	99.65
cd09011	120	Glo_EDI_BRP_like_23 This conserved domain belongs	99.64
cd08346	126	PcpA_N_like N-terminal domain of Sphingobium chlor	99.64
cd07242	128	Glo_EDI_BRP_like_6 This conserved domain belongs t	99.64
COG3185	363	4-hydroxyphenylpyruvate dioxygenase and related he	99.64
cd07264	125	Glo_EDI_BRP_like_15 This conserved domain belongs	99.64
cd08359	119	Glo_EDI_BRP_like_22 This conserved domain belongs	99.64
cd07252	120	BphC1-RGP6_N_like N-terminal domain of 2,3-dihydro	99.63
cd08362	120	BphC5-RrK37_N_like N-terminal, non-catalytic, doma	99.63
cd07246	122	Glo_EDI_BRP_like_8 This conserved domain belongs t	99.63
cd08348	134	BphC2-C3-RGP6_C_like The single-domain 2,3-dihydro	99.62
cd07245	114	Glo_EDI_BRP_like_9 This conserved domain belongs t	99.62
cd08351	123	ChaP_like ChaP, an enzyme involved in the biosynth	99.62
cd07255	125	Glo_EDI_BRP_like_12 This conserved domain belongs	99.62
cd08364	131	FosX FosX, a fosfomycin resistance protein, cataly	99.62
PF12681	108	Glyoxalase_2: Glyoxalase-like domain; PDB: 3G12_B	99.62
cd08348	134	BphC2-C3-RGP6_C_like The single-domain 2,3-dihydro	99.61
TIGR03211	303	catechol_2_3 catechol 2,3 dioxygenase. Members of	99.61
cd07238	112	Glo_EDI_BRP_like_5 This conserved domain belongs t	99.61
cd08359	119	Glo_EDI_BRP_like_22 This conserved domain belongs	99.6
cd07238	112	Glo_EDI_BRP_like_5 This conserved domain belongs t	99.6
cd07240	117	ED_TypeI_classII_N N-terminal domain of type I, cl	99.6
cd07244	121	FosA FosA, a Fosfomycin resistance protein, cataly	99.6
PF12681	108	Glyoxalase_2: Glyoxalase-like domain; PDB: 3G12_B	99.59
cd08345	113	Fosfomycin_RP Fosfomycin resistant protein; inhibi	99.59
cd08362	120	BphC5-RrK37_N_like N-terminal, non-catalytic, doma	99.59
cd07235	122	MRD Mitomycin C resistance protein (MRD). Mitomyci	99.58
cd07262	123	Glo_EDI_BRP_like_19 This conserved domain belongs	99.58
cd08349	112	BLMA_like Bleomycin binding protein (BLMA) and sim	99.58
cd07267	113	THT_Oxygenase_N N-terminal domain of 2,4,5-trihydr	99.58
cd08354	122	Glo_EDI_BRP_like_13 This conserved domain belongs	99.58
TIGR02295	294	HpaD 3,4-dihydroxyphenylacetate 2,3-dioxygenase. T	99.58
cd08349	112	BLMA_like Bleomycin binding protein (BLMA) and sim	99.58
cd08345	113	Fosfomycin_RP Fosfomycin resistant protein; inhibi	99.57
cd07261	114	Glo_EDI_BRP_like_11 This conserved domain belongs	99.57
cd07262	123	Glo_EDI_BRP_like_19 This conserved domain belongs	99.57
cd08354	122	Glo_EDI_BRP_like_13 This conserved domain belongs	99.57
KOG2944	170	consensus Glyoxalase [Carbohydrate transport and m	99.57
KOG2943	299	consensus Predicted glyoxalase [Carbohydrate trans	99.56
cd07254	120	Glo_EDI_BRP_like_20 This conserved domain belongs	99.56
COG3324	127	Predicted enzyme related to lactoylglutathione lya	99.56
cd06587	112	Glo_EDI_BRP_like This domain superfamily is found	99.56
cd08344	112	MhqB_like_N N-terminal domain of MhqB, a type I ex	99.56
cd07244	121	FosA FosA, a Fosfomycin resistance protein, cataly	99.56
COG3324	127	Predicted enzyme related to lactoylglutathione lya	99.55
KOG2944	170	consensus Glyoxalase [Carbohydrate transport and m	99.55
cd09012	124	Glo_EDI_BRP_like_24 This conserved domain belongs	99.54
cd09012	124	Glo_EDI_BRP_like_24 This conserved domain belongs	99.54
cd07254	120	Glo_EDI_BRP_like_20 This conserved domain belongs	99.54
cd08350	120	BLMT_like BLMT, a bleomycin resistance protein enc	99.54
cd08357	125	Glo_EDI_BRP_like_18 This conserved domain belongs	99.54
cd07235	122	MRD Mitomycin C resistance protein (MRD). Mitomyci	99.54
cd08350	120	BLMT_like BLMT, a bleomycin resistance protein enc	99.54
TIGR03213	286	23dbph12diox 2,3-dihydroxybiphenyl 1,2-dioxygenase	99.54
cd08344	112	MhqB_like_N N-terminal domain of MhqB, a type I ex	99.53
cd07261	114	Glo_EDI_BRP_like_11 This conserved domain belongs	99.53
cd06587	112	Glo_EDI_BRP_like This domain superfamily is found	99.52
PF13669	109	Glyoxalase_4: Glyoxalase/Bleomycin resistance prot	99.52
cd08357	125	Glo_EDI_BRP_like_18 This conserved domain belongs	99.52
cd08356	113	Glo_EDI_BRP_like_17 This conserved domain belongs	99.49
cd08356	113	Glo_EDI_BRP_like_17 This conserved domain belongs	99.47
cd07251	121	Glo_EDI_BRP_like_10 This conserved domain belongs	99.45
PF13669	109	Glyoxalase_4: Glyoxalase/Bleomycin resistance prot	99.44
cd07251	121	Glo_EDI_BRP_like_10 This conserved domain belongs	99.44
cd07250	191	HPPD_C_like C-terminal domain of 4-hydroxyphenylpy	99.32
COG2514	265	Predicted ring-cleavage extradiol dioxygenase [Gen	99.3
cd07250	191	HPPD_C_like C-terminal domain of 4-hydroxyphenylpy	99.18
TIGR01263	353	4HPPD 4-hydroxyphenylpyruvate dioxygenase. This pr	99.16
COG2764	136	PhnB Uncharacterized protein conserved in bacteria	99.07
cd06588	128	PhnB_like Escherichia coli PhnB and similar protei	99.06
cd06588	128	PhnB_like Escherichia coli PhnB and similar protei	99.05
PF13468	175	Glyoxalase_3: Glyoxalase-like domain; PDB: 3P8A_B.	99.02
COG3565	138	Predicted dioxygenase of extradiol dioxygenase fam	98.98
COG2764	136	PhnB Uncharacterized protein conserved in bacteria	98.98
PF14506	125	CppA_N: CppA N-terminal; PDB: 3E0R_D.	98.97
COG3607	133	Predicted lactoylglutathione lyase [General functi	98.96
COG0346	138	GloA Lactoylglutathione lyase and related lyases [	98.96
COG3607	133	Predicted lactoylglutathione lyase [General functi	98.95
COG3565	138	Predicted dioxygenase of extradiol dioxygenase fam	98.94
COG0346	138	GloA Lactoylglutathione lyase and related lyases [	98.92
PLN02875	398	4-hydroxyphenylpyruvate dioxygenase	98.88
PF14696	139	Glyoxalase_5: Hydroxyphenylpyruvate dioxygenase, H	98.73
PRK01037	357	trmD tRNA (guanine-N(1)-)-methyltransferase/unknow	98.64
PRK01037	357	trmD tRNA (guanine-N(1)-)-methyltransferase/unknow	98.6
PRK10148	147	hypothetical protein; Provisional	98.46
PRK10148	147	hypothetical protein; Provisional	98.42
COG3185	363	4-hydroxyphenylpyruvate dioxygenase and related he	98.35
KOG0638	381	consensus 4-hydroxyphenylpyruvate dioxygenase [Ami	98.26
PF14506	125	CppA_N: CppA N-terminal; PDB: 3E0R_D.	98.18
PF14696	139	Glyoxalase_5: Hydroxyphenylpyruvate dioxygenase, H	97.98
PF13468	175	Glyoxalase_3: Glyoxalase-like domain; PDB: 3P8A_B.	97.76
PF15067	236	FAM124: FAM124 family	96.77
PF14507	101	CppA_C: CppA C-terminal; PDB: 3E0R_D.	96.57
PF06983	116	3-dmu-9_3-mt: 3-demethylubiquinone-9 3-methyltrans	96.49
PF06983	116	3-dmu-9_3-mt: 3-demethylubiquinone-9 3-methyltrans	96.13
PF15067	236	FAM124: FAM124 family	95.74
PF14507	101	CppA_C: CppA C-terminal; PDB: 3E0R_D.	95.31

>PLN02300 lactoylglutathione lyase

Probab=100.00  E-value=1e-45  Score=313.72  Aligned_cols=284  Identities=76%  Similarity=1.267  Sum_probs=233.6

Q ss_pred             CCCCCCCCchhhccCCcCCccceeeEEEEeCCHHHHHHHHHHhcCCEEEEEeccCCCceeeEEeeccCCCcceEEEeeec
Q 022831            2 AEASPAVANAELLEWPKKDKRRLLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYN   81 (291)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~~~~i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~   81 (291)
                      |+||-+.+.+.+.+|+.|++.+|.|+.|.|+|++++++||+++|||++..+...++..+...++..++....+.+++...
T Consensus         3 ~~~~~~~~~~~~~~~~~~~i~~l~Hv~l~V~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~   82 (286)
T PLN02300          3 AAASTAAEAEDLLEWPKKDKRRMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSNFVVELTYN   82 (286)
T ss_pred             cccccChhhhhhhcCCccccceEEEEEEEeCCHHHHHHHHHHhcCCEEEEeeecCCCcEEEEEEccCCCCCceEEEEecc
Confidence            67888999999999999999999999999999999999999999999987655555555567776655455667777654


Q ss_pred             CCCCcccCCCCceEEEEEECCHHHHHHHHHHcCCeeeeCCccCCCCceEEEEEECCCCcEEEEEecCCCCCCceeeeeee
Q 022831           82 YGVTSYDIGTGFGHLAIATEDVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFELIQRGPTPEPLCQVMLRV  161 (291)
Q Consensus        82 ~~~~~~~~g~~~~~i~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dP~G~~iel~~~~~~~~~~~hv~l~v  161 (291)
                      .+......+.++.|++|.|+|+++++++|.++|+++...+...+++...++|++||+|+.|||++....+.++.|+.|.|
T Consensus        83 ~~~~~~~~~~g~~hia~~v~dvd~~~~~l~~~G~~i~~~~~~~~~g~~~~~~~~DPdG~~iEl~~~~~~~~~~~~~~l~~  162 (286)
T PLN02300         83 YGVDKYDIGTGFGHFGIAVEDVAKTVELVKAKGGKVTREPGPVKGGKSVIAFVKDPDGYKFELIQRGPTPEPLCQVMLRV  162 (286)
T ss_pred             CCCCccccCCCccEEEEEeCCHHHHHHHHHHCCCeeecCCcccCCCceEEEEEECCCCCEEEEEeCCCCCCcceeEEEEe
Confidence            44334445668899999999999999999999999888877776655556889999999999999998899999999999


Q ss_pred             CCchhhHHHHHHhcCCeeeeeccCcccceeeeeeccCCCCcceEEEEeEecCceeeccCceeeEEEEEecChHHHHHHHH
Q 022831          162 GDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAISTDDVYKSAEVVN  241 (291)
Q Consensus       162 ~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~~hia~~v~di~~~~~~l~  241 (291)
                      +|++++.+||+++|||+.......++..|...++...+......+++....+...+..+++.+|++|.|+|++++++++ 
T Consensus       163 ~d~~~a~~Fy~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~~~~~g~~~~~i~~~v~di~~~~~~~-  241 (286)
T PLN02300        163 GDLDRSIKFYEKAFGMKLLRKRDNPEYKYTIAMMGYGPEDKTTVLELTYNYGVTEYTKGNAYAQIAIGTDDVYKTAEAI-  241 (286)
T ss_pred             CCHHHHHHHHHhccCCEEEeeecccccceEEEEEecCCCCCccEEEEeecCCCCccccCCceeEEEEecCCHHHHHHHH-
Confidence            9999999999999999987654444555766666543322334566655443333445789999999999999999999 


Q ss_pred             HHHHhhCCeeeecccccCCCCceEEEEECCCCCeEEEEechhhhhhhh
Q 022831          242 LVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNEDFLKELQ  289 (291)
Q Consensus       242 ~~~~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~~~~~~~~  289 (291)
                         +++|+++..+|...|+.+.++++|+||||+.|+|+++++++++|+
T Consensus       242 ---~~~G~~v~~~p~~~p~~~~~~~~~~DPdG~~i~~~~~~~~~~~~~  286 (286)
T PLN02300        242 ---KLVGGKITREPGPLPGINTKITACLDPDGWKTVFVDNIDFLKELE  286 (286)
T ss_pred             ---HHcCCeEecCCccCCCCceEEEEEECCCCCEEEEEccchhhhhcC
Confidence               999999999998888755688999999999999999999999984

>KOG2943 consensus Predicted glyoxalase [Carbohydrate transport and metabolism]

Probab=100.00  E-value=1.2e-33  Score=218.99  Aligned_cols=259  Identities=46%  Similarity=0.805  Sum_probs=218.0

Q ss_pred             hhccCCcCCccceeeEEEEeCCHHHHHHHHHHhcCCEEEEEeccCC-----------CceeeEEeeccCCCcceEEEeee
Q 022831           12 ELLEWPKKDKRRLLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPE-----------EKYSNAFLGFGPEQSYFVVELTY   80 (291)
Q Consensus        12 ~~~~~~~~~~~~i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~l~l~~   80 (291)
                      .+..|.+.+-.+.-|+.+.|.|.+++++||+++|||++...++.++           +.|.-.++++|+..++|+++|+.
T Consensus         6 d~~~~~~~~~~r~LH~VfkVgdr~kti~Fyt~vlgMkvLRheef~egc~aacngpyd~kwSktmvGyGpEdshFViELTY   85 (299)
T KOG2943|consen    6 DLLCWMKADTRRALHYVFKVGDRAKTIDFYTEVLGMKVLRHEEFEEGCEAACNGPYDGKWSKTMVGYGPEDSHFVIELTY   85 (299)
T ss_pred             hhhhhhhccchheeeEeEeecchHHHHHHHHHhhcceeeehhhhhhhhhhhcCCCcccchhhhheecCCCcccEEEEEEe
Confidence            6778888889999999999999999999999999999998888777           67778889999999999999999


Q ss_pred             cCCCCcccCCCCceEEEEEECCHHHHHHHHHHcCCeeeeCCccCCCCceEEEEEECCCCcEEEEEecCCCCCCceeeeee
Q 022831           81 NYGVTSYDIGTGFGHLAIATEDVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFELIQRGPTPEPLCQVMLR  160 (291)
Q Consensus        81 ~~~~~~~~~g~~~~~i~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dP~G~~iel~~~~~~~~~~~hv~l~  160 (291)
                      +++...+..|+++.||.+.++|+-...+.+..-|.+        ..| ...+++.||||+.++|++..+.+.++..|+|+
T Consensus        86 NYgV~~YelGndfg~i~I~s~dv~~~ve~v~~p~~~--------~~g-~~~~~v~dPdGykF~l~~~~p~s~pv~~V~l~  156 (299)
T KOG2943|consen   86 NYGVSKYELGNDFGGITIASDDVFSKVEKVNAPGGK--------GSG-CGIAFVKDPDGYKFYLIDRGPQSDPVLQVMLN  156 (299)
T ss_pred             ccCccceeccCCcccEEEeHHHHHHHHHHhcCcCCc--------ccc-eEEEEEECCCCcEEEEeccCCCCCCeEEEEEE
Confidence            999999999999999999999987776666655532        122 33478999999999999988999999999999


Q ss_pred             eCCchhhHHHHHHhcCCeeeeeccCcccceeeeeeccCCCCcceEEEEeEecCceeeccCceeeEEEEEecChHHHHHHH
Q 022831          161 VGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAISTDDVYKSAEVV  240 (291)
Q Consensus       161 v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~~hia~~v~di~~~~~~l  240 (291)
                      |.|+++++.||.+.|||++.+.    +..++..++++++.  ...|||+.+.+...+..+.|...+++..+++..+.+.+
T Consensus       157 VgdL~ks~kyw~~~lgM~ilek----eek~t~~~mgYgd~--q~~LElt~~~~~id~~kg~griafaip~d~~~~l~e~i  230 (299)
T KOG2943|consen  157 VGDLQKSIKYWEKLLGMKILEK----EEKYTRARMGYGDE--QCVLELTYNYDVIDRAKGFGRIAFAIPTDDLPKLQEAI  230 (299)
T ss_pred             ehhHHHHHHHHHHHhCcchhhh----hhhhhhhhhccCCc--ceEEEEEeccCcccccccceeEEEeccccccccHHHHH
Confidence            9999999999999999998764    23356677777644  58999999888877777788888888888999998888


Q ss_pred             HHHHHhhCCeeeecccccCCCC---ceEEEEECCCCCeEEEEechhhhhhhh
Q 022831          241 NLVTQELGGKITRQPGPIPGLN---TKITSFVDPDGWKTVLVDNEDFLKELQ  289 (291)
Q Consensus       241 ~~~~~~~G~~~~~~p~~~~~~~---~~~~~~~DPdG~~iel~~~~~~~~~~~  289 (291)
                          +..+.++..+..+.++.+   ..++.+.||||+.|+++.++++++.++
T Consensus       231 ----K~~n~~i~~~lttl~tPgka~vqvvil~DPDgheicfVdde~F~~lsk  278 (299)
T KOG2943|consen  231 ----KSANGTILTPLTTLDTPGKATVQVVILADPDGHEICFVDDEGFRKLSK  278 (299)
T ss_pred             ----HHhccccccceeeccCCCcceeEEEEEECCCCceEEEeccHHHHHHhc
Confidence                888777766655433322   245668999999999999999998764

>TIGR03211 catechol_2_3 catechol 2,3 dioxygenase

Probab=100.00  E-value=3.1e-32  Score=233.68  Aligned_cols=236  Identities=22%  Similarity=0.240  Sum_probs=165.6

Q ss_pred             ccceeeEEEEeCCHHHHHHHHHHhcCCEEEEEeccCCCceeeEEeeccCCCcceEEEeeecCCCCcccCCCCceEEEEEE
Q 022831           21 KRRLLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHLAIAT  100 (291)
Q Consensus        21 ~~~i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~g~~~~~i~~~v  100 (291)
                      +++|+|+.|.|+|++++++||+++|||++..+...      .+++..........+.+...       ...++.|++|.|
T Consensus         2 i~~i~Hi~l~V~Dle~s~~FY~~~LG~~~~~~~~~------~~~~~~~~~~~~~~~~l~~~-------~~~g~~hiaf~v   68 (303)
T TIGR03211         2 VMRLGHVELRVLDLEESLKHYTDVLGLEETGRDGQ------RVYLKAWDEWDHYSVILTEA-------DTAGLDHMAFKV   68 (303)
T ss_pred             cceeeEEEEEeCCHHHHHHHHHHhcCCEEeeecCc------eEEEEeccccccceEeeccC-------CCCceeEEEEEe
Confidence            67899999999999999999999999998764321      23333211112223333321       123788999999


Q ss_pred             C---CHHHHHHHHHHcCCeeeeCCccCCCCceEEEEEECCCCcEEEEEecCCC---------------------CCCcee
Q 022831          101 E---DVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFELIQRGPT---------------------PEPLCQ  156 (291)
Q Consensus       101 ~---d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dP~G~~iel~~~~~~---------------------~~~~~h  156 (291)
                      +   |+++++++|.++|+++...+.....+....+||+||+|+.|||.+....                     ..+|+|
T Consensus        69 ~~~~dl~~~~~~l~~~G~~~~~~~~~~~~~~g~~~~~~DPdG~~iEl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~H  148 (303)
T TIGR03211        69 ESEADLERLVKRLEAYGVGTGWIPAGELPGVGRRVRFTLPSGHTMELYAEKEYVGELVGGLNPDPWPDPLRGVGARRLDH  148 (303)
T ss_pred             CCHHHHHHHHHHHHHcCCCeeeccCCCCCCcceEEEEECCCCCEEEEEEccccccccccccCCcccccccCCcCceeEEE
Confidence            7   7899999999999998755432222222358899999999999985421                     235899


Q ss_pred             eeeeeCCchhhHHHHHHhcCCeeeeeccCcccce-eeeeeccCCCCcceEEEEeEecCceeeccCce-eeEEEEEecChH
Q 022831          157 VMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKC-ALAMLGYAEEDQTTVLELAYSYGVTEYTKGNA-YAQVAISTDDVY  234 (291)
Q Consensus       157 v~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g-~~hia~~v~di~  234 (291)
                      |.|.|+|++++.+||+++|||+...+...+++.. ...++..+..  ...+.+...       .+.| ++|+||.|+|++
T Consensus       149 i~l~V~Dl~~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~-------~~~g~~~Hiaf~v~~~~  219 (303)
T TIGR03211       149 CLLYGEDVAENTRFFTEVLGFRLTEQVVLGDGKEQAAAWLSVSNK--AHDIAFVGD-------PEPGKLHHVSFFLDSWE  219 (303)
T ss_pred             EeEEeCCHHHHHHHHHHhcCCEEEeeEEcCCCcEEEEEEEEcCCC--CcccceecC-------CCCCceEEEEEEcCCHH
Confidence            9999999999999999999999876543333221 2334432221  122222210       1234 899999999755


Q ss_pred             H---HHHHHHHHHHhhCCeeeecccccCCCCceEEEEECCCCCeEEEEech
Q 022831          235 K---SAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNE  282 (291)
Q Consensus       235 ~---~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~  282 (291)
                      +   ++++|    +++|+++..+|.++.....+++||+|||||.|||+...
T Consensus       220 ~v~~~~~~l----~~~G~~~~~~p~~~~~~~~~~~y~~DPdG~~iEl~~~~  266 (303)
T TIGR03211       220 DVLKAADVM----SKNDVSIDIGPTRHGITRGQTIYFFDPSGNRNETFGGG  266 (303)
T ss_pred             HHHHHHHHH----HhCCCceeeCCcccCCCCceEEEEECCCCCEEEEecCC
Confidence            5   55666    99999998888776654567899999999999998543

Members of this family all are enzymes active as catechol 2,3 dioxygenase (1.13.11.2), although some members have highly significant activity on catechol derivatives such as 3-methylcatechol, 3-chlorocatechol, and 4-chlorocatechol (see Mars, et al.). This enzyme is also called metapyrocatechase, as it performs a meta-cleavage (an extradiol ring cleavage), in contrast to the ortho-cleavage (intradiol ring cleavage)performed by catechol 1,2-dioxygenase (EC 1.13.11.1), also called pyrocatechase.

>TIGR02295 HpaD 3,4-dihydroxyphenylacetate 2,3-dioxygenase

Probab=100.00  E-value=7.1e-32  Score=230.62  Aligned_cols=234  Identities=23%  Similarity=0.287  Sum_probs=166.4

Q ss_pred             CccceeeEEEEeCCHHHHHHHHHHhcCCEEEEEeccCCCceeeEEeeccCCCcceEEEeeecCCCCcccCCCCceEEEEE
Q 022831           20 DKRRLLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHLAIA   99 (291)
Q Consensus        20 ~~~~i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~g~~~~~i~~~   99 (291)
                      +|.+|+||.|.|+|++++++||+++|||++..+..  .    ..++..........+.+...       ...+..|++|.
T Consensus         1 ~i~~i~hv~l~v~Dl~~s~~FY~~vLGl~~~~~~~--~----~~~~~~~~~~~~~~l~l~~~-------~~~~~~hiaf~   67 (294)
T TIGR02295         1 NILRTGHVELRVTDLDKSREFYVDLLGFRETESDK--E----YIYLRGIEEFQHHSLVLTKA-------PSAALSYIGFR   67 (294)
T ss_pred             CCceeeEEEEEeCCHHHHHHHHHHccCCEEEEecC--C----eEEEeccCcCCceEEEeeeC-------CCcCccEEEEE
Confidence            47899999999999999999999999999876422  1    34443211111223333321       12367899999


Q ss_pred             EC---CHHHHHHHHHHcCCeeeeCCccCCCCceEEEEEECCCCcEEEEEecCC---------------CCCCceeeeeee
Q 022831          100 TE---DVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFELIQRGP---------------TPEPLCQVMLRV  161 (291)
Q Consensus       100 v~---d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dP~G~~iel~~~~~---------------~~~~~~hv~l~v  161 (291)
                      |+   |+++++++|+++|+++...+.  +++ ...+||+||+|+.|||+....               .+.+++|+.|.|
T Consensus        68 v~~~~dl~~~~~~l~~~Gv~v~~~~~--~~~-~~~~~~~DPdG~~iEl~~~~~~~~~~~~~~~~~~~~~~~~i~Hv~l~v  144 (294)
T TIGR02295        68 VSKEEDLDKAADFFQKLGHPVRLVRD--GGQ-PEALRVEDPFGYPIEFYFEMEKVERLLRRYHRHRGVSPVRLDHFNVFV  144 (294)
T ss_pred             eCCHHHHHHHHHHHHhcCCcEEeecC--CCC-ceEEEEECCCCCEEEEEEchhhcccccccccccCCccceeeeeEEEEe
Confidence            97   789999999999999776433  222 245899999999999987431               134689999999


Q ss_pred             CCchhhHHHHHHhcCCeeeeeccCcccceeeeeeccCCCCcceEEEEeEecCceeeccCceeeEEEEEecChHH---HHH
Q 022831          162 GDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAISTDDVYK---SAE  238 (291)
Q Consensus       162 ~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~~hia~~v~di~~---~~~  238 (291)
                      +|++++.+||+++|||++..+...+.+.....++.....  ++.+.+..       ..+++++|+||.|+|.++   +++
T Consensus       145 ~dl~~a~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~-------~~~~~~~Hiaf~v~d~~~v~~~~~  215 (294)
T TIGR02295       145 PDVQRALRFYKEELGFRVTEYTEDDEGNLAAAWLHRKGG--VHDIALTN-------GNGPRLHHIAYWVHDPLNIIKACD  215 (294)
T ss_pred             CCHHHHHHHHHHhcCCEEEEEeccCCCcEEEEEEecCCC--cCceEeec-------CCCCceeeEEEEcCCHHHHHHHHH
Confidence            999999999999999998766433333333344432221  22333321       124689999999999554   456


Q ss_pred             HHHHHHHhhCCe--eeecccccCCCCceEEEEECCCCCeEEEEech
Q 022831          239 VVNLVTQELGGK--ITRQPGPIPGLNTKITSFVDPDGWKTVLVDNE  282 (291)
Q Consensus       239 ~l~~~~~~~G~~--~~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~  282 (291)
                      +|    +++|++  +..+|+++..++..++|++||+||.|||+...
T Consensus       216 ~l----~~~G~~~~~~~~p~~~~~~~~~~~y~~DP~G~~iEl~~~~  257 (294)
T TIGR02295       216 IL----ASAGLSDSIERGPGRHGVSNAFFLYLRDPDGHRIELYTGD  257 (294)
T ss_pred             HH----HhCCCCcccccCCccCCCCcceEEEEECCCCCEEEEEecc
Confidence            66    999988  66777766554557899999999999998854

The enzyme from Bacillus brevis contains manganese.

>TIGR03213 23dbph12diox 2,3-dihydroxybiphenyl 1,2-dioxygenase

Probab=100.00  E-value=2.2e-31  Score=226.54  Aligned_cols=234  Identities=18%  Similarity=0.217  Sum_probs=166.4

Q ss_pred             ccceeeEEEEeCCHHHHHHHHHHhcCCEEEEEeccCCCceeeEEeeccCCCcceEEEeeecCCCCcccCCCCceEEEEEE
Q 022831           21 KRRLLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHLAIAT  100 (291)
Q Consensus        21 ~~~i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~g~~~~~i~~~v  100 (291)
                      |.+|.|+.|.|+|++++++||+++|||++.....  ++   ..|+..+..  ...+.+....       ..+..+++|.|
T Consensus         1 ~~~i~~v~l~V~Dl~~s~~FY~~~LGl~~~~~~~--~~---~~~~~~~~~--~~~~~l~~~~-------~~~~~~~~f~V   66 (286)
T TIGR03213         1 VRGLGYLGIGVSDVDAWREFATEVLGMMVASEGE--ND---ALYLRLDSR--AHRIAVHPGE-------SDDLAYAGWEV   66 (286)
T ss_pred             CceeeEEEEEeCCHHHHHHHHHhccCcccccCCC--Cc---eEEEEcCCC--ceEEEEEECC-------cCCeeeEeeee
Confidence            5789999999999999999999999998754311  11   335555322  2233333221       12567899999


Q ss_pred             CC---HHHHHHHHHHcCCeeeeCCccC--CCCceEEEEEECCCCcEEEEEecCC--------C----------CCCceee
Q 022831          101 ED---VYKMVENIRAKGGNVTREPGPL--KGMTTHFAFVKDPDGYIFELIQRGP--------T----------PEPLCQV  157 (291)
Q Consensus       101 ~d---~~~~~~~l~~~G~~~~~~~~~~--~~g~~~~~~~~dP~G~~iel~~~~~--------~----------~~~~~hv  157 (291)
                      +|   ++++.++|+++|+++...+...  ..+....++|.||+||.+|++....        .          +.+|.||
T Consensus        67 ~~~~~l~~~~~~L~~~Gv~~~~~~~~~~~~~~~~~~~~f~DPdGn~lEl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Hv  146 (286)
T TIGR03213        67 ADEAGLDQVKEKLEKAGVAVTVASAAEARERGVLGLIKFTDPGGNPLEIYYGAVEDFEKPFVSPRAVSGFVTGDQGLGHI  146 (286)
T ss_pred             CCHHHHHHHHHHHHHcCCceEECCHHHhhhccceEEEEEECCCCCEEEEEEcccccCCCCCCCCCCCCccccCCccccEE
Confidence            98   8899999999999987654321  1122345899999999999986431        1          2368999


Q ss_pred             eeeeCCchhhHHHHHHhcCCeeeeeccC--ccc-ceeeeeeccCCCCcceEEEEeEecCceeeccCceeeEEEEEecChH
Q 022831          158 MLRVGDLGRSIKFYEKALGMKLLRTIDS--PEL-KCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAISTDDVY  234 (291)
Q Consensus       158 ~l~v~D~~~~~~Fy~~~lG~~~~~~~~~--~~~-~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~~hia~~v~di~  234 (291)
                      .|.|+|++++.+||+++|||++......  +++ .+...++..++.  +..+.+...      +..++++|++|.|+|++
T Consensus       147 ~l~v~Dle~s~~FY~~~LGf~~~~~~~~~~~~g~~~~~~~l~~~~~--~~~~~l~~~------~~~~~~~Hiaf~v~d~~  218 (286)
T TIGR03213       147 VLRVPDVDAALAFYTEVLGFQLSDVIDLPAGPGVTVRPYFLHCNER--HHSLAFAAG------PSEKRLNHLMLEVDTLD  218 (286)
T ss_pred             EEEcCCHHHHHHHHHHccCCeEEEeEcccCCCCCcceEEEEEECCC--cceEEEecC------CCCCceEEEEEEcCCHH
Confidence            9999999999999999999998765432  211 122345543322  233444221      12468999999999877


Q ss_pred             H---HHHHHHHHHHhhCCeeeecccccCCCCceEEEEECCCCCeEEEEec
Q 022831          235 K---SAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDN  281 (291)
Q Consensus       235 ~---~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iel~~~  281 (291)
                      +   +++++    +++|+ ....|++++.++.+++|++||+|++||+...
T Consensus       219 ~v~~~~~~l----~~~G~-~~~~~~r~~~~~~~~~y~~DP~G~~iE~~~~  263 (286)
T TIGR03213       219 DVGLALDRV----DADGI-VASTLGRHTNDHMVSFYVATPSGWLVEYGWG  263 (286)
T ss_pred             HHHHHHHHH----HHCCC-EEecCCcCCCCCeEEEEEECCCCcEEEeecC
Confidence            7   56777    99999 6667777766667889999999999999874

Members of this protein family all have activity as 2,3-dihydroxybiphenyl 1,2-dioxygenase, the third enzyme of a pathway for biphenyl degradation. Many of the extradiol ring-cleaving dioxygenases, to which these proteins belong, act on a range of related substrates. Note that some members of this family may be found operons for toluene or naphthalene degradation, where other activities of the same enzyme may be more significant; the trusted cutoff for this model is set relatively high to exclude most such instances.

>TIGR01263 4HPPD 4-hydroxyphenylpyruvate dioxygenase

Probab=99.90  E-value=1.6e-21  Score=170.14  Aligned_cols=223  Identities=21%  Similarity=0.313  Sum_probs=153.1

Q ss_pred             cceeeEEEEeCCHHHHHHHHHHhcCCEEEEEeccCCCceeeEEeeccCCCcceEEEeeecCCCC-c---c--cCCCCceE
Q 022831           22 RRLLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVT-S---Y--DIGTGFGH   95 (291)
Q Consensus        22 ~~i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~-~---~--~~g~~~~~   95 (291)
                      ++++|+.|.|+|++++.+||++.|||++........+. ....+..  +  ...+++..+.... .   +  ..|+++++
T Consensus         1 ~~i~hi~~~V~D~~~a~~~y~~~LGf~~~~~~~~~~~~-~~~~~~~--G--~~~l~L~~~~~~~s~~~~~~~~hg~gv~~   75 (353)
T TIGR01263         1 DGFDFVEFYVGDAKQAAYYYFTRFGFEKVAKETGHREK-ASHVLRQ--G--QINFVLTAPYSSDSPAADFAAKHGDGVKD   75 (353)
T ss_pred             CceEEEEEEeCCHHHHHHHHHHhcCCcEEEEeecCCce-eEEEEEe--C--CEEEEEecCCCCCchHHHHHHhCCCceEE
Confidence            47899999999999999999999999998763222221 2233332  2  2445555432221 1   1  26789999


Q ss_pred             EEEEECCHHHHHHHHHHcCCeeeeCCccCCCCceEEEEEECCCCcEEEEEecCC---------------------C----
Q 022831           96 LAIATEDVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFELIQRGP---------------------T----  150 (291)
Q Consensus        96 i~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dP~G~~iel~~~~~---------------------~----  150 (291)
                      |||.|+|++++++++.++|+++..+|.....|...+.-+..++|..+.|++...                     .    
T Consensus        76 iaf~V~Dv~~a~~~l~~~Ga~~v~~p~~~~~g~~~~~~i~~~g~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  155 (353)
T TIGR01263        76 VAFRVDDAAAAFEAAVERGAEPVQAPVELDEGAVTLATIKGIGDVVHTLVDRGGYKGSFYPGFFESLLDAALHEPPPGVG  155 (353)
T ss_pred             EEEEECCHHHHHHHHHHCCCEeccCCccCCCCeEEEEEEECcCCCEEEEEcCCCCCCCCCCCccccccccccccCCCCCC
Confidence            999999999999999999999887765431122333445666777777665321                     0    


Q ss_pred             CCCceeeeeeeC--CchhhHHHHHHhcCCeeeeeccCcc--cceeeeeeccCCCCcceEEEEeEecCc--e-------ee
Q 022831          151 PEPLCQVMLRVG--DLGRSIKFYEKALGMKLLRTIDSPE--LKCALAMLGYAEEDQTTVLELAYSYGV--T-------EY  217 (291)
Q Consensus       151 ~~~~~hv~l~v~--D~~~~~~Fy~~~lG~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~l~l~~~~~~--~-------~~  217 (291)
                      -.+++|+++.|+  |++++.+||+++|||++....+...  .......+..+  .....|+|..+...  .       ..
T Consensus       156 ~~~iDHv~i~V~~~dl~~~~~fY~~~lGf~~~~~~~~~~~~~~~~s~~~~~~--~g~~~i~L~ep~~~~~~s~i~~fl~~  233 (353)
T TIGR01263       156 LIAIDHLVGNVYRGQMEPWAEFYEKIFGFREIRSFDIKTEYSALNSIVMASP--DGKVKIPLNEPASGKDKSQIEEFLEF  233 (353)
T ss_pred             eEEeeeeEcccCCccHHHHHHHHHHHhCCceeeEEEeccCCccEEEEEEECC--CCcEEEEEeccCCCCCCCHHHHHHHH
Confidence            113999999999  9999999999999999876543211  11221222211  22466777653111  1       12


Q ss_pred             ccCceeeEEEEEecChHHHHHHHHHHHHhhCCeeeecc
Q 022831          218 TKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQP  255 (291)
Q Consensus       218 ~~~~g~~hia~~v~di~~~~~~l~~~~~~~G~~~~~~p  255 (291)
                      ..|.|++||||.|+|++++++++    ++.|+++...|
T Consensus       234 ~~g~Gv~HiAf~vdDi~~~~~~l----~~~Gv~~l~~P  267 (353)
T TIGR01263       234 YNGAGVQHIALNTDDIVRTVRAL----RARGVEFLDTP  267 (353)
T ss_pred             cCCCCccEEEEEcCCHHHHHHHH----HHcCCccCcCC
Confidence            24789999999999999999999    99999998877

This protein oxidizes 4-hydroxyphenylpyruvate, a tyrosine and phenylalanine catabolite, to homogentisate. Homogentisate can undergo a further non-enzymatic oxidation and polymerization into brown pigments that protect some bacterial species from light. A similar process occurs spontaneously in blood and is hemolytic (see PubMed:8000039). In some bacterial species, this enzyme has been studied as a hemolysin.

>COG2514 Predicted ring-cleavage extradiol dioxygenase [General function prediction only]

Probab=99.89  E-value=3.5e-21  Score=154.25  Aligned_cols=196  Identities=20%  Similarity=0.282  Sum_probs=142.8

Q ss_pred             CCccceeeEEEEeCCHHHHHHHHHHhcCCEEEEEeccCCCceeeEEeeccCCCcceEEEeeecCC-CCcccCCCCceEEE
Q 022831           19 KDKRRLLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYG-VTSYDIGTGFGHLA   97 (291)
Q Consensus        19 ~~~~~i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~-~~~~~~g~~~~~i~   97 (291)
                      ..-+.+..|+|.|+|++.+..||+++||+++..+...      .+.++.+..   ..+.|.+... ..+.....|+.|++
T Consensus         6 ~~~~~v~~v~L~vrdL~~~~~FY~~ilGL~v~~~~~~------~v~L~vgg~---~LL~L~q~~~a~~~~~~~aGLyH~A   76 (265)
T COG2514           6 TTPTFVGAVTLNVRDLDSMTSFYQEILGLQVLEETDG------SVTLGVGGT---PLLTLEQFPDARRPPPRAAGLYHTA   76 (265)
T ss_pred             CCCcEEEEEEEEeccHHHHHHHHHHhhCCeeeeccCc------eEEEeeCCE---EEEEEEeCCCCCCCCccccceeeee
Confidence            4567899999999999999999999999999876543      455665432   3455555322 22223455999999


Q ss_pred             EEECC---HHHHHHHHHHcCCeeeeCCccCCCCceEEEEEECCCCcEEEEEecCCC------------------------
Q 022831           98 IATED---VYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFELIQRGPT------------------------  150 (291)
Q Consensus        98 ~~v~d---~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dP~G~~iel~~~~~~------------------------  150 (291)
                      |.+++   +..+..++...|..+.+. .+..  .-..+|+.||+||.||+..+++.                        
T Consensus        77 fLlP~r~~L~~~l~hl~~~~~~l~Ga-~DH~--vSEAlYl~DPEGNGIEiYaDrp~~~W~~~~~~v~m~t~~ld~~~ll~  153 (265)
T COG2514          77 FLLPTREDLARVLNHLAEEGIPLVGA-SDHL--VSEALYLEDPEGNGIEIYADRPRSTWDWQNDQVKMDTEPLDVEALLE  153 (265)
T ss_pred             eecCCHHHHHHHHHHHHhcCCccccc-Ccch--hheeeeecCCCCCeEEEEecCChHHhcccCCeeeecccccCHHHHhh
Confidence            99986   777788999999887622 2222  22358999999999999998642                        


Q ss_pred             ------------CCCceeeeeeeCCchhhHHHHHHhcCCeeeeeccCcccceeeeeeccCCCCcceEEEEeEecCceee-
Q 022831          151 ------------PEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEY-  217 (291)
Q Consensus       151 ------------~~~~~hv~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~-  217 (291)
                                  ...|.||.|.|.|++++.+||.++|||+...+.+      ...|++.++++++.-+..+...+...- 
T Consensus       154 ~~~~~~~~g~p~~t~IGHvHL~v~~l~eA~~fY~~~LG~~~~~~~~------~A~F~a~G~YHHHia~N~W~s~~~~~~~  227 (265)
T COG2514         154 EATKEPWTGLPAGTIIGHVHLKVADLEEAEQFYEDVLGLEVTARGP------SALFLASGDYHHHLAANTWNSRGARPRN  227 (265)
T ss_pred             hccccccccCCCCcEEeEEEEEeCCHHHHHHHHHHhcCCeeeecCC------cceEEecCCcceeEEEeccccCCCCCCC
Confidence                        1238999999999999999999999999887622      346788788877766665554433321 


Q ss_pred             ccCceeeEEEEEecC
Q 022831          218 TKGNAYAQVAISTDD  232 (291)
Q Consensus       218 ~~~~g~~hia~~v~d  232 (291)
                      ....|+..+.+.+++
T Consensus       228 ~~~~GLa~~~i~~~~  242 (265)
T COG2514         228 ANASGLAWLEIHTPD  242 (265)
T ss_pred             CCCCCcceEEEEcCC
Confidence            123478888888877

>TIGR00068 glyox_I lactoylglutathione lyase

Probab=99.86  E-value=4.3e-20  Score=142.07  Aligned_cols=141  Identities=61%  Similarity=1.030  Sum_probs=107.4

Q ss_pred             chhhccCCcCCccceeeEEEEeCCHHHHHHHHHHhcCCEEEEEeccCCCceeeEEeeccCCCcceEEEeeecCCCCcccC
Q 022831           10 NAELLEWPKKDKRRLLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTSYDI   89 (291)
Q Consensus        10 ~~~~~~~~~~~~~~i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~   89 (291)
                      ..++..-++...++|.|+.|.|+|++++.+||+++|||++..+...+...+..++++.+.......+++...........
T Consensus         4 ~~~~~~~~~~~~~~i~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~   83 (150)
T TIGR00068         4 SGDLVADPKTKKRRLLHTMLRVGDLDKSLDFYTEVLGMKLLRKRDFPEMKFSLAFLGYGDETSAAVIELTHNWGTEKYDL   83 (150)
T ss_pred             ccccccCcccCCceEEEEEEEecCHHHHHHHHHHhcCCEEEEEeccCCCceEEEEecCCCCCCccEEEEeecCCCCcccC
Confidence            34566677789999999999999999999999999999997765544444445666654433445566554333233334


Q ss_pred             CCCceEEEEEECCHHHHHHHHHHcCCeeeeCCccCCCCceEEEEEECCCCcEEEEEecCCC
Q 022831           90 GTGFGHLAIATEDVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFELIQRGPT  150 (291)
Q Consensus        90 g~~~~~i~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dP~G~~iel~~~~~~  150 (291)
                      +.+..|++|.|+|+++++++|.++|+++..++...+.+....+|++||+|+.|||++....
T Consensus        84 ~~g~~hi~f~v~dld~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~~~~  144 (150)
T TIGR00068        84 GNGFGHIAIGVDDVYKACERVRALGGNVVREPGPVKGGTTVIAFVEDPDGYKIELIQRKST  144 (150)
T ss_pred             CCceeEEEEecCCHHHHHHHHHHcCCccccCCcccCCCceEEEEEECCCCCEEEEEECCch
Confidence            5578899999999999999999999998877765555555568899999999999987643

Glyoxylase I is a homodimer in many species. In some eukaryotes, including yeasts and plants, the orthologous protein carries a tandem duplication, is twice as long, and hits this model twice.

>PLN02367 lactoylglutathione lyase

Probab=99.86  E-value=1.3e-20  Score=150.83  Aligned_cols=129  Identities=33%  Similarity=0.591  Sum_probs=105.6

Q ss_pred             CCceeeeeeeCCchhhHHHHHHhcCCeeeeeccCcccceeeeeeccCCC---------------CcceEEEEeEecCcee
Q 022831          152 EPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEE---------------DQTTVLELAYSYGVTE  216 (291)
Q Consensus       152 ~~~~hv~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~l~l~~~~~~~~  216 (291)
                      -.+.|++|+|.|++++.+||+++|||++..+.+.++.++.++|++.++.               .....|||..+++...
T Consensus        74 ~~~~HtmlRVkDle~Sl~FYt~vLGm~ll~r~d~pe~~f~lyFL~~~~~~~~p~d~~~r~~~~~~~~~~LELt~n~g~e~  153 (233)
T PLN02367         74 YIMQQTMYRIKDPKASLDFYSRVLGMSLLKRLDFPEMKFSLYFMGYEDTASAPTDPTERTVWTFGQKATIELTHNWGTES  153 (233)
T ss_pred             cEEEEEEEEeCCHHHHHHHHHHhcCCEEeEEEecCCCcEEEEEeecCCccccccccccceeeccCCCCEEEEecCCCCCc
Confidence            4589999999999999999999999999888877777889999864331               1135799988766541


Q ss_pred             ------eccC----ceeeEEEEEecChHHHHHHHHHHHHhhCCeeeecccccCCCCceEEEEECCCCCeEEEEechhhhh
Q 022831          217 ------YTKG----NAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNEDFLK  286 (291)
Q Consensus       217 ------~~~~----~g~~hia~~v~di~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~~~~~  286 (291)
                            +..+    .|++|++|.|+|++++++++    +++|+++...|....+  .+++|++||||++|||++.+.+.+
T Consensus       154 ~~~~~~y~~gn~~p~G~~HIaf~VdDVdaa~erL----~a~Gv~~v~~P~~g~~--~riaFIkDPDGn~IEL~e~~~~~~  227 (233)
T PLN02367        154 DPDFKGYHNGNSEPRGFGHIGITVDDVYKACERF----EELGVEFVKKPNDGKM--KGIAFIKDPDGYWIEIFDLKTIGT  227 (233)
T ss_pred             cccchhcccCCCCCCCceEEEEEcCCHHHHHHHH----HHCCCEEEeCCccCCc--eEEEEEECCCCCEEEEEecccccc
Confidence                  3333    48999999999999999999    9999999987765433  578899999999999999887654

>TIGR00068 glyox_I lactoylglutathione lyase

Probab=99.85  E-value=2.5e-20  Score=143.35  Aligned_cols=138  Identities=44%  Similarity=0.783  Sum_probs=105.9

Q ss_pred             CCCCCceeeeeeeCCchhhHHHHHHhcCCeeeeeccCcccceeeeeeccCCCCcceEEEEeEecCceeeccCceeeEEEE
Q 022831          149 PTPEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAI  228 (291)
Q Consensus       149 ~~~~~~~hv~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~~hia~  228 (291)
                      ....++.|+.|.|+|++++.+||+++|||++......++..+...+++.+.......+++....+..+...+.++.|++|
T Consensus        13 ~~~~~i~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~g~~hi~f   92 (150)
T TIGR00068        13 TKKRRLLHTMLRVGDLDKSLDFYTEVLGMKLLRKRDFPEMKFSLAFLGYGDETSAAVIELTHNWGTEKYDLGNGFGHIAI   92 (150)
T ss_pred             cCCceEEEEEEEecCHHHHHHHHHHhcCCEEEEEeccCCCceEEEEecCCCCCCccEEEEeecCCCCcccCCCceeEEEE
Confidence            34567999999999999999999999999987654444444455566544333344566644333222233468899999


Q ss_pred             EecChHHHHHHHHHHHHhhCCeeeecccccCCCCceEEEEECCCCCeEEEEechhhhhhhhc
Q 022831          229 STDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNEDFLKELQS  290 (291)
Q Consensus       229 ~v~di~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~~~~~~~~~  290 (291)
                      .|+|++++.+++    .++|+++..+|...+..+.+.+||+||||+.|||++..+-.+.||.
T Consensus        93 ~v~dld~~~~~l----~~~G~~~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~~~~~~~~~~  150 (150)
T TIGR00068        93 GVDDVYKACERV----RALGGNVVREPGPVKGGTTVIAFVEDPDGYKIELIQRKSTKDGLGN  150 (150)
T ss_pred             ecCCHHHHHHHH----HHcCCccccCCcccCCCceEEEEEECCCCCEEEEEECCchhhhccC
Confidence            999999999999    9999999888866555445688999999999999999999998873

Glyoxylase I is a homodimer in many species. In some eukaryotes, including yeasts and plants, the orthologous protein carries a tandem duplication, is twice as long, and hits this model twice.

>PLN02875 4-hydroxyphenylpyruvate dioxygenase

Probab=99.85  E-value=2.4e-19  Score=155.24  Aligned_cols=222  Identities=17%  Similarity=0.240  Sum_probs=158.2

Q ss_pred             eeeEEEEeCCHHHHHHHHHHhcCCEEEEEeccCCCc--eeeEEeeccCCCcceEEEeeecCCC-----------------
Q 022831           24 LLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEK--YSNAFLGFGPEQSYFVVELTYNYGV-----------------   84 (291)
Q Consensus        24 i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~l~~~~~~-----------------   84 (291)
                      ++||.+.|.|..++..||+..|||+.+.......+.  +....++  .++..+++  ..+...                 
T Consensus         1 ~dhvef~v~da~~~~~~f~~~~GF~~~a~~~~~tg~~~~~s~~~r--~g~i~fv~--~~~~~~~~~~~~~~~~~~~~~~~   76 (398)
T PLN02875          1 FHHVEFWCGDATNTARRFSWGLGMPLVAKSDLTTGNTTYASYLLR--SGDLVFLF--TAPYSPKIGAGDDDPASTAPHPS   76 (398)
T ss_pred             CeEEEEEcCCHHHHHHHHHHhcCCCeEeecCCCCCCcceEEEEEE--eCCEEEEE--eCCCCCccccccccccccccccc
Confidence            589999999999999999999999998765432222  2233333  33444443  332111                 


Q ss_pred             --Cc------ccCCCCceEEEEEECCHHHHHHHHHHcCCeeeeCCccCCC----CceEEEEEECCCCcEEEEEecCC---
Q 022831           85 --TS------YDIGTGFGHLAIATEDVYKMVENIRAKGGNVTREPGPLKG----MTTHFAFVKDPDGYIFELIQRGP---  149 (291)
Q Consensus        85 --~~------~~~g~~~~~i~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~----g~~~~~~~~dP~G~~iel~~~~~---  149 (291)
                        ..      ..+|++++.|+|+|+|++++++++.++|++...+|.....    |...++-++.++|..+.|++...   
T Consensus        77 ~~~~~a~~~~~~HG~gV~dvaf~V~Da~~a~~~A~~~Ga~~~~~~~~~~d~~~~g~~~~~~I~~~G~~~h~lVdr~~~~~  156 (398)
T PLN02875         77 FSSDAARRFFAKHGLAVRAVGVLVEDAEEAFRTSVAHGARPVLEPTELGDEASGGKAVIAEVELYGDVVLRYVSYKGFDG  156 (398)
T ss_pred             cCcHHHHHHHHHcCCeeeEEEEEECCHHHHHHHHHHCCCeeccCCccccccccCceEEEEEEEccCCcEEEEEccCCCCC
Confidence              00      1377899999999999999999999999998877665432    22344557888888888887421   


Q ss_pred             ----------------C----CCCceeeeeeeCCchhhHHHHHHhcCCeeeeeccCccc-----ceeeeeeccCCCCcce
Q 022831          150 ----------------T----PEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPEL-----KCALAMLGYAEEDQTT  204 (291)
Q Consensus       150 ----------------~----~~~~~hv~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~  204 (291)
                                      .    -.+|+|+++.|++++.+..||+++|||+.....+.++.     +.....+..+  +...
T Consensus       157 ~~f~p~f~~~~~~~~~~~~~gl~~IDHi~iaV~~ld~a~~fY~~vlGf~~~~~~d~~~i~~~~sgl~S~vl~sp--~g~v  234 (398)
T PLN02875        157 AKFLPGYEPVESSSSFPLDYGLRRLDHAVGNVPNLLPAVNYIAGFTGFHEFAEFTAEDVGTVDSGLNSMVLASN--NEMV  234 (398)
T ss_pred             CccCCCcccccccccCCCCCCcceeCcceechhhHHHHHHHHHHhcCCeeeeeeccccccccccceEEEEEEcC--CCcE
Confidence                            0    12599999999999999999999999998765443221     1344444433  2346


Q ss_pred             EEEEeEecC---ce-------eeccCceeeEEEEEecChHHHHHHHHHHHHhh----CCeeeecc
Q 022831          205 VLELAYSYG---VT-------EYTKGNAYAQVAISTDDVYKSAEVVNLVTQEL----GGKITRQP  255 (291)
Q Consensus       205 ~l~l~~~~~---~~-------~~~~~~g~~hia~~v~di~~~~~~l~~~~~~~----G~~~~~~p  255 (291)
                      .|+|..+..   ..       ....|+|++||||.|+||.+++++|    ++.    |++++..|
T Consensus       235 ~ipLnEP~~~~~~~SqI~eFL~~~~G~GIQHIAl~tdDI~~av~~L----ra~~~~~Gv~fL~~P  295 (398)
T PLN02875        235 LLPLNEPTFGTKRKSQIQTYLEHNEGPGLQHLALKSDDIFGTLREM----RARSHIGGFEFMPPP  295 (398)
T ss_pred             EEEeccCCCCCCCcChHHHHHHhcCCCCeeEEEeecCCHHHHHHHH----HhccccCCeecCCCC
Confidence            677766432   11       1345789999999999999999999    898    99999865

>PRK10291 glyoxalase I; Provisional

Probab=99.84  E-value=1.9e-19  Score=134.91  Aligned_cols=124  Identities=53%  Similarity=0.958  Sum_probs=95.9

Q ss_pred             EEEeCCHHHHHHHHHHhcCCEEEEEeccCCCceeeEEeeccCCCcceEEEeeecCCCCcccCCCCceEEEEEECCHHHHH
Q 022831           28 VYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHLAIATEDVYKMV  107 (291)
Q Consensus        28 ~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~g~~~~~i~~~v~d~~~~~  107 (291)
                      .|.|+|++++++||+++|||++..+...+...+..+++..++......+++....+...+..+.++.|+||.|+|+++++
T Consensus         1 ~l~V~Dle~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~~hlaf~V~d~~~~~   80 (129)
T PRK10291          1 MLRVGDLQRSIDFYTNVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNWGVDKYELGTAYGHIALSVDNAAEAC   80 (129)
T ss_pred             CEEecCHHHHHHHHHhccCCEEEEeecCCCCcEEEEEEccCCCCCcceEEeeecCCCCCCcCCCCeeEEEEEeCCHHHHH
Confidence            37899999999999999999998766555556667777665433444566654433334445668899999999999999


Q ss_pred             HHHHHcCCeeeeCCccCCCCceEEEEEECCCCcEEEEEecCCCC
Q 022831          108 ENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFELIQRGPTP  151 (291)
Q Consensus       108 ~~l~~~G~~~~~~~~~~~~g~~~~~~~~dP~G~~iel~~~~~~~  151 (291)
                      ++|+++|+++..++.+.+++....+|++||||+.|||++....+
T Consensus        81 ~~l~~~G~~~~~~~~~~~~~~~~~~~i~DPdG~~iel~~~~~~~  124 (129)
T PRK10291         81 EKIRQNGGNVTREAGPVKGGTTVIAFVEDPDGYKIELIEEKDAG  124 (129)
T ss_pred             HHHHHcCCccccCCcccCCCceEEEEEECCCCCEEEEEEccccc
Confidence            99999999988766666666555678899999999999977543

>PLN02367 lactoylglutathione lyase

Probab=99.84  E-value=3.6e-19  Score=142.65  Aligned_cols=129  Identities=34%  Similarity=0.651  Sum_probs=103.6

Q ss_pred             CccceeeEEEEeCCHHHHHHHHHHhcCCEEEEEeccCCCceeeEEeeccCC---------------CcceEEEeeecCCC
Q 022831           20 DKRRLLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPE---------------QSYFVVELTYNYGV   84 (291)
Q Consensus        20 ~~~~i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~l~l~~~~~~   84 (291)
                      .-..+.|+.|.|+|++++++||+++|||++..+.+.+++++..++++.++.               .....|||.++.+.
T Consensus        72 ~~~~~~HtmlRVkDle~Sl~FYt~vLGm~ll~r~d~pe~~f~lyFL~~~~~~~~p~d~~~r~~~~~~~~~~LELt~n~g~  151 (233)
T PLN02367         72 KGYIMQQTMYRIKDPKASLDFYSRVLGMSLLKRLDFPEMKFSLYFMGYEDTASAPTDPTERTVWTFGQKATIELTHNWGT  151 (233)
T ss_pred             CCcEEEEEEEEeCCHHHHHHHHHHhcCCEEeEEEecCCCcEEEEEeecCCccccccccccceeeccCCCCEEEEecCCCC
Confidence            346799999999999999999999999999998888888888888865321               11357899876553


Q ss_pred             C------cccCC----CCceEEEEEECCHHHHHHHHHHcCCeeeeCCccCCCCceEEEEEECCCCcEEEEEecCCC
Q 022831           85 T------SYDIG----TGFGHLAIATEDVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFELIQRGPT  150 (291)
Q Consensus        85 ~------~~~~g----~~~~~i~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dP~G~~iel~~~~~~  150 (291)
                      .      .+..|    .|+.||||.|+|+++++++|+++|+++...|....+  ..++|++||||++|||++....
T Consensus       152 e~~~~~~~y~~gn~~p~G~~HIaf~VdDVdaa~erL~a~Gv~~v~~P~~g~~--~riaFIkDPDGn~IEL~e~~~~  225 (233)
T PLN02367        152 ESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFEELGVEFVKKPNDGKM--KGIAFIKDPDGYWIEIFDLKTI  225 (233)
T ss_pred             CccccchhcccCCCCCCCceEEEEEcCCHHHHHHHHHHCCCEEEeCCccCCc--eEEEEEECCCCCEEEEEecccc
Confidence            3      13333    489999999999999999999999999877654433  3458899999999999987643

>PLN03042 Lactoylglutathione lyase; Provisional

Probab=99.84  E-value=5.3e-19  Score=139.00  Aligned_cols=147  Identities=35%  Similarity=0.614  Sum_probs=108.3

Q ss_pred             CCCCCCCCCch--hhccCCcCC--ccceeeEEEEeCCHHHHHHHHHHhcCCEEEEEeccCCCceeeEEeeccCCC-----
Q 022831            1 MAEASPAVANA--ELLEWPKKD--KRRLLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQ-----   71 (291)
Q Consensus         1 ~~~~~~~~~~~--~~~~~~~~~--~~~i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~-----   71 (291)
                      ||.||.-+++.  ++.+++...  -.++.|+.|.|.|++++++||+++|||++..+...++..+..++++.+...     
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ht~i~V~Dle~Si~FY~~vLG~~~~~r~~~~~~~~~~~fl~~~~~~~~~~~   80 (185)
T PLN03042          1 MASASKESAANNPGLCGNPDEATKGYIMQQTMFRIKDPKASLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDSETAPTD   80 (185)
T ss_pred             CCCCCcCCcccCcccccCCCCCCCCcEEEEEEEeeCCHHHHHHHHHhhcCCEEEEEEEcCCCceEEEEEecCCcccCCcc
Confidence            67777666554  344444333  367999999999999999999999999998887776777777777643210     


Q ss_pred             ----------cceEEEeeecCCCCc------cc----CCCCceEEEEEECCHHHHHHHHHHcCCeeeeCCccCCCCceEE
Q 022831           72 ----------SYFVVELTYNYGVTS------YD----IGTGFGHLAIATEDVYKMVENIRAKGGNVTREPGPLKGMTTHF  131 (291)
Q Consensus        72 ----------~~~~l~l~~~~~~~~------~~----~g~~~~~i~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~  131 (291)
                                ....|+|..+.+...      +.    .+.|+.||+|.|+|+++++++|.++|+++...|.... + ..+
T Consensus        81 ~~~~~~~l~~~~~~lEL~~~~~~~~~p~~~~~~~~~~~~~G~~Hlaf~V~Dvd~~~~~L~~~Gv~v~~~p~~~~-~-~~~  158 (185)
T PLN03042         81 PPERTVWTFGRKATIELTHNWGTESDPEFKGYHNGNSDPRGFGHIGITVDDVYKACERFEKLGVEFVKKPDDGK-M-KGL  158 (185)
T ss_pred             hhhcccccccCCCEEEEEEcCCCcccccccccccCCCCCCCccEEEEEcCCHHHHHHHHHHCCCeEEeCCccCC-c-eeE
Confidence                      234688876543221      22    2248999999999999999999999999886654322 2 345


Q ss_pred             EEEECCCCcEEEEEecCC
Q 022831          132 AFVKDPDGYIFELIQRGP  149 (291)
Q Consensus       132 ~~~~dP~G~~iel~~~~~  149 (291)
                      +|++||+|+.|||++...
T Consensus       159 ~fi~DPdG~~IEl~e~~~  176 (185)
T PLN03042        159 AFIKDPDGYWIEIFDLKR  176 (185)
T ss_pred             EEEECCCCCEEEEEECCC
Confidence            788999999999998754

>PRK10291 glyoxalase I; Provisional

Probab=99.83  E-value=1.2e-19  Score=135.98  Aligned_cols=124  Identities=47%  Similarity=0.830  Sum_probs=94.4

Q ss_pred             eeeeCCchhhHHHHHHhcCCeeeeeccCcccceeeeeeccCCCCcceEEEEeEecCceeeccCceeeEEEEEecChHHHH
Q 022831          158 MLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAISTDDVYKSA  237 (291)
Q Consensus       158 ~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~~hia~~v~di~~~~  237 (291)
                      .|.|+|++++.+||+++|||++......++..+.+.++..++......+++....+...+..+.+++|++|.|+|+++++
T Consensus         1 ~l~V~Dle~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~~hlaf~V~d~~~~~   80 (129)
T PRK10291          1 MLRVGDLQRSIDFYTNVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNWGVDKYELGTAYGHIALSVDNAAEAC   80 (129)
T ss_pred             CEEecCHHHHHHHHHhccCCEEEEeecCCCCcEEEEEEccCCCCCcceEEeeecCCCCCCcCCCCeeEEEEEeCCHHHHH
Confidence            47899999999999999999987665555555667777654433345566655443333344568999999999999999


Q ss_pred             HHHHHHHHhhCCeeeecccccCCCCceEEEEECCCCCeEEEEechhhh
Q 022831          238 EVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNEDFL  285 (291)
Q Consensus       238 ~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~~~~  285 (291)
                      +++    ++.|+++...|.+.++.+.+++||+||||++|||++..+..
T Consensus        81 ~~l----~~~G~~~~~~~~~~~~~~~~~~~i~DPdG~~iel~~~~~~~  124 (129)
T PRK10291         81 EKI----RQNGGNVTREAGPVKGGTTVIAFVEDPDGYKIELIEEKDAG  124 (129)
T ss_pred             HHH----HHcCCccccCCcccCCCceEEEEEECCCCCEEEEEEccccc
Confidence            999    99999998877666553345688999999999999977543

>PLN03042 Lactoylglutathione lyase; Provisional

Probab=99.80  E-value=1.3e-18  Score=136.79  Aligned_cols=128  Identities=30%  Similarity=0.585  Sum_probs=98.3

Q ss_pred             CCCceeeeeeeCCchhhHHHHHHhcCCeeeeeccCcccceeeeeeccCCCC---------------cceEEEEeEecCce
Q 022831          151 PEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEED---------------QTTVLELAYSYGVT  215 (291)
Q Consensus       151 ~~~~~hv~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~l~l~~~~~~~  215 (291)
                      ..++.|+.|+|.|++++++||+++|||++..+...++..+.+++++.+...               ....|+|..+.+..
T Consensus        25 ~~~~~Ht~i~V~Dle~Si~FY~~vLG~~~~~r~~~~~~~~~~~fl~~~~~~~~~~~~~~~~~~l~~~~~~lEL~~~~~~~  104 (185)
T PLN03042         25 GYIMQQTMFRIKDPKASLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDSETAPTDPPERTVWTFGRKATIELTHNWGTE  104 (185)
T ss_pred             CcEEEEEEEeeCCHHHHHHHHHhhcCCEEEEEEEcCCCceEEEEEecCCcccCCcchhhcccccccCCCEEEEEEcCCCc
Confidence            356999999999999999999999999988876555656777777632210               13578887654322


Q ss_pred             e------ec----cCceeeEEEEEecChHHHHHHHHHHHHhhCCeeeecccccCCCCceEEEEECCCCCeEEEEechhh
Q 022831          216 E------YT----KGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNEDF  284 (291)
Q Consensus       216 ~------~~----~~~g~~hia~~v~di~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~~~  284 (291)
                      .      +.    .+.|+.|++|.|+|++++++++    ++.|+++...|....  +.+++||+||||++|||++.+-.
T Consensus       105 ~~p~~~~~~~~~~~~~G~~Hlaf~V~Dvd~~~~~L----~~~Gv~v~~~p~~~~--~~~~~fi~DPdG~~IEl~e~~~~  177 (185)
T PLN03042        105 SDPEFKGYHNGNSDPRGFGHIGITVDDVYKACERF----EKLGVEFVKKPDDGK--MKGLAFIKDPDGYWIEIFDLKRI  177 (185)
T ss_pred             ccccccccccCCCCCCCccEEEEEcCCHHHHHHHH----HHCCCeEEeCCccCC--ceeEEEEECCCCCEEEEEECCCc
Confidence            1      21    1248999999999999999999    999999987765332  35678899999999999997654

>cd08358 Glo_EDI_BRP_like_21 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.80  E-value=6.5e-18  Score=124.59  Aligned_cols=115  Identities=43%  Similarity=0.762  Sum_probs=87.8

Q ss_pred             cceeeEEEEeCCHHHHHHHHHHhcCCEEEEEeccCC-----------CceeeEEeeccCCCcceEEEeeecCCCCcccCC
Q 022831           22 RRLLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPE-----------EKYSNAFLGFGPEQSYFVVELTYNYGVTSYDIG   90 (291)
Q Consensus        22 ~~i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~g   90 (291)
                      .++.|++|.|+|+++|++||+++|||++..+.+.++           +.+..++++..+......++|..+.+..++..|
T Consensus         1 ~~~~Hv~irV~DlerSi~FY~~vLG~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~lEL~~n~~~~~~~~g   80 (127)
T cd08358           1 RRALHFVFKVGNRNKTIKFYREVLGMKVLRHEEFEEGCKAACNGPYDGKWSKTMIGYGPEDDHFVVELTYNYGIGDYELG   80 (127)
T ss_pred             CceEEEEEEeCCHHHHHHHHHHhcCCEEEeeecCccccccccccCCCCcEEEEEEecCCCCCccEEEeEecCCCCCCCCC
Confidence            368999999999999999999999999887665554           344445565544456678999987766556656


Q ss_pred             CCceEEEEEECCHHHHHHHHHHcCCeeeeCCccCCCCceEEEEEECCCCcEEEEEe
Q 022831           91 TGFGHLAIATEDVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFELIQ  146 (291)
Q Consensus        91 ~~~~~i~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dP~G~~iel~~  146 (291)
                      .+  |++|.|++. ++.++|+++|+++...+.    +   ++|++||||+.|||+.
T Consensus        81 ~~--~~hlav~~~-d~~~~l~~~Gv~~~~~~~----~---~~fi~DPDG~~ie~~~  126 (127)
T cd08358          81 ND--FLGITIHSK-QAVSNAKKHNWPVTEVED----G---VYEVKAPGGYKFYLID  126 (127)
T ss_pred             CC--EEEEEEECH-HHHHHHHHCCCceecCCC----C---EEEEECCCCCEEEEec
Confidence            55  667777766 455999999999876443    2   5889999999999974

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd08353 Glo_EDI_BRP_like_7 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.79  E-value=4.9e-18  Score=129.35  Aligned_cols=123  Identities=20%  Similarity=0.310  Sum_probs=88.8

Q ss_pred             ccceeeEEEEeCCHHHHHHHHHHhcCCEEEEEeccCC-----------CceeeEEeeccCCCcceEEEeeecCCCC----
Q 022831           21 KRRLLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPE-----------EKYSNAFLGFGPEQSYFVVELTYNYGVT----   85 (291)
Q Consensus        21 ~~~i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~l~l~~~~~~~----   85 (291)
                      +.+++||+|.|+|++++.+||++ |||++..+...+.           ......++...  .....++|.....+.    
T Consensus         1 ~~~i~Hi~i~v~Dl~~s~~FY~~-LG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~--~g~~~iel~~~~~~~~~~~   77 (142)
T cd08353           1 VSRMDNVGIVVRDLEAAIAFFLE-LGLELEGRAEIEGEWADRVTGLDGVRVEIAMLRTP--DGHSRLELSKFHHPAVIAD   77 (142)
T ss_pred             CceeeeEEEEeCCHHHHHHHHHH-cCCEEccccccChHHHHHhcCCCCceEEEEEEeCC--CCCceEEEEEecCCCCcCc
Confidence            57899999999999999999998 9998865432211           12233444422  234456666532111    


Q ss_pred             ---cccCCCCceEEEEEECCHHHHHHHHHHcCCeeeeCCccCCCCceEEEEEECCCCcEEEEEec
Q 022831           86 ---SYDIGTGFGHLAIATEDVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFELIQR  147 (291)
Q Consensus        86 ---~~~~g~~~~~i~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dP~G~~iel~~~  147 (291)
                         ....+.|+.||||.|+|+++++++|+++|+++..++....++.+ .+|++||+|+.|||++.
T Consensus        78 ~~~~~~~~~g~~hia~~v~d~d~~~~~l~~~G~~~~~~~~~~~~~~r-~~~~~DPdG~~iEl~e~  141 (142)
T cd08353          78 HRPAPVNALGLRRVMFAVDDIDARVARLRKHGAELVGEVVQYENSYR-LCYIRGPEGILIELAEQ  141 (142)
T ss_pred             CCCCCCCCCCceEEEEEeCCHHHHHHHHHHCCCceeCCceecCCCeE-EEEEECCCCCEEEeeec
Confidence               11234578899999999999999999999998876655555544 58999999999999984

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The structures of this family demonstrate domain swapping, which is shared by glyoxalase I and antibiotic resistance proteins.

>cd08342 HPPD_N_like N-terminal domain of 4-hydroxyphenylpyruvate dioxygenase (HPPD) and hydroxymandelate Synthase (HmaS)

Probab=99.79  E-value=2e-18  Score=130.49  Aligned_cols=124  Identities=20%  Similarity=0.240  Sum_probs=94.6

Q ss_pred             ceeeeeeeCCchhhHHHHHHhcCCeeeeeccCcccceeeeeeccCCCCcceEEEEeEecCcee------eccCceeeEEE
Q 022831          154 LCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTE------YTKGNAYAQVA  227 (291)
Q Consensus       154 ~~hv~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~------~~~~~g~~hia  227 (291)
                      ++|+.|.|+|++++.+||+++|||++......++  ....++..+    ...+.+........      ...+.+++|++
T Consensus         1 ~~Hi~i~V~D~e~s~~FY~~vLGf~~~~~~~~~~--~~~~~~~~g----~~~l~l~~~~~~~~~~~~~~~~~~~g~~hia   74 (136)
T cd08342           1 FDHVEFYVGNAKQLASWFSTKLGFEPVAYHGSED--KASYLLRQG----DINFVLNSPLNSFAPVADFLEKHGDGVCDVA   74 (136)
T ss_pred             CeEEEEEeCCHHHHHHHHHHhcCCeEEEecCCCc--eEEEEEEcC----CEEEEEecCCCCCCchHHHHHhcCCceEEEE
Confidence            5899999999999999999999999877643321  223333322    34555543222111      11356889999


Q ss_pred             EEecChHHHHHHHHHHHHhhCCeeeecccccCCCCceEEEEECCCCCeEEEEechhhhhhh
Q 022831          228 ISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNEDFLKEL  288 (291)
Q Consensus       228 ~~v~di~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~~~~~~~  288 (291)
                      |.|+|++++++++    +++|+++..+|...++ +.+.++++||||+.|||++++.+.+++
T Consensus        75 ~~V~Dvda~~~~l----~~~G~~v~~~p~~~~~-~~~~~~i~dp~G~~ie~~~~~~~~~~~  130 (136)
T cd08342          75 FRVDDAAAAYERA----VARGAKPVQEPVEEPG-ELKIAAIKGYGDSLHTLVDRKGYKGPF  130 (136)
T ss_pred             EEeCCHHHHHHHH----HHcCCeEccCceecCC-eEEEEEEeccCCcEEEEEecCCCCCcc
Confidence            9999999999999    9999999998887454 678999999999999999999887654

HppD and HmaS are non-heme iron-dependent dioxygenases, which modify a common substrate, 4-hydroxyphenylpyruvate (HPP), but yield different products. HPPD catalyzes the second reaction in tyrosine catabolism, the conversion of HPP to homogentisate (2,5-dihydroxyphenylacetic acid, HG). HmaS converts HPP to 4-hydroxymandelate, a committed step in the formation of hydroxyphenylglycerine, a structural component of nonproteinogenic macrocyclic peptide antibiotics, such as vancomycin. If the emphasis is on catalytic chemistry, HPPD and HmaS are classified as members of a large family of alpha-keto acid dependent mononuclear non-heme iron oxygenases most of which require Fe(II), molecular oxygen, and an alpha-keto acid (typically alpha-ketoglutarate) to either oxygenate or oxidize a third substrate. Both enzymes are exceptions in that they require two, instead of three, su

>PRK11478 putative lyase; Provisional

Probab=99.79  E-value=9.4e-18  Score=125.60  Aligned_cols=124  Identities=19%  Similarity=0.269  Sum_probs=85.2

Q ss_pred             CCccceeeEEEEeCCHHHHHHHHHHhcCCEEEEEeccCC-CceeeEEeeccCCCcceEEEeeecCC-C--CcccCCCCce
Q 022831           19 KDKRRLLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPE-EKYSNAFLGFGPEQSYFVVELTYNYG-V--TSYDIGTGFG   94 (291)
Q Consensus        19 ~~~~~i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~l~~~~~-~--~~~~~g~~~~   94 (291)
                      +.+.+|+||.|.|+|++++.+||+++|||++..+...+. ..+. ..+..+  + ...+++..... .  .......++.
T Consensus         2 ~~i~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~-~~~~~~--~-~~~l~l~~~~~~~~~~~~~~~~g~~   77 (129)
T PRK11478          2 LGLKQVHHIAIIATDYAVSKAFYCDILGFTLQSEVYREARDSWK-GDLALN--G-QYVIELFSFPFPPERPSRPEACGLR   77 (129)
T ss_pred             CCcceecEEEEEcCCHHHHHHHHHHHhCCEecccccccccccce-eeEecC--C-CcEEEEEEecCCCCCCCCCCCCcee
Confidence            467889999999999999999999999999864322211 1111 122221  1 23455543211 1  1112234788


Q ss_pred             EEEEEECCHHHHHHHHHHcCCeeeeCCccCCCCceEEEEEECCCCcEEEEEec
Q 022831           95 HLAIATEDVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFELIQR  147 (291)
Q Consensus        95 ~i~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dP~G~~iel~~~  147 (291)
                      |++|.|+|+++++++|.+.|+++...+....+|. .++|++||+|+.||+++.
T Consensus        78 hi~f~v~d~~~~~~~l~~~G~~~~~~~~~~~~g~-~~~~~~DPdG~~iEl~~~  129 (129)
T PRK11478         78 HLAFSVDDIDAAVAHLESHNVKCEAIRVDPYTQK-RFTFFNDPDGLPLELYEQ  129 (129)
T ss_pred             EEEEEeCCHHHHHHHHHHcCCeeeccccCCCCCC-EEEEEECCCCCEEEEEeC
Confidence            9999999999999999999999764433333444 458999999999999873

>cd07233 Glyoxalase_I Glyoxalase I catalyzes the isomerization of the hemithioacetal, formed by a 2-oxoaldehyde and glutathione, to S-D-lactoylglutathione

Probab=99.78  E-value=6.2e-18  Score=125.03  Aligned_cols=120  Identities=43%  Similarity=0.742  Sum_probs=91.0

Q ss_pred             ceeeeeeeCCchhhHHHHHHhcCCeeeeeccCcccceeeeeeccCCCCcceEEEEeEecCc-eeeccCceeeEEEEEecC
Q 022831          154 LCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGV-TEYTKGNAYAQVAISTDD  232 (291)
Q Consensus       154 ~~hv~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~-~~~~~~~g~~hia~~v~d  232 (291)
                      +.|+.+.|+|++++.+||+++||+++......+++.+...++..++......+++....+. .+...+.++.|++|.|+|
T Consensus         1 ~~hv~i~v~d~~~a~~fY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~~v~d   80 (121)
T cd07233           1 FLHTMLRVKDLEKSLDFYTDVLGMKLLRRKDFPEGKFTLVFLGYPDEDSEGVLELTYNWGTEEPYDNGNGFGHLAFAVDD   80 (121)
T ss_pred             CeeEEEEecCcHHHHHHHHhccCCeEEEEEecCCCceEEEEecCCCCCCccEEEEEecCCCCCCcCCCCCeEEEEEEeCC
Confidence            5799999999999999999999999876544343345555666443112455666543322 222334578999999999


Q ss_pred             hHHHHHHHHHHHHhhCCeeeecccccCCCCceEEEEECCCCCeEEEE
Q 022831          233 VYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLV  279 (291)
Q Consensus       233 i~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iel~  279 (291)
                      ++++++++    +++|+++..+|...  .+.+++||+|||||+|||+
T Consensus        81 id~~~~~l----~~~G~~~~~~~~~~--~~~~~~~~~DpdG~~iE~~  121 (121)
T cd07233          81 VYAACERL----EEMGVEVTKPPGDG--GMKGIAFIKDPDGYWIELI  121 (121)
T ss_pred             HHHHHHHH----HHCCCEEeeCCccC--CCceEEEEECCCCCEEEeC
Confidence            99999999    99999999988765  3467899999999999985

Glyoxalase I (also known as lactoylglutathione lyase; EC 4.4.1.5) is part of the glyoxalase system, a two-step system for detoxifying methylglyoxal, a side product of glycolysis. This system is responsible for the conversion of reactive, acyclic alpha-oxoaldehydes into the corresponding alpha-hydroxyacids and involves 2 enzymes, glyoxalase I and II. Glyoxalase I catalyses an intramolecular redox reaction of the hemithioacetal (formed from methylglyoxal and glutathione) to form the thioester, S-D-lactoylglutathione. This reaction involves the transfer of two hydrogen atoms from C1 to C2 of the methylglyoxal, and proceeds via an ene-diol intermediate. Glyoxalase I has a requirement for bound metal ions for catalysis. Eukaryotic glyoxalase I prefers the divalent cation zinc as cofactor, whereas Escherichia coil and other prokaryotic gly

>cd08358 Glo_EDI_BRP_like_21 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.78  E-value=5.1e-18  Score=125.15  Aligned_cols=114  Identities=31%  Similarity=0.548  Sum_probs=85.8

Q ss_pred             CceeeeeeeCCchhhHHHHHHhcCCeeeeeccCcc-----------cceeeeeeccCCCCcceEEEEeEecCceeeccCc
Q 022831          153 PLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPE-----------LKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGN  221 (291)
Q Consensus       153 ~~~hv~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~  221 (291)
                      ++.|++|+|+|+++|.+||+++|||++..+...++           +.+...++...+...+..++|..+++..+++.+.
T Consensus         2 ~~~Hv~irV~DlerSi~FY~~vLG~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~lEL~~n~~~~~~~~g~   81 (127)
T cd08358           2 RALHFVFKVGNRNKTIKFYREVLGMKVLRHEEFEEGCKAACNGPYDGKWSKTMIGYGPEDDHFVVELTYNYGIGDYELGN   81 (127)
T ss_pred             ceEEEEEEeCCHHHHHHHHHHhcCCEEEeeecCccccccccccCCCCcEEEEEEecCCCCCccEEEeEecCCCCCCCCCC
Confidence            68999999999999999999999999877654443           3444444544333345789998877765555555


Q ss_pred             eeeEEEEEecChHHHHHHHHHHHHhhCCeeeecccccCCCCceEEEEECCCCCeEEEEe
Q 022831          222 AYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVD  280 (291)
Q Consensus       222 g~~hia~~v~di~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iel~~  280 (291)
                      +  |++|.|++. ++.+++    +++|+++...|.       .+++++||||+.|||+.
T Consensus        82 ~--~~hlav~~~-d~~~~l----~~~Gv~~~~~~~-------~~~fi~DPDG~~ie~~~  126 (127)
T cd08358          82 D--FLGITIHSK-QAVSNA----KKHNWPVTEVED-------GVYEVKAPGGYKFYLID  126 (127)
T ss_pred             C--EEEEEEECH-HHHHHH----HHCCCceecCCC-------CEEEEECCCCCEEEEec
Confidence            5  566666665 566888    999998876554       27899999999999985

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>PLN02300 lactoylglutathione lyase

Probab=99.78  E-value=3.4e-18  Score=145.28  Aligned_cols=134  Identities=44%  Similarity=0.753  Sum_probs=103.1

Q ss_pred             CCCCCceeeeeeeCCchhhHHHHHHhcCCeeeeeccCcccceeeeeeccCCCCcceEEEEeEecCceeeccCceeeEEEE
Q 022831          149 PTPEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAI  228 (291)
Q Consensus       149 ~~~~~~~hv~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~~hia~  228 (291)
                      ....++.|+.|.|+|++++.+||+++|||+...+...++..+...++..+....+..+++....+......++|+.|++|
T Consensus        20 ~~i~~l~Hv~l~V~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~~~g~~hia~   99 (286)
T PLN02300         20 KDKRRMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSNFVVELTYNYGVDKYDIGTGFGHFGI   99 (286)
T ss_pred             cccceEEEEEEEeCCHHHHHHHHHHhcCCEEEEeeecCCCcEEEEEEccCCCCCceEEEEeccCCCCccccCCCccEEEE
Confidence            34577999999999999999999999999987654434444555566544434456677755433323334568899999


Q ss_pred             EecChHHHHHHHHHHHHhhCCeeeecccccCCCCceEEEEECCCCCeEEEEechhhhh
Q 022831          229 STDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNEDFLK  286 (291)
Q Consensus       229 ~v~di~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~~~~~  286 (291)
                      .|+|++++++++    +++|+++...|...++++.+++||+||||+.|||+++.....
T Consensus       100 ~v~dvd~~~~~l----~~~G~~i~~~~~~~~~g~~~~~~~~DPdG~~iEl~~~~~~~~  153 (286)
T PLN02300        100 AVEDVAKTVELV----KAKGGKVTREPGPVKGGKSVIAFVKDPDGYKFELIQRGPTPE  153 (286)
T ss_pred             EeCCHHHHHHHH----HHCCCeeecCCcccCCCceEEEEEECCCCCEEEEEeCCCCCC
Confidence            999999999999    999999998887776645677899999999999999876544

>cd07233 Glyoxalase_I Glyoxalase I catalyzes the isomerization of the hemithioacetal, formed by a 2-oxoaldehyde and glutathione, to S-D-lactoylglutathione

Probab=99.78  E-value=1.7e-17  Score=122.72  Aligned_cols=120  Identities=51%  Similarity=0.931  Sum_probs=89.6

Q ss_pred             eeeEEEEeCCHHHHHHHHHHhcCCEEEEEeccCCCceeeEEeeccCCCcceEEEeeecCCC-CcccCCCCceEEEEEECC
Q 022831           24 LLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGV-TSYDIGTGFGHLAIATED  102 (291)
Q Consensus        24 i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~-~~~~~g~~~~~i~~~v~d  102 (291)
                      +.|+.|.|+|++++.+||+++|||++......+++.+..+++..........+++....+. .....+.+..|++|.|+|
T Consensus         1 ~~hv~i~v~d~~~a~~fY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~~v~d   80 (121)
T cd07233           1 FLHTMLRVKDLEKSLDFYTDVLGMKLLRRKDFPEGKFTLVFLGYPDEDSEGVLELTYNWGTEEPYDNGNGFGHLAFAVDD   80 (121)
T ss_pred             CeeEEEEecCcHHHHHHHHhccCCeEEEEEecCCCceEEEEecCCCCCCccEEEEEecCCCCCCcCCCCCeEEEEEEeCC
Confidence            5899999999999999999999999987654444445566676533112344555543222 233344578899999999


Q ss_pred             HHHHHHHHHHcCCeeeeCCccCCCCceEEEEEECCCCcEEEEE
Q 022831          103 VYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFELI  145 (291)
Q Consensus       103 ~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dP~G~~iel~  145 (291)
                      ++++++++.++|+++..++... ++ ..+++++||+|+.||++
T Consensus        81 id~~~~~l~~~G~~~~~~~~~~-~~-~~~~~~~DpdG~~iE~~  121 (121)
T cd07233          81 VYAACERLEEMGVEVTKPPGDG-GM-KGIAFIKDPDGYWIELI  121 (121)
T ss_pred             HHHHHHHHHHCCCEEeeCCccC-CC-ceEEEEECCCCCEEEeC
Confidence            9999999999999998877655 33 34588999999999985

Glyoxalase I (also known as lactoylglutathione lyase; EC 4.4.1.5) is part of the glyoxalase system, a two-step system for detoxifying methylglyoxal, a side product of glycolysis. This system is responsible for the conversion of reactive, acyclic alpha-oxoaldehydes into the corresponding alpha-hydroxyacids and involves 2 enzymes, glyoxalase I and II. Glyoxalase I catalyses an intramolecular redox reaction of the hemithioacetal (formed from methylglyoxal and glutathione) to form the thioester, S-D-lactoylglutathione. This reaction involves the transfer of two hydrogen atoms from C1 to C2 of the methylglyoxal, and proceeds via an ene-diol intermediate. Glyoxalase I has a requirement for bound metal ions for catalysis. Eukaryotic glyoxalase I prefers the divalent cation zinc as cofactor, whereas Escherichia coil and other prokaryotic gly

>KOG0638 consensus 4-hydroxyphenylpyruvate dioxygenase [Amino acid transport and metabolism]

Probab=99.78  E-value=1.3e-18  Score=141.05  Aligned_cols=256  Identities=19%  Similarity=0.310  Sum_probs=175.4

Q ss_pred             CccceeeEEEEeCCHHHHHHHHHHhcCCEEEEEeccCCCceeeEEeeccCCCcceEEEeeecCCCC-----cccCCCCce
Q 022831           20 DKRRLLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVT-----SYDIGTGFG   94 (291)
Q Consensus        20 ~~~~i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~-----~~~~g~~~~   94 (291)
                      .+.+++||.+.|.|...+.+||+..|||+.........+....+...+.++...+.+.-......+     -..+|.|+.
T Consensus        14 ~~l~f~Hi~F~vgna~q~A~~y~~~fGfep~A~~~letg~~~~~s~alr~g~~vFv~~s~~~p~~~~~G~~l~~Hgdgvk   93 (381)
T KOG0638|consen   14 KFLRFHHIEFWVGNAKQAARWYCSGFGFEPLAYRGLETGSREWASHALRQGKIVFVFNSAYNPDNSEYGDHLVKHGDGVK   93 (381)
T ss_pred             ceeeeeEEEEEecCcHHHHHHHHhhcCCcchhcccccccchHHHHHHhhcCCEEEEEecCCCCCchhhhhhhhhcccchh
Confidence            478999999999999999999999999999875433332212222223233333333222222221     124677888


Q ss_pred             EEEEEECCHHHHHHHHHHcCCeeeeCCccCCC--CceEEEEEECCCCcEEEEEecCCC----------------------
Q 022831           95 HLAIATEDVYKMVENIRAKGGNVTREPGPLKG--MTTHFAFVKDPDGYIFELIQRGPT----------------------  150 (291)
Q Consensus        95 ~i~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~--g~~~~~~~~dP~G~~iel~~~~~~----------------------  150 (291)
                      .+||+|+|++++.+.++++|+++..+|.+..+  |...++.++.+.-....+++....                      
T Consensus        94 dvafeVeD~da~~~~~va~Ga~v~~~p~~~~da~G~v~~A~l~tygd~thtlvEr~~y~g~FLPGF~~v~~~~~fp~l~~  173 (381)
T KOG0638|consen   94 DVAFEVEDADAIFQEAVANGAKVVRPPWEESDAQGAVTYAVLKTYGDTTHTLVERKGYKGPFLPGFEPVSSDALFPKLPK  173 (381)
T ss_pred             ceEEEecchHHHHHHHHHcCCcccCCcceeeccCCcEEEEEEecccchhhhhhhhccccccCCCCcccCccccccCCCCc
Confidence            99999999999999999999999988877664  445567778887666666665420                      


Q ss_pred             --CCCceeeeeeeC--CchhhHHHHHHhcCCeeeeeccCccc-----ceeeeeeccCCCCcceEEEEeEecCc-e-----
Q 022831          151 --PEPLCQVMLRVG--DLGRSIKFYEKALGMKLLRTIDSPEL-----KCALAMLGYAEEDQTTVLELAYSYGV-T-----  215 (291)
Q Consensus       151 --~~~~~hv~l~v~--D~~~~~~Fy~~~lG~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~l~l~~~~~~-~-----  215 (291)
                        -.+++|++.+++  .++.+.+||.+.|||...+..++..-     ..+.+.+.  +.+....+.+.++... .     
T Consensus       174 ~~~~~iDH~vgn~p~~em~sa~~wy~~~l~Fhrfwsvdd~~v~te~SaLrs~vla--n~~esi~mpinEp~~G~k~ksQI  251 (381)
T KOG0638|consen  174 GGLNRIDHVVGNQPDGEMESALRWYEKCLGFHRFWSVDDSQVHTEYSALRSIVLA--NYEESIKMPINEPAPGKKKKSQI  251 (381)
T ss_pred             cceeehhhhhccCCcccchHHHHHHHHhhcccccccCCcchhhhHHHHHHHHHHh--cCCccEEEeccCCCCCCccHHHH
Confidence              135899999999  58999999999999998887664321     12223333  3333344444443211 1     


Q ss_pred             ----eeccCceeeEEEEEecChHHHHHHHHHHHHhhCCeeeecccc--------cCCC----C--------ceEEEEECC
Q 022831          216 ----EYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGP--------IPGL----N--------TKITSFVDP  271 (291)
Q Consensus       216 ----~~~~~~g~~hia~~v~di~~~~~~l~~~~~~~G~~~~~~p~~--------~~~~----~--------~~~~~~~DP  271 (291)
                          .++.|.|++|+++.++||-.+.+.+    ++.|+++..+|..        ....    +        ..+..=.|-
T Consensus       252 qeyv~y~gG~GvQHiaL~tedIi~Ai~~l----r~rG~eFLs~Ps~YYqnl~erl~~~~~~vked~~~l~el~ILvD~De  327 (381)
T KOG0638|consen  252 QEYVEYHGGAGVQHIALNTEDIIEAIRGL----RARGGEFLSPPSTYYQNLKERLSTSIRKVKEDIKLLEELGILVDFDE  327 (381)
T ss_pred             HHHHHhcCCCceeeeeecchHHHHHHHHH----HhcCCccccCCHHHHHhHHHHhhhhhhhhhccHHHHHHcCeEEecCC
Confidence                2667899999999999999999999    9999999998853        1100    0        012333788


Q ss_pred             CCCeEEEEec
Q 022831          272 DGWKTVLVDN  281 (291)
Q Consensus       272 dG~~iel~~~  281 (291)
                      .|.++.|+..
T Consensus       328 ~gyLLQIFTK  337 (381)
T KOG0638|consen  328 NGYLLQIFTK  337 (381)
T ss_pred             CcEEeeeecc
Confidence            8888888753

>cd08342 HPPD_N_like N-terminal domain of 4-hydroxyphenylpyruvate dioxygenase (HPPD) and hydroxymandelate Synthase (HmaS)

Probab=99.77  E-value=2.6e-17  Score=124.41  Aligned_cols=120  Identities=18%  Similarity=0.218  Sum_probs=89.6

Q ss_pred             eeeEEEEeCCHHHHHHHHHHhcCCEEEEEeccCCCceeeEEeeccCCCcceEEEeeecCCCCc------ccCCCCceEEE
Q 022831           24 LLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTS------YDIGTGFGHLA   97 (291)
Q Consensus        24 i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~------~~~g~~~~~i~   97 (291)
                      |+|+.|.|+|++++++||+++|||++......+  .....++..  +  ...+.+........      ...+.+..|++
T Consensus         1 ~~Hi~i~V~D~e~s~~FY~~vLGf~~~~~~~~~--~~~~~~~~~--g--~~~l~l~~~~~~~~~~~~~~~~~~~g~~hia   74 (136)
T cd08342           1 FDHVEFYVGNAKQLASWFSTKLGFEPVAYHGSE--DKASYLLRQ--G--DINFVLNSPLNSFAPVADFLEKHGDGVCDVA   74 (136)
T ss_pred             CeEEEEEeCCHHHHHHHHHHhcCCeEEEecCCC--ceEEEEEEc--C--CEEEEEecCCCCCCchHHHHHhcCCceEEEE
Confidence            589999999999999999999999997754332  122333432  2  23455543222111      12456888999


Q ss_pred             EEECCHHHHHHHHHHcCCeeeeCCccCCCCceEEEEEECCCCcEEEEEecCCC
Q 022831           98 IATEDVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFELIQRGPT  150 (291)
Q Consensus        98 ~~v~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dP~G~~iel~~~~~~  150 (291)
                      |.|+|+++++++|+++|+++..+|...+++.+ .++++||+|+.|+|++.+..
T Consensus        75 ~~V~Dvda~~~~l~~~G~~v~~~p~~~~~~~~-~~~i~dp~G~~ie~~~~~~~  126 (136)
T cd08342          75 FRVDDAAAAYERAVARGAKPVQEPVEEPGELK-IAAIKGYGDSLHTLVDRKGY  126 (136)
T ss_pred             EEeCCHHHHHHHHHHcCCeEccCceecCCeEE-EEEEeccCCcEEEEEecCCC
Confidence            99999999999999999999988887666544 58899999999999998754

HppD and HmaS are non-heme iron-dependent dioxygenases, which modify a common substrate, 4-hydroxyphenylpyruvate (HPP), but yield different products. HPPD catalyzes the second reaction in tyrosine catabolism, the conversion of HPP to homogentisate (2,5-dihydroxyphenylacetic acid, HG). HmaS converts HPP to 4-hydroxymandelate, a committed step in the formation of hydroxyphenylglycerine, a structural component of nonproteinogenic macrocyclic peptide antibiotics, such as vancomycin. If the emphasis is on catalytic chemistry, HPPD and HmaS are classified as members of a large family of alpha-keto acid dependent mononuclear non-heme iron oxygenases most of which require Fe(II), molecular oxygen, and an alpha-keto acid (typically alpha-ketoglutarate) to either oxygenate or oxidize a third substrate. Both enzymes are exceptions in that they require two, instead of three, su

>cd07243 2_3_CTD_C C-terminal domain of catechol 2,3-dioxygenase

Probab=99.77  E-value=9.5e-18  Score=127.75  Aligned_cols=121  Identities=12%  Similarity=0.124  Sum_probs=85.5

Q ss_pred             CCCceeeeeeeCCchhhHHHHHHhcCCeeeeeccCcccce-eeeeeccCCCCcceEEEEeEecCceeeccCceeeEEEEE
Q 022831          151 PEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKC-ALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAIS  229 (291)
Q Consensus       151 ~~~~~hv~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~~hia~~  229 (291)
                      +.+++|++|.|+|++++.+||+++|||++..+...+++.. ...++..+..  ...+.+...       .+++++|+||.
T Consensus         4 ~~~l~Hv~l~v~Dle~s~~FY~~vLGf~~~~~~~~~~~~~~~~~~l~~~~~--~h~~~~~~~-------~~~~~~Hiaf~   74 (143)
T cd07243           4 AHRLDHCLLTGEDIAETTRFFTDVLDFYLAERVVDPDGGTRVGSFLSCSNK--PHDIAFVGG-------PDGKLHHFSFF   74 (143)
T ss_pred             CceeCEEEEecCCHHHHHHHHHHhcCCEEEEEEecCCCCeEEEEEEecCCC--cceEEEecC-------CCCCceEEEEE
Confidence            4679999999999999999999999999766643222211 2234432222  233333221       13578999999


Q ss_pred             ecChHHHHHHHHHHHHhhCCeeeecccccCCCCceEEEEECCCCCeEEEEec
Q 022831          230 TDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDN  281 (291)
Q Consensus       230 v~di~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iel~~~  281 (291)
                      |+|++++.+.. ++++++|+++..+|.++..++++++||+|||||+|||+..
T Consensus        75 v~d~~~l~~~~-~~l~~~Gv~i~~~p~~~~~~~~~~~yf~DPdG~~iEl~~~  125 (143)
T cd07243          75 LESWEDVLKAG-DIISMNDVSIDIGPTRHGITRGQTIYFFDPSGNRNETFAG  125 (143)
T ss_pred             cCCHHHHHHHH-HHHHHcCCceEECCcCCCCCCceEEEEECCCCCEEEEecC
Confidence            99988854333 2229999999888876654456789999999999999874

This subfamily contains the C-terminal, catalytic, domain of catechol 2,3-dioxygenase. Catechol 2,3-dioxygenase (2,3-CTD, catechol:oxygen 2,3-oxidoreductase) catalyzes an extradiol cleavage of catechol to form 2-hydroxymuconate semialdehyde with the insertion of two atoms of oxygen. The enzyme is a homotetramer and contains catalytically essential Fe(II) . The reaction proceeds by an ordered bi-unit mechanism. First, catechol binds to the enzyme, this is then followed by the binding of dioxygen to form a tertiary complex, and then the aromatic ring is cleaved to produce 2-hydroxymuconate semialdehyde. Catechol 2,3-dioxygenase belongs to the type I extradiol dioxygenase family. The subunit comprises the N- and C-terminal domains of similar structure fold, resulting from an ancient gene duplication. The active site is located in a funnel-shaped space of the C-terminal domain. This subfamily represents the C-terminal domain.

>cd08353 Glo_EDI_BRP_like_7 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.77  E-value=1.3e-17  Score=127.09  Aligned_cols=122  Identities=19%  Similarity=0.250  Sum_probs=88.8

Q ss_pred             CCceeeeeeeCCchhhHHHHHHhcCCeeeeeccCcc-----------cceeeeeeccCCCCcceEEEEeEecCcee----
Q 022831          152 EPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPE-----------LKCALAMLGYAEEDQTTVLELAYSYGVTE----  216 (291)
Q Consensus       152 ~~~~hv~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~l~l~~~~~~~~----  216 (291)
                      .+++|+.|.|+|++++.+||++ |||+........+           ....+.++..+  .....++|........    
T Consensus         2 ~~i~Hi~i~v~Dl~~s~~FY~~-LG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~--~g~~~iel~~~~~~~~~~~~   78 (142)
T cd08353           2 SRMDNVGIVVRDLEAAIAFFLE-LGLELEGRAEIEGEWADRVTGLDGVRVEIAMLRTP--DGHSRLELSKFHHPAVIADH   78 (142)
T ss_pred             ceeeeEEEEeCCHHHHHHHHHH-cCCEEccccccChHHHHHhcCCCCceEEEEEEeCC--CCCceEEEEEecCCCCcCcC
Confidence            3689999999999999999998 9998765432111           12344444422  2245677765322111    


Q ss_pred             ---eccCceeeEEEEEecChHHHHHHHHHHHHhhCCeeeecccccCCCCceEEEEECCCCCeEEEEec
Q 022831          217 ---YTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDN  281 (291)
Q Consensus       217 ---~~~~~g~~hia~~v~di~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iel~~~  281 (291)
                         ...+.|++|++|.|+|++++++++    +++|+++..+|...+ .+.+++|++||||+.|||+|.
T Consensus        79 ~~~~~~~~g~~hia~~v~d~d~~~~~l----~~~G~~~~~~~~~~~-~~~r~~~~~DPdG~~iEl~e~  141 (142)
T cd08353          79 RPAPVNALGLRRVMFAVDDIDARVARL----RKHGAELVGEVVQYE-NSYRLCYIRGPEGILIELAEQ  141 (142)
T ss_pred             CCCCCCCCCceEEEEEeCCHHHHHHHH----HHCCCceeCCceecC-CCeEEEEEECCCCCEEEeeec
Confidence               112458899999999999999999    999999987665444 357889999999999999984

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The structures of this family demonstrate domain swapping, which is shared by glyoxalase I and antibiotic resistance proteins.

>cd08360 MhqB_like_C C-terminal domain of Burkholderia sp

Probab=99.77  E-value=1.4e-17  Score=125.52  Aligned_cols=121  Identities=21%  Similarity=0.204  Sum_probs=90.3

Q ss_pred             CCCceeeeeeeCCchhhHHHHHHhcCCeeeeeccCcccceeeeeeccCCCCcceEEEEeEecCceeeccCceeeEEEEEe
Q 022831          151 PEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAIST  230 (291)
Q Consensus       151 ~~~~~hv~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~~hia~~v  230 (291)
                      |.++.|+.|.|+|++++++||+++||+++......     ...++..++...+..+.+.....     ...|++|++|.|
T Consensus         1 ~~~l~hi~l~v~dl~~s~~FY~~vlGl~~~~~~~~-----~~~~~~~~~~~~~~~i~l~~~~~-----~~~g~~hiaf~v   70 (134)
T cd08360           1 PRRLGHVVLFVPDVEAAEAFYRDRLGFRVSDRFKG-----RGAFLRAAGGGDHHNLFLIKTPA-----PMAGFHHAAFEV   70 (134)
T ss_pred             CceeeEEEEEcCCHHHHHHHHHHhcCCEEEEEecC-----cEEEEECCCCCCCcEEEEecCCC-----CCCcceEEEEEe
Confidence            46799999999999999999999999998655321     12344432222234555543211     136899999999


Q ss_pred             cChHHHHH---HHHHHHHhhCCeeeecccccCCCCceEEEEECCCCCeEEEEechhhh
Q 022831          231 DDVYKSAE---VVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNEDFL  285 (291)
Q Consensus       231 ~di~~~~~---~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~~~~  285 (291)
                      +|++++.+   +|    +++|+++...|.+++..+.+++||+||+|++|||+...+..
T Consensus        71 ~d~~~~~~~~~~l----~~~G~~~~~~~~~~~~~~~~~~y~~DP~G~~iEl~~~~~~~  124 (134)
T cd08360          71 GDIDEVMLGGNHM----LRAGYQTGWGPGRHRIGSNYFWYFRDPWGGEVEYGADMDYV  124 (134)
T ss_pred             CCHHHHHHHHHHH----HHcCCccccCCCCcCCCccEEEEEECCCCCEEEEEcccccc
Confidence            99888775   66    99999988888777765567799999999999999866554

NF100 MhqB and similar proteins; MhqB is a type I extradiol dioxygenase involved in the catabolism of methylhydroquinone, an intermediate in the degradation of fenitrothion. This subfamily contains the C-terminal, catalytic, domain of Burkholderia sp. NF100 MhqB and similar proteins. MhqB is a type I extradiol dioxygenase involved in the catabolism of methylhydroquinone, an intermediate in the degradation of fenitrothion. The purified enzyme has shown extradiol ring cleavage activity toward 3-methylcatechol. Fe2+ was suggested as a cofactor, the same as most other enzymes in the family. Burkholderia sp. NF100 MhqB is encoded on the plasmid pNF1. The type I family of extradiol dioxygenases contains two structurally homologous barrel-shaped domains at the N- and C-terminal. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism.

>cd07257 THT_oxygenase_C The C-terminal domain of 2,4,5-Trihydroxytoluene (THT) oxygenase, which is an extradiol dioxygenease in the 2,4-dinitrotoluene (DNT) degradation pathway

Probab=99.76  E-value=4e-18  Score=131.39  Aligned_cols=123  Identities=20%  Similarity=0.235  Sum_probs=89.4

Q ss_pred             CceeeeeeeCCchhhHHHHHHhcCCeeeeeccCc-ccceeeeeeccCCCC---cceEEEEeEecCceeeccCceeeEEEE
Q 022831          153 PLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSP-ELKCALAMLGYAEED---QTTVLELAYSYGVTEYTKGNAYAQVAI  228 (291)
Q Consensus       153 ~~~hv~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~-~~~~~~~~~~~~~~~---~~~~l~l~~~~~~~~~~~~~g~~hia~  228 (291)
                      +|+||.|.|+|++++++||+++||+++......+ .+.....++..++..   .+..+.+..       ..+++++|++|
T Consensus         1 ri~Hv~l~V~Dle~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~-------~~~~g~~Hiaf   73 (153)
T cd07257           1 RLGHVVLEVPDFAASFDWYTETFGLKPSDVIYLPGPGNPVAAFLRLDRGEEYVDHHTLALAQ-------GPESGVHHAAF   73 (153)
T ss_pred             CccEEEEecCCHHHHHHHHHHhcCCeEEeeEecCCCCCcEEEEEecCCCCCcccchHHHHhc-------CCCCceeEEEE
Confidence            4789999999999999999999999987654332 122334455432210   011112211       11468999999


Q ss_pred             EecChHHHH---HHHHHHHHhhCCeeeecccccCCCCceEEEEECCCCCeEEEEechhhhh
Q 022831          229 STDDVYKSA---EVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNEDFLK  286 (291)
Q Consensus       229 ~v~di~~~~---~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~~~~~  286 (291)
                      .|+|++++.   ++|    +++|+++.++|+++..+...++|++|||||.|||+......+
T Consensus        74 ~v~die~~~~~~~~L----~~~Gv~v~~~~g~~~~g~~~~~y~~DPdG~~iEl~~~~~~~~  130 (153)
T cd07257          74 EVHDFDAQGLGHDYL----REKGYEHVWGVGRHILGSQIFDYWFDPWGFIVEHYTDGDLVN  130 (153)
T ss_pred             EcCCHHHHHHHHHHH----HHCCCcEeecCCccCCCCCEEEEEECCCCCEEEEEcCceeEc
Confidence            999999987   677    999999999888877655667899999999999998765544

This subfamily contains the C-terminal, catalytic, domain of THT oxygenase. THT oxygenase is an extradiol dioxygenase in the 2,4-dinitrotoluene (DNT) degradation pathway. It catalyzes the conversion of 2,4,5-trihydroxytoluene to an unstable ring fission product, 2,4-dihydroxy-5-methyl-6-oxo-2,4-hexadienoic acid. The native protein was determined to be a dimer by gel filtration. The enzyme belongs to the type I family of extradiol dioxygenases which contains two structurally homologous barrel-shaped domains at the N- and C-terminus of each monomer. The active-site metal is located in the C-terminal barrel. Fe(II) is required for its catalytic activity.

>PRK04101 fosfomycin resistance protein FosB; Provisional

Probab=99.75  E-value=6.3e-17  Score=122.76  Aligned_cols=118  Identities=19%  Similarity=0.373  Sum_probs=87.3

Q ss_pred             CccceeeEEEEeCCHHHHHHHHHHhcCCEEEEEeccCCCceeeEEeeccCCCcceEEEeeecCCCCcccCCCCceEEEEE
Q 022831           20 DKRRLLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHLAIA   99 (291)
Q Consensus        20 ~~~~i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~g~~~~~i~~~   99 (291)
                      |+.+|.|+.|.|+|++++++||+++|||++..+..      ...++..+  +  ..+.+......+....+.+..|++|.
T Consensus         1 ~i~~i~hi~L~v~Dl~~s~~FY~~~lG~~~~~~~~------~~~~~~~~--g--~~l~l~~~~~~~~~~~~~~~~hiaf~   70 (139)
T PRK04101          1 MLKGINHICFSVSNLEKSIEFYEKVLGAKLLVKGR------KTAYFDLN--G--LWIALNEEKDIPRNEIHQSYTHIAFS   70 (139)
T ss_pred             CCCcEEEEEEEecCHHHHHHHHHhccCCEEEeecC------eeEEEecC--C--eEEEeeccCCCCCccCCCCeeEEEEE
Confidence            68899999999999999999999999999875422      14455443  2  23433322222222233467899999


Q ss_pred             EC--CHHHHHHHHHHcCCeeeeCCccCCCCceEEEEEECCCCcEEEEEecC
Q 022831          100 TE--DVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFELIQRG  148 (291)
Q Consensus       100 v~--d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dP~G~~iel~~~~  148 (291)
                      ++  |+++++++|+++|+++...+...+++.+ .+|++||+|+.|||.+..
T Consensus        71 v~~~dv~~~~~~l~~~G~~i~~~~~~~~~~~~-~~~~~DPdGn~iEl~~~~  120 (139)
T PRK04101         71 IEEEDFDHWYQRLKENDVNILPGRERDERDKK-SIYFTDPDGHKFEFHTGT  120 (139)
T ss_pred             ecHHHHHHHHHHHHHCCceEcCCccccCCCce-EEEEECCCCCEEEEEeCC
Confidence            98  9999999999999998766655555444 588999999999999765

>cd07241 Glo_EDI_BRP_like_3 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.75  E-value=4.3e-17  Score=121.12  Aligned_cols=118  Identities=25%  Similarity=0.389  Sum_probs=84.6

Q ss_pred             ceeeEEEEeCCHHHHHHHHHHhcCCEEEEEeccCCCceeeEEeeccCCCcceEEEeeecCCCCc---ccCCCCceEEEEE
Q 022831           23 RLLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTS---YDIGTGFGHLAIA   99 (291)
Q Consensus        23 ~i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~---~~~g~~~~~i~~~   99 (291)
                      +|+|+.|.|+|++++++||+++|||++......+..++...|+..++   ...+++.+......   .....|+.|+||.
T Consensus         1 ~~~Hi~l~v~dl~~s~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~~---~~~~~l~~~~~~~~~~~~~~~~g~~hi~f~   77 (125)
T cd07241           1 KIEHVAIWTKDLERMKAFYVTYFGATSNEKYHNPRKGFESYFLSFDD---GARLELMTRPDIAPSPNEGERTGWAHLAFS   77 (125)
T ss_pred             CceEEEEEecCHHHHHHHHHHHhCCEeeceEeCCCCCceEEEEecCC---CcEEEEEcCcccCCCcccCCCCceEEEEEE
Confidence            57999999999999999999999999865433333344455665532   23455554322111   1123478899999


Q ss_pred             EC---CHHHHHHHHHHcCCeeeeCCccCCCCceEEEEEECCCCcEEEE
Q 022831          100 TE---DVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFEL  144 (291)
Q Consensus       100 v~---d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dP~G~~iel  144 (291)
                      |+   |+++++++|+++|+++...|...++|.+. ++++||||+.|||
T Consensus        78 v~~~~~v~~~~~~l~~~g~~~~~~~~~~~~g~~~-~~~~DPdG~~iE~  124 (125)
T cd07241          78 VGSKEAVDELTERLRADGYLIIGEPRTTGDGYYE-SVILDPEGNRIEI  124 (125)
T ss_pred             CCCHHHHHHHHHHHHHCCCEEEeCceecCCCeEE-EEEECCCCCEEEe
Confidence            96   48999999999999988766555555443 6799999999997

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>cd07243 2_3_CTD_C C-terminal domain of catechol 2,3-dioxygenase

Probab=99.75  E-value=8.5e-17  Score=122.50  Aligned_cols=120  Identities=15%  Similarity=0.172  Sum_probs=85.2

Q ss_pred             CCccceeeEEEEeCCHHHHHHHHHHhcCCEEEEEeccCCCce-eeEEeeccCCCcceEEEeeecCCCCcccCCCCceEEE
Q 022831           19 KDKRRLLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKY-SNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHLA   97 (291)
Q Consensus        19 ~~~~~i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~l~~~~~~~~~~~g~~~~~i~   97 (291)
                      +.+++|+||+|.|+|++++.+||+++|||++..+...+++.. ...|+..+. .. ..+.+...       .+.++.|+|
T Consensus         2 ~~~~~l~Hv~l~v~Dle~s~~FY~~vLGf~~~~~~~~~~~~~~~~~~l~~~~-~~-h~~~~~~~-------~~~~~~Hia   72 (143)
T cd07243           2 IGAHRLDHCLLTGEDIAETTRFFTDVLDFYLAERVVDPDGGTRVGSFLSCSN-KP-HDIAFVGG-------PDGKLHHFS   72 (143)
T ss_pred             CCCceeCEEEEecCCHHHHHHHHHHhcCCEEEEEEecCCCCeEEEEEEecCC-Cc-ceEEEecC-------CCCCceEEE
Confidence            457899999999999999999999999999876543333322 234554332 22 22333221       124789999


Q ss_pred             EEECCHHH---HHHHHHHcCCeeeeCCccCCCCceEEEEEECCCCcEEEEEec
Q 022831           98 IATEDVYK---MVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFELIQR  147 (291)
Q Consensus        98 ~~v~d~~~---~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dP~G~~iel~~~  147 (291)
                      |+|+|+++   +.++|.++|+++...|.....+...++||+||+|+.|||...
T Consensus        73 f~v~d~~~l~~~~~~l~~~Gv~i~~~p~~~~~~~~~~~yf~DPdG~~iEl~~~  125 (143)
T cd07243          73 FFLESWEDVLKAGDIISMNDVSIDIGPTRHGITRGQTIYFFDPSGNRNETFAG  125 (143)
T ss_pred             EEcCCHHHHHHHHHHHHHcCCceEECCcCCCCCCceEEEEECCCCCEEEEecC
Confidence            99999877   568999999998766654432233458999999999999764

This subfamily contains the C-terminal, catalytic, domain of catechol 2,3-dioxygenase. Catechol 2,3-dioxygenase (2,3-CTD, catechol:oxygen 2,3-oxidoreductase) catalyzes an extradiol cleavage of catechol to form 2-hydroxymuconate semialdehyde with the insertion of two atoms of oxygen. The enzyme is a homotetramer and contains catalytically essential Fe(II) . The reaction proceeds by an ordered bi-unit mechanism. First, catechol binds to the enzyme, this is then followed by the binding of dioxygen to form a tertiary complex, and then the aromatic ring is cleaved to produce 2-hydroxymuconate semialdehyde. Catechol 2,3-dioxygenase belongs to the type I extradiol dioxygenase family. The subunit comprises the N- and C-terminal domains of similar structure fold, resulting from an ancient gene duplication. The active site is located in a funnel-shaped space of the C-terminal domain. This subfamily represents the C-terminal domain.

>cd08352 Glo_EDI_BRP_like_1 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.75  E-value=8.5e-17  Score=119.40  Aligned_cols=122  Identities=26%  Similarity=0.347  Sum_probs=84.6

Q ss_pred             ccceeeEEEEeCCHHHHHHHHHHhcCCEEEEEeccCCCceeeEEeeccCCCcceEEEeeecCC--CC-cccCCCCceEEE
Q 022831           21 KRRLLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYG--VT-SYDIGTGFGHLA   97 (291)
Q Consensus        21 ~~~i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~--~~-~~~~g~~~~~i~   97 (291)
                      +.+|+|++|.|+|++++.+||+++|||++......++.......+.. +..  ..+++.....  .. ....+.+..|++
T Consensus         1 ~~~~~hi~l~v~d~~~a~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~-~~~--~~i~l~~~~~~~~~~~~~~~~g~~h~~   77 (125)
T cd08352           1 LFGIHHVAIICSDYEKSKEFYVEILGFKVIREVYRPERGSYKLDLLL-NGG--YQLELFSFPNPPERPSYPEACGLRHLA   77 (125)
T ss_pred             CCccceEEEEcCCHHHHHHHHHHhcCCEEeeeeecCCCCcEEEEEec-CCC--cEEEEEEcCCCCCCCCCCcCCCceEEE
Confidence            36899999999999999999999999998765332221111122222 112  2344433211  11 112345788999


Q ss_pred             EEECCHHHHHHHHHHcCCeeeeCCccCCCCceEEEEEECCCCcEEEEEe
Q 022831           98 IATEDVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFELIQ  146 (291)
Q Consensus        98 ~~v~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dP~G~~iel~~  146 (291)
                      |.|+|+++++++|+++|+++...+....++.+ ++|++||+|+.|||+|
T Consensus        78 ~~v~d~~~~~~~l~~~G~~~~~~~~~~~~~~~-~~~~~DP~G~~iEl~~  125 (125)
T cd08352          78 FSVEDIEAAVKHLKAKGVEVEPIRVDEFTGKR-FTFFYDPDGLPLELYE  125 (125)
T ss_pred             EEeCCHHHHHHHHHHcCCccccccccCCCceE-EEEEECCCCCEEEecC
Confidence            99999999999999999998765544444443 5889999999999975

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>cd07257 THT_oxygenase_C The C-terminal domain of 2,4,5-Trihydroxytoluene (THT) oxygenase, which is an extradiol dioxygenease in the 2,4-dinitrotoluene (DNT) degradation pathway

Probab=99.74  E-value=4.8e-17  Score=125.35  Aligned_cols=119  Identities=27%  Similarity=0.359  Sum_probs=86.7

Q ss_pred             ceeeEEEEeCCHHHHHHHHHHhcCCEEEEEeccC-CCceeeEEeeccCCCcc---eEEEeeecCCCCcccCCCCceEEEE
Q 022831           23 RLLHAVYRVGDLDRTIKYYTECFGMELLRKRDVP-EEKYSNAFLGFGPEQSY---FVVELTYNYGVTSYDIGTGFGHLAI   98 (291)
Q Consensus        23 ~i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~-~~~~~~~~~~~~~~~~~---~~l~l~~~~~~~~~~~g~~~~~i~~   98 (291)
                      +|+||+|.|+|++++++||+++|||++......+ .+.....++..+.....   ..+.+..       ..+.++.||||
T Consensus         1 ri~Hv~l~V~Dle~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~-------~~~~g~~Hiaf   73 (153)
T cd07257           1 RLGHVVLEVPDFAASFDWYTETFGLKPSDVIYLPGPGNPVAAFLRLDRGEEYVDHHTLALAQ-------GPESGVHHAAF   73 (153)
T ss_pred             CccEEEEecCCHHHHHHHHHHhcCCeEEeeEecCCCCCcEEEEEecCCCCCcccchHHHHhc-------CCCCceeEEEE
Confidence            5899999999999999999999999987654433 23334566655321100   0111111       11458999999


Q ss_pred             EECCHHHHH---HHHHHcCCeeeeCCccCCCCceEEEEEECCCCcEEEEEecC
Q 022831           99 ATEDVYKMV---ENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFELIQRG  148 (291)
Q Consensus        99 ~v~d~~~~~---~~l~~~G~~~~~~~~~~~~g~~~~~~~~dP~G~~iel~~~~  148 (291)
                      .|+|++++.   ++|+++|+++...++....+...++|++||+|+.|||....
T Consensus        74 ~v~die~~~~~~~~L~~~Gv~v~~~~g~~~~g~~~~~y~~DPdG~~iEl~~~~  126 (153)
T cd07257          74 EVHDFDAQGLGHDYLREKGYEHVWGVGRHILGSQIFDYWFDPWGFIVEHYTDG  126 (153)
T ss_pred             EcCCHHHHHHHHHHHHHCCCcEeecCCccCCCCCEEEEEECCCCCEEEEEcCc
Confidence            999999986   99999999988766665555555789999999999999765

This subfamily contains the C-terminal, catalytic, domain of THT oxygenase. THT oxygenase is an extradiol dioxygenase in the 2,4-dinitrotoluene (DNT) degradation pathway. It catalyzes the conversion of 2,4,5-trihydroxytoluene to an unstable ring fission product, 2,4-dihydroxy-5-methyl-6-oxo-2,4-hexadienoic acid. The native protein was determined to be a dimer by gel filtration. The enzyme belongs to the type I family of extradiol dioxygenases which contains two structurally homologous barrel-shaped domains at the N- and C-terminus of each monomer. The active-site metal is located in the C-terminal barrel. Fe(II) is required for its catalytic activity.

>TIGR03645 glyox_marine lactoylglutathione lyase family protein

Probab=99.74  E-value=5.4e-17  Score=126.18  Aligned_cols=127  Identities=20%  Similarity=0.197  Sum_probs=88.1

Q ss_pred             CCCceeeeeeeCCchhhHHHHHHhcCCeeeeec----cC--------------cccceeeeeeccCCCCcceEEEEeEec
Q 022831          151 PEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTI----DS--------------PELKCALAMLGYAEEDQTTVLELAYSY  212 (291)
Q Consensus       151 ~~~~~hv~l~v~D~~~~~~Fy~~~lG~~~~~~~----~~--------------~~~~~~~~~~~~~~~~~~~~l~l~~~~  212 (291)
                      +.+++||.|.|+|++++.+||+++|||++..+.    ..              ....+.+.++..++   ...|+|....
T Consensus         2 ~~~i~Hv~i~V~Dle~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~---~~~ieL~~~~   78 (162)
T TIGR03645         2 PRTFSHIGISVPDLDAAVKFYTEVLGWYLIMPPTEIVEDDSAIGEMCTDVFGEGWGSFKIAHLSTGD---RIGVELFEFK   78 (162)
T ss_pred             CceEEEEEEEeCCHHHHHHHHHHhcCCEEEeccccccCCCCCCCchhhHHhCCCcceeeEEEEecCC---CCcEEEEecc
Confidence            356899999999999999999999999864210    10              01124455555332   3447776643


Q ss_pred             Ccee-e----ccCceeeEEEEEecChHHHHHHHHHHHHhhCCeeeeccccc--CC-CCceEEEEECCCCCeEEEEechhh
Q 022831          213 GVTE-Y----TKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPI--PG-LNTKITSFVDPDGWKTVLVDNEDF  284 (291)
Q Consensus       213 ~~~~-~----~~~~g~~hia~~v~di~~~~~~l~~~~~~~G~~~~~~p~~~--~~-~~~~~~~~~DPdG~~iel~~~~~~  284 (291)
                      +... .    ..+.|+.|++|.|+|++++++++    +++|+++..++.+.  ++ .+.+++|++|||||.|||+++..-
T Consensus        79 ~~~~~~~~~~~~~~g~~Hla~~v~dida~~~~l----~~~G~~~~~~~~~~~~~~~~~~~~~~~~DPdG~~iEl~~~~~~  154 (162)
T TIGR03645        79 NQENPEDNFEYWKTGVFHFCVQDPDVEGLAERI----VAAGGKKRMPVPRYYYPGEKPYRMIYMEDPFGNILEIYSHSYE  154 (162)
T ss_pred             CCCCCCcccccccccceEEEEEcCCHHHHHHHH----HHcCCcccCCCccccCCCCCceEEEEEECCCCCEEEEEEcChh
Confidence            3211 1    12468999999999999999999    99998765433221  11 123789999999999999997643

Members of this protein family share homology with lactoylglutathione lyase (glyoxalase I) and are found mainly in marine members of the gammaproteobacteria, including CPS_0532 from Colwellia psychrerythraea 34H. This family excludes a well-separated, more narrowly distributed paralogous family, exemplified by CPS_3492 from C. psychrerythraea. The function is of this protein family is unknown.

>cd08360 MhqB_like_C C-terminal domain of Burkholderia sp

Probab=99.74  E-value=1.7e-16  Score=119.56  Aligned_cols=117  Identities=22%  Similarity=0.259  Sum_probs=85.9

Q ss_pred             cceeeEEEEeCCHHHHHHHHHHhcCCEEEEEeccCCCceeeEEeeccCCCcceEEEeeecCCCCcccCCCCceEEEEEEC
Q 022831           22 RRLLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHLAIATE  101 (291)
Q Consensus        22 ~~i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~g~~~~~i~~~v~  101 (291)
                      .+|+|+.|.|+|++++++||+++|||++.....  .   ...++..+.......+.+.....     ...++.|++|.|+
T Consensus         2 ~~l~hi~l~v~dl~~s~~FY~~vlGl~~~~~~~--~---~~~~~~~~~~~~~~~i~l~~~~~-----~~~g~~hiaf~v~   71 (134)
T cd08360           2 RRLGHVVLFVPDVEAAEAFYRDRLGFRVSDRFK--G---RGAFLRAAGGGDHHNLFLIKTPA-----PMAGFHHAAFEVG   71 (134)
T ss_pred             ceeeEEEEEcCCHHHHHHHHHHhcCCEEEEEec--C---cEEEEECCCCCCCcEEEEecCCC-----CCCcceEEEEEeC
Confidence            579999999999999999999999999875432  1   14455543222233444443211     1358899999999


Q ss_pred             CHHHHH---HHHHHcCCeeeeCCccCCCCceEEEEEECCCCcEEEEEecC
Q 022831          102 DVYKMV---ENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFELIQRG  148 (291)
Q Consensus       102 d~~~~~---~~l~~~G~~~~~~~~~~~~g~~~~~~~~dP~G~~iel~~~~  148 (291)
                      |++++.   ++|.++|+++...+...+.+...++|++||+|+.|||....
T Consensus        72 d~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~y~~DP~G~~iEl~~~~  121 (134)
T cd08360          72 DIDEVMLGGNHMLRAGYQTGWGPGRHRIGSNYFWYFRDPWGGEVEYGADM  121 (134)
T ss_pred             CHHHHHHHHHHHHHcCCccccCCCCcCCCccEEEEEECCCCCEEEEEccc
Confidence            988776   59999999987666555544455689999999999999754

NF100 MhqB and similar proteins; MhqB is a type I extradiol dioxygenase involved in the catabolism of methylhydroquinone, an intermediate in the degradation of fenitrothion. This subfamily contains the C-terminal, catalytic, domain of Burkholderia sp. NF100 MhqB and similar proteins. MhqB is a type I extradiol dioxygenase involved in the catabolism of methylhydroquinone, an intermediate in the degradation of fenitrothion. The purified enzyme has shown extradiol ring cleavage activity toward 3-methylcatechol. Fe2+ was suggested as a cofactor, the same as most other enzymes in the family. Burkholderia sp. NF100 MhqB is encoded on the plasmid pNF1. The type I family of extradiol dioxygenases contains two structurally homologous barrel-shaped domains at the N- and C-terminal. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism.

>PRK11478 putative lyase; Provisional

Probab=99.74  E-value=5.3e-17  Score=121.48  Aligned_cols=120  Identities=20%  Similarity=0.169  Sum_probs=83.1

Q ss_pred             CCceeeeeeeCCchhhHHHHHHhcCCeeeeeccCcc-cceeeeeeccCCCCcceEEEEeEecCce---eeccCceeeEEE
Q 022831          152 EPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPE-LKCALAMLGYAEEDQTTVLELAYSYGVT---EYTKGNAYAQVA  227 (291)
Q Consensus       152 ~~~~hv~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~l~~~~~~~---~~~~~~g~~hia  227 (291)
                      .+++|+.|.|+|++++.+||+++|||++......++ ..+.. .+...+   ...+++.......   ..+...|+.|++
T Consensus         5 ~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~-~~~~~~---~~~l~l~~~~~~~~~~~~~~~~g~~hi~   80 (129)
T PRK11478          5 KQVHHIAIIATDYAVSKAFYCDILGFTLQSEVYREARDSWKG-DLALNG---QYVIELFSFPFPPERPSRPEACGLRHLA   80 (129)
T ss_pred             ceecEEEEEcCCHHHHHHHHHHHhCCEeccccccccccccee-eEecCC---CcEEEEEEecCCCCCCCCCCCCceeEEE
Confidence            468999999999999999999999999764321111 11111 111111   3456665422111   111235789999


Q ss_pred             EEecChHHHHHHHHHHHHhhCCeeeecccccCCCCceEEEEECCCCCeEEEEe
Q 022831          228 ISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVD  280 (291)
Q Consensus       228 ~~v~di~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iel~~  280 (291)
                      |.|+|++++++++    +++|+++...+. .+..+.+++||+|||||.|||++
T Consensus        81 f~v~d~~~~~~~l----~~~G~~~~~~~~-~~~~g~~~~~~~DPdG~~iEl~~  128 (129)
T PRK11478         81 FSVDDIDAAVAHL----ESHNVKCEAIRV-DPYTQKRFTFFNDPDGLPLELYE  128 (129)
T ss_pred             EEeCCHHHHHHHH----HHcCCeeecccc-CCCCCCEEEEEECCCCCEEEEEe
Confidence            9999999999999    999999864332 23335688999999999999987

>cd07265 2_3_CTD_N N-terminal domain of catechol 2,3-dioxygenase

Probab=99.73  E-value=1.7e-16  Score=117.60  Aligned_cols=117  Identities=23%  Similarity=0.245  Sum_probs=83.3

Q ss_pred             CccceeeEEEEeCCHHHHHHHHHHhcCCEEEEEeccCCCceeeEEeeccCCCcceEEEeeecCCCCcccCCCCceEEEEE
Q 022831           20 DKRRLLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHLAIA   99 (291)
Q Consensus        20 ~~~~i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~g~~~~~i~~~   99 (291)
                      .+++|+|+.|.|+|++++++||+++|||++.....  ++   ..++..........+.+...       ...+..|++|.
T Consensus         1 ~~~~l~hv~l~v~Dl~~s~~FY~~~lG~~~~~~~~--~~---~~~~~~~~~~~~~~~~l~~~-------~~~~~~hiaf~   68 (122)
T cd07265           1 GVLRPGHVQLRVLDLEEAIKHYREVLGLDEVGRDD--QG---RVYLKAWDEFDHHSIVLREA-------DTAGLDFMGFK   68 (122)
T ss_pred             CcceEeEEEEEeCCHHHHHHHHHhccCCEeeeecC--Cc---eEEEEccCCCcccEEEeccC-------CCCCeeEEEEE
Confidence            36899999999999999999999999999875421  11   23444321122233433221       12367899999


Q ss_pred             EC---CHHHHHHHHHHcCCeeeeCCccCCCCceEEEEEECCCCcEEEEEecC
Q 022831          100 TE---DVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFELIQRG  148 (291)
Q Consensus       100 v~---d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dP~G~~iel~~~~  148 (291)
                      |+   |+++++++|.++|+++...|.....+....+||+||+||.||+....
T Consensus        69 v~~~~dv~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~DPdG~~iE~~~~~  120 (122)
T cd07265          69 VLDDADLEKLEARLQAYGVAVERIPAGELPGVGRRVRFQLPSGHTMELYADK  120 (122)
T ss_pred             eCCHHHHHHHHHHHHHCCCcEEEcccCCCCCCceEEEEECCCCCEEEEEEec
Confidence            97   79999999999999987654433333333589999999999998754

This subfamily contains the N-terminal, non-catalytic, domain of catechol 2,3-dioxygenase. Catechol 2,3-dioxygenase (2,3-CTD, catechol:oxygen 2,3-oxidoreductase) catalyzes an extradiol cleavage of catechol to form 2-hydroxymuconate semialdehyde with the insertion of two atoms of oxygen. The enzyme is a homotetramer and contains catalytically essential Fe(II) . The reaction proceeds by an ordered bi-unit mechanism. First, catechol binds to the enzyme, this is then followed by the binding of dioxygen to form a tertiary complex, and then the aromatic ring is cleaved to produce 2-hydroxymuconate semialdehyde. Catechol 2,3-dioxygenase belongs to the type I extradiol dioxygenase family. The subunit comprises the N- and C-terminal domains of similar structure fold, resulting from an ancient gene duplication. The active site is located in a funnel-shaped space of the C-terminal domain. This subfamily represents the N-terminal do

>TIGR03645 glyox_marine lactoylglutathione lyase family protein

Probab=99.73  E-value=1.7e-16  Score=123.34  Aligned_cols=124  Identities=28%  Similarity=0.337  Sum_probs=84.8

Q ss_pred             cceeeEEEEeCCHHHHHHHHHHhcCCEEEEEec--cC----------------CCceeeEEeeccCCCcceEEEeeecCC
Q 022831           22 RRLLHAVYRVGDLDRTIKYYTECFGMELLRKRD--VP----------------EEKYSNAFLGFGPEQSYFVVELTYNYG   83 (291)
Q Consensus        22 ~~i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~--~~----------------~~~~~~~~~~~~~~~~~~~l~l~~~~~   83 (291)
                      ++|+||.|.|+|++++++||+++|||++..+..  ..                ...+..+++..+.   ...+++.+...
T Consensus         3 ~~i~Hv~i~V~Dle~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~---~~~ieL~~~~~   79 (162)
T TIGR03645         3 RTFSHIGISVPDLDAAVKFYTEVLGWYLIMPPTEIVEDDSAIGEMCTDVFGEGWGSFKIAHLSTGD---RIGVELFEFKN   79 (162)
T ss_pred             ceEEEEEEEeCCHHHHHHHHHHhcCCEEEeccccccCCCCCCCchhhHHhCCCcceeeEEEEecCC---CCcEEEEeccC
Confidence            579999999999999999999999998853210  00                0123445554332   23366665432


Q ss_pred             CC-cc----cCCCCceEEEEEECCHHHHHHHHHHcCCeeeeCC-ccC-CC-CceEEEEEECCCCcEEEEEecC
Q 022831           84 VT-SY----DIGTGFGHLAIATEDVYKMVENIRAKGGNVTREP-GPL-KG-MTTHFAFVKDPDGYIFELIQRG  148 (291)
Q Consensus        84 ~~-~~----~~g~~~~~i~~~v~d~~~~~~~l~~~G~~~~~~~-~~~-~~-g~~~~~~~~dP~G~~iel~~~~  148 (291)
                      .. +.    ..+.|..|+||.|+|+++++++|+++|+++...+ ... ++ ....++|++||||+.|||++..
T Consensus        80 ~~~~~~~~~~~~~g~~Hla~~v~dida~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~~DPdG~~iEl~~~~  152 (162)
T TIGR03645        80 QENPEDNFEYWKTGVFHFCVQDPDVEGLAERIVAAGGKKRMPVPRYYYPGEKPYRMIYMEDPFGNILEIYSHS  152 (162)
T ss_pred             CCCCCcccccccccceEEEEEcCCHHHHHHHHHHcCCcccCCCccccCCCCCceEEEEEECCCCCEEEEEEcC
Confidence            21 11    1246899999999999999999999998754322 111 11 1124689999999999999875

Members of this protein family share homology with lactoylglutathione lyase (glyoxalase I) and are found mainly in marine members of the gammaproteobacteria, including CPS_0532 from Colwellia psychrerythraea 34H. This family excludes a well-separated, more narrowly distributed paralogous family, exemplified by CPS_3492 from C. psychrerythraea. The function is of this protein family is unknown.

>cd07241 Glo_EDI_BRP_like_3 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.73  E-value=6.1e-17  Score=120.27  Aligned_cols=119  Identities=19%  Similarity=0.248  Sum_probs=83.8

Q ss_pred             CceeeeeeeCCchhhHHHHHHhcCCeeeeeccCcccceeeeeeccCCCCcceEEEEeEecCcee---eccCceeeEEEEE
Q 022831          153 PLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTE---YTKGNAYAQVAIS  229 (291)
Q Consensus       153 ~~~hv~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~---~~~~~g~~hia~~  229 (291)
                      ++.|+.|.|+|++++.+||+++|||++......+...+...++..++   ...+++........   ....+|+.|++|.
T Consensus         1 ~~~Hi~l~v~dl~~s~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~~---~~~~~l~~~~~~~~~~~~~~~~g~~hi~f~   77 (125)
T cd07241           1 KIEHVAIWTKDLERMKAFYVTYFGATSNEKYHNPRKGFESYFLSFDD---GARLELMTRPDIAPSPNEGERTGWAHLAFS   77 (125)
T ss_pred             CceEEEEEecCHHHHHHHHHHHhCCEeeceEeCCCCCceEEEEecCC---CcEEEEEcCcccCCCcccCCCCceEEEEEE
Confidence            47899999999999999999999999755433222334445555432   34566654322111   1123588999999


Q ss_pred             ecC---hHHHHHHHHHHHHhhCCeeeecccccCCCCceEEEEECCCCCeEEEE
Q 022831          230 TDD---VYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLV  279 (291)
Q Consensus       230 v~d---i~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iel~  279 (291)
                      |+|   ++++++++    +++|+++..+|...+. +.+.++++|||||.|||.
T Consensus        78 v~~~~~v~~~~~~l----~~~g~~~~~~~~~~~~-g~~~~~~~DPdG~~iE~~  125 (125)
T cd07241          78 VGSKEAVDELTERL----RADGYLIIGEPRTTGD-GYYESVILDPEGNRIEIT  125 (125)
T ss_pred             CCCHHHHHHHHHHH----HHCCCEEEeCceecCC-CeEEEEEECCCCCEEEeC
Confidence            964   78888888    9999999887754433 345578999999999983

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>cd07258 PpCmtC_C C-terminal domain of 2,3-dihydroxy-p-cumate-3,4-dioxygenase (PpCmtC)

Probab=99.72  E-value=9.9e-17  Score=121.63  Aligned_cols=116  Identities=14%  Similarity=0.214  Sum_probs=86.2

Q ss_pred             eeeeeeeCCchhhHHHHHHhcCCeeeeeccCcccceeeeeeccCCCCcceEEEEeEecCceeeccCceeeEEEEEecChH
Q 022831          155 CQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAISTDDVY  234 (291)
Q Consensus       155 ~hv~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~~hia~~v~di~  234 (291)
                      .||.|.|+|++++.+||+++|||++..+...     ...++...+...+..+.+..       ....+++|++|.|+|++
T Consensus         1 ~Hv~l~V~Dle~s~~Fy~~vLG~~~~~~~~~-----~~~~l~~~~~~~~h~~~~~~-------~~~~gl~Hiaf~v~~~~   68 (141)
T cd07258           1 GHVVIGSENFEASRDSLVEDFGFRVSDLIED-----RIVFMRCHPNPFHHTFAVGP-------ASSSHFHHVNFMVTDID   68 (141)
T ss_pred             CcEEEecCCHHHHHHHHHhcCCCEeeeeeCC-----EEEEEEcCCCCCcceeeecc-------CCCCceEEEEEECCCHH
Confidence            4899999999999999999999998766421     23344422222233443321       12468999999998755


Q ss_pred             ---HHHHHHHHHHHhhCCeeeecccccCCCCceEEEEECCCCCeEEEEechhhhh
Q 022831          235 ---KSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNEDFLK  286 (291)
Q Consensus       235 ---~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~~~~~  286 (291)
                         ++++++    +++|+++..+|++++..+.+++|++||+|+.|||+......+
T Consensus        69 ~v~~~~~~l----~~~G~~~~~~p~~~~~~~~~~~y~~DPdG~~iE~~~~~~~~~  119 (141)
T cd07258          69 DIGKALYRI----KAHDVKVVFGPGRHPPSDSIFFYFLDPDGITVEYSFGMEEFA  119 (141)
T ss_pred             HHHHHHHHH----HHCCCcEEeCCceECCCCCEEEEEECCCCCEEEEEeCcceec
Confidence               456666    999999999998877666788999999999999998766554

This subfamily contains the C-terminal, catalytic, domain of PpCmtC. 2,3-dihydroxy-p-cumate-3,4-dioxygenase (CmtC of Pseudomonas putida F1) is a dioxygenase involved in the eight-step catabolism pathway of p-cymene. CmtC acts upon the reaction intermediate 2,3-dihydroxy-p-cumate, yielding 2-hydroxy-3-carboxy-6-oxo-7-methylocta-2,4-dienoate. The CmtC belongs to the type I family of extradiol dioxygenases. Fe2+ was suggested as a cofactor, same as for other enzymes in the family. The type I family of extradiol dioxygenases contains two structurally homologous barrel-shaped domains at the N- and C-terminal. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism.

>cd07265 2_3_CTD_N N-terminal domain of catechol 2,3-dioxygenase

Probab=99.72  E-value=1.6e-16  Score=117.73  Aligned_cols=116  Identities=22%  Similarity=0.193  Sum_probs=82.7

Q ss_pred             CCceeeeeeeCCchhhHHHHHHhcCCeeeeeccCcccceeeeeeccCCCCcceEEEEeEecCceeeccCceeeEEEEEec
Q 022831          152 EPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAISTD  231 (291)
Q Consensus       152 ~~~~hv~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~~hia~~v~  231 (291)
                      .++.|+.|.|+|++++.+||+++|||+......  ++  .. ++...+...+..+.+..       ...+++.|++|.|+
T Consensus         3 ~~l~hv~l~v~Dl~~s~~FY~~~lG~~~~~~~~--~~--~~-~~~~~~~~~~~~~~l~~-------~~~~~~~hiaf~v~   70 (122)
T cd07265           3 LRPGHVQLRVLDLEEAIKHYREVLGLDEVGRDD--QG--RV-YLKAWDEFDHHSIVLRE-------ADTAGLDFMGFKVL   70 (122)
T ss_pred             ceEeEEEEEeCCHHHHHHHHHhccCCEeeeecC--Cc--eE-EEEccCCCcccEEEecc-------CCCCCeeEEEEEeC
Confidence            568999999999999999999999999765431  11  12 22211111223444422       11357899999997


Q ss_pred             ---ChHHHHHHHHHHHHhhCCeeeecccccCCCCceEEEEECCCCCeEEEEechh
Q 022831          232 ---DVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNED  283 (291)
Q Consensus       232 ---di~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~~  283 (291)
                         |++++++++    +++|+++...|.......++.+||+|||||+||+++..+
T Consensus        71 ~~~dv~~~~~~l----~~~G~~~~~~~~~~~~~~~~~~~~~DPdG~~iE~~~~~~  121 (122)
T cd07265          71 DDADLEKLEARL----QAYGVAVERIPAGELPGVGRRVRFQLPSGHTMELYADKE  121 (122)
T ss_pred             CHHHHHHHHHHH----HHCCCcEEEcccCCCCCCceEEEEECCCCCEEEEEEecc
Confidence               688888888    999999887665433333578999999999999998654

This subfamily contains the N-terminal, non-catalytic, domain of catechol 2,3-dioxygenase. Catechol 2,3-dioxygenase (2,3-CTD, catechol:oxygen 2,3-oxidoreductase) catalyzes an extradiol cleavage of catechol to form 2-hydroxymuconate semialdehyde with the insertion of two atoms of oxygen. The enzyme is a homotetramer and contains catalytically essential Fe(II) . The reaction proceeds by an ordered bi-unit mechanism. First, catechol binds to the enzyme, this is then followed by the binding of dioxygen to form a tertiary complex, and then the aromatic ring is cleaved to produce 2-hydroxymuconate semialdehyde. Catechol 2,3-dioxygenase belongs to the type I extradiol dioxygenase family. The subunit comprises the N- and C-terminal domains of similar structure fold, resulting from an ancient gene duplication. The active site is located in a funnel-shaped space of the C-terminal domain. This subfamily represents the N-terminal do

>cd07256 HPCD_C_class_II C-terminal domain of 3,4-dihydroxyphenylacetate 2,3-dioxygenase (HPCD), which catalyses the second step in the degradation of 4-hydroxyphenylacetate to succinate and pyruvate; belongs to the type I class II family of extradiol dioxygenases

Probab=99.72  E-value=1.7e-16  Score=123.32  Aligned_cols=120  Identities=21%  Similarity=0.295  Sum_probs=82.9

Q ss_pred             CCCceeeeeeeCCchhhHHHHHHhcCCeeeeeccCcccceeeeeeccCCCCcceEEEEeEecCceeeccCceeeEEEEEe
Q 022831          151 PEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAIST  230 (291)
Q Consensus       151 ~~~~~hv~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~~hia~~v  230 (291)
                      |.+|+|+.|.|+|++++.+||+++|||++......+++.....++...+.  ...+.+..       ..+++++|++|.|
T Consensus         1 ~~~l~Hv~l~V~Dl~~s~~FY~~vLGl~~~~~~~~~~~~~~~~~l~~~~~--~~~i~l~~-------~~~~~~~Hiaf~v   71 (161)
T cd07256           1 PQRLDHFNLRVPDVDAGLAYYRDELGFRVSEYTEDDDGTTWAAWLHRKGG--VHDTALTG-------GNGPRLHHVAFWV   71 (161)
T ss_pred             CceEEEEEEecCCHHHHHHHHHhccCCEEEEEeccCCCcEEEEEEecCCC--cceEEEec-------CCCCceeEEEEEc
Confidence            56799999999999999999999999998654332222223334432221  23344322       1245889999999


Q ss_pred             cC---hHHHHHHHHHHHHhhCCe--eeecccccCCCCceEEEEECCCCCeEEEEechh
Q 022831          231 DD---VYKSAEVVNLVTQELGGK--ITRQPGPIPGLNTKITSFVDPDGWKTVLVDNED  283 (291)
Q Consensus       231 ~d---i~~~~~~l~~~~~~~G~~--~~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~~  283 (291)
                      +|   +++++++|    +++|+.  +..+|+++...+.+++|++|||||.|||++...
T Consensus        72 ~~~~~v~~~~~~L----~~~G~~~~~~~~p~~~g~~~~~~~y~~DPdG~~iEl~~~~~  125 (161)
T cd07256          72 PEPHNIIRTCDLL----AAAGYSDRIERGPGRHGISNAFFLYLRDPDGHRIEIYTGDY  125 (161)
T ss_pred             CCHHHHHHHHHHH----HHcCCCcccccCCCccCCCCceEEEEECCCCCeEEEeecCc
Confidence            87   55566666    999986  334555544445678999999999999997543

This subfamily contains the C-terminal, catalytic, domain of HPCD. HPCD catalyses the second step in the degradation of 4-hydroxyphenylacetate to succinate and pyruvate. The aromatic ring of 4-hydroxyphenylacetate is opened by this dioxygenase to yield the 3,4-diol product, 2-hydroxy-5-carboxymethylmuconate semialdehyde. HPCD is a homotetramer and each monomer contains two structurally homologous barrel-shaped domains at the N- and C-terminus. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism. Most extradiol dioxygenases contain Fe(II) in their active site, but HPCD can be activated by either Mn(II) or Fe(II). These enzymes belong to the type I class II family of

>TIGR03081 metmalonyl_epim methylmalonyl-CoA epimerase

Probab=99.71  E-value=1.1e-16  Score=119.45  Aligned_cols=119  Identities=23%  Similarity=0.360  Sum_probs=84.9

Q ss_pred             CceeeeeeeCCchhhHHHHHHhcCCeeeeeccCcccceeeeeeccCCCCcceEEEEeEecCce-e---e--ccCceeeEE
Q 022831          153 PLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVT-E---Y--TKGNAYAQV  226 (291)
Q Consensus       153 ~~~hv~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~-~---~--~~~~g~~hi  226 (291)
                      ++.|+.|.|+|++++++||+++|||+.......++......++..+    ...++|....+.. +   +  ..+.|+.|+
T Consensus         1 ~i~hv~l~v~D~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~----~~~i~l~~~~~~~~~~~~~~~~~~~g~~~i   76 (128)
T TIGR03081         1 RIDHVGIAVPDLEEAAKLYEDVLGAHVSHIEEVPEQGVKVVFIALG----NTKVELLEPLGEDSPIAKFLEKNGGGIHHI   76 (128)
T ss_pred             CCCEEEEEeCCHHHHHHHHHHHhCCCCccceeCCCCCcEEEEEecC----CEEEEEEecCCCCChHHHHHhcCCCceEEE
Confidence            4789999999999999999999999986543322323445555533    2456665432211 1   0  114578899


Q ss_pred             EEEecChHHHHHHHHHHHHhhCCeeeec-ccccCCCCceEEEE--ECCCCCeEEEEe
Q 022831          227 AISTDDVYKSAEVVNLVTQELGGKITRQ-PGPIPGLNTKITSF--VDPDGWKTVLVD  280 (291)
Q Consensus       227 a~~v~di~~~~~~l~~~~~~~G~~~~~~-p~~~~~~~~~~~~~--~DPdG~~iel~~  280 (291)
                      +|.|+|++++++++    +++|+++..+ |...++ +.+..|+  +||||+.||++|
T Consensus        77 ~~~v~di~~~~~~l----~~~G~~~~~~~~~~~~~-g~~~~~~~~~dp~G~~~E~~~  128 (128)
T TIGR03081        77 AIEVDDIEAALETL----KEKGVRLIDEEPRIGAG-GKPVAFLHPKSTGGVLIELEE  128 (128)
T ss_pred             EEEcCCHHHHHHHH----HHCCCcccCCCCccCCC-CCEEEEecccccCcEEEEecC
Confidence            99999999999999    9999998875 443333 4456666  799999999985

Members of this protein family are the enzyme methylmalonyl-CoA epimerase (EC 5.1.99.1), also called methylmalonyl-CoA racemase. This enzyme converts (2R)-methylmalonyl-CoA to (2S)-methylmalonyl-CoA, which is then a substrate for methylmalonyl-CoA mutase (TIGR00642). It is known in bacteria, archaea, and as a mitochondrial protein in animals. It is closely related to lactoylglutathione lyase (TIGR00068), which is also called glyoxylase I, and is also a homodimer.

>cd08352 Glo_EDI_BRP_like_1 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.71  E-value=1.7e-16  Score=117.77  Aligned_cols=120  Identities=23%  Similarity=0.278  Sum_probs=84.2

Q ss_pred             CCceeeeeeeCCchhhHHHHHHhcCCeeeeeccCcc-cceeeeeeccCCCCcceEEEEeEecCc--e-eeccCceeeEEE
Q 022831          152 EPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPE-LKCALAMLGYAEEDQTTVLELAYSYGV--T-EYTKGNAYAQVA  227 (291)
Q Consensus       152 ~~~~hv~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~l~~~~~~--~-~~~~~~g~~hia  227 (291)
                      .+++|+.|.|+|++++.+||+++|||+.......++ ..+.+ .+..++   ...+++......  . ..+.+.|++|++
T Consensus         2 ~~~~hi~l~v~d~~~a~~fy~~~lG~~~~~~~~~~~~~~~~~-~~~~~~---~~~i~l~~~~~~~~~~~~~~~~g~~h~~   77 (125)
T cd08352           2 FGIHHVAIICSDYEKSKEFYVEILGFKVIREVYRPERGSYKL-DLLLNG---GYQLELFSFPNPPERPSYPEACGLRHLA   77 (125)
T ss_pred             CccceEEEEcCCHHHHHHHHHHhcCCEEeeeeecCCCCcEEE-EEecCC---CcEEEEEEcCCCCCCCCCCcCCCceEEE
Confidence            368999999999999999999999999875432222 12222 222111   234454332211  1 112345889999


Q ss_pred             EEecChHHHHHHHHHHHHhhCCeeeecccccCCCCceEEEEECCCCCeEEEEe
Q 022831          228 ISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVD  280 (291)
Q Consensus       228 ~~v~di~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iel~~  280 (291)
                      |.|+|++++++++    ++.|+++...|.... .+.+++|++||+|+.|||+|
T Consensus        78 ~~v~d~~~~~~~l----~~~G~~~~~~~~~~~-~~~~~~~~~DP~G~~iEl~~  125 (125)
T cd08352          78 FSVEDIEAAVKHL----KAKGVEVEPIRVDEF-TGKRFTFFYDPDGLPLELYE  125 (125)
T ss_pred             EEeCCHHHHHHHH----HHcCCccccccccCC-CceEEEEEECCCCCEEEecC
Confidence            9999999999999    999999877654333 34578999999999999986

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>cd07237 BphC1-RGP6_C_like C-terminal domain of 2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC, EC 1

Probab=99.71  E-value=2e-16  Score=122.05  Aligned_cols=124  Identities=18%  Similarity=0.181  Sum_probs=90.2

Q ss_pred             CCCCceeeeeeeCCchhhHHHHHHhcCCeeeeeccCc---ccceeeeeeccCCCCcceEEEEeEecCceeeccCceeeEE
Q 022831          150 TPEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSP---ELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQV  226 (291)
Q Consensus       150 ~~~~~~hv~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~~hi  226 (291)
                      .+.+|.|+.|.|+|++++++||+++|||++.......   ++...+.++..++.  +..+.+...      ..+.+++|+
T Consensus         6 ~~~~l~Hi~l~v~Dl~~a~~FY~~~LGl~~~~~~~~~~~~~~~~~~~~l~~~~~--~~~i~~~~~------~~~~g~~Hi   77 (154)
T cd07237           6 GDQGLGHVVLATPDPDEAHAFYRDVLGFRLSDEIDIPLPPGPTARVTFLHCNGR--HHSLALAEG------PGPKRIHHL   77 (154)
T ss_pred             CCCccCEEEEEeCCHHHHHHHHHHccCCEEEEEEcccCCCCCcceEEEEEeCCC--CCCEEEEcC------CCCceeEEE
Confidence            3567999999999999999999999999976542221   11234455543322  233444321      124689999


Q ss_pred             EEEecChHH---HHHHHHHHHHhhCCeeeecccccCCCCceEEEEECCCCCeEEEEechhhh
Q 022831          227 AISTDDVYK---SAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNEDFL  285 (291)
Q Consensus       227 a~~v~di~~---~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~~~~  285 (291)
                      +|.|+|+++   ++++|    +++|+++..+|.+++..+.+.+|++||+|+.|||+......
T Consensus        78 af~V~d~~~l~~~~~~L----~~~G~~v~~~~~~~~~~~~~~~y~~DPdG~~iEl~~~~~~~  135 (154)
T cd07237          78 MLEVTSLDDVGRAYDRV----RARGIPIAMTLGRHTNDRMLSFYVRTPSGFAIEYGWGGRTV  135 (154)
T ss_pred             EEEcCCHHHHHHHHHHH----HHcCCceeccCCccCCCCcEEEEEECCCCcEEEeccCceEc
Confidence            999987654   67777    99999998888877765678899999999999998765443

13.11.39) 1 from Rhodococcus globerulus P6 (BphC1-RGP6) and similar proteins. This subfamily contains the C-terminal, catalytic, domain of BphC1-RGP6 and similar proteins. BphC catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). This subfamily of BphCs belongs to the type I extradiol dioxygenase family, which require a metal in the active site in its catalytic mechanism. Polychlorinated biphenyl degrading bacteria demonstrate a multiplicity of BphCs. For example, three types of BphC enzymes have been found in Rhodococcus globerulus (BphC1-RGP6 - BphC3-RGP6), all three enzymes are type I extradiol dioxygenases. BphC1-RGP6 has an internal duplication, it is a two-domain dioxygenase which forms octamers, and has Fe(II) at the catalytic site. Its C-terminal repeat is represented in thi

>cd09014 BphC-JF8_C_like C-terminal, catalytic, domain of BphC_JF8, (2,3-dihydroxybiphenyl 1,2-dioxygenase) from Bacillus sp

Probab=99.71  E-value=6.7e-16  Score=120.56  Aligned_cols=124  Identities=23%  Similarity=0.309  Sum_probs=87.2

Q ss_pred             CCccceeeEEEEeCCHHHHHHHHHHhcCCEEEEEeccCCCceeeEEeeccCCCcceEEEeeecCCCCcccCCCCceEEEE
Q 022831           19 KDKRRLLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHLAI   98 (291)
Q Consensus        19 ~~~~~i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~g~~~~~i~~   98 (291)
                      |.|.+|+|+.|.|+|++++++||+++|||++........+.....|+.....  ...+.+.....    ....++.|+||
T Consensus         2 ~~i~~i~Hi~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~~~~--~~~i~l~~~~~----~~~~~~~hiaf   75 (166)
T cd09014           2 VGVRRLDHVNLLASDVDANRDFMEEVLGFRLREQIRLDNGKEAGAWMSVSNK--VHDVAYTRDPA----GARGRLHHLAY   75 (166)
T ss_pred             CCcceeeeEEEEcCCHHHHHHHHHHccCCEEEEEEecCCCceEEEEEeCCCC--ceeEEEecCCC----CCCCCceEEEE
Confidence            6789999999999999999999999999998765433322223455554322  22233322111    11236789999


Q ss_pred             EECC---HHHHHHHHHHcCCeeeeCCccCCCCceEEEEEECCCCcEEEEEecC
Q 022831           99 ATED---VYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFELIQRG  148 (291)
Q Consensus        99 ~v~d---~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dP~G~~iel~~~~  148 (291)
                      .|+|   +++++++|.++|+++...|.....+...++|++||+|+.|||+...
T Consensus        76 ~v~~~~~l~~~~~~l~~~Gv~i~~~p~~~~~~~~~~~y~~DPdG~~iEl~~~~  128 (166)
T cd09014          76 ALDTREDVLRAADIFLENGIFIEAGPGKHGIQQTFFLYVYEPGGNRVELFGGG  128 (166)
T ss_pred             ECCCHHHHHHHHHHHHHcCCccccCCcccCCCCceEEEEECCCCCEEEEEEcC
Confidence            9986   5578899999999986565554433333588999999999999873

JF8 and similar proteins. 2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC) catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, a key step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). BphC belongs to the type I extradiol dioxygenase family, which requires a metal ion in the active site in its catalytic mechanism. Polychlorinated biphenyl degrading bacteria demonstrate a multiplicity of BphCs. This subfamily of BphC is represented by the enzyme purified from the thermophilic biphenyl and naphthalene degrader, Bacillus sp. JF8. The members in this family of BphC enzymes may use either Mn(II) or Fe(II) as cofactors. The enzyme purified from Bacillus sp. JF8 is Mn(II)-dependent, however, the enzyme from Rhodococcus jostii RHAI has Fe(II) bound to it. BphC_JF8 is thermostable and its optimum activity is at 85 degrees C. Th

>cd07247 SgaA_N_like N-terminal domain of Streptomyces griseus SgaA (suppression of growth disturbance caused by A-factor at a high concentration under high osmolality during early growth phase), and similar domains

Probab=99.70  E-value=4.2e-16  Score=113.97  Aligned_cols=114  Identities=25%  Similarity=0.238  Sum_probs=83.5

Q ss_pred             ceeeeeeeCCchhhHHHHHHhcCCeeeeeccCcccceeeeeeccCCCCcceEEEEeEecCceeeccCceeeEEEEEecCh
Q 022831          154 LCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAISTDDV  233 (291)
Q Consensus       154 ~~hv~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~~hia~~v~di  233 (291)
                      +.|++|.|+|++++++||+++||++...... ....+  .++..++   ...+.+.......  ...++..|++|.|+|+
T Consensus         1 ~~hi~l~v~d~~~s~~FY~~~lG~~~~~~~~-~~~~~--~~~~~~~---~~~~~~~~~~~~~--~~~~~~~~~~f~v~di   72 (114)
T cd07247           1 PVWFELPTTDPERAKAFYGAVFGWTFEDMGD-GGGDY--AVFSTGG---GAVGGLMKAPEPA--AGSPPGWLVYFAVDDV   72 (114)
T ss_pred             CEEEEeeCCCHHHHHHHHHhccCceeeeccC-CCCce--EEEEeCC---ccEEEEecCCCCC--CCCCCeEEEEEEeCCH
Confidence            4799999999999999999999999865542 12223  3333222   1223333222111  1234668999999999


Q ss_pred             HHHHHHHHHHHHhhCCeeeecccccCCCCceEEEEECCCCCeEEEEe
Q 022831          234 YKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVD  280 (291)
Q Consensus       234 ~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iel~~  280 (291)
                      +++++++    +++|+++..+|...++ +++.++++|||||.|+|+|
T Consensus        73 ~~~~~~l----~~~g~~~~~~~~~~~~-~~~~~~~~DPdG~~~~l~~  114 (114)
T cd07247          73 DAAAARV----EAAGGKVLVPPTDIPG-VGRFAVFADPEGAVFGLWQ  114 (114)
T ss_pred             HHHHHHH----HHCCCEEEeCCcccCC-cEEEEEEECCCCCEEEeEC
Confidence            9999999    9999999999887764 4688999999999999985

SgaA suppresses the growth disturbances caused by high osmolarity and a high concentration of A-factor, a microbial hormone, during the early growth phase in Streptomyces griseus. A-factor (2-isocapryloyl-3R-hydroxymethyl-gamma-butyrolactone) controls morphological differentiation and secondary metabolism in Streptomyces griseus. It is a chemical signaling molecule that at a very low concentration acts as a switch for yellow pigment production, aerial mycelium formation, streptomycin production, and streptomycin resistance. The structure and amino acid sequence of SgaA are closely related to a group of antibiotics resistance proteins, including bleomycin resistance protein, mitomycin resistance protein, and fosfomycin resistance proteins. SgaA might also function as a strep

>PF00903 Glyoxalase: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily This Prosite is specific to glyoxalases This Prosite is specific to Extradiol ring-cleavage dioxygenases This prints entry is specific to bleomycin resistance protein

Probab=99.70  E-value=1e-16  Score=119.38  Aligned_cols=120  Identities=26%  Similarity=0.393  Sum_probs=83.7

Q ss_pred             ceeeEEEEeCCHHHHHHHHHHhcCCEEEEEecc--CCCceeeEEeeccCCCcceEEEeeecCCCCcccC---CCCceEEE
Q 022831           23 RLLHAVYRVGDLDRTIKYYTECFGMELLRKRDV--PEEKYSNAFLGFGPEQSYFVVELTYNYGVTSYDI---GTGFGHLA   97 (291)
Q Consensus        23 ~i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~---g~~~~~i~   97 (291)
                      ||+||+|.|+|++++.+||+++|||++......  ........++..+  ...+.+.............   +.+..|++
T Consensus         1 ~l~Hi~i~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~   78 (128)
T PF00903_consen    1 GLDHIAIRVKDLEKAIDFYTDVLGFRLVEESDNDGEGGDLRIAFLRIG--EGHIELFLNPSPPPRASGHSFPEHGGHHIA   78 (128)
T ss_dssp             EEEEEEEEESCHHHHHHHHHHTTTSEEEEEEEEESTTEEEEEEEEEST--SSCEEEEEEESSSSSSEEEHHHSHTSEEEE
T ss_pred             CeEEEEEEcCCHHHHHHHHHHHhCCcEEeeeccccccccccceeeccc--ccceeeeeeccccccccccccccccceeEE
Confidence            689999999999999999999999999987662  2223334444433  3333343333222211111   01345566


Q ss_pred             EEE---CCHHHHHHHHHHcCCeeeeCCccCCCCceEEEEEECCCCcEEEE
Q 022831           98 IAT---EDVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFEL  144 (291)
Q Consensus        98 ~~v---~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dP~G~~iel  144 (291)
                      +.+   +|+++++++|+++|+++..++.....+...+.|++||+|+.|||
T Consensus        79 ~~~~~~~dl~~~~~~l~~~g~~~~~~~~~~~~~~~~~~y~~Dp~G~~iE~  128 (128)
T PF00903_consen   79 FLAFDVDDLDAAYERLKAQGVEIVEEPDRYYFGSGYSFYFRDPDGNLIEF  128 (128)
T ss_dssp             EEESSHHHHHHHHHHHHHTTGEEEEEEEEHSTTCEEEEEEEETTSEEEEE
T ss_pred             EEeccHHHHHHHHHHHhhcCccEEecCCCCCCCCEEEEEEECCCCCEEEC
Confidence            655   56888999999999999988877777767666799999999996

; InterPro: IPR004360 Glyoxalase I (4.4.1.5 from EC) (lactoylglutathione lyase) catalyzes the first step of the glyoxal pathway. S-lactoylglutathione is then converted by glyoxalase II to lactic acid []. Glyoxalase I is an ubiquitous enzyme which binds one mole of zinc per subunit. The bacterial and yeast enzymes are monomeric while the mammalian one is homodimeric. The sequence of glyoxalase I is well conserved. The domain represented by this entry is found in glyoxalase I and in other related proteins, including fosfomycin resistance proteins FosB [], FosA [], FosX [] and dioxygenases (eg. 4-hydroxyphenylpyruvate dioxygenase).; PDB: 1CJX_A 1NPB_E 3OJT_C 3OJN_A 2IG9_B 3OJJ_B 3OJK_D 1Q0C_D 1F1X_C 3BZA_B ....

>cd07237 BphC1-RGP6_C_like C-terminal domain of 2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC, EC 1

Probab=99.70  E-value=8.3e-16  Score=118.59  Aligned_cols=122  Identities=20%  Similarity=0.287  Sum_probs=87.5

Q ss_pred             CCccceeeEEEEeCCHHHHHHHHHHhcCCEEEEEeccC---CCceeeEEeeccCCCcceEEEeeecCCCCcccCCCCceE
Q 022831           19 KDKRRLLHAVYRVGDLDRTIKYYTECFGMELLRKRDVP---EEKYSNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGH   95 (291)
Q Consensus        19 ~~~~~i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~g~~~~~   95 (291)
                      ..-++|+||.|.|+|++++++||+++|||++.......   .......++..+..  ...+.+....      .+.++.|
T Consensus         5 ~~~~~l~Hi~l~v~Dl~~a~~FY~~~LGl~~~~~~~~~~~~~~~~~~~~l~~~~~--~~~i~~~~~~------~~~g~~H   76 (154)
T cd07237           5 TGDQGLGHVVLATPDPDEAHAFYRDVLGFRLSDEIDIPLPPGPTARVTFLHCNGR--HHSLALAEGP------GPKRIHH   76 (154)
T ss_pred             cCCCccCEEEEEeCCHHHHHHHHHHccCCEEEEEEcccCCCCCcceEEEEEeCCC--CCCEEEEcCC------CCceeEE
Confidence            34578999999999999999999999999986643321   11234555654322  2223332211      1347899


Q ss_pred             EEEEECCHH---HHHHHHHHcCCeeeeCCccCCCCceEEEEEECCCCcEEEEEecC
Q 022831           96 LAIATEDVY---KMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFELIQRG  148 (291)
Q Consensus        96 i~~~v~d~~---~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dP~G~~iel~~~~  148 (291)
                      ++|.|+|++   +++++|+++|+++...+...+.+....+|++||+|+.|||....
T Consensus        77 iaf~V~d~~~l~~~~~~L~~~G~~v~~~~~~~~~~~~~~~y~~DPdG~~iEl~~~~  132 (154)
T cd07237          77 LMLEVTSLDDVGRAYDRVRARGIPIAMTLGRHTNDRMLSFYVRTPSGFAIEYGWGG  132 (154)
T ss_pred             EEEEcCCHHHHHHHHHHHHHcCCceeccCCccCCCCcEEEEEECCCCcEEEeccCc
Confidence            999998755   68999999999988776655544445689999999999998765

13.11.39) 1 from Rhodococcus globerulus P6 (BphC1-RGP6) and similar proteins. This subfamily contains the C-terminal, catalytic, domain of BphC1-RGP6 and similar proteins. BphC catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). This subfamily of BphCs belongs to the type I extradiol dioxygenase family, which require a metal in the active site in its catalytic mechanism. Polychlorinated biphenyl degrading bacteria demonstrate a multiplicity of BphCs. For example, three types of BphC enzymes have been found in Rhodococcus globerulus (BphC1-RGP6 - BphC3-RGP6), all three enzymes are type I extradiol dioxygenases. BphC1-RGP6 has an internal duplication, it is a two-domain dioxygenase which forms octamers, and has Fe(II) at the catalytic site. Its C-terminal repeat is represented in thi

>TIGR03081 metmalonyl_epim methylmalonyl-CoA epimerase

Probab=99.70  E-value=4.2e-16  Score=116.33  Aligned_cols=119  Identities=29%  Similarity=0.490  Sum_probs=84.8

Q ss_pred             ceeeEEEEeCCHHHHHHHHHHhcCCEEEEEeccCCCceeeEEeeccCCCcceEEEeeecCCC-Cc---c--cCCCCceEE
Q 022831           23 RLLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGV-TS---Y--DIGTGFGHL   96 (291)
Q Consensus        23 ~i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~-~~---~--~~g~~~~~i   96 (291)
                      +|+|+.|.|+|++++++||+++|||++......++.+...+++..+  .  ..+++...... ..   +  ..+.+..|+
T Consensus         1 ~i~hv~l~v~D~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~--~--~~i~l~~~~~~~~~~~~~~~~~~~g~~~i   76 (128)
T TIGR03081         1 RIDHVGIAVPDLEEAAKLYEDVLGAHVSHIEEVPEQGVKVVFIALG--N--TKVELLEPLGEDSPIAKFLEKNGGGIHHI   76 (128)
T ss_pred             CCCEEEEEeCCHHHHHHHHHHHhCCCCccceeCCCCCcEEEEEecC--C--EEEEEEecCCCCChHHHHHhcCCCceEEE
Confidence            5899999999999999999999999987543333334445555543  2  23555442111 11   1  124577899


Q ss_pred             EEEECCHHHHHHHHHHcCCeeeeC-CccCCCCceEEEEE--ECCCCcEEEEEe
Q 022831           97 AIATEDVYKMVENIRAKGGNVTRE-PGPLKGMTTHFAFV--KDPDGYIFELIQ  146 (291)
Q Consensus        97 ~~~v~d~~~~~~~l~~~G~~~~~~-~~~~~~g~~~~~~~--~dP~G~~iel~~  146 (291)
                      ||.|+|+++++++|.++|+++..+ |....+|.+ ..|+  +||||+.||+++
T Consensus        77 ~~~v~di~~~~~~l~~~G~~~~~~~~~~~~~g~~-~~~~~~~dp~G~~~E~~~  128 (128)
T TIGR03081        77 AIEVDDIEAALETLKEKGVRLIDEEPRIGAGGKP-VAFLHPKSTGGVLIELEE  128 (128)
T ss_pred             EEEcCCHHHHHHHHHHCCCcccCCCCccCCCCCE-EEEecccccCcEEEEecC
Confidence            999999999999999999998764 455445544 3566  799999999975

Members of this protein family are the enzyme methylmalonyl-CoA epimerase (EC 5.1.99.1), also called methylmalonyl-CoA racemase. This enzyme converts (2R)-methylmalonyl-CoA to (2S)-methylmalonyl-CoA, which is then a substrate for methylmalonyl-CoA mutase (TIGR00642). It is known in bacteria, archaea, and as a mitochondrial protein in animals. It is closely related to lactoylglutathione lyase (TIGR00068), which is also called glyoxylase I, and is also a homodimer.

>cd08364 FosX FosX, a fosfomycin resistance protein, catalyzes the addition of a water molecule to the C1 position of the antibiotic with inversion of configuration at C1

Probab=99.70  E-value=1.3e-15  Score=114.38  Aligned_cols=120  Identities=19%  Similarity=0.225  Sum_probs=82.2

Q ss_pred             CccceeeEEEEeCCHHHHHHHHHHhcCCEEEEEeccCCCce-eeEEeeccCCCcceEEEeeecCCCCcccCCCCceEEEE
Q 022831           20 DKRRLLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKY-SNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHLAI   98 (291)
Q Consensus        20 ~~~~i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~l~~~~~~~~~~~g~~~~~i~~   98 (291)
                      |+.+|+|+.|.|+|++++++||+++|||++..+........ ...++..+  .  ..+.+......    ...+..|++|
T Consensus         1 mi~~i~hv~l~V~dl~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~--~--~~i~l~~~~~~----~~~~~~Hiaf   72 (131)
T cd08364           1 MIEGLSHITLIVKDLNKTTAFLQNIFNAREVYSSGDKTFSLSKEKFFLIG--G--LWIAIMEGDSL----QERTYNHIAF   72 (131)
T ss_pred             CcccEeEEEEEeCCHHHHHHHHHHHhCCeeEEecccccccccceeEEEcC--C--eEEEEecCCCC----CCCCceEEEE
Confidence            57899999999999999999999999998866532211000 01122222  1  23444422111    1236789999


Q ss_pred             EEC--CHHHHHHHHHHcCCeeeeCCccCCCCceEEEEEECCCCcEEEEEecC
Q 022831           99 ATE--DVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFELIQRG  148 (291)
Q Consensus        99 ~v~--d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dP~G~~iel~~~~  148 (291)
                      .|+  |+++++++|.++|+++..+ .+...+....+||+||+|+.|||....
T Consensus        73 ~v~~~~ld~~~~~l~~~gv~~~~~-~~~~~~~g~~~yf~DPdG~~iEl~~~~  123 (131)
T cd08364          73 KISDSDVDEYTERIKALGVEMKPP-RPRVQGEGRSIYFYDFDNHLFELHTGT  123 (131)
T ss_pred             EcCHHHHHHHHHHHHHCCCEEecC-CccccCCceEEEEECCCCCEEEEecCC
Confidence            998  7999999999999987643 233333344689999999999998653

This subfamily family contains FosX, a fosfomycin resistant protein. Fosfomycin inhibits the enzyme UDP-Nacetylglucosamine-3-enolpyruvyltransferase (MurA), which catalyzes the first committed step in bacterial cell wall biosynthesis. FosX catalyzes the addition of a water molecule to the C1 position of the antibiotic with inversion of the configuration at C1 in the presence of Mn(II). The hydrated fosfomycin loses the inhibition activity. FosX is evolutionarily related to glyoxalase I and type I extradiol dioxygenases.

>cd07253 Glo_EDI_BRP_like_2 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.70  E-value=1.1e-15  Score=113.42  Aligned_cols=118  Identities=29%  Similarity=0.478  Sum_probs=84.4

Q ss_pred             ccceeeEEEEeCCHHHHHHHHHHhcCCEEEEEeccCCCceeeEEeeccCCCcceEEEeeecCC---CCcccCCCCceEEE
Q 022831           21 KRRLLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYG---VTSYDIGTGFGHLA   97 (291)
Q Consensus        21 ~~~i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~---~~~~~~g~~~~~i~   97 (291)
                      |++|+|+.|.|+|++++++||+++|||+........  .  ..++..+.    ..+.+.....   ......+.+..|++
T Consensus         1 ~~~l~hi~l~v~d~~~s~~Fy~~~lG~~~~~~~~~~--~--~~~~~~~~----~~~~l~~~~~~~~~~~~~~~~~~~hi~   72 (125)
T cd07253           1 IKRIDHVVLTVADIEATLDFYTRVLGMEVVRFGEEV--G--RKALRFGS----QKINLHPVGGEFEPAAGSPGPGSDDLC   72 (125)
T ss_pred             CcccceEEEEecCHHHHHHHHHHHhCceeecccccC--C--ceEEEeCC----EEEEEecCCCccCcCccCCCCCCceEE
Confidence            578999999999999999999999999987643211  1  33344332    2344443222   12223445789999


Q ss_pred             EEECC-HHHHHHHHHHcCCeeeeCCccCCC--CceEEEEEECCCCcEEEEEe
Q 022831           98 IATED-VYKMVENIRAKGGNVTREPGPLKG--MTTHFAFVKDPDGYIFELIQ  146 (291)
Q Consensus        98 ~~v~d-~~~~~~~l~~~G~~~~~~~~~~~~--g~~~~~~~~dP~G~~iel~~  146 (291)
                      |.+++ +++++++|.++|+++...+....+  +....++++||+|+.||+.+
T Consensus        73 ~~~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~DPdG~~ve~~~  124 (125)
T cd07253          73 LITEPPIDELVAHLEAHGVPIEEGPVPRTGARGPITSVYFRDPDGNLIELSN  124 (125)
T ss_pred             EEecccHHHHHHHHHHCCceeecCcccccCCCCCccEEEEECCCCCEEEeee
Confidence            99975 999999999999998766654322  22345889999999999975

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>cd09013 BphC-JF8_N_like N-terminal, non-catalytic, domain of BphC_JF8, (2,3-dihydroxybiphenyl 1,2-dioxygenase) from Bacillus sp

Probab=99.69  E-value=1.3e-15  Score=112.76  Aligned_cols=115  Identities=19%  Similarity=0.237  Sum_probs=82.4

Q ss_pred             CCccceeeEEEEeCCHHHHHHHHHHhcCCEEEEEeccCCCceeeEEeeccCCCcceEEEeeecCCCCcccCCCCceEEEE
Q 022831           19 KDKRRLLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHLAI   98 (291)
Q Consensus        19 ~~~~~i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~g~~~~~i~~   98 (291)
                      |.+.+|+|+.|.|+|++++.+||+++|||++..+..      ...++..........+.+...       ...++.|++|
T Consensus         2 ~~i~~i~hv~l~v~dl~~a~~FY~~~lG~~~~~~~~------~~~~l~~~~~~~~~~~~l~~~-------~~~~~~h~af   68 (121)
T cd09013           2 FDIAHLAHVELLTPKPEESLWFFTDVLGLEETGREG------QSVYLRAWGDYEHHSLKLTES-------PEAGLGHIAW   68 (121)
T ss_pred             CCccEeeEEEEEeCCHHHHHHHHHhCcCCEEEeecC------CeEEEEeccCCCccEEEEeeC-------CCCceEEEEE
Confidence            678999999999999999999999999999876532      134554322212333444322       1247889999


Q ss_pred             EEC---CHHHHHHHHHHcCCeeeeCCccCCCCceEEEEEECCCCcEEEEEecC
Q 022831           99 ATE---DVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFELIQRG  148 (291)
Q Consensus        99 ~v~---d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dP~G~~iel~~~~  148 (291)
                      .|+   |++++++++.++|+++...+.....+  ..+|++||+|+.+|+....
T Consensus        69 ~v~~~~~v~~~~~~l~~~G~~~~~~~~~~~~~--~~~~~~DPdG~~iEl~~~~  119 (121)
T cd09013          69 RASSPEALERRVAALEASGLGIGWIEGDPGHG--KAYRFRSPDGHPMELYWEV  119 (121)
T ss_pred             EcCCHHHHHHHHHHHHHcCCccccccCCCCCc--ceEEEECCCCCEEEEEEec
Confidence            997   58899999999999864322222222  3478999999999998643

JF8 and similar proteins. 2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC) catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, a key step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). BphC belongs to the type I extradiol dioxygenase family, which requires a metal ion in the active site in its catalytic mechanism. Polychlorinated biphenyl degrading bacteria demonstrate a multiplicity of BphCs. This subfamily of BphC is represented by the enzyme purified from the thermophilic biphenyl and naphthalene degrader, Bacillus sp. JF8. The members in this family of BphC enzymes may use either Mn(II) or Fe(II) as cofactors. The enzyme purified from Bacillus sp. JF8 is Mn(II)-dependent, however, the enzyme from Rhodococcus jostii RHAI has Fe(II) bound to it. BphC_JF8 is thermostable and its optimum activity is at 85 degrees C

>cd08361 PpCmtC_N N-terminal domain of 2,3-dihydroxy-p-cumate-3,4-dioxygenase (PpCmtC)

Probab=99.69  E-value=7.1e-16  Score=114.62  Aligned_cols=113  Identities=13%  Similarity=0.196  Sum_probs=82.3

Q ss_pred             CccceeeEEEEeCCHHHHHHHHHHhcCCEEEEEeccCCCceeeEEeeccCCCcceEEEeeecCCCCcccCCCCceEEEEE
Q 022831           20 DKRRLLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHLAIA   99 (291)
Q Consensus        20 ~~~~i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~g~~~~~i~~~   99 (291)
                      ++.+|.||+|.|+|++++.+||+++|||++..+..      ...|+..+..  ...+.+....        ++..|++|+
T Consensus         3 ~~~~l~~v~l~v~d~~~s~~FY~~vLG~~~~~~~~------~~~~l~~~~~--~~~i~l~~~~--------~~~~~iaf~   66 (124)
T cd08361           3 ELQDIAYVRLGTRDLAGATRFATDILGLQVAERTA------KATYFRSDAR--DHTLVYIEGD--------PAEQASGFE   66 (124)
T ss_pred             eEEEeeEEEEeeCCHHHHHHHHHhccCceeccCCC------CeEEEEcCCc--cEEEEEEeCC--------CceEEEEEE
Confidence            57899999999999999999999999999865321      1456655332  2234343211        256789999


Q ss_pred             ECC---HHHHHHHHHHcCCeeeeCCccCC--CCceEEEEEECCCCcEEEEEecC
Q 022831          100 TED---VYKMVENIRAKGGNVTREPGPLK--GMTTHFAFVKDPDGYIFELIQRG  148 (291)
Q Consensus       100 v~d---~~~~~~~l~~~G~~~~~~~~~~~--~g~~~~~~~~dP~G~~iel~~~~  148 (291)
                      |+|   +++++++|.++|+++...+....  .+...+++|+|||||.||++...
T Consensus        67 v~~~~dv~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~f~DPdG~~iE~~~~~  120 (124)
T cd08361          67 LRDDDALESAATELEQYGHEVRRGTAEECELRKVKAFIAFRDPSGNSIELVVRP  120 (124)
T ss_pred             ECCHHHHHHHHHHHHHcCCceEEcCHHHhhcCCcceEEEEECcCCCEEEEEEee
Confidence            975   99999999999998765443211  22234578999999999998654

This subfamily contains the N-terminal, non-catalytic, domain of PpCmtC. 2,3-dihydroxy-p-cumate-3,4-dioxygenase (CmtC of Pseudomonas putida F1) is a dioxygenase involved in the eight-step catabolism pathway of p-cymene. CmtC acts upon the reaction intermediate 2,3-dihydroxy-p-cumate, yielding 2-hydroxy-3-carboxy-6-oxo-7-methylocta-2,4-dienoate. The CmtC belongs to the type I family of extradiol dioxygenases. Fe2+ was suggested as a cofactor, same as other enzymes in the family. The type I family of extradiol dioxygenases contains two structurally homologous barrel-shaped domains at the N- and C-terminal. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism.

>cd09011 Glo_EDI_BRP_like_23 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.69  E-value=1e-15  Score=113.03  Aligned_cols=114  Identities=15%  Similarity=0.198  Sum_probs=80.4

Q ss_pred             cceeeEEEEeCCHHHHHHHHHHhcCCEEEEEeccCCCceeeEEeeccCCCcceEEEeee----cCCCCcccCCCCceEEE
Q 022831           22 RRLLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTY----NYGVTSYDIGTGFGHLA   97 (291)
Q Consensus        22 ~~i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~----~~~~~~~~~g~~~~~i~   97 (291)
                      +++.|+.|.|+|++++.+||+++|||++.....  .    ...+.  . .  +.+.+..    .........+.+..|++
T Consensus         1 ~~~~~~~l~v~D~~~a~~FY~~~lG~~~~~~~~--~----~~~~~--~-~--~~l~~~~~~~~~~~~~~~~~~~~~~~l~   69 (120)
T cd09011           1 MKFKNPLLVVKDIEKSKKFYEKVLGLKVVMDFG--E----NVTFE--G-G--FALQEGYSWLEGISKADIIEKSNNFELY   69 (120)
T ss_pred             CEEEEEEEEECCHHHHHHHHHHhcCCEEeeccC--c----eEEEe--c-c--ceeccchhhhccCCcccccccCCceEEE
Confidence            478999999999999999999999999864321  1    11111  0 1  1111100    00011112233557999


Q ss_pred             EEECCHHHHHHHHHHcCC-eeeeCCccCCCCceEEEEEECCCCcEEEEEec
Q 022831           98 IATEDVYKMVENIRAKGG-NVTREPGPLKGMTTHFAFVKDPDGYIFELIQR  147 (291)
Q Consensus        98 ~~v~d~~~~~~~l~~~G~-~~~~~~~~~~~g~~~~~~~~dP~G~~iel~~~  147 (291)
                      |.|+|+++++++|+++|+ ++..+|...++|.+. ++++|||||.|+|.+.
T Consensus        70 ~~v~dvd~~~~~l~~~g~~~~~~~~~~~~~g~r~-~~~~DPdGn~iei~~~  119 (120)
T cd09011          70 FEEEDFDAFLDKLKRYDNIEYVHPIKEHPWGQRV-VRFYDPDKHIIEVGES  119 (120)
T ss_pred             EEehhhHHHHHHHHhcCCcEEecCcccCCCccEE-EEEECCCCCEEEEecc
Confidence            999999999999999986 677788888887664 8999999999999874

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd08347 PcpA_C_like C-terminal domain of Sphingobium chlorophenolicum 2,6-dichloro-p-hydroquinone 1,2-dioxygenase (PcpA), and similar proteins

Probab=99.69  E-value=1.8e-15  Score=116.82  Aligned_cols=117  Identities=18%  Similarity=0.194  Sum_probs=83.0

Q ss_pred             ceeeEEEEeCCHHHHHHHHHHhcCCEEEEEeccCCCceeeEEeeccCCCcceEEEeeecCCCCc-ccCCCCceEEEEEEC
Q 022831           23 RLLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTS-YDIGTGFGHLAIATE  101 (291)
Q Consensus        23 ~i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~-~~~g~~~~~i~~~v~  101 (291)
                      +|+||+|.|+|++++++||+++|||++..+..   +  ...+...+. ..+..+.+........ .....++.|++|.|+
T Consensus         1 gl~HI~i~V~Dle~s~~FY~~~LG~~~~~~~~---~--~~~~~~~~~-~~~~~l~l~~~~~~~~~~~~~~~l~Hiaf~v~   74 (157)
T cd08347           1 GLHGVTLTVRDPEATAAFLTDVLGFREVGEEG---D--RVRLEEGGG-GPGAVVDVLEEPDQPRGRPGAGTVHHVAFRVP   74 (157)
T ss_pred             CcccEEEEeCCHHHHHHHHHHhcCCEEEeeeC---C--EEEEEecCC-CCCCEEEEEeCCCCCCCcccCCceEEEEEECC
Confidence            58999999999999999999999999976543   1  123333221 2345566655422211 222346889999999


Q ss_pred             C---HHHHHHHHHHcCCeeeeCCccCCCCceEEEEEECCCCcEEEEEecC
Q 022831          102 D---VYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFELIQRG  148 (291)
Q Consensus       102 d---~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dP~G~~iel~~~~  148 (291)
                      |   +++++++|.+.|+.+.. +...  +....+||+||+|+.||++...
T Consensus        75 d~~dvd~~~~~L~~~Gv~~~~-~~~~--~~~~s~yf~DPdG~~iEl~~~~  121 (157)
T cd08347          75 DDEELEAWKERLEALGLPVSG-IVDR--FYFKSLYFREPGGILFEIATDG  121 (157)
T ss_pred             CHHHHHHHHHHHHHCCCCccc-cccc--ccEEEEEEECCCCcEEEEEECC
Confidence            8   89999999999998543 2222  2234589999999999999875

The C-terminal domain of Sphingobium chlorophenolicum (formerly Sphingomonas chlorophenolica) 2,6-dichloro-p-hydroquinone 1,2-dioxygenase (PcpA), and similar proteins. PcpA is a key enzyme in the pentachlorophenol (PCP) degradation pathway, catalyzing the conversion of 2,6-dichloro-p-hydroquinone to 2-chloromaleylacetate. This domain belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases.

>cd07247 SgaA_N_like N-terminal domain of Streptomyces griseus SgaA (suppression of growth disturbance caused by A-factor at a high concentration under high osmolality during early growth phase), and similar domains

Probab=99.69  E-value=1.8e-15  Score=110.61  Aligned_cols=114  Identities=24%  Similarity=0.263  Sum_probs=82.1

Q ss_pred             eeeEEEEeCCHHHHHHHHHHhcCCEEEEEeccCCCceeeEEeeccCCCcceEEEeeecCCCCcccCCCCceEEEEEECCH
Q 022831           24 LLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHLAIATEDV  103 (291)
Q Consensus        24 i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~g~~~~~i~~~v~d~  103 (291)
                      +.|++|.|+|++++++||+++||+++..... ...  ...++..++   ...+.+.......  ..+....+++|.|+|+
T Consensus         1 ~~hi~l~v~d~~~s~~FY~~~lG~~~~~~~~-~~~--~~~~~~~~~---~~~~~~~~~~~~~--~~~~~~~~~~f~v~di   72 (114)
T cd07247           1 PVWFELPTTDPERAKAFYGAVFGWTFEDMGD-GGG--DYAVFSTGG---GAVGGLMKAPEPA--AGSPPGWLVYFAVDDV   72 (114)
T ss_pred             CEEEEeeCCCHHHHHHHHHhccCceeeeccC-CCC--ceEEEEeCC---ccEEEEecCCCCC--CCCCCeEEEEEEeCCH
Confidence            5799999999999999999999999875432 112  234444332   1122222221111  1233567899999999


Q ss_pred             HHHHHHHHHcCCeeeeCCccCCCCceEEEEEECCCCcEEEEEe
Q 022831          104 YKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFELIQ  146 (291)
Q Consensus       104 ~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dP~G~~iel~~  146 (291)
                      ++++++|.++|+++..+|...+++. ..++++||+|+.|+|++
T Consensus        73 ~~~~~~l~~~g~~~~~~~~~~~~~~-~~~~~~DPdG~~~~l~~  114 (114)
T cd07247          73 DAAAARVEAAGGKVLVPPTDIPGVG-RFAVFADPEGAVFGLWQ  114 (114)
T ss_pred             HHHHHHHHHCCCEEEeCCcccCCcE-EEEEEECCCCCEEEeEC
Confidence            9999999999999888877766444 45889999999999975

SgaA suppresses the growth disturbances caused by high osmolarity and a high concentration of A-factor, a microbial hormone, during the early growth phase in Streptomyces griseus. A-factor (2-isocapryloyl-3R-hydroxymethyl-gamma-butyrolactone) controls morphological differentiation and secondary metabolism in Streptomyces griseus. It is a chemical signaling molecule that at a very low concentration acts as a switch for yellow pigment production, aerial mycelium formation, streptomycin production, and streptomycin resistance. The structure and amino acid sequence of SgaA are closely related to a group of antibiotics resistance proteins, including bleomycin resistance protein, mitomycin resistance protein, and fosfomycin resistance proteins. SgaA might also function as a strep

>cd08363 FosB FosB, a fosfomycin resistance protein, catalyzes the Mg(II) dependent addition of L-cysteine to the epoxide ring of fosfomycin

Probab=99.69  E-value=9.5e-16  Score=115.02  Aligned_cols=114  Identities=21%  Similarity=0.348  Sum_probs=80.9

Q ss_pred             eeeEEEEeCCHHHHHHHHHHhcCCEEEEEeccCCCceeeEEeeccCCCcceEEEeeecCCCCcccCCCCceEEEEEECC-
Q 022831           24 LLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHLAIATED-  102 (291)
Q Consensus        24 i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~g~~~~~i~~~v~d-  102 (291)
                      |+||.|.|+|++++++||+++|||++......      ..++..+  +  ..+.+......+......+..|++|.|++ 
T Consensus         1 i~HV~l~V~Dl~~a~~FY~~~LG~~~~~~~~~------~~~~~~~--~--~~l~l~~~~~~~~~~~~~~~~hiaf~v~~~   70 (131)
T cd08363           1 INHMTFSVSNLDKSISFYKHVFMEKLLVLGEK------TAYFTIG--G--TWLALNEEPDIPRNEIRQSYTHIAFTIEDS   70 (131)
T ss_pred             CceEEEEECCHHHHHHHHHHhhCCEEeccCCc------cceEeeC--c--eEEEEEccCCCCcCCcCccceEEEEEecHH
Confidence            68999999999999999999999998653211      2344443  2  23444332221111223467899999974 


Q ss_pred             -HHHHHHHHHHcCCeeeeCCccCCCCceEEEEEECCCCcEEEEEecC
Q 022831          103 -VYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFELIQRG  148 (291)
Q Consensus       103 -~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dP~G~~iel~~~~  148 (291)
                       +++++++|.++|+++..++....++.+ .+||+||+|+.||+.+..
T Consensus        71 dld~~~~~l~~~G~~~~~~~~~~~~~~~-~~~f~DPdG~~iEl~~~~  116 (131)
T cd08363          71 EFDAFYTRLKEAGVNILPGRKRDVRDRK-SIYFTDPDGHKLEVHTGT  116 (131)
T ss_pred             HHHHHHHHHHHcCCcccCCCccccCcce-EEEEECCCCCEEEEecCc
Confidence             999999999999997655444434434 489999999999998765

This subfamily family contains FosB, a fosfomycin resistant protein. Fosfomycin inhibits the enzyme UDP-Nacetylglucosamine-3-enolpyruvyltransferase (MurA), which catalyzes the first committed step in bacterial cell wall biosynthesis. FosB catalyzes the Mg(II) dependent addition of L-cysteine to the epoxide ring of fosfomycin, (1R,2S)-epoxypropylphosphonic acid, rendering it inactive. FosB is evolutionarily related to glyoxalase I and type I extradiol dioxygenases

>PRK04101 fosfomycin resistance protein FosB; Provisional

Probab=99.68  E-value=9.1e-16  Score=116.38  Aligned_cols=116  Identities=24%  Similarity=0.297  Sum_probs=84.6

Q ss_pred             CCceeeeeeeCCchhhHHHHHHhcCCeeeeeccCcccceeeeeeccCCCCcceEEEEeEecCceeeccCceeeEEEEEec
Q 022831          152 EPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAISTD  231 (291)
Q Consensus       152 ~~~~hv~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~~hia~~v~  231 (291)
                      .++.|+.|.|+|++++.+||+++||+++..+..      ...++..+    ...+.+...........+.++.|++|.++
T Consensus         3 ~~i~hi~L~v~Dl~~s~~FY~~~lG~~~~~~~~------~~~~~~~~----g~~l~l~~~~~~~~~~~~~~~~hiaf~v~   72 (139)
T PRK04101          3 KGINHICFSVSNLEKSIEFYEKVLGAKLLVKGR------KTAYFDLN----GLWIALNEEKDIPRNEIHQSYTHIAFSIE   72 (139)
T ss_pred             CcEEEEEEEecCHHHHHHHHHhccCCEEEeecC------eeEEEecC----CeEEEeeccCCCCCccCCCCeeEEEEEec
Confidence            358999999999999999999999999865421      12233322    23444433221111112346789999998


Q ss_pred             --ChHHHHHHHHHHHHhhCCeeeecccccCCCCceEEEEECCCCCeEEEEech
Q 022831          232 --DVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNE  282 (291)
Q Consensus       232 --di~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~  282 (291)
                        |++++++++    +++|+++..+|...+. +.+.+||+|||||+|||.+..
T Consensus        73 ~~dv~~~~~~l----~~~G~~i~~~~~~~~~-~~~~~~~~DPdGn~iEl~~~~  120 (139)
T PRK04101         73 EEDFDHWYQRL----KENDVNILPGRERDER-DKKSIYFTDPDGHKFEFHTGT  120 (139)
T ss_pred             HHHHHHHHHHH----HHCCceEcCCccccCC-CceEEEEECCCCCEEEEEeCC
Confidence              899999999    9999998877766654 468899999999999998743

>cd08343 ED_TypeI_classII_C C-terminal domain of type I, class II extradiol dioxygenases; catalytic domain

Probab=99.68  E-value=2.9e-15  Score=112.43  Aligned_cols=116  Identities=25%  Similarity=0.344  Sum_probs=86.0

Q ss_pred             eeEEEEeCCHHHHHHHHHHhcCCEEEEEeccCCCceeeEEeeccCCCcceEEEeeecCCCCcccCCCCceEEEEEECCHH
Q 022831           25 LHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHLAIATEDVY  104 (291)
Q Consensus        25 ~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~g~~~~~i~~~v~d~~  104 (291)
                      +||.|.|+|++++++||+++||+++......+ +.....++..+.  ....+.+.....      ..++.|++|.|+|++
T Consensus         1 ~Hv~l~V~dl~~a~~Fy~~~lG~~~~~~~~~~-~~~~~~~~~~~~--~~~~l~~~~~~~------~~~~~hl~~~v~d~~   71 (131)
T cd08343           1 DHVVLRTPDVAATAAFYTEVLGFRVSDRVGDP-GVDAAAFLRCDE--DHHDLALFPGPE------RPGLHHVAFEVESLD   71 (131)
T ss_pred             CcEEEEcCCHHHHHHHHHhcCCCEEEEEEccC-CceeEEEEEcCC--CcceEEEEcCCC------CCCeeEEEEEcCCHH
Confidence            59999999999999999999999987654433 333456666543  223344433211      347889999999874


Q ss_pred             ---HHHHHHHHcCCeeeeCCccCCCCceEEEEEECCCCcEEEEEecCC
Q 022831          105 ---KMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFELIQRGP  149 (291)
Q Consensus       105 ---~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dP~G~~iel~~~~~  149 (291)
                         +++++|.++|+++...+...+.+...+++++||+|+.|||++...
T Consensus        72 ~~~~~~~~l~~~G~~i~~~~~~~~~~~~~~~~~~DPdG~~iei~~~~~  119 (131)
T cd08343          72 DILRAADRLAANGIQIEFGPGRHGPGNNLFLYFRDPDGNRVELSAEMY  119 (131)
T ss_pred             HHHHHHHHHHHcCCeeEECCCccCCCCcEEEEEECCCCCEEEEEcCCc
Confidence               788999999999887766555444455789999999999997654

This family contains the C-terminal, catalytic domain of type I, class II extradiol dioxygenases. Dioxygenases catalyze the incorporation of both atoms of molecular oxygen into substrates using a variety of reaction mechanisms, resulting in the cleavage of aromatic rings. Two major groups of dioxygenases have been identified according to the cleavage site; extradiol enzymes cleave the aromatic ring between a hydroxylated carbon and an adjacent non-hydroxylated carbon, whereas intradiol enzymes cleave the aromatic ring between two hydroxyl groups. Extradiol dioxygenases are classified into type I and type II enzymes. Type I extradiol dioxygenases include class I and class II enzymes. These two classes of enzymes show sequence similarity; the two-domain class II enzymes evolved from a class I enzyme through gene duplication. The extradiol dioxygenases represented in this family are

>cd07239 BphC5-RK37_C_like C-terminal, catalytic, domain of BphC5 (2,3-dihydroxybiphenyl 1,2-dioxygenase) from Bacterium Rhodococcus rhodochrous K37 and similar proteins

Probab=99.68  E-value=6.6e-16  Score=117.69  Aligned_cols=117  Identities=19%  Similarity=0.345  Sum_probs=86.1

Q ss_pred             CCCceeeeeeeCCchhhHHHHHHhcCCeeeeeccCcccceeeeeeccCCCCcceEEEEeEecCceeeccCceeeEEEEEe
Q 022831          151 PEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAIST  230 (291)
Q Consensus       151 ~~~~~hv~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~~hia~~v  230 (291)
                      +.++.|+.|.|+|++++++||+++|||++.....  +   ...++..+..  ...+.+...       ..+++.|++|.|
T Consensus         2 ~~~l~Hv~i~V~Dle~s~~FY~~~LG~~~~~~~~--~---~~~~l~~~~~--~~~~~l~~~-------~~~~~~hiaf~v   67 (144)
T cd07239           2 PVKISHVVLNSPDVDKTVAFYEDVLGFRVSDWLG--D---QMAFLRCNSD--HHSIAIARG-------PHPSLNHVAFEM   67 (144)
T ss_pred             CceeeEEEEECCCHHHHHHHHHhcCCCEEEEeeC--C---eEEEEECCCC--cceEEEccC-------CCCceEEEEEEC
Confidence            3468999999999999999999999999764421  1   1234443322  234454321       135789999999


Q ss_pred             cChHHHH---HHHHHHHHhhCCeeeecccccCCCCceEEEEECCCCCeEEEEechhhh
Q 022831          231 DDVYKSA---EVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNEDFL  285 (291)
Q Consensus       231 ~di~~~~---~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~~~~  285 (291)
                      +|++++.   +++    +++|+++..+|........+++||+||+||.|||++.....
T Consensus        68 ~d~~~l~~~~~~l----~~~Gi~~~~~~~~~~~~~~~~~yf~DPdG~~iE~~~~~~~~  121 (144)
T cd07239          68 PSIDEVMRGIGRM----IDKGIDILWGPGRHGPGDNTFAYFLDPGGFVIEYTSELEQV  121 (144)
T ss_pred             CCHHHHHHHHHHH----HHcCCceeeCCcccCCCCCEEEEEECCCCcEEEeccCceEE
Confidence            9988876   566    99999998877654443457789999999999999976554

2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC) catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). The enzyme contains a N-terminal and a C-terminal domain of similar structure fold, resulting from an ancient gene duplication. BphC belongs to the type I extradiol dioxygenase family, which requires a metal in the active site for its catalytic activity. Polychlorinated biphenyl degrading bacteria demonstrate multiplicity of BphCs. Bacterium Rhodococcus rhodochrous K37 has eight genes encoding BphC enzymes. This family includes the C-terminal domain of BphC5-RrK37. The crystal structure of the protein from Novosphingobium aromaticivorans has a Mn(II)in the active site, although most proteins of type I extradiol dio

>cd07266 HPCD_N_class_II N-terminal domain of 3,4-dihydroxyphenylacetate 2,3-dioxygenase (HPCD); belongs to the type I class II family of extradiol dioxygenases

Probab=99.68  E-value=1.3e-15  Score=112.61  Aligned_cols=116  Identities=23%  Similarity=0.249  Sum_probs=81.9

Q ss_pred             CccceeeEEEEeCCHHHHHHHHHHhcCCEEEEEeccCCCceeeEEeeccCCCcceEEEeeecCCCCcccCCCCceEEEEE
Q 022831           20 DKRRLLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHLAIA   99 (291)
Q Consensus        20 ~~~~i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~g~~~~~i~~~   99 (291)
                      +++++.|+.|.|+|++++++||+++|||++.....    .  ..++..........+.+...       ...+..|++|.
T Consensus         1 ~~~~i~hi~l~v~d~~~~~~Fy~~~lG~~~~~~~~----~--~~~~~~~~~~~~~~~~~~~~-------~~~~~~hi~~~   67 (121)
T cd07266           1 NILRLGHVELRVTDLEKSREFYVDVLGLVETEEDD----D--RIYLRGLEEFIHHSLVLTKA-------PVAGLGHIAFR   67 (121)
T ss_pred             CcceeeEEEEEcCCHHHHHHHHHhccCCEEeccCC----C--eEEEEecCCCceEEEEEeeC-------CCCceeEEEEE
Confidence            47899999999999999999999999999865421    1  33443211122223333221       12367899999


Q ss_pred             E---CCHHHHHHHHHHcCCeeeeCCccCCCCceEEEEEECCCCcEEEEEecC
Q 022831          100 T---EDVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFELIQRG  148 (291)
Q Consensus       100 v---~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dP~G~~iel~~~~  148 (291)
                      |   +|+++++++++++|+++...|.....+....+|+.||+|+.||++...
T Consensus        68 v~~~~dv~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~DPdG~~ve~~~~~  119 (121)
T cd07266          68 VRSEEDLDKAEAFFQELGLPTEWVEAGEEPGQGRALRVEDPLGFPIEFYAEM  119 (121)
T ss_pred             CCCHHHHHHHHHHHHHcCCCcccccCCcCCCCccEEEEECCCCCEEEEEecc
Confidence            9   479999999999999986553333333334589999999999998653

This subfamily contains the N-terminal, non-catalytic, domain of HPCD. HPCD catalyses the second step in the degradation of 4-hydroxyphenylacetate to succinate and pyruvate. The aromatic ring of 4-hydroxyphenylacetate is opened by this dioxygenase to yield the 3,4-diol product, 2-hydroxy-5-carboxymethylmuconate semialdehyde. HPCD is a homotetramer and each monomer contains two structurally homologous barrel-shaped domains at the N- and C-terminus. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism. Most extradiol dioxygenases contain Fe(II) in their active site, but HPCD can be activated by either Mn(II) or Fe(II). These enzymes belong to the type I class II family of extradiol dioxygenases. The class III 3,4-dihydroxyphenylacetate 2,3-dioxygenases belong to a differ

>PF00903 Glyoxalase: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily This Prosite is specific to glyoxalases This Prosite is specific to Extradiol ring-cleavage dioxygenases This prints entry is specific to bleomycin resistance protein

Probab=99.68  E-value=3.1e-16  Score=116.70  Aligned_cols=120  Identities=25%  Similarity=0.265  Sum_probs=80.3

Q ss_pred             CceeeeeeeCCchhhHHHHHHhcCCeeeeecc--CcccceeeeeeccCCCCcceEEEEeEecCceeecc---CceeeEEE
Q 022831          153 PLCQVMLRVGDLGRSIKFYEKALGMKLLRTID--SPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTK---GNAYAQVA  227 (291)
Q Consensus       153 ~~~hv~l~v~D~~~~~~Fy~~~lG~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~---~~g~~hia  227 (291)
                      +|+|+++.|+|++++.+||+++|||+......  .........++..+.  ....+.............   ..+.+|++
T Consensus         1 ~l~Hi~i~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~l~~~~~~~~~~~~~~~~~~~~~~i~   78 (128)
T PF00903_consen    1 GLDHIAIRVKDLEKAIDFYTDVLGFRLVEESDNDGEGGDLRIAFLRIGE--GHIELFLNPSPPPRASGHSFPEHGGHHIA   78 (128)
T ss_dssp             EEEEEEEEESCHHHHHHHHHHTTTSEEEEEEEEESTTEEEEEEEEESTS--SCEEEEEEESSSSSSEEEHHHSHTSEEEE
T ss_pred             CeEEEEEEcCCHHHHHHHHHHHhCCcEEeeeccccccccccceeecccc--cceeeeeeccccccccccccccccceeEE
Confidence            47999999999999999999999999988765  122333445555332  233333332221111000   01234555


Q ss_pred             EEe---cChHHHHHHHHHHHHhhCCeeeecccccCCCCceEEEEECCCCCeEEE
Q 022831          228 IST---DDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVL  278 (291)
Q Consensus       228 ~~v---~di~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iel  278 (291)
                      +.+   +|+++++++|    ++.|+++..+|.+.......++|++||+|+.|||
T Consensus        79 ~~~~~~~dl~~~~~~l----~~~g~~~~~~~~~~~~~~~~~~y~~Dp~G~~iE~  128 (128)
T PF00903_consen   79 FLAFDVDDLDAAYERL----KAQGVEIVEEPDRYYFGSGYSFYFRDPDGNLIEF  128 (128)
T ss_dssp             EEESSHHHHHHHHHHH----HHTTGEEEEEEEEHSTTCEEEEEEEETTSEEEEE
T ss_pred             EEeccHHHHHHHHHHH----hhcCccEEecCCCCCCCCEEEEEEECCCCCEEEC
Confidence            555   4666777777    9999999999987776555556899999999997

; InterPro: IPR004360 Glyoxalase I (4.4.1.5 from EC) (lactoylglutathione lyase) catalyzes the first step of the glyoxal pathway. S-lactoylglutathione is then converted by glyoxalase II to lactic acid []. Glyoxalase I is an ubiquitous enzyme which binds one mole of zinc per subunit. The bacterial and yeast enzymes are monomeric while the mammalian one is homodimeric. The sequence of glyoxalase I is well conserved. The domain represented by this entry is found in glyoxalase I and in other related proteins, including fosfomycin resistance proteins FosB [], FosA [], FosX [] and dioxygenases (eg. 4-hydroxyphenylpyruvate dioxygenase).; PDB: 1CJX_A 1NPB_E 3OJT_C 3OJN_A 2IG9_B 3OJJ_B 3OJK_D 1Q0C_D 1F1X_C 3BZA_B ....

>cd07256 HPCD_C_class_II C-terminal domain of 3,4-dihydroxyphenylacetate 2,3-dioxygenase (HPCD), which catalyses the second step in the degradation of 4-hydroxyphenylacetate to succinate and pyruvate; belongs to the type I class II family of extradiol dioxygenases

Probab=99.67  E-value=3.1e-15  Score=116.29  Aligned_cols=118  Identities=24%  Similarity=0.334  Sum_probs=80.3

Q ss_pred             cceeeEEEEeCCHHHHHHHHHHhcCCEEEEEeccCCCceeeEEeeccCCCcceEEEeeecCCCCcccCCCCceEEEEEEC
Q 022831           22 RRLLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHLAIATE  101 (291)
Q Consensus        22 ~~i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~g~~~~~i~~~v~  101 (291)
                      ++|+||+|.|+|++++++||+++|||++......+.+.....++.....  ...+.+...       .++++.|++|.|+
T Consensus         2 ~~l~Hv~l~V~Dl~~s~~FY~~vLGl~~~~~~~~~~~~~~~~~l~~~~~--~~~i~l~~~-------~~~~~~Hiaf~v~   72 (161)
T cd07256           2 QRLDHFNLRVPDVDAGLAYYRDELGFRVSEYTEDDDGTTWAAWLHRKGG--VHDTALTGG-------NGPRLHHVAFWVP   72 (161)
T ss_pred             ceEEEEEEecCCHHHHHHHHHhccCCEEEEEeccCCCcEEEEEEecCCC--cceEEEecC-------CCCceeEEEEEcC
Confidence            5799999999999999999999999998754433233223344443221  222333221       2347889999998


Q ss_pred             C---HHHHHHHHHHcCCee--eeCCccCCCCceEEEEEECCCCcEEEEEecC
Q 022831          102 D---VYKMVENIRAKGGNV--TREPGPLKGMTTHFAFVKDPDGYIFELIQRG  148 (291)
Q Consensus       102 d---~~~~~~~l~~~G~~~--~~~~~~~~~g~~~~~~~~dP~G~~iel~~~~  148 (291)
                      |   +++++++|+++|+..  ...|.....+...++|++||+|+.||++...
T Consensus        73 ~~~~v~~~~~~L~~~G~~~~~~~~p~~~g~~~~~~~y~~DPdG~~iEl~~~~  124 (161)
T cd07256          73 EPHNIIRTCDLLAAAGYSDRIERGPGRHGISNAFFLYLRDPDGHRIEIYTGD  124 (161)
T ss_pred             CHHHHHHHHHHHHHcCCCcccccCCCccCCCCceEEEEECCCCCeEEEeecC
Confidence            6   778889999999863  2233332222234588999999999998644

This subfamily contains the C-terminal, catalytic, domain of HPCD. HPCD catalyses the second step in the degradation of 4-hydroxyphenylacetate to succinate and pyruvate. The aromatic ring of 4-hydroxyphenylacetate is opened by this dioxygenase to yield the 3,4-diol product, 2-hydroxy-5-carboxymethylmuconate semialdehyde. HPCD is a homotetramer and each monomer contains two structurally homologous barrel-shaped domains at the N- and C-terminus. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism. Most extradiol dioxygenases contain Fe(II) in their active site, but HPCD can be activated by either Mn(II) or Fe(II). These enzymes belong to the type I class II family of

>cd07263 Glo_EDI_BRP_like_16 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.67  E-value=3e-15  Score=109.95  Aligned_cols=117  Identities=23%  Similarity=0.295  Sum_probs=82.8

Q ss_pred             eEEEEeCCHHHHHHHHHHhcCCEEEEEeccCCCceeeEEeeccCCCcceEEEeeecCCCCc--ccCCCCceEEEEEECCH
Q 022831           26 HAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTS--YDIGTGFGHLAIATEDV  103 (291)
Q Consensus        26 hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~--~~~g~~~~~i~~~v~d~  103 (291)
                      ||.|.|+|++++.+||+++|||++..+....+ ......+.... .....+.+........  ...+.+..|++|.|+|+
T Consensus         1 Hv~l~v~d~~~~~~fY~~~lG~~~~~~~~~~~-~~~~~~~~~~~-~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~di   78 (119)
T cd07263           1 LVSLYVDDQDKALAFYTEKLGFEVREDVPMGG-GFRWVTVAPPG-SPETSLVLAPPANPAAMSGLQPGGTPGLVLATDDI   78 (119)
T ss_pred             CceEEeCCHHHHHHHHHhccCeEEEEeeccCC-CcEEEEEeCCC-CCeeEEEEeCCCCccccccccCCCceEEEEEehHH
Confidence            89999999999999999999999987654222 22233333211 1134455543332211  12334677999999999


Q ss_pred             HHHHHHHHHcCCeeeeCCccCCCCceEEEEEECCCCcEEEEEe
Q 022831          104 YKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFELIQ  146 (291)
Q Consensus       104 ~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dP~G~~iel~~  146 (291)
                      ++++++|.++|+++..++....++  ..++++||+|+.|+|++
T Consensus        79 ~~~~~~l~~~g~~~~~~~~~~~~~--~~~~~~DP~G~~ie~~~  119 (119)
T cd07263          79 DATYEELKARGVEFSEEPREMPYG--TVAVFRDPDGNLFVLVQ  119 (119)
T ss_pred             HHHHHHHHhCCCEEeeccccCCCc--eEEEEECCCCCEEEEeC
Confidence            999999999999998877444443  35789999999999974

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd07263 Glo_EDI_BRP_like_16 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.67  E-value=1.1e-15  Score=112.27  Aligned_cols=117  Identities=23%  Similarity=0.323  Sum_probs=84.3

Q ss_pred             eeeeeeCCchhhHHHHHHhcCCeeeeeccCcccceeeeeeccCCCCcceEEEEeEecCcee--eccCceeeEEEEEecCh
Q 022831          156 QVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTE--YTKGNAYAQVAISTDDV  233 (291)
Q Consensus       156 hv~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~--~~~~~g~~hia~~v~di  233 (291)
                      |+.|.|+|++++.+||+++|||++.......+ ......+..++. ....+.+........  .....+..|++|.|+|+
T Consensus         1 Hv~l~v~d~~~~~~fY~~~lG~~~~~~~~~~~-~~~~~~~~~~~~-~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~di   78 (119)
T cd07263           1 LVSLYVDDQDKALAFYTEKLGFEVREDVPMGG-GFRWVTVAPPGS-PETSLVLAPPANPAAMSGLQPGGTPGLVLATDDI   78 (119)
T ss_pred             CceEEeCCHHHHHHHHHhccCeEEEEeeccCC-CcEEEEEeCCCC-CeeEEEEeCCCCccccccccCCCceEEEEEehHH
Confidence            78999999999999999999999887643222 233344442221 134455543222211  12245788999999999


Q ss_pred             HHHHHHHHHHHHhhCCeeeecccccCCCCceEEEEECCCCCeEEEEe
Q 022831          234 YKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVD  280 (291)
Q Consensus       234 ~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iel~~  280 (291)
                      +++++++    +++|+++..+|...+  .++.+|++||+||+|||++
T Consensus        79 ~~~~~~l----~~~g~~~~~~~~~~~--~~~~~~~~DP~G~~ie~~~  119 (119)
T cd07263          79 DATYEEL----KARGVEFSEEPREMP--YGTVAVFRDPDGNLFVLVQ  119 (119)
T ss_pred             HHHHHHH----HhCCCEEeeccccCC--CceEEEEECCCCCEEEEeC
Confidence            9999999    999999998874433  3688999999999999975

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd08343 ED_TypeI_classII_C C-terminal domain of type I, class II extradiol dioxygenases; catalytic domain

Probab=99.67  E-value=2.1e-15  Score=113.17  Aligned_cols=118  Identities=25%  Similarity=0.298  Sum_probs=86.9

Q ss_pred             eeeeeeeCCchhhHHHHHHhcCCeeeeeccCcccceeeeeeccCCCCcceEEEEeEecCceeeccCceeeEEEEEecChH
Q 022831          155 CQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAISTDDVY  234 (291)
Q Consensus       155 ~hv~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~~hia~~v~di~  234 (291)
                      +|+.|.|+|++++++||+++||++.......+ +.....++..++.  +..+.+....      ..+++.|++|.|+|++
T Consensus         1 ~Hv~l~V~dl~~a~~Fy~~~lG~~~~~~~~~~-~~~~~~~~~~~~~--~~~l~~~~~~------~~~~~~hl~~~v~d~~   71 (131)
T cd08343           1 DHVVLRTPDVAATAAFYTEVLGFRVSDRVGDP-GVDAAAFLRCDED--HHDLALFPGP------ERPGLHHVAFEVESLD   71 (131)
T ss_pred             CcEEEEcCCHHHHHHHHHhcCCCEEEEEEccC-CceeEEEEEcCCC--cceEEEEcCC------CCCCeeEEEEEcCCHH
Confidence            58999999999999999999999987654322 2223445554322  2345543311      1468899999999875


Q ss_pred             ---HHHHHHHHHHHhhCCeeeecccccCCCCceEEEEECCCCCeEEEEechhhh
Q 022831          235 ---KSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNEDFL  285 (291)
Q Consensus       235 ---~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~~~~  285 (291)
                         ++++++    ++.|+++..+|...+.++.++++|+||+|++|||++..+..
T Consensus        72 ~~~~~~~~l----~~~G~~i~~~~~~~~~~~~~~~~~~DPdG~~iei~~~~~~~  121 (131)
T cd08343          72 DILRAADRL----AANGIQIEFGPGRHGPGNNLFLYFRDPDGNRVELSAEMYRI  121 (131)
T ss_pred             HHHHHHHHH----HHcCCeeEECCCccCCCCcEEEEEECCCCCEEEEEcCCccc
Confidence               566777    99999998888766654567889999999999999876554

This family contains the C-terminal, catalytic domain of type I, class II extradiol dioxygenases. Dioxygenases catalyze the incorporation of both atoms of molecular oxygen into substrates using a variety of reaction mechanisms, resulting in the cleavage of aromatic rings. Two major groups of dioxygenases have been identified according to the cleavage site; extradiol enzymes cleave the aromatic ring between a hydroxylated carbon and an adjacent non-hydroxylated carbon, whereas intradiol enzymes cleave the aromatic ring between two hydroxyl groups. Extradiol dioxygenases are classified into type I and type II enzymes. Type I extradiol dioxygenases include class I and class II enzymes. These two classes of enzymes show sequence similarity; the two-domain class II enzymes evolved from a class I enzyme through gene duplication. The extradiol dioxygenases represented in this family are

>cd08347 PcpA_C_like C-terminal domain of Sphingobium chlorophenolicum 2,6-dichloro-p-hydroquinone 1,2-dioxygenase (PcpA), and similar proteins

Probab=99.67  E-value=1.8e-15  Score=116.89  Aligned_cols=117  Identities=16%  Similarity=0.113  Sum_probs=83.3

Q ss_pred             CceeeeeeeCCchhhHHHHHHhcCCeeeeeccCcccceeeeeeccCCCCcceEEEEeEecCcee-eccCceeeEEEEEec
Q 022831          153 PLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTE-YTKGNAYAQVAISTD  231 (291)
Q Consensus       153 ~~~hv~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~-~~~~~g~~hia~~v~  231 (291)
                      .++|+.|.|+|++++.+||+++|||++.....   +  ...+...+. ..+..|.+........ .....++.|++|.|+
T Consensus         1 gl~HI~i~V~Dle~s~~FY~~~LG~~~~~~~~---~--~~~~~~~~~-~~~~~l~l~~~~~~~~~~~~~~~l~Hiaf~v~   74 (157)
T cd08347           1 GLHGVTLTVRDPEATAAFLTDVLGFREVGEEG---D--RVRLEEGGG-GPGAVVDVLEEPDQPRGRPGAGTVHHVAFRVP   74 (157)
T ss_pred             CcccEEEEeCCHHHHHHHHHHhcCCEEEeeeC---C--EEEEEecCC-CCCCEEEEEeCCCCCCCcccCCceEEEEEECC
Confidence            37899999999999999999999999876542   1  222322211 1245677655322211 122357899999999


Q ss_pred             C---hHHHHHHHHHHHHhhCCeeeecccccCCCCceEEEEECCCCCeEEEEech
Q 022831          232 D---VYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNE  282 (291)
Q Consensus       232 d---i~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~  282 (291)
                      |   ++++++++    +++|+++. .+....  ..+.+||+|||||.|||++..
T Consensus        75 d~~dvd~~~~~L----~~~Gv~~~-~~~~~~--~~~s~yf~DPdG~~iEl~~~~  121 (157)
T cd08347          75 DDEELEAWKERL----EALGLPVS-GIVDRF--YFKSLYFREPGGILFEIATDG  121 (157)
T ss_pred             CHHHHHHHHHHH----HHCCCCcc-cccccc--cEEEEEEECCCCcEEEEEECC
Confidence            8   88888999    99999864 333333  357899999999999999965

The C-terminal domain of Sphingobium chlorophenolicum (formerly Sphingomonas chlorophenolica) 2,6-dichloro-p-hydroquinone 1,2-dioxygenase (PcpA), and similar proteins. PcpA is a key enzyme in the pentachlorophenol (PCP) degradation pathway, catalyzing the conversion of 2,6-dichloro-p-hydroquinone to 2-chloromaleylacetate. This domain belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases.

>cd09014 BphC-JF8_C_like C-terminal, catalytic, domain of BphC_JF8, (2,3-dihydroxybiphenyl 1,2-dioxygenase) from Bacillus sp

Probab=99.67  E-value=1.7e-15  Score=118.20  Aligned_cols=120  Identities=21%  Similarity=0.193  Sum_probs=83.7

Q ss_pred             CCceeeeeeeCCchhhHHHHHHhcCCeeeeeccCcccceeeeeeccCCCCcceEEEEeEecCceeeccCceeeEEEEEec
Q 022831          152 EPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAISTD  231 (291)
Q Consensus       152 ~~~~hv~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~~hia~~v~  231 (291)
                      .+|+|+.|.|+|++++++||+++|||++........+.....++.....  ...+.+.....    ...++++|++|.|+
T Consensus         5 ~~i~Hi~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~~~~--~~~i~l~~~~~----~~~~~~~hiaf~v~   78 (166)
T cd09014           5 RRLDHVNLLASDVDANRDFMEEVLGFRLREQIRLDNGKEAGAWMSVSNK--VHDVAYTRDPA----GARGRLHHLAYALD   78 (166)
T ss_pred             ceeeeEEEEcCCHHHHHHHHHHccCCEEEEEEecCCCceEEEEEeCCCC--ceeEEEecCCC----CCCCCceEEEEECC
Confidence            4689999999999999999999999998765433222222334443221  23344322111    12346899999998


Q ss_pred             ChH---HHHHHHHHHHHhhCCeeeecccccCCCCceEEEEECCCCCeEEEEec
Q 022831          232 DVY---KSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDN  281 (291)
Q Consensus       232 di~---~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iel~~~  281 (291)
                      |.+   ++++++    ++.|+++..+|..+......++|++|||||+|||+..
T Consensus        79 ~~~~l~~~~~~l----~~~Gv~i~~~p~~~~~~~~~~~y~~DPdG~~iEl~~~  127 (166)
T cd09014          79 TREDVLRAADIF----LENGIFIEAGPGKHGIQQTFFLYVYEPGGNRVELFGG  127 (166)
T ss_pred             CHHHHHHHHHHH----HHcCCccccCCcccCCCCceEEEEECCCCCEEEEEEc
Confidence            755   556667    9999998877776554344568999999999999987

JF8 and similar proteins. 2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC) catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, a key step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). BphC belongs to the type I extradiol dioxygenase family, which requires a metal ion in the active site in its catalytic mechanism. Polychlorinated biphenyl degrading bacteria demonstrate a multiplicity of BphCs. This subfamily of BphC is represented by the enzyme purified from the thermophilic biphenyl and naphthalene degrader, Bacillus sp. JF8. The members in this family of BphC enzymes may use either Mn(II) or Fe(II) as cofactors. The enzyme purified from Bacillus sp. JF8 is Mn(II)-dependent, however, the enzyme from Rhodococcus jostii RHAI has Fe(II) bound to it. BphC_JF8 is thermostable and its optimum activity is at 85 degrees C. Th

>cd07239 BphC5-RK37_C_like C-terminal, catalytic, domain of BphC5 (2,3-dihydroxybiphenyl 1,2-dioxygenase) from Bacterium Rhodococcus rhodochrous K37 and similar proteins

Probab=99.67  E-value=3e-15  Score=114.09  Aligned_cols=114  Identities=19%  Similarity=0.392  Sum_probs=83.4

Q ss_pred             cceeeEEEEeCCHHHHHHHHHHhcCCEEEEEeccCCCceeeEEeeccCCCcceEEEeeecCCCCcccCCCCceEEEEEEC
Q 022831           22 RRLLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHLAIATE  101 (291)
Q Consensus        22 ~~i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~g~~~~~i~~~v~  101 (291)
                      .+|+|+.|.|+|++++++||+++|||++.....  .   ...++..+...  ..+.+...       ...++.|++|.|+
T Consensus         3 ~~l~Hv~i~V~Dle~s~~FY~~~LG~~~~~~~~--~---~~~~l~~~~~~--~~~~l~~~-------~~~~~~hiaf~v~   68 (144)
T cd07239           3 VKISHVVLNSPDVDKTVAFYEDVLGFRVSDWLG--D---QMAFLRCNSDH--HSIAIARG-------PHPSLNHVAFEMP   68 (144)
T ss_pred             ceeeEEEEECCCHHHHHHHHHhcCCCEEEEeeC--C---eEEEEECCCCc--ceEEEccC-------CCCceEEEEEECC
Confidence            479999999999999999999999999865422  1   24566554322  23333321       1237889999999


Q ss_pred             CHHHHH---HHHHHcCCeeeeCCccCCCCceEEEEEECCCCcEEEEEecCC
Q 022831          102 DVYKMV---ENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFELIQRGP  149 (291)
Q Consensus       102 d~~~~~---~~l~~~G~~~~~~~~~~~~g~~~~~~~~dP~G~~iel~~~~~  149 (291)
                      |++++.   ++|.++|+++...+.....+...++||+||+|+.|||++...
T Consensus        69 d~~~l~~~~~~l~~~Gi~~~~~~~~~~~~~~~~~yf~DPdG~~iE~~~~~~  119 (144)
T cd07239          69 SIDEVMRGIGRMIDKGIDILWGPGRHGPGDNTFAYFLDPGGFVIEYTSELE  119 (144)
T ss_pred             CHHHHHHHHHHHHHcCCceeeCCcccCCCCCEEEEEECCCCcEEEeccCce
Confidence            977775   899999999876654443333445889999999999998753

2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC) catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). The enzyme contains a N-terminal and a C-terminal domain of similar structure fold, resulting from an ancient gene duplication. BphC belongs to the type I extradiol dioxygenase family, which requires a metal in the active site for its catalytic activity. Polychlorinated biphenyl degrading bacteria demonstrate multiplicity of BphCs. Bacterium Rhodococcus rhodochrous K37 has eight genes encoding BphC enzymes. This family includes the C-terminal domain of BphC5-RrK37. The crystal structure of the protein from Novosphingobium aromaticivorans has a Mn(II)in the active site, although most proteins of type I extradiol dio

>cd07264 Glo_EDI_BRP_like_15 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.67  E-value=4e-15  Score=110.56  Aligned_cols=117  Identities=21%  Similarity=0.296  Sum_probs=80.0

Q ss_pred             eeeEEEEeCCHHHHHHHHHHhcCCEEEEEeccCCCceeeEEeeccCCCcceEEEeee---c---CCC--CcccCCCCceE
Q 022831           24 LLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTY---N---YGV--TSYDIGTGFGH   95 (291)
Q Consensus        24 i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~---~---~~~--~~~~~g~~~~~   95 (291)
                      +.|+.|.|+|++++.+||+++|||++.....  .+.+  ..+..+  ...+.+....   .   ...  .......+..+
T Consensus         1 ~~~~~l~v~D~~~s~~FY~~~lG~~~~~~~~--~~~~--~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   74 (125)
T cd07264           1 FGYTIIYVEDVEKTLEFYERAFGFERRFLHE--SGDY--GELETG--ETTLAFASHDLAESNLKGGFVKADPAQPPAGFE   74 (125)
T ss_pred             CceEEEEEcCHHHHHHHHHHhhCCeEEeecC--CCcE--EEecCC--cEEEEEEcccccccccccCccCCccccCCCcEE
Confidence            5799999999999999999999999865322  1111  112211  1121111110   0   000  11111224468


Q ss_pred             EEEEECCHHHHHHHHHHcCCeeeeCCccCCCCceEEEEEECCCCcEEEEEec
Q 022831           96 LAIATEDVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFELIQR  147 (291)
Q Consensus        96 i~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dP~G~~iel~~~  147 (291)
                      ++|.|+|++++++++.++|+++..++...++|.+ .++++||+|+.|++.++
T Consensus        75 ~~~~v~di~~~~~~l~~~G~~~~~~~~~~~~g~~-~~~~~DPdG~~~~~~~~  125 (125)
T cd07264          75 IAFVTDDVAAAFARAVEAGAVLVSEPKEKPWGQT-VAYVRDINGFLIELCSP  125 (125)
T ss_pred             EEEEcCCHHHHHHHHHHcCCEeccCCccCCCCcE-EEEEECCCCCEEEEecC
Confidence            9999999999999999999999888877888765 47899999999999863

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd07249 MMCE Methylmalonyl-CoA epimerase (MMCE)

Probab=99.66  E-value=2.7e-15  Score=111.80  Aligned_cols=119  Identities=27%  Similarity=0.475  Sum_probs=85.5

Q ss_pred             eeeEEEEeCCHHHHHHHHHHhcCCEEEEEeccC-CCceeeEEeeccCCCcceEEEeeecCCC-Cc-----ccCCCCceEE
Q 022831           24 LLHAVYRVGDLDRTIKYYTECFGMELLRKRDVP-EEKYSNAFLGFGPEQSYFVVELTYNYGV-TS-----YDIGTGFGHL   96 (291)
Q Consensus        24 i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~l~~~~~~-~~-----~~~g~~~~~i   96 (291)
                      |+||.|.|+|++++.+||+++|||++....... .+.....++..+    ...+++.++... ..     ...+++..|+
T Consensus         1 ~~hv~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~----~~~l~l~~~~~~~~~~~~~~~~~~~g~~h~   76 (128)
T cd07249           1 IDHIGIAVPDLEAAIKFYRDVLGVGPWEEEEVPPEQGVRVAFLGLG----NVQIELIEPLDDDSPIAKFLEKRGEGLHHI   76 (128)
T ss_pred             CcEEEEEeCCHHHHHHHHHHhhCCCCccccccCcccccEEEEEEcC----CEEEEEEEECCCCCcHHHHHhcCCCceEEE
Confidence            589999999999999999999999997654432 233445566532    344555543221 11     1346788999


Q ss_pred             EEEECCHHHHHHHHHHcCCeeeeCCccCCCCceEEEEEECCC--CcEEEEEe
Q 022831           97 AIATEDVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPD--GYIFELIQ  146 (291)
Q Consensus        97 ~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dP~--G~~iel~~  146 (291)
                      +|.|+|++++++++.++|+++..++.....+...+.++.+|+  |+.|||++
T Consensus        77 ~f~v~d~~~~~~~l~~~G~~~~~~~~~~~~~g~~~~~~d~~~~~g~~iE~~~  128 (128)
T cd07249          77 AFEVDDIDAALARLKAQGVRLLQEGPRIGAGGKRVAFLHPKDTGGVLIELVE  128 (128)
T ss_pred             EEEeCCHHHHHHHHHHCCCeeeccCCCccCCCCEEEEEecCCCceEEEEecC
Confidence            999999999999999999998877764444444445555555  99999975

MMCE, also called methylmalonyl-CoA racemase (EC 5.1.99.1) interconverts (2R)-methylmalonyl-CoA and (2S)-methylmalonyl-CoA. MMCE has been found in bacteria, archaea, and in animals. In eukaryotes, MMCE is an essential enzyme in a pathway that converts propionyl-CoA to succinyl-CoA, and is important in the breakdown of odd-chain length fatty acids, branched-chain amino acids, and other metabolites. In bacteria, MMCE participates in the reverse pathway for propionate fermentation, glyoxylate regeneration, and the biosynthesis of polyketide antibiotics. MMCE is closely related to glyoxalase I and type I extradiol dioxygenases.

>cd08363 FosB FosB, a fosfomycin resistance protein, catalyzes the Mg(II) dependent addition of L-cysteine to the epoxide ring of fosfomycin

Probab=99.66  E-value=1.3e-15  Score=114.33  Aligned_cols=115  Identities=23%  Similarity=0.256  Sum_probs=81.5

Q ss_pred             ceeeeeeeCCchhhHHHHHHhcCCeeeeeccCcccceeeeeeccCCCCcceEEEEeEecCceeeccCceeeEEEEEecC-
Q 022831          154 LCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAISTDD-  232 (291)
Q Consensus       154 ~~hv~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~~hia~~v~d-  232 (291)
                      |+||.|.|+|++++++||+++|||++....  +.  .  .++..+    ...+.+.............++.|++|.|++ 
T Consensus         1 i~HV~l~V~Dl~~a~~FY~~~LG~~~~~~~--~~--~--~~~~~~----~~~l~l~~~~~~~~~~~~~~~~hiaf~v~~~   70 (131)
T cd08363           1 INHMTFSVSNLDKSISFYKHVFMEKLLVLG--EK--T--AYFTIG----GTWLALNEEPDIPRNEIRQSYTHIAFTIEDS   70 (131)
T ss_pred             CceEEEEECCHHHHHHHHHHhhCCEEeccC--Cc--c--ceEeeC----ceEEEEEccCCCCcCCcCccceEEEEEecHH
Confidence            689999999999999999999999975431  11  1  122222    244555332221111123478999999974 


Q ss_pred             -hHHHHHHHHHHHHhhCCeeeecccccCCCCceEEEEECCCCCeEEEEechh
Q 022831          233 -VYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNED  283 (291)
Q Consensus       233 -i~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~~  283 (291)
                       ++++++++    +++|+++..+|....+ +.+.+||+|||||+|||.+...
T Consensus        71 dld~~~~~l----~~~G~~~~~~~~~~~~-~~~~~~f~DPdG~~iEl~~~~~  117 (131)
T cd08363          71 EFDAFYTRL----KEAGVNILPGRKRDVR-DRKSIYFTDPDGHKLEVHTGTL  117 (131)
T ss_pred             HHHHHHHHH----HHcCCcccCCCccccC-cceEEEEECCCCCEEEEecCcH
Confidence             89999999    9999998765544433 4678999999999999998654

This subfamily family contains FosB, a fosfomycin resistant protein. Fosfomycin inhibits the enzyme UDP-Nacetylglucosamine-3-enolpyruvyltransferase (MurA), which catalyzes the first committed step in bacterial cell wall biosynthesis. FosB catalyzes the Mg(II) dependent addition of L-cysteine to the epoxide ring of fosfomycin, (1R,2S)-epoxypropylphosphonic acid, rendering it inactive. FosB is evolutionarily related to glyoxalase I and type I extradiol dioxygenases

>cd07255 Glo_EDI_BRP_like_12 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.66  E-value=7.9e-15  Score=108.99  Aligned_cols=117  Identities=24%  Similarity=0.372  Sum_probs=84.4

Q ss_pred             cceeeEEEEeCCHHHHHHHHHHhcCCEEEEEeccCCCceeeEEeeccCCCcceEEEeeecCCC-CcccCCCCceEEEEEE
Q 022831           22 RRLLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGV-TSYDIGTGFGHLAIAT  100 (291)
Q Consensus        22 ~~i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~-~~~~~g~~~~~i~~~v  100 (291)
                      ++|+|+.|.|+|++++.+||+++|||++.....      ..+++..++  ....+.+...... .......+..|++|.|
T Consensus         1 ~~i~hi~l~v~d~~~~~~Fy~~~lG~~~~~~~~------~~~~l~~~~--~~~~l~l~~~~~~~~~~~~~~~~~hi~f~v   72 (125)
T cd07255           1 TRIGAVTLRVADLERSLAFYQDVLGLEVLERTD------STAVLGTGG--KRPLLVLEEDPDAPPAPPGATGLYHFAILL   72 (125)
T ss_pred             CEEEEEEEEECCHHHHHHHHHhccCcEEEEcCC------CEEEEecCC--CeEEEEEEeCCCCCcccCCCCcEEEEEEEC
Confidence            579999999999999999999999999986521      145555432  2344555443322 1222344788999999


Q ss_pred             CC---HHHHHHHHHHcCCeeeeCCccCCCCceEEEEEECCCCcEEEEEecCC
Q 022831          101 ED---VYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFELIQRGP  149 (291)
Q Consensus       101 ~d---~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dP~G~~iel~~~~~  149 (291)
                      +|   +++++++|.++|+++... .....  ...+|++||+|++||+....+
T Consensus        73 ~~~~~v~~~~~~l~~~g~~~~~~-~~~~~--~~~~~~~DPdG~~iEi~~~~~  121 (125)
T cd07255          73 PSRADLAAALRRLIELGIPLVGA-SDHLV--SEALYLSDPEGNGIEIYADRP  121 (125)
T ss_pred             CCHHHHHHHHHHHHHcCCceecc-ccccc--eeEEEEECCCCCEEEEEEecC
Confidence            74   899999999999987543 22222  235789999999999987654

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd08355 Glo_EDI_BRP_like_14 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.66  E-value=6.8e-15  Score=108.94  Aligned_cols=115  Identities=23%  Similarity=0.264  Sum_probs=83.5

Q ss_pred             EEEEeCCHHHHHHHHHHhcCCEEEEEeccCCCceeeEEeeccCCCcceEEEeeecCCCCc----ccCCCCceEEEEEECC
Q 022831           27 AVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTS----YDIGTGFGHLAIATED  102 (291)
Q Consensus        27 v~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~----~~~g~~~~~i~~~v~d  102 (291)
                      -.|.|+|++++.+||+++|||++......+++......+..+  +..+.+  ........    ...+.+..+++|.|+|
T Consensus         3 p~l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~--~~~~~l--~~~~~~~~~~~~~~~~~~~~~~~~~v~d   78 (122)
T cd08355           3 PTLRYRDAAAAIDWLTDAFGFEERLVVPDDDGGVAHAELRFG--DGGVMV--GSVRDDYRASSARAGGAGTQGVYVVVDD   78 (122)
T ss_pred             EEEEECCHHHHHHHHHHhcCCEEEEEEeCCCCcEEEEEEEEC--CEEEEE--ecCCCcccccccccCCCceEEEEEEECC
Confidence            468899999999999999999998765333443334445543  222333  22111111    1233456789999999


Q ss_pred             HHHHHHHHHHcCCeeeeCCccCCCCceEEEEEECCCCcEEEEEe
Q 022831          103 VYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFELIQ  146 (291)
Q Consensus       103 ~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dP~G~~iel~~  146 (291)
                      ++++++++.++|+++..++...++|.+. ++++||+|+.|+|.+
T Consensus        79 ~d~~~~~l~~~G~~v~~~~~~~~~g~~~-~~~~DPdG~~~~l~~  121 (122)
T cd08355          79 VDAHYERARAAGAEILREPTDTPYGSRE-FTARDPEGNLWTFGT  121 (122)
T ss_pred             HHHHHHHHHHCCCEEeeCccccCCCcEE-EEEECCCCCEEEEec
Confidence            9999999999999999888888887664 789999999999864

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The structures of this family demonstrate domain swapping, which is shared by glyoxalase I and antibiotic resistance proteins.

>cd07249 MMCE Methylmalonyl-CoA epimerase (MMCE)

Probab=99.66  E-value=2.2e-15  Score=112.31  Aligned_cols=119  Identities=22%  Similarity=0.330  Sum_probs=85.7

Q ss_pred             ceeeeeeeCCchhhHHHHHHhcCCeeeeeccCc-ccceeeeeeccCCCCcceEEEEeEecCce-e-----eccCceeeEE
Q 022831          154 LCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSP-ELKCALAMLGYAEEDQTTVLELAYSYGVT-E-----YTKGNAYAQV  226 (291)
Q Consensus       154 ~~hv~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~l~~~~~~~-~-----~~~~~g~~hi  226 (291)
                      +.|++|.|+|++++.+||+++|||+........ .......++..+    ...+++....... +     ...++|..|+
T Consensus         1 ~~hv~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~----~~~l~l~~~~~~~~~~~~~~~~~~~g~~h~   76 (128)
T cd07249           1 IDHIGIAVPDLEAAIKFYRDVLGVGPWEEEEVPPEQGVRVAFLGLG----NVQIELIEPLDDDSPIAKFLEKRGEGLHHI   76 (128)
T ss_pred             CcEEEEEeCCHHHHHHHHHHhhCCCCccccccCcccccEEEEEEcC----CEEEEEEEECCCCCcHHHHHhcCCCceEEE
Confidence            579999999999999999999999987654432 223445555532    3556665432211 1     1235788999


Q ss_pred             EEEecChHHHHHHHHHHHHhhCCeeeecccccCCCCceEEEEECCC--CCeEEEEe
Q 022831          227 AISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPD--GWKTVLVD  280 (291)
Q Consensus       227 a~~v~di~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DPd--G~~iel~~  280 (291)
                      +|.|+|++++++++    .+.|+++..+|......+.++.++.+|+  |+.|||++
T Consensus        77 ~f~v~d~~~~~~~l----~~~G~~~~~~~~~~~~~g~~~~~~d~~~~~g~~iE~~~  128 (128)
T cd07249          77 AFEVDDIDAALARL----KAQGVRLLQEGPRIGAGGKRVAFLHPKDTGGVLIELVE  128 (128)
T ss_pred             EEEeCCHHHHHHHH----HHCCCeeeccCCCccCCCCEEEEEecCCCceEEEEecC
Confidence            99999999999999    9999999988764444333444444444  99999985

MMCE, also called methylmalonyl-CoA racemase (EC 5.1.99.1) interconverts (2R)-methylmalonyl-CoA and (2S)-methylmalonyl-CoA. MMCE has been found in bacteria, archaea, and in animals. In eukaryotes, MMCE is an essential enzyme in a pathway that converts propionyl-CoA to succinyl-CoA, and is important in the breakdown of odd-chain length fatty acids, branched-chain amino acids, and other metabolites. In bacteria, MMCE participates in the reverse pathway for propionate fermentation, glyoxylate regeneration, and the biosynthesis of polyketide antibiotics. MMCE is closely related to glyoxalase I and type I extradiol dioxygenases.

>PRK06724 hypothetical protein; Provisional

Probab=99.66  E-value=3.9e-15  Score=110.90  Aligned_cols=112  Identities=18%  Similarity=0.226  Sum_probs=77.3

Q ss_pred             CccceeeEEEEeCCHHHHHHHHHHhc---CCEEEEEeccCCCceeeEEeeccCCCcceEEEeeecCCCCcccCCCCceEE
Q 022831           20 DKRRLLHAVYRVGDLDRTIKYYTECF---GMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHL   96 (291)
Q Consensus        20 ~~~~i~hv~l~v~d~~~~~~FY~~~l---G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~g~~~~~i   96 (291)
                      |+.+|+||.|.|+|++++++||+++|   |++.....         .+ .  ...  ..+.+......  .....+..|+
T Consensus         4 ~~~~i~Hv~l~V~Dle~s~~FY~~vlg~lg~~~~~~~---------~~-~--~g~--~~l~l~~~~~~--~~~~~g~~h~   67 (128)
T PRK06724          4 LRAGIHHIEFWVANLEESISFYDMLFSIIGWRKLNEV---------AY-S--TGE--SEIYFKEVDEE--IVRTLGPRHI   67 (128)
T ss_pred             cCcccCEEEEEeCCHHHHHHHHHHHHhhCCcEEeeeE---------ee-e--CCC--eeEEEecCCcc--ccCCCCceeE
Confidence            67899999999999999999999966   66653210         11 1  111  11222111110  1123367899


Q ss_pred             EEEE---CCHHHHHHHHHHcCCeeeeCCccCC---CCceEEEEEECCCCcEEEEEecC
Q 022831           97 AIAT---EDVYKMVENIRAKGGNVTREPGPLK---GMTTHFAFVKDPDGYIFELIQRG  148 (291)
Q Consensus        97 ~~~v---~d~~~~~~~l~~~G~~~~~~~~~~~---~g~~~~~~~~dP~G~~iel~~~~  148 (291)
                      ||.|   +|+++++++|.++|+++..+|...+   +|. ..++|+||||+.||+...+
T Consensus        68 af~v~~~~dvd~~~~~l~~~G~~~~~~p~~~~~~~~g~-~~~~f~DPdG~~iEl~~~~  124 (128)
T PRK06724         68 CYQAINRKVVDEVAEFLSSTKIKIIRGPMEMNHYSEGY-YTIDFYDPNGFIIEVAYTP  124 (128)
T ss_pred             EEecCChHHHHHHHHHHHHCCCEEecCCcccCCCCCCE-EEEEEECCCCCEEEEEeCC
Confidence            9998   6799999999999999877765543   332 4578999999999998763

>cd08355 Glo_EDI_BRP_like_14 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.66  E-value=4.3e-15  Score=110.02  Aligned_cols=115  Identities=20%  Similarity=0.202  Sum_probs=82.4

Q ss_pred             eeeeeCCchhhHHHHHHhcCCeeeeeccCcccceeeeeeccCCCCcceEEEEeEecCceee----ccCceeeEEEEEecC
Q 022831          157 VMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEY----TKGNAYAQVAISTDD  232 (291)
Q Consensus       157 v~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~----~~~~g~~hia~~v~d  232 (291)
                      -.|.|+|++++.+||+++||+++......+++......+..+    ...+.+.........    ...++..|++|.|+|
T Consensus         3 p~l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~----~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~d   78 (122)
T cd08355           3 PTLRYRDAAAAIDWLTDAFGFEERLVVPDDDGGVAHAELRFG----DGGVMVGSVRDDYRASSARAGGAGTQGVYVVVDD   78 (122)
T ss_pred             EEEEECCHHHHHHHHHHhcCCEEEEEEeCCCCcEEEEEEEEC----CEEEEEecCCCcccccccccCCCceEEEEEEECC
Confidence            468899999999999999999987765333332222233322    123333322211111    123467899999999


Q ss_pred             hHHHHHHHHHHHHhhCCeeeecccccCCCCceEEEEECCCCCeEEEEe
Q 022831          233 VYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVD  280 (291)
Q Consensus       233 i~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iel~~  280 (291)
                      ++++++++    .++|+++..+|...+. +.+.++++|||||+|+|.+
T Consensus        79 ~d~~~~~l----~~~G~~v~~~~~~~~~-g~~~~~~~DPdG~~~~l~~  121 (122)
T cd08355          79 VDAHYERA----RAAGAEILREPTDTPY-GSREFTARDPEGNLWTFGT  121 (122)
T ss_pred             HHHHHHHH----HHCCCEEeeCccccCC-CcEEEEEECCCCCEEEEec
Confidence            99999999    9999999998887775 4688999999999999975

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The structures of this family demonstrate domain swapping, which is shared by glyoxalase I and antibiotic resistance proteins.

>cd07240 ED_TypeI_classII_N N-terminal domain of type I, class II extradiol dioxygenases; non-catalytic domain

Probab=99.66  E-value=7.4e-15  Score=107.77  Aligned_cols=112  Identities=24%  Similarity=0.418  Sum_probs=84.9

Q ss_pred             cceeeEEEEeCCHHHHHHHHHHhcCCEEEEEeccCCCceeeEEeeccCCCcceEEEeeecCCCCcccCCCCceEEEEEEC
Q 022831           22 RRLLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHLAIATE  101 (291)
Q Consensus        22 ~~i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~g~~~~~i~~~v~  101 (291)
                      ++|+|+.|.|+|++++++||+++|||++.....      ...++..+. ...+.+.+....       ..+..|++|.|+
T Consensus         1 ~~l~hv~l~v~d~~~~~~FY~~~lg~~~~~~~~------~~~~~~~~~-~~~~~~~~~~~~-------~~~~~h~~~~v~   66 (117)
T cd07240           1 RRIAYAELEVPDLERALEFYTDVLGLTVLDRDA------GSVYLRCSE-DDHHSLVLTEGD-------EPGVDALGFEVA   66 (117)
T ss_pred             CceeEEEEecCCHHHHHHHHHhccCcEEEeecC------CeEEEecCC-CCcEEEEEEeCC-------CCCceeEEEEcC
Confidence            579999999999999999999999999986532      145665532 233444443321       236789999997


Q ss_pred             ---CHHHHHHHHHHcCCeeeeCCccCCCCceEEEEEECCCCcEEEEEecC
Q 022831          102 ---DVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFELIQRG  148 (291)
Q Consensus       102 ---d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dP~G~~iel~~~~  148 (291)
                         ++++++++|.++|+++...+...+++.+ .+++.||+|+.+|++...
T Consensus        67 ~~~~v~~~~~~l~~~g~~~~~~~~~~~~~~~-~~~~~DP~G~~ie~~~~~  115 (117)
T cd07240          67 SEEDLEALAAHLEAAGVAPEEASDPEPGVGR-GLRFQDPDGHLLELFVEA  115 (117)
T ss_pred             CHHHHHHHHHHHHHcCCceEEcCccCCCCce-EEEEECCCCCEEEEEEcc
Confidence               6889999999999998877654555444 478999999999998653

This family contains the N-terminal, non-catalytic, domain of type I, class II extradiol dioxygenases. Dioxygenases catalyze the incorporation of both atoms of molecular oxygen into substrates using a variety of reaction mechanisms, resulting in the cleavage of aromatic rings. Two major groups of dioxygenases have been identified according to the cleavage site; extradiol enzymes cleave the aromatic ring between a hydroxylated carbon and an adjacent non-hydroxylated carbon, whereas intradiol enzymes cleave the aromatic ring between two hydroxyl groups. Extradiol dioxygenases are classified into type I and type II enzymes. Type I extradiol dioxygenases include class I and class II enzymes. These two classes of enzymes show sequence similarity; the two-domain class II enzymes evolved from a class I enzyme through gene duplication. The extradiol dioxygenases represented in this fa

>cd08351 ChaP_like ChaP, an enzyme involved in the biosynthesis of the antitumor agent chartreusin (cha); and similar proteins

Probab=99.66  E-value=6.2e-15  Score=109.37  Aligned_cols=112  Identities=18%  Similarity=0.253  Sum_probs=80.6

Q ss_pred             CccceeeEEEEeCCHHHHHHHHHHhcCCEEEEEeccCCCceeeEEeeccCCCcceEEEeeecCCCCcccCCCCceEEEEE
Q 022831           20 DKRRLLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHLAIA   99 (291)
Q Consensus        20 ~~~~i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~g~~~~~i~~~   99 (291)
                      |..+++|+.|.|+|++++++||+++|||++....    +.  ..++..++   ...+.+....      ...+..|++|.
T Consensus         1 ~~~~~~hv~l~v~Dl~~s~~FY~~~lG~~~~~~~----~~--~~~~~~~~---~~~l~~~~~~------~~~~~~h~a~~   65 (123)
T cd08351           1 MTVTLNHTIVPARDREASAEFYAEILGLPWAKPF----GP--FAVVKLDN---GVSLDFAQPD------GEIPPQHYAFL   65 (123)
T ss_pred             CcceEeEEEEEcCCHHHHHHHHHHhcCCEeeecc----CC--EEEEEcCC---CcEEEEecCC------CCCCcceEEEE
Confidence            4578999999999999999999999999986521    11  22333222   2334443321      11245789998


Q ss_pred             EC--CHHHHHHHHHHcCCeeeeCCccC-------CCCceEEEEEECCCCcEEEEEec
Q 022831          100 TE--DVYKMVENIRAKGGNVTREPGPL-------KGMTTHFAFVKDPDGYIFELIQR  147 (291)
Q Consensus       100 v~--d~~~~~~~l~~~G~~~~~~~~~~-------~~g~~~~~~~~dP~G~~iel~~~  147 (291)
                      |+  |+++++++|.++|+++...|...       .+|.+ .++|+||+|+.||+++.
T Consensus        66 v~~~dl~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~g~~-~~~f~DPdG~~iEl~~~  121 (123)
T cd08351          66 VSEEEFDRIFARIRERGIDYWADPQRTEPGQINTNDGGR-GVYFLDPDGHLLEIITR  121 (123)
T ss_pred             eCHHHHHHHHHHHHHcCCceecCCcccccccccCCCCee-EEEEECCCCCEEEEEec
Confidence            86  69999999999999986655443       24444 58999999999999976

ChaP is an enzyme involved in the biosynthesis of the potent antitumor agent chartreusin (cha). Cha is an aromatic polyketide glycoside produced by Streptomyces chartreusis. ChaP may play a role as a meta-cleavage dioxygenase in the oxidative rearrangement of the anthracyclic polyketide. ChaP belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases.

>PRK06724 hypothetical protein; Provisional

Probab=99.66  E-value=2e-15  Score=112.46  Aligned_cols=111  Identities=18%  Similarity=0.226  Sum_probs=76.7

Q ss_pred             CCceeeeeeeCCchhhHHHHHHhc---CCeeeeeccCcccceeeeeeccCCCCcceEEEEeEecCceeeccCceeeEEEE
Q 022831          152 EPLCQVMLRVGDLGRSIKFYEKAL---GMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAI  228 (291)
Q Consensus       152 ~~~~hv~l~v~D~~~~~~Fy~~~l---G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~~hia~  228 (291)
                      ..++||+|.|+|++++.+||+++|   |++.........+.              ..+.+.....  ......|..|+||
T Consensus         6 ~~i~Hv~l~V~Dle~s~~FY~~vlg~lg~~~~~~~~~~~g~--------------~~l~l~~~~~--~~~~~~g~~h~af   69 (128)
T PRK06724          6 AGIHHIEFWVANLEESISFYDMLFSIIGWRKLNEVAYSTGE--------------SEIYFKEVDE--EIVRTLGPRHICY   69 (128)
T ss_pred             cccCEEEEEeCCHHHHHHHHHHHHhhCCcEEeeeEeeeCCC--------------eeEEEecCCc--cccCCCCceeEEE
Confidence            469999999999999999999966   55543211101111              1122211000  0112347789999


Q ss_pred             Ee---cChHHHHHHHHHHHHhhCCeeeecccccC--CCCceEEEEECCCCCeEEEEech
Q 022831          229 ST---DDVYKSAEVVNLVTQELGGKITRQPGPIP--GLNTKITSFVDPDGWKTVLVDNE  282 (291)
Q Consensus       229 ~v---~di~~~~~~l~~~~~~~G~~~~~~p~~~~--~~~~~~~~~~DPdG~~iel~~~~  282 (291)
                      .|   +|++++++++    +++|+++..+|...+  +.+.+.+||+|||||.|||+..+
T Consensus        70 ~v~~~~dvd~~~~~l----~~~G~~~~~~p~~~~~~~~g~~~~~f~DPdG~~iEl~~~~  124 (128)
T PRK06724         70 QAINRKVVDEVAEFL----SSTKIKIIRGPMEMNHYSEGYYTIDFYDPNGFIIEVAYTP  124 (128)
T ss_pred             ecCChHHHHHHHHHH----HHCCCEEecCCcccCCCCCCEEEEEEECCCCCEEEEEeCC
Confidence            98   6799999999    999999988886544  23447889999999999998764

>cd08361 PpCmtC_N N-terminal domain of 2,3-dihydroxy-p-cumate-3,4-dioxygenase (PpCmtC)

Probab=99.66  E-value=1.9e-15  Score=112.28  Aligned_cols=113  Identities=17%  Similarity=0.211  Sum_probs=81.7

Q ss_pred             CCceeeeeeeCCchhhHHHHHHhcCCeeeeeccCcccceeeeeeccCCCCcceEEEEeEecCceeeccCceeeEEEEEec
Q 022831          152 EPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAISTD  231 (291)
Q Consensus       152 ~~~~hv~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~~hia~~v~  231 (291)
                      .+|.|+.|.|+|++++.+||+++|||++..+..  .    ..++..+.  .+..+.+...        .++..|++|.|+
T Consensus         5 ~~l~~v~l~v~d~~~s~~FY~~vLG~~~~~~~~--~----~~~l~~~~--~~~~i~l~~~--------~~~~~~iaf~v~   68 (124)
T cd08361           5 QDIAYVRLGTRDLAGATRFATDILGLQVAERTA--K----ATYFRSDA--RDHTLVYIEG--------DPAEQASGFELR   68 (124)
T ss_pred             EEeeEEEEeeCCHHHHHHHHHhccCceeccCCC--C----eEEEEcCC--ccEEEEEEeC--------CCceEEEEEEEC
Confidence            468999999999999999999999999765421  1    23344322  2344444321        145679999998


Q ss_pred             C---hHHHHHHHHHHHHhhCCeeeecccccC--CCCceEEEEECCCCCeEEEEechhh
Q 022831          232 D---VYKSAEVVNLVTQELGGKITRQPGPIP--GLNTKITSFVDPDGWKTVLVDNEDF  284 (291)
Q Consensus       232 d---i~~~~~~l~~~~~~~G~~~~~~p~~~~--~~~~~~~~~~DPdG~~iel~~~~~~  284 (291)
                      |   ++++++++    +++|+++..++....  ..+.+++||+|||||.||++.+...
T Consensus        69 ~~~dv~~~~~~l----~~~G~~~~~~~~~~~~~~~~~~~~~f~DPdG~~iE~~~~~~~  122 (124)
T cd08361          69 DDDALESAATEL----EQYGHEVRRGTAEECELRKVKAFIAFRDPSGNSIELVVRPSH  122 (124)
T ss_pred             CHHHHHHHHHHH----HHcCCceEEcCHHHhhcCCcceEEEEECcCCCEEEEEEeeec
Confidence            6   88888888    999999877654211  2235678999999999999986543

This subfamily contains the N-terminal, non-catalytic, domain of PpCmtC. 2,3-dihydroxy-p-cumate-3,4-dioxygenase (CmtC of Pseudomonas putida F1) is a dioxygenase involved in the eight-step catabolism pathway of p-cymene. CmtC acts upon the reaction intermediate 2,3-dihydroxy-p-cumate, yielding 2-hydroxy-3-carboxy-6-oxo-7-methylocta-2,4-dienoate. The CmtC belongs to the type I family of extradiol dioxygenases. Fe2+ was suggested as a cofactor, same as other enzymes in the family. The type I family of extradiol dioxygenases contains two structurally homologous barrel-shaped domains at the N- and C-terminal. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism.

>cd07246 Glo_EDI_BRP_like_8 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.66  E-value=1.1e-14  Score=107.58  Aligned_cols=116  Identities=22%  Similarity=0.237  Sum_probs=85.0

Q ss_pred             EEEEeCCHHHHHHHHHHhcCCEEEEEeccCCCceeeEEeeccCCCcceEEEeeecCCC--CcccCCCCceEEEEEECCHH
Q 022831           27 AVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGV--TSYDIGTGFGHLAIATEDVY  104 (291)
Q Consensus        27 v~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~--~~~~~g~~~~~i~~~v~d~~  104 (291)
                      ..|.|+|++++.+||+++|||++......+++.+....+..+.  .  .+.+......  .....+.+..+++|.|+|++
T Consensus         5 ~~l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~--~--~~~l~~~~~~~~~~~~~~~~~~~~~~~v~d~~   80 (122)
T cd07246           5 PYLIVRDAAAAIDFYKKAFGAEELERMPDDDGRVMHAELRIGD--S--VLMLADEFPEHGSPASWGGTPVSLHLYVEDVD   80 (122)
T ss_pred             EEEEECCHHHHHHHHHHhhCCEEEEEEeCCCCCEEEEEEEECC--E--EEEEecCCcccCCCCCCCCceEEEEEEeCCHH
Confidence            4588999999999999999999987655444444444454432  2  2333322111  11123346679999999999


Q ss_pred             HHHHHHHHcCCeeeeCCccCCCCceEEEEEECCCCcEEEEEec
Q 022831          105 KMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFELIQR  147 (291)
Q Consensus       105 ~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dP~G~~iel~~~  147 (291)
                      ++++++.+.|+++..++...++|.+ .++++||+|+.|+|.++
T Consensus        81 ~~~~~l~~~G~~~~~~~~~~~~g~~-~~~~~DP~G~~~~l~~~  122 (122)
T cd07246          81 ATFARAVAAGATSVMPPADQFWGDR-YGGVRDPFGHRWWIATH  122 (122)
T ss_pred             HHHHHHHHCCCeEecCcccccccce-EEEEECCCCCEEEEecC
Confidence            9999999999999888877777765 48999999999999863

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The structures of this family demonstrate domain swapping, which is shared by glyoxalase I and antibiotic resistance proteins.

>cd08346 PcpA_N_like N-terminal domain of Sphingobium chlorophenolicum 2,6-dichloro-p-hydroquinone 1,2-dioxygenase (PcpA), and similar proteins

Probab=99.65  E-value=4.6e-15  Score=110.23  Aligned_cols=120  Identities=21%  Similarity=0.256  Sum_probs=81.5

Q ss_pred             ceeeEEEEeCCHHHHHHHHHHhcCCEEEEEeccCCC-ceeeEEeeccCCCcceEEEeeecCCCCc--ccCCCCceEEEEE
Q 022831           23 RLLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEE-KYSNAFLGFGPEQSYFVVELTYNYGVTS--YDIGTGFGHLAIA   99 (291)
Q Consensus        23 ~i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~l~~~~~~~~--~~~g~~~~~i~~~   99 (291)
                      +|+||.|.|.|++++++||+++|||++..+....+. .....++..........+++........  .....+..|++|.
T Consensus         1 ~i~hv~l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~hi~f~   80 (126)
T cd08346           1 GLHHVTLITRDAQETVDFYTDVLGLRLVKKTVNQDDPGTYHLFFGDGLGSPGTLLTFFEWPDAGPKGRRGPGQIHHIAFS   80 (126)
T ss_pred             CcccEEEEcCChhHhHHHHHHccCCEEeeeEeccCCCceEEEEEecCCCCCCCEEEEEecCCCCCCCCCCCCcEEEEEEE
Confidence            579999999999999999999999998776543221 1123334322112233455554322211  1222367899999


Q ss_pred             EC---CHHHHHHHHHHcCCeeeeCCccCCCCceEEEEEECCCCcEEEEE
Q 022831          100 TE---DVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFELI  145 (291)
Q Consensus       100 v~---d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dP~G~~iel~  145 (291)
                      |+   |++++++++.++|+++...+..  ++ ...++++||+|++|||+
T Consensus        81 v~~~~~~~~~~~~~~~~g~~~~~~~~~--~~-~~~~~~~DP~G~~iE~~  126 (126)
T cd08346          81 VPSEASLDAWRERLRAAGVPVSGVVDH--FG-ERSIYFEDPDGLRLELT  126 (126)
T ss_pred             cCCHHHHHHHHHHHHHcCCcccceEee--cc-eEEEEEECCCCCEEEeC
Confidence            98   4799999999999997654332  33 34578999999999984

The N-terminal domain of Sphingobium chlorophenolicum (formerly Sphingomonas chlorophenolica) 2,6-dichloro-p-hydroquinone1,2-dioxygenase (PcpA), and similar proteins. PcpA is a key enzyme in the pentachlorophenol (PCP) degradation pathway, catalyzing the conversion of 2,6-dichloro-p-hydroquinone to 2-chloromaleylacetate. This domain belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases.

>cd07252 BphC1-RGP6_N_like N-terminal domain of 2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC, EC 1

Probab=99.65  E-value=4.2e-15  Score=109.81  Aligned_cols=113  Identities=18%  Similarity=0.229  Sum_probs=81.1

Q ss_pred             cceeeEEEEeCCHHHHHHHHHHhcCCEEEEEeccCCCceeeEEeeccCCCcceEEEeeecCCCCcccCCCCceEEEEEEC
Q 022831           22 RRLLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHLAIATE  101 (291)
Q Consensus        22 ~~i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~g~~~~~i~~~v~  101 (291)
                      ++|.||.|.|+|++++++||+++|||++..+.   ..  ...++..++  ..+.+.+....       ..+..|++|.++
T Consensus         1 ~~l~~v~l~v~Dl~~s~~FY~~~LG~~~~~~~---~~--~~~~~~~~~--~~~~~~l~~~~-------~~~~~~~~f~v~   66 (120)
T cd07252           1 KSLGYLGVESSDLDAWRRFATDVLGLQVGDRP---ED--GALYLRMDD--RAWRIAVHPGE-------ADDLAYAGWEVA   66 (120)
T ss_pred             CcccEEEEEeCCHHHHHHHHHhccCceeccCC---CC--CeEEEEccC--CceEEEEEeCC-------CCceeEEEEEEC
Confidence            47899999999999999999999999886431   11  144555432  23445443321       236779999997


Q ss_pred             C---HHHHHHHHHHcCCeeeeCCccC--CCCceEEEEEECCCCcEEEEEecC
Q 022831          102 D---VYKMVENIRAKGGNVTREPGPL--KGMTTHFAFVKDPDGYIFELIQRG  148 (291)
Q Consensus       102 d---~~~~~~~l~~~G~~~~~~~~~~--~~g~~~~~~~~dP~G~~iel~~~~  148 (291)
                      +   +++++++|.++|+++...+...  ..+...++|++||||+.||++...
T Consensus        67 ~~~dl~~~~~~l~~~Gv~~~~~~~~~~~~~~~~~~~~~~DPdG~~iE~~~~~  118 (120)
T cd07252          67 DEAALDALAARLRAAGVAVEEGSAELAAERGVEGLIRFADPDGNRHELFWGP  118 (120)
T ss_pred             CHHHHHHHHHHHHHcCCeEEEcCHHHHhhCCCcEEEEEECCCCCEEEEEecc
Confidence            4   8899999999999987644221  222234589999999999998754

13.11.39) 1 from Rhodococcus globerulus P6 (BphC1-RGP6) and similar proteins. This subfamily contains the N-terminal, non-catalytic, domain of BphC1-RGP6 and similar proteins. BphC catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). This subfamily of BphCs belongs to the type I extradiol dioxygenase family, which require a metal in the active site in its catalytic mechanism. Polychlorinated biphenyl degrading bacteria demonstrate a multiplicity of 2,3-dihydroxybiphenyl 1,2-dioxygenases. For example, three types of BphC enzymes have been found in Rhodococcus globerulus (BphC1-RGP6 - BphC3-RGP6), all three enzymes are type I extradiol dioxygenases. BphC1-RGP6 has an internal duplication, it is a two-domain dioxygenase which forms octamers, and has Fe(II) at the catalytic site. Its N-

>cd07258 PpCmtC_C C-terminal domain of 2,3-dihydroxy-p-cumate-3,4-dioxygenase (PpCmtC)

Probab=99.65  E-value=5.1e-15  Score=112.22  Aligned_cols=113  Identities=19%  Similarity=0.227  Sum_probs=82.8

Q ss_pred             eeEEEEeCCHHHHHHHHHHhcCCEEEEEeccCCCceeeEEeeccCCCcceEEEeeecCCCCcccCCCCceEEEEEECCH-
Q 022831           25 LHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHLAIATEDV-  103 (291)
Q Consensus        25 ~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~g~~~~~i~~~v~d~-  103 (291)
                      .||.|.|+|++++.+||+++|||++..+...     ..+|+..........+.+...       ...++.|++|.|+|+ 
T Consensus         1 ~Hv~l~V~Dle~s~~Fy~~vLG~~~~~~~~~-----~~~~l~~~~~~~~h~~~~~~~-------~~~gl~Hiaf~v~~~~   68 (141)
T cd07258           1 GHVVIGSENFEASRDSLVEDFGFRVSDLIED-----RIVFMRCHPNPFHHTFAVGPA-------SSSHFHHVNFMVTDID   68 (141)
T ss_pred             CcEEEecCCHHHHHHHHHhcCCCEeeeeeCC-----EEEEEEcCCCCCcceeeeccC-------CCCceEEEEEECCCHH
Confidence            4999999999999999999999998765321     255665432222233322211       234899999999864 


Q ss_pred             --HHHHHHHHHcCCeeeeCCccCCCCceEEEEEECCCCcEEEEEecCC
Q 022831          104 --YKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFELIQRGP  149 (291)
Q Consensus       104 --~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dP~G~~iel~~~~~  149 (291)
                        ++++++|.++|+++...|...+.+...++|++||+|+.||+.....
T Consensus        69 ~v~~~~~~l~~~G~~~~~~p~~~~~~~~~~~y~~DPdG~~iE~~~~~~  116 (141)
T cd07258          69 DIGKALYRIKAHDVKVVFGPGRHPPSDSIFFYFLDPDGITVEYSFGME  116 (141)
T ss_pred             HHHHHHHHHHHCCCcEEeCCceECCCCCEEEEEECCCCCEEEEEeCcc
Confidence              5679999999999877776655444556899999999999987654

This subfamily contains the C-terminal, catalytic, domain of PpCmtC. 2,3-dihydroxy-p-cumate-3,4-dioxygenase (CmtC of Pseudomonas putida F1) is a dioxygenase involved in the eight-step catabolism pathway of p-cymene. CmtC acts upon the reaction intermediate 2,3-dihydroxy-p-cumate, yielding 2-hydroxy-3-carboxy-6-oxo-7-methylocta-2,4-dienoate. The CmtC belongs to the type I family of extradiol dioxygenases. Fe2+ was suggested as a cofactor, same as for other enzymes in the family. The type I family of extradiol dioxygenases contains two structurally homologous barrel-shaped domains at the N- and C-terminal. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism.

>cd09013 BphC-JF8_N_like N-terminal, non-catalytic, domain of BphC_JF8, (2,3-dihydroxybiphenyl 1,2-dioxygenase) from Bacillus sp

Probab=99.65  E-value=2.6e-15  Score=111.10  Aligned_cols=113  Identities=19%  Similarity=0.203  Sum_probs=79.5

Q ss_pred             CCceeeeeeeCCchhhHHHHHHhcCCeeeeeccCcccceeeeeeccCCCCcceEEEEeEecCceeeccCceeeEEEEEec
Q 022831          152 EPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAISTD  231 (291)
Q Consensus       152 ~~~~hv~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~~hia~~v~  231 (291)
                      .+|.|+.|.|+|++++.+||+++|||++..+.+  .    ..++...+......+.+...       ..+++.|++|.|+
T Consensus         5 ~~i~hv~l~v~dl~~a~~FY~~~lG~~~~~~~~--~----~~~l~~~~~~~~~~~~l~~~-------~~~~~~h~af~v~   71 (121)
T cd09013           5 AHLAHVELLTPKPEESLWFFTDVLGLEETGREG--Q----SVYLRAWGDYEHHSLKLTES-------PEAGLGHIAWRAS   71 (121)
T ss_pred             cEeeEEEEEeCCHHHHHHHHHhCcCCEEEeecC--C----eEEEEeccCCCccEEEEeeC-------CCCceEEEEEEcC
Confidence            568999999999999999999999999876532  1    22333212112344444321       2458899999997


Q ss_pred             ---ChHHHHHHHHHHHHhhCCeeeecccccCCCCceEEEEECCCCCeEEEEechh
Q 022831          232 ---DVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNED  283 (291)
Q Consensus       232 ---di~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~~  283 (291)
                         +++++.+++    ++.|+++...+... + .+..+||+|||||.||++...+
T Consensus        72 ~~~~v~~~~~~l----~~~G~~~~~~~~~~-~-~~~~~~~~DPdG~~iEl~~~~~  120 (121)
T cd09013          72 SPEALERRVAAL----EASGLGIGWIEGDP-G-HGKAYRFRSPDGHPMELYWEVE  120 (121)
T ss_pred             CHHHHHHHHHHH----HHcCCccccccCCC-C-CcceEEEECCCCCEEEEEEecc
Confidence               467777777    99999875433322 2 2457899999999999997543

JF8 and similar proteins. 2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC) catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, a key step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). BphC belongs to the type I extradiol dioxygenase family, which requires a metal ion in the active site in its catalytic mechanism. Polychlorinated biphenyl degrading bacteria demonstrate a multiplicity of BphCs. This subfamily of BphC is represented by the enzyme purified from the thermophilic biphenyl and naphthalene degrader, Bacillus sp. JF8. The members in this family of BphC enzymes may use either Mn(II) or Fe(II) as cofactors. The enzyme purified from Bacillus sp. JF8 is Mn(II)-dependent, however, the enzyme from Rhodococcus jostii RHAI has Fe(II) bound to it. BphC_JF8 is thermostable and its optimum activity is at 85 degrees C

>cd07242 Glo_EDI_BRP_like_6 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.65  E-value=1.3e-14  Score=108.35  Aligned_cols=116  Identities=22%  Similarity=0.340  Sum_probs=82.8

Q ss_pred             ceeeEEEEeCCHHHHHHHHHHhc---CCEEEEEeccCCCceeeEEeeccCCCcceEEEeeecCCCCc---ccCCCCceEE
Q 022831           23 RLLHAVYRVGDLDRTIKYYTECF---GMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTS---YDIGTGFGHL   96 (291)
Q Consensus        23 ~i~hv~l~v~d~~~~~~FY~~~l---G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~---~~~g~~~~~i   96 (291)
                      +|+||.|.|+|++++.+||+++|   ||++.....  .+   ..|...   .....+.+........   ...+.++.|+
T Consensus         1 ~i~Hv~i~v~d~~~~~~Fy~~~l~~~G~~~~~~~~--~~---~~~~~~---~~~~~i~l~~~~~~~~~~~~~~~~g~~hi   72 (128)
T cd07242           1 GIHHVELTVRDLERSRAFYDWLLGLLGFEEVKEWE--DG---RSWRAG---DGGTYLVLQQADGESAGRHDRRNPGLHHL   72 (128)
T ss_pred             CCceEEEEeCCHHHHHHHHHHHHhhcCCEEEEeec--cC---ceEEec---CCceEEEEEecccCCCcccccCCcCeeEE
Confidence            58999999999999999999999   999876542  11   233322   1224455554332221   1234578899


Q ss_pred             EEEECC---HHHHHHHHHHcCCeeeeCCccC--CCCceEEEEEECCCCcEEEEEe
Q 022831           97 AIATED---VYKMVENIRAKGGNVTREPGPL--KGMTTHFAFVKDPDGYIFELIQ  146 (291)
Q Consensus        97 ~~~v~d---~~~~~~~l~~~G~~~~~~~~~~--~~g~~~~~~~~dP~G~~iel~~  146 (291)
                      +|.|+|   +++++++|.++|+++...+...  ..+....+|++||+|++|||+.
T Consensus        73 a~~v~~~~d~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~DpdG~~ie~~~  127 (128)
T cd07242          73 AFRAPSREAVDELYARLAKRGAEILYAPREPYAGGPGYYALFFEDPDGIRLELVA  127 (128)
T ss_pred             EEEcCCHHHHHHHHHHHHHcCCeEecCCcccccCCCcEEEEEEECCCCcEEEEEe
Confidence            999974   8899999999999988776542  1223445889999999999985

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>cd07253 Glo_EDI_BRP_like_2 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.65  E-value=3.9e-15  Score=110.36  Aligned_cols=117  Identities=22%  Similarity=0.327  Sum_probs=83.8

Q ss_pred             CCceeeeeeeCCchhhHHHHHHhcCCeeeeeccCcccceeeeeeccCCCCcceEEEEeEecCc---eeeccCceeeEEEE
Q 022831          152 EPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGV---TEYTKGNAYAQVAI  228 (291)
Q Consensus       152 ~~~~hv~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~---~~~~~~~g~~hia~  228 (291)
                      .++.|+.|.|+|++++++||+++||++.....+..  .+..  +..++    ..+++......   .....+++..|++|
T Consensus         2 ~~l~hi~l~v~d~~~s~~Fy~~~lG~~~~~~~~~~--~~~~--~~~~~----~~~~l~~~~~~~~~~~~~~~~~~~hi~~   73 (125)
T cd07253           2 KRIDHVVLTVADIEATLDFYTRVLGMEVVRFGEEV--GRKA--LRFGS----QKINLHPVGGEFEPAAGSPGPGSDDLCL   73 (125)
T ss_pred             cccceEEEEecCHHHHHHHHHHHhCceeecccccC--CceE--EEeCC----EEEEEecCCCccCcCccCCCCCCceEEE
Confidence            35899999999999999999999999987653221  1222  22221    34454332211   11123468899999


Q ss_pred             EecC-hHHHHHHHHHHHHhhCCeeeecccccCC--CCceEEEEECCCCCeEEEEe
Q 022831          229 STDD-VYKSAEVVNLVTQELGGKITRQPGPIPG--LNTKITSFVDPDGWKTVLVD  280 (291)
Q Consensus       229 ~v~d-i~~~~~~l~~~~~~~G~~~~~~p~~~~~--~~~~~~~~~DPdG~~iel~~  280 (291)
                      .+++ ++++++++    +++|+++..+|...++  ..++.+||+|||||+||+++
T Consensus        74 ~~~~~~~~~~~~l----~~~G~~~~~~~~~~~~~~~~~~~~~~~DPdG~~ve~~~  124 (125)
T cd07253          74 ITEPPIDELVAHL----EAHGVPIEEGPVPRTGARGPITSVYFRDPDGNLIELSN  124 (125)
T ss_pred             EecccHHHHHHHH----HHCCceeecCcccccCCCCCccEEEEECCCCCEEEeee
Confidence            9975 99999999    9999999887765432  23578999999999999986

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>cd07267 THT_Oxygenase_N N-terminal domain of 2,4,5-trihydroxytoluene (THT) oxygenase

Probab=99.65  E-value=1e-14  Score=106.49  Aligned_cols=110  Identities=20%  Similarity=0.287  Sum_probs=79.5

Q ss_pred             ccceeeEEEEeCCHHHHHHHHHHhcCCEEEEEeccCCCceeeEEeeccCCCcceEEEeeecCCCCcccCCCCceEEEEEE
Q 022831           21 KRRLLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHLAIAT  100 (291)
Q Consensus        21 ~~~i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~g~~~~~i~~~v  100 (291)
                      |++|+|+.|.|+|++++++||++ |||++..+..   +   ..++..+. .....+.+...       ..+++.|++|.|
T Consensus         1 ~~~l~hv~l~v~Dl~~s~~FY~~-lGl~~~~~~~---~---~~~~~~~~-~~~~~~~~~~~-------~~~~~~~~af~v   65 (113)
T cd07267           1 LTDIAHVRFEHPDLDKAERFLTD-FGLEVAARTD---D---ELYYRGYG-TDPFVYVARKG-------EKARFVGAAFEA   65 (113)
T ss_pred             CcEEEEEEEccCCHHHHHHHHHH-cCCEEEEecC---C---eEEEecCC-CccEEEEcccC-------CcCcccEEEEEE
Confidence            57899999999999999999999 9999865421   1   34554322 22222222111       124678999999


Q ss_pred             CCHHHHHHHHHHcCCeeeeCCccCCCCceEEEEEECCCCcEEEEEec
Q 022831          101 EDVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFELIQR  147 (291)
Q Consensus       101 ~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dP~G~~iel~~~  147 (291)
                      +|.+++.+.+++.|.+....+. .+++.. +++|+||+|+.|||+..
T Consensus        66 ~~~~~~~~~~~~~g~~~~~~~~-~~~~~~-~~~~~DPdG~~iEl~~~  110 (113)
T cd07267          66 ASRADLEKAAALPGASVIDDLE-APGGGK-RVTLTDPDGFPVELVYG  110 (113)
T ss_pred             CCHHHHHHHHHcCCCeeecCCC-CCCCce-EEEEECCCCCEEEEEec
Confidence            9999999999999998765432 344434 58999999999999865

This subfamily contains the N-terminal, non-catalytic, domain of THT oxygenase. THT oxygenase is an extradiol dioxygenase in the 2,4-dinitrotoluene (DNT) degradation pathway. It catalyzes the conversion of 2,4,5-trihydroxytoluene to an unstable ring fission product, 2,4-dihydroxy-5-methyl-6-oxo-2,4-hexadienoic acid. The native protein was determined to be a dimer by gel filtration. The enzyme belongs to the type I family of extradiol dioxygenases which contains two structurally homologous barrel-shaped domains at the N- and C-terminus of each monomer. The active-site metal is located in the C-terminal barrel. Fe(II) is required for its catalytic activity.

>cd07245 Glo_EDI_BRP_like_9 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.65  E-value=3.5e-15  Score=108.52  Aligned_cols=113  Identities=26%  Similarity=0.318  Sum_probs=80.8

Q ss_pred             eeeEEEEeCCHHHHHHHHHHhcCCEEEEEeccCCCceeeEEeeccCCCcceEEEeeecCCCCc-ccCCCCceEEEEEECC
Q 022831           24 LLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTS-YDIGTGFGHLAIATED  102 (291)
Q Consensus        24 i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~-~~~g~~~~~i~~~v~d  102 (291)
                      |+|++|.|+|++++++||+++|||++..+...+   ....++..++.   ..+.+........ ...+.+..|++|.|+|
T Consensus         1 i~Hi~l~v~d~~~~~~FY~~~lG~~~~~~~~~~---~~~~~~~~~~~---~~i~l~~~~~~~~~~~~~~~~~~~~~~v~d   74 (114)
T cd07245           1 LDHVALRVPDLEASRAFYTDVLGLEEGPRPPFL---FPGAWLYAGDG---PQLHLIEEDPPDALPEGPGRDDHIAFRVDD   74 (114)
T ss_pred             CCeEEEecCCHHHHHHHHHHccCCcccCcCCCC---CCceEEEeCCC---cEEEEEecCCCccccCCCcccceEEEEeCC
Confidence            689999999999999999999999986543221   12455554332   2344443322211 1233467899999999


Q ss_pred             HHHHHHHHHHcCCeeeeCCccCCCCceEEEEEECCCCcEEEE
Q 022831          103 VYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFEL  144 (291)
Q Consensus       103 ~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dP~G~~iel  144 (291)
                      ++++++++.++|+++..++.. .++.+ .+++.||+|+.|||
T Consensus        75 ~~~~~~~l~~~g~~~~~~~~~-~~~~~-~~~~~DP~G~~iE~  114 (114)
T cd07245          75 LDAFRARLKAAGVPYTESDVP-GDGVR-QLFVRDPDGNRIEL  114 (114)
T ss_pred             HHHHHHHHHHcCCCcccccCC-CCCcc-EEEEECCCCCEEeC
Confidence            999999999999998877654 33334 47899999999985

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases.

>cd07266 HPCD_N_class_II N-terminal domain of 3,4-dihydroxyphenylacetate 2,3-dioxygenase (HPCD); belongs to the type I class II family of extradiol dioxygenases

Probab=99.65  E-value=3e-15  Score=110.65  Aligned_cols=114  Identities=25%  Similarity=0.208  Sum_probs=80.8

Q ss_pred             CCceeeeeeeCCchhhHHHHHHhcCCeeeeeccCcccceeeeeeccCCCCcceEEEEeEecCceeeccCceeeEEEEEec
Q 022831          152 EPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAISTD  231 (291)
Q Consensus       152 ~~~~hv~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~~hia~~v~  231 (291)
                      .++.|+.|.|+|++++++||+++|||++....+  +    ..++..........+.+...       ..++..|++|.|.
T Consensus         3 ~~i~hi~l~v~d~~~~~~Fy~~~lG~~~~~~~~--~----~~~~~~~~~~~~~~~~~~~~-------~~~~~~hi~~~v~   69 (121)
T cd07266           3 LRLGHVELRVTDLEKSREFYVDVLGLVETEEDD--D----RIYLRGLEEFIHHSLVLTKA-------PVAGLGHIAFRVR   69 (121)
T ss_pred             ceeeEEEEEcCCHHHHHHHHHhccCCEEeccCC--C----eEEEEecCCCceEEEEEeeC-------CCCceeEEEEECC
Confidence            468999999999999999999999999865421  1    12222111112233444221       1357899999994


Q ss_pred             ---ChHHHHHHHHHHHHhhCCeeeecccccCCCCceEEEEECCCCCeEEEEech
Q 022831          232 ---DVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNE  282 (291)
Q Consensus       232 ---di~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~  282 (291)
                         |++++++++    +++|+++...|.....+..+.+|+.|||||+||++..-
T Consensus        70 ~~~dv~~~~~~l----~~~g~~~~~~~~~~~~~~~~~~~~~DPdG~~ve~~~~~  119 (121)
T cd07266          70 SEEDLDKAEAFF----QELGLPTEWVEAGEEPGQGRALRVEDPLGFPIEFYAEM  119 (121)
T ss_pred             CHHHHHHHHHHH----HHcCCCcccccCCcCCCCccEEEEECCCCCEEEEEecc
Confidence               688888888    99999987765443333357899999999999998753

This subfamily contains the N-terminal, non-catalytic, domain of HPCD. HPCD catalyses the second step in the degradation of 4-hydroxyphenylacetate to succinate and pyruvate. The aromatic ring of 4-hydroxyphenylacetate is opened by this dioxygenase to yield the 3,4-diol product, 2-hydroxy-5-carboxymethylmuconate semialdehyde. HPCD is a homotetramer and each monomer contains two structurally homologous barrel-shaped domains at the N- and C-terminus. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism. Most extradiol dioxygenases contain Fe(II) in their active site, but HPCD can be activated by either Mn(II) or Fe(II). These enzymes belong to the type I class II family of extradiol dioxygenases. The class III 3,4-dihydroxyphenylacetate 2,3-dioxygenases belong to a differ

>cd09011 Glo_EDI_BRP_like_23 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.64  E-value=2.6e-15  Score=110.92  Aligned_cols=113  Identities=19%  Similarity=0.288  Sum_probs=79.1

Q ss_pred             CceeeeeeeCCchhhHHHHHHhcCCeeeeeccCcccceeeeeeccCCCCcceEEEEeE----ecCceeeccCceeeEEEE
Q 022831          153 PLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAY----SYGVTEYTKGNAYAQVAI  228 (291)
Q Consensus       153 ~~~hv~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~----~~~~~~~~~~~g~~hia~  228 (291)
                      ++.++.|.|+|++++.+||+++||+++....+  .  + ..+ ..+     ..+.+..    .....+...+.+..|++|
T Consensus         2 ~~~~~~l~v~D~~~a~~FY~~~lG~~~~~~~~--~--~-~~~-~~~-----~~l~~~~~~~~~~~~~~~~~~~~~~~l~~   70 (120)
T cd09011           2 KFKNPLLVVKDIEKSKKFYEKVLGLKVVMDFG--E--N-VTF-EGG-----FALQEGYSWLEGISKADIIEKSNNFELYF   70 (120)
T ss_pred             EEEEEEEEECCHHHHHHHHHHhcCCEEeeccC--c--e-EEE-ecc-----ceeccchhhhccCCcccccccCCceEEEE
Confidence            46789999999999999999999999764321  1  1 111 100     1111100    000111122345579999


Q ss_pred             EecChHHHHHHHHHHHHhhCC-eeeecccccCCCCceEEEEECCCCCeEEEEec
Q 022831          229 STDDVYKSAEVVNLVTQELGG-KITRQPGPIPGLNTKITSFVDPDGWKTVLVDN  281 (291)
Q Consensus       229 ~v~di~~~~~~l~~~~~~~G~-~~~~~p~~~~~~~~~~~~~~DPdG~~iel~~~  281 (291)
                      .|+|++++++++    +++|+ ++..+|...++ +.+.++|+|||||+|||.++
T Consensus        71 ~v~dvd~~~~~l----~~~g~~~~~~~~~~~~~-g~r~~~~~DPdGn~iei~~~  119 (120)
T cd09011          71 EEEDFDAFLDKL----KRYDNIEYVHPIKEHPW-GQRVVRFYDPDKHIIEVGES  119 (120)
T ss_pred             EehhhHHHHHHH----HhcCCcEEecCcccCCC-ccEEEEEECCCCCEEEEecc
Confidence            999999999999    99986 78888877775 56899999999999999874

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd08346 PcpA_N_like N-terminal domain of Sphingobium chlorophenolicum 2,6-dichloro-p-hydroquinone 1,2-dioxygenase (PcpA), and similar proteins

Probab=99.64  E-value=3.7e-15  Score=110.75  Aligned_cols=120  Identities=18%  Similarity=0.224  Sum_probs=81.8

Q ss_pred             CceeeeeeeCCchhhHHHHHHhcCCeeeeeccCccc-ceeeeeeccCCCCcceEEEEeEecCcee--eccCceeeEEEEE
Q 022831          153 PLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPEL-KCALAMLGYAEEDQTTVLELAYSYGVTE--YTKGNAYAQVAIS  229 (291)
Q Consensus       153 ~~~hv~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~l~~~~~~~~--~~~~~g~~hia~~  229 (291)
                      .|+|+.|.|.|++++++||+++|||+........+. ....+++..........++|........  .....++.|++|.
T Consensus         1 ~i~hv~l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~hi~f~   80 (126)
T cd08346           1 GLHHVTLITRDAQETVDFYTDVLGLRLVKKTVNQDDPGTYHLFFGDGLGSPGTLLTFFEWPDAGPKGRRGPGQIHHIAFS   80 (126)
T ss_pred             CcccEEEEcCChhHhHHHHHHccCCEEeeeEeccCCCceEEEEEecCCCCCCCEEEEEecCCCCCCCCCCCCcEEEEEEE
Confidence            378999999999999999999999998766433221 1122333322112234566654332211  1123467899999


Q ss_pred             ecC---hHHHHHHHHHHHHhhCCeeeecccccCCCCceEEEEECCCCCeEEEE
Q 022831          230 TDD---VYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLV  279 (291)
Q Consensus       230 v~d---i~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iel~  279 (291)
                      |+|   ++++++++    +++|+++..++..   .+.+.+||+||+||+|||+
T Consensus        81 v~~~~~~~~~~~~~----~~~g~~~~~~~~~---~~~~~~~~~DP~G~~iE~~  126 (126)
T cd08346          81 VPSEASLDAWRERL----RAAGVPVSGVVDH---FGERSIYFEDPDGLRLELT  126 (126)
T ss_pred             cCCHHHHHHHHHHH----HHcCCcccceEee---cceEEEEEECCCCCEEEeC
Confidence            984   68888888    9999998764433   2467899999999999985

The N-terminal domain of Sphingobium chlorophenolicum (formerly Sphingomonas chlorophenolica) 2,6-dichloro-p-hydroquinone1,2-dioxygenase (PcpA), and similar proteins. PcpA is a key enzyme in the pentachlorophenol (PCP) degradation pathway, catalyzing the conversion of 2,6-dichloro-p-hydroquinone to 2-chloromaleylacetate. This domain belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases.

>cd07242 Glo_EDI_BRP_like_6 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.64  E-value=8.3e-15  Score=109.39  Aligned_cols=117  Identities=25%  Similarity=0.277  Sum_probs=84.3

Q ss_pred             CceeeeeeeCCchhhHHHHHHhc---CCeeeeeccCcccceeeeeeccCCCCcceEEEEeEecCcee---eccCceeeEE
Q 022831          153 PLCQVMLRVGDLGRSIKFYEKAL---GMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTE---YTKGNAYAQV  226 (291)
Q Consensus       153 ~~~hv~l~v~D~~~~~~Fy~~~l---G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~---~~~~~g~~hi  226 (291)
                      +|+|+.+.|+|++++.+||+++|   ||++....+. .   . .+...   ..+..+.+........   ...++++.|+
T Consensus         1 ~i~Hv~i~v~d~~~~~~Fy~~~l~~~G~~~~~~~~~-~---~-~~~~~---~~~~~i~l~~~~~~~~~~~~~~~~g~~hi   72 (128)
T cd07242           1 GIHHVELTVRDLERSRAFYDWLLGLLGFEEVKEWED-G---R-SWRAG---DGGTYLVLQQADGESAGRHDRRNPGLHHL   72 (128)
T ss_pred             CCceEEEEeCCHHHHHHHHHHHHhhcCCEEEEeecc-C---c-eEEec---CCceEEEEEecccCCCcccccCCcCeeEE
Confidence            47899999999999999999999   9998765421 1   1 11211   1235566655333211   1234578999


Q ss_pred             EEEecC---hHHHHHHHHHHHHhhCCeeeeccccc--CCCCceEEEEECCCCCeEEEEec
Q 022831          227 AISTDD---VYKSAEVVNLVTQELGGKITRQPGPI--PGLNTKITSFVDPDGWKTVLVDN  281 (291)
Q Consensus       227 a~~v~d---i~~~~~~l~~~~~~~G~~~~~~p~~~--~~~~~~~~~~~DPdG~~iel~~~  281 (291)
                      +|.|+|   ++++++++    +++|+.+...+...  ...+.+.+|++|||||+|||+.+
T Consensus        73 a~~v~~~~d~~~~~~~l----~~~g~~~~~~~~~~~~~~~~~~~~~~~DpdG~~ie~~~~  128 (128)
T cd07242          73 AFRAPSREAVDELYARL----AKRGAEILYAPREPYAGGPGYYALFFEDPDGIRLELVAP  128 (128)
T ss_pred             EEEcCCHHHHHHHHHHH----HHcCCeEecCCcccccCCCcEEEEEEECCCCcEEEEEeC
Confidence            999974   77888888    99999998877652  22356789999999999999864

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>COG3185 4-hydroxyphenylpyruvate dioxygenase and related hemolysins [Amino acid transport and metabolism / General function prediction only]

Probab=99.64  E-value=1.8e-14  Score=119.53  Aligned_cols=227  Identities=18%  Similarity=0.232  Sum_probs=144.5

Q ss_pred             cCCcCCccceeeEEEEeCCH-HHHHHHHHHhcCCEEEEEeccCCCceeeEEeeccCCCcceEEEeeecCCCCcc--cCCC
Q 022831           15 EWPKKDKRRLLHAVYRVGDL-DRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTSY--DIGT   91 (291)
Q Consensus        15 ~~~~~~~~~i~hv~l~v~d~-~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~--~~g~   91 (291)
                      ++| +...++++|.+.|.|. ++...++. .|||+...+.-...    ...++  .++..++|.-........+  .+|+
T Consensus        15 ~~P-~~~~GfeFvEf~~~d~~~~l~~l~~-~lGF~~~~~Hrsk~----v~l~r--QGdinlvvn~~~~s~a~~f~~~Hgp   86 (363)
T COG3185          15 ANP-EGTDGFEFVEFAVPDPQEALGALLG-QLGFTAVAKHRSKA----VTLYR--QGDINLVVNAEPDSFAAEFLDKHGP   86 (363)
T ss_pred             cCC-CCCCceeEEEEecCCHHHHHHHHHH-HhCccccccccccc----eeEEE--eCCEEEEEcCCCcchhhHHHHhcCC
Confidence            444 3489999999999999 55555555 59999876432221    22233  2244443321111111122  4888


Q ss_pred             CceEEEEEECCHHHHHHHHHHcCCeeeeC-Cc--cC--C---CCceEEEEEECCCC-cEE---EEEec---C-CC---CC
Q 022831           92 GFGHLAIATEDVYKMVENIRAKGGNVTRE-PG--PL--K---GMTTHFAFVKDPDG-YIF---ELIQR---G-PT---PE  152 (291)
Q Consensus        92 ~~~~i~~~v~d~~~~~~~l~~~G~~~~~~-~~--~~--~---~g~~~~~~~~dP~G-~~i---el~~~---~-~~---~~  152 (291)
                      +.+.++|.|+|...++++.++.|++.... ..  +.  +   +-.+..+|+.|..| ..+   ++...   . ..   ..
T Consensus        87 s~~a~a~~V~DA~~A~a~A~a~gA~~~~~~~g~~e~~ipai~giggsllyfvd~~~~~siyd~~f~~~~~~~~~~~~g~~  166 (363)
T COG3185          87 SACAMAFRVDDAEQALARALALGARTIDTEIGAGEVDIPAIRGIGGSLLYFVDRYGGRSIYDVEFEPNGAQGASGGVGLT  166 (363)
T ss_pred             chheeEEeeCCHHHHHHHHHHcCCccccCCCCCccccccceeccCCcEEEEeccCCCCcccccccccccccccccccCce
Confidence            99999999999999999999999954322 21  11  1   11123567766663 111   11111   0 11   13


Q ss_pred             CceeeeeeeC--CchhhHHHHHHhcCCeeeeeccCccc--ce-eeeeeccCCCCcceEEEEeEecCcee-------eccC
Q 022831          153 PLCQVMLRVG--DLGRSIKFYEKALGMKLLRTIDSPEL--KC-ALAMLGYAEEDQTTVLELAYSYGVTE-------YTKG  220 (291)
Q Consensus       153 ~~~hv~l~v~--D~~~~~~Fy~~~lG~~~~~~~~~~~~--~~-~~~~~~~~~~~~~~~l~l~~~~~~~~-------~~~~  220 (291)
                      .|+|++++|.  .++.+..||+++|||+.....+.++.  .. .-.+.+   .+....|.|..+.+..+       ...|
T Consensus       167 ~IDHl~~nv~~~~md~w~~FY~~if~~~~~~~fdi~~p~tgl~Sram~S---p~G~vrlplN~s~~~~sqi~efl~~y~G  243 (363)
T COG3185         167 AIDHLTHNVKAGQMDTWVLFYESLFGFREIQYFDIPGPITGLRSRAMVS---PCGKVRLPLNESADDKSQIGEFLREYRG  243 (363)
T ss_pred             eechhhhhcchhhHHHHHHHHHHHhCccceeeEeccCCcccEEEeeEec---CCCcEEeecccCCCchhHHHHHHHHhCC
Confidence            6999998886  79999999999999998887654432  12 222222   22345566655444432       2247


Q ss_pred             ceeeEEEEEecChHHHHHHHHHHHHhhCCeeeeccc
Q 022831          221 NAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPG  256 (291)
Q Consensus       221 ~g~~hia~~v~di~~~~~~l~~~~~~~G~~~~~~p~  256 (291)
                      .|++||||.++||.++.+++    ++.|+++...|.
T Consensus       244 ~GIQHIA~~T~dI~~tv~~l----r~rG~~fl~ip~  275 (363)
T COG3185         244 EGIQHIAFGTDDIYATVAAL----RERGVKFLPIPE  275 (363)
T ss_pred             CcceEEEecccHHHHHHHHH----HHcCCccCCCch
Confidence            79999999999999999999    999999988774

>cd07264 Glo_EDI_BRP_like_15 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.64  E-value=3.7e-15  Score=110.78  Aligned_cols=115  Identities=21%  Similarity=0.264  Sum_probs=79.6

Q ss_pred             ceeeeeeeCCchhhHHHHHHhcCCeeeeeccCcccceeeeeeccCCCCcceEEEEeEec--------C--ceeeccCcee
Q 022831          154 LCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSY--------G--VTEYTKGNAY  223 (291)
Q Consensus       154 ~~hv~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~--------~--~~~~~~~~g~  223 (291)
                      +.|+.|.|+|++++.+||+++|||+......  +..+...  ..+    ...+.+....        .  .......++.
T Consensus         1 ~~~~~l~v~D~~~s~~FY~~~lG~~~~~~~~--~~~~~~~--~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   72 (125)
T cd07264           1 FGYTIIYVEDVEKTLEFYERAFGFERRFLHE--SGDYGEL--ETG----ETTLAFASHDLAESNLKGGFVKADPAQPPAG   72 (125)
T ss_pred             CceEEEEEcCHHHHHHHHHHhhCCeEEeecC--CCcEEEe--cCC----cEEEEEEcccccccccccCccCCccccCCCc
Confidence            4689999999999999999999999764322  1112111  111    1122111100        0  0001112344


Q ss_pred             eEEEEEecChHHHHHHHHHHHHhhCCeeeecccccCCCCceEEEEECCCCCeEEEEec
Q 022831          224 AQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDN  281 (291)
Q Consensus       224 ~hia~~v~di~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iel~~~  281 (291)
                      .|++|.|+|++++++++    +++|+++..+|...++ +.+.++++|||||+|||+++
T Consensus        73 ~~~~~~v~di~~~~~~l----~~~G~~~~~~~~~~~~-g~~~~~~~DPdG~~~~~~~~  125 (125)
T cd07264          73 FEIAFVTDDVAAAFARA----VEAGAVLVSEPKEKPW-GQTVAYVRDINGFLIELCSP  125 (125)
T ss_pred             EEEEEEcCCHHHHHHHH----HHcCCEeccCCccCCC-CcEEEEEECCCCCEEEEecC
Confidence            68999999999999999    9999999888877765 56788999999999999875

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd08359 Glo_EDI_BRP_like_22 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.64  E-value=1.3e-14  Score=106.89  Aligned_cols=111  Identities=20%  Similarity=0.174  Sum_probs=79.6

Q ss_pred             eEEEEeCCHHHHHHHHHHhcCCEEEEEeccCCCceeeEEeeccCCCcceEEEeeecCCCC-----cccCCCCceEEEEEE
Q 022831           26 HAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVT-----SYDIGTGFGHLAIAT  100 (291)
Q Consensus        26 hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~-----~~~~g~~~~~i~~~v  100 (291)
                      +..|.|+|++++.+||+++|||++.....    .  ..++..+.  ..+.+.+.......     ....+ ...|++|.|
T Consensus         4 ~~~l~v~D~~~s~~FY~~~lG~~~~~~~~----~--~~~~~~~~--~~~~l~l~~~~~~~~~~~~~~~~~-~~~~~~~~v   74 (119)
T cd08359           4 YPVIVTDDLAETADFYVRHFGFTVVFDSD----W--YVSLRSPD--GGVELAFMLPGHETVPAAQYQFQG-QGLILNFEV   74 (119)
T ss_pred             eeEEEECCHHHHHHHHHHhhCcEEEeccC----c--EEEEecCC--CceEEEEccCCCCCCcchhcccCC-ceEEEEEEE
Confidence            67899999999999999999999876421    1  33343222  22444443321111     11122 234899999


Q ss_pred             CCHHHHHHHHHHcCCeeeeCCccCCCCceEEEEEECCCCcEEEEEe
Q 022831          101 EDVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFELIQ  146 (291)
Q Consensus       101 ~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dP~G~~iel~~  146 (291)
                      +|++++++++.++|+++..++...++|.+ .++++||+|+.|+|+|
T Consensus        75 ~did~~~~~l~~~G~~~~~~~~~~~~g~~-~~~~~DP~G~~ie~~~  119 (119)
T cd08359          75 DDVDAEYERLKAEGLPIVLPLRDEPWGQR-HFIVRDPNGVLIDIVQ  119 (119)
T ss_pred             CCHHHHHHHHHhcCCCeeeccccCCCcce-EEEEECCCCCEEEEEC
Confidence            99999999999999998877777777655 4789999999999985

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The structures of this family demonstrate domain swapping, which is shared by glyoxalase I and antibiotic resistance proteins.

>cd07252 BphC1-RGP6_N_like N-terminal domain of 2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC, EC 1

Probab=99.63  E-value=5.7e-15  Score=109.07  Aligned_cols=112  Identities=15%  Similarity=0.183  Sum_probs=80.4

Q ss_pred             CceeeeeeeCCchhhHHHHHHhcCCeeeeeccCcccceeeeeeccCCCCcceEEEEeEecCceeeccCceeeEEEEEecC
Q 022831          153 PLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAISTDD  232 (291)
Q Consensus       153 ~~~hv~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~~hia~~v~d  232 (291)
                      ++.|+.|.|+|++++.+||+++|||++..+..  .   ...++..++  .+..+.+...       ..++..|++|.+++
T Consensus         2 ~l~~v~l~v~Dl~~s~~FY~~~LG~~~~~~~~--~---~~~~~~~~~--~~~~~~l~~~-------~~~~~~~~~f~v~~   67 (120)
T cd07252           2 SLGYLGVESSDLDAWRRFATDVLGLQVGDRPE--D---GALYLRMDD--RAWRIAVHPG-------EADDLAYAGWEVAD   67 (120)
T ss_pred             cccEEEEEeCCHHHHHHHHHhccCceeccCCC--C---CeEEEEccC--CceEEEEEeC-------CCCceeEEEEEECC
Confidence            58999999999999999999999999765421  1   123333222  2345555331       13477899999975


Q ss_pred             ---hHHHHHHHHHHHHhhCCeeeeccccc--CCCCceEEEEECCCCCeEEEEech
Q 022831          233 ---VYKSAEVVNLVTQELGGKITRQPGPI--PGLNTKITSFVDPDGWKTVLVDNE  282 (291)
Q Consensus       233 ---i~~~~~~l~~~~~~~G~~~~~~p~~~--~~~~~~~~~~~DPdG~~iel~~~~  282 (291)
                         +++++++|    +++|+++...|.+.  ..+..+++||+|||||.||++...
T Consensus        68 ~~dl~~~~~~l----~~~Gv~~~~~~~~~~~~~~~~~~~~~~DPdG~~iE~~~~~  118 (120)
T cd07252          68 EAALDALAARL----RAAGVAVEEGSAELAAERGVEGLIRFADPDGNRHELFWGP  118 (120)
T ss_pred             HHHHHHHHHHH----HHcCCeEEEcCHHHHhhCCCcEEEEEECCCCCEEEEEecc
Confidence               77778888    99999998765321  222347899999999999998754

13.11.39) 1 from Rhodococcus globerulus P6 (BphC1-RGP6) and similar proteins. This subfamily contains the N-terminal, non-catalytic, domain of BphC1-RGP6 and similar proteins. BphC catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). This subfamily of BphCs belongs to the type I extradiol dioxygenase family, which require a metal in the active site in its catalytic mechanism. Polychlorinated biphenyl degrading bacteria demonstrate a multiplicity of 2,3-dihydroxybiphenyl 1,2-dioxygenases. For example, three types of BphC enzymes have been found in Rhodococcus globerulus (BphC1-RGP6 - BphC3-RGP6), all three enzymes are type I extradiol dioxygenases. BphC1-RGP6 has an internal duplication, it is a two-domain dioxygenase which forms octamers, and has Fe(II) at the catalytic site. Its N-

>cd08362 BphC5-RrK37_N_like N-terminal, non-catalytic, domain of BphC5 (2,3-dihydroxybiphenyl 1,2-dioxygenase) from Rhodococcus rhodochrous K37, and similar proteins

Probab=99.63  E-value=1.9e-14  Score=106.16  Aligned_cols=113  Identities=22%  Similarity=0.315  Sum_probs=81.9

Q ss_pred             ccceeeEEEEeCCHHHHHHHHHHhcCCEEEEEeccCCCceeeEEeeccCCCcceEEEeeecCCCCcccCCCCceEEEEEE
Q 022831           21 KRRLLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHLAIAT  100 (291)
Q Consensus        21 ~~~i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~g~~~~~i~~~v  100 (291)
                      +.+|+|+.|.|+|++++++||+++|||++.....    .  ..++.... .....+.+...       ..++..|++|.+
T Consensus         1 ~~~i~hv~l~v~d~~~s~~FY~~~lG~~~~~~~~----~--~~~~~~~~-~~~~~~~~~~~-------~~~~~~~~~~~v   66 (120)
T cd08362           1 VTALRGVGLGVPDLAAAAAFYREVWGLSVVAEDD----G--IVYLRATG-SEHHILRLRRS-------DRNRLDVVSFSV   66 (120)
T ss_pred             CceeeEEEEecCCHHHHHHHHHhCcCcEEEEecC----C--EEEEECCC-CccEEEEeccC-------CCCCCceEEEEe
Confidence            4689999999999999999999999999875422    1  34554322 22233333221       123567999999


Q ss_pred             ---CCHHHHHHHHHHcCCeeeeCCccC--CCCceEEEEEECCCCcEEEEEecC
Q 022831          101 ---EDVYKMVENIRAKGGNVTREPGPL--KGMTTHFAFVKDPDGYIFELIQRG  148 (291)
Q Consensus       101 ---~d~~~~~~~l~~~G~~~~~~~~~~--~~g~~~~~~~~dP~G~~iel~~~~  148 (291)
                         +++++++++|.++|+++..++...  +++.+ .++++||+|+.|+|+...
T Consensus        67 ~~~~~l~~~~~~l~~~G~~~~~~~~~~~~~~~~~-~~~~~DP~G~~iel~~~~  118 (120)
T cd08362          67 ASRADVDALARQVAARGGTVLSEPGATDDPGGGY-GFRFFDPDGRLIEFSADV  118 (120)
T ss_pred             CCHHHHHHHHHHHHHcCCceecCCcccCCCCCce-EEEEECCCCCEEEEEecc
Confidence               468999999999999987665432  34433 578999999999998754

2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC) catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). The enzyme contains a N-terminal and a C-terminal domain of similar structure fold, resulting from an ancient gene duplication. BphC belongs to the type I extradiol dioxygenase family, which requires a metal in the active site for its catalytic activity. Polychlorinated biphenyl degrading bacteria demonstrate multiplicity of BphCs. Bacterium Rhodococcus rhodochrous K37 has eight genes encoding BphC enzymes. This family includes the N-terminal domain of BphC5-RrK37. The crystal structure of the protein from Novosphingobium aromaticivorans has a Mn(II)in the active site, although most proteins of type I extradiol dioxyge

>cd07246 Glo_EDI_BRP_like_8 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.63  E-value=1.3e-14  Score=107.23  Aligned_cols=116  Identities=21%  Similarity=0.225  Sum_probs=83.6

Q ss_pred             eeeeeCCchhhHHHHHHhcCCeeeeeccCcccceeeeeeccCCCCcceEEEEeEecCce--eeccCceeeEEEEEecChH
Q 022831          157 VMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVT--EYTKGNAYAQVAISTDDVY  234 (291)
Q Consensus       157 v~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~--~~~~~~g~~hia~~v~di~  234 (291)
                      ..|.|+|++++.+||.++||+........+++......+..+    ...+.+.......  ....+.+..|++|.|+|++
T Consensus         5 ~~l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~----~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~d~~   80 (122)
T cd07246           5 PYLIVRDAAAAIDFYKKAFGAEELERMPDDDGRVMHAELRIG----DSVLMLADEFPEHGSPASWGGTPVSLHLYVEDVD   80 (122)
T ss_pred             EEEEECCHHHHHHHHHHhhCCEEEEEEeCCCCCEEEEEEEEC----CEEEEEecCCcccCCCCCCCCceEEEEEEeCCHH
Confidence            348899999999999999999987765433333333333332    1344554321110  0112456789999999999


Q ss_pred             HHHHHHHHHHHhhCCeeeecccccCCCCceEEEEECCCCCeEEEEec
Q 022831          235 KSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDN  281 (291)
Q Consensus       235 ~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iel~~~  281 (291)
                      ++++++    .+.|+++..+|...+. +.+.++++||||++|+|.+.
T Consensus        81 ~~~~~l----~~~G~~~~~~~~~~~~-g~~~~~~~DP~G~~~~l~~~  122 (122)
T cd07246          81 ATFARA----VAAGATSVMPPADQFW-GDRYGGVRDPFGHRWWIATH  122 (122)
T ss_pred             HHHHHH----HHCCCeEecCcccccc-cceEEEEECCCCCEEEEecC
Confidence            999999    9999999988876554 57899999999999999874

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The structures of this family demonstrate domain swapping, which is shared by glyoxalase I and antibiotic resistance proteins.

>cd08348 BphC2-C3-RGP6_C_like The single-domain 2,3-dihydroxybiphenyl 1,2-dioxygenases (BphC, EC 1

Probab=99.62  E-value=4.5e-14  Score=106.32  Aligned_cols=120  Identities=23%  Similarity=0.387  Sum_probs=82.8

Q ss_pred             ceeeEEEEeCCHHHHHHHHHHhcCCEEEEEeccCCCceeeEEeeccCCCcceEEEeeecCCCCcccCCCCceEEEEEECC
Q 022831           23 RLLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHLAIATED  102 (291)
Q Consensus        23 ~i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~g~~~~~i~~~v~d  102 (291)
                      +|+|+.|.|+|++++++||+++|||++......  .  ...++..+. .....+.+.............+..|++|.|+|
T Consensus         1 ~i~hv~l~v~D~~~s~~FY~~~lG~~~~~~~~~--~--~~~~~~~~~-~~~~~l~l~~~~~~~~~~~~~~~~h~~f~v~~   75 (134)
T cd08348           1 RLSHVVLYVRDLEAMVRFYRDVLGFTVTDRGPL--G--GLVFLSRDP-DEHHQIALITGRPAAPPPGPAGLNHIAFEVDS   75 (134)
T ss_pred             CeeEEEEEecCHHHHHHHHHHhcCCEEEeeccC--C--cEEEEEecC-CCceEEEEEecCCCCCCCCCCCceEEEEEeCC
Confidence            589999999999999999999999998765331  1  245554431 12334444443222111233478899999987


Q ss_pred             HH---HHHHHHHHcCCeeeeCCccCCCCceEEEEEECCCCcEEEEEecCCC
Q 022831          103 VY---KMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFELIQRGPT  150 (291)
Q Consensus       103 ~~---~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dP~G~~iel~~~~~~  150 (291)
                      ++   +++++|.+.|+++..... . ++ ...++++||+|+.||+....+.
T Consensus        76 ~~~v~~~~~~l~~~G~~~~~~~~-~-~~-~~~~~~~DP~G~~ie~~~~~~~  123 (134)
T cd08348          76 LDDLRDLYERLRAAGITPVWPVD-H-GN-AWSIYFRDPDGNRLELFVDTPW  123 (134)
T ss_pred             HHHHHHHHHHHHHCCCCccccCC-C-Cc-eeEEEEECCCCCEEEEEEcCCC
Confidence            55   578999999998765432 2 22 2357899999999999977643

13.11.39) from Rhodococcus globerulus P6, BphC2-RGP6 and BphC3-RGP6, and similar proteins. This subfamily contains Rhodococcus globerulus P6 BphC2-RGP6 and BphC3-RGP6, and similar proteins. BphC catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, yielding 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoic acid. This is the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). This subfamily of BphCs belongs to the type I extradiol dioxygenase family, which require a metal in the active site in its catalytic mechanism. Most type I extradiol dioxygenases are activated by Fe(II). Polychlorinated biphenyl degrading bacteria demonstrate a multiplicity of BphCs. For example, three types of BphC enzymes have been found in Rhodococcus globerulus (BphC1-RGP6 - BphC3-RGP6), all three enzymes are type I extradiol dioxygenases. BphC2-RGP6 and BphC3-RGP6 are

>cd07245 Glo_EDI_BRP_like_9 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.62  E-value=5.4e-15  Score=107.52  Aligned_cols=113  Identities=25%  Similarity=0.179  Sum_probs=81.2

Q ss_pred             ceeeeeeeCCchhhHHHHHHhcCCeeeeeccCcccceeeeeeccCCCCcceEEEEeEecCcee-eccCceeeEEEEEecC
Q 022831          154 LCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTE-YTKGNAYAQVAISTDD  232 (291)
Q Consensus       154 ~~hv~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~-~~~~~g~~hia~~v~d  232 (291)
                      |+|+.|.|+|++++.+||+++||+........+.   ...++..++.   ..+.+........ ...+.+..|++|.|+|
T Consensus         1 i~Hi~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~---~~~~~~~~~~---~~i~l~~~~~~~~~~~~~~~~~~~~~~v~d   74 (114)
T cd07245           1 LDHVALRVPDLEASRAFYTDVLGLEEGPRPPFLF---PGAWLYAGDG---PQLHLIEEDPPDALPEGPGRDDHIAFRVDD   74 (114)
T ss_pred             CCeEEEecCCHHHHHHHHHHccCCcccCcCCCCC---CceEEEeCCC---cEEEEEecCCCccccCCCcccceEEEEeCC
Confidence            6899999999999999999999999765433221   1223332221   2445543322211 1224577899999999


Q ss_pred             hHHHHHHHHHHHHhhCCeeeecccccCCCCceEEEEECCCCCeEEE
Q 022831          233 VYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVL  278 (291)
Q Consensus       233 i~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iel  278 (291)
                      ++++++++    +++|+++..++.+  ..+.+.++++||+|+.|||
T Consensus        75 ~~~~~~~l----~~~g~~~~~~~~~--~~~~~~~~~~DP~G~~iE~  114 (114)
T cd07245          75 LDAFRARL----KAAGVPYTESDVP--GDGVRQLFVRDPDGNRIEL  114 (114)
T ss_pred             HHHHHHHH----HHcCCCcccccCC--CCCccEEEEECCCCCEEeC
Confidence            99999999    9999999887765  2346789999999999996

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases.

>cd08351 ChaP_like ChaP, an enzyme involved in the biosynthesis of the antitumor agent chartreusin (cha); and similar proteins

Probab=99.62  E-value=8.8e-15  Score=108.57  Aligned_cols=110  Identities=18%  Similarity=0.219  Sum_probs=80.3

Q ss_pred             CceeeeeeeCCchhhHHHHHHhcCCeeeeeccCcccceeeeeeccCCCCcceEEEEeEecCceeeccCceeeEEEEEec-
Q 022831          153 PLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAISTD-  231 (291)
Q Consensus       153 ~~~hv~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~~hia~~v~-  231 (291)
                      ++.|+.|.|+|++++.+||+++||++.....    +.+....++  +   ...+.+....      ...+..|++|.|+ 
T Consensus         4 ~~~hv~l~v~Dl~~s~~FY~~~lG~~~~~~~----~~~~~~~~~--~---~~~l~~~~~~------~~~~~~h~a~~v~~   68 (123)
T cd08351           4 TLNHTIVPARDREASAEFYAEILGLPWAKPF----GPFAVVKLD--N---GVSLDFAQPD------GEIPPQHYAFLVSE   68 (123)
T ss_pred             eEeEEEEEcCCHHHHHHHHHHhcCCEeeecc----CCEEEEEcC--C---CcEEEEecCC------CCCCcceEEEEeCH
Confidence            5799999999999999999999999976532    112122222  1   2345543321      1235689999886 


Q ss_pred             -ChHHHHHHHHHHHHhhCCeeeeccccc------CCCCceEEEEECCCCCeEEEEec
Q 022831          232 -DVYKSAEVVNLVTQELGGKITRQPGPI------PGLNTKITSFVDPDGWKTVLVDN  281 (291)
Q Consensus       232 -di~~~~~~l~~~~~~~G~~~~~~p~~~------~~~~~~~~~~~DPdG~~iel~~~  281 (291)
                       |++++++++    ++.|+++...|...      ...+.+.+||+|||||.|||+++
T Consensus        69 ~dl~~~~~~l----~~~G~~~~~~~~~~~~~~~~~~~g~~~~~f~DPdG~~iEl~~~  121 (123)
T cd08351          69 EEFDRIFARI----RERGIDYWADPQRTEPGQINTNDGGRGVYFLDPDGHLLEIITR  121 (123)
T ss_pred             HHHHHHHHHH----HHcCCceecCCcccccccccCCCCeeEEEEECCCCCEEEEEec
Confidence             689999999    99999987766543      12357899999999999999987

ChaP is an enzyme involved in the biosynthesis of the potent antitumor agent chartreusin (cha). Cha is an aromatic polyketide glycoside produced by Streptomyces chartreusis. ChaP may play a role as a meta-cleavage dioxygenase in the oxidative rearrangement of the anthracyclic polyketide. ChaP belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases.

>cd07255 Glo_EDI_BRP_like_12 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.62  E-value=1.3e-14  Score=107.81  Aligned_cols=117  Identities=23%  Similarity=0.300  Sum_probs=83.5

Q ss_pred             CceeeeeeeCCchhhHHHHHHhcCCeeeeeccCcccceeeeeeccCCCCcceEEEEeEecCce-eeccCceeeEEEEEec
Q 022831          153 PLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVT-EYTKGNAYAQVAISTD  231 (291)
Q Consensus       153 ~~~hv~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~-~~~~~~g~~hia~~v~  231 (291)
                      +|+|+.|.|+|++++.+||+++|||++....+      ...++..++  ....|.+....... ......+..|++|.|+
T Consensus         2 ~i~hi~l~v~d~~~~~~Fy~~~lG~~~~~~~~------~~~~l~~~~--~~~~l~l~~~~~~~~~~~~~~~~~hi~f~v~   73 (125)
T cd07255           2 RIGAVTLRVADLERSLAFYQDVLGLEVLERTD------STAVLGTGG--KRPLLVLEEDPDAPPAPPGATGLYHFAILLP   73 (125)
T ss_pred             EEEEEEEEECCHHHHHHHHHhccCcEEEEcCC------CEEEEecCC--CeEEEEEEeCCCCCcccCCCCcEEEEEEECC
Confidence            47899999999999999999999999876521      123344322  23556664433221 1223457899999997


Q ss_pred             C---hHHHHHHHHHHHHhhCCeeeecccccCCCCceEEEEECCCCCeEEEEechhh
Q 022831          232 D---VYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNEDF  284 (291)
Q Consensus       232 d---i~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~~~  284 (291)
                      +   ++++++++    +++|+++.. +...+.  .+.+|++|||||+|||....|.
T Consensus        74 ~~~~v~~~~~~l----~~~g~~~~~-~~~~~~--~~~~~~~DPdG~~iEi~~~~~~  122 (125)
T cd07255          74 SRADLAAALRRL----IELGIPLVG-ASDHLV--SEALYLSDPEGNGIEIYADRPR  122 (125)
T ss_pred             CHHHHHHHHHHH----HHcCCceec-cccccc--eeEEEEECCCCCEEEEEEecCc
Confidence            4   78888888    999998754 333333  4678999999999999987664

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd08364 FosX FosX, a fosfomycin resistance protein, catalyzes the addition of a water molecule to the C1 position of the antibiotic with inversion of configuration at C1

Probab=99.62  E-value=1.3e-14  Score=108.92  Aligned_cols=117  Identities=16%  Similarity=0.196  Sum_probs=79.5

Q ss_pred             CCceeeeeeeCCchhhHHHHHHhcCCeeeeeccCcccc-eeeeeeccCCCCcceEEEEeEecCceeeccCceeeEEEEEe
Q 022831          152 EPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELK-CALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAIST  230 (291)
Q Consensus       152 ~~~~hv~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~~hia~~v  230 (291)
                      ..++|+.|.|+|++++++||+++||+++..+....... ....++..+    ...+.+.....    ...++++|++|.|
T Consensus         3 ~~i~hv~l~V~dl~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~----~~~i~l~~~~~----~~~~~~~Hiaf~v   74 (131)
T cd08364           3 EGLSHITLIVKDLNKTTAFLQNIFNAREVYSSGDKTFSLSKEKFFLIG----GLWIAIMEGDS----LQERTYNHIAFKI   74 (131)
T ss_pred             ccEeEEEEEeCCHHHHHHHHHHHhCCeeEEecccccccccceeEEEcC----CeEEEEecCCC----CCCCCceEEEEEc
Confidence            35899999999999999999999999875543211000 000111111    24555543211    1134689999999


Q ss_pred             c--ChHHHHHHHHHHHHhhCCeeeecccccCCCCceEEEEECCCCCeEEEEec
Q 022831          231 D--DVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDN  281 (291)
Q Consensus       231 ~--di~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iel~~~  281 (291)
                      +  |++++++++    +++|+++..+. ......++.+||+|||||.|||...
T Consensus        75 ~~~~ld~~~~~l----~~~gv~~~~~~-~~~~~~g~~~yf~DPdG~~iEl~~~  122 (131)
T cd08364          75 SDSDVDEYTERI----KALGVEMKPPR-PRVQGEGRSIYFYDFDNHLFELHTG  122 (131)
T ss_pred             CHHHHHHHHHHH----HHCCCEEecCC-ccccCCceEEEEECCCCCEEEEecC
Confidence            8  688888889    99999875433 2232246899999999999999964

This subfamily family contains FosX, a fosfomycin resistant protein. Fosfomycin inhibits the enzyme UDP-Nacetylglucosamine-3-enolpyruvyltransferase (MurA), which catalyzes the first committed step in bacterial cell wall biosynthesis. FosX catalyzes the addition of a water molecule to the C1 position of the antibiotic with inversion of the configuration at C1 in the presence of Mn(II). The hydrated fosfomycin loses the inhibition activity. FosX is evolutionarily related to glyoxalase I and type I extradiol dioxygenases.

>PF12681 Glyoxalase_2: Glyoxalase-like domain; PDB: 3G12_B 1JIF_B 1JIE_B 1QTO_A 3OXH_A 2PJS_A 2RBB_A 3SK1_B 3SK2_B 3RRI_A

Probab=99.62  E-value=1.7e-14  Score=104.31  Aligned_cols=108  Identities=22%  Similarity=0.255  Sum_probs=75.7

Q ss_pred             EEeCCHHHHHHHHHHhcCCEEEEEeccCCCceeeEEeeccCCCcceEEEeeecCCCCcccCCCCceEEEEEECCHHHHHH
Q 022831           29 YRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHLAIATEDVYKMVE  108 (291)
Q Consensus        29 l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~g~~~~~i~~~v~d~~~~~~  108 (291)
                      |.|+|++++++||+++|||++......      ...+..+.....-...+....  .......+..|++|.|+|++++++
T Consensus         1 l~v~d~~~a~~FY~~~lg~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~v~dv~~~~~   72 (108)
T PF12681_consen    1 LPVSDLEAAAAFYEDVLGFEVVFDDPD------YVDFSLGFRFHDGVIEFLQFP--DPPGPPGGGFHLCFEVEDVDALYE   72 (108)
T ss_dssp             EEESSHHHHHHHHHHTTTSEEEEEETS------EEEEEETEEEEEEEEEEEEEE--SSSSSSSSEEEEEEEESHHHHHHH
T ss_pred             CccCCHHHHHHHHHHhcCCEEEEeCCC------eEEEEeccchhhhhHHHccCC--ccccCCCceeEEEEEEcCHHHHHH
Confidence            689999999999999999999874321      333333211000112222211  122234477899999999999999


Q ss_pred             HHHHcCCeeeeCCccCCCCceEEEEEECCCCcEEEEE
Q 022831          109 NIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFELI  145 (291)
Q Consensus       109 ~l~~~G~~~~~~~~~~~~g~~~~~~~~dP~G~~iel~  145 (291)
                      ++.++|+++..+|...++|.+ .+++.||+|+.|+|+
T Consensus        73 ~l~~~G~~~~~~~~~~~~g~~-~~~~~DPdG~~ie~~  108 (108)
T PF12681_consen   73 RLKELGAEIVTEPRDDPWGQR-SFYFIDPDGNRIEFC  108 (108)
T ss_dssp             HHHHTTSEEEEEEEEETTSEE-EEEEE-TTS-EEEEE
T ss_pred             HHHHCCCeEeeCCEEcCCCeE-EEEEECCCCCEEEeC
Confidence            999999999888888777755 488999999999985

...

>cd08348 BphC2-C3-RGP6_C_like The single-domain 2,3-dihydroxybiphenyl 1,2-dioxygenases (BphC, EC 1

Probab=99.61  E-value=2.1e-14  Score=108.16  Aligned_cols=121  Identities=21%  Similarity=0.226  Sum_probs=83.4

Q ss_pred             CceeeeeeeCCchhhHHHHHHhcCCeeeeeccCcccceeeeeeccCCCCcceEEEEeEecCceeeccCceeeEEEEEecC
Q 022831          153 PLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAISTDD  232 (291)
Q Consensus       153 ~~~hv~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~~hia~~v~d  232 (291)
                      +|.|+.|.|+|++++++||+++|||+.....+.  .  ...++..+. .....+.+.............++.|++|.|+|
T Consensus         1 ~i~hv~l~v~D~~~s~~FY~~~lG~~~~~~~~~--~--~~~~~~~~~-~~~~~l~l~~~~~~~~~~~~~~~~h~~f~v~~   75 (134)
T cd08348           1 RLSHVVLYVRDLEAMVRFYRDVLGFTVTDRGPL--G--GLVFLSRDP-DEHHQIALITGRPAAPPPGPAGLNHIAFEVDS   75 (134)
T ss_pred             CeeEEEEEecCHHHHHHHHHHhcCCEEEeeccC--C--cEEEEEecC-CCceEEEEEecCCCCCCCCCCCceEEEEEeCC
Confidence            478999999999999999999999997765321  1  233433221 12345555443221111224578999999998


Q ss_pred             hHH---HHHHHHHHHHhhCCeeeecccccCCCCceEEEEECCCCCeEEEEechhhh
Q 022831          233 VYK---SAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNEDFL  285 (291)
Q Consensus       233 i~~---~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~~~~  285 (291)
                      +++   +++++    .++|+++...+. .+  +.+.+|++||+||+|||+...+..
T Consensus        76 ~~~v~~~~~~l----~~~G~~~~~~~~-~~--~~~~~~~~DP~G~~ie~~~~~~~~  124 (134)
T cd08348          76 LDDLRDLYERL----RAAGITPVWPVD-HG--NAWSIYFRDPDGNRLELFVDTPWY  124 (134)
T ss_pred             HHHHHHHHHHH----HHCCCCccccCC-CC--ceeEEEEECCCCCEEEEEEcCCCC
Confidence            664   56677    899998876543 22  257889999999999999876654

13.11.39) from Rhodococcus globerulus P6, BphC2-RGP6 and BphC3-RGP6, and similar proteins. This subfamily contains Rhodococcus globerulus P6 BphC2-RGP6 and BphC3-RGP6, and similar proteins. BphC catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, yielding 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoic acid. This is the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). This subfamily of BphCs belongs to the type I extradiol dioxygenase family, which require a metal in the active site in its catalytic mechanism. Most type I extradiol dioxygenases are activated by Fe(II). Polychlorinated biphenyl degrading bacteria demonstrate a multiplicity of BphCs. For example, three types of BphC enzymes have been found in Rhodococcus globerulus (BphC1-RGP6 - BphC3-RGP6), all three enzymes are type I extradiol dioxygenases. BphC2-RGP6 and BphC3-RGP6 are

>TIGR03211 catechol_2_3 catechol 2,3 dioxygenase

Probab=99.61  E-value=2.5e-14  Score=122.83  Aligned_cols=121  Identities=17%  Similarity=0.252  Sum_probs=84.6

Q ss_pred             CcCCccceeeEEEEeCCHHHHHHHHHHhcCCEEEEEeccCCCce-eeEEeeccCCCcceEEEeeecCCCCcccCCCC-ce
Q 022831           17 PKKDKRRLLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKY-SNAFLGFGPEQSYFVVELTYNYGVTSYDIGTG-FG   94 (291)
Q Consensus        17 ~~~~~~~i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~l~~~~~~~~~~~g~~-~~   94 (291)
                      ..+.+++|+||+|.|+|++++++||+++|||++......+++.. ...|+..+.. . ..+.+...       .+.+ +.
T Consensus       139 ~~~~~~~i~Hi~l~V~Dl~~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~-------~~~g~~~  209 (303)
T TIGR03211       139 RGVGARRLDHCLLYGEDVAENTRFFTEVLGFRLTEQVVLGDGKEQAAAWLSVSNK-A-HDIAFVGD-------PEPGKLH  209 (303)
T ss_pred             CCcCceeEEEEeEEeCCHHHHHHHHHHhcCCEEEeeEEcCCCcEEEEEEEEcCCC-C-cccceecC-------CCCCceE
Confidence            33568899999999999999999999999999876544333322 2345543221 1 11211111       1234 88


Q ss_pred             EEEEEECC---HHHHHHHHHHcCCeeeeCCccCCCCceEEEEEECCCCcEEEEEe
Q 022831           95 HLAIATED---VYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFELIQ  146 (291)
Q Consensus        95 ~i~~~v~d---~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dP~G~~iel~~  146 (291)
                      |+||.|+|   +++++++|.++|+++...|.....+...++||+||+|+.||+..
T Consensus       210 Hiaf~v~~~~~v~~~~~~l~~~G~~~~~~p~~~~~~~~~~~y~~DPdG~~iEl~~  264 (303)
T TIGR03211       210 HVSFFLDSWEDVLKAADVMSKNDVSIDIGPTRHGITRGQTIYFFDPSGNRNETFG  264 (303)
T ss_pred             EEEEEcCCHHHHHHHHHHHHhCCCceeeCCcccCCCCceEEEEECCCCCEEEEec
Confidence            99999986   55578899999999877666544333446899999999999983

Members of this family all are enzymes active as catechol 2,3 dioxygenase (1.13.11.2), although some members have highly significant activity on catechol derivatives such as 3-methylcatechol, 3-chlorocatechol, and 4-chlorocatechol (see Mars, et al.). This enzyme is also called metapyrocatechase, as it performs a meta-cleavage (an extradiol ring cleavage), in contrast to the ortho-cleavage (intradiol ring cleavage)performed by catechol 1,2-dioxygenase (EC 1.13.11.1), also called pyrocatechase.

>cd07238 Glo_EDI_BRP_like_5 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.61  E-value=4.8e-14  Score=102.70  Aligned_cols=109  Identities=19%  Similarity=0.241  Sum_probs=79.1

Q ss_pred             eEEEEeCCHHHHHHHHHHhcCCEEEEEeccCCCceeeEEeeccCCCcceEEEeeecCCCCcccCCCCceEEEEEECCHHH
Q 022831           26 HAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHLAIATEDVYK  105 (291)
Q Consensus        26 hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~g~~~~~i~~~v~d~~~  105 (291)
                      +..|.|+|++++++||+++|||++...    .+  ...++..++ .....+.+.....     .+....|++|.|+|+++
T Consensus         3 ~~~l~v~Dl~~s~~FY~~~lG~~~~~~----~~--~~~~~~~~~-~~~~~~~~~~~~~-----~~~~~~~i~~~v~d~~~   70 (112)
T cd07238           3 VPNLPVADPEAAAAFYADVLGLDVVMD----HG--WIATFASPQ-NMTVQVSLATEGG-----TATVVPDLSIEVDDVDA   70 (112)
T ss_pred             cceEecCCHHHHHHHHHHhcCceEEEc----CC--ceEEEeecC-CCCcEEEEecCCC-----CCCCCCEEEEEeCCHHH
Confidence            357889999999999999999998642    11  123333222 2234444432211     12245699999999999


Q ss_pred             HHHHHHHcCCeeeeCCccCCCCceEEEEEECCCCcEEEEEec
Q 022831          106 MVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFELIQR  147 (291)
Q Consensus       106 ~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dP~G~~iel~~~  147 (291)
                      ++++|+++|+++..++....+|.+. +++.||+|+.|+++++
T Consensus        71 ~~~~l~~~G~~~~~~~~~~~~g~~~-~~~~DP~Gn~i~~~~~  111 (112)
T cd07238          71 ALARAVAAGFAIVYGPTDEPWGVRR-FFVRDPFGKLVNILTH  111 (112)
T ss_pred             HHHHHHhcCCeEecCCccCCCceEE-EEEECCCCCEEEEEEc
Confidence            9999999999988877776776554 7899999999999975

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The structure of this family is a that of a strand-swapped dimer.

>cd08359 Glo_EDI_BRP_like_22 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.60  E-value=2.2e-14  Score=105.61  Aligned_cols=112  Identities=19%  Similarity=0.180  Sum_probs=78.9

Q ss_pred             eeeeeeCCchhhHHHHHHhcCCeeeeeccCcccceeeeeeccCCCCcceEEEEeEecCce----eeccCceeeEEEEEec
Q 022831          156 QVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVT----EYTKGNAYAQVAISTD  231 (291)
Q Consensus       156 hv~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~----~~~~~~g~~hia~~v~  231 (291)
                      +..|.|+|++++.+||+++|||+.....+    .+.  .+..++.  ...+.+.......    ......+..|++|.|+
T Consensus         4 ~~~l~v~D~~~s~~FY~~~lG~~~~~~~~----~~~--~~~~~~~--~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~v~   75 (119)
T cd08359           4 YPVIVTDDLAETADFYVRHFGFTVVFDSD----WYV--SLRSPDG--GVELAFMLPGHETVPAAQYQFQGQGLILNFEVD   75 (119)
T ss_pred             eeEEEECCHHHHHHHHHHhhCcEEEeccC----cEE--EEecCCC--ceEEEEccCCCCCCcchhcccCCceEEEEEEEC
Confidence            56799999999999999999999775421    122  2221111  2444443321110    0111223358999999


Q ss_pred             ChHHHHHHHHHHHHhhCCeeeecccccCCCCceEEEEECCCCCeEEEEe
Q 022831          232 DVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVD  280 (291)
Q Consensus       232 di~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iel~~  280 (291)
                      |++++++++    .++|+++..+|...+. +.+.++++|||||.|||+|
T Consensus        76 did~~~~~l----~~~G~~~~~~~~~~~~-g~~~~~~~DP~G~~ie~~~  119 (119)
T cd08359          76 DVDAEYERL----KAEGLPIVLPLRDEPW-GQRHFIVRDPNGVLIDIVQ  119 (119)
T ss_pred             CHHHHHHHH----HhcCCCeeeccccCCC-cceEEEEECCCCCEEEEEC
Confidence            999999999    9999999888876664 5688999999999999986

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The structures of this family demonstrate domain swapping, which is shared by glyoxalase I and antibiotic resistance proteins.

>cd07238 Glo_EDI_BRP_like_5 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.60  E-value=2.5e-14  Score=104.20  Aligned_cols=108  Identities=21%  Similarity=0.243  Sum_probs=78.8

Q ss_pred             eeeeeCCchhhHHHHHHhcCCeeeeeccCcccceeeeeeccCCCCcceEEEEeEecCceeeccCceeeEEEEEecChHHH
Q 022831          157 VMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAISTDDVYKS  236 (291)
Q Consensus       157 v~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~~hia~~v~di~~~  236 (291)
                      ..|.|+|++++.+||+++|||+.....   +  . ..++..++ ..+..+.+.....     .++...|++|.|+|++++
T Consensus         4 ~~l~v~Dl~~s~~FY~~~lG~~~~~~~---~--~-~~~~~~~~-~~~~~~~~~~~~~-----~~~~~~~i~~~v~d~~~~   71 (112)
T cd07238           4 PNLPVADPEAAAAFYADVLGLDVVMDH---G--W-IATFASPQ-NMTVQVSLATEGG-----TATVVPDLSIEVDDVDAA   71 (112)
T ss_pred             ceEecCCHHHHHHHHHHhcCceEEEcC---C--c-eEEEeecC-CCCcEEEEecCCC-----CCCCCCEEEEEeCCHHHH
Confidence            468899999999999999999975321   1  1 22222211 1234455433211     123457999999999999


Q ss_pred             HHHHHHHHHhhCCeeeecccccCCCCceEEEEECCCCCeEEEEec
Q 022831          237 AEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDN  281 (291)
Q Consensus       237 ~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iel~~~  281 (291)
                      ++++    ++.|+++..+|...++ +.+.+|+.||+||.|||+++
T Consensus        72 ~~~l----~~~G~~~~~~~~~~~~-g~~~~~~~DP~Gn~i~~~~~  111 (112)
T cd07238          72 LARA----VAAGFAIVYGPTDEPW-GVRRFFVRDPFGKLVNILTH  111 (112)
T ss_pred             HHHH----HhcCCeEecCCccCCC-ceEEEEEECCCCCEEEEEEc
Confidence            9999    9999999888876664 45789999999999999975

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The structure of this family is a that of a strand-swapped dimer.

>cd07240 ED_TypeI_classII_N N-terminal domain of type I, class II extradiol dioxygenases; non-catalytic domain

Probab=99.60  E-value=2.5e-14  Score=104.91  Aligned_cols=111  Identities=24%  Similarity=0.332  Sum_probs=82.4

Q ss_pred             CceeeeeeeCCchhhHHHHHHhcCCeeeeeccCcccceeeeeeccCCCCcceEEEEeEecCceeeccCceeeEEEEEec-
Q 022831          153 PLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAISTD-  231 (291)
Q Consensus       153 ~~~hv~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~~hia~~v~-  231 (291)
                      ++.|+.|.|+|++++.+||+++|||++....+      ...++..+. ..+..+.+...       ...+..|++|.|+ 
T Consensus         2 ~l~hv~l~v~d~~~~~~FY~~~lg~~~~~~~~------~~~~~~~~~-~~~~~~~~~~~-------~~~~~~h~~~~v~~   67 (117)
T cd07240           2 RIAYAELEVPDLERALEFYTDVLGLTVLDRDA------GSVYLRCSE-DDHHSLVLTEG-------DEPGVDALGFEVAS   67 (117)
T ss_pred             ceeEEEEecCCHHHHHHHHHhccCcEEEeecC------CeEEEecCC-CCcEEEEEEeC-------CCCCceeEEEEcCC
Confidence            58999999999999999999999999876532      122333221 12344444331       1347899999998 


Q ss_pred             --ChHHHHHHHHHHHHhhCCeeeecccccCCCCceEEEEECCCCCeEEEEech
Q 022831          232 --DVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNE  282 (291)
Q Consensus       232 --di~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~  282 (291)
                        +++++.+++    +++|+++...|...++ +++.+|++||+||+||++...
T Consensus        68 ~~~v~~~~~~l----~~~g~~~~~~~~~~~~-~~~~~~~~DP~G~~ie~~~~~  115 (117)
T cd07240          68 EEDLEALAAHL----EAAGVAPEEASDPEPG-VGRGLRFQDPDGHLLELFVEA  115 (117)
T ss_pred             HHHHHHHHHHH----HHcCCceEEcCccCCC-CceEEEEECCCCCEEEEEEcc
Confidence              577777777    9999999887764554 467899999999999999764

This family contains the N-terminal, non-catalytic, domain of type I, class II extradiol dioxygenases. Dioxygenases catalyze the incorporation of both atoms of molecular oxygen into substrates using a variety of reaction mechanisms, resulting in the cleavage of aromatic rings. Two major groups of dioxygenases have been identified according to the cleavage site; extradiol enzymes cleave the aromatic ring between a hydroxylated carbon and an adjacent non-hydroxylated carbon, whereas intradiol enzymes cleave the aromatic ring between two hydroxyl groups. Extradiol dioxygenases are classified into type I and type II enzymes. Type I extradiol dioxygenases include class I and class II enzymes. These two classes of enzymes show sequence similarity; the two-domain class II enzymes evolved from a class I enzyme through gene duplication. The extradiol dioxygenases represented in this fa

>cd07244 FosA FosA, a Fosfomycin resistance protein, catalyzes the addition of glutathione to the antibiotic fosfomycin, making it inactive

Probab=99.60  E-value=3.1e-14  Score=105.26  Aligned_cols=109  Identities=25%  Similarity=0.424  Sum_probs=77.6

Q ss_pred             ceeeEEEEeCCHHHHHHHHHHhcCCEEEEEeccCCCceeeEEeeccCCCcceEEEeeecCCCCcccCCCCceEEEEEE--
Q 022831           23 RLLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHLAIAT--  100 (291)
Q Consensus        23 ~i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~g~~~~~i~~~v--  100 (291)
                      +|+|+.|.|+|++++++||+++|||++.....  .    ..++..+  ...+.+.+....     ....+..|++|.+  
T Consensus         1 ~i~hv~l~v~d~~~~~~FY~~vLG~~~~~~~~--~----~~~~~~~--~~~~~l~~~~~~-----~~~~~~~hi~f~v~~   67 (121)
T cd07244           1 GINHITLAVSDLERSVAFYVDLLGFKLHVRWD--K----GAYLEAG--DLWLCLSVDANV-----GPAKDYTHYAFSVSE   67 (121)
T ss_pred             CcceEEEEECCHHHHHHHHHHhcCCEEEEecC--C----ceEEecC--CEEEEEecCCCC-----CCCCCeeeEEEEeCH
Confidence            58999999999999999999999999865432  1    2344432  222233221111     1234678999999  


Q ss_pred             CCHHHHHHHHHHcCCeeeeCCccCCCCceEEEEEECCCCcEEEEEecC
Q 022831          101 EDVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFELIQRG  148 (291)
Q Consensus       101 ~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dP~G~~iel~~~~  148 (291)
                      +|+++++++|.++|+++..++..  .+  ..+||.||+|+.|||....
T Consensus        68 ~dl~~~~~~l~~~G~~~~~~~~~--~~--~~~~f~DPdG~~ie~~~~~  111 (121)
T cd07244          68 EDFASLKEKLRQAGVKEWKENTS--EG--DSFYFLDPDGHKLELHVGS  111 (121)
T ss_pred             HHHHHHHHHHHHcCCcccCCCCC--Cc--cEEEEECCCCCEEEEEeCC
Confidence            57999999999999987654332  22  3588999999999998654

This subfamily family contains FosA, a fosfomycin resistant protein. Fosfomycin inhibits the enzyme UDP-N-acetylglucosamine-3-enolpyruvyltransferase (MurA), which catalyzes the first committed step in bacterial cell wall biosynthesis. FosA, catalyzes the addition of glutathione to the antibiotic fosfomycin, (1R,2S)-epoxypropylphosphonic acid, making it inactive. FosA is a Mn(II) dependent enzyme. It is evolutionarily related to glyoxalase I and type I extradiol dioxygenases.

>PF12681 Glyoxalase_2: Glyoxalase-like domain; PDB: 3G12_B 1JIF_B 1JIE_B 1QTO_A 3OXH_A 2PJS_A 2RBB_A 3SK1_B 3SK2_B 3RRI_A

Probab=99.59  E-value=1.5e-14  Score=104.54  Aligned_cols=108  Identities=25%  Similarity=0.330  Sum_probs=75.5

Q ss_pred             eeeCCchhhHHHHHHhcCCeeeeeccCcccceeeeeeccCCCCcceEEEEeEecCceeeccCceeeEEEEEecChHHHHH
Q 022831          159 LRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAISTDDVYKSAE  238 (291)
Q Consensus       159 l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~~hia~~v~di~~~~~  238 (291)
                      |.|+|++++++||+++|||++....+    .+..+..+...  ......+.....  ......+..|++|.|+|++++++
T Consensus         1 l~v~d~~~a~~FY~~~lg~~~~~~~~----~~~~~~~~~~~--~~~~~~~~~~~~--~~~~~~~~~~~~~~v~dv~~~~~   72 (108)
T PF12681_consen    1 LPVSDLEAAAAFYEDVLGFEVVFDDP----DYVDFSLGFRF--HDGVIEFLQFPD--PPGPPGGGFHLCFEVEDVDALYE   72 (108)
T ss_dssp             EEESSHHHHHHHHHHTTTSEEEEEET----SEEEEEETEEE--EEEEEEEEEEES--SSSSSSSEEEEEEEESHHHHHHH
T ss_pred             CccCCHHHHHHHHHHhcCCEEEEeCC----CeEEEEeccch--hhhhHHHccCCc--cccCCCceeEEEEEEcCHHHHHH
Confidence            67999999999999999999887322    12222222100  011122222111  11224578999999999999999


Q ss_pred             HHHHHHHhhCCeeeecccccCCCCceEEEEECCCCCeEEEE
Q 022831          239 VVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLV  279 (291)
Q Consensus       239 ~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iel~  279 (291)
                      ++    +++|+++..+|...++ +.+.++++|||||+|||+
T Consensus        73 ~l----~~~G~~~~~~~~~~~~-g~~~~~~~DPdG~~ie~~  108 (108)
T PF12681_consen   73 RL----KELGAEIVTEPRDDPW-GQRSFYFIDPDGNRIEFC  108 (108)
T ss_dssp             HH----HHTTSEEEEEEEEETT-SEEEEEEE-TTS-EEEEE
T ss_pred             HH----HHCCCeEeeCCEEcCC-CeEEEEEECCCCCEEEeC
Confidence            99    9999999999888666 468999999999999986

...

>cd08345 Fosfomycin_RP Fosfomycin resistant protein; inhibits the biological function of fosfomycin

Probab=99.59  E-value=3.6e-14  Score=103.47  Aligned_cols=109  Identities=22%  Similarity=0.401  Sum_probs=75.7

Q ss_pred             eEEEEeCCHHHHHHHHHHhcCCEEEEEeccCCCceeeEEeeccCCCcceEEEeeecCCCCcccCCCCceEEEEEEC--CH
Q 022831           26 HAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHLAIATE--DV  103 (291)
Q Consensus        26 hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~g~~~~~i~~~v~--d~  103 (291)
                      ||.|.|+|++++++||+++|||++..+.+.      ..++..+  +  ..+.+.......  ..+.+..|++|.|+  |+
T Consensus         1 Hv~l~v~d~~~s~~Fy~~~lg~~~~~~~~~------~~~~~~~--~--~~l~~~~~~~~~--~~~~~~~hiaf~v~~~d~   68 (113)
T cd08345           1 HITLIVKDLNKSIAFYRDILGAELIYSSSK------EAYFELA--G--LWICLMEEDSLQ--GPERTYTHIAFQIQSEEF   68 (113)
T ss_pred             CeeEEECCHHHHHHHHHHhcCCeeeeccCc------eeEEEec--C--eEEEeccCCCcC--CCCCCccEEEEEcCHHHH
Confidence            899999999999999999999998654321      2344432  1  233333221111  12346789999994  79


Q ss_pred             HHHHHHHHHcCCeeeeCCccCCCCceEEEEEECCCCcEEEEEec
Q 022831          104 YKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFELIQR  147 (291)
Q Consensus       104 ~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dP~G~~iel~~~  147 (291)
                      +++++++.++|+++........++. ..+|++||+|+.||++..
T Consensus        69 ~~~~~~l~~~G~~~~~~~~~~~~~~-~~~~~~DPdG~~iEi~~~  111 (113)
T cd08345          69 DEYTERLKALGVEMKPERPRVQGEG-RSIYFYDPDGHLLELHAG  111 (113)
T ss_pred             HHHHHHHHHcCCccCCCccccCCCc-eEEEEECCCCCEEEEEeC
Confidence            9999999999999764433322233 358999999999999854

This family contains three types of fosfomycin resistant protein. Fosfomycin inhibits the enzyme UDP-N-acetylglucosamine-3-enolpyruvyltransferase (MurA), which catalyzes the first committed step in bacterial cell wall biosynthesis. The three types of fosfomycin resistance proteins, employ different mechanisms to render fosfomycin [(1R,2S)-epoxypropylphosphonic acid] inactive. FosB catalyzes the addition of L-cysteine to the epoxide ring of fosfomycin. FosX catalyzes the addition of a water molecule to the C1 position of the antibiotic with inversion of configuration at C1. FosA catalyzes the addition of glutathione to the antibiotic fosfomycin, making it inactive. Catalytic activities of both FosX and FosA are Mn(II)-dependent, but FosB is activated by Mg(II). Fosfomycin resistant proteins are evolutionarily related to glyoxalase I and type I extradiol dioxygenases.

>cd08362 BphC5-RrK37_N_like N-terminal, non-catalytic, domain of BphC5 (2,3-dihydroxybiphenyl 1,2-dioxygenase) from Rhodococcus rhodochrous K37, and similar proteins

Probab=99.59  E-value=2.7e-14  Score=105.31  Aligned_cols=113  Identities=26%  Similarity=0.317  Sum_probs=80.7

Q ss_pred             CCceeeeeeeCCchhhHHHHHHhcCCeeeeeccCcccceeeeeeccCCCCcceEEEEeEecCceeeccCceeeEEEEEec
Q 022831          152 EPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAISTD  231 (291)
Q Consensus       152 ~~~~hv~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~~hia~~v~  231 (291)
                      .+|.|+.|.|+|++++++||+++|||+......    .+  .++..++ .....+.+..       ...++.+|++|.++
T Consensus         2 ~~i~hv~l~v~d~~~s~~FY~~~lG~~~~~~~~----~~--~~~~~~~-~~~~~~~~~~-------~~~~~~~~~~~~v~   67 (120)
T cd08362           2 TALRGVGLGVPDLAAAAAFYREVWGLSVVAEDD----GI--VYLRATG-SEHHILRLRR-------SDRNRLDVVSFSVA   67 (120)
T ss_pred             ceeeEEEEecCCHHHHHHHHHhCcCcEEEEecC----CE--EEEECCC-CccEEEEecc-------CCCCCCceEEEEeC
Confidence            368999999999999999999999999764422    12  2333222 1233444422       11346789999994


Q ss_pred             ---ChHHHHHHHHHHHHhhCCeeeeccccc-CCCCceEEEEECCCCCeEEEEech
Q 022831          232 ---DVYKSAEVVNLVTQELGGKITRQPGPI-PGLNTKITSFVDPDGWKTVLVDNE  282 (291)
Q Consensus       232 ---di~~~~~~l~~~~~~~G~~~~~~p~~~-~~~~~~~~~~~DPdG~~iel~~~~  282 (291)
                         +++++++++    +++|+++..+|... ...+.+.++++||+||.|||+...
T Consensus        68 ~~~~l~~~~~~l----~~~G~~~~~~~~~~~~~~~~~~~~~~DP~G~~iel~~~~  118 (120)
T cd08362          68 SRADVDALARQV----AARGGTVLSEPGATDDPGGGYGFRFFDPDGRLIEFSADV  118 (120)
T ss_pred             CHHHHHHHHHHH----HHcCCceecCCcccCCCCCceEEEEECCCCCEEEEEecc
Confidence               678888888    99999998876432 222467889999999999998754

2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC) catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). The enzyme contains a N-terminal and a C-terminal domain of similar structure fold, resulting from an ancient gene duplication. BphC belongs to the type I extradiol dioxygenase family, which requires a metal in the active site for its catalytic activity. Polychlorinated biphenyl degrading bacteria demonstrate multiplicity of BphCs. Bacterium Rhodococcus rhodochrous K37 has eight genes encoding BphC enzymes. This family includes the N-terminal domain of BphC5-RrK37. The crystal structure of the protein from Novosphingobium aromaticivorans has a Mn(II)in the active site, although most proteins of type I extradiol dioxyge

>cd07235 MRD Mitomycin C resistance protein (MRD)

Probab=99.58  E-value=5.1e-14  Score=104.18  Aligned_cols=113  Identities=19%  Similarity=0.198  Sum_probs=76.6

Q ss_pred             eeeEEEEeCCHHHHHHHHHHhcCCEEEEEeccCCCceeeEEeeccCCCcceEEEeeecC-----CCCcccCCCCceEEEE
Q 022831           24 LLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNY-----GVTSYDIGTGFGHLAI   98 (291)
Q Consensus        24 i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~-----~~~~~~~g~~~~~i~~   98 (291)
                      ++||+|.|+|++++++||+. |||++......    ...+.+..+. +.  .+.+....     .......+.+..+++|
T Consensus         1 ~~~i~l~V~D~~~a~~FY~~-LGf~~~~~~~~----~~~~~~~~~~-~~--~l~l~~~~~~~~~~~~~~~~~~~~~~l~~   72 (122)
T cd07235           1 LDAVGIVVADMAKSLDFYRR-LGFDFPEEADD----EPHVEAVLPG-GV--RLAWDTVESIRSFTPGWTPTGGHRIALAF   72 (122)
T ss_pred             CceEEEEeccHHHHHHHHHH-hCceecCCcCC----CCcEEEEeCC-CE--EEEEEcccceeeecCCCCCCCCCcEEEEE
Confidence            58999999999999999975 99998543221    1123333321 22  22222110     0011112234567888


Q ss_pred             EEC---CHHHHHHHHHHcCCeeeeCCccCCCCceEEEEEECCCCcEEEEE
Q 022831           99 ATE---DVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFELI  145 (291)
Q Consensus        99 ~v~---d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dP~G~~iel~  145 (291)
                      .+.   |+++++++|+++|+++..+|...++|.+ .++++||+||.|+|+
T Consensus        73 ~~~~~~dvd~~~~~l~~~G~~~~~~~~~~~~g~~-~~~~~DPdG~~iel~  121 (122)
T cd07235          73 LCETPAEVDALYAELVGAGYPGHKEPWDAPWGQR-YAIVKDPDGNLVDLF  121 (122)
T ss_pred             EcCCHHHHHHHHHHHHHCCCCcCCCCccCCCCCE-EEEEECCCCCEEEEe
Confidence            775   8999999999999998888877777765 478999999999986

Mitomycin C (MC) is a naturally occurring antibiotic, and antitumor agent used in the treatment of cancer. Its antitumor activity is exerted primarily through monofunctional and bifunctional alkylation of DNA. MRD binds to MC and functions as a component of the MC exporting system. MC is bound to MRD by a stacking interaction between a His and a Trp. MRD adopts a structural fold similar to bleomycin resistance protein, glyoxalase I, and extradiol dioxygenases; and it has binding sites at an identical location to binding sites in these evolutionarily related enzymes.

>cd07262 Glo_EDI_BRP_like_19 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.58  E-value=7.5e-14  Score=103.45  Aligned_cols=114  Identities=23%  Similarity=0.251  Sum_probs=77.9

Q ss_pred             eeeEEEEeCCHHHHHHHHHHh---cCCEEEEEeccCCCceeeEEeeccCCCcceEEEeeecCCCCcccCCCCceEEEEEE
Q 022831           24 LLHAVYRVGDLDRTIKYYTEC---FGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHLAIAT  100 (291)
Q Consensus        24 i~hv~l~v~d~~~~~~FY~~~---lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~g~~~~~i~~~v  100 (291)
                      |+|++|.|+|++++++||+++   |||+...+.  .+ .  .+.+....  ....+.+......... ...+..|++|.|
T Consensus         1 l~hv~l~v~d~~~s~~FY~~~f~~lg~~~~~~~--~~-~--~~~~~~~~--~~~~~~l~~~~~~~~~-~~~~~~hi~f~v   72 (123)
T cd07262           1 IDHVTLGVNDLERARAFYDAVLAPLGIKRVMED--GP-G--AVGYGKGG--GGPDFWVTKPFDGEPA-TAGNGTHVAFAA   72 (123)
T ss_pred             CcEEEEecCcHHHHHHHHHHHHhhcCceEEeec--CC-c--eeEeccCC--CCceEEEeccccCCCC-CCCCceEEEEEC
Confidence            589999999999999999998   699886543  11 1  22233221  2233444433221111 122457999999


Q ss_pred             CC---HHHHHHHHHHcCCeeeeCCccCCC--CceEEEEEECCCCcEEEEE
Q 022831          101 ED---VYKMVENIRAKGGNVTREPGPLKG--MTTHFAFVKDPDGYIFELI  145 (291)
Q Consensus       101 ~d---~~~~~~~l~~~G~~~~~~~~~~~~--g~~~~~~~~dP~G~~iel~  145 (291)
                      +|   ++++++++.++|+++..+|...++  .....+|++||+|+.||++
T Consensus        73 ~~~~~v~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~DPdG~~ie~~  122 (123)
T cd07262          73 PSREAVDAFHAAALAAGGTDEGAPGLRPHYGPGYYAAYVRDPDGNKIEAV  122 (123)
T ss_pred             CCHHHHHHHHHHHHHcCCccCCCCCCCCCCCCCeEEEEEECCCCCEEEEe
Confidence            87   788999999999998877765553  2233578999999999986

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd08349 BLMA_like Bleomycin binding protein (BLMA) and similar proteins; BLMA confers bleomycin (Bm) resistance by directly binding to Bm

Probab=99.58  E-value=1.1e-13  Score=100.66  Aligned_cols=109  Identities=26%  Similarity=0.362  Sum_probs=78.5

Q ss_pred             EEEeCCHHHHHHHHHHhcCCEEEEEeccCCCceeeEEeeccCCCcceEEEeeecCCCCcccCCCCceEEEEEECCHHHHH
Q 022831           28 VYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHLAIATEDVYKMV  107 (291)
Q Consensus        28 ~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~g~~~~~i~~~v~d~~~~~  107 (291)
                      .|.|+|++++++||+++|||++.....  ..  ...++..+  +  ..+.+......... ...+..|++|.++|+++++
T Consensus         3 ~i~v~d~~~s~~FY~~~lg~~~~~~~~--~~--~~~~~~~~--~--~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~   73 (112)
T cd08349           3 VLPVSDIERSLAFYRDVLGFEVDWEHP--EP--GYAFLSRG--G--AQLMLSEHDGDEPV-PLGRGGSVYIEVEDVDALY   73 (112)
T ss_pred             EEEECCHHHHHHHHHhccCeEEEEEcC--CC--cEEEEEeC--C--EEEEEeccCCCCCC-CCCCcEEEEEEeCCHHHHH
Confidence            589999999999999999999876543  11  23444432  2  33444433222111 2345668999999999999


Q ss_pred             HHHHHcCCe-eeeCCccCCCCceEEEEEECCCCcEEEEEe
Q 022831          108 ENIRAKGGN-VTREPGPLKGMTTHFAFVKDPDGYIFELIQ  146 (291)
Q Consensus       108 ~~l~~~G~~-~~~~~~~~~~g~~~~~~~~dP~G~~iel~~  146 (291)
                      +++.++|++ +..++...++|.+ .++++||+|+.|+++|
T Consensus        74 ~~l~~~G~~~~~~~~~~~~~g~~-~~~~~DP~G~~ie~~~  112 (112)
T cd08349          74 AELKAKGADLIVYPPEDQPWGMR-EFAVRDPDGNLLRFGE  112 (112)
T ss_pred             HHHHHcCCcceecCccCCCcccE-EEEEECCCCCEEEecC
Confidence            999999998 5666666666644 4789999999999975

BLMA also called Bleomycin resistance protein, confers Bm resistance by directly binding to Bm. Bm is a glycopeptide antibiotic produced naturally by actinomycetes. It is a potent anti-cancer drug, which acts as a strong DNA-cutting agent, thereby causing cell death. BLMA is produced by actinomycetes to protect themselves against their own lethal compound. BLMA has two identically-folded subdomains, with the same alpha/beta fold; these two halves have no sequence similarity. BLMAs are dimers and each dimer binds to two Bm molecules at the Bm-binding pockets formed at the dimer interface; two Bm molecules are bound per dimer. BLMA belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. As for the large

>cd07267 THT_Oxygenase_N N-terminal domain of 2,4,5-trihydroxytoluene (THT) oxygenase

Probab=99.58  E-value=3.5e-14  Score=103.65  Aligned_cols=109  Identities=17%  Similarity=0.274  Sum_probs=77.6

Q ss_pred             CCceeeeeeeCCchhhHHHHHHhcCCeeeeeccCcccceeeeeeccCCCCcceEEEEeEecCceeeccCceeeEEEEEec
Q 022831          152 EPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAISTD  231 (291)
Q Consensus       152 ~~~~hv~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~~hia~~v~  231 (291)
                      .++.|+.|.|+|++++++||++ |||++..+.+  +   . .++..++. ....+.+..  +     ..+++.|++|.|+
T Consensus         2 ~~l~hv~l~v~Dl~~s~~FY~~-lGl~~~~~~~--~---~-~~~~~~~~-~~~~~~~~~--~-----~~~~~~~~af~v~   66 (113)
T cd07267           2 TDIAHVRFEHPDLDKAERFLTD-FGLEVAARTD--D---E-LYYRGYGT-DPFVYVARK--G-----EKARFVGAAFEAA   66 (113)
T ss_pred             cEEEEEEEccCCHHHHHHHHHH-cCCEEEEecC--C---e-EEEecCCC-ccEEEEccc--C-----CcCcccEEEEEEC
Confidence            3589999999999999999999 9999765521  1   1 23332211 222222211  0     1357889999999


Q ss_pred             ChHHHHHHHHHHHHhhCCeeeecccccCCCCceEEEEECCCCCeEEEEec
Q 022831          232 DVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDN  281 (291)
Q Consensus       232 di~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iel~~~  281 (291)
                      |.+++.+.+    ++.|..+...+. .++ +++++||+|||||.|||+..
T Consensus        67 ~~~~~~~~~----~~~g~~~~~~~~-~~~-~~~~~~~~DPdG~~iEl~~~  110 (113)
T cd07267          67 SRADLEKAA----ALPGASVIDDLE-APG-GGKRVTLTDPDGFPVELVYG  110 (113)
T ss_pred             CHHHHHHHH----HcCCCeeecCCC-CCC-CceEEEEECCCCCEEEEEec
Confidence            999998888    889998765443 333 46789999999999999864

This subfamily contains the N-terminal, non-catalytic, domain of THT oxygenase. THT oxygenase is an extradiol dioxygenase in the 2,4-dinitrotoluene (DNT) degradation pathway. It catalyzes the conversion of 2,4,5-trihydroxytoluene to an unstable ring fission product, 2,4-dihydroxy-5-methyl-6-oxo-2,4-hexadienoic acid. The native protein was determined to be a dimer by gel filtration. The enzyme belongs to the type I family of extradiol dioxygenases which contains two structurally homologous barrel-shaped domains at the N- and C-terminus of each monomer. The active-site metal is located in the C-terminal barrel. Fe(II) is required for its catalytic activity.

>cd08354 Glo_EDI_BRP_like_13 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.58  E-value=3.9e-14  Score=104.70  Aligned_cols=114  Identities=21%  Similarity=0.264  Sum_probs=78.7

Q ss_pred             ceeeeeeeCCchhhHHHHHHhcCCeeeeeccCcccceeeeeeccCCCCcceEEEEeEecCce------eeccCceeeEEE
Q 022831          154 LCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVT------EYTKGNAYAQVA  227 (291)
Q Consensus       154 ~~hv~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~------~~~~~~g~~hia  227 (291)
                      |.++.|.|+|++++++||+++|||++..+   +++.+  .++..++.   ..+.+.......      +.....+..|++
T Consensus         1 ~~~~~l~v~d~~~s~~Fy~~~lG~~~~~~---~~~~~--~~l~~~~~---~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~   72 (122)
T cd08354           1 ILETALYVDDLEAAEAFYEDVLGLELMLK---EDRRL--AFFWVGGR---GMLLLFDPGATSTPGGEIPPHGGSGPGHFA   72 (122)
T ss_pred             CeEEEEEeCCHHHHHHHHHhccCCEEeec---CCCce--EEEEcCCC---cEEEEEecCCcccccCCCCCCCCCCccEEE
Confidence            56899999999999999999999998764   12222  23333222   223333221110      111234788999


Q ss_pred             EEe--cChHHHHHHHHHHHHhhCCeeeecccccCCCCceEEEEECCCCCeEEEEec
Q 022831          228 IST--DDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDN  281 (291)
Q Consensus       228 ~~v--~di~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iel~~~  281 (291)
                      |.+  +|++++++++    .++|+++...+. .. .+++.+|++||||++||++++
T Consensus        73 ~~v~~~dl~~~~~~l----~~~g~~~~~~~~-~~-~~~~~~~~~DP~G~~ie~~~~  122 (122)
T cd08354          73 FAIPAEELAEWEAHL----EAKGVAIESEVQ-WP-RGGRSLYFRDPDGNLLELATP  122 (122)
T ss_pred             EEcCHHHHHHHHHHH----HhcCCceecccc-CC-CCeeEEEEECCCCCEEEEecC
Confidence            998  4799999999    999999876554 22 346789999999999999864

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>TIGR02295 HpaD 3,4-dihydroxyphenylacetate 2,3-dioxygenase

Probab=99.58  E-value=7.7e-14  Score=119.30  Aligned_cols=121  Identities=25%  Similarity=0.365  Sum_probs=85.4

Q ss_pred             CCccceeeEEEEeCCHHHHHHHHHHhcCCEEEEEeccCCCceeeEEeeccCCCcceEEEeeecCCCCcccCCCCceEEEE
Q 022831           19 KDKRRLLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHLAI   98 (291)
Q Consensus        19 ~~~~~i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~g~~~~~i~~   98 (291)
                      ..+++|+||+|.|+|++++++||+++|||++......+.+.....++.....  ...+.+...       .+++++|+||
T Consensus       132 ~~~~~i~Hv~l~v~dl~~a~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~-------~~~~~~Hiaf  202 (294)
T TIGR02295       132 VSPVRLDHFNVFVPDVQRALRFYKEELGFRVTEYTEDDEGNLAAAWLHRKGG--VHDIALTNG-------NGPRLHHIAY  202 (294)
T ss_pred             ccceeeeeEEEEeCCHHHHHHHHHHhcCCEEEEEeccCCCcEEEEEEecCCC--cCceEeecC-------CCCceeeEEE
Confidence            4679999999999999999999999999998765443333333444433221  112332211       2358899999


Q ss_pred             EECC---HHHHHHHHHHcCCe--eeeCCccCCCCceEEEEEECCCCcEEEEEecC
Q 022831           99 ATED---VYKMVENIRAKGGN--VTREPGPLKGMTTHFAFVKDPDGYIFELIQRG  148 (291)
Q Consensus        99 ~v~d---~~~~~~~l~~~G~~--~~~~~~~~~~g~~~~~~~~dP~G~~iel~~~~  148 (291)
                      .|+|   +++++++|+++|++  +...|.....+...++|++||+|+.||++...
T Consensus       203 ~v~d~~~v~~~~~~l~~~G~~~~~~~~p~~~~~~~~~~~y~~DP~G~~iEl~~~~  257 (294)
T TIGR02295       203 WVHDPLNIIKACDILASAGLSDSIERGPGRHGVSNAFFLYLRDPDGHRIELYTGD  257 (294)
T ss_pred             EcCCHHHHHHHHHHHHhCCCCcccccCCccCCCCcceEEEEECCCCCEEEEEecc
Confidence            9998   55668999999987  55455443333344689999999999998754

The enzyme from Bacillus brevis contains manganese.

>cd08349 BLMA_like Bleomycin binding protein (BLMA) and similar proteins; BLMA confers bleomycin (Bm) resistance by directly binding to Bm

Probab=99.58  E-value=5.3e-14  Score=102.31  Aligned_cols=109  Identities=25%  Similarity=0.267  Sum_probs=79.2

Q ss_pred             eeeeCCchhhHHHHHHhcCCeeeeeccCcccceeeeeeccCCCCcceEEEEeEecCceeeccCceeeEEEEEecChHHHH
Q 022831          158 MLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAISTDDVYKSA  237 (291)
Q Consensus       158 ~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~~hia~~v~di~~~~  237 (291)
                      .|.|+|++++.+||+++|||+......  +.  ...++..+    ...+.+....+.... ...+..|++|.++|++++.
T Consensus         3 ~i~v~d~~~s~~FY~~~lg~~~~~~~~--~~--~~~~~~~~----~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~   73 (112)
T cd08349           3 VLPVSDIERSLAFYRDVLGFEVDWEHP--EP--GYAFLSRG----GAQLMLSEHDGDEPV-PLGRGGSVYIEVEDVDALY   73 (112)
T ss_pred             EEEECCHHHHHHHHHhccCeEEEEEcC--CC--cEEEEEeC----CEEEEEeccCCCCCC-CCCCcEEEEEEeCCHHHHH
Confidence            588999999999999999999876542  11  22333322    245555443322111 2346679999999999999


Q ss_pred             HHHHHHHHhhCCe-eeecccccCCCCceEEEEECCCCCeEEEEe
Q 022831          238 EVVNLVTQELGGK-ITRQPGPIPGLNTKITSFVDPDGWKTVLVD  280 (291)
Q Consensus       238 ~~l~~~~~~~G~~-~~~~p~~~~~~~~~~~~~~DPdG~~iel~~  280 (291)
                      +++    +++|++ +..++...++ +.+.++++||+|+.|||+|
T Consensus        74 ~~l----~~~G~~~~~~~~~~~~~-g~~~~~~~DP~G~~ie~~~  112 (112)
T cd08349          74 AEL----KAKGADLIVYPPEDQPW-GMREFAVRDPDGNLLRFGE  112 (112)
T ss_pred             HHH----HHcCCcceecCccCCCc-ccEEEEEECCCCCEEEecC
Confidence            999    999999 5666665554 4588999999999999986

BLMA also called Bleomycin resistance protein, confers Bm resistance by directly binding to Bm. Bm is a glycopeptide antibiotic produced naturally by actinomycetes. It is a potent anti-cancer drug, which acts as a strong DNA-cutting agent, thereby causing cell death. BLMA is produced by actinomycetes to protect themselves against their own lethal compound. BLMA has two identically-folded subdomains, with the same alpha/beta fold; these two halves have no sequence similarity. BLMAs are dimers and each dimer binds to two Bm molecules at the Bm-binding pockets formed at the dimer interface; two Bm molecules are bound per dimer. BLMA belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. As for the large

>cd08345 Fosfomycin_RP Fosfomycin resistant protein; inhibits the biological function of fosfomycin

Probab=99.57  E-value=3.1e-14  Score=103.82  Aligned_cols=109  Identities=24%  Similarity=0.356  Sum_probs=75.6

Q ss_pred             eeeeeeCCchhhHHHHHHhcCCeeeeeccCcccceeeeeeccCCCCcceEEEEeEecCceeeccCceeeEEEEEec--Ch
Q 022831          156 QVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAISTD--DV  233 (291)
Q Consensus       156 hv~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~~hia~~v~--di  233 (291)
                      |+.|.|+|++++.+||+++|||+...+.+.  .    .++..+    ...+.+.......  ....+..|++|.|+  |+
T Consensus         1 Hv~l~v~d~~~s~~Fy~~~lg~~~~~~~~~--~----~~~~~~----~~~l~~~~~~~~~--~~~~~~~hiaf~v~~~d~   68 (113)
T cd08345           1 HITLIVKDLNKSIAFYRDILGAELIYSSSK--E----AYFELA----GLWICLMEEDSLQ--GPERTYTHIAFQIQSEEF   68 (113)
T ss_pred             CeeEEECCHHHHHHHHHHhcCCeeeeccCc--e----eEEEec----CeEEEeccCCCcC--CCCCCccEEEEEcCHHHH
Confidence            789999999999999999999998654321  1    112211    2344443322111  12346789999994  68


Q ss_pred             HHHHHHHHHHHHhhCCeeeecccccCCCCceEEEEECCCCCeEEEEec
Q 022831          234 YKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDN  281 (291)
Q Consensus       234 ~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iel~~~  281 (291)
                      +++++++    .++|+++...+..... +++.+|++|||||+|||+..
T Consensus        69 ~~~~~~l----~~~G~~~~~~~~~~~~-~~~~~~~~DPdG~~iEi~~~  111 (113)
T cd08345          69 DEYTERL----KALGVEMKPERPRVQG-EGRSIYFYDPDGHLLELHAG  111 (113)
T ss_pred             HHHHHHH----HHcCCccCCCccccCC-CceEEEEECCCCCEEEEEeC
Confidence            8888888    9999998654332222 35789999999999999863

This family contains three types of fosfomycin resistant protein. Fosfomycin inhibits the enzyme UDP-N-acetylglucosamine-3-enolpyruvyltransferase (MurA), which catalyzes the first committed step in bacterial cell wall biosynthesis. The three types of fosfomycin resistance proteins, employ different mechanisms to render fosfomycin [(1R,2S)-epoxypropylphosphonic acid] inactive. FosB catalyzes the addition of L-cysteine to the epoxide ring of fosfomycin. FosX catalyzes the addition of a water molecule to the C1 position of the antibiotic with inversion of configuration at C1. FosA catalyzes the addition of glutathione to the antibiotic fosfomycin, making it inactive. Catalytic activities of both FosX and FosA are Mn(II)-dependent, but FosB is activated by Mg(II). Fosfomycin resistant proteins are evolutionarily related to glyoxalase I and type I extradiol dioxygenases.

>cd07261 Glo_EDI_BRP_like_11 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.57  E-value=5.5e-14  Score=102.71  Aligned_cols=109  Identities=28%  Similarity=0.286  Sum_probs=77.6

Q ss_pred             eeeeeCCchhhHHHHHHhcCCeeeeeccCcccceeeeeeccCCCCcceEEEEeEecCcee-eccCceeeEEEEEecC---
Q 022831          157 VMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTE-YTKGNAYAQVAISTDD---  232 (291)
Q Consensus       157 v~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~-~~~~~g~~hia~~v~d---  232 (291)
                      +.|.|+|++++++||+++||+++....  +  .+..+...  +   ...+.+........ .....+.+|++|.|+|   
T Consensus         2 ~~l~v~d~~~a~~FY~~~lg~~~~~~~--~--~~~~~~~~--~---~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~~~~~   72 (114)
T cd07261           2 VLLYVEDPAASAEFYSELLGREPVELS--P--TFALFVLG--S---GVKLGLWSRHTVEPASDATGGGSELAFMVDDGAA   72 (114)
T ss_pred             EEEEECCHHHHHHHHHHHcCCCccCCC--C--ceEEEEeC--C---CcEEEEeeccccCCCCCCCCCceEEEEEcCCHHH
Confidence            678999999999999999999976532  1  23322222  1   23455544332211 1123467899999986   


Q ss_pred             hHHHHHHHHHHHHhhCCeeeecccccCCCCceEEEEECCCCCeEEEEe
Q 022831          233 VYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVD  280 (291)
Q Consensus       233 i~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iel~~  280 (291)
                      ++++++++    .++|+++..+|...+.  ++.++|+|||||.||++.
T Consensus        73 ~~~~~~~~----~~~g~~v~~~~~~~~~--g~~~~~~DPdGn~ie~~~  114 (114)
T cd07261          73 VDALYAEW----QAKGVKIIQEPTEMDF--GYTFVALDPDGHRLRVFA  114 (114)
T ss_pred             HHHHHHHH----HHCCCeEecCccccCC--ccEEEEECCCCCEEEeeC
Confidence            77777888    9999999988877665  467899999999999973

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd07262 Glo_EDI_BRP_like_19 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.57  E-value=6.1e-14  Score=103.95  Aligned_cols=114  Identities=23%  Similarity=0.217  Sum_probs=77.3

Q ss_pred             ceeeeeeeCCchhhHHHHHHh---cCCeeeeeccCcccceeeeeeccCCCCcceEEEEeEecCceeeccCceeeEEEEEe
Q 022831          154 LCQVMLRVGDLGRSIKFYEKA---LGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAIST  230 (291)
Q Consensus       154 ~~hv~l~v~D~~~~~~Fy~~~---lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~~hia~~v  230 (291)
                      +.|+.|.|+|++++++||+++   ||++.....  .+  ..+.+.. +.  ....+.+....+..+. ...+..|++|.|
T Consensus         1 l~hv~l~v~d~~~s~~FY~~~f~~lg~~~~~~~--~~--~~~~~~~-~~--~~~~~~l~~~~~~~~~-~~~~~~hi~f~v   72 (123)
T cd07262           1 IDHVTLGVNDLERARAFYDAVLAPLGIKRVMED--GP--GAVGYGK-GG--GGPDFWVTKPFDGEPA-TAGNGTHVAFAA   72 (123)
T ss_pred             CcEEEEecCcHHHHHHHHHHHHhhcCceEEeec--CC--ceeEecc-CC--CCceEEEeccccCCCC-CCCCceEEEEEC
Confidence            579999999999999999999   588876442  11  1222222 11  1244445433221111 123457999999


Q ss_pred             cC---hHHHHHHHHHHHHhhCCeeeecccccCC--CCceEEEEECCCCCeEEEE
Q 022831          231 DD---VYKSAEVVNLVTQELGGKITRQPGPIPG--LNTKITSFVDPDGWKTVLV  279 (291)
Q Consensus       231 ~d---i~~~~~~l~~~~~~~G~~~~~~p~~~~~--~~~~~~~~~DPdG~~iel~  279 (291)
                      +|   ++++.+++    .++|+.+..+|...+.  .+.+.+||+|||||.|||+
T Consensus        73 ~~~~~v~~~~~~~----~~~g~~~~~~~~~~~~~~~~~~~~~~~DPdG~~ie~~  122 (123)
T cd07262          73 PSREAVDAFHAAA----LAAGGTDEGAPGLRPHYGPGYYAAYVRDPDGNKIEAV  122 (123)
T ss_pred             CCHHHHHHHHHHH----HHcCCccCCCCCCCCCCCCCeEEEEEECCCCCEEEEe
Confidence            87   66677777    9999998888766553  2345689999999999997

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd08354 Glo_EDI_BRP_like_13 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.57  E-value=1.3e-13  Score=101.91  Aligned_cols=113  Identities=27%  Similarity=0.409  Sum_probs=78.7

Q ss_pred             eeeEEEEeCCHHHHHHHHHHhcCCEEEEEeccCCCceeeEEeeccCCCcceEEEeeecCCCC------cccCCCCceEEE
Q 022831           24 LLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVT------SYDIGTGFGHLA   97 (291)
Q Consensus        24 i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~------~~~~g~~~~~i~   97 (291)
                      |.|+.|.|+|++++++||+++|||++..+   +++.  ..++..++.   ..+.+.......      ......+..|++
T Consensus         1 ~~~~~l~v~d~~~s~~Fy~~~lG~~~~~~---~~~~--~~~l~~~~~---~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~   72 (122)
T cd08354           1 ILETALYVDDLEAAEAFYEDVLGLELMLK---EDRR--LAFFWVGGR---GMLLLFDPGATSTPGGEIPPHGGSGPGHFA   72 (122)
T ss_pred             CeEEEEEeCCHHHHHHHHHhccCCEEeec---CCCc--eEEEEcCCC---cEEEEEecCCcccccCCCCCCCCCCccEEE
Confidence            56899999999999999999999998764   1222  345554432   223333221111      111234678999


Q ss_pred             EEE--CCHHHHHHHHHHcCCeeeeCCccCCCCceEEEEEECCCCcEEEEEe
Q 022831           98 IAT--EDVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFELIQ  146 (291)
Q Consensus        98 ~~v--~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dP~G~~iel~~  146 (291)
                      |.+  +|++++++++.++|+++...+. ..++.. .++++||+|+.||+++
T Consensus        73 ~~v~~~dl~~~~~~l~~~g~~~~~~~~-~~~~~~-~~~~~DP~G~~ie~~~  121 (122)
T cd08354          73 FAIPAEELAEWEAHLEAKGVAIESEVQ-WPRGGR-SLYFRDPDGNLLELAT  121 (122)
T ss_pred             EEcCHHHHHHHHHHHHhcCCceecccc-CCCCee-EEEEECCCCCEEEEec
Confidence            999  5799999999999998765543 233434 4889999999999985

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>KOG2944 consensus Glyoxalase [Carbohydrate transport and metabolism]

Probab=99.57  E-value=1.2e-14  Score=106.62  Aligned_cols=119  Identities=21%  Similarity=0.310  Sum_probs=75.1

Q ss_pred             CceeeeeeeCCchhhHHHHHHhcCCeeeeeccCcccceeeeeeccCCCCcceEEEEeEecCcee-----ecc----Ccee
Q 022831          153 PLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTE-----YTK----GNAY  223 (291)
Q Consensus       153 ~~~hv~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~-----~~~----~~g~  223 (291)
                      ++.+..|.+++.-+...||...||++..+..+.+......+...     ....++|..+++...     +..    +.|.
T Consensus        42 r~~gm~l~~~~~fke~~Fsl~fL~~~~~~~vP~~~~~~~v~~~~-----~~~~~ELthn~Gtes~~~~~~~ngN~~prGf  116 (170)
T KOG2944|consen   42 RVNGMALLVPDDFKEAKFSLYFLGAEVSEDVPKPEHGVSVFVFS-----RNAKLELTHNWGTESPPDQAYLNGNKEPRGF  116 (170)
T ss_pred             hhccceeechhhhhHhhhHHHhhcccccccCccCCCCCceEEec-----ccCceeeecCCCCCCCcchhhcCCCCCCCcc
Confidence            34455555555555555555555555444333222111111111     135677877776642     111    2389


Q ss_pred             eEEEEEecChHHHHHHHHHHHHhhCCeeeecccccCCCCceEEEEECCCCCeEEEEech
Q 022831          224 AQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNE  282 (291)
Q Consensus       224 ~hia~~v~di~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~  282 (291)
                      +||+|.|+|+++++.++    ++.|+++...|...-.  ..++|+.||||++|||....
T Consensus       117 gHIci~V~di~sac~~l----kekGV~f~Kk~~dGk~--K~iaF~~dpDgywiei~~~s  169 (170)
T KOG2944|consen  117 GHICIEVDDINSACERL----KEKGVRFKKKLKDGKM--KPIAFLHDPDGYWIEIELES  169 (170)
T ss_pred             ceEEEEeCCHHHHHHHH----HHhCceeeecCCCccc--cceeEEECCCCCeEEEeecC
Confidence            99999999999999999    9999997776543221  35799999999999998653

>KOG2943 consensus Predicted glyoxalase [Carbohydrate transport and metabolism]

Probab=99.56  E-value=1.8e-14  Score=112.77  Aligned_cols=128  Identities=37%  Similarity=0.634  Sum_probs=108.4

Q ss_pred             CCCCceeeeeeeCCchhhHHHHHHhcCCeeeeeccCcc-----------cceeeeeeccCCCCcceEEEEeEecCceeec
Q 022831          150 TPEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPE-----------LKCALAMLGYAEEDQTTVLELAYSYGVTEYT  218 (291)
Q Consensus       150 ~~~~~~hv~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~  218 (291)
                      ...+.-|+++.|.|.+++++||+++|||++.+..+.++           +++.-.|+++++++.|+.+||+.+++...|.
T Consensus        14 ~~~r~LH~VfkVgdr~kti~Fyt~vlgMkvLRheef~egc~aacngpyd~kwSktmvGyGpEdshFViELTYNYgV~~Ye   93 (299)
T KOG2943|consen   14 DTRRALHYVFKVGDRAKTIDFYTEVLGMKVLRHEEFEEGCEAACNGPYDGKWSKTMVGYGPEDSHFVIELTYNYGVSKYE   93 (299)
T ss_pred             cchheeeEeEeecchHHHHHHHHHhhcceeeehhhhhhhhhhhcCCCcccchhhhheecCCCcccEEEEEEeccCcccee
Confidence            34678999999999999999999999999988765554           5677788999999999999999999999999


Q ss_pred             cCceeeEEEEEecChHHHHHHHHHHHHhhCCeeeecccccCCCCceEEEEECCCCCeEEEEechhhhhhhhc
Q 022831          219 KGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNEDFLKELQS  290 (291)
Q Consensus       219 ~~~g~~hia~~v~di~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~~~~~~~~~  290 (291)
                      .|+++.|+.+.++|+-+.++.+    ..-|.+         +++...+++.||||+.|+|+++.|...++|+
T Consensus        94 lGndfg~i~I~s~dv~~~ve~v----~~p~~~---------~~g~~~~~v~dPdGykF~l~~~~p~s~pv~~  152 (299)
T KOG2943|consen   94 LGNDFGGITIASDDVFSKVEKV----NAPGGK---------GSGCGIAFVKDPDGYKFYLIDRGPQSDPVLQ  152 (299)
T ss_pred             ccCCcccEEEeHHHHHHHHHHh----cCcCCc---------ccceEEEEEECCCCcEEEEeccCCCCCCeEE
Confidence            9999999999998888887777    544432         2235578899999999999998888877764

>cd07254 Glo_EDI_BRP_like_20 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.56  E-value=1.2e-13  Score=101.89  Aligned_cols=112  Identities=21%  Similarity=0.244  Sum_probs=77.7

Q ss_pred             eeeeeeeCCchhhHHHHHHhcCCeeeeeccCcccceeeeeeccCCCCcceEEEEeEecCceeeccCceeeEEEEEecC--
Q 022831          155 CQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAISTDD--  232 (291)
Q Consensus       155 ~hv~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~~hia~~v~d--  232 (291)
                      .|+.|.|+|++++.+||+++||++.....+  +  +..+...  .  ....+.+......    ..++..|++|.|+|  
T Consensus         3 ~hv~l~v~d~~~a~~FY~~~lG~~~~~~~~--~--~~~~~~~--~--~~~~~~~~~~~~~----~~~~~~h~~f~v~~~~   70 (120)
T cd07254           3 FHVALNVDDLEASIAFYSKLFGVEPTKVRD--D--YAKFLLE--D--PRLNFVLNERPGA----PGGGLNHLGVQVDSAE   70 (120)
T ss_pred             EEEEEEeCCHHHHHHHHHHHhCCeEecccC--C--eeEEEec--C--CceEEEEecCCCC----CCCCeeEEEEEeCCHH
Confidence            589999999999999999999998755421  1  2222222  1  1233333321111    12588999999988  


Q ss_pred             -hHHHHHHHHHHHHhhCCeeeecccccC-CCCceEEEEECCCCCeEEEEech
Q 022831          233 -VYKSAEVVNLVTQELGGKITRQPGPIP-GLNTKITSFVDPDGWKTVLVDNE  282 (291)
Q Consensus       233 -i~~~~~~l~~~~~~~G~~~~~~p~~~~-~~~~~~~~~~DPdG~~iel~~~~  282 (291)
                       ++++++++    .++|+++..+|.... +...+.+|++||+||.|||+.+.
T Consensus        71 dl~~~~~~l----~~~G~~~~~~~~~~~~~~~~~~~~~~DP~G~~ie~~~~~  118 (120)
T cd07254          71 EVAEAKARA----EAAGLPTFKEEDTTCCYAVQDKVWVTDPDGNAWEVFVTL  118 (120)
T ss_pred             HHHHHHHHH----HHcCCeEEccCCcccccCCcceEEEECCCCCEEEEEEee
Confidence             67777777    999999887765432 22356799999999999999853

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and types I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>COG3324 Predicted enzyme related to lactoylglutathione lyase [General function prediction only]

Probab=99.56  E-value=9.2e-14  Score=100.76  Aligned_cols=120  Identities=27%  Similarity=0.335  Sum_probs=89.0

Q ss_pred             CCCceeeeeeeCCchhhHHHHHHhcCCeeeeeccCcccceeeeeeccCCCCcceEEEEeEecCceeeccCceeeEEEEEe
Q 022831          151 PEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAIST  230 (291)
Q Consensus       151 ~~~~~hv~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~~hia~~v  230 (291)
                      +..+.|..|.+.|++++.+||.++|||......+..+..|......  .......+.  ...   ....+++.+++.|.|
T Consensus         7 ~~~i~w~Ei~~~D~~ra~~FY~~vFgW~~~~~~~~~~~~y~~f~~~--~~~~gG~l~--~~~---~~~p~~~~~~iy~~v   79 (127)
T COG3324           7 KGTIVWFELPVSDLERAKAFYEKVFGWTFEDYFDMGEMRYAVFPAD--GAGAGGGLM--ARP---GSPPGGGGWVIYFAV   79 (127)
T ss_pred             CCccEEEeeecCCHHHHHHHHHHhhCceecccccCCCceEEEEECC--Cccccceec--cCC---cCCCCCCCEEEEEec
Confidence            5678999999999999999999999999877644333333333222  211112221  111   112235668899999


Q ss_pred             cChHHHHHHHHHHHHhhCCeeeecccccCCCCceEEEEECCCCCeEEEEech
Q 022831          231 DDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNE  282 (291)
Q Consensus       231 ~di~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~  282 (291)
                      +|+++..+++    .++|++++.++...|+ .++++.+.||.||+|-|.+..
T Consensus        80 ~did~~l~rv----~~~GG~V~~p~~~~p~-~G~~a~~~Dp~Gn~~~l~s~~  126 (127)
T COG3324          80 DDIDATLERV----VAAGGKVLRPKTEFPG-GGRIAHFVDPEGNRFGLWSPA  126 (127)
T ss_pred             CChHHHHHHH----HhcCCeEEecccccCC-ceEEEEEECCCCCEEEEeecC
Confidence            9999999999    9999999999998886 479999999999999998754

>cd06587 Glo_EDI_BRP_like This domain superfamily is found in a variety of structurally related metalloproteins, including the type I extradiol dioxygenases, glyoxalase I and a group of antibiotic resistance proteins

Probab=99.56  E-value=1.5e-13  Score=99.04  Aligned_cols=112  Identities=31%  Similarity=0.413  Sum_probs=82.0

Q ss_pred             eEEEEeCCHHHHHHHHHHhcCCEEEEEeccCCCceeeEEeeccCCCcceEEEeeecCCCCcccCCCCceEEEEEECCHHH
Q 022831           26 HAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHLAIATEDVYK  105 (291)
Q Consensus        26 hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~g~~~~~i~~~v~d~~~  105 (291)
                      |+.|.|+|++++.+||+++|||++......  ......++..+    ...+.+...........+.+..|++|.|+|+++
T Consensus         1 Hi~i~~~d~~~~~~fy~~~lg~~~~~~~~~--~~~~~~~~~~~----~~~i~l~~~~~~~~~~~~~~~~~~~~~v~~~~~   74 (112)
T cd06587           1 HVGLTVSDLEAAVAFYEEVLGFEVLFRNGN--GGAEFAVLGLG----GTRLELFEGDEPAPAPSGGGGVHLAFEVDDVDA   74 (112)
T ss_pred             CcceeeCCHHHHHHHHHhccCCEEEEeecc--CCEEEEEEecC----CceEEEecCCCCCCcccCCCeeEEEEECCCHHH
Confidence            899999999999999999999999876532  12234555433    244555554332222345578899999999999


Q ss_pred             HHHHHHHcCCeeeeCCccCCCCceEEEEEECCCCcEEEE
Q 022831          106 MVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFEL  144 (291)
Q Consensus       106 ~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dP~G~~iel  144 (291)
                      ++++|.++|+.+...+....++. ..+++.||+|+.|+|
T Consensus        75 ~~~~l~~~g~~~~~~~~~~~~~~-~~~~~~Dp~G~~~~~  112 (112)
T cd06587          75 AYERLKAAGVEVLGEPREEPWGG-RVAYFRDPDGNLIEL  112 (112)
T ss_pred             HHHHHHHcCCcccCCCcCCCCCc-EEEEEECCCCcEEeC
Confidence            99999999999877664233333 358899999999985

This domain superfamily is found in a variety of structurally related metalloproteins, including the type I extradiol dioxygenases, glyoxalase I and a group of antibiotic resistance proteins. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). Type I extradiol dioxygenases catalyze the incorporation of both atoms of molecular oxygen into aromatic substrates, which results in the cleavage of aromatic rings. They are key enzymes in the degradation of aromatic compounds. Type I extradiol dioxygenases include class I and class II enzymes. Class I and II enzymes show sequence similarity; the two-domain clas

>cd08344 MhqB_like_N N-terminal domain of MhqB, a type I extradiol dioxygenase, and similar proteins

Probab=99.56  E-value=1.7e-13  Score=99.84  Aligned_cols=108  Identities=18%  Similarity=0.288  Sum_probs=73.3

Q ss_pred             cceeeEEEEeCCHHHHHHHHHHhcCCEEEEEeccCCCceeeEEeeccCCCcceEEEeeecCCCCcccCCCCceEE--EEE
Q 022831           22 RRLLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHL--AIA   99 (291)
Q Consensus        22 ~~i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~g~~~~~i--~~~   99 (291)
                      ++|+||.|.|+|++++++||+ +|||++..+.   + .  ..+...+  .....+.+....       +.+..++  .+.
T Consensus         1 ~~i~hv~l~v~d~~~s~~FY~-~lG~~~~~~~---~-~--~~~~~~~--~~~~~~~~~~~~-------~~~~~~~~~~~~   64 (112)
T cd08344           1 HSIDHFALEVPDLEVARRFYE-AFGLDVREEG---D-G--LELRTAG--NDHRWARLLEGA-------RKRLAYLSFGIF   64 (112)
T ss_pred             CceeEEEEecCCHHHHHHHHH-HhCCcEEeec---C-c--eEEEecC--CCceEEEeecCC-------CCceeeEEEEeE
Confidence            479999999999999999997 6999986542   1 1  2222222  122333333221       1234444  455


Q ss_pred             ECCHHHHHHHHHHcCCeeeeCCccCCCCceEEEEEECCCCcEEEEEecC
Q 022831          100 TEDVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFELIQRG  148 (291)
Q Consensus       100 v~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dP~G~~iel~~~~  148 (291)
                      ++|+++++++|.++|+++...+  ..++.+ .+||.||+||.|||....
T Consensus        65 ~~d~~~~~~~l~~~Gi~~~~~~--~~~~~~-~~~~~DP~Gn~iel~~~~  110 (112)
T cd08344          65 EDDFAAFARHLEAAGVALAAAP--PGADPD-GVWFRDPDGNLLQVKVAE  110 (112)
T ss_pred             hhhHHHHHHHHHHcCCceecCC--CcCCCC-EEEEECCCCCEEEEecCC
Confidence            5899999999999999987654  333333 378999999999998654

This subfamily contains the N-terminal, non-catalytic, domain of Burkholderia sp. NF100 MhqB and similar proteins. MhqB is a type I extradiol dioxygenase involved in the catabolism of methylhydroquinone, an intermediate in the degradation of fenitrothion. The purified enzyme has shown extradiol ring cleavage activity toward 3-methylcatechol. Fe2+ was suggested as a cofactor, the same as most other enzymes in the family. Burkholderia sp. NF100 MhqB is encoded on the plasmid pNF1. The type I family of extradiol dioxygenases contains two structurally homologous barrel-shaped domains at the N- and C-terminal. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism.

>cd07244 FosA FosA, a Fosfomycin resistance protein, catalyzes the addition of glutathione to the antibiotic fosfomycin, making it inactive

Probab=99.56  E-value=7.5e-14  Score=103.22  Aligned_cols=109  Identities=29%  Similarity=0.342  Sum_probs=77.1

Q ss_pred             CceeeeeeeCCchhhHHHHHHhcCCeeeeeccCcccceeeeeeccCCCCcceEEEEeEecCceeeccCceeeEEEEEe--
Q 022831          153 PLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAIST--  230 (291)
Q Consensus       153 ~~~hv~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~~hia~~v--  230 (291)
                      ++.|+.|.|+|++++.+||+++|||++....+  +.    .++..+    ...+.+......   +..++..|++|.+  
T Consensus         1 ~i~hv~l~v~d~~~~~~FY~~vLG~~~~~~~~--~~----~~~~~~----~~~~~l~~~~~~---~~~~~~~hi~f~v~~   67 (121)
T cd07244           1 GINHITLAVSDLERSVAFYVDLLGFKLHVRWD--KG----AYLEAG----DLWLCLSVDANV---GPAKDYTHYAFSVSE   67 (121)
T ss_pred             CcceEEEEECCHHHHHHHHHHhcCCEEEEecC--Cc----eEEecC----CEEEEEecCCCC---CCCCCeeeEEEEeCH
Confidence            47899999999999999999999999765432  11    122222    122333221111   1245778999988  


Q ss_pred             cChHHHHHHHHHHHHhhCCeeeecccccCCCCceEEEEECCCCCeEEEEech
Q 022831          231 DDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNE  282 (291)
Q Consensus       231 ~di~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~  282 (291)
                      +|++++++++    +++|+++..++.. +   ++.+||+|||||.|||+...
T Consensus        68 ~dl~~~~~~l----~~~G~~~~~~~~~-~---~~~~~f~DPdG~~ie~~~~~  111 (121)
T cd07244          68 EDFASLKEKL----RQAGVKEWKENTS-E---GDSFYFLDPDGHKLELHVGS  111 (121)
T ss_pred             HHHHHHHHHH----HHcCCcccCCCCC-C---ccEEEEECCCCCEEEEEeCC
Confidence            5788889999    9999998665432 2   46899999999999999743

This subfamily family contains FosA, a fosfomycin resistant protein. Fosfomycin inhibits the enzyme UDP-N-acetylglucosamine-3-enolpyruvyltransferase (MurA), which catalyzes the first committed step in bacterial cell wall biosynthesis. FosA, catalyzes the addition of glutathione to the antibiotic fosfomycin, (1R,2S)-epoxypropylphosphonic acid, making it inactive. FosA is a Mn(II) dependent enzyme. It is evolutionarily related to glyoxalase I and type I extradiol dioxygenases.

>COG3324 Predicted enzyme related to lactoylglutathione lyase [General function prediction only]

Probab=99.55  E-value=4.2e-13  Score=97.35  Aligned_cols=121  Identities=22%  Similarity=0.268  Sum_probs=87.5

Q ss_pred             CCccceeeEEEEeCCHHHHHHHHHHhcCCEEEEEeccCCCceeeEEeeccC-CCcceEEEeeecCCCCcccCCCCceEEE
Q 022831           19 KDKRRLLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGP-EQSYFVVELTYNYGVTSYDIGTGFGHLA   97 (291)
Q Consensus        19 ~~~~~i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~l~~~~~~~~~~~g~~~~~i~   97 (291)
                      ++...+.|..|.|+|++++++||+++|||+.....+..  ......+..+. ..... +.     .......+.+...+.
T Consensus         5 ~~~~~i~w~Ei~~~D~~ra~~FY~~vFgW~~~~~~~~~--~~~y~~f~~~~~~~gG~-l~-----~~~~~~p~~~~~~iy   76 (127)
T COG3324           5 GEKGTIVWFELPVSDLERAKAFYEKVFGWTFEDYFDMG--EMRYAVFPADGAGAGGG-LM-----ARPGSPPGGGGWVIY   76 (127)
T ss_pred             ccCCccEEEeeecCCHHHHHHHHHHhhCceecccccCC--CceEEEEECCCccccce-ec-----cCCcCCCCCCCEEEE
Confidence            45667899999999999999999999999997654332  22333333222 11111 11     111122223556789


Q ss_pred             EEECCHHHHHHHHHHcCCeeeeCCccCCCCceEEEEEECCCCcEEEEEecC
Q 022831           98 IATEDVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFELIQRG  148 (291)
Q Consensus        98 ~~v~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dP~G~~iel~~~~  148 (291)
                      |.|+|+++..+|.+++|.+++.++.+.+++.+ ++.+.||+||+|.|++..
T Consensus        77 ~~v~did~~l~rv~~~GG~V~~p~~~~p~~G~-~a~~~Dp~Gn~~~l~s~~  126 (127)
T COG3324          77 FAVDDIDATLERVVAAGGKVLRPKTEFPGGGR-IAHFVDPEGNRFGLWSPA  126 (127)
T ss_pred             EecCChHHHHHHHHhcCCeEEecccccCCceE-EEEEECCCCCEEEEeecC
Confidence            99999999999999999999999999986545 488999999999998653

>KOG2944 consensus Glyoxalase [Carbohydrate transport and metabolism]

Probab=99.55  E-value=4.5e-14  Score=103.68  Aligned_cols=124  Identities=34%  Similarity=0.531  Sum_probs=84.3

Q ss_pred             ccceeeEEEEeCCHHHHHHHHHHhcCCEEEEEeccCCCceeeEEeecc--------CC-------CcceEEEeeecCCCC
Q 022831           21 KRRLLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFG--------PE-------QSYFVVELTYNYGVT   85 (291)
Q Consensus        21 ~~~i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~--------~~-------~~~~~l~l~~~~~~~   85 (291)
                      -..+.|..+.+.|+.++..||++++|+.+..+...++..+...+++..        .+       .....+++.++.+..
T Consensus        20 t~~~~~t~~rvkd~~~Sl~fytr~~gm~l~~~~~fke~~Fsl~fL~~~~~~~vP~~~~~~~v~~~~~~~~~ELthn~Gte   99 (170)
T KOG2944|consen   20 TYLLQQTMLRVKDPTGSLKFYTRVNGMALLVPDDFKEAKFSLYFLGAEVSEDVPKPEHGVSVFVFSRNAKLELTHNWGTE   99 (170)
T ss_pred             hhhhhhceeecccchhhhhhhhhhccceeechhhhhHhhhHHHhhcccccccCccCCCCCceEEecccCceeeecCCCCC
Confidence            355689999999999999999999998887654433322222222210        00       112235666654422


Q ss_pred             -----ccc----CCCCceEEEEEECCHHHHHHHHHHcCCeeeeCCccCCCCce-EEEEEECCCCcEEEEEec
Q 022831           86 -----SYD----IGTGFGHLAIATEDVYKMVENIRAKGGNVTREPGPLKGMTT-HFAFVKDPDGYIFELIQR  147 (291)
Q Consensus        86 -----~~~----~g~~~~~i~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~g~~-~~~~~~dP~G~~iel~~~  147 (291)
                           .+.    .+.|++||||.|+|+++++++|++.|++....+   .+|.. ..+|+.||||++|||...
T Consensus       100 s~~~~~~~ngN~~prGfgHIci~V~di~sac~~lkekGV~f~Kk~---~dGk~K~iaF~~dpDgywiei~~~  168 (170)
T KOG2944|consen  100 SPPDQAYLNGNKEPRGFGHICIEVDDINSACERLKEKGVRFKKKL---KDGKMKPIAFLHDPDGYWIEIELE  168 (170)
T ss_pred             CCcchhhcCCCCCCCccceEEEEeCCHHHHHHHHHHhCceeeecC---CCccccceeEEECCCCCeEEEeec
Confidence                 121    335999999999999999999999999965433   34433 579999999999999754

>cd09012 Glo_EDI_BRP_like_24 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.54  E-value=8.8e-14  Score=103.28  Aligned_cols=113  Identities=24%  Similarity=0.251  Sum_probs=76.2

Q ss_pred             ceeeeeeeCCchhhHHHHHHhcCCeeeeeccCcccceeeeeeccCCCCcceEEEEeEecCc-----eee--ccCceeeEE
Q 022831          154 LCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGV-----TEY--TKGNAYAQV  226 (291)
Q Consensus       154 ~~hv~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~-----~~~--~~~~g~~hi  226 (291)
                      +.++.|.|+|++++.+||++ |||+.......+.  ...+..+  +   ...+.+......     ...  +...+..|+
T Consensus         1 ~~~v~l~V~Dl~~s~~FY~~-lGf~~~~~~~~~~--~~~~~~~--~---~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~l   72 (124)
T cd09012           1 MIFINLPVKDLEKSTAFYTA-LGFEFNPQFSDEK--AACMVIS--D---NIFVMLLTEDFFQTFTPKPIADTKKSTEVLI   72 (124)
T ss_pred             CEEEEeecCCHHHHHHHHHH-CCCEEccccCCCC--eEEEEEC--C---ceEEEEEcHHHHhhccCCCcccCCCCCeEEE
Confidence            36789999999999999976 8999764332222  1111122  1   234444332110     000  123456799


Q ss_pred             EEEec---ChHHHHHHHHHHHHhhCCeeeecccccCCCCceEEEEECCCCCeEEEEe
Q 022831          227 AISTD---DVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVD  280 (291)
Q Consensus       227 a~~v~---di~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iel~~  280 (291)
                      +|.|+   |++++++++    +++|+++..+|...++  .+.+||+|||||+|||+.
T Consensus        73 ~f~v~~~~~vd~~~~~l----~~~G~~i~~~p~~~~~--~~~~~~~DPdG~~ie~~~  123 (124)
T cd09012          73 SLSADSREEVDELVEKA----LAAGGKEFREPQDHGF--MYGRSFADLDGHLWEVLW  123 (124)
T ss_pred             EEeCCCHHHHHHHHHHH----HHCCCcccCCcccCCc--eEEEEEECCCCCEEEEEE
Confidence            99998   577888888    9999999888776654  567899999999999984

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd09012 Glo_EDI_BRP_like_24 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.54  E-value=1.2e-13  Score=102.50  Aligned_cols=113  Identities=21%  Similarity=0.241  Sum_probs=76.4

Q ss_pred             eeeEEEEeCCHHHHHHHHHHhcCCEEEEEeccCCCceeeEEeeccCCCcceEEEeeecCCC------Ccc-cCCCCceEE
Q 022831           24 LLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGV------TSY-DIGTGFGHL   96 (291)
Q Consensus        24 i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~------~~~-~~g~~~~~i   96 (291)
                      +.+++|.|+|++++++||+. |||++......+.    ..++..++   ...+.+......      ... ..+.+..|+
T Consensus         1 ~~~v~l~V~Dl~~s~~FY~~-lGf~~~~~~~~~~----~~~~~~~~---~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~l   72 (124)
T cd09012           1 MIFINLPVKDLEKSTAFYTA-LGFEFNPQFSDEK----AACMVISD---NIFVMLLTEDFFQTFTPKPIADTKKSTEVLI   72 (124)
T ss_pred             CEEEEeecCCHHHHHHHHHH-CCCEEccccCCCC----eEEEEECC---ceEEEEEcHHHHhhccCCCcccCCCCCeEEE
Confidence            36899999999999999987 9999864322211    22333221   233444332110      000 122345689


Q ss_pred             EEEEC---CHHHHHHHHHHcCCeeeeCCccCCCCceEEEEEECCCCcEEEEEe
Q 022831           97 AIATE---DVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFELIQ  146 (291)
Q Consensus        97 ~~~v~---d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dP~G~~iel~~  146 (291)
                      +|.|+   |+++++++++++|+++..+|...+++ + .+|++|||||.||++.
T Consensus        73 ~f~v~~~~~vd~~~~~l~~~G~~i~~~p~~~~~~-~-~~~~~DPdG~~ie~~~  123 (124)
T cd09012          73 SLSADSREEVDELVEKALAAGGKEFREPQDHGFM-Y-GRSFADLDGHLWEVLW  123 (124)
T ss_pred             EEeCCCHHHHHHHHHHHHHCCCcccCCcccCCce-E-EEEEECCCCCEEEEEE
Confidence            99998   58899999999999998877666653 3 4789999999999974

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd07254 Glo_EDI_BRP_like_20 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.54  E-value=2.9e-13  Score=99.81  Aligned_cols=112  Identities=27%  Similarity=0.446  Sum_probs=77.4

Q ss_pred             eeEEEEeCCHHHHHHHHHHhcCCEEEEEeccCCCceeeEEeeccCCCcceEEEeeecCCCCcccCCCCceEEEEEECC--
Q 022831           25 LHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHLAIATED--  102 (291)
Q Consensus        25 ~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~g~~~~~i~~~v~d--  102 (291)
                      .|+.|.|+|++++.+||+++|||+......   + + ..|. ...  ..+.+.+......    ...+..|++|.|+|  
T Consensus         3 ~hv~l~v~d~~~a~~FY~~~lG~~~~~~~~---~-~-~~~~-~~~--~~~~~~~~~~~~~----~~~~~~h~~f~v~~~~   70 (120)
T cd07254           3 FHVALNVDDLEASIAFYSKLFGVEPTKVRD---D-Y-AKFL-LED--PRLNFVLNERPGA----PGGGLNHLGVQVDSAE   70 (120)
T ss_pred             EEEEEEeCCHHHHHHHHHHHhCCeEecccC---C-e-eEEE-ecC--CceEEEEecCCCC----CCCCeeEEEEEeCCHH
Confidence            599999999999999999999998865421   1 1 2222 222  2333333322111    11477899999987  


Q ss_pred             -HHHHHHHHHHcCCeeeeCCccCCC-CceEEEEEECCCCcEEEEEecC
Q 022831          103 -VYKMVENIRAKGGNVTREPGPLKG-MTTHFAFVKDPDGYIFELIQRG  148 (291)
Q Consensus       103 -~~~~~~~l~~~G~~~~~~~~~~~~-g~~~~~~~~dP~G~~iel~~~~  148 (291)
                       +++++++|.++|+++...+....+ +....+|++||+|+.|||+...
T Consensus        71 dl~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~DP~G~~ie~~~~~  118 (120)
T cd07254          71 EVAEAKARAEAAGLPTFKEEDTTCCYAVQDKVWVTDPDGNAWEVFVTL  118 (120)
T ss_pred             HHHHHHHHHHHcCCeEEccCCcccccCCcceEEEECCCCCEEEEEEee
Confidence             788999999999998765543321 2223588999999999999753

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and types I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>cd08350 BLMT_like BLMT, a bleomycin resistance protein encoded on the transposon Tn5, and similar proteins

Probab=99.54  E-value=1.3e-13  Score=101.71  Aligned_cols=108  Identities=19%  Similarity=0.154  Sum_probs=75.6

Q ss_pred             eeeeeeCCchhhHHHHHHhcCCeeeeeccCcccceeeeeeccCCCCcceEEEEeEecCceeeccCceeeEEEEEecChHH
Q 022831          156 QVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAISTDDVYK  235 (291)
Q Consensus       156 hv~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~~hia~~v~di~~  235 (291)
                      ...|.|+|++++++||++ |||+.....+.   .  ...+..+    ...+.+......   .......|++|.|+|+++
T Consensus         5 ~~~l~v~Dl~~s~~FY~~-lG~~~~~~~~~---~--~~~~~~~----~~~l~l~~~~~~---~~~~~~~~~~~~v~dvd~   71 (120)
T cd08350           5 IPNLPSRDLDATEAFYAR-LGFSVGYRQAA---G--YMILRRG----DLELHFFAHPDL---DPATSPFGCCLRLPDVAA   71 (120)
T ss_pred             cceeEcCCHHHHHHHHHH-cCCEEEecCCC---C--EEEEEcC----CEEEEEEecCcC---CCCCCcceEEEEeCCHHH
Confidence            356899999999999999 99998755321   1  2233322    245555443211   112234689999999999


Q ss_pred             HHHHHHHHHHhhCCeee-------ecccccCCCCceEEEEECCCCCeEEEEec
Q 022831          236 SAEVVNLVTQELGGKIT-------RQPGPIPGLNTKITSFVDPDGWKTVLVDN  281 (291)
Q Consensus       236 ~~~~l~~~~~~~G~~~~-------~~p~~~~~~~~~~~~~~DPdG~~iel~~~  281 (291)
                      +++++    +++|+++.       .+|...++ +.+.++|+|||||+|||.|+
T Consensus        72 ~~~~l----~~~G~~~~~~~~~~~~~~~~~~~-g~~~~~~~DPdG~~ie~~~~  119 (120)
T cd08350          72 LHAEF----RAAGLPETGSGIPRITPPEDQPW-GMREFALVDPDGNLLRFGQP  119 (120)
T ss_pred             HHHHH----HHhCccccccCCCcccCCcCCCC-ceeEEEEECCCCCEEEeecC
Confidence            99999    99999753       23333333 57889999999999999985

BLMT is a bleomycin (Bm) resistance protein, encoded by the ble gene on the transposon Tn5. This protein confers a survival advantage to Escherichia coli host cells. Bm is a glycopeptide antibiotic produced naturally by actinomycetes. It is a potent anti-cancer drug, which acts as a strong DNA-cutting agent, thereby causing cell death. BLMT has strong binding affinity to Bm and it protects against this lethal compound through drug sequestering. BLMT has two identically-folded subdomains, with the same alpha/beta fold; these two halves have no sequence similarity. BLMT is a dimer with two Bm-binding pockets formed at the dimer interface.

>cd08357 Glo_EDI_BRP_like_18 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.54  E-value=1.7e-13  Score=101.65  Aligned_cols=113  Identities=21%  Similarity=0.274  Sum_probs=72.7

Q ss_pred             eEEEEeCCHHHHHHHHHHhcCCEEEEEeccCCCceeeEEeeccCCCcceEEEeeecCC----CCc-ccCCCCceEE--EE
Q 022831           26 HAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYG----VTS-YDIGTGFGHL--AI   98 (291)
Q Consensus        26 hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~----~~~-~~~g~~~~~i--~~   98 (291)
                      ||.|.|+|++++++||+++|||++.....    .  ...+..+  +..+.+.+.....    ... .....+..|+  ++
T Consensus         2 Hi~l~v~Dl~~s~~FY~~~lG~~~~~~~~----~--~~~~~~~--~~~~~l~~~~~~~~~~~~~~~~~~~~~~~h~~~~~   73 (125)
T cd08357           2 HLAIPVRDLEAARAFYGDVLGCKEGRSSE----T--WVDFDFF--GHQLVAHLSPNFNADASDNAVDGHPVPVPHFGLIL   73 (125)
T ss_pred             eEEEEeCCHHHHHHHHHHhcCCEEeeccC----C--ccccccc--CcEEEEEeccCCCcccccCCCCCCccCCceEEEEE
Confidence            99999999999999999999999864321    1  1222221  2233333322110    000 0111234565  45


Q ss_pred             EECCHHHHHHHHHHcCCeeeeCCccCCC---CceEEEEEECCCCcEEEEEe
Q 022831           99 ATEDVYKMVENIRAKGGNVTREPGPLKG---MTTHFAFVKDPDGYIFELIQ  146 (291)
Q Consensus        99 ~v~d~~~~~~~l~~~G~~~~~~~~~~~~---g~~~~~~~~dP~G~~iel~~  146 (291)
                      .++|+++++++|+++|+++..+|.....   +....+|++|||||.|||..
T Consensus        74 ~~~dv~~~~~~l~~~g~~~~~~p~~~~~~~~~~~~~~~~~DPdG~~iE~~~  124 (125)
T cd08357          74 SEEEFDALAERLEAAGVEFLIEPYTRFEGQPGEQETFFLKDPSGNALEFKA  124 (125)
T ss_pred             eHHHHHHHHHHHHHCCCcEecCcceeccCCcCceeEEEEECCCCCEEEEee
Confidence            6689999999999999998866654221   22345889999999999864

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>cd07235 MRD Mitomycin C resistance protein (MRD)

Probab=99.54  E-value=1.9e-13  Score=101.15  Aligned_cols=113  Identities=19%  Similarity=0.201  Sum_probs=74.7

Q ss_pred             ceeeeeeeCCchhhHHHHHHhcCCeeeeeccCcccceeeeeeccCCCCcceEEEEeEecCc-----eeeccCceeeEEEE
Q 022831          154 LCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGV-----TEYTKGNAYAQVAI  228 (291)
Q Consensus       154 ~~hv~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~-----~~~~~~~g~~hia~  228 (291)
                      ++|++|.|+|++++++||++ |||++.......  .+  ..+..++   ...+.+......     ...+.+.+..|++|
T Consensus         1 ~~~i~l~V~D~~~a~~FY~~-LGf~~~~~~~~~--~~--~~~~~~~---~~~l~l~~~~~~~~~~~~~~~~~~~~~~l~~   72 (122)
T cd07235           1 LDAVGIVVADMAKSLDFYRR-LGFDFPEEADDE--PH--VEAVLPG---GVRLAWDTVESIRSFTPGWTPTGGHRIALAF   72 (122)
T ss_pred             CceEEEEeccHHHHHHHHHH-hCceecCCcCCC--Cc--EEEEeCC---CEEEEEEcccceeeecCCCCCCCCCcEEEEE
Confidence            57999999999999999965 999875432111  11  1111111   122322211100     00012335568888


Q ss_pred             Eec---ChHHHHHHHHHHHHhhCCeeeecccccCCCCceEEEEECCCCCeEEEE
Q 022831          229 STD---DVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLV  279 (291)
Q Consensus       229 ~v~---di~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iel~  279 (291)
                      .+.   |++++++++    +++|+++..+|...+. +.+.++|+|||||.|||+
T Consensus        73 ~~~~~~dvd~~~~~l----~~~G~~~~~~~~~~~~-g~~~~~~~DPdG~~iel~  121 (122)
T cd07235          73 LCETPAEVDALYAEL----VGAGYPGHKEPWDAPW-GQRYAIVKDPDGNLVDLF  121 (122)
T ss_pred             EcCCHHHHHHHHHHH----HHCCCCcCCCCccCCC-CCEEEEEECCCCCEEEEe
Confidence            765   799999999    9999999888876665 468899999999999997

Mitomycin C (MC) is a naturally occurring antibiotic, and antitumor agent used in the treatment of cancer. Its antitumor activity is exerted primarily through monofunctional and bifunctional alkylation of DNA. MRD binds to MC and functions as a component of the MC exporting system. MC is bound to MRD by a stacking interaction between a His and a Trp. MRD adopts a structural fold similar to bleomycin resistance protein, glyoxalase I, and extradiol dioxygenases; and it has binding sites at an identical location to binding sites in these evolutionarily related enzymes.

>cd08350 BLMT_like BLMT, a bleomycin resistance protein encoded on the transposon Tn5, and similar proteins

Probab=99.54  E-value=3.1e-13  Score=99.72  Aligned_cols=108  Identities=19%  Similarity=0.173  Sum_probs=75.1

Q ss_pred             eEEEEeCCHHHHHHHHHHhcCCEEEEEeccCCCceeeEEeeccCCCcceEEEeeecCCCCcccCCCCceEEEEEECCHHH
Q 022831           26 HAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHLAIATEDVYK  105 (291)
Q Consensus        26 hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~g~~~~~i~~~v~d~~~  105 (291)
                      ...|.|+|++++++||++ |||++..+...     ...++..+  +  ..+.+.......   ......+++|.|+|+++
T Consensus         5 ~~~l~v~Dl~~s~~FY~~-lG~~~~~~~~~-----~~~~~~~~--~--~~l~l~~~~~~~---~~~~~~~~~~~v~dvd~   71 (120)
T cd08350           5 IPNLPSRDLDATEAFYAR-LGFSVGYRQAA-----GYMILRRG--D--LELHFFAHPDLD---PATSPFGCCLRLPDVAA   71 (120)
T ss_pred             cceeEcCCHHHHHHHHHH-cCCEEEecCCC-----CEEEEEcC--C--EEEEEEecCcCC---CCCCcceEEEEeCCHHH
Confidence            467899999999999999 99998754321     13344432  2  244444332111   11233578999999999


Q ss_pred             HHHHHHHcCCeee-------eCCccCCCCceEEEEEECCCCcEEEEEec
Q 022831          106 MVENIRAKGGNVT-------REPGPLKGMTTHFAFVKDPDGYIFELIQR  147 (291)
Q Consensus       106 ~~~~l~~~G~~~~-------~~~~~~~~g~~~~~~~~dP~G~~iel~~~  147 (291)
                      ++++|.++|+++.       .++...++|.+ .++++||+|+.|+|.+.
T Consensus        72 ~~~~l~~~G~~~~~~~~~~~~~~~~~~~g~~-~~~~~DPdG~~ie~~~~  119 (120)
T cd08350          72 LHAEFRAAGLPETGSGIPRITPPEDQPWGMR-EFALVDPDGNLLRFGQP  119 (120)
T ss_pred             HHHHHHHhCccccccCCCcccCCcCCCCcee-EEEEECCCCCEEEeecC
Confidence            9999999999742       33444456655 48899999999999874

BLMT is a bleomycin (Bm) resistance protein, encoded by the ble gene on the transposon Tn5. This protein confers a survival advantage to Escherichia coli host cells. Bm is a glycopeptide antibiotic produced naturally by actinomycetes. It is a potent anti-cancer drug, which acts as a strong DNA-cutting agent, thereby causing cell death. BLMT has strong binding affinity to Bm and it protects against this lethal compound through drug sequestering. BLMT has two identically-folded subdomains, with the same alpha/beta fold; these two halves have no sequence similarity. BLMT is a dimer with two Bm-binding pockets formed at the dimer interface.

>TIGR03213 23dbph12diox 2,3-dihydroxybiphenyl 1,2-dioxygenase

Probab=99.54  E-value=2.6e-13  Score=115.56  Aligned_cols=119  Identities=21%  Similarity=0.319  Sum_probs=83.7

Q ss_pred             CccceeeEEEEeCCHHHHHHHHHHhcCCEEEEEecc--CCC-ceeeEEeeccCCCcceEEEeeecCCCCcccCCCCceEE
Q 022831           20 DKRRLLHAVYRVGDLDRTIKYYTECFGMELLRKRDV--PEE-KYSNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHL   96 (291)
Q Consensus        20 ~~~~i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~--~~~-~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~g~~~~~i   96 (291)
                      .+.+|+||.|.|+|++++.+||+++|||++......  +++ .+...++..++..  ..+.+...      ....+++|+
T Consensus       139 ~~~~l~Hv~l~v~Dle~s~~FY~~~LGf~~~~~~~~~~~~g~~~~~~~l~~~~~~--~~~~l~~~------~~~~~~~Hi  210 (286)
T TIGR03213       139 GDQGLGHIVLRVPDVDAALAFYTEVLGFQLSDVIDLPAGPGVTVRPYFLHCNERH--HSLAFAAG------PSEKRLNHL  210 (286)
T ss_pred             CCccccEEEEEcCCHHHHHHHHHHccCCeEEEeEcccCCCCCcceEEEEEECCCc--ceEEEecC------CCCCceEEE
Confidence            468999999999999999999999999998654322  111 1134556543322  22332211      123478999


Q ss_pred             EEEECCHHH---HHHHHHHcCCeeeeCCccCCCCceEEEEEECCCCcEEEEEec
Q 022831           97 AIATEDVYK---MVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFELIQR  147 (291)
Q Consensus        97 ~~~v~d~~~---~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dP~G~~iel~~~  147 (291)
                      +|.|+|+++   ++++|+++|+ ....+.....+...++|++||+|++||+...
T Consensus       211 af~v~d~~~v~~~~~~l~~~G~-~~~~~~r~~~~~~~~~y~~DP~G~~iE~~~~  263 (286)
T TIGR03213       211 MLEVDTLDDVGLALDRVDADGI-VASTLGRHTNDHMVSFYVATPSGWLVEYGWG  263 (286)
T ss_pred             EEEcCCHHHHHHHHHHHHHCCC-EEecCCcCCCCCeEEEEEECCCCcEEEeecC
Confidence            999998776   7999999999 4445555444445568899999999999863

Members of this protein family all have activity as 2,3-dihydroxybiphenyl 1,2-dioxygenase, the third enzyme of a pathway for biphenyl degradation. Many of the extradiol ring-cleaving dioxygenases, to which these proteins belong, act on a range of related substrates. Note that some members of this family may be found operons for toluene or naphthalene degradation, where other activities of the same enzyme may be more significant; the trusted cutoff for this model is set relatively high to exclude most such instances.

>cd08344 MhqB_like_N N-terminal domain of MhqB, a type I extradiol dioxygenase, and similar proteins

Probab=99.53  E-value=2.2e-13  Score=99.29  Aligned_cols=106  Identities=22%  Similarity=0.236  Sum_probs=73.2

Q ss_pred             CceeeeeeeCCchhhHHHHHHhcCCeeeeeccCcccceeeeeeccCCCCcceEEEEeEecCceeeccCceeeE--EEEEe
Q 022831          153 PLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQ--VAIST  230 (291)
Q Consensus       153 ~~~hv~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~~h--ia~~v  230 (291)
                      +|.|+.|.|+|++++++||. .|||++....   +   ...+...+.  .+..+.+....       ..++.|  +++.+
T Consensus         2 ~i~hv~l~v~d~~~s~~FY~-~lG~~~~~~~---~---~~~~~~~~~--~~~~~~~~~~~-------~~~~~~~~~~~~~   65 (112)
T cd08344           2 SIDHFALEVPDLEVARRFYE-AFGLDVREEG---D---GLELRTAGN--DHRWARLLEGA-------RKRLAYLSFGIFE   65 (112)
T ss_pred             ceeEEEEecCCHHHHHHHHH-HhCCcEEeec---C---ceEEEecCC--CceEEEeecCC-------CCceeeEEEEeEh
Confidence            58999999999999999997 6999986542   1   122222111  23444443211       223444  55566


Q ss_pred             cChHHHHHHHHHHHHhhCCeeeecccccCCCCceEEEEECCCCCeEEEEec
Q 022831          231 DDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDN  281 (291)
Q Consensus       231 ~di~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iel~~~  281 (291)
                      +|++++++++    +++|+++..++.  +. +.+.+||+||+||.|||...
T Consensus        66 ~d~~~~~~~l----~~~Gi~~~~~~~--~~-~~~~~~~~DP~Gn~iel~~~  109 (112)
T cd08344          66 DDFAAFARHL----EAAGVALAAAPP--GA-DPDGVWFRDPDGNLLQVKVA  109 (112)
T ss_pred             hhHHHHHHHH----HHcCCceecCCC--cC-CCCEEEEECCCCCEEEEecC
Confidence            8999999999    999999877652  22 24578999999999999864

This subfamily contains the N-terminal, non-catalytic, domain of Burkholderia sp. NF100 MhqB and similar proteins. MhqB is a type I extradiol dioxygenase involved in the catabolism of methylhydroquinone, an intermediate in the degradation of fenitrothion. The purified enzyme has shown extradiol ring cleavage activity toward 3-methylcatechol. Fe2+ was suggested as a cofactor, the same as most other enzymes in the family. Burkholderia sp. NF100 MhqB is encoded on the plasmid pNF1. The type I family of extradiol dioxygenases contains two structurally homologous barrel-shaped domains at the N- and C-terminal. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism.

>cd07261 Glo_EDI_BRP_like_11 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.53  E-value=4e-13  Score=98.15  Aligned_cols=108  Identities=23%  Similarity=0.277  Sum_probs=77.5

Q ss_pred             EEEEeCCHHHHHHHHHHhcCCEEEEEeccCCCceeeEEeeccCCCcceEEEeeecCCCCc-ccCCCCceEEEEEECC---
Q 022831           27 AVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTS-YDIGTGFGHLAIATED---  102 (291)
Q Consensus        27 v~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~-~~~g~~~~~i~~~v~d---  102 (291)
                      +.|.|+|++++++||+++|||++....    ..  ...+..+. +  ..+.+........ .....+..|++|.|+|   
T Consensus         2 ~~l~v~d~~~a~~FY~~~lg~~~~~~~----~~--~~~~~~~~-~--~~~~l~~~~~~~~~~~~~~~~~~~~~~v~~~~~   72 (114)
T cd07261           2 VLLYVEDPAASAEFYSELLGREPVELS----PT--FALFVLGS-G--VKLGLWSRHTVEPASDATGGGSELAFMVDDGAA   72 (114)
T ss_pred             EEEEECCHHHHHHHHHHHcCCCccCCC----Cc--eEEEEeCC-C--cEEEEeeccccCCCCCCCCCceEEEEEcCCHHH
Confidence            679999999999999999999986531    11  23333321 2  2344443322211 1123467899999976   


Q ss_pred             HHHHHHHHHHcCCeeeeCCccCCCCceEEEEEECCCCcEEEEE
Q 022831          103 VYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFELI  145 (291)
Q Consensus       103 ~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dP~G~~iel~  145 (291)
                      ++++++++.++|+++..+|...++|.  .++|+||+||.|+++
T Consensus        73 ~~~~~~~~~~~g~~v~~~~~~~~~g~--~~~~~DPdGn~ie~~  113 (114)
T cd07261          73 VDALYAEWQAKGVKIIQEPTEMDFGY--TFVALDPDGHRLRVF  113 (114)
T ss_pred             HHHHHHHHHHCCCeEecCccccCCcc--EEEEECCCCCEEEee
Confidence            88899999999999988887777764  378999999999986

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd06587 Glo_EDI_BRP_like This domain superfamily is found in a variety of structurally related metalloproteins, including the type I extradiol dioxygenases, glyoxalase I and a group of antibiotic resistance proteins

Probab=99.52  E-value=1.9e-13  Score=98.60  Aligned_cols=112  Identities=29%  Similarity=0.384  Sum_probs=82.7

Q ss_pred             eeeeeeCCchhhHHHHHHhcCCeeeeeccCcccceeeeeeccCCCCcceEEEEeEecCceeeccCceeeEEEEEecChHH
Q 022831          156 QVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAISTDDVYK  235 (291)
Q Consensus       156 hv~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~~hia~~v~di~~  235 (291)
                      |+.+.|+|++++.+||.++||++.........  ....++..+    ...+.+....+......+.+..|++|.|+|+++
T Consensus         1 Hi~i~~~d~~~~~~fy~~~lg~~~~~~~~~~~--~~~~~~~~~----~~~i~l~~~~~~~~~~~~~~~~~~~~~v~~~~~   74 (112)
T cd06587           1 HVGLTVSDLEAAVAFYEEVLGFEVLFRNGNGG--AEFAVLGLG----GTRLELFEGDEPAPAPSGGGGVHLAFEVDDVDA   74 (112)
T ss_pred             CcceeeCCHHHHHHHHHhccCCEEEEeeccCC--EEEEEEecC----CceEEEecCCCCCCcccCCCeeEEEEECCCHHH
Confidence            78999999999999999999999877653211  233444432    355666554332211234678999999999999


Q ss_pred             HHHHHHHHHHhhCCeeeecccccCCCCceEEEEECCCCCeEEE
Q 022831          236 SAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVL  278 (291)
Q Consensus       236 ~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iel  278 (291)
                      +.+++    .++|+.+..++.. ...+.+.+++.||+|+.|||
T Consensus        75 ~~~~l----~~~g~~~~~~~~~-~~~~~~~~~~~Dp~G~~~~~  112 (112)
T cd06587          75 AYERL----KAAGVEVLGEPRE-EPWGGRVAYFRDPDGNLIEL  112 (112)
T ss_pred             HHHHH----HHcCCcccCCCcC-CCCCcEEEEEECCCCcEEeC
Confidence            99999    9999998877652 23346889999999999986

This domain superfamily is found in a variety of structurally related metalloproteins, including the type I extradiol dioxygenases, glyoxalase I and a group of antibiotic resistance proteins. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). Type I extradiol dioxygenases catalyze the incorporation of both atoms of molecular oxygen into aromatic substrates, which results in the cleavage of aromatic rings. They are key enzymes in the degradation of aromatic compounds. Type I extradiol dioxygenases include class I and class II enzymes. Class I and II enzymes show sequence similarity; the two-domain clas

>PF13669 Glyoxalase_4: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily; PDB: 3RMU_B 3ISQ_A 1JC5_D 1JC4_D 3HDP_A 2QH0_A 3GM5_A 3OA4_A 3CT8_A

Probab=99.52  E-value=1.6e-13  Score=99.41  Aligned_cols=95  Identities=25%  Similarity=0.308  Sum_probs=76.3

Q ss_pred             eeEEEEeCCHHHHHHHHHHhcCCEEEEEeccCCCceeeEEeeccCCCcceEEEeeecCCCCc--ccCCCCceEEEEEECC
Q 022831           25 LHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTS--YDIGTGFGHLAIATED  102 (291)
Q Consensus        25 ~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~--~~~g~~~~~i~~~v~d  102 (291)
                      +||+|.|+|++++.+||+++||++.......+....+..++..+.  ....++|.++.....  ...+.|++||||.|+|
T Consensus         1 dHv~i~V~Dl~~a~~~~~~~lG~~~~~~~~~~~~~v~~~~~~~~~--~~~~iELi~p~~~~~~~~~~~~gi~Hia~~v~D   78 (109)
T PF13669_consen    1 DHVGIVVPDLDAAAAFYCDVLGFEPWERYRDEPQGVRVAFLYLGD--GPVQIELIQPLDGDSPLDRGGGGIHHIAFEVDD   78 (109)
T ss_dssp             EEEEEEES-HHHHHHHHHHCTTHEEEEEEEEGCTTEEEEEEEETT--ETEEEEEEEESSTTCHHHHTSSEEEEEEEEESH
T ss_pred             CEEEEEcCCHHHHHHHHHHhhCCcEEEEEecCCCCEEEEEEEeCC--CcEEEEEEEeCCCCcccccCCCCEEEEEEEeCC
Confidence            699999999999999999999999887666666666777776543  226788887655442  2377799999999999


Q ss_pred             HHHHHHHHHHcCCeeeeCC
Q 022831          103 VYKMVENIRAKGGNVTREP  121 (291)
Q Consensus       103 ~~~~~~~l~~~G~~~~~~~  121 (291)
                      ++++.++|+++|+++...+
T Consensus        79 ~d~~~~~l~~~G~~~~~~~   97 (109)
T PF13669_consen   79 LDAAIARLEAQGFRVLDEG   97 (109)
T ss_dssp             HHHHHHHHHHTTECEEECE
T ss_pred             HHHHHHHHHHCCCEEcccC
Confidence            9999999999999977653

>cd08357 Glo_EDI_BRP_like_18 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.52  E-value=1.5e-13  Score=102.02  Aligned_cols=113  Identities=17%  Similarity=0.188  Sum_probs=73.4

Q ss_pred             eeeeeeCCchhhHHHHHHhcCCeeeeeccCcccceeeeeeccCCCCcceEEEEeEecCce----ee-ccCceeeEEE--E
Q 022831          156 QVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVT----EY-TKGNAYAQVA--I  228 (291)
Q Consensus       156 hv~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~----~~-~~~~g~~hia--~  228 (291)
                      |+.|.|+|++++++||+++||+++.....    .+  ..+...  .....+.+.......    .. ....+..|++  +
T Consensus         2 Hi~l~v~Dl~~s~~FY~~~lG~~~~~~~~----~~--~~~~~~--~~~~~l~~~~~~~~~~~~~~~~~~~~~~~h~~~~~   73 (125)
T cd08357           2 HLAIPVRDLEAARAFYGDVLGCKEGRSSE----TW--VDFDFF--GHQLVAHLSPNFNADASDNAVDGHPVPVPHFGLIL   73 (125)
T ss_pred             eEEEEeCCHHHHHHHHHHhcCCEEeeccC----Cc--cccccc--CcEEEEEeccCCCcccccCCCCCCccCCceEEEEE
Confidence            89999999999999999999999754321    11  112211  112223322211000    00 0112456765  5


Q ss_pred             EecChHHHHHHHHHHHHhhCCeeeecccccC---CCCceEEEEECCCCCeEEEEe
Q 022831          229 STDDVYKSAEVVNLVTQELGGKITRQPGPIP---GLNTKITSFVDPDGWKTVLVD  280 (291)
Q Consensus       229 ~v~di~~~~~~l~~~~~~~G~~~~~~p~~~~---~~~~~~~~~~DPdG~~iel~~  280 (291)
                      .++|+++++++|    +++|+++..+|....   ..+.+.+|++|||||.|||..
T Consensus        74 ~~~dv~~~~~~l----~~~g~~~~~~p~~~~~~~~~~~~~~~~~DPdG~~iE~~~  124 (125)
T cd08357          74 SEEEFDALAERL----EAAGVEFLIEPYTRFEGQPGEQETFFLKDPSGNALEFKA  124 (125)
T ss_pred             eHHHHHHHHHHH----HHCCCcEecCcceeccCCcCceeEEEEECCCCCEEEEee
Confidence            668999999999    999999988775421   123578999999999999975

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>cd08356 Glo_EDI_BRP_like_17 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.49  E-value=7.7e-13  Score=96.55  Aligned_cols=104  Identities=21%  Similarity=0.282  Sum_probs=71.7

Q ss_pred             EEEEeCCHHHHHHHHHHhcCCEEEEEeccCCCceeeEEeeccCCCcceEEEeeecCCCCcccCCCCceEEEEEECCHHHH
Q 022831           27 AVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHLAIATEDVYKM  106 (291)
Q Consensus        27 v~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~g~~~~~i~~~v~d~~~~  106 (291)
                      ..|.|+|++++++||++ |||++..+..    .  ..++..+  +..  +.+...... .   ..+..+++|.|+|++++
T Consensus         5 ~~l~v~Dl~~s~~FY~~-LGf~~~~~~~----~--~~~l~~~--~~~--l~l~~~~~~-~---~~~~~~~~~~v~did~~   69 (113)
T cd08356           5 PFIPAKDFAESKQFYQA-LGFELEWEND----N--LAYFRLG--NCA--FYLQDYYVK-D---WAENSMLHLEVDDLEAY   69 (113)
T ss_pred             eccccccHHHHHHHHHH-hCCeeEecCC----C--EEEEEcC--CEE--EEeecCCCc-c---cccCCEEEEEECCHHHH
Confidence            46889999999999988 9999976531    1  4555543  222  223221111 1   11335789999999999


Q ss_pred             HHHHHHcCCeee-----eCCccCCCCceEEEEEECCCCcEEEEEe
Q 022831          107 VENIRAKGGNVT-----REPGPLKGMTTHFAFVKDPDGYIFELIQ  146 (291)
Q Consensus       107 ~~~l~~~G~~~~-----~~~~~~~~g~~~~~~~~dP~G~~iel~~  146 (291)
                      +++|+++|+++.     .++...++|.+ .++++|||||+|+|.+
T Consensus        70 ~~~l~~~G~~~~~~~~~~~~~~~~~g~r-~f~~~DPdGn~~~~~~  113 (113)
T cd08356          70 YEHIKALGLPKKFPGVKLPPITQPWWGR-EFFLHDPSGVLWHIGQ  113 (113)
T ss_pred             HHHHHHcCCcccccceecCccccCCCcE-EEEEECCCccEEEeeC
Confidence            999999998742     23344456655 4889999999999864

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd08356 Glo_EDI_BRP_like_17 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.47  E-value=7.3e-13  Score=96.67  Aligned_cols=104  Identities=20%  Similarity=0.204  Sum_probs=71.6

Q ss_pred             eeeeeCCchhhHHHHHHhcCCeeeeeccCcccceeeeeeccCCCCcceEEEEeEecCceeeccCceeeEEEEEecChHHH
Q 022831          157 VMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAISTDDVYKS  236 (291)
Q Consensus       157 v~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~~hia~~v~di~~~  236 (291)
                      ..|.|+|++++.+||++ |||++....+    .+  .++..+    ...+.+.......    ..+..+++|.|+|++++
T Consensus         5 ~~l~v~Dl~~s~~FY~~-LGf~~~~~~~----~~--~~l~~~----~~~l~l~~~~~~~----~~~~~~~~~~v~did~~   69 (113)
T cd08356           5 PFIPAKDFAESKQFYQA-LGFELEWEND----NL--AYFRLG----NCAFYLQDYYVKD----WAENSMLHLEVDDLEAY   69 (113)
T ss_pred             eccccccHHHHHHHHHH-hCCeeEecCC----CE--EEEEcC----CEEEEeecCCCcc----cccCCEEEEEECCHHHH
Confidence            45789999999999987 9999876531    12  333322    2333343211111    12335789999999999


Q ss_pred             HHHHHHHHHhhCCeee-----ecccccCCCCceEEEEECCCCCeEEEEe
Q 022831          237 AEVVNLVTQELGGKIT-----RQPGPIPGLNTKITSFVDPDGWKTVLVD  280 (291)
Q Consensus       237 ~~~l~~~~~~~G~~~~-----~~p~~~~~~~~~~~~~~DPdG~~iel~~  280 (291)
                      ++++    +++|+++.     .+|...+ .+.+.++|+|||||+|+|.+
T Consensus        70 ~~~l----~~~G~~~~~~~~~~~~~~~~-~g~r~f~~~DPdGn~~~~~~  113 (113)
T cd08356          70 YEHI----KALGLPKKFPGVKLPPITQP-WWGREFFLHDPSGVLWHIGQ  113 (113)
T ss_pred             HHHH----HHcCCcccccceecCccccC-CCcEEEEEECCCccEEEeeC
Confidence            9999    99998743     2333333 35789999999999999864

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd07251 Glo_EDI_BRP_like_10 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.45  E-value=1.6e-12  Score=95.74  Aligned_cols=111  Identities=25%  Similarity=0.247  Sum_probs=75.2

Q ss_pred             eeeeeCCchhhHHHHHHhcCCeeeeeccCcccceeeeeeccCCCCcceEEEEeEecCc------eeeccCceeeEEEEEe
Q 022831          157 VMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGV------TEYTKGNAYAQVAIST  230 (291)
Q Consensus       157 v~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~------~~~~~~~g~~hia~~v  230 (291)
                      |.|.|+|++++.+||+++|||++....   +..+  .++..+    ...+.+......      .....+.+..|++|.+
T Consensus         2 i~l~v~d~~~a~~FY~~~lg~~~~~~~---~~~~--~~~~~~----~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~   72 (121)
T cd07251           2 ITLGVADLARSRAFYEALLGWKPSADS---NDGV--AFFQLG----GLVLALFPREELAKDAGVPVPPPGFSGITLAHNV   72 (121)
T ss_pred             eeEeeCCHHHHHHHHHHhcCceecccC---CCce--EEEEcC----CeEEEEecchhhhhhcCCCCCCCCccceEEEEEc
Confidence            679999999999999999999976551   1112  233322    244555432110      0111222334566655


Q ss_pred             ---cChHHHHHHHHHHHHhhCCeeeecccccCCCCceEEEEECCCCCeEEEEec
Q 022831          231 ---DDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDN  281 (291)
Q Consensus       231 ---~di~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iel~~~  281 (291)
                         +|++++++++    .+.|+++..+|...++ +++.++++||+||+||+..+
T Consensus        73 ~~~~d~~~~~~~l----~~~G~~~~~~~~~~~~-g~~~~~~~DP~Gn~iei~~~  121 (121)
T cd07251          73 RSEEEVDAVLARA----AAAGATIVKPPQDVFW-GGYSGYFADPDGHLWEVAHN  121 (121)
T ss_pred             CCHHHHHHHHHHH----HhCCCEEecCCccCCC-CceEEEEECCCCCEEEEeeC
Confidence               5788888888    9999999888776654 47889999999999999753

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>PF13669 Glyoxalase_4: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily; PDB: 3RMU_B 3ISQ_A 1JC5_D 1JC4_D 3HDP_A 2QH0_A 3GM5_A 3OA4_A 3CT8_A

Probab=99.44  E-value=6.6e-13  Score=96.23  Aligned_cols=95  Identities=18%  Similarity=0.221  Sum_probs=74.3

Q ss_pred             eeeeeeeCCchhhHHHHHHhcCCeeeeeccCcccceeeeeeccCCCCcceEEEEeEecCcee--eccCceeeEEEEEecC
Q 022831          155 CQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTE--YTKGNAYAQVAISTDD  232 (291)
Q Consensus       155 ~hv~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~--~~~~~g~~hia~~v~d  232 (291)
                      +||.+.|+|++++++||.++||+........+.......++..++.  ...|||..+.+..+  ...+.|++||+|.|+|
T Consensus         1 dHv~i~V~Dl~~a~~~~~~~lG~~~~~~~~~~~~~v~~~~~~~~~~--~~~iELi~p~~~~~~~~~~~~gi~Hia~~v~D   78 (109)
T PF13669_consen    1 DHVGIVVPDLDAAAAFYCDVLGFEPWERYRDEPQGVRVAFLYLGDG--PVQIELIQPLDGDSPLDRGGGGIHHIAFEVDD   78 (109)
T ss_dssp             EEEEEEES-HHHHHHHHHHCTTHEEEEEEEEGCTTEEEEEEEETTE--TEEEEEEEESSTTCHHHHTSSEEEEEEEEESH
T ss_pred             CEEEEEcCCHHHHHHHHHHhhCCcEEEEEecCCCCEEEEEEEeCCC--cEEEEEEEeCCCCcccccCCCCEEEEEEEeCC
Confidence            5999999999999999999999997766555555566666664432  26889887655432  2367899999999999


Q ss_pred             hHHHHHHHHHHHHhhCCeeeecc
Q 022831          233 VYKSAEVVNLVTQELGGKITRQP  255 (291)
Q Consensus       233 i~~~~~~l~~~~~~~G~~~~~~p  255 (291)
                      ++++.+++    +++|+++...+
T Consensus        79 ~d~~~~~l----~~~G~~~~~~~   97 (109)
T PF13669_consen   79 LDAAIARL----EAQGFRVLDEG   97 (109)
T ss_dssp             HHHHHHHH----HHTTECEEECE
T ss_pred             HHHHHHHH----HHCCCEEcccC
Confidence            99999999    99999987764

>cd07251 Glo_EDI_BRP_like_10 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.44  E-value=2.5e-12  Score=94.76  Aligned_cols=110  Identities=23%  Similarity=0.305  Sum_probs=74.9

Q ss_pred             EEEEeCCHHHHHHHHHHhcCCEEEEEeccCCCceeeEEeeccCCCcceEEEeeecCC------CCcccCCCCceEEEEEE
Q 022831           27 AVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYG------VTSYDIGTGFGHLAIAT  100 (291)
Q Consensus        27 v~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~------~~~~~~g~~~~~i~~~v  100 (291)
                      |.|.|+|++++.+||+++|||++..+.   ..  ...++..+  .  ..+.+.....      ......+.+..+++|.+
T Consensus         2 i~l~v~d~~~a~~FY~~~lg~~~~~~~---~~--~~~~~~~~--~--~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~   72 (121)
T cd07251           2 ITLGVADLARSRAFYEALLGWKPSADS---ND--GVAFFQLG--G--LVLALFPREELAKDAGVPVPPPGFSGITLAHNV   72 (121)
T ss_pred             eeEeeCCHHHHHHHHHHhcCceecccC---CC--ceEEEEcC--C--eEEEEecchhhhhhcCCCCCCCCccceEEEEEc
Confidence            789999999999999999999986541   11  13444432  2  2344332111      11111222334566655


Q ss_pred             ---CCHHHHHHHHHHcCCeeeeCCccCCCCceEEEEEECCCCcEEEEEe
Q 022831          101 ---EDVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFELIQ  146 (291)
Q Consensus       101 ---~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dP~G~~iel~~  146 (291)
                         +|++++++++.+.|+++..++...++|.. .++++||+||+||+..
T Consensus        73 ~~~~d~~~~~~~l~~~G~~~~~~~~~~~~g~~-~~~~~DP~Gn~iei~~  120 (121)
T cd07251          73 RSEEEVDAVLARAAAAGATIVKPPQDVFWGGY-SGYFADPDGHLWEVAH  120 (121)
T ss_pred             CCHHHHHHHHHHHHhCCCEEecCCccCCCCce-EEEEECCCCCEEEEee
Confidence               67999999999999999877776666644 4889999999999975

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd07250 HPPD_C_like C-terminal domain of 4-hydroxyphenylpyruvate dioxygenase (HppD) and hydroxymandelate Synthase (HmaS)

Probab=99.32  E-value=2.1e-11  Score=97.22  Aligned_cols=100  Identities=24%  Similarity=0.390  Sum_probs=73.8

Q ss_pred             ccceeeEEEEeC--CHHHHHHHHHHhcCCEEEEEeccCC--CceeeEEeeccCCCcceEEEeeecCCC--Cc-------c
Q 022831           21 KRRLLHAVYRVG--DLDRTIKYYTECFGMELLRKRDVPE--EKYSNAFLGFGPEQSYFVVELTYNYGV--TS-------Y   87 (291)
Q Consensus        21 ~~~i~hv~l~v~--d~~~~~~FY~~~lG~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~l~l~~~~~~--~~-------~   87 (291)
                      +.+|+||++.|+  |++++.+||+++|||+.......++  .......+..+  ...+.+++..+...  ..       .
T Consensus         1 ~~~iDHv~i~V~~~dl~~a~~fY~~~LGf~~~~~~~~~~~~~~~~s~~l~~~--~g~i~l~L~~~~~~~~~s~~~~fl~~   78 (191)
T cd07250           1 LTRIDHVVGNVPDGEMDSWVDFYRKVLGFHRFWSFDIEDPYSGLRSRVLASP--DGKIRIPLNEPASGKRKSQIQEFLEY   78 (191)
T ss_pred             CceeeEEEeecChhHHHHHHHHHHHhhCCceeeEEccCcCcccEEEEEEECC--CCcEEEEEecCCCCCCccHHHHHHHH
Confidence            367999999999  9999999999999999887654433  23333444432  34556666654331  11       1


Q ss_pred             cCCCCceEEEEEECCHHHHHHHHHHcCCeeeeCCc
Q 022831           88 DIGTGFGHLAIATEDVYKMVENIRAKGGNVTREPG  122 (291)
Q Consensus        88 ~~g~~~~~i~~~v~d~~~~~~~l~~~G~~~~~~~~  122 (291)
                      ..|.|+.||||.|+|+++++++|+++|+++...|.
T Consensus        79 ~~G~Gv~HIAf~vdDI~~~~~~L~~~Gv~~l~~P~  113 (191)
T cd07250          79 YGGAGVQHIALATDDIFATVAALRARGVEFLPIPD  113 (191)
T ss_pred             hCCCceeEEEEECCCHHHHHHHHHHcCCeeccCch
Confidence            24779999999999999999999999999876653

HppD and HmaS are non-heme iron-dependent dioxygenases, which modify a common substrate, 4-hydroxyphenylpyruvate (HPP), but yield different products. HPPD catalyzes the second reaction in tyrosine catabolism, the conversion of 4-hydroxyphenylpyruvate to homogentisate (2,5-dihydroxyphenylacetic acid, HG). HmaS converts HPP to 4-hydroxymandelate, a committed step in the formation of hydroxyphenylglycerine, a structural component of nonproteinogenic macrocyclic peptide antibiotics, such as vancomycin. If the emphasis is on catalytic chemistry, HPPD and HmaS are classified as members of a large family of alpha-keto acid dependent mononuclear non-heme iron oxygenases most of which require Fe(II), molecular oxygen, and an alpha-keto acid (typically alpha-ketoglutarate) to either oxygenate or oxidize a third substrate. Both enzymes are exceptions in that they require two,

>COG2514 Predicted ring-cleavage extradiol dioxygenase [General function prediction only]

Probab=99.30  E-value=3.2e-11  Score=97.29  Aligned_cols=122  Identities=21%  Similarity=0.217  Sum_probs=89.2

Q ss_pred             CCCCceeeeeeeCCchhhHHHHHHhcCCeeeeeccCcccceeeeeeccCCCCcceEEEEeEecCce-eeccCceeeEEEE
Q 022831          150 TPEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVT-EYTKGNAYAQVAI  228 (291)
Q Consensus       150 ~~~~~~hv~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~-~~~~~~g~~hia~  228 (291)
                      .+..+..+.|+|+|++.+..||++++|+++..+.+      ....++.++   ...|.|.+.++.. +.+...|+.|+||
T Consensus         7 ~~~~v~~v~L~vrdL~~~~~FY~~ilGL~v~~~~~------~~v~L~vgg---~~LL~L~q~~~a~~~~~~~aGLyH~Af   77 (265)
T COG2514           7 TPTFVGAVTLNVRDLDSMTSFYQEILGLQVLEETD------GSVTLGVGG---TPLLTLEQFPDARRPPPRAAGLYHTAF   77 (265)
T ss_pred             CCcEEEEEEEEeccHHHHHHHHHHhhCCeeeeccC------ceEEEeeCC---EEEEEEEeCCCCCCCCccccceeeeee
Confidence            34568889999999999999999999999887643      223334332   2456665533332 2344679999999


Q ss_pred             EecChHHHHHHHHHHHHhhCCeeeecccccCCCCceEEEEECCCCCeEEEEechhh
Q 022831          229 STDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNEDF  284 (291)
Q Consensus       229 ~v~di~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~~~  284 (291)
                      .+++..++.+.+ .++.+.|..+. +.+++..  .-.+||.||+||-||++.++|.
T Consensus        78 LlP~r~~L~~~l-~hl~~~~~~l~-Ga~DH~v--SEAlYl~DPEGNGIEiYaDrp~  129 (265)
T COG2514          78 LLPTREDLARVL-NHLAEEGIPLV-GASDHLV--SEALYLEDPEGNGIEIYADRPR  129 (265)
T ss_pred             ecCCHHHHHHHH-HHHHhcCCccc-ccCcchh--heeeeecCCCCCeEEEEecCCh
Confidence            999877777776 34488898875 4555655  4579999999999999998664

>cd07250 HPPD_C_like C-terminal domain of 4-hydroxyphenylpyruvate dioxygenase (HppD) and hydroxymandelate Synthase (HmaS)

Probab=99.18  E-value=1.4e-10  Score=92.38  Aligned_cols=99  Identities=19%  Similarity=0.324  Sum_probs=73.8

Q ss_pred             CCceeeeeeeC--CchhhHHHHHHhcCCeeeeeccCcc--cceeeeeeccCCCCcceEEEEeEecC--cee-------ec
Q 022831          152 EPLCQVMLRVG--DLGRSIKFYEKALGMKLLRTIDSPE--LKCALAMLGYAEEDQTTVLELAYSYG--VTE-------YT  218 (291)
Q Consensus       152 ~~~~hv~l~v~--D~~~~~~Fy~~~lG~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~l~l~~~~~--~~~-------~~  218 (291)
                      .+++|+++.|+  |++++.+||+++|||+.....+.++  .......+..+  .....|+|..+..  ..+       ..
T Consensus         2 ~~iDHv~i~V~~~dl~~a~~fY~~~LGf~~~~~~~~~~~~~~~~s~~l~~~--~g~i~l~L~~~~~~~~~s~~~~fl~~~   79 (191)
T cd07250           2 TRIDHVVGNVPDGEMDSWVDFYRKVLGFHRFWSFDIEDPYSGLRSRVLASP--DGKIRIPLNEPASGKRKSQIQEFLEYY   79 (191)
T ss_pred             ceeeEEEeecChhHHHHHHHHHHHhhCCceeeEEccCcCcccEEEEEEECC--CCcEEEEEecCCCCCCccHHHHHHHHh
Confidence            35899999999  9999999999999999877654332  23344444432  2346677765433  111       22


Q ss_pred             cCceeeEEEEEecChHHHHHHHHHHHHhhCCeeeeccc
Q 022831          219 KGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPG  256 (291)
Q Consensus       219 ~~~g~~hia~~v~di~~~~~~l~~~~~~~G~~~~~~p~  256 (291)
                      .|+|++||||.|+|++++++++    ++.|+++...|.
T Consensus        80 ~G~Gv~HIAf~vdDI~~~~~~L----~~~Gv~~l~~P~  113 (191)
T cd07250          80 GGAGVQHIALATDDIFATVAAL----RARGVEFLPIPD  113 (191)
T ss_pred             CCCceeEEEEECCCHHHHHHHH----HHcCCeeccCch
Confidence            4789999999999999999999    999999988774

HppD and HmaS are non-heme iron-dependent dioxygenases, which modify a common substrate, 4-hydroxyphenylpyruvate (HPP), but yield different products. HPPD catalyzes the second reaction in tyrosine catabolism, the conversion of 4-hydroxyphenylpyruvate to homogentisate (2,5-dihydroxyphenylacetic acid, HG). HmaS converts HPP to 4-hydroxymandelate, a committed step in the formation of hydroxyphenylglycerine, a structural component of nonproteinogenic macrocyclic peptide antibiotics, such as vancomycin. If the emphasis is on catalytic chemistry, HPPD and HmaS are classified as members of a large family of alpha-keto acid dependent mononuclear non-heme iron oxygenases most of which require Fe(II), molecular oxygen, and an alpha-keto acid (typically alpha-ketoglutarate) to either oxygenate or oxidize a third substrate. Both enzymes are exceptions in that they require two,

>TIGR01263 4HPPD 4-hydroxyphenylpyruvate dioxygenase

Probab=99.16  E-value=2.8e-10  Score=99.59  Aligned_cols=103  Identities=20%  Similarity=0.363  Sum_probs=74.4

Q ss_pred             CcCCccceeeEEEEeC--CHHHHHHHHHHhcCCEEEEEeccCC--CceeeEEeeccCCCcceEEEeeecCC---CC----
Q 022831           17 PKKDKRRLLHAVYRVG--DLDRTIKYYTECFGMELLRKRDVPE--EKYSNAFLGFGPEQSYFVVELTYNYG---VT----   85 (291)
Q Consensus        17 ~~~~~~~i~hv~l~v~--d~~~~~~FY~~~lG~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~l~l~~~~~---~~----   85 (291)
                      +.+.+.+|+||++.|+  |++++..||+++|||++....+...  .......+.  .....+.+++..+..   ..    
T Consensus       152 ~~~~~~~iDHv~i~V~~~dl~~~~~fY~~~lGf~~~~~~~~~~~~~~~~s~~~~--~~~g~~~i~L~ep~~~~~~s~i~~  229 (353)
T TIGR01263       152 PGVGLIAIDHLVGNVYRGQMEPWAEFYEKIFGFREIRSFDIKTEYSALNSIVMA--SPDGKVKIPLNEPASGKDKSQIEE  229 (353)
T ss_pred             CCCCeEEeeeeEcccCCccHHHHHHHHHHHhCCceeeEEEeccCCccEEEEEEE--CCCCcEEEEEeccCCCCCCCHHHH
Confidence            4467899999999999  9999999999999999976554322  122222222  112345667665321   11    


Q ss_pred             --cccCCCCceEEEEEECCHHHHHHHHHHcCCeeeeCC
Q 022831           86 --SYDIGTGFGHLAIATEDVYKMVENIRAKGGNVTREP  121 (291)
Q Consensus        86 --~~~~g~~~~~i~~~v~d~~~~~~~l~~~G~~~~~~~  121 (291)
                        ....|.|+.||||.|+|+++++++|+++|+++...|
T Consensus       230 fl~~~~g~Gv~HiAf~vdDi~~~~~~l~~~Gv~~l~~P  267 (353)
T TIGR01263       230 FLEFYNGAGVQHIALNTDDIVRTVRALRARGVEFLDTP  267 (353)
T ss_pred             HHHHcCCCCccEEEEEcCCHHHHHHHHHHcCCccCcCC
Confidence              122478999999999999999999999999987655

This protein oxidizes 4-hydroxyphenylpyruvate, a tyrosine and phenylalanine catabolite, to homogentisate. Homogentisate can undergo a further non-enzymatic oxidation and polymerization into brown pigments that protect some bacterial species from light. A similar process occurs spontaneously in blood and is hemolytic (see PubMed:8000039). In some bacterial species, this enzyme has been studied as a hemolysin.

>COG2764 PhnB Uncharacterized protein conserved in bacteria [Function unknown]

Probab=99.07  E-value=5.1e-09  Score=77.46  Aligned_cols=117  Identities=15%  Similarity=0.168  Sum_probs=83.4

Q ss_pred             eeeeC-CchhhHHHHHHhcCCeeeeeccCcc----------cceeeeeeccCCCCcceEEEEeEecCceeecc-CceeeE
Q 022831          158 MLRVG-DLGRSIKFYEKALGMKLLRTIDSPE----------LKCALAMLGYAEEDQTTVLELAYSYGVTEYTK-GNAYAQ  225 (291)
Q Consensus       158 ~l~v~-D~~~~~~Fy~~~lG~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~-~~g~~h  225 (291)
                      -|..+ |.+++.+||+++||.+...+...++          +.....-+..+    ...|.+....+...... ++.-..
T Consensus         5 Yl~f~gn~~~Al~fY~~vFgae~~~~~~~~d~~~~~~~~~~~~i~HA~l~i~----g~~im~sd~~~~~~~~~~~~~s~~   80 (136)
T COG2764           5 YLFFNGNAREALAFYKEVFGAEELKRVPFGDMPSSAGEPPGGRIMHAELRIG----GSTIMLSDAFPDMGATEGGGTSLS   80 (136)
T ss_pred             EEEECCCHHHHHHHHHHHhCceEEEEEEcCccCccccccccCceEEEEEEEC----CEEEEEecCCCccCcccCCCeeEE
Confidence            35667 9999999999999999888765544          22222333322    23333433333222222 223466


Q ss_pred             EEEEecChHHHHHHHHHHHHhhCCeeeecccccCCCCceEEEEECCCCCeEEEEechh
Q 022831          226 VAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNED  283 (291)
Q Consensus       226 ia~~v~di~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~~  283 (291)
                      |.+.++|+++.++++    .+.|+++..++....+ +.++..++||.|+.|-|.....
T Consensus        81 l~~~~~d~da~f~~a----~~aGa~v~mpl~~~fw-G~r~G~v~D~fGv~W~l~~~~~  133 (136)
T COG2764          81 LDLYVEDVDAVFERA----AAAGATVVMPLEDTFW-GDRYGQVTDPFGVVWMLNTPVE  133 (136)
T ss_pred             EEEEehHHHHHHHHH----HhcCCeEEecchhcCc-ccceEEEECCCCCEEEEecCcc
Confidence            778888999999999    9999999999998887 6799999999999999988654

>cd06588 PhnB_like Escherichia coli PhnB and similar proteins; the E

Probab=99.06  E-value=9.3e-09  Score=76.64  Aligned_cols=110  Identities=16%  Similarity=0.193  Sum_probs=73.5

Q ss_pred             EEEe-CCHHHHHHHHHHhcCCEEEEEec----------cCCCceeeEEeeccCCCcceEEEeeecCCCCcccCCCCceEE
Q 022831           28 VYRV-GDLDRTIKYYTECFGMELLRKRD----------VPEEKYSNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHL   96 (291)
Q Consensus        28 ~l~v-~d~~~~~~FY~~~lG~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~g~~~~~i   96 (291)
                      -|.+ .|.+++++||+++||+++.....          ...+.+....+.++.  ..+.  +......... .+.+..++
T Consensus         4 ~L~~~~~~~eAi~FY~~~fg~~~~~~~~~~~~~~~~~~~~~~~i~ha~l~i~g--~~l~--~~d~~~~~~~-~~~~~~~l   78 (128)
T cd06588           4 YLWFNGNAEEALEFYQSVFGGEITSLTRYGEGPPPDPEEPEGKVMHAELTIGG--QRLM--ASDGGPGFPF-TFGNGISL   78 (128)
T ss_pred             EEeeCCCHHHHHHHHHHHhCCEeEEEEEcCCCCCCCCCCcCCcEEEEEEEECC--EEEE--EEcCCCCCCC-CCCCCEEE
Confidence            4556 89999999999999999987543          122333445555442  2222  2222111111 12234578


Q ss_pred             EEEECC---HHHHHHHHHHcCCeeeeCCccCCCCceEEEEEECCCCcEEEE
Q 022831           97 AIATED---VYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFEL  144 (291)
Q Consensus        97 ~~~v~d---~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dP~G~~iel  144 (291)
                      ++.|+|   +++++++|.+.| ++..++...++|.+. .+++||+|+.|+|
T Consensus        79 ~i~~~~~e~v~~~~~~l~~~g-~~~~~~~~~~~g~~~-~~v~Dp~G~~W~i  127 (128)
T cd06588          79 SVECDSEEEADRLFEALSEGG-TVLMPLQKTFWSPLF-GWVTDRFGVSWQI  127 (128)
T ss_pred             EEECCCHHHHHHHHHHHhcCC-eEeccchhcCccccc-EEEECCCCCEEEe
Confidence            999886   778889987665 888788888888664 8899999999987

coli phnB gene is found next to an operon involved in the cleavage of carbon-phosphorus bonds in unactivated alkylphosphonates. The Escherichia coli phnB gene is found next to an operon of fourteen genes (phnC-to-phnP) related to the cleavage of carbon-phosphorus (C-P) bonds in unactivated alkylphosphonates, supporting bacterial growth on alkylphosphonates as the sole phosphorus source. It was originally considered part of that operon. PhnB appears to play no direct catalytic role in the usage of alkylphosphonate. Although many of the proteins in this family have been annotated as 3-demethylubiquinone-9 3-methyltransferase enzymes by automatic annotation programs, the experimental evidence for this assignment is lacking. In Escherichia coli, the gene coding 3-demethylubiquinone-9 3-methyltransferase enzyme is ubiG, which belongs to the AdoMet-MTase protein family. PhnB-like proteins adopt a structural fold similar to

>cd06588 PhnB_like Escherichia coli PhnB and similar proteins; the E

Probab=99.05  E-value=3.9e-09  Score=78.69  Aligned_cols=111  Identities=14%  Similarity=0.053  Sum_probs=70.3

Q ss_pred             eeee-CCchhhHHHHHHhcCCeeeeeccCc----------ccceeeeeeccCCCCcceEEEEeEecCceeeccCceeeEE
Q 022831          158 MLRV-GDLGRSIKFYEKALGMKLLRTIDSP----------ELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQV  226 (291)
Q Consensus       158 ~l~v-~D~~~~~~Fy~~~lG~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~~hi  226 (291)
                      -|.+ .|.+++.+||+++||+++.......          .+.+....+..+    ...|.+......... ...+..++
T Consensus         4 ~L~~~~~~~eAi~FY~~~fg~~~~~~~~~~~~~~~~~~~~~~~i~ha~l~i~----g~~l~~~d~~~~~~~-~~~~~~~l   78 (128)
T cd06588           4 YLWFNGNAEEALEFYQSVFGGEITSLTRYGEGPPPDPEEPEGKVMHAELTIG----GQRLMASDGGPGFPF-TFGNGISL   78 (128)
T ss_pred             EEeeCCCHHHHHHHHHHHhCCEeEEEEEcCCCCCCCCCCcCCcEEEEEEEEC----CEEEEEEcCCCCCCC-CCCCCEEE
Confidence            3556 8999999999999999987764311          111222223322    123333332211111 12234578


Q ss_pred             EEEecC---hHHHHHHHHHHHHhhCCeeeecccccCCCCceEEEEECCCCCeEEEE
Q 022831          227 AISTDD---VYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLV  279 (291)
Q Consensus       227 a~~v~d---i~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iel~  279 (291)
                      ++.|+|   ++++++++    .+.| ++..+|...++ +.++++++||+|+.|+|.
T Consensus        79 ~i~~~~~e~v~~~~~~l----~~~g-~~~~~~~~~~~-g~~~~~v~Dp~G~~W~i~  128 (128)
T cd06588          79 SVECDSEEEADRLFEAL----SEGG-TVLMPLQKTFW-SPLFGWVTDRFGVSWQIN  128 (128)
T ss_pred             EEECCCHHHHHHHHHHH----hcCC-eEeccchhcCc-ccccEEEECCCCCEEEeC
Confidence            999887   55666666    6655 88888887765 578999999999999983

coli phnB gene is found next to an operon involved in the cleavage of carbon-phosphorus bonds in unactivated alkylphosphonates. The Escherichia coli phnB gene is found next to an operon of fourteen genes (phnC-to-phnP) related to the cleavage of carbon-phosphorus (C-P) bonds in unactivated alkylphosphonates, supporting bacterial growth on alkylphosphonates as the sole phosphorus source. It was originally considered part of that operon. PhnB appears to play no direct catalytic role in the usage of alkylphosphonate. Although many of the proteins in this family have been annotated as 3-demethylubiquinone-9 3-methyltransferase enzymes by automatic annotation programs, the experimental evidence for this assignment is lacking. In Escherichia coli, the gene coding 3-demethylubiquinone-9 3-methyltransferase enzyme is ubiG, which belongs to the AdoMet-MTase protein family. PhnB-like proteins adopt a structural fold similar to

>PF13468 Glyoxalase_3: Glyoxalase-like domain; PDB: 3P8A_B

Probab=99.02  E-value=4.4e-09  Score=82.82  Aligned_cols=147  Identities=25%  Similarity=0.327  Sum_probs=83.6

Q ss_pred             eeeEEEEeCCHHHHHHHHHHhcCCEEEEEeccCCCceeeEEeeccCCCcceEEEeeecCCCCc-------c-----cCCC
Q 022831           24 LLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTS-------Y-----DIGT   91 (291)
Q Consensus        24 i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~-------~-----~~g~   91 (291)
                      |+|+.+.|+|++++.++|++.|||++......+..+.....+.++.   . +||+....+...       +     ..+.
T Consensus         1 lDH~v~~v~dl~~a~~~~~~~lGf~~~~gg~h~~~GT~N~li~f~~---~-YlEli~i~~~~~~~~~~~~~~~~~~~~~~   76 (175)
T PF13468_consen    1 LDHLVIAVRDLDAAVERFEQRLGFTVTPGGEHPGWGTANALIPFGD---G-YLELIAIDPEAPAPDRGRWFGLDRLAGGE   76 (175)
T ss_dssp             EEEEEEE-TTGGG----GGGS--S--EEEEE-TTT-EEEEEEE-SS---S-EEEEEEES-HHHSTGGGT-TTTHHHHT--
T ss_pred             CCEEEEEcCCHHHHHHhhhhcceEeecCCCcCCCCccEEEEEeeCC---c-eEEEEEeCCcccccccccceechhhcCCC
Confidence            7899999999999999997789999998777766566677776643   2 566665322111       0     1467


Q ss_pred             CceEEEEEECCHHHHHHHHHHcCCeeeeCCccCCCCc--eEEEEEECC----CCcEEEEEecC-CC------C---CCce
Q 022831           92 GFGHLAIATEDVYKMVENIRAKGGNVTREPGPLKGMT--THFAFVKDP----DGYIFELIQRG-PT------P---EPLC  155 (291)
Q Consensus        92 ~~~~i~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~g~--~~~~~~~dP----~G~~iel~~~~-~~------~---~~~~  155 (291)
                      |+..+|+.++|+++..++|.+.|+... .+...+++.  ...++..+.    .+..-.+++.. +.      +   .+|.
T Consensus        77 g~~~~~l~t~d~~~~~~~l~~~G~~~~-~r~~~dG~~~~w~~~~~~~~~~p~~~~~Pf~i~~~~~~~~~~~h~ng~~~i~  155 (175)
T PF13468_consen   77 GLYGWALRTDDIEAVAARLRAAGLDAG-SRVRPDGGDLRWRLAFPEDGALPFGGLLPFFIQWETPHPEWARHPNGALGIT  155 (175)
T ss_dssp             EEEEEEEE-S-HHHHHHHHHTTT-EEE-EEEEEEE-EEEEEEEEEE-SS---SS---EEEEESS-CCHHTTT--TTEEEE
T ss_pred             CeEEEEEecCCHHHHHHHHHhcCCCCC-CcCcCCCCcceEEEEEeCCcccccCCCCcEEEEeCCCCcccccCCCccceEE
Confidence            889999999999999999999998621 112112221  123444553    23444555332 22      1   3589


Q ss_pred             eeeeeeCCchhhHHHHHHhc
Q 022831          156 QVMLRVGDLGRSIKFYEKAL  175 (291)
Q Consensus       156 hv~l~v~D~~~~~~Fy~~~l  175 (291)
                      ++.+.++|.+++.++|.++|
T Consensus       156 ~v~i~~~d~~~~~~~~~~l~  175 (175)
T PF13468_consen  156 RVVIAVPDPDAAAARYARLL  175 (175)
T ss_dssp             EEEEEETTHHHHHHHHHHH-
T ss_pred             EEEEEeCCHHHHHHHHHhhC
Confidence            99999999999999999875

>COG3565 Predicted dioxygenase of extradiol dioxygenase family [General function prediction only]

Probab=98.98  E-value=7.6e-09  Score=71.99  Aligned_cols=116  Identities=25%  Similarity=0.260  Sum_probs=71.7

Q ss_pred             ceeeEEEEeCCHHHHHHHHHHhcCCEEEEEeccCCCceeeEEeeccCCCcceEEEeeecCCCC-c-ccCCC--CceE--E
Q 022831           23 RLLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVT-S-YDIGT--GFGH--L   96 (291)
Q Consensus        23 ~i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~-~-~~~g~--~~~~--i   96 (291)
                      -+=|+.|.|+|++++++||.++||.+.-.+.+.      .+-+.+  .+..+..-+......+ . .-.|.  -..|  +
T Consensus         4 ~~FHLA~pV~Dl~~tr~FYgevlG~~~GRstd~------wvdfDf--yGHQ~v~Hl~~q~~~~~~g~V~~~~v~~pHfGv   75 (138)
T COG3565           4 VPFHLAIPVNDLDETRRFYGEVLGCKEGRSTDT------WVDFDF--YGHQVVAHLTPQPDSQGSGKVDGHGVPPPHFGV   75 (138)
T ss_pred             cceEEeeeccccHHHHhhhhhhcccccccccce------EEEeee--cccEEEEEecCCcccccCcccCCCCCCCccceE
Confidence            457999999999999999999999976322111      111211  1122222222211111 0 01122  2234  5


Q ss_pred             EEEECCHHHHHHHHHHcCCeeeeCCccCC---CCceEEEEEECCCCcEEEEEe
Q 022831           97 AIATEDVYKMVENIRAKGGNVTREPGPLK---GMTTHFAFVKDPDGYIFELIQ  146 (291)
Q Consensus        97 ~~~v~d~~~~~~~l~~~G~~~~~~~~~~~---~g~~~~~~~~dP~G~~iel~~  146 (291)
                      .+.++|.-++.+||+++|+....+|.-.-   -|.....|+.||.||.+|+-.
T Consensus        76 Vl~~edW~alaerlea~gi~~~i~P~vRF~Ge~gEq~TlFl~DP~gN~lEfK~  128 (138)
T COG3565          76 VLPVEDWFALAERLEAAGIPFHIPPKVRFKGEPGEQRTLFLFDPSGNALEFKG  128 (138)
T ss_pred             EEEHHHHHHHHHHHHHcCCCcccCceEEecCCccceEEEEEECCCCCeeeeec
Confidence            67788999999999999998776664332   123345789999999999853

>COG2764 PhnB Uncharacterized protein conserved in bacteria [Function unknown]

Probab=98.98  E-value=4.8e-08  Score=72.30  Aligned_cols=117  Identities=21%  Similarity=0.199  Sum_probs=85.2

Q ss_pred             EEEeC-CHHHHHHHHHHhcCCEEEEEeccCC----------CceeeEEeeccCCCcceEEEeeecCCCCcccCCC-CceE
Q 022831           28 VYRVG-DLDRTIKYYTECFGMELLRKRDVPE----------EKYSNAFLGFGPEQSYFVVELTYNYGVTSYDIGT-GFGH   95 (291)
Q Consensus        28 ~l~v~-d~~~~~~FY~~~lG~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~g~-~~~~   95 (291)
                      -|..+ |.+++++||+++||.++......++          +...++-+.++  +..  |.+....+......+. .-..
T Consensus         5 Yl~f~gn~~~Al~fY~~vFgae~~~~~~~~d~~~~~~~~~~~~i~HA~l~i~--g~~--im~sd~~~~~~~~~~~~~s~~   80 (136)
T COG2764           5 YLFFNGNAREALAFYKEVFGAEELKRVPFGDMPSSAGEPPGGRIMHAELRIG--GST--IMLSDAFPDMGATEGGGTSLS   80 (136)
T ss_pred             EEEECCCHHHHHHHHHHHhCceEEEEEEcCccCccccccccCceEEEEEEEC--CEE--EEEecCCCccCcccCCCeeEE
Confidence            35667 9999999999999999988766665          45555666654  222  2222222211122222 3346


Q ss_pred             EEEEECCHHHHHHHHHHcCCeeeeCCccCCCCceEEEEEECCCCcEEEEEecCC
Q 022831           96 LAIATEDVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFELIQRGP  149 (291)
Q Consensus        96 i~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dP~G~~iel~~~~~  149 (291)
                      |.+.+.|++++.+++.+.|+++..+..+..||.+. ..++||.|+.|-|.....
T Consensus        81 l~~~~~d~da~f~~a~~aGa~v~mpl~~~fwG~r~-G~v~D~fGv~W~l~~~~~  133 (136)
T COG2764          81 LDLYVEDVDAVFERAAAAGATVVMPLEDTFWGDRY-GQVTDPFGVVWMLNTPVE  133 (136)
T ss_pred             EEEEehHHHHHHHHHHhcCCeEEecchhcCcccce-EEEECCCCCEEEEecCcc
Confidence            78888899999999999999999999999998774 789999999999876543

>PF14506 CppA_N: CppA N-terminal; PDB: 3E0R_D

Probab=98.97  E-value=2.8e-08  Score=70.17  Aligned_cols=113  Identities=24%  Similarity=0.387  Sum_probs=67.1

Q ss_pred             eeEEEEeCCHHHHHHHHHHhcCCEEEEEeccCCCceeeEEeeccCCCcceEEEeeecCCCCcccCCCCceEEEEEECCHH
Q 022831           25 LHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHLAIATEDVY  104 (291)
Q Consensus        25 ~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~g~~~~~i~~~v~d~~  104 (291)
                      .+-.|.|.|-+...+||+++|||++...+..      .++++.......++|+-++............+..+.+.|++..
T Consensus         2 ~~PvlRVnnR~~ni~FY~~~LGfkll~EEna------~a~lg~~~~~erlvlEESP~~rtr~V~G~KKl~~ivIkv~~~~   75 (125)
T PF14506_consen    2 IIPVLRVNNRDLNIDFYQKTLGFKLLSEENA------LAILGDQQKEERLVLEESPSMRTRAVEGPKKLNRIVIKVPNPK   75 (125)
T ss_dssp             EEEEEEESSHHHHHHHHTTTT--EEEEEETT------EEEEE-TT--EEEEEEE--TTT-B--SSS-SEEEEEEEESSHH
T ss_pred             cCceEEEcCHHHhHHHHHhccCcEEeecccc------EEEecCCCCceEEEEecCCccccccccCcceeeEEEEEcCCHH
Confidence            4568999999999999999999999886542      6777764445566666655444445555568899999999987


Q ss_pred             HHHHHHHHcCCeeeeCCccCCCCceEEEE-EECCCCcEEEEEecC
Q 022831          105 KMVENIRAKGGNVTREPGPLKGMTTHFAF-VKDPDGYIFELIQRG  148 (291)
Q Consensus       105 ~~~~~l~~~G~~~~~~~~~~~~g~~~~~~-~~dP~G~~iel~~~~  148 (291)
                      + ++.|.++|.++... .  .+ ...++| ..+|+|..|.++...
T Consensus        76 E-Ie~LLar~~~~~~l-~--kg-~~gyAfe~vSPEgd~~llhaEd  115 (125)
T PF14506_consen   76 E-IEALLARGAQYDRL-Y--KG-KNGYAFEAVSPEGDRFLLHAED  115 (125)
T ss_dssp             H-HHHHHHC-S--SEE-E--E--SSSEEEEEE-TT--EEEEE--S
T ss_pred             H-HHHHHhccccccee-E--Ec-CCceEEEEECCCCCEEEEEEcC
Confidence            7 46677777663321 1  12 222355 689999999987553

>COG3607 Predicted lactoylglutathione lyase [General function prediction only]

Probab=98.96  E-value=9.2e-09  Score=72.92  Aligned_cols=117  Identities=18%  Similarity=0.280  Sum_probs=74.2

Q ss_pred             cceeeEEEEeCCHHHHHHHHHHhcCCEEEEEeccCCCceeeEEeeccCCCcceEEEeeecCCCCcc-------cCCCCce
Q 022831           22 RRLLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTSY-------DIGTGFG   94 (291)
Q Consensus        22 ~~i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~-------~~g~~~~   94 (291)
                      ++...|+|.|+|++++++||+. |||+.-.......    ..++-.+. .  +.+.|.....-+.+       .....-.
T Consensus         2 ~~mIFvNLPVkDL~~S~~Fy~a-lGfk~Npq~sde~----a~~mi~~~-n--i~vMLL~~~~fq~F~~~~i~dt~~s~ev   73 (133)
T COG3607           2 TQMIFVNLPVKDLEASKAFYTA-LGFKFNPQFSDED----AACMIISD-N--IFVMLLEEARFQTFTKRQIADTTKSREV   73 (133)
T ss_pred             ceEEEEecchhhHHHHHHHHHH-hCcccCCCccccc----ceeEEEec-c--EEEEEeccHHhhhhcccccccccCCceE
Confidence            3557899999999999999988 9999854322211    11121111 2  22222222111111       1122445


Q ss_pred             EEEEEECC---HHHHHHHHHHcCCeeeeCCccCCCCceEEEEEECCCCcEEEEEecC
Q 022831           95 HLAIATED---VYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFELIQRG  148 (291)
Q Consensus        95 ~i~~~v~d---~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dP~G~~iel~~~~  148 (291)
                      .||+.+.+   ++++.++..++|+++..++.....-++  ..|.||||+.||++.-.
T Consensus        74 li~ls~~s~eevd~~v~ka~eaGGk~~~~~~d~gfMYg--~~fqDpDGh~wE~l~m~  128 (133)
T COG3607          74 LISLSAGSREEVDELVDKALEAGGKPANEPQDEGFMYG--RSFQDPDGHVWEFLWMD  128 (133)
T ss_pred             EEEeccCcHHHHHHHHHHHHHcCCCCCCCccccccccc--eeeeCCCCCeEEEEEeC
Confidence            68888864   888999999999998777665544322  45899999999998643

>COG0346 GloA Lactoylglutathione lyase and related lyases [Amino acid transport and metabolism]

Probab=98.96  E-value=3.8e-09  Score=78.47  Aligned_cols=122  Identities=22%  Similarity=0.356  Sum_probs=73.1

Q ss_pred             cceeeEEEEeCCHHHHHHHHHHhcCCEEEEEeccCCCce---eeEEeeccCCCcceEEEe--------eecCCCC-cccC
Q 022831           22 RRLLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKY---SNAFLGFGPEQSYFVVEL--------TYNYGVT-SYDI   89 (291)
Q Consensus        22 ~~i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~l~l--------~~~~~~~-~~~~   89 (291)
                      ++++||.+.|+|++++++||+++||+++...........   ...+..............        ....... ....
T Consensus         1 ~~l~hv~l~v~dl~~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (138)
T COG0346           1 MGIHHVTLAVPDLEASIDFYTDVLGLRLVKDTVNEADDGGGYHLLFLDGDGGPGELLAFFGFEGRAGTGFVGDVALGVPG   80 (138)
T ss_pred             CceEEEEEeeCCHhHhHHHHHhhcCCeeeeecccccCCceEEEEEeccCCCCcccceeecccccccccccccceEEeecC
Confidence            478999999999999999999999999987654332211   111111100000000000        0000000 0111


Q ss_pred             C-CCceEEEEEECC---HHHHHHHHHHcCCeeeeCCccCCCCceEEEEEECCCCcEEEEEe
Q 022831           90 G-TGFGHLAIATED---VYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFELIQ  146 (291)
Q Consensus        90 g-~~~~~i~~~v~d---~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dP~G~~iel~~  146 (291)
                      + .+..|+++.+++   ...........|..+..... ..++.  .+|++||||+.||+.+
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~-~~~~~--~~~~~dp~g~~~e~~~  138 (138)
T COG0346          81 GDLGLGHLAFEVDDEAFGDAALAFLDPDGVRIELGEP-GRGGV--HVYFRDPDGILIELAT  138 (138)
T ss_pred             chhccCceeEecccccccceEEEeeCCCCCEEEeecC-CCcce--EEEEECCCCcEEEeeC
Confidence            1 246789999998   66667777778888654433 22322  5899999999999863

>COG3607 Predicted lactoylglutathione lyase [General function prediction only]

Probab=98.95  E-value=1e-08  Score=72.64  Aligned_cols=114  Identities=25%  Similarity=0.232  Sum_probs=71.9

Q ss_pred             CceeeeeeeCCchhhHHHHHHhcCCeeeeeccCcccceeeeeeccCCCCcceEEEEeEec-------CceeeccCceeeE
Q 022831          153 PLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSY-------GVTEYTKGNAYAQ  225 (291)
Q Consensus       153 ~~~hv~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~-------~~~~~~~~~g~~h  225 (291)
                      +...|.|.|.|++++.+||+. |||+......+..   ...++-. +   ...+.|....       ..........-..
T Consensus         3 ~mIFvNLPVkDL~~S~~Fy~a-lGfk~Npq~sde~---a~~mi~~-~---ni~vMLL~~~~fq~F~~~~i~dt~~s~evl   74 (133)
T COG3607           3 QMIFVNLPVKDLEASKAFYTA-LGFKFNPQFSDED---AACMIIS-D---NIFVMLLEEARFQTFTKRQIADTTKSREVL   74 (133)
T ss_pred             eEEEEecchhhHHHHHHHHHH-hCcccCCCccccc---ceeEEEe-c---cEEEEEeccHHhhhhcccccccccCCceEE
Confidence            356789999999999999966 9999877654332   1111110 0   1222222210       0001122345578


Q ss_pred             EEEEecC---hHHHHHHHHHHHHhhCCeeeecccccCCCCceEEEEECCCCCeEEEEe
Q 022831          226 VAISTDD---VYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVD  280 (291)
Q Consensus       226 ia~~v~d---i~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iel~~  280 (291)
                      ++|.+.+   +|+++.+.    .+.|++...+|.....  -+-.-|.|||||.||++=
T Consensus        75 i~ls~~s~eevd~~v~ka----~eaGGk~~~~~~d~gf--MYg~~fqDpDGh~wE~l~  126 (133)
T COG3607          75 ISLSAGSREEVDELVDKA----LEAGGKPANEPQDEGF--MYGRSFQDPDGHVWEFLW  126 (133)
T ss_pred             EEeccCcHHHHHHHHHHH----HHcCCCCCCCcccccc--ccceeeeCCCCCeEEEEE
Confidence            8998875   77777777    9999998666654332  233558999999999975

>COG3565 Predicted dioxygenase of extradiol dioxygenase family [General function prediction only]

Probab=98.94  E-value=8.5e-09  Score=71.75  Aligned_cols=119  Identities=19%  Similarity=0.230  Sum_probs=75.6

Q ss_pred             ceeeeeeeCCchhhHHHHHHhcCCeeeeeccCcccceeeeeeccCCCCcceEEEEeEecCceeec--cCc--eeeEE--E
Q 022831          154 LCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYT--KGN--AYAQV--A  227 (291)
Q Consensus       154 ~~hv~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~--~~~--g~~hi--a  227 (291)
                      +-|+.+.|+|++++++||.++||.+..+..+.   -....+++.     ....-+....+.....  .+.  -.-|+  -
T Consensus         5 ~FHLA~pV~Dl~~tr~FYgevlG~~~GRstd~---wvdfDfyGH-----Q~v~Hl~~q~~~~~~g~V~~~~v~~pHfGvV   76 (138)
T COG3565           5 PFHLAIPVNDLDETRRFYGEVLGCKEGRSTDT---WVDFDFYGH-----QVVAHLTPQPDSQGSGKVDGHGVPPPHFGVV   76 (138)
T ss_pred             ceEEeeeccccHHHHhhhhhhcccccccccce---EEEeeeccc-----EEEEEecCCcccccCcccCCCCCCCccceEE
Confidence            67999999999999999999999997654321   112233331     2222332221111000  111  22344  4


Q ss_pred             EEecChHHHHHHHHHHHHhhCCeeeeccccc---CCCCceEEEEECCCCCeEEEEechhh
Q 022831          228 ISTDDVYKSAEVVNLVTQELGGKITRQPGPI---PGLNTKITSFVDPDGWKTVLVDNEDF  284 (291)
Q Consensus       228 ~~v~di~~~~~~l~~~~~~~G~~~~~~p~~~---~~~~~~~~~~~DPdG~~iel~~~~~~  284 (291)
                      |.++|-.++.++|    ++.|+.+..+|.-.   ..+-.+.+++.||+||.+|+-...++
T Consensus        77 l~~edW~alaerl----ea~gi~~~i~P~vRF~Ge~gEq~TlFl~DP~gN~lEfK~fR~~  132 (138)
T COG3565          77 LPVEDWFALAERL----EAAGIPFHIPPKVRFKGEPGEQRTLFLFDPSGNALEFKGFRDQ  132 (138)
T ss_pred             EEHHHHHHHHHHH----HHcCCCcccCceEEecCCccceEEEEEECCCCCeeeeecccch
Confidence            6677888888888    99999988888632   22235789999999999998654443

>COG0346 GloA Lactoylglutathione lyase and related lyases [Amino acid transport and metabolism]

Probab=98.92  E-value=6e-09  Score=77.37  Aligned_cols=121  Identities=23%  Similarity=0.257  Sum_probs=73.0

Q ss_pred             CceeeeeeeCCchhhHHHHHHhcCCeeeeeccCcccc---eeeeeeccCCCCcceEEEE--------eEecCce-eeccC
Q 022831          153 PLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELK---CALAMLGYAEEDQTTVLEL--------AYSYGVT-EYTKG  220 (291)
Q Consensus       153 ~~~hv~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~l~l--------~~~~~~~-~~~~~  220 (291)
                      ++.|+.+.|+|++++.+||+++||++...........   ....+..............        ....... .....
T Consensus         2 ~l~hv~l~v~dl~~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (138)
T COG0346           2 GIHHVTLAVPDLEASIDFYTDVLGLRLVKDTVNEADDGGGYHLLFLDGDGGPGELLAFFGFEGRAGTGFVGDVALGVPGG   81 (138)
T ss_pred             ceEEEEEeeCCHhHhHHHHHhhcCCeeeeecccccCCceEEEEEeccCCCCcccceeecccccccccccccceEEeecCc
Confidence            5789999999999999999999999988765432211   1112211110000000000        0000000 01111


Q ss_pred             -ceeeEEEEEecC---hHHHHHHHHHHHHhhCCeeeecccccCCCCceEEEEECCCCCeEEEEe
Q 022831          221 -NAYAQVAISTDD---VYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVD  280 (291)
Q Consensus       221 -~g~~hia~~v~d---i~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iel~~  280 (291)
                       .+..|+++.+++   ........    ...|..+...+. ...  +..+|++||||+.||+++
T Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~----~~~G~~~~~~~~-~~~--~~~~~~~dp~g~~~e~~~  138 (138)
T COG0346          82 DLGLGHLAFEVDDEAFGDAALAFL----DPDGVRIELGEP-GRG--GVHVYFRDPDGILIELAT  138 (138)
T ss_pred             hhccCceeEecccccccceEEEee----CCCCCEEEeecC-CCc--ceEEEEECCCCcEEEeeC
Confidence             257899999998   55666666    777888766544 222  338999999999999974

>PLN02875 4-hydroxyphenylpyruvate dioxygenase

Probab=98.88  E-value=1.6e-08  Score=88.36  Aligned_cols=101  Identities=22%  Similarity=0.316  Sum_probs=73.5

Q ss_pred             CCccceeeEEEEeCCHHHHHHHHHHhcCCEEEEEeccCCC-----ceeeEEeeccCCCcceEEEeeecCCC----C---c
Q 022831           19 KDKRRLLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEE-----KYSNAFLGFGPEQSYFVVELTYNYGV----T---S   86 (291)
Q Consensus        19 ~~~~~i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~l~l~~~~~~----~---~   86 (291)
                      ..+.+|+||++.|++++.+..||+++|||+.....+.++-     +.....+..+  ...+.++|..+...    +   .
T Consensus       176 ~gl~~IDHi~iaV~~ld~a~~fY~~vlGf~~~~~~d~~~i~~~~sgl~S~vl~sp--~g~v~ipLnEP~~~~~~~SqI~e  253 (398)
T PLN02875        176 YGLRRLDHAVGNVPNLLPAVNYIAGFTGFHEFAEFTAEDVGTVDSGLNSMVLASN--NEMVLLPLNEPTFGTKRKSQIQT  253 (398)
T ss_pred             CCcceeCcceechhhHHHHHHHHHHhcCCeeeeeeccccccccccceEEEEEEcC--CCcEEEEeccCCCCCCCcChHHH
Confidence            3578999999999999999999999999998765443221     2234444432  33456666654321    1   1


Q ss_pred             ---ccCCCCceEEEEEECCHHHHHHHHHHc----CCeeeeCC
Q 022831           87 ---YDIGTGFGHLAIATEDVYKMVENIRAK----GGNVTREP  121 (291)
Q Consensus        87 ---~~~g~~~~~i~~~v~d~~~~~~~l~~~----G~~~~~~~  121 (291)
                         ...|.|++||||.|+|+.++.++|+++    |++.+..|
T Consensus       254 FL~~~~G~GIQHIAl~tdDI~~av~~Lra~~~~~Gv~fL~~P  295 (398)
T PLN02875        254 YLEHNEGPGLQHLALKSDDIFGTLREMRARSHIGGFEFMPPP  295 (398)
T ss_pred             HHHhcCCCCeeEEEeecCCHHHHHHHHHhccccCCeecCCCC
Confidence               235789999999999999999999999    98877543

>PF14696 Glyoxalase_5: Hydroxyphenylpyruvate dioxygenase, HPPD, N-terminal ; PDB: 1CJX_A 2R5V_A

Probab=98.73  E-value=5.7e-08  Score=72.26  Aligned_cols=122  Identities=13%  Similarity=0.163  Sum_probs=79.9

Q ss_pred             CCccceeeEEEEeCCHHHHHHHHHHhcCCEEEEEeccCCCceeeEEeeccCCCcceEEEeeecCCC-Cc--ccCCCCceE
Q 022831           19 KDKRRLLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGV-TS--YDIGTGFGH   95 (291)
Q Consensus        19 ~~~~~i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~-~~--~~~g~~~~~   95 (291)
                      +.+.++++|.+.++|.++...+++ .|||+.+.+....    ....+.  .+...++|.-. +... ..  ..+|++++.
T Consensus         5 ~g~~G~dFvEFa~~~~~~l~~~~~-~lGF~~~a~hrsk----~v~l~r--QG~I~~vln~e-p~s~a~~~~~~HG~sv~a   76 (139)
T PF14696_consen    5 LGLDGFDFVEFAVPDAQALAQLFT-ALGFQPVARHRSK----DVTLYR--QGDINFVLNSE-PDSFAAEFAAQHGPSVCA   76 (139)
T ss_dssp             T-EEEEEEEEEE-SSTTSCHHHHC-CCCEEEECCECCC----SEEEEE--ETTEEEEEEEE-STSCHHHHHHHHSSEEEE
T ss_pred             CCCCCeEEEEEecCCHHHHHHHHH-HhCcceEEecCCc----ceEEEE--eCCEEEEEeCC-CcchHHHHHHhcCCEEEE
Confidence            678999999999999888888886 5999998754222    244444  33555555332 1111 11  237889999


Q ss_pred             EEEEECCHHHHHHHHHHcCCeeeeCCccCCCCceEEEEEECCCCcEEEEEecCCC
Q 022831           96 LAIATEDVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFELIQRGPT  150 (291)
Q Consensus        96 i~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dP~G~~iel~~~~~~  150 (291)
                      |+|+|+|.++++++..++|++...++...  +...+.-++.+.|.++.|++....
T Consensus        77 iafrV~Da~~A~~rA~~~GA~~~~~~~~~--~e~~~paI~g~G~sl~yfVdr~~~  129 (139)
T PF14696_consen   77 IAFRVDDAAAAYERAVALGAEPVQEPTGP--GELNIPAIRGIGGSLHYFVDRYGD  129 (139)
T ss_dssp             EEEEES-HHHHHHHHHHTT--EEEEEEET--T-BEEEEEE-CCC-EEEEEE--SS
T ss_pred             EEEEeCCHHHHHHHHHHcCCcCcccCCCC--CcEeeeeEEccCCCEEEEEecCCC
Confidence            99999999999999999999977654322  234456789999999999988644

>PRK01037 trmD tRNA (guanine-N(1)-)-methyltransferase/unknown domain fusion protein; Reviewed

Probab=98.64  E-value=3e-07  Score=77.78  Aligned_cols=107  Identities=22%  Similarity=0.313  Sum_probs=70.7

Q ss_pred             cceeeEEEEeCCHHHHHHHHHHhcCCEEEEEeccCCCceeeEEeeccCCCcceEEEeeecCCCCcccCCCCceEEEEEEC
Q 022831           22 RRLLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHLAIATE  101 (291)
Q Consensus        22 ~~i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~g~~~~~i~~~v~  101 (291)
                      -+..||+|.|+|++++++||+.+||+.. ..    ++.  ...+  +  +.-+.+-+.+. ..    ......-+|+.++
T Consensus       246 ~~~IfVNLpV~DL~rS~~FYt~LF~~n~-Fs----de~--a~cm--~--dtI~vMllt~~-D~----~~~~evLl~Ls~~  309 (357)
T PRK01037        246 PKTFSVVLEVQDLRRAKKFYSKMFGLEC-WD----GDK--LFLL--G--KTSLYLQQTKA-EK----KNRGTTTLSLELE  309 (357)
T ss_pred             CceEEEEeeeCCHHHHHHHHHHHhCCCC-CC----CCc--cccc--c--CcEEEEEecCC-CC----CCcceEEEEeccC
Confidence            4567999999999999999999988864 22    111  1222  2  21222222222 11    1224456888887


Q ss_pred             C---HHHHHHHHHHcCCeeeeCCccCCCCceEEEEEECCCCcEEEEEecC
Q 022831          102 D---VYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFELIQRG  148 (291)
Q Consensus       102 d---~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dP~G~~iel~~~~  148 (291)
                      +   ++++.++..++|++...++.+... .   --|.||||+.||++...
T Consensus       310 Sre~VD~lv~~A~aaGG~~~~~~~D~Gf-~---rsf~D~DGH~WEi~~~~  355 (357)
T PRK01037        310 CEHDFVRFLRRWEMLGGELGEQADGHFP-L---RLVFDLDGHIWVVSCVQ  355 (357)
T ss_pred             CHHHHHHHHHHHHHcCCCCCCCcccccC-c---ceeECCCCCEEEEEEEe
Confidence            5   888899999999986555555444 2   34899999999998653

>PRK01037 trmD tRNA (guanine-N(1)-)-methyltransferase/unknown domain fusion protein; Reviewed

Probab=98.60  E-value=3.8e-07  Score=77.13  Aligned_cols=105  Identities=22%  Similarity=0.272  Sum_probs=69.6

Q ss_pred             CCceeeeeeeCCchhhHHHHHHhcCCeeeeeccCcccceeeeeeccCCCCcceEEEEeEecCceeeccCceeeEEEEEec
Q 022831          152 EPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAISTD  231 (291)
Q Consensus       152 ~~~~hv~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~~hia~~v~  231 (291)
                      .+..||+|.|.|+++|++||+++|++.. ..  ++.   .. .++  .   .....+....+.    ....-..++|.++
T Consensus       246 ~~~IfVNLpV~DL~rS~~FYt~LF~~n~-Fs--de~---a~-cm~--d---tI~vMllt~~D~----~~~~evLl~Ls~~  309 (357)
T PRK01037        246 PKTFSVVLEVQDLRRAKKFYSKMFGLEC-WD--GDK---LF-LLG--K---TSLYLQQTKAEK----KNRGTTTLSLELE  309 (357)
T ss_pred             CceEEEEeeeCCHHHHHHHHHHHhCCCC-CC--CCc---cc-ccc--C---cEEEEEecCCCC----CCcceEEEEeccC
Confidence            4578999999999999999999999885 22  111   11 121  1   122222222211    2335577889888


Q ss_pred             C---hHHHHHHHHHHHHhhCCeeeecccccCCCCceEEEEECCCCCeEEEEe
Q 022831          232 D---VYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVD  280 (291)
Q Consensus       232 d---i~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iel~~  280 (291)
                      +   +|+++++.    .++|++...+|..+..    .--|.|||||.||++-
T Consensus       310 Sre~VD~lv~~A----~aaGG~~~~~~~D~Gf----~rsf~D~DGH~WEi~~  353 (357)
T PRK01037        310 CEHDFVRFLRRW----EMLGGELGEQADGHFP----LRLVFDLDGHIWVVSC  353 (357)
T ss_pred             CHHHHHHHHHHH----HHcCCCCCCCcccccC----cceeECCCCCEEEEEE
Confidence            5   67777777    9999977665554443    3458999999999984

>PRK10148 hypothetical protein; Provisional

Probab=98.46  E-value=5.3e-06  Score=63.11  Aligned_cols=118  Identities=17%  Similarity=0.126  Sum_probs=72.0

Q ss_pred             eeeeC-CchhhHHHHHHhcCCeeeeecc---Cc-----------------ccceeeeeeccCCCCcceEEEEeEecCcee
Q 022831          158 MLRVG-DLGRSIKFYEKALGMKLLRTID---SP-----------------ELKCALAMLGYAEEDQTTVLELAYSYGVTE  216 (291)
Q Consensus       158 ~l~v~-D~~~~~~Fy~~~lG~~~~~~~~---~~-----------------~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~  216 (291)
                      -|..+ |.+++.+||+++||..+.....   .+                 ++.+....+..+    ...|.+......  
T Consensus         6 yL~f~g~a~eAi~FY~~~Fgae~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~Ha~l~i~----g~~lm~sD~~~~--   79 (147)
T PRK10148          6 YLSFAGNCADAIAYYQQTLGAELLYKISFGEMPKSAQDSEEGCPSGMQFPDTAIAHANVRIA----GSDIMMSDAIPS--   79 (147)
T ss_pred             EEEeCCCHHHHHHHHHHHhCCEEEEEEEcccCCccccccccCCCccccCcCCcEEEEEEEEC----CEEEEEECCCCC--
Confidence            35554 8999999999999988764431   10                 111222223322    122222221111  


Q ss_pred             eccCceeeEEEEEecChHHHHHHHHHHHHhhCCeeeecccccCCCCceEEEEECCCCCeEEEEechhh
Q 022831          217 YTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNEDF  284 (291)
Q Consensus       217 ~~~~~g~~hia~~v~di~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~~~  284 (291)
                      ......-.++.+.++|.+++.+..+.  .+.|+++..++...++ +.++..++||.|+.|.|...+..
T Consensus        80 ~~~~~~~~~l~l~~~d~ee~~~~~~a--La~gg~v~mpl~~~~w-g~~~g~v~D~fGi~W~l~~~~~~  144 (147)
T PRK10148         80 GKAHYSGFTLVLDTQDVEEGKRWFDN--LAANGKIEMAWQETFW-AHGFGKVTDKFGVPWMINVVKQQ  144 (147)
T ss_pred             cCCCCCeEEEEEECCCHHHHHHHHHH--hhCCCEEEecchhcch-hhccEEEECCCCCEEEEEecCCC
Confidence            01111245778888887764333322  3689999999988876 57899999999999999886543

>PRK10148 hypothetical protein; Provisional

Probab=98.42  E-value=2.8e-05  Score=59.20  Aligned_cols=116  Identities=20%  Similarity=0.200  Sum_probs=75.7

Q ss_pred             EEEeC-CHHHHHHHHHHhcCCEEEEEec---c-----------------CCCceeeEEeeccCCCcceEEEeeecCCCCc
Q 022831           28 VYRVG-DLDRTIKYYTECFGMELLRKRD---V-----------------PEEKYSNAFLGFGPEQSYFVVELTYNYGVTS   86 (291)
Q Consensus        28 ~l~v~-d~~~~~~FY~~~lG~~~~~~~~---~-----------------~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~   86 (291)
                      -|... |.+++.+||+++||.++.....   .                 +++.+.++.+.++.  ..  +.+..... ..
T Consensus         6 yL~f~g~a~eAi~FY~~~Fgae~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~Ha~l~i~g--~~--lm~sD~~~-~~   80 (147)
T PRK10148          6 YLSFAGNCADAIAYYQQTLGAELLYKISFGEMPKSAQDSEEGCPSGMQFPDTAIAHANVRIAG--SD--IMMSDAIP-SG   80 (147)
T ss_pred             EEEeCCCHHHHHHHHHHHhCCEEEEEEEcccCCccccccccCCCccccCcCCcEEEEEEEECC--EE--EEEECCCC-Cc
Confidence            34444 8999999999999998865421   1                 12444455666542  22  22222111 11


Q ss_pred             ccCCCCceEEEEEECCHHH---HHHHHHHcCCeeeeCCccCCCCceEEEEEECCCCcEEEEEecCCCC
Q 022831           87 YDIGTGFGHLAIATEDVYK---MVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFELIQRGPTP  151 (291)
Q Consensus        87 ~~~g~~~~~i~~~v~d~~~---~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dP~G~~iel~~~~~~~  151 (291)
                      ...+ ...++++.++|.++   +.++| +.|+++..++.+..+|.+ +..++||-|+.|.|...+..|
T Consensus        81 ~~~~-~~~~l~l~~~d~ee~~~~~~aL-a~gg~v~mpl~~~~wg~~-~g~v~D~fGi~W~l~~~~~~~  145 (147)
T PRK10148         81 KAHY-SGFTLVLDTQDVEEGKRWFDNL-AANGKIEMAWQETFWAHG-FGKVTDKFGVPWMINVVKQQP  145 (147)
T ss_pred             CCCC-CeEEEEEECCCHHHHHHHHHHh-hCCCEEEecchhcchhhc-cEEEECCCCCEEEEEecCCCC
Confidence            1111 24577888889776   45555 588999999999899866 488999999999998765443

>COG3185 4-hydroxyphenylpyruvate dioxygenase and related hemolysins [Amino acid transport and metabolism / General function prediction only]

Probab=98.35  E-value=1.3e-06  Score=73.40  Aligned_cols=100  Identities=21%  Similarity=0.313  Sum_probs=72.5

Q ss_pred             CccceeeEEEEeC--CHHHHHHHHHHhcCCEEEEEeccCCC--ceeeEEeeccCCCcceEEEeeecCCCCc-------cc
Q 022831           20 DKRRLLHAVYRVG--DLDRTIKYYTECFGMELLRKRDVPEE--KYSNAFLGFGPEQSYFVVELTYNYGVTS-------YD   88 (291)
Q Consensus        20 ~~~~i~hv~l~v~--d~~~~~~FY~~~lG~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~l~~~~~~~~-------~~   88 (291)
                      .+..|+|++..|.  .++.+..||+++|||+.....+.++.  +...--+.  +....+.|.|..+...++       ..
T Consensus       164 g~~~IDHl~~nv~~~~md~w~~FY~~if~~~~~~~fdi~~p~tgl~Sram~--Sp~G~vrlplN~s~~~~sqi~efl~~y  241 (363)
T COG3185         164 GLTAIDHLTHNVKAGQMDTWVLFYESLFGFREIQYFDIPGPITGLRSRAMV--SPCGKVRLPLNESADDKSQIGEFLREY  241 (363)
T ss_pred             CceeechhhhhcchhhHHHHHHHHHHHhCccceeeEeccCCcccEEEeeEe--cCCCcEEeecccCCCchhHHHHHHHHh
Confidence            4579999999885  89999999999999999876555432  22222222  223445565544333222       13


Q ss_pred             CCCCceEEEEEECCHHHHHHHHHHcCCeeeeCC
Q 022831           89 IGTGFGHLAIATEDVYKMVENIRAKGGNVTREP  121 (291)
Q Consensus        89 ~g~~~~~i~~~v~d~~~~~~~l~~~G~~~~~~~  121 (291)
                      .|.|++||+|.++|+-++.++|+++|++....|
T Consensus       242 ~G~GIQHIA~~T~dI~~tv~~lr~rG~~fl~ip  274 (363)
T COG3185         242 RGEGIQHIAFGTDDIYATVAALRERGVKFLPIP  274 (363)
T ss_pred             CCCcceEEEecccHHHHHHHHHHHcCCccCCCc
Confidence            778999999999999999999999999987654

>KOG0638 consensus 4-hydroxyphenylpyruvate dioxygenase [Amino acid transport and metabolism]

Probab=98.26  E-value=1.8e-06  Score=71.25  Aligned_cols=128  Identities=16%  Similarity=0.184  Sum_probs=86.7

Q ss_pred             CCceeeeeeeCCchhhHHHHHHhcCCeeeeeccCccc--ceeeeeeccCCCCcceEEEEeEecCce--e-----eccCce
Q 022831          152 EPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPEL--KCALAMLGYAEEDQTTVLELAYSYGVT--E-----YTKGNA  222 (291)
Q Consensus       152 ~~~~hv~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~l~~~~~~~--~-----~~~~~g  222 (291)
                      .+++||.+.|.|...+++||...|||++....+..-+  ......++.+    ...+.+....+..  .     ...|.|
T Consensus        16 l~f~Hi~F~vgna~q~A~~y~~~fGfep~A~~~letg~~~~~s~alr~g----~~vFv~~s~~~p~~~~~G~~l~~Hgdg   91 (381)
T KOG0638|consen   16 LRFHHIEFWVGNAKQAARWYCSGFGFEPLAYRGLETGSREWASHALRQG----KIVFVFNSAYNPDNSEYGDHLVKHGDG   91 (381)
T ss_pred             eeeeEEEEEecCcHHHHHHHHhhcCCcchhcccccccchHHHHHHhhcC----CEEEEEecCCCCCchhhhhhhhhcccc
Confidence            4699999999999999999999999998765432211  1111222211    1222222211111  0     123567


Q ss_pred             eeEEEEEecChHHHHHHHHHHHHhhCCeeeecccccCC--CCceEEEEECCCCCeEEEEechhhhhh
Q 022831          223 YAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPG--LNTKITSFVDPDGWKTVLVDNEDFLKE  287 (291)
Q Consensus       223 ~~hia~~v~di~~~~~~l~~~~~~~G~~~~~~p~~~~~--~~~~~~~~~DPdG~~iel~~~~~~~~~  287 (291)
                      +--+||+|+|.+++.+.+    .++|+++..+|.....  +..+++.+..+......++++..++++
T Consensus        92 vkdvafeVeD~da~~~~~----va~Ga~v~~~p~~~~da~G~v~~A~l~tygd~thtlvEr~~y~g~  154 (381)
T KOG0638|consen   92 VKDVAFEVEDADAIFQEA----VANGAKVVRPPWEESDAQGAVTYAVLKTYGDTTHTLVERKGYKGP  154 (381)
T ss_pred             hhceEEEecchHHHHHHH----HHcCCcccCCcceeeccCCcEEEEEEecccchhhhhhhhcccccc
Confidence            888999999999999999    9999999998865332  235778888888877778777766554

>PF14506 CppA_N: CppA N-terminal; PDB: 3E0R_D

Probab=98.18  E-value=6e-05  Score=53.54  Aligned_cols=114  Identities=26%  Similarity=0.335  Sum_probs=60.5

Q ss_pred             eeeeeeeCCchhhHHHHHHhcCCeeeeeccCcccceeeeeeccCCCCcceEEEEeEecCce--eeccCceeeEEEEEecC
Q 022831          155 CQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVT--EYTKGNAYAQVAISTDD  232 (291)
Q Consensus       155 ~hv~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~--~~~~~~g~~hia~~v~d  232 (291)
                      .+-+|+|+|-+...+||++.|||++...-.      .+.+++....  ...+.|-++++..  ...+.--+.++.+.|++
T Consensus         2 ~~PvlRVnnR~~ni~FY~~~LGfkll~EEn------a~a~lg~~~~--~erlvlEESP~~rtr~V~G~KKl~~ivIkv~~   73 (125)
T PF14506_consen    2 IIPVLRVNNRDLNIDFYQKTLGFKLLSEEN------ALAILGDQQK--EERLVLEESPSMRTRAVEGPKKLNRIVIKVPN   73 (125)
T ss_dssp             EEEEEEESSHHHHHHHHTTTT--EEEEEET------TEEEEE-TT----EEEEEEE--TTT-B--SSS-SEEEEEEEESS
T ss_pred             cCceEEEcCHHHhHHHHHhccCcEEeeccc------cEEEecCCCC--ceEEEEecCCccccccccCcceeeEEEEEcCC
Confidence            456799999999999999999999876521      3455553332  3334443443332  12223378999999998


Q ss_pred             hHHHHHHHHHHHHhhCCeeeecccccCCCCceEEEEECCCCCeEEEEechhh
Q 022831          233 VYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNEDF  284 (291)
Q Consensus       233 i~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~~~  284 (291)
                      ..++- .|    .+.|.++.. ..  -+.+++.+-..+|.|.+|.|....+.
T Consensus        74 ~~EIe-~L----Lar~~~~~~-l~--kg~~gyAfe~vSPEgd~~llhaEdd~  117 (125)
T PF14506_consen   74 PKEIE-AL----LARGAQYDR-LY--KGKNGYAFEAVSPEGDRFLLHAEDDI  117 (125)
T ss_dssp             HHHHH-HH----HHC-S--SE-EE--E-SSSEEEEEE-TT--EEEEE--S-G
T ss_pred             HHHHH-HH----Hhcccccce-eE--EcCCceEEEEECCCCCEEEEEEcCCH
Confidence            44443 34    355554322 11  12234555578999999999886554

>PF14696 Glyoxalase_5: Hydroxyphenylpyruvate dioxygenase, HPPD, N-terminal ; PDB: 1CJX_A 2R5V_A

Probab=97.98  E-value=0.0002  Score=53.38  Aligned_cols=118  Identities=19%  Similarity=0.160  Sum_probs=76.3

Q ss_pred             CceeeeeeeCCchhhHHHHHHhcCCeeeeeccCcccceeeeeeccCCCCcceEEEEeEecCcee----eccCceeeEEEE
Q 022831          153 PLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTE----YTKGNAYAQVAI  228 (291)
Q Consensus       153 ~~~hv~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~----~~~~~g~~hia~  228 (291)
                      .+.+|.+.++|.++...++ +.|||+..-+....+  ..++-.+      ...+.+...+....    ...|+|+--++|
T Consensus         9 G~dFvEFa~~~~~~l~~~~-~~lGF~~~a~hrsk~--v~l~rQG------~I~~vln~ep~s~a~~~~~~HG~sv~aiaf   79 (139)
T PF14696_consen    9 GFDFVEFAVPDAQALAQLF-TALGFQPVARHRSKD--VTLYRQG------DINFVLNSEPDSFAAEFAAQHGPSVCAIAF   79 (139)
T ss_dssp             EEEEEEEE-SSTTSCHHHH-CCCCEEEECCECCCS--EEEEEET------TEEEEEEEESTSCHHHHHHHHSSEEEEEEE
T ss_pred             CeEEEEEecCCHHHHHHHH-HHhCcceEEecCCcc--eEEEEeC------CEEEEEeCCCcchHHHHHHhcCCEEEEEEE
Confidence            4789999999987777777 569999877653322  3333222      24444433322210    124789999999


Q ss_pred             EecChHHHHHHHHHHHHhhCCeeeecccccCCCCceEEEEECCCCCeEEEEechhhh
Q 022831          229 STDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNEDFL  285 (291)
Q Consensus       229 ~v~di~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~~~~  285 (291)
                      .|+|..+++++.    .+.|.+....|....  ...+.-++-++|.++-|+++.+..
T Consensus        80 rV~Da~~A~~rA----~~~GA~~~~~~~~~~--e~~~paI~g~G~sl~yfVdr~~~~  130 (139)
T PF14696_consen   80 RVDDAAAAYERA----VALGAEPVQEPTGPG--ELNIPAIRGIGGSLHYFVDRYGDK  130 (139)
T ss_dssp             EES-HHHHHHHH----HHTT--EEEEEEETT---BEEEEEE-CCC-EEEEEE--SSS
T ss_pred             EeCCHHHHHHHH----HHcCCcCcccCCCCC--cEeeeeEEccCCCEEEEEecCCCC
Confidence            999999999999    999999888764222  246677999999999999986654

>PF13468 Glyoxalase_3: Glyoxalase-like domain; PDB: 3P8A_B

Probab=97.76  E-value=0.00011  Score=57.81  Aligned_cols=87  Identities=24%  Similarity=0.281  Sum_probs=50.3

Q ss_pred             ceeeeeeeCCchhhHHHHHHhcCCeeeeeccCcccc--eeeeeeccCCCCcceEEEEeEecCceee------------cc
Q 022831          154 LCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELK--CALAMLGYAEEDQTTVLELAYSYGVTEY------------TK  219 (291)
Q Consensus       154 ~~hv~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~l~~~~~~~~~------------~~  219 (291)
                      |+|+.+.|+|++++.++|.+.+||.+......+..+  -.+++++      ...|||....+....            ..
T Consensus         1 lDH~v~~v~dl~~a~~~~~~~lGf~~~~gg~h~~~GT~N~li~f~------~~YlEli~i~~~~~~~~~~~~~~~~~~~~   74 (175)
T PF13468_consen    1 LDHLVIAVRDLDAAVERFEQRLGFTVTPGGEHPGWGTANALIPFG------DGYLELIAIDPEAPAPDRGRWFGLDRLAG   74 (175)
T ss_dssp             EEEEEEE-TTGGG----GGGS--S--EEEEE-TTT-EEEEEEE-S------SSEEEEEEES-HHHSTGGGT-TTTHHHHT
T ss_pred             CCEEEEEcCCHHHHHHhhhhcceEeecCCCcCCCCccEEEEEeeC------CceEEEEEeCCcccccccccceechhhcC
Confidence            689999999999999999889999988765544322  1233343      237787663222111            13


Q ss_pred             CceeeEEEEEecChHHHHHHHHHHHHhhCCe
Q 022831          220 GNAYAQVAISTDDVYKSAEVVNLVTQELGGK  250 (291)
Q Consensus       220 ~~g~~hia~~v~di~~~~~~l~~~~~~~G~~  250 (291)
                      +.|+.+++|.++|+++..+++    ++.|+.
T Consensus        75 ~~g~~~~~l~t~d~~~~~~~l----~~~G~~  101 (175)
T PF13468_consen   75 GEGLYGWALRTDDIEAVAARL----RAAGLD  101 (175)
T ss_dssp             --EEEEEEEE-S-HHHHHHHH----HTTT-E
T ss_pred             CCCeEEEEEecCCHHHHHHHH----HhcCCC
Confidence            579999999999999999999    899975

>PF15067 FAM124: FAM124 family

Probab=96.77  E-value=0.016  Score=46.49  Aligned_cols=105  Identities=15%  Similarity=0.172  Sum_probs=64.2

Q ss_pred             cceeeEEEEeC--CHHHHHHHHHHhcCCEEEEEeccCCCceeeEEeecc-CCCcceEEEeeec-CCCCcccCCCCceEEE
Q 022831           22 RRLLHAVYRVG--DLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFG-PEQSYFVVELTYN-YGVTSYDIGTGFGHLA   97 (291)
Q Consensus        22 ~~i~hv~l~v~--d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~l~~~-~~~~~~~~g~~~~~i~   97 (291)
                      ..|-.++|.|+  |.+.+.+||+-+|+-+...+..+      ..++.+- ..+..+++.+.+- .+..+  ......-+.
T Consensus       127 ~EilRftly~~~~N~~d~vr~Yelil~~~~~~~k~~------FC~F~lys~~~~~iQlsLK~lp~~~~p--~p~esavLq  198 (236)
T PF15067_consen  127 KEILRFTLYCSFDNYEDMVRFYELILQREPTQQKED------FCFFTLYSQPGLDIQLSLKQLPPGMSP--EPTESAVLQ  198 (236)
T ss_pred             ccEEEEEEEecCCCHHHHHHHHHHHhccCcceeeCC------cEEEEEecCCCeEEEEEeccCCCCCCc--ccccceEEE
Confidence            46778899999  99999999999999988654332      3344332 2233344444332 12211  112334578


Q ss_pred             EEECCHHHHHHHHHHcCCeeeeCCccCCCCceEEEEEECCCCcEEEE
Q 022831           98 IATEDVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFEL  144 (291)
Q Consensus        98 ~~v~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dP~G~~iel  144 (291)
                      |.|.|+.+++..|-.-..++         +..+ .-..|||||.|-|
T Consensus       199 F~V~~igqLvpLLPnpc~PI---------S~~r-WqT~D~DGNkILL  235 (236)
T PF15067_consen  199 FRVEDIGQLVPLLPNPCSPI---------SETR-WQTEDYDGNKILL  235 (236)
T ss_pred             EEecchhhhcccCCCCcccc---------cCCc-ceeeCCCCCEecc
Confidence            99999988765543332222         2222 3479999999854

>PF14507 CppA_C: CppA C-terminal; PDB: 3E0R_D

Probab=96.57  E-value=0.0037  Score=43.49  Aligned_cols=92  Identities=18%  Similarity=0.207  Sum_probs=42.3

Q ss_pred             ceeeeeeeCCchhhHHHHHHhcCCeeeeeccCcccceeeeeeccCCCCcceEEEEeEecCceeeccCceeeEEEEEec--
Q 022831          154 LCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAISTD--  231 (291)
Q Consensus       154 ~~hv~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~~hia~~v~--  231 (291)
                      +..+.|+|+| ++++.||.++||-...         ..+.+....+++    |.+       +....=++-.+-|.|+  
T Consensus         6 ~e~i~LNV~d-~~~~~fy~~~f~~~~~---------~~l~f~ea~G~D----L~~-------~~~~twDLe~Lkf~V~~~   64 (101)
T PF14507_consen    6 FESIELNVPD-AKSQSFYQSIFGGQLP---------FFLTFQEAQGPD----LTI-------ENNETWDLEMLKFQVPKD   64 (101)
T ss_dssp             E-EEEEEE-T--T---S--H---HHHT---------TTEEEEE---CC----GSS--------TTSBSSEEEEEEEES-S
T ss_pred             EEEEEEeCCC-hhHHHHHHhccccCCC---------ceEEEeeccCCc----ccc-------CCCcEEeeEEEEEEecCc
Confidence            5678899999 8899999998873211         122222211110    000       0001126778999998  


Q ss_pred             -ChHHHHHHHHHHHHhhCCeeeecccccCCCCceEEEEECCCCCeEEE
Q 022831          232 -DVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVL  278 (291)
Q Consensus       232 -di~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iel  278 (291)
                       |+.++.+++    ++.+  +.-+.      ..++..+.||++..|++
T Consensus        65 ~Dl~~L~~~l----e~~~--~fidK------k~k~l~~~Dps~IElWF  100 (101)
T PF14507_consen   65 FDLAALKSHL----EEQE--FFIDK------KEKFLVTSDPSQIELWF  100 (101)
T ss_dssp             --HHHHHHHT----TTS---EE--T------T-SEEEEE-TTS-EEEE
T ss_pred             ccHHHHHHHh----cccc--eEecC------CceEEEEECCcceEEEe
Confidence             577777777    5533  33332      36789999999998876

>PF06983 3-dmu-9_3-mt: 3-demethylubiquinone-9 3-methyltransferase; PDB: 1U7I_A 1TSJ_A 1U69_D 3L20_B 3OMS_A

Probab=96.49  E-value=0.16  Score=36.84  Aligned_cols=96  Identities=20%  Similarity=0.378  Sum_probs=52.4

Q ss_pred             CCHHHHHHHHHHhcCCEE-EEEeccCC------CceeeEEeeccCCCcceEEEeeecCCCCcccCCCCceEEEEEECCHH
Q 022831           32 GDLDRTIKYYTECFGMEL-LRKRDVPE------EKYSNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHLAIATEDVY  104 (291)
Q Consensus        32 ~d~~~~~~FY~~~lG~~~-~~~~~~~~------~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~g~~~~~i~~~v~d~~  104 (291)
                      .+.+++.+||+++||-.. ......++      +...++.+.++  +..  +......  +.+..++ ...+++.++|.+
T Consensus        11 g~a~eA~~fY~~vf~~~~i~~~~~~~~~~~~~~~~v~ha~l~i~--g~~--lm~~D~~--~~~~~~~-~~sl~i~~~~~e   83 (116)
T PF06983_consen   11 GNAEEALEFYKEVFGGSEIMTFGDYPDDEPEWKDKVMHAELTIG--GQK--LMASDGG--PDFPFGN-NISLCIECDDEE   83 (116)
T ss_dssp             S-HHHHHHHHHHHSTTEEEEEEEE-TTTCTTHTTSEEEEEEEET--TEE--EEEEEES--TS----T-TEEEEEEESSHH
T ss_pred             CCHHHHHHHHHHHcCCCEEEEEeECCCCCCCCCCcEEEEEEEEC--CeE--EEEECCC--CCCCCCC-cEEEEEEcCCHH
Confidence            689999999999999533 33222221      23334445443  222  2222211  2233333 367888888854


Q ss_pred             ---HHHHHHHHcCCeeeeCCccCCCCceEEEEEECCCCcEEEEE
Q 022831          105 ---KMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFELI  145 (291)
Q Consensus       105 ---~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dP~G~~iel~  145 (291)
                         .+.++|.+-|-         ++ . .+..+.|--|..|.|+
T Consensus        84 e~~~~f~~Ls~gG~---------~~-~-~~G~v~DkFGv~Wqiv  116 (116)
T PF06983_consen   84 EIDRIFDKLSEGGQ---------WF-S-RYGWVTDKFGVSWQIV  116 (116)
T ss_dssp             HHHHHHHHHHTTTE---------TC-C-EEEEEE-TTS-EEEEE
T ss_pred             HHHHHHHHHHcCCC---------cc-c-eeEEEEeCCCCEEEeC
Confidence               55677777763         22 3 4578999999999875

>PF06983 3-dmu-9_3-mt: 3-demethylubiquinone-9 3-methyltransferase; PDB: 1U7I_A 1TSJ_A 1U69_D 3L20_B 3OMS_A

Probab=96.13  E-value=0.22  Score=36.15  Aligned_cols=99  Identities=21%  Similarity=0.229  Sum_probs=48.5

Q ss_pred             CCchhhHHHHHHhcCCeeeeec-cCcc------cceeeeeeccCCCCcceEEEEeEecCceeeccCceeeEEEEEecChH
Q 022831          162 GDLGRSIKFYEKALGMKLLRTI-DSPE------LKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAISTDDVY  234 (291)
Q Consensus       162 ~D~~~~~~Fy~~~lG~~~~~~~-~~~~------~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~~hia~~v~di~  234 (291)
                      .+.+++.+||.++||-...... ..++      +......+..+    ...|......  .....+++ ..+.+.++|.+
T Consensus        11 g~a~eA~~fY~~vf~~~~i~~~~~~~~~~~~~~~~v~ha~l~i~----g~~lm~~D~~--~~~~~~~~-~sl~i~~~~~e   83 (116)
T PF06983_consen   11 GNAEEALEFYKEVFGGSEIMTFGDYPDDEPEWKDKVMHAELTIG----GQKLMASDGG--PDFPFGNN-ISLCIECDDEE   83 (116)
T ss_dssp             S-HHHHHHHHHHHSTTEEEEEEEE-TTTCTTHTTSEEEEEEEET----TEEEEEEEES--TS----TT-EEEEEEESSHH
T ss_pred             CCHHHHHHHHHHHcCCCEEEEEeECCCCCCCCCCcEEEEEEEEC----CeEEEEECCC--CCCCCCCc-EEEEEEcCCHH
Confidence            6899999999999994322221 1111      11111222211    1222222222  12222334 56778888744


Q ss_pred             HHHHHHHHHHHhhCCeeeecccccCCCCceEEEEECCCCCeEEEE
Q 022831          235 KSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLV  279 (291)
Q Consensus       235 ~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iel~  279 (291)
                      ++.+..++ |.+.|-         +.  .++..++|..|..|.|+
T Consensus        84 e~~~~f~~-Ls~gG~---------~~--~~~G~v~DkFGv~Wqiv  116 (116)
T PF06983_consen   84 EIDRIFDK-LSEGGQ---------WF--SRYGWVTDKFGVSWQIV  116 (116)
T ss_dssp             HHHHHHHH-HHTTTE---------TC--CEEEEEE-TTS-EEEEE
T ss_pred             HHHHHHHH-HHcCCC---------cc--ceeEEEEeCCCCEEEeC
Confidence            44333322 155443         22  48899999999999985

>PF15067 FAM124: FAM124 family

Probab=95.74  E-value=0.098  Score=42.11  Aligned_cols=104  Identities=16%  Similarity=0.181  Sum_probs=62.9

Q ss_pred             CCceeeeeeeC--CchhhHHHHHHhcCCeeeeeccCcccceeeeeeccCCCCcceEEEEeEecCcee-eccCceeeEEEE
Q 022831          152 EPLCQVMLRVG--DLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTE-YTKGNAYAQVAI  228 (291)
Q Consensus       152 ~~~~hv~l~v~--D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~-~~~~~g~~hia~  228 (291)
                      ..+..+++.|+  |.+.+.+||+-+++-+......+    |-..-+- ...  ...|.|.-..-... .+....-.-+.|
T Consensus       127 ~EilRftly~~~~N~~d~vr~Yelil~~~~~~~k~~----FC~F~ly-s~~--~~~iQlsLK~lp~~~~p~p~esavLqF  199 (236)
T PF15067_consen  127 KEILRFTLYCSFDNYEDMVRFYELILQREPTQQKED----FCFFTLY-SQP--GLDIQLSLKQLPPGMSPEPTESAVLQF  199 (236)
T ss_pred             ccEEEEEEEecCCCHHHHHHHHHHHhccCcceeeCC----cEEEEEe-cCC--CeEEEEEeccCCCCCCcccccceEEEE
Confidence            45788899998  99999999999999887554321    2222221 111  34444433211110 111224467889


Q ss_pred             EecChHHHHHHHHHHHHhhCCeeeecccc-cCCCCceEEEEECCCCCeEE
Q 022831          229 STDDVYKSAEVVNLVTQELGGKITRQPGP-IPGLNTKITSFVDPDGWKTV  277 (291)
Q Consensus       229 ~v~di~~~~~~l~~~~~~~G~~~~~~p~~-~~~~~~~~~~~~DPdG~~ie  277 (291)
                      .|.|+-+++.-|              |.. .|.+.+ -+-..|||||.|=
T Consensus       200 ~V~~igqLvpLL--------------Pnpc~PIS~~-rWqT~D~DGNkIL  234 (236)
T PF15067_consen  200 RVEDIGQLVPLL--------------PNPCSPISET-RWQTEDYDGNKIL  234 (236)
T ss_pred             EecchhhhcccC--------------CCCcccccCC-cceeeCCCCCEec
Confidence            999988888777              222 222223 3678999999884

>PF14507 CppA_C: CppA C-terminal; PDB: 3E0R_D

Probab=95.31  E-value=0.048  Score=38.03  Aligned_cols=90  Identities=16%  Similarity=0.243  Sum_probs=39.2

Q ss_pred             ceeeEEEEeCCHHHHHHHHHHhcCCEEEEEeccCCCceeeEEeeccCCCcceEEEeeecCCCCcc---cCCCCceEEEEE
Q 022831           23 RLLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTSY---DIGTGFGHLAIA   99 (291)
Q Consensus        23 ~i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~---~~g~~~~~i~~~   99 (291)
                      .+..+.|.|+| ++++.||+++||-++      +                 +.+.+.+..++.-.   ..-=++..+-|.
T Consensus         5 ~~e~i~LNV~d-~~~~~fy~~~f~~~~------~-----------------~~l~f~ea~G~DL~~~~~~twDLe~Lkf~   60 (101)
T PF14507_consen    5 EFESIELNVPD-AKSQSFYQSIFGGQL------P-----------------FFLTFQEAQGPDLTIENNETWDLEMLKFQ   60 (101)
T ss_dssp             EE-EEEEEE-T--T---S--H---HHH------T-----------------TTEEEEE---CCGSS-TTSBSSEEEEEEE
T ss_pred             EEEEEEEeCCC-hhHHHHHHhccccCC------C-----------------ceEEEeeccCCccccCCCcEEeeEEEEEE
Confidence            46789999999 889999999886211      0                 00111111111100   000145567888


Q ss_pred             EC---CHHHHHHHHHHcCCeeeeCCccCCCCceEEEEEECCCCcEEEE
Q 022831          100 TE---DVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFEL  144 (291)
Q Consensus       100 v~---d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dP~G~~iel  144 (291)
                      |+   |+.++.++|.++++-+.        ....+..+.||.+..+-+
T Consensus        61 V~~~~Dl~~L~~~le~~~~fid--------Kk~k~l~~~Dps~IElWF  100 (101)
T PF14507_consen   61 VPKDFDLAALKSHLEEQEFFID--------KKEKFLVTSDPSQIELWF  100 (101)
T ss_dssp             ES-S--HHHHHHHTTTS-EE----------TT-SEEEEE-TTS-EEEE
T ss_pred             ecCcccHHHHHHHhcccceEec--------CCceEEEEECCcceEEEe
Confidence            98   58888888888543321        223346689999976543

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	291
1f9z_A	135	Crystal Structure Of The Ni(Ii)-Bound Glyoxalase I		5e-37
1f9z_A	135	Crystal Structure Of The Ni(Ii)-Bound Glyoxalase I		2e-27
2c21_A	144	Specificity Of The Trypanothione-Dependednt Leishma		6e-31
2c21_A	144	Specificity Of The Trypanothione-Dependednt Leishma		7e-20
3zi1_A	330	Crystal Structure Of Human Glyoxalase Domain-contai		2e-23
2za0_A	184	Crystal Structure Of Mouse Glyoxalase I Complexed W		3e-12
2za0_A	184	Crystal Structure Of Mouse Glyoxalase I Complexed W		1e-10
1fro_A	183	Human Glyoxalase I With Benzyl-Glutathione Inhibito		4e-12
1fro_A	183	Human Glyoxalase I With Benzyl-Glutathione Inhibito		3e-09
3vw9_A	187	Human Glyoxalase I With An N-Hydroxypyridone Inhibi		5e-12
3vw9_A	187	Human Glyoxalase I With An N-Hydroxypyridone Inhibi		3e-09
1bh5_A	183	Human Glyoxalase I Q33e, E172q Double Mutant Length		1e-11
1bh5_A	183	Human Glyoxalase I Q33e, E172q Double Mutant Length		9e-09

>pdb|1F9Z|A Chain A, Crystal Structure Of The Ni(Ii)-Bound Glyoxalase I From Escherichia Coli Length = 135

Iteration: 1
 Score =  151 bits (381), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 70/124 (56%), Positives = 92/124 (74%)
Query: 23  RLLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNY 82
           RLLH + RVGDL R+I +YT+  GM+LLR  + PE KYS AF+G+GPE    V+ELTYN+
Sbjct: 2   RLLHTMLRVGDLQRSIDFYTKVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNW 61
Query: 83  GVTSYDIGTGFGHLAIATEDVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIF 142
           GV  Y++GT +GH+A++ ++  +  E IR  GGNVTRE GP+KG TT  AFV+DPDGY  
Sbjct: 62  GVDKYELGTAYGHIALSVDNAAEACEKIRQNGGNVTREAGPVKGGTTVIAFVEDPDGYKI 121
Query: 143 ELIQ 146
           ELI+
Sbjct: 122 ELIE 125

>pdb|1F9Z|A Chain A, Crystal Structure Of The Ni(Ii)-Bound Glyoxalase I From Escherichia Coli Length = 135

Iteration: 1
 Score =  119 bits (298), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 60/130 (46%), Positives = 84/130 (64%), Gaps = 4/130 (3%)
Query: 154 LCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYG 213
           L   MLRVGDL RSI FY K LGMKLLRT ++PE K +LA +GY  E +  V+EL Y++G
Sbjct: 3   LLHTMLRVGDLQRSIDFYTKVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNWG 62
Query: 214 VTEYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDG 273
           V +Y  G AY  +A+S D+  ++ E +    ++ GG +TR+ GP+ G  T I    DPDG
Sbjct: 63  VDKYELGTAYGHIALSVDNAAEACEKI----RQNGGNVTREAGPVKGGTTVIAFVEDPDG 118
Query: 274 WKTVLVDNED 283
           +K  L++ +D
Sbjct: 119 YKIELIEEKD 128

>pdb|2C21|A Chain A, Specificity Of The Trypanothione-Dependednt Leishmania Major Glyoxalase I: Structure And Biochemical Comparison With The Human Enzyme Length = 144

Iteration: 1
 Score =  130 bits (328), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 66/125 (52%), Positives = 85/125 (68%), Gaps = 5/125 (4%)
Query: 22  RRLLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYN 81
           RR+LH + RVGDLDR+IK+YTE  GM++LRK DVPE+KY+  FLG+GPE S  V+ELTYN
Sbjct: 7   RRMLHTMIRVGDLDRSIKFYTERLGMKVLRKWDVPEDKYTLVFLGYGPEMSSTVLELTYN 66
Query: 82  YGVTSYDIGTGFGHLAIATEDVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYI 141
           YGVTSY     +GH+AI  EDV ++V ++R     +  E       +   AFV DPDGY 
Sbjct: 67  YGVTSYKHDEAYGHIAIGVEDVKELVADMRKHDVPIDYEDE-----SGFMAFVVDPDGYY 121
Query: 142 FELIQ 146
            EL+ 
Sbjct: 122 IELLN 126

>pdb|2C21|A Chain A, Specificity Of The Trypanothione-Dependednt Leishmania Major Glyoxalase I: Structure And Biochemical Comparison With The Human Enzyme Length = 144

Iteration: 1
 Score = 94.4 bits (233), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 54/140 (38%), Positives = 77/140 (55%), Gaps = 13/140 (9%)
Query: 154 LCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYG 213
           +   M+RVGDL RSIKFY + LGMK+LR  D PE K  L  LGY  E  +TVLEL Y+YG
Sbjct: 9   MLHTMIRVGDLDRSIKFYTERLGMKVLRKWDVPEDKYTLVFLGYGPEMSSTVLELTYNYG 68
Query: 214 VTEYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTK--ITSFVDP 271
           VT Y    AY  +AI  +DV           +EL   + +   PI   +    +   VDP
Sbjct: 69  VTSYKHDEAYGHIAIGVEDV-----------KELVADMRKHDVPIDYEDESGFMAFVVDP 117
Query: 272 DGWKTVLVDNEDFLKELQSE 291
           DG+   L++ +  +++ +++
Sbjct: 118 DGYYIELLNEKTMMEKAEAD 137

>pdb|3ZI1|A Chain A, Crystal Structure Of Human Glyoxalase Domain-containing Protein 4 (glod4) Length = 330

Iteration: 1
 Score =  106 bits (264), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 86/286 (30%), Positives = 131/286 (45%), Gaps = 51/286 (17%)
Query: 22  RRLLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEE-----------KYSNAFLGFGPE 70
           RR LH V++VG+  +T ++Y +  GM++LR  +  E            K+S   +GFGPE
Sbjct: 26  RRALHFVFKVGNRFQTARFYRDVLGMKVLRHEEFEEGCKAACNGPYDGKWSKTMVGFGPE 85
Query: 71  QSYFVVELTYNYGVTSYDIGTGFGHLAIATEDVYKMVENIRAKGGNVTREPGPLKGMTTH 130
             +FV ELTYNYGV  Y +G  F  + +A+    + V N R       +   PL  +   
Sbjct: 86  DDHFVAELTYNYGVGDYKLGNDFMGITLASS---QAVSNAR-------KLEWPLTEVAEG 135
Query: 131 FAFVKDPDGYIFELIQRG-PTPEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELK 189
               + P GY F L  R  P  +P+ +V L V DL +S+ ++   LGMK+    +  +  
Sbjct: 136 VFETEAPGGYKFYLQNRSLPQSDPVLKVTLAVSDLQKSLNYWCNLLGMKIYENDEEKQ-- 193
Query: 190 CALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAIST--------DDVYKSAE--- 238
              A+LGYA  D    LEL    G  ++    A+ ++A S         +D+ K      
Sbjct: 194 --RALLGYA--DNQCKLELQGVKGGVDHAA--AFGRIAFSCPQKELPDLEDLMKRENQKI 247
Query: 239 VVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNEDF 284
           +  LV+ +  GK T Q          +    DPDG +   V +E F
Sbjct: 248 LTPLVSLDTPGKATVQ----------VVILADPDGHEICFVGDEAF 283

>pdb|2ZA0|A Chain A, Crystal Structure Of Mouse Glyoxalase I Complexed With Methyl-Gerfelin Length = 184

Iteration: 1
 Score = 68.9 bits (167), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 46/149 (30%), Positives = 72/149 (48%), Gaps = 30/149 (20%)
Query: 24  LLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGF---------GPEQSYF 74
           L   + R+ D  +++ +YT   G+ LL+K D P  K+S  FL +           E++ +
Sbjct: 32  LQQTMLRIKDPKKSLDFYTRVLGLTLLQKLDFPAMKFSLYFLAYEDKNDIPKDKSEKTAW 91
Query: 75  ------VVELTYNYG-----VTSYDIGT----GFGHLAIATEDVYKMVENIRAKGGNVTR 119
                  +ELT+N+G       SY  G     GFGH+ IA  DVY   +     G    +
Sbjct: 92  TFSRKATLELTHNWGTEDDETQSYHNGNSDPRGFGHIGIAVPDVYSACKRFEELGVKFVK 151
Query: 120 EP--GPLKGMTTHFAFVKDPDGYIFELIQ 146
           +P  G +KG+    AF++DPDGY  E++ 
Sbjct: 152 KPDDGKMKGL----AFIQDPDGYWIEILN 176

>pdb|2ZA0|A Chain A, Crystal Structure Of Mouse Glyoxalase I Complexed With Methyl-Gerfelin Length = 184

Iteration: 1
 Score = 63.5 bits (153), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 56/194 (28%), Positives = 91/194 (46%), Gaps = 48/194 (24%)
Query: 120 EPGPLK-GMT--THFAFVKDPDGYIFELIQRGPTPEPLCQVMLRVGDLGRSIKFYEKALG 176
           EP P   G+T  T F+   DPD    + +        L Q MLR+ D  +S+ FY + LG
Sbjct: 3   EPQPASSGLTDETAFSCCSDPDPSTKDFL--------LQQTMLRIKDPKKSLDFYTRVLG 54
Query: 177 MKLLRTIDSPELKCALAMLGYAEED---------------QTTVLELAYSYGVTE----- 216
           + LL+ +D P +K +L  L Y +++               +   LEL +++G  +     
Sbjct: 55  LTLLQKLDFPAMKFSLYFLAYEDKNDIPKDKSEKTAWTFSRKATLELTHNWGTEDDETQS 114
Query: 217 YTKGNA----YAQVAISTDDVYKSAEVVNLVTQELGGKITRQP--GPIPGLNTKITSFV- 269
           Y  GN+    +  + I+  DVY + +      +ELG K  ++P  G + GL     +F+ 
Sbjct: 115 YHNGNSDPRGFGHIGIAVPDVYSACKRF----EELGVKFVKKPDDGKMKGL-----AFIQ 165
Query: 270 DPDG-WKTVLVDNE 282
           DPDG W  +L  N+
Sbjct: 166 DPDGYWIEILNPNK 179

>pdb|1FRO|A Chain A, Human Glyoxalase I With Benzyl-Glutathione Inhibitor Length = 183

Iteration: 1
 Score = 68.6 bits (166), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 46/149 (30%), Positives = 69/149 (46%), Gaps = 30/149 (20%)
Query: 24  LLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSY---------- 73
           L   + RV D  +++ +YT   GM L++K D P  K+S  FL +  +             
Sbjct: 31  LQQTMLRVKDPKKSLDFYTRVLGMTLIQKCDFPIMKFSLYFLAYEDKNDIPKEKDEKIAW 90
Query: 74  -----FVVELTYNYG-----VTSYDIGT----GFGHLAIATEDVYKMVENIRAKGGNVTR 119
                  +ELT+N+G       SY  G     GFGH+ IA  DVY   +     G    +
Sbjct: 91  ALSRKATLELTHNWGTEDDETQSYHNGNSDPRGFGHIGIAVPDVYSACKRFEELGVKFVK 150
Query: 120 EP--GPLKGMTTHFAFVKDPDGYIFELIQ 146
           +P  G +KG+    AF++DPDGY  E++ 
Sbjct: 151 KPDDGKMKGL----AFIQDPDGYWIEILN 175

>pdb|1FRO|A Chain A, Human Glyoxalase I With Benzyl-Glutathione Inhibitor Length = 183

Iteration: 1
 Score = 58.9 bits (141), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 47/157 (29%), Positives = 76/157 (48%), Gaps = 37/157 (23%)
Query: 154 LCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEED------------ 201
           L Q MLRV D  +S+ FY + LGM L++  D P +K +L  L Y +++            
Sbjct: 31  LQQTMLRVKDPKKSLDFYTRVLGMTLIQKCDFPIMKFSLYFLAYEDKNDIPKEKDEKIAW 90
Query: 202 ---QTTVLELAYSYGVTE-----YTKGNA----YAQVAISTDDVYKSAEVVNLVTQELGG 249
              +   LEL +++G  +     Y  GN+    +  + I+  DVY + +      +ELG 
Sbjct: 91  ALSRKATLELTHNWGTEDDETQSYHNGNSDPRGFGHIGIAVPDVYSACKRF----EELGV 146
Query: 250 KITRQP--GPIPGLNTKITSFV-DPDG-WKTVLVDNE 282
           K  ++P  G + GL     +F+ DPDG W  +L  N+
Sbjct: 147 KFVKKPDDGKMKGL-----AFIQDPDGYWIEILNPNK 178

>pdb|3VW9|A Chain A, Human Glyoxalase I With An N-Hydroxypyridone Inhibitor Length = 187

Iteration: 1
 Score = 68.2 bits (165), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 46/149 (30%), Positives = 69/149 (46%), Gaps = 30/149 (20%)
Query: 24  LLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSY---------- 73
           L   + RV D  +++ +YT   GM L++K D P  K+S  FL +  +             
Sbjct: 35  LQQTMLRVKDPKKSLDFYTRVLGMTLIQKCDFPIMKFSLYFLAYEDKNDIPKEKDEKIAW 94
Query: 74  -----FVVELTYNYG-----VTSYDIGT----GFGHLAIATEDVYKMVENIRAKGGNVTR 119
                  +ELT+N+G       SY  G     GFGH+ IA  DVY   +     G    +
Sbjct: 95  ALSRKATLELTHNWGTEDDETQSYHNGNSDPRGFGHIGIAVPDVYSACKRFEELGVKFVK 154
Query: 120 EP--GPLKGMTTHFAFVKDPDGYIFELIQ 146
           +P  G +KG+    AF++DPDGY  E++ 
Sbjct: 155 KPDDGKMKGL----AFIQDPDGYWIEILN 179

>pdb|3VW9|A Chain A, Human Glyoxalase I With An N-Hydroxypyridone Inhibitor Length = 187

Iteration: 1
 Score = 58.9 bits (141), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 47/157 (29%), Positives = 76/157 (48%), Gaps = 37/157 (23%)
Query: 154 LCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEED------------ 201
           L Q MLRV D  +S+ FY + LGM L++  D P +K +L  L Y +++            
Sbjct: 35  LQQTMLRVKDPKKSLDFYTRVLGMTLIQKCDFPIMKFSLYFLAYEDKNDIPKEKDEKIAW 94
Query: 202 ---QTTVLELAYSYGVTE-----YTKGNA----YAQVAISTDDVYKSAEVVNLVTQELGG 249
              +   LEL +++G  +     Y  GN+    +  + I+  DVY + +      +ELG 
Sbjct: 95  ALSRKATLELTHNWGTEDDETQSYHNGNSDPRGFGHIGIAVPDVYSACKRF----EELGV 150
Query: 250 KITRQP--GPIPGLNTKITSFV-DPDG-WKTVLVDNE 282
           K  ++P  G + GL     +F+ DPDG W  +L  N+
Sbjct: 151 KFVKKPDDGKMKGL-----AFIQDPDGYWIEILNPNK 182

>pdb|1BH5|A Chain A, Human Glyoxalase I Q33e, E172q Double Mutant Length = 183

Iteration: 1
 Score = 67.0 bits (162), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 45/149 (30%), Positives = 69/149 (46%), Gaps = 30/149 (20%)
Query: 24  LLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSY---------- 73
           L   + RV D  +++ +YT   GM L++K D P  K+S  FL +  +             
Sbjct: 31  LQETMLRVKDPKKSLDFYTRVLGMTLIQKCDFPIMKFSLYFLAYEDKNDIPKEKDEKIAW 90
Query: 74  -----FVVELTYNYG-----VTSYDIGT----GFGHLAIATEDVYKMVENIRAKGGNVTR 119
                  +ELT+N+G       SY  G     GFGH+ IA  DVY   +     G    +
Sbjct: 91  ALSRKATLELTHNWGTEDDETQSYHNGNSDPRGFGHIGIAVPDVYSACKRFEELGVKFVK 150
Query: 120 EP--GPLKGMTTHFAFVKDPDGYIFELIQ 146
           +P  G +KG+    AF++DPDGY  +++ 
Sbjct: 151 KPDDGKMKGL----AFIQDPDGYWIQILN 175

>pdb|1BH5|A Chain A, Human Glyoxalase I Q33e, E172q Double Mutant Length = 183

Iteration: 1
 Score = 57.4 bits (137), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 46/157 (29%), Positives = 76/157 (48%), Gaps = 37/157 (23%)
Query: 154 LCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEED------------ 201
           L + MLRV D  +S+ FY + LGM L++  D P +K +L  L Y +++            
Sbjct: 31  LQETMLRVKDPKKSLDFYTRVLGMTLIQKCDFPIMKFSLYFLAYEDKNDIPKEKDEKIAW 90
Query: 202 ---QTTVLELAYSYGVTE-----YTKGNA----YAQVAISTDDVYKSAEVVNLVTQELGG 249
              +   LEL +++G  +     Y  GN+    +  + I+  DVY + +      +ELG 
Sbjct: 91  ALSRKATLELTHNWGTEDDETQSYHNGNSDPRGFGHIGIAVPDVYSACKRF----EELGV 146
Query: 250 KITRQP--GPIPGLNTKITSFV-DPDG-WKTVLVDNE 282
           K  ++P  G + GL     +F+ DPDG W  +L  N+
Sbjct: 147 KFVKKPDDGKMKGL-----AFIQDPDGYWIQILNPNK 178

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	291
2c21_A	144	Trypanothione-dependent glyoxalase I; lyase, gluta	1e-59
2c21_A	144	Trypanothione-dependent glyoxalase I; lyase, gluta	2e-34
1f9z_A	135	Glyoxalase I; beta-alpha-beta-BETA-beta motif, pro	4e-58
1f9z_A	135	Glyoxalase I; beta-alpha-beta-BETA-beta motif, pro	6e-36
2za0_A	184	Glyoxalase I; lyase, lactoylglutathione lyase, met	4e-42
2za0_A	184	Glyoxalase I; lyase, lactoylglutathione lyase, met	3e-28
3oa4_A	161	Glyoxalase, BH1468 protein; structural genomics, p	4e-36
3oa4_A	161	Glyoxalase, BH1468 protein; structural genomics, p	8e-18
3rmu_A	134	Methylmalonyl-COA epimerase, mitochondrial; struct	6e-33
3rmu_A	134	Methylmalonyl-COA epimerase, mitochondrial; struct	8e-17
3l7t_A	134	SMU.1112C, putative uncharacterized protein; metal	2e-31
3l7t_A	134	SMU.1112C, putative uncharacterized protein; metal	9e-15
2p25_A	126	Glyoxalase family protein; structural genomics, MC	7e-31
2p25_A	126	Glyoxalase family protein; structural genomics, MC	1e-14
3oxh_A	282	RV0577 protein; kinase regulation, antibiotic resi	1e-28
3oxh_A	282	RV0577 protein; kinase regulation, antibiotic resi	9e-11
3oxh_A	282	RV0577 protein; kinase regulation, antibiotic resi	1e-06
3r6a_A	144	Uncharacterized protein; PSI biology, structural g	3e-28
3r6a_A	144	Uncharacterized protein; PSI biology, structural g	6e-16
3hdp_A	133	Glyoxalase-I; glutathione,lyase, methylglyoxal,110	1e-27
3hdp_A	133	Glyoxalase-I; glutathione,lyase, methylglyoxal,110	1e-15
4g6x_A	155	Glyoxalase/bleomycin resistance protein/dioxygena;	1e-24
4g6x_A	155	Glyoxalase/bleomycin resistance protein/dioxygena;	4e-12
3e5d_A	127	Putative glyoxalase I; structural genomics, joint	2e-24
3e5d_A	127	Putative glyoxalase I; structural genomics, joint	2e-10
3kol_A	156	Oxidoreductase, glyoxalase/bleomycin resistance pr	5e-24
3kol_A	156	Oxidoreductase, glyoxalase/bleomycin resistance pr	2e-10
2rk9_A	145	Glyoxalase/bleomycin resistance protein/dioxygena;	7e-22
2rk9_A	145	Glyoxalase/bleomycin resistance protein/dioxygena;	6e-09
1ss4_A	153	Glyoxalase family protein; structural genomics, PS	1e-20
1ss4_A	153	Glyoxalase family protein; structural genomics, PS	2e-09
3r4q_A	160	Lactoylglutathione lyase; structural genomics, PSI	2e-18
3r4q_A	160	Lactoylglutathione lyase; structural genomics, PSI	2e-06
2r6u_A	148	Uncharacterized protein; structural genomics, PSI-	5e-18
2r6u_A	148	Uncharacterized protein; structural genomics, PSI-	5e-13
1twu_A	139	Hypothetical protein YYCE; structural genomics, pr	3e-17
1twu_A	139	Hypothetical protein YYCE; structural genomics, pr	1e-14
2qqz_A	126	Glyoxalase family protein, putative; alpha-beta st	1e-16
2qqz_A	126	Glyoxalase family protein, putative; alpha-beta st	5e-06
3uh9_A	145	Metallothiol transferase FOSB 2; structural genomi	3e-16
3uh9_A	145	Metallothiol transferase FOSB 2; structural genomi	4e-04
3huh_A	152	Virulence protein STM3117; structural genomics, ny	2e-15
3huh_A	152	Virulence protein STM3117; structural genomics, ny	4e-06
3ghj_A	141	Putative integron gene cassette protein; integron	3e-15
3ghj_A	141	Putative integron gene cassette protein; integron	2e-05
1r9c_A	139	Glutathione transferase; fosfomycin resistance pro	1e-14
1r9c_A	139	Glutathione transferase; fosfomycin resistance pro	1e-06
1xqa_A	113	Glyoxalase/bleomycin resistance protein; dioxygena	2e-14
1xqa_A	113	Glyoxalase/bleomycin resistance protein; dioxygena	4e-06
3ct8_A	146	Protein BH2160, putative glyoxalase; NP_243026.1,	3e-14
3ct8_A	146	Protein BH2160, putative glyoxalase; NP_243026.1,	4e-05
2rk0_A	136	Glyoxalase/bleomycin resistance protein/dioxygena;	4e-14
2rk0_A	136	Glyoxalase/bleomycin resistance protein/dioxygena;	3e-05
1npb_A	141	Fosfomycin-resistance protein; manganese binding,	6e-14
1npb_A	141	Fosfomycin-resistance protein; manganese binding,	4e-04
1mpy_A	307	Catechol 2,3-dioxygenase; extradiol dioxygenase, n	9e-14
1mpy_A	307	Catechol 2,3-dioxygenase; extradiol dioxygenase, n	2e-06
3bqx_A	150	Glyoxalase-related enzyme; VOC superfamily, PSI-2,	4e-13
3bqx_A	150	Glyoxalase-related enzyme; VOC superfamily, PSI-2,	2e-08
3rri_A	135	Glyoxalase/bleomycin resistance protein/dioxygena;	8e-13
3rri_A	135	Glyoxalase/bleomycin resistance protein/dioxygena;	6e-04
1nki_A	135	Probable fosfomycin resistance protein; potassium	1e-12
1nki_A	135	Probable fosfomycin resistance protein; potassium	3e-04
1f1u_A	323	Homoprotocatechuate 2,3-dioxygenase; extradiol, ma	1e-12
1f1u_A	323	Homoprotocatechuate 2,3-dioxygenase; extradiol, ma	8e-04
2qnt_A	141	AGR_C_3434P, uncharacterized protein ATU1872; glyo	2e-12
2qnt_A	141	AGR_C_3434P, uncharacterized protein ATU1872; glyo	4e-09
3ey7_A	133	Biphenyl-2,3-DIOL 1,2-dioxygenase III-related prot	3e-12
3pkv_A	252	Toxoflavin lyase (TFLA); metalloenzyme, vicinal ox	4e-12
3zw5_A	147	Glyoxalase domain-containing protein 5; lyase; 1.6	4e-12
3zw5_A	147	Glyoxalase domain-containing protein 5; lyase; 1.6	3e-05
3lm4_A	339	Catechol 2,3-dioxygenase; NYSGXRC, PSI-II, protein	4e-12
3lm4_A	339	Catechol 2,3-dioxygenase; NYSGXRC, PSI-II, protein	2e-04
2p7o_A	133	Glyoxalase family protein; fosfomycin resistance p	5e-12
2p7o_A	133	Glyoxalase family protein; fosfomycin resistance p	2e-06
1jc4_A	148	Methylmalonyl-COA epimerase; vicinal oxygen chelat	6e-12
3eck_A	365	Protein (homoprotocatechuate 2,3-dioxygenase); oxi	6e-12
2rbb_A	141	Glyoxalase/bleomycin resistance protein/dioxygena;	7e-12
2rbb_A	141	Glyoxalase/bleomycin resistance protein/dioxygena;	3e-08
3hpy_A	309	Catechol 2,3-dioxygenase; repeated motifs, aromati	1e-11
3hpy_A	309	Catechol 2,3-dioxygenase; repeated motifs, aromati	3e-05
3b59_A	310	Glyoxalase/bleomycin resistance protein/dioxygena;	3e-11
1lgt_A	297	Biphenyl-2,3-DIOL 1,2-dioxygenase; extradiol dioxy	4e-11
3m2o_A	164	Glyoxalase/bleomycin resistance protein; unknown f	9e-11
2pjs_A	119	AGR_C_3564P, uncharacterized protein ATU1953; glyo	1e-10
3itw_A	137	Protein TIOX; bleomycin resistance fold, bisinterc	2e-10
3itw_A	137	Protein TIOX; bleomycin resistance fold, bisinterc	4e-05
1zsw_A	338	Metallo protein, glyoxalase family protein; hypoth	2e-10
1zsw_A	338	Metallo protein, glyoxalase family protein; hypoth	3e-07
3gm5_A	159	Lactoylglutathione lyase and related lyases; sheet	3e-10
1sp8_A	418	4-hydroxyphenylpyruvate dioxygenase; oxidoreductas	6e-10
3g12_A	128	Putative lactoylglutathione lyase; glyoxalase, ble	1e-09
3g12_A	128	Putative lactoylglutathione lyase; glyoxalase, ble	3e-05
2zyq_A	300	Probable biphenyl-2,3-DIOL 1,2-dioxygenase BPHC; e	3e-09
1kw3_B	292	2,3-dihydroxybiphenyl dioxygenase; four TIME repet	3e-09
2a4x_A	138	Mitomycin-binding protein; ALFA/beta protein, mito	6e-09
3isq_A	393	4-hydroxyphenylpyruvate dioxygenase; tyrosine meta	2e-08
2i7r_A	118	Conserved domain protein; structural genomics cons	3e-08
2i7r_A	118	Conserved domain protein; structural genomics cons	2e-06
2ehz_A	302	1,2-dihydroxynaphthalene dioxygenase; extradiol di	5e-08
2wl9_A	305	Catechol 2,3-dioxygenase; aromatic hydrocarbons ca	7e-08
3oaj_A	335	Putative ring-cleaving dioxygenase MHQO; structura	1e-07
3oaj_A	335	Putative ring-cleaving dioxygenase MHQO; structura	8e-07
3fcd_A	134	Lyase, ORF125EGC139; lactoylglutathione lyase, YEC	1e-06
3fcd_A	134	Lyase, ORF125EGC139; lactoylglutathione lyase, YEC	2e-04
1sqd_A	424	4-hydroxyphenylpyruvate dioxygenase; oxidoreductas	1e-06
3bt3_A	148	Glyoxalase-related enzyme, ARAC type; VOC superfam	2e-06
2kjz_A	144	ATC0852; protein of unknown function, dimer, struc	2e-06
3rhe_A	148	NAD-dependent benzaldehyde dehydrogenase; structur	2e-06
1ecs_A	126	Bleomycin resistance protein; arm-exchange, antibi	3e-06
1xy7_A	166	Unknown protein; structural genomics, protein stru	1e-05
3sk2_A	132	EHPR; antibiotic resistance, griseoluteate-binding	6e-05
1t47_A	381	4-hydroxyphenylpyruvate dioxygenase; triketone inh	3e-04
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	5e-04

>2c21_A Trypanothione-dependent glyoxalase I; lyase, glutathionylspermidine, methylglyoxal, detoxification; 2.0A {Leishmania major} SCOP: d.32.1.1 Length = 144

 Score =  186 bits (473), Expect = 1e-59
 Identities = 69/143 (48%), Positives = 88/143 (61%), Gaps = 5/143 (3%)

Query: 21  KRRLLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTY 80
            RR+LH + RVGDLDR+IK+YTE  GM++LRK DVPE+KY+  FLG+GPE S  V+ELTY
Sbjct: 6   SRRMLHTMIRVGDLDRSIKFYTERLGMKVLRKWDVPEDKYTLVFLGYGPEMSSTVLELTY 65

Query: 81  NYGVTSYDIGTGFGHLAIATEDVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGY 140
           NYGVTSY     +GH+AI  EDV ++V ++R     +  E       +   AFV DPDGY
Sbjct: 66  NYGVTSYKHDEAYGHIAIGVEDVKELVADMRKHDVPIDYEDE-----SGFMAFVVDPDGY 120

Query: 141 IFELIQRGPTPEPLCQVMLRVGD 163
             EL+      E     M   G 
Sbjct: 121 YIELLNEKTMMEKAEADMKEQGT 143

>2c21_A Trypanothione-dependent glyoxalase I; lyase, glutathionylspermidine, methylglyoxal, detoxification; 2.0A {Leishmania major} SCOP: d.32.1.1 Length = 144

 Score =  121 bits (305), Expect = 2e-34
 Identities = 51/136 (37%), Positives = 74/136 (54%), Gaps = 9/136 (6%)

Query: 156 QVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVT 215
             M+RVGDL RSIKFY + LGMK+LR  D PE K  L  LGY  E  +TVLEL Y+YGVT
Sbjct: 11  HTMIRVGDLDRSIKFYTERLGMKVLRKWDVPEDKYTLVFLGYGPEMSSTVLELTYNYGVT 70

Query: 216 EYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWK 275
            Y    AY  +AI  +DV +    +    ++    I  +          +   VDPDG+ 
Sbjct: 71  SYKHDEAYGHIAIGVEDVKELVADM----RKHDVPIDYEDES-----GFMAFVVDPDGYY 121

Query: 276 TVLVDNEDFLKELQSE 291
             L++ +  +++ +++
Sbjct: 122 IELLNEKTMMEKAEAD 137

>1f9z_A Glyoxalase I; beta-alpha-beta-BETA-beta motif, protein-NI(II) complex, homodimer, lyase; 1.50A {Escherichia coli} SCOP: d.32.1.1 PDB: 1fa5_A 1fa6_A 1fa7_A 1fa8_A Length = 135

 Score =  181 bits (462), Expect = 4e-58
 Identities = 71/132 (53%), Positives = 93/132 (70%)

Query: 23  RLLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNY 82
           RLLH + RVGDL R+I +YT+  GM+LLR  + PE KYS AF+G+GPE    V+ELTYN+
Sbjct: 2   RLLHTMLRVGDLQRSIDFYTKVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNW 61

Query: 83  GVTSYDIGTGFGHLAIATEDVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIF 142
           GV  Y++GT +GH+A++ ++  +  E IR  GGNVTRE GP+KG TT  AFV+DPDGY  
Sbjct: 62  GVDKYELGTAYGHIALSVDNAAEACEKIRQNGGNVTREAGPVKGGTTVIAFVEDPDGYKI 121

Query: 143 ELIQRGPTPEPL 154
           ELI+       L
Sbjct: 122 ELIEEKDAGRGL 133

>1f9z_A Glyoxalase I; beta-alpha-beta-BETA-beta motif, protein-NI(II) complex, homodimer, lyase; 1.50A {Escherichia coli} SCOP: d.32.1.1 PDB: 1fa5_A 1fa6_A 1fa7_A 1fa8_A Length = 135

 Score =  124 bits (314), Expect = 6e-36
 Identities = 62/134 (46%), Positives = 87/134 (64%), Gaps = 6/134 (4%)

Query: 156 QVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVT 215
             MLRVGDL RSI FY K LGMKLLRT ++PE K +LA +GY  E +  V+EL Y++GV 
Sbjct: 5   HTMLRVGDLQRSIDFYTKVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNWGVD 64

Query: 216 EYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFV-DPDGW 274
           +Y  G AY  +A+S D+  ++ E +    ++ GG +TR+ GP+ G  T I  FV DPDG+
Sbjct: 65  KYELGTAYGHIALSVDNAAEACEKI----RQNGGNVTREAGPVKGGTTVIA-FVEDPDGY 119

Query: 275 KTVLVDNEDFLKEL 288
           K  L++ +D  + L
Sbjct: 120 KIELIEEKDAGRGL 133

>2za0_A Glyoxalase I; lyase, lactoylglutathione lyase, methyl- gerfelin; HET: MGI; 1.70A {Mus musculus} PDB: 1qip_A* 1fro_A* 1qin_A* 1bh5_A* Length = 184

 Score =  142 bits (359), Expect = 4e-42
 Identities = 44/162 (27%), Positives = 67/162 (41%), Gaps = 26/162 (16%)

Query: 17  PKKDKRRLLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSY--- 73
           P      L   + R+ D  +++ +YT   G+ LL+K D P  K+S  FL +  +      
Sbjct: 25  PSTKDFLLQQTMLRIKDPKKSLDFYTRVLGLTLLQKLDFPAMKFSLYFLAYEDKNDIPKD 84

Query: 74  ------------FVVELTYNYGV-----TSYDIG----TGFGHLAIATEDVYKMVENIRA 112
                         +ELT+N+G       SY  G     GFGH+ IA  DVY   +    
Sbjct: 85  KSEKTAWTFSRKATLELTHNWGTEDDETQSYHNGNSDPRGFGHIGIAVPDVYSACKRFEE 144

Query: 113 KGGNVTREPGPLKGMTTHFAFVKDPDGYIFELIQRGPTPEPL 154
            G    ++P    G     AF++DPDGY  E++        +
Sbjct: 145 LGVKFVKKPDD--GKMKGLAFIQDPDGYWIEILNPNKIATII 184

>2za0_A Glyoxalase I; lyase, lactoylglutathione lyase, methyl- gerfelin; HET: MGI; 1.70A {Mus musculus} PDB: 1qip_A* 1fro_A* 1qin_A* 1bh5_A* Length = 184

 Score =  106 bits (265), Expect = 3e-28
 Identities = 49/195 (25%), Positives = 84/195 (43%), Gaps = 43/195 (22%)

Query: 120 EPGPLKGMTTH---FAFVKDPDGYIFELIQRGPTPEPLCQVMLRVGDLGRSIKFYEKALG 176
           EP P     T    F+   DPD    + +        L Q MLR+ D  +S+ FY + LG
Sbjct: 3   EPQPASSGLTDETAFSCCSDPDPSTKDFL--------LQQTMLRIKDPKKSLDFYTRVLG 54

Query: 177 MKLLRTIDSPELKCALAMLGYAEED---------------QTTVLELAYSYGVTE----- 216
           + LL+ +D P +K +L  L Y +++               +   LEL +++G  +     
Sbjct: 55  LTLLQKLDFPAMKFSLYFLAYEDKNDIPKDKSEKTAWTFSRKATLELTHNWGTEDDETQS 114

Query: 217 YTKGNA----YAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFV-DP 271
           Y  GN+    +  + I+  DVY + +      +ELG K  ++P        K  +F+ DP
Sbjct: 115 YHNGNSDPRGFGHIGIAVPDVYSACKRF----EELGVKFVKKPDDGK---MKGLAFIQDP 167

Query: 272 DGWKTVLVDNEDFLK 286
           DG+   +++      
Sbjct: 168 DGYWIEILNPNKIAT 182

>3oa4_A Glyoxalase, BH1468 protein; structural genomics, protein structure initiative, glyoxalas PSI-biology, lyase; 1.94A {Bacillus halodurans} Length = 161

 Score =  126 bits (317), Expect = 4e-36
 Identities = 28/137 (20%), Positives = 56/137 (40%), Gaps = 6/137 (4%)

Query: 23  RLLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNY 82
           +L H    V  +   + +Y     ++LL   D+P +    AFL  G  +   +  L+   
Sbjct: 8   KLDHIGIAVTSIKDVLPFYVGSLKLKLLGMEDLPSQGVKIAFLEIGESKIELLEPLSEES 67

Query: 83  GVTSY--DIGTGFGHLAIATEDVYKMVENIRAKGGNV-TREPGPLKGMTTHFAFV--KDP 137
            +  +    G G  H+AI  + + + ++ ++  G  +   EP P        AF+  +  
Sbjct: 68  PIAKFIQKRGEGIHHIAIGVKSIEERIQEVKENGVQMINDEPVPGARGAQ-VAFLHPRSA 126

Query: 138 DGYIFELIQRGPTPEPL 154
            G ++E  ++    E L
Sbjct: 127 RGVLYEFCEKKEQAENL 143

>3oa4_A Glyoxalase, BH1468 protein; structural genomics, protein structure initiative, glyoxalas PSI-biology, lyase; 1.94A {Bacillus halodurans} Length = 161

 Score = 77.9 bits (192), Expect = 8e-18
 Identities = 24/118 (20%), Positives = 47/118 (39%), Gaps = 7/118 (5%)

Query: 156 QVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVT 215
            + + V  +   + FY  +L +KLL   D P     +A L   E     +  L+    + 
Sbjct: 11  HIGIAVTSIKDVLPFYVGSLKLKLLGMEDLPSQGVKIAFLEIGESKIELLEPLSEESPIA 70

Query: 216 EYTK--GNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDP 271
           ++ +  G     +AI    + +  + V    +E G ++     P+PG      +F+ P
Sbjct: 71  KFIQKRGEGIHHIAIGVKSIEERIQEV----KENGVQMI-NDEPVPGARGAQVAFLHP 123

>3rmu_A Methylmalonyl-COA epimerase, mitochondrial; structural genomics consortium, SGC, vitamin B12, mitochondr isomerase; HET: PG4; 1.80A {Homo sapiens} Length = 134

 Score =  116 bits (293), Expect = 6e-33
 Identities = 27/130 (20%), Positives = 50/130 (38%), Gaps = 5/130 (3%)

Query: 22  RRLLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYN 81
            RL H    V DL++   +Y    G ++     +PE   S  F+  G  +   +  L  +
Sbjct: 4   GRLNHVAIAVPDLEKAAAFYKNILGAQVSEAVPLPEHGVSVVFVNLGNTKMELLHPLGLD 63

Query: 82  YGVTSY---DIGTGFGHLAIATEDVYKMVENIRAKGGNVTREPGPLKGMTTHFAFV--KD 136
             +  +   +   G  H+ I  +++   V +++ K      E   +        F+  KD
Sbjct: 64  SPIAGFLQKNKAGGMHHICIEVDNINAAVMDLKKKKIRSLSEEVKIGAHGKPVIFLHPKD 123

Query: 137 PDGYIFELIQ 146
             G + EL Q
Sbjct: 124 CGGVLVELEQ 133

>3rmu_A Methylmalonyl-COA epimerase, mitochondrial; structural genomics consortium, SGC, vitamin B12, mitochondr isomerase; HET: PG4; 1.80A {Homo sapiens} Length = 134

 Score = 74.4 bits (183), Expect = 8e-17
 Identities = 19/124 (15%), Positives = 43/124 (34%), Gaps = 11/124 (8%)

Query: 156 QVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVT 215
            V + V DL ++  FY+  LG ++   +  PE   ++  +         +  L     + 
Sbjct: 8   HVAIAVPDLEKAAAFYKNILGAQVSEAVPLPEHGVSVVFVNLGNTKMELLHPLGLDSPIA 67

Query: 216 EY---TKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFV--- 269
            +    K      + I  D++  +   +    ++   +   +     G + K   F+   
Sbjct: 68  GFLQKNKAGGMHHICIEVDNINAAVMDL----KKKKIRSLSEE-VKIGAHGKPVIFLHPK 122

Query: 270 DPDG 273
           D  G
Sbjct: 123 DCGG 126

>3l7t_A SMU.1112C, putative uncharacterized protein; metal binding protein; 1.80A {Streptococcus mutans} Length = 134

 Score =  112 bits (283), Expect = 2e-31
 Identities = 31/133 (23%), Positives = 48/133 (36%), Gaps = 10/133 (7%)

Query: 22  RRLLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQ----SYFVVE 77
           + + H    V D D++ ++Y    G E++R+   P+       L  G  +       + +
Sbjct: 4   KAVHHVALIVSDYDKSYEFYVNQLGFEVIRENHRPKRHDYKLDLKCGDIELEIFGNKLTD 63

Query: 78  LTYNYGVTSYDI---GTGFGHLAIATEDVYKMVENIRAKGGNVTREPGPLKGMT-THFAF 133
             Y              G  HLA   EDV    + + A G  +  E       T    AF
Sbjct: 64  SNYCAPPERISWPREACGLRHLAFYVEDVEASRQELIALG--IRVEEVRYDDYTGKKMAF 121

Query: 134 VKDPDGYIFELIQ 146
             DPDG   EL +
Sbjct: 122 FFDPDGLPLELHE 134

>3l7t_A SMU.1112C, putative uncharacterized protein; metal binding protein; 1.80A {Streptococcus mutans} Length = 134

 Score = 68.6 bits (168), Expect = 9e-15
 Identities = 26/124 (20%), Positives = 42/124 (33%), Gaps = 12/124 (9%)

Query: 157 VMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGY----AEEDQTTVLELAYSY 212
           V L V D  +S +FY   LG +++R    P+       L       E     + +  Y  
Sbjct: 9   VALIVSDYDKSYEFYVNQLGFEVIRENHRPKRHDYKLDLKCGDIELEIFGNKLTDSNYCA 68

Query: 213 GVTEYTKGNAYAQ---VAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFV 269
                +          +A   +DV  S + +      LG ++            K+  F 
Sbjct: 69  PPERISWPREACGLRHLAFYVEDVEASRQEL----IALGIRVEE-VRYDDYTGKKMAFFF 123

Query: 270 DPDG 273
           DPDG
Sbjct: 124 DPDG 127

>2p25_A Glyoxalase family protein; structural genomics, MCSG, PSI-2, protein struct initiative, midwest center for structural genomics, oxidore; 1.70A {Enterococcus faecalis} Length = 126

 Score =  111 bits (279), Expect = 7e-31
 Identities = 31/126 (24%), Positives = 48/126 (38%), Gaps = 4/126 (3%)

Query: 22  RRLLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYN 81
           + + H      +   T  +Y E  G E+LR+   PE+      L  G  Q   +      
Sbjct: 4   KEIHHVAINASNYQATKNFYVEKLGFEVLRENHRPEKNDIKLDLKLG-SQELEIFISDQF 62

Query: 82  YGVTSYDIGTGFGHLAIATEDVYKMVENIRAKGGNVTREPGPLKGMT-THFAFVKDPDGY 140
               SY    G  HLA   E + +++  +  +G  +  EP  +   T     F  DPDG 
Sbjct: 63  PARPSYPEALGLRHLAFKVEHIEEVIAFLNEQG--IETEPLRVDDFTGKKMTFFFDPDGL 120

Query: 141 IFELIQ 146
             EL +
Sbjct: 121 PLELHE 126

>2p25_A Glyoxalase family protein; structural genomics, MCSG, PSI-2, protein struct initiative, midwest center for structural genomics, oxidore; 1.70A {Enterococcus faecalis} Length = 126

 Score = 68.2 bits (167), Expect = 1e-14
 Identities = 22/118 (18%), Positives = 39/118 (33%), Gaps = 8/118 (6%)

Query: 157 VMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTE 216
           V +   +   +  FY + LG ++LR    PE       L      +  +           
Sbjct: 9   VAINASNYQATKNFYVEKLGFEVLRENHRPEKNDIKLDLKLG-SQELEIFISDQFPARPS 67

Query: 217 YTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFV-DPDG 273
           Y +      +A   + + +    +     E G  I  +P  +     K  +F  DPDG
Sbjct: 68  YPEALGLRHLAFKVEHIEEVIAFL----NEQG--IETEPLRVDDFTGKKMTFFFDPDG 119

>3oxh_A RV0577 protein; kinase regulation, antibiotic resistance, mycobacterium tube structural genomics, PSI, protein structure initiative; HET: PMB XYL; 1.75A {Mycobacterium tuberculosis} Length = 282

 Score =  110 bits (275), Expect = 1e-28
 Identities = 50/255 (19%), Positives = 74/255 (29%), Gaps = 36/255 (14%)

Query: 31  VGDLDRTIKYYTECFGMELLRKRDVPEE--KYSNAFLGFGPEQSYFVVELTYNYGVTSYD 88
             D     K+YT  FG        VP     YS A L         V  +          
Sbjct: 40  TTDQSAAKKFYTSLFGWGY-DDNPVPGGGGVYSMATLNGEA-----VAAIAPMPPGAPEG 93

Query: 89  IGTGFGHLAIATEDVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFELIQRG 148
           +   +    IA +DV  +V+ +   GG V      +       +F+ DP G    L Q  
Sbjct: 94  MPPIWN-TYIAVDDVDAVVDKVVPGGGQVMMPAFDIGDAG-RMSFITDPTGAAVGLWQAN 151

Query: 149 P--------TPEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEE 200
                        L    L       ++ FYE  +G+       +      +   G AE 
Sbjct: 152 RHIGATLVNETGTLIWNELLTDKPDLALAFYEAVVGLTHSSMEIAAGQNYRVLKAGDAEV 211

Query: 201 DQTTVLELAYSYGVTEYTKGN--AYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPI 258
                       G  E        +  V  + DD   +A          GG++  +P  I
Sbjct: 212 -----------GGCMEPPMPGVPNHWHVYFAVDDADATAAKA----AAAGGQVIAEPADI 256

Query: 259 PGLNTKITSFVDPDG 273
           P    +     DP G
Sbjct: 257 PS-VGRFAVLSDPQG 270

>3oxh_A RV0577 protein; kinase regulation, antibiotic resistance, mycobacterium tube structural genomics, PSI, protein structure initiative; HET: PMB XYL; 1.75A {Mycobacterium tuberculosis} Length = 282

 Score = 60.3 bits (146), Expect = 9e-11
 Identities = 24/136 (17%), Positives = 39/136 (28%), Gaps = 14/136 (10%)

Query: 16  WPKKDKRRLLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFV 75
               +   L+         D  + +Y    G+          + Y     G         
Sbjct: 157 TLVNETGTLIWNELLTDKPDLALAFYEAVVGLTHSSMEIAAGQNYRVLKAGDAEV----- 211

Query: 76  VELTYNYGVTSYDIGTGFGH--LAIATEDVYKMVENIRAKGGNVTREPGPLKGMTTHFAF 133
                  G     +     H  +  A +D         A GG V  EP  +  +   FA 
Sbjct: 212 ------GGCMEPPMPGVPNHWHVYFAVDDADATAAKAAAAGGQVIAEPADIPSV-GRFAV 264

Query: 134 VKDPDGYIFELIQRGP 149
           + DP G IF +++  P
Sbjct: 265 LSDPQGAIFSVLKAAP 280

>3oxh_A RV0577 protein; kinase regulation, antibiotic resistance, mycobacterium tube structural genomics, PSI, protein structure initiative; HET: PMB XYL; 1.75A {Mycobacterium tuberculosis} Length = 282

 Score = 48.0 bits (114), Expect = 1e-06
 Identities = 22/115 (19%), Positives = 35/115 (30%), Gaps = 10/115 (8%)

Query: 159 LRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYT 218
           L+  D   + KFY    G         P      +M   A  +   V  +A         
Sbjct: 38  LQTTDQSAAKKFYTSLFGWG-YDDNPVPGGGGVYSM---ATLNGEAVAAIAPMPPGAPEG 93

Query: 219 KGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDG 273
               +    I+ DDV    + V       GG++      I     +++   DP G
Sbjct: 94  MPPIWN-TYIAVDDVDAVVDKV----VPGGGQVMMPAFDIGDA-GRMSFITDPTG 142

>3r6a_A Uncharacterized protein; PSI biology, structural genomics, NEW YORK structural genomi research consortium, putative glyoxalase I; 1.76A {Methanosarcina mazei} Length = 144

 Score =  104 bits (262), Expect = 3e-28
 Identities = 18/133 (13%), Positives = 41/133 (30%), Gaps = 14/133 (10%)

Query: 23  RLLHAVYR--VGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTY 80
           ++L  + R  V DL+  +++Y E     +  + ++P+     A +      +        
Sbjct: 4   KILQILSRLYVADLNPALEFYEELLETPVAMRFEIPQTGVELAQISTILLIA-------- 55

Query: 81  NYGVTSYDIGTGFGHLAIATEDVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGY 140
             G                 + + K    +   G  + R P  +         V+  DG 
Sbjct: 56  --GSEEALKPFRNTQATFLVDSLDKFKTFLEENGAEIIRGPSKVPTG--RNMTVRHSDGS 111

Query: 141 IFELIQRGPTPEP 153
           + E ++       
Sbjct: 112 VIEYVEHSKIEAE 124

>3r6a_A Uncharacterized protein; PSI biology, structural genomics, NEW YORK structural genomi research consortium, putative glyoxalase I; 1.76A {Methanosarcina mazei} Length = 144

 Score = 72.2 bits (177), Expect = 6e-16
 Identities = 28/124 (22%), Positives = 46/124 (37%), Gaps = 16/124 (12%)

Query: 157 VMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTE 216
             L V DL  +++FYE+ L   +    + P+    LA +        T+L +    G  E
Sbjct: 10  SRLYVADLNPALEFYEELLETPVAMRFEIPQTGVELAQIS-------TILLI---AGSEE 59

Query: 217 YTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKT 276
             K     Q     D + K    +    +E G +I R P  +P    +  +    DG   
Sbjct: 60  ALKPFRNTQATFLVDSLDKFKTFL----EENGAEIIRGPSKVPT--GRNMTVRHSDGSVI 113

Query: 277 VLVD 280
             V+
Sbjct: 114 EYVE 117

>3hdp_A Glyoxalase-I; glutathione,lyase, methylglyoxal,11003P,PSI2, structural GENOMIC,NYSGXRC., structural genomics; 2.06A {Clostridium acetobutylicum} PDB: 2qh0_A Length = 133

 Score =  103 bits (258), Expect = 1e-27
 Identities = 26/131 (19%), Positives = 49/131 (37%), Gaps = 10/131 (7%)

Query: 23  RLLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNY 82
           ++ H  Y V ++D  +K +     +E          K    F+  G  +    VEL    
Sbjct: 7   KVHHIGYAVKNIDSALKKFKRLGYVEESEVVRDEVRKVYIQFVINGGYR----VELVAPD 62

Query: 83  GVTS-----YDIGTGFGHLAIATEDVYKMVENIRAKGGNVTREPGPLKGMTTH-FAFVKD 136
           G  S        G+   H+    ED+ K +E +   G  + ++      +     AF+  
Sbjct: 63  GEDSPINKTIKKGSTPYHICYEVEDIQKSIEEMSQIGYTLFKKAEIAPAIDNRKVAFLFS 122

Query: 137 PDGYIFELIQR 147
            D  + EL+++
Sbjct: 123 TDIGLIELLEK 133

>3hdp_A Glyoxalase-I; glutathione,lyase, methylglyoxal,11003P,PSI2, structural GENOMIC,NYSGXRC., structural genomics; 2.06A {Clostridium acetobutylicum} PDB: 2qh0_A Length = 133

 Score = 70.9 bits (174), Expect = 1e-15
 Identities = 16/123 (13%), Positives = 45/123 (36%), Gaps = 14/123 (11%)

Query: 157 VMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTE 216
           +   V ++  ++K +++   ++    +     K  +  +          +EL    G   
Sbjct: 11  IGYAVKNIDSALKKFKRLGYVEESEVVRDEVRKVYIQFVINGG----YRVELVAPDGEDS 66

Query: 217 -----YTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFV-D 270
                  KG+    +    +D+ KS E +     ++G  + ++    P ++ +  +F+  
Sbjct: 67  PINKTIKKGSTPYHICYEVEDIQKSIEEM----SQIGYTLFKKAEIAPAIDNRKVAFLFS 122

Query: 271 PDG 273
            D 
Sbjct: 123 TDI 125

>4g6x_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 1.73A {Catenulispora acidiphila} Length = 155

 Score = 95.6 bits (237), Expect = 1e-24
 Identities = 25/127 (19%), Positives = 51/127 (40%), Gaps = 5/127 (3%)

Query: 23  RLLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNY 82
           R+      V D  +   +YT   G  +     V  +++        P+ +  ++E + + 
Sbjct: 26  RIHLTNVFVDDQAKAESFYTGKLGFLVKADVPVGADRWLTVVSPEAPDGTQLLLEPSSHA 85

Query: 83  GVTSYD---IGTGFGHLAIATEDVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDG 139
            VT +    +  G    + A +D+    E + A G   T+EP  +  +    A + D  G
Sbjct: 86  AVTPFKEALVADGIPAASFAVDDIAAEYERLSALGVRFTQEPTDMGPVV--TAILDDTCG 143

Query: 140 YIFELIQ 146
            + +L+Q
Sbjct: 144 NLIQLMQ 150

>4g6x_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 1.73A {Catenulispora acidiphila} Length = 155

 Score = 62.1 bits (150), Expect = 4e-12
 Identities = 20/123 (16%), Positives = 42/123 (34%), Gaps = 9/123 (7%)

Query: 154 LCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYG 213
           +    + V D  ++  FY   LG  +   +     +    +   A +    +LE +    
Sbjct: 27  IHLTNVFVDDQAKAESFYTGKLGFLVKADVPVGADRWLTVVSPEAPDGTQLLLEPSSHAA 86

Query: 214 VTEYTKGNAYAQV---AISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVD 270
           VT + +      +   + + DD+    E +      LG + T++P  +           D
Sbjct: 87  VTPFKEALVADGIPAASFAVDDIAAEYERL----SALGVRFTQEPTDMGP--VVTAILDD 140

Query: 271 PDG 273
             G
Sbjct: 141 TCG 143

>3e5d_A Putative glyoxalase I; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, lyase; 2.70A {Listeria monocytogenes str} Length = 127

 Score = 94.2 bits (234), Expect = 2e-24
 Identities = 25/126 (19%), Positives = 53/126 (42%), Gaps = 5/126 (3%)

Query: 23  RLLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNY 82
           ++ H      +L++  ++Y   FG       +   + +++ FL F  + +   +    + 
Sbjct: 3   KIEHVALWTTNLEQMKQFYVTYFGATANDLYENKTKGFNSYFLSFE-DGARLEIMSRTDV 61

Query: 83  GVTSYDIGTGFGHLAIA---TEDVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDG 139
              +     G+ H+AI+    E V ++ E +R  G  +  EP    G   + + V DP+G
Sbjct: 62  TGKTTGENLGWAHIAISTGTKEAVDELTEKLRQDGFAIAGEPRM-TGDGYYESVVLDPEG 120

Query: 140 YIFELI 145
              E+ 
Sbjct: 121 NRIEIT 126

>3e5d_A Putative glyoxalase I; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, lyase; 2.70A {Listeria monocytogenes str} Length = 127

 Score = 56.9 bits (137), Expect = 2e-10
 Identities = 27/120 (22%), Positives = 43/120 (35%), Gaps = 9/120 (7%)

Query: 157 VMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTE 216
           V L   +L +  +FY    G       ++         L + +      LE+     VT 
Sbjct: 7   VALWTTNLEQMKQFYVTYFGATANDLYENKTKGFNSYFLSFEDG---ARLEIMSRTDVTG 63

Query: 217 YTKGNA--YAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFV-DPDG 273
            T G    +A +AIST       E+   + ++ G  I     P    +    S V DP+G
Sbjct: 64  KTTGENLGWAHIAISTGTKEAVDELTEKL-RQDGFAIAG--EPRMTGDGYYESVVLDPEG 120

>3kol_A Oxidoreductase, glyoxalase/bleomycin resistance protein/dioxygenase; metal ION binding, NYSGXRC, PSI2, structural genomics; 1.90A {Nostoc punctiforme pcc 73102} Length = 156

 Score = 94.2 bits (234), Expect = 5e-24
 Identities = 27/140 (19%), Positives = 43/140 (30%), Gaps = 12/140 (8%)

Query: 22  RRLLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEE--------KYSNAFLGFGPEQSY 73
           R++ H    V D+  +  +Y    G+  L   +VP          K +N     G     
Sbjct: 18  RKVHHIALNVQDMQASRYFYGTILGLHELTDDEVPATLTELVASGKVANFITPDGTILDL 77

Query: 74  FVVELTYNYGVTSYDIGTGFGHLAIATEDVY--KMVENIRAKGGNVTREPGPLKGMTTHF 131
           F                T   HLA   +     + V  I      +    GP+   T   
Sbjct: 78  FGEPELSPPDPNPEKTFTRAYHLAFDIDPQLFDRAVTVIGENK--IAIAHGPVTRPTGRG 135

Query: 132 AFVKDPDGYIFELIQRGPTP 151
            +  DPDG++ E+       
Sbjct: 136 VYFYDPDGFMIEIRCDPEAE 155

>3kol_A Oxidoreductase, glyoxalase/bleomycin resistance protein/dioxygenase; metal ION binding, NYSGXRC, PSI2, structural genomics; 1.90A {Nostoc punctiforme pcc 73102} Length = 156

 Score = 57.2 bits (138), Expect = 2e-10
 Identities = 26/125 (20%), Positives = 39/125 (31%), Gaps = 12/125 (9%)

Query: 157 VMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALA---MLGYAEEDQTTVLELAYSYG 213
           + L V D+  S  FY   LG+  L   + P     L     +        T+L+L     
Sbjct: 23  IALNVQDMQASRYFYGTILGLHELTDDEVPATLTELVASGKVANFITPDGTILDLFGEPE 82

Query: 214 VTE-----YTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSF 268
           ++               +A   D       V  +   E    I    GP+     +   F
Sbjct: 83  LSPPDPNPEKTFTRAYHLAFDIDPQLFDRAVTVI--GENKIAIA--HGPVTRPTGRGVYF 138

Query: 269 VDPDG 273
            DPDG
Sbjct: 139 YDPDG 143

>2rk9_A Glyoxalase/bleomycin resistance protein/dioxygena; NYSGXRC, structural genomics, protein structur initiative II; 1.60A {Vibrio splendidus} Length = 145

 Score = 88.2 bits (218), Expect = 7e-22
 Identities = 20/133 (15%), Positives = 45/133 (33%), Gaps = 16/133 (12%)

Query: 25  LHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQ----SYFVVELTY 80
           +       D++ +  ++ +  G E+  +R  P+E++   +L                  +
Sbjct: 7   VVPELYCFDINVSQSFFVDVLGFEVKYER--PDEEF--VYLTLDGVDVMLEGIAGKSRKW 62

Query: 81  NYGVTSYDIGTGFGHLAIATEDVYKMVENIRAKGGNVTREPGPLK-------GMTTHFAF 133
             G   + +G+G  +      D+  + + +     +        K         T     
Sbjct: 63  LSGDLEFPLGSGV-NFQWDVIDIEPLYQRVNESAADSIYLALESKSYQCGDSIATQKQFM 121

Query: 134 VKDPDGYIFELIQ 146
           V+ PDGY+F   Q
Sbjct: 122 VQTPDGYLFRFCQ 134

>2rk9_A Glyoxalase/bleomycin resistance protein/dioxygena; NYSGXRC, structural genomics, protein structur initiative II; 1.60A {Vibrio splendidus} Length = 145

 Score = 52.7 bits (126), Expect = 6e-09
 Identities = 17/121 (14%), Positives = 33/121 (27%), Gaps = 8/121 (6%)

Query: 158 MLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEE--DQTTVLELAYSYGVT 215
            L   D+  S  F+   LG ++    + P+ +     L   +   +        +  G  
Sbjct: 10  ELYCFDINVSQSFFVDVLGFEVKY--ERPDEEFVYLTLDGVDVMLEGIAGKSRKWLSGDL 67

Query: 216 EYTKGNAYAQVAISTDDVYKS-AEVVNLVTQELGGKITRQPGPIPGLNTKITSF--VDPD 272
           E+  G+          D+      V       +   +  +             F    PD
Sbjct: 68  EFPLGSGVN-FQWDVIDIEPLYQRVNESAADSIYLALESKSYQCGDSIATQKQFMVQTPD 126

Query: 273 G 273
           G
Sbjct: 127 G 127

>1ss4_A Glyoxalase family protein; structural genomics, PSI, prote structure initiative, midwest center for structural genomic unknown function; HET: CIT GSH; 1.84A {Bacillus cereus} SCOP: d.32.1.6 Length = 153

 Score = 84.9 bits (210), Expect = 1e-20
 Identities = 22/144 (15%), Positives = 48/144 (33%), Gaps = 22/144 (15%)

Query: 22  RRLLHAVYRVGDLDRTIKYYTECFGMELLRKRDV-----------PEEKYSNAFLGFGPE 70
            R+ +    V  LD  I ++ E  G+ L  + +V             +    A +     
Sbjct: 10  LRMDNVSIVVESLDNAISFFEE-IGLNLEGRANVEGEWAGRVTGLGSQCVEIAMMVTPDG 68

Query: 71  QSYFVVELTYNYGVTSYDI-------GTGFGHLAIATEDVYKMVENIRAKGGNVTREPGP 123
            S   +EL+      +            G+  +    ED+ +MV  +   G  +  E   
Sbjct: 69  HS--RIELSRFLTPPTIADHRTAPVNALGYLRVMFTVEDIDEMVSRLTKHGAELVGEVVQ 126

Query: 124 LKGMTTHFAFVKDPDGYIFELIQR 147
            +  +    +++  +G +  L + 
Sbjct: 127 YEN-SYRLCYIRGVEGILIGLAEE 149

>1ss4_A Glyoxalase family protein; structural genomics, PSI, prote structure initiative, midwest center for structural genomic unknown function; HET: CIT GSH; 1.84A {Bacillus cereus} SCOP: d.32.1.6 Length = 153

 Score = 54.5 bits (131), Expect = 2e-09
 Identities = 20/135 (14%), Positives = 45/135 (33%), Gaps = 26/135 (19%)

Query: 157 VMLRVGDLGRSIKFYEKALGMKLLRTIDS-----------PELKCALAMLGYAEEDQTTV 205
           V + V  L  +I F+E  +G+ L    +                  +AM+     D  + 
Sbjct: 15  VSIVVESLDNAISFFE-EIGLNLEGRANVEGEWAGRVTGLGSQCVEIAMMVT--PDGHSR 71

Query: 206 LEL-AYSYGVTEYTKGNA------YAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPI 258
           +EL  +    T      A      Y +V  + +D+ +    +     + G ++  +    
Sbjct: 72  IELSRFLTPPTIADHRTAPVNALGYLRVMFTVEDIDEMVSRL----TKHGAELVGEVVQY 127

Query: 259 PGLNTKITSFVDPDG 273
              + ++      +G
Sbjct: 128 EN-SYRLCYIRGVEG 141

>3r4q_A Lactoylglutathione lyase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.51A {Agrobacterium tumefaciens} Length = 160

 Score = 79.8 bits (197), Expect = 2e-18
 Identities = 21/134 (15%), Positives = 38/134 (28%), Gaps = 14/134 (10%)

Query: 22  RRLLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVE---- 77
             ++       DLD    +Y + FG+E++ K           F   G +           
Sbjct: 7   SAIMETALYADDLDAAEAFYRDVFGLEMVLKLP-----GQLVFFKCGRQMLLLFDPQESS 61

Query: 78  LTYNYGVTSYDIGTGFGHLAI---ATEDVYKMVENIRAKGGNVTREPGPLKGMTTHFAFV 134
                         G GH         +V +      A    V        G  ++  ++
Sbjct: 62  RADANNPIPRHGAVGQGHFCFYADDKAEVDEWKTRFEALEIPVEHYHRWPNG--SYSVYI 119

Query: 135 KDPDGYIFELIQRG 148
           +DP G   E+ +  
Sbjct: 120 RDPAGNSVEVGEGK 133

>3r4q_A Lactoylglutathione lyase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.51A {Agrobacterium tumefaciens} Length = 160

 Score = 45.9 bits (109), Expect = 2e-06
 Identities = 18/119 (15%), Positives = 32/119 (26%), Gaps = 8/119 (6%)

Query: 157 VMLRVGDLGRSIKFYEKALGMKLLRTIDSPE--LKCALAMLGYAEEDQTTVLELAYSYGV 214
             L   DL  +  FY    G++++  +       KC   ML   +  ++     A +   
Sbjct: 12  TALYADDLDAAEAFYRDVFGLEMVLKLPGQLVFFKCGRQMLLLFDPQES---SRADANNP 68

Query: 215 TEYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDG 273
                           DD  +  E      + L   +           +      DP G
Sbjct: 69  IPRHGAVGQGHFCFYADDKAEVDEWKTRF-EALEIPVE--HYHRWPNGSYSVYIRDPAG 124

>2r6u_A Uncharacterized protein; structural genomics, PSI-2, RHA04853, MCSG, protein structur initiative, midwest center for structural genomics; 1.50A {Rhodococcus SP} Length = 148

 Score = 78.0 bits (192), Expect = 5e-18
 Identities = 25/118 (21%), Positives = 42/118 (35%), Gaps = 5/118 (4%)

Query: 31  VGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTSYDIG 90
             D DR   +Y + FG  +    ++P+  YS    G   E          N G+      
Sbjct: 33  FDDGDRARAFYRDAFGWAI---AEIPDMDYSMVTTGPVGESGMPDEPGYINGGMMQRGEV 89

Query: 91  TGFGHLAIATEDVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFELIQRG 148
           T    + +  E +   +E I + GG       P+  M    A+  D +G +  L +  
Sbjct: 90  TTPV-VTVDVESIESALERIESLGGKTVTGRTPVGNMGF-AAYFTDSEGNVVGLWETA 145

>2r6u_A Uncharacterized protein; structural genomics, PSI-2, RHA04853, MCSG, protein structur initiative, midwest center for structural genomics; 1.50A {Rhodococcus SP} Length = 148

 Score = 64.5 bits (157), Expect = 5e-13
 Identities = 20/124 (16%), Positives = 42/124 (33%), Gaps = 9/124 (7%)

Query: 150 TPEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELA 209
               +    +   D  R+  FY  A G  +    + P++  ++   G   E         
Sbjct: 22  MTGRIVHFEIPFDDGDRARAFYRDAFGWAI---AEIPDMDYSMVTTGPVGESGMPDEPGY 78

Query: 210 YSYGVTEYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFV 269
            + G+ +  +      V +  + +  + E +    + LGGK      P+  +      F 
Sbjct: 79  INGGMMQRGEVTT-PVVTVDVESIESALERI----ESLGGKTVTGRTPVGNM-GFAAYFT 132

Query: 270 DPDG 273
           D +G
Sbjct: 133 DSEG 136

>1twu_A Hypothetical protein YYCE; structural genomics, protein structure initiative, MCSG, DUP of the alpha-beta sandwichs. bacillus subtilis, PSI; 2.00A {Bacillus subtilis} SCOP: d.32.1.8 Length = 139

 Score = 75.7 bits (186), Expect = 3e-17
 Identities = 18/121 (14%), Positives = 38/121 (31%), Gaps = 8/121 (6%)

Query: 30  RVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTSYDI 89
             G LD  I++Y E   ++ + +       Y     G       + +E T   G ++  +
Sbjct: 18  PTGQLDEIIRFYEEGLCLKRIGEFSQHNG-YDGVMFGLPHAD--YHLEFTQYEGGSTAPV 74

Query: 90  GTGFGHLAIA---TEDVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFELIQ 146
                 L        ++  +   ++  G        P          ++DPDG+    + 
Sbjct: 75  PHPDSLLVFYVPNAVELAAITSKLKHMGYQEVESENPYWSN--GGVTIEDPDGWRIVFMN 132

Query: 147 R 147
            
Sbjct: 133 S 133

>1twu_A Hypothetical protein YYCE; structural genomics, protein structure initiative, MCSG, DUP of the alpha-beta sandwichs. bacillus subtilis, PSI; 2.00A {Bacillus subtilis} SCOP: d.32.1.8 Length = 139

 Score = 68.4 bits (167), Expect = 1e-14
 Identities = 22/123 (17%), Positives = 45/123 (36%), Gaps = 6/123 (4%)

Query: 160 RVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTK 219
             G L   I+FYE+ L +K +             M G         LE     G +    
Sbjct: 18  PTGQLDEIIRFYEEGLCLKRIGEFSQHN-GYDGVMFGL--PHADYHLEFTQYEGGSTAPV 74

Query: 220 GNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLV 279
            +  + +     +  + A + + + + +G +        P  +    +  DPDGW+ V +
Sbjct: 75  PHPDSLLVFYVPNAVELAAITSKL-KHMGYQEVESEN--PYWSNGGVTIEDPDGWRIVFM 131

Query: 280 DNE 282
           +++
Sbjct: 132 NSK 134

>2qqz_A Glyoxalase family protein, putative; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; HET: MSE; 1.92A {Bacillus anthracis str} Length = 126

 Score = 73.3 bits (180), Expect = 1e-16
 Identities = 22/123 (17%), Positives = 43/123 (34%), Gaps = 12/123 (9%)

Query: 25  LHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGV 84
           +     VG  +    +Y E  GME + K +   +K    +   G ++ +  VE  +N   
Sbjct: 14  VQVAAPVGCEEEARAFYGETIGMEEIPKPEEL-KKRGGCWFKCGNQEIHIGVEQNFNPA- 71

Query: 85  TSYDIGTGFGHLAIATEDVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFEL 144
                     H A     + +  + +  +G  V  +      +     +V DP G   E 
Sbjct: 72  -------KRAHPAFYVLKIDEFKQELIKQGIEVIDDH-ARPDV--IRFYVSDPFGNRIEF 121

Query: 145 IQR 147
           ++ 
Sbjct: 122 MEN 124

>2qqz_A Glyoxalase family protein, putative; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; HET: MSE; 1.92A {Bacillus anthracis str} Length = 126

 Score = 44.1 bits (104), Expect = 5e-06
 Identities = 18/118 (15%), Positives = 37/118 (31%), Gaps = 16/118 (13%)

Query: 156 QVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVT 215
           QV   VG    +  FY + +GM+ +   +  + +         +E     + +    GV 
Sbjct: 15  QVAAPVGCEEEARAFYGETIGMEEIPKPEELKKRGGCWFKCGNQE-----IHI----GVE 65

Query: 216 EYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDG 273
           +       A  A     + +  + +     + G ++       P          DP G
Sbjct: 66  QNFNPAKRAHPAFYVLKIDEFKQEL----IKQGIEVIDDH-ARPD--VIRFYVSDPFG 116

>3huh_A Virulence protein STM3117; structural genomics, nysgrc, target 13955A1BCT15P1, dioxygenase, PSI-2, protein structure initiative; 1.50A {Salmonella enterica subsp} PDB: 3hnq_A Length = 152

 Score = 71.2 bits (174), Expect = 2e-15
 Identities = 27/127 (21%), Positives = 47/127 (37%), Gaps = 8/127 (6%)

Query: 22  RRLLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYN 81
            R+ H V  V D+  TI++Y E  G   +  +       +   L FG ++     +    
Sbjct: 22  DRIDHLVLTVSDISTTIRFYEEVLGFSAVTFKQ------NRKALIFGAQKINLHQQEMEF 75

Query: 82  YGVTSYDIGTGFGHLAIATEDVYKMVENIRAKGGNVTREPGPLKGMTTHFA--FVKDPDG 139
               S           I +  +  +V  I   G ++   P    G T      +++DPDG
Sbjct: 76  EPKASRPTPGSADLCFITSTPINDVVSEILQAGISIVEGPVERTGATGEIMSIYIRDPDG 135

Query: 140 YIFELIQ 146
            + E+ Q
Sbjct: 136 NLIEISQ 142

>3huh_A Virulence protein STM3117; structural genomics, nysgrc, target 13955A1BCT15P1, dioxygenase, PSI-2, protein structure initiative; 1.50A {Salmonella enterica subsp} PDB: 3hnq_A Length = 152

 Score = 44.6 bits (105), Expect = 4e-06
 Identities = 24/119 (20%), Positives = 39/119 (32%), Gaps = 12/119 (10%)

Query: 157 VMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTE 216
           ++L V D+  +I+FYE+ LG   +      + + AL             +E         
Sbjct: 27  LVLTVSDISTTIRFYEEVLGFSAVT---FKQNRKALIFGAQKINLHQQEMEFEPKASRPT 83

Query: 217 YTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITS--FVDPDG 273
               +     +   +DV            + G  I   P    G   +I S    DPDG
Sbjct: 84  PGSADLCFITSTPINDVVSEI-------LQAGISIVEGPVERTGATGEIMSIYIRDPDG 135

>3ghj_A Putative integron gene cassette protein; integron cassette protein, mobIle metagenome, structural genomics, PSI-2; 1.47A {Uncultured bacterium} Length = 141

 Score = 70.0 bits (172), Expect = 3e-15
 Identities = 23/127 (18%), Positives = 48/127 (37%), Gaps = 17/127 (13%)

Query: 22  RRLLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVV-ELTY 80
           + L     +V +L+++ ++YTE  G E          ++   FL         V+ E   
Sbjct: 27  KGLFEVAVKVKNLEKSSQFYTEILGFEAGLLD--SARRW--NFLWVSGRAGMVVLQEEKE 82

Query: 81  NYGVTSYDIGTGFGHLA--IATEDVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPD 138
           N+            H +  +   ++  + + + +KG +V   P   + M     +  DP+
Sbjct: 83  NWQQQ---------HFSFRVEKSEIEPLKKALESKGVSV-HGPVNQEWMQAVSLYFADPN 132

Query: 139 GYIFELI 145
           G+  E  
Sbjct: 133 GHALEFT 139

>3ghj_A Putative integron gene cassette protein; integron cassette protein, mobIle metagenome, structural genomics, PSI-2; 1.47A {Uncultured bacterium} Length = 141

 Score = 42.7 bits (101), Expect = 2e-05
 Identities = 8/29 (27%), Positives = 16/29 (55%)

Query: 157 VMLRVGDLGRSIKFYEKALGMKLLRTIDS 185
           V ++V +L +S +FY + LG +      +
Sbjct: 32  VAVKVKNLEKSSQFYTEILGFEAGLLDSA 60

>1r9c_A Glutathione transferase; fosfomycin resistance protein, Mn binding, antibiotic resist transferase; 1.83A {Mesorhizobium loti} SCOP: d.32.1.2 Length = 139

 Score = 68.8 bits (168), Expect = 1e-14
 Identities = 23/124 (18%), Positives = 38/124 (30%), Gaps = 8/124 (6%)

Query: 22  RRLLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPE-EKYSNAFLGFGPEQSYFVVELTY 80
             L H  + V DL+R  +     F    +   D  +       F   G       + +  
Sbjct: 3   EGLSHMTFIVRDLERMTRILEGVFDAREVYASDTEQFSLSREKFFLIGD------IWVAI 56

Query: 81  NYGVTSYDIGTGFGHLAIATEDVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGY 140
             G    +         I   D  +  E +   G ++ R P P         +  D D +
Sbjct: 57  MQGEKLAERSYNHIAFKIDDADFDRYAERVGKLGLDM-RPPRPRVEGEGRSIYFYDDDNH 115

Query: 141 IFEL 144
           +FEL
Sbjct: 116 MFEL 119

>1r9c_A Glutathione transferase; fosfomycin resistance protein, Mn binding, antibiotic resist transferase; 1.83A {Mesorhizobium loti} SCOP: d.32.1.2 Length = 139

 Score = 46.4 bits (110), Expect = 1e-06
 Identities = 20/117 (17%), Positives = 37/117 (31%), Gaps = 10/117 (8%)

Query: 157 VMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTE 216
           +   V DL R  +  E     + +    S   + +L+   +        + +A   G   
Sbjct: 8   MTFIVRDLERMTRILEGVFDAREVY--ASDTEQFSLSREKFFLIGD---IWVAIMQGEKL 62

Query: 217 YTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDG 273
             +   +    I   D  + AE V     +LG  +      + G   +   F D D 
Sbjct: 63  AERSYNHIAFKIDDADFDRYAERV----GKLGLDMRPPRPRVEG-EGRSIYFYDDDN 114

>1xqa_A Glyoxalase/bleomycin resistance protein; dioxygenase, structural GEN midwest center for structural genomics, MCSG; HET: P6G; 1.80A {Bacillus cereus atcc 14579} SCOP: d.32.1.2 Length = 113

 Score = 67.0 bits (164), Expect = 2e-14
 Identities = 23/125 (18%), Positives = 41/125 (32%), Gaps = 19/125 (15%)

Query: 23  RLLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNY 82
            + H    V D+    ++  + FG+     R        NAF         F++ L    
Sbjct: 3   GIKHLNLTVADVVAAREFLEKYFGLTCSGTRG-------NAFAVMRDNDG-FILTLMKGK 54

Query: 83  GVTSYDIGTGFGHLAIAT---EDVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDG 139
            V          H+       E V K+ + ++  G     EP        +  +V+ P G
Sbjct: 55  EVQ----YPKTFHVGFPQESEEQVDKINQRLKEDG--FLVEPPK--HAHAYTFYVEAPGG 106

Query: 140 YIFEL 144
           +  E+
Sbjct: 107 FTIEV 111

>1xqa_A Glyoxalase/bleomycin resistance protein; dioxygenase, structural GEN midwest center for structural genomics, MCSG; HET: P6G; 1.80A {Bacillus cereus atcc 14579} SCOP: d.32.1.2 Length = 113

 Score = 43.9 bits (104), Expect = 4e-06
 Identities = 21/119 (17%), Positives = 38/119 (31%), Gaps = 17/119 (14%)

Query: 157 VMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTE 216
           + L V D+  + +F EK  G+    T  +              ++   +L L     V +
Sbjct: 7   LNLTVADVVAAREFLEKYFGLTCSGTRGNA--------FAVMRDNDGFILTLMKGKEV-Q 57

Query: 217 YTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWK 275
           Y K         S + V K  + +    +E G  +     P    +        P G+ 
Sbjct: 58  YPKTFHVGFPQESEEQVDKINQRL----KEDGFLV----EPPKHAHAYTFYVEAPGGFT 108

>3ct8_A Protein BH2160, putative glyoxalase; NP_243026.1, glyoxalase/bleomycin resis protein/dioxygenase superfamily, structural genomics; HET: UNL; 2.10A {Bacillus halodurans c-125} Length = 146

 Score = 67.6 bits (165), Expect = 3e-14
 Identities = 27/130 (20%), Positives = 47/130 (36%), Gaps = 12/130 (9%)

Query: 23  RLLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNY 82
            L H    V  L+ +I ++    G                    +   ++Y V   T + 
Sbjct: 20  MLHHVEINVDHLEESIAFWDWLLGELGYEDYQSWSR-----GKSYKHGKTYLVFVQTEDR 74

Query: 83  GVTSY--DIGTGFGHLAIAT---EDVYKMVENIRAKGGNVTREP-GPLKGMTTHFA-FVK 135
             T       TG  HLA      E V ++ + ++ +G  +  E   P  G   H+A F +
Sbjct: 75  FQTPTFHRKRTGLNHLAFHAASREKVDELTQKLKERGDPILYEDRHPFAGGPNHYAVFCE 134

Query: 136 DPDGYIFELI 145
           DP+    E++
Sbjct: 135 DPNRIKVEIV 144

>3ct8_A Protein BH2160, putative glyoxalase; NP_243026.1, glyoxalase/bleomycin resis protein/dioxygenase superfamily, structural genomics; HET: UNL; 2.10A {Bacillus halodurans c-125} Length = 146

 Score = 42.2 bits (99), Expect = 4e-05
 Identities = 24/119 (20%), Positives = 36/119 (30%), Gaps = 6/119 (5%)

Query: 157 VMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTE 216
           V + V  L  SI F++  LG        S     +            T           +
Sbjct: 24  VEINVDHLEESIAFWDWLLGELGYEDYQSWSRGKSYKHGKTYLVFVQTEDRFQTPTFHRK 83

Query: 217 YTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQP-GPIPGLNTKITSFV-DPDG 273
            T  N  A  A S + V +  + +    +E G  I  +   P  G       F  DP+ 
Sbjct: 84  RTGLNHLAFHAASREKVDELTQKL----KERGDPILYEDRHPFAGGPNHYAVFCEDPNR 138

>2rk0_A Glyoxalase/bleomycin resistance protein/dioxygena; 11002Z, glyoxylase, dioxygenas PSI-II; 2.04A {Frankia SP} Length = 136

 Score = 67.0 bits (164), Expect = 4e-14
 Identities = 23/131 (17%), Positives = 40/131 (30%), Gaps = 8/131 (6%)

Query: 22  RRLLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYN 81
             + H    V DLD + ++YTE    + L +     +  S A        S  + E    
Sbjct: 4   SGVSHVSLTVRDLDISCRWYTEILDWKELVRGR--GDTTSFAHGVLPGGLSIVLREHDGG 61

Query: 82  YGVTSYDIGTGFGHLAIAT---EDVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPD 138
                 +   G  HL+ +     D+  + E +   G   T      +         +D D
Sbjct: 62  GTDLFDETRPGLDHLSFSVESMTDLDVLEERLAKAGAAFT---PTQELPFGWILAFRDAD 118

Query: 139 GYIFELIQRGP 149
               E +    
Sbjct: 119 NIALEAMLGRE 129

>2rk0_A Glyoxalase/bleomycin resistance protein/dioxygena; 11002Z, glyoxylase, dioxygenas PSI-II; 2.04A {Frankia SP} Length = 136

 Score = 42.0 bits (99), Expect = 3e-05
 Identities = 19/117 (16%), Positives = 32/117 (27%), Gaps = 6/117 (5%)

Query: 157 VMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTE 216
           V L V DL  S ++Y + L  K L          + A           + E         
Sbjct: 9   VSLTVRDLDISCRWYTEILDWKELVRGRGDTT--SFAHGVLPGGLSIVLREHDGGGTDLF 66

Query: 217 YTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDG 273
                    ++ S + +     +   +  + G   T            I +F D D 
Sbjct: 67  DETRPGLDHLSFSVESMTDLDVLEERL-AKAGAAFT---PTQELPFGWILAFRDADN 119

>1npb_A Fosfomycin-resistance protein; manganese binding, potassium binding loop, transferase; 2.50A {Serratia marcescens} SCOP: d.32.1.2 Length = 141

 Score = 66.7 bits (163), Expect = 6e-14
 Identities = 25/127 (19%), Positives = 48/127 (37%), Gaps = 17/127 (13%)

Query: 22  RRLLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYN 81
           + L H    V DL +++ ++ E  G+ L  + +      + A+L  G       V L+Y+
Sbjct: 3   QSLNHLTLAVSDLQKSVTFWHELLGLTLHARWN------TGAYLTCGDLW----VCLSYD 52

Query: 82  YG---VTSYDIGTGFGHLAIATEDVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPD 138
                V   +         +A ED   + + +   G  + ++            +  DPD
Sbjct: 53  EARQYVPPQESDYTHYAFTVAEEDFEPLSQRLEQAGVTIWKQN----KSEGASFYFLDPD 108

Query: 139 GYIFELI 145
           G+  EL 
Sbjct: 109 GHKLELH 115

>1npb_A Fosfomycin-resistance protein; manganese binding, potassium binding loop, transferase; 2.50A {Serratia marcescens} SCOP: d.32.1.2 Length = 141

 Score = 38.6 bits (90), Expect = 4e-04
 Identities = 9/29 (31%), Positives = 17/29 (58%)

Query: 157 VMLRVGDLGRSIKFYEKALGMKLLRTIDS 185
           + L V DL +S+ F+ + LG+ L    ++
Sbjct: 8   LTLAVSDLQKSVTFWHELLGLTLHARWNT 36

>1mpy_A Catechol 2,3-dioxygenase; extradiol dioxygenase, non heme iron dioxygenase, metapyrocatechase, oxidoreductase; 2.80A {Pseudomonas putida} SCOP: d.32.1.3 d.32.1.3 Length = 307

 Score = 69.1 bits (169), Expect = 9e-14
 Identities = 39/287 (13%), Positives = 78/287 (27%), Gaps = 64/287 (22%)

Query: 22  RRLLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYN 81
            R  H   RV D+ + +++Y E  G+       +  +     +L    E   F + L   
Sbjct: 6   MRPGHVQLRVLDMSKALEHYVELLGLIE-----MDRDDQGRVYLKAWTEVDKFSLVLR-- 58

Query: 82  YGVTSYDIGTGFGHLAIAT---EDVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPD 138
                     G   +       + + ++  ++ A G  V + P             + P 
Sbjct: 59  -----EADEPGMDFMGFKVVDEDALRQLERDLMAYGCAVEQLPAGELNSCGRRVRFQAPS 113

Query: 139 GYIFELI----------------------QRGPTPEPLCQVMLRVGDLGRSIKFYEKALG 176
           G+ FEL                        +G         ++   +L  +   + K LG
Sbjct: 114 GHHFELYADKEYTGKWGLNDVNPEAWPRDLKGMAAVRFDHALMYGDELPATYDLFTKVLG 173

Query: 177 MKLLRTIDSPELKCALAMLGYAEEDQTTVLELA--------YSYGVTEYTKGNAYAQVAI 228
             L   +           L  + +                  S+ +              
Sbjct: 174 FYLAEQVLDENGTRVAQFLSLSTKAHDVAFIHHPEKGRLHHVSFHLE------------- 220

Query: 229 STDDVYKSAEVVNLVTQELGGKITRQPGP-IPGLNTKITSFVDPDGW 274
           + +D+ ++A+++          I   P          I  F DP G 
Sbjct: 221 TWEDLLRAADLI----SMTDTSIDIGPTRHGLTHGKTIY-FFDPSGN 262

>1mpy_A Catechol 2,3-dioxygenase; extradiol dioxygenase, non heme iron dioxygenase, metapyrocatechase, oxidoreductase; 2.80A {Pseudomonas putida} SCOP: d.32.1.3 d.32.1.3 Length = 307

 Score = 47.5 bits (113), Expect = 2e-06
 Identities = 23/150 (15%), Positives = 44/150 (29%), Gaps = 19/150 (12%)

Query: 4   ASPAVANAELLEWPKKDK----RRLLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEK 59
               + +     WP+  K     R  HA+    +L  T   +T+  G  L  +       
Sbjct: 127 GKWGLNDVNPEAWPRDLKGMAAVRFDHALMYGDELPATYDLFTKVLGFYLAEQVLDENGT 186

Query: 60  YSNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHLAIAT---EDVYKMVENIRAKGGN 116
               FL    +         ++     +       H++      ED+ +  + I     +
Sbjct: 187 RVAQFLSLSTK--------AHDVAFIHHPEKGRLHHVSFHLETWEDLLRAADLISMTDTS 238

Query: 117 VTREPG--PLKGMTTHFAFVKDPDGYIFEL 144
           +   P    L        +  DP G   E+
Sbjct: 239 IDIGPTRHGLTHGK--TIYFFDPSGNRNEV 266

>3bqx_A Glyoxalase-related enzyme; VOC superfamily, PSI-2, STRU genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; 1.40A {Fulvimarina pelagi} Length = 150

 Score = 64.7 bits (157), Expect = 4e-13
 Identities = 27/124 (21%), Positives = 52/124 (41%), Gaps = 5/124 (4%)

Query: 22  RRLLHAVYRVGDLDRTIKYYTECFGMELLRKRD-VPEEKYSNAFLGFGPEQSYFVVELTY 80
           +++      +GDL+ + ++Y E FG   + +   +   + +   L     Q+   ++   
Sbjct: 4   QQVAVITLGIGDLEASARFYGEGFGWAPVFRNPEIIFYQMNGFVLATWLVQN---LQEDV 60

Query: 81  NYGVTSYDIGTGFGHLAIATEDVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGY 140
              VTS        H   A  +V  ++E + A GG + R             +V DPDG+
Sbjct: 61  GVAVTSRPGSMALAHNVRAETEVAPLMERLVAAGGQLLRPADAPPHG-GLRGYVADPDGH 119

Query: 141 IFEL 144
           I+E+
Sbjct: 120 IWEI 123

>3bqx_A Glyoxalase-related enzyme; VOC superfamily, PSI-2, STRU genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; 1.40A {Fulvimarina pelagi} Length = 150

 Score = 51.2 bits (122), Expect = 2e-08
 Identities = 23/120 (19%), Positives = 39/120 (32%), Gaps = 13/120 (10%)

Query: 157 VMLRVGDLGRSIKFYEKALGMKLLRTIDSPE-LKCALAMLGYAEEDQTTVLELAYSYGVT 215
           + L +GDL  S +FY +  G   +         +    +L            L    GV 
Sbjct: 9   ITLGIGDLEASARFYGEGFGWAPVFRNPEIIFYQMNGFVLATWLVQ-----NLQEDVGVA 63

Query: 216 EYTKGNAY--AQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDG 273
             ++  +   A    +  +V    E +       GG++ R     P    +     DPDG
Sbjct: 64  VTSRPGSMALAHNVRAETEVAPLMERL----VAAGGQLLRPADAPPHGGLRGY-VADPDG 118

>3rri_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-biology, midwest center for structu genomics; 1.50A {Alicyclobacillus acidocaldarius subsp} Length = 135

 Score = 63.6 bits (154), Expect = 8e-13
 Identities = 17/132 (12%), Positives = 34/132 (25%), Gaps = 11/132 (8%)

Query: 17  PKKDKRRLLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVV 76
             ++   + H      DLD    +Y    G +L R+            +         V 
Sbjct: 3   AMRNPNDVFHLAIPARDLDEAYDFYVTKLGCKLARRYP--------DRITLDFFGDQLVC 54

Query: 77  ELTYNYGVTSYDIGTGFGHLAIATEDVYKMVENIRAKGGNVTREP---GPLKGMTTHFAF 133
            L+  +          FG      +    + +  + +G     +               F
Sbjct: 55  HLSDRWDREVSMYPRHFGITFRDKKHFDNLYKLAKQRGIPFYHDLSRRFEGLIEEHETFF 114

Query: 134 VKDPDGYIFELI 145
           + DP   + E  
Sbjct: 115 LIDPSNNLLEFK 126

>3rri_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-biology, midwest center for structu genomics; 1.50A {Alicyclobacillus acidocaldarius subsp} Length = 135

 Score = 38.2 bits (88), Expect = 6e-04
 Identities = 16/117 (13%), Positives = 31/117 (26%), Gaps = 9/117 (7%)

Query: 157 VMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTE 216
           + +   DL  +  FY   LG KL R       +  L   G        V  L+  +    
Sbjct: 13  LAIPARDLDEAYDFYVTKLGCKLAR---RYPDRITLDFFGD-----QLVCHLSDRWDREV 64

Query: 217 YTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDG 273
                 +              ++           ++R+   +   +      +DP  
Sbjct: 65  SMYPRHFGITFRDKKHFDNLYKLAKQRGIPFYHDLSRRFEGLIEEHETFF-LIDPSN 120

>1nki_A Probable fosfomycin resistance protein; potassium binding loop, manganese binding, transferase; 0.95A {Pseudomonas aeruginosa} SCOP: d.32.1.2 PDB: 1lqo_A 1lqk_A 1lqp_A 1nnr_A Length = 135

 Score = 62.9 bits (153), Expect = 1e-12
 Identities = 27/125 (21%), Positives = 38/125 (30%), Gaps = 18/125 (14%)

Query: 22  RRLLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYN 81
             L H    V DL  +I +Y +  G  L  + D        A+L  G         L  +
Sbjct: 3   TGLNHLTLAVADLPASIAFYRDLLGFRLEARWD------QGAYLELGSLW------LCLS 50

Query: 82  YGVTSYDIGTGFGHLA--IATEDVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDG 139
                      + H A  IA  D  +    +RA G                  +  DPDG
Sbjct: 51  REPQYGGPAADYTHYAFGIAAADFARFAAQLRAHG----VREWKQNRSEGDSFYFLDPDG 106

Query: 140 YIFEL 144
           +  E 
Sbjct: 107 HRLEA 111

>1nki_A Probable fosfomycin resistance protein; potassium binding loop, manganese binding, transferase; 0.95A {Pseudomonas aeruginosa} SCOP: d.32.1.2 PDB: 1lqo_A 1lqk_A 1lqp_A 1nnr_A Length = 135

 Score = 39.0 bits (91), Expect = 3e-04
 Identities = 12/29 (41%), Positives = 14/29 (48%)

Query: 157 VMLRVGDLGRSIKFYEKALGMKLLRTIDS 185
           + L V DL  SI FY   LG +L    D 
Sbjct: 8   LTLAVADLPASIAFYRDLLGFRLEARWDQ 36

>1f1u_A Homoprotocatechuate 2,3-dioxygenase; extradiol, manganese, biodegradation, aromatic, oxidoreductase; 1.50A {Arthrobacter globiformis} SCOP: d.32.1.3 d.32.1.3 PDB: 1f1r_A 1f1v_A* 1f1x_A Length = 323

 Score = 65.8 bits (160), Expect = 1e-12
 Identities = 40/273 (14%), Positives = 79/273 (28%), Gaps = 34/273 (12%)

Query: 17  PKKDKRRLLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVV 76
           P  D  R  +    V DL ++ ++Y +  G+ +  + +      +  +L    E  +  +
Sbjct: 11  PAPDIVRCAYMEIVVTDLAKSREFYVDVLGLHVTEEDE------NTIYLRSLEEFIHHNL 64

Query: 77  ELTYNYGVTSYDIGTGFGHLAIATEDVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKD 136
            L    G  +      +     +  +V       +  G    R              V+D
Sbjct: 65  VLR--QGPIAAVAAFAYR--VKSPAEVDAAEAYYKELGCRTERRKEGFTKGIGDSVRVED 120

Query: 137 PDGYIFELI---------------QRGPTPEPLCQVMLRVGDLGRSIKFYEKALGMKLLR 181
           P G+ +E                         L        D+ R   + E  LG ++  
Sbjct: 121 PLGFPYEFFYETEHVERLTQRYDLYSAGELVRLDHFNQVTPDVPRGRAYLE-DLGFRVSE 179

Query: 182 TIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAISTDDVYKSAEVVN 241
            I   +     A +   +    T L       +      +  A       ++ +  +   
Sbjct: 180 DIKDSDGVTYAAWMHRKQTVHDTALTGGNGPRM------HHVAFATHEKHNIIQICD--K 231

Query: 242 LVTQELGGKITRQPGPIPGLNTKITSFVDPDGW 274
           +    +  +I R PG     N      +DPDG 
Sbjct: 232 MGALRISDRIERGPGRHGVSNAFYLYILDPDGH 264

>1f1u_A Homoprotocatechuate 2,3-dioxygenase; extradiol, manganese, biodegradation, aromatic, oxidoreductase; 1.50A {Arthrobacter globiformis} SCOP: d.32.1.3 d.32.1.3 PDB: 1f1r_A 1f1v_A* 1f1x_A Length = 323

 Score = 39.2 bits (91), Expect = 8e-04
 Identities = 24/128 (18%), Positives = 49/128 (38%), Gaps = 15/128 (11%)

Query: 22  RRLLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYN 81
            RL H      D+ R   Y  E  G  +       +     A++              ++
Sbjct: 151 VRLDHFNQVTPDVPRGRAYL-EDLGFRVSEDIKDSDGVTYAAWMHRKQT--------VHD 201

Query: 82  YGVTSYDIGTGFGHLAIAT---EDVYKMVENIRAKGGNVTREPGPLKGMTTH--FAFVKD 136
             +T  + G    H+A AT    ++ ++ + + A   +   E GP +   ++  + ++ D
Sbjct: 202 TALTGGN-GPRMHHVAFATHEKHNIIQICDKMGALRISDRIERGPGRHGVSNAFYLYILD 260

Query: 137 PDGYIFEL 144
           PDG+  E+
Sbjct: 261 PDGHRIEI 268

>2qnt_A AGR_C_3434P, uncharacterized protein ATU1872; glyoxalase/bleomycin resistance protein/dioxygenase family R protein, PSI-2, MCSG; HET: MSE EPE; 1.40A {Agrobacterium tumefaciens str} Length = 141

 Score = 62.2 bits (151), Expect = 2e-12
 Identities = 27/146 (18%), Positives = 50/146 (34%), Gaps = 13/146 (8%)

Query: 23  RLLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNY 82
           R ++ +  V D++R+  +Y +  G+++L         +     GF   +   + E  +  
Sbjct: 8   RFVNPIPFVRDINRSKSFYRDRLGLKILED----FGSFVLFETGFAIHEGRSLEETIWRT 63

Query: 83  GVTSYDI-GTGFGHLAIATEDVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYI 141
              + +  G     L     DV    ++I A    +             F    DPDG+ 
Sbjct: 64  SSDAQEAYGRRNMLLYFEHADVDAAFQDI-APHVELIHPLERQAWGQRVF-RFYDPDGHA 121

Query: 142 FELIQRGPTPEPLCQVMLRVGDLGRS 167
            E+       E L Q    +   G S
Sbjct: 122 IEVG------ESLSQSGENLYFQGGS 141

>2qnt_A AGR_C_3434P, uncharacterized protein ATU1872; glyoxalase/bleomycin resistance protein/dioxygenase family R protein, PSI-2, MCSG; HET: MSE EPE; 1.40A {Agrobacterium tumefaciens str} Length = 141

 Score = 53.4 bits (128), Expect = 4e-09
 Identities = 21/121 (17%), Positives = 40/121 (33%), Gaps = 11/121 (9%)

Query: 154 LCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSP-ELKCALAMLGYAEEDQTTVLELAYSY 212
               +  V D+ RS  FY   LG+K+L    S    +   A+     E ++    +  + 
Sbjct: 9   FVNPIPFVRDINRSKSFYRDRLGLKILEDFGSFVLFETGFAIH----EGRSLEETIWRTS 64

Query: 213 GVTEYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPD 272
              +   G     +     DV  + + +         ++            ++  F DPD
Sbjct: 65  SDAQEAYGRRNMLLYFEHADVDAAFQDI-----APHVELIHPLERQAW-GQRVFRFYDPD 118

Query: 273 G 273
           G
Sbjct: 119 G 119

>3ey7_A Biphenyl-2,3-DIOL 1,2-dioxygenase III-related protein; integron cassette protein mobIle metagenome structural genomics, oxidoreductase, PSI-2; HET: MSE; 1.60A {Vibrio cholerae} PDB: 3ey8_A* Length = 133

 Score = 61.9 bits (150), Expect = 3e-12
 Identities = 24/126 (19%), Positives = 47/126 (37%), Gaps = 10/126 (7%)

Query: 22  RRLLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYN 81
             L H V  V D+  T  +Y +  GM+ +              L FG ++     +L   
Sbjct: 9   SHLDHLVLTVADIPTTTNFYEKVLGMKAVSFGAGR------IALEFGHQKINL-HQLGNE 61

Query: 82  YGVTSYDIGTGFGHLA-IATEDVYKMVENIRAKGGNVTREPGPLKGMT--THFAFVKDPD 138
           +   + ++  G   L  I    +   ++++  +G  +   P    G        + +DPD
Sbjct: 62  FEPKAQNVRVGSADLCFITDTVLSDAMKHVEDQGVTIMEGPVKRTGAQGAITSFYFRDPD 121

Query: 139 GYIFEL 144
           G + E+
Sbjct: 122 GNLIEV 127

>3pkv_A Toxoflavin lyase (TFLA); metalloenzyme, vicinal oxygen chelate superfamily; 1.34A {Paenibacillus polymyxa} PDB: 3pkw_A 3pkx_A* 3oul_A 3oum_A* Length = 252

 Score = 63.9 bits (155), Expect = 4e-12
 Identities = 31/184 (16%), Positives = 58/184 (31%), Gaps = 32/184 (17%)

Query: 22  RRLLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYN 81
             +        +LDR + +YT   G + + ++           +  G  Q  F       
Sbjct: 25  TSIKQLTLYTAELDRMLAFYTNMLGAQHVHEQA------DAFTIQLGVSQIQF------- 71

Query: 82  YGVTSYDIGTGFGHLA--IATEDVYKMVENIRAKGGNVTREPGPLK---GMTTHFAFVKD 136
               + D    F H+A  IA     +    +   G  +T              +  +V+D
Sbjct: 72  --RAAADGTKPFYHIAINIAANHFQEGKAWLSGFGELLTENDEDQAYFPFFNAYSCYVED 129

Query: 137 PDGYIFELIQRGPTPEP------------LCQVMLRVGDLGRSIKFYEKALGMKLLRTID 184
           P G I ELI R                  + ++ +   D+ ++    ++A     L  I+
Sbjct: 130 PSGNIIELISRQQAAPVLDKPFSADQLLSIGEINITTSDVEQAATRLKQAELPVKLDQIE 189

Query: 185 SPEL 188
              L
Sbjct: 190 PAGL 193

>3zw5_A Glyoxalase domain-containing protein 5; lyase; 1.60A {Homo sapiens} Length = 147

 Score = 61.6 bits (149), Expect = 4e-12
 Identities = 27/127 (21%), Positives = 54/127 (42%), Gaps = 10/127 (7%)

Query: 22  RRLLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYN 81
           RRL H V  V  +  T  +Y++  GME++  ++          L FG +Q + + E+   
Sbjct: 26  RRLDHIVMTVKSIKDTTMFYSKILGMEVMTFKE------DRKALCFG-DQKFNLHEVGKE 78

Query: 82  YGVTSYDIGTGFGHLA-IATEDVYKMVENIRAKGGNVTREPGPLKGMTTHFA--FVKDPD 138
           +   +     G   +  I    + +M+++++A    +   P P  G        + +DPD
Sbjct: 79  FEPKAAHPVPGSLDICLITEVPLEEMIQHLKACDVPIEEGPVPRTGAKGPIMSIYFRDPD 138

Query: 139 GYIFELI 145
             + E+ 
Sbjct: 139 RNLIEVS 145

>3zw5_A Glyoxalase domain-containing protein 5; lyase; 1.60A {Homo sapiens} Length = 147

 Score = 42.4 bits (99), Expect = 3e-05
 Identities = 19/119 (15%), Positives = 39/119 (32%), Gaps = 12/119 (10%)

Query: 157 VMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTE 216
           +++ V  +  +  FY K LGM+++   +          L + ++                
Sbjct: 31  IVMTVKSIKDTTMFYSKILGMEVMTFKEDR------KALCFGDQKFNLHEVGKEFEPKAA 84

Query: 217 YTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITS--FVDPDG 273
           +    +     I+   + +  + +    +     I   P P  G    I S  F DPD 
Sbjct: 85  HPVPGSLDICLITEVPLEEMIQHL----KACDVPIEEGPVPRTGAKGPIMSIYFRDPDR 139

>3lm4_A Catechol 2,3-dioxygenase; NYSGXRC, PSI-II, protein structure initiative, 2hydroxyl 6 OXO 6 phenyl hexa 2-4 dienoic acid, peroxide; HET: HPX; 1.80A {Rhodococcus jostii} Length = 339

 Score = 64.6 bits (157), Expect = 4e-12
 Identities = 22/182 (12%), Positives = 56/182 (30%), Gaps = 36/182 (19%)

Query: 22  RRLLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYN 81
             L  A         T+ ++T+  GM +  +         + +L    +   + +++T  
Sbjct: 10  AHLARAELFSPKPQETLDFFTKFLGMYVTHREG------QSVYLRGYEDPYPWSLKIT-- 61

Query: 82  YGVTSYDIGTGFGHLAIATEDVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYI 141
               +            + E + +  +++     + T       G    F + + PDG+ 
Sbjct: 62  EAPEAGMGHAAMR--TSSPEALERRAKSLTDGNVDGTWSEDQF-GYGKTFEY-QSPDGHN 117

Query: 142 FELI------------------------QRGPTPEPLCQVMLRVGDLGRSIKFYEKALGM 177
            +L+                         +G   + +  + L   D+      +E+ LG 
Sbjct: 118 LQLLWEAEKYVAPPELRSKILTRPSKKPLQGIPVKRIDHLNLMSSDVTAVKDSFERHLGF 177

Query: 178 KL 179
           + 
Sbjct: 178 RT 179

>3lm4_A Catechol 2,3-dioxygenase; NYSGXRC, PSI-II, protein structure initiative, 2hydroxyl 6 OXO 6 phenyl hexa 2-4 dienoic acid, peroxide; HET: HPX; 1.80A {Rhodococcus jostii} Length = 339

 Score = 41.1 bits (96), Expect = 2e-04
 Identities = 20/128 (15%), Positives = 32/128 (25%), Gaps = 14/128 (10%)

Query: 22  RRLLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYN 81
           +R+ H      D+      +    G     +R V       A++                
Sbjct: 152 KRIDHLNLMSSDVTAVKDSFERHLGFRT-TERVVDGNVEIGAWMSSNLLG------HEVA 204

Query: 82  YGVTSYDIGTGFGHLAIAT---EDVYKMVENIRAKGGNVTREPG--PLKGMTTHFAFVKD 136
                        HLA      +     VE  R     +   P    +      F +V +
Sbjct: 205 CMRDMTGGHGKLHHLAFFYGTGQHNIDAVEMFRDYDIQIEAGPDKHGITQSQ--FLYVFE 262

Query: 137 PDGYIFEL 144
           P G   EL
Sbjct: 263 PGGNRIEL 270

>2p7o_A Glyoxalase family protein; fosfomycin resistance protein, Mn binding, antibiotic resist metal binding protein, hydrolase; 1.44A {Listeria monocytogenes} PDB: 2p7k_A 2p7l_A 2p7m_A 2p7p_A 2p7q_A Length = 133

 Score = 61.0 bits (148), Expect = 5e-12
 Identities = 23/124 (18%), Positives = 40/124 (32%), Gaps = 8/124 (6%)

Query: 22  RRLLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPE-EKYSNAFLGFGPEQSYFVVELTY 80
             L H    V DL++T  +    F  E +              F           + +  
Sbjct: 3   SGLSHITLIVKDLNKTTAFLQNIFNAEEIYSSGDKTFSLSKEKFFLIAG------LWICI 56

Query: 81  NYGVTSYDIGTGFGHLAIATEDVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGY 140
             G +  +         I +E+V +  E I+A G  + +   P         +  D D +
Sbjct: 57  MEGDSLQERTYNHIAFQIQSEEVDEYTERIKALGVEM-KPERPRVQGEGRSIYFYDFDNH 115

Query: 141 IFEL 144
           +FEL
Sbjct: 116 LFEL 119

>2p7o_A Glyoxalase family protein; fosfomycin resistance protein, Mn binding, antibiotic resist metal binding protein, hydrolase; 1.44A {Listeria monocytogenes} PDB: 2p7k_A 2p7l_A 2p7m_A 2p7p_A 2p7q_A Length = 133

 Score = 45.6 bits (108), Expect = 2e-06
 Identities = 18/117 (15%), Positives = 42/117 (35%), Gaps = 10/117 (8%)

Query: 157 VMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTE 216
           + L V DL ++  F +     + +    S +   +L+   +        L +    G + 
Sbjct: 8   ITLIVKDLNKTTAFLQNIFNAEEIY--SSGDKTFSLSKEKFFLIAG---LWICIMEGDSL 62

Query: 217 YTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDG 273
             +   +    I +++V +  E +    + LG ++ +   P      +   F D D 
Sbjct: 63  QERTYNHIAFQIQSEEVDEYTERI----KALGVEM-KPERPRVQGEGRSIYFYDFDN 114

>1jc4_A Methylmalonyl-COA epimerase; vicinal oxygen chelate superfamily, isomerase; 2.00A {Propionibacterium freudenreichiisubsp} SCOP: d.32.1.4 PDB: 1jc5_A Length = 148

 Score = 61.2 bits (148), Expect = 6e-12
 Identities = 29/137 (21%), Positives = 49/137 (35%), Gaps = 14/137 (10%)

Query: 23  RLLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFL--GFGPEQSYFVVELTY 80
            + H  Y   D D   KYY E FG   L + + PE+      +       +    V++  
Sbjct: 9   CIDHVAYACPDADEASKYYQETFGWHELHREENPEQGVVEIMMAPAAKLTEHMTQVQVMA 68

Query: 81  NYGVTS--------YDIGTGFGHLAIATEDVYKMVENIRAKGGNVTREPGPLKG-MTTHF 131
                S        ++   G  H+A   +D+  +   +R +G  +  +  P  G      
Sbjct: 69  PLNDESTVAKWLAKHNGRAGLHHMAWRVDDIDAVSATLRERGVQLLYDE-PKLGTGGNRI 127

Query: 132 AFV--KDPDGYIFELIQ 146
            F+  K   G + EL Q
Sbjct: 128 NFMHPKSGKGVLIELTQ 144

>3eck_A Protein (homoprotocatechuate 2,3-dioxygenase); oxidoreductase, extradiol, FEII, crystal packing; HET: XXG; 1.60A {Brevibacterium fuscum} SCOP: d.32.1.3 d.32.1.3 PDB: 3ecj_A* 3ojn_A* 1q0o_A 1q0c_A 2iga_A* 2ig9_A 3ojj_A* 3bza_A* 3ojk_A* 3ojt_A* Length = 365

 Score = 64.3 bits (156), Expect = 6e-12
 Identities = 47/273 (17%), Positives = 81/273 (29%), Gaps = 34/273 (12%)

Query: 17  PKKDKRRLLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVV 76
           P  D  R  +A   V DL ++  +Y +  G+ +  + +      +  +L    E  +  +
Sbjct: 11  PAPDILRCAYAELVVTDLAKSRNFYVDVLGLHVSYEDE------NQIYLRSFEEFIHHNL 64

Query: 77  ELTYNYGVTSYDIGTGFGHLAIATEDVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKD 136
            LT   G  +      F       EDV K     +  G    R              V+D
Sbjct: 65  VLT--KGPVAALKAMAFR--VRTPEDVDKAEAYYQELGCRTERRKDGFVKGIGDALRVED 120

Query: 137 PDGYIFELI---------------QRGPTPEPLCQVMLRVGDLGRSIKFYEKALGMKLLR 181
           P G+ +E                         L        D+ R  K+ E  LG ++  
Sbjct: 121 PLGFPYEFFFETTHVERLHMRYDLYSAGELVRLDHFNQVTPDVPRGRKYLED-LGFRVTE 179

Query: 182 TIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAISTDDVYKSAEVVN 241
            I   E     A +             A + G     + +  A       ++ +  +   
Sbjct: 180 DIQDDEGTTYAAWMHRKGTVHD----TALTGG--NGPRLHHVAFSTHEKHNIIQICD--K 231

Query: 242 LVTQELGGKITRQPGPIPGLNTKITSFVDPDGW 274
           +    +  +I R PG     N      +DPD  
Sbjct: 232 MGALRISDRIERGPGRHGVSNAFYLYILDPDNH 264

>2rbb_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-2, PROT structure initiative; 1.82A {Burkholderia phytofirmans} Length = 141

 Score = 61.1 bits (148), Expect = 7e-12
 Identities = 23/132 (17%), Positives = 45/132 (34%), Gaps = 12/132 (9%)

Query: 19  KDKRRLLHAVYRVGDLDRTIKYYTECFGMELLRKRDVP---EEKYSNAFLGFGPEQSYFV 75
           K+   L +      D+     +Y + FG + +     P         + +GF   ++Y +
Sbjct: 4   KNMADLSYVNIFTRDIVAMSAFYQQVFGFQEIESIRSPIFRGLDTGKSCIGFNAHEAYEL 63

Query: 76  VELTYNYGVTSYDIGTGFGHLAIAT---EDVYKMVENIRAKGGNVTREPGPLKGMTTHFA 132
           ++L         +       L       E V K+V    A G  + + P          A
Sbjct: 64  MQLAQFS-----ETSGIKFLLNFDVDTKEAVDKLVPVAIAAGATLIKAPYETYYHWYQ-A 117

Query: 133 FVKDPDGYIFEL 144
            + DP+  +F +
Sbjct: 118 VLLDPERNVFRI 129

>2rbb_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-2, PROT structure initiative; 1.82A {Burkholderia phytofirmans} Length = 141

 Score = 50.7 bits (121), Expect = 3e-08
 Identities = 21/122 (17%), Positives = 40/122 (32%), Gaps = 14/122 (11%)

Query: 157 VMLRVGDLGRSIKFYEKALGMKLLRTIDSP---ELKCALAMLGYAEEDQTTVLELAYSYG 213
           V +   D+     FY++  G + + +I SP    L    + +G+   +     EL     
Sbjct: 12  VNIFTRDIVAMSAFYQQVFGFQEIESIRSPIFRGLDTGKSCIGF---NAHEAYELMQLAQ 68

Query: 214 VTEYTKGNAYAQVAISTDDVYKSAEVVNLVTQ--ELGGKITRQPGPIPGLNTKITSFVDP 271
            +E +       +    D       V  LV      G  + + P      +      +DP
Sbjct: 69  FSETSGI--KFLLNFDVDTK---EAVDKLVPVAIAAGATLIKAPYETYY-HWYQAVLLDP 122

Query: 272 DG 273
           + 
Sbjct: 123 ER 124

>3hpy_A Catechol 2,3-dioxygenase; repeated motifs, aromatic hydrocarbons catabolism, iron, oxidoreductase; 1.94A {Pseudomonas SP} PDB: 3hpv_A 3hq0_A* Length = 309

 Score = 63.3 bits (154), Expect = 1e-11
 Identities = 31/185 (16%), Positives = 55/185 (29%), Gaps = 41/185 (22%)

Query: 22  RRLLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFL-GFGPEQSYFVVELTY 80
            R  HA  RV +L+  I +Y    G+          +     +   +        +    
Sbjct: 7   LRPGHAQVRVLNLEEGIHFYRNVLGLVE-----TGRDDQGRVYFKCWDERDHSCYI---- 57

Query: 81  NYGVTSYDIGTGFGHLAIAT---EDVYKMVENIRAKGGNVTREP-GPLKGMTTHFAFVKD 136
              +   D   G             + K+  +++A G   TR P G +        F + 
Sbjct: 58  ---IREAD-TAGIDFFGFKVLDKATLEKLDADLQAYGLTTTRIPAGEMLETGERVRF-EL 112

Query: 137 PDGYIFELI----------------------QRGPTPEPLCQVMLRVGDLGRSIKFYEKA 174
           P G++ EL                       + G  P  L   +L   ++    K + + 
Sbjct: 113 PSGHLIELYAEKTCVGNGISEVNPAPWNAQREHGIAPIQLDHCLLYGPNIAEVQKIFTEV 172

Query: 175 LGMKL 179
           LG  L
Sbjct: 173 LGFYL 177

>3hpy_A Catechol 2,3-dioxygenase; repeated motifs, aromatic hydrocarbons catabolism, iron, oxidoreductase; 1.94A {Pseudomonas SP} PDB: 3hpv_A 3hq0_A* Length = 309

 Score = 43.7 bits (103), Expect = 3e-05
 Identities = 21/129 (16%), Positives = 37/129 (28%), Gaps = 16/129 (12%)

Query: 22  RRLLHAVYRVGDLDRTIKYYTECFGMEL-LRKRDVPEEKYSNAFLGFGPEQSYFVVELTY 80
            +L H +    ++    K +TE  G  L  R      +     +L    +         +
Sbjct: 150 IQLDHCLLYGPNIAEVQKIFTEVLGFYLVERVLSPDGDSDMGIWLSCSHKV--------H 201

Query: 81  NYGVTSYDIGTGFGHLAIAT---EDVYKMVENIRAKGGNVTREPG--PLKGMTTHFAFVK 135
           +     Y       H +      E V +  + +     NV   P    +        +  
Sbjct: 202 DIAFVEYPEKGKLHHCSFLLESWEQVLRAGDIMSMNEVNVDIGPTRHGVTRGC--TIYAW 259

Query: 136 DPDGYIFEL 144
           DP G  FE 
Sbjct: 260 DPSGNRFET 268

>3b59_A Glyoxalase/bleomycin resistance protein/dioxygena; 11004Z, NYSGXRC, PSI-2, structural genomics, Pro structure initiative; 2.53A {Novosphingobium aromaticivorans} Length = 310

 Score = 61.8 bits (150), Expect = 3e-11
 Identities = 36/175 (20%), Positives = 66/175 (37%), Gaps = 31/175 (17%)

Query: 22  RRLLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFL-GFGPEQSYFVVELTY 80
             + +  Y V D D    +Y + +G+E + +        +NA+    G ++ + V     
Sbjct: 7   TEIRYVGYGVKDFDAEKAFYADVWGLEPVGEDA------NNAWFKAQGADEHHVVQ---- 56

Query: 81  NYGVTSYDIGTGFGHLAIAT---EDVYKMVENIRAKGGNVTREPGPLKGMTTHFAF-VKD 136
              +   D       +A+A     DV  +  ++ A G  V  EP  L      + F    
Sbjct: 57  ---LRRAD-ENRIDVIALAADSRSDVDALRASVEAAGCKVASEPAVLATPGGGYGFRFFS 112

Query: 137 PDGYIFEL-----------IQRGPT-PEPLCQVMLRVGDLGRSIKFYEKALGMKL 179
           PDG +FE+           + R    P  +  ++L   +    +KF+   LG K+
Sbjct: 113 PDGLLFEVSSDVAKGAKRDLARWEGVPVKISHIVLHSPNHQDMVKFFTDVLGFKV 167

>1lgt_A Biphenyl-2,3-DIOL 1,2-dioxygenase; extradiol dioxygenase, 2,3-dihydroxybiphenyl, non-heme iron, anaerobic, PCB biodegradation; HET: BP3; 1.70A {Burkholderia xenovorans} SCOP: d.32.1.3 d.32.1.3 PDB: 1kmy_A* 1knd_A 1knf_A 1han_A* 1lkd_A* Length = 297

 Score = 61.4 bits (149), Expect = 4e-11
 Identities = 28/183 (15%), Positives = 50/183 (27%), Gaps = 42/183 (22%)

Query: 22  RRLLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFL-GFGPEQSYFVVELTY 80
           R L +  + V D+     + T+  G+      D      +              V +   
Sbjct: 3   RSLGYMGFAVSDVAAWRSFLTQKLGLMEAGTTD------NGDLFRIDSRAWRIAVQQ--- 53

Query: 81  NYGVTSYDIGTGFGHLAIAT---EDVYKMVENIRAKGGNVTREPGPL---KGMTTHFAFV 134
                                    + +M + ++  G  VT     L   +G+T    F 
Sbjct: 54  -------GEVDDLAFAGYEVADAAGLAQMADKLKQAGIAVTTGDASLARRRGVTGLITFA 106

Query: 135 KDPDGYIFELI------------------QRGPTPEPLCQVMLRVGDLGRSIKFYEKALG 176
            DP G   E+                         + L   +  V D  +++ FY   LG
Sbjct: 107 -DPFGLPLEIYYGASEVFEKPFLPGAAVSGFLTGEQGLGHFVRCVPDSDKALAFYTDVLG 165

Query: 177 MKL 179
            +L
Sbjct: 166 FQL 168

>2pjs_A AGR_C_3564P, uncharacterized protein ATU1953; glyoxalase/bleomycin resistance protein/dioxygenase superfamily, structural genomics; 1.85A {Agrobacterium tumefaciens str} SCOP: d.32.1.2 Length = 119

 Score = 56.7 bits (137), Expect = 1e-10
 Identities = 20/126 (15%), Positives = 39/126 (30%), Gaps = 13/126 (10%)

Query: 23  RLLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNY 82
           R + A     +  R   +Y +  GM +                   P +++  V      
Sbjct: 7   RRVVANIATPEPARAQAFYGDILGMPVAMDHGWI------VTHA-SPLEAHAQVSFAREG 59

Query: 83  GVTSYDIGTGFGHLAIATEDVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIF 142
           G      GT    L+I  ++  ++   I   G  +   P           F++DP G + 
Sbjct: 60  GS-----GTDVPDLSIEVDNFDEVHARILKAGLPIEYGPVTEAWGVQRL-FLRDPFGKLI 113

Query: 143 ELIQRG 148
            ++   
Sbjct: 114 NILSHA 119

>3itw_A Protein TIOX; bleomycin resistance fold, bisintercalator, solvent-exposed residue, thiocoraline, protein binding, peptide binding Pro; 2.15A {Micromonospora SP} Length = 137

 Score = 56.7 bits (137), Expect = 2e-10
 Identities = 23/129 (17%), Positives = 41/129 (31%), Gaps = 14/129 (10%)

Query: 30  RVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTSYDI 89
              D DR + +    FG  LL ++        +A L  G      +V  T      S   
Sbjct: 9   AYTDPDRAVDWLVRVFGFRLLLRQP-AIGTIRHADLDTG--GGIVMVRRTGEPYTVSCAG 65

Query: 90  GTGFGHLAIATEDVYKMVENIRAKGGNVTREPGPLKGMTTHF-----AFVKDPDGYIFEL 144
           G     + +   DV +      A G ++ +                   V+D +G+++E 
Sbjct: 66  GHTCKQVIVWVSDVDEHFMRSTAAGADIVQPL------QDKPWGLRQYLVRDLEGHLWEF 119

Query: 145 IQRGPTPEP 153
            +      P
Sbjct: 120 TRHLRDVPP 128

>3itw_A Protein TIOX; bleomycin resistance fold, bisintercalator, solvent-exposed residue, thiocoraline, protein binding, peptide binding Pro; 2.15A {Micromonospora SP} Length = 137

 Score = 41.7 bits (98), Expect = 4e-05
 Identities = 19/117 (16%), Positives = 33/117 (28%), Gaps = 8/117 (6%)

Query: 157 VMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTE 216
           V L   D  R++ +  +  G +LL    +       A L         ++          
Sbjct: 6   VELAYTDPDRAVDWLVRVFGFRLLLRQPAIG-TIRHADLDTG--GGIVMVRRTGEPYTVS 62

Query: 217 YTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDG 273
              G+   QV +   DV +            G  I +     P    +     D +G
Sbjct: 63  CAGGHTCKQVIVWVSDVDEHFMRS----TAAGADIVQPLQDKPW-GLRQYLVRDLEG 114

>1zsw_A Metallo protein, glyoxalase family protein; hypothetical protein from glyoxalase family, structural GENO PSI, protein structure initiative; 1.65A {Bacillus cereus} SCOP: d.32.1.10 d.32.1.10 Length = 338

 Score = 59.3 bits (143), Expect = 2e-10
 Identities = 26/192 (13%), Positives = 52/192 (27%), Gaps = 36/192 (18%)

Query: 22  RRLLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYN 81
           +   H      + +    +Y    G+  + K  V ++  S   L +G +      EL++ 
Sbjct: 29  KGHHHISMVTKNANENNHFYKNVLGLRRV-KMTVNQDDPSMYHLFYGDKTGSPGTELSFF 87

Query: 82  Y--GVTSYDIGTG-FGHLAIAT---EDVYKMVENIRAKGGNVTREPGPLKGMTTHFA--- 132
               V     GT     + +     + ++   E         +        MTT+     
Sbjct: 88  EIPLVGRTYRGTNAITRIGLLVPSEDSLHYWKERFEKFDVKHS-------EMTTYANRPA 140

Query: 133 -FVKDPDGYIFELIQRGPTPEPLCQ------------------VMLRVGDLGRSIKFYEK 173
              +D +G    L+          +                  V L V  L +      +
Sbjct: 141 LQFEDAEGLRLVLLVSNGEKVEHWETWEKSEVPAKHQIQGMGSVELTVRRLDKMASTLTE 200

Query: 174 ALGMKLLRTIDS 185
             G   +   D 
Sbjct: 201 IFGYTEVSRNDQ 212

>1zsw_A Metallo protein, glyoxalase family protein; hypothetical protein from glyoxalase family, structural GENO PSI, protein structure initiative; 1.65A {Bacillus cereus} SCOP: d.32.1.10 d.32.1.10 Length = 338

 Score = 50.0 bits (119), Expect = 3e-07
 Identities = 26/136 (19%), Positives = 44/136 (32%), Gaps = 20/136 (14%)

Query: 21  KRRLLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTY 80
            + +      V  LD+     TE FG        V        F     E    +V    
Sbjct: 178 IQGMGSVELTVRRLDKMASTLTEIFGYTE-----VSRNDQEAIFQSIKGEAFGEIVVKYL 232

Query: 81  NYGVTSYDIGTGFGHLAIAT---EDVYKMVENIRAKGGNVTREPGPLKGMTTHFAF---- 133
           +        G    HLAI      ++    E ++ +G + +       G+   F F    
Sbjct: 233 DGPTEKPGRG-SIHHLAIRVKNDAELAYWEEQVKQRGFHSS-------GIIDRFYFKSLY 284

Query: 134 VKDPDGYIFELIQRGP 149
            ++ +G +FE+   GP
Sbjct: 285 FRESNGILFEIATDGP 300

>3gm5_A Lactoylglutathione lyase and related lyases; sheet-helix-sheet-sheet-sheet motif, isomerase; HET: CIT; 2.00A {Thermoanaerobacter tengcongensis} Length = 159

 Score = 56.8 bits (137), Expect = 3e-10
 Identities = 31/147 (21%), Positives = 56/147 (38%), Gaps = 29/147 (19%)

Query: 22  RRLLHAVYRVGDLDRTIKYYTECFGMELLRKRDVP--------------EEKYSNAFLGF 67
           R  +     V D++ +++ Y E FG+E  +                   + +   AF   
Sbjct: 18  RNTVQIGIVVRDIEESLQNYAEFFGVEKPQWFWTDDYSKAHTKFNGRPTKARAKLAFFEL 77

Query: 68  GPEQSYFVVELTYNYGVTSY------DIGTGFGHLAIATEDVYKMVENIRAKGGNVTREP 121
           GP Q    +EL       S         G G  H+A   +D+ + VE +  KG  V ++ 
Sbjct: 78  GPLQ----LELIEPDENPSTWREFLDKNGEGIHHIAFVVKDMDRKVEELYRKGMKVIQK- 132

Query: 122 GPLKGMTTHFAFV--KDPDGYIFELIQ 146
           G  +G    +A++        + EL++
Sbjct: 133 GDFEG--GRYAYIDTLRALKVMIELLE 157

>1sp8_A 4-hydroxyphenylpyruvate dioxygenase; oxidoreductase; 2.00A {Zea mays} SCOP: d.32.1.3 d.32.1.3 Length = 418

 Score = 58.4 bits (140), Expect = 6e-10
 Identities = 36/284 (12%), Positives = 76/284 (26%), Gaps = 53/284 (18%)

Query: 26  HAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVT 85
           H      D       ++   G  L  + D+     ++A L        F+    Y +G  
Sbjct: 34  HVELWCADAASAAGRFSFGLGAPLAARSDLSTGNSAHASLLLRSGSLSFLFTAPYAHGAD 93

Query: 86  SYDI-----------------GTGFGHLAIATEDVYKMVENIRAKGGNVTREPGPLK--- 125
           +                    G     +A+   D         A G      P  L    
Sbjct: 94  AATAALPSFSAAAARRFAADHGLAVRAVALRVADAEDAFRASVAAGARPAFGPVDLGRGF 153

Query: 126 --------GMTTHFAFVKDPDGYI-------FELIQRGPTPEP----LCQVMLRVGDLGR 166
                   G      +V  PDG         FE +      +        ++  V +L  
Sbjct: 154 RLAEVELYGDVVLR-YVSYPDGAAGEPFLPGFEGVASPGAADYGLSRFDHIVGNVPELAP 212

Query: 167 SIKFYEKALGMKLLRTIDSPELK------CALAMLGYAEEDQTTVLELAYSYGVT----- 215
           +  ++    G        + ++        ++ +   +E     + E  +          
Sbjct: 213 AAAYFAGFTGFHEFAEFTTEDVGTAESGLNSMVLANNSENVLLPLNEPVHGTKRRSQIQT 272

Query: 216 --EYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGP 257
             ++  G     +A+++DDV ++   +   +   G +    P  
Sbjct: 273 FLDHHGGPGVQHMALASDDVLRTLREMQARSAMGGFEFMAPPTS 316

>3g12_A Putative lactoylglutathione lyase; glyoxalase, bleomycin resistance, PSI-2, NYSGXRC, structural genomics; 2.58A {Bdellovibrio bacteriovorus HD100} Length = 128

 Score = 54.2 bits (130), Expect = 1e-09
 Identities = 19/124 (15%), Positives = 30/124 (24%), Gaps = 10/124 (8%)

Query: 23  RLLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNY 82
            +         L   + +Y    G +    +     +   A              L    
Sbjct: 6   LITSITINTSHLQGMLGFY-RIIGFQFTASKVDKGSEVHRAVHNG------VEFSLYSIQ 58

Query: 83  GVTSYDIGTGFGHLAIATEDVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIF 142
                        L     D+ K V+ +    G       P        A V DPDG+  
Sbjct: 59  NPQRS--QIPSLQLGFQITDLEKTVQELVKIPG-AMCILDPTDMPDGKKAIVLDPDGHSI 115

Query: 143 ELIQ 146
           EL +
Sbjct: 116 ELCE 119

>3g12_A Putative lactoylglutathione lyase; glyoxalase, bleomycin resistance, PSI-2, NYSGXRC, structural genomics; 2.58A {Bdellovibrio bacteriovorus HD100} Length = 128

 Score = 41.9 bits (98), Expect = 3e-05
 Identities = 18/118 (15%), Positives = 33/118 (27%), Gaps = 14/118 (11%)

Query: 156 QVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVT 215
            + +    L   + FY   +G +   +              +          L YS    
Sbjct: 9   SITINTSHLQGMLGFYR-IIGFQFTASKVDK------GSEVHRAVHNGVEFSL-YSIQNP 60

Query: 216 EYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDG 273
           +        Q+     D+    + V  + +  G      P  +P     I   +DPDG
Sbjct: 61  Q-RSQIPSLQLGFQITDL---EKTVQELVKIPGAMCILDPTDMPDGKKAI--VLDPDG 112

>2zyq_A Probable biphenyl-2,3-DIOL 1,2-dioxygenase BPHC; extradiol, DHSA, TB, catechol, cholesterol, steroid, aromatic hydrocarbons catabolism; HET: TAR; 2.00A {Mycobacterium tuberculosis} PDB: 2zi8_A* Length = 300

 Score = 55.8 bits (134), Expect = 3e-09
 Identities = 39/277 (14%), Positives = 69/277 (24%), Gaps = 41/277 (14%)

Query: 22  RRLLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYN 81
           R L +      D+    +Y  +  GM                +L      +  VV     
Sbjct: 4   RSLGYLRIEATDMAAWREYGLKVLGMVE-----GKGAPEGALYLRMDDFPARLVVV---- 54

Query: 82  YGVTSYDIGTGFGHLAIATEDVYKMVENIRAKGGNVTREPGPLKGM--TTHFAFVKDPDG 139
            G     +  G+       E + ++   +  +G                       DP G
Sbjct: 55  PGEHDRLLEAGWE--CANAEGLQEIRNRLDLEGTPYKEATAAELADRRVDEMIRFADPSG 112

Query: 140 YIFELI-------QRGPTPEP---------LCQVMLRVGDLGRSIKFYEKALGMKLLRTI 183
              E+        +R  +P           +  V+L   D   ++ FY   LG +L  ++
Sbjct: 113 NCLEVFHGTALEHRRVVSPYGHRFVTGEQGMGHVVLSTRDDAEALHFYRDVLGFRLRDSM 172

Query: 184 DSPELKCALAMLGYAE-----EDQTTVLELAYSYGVTEYTKGNAYAQVAISTDDVYKSAE 238
             P         G                LA+    T  +            DDV    +
Sbjct: 173 RLPPQMVGRPADGPPAWLRFFGCNPRHHSLAFLPMPTS-SGIVHLMVEVEQADDVGLCLD 231

Query: 239 VVNLVTQELGGKITRQPGP-IPGLNTKITSFVDPDGW 274
                       ++   G  +  L         P G+
Sbjct: 232 RA----LRRKVPMSATLGRHVNDLMLSFY-MKTPGGF 263

>1kw3_B 2,3-dihydroxybiphenyl dioxygenase; four TIME repetitions of the beta-alpha-beta-BETA-beta motif oxidoreductase; 1.45A {Pseudomonas SP} SCOP: d.32.1.3 d.32.1.3 PDB: 1dhy_A 1eiq_A 1eir_A* 1eil_A 1kw6_B* 1kw8_B* 1kw9_B* 1kwb_B 1kwc_B* Length = 292

 Score = 55.8 bits (134), Expect = 3e-09
 Identities = 42/292 (14%), Positives = 75/292 (25%), Gaps = 59/292 (20%)

Query: 22  RRLLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYN 81
            RL +  + V D+     + T+  G+             +  +          V      
Sbjct: 3   ERLGYLGFAVKDVPAWDHFLTKSVGLMA-----AGSAGDAALYRADQRAWRIAVQP---- 53

Query: 82  YGVTSYDIGTGFGHLAIATEDVYKMVENIRAKGGNVTREPGPLKGM--TTHFAFVKDPDG 139
            G        G          + +M + +R  G   TR    L           ++DP G
Sbjct: 54  -GELDDLAYAGLE--VDDAAALERMADKLRQAGVAFTRGDEALMQQRKVMGLLCLQDPFG 110

Query: 140 YIFELI------------------QRGPTPEPLCQVMLRVGDLGRSIKFYEKALGMKL-- 179
              E+                         + +   +  V D  +++ FY + LG  L  
Sbjct: 111 LPLEIYYGPAEIFHEPFLPSAPVSGFVTGDQGIGHFVRCVPDTAKAMAFYTEVLGFVLSD 170

Query: 180 -LRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAISTDDVYKSAE 238
            +     PE       L            +A +       + + +   A + DDV  + +
Sbjct: 171 IIDIQMGPETSVPAHFLHC----NGRHHTIALAAFPIP-KRIHHFMLQANTIDDVGYAFD 225

Query: 239 VVNLVTQELGGKITRQPGPI---PG--LNTKITSF--VDPDGWKTVLVDNED 283
            +               G I    G   N +  SF    P     V      
Sbjct: 226 RL------------DAAGRITSLLGRHTNDQTLSFYADTPSPMIEVEFGWGP 265

>2a4x_A Mitomycin-binding protein; ALFA/beta protein, mitomycin C-binding protein, bleomycin A2, antimicrobial protein; HET: BLM; 1.40A {Streptomyces caespitosus} SCOP: d.32.1.2 PDB: 2a4w_A* 1kmz_A 1kll_A* Length = 138

 Score = 52.5 bits (126), Expect = 6e-09
 Identities = 23/131 (17%), Positives = 43/131 (32%), Gaps = 8/131 (6%)

Query: 23  RLLHAVYRVGDLDRTIKYYTECFGMELLRKRD----VPEEKYSNAFLGFGPEQSYFVVEL 78
           R+      V D+ +++++Y +  G+E+  + D              L +   +   V   
Sbjct: 4   RISLFAVVVEDMAKSLEFYRK-LGVEIPAEADSAPHTEAVLDGGIRLAWDTVE--TVRSY 60

Query: 79  TYNYGVTSYDIGTGFGHLAIATEDVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPD 138
              +   +             T  V K    +   G     +P         +A VKDPD
Sbjct: 61  DPEWQAPTGGHRFAIAFEFPDTASVDKKYAELVDAGYEGHLKPWNAVWGQR-YAIVKDPD 119

Query: 139 GYIFELIQRGP 149
           G + +L    P
Sbjct: 120 GNVVDLFAPLP 130

>3isq_A 4-hydroxyphenylpyruvate dioxygenase; tyrosine metabolism, DIS mutation, iron, mental retardation, metal-binding, oxidored phenylalanine catabolism; 1.75A {Homo sapiens} PDB: 1sqi_A* Length = 393

 Score = 53.7 bits (128), Expect = 2e-08
 Identities = 41/259 (15%), Positives = 82/259 (31%), Gaps = 46/259 (17%)

Query: 26  HAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYN---- 81
              + VG+  +   +Y    G E L  R +               +  FV+    N    
Sbjct: 14  SVTFWVGNAKQAASFYCSKMGFEPLAYRGLETGSREVVSHVIKQGKIVFVLSSALNPWNK 73

Query: 82  -YGVTSYDIGTGFGHLAIATEDVYKMVENIRAKGGNVTREPGPLK--GMTTHFAFVKDPD 138
             G      G G   +A   ED   +V+  R +G  + REP   +       FA ++   
Sbjct: 74  EMGDHLVKHGDGVKDIAFEVEDCDYIVQKARERGAKIMREPWVEQDKFGKVKFAVLQTYG 133

Query: 139 GYIFELIQRG-----------------PTPEPLCQVMLRV----------GDLGRSIKFY 171
                L+++                  P    L +  L +           ++  + ++Y
Sbjct: 134 DTTHTLVEKMNYIGQFLPGYEAPAFMDPLLPKLPKCSLEMIDHIVGNQPDQEMVSASEWY 193

Query: 172 EKALGMKLLRTIDSPELK------CALAMLGYAEEDQTTVLELAYSYGVT------EYTK 219
            K L      ++D  ++        ++ +  Y E  +  + E A     +      +Y  
Sbjct: 194 LKNLQFHRFWSVDDTQVHTEYSSLRSIVVANYEESIKMPINEPAPGKKKSQIQEYVDYNG 253

Query: 220 GNAYAQVAISTDDVYKSAE 238
           G     +A+ T+D+  +  
Sbjct: 254 GAGVQHIALKTEDIITAIR 272

>2i7r_A Conserved domain protein; structural genomics conserved domain, PSI-2, protein structure initiative; 2.20A {Streptococcus pneumoniae} SCOP: d.32.1.2 Length = 118

 Score = 50.2 bits (120), Expect = 3e-08
 Identities = 17/118 (14%), Positives = 35/118 (29%), Gaps = 14/118 (11%)

Query: 31  VGDLDRTIKYYTECFGMELLRKRDVPEE-KYSNAFLGFGPEQSYFVVELTYNYGVTSYDI 89
           V ++ +           +     D   +    +  L     Q++ V    +  G+     
Sbjct: 13  VSNVPQVCADLEHILDKKADYANDGFAQFTIGSHCLMLS--QNHLVPLENFQSGII---- 66

Query: 90  GTGFGHLAIATEDVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFELIQR 147
                 + I  EDV +  + +   G  V   P      T     V+ P G + +  + 
Sbjct: 67  ------IHIEVEDVDQNYKRLNELGIKVLHGPTVTDWGTESL-LVQGPAGLVLDFYRM 117

>2i7r_A Conserved domain protein; structural genomics conserved domain, PSI-2, protein structure initiative; 2.20A {Streptococcus pneumoniae} SCOP: d.32.1.2 Length = 118

 Score = 44.8 bits (106), Expect = 2e-06
 Identities = 23/121 (19%), Positives = 43/121 (35%), Gaps = 18/121 (14%)

Query: 154 LCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAE-EDQTTVLELAYSY 212
           L Q+ + V ++ +     E  L  K              A  G+A+    +  L L+ ++
Sbjct: 6   LNQLDIIVSNVPQVCADLEHILDKKADY-----------ANDGFAQFTIGSHCLMLSQNH 54

Query: 213 GVTEYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPD 272
            V      +    + I  +DV ++ + +     ELG K+   P       T+      P 
Sbjct: 55  LVPLENFQSG-IIIHIEVEDVDQNYKRL----NELGIKVLHGPTVTDW-GTESLLVQGPA 108

Query: 273 G 273
           G
Sbjct: 109 G 109

>2ehz_A 1,2-dihydroxynaphthalene dioxygenase; extradiol dioxygenase, protein substrate complex, oxidoreduc; 1.35A {Pseudomonas SP} PDB: 2ei0_A* 2ei1_A* 2ei3_A* 2ei2_A Length = 302

 Score = 52.3 bits (125), Expect = 5e-08
 Identities = 39/278 (14%), Positives = 76/278 (27%), Gaps = 47/278 (16%)

Query: 22  RRLLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYN 81
             L +    V D D    + T+  G+++     + E +    +L         VV     
Sbjct: 8   IELGYMGISVKDPDAWKSFATDMLGLQV-----LDEGEKDRFYLRMDYWHHRIVVH---- 58

Query: 82  YGVTSYDIGTGFGHLAIATEDVYKMVENIRAKGGNVTREPGPLKGMTTHFAFV--KDPDG 139
           +         G+        +   + + +   G  +                +  +DP G
Sbjct: 59  HNGQDDLEYLGWR--VAGKPEFEALGQKLIDAGYKIRICDKVEAQERMVLGLMKTEDPGG 116

Query: 140 YIFELI-------------------QRGPTPEPLCQVMLRVGDLGRSIKFYEKALGMKLL 180
              E+                    +     + L   ++R  D+  + KFY   LG +  
Sbjct: 117 NPTEIFWGPRIDMSNPFHPGRPLHGKFVTGDQGLGHCIVRQTDVAEAHKFYSL-LGFRGD 175

Query: 181 RTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAISTDDVYKSAEVV 240
                P      A L +   +      +A+        + N         +D+  + +  
Sbjct: 176 VEYRIPLPNGMTAELSFMHCN-ARDHSIAFGAM-PAAKRLNHLMLEYTHMEDLGYTHQQF 233

Query: 241 NLVTQELGGKITRQPG--PIPGLNTKITSF--VDPDGW 274
                +    I  Q G       N K  +F    P GW
Sbjct: 234 ----VKNEIDIALQLGIHA----NDKALTFYGATPSGW 263

>2wl9_A Catechol 2,3-dioxygenase; aromatic hydrocarbons catabolism, iron, oxidoreductase; 1.90A {Rhodococcus SP} PDB: 2wl3_A Length = 305

 Score = 51.9 bits (124), Expect = 7e-08
 Identities = 39/283 (13%), Positives = 80/283 (28%), Gaps = 57/283 (20%)

Query: 22  RRLLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYN 81
             L +    V +LD    Y     GM++     V + +    +L         V+     
Sbjct: 5   TELGYLGLSVSNLDAWRDYAAGIMGMQV-----VDDGEDDRIYLRMDRWHHRIVLH---- 55

Query: 82  YGVTSYDIGTGFGHLAIAT---EDVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVK--D 136
                 D      ++        ++ ++ E ++  G                   VK  D
Sbjct: 56  -----ADGSDDLAYIGWRVAGPVELDELAEQLKNAGIPFEVASDADAAERRVLGLVKLHD 110

Query: 137 PDGYIFELI-------------------QRGPTPEPLCQVMLRVGDLGRSIKFYEKALGM 177
           P G   E+                    +     + L  +++R  D+  + +FY      
Sbjct: 111 PGGNPTEIFYGPQVDTSSPFHPGRPMFGKFVTEGQGLGHIIIREDDVEEATRFYRLLGLE 170

Query: 178 KL--LRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAISTDDVYK 235
                +             +   +   +    LA+  G     + N         DD+  
Sbjct: 171 GAVEYKFALPNGAVGTPVFMHCNDRHHS----LAFGVG-PMDKRINHLMIEYTHLDDLGY 225

Query: 236 SAEVVNLVTQELGGKITRQPG--PIPGLNTKITSF--VDPDGW 274
           + ++V    ++    +T Q G       N +  +F   +P GW
Sbjct: 226 AHDLV----RQQKIDVTLQIGKHS----NDEALTFYCANPSGW 260

>3oaj_A Putative ring-cleaving dioxygenase MHQO; structural genomics, protein structure initiative, PSI-biolo unknown function; 1.40A {Bacillus subtilis subsp} Length = 335

 Score = 51.3 bits (122), Expect = 1e-07
 Identities = 21/179 (11%), Positives = 47/179 (26%), Gaps = 23/179 (12%)

Query: 26  HAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSN-AFLGFGPEQSYFVVELTYNYGV 84
           H    VG       +Y    G+ L+++    ++  +   + G    +   ++      G 
Sbjct: 11  HITAIVGHPQENTDFYAGVLGLRLVKQTVNFDDPGTYHLYFGNEGGKPGTIITFFPWAGA 70

Query: 85  TSYDIGTGFG---HLAIATEDVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYI 141
               IG G        +    +    + +      V        G    +    DP G  
Sbjct: 71  RQGVIGDGQVGVTSYVVPKGAMAFWEKRLEKFN--VPYTKIERFGE--QYVEFDDPHGLH 126

Query: 142 FELIQRGPTPEPLCQ---------------VMLRVGDLGRSIKFYEKALGMKLLRTIDS 185
            E+++R                          L      ++    E  +G++ +     
Sbjct: 127 LEIVEREEGEANTWTFGEVTPDVAIKGFGGATLLSEQPDKTADLLENIMGLERVGKEGD 185

>3oaj_A Putative ring-cleaving dioxygenase MHQO; structural genomics, protein structure initiative, PSI-biolo unknown function; 1.40A {Bacillus subtilis subsp} Length = 335

 Score = 48.6 bits (115), Expect = 8e-07
 Identities = 28/187 (14%), Positives = 46/187 (24%), Gaps = 36/187 (19%)

Query: 17  PKKDKRRLLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVV 76
           P    +    A       D+T        G+E + K                 +    + 
Sbjct: 147 PDVAIKGFGGATLLSEQPDKTADLLENIMGLERVGKEG------DFVRYRSAGDIGNVID 200

Query: 77  ELTYNYGVTSYDIGTGFGHLAIATED---VYKMVENIRAKGGNVTREPGPLKGMTTHFAF 133
                 G      GT   H+A    D          I + G  VT        +     F
Sbjct: 201 LKLTPIGRGQMGAGT-VHHIAWRANDDEDQLDWQRYIASHGYGVT-------PVRDRNYF 252

Query: 134 ----VKDPDGYIFELIQRGP---TPEPLCQVMLRVGDLGRSIK---FYE--KALGMKLLR 181
                ++    +FE+    P     E           +G  +     YE  +    + L 
Sbjct: 253 NAIYFREHGEILFEIATDPPGFAHDET-------QETMGEKLMLPVQYEPHRTQIEQGLL 305

Query: 182 TIDSPEL 188
             +  EL
Sbjct: 306 PFEVREL 312

>3fcd_A Lyase, ORF125EGC139; lactoylglutathione lyase, YECM, PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.92A {Uncultured bacterium} Length = 134

 Score = 46.0 bits (109), Expect = 1e-06
 Identities = 15/127 (11%), Positives = 35/127 (27%), Gaps = 17/127 (13%)

Query: 25  LHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGV 84
           +     + D+   +  + +  G EL  +        + A+L         + E       
Sbjct: 9   ITPFLHIPDMQEALTLFCDTLGFELKYRHS------NYAYLELSGCGLRLLEEPARKIIP 62

Query: 85  TSYDIGTGFGHLAIATEDVYKMVENIRAKGGNVTREPGPLKGMTTHF-----AFVKDPDG 139
                G     + I   D+  +   +     N+  +   ++ +           V+ PDG
Sbjct: 63  D----GIARVAICIDVSDIDSLHTKLSPALENLPAD--QVEPLKNMPYGQREFQVRMPDG 116

Query: 140 YIFELIQ 146
                  
Sbjct: 117 DWLNFTA 123

>3fcd_A Lyase, ORF125EGC139; lactoylglutathione lyase, YECM, PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.92A {Uncultured bacterium} Length = 134

 Score = 39.4 bits (92), Expect = 2e-04
 Identities = 20/118 (16%), Positives = 38/118 (32%), Gaps = 15/118 (12%)

Query: 158 MLRVGDLGRSIKFYEKALGMKLL-RTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTE 216
            L + D+  ++  +   LG +L  R  +   L+ +   L   EE    ++          
Sbjct: 12  FLHIPDMQEALTLFCDTLGFELKYRHSNYAYLELSGCGLRLLEEPARKIIP--------- 62

Query: 217 YTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIP-GLNTKITSFVDPDG 273
              G A   + I   D+      ++   + L          +P G   +      PDG
Sbjct: 63  --DGIARVAICIDVSDIDSLHTKLSPALENLPADQVEPLKNMPYG--QREFQVRMPDG 116

>1sqd_A 4-hydroxyphenylpyruvate dioxygenase; oxidoreductase; 1.80A {Arabidopsis thaliana} SCOP: d.32.1.3 d.32.1.3 PDB: 1tfz_A* 1tg5_A* 1sp9_A Length = 424

 Score = 48.4 bits (114), Expect = 1e-06
 Identities = 34/273 (12%), Positives = 72/273 (26%), Gaps = 60/273 (21%)

Query: 26  HAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVT 85
           H  +  GD     + ++   GM    K D+      +A          F+    Y+  ++
Sbjct: 28  HIEFWCGDATNVARRFSWGLGMRFSAKSDLSTGNMVHASYLLTSGDLRFLFTAPYSPSLS 87

Query: 86  SYDI-----------------------GTGFGHLAIATEDVYKMVENIRAKGGNVTREP- 121
           + +I                       G G   +AI  ED         A G   +  P 
Sbjct: 88  AGEIKPTTTASIPSFDHGSCRSFFSSHGLGVRAVAIEVEDAESAFSISVANGAIPSSPPI 147

Query: 122 -----------GPLKGMTTHFAFVKDPDGY--IF----------ELIQRGPTPEPLCQVM 158
                           +   +   K  D     F                     L   +
Sbjct: 148 VLNEAVTIAEVKLYGDVVLRYVSYKAEDTEKSEFLPGFERVEDASSFPLDYGIRRLDHAV 207

Query: 159 LRVGDLGRSIKFYEKALGMKLLRTIDSPELK------CALAMLGYAEEDQTTVLELAYSY 212
             V +LG ++ +     G        + ++        +  +    E     + E  +  
Sbjct: 208 GNVPELGPALTYVAGFTGFHQFAEFTADDVGTAESGLNSAVLASNDEMVLLPINEPVHGT 267

Query: 213 GVT-------EYTKGNAYAQVAISTDDVYKSAE 238
                     E+ +G     +A+ ++D++++  
Sbjct: 268 KRKSQIQTYLEHNEGAGLQHLALMSEDIFRTLR 300

>3bt3_A Glyoxalase-related enzyme, ARAC type; VOC superfamily, PSI-2, NYSGXRC, structural genomics, prote structure initiative; 2.50A {Clostridium phytofermentans} Length = 148

 Score = 46.2 bits (109), Expect = 2e-06
 Identities = 22/134 (16%), Positives = 39/134 (29%), Gaps = 14/134 (10%)

Query: 23  RLLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNY 82
           R    VY   D+D+T+K++ E  G          E       +   P +        +  
Sbjct: 21  RENGPVYFTKDMDKTVKWFEEILGWSGDIVARDDEGFGDYGCVFDYPSEVAVAHLTPFRG 80

Query: 83  GVTSYDIGTGFGHLAIATEDVYKMVENIRAKGGNVTREP-----GPLKGMTTHFAFVKDP 137
                          +  E +  + + ++  G +   +      G           +   
Sbjct: 81  FHLFKGEPIKGVAGFMMIEGIDALHKYVKENGWDQISDIYTQPWG------ARECSITTT 134

Query: 138 DGYI---FELIQRG 148
           DG I   FE IQ G
Sbjct: 135 DGCILRFFESIQEG 148

>2kjz_A ATC0852; protein of unknown function, dimer, structural genomics, PSI protein structure initiative; NMR {Agrobacterium tumefaciens} Length = 144

 Score = 45.8 bits (108), Expect = 2e-06
 Identities = 18/126 (14%), Positives = 39/126 (30%), Gaps = 15/126 (11%)

Query: 26  HAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVT 85
             +  V +   + ++Y    G++        E   + +            + L   + V 
Sbjct: 28  FTILYVDNPPASTQFYKALLGVD------PVESSPTFSLFVLANG---MKLGLWSRHTVE 78

Query: 86  -SYDIGTGFGHLAIA---TEDVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYI 141
               +  G G LA        V +     +A G  + ++P  ++   T      DPD + 
Sbjct: 79  PKASVTGGGGELAFRVENDAQVDETFAGWKASGVAMLQQPAKMEFGYT--FTAADPDSHR 136

Query: 142 FELIQR 147
             +   
Sbjct: 137 LRVYAF 142

>3rhe_A NAD-dependent benzaldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, SGX; 2.05A {Legionella pneumophila} Length = 148

 Score = 45.5 bits (107), Expect = 2e-06
 Identities = 17/133 (12%), Positives = 39/133 (29%), Gaps = 15/133 (11%)

Query: 26  HAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVT 85
             ++ V +  ++ ++Y      + +      E   + A            + L     + 
Sbjct: 9   LVLFYVKNPAKSEEFYKNLLDTQPI------ESSPTFAMFVMKTG---LRLGLWAQEEIE 59

Query: 86  -SYDIGTGFGHLAIAT---EDVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYI 141
                  G   L+      E V ++      K  ++ + P  +     +     DPD + 
Sbjct: 60  PKAHQTGGGMELSFQVNSNEMVDEIHRQWSDKEISIIQPPTQMDFG--YTFVGVDPDEHR 117

Query: 142 FELIQRGPTPEPL 154
             +     T E L
Sbjct: 118 LRIFCLKRTAENL 130

>1ecs_A Bleomycin resistance protein; arm-exchange, antibiotic inhibitor; HET: PG4; 1.70A {Klebsiella pneumoniae} SCOP: d.32.1.2 PDB: 1ewj_A* 1niq_B* 1mh6_A Length = 126

 Score = 44.5 bits (105), Expect = 3e-06
 Identities = 21/130 (16%), Positives = 35/130 (26%), Gaps = 20/130 (15%)

Query: 26  HAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVT 85
                  D D T  +Y    G  ++ +            L  G     F       +   
Sbjct: 6   TPNLPSRDFDSTAAFYER-LGFGIVFRDA------GWMILQRGDLMLEF-------FAHP 51

Query: 86  SYDIGTGFGHLAIATEDVYKMVENIRAKGGNVTREPGPLKGMTTHF------AFVKDPDG 139
             D    +    +  +D+ +     ++ G   T    P              A + DPDG
Sbjct: 52  GLDPLASWFSCCLRLDDLAEFYRQCKSVGIQETSSGYPRIHAPELQGWGGTMAALVDPDG 111

Query: 140 YIFELIQRGP 149
            +  LIQ   
Sbjct: 112 TLLRLIQNEL 121

>1xy7_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G48480, reductively methylated protein, CATH 3.10.180 fold; 1.80A {Arabidopsis thaliana} SCOP: d.32.1.9 PDB: 2q48_A Length = 166

 Score = 43.5 bits (102), Expect = 1e-05
 Identities = 19/139 (13%), Positives = 33/139 (23%), Gaps = 17/139 (12%)

Query: 26  HAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSN-------AFLGFGPEQSYFVVEL 78
             +     +   + +Y   FG         P+ K          + L             
Sbjct: 29  MLLVEAQKVGDAVTFYKSAFGAIESGHSLYPKRKLDQELPHVLSSELNLAGSSFVVCDVS 88

Query: 79  TYNYGVTSYDIGTGFGHLAIATEDVYKMVENIRAKGGNVTREPGPLKGMTTH---FAFVK 135
           +     T+   G+G     + T+D    V      G                      V 
Sbjct: 89  SLPGFSTAKSEGSGV-TFLLGTKDAEAAVAKAVDAGAVKVEVT----EAEVELGFKGKVT 143

Query: 136 DPDGYIFELIQRG--PTPE 152
           DP G  +   ++    T E
Sbjct: 144 DPFGVTWIFAEKKTVITDE 162

>3sk2_A EHPR; antibiotic resistance, griseoluteate-binding protein; HET: GRI; 1.01A {Pantoea agglomerans} PDB: 3sk1_A* Length = 132

 Score = 41.1 bits (96), Expect = 6e-05
 Identities = 17/125 (13%), Positives = 39/125 (31%), Gaps = 18/125 (14%)

Query: 26  HAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVT 85
             +  V +++R+  +Y   F  E +          +  ++ F        +   ++ G  
Sbjct: 16  LQLVYVSNVERSTDFYRFIFKKEPVFV--------TPRYVAFPSSGD--ALFAIWSGGEE 65

Query: 86  SYDIGTGFGHLAIATED------VYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDG 139
                  F  + I          ++      ++    V +EP            + DPDG
Sbjct: 66  PVAEIPRFSEIGIMLPTGEDVDKLFNEWTKQKSHQIIVIKEPYTDVFG--RTFLISDPDG 123

Query: 140 YIFEL 144
           +I  +
Sbjct: 124 HIIRV 128

>1t47_A 4-hydroxyphenylpyruvate dioxygenase; triketone inhibitor, iron, oxidoreductase; HET: NTD; 2.50A {Streptomyces avermitilis} SCOP: d.32.1.3 d.32.1.3 Length = 381

 Score = 40.6 bits (94), Expect = 3e-04
 Identities = 40/259 (15%), Positives = 73/259 (28%), Gaps = 46/259 (17%)

Query: 26  HAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVT 85
             V+ VG+  +   YY+  FGM+L+            A        + FV+         
Sbjct: 25  AVVFAVGNAKQAAHYYSTAFGMQLVAYSGPENGSRETASYVLTNGSARFVLTSVIKPATP 84

Query: 86  SYDI--------GTGFGHLAIATEDVYKMVENIRAKGGNVTREP--GPLKGMTTHFAFVK 135
                       G G   LAI   D           G     EP     +  T   A + 
Sbjct: 85  WGHFLADHVAEHGDGVVDLAIEVPDARAAHAYAIEHGARSVAEPYELKDEHGTVVLAAIA 144

Query: 136 DPDGYIFELIQRG--------------PTPEPLCQVMLRV----------GDLGRSIKFY 171
                   L+ R               P  EP      +           G +   + FY
Sbjct: 145 TYGKTRHTLVDRTGYDGPYLPGYVAAAPIVEPPAHRTFQAIDHCVGNVELGRMNEWVGFY 204

Query: 172 EKALGMKLLRTIDSPELK------CALAMLGYAEEDQTTVLELAYSYGVT------EYTK 219
            K +G   ++     ++        +  +     + +  + E A +   +      E+  
Sbjct: 205 NKVMGFTNMKEFVGDDIATEYSALMSKVVADGTLKVKFPINEPALAKKKSQIDEYLEFYG 264

Query: 220 GNAYAQVAISTDDVYKSAE 238
           G     +A++T D+ ++  
Sbjct: 265 GAGVQHIALNTGDIVETVR 283

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 40.6 bits (94), Expect = 5e-04
 Identities = 43/277 (15%), Positives = 77/277 (27%), Gaps = 101/277 (36%)

Query: 14  LEWPKKDKRRLLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSY 73
           +   + + RRLL +           K Y  C    LL   +V   K  NAF         
Sbjct: 227 IHSIQAELRRLLKS-----------KPYENC----LLVLLNVQNAKAWNAFNL----SCK 267

Query: 74  FVVELTYNYGVTSYDIGTGFGHLAIATEDVYKMVENIRAKGGNVTREPGPLKGMTTHFA- 132
            ++  T    VT +        L+ AT     +  +                 +T     
Sbjct: 268 ILL-TTRFKQVTDF--------LSAATTTHISLDHH--------------SMTLTPDEVK 304

Query: 133 --FVKDPDGYIFELIQRGPTPEPLCQVM-LRVGDLGRSIK-------FYEKALGMKLLRT 182
              +K  D    +L      P  +      R+  +  SI+        ++     KL   
Sbjct: 305 SLLLKYLDCRPQDL------PREVLTTNPRRLSIIAESIRDGLATWDNWKHVNCDKLTTI 358

Query: 183 IDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAISTDDV--------- 233
           I+S     +L +L  AE  +                    + ++++              
Sbjct: 359 IES-----SLNVLEPAEYRK-------------------MFDRLSVFPPSAHIPTILLSL 394

Query: 234 ---YKSAEVVNLVTQELGGK--ITRQPGP----IPGL 261
                    V +V  +L     + +QP      IP +
Sbjct: 395 IWFDVIKSDVMVVVNKLHKYSLVEKQPKESTISIPSI 431

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	291
3zi1_A	330	Glyoxalase domain-containing protein 4; isomerase;	100.0
3lm4_A	339	Catechol 2,3-dioxygenase; NYSGXRC, PSI-II, protein	100.0
1f1u_A	323	Homoprotocatechuate 2,3-dioxygenase; extradiol, ma	100.0
3hpy_A	309	Catechol 2,3-dioxygenase; repeated motifs, aromati	100.0
4ghg_A	365	Homoprotocatechuate 2,3-dioxygenase; oxygen activa	100.0
3oaj_A	335	Putative ring-cleaving dioxygenase MHQO; structura	100.0
3b59_A	310	Glyoxalase/bleomycin resistance protein/dioxygena;	100.0
1mpy_A	307	Catechol 2,3-dioxygenase; extradiol dioxygenase, n	100.0
2zyq_A	300	Probable biphenyl-2,3-DIOL 1,2-dioxygenase BPHC; e	100.0
1zsw_A	338	Metallo protein, glyoxalase family protein; hypoth	100.0
3oxh_A	282	RV0577 protein; kinase regulation, antibiotic resi	100.0
2wl9_A	305	Catechol 2,3-dioxygenase; aromatic hydrocarbons ca	100.0
1kw3_B	292	2,3-dihydroxybiphenyl dioxygenase; four TIME repet	100.0
1lgt_A	297	Biphenyl-2,3-DIOL 1,2-dioxygenase; extradiol dioxy	100.0
2ehz_A	302	1,2-dihydroxynaphthalene dioxygenase; extradiol di	100.0
2r5v_A	357	PCZA361.1; dioxygenase, non-heme iron, vancomycin,	99.97
1t47_A	381	4-hydroxyphenylpyruvate dioxygenase; triketone inh	99.96
1sqd_A	424	4-hydroxyphenylpyruvate dioxygenase; oxidoreductas	99.95
3isq_A	393	4-hydroxyphenylpyruvate dioxygenase; tyrosine meta	99.94
1cjx_A	357	4-hydroxyphenylpyruvate dioxygenase; oxidoreductas	99.93
1sp8_A	418	4-hydroxyphenylpyruvate dioxygenase; oxidoreductas	99.93
1f9z_A	135	Glyoxalase I; beta-alpha-beta-BETA-beta motif, pro	99.87
4g6x_A	155	Glyoxalase/bleomycin resistance protein/dioxygena;	99.85
1f9z_A	135	Glyoxalase I; beta-alpha-beta-BETA-beta motif, pro	99.85
2c21_A	144	Trypanothione-dependent glyoxalase I; lyase, gluta	99.84
3l7t_A	134	SMU.1112C, putative uncharacterized protein; metal	99.84
4hc5_A	133	Glyoxalase/bleomycin resistance protein/dioxygena;	99.83
3pkv_A	252	Toxoflavin lyase (TFLA); metalloenzyme, vicinal ox	99.83
4g6x_A	155	Glyoxalase/bleomycin resistance protein/dioxygena;	99.82
2p25_A	126	Glyoxalase family protein; structural genomics, MC	99.82
3e5d_A	127	Putative glyoxalase I; structural genomics, joint	99.82
3rmu_A	134	Methylmalonyl-COA epimerase, mitochondrial; struct	99.81
3vw9_A	187	Lactoylglutathione lyase; glyoxalase, lyase-lyase	99.81
3hdp_A	133	Glyoxalase-I; glutathione,lyase, methylglyoxal,110	99.8
2rk0_A	136	Glyoxalase/bleomycin resistance protein/dioxygena;	99.8
3vw9_A	187	Lactoylglutathione lyase; glyoxalase, lyase-lyase	99.8
3rmu_A	134	Methylmalonyl-COA epimerase, mitochondrial; struct	99.79
2za0_A	184	Glyoxalase I; lyase, lactoylglutathione lyase, met	99.79
3oa4_A	161	Glyoxalase, BH1468 protein; structural genomics, p	99.79
3uh9_A	145	Metallothiol transferase FOSB 2; structural genomi	99.79
2c21_A	144	Trypanothione-dependent glyoxalase I; lyase, gluta	99.79
3e5d_A	127	Putative glyoxalase I; structural genomics, joint	99.79
1jc4_A	148	Methylmalonyl-COA epimerase; vicinal oxygen chelat	99.79
3hdp_A	133	Glyoxalase-I; glutathione,lyase, methylglyoxal,110	99.78
3l7t_A	134	SMU.1112C, putative uncharacterized protein; metal	99.78
1ss4_A	153	Glyoxalase family protein; structural genomics, PS	99.78
3huh_A	152	Virulence protein STM3117; structural genomics, ny	99.78
3ey7_A	133	Biphenyl-2,3-DIOL 1,2-dioxygenase III-related prot	99.78
3ghj_A	141	Putative integron gene cassette protein; integron	99.77
4hc5_A	133	Glyoxalase/bleomycin resistance protein/dioxygena;	99.77
3oa4_A	161	Glyoxalase, BH1468 protein; structural genomics, p	99.76
3kol_A	156	Oxidoreductase, glyoxalase/bleomycin resistance pr	99.76
3gm5_A	159	Lactoylglutathione lyase and related lyases; sheet	99.76
2za0_A	184	Glyoxalase I; lyase, lactoylglutathione lyase, met	99.75
2i7r_A	118	Conserved domain protein; structural genomics cons	99.75
2rk0_A	136	Glyoxalase/bleomycin resistance protein/dioxygena;	99.75
2p25_A	126	Glyoxalase family protein; structural genomics, MC	99.75
1r9c_A	139	Glutathione transferase; fosfomycin resistance pro	99.75
3uh9_A	145	Metallothiol transferase FOSB 2; structural genomi	99.75
2qqz_A	126	Glyoxalase family protein, putative; alpha-beta st	99.74
3gm5_A	159	Lactoylglutathione lyase and related lyases; sheet	99.74
2p7o_A	133	Glyoxalase family protein; fosfomycin resistance p	99.74
1twu_A	139	Hypothetical protein YYCE; structural genomics, pr	99.74
3sk2_A	132	EHPR; antibiotic resistance, griseoluteate-binding	99.73
1jc4_A	148	Methylmalonyl-COA epimerase; vicinal oxygen chelat	99.73
3rhe_A	148	NAD-dependent benzaldehyde dehydrogenase; structur	99.73
2pjs_A	119	AGR_C_3564P, uncharacterized protein ATU1953; glyo	99.73
1ss4_A	153	Glyoxalase family protein; structural genomics, PS	99.73
3bqx_A	150	Glyoxalase-related enzyme; VOC superfamily, PSI-2,	99.73
2kjz_A	144	ATC0852; protein of unknown function, dimer, struc	99.73
3g12_A	128	Putative lactoylglutathione lyase; glyoxalase, ble	99.73
3r6a_A	144	Uncharacterized protein; PSI biology, structural g	99.73
3ey7_A	133	Biphenyl-2,3-DIOL 1,2-dioxygenase III-related prot	99.73
3kol_A	156	Oxidoreductase, glyoxalase/bleomycin resistance pr	99.72
3zw5_A	147	Glyoxalase domain-containing protein 5; lyase; 1.6	99.72
3g12_A	128	Putative lactoylglutathione lyase; glyoxalase, ble	99.72
1nki_A	135	Probable fosfomycin resistance protein; potassium	99.72
3itw_A	137	Protein TIOX; bleomycin resistance fold, bisinterc	99.72
1npb_A	141	Fosfomycin-resistance protein; manganese binding,	99.71
2r6u_A	148	Uncharacterized protein; structural genomics, PSI-	99.71
3sk2_A	132	EHPR; antibiotic resistance, griseoluteate-binding	99.71
3rhe_A	148	NAD-dependent benzaldehyde dehydrogenase; structur	99.71
3ghj_A	141	Putative integron gene cassette protein; integron	99.71
3itw_A	137	Protein TIOX; bleomycin resistance fold, bisinterc	99.71
3e0r_A	244	C3-degrading proteinase (CPPA protein); MCSG, PSI,	99.71
2a4x_A	138	Mitomycin-binding protein; ALFA/beta protein, mito	99.71
3r6a_A	144	Uncharacterized protein; PSI biology, structural g	99.7
2qqz_A	126	Glyoxalase family protein, putative; alpha-beta st	99.7
3huh_A	152	Virulence protein STM3117; structural genomics, ny	99.7
3r4q_A	160	Lactoylglutathione lyase; structural genomics, PSI	99.7
1twu_A	139	Hypothetical protein YYCE; structural genomics, pr	99.7
3rri_A	135	Glyoxalase/bleomycin resistance protein/dioxygena;	99.7
1xrk_A	124	Bleomycin resistance protein; arm exchange, ligand	99.7
2i7r_A	118	Conserved domain protein; structural genomics cons	99.7
3m2o_A	164	Glyoxalase/bleomycin resistance protein; unknown f	99.69
2p7o_A	133	Glyoxalase family protein; fosfomycin resistance p	99.69
3ct8_A	146	Protein BH2160, putative glyoxalase; NP_243026.1,	99.69
2kjz_A	144	ATC0852; protein of unknown function, dimer, struc	99.69
1xqa_A	113	Glyoxalase/bleomycin resistance protein; dioxygena	99.68
3r4q_A	160	Lactoylglutathione lyase; structural genomics, PSI	99.68
1xrk_A	124	Bleomycin resistance protein; arm exchange, ligand	99.68
1r9c_A	139	Glutathione transferase; fosfomycin resistance pro	99.68
2pjs_A	119	AGR_C_3564P, uncharacterized protein ATU1953; glyo	99.68
3ct8_A	146	Protein BH2160, putative glyoxalase; NP_243026.1,	99.68
2a4x_A	138	Mitomycin-binding protein; ALFA/beta protein, mito	99.67
2rbb_A	141	Glyoxalase/bleomycin resistance protein/dioxygena;	99.67
3fcd_A	134	Lyase, ORF125EGC139; lactoylglutathione lyase, YEC	99.67
3bqx_A	150	Glyoxalase-related enzyme; VOC superfamily, PSI-2,	99.67
3fcd_A	134	Lyase, ORF125EGC139; lactoylglutathione lyase, YEC	99.66
2r6u_A	148	Uncharacterized protein; structural genomics, PSI-	99.66
2qnt_A	141	AGR_C_3434P, uncharacterized protein ATU1872; glyo	99.66
1qto_A	122	Bleomycin-binding protein; arm-exchange, antibioti	99.66
1ecs_A	126	Bleomycin resistance protein; arm-exchange, antibi	99.66
1qto_A	122	Bleomycin-binding protein; arm-exchange, antibioti	99.66
1nki_A	135	Probable fosfomycin resistance protein; potassium	99.66
3rri_A	135	Glyoxalase/bleomycin resistance protein/dioxygena;	99.65
1ecs_A	126	Bleomycin resistance protein; arm-exchange, antibi	99.65
1xqa_A	113	Glyoxalase/bleomycin resistance protein; dioxygena	99.65
3zi1_A	330	Glyoxalase domain-containing protein 4; isomerase;	99.65
1npb_A	141	Fosfomycin-resistance protein; manganese binding,	99.65
4gym_A	149	Glyoxalase/bleomycin resistance protein/dioxygena;	99.65
2rbb_A	141	Glyoxalase/bleomycin resistance protein/dioxygena;	99.64
3lm4_A	339	Catechol 2,3-dioxygenase; NYSGXRC, PSI-II, protein	99.64
3m2o_A	164	Glyoxalase/bleomycin resistance protein; unknown f	99.64
4gym_A	149	Glyoxalase/bleomycin resistance protein/dioxygena;	99.63
3hpy_A	309	Catechol 2,3-dioxygenase; repeated motifs, aromati	99.63
3zw5_A	147	Glyoxalase domain-containing protein 5; lyase; 1.6	99.63
1mpy_A	307	Catechol 2,3-dioxygenase; extradiol dioxygenase, n	99.62
2qnt_A	141	AGR_C_3434P, uncharacterized protein ATU1872; glyo	99.61
2rk9_A	145	Glyoxalase/bleomycin resistance protein/dioxygena;	99.61
3bt3_A	148	Glyoxalase-related enzyme, ARAC type; VOC superfam	99.61
1f1u_A	323	Homoprotocatechuate 2,3-dioxygenase; extradiol, ma	99.61
2rk9_A	145	Glyoxalase/bleomycin resistance protein/dioxygena;	99.6
2zyq_A	300	Probable biphenyl-2,3-DIOL 1,2-dioxygenase BPHC; e	99.59
3b59_A	310	Glyoxalase/bleomycin resistance protein/dioxygena;	99.58
3oaj_A	335	Putative ring-cleaving dioxygenase MHQO; structura	99.58
1kw3_B	292	2,3-dihydroxybiphenyl dioxygenase; four TIME repet	99.57
3oxh_A	282	RV0577 protein; kinase regulation, antibiotic resi	99.56
3bt3_A	148	Glyoxalase-related enzyme, ARAC type; VOC superfam	99.55
2wl9_A	305	Catechol 2,3-dioxygenase; aromatic hydrocarbons ca	99.55
1lgt_A	297	Biphenyl-2,3-DIOL 1,2-dioxygenase; extradiol dioxy	99.54
1zsw_A	338	Metallo protein, glyoxalase family protein; hypoth	99.53
2ehz_A	302	1,2-dihydroxynaphthalene dioxygenase; extradiol di	99.52
1xy7_A	166	Unknown protein; structural genomics, protein stru	99.52
4ghg_A	365	Homoprotocatechuate 2,3-dioxygenase; oxygen activa	99.5
2r5v_A	357	PCZA361.1; dioxygenase, non-heme iron, vancomycin,	99.5
2zw5_A	301	Bleomycin acetyltransferase; dimer, two domains; H	99.49
1xy7_A	166	Unknown protein; structural genomics, protein stru	99.47
1u6l_A	149	Hypothetical protein; structural genomics, PSI, pr	99.47
3pkv_A	252	Toxoflavin lyase (TFLA); metalloenzyme, vicinal ox	99.46
1u6l_A	149	Hypothetical protein; structural genomics, PSI, pr	99.43
1u7i_A	136	Hypothetical protein; structural genomics, PA1358,	99.42
1u7i_A	136	Hypothetical protein; structural genomics, PA1358,	99.4
2zw5_A	301	Bleomycin acetyltransferase; dimer, two domains; H	99.39
1tsj_A	139	Conserved hypothetical protein; structural genomic	99.31
1t47_A	381	4-hydroxyphenylpyruvate dioxygenase; triketone inh	99.31
1sqd_A	424	4-hydroxyphenylpyruvate dioxygenase; oxidoreductas	99.24
1cjx_A	357	4-hydroxyphenylpyruvate dioxygenase; oxidoreductas	99.24
3oms_A	138	PHNB protein; structural genomics, PSI-2, protein	99.19
1tsj_A	139	Conserved hypothetical protein; structural genomic	99.19
3l20_A	172	Putative uncharacterized protein; hypothetical pro	99.17
3isq_A	393	4-hydroxyphenylpyruvate dioxygenase; tyrosine meta	99.12
1sp8_A	418	4-hydroxyphenylpyruvate dioxygenase; oxidoreductas	99.12
3l20_A	172	Putative uncharacterized protein; hypothetical pro	99.11
3oms_A	138	PHNB protein; structural genomics, PSI-2, protein	99.1
3e0r_A	244	C3-degrading proteinase (CPPA protein); MCSG, PSI,	98.86
3p8a_A	274	Uncharacterized protein; mainly antiparallel beta	98.68
1u69_A	163	Hypothetical protein; structural genomics, MSCG, p	98.31
1u69_A	163	Hypothetical protein; structural genomics, MSCG, p	98.08
3opy_B	941	6-phosphofructo-1-kinase beta-subunit; ATP binding	97.56
3opy_B	941	6-phosphofructo-1-kinase beta-subunit; ATP binding	97.25
3p8a_A	274	Uncharacterized protein; mainly antiparallel beta	94.48
3opy_A	989	6-phosphofructo-1-kinase alpha-subunit; ATP bindin	87.57
3ghx_A	179	Adenylate cyclase CYAB; CYTH domain, antiparallel	80.19

>3zi1_A Glyoxalase domain-containing protein 4; isomerase; 1.90A {Homo sapiens}

Probab=100.00  E-value=9.7e-36  Score=256.91  Aligned_cols=248  Identities=31%  Similarity=0.570  Sum_probs=192.7

Q ss_pred             CCcCCccceeeEEEEeCCHHHHHHHHHHhcCCEEEEEeccC-----------CCceeeEEeeccCCCcceEEEeeecCCC
Q 022831           16 WPKKDKRRLLHAVYRVGDLDRTIKYYTECFGMELLRKRDVP-----------EEKYSNAFLGFGPEQSYFVVELTYNYGV   84 (291)
Q Consensus        16 ~~~~~~~~i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~l~l~~~~~~   84 (291)
                      +..|++++|.|++|.|+|++++++||+++|||++..+...+           ++.+..+++.+++......+++....+.
T Consensus        20 ~~~M~~~~i~Hv~l~V~Dle~s~~FY~~vLGl~~~~~~~~~~~~~a~~~g~~~~~~~~~~l~~~~~~~~~~leL~~~~~~   99 (330)
T 3zi1_A           20 FQSMAARRALHFVFKVGNRFQTARFYRDVLGMKVLRHEEFEEGCKAACNGPYDGKWSKTMVGFGPEDDHFVAELTYNYGV   99 (330)
T ss_dssp             GGGCSCCEEEEEEEECSCHHHHHHHHHHTSCCEEEEEEEEC---------CCCSCEEEEEEESSCTTTCCEEEEEEETTC
T ss_pred             eeecccceeeEEEEEeCCHHHHHHHHHHhcCCeEEEEeecchhhhhhccCCcCCceEEEEEecCCCCCccEEEEeccCCC
Confidence            44567789999999999999999999999999998776654           4456677777766556677888776555


Q ss_pred             CcccCCCCceEEEEEECCHHHHHHHHHHcCCeeeeCCccCCCCceEEEEEECCCCcEEEEEecCC-CCCCceeeeeeeCC
Q 022831           85 TSYDIGTGFGHLAIATEDVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFELIQRGP-TPEPLCQVMLRVGD  163 (291)
Q Consensus        85 ~~~~~g~~~~~i~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dP~G~~iel~~~~~-~~~~~~hv~l~v~D  163 (291)
                      ..+..+.++.||+|.|+|+   .++++++|+++...+    .  + .+|++||||+.|||++... .+.++.|+.|.|+|
T Consensus       100 ~~~~~~~g~~hiaf~V~d~---~~~l~~~G~~~~~~~----~--~-~~~~~DPdG~~iel~~~~~~~~~~i~hv~L~v~D  169 (330)
T 3zi1_A          100 GDYKLGNDFMGITLASSQA---VSNARKLEWPLTEVA----E--G-VFETEAPGGYKFYLQNRSLPQSDPVLKVTLAVSD  169 (330)
T ss_dssp             CCCCBCSSEEEEEEECHHH---HHHHHHHTCCCEEEE----T--T-EEEEECTTSCEEEEESSCCTTSCSEEEEEEEESC
T ss_pred             CccccCCCeeEEEEECchH---HHHHHHcCCceeccC----C--c-eEEEECCCCCEEEEEecCCCCCCceeEEEEECCC
Confidence            5556677999999999997   678889999987554    2  2 4889999999999999863 56789999999999


Q ss_pred             chhhHHHHHHhcCCeeeeeccCcccceeeeeeccCCCCcceEEEEeEecCceeeccCceeeEEEEEec--ChHHHHHHHH
Q 022831          164 LGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAISTD--DVYKSAEVVN  241 (291)
Q Consensus       164 ~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~~hia~~v~--di~~~~~~l~  241 (291)
                      ++++.+||+++|||++.......+    ..++..++.  ...+++.....  +...+.++.|++|.|+  |++++++++ 
T Consensus       170 l~~a~~FY~~vLG~~~~~~~~~~~----~~~l~~g~~--~~~l~l~~~~~--~~~~~~~~~hiaf~v~~~dld~~~~rl-  240 (330)
T 3zi1_A          170 LQKSLNYWCNLLGMKIYENDEEKQ----RALLGYADN--QCKLELQGVKG--GVDHAAAFGRIAFSCPQKELPDLEDLM-  240 (330)
T ss_dssp             HHHHHHHHHHTTCCEEEEEETTTT----EEEEESSTT--SCEEEEEECSS--CCCCBTTCCEEEEEECGGGHHHHHHHH-
T ss_pred             HHHHHHHHHHhcCCEEEeeccCCc----EEEEEeCCc--eEEEEECCCCC--CCCCCCCCceEEEEEEcccHHHHHHHH-
Confidence            999999999999999887654322    234444332  45566654332  1223457789999995  789999999 


Q ss_pred             HHHHhhCCeeeeccccc--CC-CCceEEEEECCCCCeEEEEechhhh
Q 022831          242 LVTQELGGKITRQPGPI--PG-LNTKITSFVDPDGWKTVLVDNEDFL  285 (291)
Q Consensus       242 ~~~~~~G~~~~~~p~~~--~~-~~~~~~~~~DPdG~~iel~~~~~~~  285 (291)
                         +++|+++..+|...  ++ .+.+.+||+|||||.|||+++....
T Consensus       241 ---~~~G~~i~~~~~~~~~pg~~g~~~~~f~DPdG~~iEl~~~~~~~  284 (330)
T 3zi1_A          241 ---KRENQKILTPLVSLDTPGKATVQVVILADPDGHEICFVGDEAFR  284 (330)
T ss_dssp             ---HHTTCEEEEEEEEECCTTSCCEEEEEEECTTCCEEEEEEHHHHH
T ss_pred             ---HHcCCcEecCceecccCCCCceEEEEEECCCCCEEEEEEecccc
Confidence               99999988877652  21 2358899999999999999987765

>3lm4_A Catechol 2,3-dioxygenase; NYSGXRC, PSI-II, protein structure initiative, 2hydroxyl 6 OXO 6 phenyl hexa 2-4 dienoic acid, peroxide; HET: HPX; 1.80A {Rhodococcus jostii}

Probab=100.00  E-value=1.7e-34  Score=250.26  Aligned_cols=242  Identities=14%  Similarity=0.154  Sum_probs=181.3

Q ss_pred             cCCccceeeEEEEeCCHHHHHHHHHHhcCCEEEEEeccCCCceeeEEeeccCCCcceEEEeeecCCCCcccCCCCceEEE
Q 022831           18 KKDKRRLLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHLA   97 (291)
Q Consensus        18 ~~~~~~i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~g~~~~~i~   97 (291)
                      .+.+++|+||.|.|+|++++++||+++|||++..+..   +   ..++..........+.+....       ..++.|++
T Consensus         6 ~~~i~~l~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~---~---~~~l~~~~~~~~~~l~l~~~~-------~~g~~~~a   72 (339)
T 3lm4_A            6 RFDIAHLARAELFSPKPQETLDFFTKFLGMYVTHREG---Q---SVYLRGYEDPYPWSLKITEAP-------EAGMGHAA   72 (339)
T ss_dssp             GGSEEEEEEEEEEESSHHHHHHHHHHTTCCEEEEEET---T---EEEEECTTCSSSCSEEEEECS-------SCEEEEEE
T ss_pred             CCCCcEEEEEEEEeCCHHHHHHHHHhcCCCEEEEecC---C---EEEEEecCCCCceEEEEeeCC-------CCCcceEE
Confidence            4678999999999999999999999999999987632   1   344543222222233333321       33688999


Q ss_pred             EEECC---HHHHHHHHHHcCCeeeeCCccCCCCceEEEEEECCCCcEEEEEecCC------------------------C
Q 022831           98 IATED---VYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFELIQRGP------------------------T  150 (291)
Q Consensus        98 ~~v~d---~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dP~G~~iel~~~~~------------------------~  150 (291)
                      |.|+|   +++++++|+++|+++...+. ..++.+ .++|+||+|+.|||+....                        .
T Consensus        73 f~v~~~~dld~~~~~l~~~G~~~~~~~~-~~~~~~-~~~f~DPdG~~iel~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~  150 (339)
T 3lm4_A           73 MRTSSPEALERRAKSLTDGNVDGTWSED-QFGYGK-TFEYQSPDGHNLQLLWEAEKYVAPPELRSKILTRPSKKPLQGIP  150 (339)
T ss_dssp             EEESSHHHHHHHHHHHHHTTCCEEEECC-STTBCC-EEEEECTTCCEEEEECCBCCCCCCGGGCCSSTTCSSCCCSBSSC
T ss_pred             EEeCCHHHHHHHHHHHHHCCCceeeccC-CCCceE-EEEEECCCCCEEEEEEeeeEcCCCccccccccCcccccCCCCCC
Confidence            99997   89999999999999876655 233333 4889999999999986521                        2


Q ss_pred             CCCceeeeeeeCCchhhHHHHHHhcCCeeeeeccCcccceeeeeeccCCCCcceEEEEeEecCceeeccCceeeEEEEEe
Q 022831          151 PEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAIST  230 (291)
Q Consensus       151 ~~~~~hv~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~~hia~~v  230 (291)
                      +.+++|+.|.|+|++++.+||+++|||++..... .++.....|+..+..  ...+.+.....    ...++++|++|.|
T Consensus       151 ~~~l~Hv~l~v~D~~~a~~FY~~vLG~~~~~~~~-~~g~~~~~~l~~~~~--~~~l~~~~~~~----~~~~~~~Hiaf~v  223 (339)
T 3lm4_A          151 VKRIDHLNLMSSDVTAVKDSFERHLGFRTTERVV-DGNVEIGAWMSSNLL--GHEVACMRDMT----GGHGKLHHLAFFY  223 (339)
T ss_dssp             CCEEEEEEEEESCHHHHHHHHHHHHCCEEEEEEE-ETTEEEEEEEESSSS--SCSEEEEECTT----SCCSEEEEEEEEC
T ss_pred             cceeeeEEEEcCCHHHHHHHHHHhCCCeEEEEEe-cCCcEEEEEEEeCCC--ceEEEEeccCC----CCCCceeEEEEEe
Confidence            3459999999999999999999999999887754 333334556654432  34455554211    1245799999999


Q ss_pred             cC---hHHHHHHHHHHHHhhCCeeeecccccCCCCceEEEEECCCCCeEEEEechhhh
Q 022831          231 DD---VYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNEDFL  285 (291)
Q Consensus       231 ~d---i~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~~~~  285 (291)
                      +|   ++++++++    +++|+++..+|+++..++.+++||+|||||+|||++..++.
T Consensus       224 ~d~~~v~~~~~~l----~~~G~~i~~~p~~~~~~~~~~~y~~DPdG~~iEl~~~~~~~  277 (339)
T 3lm4_A          224 GTGQHNIDAVEMF----RDYDIQIEAGPDKHGITQSQFLYVFEPGGNRIELFGEAGYL  277 (339)
T ss_dssp             CCHHHHHHHHHHH----HHTTCEEEEEEEEETGGGEEEEEEECTTSCEEEEECCCCCC
T ss_pred             CCHHHHHHHHHHH----HHCCCeEEeCCcccccCCceEEEEEcCCCCEEEEEEcCCee
Confidence            99   77777788    99999999999887765668899999999999999766554

>1f1u_A Homoprotocatechuate 2,3-dioxygenase; extradiol, manganese, biodegradation, aromatic, oxidoreductase; 1.50A {Arthrobacter globiformis} SCOP: d.32.1.3 d.32.1.3 PDB: 1f1r_A 1f1v_A* 1f1x_A

Probab=100.00  E-value=7.1e-34  Score=244.91  Aligned_cols=239  Identities=18%  Similarity=0.211  Sum_probs=179.5

Q ss_pred             CcCCccceeeEEEEeCCHHHHHHHHHHhcCCEEEEEeccCCCceeeEEeeccCCCcceEEEeeecCCCCcccCCCCceEE
Q 022831           17 PKKDKRRLLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHL   96 (291)
Q Consensus        17 ~~~~~~~i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~g~~~~~i   96 (291)
                      +.+++++|.|+.|.|+|++++++||+++|||++..+..   +   ..++..........+.+...       ...+..|+
T Consensus        11 ~~~~i~~l~hv~l~v~Dl~~a~~FY~~vlG~~~~~~~~---~---~~~l~~~~~~~~~~l~l~~~-------~~~~~~~~   77 (323)
T 1f1u_A           11 PAPDIVRCAYMEIVVTDLAKSREFYVDVLGLHVTEEDE---N---TIYLRSLEEFIHHNLVLRQG-------PIAAVAAF   77 (323)
T ss_dssp             CCCCEEEEEEEEEEESCHHHHHHHHTTTTCCEEEEECS---S---EEEEECTTCCSSCSEEEEEC-------SSCEEEEE
T ss_pred             CCcccceeeEEEEEeCCHHHHHHHHHhCCCCEEeeecC---C---EEEEEecCCCCcEEEEEEEC-------CCCCeeEE
Confidence            44789999999999999999999999999999976531   1   44555322221233444332       12367899


Q ss_pred             EEEE---CCHHHHHHHHHHcCCeeeeCCc-cCCCCceEEEEEECCCCcEEEEEecCCC---------------CCCceee
Q 022831           97 AIAT---EDVYKMVENIRAKGGNVTREPG-PLKGMTTHFAFVKDPDGYIFELIQRGPT---------------PEPLCQV  157 (291)
Q Consensus        97 ~~~v---~d~~~~~~~l~~~G~~~~~~~~-~~~~g~~~~~~~~dP~G~~iel~~~~~~---------------~~~~~hv  157 (291)
                      +|.|   +|+++++++|+++|+++...+. ..+++.+ .++|+||+|+.|||++....               +.+|+|+
T Consensus        78 ~f~v~~~~dl~~~~~~l~~~G~~~~~~~~~~~~~~g~-~~~~~DP~G~~iel~~~~~~~~~~~~~~~~~~~~~~~~l~Hv  156 (323)
T 1f1u_A           78 AYRVKSPAEVDAAEAYYKELGCRTERRKEGFTKGIGD-SVRVEDPLGFPYEFFYETEHVERLTQRYDLYSAGELVRLDHF  156 (323)
T ss_dssp             EEEESSHHHHHHHHHHHHHTTCCEEEETTCSSTTBCS-EEEEECTTSCEEEEECCBCCCCCCTTCGGGCCTTCCCEEEEE
T ss_pred             EEEeCCHHHHHHHHHHHHhCCCcEEeccccccCCcce-EEEEECCCCCEEEEEEecccccccccccccCCCCCCceeeeE
Confidence            9999   7899999999999999877665 3334334 47899999999999876421               2458999


Q ss_pred             eeeeCCchhhHHHHHHhcCCeeeeeccCcccceeeeeeccCCCCcceEEEEeEecCceeeccCceeeEEEEEecChHH--
Q 022831          158 MLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAISTDDVYK--  235 (291)
Q Consensus       158 ~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~~hia~~v~di~~--  235 (291)
                      .|.|+|++++.+|| ++|||++......+++.....|+..+..  +..+.+...       .+++++|++|.|+|+++  
T Consensus       157 ~l~v~D~~~a~~FY-~~LGf~~~~~~~~~~g~~~~~f~~~~~~--~~~~~~~~~-------~~~~~~Hiaf~v~d~d~v~  226 (323)
T 1f1u_A          157 NQVTPDVPRGRAYL-EDLGFRVSEDIKDSDGVTYAAWMHRKQT--VHDTALTGG-------NGPRMHHVAFATHEKHNII  226 (323)
T ss_dssp             EEEESCHHHHHHHH-HHTTCEEEEEEECTTCCEEEEEEESSSS--SCSEEEEES-------SBSEEEEEEEECSSHHHHH
T ss_pred             EEecCCHHHHHHHH-HhCCCeEEEEEEcCCCcEEEEEEEcCCC--cccEEEeCC-------CCCCceEEEEECCCHHHHH
Confidence            99999999999999 9999998876544333334455554332  234554421       13489999999999998  


Q ss_pred             -HHHHHHHHHHhhCC--eeeecccccCCCCceEEEEECCCCCeEEEEechh
Q 022831          236 -SAEVVNLVTQELGG--KITRQPGPIPGLNTKITSFVDPDGWKTVLVDNED  283 (291)
Q Consensus       236 -~~~~l~~~~~~~G~--~~~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~~  283 (291)
                       +++++    +++|+  ++..+|+++..++.+++|++|||||+||++....
T Consensus       227 ~~~~~l----~~~G~~~~i~~~p~~~~~~~~~~~y~~DPdG~~iE~~~~~~  273 (323)
T 1f1u_A          227 QICDKM----GALRISDRIERGPGRHGVSNAFYLYILDPDGHRIEIYTQDY  273 (323)
T ss_dssp             HHHHHH----HHTTCGGGEEEEEEECSTTCCEEEEEECTTCCEEEEEECCC
T ss_pred             HHHHHH----HHCCCccccccCCCccCCCCcEEEEEECCCCCEEEEEeCCE
Confidence             77788    99999  9988888877666788999999999999987543

>3hpy_A Catechol 2,3-dioxygenase; repeated motifs, aromatic hydrocarbons catabolism, iron, oxidoreductase; 1.94A {Pseudomonas SP} PDB: 3hpv_A 3hq0_A*

Probab=100.00  E-value=1.2e-33  Score=242.08  Aligned_cols=241  Identities=15%  Similarity=0.153  Sum_probs=175.7

Q ss_pred             CCccceeeEEEEeCCHHHHHHHHHHhcCCEEEEEeccCCCceeeEEeec-cCCCcceEEEeeecCCCCcccCCCCceEEE
Q 022831           19 KDKRRLLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGF-GPEQSYFVVELTYNYGVTSYDIGTGFGHLA   97 (291)
Q Consensus        19 ~~~~~i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~l~~~~~~~~~~~g~~~~~i~   97 (291)
                      |.+++|+||.|.|+|++++++||+++|||++..+..  .+   ..++.. +.. ....+.+....       ..+..|++
T Consensus         4 ~~i~~i~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~--~~---~~~l~~~~~~-~~~~l~l~~~~-------~~~~~h~a   70 (309)
T 3hpy_A            4 TGVLRPGHAQVRVLNLEEGIHFYRNVLGLVETGRDD--QG---RVYFKCWDER-DHSCYIIREAD-------TAGIDFFG   70 (309)
T ss_dssp             CSEEEEEEEEEEESSHHHHHHHHHHTSCCEEEEECT--TS---CEEEECTTCC-BSCSEEEEECS-------SCEEEEEE
T ss_pred             cccceeeEEEEEcCCHHHHHHHHHhccCCEEEEEcC--CC---eEEEEeccCC-CceEEEEEeCC-------CCceeEEE
Confidence            347899999999999999999999999999987532  11   344543 221 22233333321       23778999


Q ss_pred             EEECC---HHHHHHHHHHcCCeeeeCCcc-CCCCceEEEEEECCCCcEEEEEecCC----------------------CC
Q 022831           98 IATED---VYKMVENIRAKGGNVTREPGP-LKGMTTHFAFVKDPDGYIFELIQRGP----------------------TP  151 (291)
Q Consensus        98 ~~v~d---~~~~~~~l~~~G~~~~~~~~~-~~~g~~~~~~~~dP~G~~iel~~~~~----------------------~~  151 (291)
                      |.|+|   +++++++|+++|+++...+.. ..++ ...+||+||+|+.|||++...                      .+
T Consensus        71 ~~v~~~~dl~~~~~~l~~~G~~~~~~~~~~~~~~-~~~~~f~DPdG~~iel~~~~~~~~~~~~~~~p~~~~~~~~~~~~~  149 (309)
T 3hpy_A           71 FKVLDKATLEKLDADLQAYGLTTTRIPAGEMLET-GERVRFELPSGHLIELYAEKTCVGNGISEVNPAPWNAQREHGIAP  149 (309)
T ss_dssp             EEESCHHHHHHHHHHHHHHTCCCEEECTTSSTTB-CCEEEEECTTSCEEEEESCBCBCCCSSCSBSCCSCCGGGGSSSCC
T ss_pred             EEECCHHHHHHHHHHHHhCCCceeeccCCccCCC-eeEEEEECCCCCEEEEEEccceecccccccCCCCCccccCCCccc
Confidence            99986   999999999999998765543 2233 335899999999999997542                      12


Q ss_pred             CCceeeeeeeCCchhhHHHHHHhcCCeeeeeccCcc-cceeeeeeccCCCCcceEEEEeEecCceeeccCceeeEEEEEe
Q 022831          152 EPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPE-LKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAIST  230 (291)
Q Consensus       152 ~~~~hv~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~~hia~~v  230 (291)
                      .+|+|+.|.|+|++++.+||+++|||++......+. +.....|+..++.  ...+.+...      +...+++|++|.|
T Consensus       150 ~~i~Hv~l~v~D~~~~~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~------~~~~~~~Hiaf~v  221 (309)
T 3hpy_A          150 IQLDHCLLYGPNIAEVQKIFTEVLGFYLVERVLSPDGDSDMGIWLSCSHK--VHDIAFVEY------PEKGKLHHCSFLL  221 (309)
T ss_dssp             SEEEEEEEEESCHHHHHHHHHHTSCCEEEEEEECSSSCSEEEEEEESSSS--SCSEEEEEC------SSTTEEEEEEEEC
T ss_pred             ceeeeEEEEeCCHHHHHHHHHHhcCCEEEEEEecCCCCceEEEEEecCCC--ceeEEEecC------CCCCceeEEEEEC
Confidence            348999999999999999999999999877654332 2234555554433  233444331      1235799999999


Q ss_pred             cChHHH---HHHHHHHHHhhCCeeeecccccCCCCceEEEEECCCCCeEEEEechhhh
Q 022831          231 DDVYKS---AEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNEDFL  285 (291)
Q Consensus       231 ~di~~~---~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~~~~  285 (291)
                      +|++++   ++++    +++|+++..+|+++..++.+++||+|||||+|||+......
T Consensus       222 ~d~~~v~~~~~~l----~~~G~~~~~~p~~~~~~~~~~~y~~DPdG~~iE~~~~g~~~  275 (309)
T 3hpy_A          222 ESWEQVLRAGDIM----SMNEVNVDIGPTRHGVTRGCTIYAWDPSGNRFETFMGGYHP  275 (309)
T ss_dssp             SSHHHHHHHHHHH----HHTTCCBSSCSEECSSSSEEEEEEECTTSCEEEEEEECCCC
T ss_pred             CCHHHHHHHHHHH----HHCCCEEEeCCccCCCCccEEEEEECCCCCEEEEEeCCccc
Confidence            987765   4556    99999999888877765678899999999999999875443

>4ghg_A Homoprotocatechuate 2,3-dioxygenase; oxygen activation, Fe(II), 2-His-1-carboxylate triad, 4-nitrocatechol, OXY complex, oxidoreductase; HET: P6G PG4 DHY; 1.50A {Brevibacterium fuscum} PDB: 1q0o_A 1q0c_A 2iga_A* 2ig9_A 3ojj_A* 3bza_A* 3ojk_A* 3ojt_A* 3ojn_A* 4ghh_A* 4ghc_A 4ghd_A* 4ghe_A* 4ghf_A* 3eck_A* 3ecj_A*

Probab=100.00  E-value=1.6e-33  Score=245.50  Aligned_cols=242  Identities=19%  Similarity=0.193  Sum_probs=182.4

Q ss_pred             CCccceeeEEEEeCCHHHHHHHHHHhcCCEEEEEeccCCCceeeEEeeccCCCcceEEEeeecCCCCcccCCCCceEEEE
Q 022831           19 KDKRRLLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHLAI   98 (291)
Q Consensus        19 ~~~~~i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~g~~~~~i~~   98 (291)
                      ..|++|.||.|.|+|++++++||+++|||++..+...      .+++..........+.+....       ..++.|++|
T Consensus        13 p~I~rl~hV~l~V~DLe~s~~FY~dvLGL~~~~~~~~------~~~lr~~~~~~~~~l~l~~~~-------~~gl~~~a~   79 (365)
T 4ghg_A           13 PDILRCAYAELVVTDLAKSRNFYVDVLGLHVSYEDEN------QIYLRSFEEFIHHNLVLTKGP-------VAALKAMAF   79 (365)
T ss_dssp             CCEEEEEEEEEEESCHHHHHHHHTTTTCCEEEEECSS------EEEEECTTCCSSCSEEEEECS-------SCEEEEEEE
T ss_pred             CCCCEEEEEEEEeCCHHHHHHHHhhCCCCEEEEEcCC------EEEEEeCCCCcceEEEeccCC-------CCCcceEEE
Confidence            5799999999999999999999999999999876321      456655433333334444321       237889999


Q ss_pred             EECC---HHHHHHHHHHcCCeeeeCCccCCCCceEEEEEECCCCcEEEEEecCC---------------CCCCceeeeee
Q 022831           99 ATED---VYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFELIQRGP---------------TPEPLCQVMLR  160 (291)
Q Consensus        99 ~v~d---~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dP~G~~iel~~~~~---------------~~~~~~hv~l~  160 (291)
                      .|.+   ++++.++|+++|+++...+.....+....++|.||+|+.|||+....               .+.++.|+.|.
T Consensus        80 ~v~s~~dLd~~~~~L~~~Gv~v~~~~~~~~~~~g~~~~f~DPdG~~iEl~~~~~~~~~~~~~~~~~~~~~~~rlgHV~L~  159 (365)
T 4ghg_A           80 RVRTPEDVDKAEAYYQELGCRTERRKDGFVKGIGDALRVEDPLGFPYEFFFETTHVERLHMRYDLYSAGELVRLDHFNQV  159 (365)
T ss_dssp             EESSHHHHHHHHHHHHHTTCCEEEETTCSSTTBCSEEEEECTTSCEEEEECCBCCCCCCTTCTTTCCTTCCCEEEEEEEE
T ss_pred             EeCCHHHHHHHHHHHHHcCCcceeccccccCCCceEEEEECCCCCEEEEEEEeeccccccccccccccccCcceeEEEEe
Confidence            9975   78889999999999876544333232335889999999999986542               13469999999


Q ss_pred             eCCchhhHHHHHHhcCCeeeeeccCcccceeeeeeccCCCCcceEEEEeEecCceeeccCceeeEEEEEecChHHHHHHH
Q 022831          161 VGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAISTDDVYKSAEVV  240 (291)
Q Consensus       161 v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~~hia~~v~di~~~~~~l  240 (291)
                      |+|++++.+||+. |||++++....+++.....|+.....  ++.+.+..       ..+++++|++|+|+|++++.+..
T Consensus       160 v~D~~~t~~Fy~~-LGf~~sd~~~~~~g~~~~~f~~~~~~--hH~la~~~-------~~~~~lhHvaf~v~d~d~v~~~~  229 (365)
T 4ghg_A          160 TPDVPRGRKYLED-LGFRVTEDIQDDEGTTYAAWMHRKGT--VHDTALTG-------GNGPRLHHVAFSTHEKHNIIQIC  229 (365)
T ss_dssp             ESCHHHHHHHHHH-TTCEEEEEEECTTSCEEEEEEESSSS--SCSEEEEE-------SSBSEEEEEEEECSSHHHHHHHH
T ss_pred             ecCHHHHHHHHHh-cCCEEEEEEecCCCceeEEeeecCCc--ccceeeec-------CCCCceeEEEEecCCHHHHHHHH
Confidence            9999999999965 99999887665555555667665443  33444433       12458999999999988877666


Q ss_pred             HHHHHhhCC--eeeecccccCCCCceEEEEECCCCCeEEEEechhh
Q 022831          241 NLVTQELGG--KITRQPGPIPGLNTKITSFVDPDGWKTVLVDNEDF  284 (291)
Q Consensus       241 ~~~~~~~G~--~~~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~~~  284 (291)
                      + ++.++|+  .+.++|++|..+...++||+||+|++||++....+
T Consensus       230 d-~l~~~g~~~~i~~GpgRH~~~~~~f~Y~~dP~G~~iE~~t~g~~  274 (365)
T 4ghg_A          230 D-KMGALRISDRIERGPGRHGVSNAFYLYILDPDNHRIEIYTQDYY  274 (365)
T ss_dssp             H-HHHHTTCGGGEEEEEEECSTTCCEEEEEECTTCCEEEEEECCCC
T ss_pred             H-HHHhCCCCceeEeCCCccCCCCcEEEEEECCCCceEEEEcCCcC
Confidence            3 3377887  46789999988778899999999999999987654

>3oaj_A Putative ring-cleaving dioxygenase MHQO; structural genomics, protein structure initiative, PSI-biolo unknown function; 1.40A {Bacillus subtilis subsp}

Probab=100.00  E-value=3.4e-33  Score=241.08  Aligned_cols=246  Identities=11%  Similarity=0.079  Sum_probs=172.0

Q ss_pred             CCccceeeEEEEeCCHHHHHHHHHHhcCCEEEEEeccCC-CceeeEEeeccCCCcceEEEeeecCCCCcccCC-CCceEE
Q 022831           19 KDKRRLLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPE-EKYSNAFLGFGPEQSYFVVELTYNYGVTSYDIG-TGFGHL   96 (291)
Q Consensus        19 ~~~~~i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~g-~~~~~i   96 (291)
                      |++.+|+||+|.|+|++++.+||+++|||++..+..+.+ .+....+++.........+.+...........+ .++.|+
T Consensus         4 ~~i~~i~Hv~l~v~Dl~~s~~FY~~vLGl~~v~~~~~~~~~~~~~l~~~~~~g~~g~~l~l~~~~~~~~~~~~~~~~~hi   83 (335)
T 3oaj_A            4 KKTMGIHHITAIVGHPQENTDFYAGVLGLRLVKQTVNFDDPGTYHLYFGNEGGKPGTIITFFPWAGARQGVIGDGQVGVT   83 (335)
T ss_dssp             CCCCSEEEEEEEESCHHHHHHHHTTTTCCEEEEEEECSSCTTSEEEEEESTTCCTTSEEEEEECTTCCBCBCCBSEEEEE
T ss_pred             ccCCcccEEEEEeCCHHHHHHHHHHhcCCEEEeeecCCCCCceEEEEEecCCCCCCcEEEEEECCCCCCCCCCCCceEEE
Confidence            578999999999999999999999999999987754332 222234444322222345666553332222223 367899


Q ss_pred             EEEEC--CHHHHHHHHHHcCCeeeeCCccCCCCceEEEEEECCCCcEEEEEecCCC---------------CCCceeeee
Q 022831           97 AIATE--DVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFELIQRGPT---------------PEPLCQVML  159 (291)
Q Consensus        97 ~~~v~--d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dP~G~~iel~~~~~~---------------~~~~~hv~l  159 (291)
                      +|.|+  |+++++++|.++|+++..  .. .++ ...+||+|||||.|||++..+.               ..+|+||+|
T Consensus        84 af~V~~~dl~~~~~rL~~~Gv~~~~--~~-~~g-~~~~~f~DPdGn~iEl~~~~~~~~~~~~~~~v~~~~~i~gl~Hv~L  159 (335)
T 3oaj_A           84 SYVVPKGAMAFWEKRLEKFNVPYTK--IE-RFG-EQYVEFDDPHGLHLEIVEREEGEANTWTFGEVTPDVAIKGFGGATL  159 (335)
T ss_dssp             EEEECTTCHHHHHHHHHHTTCCCEE--EE-ETT-EEEEEEECTTSCEEEEEECSCSCCCCCCBTTBCTTTSCCEEEEEEE
T ss_pred             EEEecHHHHHHHHHHHHhCcceeee--ec-cCC-cEEEEEECCCCCEEEEEEeCCCCcCCCcCCCCChhhhhccccceEE
Confidence            99999  999999999999999764  22 233 3458999999999999987531               135899999


Q ss_pred             eeCCchhhHHHHHHhcCCeeeeeccCcccceeeeeeccCCCCcceEEEEeEecCceee-ccCceeeEEEEEecCh---HH
Q 022831          160 RVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEY-TKGNAYAQVAISTDDV---YK  235 (291)
Q Consensus       160 ~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~-~~~~g~~hia~~v~di---~~  235 (291)
                      .|+|++++.+||+++|||++.....   + . ..+.. ++.  ...+.+....+.... ++..+++|+||.|+|.   ++
T Consensus       160 ~v~Dle~t~~FY~~vLG~~~~~~~~---~-~-~~~~~-g~~--~~~l~l~~~~~~~~~~~g~g~~~HiAf~v~d~~~l~~  231 (335)
T 3oaj_A          160 LSEQPDKTADLLENIMGLERVGKEG---D-F-VRYRS-AGD--IGNVIDLKLTPIGRGQMGAGTVHHIAWRANDDEDQLD  231 (335)
T ss_dssp             ECSSHHHHHHHHHHTSCCEEEEEET---T-E-EEEEC-SSS--SSCEEEEESSCCCBCBCSBTEEEEEEEEESSHHHHHH
T ss_pred             EECCHHHHHHHHHHHhCCEEeeccC---C-E-EEEEe-CCC--CcEEEEEeCCCCCcCCCCCcceEEEEEEcCCHHHHHH
Confidence            9999999999999999999887532   1 1 22222 222  234555443322111 2234799999999984   44


Q ss_pred             HHHHHHHHHHhhCCeeeecccccCCCCceEEEEECCCCCeEEEEechh
Q 022831          236 SAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNED  283 (291)
Q Consensus       236 ~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~~  283 (291)
                      +.++|    +++|+++..... +..  .+.+||+||+|++|||+.+.|
T Consensus       232 ~~~~L----~~~G~~~~~~~~-r~~--~~siYfrDP~G~~iEl~td~p  272 (335)
T 3oaj_A          232 WQRYI----ASHGYGVTPVRD-RNY--FNAIYFREHGEILFEIATDPP  272 (335)
T ss_dssp             HHHHH----HHTTCCCCCCEE-CSS--SEEEEEECTTSCEEEEEESCS
T ss_pred             HHHHH----HHCCCCcccccc-CCc--EEEEEEECCCCcEEEEEeCCC
Confidence            66666    999998644322 222  467999999999999999744

>3b59_A Glyoxalase/bleomycin resistance protein/dioxygena; 11004Z, NYSGXRC, PSI-2, structural genomics, Pro structure initiative; 2.53A {Novosphingobium aromaticivorans}

Probab=100.00  E-value=5.9e-33  Score=237.80  Aligned_cols=235  Identities=21%  Similarity=0.291  Sum_probs=178.1

Q ss_pred             CCccceeeEEEEeCCHHHHHHHHHHhcCCEEEEEeccCCCceeeEEeeccCCCcceEEEeeecCCCCcccCCCCceEEEE
Q 022831           19 KDKRRLLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHLAI   98 (291)
Q Consensus        19 ~~~~~i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~g~~~~~i~~   98 (291)
                      +++++|.|+.|.|+|++++++||+++|||++.....  .    ..++..+.......+.+....       ..+..+++|
T Consensus         4 ~~i~~l~~v~l~v~Dl~~a~~FY~~vlG~~~~~~~~--~----~~~l~~~~~~~~~~l~l~~~~-------~~~~~~~~~   70 (310)
T 3b59_A            4 SRVTEIRYVGYGVKDFDAEKAFYADVWGLEPVGEDA--N----NAWFKAQGADEHHVVQLRRAD-------ENRIDVIAL   70 (310)
T ss_dssp             CCEEEEEEEEEEESSHHHHHHHHHHTTCCEEEEECS--S----EEEEECTTSCCSCSEEEEECS-------SCEEEEEEE
T ss_pred             eecceeeEEEEecCCHHHHHHHHHhCcCCEEeeecC--C----eEEEEECCCCCCEEEEEEECC-------CCCeeEEEE
Confidence            678999999999999999999999999999976531  1    455554321012334444321       336789999


Q ss_pred             EE---CCHHHHHHHHHHcCCeeeeCCcc--CCCCceEEEEEECCCCcEEEEEecCC------------CCCCceeeeeee
Q 022831           99 AT---EDVYKMVENIRAKGGNVTREPGP--LKGMTTHFAFVKDPDGYIFELIQRGP------------TPEPLCQVMLRV  161 (291)
Q Consensus        99 ~v---~d~~~~~~~l~~~G~~~~~~~~~--~~~g~~~~~~~~dP~G~~iel~~~~~------------~~~~~~hv~l~v  161 (291)
                      .|   +|+++++++|+++|+++...+..  .+++.+ .++|+||+|+.|+|++...            .+.++.|+.|.|
T Consensus        71 ~v~~~~dld~~~~~l~~~G~~~~~~~~~~~~~~~~~-~~~~~DPdG~~iel~~~~~~~~~~~~~~~~~~~~~l~hv~l~v  149 (310)
T 3b59_A           71 AADSRSDVDALRASVEAAGCKVASEPAVLATPGGGY-GFRFFSPDGLLFEVSSDVAKGAKRDLARWEGVPVKISHIVLHS  149 (310)
T ss_dssp             EESSHHHHHHHHHHHHHHTCCBCCCSEECCSTTCCE-EEEEECTTSCEEEEEECCCCCCCCCCCTTCCCCCEEEEEEEEE
T ss_pred             EeCCHHHHHHHHHHHHhCCCeEeecCccccccCCce-EEEEECCCCCEEEEEEcccccCCCccCCCCCcCcEeceEEEec
Confidence            99   78999999999999998777654  344444 4789999999999998753            134589999999


Q ss_pred             CCchhhHHHHHHhcCCeeeeeccCcccceeeeeeccCCCCcceEEEEeEecCceeeccCceeeEEEEEecChHHH---HH
Q 022831          162 GDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAISTDDVYKS---AE  238 (291)
Q Consensus       162 ~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~~hia~~v~di~~~---~~  238 (291)
                      +|++++.+||+++|||++......     ...|+..+..  +..+.+...       . .|++|++|.|+|++++   ++
T Consensus       150 ~D~~~a~~FY~~~LG~~~~~~~~~-----~~~fl~~~~~--~~~l~l~~~-------~-~g~~hi~f~v~d~d~~~~~~~  214 (310)
T 3b59_A          150 PNHQDMVKFFTDVLGFKVSDWLGD-----FMCFLRCNSA--HHRIAILPG-------P-PCLNHVAYDMLSVDDMMRGAH  214 (310)
T ss_dssp             TTHHHHHHHHHHTSCCEEEEEETT-----TEEEEESSSB--SCSEEEEES-------S-SEEEEEEEECSSHHHHHHHHH
T ss_pred             CCHHHHHHHHHhCCCCEEEEeeCC-----eEEEEecCCC--cceEEEECC-------C-CceEEEEEEcCCHHHHHHHHH
Confidence            999999999999999998865421     2334443322  334555431       1 5789999999998877   77


Q ss_pred             HHHHHHHhhCCeeeecccccCCCCceEEEEECCCCCeEEEEechhhhh
Q 022831          239 VVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNEDFLK  286 (291)
Q Consensus       239 ~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~~~~~  286 (291)
                      ++    +++|+++..+|++++.++.+++|++|||||.||+++..+..+
T Consensus       215 ~l----~~~G~~~~~~p~~~~~~~~~~~y~~DPdG~~iE~~~~~~~~d  258 (310)
T 3b59_A          215 RL----KVKGIDIGWGPGRHTAGNNTFSYFVTPGGFVTEYTSELEEVD  258 (310)
T ss_dssp             HH----HHTTCCCSEEEEECSTTCCEEEEEECTTSCEEEEEECCCBCC
T ss_pred             HH----HHcCCceeecCccccCCCcEEEEEECCCCCEEEEEeCccEec
Confidence            77    999999999998876655688999999999999999765543

>1mpy_A Catechol 2,3-dioxygenase; extradiol dioxygenase, non heme iron dioxygenase, metapyrocatechase, oxidoreductase; 2.80A {Pseudomonas putida} SCOP: d.32.1.3 d.32.1.3

Probab=100.00  E-value=7e-33  Score=237.10  Aligned_cols=241  Identities=17%  Similarity=0.246  Sum_probs=171.7

Q ss_pred             CCccceeeEEEEeCCHHHHHHHHHHhcCCEEEEEeccCCCceeeEEeeccCCCcceEEEeeecCCCCcccCCCCceEEEE
Q 022831           19 KDKRRLLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHLAI   98 (291)
Q Consensus        19 ~~~~~i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~g~~~~~i~~   98 (291)
                      .++++|+||.|.|+|++++++||+++|||++......  +   ..++..+.....+.+.+...       ..++..|++|
T Consensus         3 ~~i~~i~hv~l~v~Dl~~a~~FY~~~lG~~~~~~~~~--~---~~~l~~~~~~~~~~l~~~~~-------~~~~~~~~~f   70 (307)
T 1mpy_A            3 KGVMRPGHVQLRVLDMSKALEHYVELLGLIEMDRDDQ--G---RVYLKAWTEVDKFSLVLREA-------DEPGMDFMGF   70 (307)
T ss_dssp             TSEEEEEEEEEEESCHHHHHHHHHHTTCCEEEEECTT--S---CEEEECTTCCBSCSEEEEEC-------SSCEEEEEEE
T ss_pred             cccceeeeEEEEeCCHHHHHHHHHHccCCEEEeecCC--C---cEEEEecCCCCceEEEEccC-------CCCCcceEEE
Confidence            3578999999999999999999999999999865321  1   34555433222222333221       1237789999


Q ss_pred             EE---CCHHHHHHHHHHcCCeeeeCCc-cCCCCceEEEEEECCCCcEEEEEecCC----------------------CCC
Q 022831           99 AT---EDVYKMVENIRAKGGNVTREPG-PLKGMTTHFAFVKDPDGYIFELIQRGP----------------------TPE  152 (291)
Q Consensus        99 ~v---~d~~~~~~~l~~~G~~~~~~~~-~~~~g~~~~~~~~dP~G~~iel~~~~~----------------------~~~  152 (291)
                      .|   +|+++++++|+++|+++...+. ..+++.+ .++|+||+|+.|+|++...                      ...
T Consensus        71 ~v~~~~dv~~~~~~l~~~G~~~~~~~~~~~~~~~~-~~~~~DPdG~~iel~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  149 (307)
T 1mpy_A           71 KVVDEDALRQLERDLMAYGCAVEQLPAGELNSCGR-RVRFQAPSGHHFELYADKEYTGKWGLNDVNPEAWPRDLKGMAAV  149 (307)
T ss_dssp             EESCHHHHHHHHHHHHHHTCCCEEECTTSSTTBCC-EEEEECTTSCEEEEESCBCBCCSTTCCSBSCCSSCSCCCTTCCC
T ss_pred             EeCCHHHHHHHHHHHHHcCCceecCCcccCCCceE-EEEEECCCCCEEEEEEcchhcccccccccCCcCCcccCCCCCcC
Confidence            99   7899999999999999877664 2333333 4789999999999998531                      123


Q ss_pred             CceeeeeeeCCchhhHHHHHHhcCCeeeeeccCcccceeeeeeccCCCCcceEEEEeEecCceeeccCceeeEEEEEecC
Q 022831          153 PLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAISTDD  232 (291)
Q Consensus       153 ~~~hv~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~~hia~~v~d  232 (291)
                      ++.|+.|.|+|++++++||+++|||++........+.....++..+..  ...+.+...      +...+++|++|.|+|
T Consensus       150 ~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~l~~~~~--~~~~~~~~~------~~~g~~~hi~f~v~d  221 (307)
T 1mpy_A          150 RFDHALMYGDELPATYDLFTKVLGFYLAEQVLDENGTRVAQFLSLSTK--AHDVAFIHH------PEKGRLHHVSFHLET  221 (307)
T ss_dssp             EEEEEEEEESCHHHHHHHHHHTTCCEEEEEEECTTCCEEEEEEESSSB--SCSEEEEEC------SSSSEEEEEEEECSC
T ss_pred             ceeeEEEEcCCHHHHHHHHHHHcCCeeEeeeecCCCcEEEEEEEcCCC--ceeEEEecC------CCCCcceEEEEEcCC
Confidence            489999999999999999999999998765432222111234443222  223444321      112247999999994


Q ss_pred             ---hHHHHHHHHHHHHhhCCeeeecccccCCCCceEEEEECCCCCeEEEEechhh
Q 022831          233 ---VYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNEDF  284 (291)
Q Consensus       233 ---i~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~~~  284 (291)
                         ++++++++    +++|+++..+|.+++...++.+||+|||||+|||+++...
T Consensus       222 ~~dv~~~~~~l----~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~~~  272 (307)
T 1mpy_A          222 WEDLLRAADLI----SMTDTSIDIGPTRHGLTHGKTIYFFDPSGNRNEVFCGGDY  272 (307)
T ss_dssp             HHHHHHHHHHH----HHHTCCEEEEEEECSSTTCEEEEEECTTSCEEEEEECCCB
T ss_pred             HHHHHHHHHHH----HHCCCceeeCCccCCCCCceEEEEECCCCcEEEEEecccc
Confidence               56667788    9999999888877654446789999999999999997543

>2zyq_A Probable biphenyl-2,3-DIOL 1,2-dioxygenase BPHC; extradiol, DHSA, TB, catechol, cholesterol, steroid, aromatic hydrocarbons catabolism; HET: TAR; 2.00A {Mycobacterium tuberculosis} PDB: 2zi8_A*

Probab=100.00  E-value=1.6e-32  Score=234.03  Aligned_cols=238  Identities=12%  Similarity=0.126  Sum_probs=172.1

Q ss_pred             CCccceeeEEEEeCCHHHHHHHHHHhcCCEEEE-EeccCCCceeeEEeeccCCCcceEEEeeecCCCCcccCCCCceEEE
Q 022831           19 KDKRRLLHAVYRVGDLDRTIKYYTECFGMELLR-KRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHLA   97 (291)
Q Consensus        19 ~~~~~i~hv~l~v~d~~~~~~FY~~~lG~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~g~~~~~i~   97 (291)
                      |++++|+|+.|.|+|++++++||+++|||++.. +.   ++   ..++..+...  +.+.+...       ...+..|++
T Consensus         1 M~i~~i~hv~l~v~Dl~~a~~FY~~~lG~~~~~~~~---~~---~~~~~~~~~~--~~l~l~~~-------~~~~~~~~~   65 (300)
T 2zyq_A            1 MSIRSLGYLRIEATDMAAWREYGLKVLGMVEGKGAP---EG---ALYLRMDDFP--ARLVVVPG-------EHDRLLEAG   65 (300)
T ss_dssp             -CCCEEEEEEEEESCHHHHHHHHHHTSCCEECSSCC---SS---CEEEESSSSS--CSEEEEEC-------SSCEEEEEE
T ss_pred             CCcceEEEEEEEeCCHHHHHHHHHHccCCEEeccCC---CC---eEEEEeCCCc--EEEEEecC-------CCCCcceEE
Confidence            578999999999999999999999999999865 32   11   3455543322  23434332       124678999


Q ss_pred             EEECC---HHHHHHHHHHcCCeeeeCCccC---CCCceEEEEEECCCCcEEEEEec-CCC---------------CCCce
Q 022831           98 IATED---VYKMVENIRAKGGNVTREPGPL---KGMTTHFAFVKDPDGYIFELIQR-GPT---------------PEPLC  155 (291)
Q Consensus        98 ~~v~d---~~~~~~~l~~~G~~~~~~~~~~---~~g~~~~~~~~dP~G~~iel~~~-~~~---------------~~~~~  155 (291)
                      |.|+|   +++++++|+++|+++...+...   .++ ...++|+||+||.|||++. ...               +.++.
T Consensus        66 ~~v~~~~dl~~~~~~l~~~G~~~~~~~~~~~~~~~~-~~~~~~~DPdG~~iel~~~~~~~~~~~~~~~~~~~~~~~~~l~  144 (300)
T 2zyq_A           66 WECANAEGLQEIRNRLDLEGTPYKEATAAELADRRV-DEMIRFADPSGNCLEVFHGTALEHRRVVSPYGHRFVTGEQGMG  144 (300)
T ss_dssp             EECSSHHHHHHHHHHHHHHTCCCEECCHHHHHHHTC-SEEEEEECTTCCEEEEEECCCCCCSCCCCTTCCCBCCGGGCSC
T ss_pred             EEeCCHHHHHHHHHHHHHcCCeEEeCChhhcccccc-eEEEEEECCCCCEEEEEEcCCcCCCCCccCCCcccccCCCccC
Confidence            99975   8899999999999987655432   233 3358899999999999987 211               24689


Q ss_pred             eeeeeeCCchhhHHHHHHhcCCeeeeeccCc--------cc-ceeeeeeccCCCCcceEEEEeEecCceeeccCceeeEE
Q 022831          156 QVMLRVGDLGRSIKFYEKALGMKLLRTIDSP--------EL-KCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQV  226 (291)
Q Consensus       156 hv~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~--------~~-~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~~hi  226 (291)
                      |+.|.|+|++++.+||+++|||++......+        ++ .....++..++.  +..+.+...      +...+++|+
T Consensus       145 hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~--~~~~~~~~~------~~~~g~~h~  216 (300)
T 2zyq_A          145 HVVLSTRDDAEALHFYRDVLGFRLRDSMRLPPQMVGRPADGPPAWLRFFGCNPR--HHSLAFLPM------PTSSGIVHL  216 (300)
T ss_dssp             EEEEECSCHHHHHHHHHTTTCCEEEEEEEECGGGGTCCTTSCCEEEEEEESSSB--SCSEEEESS------CCSSSEEEE
T ss_pred             eEEEEeCCHHHHHHHHHHhcCCEEeeeecccccccccCCCCCceEEEEEEECCC--ccEEEEecC------CCCCCceEE
Confidence            9999999999999999999999987543211        11 123344443322  233444321      124578999


Q ss_pred             EEEecChHHH---HHHHHHHHHhhCCeeeecccccCCCCceEEEEECCCCCeEEEEechhh
Q 022831          227 AISTDDVYKS---AEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNEDF  284 (291)
Q Consensus       227 a~~v~di~~~---~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~~~  284 (291)
                      +|.|+|++++   ++++    +++|+++..+|.+++..+.+++||+|||||+|||++....
T Consensus       217 af~v~d~~~v~~~~~~l----~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iEl~~~~~~  273 (300)
T 2zyq_A          217 MVEVEQADDVGLCLDRA----LRRKVPMSATLGRHVNDLMLSFYMKTPGGFDIEFGCEGRQ  273 (300)
T ss_dssp             EEEBSSHHHHHHHHHHH----HHTTCCEEEEEEEESSSCCEEEEEECTTSSEEEEEECCCB
T ss_pred             EEEeCCHHHHHHHHHHH----HHCCCceeecccccCCCCeEEEEEECCCCCEEEEEeCCeE
Confidence            9999996664   7777    9999999988877765457889999999999999986543

>1zsw_A Metallo protein, glyoxalase family protein; hypothetical protein from glyoxalase family, structural GENO PSI, protein structure initiative; 1.65A {Bacillus cereus} SCOP: d.32.1.10 d.32.1.10

Probab=100.00  E-value=9.4e-32  Score=233.11  Aligned_cols=247  Identities=12%  Similarity=0.052  Sum_probs=170.2

Q ss_pred             CccceeeEEEEeCCHHHHHHHHHHhcCCEEEEEeccCC-CceeeEEeeccCCCcceEEEeeecCCCCc-ccCCCCceEEE
Q 022831           20 DKRRLLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPE-EKYSNAFLGFGPEQSYFVVELTYNYGVTS-YDIGTGFGHLA   97 (291)
Q Consensus        20 ~~~~i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~l~~~~~~~~-~~~g~~~~~i~   97 (291)
                      ++++|+||.|.|+|++++++||+++|||++.......+ ......++..+.......+.+........ .....+..|++
T Consensus        27 ~i~~i~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~l~l~~~~~~~~~~~~~~~~~hia  106 (338)
T 1zsw_A           27 EIKGHHHISMVTKNANENNHFYKNVLGLRRVKMTVNQDDPSMYHLFYGDKTGSPGTELSFFEIPLVGRTYRGTNAITRIG  106 (338)
T ss_dssp             CCCSEEEEEEEESCHHHHHHHHHTTTCCEEEEEEEETTEEEEEEEEEESTTCCTTSEEEEEECTTCCBCBCCBSEEEEEE
T ss_pred             cCccccEEEEEcCCHHHHHHHHHHhcCCEEEEeecccCCCceEEEEEcCCCCCCCCEEEEEECCCCccCcCCCCCeeeEE
Confidence            48999999999999999999999999999986542111 11122333322112234555544322211 11224678999


Q ss_pred             EEEC---CHHHHHHHHHHcCCeeeeCCccCCCCceEEEEEECCCCcEEEEEecCCC------------------CCCcee
Q 022831           98 IATE---DVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFELIQRGPT------------------PEPLCQ  156 (291)
Q Consensus        98 ~~v~---d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dP~G~~iel~~~~~~------------------~~~~~h  156 (291)
                      |.|+   |+++++++|+++|+++...+.  .+|. ..++|+||||+.|||++....                  ..++.|
T Consensus       107 f~v~~~~dld~~~~~l~~~G~~~~~~~~--~~G~-~~~~f~DPdG~~iel~~~~~~~~~~~~p~~~~~~~~~~~~~~l~h  183 (338)
T 1zsw_A          107 LLVPSEDSLHYWKERFEKFDVKHSEMTT--YANR-PALQFEDAEGLRLVLLVSNGEKVEHWETWEKSEVPAKHQIQGMGS  183 (338)
T ss_dssp             EEESCHHHHHHHHHHHHHTTCEECCSEE--ETTE-EEEEEECTTCCEEEEEECTTCCCTTCCCCTTCSSCGGGSCCEEEE
T ss_pred             EEcCCHHHHHHHHHHHHHCCCccccccc--cCCc-EEEEEECCCCCEEEEEEcCCccccccCcCcCCCCCccccCceEEE
Confidence            9998   699999999999999876544  2444 468899999999999987531                  135899


Q ss_pred             eeeeeCCchhhHHHHHHhcCCeeeeeccCcccceeeeeeccCCCCcceEEEEeEecCceeeccCceeeEEEEEec---Ch
Q 022831          157 VMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAISTD---DV  233 (291)
Q Consensus       157 v~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~~hia~~v~---di  233 (291)
                      +.|.|+|++++++||+++|||++.....  +  +..+..+.++... ..+.+.. ..........+++|++|.|+   |+
T Consensus       184 v~l~v~Dl~~a~~FY~~~LG~~~~~~~~--~--~~~~~~~~~g~~~-~~~~~~~-~~~~~~~~~~~~~hiaf~v~~~~dv  257 (338)
T 1zsw_A          184 VELTVRRLDKMASTLTEIFGYTEVSRND--Q--EAIFQSIKGEAFG-EIVVKYL-DGPTEKPGRGSIHHLAIRVKNDAEL  257 (338)
T ss_dssp             EEEEESCHHHHHHHHHHTTCCEEEEECS--S--EEEEESSTTCSTT-CEEEEEC-CSSBCBCCBTCEEEEEEEESSHHHH
T ss_pred             EEEEECCHHHHHHHHHHhcCCEEEeecC--C--eEEEEecCCCCce-EEEEecc-CCCCCCCCCCceEEEEEEeCCHHHH
Confidence            9999999999999999999999876542  1  2222221111101 2333322 11111112246899999999   68


Q ss_pred             HHHHHHHHHHHHhhCCeeeecccccCCCCceEEEEECCCCCeEEEEech
Q 022831          234 YKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNE  282 (291)
Q Consensus       234 ~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~  282 (291)
                      +++++++    +++|+++. +|....  +.+.+||+|||||.|||++..
T Consensus       258 ~~~~~~l----~~~G~~~~-~~~~~~--~~~~~~~~DPdG~~iEl~~~~  299 (338)
T 1zsw_A          258 AYWEEQV----KQRGFHSS-GIIDRF--YFKSLYFRESNGILFEIATDG  299 (338)
T ss_dssp             HHHHHHH----HHTTCCCC-CCEECS--SEEEEEEECTTCCEEEEEEEE
T ss_pred             HHHHHHH----HHCCCcee-eeeecC--ceEEEEEECCCCCEEEEEEcC
Confidence            8889999    99999985 555443  467899999999999999864

>3oxh_A RV0577 protein; kinase regulation, antibiotic resistance, mycobacterium tube structural genomics, PSI, protein structure initiative; HET: PMB XYL; 1.75A {Mycobacterium tuberculosis}

Probab=100.00  E-value=7e-32  Score=227.93  Aligned_cols=240  Identities=18%  Similarity=0.180  Sum_probs=169.7

Q ss_pred             cceeeEEEEeCCHHHHHHHHHHhcCCEEEEEeccCCC--ceeeEEeeccCCCcceEEEeeecCCCCcccCCCCceEEEEE
Q 022831           22 RRLLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEE--KYSNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHLAIA   99 (291)
Q Consensus        22 ~~i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~g~~~~~i~~~   99 (291)
                      ..+.|+.|.|+|++++++||+++|||++...... .+  .+  ..+..+. .  ....+.......+ .......+++|.
T Consensus        31 g~~~~v~l~v~D~~~a~~FY~~vlG~~~~~~~~~-~~~~~~--~~~~~~g-~--~~~~l~~~~~~~~-~~~~~~~~~~~~  103 (282)
T 3oxh_A           31 GTPNWVDLQTTDQSAAKKFYTSLFGWGYDDNPVP-GGGGVY--SMATLNG-E--AVAAIAPMPPGAP-EGMPPIWNTYIA  103 (282)
T ss_dssp             TSEEEEEEEESCHHHHHHHHHHHHCCEEEEEC------CCE--EEEEETT-E--EEEEEEECCSCC----CCCEEEEEEE
T ss_pred             CCcEEEEEecCCHHHHHHHHHHhcCcEEeecCCC-CCccCE--EEEEeCC-e--eeEeeccCCCCCC-CCCCCcEEEEEE
Confidence            4799999999999999999999999998764321 11  22  2233221 1  1122222111111 112355789999


Q ss_pred             ECCHHHHHHHHHHcCCeeeeCCccCCCCceEEEEEECCCCcEEEEEecCC--------CCCCceeeeeeeCCchhhHHHH
Q 022831          100 TEDVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFELIQRGP--------TPEPLCQVMLRVGDLGRSIKFY  171 (291)
Q Consensus       100 v~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dP~G~~iel~~~~~--------~~~~~~hv~l~v~D~~~~~~Fy  171 (291)
                      |+|+++++++|+++|+++..++...++. +.+++|+||+||.|+|++...        .+.++.|+.|.|+|++++++||
T Consensus       104 v~d~d~~~~~l~~~G~~~~~~p~~~~~~-g~~~~~~DP~G~~i~l~~~~~~~~~~~~~~~~~~~~~~l~v~D~~~a~~FY  182 (282)
T 3oxh_A          104 VDDVDAVVDKVVPGGGQVMMPAFDIGDA-GRMSFITDPTGAAVGLWQANRHIGATLVNETGTLIWNELLTDKPDLALAFY  182 (282)
T ss_dssp             CSCHHHHHTTTTTTTCEEEEEEEEETTT-EEEEEEECTTCCEEEEEEESSCCSCSBCSSTTSEEEEEEECSCHHHHHHHH
T ss_pred             eCCHHHHHHHHHHCCCEEEECCEecCCC-eEEEEEECCCCCEEEEEEccccCCccccCCCCccEEEEEEcCCHHHHHHHH
Confidence            9999999999999999998777766543 346899999999999999764        2567999999999999999999


Q ss_pred             HHhcCCeeeeeccCcccceeeeeeccCCCCcceEEEEeEecCceeeccCceeeEEEEEecChHHHHHHHHHHHHhhCCee
Q 022831          172 EKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKI  251 (291)
Q Consensus       172 ~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~~hia~~v~di~~~~~~l~~~~~~~G~~~  251 (291)
                      +++|||++......+...+..+...  +   .....+....    ....++.+|++|.|+|++++++++    +++|+++
T Consensus       183 ~~vlG~~~~~~~~~~~~~~~~~~~~--~---~~~~~~~~~~----~~~~~~~~~~~~~v~dvd~~~~~~----~~~G~~~  249 (282)
T 3oxh_A          183 EAVVGLTHSSMEIAAGQNYRVLKAG--D---AEVGGCMEPP----MPGVPNHWHVYFAVDDADATAAKA----AAAGGQV  249 (282)
T ss_dssp             HHHHCCEEEEC-------CEEEEET--T---EEEEEEECCS----STTCCSEEEEEEECSCHHHHHHHH----HHTTCEE
T ss_pred             HHHhCCeeeeccCCCCcceEEEEcC--C---ccEeeecCCC----CCCCCCeEEEEEEeCCHHHHHHHH----HHcCCEE
Confidence            9999999875431222233333222  1   1112221111    122346789999999999999999    9999999


Q ss_pred             eecccccCCCCceEEEEECCCCCeEEEEechh
Q 022831          252 TRQPGPIPGLNTKITSFVDPDGWKTVLVDNED  283 (291)
Q Consensus       252 ~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~~  283 (291)
                      ..+|...++ ++++++++||+||.|||+++.+
T Consensus       250 ~~~p~~~~~-~~~~~~~~DPdGn~~~l~~~~~  280 (282)
T 3oxh_A          250 IAEPADIPS-VGRFAVLSDPQGAIFSVLKAAP  280 (282)
T ss_dssp             EEEEEEETT-TEEEEEEECTTSCEEEEEEEC-
T ss_pred             ecCCeEcCC-CeEEEEEECCCCCEEEEEecCC
Confidence            999887775 5789999999999999999764

>2wl9_A Catechol 2,3-dioxygenase; aromatic hydrocarbons catabolism, iron, oxidoreductase; 1.90A {Rhodococcus SP} PDB: 2wl3_A

Probab=100.00  E-value=1.9e-32  Score=234.17  Aligned_cols=239  Identities=13%  Similarity=0.154  Sum_probs=171.0

Q ss_pred             CCccceeeEEEEeCCHHHHHHHHHHhcCCEEEEEeccCCCceeeEEeeccCCCcceEEEeeecCCCCcccCCCCceEEEE
Q 022831           19 KDKRRLLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHLAI   98 (291)
Q Consensus        19 ~~~~~i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~g~~~~~i~~   98 (291)
                      |.+++|+||.|.|+|++++++||+++|||++....  .++   ..++..+...  ..+.+....       ..+..|++|
T Consensus         2 m~i~~i~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~--~~~---~~~~~~~~~~--~~l~l~~~~-------~~~~~~~~f   67 (305)
T 2wl9_A            2 AKVTELGYLGLSVSNLDAWRDYAAGIMGMQVVDDG--EDD---RIYLRMDRWH--HRIVLHADG-------SDDLAYIGW   67 (305)
T ss_dssp             CCCCEEEEEEEECSCHHHHHHHHTTTTCCEEECCS--CTT---EEEEECSSBS--CSEEEECSS-------CCEEEEEEE
T ss_pred             CccceeeEEEEEeCCHHHHHHHHHhccCCEEeecc--CCC---eEEEEeCCCe--EEEEEEECC-------CCCeEEEEE
Confidence            34789999999999999999999999999987521  111   3455554322  234443221       236789999


Q ss_pred             EEC---CHHHHHHHHHHcCCeeeeCCccC--CCCceEEEEEECCCCcEEEEEec-CC------------------CCCCc
Q 022831           99 ATE---DVYKMVENIRAKGGNVTREPGPL--KGMTTHFAFVKDPDGYIFELIQR-GP------------------TPEPL  154 (291)
Q Consensus        99 ~v~---d~~~~~~~l~~~G~~~~~~~~~~--~~g~~~~~~~~dP~G~~iel~~~-~~------------------~~~~~  154 (291)
                      .|+   |+++++++|+++|+++...|...  ..+....++++||+|+.|||++. ..                  .+.++
T Consensus        68 ~v~~~~dl~~~~~~l~~~G~~~~~~p~~~~~~~~~~~~~~~~DPdG~~iel~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  147 (305)
T 2wl9_A           68 RVAGPVELDELAEQLKNAGIPFEVASDADAAERRVLGLVKLHDPGGNPTEIFYGPQVDTSSPFHPGRPMFGKFVTEGQGL  147 (305)
T ss_dssp             ECSSHHHHHHHHHHHHHTTCCCEECCHHHHHHTTEEEEEEEECTTCCEEEEEEEECBCTTSCCCCSSCCSSCBCCTTTCS
T ss_pred             EECCHHHHHHHHHHHHHCCCceEeCCcccccccCcEEEEEEECCCCCEEEEEECCCccCCCCcCCCCCcccceecCCcee
Confidence            997   69999999999999987665432  12334468899999999999876 21                  11369


Q ss_pred             eeeeeeeCCchhhHHHHHHhcCCeeeeeccCc--cc-ceeeeeeccCCCCcceEEEEeEecCceeeccCceeeEEEEEec
Q 022831          155 CQVMLRVGDLGRSIKFYEKALGMKLLRTIDSP--EL-KCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAISTD  231 (291)
Q Consensus       155 ~hv~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~--~~-~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~~hia~~v~  231 (291)
                      .|+.|.|+|++++.+|| ++|||++......+  ++ .....++..+..  +..+.+...      +..++++|++|.|+
T Consensus       148 ~hv~l~v~D~~~s~~FY-~vLG~~~~~~~~~~~~~g~~~~~~~~~~~~~--~~~~~~~~~------~~~~~~~hiaf~v~  218 (305)
T 2wl9_A          148 GHIIIREDDVEEATRFY-RLLGLEGAVEYKFALPNGAVGTPVFMHCNDR--HHSLAFGVG------PMDKRINHLMIEYT  218 (305)
T ss_dssp             CEEEECCSCHHHHHHHH-HHHTCEEEECBCEECTTSCEECCEEEESSSS--SCSEEECCS------CCSSSEEEEEEEES
T ss_pred             eeEEEECCCHHHHHHHH-HHcCCeeeeeEecccCCCccceEEEEEcCCC--ceEEEEecC------CCCCCceEEEEEcC
Confidence            99999999999999999 99999986542211  11 123344443322  223444321      12357899999999


Q ss_pred             Ch---HHHHHHHHHHHHhhCCeeeecccccCCCCceEEEEECCCCCeEEEEechhh
Q 022831          232 DV---YKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNEDF  284 (291)
Q Consensus       232 di---~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~~~  284 (291)
                      |+   +++++++    +++|+++..+|++++.++.+++||+|||||+|||+.....
T Consensus       219 d~~~v~~~~~~l----~~~G~~~~~~p~~~~~~~~~~~y~~DPdG~~iEl~~~~~~  270 (305)
T 2wl9_A          219 HLDDLGYAHDLV----RQQKIDVTLQIGKHSNDEALTFYCANPSGWLWEPGWGSRP  270 (305)
T ss_dssp             SHHHHHHHHHHH----HHTTCCEEEEEEECTTTCCEEEEEECTTSSEEEEEECCCC
T ss_pred             CHHHHHHHHHHH----HHcCCCccccCcccCCCCcEEEEEECCCCCEEEEEeCCEE
Confidence            84   5566677    9999999988887765456788999999999999987643

>1kw3_B 2,3-dihydroxybiphenyl dioxygenase; four TIME repetitions of the beta-alpha-beta-BETA-beta motif oxidoreductase; 1.45A {Pseudomonas SP} SCOP: d.32.1.3 d.32.1.3 PDB: 1dhy_A 1eiq_A 1eir_A* 1eil_A 1kw6_B* 1kw8_B* 1kw9_B* 1kwb_B 1kwc_B*

Probab=100.00  E-value=5.8e-32  Score=229.77  Aligned_cols=238  Identities=14%  Similarity=0.143  Sum_probs=169.9

Q ss_pred             ccceeeEEEEeCCHHHHHHHHHHhcCCEEEEEeccCCCceeeEEeeccCCCcceEEEeeecCCCCcccCCCCceEEEEEE
Q 022831           21 KRRLLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHLAIAT  100 (291)
Q Consensus        21 ~~~i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~g~~~~~i~~~v  100 (291)
                      +++|+||.|.|+|++++++||+++|||++..+..  .    ..++..+.....  +.+...       ...+..|++|.|
T Consensus         2 i~~i~hv~l~v~Dl~~a~~FY~~~lG~~~~~~~~--~----~~~l~~~~~~~~--l~~~~~-------~~~~~~~~~f~v   66 (292)
T 1kw3_B            2 IERLGYLGFAVKDVPAWDHFLTKSVGLMAAGSAG--D----AALYRADQRAWR--IAVQPG-------ELDDLAYAGLEV   66 (292)
T ss_dssp             CCEEEEEEEEESCHHHHHHHHHHTTCCEEEEEET--T----EEEEESSSBSCS--EEEEEC-------TTCEEEEEEEEC
T ss_pred             ceeEEEEEEEeCCHHHHHHHHHhcCCCEEeecCC--C----eEEEEcCCceEE--EEEccC-------CCCCccEEEEEE
Confidence            7899999999999999999999999999986532  1    344554432222  333221       123678999999


Q ss_pred             C---CHHHHHHHHHHcCCeeeeCCcc---CCCCceEEEEEECCCCcEEEEEecCCC------------------CCCcee
Q 022831          101 E---DVYKMVENIRAKGGNVTREPGP---LKGMTTHFAFVKDPDGYIFELIQRGPT------------------PEPLCQ  156 (291)
Q Consensus       101 ~---d~~~~~~~l~~~G~~~~~~~~~---~~~g~~~~~~~~dP~G~~iel~~~~~~------------------~~~~~h  156 (291)
                      +   |+++++++|+++|+++...+..   ..++ ...++|+||+|+.|||++....                  +.++.|
T Consensus        67 ~~~~dl~~~~~~l~~~G~~~~~~~~~~~~~~~~-~~~~~~~DPdG~~iel~~~~~~~~~~~~~~~~~~~~~~~~~~~l~h  145 (292)
T 1kw3_B           67 DDAAALERMADKLRQAGVAFTRGDEALMQQRKV-MGLLCLQDPFGLPLEIYYGPAEIFHEPFLPSAPVSGFVTGDQGIGH  145 (292)
T ss_dssp             SSHHHHHHHHHHHHHHTCCCEECCHHHHHHHTC-SEEEEEECTTSCEEEEEECCCBCTTSCCCCSSSCCCBCCGGGCSCE
T ss_pred             CCHHHHHHHHHHHHHcCCeEeecCcccccccCc-eEEEEEECCCCCEEEEEECccccccCCCCCCCCccccccCCcccce
Confidence            8   8999999999999998766543   1233 3357899999999999986421                  135899


Q ss_pred             eeeeeCCchhhHHHHHHhcCCeeeeeccCc--cc-ceeeeeeccCCCCcceEEEEeEecCceeeccCceeeEEEEEecCh
Q 022831          157 VMLRVGDLGRSIKFYEKALGMKLLRTIDSP--EL-KCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAISTDDV  233 (291)
Q Consensus       157 v~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~--~~-~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~~hia~~v~di  233 (291)
                      +.|.|+|++++.+||+++|||++......+  ++ .....++..+..  +..+.+...      +..++.+|++|.|+|+
T Consensus       146 v~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~g~~~~~~~~~~~~~--~~~~~~~~~------~~~~~~~hiaf~v~d~  217 (292)
T 1kw3_B          146 FVRCVPDTAKAMAFYTEVLGFVLSDIIDIQMGPETSVPAHFLHCNGR--HHTIALAAF------PIPKRIHHFMLQANTI  217 (292)
T ss_dssp             EEEECSCHHHHHHHHHHTTCCEEEEEEEEEEETTEEEEEEEEESSSB--SCSEEEECC------SCSSSEEEEEEEBSSH
T ss_pred             EEEecCCHHHHHHHHHhccCCEEeeeeecccCCCccceEEEEEECCC--cceEEEecC------CCCCceEEEEEEcCCH
Confidence            999999999999999999999987543211  11 123344443322  223444321      1135789999999987


Q ss_pred             HHHHHHHHHHHHhhCCeeeecccccCCCCceEEEEECCCCC-eEEEEechhh
Q 022831          234 YKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGW-KTVLVDNEDF  284 (291)
Q Consensus       234 ~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~-~iel~~~~~~  284 (291)
                      +++.+.++.+ + +|+++..+|++++.+..+++||+||||| .|||++....
T Consensus       218 ~~v~~~~~~l-~-~G~~~~~~p~~~~~~~~~~~y~~DPdG~~~iEl~~~~~~  267 (292)
T 1kw3_B          218 DDVGYAFDRL-D-AAGRITSLLGRHTNDQTLSFYADTPSPMIEVEFGWGPRT  267 (292)
T ss_dssp             HHHHHHHHHH-H-HTTCBCBCSEEESSSCCEEEEEECSSTTCEEEEEECCCB
T ss_pred             HHHHHHHHHH-h-CCCceeecCcccCCCCeEEEEEECCCCCeeEEEEECCEE
Confidence            7654433221 8 9999998888776544667899999999 9999987643

>1lgt_A Biphenyl-2,3-DIOL 1,2-dioxygenase; extradiol dioxygenase, 2,3-dihydroxybiphenyl, non-heme iron, anaerobic, PCB biodegradation; HET: BP3; 1.70A {Burkholderia xenovorans} SCOP: d.32.1.3 d.32.1.3 PDB: 1kmy_A* 1knd_A 1knf_A 1han_A* 1lkd_A*

Probab=100.00  E-value=1.1e-31  Score=228.65  Aligned_cols=238  Identities=16%  Similarity=0.188  Sum_probs=173.8

Q ss_pred             ccceeeEEEEeCCHHHHHHHHHHhcCCEEEEEeccCCCceeeEEeeccCCCcceEEEeeecCCCCcccCCCCceEEEEEE
Q 022831           21 KRRLLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHLAIAT  100 (291)
Q Consensus        21 ~~~i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~g~~~~~i~~~v  100 (291)
                      +++|+||.|.|+|++++++||+++|||++..+..  .    ..++..+...  +.+.+...       ...+..|++|.|
T Consensus         2 i~~i~hv~l~v~Dl~~s~~FY~~~LG~~~~~~~~--~----~~~~~~~~~~--~~l~~~~~-------~~~~~~~~~f~v   66 (297)
T 1lgt_A            2 IRSLGYMGFAVSDVAAWRSFLTQKLGLMEAGTTD--N----GDLFRIDSRA--WRIAVQQG-------EVDDLAFAGYEV   66 (297)
T ss_dssp             EEEEEEEEEEESCHHHHHHHHHHTTCCEEEEEET--T----EEEEESSSBS--CSEEEEEC-------TTCEEEEEEEEE
T ss_pred             ceEEEEEEEEcCCHHHHHHHHHHccCCEEeecCC--C----eEEEEeCCCc--EEEEEecC-------CCCCccEEEEEe
Confidence            6789999999999999999999999999987532  1    3455543322  22333321       123678999999


Q ss_pred             C---CHHHHHHHHHHcCCeeeeCCccC---CCCceEEEEEECCCCcEEEEEecCCC------------------CCCcee
Q 022831          101 E---DVYKMVENIRAKGGNVTREPGPL---KGMTTHFAFVKDPDGYIFELIQRGPT------------------PEPLCQ  156 (291)
Q Consensus       101 ~---d~~~~~~~l~~~G~~~~~~~~~~---~~g~~~~~~~~dP~G~~iel~~~~~~------------------~~~~~h  156 (291)
                      +   |+++++++|+++|+++...+...   .++ ..+++|+||+|+.|+|++....                  +.++.|
T Consensus        67 ~~~~dl~~~~~~l~~~G~~~~~~~~~~~~~~~~-~~~~~~~DPdG~~iel~~~~~~~~~~~~~~~~~~~~~~~~~~~l~h  145 (297)
T 1lgt_A           67 ADAAGLAQMADKLKQAGIAVTTGDASLARRRGV-TGLITFADPFGLPLEIYYGASEVFEKPFLPGAAVSGFLTGEQGLGH  145 (297)
T ss_dssp             SSHHHHHHHHHHHHHTTCCCEECCHHHHHHHTC-SEEEEEECTTSCEEEEEECCCBCTTSCCCCSSSCSCBCCGGGCSCE
T ss_pred             CCHHHHHHHHHHHHHCCCeEEeCCccccccCCc-eeEEEEECCCCCEEEEEECccccccCCccCCCcccccccCccccce
Confidence            8   89999999999999987655421   122 3458899999999999986521                  136999


Q ss_pred             eeeeeCCchhhHHHHHHhcCCeeeeeccCc---ccceeeeeeccCCCCcceEEEEeEecCceeeccCceeeEEEEEecCh
Q 022831          157 VMLRVGDLGRSIKFYEKALGMKLLRTIDSP---ELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAISTDDV  233 (291)
Q Consensus       157 v~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~~hia~~v~di  233 (291)
                      +.|.|+|++++.+||+++|||++......+   +......++..+..  +..+.+...      +...+.+|++|.|+|+
T Consensus       146 v~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~l~l~~~------~~~~~~~hiaf~v~d~  217 (297)
T 1lgt_A          146 FVRCVPDSDKALAFYTDVLGFQLSDVIDMKMGPDVTVPAYFLHCNER--HHTLAIAAF------PLPKRIHHFMLEVASL  217 (297)
T ss_dssp             EEEECSCHHHHHHHHHHTTCCEEEEEEEEEEETTEEEEEEEEESSSB--SCSEEEECC------CCSSSEEEEEEEBSCH
T ss_pred             EEEecCCHHHHHHHHHHhcCCeeeeEEeccCCCCccceEEEEEeCCC--cceEEEEcC------CCCCCceEEEEeCCCH
Confidence            999999999999999999999987543211   10123344443222  233455431      1245789999999999


Q ss_pred             HHHHHHHHHHHHhhCCeeeecccccCCCCceEEEEECCCCCeEEEEechhh
Q 022831          234 YKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNEDF  284 (291)
Q Consensus       234 ~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~~~  284 (291)
                      +++.+..+ + +++|+++..+|.+++.+..+++||+|||||.|||++....
T Consensus       218 ~~~~~~~~-~-~~~G~~~~~~p~~~~~g~~~~~~~~DPdG~~iel~~~~~~  266 (297)
T 1lgt_A          218 DDVGFAFD-R-VDADGLITSTLGRHTNDHMVSFYASTPSGVEVEYGWSART  266 (297)
T ss_dssp             HHHHHHHH-H-HHTTTCEEEEEEEESSSCCEEEEEECTTSCEEEEEECCCB
T ss_pred             HHHHHHHH-H-HhCCCcccccCcccCCCCcEEEEEECCCCcEEEEecCCEE
Confidence            98886663 3 6889999998887765445678999999999999997643

>2ehz_A 1,2-dihydroxynaphthalene dioxygenase; extradiol dioxygenase, protein substrate complex, oxidoreduc; 1.35A {Pseudomonas SP} PDB: 2ei0_A* 2ei1_A* 2ei3_A* 2ei2_A

Probab=100.00  E-value=4.4e-32  Score=231.61  Aligned_cols=239  Identities=13%  Similarity=0.111  Sum_probs=169.8

Q ss_pred             cCCccceeeEEEEeCCHHHHHHHHHHhcCCEEEEEeccCCCceeeEEeeccCCCcceEEEeeecCCCCcccCCCCceEEE
Q 022831           18 KKDKRRLLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHLA   97 (291)
Q Consensus        18 ~~~~~~i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~g~~~~~i~   97 (291)
                      .|++++|+|+.|.|+|++++++||+++|||++..+..  .+   ..++..+.....  +.+....       ..+..|++
T Consensus         4 ~m~i~~i~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~~--~~---~~~~~~~~~~~~--l~l~~~~-------~~~~~~~~   69 (302)
T 2ehz_A            4 QAAVIELGYMGISVKDPDAWKSFATDMLGLQVLDEGE--KD---RFYLRMDYWHHR--IVVHHNG-------QDDLEYLG   69 (302)
T ss_dssp             CCCEEEEEEEEEECSCHHHHHHHHHHTTCCEEECCSC--SS---EEEEESSSBSCS--EEEESSC-------CSEEEEEE
T ss_pred             cccccEeeEEEEEeCCHHHHHHHHHhcCCCEEEeccC--Cc---ceEEEeCCCceE--EEEecCC-------CCCeeEEE
Confidence            4778999999999999999999999999999975321  11   345544322222  3333211       23678999


Q ss_pred             EEEC---CHHHHHHHHHHcCCeeeeCCccCC--CCceEEEEEECCCCcEEEEEecCC----C--------C-------CC
Q 022831           98 IATE---DVYKMVENIRAKGGNVTREPGPLK--GMTTHFAFVKDPDGYIFELIQRGP----T--------P-------EP  153 (291)
Q Consensus        98 ~~v~---d~~~~~~~l~~~G~~~~~~~~~~~--~g~~~~~~~~dP~G~~iel~~~~~----~--------~-------~~  153 (291)
                      |.|+   |+++++++|+++|+++...+...+  .+....++|+||+|+.|||++...    .        +       .+
T Consensus        70 ~~v~~~~dl~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~~~~~~~~~~~~~~~~~~~~~~~~~~  149 (302)
T 2ehz_A           70 WRVAGKPEFEALGQKLIDAGYKIRICDKVEAQERMVLGLMKTEDPGGNPTEIFWGPRIDMSNPFHPGRPLHGKFVTGDQG  149 (302)
T ss_dssp             EEESSHHHHHHHHHHHHHTTCCCEECCHHHHHHHTEEEEEEEECTTSCEEEEEEEECBCTTSCCCCSSCCSSCBCCGGGC
T ss_pred             EEECCHHHHHHHHHHHHHCCCcEEECCccccccccceEEEEEECCCCCEEEEEECCCccCCCCccCCCCcccceecCCCc
Confidence            9995   699999999999999876654322  122345889999999999997521    1        1       17


Q ss_pred             ceeeeeeeCCchhhHHHHHHhcCCeeeeeccCc--cc-ceeeeeeccCCCCcceEEEEeEecCceeeccCceeeEEEEEe
Q 022831          154 LCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSP--EL-KCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAIST  230 (291)
Q Consensus       154 ~~hv~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~--~~-~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~~hia~~v  230 (291)
                      +.|+.|.|+|++++.+|| ++|||++......+  ++ .....++..++.  ...+.+...      +..++++|++|.|
T Consensus       150 l~hv~l~v~D~~~a~~FY-~~lG~~~~~~~~~~~~~g~~~~~~~~~~~~~--~~~~~~~~~------~~~~~~~hiaf~v  220 (302)
T 2ehz_A          150 LGHCIVRQTDVAEAHKFY-SLLGFRGDVEYRIPLPNGMTAELSFMHCNAR--DHSIAFGAM------PAAKRLNHLMLEY  220 (302)
T ss_dssp             SCEEEECCSCHHHHHHHH-HHTTCBCCEEEEEECTTSCEEEEEEEBSSSB--SCSEEECSC------CCSSSEEEEEEEE
T ss_pred             cceEEEEcCCHHHHHHHH-HhcCCeeeeEEeccCCCCcceEEEEEEeCCC--CcEEEEecC------CCCCceeEEEEEc
Confidence            899999999999999999 99999986542211  11 123344443322  223444321      1135789999999


Q ss_pred             cChHHH---HHHHHHHHHhhCCeeeecccccCCCCceEEEEECCCCCeEEEEechh
Q 022831          231 DDVYKS---AEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNED  283 (291)
Q Consensus       231 ~di~~~---~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~~  283 (291)
                      +|++++   ++++    +++|+++..+|.+++.++.+++||+|||||.|||+....
T Consensus       221 ~d~~~v~~~~~~l----~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iEl~~~~~  272 (302)
T 2ehz_A          221 THMEDLGYTHQQF----VKNEIDIALQLGIHANDKALTFYGATPSGWLIEPGWRGA  272 (302)
T ss_dssp             SSHHHHHHHHHHH----HHTTCCEEEEEEECTTTCCEEEEEECTTSSEEEEEECCC
T ss_pred             CCHHHHHHHHHHH----HHCCCcEEeCCcccCCCCceEEEEECCCCcEEEEEECce
Confidence            987764   4566    999999998888776555678999999999999998643

>2r5v_A PCZA361.1; dioxygenase, non-heme iron, vancomycin, oxidoreductase; HET: HHH; 2.30A {Amycolatopsis orientalis}

Probab=99.97  E-value=2.2e-29  Score=219.74  Aligned_cols=252  Identities=18%  Similarity=0.221  Sum_probs=179.3

Q ss_pred             CCccceeeEEEEeCCHHHHHHHHHHhcCCEEEEEeccCCCceeeEEeeccCCCcceEEEeeecCCCCc------ccCCCC
Q 022831           19 KDKRRLLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTS------YDIGTG   92 (291)
Q Consensus        19 ~~~~~i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~------~~~g~~   92 (291)
                      |.+++|+||.+.|+|++++.+||+++|||+++.+....++  ....+..+  .  ..+.+..+.....      ...|.+
T Consensus         1 ~~i~~l~hv~~~v~D~~~a~~fy~~~LGf~~~~~~~~~~g--~~~~~~~g--~--~~l~l~~~~~~~~~~~~~~~~~g~g   74 (357)
T 2r5v_A            1 MQNFEIDYVEMYVENLEVAAFSWVDKYAFAVAGTSRSADH--RSIALRQG--Q--VTLVLTEPTSDRHPAAAYLQTHGDG   74 (357)
T ss_dssp             -CCCEEEEEEEECSCHHHHHHHHHHHHCCEEEEEEEETTE--EEEEEEET--T--EEEEEEEESSTTSHHHHHHHHHSSE
T ss_pred             CCCceEEEEEEEECCHHHHHHHHHHcCCCeEEEEEcCCCc--eEEEEEeC--C--EEEEEeCCCCCCCHHHHHHHhcCCe
Confidence            5789999999999999999999999999999876543333  23334332  2  3355544211111      124568


Q ss_pred             ceEEEEEECCHHHHHHHHHHcCCeeeeCCccCCCCceEEEEEECCCCcEEEEEecCC-------------------C---
Q 022831           93 FGHLAIATEDVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFELIQRGP-------------------T---  150 (291)
Q Consensus        93 ~~~i~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dP~G~~iel~~~~~-------------------~---  150 (291)
                      +.+++|.|+|+++++++++++|+++..+|....+|....+.+++|+|..++|++...                   .   
T Consensus        75 ~~~iaf~V~D~~~~~~~l~~~G~~~~~~p~~~~~g~~~~~~~~~p~g~~~~lv~~~~~~~~f~p~~~~~~~~~~~~~~~~  154 (357)
T 2r5v_A           75 VADIAMATSDVAAAYEAAVRAGAEAVRAPGQHSEAAVTTATIGGFGDVVHTLIQRDGTSAELPPGFTGSMDVTNHGKGDV  154 (357)
T ss_dssp             EEEEEEEESCHHHHHHHHHHTTCCEEEEEECCC-CCCCEEEEECSTTCEEEEEECCSSSCCCCTTCEECSCCCCTTCTTC
T ss_pred             EEEEEEEECCHHHHHHHHHHcCCeEeECcEecCCCeEEEEEEeccCCeEEEEEecccCCCCCCCCCcccCcccccCCCCC
Confidence            999999999999999999999999887665433444445789999999999988631                   0   


Q ss_pred             -CCCceeeeeeeC--CchhhHHHHHHhcCCeeeeecc--CcccceeeeeeccCCCCcceEEEEeEecCc--ee-------
Q 022831          151 -PEPLCQVMLRVG--DLGRSIKFYEKALGMKLLRTID--SPELKCALAMLGYAEEDQTTVLELAYSYGV--TE-------  216 (291)
Q Consensus       151 -~~~~~hv~l~v~--D~~~~~~Fy~~~lG~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~--~~-------  216 (291)
                       ..+++|+++.|+  |++++.+||+++|||++....+  .+.......++..++  ....|++......  ..       
T Consensus       155 ~~~~l~Hv~l~V~~~D~~~~~~FY~~vLGf~~~~~~~~~~~~~~~~~~~l~~~~--g~~~l~l~~~~~~~~~~~~~~~~~  232 (357)
T 2r5v_A          155 DLLGIDHFAICLNAGDLGPTVEYYERALGFRQIFDEHIVVGAQAMNSTVVQSAS--GAVTLTLIEPDRNADPGQIDEFLK  232 (357)
T ss_dssp             CCCEEEEEEEECCTTCHHHHHHHHHHHHCCEEEEEEEEEETTEEEEEEEEECTT--SCCEEEEEEECTTSBCCHHHHHHH
T ss_pred             CcceEeEEEEEEchhhHHHHHHHHHHhcCCcEEEEEeeccCCcceEEEEEECCC--CCEEEEEeeecCCCCCchhHHHHH
Confidence             123899999999  9999999999999999875432  122223444555332  2456777654321  11       


Q ss_pred             eccCceeeEEEEEecChHHHHHHHHHHHHhhCCeeeeccccc--------CCCC--------ceEEEEECCCCCeEEEEe
Q 022831          217 YTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPI--------PGLN--------TKITSFVDPDGWKTVLVD  280 (291)
Q Consensus       217 ~~~~~g~~hia~~v~di~~~~~~l~~~~~~~G~~~~~~p~~~--------~~~~--------~~~~~~~DPdG~~iel~~  280 (291)
                      ...++|++||+|.|+|+++++++|    +++|+++...|...        ...+        ..++|++||||++|||++
T Consensus       233 ~~~~~g~~Hiaf~v~Di~~~~~~L----~~~Gv~~~~~p~~yy~~~~~r~~~~~~~~~~~~~~~~l~~~Dp~G~llqi~t  308 (357)
T 2r5v_A          233 DHQGAGVQHIAFNSNDAVRAVKAL----SERGVEFLKTPGAYYDLLGERITLQTHSLDDLRATNVLADEDHGGQLFQIFT  308 (357)
T ss_dssp             HHTSSEEEEEEEECSCHHHHHHHH----HHTTCCBCCCCHHHHHTTTTTCCCSSSCHHHHHHHTCEEEEETTEEEEEEEB
T ss_pred             hcCCCCccEEEEEcCCHHHHHHHH----HHcCCCcCCCchhHHHHHHHhhccchhhHHHHHHcCeEEecCCCceEEEEEc
Confidence            113579999999999999999999    99999988876321        0000        137999999999999998


Q ss_pred             ch
Q 022831          281 NE  282 (291)
Q Consensus       281 ~~  282 (291)
                      .+
T Consensus       309 ~~  310 (357)
T 2r5v_A          309 AS  310 (357)
T ss_dssp             CC
T ss_pred             cC
Confidence            53

>1t47_A 4-hydroxyphenylpyruvate dioxygenase; triketone inhibitor, iron, oxidoreductase; HET: NTD; 2.50A {Streptomyces avermitilis} SCOP: d.32.1.3 d.32.1.3

Probab=99.96  E-value=1.7e-27  Score=209.16  Aligned_cols=255  Identities=18%  Similarity=0.226  Sum_probs=179.8

Q ss_pred             cCCccceeeEEEEeCCHHHHHHHHHHhcCCEEEEEeccCCC--ceeeEEeeccCCCcceEEEeeecCCCCc---------
Q 022831           18 KKDKRRLLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEE--KYSNAFLGFGPEQSYFVVELTYNYGVTS---------   86 (291)
Q Consensus        18 ~~~~~~i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~l~~~~~~~~---------   86 (291)
                      .|.+++|+||.|.|+|++++.+||+++|||++..+.....+  ......+..+    .+.+++..+.....         
T Consensus        17 ~~~i~~i~hV~i~V~D~~~a~~FY~~~LGf~~~~~~~~~~~~~~~~~~~~~~g----~~~l~l~~~~~~~~~~~~~~~~~   92 (381)
T 1t47_A           17 PFPVKGMDAVVFAVGNAKQAAHYYSTAFGMQLVAYSGPENGSRETASYVLTNG----SARFVLTSVIKPATPWGHFLADH   92 (381)
T ss_dssp             CSCCCEEEEEEEECSCHHHHHHHHHHTSCCEEEEEESGGGTCCSEEEEEEEET----TEEEEEEEESSCCSHHHHHHHHH
T ss_pred             CCcCceEEEEEEEECCHHHHHHHHHHcCCCEEEEEEcCCCCCceEEEEEEecC----CEEEEEecCCCCCCcchhHHHHH
Confidence            37899999999999999999999999999999876432222  2234444432    24455555321111         


Q ss_pred             -ccCCCCceEEEEEECCHHHHHHHHHHcCCeeeeCCccCC--CCceEEEEEECCCCcEEEEEecC-------C------C
Q 022831           87 -YDIGTGFGHLAIATEDVYKMVENIRAKGGNVTREPGPLK--GMTTHFAFVKDPDGYIFELIQRG-------P------T  150 (291)
Q Consensus        87 -~~~g~~~~~i~~~v~d~~~~~~~l~~~G~~~~~~~~~~~--~g~~~~~~~~dP~G~~iel~~~~-------~------~  150 (291)
                       ...|.++.|++|+|+|+++++++++++|+++..+|....  .|...++.+++|+|+.++|++..       +      .
T Consensus        93 ~~~~g~gv~~iaf~V~D~~~~~~~l~~~G~~~~~~p~~~~~~~g~~~~~~~~~pgg~~~~lv~~~~~~~~f~p~~~~~~~  172 (381)
T 1t47_A           93 VAEHGDGVVDLAIEVPDARAAHAYAIEHGARSVAEPYELKDEHGTVVLAAIATYGKTRHTLVDRTGYDGPYLPGYVAAAP  172 (381)
T ss_dssp             HHHHCSEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEEEETTEEEEEEEEECSTTCEEEEEEEEEECSSSSTTCEECCC
T ss_pred             HHhcCCceEEEEEEECCHHHHHHHHHHcCCEEeeccccccCCCCeEEEEEEecCCCcEEEEEecCCCCCCCCCCCccccc
Confidence             123668999999999999999999999999887765432  23334677899999999999752       0      0


Q ss_pred             ---------CCCceeeeeeeC--CchhhHHHHHHhcCCeeeeecc-----CcccceeeeeeccCCCCcceEEEEeEec--
Q 022831          151 ---------PEPLCQVMLRVG--DLGRSIKFYEKALGMKLLRTID-----SPELKCALAMLGYAEEDQTTVLELAYSY--  212 (291)
Q Consensus       151 ---------~~~~~hv~l~v~--D~~~~~~Fy~~~lG~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~l~l~~~~--  212 (291)
                               ..+|+|+++.|+  |++++.+||+++|||++....+     .+.......++..+  .....|+|....  
T Consensus       173 ~~~~~~~~~~~~idHv~l~V~~~dl~~a~~FY~~vLGf~~~~~~~~~~i~~~~~~~~~~~l~~~--~g~v~i~l~~~~~~  250 (381)
T 1t47_A          173 IVEPPAHRTFQAIDHCVGNVELGRMNEWVGFYNKVMGFTNMKEFVGDDIATEYSALMSKVVADG--TLKVKFPINEPALA  250 (381)
T ss_dssp             SSCCCSSCSCCEEEEEEEECCTTCHHHHHHHHHHHHCCEECSCCBCHHHHTTTTSEEEEEEECT--TSCSEEEEEEECCS
T ss_pred             cccCCCCCCceEEeEEEEeeccccHHHHHHHHHHhhCCEEeeecCcceeccCCccEEEEEEECC--CCcEEEEEecCCcC
Confidence                     124899999999  9999999999999999876632     12222334444422  223556665543  


Q ss_pred             Ccee-------eccCceeeEEEEEecChHHHHHHHHHHHHhhCCeeeecccccCC--------CC--------ceEEEEE
Q 022831          213 GVTE-------YTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPG--------LN--------TKITSFV  269 (291)
Q Consensus       213 ~~~~-------~~~~~g~~hia~~v~di~~~~~~l~~~~~~~G~~~~~~p~~~~~--------~~--------~~~~~~~  269 (291)
                      ...+       ...+.|++||||.|+|+++++++|    +++|+++...|...-.        .+        ..+.+-+
T Consensus       251 ~~~s~~~~~l~~~~g~Gv~HiAf~vdDi~~~~~~L----~~~Gv~~~~~p~~Yy~~l~~R~~~~~~~~~~l~~~~il~d~  326 (381)
T 1t47_A          251 KKKSQIDEYLEFYGGAGVQHIALNTGDIVETVRTM----RAAGVQFLDTPDSYYDTLGEWVGDTRVPVDTLRELKILADR  326 (381)
T ss_dssp             SSCCHHHHHHHHHTSCEEEEEEEECSCHHHHHHHH----HHTTCCBCCCCGGGTTSHHHHHCCCSSCHHHHHHHTCEEEE
T ss_pred             CCccHHHHHHHHhCCCCcceEEEecCCHHHHHHHH----HHcCCccCCCCccHHHHHHHhccccchhHHHHHHhCeEEee
Confidence            1111       124679999999999999999999    9999999887643110        00        1246678


Q ss_pred             CCCCCeEEEEech
Q 022831          270 DPDGWKTVLVDNE  282 (291)
Q Consensus       270 DPdG~~iel~~~~  282 (291)
                      ||+|.++++++.+
T Consensus       327 d~~g~llqift~~  339 (381)
T 1t47_A          327 DEDGYLLQIFTKP  339 (381)
T ss_dssp             CSSCEEEEEEBCC
T ss_pred             CCCCeEEEEeccC
Confidence            9999888887643

>1sqd_A 4-hydroxyphenylpyruvate dioxygenase; oxidoreductase; 1.80A {Arabidopsis thaliana} SCOP: d.32.1.3 d.32.1.3 PDB: 1tfz_A* 1tg5_A* 1sp9_A

Probab=99.95  E-value=6.5e-26  Score=200.71  Aligned_cols=227  Identities=18%  Similarity=0.231  Sum_probs=160.7

Q ss_pred             cCCccceeeEEEEeCCHHHHHHHHHHhcCCEEEEEeccCCC--ceeeEEeeccCCCcceEEEeeecCCCC----------
Q 022831           18 KKDKRRLLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEE--KYSNAFLGFGPEQSYFVVELTYNYGVT----------   85 (291)
Q Consensus        18 ~~~~~~i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~l~~~~~~~----------   85 (291)
                      .|.+++|+||.|.|+|++++.+||+++|||+++.+...+.+  .+..++++.+    .+.+.|..+....          
T Consensus        20 ~~~i~~i~HV~i~V~Dle~a~~FY~~~LGf~~v~~~~~~~g~~~~~~~~l~~g----~~~l~L~~~~~~~~~~~~~~~~~   95 (424)
T 1sqd_A           20 KFKVKRFHHIEFWCGDATNVARRFSWGLGMRFSAKSDLSTGNMVHASYLLTSG----DLRFLFTAPYSPSLSAGEIKPTT   95 (424)
T ss_dssp             SSCEEEEEEEEEECSCHHHHHHHHHHHHTCEEEEEESGGGTCSSEEEEEEEET----TEEEEEEEECCGGGTTTCCGGGC
T ss_pred             cccCCeEEEEEEEECCHHHHHHHHHHcCCCEEEEEEcCCCCceeEEEEEEcCC----CEEEEEecCCCCccccccccccc
Confidence            35678999999999999999999999999999876543322  3334445432    2345555432111          


Q ss_pred             ---------c------ccCCCCceEEEEEECCHHHHHHHHHHcCCeeeeCCccCCCCceEEEEEECCCCcEEEEEecCCC
Q 022831           86 ---------S------YDIGTGFGHLAIATEDVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFELIQRGPT  150 (291)
Q Consensus        86 ---------~------~~~g~~~~~i~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dP~G~~iel~~~~~~  150 (291)
                               .      ...|.|+.||+|+|+|+++++++++++|+++..+|....++ ...+.+++|+|..++|++....
T Consensus        96 ~~p~~~~~~~~~~~~~~~~g~gv~~iAf~VdDvdaa~~~l~a~Ga~~~~~P~~~~~~-~~~~~i~~~Gg~~~~lvd~~g~  174 (424)
T 1sqd_A           96 TASIPSFDHGSCRSFFSSHGLGVRAVAIEVEDAESAFSISVANGAIPSSPPIVLNEA-VTIAEVKLYGDVVLRYVSYKAE  174 (424)
T ss_dssp             CCSSTTCCHHHHHHHHHHHCSEEEEEEEEESCHHHHHHHHHHTTCCEEEEEEEETTT-EEEEEEEEETTEEEEEEEECCC
T ss_pred             ccccccccchHHHHHHHhcCCeEEEEEEEeCCHHHHHHHHHHcCCEEeecCcCCCCc-eEEEEEEcCCCcEEEEEecCCC
Confidence                     0      12346899999999999999999999999988777654332 3446677788888877764311


Q ss_pred             -------------------------CCCceeeeeeeCCchhhHHHHHHhcCCeeeeeccCcc-----cceeeeeeccCCC
Q 022831          151 -------------------------PEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPE-----LKCALAMLGYAEE  200 (291)
Q Consensus       151 -------------------------~~~~~hv~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~-----~~~~~~~~~~~~~  200 (291)
                                               ..+|+|+++.|+|++++.+||+++|||++....+.++     .++...++..+  
T Consensus       175 ~~~~~~f~p~~~~~~~~~~~~~~~~~~~idHv~i~V~dl~~a~~FY~~~LGf~~~~~~~~~d~~~~~~gl~s~~l~~~--  252 (424)
T 1sqd_A          175 DTEKSEFLPGFERVEDASSFPLDYGIRRLDHAVGNVPELGPALTYVAGFTGFHQFAEFTADDVGTAESGLNSAVLASN--  252 (424)
T ss_dssp             ------CCTTCEECCTTTCCCCCSSEEEEEEEEEECSCHHHHHHHHHHHHCCEEEEEEC--------CCEEEEEEECT--
T ss_pred             CCCccccCCCcccccccccCCCcCCcceEeeEEEeeCCHHHHHHHHHHhhCCeEEEEEcccccccccccceEEEEEcC--
Confidence                                     1248999999999999999999999999887754322     12344444432  


Q ss_pred             CcceEEEEeEecC---cee-------eccCceeeEEEEEecChHHHHHHHHHHHHh----hCCeeeecc
Q 022831          201 DQTTVLELAYSYG---VTE-------YTKGNAYAQVAISTDDVYKSAEVVNLVTQE----LGGKITRQP  255 (291)
Q Consensus       201 ~~~~~l~l~~~~~---~~~-------~~~~~g~~hia~~v~di~~~~~~l~~~~~~----~G~~~~~~p  255 (291)
                      .....|+|.....   ..+       ...|.|++||||.|+|+.++++++    ++    +|+++...|
T Consensus       253 ~g~~~l~l~e~~~~~~~~s~i~~fl~~~~G~G~~HIAf~vdDI~~a~~~L----~~r~~~~Gv~~l~~p  317 (424)
T 1sqd_A          253 DEMVLLPINEPVHGTKRKSQIQTYLEHNEGAGLQHLALMSEDIFRTLREM----RKRSSIGGFDFMPSP  317 (424)
T ss_dssp             TSCSEEEEEEECCC---CCHHHHHHHHHTSCEEEEEEEEESCHHHHHHHH----HHHGGGTSCCBCCCC
T ss_pred             CCcEEEEEecccccCCCcchhhhhhhhcCCCCcCEEEEEeCCHHHHHHHH----HhhhccCCcEEecCC
Confidence            2346677766531   111       135779999999999999999999    77    899998875

>3isq_A 4-hydroxyphenylpyruvate dioxygenase; tyrosine metabolism, DIS mutation, iron, mental retardation, metal-binding, oxidored phenylalanine catabolism; 1.75A {Homo sapiens} PDB: 1sqi_A*

Probab=99.94  E-value=2.3e-25  Score=194.17  Aligned_cols=229  Identities=17%  Similarity=0.269  Sum_probs=168.4

Q ss_pred             CcCCccceeeEEEEeCCHHHHHHHHHHhcCCEEEEEeccCCCce--eeEEeeccCCCcceEEEeeecCCCCc-------c
Q 022831           17 PKKDKRRLLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKY--SNAFLGFGPEQSYFVVELTYNYGVTS-------Y   87 (291)
Q Consensus        17 ~~~~~~~i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~l~~~~~~~~-------~   87 (291)
                      +.+.+++|+||.|.|+|++++.+||++.|||++......+.+..  ....+..+    ...+++..+..+..       .
T Consensus         5 ~~~~i~~i~Hv~i~V~d~~~a~~fY~~~LGf~~v~~~~~e~g~r~~~~~~l~~G----~i~~~L~~p~~p~s~~~a~fl~   80 (393)
T 3isq_A            5 ERGRFLHFHSVTFWVGNAKQAASFYCSKMGFEPLAYRGLETGSREVVSHVIKQG----KIVFVLSSALNPWNKEMGDHLV   80 (393)
T ss_dssp             SSCEEEEEEEEEEECSCHHHHHHHHHHHHCCEEEEEESGGGTCCSEEEEEEEET----TEEEEEEEESSTTCHHHHHHHH
T ss_pred             CCCCCceEeEEEEEECCHHHHHHHHHHhcCCEEEEEEcCCCCcEEEEEEEEecC----CEEEEEecCCCCCchHHHHHHH
Confidence            44678999999999999999999999999999988655433322  23344432    24455554322211       1


Q ss_pred             cCCCCceEEEEEECCHHHHHHHHHHcCCeeeeCCccCCC--CceEEEEEECCCCcEEEEEecCC-----------C----
Q 022831           88 DIGTGFGHLAIATEDVYKMVENIRAKGGNVTREPGPLKG--MTTHFAFVKDPDGYIFELIQRGP-----------T----  150 (291)
Q Consensus        88 ~~g~~~~~i~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~--g~~~~~~~~dP~G~~iel~~~~~-----------~----  150 (291)
                      ..|.|++||+|+|+|+++++++++++|+++..+|....+  |...++.+++|.|..+.|++...           .    
T Consensus        81 ~hG~Gv~~iAf~VdDvdaa~~ra~a~Ga~~v~eP~~~~~~~G~v~~a~I~~~Gd~~h~lVdr~~y~~~flpg~~~~~~~~  160 (393)
T 3isq_A           81 KHGDGVKDIAFEVEDCDYIVQKARERGAKIMREPWVEQDKFGKVKFAVLQTYGDTTHTLVEKMNYIGQFLPGYEAPAFMD  160 (393)
T ss_dssp             HHCSEEEEEEEEEECHHHHHHHHHHHTCCEEEEEEEEEETTEEEEEEEEECSTTCEEEEEEEESCCSSSCTTCBSCSCCC
T ss_pred             hcCCcEEEEEEEeCCHHHHHHHHHHCCCeEecCccccccCCceeEEEEEEeCCCcEEEEeccccCcCCCCCCcccccccc
Confidence            256789999999999999999999999999888765543  33456778999999999988521           0    


Q ss_pred             ------C----CCceeeeeeeCC--chhhHHHHHHhcCCeeeeecc-----CcccceeeeeeccCCCCcceEEEEeEecC
Q 022831          151 ------P----EPLCQVMLRVGD--LGRSIKFYEKALGMKLLRTID-----SPELKCALAMLGYAEEDQTTVLELAYSYG  213 (291)
Q Consensus       151 ------~----~~~~hv~l~v~D--~~~~~~Fy~~~lG~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~l~l~~~~~  213 (291)
                            +    .+|+|+++.|+|  ++++.+||+++|||+.....+     .+..+....++..+  .....|+|..+..
T Consensus       161 ~~~~~~~~~~l~~IDHv~i~V~~~~l~~a~~fY~~~lGf~~~~~~d~~~i~~~~~gl~s~~~~~~--~g~v~i~L~ep~~  238 (393)
T 3isq_A          161 PLLPKLPKCSLEMIDHIVGNQPDQEMVSASEWYLKNLQFHRFWSVDDTQVHTEYSSLRSIVVANY--EESIKMPINEPAP  238 (393)
T ss_dssp             TTGGGSCCCCEEEEEEEEEECCTTCHHHHHHHHHHHHCCEEEEEECTTTSBCSSCEEEEEEEECT--TSSCEEEEEEEEC
T ss_pred             ccccCCCCCCeeEEeEEEEecCccHHHHHHHHHHHHhCCEEeccccccccccCCCcEEEEEEECC--CCCEEEEEecCCC
Confidence                  1    238999999998  999999999999999876533     12223444455433  2356777776543


Q ss_pred             --cee-------eccCceeeEEEEEecChHHHHHHHHHHHHhhCCeeeecc
Q 022831          214 --VTE-------YTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQP  255 (291)
Q Consensus       214 --~~~-------~~~~~g~~hia~~v~di~~~~~~l~~~~~~~G~~~~~~p  255 (291)
                        ..+       ...|.|++||||.|+||.+++++|    ++.|+++...|
T Consensus       239 ~~~~s~I~~fL~~~~G~Gi~HiA~~~dDi~~~~~~l----~~~Gv~~l~~P  285 (393)
T 3isq_A          239 GKKKSQIQEYVDYNGGAGVQHIALKTEDIITAIRHL----RERGLEFLSVP  285 (393)
T ss_dssp             CSBCCHHHHHHHHHTSSEEEEEEEEESCHHHHHHHH----HHTTCCBCCCC
T ss_pred             CCCCCHHHHHHHHcCCCCcceEEEEcCCHHHHHHHH----HHcCCccCCCC
Confidence              111       124789999999999999999999    99999998876

>1cjx_A 4-hydroxyphenylpyruvate dioxygenase; oxidoreductase, iron; 2.40A {Pseudomonas fluorescens} SCOP: d.32.1.3 d.32.1.3

Probab=99.93  E-value=2.2e-25  Score=194.24  Aligned_cols=250  Identities=15%  Similarity=0.123  Sum_probs=170.8

Q ss_pred             hccCCcCCccceeeEEEEeCCHHHHHHHHHHhcCCEEEEEeccCCCceeeEEeeccCCCcceEEEeeecCCCCc----cc
Q 022831           13 LLEWPKKDKRRLLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTS----YD   88 (291)
Q Consensus        13 ~~~~~~~~~~~i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~----~~   88 (291)
                      +..++ |.+++++||.+.|+|++++.+|| +.|||+++.+....    ....+..+  .  ..+.+........    ..
T Consensus         3 ~~~~~-~~i~~l~hV~~~V~D~~~~~~fy-~~LGf~~~~~~~~~----~~~l~~~g--~--~~l~l~~~~~~~~~~~~~~   72 (357)
T 1cjx_A            3 LYENP-MGLMGFEFIEFASPTPGTLEPIF-EIMGFTKVATHRSK----NVHLYRQG--E--INLILNNEPNSIASYFAAE   72 (357)
T ss_dssp             -CCCT-TCEEEEEEEEEECSSTTSSHHHH-HHTTCEEEEEESSS----SEEEEEET--T--EEEEEECCSSSHHHHHHHH
T ss_pred             cccCC-cccceEEEEEEEeCCHHHHHHHH-HHCCCEEEEEeCCe----eEEEEecC--C--EEEEEECCCCchhhhhhhh
Confidence            44444 88999999999999999999999 78999998764321    13334432  2  3344443222110    12


Q ss_pred             CCCCceEEEEEECCHHHHHHHHHHcCCeeeeCCccCCCCceEEEEEECCCCcEEEEEecCCC------------------
Q 022831           89 IGTGFGHLAIATEDVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFELIQRGPT------------------  150 (291)
Q Consensus        89 ~g~~~~~i~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dP~G~~iel~~~~~~------------------  150 (291)
                      .|.++.+++|+|+|+++++++++++|+++...+..  .|....+.+++|+|..++|++....                  
T Consensus        73 ~g~gv~~iaf~V~D~~~~~~~l~~~G~~~~~~~~~--~g~~~~~~~~~~gg~~~~~vd~~~~~~~~~~~~f~~~~~~~~~  150 (357)
T 1cjx_A           73 HGPSVCGMAFRVKDSQKAYNRALELGAQPIHIDTG--PMELNLPAIKGIGGAPLYLIDRFGEGSSIYDIDFVYLEGVERN  150 (357)
T ss_dssp             HSSEEEEEEEEESCHHHHHHHHHHTTCCBCCCCCC--TTCBCCCEEECGGGCEEEEECCCSSSCCHHHHHEEECTTCCSS
T ss_pred             cCCeEEEEEEEeCCHHHHHHHHHHcCCEEeecCCC--CCcEEEEeeeCCCCeEEEEECCCCCCCCcCCCCcccCCccccC
Confidence            45789999999999999999999999997665532  2332335678888888888765311                  


Q ss_pred             C-----CCceeeeeeeC--CchhhHHHHHHhcCCeeeeeccCcc--cce--eeeeeccCCCCcceEEEEeEe-cCcee--
Q 022831          151 P-----EPLCQVMLRVG--DLGRSIKFYEKALGMKLLRTIDSPE--LKC--ALAMLGYAEEDQTTVLELAYS-YGVTE--  216 (291)
Q Consensus       151 ~-----~~~~hv~l~v~--D~~~~~~Fy~~~lG~~~~~~~~~~~--~~~--~~~~~~~~~~~~~~~l~l~~~-~~~~~--  216 (291)
                      +     .+|+|+++.|+  |++++.+||+++|||++....+.++  ...  ...+...    ....|+|... .....  
T Consensus       151 ~~~~~i~~idHv~l~V~~~dl~~a~~FY~~vLGf~~~~~~~~~~~~~~~~~~~~~~~~----g~~~i~L~~~~~~~~~~~  226 (357)
T 1cjx_A          151 PVGAGLKVIDHLTHNVYRGRMVYWANFYEKLFNFREARYFDIKGEYTGLTSKAMSAPD----GMIRIPLNEESSKGAGQI  226 (357)
T ss_dssp             CCTTSEEEEEEECEECCTTHHHHHHHHHHHHHCCEEEEEEEEECSSCEEEEEEEECTT----SSCEEEEEEECTTCCSHH
T ss_pred             CCCCCeeEECceEEeechhhHHHHHHHHHHhhCCceeeEEEeccCCcceEEEEEECCC----CCEEEEEeeecCCCCChH
Confidence            1     23889999999  9999999999999999876543211  111  2233332    2356777654 22111  


Q ss_pred             -----eccCceeeEEEEEecChHHHHHHHHHHHHhhCCeeee-ccc--------ccCCCCc--------eEEEEEC----
Q 022831          217 -----YTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITR-QPG--------PIPGLNT--------KITSFVD----  270 (291)
Q Consensus       217 -----~~~~~g~~hia~~v~di~~~~~~l~~~~~~~G~~~~~-~p~--------~~~~~~~--------~~~~~~D----  270 (291)
                           ...+.|++|+||.|+|+++++++|    +++|+++.. .|.        +....+.        .+.+-+|    
T Consensus       227 ~~~~~~~~g~g~~HiAf~v~Di~~~~~~L----~~~Gv~~~~~~p~~Yy~~l~~r~~~~~~~~~~l~~~~il~d~d~~~~  302 (357)
T 1cjx_A          227 EEFLMQFNGEGIQHVAFLTDDLVKTWDAL----KKIGMRFMTAPPDTYYEMLEGRLPDHGEPVDQLQARGILLDGSSVEG  302 (357)
T ss_dssp             HHHHHHHTSSBCCEEEEEESCHHHHHHHH----HHTTCCBCCCCCHHHHHTHHHHSTTCCCCHHHHHHHTCEEEEEEETT
T ss_pred             HHhHHhcCCCCeeEEEEEcCCHHHHHHHH----HHcCCcccCCCChHHHHHHHHHhccccccHHHHHHcCeEEecCCCCC
Confidence                 124678999999999999999999    999999887 551        1111111        1466688    


Q ss_pred             CCCCeEEEEech
Q 022831          271 PDGWKTVLVDNE  282 (291)
Q Consensus       271 PdG~~iel~~~~  282 (291)
                      |+|++++|++.+
T Consensus       303 ~~g~llqift~~  314 (357)
T 1cjx_A          303 DKRLLLQIFSET  314 (357)
T ss_dssp             EEEEEEEEEBCC
T ss_pred             CCCeEEEEeccC
Confidence            889999888754

>1sp8_A 4-hydroxyphenylpyruvate dioxygenase; oxidoreductase; 2.00A {Zea mays} SCOP: d.32.1.3 d.32.1.3

Probab=99.93  E-value=1.5e-24  Score=191.60  Aligned_cols=227  Identities=15%  Similarity=0.165  Sum_probs=160.7

Q ss_pred             cCCccceeeEEEEeCCHHHHHHHHHHhcCCEEEEEeccCCC--ceeeEEeeccCCCcceEEEeeecCCCC----------
Q 022831           18 KKDKRRLLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEE--KYSNAFLGFGPEQSYFVVELTYNYGVT----------   85 (291)
Q Consensus        18 ~~~~~~i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~l~~~~~~~----------   85 (291)
                      .+.+++|+||.|.|+|++++.+||++.|||++..+...+.+  ....+++..+  .  ..++|.......          
T Consensus        26 ~~~i~~l~hV~i~V~Dle~a~~fY~~~LGf~~~~~~~~~~G~~~~~~~~~~~G--~--~~l~L~~~~~~~~~~~~~p~~~  101 (418)
T 1sp8_A           26 RFHTLAFHHVELWCADAASAAGRFSFGLGAPLAARSDLSTGNSAHASLLLRSG--S--LSFLFTAPYAHGADAATAALPS  101 (418)
T ss_dssp             SSCEEEEEEEEEECSCHHHHHHHHHHHHTCCEEEEESGGGTCCSEEEEEEEET--T--EEEEEEEECCSSCCGGGCSSTT
T ss_pred             cccCceEEEEEEEeCCHHHHHHHHHHhCCCEEEEEEcCCCCCcceEEEEEeeC--C--EEEEEecCCCCccccccccccc
Confidence            35678999999999999999999999999999877543322  3445555533  2  345555442210          


Q ss_pred             ---c------ccCCCCceEEEEEECCHHHHHHHHHHcCCeeeeCCccCCCCceEEEEEECCCCcEEEEEecCCC------
Q 022831           86 ---S------YDIGTGFGHLAIATEDVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFELIQRGPT------  150 (291)
Q Consensus        86 ---~------~~~g~~~~~i~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dP~G~~iel~~~~~~------  150 (291)
                         .      ...|.|++||+|+|+|+++++++++++|+++..+|....++ ..++.+++|.|..++|++....      
T Consensus       102 ~~~~~~~~~~~~hg~gv~~iAf~V~Dv~~a~~~l~~~Ga~~~~~p~~~~~~-~~~~~i~~~Gg~~~~lvd~~~~~~~~~f  180 (418)
T 1sp8_A          102 FSAAAARRFAADHGLAVRAVALRVADAEDAFRASVAAGARPAFGPVDLGRG-FRLAEVELYGDVVLRYVSYPDGAAGEPF  180 (418)
T ss_dssp             CCHHHHHHHHHHHSSEEEEEEEEESCHHHHHHHHHTTTCCEEEEEEEEETT-EEEEEEEEETTEEEEEEECCTTGGGSSS
T ss_pred             ccchhHHHHHhhcCCeeEEEEEEeCCHHHHHHHHHHCCCEEEeccccccCc-eEEEEEecCCCEEEEEEccCCCCCCccc
Confidence               0      12456899999999999999999999999988776543222 3345567777777777665310      


Q ss_pred             ----------------CCCceeeeeeeCCchhhHHHHHHhcCCeeeeeccCccc-----ceeeeeeccCCCCcceEEEEe
Q 022831          151 ----------------PEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPEL-----KCALAMLGYAEEDQTTVLELA  209 (291)
Q Consensus       151 ----------------~~~~~hv~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~l~l~  209 (291)
                                      ..+|+|+++.|+|++++.+||+++|||++.+..+.++.     +....++..+.  ....|++.
T Consensus       181 ~p~~~~~~~~~~~~~~~~~idHv~i~V~dl~~a~~FY~~vLGf~~~~~~~~~d~~~~~~gl~s~~l~~~~--g~i~l~l~  258 (418)
T 1sp8_A          181 LPGFEGVASPGAADYGLSRFDHIVGNVPELAPAAAYFAGFTGFHEFAEFTTEDVGTAESGLNSMVLANNS--ENVLLPLN  258 (418)
T ss_dssp             STTCEECCCTTCCCCSEEEEEEEEEECSCHHHHHHHHHHHHCCEEEEEEEC--------CEEEEEEECSS--SCCEEEEE
T ss_pred             CCCCcccCCCCCCCCCcceEeeEEEecCCHHHHHHHHHHHcCCEEEEEecccccccccccceEEEEEcCC--CcEEEEEe
Confidence                            12489999999999999999999999998876543221     23334444332  24667776


Q ss_pred             EecC---cee-------eccCceeeEEEEEecChHHHHHHHHHHHHh----hCCeeeecc
Q 022831          210 YSYG---VTE-------YTKGNAYAQVAISTDDVYKSAEVVNLVTQE----LGGKITRQP  255 (291)
Q Consensus       210 ~~~~---~~~-------~~~~~g~~hia~~v~di~~~~~~l~~~~~~----~G~~~~~~p  255 (291)
                      ....   ..+       ...++|++||||.|+||++++++|    ++    +|+++...|
T Consensus       259 e~~~~~~~~s~i~~fl~~~~G~G~~HIAf~vdDI~~a~~~L----~~r~~~~Gv~~l~~P  314 (418)
T 1sp8_A          259 EPVHGTKRRSQIQTFLDHHGGPGVQHMALASDDVLRTLREM----QARSAMGGFEFMAPP  314 (418)
T ss_dssp             EECCCSSSCCHHHHHHHHHTSSEEEEEEEEETTHHHHHHHH----HTSGGGTSCCBCCCC
T ss_pred             ecccccCCCcchhhhhhccCCCCcCEEEEEeCCHHHHHHHH----hhhhccCCeEEccCC
Confidence            5431   111       135789999999999999999999    88    899998876

>1f9z_A Glyoxalase I; beta-alpha-beta-BETA-beta motif, protein-NI(II) complex, homodimer, lyase; 1.50A {Escherichia coli} SCOP: d.32.1.1 PDB: 1fa5_A 1fa6_A 1fa7_A 1fa8_A

Probab=99.87  E-value=1.3e-20  Score=140.91  Aligned_cols=128  Identities=55%  Similarity=0.978  Sum_probs=99.8

Q ss_pred             cceeeEEEEeCCHHHHHHHHHHhcCCEEEEEeccCCCceeeEEeeccCCCcceEEEeeecCCCCcccCCCCceEEEEEEC
Q 022831           22 RRLLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHLAIATE  101 (291)
Q Consensus        22 ~~i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~g~~~~~i~~~v~  101 (291)
                      ++|+|+.|.|+|++++.+||+++|||++......+++.+..+++..+.......+++...........+.+..|++|.|+
T Consensus         1 m~l~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~v~   80 (135)
T 1f9z_A            1 MRLLHTMLRVGDLQRSIDFYTKVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNWGVDKYELGTAYGHIALSVD   80 (135)
T ss_dssp             CCEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEETTTTEEEEEEESSCTTTSCEEEEEEETTCCCCCCCSSEEEEEEECS
T ss_pred             CcceEEEEEeCCHHHHHHHHHhccCcEEEEecccCCCceEEEEEecCCCCCCcEEEEEEcCCCCcccCCCCccEEEEEeC
Confidence            57999999999999999999999999998765545555566777665432345566665433333334557889999999


Q ss_pred             CHHHHHHHHHHcCCeeeeCCccCCCCceEEEEEECCCCcEEEEEecCC
Q 022831          102 DVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFELIQRGP  149 (291)
Q Consensus       102 d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dP~G~~iel~~~~~  149 (291)
                      |+++++++|+++|+++..++...++|...+++++||+|+.|+|++..+
T Consensus        81 d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~DPdG~~iel~~~~~  128 (135)
T 1f9z_A           81 NAAEACEKIRQNGGNVTREAGPVKGGTTVIAFVEDPDGYKIELIEEKD  128 (135)
T ss_dssp             CHHHHHHHHHHTTCEEEEEEEECTTSCCEEEEEECTTSCEEEEEEC--
T ss_pred             CHHHHHHHHHHCCCEEecCCccCCCCceeEEEEECCCCCEEEEEecCC
Confidence            999999999999999988777777776556889999999999998764

>4g6x_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 1.73A {Catenulispora acidiphila}

Probab=99.85  E-value=6.1e-21  Score=146.56  Aligned_cols=126  Identities=17%  Similarity=0.178  Sum_probs=90.8

Q ss_pred             CCccceeeEEEEeCCHHHHHHHHHHhcCCEEEEEeccCCCceeeEEeeccCCCcceEEEeeecCCCCc--c---cCCCCc
Q 022831           19 KDKRRLLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTS--Y---DIGTGF   93 (291)
Q Consensus        19 ~~~~~i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~--~---~~g~~~   93 (291)
                      ...++|+|++|.|+|++++++||+++|||++.........  ....+..........+.+........  .   ..+.+.
T Consensus        22 ~~~Mri~~v~I~V~Dle~A~~FY~dvLGf~v~~d~~~~~~--~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~g~   99 (155)
T 4g6x_A           22 SNAMRIHLTNVFVDDQAKAESFYTGKLGFLVKADVPVGAD--RWLTVVSPEAPDGTQLLLEPSSHAAVTPFKEALVADGI   99 (155)
T ss_dssp             -CCCCCCEEEEEESCHHHHHHHHHHTTCCEEEEEEEETTE--EEEEEECTTCTTSCEEEEEECCSTTHHHHHHHHHHTTC
T ss_pred             cCceEEEEEEEEeCCHHHHHHHHHHHhCCEEEEeecCCCc--eEEEEeccCCCcceEEEeccCCCccccccccccccCCc
Confidence            4667999999999999999999999999999765443332  23333322222333333322221111  1   123477


Q ss_pred             eEEEEEECCHHHHHHHHHHcCCeeeeCCccCCCCceEEEEEECCCCcEEEEEecC
Q 022831           94 GHLAIATEDVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFELIQRG  148 (291)
Q Consensus        94 ~~i~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dP~G~~iel~~~~  148 (291)
                      .+++|.|+|+++++++|+++|+++..+|...++|  .+++|+|||||.|||+|..
T Consensus       100 ~~l~f~VdDvda~~~~l~~~Gv~~~~~p~~~~~g--~~~~f~DPdGn~iel~q~~  152 (155)
T 4g6x_A          100 PAASFAVDDIAAEYERLSALGVRFTQEPTDMGPV--VTAILDDTCGNLIQLMQIA  152 (155)
T ss_dssp             CSEEEEESCHHHHHHHHHHTTCCEEEEEEECSSC--EEEEEECSSSCEEEEEEC-
T ss_pred             eEEEeeechhhhhhhHHhcCCcEEeeCCEEcCCe--EEEEEECCCCCEEEEEEEC
Confidence            8999999999999999999999998888888776  3588999999999999864

>1f9z_A Glyoxalase I; beta-alpha-beta-BETA-beta motif, protein-NI(II) complex, homodimer, lyase; 1.50A {Escherichia coli} SCOP: d.32.1.1 PDB: 1fa5_A 1fa6_A 1fa7_A 1fa8_A

Probab=99.85  E-value=2.8e-20  Score=139.03  Aligned_cols=129  Identities=47%  Similarity=0.811  Sum_probs=97.5

Q ss_pred             CceeeeeeeCCchhhHHHHHHhcCCeeeeeccCcccceeeeeeccCCCCcceEEEEeEecCceeeccCceeeEEEEEecC
Q 022831          153 PLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAISTDD  232 (291)
Q Consensus       153 ~~~hv~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~~hia~~v~d  232 (291)
                      ++.|+.|.|+|++++.+||+++|||++......+++.+.+.++..++......+++...........+.+..|++|.|+|
T Consensus         2 ~l~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~v~d   81 (135)
T 1f9z_A            2 RLLHTMLRVGDLQRSIDFYTKVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNWGVDKYELGTAYGHIALSVDN   81 (135)
T ss_dssp             CEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEETTTTEEEEEEESSCTTTSCEEEEEEETTCCCCCCCSSEEEEEEECSC
T ss_pred             cceEEEEEeCCHHHHHHHHHhccCcEEEEecccCCCceEEEEEecCCCCCCcEEEEEEcCCCCcccCCCCccEEEEEeCC
Confidence            58999999999999999999999999877654334445566666544323466777654433223345688899999999


Q ss_pred             hHHHHHHHHHHHHhhCCeeeecccccCCCCceEEEEECCCCCeEEEEechhhh
Q 022831          233 VYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNEDFL  285 (291)
Q Consensus       233 i~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~~~~  285 (291)
                      ++++++++    +++|+++..+|...+.+..+++|++|||||.|||+++.+..
T Consensus        82 ~~~~~~~l----~~~G~~~~~~~~~~~~g~~~~~~~~DPdG~~iel~~~~~~~  130 (135)
T 1f9z_A           82 AAEACEKI----RQNGGNVTREAGPVKGGTTVIAFVEDPDGYKIELIEEKDAG  130 (135)
T ss_dssp             HHHHHHHH----HHTTCEEEEEEEECTTSCCEEEEEECTTSCEEEEEEC----
T ss_pred             HHHHHHHH----HHCCCEEecCCccCCCCceeEEEEECCCCCEEEEEecCCCC
Confidence            99999999    99999999888766653346789999999999999976643

>2c21_A Trypanothione-dependent glyoxalase I; lyase, glutathionylspermidine, methylglyoxal, detoxification; 2.0A {Leishmania major} SCOP: d.32.1.1

Probab=99.84  E-value=1.1e-19  Score=137.74  Aligned_cols=126  Identities=52%  Similarity=0.899  Sum_probs=94.7

Q ss_pred             cCCccceeeEEEEeCCHHHHHHHHHHhcCCEEEEEeccCCCceeeEEeeccCCCcceEEEeeecCCCCcccCCCCceEEE
Q 022831           18 KKDKRRLLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHLA   97 (291)
Q Consensus        18 ~~~~~~i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~g~~~~~i~   97 (291)
                      .|++++|+|+.|.|+|++++.+||+++|||++......+++.+...++..+.......+++...........+.+..|++
T Consensus         3 ~m~~~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~l~~~~~~~~~~~~~~~~h~~   82 (144)
T 2c21_A            3 HMPSRRMLHTMIRVGDLDRSIKFYTERLGMKVLRKWDVPEDKYTLVFLGYGPEMSSTVLELTYNYGVTSYKHDEAYGHIA   82 (144)
T ss_dssp             ---CCEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEEGGGTEEEEEEESSCTTTSCEEEEEEETTCCCCCCCSSEEEEE
T ss_pred             CCccceeEEEEEEeCCHHHHHHHHHhcCCCEEEEeeecCCCCeEEEEEEcCCCCCceEEEEEecCCCCCCCCCCCceEEE
Confidence            47789999999999999999999999999999876544444555677776542223556666544322333455788999


Q ss_pred             EEECCHHHHHHHHHHcCCeeeeCCccCCCCceEEEEEECCCCcEEEEEecC
Q 022831           98 IATEDVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFELIQRG  148 (291)
Q Consensus        98 ~~v~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dP~G~~iel~~~~  148 (291)
                      |.|+|+++++++|+++|+++..+     +|.+.+++++||+|+.|||++..
T Consensus        83 f~v~d~~~~~~~l~~~G~~~~~~-----~g~~~~~~~~DPdG~~iel~~~~  128 (144)
T 2c21_A           83 IGVEDVKELVADMRKHDVPIDYE-----DESGFMAFVVDPDGYYIELLNEK  128 (144)
T ss_dssp             EEESCHHHHHHHHHHTTCCEEEE-----CSSSSEEEEECTTSCEEEEEEHH
T ss_pred             EEeCCHHHHHHHHHHCCCEEecc-----CCcEEEEEEECCCCCEEEEEEcC
Confidence            99999999999999999998754     44444458999999999999753

>3l7t_A SMU.1112C, putative uncharacterized protein; metal binding protein; 1.80A {Streptococcus mutans}

Probab=99.84  E-value=6.9e-20  Score=136.40  Aligned_cols=123  Identities=25%  Similarity=0.320  Sum_probs=93.5

Q ss_pred             CCccceeeEEEEeCCHHHHHHHHHHhcCCEEEEEeccCCCceeeEEeeccCCCcceEEEeee-------cCCCC---ccc
Q 022831           19 KDKRRLLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTY-------NYGVT---SYD   88 (291)
Q Consensus        19 ~~~~~i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~-------~~~~~---~~~   88 (291)
                      |++++|+||.|.|+|++++.+||+++|||++..+...++.....+++..+.    ..+++..       .....   ...
T Consensus         1 M~i~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~----~~l~l~~~~~~~~~~~~~~~~~~~~   76 (134)
T 3l7t_A            1 MKLKAVHHVALIVSDYDKSYEFYVNQLGFEVIRENHRPKRHDYKLDLKCGD----IELEIFGNKLTDSNYCAPPERISWP   76 (134)
T ss_dssp             -CCCEEEEEEEECSCHHHHHHHHHHTSCCEEEEEEEETTTTEEEEEEEETT----EEEEEEECCTTSTTCCCCCCCCCSS
T ss_pred             CceeeEeEEEEEeCCHHHHHHHHHHhcCCEEEEEeecCCCcceEEEEecCC----eEEEEEecccccccccCCccccCCC
Confidence            678999999999999999999999999999987665555444456666542    2455554       11111   111


Q ss_pred             -CCCCceEEEEEECCHHHHHHHHHHcCCeeeeCCccCCCCceEEEEEECCCCcEEEEEe
Q 022831           89 -IGTGFGHLAIATEDVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFELIQ  146 (291)
Q Consensus        89 -~g~~~~~i~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dP~G~~iel~~  146 (291)
                       .+.+..|++|.|+|+++++++|+++|+++...+....+|.+ .++++||+|+.|||+|
T Consensus        77 ~~~~g~~~~~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~g~~-~~~~~DPdG~~iel~e  134 (134)
T 3l7t_A           77 REACGLRHLAFYVEDVEASRQELIALGIRVEEVRYDDYTGKK-MAFFFDPDGLPLELHE  134 (134)
T ss_dssp             SCCSEEEEEEEECSCHHHHHHHHHHHTCCCCCCEECTTSCCE-EEEEECTTCCEEEEEC
T ss_pred             CCCCCeEEEEEEECCHHHHHHHHHhCCCcccceeccCCCceE-EEEEECCCCCEEEEeC
Confidence             44578899999999999999999999998776666555544 5899999999999985

>4hc5_A Glyoxalase/bleomycin resistance protein/dioxygena; MCSG, GEBA genomes, structural genomics, midwest center for structural genomics; HET: MSE GOL; 1.45A {Sphaerobacter thermophilus}

Probab=99.83  E-value=2.2e-19  Score=133.66  Aligned_cols=126  Identities=16%  Similarity=0.203  Sum_probs=94.7

Q ss_pred             cCCccceeeEEEEeCCHHHHHHHHHHhcCCEEEEEeccCCCceeeEEeeccCCCcceEEEeeecCCCCcccCCCCceEEE
Q 022831           18 KKDKRRLLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHLA   97 (291)
Q Consensus        18 ~~~~~~i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~g~~~~~i~   97 (291)
                      .+|+++|+|+.|.|+|++++.+||+++|||++......+++ .....+..+  .....+.+.............+..|++
T Consensus         8 ~~m~~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~-~~~~~~~~~--~~~~~l~l~~~~~~~~~~~~~~~~~~~   84 (133)
T 4hc5_A            8 SLMIAYVHSATIIVSDQEKALDFYVNTLGFEKVFDNQLDPN-MRFVTVVPP--GAQTQVALGLPSWYEDGRKPGGYTGIS   84 (133)
T ss_dssp             CCSCCEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEEETT-EEEEEEECT--TCSCEEEEECGGGCSSCCCSCEEEEEE
T ss_pred             cccccceeEEEEEECCHHHHHHHHHhCcCCcEeeecccCCC-ceEEEEECC--CCceEEEEecCcccccccCCCCeEEEE
Confidence            36789999999999999999999999999999876543222 223334332  234455555433211112234678999


Q ss_pred             EEECCHHHHHHHHHHcCCeeeeCCccCCCCceEEEEEECCCCcEEEEEec
Q 022831           98 IATEDVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFELIQR  147 (291)
Q Consensus        98 ~~v~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dP~G~~iel~~~  147 (291)
                      |.|+|+++++++|+++|+++..++...++|.+ .++++||+|+.|+|++.
T Consensus        85 ~~v~d~~~~~~~l~~~G~~~~~~~~~~~~g~~-~~~~~DP~G~~~el~ee  133 (133)
T 4hc5_A           85 LITRDIDEAYKTLTERGVTFTKPPEMMPWGQR-ATWFSDPDGNQFFLVEE  133 (133)
T ss_dssp             EEESCHHHHHHHHHHTTCEESSSCEECTTSCE-EEEEECTTCEEEEEEEC
T ss_pred             EEeCCHHHHHHHHHHCCCEeecCCCcCCCCCE-EEEEECCCCCEEEEEeC
Confidence            99999999999999999999888888887764 58999999999999873

>3pkv_A Toxoflavin lyase (TFLA); metalloenzyme, vicinal oxygen chelate superfamily; 1.34A {Paenibacillus polymyxa} PDB: 3pkw_A 3pkx_A* 3oul_A 3oum_A*

Probab=99.83  E-value=2.7e-19  Score=147.67  Aligned_cols=148  Identities=16%  Similarity=0.207  Sum_probs=110.7

Q ss_pred             CcCCccceeeEEEEeCCHHHHHHHHHHhcCCEEEEEeccCCCceeeEEeeccCCCcceEEEeeecCCCCcccCCCCceEE
Q 022831           17 PKKDKRRLLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHL   96 (291)
Q Consensus        17 ~~~~~~~i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~g~~~~~i   96 (291)
                      ....+++|+||+|.|+|++++++||+++|||++..+..      ..+++..+.    ..+.+.....     .+.+..|+
T Consensus        20 ~~~~~~~l~hV~L~V~Dle~s~~FY~~vLGl~~~~~~~------~~~~L~~g~----~~l~l~~~~~-----~~~~~~hi   84 (252)
T 3pkv_A           20 FQGHMTSIKQLTLYTAELDRMLAFYTNMLGAQHVHEQA------DAFTIQLGV----SQIQFRAAAD-----GTKPFYHI   84 (252)
T ss_dssp             -----CCEEEEEEEESCHHHHHHHHHHHHCGGGEEECS------SEEEEEETT----EEEEEEECCT-----TCCCCCEE
T ss_pred             ccCcCceEEEEEEEeCCHHHHHHHHHHhcCCEEEEccC------CEEEEEeCC----EEEEEEECCC-----CCCCeeEE
Confidence            33478999999999999999999999999999876532      145666542    3344544321     13367899


Q ss_pred             EEEEC--CHHHHHHHHHHcCCeeeeC-Ccc----CCCCceEEEEEECCCCcEEEEEecCCC------------CCCceee
Q 022831           97 AIATE--DVYKMVENIRAKGGNVTRE-PGP----LKGMTTHFAFVKDPDGYIFELIQRGPT------------PEPLCQV  157 (291)
Q Consensus        97 ~~~v~--d~~~~~~~l~~~G~~~~~~-~~~----~~~g~~~~~~~~dP~G~~iel~~~~~~------------~~~~~hv  157 (291)
                      +|.|+  ++++++++|+++ +++..+ +..    ..++ ...+||+||||+.|||++....            +.++.||
T Consensus        85 af~V~~~dld~~~~rL~~~-v~~~~~~~~~~~~~~~~g-~~~~~f~DPdGn~iEl~~~~~~~~~~~~~~~~~~i~glghV  162 (252)
T 3pkv_A           85 AINIAANHFQEGKAWLSGF-GELLTENDEDQAYFPFFN-AYSCYVEDPSGNIIELISRQQAAPVLDKPFSADQLLSIGEI  162 (252)
T ss_dssp             EEEECTTCHHHHHHHHTTS-SCCCCBTTBSCEEETTTT-EEEEEEECTTCCEEEEEEESSSSCCCCSCCCGGGCCEEEEE
T ss_pred             EEEecHHHHHHHHHHHHhc-ceEeccCCccccccccCC-eEEEEEECCCCCEEEEEEeCCCCccccCCCCHHHCcEeeeE
Confidence            99995  599999999999 887652 221    2344 3458999999999999987532            2369999


Q ss_pred             eeeeCCchhhHHHHHHhcCCeeeee
Q 022831          158 MLRVGDLGRSIKFYEKALGMKLLRT  182 (291)
Q Consensus       158 ~l~v~D~~~~~~Fy~~~lG~~~~~~  182 (291)
                      .|.|+|++++.+|| ++|||+....
T Consensus       163 ~L~v~d~~~~~~fl-~~LG~~~~~~  186 (252)
T 3pkv_A          163 NITTSDVEQAATRL-KQAELPVKLD  186 (252)
T ss_dssp             EEECSCHHHHHHHH-HHTTCCCCGG
T ss_pred             EEEeCCHHHHHHHH-HHcCCCcccC
Confidence            99999999999999 9999998765

>4g6x_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 1.73A {Catenulispora acidiphila}

Probab=99.82  E-value=4.8e-20  Score=141.54  Aligned_cols=124  Identities=17%  Similarity=0.146  Sum_probs=89.5

Q ss_pred             CCCceeeeeeeCCchhhHHHHHHhcCCeeeeeccCcccceeeeeeccCCCCcceEEEEeEecCce--e---eccCceeeE
Q 022831          151 PEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVT--E---YTKGNAYAQ  225 (291)
Q Consensus       151 ~~~~~hv~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~--~---~~~~~g~~h  225 (291)
                      .-+|.|+.|.|+|+++|++||+++|||++....+.++  .....+..........+.+.......  +   ...+.|..|
T Consensus        24 ~Mri~~v~I~V~Dle~A~~FY~dvLGf~v~~d~~~~~--~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~g~~~  101 (155)
T 4g6x_A           24 AMRIHLTNVFVDDQAKAESFYTGKLGFLVKADVPVGA--DRWLTVVSPEAPDGTQLLLEPSSHAAVTPFKEALVADGIPA  101 (155)
T ss_dssp             CCCCCEEEEEESCHHHHHHHHHHTTCCEEEEEEEETT--EEEEEEECTTCTTSCEEEEEECCSTTHHHHHHHHHHTTCCS
T ss_pred             ceEEEEEEEEeCCHHHHHHHHHHHhCCEEEEeecCCC--ceEEEEeccCCCcceEEEeccCCCccccccccccccCCceE
Confidence            4479999999999999999999999999876543333  23333332222222333332221111  1   112347789


Q ss_pred             EEEEecChHHHHHHHHHHHHhhCCeeeecccccCCCCceEEEEECCCCCeEEEEech
Q 022831          226 VAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNE  282 (291)
Q Consensus       226 ia~~v~di~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~  282 (291)
                      ++|.|+|++++++++    +++|+++..+|...++  ++++||+|||||+|||+|..
T Consensus       102 l~f~VdDvda~~~~l----~~~Gv~~~~~p~~~~~--g~~~~f~DPdGn~iel~q~~  152 (155)
T 4g6x_A          102 ASFAVDDIAAEYERL----SALGVRFTQEPTDMGP--VVTAILDDTCGNLIQLMQIA  152 (155)
T ss_dssp             EEEEESCHHHHHHHH----HHTTCCEEEEEEECSS--CEEEEEECSSSCEEEEEEC-
T ss_pred             EEeeechhhhhhhHH----hcCCcEEeeCCEEcCC--eEEEEEECCCCCEEEEEEEC
Confidence            999999999999999    9999999999987765  58899999999999999954

>2p25_A Glyoxalase family protein; structural genomics, MCSG, PSI-2, protein struct initiative, midwest center for structural genomics, oxidore; 1.70A {Enterococcus faecalis}

Probab=99.82  E-value=2.2e-19  Score=132.28  Aligned_cols=123  Identities=23%  Similarity=0.316  Sum_probs=90.3

Q ss_pred             CCccceeeEEEEeCCHHHHHHHHHHhcCCEEEEEeccCCCceeeEEeeccCCCcceEEEeeecCCC---CcccCCCCceE
Q 022831           19 KDKRRLLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGV---TSYDIGTGFGH   95 (291)
Q Consensus        19 ~~~~~i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~---~~~~~g~~~~~   95 (291)
                      ||+.+|+|+.|.|+|++++.+||+++|||++......+++.....++..++  .  .+++......   .....+.+..|
T Consensus         1 M~~~~i~hi~l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~--~--~l~l~~~~~~~~~~~~~~~~g~~~   76 (126)
T 2p25_A            1 MFFKEIHHVAINASNYQATKNFYVEKLGFEVLRENHRPEKNDIKLDLKLGS--Q--ELEIFISDQFPARPSYPEALGLRH   76 (126)
T ss_dssp             CTTSCCCCEEEEESCHHHHHHHHTTTTCCEEEEEEEEGGGTEEEEEEEETT--E--EEEEEECTTCCCCCCSSCCSSCCC
T ss_pred             CcccccceEEEEeCCHHHHHHHHHHhcCCEEEeeccCCCCcceEEEEecCC--e--EEEEEeccCCCCCCCCCCCccceE
Confidence            688999999999999999999999999999976543322222234455432  2  4555542211   11123457889


Q ss_pred             EEEEECCHHHHHHHHHHcCCeeeeCCccCCCCceEEEEEECCCCcEEEEEe
Q 022831           96 LAIATEDVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFELIQ  146 (291)
Q Consensus        96 i~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dP~G~~iel~~  146 (291)
                      ++|.|+|+++++++|+++|+++...+....+|.+ .++++||+|+.|||++
T Consensus        77 ~~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~g~~-~~~~~DPdG~~iel~e  126 (126)
T 2p25_A           77 LAFKVEHIEEVIAFLNEQGIETEPLRVDDFTGKK-MTFFFDPDGLPLELHE  126 (126)
T ss_dssp             EEEECSCHHHHHHHHHHTTCCCCCCEECTTTCCE-EEEEECTTCCEEEEEC
T ss_pred             EEEEeCCHHHHHHHHHHcCCccccccccCCCCcE-EEEEECCCCCEEEeeC
Confidence            9999999999999999999998766554555544 5889999999999975

>3e5d_A Putative glyoxalase I; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, lyase; 2.70A {Listeria monocytogenes str}

Probab=99.82  E-value=3.6e-19  Score=131.50  Aligned_cols=120  Identities=22%  Similarity=0.329  Sum_probs=93.4

Q ss_pred             cceeeEEEEeCCHHHHHHHHHHhcCCEEEEEeccCCCceeeEEeeccCCCcceEEEeeecCCC--CcccCCCCceEEEEE
Q 022831           22 RRLLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGV--TSYDIGTGFGHLAIA   99 (291)
Q Consensus        22 ~~i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~--~~~~~g~~~~~i~~~   99 (291)
                      ++|+|+.|.|+|++++++||+++|||++......++.++..+++..+.   ...+.+......  .+...+.+..|++|.
T Consensus         2 m~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~---~~~l~l~~~~~~~~~~~~~~~g~~hi~~~   78 (127)
T 3e5d_A            2 MKIEHVALWTTNLEQMKQFYVTYFGATANDLYENKTKGFNSYFLSFED---GARLEIMSRTDVTGKTTGENLGWAHIAIS   78 (127)
T ss_dssp             CCCCEEEEECSSHHHHHHHHHHHHCCEECCCEEEGGGTEEEEEEECSS---SCEEEEEEETTCCCCCCSSCSSCCCEEEE
T ss_pred             CEEEEEEEEECCHHHHHHHHHHhcCCeeecccccCCCCccEEEEEcCC---CcEEEEEecCCCCCCCCcCCCceEEEEEE
Confidence            579999999999999999999999999976544444455667776543   245666554322  222245578999999


Q ss_pred             ECC---HHHHHHHHHHcCCeeeeCCccCCCCceEEEEEECCCCcEEEEE
Q 022831          100 TED---VYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFELI  145 (291)
Q Consensus       100 v~d---~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dP~G~~iel~  145 (291)
                      |+|   +++++++|+++|+++..+|...++|.+ .++++||+||.|||+
T Consensus        79 v~d~~~v~~~~~~l~~~G~~~~~~~~~~~~g~~-~~~~~DPdG~~iel~  126 (127)
T 3e5d_A           79 TGTKEAVDELTEKLRQDGFAIAGEPRMTGDGYY-ESVVLDPEGNRIEIT  126 (127)
T ss_dssp             CSSHHHHHHHHHHHHHTTCCEEEEEEECTTSCE-EEEEECTTSCEEEEE
T ss_pred             cCCHHHHHHHHHHHHHcCCeEecCcccCCCCcE-EEEEECCCCCEEEEe
Confidence            999   889999999999999887777767654 488999999999986

>3rmu_A Methylmalonyl-COA epimerase, mitochondrial; structural genomics consortium, SGC, vitamin B12, mitochondr isomerase; HET: PG4; 1.80A {Homo sapiens} SCOP: d.32.1.0

Probab=99.81  E-value=2.9e-19  Score=133.00  Aligned_cols=123  Identities=24%  Similarity=0.341  Sum_probs=91.2

Q ss_pred             CccceeeEEEEeCCHHHHHHHHHHhcCCEEEEEeccCCCceeeEEeeccCCCcceEEEeeecCCC-Ccc------cCCCC
Q 022831           20 DKRRLLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGV-TSY------DIGTG   92 (291)
Q Consensus        20 ~~~~i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~-~~~------~~g~~   92 (291)
                      |+.+|+|+.|.|+|++++.+||+++|||++......++.+...+++..+.    ..+++...... .+.      ..+.+
T Consensus         2 m~~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~----~~~~l~~~~~~~~~~~~~~~~~~~~g   77 (134)
T 3rmu_A            2 MLGRLNHVAIAVPDLEKAAAFYKNILGAQVSEAVPLPEHGVSVVFVNLGN----TKMELLHPLGLDSPIAGFLQKNKAGG   77 (134)
T ss_dssp             CEEEEEEEEEECSCHHHHHHHHHHTSCCEECCCEEEGGGTEEEEEEECSS----SEEEEEEECSTTCTTHHHHHHCTTCE
T ss_pred             ccceeeeEEEEeCCHHHHHHHHHHhcCCEEeEeeecCCCCEEEEEEecCC----EEEEEEecCCCCchhhhhhhccCCCC
Confidence            68999999999999999999999999999976554444455667776542    23444443221 111      23457


Q ss_pred             ceEEEEEECCHHHHHHHHHHcCCeeeeCCcc-CCCCceEEEEE--ECCCCcEEEEEec
Q 022831           93 FGHLAIATEDVYKMVENIRAKGGNVTREPGP-LKGMTTHFAFV--KDPDGYIFELIQR  147 (291)
Q Consensus        93 ~~~i~~~v~d~~~~~~~l~~~G~~~~~~~~~-~~~g~~~~~~~--~dP~G~~iel~~~  147 (291)
                      ..|++|.|+|+++++++|+++|+++..++.. ..+|.+ ..++  +||+|+.|||++.
T Consensus        78 ~~hi~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~~g~~-~~~~~~~DPdG~~iel~e~  134 (134)
T 3rmu_A           78 MHHICIEVDNINAAVMDLKKKKIRSLSEEVKIGAHGKP-VIFLHPKDCGGVLVELEQA  134 (134)
T ss_dssp             EEEEEEEESCHHHHHHHHHHTTCTTBCCCCEECTTSSE-EEEECSCSSCCSCEEEEEC
T ss_pred             ceEEEEEcCCHHHHHHHHHHcCCcccCCCcccCCCCce-EEEEecCCCCcEEEEEEcC
Confidence            8999999999999999999999997765433 334443 4566  8999999999873

>3vw9_A Lactoylglutathione lyase; glyoxalase, lyase-lyase inhibitor complex; HET: EPE HPJ; 1.47A {Homo sapiens} PDB: 1qip_A* 1fro_A* 1qin_A* 1bh5_A* 2za0_A*

Probab=99.81  E-value=3.3e-19  Score=141.10  Aligned_cols=130  Identities=29%  Similarity=0.533  Sum_probs=101.5

Q ss_pred             CCCceeeeeeeCCchhhHHHHHHhcCCeeeeeccCcccceeeeeeccCCCCc---------------ceEEEEeEecCce
Q 022831          151 PEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQ---------------TTVLELAYSYGVT  215 (291)
Q Consensus       151 ~~~~~hv~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~l~l~~~~~~~  215 (291)
                      ..+++|+.|.|+|++++.+||+++|||++......+.+.+.+.+++.+....               ...++|....+..
T Consensus        32 ~~~l~Hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~  111 (187)
T 3vw9_A           32 DFLLQQTMLRVKDPKKSLDFYTRVLGMTLIQKCDFPIMKFSLYFLAYEDKNDIPKEKDEKIAWALSRKATLELTHNWGTE  111 (187)
T ss_dssp             TCEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEETTTTEEEEEEESCCGGGSCSSHHHHHHHHTTCSSEEEEEEETTGG
T ss_pred             eeEEEEEEEEeCCHHHHHHHHHHhcCcEEeeccccCCCceeEEEecCCCcccccccccchhhhcccCCceEEEEEecCCC
Confidence            3569999999999999999999999999888765555667777777543211               2567776544322


Q ss_pred             -----eecc----CceeeEEEEEecChHHHHHHHHHHHHhhCCeeeecccccCCCCceEEEEECCCCCeEEEEechhhhh
Q 022831          216 -----EYTK----GNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNEDFLK  286 (291)
Q Consensus       216 -----~~~~----~~g~~hia~~v~di~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~~~~~  286 (291)
                           .+..    ..|++|++|.|+|++++++++    +++|+++..+|...++  .+++||+|||||.|||+++....+
T Consensus       112 ~~~~~~~~~g~~~~~g~~hl~f~v~dv~~~~~~l----~~~G~~~~~~~~~~~~--~~~~~~~DPdG~~iel~~~~~~~~  185 (187)
T 3vw9_A          112 DDETQSYHNGNSDPRGFGHIGIAVPDVYSACKRF----EELGVKFVKKPDDGKM--KGLAFIQDPDGYWIEILNPNKMAT  185 (187)
T ss_dssp             GCTTCCCCCSSSSSCBEEEEEEECSCHHHHHHHH----HHTTCCEEECTTSSSS--TTCEEEECTTCCEEEEECGGGSGG
T ss_pred             CCCccccccCCCCCCceeEEEEEECCHHHHHHHH----HHCCCeEeeCCccCCc--ceEEEEECCCCCEEEEEEcccccc
Confidence                 1111    238899999999999999999    9999999998876554  457899999999999999877653

>3hdp_A Glyoxalase-I; glutathione,lyase, methylglyoxal,11003P,PSI2, structural GENOMIC,NYSGXRC., structural genomics; 2.06A {Clostridium acetobutylicum} PDB: 2qh0_A

Probab=99.80  E-value=4.6e-19  Score=132.16  Aligned_cols=123  Identities=21%  Similarity=0.222  Sum_probs=91.3

Q ss_pred             CCccceeeEEEEeCCHHHHHHHHHHhcCCEEEEEe-ccCCCceeeEEeeccCCCcceEEEeeecCCCCcc-----cCCCC
Q 022831           19 KDKRRLLHAVYRVGDLDRTIKYYTECFGMELLRKR-DVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTSY-----DIGTG   92 (291)
Q Consensus        19 ~~~~~i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~-----~~g~~   92 (291)
                      .|+++|+||+|.|+|++++++||+ +|||++.... ..+..+....++..+    ...+++.+.......     ..+.+
T Consensus         3 ~M~~~i~hv~i~v~Dl~~a~~FY~-~lG~~~~~~~~~~~~~~~~~~~~~~~----~~~l~l~~~~~~~~~~~~~~~~~~g   77 (133)
T 3hdp_A            3 HMSLKVHHIGYAVKNIDSALKKFK-RLGYVEESEVVRDEVRKVYIQFVING----GYRVELVAPDGEDSPINKTIKKGST   77 (133)
T ss_dssp             CCCCCEEEEEEECSCHHHHHHHHH-HTTCEECSCCEEETTTTEEEEEEEET----TEEEEEEEESSTTCTHHHHTTTSCE
T ss_pred             ccceeeCEEEEEECCHHHHHHHHH-HcCCeeecceeccCCcceEEEEEeCC----CEEEEEEecCCCCChHHHHHhcCCc
Confidence            478999999999999999999999 9999986542 223344456666653    244666654322111     11568


Q ss_pred             ceEEEEEECCHHHHHHHHHHcCCeeeeCCcc--CCCCceEEEEEECCCCcEEEEEec
Q 022831           93 FGHLAIATEDVYKMVENIRAKGGNVTREPGP--LKGMTTHFAFVKDPDGYIFELIQR  147 (291)
Q Consensus        93 ~~~i~~~v~d~~~~~~~l~~~G~~~~~~~~~--~~~g~~~~~~~~dP~G~~iel~~~  147 (291)
                      +.|++|.|+|+++++++|+++|+++..+|..  ..+|. .++|++||||+.|||+|.
T Consensus        78 ~~hiaf~v~di~~~~~~l~~~G~~~~~~p~~~~~~~g~-~~~~~~dPdG~~iEl~e~  133 (133)
T 3hdp_A           78 PYHICYEVEDIQKSIEEMSQIGYTLFKKAEIAPAIDNR-KVAFLFSTDIGLIELLEK  133 (133)
T ss_dssp             EEEEEEEESCHHHHHHHHTTTTEEEEEEEEEEGGGTTE-EEEEEEETTTEEEEEEEC
T ss_pred             eEEEEEEcCCHHHHHHHHHHcCCccccCCeecccCCCc-eEEEEECCCceEEEEecC
Confidence            8899999999999999999999998765432  23444 468999999999999973

>2rk0_A Glyoxalase/bleomycin resistance protein/dioxygena; 11002Z, glyoxylase, dioxygenas PSI-II; 2.04A {Frankia SP}

Probab=99.80  E-value=1.4e-18  Score=130.18  Aligned_cols=124  Identities=19%  Similarity=0.262  Sum_probs=91.8

Q ss_pred             CCccceeeEEEEeCCHHHHHHHHHHhcCCEEEEEeccCCCceeeEEeeccCCCcceEEEeeecCCC--Ccc-cCCCCceE
Q 022831           19 KDKRRLLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGV--TSY-DIGTGFGH   95 (291)
Q Consensus        19 ~~~~~i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~--~~~-~~g~~~~~   95 (291)
                      |++++|.|+.|.|+|++++++||+++|||++.......++.+..+++. +    ...+.+......  ... ..+.+..|
T Consensus         1 M~i~~i~hv~l~v~Dl~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~-~----~~~l~l~~~~~~~~~~~~~~~~g~~h   75 (136)
T 2rk0_A            1 MSLSGVSHVSLTVRDLDISCRWYTEILDWKELVRGRGDTTSFAHGVLP-G----GLSIVLREHDGGGTDLFDETRPGLDH   75 (136)
T ss_dssp             -CEEEEEEEEEECSCHHHHHHHHHHHHCCEEEEEEECSSEEEEEEECT-T----SCEEEEEEETTCSSSCCCTTSSEEEE
T ss_pred             CCCCcccEEEEEeCCHHHHHHHHHHhcCCEEEeeccCCCCceEEEEEc-C----CCEEEEEeCCCCcccCCCCCCCCcce
Confidence            678999999999999999999999999999987654333334445554 2    234555554321  111 23457789


Q ss_pred             EEEEE---CCHHHHHHHHHHcCCeeeeCCccCCCCceEEEEEECCCCcEEEEEecCCC
Q 022831           96 LAIAT---EDVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFELIQRGPT  150 (291)
Q Consensus        96 i~~~v---~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dP~G~~iel~~~~~~  150 (291)
                      ++|.|   +|+++++++|+++|+++. ++...++|  ..+|++||+|+.|||++..+.
T Consensus        76 ~~f~v~~~~d~~~~~~~l~~~G~~~~-~~~~~~~g--~~~~~~DPdG~~iel~~~~~~  130 (136)
T 2rk0_A           76 LSFSVESMTDLDVLEERLAKAGAAFT-PTQELPFG--WILAFRDADNIALEAMLGREG  130 (136)
T ss_dssp             EEEEESSHHHHHHHHHHHHHHTCCBC-CCEEETTE--EEEEEECTTCCEEEEEEECTT
T ss_pred             EEEEeCCHHHHHHHHHHHHHCCCccc-CccccCCc--eEEEEECCCCCEEEEEEcCCC
Confidence            99999   889999999999999976 34444555  458899999999999987643

>3vw9_A Lactoylglutathione lyase; glyoxalase, lyase-lyase inhibitor complex; HET: EPE HPJ; 1.47A {Homo sapiens} PDB: 1qip_A* 1fro_A* 1qin_A* 1bh5_A* 2za0_A*

Probab=99.80  E-value=2.5e-18  Score=135.98  Aligned_cols=128  Identities=34%  Similarity=0.616  Sum_probs=99.2

Q ss_pred             CCccceeeEEEEeCCHHHHHHHHHHhcCCEEEEEeccCCCceeeEEeeccCCCc---------------ceEEEeeecCC
Q 022831           19 KDKRRLLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQS---------------YFVVELTYNYG   83 (291)
Q Consensus        19 ~~~~~i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~l~l~~~~~   83 (291)
                      ....+|+|+.|.|+|++++++||+++|||++..+...+.+.+..+++..+....               ...+++.....
T Consensus        30 ~~~~~l~Hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~  109 (187)
T 3vw9_A           30 TKDFLLQQTMLRVKDPKKSLDFYTRVLGMTLIQKCDFPIMKFSLYFLAYEDKNDIPKEKDEKIAWALSRKATLELTHNWG  109 (187)
T ss_dssp             GTTCEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEETTTTEEEEEEESCCGGGSCSSHHHHHHHHTTCSSEEEEEEETT
T ss_pred             cceeEEEEEEEEeCCHHHHHHHHHHhcCcEEeeccccCCCceeEEEecCCCcccccccccchhhhcccCCceEEEEEecC
Confidence            456899999999999999999999999999988776666777788887643211               24566644322


Q ss_pred             C-----CcccCC----CCceEEEEEECCHHHHHHHHHHcCCeeeeCCccCCCCceEEEEEECCCCcEEEEEecC
Q 022831           84 V-----TSYDIG----TGFGHLAIATEDVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFELIQRG  148 (291)
Q Consensus        84 ~-----~~~~~g----~~~~~i~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dP~G~~iel~~~~  148 (291)
                      .     ..+..+    .++.|++|.|+|+++++++|+++|+++...+....++.  ++|++||+|+.|||++..
T Consensus       110 ~~~~~~~~~~~g~~~~~g~~hl~f~v~dv~~~~~~l~~~G~~~~~~~~~~~~~~--~~~~~DPdG~~iel~~~~  181 (187)
T 3vw9_A          110 TEDDETQSYHNGNSDPRGFGHIGIAVPDVYSACKRFEELGVKFVKKPDDGKMKG--LAFIQDPDGYWIEILNPN  181 (187)
T ss_dssp             GGGCTTCCCCCSSSSSCBEEEEEEECSCHHHHHHHHHHTTCCEEECTTSSSSTT--CEEEECTTCCEEEEECGG
T ss_pred             CCCCCccccccCCCCCCceeEEEEEECCHHHHHHHHHHCCCeEeeCCccCCcce--EEEEECCCCCEEEEEEcc
Confidence            1     122222    37889999999999999999999999988876655543  478999999999999864

>3rmu_A Methylmalonyl-COA epimerase, mitochondrial; structural genomics consortium, SGC, vitamin B12, mitochondr isomerase; HET: PG4; 1.80A {Homo sapiens} SCOP: d.32.1.0

Probab=99.79  E-value=7.8e-19  Score=130.62  Aligned_cols=122  Identities=18%  Similarity=0.257  Sum_probs=91.6

Q ss_pred             CCceeeeeeeCCchhhHHHHHHhcCCeeeeeccCcccceeeeeeccCCCCcceEEEEeEecCceee-------ccCceee
Q 022831          152 EPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEY-------TKGNAYA  224 (291)
Q Consensus       152 ~~~~hv~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~-------~~~~g~~  224 (291)
                      .++.|+.|.|+|++++.+||+++|||++......++.+....++..+    ...+++....+....       +.+.|++
T Consensus         4 ~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~----~~~~~l~~~~~~~~~~~~~~~~~~~~g~~   79 (134)
T 3rmu_A            4 GRLNHVAIAVPDLEKAAAFYKNILGAQVSEAVPLPEHGVSVVFVNLG----NTKMELLHPLGLDSPIAGFLQKNKAGGMH   79 (134)
T ss_dssp             EEEEEEEEECSCHHHHHHHHHHTSCCEECCCEEEGGGTEEEEEEECS----SSEEEEEEECSTTCTTHHHHHHCTTCEEE
T ss_pred             ceeeeEEEEeCCHHHHHHHHHHhcCCEEeEeeecCCCCEEEEEEecC----CEEEEEEecCCCCchhhhhhhccCCCCce
Confidence            35899999999999999999999999987665444444556666644    245666553322111       2356899


Q ss_pred             EEEEEecChHHHHHHHHHHHHhhCCeeeecccccCCCCceEEEE--ECCCCCeEEEEec
Q 022831          225 QVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSF--VDPDGWKTVLVDN  281 (291)
Q Consensus       225 hia~~v~di~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~--~DPdG~~iel~~~  281 (291)
                      |++|.|+|++++++++    +++|+++..++......+.++.++  +|||||.|||+|.
T Consensus        80 hi~~~v~d~~~~~~~l----~~~G~~~~~~~~~~~~~g~~~~~~~~~DPdG~~iel~e~  134 (134)
T 3rmu_A           80 HICIEVDNINAAVMDL----KKKKIRSLSEEVKIGAHGKPVIFLHPKDCGGVLVELEQA  134 (134)
T ss_dssp             EEEEEESCHHHHHHHH----HHTTCTTBCCCCEECTTSSEEEEECSCSSCCSCEEEEEC
T ss_pred             EEEEEcCCHHHHHHHH----HHcCCcccCCCcccCCCCceEEEEecCCCCcEEEEEEcC
Confidence            9999999999999999    999999887765544444566666  8999999999973

>2za0_A Glyoxalase I; lyase, lactoylglutathione lyase, methyl- gerfelin; HET: MGI; 1.70A {Mus musculus} PDB: 1qip_A* 1fro_A* 1qin_A* 1bh5_A*

Probab=99.79  E-value=2.6e-18  Score=135.54  Aligned_cols=149  Identities=32%  Similarity=0.543  Sum_probs=102.0

Q ss_pred             CCCCCCCCCchhhc--------cCCcCCccceeeEEEEeCCHHHHHHHHHHhcCCEEEEEeccCCCceeeEEeeccCC--
Q 022831            1 MAEASPAVANAELL--------EWPKKDKRRLLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPE--   70 (291)
Q Consensus         1 ~~~~~~~~~~~~~~--------~~~~~~~~~i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~--   70 (291)
                      ||++.++++.....        ..+.+.+++|+|+.|.|+|++++++||+++|||++......+...+..+++..+..  
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~l~~~~~~~   80 (184)
T 2za0_A            1 MAEPQPASSGLTDETAFSCCSDPDPSTKDFLLQQTMLRIKDPKKSLDFYTRVLGLTLLQKLDFPAMKFSLYFLAYEDKND   80 (184)
T ss_dssp             ---CCCCCCCCCHHHHHHTCCCCCGGGTTCEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEEGGGTEEEEEEESCCGGG
T ss_pred             CCCCCcccCCcchhhhhcccCCcCCCccceeEEEEEEEeCCHHHHHHHHHHhcCCEEEEeccCCCCCceeEEeccccccc
Confidence            67777666643321        12334578999999999999999999999999999876543333445555554210  


Q ss_pred             -------------CcceEEEeeecCCC-----Cccc----CCCCceEEEEEECCHHHHHHHHHHcCCeeeeCCccCCCCc
Q 022831           71 -------------QSYFVVELTYNYGV-----TSYD----IGTGFGHLAIATEDVYKMVENIRAKGGNVTREPGPLKGMT  128 (291)
Q Consensus        71 -------------~~~~~l~l~~~~~~-----~~~~----~g~~~~~i~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~g~  128 (291)
                                   .....++|......     ..+.    ...+..|++|.|+|+++++++|+++|+++..++...+++ 
T Consensus        81 ~~~~~~~~~~~~~~~~~~l~L~~~~~~~~~~~~~~~~~~~~~~g~~hi~f~v~dvd~~~~~l~~~G~~~~~~p~~~~~~-  159 (184)
T 2za0_A           81 IPKDKSEKTAWTFSRKATLELTHNWGTEDDETQSYHNGNSDPRGFGHIGIAVPDVYSACKRFEELGVKFVKKPDDGKMK-  159 (184)
T ss_dssp             SCSSHHHHHHHHTTSSSEEEEEEETTGGGCTTCCCCCSSSSSCCEEEEEEECSCHHHHHHHHHHTTCCEEECTTSSSST-
T ss_pred             CCcccchheeeecCCCceEEEEecCCCCCCcccccccCCCCCCCeeEEEEEeCCHHHHHHHHHHCCCeeecCCcCCCce-
Confidence                         01345666543211     1111    124778999999999999999999999988877655443 


Q ss_pred             eEEEEEECCCCcEEEEEecCCCC
Q 022831          129 THFAFVKDPDGYIFELIQRGPTP  151 (291)
Q Consensus       129 ~~~~~~~dP~G~~iel~~~~~~~  151 (291)
                      + ++||+||+|+.|||++....|
T Consensus       160 ~-~~~~~DPdG~~iel~~~~~~~  181 (184)
T 2za0_A          160 G-LAFIQDPDGYWIEILNPNKIA  181 (184)
T ss_dssp             T-CEEEECTTCCEEEEECTTTGG
T ss_pred             e-EEEEECCCCCEEEEEecCccc
Confidence            2 478999999999999876543

>3oa4_A Glyoxalase, BH1468 protein; structural genomics, protein structure initiative, glyoxalas PSI-biology, lyase; 1.94A {Bacillus halodurans}

Probab=99.79  E-value=1.4e-18  Score=134.15  Aligned_cols=127  Identities=21%  Similarity=0.409  Sum_probs=96.2

Q ss_pred             CCccceeeEEEEeCCHHHHHHHHHHhcCCEEEEEeccCCCceeeEEeeccCCCcceEEEeeecCCCCc-c-----cCCCC
Q 022831           19 KDKRRLLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTS-Y-----DIGTG   92 (291)
Q Consensus        19 ~~~~~i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~-~-----~~g~~   92 (291)
                      +++++|+||.|.|+|++++++||+++|||++......+..+...+++..+.    ..+++........ .     ..+.|
T Consensus         4 ~~~~~i~Hv~l~V~Dl~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~g~----~~l~l~~~~~~~~~~~~~~~~~~~g   79 (161)
T 3oa4_A            4 EKSNKLDHIGIAVTSIKDVLPFYVGSLKLKLLGMEDLPSQGVKIAFLEIGE----SKIELLEPLSEESPIAKFIQKRGEG   79 (161)
T ss_dssp             -CCCEEEEEEEECSCHHHHHHHHHHTSCCEEEEEEEEGGGTEEEEEEEETT----EEEEEEEESSTTSHHHHHHHHHCSE
T ss_pred             cccCcCCEEEEEECCHHHHHHHHHHccCCeEeeeeccCCCCeEEEEEeCCC----eEEEEEeECCCCChHHHHhhcCCCC
Confidence            457899999999999999999999999999987655555555667776542    3456655432211 1     23568


Q ss_pred             ceEEEEEECCHHHHHHHHHHcCCeeeeC-CccCCCCceEEEEE--ECCCCcEEEEEecCCC
Q 022831           93 FGHLAIATEDVYKMVENIRAKGGNVTRE-PGPLKGMTTHFAFV--KDPDGYIFELIQRGPT  150 (291)
Q Consensus        93 ~~~i~~~v~d~~~~~~~l~~~G~~~~~~-~~~~~~g~~~~~~~--~dP~G~~iel~~~~~~  150 (291)
                      +.|++|.|+|+++++++|+++|+++..+ +....+|.+ ++|+  +||+|+.|||++....
T Consensus        80 ~~Hiaf~V~Did~~~~~l~~~G~~~~~~~~~~~~~g~~-~~f~~~~DPdG~~iEl~~~~~~  139 (161)
T 3oa4_A           80 IHHIAIGVKSIEERIQEVKENGVQMINDEPVPGARGAQ-VAFLHPRSARGVLYEFCEKKEQ  139 (161)
T ss_dssp             EEEEEEECSCHHHHHHHHHHTTCCBSCSSCEECGGGCE-EEEBCGGGTTTCCEEEEECCCC
T ss_pred             eEEEEEEECCHHHHHHHHHHCCCEecccCcccCCCCcE-EEEEeccCCCeEEEEEEecCCc
Confidence            8999999999999999999999998766 554444544 4666  4999999999998754

>2c21_A Trypanothione-dependent glyoxalase I; lyase, glutathionylspermidine, methylglyoxal, detoxification; 2.0A {Leishmania major} SCOP: d.32.1.1

Probab=99.79  E-value=3.1e-18  Score=129.62  Aligned_cols=124  Identities=41%  Similarity=0.670  Sum_probs=92.9

Q ss_pred             CCceeeeeeeCCchhhHHHHHHhcCCeeeeeccCcccceeeeeeccCCCCcceEEEEeEecCceeeccCceeeEEEEEec
Q 022831          152 EPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAISTD  231 (291)
Q Consensus       152 ~~~~hv~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~~hia~~v~  231 (291)
                      .++.|+.|.|+|++++.+||+++|||++......+++.+...++..++......|+|.........+.+.+.+|++|.|+
T Consensus         7 ~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~l~~~~~~~~~~~~~~~~h~~f~v~   86 (144)
T 2c21_A            7 RRMLHTMIRVGDLDRSIKFYTERLGMKVLRKWDVPEDKYTLVFLGYGPEMSSTVLELTYNYGVTSYKHDEAYGHIAIGVE   86 (144)
T ss_dssp             CEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEEGGGTEEEEEEESSCTTTSCEEEEEEETTCCCCCCCSSEEEEEEEES
T ss_pred             ceeEEEEEEeCCHHHHHHHHHhcCCCEEEEeeecCCCCeEEEEEEcCCCCCceEEEEEecCCCCCCCCCCCceEEEEEeC
Confidence            56899999999999999999999999987764434444555566654321245677766543222334568899999999


Q ss_pred             ChHHHHHHHHHHHHhhCCeeeecccccCCCCceEEEEECCCCCeEEEEechhh
Q 022831          232 DVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNEDF  284 (291)
Q Consensus       232 di~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~~~  284 (291)
                      |++++++++    +++|+++..+    .+ ...++||+|||||.|||+++.+.
T Consensus        87 d~~~~~~~l----~~~G~~~~~~----~g-~~~~~~~~DPdG~~iel~~~~~~  130 (144)
T 2c21_A           87 DVKELVADM----RKHDVPIDYE----DE-SGFMAFVVDPDGYYIELLNEKTM  130 (144)
T ss_dssp             CHHHHHHHH----HHTTCCEEEE----CS-SSSEEEEECTTSCEEEEEEHHHH
T ss_pred             CHHHHHHHH----HHCCCEEecc----CC-cEEEEEEECCCCCEEEEEEcCch
Confidence            999999999    9999998765    22 22345999999999999997653

>3e5d_A Putative glyoxalase I; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, lyase; 2.70A {Listeria monocytogenes str}

Probab=99.79  E-value=1.3e-18  Score=128.46  Aligned_cols=119  Identities=20%  Similarity=0.240  Sum_probs=93.3

Q ss_pred             CceeeeeeeCCchhhHHHHHHhcCCeeeeeccCcccceeeeeeccCCCCcceEEEEeEecCcee--eccCceeeEEEEEe
Q 022831          153 PLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTE--YTKGNAYAQVAIST  230 (291)
Q Consensus       153 ~~~hv~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~--~~~~~g~~hia~~v  230 (291)
                      ++.|+.|.|+|++++.+||+++|||++......++.++...++..++   ...++|.......+  ...+.|++|++|.|
T Consensus         3 ~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~---~~~l~l~~~~~~~~~~~~~~~g~~hi~~~v   79 (127)
T 3e5d_A            3 KIEHVALWTTNLEQMKQFYVTYFGATANDLYENKTKGFNSYFLSFED---GARLEIMSRTDVTGKTTGENLGWAHIAIST   79 (127)
T ss_dssp             CCCEEEEECSSHHHHHHHHHHHHCCEECCCEEEGGGTEEEEEEECSS---SCEEEEEEETTCCCCCCSSCSSCCCEEEEC
T ss_pred             EEEEEEEEECCHHHHHHHHHHhcCCeeecccccCCCCccEEEEEcCC---CcEEEEEecCCCCCCCCcCCCceEEEEEEc
Confidence            58999999999999999999999999877654444445666666432   36677766543321  12356789999999


Q ss_pred             cC---hHHHHHHHHHHHHhhCCeeeecccccCCCCceEEEEECCCCCeEEEE
Q 022831          231 DD---VYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLV  279 (291)
Q Consensus       231 ~d---i~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iel~  279 (291)
                      +|   ++++++++    +++|+++..+|...+. +.+.+||+|||||.|||+
T Consensus        80 ~d~~~v~~~~~~l----~~~G~~~~~~~~~~~~-g~~~~~~~DPdG~~iel~  126 (127)
T 3e5d_A           80 GTKEAVDELTEKL----RQDGFAIAGEPRMTGD-GYYESVVLDPEGNRIEIT  126 (127)
T ss_dssp             SSHHHHHHHHHHH----HHTTCCEEEEEEECTT-SCEEEEEECTTSCEEEEE
T ss_pred             CCHHHHHHHHHHH----HHcCCeEecCcccCCC-CcEEEEEECCCCCEEEEe
Confidence            99   88999999    9999999988876554 467899999999999997

>1jc4_A Methylmalonyl-COA epimerase; vicinal oxygen chelate superfamily, isomerase; 2.00A {Propionibacterium freudenreichiisubsp} SCOP: d.32.1.4 PDB: 1jc5_A

Probab=99.79  E-value=2.7e-18  Score=130.20  Aligned_cols=129  Identities=22%  Similarity=0.337  Sum_probs=95.3

Q ss_pred             CCccceeeEEEEeCCHHHHHHHHHHhcCCEEEEEeccCCCceeeEEeeccCC--CcceEEEeeecCCCC-c-----ccCC
Q 022831           19 KDKRRLLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPE--QSYFVVELTYNYGVT-S-----YDIG   90 (291)
Q Consensus        19 ~~~~~i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~l~l~~~~~~~-~-----~~~g   90 (291)
                      .|+.+|+|+.|.|+|++++++||+++|||++......++.+...+++..+..  .....+++.+..... +     ...+
T Consensus         5 ~m~~~~~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~   84 (148)
T 1jc4_A            5 DLFICIDHVAYACPDADEASKYYQETFGWHELHREENPEQGVVEIMMAPAAKLTEHMTQVQVMAPLNDESTVAKWLAKHN   84 (148)
T ss_dssp             CCCSEEEEEEEECSCHHHHHHHHHHHHCCEEEEEEEETTTTEEEEEEESSSSCCTTCCEEEEEEESSTTSHHHHHHHHTT
T ss_pred             CccceeeEEEEEeCCHHHHHHHHHHccCceeeecccCCCCCeEEEEEEcCCCCcCcceEEEEeecCCCCChHHHHHHhCC
Confidence            4789999999999999999999999999999876544444445667765431  112456666543221 1     1233


Q ss_pred             --CCceEEEEEECCHHHHHHHHHHcCCeee-eCCccCCCCceEEEEE--ECCCCcEEEEEecC
Q 022831           91 --TGFGHLAIATEDVYKMVENIRAKGGNVT-REPGPLKGMTTHFAFV--KDPDGYIFELIQRG  148 (291)
Q Consensus        91 --~~~~~i~~~v~d~~~~~~~l~~~G~~~~-~~~~~~~~g~~~~~~~--~dP~G~~iel~~~~  148 (291)
                        .+..|++|.|+|+++++++|+++|+++. ..|....+|.+ ++|+  +||+|+.|||++.+
T Consensus        85 ~~~g~~h~~~~v~d~~~~~~~l~~~G~~~~~~~p~~~~~g~~-~~~~~~~DPdG~~iel~~~~  146 (148)
T 1jc4_A           85 GRAGLHHMAWRVDDIDAVSATLRERGVQLLYDEPKLGTGGNR-INFMHPKSGKGVLIELTQYP  146 (148)
T ss_dssp             TCCEEEEEEEECSCHHHHHHHHHHHTCCBSCSSCEECSSSCE-EEEBCGGGGTTSCEEEEECC
T ss_pred             CCCceEEEEEECCCHHHHHHHHHHCCCeecCcCcccCCCceE-EEEEeecCCCcEEEEEEecC
Confidence              5788999999999999999999999987 44554445543 4666  99999999999865

>3hdp_A Glyoxalase-I; glutathione,lyase, methylglyoxal,11003P,PSI2, structural GENOMIC,NYSGXRC., structural genomics; 2.06A {Clostridium acetobutylicum} PDB: 2qh0_A

Probab=99.78  E-value=9.8e-19  Score=130.38  Aligned_cols=121  Identities=16%  Similarity=0.166  Sum_probs=90.1

Q ss_pred             CCceeeeeeeCCchhhHHHHHHhcCCeeeeec-cCcccceeeeeeccCCCCcceEEEEeEecCcee-e----ccCceeeE
Q 022831          152 EPLCQVMLRVGDLGRSIKFYEKALGMKLLRTI-DSPELKCALAMLGYAEEDQTTVLELAYSYGVTE-Y----TKGNAYAQ  225 (291)
Q Consensus       152 ~~~~hv~l~v~D~~~~~~Fy~~~lG~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~-~----~~~~g~~h  225 (291)
                      .+++|+.|.|+|++++.+||+ +|||++.... ..+.......++..+    ...++|........ .    ..+.|++|
T Consensus         6 ~~i~hv~i~v~Dl~~a~~FY~-~lG~~~~~~~~~~~~~~~~~~~~~~~----~~~l~l~~~~~~~~~~~~~~~~~~g~~h   80 (133)
T 3hdp_A            6 LKVHHIGYAVKNIDSALKKFK-RLGYVEESEVVRDEVRKVYIQFVING----GYRVELVAPDGEDSPINKTIKKGSTPYH   80 (133)
T ss_dssp             CCEEEEEEECSCHHHHHHHHH-HTTCEECSCCEEETTTTEEEEEEEET----TEEEEEEEESSTTCTHHHHTTTSCEEEE
T ss_pred             eeeCEEEEEECCHHHHHHHHH-HcCCeeecceeccCCcceEEEEEeCC----CEEEEEEecCCCCChHHHHHhcCCceEE
Confidence            569999999999999999999 9999986542 112233445555533    35677766433211 0    11578999


Q ss_pred             EEEEecChHHHHHHHHHHHHhhCCeeeeccccc-CCCCceEEEEECCCCCeEEEEec
Q 022831          226 VAISTDDVYKSAEVVNLVTQELGGKITRQPGPI-PGLNTKITSFVDPDGWKTVLVDN  281 (291)
Q Consensus       226 ia~~v~di~~~~~~l~~~~~~~G~~~~~~p~~~-~~~~~~~~~~~DPdG~~iel~~~  281 (291)
                      ++|.|+|++++++++    +++|+++..+|... ...+.+++|++|||||+|||+|+
T Consensus        81 iaf~v~di~~~~~~l----~~~G~~~~~~p~~~~~~~g~~~~~~~dPdG~~iEl~e~  133 (133)
T 3hdp_A           81 ICYEVEDIQKSIEEM----SQIGYTLFKKAEIAPAIDNRKVAFLFSTDIGLIELLEK  133 (133)
T ss_dssp             EEEEESCHHHHHHHH----TTTTEEEEEEEEEEGGGTTEEEEEEEETTTEEEEEEEC
T ss_pred             EEEEcCCHHHHHHHH----HHcCCccccCCeecccCCCceEEEEECCCceEEEEecC
Confidence            999999999999999    99999998875432 22246889999999999999984

>3l7t_A SMU.1112C, putative uncharacterized protein; metal binding protein; 1.80A {Streptococcus mutans}

Probab=99.78  E-value=2.7e-18  Score=127.62  Aligned_cols=120  Identities=23%  Similarity=0.282  Sum_probs=90.7

Q ss_pred             CCceeeeeeeCCchhhHHHHHHhcCCeeeeeccCcccceeeeeeccCCCCcceEEEEeE-------ecCce---eec-cC
Q 022831          152 EPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAY-------SYGVT---EYT-KG  220 (291)
Q Consensus       152 ~~~~hv~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~-------~~~~~---~~~-~~  220 (291)
                      .+++|+.|.|+|++++.+||+++|||++......++......++..+    ...+++..       .....   ..+ .+
T Consensus         4 ~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~----~~~l~l~~~~~~~~~~~~~~~~~~~~~~~   79 (134)
T 3l7t_A            4 KAVHHVALIVSDYDKSYEFYVNQLGFEVIRENHRPKRHDYKLDLKCG----DIELEIFGNKLTDSNYCAPPERISWPREA   79 (134)
T ss_dssp             CEEEEEEEECSCHHHHHHHHHHTSCCEEEEEEEETTTTEEEEEEEET----TEEEEEEECCTTSTTCCCCCCCCCSSSCC
T ss_pred             eeEeEEEEEeCCHHHHHHHHHHhcCCEEEEEeecCCCcceEEEEecC----CeEEEEEecccccccccCCccccCCCCCC
Confidence            46899999999999999999999999988765433333334445533    24666665       21111   122 35


Q ss_pred             ceeeEEEEEecChHHHHHHHHHHHHhhCCeeeecccccCCCCceEEEEECCCCCeEEEEe
Q 022831          221 NAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVD  280 (291)
Q Consensus       221 ~g~~hia~~v~di~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iel~~  280 (291)
                      .|..|++|.|+|++++++++    +++|+++...|...++ +.+.+|++|||||.|||+|
T Consensus        80 ~g~~~~~~~v~d~~~~~~~l----~~~G~~~~~~~~~~~~-g~~~~~~~DPdG~~iel~e  134 (134)
T 3l7t_A           80 CGLRHLAFYVEDVEASRQEL----IALGIRVEEVRYDDYT-GKKMAFFFDPDGLPLELHE  134 (134)
T ss_dssp             SEEEEEEEECSCHHHHHHHH----HHHTCCCCCCEECTTS-CCEEEEEECTTCCEEEEEC
T ss_pred             CCeEEEEEEECCHHHHHHHH----HhCCCcccceeccCCC-ceEEEEEECCCCCEEEEeC
Confidence            68899999999999999999    9999998876665443 4688999999999999986

>1ss4_A Glyoxalase family protein; structural genomics, PSI, prote structure initiative, midwest center for structural genomic unknown function; HET: CIT GSH; 1.84A {Bacillus cereus} SCOP: d.32.1.6

Probab=99.78  E-value=6.8e-18  Score=128.73  Aligned_cols=126  Identities=17%  Similarity=0.232  Sum_probs=92.2

Q ss_pred             CCccceeeEEEEeCCHHHHHHHHHHhcCCEEEEEecc-----------CCCceeeEEeeccCCCcceEEEeeec--CCCC
Q 022831           19 KDKRRLLHAVYRVGDLDRTIKYYTECFGMELLRKRDV-----------PEEKYSNAFLGFGPEQSYFVVELTYN--YGVT   85 (291)
Q Consensus        19 ~~~~~i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~l~l~~~--~~~~   85 (291)
                      +++++|+|+.|.|+|++++.+||++ |||++......           ++.....+++..+..  ...+++...  ....
T Consensus         7 ~~~~~i~hv~l~v~D~~~a~~FY~~-lG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g--~~~l~l~~~~~~~~~   83 (153)
T 1ss4_A            7 NKLLRMDNVSIVVESLDNAISFFEE-IGLNLEGRANVEGEWAGRVTGLGSQCVEIAMMVTPDG--HSRIELSRFLTPPTI   83 (153)
T ss_dssp             CCEEEEEEEEEECSCHHHHHHHHHH-HTCEEEEEEEECSHHHHHHHSCCSCEEEEEEEECTTS--SCEEEEEEEEESCCC
T ss_pred             ccccceeeEEEEeCCHHHHHHHHHH-CCCEEEeeccCCcchhheeeCCCCCcEEEEEEECCCC--CcEEEEEEecCCCCc
Confidence            4678999999999999999999999 99999765332           112334566665432  234444432  1111


Q ss_pred             -----cccCCCCceEEEEEECCHHHHHHHHHHcCCeeeeCCccCCCCceEEEEEECCCCcEEEEEecC
Q 022831           86 -----SYDIGTGFGHLAIATEDVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFELIQRG  148 (291)
Q Consensus        86 -----~~~~g~~~~~i~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dP~G~~iel~~~~  148 (291)
                           ....+.++.|++|.|+|+++++++|+++|+++..++...++|.+ .+|++||+|+.|||++..
T Consensus        84 ~~~~~~~~~~~g~~hl~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~g~~-~~~~~DPdG~~iel~~~~  150 (153)
T 1ss4_A           84 ADHRTAPVNALGYLRVMFTVEDIDEMVSRLTKHGAELVGEVVQYENSYR-LCYIRGVEGILIGLAEEL  150 (153)
T ss_dssp             CBCTTCCSSSBEEEEEEEEESCHHHHHHHHHHTTCEESSCCEEETTTEE-EEEEECGGGCEEEEEEEC
T ss_pred             ccccCCCCCCCceEEEEEEeCCHHHHHHHHHHCCCeecCCCcccCCceE-EEEEECCCCCEEEEEecc
Confidence                 11234467899999999999999999999998877766666544 588999999999999864

>3huh_A Virulence protein STM3117; structural genomics, nysgrc, target 13955A1BCT15P1, dioxygen virulence, PSI-2, protein structure initiative; 1.50A {Salmonella enterica subsp} PDB: 3hnq_A

Probab=99.78  E-value=4e-18  Score=130.19  Aligned_cols=126  Identities=23%  Similarity=0.319  Sum_probs=88.7

Q ss_pred             cCCcCCccceeeEEEEeCCHHHHHHHHHHhcCCEEEEEeccCCCceeeEEeeccCCCcceEEEeeecCC---CCcccCCC
Q 022831           15 EWPKKDKRRLLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYG---VTSYDIGT   91 (291)
Q Consensus        15 ~~~~~~~~~i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~---~~~~~~g~   91 (291)
                      +...|++.+|+||.|.|+|++++++||+++|||++....   + .  ..++..+.    ..+.+.....   ........
T Consensus        15 ~~~~m~i~~l~hv~l~v~D~~~a~~FY~~vLG~~~~~~~---~-~--~~~l~~~~----~~l~l~~~~~~~~~~~~~~~~   84 (152)
T 3huh_A           15 ESIQMIIDRIDHLVLTVSDISTTIRFYEEVLGFSAVTFK---Q-N--RKALIFGA----QKINLHQQEMEFEPKASRPTP   84 (152)
T ss_dssp             -----CEEEEEEEEEEESCHHHHHHHHHHTTCCEEEEET---T-T--EEEEEETT----EEEEEEETTBCCSSCCSSCCT
T ss_pred             hcCCcccceeeEEEEEeCCHHHHHHHHHhcCCCEEEEcc---C-C--eEEEEeCC----eEEEEeccCCcCCCcCcCCCC
Confidence            334467899999999999999999999999999998752   1 1  45555442    2344443221   11222345


Q ss_pred             CceEEEEEEC-CHHHHHHHHHHcCCeeeeCCccCCCC--ceEEEEEECCCCcEEEEEecCCC
Q 022831           92 GFGHLAIATE-DVYKMVENIRAKGGNVTREPGPLKGM--TTHFAFVKDPDGYIFELIQRGPT  150 (291)
Q Consensus        92 ~~~~i~~~v~-d~~~~~~~l~~~G~~~~~~~~~~~~g--~~~~~~~~dP~G~~iel~~~~~~  150 (291)
                      +..|++|.+. |+++++++|+++|+++..+|...+++  ....+|++||+||.|||.+..+.
T Consensus        85 g~~hi~f~~~~dl~~~~~~l~~~G~~~~~~p~~~~~~~g~~~~~~~~DPdG~~iEl~~~~~~  146 (152)
T 3huh_A           85 GSADLCFITSTPINDVVSEILQAGISIVEGPVERTGATGEIMSIYIRDPDGNLIEISQYVEG  146 (152)
T ss_dssp             TCCEEEEEESSCHHHHHHHHHHTTCCCSEEEEEEEETTEEEEEEEEECTTCCEEEEEEC---
T ss_pred             CccEEEEEecCCHHHHHHHHHHCCCeEecCCccccCCCCcEEEEEEECCCCCEEEEEecccC
Confidence            7889999997 99999999999999987766544433  23568899999999999987643

>3ey7_A Biphenyl-2,3-DIOL 1,2-dioxygenase III-related protein; integron cassette protein mobIle metagenome structural genomics, oxidoreductase, PSI-2; HET: MSE; 1.60A {Vibrio cholerae} PDB: 3ey8_A*

Probab=99.78  E-value=5.8e-18  Score=125.89  Aligned_cols=120  Identities=20%  Similarity=0.331  Sum_probs=89.8

Q ss_pred             CCccceeeEEEEeCCHHHHHHHHHHhcCCEEEEEeccCCCceeeEEeeccCCCcceEEEeeecCC---CCcccCCCCceE
Q 022831           19 KDKRRLLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYG---VTSYDIGTGFGH   95 (291)
Q Consensus        19 ~~~~~i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~---~~~~~~g~~~~~   95 (291)
                      |++.+|+|+.|.|+|++++++||+++|||++....   . .  ..++..+.    ..+.+.....   ......+.+..|
T Consensus         6 m~~~~i~hi~l~v~D~~~a~~FY~~~lG~~~~~~~---~-~--~~~~~~~~----~~~~l~~~~~~~~~~~~~~~~~~~~   75 (133)
T 3ey7_A            6 MKISHLDHLVLTVADIPTTTNFYEKVLGMKAVSFG---A-G--RIALEFGH----QKINLHQLGNEFEPKAQNVRVGSAD   75 (133)
T ss_dssp             CCCCEEEEEEEEESCHHHHHHHHHHHHCCEEEEET---T-T--EEEEEETT----EEEEEEETTSCCSSCCTTCCTTCCE
T ss_pred             eEecccCEEEEEECCHHHHHHHHHHccCceEEEec---C-C--eEEEEcCC----EEEEEEcCCCCccccCCCCCCCccE
Confidence            67899999999999999999999999999998652   1 1  44555432    2344443221   112224557899


Q ss_pred             EEEEECC-HHHHHHHHHHcCCeeeeCCccCCCC--ceEEEEEECCCCcEEEEEecC
Q 022831           96 LAIATED-VYKMVENIRAKGGNVTREPGPLKGM--TTHFAFVKDPDGYIFELIQRG  148 (291)
Q Consensus        96 i~~~v~d-~~~~~~~l~~~G~~~~~~~~~~~~g--~~~~~~~~dP~G~~iel~~~~  148 (291)
                      ++|.|+| +++++++|+++|+++..+|...+++  ....++++||+|+.|||++..
T Consensus        76 ~~~~v~dd~~~~~~~l~~~G~~~~~~~~~~~~~~g~~~~~~~~DPdG~~iel~~~~  131 (133)
T 3ey7_A           76 LCFITDTVLSDAMKHVEDQGVTIMEGPVKRTGAQGAITSFYFRDPDGNLIEVSTYS  131 (133)
T ss_dssp             EEEECSSCHHHHHHHHHHTTCCCCEEEEEEEETTEEEEEEEEECTTCCEEEEEESC
T ss_pred             EEEEeCcHHHHHHHHHHHCCCccccCCccccCCCCCeEEEEEECCCCCEEEEEecC
Confidence            9999997 9999999999999988766544432  225688999999999999875

>3ghj_A Putative integron gene cassette protein; integron cassette protein, mobIle metagenome, structural genomics, PSI-2; 1.47A {Uncultured bacterium}

Probab=99.77  E-value=1e-17  Score=126.40  Aligned_cols=115  Identities=19%  Similarity=0.254  Sum_probs=85.8

Q ss_pred             CCccceeeEEEEeCCHHHHHHHHHHhcCCEEEEEeccCCCceeeEEeeccCCCcceEEEeeecCCCCcccCCCCceEEEE
Q 022831           19 KDKRRLLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHLAI   98 (291)
Q Consensus        19 ~~~~~i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~g~~~~~i~~   98 (291)
                      |++.+|+||.|.|+|++++++||+++|||++......  ..  ..++..+.  ....+.+....      ...+..|++|
T Consensus        24 m~i~~i~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~~~--~~--~~~~~~~~--~~~~l~l~~~~------~~~~~~h~~~   91 (141)
T 3ghj_A           24 MNIKGLFEVAVKVKNLEKSSQFYTEILGFEAGLLDSA--RR--WNFLWVSG--RAGMVVLQEEK------ENWQQQHFSF   91 (141)
T ss_dssp             --CCCCCEEEEEESCHHHHHHHHHHTSCCEEEEEETT--TT--EEEEEETT--TTEEEEEEECC------SSCCCCEEEE
T ss_pred             eeeceecEEEEEeCCHHHHHHHHHHhcCCEEEEecCC--Cc--EEEEEecC--CCcEEEEeccC------CCCCCceEEE
Confidence            5789999999999999999999999999999876432  22  45555443  23456665542      1235679999


Q ss_pred             EEC--CHHHHHHHHHHcCCeeeeCCccCCCCceEEEEEECCCCcEEEEEe
Q 022831           99 ATE--DVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFELIQ  146 (291)
Q Consensus        99 ~v~--d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dP~G~~iel~~  146 (291)
                      .|+  |+++++++|+++|+++..+ ....++....+||+||||+.|||+.
T Consensus        92 ~v~~~dld~~~~~l~~~G~~~~~~-~~~~~~~~~~~~~~DPdG~~iel~~  140 (141)
T 3ghj_A           92 RVEKSEIEPLKKALESKGVSVHGP-VNQEWMQAVSLYFADPNGHALEFTA  140 (141)
T ss_dssp             EECGGGHHHHHHHHHHTTCCCEEE-EEEGGGTEEEEEEECTTCCEEEEEE
T ss_pred             EEeHHHHHHHHHHHHHCCCeEeCC-cccCCCCceEEEEECCCCCEEEEEE
Confidence            997  9999999999999998743 3333333446899999999999985

>4hc5_A Glyoxalase/bleomycin resistance protein/dioxygena; MCSG, GEBA genomes, structural genomics, midwest center for structural genomics; HET: MSE GOL; 1.45A {Sphaerobacter thermophilus}

Probab=99.77  E-value=6.2e-18  Score=125.76  Aligned_cols=123  Identities=20%  Similarity=0.279  Sum_probs=91.6

Q ss_pred             CCCceeeeeeeCCchhhHHHHHHhcCCeeeeeccCcccceeeeeeccCCCCcceEEEEeEecCceeeccCceeeEEEEEe
Q 022831          151 PEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAIST  230 (291)
Q Consensus       151 ~~~~~hv~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~~hia~~v  230 (291)
                      ..++.|+.|.|+|++++.+||+++|||++......+++ .....+..++  ....+.+.............+..|++|.|
T Consensus        11 ~~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~-~~~~~~~~~~--~~~~l~l~~~~~~~~~~~~~~~~~~~~~v   87 (133)
T 4hc5_A           11 IAYVHSATIIVSDQEKALDFYVNTLGFEKVFDNQLDPN-MRFVTVVPPG--AQTQVALGLPSWYEDGRKPGGYTGISLIT   87 (133)
T ss_dssp             CCEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEEETT-EEEEEEECTT--CSCEEEEECGGGCSSCCCSCEEEEEEEEE
T ss_pred             ccceeEEEEEECCHHHHHHHHHhCcCCcEeeecccCCC-ceEEEEECCC--CceEEEEecCcccccccCCCCeEEEEEEe
Confidence            35799999999999999999999999998876432221 2333343222  23556665533111111235789999999


Q ss_pred             cChHHHHHHHHHHHHhhCCeeeecccccCCCCceEEEEECCCCCeEEEEec
Q 022831          231 DDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDN  281 (291)
Q Consensus       231 ~di~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iel~~~  281 (291)
                      +|++++++++    +++|+++..+|...+. +.+.++|+|||||.|||+|.
T Consensus        88 ~d~~~~~~~l----~~~G~~~~~~~~~~~~-g~~~~~~~DP~G~~~el~ee  133 (133)
T 4hc5_A           88 RDIDEAYKTL----TERGVTFTKPPEMMPW-GQRATWFSDPDGNQFFLVEE  133 (133)
T ss_dssp             SCHHHHHHHH----HHTTCEESSSCEECTT-SCEEEEEECTTCEEEEEEEC
T ss_pred             CCHHHHHHHH----HHCCCEeecCCCcCCC-CCEEEEEECCCCCEEEEEeC
Confidence            9999999999    9999999988887776 44899999999999999973

>3oa4_A Glyoxalase, BH1468 protein; structural genomics, protein structure initiative, glyoxalas PSI-biology, lyase; 1.94A {Bacillus halodurans}

Probab=99.76  E-value=2.7e-18  Score=132.57  Aligned_cols=125  Identities=18%  Similarity=0.283  Sum_probs=94.6

Q ss_pred             CCCceeeeeeeCCchhhHHHHHHhcCCeeeeeccCcccceeeeeeccCCCCcceEEEEeEecCcee------eccCceee
Q 022831          151 PEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTE------YTKGNAYA  224 (291)
Q Consensus       151 ~~~~~hv~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~------~~~~~g~~  224 (291)
                      ..+|+|+.|.|+|++++.+||+++|||++......++......++..+    ...|+|........      ...+.|++
T Consensus         6 ~~~i~Hv~l~V~Dl~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~g----~~~l~l~~~~~~~~~~~~~~~~~~~g~~   81 (161)
T 3oa4_A            6 SNKLDHIGIAVTSIKDVLPFYVGSLKLKLLGMEDLPSQGVKIAFLEIG----ESKIELLEPLSEESPIAKFIQKRGEGIH   81 (161)
T ss_dssp             CCEEEEEEEECSCHHHHHHHHHHTSCCEEEEEEEEGGGTEEEEEEEET----TEEEEEEEESSTTSHHHHHHHHHCSEEE
T ss_pred             cCcCCEEEEEECCHHHHHHHHHHccCCeEeeeeccCCCCeEEEEEeCC----CeEEEEEeECCCCChHHHHhhcCCCCeE
Confidence            357999999999999999999999999987765444444566666643    35677766432211      12356899


Q ss_pred             EEEEEecChHHHHHHHHHHHHhhCCeeeec-ccccCCCCceEEEE--ECCCCCeEEEEechhh
Q 022831          225 QVAISTDDVYKSAEVVNLVTQELGGKITRQ-PGPIPGLNTKITSF--VDPDGWKTVLVDNEDF  284 (291)
Q Consensus       225 hia~~v~di~~~~~~l~~~~~~~G~~~~~~-p~~~~~~~~~~~~~--~DPdG~~iel~~~~~~  284 (291)
                      |++|.|+|+++++++|    +++|+++..+ |...+ .+.+++|+  +|||||+|||+++.+.
T Consensus        82 Hiaf~V~Did~~~~~l----~~~G~~~~~~~~~~~~-~g~~~~f~~~~DPdG~~iEl~~~~~~  139 (161)
T 3oa4_A           82 HIAIGVKSIEERIQEV----KENGVQMINDEPVPGA-RGAQVAFLHPRSARGVLYEFCEKKEQ  139 (161)
T ss_dssp             EEEEECSCHHHHHHHH----HHTTCCBSCSSCEECG-GGCEEEEBCGGGTTTCCEEEEECCCC
T ss_pred             EEEEEECCHHHHHHHH----HHCCCEecccCcccCC-CCcEEEEEeccCCCeEEEEEEecCCc
Confidence            9999999999999999    9999998776 44333 24567777  4999999999998654

>3kol_A Oxidoreductase, glyoxalase/bleomycin resistance protein/dioxygenase; metal ION binding, NYSGXRC, PSI2, structural genomics; 1.90A {Nostoc punctiforme pcc 73102}

Probab=99.76  E-value=7.5e-18  Score=128.82  Aligned_cols=128  Identities=18%  Similarity=0.181  Sum_probs=93.1

Q ss_pred             CcCCccceeeEEEEeCCHHHHHHHHHHhcCCEEEEEeccCC------CceeeEEeeccCCCcceEEEeeecCCCC-----
Q 022831           17 PKKDKRRLLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPE------EKYSNAFLGFGPEQSYFVVELTYNYGVT-----   85 (291)
Q Consensus        17 ~~~~~~~i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~l~l~~~~~~~-----   85 (291)
                      +.+++++|+||.|.|+|++++++||+++|||++......+.      ..-...++..+.   ...+++.......     
T Consensus        13 ~~~~~~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~l~l~~~~~~~~~~~~   89 (156)
T 3kol_A           13 APGNLRKVHHIALNVQDMQASRYFYGTILGLHELTDDEVPATLTELVASGKVANFITPD---GTILDLFGEPELSPPDPN   89 (156)
T ss_dssp             CTTSSCCCCEEEEEESCHHHHHHHHTTTSCCEECCTTTSCTTTHHHHHTTSEEEEECTT---SCEEEEEECTTCCCSSSS
T ss_pred             CccccceEeEEEEEeCCHHHHHHHHHhhcCCEEEeecccCcchhcccCCCcEEEEEeCC---CCEEEEEecCCCCcCCCC
Confidence            44688999999999999999999999999999875322110      001235555432   2345555433211     


Q ss_pred             cccCCCCceEEEEEEC--CHHHHHHHHHHcCCeeeeCCccCCCCceEEEEEECCCCcEEEEEecCC
Q 022831           86 SYDIGTGFGHLAIATE--DVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFELIQRGP  149 (291)
Q Consensus        86 ~~~~g~~~~~i~~~v~--d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dP~G~~iel~~~~~  149 (291)
                      ......+..|++|.|+  |+++++++|+++|+++...+....+|.  .+|++||+|+.|||++...
T Consensus        90 ~~~~~~~~~h~~~~v~~~d~~~~~~~l~~~G~~~~~~~~~~~~g~--~~~~~DPdG~~iel~~~~~  153 (156)
T 3kol_A           90 PEKTFTRAYHLAFDIDPQLFDRAVTVIGENKIAIAHGPVTRPTGR--GVYFYDPDGFMIEIRCDPE  153 (156)
T ss_dssp             TTCCCSSCCEEEEECCGGGHHHHHHHHHHTTCCEEEEEEEC-CCE--EEEEECTTSCEEEEEECCC
T ss_pred             CCCCCCceEEEEEEecHHHHHHHHHHHHHCCCccccCceecCCcc--EEEEECCCCCEEEEEecCC
Confidence            1123457899999998  999999999999999887777666653  5899999999999998754

>3gm5_A Lactoylglutathione lyase and related lyases; sheet-helix-sheet-sheet-sheet motif, isomerase; HET: CIT; 2.00A {Thermoanaerobacter tengcongensis}

Probab=99.76  E-value=5.2e-18  Score=130.56  Aligned_cols=126  Identities=22%  Similarity=0.320  Sum_probs=93.7

Q ss_pred             cCCcCCccceeeEEEEeCCHHHHHHHHHHhcCCEEEEEeccC--------------CCceeeEEeeccCCCcceEEEeee
Q 022831           15 EWPKKDKRRLLHAVYRVGDLDRTIKYYTECFGMELLRKRDVP--------------EEKYSNAFLGFGPEQSYFVVELTY   80 (291)
Q Consensus        15 ~~~~~~~~~i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~l~l~~   80 (291)
                      ..+.+++++|+||+|.|+|++++++||+++|||++......+              ......+++..+    ...++|.+
T Consensus        11 ~~~~~~~~~i~Hv~i~V~Dle~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~g----~~~leL~~   86 (159)
T 3gm5_A           11 SKNILDMRNTVQIGIVVRDIEESLQNYAEFFGVEKPQWFWTDDYSKAHTKFNGRPTKARAKLAFFELG----PLQLELIE   86 (159)
T ss_dssp             CSSCCCGGGCEEEEEECSCHHHHHHHHHHHTTCCCCCCEECCCHHHHCCEETTEECCCCEEEEEEEET----TEEEEEEE
T ss_pred             cccccccccccEEEEEeCCHHHHHHHHHHhhCCCCceEEecCCcccccceeecccccceEEEEEEecC----CEEEEEEE
Confidence            344568899999999999999999999999999976543322              134455666543    24566665


Q ss_pred             cCCCCc-c-----cCCCCceEEEEEECCHHHHHHHHHHcCCeeeeCCccCCCCceEEEEEECCC--CcEEEEEec
Q 022831           81 NYGVTS-Y-----DIGTGFGHLAIATEDVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPD--GYIFELIQR  147 (291)
Q Consensus        81 ~~~~~~-~-----~~g~~~~~i~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dP~--G~~iel~~~  147 (291)
                      ...... .     ..+.|+.||||.|+|+++++++|+++|+++...+. . +| ..++|+.|||  |+.|||++.
T Consensus        87 ~~~~~~~~~~~l~~~~~g~~Hiaf~v~di~~~~~~l~~~G~~~~~~~~-~-~g-~~~~~~~dpd~~G~~iEl~e~  158 (159)
T 3gm5_A           87 PDENPSTWREFLDKNGEGIHHIAFVVKDMDRKVEELYRKGMKVIQKGD-F-EG-GRYAYIDTLRALKVMIELLEN  158 (159)
T ss_dssp             ECSSSCHHHHHHHHHCSEEEEEEEECSCHHHHHHHHHHTTCCEEEEEE-E-TT-EEEEEESCHHHHSSEEEEEEE
T ss_pred             ECCCCChhHHHhhcCCceEEEEEEEcCCHHHHHHHHHHCCCcEeeccc-c-CC-eeEEEEeccccCcEEEEEEec
Confidence            433221 1     13568999999999999999999999999876542 2 23 4568999999  999999985

>2za0_A Glyoxalase I; lyase, lactoylglutathione lyase, methyl- gerfelin; HET: MGI; 1.70A {Mus musculus} PDB: 1qip_A* 1fro_A* 1qin_A* 1bh5_A*

Probab=99.75  E-value=1.6e-17  Score=131.08  Aligned_cols=130  Identities=28%  Similarity=0.543  Sum_probs=96.3

Q ss_pred             CCCceeeeeeeCCchhhHHHHHHhcCCeeeeeccCcccceeeeeeccCCC---------------CcceEEEEeEecCce
Q 022831          151 PEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEE---------------DQTTVLELAYSYGVT  215 (291)
Q Consensus       151 ~~~~~hv~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~l~l~~~~~~~  215 (291)
                      ..++.|+.|.|+|++++.+||+++|||++......++..+..++++.++.               .....|+|....+..
T Consensus        29 ~~~i~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~L~~~~~~~  108 (184)
T 2za0_A           29 DFLLQQTMLRIKDPKKSLDFYTRVLGLTLLQKLDFPAMKFSLYFLAYEDKNDIPKDKSEKTAWTFSRKATLELTHNWGTE  108 (184)
T ss_dssp             TCEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEEGGGTEEEEEEESCCGGGSCSSHHHHHHHHTTSSSEEEEEEETTGG
T ss_pred             ceeEEEEEEEeCCHHHHHHHHHHhcCCEEEEeccCCCCCceeEEecccccccCCcccchheeeecCCCceEEEEecCCCC
Confidence            35699999999999999999999999998765433333455556554320               013567776543211


Q ss_pred             -----eec----cCceeeEEEEEecChHHHHHHHHHHHHhhCCeeeecccccCCCCceEEEEECCCCCeEEEEechhhhh
Q 022831          216 -----EYT----KGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNEDFLK  286 (291)
Q Consensus       216 -----~~~----~~~g~~hia~~v~di~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~~~~~  286 (291)
                           .+.    ...|++|++|.|+|++++++++    +++|+++..+|...++  .+++||+|||||.|||++.....+
T Consensus       109 ~~~~~~~~~~~~~~~g~~hi~f~v~dvd~~~~~l----~~~G~~~~~~p~~~~~--~~~~~~~DPdG~~iel~~~~~~~~  182 (184)
T 2za0_A          109 DDETQSYHNGNSDPRGFGHIGIAVPDVYSACKRF----EELGVKFVKKPDDGKM--KGLAFIQDPDGYWIEILNPNKIAT  182 (184)
T ss_dssp             GCTTCCCCCSSSSSCCEEEEEEECSCHHHHHHHH----HHTTCCEEECTTSSSS--TTCEEEECTTCCEEEEECTTTGGG
T ss_pred             CCcccccccCCCCCCCeeEEEEEeCCHHHHHHHH----HHCCCeeecCCcCCCc--eeEEEEECCCCCEEEEEecCcccc
Confidence                 011    1257899999999999999999    9999999988775443  467999999999999999876543

>2i7r_A Conserved domain protein; structural genomics conserved domain, PSI-2, protein structure initiative; 2.20A {Streptococcus pneumoniae} SCOP: d.32.1.2

Probab=99.75  E-value=1.9e-17  Score=120.83  Aligned_cols=115  Identities=17%  Similarity=0.142  Sum_probs=84.1

Q ss_pred             ccceeeEEEEeCCHHHHHHHHHHhcCCEEEEEeccCCCceeeEEeeccCCCcceEEEeeecCCCCcccCCCCceEEEEEE
Q 022831           21 KRRLLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHLAIAT  100 (291)
Q Consensus        21 ~~~i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~g~~~~~i~~~v  100 (291)
                      +++|.|+.|.|+|++++++||+++|||++.....    .  .+++..+.  ..+  .+......+....+.+ .|++|.|
T Consensus         3 ~m~i~~v~l~v~D~~~a~~FY~~~lG~~~~~~~~----~--~~~~~~~~--~~l--~l~~~~~~~~~~~~~~-~~~~~~v   71 (118)
T 2i7r_A            3 AMNLNQLDIIVSNVPQVCADLEHILDKKADYAND----G--FAQFTIGS--HCL--MLSQNHLVPLENFQSG-IIIHIEV   71 (118)
T ss_dssp             -CEEEEEEEECSCHHHHHHHHHHHHTSCCSEEET----T--EEEEEETT--EEE--EEESSCSSSCCCCCSC-EEEEEEC
T ss_pred             cceeeEEEEEeCCHHHHHHHHHHHhCCeeEEeCC----C--EEEEEeCC--eEE--EEEcCCCCCcccCCCe-EEEEEEE
Confidence            4689999999999999999999999999875321    1  34455432  222  2322111111122334 4799999


Q ss_pred             CCHHHHHHHHHHcCCeeeeCCccCCCCceEEEEEECCCCcEEEEEec
Q 022831          101 EDVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFELIQR  147 (291)
Q Consensus       101 ~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dP~G~~iel~~~  147 (291)
                      +|+++++++|+++|+++..+|...++|.+ .++++||+|+.|+|++.
T Consensus        72 ~d~~~~~~~l~~~G~~~~~~~~~~~~g~~-~~~~~DPdG~~iel~~~  117 (118)
T 2i7r_A           72 EDVDQNYKRLNELGIKVLHGPTVTDWGTE-SLLVQGPAGLVLDFYRM  117 (118)
T ss_dssp             SCHHHHHHHHHHHTCCEEEEEEECTTSCE-EEEEECGGGCEEEEEEC
T ss_pred             CCHHHHHHHHHHCCCceecCCccccCccE-EEEEECCCccEEEEEec
Confidence            99999999999999998877777777655 47899999999999874

>2rk0_A Glyoxalase/bleomycin resistance protein/dioxygena; 11002Z, glyoxylase, dioxygenas PSI-II; 2.04A {Frankia SP}

Probab=99.75  E-value=2e-17  Score=123.83  Aligned_cols=119  Identities=20%  Similarity=0.190  Sum_probs=90.1

Q ss_pred             CceeeeeeeCCchhhHHHHHHhcCCeeeeeccCcccceeeeeeccCCCCcceEEEEeEecCc--eee-ccCceeeEEEEE
Q 022831          153 PLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGV--TEY-TKGNAYAQVAIS  229 (291)
Q Consensus       153 ~~~hv~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~--~~~-~~~~g~~hia~~  229 (291)
                      +|.|+.|.|+|++++++||+++|||++......+++.+...++. +    ...|+|....+.  ... ..++|..|++|.
T Consensus         5 ~i~hv~l~v~Dl~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~-~----~~~l~l~~~~~~~~~~~~~~~~g~~h~~f~   79 (136)
T 2rk0_A            5 GVSHVSLTVRDLDISCRWYTEILDWKELVRGRGDTTSFAHGVLP-G----GLSIVLREHDGGGTDLFDETRPGLDHLSFS   79 (136)
T ss_dssp             EEEEEEEECSCHHHHHHHHHHHHCCEEEEEEECSSEEEEEEECT-T----SCEEEEEEETTCSSSCCCTTSSEEEEEEEE
T ss_pred             cccEEEEEeCCHHHHHHHHHHhcCCEEEeeccCCCCceEEEEEc-C----CCEEEEEeCCCCcccCCCCCCCCcceEEEE
Confidence            57899999999999999999999999877654333345555555 2    356777654322  111 234688999999


Q ss_pred             e---cChHHHHHHHHHHHHhhCCeeeecccccCCCCceEEEEECCCCCeEEEEechh
Q 022831          230 T---DDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNED  283 (291)
Q Consensus       230 v---~di~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~~  283 (291)
                      |   +|++++++++    +++|+++. +|...+.  ++.+||+|||||.|||++..+
T Consensus        80 v~~~~d~~~~~~~l----~~~G~~~~-~~~~~~~--g~~~~~~DPdG~~iel~~~~~  129 (136)
T 2rk0_A           80 VESMTDLDVLEERL----AKAGAAFT-PTQELPF--GWILAFRDADNIALEAMLGRE  129 (136)
T ss_dssp             ESSHHHHHHHHHHH----HHHTCCBC-CCEEETT--EEEEEEECTTCCEEEEEEECT
T ss_pred             eCCHHHHHHHHHHH----HHCCCccc-CccccCC--ceEEEEECCCCCEEEEEEcCC
Confidence            9   8999999999    99999976 4444443  388999999999999999654

>2p25_A Glyoxalase family protein; structural genomics, MCSG, PSI-2, protein struct initiative, midwest center for structural genomics, oxidore; 1.70A {Enterococcus faecalis}

Probab=99.75  E-value=1.6e-17  Score=122.27  Aligned_cols=119  Identities=21%  Similarity=0.282  Sum_probs=86.3

Q ss_pred             CCceeeeeeeCCchhhHHHHHHhcCCeeeeeccCcc-cceeeeeeccCCCCcceEEEEeEecCce---eeccCceeeEEE
Q 022831          152 EPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPE-LKCALAMLGYAEEDQTTVLELAYSYGVT---EYTKGNAYAQVA  227 (291)
Q Consensus       152 ~~~~hv~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~l~~~~~~~---~~~~~~g~~hia  227 (291)
                      .++.|+.|.|+|++++.+||+++|||++......++ +.+. .++..++    ..++|.......   ..+.++|..|++
T Consensus         4 ~~i~hi~l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~-~~~~~~~----~~l~l~~~~~~~~~~~~~~~~g~~~~~   78 (126)
T 2p25_A            4 KEIHHVAINASNYQATKNFYVEKLGFEVLRENHRPEKNDIK-LDLKLGS----QELEIFISDQFPARPSYPEALGLRHLA   78 (126)
T ss_dssp             SCCCCEEEEESCHHHHHHHHTTTTCCEEEEEEEEGGGTEEE-EEEEETT----EEEEEEECTTCCCCCCSSCCSSCCCEE
T ss_pred             cccceEEEEeCCHHHHHHHHHHhcCCEEEeeccCCCCcceE-EEEecCC----eEEEEEeccCCCCCCCCCCCccceEEE
Confidence            468999999999999999999999999876432222 2222 2233222    256665532211   112345888999


Q ss_pred             EEecChHHHHHHHHHHHHhhCCeeeecccccCCCCceEEEEECCCCCeEEEEe
Q 022831          228 ISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVD  280 (291)
Q Consensus       228 ~~v~di~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iel~~  280 (291)
                      |.|+|++++++++    +++|+++...|...+. +.+.+|++|||||.|||+|
T Consensus        79 ~~v~d~~~~~~~l----~~~G~~~~~~~~~~~~-g~~~~~~~DPdG~~iel~e  126 (126)
T 2p25_A           79 FKVEHIEEVIAFL----NEQGIETEPLRVDDFT-GKKMTFFFDPDGLPLELHE  126 (126)
T ss_dssp             EECSCHHHHHHHH----HHTTCCCCCCEECTTT-CCEEEEEECTTCCEEEEEC
T ss_pred             EEeCCHHHHHHHH----HHcCCccccccccCCC-CcEEEEEECCCCCEEEeeC
Confidence            9999999999999    9999998766554333 4688999999999999986

>1r9c_A Glutathione transferase; fosfomycin resistance protein, Mn binding, antibiotic resist transferase; 1.83A {Mesorhizobium loti} SCOP: d.32.1.2

Probab=99.75  E-value=2.5e-17  Score=123.77  Aligned_cols=118  Identities=20%  Similarity=0.305  Sum_probs=84.8

Q ss_pred             CccceeeEEEEeCCHHHHHHHHHHhcCCEEEEEeccCCCceee---EEeeccCCCcceEEEeeecCCCCcccCCCCceEE
Q 022831           20 DKRRLLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSN---AFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHL   96 (291)
Q Consensus        20 ~~~~i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~l~l~~~~~~~~~~~g~~~~~i   96 (291)
                      |+++|+|+.|.|+|++++.+||+++|||++......  ..+..   .++..+  +  ..+.+......+    ..+..|+
T Consensus         1 Mi~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~--~~~~~~~~~~~~~g--~--~~l~l~~~~~~~----~~~~~h~   70 (139)
T 1r9c_A            1 MIEGLSHMTFIVRDLERMTRILEGVFDAREVYASDT--EQFSLSREKFFLIG--D--IWVAIMQGEKLA----ERSYNHI   70 (139)
T ss_dssp             CEEEEEEEEEEESCHHHHHHHHHHHHCCEEEEEGGG--STTCCSCEEEEEET--T--EEEEEEECCCCS----SCCSCEE
T ss_pred             CCceEEEEEEEeCCHHHHHHHHHHhhCCEEeecCCC--ccccccceEEEEEC--C--EEEEEEeCCCCC----CCCeeEE
Confidence            578999999999999999999999999999765321  11110   144433  2  245555432111    3478899


Q ss_pred             EEEEC--CHHHHHHHHHHcCCeeeeCCccCCCCceEEEEEECCCCcEEEEEecC
Q 022831           97 AIATE--DVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFELIQRG  148 (291)
Q Consensus        97 ~~~v~--d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dP~G~~iel~~~~  148 (291)
                      +|.|+  |+++++++|.++|+++..++...+++.+ .+|++||+||.|||++..
T Consensus        71 ~~~v~~~d~~~~~~~l~~~G~~~~~~~~~~~~~~~-~~~~~DPdG~~iel~~~~  123 (139)
T 1r9c_A           71 AFKIDDADFDRYAERVGKLGLDMRPPRPRVEGEGR-SIYFYDDDNHMFELHTGT  123 (139)
T ss_dssp             EEECCGGGHHHHHHHHHHHTCCBCCCCC-----CC-EEEEECTTSCEEEEECCC
T ss_pred             EEEcCHHHHHHHHHHHHHCCCcccCCcccCCCCeE-EEEEECCCCCEEEEEeCC
Confidence            99999  9999999999999998776555544444 488999999999999754

>2qqz_A Glyoxalase family protein, putative; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; HET: MSE; 1.92A {Bacillus anthracis str}

Probab=99.74  E-value=4.4e-17  Score=120.23  Aligned_cols=118  Identities=16%  Similarity=0.200  Sum_probs=87.1

Q ss_pred             CCccceeeEEEEe--CCHHHHHHHHHHhcCCEEEEEeccCCCceeeEEeeccCCCcceEEEeeecCCCCcccCCCCceEE
Q 022831           19 KDKRRLLHAVYRV--GDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHL   96 (291)
Q Consensus        19 ~~~~~i~hv~l~v--~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~g~~~~~i   96 (291)
                      ||+.+|+|+.|.|  +|++++.+||+++|||++........ .....++..+.    ..+.+......    ...+..|+
T Consensus         6 m~~~~i~hv~l~v~~~D~~~a~~FY~~~lG~~~~~~~~~~~-~~~~~~~~~~~----~~l~l~~~~~~----~~~~~~~~   76 (126)
T 2qqz_A            6 NYIQGIDHVQVAAPVGCEEEARAFYGETIGMEEIPKPEELK-KRGGCWFKCGN----QEIHIGVEQNF----NPAKRAHP   76 (126)
T ss_dssp             CCEEEEEEEEEEECTTTHHHHHHHHTTTTCCEEECCCGGGG-GGCCEEEEETT----EEEEEEECTTC----CCCSSSCE
T ss_pred             cccceeeeEEEEcccccHHHHHHHHHhcCCCEEecCccccc-CCCceEEEeCC----EEEEEEecCCC----CCCCceEE
Confidence            6789999999999  89999999999999999976432110 01234555532    23445443211    12467899


Q ss_pred             EEEECCHHHHHHHHHHcCCeeeeCCccCCCCceEEEEEECCCCcEEEEEecC
Q 022831           97 AIATEDVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFELIQRG  148 (291)
Q Consensus        97 ~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dP~G~~iel~~~~  148 (291)
                      +|.|+|+++++++|+++|+++..++.  .+|. ..++++||+|+.|||++..
T Consensus        77 ~f~v~d~~~~~~~l~~~G~~~~~~~~--~~g~-~~~~~~DPdG~~iel~~~~  125 (126)
T 2qqz_A           77 AFYVLKIDEFKQELIKQGIEVIDDHA--RPDV-IRFYVSDPFGNRIEFMENK  125 (126)
T ss_dssp             EEEETTHHHHHHHHHHTTCCCEEECS--STTE-EEEEEECTTSCEEEEEEEC
T ss_pred             EEEcCCHHHHHHHHHHcCCCccCCCC--CCCe-eEEEEECCCCCEEEEEeCC
Confidence            99999999999999999999887663  2343 4588999999999999854

>3gm5_A Lactoylglutathione lyase and related lyases; sheet-helix-sheet-sheet-sheet motif, isomerase; HET: CIT; 2.00A {Thermoanaerobacter tengcongensis}

Probab=99.74  E-value=1e-17  Score=128.89  Aligned_cols=120  Identities=16%  Similarity=0.194  Sum_probs=91.3

Q ss_pred             CCCceeeeeeeCCchhhHHHHHHhcCCeeeeeccCc--------------ccceeeeeeccCCCCcceEEEEeEecCcee
Q 022831          151 PEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSP--------------ELKCALAMLGYAEEDQTTVLELAYSYGVTE  216 (291)
Q Consensus       151 ~~~~~hv~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~  216 (291)
                      ..+|+|+.|.|+|++++++||+++|||++..+...+              +....+.++..+    ...|+|........
T Consensus        17 ~~~i~Hv~i~V~Dle~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~g----~~~leL~~~~~~~~   92 (159)
T 3gm5_A           17 MRNTVQIGIVVRDIEESLQNYAEFFGVEKPQWFWTDDYSKAHTKFNGRPTKARAKLAFFELG----PLQLELIEPDENPS   92 (159)
T ss_dssp             GGGCEEEEEECSCHHHHHHHHHHHTTCCCCCCEECCCHHHHCCEETTEECCCCEEEEEEEET----TEEEEEEEECSSSC
T ss_pred             cccccEEEEEeCCHHHHHHHHHHhhCCCCceEEecCCcccccceeecccccceEEEEEEecC----CEEEEEEEECCCCC
Confidence            356999999999999999999999999976543222              123445555543    36677766533221


Q ss_pred             -e-----ccCceeeEEEEEecChHHHHHHHHHHHHhhCCeeeecccccCCCCceEEEEECCC--CCeEEEEec
Q 022831          217 -Y-----TKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPD--GWKTVLVDN  281 (291)
Q Consensus       217 -~-----~~~~g~~hia~~v~di~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DPd--G~~iel~~~  281 (291)
                       .     ..+.|++|++|.|+|+++++++|    +++|+++...+. ..  +.+++|++|||  |++|||+|+
T Consensus        93 ~~~~~l~~~~~g~~Hiaf~v~di~~~~~~l----~~~G~~~~~~~~-~~--g~~~~~~~dpd~~G~~iEl~e~  158 (159)
T 3gm5_A           93 TWREFLDKNGEGIHHIAFVVKDMDRKVEEL----YRKGMKVIQKGD-FE--GGRYAYIDTLRALKVMIELLEN  158 (159)
T ss_dssp             HHHHHHHHHCSEEEEEEEECSCHHHHHHHH----HHTTCCEEEEEE-ET--TEEEEEESCHHHHSSEEEEEEE
T ss_pred             hhHHHhhcCCceEEEEEEEcCCHHHHHHHH----HHCCCcEeeccc-cC--CeeEEEEeccccCcEEEEEEec
Confidence             1     13568999999999999999999    999999877653 33  47899999999  999999986

>2p7o_A Glyoxalase family protein; fosfomycin resistance protein, Mn binding, antibiotic resist metal binding protein, hydrolase; 1.44A {Listeria monocytogenes} PDB: 2p7k_A 2p7l_A 2p7m_A 2p7p_A 2p7q_A

Probab=99.74  E-value=4.7e-17  Score=121.18  Aligned_cols=119  Identities=20%  Similarity=0.283  Sum_probs=86.6

Q ss_pred             CccceeeEEEEeCCHHHHHHHHHHhcCCEEEEEeccCCCcee---eEEeeccCCCcceEEEeeecCCCCcccCCCCceEE
Q 022831           20 DKRRLLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYS---NAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHL   96 (291)
Q Consensus        20 ~~~~i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~l~l~~~~~~~~~~~g~~~~~i   96 (291)
                      |+++|+|+.|.|+|++++.+||+++|||++.....  ...+.   ..++..+  +  ..+.+......    .+.+..|+
T Consensus         1 Mi~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~--~~~~~~~~~~~~~~~--~--~~l~l~~~~~~----~~~~~~h~   70 (133)
T 2p7o_A            1 MISGLSHITLIVKDLNKTTAFLQNIFNAEEIYSSG--DKTFSLSKEKFFLIA--G--LWICIMEGDSL----QERTYNHI   70 (133)
T ss_dssp             CCCEEEEEEEEESCHHHHHHHHHHHHCCEECC-------CCCSSCEEEEEET--T--EEEEEEECSSC----CCCCSCEE
T ss_pred             CCceEEEEEEEcCCHHHHHHHHHHhcCCEEeeecC--CcccccCCceEEEeC--C--EEEEEecCCCC----CCCCeeEE
Confidence            68899999999999999999999999999875432  11111   0144433  2  34555543221    14478899


Q ss_pred             EEEEC--CHHHHHHHHHHcCCeeeeCCccCCCCceEEEEEECCCCcEEEEEecCC
Q 022831           97 AIATE--DVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFELIQRGP  149 (291)
Q Consensus        97 ~~~v~--d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dP~G~~iel~~~~~  149 (291)
                      +|.|+  |+++++++|+++|+++..++...+++.+ .++++||+|+.|||++...
T Consensus        71 ~~~v~~~d~~~~~~~l~~~G~~~~~~~~~~~~~~~-~~~~~DPdG~~iel~~~~~  124 (133)
T 2p7o_A           71 AFQIQSEEVDEYTERIKALGVEMKPERPRVQGEGR-SIYFYDFDNHLFELHAGTL  124 (133)
T ss_dssp             EEECCGGGHHHHHHHHHHHTCCEECCCCCCTTCCC-EEEEECSSSCEEEEECSSC
T ss_pred             EEEcCHHHHHHHHHHHHHCCCcccCCCccCCCCee-EEEEECCCCCEEEEEcCCh
Confidence            99994  9999999999999998877665544444 4889999999999998653

>1twu_A Hypothetical protein YYCE; structural genomics, protein structure initiative, MCSG, DUP of the alpha-beta sandwichs. bacillus subtilis, PSI; 2.00A {Bacillus subtilis} SCOP: d.32.1.8

Probab=99.74  E-value=6e-17  Score=121.72  Aligned_cols=127  Identities=14%  Similarity=0.260  Sum_probs=89.9

Q ss_pred             CCcCCccceeeEEEEeCCHHHHHHHHHHhcCCEEEEEeccCCCceeeEEeeccCCCcceEEEeeecCCCCcccCCCCceE
Q 022831           16 WPKKDKRRLLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGH   95 (291)
Q Consensus        16 ~~~~~~~~i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~g~~~~~   95 (291)
                      |++ |...+.||.|.|+|++++++||+++|||++..+... .+.+..++++.+.  ..+.+++...........+.+..|
T Consensus         5 ~~~-m~~~~~~i~l~v~Dl~~s~~FY~~~LG~~~~~~~~~-~~~~~~~~~~~~~--~~~~l~l~~~~~~~~~~~~~~~~h   80 (139)
T 1twu_A            5 FSS-FQAAQIRIARPTGQLDEIIRFYEEGLCLKRIGEFSQ-HNGYDGVMFGLPH--ADYHLEFTQYEGGSTAPVPHPDSL   80 (139)
T ss_dssp             CSS-CBCSCEEEEEECSCHHHHHHHHTTTSCCCEEEEEEE-ETTEEEEEEESSS--SSEEEEEEEETTCCCCCCCCTTCE
T ss_pred             CCC-CCcceeEEeeEeCCHHHHHHHHHhcCCcEEEEeccC-CCCeeEEEEecCC--CceEEEEeecCCCCCCCCCCCccE
Confidence            565 456678899999999999999999999999765432 2344566666542  234466655333223334557789


Q ss_pred             EEEEECCH---HHHHHHHHHcCCeeeeCCccCCCCceEEEEEECCCCcEEEEEecC
Q 022831           96 LAIATEDV---YKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFELIQRG  148 (291)
Q Consensus        96 i~~~v~d~---~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dP~G~~iel~~~~  148 (291)
                      ++|.|+|+   ++++++|+++|+++.....+.....+  .||+||||+.|||++..
T Consensus        81 i~~~v~d~~~l~~~~~~l~~~G~~~~~~~~~~~~~~g--~~~~DPdG~~iel~~~~  134 (139)
T 1twu_A           81 LVFYVPNAVELAAITSKLKHMGYQEVESENPYWSNGG--VTIEDPDGWRIVFMNSK  134 (139)
T ss_dssp             EEEECCCHHHHHHHHHHHHHTTCCEECCSSHHHHSSE--EEEECTTCCEEEEESSC
T ss_pred             EEEEeCCcchHHHHHHHHHHcCCcCcCCCCcccCCCC--eEEECCCCCEEEEEEcC
Confidence            99999999   99999999999998732211111112  26999999999999864

>3sk2_A EHPR; antibiotic resistance, griseoluteate-binding protein; HET: GRI; 1.01A {Pantoea agglomerans} PDB: 3sk1_A*

Probab=99.73  E-value=7e-17  Score=120.26  Aligned_cols=116  Identities=15%  Similarity=0.072  Sum_probs=87.4

Q ss_pred             CccceeeEEEEeCCHHHHHHHHHHhcCCEEEEEeccCCCceeeEEeeccCCCcceEEEeeecCCCCcccCCCCceEEEEE
Q 022831           20 DKRRLLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHLAIA   99 (291)
Q Consensus        20 ~~~~i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~g~~~~~i~~~   99 (291)
                      ++++++|+.|.|+|++++++||+++|||++.....    .  .+.+..++   ...+.+........ ....+..|++|.
T Consensus        10 ~~~~i~~v~l~v~D~~~s~~FY~~~lG~~~~~~~~----~--~~~~~~~~---~~~l~l~~~~~~~~-~~~~~~~~~~~~   79 (132)
T 3sk2_A           10 PTITPNLQLVYVSNVERSTDFYRFIFKKEPVFVTP----R--YVAFPSSG---DALFAIWSGGEEPV-AEIPRFSEIGIM   79 (132)
T ss_dssp             CCCCCCEEEEECSCHHHHHHHHHHHHTCCCSEECS----S--EEEEECST---TCEEEEESSSCCCC-TTSCCCEEEEEE
T ss_pred             CcceeeEEEEEECCHHHHHHHHHHHcCCeEEEcCC----C--EEEEEcCC---CcEEEEEeCCCCCc-CCCCCcceEEEE
Confidence            46799999999999999999999999999865432    1  33343221   23455544331111 233467899999


Q ss_pred             ECC---HHHHHHHHHH---cCCeeeeCCccCCCCceEEEEEECCCCcEEEEEec
Q 022831          100 TED---VYKMVENIRA---KGGNVTREPGPLKGMTTHFAFVKDPDGYIFELIQR  147 (291)
Q Consensus       100 v~d---~~~~~~~l~~---~G~~~~~~~~~~~~g~~~~~~~~dP~G~~iel~~~  147 (291)
                      |+|   +++++++|++   +|+++..+|...++|  ..++++|||||.|||.+.
T Consensus        80 v~~~~dv~~~~~~l~~~~~~G~~~~~~p~~~~~g--~~~~~~DPdGn~iel~~~  131 (132)
T 3sk2_A           80 LPTGEDVDKLFNEWTKQKSHQIIVIKEPYTDVFG--RTFLISDPDGHIIRVCPL  131 (132)
T ss_dssp             ESSHHHHHHHHHHHHHCSSSCCEEEEEEEEETTE--EEEEEECTTCCEEEEEEC
T ss_pred             eCCHHHHHHHHHHHHhhhcCCCEEeeCCcccCce--EEEEEECCCCCEEEEEeC
Confidence            986   9999999999   999998888777776  458999999999999874

>1jc4_A Methylmalonyl-COA epimerase; vicinal oxygen chelate superfamily, isomerase; 2.00A {Propionibacterium freudenreichiisubsp} SCOP: d.32.1.4 PDB: 1jc5_A

Probab=99.73  E-value=2.8e-17  Score=124.54  Aligned_cols=126  Identities=17%  Similarity=0.222  Sum_probs=90.9

Q ss_pred             CCceeeeeeeCCchhhHHHHHHhcCCeeeeeccCcccceeeeeeccCCC--CcceEEEEeEecCce-e-----eccC--c
Q 022831          152 EPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEE--DQTTVLELAYSYGVT-E-----YTKG--N  221 (291)
Q Consensus       152 ~~~~hv~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~l~l~~~~~~~-~-----~~~~--~  221 (291)
                      .++.|+.|.|+|++++.+||+++|||++......++......++..++.  ..+..|+|....... +     ...+  .
T Consensus         8 ~~~~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~   87 (148)
T 1jc4_A            8 ICIDHVAYACPDADEASKYYQETFGWHELHREENPEQGVVEIMMAPAAKLTEHMTQVQVMAPLNDESTVAKWLAKHNGRA   87 (148)
T ss_dssp             SEEEEEEEECSCHHHHHHHHHHHHCCEEEEEEEETTTTEEEEEEESSSSCCTTCCEEEEEEESSTTSHHHHHHHHTTTCC
T ss_pred             ceeeEEEEEeCCHHHHHHHHHHccCceeeecccCCCCCeEEEEEEcCCCCcCcceEEEEeecCCCCChHHHHHHhCCCCC
Confidence            5689999999999999999999999998765432322344555554431  122567776543221 1     1123  6


Q ss_pred             eeeEEEEEecChHHHHHHHHHHHHhhCCeee-ecccccCCCCceEEEE--ECCCCCeEEEEech
Q 022831          222 AYAQVAISTDDVYKSAEVVNLVTQELGGKIT-RQPGPIPGLNTKITSF--VDPDGWKTVLVDNE  282 (291)
Q Consensus       222 g~~hia~~v~di~~~~~~l~~~~~~~G~~~~-~~p~~~~~~~~~~~~~--~DPdG~~iel~~~~  282 (291)
                      |++|++|.|+|++++++++    +++|+++. .+|...++ +.+++|+  +|||||.|||++.+
T Consensus        88 g~~h~~~~v~d~~~~~~~l----~~~G~~~~~~~p~~~~~-g~~~~~~~~~DPdG~~iel~~~~  146 (148)
T 1jc4_A           88 GLHHMAWRVDDIDAVSATL----RERGVQLLYDEPKLGTG-GNRINFMHPKSGKGVLIELTQYP  146 (148)
T ss_dssp             EEEEEEEECSCHHHHHHHH----HHHTCCBSCSSCEECSS-SCEEEEBCGGGGTTSCEEEEECC
T ss_pred             ceEEEEEECCCHHHHHHHH----HHCCCeecCcCcccCCC-ceEEEEEeecCCCcEEEEEEecC
Confidence            8899999999999999999    99999987 34543232 4566777  99999999999864

>3rhe_A NAD-dependent benzaldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, SGX; 2.05A {Legionella pneumophila}

Probab=99.73  E-value=3.4e-17  Score=124.51  Aligned_cols=120  Identities=11%  Similarity=0.056  Sum_probs=85.0

Q ss_pred             CccceeeEEEEeCCHHHHHHHHHHhcCCEEEEEeccCCCceeeEEeeccCCCcceEEEeeecCCCCc-ccCCCCceEEEE
Q 022831           20 DKRRLLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTS-YDIGTGFGHLAI   98 (291)
Q Consensus        20 ~~~~i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~-~~~g~~~~~i~~   98 (291)
                      |+++|.|+.|.|+|++++++||+++|||++.....      ..+++..++ +  ..+.+........ ...+.+..+++|
T Consensus         3 m~~~i~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~------~~~~~~~~~-g--~~l~l~~~~~~~~~~~~~~~~~~l~f   73 (148)
T 3rhe_A            3 MLSDPNLVLFYVKNPAKSEEFYKNLLDTQPIESSP------TFAMFVMKT-G--LRLGLWAQEEIEPKAHQTGGGMELSF   73 (148)
T ss_dssp             ----CEEEEEEESCHHHHHHHHHHHHTCCCSEECS------SEEEEECTT-S--CEEEEEEGGGCSSCCC----CEEEEE
T ss_pred             ccccccEEEEEeCCHHHHHHHHHHHcCCEEeccCC------CEEEEEcCC-C--cEEEEecCCcCCccccCCCCeEEEEE
Confidence            57899999999999999999999999999876431      144555422 2  3444443322111 122346679999


Q ss_pred             EECC---HHHHHHHHHHcCCeeeeCCccCCCCceEEEEEECCCCcEEEEEecCCC
Q 022831           99 ATED---VYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFELIQRGPT  150 (291)
Q Consensus        99 ~v~d---~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dP~G~~iel~~~~~~  150 (291)
                      .|+|   +++++++|+++|+++..+|...++|  ..++++||+|+.|||++..+.
T Consensus        74 ~v~d~~dvd~~~~~l~~~G~~i~~~p~~~~~G--~~~~~~DPdG~~iel~~~~~~  126 (148)
T 3rhe_A           74 QVNSNEMVDEIHRQWSDKEISIIQPPTQMDFG--YTFVGVDPDEHRLRIFCLKRT  126 (148)
T ss_dssp             ECSCHHHHHHHHHHHHHTTCCEEEEEEEETTE--EEEEEECTTCCEEEEEEEC--
T ss_pred             EcCCHHHHHHHHHHHHhCCCEEEeCCeecCCC--cEEEEECCCCCEEEEEEcChh
Confidence            9987   9999999999999998888777776  458899999999999987643

>2pjs_A AGR_C_3564P, uncharacterized protein ATU1953; glyoxalase/bleomycin resistance protein/dioxygenase superfamily, structural genomics; 1.85A {Agrobacterium tumefaciens str} SCOP: d.32.1.2

Probab=99.73  E-value=2.1e-17  Score=120.64  Aligned_cols=115  Identities=17%  Similarity=0.191  Sum_probs=86.3

Q ss_pred             CCccceeeEEEEeCCHHHHHHHHHHhcCCEEEEEeccCCCceeeEEeeccCCCcceEEEeeecCCCCcccCCCCceEEEE
Q 022831           19 KDKRRLLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHLAI   98 (291)
Q Consensus        19 ~~~~~i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~g~~~~~i~~   98 (291)
                      |.+.++ |+.|.|+|++++.+||+++|||++....    +  ...++..+. ...+.+.+.....     ...+..|++|
T Consensus         4 m~i~~i-~v~l~v~d~~~a~~FY~~~lG~~~~~~~----~--~~~~~~~~~-~~~~~l~l~~~~~-----~~~~~~~~~~   70 (119)
T 2pjs_A            4 MAVRRV-VANIATPEPARAQAFYGDILGMPVAMDH----G--WIVTHASPL-EAHAQVSFAREGG-----SGTDVPDLSI   70 (119)
T ss_dssp             -CEEEE-EEEEECSCGGGGHHHHTTTTCCCEEEEC----S--SEEEEEEEE-EEEEEEEEESSSB-----TTBCCCSEEE
T ss_pred             cceeEE-EEEEEcCCHHHHHHHHHHhcCCEEEecC----C--EEEEEecCC-CCcEEEEEEcCCC-----CCCceeEEEE
Confidence            667889 9999999999999999999999987631    1  133444321 1234455543221     1235679999


Q ss_pred             EECCHHHHHHHHHHcCCeeeeCCccCCCCceEEEEEECCCCcEEEEEec
Q 022831           99 ATEDVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFELIQR  147 (291)
Q Consensus        99 ~v~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dP~G~~iel~~~  147 (291)
                      .|+|+++++++|+++|+++..++...++|.+ .++++||+|+.|+|++.
T Consensus        71 ~v~d~~~~~~~l~~~G~~~~~~~~~~~~g~~-~~~~~DPdG~~iel~~~  118 (119)
T 2pjs_A           71 EVDNFDEVHARILKAGLPIEYGPVTEAWGVQ-RLFLRDPFGKLINILSH  118 (119)
T ss_dssp             EESCHHHHHHHHHHTTCCCSEEEEECTTSCE-EEEEECTTSCEEEEEEC
T ss_pred             EECCHHHHHHHHHHCCCccccCCccCCCccE-EEEEECCCCCEEEEEec
Confidence            9999999999999999998877777776644 58899999999999875

>1ss4_A Glyoxalase family protein; structural genomics, PSI, prote structure initiative, midwest center for structural genomic unknown function; HET: CIT GSH; 1.84A {Bacillus cereus} SCOP: d.32.1.6

Probab=99.73  E-value=6e-17  Score=123.42  Aligned_cols=124  Identities=15%  Similarity=0.201  Sum_probs=90.7

Q ss_pred             CCceeeeeeeCCchhhHHHHHHhcCCeeeeeccC-----------cccceeeeeeccCCCCcceEEEEeEe--cCce---
Q 022831          152 EPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDS-----------PELKCALAMLGYAEEDQTTVLELAYS--YGVT---  215 (291)
Q Consensus       152 ~~~~hv~l~v~D~~~~~~Fy~~~lG~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~l~l~~~--~~~~---  215 (291)
                      .++.|+.|.|+|++++.+||++ |||++......           ++......++..++.  ...|+|...  ....   
T Consensus        10 ~~i~hv~l~v~D~~~a~~FY~~-lG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g--~~~l~l~~~~~~~~~~~~   86 (153)
T 1ss4_A           10 LRMDNVSIVVESLDNAISFFEE-IGLNLEGRANVEGEWAGRVTGLGSQCVEIAMMVTPDG--HSRIELSRFLTPPTIADH   86 (153)
T ss_dssp             EEEEEEEEECSCHHHHHHHHHH-HTCEEEEEEEECSHHHHHHHSCCSCEEEEEEEECTTS--SCEEEEEEEEESCCCCBC
T ss_pred             cceeeEEEEeCCHHHHHHHHHH-CCCEEEeeccCCcchhheeeCCCCCcEEEEEEECCCC--CcEEEEEEecCCCCcccc
Confidence            4589999999999999999999 99998754321           112234455554321  245665542  1111   


Q ss_pred             --eeccCceeeEEEEEecChHHHHHHHHHHHHhhCCeeeecccccCCCCceEEEEECCCCCeEEEEechh
Q 022831          216 --EYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNED  283 (291)
Q Consensus       216 --~~~~~~g~~hia~~v~di~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~~  283 (291)
                        ....+.|++|++|.|+|++++++++    +++|+++..+|...++ +.+++||+|||||.|||+++..
T Consensus        87 ~~~~~~~~g~~hl~~~v~d~~~~~~~l----~~~G~~~~~~~~~~~~-g~~~~~~~DPdG~~iel~~~~~  151 (153)
T 1ss4_A           87 RTAPVNALGYLRVMFTVEDIDEMVSRL----TKHGAELVGEVVQYEN-SYRLCYIRGVEGILIGLAEELG  151 (153)
T ss_dssp             TTCCSSSBEEEEEEEEESCHHHHHHHH----HHTTCEESSCCEEETT-TEEEEEEECGGGCEEEEEEECC
T ss_pred             cCCCCCCCceEEEEEEeCCHHHHHHHH----HHCCCeecCCCcccCC-ceEEEEEECCCCCEEEEEeccC
Confidence              0123458889999999999999999    9999999888766553 5688999999999999998653

>3bqx_A Glyoxalase-related enzyme; VOC superfamily, PSI-2, STRU genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; 1.40A {Fulvimarina pelagi}

Probab=99.73  E-value=4.2e-17  Score=124.23  Aligned_cols=119  Identities=22%  Similarity=0.309  Sum_probs=89.0

Q ss_pred             CCccceeeEEEEeCCHHHHHHHHHHhcCCEEEEEeccCCCceeeEEeeccCCCcceEEEeeecCC-----CCcccCCCCc
Q 022831           19 KDKRRLLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYG-----VTSYDIGTGF   93 (291)
Q Consensus        19 ~~~~~i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~-----~~~~~~g~~~   93 (291)
                      ||+++|.|+.|.|+|++++++||+++|||++....    +  ...++..+  +  ..+.+.....     ..+...+.+.
T Consensus         1 MM~~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~----~--~~~~~~~~--~--~~l~l~~~~~~~~~~~~~~~~~~~~   70 (150)
T 3bqx_A            1 MSLQQVAVITLGIGDLEASARFYGEGFGWAPVFRN----P--EIIFYQMN--G--FVLATWLVQNLQEDVGVAVTSRPGS   70 (150)
T ss_dssp             --CCCCCEEEEEESCHHHHHHHHHHTSCCCCSEEC----S--SEEEEECS--S--SEEEEEEHHHHHHHHSSCCCSSCCS
T ss_pred             CCccceEEEEEEcCCHHHHHHHHHHhcCCEeecCC----C--CEEEEEcC--C--EEEEEEeccccccccCCCCCCCCCe
Confidence            67889999999999999999999999999987643    1  14555543  2  2355544211     0011124567


Q ss_pred             eEEEEEE---CCHHHHHHHHHHcCCeeeeCCccCCCCceEEEEEECCCCcEEEEEecC
Q 022831           94 GHLAIAT---EDVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFELIQRG  148 (291)
Q Consensus        94 ~~i~~~v---~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dP~G~~iel~~~~  148 (291)
                      .|++|.|   +|+++++++|+++|+++..++...++|.+ .++++||+|+.|+|++..
T Consensus        71 ~~l~f~v~~~~dv~~~~~~l~~~G~~~~~~~~~~~~g~~-~~~~~DPdG~~iel~~~~  127 (150)
T 3bqx_A           71 MALAHNVRAETEVAPLMERLVAAGGQLLRPADAPPHGGL-RGYVADPDGHIWEIAFNP  127 (150)
T ss_dssp             CEEEEECSSGGGHHHHHHHHHHTTCEEEEEEECCTTSSE-EEEEECTTCCEEEEEECT
T ss_pred             EEEEEEeCCHHHHHHHHHHHHHCCCEEecCCcccCCCCE-EEEEECCCCCEEEEEeCC
Confidence            8999999   89999999999999998887777766654 588999999999999875

>2kjz_A ATC0852; protein of unknown function, dimer, structural genomics, PSI protein structure initiative; NMR {Agrobacterium tumefaciens}

Probab=99.73  E-value=4.2e-17  Score=123.44  Aligned_cols=119  Identities=15%  Similarity=0.182  Sum_probs=88.2

Q ss_pred             CCccceeeEEEEeCCHHHHHHHHHHhcCCEEEEEeccCCCceeeEEeeccCCCcceEEEeeecCCCCcc-cCCCCceEEE
Q 022831           19 KDKRRLLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTSY-DIGTGFGHLA   97 (291)
Q Consensus        19 ~~~~~i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~-~~g~~~~~i~   97 (291)
                      ..+++|.|+.|.|+|++++.+||+++|||++....  +  .  ..++..++   ...+.+.......+. ..+.+..|++
T Consensus        21 ~~m~~l~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~--~--~--~~~~~~~~---~~~l~l~~~~~~~~~~~~~~~~~hl~   91 (144)
T 2kjz_A           21 GHMTHPDFTILYVDNPPASTQFYKALLGVDPVESS--P--T--FSLFVLAN---GMKLGLWSRHTVEPKASVTGGGGELA   91 (144)
T ss_dssp             --CCCCCEEEEEESCHHHHHHHHHHHHTCCCSEEE--T--T--EEEEECTT---SCEEEEEETTSCSSCCCCSSSSCEEE
T ss_pred             cccCceeEEEEEeCCHHHHHHHHHHccCCEeccCC--C--C--eEEEEcCC---CcEEEEEeCCCCCCccCCCCCceEEE
Confidence            34569999999999999999999999999987653  1  1  34455432   234555543322221 2235788999


Q ss_pred             EEEC---CHHHHHHHHHHcCCeeeeCCccCCCCceEEEEEECCCCcEEEEEecC
Q 022831           98 IATE---DVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFELIQRG  148 (291)
Q Consensus        98 ~~v~---d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dP~G~~iel~~~~  148 (291)
                      |.|+   |+++++++|+++|+++..++...++|  ..++++||+|+.|||++..
T Consensus        92 f~v~d~~dv~~~~~~l~~~G~~~~~~~~~~~~g--~~~~~~DPdG~~iel~~~~  143 (144)
T 2kjz_A           92 FRVENDAQVDETFAGWKASGVAMLQQPAKMEFG--YTFTAADPDSHRLRVYAFA  143 (144)
T ss_dssp             EECSSHHHHHHHHHHHHHTTCCCCSCCEEETTE--EEEEECCTTCCEEEEEEEC
T ss_pred             EEeCCHHHHHHHHHHHHHCCCeEecCceecCCc--eEEEEECCCCCEEEEEecC
Confidence            9997   58999999999999988777776665  4588999999999999754

>3g12_A Putative lactoylglutathione lyase; glyoxalase, bleomycin resistance, PSI-2, NYSGXRC, structural genomics; 2.58A {Bdellovibrio bacteriovorus HD100}

Probab=99.73  E-value=5.9e-17  Score=120.08  Aligned_cols=120  Identities=15%  Similarity=0.140  Sum_probs=82.1

Q ss_pred             CccceeeEEEEeCCHHHHHHHHHHhcCCEEEEEeccCCCceeeEEeeccCCCcceEEEeeecCCCCcccCCCCceEEEEE
Q 022831           20 DKRRLLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHLAIA   99 (291)
Q Consensus        20 ~~~~i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~g~~~~~i~~~   99 (291)
                      +...|+||.|.|+|++++++||++ |||++..... ..+.  ..++.... +  ..+.+.....  ......+..+++|.
T Consensus         3 ~~~~i~hv~l~v~D~~~a~~FY~~-LG~~~~~~~~-~~~~--~~~~~~~~-~--~~l~l~~~~~--~~~~~~~~~~l~f~   73 (128)
T 3g12_A            3 LSLLITSITINTSHLQGMLGFYRI-IGFQFTASKV-DKGS--EVHRAVHN-G--VEFSLYSIQN--PQRSQIPSLQLGFQ   73 (128)
T ss_dssp             -CEEEEEEEEEESCHHHHHHHHHH-HTCCCEEC------C--CEEEEEET-T--EEEEEEECCC--CSSCCCCSEEEEEE
T ss_pred             ccceEEEEEEEcCCHHHHHHHHHH-CCCEEecccC-CCCC--EEEEEeCC-C--eEEEEEECCC--CcCCCCCceEEEEE
Confidence            456899999999999999999999 9999875411 1112  33343111 2  2344432211  11222345689999


Q ss_pred             ECCHHHHHHHHHHcCCe-eeeCCccCCCCceEEEEEECCCCcEEEEEecCCC
Q 022831          100 TEDVYKMVENIRAKGGN-VTREPGPLKGMTTHFAFVKDPDGYIFELIQRGPT  150 (291)
Q Consensus       100 v~d~~~~~~~l~~~G~~-~~~~~~~~~~g~~~~~~~~dP~G~~iel~~~~~~  150 (291)
                      |+|+++++++|+++|++ +..+|...++|.+  ++|+|||||.|+|.+..+.
T Consensus        74 v~dvd~~~~~l~~~G~~~~~~~p~~~~~G~~--~~~~DPdGn~iel~~~~~~  123 (128)
T 3g12_A           74 ITDLEKTVQELVKIPGAMCILDPTDMPDGKK--AIVLDPDGHSIELCELEGH  123 (128)
T ss_dssp             ESCHHHHHHHHTTSTTCEEEEEEEECC-CEE--EEEECTTCCEEEEEC----
T ss_pred             eCCHHHHHHHHHHCCCceeccCceeCCCccE--EEEECCCCCEEEEEEeccc
Confidence            99999999999999999 8877777777654  8899999999999987643

>3r6a_A Uncharacterized protein; PSI biology, structural genomics, NEW YORK structural genomi research consortium, putative glyoxalase I; 1.76A {Methanosarcina mazei}

Probab=99.73  E-value=3e-17  Score=124.18  Aligned_cols=120  Identities=14%  Similarity=0.208  Sum_probs=86.5

Q ss_pred             CCccceeeEEEEeCCHHHHHHHHHHhcCCEEEEEeccCCCceeeEEeeccCCCcceEEEeeecCCCCcccCCCCceEEEE
Q 022831           19 KDKRRLLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHLAI   98 (291)
Q Consensus        19 ~~~~~i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~g~~~~~i~~   98 (291)
                      |.+.++. +.|.|+|++++++||+++|||++..+...+...+....++  .      +.+.....  ......+..|++|
T Consensus         3 M~i~~i~-i~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~~~--~------~~l~~~~~--~~~~~~~~~hl~f   71 (144)
T 3r6a_A            3 MKILQIL-SRLYVADLNPALEFYEELLETPVAMRFEIPQTGVELAQIS--T------ILLIAGSE--EALKPFRNTQATF   71 (144)
T ss_dssp             CCEEEEE-EEEEESCHHHHHHHHHHHTTCCCCEECCCSCSSCEEEEET--T------EEEEESCH--HHHGGGGGCCEEE
T ss_pred             EEEEEEE-EEEEECCHHHHHHHHHHhcCCEEEEEeccCCccEEEEEec--c------EEEecCCc--ccCCCCcceEEEE
Confidence            4467777 9999999999999999999999876544333333333221  1      22222211  1111124579999


Q ss_pred             EECCHHHHHHHHHHcCCeeeeCCccCCCCceEEEEEECCCCcEEEEEecCCCC
Q 022831           99 ATEDVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFELIQRGPTP  151 (291)
Q Consensus        99 ~v~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dP~G~~iel~~~~~~~  151 (291)
                      .|+|+++++++|+++|+++..++...++| + .++++||+|+.|||++..+.+
T Consensus        72 ~V~d~d~~~~~l~~~G~~v~~~p~~~~~G-~-~~~~~DPdG~~iel~~~~~~~  122 (144)
T 3r6a_A           72 LVDSLDKFKTFLEENGAEIIRGPSKVPTG-R-NMTVRHSDGSVIEYVEHSKIE  122 (144)
T ss_dssp             EESCHHHHHHHHHHTTCEEEEEEEEETTE-E-EEEEECTTSCEEEEEEECC--
T ss_pred             EeCCHHHHHHHHHHcCCEEecCCccCCCc-e-EEEEECCCCCEEEEEEcCCcc
Confidence            99999999999999999998887777776 3 479999999999999987543

>3ey7_A Biphenyl-2,3-DIOL 1,2-dioxygenase III-related protein; integron cassette protein mobIle metagenome structural genomics, oxidoreductase, PSI-2; HET: MSE; 1.60A {Vibrio cholerae} PDB: 3ey8_A*

Probab=99.73  E-value=3.1e-17  Score=121.90  Aligned_cols=119  Identities=23%  Similarity=0.248  Sum_probs=88.3

Q ss_pred             CCCceeeeeeeCCchhhHHHHHHhcCCeeeeeccCcccceeeeeeccCCCCcceEEEEeEecCce---eeccCceeeEEE
Q 022831          151 PEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVT---EYTKGNAYAQVA  227 (291)
Q Consensus       151 ~~~~~hv~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~---~~~~~~g~~hia  227 (291)
                      ..++.|+.|.|+|++++++||+++|||++.....  .  .  .++..+    ...+.+.......   .....++.+|++
T Consensus         8 ~~~i~hi~l~v~D~~~a~~FY~~~lG~~~~~~~~--~--~--~~~~~~----~~~~~l~~~~~~~~~~~~~~~~~~~~~~   77 (133)
T 3ey7_A            8 ISHLDHLVLTVADIPTTTNFYEKVLGMKAVSFGA--G--R--IALEFG----HQKINLHQLGNEFEPKAQNVRVGSADLC   77 (133)
T ss_dssp             CCEEEEEEEEESCHHHHHHHHHHHHCCEEEEETT--T--E--EEEEET----TEEEEEEETTSCCSSCCTTCCTTCCEEE
T ss_pred             ecccCEEEEEECCHHHHHHHHHHccCceEEEecC--C--e--EEEEcC----CEEEEEEcCCCCccccCCCCCCCccEEE
Confidence            3578999999999999999999999999876531  1  1  223322    2445554432111   112345889999


Q ss_pred             EEecC-hHHHHHHHHHHHHhhCCeeeecccccCCCC--ceEEEEECCCCCeEEEEechh
Q 022831          228 ISTDD-VYKSAEVVNLVTQELGGKITRQPGPIPGLN--TKITSFVDPDGWKTVLVDNED  283 (291)
Q Consensus       228 ~~v~d-i~~~~~~l~~~~~~~G~~~~~~p~~~~~~~--~~~~~~~DPdG~~iel~~~~~  283 (291)
                      |.|+| ++++++++    +++|+++..+|...++..  .+.+|++|||||.|||++..+
T Consensus        78 ~~v~dd~~~~~~~l----~~~G~~~~~~~~~~~~~~g~~~~~~~~DPdG~~iel~~~~~  132 (133)
T 3ey7_A           78 FITDTVLSDAMKHV----EDQGVTIMEGPVKRTGAQGAITSFYFRDPDGNLIEVSTYSN  132 (133)
T ss_dssp             EECSSCHHHHHHHH----HHTTCCCCEEEEEEEETTEEEEEEEEECTTCCEEEEEESCC
T ss_pred             EEeCcHHHHHHHHH----HHCCCccccCCccccCCCCCeEEEEEECCCCCEEEEEecCC
Confidence            99997 99999999    999999988876554322  378999999999999999764

>3kol_A Oxidoreductase, glyoxalase/bleomycin resistance protein/dioxygenase; metal ION binding, NYSGXRC, PSI2, structural genomics; 1.90A {Nostoc punctiforme pcc 73102}

Probab=99.72  E-value=4.9e-17  Score=124.27  Aligned_cols=124  Identities=21%  Similarity=0.233  Sum_probs=90.4

Q ss_pred             CCCceeeeeeeCCchhhHHHHHHhcCCeeeeeccCcc------cceeeeeeccCCCCcceEEEEeEecCcee-----ecc
Q 022831          151 PEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPE------LKCALAMLGYAEEDQTTVLELAYSYGVTE-----YTK  219 (291)
Q Consensus       151 ~~~~~hv~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~l~l~~~~~~~~-----~~~  219 (291)
                      ..+|.|+.|.|+|++++++||+++|||++......+.      ..-...++..++   ...++|.......+     ...
T Consensus        17 ~~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~l~l~~~~~~~~~~~~~~~~   93 (156)
T 3kol_A           17 LRKVHHIALNVQDMQASRYFYGTILGLHELTDDEVPATLTELVASGKVANFITPD---GTILDLFGEPELSPPDPNPEKT   93 (156)
T ss_dssp             SCCCCEEEEEESCHHHHHHHHTTTSCCEECCTTTSCTTTHHHHHTTSEEEEECTT---SCEEEEEECTTCCCSSSSTTCC
T ss_pred             cceEeEEEEEeCCHHHHHHHHHhhcCCEEEeecccCcchhcccCCCcEEEEEeCC---CCEEEEEecCCCCcCCCCCCCC
Confidence            3579999999999999999999999999876322111      001123333322   24566655433211     112


Q ss_pred             CceeeEEEEEec--ChHHHHHHHHHHHHhhCCeeeecccccCCCCceEEEEECCCCCeEEEEechh
Q 022831          220 GNAYAQVAISTD--DVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNED  283 (291)
Q Consensus       220 ~~g~~hia~~v~--di~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~~  283 (291)
                      ..+..|++|.|+  |++++++++    +++|+++..+|...++  ++.+||+|||||.|||+++..
T Consensus        94 ~~~~~h~~~~v~~~d~~~~~~~l----~~~G~~~~~~~~~~~~--g~~~~~~DPdG~~iel~~~~~  153 (156)
T 3kol_A           94 FTRAYHLAFDIDPQLFDRAVTVI----GENKIAIAHGPVTRPT--GRGVYFYDPDGFMIEIRCDPE  153 (156)
T ss_dssp             CSSCCEEEEECCGGGHHHHHHHH----HHTTCCEEEEEEEC-C--CEEEEEECTTSCEEEEEECCC
T ss_pred             CCceEEEEEEecHHHHHHHHHHH----HHCCCccccCceecCC--ccEEEEECCCCCEEEEEecCC
Confidence            458899999998  999999999    9999999888877654  468999999999999999764

>3zw5_A Glyoxalase domain-containing protein 5; lyase; 1.60A {Homo sapiens}

Probab=99.72  E-value=7.9e-17  Score=122.31  Aligned_cols=119  Identities=23%  Similarity=0.322  Sum_probs=85.2

Q ss_pred             cCCccceeeEEEEeCCHHHHHHHHHHhcCCEEEEEeccCCCceeeEEeeccCCCcceEEEeeecCC---CCcccCCCCce
Q 022831           18 KKDKRRLLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYG---VTSYDIGTGFG   94 (291)
Q Consensus        18 ~~~~~~i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~---~~~~~~g~~~~   94 (291)
                      .|++.+|+||.|.|+|++++++||+++|||++.....    .  ..++..+.  ..  +.+.....   ........|..
T Consensus        22 ~m~i~~i~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~----~--~~~l~~g~--~~--l~l~~~~~~~~~~~~~~~~g~~   91 (147)
T 3zw5_A           22 SMLIRRLDHIVMTVKSIKDTTMFYSKILGMEVMTFKE----D--RKALCFGD--QK--FNLHEVGKEFEPKAAHPVPGSL   91 (147)
T ss_dssp             HTSCEEEEEEEEEESCHHHHHHHHHHHHCCEEEEETT----T--EEEEEETT--EE--EEEEETTSCCSSCCSSCCTTCC
T ss_pred             ceecccccEEEEEeCCHHHHHHHHHHhcCCEEEecCC----C--ceEEEECC--cE--EEEEEcCCCcCcccCCCCCCCc
Confidence            3678999999999999999999999999999985421    1  33454432  22  33332211   11122344778


Q ss_pred             EEEEEEC-CHHHHHHHHHHcCCeeeeCCccCCC--CceEEEEEECCCCcEEEEEe
Q 022831           95 HLAIATE-DVYKMVENIRAKGGNVTREPGPLKG--MTTHFAFVKDPDGYIFELIQ  146 (291)
Q Consensus        95 ~i~~~v~-d~~~~~~~l~~~G~~~~~~~~~~~~--g~~~~~~~~dP~G~~iel~~  146 (291)
                      |++|.+. |+++++++|+++|+++...|....+  |....+||+||||+.|||.+
T Consensus        92 ~~~~~~~~dl~~~~~~l~~~G~~~~~~p~~~~~~~g~~~~~~~~DPdGn~iEl~~  146 (147)
T 3zw5_A           92 DICLITEVPLEEMIQHLKACDVPIEEGPVPRTGAKGPIMSIYFRDPDRNLIEVSN  146 (147)
T ss_dssp             EEEEECSSCHHHHHHHHHHTTCCCCEEEEEEEETTEEEEEEEEECTTCCEEEEEE
T ss_pred             eEEEEeccCHHHHHHHHHHcCCceeeCcccccCCCCceEEEEEECCCCCEEEEec
Confidence            8999886 9999999999999998765544332  22345889999999999986

>3g12_A Putative lactoylglutathione lyase; glyoxalase, bleomycin resistance, PSI-2, NYSGXRC, structural genomics; 2.58A {Bdellovibrio bacteriovorus HD100}

Probab=99.72  E-value=7.4e-17  Score=119.54  Aligned_cols=119  Identities=15%  Similarity=0.203  Sum_probs=81.8

Q ss_pred             CCceeeeeeeCCchhhHHHHHHhcCCeeeeeccCcccceeeeeeccCCCCcceEEEEeEecCceeeccCceeeEEEEEec
Q 022831          152 EPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAISTD  231 (291)
Q Consensus       152 ~~~~hv~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~~hia~~v~  231 (291)
                      ..|.|+.|.|+|++++++||++ |||++..... ..+.+..+... +    ...+.+....+  ......+.+|++|.|+
T Consensus         5 ~~i~hv~l~v~D~~~a~~FY~~-LG~~~~~~~~-~~~~~~~~~~~-~----~~~l~l~~~~~--~~~~~~~~~~l~f~v~   75 (128)
T 3g12_A            5 LLITSITINTSHLQGMLGFYRI-IGFQFTASKV-DKGSEVHRAVH-N----GVEFSLYSIQN--PQRSQIPSLQLGFQIT   75 (128)
T ss_dssp             EEEEEEEEEESCHHHHHHHHHH-HTCCCEEC------CCEEEEEE-T----TEEEEEEECCC--CSSCCCCSEEEEEEES
T ss_pred             ceEEEEEEEcCCHHHHHHHHHH-CCCEEecccC-CCCCEEEEEeC-C----CeEEEEEECCC--CcCCCCCceEEEEEeC
Confidence            3589999999999999999999 9999766421 11122222211 1    24455533221  1122345688999999


Q ss_pred             ChHHHHHHHHHHHHhhCCe-eeecccccCCCCceEEEEECCCCCeEEEEechhhh
Q 022831          232 DVYKSAEVVNLVTQELGGK-ITRQPGPIPGLNTKITSFVDPDGWKTVLVDNEDFL  285 (291)
Q Consensus       232 di~~~~~~l~~~~~~~G~~-~~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~~~~  285 (291)
                      |++++++++    +++|++ +..+|...++ +.+ ++|+|||||+|||.+.++..
T Consensus        76 dvd~~~~~l----~~~G~~~~~~~p~~~~~-G~~-~~~~DPdGn~iel~~~~~~~  124 (128)
T 3g12_A           76 DLEKTVQEL----VKIPGAMCILDPTDMPD-GKK-AIVLDPDGHSIELCELEGHH  124 (128)
T ss_dssp             CHHHHHHHH----TTSTTCEEEEEEEECC--CEE-EEEECTTCCEEEEEC-----
T ss_pred             CHHHHHHHH----HHCCCceeccCceeCCC-ccE-EEEECCCCCEEEEEEecccc
Confidence            999999999    999999 8888877665 445 99999999999999987653

>1nki_A Probable fosfomycin resistance protein; potassium binding loop, manganese binding, transferase; 0.95A {Pseudomonas aeruginosa} SCOP: d.32.1.2 PDB: 1lqo_A 1lqk_A 1lqp_A 1nnr_A

Probab=99.72  E-value=3.4e-16  Score=116.97  Aligned_cols=113  Identities=22%  Similarity=0.312  Sum_probs=85.3

Q ss_pred             CccceeeEEEEeCCHHHHHHHHHHhcCCEEEEEeccCCCceeeEEeeccCCCcceEEEeeecCCCCcccCCCCceEEEEE
Q 022831           20 DKRRLLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHLAIA   99 (291)
Q Consensus        20 ~~~~i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~g~~~~~i~~~   99 (291)
                      |+++|+|+.|.|+|++++.+||+++|||++.....  .    ..++..+.    ..+.+......  .....+..|++|.
T Consensus         1 Mi~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~--~----~~~~~~~~----~~l~l~~~~~~--~~~~~~~~h~~~~   68 (135)
T 1nki_A            1 MLTGLNHLTLAVADLPASIAFYRDLLGFRLEARWD--Q----GAYLELGS----LWLCLSREPQY--GGPAADYTHYAFG   68 (135)
T ss_dssp             CEEEEEEEEEEESCHHHHHHHHHHTTCCEEEEEET--T----EEEEEETT----EEEEEEECTTC--CCCCSSSCEEEEE
T ss_pred             CCceEeEEEEEeCCHHHHHHHHHHhcCCEEEEcCC--C----ceEEecCC----EEEEEEeCCCC--CCCCCCcceEEEE
Confidence            57899999999999999999999999999976532  1    34555432    23445443211  1223477899999


Q ss_pred             EC--CHHHHHHHHHHcCCeeeeCCccCCCCceEEEEEECCCCcEEEEEecC
Q 022831          100 TE--DVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFELIQRG  148 (291)
Q Consensus       100 v~--d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dP~G~~iel~~~~  148 (291)
                      |+  |+++++++|+++|+++..++..  ++ + .++++||+||.|||++..
T Consensus        69 v~~~d~~~~~~~l~~~G~~~~~~~~~--~~-~-~~~~~DPdG~~iel~~~~  115 (135)
T 1nki_A           69 IAAADFARFAAQLRAHGVREWKQNRS--EG-D-SFYFLDPDGHRLEAHVGD  115 (135)
T ss_dssp             ECHHHHHHHHHHHHHTTCCEEECCCS--SS-C-EEEEECTTCCEEEEESCC
T ss_pred             ccHHHHHHHHHHHHHCCCceecCCCC--Ce-E-EEEEECCCCCEEEEEECC
Confidence            97  9999999999999998876543  33 3 488999999999999764

>3itw_A Protein TIOX; bleomycin resistance fold, bisintercalator, solvent-exposed residue, thiocoraline, protein binding, peptide binding Pro; 2.15A {Micromonospora SP}

Probab=99.72  E-value=1.4e-16  Score=119.30  Aligned_cols=121  Identities=16%  Similarity=0.084  Sum_probs=87.6

Q ss_pred             ceeeeeeeCCchhhHHHHHHhcCCeeeeeccCcccceeeeeeccCCCCcceEEEEeEecCce--eeccCceeeEEEEEec
Q 022831          154 LCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVT--EYTKGNAYAQVAISTD  231 (291)
Q Consensus       154 ~~hv~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~--~~~~~~g~~hia~~v~  231 (291)
                      ..++.|.|+|++++.+||+++|||++......+ +......+..+    ...+.+.......  ....+.+.+|++|.|+
T Consensus         3 ~~~i~l~v~D~~~a~~FY~~~lG~~~~~~~~~~-g~~~~~~l~~~----~~~l~l~~~~~~~~~~~~~~~~~~~~~~~v~   77 (137)
T 3itw_A            3 HMVVELAYTDPDRAVDWLVRVFGFRLLLRQPAI-GTIRHADLDTG----GGIVMVRRTGEPYTVSCAGGHTCKQVIVWVS   77 (137)
T ss_dssp             CCEEEEEESCHHHHHHHHHHHHCCEEEEEESSS-SSCSEEEEECS----SSEEEEEETTCCSSCEECCCCCCCEEEEEES
T ss_pred             eEEEEEEECCHHHHHHHHHHccCCEEEEEecCC-CcEEEEEEecC----CeEEEEEecCCCcCccCCCCCcEEEEEEEeC
Confidence            467899999999999999999999988765433 32233334432    2345554322111  1111234349999999


Q ss_pred             ChHHHHHHHHHHHHhhCCeeeecccccCCCCceEEEEECCCCCeEEEEechhh
Q 022831          232 DVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNEDF  284 (291)
Q Consensus       232 di~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~~~  284 (291)
                      |++++++++    +++|+++..+|...+. +.+.++|+|||||.|||+++.+-
T Consensus        78 dv~~~~~~l----~~~G~~~~~~~~~~~~-g~~~~~~~DPdG~~iel~~~~~~  125 (137)
T 3itw_A           78 DVDEHFMRS----TAAGADIVQPLQDKPW-GLRQYLVRDLEGHLWEFTRHLRD  125 (137)
T ss_dssp             CHHHHHHHH----HHTTCEEEEEEEEETT-TEEEEEEECSSSCEEEEEECC--
T ss_pred             CHHHHHHHH----HHcCCeeccCccccCC-CcEEEEEECCCCCEEEEEEEcCC
Confidence            999999999    9999999998887775 46899999999999999997543

>1npb_A Fosfomycin-resistance protein; manganese binding, potassium binding loop, transferase; 2.50A {Serratia marcescens} SCOP: d.32.1.2

Probab=99.71  E-value=3.3e-16  Score=117.94  Aligned_cols=115  Identities=21%  Similarity=0.340  Sum_probs=85.9

Q ss_pred             CccceeeEEEEeCCHHHHHHHHHHhcCCEEEEEeccCCCceeeEEeeccCCCcceEEEeeecCCC-CcccCCCCceEEEE
Q 022831           20 DKRRLLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGV-TSYDIGTGFGHLAI   98 (291)
Q Consensus        20 ~~~~i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~-~~~~~g~~~~~i~~   98 (291)
                      |+++|+|+.|.|+|++++++||+++|||++.....  .    ..++..+  +  ..+.+...... .....+.+..|++|
T Consensus         1 Mi~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~--~----~~~~~~~--~--~~l~l~~~~~~~~~~~~~~~~~hi~~   70 (141)
T 1npb_A            1 MLQSLNHLTLAVSDLQKSVTFWHELLGLTLHARWN--T----GAYLTCG--D--LWVCLSYDEARQYVPPQESDYTHYAF   70 (141)
T ss_dssp             CCCEEEEEEEEESCHHHHHHHHHTTSCCEEEEEET--T----EEEEEET--T--EEEEEEECTTCCCCCGGGSCSCEEEE
T ss_pred             CCceEEEEEEEeCCHHHHHHHHHhccCCEEEeecC--C----cEEEEEC--C--EEEEEEECCCCCCCCCCCCCceEEEE
Confidence            68899999999999999999999999999976532  1    3455543  2  23444443211 11123347789999


Q ss_pred             EEC--CHHHHHHHHHHcCCeeeeCCccCCCCceEEEEEECCCCcEEEEEecC
Q 022831           99 ATE--DVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFELIQRG  148 (291)
Q Consensus        99 ~v~--d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dP~G~~iel~~~~  148 (291)
                      .|+  |+++++++|+++|+++..++..   +. ..++++||+|+.|||++..
T Consensus        71 ~v~~~d~~~~~~~l~~~G~~~~~~~~~---~~-~~~~~~DPdG~~iel~~~~  118 (141)
T 1npb_A           71 TVAEEDFEPLSQRLEQAGVTIWKQNKS---EG-ASFYFLDPDGHKLELHVGS  118 (141)
T ss_dssp             ECCHHHHHHHHHHHHHTTCCEEECCCS---SS-EEEEEECTTCCEEEEEECC
T ss_pred             EeCHHHHHHHHHHHHHCCCeEeccCCC---ce-eEEEEECCCCCEEEEEECc
Confidence            996  9999999999999998876532   22 3588999999999999865

>2r6u_A Uncharacterized protein; structural genomics, PSI-2, RHA04853, MCSG, protein structur initiative, midwest center for structural genomics; 1.50A {Rhodococcus SP}

Probab=99.71  E-value=3e-16  Score=119.26  Aligned_cols=117  Identities=19%  Similarity=0.266  Sum_probs=85.0

Q ss_pred             cCCccceeeEEEEeCCHHHHHHHHHHhcCCEEEEEeccCCCceeeEEeeccCCCcce--------EEEeeecCCCCcccC
Q 022831           18 KKDKRRLLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYF--------VVELTYNYGVTSYDI   89 (291)
Q Consensus        18 ~~~~~~i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~l~l~~~~~~~~~~~   89 (291)
                      ..|..+|.|+.|.|+|++++++||+++|||++...   ++..  ..++..+.....+        ...+....      .
T Consensus        20 ~gM~~~i~hv~l~v~Dl~~a~~FY~~vLG~~~~~~---~~~~--~~~~~~~~~~~~l~~~~~~~~~~~l~~~~------~   88 (148)
T 2r6u_A           20 QGMTGRIVHFEIPFDDGDRARAFYRDAFGWAIAEI---PDMD--YSMVTTGPVGESGMPDEPGYINGGMMQRG------E   88 (148)
T ss_dssp             STTCCCEEEEEEEESSHHHHHHHHHHHHCCEEEEE---TTTT--EEEEECSCBCTTSSBCSSSCBCEEEEESS------S
T ss_pred             cccCCceEEEEEEeCCHHHHHHHHHHccCcEEEEC---CCCC--EEEEEeCCcceeecccCCcccccceeecC------C
Confidence            34668999999999999999999999999999763   1222  4445543322111        01111110      1


Q ss_pred             CCCceEEEEEECCHHHHHHHHHHcCCeeeeCCccCC-CCceEEEEEECCCCcEEEEEecC
Q 022831           90 GTGFGHLAIATEDVYKMVENIRAKGGNVTREPGPLK-GMTTHFAFVKDPDGYIFELIQRG  148 (291)
Q Consensus        90 g~~~~~i~~~v~d~~~~~~~l~~~G~~~~~~~~~~~-~g~~~~~~~~dP~G~~iel~~~~  148 (291)
                      +.+ .|++|.|+|+++++++|+++|+++..++...+ +|  ..++++||+|+.|||++..
T Consensus        89 ~~g-~~l~f~v~dld~~~~~l~~~G~~~~~~~~~~~~~g--~~~~~~DPdG~~iel~~~~  145 (148)
T 2r6u_A           89 VTT-PVVTVDVESIESALERIESLGGKTVTGRTPVGNMG--FAAYFTDSEGNVVGLWETA  145 (148)
T ss_dssp             SCS-CEEEEECSCHHHHHHHHHHTTCEEEEEEEEETTTE--EEEEEECTTSCEEEEEEEC
T ss_pred             CCe-EEEEEEcCCHHHHHHHHHHcCCeEecCCeecCCCE--EEEEEECCCCCEEEEEecC
Confidence            134 49999999999999999999999887776665 34  4589999999999999865

>3sk2_A EHPR; antibiotic resistance, griseoluteate-binding protein; HET: GRI; 1.01A {Pantoea agglomerans} PDB: 3sk1_A*

Probab=99.71  E-value=1.4e-16  Score=118.65  Aligned_cols=115  Identities=11%  Similarity=0.047  Sum_probs=86.7

Q ss_pred             CCCceeeeeeeCCchhhHHHHHHhcCCeeeeeccCcccceeeeeeccCCCCcceEEEEeEecCceeeccCceeeEEEEEe
Q 022831          151 PEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAIST  230 (291)
Q Consensus       151 ~~~~~hv~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~~hia~~v  230 (291)
                      ..++.|+.|.|+|++++++||+++|||++....+    .+..  +..++   ...+.+...... .....++..|++|.|
T Consensus        11 ~~~i~~v~l~v~D~~~s~~FY~~~lG~~~~~~~~----~~~~--~~~~~---~~~l~l~~~~~~-~~~~~~~~~~~~~~v   80 (132)
T 3sk2_A           11 TITPNLQLVYVSNVERSTDFYRFIFKKEPVFVTP----RYVA--FPSSG---DALFAIWSGGEE-PVAEIPRFSEIGIML   80 (132)
T ss_dssp             CCCCCEEEEECSCHHHHHHHHHHHHTCCCSEECS----SEEE--EECST---TCEEEEESSSCC-CCTTSCCCEEEEEEE
T ss_pred             cceeeEEEEEECCHHHHHHHHHHHcCCeEEEcCC----CEEE--EEcCC---CcEEEEEeCCCC-CcCCCCCcceEEEEe
Confidence            3579999999999999999999999999876532    1222  22111   245555443211 112245778999999


Q ss_pred             cC---hHHHHHHHHHHHHh---hCCeeeecccccCCCCceEEEEECCCCCeEEEEec
Q 022831          231 DD---VYKSAEVVNLVTQE---LGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDN  281 (291)
Q Consensus       231 ~d---i~~~~~~l~~~~~~---~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iel~~~  281 (291)
                      +|   ++++++++    ++   +|+++..+|...+.  ++.++|+|||||+|||+++
T Consensus        81 ~~~~dv~~~~~~l----~~~~~~G~~~~~~p~~~~~--g~~~~~~DPdGn~iel~~~  131 (132)
T 3sk2_A           81 PTGEDVDKLFNEW----TKQKSHQIIVIKEPYTDVF--GRTFLISDPDGHIIRVCPL  131 (132)
T ss_dssp             SSHHHHHHHHHHH----HHCSSSCCEEEEEEEEETT--EEEEEEECTTCCEEEEEEC
T ss_pred             CCHHHHHHHHHHH----HhhhcCCCEEeeCCcccCc--eEEEEEECCCCCEEEEEeC
Confidence            86   99999999    99   99999988887765  3889999999999999985

>3rhe_A NAD-dependent benzaldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, SGX; 2.05A {Legionella pneumophila}

Probab=99.71  E-value=1.1e-16  Score=121.68  Aligned_cols=124  Identities=15%  Similarity=0.083  Sum_probs=85.0

Q ss_pred             CCceeeeeeeCCchhhHHHHHHhcCCeeeeeccCcccceeeeeeccCCCCcceEEEEeEecCceee-ccCceeeEEEEEe
Q 022831          152 EPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEY-TKGNAYAQVAIST  230 (291)
Q Consensus       152 ~~~~hv~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~-~~~~g~~hia~~v  230 (291)
                      .++.|+.|.|+|++++++||+++|||++....+    .+.  ++..++   ...+.+.......+. ...++..|++|.|
T Consensus         5 ~~i~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~----~~~--~~~~~~---g~~l~l~~~~~~~~~~~~~~~~~~l~f~v   75 (148)
T 3rhe_A            5 SDPNLVLFYVKNPAKSEEFYKNLLDTQPIESSP----TFA--MFVMKT---GLRLGLWAQEEIEPKAHQTGGGMELSFQV   75 (148)
T ss_dssp             --CEEEEEEESCHHHHHHHHHHHHTCCCSEECS----SEE--EEECTT---SCEEEEEEGGGCSSCCC----CEEEEEEC
T ss_pred             ccccEEEEEeCCHHHHHHHHHHHcCCEEeccCC----CEE--EEEcCC---CcEEEEecCCcCCccccCCCCeEEEEEEc
Confidence            468999999999999999999999999876532    122  233211   245666443222111 1234678999999


Q ss_pred             cC---hHHHHHHHHHHHHhhCCeeeecccccCCCCceEEEEECCCCCeEEEEechhhhhhhhc
Q 022831          231 DD---VYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNEDFLKELQS  290 (291)
Q Consensus       231 ~d---i~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~~~~~~~~~  290 (291)
                      +|   ++++++++    +++|+++..+|...+.  ++.+||+|||||.|||+++.+-..+.-|
T Consensus        76 ~d~~dvd~~~~~l----~~~G~~i~~~p~~~~~--G~~~~~~DPdG~~iel~~~~~~a~~~~~  132 (148)
T 3rhe_A           76 NSNEMVDEIHRQW----SDKEISIIQPPTQMDF--GYTFVGVDPDEHRLRIFCLKRTAENLYF  132 (148)
T ss_dssp             SCHHHHHHHHHHH----HHTTCCEEEEEEEETT--EEEEEEECTTCCEEEEEEEC--------
T ss_pred             CCHHHHHHHHHHH----HhCCCEEEeCCeecCC--CcEEEEECCCCCEEEEEEcChhHhhhhc
Confidence            87   99999999    9999999998887776  3889999999999999998776555443

>3ghj_A Putative integron gene cassette protein; integron cassette protein, mobIle metagenome, structural genomics, PSI-2; 1.47A {Uncultured bacterium}

Probab=99.71  E-value=1.6e-16  Score=119.79  Aligned_cols=113  Identities=14%  Similarity=0.210  Sum_probs=85.8

Q ss_pred             CCCceeeeeeeCCchhhHHHHHHhcCCeeeeeccCcccceeeeeeccCCCCcceEEEEeEecCceeeccCceeeEEEEEe
Q 022831          151 PEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAIST  230 (291)
Q Consensus       151 ~~~~~hv~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~~hia~~v  230 (291)
                      ..+|.|+.|.|+|++++++||+++|||++......  ..+..+.++  +  ....|.+....      ...+..|++|.|
T Consensus        26 i~~i~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~~~--~~~~~~~~~--~--~~~~l~l~~~~------~~~~~~h~~~~v   93 (141)
T 3ghj_A           26 IKGLFEVAVKVKNLEKSSQFYTEILGFEAGLLDSA--RRWNFLWVS--G--RAGMVVLQEEK------ENWQQQHFSFRV   93 (141)
T ss_dssp             CCCCCEEEEEESCHHHHHHHHHHTSCCEEEEEETT--TTEEEEEET--T--TTEEEEEEECC------SSCCCCEEEEEE
T ss_pred             eceecEEEEEeCCHHHHHHHHHHhcCCEEEEecCC--CcEEEEEec--C--CCcEEEEeccC------CCCCCceEEEEE
Confidence            35699999999999999999999999998776422  223333333  2  24667776531      134678999999


Q ss_pred             c--ChHHHHHHHHHHHHhhCCeeeecccccCCCCceEEEEECCCCCeEEEEe
Q 022831          231 D--DVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVD  280 (291)
Q Consensus       231 ~--di~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iel~~  280 (291)
                      +  |++++++++    +++|+++. .|...+.++.+.+||+|||||.|||++
T Consensus        94 ~~~dld~~~~~l----~~~G~~~~-~~~~~~~~~~~~~~~~DPdG~~iel~~  140 (141)
T 3ghj_A           94 EKSEIEPLKKAL----ESKGVSVH-GPVNQEWMQAVSLYFADPNGHALEFTA  140 (141)
T ss_dssp             CGGGHHHHHHHH----HHTTCCCE-EEEEEGGGTEEEEEEECTTCCEEEEEE
T ss_pred             eHHHHHHHHHHH----HHCCCeEe-CCcccCCCCceEEEEECCCCCEEEEEE
Confidence            7  999999999    99999988 444444445689999999999999986

>3itw_A Protein TIOX; bleomycin resistance fold, bisintercalator, solvent-exposed residue, thiocoraline, protein binding, peptide binding Pro; 2.15A {Micromonospora SP}

Probab=99.71  E-value=4.9e-16  Score=116.34  Aligned_cols=119  Identities=18%  Similarity=0.185  Sum_probs=86.5

Q ss_pred             eeEEEEeCCHHHHHHHHHHhcCCEEEEEeccCCCceeeEEeeccCCCcceEEEeeecCCCC--cccCCCCceEEEEEECC
Q 022831           25 LHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVT--SYDIGTGFGHLAIATED  102 (291)
Q Consensus        25 ~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~--~~~~g~~~~~i~~~v~d  102 (291)
                      -.+.|.|+|++++++||+++|||++......+ +......+..+  +.  .+.+.......  ....+.+..|++|.|+|
T Consensus         4 ~~i~l~v~D~~~a~~FY~~~lG~~~~~~~~~~-g~~~~~~l~~~--~~--~l~l~~~~~~~~~~~~~~~~~~~~~~~v~d   78 (137)
T 3itw_A            4 MVVELAYTDPDRAVDWLVRVFGFRLLLRQPAI-GTIRHADLDTG--GG--IVMVRRTGEPYTVSCAGGHTCKQVIVWVSD   78 (137)
T ss_dssp             CEEEEEESCHHHHHHHHHHHHCCEEEEEESSS-SSCSEEEEECS--SS--EEEEEETTCCSSCEECCCCCCCEEEEEESC
T ss_pred             EEEEEEECCHHHHHHHHHHccCCEEEEEecCC-CcEEEEEEecC--Ce--EEEEEecCCCcCccCCCCCcEEEEEEEeCC
Confidence            47899999999999999999999998765433 33334445433  22  34443322111  11122233499999999


Q ss_pred             HHHHHHHHHHcCCeeeeCCccCCCCceEEEEEECCCCcEEEEEecCC
Q 022831          103 VYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFELIQRGP  149 (291)
Q Consensus       103 ~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dP~G~~iel~~~~~  149 (291)
                      +++++++|+++|+++..++...++|.+ .++++||+||.|+|.+...
T Consensus        79 v~~~~~~l~~~G~~~~~~~~~~~~g~~-~~~~~DPdG~~iel~~~~~  124 (137)
T 3itw_A           79 VDEHFMRSTAAGADIVQPLQDKPWGLR-QYLVRDLEGHLWEFTRHLR  124 (137)
T ss_dssp             HHHHHHHHHHTTCEEEEEEEEETTTEE-EEEEECSSSCEEEEEECC-
T ss_pred             HHHHHHHHHHcCCeeccCccccCCCcE-EEEEECCCCCEEEEEEEcC
Confidence            999999999999999888877777654 5899999999999998754

>3e0r_A C3-degrading proteinase (CPPA protein); MCSG, PSI, SAD, structural GE protein structure initiative; 2.30A {Streptococcus pneumoniae}

Probab=99.71  E-value=4.8e-16  Score=124.08  Aligned_cols=206  Identities=13%  Similarity=0.089  Sum_probs=130.5

Q ss_pred             eeeEEEEeCCHHHHHHHHHHhcCCEEEEEeccCCCceeeEEeeccCCCcceEEEeeecCCCCcccCCCCceEE---EEEE
Q 022831           24 LLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHL---AIAT  100 (291)
Q Consensus        24 i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~g~~~~~i---~~~v  100 (291)
                      ..+..|.|.|++++.+||+++|||++..+...      .+.++.......++++-.+.  ... +.-.|..|+   ++.|
T Consensus        11 ~~~p~LrV~nr~~~~~FY~~vlG~kll~ee~~------~a~lg~~~~~~~L~lEEsp~--~~~-~~~~Glkh~a~i~i~v   81 (244)
T 3e0r_A           11 RIIPTLKANNRKLNETFYIETLGMKALLEESA------FLSLGDQTGLEKLVLEEAPS--MRT-RKVEGRKKLARLIVKV   81 (244)
T ss_dssp             EEEEEEEESSHHHHHHHHTTTTCCEEEEECSS------EEEEECTTCCEEEEEEECCT--TTC-BCCCSSCSEEEEEEEE
T ss_pred             EEeeEEEECCHHHHHHHHHhccCcEEeeccCc------EEEeecCCCcceEEEEeCCC--ccc-ccccccceeeeEEEEc
Confidence            56789999999999999999999999876543      67777533333333433221  111 223466666   6999


Q ss_pred             CCHHHHHHHHHHcCCeeeeCCccCCCCceEEEEEECCCCcEEEEEecCCC----------------------CCCceeee
Q 022831          101 EDVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFELIQRGPT----------------------PEPLCQVM  158 (291)
Q Consensus       101 ~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dP~G~~iel~~~~~~----------------------~~~~~hv~  158 (291)
                      ++.+++-+-| +++..+.. ......|  ..+|+.||+||.|++....+.                      ...+ |+.
T Consensus        82 p~~~el~~lL-~~~~~~~~-~~~gdhg--yA~yl~dPEGn~ieiyae~d~~~l~~v~~~~~l~~~~~~~gLs~fti-~I~  156 (244)
T 3e0r_A           82 ENPLEIEGIL-SKTDSIHR-LYKGQNG--YAFEIFSPEDDLILIHAEDDIASLVEVGEKPEFQTDLASISLSKFEI-SME  156 (244)
T ss_dssp             SSHHHHHHHH-TTCSCCSE-EEECSSS--EEEEEECTTCCEEEEECCSCGGGCEECSSCCCCCCCCSCCCCSSEEE-EEE
T ss_pred             CCHHHHHHHH-hccccccc-ccccCCc--EEEEEECCCCCeEEEEEcCCHHHhhcccchhhccccccccCCCCcEE-EEE
Confidence            9987764444 33555421 1122233  347899999999999876531                      1237 999


Q ss_pred             eeeCCchhhHHHHHHhcCCeeeeeccCcccceeeeeeccCCCCcceEEEEeEecCceeeccCceeeEEEEEec--ChHHH
Q 022831          159 LRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAISTD--DVYKS  236 (291)
Q Consensus       159 l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~~hia~~v~--di~~~  236 (291)
                      |+|+|.+++  ||.+ +|+.           ..+.|....+.+-      .     .+....-|+-.+.|.|+  |+.++
T Consensus       157 LnV~d~~~s--Fy~~-~~~~-----------~~~~F~~a~G~dl------~-----~~~~~t~gLe~l~~~v~~~dl~~l  211 (244)
T 3e0r_A          157 LHLPTDIES--FLES-SEIG-----------ASLDFIPAQGQDL------T-----VDNTVTWDLSMLKFLVNELDIASL  211 (244)
T ss_dssp             EEECTTCCC--SCCH-HHHT-----------TTEEEEECCCTTT------T-----CCTTSBSSEEEEEEEESSCCHHHH
T ss_pred             EEcCchHHH--Hhhc-cCCc-----------ccEEEEcccCCCC------C-----CCCCCccCceEEEEEeCHHHHHHH
Confidence            999999998  9976 4431           1233333211110      0     01111237788888885  36677


Q ss_pred             HHHHHHHHHhhCCeeeecccccCCCCceEEEEECCCCCeEEEEe
Q 022831          237 AEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVD  280 (291)
Q Consensus       237 ~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iel~~  280 (291)
                      .+++    ++.|..+..        ...++.+.||+|+.|+|.+
T Consensus       212 ~~~L----~~~g~~idk--------k~~~l~~~DpsgIeiwF~~  243 (244)
T 3e0r_A          212 RQKF----ESTEYFIPK--------SEKFFLGKDRNNVELWFEE  243 (244)
T ss_dssp             HHHT----TTSCEECCT--------TCCEEEEECTTSCEEEEEE
T ss_pred             HHHH----HhCCceEcc--------cCCEEEEECCCCCEEEEEE
Confidence            7777    877763321        2567889999999999975

>2a4x_A Mitomycin-binding protein; ALFA/beta protein, mitomycin C-binding protein, bleomycin A2, antimicrobial protein; HET: BLM; 1.40A {Streptomyces caespitosus} SCOP: d.32.1.2 PDB: 2a4w_A* 1kmz_A 1kll_A*

Probab=99.71  E-value=1.3e-16  Score=119.79  Aligned_cols=120  Identities=18%  Similarity=0.160  Sum_probs=87.4

Q ss_pred             CccceeeEEEEeCCHHHHHHHHHHhcCCEEEEEeccCCCceeeEEeeccCCCcceEEEeeecC------CCCcccCCCCc
Q 022831           20 DKRRLLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNY------GVTSYDIGTGF   93 (291)
Q Consensus        20 ~~~~i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~------~~~~~~~g~~~   93 (291)
                      |+++|.|+.|.|+|++++++||++ |||++.....  ...  ...+..+ ++  ..+.+....      .......+.+.
T Consensus         1 M~~~l~hv~l~v~D~~~a~~FY~~-LG~~~~~~~~--~~~--~~~~~~~-~~--~~l~l~~~~~~~~~~~~~~~~~~~~~   72 (138)
T 2a4x_A            1 MSARISLFAVVVEDMAKSLEFYRK-LGVEIPAEAD--SAP--HTEAVLD-GG--IRLAWDTVETVRSYDPEWQAPTGGHR   72 (138)
T ss_dssp             -CCEEEEEEEEESCHHHHHHHHHT-TTCCCCGGGG--GCS--EEEEECT-TS--CEEEEEEHHHHHHHCTTCCCCBSSCS
T ss_pred             CcceeeEEEEEECCHHHHHHHHHH-cCCcEEecCC--CCc--eEEEEcC-CC--eEEEEecCccchhhCcccCCCCCCCe
Confidence            568999999999999999999998 9999864321  111  3334331 22  334444321      11111233477


Q ss_pred             eEEEEEEC---CHHHHHHHHHHcCCeeeeCCccCCCCceEEEEEECCCCcEEEEEecC
Q 022831           94 GHLAIATE---DVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFELIQRG  148 (291)
Q Consensus        94 ~~i~~~v~---d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dP~G~~iel~~~~  148 (291)
                      .|++|.|+   |+++++++|+++|+++..++...++|.+ .++++||+|+.|||.+..
T Consensus        73 ~~l~f~v~~~~dv~~~~~~l~~~G~~~~~~~~~~~~g~~-~~~~~DPdG~~iel~~~~  129 (138)
T 2a4x_A           73 FAIAFEFPDTASVDKKYAELVDAGYEGHLKPWNAVWGQR-YAIVKDPDGNVVDLFAPL  129 (138)
T ss_dssp             EEEEEECSSHHHHHHHHHHHHHTTCCEEEEEEEETTTEE-EEEEECTTCCEEEEEEEC
T ss_pred             EEEEEEeCCHHHHHHHHHHHHHCCCceeeCCcccCCCcE-EEEEECCCCCEEEEEeCC
Confidence            89999999   9999999999999998877777777644 588999999999999877

>3r6a_A Uncharacterized protein; PSI biology, structural genomics, NEW YORK structural genomi research consortium, putative glyoxalase I; 1.76A {Methanosarcina mazei}

Probab=99.70  E-value=8.6e-17  Score=121.68  Aligned_cols=112  Identities=23%  Similarity=0.301  Sum_probs=84.6

Q ss_pred             eeeeeCCchhhHHHHHHhcCCeeeeeccCcccceeeeeeccCCCCcceEEEEeEecCceeeccCceeeEEEEEecChHHH
Q 022831          157 VMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAISTDDVYKS  236 (291)
Q Consensus       157 v~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~~hia~~v~di~~~  236 (291)
                      +.|.|+|++++++||+++|||++..+...++..+.+...+      .  +.+......  .....+..|++|.|+|++++
T Consensus        10 i~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~~~------~--~~l~~~~~~--~~~~~~~~hl~f~V~d~d~~   79 (144)
T 3r6a_A           10 SRLYVADLNPALEFYEELLETPVAMRFEIPQTGVELAQIS------T--ILLIAGSEE--ALKPFRNTQATFLVDSLDKF   79 (144)
T ss_dssp             EEEEESCHHHHHHHHHHHTTCCCCEECCCSCSSCEEEEET------T--EEEEESCHH--HHGGGGGCCEEEEESCHHHH
T ss_pred             EEEEECCHHHHHHHHHHhcCCEEEEEeccCCccEEEEEec------c--EEEecCCcc--cCCCCcceEEEEEeCCHHHH
Confidence            8899999999999999999999877654333334444433      1  333332111  11123568999999999999


Q ss_pred             HHHHHHHHHhhCCeeeecccccCCCCceEEEEECCCCCeEEEEechhh
Q 022831          237 AEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNEDF  284 (291)
Q Consensus       237 ~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~~~  284 (291)
                      ++++    +++|+++..+|...++  ++.+||+|||||.|||+++.+.
T Consensus        80 ~~~l----~~~G~~v~~~p~~~~~--G~~~~~~DPdG~~iel~~~~~~  121 (144)
T 3r6a_A           80 KTFL----EENGAEIIRGPSKVPT--GRNMTVRHSDGSVIEYVEHSKI  121 (144)
T ss_dssp             HHHH----HHTTCEEEEEEEEETT--EEEEEEECTTSCEEEEEEECC-
T ss_pred             HHHH----HHcCCEEecCCccCCC--ceEEEEECCCCCEEEEEEcCCc
Confidence            9999    9999999998887776  4889999999999999997653

>2qqz_A Glyoxalase family protein, putative; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; HET: MSE; 1.92A {Bacillus anthracis str}

Probab=99.70  E-value=1.7e-16  Score=117.02  Aligned_cols=115  Identities=12%  Similarity=0.154  Sum_probs=85.1

Q ss_pred             CCceeeeeee--CCchhhHHHHHHhcCCeeeeeccCcccceeeeeeccCCCCcceEEEEeEecCceeeccCceeeEEEEE
Q 022831          152 EPLCQVMLRV--GDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAIS  229 (291)
Q Consensus       152 ~~~~hv~l~v--~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~~hia~~  229 (291)
                      .++.|+.|.|  +|++++.+||+++|||++........+. ...++..+    ...+.+......    ...+.+|++|.
T Consensus         9 ~~i~hv~l~v~~~D~~~a~~FY~~~lG~~~~~~~~~~~~~-~~~~~~~~----~~~l~l~~~~~~----~~~~~~~~~f~   79 (126)
T 2qqz_A            9 QGIDHVQVAAPVGCEEEARAFYGETIGMEEIPKPEELKKR-GGCWFKCG----NQEIHIGVEQNF----NPAKRAHPAFY   79 (126)
T ss_dssp             EEEEEEEEEECTTTHHHHHHHHTTTTCCEEECCCGGGGGG-CCEEEEET----TEEEEEEECTTC----CCCSSSCEEEE
T ss_pred             ceeeeEEEEcccccHHHHHHHHHhcCCCEEecCcccccCC-CceEEEeC----CEEEEEEecCCC----CCCCceEEEEE
Confidence            3589999999  8999999999999999987653211000 11233332    245666543221    13477999999


Q ss_pred             ecChHHHHHHHHHHHHhhCCeeeecccccCCCCceEEEEECCCCCeEEEEech
Q 022831          230 TDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNE  282 (291)
Q Consensus       230 v~di~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~  282 (291)
                      |+|++++++++    +++|+++..+|. .+  +.+.+||+|||||.|||+++.
T Consensus        80 v~d~~~~~~~l----~~~G~~~~~~~~-~~--g~~~~~~~DPdG~~iel~~~~  125 (126)
T 2qqz_A           80 VLKIDEFKQEL----IKQGIEVIDDHA-RP--DVIRFYVSDPFGNRIEFMENK  125 (126)
T ss_dssp             ETTHHHHHHHH----HHTTCCCEEECS-ST--TEEEEEEECTTSCEEEEEEEC
T ss_pred             cCCHHHHHHHH----HHcCCCccCCCC-CC--CeeEEEEECCCCCEEEEEeCC
Confidence            99999999999    999999988773 33  468899999999999999864

>3huh_A Virulence protein STM3117; structural genomics, nysgrc, target 13955A1BCT15P1, dioxygen virulence, PSI-2, protein structure initiative; 1.50A {Salmonella enterica subsp} PDB: 3hnq_A

Probab=99.70  E-value=1.4e-16  Score=121.60  Aligned_cols=120  Identities=18%  Similarity=0.213  Sum_probs=86.5

Q ss_pred             CCceeeeeeeCCchhhHHHHHHhcCCeeeeeccCcccceeeeeeccCCCCcceEEEEeEecCc---eeeccCceeeEEEE
Q 022831          152 EPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGV---TEYTKGNAYAQVAI  228 (291)
Q Consensus       152 ~~~~hv~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~---~~~~~~~g~~hia~  228 (291)
                      .++.|+.|.|+|++++++||+++|||++....+    .+  .++..+    ...+.+......   .......|..|++|
T Consensus        22 ~~l~hv~l~v~D~~~a~~FY~~vLG~~~~~~~~----~~--~~l~~~----~~~l~l~~~~~~~~~~~~~~~~g~~hi~f   91 (152)
T 3huh_A           22 DRIDHLVLTVSDISTTIRFYEEVLGFSAVTFKQ----NR--KALIFG----AQKINLHQQEMEFEPKASRPTPGSADLCF   91 (152)
T ss_dssp             EEEEEEEEEESCHHHHHHHHHHTTCCEEEEETT----TE--EEEEET----TEEEEEEETTBCCSSCCSSCCTTCCEEEE
T ss_pred             ceeeEEEEEeCCHHHHHHHHHhcCCCEEEEccC----Ce--EEEEeC----CeEEEEeccCCcCCCcCcCCCCCccEEEE
Confidence            468999999999999999999999999877621    12  223322    244555442211   01123457899999


Q ss_pred             Eec-ChHHHHHHHHHHHHhhCCeeeecccccCCCC--ceEEEEECCCCCeEEEEechhhh
Q 022831          229 STD-DVYKSAEVVNLVTQELGGKITRQPGPIPGLN--TKITSFVDPDGWKTVLVDNEDFL  285 (291)
Q Consensus       229 ~v~-di~~~~~~l~~~~~~~G~~~~~~p~~~~~~~--~~~~~~~DPdG~~iel~~~~~~~  285 (291)
                      .++ |++++++++    +++|+++..+|...++..  .+.+||+|||||.|||++..+..
T Consensus        92 ~~~~dl~~~~~~l----~~~G~~~~~~p~~~~~~~g~~~~~~~~DPdG~~iEl~~~~~~~  147 (152)
T 3huh_A           92 ITSTPINDVVSEI----LQAGISIVEGPVERTGATGEIMSIYIRDPDGNLIEISQYVEGH  147 (152)
T ss_dssp             EESSCHHHHHHHH----HHTTCCCSEEEEEEEETTEEEEEEEEECTTCCEEEEEEC----
T ss_pred             EecCCHHHHHHHH----HHCCCeEecCCccccCCCCcEEEEEEECCCCCEEEEEecccCc
Confidence            997 999999999    999999988876544322  37899999999999999977643

>3r4q_A Lactoylglutathione lyase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.51A {Agrobacterium tumefaciens}

Probab=99.70  E-value=1.3e-16  Score=122.92  Aligned_cols=119  Identities=18%  Similarity=0.240  Sum_probs=86.5

Q ss_pred             CCccceeeEEEEeCCHHHHHHHHHHhcCCEEEEEeccCCCceeeEEeeccCCCcceEEEeeecCC--------CCcccCC
Q 022831           19 KDKRRLLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYG--------VTSYDIG   90 (291)
Q Consensus        19 ~~~~~i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~--------~~~~~~g   90 (291)
                      |++.+|.||.|.|+|++++++||+++|||++......     ...++..+.  .  .+.+.....        ..+...+
T Consensus         4 ~~i~~l~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~-----~~~~~~~g~--~--~~~l~~~~~~~~~~~~~~~~~~~~   74 (160)
T 3r4q_A            4 KPPSAIMETALYADDLDAAEAFYRDVFGLEMVLKLPG-----QLVFFKCGR--Q--MLLLFDPQESSRADANNPIPRHGA   74 (160)
T ss_dssp             CCCSCEEEEEEECSCHHHHHHHHHHHSCCEEEEEETT-----TEEEEEETT--E--EEEEECHHHHTCCCTTCCSCCCEE
T ss_pred             cccccccEEEEEeCCHHHHHHHHHHhcCCEEEEecCC-----cEEEEeCCC--E--EEEEEecCCccCccccCCCCcCCC
Confidence            5689999999999999999999999999999875432     144554432  2  233332111        1111223


Q ss_pred             CCceEEEEEE---CCHHHHHHHHHHcCCeeeeCCccCCCCceEEEEEECCCCcEEEEEecC
Q 022831           91 TGFGHLAIAT---EDVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFELIQRG  148 (291)
Q Consensus        91 ~~~~~i~~~v---~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dP~G~~iel~~~~  148 (291)
                      .+..|++|.|   +|+++++++|+++|+++..++. ..+|.+ .++++||+|+.|||++..
T Consensus        75 ~g~~hi~f~V~~~~dld~~~~~l~~~G~~~~~~~~-~~~g~~-~~~~~DPdG~~iel~~~~  133 (160)
T 3r4q_A           75 VGQGHFCFYADDKAEVDEWKTRFEALEIPVEHYHR-WPNGSY-SVYIRDPAGNSVEVGEGK  133 (160)
T ss_dssp             EEECEEEEEESSHHHHHHHHHHHHTTTCCCCEEEE-CTTSCE-EEEEECTTCCEEEEEEGG
T ss_pred             cceeEEEEEeCCHHHHHHHHHHHHHCCCEEecccc-ccCCcE-EEEEECCCCCEEEEEeCC
Confidence            4678999999   8999999999999999875443 233434 589999999999999976

>1twu_A Hypothetical protein YYCE; structural genomics, protein structure initiative, MCSG, DUP of the alpha-beta sandwichs. bacillus subtilis, PSI; 2.00A {Bacillus subtilis} SCOP: d.32.1.8

Probab=99.70  E-value=1.2e-16  Score=119.97  Aligned_cols=120  Identities=18%  Similarity=0.297  Sum_probs=85.7

Q ss_pred             CCceeeeeeeCCchhhHHHHHHhcCCeeeeeccCcccceeeeeeccCCCCcceEEEEeEecCceeeccCceeeEEEEEec
Q 022831          152 EPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAISTD  231 (291)
Q Consensus       152 ~~~~hv~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~~hia~~v~  231 (291)
                      ..+.++.|.|+|++++.+||+++|||++...... ++.+...+++.++.  ...|++....+..+...+.+..|++|.|+
T Consensus        10 ~~~~~i~l~v~Dl~~s~~FY~~~LG~~~~~~~~~-~~~~~~~~~~~~~~--~~~l~l~~~~~~~~~~~~~~~~hi~~~v~   86 (139)
T 1twu_A           10 AAQIRIARPTGQLDEIIRFYEEGLCLKRIGEFSQ-HNGYDGVMFGLPHA--DYHLEFTQYEGGSTAPVPHPDSLLVFYVP   86 (139)
T ss_dssp             CSCEEEEEECSCHHHHHHHHTTTSCCCEEEEEEE-ETTEEEEEEESSSS--SEEEEEEEETTCCCCCCCCTTCEEEEECC
T ss_pred             cceeEEeeEeCCHHHHHHHHHhcCCcEEEEeccC-CCCeeEEEEecCCC--ceEEEEeecCCCCCCCCCCCccEEEEEeC
Confidence            3467889999999999999999999998765422 23355566664422  34567655433322233457789999999


Q ss_pred             Ch---HHHHHHHHHHHHhhCCeeee--cccccCCCCceEEEEECCCCCeEEEEech
Q 022831          232 DV---YKSAEVVNLVTQELGGKITR--QPGPIPGLNTKITSFVDPDGWKTVLVDNE  282 (291)
Q Consensus       232 di---~~~~~~l~~~~~~~G~~~~~--~p~~~~~~~~~~~~~~DPdG~~iel~~~~  282 (291)
                      |+   ++++++|    +++|+++..  .|.....  +  .||+|||||.|||+++.
T Consensus        87 d~~~l~~~~~~l----~~~G~~~~~~~~~~~~~~--g--~~~~DPdG~~iel~~~~  134 (139)
T 1twu_A           87 NAVELAAITSKL----KHMGYQEVESENPYWSNG--G--VTIEDPDGWRIVFMNSK  134 (139)
T ss_dssp             CHHHHHHHHHHH----HHTTCCEECCSSHHHHSS--E--EEEECTTCCEEEEESSC
T ss_pred             CcchHHHHHHHH----HHcCCcCcCCCCcccCCC--C--eEEECCCCCEEEEEEcC
Confidence            99   8999999    999999873  3322222  2  26999999999999863

>3rri_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-biology, midwest center for structu genomics; 1.50A {Alicyclobacillus acidocaldarius subsp}

Probab=99.70  E-value=7.8e-16  Score=114.83  Aligned_cols=117  Identities=16%  Similarity=0.205  Sum_probs=83.0

Q ss_pred             ccceeeEEEEeCCHHHHHHHHHHhcCCEEEEEeccCCCceeeEEeeccCCCcceEEEeeecCCCCcccCCCCceEEEEEE
Q 022831           21 KRRLLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHLAIAT  100 (291)
Q Consensus        21 ~~~i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~g~~~~~i~~~v  100 (291)
                      .++|+||.|.|+|++++++||+++|||++.....    .  ...+..+.  ..+.+.+..... .+  ...+..|++|.+
T Consensus         7 ~~~i~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~~----~--~~~~~~~g--~~~~l~~~~~~~-~~--~~~~~~h~~~~~   75 (135)
T 3rri_A            7 PNDVFHLAIPARDLDEAYDFYVTKLGCKLARRYP----D--RITLDFFG--DQLVCHLSDRWD-RE--VSMYPRHFGITF   75 (135)
T ss_dssp             TTSEEEEEEEESCHHHHHHHHTTTTCCEEEEEET----T--EEEEEETT--EEEEEEECSCSC-SS--CCSSSCEEEEEC
T ss_pred             CCccceEEEEcCCHHHHHHHHHHhcCCEeeccCC----C--cEEEEEeC--CEEEEEEcCccc-cc--CCCCCCeEEEEE
Confidence            5789999999999999999999999999965432    1  33444322  223333322211 11  233567999998


Q ss_pred             C---CHHHHHHHHHHcCCeeeeCCccC---CCCceEEEEEECCCCcEEEEEecC
Q 022831          101 E---DVYKMVENIRAKGGNVTREPGPL---KGMTTHFAFVKDPDGYIFELIQRG  148 (291)
Q Consensus       101 ~---d~~~~~~~l~~~G~~~~~~~~~~---~~g~~~~~~~~dP~G~~iel~~~~  148 (291)
                      .   |+++++++|+++|+++..+|...   ..+....+||+||+||.|||.+..
T Consensus        76 ~~~~d~~~~~~~l~~~G~~~~~~p~~~~~~~~~~~~~~~~~DPdGn~iel~~~~  129 (135)
T 3rri_A           76 RDKKHFDNLYKLAKQRGIPFYHDLSRRFEGLIEEHETFFLIDPSNNLLEFKYYF  129 (135)
T ss_dssp             SSHHHHHHHHHHHHHTTCCEEEEEEEESTTSTTCEEEEEEECTTCCEEEEEEES
T ss_pred             cChHhHHHHHHHHHHcCCceecCcccccCCCCCceEEEEEECCCCCEEEEEEEC
Confidence            5   59999999999999987666543   122334589999999999998764

>1xrk_A Bleomycin resistance protein; arm exchange, ligand binding protein, thermostable mutant, antibiotic inhibitor; HET: BLM; 1.50A {Streptoalloteichus hindustanus} SCOP: d.32.1.2 PDB: 2zhp_A* 1byl_A

Probab=99.70  E-value=5.5e-16  Score=114.09  Aligned_cols=114  Identities=9%  Similarity=0.028  Sum_probs=85.2

Q ss_pred             CCccceeeEEEEeCCHHHHHHHHHHhcCCEEEEEeccCCCceeeEEeeccCCCcceEEEeeecCCCCcccCCCCceEEEE
Q 022831           19 KDKRRLLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHLAI   98 (291)
Q Consensus        19 ~~~~~i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~g~~~~~i~~   98 (291)
                      |+.....|+.|.|+|++++.+||+++|||++....   + .  ..++..+  +  ..+.+......    ...+..|++|
T Consensus         1 m~~~~~~~~~l~v~D~~~a~~FY~~~lG~~~~~~~---~-~--~~~~~~~--~--~~l~l~~~~~~----~~~~~~~~~~   66 (124)
T 1xrk_A            1 MAKLTSAVPVLTARDVAEAVEFWTDRLGFSRVFVE---D-D--FAGVVRD--D--VTLFISAVQDQ----VVPDNTQAWV   66 (124)
T ss_dssp             -CEEEEEEEEEEESCHHHHHHHHHHTTCCEEEEEC---S-S--EEEEEET--T--EEEEEEECSCT----TTGGGCEEEE
T ss_pred             CCcccceeEEEEcCCHHHHHHHHHHccCceEEecC---C-C--EEEEEEC--C--EEEEEEcCCCC----CCCCceEEEE
Confidence            44566789999999999999999999999998651   1 2  3445433  2  23444433221    1124469999


Q ss_pred             EECCHHHHHHHHHHc------CC--eeeeCCccCCCCceEEEEEECCCCcEEEEEecC
Q 022831           99 ATEDVYKMVENIRAK------GG--NVTREPGPLKGMTTHFAFVKDPDGYIFELIQRG  148 (291)
Q Consensus        99 ~v~d~~~~~~~l~~~------G~--~~~~~~~~~~~g~~~~~~~~dP~G~~iel~~~~  148 (291)
                      .|+|+++++++|+++      |+  ++..++...++| + .++++||+||.|+|.+..
T Consensus        67 ~v~dv~~~~~~l~~~~~~~~~G~~~~~~~~~~~~~~g-~-~~~~~DPdG~~iel~~~~  122 (124)
T 1xrk_A           67 WVRGLDELYAEWSEVVSTNFRDASGPAMTEIVEQPWG-R-EFALRDPAGNCVHFVAEE  122 (124)
T ss_dssp             EEECHHHHHHHHTTTSBSCTTTCSSCEECCCEEETTE-E-EEEEECTTCCEEEEEEC-
T ss_pred             EECCHHHHHHHHHHhcccccCCccccccCCceecCCC-C-EEEEECCCCCEEEEEEec
Confidence            999999999999999      99  888788777776 4 588999999999999864

>2i7r_A Conserved domain protein; structural genomics conserved domain, PSI-2, protein structure initiative; 2.20A {Streptococcus pneumoniae} SCOP: d.32.1.2

Probab=99.70  E-value=1.7e-16  Score=115.61  Aligned_cols=113  Identities=19%  Similarity=0.105  Sum_probs=82.1

Q ss_pred             CceeeeeeeCCchhhHHHHHHhcCCeeeeeccCcccceeeeeeccCCCCcceEEEEeEecCceeeccCceeeEEEEEecC
Q 022831          153 PLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAISTDD  232 (291)
Q Consensus       153 ~~~hv~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~~hia~~v~d  232 (291)
                      ++.|+.|.|+|++++.+||+++|||++....+    .+  ..+..++    ..+.+...........+.+ .|++|.|+|
T Consensus         5 ~i~~v~l~v~D~~~a~~FY~~~lG~~~~~~~~----~~--~~~~~~~----~~l~l~~~~~~~~~~~~~~-~~~~~~v~d   73 (118)
T 2i7r_A            5 NLNQLDIIVSNVPQVCADLEHILDKKADYAND----GF--AQFTIGS----HCLMLSQNHLVPLENFQSG-IIIHIEVED   73 (118)
T ss_dssp             EEEEEEEECSCHHHHHHHHHHHHTSCCSEEET----TE--EEEEETT----EEEEEESSCSSSCCCCCSC-EEEEEECSC
T ss_pred             eeeEEEEEeCCHHHHHHHHHHHhCCeeEEeCC----CE--EEEEeCC----eEEEEEcCCCCCcccCCCe-EEEEEEECC
Confidence            58899999999999999999999999865321    12  2233221    2333322111110112334 589999999


Q ss_pred             hHHHHHHHHHHHHhhCCeeeecccccCCCCceEEEEECCCCCeEEEEec
Q 022831          233 VYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDN  281 (291)
Q Consensus       233 i~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iel~~~  281 (291)
                      ++++++++    +++|+++..+|...+. +.+.++++|||||.|||++.
T Consensus        74 ~~~~~~~l----~~~G~~~~~~~~~~~~-g~~~~~~~DPdG~~iel~~~  117 (118)
T 2i7r_A           74 VDQNYKRL----NELGIKVLHGPTVTDW-GTESLLVQGPAGLVLDFYRM  117 (118)
T ss_dssp             HHHHHHHH----HHHTCCEEEEEEECTT-SCEEEEEECGGGCEEEEEEC
T ss_pred             HHHHHHHH----HHCCCceecCCccccC-ccEEEEEECCCccEEEEEec
Confidence            99999999    9999999888877665 46889999999999999975

>2p7o_A Glyoxalase family protein; fosfomycin resistance protein, Mn binding, antibiotic resist metal binding protein, hydrolase; 1.44A {Listeria monocytogenes} PDB: 2p7k_A 2p7l_A 2p7m_A 2p7p_A 2p7q_A

Probab=99.69  E-value=3.4e-16  Score=116.43  Aligned_cols=117  Identities=16%  Similarity=0.228  Sum_probs=85.5

Q ss_pred             CCceeeeeeeCCchhhHHHHHHhcCCeeeeeccCcccceee---eeeccCCCCcceEEEEeEecCceeeccCceeeEEEE
Q 022831          152 EPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCAL---AMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAI  228 (291)
Q Consensus       152 ~~~~hv~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~~hia~  228 (291)
                      .++.|+.|.|+|++++.+||+++|||++....+  +..+..   .++..+    ...+.+......    ...+.+|++|
T Consensus         3 ~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~--~~~~~~~~~~~~~~~----~~~l~l~~~~~~----~~~~~~h~~~   72 (133)
T 2p7o_A            3 SGLSHITLIVKDLNKTTAFLQNIFNAEEIYSSG--DKTFSLSKEKFFLIA----GLWICIMEGDSL----QERTYNHIAF   72 (133)
T ss_dssp             CEEEEEEEEESCHHHHHHHHHHHHCCEECC-------CCCSSCEEEEEET----TEEEEEEECSSC----CCCCSCEEEE
T ss_pred             ceEEEEEEEcCCHHHHHHHHHHhcCCEEeeecC--CcccccCCceEEEeC----CEEEEEecCCCC----CCCCeeEEEE
Confidence            358999999999999999999999999875432  111110   023322    245666543221    1457899999


Q ss_pred             Ee--cChHHHHHHHHHHHHhhCCeeeecccccCCCCceEEEEECCCCCeEEEEechh
Q 022831          229 ST--DDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNED  283 (291)
Q Consensus       229 ~v--~di~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~~  283 (291)
                      .|  +|++++++++    +++|+++..+|...++ +++.+|++|||||.|||+++..
T Consensus        73 ~v~~~d~~~~~~~l----~~~G~~~~~~~~~~~~-~~~~~~~~DPdG~~iel~~~~~  124 (133)
T 2p7o_A           73 QIQSEEVDEYTERI----KALGVEMKPERPRVQG-EGRSIYFYDFDNHLFELHAGTL  124 (133)
T ss_dssp             ECCGGGHHHHHHHH----HHHTCCEECCCCCCTT-CCCEEEEECSSSCEEEEECSSC
T ss_pred             EcCHHHHHHHHHHH----HHCCCcccCCCccCCC-CeeEEEEECCCCCEEEEEcCCh
Confidence            99  5999999999    9999999888765544 4688999999999999999653

>3ct8_A Protein BH2160, putative glyoxalase; NP_243026.1, glyoxalase/bleomycin resis protein/dioxygenase superfamily, structural genomics; HET: UNL; 2.10A {Bacillus halodurans c-125}

Probab=99.69  E-value=8.2e-16  Score=116.57  Aligned_cols=119  Identities=18%  Similarity=0.325  Sum_probs=87.0

Q ss_pred             cCCccceeeEEEEeCCHHHHHHHH---HHhcCCEEEEEeccCCCceeeEEeeccCCCcceEEEeeecCC---CCccc-CC
Q 022831           18 KKDKRRLLHAVYRVGDLDRTIKYY---TECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYG---VTSYD-IG   90 (291)
Q Consensus        18 ~~~~~~i~hv~l~v~d~~~~~~FY---~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~---~~~~~-~g   90 (291)
                      .+++.+|.|+.|.|+|++++++||   +++|||++......  +   ..|+. +  +  ..+.+.....   ..+.. ..
T Consensus        15 ~~~~~~i~hv~l~v~Dl~~a~~FY~~~~~~LG~~~~~~~~~--~---~~~~~-g--~--~~l~l~~~~~~~~~~~~~~~~   84 (146)
T 3ct8_A           15 LYFQGMLHHVEINVDHLEESIAFWDWLLGELGYEDYQSWSR--G---KSYKH-G--K--TYLVFVQTEDRFQTPTFHRKR   84 (146)
T ss_dssp             TTTTTSCCEEEEEESCHHHHHHHHHHHHHHTTCEEEEEETT--E---EEEEE-T--T--EEEEEEECCGGGSCSCCCTTS
T ss_pred             cccccceeEEEEEeCCHHHHHHHHHhhhhhCCCEEEEecCC--C---ceEec-C--C--eEEEEEEcCCCcccccccccC
Confidence            478899999999999999999999   99999999765431  1   23443 2  2  3455554322   11111 23


Q ss_pred             CCceEEEEEEC---CHHHHHHHHHHcCCeeee-CCccCCCC-ceEEEEEECCCCcEEEEEe
Q 022831           91 TGFGHLAIATE---DVYKMVENIRAKGGNVTR-EPGPLKGM-TTHFAFVKDPDGYIFELIQ  146 (291)
Q Consensus        91 ~~~~~i~~~v~---d~~~~~~~l~~~G~~~~~-~~~~~~~g-~~~~~~~~dP~G~~iel~~  146 (291)
                      .+..|++|.|+   |+++++++|+++|+++.. .|....++ ....+|++||+|+.|||++
T Consensus        85 ~g~~hi~f~v~~~~dv~~~~~~l~~~G~~~~~~~p~~~~~g~~~~~~~~~DPdG~~iel~~  145 (146)
T 3ct8_A           85 TGLNHLAFHAASREKVDELTQKLKERGDPILYEDRHPFAGGPNHYAVFCEDPNRIKVEIVA  145 (146)
T ss_dssp             SSCCEEEEECSCHHHHHHHHHHHHHHTCCBCCTTTTTCTTCTTCCEEEEECTTCCEEEEEC
T ss_pred             CCceEEEEECCCHHHHHHHHHHHHHcCCccccCCCccccCCCceEEEEEECCCCCEEEEEe
Confidence            47789999999   999999999999999876 35544332 1235889999999999986

>2kjz_A ATC0852; protein of unknown function, dimer, structural genomics, PSI protein structure initiative; NMR {Agrobacterium tumefaciens}

Probab=99.69  E-value=2.2e-16  Score=119.47  Aligned_cols=116  Identities=16%  Similarity=0.136  Sum_probs=86.6

Q ss_pred             CCceeeeeeeCCchhhHHHHHHhcCCeeeeeccCcccceeeeeeccCCCCcceEEEEeEecCceee-ccCceeeEEEEEe
Q 022831          152 EPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEY-TKGNAYAQVAIST  230 (291)
Q Consensus       152 ~~~~hv~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~-~~~~g~~hia~~v  230 (291)
                      .++.|+.|.|+|++++.+||+++|||++....+    .+.  ++..++   ...|.|.......+. ..+.+..|++|.|
T Consensus        24 ~~l~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~~----~~~--~~~~~~---~~~l~l~~~~~~~~~~~~~~~~~hl~f~v   94 (144)
T 2kjz_A           24 THPDFTILYVDNPPASTQFYKALLGVDPVESSP----TFS--LFVLAN---GMKLGLWSRHTVEPKASVTGGGGELAFRV   94 (144)
T ss_dssp             CCCCEEEEEESCHHHHHHHHHHHHTCCCSEEET----TEE--EEECTT---SCEEEEEETTSCSSCCCCSSSSCEEEEEC
T ss_pred             CceeEEEEEeCCHHHHHHHHHHccCCEeccCCC----CeE--EEEcCC---CcEEEEEeCCCCCCccCCCCCceEEEEEe
Confidence            379999999999999999999999999876531    132  223222   245666543221111 1235789999999


Q ss_pred             c---ChHHHHHHHHHHHHhhCCeeeecccccCCCCceEEEEECCCCCeEEEEech
Q 022831          231 D---DVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNE  282 (291)
Q Consensus       231 ~---di~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~  282 (291)
                      +   |++++++++    +++|+++..+|...++  ++.+||+|||||.|||+++.
T Consensus        95 ~d~~dv~~~~~~l----~~~G~~~~~~~~~~~~--g~~~~~~DPdG~~iel~~~~  143 (144)
T 2kjz_A           95 ENDAQVDETFAGW----KASGVAMLQQPAKMEF--GYTFTAADPDSHRLRVYAFA  143 (144)
T ss_dssp             SSHHHHHHHHHHH----HHTTCCCCSCCEEETT--EEEEEECCTTCCEEEEEEEC
T ss_pred             CCHHHHHHHHHHH----HHCCCeEecCceecCC--ceEEEEECCCCCEEEEEecC
Confidence            7   578888888    9999999888877665  48899999999999999864

>1xqa_A Glyoxalase/bleomycin resistance protein; dioxygenase, structural GEN midwest center for structural genomics, MCSG; HET: P6G; 1.80A {Bacillus cereus atcc 14579} SCOP: d.32.1.2

Probab=99.68  E-value=6.2e-16  Score=111.70  Aligned_cols=108  Identities=19%  Similarity=0.261  Sum_probs=80.5

Q ss_pred             cceeeEEEEeCCHHHHHHHHHHhcCCEEEEEeccCCCceeeEEeeccCCCcceEEEeeecCCCCcccCCCCceEEEEEE-
Q 022831           22 RRLLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHLAIAT-  100 (291)
Q Consensus        22 ~~i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~g~~~~~i~~~v-  100 (291)
                      ++|+|+.|.|+|++++.+||+++|||++.....   .  ...++..+.   ...+.+......    ...+..|++|.| 
T Consensus         2 ~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~---~--~~~~~~~~~---~~~l~l~~~~~~----~~~~~~~~~~~v~   69 (113)
T 1xqa_A            2 MGIKHLNLTVADVVAAREFLEKYFGLTCSGTRG---N--AFAVMRDND---GFILTLMKGKEV----QYPKTFHVGFPQE   69 (113)
T ss_dssp             CCCCEEEEEESCHHHHHHHHHHHHCCEEEEEET---T--TEEEEECTT---CCEEEEEECSSC----CCCTTCCEEEECS
T ss_pred             CeeEEEEEEeCCHHHHHHHHHHhCCCEEeccCC---C--cEEEEEcCC---CcEEEEEeCCCC----CCCceeEEEEEcC
Confidence            579999999999999999999999999976431   1  245555432   234555543221    124678999999 


Q ss_pred             --CCHHHHHHHHHHcCCeeeeCCccCCCCceEEEEEECCCCcEEEEE
Q 022831          101 --EDVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFELI  145 (291)
Q Consensus       101 --~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dP~G~~iel~  145 (291)
                        +|+++++++|+++|+++.. |... +  ...++++||+||.|||+
T Consensus        70 ~~~d~~~~~~~l~~~G~~~~~-p~~~-~--~~~~~~~DPdG~~iel~  112 (113)
T 1xqa_A           70 SEEQVDKINQRLKEDGFLVEP-PKHA-H--AYTFYVEAPGGFTIEVM  112 (113)
T ss_dssp             SHHHHHHHHHHHHHTTCCCCC-CEEC----CEEEEEEETTTEEEEEE
T ss_pred             CHHHHHHHHHHHHHCCCEEec-CcCC-C--cEEEEEECCCCcEEEEe
Confidence              8899999999999999754 4433 2  34588999999999986

>3r4q_A Lactoylglutathione lyase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.51A {Agrobacterium tumefaciens}

Probab=99.68  E-value=1.8e-16  Score=122.07  Aligned_cols=119  Identities=13%  Similarity=0.182  Sum_probs=86.6

Q ss_pred             CCCceeeeeeeCCchhhHHHHHHhcCCeeeeeccCcccceeeeeeccCCCCcceEEEEeEecCc--------eeeccCce
Q 022831          151 PEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGV--------TEYTKGNA  222 (291)
Q Consensus       151 ~~~~~hv~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~--------~~~~~~~g  222 (291)
                      ..++.|+.|.|+|++++++||+++|||++......     ...++..+    ...+.+......        .+...+.|
T Consensus         6 i~~l~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~-----~~~~~~~g----~~~~~l~~~~~~~~~~~~~~~~~~~~~g   76 (160)
T 3r4q_A            6 PSAIMETALYADDLDAAEAFYRDVFGLEMVLKLPG-----QLVFFKCG----RQMLLLFDPQESSRADANNPIPRHGAVG   76 (160)
T ss_dssp             CSCEEEEEEECSCHHHHHHHHHHHSCCEEEEEETT-----TEEEEEET----TEEEEEECHHHHTCCCTTCCSCCCEEEE
T ss_pred             cccccEEEEEeCCHHHHHHHHHHhcCCEEEEecCC-----cEEEEeCC----CEEEEEEecCCccCccccCCCCcCCCcc
Confidence            36799999999999999999999999998776432     12233322    133444331111        01112357


Q ss_pred             eeEEEEEe---cChHHHHHHHHHHHHhhCCeeeecccccCCCCceEEEEECCCCCeEEEEechhh
Q 022831          223 YAQVAIST---DDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNEDF  284 (291)
Q Consensus       223 ~~hia~~v---~di~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~~~  284 (291)
                      +.|++|.|   +|++++++++    +++|+++..++.. ++ +.+.+||+|||||.|||++++..
T Consensus        77 ~~hi~f~V~~~~dld~~~~~l----~~~G~~~~~~~~~-~~-g~~~~~~~DPdG~~iel~~~~~~  135 (160)
T 3r4q_A           77 QGHFCFYADDKAEVDEWKTRF----EALEIPVEHYHRW-PN-GSYSVYIRDPAGNSVEVGEGKLW  135 (160)
T ss_dssp             ECEEEEEESSHHHHHHHHHHH----HTTTCCCCEEEEC-TT-SCEEEEEECTTCCEEEEEEGGGG
T ss_pred             eeEEEEEeCCHHHHHHHHHHH----HHCCCEEeccccc-cC-CcEEEEEECCCCCEEEEEeCCCC
Confidence            89999999   8999999999    9999998765543 22 47899999999999999997654

>1xrk_A Bleomycin resistance protein; arm exchange, ligand binding protein, thermostable mutant, antibiotic inhibitor; HET: BLM; 1.50A {Streptoalloteichus hindustanus} SCOP: d.32.1.2 PDB: 2zhp_A* 1byl_A

Probab=99.68  E-value=6.2e-16  Score=113.82  Aligned_cols=109  Identities=14%  Similarity=0.078  Sum_probs=83.2

Q ss_pred             ceeeeeeeCCchhhHHHHHHhcCCeeeeeccCcccceeeeeeccCCCCcceEEEEeEecCceeeccCceeeEEEEEecCh
Q 022831          154 LCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAISTDDV  233 (291)
Q Consensus       154 ~~hv~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~~hia~~v~di  233 (291)
                      ..|+.|.|+|++++.+||+++|||++....  +  .+  ..+..+    ...+.+......    ..++..|++|.|+|+
T Consensus         6 ~~~~~l~v~D~~~a~~FY~~~lG~~~~~~~--~--~~--~~~~~~----~~~l~l~~~~~~----~~~~~~~~~~~v~dv   71 (124)
T 1xrk_A            6 SAVPVLTARDVAEAVEFWTDRLGFSRVFVE--D--DF--AGVVRD----DVTLFISAVQDQ----VVPDNTQAWVWVRGL   71 (124)
T ss_dssp             EEEEEEEESCHHHHHHHHHHTTCCEEEEEC--S--SE--EEEEET----TEEEEEEECSCT----TTGGGCEEEEEEECH
T ss_pred             ceeEEEEcCCHHHHHHHHHHccCceEEecC--C--CE--EEEEEC----CEEEEEEcCCCC----CCCCceEEEEEECCH
Confidence            478999999999999999999999987651  1  12  223322    245555443221    123447999999999


Q ss_pred             HHHHHHHHHHHHhh------CC--eeeecccccCCCCceEEEEECCCCCeEEEEech
Q 022831          234 YKSAEVVNLVTQEL------GG--KITRQPGPIPGLNTKITSFVDPDGWKTVLVDNE  282 (291)
Q Consensus       234 ~~~~~~l~~~~~~~------G~--~~~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~  282 (291)
                      +++++++    +++      |+  ++..+|...+. + +.++++|||||.|||+++.
T Consensus        72 ~~~~~~l----~~~~~~~~~G~~~~~~~~~~~~~~-g-~~~~~~DPdG~~iel~~~~  122 (124)
T 1xrk_A           72 DELYAEW----SEVVSTNFRDASGPAMTEIVEQPW-G-REFALRDPAGNCVHFVAEE  122 (124)
T ss_dssp             HHHHHHH----TTTSBSCTTTCSSCEECCCEEETT-E-EEEEEECTTCCEEEEEEC-
T ss_pred             HHHHHHH----HHhcccccCCccccccCCceecCC-C-CEEEEECCCCCEEEEEEec
Confidence            9999999    999      99  88888887775 3 8999999999999999864

>1r9c_A Glutathione transferase; fosfomycin resistance protein, Mn binding, antibiotic resist transferase; 1.83A {Mesorhizobium loti} SCOP: d.32.1.2

Probab=99.68  E-value=5.3e-16  Score=116.50  Aligned_cols=115  Identities=19%  Similarity=0.234  Sum_probs=83.7

Q ss_pred             CceeeeeeeCCchhhHHHHHHhcCCeeeeeccCcccceee---eeeccCCCCcceEEEEeEecCceeeccCceeeEEEEE
Q 022831          153 PLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCAL---AMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAIS  229 (291)
Q Consensus       153 ~~~hv~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~~hia~~  229 (291)
                      +|.|+.|.|+|++++.+||+++|||++....+  +..+..   .++..+    ...|.+......    ...+..|++|.
T Consensus         4 ~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~--~~~~~~~~~~~~~~g----~~~l~l~~~~~~----~~~~~~h~~~~   73 (139)
T 1r9c_A            4 GLSHMTFIVRDLERMTRILEGVFDAREVYASD--TEQFSLSREKFFLIG----DIWVAIMQGEKL----AERSYNHIAFK   73 (139)
T ss_dssp             EEEEEEEEESCHHHHHHHHHHHHCCEEEEEGG--GSTTCCSCEEEEEET----TEEEEEEECCCC----SSCCSCEEEEE
T ss_pred             eEEEEEEEeCCHHHHHHHHHHhhCCEEeecCC--CccccccceEEEEEC----CEEEEEEeCCCC----CCCCeeEEEEE
Confidence            58999999999999999999999999876532  111110   023322    245666543211    14578999999


Q ss_pred             ec--ChHHHHHHHHHHHHhhCCeeeecccccCCCCceEEEEECCCCCeEEEEech
Q 022831          230 TD--DVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNE  282 (291)
Q Consensus       230 v~--di~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~  282 (291)
                      |+  |++++++++    +++|+++..+|...++ +.+.+||+|||||.|||++..
T Consensus        74 v~~~d~~~~~~~l----~~~G~~~~~~~~~~~~-~~~~~~~~DPdG~~iel~~~~  123 (139)
T 1r9c_A           74 IDDADFDRYAERV----GKLGLDMRPPRPRVEG-EGRSIYFYDDDNHMFELHTGT  123 (139)
T ss_dssp             CCGGGHHHHHHHH----HHHTCCBCCCCC------CCEEEEECTTSCEEEEECCC
T ss_pred             cCHHHHHHHHHHH----HHCCCcccCCcccCCC-CeEEEEEECCCCCEEEEEeCC
Confidence            99  999999999    9999999877665553 468899999999999999954

>2pjs_A AGR_C_3564P, uncharacterized protein ATU1953; glyoxalase/bleomycin resistance protein/dioxygenase superfamily, structural genomics; 1.85A {Agrobacterium tumefaciens str} SCOP: d.32.1.2

Probab=99.68  E-value=2.8e-16  Score=114.56  Aligned_cols=111  Identities=14%  Similarity=0.136  Sum_probs=82.8

Q ss_pred             CceeeeeeeCCchhhHHHHHHhcCCeeeeeccCcccceeeeeeccCCCCcceEEEEeEecCceeeccCceeeEEEEEecC
Q 022831          153 PLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAISTDD  232 (291)
Q Consensus       153 ~~~hv~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~~hia~~v~d  232 (291)
                      .+ |+.|.|+|++++.+||+++|||++....    + . ...+..++ .....+.+....     ...++.+|++|.|+|
T Consensus         8 ~i-~v~l~v~d~~~a~~FY~~~lG~~~~~~~----~-~-~~~~~~~~-~~~~~l~l~~~~-----~~~~~~~~~~~~v~d   74 (119)
T 2pjs_A            8 RV-VANIATPEPARAQAFYGDILGMPVAMDH----G-W-IVTHASPL-EAHAQVSFAREG-----GSGTDVPDLSIEVDN   74 (119)
T ss_dssp             EE-EEEEECSCGGGGHHHHTTTTCCCEEEEC----S-S-EEEEEEEE-EEEEEEEEESSS-----BTTBCCCSEEEEESC
T ss_pred             EE-EEEEEcCCHHHHHHHHHHhcCCEEEecC----C-E-EEEEecCC-CCcEEEEEEcCC-----CCCCceeEEEEEECC
Confidence            46 9999999999999999999999987631    1 1 11222111 112344544321     123467899999999


Q ss_pred             hHHHHHHHHHHHHhhCCeeeecccccCCCCceEEEEECCCCCeEEEEec
Q 022831          233 VYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDN  281 (291)
Q Consensus       233 i~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iel~~~  281 (291)
                      ++++++++    +++|+++..+|...+. +.+.+|++|||||.|||+++
T Consensus        75 ~~~~~~~l----~~~G~~~~~~~~~~~~-g~~~~~~~DPdG~~iel~~~  118 (119)
T 2pjs_A           75 FDEVHARI----LKAGLPIEYGPVTEAW-GVQRLFLRDPFGKLINILSH  118 (119)
T ss_dssp             HHHHHHHH----HHTTCCCSEEEEECTT-SCEEEEEECTTSCEEEEEEC
T ss_pred             HHHHHHHH----HHCCCccccCCccCCC-ccEEEEEECCCCCEEEEEec
Confidence            99999999    9999999888877664 46889999999999999985

>3ct8_A Protein BH2160, putative glyoxalase; NP_243026.1, glyoxalase/bleomycin resis protein/dioxygenase superfamily, structural genomics; HET: UNL; 2.10A {Bacillus halodurans c-125}

Probab=99.68  E-value=1.1e-15  Score=115.80  Aligned_cols=120  Identities=20%  Similarity=0.203  Sum_probs=88.5

Q ss_pred             CCCCCCceeeeeeeCCchhhHHHH---HHhcCCeeeeeccCcccceeeeeeccCCCCcceEEEEeEecC---ceeec-cC
Q 022831          148 GPTPEPLCQVMLRVGDLGRSIKFY---EKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYG---VTEYT-KG  220 (291)
Q Consensus       148 ~~~~~~~~hv~l~v~D~~~~~~Fy---~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~---~~~~~-~~  220 (291)
                      .....++.|+.|.|+|++++++||   +++|||++....+.  +  . .++. +    ...|.|.....   ..+.. ..
T Consensus        15 ~~~~~~i~hv~l~v~Dl~~a~~FY~~~~~~LG~~~~~~~~~--~--~-~~~~-g----~~~l~l~~~~~~~~~~~~~~~~   84 (146)
T 3ct8_A           15 LYFQGMLHHVEINVDHLEESIAFWDWLLGELGYEDYQSWSR--G--K-SYKH-G----KTYLVFVQTEDRFQTPTFHRKR   84 (146)
T ss_dssp             TTTTTSCCEEEEEESCHHHHHHHHHHHHHHTTCEEEEEETT--E--E-EEEE-T----TEEEEEEECCGGGSCSCCCTTS
T ss_pred             cccccceeEEEEEeCCHHHHHHHHHhhhhhCCCEEEEecCC--C--c-eEec-C----CeEEEEEEcCCCcccccccccC
Confidence            345678999999999999999999   99999998765432  1  1 2333 2    24566655332   01111 23


Q ss_pred             ceeeEEEEEec---ChHHHHHHHHHHHHhhCCeeee-cccccCC-CCceEEEEECCCCCeEEEEec
Q 022831          221 NAYAQVAISTD---DVYKSAEVVNLVTQELGGKITR-QPGPIPG-LNTKITSFVDPDGWKTVLVDN  281 (291)
Q Consensus       221 ~g~~hia~~v~---di~~~~~~l~~~~~~~G~~~~~-~p~~~~~-~~~~~~~~~DPdG~~iel~~~  281 (291)
                      +|+.|++|.|+   |++++++++    +++|+++.. +|...+. .+.+.+||+|||||.|||+++
T Consensus        85 ~g~~hi~f~v~~~~dv~~~~~~l----~~~G~~~~~~~p~~~~~g~~~~~~~~~DPdG~~iel~~p  146 (146)
T 3ct8_A           85 TGLNHLAFHAASREKVDELTQKL----KERGDPILYEDRHPFAGGPNHYAVFCEDPNRIKVEIVAP  146 (146)
T ss_dssp             SSCCEEEEECSCHHHHHHHHHHH----HHHTCCBCCTTTTTCTTCTTCCEEEEECTTCCEEEEECC
T ss_pred             CCceEEEEECCCHHHHHHHHHHH----HHcCCccccCCCccccCCCceEEEEEECCCCCEEEEEeC
Confidence            57899999999   899999999    999999887 4654442 246789999999999999874

>2a4x_A Mitomycin-binding protein; ALFA/beta protein, mitomycin C-binding protein, bleomycin A2, antimicrobial protein; HET: BLM; 1.40A {Streptomyces caespitosus} SCOP: d.32.1.2 PDB: 2a4w_A* 1kmz_A 1kll_A*

Probab=99.67  E-value=5.7e-16  Score=116.17  Aligned_cols=120  Identities=18%  Similarity=0.139  Sum_probs=87.9

Q ss_pred             CCceeeeeeeCCchhhHHHHHHhcCCeeeeeccCcccceeeeeeccCCCCcceEEEEeEecC------ceeeccCceeeE
Q 022831          152 EPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYG------VTEYTKGNAYAQ  225 (291)
Q Consensus       152 ~~~~hv~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~------~~~~~~~~g~~h  225 (291)
                      .++.|+.|.|+|++++++||++ |||++....+  ...+..  +..++   ...|.+.....      ......+.+..|
T Consensus         3 ~~l~hv~l~v~D~~~a~~FY~~-LG~~~~~~~~--~~~~~~--~~~~~---~~~l~l~~~~~~~~~~~~~~~~~~~~~~~   74 (138)
T 2a4x_A            3 ARISLFAVVVEDMAKSLEFYRK-LGVEIPAEAD--SAPHTE--AVLDG---GIRLAWDTVETVRSYDPEWQAPTGGHRFA   74 (138)
T ss_dssp             CEEEEEEEEESCHHHHHHHHHT-TTCCCCGGGG--GCSEEE--EECTT---SCEEEEEEHHHHHHHCTTCCCCBSSCSEE
T ss_pred             ceeeEEEEEECCHHHHHHHHHH-cCCcEEecCC--CCceEE--EEcCC---CeEEEEecCccchhhCcccCCCCCCCeEE
Confidence            3589999999999999999998 9999876532  111222  22211   24566654211      001123457899


Q ss_pred             EEEEec---ChHHHHHHHHHHHHhhCCeeeecccccCCCCceEEEEECCCCCeEEEEechhh
Q 022831          226 VAISTD---DVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNEDF  284 (291)
Q Consensus       226 ia~~v~---di~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~~~  284 (291)
                      ++|.|+   |++++++++    +++|+++..+|...+. +.+.+||+|||||.|||++..|+
T Consensus        75 l~f~v~~~~dv~~~~~~l----~~~G~~~~~~~~~~~~-g~~~~~~~DPdG~~iel~~~~~~  131 (138)
T 2a4x_A           75 IAFEFPDTASVDKKYAEL----VDAGYEGHLKPWNAVW-GQRYAIVKDPDGNVVDLFAPLPL  131 (138)
T ss_dssp             EEEECSSHHHHHHHHHHH----HHTTCCEEEEEEEETT-TEEEEEEECTTCCEEEEEEECTT
T ss_pred             EEEEeCCHHHHHHHHHHH----HHCCCceeeCCcccCC-CcEEEEEECCCCCEEEEEeCCcc
Confidence            999999   999999999    9999999888877665 46889999999999999998743

>2rbb_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-2, PROT structure initiative; 1.82A {Burkholderia phytofirmans}

Probab=99.67  E-value=6.5e-16  Score=116.29  Aligned_cols=117  Identities=18%  Similarity=0.145  Sum_probs=82.8

Q ss_pred             ceeeEEEEeCCHHHHHHHHHHhcCCEEEEEeccCCCceeeEEeeccCCCcceEEEeeec-----CCC--CcccCCCCceE
Q 022831           23 RLLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYN-----YGV--TSYDIGTGFGH   95 (291)
Q Consensus        23 ~i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~-----~~~--~~~~~g~~~~~   95 (291)
                      +|.|+.|.|+|++++++||+++|||++......  ..  ...+..+  +.  .+.+...     ...  .....+.+ .|
T Consensus         8 ~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~--~~--~~~~~~~--~~--~l~l~~~~~~~~~~~~~~~~~~~~~-~~   78 (141)
T 2rbb_A            8 DLSYVNIFTRDIVAMSAFYQQVFGFQEIESIRS--PI--FRGLDTG--KS--CIGFNAHEAYELMQLAQFSETSGIK-FL   78 (141)
T ss_dssp             EEEEEEEECSCHHHHHHHHHHHHCCEECGGGCB--TT--EEEEECS--SS--EEEEECTHHHHHTTCGGGCCCBSCC-EE
T ss_pred             cccEEEEEECCHHHHHHHHHHhcCCeeecccCC--Cc--eEEeecC--CE--EEEEcCccccccccccccCCCCCCe-EE
Confidence            899999999999999999999999998643211  12  2334332  12  2332211     010  11112334 49


Q ss_pred             EEEEEC---CHHHHHHHHHHcCCeeeeCCccCCCCceEEEEEECCCCcEEEEEecCC
Q 022831           96 LAIATE---DVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFELIQRGP  149 (291)
Q Consensus        96 i~~~v~---d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dP~G~~iel~~~~~  149 (291)
                      ++|.|+   |+++++++|+++|+++..+|...++|.+ .++|+||+|+.|||++...
T Consensus        79 ~~f~v~~~~dv~~~~~~l~~~G~~~~~~~~~~~~g~~-~~~~~DPdG~~iel~~~~~  134 (141)
T 2rbb_A           79 LNFDVDTKEAVDKLVPVAIAAGATLIKAPYETYYHWY-QAVLLDPERNVFRINNVLE  134 (141)
T ss_dssp             EEEECSCHHHHHHHHHHHHHTTCEEEEEEEECTTSEE-EEEEECTTSCEEEEEEEC-
T ss_pred             EEEEcCCHHHHHHHHHHHHHcCCeEecCccccCCccE-EEEEECCCCCEEEEEEccc
Confidence            999999   5999999999999998887777776644 5899999999999998654

>3fcd_A Lyase, ORF125EGC139; lactoylglutathione lyase, YECM, PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.92A {Uncultured bacterium} SCOP: d.32.1.0

Probab=99.67  E-value=1.7e-15  Score=113.08  Aligned_cols=117  Identities=12%  Similarity=0.144  Sum_probs=81.6

Q ss_pred             ceeeEEEEeCCHHHHHHHHHHhcCCEEEEEeccCCCceeeEEeeccCCCcceEEEeeecCCCCcccCCCCceEEEEEECC
Q 022831           23 RLLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHLAIATED  102 (291)
Q Consensus        23 ~i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~g~~~~~i~~~v~d  102 (291)
                      .-.+..|.|+|++++++||+++|||++.....  .    ..++..+  +  ..+.+...........+.+..|++|.|+|
T Consensus         7 ~~~~~~l~v~D~~~a~~FY~~~LG~~~~~~~~--~----~~~l~~~--~--~~l~l~~~~~~~~~~~~~~~~~l~~~v~d   76 (134)
T 3fcd_A            7 HQITPFLHIPDMQEALTLFCDTLGFELKYRHS--N----YAYLELS--G--CGLRLLEEPARKIIPDGIARVAICIDVSD   76 (134)
T ss_dssp             CEEEEEEEESCHHHHHHHHTTTTCCEEEEEET--T----EEEEEET--T--EEEEEEECCCC---------EEEEEECSC
T ss_pred             hcceeEEEECCHHHHHHHHHhccCcEEEEeCC--C----eEEEEEC--C--EEEEEEeCCCCCcCCCCCceEEEEEEeCC
Confidence            34567899999999999999999999986532  1    4555543  2  34555543322111122244799999999


Q ss_pred             HHHHHHHHHHcC----CeeeeCCccCCCCceEEEEEECCCCcEEEEEecCCC
Q 022831          103 VYKMVENIRAKG----GNVTREPGPLKGMTTHFAFVKDPDGYIFELIQRGPT  150 (291)
Q Consensus       103 ~~~~~~~l~~~G----~~~~~~~~~~~~g~~~~~~~~dP~G~~iel~~~~~~  150 (291)
                      +++++++|+++|    +++..++...++|.+ .++++||+|+.|+|.+....
T Consensus        77 v~~~~~~l~~~g~~~g~~i~~~~~~~~~g~~-~~~~~DPdG~~iel~~~~~~  127 (134)
T 3fcd_A           77 IDSLHTKLSPALENLPADQVEPLKNMPYGQR-EFQVRMPDGDWLNFTAPLAE  127 (134)
T ss_dssp             HHHHHHHHHHHHTTSCGGGEEEEEECTTSEE-EEEEECTTSCEEEEEEECCT
T ss_pred             HHHHHHHHHhcCCccCCccccCCcccCCCcE-EEEEECCCCCEEEEEEcccc
Confidence            999999999655    455666677777655 48899999999999998754

>3bqx_A Glyoxalase-related enzyme; VOC superfamily, PSI-2, STRU genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; 1.40A {Fulvimarina pelagi}

Probab=99.67  E-value=4.6e-16  Score=118.44  Aligned_cols=118  Identities=19%  Similarity=0.230  Sum_probs=88.8

Q ss_pred             CCceeeeeeeCCchhhHHHHHHhcCCeeeeeccCcccceeeeeeccCCCCcceEEEEeEecCce-----eeccCceeeEE
Q 022831          152 EPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVT-----EYTKGNAYAQV  226 (291)
Q Consensus       152 ~~~~hv~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~-----~~~~~~g~~hi  226 (291)
                      .++.|+.|.|+|++++.+||+++|||++....    +.  ..++..+    ...|.|.......     +...+.+..|+
T Consensus         4 ~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~----~~--~~~~~~~----~~~l~l~~~~~~~~~~~~~~~~~~~~~~l   73 (150)
T 3bqx_A            4 QQVAVITLGIGDLEASARFYGEGFGWAPVFRN----PE--IIFYQMN----GFVLATWLVQNLQEDVGVAVTSRPGSMAL   73 (150)
T ss_dssp             CCCCEEEEEESCHHHHHHHHHHTSCCCCSEEC----SS--EEEEECS----SSEEEEEEHHHHHHHHSSCCCSSCCSCEE
T ss_pred             cceEEEEEEcCCHHHHHHHHHHhcCCEeecCC----CC--EEEEEcC----CEEEEEEeccccccccCCCCCCCCCeEEE
Confidence            46899999999999999999999999987653    11  2333322    2456665432110     10114577899


Q ss_pred             EEEe---cChHHHHHHHHHHHHhhCCeeeecccccCCCCceEEEEECCCCCeEEEEechhh
Q 022831          227 AIST---DDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNEDF  284 (291)
Q Consensus       227 a~~v---~di~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~~~  284 (291)
                      +|.|   +|++++++++    +++|+++..+|...+. +.+.+||+|||||.|||++....
T Consensus        74 ~f~v~~~~dv~~~~~~l----~~~G~~~~~~~~~~~~-g~~~~~~~DPdG~~iel~~~~~~  129 (150)
T 3bqx_A           74 AHNVRAETEVAPLMERL----VAAGGQLLRPADAPPH-GGLRGYVADPDGHIWEIAFNPVW  129 (150)
T ss_dssp             EEECSSGGGHHHHHHHH----HHTTCEEEEEEECCTT-SSEEEEEECTTCCEEEEEECTTS
T ss_pred             EEEeCCHHHHHHHHHHH----HHCCCEEecCCcccCC-CCEEEEEECCCCCEEEEEeCCCc
Confidence            9999   8999999999    9999999988877664 45889999999999999987543

>3fcd_A Lyase, ORF125EGC139; lactoylglutathione lyase, YECM, PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.92A {Uncultured bacterium} SCOP: d.32.1.0

Probab=99.66  E-value=7.4e-16  Score=114.99  Aligned_cols=116  Identities=15%  Similarity=0.110  Sum_probs=81.1

Q ss_pred             ceeeeeeeCCchhhHHHHHHhcCCeeeeeccCcccceeeeeeccCCCCcceEEEEeEecCceeeccCceeeEEEEEecCh
Q 022831          154 LCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAISTDDV  233 (291)
Q Consensus       154 ~~hv~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~~hia~~v~di  233 (291)
                      -.+..|.|+|++++.+||+++|||++....+  .  +  .++..+    ...|.+.........+.+.+..|++|.|+|+
T Consensus         8 ~~~~~l~v~D~~~a~~FY~~~LG~~~~~~~~--~--~--~~l~~~----~~~l~l~~~~~~~~~~~~~~~~~l~~~v~dv   77 (134)
T 3fcd_A            8 QITPFLHIPDMQEALTLFCDTLGFELKYRHS--N--Y--AYLELS----GCGLRLLEEPARKIIPDGIARVAICIDVSDI   77 (134)
T ss_dssp             EEEEEEEESCHHHHHHHHTTTTCCEEEEEET--T--E--EEEEET----TEEEEEEECCCC---------EEEEEECSCH
T ss_pred             cceeEEEECCHHHHHHHHHhccCcEEEEeCC--C--e--EEEEEC----CEEEEEEeCCCCCcCCCCCceEEEEEEeCCH
Confidence            4567899999999999999999999876532  1  2  333322    2456665543322112233457999999999


Q ss_pred             HHHHHHHHHHHHhh----CCeeeecccccCCCCceEEEEECCCCCeEEEEechhh
Q 022831          234 YKSAEVVNLVTQEL----GGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNEDF  284 (291)
Q Consensus       234 ~~~~~~l~~~~~~~----G~~~~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~~~  284 (291)
                      +++++++    +++    |+++..+|...++ +.+.++|+|||||.|||+++...
T Consensus        78 ~~~~~~l----~~~g~~~g~~i~~~~~~~~~-g~~~~~~~DPdG~~iel~~~~~~  127 (134)
T 3fcd_A           78 DSLHTKL----SPALENLPADQVEPLKNMPY-GQREFQVRMPDGDWLNFTAPLAE  127 (134)
T ss_dssp             HHHHHHH----HHHHTTSCGGGEEEEEECTT-SEEEEEEECTTSCEEEEEEECCT
T ss_pred             HHHHHHH----HhcCCccCCccccCCcccCC-CcEEEEEECCCCCEEEEEEcccc
Confidence            9999999    644    5567777776665 56899999999999999997543

>2r6u_A Uncharacterized protein; structural genomics, PSI-2, RHA04853, MCSG, protein structur initiative, midwest center for structural genomics; 1.50A {Rhodococcus SP}

Probab=99.66  E-value=1.5e-15  Score=115.42  Aligned_cols=115  Identities=16%  Similarity=0.250  Sum_probs=83.3

Q ss_pred             CCceeeeeeeCCchhhHHHHHHhcCCeeeeeccCcccceeeeeeccCCCCc--------ceEEEEeEecCceeeccCcee
Q 022831          152 EPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQ--------TTVLELAYSYGVTEYTKGNAY  223 (291)
Q Consensus       152 ~~~~hv~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~l~l~~~~~~~~~~~~~g~  223 (291)
                      .++.|+.|.|+|++++++||+++|||++... .  +..+.  ++..++...        .....+...      +..++ 
T Consensus        24 ~~i~hv~l~v~Dl~~a~~FY~~vLG~~~~~~-~--~~~~~--~~~~~~~~~~l~~~~~~~~~~~l~~~------~~~~g-   91 (148)
T 2r6u_A           24 GRIVHFEIPFDDGDRARAFYRDAFGWAIAEI-P--DMDYS--MVTTGPVGESGMPDEPGYINGGMMQR------GEVTT-   91 (148)
T ss_dssp             CCEEEEEEEESSHHHHHHHHHHHHCCEEEEE-T--TTTEE--EEECSCBCTTSSBCSSSCBCEEEEES------SSSCS-
T ss_pred             CceEEEEEEeCCHHHHHHHHHHccCcEEEEC-C--CCCEE--EEEeCCcceeecccCCcccccceeec------CCCCe-
Confidence            5799999999999999999999999998763 1  22232  222222110        011222211      11234 


Q ss_pred             eEEEEEecChHHHHHHHHHHHHhhCCeeeecccccCCCCceEEEEECCCCCeEEEEechh
Q 022831          224 AQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNED  283 (291)
Q Consensus       224 ~hia~~v~di~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~~  283 (291)
                      +|++|.|+|++++++++    +++|+++..+|...++. ++.+||+|||||.|||+++.+
T Consensus        92 ~~l~f~v~dld~~~~~l----~~~G~~~~~~~~~~~~~-g~~~~~~DPdG~~iel~~~~~  146 (148)
T 2r6u_A           92 PVVTVDVESIESALERI----ESLGGKTVTGRTPVGNM-GFAAYFTDSEGNVVGLWETAR  146 (148)
T ss_dssp             CEEEEECSCHHHHHHHH----HHTTCEEEEEEEEETTT-EEEEEEECTTSCEEEEEEECC
T ss_pred             EEEEEEcCCHHHHHHHH----HHcCCeEecCCeecCCC-EEEEEEECCCCCEEEEEecCC
Confidence            49999999999999999    99999999888776632 488999999999999998753

>2qnt_A AGR_C_3434P, uncharacterized protein ATU1872; glyoxalase/bleomycin resistance protein/dioxygenase family R protein, PSI-2, MCSG; HET: MSE EPE; 1.40A {Agrobacterium tumefaciens str}

Probab=99.66  E-value=4.3e-16  Score=117.15  Aligned_cols=118  Identities=15%  Similarity=0.144  Sum_probs=85.0

Q ss_pred             CCccceeeEEEEeCCHHHHHHHHHHhcCCEEEEEeccCCCceeeEEeeccCCCcceEEEe-----ee--c-CCCCcccCC
Q 022831           19 KDKRRLLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVEL-----TY--N-YGVTSYDIG   90 (291)
Q Consensus        19 ~~~~~i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l-----~~--~-~~~~~~~~g   90 (291)
                      +.++++.|+.|.|+|++++++||+++|||++....  +  .  ...+..   +  +.+..     ..  + ........+
T Consensus         4 ~~~~~l~~v~l~v~D~~~a~~FY~~~LG~~~~~~~--~--~--~~~~~~---g--~~l~~~~~~~~~~~~~~~~~~~~~~   72 (141)
T 2qnt_A            4 FQGMRFVNPIPFVRDINRSKSFYRDRLGLKILEDF--G--S--FVLFET---G--FAIHEGRSLEETIWRTSSDAQEAYG   72 (141)
T ss_dssp             CCSCCCCCCCCEESCHHHHHHHHHHTTCCCEEEEC--S--S--EEEETT---S--CEEEEHHHHHHHHHSCCC--CCCSC
T ss_pred             ccccccceEEEEECCHHHHHHHHHHhcCCEEEEEc--C--C--cEEEec---c--ceeccCchhhhhccccCCccccccC
Confidence            45789999999999999999999999999987642  1  1  223321   1  22221     01  0 111112234


Q ss_pred             CCceEEEEEECCHHHHHHHHHHcCCeeeeCCccCCCCceEEEEEECCCCcEEEEEecCC
Q 022831           91 TGFGHLAIATEDVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFELIQRGP  149 (291)
Q Consensus        91 ~~~~~i~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dP~G~~iel~~~~~  149 (291)
                      .+..|++|.|+|+++++++|++ |+++..++...++|.+ .++++||+|+.|+|.+..+
T Consensus        73 ~~~~~~~~~v~dv~~~~~~l~~-G~~~~~~~~~~~~g~~-~~~~~DPdG~~iel~~~~~  129 (141)
T 2qnt_A           73 RRNMLLYFEHADVDAAFQDIAP-HVELIHPLERQAWGQR-VFRFYDPDGHAIEVGESLS  129 (141)
T ss_dssp             CSSCEEEEEESCHHHHHC-CGG-GSCEEEEEEECTTSCE-EEEEECTTCCEEEEEECC-
T ss_pred             CCceEEEEEeCcHHHHHHHHHc-CCccccCCccCCCCCE-EEEEECCCCCEEEEEecch
Confidence            5778999999999999999999 9998887777777644 4889999999999998754

>1qto_A Bleomycin-binding protein; arm-exchange, antibiotic inhibitor; 1.50A {Streptomyces verticillus} SCOP: d.32.1.2 PDB: 1jie_A* 1jif_A

Probab=99.66  E-value=7.8e-16  Score=112.93  Aligned_cols=109  Identities=15%  Similarity=0.079  Sum_probs=82.1

Q ss_pred             ceeeeeeeCCchhhHHHHHHhcCCeeeeeccCcccceeeeeeccCCCCcceEEEEeEecCceeeccCceeeEEEEEecCh
Q 022831          154 LCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAISTDDV  233 (291)
Q Consensus       154 ~~hv~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~~hia~~v~di  233 (291)
                      ..++.|.|+|++++.+||+++|||++...  .+  .+  .++..+    ...+.+......   + .++..|++|.|+|+
T Consensus         6 ~~~~~l~v~D~~~a~~FY~~~LG~~~~~~--~~--~~--~~~~~~----~~~l~l~~~~~~---~-~~~~~~~~~~v~dv   71 (122)
T 1qto_A            6 GAVPVLTAVDVPANVSFWVDTLGFEKDFG--DR--DF--AGVRRG----DIRLHISRTEHQ---I-VADNTSAWIEVTDP   71 (122)
T ss_dssp             CCCCEEEESSHHHHHHHHHHTTCCEEEEE--CS--SE--EEEEET----TEEEEEEECSCH---H-HHTTCEEEEEESCH
T ss_pred             ceeEEEEcCCHHHHHHHHHhccCcEEeeC--CC--CE--EEEEEC----CEEEEEEcCCCC---C-CCCceEEEEEECCH
Confidence            35788999999999999999999998764  11  12  233322    245666542221   1 12347999999999


Q ss_pred             HHHHHHHHHHHHhh------CC--eeeecccccCCCCceEEEEECCCCCeEEEEech
Q 022831          234 YKSAEVVNLVTQEL------GG--KITRQPGPIPGLNTKITSFVDPDGWKTVLVDNE  282 (291)
Q Consensus       234 ~~~~~~l~~~~~~~------G~--~~~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~  282 (291)
                      +++++++    +++      |+  ++..+|...++ + +.++++|||||.|||++++
T Consensus        72 d~~~~~l----~~~~~~~~~G~~~~~~~~~~~~~~-g-~~~~~~DPdG~~iel~~~~  122 (122)
T 1qto_A           72 DALHEEW----ARAVSTDYADTSGPAMTPVGESPA-G-REFAVRDPAGNCVHFTAGE  122 (122)
T ss_dssp             HHHHHHH----TTTSCSCTTCTTSCEECCCEEETT-E-EEEEEECTTSCEEEEEECC
T ss_pred             HHHHHHH----HhhccccccCccccccCCCcCCCC-C-cEEEEECCCCCEEEEecCC
Confidence            9999999    999      99  88888877665 3 8899999999999999864

>1ecs_A Bleomycin resistance protein; arm-exchange, antibiotic inhibitor; HET: PG4; 1.70A {Klebsiella pneumoniae} SCOP: d.32.1.2 PDB: 1ewj_A* 1niq_B* 1mh6_A

Probab=99.66  E-value=2.3e-15  Score=111.05  Aligned_cols=113  Identities=20%  Similarity=0.262  Sum_probs=83.8

Q ss_pred             ceeeeeeeCCchhhHHHHHHhcCCeeeeeccCcccceeeeeeccCCCCcceEEEEeEecCceeeccCceeeEEEEEecCh
Q 022831          154 LCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAISTDDV  233 (291)
Q Consensus       154 ~~hv~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~~hia~~v~di  233 (291)
                      ..++.|.|+|++++.+||++ |||++...  .  +.+  .++..+    ...+.+....+.   ....+..|++|.|+|+
T Consensus         4 ~~~~~l~v~D~~~a~~FY~~-LG~~~~~~--~--~~~--~~~~~~----~~~l~l~~~~~~---~~~~~~~~~~~~v~dv   69 (126)
T 1ecs_A            4 QATPNLPSRDFDSTAAFYER-LGFGIVFR--D--AGW--MILQRG----DLMLEFFAHPGL---DPLASWFSCCLRLDDL   69 (126)
T ss_dssp             EEEEEEEESCHHHHHHHHHT-TTCEEEEE--C--SSE--EEEEET----TEEEEEEECTTC---CGGGCCCEEEEEESCH
T ss_pred             cEEEEEEeCCHHHHHHHHHH-CCCEEEec--C--CCE--EEEEeC----CEEEEEEeCCCC---CCCCcceEEEEEECCH
Confidence            46789999999999999998 99998765  1  122  233322    245666543221   1135678999999999


Q ss_pred             HHHHHHHHHHHHhhCCee-------eecccccCCCCceEEEEECCCCCeEEEEechhhh
Q 022831          234 YKSAEVVNLVTQELGGKI-------TRQPGPIPGLNTKITSFVDPDGWKTVLVDNEDFL  285 (291)
Q Consensus       234 ~~~~~~l~~~~~~~G~~~-------~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~~~~  285 (291)
                      +++++++    +++|+++       ..+|...++ +.+.++++|||||.|||+++....
T Consensus        70 ~~~~~~l----~~~G~~~~~~~~~~~~~~~~~~~-g~~~~~~~DPdG~~iel~~~~~~~  123 (126)
T 1ecs_A           70 AEFYRQC----KSVGIQETSSGYPRIHAPELQGW-GGTMAALVDPDGTLLRLIQNELLA  123 (126)
T ss_dssp             HHHHHHH----HHTTCCBCSSSSSEEEEEEECTT-SSEEEEEECTTSCEEEEEECCC--
T ss_pred             HHHHHHH----HHCCCccccccCccccCCcccCc-ccEEEEEECCCCCEEEEecchhhc
Confidence            9999999    9999994       677766664 458899999999999999987643

>1qto_A Bleomycin-binding protein; arm-exchange, antibiotic inhibitor; 1.50A {Streptomyces verticillus} SCOP: d.32.1.2 PDB: 1jie_A* 1jif_A

Probab=99.66  E-value=1.3e-15  Score=111.67  Aligned_cols=113  Identities=13%  Similarity=0.049  Sum_probs=83.5

Q ss_pred             CCccceeeEEEEeCCHHHHHHHHHHhcCCEEEEEeccCCCceeeEEeeccCCCcceEEEeeecCCCCcccCCCCceEEEE
Q 022831           19 KDKRRLLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHLAI   98 (291)
Q Consensus        19 ~~~~~i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~g~~~~~i~~   98 (291)
                      ||...-.++.|.|+|++++++||+++|||++...   .+ .  ..++..+  +  ..+.+...... +  . .+..|++|
T Consensus         1 m~~~~~~~~~l~v~D~~~a~~FY~~~LG~~~~~~---~~-~--~~~~~~~--~--~~l~l~~~~~~-~--~-~~~~~~~~   66 (122)
T 1qto_A            1 MVKFLGAVPVLTAVDVPANVSFWVDTLGFEKDFG---DR-D--FAGVRRG--D--IRLHISRTEHQ-I--V-ADNTSAWI   66 (122)
T ss_dssp             CCCCCCCCCEEEESSHHHHHHHHHHTTCCEEEEE---CS-S--EEEEEET--T--EEEEEEECSCH-H--H-HTTCEEEE
T ss_pred             CCcccceeEEEEcCCHHHHHHHHHhccCcEEeeC---CC-C--EEEEEEC--C--EEEEEEcCCCC-C--C-CCceEEEE
Confidence            3334456899999999999999999999999764   11 1  4445443  2  33444432211 1  1 13469999


Q ss_pred             EECCHHHHHHHHHHc------CC--eeeeCCccCCCCceEEEEEECCCCcEEEEEec
Q 022831           99 ATEDVYKMVENIRAK------GG--NVTREPGPLKGMTTHFAFVKDPDGYIFELIQR  147 (291)
Q Consensus        99 ~v~d~~~~~~~l~~~------G~--~~~~~~~~~~~g~~~~~~~~dP~G~~iel~~~  147 (291)
                      .|+|+++++++|+++      |+  ++..++...++| + .++++||+||.|+|.+.
T Consensus        67 ~v~dvd~~~~~l~~~~~~~~~G~~~~~~~~~~~~~~g-~-~~~~~DPdG~~iel~~~  121 (122)
T 1qto_A           67 EVTDPDALHEEWARAVSTDYADTSGPAMTPVGESPAG-R-EFAVRDPAGNCVHFTAG  121 (122)
T ss_dssp             EESCHHHHHHHHTTTSCSCTTCTTSCEECCCEEETTE-E-EEEEECTTSCEEEEEEC
T ss_pred             EECCHHHHHHHHHhhccccccCccccccCCCcCCCCC-c-EEEEECCCCCEEEEecC
Confidence            999999999999999      99  887777777776 4 47899999999999875

>1nki_A Probable fosfomycin resistance protein; potassium binding loop, manganese binding, transferase; 0.95A {Pseudomonas aeruginosa} SCOP: d.32.1.2 PDB: 1lqo_A 1lqk_A 1lqp_A 1nnr_A

Probab=99.66  E-value=1.9e-15  Score=112.81  Aligned_cols=111  Identities=25%  Similarity=0.266  Sum_probs=84.0

Q ss_pred             CceeeeeeeCCchhhHHHHHHhcCCeeeeeccCcccceeeeeeccCCCCcceEEEEeEecCceeeccCceeeEEEEEec-
Q 022831          153 PLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAISTD-  231 (291)
Q Consensus       153 ~~~hv~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~~hia~~v~-  231 (291)
                      ++.|+.|.|+|++++.+||+++|||++....+  +.    .++..+    ...+.+......  .....+..|++|.|+ 
T Consensus         4 ~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~--~~----~~~~~~----~~~l~l~~~~~~--~~~~~~~~h~~~~v~~   71 (135)
T 1nki_A            4 GLNHLTLAVADLPASIAFYRDLLGFRLEARWD--QG----AYLELG----SLWLCLSREPQY--GGPAADYTHYAFGIAA   71 (135)
T ss_dssp             EEEEEEEEESCHHHHHHHHHHTTCCEEEEEET--TE----EEEEET----TEEEEEEECTTC--CCCCSSSCEEEEEECH
T ss_pred             eEeEEEEEeCCHHHHHHHHHHhcCCEEEEcCC--Cc----eEEecC----CEEEEEEeCCCC--CCCCCCcceEEEEccH
Confidence            58999999999999999999999999876532  11    223322    244666543211  122457889999997 


Q ss_pred             -ChHHHHHHHHHHHHhhCCeeeecccccCCCCceEEEEECCCCCeEEEEechh
Q 022831          232 -DVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNED  283 (291)
Q Consensus       232 -di~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~~  283 (291)
                       |++++++++    +++|+++..+|..    +++.+|++|||||.|||++...
T Consensus        72 ~d~~~~~~~l----~~~G~~~~~~~~~----~~~~~~~~DPdG~~iel~~~~~  116 (135)
T 1nki_A           72 ADFARFAAQL----RAHGVREWKQNRS----EGDSFYFLDPDGHRLEAHVGDL  116 (135)
T ss_dssp             HHHHHHHHHH----HHTTCCEEECCCS----SSCEEEEECTTCCEEEEESCCH
T ss_pred             HHHHHHHHHH----HHCCCceecCCCC----CeEEEEEECCCCCEEEEEECCc
Confidence             999999999    9999999876642    3578999999999999998654

>3rri_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-biology, midwest center for structu genomics; 1.50A {Alicyclobacillus acidocaldarius subsp}

Probab=99.65  E-value=2.7e-15  Score=111.86  Aligned_cols=120  Identities=15%  Similarity=0.081  Sum_probs=84.0

Q ss_pred             CCCCceeeeeeeCCchhhHHHHHHhcCCeeeeeccCcccceeeeeeccCCCCcceEEEEeEecCceeeccCceeeEEEEE
Q 022831          150 TPEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAIS  229 (291)
Q Consensus       150 ~~~~~~hv~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~~hia~~  229 (291)
                      .+.+|+|+.|.|+|++++++||+++|||++....+    .+  ..+...+    ..+.+....... .+...+..|++|.
T Consensus         6 ~~~~i~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~~----~~--~~~~~~g----~~~~l~~~~~~~-~~~~~~~~h~~~~   74 (135)
T 3rri_A            6 NPNDVFHLAIPARDLDEAYDFYVTKLGCKLARRYP----DR--ITLDFFG----DQLVCHLSDRWD-REVSMYPRHFGIT   74 (135)
T ss_dssp             CTTSEEEEEEEESCHHHHHHHHTTTTCCEEEEEET----TE--EEEEETT----EEEEEEECSCSC-SSCCSSSCEEEEE
T ss_pred             CCCccceEEEEcCCHHHHHHHHHHhcCCEeeccCC----Cc--EEEEEeC----CEEEEEEcCccc-ccCCCCCCeEEEE
Confidence            35679999999999999999999999999865422    11  2222111    123333321110 0123456899998


Q ss_pred             ec---ChHHHHHHHHHHHHhhCCeeeeccccc---CCCCceEEEEECCCCCeEEEEechhh
Q 022831          230 TD---DVYKSAEVVNLVTQELGGKITRQPGPI---PGLNTKITSFVDPDGWKTVLVDNEDF  284 (291)
Q Consensus       230 v~---di~~~~~~l~~~~~~~G~~~~~~p~~~---~~~~~~~~~~~DPdG~~iel~~~~~~  284 (291)
                      +.   |++++++++    +++|+++..+|...   ..++.+.+||+|||||.|||++..+.
T Consensus        75 ~~~~~d~~~~~~~l----~~~G~~~~~~p~~~~~~~~~~~~~~~~~DPdGn~iel~~~~~~  131 (135)
T 3rri_A           75 FRDKKHFDNLYKLA----KQRGIPFYHDLSRRFEGLIEEHETFFLIDPSNNLLEFKYYFDD  131 (135)
T ss_dssp             CSSHHHHHHHHHHH----HHTTCCEEEEEEEESTTSTTCEEEEEEECTTCCEEEEEEESSG
T ss_pred             EcChHhHHHHHHHH----HHcCCceecCcccccCCCCCceEEEEEECCCCCEEEEEEECCh
Confidence            85   599999999    99999998877653   12235789999999999999997654

>1ecs_A Bleomycin resistance protein; arm-exchange, antibiotic inhibitor; HET: PG4; 1.70A {Klebsiella pneumoniae} SCOP: d.32.1.2 PDB: 1ewj_A* 1niq_B* 1mh6_A

Probab=99.65  E-value=6.9e-15  Score=108.43  Aligned_cols=111  Identities=19%  Similarity=0.260  Sum_probs=83.0

Q ss_pred             eeeEEEEeCCHHHHHHHHHHhcCCEEEEEeccCCCceeeEEeeccCCCcceEEEeeecCCCCcccCCCCceEEEEEECCH
Q 022831           24 LLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHLAIATEDV  103 (291)
Q Consensus        24 i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~g~~~~~i~~~v~d~  103 (291)
                      ..++.|.|+|++++++||++ |||++...    ++.  .+++..+  +  ..+.+.......   ...+..|++|.|+|+
T Consensus         4 ~~~~~l~v~D~~~a~~FY~~-LG~~~~~~----~~~--~~~~~~~--~--~~l~l~~~~~~~---~~~~~~~~~~~v~dv   69 (126)
T 1ecs_A            4 QATPNLPSRDFDSTAAFYER-LGFGIVFR----DAG--WMILQRG--D--LMLEFFAHPGLD---PLASWFSCCLRLDDL   69 (126)
T ss_dssp             EEEEEEEESCHHHHHHHHHT-TTCEEEEE----CSS--EEEEEET--T--EEEEEEECTTCC---GGGCCCEEEEEESCH
T ss_pred             cEEEEEEeCCHHHHHHHHHH-CCCEEEec----CCC--EEEEEeC--C--EEEEEEeCCCCC---CCCcceEEEEEECCH
Confidence            46899999999999999998 99999764    112  4445543  2  234554332211   123667999999999


Q ss_pred             HHHHHHHHHcCCee-------eeCCccCCCCceEEEEEECCCCcEEEEEecCC
Q 022831          104 YKMVENIRAKGGNV-------TREPGPLKGMTTHFAFVKDPDGYIFELIQRGP  149 (291)
Q Consensus       104 ~~~~~~l~~~G~~~-------~~~~~~~~~g~~~~~~~~dP~G~~iel~~~~~  149 (291)
                      ++++++|+++|+++       ..+|...++|.+ .++++||+|+.|+|.+...
T Consensus        70 ~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~g~~-~~~~~DPdG~~iel~~~~~  121 (126)
T 1ecs_A           70 AEFYRQCKSVGIQETSSGYPRIHAPELQGWGGT-MAALVDPDGTLLRLIQNEL  121 (126)
T ss_dssp             HHHHHHHHHTTCCBCSSSSSEEEEEEECTTSSE-EEEEECTTSCEEEEEECCC
T ss_pred             HHHHHHHHHCCCccccccCccccCCcccCcccE-EEEEECCCCCEEEEecchh
Confidence            99999999999994       666676777655 4789999999999998754

>1xqa_A Glyoxalase/bleomycin resistance protein; dioxygenase, structural GEN midwest center for structural genomics, MCSG; HET: P6G; 1.80A {Bacillus cereus atcc 14579} SCOP: d.32.1.2

Probab=99.65  E-value=1.1e-15  Score=110.48  Aligned_cols=108  Identities=19%  Similarity=0.191  Sum_probs=80.2

Q ss_pred             CCceeeeeeeCCchhhHHHHHHhcCCeeeeeccCcccceeeeeeccCCCCcceEEEEeEecCceeeccCceeeEEEEEe-
Q 022831          152 EPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAIST-  230 (291)
Q Consensus       152 ~~~~hv~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~~hia~~v-  230 (291)
                      .++.|+.|.|+|++++.+||+++|||++....   +.  ...++..++   ...|.+......    ..++.+|++|.| 
T Consensus         2 ~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~---~~--~~~~~~~~~---~~~l~l~~~~~~----~~~~~~~~~~~v~   69 (113)
T 1xqa_A            2 MGIKHLNLTVADVVAAREFLEKYFGLTCSGTR---GN--AFAVMRDND---GFILTLMKGKEV----QYPKTFHVGFPQE   69 (113)
T ss_dssp             CCCCEEEEEESCHHHHHHHHHHHHCCEEEEEE---TT--TEEEEECTT---CCEEEEEECSSC----CCCTTCCEEEECS
T ss_pred             CeeEEEEEEeCCHHHHHHHHHHhCCCEEeccC---CC--cEEEEEcCC---CcEEEEEeCCCC----CCCceeEEEEEcC
Confidence            36899999999999999999999999987542   11  223343222   245666543221    135689999999 


Q ss_pred             --cChHHHHHHHHHHHHhhCCeeeecccccCCCCceEEEEECCCCCeEEEE
Q 022831          231 --DDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLV  279 (291)
Q Consensus       231 --~di~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iel~  279 (291)
                        +|++++++++    +++|+++. .|.. .+  .+.+|++|||||.|||+
T Consensus        70 ~~~d~~~~~~~l----~~~G~~~~-~p~~-~~--~~~~~~~DPdG~~iel~  112 (113)
T 1xqa_A           70 SEEQVDKINQRL----KEDGFLVE-PPKH-AH--AYTFYVEAPGGFTIEVM  112 (113)
T ss_dssp             SHHHHHHHHHHH----HHTTCCCC-CCEE-C---CEEEEEEETTTEEEEEE
T ss_pred             CHHHHHHHHHHH----HHCCCEEe-cCcC-CC--cEEEEEECCCCcEEEEe
Confidence              8899999999    99999975 4543 33  58899999999999997

>3zi1_A Glyoxalase domain-containing protein 4; isomerase; 1.90A {Homo sapiens}

Probab=99.65  E-value=7.4e-16  Score=132.57  Aligned_cols=118  Identities=26%  Similarity=0.470  Sum_probs=93.2

Q ss_pred             CCceeeeeeeCCchhhHHHHHHhcCCeeeeeccCc-----------ccceeeeeeccCCCCcceEEEEeEecCceeeccC
Q 022831          152 EPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSP-----------ELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKG  220 (291)
Q Consensus       152 ~~~~hv~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~  220 (291)
                      .++.|+.|.|+|++++.+||+++|||++..+...+           ++.+...++..+.......++|....+...+..+
T Consensus        26 ~~i~Hv~l~V~Dle~s~~FY~~vLGl~~~~~~~~~~~~~a~~~g~~~~~~~~~~l~~~~~~~~~~leL~~~~~~~~~~~~  105 (330)
T 3zi1_A           26 RRALHFVFKVGNRFQTARFYRDVLGMKVLRHEEFEEGCKAACNGPYDGKWSKTMVGFGPEDDHFVAELTYNYGVGDYKLG  105 (330)
T ss_dssp             CEEEEEEEECSCHHHHHHHHHHTSCCEEEEEEEEC---------CCCSCEEEEEEESSCTTTCCEEEEEEETTCCCCCBC
T ss_pred             ceeeEEEEEeCCHHHHHHHHHHhcCCeEEEEeecchhhhhhccCCcCCceEEEEEecCCCCCccEEEEeccCCCCccccC
Confidence            57999999999999999999999999987665433           3445667776655555678888776655445556


Q ss_pred             ceeeEEEEEecChHHHHHHHHHHHHhhCCeeeecccccCCCCceEEEEECCCCCeEEEEechh
Q 022831          221 NAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNED  283 (291)
Q Consensus       221 ~g~~hia~~v~di~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~~  283 (291)
                      +|+.|++|.|+|+   .+++    +++|+++...|.       +++||+||||+.|||++...
T Consensus       106 ~g~~hiaf~V~d~---~~~l----~~~G~~~~~~~~-------~~~~~~DPdG~~iel~~~~~  154 (330)
T 3zi1_A          106 NDFMGITLASSQA---VSNA----RKLEWPLTEVAE-------GVFETEAPGGYKFYLQNRSL  154 (330)
T ss_dssp             SSEEEEEEECHHH---HHHH----HHHTCCCEEEET-------TEEEEECTTSCEEEEESSCC
T ss_pred             CCeeEEEEECchH---HHHH----HHcCCceeccCC-------ceEEEECCCCCEEEEEecCC
Confidence            7999999999986   5677    889999876552       37899999999999999753

>1npb_A Fosfomycin-resistance protein; manganese binding, potassium binding loop, transferase; 2.50A {Serratia marcescens} SCOP: d.32.1.2

Probab=99.65  E-value=2.2e-15  Score=113.31  Aligned_cols=114  Identities=24%  Similarity=0.301  Sum_probs=84.9

Q ss_pred             CCceeeeeeeCCchhhHHHHHHhcCCeeeeeccCcccceeeeeeccCCCCcceEEEEeEecCcee-eccCceeeEEEEEe
Q 022831          152 EPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTE-YTKGNAYAQVAIST  230 (291)
Q Consensus       152 ~~~~hv~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~-~~~~~g~~hia~~v  230 (291)
                      .++.|+.|.|+|++++.+||+++|||++....+  +.    .++..+    ...+.+.......+ .....+.+|++|.|
T Consensus         3 ~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~--~~----~~~~~~----~~~l~l~~~~~~~~~~~~~~~~~hi~~~v   72 (141)
T 1npb_A            3 QSLNHLTLAVSDLQKSVTFWHELLGLTLHARWN--TG----AYLTCG----DLWVCLSYDEARQYVPPQESDYTHYAFTV   72 (141)
T ss_dssp             CEEEEEEEEESCHHHHHHHHHTTSCCEEEEEET--TE----EEEEET----TEEEEEEECTTCCCCCGGGSCSCEEEEEC
T ss_pred             ceEEEEEEEeCCHHHHHHHHHhccCCEEEeecC--Cc----EEEEEC----CEEEEEEECCCCCCCCCCCCCceEEEEEe
Confidence            358999999999999999999999999876542  11    223322    23456654322111 12345789999999


Q ss_pred             c--ChHHHHHHHHHHHHhhCCeeeecccccCCCCceEEEEECCCCCeEEEEechh
Q 022831          231 D--DVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNED  283 (291)
Q Consensus       231 ~--di~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~~  283 (291)
                      +  |++++++++    +++|+++..+|.  .  +++.+|++|||||.|||++...
T Consensus        73 ~~~d~~~~~~~l----~~~G~~~~~~~~--~--~~~~~~~~DPdG~~iel~~~~~  119 (141)
T 1npb_A           73 AEEDFEPLSQRL----EQAGVTIWKQNK--S--EGASFYFLDPDGHKLELHVGSL  119 (141)
T ss_dssp             CHHHHHHHHHHH----HHTTCCEEECCC--S--SSEEEEEECTTCCEEEEEECCH
T ss_pred             CHHHHHHHHHHH----HHCCCeEeccCC--C--ceeEEEEECCCCCEEEEEECch
Confidence            6  999999999    999999887654  2  3688999999999999999754

>4gym_A Glyoxalase/bleomycin resistance protein/dioxygena; PSI-biology, midwest center for structural genomics, MCSG, oxidoreductase; HET: MSE; 1.56A {Conexibacter woesei}

Probab=99.65  E-value=1.3e-15  Score=115.84  Aligned_cols=118  Identities=23%  Similarity=0.226  Sum_probs=78.3

Q ss_pred             CCCCceeeeeeeCCchhhHHHHHHhcCCeeeeeccCcccceeeeeeccCCCCcceEEEEeEec------Cc-eeeccCce
Q 022831          150 TPEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSY------GV-TEYTKGNA  222 (291)
Q Consensus       150 ~~~~~~hv~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~------~~-~~~~~~~g  222 (291)
                      ...++.||+|.|+|++++++||++ +|+........+.  ........     ...+.+....      .. .....+.+
T Consensus         6 ~~~rl~~V~L~V~Dl~~s~~FY~~-lg~~~~~~~~~~~--~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~   77 (149)
T 4gym_A            6 SQSRLTFVNLPVADVAASQAFFGT-LGFEFNPKFTDES--CACMVVSE-----QAFVMLIDRARFADFTSKPIADATATT   77 (149)
T ss_dssp             -CCCCEEEEEEESCHHHHHHHHHH-TTCEECGGGCBTT--EEEEEEET-----TEEEEEEEHHHHGGGCSSCBCCTTTCB
T ss_pred             CCccEEEEEEEeCCHHHHHHHHHH-hCCCcceeecCCc--eeEEeecC-----cceEeeeccccccccccccCCCCCCCC
Confidence            357899999999999999999988 4555443332222  11122221     1222222110      00 01122345


Q ss_pred             eeEEEEEec---ChHHHHHHHHHHHHhhCCeeeecccccCCCCceEEEEECCCCCeEEEEec
Q 022831          223 YAQVAISTD---DVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDN  281 (291)
Q Consensus       223 ~~hia~~v~---di~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iel~~~  281 (291)
                      ..|++|.|+   +++++++++    .++|+++..+|...++  ++.+||+|||||+|||+..
T Consensus        78 ~~~~a~~v~~~~~vd~~~~~~----~~~g~~~~~~p~~~~~--~~~~~f~DPDGn~iEi~~~  133 (149)
T 4gym_A           78 EAIVCVSAIDRDDVDRFADTA----LGAGGTVARDPMDYGF--MYGRSFHDLDGHLWEVMWM  133 (149)
T ss_dssp             SCEEEEECSSHHHHHHHHHHH----HHTTCEECSCCEECSS--EEEEEEECTTCCEEEEEEE
T ss_pred             eeEEEEEeccHHHHHHHHHHH----HhcCceeeccccccCC--EEEEEEEcCCCCEEEEEEE
Confidence            679999996   477778888    9999999999987665  6889999999999999863

>2rbb_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-2, PROT structure initiative; 1.82A {Burkholderia phytofirmans}

Probab=99.64  E-value=2.2e-15  Score=113.32  Aligned_cols=117  Identities=16%  Similarity=0.144  Sum_probs=83.2

Q ss_pred             CceeeeeeeCCchhhHHHHHHhcCCeeeeeccCcccceeeeeeccCCCCcceEEEEeEe-----cCc-ee-eccCceeeE
Q 022831          153 PLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYS-----YGV-TE-YTKGNAYAQ  225 (291)
Q Consensus       153 ~~~hv~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~-----~~~-~~-~~~~~g~~h  225 (291)
                      ++.|+.|.|+|++++++||+++|||++......  ..+  .++..+    ...+.+...     ... .+ ...+++ .|
T Consensus         8 ~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~--~~~--~~~~~~----~~~l~l~~~~~~~~~~~~~~~~~~~~~-~~   78 (141)
T 2rbb_A            8 DLSYVNIFTRDIVAMSAFYQQVFGFQEIESIRS--PIF--RGLDTG----KSCIGFNAHEAYELMQLAQFSETSGIK-FL   78 (141)
T ss_dssp             EEEEEEEECSCHHHHHHHHHHHHCCEECGGGCB--TTE--EEEECS----SSEEEEECTHHHHHTTCGGGCCCBSCC-EE
T ss_pred             cccEEEEEECCHHHHHHHHHHhcCCeeecccCC--Cce--EEeecC----CEEEEEcCccccccccccccCCCCCCe-EE
Confidence            689999999999999999999999998654321  112  222222    123333221     000 00 112345 59


Q ss_pred             EEEEec---ChHHHHHHHHHHHHhhCCeeeecccccCCCCceEEEEECCCCCeEEEEechh
Q 022831          226 VAISTD---DVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNED  283 (291)
Q Consensus       226 ia~~v~---di~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~~  283 (291)
                      ++|.|+   |++++++++    +++|+++..+|...++ +.+.+||+|||||.|||++..+
T Consensus        79 ~~f~v~~~~dv~~~~~~l----~~~G~~~~~~~~~~~~-g~~~~~~~DPdG~~iel~~~~~  134 (141)
T 2rbb_A           79 LNFDVDTKEAVDKLVPVA----IAAGATLIKAPYETYY-HWYQAVLLDPERNVFRINNVLE  134 (141)
T ss_dssp             EEEECSCHHHHHHHHHHH----HHTTCEEEEEEEECTT-SEEEEEEECTTSCEEEEEEEC-
T ss_pred             EEEEcCCHHHHHHHHHHH----HHcCCeEecCccccCC-ccEEEEEECCCCCEEEEEEccc
Confidence            999999   599999999    9999999888876664 4788999999999999998654

>3lm4_A Catechol 2,3-dioxygenase; NYSGXRC, PSI-II, protein structure initiative, 2hydroxyl 6 OXO 6 phenyl hexa 2-4 dienoic acid, peroxide; HET: HPX; 1.80A {Rhodococcus jostii}

Probab=99.64  E-value=5.2e-15  Score=127.82  Aligned_cols=124  Identities=15%  Similarity=0.125  Sum_probs=94.1

Q ss_pred             cCCccceeeEEEEeCCHHHHHHHHHHhcCCEEEEEeccCCCceeeEEeeccCCCcceEEEeeecCCCCcccCCCCceEEE
Q 022831           18 KKDKRRLLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHLA   97 (291)
Q Consensus        18 ~~~~~~i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~g~~~~~i~   97 (291)
                      .+.+.+|+|+.|.|+|++++.+||+++|||++..... +++.....++..+...  ..+.+.....    ....+++|++
T Consensus       148 g~~~~~l~Hv~l~v~D~~~a~~FY~~vLG~~~~~~~~-~~g~~~~~~l~~~~~~--~~l~~~~~~~----~~~~~~~Hia  220 (339)
T 3lm4_A          148 GIPVKRIDHLNLMSSDVTAVKDSFERHLGFRTTERVV-DGNVEIGAWMSSNLLG--HEVACMRDMT----GGHGKLHHLA  220 (339)
T ss_dssp             SSCCCEEEEEEEEESCHHHHHHHHHHHHCCEEEEEEE-ETTEEEEEEEESSSSS--CSEEEEECTT----SCCSEEEEEE
T ss_pred             CCCcceeeeEEEEcCCHHHHHHHHHHhCCCeEEEEEe-cCCcEEEEEEEeCCCc--eEEEEeccCC----CCCCceeEEE
Confidence            3578999999999999999999999999999987654 3343455667654432  2344443211    1233689999


Q ss_pred             EEECC---HHHHHHHHHHcCCeeeeCCccCCCCceEEEEEECCCCcEEEEEecC
Q 022831           98 IATED---VYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFELIQRG  148 (291)
Q Consensus        98 ~~v~d---~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dP~G~~iel~~~~  148 (291)
                      |.|+|   +++++++|+++|+++...|.+...+...++|++||+|+.||++...
T Consensus       221 f~v~d~~~v~~~~~~l~~~G~~i~~~p~~~~~~~~~~~y~~DPdG~~iEl~~~~  274 (339)
T 3lm4_A          221 FFYGTGQHNIDAVEMFRDYDIQIEAGPDKHGITQSQFLYVFEPGGNRIELFGEA  274 (339)
T ss_dssp             EECCCHHHHHHHHHHHHHTTCEEEEEEEEETGGGEEEEEEECTTSCEEEEECCC
T ss_pred             EEeCCHHHHHHHHHHHHHCCCeEEeCCcccccCCceEEEEEcCCCCEEEEEEcC
Confidence            99999   8888999999999988777665555556799999999999998654

>4gym_A Glyoxalase/bleomycin resistance protein/dioxygena; PSI-biology, midwest center for structural genomics, MCSG, oxidoreductase; HET: MSE; 1.56A {Conexibacter woesei}

Probab=99.63  E-value=3.5e-15  Score=113.34  Aligned_cols=119  Identities=21%  Similarity=0.272  Sum_probs=78.6

Q ss_pred             CccceeeEEEEeCCHHHHHHHHHHhcCCEEEEEeccCCCceeeEEeeccCCCcceEEEeeec-----C-C-CCcccCCCC
Q 022831           20 DKRRLLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYN-----Y-G-VTSYDIGTG   92 (291)
Q Consensus        20 ~~~~i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~-----~-~-~~~~~~g~~   92 (291)
                      +..+|.||+|.|+|++++++||++ ||+........  +.  ..++.... ...  +.+...     . . ......+.+
T Consensus         6 ~~~rl~~V~L~V~Dl~~s~~FY~~-lg~~~~~~~~~--~~--~~~~~~~~-~~~--~~~~~~~~~~~~~~~~~~~~~~~~   77 (149)
T 4gym_A            6 SQSRLTFVNLPVADVAASQAFFGT-LGFEFNPKFTD--ES--CACMVVSE-QAF--VMLIDRARFADFTSKPIADATATT   77 (149)
T ss_dssp             -CCCCEEEEEEESCHHHHHHHHHH-TTCEECGGGCB--TT--EEEEEEET-TEE--EEEEEHHHHGGGCSSCBCCTTTCB
T ss_pred             CCccEEEEEEEeCCHHHHHHHHHH-hCCCcceeecC--Cc--eeEEeecC-cce--EeeeccccccccccccCCCCCCCC
Confidence            457899999999999999999998 56655432221  11  22222211 111  111110     0 1 111122335


Q ss_pred             ceEEEEEEC---CHHHHHHHHHHcCCeeeeCCccCCCCceEEEEEECCCCcEEEEEecC
Q 022831           93 FGHLAIATE---DVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFELIQRG  148 (291)
Q Consensus        93 ~~~i~~~v~---d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dP~G~~iel~~~~  148 (291)
                      ..|++|.|+   +++++++++.++|+++..+|...+++  ..+||+|||||+|||+...
T Consensus        78 ~~~~a~~v~~~~~vd~~~~~~~~~g~~~~~~p~~~~~~--~~~~f~DPDGn~iEi~~~~  134 (149)
T 4gym_A           78 EAIVCVSAIDRDDVDRFADTALGAGGTVARDPMDYGFM--YGRSFHDLDGHLWEVMWMS  134 (149)
T ss_dssp             SCEEEEECSSHHHHHHHHHHHHHTTCEECSCCEECSSE--EEEEEECTTCCEEEEEEEC
T ss_pred             eeEEEEEeccHHHHHHHHHHHHhcCceeeccccccCCE--EEEEEEcCCCCEEEEEEEC
Confidence            569999996   47889999999999999888876654  4589999999999998754

>3hpy_A Catechol 2,3-dioxygenase; repeated motifs, aromatic hydrocarbons catabolism, iron, oxidoreductase; 1.94A {Pseudomonas SP} PDB: 3hpv_A 3hq0_A*

Probab=99.63  E-value=2e-14  Score=122.58  Aligned_cols=123  Identities=16%  Similarity=0.151  Sum_probs=91.3

Q ss_pred             cCCccceeeEEEEeCCHHHHHHHHHHhcCCEEEEEeccCC-CceeeEEeeccCCCcceEEEeeecCCCCcccCCCCceEE
Q 022831           18 KKDKRRLLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPE-EKYSNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHL   96 (291)
Q Consensus        18 ~~~~~~i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~g~~~~~i   96 (291)
                      .+.+.+|+||.|.|+|++++.+||+++|||++......+. +.....++..+.....  +.+....      .+.+..|+
T Consensus       146 ~~~~~~i~Hv~l~v~D~~~~~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~------~~~~~~Hi  217 (309)
T 3hpy_A          146 GIAPIQLDHCLLYGPNIAEVQKIFTEVLGFYLVERVLSPDGDSDMGIWLSCSHKVHD--IAFVEYP------EKGKLHHC  217 (309)
T ss_dssp             SSCCSEEEEEEEEESCHHHHHHHHHHTSCCEEEEEEECSSSCSEEEEEEESSSSSCS--EEEEECS------STTEEEEE
T ss_pred             CcccceeeeEEEEeCCHHHHHHHHHHhcCCEEEEEEecCCCCceEEEEEecCCCcee--EEEecCC------CCCceeEE
Confidence            3678999999999999999999999999999977654333 3344566665433222  2232211      12358999


Q ss_pred             EEEECCHHH---HHHHHHHcCCeeeeCCccCCCCceEEEEEECCCCcEEEEEecC
Q 022831           97 AIATEDVYK---MVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFELIQRG  148 (291)
Q Consensus        97 ~~~v~d~~~---~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dP~G~~iel~~~~  148 (291)
                      +|.|+|+++   ++++|+++|+++...|.....+...++|++||+||.||+....
T Consensus       218 af~v~d~~~v~~~~~~l~~~G~~~~~~p~~~~~~~~~~~y~~DPdG~~iE~~~~g  272 (309)
T 3hpy_A          218 SFLLESWEQVLRAGDIMSMNEVNVDIGPTRHGVTRGCTIYAWDPSGNRFETFMGG  272 (309)
T ss_dssp             EEECSSHHHHHHHHHHHHHTTCCBSSCSEECSSSSEEEEEEECTTSCEEEEEEEC
T ss_pred             EEECCCHHHHHHHHHHHHHCCCEEEeCCccCCCCccEEEEEECCCCCEEEEEeCC
Confidence            999998664   6789999999987777665555556789999999999998774

>3zw5_A Glyoxalase domain-containing protein 5; lyase; 1.60A {Homo sapiens}

Probab=99.63  E-value=2.5e-15  Score=113.94  Aligned_cols=116  Identities=16%  Similarity=0.210  Sum_probs=82.1

Q ss_pred             CCCceeeeeeeCCchhhHHHHHHhcCCeeeeeccCcccceeeeeeccCCCCcceEEEEeEecCc---eeeccCceeeEEE
Q 022831          151 PEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGV---TEYTKGNAYAQVA  227 (291)
Q Consensus       151 ~~~~~hv~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~---~~~~~~~g~~hia  227 (291)
                      ..+|.|+.|.|+|++++++||+++|||++....+  .  ..  .+..++    ..+.+......   ......+|..|++
T Consensus        25 i~~i~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~--~--~~--~l~~g~----~~l~l~~~~~~~~~~~~~~~~g~~~~~   94 (147)
T 3zw5_A           25 IRRLDHIVMTVKSIKDTTMFYSKILGMEVMTFKE--D--RK--ALCFGD----QKFNLHEVGKEFEPKAAHPVPGSLDIC   94 (147)
T ss_dssp             CEEEEEEEEEESCHHHHHHHHHHHHCCEEEEETT--T--EE--EEEETT----EEEEEEETTSCCSSCCSSCCTTCCEEE
T ss_pred             cccccEEEEEeCCHHHHHHHHHHhcCCEEEecCC--C--ce--EEEECC----cEEEEEEcCCCcCcccCCCCCCCceEE
Confidence            3569999999999999999999999999875422  1  11  222221    34444332111   1112244778899


Q ss_pred             EEec-ChHHHHHHHHHHHHhhCCeeeecccccCCC--CceEEEEECCCCCeEEEEe
Q 022831          228 ISTD-DVYKSAEVVNLVTQELGGKITRQPGPIPGL--NTKITSFVDPDGWKTVLVD  280 (291)
Q Consensus       228 ~~v~-di~~~~~~l~~~~~~~G~~~~~~p~~~~~~--~~~~~~~~DPdG~~iel~~  280 (291)
                      |.+. |++++++++    +++|+++..+|...++.  ..+.+||+|||||+|||++
T Consensus        95 ~~~~~dl~~~~~~l----~~~G~~~~~~p~~~~~~~g~~~~~~~~DPdGn~iEl~~  146 (147)
T 3zw5_A           95 LITEVPLEEMIQHL----KACDVPIEEGPVPRTGAKGPIMSIYFRDPDRNLIEVSN  146 (147)
T ss_dssp             EECSSCHHHHHHHH----HHTTCCCCEEEEEEEETTEEEEEEEEECTTCCEEEEEE
T ss_pred             EEeccCHHHHHHHH----HHcCCceeeCcccccCCCCceEEEEEECCCCCEEEEec
Confidence            9886 999999999    99999988776543322  2357899999999999987

>1mpy_A Catechol 2,3-dioxygenase; extradiol dioxygenase, non heme iron dioxygenase, metapyrocatechase, oxidoreductase; 2.80A {Pseudomonas putida} SCOP: d.32.1.3 d.32.1.3

Probab=99.62  E-value=8.4e-15  Score=124.71  Aligned_cols=145  Identities=19%  Similarity=0.245  Sum_probs=96.8

Q ss_pred             cCCccceeeEEEEeCCHHHHHHHHHHhcCCEEEEEeccCCCceeeEEeeccCCCcceEEEeeecCCCCcccCCCC-ceEE
Q 022831           18 KKDKRRLLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTSYDIGTG-FGHL   96 (291)
Q Consensus        18 ~~~~~~i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~g~~-~~~i   96 (291)
                      .+++.+|+|+.|.|+|++++++||+++|||++........+.....++..+.....  +.+...       .+.+ ..|+
T Consensus       145 ~~~~~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~l~~~~~~~~--~~~~~~-------~~~g~~~hi  215 (307)
T 1mpy_A          145 GMAAVRFDHALMYGDELPATYDLFTKVLGFYLAEQVLDENGTRVAQFLSLSTKAHD--VAFIHH-------PEKGRLHHV  215 (307)
T ss_dssp             TTCCCEEEEEEEEESCHHHHHHHHHHTTCCEEEEEEECTTCCEEEEEEESSSBSCS--EEEEEC-------SSSSEEEEE
T ss_pred             CCCcCceeeEEEEcCCHHHHHHHHHHHcCCeeEeeeecCCCcEEEEEEEcCCCcee--EEEecC-------CCCCcceEE
Confidence            46789999999999999999999999999999765432222112234554332222  333221       1224 7899


Q ss_pred             EEEEC---CHHHHHHHHHHcCCeeeeCCccCCCCceEEEEEECCCCcEEEEEecCCC--CCCceeeeeeeCCchhhHHHH
Q 022831           97 AIATE---DVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFELIQRGPT--PEPLCQVMLRVGDLGRSIKFY  171 (291)
Q Consensus        97 ~~~v~---d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dP~G~~iel~~~~~~--~~~~~hv~l~v~D~~~~~~Fy  171 (291)
                      +|.|+   |+++++++|+++|+++..+|...+.+....+|++||+|+.|||++....  |.. ..+.....+..+...||
T Consensus       216 ~f~v~d~~dv~~~~~~l~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~~~~~~~~-~~~~w~~~~~~~~~~~~  294 (307)
T 1mpy_A          216 SFHLETWEDLLRAADLISMTDTSIDIGPTRHGLTHGKTIYFFDPSGNRNEVFCGGDYNYPDH-KPVTWTTDQLGKAIFYH  294 (307)
T ss_dssp             EEECSCHHHHHHHHHHHHHHTCCEEEEEEECSSTTCEEEEEECTTSCEEEEEECCCBCCTTS-CCEEEEGGGHHHHHCTT
T ss_pred             EEEcCCHHHHHHHHHHHHHCCCceeeCCccCCCCCceEEEEECCCCcEEEEEecccccCCCC-CCeEeecccccccceec
Confidence            99999   5677789999999998766666543333468999999999999987532  211 11233445555555555


Q ss_pred             H
Q 022831          172 E  172 (291)
Q Consensus       172 ~  172 (291)
                      .
T Consensus       295 ~  295 (307)
T 1mpy_A          295 D  295 (307)
T ss_dssp             T
T ss_pred             C
Confidence            4

>2qnt_A AGR_C_3434P, uncharacterized protein ATU1872; glyoxalase/bleomycin resistance protein/dioxygenase family R protein, PSI-2, MCSG; HET: MSE EPE; 1.40A {Agrobacterium tumefaciens str}

Probab=99.61  E-value=1.5e-15  Score=114.19  Aligned_cols=115  Identities=16%  Similarity=0.202  Sum_probs=82.5

Q ss_pred             CCceeeeeeeCCchhhHHHHHHhcCCeeeeeccCcccceeeeeeccCCCCcceEEEE-----eEe---cCceeeccCcee
Q 022831          152 EPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLEL-----AYS---YGVTEYTKGNAY  223 (291)
Q Consensus       152 ~~~~hv~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l-----~~~---~~~~~~~~~~g~  223 (291)
                      .++.|+.|.|+|++++.+||+++|||++....+  .  + . .+..+     ..+..     ...   ....+...+.+.
T Consensus         7 ~~l~~v~l~v~D~~~a~~FY~~~LG~~~~~~~~--~--~-~-~~~~g-----~~l~~~~~~~~~~~~~~~~~~~~~~~~~   75 (141)
T 2qnt_A            7 MRFVNPIPFVRDINRSKSFYRDRLGLKILEDFG--S--F-V-LFETG-----FAIHEGRSLEETIWRTSSDAQEAYGRRN   75 (141)
T ss_dssp             CCCCCCCCEESCHHHHHHHHHHTTCCCEEEECS--S--E-E-EETTS-----CEEEEHHHHHHHHHSCCC--CCCSCCSS
T ss_pred             cccceEEEEECCHHHHHHHHHHhcCCEEEEEcC--C--c-E-EEecc-----ceeccCchhhhhccccCCccccccCCCc
Confidence            468999999999999999999999999875431  1  1 1 22211     22221     000   011111234578


Q ss_pred             eEEEEEecChHHHHHHHHHHHHhhCCeeeecccccCCCCceEEEEECCCCCeEEEEechh
Q 022831          224 AQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNED  283 (291)
Q Consensus       224 ~hia~~v~di~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~~  283 (291)
                      .|++|.|+|++++++++    ++ |+++..+|...++ +.+.+|++|||||.|||+++.+
T Consensus        76 ~~~~~~v~dv~~~~~~l----~~-G~~~~~~~~~~~~-g~~~~~~~DPdG~~iel~~~~~  129 (141)
T 2qnt_A           76 MLLYFEHADVDAAFQDI----AP-HVELIHPLERQAW-GQRVFRFYDPDGHAIEVGESLS  129 (141)
T ss_dssp             CEEEEEESCHHHHHC-C----GG-GSCEEEEEEECTT-SCEEEEEECTTCCEEEEEECC-
T ss_pred             eEEEEEeCcHHHHHHHH----Hc-CCccccCCccCCC-CCEEEEEECCCCCEEEEEecch
Confidence            99999999999999999    99 9999888887764 4688999999999999999754

>2rk9_A Glyoxalase/bleomycin resistance protein/dioxygena; NYSGXRC, structural genomics, protein structur initiative II; 1.60A {Vibrio splendidus}

Probab=99.61  E-value=1.6e-14  Score=109.22  Aligned_cols=115  Identities=15%  Similarity=0.234  Sum_probs=78.7

Q ss_pred             eeEEEEeCCHHHHHHHHHHhcCCEEEEEeccCCCceeeEEeeccCCCcceEEEeeecC---C-----CCcccCCCCceEE
Q 022831           25 LHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNY---G-----VTSYDIGTGFGHL   96 (291)
Q Consensus        25 ~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~---~-----~~~~~~g~~~~~i   96 (291)
                      ..+.|.|+|++++++||+++|||++......+  .  ..++..+  +.  .+.+....   .     ......+.++. +
T Consensus         7 ~~~~l~v~Dl~~s~~FY~~~LG~~~~~~~~~~--~--~~~l~~g--~~--~l~l~~~~~~~~~~~~~~~~~~~~~g~~-~   77 (145)
T 2rk9_A            7 VVPELYCFDINVSQSFFVDVLGFEVKYERPDE--E--FVYLTLD--GV--DVMLEGIAGKSRKWLSGDLEFPLGSGVN-F   77 (145)
T ss_dssp             EEEEEEESSHHHHHHHHHHTTCCEEEEEEGGG--T--EEEEEET--TE--EEEEEEC-----------CCSSTTTTEE-E
T ss_pred             ceEEEEECCHHHHHHHHHhccCCEEEeecCCC--C--EEEEEcC--Ce--EEEEEeccCCCcccccCccccCCCCceE-E
Confidence            56899999999999999999999997533221  2  3455543  22  34443321   1     01112234554 9


Q ss_pred             EEEECCHHHHHHHHHH-cCCeeeeCCcc-------CCCCceEEEEEECCCCcEEEEEecCC
Q 022831           97 AIATEDVYKMVENIRA-KGGNVTREPGP-------LKGMTTHFAFVKDPDGYIFELIQRGP  149 (291)
Q Consensus        97 ~~~v~d~~~~~~~l~~-~G~~~~~~~~~-------~~~g~~~~~~~~dP~G~~iel~~~~~  149 (291)
                      +|.|+|+++++++|++ +|+++..++..       ..++.+ .++|+||||+.|||++...
T Consensus        78 ~~~v~dvd~~~~~l~~~~G~~~~~~~~~~~~g~~~~~~~~~-~~~~~DPdG~~iel~~~~~  137 (145)
T 2rk9_A           78 QWDVIDIEPLYQRVNESAADSIYLALESKSYQCGDSIATQK-QFMVQTPDGYLFRFCQDIH  137 (145)
T ss_dssp             EEECSCHHHHHHHHHHHHGGGEEEEEEEEEC-----CCEEE-EEEEECTTCCEEEEEEC--
T ss_pred             EEEECCHHHHHHHHHhhCCCeEecCccccccccCCCCCcce-EEEEECCCCCEEEEEEcCC
Confidence            9999999999999999 99998876654       233333 4789999999999998764

>3bt3_A Glyoxalase-related enzyme, ARAC type; VOC superfamily, PSI-2, NYSGXRC, structural genomics, prote structure initiative; 2.50A {Clostridium phytofermentans}

Probab=99.61  E-value=1.1e-14  Score=110.51  Aligned_cols=119  Identities=17%  Similarity=0.151  Sum_probs=80.4

Q ss_pred             CCccceeeEEEEeCCHHHHHHHHHHhcCCEEEEEeccCCCceeeEEeeccCCCcceEEEeeecCCCCcccC--C------
Q 022831           19 KDKRRLLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTSYDI--G------   90 (291)
Q Consensus        19 ~~~~~i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~--g------   90 (291)
                      .+++++.|+.|.|+|++++.+||+++|||++.......+ .+  .++  +.     .+.+...........  +      
T Consensus        17 ~~~~~~~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~-~~--~~~--g~-----~l~l~~~~~~~~~~~~~~~~~~~g   86 (148)
T 3bt3_A           17 GYVVRENGPVYFTKDMDKTVKWFEEILGWSGDIVARDDE-GF--GDY--GC-----VFDYPSEVAVAHLTPFRGFHLFKG   86 (148)
T ss_dssp             SCEEEECCCEEEESCHHHHHHHHHHTTCCEEEEEEECTT-SC--EEE--EE-----EESSCTTTTSCC--CCCSEEEEES
T ss_pred             CceEEeeeEEEEECCHHHHHHHHHhccCCEEEeeeecCC-Cc--cEE--cc-----EEEEeccCCCcccccccccceeec
Confidence            357899999999999999999999999999964211111 11  222  11     143311111000000  1      


Q ss_pred             -CCceEEEE-EECCHHHHHHHHHHcCCeeeeCCccCCCCceEEEEEECCCCcEEEEEecC
Q 022831           91 -TGFGHLAI-ATEDVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFELIQRG  148 (291)
Q Consensus        91 -~~~~~i~~-~v~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dP~G~~iel~~~~  148 (291)
                       ....+.+| .|+|+++++++|.++|+++..+|...++|.+ .++++||+|+.|+|.+..
T Consensus        87 ~~~~~~~~~~~v~dvd~~~~~l~~~G~~~~~~~~~~~~g~~-~~~~~DPdG~~iel~~~~  145 (148)
T 3bt3_A           87 EPIKGVAGFMMIEGIDALHKYVKENGWDQISDIYTQPWGAR-ECSITTTDGCILRFFESI  145 (148)
T ss_dssp             CCCSSEEEEEEEECHHHHHHHHHHTTCCCBCCCEEETTTEE-EEEEECTTSCEEEEEEEC
T ss_pred             cCCCccEEEEEcCCHHHHHHHHHHcCCccccCcccCCCccE-EEEEECCCCCEEEEeeec
Confidence             01122255 9999999999999999998888877777644 488999999999999864

>1f1u_A Homoprotocatechuate 2,3-dioxygenase; extradiol, manganese, biodegradation, aromatic, oxidoreductase; 1.50A {Arthrobacter globiformis} SCOP: d.32.1.3 d.32.1.3 PDB: 1f1r_A 1f1v_A* 1f1x_A

Probab=99.61  E-value=2.2e-14  Score=123.06  Aligned_cols=121  Identities=21%  Similarity=0.248  Sum_probs=91.0

Q ss_pred             cCCccceeeEEEEeCCHHHHHHHHHHhcCCEEEEEeccCCCceeeEEeeccCCCcceEEEeeecCCCCcccCCCCceEEE
Q 022831           18 KKDKRRLLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHLA   97 (291)
Q Consensus        18 ~~~~~~i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~g~~~~~i~   97 (291)
                      .+.+.+|+|+.|.|+|++++.+|| ++|||++......+++.....|+..+....  .+.+...       .+++++|++
T Consensus       147 ~~~~~~l~Hv~l~v~D~~~a~~FY-~~LGf~~~~~~~~~~g~~~~~f~~~~~~~~--~~~~~~~-------~~~~~~Hia  216 (323)
T 1f1u_A          147 AGELVRLDHFNQVTPDVPRGRAYL-EDLGFRVSEDIKDSDGVTYAAWMHRKQTVH--DTALTGG-------NGPRMHHVA  216 (323)
T ss_dssp             TTCCCEEEEEEEEESCHHHHHHHH-HHTTCEEEEEEECTTCCEEEEEEESSSSSC--SEEEEES-------SBSEEEEEE
T ss_pred             CCCCceeeeEEEecCCHHHHHHHH-HhCCCeEEEEEEcCCCcEEEEEEEcCCCcc--cEEEeCC-------CCCCceEEE
Confidence            357899999999999999999999 999999987655444444456665543222  2333321       123789999


Q ss_pred             EEECCHHH---HHHHHHHcCC--eeeeCCccCCCCceEEEEEECCCCcEEEEEecC
Q 022831           98 IATEDVYK---MVENIRAKGG--NVTREPGPLKGMTTHFAFVKDPDGYIFELIQRG  148 (291)
Q Consensus        98 ~~v~d~~~---~~~~l~~~G~--~~~~~~~~~~~g~~~~~~~~dP~G~~iel~~~~  148 (291)
                      |.|+|+++   ++++|+++|+  ++...+.....+...++|++||+|+.||+....
T Consensus       217 f~v~d~d~v~~~~~~l~~~G~~~~i~~~p~~~~~~~~~~~y~~DPdG~~iE~~~~~  272 (323)
T 1f1u_A          217 FATHEKHNIIQICDKMGALRISDRIERGPGRHGVSNAFYLYILDPDGHRIEIYTQD  272 (323)
T ss_dssp             EECSSHHHHHHHHHHHHHTTCGGGEEEEEEECSTTCCEEEEEECTTCCEEEEEECC
T ss_pred             EECCCHHHHHHHHHHHHHCCCccccccCCCccCCCCcEEEEEECCCCCEEEEEeCC
Confidence            99999988   9999999999  887655555444455689999999999998754

>2rk9_A Glyoxalase/bleomycin resistance protein/dioxygena; NYSGXRC, structural genomics, protein structur initiative II; 1.60A {Vibrio splendidus}

Probab=99.60  E-value=1.1e-14  Score=110.08  Aligned_cols=117  Identities=15%  Similarity=0.076  Sum_probs=79.5

Q ss_pred             eeeeeeeCCchhhHHHHHHhcCCeeeeeccCcccceeeeeeccCCCCcceEEEEeEec--Cc------eeeccCceeeEE
Q 022831          155 CQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSY--GV------TEYTKGNAYAQV  226 (291)
Q Consensus       155 ~hv~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~--~~------~~~~~~~g~~hi  226 (291)
                      ..+.|.|+|++++.+||+++|||++.....  ...+  .++..+    ...+.|....  +.      ...+.+.|+. +
T Consensus         7 ~~~~l~v~Dl~~s~~FY~~~LG~~~~~~~~--~~~~--~~l~~g----~~~l~l~~~~~~~~~~~~~~~~~~~~~g~~-~   77 (145)
T 2rk9_A            7 VVPELYCFDINVSQSFFVDVLGFEVKYERP--DEEF--VYLTLD----GVDVMLEGIAGKSRKWLSGDLEFPLGSGVN-F   77 (145)
T ss_dssp             EEEEEEESSHHHHHHHHHHTTCCEEEEEEG--GGTE--EEEEET----TEEEEEEEC-----------CCSSTTTTEE-E
T ss_pred             ceEEEEECCHHHHHHHHHhccCCEEEeecC--CCCE--EEEEcC----CeEEEEEeccCCCcccccCccccCCCCceE-E
Confidence            457899999999999999999999875322  1223  233322    2344554321  00      0112234555 9


Q ss_pred             EEEecChHHHHHHHHHHHHh-hCCeeeeccccc------CCCCceEEEEECCCCCeEEEEechhh
Q 022831          227 AISTDDVYKSAEVVNLVTQE-LGGKITRQPGPI------PGLNTKITSFVDPDGWKTVLVDNEDF  284 (291)
Q Consensus       227 a~~v~di~~~~~~l~~~~~~-~G~~~~~~p~~~------~~~~~~~~~~~DPdG~~iel~~~~~~  284 (291)
                      +|.|+|++++++++    ++ +|+++..+|...      ...+.+.++|+|||||.|||++....
T Consensus        78 ~~~v~dvd~~~~~l----~~~~G~~~~~~~~~~~~g~~~~~~~~~~~~~~DPdG~~iel~~~~~~  138 (145)
T 2rk9_A           78 QWDVIDIEPLYQRV----NESAADSIYLALESKSYQCGDSIATQKQFMVQTPDGYLFRFCQDIHE  138 (145)
T ss_dssp             EEECSCHHHHHHHH----HHHHGGGEEEEEEEEEC-----CCEEEEEEEECTTCCEEEEEEC---
T ss_pred             EEEECCHHHHHHHH----HhhCCCeEecCccccccccCCCCCcceEEEEECCCCCEEEEEEcCCC
Confidence            99999999999999    99 999998877642      22245789999999999999997654

>2zyq_A Probable biphenyl-2,3-DIOL 1,2-dioxygenase BPHC; extradiol, DHSA, TB, catechol, cholesterol, steroid, aromatic hydrocarbons catabolism; HET: TAR; 2.00A {Mycobacterium tuberculosis} PDB: 2zi8_A*

Probab=99.59  E-value=3.3e-14  Score=120.61  Aligned_cols=122  Identities=16%  Similarity=0.272  Sum_probs=87.9

Q ss_pred             CCccceeeEEEEeCCHHHHHHHHHHhcCCEEEEEeccC--------CC-ceeeEEeeccCCCcceEEEeeecCCCCcccC
Q 022831           19 KDKRRLLHAVYRVGDLDRTIKYYTECFGMELLRKRDVP--------EE-KYSNAFLGFGPEQSYFVVELTYNYGVTSYDI   89 (291)
Q Consensus        19 ~~~~~i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~--------~~-~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~   89 (291)
                      ..+.+|+|+.|.|+|++++++||+++|||++......+        ++ .....++..+....  .+.+....      .
T Consensus       138 ~~~~~l~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~--~~~~~~~~------~  209 (300)
T 2zyq_A          138 TGEQGMGHVVLSTRDDAEALHFYRDVLGFRLRDSMRLPPQMVGRPADGPPAWLRFFGCNPRHH--SLAFLPMP------T  209 (300)
T ss_dssp             CGGGCSCEEEEECSCHHHHHHHHHTTTCCEEEEEEEECGGGGTCCTTSCCEEEEEEESSSBSC--SEEEESSC------C
T ss_pred             cCCCccCeEEEEeCCHHHHHHHHHHhcCCEEeeeecccccccccCCCCCceEEEEEEECCCcc--EEEEecCC------C
Confidence            45789999999999999999999999999997543222        12 22345555433222  23333211      1


Q ss_pred             CCCceEEEEEECCHHH---HHHHHHHcCCeeeeCCccCCCCceEEEEEECCCCcEEEEEecC
Q 022831           90 GTGFGHLAIATEDVYK---MVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFELIQRG  148 (291)
Q Consensus        90 g~~~~~i~~~v~d~~~---~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dP~G~~iel~~~~  148 (291)
                      ..+..|++|.|+|+++   ++++|+++|+++...|...+.+...++|++||+||.|||+...
T Consensus       210 ~~g~~h~af~v~d~~~v~~~~~~l~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iEl~~~~  271 (300)
T 2zyq_A          210 SSGIVHLMVEVEQADDVGLCLDRALRRKVPMSATLGRHVNDLMLSFYMKTPGGFDIEFGCEG  271 (300)
T ss_dssp             SSSEEEEEEEBSSHHHHHHHHHHHHHTTCCEEEEEEEESSSCCEEEEEECTTSSEEEEEECC
T ss_pred             CCCceEEEEEeCCHHHHHHHHHHHHHCCCceeecccccCCCCeEEEEEECCCCCEEEEEeCC
Confidence            3478899999999655   5999999999988776655544455689999999999999754

>3b59_A Glyoxalase/bleomycin resistance protein/dioxygena; 11004Z, NYSGXRC, PSI-2, structural genomics, Pro structure initiative; 2.53A {Novosphingobium aromaticivorans}

Probab=99.58  E-value=4.4e-14  Score=120.49  Aligned_cols=115  Identities=17%  Similarity=0.301  Sum_probs=89.2

Q ss_pred             CCccceeeEEEEeCCHHHHHHHHHHhcCCEEEEEeccCCCceeeEEeeccCCCcceEEEeeecCCCCcccCCCCceEEEE
Q 022831           19 KDKRRLLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHLAI   98 (291)
Q Consensus        19 ~~~~~i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~g~~~~~i~~   98 (291)
                      .++.+|+|+.|.|+|++++.+||+++|||++.....  +   ...|+..+...  ..+.+...       . .++.|++|
T Consensus       137 ~~~~~l~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~--~---~~~fl~~~~~~--~~l~l~~~-------~-~g~~hi~f  201 (310)
T 3b59_A          137 GVPVKISHIVLHSPNHQDMVKFFTDVLGFKVSDWLG--D---FMCFLRCNSAH--HRIAILPG-------P-PCLNHVAY  201 (310)
T ss_dssp             CCCCEEEEEEEEETTHHHHHHHHHHTSCCEEEEEET--T---TEEEEESSSBS--CSEEEEES-------S-SEEEEEEE
T ss_pred             CcCcEeceEEEecCCHHHHHHHHHhCCCCEEEEeeC--C---eEEEEecCCCc--ceEEEECC-------C-CceEEEEE
Confidence            578999999999999999999999999999976532  1   25566654322  23334332       1 47899999


Q ss_pred             EECCHHHH---HHHHHHcCCeeeeCCccCCCCceEEEEEECCCCcEEEEEecC
Q 022831           99 ATEDVYKM---VENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFELIQRG  148 (291)
Q Consensus        99 ~v~d~~~~---~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dP~G~~iel~~~~  148 (291)
                      .|+|++++   +++|+++|+++...+.+...+...++|++||+|+.||+.+..
T Consensus       202 ~v~d~d~~~~~~~~l~~~G~~~~~~p~~~~~~~~~~~y~~DPdG~~iE~~~~~  254 (310)
T 3b59_A          202 DMLSVDDMMRGAHRLKVKGIDIGWGPGRHTAGNNTFSYFVTPGGFVTEYTSEL  254 (310)
T ss_dssp             ECSSHHHHHHHHHHHHHTTCCCSEEEEECSTTCCEEEEEECTTSCEEEEEECC
T ss_pred             EcCCHHHHHHHHHHHHHcCCceeecCccccCCCcEEEEEECCCCCEEEEEeCc
Confidence            99997776   999999999988777665555555689999999999999875

>3oaj_A Putative ring-cleaving dioxygenase MHQO; structural genomics, protein structure initiative, PSI-biolo unknown function; 1.40A {Bacillus subtilis subsp}

Probab=99.58  E-value=3e-14  Score=122.67  Aligned_cols=125  Identities=14%  Similarity=0.186  Sum_probs=88.6

Q ss_pred             CCCceeeeeeeCCchhhHHHHHHhcCCeeeeeccCcc-cceeeeeeccCCCCcceEEEEeEecCcee-eccCceeeEEEE
Q 022831          151 PEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPE-LKCALAMLGYAEEDQTTVLELAYSYGVTE-YTKGNAYAQVAI  228 (291)
Q Consensus       151 ~~~~~hv~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~l~~~~~~~~-~~~~~g~~hia~  228 (291)
                      ..+|+||++.|+|++++.+||+++|||++.....+.+ ......+++.........|++........ ....+++.|++|
T Consensus         6 i~~i~Hv~l~v~Dl~~s~~FY~~vLGl~~v~~~~~~~~~~~~~l~~~~~~g~~g~~l~l~~~~~~~~~~~~~~~~~hiaf   85 (335)
T 3oaj_A            6 TMGIHHITAIVGHPQENTDFYAGVLGLRLVKQTVNFDDPGTYHLYFGNEGGKPGTIITFFPWAGARQGVIGDGQVGVTSY   85 (335)
T ss_dssp             CCSEEEEEEEESCHHHHHHHHTTTTCCEEEEEEECSSCTTSEEEEEESTTCCTTSEEEEEECTTCCBCBCCBSEEEEEEE
T ss_pred             CCcccEEEEEeCCHHHHHHHHHHhcCCEEEeeecCCCCCceEEEEEecCCCCCCcEEEEEECCCCCCCCCCCCceEEEEE
Confidence            3579999999999999999999999999887643221 11222233322111235666655332211 122357899999


Q ss_pred             Eec--ChHHHHHHHHHHHHhhCCeeeecccccCCCCceEEEEECCCCCeEEEEechh
Q 022831          229 STD--DVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNED  283 (291)
Q Consensus       229 ~v~--di~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~~  283 (291)
                      .|+  |+++++++|    +++|+++..  ...  .+.+.+||+|||||.|||++..+
T Consensus        86 ~V~~~dl~~~~~rL----~~~Gv~~~~--~~~--~g~~~~~f~DPdGn~iEl~~~~~  134 (335)
T 3oaj_A           86 VVPKGAMAFWEKRL----EKFNVPYTK--IER--FGEQYVEFDDPHGLHLEIVEREE  134 (335)
T ss_dssp             EECTTCHHHHHHHH----HHTTCCCEE--EEE--TTEEEEEEECTTSCEEEEEECSC
T ss_pred             EecHHHHHHHHHHH----HhCcceeee--ecc--CCcEEEEEECCCCCEEEEEEeCC
Confidence            999  999999999    999998874  222  24688999999999999999764

>1kw3_B 2,3-dihydroxybiphenyl dioxygenase; four TIME repetitions of the beta-alpha-beta-BETA-beta motif oxidoreductase; 1.45A {Pseudomonas SP} SCOP: d.32.1.3 d.32.1.3 PDB: 1dhy_A 1eiq_A 1eir_A* 1eil_A 1kw6_B* 1kw8_B* 1kw9_B* 1kwb_B 1kwc_B*

Probab=99.57  E-value=4.9e-14  Score=119.07  Aligned_cols=121  Identities=18%  Similarity=0.223  Sum_probs=87.1

Q ss_pred             CCccceeeEEEEeCCHHHHHHHHHHhcCCEEEEEeccC--CC-ceeeEEeeccCCCcceEEEeeecCCCCcccCCCCceE
Q 022831           19 KDKRRLLHAVYRVGDLDRTIKYYTECFGMELLRKRDVP--EE-KYSNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGH   95 (291)
Q Consensus        19 ~~~~~i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~--~~-~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~g~~~~~   95 (291)
                      +.+++|+|+.|.|+|++++++||+++|||++......+  ++ .....++..+.....  +.+....      ...+.+|
T Consensus       138 ~~~~~l~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~--~~~~~~~------~~~~~~h  209 (292)
T 1kw3_B          138 TGDQGIGHFVRCVPDTAKAMAFYTEVLGFVLSDIIDIQMGPETSVPAHFLHCNGRHHT--IALAAFP------IPKRIHH  209 (292)
T ss_dssp             CGGGCSCEEEEECSCHHHHHHHHHHTTCCEEEEEEEEEEETTEEEEEEEEESSSBSCS--EEEECCS------CSSSEEE
T ss_pred             cCCcccceEEEecCCHHHHHHHHHhccCCEEeeeeecccCCCccceEEEEEECCCcce--EEEecCC------CCCceEE
Confidence            56789999999999999999999999999987543221  11 123455554332222  3333211      1247889


Q ss_pred             EEEEECCHHH---HHHHHHHcCCeeeeCCccCCCCceEEEEEECCCCc-EEEEEecC
Q 022831           96 LAIATEDVYK---MVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGY-IFELIQRG  148 (291)
Q Consensus        96 i~~~v~d~~~---~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dP~G~-~iel~~~~  148 (291)
                      ++|.|+|+++   ++++|+ +|+++...|...+.+...++||+||+|+ .|||....
T Consensus       210 iaf~v~d~~~v~~~~~~l~-~G~~~~~~p~~~~~~~~~~~y~~DPdG~~~iEl~~~~  265 (292)
T 1kw3_B          210 FMLQANTIDDVGYAFDRLD-AAGRITSLLGRHTNDQTLSFYADTPSPMIEVEFGWGP  265 (292)
T ss_dssp             EEEEBSSHHHHHHHHHHHH-HTTCBCBCSEEESSSCCEEEEEECSSTTCEEEEEECC
T ss_pred             EEEEcCCHHHHHHHHHHHh-CCCceeecCcccCCCCeEEEEEECCCCCeeEEEEECC
Confidence            9999998664   677999 9999887776665555556899999999 99999764

>3oxh_A RV0577 protein; kinase regulation, antibiotic resistance, mycobacterium tube structural genomics, PSI, protein structure initiative; HET: PMB XYL; 1.75A {Mycobacterium tuberculosis}

Probab=99.56  E-value=3.3e-14  Score=119.58  Aligned_cols=123  Identities=19%  Similarity=0.110  Sum_probs=88.0

Q ss_pred             CCCCceeeeeeeCCchhhHHHHHHhcCCeeeeeccCccc-ceeeeeeccCCCCcceEEEEeEecCceeeccCceeeEEEE
Q 022831          150 TPEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPEL-KCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAI  228 (291)
Q Consensus       150 ~~~~~~hv~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~~hia~  228 (291)
                      .++.+.|+.|.|+|++++++||+++|||+.......... .+..+...  +   .....+....+..+ ...++.++++|
T Consensus        29 ~~g~~~~v~l~v~D~~~a~~FY~~vlG~~~~~~~~~~~~~~~~~~~~~--g---~~~~~l~~~~~~~~-~~~~~~~~~~~  102 (282)
T 3oxh_A           29 RQGTPNWVDLQTTDQSAAKKFYTSLFGWGYDDNPVPGGGGVYSMATLN--G---EAVAAIAPMPPGAP-EGMPPIWNTYI  102 (282)
T ss_dssp             CTTSEEEEEEEESCHHHHHHHHHHHHCCEEEEEC-----CCEEEEEET--T---EEEEEEEECCSCC----CCCEEEEEE
T ss_pred             CCCCcEEEEEecCCHHHHHHHHHHhcCcEEeecCCCCCccCEEEEEeC--C---eeeEeeccCCCCCC-CCCCCcEEEEE
Confidence            457899999999999999999999999998765322110 24333322  1   12223332221111 12345689999


Q ss_pred             EecChHHHHHHHHHHHHhhCCeeeecccccCCCCceEEEEECCCCCeEEEEechh
Q 022831          229 STDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNED  283 (291)
Q Consensus       229 ~v~di~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~~  283 (291)
                      .|+|++++++++    +++|+++..+|...+. .+++++|+||+||.|||++..+
T Consensus       103 ~v~d~d~~~~~l----~~~G~~~~~~p~~~~~-~g~~~~~~DP~G~~i~l~~~~~  152 (282)
T 3oxh_A          103 AVDDVDAVVDKV----VPGGGQVMMPAFDIGD-AGRMSFITDPTGAAVGLWQANR  152 (282)
T ss_dssp             ECSCHHHHHTTT----TTTTCEEEEEEEEETT-TEEEEEEECTTCCEEEEEEESS
T ss_pred             EeCCHHHHHHHH----HHCCCEEEECCEecCC-CeEEEEEECCCCCEEEEEEccc
Confidence            999999999999    9999999988887664 3589999999999999999765

>3bt3_A Glyoxalase-related enzyme, ARAC type; VOC superfamily, PSI-2, NYSGXRC, structural genomics, prote structure initiative; 2.50A {Clostridium phytofermentans}

Probab=99.55  E-value=1.7e-14  Score=109.48  Aligned_cols=115  Identities=16%  Similarity=0.133  Sum_probs=78.0

Q ss_pred             CCceeeeeeeCCchhhHHHHHHhcCCeeeee-ccCcccceeeeeeccCCCCcceEEEEeEecCceeecc--Cc-------
Q 022831          152 EPLCQVMLRVGDLGRSIKFYEKALGMKLLRT-IDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTK--GN-------  221 (291)
Q Consensus       152 ~~~~hv~l~v~D~~~~~~Fy~~~lG~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~--~~-------  221 (291)
                      .++.|+.|.|+|++++.+||+++|||++... ...++  +.. + +       ..|.+...........  +.       
T Consensus        20 ~~~~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~--~~~-~-g-------~~l~l~~~~~~~~~~~~~~~~~~~g~~   88 (148)
T 3bt3_A           20 VRENGPVYFTKDMDKTVKWFEEILGWSGDIVARDDEG--FGD-Y-G-------CVFDYPSEVAVAHLTPFRGFHLFKGEP   88 (148)
T ss_dssp             EEECCCEEEESCHHHHHHHHHHTTCCEEEEEEECTTS--CEE-E-E-------EEESSCTTTTSCC--CCCSEEEEESCC
T ss_pred             EEeeeEEEEECCHHHHHHHHHhccCCEEEeeeecCCC--ccE-E-c-------cEEEEeccCCCcccccccccceeeccC
Confidence            3589999999999999999999999998531 11222  222 1 1       1133311110000000  11       


Q ss_pred             eeeEEEE-EecChHHHHHHHHHHHHhhCCeeeecccccCCCCceEEEEECCCCCeEEEEech
Q 022831          222 AYAQVAI-STDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNE  282 (291)
Q Consensus       222 g~~hia~-~v~di~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~  282 (291)
                      +.++.+| .|+|++++++++    +++|+++..+|...++ +.+.+||+|||||.|||+++.
T Consensus        89 ~~~~~~~~~v~dvd~~~~~l----~~~G~~~~~~~~~~~~-g~~~~~~~DPdG~~iel~~~~  145 (148)
T 3bt3_A           89 IKGVAGFMMIEGIDALHKYV----KENGWDQISDIYTQPW-GARECSITTTDGCILRFFESI  145 (148)
T ss_dssp             CSSEEEEEEEECHHHHHHHH----HHTTCCCBCCCEEETT-TEEEEEEECTTSCEEEEEEEC
T ss_pred             CCccEEEEEcCCHHHHHHHH----HHcCCccccCcccCCC-ccEEEEEECCCCCEEEEeeec
Confidence            1122255 999999999999    9999999888877764 568899999999999999864

>2wl9_A Catechol 2,3-dioxygenase; aromatic hydrocarbons catabolism, iron, oxidoreductase; 1.90A {Rhodococcus SP} PDB: 2wl3_A

Probab=99.55  E-value=5.8e-14  Score=119.45  Aligned_cols=121  Identities=15%  Similarity=0.235  Sum_probs=86.4

Q ss_pred             CCccceeeEEEEeCCHHHHHHHHHHhcCCEEEEEeccC--CC-ceeeEEeeccCCCcceEEEeeecCCCCcccCCCCceE
Q 022831           19 KDKRRLLHAVYRVGDLDRTIKYYTECFGMELLRKRDVP--EE-KYSNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGH   95 (291)
Q Consensus        19 ~~~~~i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~--~~-~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~g~~~~~   95 (291)
                      ..+.+|+|+.|.|+|++++++|| ++|||++......+  ++ .....++..+.....  +.+...      ....+..|
T Consensus       142 ~~~~~i~hv~l~v~D~~~s~~FY-~vLG~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~--~~~~~~------~~~~~~~h  212 (305)
T 2wl9_A          142 TEGQGLGHIIIREDDVEEATRFY-RLLGLEGAVEYKFALPNGAVGTPVFMHCNDRHHS--LAFGVG------PMDKRINH  212 (305)
T ss_dssp             CTTTCSCEEEECCSCHHHHHHHH-HHHTCEEEECBCEECTTSCEECCEEEESSSSSCS--EEECCS------CCSSSEEE
T ss_pred             cCCceeeeEEEECCCHHHHHHHH-HHcCCeeeeeEecccCCCccceEEEEEcCCCceE--EEEecC------CCCCCceE
Confidence            45789999999999999999999 99999986432211  11 223455554332222  222211      11247889


Q ss_pred             EEEEECC---HHHHHHHHHHcCCeeeeCCccCCCCceEEEEEECCCCcEEEEEecC
Q 022831           96 LAIATED---VYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFELIQRG  148 (291)
Q Consensus        96 i~~~v~d---~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dP~G~~iel~~~~  148 (291)
                      ++|.|+|   +++++++|+++|+++...|.....+...++||+||+||.|||+...
T Consensus       213 iaf~v~d~~~v~~~~~~l~~~G~~~~~~p~~~~~~~~~~~y~~DPdG~~iEl~~~~  268 (305)
T 2wl9_A          213 LMIEYTHLDDLGYAHDLVRQQKIDVTLQIGKHSNDEALTFYCANPSGWLWEPGWGS  268 (305)
T ss_dssp             EEEEESSHHHHHHHHHHHHHTTCCEEEEEEECTTTCCEEEEEECTTSSEEEEEECC
T ss_pred             EEEEcCCHHHHHHHHHHHHHcCCCccccCcccCCCCcEEEEEECCCCCEEEEEeCC
Confidence            9999998   6678889999999988776665555455689999999999999864

>1lgt_A Biphenyl-2,3-DIOL 1,2-dioxygenase; extradiol dioxygenase, 2,3-dihydroxybiphenyl, non-heme iron, anaerobic, PCB biodegradation; HET: BP3; 1.70A {Burkholderia xenovorans} SCOP: d.32.1.3 d.32.1.3 PDB: 1kmy_A* 1knd_A 1knf_A 1han_A* 1lkd_A*

Probab=99.54  E-value=1.2e-13  Score=117.07  Aligned_cols=121  Identities=17%  Similarity=0.227  Sum_probs=88.0

Q ss_pred             CCccceeeEEEEeCCHHHHHHHHHHhcCCEEEEEeccC--CC-ceeeEEeeccCCCcceEEEeeecCCCCcccCCCCceE
Q 022831           19 KDKRRLLHAVYRVGDLDRTIKYYTECFGMELLRKRDVP--EE-KYSNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGH   95 (291)
Q Consensus        19 ~~~~~i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~--~~-~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~g~~~~~   95 (291)
                      ..+.+|+|+.|.|+|++++++||+++|||++......+  ++ .....++..+...  ..+.+...  +    ...+..|
T Consensus       138 ~~~~~l~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~l~l~~~--~----~~~~~~h  209 (297)
T 1lgt_A          138 TGEQGLGHFVRCVPDSDKALAFYTDVLGFQLSDVIDMKMGPDVTVPAYFLHCNERH--HTLAIAAF--P----LPKRIHH  209 (297)
T ss_dssp             CGGGCSCEEEEECSCHHHHHHHHHHTTCCEEEEEEEEEEETTEEEEEEEEESSSBS--CSEEEECC--C----CSSSEEE
T ss_pred             cCccccceEEEecCCHHHHHHHHHHhcCCeeeeEEeccCCCCccceEEEEEeCCCc--ceEEEEcC--C----CCCCceE
Confidence            35689999999999999999999999999997542211  11 1234555543322  22334322  1    1347889


Q ss_pred             EEEEECCHHHHH---HHHHHcCCeeeeCCccCCCCceEEEEEECCCCcEEEEEecC
Q 022831           96 LAIATEDVYKMV---ENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFELIQRG  148 (291)
Q Consensus        96 i~~~v~d~~~~~---~~l~~~G~~~~~~~~~~~~g~~~~~~~~dP~G~~iel~~~~  148 (291)
                      ++|.|+|++++.   ++ +++|+++...|...+.+...++||+||+|+.|||+...
T Consensus       210 iaf~v~d~~~~~~~~~~-~~~G~~~~~~p~~~~~g~~~~~~~~DPdG~~iel~~~~  264 (297)
T 1lgt_A          210 FMLEVASLDDVGFAFDR-VDADGLITSTLGRHTNDHMVSFYASTPSGVEVEYGWSA  264 (297)
T ss_dssp             EEEEBSCHHHHHHHHHH-HHTTTCEEEEEEEESSSCCEEEEEECTTSCEEEEEECC
T ss_pred             EEEeCCCHHHHHHHHHH-HhCCCcccccCcccCCCCcEEEEEECCCCcEEEEecCC
Confidence            999999987776   88 99999988877766665555689999999999999864

>1zsw_A Metallo protein, glyoxalase family protein; hypothetical protein from glyoxalase family, structural GENO PSI, protein structure initiative; 1.65A {Bacillus cereus} SCOP: d.32.1.10 d.32.1.10

Probab=99.53  E-value=3e-13  Score=116.73  Aligned_cols=121  Identities=19%  Similarity=0.201  Sum_probs=84.6

Q ss_pred             cCCccceeeEEEEeCCHHHHHHHHHHhcCCEEEEEeccCCCceeeEEeeccCCCc-ceEEEeeecCCCCcccCCCCceEE
Q 022831           18 KKDKRRLLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQS-YFVVELTYNYGVTSYDIGTGFGHL   96 (291)
Q Consensus        18 ~~~~~~i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~l~~~~~~~~~~~g~~~~~i   96 (291)
                      .+++.+|+|+.|.|+|++++++||+++|||++.....    .  ...+..++.+. ...+.+.. ..........++.|+
T Consensus       175 ~~~~~~l~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~~----~--~~~~~~~~~g~~~~~~~~~~-~~~~~~~~~~~~~hi  247 (338)
T 1zsw_A          175 KHQIQGMGSVELTVRRLDKMASTLTEIFGYTEVSRND----Q--EAIFQSIKGEAFGEIVVKYL-DGPTEKPGRGSIHHL  247 (338)
T ss_dssp             GGSCCEEEEEEEEESCHHHHHHHHHHTTCCEEEEECS----S--EEEEESSTTCSTTCEEEEEC-CSSBCBCCBTCEEEE
T ss_pred             cccCceEEEEEEEECCHHHHHHHHHHhcCCEEEeecC----C--eEEEEecCCCCceEEEEecc-CCCCCCCCCCceEEE
Confidence            4678999999999999999999999999999976532    1  23343321111 12233322 111111112357899


Q ss_pred             EEEEC---CHHHHHHHHHHcCCeeeeCCccCCCCceEEEEEECCCCcEEEEEecC
Q 022831           97 AIATE---DVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFELIQRG  148 (291)
Q Consensus        97 ~~~v~---d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dP~G~~iel~~~~  148 (291)
                      +|.|+   |+++++++|+++|+++. ++... ++ ...+||+||+|+.|||++..
T Consensus       248 af~v~~~~dv~~~~~~l~~~G~~~~-~~~~~-~~-~~~~~~~DPdG~~iEl~~~~  299 (338)
T 1zsw_A          248 AIRVKNDAELAYWEEQVKQRGFHSS-GIIDR-FY-FKSLYFRESNGILFEIATDG  299 (338)
T ss_dssp             EEEESSHHHHHHHHHHHHHTTCCCC-CCEEC-SS-EEEEEEECTTCCEEEEEEEE
T ss_pred             EEEeCCHHHHHHHHHHHHHCCCcee-eeeec-Cc-eEEEEEECCCCCEEEEEEcC
Confidence            99998   69999999999999985 44443 23 34589999999999999864

>2ehz_A 1,2-dihydroxynaphthalene dioxygenase; extradiol dioxygenase, protein substrate complex, oxidoreduc; 1.35A {Pseudomonas SP} PDB: 2ei0_A* 2ei1_A* 2ei3_A* 2ei2_A

Probab=99.52  E-value=1e-13  Score=117.72  Aligned_cols=120  Identities=14%  Similarity=0.209  Sum_probs=84.8

Q ss_pred             CccceeeEEEEeCCHHHHHHHHHHhcCCEEEEEeccC--CC-ceeeEEeeccCCCcceEEEeeecCCCCcccCCCCceEE
Q 022831           20 DKRRLLHAVYRVGDLDRTIKYYTECFGMELLRKRDVP--EE-KYSNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHL   96 (291)
Q Consensus        20 ~~~~i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~--~~-~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~g~~~~~i   96 (291)
                      ..++|+|+.|.|+|++++++|| ++|||++......+  ++ .....++..+...  ..+.+...  .    ...+..|+
T Consensus       146 ~~~~l~hv~l~v~D~~~a~~FY-~~lG~~~~~~~~~~~~~g~~~~~~~~~~~~~~--~~~~~~~~--~----~~~~~~hi  216 (302)
T 2ehz_A          146 GDQGLGHCIVRQTDVAEAHKFY-SLLGFRGDVEYRIPLPNGMTAELSFMHCNARD--HSIAFGAM--P----AAKRLNHL  216 (302)
T ss_dssp             GGGCSCEEEECCSCHHHHHHHH-HHTTCBCCEEEEEECTTSCEEEEEEEBSSSBS--CSEEECSC--C----CSSSEEEE
T ss_pred             CCCccceEEEEcCCHHHHHHHH-HhcCCeeeeEEeccCCCCcceEEEEEEeCCCC--cEEEEecC--C----CCCceeEE
Confidence            4579999999999999999999 99999986432211  22 2234555543221  12333211  1    12477899


Q ss_pred             EEEECCHHH---HHHHHHHcCCeeeeCCccCCCCceEEEEEECCCCcEEEEEecC
Q 022831           97 AIATEDVYK---MVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFELIQRG  148 (291)
Q Consensus        97 ~~~v~d~~~---~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dP~G~~iel~~~~  148 (291)
                      +|.|+|+++   ++++|+++|+++..+|.....+...++|++||+|+.|||+...
T Consensus       217 af~v~d~~~v~~~~~~l~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iEl~~~~  271 (302)
T 2ehz_A          217 MLEYTHMEDLGYTHQQFVKNEIDIALQLGIHANDKALTFYGATPSGWLIEPGWRG  271 (302)
T ss_dssp             EEEESSHHHHHHHHHHHHHTTCCEEEEEEECTTTCCEEEEEECTTSSEEEEEECC
T ss_pred             EEEcCCHHHHHHHHHHHHHCCCcEEeCCcccCCCCceEEEEECCCCcEEEEEECc
Confidence            999998764   6779999999988777666555455689999999999999753

>1xy7_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G48480, reductively methylated protein, CATH 3.10.180 fold; 1.80A {Arabidopsis thaliana} SCOP: d.32.1.9 PDB: 2q48_A

Probab=99.52  E-value=9e-14  Score=107.53  Aligned_cols=121  Identities=15%  Similarity=0.139  Sum_probs=77.9

Q ss_pred             ceeeeeeeCC--chhhHHHHHHhcCCeeeeec-------cCcccceeeeeeccCCCCcceEEEEeEecCc-e-eeccC-c
Q 022831          154 LCQVMLRVGD--LGRSIKFYEKALGMKLLRTI-------DSPELKCALAMLGYAEEDQTTVLELAYSYGV-T-EYTKG-N  221 (291)
Q Consensus       154 ~~hv~l~v~D--~~~~~~Fy~~~lG~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~-~-~~~~~-~  221 (291)
                      -.+..|.|+|  ++++++||+++|||++....       ..+.+.+....+..+    ...|.+...... . +...+ .
T Consensus        25 ~i~~~L~v~D~~~~~A~~FY~~vfG~~~~~~~~~~~~~~~~~~~~~~~a~l~~~----g~~l~l~~~~~~~~~~~~~~~~  100 (166)
T 1xy7_A           25 EFKQMLLVEAQKVGDAVTFYKSAFGAIESGHSLYPKRKLDQELPHVLSSELNLA----GSSFVVCDVSSLPGFSTAKSEG  100 (166)
T ss_dssp             EEEEEEEECTTCHHHHHHHHHHHHCCEEC---------------CCCEEEEEET----TEEEEEEEGGGSTTCCCCCTTS
T ss_pred             eEEEEEEECCcCHHHHHHHHHHHhCCEEEEEEccCCCCCCCCCCcEEEEEEEEC----CeEEEEeCCCcccCCccccCCC
Confidence            4677899999  99999999999999987543       111121222223322    133444321110 0 01110 2


Q ss_pred             eeeEEEEEecChHHHHHHHHHHHHhhCCeeeeccccc--CCCCceEEEEECCCCCeEEEEechhhh
Q 022831          222 AYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPI--PGLNTKITSFVDPDGWKTVLVDNEDFL  285 (291)
Q Consensus       222 g~~hia~~v~di~~~~~~l~~~~~~~G~~~~~~p~~~--~~~~~~~~~~~DPdG~~iel~~~~~~~  285 (291)
                      ..+|++|.|+|++++++++    +++|++ ..+|...  ++  .++++|+||+||.|+|+++....
T Consensus       101 ~g~~l~~~vdDvda~~~~l----~~~G~~-~~~~~~~~~~~--~r~~~v~DP~G~~~~l~~~~~~~  159 (166)
T 1xy7_A          101 SGVTFLLGTKDAEAAVAKA----VDAGAV-KVEVTEAEVEL--GFKGKVTDPFGVTWIFAEKKTVI  159 (166)
T ss_dssp             CCCEEEEECSCHHHHHHHH----HHTTCE-ECCCCHHHHHT--TEEEEEECTTSCEEEEEC-----
T ss_pred             CcEEEEEEcCCHHHHHHHH----HHCCCE-ECCcccccCcc--cEEEEEECCCCCEEEEEeecCCC
Confidence            2358999999999999999    999999 8888877  65  68999999999999999976543

>4ghg_A Homoprotocatechuate 2,3-dioxygenase; oxygen activation, Fe(II), 2-His-1-carboxylate triad, 4-nitrocatechol, OXY complex, oxidoreductase; HET: P6G PG4 DHY; 1.50A {Brevibacterium fuscum} PDB: 1q0o_A 1q0c_A 2iga_A* 2ig9_A 3ojj_A* 3bza_A* 3ojk_A* 3ojt_A* 3ojn_A* 4ghh_A* 4ghc_A 4ghd_A* 4ghe_A* 4ghf_A* 3eck_A* 3ecj_A*

Probab=99.50  E-value=2.4e-13  Score=118.25  Aligned_cols=115  Identities=23%  Similarity=0.172  Sum_probs=84.1

Q ss_pred             CCceeeeeeeCCchhhHHHHHHhcCCeeeeeccCcccceeeeeeccCCCCcceEEEEeEecCceeeccCceeeEEEEEec
Q 022831          152 EPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAISTD  231 (291)
Q Consensus       152 ~~~~hv~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~~hia~~v~  231 (291)
                      .+|.||.|.|+|++++++||+++|||++..+.+  +   . .++...+...+..+.+...       ..+++.|++|.|.
T Consensus        16 ~rl~hV~l~V~DLe~s~~FY~dvLGL~~~~~~~--~---~-~~lr~~~~~~~~~l~l~~~-------~~~gl~~~a~~v~   82 (365)
T 4ghg_A           16 LRCAYAELVVTDLAKSRNFYVDVLGLHVSYEDE--N---Q-IYLRSFEEFIHHNLVLTKG-------PVAALKAMAFRVR   82 (365)
T ss_dssp             EEEEEEEEEESCHHHHHHHHTTTTCCEEEEECS--S---E-EEEECTTCCSSCSEEEEEC-------SSCEEEEEEEEES
T ss_pred             CEEEEEEEEeCCHHHHHHHHhhCCCCEEEEEcC--C---E-EEEEeCCCCcceEEEeccC-------CCCCcceEEEEeC
Confidence            358999999999999999999999999877632  1   1 2333223223344555431       2458999999997


Q ss_pred             C---hHHHHHHHHHHHHhhCCeeeecccccCCCCceEEEEECCCCCeEEEEechh
Q 022831          232 D---VYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNED  283 (291)
Q Consensus       232 d---i~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~~  283 (291)
                      +   ++++.++|    +++|+++...+.......++.++|+|||||.|||+...+
T Consensus        83 s~~dLd~~~~~L----~~~Gv~v~~~~~~~~~~~g~~~~f~DPdG~~iEl~~~~~  133 (365)
T 4ghg_A           83 TPEDVDKAEAYY----QELGCRTERRKDGFVKGIGDALRVEDPLGFPYEFFFETT  133 (365)
T ss_dssp             SHHHHHHHHHHH----HHTTCCEEEETTCSSTTBCSEEEEECTTSCEEEEECCBC
T ss_pred             CHHHHHHHHHHH----HHcCCcceeccccccCCCceEEEEECCCCCEEEEEEEee
Confidence            5   66677777    999999887665433334678999999999999997544

>2r5v_A PCZA361.1; dioxygenase, non-heme iron, vancomycin, oxidoreductase; HET: HHH; 2.30A {Amycolatopsis orientalis}

Probab=99.50  E-value=1.8e-13  Score=118.96  Aligned_cols=130  Identities=18%  Similarity=0.312  Sum_probs=91.6

Q ss_pred             CcCCccceeeEEEEeC--CHHHHHHHHHHhcCCEEEEEec--cCCCceeeEEeeccCCCcceEEEeeecCCC---Cc---
Q 022831           17 PKKDKRRLLHAVYRVG--DLDRTIKYYTECFGMELLRKRD--VPEEKYSNAFLGFGPEQSYFVVELTYNYGV---TS---   86 (291)
Q Consensus        17 ~~~~~~~i~hv~l~v~--d~~~~~~FY~~~lG~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~---~~---   86 (291)
                      ..+++++|+|+++.|+  |++++.+||+++|||++....+  .+.......++..+.  ..+.+++......   ..   
T Consensus       152 ~~~~~~~l~Hv~l~V~~~D~~~~~~FY~~vLGf~~~~~~~~~~~~~~~~~~~l~~~~--g~~~l~l~~~~~~~~~~~~~~  229 (357)
T 2r5v_A          152 GDVDLLGIDHFAICLNAGDLGPTVEYYERALGFRQIFDEHIVVGAQAMNSTVVQSAS--GAVTLTLIEPDRNADPGQIDE  229 (357)
T ss_dssp             TTCCCCEEEEEEEECCTTCHHHHHHHHHHHHCCEEEEEEEEEETTEEEEEEEEECTT--SCCEEEEEEECTTSBCCHHHH
T ss_pred             CCCCcceEeEEEEEEchhhHHHHHHHHHHhcCCcEEEEEeeccCCcceEEEEEECCC--CCEEEEEeeecCCCCCchhHH
Confidence            3467899999999999  9999999999999999975432  222233455555432  3345666543321   10   


Q ss_pred             c---cCCCCceEEEEEECCHHHHHHHHHHcCCeeeeCCccCC---------CCc-------eEEEEEECCCCcEEEEEec
Q 022831           87 Y---DIGTGFGHLAIATEDVYKMVENIRAKGGNVTREPGPLK---------GMT-------THFAFVKDPDGYIFELIQR  147 (291)
Q Consensus        87 ~---~~g~~~~~i~~~v~d~~~~~~~l~~~G~~~~~~~~~~~---------~g~-------~~~~~~~dP~G~~iel~~~  147 (291)
                      +   ..+.|++||||.|+|+++++++|+++|+++...|....         .+.       ..+++++||+|++++|++.
T Consensus       230 ~~~~~~~~g~~Hiaf~v~Di~~~~~~L~~~Gv~~~~~p~~yy~~~~~r~~~~~~~~~~~~~~~~l~~~Dp~G~llqi~t~  309 (357)
T 2r5v_A          230 FLKDHQGAGVQHIAFNSNDAVRAVKALSERGVEFLKTPGAYYDLLGERITLQTHSLDDLRATNVLADEDHGGQLFQIFTA  309 (357)
T ss_dssp             HHHHHTSSEEEEEEEECSCHHHHHHHHHHTTCCBCCCCHHHHHTTTTTCCCSSSCHHHHHHHTCEEEEETTEEEEEEEBC
T ss_pred             HHHhcCCCCccEEEEEcCCHHHHHHHHHHcCCCcCCCchhHHHHHHHhhccchhhHHHHHHcCeEEecCCCceEEEEEcc
Confidence            1   13568999999999999999999999999776652210         000       0247899999999999975


Q ss_pred             C
Q 022831          148 G  148 (291)
Q Consensus       148 ~  148 (291)
                      +
T Consensus       310 ~  310 (357)
T 2r5v_A          310 S  310 (357)
T ss_dssp             C
T ss_pred             C
Confidence            4

>2zw5_A Bleomycin acetyltransferase; dimer, two domains; HET: COA; 2.40A {Streptomyces verticillus} PDB: 2zw4_A* 2zw6_A 2zw7_A*

Probab=99.49  E-value=1.5e-12  Score=110.08  Aligned_cols=169  Identities=14%  Similarity=0.101  Sum_probs=106.1

Q ss_pred             CceEEEEEECC-HHHHHHHHHHcCCeeeeCCccC--CCCceEEEEEECCCCcEEEEEecC---CCCCCceeeeeeeCCch
Q 022831           92 GFGHLAIATED-VYKMVENIRAKGGNVTREPGPL--KGMTTHFAFVKDPDGYIFELIQRG---PTPEPLCQVMLRVGDLG  165 (291)
Q Consensus        92 ~~~~i~~~v~d-~~~~~~~l~~~G~~~~~~~~~~--~~g~~~~~~~~dP~G~~iel~~~~---~~~~~~~hv~l~v~D~~  165 (291)
                      ++..|.+.|.. =..+.+-+++.|++........  ..|..         -..+.+....   ..+....++.+.|.|++
T Consensus       125 g~~~i~~~v~~~N~~s~~ly~k~GF~~~g~~~~~~~~~g~d---------~~~~~l~~~~~~~~~~~~~~~~~l~v~D~~  195 (301)
T 2zw5_A          125 GLDRVEAWIEAGNRRSLAVAARVGLTERARLAQHYPHRPGP---------HEMVVLGKARAEEPLTTLAVITELPVRDVA  195 (301)
T ss_dssp             CCSEEEEEEESSCHHHHHHHHHTTCEEEEEEEECCTTSSSC---------EEEEEEEEESSCCSCEEEEEEEEEEESCHH
T ss_pred             CccEEEEEeCCCCHHHHHHHHHcCCcCcceehhhcccCCCC---------eEEEEEeHHHhhhhcccceeEEEEEeCCHH
Confidence            66677777742 2344566788898865431111  11211         1223333322   12233467889999999


Q ss_pred             hhHHHHHHhcCCeeeeeccCcccceeeeeeccCCCCcceEEEEeEecCceeeccCceeeEEEEEec-ChHHHHHHHHHHH
Q 022831          166 RSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAISTD-DVYKSAEVVNLVT  244 (291)
Q Consensus       166 ~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~~hia~~v~-di~~~~~~l~~~~  244 (291)
                      ++.+||+++|||+.......+ +.+.  .+..++......+.+...+.    ..+.+..+++|.|+ |++++++++    
T Consensus       196 ~a~~FY~~~lG~~~~~~~~~~-~~~~--~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~v~~dvd~~~~~~----  264 (301)
T 2zw5_A          196 ATLRLVEAALGARTAFAIGDP-PEFA--EAALTPWSAGPRFRLAAVPG----PGPVEPVRLHLDAAGTADSLHRRA----  264 (301)
T ss_dssp             HHHHHHHHHSCCEEEEEEETT-EEEE--EEESSSSSSSSEEEEEECCC----SSCCCCCEEEEEEESCHHHHHHHH----
T ss_pred             HHHHHHHHhcCCeEeeecCCC-ccEE--EEEcCCCccccccccccCCC----cCCCCceEEEEEcCccHHHHHHHH----
Confidence            999999999999987443222 2232  33332211112222211110    11223568999999 999999999    


Q ss_pred             HhhCCeeeecccccCCCCceEEEEECCCCCeEEEEec
Q 022831          245 QELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDN  281 (291)
Q Consensus       245 ~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iel~~~  281 (291)
                      +++|+++..+|...++ |.+.++|+|||||.|||.++
T Consensus       265 ~~~G~~~~~~~~~~~~-g~~~~~~~DPdG~~~~~~~~  300 (301)
T 2zw5_A          265 VDAGARVDGPPVRRPW-GRSEFVITLPEGHELTVSAP  300 (301)
T ss_dssp             HHTTCCEEEEEEECTT-SCEEEEEECTTSCEEEEEEC
T ss_pred             HHcCCccccCcccCCC-cceEEEEECCCCCEEEeeCC
Confidence            9999999998887764 46889999999999999985

>1xy7_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G48480, reductively methylated protein, CATH 3.10.180 fold; 1.80A {Arabidopsis thaliana} SCOP: d.32.1.9 PDB: 2q48_A

Probab=99.47  E-value=7.4e-13  Score=102.38  Aligned_cols=118  Identities=16%  Similarity=0.141  Sum_probs=77.9

Q ss_pred             ceeeEEEEeCC--HHHHHHHHHHhcCCEEEEEe-------ccCCCceeeEEeeccCCCcceEEEeeecCCC-C-cccC--
Q 022831           23 RLLHAVYRVGD--LDRTIKYYTECFGMELLRKR-------DVPEEKYSNAFLGFGPEQSYFVVELTYNYGV-T-SYDI--   89 (291)
Q Consensus        23 ~i~hv~l~v~d--~~~~~~FY~~~lG~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~-~-~~~~--   89 (291)
                      .-.+..|.|+|  ++++++||+++|||++....       ..+.+.+....+..+  +..  +.+...... . +...  
T Consensus        24 ~~i~~~L~v~D~~~~~A~~FY~~vfG~~~~~~~~~~~~~~~~~~~~~~~a~l~~~--g~~--l~l~~~~~~~~~~~~~~~   99 (166)
T 1xy7_A           24 TEFKQMLLVEAQKVGDAVTFYKSAFGAIESGHSLYPKRKLDQELPHVLSSELNLA--GSS--FVVCDVSSLPGFSTAKSE   99 (166)
T ss_dssp             EEEEEEEEECTTCHHHHHHHHHHHHCCEEC---------------CCCEEEEEET--TEE--EEEEEGGGSTTCCCCCTT
T ss_pred             ceEEEEEEECCcCHHHHHHHHHHHhCCEEEEEEccCCCCCCCCCCcEEEEEEEEC--CeE--EEEeCCCcccCCccccCC
Confidence            34688999999  99999999999999987532       111122223334433  222  333322111 0 1111  


Q ss_pred             CCCceEEEEEECCHHHHHHHHHHcCCeeeeCCccC--CCCceEEEEEECCCCcEEEEEecC
Q 022831           90 GTGFGHLAIATEDVYKMVENIRAKGGNVTREPGPL--KGMTTHFAFVKDPDGYIFELIQRG  148 (291)
Q Consensus        90 g~~~~~i~~~v~d~~~~~~~l~~~G~~~~~~~~~~--~~g~~~~~~~~dP~G~~iel~~~~  148 (291)
                      +.+ .+++|.|+|+++++++|+++|++ ..++...  ++ .+ +++++||+|+.|+|.+..
T Consensus       100 ~~g-~~l~~~vdDvda~~~~l~~~G~~-~~~~~~~~~~~-~r-~~~v~DP~G~~~~l~~~~  156 (166)
T 1xy7_A          100 GSG-VTFLLGTKDAEAAVAKAVDAGAV-KVEVTEAEVEL-GF-KGKVTDPFGVTWIFAEKK  156 (166)
T ss_dssp             SCC-CEEEEECSCHHHHHHHHHHTTCE-ECCCCHHHHHT-TE-EEEEECTTSCEEEEEC--
T ss_pred             CCc-EEEEEEcCCHHHHHHHHHHCCCE-ECCcccccCcc-cE-EEEEECCCCCEEEEEeec
Confidence            223 48999999999999999999999 8888777  66 33 588999999999999865

>1u6l_A Hypothetical protein; structural genomics, PSI, protein STRU initiative, NEW YORK SGX research center for structural GEN nysgxrc; 2.81A {Pseudomonas aeruginosa} SCOP: d.32.1.7

Probab=99.47  E-value=4.1e-12  Score=96.34  Aligned_cols=123  Identities=15%  Similarity=0.175  Sum_probs=81.6

Q ss_pred             cceeeEEEEeC-CHHHHHHHHHHhcCCEEEEEeccCC------------CceeeEEeeccCCCcceEEEeeecCCCCccc
Q 022831           22 RRLLHAVYRVG-DLDRTIKYYTECFGMELLRKRDVPE------------EKYSNAFLGFGPEQSYFVVELTYNYGVTSYD   88 (291)
Q Consensus        22 ~~i~hv~l~v~-d~~~~~~FY~~~lG~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~   88 (291)
                      +++ +..|.|. |++++++||+++||+++.......+            +....+.+..+  +..  +.+....+.....
T Consensus         3 m~~-~p~L~v~~d~~~A~~FY~~vfG~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~l~~~--~~~--l~~~d~~~~~~~~   77 (149)
T 1u6l_A            3 LQI-VPYLIFNGNCREAFSCYHQHLGGTLEAMLPFGDSPECGDIPADWKDKIMHARLVVG--SFA--LMASDNHPAYPYE   77 (149)
T ss_dssp             CEE-EEEEEESSCHHHHHHHHHHHHCSEEEEEEESTTTTC----CCSSCCCEEEEEEEET--TEE--EEEEECCTTSCCC
T ss_pred             ceE-EEEEEECCCHHHHHHHHHHHhCCEEEEEEEcccCCcccCCCcccCCcEEEEEEEEC--CEE--EEEEcCCCccCCC
Confidence            444 4788888 9999999999999999875421111            22223334433  222  2222221110111


Q ss_pred             CCCCceEEEEEECC---HHHHHHHHHHcCCeeeeCCccCCCCceEEEEEECCCCcEEEEEecCCCCC
Q 022831           89 IGTGFGHLAIATED---VYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFELIQRGPTPE  152 (291)
Q Consensus        89 ~g~~~~~i~~~v~d---~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dP~G~~iel~~~~~~~~  152 (291)
                      ...+ .+++|.|+|   +++++++|. +|+++..++.+.++|.+ +++++||+|+.|+|.+.....+
T Consensus        78 ~~~g-~~l~~~v~d~~evd~~~~~l~-~Gg~i~~p~~~~~wG~r-~~~v~Dp~G~~w~l~~~~~~~~  141 (149)
T 1u6l_A           78 GIKG-CSISLNVDSKAEAERLFNALA-EGGSVQMPLGPTFWAAS-FGMFTDRFGVAWMVNCEQDREG  141 (149)
T ss_dssp             CCCS-EEEEEECSSHHHHHHHHHHHH-TTSEEEEEEEEETTEEE-EEEEECTTSCEEEEEESCC---
T ss_pred             CCCc-eEEEEEcCCHHHHHHHHHHHH-CCCEEeecccccCcccc-eEEEECCCCCEEEEEEecccCC
Confidence            2223 589999998   789999985 89999999999998755 4789999999999998765443

>3pkv_A Toxoflavin lyase (TFLA); metalloenzyme, vicinal oxygen chelate superfamily; 1.34A {Paenibacillus polymyxa} PDB: 3pkw_A 3pkx_A* 3oul_A 3oum_A*

Probab=99.46  E-value=6.4e-13  Score=109.48  Aligned_cols=113  Identities=15%  Similarity=0.267  Sum_probs=81.9

Q ss_pred             CCCceeeeeeeCCchhhHHHHHHhcCCeeeeeccCcccceeeeeeccCCCCcceEEEEeEecCceeeccCceeeEEEEEe
Q 022831          151 PEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAIST  230 (291)
Q Consensus       151 ~~~~~hv~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~~hia~~v  230 (291)
                      ..++.|+.|.|+|++++++||+++|||++....+  +    .+++..+    ...+.+.....     .+.+..|++|.|
T Consensus        24 ~~~l~hV~L~V~Dle~s~~FY~~vLGl~~~~~~~--~----~~~L~~g----~~~l~l~~~~~-----~~~~~~hiaf~V   88 (252)
T 3pkv_A           24 MTSIKQLTLYTAELDRMLAFYTNMLGAQHVHEQA--D----AFTIQLG----VSQIQFRAAAD-----GTKPFYHIAINI   88 (252)
T ss_dssp             -CCEEEEEEEESCHHHHHHHHHHHHCGGGEEECS--S----EEEEEET----TEEEEEEECCT-----TCCCCCEEEEEE
T ss_pred             CceEEEEEEEeCCHHHHHHHHHHhcCCEEEEccC--C----EEEEEeC----CEEEEEEECCC-----CCCCeeEEEEEe
Confidence            4679999999999999999999999999876532  1    1333332    24555544221     134689999988


Q ss_pred             c--ChHHHHHHHHHHHHhhCCeeeec-ccc---cCCCCceEEEEECCCCCeEEEEechh
Q 022831          231 D--DVYKSAEVVNLVTQELGGKITRQ-PGP---IPGLNTKITSFVDPDGWKTVLVDNED  283 (291)
Q Consensus       231 ~--di~~~~~~l~~~~~~~G~~~~~~-p~~---~~~~~~~~~~~~DPdG~~iel~~~~~  283 (291)
                      +  ++++++++|    ++. +++..+ +..   ...++.+.+||+|||||.|||+++..
T Consensus        89 ~~~dld~~~~rL----~~~-v~~~~~~~~~~~~~~~~g~~~~~f~DPdGn~iEl~~~~~  142 (252)
T 3pkv_A           89 AANHFQEGKAWL----SGF-GELLTENDEDQAYFPFFNAYSCYVEDPSGNIIELISRQQ  142 (252)
T ss_dssp             CTTCHHHHHHHH----TTS-SCCCCBTTBSCEEETTTTEEEEEEECTTCCEEEEEEESS
T ss_pred             cHHHHHHHHHHH----Hhc-ceEeccCCccccccccCCeEEEEEECCCCCEEEEEEeCC
Confidence            6  588888888    888 887663 221   12335788999999999999999764

>1u6l_A Hypothetical protein; structural genomics, PSI, protein STRU initiative, NEW YORK SGX research center for structural GEN nysgxrc; 2.81A {Pseudomonas aeruginosa} SCOP: d.32.1.7

Probab=99.43  E-value=3.2e-12  Score=96.98  Aligned_cols=117  Identities=16%  Similarity=0.137  Sum_probs=77.6

Q ss_pred             eeeeeeC-CchhhHHHHHHhcCCeeeeeccCcc------------cceeeeeeccCCCCcceEEEEeEecCceeeccCce
Q 022831          156 QVMLRVG-DLGRSIKFYEKALGMKLLRTIDSPE------------LKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNA  222 (291)
Q Consensus       156 hv~l~v~-D~~~~~~Fy~~~lG~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g  222 (291)
                      ...|.+. |++++.+||+++||+++.......+            +......+..+    ...|.+....+....+...|
T Consensus         6 ~p~L~v~~d~~~A~~FY~~vfG~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~l~~~----~~~l~~~d~~~~~~~~~~~g   81 (149)
T 1u6l_A            6 VPYLIFNGNCREAFSCYHQHLGGTLEAMLPFGDSPECGDIPADWKDKIMHARLVVG----SFALMASDNHPAYPYEGIKG   81 (149)
T ss_dssp             EEEEEESSCHHHHHHHHHHHHCSEEEEEEESTTTTC----CCSSCCCEEEEEEEET----TEEEEEEECCTTSCCCCCCS
T ss_pred             EEEEEECCCHHHHHHHHHHHhCCEEEEEEEcccCCcccCCCcccCCcEEEEEEEEC----CEEEEEEcCCCccCCCCCCc
Confidence            3668888 9999999999999999875421100            11111222222    12333332211001111234


Q ss_pred             eeEEEEEecC---hHHHHHHHHHHHHhhCCeeeecccccCCCCceEEEEECCCCCeEEEEechh
Q 022831          223 YAQVAISTDD---VYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNED  283 (291)
Q Consensus       223 ~~hia~~v~d---i~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~~  283 (291)
                       ++++|.|+|   +++++++|    + .|+++..+|...++ +.++++|+||+|+.|+|++...
T Consensus        82 -~~l~~~v~d~~evd~~~~~l----~-~Gg~i~~p~~~~~w-G~r~~~v~Dp~G~~w~l~~~~~  138 (149)
T 1u6l_A           82 -CSISLNVDSKAEAERLFNAL----A-EGGSVQMPLGPTFW-AASFGMFTDRFGVAWMVNCEQD  138 (149)
T ss_dssp             -EEEEEECSSHHHHHHHHHHH----H-TTSEEEEEEEEETT-EEEEEEEECTTSCEEEEEESCC
T ss_pred             -eEEEEEcCCHHHHHHHHHHH----H-CCCEEeecccccCc-ccceEEEECCCCCEEEEEEecc
Confidence             689999998   67778777    6 79999999998886 5689999999999999998543

>1u7i_A Hypothetical protein; structural genomics, PA1358, PSI, PROT structure initiative; HET: MSE; 1.40A {Pseudomonas aeruginosa} SCOP: d.32.1.7

Probab=99.42  E-value=1.5e-11  Score=91.66  Aligned_cols=118  Identities=16%  Similarity=0.224  Sum_probs=80.9

Q ss_pred             cceeeEEEEeC--CHHHHHHHHHHhc-CCEEEEEeccC------CCceeeEEeeccCCCcceEEEeeecCCCCcccCCCC
Q 022831           22 RRLLHAVYRVG--DLDRTIKYYTECF-GMELLRKRDVP------EEKYSNAFLGFGPEQSYFVVELTYNYGVTSYDIGTG   92 (291)
Q Consensus        22 ~~i~hv~l~v~--d~~~~~~FY~~~l-G~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~g~~   92 (291)
                      +++. ..|.+.  |++++++||+++| ||++.......      ++....+.+..+.  ..+.  +...........+ .
T Consensus         5 ~~i~-~~L~v~~~d~~~A~~FY~~~f~G~~~~~~~~~~~~~~~~~~~~~~a~~~~~g--~~~~--~~~~~~~~~~~~~-~   78 (136)
T 1u7i_A            5 ARVR-PFLMFQGVQAEAAMNFYLSLFDDAEILQIQRYGAEGPGPEGSVLKALFRLGD--QSVH--CIDSHVRHAFDFT-P   78 (136)
T ss_dssp             CEEE-EEEEEESSCHHHHHHHHHHHCSSEEEEEEEECCTTCSSCTTSEEEEEEEETT--EEEE--EEEESSCCSCCCC-T
T ss_pred             ccce-EEEEECCCCHHHHHHHHHHHcCCCEeeEEEEcccCCCCCCCcEEEEEEEECC--EEEE--EECCCCCCCCCCC-C
Confidence            4555 667886  9999999999999 99987521111      1233334444432  2222  2211100111112 3


Q ss_pred             ceEEEEEECC---HHHHHHHHHHcCCeeeeCCccCCCCceEEEEEECCCCcEEEEEec
Q 022831           93 FGHLAIATED---VYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFELIQR  147 (291)
Q Consensus        93 ~~~i~~~v~d---~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dP~G~~iel~~~  147 (291)
                      ...++|.|+|   +++++++|. +|+++..++.+.++|.+ +++++||+|+.|+|...
T Consensus        79 ~~~l~~~v~d~~evd~~~~~l~-~Gg~v~~p~~~~~~G~~-~~~~~Dp~G~~w~l~~~  134 (136)
T 1u7i_A           79 AFSFFVDCESNAQIERLAEALS-DGGKALMPLGDYGFSQR-FAWLADRFGVSWQLNLA  134 (136)
T ss_dssp             TEEEEEECCCHHHHHHHHHHHH-TTSEEEEEEECCSSSSE-EEEEECTTSCEEEEEEC
T ss_pred             ceEEEEEcCCHHHHHHHHHHHH-cCCEEecccccCCCcce-EEEEECCCCCEEEEEec
Confidence            3578999999   999999999 99999999999998865 47899999999999874

>1u7i_A Hypothetical protein; structural genomics, PA1358, PSI, PROT structure initiative; HET: MSE; 1.40A {Pseudomonas aeruginosa} SCOP: d.32.1.7

Probab=99.40  E-value=6.8e-12  Score=93.62  Aligned_cols=114  Identities=15%  Similarity=0.129  Sum_probs=77.2

Q ss_pred             eeeeeC--CchhhHHHHHHhc-CCeeeee--ccC----cccceeeeeeccCCCCcceEEEEeEecCceeeccCceeeEEE
Q 022831          157 VMLRVG--DLGRSIKFYEKAL-GMKLLRT--IDS----PELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVA  227 (291)
Q Consensus       157 v~l~v~--D~~~~~~Fy~~~l-G~~~~~~--~~~----~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~~hia  227 (291)
                      ..|.+.  |.+++.+||+++| |+++...  ...    +++......+..++    ..+.+...........+ ..+.++
T Consensus         9 ~~L~v~~~d~~~A~~FY~~~f~G~~~~~~~~~~~~~~~~~~~~~~a~~~~~g----~~~~~~~~~~~~~~~~~-~~~~l~   83 (136)
T 1u7i_A            9 PFLMFQGVQAEAAMNFYLSLFDDAEILQIQRYGAEGPGPEGSVLKALFRLGD----QSVHCIDSHVRHAFDFT-PAFSFF   83 (136)
T ss_dssp             EEEEEESSCHHHHHHHHHHHCSSEEEEEEEECCTTCSSCTTSEEEEEEEETT----EEEEEEEESSCCSCCCC-TTEEEE
T ss_pred             EEEEECCCCHHHHHHHHHHHcCCCEeeEEEEcccCCCCCCCcEEEEEEEECC----EEEEEECCCCCCCCCCC-CceEEE
Confidence            557776  9999999999999 9998652  211    11222222223221    22322222100111112 236799


Q ss_pred             EEecC---hHHHHHHHHHHHHhhCCeeeecccccCCCCceEEEEECCCCCeEEEEec
Q 022831          228 ISTDD---VYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDN  281 (291)
Q Consensus       228 ~~v~d---i~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iel~~~  281 (291)
                      |.|+|   ++++++++    . +|+++..+|...++ +.++++++||+|+.|+|+.+
T Consensus        84 ~~v~d~~evd~~~~~l----~-~Gg~v~~p~~~~~~-G~~~~~~~Dp~G~~w~l~~~  134 (136)
T 1u7i_A           84 VDCESNAQIERLAEAL----S-DGGKALMPLGDYGF-SQRFAWLADRFGVSWQLNLA  134 (136)
T ss_dssp             EECCCHHHHHHHHHHH----H-TTSEEEEEEECCSS-SSEEEEEECTTSCEEEEEEC
T ss_pred             EEcCCHHHHHHHHHHH----H-cCCEEecccccCCC-cceEEEEECCCCCEEEEEec
Confidence            99999   99999999    9 99999999998886 46899999999999999975

>2zw5_A Bleomycin acetyltransferase; dimer, two domains; HET: COA; 2.40A {Streptomyces verticillus} PDB: 2zw4_A* 2zw6_A 2zw7_A*

Probab=99.39  E-value=1.4e-11  Score=104.15  Aligned_cols=118  Identities=12%  Similarity=-0.010  Sum_probs=81.9

Q ss_pred             cceeeEEEEeCCHHHHHHHHHHhcCCEEEEEeccCCCceeeEEeeccCCCcceEEEeeecCCCCcccCCCCceEEEEEEC
Q 022831           22 RRLLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHLAIATE  101 (291)
Q Consensus        22 ~~i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~g~~~~~i~~~v~  101 (291)
                      ....++.+.|.|++++++||+++|||++......+ +.  ...+..+.......+.+....    ...+....+++|.|+
T Consensus       182 ~~~~~~~l~v~D~~~a~~FY~~~lG~~~~~~~~~~-~~--~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~v~  254 (301)
T 2zw5_A          182 TLAVITELPVRDVAATLRLVEAALGARTAFAIGDP-PE--FAEAALTPWSAGPRFRLAAVP----GPGPVEPVRLHLDAA  254 (301)
T ss_dssp             EEEEEEEEEESCHHHHHHHHHHHSCCEEEEEEETT-EE--EEEEESSSSSSSSEEEEEECC----CSSCCCCCEEEEEEE
T ss_pred             cceeEEEEEeCCHHHHHHHHHHhcCCeEeeecCCC-cc--EEEEEcCCCccccccccccCC----CcCCCCceEEEEEcC
Confidence            34568899999999999999999999987533221 22  224444321100111111111    011223457999999


Q ss_pred             -CHHHHHHHHHHcCCeeeeCCccCCCCceEEEEEECCCCcEEEEEec
Q 022831          102 -DVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFELIQR  147 (291)
Q Consensus       102 -d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dP~G~~iel~~~  147 (291)
                       |++++++++.++|+++..+|...++|.+ .++|+||+||.|+|.+.
T Consensus       255 ~dvd~~~~~~~~~G~~~~~~~~~~~~g~~-~~~~~DPdG~~~~~~~~  300 (301)
T 2zw5_A          255 GTADSLHRRAVDAGARVDGPPVRRPWGRS-EFVITLPEGHELTVSAP  300 (301)
T ss_dssp             SCHHHHHHHHHHTTCCEEEEEEECTTSCE-EEEEECTTSCEEEEEEC
T ss_pred             ccHHHHHHHHHHcCCccccCcccCCCcce-EEEEECCCCCEEEeeCC
Confidence             9999999999999999888888887755 48899999999999874

>1tsj_A Conserved hypothetical protein; structural genomics, protein structure initiative, PSI, nysgxrc; 2.60A {Staphylococcus aureus subsp} SCOP: d.32.1.7

Probab=99.31  E-value=7e-11  Score=88.24  Aligned_cols=120  Identities=14%  Similarity=0.222  Sum_probs=81.6

Q ss_pred             CCccceeeEEEEeCCHHHHHHHHHHhc-CCEEEEEeccC------CCceeeEEeeccCCCcceEEEeeecCCCCcccCCC
Q 022831           19 KDKRRLLHAVYRVGDLDRTIKYYTECF-GMELLRKRDVP------EEKYSNAFLGFGPEQSYFVVELTYNYGVTSYDIGT   91 (291)
Q Consensus        19 ~~~~~i~hv~l~v~d~~~~~~FY~~~l-G~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~g~   91 (291)
                      |.+++|....+.+.|.+++++||+++| |+++.......      ++....+.+.+++  ..+.+  ... .+ ..  +.
T Consensus         1 M~~~~i~p~l~~~~d~~eA~~FY~~~f~G~~~~~~~~~~~~~~~~~~~v~ha~l~~~~--~~~m~--~d~-~~-~~--~~   72 (139)
T 1tsj_A            1 MDIPKITTFLMFNNQAEEAVKLYTSLFEDSEIITMAKYGENGPGDPGTVQHSIFTLNG--QVFMA--IDA-NS-GT--EL   72 (139)
T ss_dssp             CCCCSEEEEEECSSCHHHHHHHHHHHSSSCEEEEEEECC-----CTTSEEEEEEEETT--EEEEE--EC-----------
T ss_pred             CCCCceeEEEEECCCHHHHHHHHHHHcCCCEEEEEEecCcCCCCCCCcEEEEEEEECC--EEEEE--ECC-CC-CC--Cc
Confidence            345677766666679999999999999 99997532111      2344444455432  22221  111 11 11  11


Q ss_pred             CceEEEEEECC---HHHHHHHHHHcCCeeeeCCccCCCCceEEEEEECCCCcEEEEEecCC
Q 022831           92 GFGHLAIATED---VYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFELIQRGP  149 (291)
Q Consensus        92 ~~~~i~~~v~d---~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dP~G~~iel~~~~~  149 (291)
                      . ..+++.|+|   +++++++|. +|+++..++.+.+||.+ +.+++||+|+.|+|.....
T Consensus        73 ~-~sl~~~~~d~~evd~~~~~l~-~G~~v~~p~~~~~wG~~-~g~v~Dp~G~~W~i~~~~~  130 (139)
T 1tsj_A           73 P-ISLFVTVKDTIEMERLFNGLK-DEGAILMPKTNMPPYRE-FAWVQDKFGVSFQLALPEE  130 (139)
T ss_dssp             C-CCEEEECSSHHHHHHHHHHHH-TTCEEEEEEEEETTEEE-EEEEECTTSCEEEEEECC-
T ss_pred             e-EEEEEECCCHHHHHHHHHHHh-CCCEEeecccccCCCce-EEEEECCCCCEEEEeeccc
Confidence            2 578999987   788899998 79999999999999876 4899999999999998654

>1t47_A 4-hydroxyphenylpyruvate dioxygenase; triketone inhibitor, iron, oxidoreductase; HET: NTD; 2.50A {Streptomyces avermitilis} SCOP: d.32.1.3 d.32.1.3

Probab=99.31  E-value=1.9e-11  Score=107.07  Aligned_cols=126  Identities=17%  Similarity=0.230  Sum_probs=91.4

Q ss_pred             CCCceeeeeeeCCchhhHHHHHHhcCCeeeeeccCccc--ceeeeeeccCCCCcceEEEEeEecCceee----------c
Q 022831          151 PEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPEL--KCALAMLGYAEEDQTTVLELAYSYGVTEY----------T  218 (291)
Q Consensus       151 ~~~~~hv~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~l~~~~~~~~~----------~  218 (291)
                      ..+++||.+.|+|++++.+||+++|||++..+.....+  ......++.+    ...|+|.........          .
T Consensus        20 i~~i~hV~i~V~D~~~a~~FY~~~LGf~~~~~~~~~~~~~~~~~~~~~~g----~~~l~l~~~~~~~~~~~~~~~~~~~~   95 (381)
T 1t47_A           20 VKGMDAVVFAVGNAKQAAHYYSTAFGMQLVAYSGPENGSRETASYVLTNG----SARFVLTSVIKPATPWGHFLADHVAE   95 (381)
T ss_dssp             CCEEEEEEEECSCHHHHHHHHHHTSCCEEEEEESGGGTCCSEEEEEEEET----TEEEEEEEESSCCSHHHHHHHHHHHH
T ss_pred             CceEEEEEEEECCHHHHHHHHHHcCCCEEEEEEcCCCCCceEEEEEEecC----CEEEEEecCCCCCCcchhHHHHHHHh
Confidence            45799999999999999999999999998775321111  2334444433    355666653211110          1


Q ss_pred             cCceeeEEEEEecChHHHHHHHHHHHHhhCCeeeecccccC--CCCceEEEEECCCCCeEEEEechhh
Q 022831          219 KGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIP--GLNTKITSFVDPDGWKTVLVDNEDF  284 (291)
Q Consensus       219 ~~~g~~hia~~v~di~~~~~~l~~~~~~~G~~~~~~p~~~~--~~~~~~~~~~DPdG~~iel~~~~~~  284 (291)
                      .++++.|++|.|+|++++++++    +++|+++..+|....  .+..+++.++||+|+.++|+++...
T Consensus        96 ~g~gv~~iaf~V~D~~~~~~~l----~~~G~~~~~~p~~~~~~~g~~~~~~~~~pgg~~~~lv~~~~~  159 (381)
T 1t47_A           96 HGDGVVDLAIEVPDARAAHAYA----IEHGARSVAEPYELKDEHGTVVLAAIATYGKTRHTLVDRTGY  159 (381)
T ss_dssp             HCSEEEEEEEECSCHHHHHHHH----HHTTCCEEEEEEEEEETTEEEEEEEEECSTTCEEEEEEEEEE
T ss_pred             cCCceEEEEEEECCHHHHHHHH----HHcCCEEeeccccccCCCCeEEEEEEecCCCcEEEEEecCCC
Confidence            2579999999999999999999    999999998876421  1123578899999999999997543

>1sqd_A 4-hydroxyphenylpyruvate dioxygenase; oxidoreductase; 1.80A {Arabidopsis thaliana} SCOP: d.32.1.3 d.32.1.3 PDB: 1tfz_A* 1tg5_A* 1sp9_A

Probab=99.24  E-value=4.3e-11  Score=105.84  Aligned_cols=124  Identities=15%  Similarity=0.112  Sum_probs=91.1

Q ss_pred             CceeeeeeeCCchhhHHHHHHhcCCeeeeeccCc--ccceeeeeeccCCCCcceEEEEeEecCce---------------
Q 022831          153 PLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSP--ELKCALAMLGYAEEDQTTVLELAYSYGVT---------------  215 (291)
Q Consensus       153 ~~~hv~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~l~l~~~~~~~---------------  215 (291)
                      +++||.|.|+|++++.+||+++|||++....+.+  ...+..+.++.+    ...|.|.......               
T Consensus        25 ~i~HV~i~V~Dle~a~~FY~~~LGf~~v~~~~~~~g~~~~~~~~l~~g----~~~l~L~~~~~~~~~~~~~~~~~~~p~~  100 (424)
T 1sqd_A           25 RFHHIEFWCGDATNVARRFSWGLGMRFSAKSDLSTGNMVHASYLLTSG----DLRFLFTAPYSPSLSAGEIKPTTTASIP  100 (424)
T ss_dssp             EEEEEEEECSCHHHHHHHHHHHHTCEEEEEESGGGTCSSEEEEEEEET----TEEEEEEEECCGGGTTTCCGGGCCCSST
T ss_pred             eEEEEEEEECCHHHHHHHHHHcCCCEEEEEEcCCCCceeEEEEEEcCC----CEEEEEecCCCCcccccccccccccccc
Confidence            5899999999999999999999999987664322  112344445432    3556665542110               


Q ss_pred             ----e------eccCceeeEEEEEecChHHHHHHHHHHHHhhCCeeeecccccCCCCceEEEEECCCCCeEEEEechhhh
Q 022831          216 ----E------YTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNEDFL  285 (291)
Q Consensus       216 ----~------~~~~~g~~hia~~v~di~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~~~~  285 (291)
                          .      ...++|+.|++|.|+|++++++++    +++|+++..+|....+ ..+...+++|+|+.++|+++....
T Consensus       101 ~~~~~~~~~~~~~~g~gv~~iAf~VdDvdaa~~~l----~a~Ga~~~~~P~~~~~-~~~~~~i~~~Gg~~~~lvd~~g~~  175 (424)
T 1sqd_A          101 SFDHGSCRSFFSSHGLGVRAVAIEVEDAESAFSIS----VANGAIPSSPPIVLNE-AVTIAEVKLYGDVVLRYVSYKAED  175 (424)
T ss_dssp             TCCHHHHHHHHHHHCSEEEEEEEEESCHHHHHHHH----HHTTCCEEEEEEEETT-TEEEEEEEEETTEEEEEEEECCC-
T ss_pred             cccchHHHHHHHhcCCeEEEEEEEeCCHHHHHHHH----HHcCCEEeecCcCCCC-ceEEEEEEcCCCcEEEEEecCCCC
Confidence                0      112468999999999999999999    9999999988865433 356778889999999999876553

>1cjx_A 4-hydroxyphenylpyruvate dioxygenase; oxidoreductase, iron; 2.40A {Pseudomonas fluorescens} SCOP: d.32.1.3 d.32.1.3

Probab=99.24  E-value=5.1e-11  Score=103.43  Aligned_cols=128  Identities=13%  Similarity=0.128  Sum_probs=85.7

Q ss_pred             CCccceeeEEEEeC--CHHHHHHHHHHhcCCEEEEEeccCC--CceeeEEeeccCCCcceEEEeeec-CCC-Cc------
Q 022831           19 KDKRRLLHAVYRVG--DLDRTIKYYTECFGMELLRKRDVPE--EKYSNAFLGFGPEQSYFVVELTYN-YGV-TS------   86 (291)
Q Consensus        19 ~~~~~i~hv~l~v~--d~~~~~~FY~~~lG~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~l~l~~~-~~~-~~------   86 (291)
                      ..+.+|+|+++.|+  |++++.+||+++|||++......+.  .+.....+....  ....+++..+ ... ..      
T Consensus       154 ~~i~~idHv~l~V~~~dl~~a~~FY~~vLGf~~~~~~~~~~~~~~~~~~~~~~~~--g~~~i~L~~~~~~~~~~~~~~~~  231 (357)
T 1cjx_A          154 AGLKVIDHLTHNVYRGRMVYWANFYEKLFNFREARYFDIKGEYTGLTSKAMSAPD--GMIRIPLNEESSKGAGQIEEFLM  231 (357)
T ss_dssp             TSEEEEEEECEECCTTHHHHHHHHHHHHHCCEEEEEEEEECSSCEEEEEEEECTT--SSCEEEEEEECTTCCSHHHHHHH
T ss_pred             CCeeEECceEEeechhhHHHHHHHHHHhhCCceeeEEEeccCCcceEEEEEECCC--CCEEEEEeeecCCCCChHHHhHH
Confidence            57899999999999  9999999999999999976543222  111112222222  2345666554 221 11      


Q ss_pred             ccCCCCceEEEEEECCHHHHHHHHHHcCCeeee-CCc---------cCCCCce-------EEEEEEC----CCCcEEEEE
Q 022831           87 YDIGTGFGHLAIATEDVYKMVENIRAKGGNVTR-EPG---------PLKGMTT-------HFAFVKD----PDGYIFELI  145 (291)
Q Consensus        87 ~~~g~~~~~i~~~v~d~~~~~~~l~~~G~~~~~-~~~---------~~~~g~~-------~~~~~~d----P~G~~iel~  145 (291)
                      ...+.|++||||.|+|+++++++|+++|+++.. .|.         ....+..       .+++.+|    |+|++++|+
T Consensus       232 ~~~g~g~~HiAf~v~Di~~~~~~L~~~Gv~~~~~~p~~Yy~~l~~r~~~~~~~~~~l~~~~il~d~d~~~~~~g~llqif  311 (357)
T 1cjx_A          232 QFNGEGIQHVAFLTDDLVKTWDALKKIGMRFMTAPPDTYYEMLEGRLPDHGEPVDQLQARGILLDGSSVEGDKRLLLQIF  311 (357)
T ss_dssp             HHTSSBCCEEEEEESCHHHHHHHHHHTTCCBCCCCCHHHHHTHHHHSTTCCCCHHHHHHHTCEEEEEEETTEEEEEEEEE
T ss_pred             hcCCCCeeEEEEEcCCHHHHHHHHHHcCCcccCCCChHHHHHHHHHhccccccHHHHHHcCeEEecCCCCCCCCeEEEEe
Confidence            124568999999999999999999999999876 441         0111111       1255677    888888888


Q ss_pred             ecC
Q 022831          146 QRG  148 (291)
Q Consensus       146 ~~~  148 (291)
                      ..+
T Consensus       312 t~~  314 (357)
T 1cjx_A          312 SET  314 (357)
T ss_dssp             BCC
T ss_pred             ccC
Confidence            654

>3oms_A PHNB protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, methyltransferase, GL family; 1.90A {Bacillus cereus} SCOP: d.32.1.0

Probab=99.19  E-value=3e-10  Score=84.56  Aligned_cols=114  Identities=16%  Similarity=0.137  Sum_probs=75.3

Q ss_pred             eeeeeC-CchhhHHHHHHhcC-Ceeeee--cc----CcccceeeeeeccCCCCcceEEEEeEecCceeeccCceeeEEEE
Q 022831          157 VMLRVG-DLGRSIKFYEKALG-MKLLRT--ID----SPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAI  228 (291)
Q Consensus       157 v~l~v~-D~~~~~~Fy~~~lG-~~~~~~--~~----~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~~hia~  228 (291)
                      ..|.++ |.+++.+||+++|| .++...  +.    ..++......+..+    ...|.+....+......+++ ..++|
T Consensus        13 P~L~f~g~a~eA~~FY~~vFg~~~i~~~~~~~~~~~~~~g~v~ha~l~i~----g~~lm~~d~~~~~~~~~~~~-~~l~l   87 (138)
T 3oms_A           13 TFLMFEGKAEEAMNFYTSLFDQSEIVSISRYDENGPGKEGTVIHATFTLN----GQEFMCIDSYVNHNFTFTPA-MSLYV   87 (138)
T ss_dssp             EEEEESSCHHHHHHHHHTTSTTCCEEEEEECCTTCSSCTTSEEEEEEEET----TEEEEEEECSSCCSCCCCTT-SCEEE
T ss_pred             EEEEECCCHHHHHHHHHHHcCCceEEEEEecCCCCCCCCCcEEEEEEEEC----CEEEEEEcCCCCCCCCCCCC-EEEEE
Confidence            346666 89999999999999 565432  21    12233333334332    23333332211111122233 57999


Q ss_pred             EecC---hHHHHHHHHHHHHhhCCeeeecccccCCCCceEEEEECCCCCeEEEEec
Q 022831          229 STDD---VYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDN  281 (291)
Q Consensus       229 ~v~d---i~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iel~~~  281 (291)
                      .|+|   +++++++|    . .|+++..+|...++ +.++.+++||+|+.|+|..+
T Consensus        88 ~~~d~~evd~~~~~l----~-~Gg~v~~p~~~~~w-g~~~~~~~Dp~G~~W~i~~~  137 (138)
T 3oms_A           88 TCETEEEIDTVFHKL----A-QDGAILMPLGSYPF-SKKFGWLNDKYGVSWQLTLA  137 (138)
T ss_dssp             EESSHHHHHHHHHHH----H-TTCEEEEEEEEETT-EEEEEEEECTTSCEEEEEEC
T ss_pred             EcCCHHHHHHHHHHH----H-cCCeEecCcccccC-CcEEEEEECCCCCEEEEEeC
Confidence            9999   88888888    6 48899999998887 56899999999999999764

>1tsj_A Conserved hypothetical protein; structural genomics, protein structure initiative, PSI, nysgxrc; 2.60A {Staphylococcus aureus subsp} SCOP: d.32.1.7

Probab=99.19  E-value=3.4e-10  Score=84.47  Aligned_cols=114  Identities=10%  Similarity=0.082  Sum_probs=72.7

Q ss_pred             ceeeeeeeCCchhhHHHHHHhc-CCeeeeeccCc------ccceeeeeeccCCCCcceEEEEeEecCceeeccCceeeEE
Q 022831          154 LCQVMLRVGDLGRSIKFYEKAL-GMKLLRTIDSP------ELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQV  226 (291)
Q Consensus       154 ~~hv~l~v~D~~~~~~Fy~~~l-G~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~~hi  226 (291)
                      +....+.+.|.+++.+||+++| |+++.......      ++.+....+..++    ..+.+... . ...  +.. ..+
T Consensus         6 i~p~l~~~~d~~eA~~FY~~~f~G~~~~~~~~~~~~~~~~~~~v~ha~l~~~~----~~~m~~d~-~-~~~--~~~-~sl   76 (139)
T 1tsj_A            6 ITTFLMFNNQAEEAVKLYTSLFEDSEIITMAKYGENGPGDPGTVQHSIFTLNG----QVFMAIDA-N-SGT--ELP-ISL   76 (139)
T ss_dssp             EEEEEECSSCHHHHHHHHHHHSSSCEEEEEEECC-----CTTSEEEEEEEETT----EEEEEEC-----------C-CCE
T ss_pred             eeEEEEECCCHHHHHHHHHHHcCCCEEEEEEecCcCCCCCCCcEEEEEEEECC----EEEEEECC-C-CCC--Cce-EEE
Confidence            3433344459999999999999 99986432111      1222222233221    11211111 0 011  112 578


Q ss_pred             EEEecC---hHHHHHHHHHHHHhhCCeeeecccccCCCCceEEEEECCCCCeEEEEech
Q 022831          227 AISTDD---VYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNE  282 (291)
Q Consensus       227 a~~v~d---i~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~  282 (291)
                      ++.|+|   +++++++|    . .|+++..+|...++ |.++.+++||+|+.|+|..+.
T Consensus        77 ~~~~~d~~evd~~~~~l----~-~G~~v~~p~~~~~w-G~~~g~v~Dp~G~~W~i~~~~  129 (139)
T 1tsj_A           77 FVTVKDTIEMERLFNGL----K-DEGAILMPKTNMPP-YREFAWVQDKFGVSFQLALPE  129 (139)
T ss_dssp             EEECSSHHHHHHHHHHH----H-TTCEEEEEEEEETT-EEEEEEEECTTSCEEEEEECC
T ss_pred             EEECCCHHHHHHHHHHH----h-CCCEEeecccccCC-CceEEEEECCCCCEEEEeecc
Confidence            899987   67777777    7 69999999998887 579999999999999999753

>3l20_A Putative uncharacterized protein; hypothetical protein, unknown function; 2.45A {Staphylococcus aureus}

Probab=99.17  E-value=2.2e-09  Score=82.60  Aligned_cols=123  Identities=17%  Similarity=0.129  Sum_probs=84.3

Q ss_pred             CCccceeeEEEEeCCHHHHHHHHHHhcCCEEEEEeccC--------------CCceeeEEeeccCCCcceEEEeeecCCC
Q 022831           19 KDKRRLLHAVYRVGDLDRTIKYYTECFGMELLRKRDVP--------------EEKYSNAFLGFGPEQSYFVVELTYNYGV   84 (291)
Q Consensus        19 ~~~~~i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~l~l~~~~~~   84 (291)
                      ||++.-....|.+.|.+++.+||+++||+++.......              ++....+.+.++  +..  |.+....+.
T Consensus        21 ~mmm~~i~PyL~f~~a~eAi~FY~~vFG~~~~~~~~~~d~p~~~~~~~~~~~~g~v~hael~i~--g~~--lm~~D~~g~   96 (172)
T 3l20_A           21 MFYMTALFPYIAFENSKEALAYYEEVFGATDVKRLEVGEEQASHFGMTKEEAQEATMHAEFEVL--GVK--VLCSDSFGR   96 (172)
T ss_dssp             CCCCCEEEEEEEESCHHHHHHHHHHHSCCEEEEEEECCTTTTTTTTCCHHHHHTCEEEEEEEET--TEE--EEEEECTTC
T ss_pred             eEecCcEEEEEEECCHHHHHHHHHHHcCCEEEEEEEcccCCcccccCCcccCCCcEEEEEEEEC--CEE--EEEECCCCC
Confidence            34443345666677999999999999999987543221              234455666654  222  333332121


Q ss_pred             CcccCCCCceEEEEEE--------CCHHHHHHHHHHcC-CeeeeCCccCCCCceEEEEEECCCCcEEEEEecC
Q 022831           85 TSYDIGTGFGHLAIAT--------EDVYKMVENIRAKG-GNVTREPGPLKGMTTHFAFVKDPDGYIFELIQRG  148 (291)
Q Consensus        85 ~~~~~g~~~~~i~~~v--------~d~~~~~~~l~~~G-~~~~~~~~~~~~g~~~~~~~~dP~G~~iel~~~~  148 (291)
                       .+..+++ ..+++.+        +|+++++++|.+.| +++..++.+.+||.+. .+++||+|+.|.|....
T Consensus        97 -~~~~~~~-~sl~l~~~~~d~~~~~dvd~~~~~l~~~G~a~v~~p~~~~~wG~r~-g~v~DpfG~~W~i~~~~  166 (172)
T 3l20_A           97 -ADKINNG-ISLLIDYDVNNKEDADKVEAFYEQIKDHSSIEIELPFADQFWGGKM-GVFTDKYGVRWMLHGQD  166 (172)
T ss_dssp             -CCCCCSS-EEEEEEEETTCHHHHHHHHHHHHHHTTCTTCEEEEEEEECTTSSEE-EEEECTTSCEEEEEEEC
T ss_pred             -CCCCCCc-EEEEEEEccCccCcHHHHHHHHHHHHhCCCceEecCccccCCCcEE-EEEECCCCCEEEEEeCC
Confidence             2222323 3566766        57899999999999 7999999999998764 78999999999998654

>3isq_A 4-hydroxyphenylpyruvate dioxygenase; tyrosine metabolism, DIS mutation, iron, mental retardation, metal-binding, oxidored phenylalanine catabolism; 1.75A {Homo sapiens} PDB: 1sqi_A*

Probab=99.12  E-value=3.9e-10  Score=98.31  Aligned_cols=125  Identities=18%  Similarity=0.213  Sum_probs=91.6

Q ss_pred             CCceeeeeeeCCchhhHHHHHHhcCCeeeeeccCcccc--eeeeeeccCCCCcceEEEEeEecCce--e-----eccCce
Q 022831          152 EPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELK--CALAMLGYAEEDQTTVLELAYSYGVT--E-----YTKGNA  222 (291)
Q Consensus       152 ~~~~hv~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~l~~~~~~~--~-----~~~~~g  222 (291)
                      .+++||.+.|+|++++.+||++.|||++......+.+.  ....++..+    ...++|..+....  +     ...++|
T Consensus        10 ~~i~Hv~i~V~d~~~a~~fY~~~LGf~~v~~~~~e~g~r~~~~~~l~~G----~i~~~L~~p~~p~s~~~a~fl~~hG~G   85 (393)
T 3isq_A           10 LHFHSVTFWVGNAKQAASFYCSKMGFEPLAYRGLETGSREVVSHVIKQG----KIVFVLSSALNPWNKEMGDHLVKHGDG   85 (393)
T ss_dssp             EEEEEEEEECSCHHHHHHHHHHHHCCEEEEEESGGGTCCSEEEEEEEET----TEEEEEEEESSTTCHHHHHHHHHHCSE
T ss_pred             ceEeEEEEEECCHHHHHHHHHHhcCCEEEEEEcCCCCcEEEEEEEEecC----CEEEEEecCCCCCchHHHHHHHhcCCc
Confidence            35899999999999999999999999988754322121  223444433    3566665532211  1     113679


Q ss_pred             eeEEEEEecChHHHHHHHHHHHHhhCCeeeecccccCC--CCceEEEEECCCCCeEEEEechhh
Q 022831          223 YAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPG--LNTKITSFVDPDGWKTVLVDNEDF  284 (291)
Q Consensus       223 ~~hia~~v~di~~~~~~l~~~~~~~G~~~~~~p~~~~~--~~~~~~~~~DPdG~~iel~~~~~~  284 (291)
                      +.|++|.|+|++++++++    +++|++++.+|...+.  +..++..+++|+|..+.|+++..+
T Consensus        86 v~~iAf~VdDvdaa~~ra----~a~Ga~~v~eP~~~~~~~G~v~~a~I~~~Gd~~h~lVdr~~y  145 (393)
T 3isq_A           86 VKDIAFEVEDCDYIVQKA----RERGAKIMREPWVEQDKFGKVKFAVLQTYGDTTHTLVEKMNY  145 (393)
T ss_dssp             EEEEEEEEECHHHHHHHH----HHHTCCEEEEEEEEEETTEEEEEEEEECSTTCEEEEEEEESC
T ss_pred             EEEEEEEeCCHHHHHHHH----HHCCCeEecCccccccCCceeEEEEEEeCCCcEEEEeccccC
Confidence            999999999999999999    9999999998865422  124678899999999999997544

>1sp8_A 4-hydroxyphenylpyruvate dioxygenase; oxidoreductase; 2.00A {Zea mays} SCOP: d.32.1.3 d.32.1.3

Probab=99.12  E-value=3.9e-10  Score=99.55  Aligned_cols=124  Identities=15%  Similarity=0.083  Sum_probs=90.3

Q ss_pred             CCceeeeeeeCCchhhHHHHHHhcCCeeeeeccCcc--cceeeeeeccCCCCcceEEEEeEecCc--------------e
Q 022831          152 EPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPE--LKCALAMLGYAEEDQTTVLELAYSYGV--------------T  215 (291)
Q Consensus       152 ~~~~hv~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~l~l~~~~~~--------------~  215 (291)
                      .++.||.|.|+|++++.+||++.|||++..+...+.  .....+++..+    ...|+|......              .
T Consensus        30 ~~l~hV~i~V~Dle~a~~fY~~~LGf~~~~~~~~~~G~~~~~~~~~~~G----~~~l~L~~~~~~~~~~~~~p~~~~~~~  105 (418)
T 1sp8_A           30 LAFHHVELWCADAASAAGRFSFGLGAPLAARSDLSTGNSAHASLLLRSG----SLSFLFTAPYAHGADAATAALPSFSAA  105 (418)
T ss_dssp             EEEEEEEEECSCHHHHHHHHHHHHTCCEEEEESGGGTCCSEEEEEEEET----TEEEEEEEECCSSCCGGGCSSTTCCHH
T ss_pred             ceEEEEEEEeCCHHHHHHHHHHhCCCEEEEEEcCCCCCcceEEEEEeeC----CEEEEEecCCCCcccccccccccccch
Confidence            458999999999999999999999999876643221  12344555533    355666554221              0


Q ss_pred             e-----eccCceeeEEEEEecChHHHHHHHHHHHHhhCCeeeecccccCCCCceEEEEECCCCCeEEEEechhh
Q 022831          216 E-----YTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNEDF  284 (291)
Q Consensus       216 ~-----~~~~~g~~hia~~v~di~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~~~  284 (291)
                      .     ...++|+.|++|.|+|++++++++    +++|+++...|....+ ..+...+++|+|..++|+++...
T Consensus       106 ~~~~~~~~hg~gv~~iAf~V~Dv~~a~~~l----~~~Ga~~~~~p~~~~~-~~~~~~i~~~Gg~~~~lvd~~~~  174 (418)
T 1sp8_A          106 AARRFAADHGLAVRAVALRVADAEDAFRAS----VAAGARPAFGPVDLGR-GFRLAEVELYGDVVLRYVSYPDG  174 (418)
T ss_dssp             HHHHHHHHHSSEEEEEEEEESCHHHHHHHH----HTTTCCEEEEEEEEET-TEEEEEEEEETTEEEEEEECCTT
T ss_pred             hHHHHHhhcCCeeEEEEEEeCCHHHHHHHH----HHCCCEEEeccccccC-ceEEEEEecCCCEEEEEEccCCC
Confidence            0     113479999999999999999999    9999999988864322 24567778899999999987643

>3l20_A Putative uncharacterized protein; hypothetical protein, unknown function; 2.45A {Staphylococcus aureus}

Probab=99.11  E-value=1.3e-09  Score=83.87  Aligned_cols=115  Identities=15%  Similarity=0.141  Sum_probs=77.3

Q ss_pred             eeeeeCCchhhHHHHHHhcCCeeeeeccCc--------------ccceeeeeeccCCCCcceEEEEeEecCceeeccCce
Q 022831          157 VMLRVGDLGRSIKFYEKALGMKLLRTIDSP--------------ELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNA  222 (291)
Q Consensus       157 v~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g  222 (291)
                      ..|.+.|.+++.+||+++||+++.......              ++......+..+    ...|.+....+. ....+++
T Consensus        29 PyL~f~~a~eAi~FY~~vFG~~~~~~~~~~d~p~~~~~~~~~~~~g~v~hael~i~----g~~lm~~D~~g~-~~~~~~~  103 (172)
T 3l20_A           29 PYIAFENSKEALAYYEEVFGATDVKRLEVGEEQASHFGMTKEEAQEATMHAEFEVL----GVKVLCSDSFGR-ADKINNG  103 (172)
T ss_dssp             EEEEESCHHHHHHHHHHHSCCEEEEEEECCTTTTTTTTCCHHHHHTCEEEEEEEET----TEEEEEEECTTC-CCCCCSS
T ss_pred             EEEEECCHHHHHHHHHHHcCCEEEEEEEcccCCcccccCCcccCCCcEEEEEEEEC----CEEEEEECCCCC-CCCCCCc
Confidence            447777999999999999999976543221              122333334332    233444332221 1222333


Q ss_pred             eeEEEEEe--------cChHHHHHHHHHHHHhhC-CeeeecccccCCCCceEEEEECCCCCeEEEEech
Q 022831          223 YAQVAIST--------DDVYKSAEVVNLVTQELG-GKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNE  282 (291)
Q Consensus       223 ~~hia~~v--------~di~~~~~~l~~~~~~~G-~~~~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~  282 (291)
                       ..+++.+        +|++++++++    .+.| +++..+|...++ +.++++++||+|+.|+|...+
T Consensus       104 -~sl~l~~~~~d~~~~~dvd~~~~~l----~~~G~a~v~~p~~~~~w-G~r~g~v~DpfG~~W~i~~~~  166 (172)
T 3l20_A          104 -ISLLIDYDVNNKEDADKVEAFYEQI----KDHSSIEIELPFADQFW-GGKMGVFTDKYGVRWMLHGQD  166 (172)
T ss_dssp             -EEEEEEEETTCHHHHHHHHHHHHHH----TTCTTCEEEEEEEECTT-SSEEEEEECTTSCEEEEEEEC
T ss_pred             -EEEEEEEccCccCcHHHHHHHHHHH----HhCCCceEecCccccCC-CcEEEEEECCCCCEEEEEeCC
Confidence             3455555        5789999999    9999 699999988886 568999999999999998753

>3oms_A PHNB protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, methyltransferase, GL family; 1.90A {Bacillus cereus} SCOP: d.32.1.0

Probab=99.10  E-value=3.9e-09  Score=78.50  Aligned_cols=114  Identities=13%  Similarity=0.195  Sum_probs=78.3

Q ss_pred             EEEEeC-CHHHHHHHHHHhcC-CEEEEEec------cCCCceeeEEeeccCCCcceEEEeeecCCCCcccCCCCceEEEE
Q 022831           27 AVYRVG-DLDRTIKYYTECFG-MELLRKRD------VPEEKYSNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHLAI   98 (291)
Q Consensus        27 v~l~v~-d~~~~~~FY~~~lG-~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~g~~~~~i~~   98 (291)
                      ..|.+. |.+++.+||+++|| .++.....      ..++...++.+.++  +..  +.+....+...+..+ ....+++
T Consensus        13 P~L~f~g~a~eA~~FY~~vFg~~~i~~~~~~~~~~~~~~g~v~ha~l~i~--g~~--lm~~d~~~~~~~~~~-~~~~l~l   87 (138)
T 3oms_A           13 TFLMFEGKAEEAMNFYTSLFDQSEIVSISRYDENGPGKEGTVIHATFTLN--GQE--FMCIDSYVNHNFTFT-PAMSLYV   87 (138)
T ss_dssp             EEEEESSCHHHHHHHHHTTSTTCCEEEEEECCTTCSSCTTSEEEEEEEET--TEE--EEEEECSSCCSCCCC-TTSCEEE
T ss_pred             EEEEECCCHHHHHHHHHHHcCCceEEEEEecCCCCCCCCCcEEEEEEEEC--CEE--EEEEcCCCCCCCCCC-CCEEEEE
Confidence            445566 89999999999999 66653211      12345556666654  222  323322111122222 2357899


Q ss_pred             EECC---HHHHHHHHHHcCCeeeeCCccCCCCceEEEEEECCCCcEEEEEec
Q 022831           99 ATED---VYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFELIQR  147 (291)
Q Consensus        99 ~v~d---~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dP~G~~iel~~~  147 (291)
                      .|+|   +++++++|. .|.++..++.+.++|.+ +.+++||+|+.|.|...
T Consensus        88 ~~~d~~evd~~~~~l~-~Gg~v~~p~~~~~wg~~-~~~~~Dp~G~~W~i~~~  137 (138)
T 3oms_A           88 TCETEEEIDTVFHKLA-QDGAILMPLGSYPFSKK-FGWLNDKYGVSWQLTLA  137 (138)
T ss_dssp             EESSHHHHHHHHHHHH-TTCEEEEEEEEETTEEE-EEEEECTTSCEEEEEEC
T ss_pred             EcCCHHHHHHHHHHHH-cCCeEecCcccccCCcE-EEEEECCCCCEEEEEeC
Confidence            9999   999999995 68899999999999865 48899999999998753

>3e0r_A C3-degrading proteinase (CPPA protein); MCSG, PSI, SAD, structural GE protein structure initiative; 2.30A {Streptococcus pneumoniae}

Probab=98.86  E-value=2.7e-08  Score=79.50  Aligned_cols=116  Identities=17%  Similarity=0.186  Sum_probs=76.3

Q ss_pred             ceeeeeeeCCchhhHHHHHHhcCCeeeeeccCcccceeeeeeccCCCCcceEEEEeEecCceeeccCceeeEE---EEEe
Q 022831          154 LCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQV---AIST  230 (291)
Q Consensus       154 ~~hv~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~~hi---a~~v  230 (291)
                      ....+|+|+|.+++.+||+++|||++.....      ....++....  ...|.+-+++.... ....|+-|+   ++.|
T Consensus        11 ~~~p~LrV~nr~~~~~FY~~vlG~kll~ee~------~~a~lg~~~~--~~~L~lEEsp~~~~-~~~~Glkh~a~i~i~v   81 (244)
T 3e0r_A           11 RIIPTLKANNRKLNETFYIETLGMKALLEES------AFLSLGDQTG--LEKLVLEEAPSMRT-RKVEGRKKLARLIVKV   81 (244)
T ss_dssp             EEEEEEEESSHHHHHHHHTTTTCCEEEEECS------SEEEEECTTC--CEEEEEEECCTTTC-BCCCSSCSEEEEEEEE
T ss_pred             EEeeEEEECCHHHHHHHHHhccCcEEeeccC------cEEEeecCCC--cceEEEEeCCCccc-ccccccceeeeEEEEc
Confidence            4567799999999999999999999876532      3445553332  23444544332211 234577777   5999


Q ss_pred             cChHHHHHHHHHHHHhhCCeeeecccccCCCCceEEEEECCCCCeEEEEechhhhh
Q 022831          231 DDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNEDFLK  286 (291)
Q Consensus       231 ~di~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~~~~~  286 (291)
                      +|..++..-|    .. +.++.. ++  .+..++.+|+.||+||.|||+...|...
T Consensus        82 p~~~el~~lL----~~-~~~~~~-~~--~gdhgyA~yl~dPEGn~ieiyae~d~~~  129 (244)
T 3e0r_A           82 ENPLEIEGIL----SK-TDSIHR-LY--KGQNGYAFEIFSPEDDLILIHAEDDIAS  129 (244)
T ss_dssp             SSHHHHHHHH----TT-CSCCSE-EE--ECSSSEEEEEECTTCCEEEEECCSCGGG
T ss_pred             CCHHHHHHHH----hc-cccccc-cc--ccCCcEEEEEECCCCCeEEEEEcCCHHH
Confidence            9977777766    33 544321 11  1223567999999999999999776543

>3p8a_A Uncharacterized protein; mainly antiparallel beta sheets, alpha and beta protein, UNK function; HET: MSE BTB PG4; 1.95A {Staphylococcus aureus}

Probab=98.68  E-value=7.2e-07  Score=73.70  Aligned_cols=159  Identities=13%  Similarity=0.111  Sum_probs=101.7

Q ss_pred             hhccCCcCCccceeeEEEEeCCHHHHHHHHHHhcC-----CEEEEEeccCCCceeeEEeeccCCCcceEEEeeecCCC--
Q 022831           12 ELLEWPKKDKRRLLHAVYRVGDLDRTIKYYTECFG-----MELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGV--   84 (291)
Q Consensus        12 ~~~~~~~~~~~~i~hv~l~v~d~~~~~~FY~~~lG-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~--   84 (291)
                      ++..+-..|+.+|+|+.+.|++++        .||     |++.....-+..+.....+.++    ..+||+....+.  
T Consensus        13 ~~~~~~~~M~~~lDHlVi~v~~l~--------~lG~~~~~f~~~~GG~H~~~GT~N~Li~fd----g~YLElIai~~~~~   80 (274)
T 3p8a_A           13 GLVPRGSHMILKFDHIIHYIDQLD--------RFSFPGDVIKLHSGGYHHKYGTFNKLGYIN----ENYIELLDVENNEK   80 (274)
T ss_dssp             --------CCCEEEEEEEECTTGG--------GCCCGGGSSCCEEEEEETTTTEEEEEEECS----SSEEEEEEESCHHH
T ss_pred             ccccCCcCccccCCEEEEEeccHH--------HcCCccceEEeCCCccCCCCCCEEEEEeeC----CEEEEEEeecCccc
Confidence            344444468999999999999884        467     9988766555555566666663    246777653221  


Q ss_pred             ---------C--cc-------cCCCCceEEEEEECCHHHHHHHHHHcCCeeeeC---CccCCCCc---eEEEEEECCC--
Q 022831           85 ---------T--SY-------DIGTGFGHLAIATEDVYKMVENIRAKGGNVTRE---PGPLKGMT---THFAFVKDPD--  138 (291)
Q Consensus        85 ---------~--~~-------~~g~~~~~i~~~v~d~~~~~~~l~~~G~~~~~~---~~~~~~g~---~~~~~~~dP~--  138 (291)
                               .  .+       ..|.|+.+++++++|+++..++|.++|+.+..+   ....++|.   ..+++..|+.  
T Consensus        81 ~~~~~~~~~~~~~f~~~~~~~~~geGl~~~alrt~Di~a~~a~l~~~Gl~~~~p~~~sR~~pDG~~l~W~l~~~~d~~~~  160 (274)
T 3p8a_A           81 LKKMAKTIEGGVAFATQIVQEKYEQGFKNICLHTNDIEAVKNKLQSEQVEVVGPIQMERDTHKDGKVKWQLLYIMNQDDD  160 (274)
T ss_dssp             HHHHTTSTGGGTCTTTHHHHTTTCCEEEEEEEECSCHHHHHHHHHTTTCEEEEEEEEEECCCC--CEEEEEEEEECSSCC
T ss_pred             ccccccccCccchHHHHhhhhccCCCeEEEEEecCCHHHHHHHHHHcCCCcCCCccccccCCCCCEEEEEEEeccCCCcc
Confidence                     1  11       246799999999999999999999999874321   12234553   2334456654  


Q ss_pred             CcEE-EEEecC-C----------CC---CCceeeeeeeCCchhhHHHHHHhcCCeeeee
Q 022831          139 GYIF-ELIQRG-P----------TP---EPLCQVMLRVGDLGRSIKFYEKALGMKLLRT  182 (291)
Q Consensus       139 G~~i-el~~~~-~----------~~---~~~~hv~l~v~D~~~~~~Fy~~~lG~~~~~~  182 (291)
                      +..+ -+++.. +          ++   ..|.++.+.+.|++++.+.|.++||......
T Consensus       161 ~~~~PFfiqw~~~~~~r~~~~~~HpnGa~gI~~vvi~~~dp~~~~~~~~~l~g~~~~~~  219 (274)
T 3p8a_A          161 EIKPPFFIQWEESDSMRTKKLQKYFQKQFSIETVIVKSKNRSQTVSNWLKWFDMDIVEE  219 (274)
T ss_dssp             SSCCCEEEEESSCTTHHHHHHTTTCCTTEEEEEEEEEETTHHHHHHHHHHHHCCEEEEE
T ss_pred             CCCccEEEecCCCccccccccccCCCccceEEEEEEEeCCHHHHHHHHHHHhCCCcccc
Confidence            2211 223321 1          22   3489999999999999999999999997654

>1u69_A Hypothetical protein; structural genomics, MSCG, pseudomonas aeruginosa PAO1, HYPO protein, protein structure initiative (PSI); 1.60A {Pseudomonas aeruginosa} SCOP: d.32.1.7

Probab=98.31  E-value=8.7e-06  Score=61.77  Aligned_cols=131  Identities=14%  Similarity=0.160  Sum_probs=86.8

Q ss_pred             EEEEeC-CHHHHHHHHHHhc-CCEEEEEecc-------CCCceeeEEeeccCCCcceEEEeeecCCCCcccCCCCceEEE
Q 022831           27 AVYRVG-DLDRTIKYYTECF-GMELLRKRDV-------PEEKYSNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHLA   97 (291)
Q Consensus        27 v~l~v~-d~~~~~~FY~~~l-G~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~g~~~~~i~   97 (291)
                      ..|... |.+++.+||+++| |.++......       +++...++.+.++.  ..+.+  ... .+ .+... ....++
T Consensus         9 PyL~f~g~a~eAi~FY~~vF~ga~i~~~~~~~~~~~~~~~g~Vmhael~i~g--~~~m~--~d~-~p-~~~~~-~~~sl~   81 (163)
T 1u69_A            9 ICLWYDSAALEAATFYAETFPDSAVLAVHRAPGDYPSGKEGDVLTVEFRVMG--IPCLG--LNG-GP-AFRHS-EAFSFQ   81 (163)
T ss_dssp             EEEEESSCHHHHHHHHHHHSTTEEEEEEEECSSCBTTBCTTSEEEEEEEETT--EEEEE--EEC-CT-TCCCC-TTEEEE
T ss_pred             EEEEECCCHHHHHHHHHHHhCCCEEeEEEeccCCCCCCCCCeEEEEEEEECC--EEEEE--ECC-CC-CcCCC-CceEEE
Confidence            345555 9999999999999 9998743211       13455566666642  22222  221 11 22222 224788


Q ss_pred             EEECC---HHHHHHHHHHcCCeeeeCCccCCCCceEEEEEECCCCcEEEEEecCCCCCCceeeeeeeCCchhhHHHHHHh
Q 022831           98 IATED---VYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFELIQRGPTPEPLCQVMLRVGDLGRSIKFYEKA  174 (291)
Q Consensus        98 ~~v~d---~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dP~G~~iel~~~~~~~~~~~hv~l~v~D~~~~~~Fy~~~  174 (291)
                      +.++|   +++++++|.+.|.++.      .     +.+++||.|+.|.|....      ..-.+.-.|.+++.+.+...
T Consensus        82 v~~~d~~e~d~~~~~L~~~Gg~v~------~-----~G~v~D~fGv~W~i~~~~------~~~~~~d~d~~~~~r~~~am  144 (163)
T 1u69_A           82 VATDDQAETDRLWNAIVDNGGEES------A-----CGWCRDKWGISWQITPRV------LSEAIASPDRAAARRAFEAM  144 (163)
T ss_dssp             EEESSHHHHHHHHHHHHHTTCEEC------S-----TTEEECTTSCEEEEEEHH------HHHHHTCSSHHHHHHHHHHH
T ss_pred             EEeCCHHHHHHHHHHHHhCCCEEE------E-----EEEEECCCCCEEEEEeEc------hHHhccCCCHHHHHHHHHHH
Confidence            99988   6777889988898875      1     136899999999988421      11224457899999999999


Q ss_pred             cCCeeee
Q 022831          175 LGMKLLR  181 (291)
Q Consensus       175 lG~~~~~  181 (291)
                      |+++..+
T Consensus       145 ~~m~k~d  151 (163)
T 1u69_A          145 MTMGRID  151 (163)
T ss_dssp             TTCSSCC
T ss_pred             HCCccee
Confidence            9998554

>1u69_A Hypothetical protein; structural genomics, MSCG, pseudomonas aeruginosa PAO1, HYPO protein, protein structure initiative (PSI); 1.60A {Pseudomonas aeruginosa} SCOP: d.32.1.7

Probab=98.08  E-value=3.6e-05  Score=58.40  Aligned_cols=103  Identities=13%  Similarity=0.044  Sum_probs=63.2

Q ss_pred             eeeeC-CchhhHHHHHHhc-CCeeeee--ccC----c-ccceeeeeeccCCCCcceEEEEeEecCceeeccCceeeEEEE
Q 022831          158 MLRVG-DLGRSIKFYEKAL-GMKLLRT--IDS----P-ELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAI  228 (291)
Q Consensus       158 ~l~v~-D~~~~~~Fy~~~l-G~~~~~~--~~~----~-~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~~hia~  228 (291)
                      .|..+ |.+++.+||+++| |.++...  +..    + ++......+..+    ...+.+....+  ..+..++ ..+.+
T Consensus        10 yL~f~g~a~eAi~FY~~vF~ga~i~~~~~~~~~~~~~~~g~Vmhael~i~----g~~~m~~d~~p--~~~~~~~-~sl~v   82 (163)
T 1u69_A           10 CLWYDSAALEAATFYAETFPDSAVLAVHRAPGDYPSGKEGDVLTVEFRVM----GIPCLGLNGGP--AFRHSEA-FSFQV   82 (163)
T ss_dssp             EEEESSCHHHHHHHHHHHSTTEEEEEEEECSSCBTTBCTTSEEEEEEEET----TEEEEEEECCT--TCCCCTT-EEEEE
T ss_pred             EEEECCCHHHHHHHHHHHhCCCEEeEEEeccCCCCCCCCCeEEEEEEEEC----CEEEEEECCCC--CcCCCCc-eEEEE
Confidence            36666 9999999999999 9887642  211    1 222333333332    12333322111  1112233 36778


Q ss_pred             EecC---hHHHHHHHHHHHHhhCCeeeecccccCCCCceEEEEECCCCCeEEEEech
Q 022831          229 STDD---VYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNE  282 (291)
Q Consensus       229 ~v~d---i~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~  282 (291)
                      .++|   +++++++|    .+.|+++.           ++.+++||.|+.|.|..+.
T Consensus        83 ~~~d~~e~d~~~~~L----~~~Gg~v~-----------~~G~v~D~fGv~W~i~~~~  124 (163)
T 1u69_A           83 ATDDQAETDRLWNAI----VDNGGEES-----------ACGWCRDKWGISWQITPRV  124 (163)
T ss_dssp             EESSHHHHHHHHHHH----HHTTCEEC-----------STTEEECTTSCEEEEEEHH
T ss_pred             EeCCHHHHHHHHHHH----HhCCCEEE-----------EEEEEECCCCCEEEEEeEc
Confidence            8887   66667777    77788876           3357999999999998753

>3opy_B 6-phosphofructo-1-kinase beta-subunit; ATP binding, fructose-6-phosphate bindi magnesium binding, citrate binding, ADP binding; HET: ATP; 3.05A {Pichia pastoris}

Probab=97.56  E-value=0.00037  Score=66.16  Aligned_cols=122  Identities=16%  Similarity=0.197  Sum_probs=76.6

Q ss_pred             CCccceeeEEEEeC---CHHHHHHHHHHhcCCEEEEEeccCCCceeeEEeeccCCCcceEEEeeec--CCC---------
Q 022831           19 KDKRRLLHAVYRVG---DLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYN--YGV---------   84 (291)
Q Consensus        19 ~~~~~i~hv~l~v~---d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~--~~~---------   84 (291)
                      ..+++...+.+.+.   .++++.+||++.|++......   +......++.  +......+++...  ...         
T Consensus         5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (941)
T 3opy_B            5 SLFNGTSFITLFAPNISLLQASIDFYTNFLGFAIRKNS---NQKLFWLQLE--EDQNNVSIQLILDPEHAASVSQIDQNI   79 (941)
T ss_dssp             CCSCEEEEEEEECCC-CC-HHHHHHHHHTTCCEECSSC---SCCC---EEC--CTTSCCEEEEECSSCSCHHHHHHHHHH
T ss_pred             ceecceeEEEEEeCCHHHHHHHHHHHHhhccceecccc---CCcceeEEEe--cCCCeEEEEEEeccccchhHHHHHHHH
Confidence            35678888888775   578999999999999775421   2111123332  2334444544322  110         


Q ss_pred             -------CcccCCCCceEEEEEECCHHHHHHHHHHcCCeeeeCCccCCCCceEEEEEECCCCcEEEEEecC
Q 022831           85 -------TSYDIGTGFGHLAIATEDVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFELIQRG  148 (291)
Q Consensus        85 -------~~~~~g~~~~~i~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dP~G~~iel~~~~  148 (291)
                             .......-..|++|.++|++++.+.|.+.+.++...|.+..  .. .+|+.||+||.|+|.+..
T Consensus        80 ~~~~~~~~~~dW~~~~~~l~f~~~dL~~~~~~L~~~~~~~Q~~ps~~~--~~-e~yt~DPlGNvIgfs~~~  147 (941)
T 3opy_B           80 RNLTRSLYRKDWRSIQSNIAFKSSSLSKLVKLLKDGGHPVQQSPNEIS--PF-EVYTVDPLGSLIGFSGFK  147 (941)
T ss_dssp             HCCC----------CCCEEEEEESCHHHHHHHHHTTTCCCBCSSSSCS--CE-EECCSSCCEEEECC-CCS
T ss_pred             hhhhcccccccccccCceEEEEeCCHHHHHHHHHhcCCccccCCCcCC--Cc-eEEeECCCCCEEEEeccC
Confidence                   00111112339999999999999999999998776655443  23 378899999999998776

>3opy_B 6-phosphofructo-1-kinase beta-subunit; ATP binding, fructose-6-phosphate bindi magnesium binding, citrate binding, ADP binding; HET: ATP; 3.05A {Pichia pastoris}

Probab=97.25  E-value=0.00063  Score=64.61  Aligned_cols=110  Identities=18%  Similarity=0.226  Sum_probs=67.4

Q ss_pred             CCchhhHHHHHHhcCCeeeeeccCcccceeeeeeccCCCCcceEEEEeEecCcee-----------e-------ccCcee
Q 022831          162 GDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTE-----------Y-------TKGNAY  223 (291)
Q Consensus       162 ~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~-----------~-------~~~~g~  223 (291)
                      .-+.++.+||++++++......   +.......+.  +.....++++........           .       ....--
T Consensus        21 ~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dW~~~~   95 (941)
T 3opy_B           21 SLLQASIDFYTNFLGFAIRKNS---NQKLFWLQLE--EDQNNVSIQLILDPEHAASVSQIDQNIRNLTRSLYRKDWRSIQ   95 (941)
T ss_dssp             CC-HHHHHHHHHTTCCEECSSC---SCCC---EEC--CTTSCCEEEEECSSCSCHHHHHHHHHHHCCC----------CC
T ss_pred             HHHHHHHHHHHhhccceecccc---CCcceeEEEe--cCCCeEEEEEEeccccchhHHHHHHHHhhhhcccccccccccC
Confidence            4588999999999999865422   2111122333  223345555543311100           0       000011


Q ss_pred             eEEEEEecChHHHHHHHHHHHHhhCCeeeecccccCCCCceEEEEECCCCCeEEEEechh
Q 022831          224 AQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNED  283 (291)
Q Consensus       224 ~hia~~v~di~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~~  283 (291)
                      .|+.|.+.|++++.+.|    .+.+..+..-|....   -..+|+.||+||.|+|.+.+-
T Consensus        96 ~~l~f~~~dL~~~~~~L----~~~~~~~Q~~ps~~~---~~e~yt~DPlGNvIgfs~~~~  148 (941)
T 3opy_B           96 SNIAFKSSSLSKLVKLL----KDGGHPVQQSPNEIS---PFEVYTVDPLGSLIGFSGFKN  148 (941)
T ss_dssp             CEEEEEESCHHHHHHHH----HTTTCCCBCSSSSCS---CEEECCSSCCEEEECC-CCSS
T ss_pred             ceEEEEeCCHHHHHHHH----HhcCCccccCCCcCC---CceEEeECCCCCEEEEeccCC
Confidence            39999999999999999    889987766555322   357889999999999998664

>3p8a_A Uncharacterized protein; mainly antiparallel beta sheets, alpha and beta protein, UNK function; HET: MSE BTB PG4; 1.95A {Staphylococcus aureus}

Probab=94.48  E-value=0.22  Score=40.81  Aligned_cols=84  Identities=11%  Similarity=0.095  Sum_probs=55.4

Q ss_pred             CCCceeeeeeeCCchhhHHHHHHhcC-----CeeeeeccCcc-cce-eeeeeccCCCCcceEEEEeEecCce--------
Q 022831          151 PEPLCQVMLRVGDLGRSIKFYEKALG-----MKLLRTIDSPE-LKC-ALAMLGYAEEDQTTVLELAYSYGVT--------  215 (291)
Q Consensus       151 ~~~~~hv~l~v~D~~~~~~Fy~~~lG-----~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~l~l~~~~~~~--------  215 (291)
                      ...++|+++.|.+++        .||     |.+......+. +.. .++.+.      ...||+....+..        
T Consensus        22 ~~~lDHlVi~v~~l~--------~lG~~~~~f~~~~GG~H~~~GT~N~Li~fd------g~YLElIai~~~~~~~~~~~~   87 (274)
T 3p8a_A           22 ILKFDHIIHYIDQLD--------RFSFPGDVIKLHSGGYHHKYGTFNKLGYIN------ENYIELLDVENNEKLKKMAKT   87 (274)
T ss_dssp             CCEEEEEEEECTTGG--------GCCCGGGSSCCEEEEEETTTTEEEEEEECS------SSEEEEEEESCHHHHHHHTTS
T ss_pred             cccCCEEEEEeccHH--------HcCCccceEEeCCCccCCCCCCEEEEEeeC------CEEEEEEeecCcccccccccc
Confidence            346999999999874        356     77665432221 111 223332      3677876643321        


Q ss_pred             -----e-------eccCceeeEEEEEecChHHHHHHHHHHHHhhCCeee
Q 022831          216 -----E-------YTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKIT  252 (291)
Q Consensus       216 -----~-------~~~~~g~~hia~~v~di~~~~~~l~~~~~~~G~~~~  252 (291)
                           .       ...++|+.++++.++|+++..+++    .+.|+...
T Consensus        88 ~~~~~~f~~~~~~~~~geGl~~~alrt~Di~a~~a~l----~~~Gl~~~  132 (274)
T 3p8a_A           88 IEGGVAFATQIVQEKYEQGFKNICLHTNDIEAVKNKL----QSEQVEVV  132 (274)
T ss_dssp             TGGGTCTTTHHHHTTTCCEEEEEEEECSCHHHHHHHH----HTTTCEEE
T ss_pred             cCccchHHHHhhhhccCCCeEEEEEecCCHHHHHHHH----HHcCCCcC
Confidence                 0       123569999999999999999999    99998753

>3opy_A 6-phosphofructo-1-kinase alpha-subunit; ATP binding, fructose-6-phosphate bindi magnesium binding, citrate binding, ADP binding; HET: ATP; 3.05A {Pichia pastoris}

Probab=87.57  E-value=13  Score=35.82  Aligned_cols=50  Identities=16%  Similarity=0.216  Sum_probs=35.0

Q ss_pred             eEEEEEECCHHHHHHHHHHcCCeeeeCCccCCCCceEEEEEECCCCcEEEEEecC
Q 022831           94 GHLAIATEDVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFELIQRG  148 (291)
Q Consensus        94 ~~i~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dP~G~~iel~~~~  148 (291)
                      ..+.|.+.|+..+.+.|.+..+.  ..|.+...  . .+|..||-||.|.+....
T Consensus       125 ~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~--~-~~~~~dp~~~~~~~~~~~  174 (989)
T 3opy_A          125 GEVTFFTASIDKLKAKLIEIGAE--IIPSKIDL--V-EFSTRDPMGDVISFSSYP  174 (989)
T ss_dssp             CEEEEECSCHHHHHHHHHHSSCC--BCCCC--C--C-CEEEESSSEEEEECCSSS
T ss_pred             ceEEEEeCcHHHHHHHhhhcccc--cCCCCCCc--e-eEEEecCCCCEEeeecCC
Confidence            46889999999999999987332  22222111  1 368899999999987654

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	291
d1f9za_	135	d.32.1.1 (A:) Glyoxalase I (lactoylglutathione lya	8e-27
d1f9za_	135	d.32.1.1 (A:) Glyoxalase I (lactoylglutathione lya	2e-16
d2c21a1	139	d.32.1.1 (A:3-141) Glyoxalase I (lactoylglutathion	1e-25
d2c21a1	139	d.32.1.1 (A:3-141) Glyoxalase I (lactoylglutathion	2e-12
d1qipa_	176	d.32.1.1 (A:) Glyoxalase I (lactoylglutathione lya	5e-23
d1qipa_	176	d.32.1.1 (A:) Glyoxalase I (lactoylglutathione lya	5e-11
d1sqia1	149	d.32.1.3 (A:8-156) 4-hydroxyphenylpyruvate dioxyge	5e-16
d1twua_	137	d.32.1.8 (A:) Hypothetical protein YycE {Bacillus	1e-15
d1twua_	137	d.32.1.8 (A:) Hypothetical protein YycE {Bacillus	2e-12
d1sqda1	167	d.32.1.3 (A:14-180) 4-hydroxyphenylpyruvate dioxyg	1e-15
d1sqda1	167	d.32.1.3 (A:14-180) 4-hydroxyphenylpyruvate dioxyg	9e-05
d1zswa1	144	d.32.1.10 (A:1-144) Hypothetical protein BC1024 {B	4e-15
d1zswa1	144	d.32.1.10 (A:1-144) Hypothetical protein BC1024 {B	1e-06
d1sp8a1	172	d.32.1.3 (A:36-207) 4-hydroxyphenylpyruvate dioxyg	5e-15
d1sp8a1	172	d.32.1.3 (A:36-207) 4-hydroxyphenylpyruvate dioxyg	0.001
d1ss4a_	149	d.32.1.6 (A:) Hypothetical protein BC1747 {Bacillu	2e-14
d1ss4a_	149	d.32.1.6 (A:) Hypothetical protein BC1747 {Bacillu	4e-04
d1jc4a_	145	d.32.1.4 (A:) Methylmalonyl-CoA epimerase {Propion	3e-14
d1mpya2	162	d.32.1.3 (A:146-307) Catechol 2,3-dioxygenase (met	3e-14
d1mpya2	162	d.32.1.3 (A:146-307) Catechol 2,3-dioxygenase (met	2e-04
d1f1ua1	146	d.32.1.3 (A:2-147) Homoprotocatechuate 2,3-dioxyge	7e-14
d1t47a1	163	d.32.1.3 (A:16-178) 4-hydroxyphenylpyruvate dioxyg	9e-14
d1t47a1	163	d.32.1.3 (A:16-178) 4-hydroxyphenylpyruvate dioxyg	0.002
d1mpya1	145	d.32.1.3 (A:1-145) Catechol 2,3-dioxygenase (metap	2e-13
d1mpya1	145	d.32.1.3 (A:1-145) Catechol 2,3-dioxygenase (metap	2e-04
d1r9ca_	130	d.32.1.2 (A:) Fosfomycin resistance protein FosX {	7e-13
d1r9ca_	130	d.32.1.2 (A:) Fosfomycin resistance protein FosX {	1e-05
d1nkia_	134	d.32.1.2 (A:) Fosfomycin resistance protein A (Fos	4e-11
d1f1ua2	176	d.32.1.3 (A:148-323) Homoprotocatechuate 2,3-dioxy	7e-11
d1f1ua2	176	d.32.1.3 (A:148-323) Homoprotocatechuate 2,3-dioxy	3e-04
d1lgta1	131	d.32.1.3 (A:2-132) 2,3-Dihydroxybiphenyl dioxygena	7e-11
d1npba_	140	d.32.1.2 (A:) Fosfomycin resistance protein A (Fos	2e-10
d1npba_	140	d.32.1.2 (A:) Fosfomycin resistance protein A (Fos	0.002
d1xqaa_	113	d.32.1.2 (A:) Hypothetical protein BC3580 {Bacillu	5e-10
d1xqaa_	113	d.32.1.2 (A:) Hypothetical protein BC3580 {Bacillu	0.003
d2pjsa1	111	d.32.1.2 (A:3-113) Uncharacterized protein Atu1953	6e-10
d1kw3b1	132	d.32.1.3 (B:1-132) 2,3-Dihydroxybiphenyl dioxygena	2e-09
d1zswa2	170	d.32.1.10 (A:145-314) Hypothetical protein BC1024	4e-09
d1klla_	128	d.32.1.2 (A:) Mitomycin resistance protein D, MRD	8e-09
d1xrka_	120	d.32.1.2 (A:) Bleomycin resistance protein, BRP {S	1e-08
d1xrka_	120	d.32.1.2 (A:) Bleomycin resistance protein, BRP {S	0.002
d1cjxa2	203	d.32.1.3 (A:154-356) 4-hydroxyphenylpyruvate dioxy	1e-08
d1sp8a2	224	d.32.1.3 (A:208-431) 4-hydroxyphenylpyruvate dioxy	2e-08
d1sp8a2	224	d.32.1.3 (A:208-431) 4-hydroxyphenylpyruvate dioxy	0.002
d2i7ra1	115	d.32.1.2 (A:1-115) Hypotheical protein SP0731 {Str	4e-08
d2i7ra1	115	d.32.1.2 (A:1-115) Hypotheical protein SP0731 {Str	0.003
d1xy7a_	135	d.32.1.9 (A:) Hypothetical protein At5g48480 {Thal	1e-07
d1ecsa_	120	d.32.1.2 (A:) Bleomycin resistance protein, BRP {K	2e-07
d1t47a2	199	d.32.1.3 (A:179-377) 4-hydroxyphenylpyruvate dioxy	3e-06
d1jifa_	122	d.32.1.2 (A:) Bleomycin resistance protein, BRP {S	3e-06
d1kw3b2	156	d.32.1.3 (B:133-288) 2,3-Dihydroxybiphenyl dioxyge	7e-06
d1sqia2	210	d.32.1.3 (A:157-366) 4-hydroxyphenylpyruvate dioxy	1e-05
d1sqda2	230	d.32.1.3 (A:181-410) 4-hydroxyphenylpyruvate dioxy	3e-05
d1u6la_	137	d.32.1.7 (A:) Hypothetical protein PA1353 {Pseudom	1e-04
d1cjxa1	150	d.32.1.3 (A:4-153) 4-hydroxyphenylpyruvate dioxyge	8e-04

>d1f9za_ d.32.1.1 (A:) Glyoxalase I (lactoylglutathione lyase) {Escherichia coli [TaxId: 562]} Length = 135

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Glyoxalase I (lactoylglutathione lyase)
domain: Glyoxalase I (lactoylglutathione lyase)
species: Escherichia coli [TaxId: 562]

 Score =  100 bits (248), Expect = 8e-27
 Identities = 71/132 (53%), Positives = 93/132 (70%)

Query: 23  RLLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNY 82
           RLLH + RVGDL R+I +YT+  GM+LLR  + PE KYS AF+G+GPE    V+ELTYN+
Sbjct: 2   RLLHTMLRVGDLQRSIDFYTKVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNW 61

Query: 83  GVTSYDIGTGFGHLAIATEDVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIF 142
           GV  Y++GT +GH+A++ ++  +  E IR  GGNVTRE GP+KG TT  AFV+DPDGY  
Sbjct: 62  GVDKYELGTAYGHIALSVDNAAEACEKIRQNGGNVTREAGPVKGGTTVIAFVEDPDGYKI 121

Query: 143 ELIQRGPTPEPL 154
           ELI+       L
Sbjct: 122 ELIEEKDAGRGL 133

>d1f9za_ d.32.1.1 (A:) Glyoxalase I (lactoylglutathione lyase) {Escherichia coli [TaxId: 562]} Length = 135

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Glyoxalase I (lactoylglutathione lyase)
domain: Glyoxalase I (lactoylglutathione lyase)
species: Escherichia coli [TaxId: 562]

 Score = 72.4 bits (176), Expect = 2e-16
 Identities = 60/132 (45%), Positives = 85/132 (64%), Gaps = 4/132 (3%)

Query: 157 VMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTE 216
            MLRVGDL RSI FY K LGMKLLRT ++PE K +LA +GY  E +  V+EL Y++GV +
Sbjct: 6   TMLRVGDLQRSIDFYTKVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNWGVDK 65

Query: 217 YTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKT 276
           Y  G AY  +A+S D+  ++ E +    ++ GG +TR+ GP+ G  T I    DPDG+K 
Sbjct: 66  YELGTAYGHIALSVDNAAEACEKI----RQNGGNVTREAGPVKGGTTVIAFVEDPDGYKI 121

Query: 277 VLVDNEDFLKEL 288
            L++ +D  + L
Sbjct: 122 ELIEEKDAGRGL 133

>d2c21a1 d.32.1.1 (A:3-141) Glyoxalase I (lactoylglutathione lyase) {Leishmania major [TaxId: 5664]} Length = 139

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Glyoxalase I (lactoylglutathione lyase)
domain: Glyoxalase I (lactoylglutathione lyase)
species: Leishmania major [TaxId: 5664]

 Score = 97.1 bits (240), Expect = 1e-25
 Identities = 67/132 (50%), Positives = 85/132 (64%), Gaps = 5/132 (3%)

Query: 22  RRLLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYN 81
           RR+LH + RVGDLDR+IK+YTE  GM++LRK DVPE+KY+  FLG+GPE S  V+ELTYN
Sbjct: 2   RRMLHTMIRVGDLDRSIKFYTERLGMKVLRKWDVPEDKYTLVFLGYGPEMSSTVLELTYN 61

Query: 82  YGVTSYDIGTGFGHLAIATEDVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYI 141
           YGVTSY     +GH+AI  EDV ++V ++R     +  E           AFV DPDGY 
Sbjct: 62  YGVTSYKHDEAYGHIAIGVEDVKELVADMRKHDVPIDYEDES-----GFMAFVVDPDGYY 116

Query: 142 FELIQRGPTPEP 153
            EL+      E 
Sbjct: 117 IELLNEKTMMEK 128

>d2c21a1 d.32.1.1 (A:3-141) Glyoxalase I (lactoylglutathione lyase) {Leishmania major [TaxId: 5664]} Length = 139

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Glyoxalase I (lactoylglutathione lyase)
domain: Glyoxalase I (lactoylglutathione lyase)
species: Leishmania major [TaxId: 5664]

 Score = 61.6 bits (148), Expect = 2e-12
 Identities = 51/131 (38%), Positives = 72/131 (54%), Gaps = 9/131 (6%)

Query: 157 VMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTE 216
            M+RVGDL RSIKFY + LGMK+LR  D PE K  L  LGY  E  +TVLEL Y+YGVT 
Sbjct: 7   TMIRVGDLDRSIKFYTERLGMKVLRKWDVPEDKYTLVFLGYGPEMSSTVLELTYNYGVTS 66

Query: 217 YTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKT 276
           Y    AY  +AI  +DV +    +    ++    I  +       +  +   VDPDG+  
Sbjct: 67  YKHDEAYGHIAIGVEDVKELVADM----RKHDVPIDYEDE-----SGFMAFVVDPDGYYI 117

Query: 277 VLVDNEDFLKE 287
            L++ +  +++
Sbjct: 118 ELLNEKTMMEK 128

>d1qipa_ d.32.1.1 (A:) Glyoxalase I (lactoylglutathione lyase) {Human (Homo sapiens) [TaxId: 9606]} Length = 176

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Glyoxalase I (lactoylglutathione lyase)
domain: Glyoxalase I (lactoylglutathione lyase)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 91.2 bits (225), Expect = 5e-23
 Identities = 40/153 (26%), Positives = 62/153 (40%), Gaps = 26/153 (16%)

Query: 23  RLLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVE----- 77
            L   + RV D  +++ +YT   GM L++K D P  K+S  FL +  +      +     
Sbjct: 23  LLQQTMLRVKDPKKSLDFYTRVLGMTLIQKCDFPIMKFSLYFLAYEDKNDIPKEKDEKIA 82

Query: 78  ----------LTYNYGVTSYD---------IGTGFGHLAIATEDVYKMVENIRAKGGNVT 118
                     LT+N+G    +            GFGH+ IA  DVY   +     G    
Sbjct: 83  WALSRKATLELTHNWGTEDDETQSYHNGNSDPRGFGHIGIAVPDVYSACKRFEELGVKFV 142

Query: 119 REPGPLKGMTTHFAFVKDPDGYIFELIQRGPTP 151
           ++P    G     AF++DPDGY  E++      
Sbjct: 143 KKPDD--GKMKGLAFIQDPDGYWIEILNPNKMA 173

>d1qipa_ d.32.1.1 (A:) Glyoxalase I (lactoylglutathione lyase) {Human (Homo sapiens) [TaxId: 9606]} Length = 176

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Glyoxalase I (lactoylglutathione lyase)
domain: Glyoxalase I (lactoylglutathione lyase)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 58.1 bits (139), Expect = 5e-11
 Identities = 32/146 (21%), Positives = 52/146 (35%), Gaps = 22/146 (15%)

Query: 154 LCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELA---- 209
           L Q MLRV D  +S+ FY + LGM L++  D P +K +L  L Y +++     +      
Sbjct: 24  LQQTMLRVKDPKKSLDFYTRVLGMTLIQKCDFPIMKFSLYFLAYEDKNDIPKEKDEKIAW 83

Query: 210 ----------------YSYGVTEYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITR 253
                                  Y  GN+  +                   +ELG K  +
Sbjct: 84  ALSRKATLELTHNWGTEDDETQSYHNGNSDPRGFGHIGIAVPDVYSACKRFEELGVKFVK 143

Query: 254 QPGPIPGLNTKITSFVDPDGWKTVLV 279
           +P         +    DPDG+   ++
Sbjct: 144 KPDDGKM--KGLAFIQDPDGYWIEIL 167

>d1sqia1 d.32.1.3 (A:8-156) 4-hydroxyphenylpyruvate dioxygenase, HppD {Human (Homo sapiens) [TaxId: 9606]} Length = 149

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 71.4 bits (174), Expect = 5e-16
 Identities = 27/141 (19%), Positives = 48/141 (34%), Gaps = 10/141 (7%)

Query: 17  PKKDKRRLL---HAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSY 73
           PK ++ R L      + VG+  +   +Y    G E L  + +               +  
Sbjct: 2   PKPERGRFLHFHSVTFWVGNAKQAASFYCNKMGFEPLAYKGLETGSREVVSHVIKQGKIV 61

Query: 74  FVVELTYNYGVTSYDI-----GTGFGHLAIATEDVYKMVENIRAKGGNVTREPGPLK--G 126
           FV+    N             G G   +A   ED   +V+  R +G  + REP   +   
Sbjct: 62  FVLCSALNPWNKEMGDHLVKHGDGVKDIAFEVEDCEHIVQKARERGAKIVREPWVEEDKF 121

Query: 127 MTTHFAFVKDPDGYIFELIQR 147
               FA ++        L+++
Sbjct: 122 GKVKFAVLQTYGDTTHTLVEK 142

>d1twua_ d.32.1.8 (A:) Hypothetical protein YycE {Bacillus subtilis [TaxId: 1423]} Length = 137

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Hypothetical protein YycE
domain: Hypothetical protein YycE
species: Bacillus subtilis [TaxId: 1423]

 Score = 70.3 bits (171), Expect = 1e-15
 Identities = 15/130 (11%), Positives = 34/130 (26%), Gaps = 6/130 (4%)

Query: 23  RLLHAVYRV----GDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVEL 78
               A  R+    G LD  I++Y E   ++ + +           F     +      + 
Sbjct: 5   SFQAAQIRIARPTGQLDEIIRFYEEGLCLKRIGEFSQHNGYDGVMFGLPHADYHLEFTQY 64

Query: 79  TYNYGVTSYDIGTGFGHLAIATEDVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPD 138
                       +          ++  +   ++  G        P          ++DPD
Sbjct: 65  EGGSTAPVPHPDSLLVFYVPNAVELAAITSKLKHMGYQEVESENPYWSN--GGVTIEDPD 122

Query: 139 GYIFELIQRG 148
           G+    +   
Sbjct: 123 GWRIVFMNSK 132

>d1twua_ d.32.1.8 (A:) Hypothetical protein YycE {Bacillus subtilis [TaxId: 1423]} Length = 137

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Hypothetical protein YycE
domain: Hypothetical protein YycE
species: Bacillus subtilis [TaxId: 1423]

 Score = 61.5 bits (148), Expect = 2e-12
 Identities = 17/133 (12%), Positives = 40/133 (30%), Gaps = 10/133 (7%)

Query: 154 LCQVMLRV----GDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELA 209
                +R+    G L   I+FYE+ L +K +           +       +      +  
Sbjct: 6   FQAAQIRIARPTGQLDEIIRFYEEGLCLKRIGEFSQHNGYDGVMFGLPHADYHLEFTQYE 65

Query: 210 YSYGVTEYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFV 269
                      +       +  ++      +    + +G +      P         +  
Sbjct: 66  GGSTAPVPHPDSLLVFYVPNAVELAAITSKL----KHMGYQEVESENPYWSNGG--VTIE 119

Query: 270 DPDGWKTVLVDNE 282
           DPDGW+ V ++++
Sbjct: 120 DPDGWRIVFMNSK 132

>d1sqda1 d.32.1.3 (A:14-180) 4-hydroxyphenylpyruvate dioxygenase, HppD {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 167

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 70.6 bits (172), Expect = 1e-15
 Identities = 28/157 (17%), Positives = 45/157 (28%), Gaps = 27/157 (17%)

Query: 17  PKKDK---RRLLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSY 73
           PK DK   +R  H  +  GD     + ++   GM    K D+      +A          
Sbjct: 3   PKSDKFKVKRFHHIEFWCGDATNVARRFSWGLGMRFSAKSDLSTGNMVHASYLLTSGDLR 62

Query: 74  FVVELTYNYGVTSYDIG-----------------------TGFGHLAIATEDVYKMVENI 110
           F+    Y+  +++ +I                         G   +AI  ED        
Sbjct: 63  FLFTAPYSPSLSAGEIKPTTTASIPSFDHGSCRSFFSSHGLGVRAVAIEVEDAESAFSIS 122

Query: 111 RAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFELIQR 147
            A G   +  P  L       A VK     +   +  
Sbjct: 123 VANGAIPSSPPIVLNE-AVTIAEVKLYGDVVLRYVSY 158

>d1sqda1 d.32.1.3 (A:14-180) 4-hydroxyphenylpyruvate dioxygenase, HppD {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 167

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 39.8 bits (92), Expect = 9e-05
 Identities = 17/127 (13%), Positives = 30/127 (23%), Gaps = 27/127 (21%)

Query: 157 VMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTE 216
           +    GD     + +   LGM+     D        A       D   +    YS  ++ 
Sbjct: 16  IEFWCGDATNVARRFSWGLGMRFSAKSDLSTGNMVHASYLLTSGDLRFLFTAPYSPSLSA 75

Query: 217 -----------------------YTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITR 253
                                   + G     VAI  +D   +  +        G   + 
Sbjct: 76  GEIKPTTTASIPSFDHGSCRSFFSSHGLGVRAVAIEVEDAESAFSIS----VANGAIPSS 131

Query: 254 QPGPIPG 260
            P  +  
Sbjct: 132 PPIVLNE 138

>d1zswa1 d.32.1.10 (A:1-144) Hypothetical protein BC1024 {Bacillus cereus [TaxId: 1396]} Length = 144

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: BC1024-like
domain: Hypothetical protein BC1024
species: Bacillus cereus [TaxId: 1396]

 Score = 68.9 bits (167), Expect = 4e-15
 Identities = 8/134 (5%), Positives = 27/134 (20%), Gaps = 2/134 (1%)

Query: 22  RRLLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYN 81
           +   H      + +    +Y    G+  ++     ++             S       + 
Sbjct: 5   KGHHHISMVTKNANENNHFYKNVLGLRRVKMTVNQDDPSMYHLFYGDKTGSPGTELSFFE 64

Query: 82  YGVT--SYDIGTGFGHLAIATEDVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDG 139
             +   +Y        + +       +            +               +D +G
Sbjct: 65  IPLVGRTYRGTNAITRIGLLVPSEDSLHYWKERFEKFDVKHSEMTTYANRPALQFEDAEG 124

Query: 140 YIFELIQRGPTPEP 153
               L+        
Sbjct: 125 LRLVLLVSNGEKVE 138

>d1zswa1 d.32.1.10 (A:1-144) Hypothetical protein BC1024 {Bacillus cereus [TaxId: 1396]} Length = 144

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: BC1024-like
domain: Hypothetical protein BC1024
species: Bacillus cereus [TaxId: 1396]

 Score = 44.6 bits (104), Expect = 1e-06
 Identities = 15/129 (11%), Positives = 34/129 (26%), Gaps = 6/129 (4%)

Query: 157 VMLRVGDLGRSIKFYEKALGMKLLR--TIDSPELKCALAMLGYAEEDQTTVLELAYSYGV 214
           + +   +   +  FY+  LG++ ++            L          T +         
Sbjct: 10  ISMVTKNANENNHFYKNVLGLRRVKMTVNQDDPSMYHLFYGDKTGSPGTELSFFEIPLVG 69

Query: 215 TEYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGW 274
             Y   NA  ++ +                +       +        N     F D +G 
Sbjct: 70  RTYRGTNAITRIGLLVPSEDSLHYWKERFEK----FDVKHSEMTTYANRPALQFEDAEGL 125

Query: 275 KTVLVDNED 283
           + VL+ +  
Sbjct: 126 RLVLLVSNG 134

>d1sp8a1 d.32.1.3 (A:36-207) 4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Zea mays) [TaxId: 4577]} Length = 172

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Corn (Zea mays) [TaxId: 4577]

 Score = 69.5 bits (169), Expect = 5e-15
 Identities = 21/151 (13%), Positives = 37/151 (24%), Gaps = 21/151 (13%)

Query: 17  PKKDK---RRLLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSY 73
           P+ D+       H      D       ++   G  L  + D+     ++A L        
Sbjct: 4   PRSDRFHTLAFHHVELWCADAASAAGRFSFGLGAPLAARSDLSTGNSAHASLLLRSGSLS 63

Query: 74  FVVELTYNYGVTSYDI-----------------GTGFGHLAIATEDVYKMVENIRAKGGN 116
           F+    Y +G  +                    G     +A+   D         A G  
Sbjct: 64  FLFTAPYAHGADAATAALPSFSAAAARRFAADHGLAVRAVALRVADAEDAFRASVAAGAR 123

Query: 117 VTREPGPLKGMTTHFAFVKDPDGYIFELIQR 147
               P  L       A V+     +   +  
Sbjct: 124 PAFGPVDLGRGFR-LAEVELYGDVVLRYVSY 153

>d1sp8a1 d.32.1.3 (A:36-207) 4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Zea mays) [TaxId: 4577]} Length = 172

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Corn (Zea mays) [TaxId: 4577]

 Score = 36.8 bits (84), Expect = 0.001
 Identities = 18/117 (15%), Positives = 27/117 (23%), Gaps = 13/117 (11%)

Query: 157 VMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTE 216
           V L   D   +   +   LG  L    D      A A L       + +    Y++G   
Sbjct: 17  VELWCADAASAAGRFSFGLGAPLAARSDLSTGNSAHASLLLRSGSLSFLFTAPYAHGADA 76

Query: 217 YTKGNAYAQVAISTDDVYKSAEVVNLVT-------------QELGGKITRQPGPIPG 260
            T        A +          V  V                 G +    P  +  
Sbjct: 77  ATAALPSFSAAAARRFAADHGLAVRAVALRVADAEDAFRASVAAGARPAFGPVDLGR 133

>d1ss4a_ d.32.1.6 (A:) Hypothetical protein BC1747 {Bacillus cereus (strain ATCC 14579 / DSM 31) [TaxId: 226900]} Length = 149

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Hypothetical protein BC1747
domain: Hypothetical protein BC1747
species: Bacillus cereus (strain ATCC 14579 / DSM 31) [TaxId: 226900]

 Score = 67.4 bits (163), Expect = 2e-14
 Identities = 19/140 (13%), Positives = 40/140 (28%), Gaps = 16/140 (11%)

Query: 23  RLLHAVYRVGDLDRTIKYYTECFGMELLRK--------RDVPEEKYSNAFLGFGPEQSYF 74
           R+ +    V  LD  I ++ E       R         R                   + 
Sbjct: 9   RMDNVSIVVESLDNAISFFEEIGLNLEGRANVEGEWAGRVTGLGSQCVEIAMMVTPDGHS 68

Query: 75  VVELTYNYGVTS-------YDIGTGFGHLAIATEDVYKMVENIRAKGGNVTREPGPLKGM 127
            +EL+      +            G+  +    ED+ +MV  +   G  +  E    +  
Sbjct: 69  RIELSRFLTPPTIADHRTAPVNALGYLRVMFTVEDIDEMVSRLTKHGAELVGEVVQYENS 128

Query: 128 TTHFAFVKDPDGYIFELIQR 147
                +++  +G +  L + 
Sbjct: 129 Y-RLCYIRGVEGILIGLAEE 147

>d1ss4a_ d.32.1.6 (A:) Hypothetical protein BC1747 {Bacillus cereus (strain ATCC 14579 / DSM 31) [TaxId: 226900]} Length = 149

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Hypothetical protein BC1747
domain: Hypothetical protein BC1747
species: Bacillus cereus (strain ATCC 14579 / DSM 31) [TaxId: 226900]

 Score = 37.7 bits (86), Expect = 4e-04
 Identities = 17/129 (13%), Positives = 40/129 (31%), Gaps = 14/129 (10%)

Query: 157 VMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKC---------ALAMLGYAEEDQTTVLE 207
           V + V  L  +I F+E  +G+ L    +                + +      D  + +E
Sbjct: 13  VSIVVESLDNAISFFE-EIGLNLEGRANVEGEWAGRVTGLGSQCVEIAMMVTPDGHSRIE 71

Query: 208 LAYSYGVTEYTKGNAYAQVAISTDDVYKSAEVVNLVTQEL---GGKITRQPGPIPGLNTK 264
           L+                 A+    V  + E ++ +   L   G ++  +       + +
Sbjct: 72  LSRFLTPPTIADHRTAPVNALGYLRVMFTVEDIDEMVSRLTKHGAELVGEVVQYEN-SYR 130

Query: 265 ITSFVDPDG 273
           +      +G
Sbjct: 131 LCYIRGVEG 139

>d1jc4a_ d.32.1.4 (A:) Methylmalonyl-CoA epimerase {Propionibacterium shermanii [TaxId: 1752]} Length = 145

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Methylmalonyl-CoA epimerase
domain: Methylmalonyl-CoA epimerase
species: Propionibacterium shermanii [TaxId: 1752]

 Score = 66.6 bits (161), Expect = 3e-14
 Identities = 27/136 (19%), Positives = 49/136 (36%), Gaps = 12/136 (8%)

Query: 23  RLLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVV--ELTY 80
            + H  Y   D D   KYY E FG   L + + PE+      +    + +  +   ++  
Sbjct: 7   CIDHVAYACPDADEASKYYQETFGWHELHREENPEQGVVEIMMAPAAKLTEHMTQVQVMA 66

Query: 81  NYGVTS--------YDIGTGFGHLAIATEDVYKMVENIRAKGGNVTREPGPLKGMTTHFA 132
                S        ++   G  H+A   +D+  +   +R +G  +  +   L        
Sbjct: 67  PLNDESTVAKWLAKHNGRAGLHHMAWRVDDIDAVSATLRERGVQLLYDEPKLGTGGNRIN 126

Query: 133 FV--KDPDGYIFELIQ 146
           F+  K   G + EL Q
Sbjct: 127 FMHPKSGKGVLIELTQ 142

>d1mpya2 d.32.1.3 (A:146-307) Catechol 2,3-dioxygenase (metapyrocatechase) {Pseudomonas putida, mt2 [TaxId: 303]} Length = 162

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Catechol 2,3-dioxygenase (metapyrocatechase)
species: Pseudomonas putida, mt2 [TaxId: 303]

 Score = 66.9 bits (162), Expect = 3e-14
 Identities = 24/157 (15%), Positives = 48/157 (30%), Gaps = 12/157 (7%)

Query: 23  RLLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNY 82
           R  HA+    +L  T   +T+  G  L  +                  Q   +    ++ 
Sbjct: 5   RFDHALMYGDELPATYDLFTKVLGFYLAEQVLDENGTR--------VAQFLSLSTKAHDV 56

Query: 83  GVTSYDIGTGFGHLAIATEDVYKMVEN---IRAKGGNVTREPGPLKGMTTHFAFVKDPDG 139
               +       H++   E    ++     I     ++   P           +  DP G
Sbjct: 57  AFIHHPEKGRLHHVSFHLETWEDLLRAADLISMTDTSIDIGPTRHGLTHGKTIYFFDPSG 116

Query: 140 YIFELIQRGPTPEPLCQ-VMLRVGDLGRSIKFYEKAL 175
              E+   G    P  + V      LG++I ++++ L
Sbjct: 117 NRNEVFCGGDYNYPDHKPVTWTTDQLGKAIFYHDRIL 153

>d1mpya2 d.32.1.3 (A:146-307) Catechol 2,3-dioxygenase (metapyrocatechase) {Pseudomonas putida, mt2 [TaxId: 303]} Length = 162

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Catechol 2,3-dioxygenase (metapyrocatechase)
species: Pseudomonas putida, mt2 [TaxId: 303]

 Score = 39.1 bits (90), Expect = 2e-04
 Identities = 14/119 (11%), Positives = 31/119 (26%), Gaps = 13/119 (10%)

Query: 157 VMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTE 216
            ++   +L  +   + K LG  L   +                      L L+       
Sbjct: 9   ALMYGDELPATYDLFTKVLGFYLAEQVLDEN-----------GTRVAQFLSLSTKAHDVA 57

Query: 217 YTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITS--FVDPDG 273
           +       ++   +  +    +++           +   GP     T   +  F DP G
Sbjct: 58  FIHHPEKGRLHHVSFHLETWEDLLRAADLISMTDTSIDIGPTRHGLTHGKTIYFFDPSG 116

>d1f1ua1 d.32.1.3 (A:2-147) Homoprotocatechuate 2,3-dioxygenase {Arthrobacter globiformis [TaxId: 1665]} Length = 146

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Homoprotocatechuate 2,3-dioxygenase
species: Arthrobacter globiformis [TaxId: 1665]

 Score = 65.4 bits (158), Expect = 7e-14
 Identities = 21/140 (15%), Positives = 41/140 (29%), Gaps = 10/140 (7%)

Query: 17  PKKDKRRLLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVV 76
           P  D  R  +    V DL ++ ++Y +  G+ +  + +                    V+
Sbjct: 10  PAPDIVRCAYMEIVVTDLAKSREFYVDVLGLHVTEEDE----NTIYLRSLEEFIHHNLVL 65

Query: 77  ELTYNYGVTSYDIGTGFGHLAIATEDVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKD 136
                  V ++       +   +  +V       +  G    R              V+D
Sbjct: 66  RQGPIAAVAAF------AYRVKSPAEVDAAEAYYKELGCRTERRKEGFTKGIGDSVRVED 119

Query: 137 PDGYIFELIQRGPTPEPLCQ 156
           P G+ +E        E L Q
Sbjct: 120 PLGFPYEFFYETEHVERLTQ 139

>d1t47a1 d.32.1.3 (A:16-178) 4-hydroxyphenylpyruvate dioxygenase, HppD {Streptomyces avermitilis [TaxId: 33903]} Length = 163

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Streptomyces avermitilis [TaxId: 33903]

 Score = 65.6 bits (159), Expect = 9e-14
 Identities = 27/136 (19%), Positives = 39/136 (28%), Gaps = 10/136 (7%)

Query: 22  RRLLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYN 81
           + +   V+ VG+  +   YY+  FGM+L+            A        + FV+     
Sbjct: 6   KGMDAVVFAVGNAKQAAHYYSTAFGMQLVAYSGPENGSRETASYVLTNGSARFVLTSVIK 65

Query: 82  YGVTSYDI--------GTGFGHLAIATEDVYKMVENIRAKGGNVTREPGPLK--GMTTHF 131
                           G G   LAI   D           G     EP  LK    T   
Sbjct: 66  PATPWGHFLADHVAEHGDGVVDLAIEVPDARAAHAYAIEHGARSVAEPYELKDEHGTVVL 125

Query: 132 AFVKDPDGYIFELIQR 147
           A +         L+ R
Sbjct: 126 AAIATYGKTRHTLVDR 141

>d1t47a1 d.32.1.3 (A:16-178) 4-hydroxyphenylpyruvate dioxygenase, HppD {Streptomyces avermitilis [TaxId: 33903]} Length = 163

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Streptomyces avermitilis [TaxId: 33903]

 Score = 36.4 bits (83), Expect = 0.002
 Identities = 21/138 (15%), Positives = 38/138 (27%), Gaps = 14/138 (10%)

Query: 157 VMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTE 216
           V+  VG+  ++  +Y  A GM+L+            A           VL          
Sbjct: 11  VVFAVGNAKQAAHYYSTAFGMQLVAYSGPENGSRETASYVLTNGSARFVLTSVIKPATPW 70

Query: 217 Y--------TKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSF 268
                      G+    +AI   D   +         E G +   +P  +   +  +   
Sbjct: 71  GHFLADHVAEHGDGVVDLAIEVPDARAAHAYA----IEHGARSVAEPYELKDEHGTVVLA 126

Query: 269 V--DPDGWKTVLVDNEDF 284
                   +  LVD   +
Sbjct: 127 AIATYGKTRHTLVDRTGY 144

>d1mpya1 d.32.1.3 (A:1-145) Catechol 2,3-dioxygenase (metapyrocatechase) {Pseudomonas putida, mt2 [TaxId: 303]} Length = 145

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Catechol 2,3-dioxygenase (metapyrocatechase)
species: Pseudomonas putida, mt2 [TaxId: 303]

 Score = 64.2 bits (155), Expect = 2e-13
 Identities = 20/129 (15%), Positives = 39/129 (30%), Gaps = 9/129 (6%)

Query: 18  KKDKRRLLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVE 77
            K   R  H   RV D+ + +++Y E  G+  + + D                       
Sbjct: 2   NKGVMRPGHVQLRVLDMSKALEHYVELLGLIEMDRDDQGRVYLKAWTEVDKF-------- 53

Query: 78  LTYNYGVTSYDIGTGFGHLAIATEDVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDP 137
            +              G   +  + + ++  ++ A G  V + P             + P
Sbjct: 54  -SLVLREADEPGMDFMGFKVVDEDALRQLERDLMAYGCAVEQLPAGELNSCGRRVRFQAP 112

Query: 138 DGYIFELIQ 146
            G+ FEL  
Sbjct: 113 SGHHFELYA 121

>d1mpya1 d.32.1.3 (A:1-145) Catechol 2,3-dioxygenase (metapyrocatechase) {Pseudomonas putida, mt2 [TaxId: 303]} Length = 145

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Catechol 2,3-dioxygenase (metapyrocatechase)
species: Pseudomonas putida, mt2 [TaxId: 303]

 Score = 38.8 bits (89), Expect = 2e-04
 Identities = 13/117 (11%), Positives = 28/117 (23%), Gaps = 13/117 (11%)

Query: 157 VMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTE 216
           V LRV D+ ++++ Y + LG+  +                               + +  
Sbjct: 11  VQLRVLDMSKALEHYVELLGLIEMDR-------------DDQGRVYLKAWTEVDKFSLVL 57

Query: 217 YTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDG 273
                              +   +       G  + + P        +   F  P G
Sbjct: 58  READEPGMDFMGFKVVDEDALRQLERDLMAYGCAVEQLPAGELNSCGRRVRFQAPSG 114

>d1r9ca_ d.32.1.2 (A:) Fosfomycin resistance protein FosX {Mesorhizobium loti [TaxId: 381]} Length = 130

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Fosfomycin resistance protein FosX
species: Mesorhizobium loti [TaxId: 381]

 Score = 62.2 bits (150), Expect = 7e-13
 Identities = 22/124 (17%), Positives = 39/124 (31%), Gaps = 8/124 (6%)

Query: 22  RRLLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSN-AFLGFGPEQSYFVVELTY 80
             L H  + V DL+R  +     F    +   D  +   S   F   G       + +  
Sbjct: 3   EGLSHMTFIVRDLERMTRILEGVFDAREVYASDTEQFSLSREKFFLIGD------IWVAI 56

Query: 81  NYGVTSYDIGTGFGHLAIATEDVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGY 140
             G    +         I   D  +  E +   G ++      ++G      +  D D +
Sbjct: 57  MQGEKLAERSYNHIAFKIDDADFDRYAERVGKLGLDMRPPRPRVEGE-GRSIYFYDDDNH 115

Query: 141 IFEL 144
           +FEL
Sbjct: 116 MFEL 119

>d1r9ca_ d.32.1.2 (A:) Fosfomycin resistance protein FosX {Mesorhizobium loti [TaxId: 381]} Length = 130

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Fosfomycin resistance protein FosX
species: Mesorhizobium loti [TaxId: 381]

 Score = 41.8 bits (97), Expect = 1e-05
 Identities = 17/117 (14%), Positives = 31/117 (26%), Gaps = 10/117 (8%)

Query: 157 VMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTE 216
           +   V DL R  +  E     + +    S   + +L+   +       V  +        
Sbjct: 8   MTFIVRDLERMTRILEGVFDAREVY--ASDTEQFSLSREKFFLIGDIWVAIMQGEKLAER 65

Query: 217 YTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDG 273
                A+       D   +          +LG  +      + G    I  F D D 
Sbjct: 66  SYNHIAFKIDDADFDRYAERVG-------KLGLDMRPPRPRVEGEGRSIY-FYDDDN 114

>d1nkia_ d.32.1.2 (A:) Fosfomycin resistance protein A (FosA) {Pseudomonas aeruginosa [TaxId: 287]} Length = 134

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Fosfomycin resistance protein A (FosA)
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 57.6 bits (138), Expect = 4e-11
 Identities = 24/123 (19%), Positives = 36/123 (29%), Gaps = 14/123 (11%)

Query: 22  RRLLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYN 81
             L H    V DL  +I +Y +  G  L             A+L  G       + L+  
Sbjct: 3   TGLNHLTLAVADLPASIAFYRDLLGFRLEA------RWDQGAYLELGSLW----LCLSRE 52

Query: 82  YGVTSYDIGTGFGHLAIATEDVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYI 141
                           IA  D  +    +RA G    ++            +  DPDG+ 
Sbjct: 53  PQYGGPAADYTHYAFGIAAADFARFAAQLRAHGVREWKQN----RSEGDSFYFLDPDGHR 108

Query: 142 FEL 144
            E 
Sbjct: 109 LEA 111

>d1f1ua2 d.32.1.3 (A:148-323) Homoprotocatechuate 2,3-dioxygenase {Arthrobacter globiformis [TaxId: 1665]} Length = 176

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Homoprotocatechuate 2,3-dioxygenase
species: Arthrobacter globiformis [TaxId: 1665]

 Score = 58.0 bits (139), Expect = 7e-11
 Identities = 21/124 (16%), Positives = 40/124 (32%), Gaps = 9/124 (7%)

Query: 23  RLLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNY 82
           RL H      D+ R   Y  E  G  +       +     A++          +      
Sbjct: 5   RLDHFNQVTPDVPRGRAYL-EDLGFRVSEDIKDSDGVTYAAWMHRKQTVHDTALTGGNGP 63

Query: 83  GVTSYDIGTGFGHLAIATEDVYKMVENIRAKGGNVTREPGPLKGMTTH--FAFVKDPDGY 140
            +      T   H  I       + + + A   +   E GP +   ++  + ++ DPDG+
Sbjct: 64  RMHHVAFATHEKHNIIQ------ICDKMGALRISDRIERGPGRHGVSNAFYLYILDPDGH 117

Query: 141 IFEL 144
             E+
Sbjct: 118 RIEI 121

>d1f1ua2 d.32.1.3 (A:148-323) Homoprotocatechuate 2,3-dioxygenase {Arthrobacter globiformis [TaxId: 1665]} Length = 176

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Homoprotocatechuate 2,3-dioxygenase
species: Arthrobacter globiformis [TaxId: 1665]

 Score = 38.3 bits (88), Expect = 3e-04
 Identities = 17/118 (14%), Positives = 33/118 (27%), Gaps = 9/118 (7%)

Query: 157 VMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTE 216
                 D+ R   + E  LG ++   I   +     A +   +          +   +T 
Sbjct: 9   FNQVTPDVPRGRAYLE-DLGFRVSEDIKDSDGVTYAAWMHRKQTV--------HDTALTG 59

Query: 217 YTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGW 274
                 +     + +          +    +  +I R PG     N      +DPDG 
Sbjct: 60  GNGPRMHHVAFATHEKHNIIQICDKMGALRISDRIERGPGRHGVSNAFYLYILDPDGH 117

>d1lgta1 d.32.1.3 (A:2-132) 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme) {Burkholderia cepacia, formerly Pseudomonas cepacia [TaxId: 292]} Length = 131

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme)
species: Burkholderia cepacia, formerly Pseudomonas cepacia [TaxId: 292]

 Score = 56.9 bits (136), Expect = 7e-11
 Identities = 20/125 (16%), Positives = 33/125 (26%), Gaps = 14/125 (11%)

Query: 22  RRLLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYN 81
           R L +  + V D+     + T+  G+      D             G             
Sbjct: 3   RSLGYMGFAVSDVAAWRSFLTQKLGLMEAGTTD------------NGDLFRIDSRAWRIA 50

Query: 82  YGVTSYDIGTGFGHLAIATEDVYKMVENIRAKGGNVTREPGPLKGMT--THFAFVKDPDG 139
                 D     G+       + +M + ++  G  VT     L      T      DP G
Sbjct: 51  VQQGEVDDLAFAGYEVADAAGLAQMADKLKQAGIAVTTGDASLARRRGVTGLITFADPFG 110

Query: 140 YIFEL 144
              E+
Sbjct: 111 LPLEI 115

>d1npba_ d.32.1.2 (A:) Fosfomycin resistance protein A (FosA) {Serratia marcescens [TaxId: 615]} Length = 140

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Fosfomycin resistance protein A (FosA)
species: Serratia marcescens [TaxId: 615]

 Score = 55.8 bits (133), Expect = 2e-10
 Identities = 18/123 (14%), Positives = 40/123 (32%), Gaps = 11/123 (8%)

Query: 22  RRLLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYN 81
           + L H    V DL +++ ++ E  G+           +++        +    +      
Sbjct: 3   QSLNHLTLAVSDLQKSVTFWHELLGLT-------LHARWNTGAYLTCGDLWVCLSYDEAR 55

Query: 82  YGVTSYDIGTGFGHLAIATEDVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYI 141
             V   +         +A ED   + + +   G  + ++            +  DPDG+ 
Sbjct: 56  QYVPPQESDYTHYAFTVAEEDFEPLSQRLEQAGVTIWKQN----KSEGASFYFLDPDGHK 111

Query: 142 FEL 144
            EL
Sbjct: 112 LEL 114

>d1npba_ d.32.1.2 (A:) Fosfomycin resistance protein A (FosA) {Serratia marcescens [TaxId: 615]} Length = 140

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Fosfomycin resistance protein A (FosA)
species: Serratia marcescens [TaxId: 615]

 Score = 35.4 bits (80), Expect = 0.002
 Identities = 9/25 (36%), Positives = 15/25 (60%)

Query: 157 VMLRVGDLGRSIKFYEKALGMKLLR 181
           + L V DL +S+ F+ + LG+ L  
Sbjct: 8   LTLAVSDLQKSVTFWHELLGLTLHA 32

>d1xqaa_ d.32.1.2 (A:) Hypothetical protein BC3580 {Bacillus cereus [TaxId: 1396]} Length = 113

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Hypothetical protein BC3580
species: Bacillus cereus [TaxId: 1396]

 Score = 54.0 bits (128), Expect = 5e-10
 Identities = 17/122 (13%), Positives = 35/122 (28%), Gaps = 13/122 (10%)

Query: 23  RLLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNY 82
            + H    V D+    ++  + FG+     R                  +   +      
Sbjct: 3   GIKHLNLTVADVVAAREFLEKYFGLTCSGTRGNAFAVM---------RDNDGFILTLMKG 53

Query: 83  GVTSYDIGTGFGHLAIATEDVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIF 142
               Y      G    + E V K+ + ++  G  V            +  +V+ P G+  
Sbjct: 54  KEVQYPKTFHVGFPQESEEQVDKINQRLKEDGFLVEPPKHA----HAYTFYVEAPGGFTI 109

Query: 143 EL 144
           E+
Sbjct: 110 EV 111

>d1xqaa_ d.32.1.2 (A:) Hypothetical protein BC3580 {Bacillus cereus [TaxId: 1396]} Length = 113

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Hypothetical protein BC3580
species: Bacillus cereus [TaxId: 1396]

 Score = 34.7 bits (78), Expect = 0.003
 Identities = 7/24 (29%), Positives = 12/24 (50%)

Query: 157 VMLRVGDLGRSIKFYEKALGMKLL 180
           + L V D+  + +F EK  G+   
Sbjct: 7   LNLTVADVVAAREFLEKYFGLTCS 30

>d2pjsa1 d.32.1.2 (A:3-113) Uncharacterized protein Atu1953 {Agrobacterium tumefaciens [TaxId: 358]} Length = 111

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Uncharacterized protein Atu1953
species: Agrobacterium tumefaciens [TaxId: 358]

 Score = 53.5 bits (127), Expect = 6e-10
 Identities = 18/123 (14%), Positives = 36/123 (29%), Gaps = 13/123 (10%)

Query: 23  RLLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNY 82
           R + A     +  R   +Y +  GM +           S          +          
Sbjct: 2   RRVVANIATPEPARAQAFYGDILGMPVAMDHGWIVTHASPLEAHAQVSFAR--------- 52

Query: 83  GVTSYDIGTGFGHLAIATEDVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIF 142
                  GT    L+I  ++  ++   I   G  +   P   +       F++DP G + 
Sbjct: 53  ---EGGSGTDVPDLSIEVDNFDEVHARILKAGLPIEYGPVT-EAWGVQRLFLRDPFGKLI 108

Query: 143 ELI 145
            ++
Sbjct: 109 NIL 111

>d1kw3b1 d.32.1.3 (B:1-132) 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme) {Pseudomonas sp. [TaxId: 306]} Length = 132

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme)
species: Pseudomonas sp. [TaxId: 306]

 Score = 52.7 bits (125), Expect = 2e-09
 Identities = 20/125 (16%), Positives = 34/125 (27%), Gaps = 14/125 (11%)

Query: 22  RRLLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYN 81
            RL +  + V D+     + T+  G+               A            V+    
Sbjct: 3   ERLGYLGFAVKDVPAWDHFLTKSVGLM------AAGSAGDAALYRADQRAWRIAVQ---- 52

Query: 82  YGVTSYDIGTGFGHLAIATEDVYKMVENIRAKGGNVTREPGPLKG--MTTHFAFVKDPDG 139
                 D     G        + +M + +R  G   TR    L           ++DP G
Sbjct: 53  --PGELDDLAYAGLEVDDAAALERMADKLRQAGVAFTRGDEALMQQRKVMGLLCLQDPFG 110

Query: 140 YIFEL 144
              E+
Sbjct: 111 LPLEI 115

>d1zswa2 d.32.1.10 (A:145-314) Hypothetical protein BC1024 {Bacillus cereus [TaxId: 1396]} Length = 170

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: BC1024-like
domain: Hypothetical protein BC1024
species: Bacillus cereus [TaxId: 1396]

 Score = 52.8 bits (126), Expect = 4e-09
 Identities = 24/131 (18%), Positives = 48/131 (36%), Gaps = 12/131 (9%)

Query: 22  RRLLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYN 81
           + +      V  LD+     TE FG   + + D        A       +++  + + Y 
Sbjct: 11  QGMGSVELTVRRLDKMASTLTEIFGYTEVSRNDQ------EAIFQSIKGEAFGEIVVKYL 64

Query: 82  YGVTSYDIGTGFGHLAIAT---EDVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPD 138
            G T         HLAI      ++    E ++ +G + +   G +        + ++ +
Sbjct: 65  DGPTEKPGRGSIHHLAIRVKNDAELAYWEEQVKQRGFHSS---GIIDRFYFKSLYFRESN 121

Query: 139 GYIFELIQRGP 149
           G +FE+   GP
Sbjct: 122 GILFEIATDGP 132

>d1klla_ d.32.1.2 (A:) Mitomycin resistance protein D, MRD {Streptomyces lavendulae [TaxId: 1914]} Length = 128

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Mitomycin resistance protein D, MRD
species: Streptomyces lavendulae [TaxId: 1914]

 Score = 50.9 bits (120), Expect = 8e-09
 Identities = 21/130 (16%), Positives = 40/130 (30%), Gaps = 4/130 (3%)

Query: 23  RLLHAVYRVGDLDRTIKYYTEC-FGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYN 81
           R+      V D+ +++++Y +    +          E   +  +    +    V      
Sbjct: 2   RISLFAVVVEDMAKSMEFYRKMGVEIPAEADSAPHTEAVLDGGIRLAWDTVETVRSYDPE 61

Query: 82  YGVTSYDIGTGFGHLAIATEDVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYI 141
           +   +             T  V K    +   G     +P         +A VKDPDG +
Sbjct: 62  WQAPTGGHRFAIAFEFPDTASVDKKYAELVDAGYEGHLKPWN-AVWGQRYAIVKDPDGNV 120

Query: 142 FELIQRGPTP 151
            +L    P P
Sbjct: 121 VDLFA--PLP 128

>d1xrka_ d.32.1.2 (A:) Bleomycin resistance protein, BRP {Streptoalloteichus hindustanus [TaxId: 2017]} Length = 120

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Bleomycin resistance protein, BRP
species: Streptoalloteichus hindustanus [TaxId: 2017]

 Score = 50.4 bits (119), Expect = 1e-08
 Identities = 16/126 (12%), Positives = 31/126 (24%), Gaps = 8/126 (6%)

Query: 21  KRRLLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTY 80
           K      V    D+   ++++T+  G   +   D        A +       +       
Sbjct: 2   KLTSAVPVLTARDVAEAVEFWTDRLGFSRVFVED------DFAGVVRDDVTLFISAVQDQ 55

Query: 81  NYGVTSYDIGTGFGHLAIATEDVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGY 140
                +       G   +  E    +  N R   G    E             ++DP G 
Sbjct: 56  VVPDNTQAWVWVRGLDELYAEWSEVVSTNFRDASGPAMTEIVEQPWG--REFALRDPAGN 113

Query: 141 IFELIQ 146
               + 
Sbjct: 114 CVHFVA 119

>d1xrka_ d.32.1.2 (A:) Bleomycin resistance protein, BRP {Streptoalloteichus hindustanus [TaxId: 2017]} Length = 120

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Bleomycin resistance protein, BRP
species: Streptoalloteichus hindustanus [TaxId: 2017]

 Score = 35.4 bits (80), Expect = 0.002
 Identities = 14/116 (12%), Positives = 31/116 (26%), Gaps = 12/116 (10%)

Query: 158 MLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEY 217
           +L   D+  +++F+   LG   +   D      A  +        + V +          
Sbjct: 9   VLTARDVAEAVEFWTDRLGFSRVFVEDD----FAGVVRDDVTLFISAVQDQVVPDN--TQ 62

Query: 218 TKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDG 273
                     +  +     +      +     +I  QP        +  +  DP G
Sbjct: 63  AWVWVRGLDELYAEWSEVVSTNFRDASGPAMTEIVEQPW------GREFALRDPAG 112

>d1cjxa2 d.32.1.3 (A:154-356) 4-hydroxyphenylpyruvate dioxygenase, HppD {Pseudomonas fluorescens [TaxId: 294]} Length = 203

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Pseudomonas fluorescens [TaxId: 294]

 Score = 51.5 bits (123), Expect = 1e-08
 Identities = 18/110 (16%), Positives = 33/110 (30%), Gaps = 10/110 (9%)

Query: 22  RRLLHAVYRV--GDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELT 79
           + + H  + V  G +     +Y + F     R  D+  E                 + L 
Sbjct: 4   KVIDHLTHNVYRGRMVYWANFYEKLFNFREARYFDIKGEYTGLTSKAMSAPDGMIRIPLN 63

Query: 80  YNYGVTSYDIG--------TGFGHLAIATEDVYKMVENIRAKGGNVTREP 121
                 +  I          G  H+A  T+D+ K  + ++  G      P
Sbjct: 64  EESSKGAGQIEEFLMQFNGEGIQHVAFLTDDLVKTWDALKKIGMRFMTAP 113

>d1sp8a2 d.32.1.3 (A:208-431) 4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Zea mays) [TaxId: 4577]} Length = 224

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Corn (Zea mays) [TaxId: 4577]

 Score = 51.7 bits (123), Expect = 2e-08
 Identities = 21/113 (18%), Positives = 38/113 (33%), Gaps = 13/113 (11%)

Query: 22  RRLLHAVYRVGDLDRTIKYYTECFGMELLRKRD-----VPEEKYSNAFLGFGPEQSYFVV 76
            R  H V  V +L     Y+    G     +         E   ++  L    E     +
Sbjct: 8   SRFDHIVGNVPELAPAAAYFAGFTGFHEFAEFTTEDVGTAESGLNSMVLANNSENVLLPL 67

Query: 77  -ELTYNYGVTS-------YDIGTGFGHLAIATEDVYKMVENIRAKGGNVTREP 121
            E  +     S       +  G G  H+A+A++DV + +  ++A+      E 
Sbjct: 68  NEPVHGTKRRSQIQTFLDHHGGPGVQHMALASDDVLRTLREMQARSAMGGFEF 120

>d1sp8a2 d.32.1.3 (A:208-431) 4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Zea mays) [TaxId: 4577]} Length = 224

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Corn (Zea mays) [TaxId: 4577]

 Score = 36.6 bits (84), Expect = 0.002
 Identities = 10/91 (10%), Positives = 31/91 (34%), Gaps = 13/91 (14%)

Query: 161 VGDLGRSIKFYEKALGMKLLRTIDSPELK------CALAMLGYAEEDQTTVLELAYSYGV 214
           V +L  +  ++    G        + ++        ++ +   +E     + E  +    
Sbjct: 17  VPELAPAAAYFAGFTGFHEFAEFTTEDVGTAESGLNSMVLANNSENVLLPLNEPVHGTKR 76

Query: 215 T-------EYTKGNAYAQVAISTDDVYKSAE 238
                   ++  G     +A+++DDV ++  
Sbjct: 77  RSQIQTFLDHHGGPGVQHMALASDDVLRTLR 107

>d2i7ra1 d.32.1.2 (A:1-115) Hypotheical protein SP0731 {Streptococcus pneumoniae [TaxId: 1313]} Length = 115

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Hypotheical protein SP0731
species: Streptococcus pneumoniae [TaxId: 1313]

 Score = 48.7 bits (115), Expect = 4e-08
 Identities = 16/124 (12%), Positives = 36/124 (29%), Gaps = 12/124 (9%)

Query: 23  RLLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNY 82
            L      V ++ +           +            ++ F  F       ++   +  
Sbjct: 2   NLNQLDIIVSNVPQVCADLEHILDKKADYA--------NDGFAQFTIGSHCLMLSQNHLV 53

Query: 83  GVTSYDIGTGFGHLAIATEDVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIF 142
            + ++  G     + I  EDV +  + +   G  V   P      T     V+ P G + 
Sbjct: 54  PLENFQSGI---IIHIEVEDVDQNYKRLNELGIKVLHGPTVTDWGT-ESLLVQGPAGLVL 109

Query: 143 ELIQ 146
           +  +
Sbjct: 110 DFYR 113

>d2i7ra1 d.32.1.2 (A:1-115) Hypotheical protein SP0731 {Streptococcus pneumoniae [TaxId: 1313]} Length = 115

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Hypotheical protein SP0731
species: Streptococcus pneumoniae [TaxId: 1313]

 Score = 34.8 bits (79), Expect = 0.003
 Identities = 16/118 (13%), Positives = 37/118 (31%), Gaps = 16/118 (13%)

Query: 156 QVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVT 215
           Q+ + V ++ +     E  L  K              A  G+A+    +   +     + 
Sbjct: 5   QLDIIVSNVPQVCADLEHILDKKADY-----------ANDGFAQFTIGSHCLMLSQNHLV 53

Query: 216 EYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDG 273
                 +   + I  +DV ++ + +N +  ++    T          T+      P G
Sbjct: 54  PLENFQSGIIIHIEVEDVDQNYKRLNELGIKVLHGPTVTDW-----GTESLLVQGPAG 106

>d1xy7a_ d.32.1.9 (A:) Hypothetical protein At5g48480 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 135

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Hypothetical protein At5g48480
domain: Hypothetical protein At5g48480
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 48.0 bits (113), Expect = 1e-07
 Identities = 17/126 (13%), Positives = 34/126 (26%), Gaps = 9/126 (7%)

Query: 28  VYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSN-------AFLGFGPEQSYFVVELTY 80
           +     +   + +Y   FG         P+ K          + L      S+ V +++ 
Sbjct: 12  LVEAQKVGDAVTFYKSAFGAIESGHSLYPKRKLDQELPHVLSSELNLA-GSSFVVCDVSS 70

Query: 81  NYGVTSYDIGTGFGHLAIATEDVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGY 140
             G ++           + T+D    V      G          +        V DP G 
Sbjct: 71  LPGFSTAKSEGSGVTFLLGTKDAEAAVAKAVDAGAVKVEVTEA-EVELGFKGKVTDPFGV 129

Query: 141 IFELIQ 146
            +   +
Sbjct: 130 TWIFAE 135

>d1ecsa_ d.32.1.2 (A:) Bleomycin resistance protein, BRP {Klebsiella pneumoniae [TaxId: 573]} Length = 120

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Bleomycin resistance protein, BRP
species: Klebsiella pneumoniae [TaxId: 573]

 Score = 46.5 bits (109), Expect = 2e-07
 Identities = 20/124 (16%), Positives = 33/124 (26%), Gaps = 20/124 (16%)

Query: 30  RVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTSYDI 89
              D D T  +Y    G  +              F   G         +   +     D 
Sbjct: 9   PSRDFDSTAAFYER-LGFGI-------------VFRDAGWMILQRGDLMLEFFAHPGLDP 54

Query: 90  GTGFGHLAIATEDVYKMVENIRAKGGNVTREPGPLKGMTTH------FAFVKDPDGYIFE 143
              +    +  +D+ +     ++ G   T    P              A + DPDG +  
Sbjct: 55  LASWFSCCLRLDDLAEFYRQCKSVGIQETSSGYPRIHAPELQGWGGTMAALVDPDGTLLR 114

Query: 144 LIQR 147
           LIQ 
Sbjct: 115 LIQN 118

>d1t47a2 d.32.1.3 (A:179-377) 4-hydroxyphenylpyruvate dioxygenase, HppD {Streptomyces avermitilis [TaxId: 33903]} Length = 199

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Streptomyces avermitilis [TaxId: 33903]

 Score = 45.0 bits (106), Expect = 3e-06
 Identities = 17/108 (15%), Positives = 35/108 (32%), Gaps = 13/108 (12%)

Query: 26  HAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYF------VVELT 79
             V   G ++  + +Y +  G   +++    +     + L               + E  
Sbjct: 12  GNVEL-GRMNEWVGFYNKVMGFTNMKEFVGDDIATEYSALMSKVVADGTLKVKFPINEPA 70

Query: 80  YNYGVT------SYDIGTGFGHLAIATEDVYKMVENIRAKGGNVTREP 121
                +       +  G G  H+A+ T D+ + V  +RA G      P
Sbjct: 71  LAKKKSQIDEYLEFYGGAGVQHIALNTGDIVETVRTMRAAGVQFLDTP 118

>d1jifa_ d.32.1.2 (A:) Bleomycin resistance protein, BRP {Streptomyces verticillus [TaxId: 29309]} Length = 122

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Bleomycin resistance protein, BRP
species: Streptomyces verticillus [TaxId: 29309]

 Score = 43.6 bits (101), Expect = 3e-06
 Identities = 14/130 (10%), Positives = 26/130 (20%), Gaps = 20/130 (15%)

Query: 21  KRRLLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTY 80
           K      V    D+   + ++ +  G E                            ++  
Sbjct: 3   KFLGAVPVLTAVDVPANVSFWVDTLGFEKDFGDR--------------DFAGVRRGDIRL 48

Query: 81  NYGVTSYDIGTGFGHLAIATEDVYKMVENIRAKGGNVTREPGPLKGMTT------HFAFV 134
           +   T + I        I   D   + E           +                   V
Sbjct: 49  HISRTEHQIVADNTSAWIEVTDPDALHEEWARAVSTDYADTSGPAMTPVGESPAGREFAV 108

Query: 135 KDPDGYIFEL 144
           +DP G     
Sbjct: 109 RDPAGNCVHF 118

>d1kw3b2 d.32.1.3 (B:133-288) 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme) {Pseudomonas sp. [TaxId: 306]} Length = 156

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme)
species: Pseudomonas sp. [TaxId: 306]

 Score = 42.8 bits (100), Expect = 7e-06
 Identities = 21/119 (17%), Positives = 37/119 (31%), Gaps = 9/119 (7%)

Query: 26  HAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVT 85
           H V  V D  + + +YTE  G  L    D+     ++    F            +   + 
Sbjct: 13  HFVRCVPDTAKAMAFYTEVLGFVLSDIIDIQMGPETSVPAHF-----LHCNGRHHTIALA 67

Query: 86  SYDIGTGFGHLAIAT---EDVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYI 141
           ++ I     H  +     +DV    + + A G   +   G      T   +   P   I
Sbjct: 68  AFPIPKRIHHFMLQANTIDDVGYAFDRLDAAGRITS-LLGRHTNDQTLSFYADTPSPMI 125

>d1sqia2 d.32.1.3 (A:157-366) 4-hydroxyphenylpyruvate dioxygenase, HppD {Human (Homo sapiens) [TaxId: 9606]} Length = 210

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.4 bits (102), Expect = 1e-05
 Identities = 17/114 (14%), Positives = 36/114 (31%), Gaps = 14/114 (12%)

Query: 22  RRLLHAVYRV--GDLDRTIKYYTECFGMELLRKRDVPEEK------YSNAFLGFGPEQSY 73
             + H V      +++   ++Y +          D  +         S     +      
Sbjct: 23  EIIDHIVGNQPDQEMESASEWYLKNLQFHRFWSVDDTQVHTEYSSLRSIVVANYEESIKM 82

Query: 74  FVVELTYNYGVT------SYDIGTGFGHLAIATEDVYKMVENIRAKGGNVTREP 121
            + E       +       Y+ G G  H+A+ TED+   + ++R +G      P
Sbjct: 83  PINEPAPGRKKSQIQEYVDYNGGAGVQHIALRTEDIITTIRHLRERGMEFLAVP 136

>d1sqda2 d.32.1.3 (A:181-410) 4-hydroxyphenylpyruvate dioxygenase, HppD {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 230

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 42.0 bits (98), Expect = 3e-05
 Identities = 21/106 (19%), Positives = 39/106 (36%), Gaps = 13/106 (12%)

Query: 22  RRLLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQS------YFV 75
           RRL HAV  V +L   + Y     G     +    +   + + L      S        +
Sbjct: 21  RRLDHAVGNVPELGPALTYVAGFTGFHQFAEFTADDVGTAESGLNSAVLASNDEMVLLPI 80

Query: 76  VEL-------TYNYGVTSYDIGTGFGHLAIATEDVYKMVENIRAKG 114
            E        +       ++ G G  HLA+ +ED+++ +  +R + 
Sbjct: 81  NEPVHGTKRKSQIQTYLEHNEGAGLQHLALMSEDIFRTLREMRKRS 126

>d1u6la_ d.32.1.7 (A:) Hypothetical protein PA1353 {Pseudomonas aeruginosa [TaxId: 287]} Length = 137

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: 3-demethylubiquinone-9 3-methyltransferase
domain: Hypothetical protein PA1353
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 39.0 bits (90), Expect = 1e-04
 Identities = 16/122 (13%), Positives = 37/122 (30%), Gaps = 10/122 (8%)

Query: 32  GDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTSYDIGT 91
           G+       Y +  G  L       +            ++      +  ++ + + D   
Sbjct: 12  GNCREAFSCYHQHLGGTLEAMLPFGDSPECGDIPADWKDKIMHARLVVGSFALMASDNHP 71

Query: 92  GFGH---------LAIATEDVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIF 142
            + +         L + ++   + + N  A+GG+V    GP       F    D  G  +
Sbjct: 72  AYPYEGIKGCSISLNVDSKAEAERLFNALAEGGSVQMPLGP-TFWAASFGMFTDRFGVAW 130

Query: 143 EL 144
            +
Sbjct: 131 MV 132

>d1cjxa1 d.32.1.3 (A:4-153) 4-hydroxyphenylpyruvate dioxygenase, HppD {Pseudomonas fluorescens [TaxId: 294]} Length = 150

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Pseudomonas fluorescens [TaxId: 294]

 Score = 36.9 bits (85), Expect = 8e-04
 Identities = 17/134 (12%), Positives = 33/134 (24%), Gaps = 11/134 (8%)

Query: 26  HAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVT 85
              +           + E  G        V   +  N  L +   +   ++    N   +
Sbjct: 12  FIEFASPTPGTLEPIF-EIMGFTK-----VATHRSKNVHL-YRQGEINLILNNEPNSIAS 64

Query: 86  SY--DIGTGFGHLAIATEDVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFE 143
            +  + G     +A   +D  K        G            M  +   +K   G    
Sbjct: 65  YFAAEHGPSVCGMAFRVKDSQKAYNRALELGAQPIHI--DTGPMELNLPAIKGIGGAPLY 122

Query: 144 LIQRGPTPEPLCQV 157
           LI R      +  +
Sbjct: 123 LIDRFGEGSSIYDI 136

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	291
d1f9za_	135	Glyoxalase I (lactoylglutathione lyase) {Escherich	99.83
d1f9za_	135	Glyoxalase I (lactoylglutathione lyase) {Escherich	99.83
d2i7ra1	115	Hypotheical protein SP0731 {Streptococcus pneumoni	99.82
d1zswa1	144	Hypothetical protein BC1024 {Bacillus cereus [TaxI	99.81
d1ss4a_	149	Hypothetical protein BC1747 {Bacillus cereus (stra	99.8
d2i7ra1	115	Hypotheical protein SP0731 {Streptococcus pneumoni	99.79
d1mpya2	162	Catechol 2,3-dioxygenase (metapyrocatechase) {Pseu	99.79
d1mpya2	162	Catechol 2,3-dioxygenase (metapyrocatechase) {Pseu	99.78
d1jc4a_	145	Methylmalonyl-CoA epimerase {Propionibacterium she	99.78
d1ss4a_	149	Hypothetical protein BC1747 {Bacillus cereus (stra	99.77
d1zswa1	144	Hypothetical protein BC1024 {Bacillus cereus [TaxI	99.77
d1zswa2	170	Hypothetical protein BC1024 {Bacillus cereus [TaxI	99.77
d1r9ca_	130	Fosfomycin resistance protein FosX {Mesorhizobium	99.75
d1f1ua2	176	Homoprotocatechuate 2,3-dioxygenase {Arthrobacter	99.75
d1twua_	137	Hypothetical protein YycE {Bacillus subtilis [TaxI	99.75
d1qipa_	176	Glyoxalase I (lactoylglutathione lyase) {Human (Ho	99.75
d2c21a1	139	Glyoxalase I (lactoylglutathione lyase) {Leishmani	99.75
d1lgta1	131	2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzy	99.75
d1sqia1	149	4-hydroxyphenylpyruvate dioxygenase, HppD {Human (	99.74
d1f1ua1	146	Homoprotocatechuate 2,3-dioxygenase {Arthrobacter	99.74
d1jc4a_	145	Methylmalonyl-CoA epimerase {Propionibacterium she	99.74
d1qipa_	176	Glyoxalase I (lactoylglutathione lyase) {Human (Ho	99.74
d1sqda1	167	4-hydroxyphenylpyruvate dioxygenase, HppD {Mouse-e	99.74
d1zswa2	170	Hypothetical protein BC1024 {Bacillus cereus [TaxI	99.73
d1npba_	140	Fosfomycin resistance protein A (FosA) {Serratia m	99.73
d1t47a1	163	4-hydroxyphenylpyruvate dioxygenase, HppD {Strepto	99.73
d1kw3b1	132	2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzy	99.73
d1f1ua1	146	Homoprotocatechuate 2,3-dioxygenase {Arthrobacter	99.73
d1twua_	137	Hypothetical protein YycE {Bacillus subtilis [TaxI	99.72
d1sp8a1	172	4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Z	99.72
d1kw3b2	156	2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzy	99.71
d1nkia_	134	Fosfomycin resistance protein A (FosA) {Pseudomona	99.71
d1xqaa_	113	Hypothetical protein BC3580 {Bacillus cereus [TaxI	99.71
d1r9ca_	130	Fosfomycin resistance protein FosX {Mesorhizobium	99.71
d2c21a1	139	Glyoxalase I (lactoylglutathione lyase) {Leishmani	99.7
d1mpya1	145	Catechol 2,3-dioxygenase (metapyrocatechase) {Pseu	99.7
d1xqaa_	113	Hypothetical protein BC3580 {Bacillus cereus [TaxI	99.7
d1mpya1	145	Catechol 2,3-dioxygenase (metapyrocatechase) {Pseu	99.7
d2pjsa1	111	Uncharacterized protein Atu1953 {Agrobacterium tum	99.7
d1lgta1	131	2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzy	99.7
d1klla_	128	Mitomycin resistance protein D, MRD {Streptomyces	99.7
d2pjsa1	111	Uncharacterized protein Atu1953 {Agrobacterium tum	99.69
d1sqia1	149	4-hydroxyphenylpyruvate dioxygenase, HppD {Human (	99.69
d1kw3b1	132	2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzy	99.68
d1klla_	128	Mitomycin resistance protein D, MRD {Streptomyces	99.68
d1f1ua2	176	Homoprotocatechuate 2,3-dioxygenase {Arthrobacter	99.68
d1t47a1	163	4-hydroxyphenylpyruvate dioxygenase, HppD {Strepto	99.65
d1nkia_	134	Fosfomycin resistance protein A (FosA) {Pseudomona	99.64
d1npba_	140	Fosfomycin resistance protein A (FosA) {Serratia m	99.63
d1sp8a1	172	4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Z	99.62
d1kw3b2	156	2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzy	99.6
d1sqda1	167	4-hydroxyphenylpyruvate dioxygenase, HppD {Mouse-e	99.6
d1ecsa_	120	Bleomycin resistance protein, BRP {Klebsiella pneu	99.56
d1ecsa_	120	Bleomycin resistance protein, BRP {Klebsiella pneu	99.55
d1cjxa1	150	4-hydroxyphenylpyruvate dioxygenase, HppD {Pseudom	99.52
d1xy7a_	135	Hypothetical protein At5g48480 {Thale cress (Arabi	99.49
d1jifa_	122	Bleomycin resistance protein, BRP {Streptomyces ve	99.46
d1xy7a_	135	Hypothetical protein At5g48480 {Thale cress (Arabi	99.45
d1xrka_	120	Bleomycin resistance protein, BRP {Streptoalloteic	99.45
d1jifa_	122	Bleomycin resistance protein, BRP {Streptomyces ve	99.45
d1xrka_	120	Bleomycin resistance protein, BRP {Streptoalloteic	99.34
d1cjxa1	150	4-hydroxyphenylpyruvate dioxygenase, HppD {Pseudom	99.32
d1cjxa2	203	4-hydroxyphenylpyruvate dioxygenase, HppD {Pseudom	99.3
d1sqia2	210	4-hydroxyphenylpyruvate dioxygenase, HppD {Human (	99.24
d1cjxa2	203	4-hydroxyphenylpyruvate dioxygenase, HppD {Pseudom	99.18
d1sp8a2	224	4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Z	99.16
d1t47a2	199	4-hydroxyphenylpyruvate dioxygenase, HppD {Strepto	99.15
d1t47a2	199	4-hydroxyphenylpyruvate dioxygenase, HppD {Strepto	99.13
d1u6la_	137	Hypothetical protein PA1353 {Pseudomonas aeruginos	99.1
d1sqia2	210	4-hydroxyphenylpyruvate dioxygenase, HppD {Human (	99.06
d1u6la_	137	Hypothetical protein PA1353 {Pseudomonas aeruginos	99.03
d1sp8a2	224	4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Z	98.99
d1sqda2	230	4-hydroxyphenylpyruvate dioxygenase, HppD {Mouse-e	98.92
d1u7ia_	134	Hypothetical protein PA1358 {Pseudomonas aeruginos	98.79
d1u7ia_	134	Hypothetical protein PA1358 {Pseudomonas aeruginos	98.76
d1sqda2	230	4-hydroxyphenylpyruvate dioxygenase, HppD {Mouse-e	98.67
d1tsja_	129	Hypothetical protein MW1090 {Staphylococcus aureus	98.41
d1tsja_	129	Hypothetical protein MW1090 {Staphylococcus aureus	98.19
d1u69a_	156	Hypothetical protein PA2721 {Pseudomonas aeruginos	96.97
d1u69a_	156	Hypothetical protein PA2721 {Pseudomonas aeruginos	96.72

>d1f9za_ d.32.1.1 (A:) Glyoxalase I (lactoylglutathione lyase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Glyoxalase I (lactoylglutathione lyase)
domain: Glyoxalase I (lactoylglutathione lyase)
species: Escherichia coli [TaxId: 562]

Probab=99.83  E-value=5.8e-20  Score=135.40  Aligned_cols=132  Identities=46%  Similarity=0.808  Sum_probs=95.0

Q ss_pred             CceeeeeeeCCchhhHHHHHHhcCCeeeeeccCcccceeeeeeccCCCCcceEEEEeEecCceeeccCceeeEEEEEecC
Q 022831          153 PLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAISTDD  232 (291)
Q Consensus       153 ~~~hv~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~~hia~~v~d  232 (291)
                      ++.|+.|+|+|+++|.+||+++|||++..........+.............................+.+..|+++.+++
T Consensus         2 kl~Hv~i~V~Dl~~s~~FY~~iLG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (135)
T d1f9za_           2 RLLHTMLRVGDLQRSIDFYTKVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNWGVDKYELGTAYGHIALSVDN   81 (135)
T ss_dssp             CEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEETTTTEEEEEEESSCTTTSCEEEEEEETTCCCCCCCSSEEEEEEECSC
T ss_pred             cceEEEEEcCCHHHHHHHHHHHhCCEEEeeccccccceeeeeeccceeeeccccccccccccccccccccceeeccchHH
Confidence            58999999999999999999999999887755444333333333322222233333332322223345578999999999


Q ss_pred             hHHHHHHHHHHHHhhCCeeeecccccCCCCceEEEEECCCCCeEEEEechhhhhhh
Q 022831          233 VYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNEDFLKEL  288 (291)
Q Consensus       233 i~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~~~~~~~  288 (291)
                      ++++.+++    +++|..+...|...+..+.+++||+|||||+|||+|+++..+.+
T Consensus        82 ~~~~~~~~----~~~g~~~~~~~~~~~~~~~~~~~~~DPdG~~iEl~q~~~~~~~~  133 (135)
T d1f9za_          82 AAEACEKI----RQNGGNVTREAGPVKGGTTVIAFVEDPDGYKIELIEEKDAGRGL  133 (135)
T ss_dssp             HHHHHHHH----HHTTCEEEEEEEECTTSCCEEEEEECTTSCEEEEEEC-------
T ss_pred             HHHHHHHH----HHcCCCeecCCccccCCCeEEEEEECCCCCEEEEEECCCccccC
Confidence            99999999    99999999999888877788899999999999999999877654

>d1f9za_ d.32.1.1 (A:) Glyoxalase I (lactoylglutathione lyase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Glyoxalase I (lactoylglutathione lyase)
domain: Glyoxalase I (lactoylglutathione lyase)
species: Escherichia coli [TaxId: 562]

Probab=99.83  E-value=1.9e-19  Score=132.63  Aligned_cols=129  Identities=54%  Similarity=0.972  Sum_probs=97.1

Q ss_pred             cceeeEEEEeCCHHHHHHHHHHhcCCEEEEEeccCCCceeeEEeeccCCCcceEEEeeecCCCCcccCCCCceEEEEEEC
Q 022831           22 RRLLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHLAIATE  101 (291)
Q Consensus        22 ~~i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~g~~~~~i~~~v~  101 (291)
                      |+|.|+.|.|+|++++++||+++|||++...............+........................+.+..++++.++
T Consensus         1 Mkl~Hv~i~V~Dl~~s~~FY~~iLG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (135)
T d1f9za_           1 MRLLHTMLRVGDLQRSIDFYTKVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNWGVDKYELGTAYGHIALSVD   80 (135)
T ss_dssp             CCEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEETTTTEEEEEEESSCTTTSCEEEEEEETTCCCCCCCSSEEEEEEECS
T ss_pred             CcceEEEEEcCCHHHHHHHHHHHhCCEEEeeccccccceeeeeeccceeeeccccccccccccccccccccceeeccchH
Confidence            68999999999999999999999999998776655554444444433323333333333333334445557889999999


Q ss_pred             CHHHHHHHHHHcCCeeeeCCccCCCCceEEEEEECCCCcEEEEEecCCC
Q 022831          102 DVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFELIQRGPT  150 (291)
Q Consensus       102 d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dP~G~~iel~~~~~~  150 (291)
                      +++++.+++.++|..+..+|...+++...++|++||||+.|||++....
T Consensus        81 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~DPdG~~iEl~q~~~~  129 (135)
T d1f9za_          81 NAAEACEKIRQNGGNVTREAGPVKGGTTVIAFVEDPDGYKIELIEEKDA  129 (135)
T ss_dssp             CHHHHHHHHHHTTCEEEEEEEECTTSCCEEEEEECTTSCEEEEEEC---
T ss_pred             HHHHHHHHHHHcCCCeecCCccccCCCeEEEEEECCCCCEEEEEECCCc
Confidence            9999999999999999888877777666678999999999999997754

>d2i7ra1 d.32.1.2 (A:1-115) Hypotheical protein SP0731 {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Hypotheical protein SP0731
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=99.82  E-value=1.2e-19  Score=130.32  Aligned_cols=115  Identities=17%  Similarity=0.111  Sum_probs=89.4

Q ss_pred             cceeeEEEEeCCHHHHHHHHHHhcCCEEEEEeccCCCceeeEEeeccCCCcceEEEeeecCCCCcccCCCCceEEEEEEC
Q 022831           22 RRLLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHLAIATE  101 (291)
Q Consensus        22 ~~i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~g~~~~~i~~~v~  101 (291)
                      |+|+|+.|.|+|++++.+||+++||+++....+    +  .+.+..++    ..+.+......+....+ ...+++|.|+
T Consensus         1 m~l~~i~i~V~di~~a~~FYe~~lg~~~~~~~~----~--~~~~~~g~----~~l~l~~~~~~~~~~~~-~~~~~~f~v~   69 (115)
T d2i7ra1           1 MNLNQLDIIVSNVPQVCADLEHILDKKADYAND----G--FAQFTIGS----HCLMLSQNHLVPLENFQ-SGIIIHIEVE   69 (115)
T ss_dssp             CEEEEEEEECSCHHHHHHHHHHHHTSCCSEEET----T--EEEEEETT----EEEEEESSCSSSCCCCC-SCEEEEEECS
T ss_pred             CcceEEEEEECCHHHHHHHHHHhhCCceeeecC----C--eEEEEEcC----ceeeeeecccCCCCCCC-cceEEEEEEC
Confidence            579999999999999999999999999866433    1  45566542    23444443332222233 3357999999


Q ss_pred             CHHHHHHHHHHcCCeeeeCCccCCCCceEEEEEECCCCcEEEEEecC
Q 022831          102 DVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFELIQRG  148 (291)
Q Consensus       102 d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dP~G~~iel~~~~  148 (291)
                      |+++++++|.++|+++..+|...++|.+. ++++|||||.||+.+.+
T Consensus        70 D~d~~~~~l~~~G~~i~~~~~~~~~g~~~-~~~~DPdGn~ie~~~~k  115 (115)
T d2i7ra1          70 DVDQNYKRLNELGIKVLHGPTVTDWGTES-LLVQGPAGLVLDFYRMK  115 (115)
T ss_dssp             CHHHHHHHHHHHTCCEEEEEEECTTSCEE-EEEECGGGCEEEEEECC
T ss_pred             CHHHHHHHHHhhccccccceEEeeCCeEE-EEEECCCCCEEEEEEeC
Confidence            99999999999999999999888888764 88999999999998753

>d1zswa1 d.32.1.10 (A:1-144) Hypothetical protein BC1024 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: BC1024-like
domain: Hypothetical protein BC1024
species: Bacillus cereus [TaxId: 1396]

Probab=99.81  E-value=1.5e-18  Score=129.56  Aligned_cols=129  Identities=9%  Similarity=0.057  Sum_probs=92.2

Q ss_pred             CCccceeeEEEEeCCHHHHHHHHHHhcCCEEEEEeccCCC-ceeeEEeeccCCCcceEEEeeecCCCCcccCCC-CceEE
Q 022831           19 KDKRRLLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEE-KYSNAFLGFGPEQSYFVVELTYNYGVTSYDIGT-GFGHL   96 (291)
Q Consensus        19 ~~~~~i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~g~-~~~~i   96 (291)
                      ..|.+|+||+|.|+|++++++||+++|||++..+....+. .....+++.........+.+...........+. ++.|+
T Consensus         2 ~~i~gl~Hv~l~v~Dl~~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~Hi   81 (144)
T d1zswa1           2 YEIKGHHHISMVTKNANENNHFYKNVLGLRRVKMTVNQDDPSMYHLFYGDKTGSPGTELSFFEIPLVGRTYRGTNAITRI   81 (144)
T ss_dssp             SCCCSEEEEEEEESCHHHHHHHHHTTTCCEEEEEEEETTEEEEEEEEEESTTCCTTSEEEEEECTTCCBCBCCBSEEEEE
T ss_pred             CcccceeeEEEEeCCHHHHHHHHHHHhCCeeEeeeccccCCceeEEEecccccceeeEEeecccccccCCccCCCceeEE
Confidence            3689999999999999999999999999999876544332 223334443333444455555443333333333 58899


Q ss_pred             EEEECC---HHHHHHHHHHcCCeeeeCCccCCCCceEEEEEECCCCcEEEEEecCCC
Q 022831           97 AIATED---VYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFELIQRGPT  150 (291)
Q Consensus        97 ~~~v~d---~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dP~G~~iel~~~~~~  150 (291)
                      +|.|+|   ++++.++|.+.|+.+... ... ++ ...+||+||||+.|||++..+.
T Consensus        82 af~v~~~~~l~~~~~~l~~~gv~~~~~-~~~-~~-~~~~yf~DPdG~~iEl~~~~~~  135 (144)
T d1zswa1          82 GLLVPSEDSLHYWKERFEKFDVKHSEM-TTY-AN-RPALQFEDAEGLRLVLLVSNGE  135 (144)
T ss_dssp             EEEESCHHHHHHHHHHHHHTTCEECCS-EEE-TT-EEEEEEECTTCCEEEEEECTTC
T ss_pred             EEecCCchhHHHHhhhhhccceeeeCc-ccc-CC-eEEEEEECCCCCEEEEEEeCCC
Confidence            999998   778899999999987543 333 33 3358999999999999987653

>d1ss4a_ d.32.1.6 (A:) Hypothetical protein BC1747 {Bacillus cereus (strain ATCC 14579 / DSM 31) [TaxId: 226900]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Hypothetical protein BC1747
domain: Hypothetical protein BC1747
species: Bacillus cereus (strain ATCC 14579 / DSM 31) [TaxId: 226900]

Probab=99.80  E-value=8.9e-19  Score=131.51  Aligned_cols=125  Identities=17%  Similarity=0.275  Sum_probs=91.5

Q ss_pred             CCccceeeEEEEeCCHHHHHHHHHHhcCCEEEEEeccC-----------CCceeeEEeeccCCCcceEEEeee---cCCC
Q 022831           19 KDKRRLLHAVYRVGDLDRTIKYYTECFGMELLRKRDVP-----------EEKYSNAFLGFGPEQSYFVVELTY---NYGV   84 (291)
Q Consensus        19 ~~~~~i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~l~l~~---~~~~   84 (291)
                      ..+++|+|++|.|+|++++.+||++ |||++..+....           .......++......  ..+.+.+   ....
T Consensus         5 ~~~~ri~Hv~i~v~Dle~s~~FY~~-LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--~~~~l~~~~~~~~~   81 (149)
T d1ss4a_           5 NKLLRMDNVSIVVESLDNAISFFEE-IGLNLEGRANVEGEWAGRVTGLGSQCVEIAMMVTPDGH--SRIELSRFLTPPTI   81 (149)
T ss_dssp             CCEEEEEEEEEECSCHHHHHHHHHH-HTCEEEEEEEECSHHHHHHHSCCSCEEEEEEEECTTSS--CEEEEEEEEESCCC
T ss_pred             CCCCEEeEEEEEeCCHHHHHHHHHH-cCCcEeeeeccceeeeeeeeccCCCceeEEEEeecccc--eEEEEEeeccccCc
Confidence            4689999999999999999999999 999998764322           123345555543322  2333322   1111


Q ss_pred             Cc----ccCCCCceEEEEEECCHHHHHHHHHHcCCeeeeCCccCCCCceEEEEEECCCCcEEEEEec
Q 022831           85 TS----YDIGTGFGHLAIATEDVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFELIQR  147 (291)
Q Consensus        85 ~~----~~~g~~~~~i~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dP~G~~iel~~~  147 (291)
                      ..    .....|+.|++|.|+|+++++++|+++|+++..+|....++.+ .+|++||+|+.|||+|.
T Consensus        82 ~~~~~~~~~~~g~~hi~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~~~~-~~~~~DPdG~~iEl~e~  147 (149)
T d1ss4a_          82 ADHRTAPVNALGYLRVMFTVEDIDEMVSRLTKHGAELVGEVVQYENSYR-LCYIRGVEGILIGLAEE  147 (149)
T ss_dssp             CBCTTCCSSSBEEEEEEEEESCHHHHHHHHHHTTCEESSCCEEETTTEE-EEEEECGGGCEEEEEEE
T ss_pred             ccccccCCCCcceeEEEEeechhHHHHHHHHHCCCeEccCCeECCCCeE-EEEEECCCCCEEEEEEc
Confidence            11    1123478899999999999999999999999888877666554 58999999999999985

>d2i7ra1 d.32.1.2 (A:1-115) Hypotheical protein SP0731 {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Hypotheical protein SP0731
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=99.79  E-value=5.1e-19  Score=127.00  Aligned_cols=114  Identities=19%  Similarity=0.111  Sum_probs=86.9

Q ss_pred             CceeeeeeeCCchhhHHHHHHhcCCeeeeeccCcccceeeeeeccCCCCcceEEEEeEecCceeeccCceeeEEEEEecC
Q 022831          153 PLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAISTDD  232 (291)
Q Consensus       153 ~~~hv~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~~hia~~v~d  232 (291)
                      +|.|+.|.|+|++++.+||+++||+++....+    .+.  .+..+    ...|.+......+....+.| .+++|.|+|
T Consensus         2 ~l~~i~i~V~di~~a~~FYe~~lg~~~~~~~~----~~~--~~~~g----~~~l~l~~~~~~~~~~~~~~-~~~~f~v~D   70 (115)
T d2i7ra1           2 NLNQLDIIVSNVPQVCADLEHILDKKADYAND----GFA--QFTIG----SHCLMLSQNHLVPLENFQSG-IIIHIEVED   70 (115)
T ss_dssp             EEEEEEEECSCHHHHHHHHHHHHTSCCSEEET----TEE--EEEET----TEEEEEESSCSSSCCCCCSC-EEEEEECSC
T ss_pred             cceEEEEEECCHHHHHHHHHHhhCCceeeecC----CeE--EEEEc----CceeeeeecccCCCCCCCcc-eEEEEEECC
Confidence            37899999999999999999999999765422    233  23322    24555554333222122233 579999999


Q ss_pred             hHHHHHHHHHHHHhhCCeeeecccccCCCCceEEEEECCCCCeEEEEech
Q 022831          233 VYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNE  282 (291)
Q Consensus       233 i~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~  282 (291)
                      ++++++++    +++|+++..+|...++ +.+.+||+|||||.|||++.+
T Consensus        71 ~d~~~~~l----~~~G~~i~~~~~~~~~-g~~~~~~~DPdGn~ie~~~~k  115 (115)
T d2i7ra1          71 VDQNYKRL----NELGIKVLHGPTVTDW-GTESLLVQGPAGLVLDFYRMK  115 (115)
T ss_dssp             HHHHHHHH----HHHTCCEEEEEEECTT-SCEEEEEECGGGCEEEEEECC
T ss_pred             HHHHHHHH----HhhccccccceEEeeC-CeEEEEEECCCCCEEEEEEeC
Confidence            99999999    9999999999988875 568999999999999999864

>d1mpya2 d.32.1.3 (A:146-307) Catechol 2,3-dioxygenase (metapyrocatechase) {Pseudomonas putida, mt2 [TaxId: 303]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Catechol 2,3-dioxygenase (metapyrocatechase)
species: Pseudomonas putida, mt2 [TaxId: 303]

Probab=99.79  E-value=1.1e-18  Score=132.96  Aligned_cols=122  Identities=13%  Similarity=0.172  Sum_probs=90.9

Q ss_pred             CCceeeeeeeCCchhhHHHHHHhcCCeeeeeccCcccceeeeeeccCCCCcceEEEEeEecCceeeccCceeeEEEEEec
Q 022831          152 EPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAISTD  231 (291)
Q Consensus       152 ~~~~hv~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~~hia~~v~  231 (291)
                      .+++||.|.|+|++++++||+++|||++.++...........+...+....  ...+..      .+..++++|++|.+.
T Consensus         4 ~rldHv~l~v~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~------~~~~~~~~h~~~~~~   75 (162)
T d1mpya2           4 VRFDHALMYGDELPATYDLFTKVLGFYLAEQVLDENGTRVAQFLSLSTKAH--DVAFIH------HPEKGRLHHVSFHLE   75 (162)
T ss_dssp             CEEEEEEEEESCHHHHHHHHHHTTCCEEEEEEECTTCCEEEEEEESSSBSC--SEEEEE------CSSSSEEEEEEEECS
T ss_pred             ccccEEEEECCCHHHHHHHHHHccCCEEEEEEccccccceeeeeecccccc--cccccc------cCCCCccceeEEEEe
Confidence            469999999999999999999999999987765555444444444332221  122211      122457899999998


Q ss_pred             ChH---HHHHHHHHHHHhhCCeeeecccccCCCCceEEEEECCCCCeEEEEechhhh
Q 022831          232 DVY---KSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNEDFL  285 (291)
Q Consensus       232 di~---~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~~~~  285 (291)
                      +++   ++.++|    ++.|+++..+|.++..++.+++||+|||||.|||+...+..
T Consensus        76 ~~~~~~~~~~~L----~~~gv~~~~~p~~~~~g~~~~~y~~DPdGn~iEl~~~~~~~  128 (162)
T d1mpya2          76 TWEDLLRAADLI----SMTDTSIDIGPTRHGLTHGKTIYFFDPSGNRNEVFCGGDYN  128 (162)
T ss_dssp             CHHHHHHHHHHH----HHHTCCEEEEEEECSSTTCEEEEEECTTSCEEEEEECCCBC
T ss_pred             eehhhhhHHHHH----HHcCCccccCccccCCCCeEEEEEECCCCCEEEEEECCccc
Confidence            766   455566    99999999999887766678899999999999999875543

>d1mpya2 d.32.1.3 (A:146-307) Catechol 2,3-dioxygenase (metapyrocatechase) {Pseudomonas putida, mt2 [TaxId: 303]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Catechol 2,3-dioxygenase (metapyrocatechase)
species: Pseudomonas putida, mt2 [TaxId: 303]

Probab=99.78  E-value=4.6e-18  Score=129.51  Aligned_cols=123  Identities=15%  Similarity=0.143  Sum_probs=92.2

Q ss_pred             CCccceeeEEEEeCCHHHHHHHHHHhcCCEEEEEeccCCCceeeEEeeccCCCcceEEEeeecCCCCcccCCCCceEEEE
Q 022831           19 KDKRRLLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHLAI   98 (291)
Q Consensus        19 ~~~~~i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~g~~~~~i~~   98 (291)
                      |..++++||.|.|+|++++++||+++|||++..+...........+...+...... . +....      ...+..|++|
T Consensus         1 m~~~rldHv~l~v~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~------~~~~~~h~~~   72 (162)
T d1mpya2           1 MAAVRFDHALMYGDELPATYDLFTKVLGFYLAEQVLDENGTRVAQFLSLSTKAHDV-A-FIHHP------EKGRLHHVSF   72 (162)
T ss_dssp             TCCCEEEEEEEEESCHHHHHHHHHHTTCCEEEEEEECTTCCEEEEEEESSSBSCSE-E-EEECS------SSSEEEEEEE
T ss_pred             CCcccccEEEEECCCHHHHHHHHHHccCCEEEEEEccccccceeeeeecccccccc-c-ccccC------CCCccceeEE
Confidence            56789999999999999999999999999998776655555444554433222211 1 11111      1236889999


Q ss_pred             EECCHH---HHHHHHHHcCCeeeeCCccCCCCceEEEEEECCCCcEEEEEecCC
Q 022831           99 ATEDVY---KMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFELIQRGP  149 (291)
Q Consensus        99 ~v~d~~---~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dP~G~~iel~~~~~  149 (291)
                      .+.+++   +++++|+++|+++..+|.....+...++|++|||||.|||+....
T Consensus        73 ~~~~~~~~~~~~~~L~~~gv~~~~~p~~~~~g~~~~~y~~DPdGn~iEl~~~~~  126 (162)
T d1mpya2          73 HLETWEDLLRAADLISMTDTSIDIGPTRHGLTHGKTIYFFDPSGNRNEVFCGGD  126 (162)
T ss_dssp             ECSCHHHHHHHHHHHHHHTCCEEEEEEECSSTTCEEEEEECTTSCEEEEEECCC
T ss_pred             EEeeehhhhhHHHHHHHcCCccccCccccCCCCeEEEEEECCCCCEEEEEECCc
Confidence            998755   778999999999887777766666667999999999999997654

>d1jc4a_ d.32.1.4 (A:) Methylmalonyl-CoA epimerase {Propionibacterium shermanii [TaxId: 1752]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Methylmalonyl-CoA epimerase
domain: Methylmalonyl-CoA epimerase
species: Propionibacterium shermanii [TaxId: 1752]

Probab=99.78  E-value=2.1e-18  Score=128.69  Aligned_cols=129  Identities=22%  Similarity=0.313  Sum_probs=92.6

Q ss_pred             CCccceeeEEEEeCCHHHHHHHHHHhcCCEEEEEeccCCCceeeEEeec--cCCCcceEEEeeecCCCCc--------cc
Q 022831           19 KDKRRLLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGF--GPEQSYFVVELTYNYGVTS--------YD   88 (291)
Q Consensus        19 ~~~~~i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~l~~~~~~~~--------~~   88 (291)
                      .|+++|+||+|.|+|++++++||+++||+++......+..+....+...  ........+++.+......        ..
T Consensus         3 ~m~~~i~Hi~i~v~Dl~~a~~fY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~~~~~~~~~~~~~~~~~   82 (145)
T d1jc4a_           3 DLFICIDHVAYACPDADEASKYYQETFGWHELHREENPEQGVVEIMMAPAAKLTEHMTQVQVMAPLNDESTVAKWLAKHN   82 (145)
T ss_dssp             CCCSEEEEEEEECSCHHHHHHHHHHHHCCEEEEEEEETTTTEEEEEEESSSSCCTTCCEEEEEEESSTTSHHHHHHHHTT
T ss_pred             ccceEEeEEEEEeCCHHHHHHHHHhhccCceeeeeeecccceEEEeeeceeccccccchhhhhhhhcccCcccccccccC
Confidence            5799999999999999999999999999999876655554433333321  1112334555554322111        12


Q ss_pred             CCCCceEEEEEECCHHHHHHHHHHcCCeeeeC-CccCCCCceEEEEE--ECCCCcEEEEEecC
Q 022831           89 IGTGFGHLAIATEDVYKMVENIRAKGGNVTRE-PGPLKGMTTHFAFV--KDPDGYIFELIQRG  148 (291)
Q Consensus        89 ~g~~~~~i~~~v~d~~~~~~~l~~~G~~~~~~-~~~~~~g~~~~~~~--~dP~G~~iel~~~~  148 (291)
                      .+.|+.|+||.|+|+++++++|+++|+++..+ +....+|.. .+|+  +||+|++|||+|.+
T Consensus        83 ~~~g~~Hia~~v~di~~~~~~l~~~Gv~~~~~~~~~~~~g~~-~~f~~p~dp~G~~iEl~e~p  144 (145)
T d1jc4a_          83 GRAGLHHMAWRVDDIDAVSATLRERGVQLLYDEPKLGTGGNR-INFMHPKSGKGVLIELTQYP  144 (145)
T ss_dssp             TCCEEEEEEEECSCHHHHHHHHHHHTCCBSCSSCEECSSSCE-EEEBCGGGGTTSCEEEEECC
T ss_pred             CCCcceEEEEecchHHHHHHHHHHCCCEEeCCCceECCCCCE-EEEEeccCCCCeEEEEEECC
Confidence            34589999999999999999999999997654 344445544 3555  79999999999974

>d1ss4a_ d.32.1.6 (A:) Hypothetical protein BC1747 {Bacillus cereus (strain ATCC 14579 / DSM 31) [TaxId: 226900]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Hypothetical protein BC1747
domain: Hypothetical protein BC1747
species: Bacillus cereus (strain ATCC 14579 / DSM 31) [TaxId: 226900]

Probab=99.77  E-value=2.9e-18  Score=128.60  Aligned_cols=122  Identities=15%  Similarity=0.235  Sum_probs=89.7

Q ss_pred             CCceeeeeeeCCchhhHHHHHHhcCCeeeeeccCc-----------ccceeeeeeccCCCCcceEEEEeEe---cCcee-
Q 022831          152 EPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSP-----------ELKCALAMLGYAEEDQTTVLELAYS---YGVTE-  216 (291)
Q Consensus       152 ~~~~hv~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~l~l~~~---~~~~~-  216 (291)
                      .+++|++|.|+|++++.+||++ |||++..+....           +....+.++...+.  ...+++...   .+... 
T Consensus         8 ~ri~Hv~i~v~Dle~s~~FY~~-LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~--~~~~~l~~~~~~~~~~~~   84 (149)
T d1ss4a_           8 LRMDNVSIVVESLDNAISFFEE-IGLNLEGRANVEGEWAGRVTGLGSQCVEIAMMVTPDG--HSRIELSRFLTPPTIADH   84 (149)
T ss_dssp             EEEEEEEEECSCHHHHHHHHHH-HTCEEEEEEEECSHHHHHHHSCCSCEEEEEEEECTTS--SCEEEEEEEEESCCCCBC
T ss_pred             CEEeEEEEEeCCHHHHHHHHHH-cCCcEeeeeccceeeeeeeeccCCCceeEEEEeeccc--ceEEEEEeeccccCcccc
Confidence            4689999999999999999998 999987653221           22234455554332  334444331   11111 


Q ss_pred             ---eccCceeeEEEEEecChHHHHHHHHHHHHhhCCeeeecccccCCCCceEEEEECCCCCeEEEEec
Q 022831          217 ---YTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDN  281 (291)
Q Consensus       217 ---~~~~~g~~hia~~v~di~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iel~~~  281 (291)
                         .....|++|++|.|+|++++++++    ++.|+++..+|...++ +.+.+|++||||+.|||+|+
T Consensus        85 ~~~~~~~~g~~hi~~~v~d~~~~~~~l----~~~G~~~~~~~~~~~~-~~~~~~~~DPdG~~iEl~e~  147 (149)
T d1ss4a_          85 RTAPVNALGYLRVMFTVEDIDEMVSRL----TKHGAELVGEVVQYEN-SYRLCYIRGVEGILIGLAEE  147 (149)
T ss_dssp             TTCCSSSBEEEEEEEEESCHHHHHHHH----HHTTCEESSCCEEETT-TEEEEEEECGGGCEEEEEEE
T ss_pred             cccCCCCcceeEEEEeechhHHHHHHH----HHCCCeEccCCeECCC-CeEEEEEECCCCCEEEEEEc
Confidence               112358999999999999999999    9999999888876654 56789999999999999986

>d1zswa1 d.32.1.10 (A:1-144) Hypothetical protein BC1024 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: BC1024-like
domain: Hypothetical protein BC1024
species: Bacillus cereus [TaxId: 1396]

Probab=99.77  E-value=4.5e-18  Score=126.96  Aligned_cols=125  Identities=15%  Similarity=0.184  Sum_probs=88.0

Q ss_pred             CCceeeeeeeCCchhhHHHHHHhcCCeeeeeccCc-ccceeeeeeccCCCCcceEEEEeEecCcee-eccCceeeEEEEE
Q 022831          152 EPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSP-ELKCALAMLGYAEEDQTTVLELAYSYGVTE-YTKGNAYAQVAIS  229 (291)
Q Consensus       152 ~~~~hv~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~-~~~~~g~~hia~~  229 (291)
                      .+|+||+|.|+|++++.+||+++||+++..+.... .......+.+.........+.+.......+ ....++++|++|.
T Consensus         5 ~gl~Hv~l~v~Dl~~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~Hiaf~   84 (144)
T d1zswa1           5 KGHHHISMVTKNANENNHFYKNVLGLRRVKMTVNQDDPSMYHLFYGDKTGSPGTELSFFEIPLVGRTYRGTNAITRIGLL   84 (144)
T ss_dssp             CSEEEEEEEESCHHHHHHHHHTTTCCEEEEEEEETTEEEEEEEEEESTTCCTTSEEEEEECTTCCBCBCCBSEEEEEEEE
T ss_pred             cceeeEEEEeCCHHHHHHHHHHHhCCeeEeeeccccCCceeEEEecccccceeeEEeecccccccCCccCCCceeEEEEe
Confidence            56999999999999999999999999987764332 222333344433333345555554433322 2233478999999


Q ss_pred             ecC---hHHHHHHHHHHHHhhCCeeeecccccCCCCceEEEEECCCCCeEEEEechh
Q 022831          230 TDD---VYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNED  283 (291)
Q Consensus       230 v~d---i~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~~  283 (291)
                      |+|   ++++.+++    ++.|+.+. ++....  +.+.+||+|||||.|||+++.+
T Consensus        85 v~~~~~l~~~~~~l----~~~gv~~~-~~~~~~--~~~~~yf~DPdG~~iEl~~~~~  134 (144)
T d1zswa1          85 VPSEDSLHYWKERF----EKFDVKHS-EMTTYA--NRPALQFEDAEGLRLVLLVSNG  134 (144)
T ss_dssp             ESCHHHHHHHHHHH----HHTTCEEC-CSEEET--TEEEEEEECTTCCEEEEEECTT
T ss_pred             cCCchhHHHHhhhh----hccceeee-CccccC--CeEEEEEECCCCCEEEEEEeCC
Confidence            998   55566677    99999874 444443  3678999999999999998765

>d1zswa2 d.32.1.10 (A:145-314) Hypothetical protein BC1024 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: BC1024-like
domain: Hypothetical protein BC1024
species: Bacillus cereus [TaxId: 1396]

Probab=99.77  E-value=4.3e-18  Score=130.60  Aligned_cols=122  Identities=20%  Similarity=0.240  Sum_probs=84.4

Q ss_pred             CCccceeeEEEEeCCHHHHHHHHHHhcCCEEEEEeccCCCceeeEEeeccCCCcceEEEeeecCCCCcccCCCCceEEEE
Q 022831           19 KDKRRLLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHLAI   98 (291)
Q Consensus        19 ~~~~~i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~g~~~~~i~~   98 (291)
                      ..|++|+||+|.|+|++++.+||+++|||++..+...    + ..+.......... +.+.............+++||+|
T Consensus         8 ~~I~Gl~HV~L~V~Dle~s~~FY~~vLG~~~~~~~~~----~-~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~HiAf   81 (170)
T d1zswa2           8 HQIQGMGSVELTVRRLDKMASTLTEIFGYTEVSRNDQ----E-AIFQSIKGEAFGE-IVVKYLDGPTEKPGRGSIHHLAI   81 (170)
T ss_dssp             GSCCEEEEEEEEESCHHHHHHHHHHTTCCEEEEECSS----E-EEEESSTTCSTTC-EEEEECCSSBCBCCBTCEEEEEE
T ss_pred             HHhCCeeeEEEEeCCHHHHHHHHHHHhCCEEEeecCc----e-EEEEeccCccceE-EEeccccccccccCccccceEEE
Confidence            4689999999999999999999999999999876321    1 2333222222222 22222222222222236889999


Q ss_pred             EECC---HHHHHHHHHHcCCeeeeCCccCCCCceEEEEEECCCCcEEEEEecCC
Q 022831           99 ATED---VYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFELIQRGP  149 (291)
Q Consensus        99 ~v~d---~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dP~G~~iel~~~~~  149 (291)
                      .|+|   ++++++++.+.|+++. ++...  +....+||+|||||.|||+...+
T Consensus        82 ~V~~~~~l~~~~~~l~~~G~~~~-~~~~~--~~~~s~Yf~DPdG~~iEl~t~~p  132 (170)
T d1zswa2          82 RVKNDAELAYWEEQVKQRGFHSS-GIIDR--FYFKSLYFRESNGILFEIATDGP  132 (170)
T ss_dssp             EESSHHHHHHHHHHHHHTTCCCC-CCEEC--SSEEEEEEECTTCCEEEEEEEEE
T ss_pred             EeCChHHHHHHHHHHHhcCCCcc-ccccC--CCEEEEEEECCCCcEEEEEECCC
Confidence            9986   7788999999999874 33333  23445899999999999998653

>d1r9ca_ d.32.1.2 (A:) Fosfomycin resistance protein FosX {Mesorhizobium loti [TaxId: 381]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Fosfomycin resistance protein FosX
species: Mesorhizobium loti [TaxId: 381]

Probab=99.75  E-value=1.7e-17  Score=121.46  Aligned_cols=119  Identities=18%  Similarity=0.248  Sum_probs=83.5

Q ss_pred             CccceeeEEEEeCCHHHHHHHHHHhcCCEEEEEeccCCC-ceeeEEeeccCCCcceEEEeeecCCCCcccCCCCceEEEE
Q 022831           20 DKRRLLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEE-KYSNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHLAI   98 (291)
Q Consensus        20 ~~~~i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~g~~~~~i~~   98 (291)
                      |+.+|+|++|.|+|++++.+||+++|||++..+...... .....++..+    ...+.+......    ...+..|++|
T Consensus         1 Mi~~i~Hi~l~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~----~~~~~~~~~f   72 (130)
T d1r9ca_           1 MIEGLSHMTFIVRDLERMTRILEGVFDAREVYASDTEQFSLSREKFFLIG----DIWVAIMQGEKL----AERSYNHIAF   72 (130)
T ss_dssp             CEEEEEEEEEEESCHHHHHHHHHHHHCCEEEEEGGGSTTCCSCEEEEEET----TEEEEEEECCCC----SSCCSCEEEE
T ss_pred             CCCcEeEEEEEeCCHHHHHHHHHHhcCCEEEEEcCCccccceeEEEEecC----CEEEeecccccc----cccceeeeee
Confidence            688999999999999999999999999999876554332 2223334332    223333332211    2236678999


Q ss_pred             EEC--CHHHHHHHHHHcCCeeeeCCccCCCCceEEEEEECCCCcEEEEEec
Q 022831           99 ATE--DVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFELIQR  147 (291)
Q Consensus        99 ~v~--d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dP~G~~iel~~~  147 (291)
                      .|+  |+++++++|+++|+++..++....++.+ .+||+|||||+|||...
T Consensus        73 ~v~~~dv~~~~~~l~~~gv~i~~~~~~~~~~~~-~~~~~DPdGn~iEl~~~  122 (130)
T d1r9ca_          73 KIDDADFDRYAERVGKLGLDMRPPRPRVEGEGR-SIYFYDDDNHMFELHTG  122 (130)
T ss_dssp             ECCGGGHHHHHHHHHHHTCCBCCCCC-----CC-EEEEECTTSCEEEEECC
T ss_pred             cccHHHHHHHHHHHHHCCCeEecCCcccCCCEE-EEEEECCCCCEEEEEEC
Confidence            775  7999999999999998766544444444 48999999999999764

>d1f1ua2 d.32.1.3 (A:148-323) Homoprotocatechuate 2,3-dioxygenase {Arthrobacter globiformis [TaxId: 1665]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Homoprotocatechuate 2,3-dioxygenase
species: Arthrobacter globiformis [TaxId: 1665]

Probab=99.75  E-value=1.1e-17  Score=128.93  Aligned_cols=122  Identities=18%  Similarity=0.207  Sum_probs=91.0

Q ss_pred             CCceeeeeeeCCchhhHHHHHHhcCCeeeeeccCcccceeeeeeccCCCCcceEEEEeEecCceeeccCceeeEEEEEec
Q 022831          152 EPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAISTD  231 (291)
Q Consensus       152 ~~~~hv~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~~hia~~v~  231 (291)
                      .+|+||+|.|+|++++++|| ++|||+++++...+++.....++..+.  .+..+.+...       ..++.+|++|.+.
T Consensus         4 ~rl~Hv~l~v~Dle~s~~FY-e~LGf~~~d~~~~~~~~~~~~~~~~~~--~~~~l~~~~~-------~~~~~~H~~f~~~   73 (176)
T d1f1ua2           4 VRLDHFNQVTPDVPRGRAYL-EDLGFRVSEDIKDSDGVTYAAWMHRKQ--TVHDTALTGG-------NGPRMHHVAFATH   73 (176)
T ss_dssp             CEEEEEEEEESCHHHHHHHH-HHTTCEEEEEEECTTCCEEEEEEESSS--SSCSEEEEES-------SBSEEEEEEEECS
T ss_pred             eEeeeEEEEcCCHHHHHHHH-HHCCCEEEEEEecCCcceeeeeeccCc--cccceecccc-------cCCCccceeEEec
Confidence            56999999999999999999 789999988776665555566666433  2344444331       2468899999999


Q ss_pred             ChHHHHHHHHHHHHhhCCe--eeecccccCCCCceEEEEECCCCCeEEEEechhh
Q 022831          232 DVYKSAEVVNLVTQELGGK--ITRQPGPIPGLNTKITSFVDPDGWKTVLVDNEDF  284 (291)
Q Consensus       232 di~~~~~~l~~~~~~~G~~--~~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~~~  284 (291)
                      +++++.+..+. +.++|+.  +...|+++..++..++||+|||||+|||+.....
T Consensus        74 ~~~~v~~~~~~-l~~~g~~~~~~~~p~~h~~g~~~~~Y~~DPdG~~iEl~~~~~~  127 (176)
T d1f1ua2          74 EKHNIIQICDK-MGALRISDRIERGPGRHGVSNAFYLYILDPDGHRIEIYTQDYY  127 (176)
T ss_dssp             SHHHHHHHHHH-HHHTTCGGGEEEEEEECSTTCCEEEEEECTTCCEEEEEECCCC
T ss_pred             cchhHHHHHHH-HHHcCCceeeeecccccCCCCceEEEEECCCCCEEEEEeCCcc
Confidence            87766654422 2788884  5577888777667889999999999999986543

>d1twua_ d.32.1.8 (A:) Hypothetical protein YycE {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Hypothetical protein YycE
domain: Hypothetical protein YycE
species: Bacillus subtilis [TaxId: 1423]

Probab=99.75  E-value=2.6e-18  Score=127.20  Aligned_cols=123  Identities=18%  Similarity=0.333  Sum_probs=88.2

Q ss_pred             Cceeeeeee----CCchhhHHHHHHhcCCeeeeeccCcccceeeeeeccCCCCcceEEEEeEecCceeeccCceeeEEEE
Q 022831          153 PLCQVMLRV----GDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAI  228 (291)
Q Consensus       153 ~~~hv~l~v----~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~~hia~  228 (291)
                      .+.|+.++|    +|++++.+||+++|||++..+...+. .+...++..+.  ....+.+....+......+.+.+|++|
T Consensus         5 ~~~~~~~RVa~pv~Dle~s~~FY~~vLG~~~~~~~~~~~-~~~~~~~~~~~--~~~~l~~~~~~~~~~~~~~~~~~hlaf   81 (137)
T d1twua_           5 SFQAAQIRIARPTGQLDEIIRFYEEGLCLKRIGEFSQHN-GYDGVMFGLPH--ADYHLEFTQYEGGSTAPVPHPDSLLVF   81 (137)
T ss_dssp             SCBCSCEEEEEECSCHHHHHHHHTTTSCCCEEEEEEEET-TEEEEEEESSS--SSEEEEEEEETTCCCCCCCCTTCEEEE
T ss_pred             CCceEEEEEecccCCHHHHHHHHHhccCCceeeeecccc-ceeEEEecCCC--CceeeecccccccccccccccCceEEE
Confidence            455666554    79999999999999999877654333 35566666443  345566666555443334456789999


Q ss_pred             EecC---hHHHHHHHHHHHHhhCCeeeecccccCCCCceEEEEECCCCCeEEEEechhh
Q 022831          229 STDD---VYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNEDF  284 (291)
Q Consensus       229 ~v~d---i~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~~~  284 (291)
                      .|+|   +++++++|    +++|+++..++...  .+.+.+||+||||++|||+..+..
T Consensus        82 ~v~~~~dv~~~~~~l----~~~G~~~~~~~~~~--~~~~~~~f~DPDG~~Iel~~~~~~  134 (137)
T d1twua_          82 YVPNAVELAAITSKL----KHMGYQEVESENPY--WSNGGVTIEDPDGWRIVFMNSKGI  134 (137)
T ss_dssp             ECCCHHHHHHHHHHH----HHTTCCEECCSSHH--HHSSEEEEECTTCCEEEEESSCCC
T ss_pred             EeCCHHHHHHHHHHH----HHCCCeEeCCCCCC--CCceEEEEECCCCCEEEEEcCCCC
Confidence            9877   56666677    99999998765432  346789999999999999987644

>d1qipa_ d.32.1.1 (A:) Glyoxalase I (lactoylglutathione lyase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Glyoxalase I (lactoylglutathione lyase)
domain: Glyoxalase I (lactoylglutathione lyase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.75  E-value=3.3e-17  Score=126.40  Aligned_cols=130  Identities=28%  Similarity=0.509  Sum_probs=93.5

Q ss_pred             CCccceeeEEEEeCCHHHHHHHHHHhcCCEEEEEeccCCCceeeEEeeccCCC-----------------cceEEEeeec
Q 022831           19 KDKRRLLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQ-----------------SYFVVELTYN   81 (291)
Q Consensus        19 ~~~~~i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~-----------------~~~~l~l~~~   81 (291)
                      +...+++|+.|.|+|++++++||+++|||++......+...+...+...+...                 ....+.....
T Consensus        19 ~~~~~l~Hi~l~V~Dl~~si~FY~~vLG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   98 (176)
T d1qipa_          19 TKDFLLQQTMLRVKDPKKSLDFYTRVLGMTLIQKCDFPIMKFSLYFLAYEDKNDIPKEKDEKIAWALSRKATLELTHNWG   98 (176)
T ss_dssp             GTTCEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEETTTTEEEEEEESCCGGGSCSSHHHHHHHHTTSSSEEEEEEETT
T ss_pred             ccceEEeEEEEEeCCHHHHHHHHHHhhCCeEeeeecccCCceEEEEeecCCccccccccccccccccccccceeEEEeec
Confidence            34567999999999999999999999999998877766666666665432211                 0111111111


Q ss_pred             C---CCCc----ccCCCCceEEEEEECCHHHHHHHHHHcCCeeeeCCccCCCCceEEEEEECCCCcEEEEEecCCC
Q 022831           82 Y---GVTS----YDIGTGFGHLAIATEDVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFELIQRGPT  150 (291)
Q Consensus        82 ~---~~~~----~~~g~~~~~i~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dP~G~~iel~~~~~~  150 (291)
                      .   ....    .....++.|+|+.++|+++++++|++.|+++..+|...... . ++|++||||+.|||+|...-
T Consensus        99 ~~~~~~~~~~~~~~~~~g~~h~~~~~~d~~~~~~~l~~~Gv~~~~~p~~g~~~-~-~~f~~DPdG~~IElvq~~~~  172 (176)
T d1qipa_          99 TEDDETQSYHNGNSDPRGFGHIGIAVPDVYSACKRFEELGVKFVKKPDDGKMK-G-LAFIQDPDGYWIEILNPNKM  172 (176)
T ss_dssp             GGGCTTCCCBCSSSSSCBEEEEEEECSCHHHHHHHHHHTTCEEEECTTSSSST-T-CEEEECTTCCEEEEECTTTG
T ss_pred             cccccCcCccCCCCCccceeEEEeeHHHHHHHHHHHHHCCCEEeeCCccCCce-E-EEEEECCCCCEEEEEeCCCC
Confidence            0   1111    11234888999999999999999999999999887654433 2 37899999999999997643

>d2c21a1 d.32.1.1 (A:3-141) Glyoxalase I (lactoylglutathione lyase) {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Glyoxalase I (lactoylglutathione lyase)
domain: Glyoxalase I (lactoylglutathione lyase)
species: Leishmania major [TaxId: 5664]

Probab=99.75  E-value=2.1e-17  Score=121.82  Aligned_cols=127  Identities=40%  Similarity=0.668  Sum_probs=91.0

Q ss_pred             CCceeeeeeeCCchhhHHHHHHhcCCeeeeeccCcccceeeeeeccCCCCcceEEEEeEecCceeeccCceeeEEEEEec
Q 022831          152 EPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAISTD  231 (291)
Q Consensus       152 ~~~~hv~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~~hia~~v~  231 (291)
                      .++.|+.|.|+|++++.+||+++|||++.............................................++++.++
T Consensus         2 ~r~~Hv~l~V~Dl~~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (139)
T d2c21a1           2 RRMLHTMIRVGDLDRSIKFYTERLGMKVLRKWDVPEDKYTLVFLGYGPEMSSTVLELTYNYGVTSYKHDEAYGHIAIGVE   81 (139)
T ss_dssp             CEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEEGGGTEEEEEEESSCTTTSCEEEEEEETTCCCCCCCSSEEEEEEEES
T ss_pred             CceEEEEEEeCCHHHHHHHHHHHhCCEeeccccccccceeeeeecccccccccccccccccCcccccCCCccceeeeehh
Confidence            57899999999999999999999999998876554443444443332222222222222222222233457788999999


Q ss_pred             ChHHHHHHHHHHHHhhCCeeeecccccCCCCceEEEEECCCCCeEEEEechhhhhh
Q 022831          232 DVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNEDFLKE  287 (291)
Q Consensus       232 di~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~~~~~~  287 (291)
                      ++.+.++.+    ...++++...+.     +.+++||+|||||+|||++..+...+
T Consensus        82 ~~~~~~~~~----~~~~~~~~~~~~-----g~~~~~~~DPdGn~iEl~~~~~~~~~  128 (139)
T d2c21a1          82 DVKELVADM----RKHDVPIDYEDE-----SGFMAFVVDPDGYYIELLNEKTMMEK  128 (139)
T ss_dssp             CHHHHHHHH----HHTTCCEEEECS-----SSSEEEEECTTSCEEEEEEHHHHHHH
T ss_pred             hHHHHHHHH----HHcCCceeeCCC-----CcEEEEEECCCCCEEEEEECCCCCCc
Confidence            999999999    899988776543     46889999999999999998876654

>d1lgta1 d.32.1.3 (A:2-132) 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme) {Burkholderia cepacia, formerly Pseudomonas cepacia [TaxId: 292]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme)
species: Burkholderia cepacia, formerly Pseudomonas cepacia [TaxId: 292]

Probab=99.75  E-value=9.1e-18  Score=123.20  Aligned_cols=114  Identities=16%  Similarity=0.171  Sum_probs=85.9

Q ss_pred             CccceeeEEEEeCCHHHHHHHHHHhcCCEEEEEeccCCCceeeEEeeccCCCcceEEEeeecCCCCcccCCCCceEEEEE
Q 022831           20 DKRRLLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHLAIA   99 (291)
Q Consensus        20 ~~~~i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~g~~~~~i~~~   99 (291)
                      .|++|+||+|.|+|++++++||+++|||++..+...      ..+++.+.....  +.+...       ..+++.|++|.
T Consensus         1 ~I~~l~hv~i~V~Dl~~s~~FY~~vLG~~~~~~~~~------~~~l~~~~~~~~--l~l~~~-------~~~~~~h~~f~   65 (131)
T d1lgta1           1 SIRSLGYMGFAVSDVAAWRSFLTQKLGLMEAGTTDN------GDLFRIDSRAWR--IAVQQG-------EVDDLAFAGYE   65 (131)
T ss_dssp             CEEEEEEEEEEESCHHHHHHHHHHTTCCEEEEEETT------EEEEESSSBSCS--EEEEEC-------TTCEEEEEEEE
T ss_pred             CcccccEEEEEeCCHHHHHHHHHHhhCCceeecCCc------ceEEeecCCceE--EEEecC-------CCCCceEEEEE
Confidence            378999999999999999999999999999876432      566776543333  333322       12378899999


Q ss_pred             ECC---HHHHHHHHHHcCCeeeeCCccCC--CCceEEEEEECCCCcEEEEEecC
Q 022831          100 TED---VYKMVENIRAKGGNVTREPGPLK--GMTTHFAFVKDPDGYIFELIQRG  148 (291)
Q Consensus       100 v~d---~~~~~~~l~~~G~~~~~~~~~~~--~g~~~~~~~~dP~G~~iel~~~~  148 (291)
                      |.+   ++++.++|+++|+++...+....  .+...++||+||+||.||++...
T Consensus        66 v~~~~dl~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~f~DPdGn~iE~~~~~  119 (131)
T d1lgta1          66 VADAAGLAQMADKLKQAGIAVTTGDASLARRRGVTGLITFADPFGLPLEIYYGA  119 (131)
T ss_dssp             ESSHHHHHHHHHHHHHTTCCCEECCHHHHHHHTCSEEEEEECTTSCEEEEEECC
T ss_pred             EccHHHHHHHHHHHHHcCCceEECCccccccCCceEEEEEECCCCCEEEEEeCC
Confidence            964   67889999999999887665432  12234588999999999998754

>d1sqia1 d.32.1.3 (A:8-156) 4-hydroxyphenylpyruvate dioxygenase, HppD {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.74  E-value=7.1e-18  Score=126.65  Aligned_cols=130  Identities=17%  Similarity=0.233  Sum_probs=95.7

Q ss_pred             CCccceeeEEEEeCCHHHHHHHHHHhcCCEEEEEeccCCCceeeEEeeccCCCcceEEEeeecCC--CCc-----ccCCC
Q 022831           19 KDKRRLLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYG--VTS-----YDIGT   91 (291)
Q Consensus        19 ~~~~~i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~--~~~-----~~~g~   91 (291)
                      ..+.+|+||+|.|+|++++.+||+++|||++......+.+.....++.+.....  .+++.....  ...     ...+.
T Consensus         7 ~~~~~~dHi~i~V~Dl~~a~~fY~~~lGf~~~~~~~~~~~~~~~~~~~~~~~~~--~~~l~~~~~~~~~~~~~~~~~~g~   84 (149)
T d1sqia1           7 GRFLHFHSVTFWVGNAKQAASFYCNKMGFEPLAYKGLETGSREVVSHVIKQGKI--VFVLCSALNPWNKEMGDHLVKHGD   84 (149)
T ss_dssp             CEEEEEEEEEEECSCHHHHHHHHHHHHCCEEEEEESGGGTCCSEEEEEEEETTE--EEEEEEESSTTCHHHHHHHHHHCS
T ss_pred             CceeeEeEEEEEcCCHHHHHHHHhhccceEEEEEecccCCceEEEEEEecCCcE--EEEEEeccCCCCchhhhhhhhCCC
Confidence            457899999999999999999999999999988765544433333333332233  333333221  111     12467


Q ss_pred             CceEEEEEECCHHHHHHHHHHcCCeeeeCCccCCC--CceEEEEEECCCCcEEEEEecCCC
Q 022831           92 GFGHLAIATEDVYKMVENIRAKGGNVTREPGPLKG--MTTHFAFVKDPDGYIFELIQRGPT  150 (291)
Q Consensus        92 ~~~~i~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~--g~~~~~~~~dP~G~~iel~~~~~~  150 (291)
                      |+.||||.|+|+++++++|+++|+++..+|....+  |...++++++|+|..++|++....
T Consensus        85 G~~hiaf~V~di~~~~~~l~~~G~~~~~~P~~~~d~~G~v~~a~i~~~g~~~~~lier~~~  145 (149)
T d1sqia1          85 GVKDIAFEVEDCEHIVQKARERGAKIVREPWVEEDKFGKVKFAVLQTYGDTTHTLVEKINY  145 (149)
T ss_dssp             EEEEEEEEEECHHHHHHHHHHHTCCEEEEEEEEEETTEEEEEEEEECSTTCEEEEEEEESC
T ss_pred             eEEEEEEEeccHHHHHHHHHHCCCEEccCCeEEECCCCeEEEEEEECCCCCEEEEEEeCCC
Confidence            99999999999999999999999998888866543  333467789999999999997654

>d1f1ua1 d.32.1.3 (A:2-147) Homoprotocatechuate 2,3-dioxygenase {Arthrobacter globiformis [TaxId: 1665]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Homoprotocatechuate 2,3-dioxygenase
species: Arthrobacter globiformis [TaxId: 1665]

Probab=99.74  E-value=1.9e-17  Score=123.88  Aligned_cols=117  Identities=16%  Similarity=0.174  Sum_probs=87.4

Q ss_pred             CCccceeeEEEEeCCHHHHHHHHHHhcCCEEEEEeccCCCceeeEEeeccCCCcceEEEeeecCCCCcccCCCCceEEEE
Q 022831           19 KDKRRLLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHLAI   98 (291)
Q Consensus        19 ~~~~~i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~g~~~~~i~~   98 (291)
                      ..|++|+||.|.|+|++++++||+++|||++..+...      ..++........+.+.+...       ...++.|++|
T Consensus        12 ~~i~rl~hv~l~v~Dl~~s~~FY~~~lG~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~-------~~~~~~h~~~   78 (146)
T d1f1ua1          12 PDIVRCAYMEIVVTDLAKSREFYVDVLGLHVTEEDEN------TIYLRSLEEFIHHNLVLRQG-------PIAAVAAFAY   78 (146)
T ss_dssp             CCEEEEEEEEEEESCHHHHHHHHTTTTCCEEEEECSS------EEEEECTTCCSSCSEEEEEC-------SSCEEEEEEE
T ss_pred             CCCcEEeEEEEEeCCHHHHHHHHHhccCcEEEeecCC------ceeeecccccccceeecccc-------CCCCCceeeE
Confidence            4589999999999999999999999999999875321      33333222222222222222       1237889999


Q ss_pred             EEC---CHHHHHHHHHHcCCeeeeCCccCCCCceEEEEEECCCCcEEEEEecC
Q 022831           99 ATE---DVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFELIQRG  148 (291)
Q Consensus        99 ~v~---d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dP~G~~iel~~~~  148 (291)
                      .+.   |+++++++|+++|+++...+.....|...++||+||+|+.|||+...
T Consensus        79 ~~~~~~dl~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~DPdG~~iEl~~~~  131 (146)
T d1f1ua1          79 RVKSPAEVDAAEAYYKELGCRTERRKEGFTKGIGDSVRVEDPLGFPYEFFYET  131 (146)
T ss_dssp             EESSHHHHHHHHHHHHHTTCCEEEETTCSSTTBCSEEEEECTTSCEEEEECCB
T ss_pred             eeccchhHHHHHHHHHHcCCceeeccccccCCceEEEEEECCCCcEEEEEEec
Confidence            996   58899999999999988777776665545689999999999998764

>d1jc4a_ d.32.1.4 (A:) Methylmalonyl-CoA epimerase {Propionibacterium shermanii [TaxId: 1752]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Methylmalonyl-CoA epimerase
domain: Methylmalonyl-CoA epimerase
species: Propionibacterium shermanii [TaxId: 1752]

Probab=99.74  E-value=9.9e-18  Score=124.96  Aligned_cols=127  Identities=14%  Similarity=0.157  Sum_probs=89.4

Q ss_pred             CCceeeeeeeCCchhhHHHHHHhcCCeeeeeccCcccceeeeeec--cCCCCcceEEEEeEecCcee--------eccCc
Q 022831          152 EPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLG--YAEEDQTTVLELAYSYGVTE--------YTKGN  221 (291)
Q Consensus       152 ~~~~hv~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~l~~~~~~~~--------~~~~~  221 (291)
                      .+|+||.|.|+|++++.+||+++||+.+......+..+.......  .........+++........        .....
T Consensus         6 ~~i~Hi~i~v~Dl~~a~~fY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~~~~~~~~~~~~~~~~~~~~   85 (145)
T d1jc4a_           6 ICIDHVAYACPDADEASKYYQETFGWHELHREENPEQGVVEIMMAPAAKLTEHMTQVQVMAPLNDESTVAKWLAKHNGRA   85 (145)
T ss_dssp             SEEEEEEEECSCHHHHHHHHHHHHCCEEEEEEEETTTTEEEEEEESSSSCCTTCCEEEEEEESSTTSHHHHHHHHTTTCC
T ss_pred             eEEeEEEEEeCCHHHHHHHHHhhccCceeeeeeecccceEEEeeeceeccccccchhhhhhhhcccCcccccccccCCCC
Confidence            468999999999999999999999999877654333222222211  11122346677766433221        12346


Q ss_pred             eeeEEEEEecChHHHHHHHHHHHHhhCCeeeecccccCCCCceEEEE--ECCCCCeEEEEech
Q 022831          222 AYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSF--VDPDGWKTVLVDNE  282 (291)
Q Consensus       222 g~~hia~~v~di~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~--~DPdG~~iel~~~~  282 (291)
                      |++|+||.|+|+++++++|    +++|+++..++......+.+++|+  +||+|++|||+|.+
T Consensus        86 g~~Hia~~v~di~~~~~~l----~~~Gv~~~~~~~~~~~~g~~~~f~~p~dp~G~~iEl~e~p  144 (145)
T d1jc4a_          86 GLHHMAWRVDDIDAVSATL----RERGVQLLYDEPKLGTGGNRINFMHPKSGKGVLIELTQYP  144 (145)
T ss_dssp             EEEEEEEECSCHHHHHHHH----HHHTCCBSCSSCEECSSSCEEEEBCGGGGTTSCEEEEECC
T ss_pred             cceEEEEecchHHHHHHHH----HHCCCEEeCCCceECCCCCEEEEEeccCCCCeEEEEEECC
Confidence            8999999999999999999    999999876543332234455555  79999999999964

>d1qipa_ d.32.1.1 (A:) Glyoxalase I (lactoylglutathione lyase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Glyoxalase I (lactoylglutathione lyase)
domain: Glyoxalase I (lactoylglutathione lyase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.74  E-value=2.3e-17  Score=127.34  Aligned_cols=129  Identities=29%  Similarity=0.519  Sum_probs=91.4

Q ss_pred             CCceeeeeeeCCchhhHHHHHHhcCCeeeeeccCcccceeeeeeccCCCCc---------------ceEEEEeEecCce-
Q 022831          152 EPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQ---------------TTVLELAYSYGVT-  215 (291)
Q Consensus       152 ~~~~hv~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~l~l~~~~~~~-  215 (291)
                      -+++|+.|+|+|+++|.+||+++|||++......+.......+...+....               .....+....... 
T Consensus        22 ~~l~Hi~l~V~Dl~~si~FY~~vLG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  101 (176)
T d1qipa_          22 FLLQQTMLRVKDPKKSLDFYTRVLGMTLIQKCDFPIMKFSLYFLAYEDKNDIPKEKDEKIAWALSRKATLELTHNWGTED  101 (176)
T ss_dssp             CEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEETTTTEEEEEEESCCGGGSCSSHHHHHHHHTTSSSEEEEEEETTGGG
T ss_pred             eEEeEEEEEeCCHHHHHHHHHHhhCCeEeeeecccCCceEEEEeecCCccccccccccccccccccccceeEEEeecccc
Confidence            348999999999999999999999999876655444444444443221110               0111111111110 


Q ss_pred             ----e----eccCceeeEEEEEecChHHHHHHHHHHHHhhCCeeeecccccCCCCceEEEEECCCCCeEEEEechhhhh
Q 022831          216 ----E----YTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNEDFLK  286 (291)
Q Consensus       216 ----~----~~~~~g~~hia~~v~di~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~~~~~  286 (291)
                          .    .....|+.|+++.++|++++.+++    +++|+++..+|...++  .+++||+|||||.|||+|+..+..
T Consensus       102 ~~~~~~~~~~~~~~g~~h~~~~~~d~~~~~~~l----~~~Gv~~~~~p~~g~~--~~~~f~~DPdG~~IElvq~~~~~~  174 (176)
T d1qipa_         102 DETQSYHNGNSDPRGFGHIGIAVPDVYSACKRF----EELGVKFVKKPDDGKM--KGLAFIQDPDGYWIEILNPNKMAT  174 (176)
T ss_dssp             CTTCCCBCSSSSSCBEEEEEEECSCHHHHHHHH----HHTTCEEEECTTSSSS--TTCEEEECTTCCEEEEECTTTGGG
T ss_pred             ccCcCccCCCCCccceeEEEeeHHHHHHHHHHH----HHCCCEEeeCCccCCc--eEEEEEECCCCCEEEEEeCCCCCc
Confidence                0    112348899999999999999999    9999999998875443  567889999999999999887653

>d1sqda1 d.32.1.3 (A:14-180) 4-hydroxyphenylpyruvate dioxygenase, HppD {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.74  E-value=1.7e-17  Score=127.04  Aligned_cols=131  Identities=20%  Similarity=0.213  Sum_probs=97.3

Q ss_pred             cCCccceeeEEEEeCCHHHHHHHHHHhcCCEEEEEeccCCCceeeEEeeccCCCcceEEEeeecCC------------CC
Q 022831           18 KKDKRRLLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYG------------VT   85 (291)
Q Consensus        18 ~~~~~~i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~------------~~   85 (291)
                      .+.+.+++||.|.|+|++++.+||+++|||++..+...+.+......+.++.....+.+.......            ..
T Consensus         7 ~~~i~~~dHv~i~V~Dle~a~~fY~~~LGf~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~   86 (167)
T d1sqda1           7 KFKVKRFHHIEFWCGDATNVARRFSWGLGMRFSAKSDLSTGNMVHASYLLTSGDLRFLFTAPYSPSLSAGEIKPTTTASI   86 (167)
T ss_dssp             SSCEEEEEEEEEECSCHHHHHHHHHHHHTCEEEEEESGGGTCSSEEEEEEEETTEEEEEEEECCGGGTTTCCGGGCCCSS
T ss_pred             CCCCceEeEEEEEeCCHHHHHHHHHHHhCCeEEEEeeccCCCeeEEEEEeeCCCeeEEEecccccccccccccccccccc
Confidence            367899999999999999999999999999998876555443333333333333333332211100            00


Q ss_pred             c-----------ccCCCCceEEEEEECCHHHHHHHHHHcCCeeeeCCccCCCCceEEEEEECCCCcEEEEEecCC
Q 022831           86 S-----------YDIGTGFGHLAIATEDVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFELIQRGP  149 (291)
Q Consensus        86 ~-----------~~~g~~~~~i~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dP~G~~iel~~~~~  149 (291)
                      +           ...+.|+.||||.|+|+++++++|.++|+++..+|....++.+ +++++++++..++|++++.
T Consensus        87 ~~~~~~~~~~~~~~~~~G~~Hiaf~VdDi~aa~~~l~~~G~~~~~~P~~~~~~~~-~a~I~~~gd~~~~~v~r~~  160 (167)
T d1sqda1          87 PSFDHGSCRSFFSSHGLGVRAVAIEVEDAESAFSISVANGAIPSSPPIVLNEAVT-IAEVKLYGDVVLRYVSYKA  160 (167)
T ss_dssp             TTCCHHHHHHHHHHHCSEEEEEEEEESCHHHHHHHHHHTTCCEEEEEEEETTTEE-EEEEEEETTEEEEEEEECC
T ss_pred             ccCCcchHHHhhhccCCCceEEEEEeCCHHHHHHHHHHCCCEEecCCeecCCCEE-EEEEEccCCcEEEEEecCC
Confidence            0           0135689999999999999999999999999999988877644 5889999999999999864

>d1zswa2 d.32.1.10 (A:145-314) Hypothetical protein BC1024 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: BC1024-like
domain: Hypothetical protein BC1024
species: Bacillus cereus [TaxId: 1396]

Probab=99.73  E-value=2.3e-17  Score=126.44  Aligned_cols=119  Identities=17%  Similarity=0.080  Sum_probs=80.7

Q ss_pred             CCceeeeeeeCCchhhHHHHHHhcCCeeeeeccCcccceeeeeeccCCCCcceEEEEeEecCceeeccCceeeEEEEEec
Q 022831          152 EPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAISTD  231 (291)
Q Consensus       152 ~~~~hv~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~~hia~~v~  231 (291)
                      ..++||+|.|+|++++++||+++|||++..+.+.    ...+....+..  ...+.+.........+...+++|++|.|+
T Consensus        11 ~Gl~HV~L~V~Dle~s~~FY~~vLG~~~~~~~~~----~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~l~HiAf~V~   84 (170)
T d1zswa2          11 QGMGSVELTVRRLDKMASTLTEIFGYTEVSRNDQ----EAIFQSIKGEA--FGEIVVKYLDGPTEKPGRGSIHHLAIRVK   84 (170)
T ss_dssp             CEEEEEEEEESCHHHHHHHHHHTTCCEEEEECSS----EEEEESSTTCS--TTCEEEEECCSSBCBCCBTCEEEEEEEES
T ss_pred             CCeeeEEEEeCCHHHHHHHHHHHhCCEEEeecCc----eEEEEeccCcc--ceEEEeccccccccccCccccceEEEEeC
Confidence            4589999999999999999999999998876432    22233332221  22233322222222233457899999998


Q ss_pred             C---hHHHHHHHHHHHHhhCCeeeecccccCCCCceEEEEECCCCCeEEEEechh
Q 022831          232 D---VYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNED  283 (291)
Q Consensus       232 d---i~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~~  283 (291)
                      |   ++++.+++    ++.|+++. ++..+.  ..+.+||+|||||+|||+..++
T Consensus        85 ~~~~l~~~~~~l----~~~G~~~~-~~~~~~--~~~s~Yf~DPdG~~iEl~t~~p  132 (170)
T d1zswa2          85 NDAELAYWEEQV----KQRGFHSS-GIIDRF--YFKSLYFRESNGILFEIATDGP  132 (170)
T ss_dssp             SHHHHHHHHHHH----HHTTCCCC-CCEECS--SEEEEEEECTTCCEEEEEEEEE
T ss_pred             ChHHHHHHHHHH----HhcCCCcc-ccccCC--CEEEEEEECCCCcEEEEEECCC
Confidence            7   55555555    99999874 344333  3678999999999999998643

>d1npba_ d.32.1.2 (A:) Fosfomycin resistance protein A (FosA) {Serratia marcescens [TaxId: 615]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Fosfomycin resistance protein A (FosA)
species: Serratia marcescens [TaxId: 615]

Probab=99.73  E-value=5.7e-17  Score=120.25  Aligned_cols=116  Identities=19%  Similarity=0.320  Sum_probs=83.7

Q ss_pred             CccceeeEEEEeCCHHHHHHHHHHhcCCEEEEEeccCCCceeeEEeeccCCCcceEEEeeecCCCCcccCCCCceEEEEE
Q 022831           20 DKRRLLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHLAIA   99 (291)
Q Consensus        20 ~~~~i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~g~~~~~i~~~   99 (291)
                      |+++|+||+|.|+|++++++||+++|||++......      ..++..+  +....+.+....... .....+..|++|.
T Consensus         1 Mi~~l~Hi~l~v~d~~~~~~FY~~vLG~~~~~~~~~------~~~~~~~--~~~~~l~~~~~~~~~-~~~~~~~~h~~~~   71 (140)
T d1npba_           1 MLQSLNHLTLAVSDLQKSVTFWHELLGLTLHARWNT------GAYLTCG--DLWVCLSYDEARQYV-PPQESDYTHYAFT   71 (140)
T ss_dssp             CCCEEEEEEEEESCHHHHHHHHHTTSCCEEEEEETT------EEEEEET--TEEEEEEECTTCCCC-CGGGSCSCEEEEE
T ss_pred             CCCcEeEEEEEeCCHHHHHHHHHHHhCCEEEEEecc------ccccccc--cccceeecccccccC-CCcCCccceeeee
Confidence            789999999999999999999999999999875432      3444443  233334333222221 2223366788888


Q ss_pred             E--CCHHHHHHHHHHcCCeeeeCCccCCCCceEEEEEECCCCcEEEEEecC
Q 022831          100 T--EDVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFELIQRG  148 (291)
Q Consensus       100 v--~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dP~G~~iel~~~~  148 (291)
                      +  +|+++++++|+++|+++...+.   ++.+ .+||+|||||.|||....
T Consensus        72 ~~~~d~~~~~~~l~~~Gv~~~~~~~---~~~~-~~~~~DPdGn~iEi~~~~  118 (140)
T d1npba_          72 VAEEDFEPLSQRLEQAGVTIWKQNK---SEGA-SFYFLDPDGHKLELHVGS  118 (140)
T ss_dssp             CCHHHHHHHHHHHHHTTCCEEECCC---SSSE-EEEEECTTCCEEEEEECC
T ss_pred             chHHHHHHHHHHHHHCCCeEeecCC---CCce-EEEEECCCCCEEEEEECC
Confidence            8  6799999999999999876542   2333 478999999999997643

>d1t47a1 d.32.1.3 (A:16-178) 4-hydroxyphenylpyruvate dioxygenase, HppD {Streptomyces avermitilis [TaxId: 33903]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Streptomyces avermitilis [TaxId: 33903]

Probab=99.73  E-value=1.9e-17  Score=126.14  Aligned_cols=129  Identities=21%  Similarity=0.204  Sum_probs=95.8

Q ss_pred             CCccceeeEEEEeCCHHHHHHHHHHhcCCEEEEEeccCCCceeeEEeeccCCCcceEEEeeecCCCCc----------cc
Q 022831           19 KDKRRLLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTS----------YD   88 (291)
Q Consensus        19 ~~~~~i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~----------~~   88 (291)
                      ..+.+|+||.|.|+|++++++||+++|||+++.....+..........+...  ...+++........          ..
T Consensus         3 ~~i~~idHv~i~V~D~~~a~~fY~~~lGf~~v~~~~~~~~~~~~~~~~l~~~--~~~i~l~~~~~~~~~~~~~~~~~~~~   80 (163)
T d1t47a1           3 FPVKGMDAVVFAVGNAKQAAHYYSTAFGMQLVAYSGPENGSRETASYVLTNG--SARFVLTSVIKPATPWGHFLADHVAE   80 (163)
T ss_dssp             SCCCEEEEEEEECSCHHHHHHHHHHTSCCEEEEEESGGGTCCSEEEEEEEET--TEEEEEEEESSCCSHHHHHHHHHHHH
T ss_pred             CCCceEeEEEEEeCCHHHHHHHHHHHhCCeEEeeecccccceeEEEEEEecC--CEEEEEeccCCCCCccccccchhhhc
Confidence            5789999999999999999999999999999876654443322333322222  33455554332211          12


Q ss_pred             CCCCceEEEEEECCHHHHHHHHHHcCCeeeeCCccCCC--CceEEEEEECCCCcEEEEEecCC
Q 022831           89 IGTGFGHLAIATEDVYKMVENIRAKGGNVTREPGPLKG--MTTHFAFVKDPDGYIFELIQRGP  149 (291)
Q Consensus        89 ~g~~~~~i~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~--g~~~~~~~~dP~G~~iel~~~~~  149 (291)
                      .+.|+.||||.|+|+++++++|+++|+++..+|....+  |...++++++|+|..++|++...
T Consensus        81 ~g~G~~hiaf~VdDid~a~~~l~~~Ga~~~~~P~~~~d~~G~v~~a~I~~~g~~~~~lier~~  143 (163)
T d1t47a1          81 HGDGVVDLAIEVPDARAAHAYAIEHGARSVAEPYELKDEHGTVVLAAIATYGKTRHTLVDRTG  143 (163)
T ss_dssp             HCSEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEEEETTEEEEEEEEECSTTCEEEEEEEEE
T ss_pred             CCCceEEEEEeeCCHHHHHHHHHHCCCeEEecCcceeCCCCEEEEEEEecCCCceEEEEeccC
Confidence            46799999999999999999999999999888776543  33456889999999999998753

>d1kw3b1 d.32.1.3 (B:1-132) 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme) {Pseudomonas sp. [TaxId: 306]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme)
species: Pseudomonas sp. [TaxId: 306]

Probab=99.73  E-value=2e-17  Score=121.47  Aligned_cols=114  Identities=15%  Similarity=0.139  Sum_probs=85.8

Q ss_pred             CccceeeEEEEeCCHHHHHHHHHHhcCCEEEEEeccCCCceeeEEeeccCCCcceEEEeeecCCCCcccCCCCceEEEEE
Q 022831           20 DKRRLLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHLAIA   99 (291)
Q Consensus        20 ~~~~i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~g~~~~~i~~~   99 (291)
                      .|.+|+||+|.|+|++++++||+++|||++..+...      .+++.++.....+.  +...       ...+..|++|.
T Consensus         1 ~i~~L~hv~i~v~Dl~~s~~FY~~vLG~~~~~~~~~------~~~l~~~~~~~~l~--~~~~-------~~~~~~h~~f~   65 (132)
T d1kw3b1           1 SIERLGYLGFAVKDVPAWDHFLTKSVGLMAAGSAGD------AALYRADQRAWRIA--VQPG-------ELDDLAYAGLE   65 (132)
T ss_dssp             CCCEEEEEEEEESCHHHHHHHHHHTTCCEEEEEETT------EEEEESSSBSCSEE--EEEC-------TTCEEEEEEEE
T ss_pred             CcccccEEEEEeCCHHHHHHHHHHHhCCceeccccc------eeeeeeeecceeee--eecc-------CCCCceEEEEE
Confidence            378999999999999999999999999999876432      56777654333333  3222       12378899999


Q ss_pred             EC---CHHHHHHHHHHcCCeeeeCCccCCC--CceEEEEEECCCCcEEEEEecC
Q 022831          100 TE---DVYKMVENIRAKGGNVTREPGPLKG--MTTHFAFVKDPDGYIFELIQRG  148 (291)
Q Consensus       100 v~---d~~~~~~~l~~~G~~~~~~~~~~~~--g~~~~~~~~dP~G~~iel~~~~  148 (291)
                      |.   |++++.++|.++|+++...+.....  +...++||+||+||.|||+...
T Consensus        66 v~~~~dl~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~DPdGn~iE~~~~~  119 (132)
T d1kw3b1          66 VDDAAALERMADKLRQAGVAFTRGDEALMQQRKVMGLLCLQDPFGLPLEIYYGP  119 (132)
T ss_dssp             CSSHHHHHHHHHHHHHHTCCCEECCHHHHHHHTCSEEEEEECTTSCEEEEEECC
T ss_pred             eccHHHHHHHHHHHHHcCCCceecCccccccCCcceEEEEECCCCCEEEEEECC
Confidence            95   4788999999999998876654321  1123578999999999998764

>d1f1ua1 d.32.1.3 (A:2-147) Homoprotocatechuate 2,3-dioxygenase {Arthrobacter globiformis [TaxId: 1665]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Homoprotocatechuate 2,3-dioxygenase
species: Arthrobacter globiformis [TaxId: 1665]

Probab=99.73  E-value=2.1e-17  Score=123.53  Aligned_cols=121  Identities=20%  Similarity=0.207  Sum_probs=88.9

Q ss_pred             CCceeeeeeeCCchhhHHHHHHhcCCeeeeeccCcccceeeeeeccCCCCcceEEEEeEecCceeeccCceeeEEEEEec
Q 022831          152 EPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAISTD  231 (291)
Q Consensus       152 ~~~~hv~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~~hia~~v~  231 (291)
                      .+|+||.|.|+|++++++||+++|||+.......     ...+... +......+.+..       ...+++.|++|.+.
T Consensus        15 ~rl~hv~l~v~Dl~~s~~FY~~~lG~~~~~~~~~-----~~~~~~~-~~~~~~~~~~~~-------~~~~~~~h~~~~~~   81 (146)
T d1f1ua1          15 VRCAYMEIVVTDLAKSREFYVDVLGLHVTEEDEN-----TIYLRSL-EEFIHHNLVLRQ-------GPIAAVAAFAYRVK   81 (146)
T ss_dssp             EEEEEEEEEESCHHHHHHHHTTTTCCEEEEECSS-----EEEEECT-TCCSSCSEEEEE-------CSSCEEEEEEEEES
T ss_pred             cEEeEEEEEeCCHHHHHHHHHhccCcEEEeecCC-----ceeeecc-cccccceeeccc-------cCCCCCceeeEeec
Confidence            4589999999999999999999999998876321     1222222 222223333322       12458899999997


Q ss_pred             ---ChHHHHHHHHHHHHhhCCeeeecccccCCCCceEEEEECCCCCeEEEEechhhhhhhh
Q 022831          232 ---DVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNEDFLKELQ  289 (291)
Q Consensus       232 ---di~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~~~~~~~~  289 (291)
                         |++++.++|    +++|+++...|.....+.++.+||+|||||+|||+...+.+..+.
T Consensus        82 ~~~dl~~~~~~l----~~~G~~~~~~~~~~~~g~~~~~~~~DPdG~~iEl~~~~e~~~~~~  138 (146)
T d1f1ua1          82 SPAEVDAAEAYY----KELGCRTERRKEGFTKGIGDSVRVEDPLGFPYEFFYETEHVERLT  138 (146)
T ss_dssp             SHHHHHHHHHHH----HHTTCCEEEETTCSSTTBCSEEEEECTTSCEEEEECCBCCCCCCT
T ss_pred             cchhHHHHHHHH----HHcCCceeeccccccCCceEEEEEECCCCcEEEEEEeccccCccc
Confidence               466677777    999999998888776655688999999999999998776665543

>d1twua_ d.32.1.8 (A:) Hypothetical protein YycE {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Hypothetical protein YycE
domain: Hypothetical protein YycE
species: Bacillus subtilis [TaxId: 1423]

Probab=99.72  E-value=3.5e-17  Score=120.98  Aligned_cols=124  Identities=16%  Similarity=0.274  Sum_probs=89.5

Q ss_pred             ccceeeEEEEe----CCHHHHHHHHHHhcCCEEEEEeccCCCceeeEEeeccCCCcceEEEeeecCCCCcccCCCCceEE
Q 022831           21 KRRLLHAVYRV----GDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHL   96 (291)
Q Consensus        21 ~~~i~hv~l~v----~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~g~~~~~i   96 (291)
                      +.+|.|+.+.|    +|++++++||+++|||++..+.... ..+..+++..+  ...+.+.+...........+.+..|+
T Consensus         3 ~~~~~~~~~RVa~pv~Dle~s~~FY~~vLG~~~~~~~~~~-~~~~~~~~~~~--~~~~~l~~~~~~~~~~~~~~~~~~hl   79 (137)
T d1twua_           3 FSSFQAAQIRIARPTGQLDEIIRFYEEGLCLKRIGEFSQH-NGYDGVMFGLP--HADYHLEFTQYEGGSTAPVPHPDSLL   79 (137)
T ss_dssp             CSSCBCSCEEEEEECSCHHHHHHHHTTTSCCCEEEEEEEE-TTEEEEEEESS--SSSEEEEEEEETTCCCCCCCCTTCEE
T ss_pred             cCCCceEEEEEecccCCHHHHHHHHHhccCCceeeeeccc-cceeEEEecCC--CCceeeecccccccccccccccCceE
Confidence            44555655555    7999999999999999998765443 34456666644  33455666665554444455577899


Q ss_pred             EEEECC---HHHHHHHHHHcCCeeeeCCccCCCCceEEEEEECCCCcEEEEEecCC
Q 022831           97 AIATED---VYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFELIQRGP  149 (291)
Q Consensus        97 ~~~v~d---~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dP~G~~iel~~~~~  149 (291)
                      +|.|+|   +++++++|+++|+++..++.+. ++.+ .+||+||||++|||.....
T Consensus        80 af~v~~~~dv~~~~~~l~~~G~~~~~~~~~~-~~~~-~~~f~DPDG~~Iel~~~~~  133 (137)
T d1twua_          80 VFYVPNAVELAAITSKLKHMGYQEVESENPY-WSNG-GVTIEDPDGWRIVFMNSKG  133 (137)
T ss_dssp             EEECCCHHHHHHHHHHHHHTTCCEECCSSHH-HHSS-EEEEECTTCCEEEEESSCC
T ss_pred             EEEeCCHHHHHHHHHHHHHCCCeEeCCCCCC-CCce-EEEEECCCCCEEEEEcCCC
Confidence            999876   7788999999999988665433 3334 3789999999999997653

>d1sp8a1 d.32.1.3 (A:36-207) 4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Zea mays) [TaxId: 4577]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Corn (Zea mays) [TaxId: 4577]

Probab=99.72  E-value=3.5e-17  Score=125.75  Aligned_cols=132  Identities=15%  Similarity=0.133  Sum_probs=98.2

Q ss_pred             CcCCccceeeEEEEeCCHHHHHHHHHHhcCCEEEEEeccCCCceeeEEeeccCCCcceEEEeeecCCCCc----------
Q 022831           17 PKKDKRRLLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTS----------   86 (291)
Q Consensus        17 ~~~~~~~i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~----------   86 (291)
                      .+..+++++||.|.|+|++++++||+++|||++..+.....+........++.....+.+..........          
T Consensus         7 d~~~i~~~~Hi~i~V~D~e~a~~FY~~~LGf~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (172)
T d1sp8a1           7 DRFHTLAFHHVELWCADAASAAGRFSFGLGAPLAARSDLSTGNSAHASLLLRSGSLSFLFTAPYAHGADAATAALPSFSA   86 (172)
T ss_dssp             CSSCEEEEEEEEEECSCHHHHHHHHHHHHTCCEEEEESGGGTCCSEEEEEEEETTEEEEEEEECCSSCCGGGCSSTTCCH
T ss_pred             ccCCcCEEEEEEEEeCCHHHHHHHHHHhhCceEEEEecccccceeEEEEEeccCCeeeEEeeccCCCchhhhcccccCCc
Confidence            4467899999999999999999999999999998876655443333333333333333332222111000          


Q ss_pred             -------ccCCCCceEEEEEECCHHHHHHHHHHcCCeeeeCCccCCCCceEEEEEECCCCcEEEEEecCC
Q 022831           87 -------YDIGTGFGHLAIATEDVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFELIQRGP  149 (291)
Q Consensus        87 -------~~~g~~~~~i~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dP~G~~iel~~~~~  149 (291)
                             ...+.|+.||||.|+|+++++++|+++|+++..+|....+|. ++++++.|.+..++|++...
T Consensus        87 ~~~~~~~~~~g~Gi~Hiaf~VdDi~aa~~~l~~~Ga~~~~~P~~~~~g~-~~a~v~~~g~~~~~lve~~~  155 (172)
T d1sp8a1          87 AAARRFAADHGLAVRAVALRVADAEDAFRASVAAGARPAFGPVDLGRGF-RLAEVELYGDVVLRYVSYPD  155 (172)
T ss_dssp             HHHHHHHHHHSSEEEEEEEEESCHHHHHHHHHTTTCCEEEEEEEEETTE-EEEEEEEETTEEEEEEECCT
T ss_pred             chhhhhhhhcCCceEEEEEeeCcHHHHHHHHHHCcCEeccCCccCCCCE-EEEEEECCCCcEEEEEecCC
Confidence                   014679999999999999999999999999999988877764 46889999999999999875

>d1kw3b2 d.32.1.3 (B:133-288) 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme) {Pseudomonas sp. [TaxId: 306]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme)
species: Pseudomonas sp. [TaxId: 306]

Probab=99.71  E-value=6.9e-17  Score=121.94  Aligned_cols=123  Identities=14%  Similarity=0.122  Sum_probs=87.0

Q ss_pred             CCCceeeeeeeCCchhhHHHHHHhcCCeeeeeccCc---ccceeeeeeccCCCCcceEEEEeEecCceeeccCceeeEEE
Q 022831          151 PEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSP---ELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVA  227 (291)
Q Consensus       151 ~~~~~hv~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~~hia  227 (291)
                      +..|.|++|.|+|++++++||+++|||+++.....+   +......++..+..  +..+.+..      .+..++++|++
T Consensus         8 ~~GlgHv~l~v~D~e~t~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~~~~~~~--~h~~a~~~------~~~~~gl~Hia   79 (156)
T d1kw3b2           8 DQGIGHFVRCVPDTAKAMAFYTEVLGFVLSDIIDIQMGPETSVPAHFLHCNGR--HHTIALAA------FPIPKRIHHFM   79 (156)
T ss_dssp             GGCSCEEEEECSCHHHHHHHHHHTTCCEEEEEEEEEEETTEEEEEEEEESSSB--SCSEEEEC------CSCSSSEEEEE
T ss_pred             CCCcceEEEecCCHHHHHHHHHHhcCceeeeEEeeccCCCCcceeEEEeeccc--cceeeecc------CCCCCceeEEE
Confidence            356999999999999999999999999988764322   12233445543332  23333322      12245899999


Q ss_pred             EEecChHHHHHHHHHHHHhhCCeeeecccccCCCCceEEEEECCCCC-eEEEEechh
Q 022831          228 ISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGW-KTVLVDNED  283 (291)
Q Consensus       228 ~~v~di~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~-~iel~~~~~  283 (291)
                      |+|++++++.+..+ +++++|..+ ..|+++..+...++|++||||+ .+|+.....
T Consensus        80 f~v~~~ddv~~~~d-~l~~~G~~~-~g~~rH~~~~~~s~Y~~DP~G~~~~E~~~~~~  134 (156)
T d1kw3b2          80 LQANTIDDVGYAFD-RLDAAGRIT-SLLGRHTNDQTLSFYADTPSPMIEVEFGWGPR  134 (156)
T ss_dssp             EEBSSHHHHHHHHH-HHHHTTCBC-BCSEEESSSCCEEEEEECSSTTCEEEEEECCC
T ss_pred             EECCCHHHHHHHHH-HHHhcCCce-ecCcccCCCCeEEEEEECCCCCeEEEEecCCc
Confidence            99987776655442 239999864 6788887666789999999998 599977543

>d1nkia_ d.32.1.2 (A:) Fosfomycin resistance protein A (FosA) {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Fosfomycin resistance protein A (FosA)
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.71  E-value=1.4e-16  Score=117.22  Aligned_cols=112  Identities=22%  Similarity=0.309  Sum_probs=79.2

Q ss_pred             CccceeeEEEEeCCHHHHHHHHHHhcCCEEEEEeccCCCceeeEEeeccCCCcceEEEeeecCCCCcccCCCCceEEEEE
Q 022831           20 DKRRLLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHLAIA   99 (291)
Q Consensus        20 ~~~~i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~g~~~~~i~~~   99 (291)
                      |+.+|+||+|.|+|++++++||+++||+++..+...      ..++..+.    ..+........  .....+..|++|.
T Consensus         1 mi~~i~Hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~------~~~~~~~~----~~~~~~~~~~~--~~~~~~~~h~~~~   68 (134)
T d1nkia_           1 MLTGLNHLTLAVADLPASIAFYRDLLGFRLEARWDQ------GAYLELGS----LWLCLSREPQY--GGPAADYTHYAFG   68 (134)
T ss_dssp             CEEEEEEEEEEESCHHHHHHHHHHTTCCEEEEEETT------EEEEEETT----EEEEEEECTTC--CCCCSSSCEEEEE
T ss_pred             CCCcEeEEEEEeCCHHHHHHHHHHhhCCeEEEeccc------eeeeecCC----eEEEEeeeccc--cccccccccchhc
Confidence            788999999999999999999999999999876442      44555432    12222221111  1122245566666


Q ss_pred             E--CCHHHHHHHHHHcCCeeeeCCccCCCCceEEEEEECCCCcEEEEEec
Q 022831          100 T--EDVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFELIQR  147 (291)
Q Consensus       100 v--~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dP~G~~iel~~~  147 (291)
                      +  +|+++++++|+++|+++...+.   ++.+ .+||+|||||.|||...
T Consensus        69 ~~~~dl~~~~~~l~~~G~~~~~~~~---~~~~-~~~f~DPdGn~iEl~~~  114 (134)
T d1nkia_          69 IAAADFARFAAQLRAHGVREWKQNR---SEGD-SFYFLDPDGHRLEAHVG  114 (134)
T ss_dssp             ECHHHHHHHHHHHHHTTCCEEECCC---SSSC-EEEEECTTCCEEEEESC
T ss_pred             cccchHHHHHHHHHHCCCcCccCCC---ccee-EEEEECCCCCEEEEEEC
Confidence            5  6899999999999999765432   2223 47899999999999754

>d1xqaa_ d.32.1.2 (A:) Hypothetical protein BC3580 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Hypothetical protein BC3580
species: Bacillus cereus [TaxId: 1396]

Probab=99.71  E-value=7.1e-17  Score=115.09  Aligned_cols=108  Identities=19%  Similarity=0.237  Sum_probs=78.0

Q ss_pred             cceeeEEEEeCCHHHHHHHHHHhcCCEEEEEeccCCCceeeEEeeccCCCcceEEEeeecCCCCcccCCCCceEEEEEEC
Q 022831           22 RRLLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHLAIATE  101 (291)
Q Consensus        22 ~~i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~g~~~~~i~~~v~  101 (291)
                      ++|+||.|.|+|++++++||+++|||++..+...   .  ..++. ++  ....+.+......    ..++..|++|.|+
T Consensus         2 m~i~Hi~l~v~Dl~~a~~FY~~~lG~~~~~~~~~---~--~~~~~-~~--~~~~~~~~~~~~~----~~~~~~h~~f~v~   69 (113)
T d1xqaa_           2 MGIKHLNLTVADVVAAREFLEKYFGLTCSGTRGN---A--FAVMR-DN--DGFILTLMKGKEV----QYPKTFHVGFPQE   69 (113)
T ss_dssp             CCCCEEEEEESCHHHHHHHHHHHHCCEEEEEETT---T--EEEEE-CT--TCCEEEEEECSSC----CCCTTCCEEEECS
T ss_pred             CcccEEEEEeCCHHHHHHHHHHhhCCEEEEeecC---c--ceeee-ec--ceeeeeeeeeecc----cccccceeeeeec
Confidence            7899999999999999999999999999876432   1  33333 22  2344544443221    2236789999998


Q ss_pred             C---HHHHHHHHHHcCCeeeeCCccCCCCceEEEEEECCCCcEEEEE
Q 022831          102 D---VYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFELI  145 (291)
Q Consensus       102 d---~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dP~G~~iel~  145 (291)
                      |   +++++++++++|+++...+.  ..  ...+|++||+|+.|||.
T Consensus        70 ~~~~v~~~~~~l~~~G~~~~~~~~--~~--~~~~~~~DPdG~~iEi~  112 (113)
T d1xqaa_          70 SEEQVDKINQRLKEDGFLVEPPKH--AH--AYTFYVEAPGGFTIEVM  112 (113)
T ss_dssp             SHHHHHHHHHHHHHTTCCCCCCEE--C---CEEEEEEETTTEEEEEE
T ss_pred             cccchhhhhhhHHHcCCccccCCC--Cc--eEEEEEECCCCCEEEEE
Confidence            7   67789999999999765432  22  23478999999999984

>d1r9ca_ d.32.1.2 (A:) Fosfomycin resistance protein FosX {Mesorhizobium loti [TaxId: 381]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Fosfomycin resistance protein FosX
species: Mesorhizobium loti [TaxId: 381]

Probab=99.71  E-value=8.7e-17  Score=117.64  Aligned_cols=122  Identities=18%  Similarity=0.220  Sum_probs=83.6

Q ss_pred             CceeeeeeeCCchhhHHHHHHhcCCeeeeeccCccc-ceeeeeeccCCCCcceEEEEeEecCceeeccCceeeEEEEEec
Q 022831          153 PLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPEL-KCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAISTD  231 (291)
Q Consensus       153 ~~~hv~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~~hia~~v~  231 (291)
                      .|+|++|.|+|++++.+||+++|||++....+.... .....++..+    ...+.+.....    ....+..|++|.++
T Consensus         4 ~i~Hi~l~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~----~~~~~~~~~~f~v~   75 (130)
T d1r9ca_           4 GLSHMTFIVRDLERMTRILEGVFDAREVYASDTEQFSLSREKFFLIG----DIWVAIMQGEK----LAERSYNHIAFKID   75 (130)
T ss_dssp             EEEEEEEEESCHHHHHHHHHHHHCCEEEEEGGGSTTCCSCEEEEEET----TEEEEEEECCC----CSSCCSCEEEEECC
T ss_pred             cEeEEEEEeCCHHHHHHHHHHhcCCEEEEEcCCccccceeEEEEecC----CEEEeeccccc----ccccceeeeeeccc
Confidence            489999999999999999999999998876543321 1222223322    24444443222    12456788898775


Q ss_pred             --ChHHHHHHHHHHHHhhCCeeeecccccCCCCceEEEEECCCCCeEEEEechhhhhhh
Q 022831          232 --DVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNEDFLKEL  288 (291)
Q Consensus       232 --di~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~~~~~~~  288 (291)
                        |++++++++    +++|+++..++....+ +.+.+||+|||||+|||.... +-..|
T Consensus        76 ~~dv~~~~~~l----~~~gv~i~~~~~~~~~-~~~~~~~~DPdGn~iEl~~~~-~~~r~  128 (130)
T d1r9ca_          76 DADFDRYAERV----GKLGLDMRPPRPRVEG-EGRSIYFYDDDNHMFELHTGT-LTERL  128 (130)
T ss_dssp             GGGHHHHHHHH----HHHTCCBCCCCC------CCEEEEECTTSCEEEEECCC-HHHHH
T ss_pred             HHHHHHHHHHH----HHCCCeEecCCcccCC-CEEEEEEECCCCCEEEEEECC-HHHhh
Confidence              799999999    9999998776554443 468899999999999998754 34333

>d2c21a1 d.32.1.1 (A:3-141) Glyoxalase I (lactoylglutathione lyase) {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Glyoxalase I (lactoylglutathione lyase)
domain: Glyoxalase I (lactoylglutathione lyase)
species: Leishmania major [TaxId: 5664]

Probab=99.70  E-value=5e-16  Score=114.27  Aligned_cols=122  Identities=54%  Similarity=0.920  Sum_probs=87.7

Q ss_pred             cceeeEEEEeCCHHHHHHHHHHhcCCEEEEEeccCCCceeeEEeeccCCCcceEEEeeecCCCCcccCCCCceEEEEEEC
Q 022831           22 RRLLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHLAIATE  101 (291)
Q Consensus        22 ~~i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~g~~~~~i~~~v~  101 (291)
                      ++|.||.|.|+|++++++||+++|||++........................................+....++++.++
T Consensus         2 ~r~~Hv~l~V~Dl~~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (139)
T d2c21a1           2 RRMLHTMIRVGDLDRSIKFYTERLGMKVLRKWDVPEDKYTLVFLGYGPEMSSTVLELTYNYGVTSYKHDEAYGHIAIGVE   81 (139)
T ss_dssp             CEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEEGGGTEEEEEEESSCTTTSCEEEEEEETTCCCCCCCSSEEEEEEEES
T ss_pred             CceEEEEEEeCCHHHHHHHHHHHhCCEeeccccccccceeeeeecccccccccccccccccCcccccCCCccceeeeehh
Confidence            68999999999999999999999999998876655544444444332222222222222223333334456778999999


Q ss_pred             CHHHHHHHHHHcCCeeeeCCccCCCCceEEEEEECCCCcEEEEEecC
Q 022831          102 DVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFELIQRG  148 (291)
Q Consensus       102 d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dP~G~~iel~~~~  148 (291)
                      +++++++++...+.++...+    ++.. ++||+|||||+|||++..
T Consensus        82 ~~~~~~~~~~~~~~~~~~~~----~g~~-~~~~~DPdGn~iEl~~~~  123 (139)
T d2c21a1          82 DVKELVADMRKHDVPIDYED----ESGF-MAFVVDPDGYYIELLNEK  123 (139)
T ss_dssp             CHHHHHHHHHHTTCCEEEEC----SSSS-EEEEECTTSCEEEEEEHH
T ss_pred             hHHHHHHHHHHcCCceeeCC----CCcE-EEEEECCCCCEEEEEECC
Confidence            99999999999999876543    3434 589999999999999854

>d1mpya1 d.32.1.3 (A:1-145) Catechol 2,3-dioxygenase (metapyrocatechase) {Pseudomonas putida, mt2 [TaxId: 303]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Catechol 2,3-dioxygenase (metapyrocatechase)
species: Pseudomonas putida, mt2 [TaxId: 303]

Probab=99.70  E-value=9.4e-17  Score=119.77  Aligned_cols=117  Identities=20%  Similarity=0.257  Sum_probs=81.4

Q ss_pred             CccceeeEEEEeCCHHHHHHHHHHhcCCEEEEEeccCCCceeeEEeeccCCCcceEEEeeecCCCCcccCCCCceEEEEE
Q 022831           20 DKRRLLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHLAIA   99 (291)
Q Consensus        20 ~~~~i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~g~~~~~i~~~   99 (291)
                      .|++|+||.|.|+|++++++||+++|||++..+...  .   ..+...........+.+....       ..+..++++.
T Consensus         4 ~i~rl~Hv~l~v~D~~~s~~FY~~vLG~~~~~~~~~--~---~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~   71 (145)
T d1mpya1           4 GVMRPGHVQLRVLDMSKALEHYVELLGLIEMDRDDQ--G---RVYLKAWTEVDKFSLVLREAD-------EPGMDFMGFK   71 (145)
T ss_dssp             SEEEEEEEEEEESCHHHHHHHHHHTTCCEEEEECTT--S---CEEEECTTCCBSCSEEEEECS-------SCEEEEEEEE
T ss_pred             CCcEeeeEEEEeCCHHHHHHHHHHhhCCEEEEeecc--C---ccceecccccceeeccccccC-------cccceeeeee
Confidence            489999999999999999999999999999865332  1   112222122222222222221       1244566665


Q ss_pred             E---CCHHHHHHHHHHcCCeeeeCCccCCCCceEEEEEECCCCcEEEEEecC
Q 022831          100 T---EDVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFELIQRG  148 (291)
Q Consensus       100 v---~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dP~G~~iel~~~~  148 (291)
                      +   +|+++++++|+++|+++...+.....|...++||+|||||.|||+...
T Consensus        72 ~~~~~dl~~~~~~L~~~g~~~~~~~~~~~~g~~~~~~f~DPdG~~iEl~~~~  123 (145)
T d1mpya1          72 VVDEDALRQLERDLMAYGCAVEQLPAGELNSCGRRVRFQAPSGHHFELYADK  123 (145)
T ss_dssp             ESCHHHHHHHHHHHHHHTCCCEEECTTSSTTBCCEEEEECTTSCEEEEESCB
T ss_pred             ehhHHHHHHHHHHHHHCCCcEEECCCcccCCceEEEEEECCCCCEEEEEEec
Confidence            5   579999999999999987666555444444689999999999998754

>d1xqaa_ d.32.1.2 (A:) Hypothetical protein BC3580 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Hypothetical protein BC3580
species: Bacillus cereus [TaxId: 1396]

Probab=99.70  E-value=6.8e-17  Score=115.20  Aligned_cols=108  Identities=19%  Similarity=0.178  Sum_probs=77.0

Q ss_pred             CceeeeeeeCCchhhHHHHHHhcCCeeeeeccCcccceeeeeeccCCCCcceEEEEeEecCceeeccCceeeEEEEEecC
Q 022831          153 PLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAISTDD  232 (291)
Q Consensus       153 ~~~hv~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~~hia~~v~d  232 (291)
                      +|+||.|.|+|++++++||+++|||++..+.+.     ..++...+   ....+.+......    ..++..|++|.|+|
T Consensus         3 ~i~Hi~l~v~Dl~~a~~FY~~~lG~~~~~~~~~-----~~~~~~~~---~~~~~~~~~~~~~----~~~~~~h~~f~v~~   70 (113)
T d1xqaa_           3 GIKHLNLTVADVVAAREFLEKYFGLTCSGTRGN-----AFAVMRDN---DGFILTLMKGKEV----QYPKTFHVGFPQES   70 (113)
T ss_dssp             CCCEEEEEESCHHHHHHHHHHHHCCEEEEEETT-----TEEEEECT---TCCEEEEEECSSC----CCCTTCCEEEECSS
T ss_pred             cccEEEEEeCCHHHHHHHHHHhhCCEEEEeecC-----cceeeeec---ceeeeeeeeeecc----cccccceeeeeecc
Confidence            589999999999999999999999998765432     12233322   1344555443221    23467899999987


Q ss_pred             ---hHHHHHHHHHHHHhhCCeeeecccccCCCCceEEEEECCCCCeEEEEe
Q 022831          233 ---VYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVD  280 (291)
Q Consensus       233 ---i~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iel~~  280 (291)
                         ++++.+++    +++|+++..+|.  .  +++.+||+|||||.|||+.
T Consensus        71 ~~~v~~~~~~l----~~~G~~~~~~~~--~--~~~~~~~~DPdG~~iEi~c  113 (113)
T d1xqaa_          71 EEQVDKINQRL----KEDGFLVEPPKH--A--HAYTFYVEAPGGFTIEVMC  113 (113)
T ss_dssp             HHHHHHHHHHH----HHTTCCCCCCEE--C---CEEEEEEETTTEEEEEEC
T ss_pred             ccchhhhhhhH----HHcCCccccCCC--C--ceEEEEEECCCCCEEEEEC
Confidence               45566666    999999766543  2  3578999999999999973

>d1mpya1 d.32.1.3 (A:1-145) Catechol 2,3-dioxygenase (metapyrocatechase) {Pseudomonas putida, mt2 [TaxId: 303]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Catechol 2,3-dioxygenase (metapyrocatechase)
species: Pseudomonas putida, mt2 [TaxId: 303]

Probab=99.70  E-value=3.3e-17  Score=122.28  Aligned_cols=117  Identities=17%  Similarity=0.220  Sum_probs=81.3

Q ss_pred             CceeeeeeeCCchhhHHHHHHhcCCeeeeeccCcccceeeeeeccCCCCcceEEEEeEecCceeeccCceeeEEEEEe--
Q 022831          153 PLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAIST--  230 (291)
Q Consensus       153 ~~~hv~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~~hia~~v--  230 (291)
                      +|.||.|.|+|++++.+||+++|||++..+....  .....+.   .......+.+...       ..++..|+++.+  
T Consensus         7 rl~Hv~l~v~D~~~s~~FY~~vLG~~~~~~~~~~--~~~~~~~---~~~~~~~~~~~~~-------~~~~~~~~~~~~~~   74 (145)
T d1mpya1           7 RPGHVQLRVLDMSKALEHYVELLGLIEMDRDDQG--RVYLKAW---TEVDKFSLVLREA-------DEPGMDFMGFKVVD   74 (145)
T ss_dssp             EEEEEEEEESCHHHHHHHHHHTTCCEEEEECTTS--CEEEECT---TCCBSCSEEEEEC-------SSCEEEEEEEEESC
T ss_pred             EeeeEEEEeCCHHHHHHHHHHhhCCEEEEeeccC--ccceecc---cccceeecccccc-------Ccccceeeeeeehh
Confidence            5899999999999999999999999988663221  1111111   2222233333221       123445655555  


Q ss_pred             -cChHHHHHHHHHHHHhhCCeeeecccccCCCCceEEEEECCCCCeEEEEechhhh
Q 022831          231 -DDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNEDFL  285 (291)
Q Consensus       231 -~di~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~~~~  285 (291)
                       +|+++++++|    +++|+++...|.....+.++.+||+|||||.|||+...+..
T Consensus        75 ~~dl~~~~~~L----~~~g~~~~~~~~~~~~g~~~~~~f~DPdG~~iEl~~~~e~~  126 (145)
T d1mpya1          75 EDALRQLERDL----MAYGCAVEQLPAGELNSCGRRVRFQAPSGHHFELYADKEYT  126 (145)
T ss_dssp             HHHHHHHHHHH----HHHTCCCEEECTTSSTTBCCEEEEECTTSCEEEEESCBCBC
T ss_pred             HHHHHHHHHHH----HHCCCcEEECCCcccCCceEEEEEECCCCCEEEEEEecccc
Confidence             5677788888    99999998888765554568999999999999999876543

>d2pjsa1 d.32.1.2 (A:3-113) Uncharacterized protein Atu1953 {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Uncharacterized protein Atu1953
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=99.70  E-value=5.3e-17  Score=115.32  Aligned_cols=110  Identities=17%  Similarity=0.204  Sum_probs=80.6

Q ss_pred             cceeeEEEEeCCHHHHHHHHHHhcCCEEEEEeccCCCceeeEEeeccCCCcceEEEeeecCCCCcccCCCCceEEEEEEC
Q 022831           22 RRLLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHLAIATE  101 (291)
Q Consensus        22 ~~i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~g~~~~~i~~~v~  101 (291)
                      ++| +..|.|+|++++++||+++|||++......      ...+..+. .....+......     ..+.+..+++|.++
T Consensus         2 ~ri-~~~l~v~d~~~a~~FY~~~lG~~~~~~~~~------~~~~~~~~-~~~~~~~~~~~~-----~~~~~~~~~~~~~~   68 (111)
T d2pjsa1           2 RRV-VANIATPEPARAQAFYGDILGMPVAMDHGW------IVTHASPL-EAHAQVSFAREG-----GSGTDVPDLSIEVD   68 (111)
T ss_dssp             EEE-EEEEECSCGGGGHHHHTTTTCCCEEEECSS------EEEEEEEE-EEEEEEEEESSS-----BTTBCCCSEEEEES
T ss_pred             eEE-EEEEEeCCHHHHHHHHHHhhCCceeecccc------eeEecccc-ccceeeeccccc-----CCCCceeEEEEEec
Confidence            455 688999999999999999999998765321      22332211 112222222111     12235568999999


Q ss_pred             CHHHHHHHHHHcCCeeeeCCccCCCCceEEEEEECCCCcEEEEE
Q 022831          102 DVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFELI  145 (291)
Q Consensus       102 d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dP~G~~iel~  145 (291)
                      |+++++++++++|+++..+|...++|.+. ++++||+||.||++
T Consensus        69 dvd~~~~~l~~~g~~~~~~p~~~~~g~~~-~~~~DP~Gn~iei~  111 (111)
T d2pjsa1          69 NFDEVHARILKAGLPIEYGPVTEAWGVQR-LFLRDPFGKLINIL  111 (111)
T ss_dssp             CHHHHHHHHHHTTCCCSEEEEECTTSCEE-EEEECTTSCEEEEE
T ss_pred             CHHHHHHHHHhhccccccCCeEcCCCcEE-EEEECCCCCEEEeC
Confidence            99999999999999998888888888765 78999999999985

>d1lgta1 d.32.1.3 (A:2-132) 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme) {Burkholderia cepacia, formerly Pseudomonas cepacia [TaxId: 292]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme)
species: Burkholderia cepacia, formerly Pseudomonas cepacia [TaxId: 292]

Probab=99.70  E-value=5.1e-17  Score=119.11  Aligned_cols=110  Identities=16%  Similarity=0.175  Sum_probs=81.4

Q ss_pred             CceeeeeeeCCchhhHHHHHHhcCCeeeeeccCcccceeeeeeccCCCCcceEEEEeEecCceeeccCceeeEEEEEecC
Q 022831          153 PLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAISTDD  232 (291)
Q Consensus       153 ~~~hv~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~~hia~~v~d  232 (291)
                      .|.||.|.|+|++++++||+++|||++..+.+      ...+++.+..  +..+.+...       ..+++.|++|.|.+
T Consensus         4 ~l~hv~i~V~Dl~~s~~FY~~vLG~~~~~~~~------~~~~l~~~~~--~~~l~l~~~-------~~~~~~h~~f~v~~   68 (131)
T d1lgta1           4 SLGYMGFAVSDVAAWRSFLTQKLGLMEAGTTD------NGDLFRIDSR--AWRIAVQQG-------EVDDLAFAGYEVAD   68 (131)
T ss_dssp             EEEEEEEEESCHHHHHHHHHHTTCCEEEEEET------TEEEEESSSB--SCSEEEEEC-------TTCEEEEEEEEESS
T ss_pred             cccEEEEEeCCHHHHHHHHHHhhCCceeecCC------cceEEeecCC--ceEEEEecC-------CCCCceEEEEEEcc
Confidence            48999999999999999999999999877532      1234444332  334455431       24588999999965


Q ss_pred             ---hHHHHHHHHHHHHhhCCeeeecccccC--CCCceEEEEECCCCCeEEEEec
Q 022831          233 ---VYKSAEVVNLVTQELGGKITRQPGPIP--GLNTKITSFVDPDGWKTVLVDN  281 (291)
Q Consensus       233 ---i~~~~~~l~~~~~~~G~~~~~~p~~~~--~~~~~~~~~~DPdG~~iel~~~  281 (291)
                         ++++.++|    +++|+++...|....  ....+.+||+|||||.||++..
T Consensus        69 ~~dl~~~~~~l----~~~g~~~~~~~~~~~~~~~~~~~~~f~DPdGn~iE~~~~  118 (131)
T d1lgta1          69 AAGLAQMADKL----KQAGIAVTTGDASLARRRGVTGLITFADPFGLPLEIYYG  118 (131)
T ss_dssp             HHHHHHHHHHH----HHTTCCCEECCHHHHHHHTCSEEEEEECTTSCEEEEEEC
T ss_pred             HHHHHHHHHHH----HHcCCceEECCccccccCCceEEEEEECCCCCEEEEEeC
Confidence               55666777    999999998876431  1235789999999999999864

>d1klla_ d.32.1.2 (A:) Mitomycin resistance protein D, MRD {Streptomyces lavendulae [TaxId: 1914]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Mitomycin resistance protein D, MRD
species: Streptomyces lavendulae [TaxId: 1914]

Probab=99.70  E-value=6.3e-17  Score=118.12  Aligned_cols=119  Identities=20%  Similarity=0.187  Sum_probs=82.8

Q ss_pred             CCceeeeeeeCCchhhHHHHHHhcCCeeeeeccCcccceeeeeeccCCCCcceEEEEeEec------CceeeccCceeeE
Q 022831          152 EPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSY------GVTEYTKGNAYAQ  225 (291)
Q Consensus       152 ~~~~hv~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~------~~~~~~~~~g~~h  225 (291)
                      .+|.|++|.|+|++++++||++ |||..........  +......  +   ...+.+....      .....+...+..|
T Consensus         1 ~ri~hv~l~V~D~~~s~~FY~~-Lg~~~~~~~~~~~--~~~~~~~--~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   72 (128)
T d1klla_           1 ARISLFAVVVEDMAKSMEFYRK-MGVEIPAEADSAP--HTEAVLD--G---GIRLAWDTVETVRSYDPEWQAPTGGHRFA   72 (128)
T ss_dssp             CCCCEEEEEESCHHHHHHHHHH-TTCCCCTTGGGCS--EEEEECG--G---GCEEEEEEHHHHHHHCTTCCCCCSSCSCE
T ss_pred             CeEeEEEEEcCCHHHHHHHHHH-hCCcccccccccc--ceeeecc--c---eeeeeecccccccccCCCCCCCcccccee
Confidence            4799999999999999999966 8998765543222  2222222  1   2333332211      0001122335579


Q ss_pred             EEEEecC---hHHHHHHHHHHHHhhCCeeeecccccCCCCceEEEEECCCCCeEEEEechh
Q 022831          226 VAISTDD---VYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNED  283 (291)
Q Consensus       226 ia~~v~d---i~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~~  283 (291)
                      ++|.|++   ++++++++    +++|+++..+|...++ |.+.+|++|||||+|||+++-|
T Consensus        73 l~~~v~~~~~l~~~~~~l----~~~G~~~~~~p~~~~~-G~~~~~~~DPdG~~iel~~p~p  128 (128)
T d1klla_          73 IAFEFPDTASVDKKYAEL----VDAGYEGHLKPWNAVW-GQRYAIVKDPDGNVVDLFAPLP  128 (128)
T ss_dssp             EEEECSSHHHHHHHHHHH----HHTTCEEEEEEEECTT-SEEEEEEECTTSCEEEEEEECC
T ss_pred             EeeeeccchhhHHHHHHH----HhccCccccCCeEcCC-CcEEEEEECCCCCEEEEEecCC
Confidence            9999987   56677888    9999999999987775 5789999999999999998743

>d2pjsa1 d.32.1.2 (A:3-113) Uncharacterized protein Atu1953 {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Uncharacterized protein Atu1953
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=99.69  E-value=9e-17  Score=114.08  Aligned_cols=107  Identities=14%  Similarity=0.141  Sum_probs=78.7

Q ss_pred             eeeeeeCCchhhHHHHHHhcCCeeeeeccCcccceeeeeeccCCCCcceEEEEeEecCceeeccCceeeEEEEEecChHH
Q 022831          156 QVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAISTDDVYK  235 (291)
Q Consensus       156 hv~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~~hia~~v~di~~  235 (291)
                      +..|.|+|++++++||+++|||++....+.    + ..+.. +.   .....+......   ..+++..|++|.++|+++
T Consensus         5 ~~~l~v~d~~~a~~FY~~~lG~~~~~~~~~----~-~~~~~-~~---~~~~~~~~~~~~---~~~~~~~~~~~~~~dvd~   72 (111)
T d2pjsa1           5 VANIATPEPARAQAFYGDILGMPVAMDHGW----I-VTHAS-PL---EAHAQVSFAREG---GSGTDVPDLSIEVDNFDE   72 (111)
T ss_dssp             EEEEECSCGGGGHHHHTTTTCCCEEEECSS----E-EEEEE-EE---EEEEEEEEESSS---BTTBCCCSEEEEESCHHH
T ss_pred             EEEEEeCCHHHHHHHHHHhhCCceeecccc----e-eEecc-cc---ccceeeeccccc---CCCCceeEEEEEecCHHH
Confidence            467999999999999999999998765321    2 22222 11   111111111111   124566899999999999


Q ss_pred             HHHHHHHHHHhhCCeeeecccccCCCCceEEEEECCCCCeEEEE
Q 022831          236 SAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLV  279 (291)
Q Consensus       236 ~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iel~  279 (291)
                      +++++    +++|+++..+|...++ +.+.+|++|||||+|||+
T Consensus        73 ~~~~l----~~~g~~~~~~p~~~~~-g~~~~~~~DP~Gn~iei~  111 (111)
T d2pjsa1          73 VHARI----LKAGLPIEYGPVTEAW-GVQRLFLRDPFGKLINIL  111 (111)
T ss_dssp             HHHHH----HHTTCCCSEEEEECTT-SCEEEEEECTTSCEEEEE
T ss_pred             HHHHH----HhhccccccCCeEcCC-CcEEEEEECCCCCEEEeC
Confidence            99999    9999999999988776 568999999999999986

>d1sqia1 d.32.1.3 (A:8-156) 4-hydroxyphenylpyruvate dioxygenase, HppD {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.69  E-value=5.4e-17  Score=121.74  Aligned_cols=127  Identities=17%  Similarity=0.198  Sum_probs=93.6

Q ss_pred             CceeeeeeeCCchhhHHHHHHhcCCeeeeeccCcccc--eeeeeeccCCCCcceEEEEeEecCcee-------eccCcee
Q 022831          153 PLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELK--CALAMLGYAEEDQTTVLELAYSYGVTE-------YTKGNAY  223 (291)
Q Consensus       153 ~~~hv~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~l~~~~~~~~-------~~~~~g~  223 (291)
                      .++||++.|+|++++.+||+++|||++......+.+.  .....+..+    ...+++........       ...+.|+
T Consensus        11 ~~dHi~i~V~Dl~~a~~fY~~~lGf~~~~~~~~~~~~~~~~~~~~~~~----~~~~~l~~~~~~~~~~~~~~~~~~g~G~   86 (149)
T d1sqia1          11 HFHSVTFWVGNAKQAASFYCNKMGFEPLAYKGLETGSREVVSHVIKQG----KIVFVLCSALNPWNKEMGDHLVKHGDGV   86 (149)
T ss_dssp             EEEEEEEECSCHHHHHHHHHHHHCCEEEEEESGGGTCCSEEEEEEEET----TEEEEEEEESSTTCHHHHHHHHHHCSEE
T ss_pred             eEeEEEEEcCCHHHHHHHHhhccceEEEEEecccCCceEEEEEEecCC----cEEEEEEeccCCCCchhhhhhhhCCCeE
Confidence            4899999999999999999999999987765443322  222223322    34555544322211       1236799


Q ss_pred             eEEEEEecChHHHHHHHHHHHHhhCCeeeecccccC--CCCceEEEEECCCCCeEEEEechhhhhh
Q 022831          224 AQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIP--GLNTKITSFVDPDGWKTVLVDNEDFLKE  287 (291)
Q Consensus       224 ~hia~~v~di~~~~~~l~~~~~~~G~~~~~~p~~~~--~~~~~~~~~~DPdG~~iel~~~~~~~~~  287 (291)
                      +|++|.|+|++++++++    +++|+++..+|....  .+..++++++.|+|..++|+|++.+.++
T Consensus        87 ~hiaf~V~di~~~~~~l----~~~G~~~~~~P~~~~d~~G~v~~a~i~~~g~~~~~lier~~~~g~  148 (149)
T d1sqia1          87 KDIAFEVEDCEHIVQKA----RERGAKIVREPWVEEDKFGKVKFAVLQTYGDTTHTLVEKINYTGR  148 (149)
T ss_dssp             EEEEEEEECHHHHHHHH----HHHTCCEEEEEEEEEETTEEEEEEEEECSTTCEEEEEEEESCCSS
T ss_pred             EEEEEEeccHHHHHHHH----HHCCCEEccCCeEEECCCCeEEEEEEECCCCCEEEEEEeCCCcCC
Confidence            99999999999999999    999999999987542  2223568889999999999999988654

>d1kw3b1 d.32.1.3 (B:1-132) 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme) {Pseudomonas sp. [TaxId: 306]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme)
species: Pseudomonas sp. [TaxId: 306]

Probab=99.68  E-value=7.5e-17  Score=118.35  Aligned_cols=111  Identities=16%  Similarity=0.161  Sum_probs=81.4

Q ss_pred             CCceeeeeeeCCchhhHHHHHHhcCCeeeeeccCcccceeeeeeccCCCCcceEEEEeEecCceeeccCceeeEEEEEec
Q 022831          152 EPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAISTD  231 (291)
Q Consensus       152 ~~~~hv~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~~hia~~v~  231 (291)
                      .+|+||.|.|+|++++++||+++|||++..+..      ...++..++.+  ..+.+...       ..+++.|++|.|.
T Consensus         3 ~~L~hv~i~v~Dl~~s~~FY~~vLG~~~~~~~~------~~~~l~~~~~~--~~l~~~~~-------~~~~~~h~~f~v~   67 (132)
T d1kw3b1           3 ERLGYLGFAVKDVPAWDHFLTKSVGLMAAGSAG------DAALYRADQRA--WRIAVQPG-------ELDDLAYAGLEVD   67 (132)
T ss_dssp             CEEEEEEEEESCHHHHHHHHHHTTCCEEEEEET------TEEEEESSSBS--CSEEEEEC-------TTCEEEEEEEECS
T ss_pred             ccccEEEEEeCCHHHHHHHHHHHhCCceecccc------ceeeeeeeecc--eeeeeecc-------CCCCceEEEEEec
Confidence            468999999999999999999999999876532      12344444332  33444331       2458899999996


Q ss_pred             C---hHHHHHHHHHHHHhhCCeeeecccccCC--CCceEEEEECCCCCeEEEEec
Q 022831          232 D---VYKSAEVVNLVTQELGGKITRQPGPIPG--LNTKITSFVDPDGWKTVLVDN  281 (291)
Q Consensus       232 d---i~~~~~~l~~~~~~~G~~~~~~p~~~~~--~~~~~~~~~DPdG~~iel~~~  281 (291)
                      +   ++++.+++    +++|+++...+.....  ...+.+||+|||||.|||+-.
T Consensus        68 ~~~dl~~~~~~l----~~~g~~~~~~~~~~~~~~~~~~~~~~~DPdGn~iE~~~~  118 (132)
T d1kw3b1          68 DAAALERMADKL----RQAGVAFTRGDEALMQQRKVMGLLCLQDPFGLPLEIYYG  118 (132)
T ss_dssp             SHHHHHHHHHHH----HHHTCCCEECCHHHHHHHTCSEEEEEECTTSCEEEEEEC
T ss_pred             cHHHHHHHHHHH----HHcCCCceecCccccccCCcceEEEEECCCCCEEEEEEC
Confidence            5   55666666    9999999987764321  124678999999999999854

>d1klla_ d.32.1.2 (A:) Mitomycin resistance protein D, MRD {Streptomyces lavendulae [TaxId: 1914]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Mitomycin resistance protein D, MRD
species: Streptomyces lavendulae [TaxId: 1914]

Probab=99.68  E-value=1.7e-16  Score=115.74  Aligned_cols=118  Identities=19%  Similarity=0.146  Sum_probs=83.0

Q ss_pred             cceeeEEEEeCCHHHHHHHHHHhcCCEEEEEeccCCCceeeEEeeccCCCcceEEEeeec------CCCCcccCCCCceE
Q 022831           22 RRLLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYN------YGVTSYDIGTGFGH   95 (291)
Q Consensus        22 ~~i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~------~~~~~~~~g~~~~~   95 (291)
                      .+|+|++|.|+|++++++||++ |||.+.......  .  .+.+..+.   ...+.+...      ........+.+..|
T Consensus         1 ~ri~hv~l~V~D~~~s~~FY~~-Lg~~~~~~~~~~--~--~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   72 (128)
T d1klla_           1 ARISLFAVVVEDMAKSMEFYRK-MGVEIPAEADSA--P--HTEAVLDG---GIRLAWDTVETVRSYDPEWQAPTGGHRFA   72 (128)
T ss_dssp             CCCCEEEEEESCHHHHHHHHHH-TTCCCCTTGGGC--S--EEEEECGG---GCEEEEEEHHHHHHHCTTCCCCCSSCSCE
T ss_pred             CeEeEEEEEcCCHHHHHHHHHH-hCCccccccccc--c--ceeeeccc---eeeeeecccccccccCCCCCCCcccccee
Confidence            3799999999999999999977 899875433322  1  23333221   222322221      11111122235579


Q ss_pred             EEEEECC---HHHHHHHHHHcCCeeeeCCccCCCCceEEEEEECCCCcEEEEEecC
Q 022831           96 LAIATED---VYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFELIQRG  148 (291)
Q Consensus        96 i~~~v~d---~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dP~G~~iel~~~~  148 (291)
                      ++|.|+|   +++++++|+++|+++..+|...++|.+. +|++|||||.|||.++-
T Consensus        73 l~~~v~~~~~l~~~~~~l~~~G~~~~~~p~~~~~G~~~-~~~~DPdG~~iel~~p~  127 (128)
T d1klla_          73 IAFEFPDTASVDKKYAELVDAGYEGHLKPWNAVWGQRY-AIVKDPDGNVVDLFAPL  127 (128)
T ss_dssp             EEEECSSHHHHHHHHHHHHHTTCEEEEEEEECTTSEEE-EEEECTTSCEEEEEEEC
T ss_pred             EeeeeccchhhHHHHHHHHhccCccccCCeEcCCCcEE-EEEECCCCCEEEEEecC
Confidence            9999987   6778999999999999998888887664 89999999999998754

>d1f1ua2 d.32.1.3 (A:148-323) Homoprotocatechuate 2,3-dioxygenase {Arthrobacter globiformis [TaxId: 1665]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Homoprotocatechuate 2,3-dioxygenase
species: Arthrobacter globiformis [TaxId: 1665]

Probab=99.68  E-value=1e-15  Score=117.72  Aligned_cols=120  Identities=21%  Similarity=0.250  Sum_probs=87.3

Q ss_pred             CccceeeEEEEeCCHHHHHHHHHHhcCCEEEEEeccCCCceeeEEeeccCCCcceEEEeeecCCCCcccCCCCceEEEEE
Q 022831           20 DKRRLLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHLAIA   99 (291)
Q Consensus        20 ~~~~i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~g~~~~~i~~~   99 (291)
                      .+++|+||+|.|+|++++++|| ++|||++..+...+.+....+++..+...  ..+.+...       .+++..|++|.
T Consensus         2 ~i~rl~Hv~l~v~Dle~s~~FY-e~LGf~~~d~~~~~~~~~~~~~~~~~~~~--~~l~~~~~-------~~~~~~H~~f~   71 (176)
T d1f1ua2           2 ELVRLDHFNQVTPDVPRGRAYL-EDLGFRVSEDIKDSDGVTYAAWMHRKQTV--HDTALTGG-------NGPRMHHVAFA   71 (176)
T ss_dssp             CCCEEEEEEEEESCHHHHHHHH-HHTTCEEEEEEECTTCCEEEEEEESSSSS--CSEEEEES-------SBSEEEEEEEE
T ss_pred             ceeEeeeEEEEcCCHHHHHHHH-HHCCCEEEEEEecCCcceeeeeeccCccc--cceecccc-------cCCCccceeEE
Confidence            4789999999999999999999 67999998776666655555666543322  22333322       12378999999


Q ss_pred             ECC---HHHHHHHHHHcCCee--eeCCccCCCCceEEEEEECCCCcEEEEEecCC
Q 022831          100 TED---VYKMVENIRAKGGNV--TREPGPLKGMTTHFAFVKDPDGYIFELIQRGP  149 (291)
Q Consensus       100 v~d---~~~~~~~l~~~G~~~--~~~~~~~~~g~~~~~~~~dP~G~~iel~~~~~  149 (291)
                      +.+   +..+.++|.++|+..  ...|.....+...++|++||||++||+.....
T Consensus        72 ~~~~~~v~~~~~~l~~~g~~~~~~~~p~~h~~g~~~~~Y~~DPdG~~iEl~~~~~  126 (176)
T d1f1ua2          72 THEKHNIIQICDKMGALRISDRIERGPGRHGVSNAFYLYILDPDGHRIEIYTQDY  126 (176)
T ss_dssp             CSSHHHHHHHHHHHHHTTCGGGEEEEEEECSTTCCEEEEEECTTCCEEEEEECCC
T ss_pred             eccchhHHHHHHHHHHcCCceeeeecccccCCCCceEEEEECCCCCEEEEEeCCc
Confidence            986   445667899999863  34455555555567899999999999987653

>d1t47a1 d.32.1.3 (A:16-178) 4-hydroxyphenylpyruvate dioxygenase, HppD {Streptomyces avermitilis [TaxId: 33903]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Streptomyces avermitilis [TaxId: 33903]

Probab=99.65  E-value=3.8e-16  Score=118.79  Aligned_cols=128  Identities=16%  Similarity=0.227  Sum_probs=95.4

Q ss_pred             CCceeeeeeeCCchhhHHHHHHhcCCeeeeeccCccc--ceeeeeeccCCCCcceEEEEeEecCcee----------ecc
Q 022831          152 EPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPEL--KCALAMLGYAEEDQTTVLELAYSYGVTE----------YTK  219 (291)
Q Consensus       152 ~~~~hv~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~l~~~~~~~~----------~~~  219 (291)
                      .+|+||.+.|.|++++.+||+++|||++......+..  ......+..+    ...+++....+...          ...
T Consensus         6 ~~idHv~i~V~D~~~a~~fY~~~lGf~~v~~~~~~~~~~~~~~~~l~~~----~~~i~l~~~~~~~~~~~~~~~~~~~~~   81 (163)
T d1t47a1           6 KGMDAVVFAVGNAKQAAHYYSTAFGMQLVAYSGPENGSRETASYVLTNG----SARFVLTSVIKPATPWGHFLADHVAEH   81 (163)
T ss_dssp             CEEEEEEEECSCHHHHHHHHHHTSCCEEEEEESGGGTCCSEEEEEEEET----TEEEEEEEESSCCSHHHHHHHHHHHHH
T ss_pred             ceEeEEEEEeCCHHHHHHHHHHHhCCeEEeeecccccceeEEEEEEecC----CEEEEEeccCCCCCccccccchhhhcC
Confidence            4699999999999999999999999998765433322  2233444432    35566655332211          123


Q ss_pred             CceeeEEEEEecChHHHHHHHHHHHHhhCCeeeecccccCCC--CceEEEEECCCCCeEEEEechhhhhh
Q 022831          220 GNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGL--NTKITSFVDPDGWKTVLVDNEDFLKE  287 (291)
Q Consensus       220 ~~g~~hia~~v~di~~~~~~l~~~~~~~G~~~~~~p~~~~~~--~~~~~~~~DPdG~~iel~~~~~~~~~  287 (291)
                      +.|+.|++|.|+|++++++++    +++|+++..+|......  ..+++++++|+|..++|+++..+...
T Consensus        82 g~G~~hiaf~VdDid~a~~~l----~~~Ga~~~~~P~~~~d~~G~v~~a~I~~~g~~~~~lier~~~~g~  147 (163)
T d1t47a1          82 GDGVVDLAIEVPDARAAHAYA----IEHGARSVAEPYELKDEHGTVVLAAIATYGKTRHTLVDRTGYDGP  147 (163)
T ss_dssp             CSEEEEEEEECSCHHHHHHHH----HHTTCCEEEEEEEEEETTEEEEEEEEECSTTCEEEEEEEEEECSS
T ss_pred             CCceEEEEEeeCCHHHHHHHH----HHCCCeEEecCcceeCCCCEEEEEEEecCCCceEEEEeccCCCCc
Confidence            579999999999999999999    99999999998764322  23578899999999999998776543

>d1nkia_ d.32.1.2 (A:) Fosfomycin resistance protein A (FosA) {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Fosfomycin resistance protein A (FosA)
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.64  E-value=1.5e-15  Score=111.57  Aligned_cols=109  Identities=26%  Similarity=0.278  Sum_probs=75.3

Q ss_pred             CceeeeeeeCCchhhHHHHHHhcCCeeeeeccCcccceeeeeeccCCCCcceEEEEeEecCceeeccCceeeEEEEE--e
Q 022831          153 PLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAIS--T  230 (291)
Q Consensus       153 ~~~hv~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~~hia~~--v  230 (291)
                      .|+||+|.|+|++++.+||+++||+++..+.+.    ..  ++..+    ...+.........  ....+..|++|.  +
T Consensus         4 ~i~Hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~----~~--~~~~~----~~~~~~~~~~~~~--~~~~~~~h~~~~~~~   71 (134)
T d1nkia_           4 GLNHLTLAVADLPASIAFYRDLLGFRLEARWDQ----GA--YLELG----SLWLCLSREPQYG--GPAADYTHYAFGIAA   71 (134)
T ss_dssp             EEEEEEEEESCHHHHHHHHHHTTCCEEEEEETT----EE--EEEET----TEEEEEEECTTCC--CCCSSSCEEEEEECH
T ss_pred             cEeEEEEEeCCHHHHHHHHHHhhCCeEEEeccc----ee--eeecC----CeEEEEeeecccc--ccccccccchhcccc
Confidence            589999999999999999999999998776432    12  22222    1333332222111  122344555554  4


Q ss_pred             cChHHHHHHHHHHHHhhCCeeeecccccCCCCceEEEEECCCCCeEEEEec
Q 022831          231 DDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDN  281 (291)
Q Consensus       231 ~di~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iel~~~  281 (291)
                      +|+++++++|    +++|+++...+  +  ++++.+||+|||||+|||+..
T Consensus        72 ~dl~~~~~~l----~~~G~~~~~~~--~--~~~~~~~f~DPdGn~iEl~~~  114 (134)
T d1nkia_          72 ADFARFAAQL----RAHGVREWKQN--R--SEGDSFYFLDPDGHRLEAHVG  114 (134)
T ss_dssp             HHHHHHHHHH----HHTTCCEEECC--C--SSSCEEEEECTTCCEEEEESC
T ss_pred             chHHHHHHHH----HHCCCcCccCC--C--cceeEEEEECCCCCEEEEEEC
Confidence            7899999999    99999986543  2  236789999999999999874

>d1npba_ d.32.1.2 (A:) Fosfomycin resistance protein A (FosA) {Serratia marcescens [TaxId: 615]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Fosfomycin resistance protein A (FosA)
species: Serratia marcescens [TaxId: 615]

Probab=99.63  E-value=2.1e-15  Score=111.56  Aligned_cols=114  Identities=23%  Similarity=0.305  Sum_probs=79.3

Q ss_pred             CCceeeeeeeCCchhhHHHHHHhcCCeeeeeccCcccceeeeeeccCCCCcceEEEEeEecCceeeccCceeeEEEEEe-
Q 022831          152 EPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAIST-  230 (291)
Q Consensus       152 ~~~~hv~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~~hia~~v-  230 (291)
                      ..|+||+|.|+|++++.+||+++|||++......    .  .++..++  ....+.+...... ......+..|++|.+ 
T Consensus         3 ~~l~Hi~l~v~d~~~~~~FY~~vLG~~~~~~~~~----~--~~~~~~~--~~~~l~~~~~~~~-~~~~~~~~~h~~~~~~   73 (140)
T d1npba_           3 QSLNHLTLAVSDLQKSVTFWHELLGLTLHARWNT----G--AYLTCGD--LWVCLSYDEARQY-VPPQESDYTHYAFTVA   73 (140)
T ss_dssp             CEEEEEEEEESCHHHHHHHHHTTSCCEEEEEETT----E--EEEEETT--EEEEEEECTTCCC-CCGGGSCSCEEEEECC
T ss_pred             CcEeEEEEEeCCHHHHHHHHHHHhCCEEEEEecc----c--ccccccc--ccceeeccccccc-CCCcCCccceeeeech
Confidence            3589999999999999999999999998765321    1  1222221  1223333221111 112234678888887 


Q ss_pred             -cChHHHHHHHHHHHHhhCCeeeecccccCCCCceEEEEECCCCCeEEEEech
Q 022831          231 -DDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNE  282 (291)
Q Consensus       231 -~di~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~  282 (291)
                       +|++++++++    +++|+++...+.    .+++.+||+|||||+|||.+..
T Consensus        74 ~~d~~~~~~~l----~~~Gv~~~~~~~----~~~~~~~~~DPdGn~iEi~~~~  118 (140)
T d1npba_          74 EEDFEPLSQRL----EQAGVTIWKQNK----SEGASFYFLDPDGHKLELHVGS  118 (140)
T ss_dssp             HHHHHHHHHHH----HHTTCCEEECCC----SSSEEEEEECTTCCEEEEEECC
T ss_pred             HHHHHHHHHHH----HHCCCeEeecCC----CCceEEEEECCCCCEEEEEECC
Confidence             5788888888    999999876543    3467899999999999998754

>d1sp8a1 d.32.1.3 (A:36-207) 4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Zea mays) [TaxId: 4577]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Corn (Zea mays) [TaxId: 4577]

Probab=99.62  E-value=8.4e-16  Score=117.87  Aligned_cols=128  Identities=16%  Similarity=0.077  Sum_probs=92.7

Q ss_pred             CceeeeeeeCCchhhHHHHHHhcCCeeeeeccCcccceeeeeeccCCCCcceEEEEeEecC--ce----------e----
Q 022831          153 PLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYG--VT----------E----  216 (291)
Q Consensus       153 ~~~hv~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~--~~----------~----  216 (291)
                      +++||.|.|+|++++++||+++|||++..+.....+............  ...+.+.....  ..          +    
T Consensus        13 ~~~Hi~i~V~D~e~a~~FY~~~LGf~~v~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   90 (172)
T d1sp8a1          13 AFHHVELWCADAASAAGRFSFGLGAPLAARSDLSTGNSAHASLLLRSG--SLSFLFTAPYAHGADAATAALPSFSAAAAR   90 (172)
T ss_dssp             EEEEEEEECSCHHHHHHHHHHHHTCCEEEEESGGGTCCSEEEEEEEET--TEEEEEEEECCSSCCGGGCSSTTCCHHHHH
T ss_pred             EEEEEEEEeCCHHHHHHHHHHhhCceEEEEecccccceeEEEEEeccC--CeeeEEeeccCCCchhhhcccccCCcchhh
Confidence            589999999999999999999999998766443332211211111111  22233322111  00          0    


Q ss_pred             ---eccCceeeEEEEEecChHHHHHHHHHHHHhhCCeeeecccccCCCCceEEEEECCCCCeEEEEechhhhhh
Q 022831          217 ---YTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNEDFLKE  287 (291)
Q Consensus       217 ---~~~~~g~~hia~~v~di~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~~~~~~  287 (291)
                         ...+.|+.|+||+|+|++++++++    +++|+++..+|....+ +.++++++.|.+..++|+++.+....
T Consensus        91 ~~~~~~g~Gi~Hiaf~VdDi~aa~~~l----~~~Ga~~~~~P~~~~~-g~~~a~v~~~g~~~~~lve~~~~~~~  159 (172)
T d1sp8a1          91 RFAADHGLAVRAVALRVADAEDAFRAS----VAAGARPAFGPVDLGR-GFRLAEVELYGDVVLRYVSYPDGAAG  159 (172)
T ss_dssp             HHHHHHSSEEEEEEEEESCHHHHHHHH----HTTTCCEEEEEEEEET-TEEEEEEEEETTEEEEEEECCTTGGG
T ss_pred             hhhhhcCCceEEEEEeeCcHHHHHHHH----HHCcCEeccCCccCCC-CEEEEEEECCCCcEEEEEecCCCCCC
Confidence               113569999999999999999999    9999999999987665 57899999999999999999987664

>d1kw3b2 d.32.1.3 (B:133-288) 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme) {Pseudomonas sp. [TaxId: 306]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme)
species: Pseudomonas sp. [TaxId: 306]

Probab=99.60  E-value=1e-14  Score=109.74  Aligned_cols=120  Identities=19%  Similarity=0.204  Sum_probs=82.1

Q ss_pred             CccceeeEEEEeCCHHHHHHHHHHhcCCEEEEEeccC---CCceeeEEeeccCCCcceEEEeeecCCCCcccCCCCceEE
Q 022831           20 DKRRLLHAVYRVGDLDRTIKYYTECFGMELLRKRDVP---EEKYSNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHL   96 (291)
Q Consensus        20 ~~~~i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~g~~~~~i   96 (291)
                      ...+|+|++|.|+|++++++||+++|||++......+   .......++..+....  .+.+....      ...+++|+
T Consensus         7 ~~~GlgHv~l~v~D~e~t~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~~~~~~~~h--~~a~~~~~------~~~gl~Hi   78 (156)
T d1kw3b2           7 GDQGIGHFVRCVPDTAKAMAFYTEVLGFVLSDIIDIQMGPETSVPAHFLHCNGRHH--TIALAAFP------IPKRIHHF   78 (156)
T ss_dssp             GGGCSCEEEEECSCHHHHHHHHHHTTCCEEEEEEEEEEETTEEEEEEEEESSSBSC--SEEEECCS------CSSSEEEE
T ss_pred             CCCCcceEEEecCCHHHHHHHHHHhcCceeeeEEeeccCCCCcceeEEEeeccccc--eeeeccCC------CCCceeEE
Confidence            4579999999999999999999999999987543221   1222234444432222  22222111      12379999


Q ss_pred             EEEECC---HHHHHHHHHHcCCeeeeCCccCCCCceEEEEEECCCCc-EEEEEecC
Q 022831           97 AIATED---VYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGY-IFELIQRG  148 (291)
Q Consensus        97 ~~~v~d---~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dP~G~-~iel~~~~  148 (291)
                      +|+|+|   +.+++++|+++|+.+. .+.+...+...++|++||+|+ .+|+....
T Consensus        79 af~v~~~ddv~~~~d~l~~~G~~~~-g~~rH~~~~~~s~Y~~DP~G~~~~E~~~~~  133 (156)
T d1kw3b2          79 MLQANTIDDVGYAFDRLDAAGRITS-LLGRHTNDQTLSFYADTPSPMIEVEFGWGP  133 (156)
T ss_dssp             EEEBSSHHHHHHHHHHHHHTTCBCB-CSEEESSSCCEEEEEECSSTTCEEEEEECC
T ss_pred             EEECCCHHHHHHHHHHHHhcCCcee-cCcccCCCCeEEEEEECCCCCeEEEEecCC
Confidence            999976   5557899999998754 455554444557999999998 68987654

>d1sqda1 d.32.1.3 (A:14-180) 4-hydroxyphenylpyruvate dioxygenase, HppD {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.60  E-value=2.6e-15  Score=114.59  Aligned_cols=128  Identities=13%  Similarity=0.087  Sum_probs=90.5

Q ss_pred             CCceeeeeeeCCchhhHHHHHHhcCCeeeeeccCcccceeeeeeccCCCCcceEEEEeEecCce----------------
Q 022831          152 EPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVT----------------  215 (291)
Q Consensus       152 ~~~~hv~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~----------------  215 (291)
                      .+++||.+.|+|++++.+||+++|||+...+...+.+.........+..  ...+.+.......                
T Consensus        11 ~~~dHv~i~V~Dle~a~~fY~~~LGf~~~~~~~~~~~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~~~~~~~~~~~~~~   88 (167)
T d1sqda1          11 KRFHHIEFWCGDATNVARRFSWGLGMRFSAKSDLSTGNMVHASYLLTSG--DLRFLFTAPYSPSLSAGEIKPTTTASIPS   88 (167)
T ss_dssp             EEEEEEEEECSCHHHHHHHHHHHHTCEEEEEESGGGTCSSEEEEEEEET--TEEEEEEEECCGGGTTTCCGGGCCCSSTT
T ss_pred             ceEeEEEEEeCCHHHHHHHHHHHhCCeEEEEeeccCCCeeEEEEEeeCC--CeeEEEecccccccccccccccccccccc
Confidence            4589999999999999999999999998776543322212212111111  1222221111000                


Q ss_pred             -e--------eccCceeeEEEEEecChHHHHHHHHHHHHhhCCeeeecccccCCCCceEEEEECCCCCeEEEEechhhhh
Q 022831          216 -E--------YTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNEDFLK  286 (291)
Q Consensus       216 -~--------~~~~~g~~hia~~v~di~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~~~~~  286 (291)
                       +        ...++|+.|+||.|+|+++++++|    +++|+++..+|....+ +.++++++.+++...+|++++....
T Consensus        89 ~~~~~~~~~~~~~~~G~~Hiaf~VdDi~aa~~~l----~~~G~~~~~~P~~~~~-~~~~a~I~~~gd~~~~~v~r~~~~~  163 (167)
T d1sqda1          89 FDHGSCRSFFSSHGLGVRAVAIEVEDAESAFSIS----VANGAIPSSPPIVLNE-AVTIAEVKLYGDVVLRYVSYKAEDT  163 (167)
T ss_dssp             CCHHHHHHHHHHHCSEEEEEEEEESCHHHHHHHH----HHTTCCEEEEEEEETT-TEEEEEEEEETTEEEEEEEECCC--
T ss_pred             CCcchHHHhhhccCCCceEEEEEeCCHHHHHHHH----HHCCCEEecCCeecCC-CEEEEEEEccCCcEEEEEecCCCcc
Confidence             0        012469999999999999999999    9999999999988765 5788999999999999999876543

>d1ecsa_ d.32.1.2 (A:) Bleomycin resistance protein, BRP {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Bleomycin resistance protein, BRP
species: Klebsiella pneumoniae [TaxId: 573]

Probab=99.56  E-value=6.9e-14  Score=100.40  Aligned_cols=106  Identities=21%  Similarity=0.261  Sum_probs=74.9

Q ss_pred             EEEeCCHHHHHHHHHHhcCCEEEEEeccCCCceeeEEeeccCCCcceEEEeeecCCCCcccCCCCceEEEEEECCHHHHH
Q 022831           28 VYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHLAIATEDVYKMV  107 (291)
Q Consensus        28 ~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~g~~~~~i~~~v~d~~~~~  107 (291)
                      .|.|+|++++++||++ |||++......      ..++..+.  .  .+.+.......+   .....++++.++|+++++
T Consensus         7 ~l~v~Dl~~s~~FY~~-LGf~~~~~~~~------~~~~~~~~--~--~~~~~~~~~~~~---~~~~~~~~~~~~d~~~~~   72 (120)
T d1ecsa_           7 NLPSRDFDSTAAFYER-LGFGIVFRDAG------WMILQRGD--L--MLEFFAHPGLDP---LASWFSCCLRLDDLAEFY   72 (120)
T ss_dssp             EEEESCHHHHHHHHHT-TTCEEEEECSS------EEEEEETT--E--EEEEEECTTCCG---GGCCCEEEEEESCHHHHH
T ss_pred             EEEeCCHHHHHHHHHH-cCCeeEEecCc------eeeeecce--e--cccccccccccc---CCCCcEEEEEECCHHHHH
Confidence            3999999999999988 99999865321      33333222  2  222332222111   123457899999999999


Q ss_pred             HHHHHcCCeeee-------CCccCCCCceEEEEEECCCCcEEEEEecC
Q 022831          108 ENIRAKGGNVTR-------EPGPLKGMTTHFAFVKDPDGYIFELIQRG  148 (291)
Q Consensus       108 ~~l~~~G~~~~~-------~~~~~~~g~~~~~~~~dP~G~~iel~~~~  148 (291)
                      +.++++|+++..       ++...++|.+. ++|+|||||+|+|+|..
T Consensus        73 ~~~~~~~~~~~~~~~~~~~~~~~~~~G~r~-~~~~DPDGn~iei~q~d  119 (120)
T d1ecsa_          73 RQCKSVGIQETSSGYPRIHAPELQGWGGTM-AALVDPDGTLLRLIQNE  119 (120)
T ss_dssp             HHHHHTTCCBCSSSSSEEEEEEECTTSSEE-EEEECTTSCEEEEEECC
T ss_pred             HHHhhhhhhhccccccccccceecCCCcEE-EEEECCCCCEEEEEEcc
Confidence            999999888643       45666777665 79999999999999863

>d1ecsa_ d.32.1.2 (A:) Bleomycin resistance protein, BRP {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Bleomycin resistance protein, BRP
species: Klebsiella pneumoniae [TaxId: 573]

Probab=99.55  E-value=5.1e-14  Score=101.09  Aligned_cols=106  Identities=23%  Similarity=0.305  Sum_probs=74.3

Q ss_pred             eeeeCCchhhHHHHHHhcCCeeeeeccCcccceeeeeeccCCCCcceEEEEeEecCceeeccCceeeEEEEEecChHHHH
Q 022831          158 MLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAISTDDVYKSA  237 (291)
Q Consensus       158 ~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~~hia~~v~di~~~~  237 (291)
                      .|.|+|+++|++||++ |||++......    +......      ...+.+.......   ......++.+.++|+++++
T Consensus         7 ~l~v~Dl~~s~~FY~~-LGf~~~~~~~~----~~~~~~~------~~~~~~~~~~~~~---~~~~~~~~~~~~~d~~~~~   72 (120)
T d1ecsa_           7 NLPSRDFDSTAAFYER-LGFGIVFRDAG----WMILQRG------DLMLEFFAHPGLD---PLASWFSCCLRLDDLAEFY   72 (120)
T ss_dssp             EEEESCHHHHHHHHHT-TTCEEEEECSS----EEEEEET------TEEEEEEECTTCC---GGGCCCEEEEEESCHHHHH
T ss_pred             EEEeCCHHHHHHHHHH-cCCeeEEecCc----eeeeecc------eeccccccccccc---cCCCCcEEEEEECCHHHHH
Confidence            3999999999999987 99998765321    2222211      1333443332221   1234568999999999999


Q ss_pred             HHHHHHHHhhCCeee-------ecccccCCCCceEEEEECCCCCeEEEEech
Q 022831          238 EVVNLVTQELGGKIT-------RQPGPIPGLNTKITSFVDPDGWKTVLVDNE  282 (291)
Q Consensus       238 ~~l~~~~~~~G~~~~-------~~p~~~~~~~~~~~~~~DPdG~~iel~~~~  282 (291)
                      +.+    ++.|+++.       .+|...++ |.+.+||+|||||+|||+|..
T Consensus        73 ~~~----~~~~~~~~~~~~~~~~~~~~~~~-G~r~~~~~DPDGn~iei~q~d  119 (120)
T d1ecsa_          73 RQC----KSVGIQETSSGYPRIHAPELQGW-GGTMAALVDPDGTLLRLIQNE  119 (120)
T ss_dssp             HHH----HHTTCCBCSSSSSEEEEEEECTT-SSEEEEEECTTSCEEEEEECC
T ss_pred             HHH----hhhhhhhccccccccccceecCC-CcEEEEEECCCCCEEEEEEcc
Confidence            999    88777754       34555555 568899999999999999863

>d1cjxa1 d.32.1.3 (A:4-153) 4-hydroxyphenylpyruvate dioxygenase, HppD {Pseudomonas fluorescens [TaxId: 294]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Pseudomonas fluorescens [TaxId: 294]

Probab=99.52  E-value=1.5e-14  Score=107.69  Aligned_cols=127  Identities=11%  Similarity=0.056  Sum_probs=91.6

Q ss_pred             cCCcCCccceeeEEEEeCCHHHHHHHHHHhcCCEEEEEeccCCCceeeEEeeccCCCcceEEEeeecCCCC--c--ccCC
Q 022831           15 EWPKKDKRRLLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVT--S--YDIG   90 (291)
Q Consensus        15 ~~~~~~~~~i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~--~--~~~g   90 (291)
                      ++| +.+.+|+||.+.|+|++++.+||+. |||+...+....    ....+.  .+...+++  .......  .  ...|
T Consensus         2 ~np-~g~~Gidhv~fav~d~~~~~~~~~~-lGF~~~~~~~~~----~~~l~~--~G~i~ll~--~~~~~s~~~~~~~~hg   71 (150)
T d1cjxa1           2 ENP-MGLMGFEFIEFASPTPGTLEPIFEI-MGFTKVATHRSK----NVHLYR--QGEINLIL--NNEPNSIASYFAAEHG   71 (150)
T ss_dssp             CCT-TCEEEEEEEEEECSSTTSSHHHHHH-TTCEEEEEESSS----SEEEEE--ETTEEEEE--ECCSSSHHHHHHHHHS
T ss_pred             CCC-CccCCEEEEEEecCCHHHHHHHHHH-hCCEEEecccce----EEEEEe--cCcEEEEe--cCCCCCHhHhHHhhCC
Confidence            344 6799999999999999999999987 999998765432    233344  22333333  2221111  1  2377


Q ss_pred             CCceEEEEEECCHHHHHHHHHHcCCeeeeCCccCCCCceEEEEEECCCCcEEEEEecCCCCCC
Q 022831           91 TGFGHLAIATEDVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFELIQRGPTPEP  153 (291)
Q Consensus        91 ~~~~~i~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dP~G~~iel~~~~~~~~~  153 (291)
                      +|++||+|+|+|++++++++.++|+++...+..  .|...+..+++|+|.++.|+++.....+
T Consensus        72 ~gv~hiaf~V~D~~~a~~~a~~~Ga~~i~~~~~--~g~~~~~~i~g~gg~~i~Fv~~~~~~~~  132 (150)
T d1cjxa1          72 PSVCGMAFRVKDSQKAYNRALELGAQPIHIDTG--PMELNLPAIKGIGGAPLYLIDRFGEGSS  132 (150)
T ss_dssp             SEEEEEEEEESCHHHHHHHHHHTTCCBCCCCCC--TTCBCCCEEECGGGCEEEEECCCSSSCC
T ss_pred             CceEEEEEEeCCHHHHHHHHHHCCCEEcccCCC--CCceeeeEEEcCCCCEEEEECcCCCCCc
Confidence            899999999999999999999999997765432  2333357789999999999997654333

>d1xy7a_ d.32.1.9 (A:) Hypothetical protein At5g48480 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Hypothetical protein At5g48480
domain: Hypothetical protein At5g48480
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.49  E-value=1.1e-13  Score=101.55  Aligned_cols=118  Identities=15%  Similarity=0.146  Sum_probs=78.5

Q ss_pred             eEEEEeCCHHHHHHHHHHhcCCEEEEEeccCC-------CceeeEEeeccCCCcceEEEeeecC-CCCcccCCCCceEEE
Q 022831           26 HAVYRVGDLDRTIKYYTECFGMELLRKRDVPE-------EKYSNAFLGFGPEQSYFVVELTYNY-GVTSYDIGTGFGHLA   97 (291)
Q Consensus        26 hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~l~l~~~~-~~~~~~~g~~~~~i~   97 (291)
                      ++.+.++|++++.+||+++||+++..+...++       +......+.++.  ..+.+...... .......+....+|+
T Consensus        10 ~l~v~~~~~~eAi~FY~~~fG~~~~~~~~~~~~~~~~~~~~~~~a~l~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~l~   87 (135)
T d1xy7a_          10 MLLVEAQKVGDAVTFYKSAFGAIESGHSLYPKRKLDQELPHVLSSELNLAG--SSFVVCDVSSLPGFSTAKSEGSGVTFL   87 (135)
T ss_dssp             EEEECTTCHHHHHHHHHHHHCCEEC---------------CCCEEEEEETT--EEEEEEEGGGSTTCCCCCTTSCCCEEE
T ss_pred             EEEEECCCHHHHHHHHHHHhCCEEEEEEecCCccccccCCcEEEEEEEECC--eeeeccccccccccccCCCCCcceEEE
Confidence            45667779999999999999999876543222       222234444432  12222111111 111112222345899


Q ss_pred             EEECCHHHHHHHHHHcCCeeeeCCccCCCCceEEEEEECCCCcEEEEEe
Q 022831           98 IATEDVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFELIQ  146 (291)
Q Consensus        98 ~~v~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dP~G~~iel~~  146 (291)
                      +.|+|++++++++.++|+++..++...++|.+. ++++||+|+.|+|.|
T Consensus        88 ~~v~d~~~~~~~~~~~g~~~~~~~~~~~~g~~~-~~v~Dp~G~~W~i~e  135 (135)
T d1xy7a_          88 LGTKDAEAAVAKAVDAGAVKVEVTEAEVELGFK-GKVTDPFGVTWIFAE  135 (135)
T ss_dssp             EECSCHHHHHHHHHHTTCEECCCCHHHHHTTEE-EEEECTTSCEEEEEC
T ss_pred             EeecCcceeEEEeecccceEecCcccccccCEE-EEEECCCCCEEEEeC
Confidence            999999999999999999999999998888764 899999999999875

>d1jifa_ d.32.1.2 (A:) Bleomycin resistance protein, BRP {Streptomyces verticillus [TaxId: 29309]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Bleomycin resistance protein, BRP
species: Streptomyces verticillus [TaxId: 29309]

Probab=99.46  E-value=1.9e-13  Score=98.21  Aligned_cols=105  Identities=12%  Similarity=0.005  Sum_probs=73.1

Q ss_pred             eeeeCCchhhHHHHHHhcCCeeeeeccCcccceeeeeeccCCCCcceEEEEeEecCceeeccCceeeEEEEEecChHHHH
Q 022831          158 MLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAISTDDVYKSA  237 (291)
Q Consensus       158 ~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~~hia~~v~di~~~~  237 (291)
                      .|.|+|++++.+||+++|||++....+    .+.  ++..+    ...+.+......    ...+..++.+.+.|++.+.
T Consensus        10 vL~v~Dl~~s~~FY~~vLG~~~~~~~~----~~~--~~~~~----~~~l~l~~~~~~----~~~~~~~~~~~~~~i~~~~   75 (122)
T d1jifa_          10 VLTAVDVPANVSFWVDTLGFEKDFGDR----DFA--GVRRG----DIRLHISRTEHQ----IVADNTSAWIEVTDPDALH   75 (122)
T ss_dssp             EEEESSHHHHHHHHHHTTCCEEEEECS----SEE--EEEET----TEEEEEEECSCH----HHHTTCEEEEEESCHHHHH
T ss_pred             EEEcCCHHHHHHHHHhhhCCceEecCC----cee--Eeeee----eeeeeeeccccc----cccceeEEEEeechhHHHH
Confidence            489999999999999999999766432    122  23322    244555443221    1235578999999999999


Q ss_pred             HHHHHHHHhhCCeeeecccc-------cCCCCceEEEEECCCCCeEEEEec
Q 022831          238 EVVNLVTQELGGKITRQPGP-------IPGLNTKITSFVDPDGWKTVLVDN  281 (291)
Q Consensus       238 ~~l~~~~~~~G~~~~~~p~~-------~~~~~~~~~~~~DPdG~~iel~~~  281 (291)
                      +++    ++.+......+..       .+ .+++.+|++|||||+|||..-
T Consensus        76 ~~~----~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~DPdGn~ief~~~  121 (122)
T d1jifa_          76 EEW----ARAVSTDYADTSGPAMTPVGES-PAGREFAVRDPAGNCVHFTAG  121 (122)
T ss_dssp             HHH----HTTSCSCTTCTTSCEECCCEEE-TTEEEEEEECTTCCEEEEEEC
T ss_pred             HHH----HhhcceEEeeccccccCccccC-CCeEEEEEECCCCCEEEEEeC
Confidence            999    8887765433321       12 246889999999999999863

>d1xy7a_ d.32.1.9 (A:) Hypothetical protein At5g48480 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Hypothetical protein At5g48480
domain: Hypothetical protein At5g48480
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.45  E-value=2.5e-13  Score=99.50  Aligned_cols=115  Identities=13%  Similarity=0.138  Sum_probs=76.2

Q ss_pred             eeeeeCCchhhHHHHHHhcCCeeeeeccCccc-------ceeeeeeccCCCCcceEEEEeEec---CceeeccCceeeEE
Q 022831          157 VMLRVGDLGRSIKFYEKALGMKLLRTIDSPEL-------KCALAMLGYAEEDQTTVLELAYSY---GVTEYTKGNAYAQV  226 (291)
Q Consensus       157 v~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~l~l~~~~---~~~~~~~~~g~~hi  226 (291)
                      +.+.+.|++++.+||+++||+++..+...+++       ......+..+    ...+.+....   +..+.....+..++
T Consensus        11 l~v~~~~~~eAi~FY~~~fG~~~~~~~~~~~~~~~~~~~~~~~a~l~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~l   86 (135)
T d1xy7a_          11 LLVEAQKVGDAVTFYKSAFGAIESGHSLYPKRKLDQELPHVLSSELNLA----GSSFVVCDVSSLPGFSTAKSEGSGVTF   86 (135)
T ss_dssp             EEECTTCHHHHHHHHHHHHCCEEC---------------CCCEEEEEET----TEEEEEEEGGGSTTCCCCCTTSCCCEE
T ss_pred             EEEECCCHHHHHHHHHHHhCCEEEEEEecCCccccccCCcEEEEEEEEC----CeeeeccccccccccccCCCCCcceEE
Confidence            45666799999999999999998766432221       1111222222    1223332211   11111122334689


Q ss_pred             EEEecChHHHHHHHHHHHHhhCCeeeecccccCCCCceEEEEECCCCCeEEEEe
Q 022831          227 AISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVD  280 (291)
Q Consensus       227 a~~v~di~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iel~~  280 (291)
                      ++.|+|+++++.++    .++|+++..+|...++ +.++++|+||+|+.|+|.|
T Consensus        87 ~~~v~d~~~~~~~~----~~~g~~~~~~~~~~~~-g~~~~~v~Dp~G~~W~i~e  135 (135)
T d1xy7a_          87 LLGTKDAEAAVAKA----VDAGAVKVEVTEAEVE-LGFKGKVTDPFGVTWIFAE  135 (135)
T ss_dssp             EEECSCHHHHHHHH----HHTTCEECCCCHHHHH-TTEEEEEECTTSCEEEEEC
T ss_pred             EEeecCcceeEEEe----ecccceEecCcccccc-cCEEEEEECCCCCEEEEeC
Confidence            99999999999999    9999999999988877 5789999999999999976

>d1xrka_ d.32.1.2 (A:) Bleomycin resistance protein, BRP {Streptoalloteichus hindustanus [TaxId: 2017]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Bleomycin resistance protein, BRP
species: Streptoalloteichus hindustanus [TaxId: 2017]

Probab=99.45  E-value=4.5e-13  Score=95.79  Aligned_cols=109  Identities=14%  Similarity=0.080  Sum_probs=72.9

Q ss_pred             eeeeeCCchhhHHHHHHhcCCeeeeeccCcccceeeeeeccCCCCcceEEEEeEecCceeeccCceeeEEEEEecChHHH
Q 022831          157 VMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAISTDDVYKS  236 (291)
Q Consensus       157 v~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~~hia~~v~di~~~  236 (291)
                      ..|.|+|++++++||+++|||++..+.+.    +.  .+..+    ...+.+......    ...+..++.+.+.+++..
T Consensus         8 pvL~v~D~~~s~~FY~~~LG~~~~~~~~~----~~--~~~~~----~~~l~~~~~~~~----~~~~~~~~~~~~~~~~~~   73 (120)
T d1xrka_           8 PVLTARDVAEAVEFWTDRLGFSRVFVEDD----FA--GVVRD----DVTLFISAVQDQ----VVPDNTQAWVWVRGLDEL   73 (120)
T ss_dssp             EEEEESCHHHHHHHHHHTTCCEEEEECSS----EE--EEEET----TEEEEEEECSCT----TTGGGCEEEEEEECHHHH
T ss_pred             EEEEECCHHHHHHHHHHhhCCeEEEECCC----ee--EEecc----cceeeccccccc----cCCCCceEEEeeccHHHH
Confidence            45899999999999999999998776432    22  22222    233444332221    234557888999999988


Q ss_pred             HHHHHH----HHHhhCCeeeecccccCCCCceEEEEECCCCCeEEEEec
Q 022831          237 AEVVNL----VTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDN  281 (291)
Q Consensus       237 ~~~l~~----~~~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iel~~~  281 (291)
                      ...+..    .+...|.....+|...++  ++.+||+|||||+|||+..
T Consensus        74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--g~~~~~~DPdGn~ief~~e  120 (120)
T d1xrka_          74 YAEWSEVVSTNFRDASGPAMTEIVEQPW--GREFALRDPAGNCVHFVAE  120 (120)
T ss_dssp             HHHHTTTSBSCTTTCSSCEECCCEEETT--EEEEEEECTTCCEEEEEEC
T ss_pred             HHHHHHhhhHHhhhcccccccCceecCC--EEEEEEECCCCCEEEEEEC
Confidence            887721    112334445555665655  5789999999999999863

>d1jifa_ d.32.1.2 (A:) Bleomycin resistance protein, BRP {Streptomyces verticillus [TaxId: 29309]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Bleomycin resistance protein, BRP
species: Streptomyces verticillus [TaxId: 29309]

Probab=99.45  E-value=1.1e-12  Score=94.13  Aligned_cols=105  Identities=12%  Similarity=0.030  Sum_probs=72.0

Q ss_pred             EEEeCCHHHHHHHHHHhcCCEEEEEeccCCCceeeEEeeccCCCcceEEEeeecCCCCcccCCCCceEEEEEECCHHHHH
Q 022831           28 VYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHLAIATEDVYKMV  107 (291)
Q Consensus        28 ~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~g~~~~~i~~~v~d~~~~~  107 (291)
                      .|.|+|++++++||+++|||++......      .+++..+.  .  .+.+.......    .....++.+.+.|+++++
T Consensus        10 vL~v~Dl~~s~~FY~~vLG~~~~~~~~~------~~~~~~~~--~--~l~l~~~~~~~----~~~~~~~~~~~~~i~~~~   75 (122)
T d1jifa_          10 VLTAVDVPANVSFWVDTLGFEKDFGDRD------FAGVRRGD--I--RLHISRTEHQI----VADNTSAWIEVTDPDALH   75 (122)
T ss_dssp             EEEESSHHHHHHHHHHTTCCEEEEECSS------EEEEEETT--E--EEEEEECSCHH----HHTTCEEEEEESCHHHHH
T ss_pred             EEEcCCHHHHHHHHHhhhCCceEecCCc------eeEeeeee--e--eeeeecccccc----ccceeEEEEeechhHHHH
Confidence            4999999999999999999999765321      44555432  2  23333322111    113457899999999999


Q ss_pred             HHHHHcCCeeeeCCcc-------CCCCceEEEEEECCCCcEEEEEec
Q 022831          108 ENIRAKGGNVTREPGP-------LKGMTTHFAFVKDPDGYIFELIQR  147 (291)
Q Consensus       108 ~~l~~~G~~~~~~~~~-------~~~g~~~~~~~~dP~G~~iel~~~  147 (291)
                      +++.+++......+..       ..++.+ .+|++|||||+|+|...
T Consensus        76 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~-~~~~~DPdGn~ief~~~  121 (122)
T d1jifa_          76 EEWARAVSTDYADTSGPAMTPVGESPAGR-EFAVRDPAGNCVHFTAG  121 (122)
T ss_dssp             HHHHTTSCSCTTCTTSCEECCCEEETTEE-EEEEECTTCCEEEEEEC
T ss_pred             HHHHhhcceEEeeccccccCccccCCCeE-EEEEECCCCCEEEEEeC
Confidence            9999998775433211       123333 58999999999999764

>d1xrka_ d.32.1.2 (A:) Bleomycin resistance protein, BRP {Streptoalloteichus hindustanus [TaxId: 2017]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Bleomycin resistance protein, BRP
species: Streptoalloteichus hindustanus [TaxId: 2017]

Probab=99.34  E-value=1.4e-11  Score=87.71  Aligned_cols=105  Identities=10%  Similarity=0.019  Sum_probs=70.6

Q ss_pred             eEEEEeCCHHHHHHHHHHhcCCEEEEEeccCCCceeeEEeeccCCCcceEEEeeecCCCCcccCCCCceEEEEEECCHHH
Q 022831           26 HAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHLAIATEDVYK  105 (291)
Q Consensus        26 hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~g~~~~~i~~~v~d~~~  105 (291)
                      +..|.|+|++++++||+++|||++..+...      ..++..+.  ..  +.+......    ...+..++.+.+.+++.
T Consensus         7 ~pvL~v~D~~~s~~FY~~~LG~~~~~~~~~------~~~~~~~~--~~--l~~~~~~~~----~~~~~~~~~~~~~~~~~   72 (120)
T d1xrka_           7 VPVLTARDVAEAVEFWTDRLGFSRVFVEDD------FAGVVRDD--VT--LFISAVQDQ----VVPDNTQAWVWVRGLDE   72 (120)
T ss_dssp             EEEEEESCHHHHHHHHHHTTCCEEEEECSS------EEEEEETT--EE--EEEEECSCT----TTGGGCEEEEEEECHHH
T ss_pred             EEEEEECCHHHHHHHHHHhhCCeEEEECCC------eeEEeccc--ce--eeccccccc----cCCCCceEEEeeccHHH
Confidence            445899999999999999999999875332      34444332  22  323222211    11245678899999999


Q ss_pred             HHHHHHHcCCe--------eeeCCccCCCCceEEEEEECCCCcEEEEEe
Q 022831          106 MVENIRAKGGN--------VTREPGPLKGMTTHFAFVKDPDGYIFELIQ  146 (291)
Q Consensus       106 ~~~~l~~~G~~--------~~~~~~~~~~g~~~~~~~~dP~G~~iel~~  146 (291)
                      .++.+.+.+..        ...++...++| + .+|++|||||.|||+.
T Consensus        73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g-~-~~~~~DPdGn~ief~~  119 (120)
T d1xrka_          73 LYAEWSEVVSTNFRDASGPAMTEIVEQPWG-R-EFALRDPAGNCVHFVA  119 (120)
T ss_dssp             HHHHHTTTSBSCTTTCSSCEECCCEEETTE-E-EEEEECTTCCEEEEEE
T ss_pred             HHHHHHHhhhHHhhhcccccccCceecCCE-E-EEEEECCCCCEEEEEE
Confidence            88887766544        33344555554 3 5899999999999975

>d1cjxa1 d.32.1.3 (A:4-153) 4-hydroxyphenylpyruvate dioxygenase, HppD {Pseudomonas fluorescens [TaxId: 294]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Pseudomonas fluorescens [TaxId: 294]

Probab=99.32  E-value=5.3e-12  Score=93.67  Aligned_cols=119  Identities=14%  Similarity=0.069  Sum_probs=86.1

Q ss_pred             CCceeeeeeeCCchhhHHHHHHhcCCeeeeeccCcccceeeeeeccCCCCcceEEEEeEecCcee----eccCceeeEEE
Q 022831          152 EPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTE----YTKGNAYAQVA  227 (291)
Q Consensus       152 ~~~~hv~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~----~~~~~g~~hia  227 (291)
                      ..|+||.+.|+|++++.+||++ |||+...+.....    ...++.+    ...+.+........    ...++|++|+|
T Consensus         8 ~Gidhv~fav~d~~~~~~~~~~-lGF~~~~~~~~~~----~~l~~~G----~i~ll~~~~~~s~~~~~~~~hg~gv~hia   78 (150)
T d1cjxa1           8 MGFEFIEFASPTPGTLEPIFEI-MGFTKVATHRSKN----VHLYRQG----EINLILNNEPNSIASYFAAEHGPSVCGMA   78 (150)
T ss_dssp             EEEEEEEEECSSTTSSHHHHHH-TTCEEEEEESSSS----EEEEEET----TEEEEEECCSSSHHHHHHHHHSSEEEEEE
T ss_pred             CCEEEEEEecCCHHHHHHHHHH-hCCEEEecccceE----EEEEecC----cEEEEecCCCCCHhHhHHhhCCCceEEEE
Confidence            3589999999999999999976 9999887654322    2223322    23333322211111    22578999999


Q ss_pred             EEecChHHHHHHHHHHHHhhCCeeeecccccCCCCceEEEEECCCCCeEEEEechhhh
Q 022831          228 ISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNEDFL  285 (291)
Q Consensus       228 ~~v~di~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~~~~  285 (291)
                      |.|+|++++++++    .++|+++...|... + ...+..+++|+|.+|.|+++.+..
T Consensus        79 f~V~D~~~a~~~a----~~~Ga~~i~~~~~~-g-~~~~~~i~g~gg~~i~Fv~~~~~~  130 (150)
T d1cjxa1          79 FRVKDSQKAYNRA----LELGAQPIHIDTGP-M-ELNLPAIKGIGGAPLYLIDRFGEG  130 (150)
T ss_dssp             EEESCHHHHHHHH----HHTTCCBCCCCCCT-T-CBCCCEEECGGGCEEEEECCCSSS
T ss_pred             EEeCCHHHHHHHH----HHCCCEEcccCCCC-C-ceeeeEEEcCCCCEEEEECcCCCC
Confidence            9999999999999    99999988776532 2 345788999999999999987643

>d1cjxa2 d.32.1.3 (A:154-356) 4-hydroxyphenylpyruvate dioxygenase, HppD {Pseudomonas fluorescens [TaxId: 294]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Pseudomonas fluorescens [TaxId: 294]

Probab=99.30  E-value=8.4e-12  Score=97.11  Aligned_cols=101  Identities=16%  Similarity=0.163  Sum_probs=70.4

Q ss_pred             CccceeeEEEEeC--CHHHHHHHHHHhcCCEEEEEeccCCCceeeEEeeccCCCcceEEEeeecCCC-Cc-------ccC
Q 022831           20 DKRRLLHAVYRVG--DLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGV-TS-------YDI   89 (291)
Q Consensus        20 ~~~~i~hv~l~v~--d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~-~~-------~~~   89 (291)
                      .+++|+||++.|+  |++++..||+++|||+.....+.++....+....+........+.+..+... ..       ...
T Consensus         2 Gl~~IDHIa~~V~~~~l~~a~~FY~~vlGf~~~~~~di~~~~~~l~s~~~~~~~~~~~~~l~~~~~~~~sqi~~fl~~~~   81 (203)
T d1cjxa2           2 GLKVIDHLTHNVYRGRMVYWANFYEKLFNFREARYFDIKGEYTGLTSKAMSAPDGMIRIPLNEESSKGAGQIEEFLMQFN   81 (203)
T ss_dssp             SEEEEEEECEECCTTHHHHHHHHHHHHHCCEEEEEEEEECSSCEEEEEEEECTTSSCEEEEEEECTTCCSHHHHHHHHHT
T ss_pred             CCCeeCeeEeccChhhHHHHHHHHHHHhCCEEeEEEecCCCcceEEEEEeeccccccceecccCCCCCccHHHHHHHhcC
Confidence            3678999999998  9999999999999999987665444322222222222222333333322211 11       125


Q ss_pred             CCCceEEEEEECCHHHHHHHHHHcCCeeeeC
Q 022831           90 GTGFGHLAIATEDVYKMVENIRAKGGNVTRE  120 (291)
Q Consensus        90 g~~~~~i~~~v~d~~~~~~~l~~~G~~~~~~  120 (291)
                      |.|++||||.|+|+.+++++|+++|++....
T Consensus        82 g~GiqHIAf~vdDI~aav~~L~~~Gv~fL~~  112 (203)
T d1cjxa2          82 GEGIQHVAFLTDDLVKTWDALKKIGMRFMTA  112 (203)
T ss_dssp             SSBCCEEEEEESCHHHHHHHHHHTTCCBCCC
T ss_pred             CCCCceEEEEeCCHHHHHHHHHhcCCccccC
Confidence            6799999999999999999999999997654

>d1sqia2 d.32.1.3 (A:157-366) 4-hydroxyphenylpyruvate dioxygenase, HppD {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.24  E-value=3.3e-11  Score=93.76  Aligned_cols=104  Identities=17%  Similarity=0.256  Sum_probs=70.8

Q ss_pred             CcCCccceeeEEEEeCC--HHHHHHHHHHhcCCEEEEEecc-----CCCceeeEEeeccCCCcceEEEeeecCC--CCc-
Q 022831           17 PKKDKRRLLHAVYRVGD--LDRTIKYYTECFGMELLRKRDV-----PEEKYSNAFLGFGPEQSYFVVELTYNYG--VTS-   86 (291)
Q Consensus        17 ~~~~~~~i~hv~l~v~d--~~~~~~FY~~~lG~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~l~l~~~~~--~~~-   86 (291)
                      +...+.+|+||++.|++  ++++..||+++|||+.....+.     +.+......+....  ..+.+.+..+..  ... 
T Consensus        18 p~~gl~~IDHv~~~Vp~~~ld~av~fY~~vfGf~~~~~~~~~~i~~~~~~l~s~~l~s~~--~~i~~~lne~~~~~~~sq   95 (210)
T d1sqia2          18 PSCNLEIIDHIVGNQPDQEMESASEWYLKNLQFHRFWSVDDTQVHTEYSSLRSIVVANYE--ESIKMPINEPAPGRKKSQ   95 (210)
T ss_dssp             CCCCEEEEEEEEEECCTTCHHHHHHHHHHHHCCEEECCC-----------CEEEEEECTT--SCCEEEEEECC-----CH
T ss_pred             CCCCcceeCceEeccCchhHHHHHHHHHHHhCCEEEEEecccccCCceeEEEEEEEEecC--ccccccccccCCCCcccH
Confidence            34578999999999998  9999999999999987654221     11222333333222  333343333221  111 


Q ss_pred             ------ccCCCCceEEEEEECCHHHHHHHHHHcCCeeeeCCc
Q 022831           87 ------YDIGTGFGHLAIATEDVYKMVENIRAKGGNVTREPG  122 (291)
Q Consensus        87 ------~~~g~~~~~i~~~v~d~~~~~~~l~~~G~~~~~~~~  122 (291)
                            ...|.|++||||.|+|+.++.++|+++|++....|.
T Consensus        96 i~~fl~~~~G~GiQHIAf~t~DI~~av~~L~~~Gv~fL~~P~  137 (210)
T d1sqia2          96 IQEYVDYNGGAGVQHIALRTEDIITTIRHLRERGMEFLAVPS  137 (210)
T ss_dssp             HHHHHHHHTSSEEEEEEEEESCHHHHHHHHHHHTCCBCCCCH
T ss_pred             HHHHHhhcCCCCeeEEEEEcCCHHHHHHHHHHcCCCCCCCCc
Confidence                  135789999999999999999999999999887663

>d1cjxa2 d.32.1.3 (A:154-356) 4-hydroxyphenylpyruvate dioxygenase, HppD {Pseudomonas fluorescens [TaxId: 294]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Pseudomonas fluorescens [TaxId: 294]

Probab=99.18  E-value=3e-11  Score=93.92  Aligned_cols=98  Identities=18%  Similarity=0.200  Sum_probs=69.3

Q ss_pred             CceeeeeeeC--CchhhHHHHHHhcCCeeeeeccCccc--ceeeeeeccCCCCcceEEEEeEecCce-e-------eccC
Q 022831          153 PLCQVMLRVG--DLGRSIKFYEKALGMKLLRTIDSPEL--KCALAMLGYAEEDQTTVLELAYSYGVT-E-------YTKG  220 (291)
Q Consensus       153 ~~~hv~l~v~--D~~~~~~Fy~~~lG~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~l~~~~~~~-~-------~~~~  220 (291)
                      +|+||++.|+  |++++..||+++|||++....+.++.  ......+..+  .....+.+....... +       ...+
T Consensus         5 ~IDHIa~~V~~~~l~~a~~FY~~vlGf~~~~~~di~~~~~~l~s~~~~~~--~~~~~~~l~~~~~~~~sqi~~fl~~~~g   82 (203)
T d1cjxa2           5 VIDHLTHNVYRGRMVYWANFYEKLFNFREARYFDIKGEYTGLTSKAMSAP--DGMIRIPLNEESSKGAGQIEEFLMQFNG   82 (203)
T ss_dssp             EEEEECEECCTTHHHHHHHHHHHHHCCEEEEEEEEECSSCEEEEEEEECT--TSSCEEEEEEECTTCCSHHHHHHHHHTS
T ss_pred             eeCeeEeccChhhHHHHHHHHHHHhCCEEeEEEecCCCcceEEEEEeecc--ccccceecccCCCCCccHHHHHHHhcCC
Confidence            5899999998  89999999999999998876543332  2222222322  223444443332221 1       2356


Q ss_pred             ceeeEEEEEecChHHHHHHHHHHHHhhCCeeeeccc
Q 022831          221 NAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPG  256 (291)
Q Consensus       221 ~g~~hia~~v~di~~~~~~l~~~~~~~G~~~~~~p~  256 (291)
                      .|++||||.|+||.++++.|    +++|+++...|.
T Consensus        83 ~GiqHIAf~vdDI~aav~~L----~~~Gv~fL~~pp  114 (203)
T d1cjxa2          83 EGIQHVAFLTDDLVKTWDAL----KKIGMRFMTAPP  114 (203)
T ss_dssp             SBCCEEEEEESCHHHHHHHH----HHTTCCBCCCCC
T ss_pred             CCCceEEEEeCCHHHHHHHH----HhcCCccccCch
Confidence            79999999999999999999    999999988663

>d1sp8a2 d.32.1.3 (A:208-431) 4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Zea mays) [TaxId: 4577]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Corn (Zea mays) [TaxId: 4577]

Probab=99.16  E-value=1.2e-10  Score=91.77  Aligned_cols=97  Identities=20%  Similarity=0.274  Sum_probs=66.5

Q ss_pred             cCCccceeeEEEEeCCHHHHHHHHHHhcCCEEEEEeccC-----CCceeeEEeeccCCCcceEEEeeecC---CCCc---
Q 022831           18 KKDKRRLLHAVYRVGDLDRTIKYYTECFGMELLRKRDVP-----EEKYSNAFLGFGPEQSYFVVELTYNY---GVTS---   86 (291)
Q Consensus        18 ~~~~~~i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~l~l~~~~---~~~~---   86 (291)
                      ...+++|+||++.|+|++++..||+++|||+...+....     ........+..+  ...+.+.+....   ....   
T Consensus         4 d~Gl~~IDHI~i~V~dld~a~~fY~~vLGf~~~~~~~~~~i~~~~~~l~s~v~~~~--~g~v~~~l~E~~~~~~~~s~i~   81 (224)
T d1sp8a2           4 DYGLSRFDHIVGNVPELAPAAAYFAGFTGFHEFAEFTTEDVGTAESGLNSMVLANN--SENVLLPLNEPVHGTKRRSQIQ   81 (224)
T ss_dssp             CCSEEEEEEEEEECSCHHHHHHHHHHHHCCEEEEEEEC--------CEEEEEEECS--SSCCEEEEEEECCCSSSCCHHH
T ss_pred             CCCcCeeeeeEEeccCHHHHHHHHHHHhCCEEEEEeccccccccceeEEEEEEEcC--CCccceeeeeecCCCCCccHHH
Confidence            357899999999999999999999999999987654322     223333333322  223334444321   1111   


Q ss_pred             ----ccCCCCceEEEEEECCHHHHHHHHHHcCCe
Q 022831           87 ----YDIGTGFGHLAIATEDVYKMVENIRAKGGN  116 (291)
Q Consensus        87 ----~~~g~~~~~i~~~v~d~~~~~~~l~~~G~~  116 (291)
                          ...|.|++||||.|+|+.+++++|+++|+.
T Consensus        82 ~FL~~~~g~GiqHIAf~vdDI~~av~~L~arGv~  115 (224)
T d1sp8a2          82 TFLDHHGGPGVQHMALASDDVLRTLREMQARSAM  115 (224)
T ss_dssp             HHHHHHTSSEEEEEEEEETTHHHHHHHHHTSGGG
T ss_pred             HHHHhccCCCceeEEEEeCCHHHHHHHHHhcccc
Confidence                124679999999999999999999998754

>d1t47a2 d.32.1.3 (A:179-377) 4-hydroxyphenylpyruvate dioxygenase, HppD {Streptomyces avermitilis [TaxId: 33903]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Streptomyces avermitilis [TaxId: 33903]

Probab=99.15  E-value=2.8e-10  Score=87.70  Aligned_cols=98  Identities=11%  Similarity=0.241  Sum_probs=69.2

Q ss_pred             CCceeeeeeeC--CchhhHHHHHHhcCCeeeeeccCcc-----cceeeeeeccCCCCcceEEEEeEec--Ccee------
Q 022831          152 EPLCQVMLRVG--DLGRSIKFYEKALGMKLLRTIDSPE-----LKCALAMLGYAEEDQTTVLELAYSY--GVTE------  216 (291)
Q Consensus       152 ~~~~hv~l~v~--D~~~~~~Fy~~~lG~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~l~l~~~~--~~~~------  216 (291)
                      ..|+|+++.|+  +++++..||+++|||++......++     .......+..+  +....+.+..+.  ...+      
T Consensus         5 ~~IDHia~avp~~~l~~av~fY~~vfGf~~~~~~~~~di~~~~~~l~s~~~~s~--~~~v~l~lne~~~~~~~s~i~~FL   82 (199)
T d1t47a2           5 QAIDHCVGNVELGRMNEWVGFYNKVMGFTNMKEFVGDDIATEYSALMSKVVADG--TLKVKFPINEPALAKKKSQIDEYL   82 (199)
T ss_dssp             CEEEEEEEECCTTCHHHHHHHHHHHHCCEECSCCBCHHHHTTTTSEEEEEEECT--TSCSEEEEEEECCSSSCCHHHHHH
T ss_pred             eeeCceEeccChhhHHHHHHHHHHHhCCeEeeEecccccccceeEEEEeecccc--ccccceeecccCccccccchhhhh
Confidence            35899999998  9999999999999999776543221     22222223322  223444443322  1111      


Q ss_pred             -eccCceeeEEEEEecChHHHHHHHHHHHHhhCCeeeecc
Q 022831          217 -YTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQP  255 (291)
Q Consensus       217 -~~~~~g~~hia~~v~di~~~~~~l~~~~~~~G~~~~~~p  255 (291)
                       ...|+|++||||.|+||.++++.+    +++|+++...|
T Consensus        83 ~~~~g~GiQHIAl~tdDI~~av~~L----~~~G~~fL~~p  118 (199)
T d1t47a2          83 EFYGGAGVQHIALNTGDIVETVRTM----RAAGVQFLDTP  118 (199)
T ss_dssp             HHHTSCEEEEEEEECSCHHHHHHHH----HHTTCCBCCCC
T ss_pred             hhcCCCcceEEEEEcCCHHHHHHHH----HHcCCCCCCCC
Confidence             235679999999999999999999    99999999888

>d1t47a2 d.32.1.3 (A:179-377) 4-hydroxyphenylpyruvate dioxygenase, HppD {Streptomyces avermitilis [TaxId: 33903]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Streptomyces avermitilis [TaxId: 33903]

Probab=99.13  E-value=1.4e-10  Score=89.42  Aligned_cols=104  Identities=16%  Similarity=0.231  Sum_probs=72.0

Q ss_pred             CCccceeeEEEEeC--CHHHHHHHHHHhcCCEEEEEecc-----CCCceeeEEeeccCCCcceEEEeeecCC--CCc---
Q 022831           19 KDKRRLLHAVYRVG--DLDRTIKYYTECFGMELLRKRDV-----PEEKYSNAFLGFGPEQSYFVVELTYNYG--VTS---   86 (291)
Q Consensus        19 ~~~~~i~hv~l~v~--d~~~~~~FY~~~lG~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~l~l~~~~~--~~~---   86 (291)
                      .+..+|+||++.|+  +++++..||+++|||+.......     +........+.  +....+.+.+..+..  ...   
T Consensus         2 ~~f~~IDHia~avp~~~l~~av~fY~~vfGf~~~~~~~~~di~~~~~~l~s~~~~--s~~~~v~l~lne~~~~~~~s~i~   79 (199)
T d1t47a2           2 RTFQAIDHCVGNVELGRMNEWVGFYNKVMGFTNMKEFVGDDIATEYSALMSKVVA--DGTLKVKFPINEPALAKKKSQID   79 (199)
T ss_dssp             CSCCEEEEEEEECCTTCHHHHHHHHHHHHCCEECSCCBCHHHHTTTTSEEEEEEE--CTTSCSEEEEEEECCSSSCCHHH
T ss_pred             CcceeeCceEeccChhhHHHHHHHHHHHhCCeEeeEecccccccceeEEEEeecc--ccccccceeecccCccccccchh
Confidence            46789999999999  99999999999999998654322     12222222232  223333443332221  111   


Q ss_pred             ----ccCCCCceEEEEEECCHHHHHHHHHHcCCeeeeCCccC
Q 022831           87 ----YDIGTGFGHLAIATEDVYKMVENIRAKGGNVTREPGPL  124 (291)
Q Consensus        87 ----~~~g~~~~~i~~~v~d~~~~~~~l~~~G~~~~~~~~~~  124 (291)
                          ...|.|++||||.|+|+.++.++|+++|++....|...
T Consensus        80 ~FL~~~~g~GiQHIAl~tdDI~~av~~L~~~G~~fL~~p~~Y  121 (199)
T d1t47a2          80 EYLEFYGGAGVQHIALNTGDIVETVRTMRAAGVQFLDTPDSY  121 (199)
T ss_dssp             HHHHHHTSCEEEEEEEECSCHHHHHHHHHHTTCCBCCCCGGG
T ss_pred             hhhhhcCCCcceEEEEEcCCHHHHHHHHHHcCCCCCCCChHH
Confidence                13567999999999999999999999999988766443

>d1u6la_ d.32.1.7 (A:) Hypothetical protein PA1353 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: 3-demethylubiquinone-9 3-methyltransferase
domain: Hypothetical protein PA1353
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.10  E-value=9.4e-10  Score=80.18  Aligned_cols=114  Identities=17%  Similarity=0.125  Sum_probs=70.6

Q ss_pred             eeeC-CchhhHHHHHHhcCCeeeeeccCccc------------ceeeeeeccCCCCcceEEEEeEecCceeeccCceeeE
Q 022831          159 LRVG-DLGRSIKFYEKALGMKLLRTIDSPEL------------KCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQ  225 (291)
Q Consensus       159 l~v~-D~~~~~~Fy~~~lG~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~~h  225 (291)
                      |..+ |.+++.+||+++||+++.......+.            ......+..+    ...+.........+.. ..+-.+
T Consensus         8 l~f~g~a~eAl~FY~~~fG~e~~~~~~~~~~~~~~~~~~~~~~~i~ha~l~i~----g~~~~~~d~~~~~~~~-~~~~~~   82 (137)
T d1u6la_           8 LIFNGNCREAFSCYHQHLGGTLEAMLPFGDSPECGDIPADWKDKIMHARLVVG----SFALMASDNHPAYPYE-GIKGCS   82 (137)
T ss_dssp             EEESSCHHHHHHHHHHHHCSEEEEEEESTTTTC----CCSSCCCEEEEEEEET----TEEEEEEECCTTSCCC-CCCSEE
T ss_pred             EEECCCHHHHHHHHHHHCCCEEEEEEEcccCCccccCCCCCCCeEEEEEEEEc----CeEEEecccCCccccc-CCCcEE
Confidence            3444 89999999999999998765432211            0111111111    1122222211111111 234467


Q ss_pred             EEEEecChHH--HHHHHHHHHHhhCCeeeecccccCCCCceEEEEECCCCCeEEEEech
Q 022831          226 VAISTDDVYK--SAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNE  282 (291)
Q Consensus       226 ia~~v~di~~--~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~  282 (291)
                      +++.+++.+.  .+.+.    .+.|+++..+|...++ |.++++|+||+|+.|+|...+
T Consensus        83 ~~l~~~~~d~~~~~~~~----l~~G~~v~~p~~~~~w-G~~~g~v~Dp~G~~W~i~~~~  136 (137)
T d1u6la_          83 ISLNVDSKAEAERLFNA----LAEGGSVQMPLGPTFW-AASFGMFTDRFGVAWMVNCEQ  136 (137)
T ss_dssp             EEEECSSHHHHHHHHHH----HHTTSEEEEEEEEETT-EEEEEEEECTTSCEEEEEESC
T ss_pred             EEEEcCCHHHHHHHHhh----cccCceeecCccccCC-CcEEEEEECCCCCEEEEEecC
Confidence            8888776443  34444    6789999999999887 568999999999999998754

>d1sqia2 d.32.1.3 (A:157-366) 4-hydroxyphenylpyruvate dioxygenase, HppD {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.06  E-value=3.4e-10  Score=87.94  Aligned_cols=98  Identities=14%  Similarity=0.228  Sum_probs=68.0

Q ss_pred             CceeeeeeeCC--chhhHHHHHHhcCCeeeeeccCc-----ccceeeeeeccCCCCcceEEEEeEecCc--ee-------
Q 022831          153 PLCQVMLRVGD--LGRSIKFYEKALGMKLLRTIDSP-----ELKCALAMLGYAEEDQTTVLELAYSYGV--TE-------  216 (291)
Q Consensus       153 ~~~hv~l~v~D--~~~~~~Fy~~~lG~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~l~l~~~~~~--~~-------  216 (291)
                      .|+||++.|++  ++++.+||+++|||+.....+..     ........+..++  ....+.+..+...  .+       
T Consensus        24 ~IDHv~~~Vp~~~ld~av~fY~~vfGf~~~~~~~~~~i~~~~~~l~s~~l~s~~--~~i~~~lne~~~~~~~sqi~~fl~  101 (210)
T d1sqia2          24 IIDHIVGNQPDQEMESASEWYLKNLQFHRFWSVDDTQVHTEYSSLRSIVVANYE--ESIKMPINEPAPGRKKSQIQEYVD  101 (210)
T ss_dssp             EEEEEEEECCTTCHHHHHHHHHHHHCCEEECCC-----------CEEEEEECTT--SCCEEEEEECC-----CHHHHHHH
T ss_pred             eeCceEeccCchhHHHHHHHHHHHhCCEEEEEecccccCCceeEEEEEEEEecC--ccccccccccCCCCcccHHHHHHh
Confidence            49999999997  99999999999999976653321     1222333344332  2344444443221  11       


Q ss_pred             eccCceeeEEEEEecChHHHHHHHHHHHHhhCCeeeeccc
Q 022831          217 YTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPG  256 (291)
Q Consensus       217 ~~~~~g~~hia~~v~di~~~~~~l~~~~~~~G~~~~~~p~  256 (291)
                      ...|.|++||||.|+||.+++++|    +++|+++...|.
T Consensus       102 ~~~G~GiQHIAf~t~DI~~av~~L----~~~Gv~fL~~P~  137 (210)
T d1sqia2         102 YNGGAGVQHIALRTEDIITTIRHL----RERGMEFLAVPS  137 (210)
T ss_dssp             HHTSSEEEEEEEEESCHHHHHHHH----HHHTCCBCCCCH
T ss_pred             hcCCCCeeEEEEEcCCHHHHHHHH----HHcCCCCCCCCc
Confidence            235789999999999999999999    999999998883

>d1u6la_ d.32.1.7 (A:) Hypothetical protein PA1353 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: 3-demethylubiquinone-9 3-methyltransferase
domain: Hypothetical protein PA1353
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.03  E-value=7.2e-09  Score=75.30  Aligned_cols=111  Identities=19%  Similarity=0.199  Sum_probs=72.6

Q ss_pred             CCHHHHHHHHHHhcCCEEEEEeccCCC------------ceeeEEeeccCCCcceEEEeeecCCCCcccCCCCceEEEEE
Q 022831           32 GDLDRTIKYYTECFGMELLRKRDVPEE------------KYSNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHLAIA   99 (291)
Q Consensus        32 ~d~~~~~~FY~~~lG~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~g~~~~~i~~~   99 (291)
                      .|.+++.+||+++||+++.......+.            ...++.+.++.  ..  +............ ..+..++++.
T Consensus        12 g~a~eAl~FY~~~fG~e~~~~~~~~~~~~~~~~~~~~~~~i~ha~l~i~g--~~--~~~~d~~~~~~~~-~~~~~~~~l~   86 (137)
T d1u6la_          12 GNCREAFSCYHQHLGGTLEAMLPFGDSPECGDIPADWKDKIMHARLVVGS--FA--LMASDNHPAYPYE-GIKGCSISLN   86 (137)
T ss_dssp             SCHHHHHHHHHHHHCSEEEEEEESTTTTC----CCSSCCCEEEEEEEETT--EE--EEEEECCTTSCCC-CCCSEEEEEE
T ss_pred             CCHHHHHHHHHHHCCCEEEEEEEcccCCccccCCCCCCCeEEEEEEEEcC--eE--EEecccCCccccc-CCCcEEEEEE
Confidence            499999999999999999765433221            11222333321  11  1111111111222 2244678888


Q ss_pred             ECCHH--HHHHHHHHcCCeeeeCCccCCCCceEEEEEECCCCcEEEEEecC
Q 022831          100 TEDVY--KMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFELIQRG  148 (291)
Q Consensus       100 v~d~~--~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dP~G~~iel~~~~  148 (291)
                      +++.+  +.+.+..++|+++..++.+.++|.+ +++|+||+|+.|.|....
T Consensus        87 ~~~~d~~~~~~~~l~~G~~v~~p~~~~~wG~~-~g~v~Dp~G~~W~i~~~~  136 (137)
T d1u6la_          87 VDSKAEAERLFNALAEGGSVQMPLGPTFWAAS-FGMFTDRFGVAWMVNCEQ  136 (137)
T ss_dssp             CSSHHHHHHHHHHHHTTSEEEEEEEEETTEEE-EEEEECTTSCEEEEEESC
T ss_pred             cCCHHHHHHHHhhcccCceeecCccccCCCcE-EEEEECCCCCEEEEEecC
Confidence            87655  4477778899999999999999876 488999999999987643

>d1sp8a2 d.32.1.3 (A:208-431) 4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Zea mays) [TaxId: 4577]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Corn (Zea mays) [TaxId: 4577]

Probab=98.99  E-value=1.1e-09  Score=86.09  Aligned_cols=102  Identities=14%  Similarity=0.193  Sum_probs=66.0

Q ss_pred             CCceeeeeeeCCchhhHHHHHHhcCCeeeeeccC-----cccceeeeeeccCCCCcceEEEEeEec---Ccee-------
Q 022831          152 EPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDS-----PELKCALAMLGYAEEDQTTVLELAYSY---GVTE-------  216 (291)
Q Consensus       152 ~~~~hv~l~v~D~~~~~~Fy~~~lG~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~l~l~~~~---~~~~-------  216 (291)
                      .+|+||++.|+|++++..||+++|||........     +........+..++  ....+.+....   ...+       
T Consensus         8 ~~IDHI~i~V~dld~a~~fY~~vLGf~~~~~~~~~~i~~~~~~l~s~v~~~~~--g~v~~~l~E~~~~~~~~s~i~~FL~   85 (224)
T d1sp8a2           8 SRFDHIVGNVPELAPAAAYFAGFTGFHEFAEFTTEDVGTAESGLNSMVLANNS--ENVLLPLNEPVHGTKRRSQIQTFLD   85 (224)
T ss_dssp             EEEEEEEEECSCHHHHHHHHHHHHCCEEEEEEEC--------CEEEEEEECSS--SCCEEEEEEECCCSSSCCHHHHHHH
T ss_pred             CeeeeeEEeccCHHHHHHHHHHHhCCEEEEEeccccccccceeEEEEEEEcCC--CccceeeeeecCCCCCccHHHHHHH
Confidence            4689999999999999999999999997665322     22223333444332  23444554321   1111       


Q ss_pred             eccCceeeEEEEEecChHHHHHHHHHHHHhhCCeeeecc
Q 022831          217 YTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQP  255 (291)
Q Consensus       217 ~~~~~g~~hia~~v~di~~~~~~l~~~~~~~G~~~~~~p  255 (291)
                      ...+.|++||||.|+||.++++.|..+-.++|+++...|
T Consensus        86 ~~~g~GiqHIAf~vdDI~~av~~L~arGv~~G~~fl~~p  124 (224)
T d1sp8a2          86 HHGGPGVQHMALASDDVLRTLREMQARSAMGGFEFMAPP  124 (224)
T ss_dssp             HHTSSEEEEEEEEETTHHHHHHHHHTSGGGTSCCBCCCC
T ss_pred             hccCCCceeEEEEeCCHHHHHHHHHhccccccceecccc
Confidence            124679999999999999999999222223456666655

>d1sqda2 d.32.1.3 (A:181-410) 4-hydroxyphenylpyruvate dioxygenase, HppD {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=98.92  E-value=3.5e-09  Score=83.37  Aligned_cols=96  Identities=22%  Similarity=0.360  Sum_probs=66.0

Q ss_pred             CCccceeeEEEEeCCHHHHHHHHHHhcCCEEEEEeccCC-----CceeeEEeeccCCCcceEEEeeecCCC---Cc----
Q 022831           19 KDKRRLLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPE-----EKYSNAFLGFGPEQSYFVVELTYNYGV---TS----   86 (291)
Q Consensus        19 ~~~~~i~hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~l~l~~~~~~---~~----   86 (291)
                      ..+.+|+||++.|+|++++.+||+.+||+.........+     .......+.  .....+.+.+......   ..    
T Consensus        18 ~gl~~IDHI~iaVpdld~a~~~y~~~lG~~~~~~~~~~di~~~~~~l~s~v~~--s~~g~v~~~l~E~~~~~~~~sqi~~   95 (230)
T d1sqda2          18 YGIRRLDHAVGNVPELGPALTYVAGFTGFHQFAEFTADDVGTAESGLNSAVLA--SNDEMVLLPINEPVHGTKRKSQIQT   95 (230)
T ss_dssp             SSEEEEEEEEEECSCHHHHHHHHHHHHCCEEEEEEC--------CCEEEEEEE--CTTSCSEEEEEEECCC---CCHHHH
T ss_pred             CCcCccCcceecccCHHHHHHHHHHHcCCeeeEEecccccccceeeEeecccc--CCCcccceeEEeecCCCCCcchHHH
Confidence            458999999999999999999999999999877654222     111222222  2223444444432211   11    


Q ss_pred             ---ccCCCCceEEEEEECCHHHHHHHHHHcCCe
Q 022831           87 ---YDIGTGFGHLAIATEDVYKMVENIRAKGGN  116 (291)
Q Consensus        87 ---~~~g~~~~~i~~~v~d~~~~~~~l~~~G~~  116 (291)
                         ...|.|++||||.|+|+.+++++|+++|..
T Consensus        96 FL~~~~G~GiQHIAf~tdDI~aav~~LrarG~~  128 (230)
T d1sqda2          96 YLEHNEGAGLQHLALMSEDIFRTLREMRKRSSI  128 (230)
T ss_dssp             HHHHHTSCEEEEEEEEESCHHHHHHHHHHHGGG
T ss_pred             HHhhccCCceeEEEEEeCCHHHHHHHHHHhhcc
Confidence               236789999999999999999999998654

>d1u7ia_ d.32.1.7 (A:) Hypothetical protein PA1358 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: 3-demethylubiquinone-9 3-methyltransferase
domain: Hypothetical protein PA1358
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=98.79  E-value=2.7e-07  Score=66.36  Aligned_cols=115  Identities=14%  Similarity=0.179  Sum_probs=74.6

Q ss_pred             eEEEEeCCHHHHHHHHHHhcCCEEEEEec-------cCCCceeeEEeeccCCCcceEEEeeecCCCCcccCCCCceEEEE
Q 022831           26 HAVYRVGDLDRTIKYYTECFGMELLRKRD-------VPEEKYSNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHLAI   98 (291)
Q Consensus        26 hv~l~v~d~~~~~~FY~~~lG~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~g~~~~~i~~   98 (291)
                      ++.+.-+|.+++.+||+++||.+.+.+..       .+.+...++-|.++  +..+.+  ...........+ ....+++
T Consensus         9 yL~f~g~~a~eAi~FY~~~Fg~~~v~~~~~~~~~~~~~~g~v~ha~l~i~--~~~i~~--~d~~~~~~~~~~-~~~s~~l   83 (134)
T d1u7ia_           9 FLMFQGVQAEAAMNFYLSLFDDAEILQIQRYGAEGPGPEGSVLKALFRLG--DQSVHC--IDSHVRHAFDFT-PAFSFFV   83 (134)
T ss_dssp             EEEEESSCHHHHHHHHHHHCSSEEEEEEEECCTTCSSCTTSEEEEEEEET--TEEEEE--EEESSCCSCCCC-TTEEEEE
T ss_pred             EEEECCcCHHHHHHHHHHhCCCeEEEEEEEcCCCCCCCCCCEEEEEEEEC--CEEEEE--ecCCCCCCCCCC-CceEEEE
Confidence            45555679999999999999987654321       22344445556654  223322  222222222222 3356788


Q ss_pred             EECCHHHH--HHHHHHcCCeeeeCCccCCCCceEEEEEECCCCcEEEEEe
Q 022831           99 ATEDVYKM--VENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFELIQ  146 (291)
Q Consensus        99 ~v~d~~~~--~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dP~G~~iel~~  146 (291)
                      .+++.++.  +.+..+.|+++..++.+.++|.+ +..++||.|+.|.|.-
T Consensus        84 ~~~~~d~~~~~~~~l~~gg~v~~p~~~~~~g~~-~g~v~D~fGv~W~i~~  132 (134)
T d1u7ia_          84 DCESNAQIERLAEALSDGGKALMPLGDYGFSQR-FAWLADRFGVSWQLNL  132 (134)
T ss_dssp             ECCCHHHHHHHHHHHHTTSEEEEEEECCSSSSE-EEEEECTTSCEEEEEE
T ss_pred             EeccHHHHHHHHHHHhcCCEEecCcccccccce-EEEEECCCCCEEEEEc
Confidence            88775443  55556778999999999999876 4889999999999864

>d1u7ia_ d.32.1.7 (A:) Hypothetical protein PA1358 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: 3-demethylubiquinone-9 3-methyltransferase
domain: Hypothetical protein PA1358
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=98.76  E-value=1.9e-07  Score=67.23  Aligned_cols=114  Identities=12%  Similarity=0.038  Sum_probs=66.9

Q ss_pred             eeeCCchhhHHHHHHhcCCeeeeecc-------CcccceeeeeeccCCCCcceEEEEeEecCceeeccCceeeEEEEEec
Q 022831          159 LRVGDLGRSIKFYEKALGMKLLRTID-------SPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAISTD  231 (291)
Q Consensus       159 l~v~D~~~~~~Fy~~~lG~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~~hia~~v~  231 (291)
                      +.-++.+++.+||+++||........       .+.+......+..+    ...+-+...........+ +...+.+.++
T Consensus        12 f~g~~a~eAi~FY~~~Fg~~~v~~~~~~~~~~~~~~g~v~ha~l~i~----~~~i~~~d~~~~~~~~~~-~~~s~~l~~~   86 (134)
T d1u7ia_          12 FQGVQAEAAMNFYLSLFDDAEILQIQRYGAEGPGPEGSVLKALFRLG----DQSVHCIDSHVRHAFDFT-PAFSFFVDCE   86 (134)
T ss_dssp             EESSCHHHHHHHHHHHCSSEEEEEEEECCTTCSSCTTSEEEEEEEET----TEEEEEEEESSCCSCCCC-TTEEEEEECC
T ss_pred             ECCcCHHHHHHHHHHhCCCeEEEEEEEcCCCCCCCCCCEEEEEEEEC----CEEEEEecCCCCCCCCCC-CceEEEEEec
Confidence            33358899999999999987544321       11222222223322    233333332222112222 2345777777


Q ss_pred             ChHHHHHHHHHHHHhhCCeeeecccccCCCCceEEEEECCCCCeEEEEe
Q 022831          232 DVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVD  280 (291)
Q Consensus       232 di~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iel~~  280 (291)
                      +.+...+.. .. .+.|+++..++...++ +.++..++||.|+.|.|.-
T Consensus        87 ~~d~~~~~~-~~-l~~gg~v~~p~~~~~~-g~~~g~v~D~fGv~W~i~~  132 (134)
T d1u7ia_          87 SNAQIERLA-EA-LSDGGKALMPLGDYGF-SQRFAWLADRFGVSWQLNL  132 (134)
T ss_dssp             CHHHHHHHH-HH-HHTTSEEEEEEECCSS-SSEEEEEECTTSCEEEEEE
T ss_pred             cHHHHHHHH-HH-HhcCCEEecCcccccc-cceEEEEECCCCCEEEEEc
Confidence            644432222 11 5678999999998876 5789999999999999863

>d1sqda2 d.32.1.3 (A:181-410) 4-hydroxyphenylpyruvate dioxygenase, HppD {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=98.67  E-value=5.6e-08  Score=76.34  Aligned_cols=95  Identities=14%  Similarity=0.248  Sum_probs=63.4

Q ss_pred             CCceeeeeeeCCchhhHHHHHHhcCCeeeeeccCcc-----cceeeeeeccCCCCcceEEEEeEecCc---ee-------
Q 022831          152 EPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPE-----LKCALAMLGYAEEDQTTVLELAYSYGV---TE-------  216 (291)
Q Consensus       152 ~~~~hv~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~l~l~~~~~~---~~-------  216 (291)
                      .+|+||++.|+|++++.+||.++||+.........+     .......+..+  +....+.+......   .+       
T Consensus        21 ~~IDHI~iaVpdld~a~~~y~~~lG~~~~~~~~~~di~~~~~~l~s~v~~s~--~g~v~~~l~E~~~~~~~~sqi~~FL~   98 (230)
T d1sqda2          21 RRLDHAVGNVPELGPALTYVAGFTGFHQFAEFTADDVGTAESGLNSAVLASN--DEMVLLPINEPVHGTKRKSQIQTYLE   98 (230)
T ss_dssp             EEEEEEEEECSCHHHHHHHHHHHHCCEEEEEEC--------CCEEEEEEECT--TSCSEEEEEEECCC---CCHHHHHHH
T ss_pred             CccCcceecccCHHHHHHHHHHHcCCeeeEEecccccccceeeEeeccccCC--CcccceeEEeecCCCCCcchHHHHHh
Confidence            459999999999999999999999998776643221     11222223322  23344555443211   11       


Q ss_pred             eccCceeeEEEEEecChHHHHHHHHHHHHhh----CCeee
Q 022831          217 YTKGNAYAQVAISTDDVYKSAEVVNLVTQEL----GGKIT  252 (291)
Q Consensus       217 ~~~~~g~~hia~~v~di~~~~~~l~~~~~~~----G~~~~  252 (291)
                      ...|.|++||||.|+||.++++.|    ++.    |+++.
T Consensus        99 ~~~G~GiQHIAf~tdDI~aav~~L----rarG~~~G~~f~  134 (230)
T d1sqda2          99 HNEGAGLQHLALMSEDIFRTLREM----RKRSSIGGFDFM  134 (230)
T ss_dssp             HHTSCEEEEEEEEESCHHHHHHHH----HHHGGGTSCCBC
T ss_pred             hccCCceeEEEEEeCCHHHHHHHH----HHhhcccCcccc
Confidence            235789999999999999999999    654    66655

>d1tsja_ d.32.1.7 (A:) Hypothetical protein MW1090 {Staphylococcus aureus [TaxId: 1280]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: 3-demethylubiquinone-9 3-methyltransferase
domain: Hypothetical protein MW1090
species: Staphylococcus aureus [TaxId: 1280]

Probab=98.41  E-value=2.4e-06  Score=60.81  Aligned_cols=112  Identities=13%  Similarity=0.070  Sum_probs=64.6

Q ss_pred             eeeC-CchhhHHHHHHhcCCeeeeec-c------CcccceeeeeeccCCCCcceEEEEeEecCceeeccCceeeEEEEEe
Q 022831          159 LRVG-DLGRSIKFYEKALGMKLLRTI-D------SPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAIST  230 (291)
Q Consensus       159 l~v~-D~~~~~~Fy~~~lG~~~~~~~-~------~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~~hia~~v  230 (291)
                      |..+ |.+++.+||+++||-...... .      ..++......+..+    ...+-+....+..    +. -..+.+.+
T Consensus        10 l~f~g~a~eAi~FY~~vFg~~~v~~~~~~~~~~~~~~g~i~ha~l~i~----g~~~~~~d~~~~~----~~-~~s~~v~~   80 (129)
T d1tsja_          10 LMFNNQAEEAVKLYTSLFEDSEIITMAKYGENGPGDPGTVQHSIFTLN----GQVFMAIDANSGT----EL-PISLFVTV   80 (129)
T ss_dssp             EECSSCHHHHHHHHHHHSSSCEEEEEEECC-----CTTSEEEEEEEET----TEEEEEEC------------CCCEEEEC
T ss_pred             EEECCCHHHHHHHHHHHcCCcEEEEEEecCCCCCCCCCcEEEEEEEEC----CEEEEeecCCCCC----CC-CEEEEecc
Confidence            5554 899999999999975433321 1      11222222223322    1233332211111    11 13466777


Q ss_pred             cChHHHHHHHHHHHHhhCCeeeecccccCCCCceEEEEECCCCCeEEEEech
Q 022831          231 DDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNE  282 (291)
Q Consensus       231 ~di~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~  282 (291)
                      ++.+++.+..+.  .+.|+++..++.+.++ +.++..++||.|+.|.|..++
T Consensus        81 ~~~~e~~~~~~~--L~~gg~v~~p~~~~~~-g~~~g~v~D~fGv~W~i~~pe  129 (129)
T d1tsja_          81 KDTIEMERLFNG--LKDEGAILMPKTNMPP-YREFAWVQDKFGVSFQLALPE  129 (129)
T ss_dssp             SSHHHHHHHHHH--HHTTCEEEEEEEEETT-EEEEEEEECTTSCEEEEEECC
T ss_pred             CCHHHHHHHHHH--hccCCEEecccccccc-cceEEEEECCCCCEEEEeCCC
Confidence            775554332211  3567799999988887 578999999999999998764

>d1tsja_ d.32.1.7 (A:) Hypothetical protein MW1090 {Staphylococcus aureus [TaxId: 1280]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: 3-demethylubiquinone-9 3-methyltransferase
domain: Hypothetical protein MW1090
species: Staphylococcus aureus [TaxId: 1280]

Probab=98.19  E-value=3.3e-05  Score=54.63  Aligned_cols=109  Identities=15%  Similarity=0.175  Sum_probs=66.7

Q ss_pred             EEEeC-CHHHHHHHHHHhcCCEEEEEe-------ccCCCceeeEEeeccCCCcceEEEeeecCCCCcccCCCCceEEEEE
Q 022831           28 VYRVG-DLDRTIKYYTECFGMELLRKR-------DVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHLAIA   99 (291)
Q Consensus        28 ~l~v~-d~~~~~~FY~~~lG~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~g~~~~~i~~~   99 (291)
                      -|... |.+++.+||+++||-+.+.+.       ...++...++-+.++.  ..+.+  ....+.  ..   .-.++++.
T Consensus         9 yl~f~g~a~eAi~FY~~vFg~~~v~~~~~~~~~~~~~~g~i~ha~l~i~g--~~~~~--~d~~~~--~~---~~~s~~v~   79 (129)
T d1tsja_           9 FLMFNNQAEEAVKLYTSLFEDSEIITMAKYGENGPGDPGTVQHSIFTLNG--QVFMA--IDANSG--TE---LPISLFVT   79 (129)
T ss_dssp             EEECSSCHHHHHHHHHHHSSSCEEEEEEECC-----CTTSEEEEEEEETT--EEEEE--EC------------CCCEEEE
T ss_pred             EEEECCCHHHHHHHHHHHcCCcEEEEEEecCCCCCCCCCcEEEEEEEECC--EEEEe--ecCCCC--CC---CCEEEEec
Confidence            44454 999999999999965433221       1123445555566542  22222  211111  11   12357788


Q ss_pred             ECCHHHH---HHHHHHcCCeeeeCCccCCCCceEEEEEECCCCcEEEEEec
Q 022831          100 TEDVYKM---VENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFELIQR  147 (291)
Q Consensus       100 v~d~~~~---~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dP~G~~iel~~~  147 (291)
                      +++.+++   .++| +.|+++..++.+.++|.+ +..++||.|+.|.|..+
T Consensus        80 ~~~~~e~~~~~~~L-~~gg~v~~p~~~~~~g~~-~g~v~D~fGv~W~i~~p  128 (129)
T d1tsja_          80 VKDTIEMERLFNGL-KDEGAILMPKTNMPPYRE-FAWVQDKFGVSFQLALP  128 (129)
T ss_dssp             CSSHHHHHHHHHHH-HTTCEEEEEEEEETTEEE-EEEEECTTSCEEEEEEC
T ss_pred             cCCHHHHHHHHHHh-ccCCEEecccccccccce-EEEEECCCCCEEEEeCC
Confidence            8886654   4455 467798888888888765 58899999999998653

>d1u69a_ d.32.1.7 (A:) Hypothetical protein PA2721 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: 3-demethylubiquinone-9 3-methyltransferase
domain: Hypothetical protein PA2721
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=96.97  E-value=0.013  Score=41.99  Aligned_cols=128  Identities=13%  Similarity=0.127  Sum_probs=75.4

Q ss_pred             EEeCCHHHHHHHHHHhcCC-EEEEEe-------ccCCCceeeEEeeccCCCcceEEEeeecCCCCcccCCCCceEEEEEE
Q 022831           29 YRVGDLDRTIKYYTECFGM-ELLRKR-------DVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHLAIAT  100 (291)
Q Consensus        29 l~v~d~~~~~~FY~~~lG~-~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~g~~~~~i~~~v  100 (291)
                      +.-.|.+++.+||+++||- ++....       ..+.+...++.+.++  +..+.  ...  ....+..++ ..++++.+
T Consensus         8 ~F~Gna~EAl~FY~~vFg~~~i~~~~~~~~~~p~~~~~~Vmha~l~i~--g~~lm--~sD--~~~~~~~~~-~~sl~l~~   80 (156)
T d1u69a_           8 WYDSAALEAATFYAETFPDSAVLAVHRAPGDYPSGKEGDVLTVEFRVM--GIPCL--GLN--GGPAFRHSE-AFSFQVAT   80 (156)
T ss_dssp             EESSCHHHHHHHHHHHSTTEEEEEEEECSSCBTTBCTTSEEEEEEEET--TEEEE--EEE--CCTTCCCCT-TEEEEEEE
T ss_pred             eECCcHHHHHHHHHHHcCCCEEeEEEecCCCCCCCCCCcEEEEEEEEC--CeEEE--eec--CCCCCCCCC-CeEEEEec
Confidence            4447999999999999964 343321       112234445556554  22222  222  222333343 35788888


Q ss_pred             CC---HHHHHHHHHHcCCeeeeCCccCCCCceEEEEEECCCCcEEEEEecCCCCCCceeeeeeeCCchhhHHHHHHhcCC
Q 022831          101 ED---VYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFELIQRGPTPEPLCQVMLRVGDLGRSIKFYEKALGM  177 (291)
Q Consensus       101 ~d---~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dP~G~~iel~~~~~~~~~~~hv~l~v~D~~~~~~Fy~~~lG~  177 (291)
                      +|   +++++++|.+.| ++..     +.     .+++|.-|+.|.|+.+.      ..-.+...|.+++.+-++..+.+
T Consensus        81 d~~eE~d~~f~~LsegG-~~~~-----~~-----G~v~DkFGV~Wqi~~~~------~~~~~~~~~~~~~~~~~~a~~~m  143 (156)
T d1u69a_          81 DDQAETDRLWNAIVDNG-GEES-----AC-----GWCRDKWGISWQITPRV------LSEAIASPDRAAARRAFEAMMTM  143 (156)
T ss_dssp             SSHHHHHHHHHHHHHTT-CEEC-----ST-----TEEECTTSCEEEEEEHH------HHHHHTCSSHHHHHHHHHHHTTC
T ss_pred             CCHHHHHHHHHHHhccC-CCCC-----CC-----eEEECCCCCEEEeChHH------HHHHhcCCCHHHHHHHHHHHHcC
Confidence            87   555677777766 3222     12     25899999999998542      11123345677777878777777


Q ss_pred             eee
Q 022831          178 KLL  180 (291)
Q Consensus       178 ~~~  180 (291)
                      ...
T Consensus       144 ~k~  146 (156)
T d1u69a_         144 GRI  146 (156)
T ss_dssp             SSC
T ss_pred             cCe
Confidence            643

>d1u69a_ d.32.1.7 (A:) Hypothetical protein PA2721 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: 3-demethylubiquinone-9 3-methyltransferase
domain: Hypothetical protein PA2721
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=96.72  E-value=0.016  Score=41.49  Aligned_cols=104  Identities=11%  Similarity=0.001  Sum_probs=54.1

Q ss_pred             eeeCCchhhHHHHHHhcCCeeeeec---cC-----cccceeeeeeccCCCCcceEEEEeEecCceeeccCceeeEEEEEe
Q 022831          159 LRVGDLGRSIKFYEKALGMKLLRTI---DS-----PELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAIST  230 (291)
Q Consensus       159 l~v~D~~~~~~Fy~~~lG~~~~~~~---~~-----~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~~hia~~v  230 (291)
                      +--.+.+++.+||.++||-......   +.     +.+......+..+    ...+.....  ..+++.+++ .++.+.+
T Consensus         8 ~F~Gna~EAl~FY~~vFg~~~i~~~~~~~~~~p~~~~~~Vmha~l~i~----g~~lm~sD~--~~~~~~~~~-~sl~l~~   80 (156)
T d1u69a_           8 WYDSAALEAATFYAETFPDSAVLAVHRAPGDYPSGKEGDVLTVEFRVM----GIPCLGLNG--GPAFRHSEA-FSFQVAT   80 (156)
T ss_dssp             EESSCHHHHHHHHHHHSTTEEEEEEEECSSCBTTBCTTSEEEEEEEET----TEEEEEEEC--CTTCCCCTT-EEEEEEE
T ss_pred             eECCcHHHHHHHHHHHcCCCEEeEEEecCCCCCCCCCCcEEEEEEEEC----CeEEEeecC--CCCCCCCCC-eEEEEec
Confidence            3447899999999999964322221   11     1122222223322    122222221  112233344 5688888


Q ss_pred             cChHHHHHHHHHHHHhhCCeeeecccccCCCCceEEEEECCCCCeEEEEec
Q 022831          231 DDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDN  281 (291)
Q Consensus       231 ~di~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iel~~~  281 (291)
                      +|.+++-+..+. |.+.| ++..     +     +.+++|+.|+.|.|+-+
T Consensus        81 d~~eE~d~~f~~-LsegG-~~~~-----~-----~G~v~DkFGV~Wqi~~~  119 (156)
T d1u69a_          81 DDQAETDRLWNA-IVDNG-GEES-----A-----CGWCRDKWGISWQITPR  119 (156)
T ss_dssp             SSHHHHHHHHHH-HHHTT-CEEC-----S-----TTEEECTTSCEEEEEEH
T ss_pred             CCHHHHHHHHHH-HhccC-CCCC-----C-----CeEEECCCCCEEEeChH
Confidence            874444333322 14444 3432     2     23699999999999976